#transId geneId source chrom start end strand proteinId geneName transcriptName geneType transcriptType MGP_CBAJ_T0011938.1 MGP_CBAJ_G0010050.1 mouse_genomes_project 1 67681953 67682321 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011741.1 MGP_CBAJ_G0009853.1 mouse_genomes_project 1 4995193 4998583 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000551.1 MGP_CBAJ_G0000493.1 mouse_genomes_project 1 118798263 118800512 + TEC TEC MGP_CBAJ_T0011738.1 MGP_CBAJ_G0009850.1 mouse_genomes_project 1 4647634 4648022 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000577.1 MGP_CBAJ_G0000519.1 mouse_genomes_project 1 140085435 140085978 + TEC TEC MGP_CBAJ_T0020181.1 MGP_CBAJ_G0015882.1 mouse_genomes_project 1 80119979 80149904 + MGP_CBAJ_P0020181 Rufy4 protein_coding protein_coding MGP_CBAJ_T0020182.1 MGP_CBAJ_G0015882.1 mouse_genomes_project 1 80120017 80149454 + MGP_CBAJ_P0020182 Rufy4 protein_coding protein_coding MGP_CBAJ_T0020691.1 MGP_CBAJ_G0015975.1 mouse_genomes_project 1 92972937 93030278 + MGP_CBAJ_P0020691 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020692.1 MGP_CBAJ_G0015975.1 mouse_genomes_project 1 92972979 93043930 + MGP_CBAJ_P0020692 protein_coding protein_coding MGP_CBAJ_T0020693.1 MGP_CBAJ_G0015975.1 mouse_genomes_project 1 93008140 93013464 + protein_coding retained_intron MGP_CBAJ_T0020694.1 MGP_CBAJ_G0015975.1 mouse_genomes_project 1 93027848 93033607 + protein_coding retained_intron MGP_CBAJ_T0020695.1 MGP_CBAJ_G0015975.1 mouse_genomes_project 1 93028206 93043344 + MGP_CBAJ_P0020695 protein_coding protein_coding MGP_CBAJ_T0020696.1 MGP_CBAJ_G0015975.1 mouse_genomes_project 1 93037381 93041933 + MGP_CBAJ_P0020696 protein_coding protein_coding MGP_CBAJ_T0009391.1 MGP_CBAJ_G0007529.1 mouse_genomes_project 1 89784274 89784327 + Gm22396 miRNA miRNA MGP_CBAJ_T0000759.1 MGP_CBAJ_G0000697.1 mouse_genomes_project 1 212511738 212512748 - TEC TEC MGP_CBAJ_T0021817.1 MGP_CBAJ_G0016223.1 mouse_genomes_project 1 146734328 146747343 + MGP_CBAJ_P0021817 Golt1a protein_coding protein_coding MGP_CBAJ_T0021822.1 MGP_CBAJ_G0016223.1 mouse_genomes_project 1 146734418 146745367 + MGP_CBAJ_P0021822 Golt1a protein_coding protein_coding MGP_CBAJ_T0020697.1 MGP_CBAJ_G0015976.1 mouse_genomes_project 1 93052441 93072134 - protein_coding processed_transcript MGP_CBAJ_T0020698.1 MGP_CBAJ_G0015976.1 mouse_genomes_project 1 93052441 93115786 - MGP_CBAJ_P0020698 protein_coding protein_coding MGP_CBAJ_T0020699.1 MGP_CBAJ_G0015976.1 mouse_genomes_project 1 93053041 93072182 - MGP_CBAJ_P0020699 protein_coding protein_coding MGP_CBAJ_T0020700.1 MGP_CBAJ_G0015976.1 mouse_genomes_project 1 93053044 93072134 - MGP_CBAJ_P0020700 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020701.1 MGP_CBAJ_G0015976.1 mouse_genomes_project 1 93053442 93072112 - protein_coding processed_transcript MGP_CBAJ_T0020702.1 MGP_CBAJ_G0015976.1 mouse_genomes_project 1 93062208 93072119 - protein_coding processed_transcript MGP_CBAJ_T0011834.1 MGP_CBAJ_G0009946.1 mouse_genomes_project 1 35384031 35384323 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0019490.1 MGP_CBAJ_G0015752.1 mouse_genomes_project 1 55808948 55879091 - MGP_CBAJ_P0019490 Mfsd6 protein_coding protein_coding MGP_CBAJ_T0019491.1 MGP_CBAJ_G0015752.1 mouse_genomes_project 1 55808960 55878713 - MGP_CBAJ_P0019491 Mfsd6 protein_coding protein_coding MGP_CBAJ_T0019492.1 MGP_CBAJ_G0015752.1 mouse_genomes_project 1 55810097 55812961 - Mfsd6 protein_coding retained_intron MGP_CBAJ_T0019493.1 MGP_CBAJ_G0015752.1 mouse_genomes_project 1 55812648 55879091 - MGP_CBAJ_P0019493 Mfsd6 protein_coding protein_coding MGP_CBAJ_T0019494.1 MGP_CBAJ_G0015752.1 mouse_genomes_project 1 55813565 55824457 - Mfsd6 protein_coding processed_transcript MGP_CBAJ_T0019495.1 MGP_CBAJ_G0015752.1 mouse_genomes_project 1 55830728 55878987 - Mfsd6 protein_coding retained_intron MGP_CBAJ_T0099742.1 MGP_CBAJ_G0037997.1 mouse_genomes_project 1 19858715 19858846 - Gm24171 snoRNA snoRNA MGP_CBAJ_T0019166.1 MGP_CBAJ_G0015690.1 mouse_genomes_project 1 39293028 39305298 - MGP_CBAJ_P0019166 Txndc9 protein_coding protein_coding MGP_CBAJ_T0019167.1 MGP_CBAJ_G0015690.1 mouse_genomes_project 1 39295232 39305876 - MGP_CBAJ_P0019167 Txndc9 protein_coding protein_coding MGP_CBAJ_T0019168.1 MGP_CBAJ_G0015690.1 mouse_genomes_project 1 39295232 39305226 - MGP_CBAJ_P0019168 Txndc9 protein_coding protein_coding MGP_CBAJ_T0019169.1 MGP_CBAJ_G0015690.1 mouse_genomes_project 1 39295234 39305207 - Txndc9 protein_coding retained_intron MGP_CBAJ_T0019170.1 MGP_CBAJ_G0015690.1 mouse_genomes_project 1 39295467 39303835 - MGP_CBAJ_P0019170 Txndc9 protein_coding protein_coding MGP_CBAJ_T0019171.1 MGP_CBAJ_G0015690.1 mouse_genomes_project 1 39295470 39305599 - MGP_CBAJ_P0019171 Txndc9 protein_coding protein_coding MGP_CBAJ_T0019172.1 MGP_CBAJ_G0015690.1 mouse_genomes_project 1 39298102 39304641 - MGP_CBAJ_P0019172 Txndc9 protein_coding protein_coding MGP_CBAJ_T0019173.1 MGP_CBAJ_G0015690.1 mouse_genomes_project 1 39303898 39305245 - Txndc9 protein_coding retained_intron MGP_CBAJ_T0011133.1 MGP_CBAJ_G0009271.1 mouse_genomes_project 1 191058114 191058441 - Gm22383 misc_RNA misc_RNA MGP_CBAJ_T0018794.1 MGP_CBAJ_G0015619.1 mouse_genomes_project 1 19941294 20031957 - MGP_CBAJ_P0018794 Tram2 protein_coding protein_coding MGP_CBAJ_T0018795.1 MGP_CBAJ_G0015619.1 mouse_genomes_project 1 19949309 19994618 - Tram2 protein_coding processed_transcript MGP_CBAJ_T0097878.1 MGP_CBAJ_G0036151.1 mouse_genomes_project 1 152046950 152047070 - Gm23782 rRNA rRNA MGP_CBAJ_T0020728.1 MGP_CBAJ_G0015983.1 mouse_genomes_project 1 93444413 93450796 + Psmd1 protein_coding retained_intron MGP_CBAJ_T0020729.1 MGP_CBAJ_G0015983.1 mouse_genomes_project 1 93444413 93451680 + Psmd1 protein_coding processed_transcript MGP_CBAJ_T0020730.1 MGP_CBAJ_G0015983.1 mouse_genomes_project 1 93444645 93516723 + MGP_CBAJ_P0020730 Psmd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020731.1 MGP_CBAJ_G0015983.1 mouse_genomes_project 1 93444645 93523129 + MGP_CBAJ_P0020731 Psmd1 protein_coding protein_coding MGP_CBAJ_T0020732.1 MGP_CBAJ_G0015983.1 mouse_genomes_project 1 93444667 93447689 + Psmd1 protein_coding retained_intron MGP_CBAJ_T0020733.1 MGP_CBAJ_G0015983.1 mouse_genomes_project 1 93444718 93452304 + Psmd1 protein_coding retained_intron MGP_CBAJ_T0020734.1 MGP_CBAJ_G0015983.1 mouse_genomes_project 1 93444897 93459701 + Psmd1 protein_coding processed_transcript MGP_CBAJ_T0020737.1 MGP_CBAJ_G0015983.1 mouse_genomes_project 1 93494688 93516774 + Psmd1 protein_coding processed_transcript MGP_CBAJ_T0020738.1 MGP_CBAJ_G0015983.1 mouse_genomes_project 1 93511784 93516741 + Psmd1 protein_coding retained_intron MGP_CBAJ_T0098559.1 MGP_CBAJ_G0036814.1 mouse_genomes_project 1 131341068 131341172 + Gm25322 snRNA snRNA MGP_CBAJ_T0019886.1 MGP_CBAJ_G0015824.1 mouse_genomes_project 1 66160778 66652239 + Pard3b protein_coding processed_transcript MGP_CBAJ_T0019887.1 MGP_CBAJ_G0015824.1 mouse_genomes_project 1 66160778 67256704 + MGP_CBAJ_P0019887 Pard3b protein_coding protein_coding MGP_CBAJ_T0019888.1 MGP_CBAJ_G0015824.1 mouse_genomes_project 1 66160829 66308365 + Pard3b protein_coding retained_intron MGP_CBAJ_T0019889.1 MGP_CBAJ_G0015824.1 mouse_genomes_project 1 66160840 66753716 + Pard3b protein_coding retained_intron MGP_CBAJ_T0019890.1 MGP_CBAJ_G0015824.1 mouse_genomes_project 1 66161197 67252369 + MGP_CBAJ_P0019890 Pard3b protein_coding protein_coding MGP_CBAJ_T0019891.1 MGP_CBAJ_G0015824.1 mouse_genomes_project 1 66161197 67256704 + MGP_CBAJ_P0019891 Pard3b protein_coding protein_coding MGP_CBAJ_T0023288.1 MGP_CBAJ_G0016525.1 mouse_genomes_project 1 190697402 190707259 + MGP_CBAJ_P0023288 Pigm protein_coding protein_coding MGP_CBAJ_T0020840.1 MGP_CBAJ_G0016007.1 mouse_genomes_project 1 95064687 95069898 + MGP_CBAJ_P0020840 3110079O15Rik protein_coding protein_coding MGP_CBAJ_T0020841.1 MGP_CBAJ_G0016007.1 mouse_genomes_project 1 95066955 95069874 + 3110079O15Rik protein_coding processed_transcript MGP_CBAJ_T0009444.1 MGP_CBAJ_G0007582.1 mouse_genomes_project 1 205564454 205564566 + Mir215 miRNA miRNA MGP_CBAJ_T0019987.1 MGP_CBAJ_G0015843.1 mouse_genomes_project 1 69972089 69974788 - MGP_CBAJ_P0019987 protein_coding protein_coding MGP_CBAJ_T0002841.1 MGP_CBAJ_G0002677.1 mouse_genomes_project 1 166334149 166384264 + antisense antisense MGP_CBAJ_T0002842.1 MGP_CBAJ_G0002677.1 mouse_genomes_project 1 166334182 166513955 + antisense antisense MGP_CBAJ_T0002911.1 MGP_CBAJ_G0002734.1 mouse_genomes_project 1 208126377 208172612 - Gm36388 antisense antisense MGP_CBAJ_T0021305.1 MGP_CBAJ_G0016109.1 mouse_genomes_project 1 116109401 116155656 + MGP_CBAJ_P0021305 Zcchc2 protein_coding protein_coding MGP_CBAJ_T0021306.1 MGP_CBAJ_G0016109.1 mouse_genomes_project 1 116112178 116155649 + MGP_CBAJ_P0021306 Zcchc2 protein_coding protein_coding MGP_CBAJ_T0021307.1 MGP_CBAJ_G0016109.1 mouse_genomes_project 1 116125607 116154030 + MGP_CBAJ_P0021307 Zcchc2 protein_coding protein_coding MGP_CBAJ_T0021308.1 MGP_CBAJ_G0016109.1 mouse_genomes_project 1 116125622 116149083 + MGP_CBAJ_P0021308 Zcchc2 protein_coding protein_coding MGP_CBAJ_T0021309.1 MGP_CBAJ_G0016109.1 mouse_genomes_project 1 116133228 116144745 + MGP_CBAJ_P0021309 Zcchc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0000321.1 MGP_CBAJ_G0000266.1 mouse_genomes_project 1 449953 452186 - TEC TEC MGP_CBAJ_T0012158.1 MGP_CBAJ_G0010270.1 mouse_genomes_project 1 172552584 172552784 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009399.1 MGP_CBAJ_G0007537.1 mouse_genomes_project 1 100755812 100755872 - Mir6900 miRNA miRNA MGP_CBAJ_T0000537.1 MGP_CBAJ_G0000479.1 mouse_genomes_project 1 104460243 104461978 - TEC TEC MGP_CBAJ_T0016796.1 MGP_CBAJ_G0014858.1 mouse_genomes_project 1 176422186 176503411 + Gm10530 processed_transcript sense_intronic MGP_CBAJ_T0016797.1 MGP_CBAJ_G0014858.1 mouse_genomes_project 1 176500196 176503411 + Gm10530 processed_transcript lincRNA MGP_CBAJ_T0019969.1 MGP_CBAJ_G0015839.1 mouse_genomes_project 1 69568373 69606898 + MGP_CBAJ_P0019969 Ccnyl1 protein_coding protein_coding MGP_CBAJ_T0019970.1 MGP_CBAJ_G0015839.1 mouse_genomes_project 1 69568740 69605200 + MGP_CBAJ_P0019970 Ccnyl1 protein_coding protein_coding MGP_CBAJ_T0019971.1 MGP_CBAJ_G0015839.1 mouse_genomes_project 1 69569101 69591899 + MGP_CBAJ_P0019971 Ccnyl1 protein_coding protein_coding MGP_CBAJ_T0019972.1 MGP_CBAJ_G0015839.1 mouse_genomes_project 1 69569263 69606894 + MGP_CBAJ_P0019972 Ccnyl1 protein_coding protein_coding MGP_CBAJ_T0005666.1 MGP_CBAJ_G0004753.1 mouse_genomes_project 1 66133716 66143126 - lincRNA lincRNA MGP_CBAJ_T0021802.1 MGP_CBAJ_G0016220.1 mouse_genomes_project 1 146451747 146475860 + MGP_CBAJ_P0021802 Pik3c2b protein_coding protein_coding MGP_CBAJ_T0021803.1 MGP_CBAJ_G0016220.1 mouse_genomes_project 1 146452086 146476668 + Pik3c2b protein_coding retained_intron MGP_CBAJ_T0021804.1 MGP_CBAJ_G0016220.1 mouse_genomes_project 1 146452086 146496951 + Pik3c2b protein_coding retained_intron MGP_CBAJ_T0021805.1 MGP_CBAJ_G0016220.1 mouse_genomes_project 1 146452086 146524495 + MGP_CBAJ_P0021805 Pik3c2b protein_coding protein_coding MGP_CBAJ_T0098536.1 MGP_CBAJ_G0036791.1 mouse_genomes_project 1 71497525 71497676 + Gm25411 snRNA snRNA MGP_CBAJ_T0002701.1 MGP_CBAJ_G0002570.1 mouse_genomes_project 1 20032831 20034456 + Gm28287 antisense antisense MGP_CBAJ_T0005888.1 MGP_CBAJ_G0004928.1 mouse_genomes_project 1 182390478 182392363 + 1700029M03Rik lincRNA lincRNA MGP_CBAJ_T0005889.1 MGP_CBAJ_G0004928.1 mouse_genomes_project 1 182390480 182390960 + 1700029M03Rik lincRNA lincRNA MGP_CBAJ_T0018543.1 MGP_CBAJ_G0015569.1 mouse_genomes_project 1 7269557 7303336 + MGP_CBAJ_P0018543 Adhfe1 protein_coding protein_coding MGP_CBAJ_T0018544.1 MGP_CBAJ_G0015569.1 mouse_genomes_project 1 7269664 7302268 + MGP_CBAJ_P0018544 Adhfe1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018545.1 MGP_CBAJ_G0015569.1 mouse_genomes_project 1 7269701 7275276 + MGP_CBAJ_P0018545 Adhfe1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018546.1 MGP_CBAJ_G0015569.1 mouse_genomes_project 1 7269716 7277157 + MGP_CBAJ_P0018546 Adhfe1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018547.1 MGP_CBAJ_G0015569.1 mouse_genomes_project 1 7269728 7306038 + MGP_CBAJ_P0018547 Adhfe1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019821.1 MGP_CBAJ_G0015814.1 mouse_genomes_project 1 64291833 64300271 - Ica1l protein_coding processed_transcript MGP_CBAJ_T0019822.1 MGP_CBAJ_G0015814.1 mouse_genomes_project 1 64298411 64361188 - MGP_CBAJ_P0019822 Ica1l protein_coding protein_coding MGP_CBAJ_T0019823.1 MGP_CBAJ_G0015814.1 mouse_genomes_project 1 64298418 64361223 - MGP_CBAJ_P0019823 Ica1l protein_coding protein_coding MGP_CBAJ_T0019824.1 MGP_CBAJ_G0015814.1 mouse_genomes_project 1 64300467 64339758 - MGP_CBAJ_P0019824 Ica1l protein_coding protein_coding MGP_CBAJ_T0019825.1 MGP_CBAJ_G0015814.1 mouse_genomes_project 1 64326776 64334144 - Ica1l protein_coding retained_intron MGP_CBAJ_T0019826.1 MGP_CBAJ_G0015814.1 mouse_genomes_project 1 64332312 64361285 - Ica1l protein_coding processed_transcript MGP_CBAJ_T0098243.1 MGP_CBAJ_G0036515.1 mouse_genomes_project 1 158571074 158574739 + Gm29170 sense_intronic sense_intronic MGP_CBAJ_T0002840.1 MGP_CBAJ_G0002676.1 mouse_genomes_project 1 165998038 166035662 - antisense antisense MGP_CBAJ_T0022422.1 MGP_CBAJ_G0016350.1 mouse_genomes_project 1 171353807 171357083 - MGP_CBAJ_P0022422 Ier5 protein_coding protein_coding MGP_CBAJ_T0101495.1 MGP_CBAJ_G0039527.1 mouse_genomes_project 1 191542179 191542431 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0021196.1 MGP_CBAJ_G0016086.1 mouse_genomes_project 1 102156613 102168938 + MGP_CBAJ_P0021196 Bok protein_coding protein_coding MGP_CBAJ_T0021197.1 MGP_CBAJ_G0016086.1 mouse_genomes_project 1 102156655 102168384 + MGP_CBAJ_P0021197 Bok protein_coding protein_coding MGP_CBAJ_T0021198.1 MGP_CBAJ_G0016086.1 mouse_genomes_project 1 102157216 102165005 + MGP_CBAJ_P0021198 Bok protein_coding protein_coding MGP_CBAJ_T0021199.1 MGP_CBAJ_G0016086.1 mouse_genomes_project 1 102160159 102168643 + MGP_CBAJ_P0021199 Bok protein_coding protein_coding MGP_CBAJ_T0021200.1 MGP_CBAJ_G0016086.1 mouse_genomes_project 1 102164750 102168629 + Bok protein_coding processed_transcript MGP_CBAJ_T0098595.1 MGP_CBAJ_G0036850.1 mouse_genomes_project 1 204730481 204730579 - Gm23349 snRNA snRNA MGP_CBAJ_T0023574.1 MGP_CBAJ_G0016606.1 mouse_genomes_project 1 200212849 200223010 + MGP_CBAJ_P0023574 Parp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023575.1 MGP_CBAJ_G0016606.1 mouse_genomes_project 1 200212854 200244879 + MGP_CBAJ_P0023575 Parp1 protein_coding protein_coding MGP_CBAJ_T0023576.1 MGP_CBAJ_G0016606.1 mouse_genomes_project 1 200213151 200221457 + MGP_CBAJ_P0023576 Parp1 protein_coding protein_coding MGP_CBAJ_T0023577.1 MGP_CBAJ_G0016606.1 mouse_genomes_project 1 200233307 200235491 + Parp1 protein_coding retained_intron MGP_CBAJ_T0023578.1 MGP_CBAJ_G0016606.1 mouse_genomes_project 1 200241849 200243821 + Parp1 protein_coding retained_intron MGP_CBAJ_T0023579.1 MGP_CBAJ_G0016606.1 mouse_genomes_project 1 200242460 200243731 + Parp1 protein_coding retained_intron MGP_CBAJ_T0023580.1 MGP_CBAJ_G0016606.1 mouse_genomes_project 1 200242612 200244877 + MGP_CBAJ_P0023580 Parp1 protein_coding protein_coding MGP_CBAJ_T0021256.1 MGP_CBAJ_G0016101.1 mouse_genomes_project 1 106907794 106969447 - MGP_CBAJ_P0021256 Pam protein_coding protein_coding MGP_CBAJ_T0021257.1 MGP_CBAJ_G0016101.1 mouse_genomes_project 1 106947301 107252993 - MGP_CBAJ_P0021257 Pam protein_coding protein_coding MGP_CBAJ_T0021258.1 MGP_CBAJ_G0016101.1 mouse_genomes_project 1 106947302 107253004 - MGP_CBAJ_P0021258 Pam protein_coding protein_coding MGP_CBAJ_T0021259.1 MGP_CBAJ_G0016101.1 mouse_genomes_project 1 106947307 107113407 - MGP_CBAJ_P0021259 Pam protein_coding protein_coding MGP_CBAJ_T0021260.1 MGP_CBAJ_G0016101.1 mouse_genomes_project 1 106947927 106969025 - MGP_CBAJ_P0021260 Pam protein_coding protein_coding MGP_CBAJ_T0021261.1 MGP_CBAJ_G0016101.1 mouse_genomes_project 1 106948187 106963283 - Pam protein_coding retained_intron MGP_CBAJ_T0021262.1 MGP_CBAJ_G0016101.1 mouse_genomes_project 1 106954295 106969517 - Pam protein_coding retained_intron MGP_CBAJ_T0021263.1 MGP_CBAJ_G0016101.1 mouse_genomes_project 1 106966167 106969027 - Pam protein_coding retained_intron MGP_CBAJ_T0021264.1 MGP_CBAJ_G0016101.1 mouse_genomes_project 1 106981560 106993100 - Pam protein_coding retained_intron MGP_CBAJ_T0021265.1 MGP_CBAJ_G0016101.1 mouse_genomes_project 1 106983269 107021013 - MGP_CBAJ_P0021265 Pam protein_coding protein_coding MGP_CBAJ_T0021266.1 MGP_CBAJ_G0016101.1 mouse_genomes_project 1 107061042 107113220 - Pam protein_coding retained_intron MGP_CBAJ_T0021267.1 MGP_CBAJ_G0016101.1 mouse_genomes_project 1 107087837 107113396 - Pam protein_coding processed_transcript MGP_CBAJ_T0021268.1 MGP_CBAJ_G0016101.1 mouse_genomes_project 1 107204050 107207944 - Pam protein_coding retained_intron MGP_CBAJ_T0021269.1 MGP_CBAJ_G0016101.1 mouse_genomes_project 1 107208033 107253018 - Pam protein_coding processed_transcript MGP_CBAJ_T0012067.1 MGP_CBAJ_G0010179.1 mouse_genomes_project 1 129907950 129909113 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0020154.1 MGP_CBAJ_G0015878.1 mouse_genomes_project 1 78700509 78733924 + MGP_CBAJ_P0020154 Igfbp2 protein_coding protein_coding MGP_CBAJ_T0020155.1 MGP_CBAJ_G0015878.1 mouse_genomes_project 1 78730143 78733593 + Igfbp2 protein_coding retained_intron MGP_CBAJ_T0012070.1 MGP_CBAJ_G0010182.1 mouse_genomes_project 1 130536983 130537302 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011138.1 MGP_CBAJ_G0009276.1 mouse_genomes_project 1 214079070 214079359 - Gm23583 misc_RNA misc_RNA MGP_CBAJ_T0020572.1 MGP_CBAJ_G0015950.1 mouse_genomes_project 1 86408129 86479031 - MGP_CBAJ_P0020572 Serpine2 protein_coding protein_coding MGP_CBAJ_T0020573.1 MGP_CBAJ_G0015950.1 mouse_genomes_project 1 86410809 86437474 - MGP_CBAJ_P0020573 Serpine2 protein_coding protein_coding MGP_CBAJ_T0020574.1 MGP_CBAJ_G0015950.1 mouse_genomes_project 1 86417452 86481504 - MGP_CBAJ_P0020574 Serpine2 protein_coding protein_coding MGP_CBAJ_T0020575.1 MGP_CBAJ_G0015950.1 mouse_genomes_project 1 86431274 86479031 - Serpine2 protein_coding retained_intron MGP_CBAJ_T0020576.1 MGP_CBAJ_G0015950.1 mouse_genomes_project 1 86433072 86436456 - Serpine2 protein_coding retained_intron MGP_CBAJ_T0020577.1 MGP_CBAJ_G0015950.1 mouse_genomes_project 1 86477841 86478970 - Serpine2 protein_coding retained_intron MGP_CBAJ_T0000638.1 MGP_CBAJ_G0000578.1 mouse_genomes_project 1 162522220 162523397 - TEC TEC MGP_CBAJ_T0000671.1 MGP_CBAJ_G0000611.1 mouse_genomes_project 1 176006990 176009854 + TEC TEC MGP_CBAJ_T0018890.1 MGP_CBAJ_G0015641.1 mouse_genomes_project 1 31589329 31627904 + MGP_CBAJ_P0018890 Lgsn protein_coding protein_coding MGP_CBAJ_T0018891.1 MGP_CBAJ_G0015641.1 mouse_genomes_project 1 31610278 31627904 + MGP_CBAJ_P0018891 Lgsn protein_coding protein_coding MGP_CBAJ_T0021876.1 MGP_CBAJ_G0016239.1 mouse_genomes_project 1 147660486 147664428 - MGP_CBAJ_P0021876 Btg2 protein_coding protein_coding MGP_CBAJ_T0099734.1 MGP_CBAJ_G0037989.1 mouse_genomes_project 1 11932055 11932186 - Gm26273 snoRNA snoRNA MGP_CBAJ_T0023355.1 MGP_CBAJ_G0016548.1 mouse_genomes_project 1 192190128 192199167 + MGP_CBAJ_P0023355 BC094916 protein_coding protein_coding MGP_CBAJ_T0005837.1 MGP_CBAJ_G0004888.1 mouse_genomes_project 1 152026360 152029774 + A430106G13Rik lincRNA lincRNA MGP_CBAJ_T0016823.1 MGP_CBAJ_G0014860.1 mouse_genomes_project 1 182280472 182290215 + Gm20743 processed_transcript lincRNA MGP_CBAJ_T0016824.1 MGP_CBAJ_G0014860.1 mouse_genomes_project 1 182280697 182363330 + Gm20743 processed_transcript antisense MGP_CBAJ_T0023745.1 MGP_CBAJ_G0016645.1 mouse_genomes_project 1 204993546 205028246 - MGP_CBAJ_P0023745 Marc2 protein_coding protein_coding MGP_CBAJ_T0023746.1 MGP_CBAJ_G0016645.1 mouse_genomes_project 1 204994156 205009848 - Marc2 protein_coding processed_transcript MGP_CBAJ_T0023747.1 MGP_CBAJ_G0016645.1 mouse_genomes_project 1 204994160 205005392 - Marc2 protein_coding retained_intron MGP_CBAJ_T0023748.1 MGP_CBAJ_G0016645.1 mouse_genomes_project 1 204994170 205009633 - Marc2 protein_coding processed_transcript MGP_CBAJ_T0023749.1 MGP_CBAJ_G0016645.1 mouse_genomes_project 1 204994172 204998839 - Marc2 protein_coding retained_intron MGP_CBAJ_T0023750.1 MGP_CBAJ_G0016645.1 mouse_genomes_project 1 204994238 205009623 - Marc2 protein_coding processed_transcript MGP_CBAJ_T0023751.1 MGP_CBAJ_G0016645.1 mouse_genomes_project 1 204998631 205028173 - Marc2 protein_coding processed_transcript MGP_CBAJ_T0023752.1 MGP_CBAJ_G0016645.1 mouse_genomes_project 1 205004739 205028816 - MGP_CBAJ_P0023752 Marc2 protein_coding protein_coding MGP_CBAJ_T0023753.1 MGP_CBAJ_G0016645.1 mouse_genomes_project 1 205010150 205027936 - Marc2 protein_coding processed_transcript MGP_CBAJ_T0023754.1 MGP_CBAJ_G0016645.1 mouse_genomes_project 1 205011305 205028212 - Marc2 protein_coding retained_intron MGP_CBAJ_T0005776.1 MGP_CBAJ_G0004839.1 mouse_genomes_project 1 116548356 116550177 - A530053M12Rik lincRNA lincRNA MGP_CBAJ_T0023004.1 MGP_CBAJ_G0016463.1 mouse_genomes_project 1 187906894 187926601 - MGP_CBAJ_P0023004 Hsd17b7 protein_coding protein_coding MGP_CBAJ_T0023005.1 MGP_CBAJ_G0016463.1 mouse_genomes_project 1 187910235 187923083 - Hsd17b7 protein_coding processed_transcript MGP_CBAJ_T0023006.1 MGP_CBAJ_G0016463.1 mouse_genomes_project 1 187912860 187926601 - MGP_CBAJ_P0023006 Hsd17b7 protein_coding protein_coding MGP_CBAJ_T0023007.1 MGP_CBAJ_G0016463.1 mouse_genomes_project 1 187916812 187923509 - Hsd17b7 protein_coding processed_transcript MGP_CBAJ_T0018567.1 MGP_CBAJ_G0015574.1 mouse_genomes_project 1 7655481 7700938 + MGP_CBAJ_P0018567 Mcmdc2 protein_coding protein_coding MGP_CBAJ_T0018568.1 MGP_CBAJ_G0015574.1 mouse_genomes_project 1 7655481 7671263 + MGP_CBAJ_P0018568 Mcmdc2 protein_coding protein_coding MGP_CBAJ_T0018569.1 MGP_CBAJ_G0015574.1 mouse_genomes_project 1 7655511 7696655 + MGP_CBAJ_P0018569 Mcmdc2 protein_coding protein_coding MGP_CBAJ_T0018570.1 MGP_CBAJ_G0015574.1 mouse_genomes_project 1 7655513 7702068 + MGP_CBAJ_P0018570 Mcmdc2 protein_coding protein_coding MGP_CBAJ_T0018571.1 MGP_CBAJ_G0015574.1 mouse_genomes_project 1 7658180 7670004 + MGP_CBAJ_P0018571 Mcmdc2 protein_coding protein_coding MGP_CBAJ_T0012065.1 MGP_CBAJ_G0010177.1 mouse_genomes_project 1 128859298 128860574 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0022937.1 MGP_CBAJ_G0016444.1 mouse_genomes_project 1 183853199 183917272 + MGP_CBAJ_P0022937 Ildr2 protein_coding protein_coding MGP_CBAJ_T0022938.1 MGP_CBAJ_G0016444.1 mouse_genomes_project 1 183853253 183911719 + MGP_CBAJ_P0022938 Ildr2 protein_coding protein_coding MGP_CBAJ_T0022939.1 MGP_CBAJ_G0016444.1 mouse_genomes_project 1 183853253 183911719 + MGP_CBAJ_P0022939 Ildr2 protein_coding protein_coding MGP_CBAJ_T0022940.1 MGP_CBAJ_G0016444.1 mouse_genomes_project 1 183853253 183911719 + MGP_CBAJ_P0022940 Ildr2 protein_coding protein_coding MGP_CBAJ_T0022941.1 MGP_CBAJ_G0016444.1 mouse_genomes_project 1 183853253 183911719 + MGP_CBAJ_P0022941 Ildr2 protein_coding protein_coding MGP_CBAJ_T0022942.1 MGP_CBAJ_G0016444.1 mouse_genomes_project 1 183853253 183911719 + MGP_CBAJ_P0022942 Ildr2 protein_coding protein_coding MGP_CBAJ_T0022943.1 MGP_CBAJ_G0016444.1 mouse_genomes_project 1 183853253 183911719 + MGP_CBAJ_P0022943 Ildr2 protein_coding protein_coding MGP_CBAJ_T0011785.1 MGP_CBAJ_G0009897.1 mouse_genomes_project 1 19336346 19336899 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0024015.1 MGP_CBAJ_G0016696.1 mouse_genomes_project 1 214295857 214297097 + Lamb3 protein_coding retained_intron MGP_CBAJ_T0024016.1 MGP_CBAJ_G0016696.1 mouse_genomes_project 1 214295883 214449278 + MGP_CBAJ_P0024016 Lamb3 protein_coding protein_coding MGP_CBAJ_T0024017.1 MGP_CBAJ_G0016696.1 mouse_genomes_project 1 214295890 214431381 + MGP_CBAJ_P0024017 Lamb3 protein_coding protein_coding MGP_CBAJ_T0024018.1 MGP_CBAJ_G0016696.1 mouse_genomes_project 1 214295908 214348808 + Lamb3 protein_coding processed_transcript MGP_CBAJ_T0024026.1 MGP_CBAJ_G0016696.1 mouse_genomes_project 1 214371535 214380629 + Lamb3 protein_coding processed_transcript MGP_CBAJ_T0024028.1 MGP_CBAJ_G0016696.1 mouse_genomes_project 1 214407105 214449278 + MGP_CBAJ_P0024028 Lamb3 protein_coding protein_coding MGP_CBAJ_T0024029.1 MGP_CBAJ_G0016696.1 mouse_genomes_project 1 214407334 214408482 + Lamb3 protein_coding processed_transcript MGP_CBAJ_T0024030.1 MGP_CBAJ_G0016696.1 mouse_genomes_project 1 214407356 214449275 + MGP_CBAJ_P0024030 Lamb3 protein_coding protein_coding MGP_CBAJ_T0024031.1 MGP_CBAJ_G0016696.1 mouse_genomes_project 1 214426084 214431380 + Lamb3 protein_coding processed_transcript MGP_CBAJ_T0000643.1 MGP_CBAJ_G0000583.1 mouse_genomes_project 1 165010376 165012676 - TEC TEC MGP_CBAJ_T0023639.1 MGP_CBAJ_G0016621.1 mouse_genomes_project 1 201131414 201258622 + MGP_CBAJ_P0023639 Cnih3 protein_coding protein_coding MGP_CBAJ_T0023640.1 MGP_CBAJ_G0016621.1 mouse_genomes_project 1 201131416 201259352 + MGP_CBAJ_P0023640 Cnih3 protein_coding protein_coding MGP_CBAJ_T0023641.1 MGP_CBAJ_G0016621.1 mouse_genomes_project 1 201131984 201258000 + MGP_CBAJ_P0023641 Cnih3 protein_coding protein_coding MGP_CBAJ_T0019298.1 MGP_CBAJ_G0015719.1 mouse_genomes_project 1 44933780 44936064 + Gpr45 protein_coding processed_transcript MGP_CBAJ_T0019299.1 MGP_CBAJ_G0015719.1 mouse_genomes_project 1 44933871 45011608 + MGP_CBAJ_P0019299 Gpr45 protein_coding protein_coding MGP_CBAJ_T0019300.1 MGP_CBAJ_G0015719.1 mouse_genomes_project 1 44934047 45007135 + Gpr45 protein_coding processed_transcript MGP_CBAJ_T0019301.1 MGP_CBAJ_G0015719.1 mouse_genomes_project 1 44934090 44934787 + Gpr45 protein_coding processed_transcript MGP_CBAJ_T0019302.1 MGP_CBAJ_G0015719.1 mouse_genomes_project 1 45008211 45009757 + MGP_CBAJ_P0019302 Gpr45 protein_coding protein_coding MGP_CBAJ_T0098514.1 MGP_CBAJ_G0036769.1 mouse_genomes_project 1 11471295 11471407 - Gm23169 snRNA snRNA MGP_CBAJ_T0005663.1 MGP_CBAJ_G0004750.1 mouse_genomes_project 1 65870934 65896158 + 9530026F06Rik lincRNA lincRNA MGP_CBAJ_T0019637.1 MGP_CBAJ_G0015783.1 mouse_genomes_project 1 61297544 61311742 + MGP_CBAJ_P0019637 9430016H08Rik protein_coding protein_coding MGP_CBAJ_T0021036.1 MGP_CBAJ_G0016051.1 mouse_genomes_project 1 99602871 99604611 - Hes6 protein_coding retained_intron MGP_CBAJ_T0021037.1 MGP_CBAJ_G0016051.1 mouse_genomes_project 1 99602871 99604597 - Hes6 protein_coding retained_intron MGP_CBAJ_T0021038.1 MGP_CBAJ_G0016051.1 mouse_genomes_project 1 99602871 99604611 - MGP_CBAJ_P0021038 Hes6 protein_coding protein_coding MGP_CBAJ_T0021039.1 MGP_CBAJ_G0016051.1 mouse_genomes_project 1 99603675 99604597 - Hes6 protein_coding retained_intron MGP_CBAJ_T0021040.1 MGP_CBAJ_G0016051.1 mouse_genomes_project 1 99603736 99605427 - Hes6 protein_coding processed_transcript MGP_CBAJ_T0021737.1 MGP_CBAJ_G0016208.1 mouse_genomes_project 1 145495344 145577229 + MGP_CBAJ_P0021737 Lemd1 protein_coding protein_coding MGP_CBAJ_T0021738.1 MGP_CBAJ_G0016208.1 mouse_genomes_project 1 145495368 145575384 + MGP_CBAJ_P0021738 Lemd1 protein_coding protein_coding MGP_CBAJ_T0021739.1 MGP_CBAJ_G0016208.1 mouse_genomes_project 1 145495370 145513459 + Lemd1 protein_coding processed_transcript MGP_CBAJ_T0021740.1 MGP_CBAJ_G0016208.1 mouse_genomes_project 1 145504876 145509696 + Lemd1 protein_coding processed_transcript MGP_CBAJ_T0021741.1 MGP_CBAJ_G0016208.1 mouse_genomes_project 1 145507764 145508422 + Lemd1 protein_coding processed_transcript MGP_CBAJ_T0021742.1 MGP_CBAJ_G0016208.1 mouse_genomes_project 1 145539948 145575191 + MGP_CBAJ_P0021742 Lemd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021743.1 MGP_CBAJ_G0016208.1 mouse_genomes_project 1 145539977 145575011 + MGP_CBAJ_P0021743 Lemd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021744.1 MGP_CBAJ_G0016208.1 mouse_genomes_project 1 145541671 145543106 + Lemd1 protein_coding retained_intron MGP_CBAJ_T0021745.1 MGP_CBAJ_G0016208.1 mouse_genomes_project 1 145541671 145575036 + MGP_CBAJ_P0021745 Lemd1 protein_coding protein_coding MGP_CBAJ_T0009375.1 MGP_CBAJ_G0007513.1 mouse_genomes_project 1 67667755 67667860 + Gm44468 miRNA miRNA MGP_CBAJ_T0011894.1 MGP_CBAJ_G0010006.1 mouse_genomes_project 1 55040485 55041661 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023026.1 MGP_CBAJ_G0016467.1 mouse_genomes_project 1 188212644 188240100 + MGP_CBAJ_P0023026 Sh2d1b2 protein_coding protein_coding MGP_CBAJ_T0023027.1 MGP_CBAJ_G0016467.1 mouse_genomes_project 1 188212672 188236785 + MGP_CBAJ_P0023027 Sh2d1b2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0101511.1 MGP_CBAJ_G0039543.1 mouse_genomes_project 1 200781076 200790224 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0022011.1 MGP_CBAJ_G0016269.1 mouse_genomes_project 1 149581765 149584791 + MGP_CBAJ_P0022011 Phlda3 protein_coding protein_coding MGP_CBAJ_T0022012.1 MGP_CBAJ_G0016269.1 mouse_genomes_project 1 149582780 149584577 + Phlda3 protein_coding processed_transcript MGP_CBAJ_T0009437.1 MGP_CBAJ_G0007575.1 mouse_genomes_project 1 195837838 195837937 - Mir350 miRNA miRNA MGP_CBAJ_T0011850.1 MGP_CBAJ_G0009962.1 mouse_genomes_project 1 40727986 40728269 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000381.1 MGP_CBAJ_G0000324.1 mouse_genomes_project 1 25238134 25242129 - TEC TEC MGP_CBAJ_T0005869.1 MGP_CBAJ_G0004913.1 mouse_genomes_project 1 175859290 175902561 + 4930562F17Rik lincRNA lincRNA MGP_CBAJ_T0020778.1 MGP_CBAJ_G0015994.1 mouse_genomes_project 1 94140719 94145000 - MGP_CBAJ_P0020778 Nppc protein_coding protein_coding MGP_CBAJ_T0002741.1 MGP_CBAJ_G0002603.1 mouse_genomes_project 1 63204029 63251960 + Gm29018 antisense antisense MGP_CBAJ_T0002742.1 MGP_CBAJ_G0002603.1 mouse_genomes_project 1 63225904 63227756 + Gm29018 antisense antisense MGP_CBAJ_T0101455.1 MGP_CBAJ_G0039487.1 mouse_genomes_project 1 81603279 81603427 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0012160.1 MGP_CBAJ_G0010272.1 mouse_genomes_project 1 174175009 174175531 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009386.1 MGP_CBAJ_G0007524.1 mouse_genomes_project 1 81014770 81014834 - Mir375 miRNA miRNA MGP_CBAJ_T0020322.1 MGP_CBAJ_G0015913.1 mouse_genomes_project 1 81200888 81208969 - MGP_CBAJ_P0020322 Cnppd1 protein_coding protein_coding MGP_CBAJ_T0020323.1 MGP_CBAJ_G0015913.1 mouse_genomes_project 1 81202103 81208020 - MGP_CBAJ_P0020323 Cnppd1 protein_coding protein_coding MGP_CBAJ_T0020324.1 MGP_CBAJ_G0015913.1 mouse_genomes_project 1 81202106 81205205 - Cnppd1 protein_coding retained_intron MGP_CBAJ_T0020325.1 MGP_CBAJ_G0015913.1 mouse_genomes_project 1 81202106 81209028 - MGP_CBAJ_P0020325 Cnppd1 protein_coding protein_coding MGP_CBAJ_T0020326.1 MGP_CBAJ_G0015913.1 mouse_genomes_project 1 81203120 81204192 - Cnppd1 protein_coding retained_intron MGP_CBAJ_T0020327.1 MGP_CBAJ_G0015913.1 mouse_genomes_project 1 81203427 81204137 - Cnppd1 protein_coding retained_intron MGP_CBAJ_T0020328.1 MGP_CBAJ_G0015913.1 mouse_genomes_project 1 81205675 81208132 - MGP_CBAJ_P0020328 Cnppd1 protein_coding protein_coding MGP_CBAJ_T0020329.1 MGP_CBAJ_G0015913.1 mouse_genomes_project 1 81205925 81209042 - MGP_CBAJ_P0020329 Cnppd1 protein_coding protein_coding MGP_CBAJ_T0022749.1 MGP_CBAJ_G0016404.1 mouse_genomes_project 1 179865389 179938940 - MGP_CBAJ_P0022749 Prrc2c protein_coding protein_coding MGP_CBAJ_T0022750.1 MGP_CBAJ_G0016404.1 mouse_genomes_project 1 179865391 179938971 - MGP_CBAJ_P0022750 Prrc2c protein_coding protein_coding MGP_CBAJ_T0022751.1 MGP_CBAJ_G0016404.1 mouse_genomes_project 1 179866449 179900900 - MGP_CBAJ_P0022751 Prrc2c protein_coding protein_coding MGP_CBAJ_T0022752.1 MGP_CBAJ_G0016404.1 mouse_genomes_project 1 179866452 179901326 - MGP_CBAJ_P0022752 Prrc2c protein_coding protein_coding MGP_CBAJ_T0022753.1 MGP_CBAJ_G0016404.1 mouse_genomes_project 1 179867194 179938896 - MGP_CBAJ_P0022753 Prrc2c protein_coding protein_coding MGP_CBAJ_T0022754.1 MGP_CBAJ_G0016404.1 mouse_genomes_project 1 179867706 179938965 - MGP_CBAJ_P0022754 Prrc2c protein_coding protein_coding MGP_CBAJ_T0022755.1 MGP_CBAJ_G0016404.1 mouse_genomes_project 1 179877999 179884325 - Prrc2c protein_coding retained_intron MGP_CBAJ_T0022756.1 MGP_CBAJ_G0016404.1 mouse_genomes_project 1 179906501 179938819 - MGP_CBAJ_P0022756 Prrc2c protein_coding protein_coding MGP_CBAJ_T0022757.1 MGP_CBAJ_G0016404.1 mouse_genomes_project 1 179908936 179910151 - Prrc2c protein_coding retained_intron MGP_CBAJ_T0022758.1 MGP_CBAJ_G0016404.1 mouse_genomes_project 1 179916032 179938912 - Prrc2c protein_coding retained_intron MGP_CBAJ_T0022759.1 MGP_CBAJ_G0016404.1 mouse_genomes_project 1 179916685 179938765 - MGP_CBAJ_P0022759 Prrc2c protein_coding protein_coding MGP_CBAJ_T0022760.1 MGP_CBAJ_G0016404.1 mouse_genomes_project 1 179919045 179921009 - Prrc2c protein_coding retained_intron MGP_CBAJ_T0022761.1 MGP_CBAJ_G0016404.1 mouse_genomes_project 1 179927031 179929136 - Prrc2c protein_coding retained_intron MGP_CBAJ_T0022762.1 MGP_CBAJ_G0016404.1 mouse_genomes_project 1 179928671 179938902 - Prrc2c protein_coding processed_transcript MGP_CBAJ_T0005740.1 MGP_CBAJ_G0004807.1 mouse_genomes_project 1 96963462 96969560 + 1700067G17Rik lincRNA lincRNA MGP_CBAJ_T0020639.1 MGP_CBAJ_G0015964.1 mouse_genomes_project 1 90062739 90063731 + MGP_CBAJ_P0020639 Krtap28-13 protein_coding protein_coding MGP_CBAJ_T0022867.1 MGP_CBAJ_G0016433.1 mouse_genomes_project 1 182825937 182955259 - MGP_CBAJ_P0022867 Dcaf6 protein_coding protein_coding MGP_CBAJ_T0022868.1 MGP_CBAJ_G0016433.1 mouse_genomes_project 1 182826609 182852632 - Dcaf6 protein_coding retained_intron MGP_CBAJ_T0022869.1 MGP_CBAJ_G0016433.1 mouse_genomes_project 1 182851691 182898883 - MGP_CBAJ_P0022869 Dcaf6 protein_coding protein_coding MGP_CBAJ_T0022870.1 MGP_CBAJ_G0016433.1 mouse_genomes_project 1 182852121 182898898 - MGP_CBAJ_P0022870 Dcaf6 protein_coding protein_coding MGP_CBAJ_T0022871.1 MGP_CBAJ_G0016433.1 mouse_genomes_project 1 182870271 182955269 - Dcaf6 protein_coding processed_transcript MGP_CBAJ_T0022610.1 MGP_CBAJ_G0016379.1 mouse_genomes_project 1 176325183 176771710 + MGP_CBAJ_P0022610 Tnr protein_coding protein_coding MGP_CBAJ_T0022611.1 MGP_CBAJ_G0016379.1 mouse_genomes_project 1 176325255 176555720 + Tnr protein_coding retained_intron MGP_CBAJ_T0022612.1 MGP_CBAJ_G0016379.1 mouse_genomes_project 1 176555434 176764494 + MGP_CBAJ_P0022612 Tnr protein_coding protein_coding MGP_CBAJ_T0022613.1 MGP_CBAJ_G0016379.1 mouse_genomes_project 1 176598292 176686222 + MGP_CBAJ_P0022613 Tnr protein_coding protein_coding MGP_CBAJ_T0022614.1 MGP_CBAJ_G0016379.1 mouse_genomes_project 1 176686276 176699503 + MGP_CBAJ_P0022614 Tnr protein_coding protein_coding MGP_CBAJ_T0018783.1 MGP_CBAJ_G0015616.1 mouse_genomes_project 1 19731946 19749444 - MGP_CBAJ_P0018783 Mcm3 protein_coding protein_coding MGP_CBAJ_T0018784.1 MGP_CBAJ_G0015616.1 mouse_genomes_project 1 19731951 19749392 - Mcm3 protein_coding retained_intron MGP_CBAJ_T0018785.1 MGP_CBAJ_G0015616.1 mouse_genomes_project 1 19731984 19732699 - Mcm3 protein_coding retained_intron MGP_CBAJ_T0018786.1 MGP_CBAJ_G0015616.1 mouse_genomes_project 1 19732143 19733895 - Mcm3 protein_coding retained_intron MGP_CBAJ_T0018787.1 MGP_CBAJ_G0015616.1 mouse_genomes_project 1 19733658 19734902 - Mcm3 protein_coding retained_intron MGP_CBAJ_T0021365.1 MGP_CBAJ_G0016128.1 mouse_genomes_project 1 128170783 128190871 + MGP_CBAJ_P0021365 Gm19965 protein_coding protein_coding MGP_CBAJ_T0022001.1 MGP_CBAJ_G0016267.1 mouse_genomes_project 1 149222170 149384597 - MGP_CBAJ_P0022001 Nav1 protein_coding protein_coding MGP_CBAJ_T0022002.1 MGP_CBAJ_G0016267.1 mouse_genomes_project 1 149222170 149384247 - MGP_CBAJ_P0022002 Nav1 protein_coding protein_coding MGP_CBAJ_T0022003.1 MGP_CBAJ_G0016267.1 mouse_genomes_project 1 149226373 149406118 - MGP_CBAJ_P0022003 Nav1 protein_coding protein_coding MGP_CBAJ_T0022004.1 MGP_CBAJ_G0016267.1 mouse_genomes_project 1 149248090 149249623 - Nav1 protein_coding retained_intron MGP_CBAJ_T0022005.1 MGP_CBAJ_G0016267.1 mouse_genomes_project 1 149251035 149263790 - MGP_CBAJ_P0022005 Nav1 protein_coding protein_coding MGP_CBAJ_T0022006.1 MGP_CBAJ_G0016267.1 mouse_genomes_project 1 149253492 149256955 - Nav1 protein_coding retained_intron MGP_CBAJ_T0022007.1 MGP_CBAJ_G0016267.1 mouse_genomes_project 1 149253492 149306280 - Nav1 protein_coding retained_intron MGP_CBAJ_T0022008.1 MGP_CBAJ_G0016267.1 mouse_genomes_project 1 149254374 149306347 - Nav1 protein_coding processed_transcript MGP_CBAJ_T0023973.1 MGP_CBAJ_G0016690.1 mouse_genomes_project 1 213916832 213928102 - MGP_CBAJ_P0023973 Sertad4 protein_coding protein_coding MGP_CBAJ_T0023974.1 MGP_CBAJ_G0016690.1 mouse_genomes_project 1 213916833 213924092 - MGP_CBAJ_P0023974 Sertad4 protein_coding protein_coding MGP_CBAJ_T0023975.1 MGP_CBAJ_G0016690.1 mouse_genomes_project 1 213919408 213924092 - MGP_CBAJ_P0023975 Sertad4 protein_coding protein_coding MGP_CBAJ_T0023976.1 MGP_CBAJ_G0016690.1 mouse_genomes_project 1 213926554 213927832 - Sertad4 protein_coding processed_transcript MGP_CBAJ_T0101456.1 MGP_CBAJ_G0039488.1 mouse_genomes_project 1 84900152 84900413 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0021407.1 MGP_CBAJ_G0016134.1 mouse_genomes_project 1 130326606 130343722 + Tfcp2l1 protein_coding processed_transcript MGP_CBAJ_T0021408.1 MGP_CBAJ_G0016134.1 mouse_genomes_project 1 130326607 130400115 + MGP_CBAJ_P0021408 Tfcp2l1 protein_coding protein_coding MGP_CBAJ_T0098525.1 MGP_CBAJ_G0036780.1 mouse_genomes_project 1 36728776 36728881 + Gm25634 snRNA snRNA MGP_CBAJ_T0012022.1 MGP_CBAJ_G0010134.1 mouse_genomes_project 1 109700627 109700979 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011803.1 MGP_CBAJ_G0009915.1 mouse_genomes_project 1 25178597 25179167 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005602.1 MGP_CBAJ_G0004711.1 mouse_genomes_project 1 40483334 40492307 - Gm37821 lincRNA lincRNA MGP_CBAJ_T0101486.1 MGP_CBAJ_G0039518.1 mouse_genomes_project 1 148174440 148178587 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0005573.1 MGP_CBAJ_G0004685.1 mouse_genomes_project 1 19770307 19777090 + lincRNA lincRNA MGP_CBAJ_T0005883.1 MGP_CBAJ_G0004924.1 mouse_genomes_project 1 182050624 182059006 + lincRNA lincRNA MGP_CBAJ_T0019744.1 MGP_CBAJ_G0015801.1 mouse_genomes_project 1 63072557 63152714 - MGP_CBAJ_P0019744 Trak2 protein_coding protein_coding MGP_CBAJ_T0019745.1 MGP_CBAJ_G0015801.1 mouse_genomes_project 1 63075612 63125625 - MGP_CBAJ_P0019745 Trak2 protein_coding protein_coding MGP_CBAJ_T0019746.1 MGP_CBAJ_G0015801.1 mouse_genomes_project 1 63075780 63085629 - Trak2 protein_coding retained_intron MGP_CBAJ_T0019747.1 MGP_CBAJ_G0015801.1 mouse_genomes_project 1 63100295 63102097 - Trak2 protein_coding processed_transcript MGP_CBAJ_T0019748.1 MGP_CBAJ_G0015801.1 mouse_genomes_project 1 63106288 63152713 - MGP_CBAJ_P0019748 Trak2 protein_coding protein_coding MGP_CBAJ_T0019749.1 MGP_CBAJ_G0015801.1 mouse_genomes_project 1 63125189 63152714 - Trak2 protein_coding retained_intron MGP_CBAJ_T0021967.1 MGP_CBAJ_G0016261.1 mouse_genomes_project 1 149009015 149014010 - MGP_CBAJ_P0021967 Elf3 protein_coding protein_coding MGP_CBAJ_T0021968.1 MGP_CBAJ_G0016261.1 mouse_genomes_project 1 149009019 149013880 - MGP_CBAJ_P0021968 Elf3 protein_coding protein_coding MGP_CBAJ_T0021969.1 MGP_CBAJ_G0016261.1 mouse_genomes_project 1 149012109 149013102 - Elf3 protein_coding retained_intron MGP_CBAJ_T0005930.1 MGP_CBAJ_G0004961.1 mouse_genomes_project 1 203026708 203026862 + Gm38079 lincRNA lincRNA MGP_CBAJ_T0005793.1 MGP_CBAJ_G0004852.1 mouse_genomes_project 1 132374330 132376981 + 1700012E03Rik lincRNA lincRNA MGP_CBAJ_T0012219.1 MGP_CBAJ_G0010331.1 mouse_genomes_project 1 207518956 207519281 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005673.1 MGP_CBAJ_G0004757.1 mouse_genomes_project 1 67957935 67964202 - Gm11608 lincRNA lincRNA MGP_CBAJ_T0005674.1 MGP_CBAJ_G0004757.1 mouse_genomes_project 1 67957935 67964207 - Gm11608 lincRNA lincRNA MGP_CBAJ_T0012169.1 MGP_CBAJ_G0010281.1 mouse_genomes_project 1 178841323 178842913 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005743.1 MGP_CBAJ_G0004810.1 mouse_genomes_project 1 98221886 98227682 + 4930434B07Rik lincRNA lincRNA MGP_CBAJ_T0005899.1 MGP_CBAJ_G0004937.1 mouse_genomes_project 1 184966026 184966724 + Gm2453 lincRNA lincRNA MGP_CBAJ_T0005900.1 MGP_CBAJ_G0004937.1 mouse_genomes_project 1 184966441 184970799 + Gm2453 lincRNA lincRNA MGP_CBAJ_T0000532.1 MGP_CBAJ_G0000474.1 mouse_genomes_project 1 100162803 100166099 + TEC TEC MGP_CBAJ_T0005878.1 MGP_CBAJ_G0004919.1 mouse_genomes_project 1 180572806 180574629 - Gm26523 lincRNA lincRNA MGP_CBAJ_T0000594.1 MGP_CBAJ_G0000536.1 mouse_genomes_project 1 145182459 145184370 + TEC TEC MGP_CBAJ_T0000498.1 MGP_CBAJ_G0000440.1 mouse_genomes_project 1 87442819 87444686 - TEC TEC MGP_CBAJ_T0011871.1 MGP_CBAJ_G0009983.1 mouse_genomes_project 1 48114758 48124578 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0019051.1 MGP_CBAJ_G0015671.1 mouse_genomes_project 1 37630226 37639931 - MGP_CBAJ_P0019051 Sema4c protein_coding protein_coding MGP_CBAJ_T0019052.1 MGP_CBAJ_G0015671.1 mouse_genomes_project 1 37630229 37639931 - MGP_CBAJ_P0019052 Sema4c protein_coding protein_coding MGP_CBAJ_T0019053.1 MGP_CBAJ_G0015671.1 mouse_genomes_project 1 37630229 37639107 - MGP_CBAJ_P0019053 Sema4c protein_coding protein_coding MGP_CBAJ_T0019054.1 MGP_CBAJ_G0015671.1 mouse_genomes_project 1 37630229 37639138 - MGP_CBAJ_P0019054 Sema4c protein_coding protein_coding MGP_CBAJ_T0019055.1 MGP_CBAJ_G0015671.1 mouse_genomes_project 1 37633310 37634479 - Sema4c protein_coding retained_intron MGP_CBAJ_T0019056.1 MGP_CBAJ_G0015671.1 mouse_genomes_project 1 37634808 37635811 - Sema4c protein_coding retained_intron MGP_CBAJ_T0019057.1 MGP_CBAJ_G0015671.1 mouse_genomes_project 1 37635980 37639115 - MGP_CBAJ_P0019057 Sema4c protein_coding protein_coding MGP_CBAJ_T0019058.1 MGP_CBAJ_G0015671.1 mouse_genomes_project 1 37637512 37639832 - MGP_CBAJ_P0019058 Sema4c protein_coding protein_coding MGP_CBAJ_T0012134.1 MGP_CBAJ_G0010246.1 mouse_genomes_project 1 164119473 164120263 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000608.1 MGP_CBAJ_G0000549.1 mouse_genomes_project 1 149722975 149725671 - TEC TEC MGP_CBAJ_T0000393.1 MGP_CBAJ_G0000336.1 mouse_genomes_project 1 31209827 31212851 - TEC TEC MGP_CBAJ_T0021190.1 MGP_CBAJ_G0016085.1 mouse_genomes_project 1 102077644 102095805 - MGP_CBAJ_P0021190 Stk25 protein_coding protein_coding MGP_CBAJ_T0021191.1 MGP_CBAJ_G0016085.1 mouse_genomes_project 1 102079795 102095712 - Stk25 protein_coding retained_intron MGP_CBAJ_T0021192.1 MGP_CBAJ_G0016085.1 mouse_genomes_project 1 102080253 102083256 - Stk25 protein_coding retained_intron MGP_CBAJ_T0021193.1 MGP_CBAJ_G0016085.1 mouse_genomes_project 1 102081290 102083683 - Stk25 protein_coding retained_intron MGP_CBAJ_T0021194.1 MGP_CBAJ_G0016085.1 mouse_genomes_project 1 102083744 102095562 - MGP_CBAJ_P0021194 Stk25 protein_coding protein_coding MGP_CBAJ_T0021195.1 MGP_CBAJ_G0016085.1 mouse_genomes_project 1 102085025 102124730 - MGP_CBAJ_P0021195 Stk25 protein_coding protein_coding MGP_CBAJ_T0005956.1 MGP_CBAJ_G0004979.1 mouse_genomes_project 1 207170716 207174236 + A430105J06Rik lincRNA lincRNA MGP_CBAJ_T0005678.1 MGP_CBAJ_G0004761.1 mouse_genomes_project 1 69492423 69500655 + Gm28982 lincRNA lincRNA MGP_CBAJ_T0020243.1 MGP_CBAJ_G0015896.1 mouse_genomes_project 1 80606288 80630921 + MGP_CBAJ_P0020243 Plcd4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020244.1 MGP_CBAJ_G0015896.1 mouse_genomes_project 1 80606288 80630921 + MGP_CBAJ_P0020244 Plcd4 protein_coding protein_coding MGP_CBAJ_T0020245.1 MGP_CBAJ_G0015896.1 mouse_genomes_project 1 80606288 80630921 + MGP_CBAJ_P0020245 Plcd4 protein_coding protein_coding MGP_CBAJ_T0020246.1 MGP_CBAJ_G0015896.1 mouse_genomes_project 1 80606303 80623738 + Plcd4 protein_coding retained_intron MGP_CBAJ_T0020247.1 MGP_CBAJ_G0015896.1 mouse_genomes_project 1 80606303 80629104 + MGP_CBAJ_P0020247 Plcd4 protein_coding protein_coding MGP_CBAJ_T0020248.1 MGP_CBAJ_G0015896.1 mouse_genomes_project 1 80606303 80629104 + MGP_CBAJ_P0020248 Plcd4 protein_coding protein_coding MGP_CBAJ_T0020249.1 MGP_CBAJ_G0015896.1 mouse_genomes_project 1 80607760 80609672 + Plcd4 protein_coding retained_intron MGP_CBAJ_T0020250.1 MGP_CBAJ_G0015896.1 mouse_genomes_project 1 80607764 80629104 + MGP_CBAJ_P0020250 Plcd4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020251.1 MGP_CBAJ_G0015896.1 mouse_genomes_project 1 80607764 80629104 + MGP_CBAJ_P0020251 Plcd4 protein_coding protein_coding MGP_CBAJ_T0020252.1 MGP_CBAJ_G0015896.1 mouse_genomes_project 1 80623558 80628428 + Plcd4 protein_coding processed_transcript MGP_CBAJ_T0020253.1 MGP_CBAJ_G0015896.1 mouse_genomes_project 1 80627562 80628753 + Plcd4 protein_coding retained_intron MGP_CBAJ_T0005757.1 MGP_CBAJ_G0004824.1 mouse_genomes_project 1 101120202 101121462 - Gm29482 lincRNA lincRNA MGP_CBAJ_T0005842.1 MGP_CBAJ_G0004892.1 mouse_genomes_project 1 153600646 153626211 + 4933436E23Rik lincRNA lincRNA MGP_CBAJ_T0023308.1 MGP_CBAJ_G0016529.1 mouse_genomes_project 1 190867208 190870639 + Cfap45 protein_coding retained_intron MGP_CBAJ_T0023309.1 MGP_CBAJ_G0016529.1 mouse_genomes_project 1 190867451 190892041 + MGP_CBAJ_P0023309 Cfap45 protein_coding protein_coding MGP_CBAJ_T0023310.1 MGP_CBAJ_G0016529.1 mouse_genomes_project 1 190867543 190879026 + Cfap45 protein_coding retained_intron MGP_CBAJ_T0023311.1 MGP_CBAJ_G0016529.1 mouse_genomes_project 1 190867546 190878920 + MGP_CBAJ_P0023311 Cfap45 protein_coding protein_coding MGP_CBAJ_T0023312.1 MGP_CBAJ_G0016529.1 mouse_genomes_project 1 190867588 190878897 + MGP_CBAJ_P0023312 Cfap45 protein_coding protein_coding MGP_CBAJ_T0023313.1 MGP_CBAJ_G0016529.1 mouse_genomes_project 1 190872455 190878980 + MGP_CBAJ_P0023313 Cfap45 protein_coding protein_coding MGP_CBAJ_T0023314.1 MGP_CBAJ_G0016529.1 mouse_genomes_project 1 190872816 190878980 + MGP_CBAJ_P0023314 Cfap45 protein_coding protein_coding MGP_CBAJ_T0023315.1 MGP_CBAJ_G0016529.1 mouse_genomes_project 1 190883904 190886859 + MGP_CBAJ_P0023315 Cfap45 protein_coding protein_coding MGP_CBAJ_T0023477.1 MGP_CBAJ_G0016589.1 mouse_genomes_project 1 197702063 197716717 - MGP_CBAJ_P0023477 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023478.1 MGP_CBAJ_G0016589.1 mouse_genomes_project 1 197702123 197709610 - MGP_CBAJ_P0023478 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023479.1 MGP_CBAJ_G0016589.1 mouse_genomes_project 1 197702609 197708396 - MGP_CBAJ_P0023479 protein_coding nonsense_mediated_decay MGP_CBAJ_T0011996.1 MGP_CBAJ_G0010108.1 mouse_genomes_project 1 94255003 94255425 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0022335.1 MGP_CBAJ_G0016332.1 mouse_genomes_project 1 168760173 168804791 + MGP_CBAJ_P0022335 Ncf2 protein_coding protein_coding MGP_CBAJ_T0022336.1 MGP_CBAJ_G0016332.1 mouse_genomes_project 1 168767802 168789147 + MGP_CBAJ_P0022336 Ncf2 protein_coding protein_coding MGP_CBAJ_T0022337.1 MGP_CBAJ_G0016332.1 mouse_genomes_project 1 168767855 168804790 + MGP_CBAJ_P0022337 Ncf2 protein_coding protein_coding MGP_CBAJ_T0022338.1 MGP_CBAJ_G0016332.1 mouse_genomes_project 1 168767943 168772632 + Ncf2 protein_coding retained_intron MGP_CBAJ_T0022339.1 MGP_CBAJ_G0016332.1 mouse_genomes_project 1 168767997 168803914 + MGP_CBAJ_P0022339 Ncf2 protein_coding unknown_likely_coding MGP_CBAJ_T0022340.1 MGP_CBAJ_G0016332.1 mouse_genomes_project 1 168770883 168789146 + Ncf2 protein_coding retained_intron MGP_CBAJ_T0022341.1 MGP_CBAJ_G0016332.1 mouse_genomes_project 1 168788423 168789339 + Ncf2 protein_coding retained_intron MGP_CBAJ_T0018924.1 MGP_CBAJ_G0015648.1 mouse_genomes_project 1 34624831 34680491 - MGP_CBAJ_P0018924 Bend6 protein_coding protein_coding MGP_CBAJ_T0018925.1 MGP_CBAJ_G0015648.1 mouse_genomes_project 1 34624831 34680452 - MGP_CBAJ_P0018925 Bend6 protein_coding protein_coding MGP_CBAJ_T0018926.1 MGP_CBAJ_G0015648.1 mouse_genomes_project 1 34635503 34656324 - Bend6 protein_coding processed_transcript MGP_CBAJ_T0018927.1 MGP_CBAJ_G0015648.1 mouse_genomes_project 1 34635964 34656686 - Bend6 protein_coding retained_intron MGP_CBAJ_T0018928.1 MGP_CBAJ_G0015648.1 mouse_genomes_project 1 34646600 34656334 - Bend6 protein_coding processed_transcript MGP_CBAJ_T0011807.1 MGP_CBAJ_G0009919.1 mouse_genomes_project 1 27766626 27767280 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099739.1 MGP_CBAJ_G0037994.1 mouse_genomes_project 1 17722716 17722788 - Gm24075 snoRNA snoRNA MGP_CBAJ_T0022331.1 MGP_CBAJ_G0016330.1 mouse_genomes_project 1 168704196 168711479 + MGP_CBAJ_P0022331 Apobec4 protein_coding protein_coding MGP_CBAJ_T0000492.1 MGP_CBAJ_G0000434.1 mouse_genomes_project 1 86370220 86372011 + TEC TEC MGP_CBAJ_T0000548.1 MGP_CBAJ_G0000490.1 mouse_genomes_project 1 116196229 116199540 - TEC TEC MGP_CBAJ_T0002743.1 MGP_CBAJ_G0002604.1 mouse_genomes_project 1 63317109 63319418 + G730003C15Rik antisense antisense MGP_CBAJ_T0002744.1 MGP_CBAJ_G0002604.1 mouse_genomes_project 1 63317109 63319416 + G730003C15Rik antisense antisense MGP_CBAJ_T0000662.1 MGP_CBAJ_G0000602.1 mouse_genomes_project 1 173306483 173309125 - TEC TEC MGP_CBAJ_T0009358.1 MGP_CBAJ_G0007496.1 mouse_genomes_project 1 30250904 30251014 + Gm23771 miRNA miRNA MGP_CBAJ_T0021706.1 MGP_CBAJ_G0016203.1 mouse_genomes_project 1 145175725 145200613 + MGP_CBAJ_P0021706 Nucks1 protein_coding protein_coding MGP_CBAJ_T0021707.1 MGP_CBAJ_G0016203.1 mouse_genomes_project 1 145175747 145204660 + MGP_CBAJ_P0021707 Nucks1 protein_coding protein_coding MGP_CBAJ_T0021708.1 MGP_CBAJ_G0016203.1 mouse_genomes_project 1 145197096 145198005 + Nucks1 protein_coding retained_intron MGP_CBAJ_T0000484.1 MGP_CBAJ_G0000426.1 mouse_genomes_project 1 80327287 80330148 + TEC TEC MGP_CBAJ_T0020061.1 MGP_CBAJ_G0015858.1 mouse_genomes_project 1 71937310 71973516 - MGP_CBAJ_P0020061 Acadl protein_coding protein_coding MGP_CBAJ_T0020062.1 MGP_CBAJ_G0015858.1 mouse_genomes_project 1 71953389 71968596 - Acadl protein_coding processed_transcript MGP_CBAJ_T0012025.1 MGP_CBAJ_G0010137.1 mouse_genomes_project 1 110098968 110099635 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011956.1 MGP_CBAJ_G0010068.1 mouse_genomes_project 1 72086266 72087906 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000360.1 MGP_CBAJ_G0000305.1 mouse_genomes_project 1 14636258 14638579 - TEC TEC MGP_CBAJ_T0023316.1 MGP_CBAJ_G0016530.1 mouse_genomes_project 1 190904573 190914484 + MGP_CBAJ_P0023316 Vsig8 protein_coding protein_coding MGP_CBAJ_T0023317.1 MGP_CBAJ_G0016530.1 mouse_genomes_project 1 190908689 190914483 + MGP_CBAJ_P0023317 Vsig8 protein_coding protein_coding MGP_CBAJ_T0022453.1 MGP_CBAJ_G0016355.1 mouse_genomes_project 1 171849307 171863476 + MGP_CBAJ_P0022453 Acbd6 protein_coding protein_coding MGP_CBAJ_T0022454.1 MGP_CBAJ_G0016355.1 mouse_genomes_project 1 171849309 171988411 + MGP_CBAJ_P0022454 Acbd6 protein_coding protein_coding MGP_CBAJ_T0022455.1 MGP_CBAJ_G0016355.1 mouse_genomes_project 1 171849313 171878978 + MGP_CBAJ_P0022455 Acbd6 protein_coding protein_coding MGP_CBAJ_T0022456.1 MGP_CBAJ_G0016355.1 mouse_genomes_project 1 171854304 171984198 + Acbd6 protein_coding processed_transcript MGP_CBAJ_T0022457.1 MGP_CBAJ_G0016355.1 mouse_genomes_project 1 171858435 171863447 + Acbd6 protein_coding retained_intron MGP_CBAJ_T0022458.1 MGP_CBAJ_G0016355.1 mouse_genomes_project 1 171984093 171985452 + MGP_CBAJ_P0022458 Acbd6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012172.1 MGP_CBAJ_G0010284.1 mouse_genomes_project 1 179813052 179813763 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099731.1 MGP_CBAJ_G0037986.1 mouse_genomes_project 1 7702449 7702536 - Snord87 snoRNA snoRNA MGP_CBAJ_T0000568.1 MGP_CBAJ_G0000510.1 mouse_genomes_project 1 135843943 135846856 - TEC TEC MGP_CBAJ_T0022895.1 MGP_CBAJ_G0016437.1 mouse_genomes_project 1 183148315 183238376 - MGP_CBAJ_P0022895 Rcsd1 protein_coding protein_coding MGP_CBAJ_T0022896.1 MGP_CBAJ_G0016437.1 mouse_genomes_project 1 183150746 183238338 - MGP_CBAJ_P0022896 Rcsd1 protein_coding protein_coding MGP_CBAJ_T0022897.1 MGP_CBAJ_G0016437.1 mouse_genomes_project 1 183171606 183239683 - MGP_CBAJ_P0022897 Rcsd1 protein_coding protein_coding MGP_CBAJ_T0022898.1 MGP_CBAJ_G0016437.1 mouse_genomes_project 1 183234811 183240016 - Rcsd1 protein_coding retained_intron MGP_CBAJ_T0022899.1 MGP_CBAJ_G0016437.1 mouse_genomes_project 1 183238728 183240047 - Rcsd1 protein_coding processed_transcript MGP_CBAJ_T0099748.1 MGP_CBAJ_G0038003.1 mouse_genomes_project 1 41003872 41004088 + Gm24826 snoRNA snoRNA MGP_CBAJ_T0020133.1 MGP_CBAJ_G0015871.1 mouse_genomes_project 1 78031500 78063641 - MGP_CBAJ_P0020133 Pecr protein_coding nonsense_mediated_decay MGP_CBAJ_T0020134.1 MGP_CBAJ_G0015871.1 mouse_genomes_project 1 78031505 78063695 - MGP_CBAJ_P0020134 Pecr protein_coding nonsense_mediated_decay MGP_CBAJ_T0020135.1 MGP_CBAJ_G0015871.1 mouse_genomes_project 1 78031505 78063696 - MGP_CBAJ_P0020135 Pecr protein_coding protein_coding MGP_CBAJ_T0020136.1 MGP_CBAJ_G0015871.1 mouse_genomes_project 1 78039329 78063641 - MGP_CBAJ_P0020136 Pecr protein_coding protein_coding MGP_CBAJ_T0005684.1 MGP_CBAJ_G0004767.1 mouse_genomes_project 1 74949166 74952596 - Gm29113 lincRNA lincRNA MGP_CBAJ_T0098539.1 MGP_CBAJ_G0036794.1 mouse_genomes_project 1 75487978 75488104 - Gm23879 snRNA snRNA MGP_CBAJ_T0021921.1 MGP_CBAJ_G0016250.1 mouse_genomes_project 1 148106013 148116835 + Klhl12 protein_coding retained_intron MGP_CBAJ_T0021922.1 MGP_CBAJ_G0016250.1 mouse_genomes_project 1 148106013 148141197 + MGP_CBAJ_P0021922 Klhl12 protein_coding protein_coding MGP_CBAJ_T0021923.1 MGP_CBAJ_G0016250.1 mouse_genomes_project 1 148106013 148141342 + MGP_CBAJ_P0021923 Klhl12 protein_coding protein_coding MGP_CBAJ_T0021924.1 MGP_CBAJ_G0016250.1 mouse_genomes_project 1 148106037 148141197 + MGP_CBAJ_P0021924 Klhl12 protein_coding protein_coding MGP_CBAJ_T0021925.1 MGP_CBAJ_G0016250.1 mouse_genomes_project 1 148119139 148124163 + Klhl12 protein_coding retained_intron MGP_CBAJ_T0021926.1 MGP_CBAJ_G0016250.1 mouse_genomes_project 1 148125572 148136287 + Klhl12 protein_coding retained_intron MGP_CBAJ_T0099741.1 MGP_CBAJ_G0037996.1 mouse_genomes_project 1 19779935 19780067 - Gm24723 snoRNA snoRNA MGP_CBAJ_T0023330.1 MGP_CBAJ_G0016538.1 mouse_genomes_project 1 191632925 191635958 - MGP_CBAJ_P0023330 Olfr1406 protein_coding protein_coding MGP_CBAJ_T0023331.1 MGP_CBAJ_G0016538.1 mouse_genomes_project 1 191635622 191644539 - MGP_CBAJ_P0023331 Olfr1406 protein_coding protein_coding MGP_CBAJ_T0005882.1 MGP_CBAJ_G0004923.1 mouse_genomes_project 1 181901059 181912641 + Gm26685 lincRNA lincRNA MGP_CBAJ_T0005638.1 MGP_CBAJ_G0004731.1 mouse_genomes_project 1 54236661 54239163 + Gm29325 lincRNA lincRNA MGP_CBAJ_T0000586.1 MGP_CBAJ_G0000528.1 mouse_genomes_project 1 142822446 142826284 + TEC TEC MGP_CBAJ_T0000693.1 MGP_CBAJ_G0000633.1 mouse_genomes_project 1 181980981 181984154 + TEC TEC MGP_CBAJ_T0023933.1 MGP_CBAJ_G0016683.1 mouse_genomes_project 1 212841397 212855772 + MGP_CBAJ_P0023933 Nek2 protein_coding protein_coding MGP_CBAJ_T0023934.1 MGP_CBAJ_G0016683.1 mouse_genomes_project 1 212841463 212848283 + Nek2 protein_coding retained_intron MGP_CBAJ_T0023935.1 MGP_CBAJ_G0016683.1 mouse_genomes_project 1 212842135 212845814 + Nek2 protein_coding retained_intron MGP_CBAJ_T0023936.1 MGP_CBAJ_G0016683.1 mouse_genomes_project 1 212847136 212849979 + Nek2 protein_coding processed_transcript MGP_CBAJ_T0018747.1 MGP_CBAJ_G0015603.1 mouse_genomes_project 1 15178429 15182298 + Ly96 protein_coding retained_intron MGP_CBAJ_T0018748.1 MGP_CBAJ_G0015603.1 mouse_genomes_project 1 15178813 15199689 + MGP_CBAJ_P0018748 Ly96 protein_coding protein_coding MGP_CBAJ_T0018749.1 MGP_CBAJ_G0015603.1 mouse_genomes_project 1 15178888 15199615 + MGP_CBAJ_P0018749 Ly96 protein_coding protein_coding MGP_CBAJ_T0012043.1 MGP_CBAJ_G0010155.1 mouse_genomes_project 1 118290161 118290760 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005610.1 MGP_CBAJ_G0004716.1 mouse_genomes_project 1 44118821 44120204 + Gm9915 lincRNA lincRNA MGP_CBAJ_T0005611.1 MGP_CBAJ_G0004716.1 mouse_genomes_project 1 44118822 44120204 + Gm9915 lincRNA lincRNA MGP_CBAJ_T0019448.1 MGP_CBAJ_G0015748.1 mouse_genomes_project 1 55235991 55271276 + MGP_CBAJ_P0019448 Stat1 protein_coding protein_coding MGP_CBAJ_T0019449.1 MGP_CBAJ_G0015748.1 mouse_genomes_project 1 55236006 55277729 + MGP_CBAJ_P0019449 Stat1 protein_coding protein_coding MGP_CBAJ_T0019450.1 MGP_CBAJ_G0015748.1 mouse_genomes_project 1 55236041 55271276 + MGP_CBAJ_P0019450 Stat1 protein_coding protein_coding MGP_CBAJ_T0019451.1 MGP_CBAJ_G0015748.1 mouse_genomes_project 1 55236043 55276871 + MGP_CBAJ_P0019451 Stat1 protein_coding protein_coding MGP_CBAJ_T0019452.1 MGP_CBAJ_G0015748.1 mouse_genomes_project 1 55236049 55248497 + MGP_CBAJ_P0019452 Stat1 protein_coding protein_coding MGP_CBAJ_T0019453.1 MGP_CBAJ_G0015748.1 mouse_genomes_project 1 55236100 55271195 + MGP_CBAJ_P0019453 Stat1 protein_coding protein_coding MGP_CBAJ_T0019454.1 MGP_CBAJ_G0015748.1 mouse_genomes_project 1 55236110 55236946 + Stat1 protein_coding retained_intron MGP_CBAJ_T0019455.1 MGP_CBAJ_G0015748.1 mouse_genomes_project 1 55236123 55253716 + Stat1 protein_coding retained_intron MGP_CBAJ_T0019456.1 MGP_CBAJ_G0015748.1 mouse_genomes_project 1 55236175 55276594 + MGP_CBAJ_P0019456 Stat1 protein_coding protein_coding MGP_CBAJ_T0019457.1 MGP_CBAJ_G0015748.1 mouse_genomes_project 1 55265967 55268263 + Stat1 protein_coding retained_intron MGP_CBAJ_T0019458.1 MGP_CBAJ_G0015748.1 mouse_genomes_project 1 55266121 55277727 + MGP_CBAJ_P0019458 Stat1 protein_coding protein_coding MGP_CBAJ_T0019459.1 MGP_CBAJ_G0015748.1 mouse_genomes_project 1 55268116 55275424 + MGP_CBAJ_P0019459 Stat1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023289.1 MGP_CBAJ_G0016526.1 mouse_genomes_project 1 190816485 190819701 + MGP_CBAJ_P0023289 Slamf9 protein_coding protein_coding MGP_CBAJ_T0023886.1 MGP_CBAJ_G0016672.1 mouse_genomes_project 1 211940377 211959250 - MGP_CBAJ_P0023886 Tatdn3 protein_coding protein_coding MGP_CBAJ_T0023887.1 MGP_CBAJ_G0016672.1 mouse_genomes_project 1 211940389 211959222 - MGP_CBAJ_P0023887 Tatdn3 protein_coding protein_coding MGP_CBAJ_T0023888.1 MGP_CBAJ_G0016672.1 mouse_genomes_project 1 211940393 211959222 - MGP_CBAJ_P0023888 Tatdn3 protein_coding protein_coding MGP_CBAJ_T0023889.1 MGP_CBAJ_G0016672.1 mouse_genomes_project 1 211940393 211959223 - MGP_CBAJ_P0023889 Tatdn3 protein_coding protein_coding MGP_CBAJ_T0023890.1 MGP_CBAJ_G0016672.1 mouse_genomes_project 1 211940396 211944447 - Tatdn3 protein_coding retained_intron MGP_CBAJ_T0023891.1 MGP_CBAJ_G0016672.1 mouse_genomes_project 1 211951276 211955166 - Tatdn3 protein_coding retained_intron MGP_CBAJ_T0023892.1 MGP_CBAJ_G0016672.1 mouse_genomes_project 1 211954218 211955761 - Tatdn3 protein_coding retained_intron MGP_CBAJ_T0023893.1 MGP_CBAJ_G0016672.1 mouse_genomes_project 1 211955100 211959222 - Tatdn3 protein_coding retained_intron MGP_CBAJ_T0023894.1 MGP_CBAJ_G0016672.1 mouse_genomes_project 1 211956378 211959222 - Tatdn3 protein_coding retained_intron MGP_CBAJ_T0011976.1 MGP_CBAJ_G0010088.1 mouse_genomes_project 1 86089075 86090430 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098538.1 MGP_CBAJ_G0036793.1 mouse_genomes_project 1 73693714 73693808 - Gm25542 snRNA snRNA MGP_CBAJ_T0099760.1 MGP_CBAJ_G0038015.1 mouse_genomes_project 1 63957347 63957434 + Snord70 snoRNA snoRNA MGP_CBAJ_T0101005.1 MGP_CBAJ_G0039250.1 mouse_genomes_project 1 190798094 190816101 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101006.1 MGP_CBAJ_G0039250.1 mouse_genomes_project 1 190815165 190816019 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0021152.1 MGP_CBAJ_G0016079.1 mouse_genomes_project 1 101729929 101740967 - Pask protein_coding retained_intron MGP_CBAJ_T0021153.1 MGP_CBAJ_G0016079.1 mouse_genomes_project 1 101729937 101771681 - MGP_CBAJ_P0021153 Pask protein_coding protein_coding MGP_CBAJ_T0021154.1 MGP_CBAJ_G0016079.1 mouse_genomes_project 1 101730997 101734309 - Pask protein_coding retained_intron MGP_CBAJ_T0021155.1 MGP_CBAJ_G0016079.1 mouse_genomes_project 1 101731244 101732504 - Pask protein_coding retained_intron MGP_CBAJ_T0021156.1 MGP_CBAJ_G0016079.1 mouse_genomes_project 1 101741381 101772357 - Pask protein_coding retained_intron MGP_CBAJ_T0021157.1 MGP_CBAJ_G0016079.1 mouse_genomes_project 1 101762835 101772374 - MGP_CBAJ_P0021157 Pask protein_coding protein_coding MGP_CBAJ_T0012093.1 MGP_CBAJ_G0010205.1 mouse_genomes_project 1 138135960 138136589 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012056.1 MGP_CBAJ_G0010168.1 mouse_genomes_project 1 122983233 122984283 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005585.1 MGP_CBAJ_G0004696.1 mouse_genomes_project 1 31431165 31432806 + Gm28644 lincRNA lincRNA MGP_CBAJ_T0009379.1 MGP_CBAJ_G0007517.1 mouse_genomes_project 1 68859361 68859425 - Mir6899 miRNA miRNA MGP_CBAJ_T0021681.1 MGP_CBAJ_G0016195.1 mouse_genomes_project 1 144772471 144784441 + MGP_CBAJ_P0021681 Fam72a protein_coding protein_coding MGP_CBAJ_T0012002.1 MGP_CBAJ_G0010114.1 mouse_genomes_project 1 96996246 96996489 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000386.1 MGP_CBAJ_G0000329.1 mouse_genomes_project 1 25381541 25386745 - TEC TEC MGP_CBAJ_T0018732.1 MGP_CBAJ_G0015601.1 mouse_genomes_project 1 15118929 15138820 - MGP_CBAJ_P0018732 Tceb1 protein_coding protein_coding MGP_CBAJ_T0018733.1 MGP_CBAJ_G0015601.1 mouse_genomes_project 1 15119970 15138978 - MGP_CBAJ_P0018733 Tceb1 protein_coding protein_coding MGP_CBAJ_T0018734.1 MGP_CBAJ_G0015601.1 mouse_genomes_project 1 15120345 15138954 - MGP_CBAJ_P0018734 Tceb1 protein_coding protein_coding MGP_CBAJ_T0018735.1 MGP_CBAJ_G0015601.1 mouse_genomes_project 1 15120372 15138974 - MGP_CBAJ_P0018735 Tceb1 protein_coding protein_coding MGP_CBAJ_T0018736.1 MGP_CBAJ_G0015601.1 mouse_genomes_project 1 15120394 15138850 - MGP_CBAJ_P0018736 Tceb1 protein_coding protein_coding MGP_CBAJ_T0018737.1 MGP_CBAJ_G0015601.1 mouse_genomes_project 1 15120546 15129961 - MGP_CBAJ_P0018737 Tceb1 protein_coding protein_coding MGP_CBAJ_T0018738.1 MGP_CBAJ_G0015601.1 mouse_genomes_project 1 15120676 15138561 - MGP_CBAJ_P0018738 Tceb1 protein_coding protein_coding MGP_CBAJ_T0018739.1 MGP_CBAJ_G0015601.1 mouse_genomes_project 1 15128753 15138836 - Tceb1 protein_coding retained_intron MGP_CBAJ_T0018740.1 MGP_CBAJ_G0015601.1 mouse_genomes_project 1 15128872 15138851 - Tceb1 protein_coding retained_intron MGP_CBAJ_T0018741.1 MGP_CBAJ_G0015601.1 mouse_genomes_project 1 15129602 15138814 - Tceb1 protein_coding retained_intron MGP_CBAJ_T0018742.1 MGP_CBAJ_G0015601.1 mouse_genomes_project 1 15129657 15138978 - Tceb1 protein_coding retained_intron MGP_CBAJ_T0023030.1 MGP_CBAJ_G0016470.1 mouse_genomes_project 1 188313033 188316356 + MGP_CBAJ_P0023030 1700015E13Rik protein_coding protein_coding MGP_CBAJ_T0005808.1 MGP_CBAJ_G0004863.1 mouse_genomes_project 1 137657130 137663728 - 1700121L03Rik lincRNA lincRNA MGP_CBAJ_T0019996.1 MGP_CBAJ_G0015848.1 mouse_genomes_project 1 70022986 70040486 - MGP_CBAJ_P0019996 Gm28845 protein_coding protein_coding MGP_CBAJ_T0099764.1 MGP_CBAJ_G0038019.1 mouse_genomes_project 1 67674719 67674833 + Gm24942 snoRNA snoRNA MGP_CBAJ_T0020666.1 MGP_CBAJ_G0015970.1 mouse_genomes_project 1 91892237 92019067 - MGP_CBAJ_P0020666 Trip12 protein_coding protein_coding MGP_CBAJ_T0020667.1 MGP_CBAJ_G0015970.1 mouse_genomes_project 1 91892237 92017855 - MGP_CBAJ_P0020667 Trip12 protein_coding protein_coding MGP_CBAJ_T0020668.1 MGP_CBAJ_G0015970.1 mouse_genomes_project 1 91895313 91989663 - MGP_CBAJ_P0020668 Trip12 protein_coding protein_coding MGP_CBAJ_T0020669.1 MGP_CBAJ_G0015970.1 mouse_genomes_project 1 91895313 91922520 - MGP_CBAJ_P0020669 Trip12 protein_coding protein_coding MGP_CBAJ_T0020670.1 MGP_CBAJ_G0015970.1 mouse_genomes_project 1 91895626 91904916 - MGP_CBAJ_P0020670 Trip12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020671.1 MGP_CBAJ_G0015970.1 mouse_genomes_project 1 91897259 91902089 - Trip12 protein_coding retained_intron MGP_CBAJ_T0020672.1 MGP_CBAJ_G0015970.1 mouse_genomes_project 1 91901819 91904987 - Trip12 protein_coding retained_intron MGP_CBAJ_T0020673.1 MGP_CBAJ_G0015970.1 mouse_genomes_project 1 91917990 91927636 - MGP_CBAJ_P0020673 Trip12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020674.1 MGP_CBAJ_G0015970.1 mouse_genomes_project 1 91922400 91923786 - Trip12 protein_coding retained_intron MGP_CBAJ_T0020675.1 MGP_CBAJ_G0015970.1 mouse_genomes_project 1 91922461 92017862 - MGP_CBAJ_P0020675 Trip12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020676.1 MGP_CBAJ_G0015970.1 mouse_genomes_project 1 91927634 92017855 - MGP_CBAJ_P0020676 Trip12 protein_coding protein_coding MGP_CBAJ_T0020677.1 MGP_CBAJ_G0015970.1 mouse_genomes_project 1 91929881 91933417 - Trip12 protein_coding retained_intron MGP_CBAJ_T0020678.1 MGP_CBAJ_G0015970.1 mouse_genomes_project 1 91941215 91941980 - Trip12 protein_coding retained_intron MGP_CBAJ_T0020679.1 MGP_CBAJ_G0015970.1 mouse_genomes_project 1 91941251 91968604 - MGP_CBAJ_P0020679 Trip12 protein_coding protein_coding MGP_CBAJ_T0020680.1 MGP_CBAJ_G0015970.1 mouse_genomes_project 1 91957581 91959392 - Trip12 protein_coding retained_intron MGP_CBAJ_T0020681.1 MGP_CBAJ_G0015970.1 mouse_genomes_project 1 91957995 92017852 - MGP_CBAJ_P0020681 Trip12 protein_coding protein_coding MGP_CBAJ_T0020682.1 MGP_CBAJ_G0015970.1 mouse_genomes_project 1 91969039 92018817 - MGP_CBAJ_P0020682 Trip12 protein_coding protein_coding MGP_CBAJ_T0000606.1 MGP_CBAJ_G0000547.1 mouse_genomes_project 1 149276514 149277528 - TEC TEC MGP_CBAJ_T0022629.1 MGP_CBAJ_G0016384.1 mouse_genomes_project 1 177094439 177241515 - MGP_CBAJ_P0022629 Rabgap1l protein_coding protein_coding MGP_CBAJ_T0022630.1 MGP_CBAJ_G0016384.1 mouse_genomes_project 1 177101313 177107121 - Rabgap1l protein_coding retained_intron MGP_CBAJ_T0022631.1 MGP_CBAJ_G0016384.1 mouse_genomes_project 1 177101829 177128302 - MGP_CBAJ_P0022631 Rabgap1l protein_coding protein_coding MGP_CBAJ_T0022632.1 MGP_CBAJ_G0016384.1 mouse_genomes_project 1 177101881 177187131 - MGP_CBAJ_P0022632 Rabgap1l protein_coding protein_coding MGP_CBAJ_T0022633.1 MGP_CBAJ_G0016384.1 mouse_genomes_project 1 177101931 177165279 - Rabgap1l protein_coding processed_transcript MGP_CBAJ_T0022634.1 MGP_CBAJ_G0016384.1 mouse_genomes_project 1 177113626 177124842 - Rabgap1l protein_coding retained_intron MGP_CBAJ_T0022635.1 MGP_CBAJ_G0016384.1 mouse_genomes_project 1 177124825 177127615 - Rabgap1l protein_coding processed_transcript MGP_CBAJ_T0022636.1 MGP_CBAJ_G0016384.1 mouse_genomes_project 1 177133429 177188963 - MGP_CBAJ_P0022636 Rabgap1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0022637.1 MGP_CBAJ_G0016384.1 mouse_genomes_project 1 177133790 177331185 - MGP_CBAJ_P0022637 Rabgap1l protein_coding protein_coding MGP_CBAJ_T0022638.1 MGP_CBAJ_G0016384.1 mouse_genomes_project 1 177134062 177733274 - MGP_CBAJ_P0022638 Rabgap1l protein_coding protein_coding MGP_CBAJ_T0022639.1 MGP_CBAJ_G0016384.1 mouse_genomes_project 1 177161823 177165466 - Rabgap1l protein_coding processed_transcript MGP_CBAJ_T0022640.1 MGP_CBAJ_G0016384.1 mouse_genomes_project 1 177166545 177173155 - Rabgap1l protein_coding processed_transcript MGP_CBAJ_T0022641.1 MGP_CBAJ_G0016384.1 mouse_genomes_project 1 177168264 177187569 - Rabgap1l protein_coding processed_transcript MGP_CBAJ_T0022642.1 MGP_CBAJ_G0016384.1 mouse_genomes_project 1 177330917 177350536 - Rabgap1l protein_coding retained_intron MGP_CBAJ_T0022643.1 MGP_CBAJ_G0016384.1 mouse_genomes_project 1 177593026 177733266 - MGP_CBAJ_P0022643 Rabgap1l protein_coding protein_coding MGP_CBAJ_T0022644.1 MGP_CBAJ_G0016384.1 mouse_genomes_project 1 177668447 177733538 - MGP_CBAJ_P0022644 Rabgap1l protein_coding protein_coding MGP_CBAJ_T0022982.1 MGP_CBAJ_G0016457.1 mouse_genomes_project 1 185449658 185622485 + MGP_CBAJ_P0022982 Lmx1a protein_coding protein_coding MGP_CBAJ_T0022983.1 MGP_CBAJ_G0016457.1 mouse_genomes_project 1 185449978 185622485 + MGP_CBAJ_P0022983 Lmx1a protein_coding protein_coding MGP_CBAJ_T0000557.1 MGP_CBAJ_G0000499.1 mouse_genomes_project 1 132848424 132851547 + TEC TEC MGP_CBAJ_T0002689.1 MGP_CBAJ_G0002562.1 mouse_genomes_project 1 14656581 14672028 + Gm28095 antisense antisense MGP_CBAJ_T0012122.1 MGP_CBAJ_G0010234.1 mouse_genomes_project 1 157411959 157412254 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000707.1 MGP_CBAJ_G0000647.1 mouse_genomes_project 1 190859643 190861210 + TEC TEC MGP_CBAJ_T0098235.1 MGP_CBAJ_G0036507.1 mouse_genomes_project 1 89674706 89675705 + Gm28941 sense_intronic sense_intronic MGP_CBAJ_T0000514.1 MGP_CBAJ_G0000456.1 mouse_genomes_project 1 94109305 94111559 + TEC TEC MGP_CBAJ_T0022787.1 MGP_CBAJ_G0016410.1 mouse_genomes_project 1 180261209 180338579 - MGP_CBAJ_P0022787 Mroh9 protein_coding protein_coding MGP_CBAJ_T0021302.1 MGP_CBAJ_G0016108.1 mouse_genomes_project 1 115844559 115927507 + MGP_CBAJ_P0021302 Tnfrsf11a protein_coding protein_coding MGP_CBAJ_T0021303.1 MGP_CBAJ_G0016108.1 mouse_genomes_project 1 115844591 115884929 + Tnfrsf11a protein_coding retained_intron MGP_CBAJ_T0021304.1 MGP_CBAJ_G0016108.1 mouse_genomes_project 1 115890358 115898100 + Tnfrsf11a protein_coding retained_intron MGP_CBAJ_T0000336.1 MGP_CBAJ_G0000281.1 mouse_genomes_project 1 6283370 6284541 - TEC TEC MGP_CBAJ_T0005631.1 MGP_CBAJ_G0004725.1 mouse_genomes_project 1 49391312 49392260 - Gm28151 lincRNA lincRNA MGP_CBAJ_T0101482.1 MGP_CBAJ_G0039514.1 mouse_genomes_project 1 129226657 129260504 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0019710.1 MGP_CBAJ_G0015795.1 mouse_genomes_project 1 62458565 62507583 - MGP_CBAJ_P0019710 Orc2 protein_coding protein_coding MGP_CBAJ_T0019711.1 MGP_CBAJ_G0015795.1 mouse_genomes_project 1 62459998 62503858 - MGP_CBAJ_P0019711 Orc2 protein_coding protein_coding MGP_CBAJ_T0019712.1 MGP_CBAJ_G0015795.1 mouse_genomes_project 1 62482968 62484106 - Orc2 protein_coding retained_intron MGP_CBAJ_T0019713.1 MGP_CBAJ_G0015795.1 mouse_genomes_project 1 62486306 62507399 - MGP_CBAJ_P0019713 Orc2 protein_coding protein_coding MGP_CBAJ_T0019714.1 MGP_CBAJ_G0015795.1 mouse_genomes_project 1 62502765 62507429 - MGP_CBAJ_P0019714 Orc2 protein_coding protein_coding MGP_CBAJ_T0011837.1 MGP_CBAJ_G0009949.1 mouse_genomes_project 1 35500573 35500808 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098582.1 MGP_CBAJ_G0036837.1 mouse_genomes_project 1 188810793 188810900 - Gm23523 snRNA snRNA MGP_CBAJ_T0098578.1 MGP_CBAJ_G0036833.1 mouse_genomes_project 1 167722440 167722573 - Gm25279 snRNA snRNA MGP_CBAJ_T0101458.1 MGP_CBAJ_G0039490.1 mouse_genomes_project 1 95710558 95711307 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016828.1 MGP_CBAJ_G0014863.1 mouse_genomes_project 1 188945279 188960786 + Gm9929 processed_transcript processed_transcript MGP_CBAJ_T0019257.1 MGP_CBAJ_G0015708.1 mouse_genomes_project 1 41817741 41919244 + MGP_CBAJ_P0019257 Il1r1 protein_coding protein_coding MGP_CBAJ_T0019258.1 MGP_CBAJ_G0015708.1 mouse_genomes_project 1 41864416 41918188 + MGP_CBAJ_P0019258 Il1r1 protein_coding protein_coding MGP_CBAJ_T0019259.1 MGP_CBAJ_G0015708.1 mouse_genomes_project 1 41864487 41875011 + Il1r1 protein_coding processed_transcript MGP_CBAJ_T0002755.1 MGP_CBAJ_G0002613.1 mouse_genomes_project 1 71368710 71379286 - Gm10558 antisense antisense MGP_CBAJ_T0002752.1 MGP_CBAJ_G0002610.1 mouse_genomes_project 1 67059076 67109037 - Pard3bos3 antisense antisense MGP_CBAJ_T0023837.1 MGP_CBAJ_G0016663.1 mouse_genomes_project 1 210392097 210441426 - MGP_CBAJ_P0023837 Cenpf protein_coding protein_coding MGP_CBAJ_T0023838.1 MGP_CBAJ_G0016663.1 mouse_genomes_project 1 210394187 210400348 - MGP_CBAJ_P0023838 Cenpf protein_coding protein_coding MGP_CBAJ_T0023839.1 MGP_CBAJ_G0016663.1 mouse_genomes_project 1 210410387 210441426 - MGP_CBAJ_P0023839 Cenpf protein_coding protein_coding MGP_CBAJ_T0023840.1 MGP_CBAJ_G0016663.1 mouse_genomes_project 1 210421080 210424473 - Cenpf protein_coding retained_intron MGP_CBAJ_T0023841.1 MGP_CBAJ_G0016663.1 mouse_genomes_project 1 210437150 210441375 - MGP_CBAJ_P0023841 Cenpf protein_coding nonsense_mediated_decay MGP_CBAJ_T0023842.1 MGP_CBAJ_G0016663.1 mouse_genomes_project 1 210440401 210441426 - Cenpf protein_coding retained_intron MGP_CBAJ_T0005857.1 MGP_CBAJ_G0004905.1 mouse_genomes_project 1 170204157 170292818 - A830008E24Rik lincRNA lincRNA MGP_CBAJ_T0005858.1 MGP_CBAJ_G0004905.1 mouse_genomes_project 1 170216663 170294616 - A830008E24Rik lincRNA lincRNA MGP_CBAJ_T0098540.1 MGP_CBAJ_G0036795.1 mouse_genomes_project 1 76181630 76181737 + Gm23422 snRNA snRNA MGP_CBAJ_T0023485.1 MGP_CBAJ_G0016591.1 mouse_genomes_project 1 197809363 197855289 + Efcab2 protein_coding processed_transcript MGP_CBAJ_T0023486.1 MGP_CBAJ_G0016591.1 mouse_genomes_project 1 197809381 197914253 + MGP_CBAJ_P0023486 Efcab2 protein_coding protein_coding MGP_CBAJ_T0023487.1 MGP_CBAJ_G0016591.1 mouse_genomes_project 1 197869988 197911212 + Efcab2 protein_coding processed_transcript MGP_CBAJ_T0005668.1 MGP_CBAJ_G0004755.1 mouse_genomes_project 1 67768178 67772824 + Ino80dos lincRNA lincRNA MGP_CBAJ_T0005669.1 MGP_CBAJ_G0004755.1 mouse_genomes_project 1 67772056 67773195 + Ino80dos lincRNA lincRNA MGP_CBAJ_T0005670.1 MGP_CBAJ_G0004755.1 mouse_genomes_project 1 67772334 67827593 + Ino80dos lincRNA lincRNA MGP_CBAJ_T0005671.1 MGP_CBAJ_G0004755.1 mouse_genomes_project 1 67772603 67826087 + Ino80dos lincRNA lincRNA MGP_CBAJ_T0022501.1 MGP_CBAJ_G0016363.1 mouse_genomes_project 1 172644644 172661708 + MGP_CBAJ_P0022501 Nphs2 protein_coding protein_coding MGP_CBAJ_T0022502.1 MGP_CBAJ_G0016363.1 mouse_genomes_project 1 172644960 172660104 + MGP_CBAJ_P0022502 Nphs2 protein_coding protein_coding MGP_CBAJ_T0019401.1 MGP_CBAJ_G0015738.1 mouse_genomes_project 1 48180129 48180878 - Gm5269 protein_coding translated_processed_pseudogene MGP_CBAJ_T0019402.1 MGP_CBAJ_G0015738.1 mouse_genomes_project 1 48180545 48180683 - MGP_CBAJ_P0019402 Gm5269 protein_coding protein_coding MGP_CBAJ_T0005662.1 MGP_CBAJ_G0004749.1 mouse_genomes_project 1 65799296 65805150 + Gm11587 lincRNA lincRNA MGP_CBAJ_T0022955.1 MGP_CBAJ_G0016448.1 mouse_genomes_project 1 184237431 184258815 - MGP_CBAJ_P0022955 Gm4847 protein_coding protein_coding MGP_CBAJ_T0099745.1 MGP_CBAJ_G0038000.1 mouse_genomes_project 1 26241062 26241168 + Gm24064 snoRNA snoRNA MGP_CBAJ_T0023708.1 MGP_CBAJ_G0016636.1 mouse_genomes_project 1 203321170 203346847 - MGP_CBAJ_P0023708 Brox protein_coding protein_coding MGP_CBAJ_T0023709.1 MGP_CBAJ_G0016636.1 mouse_genomes_project 1 203321334 203351328 - MGP_CBAJ_P0023709 Brox protein_coding nonsense_mediated_decay MGP_CBAJ_T0023710.1 MGP_CBAJ_G0016636.1 mouse_genomes_project 1 203333646 203336060 - Brox protein_coding retained_intron MGP_CBAJ_T0023711.1 MGP_CBAJ_G0016636.1 mouse_genomes_project 1 203336003 203342583 - Brox protein_coding retained_intron MGP_CBAJ_T0023712.1 MGP_CBAJ_G0016636.1 mouse_genomes_project 1 203336058 203351289 - MGP_CBAJ_P0023712 Brox protein_coding nonsense_mediated_decay MGP_CBAJ_T0023713.1 MGP_CBAJ_G0016636.1 mouse_genomes_project 1 203337618 203342150 - Brox protein_coding retained_intron MGP_CBAJ_T0023714.1 MGP_CBAJ_G0016636.1 mouse_genomes_project 1 203340720 203351317 - Brox protein_coding processed_transcript MGP_CBAJ_T0023715.1 MGP_CBAJ_G0016636.1 mouse_genomes_project 1 203341814 203345730 - MGP_CBAJ_P0023715 Brox protein_coding protein_coding MGP_CBAJ_T0005833.1 MGP_CBAJ_G0004885.1 mouse_genomes_project 1 150610318 150647522 + Platr22 lincRNA lincRNA MGP_CBAJ_T0011861.1 MGP_CBAJ_G0009973.1 mouse_genomes_project 1 46439059 46440048 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097865.1 MGP_CBAJ_G0036138.1 mouse_genomes_project 1 31526902 31527040 - Gm27362 rRNA rRNA MGP_CBAJ_T0020830.1 MGP_CBAJ_G0016006.1 mouse_genomes_project 1 94974033 94982400 - MGP_CBAJ_P0020830 Kcnj13 protein_coding protein_coding MGP_CBAJ_T0020831.1 MGP_CBAJ_G0016006.1 mouse_genomes_project 1 94974672 94977060 - MGP_CBAJ_P0020831 Kcnj13 protein_coding protein_coding MGP_CBAJ_T0011910.1 MGP_CBAJ_G0010022.1 mouse_genomes_project 1 59035118 59036011 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000741.1 MGP_CBAJ_G0000679.1 mouse_genomes_project 1 202471377 202475551 + TEC TEC MGP_CBAJ_T0022088.1 MGP_CBAJ_G0016284.1 mouse_genomes_project 1 150348069 150377123 + Kif14 protein_coding retained_intron MGP_CBAJ_T0022089.1 MGP_CBAJ_G0016284.1 mouse_genomes_project 1 150349661 150417694 + MGP_CBAJ_P0022089 Kif14 protein_coding protein_coding MGP_CBAJ_T0022090.1 MGP_CBAJ_G0016284.1 mouse_genomes_project 1 150349661 150413823 + MGP_CBAJ_P0022090 Kif14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022091.1 MGP_CBAJ_G0016284.1 mouse_genomes_project 1 150349684 150417694 + MGP_CBAJ_P0022091 Kif14 protein_coding protein_coding MGP_CBAJ_T0022092.1 MGP_CBAJ_G0016284.1 mouse_genomes_project 1 150350729 150353448 + Kif14 protein_coding retained_intron MGP_CBAJ_T0022093.1 MGP_CBAJ_G0016284.1 mouse_genomes_project 1 150357875 150361434 + Kif14 protein_coding processed_transcript MGP_CBAJ_T0022094.1 MGP_CBAJ_G0016284.1 mouse_genomes_project 1 150357875 150361434 + Kif14 protein_coding processed_transcript MGP_CBAJ_T0022095.1 MGP_CBAJ_G0016284.1 mouse_genomes_project 1 150357875 150361434 + MGP_CBAJ_P0022095 Kif14 protein_coding protein_coding MGP_CBAJ_T0020077.1 MGP_CBAJ_G0015861.1 mouse_genomes_project 1 72283329 72401626 + MGP_CBAJ_P0020077 Cps1 protein_coding protein_coding MGP_CBAJ_T0019190.1 MGP_CBAJ_G0015693.1 mouse_genomes_project 1 39495673 39980684 - MGP_CBAJ_P0019190 Aff3 protein_coding protein_coding MGP_CBAJ_T0019191.1 MGP_CBAJ_G0015693.1 mouse_genomes_project 1 39495674 40017966 - MGP_CBAJ_P0019191 Aff3 protein_coding protein_coding MGP_CBAJ_T0019192.1 MGP_CBAJ_G0015693.1 mouse_genomes_project 1 39497796 39980640 - MGP_CBAJ_P0019192 Aff3 protein_coding unknown_likely_coding MGP_CBAJ_T0019193.1 MGP_CBAJ_G0015693.1 mouse_genomes_project 1 39499609 39518243 - Aff3 protein_coding processed_transcript MGP_CBAJ_T0019194.1 MGP_CBAJ_G0015693.1 mouse_genomes_project 1 39666675 40017966 - Aff3 protein_coding processed_transcript MGP_CBAJ_T0019195.1 MGP_CBAJ_G0015693.1 mouse_genomes_project 1 39878870 40017966 - MGP_CBAJ_P0019195 Aff3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0002718.1 MGP_CBAJ_G0002584.1 mouse_genomes_project 1 39634982 39638997 + Gm16151 antisense antisense MGP_CBAJ_T0023599.1 MGP_CBAJ_G0016611.1 mouse_genomes_project 1 200535367 200554698 + MGP_CBAJ_P0023599 Sde2 protein_coding protein_coding MGP_CBAJ_T0023600.1 MGP_CBAJ_G0016611.1 mouse_genomes_project 1 200548652 200552824 + Sde2 protein_coding retained_intron MGP_CBAJ_T0009434.1 MGP_CBAJ_G0007572.1 mouse_genomes_project 1 189221014 189221076 - Gm27844 miRNA miRNA MGP_CBAJ_T0012083.1 MGP_CBAJ_G0010195.1 mouse_genomes_project 1 134065451 134066760 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012127.1 MGP_CBAJ_G0010239.1 mouse_genomes_project 1 159857583 159858727 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0023148.1 MGP_CBAJ_G0016493.1 mouse_genomes_project 1 189474570 189484391 - MGP_CBAJ_P0023148 Ufc1 protein_coding protein_coding MGP_CBAJ_T0023149.1 MGP_CBAJ_G0016493.1 mouse_genomes_project 1 189474572 189476426 - Ufc1 protein_coding retained_intron MGP_CBAJ_T0023150.1 MGP_CBAJ_G0016493.1 mouse_genomes_project 1 189474701 189484308 - MGP_CBAJ_P0023150 Ufc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023151.1 MGP_CBAJ_G0016493.1 mouse_genomes_project 1 189474719 189484354 - MGP_CBAJ_P0023151 Ufc1 protein_coding protein_coding MGP_CBAJ_T0023152.1 MGP_CBAJ_G0016493.1 mouse_genomes_project 1 189474784 189484307 - Ufc1 protein_coding retained_intron MGP_CBAJ_T0019209.1 MGP_CBAJ_G0015697.1 mouse_genomes_project 1 40416241 40425445 + MGP_CBAJ_P0019209 Pdcl3 protein_coding protein_coding MGP_CBAJ_T0019210.1 MGP_CBAJ_G0015697.1 mouse_genomes_project 1 40416273 40423719 + MGP_CBAJ_P0019210 Pdcl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019211.1 MGP_CBAJ_G0015697.1 mouse_genomes_project 1 40423961 40425448 + Pdcl3 protein_coding retained_intron MGP_CBAJ_T0098557.1 MGP_CBAJ_G0036812.1 mouse_genomes_project 1 130145153 130145278 - Gm22710 snRNA snRNA MGP_CBAJ_T0021377.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130072609 130302290 + MGP_CBAJ_P0021377 Clasp1 protein_coding protein_coding MGP_CBAJ_T0021378.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130072609 130302290 + MGP_CBAJ_P0021378 Clasp1 protein_coding protein_coding MGP_CBAJ_T0021379.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130072609 130302290 + MGP_CBAJ_P0021379 Clasp1 protein_coding protein_coding MGP_CBAJ_T0021380.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130072609 130302358 + MGP_CBAJ_P0021380 Clasp1 protein_coding protein_coding MGP_CBAJ_T0021381.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130072895 130191991 + Clasp1 protein_coding retained_intron MGP_CBAJ_T0021382.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130073005 130300051 + MGP_CBAJ_P0021382 Clasp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021383.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130073014 130302352 + MGP_CBAJ_P0021383 Clasp1 protein_coding protein_coding MGP_CBAJ_T0021384.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130073014 130300468 + MGP_CBAJ_P0021384 Clasp1 protein_coding protein_coding MGP_CBAJ_T0021385.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130073014 130300468 + MGP_CBAJ_P0021385 Clasp1 protein_coding protein_coding MGP_CBAJ_T0021386.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130073015 130300625 + MGP_CBAJ_P0021386 Clasp1 protein_coding protein_coding MGP_CBAJ_T0021387.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130073016 130196299 + Clasp1 protein_coding retained_intron MGP_CBAJ_T0021388.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130073032 130300051 + MGP_CBAJ_P0021388 Clasp1 protein_coding protein_coding MGP_CBAJ_T0021389.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130073076 130302098 + MGP_CBAJ_P0021389 Clasp1 protein_coding protein_coding MGP_CBAJ_T0021390.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130103171 130302361 + MGP_CBAJ_P0021390 Clasp1 protein_coding protein_coding MGP_CBAJ_T0021391.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130103335 130313771 + MGP_CBAJ_P0021391 Clasp1 protein_coding protein_coding MGP_CBAJ_T0021392.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130103335 130299998 + MGP_CBAJ_P0021392 Clasp1 protein_coding protein_coding MGP_CBAJ_T0021393.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130145600 130186544 + Clasp1 protein_coding retained_intron MGP_CBAJ_T0021394.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130158508 130299985 + Clasp1 protein_coding processed_transcript MGP_CBAJ_T0021395.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130158563 130192674 + Clasp1 protein_coding processed_transcript MGP_CBAJ_T0021396.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130159324 130190168 + Clasp1 protein_coding processed_transcript MGP_CBAJ_T0021397.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130160509 130193679 + MGP_CBAJ_P0021397 Clasp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021398.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130170770 130300023 + MGP_CBAJ_P0021398 Clasp1 protein_coding protein_coding MGP_CBAJ_T0021399.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130198961 130214610 + Clasp1 protein_coding retained_intron MGP_CBAJ_T0021400.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130201441 130236654 + MGP_CBAJ_P0021400 Clasp1 protein_coding protein_coding MGP_CBAJ_T0021401.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130220831 130302318 + MGP_CBAJ_P0021401 Clasp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021402.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130223518 130226243 + Clasp1 protein_coding retained_intron MGP_CBAJ_T0021403.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130235953 130236673 + Clasp1 protein_coding retained_intron MGP_CBAJ_T0021404.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130236719 130273607 + MGP_CBAJ_P0021404 Clasp1 protein_coding protein_coding MGP_CBAJ_T0021405.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130242966 130245058 + Clasp1 protein_coding retained_intron MGP_CBAJ_T0021406.1 MGP_CBAJ_G0016133.1 mouse_genomes_project 1 130297511 130302290 + Clasp1 protein_coding retained_intron MGP_CBAJ_T0005606.1 MGP_CBAJ_G0004713.1 mouse_genomes_project 1 42898799 42912442 - 4930448I06Rik lincRNA lincRNA MGP_CBAJ_T0021448.1 MGP_CBAJ_G0016143.1 mouse_genomes_project 1 131872838 131942122 + MGP_CBAJ_P0021448 Sctr protein_coding protein_coding MGP_CBAJ_T0021449.1 MGP_CBAJ_G0016143.1 mouse_genomes_project 1 131872978 131942120 + MGP_CBAJ_P0021449 Sctr protein_coding protein_coding MGP_CBAJ_T0009416.1 MGP_CBAJ_G0007554.1 mouse_genomes_project 1 148489004 148489088 + Gm22232 miRNA miRNA MGP_CBAJ_T0005560.1 MGP_CBAJ_G0004676.1 mouse_genomes_project 1 7701940 7704100 - Snhg6 lincRNA lincRNA MGP_CBAJ_T0005561.1 MGP_CBAJ_G0004676.1 mouse_genomes_project 1 7702004 7703211 - Snhg6 lincRNA lincRNA MGP_CBAJ_T0005562.1 MGP_CBAJ_G0004676.1 mouse_genomes_project 1 7702006 7702885 - Snhg6 lincRNA lincRNA MGP_CBAJ_T0005563.1 MGP_CBAJ_G0004676.1 mouse_genomes_project 1 7702006 7704099 - Snhg6 lincRNA lincRNA MGP_CBAJ_T0005564.1 MGP_CBAJ_G0004676.1 mouse_genomes_project 1 7702006 7704085 - Snhg6 lincRNA lincRNA MGP_CBAJ_T0005587.1 MGP_CBAJ_G0004698.1 mouse_genomes_project 1 35146164 35147039 - Gm37958 lincRNA lincRNA MGP_CBAJ_T0012080.1 MGP_CBAJ_G0010192.1 mouse_genomes_project 1 133537785 133538004 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023729.1 MGP_CBAJ_G0016639.1 mouse_genomes_project 1 203453083 203480435 + MGP_CBAJ_P0023729 Taf1a protein_coding protein_coding MGP_CBAJ_T0023730.1 MGP_CBAJ_G0016639.1 mouse_genomes_project 1 203453087 203478087 + MGP_CBAJ_P0023730 Taf1a protein_coding protein_coding MGP_CBAJ_T0023731.1 MGP_CBAJ_G0016639.1 mouse_genomes_project 1 203453167 203480435 + MGP_CBAJ_P0023731 Taf1a protein_coding unknown_likely_coding MGP_CBAJ_T0023732.1 MGP_CBAJ_G0016639.1 mouse_genomes_project 1 203479690 203481280 + MGP_CBAJ_P0023732 Taf1a protein_coding protein_coding MGP_CBAJ_T0099775.1 MGP_CBAJ_G0038030.1 mouse_genomes_project 1 93769390 93769470 - Gm24148 snoRNA snoRNA MGP_CBAJ_T0002897.1 MGP_CBAJ_G0002722.1 mouse_genomes_project 1 200400410 200416641 - Gm37768 antisense antisense MGP_CBAJ_T0019781.1 MGP_CBAJ_G0015807.1 mouse_genomes_project 1 63475862 63578404 + MGP_CBAJ_P0019781 Cdk15 protein_coding protein_coding MGP_CBAJ_T0019782.1 MGP_CBAJ_G0015807.1 mouse_genomes_project 1 63475863 63577954 + MGP_CBAJ_P0019782 Cdk15 protein_coding protein_coding MGP_CBAJ_T0019783.1 MGP_CBAJ_G0015807.1 mouse_genomes_project 1 63476084 63476835 + Cdk15 protein_coding processed_transcript MGP_CBAJ_T0019784.1 MGP_CBAJ_G0015807.1 mouse_genomes_project 1 63522509 63578033 + Cdk15 protein_coding processed_transcript MGP_CBAJ_T0023645.1 MGP_CBAJ_G0016624.1 mouse_genomes_project 1 201675175 201721599 - MGP_CBAJ_P0023645 Lbr protein_coding protein_coding MGP_CBAJ_T0023646.1 MGP_CBAJ_G0016624.1 mouse_genomes_project 1 201675196 201680363 - Lbr protein_coding retained_intron MGP_CBAJ_T0023647.1 MGP_CBAJ_G0016624.1 mouse_genomes_project 1 201679715 201699312 - MGP_CBAJ_P0023647 Lbr protein_coding protein_coding MGP_CBAJ_T0023648.1 MGP_CBAJ_G0016624.1 mouse_genomes_project 1 201681371 201699580 - Lbr protein_coding retained_intron MGP_CBAJ_T0023649.1 MGP_CBAJ_G0016624.1 mouse_genomes_project 1 201712063 201722267 - MGP_CBAJ_P0023649 Lbr protein_coding protein_coding MGP_CBAJ_T0023650.1 MGP_CBAJ_G0016624.1 mouse_genomes_project 1 201712092 201721581 - MGP_CBAJ_P0023650 Lbr protein_coding protein_coding MGP_CBAJ_T0023651.1 MGP_CBAJ_G0016624.1 mouse_genomes_project 1 201712243 201722080 - MGP_CBAJ_P0023651 Lbr protein_coding protein_coding MGP_CBAJ_T0023652.1 MGP_CBAJ_G0016624.1 mouse_genomes_project 1 201717678 201721546 - MGP_CBAJ_P0023652 Lbr protein_coding protein_coding MGP_CBAJ_T0000699.1 MGP_CBAJ_G0000639.1 mouse_genomes_project 1 183413648 183414647 - TEC TEC MGP_CBAJ_T0019675.1 MGP_CBAJ_G0015790.1 mouse_genomes_project 1 62256619 62365522 + MGP_CBAJ_P0019675 Aox2 protein_coding protein_coding MGP_CBAJ_T0019676.1 MGP_CBAJ_G0015790.1 mouse_genomes_project 1 62260810 62361659 + MGP_CBAJ_P0019676 Aox2 protein_coding unknown_likely_coding MGP_CBAJ_T0019544.1 MGP_CBAJ_G0015765.1 mouse_genomes_project 1 57262664 57674393 - MGP_CBAJ_P0019544 Hecw2 protein_coding protein_coding MGP_CBAJ_T0019545.1 MGP_CBAJ_G0015765.1 mouse_genomes_project 1 57262670 57675373 - MGP_CBAJ_P0019545 Hecw2 protein_coding protein_coding MGP_CBAJ_T0019546.1 MGP_CBAJ_G0015765.1 mouse_genomes_project 1 57294158 57302687 - Hecw2 protein_coding processed_transcript MGP_CBAJ_T0019547.1 MGP_CBAJ_G0015765.1 mouse_genomes_project 1 57300532 57331341 - Hecw2 protein_coding processed_transcript MGP_CBAJ_T0019548.1 MGP_CBAJ_G0015765.1 mouse_genomes_project 1 57400173 57675373 - MGP_CBAJ_P0019548 Hecw2 protein_coding protein_coding MGP_CBAJ_T0019549.1 MGP_CBAJ_G0015765.1 mouse_genomes_project 1 57412776 57675507 - Hecw2 protein_coding retained_intron MGP_CBAJ_T0019482.1 MGP_CBAJ_G0015751.1 mouse_genomes_project 1 55783434 55804648 + MGP_CBAJ_P0019482 Nemp2 protein_coding protein_coding MGP_CBAJ_T0019483.1 MGP_CBAJ_G0015751.1 mouse_genomes_project 1 55783468 55804648 + MGP_CBAJ_P0019483 Nemp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019484.1 MGP_CBAJ_G0015751.1 mouse_genomes_project 1 55783478 55803365 + MGP_CBAJ_P0019484 Nemp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019485.1 MGP_CBAJ_G0015751.1 mouse_genomes_project 1 55783483 55803458 + Nemp2 protein_coding retained_intron MGP_CBAJ_T0019486.1 MGP_CBAJ_G0015751.1 mouse_genomes_project 1 55783528 55803431 + MGP_CBAJ_P0019486 Nemp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019487.1 MGP_CBAJ_G0015751.1 mouse_genomes_project 1 55794247 55804648 + Nemp2 protein_coding retained_intron MGP_CBAJ_T0019488.1 MGP_CBAJ_G0015751.1 mouse_genomes_project 1 55794715 55803385 + Nemp2 protein_coding processed_transcript MGP_CBAJ_T0019489.1 MGP_CBAJ_G0015751.1 mouse_genomes_project 1 55797912 55802756 + Nemp2 protein_coding retained_intron MGP_CBAJ_T0098227.1 MGP_CBAJ_G0036500.1 mouse_genomes_project 1 54939862 54941141 - Gm29453 sense_intronic sense_intronic MGP_CBAJ_T0000721.1 MGP_CBAJ_G0000661.1 mouse_genomes_project 1 196250141 196252906 - TEC TEC MGP_CBAJ_T0019311.1 MGP_CBAJ_G0015721.1 mouse_genomes_project 1 45079950 45097207 + MGP_CBAJ_P0019311 AI597479 protein_coding protein_coding MGP_CBAJ_T0020051.1 MGP_CBAJ_G0015856.1 mouse_genomes_project 1 71791238 71815749 + MGP_CBAJ_P0020051 Rpe protein_coding nonsense_mediated_decay MGP_CBAJ_T0020052.1 MGP_CBAJ_G0015856.1 mouse_genomes_project 1 71791238 71809637 + MGP_CBAJ_P0020052 Rpe protein_coding nonsense_mediated_decay MGP_CBAJ_T0020053.1 MGP_CBAJ_G0015856.1 mouse_genomes_project 1 71791238 71815749 + MGP_CBAJ_P0020053 Rpe protein_coding protein_coding MGP_CBAJ_T0020054.1 MGP_CBAJ_G0015856.1 mouse_genomes_project 1 71791238 71815749 + MGP_CBAJ_P0020054 Rpe protein_coding protein_coding MGP_CBAJ_T0020055.1 MGP_CBAJ_G0015856.1 mouse_genomes_project 1 71791314 71812213 + MGP_CBAJ_P0020055 Rpe protein_coding nonsense_mediated_decay MGP_CBAJ_T0022234.1 MGP_CBAJ_G0016315.1 mouse_genomes_project 1 165996766 166014397 + MGP_CBAJ_P0022234 Pdc protein_coding protein_coding MGP_CBAJ_T0022235.1 MGP_CBAJ_G0016315.1 mouse_genomes_project 1 165996766 166014396 + MGP_CBAJ_P0022235 Pdc protein_coding protein_coding MGP_CBAJ_T0022236.1 MGP_CBAJ_G0016315.1 mouse_genomes_project 1 165996775 166013771 + MGP_CBAJ_P0022236 Pdc protein_coding protein_coding MGP_CBAJ_T0022237.1 MGP_CBAJ_G0016315.1 mouse_genomes_project 1 165996778 166014394 + MGP_CBAJ_P0022237 Pdc protein_coding protein_coding MGP_CBAJ_T0019162.1 MGP_CBAJ_G0015688.1 mouse_genomes_project 1 39196513 39209457 - MGP_CBAJ_P0019162 Lyg2 protein_coding protein_coding MGP_CBAJ_T0099790.1 MGP_CBAJ_G0038045.1 mouse_genomes_project 1 130139371 130139502 - Gm26080 snoRNA snoRNA MGP_CBAJ_T0000462.1 MGP_CBAJ_G0000404.1 mouse_genomes_project 1 67437421 67439969 + TEC TEC MGP_CBAJ_T0011662.1 MGP_CBAJ_G0009800.1 mouse_genomes_project 1 117830933 117857840 + MGP_CBAJ_P0011662 polymorphic_pseudogene protein_coding MGP_CBAJ_T0011663.1 MGP_CBAJ_G0009800.1 mouse_genomes_project 1 117830957 117859889 + polymorphic_pseudogene processed_transcript MGP_CBAJ_T0011664.1 MGP_CBAJ_G0009800.1 mouse_genomes_project 1 117834301 117857690 + MGP_CBAJ_P0011664 polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0002808.1 MGP_CBAJ_G0002651.1 mouse_genomes_project 1 140698608 140706580 + Gm28800 antisense antisense MGP_CBAJ_T0012126.1 MGP_CBAJ_G0010238.1 mouse_genomes_project 1 159154909 159156146 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0020071.1 MGP_CBAJ_G0015860.1 mouse_genomes_project 1 72130143 72180620 - MGP_CBAJ_P0020071 Lancl1 protein_coding protein_coding MGP_CBAJ_T0020072.1 MGP_CBAJ_G0015860.1 mouse_genomes_project 1 72130143 72180613 - MGP_CBAJ_P0020072 Lancl1 protein_coding protein_coding MGP_CBAJ_T0020073.1 MGP_CBAJ_G0015860.1 mouse_genomes_project 1 72135450 72180582 - MGP_CBAJ_P0020073 Lancl1 protein_coding protein_coding MGP_CBAJ_T0020074.1 MGP_CBAJ_G0015860.1 mouse_genomes_project 1 72139092 72155262 - Lancl1 protein_coding processed_transcript MGP_CBAJ_T0020075.1 MGP_CBAJ_G0015860.1 mouse_genomes_project 1 72142029 72180582 - MGP_CBAJ_P0020075 Lancl1 protein_coding protein_coding MGP_CBAJ_T0020076.1 MGP_CBAJ_G0015860.1 mouse_genomes_project 1 72153805 72156408 - Lancl1 protein_coding retained_intron MGP_CBAJ_T0098597.1 MGP_CBAJ_G0036852.1 mouse_genomes_project 1 212772996 212773100 - Gm22446 snRNA snRNA MGP_CBAJ_T0002879.1 MGP_CBAJ_G0002706.1 mouse_genomes_project 1 188188005 188190690 + antisense antisense MGP_CBAJ_T0011802.1 MGP_CBAJ_G0009914.1 mouse_genomes_project 1 24748753 24749196 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012071.1 MGP_CBAJ_G0010183.1 mouse_genomes_project 1 130906400 130907380 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000708.1 MGP_CBAJ_G0000648.1 mouse_genomes_project 1 191289916 191290777 + TEC TEC MGP_CBAJ_T0019067.1 MGP_CBAJ_G0015673.1 mouse_genomes_project 1 37805597 37807794 + MGP_CBAJ_P0019067 protein_coding protein_coding MGP_CBAJ_T0019068.1 MGP_CBAJ_G0015673.1 mouse_genomes_project 1 37805723 37807498 + MGP_CBAJ_P0019068 protein_coding protein_coding MGP_CBAJ_T0019069.1 MGP_CBAJ_G0015673.1 mouse_genomes_project 1 37805741 37806664 + protein_coding retained_intron MGP_CBAJ_T0019070.1 MGP_CBAJ_G0015673.1 mouse_genomes_project 1 37805755 37806621 + protein_coding retained_intron MGP_CBAJ_T0019071.1 MGP_CBAJ_G0015673.1 mouse_genomes_project 1 37805757 37807497 + protein_coding processed_transcript MGP_CBAJ_T0019072.1 MGP_CBAJ_G0015673.1 mouse_genomes_project 1 37805801 37807498 + MGP_CBAJ_P0019072 protein_coding protein_coding MGP_CBAJ_T0000697.1 MGP_CBAJ_G0000637.1 mouse_genomes_project 1 183083116 183083925 + TEC TEC MGP_CBAJ_T0000474.1 MGP_CBAJ_G0000416.1 mouse_genomes_project 1 73934863 73936932 - TEC TEC MGP_CBAJ_T0011914.1 MGP_CBAJ_G0010026.1 mouse_genomes_project 1 62639558 62639910 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0021337.1 MGP_CBAJ_G0016120.1 mouse_genomes_project 1 117679674 117715369 + MGP_CBAJ_P0021337 Serpinb7 protein_coding protein_coding MGP_CBAJ_T0021338.1 MGP_CBAJ_G0016120.1 mouse_genomes_project 1 117702590 117731491 + MGP_CBAJ_P0021338 Serpinb7 protein_coding protein_coding MGP_CBAJ_T0011869.1 MGP_CBAJ_G0009981.1 mouse_genomes_project 1 47859089 47859826 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011124.1 MGP_CBAJ_G0009262.1 mouse_genomes_project 1 79331322 79331476 + Gm27315 misc_RNA misc_RNA MGP_CBAJ_T0000398.1 MGP_CBAJ_G0000341.1 mouse_genomes_project 1 33622730 33627736 - TEC TEC MGP_CBAJ_T0012046.1 MGP_CBAJ_G0010158.1 mouse_genomes_project 1 119038314 119038492 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005875.1 MGP_CBAJ_G0004917.1 mouse_genomes_project 1 177778509 177778973 + Gm38060 lincRNA lincRNA MGP_CBAJ_T0012048.1 MGP_CBAJ_G0010160.1 mouse_genomes_project 1 119482638 119483765 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005704.1 MGP_CBAJ_G0004778.1 mouse_genomes_project 1 79484517 79491947 + Gm29186 lincRNA lincRNA MGP_CBAJ_T0012009.1 MGP_CBAJ_G0010121.1 mouse_genomes_project 1 101392238 101395614 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023903.1 MGP_CBAJ_G0016675.1 mouse_genomes_project 1 212084785 212087019 - MGP_CBAJ_P0023903 Fam71a protein_coding protein_coding MGP_CBAJ_T0009406.1 MGP_CBAJ_G0007544.1 mouse_genomes_project 1 107722252 107722362 + Gm26134 miRNA miRNA MGP_CBAJ_T0098517.1 MGP_CBAJ_G0036772.1 mouse_genomes_project 1 25010668 25010772 + Gm25294 snRNA snRNA MGP_CBAJ_T0019260.1 MGP_CBAJ_G0015709.1 mouse_genomes_project 1 41926526 41931358 + Il1rl2 protein_coding retained_intron MGP_CBAJ_T0019261.1 MGP_CBAJ_G0015709.1 mouse_genomes_project 1 41926543 41972370 + MGP_CBAJ_P0019261 Il1rl2 protein_coding protein_coding MGP_CBAJ_T0019262.1 MGP_CBAJ_G0015709.1 mouse_genomes_project 1 41926606 41974461 + MGP_CBAJ_P0019262 Il1rl2 protein_coding protein_coding MGP_CBAJ_T0019263.1 MGP_CBAJ_G0015709.1 mouse_genomes_project 1 41927527 41931088 + MGP_CBAJ_P0019263 Il1rl2 protein_coding protein_coding MGP_CBAJ_T0101477.1 MGP_CBAJ_G0039509.1 mouse_genomes_project 1 114551506 114552866 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0000357.1 MGP_CBAJ_G0000302.1 mouse_genomes_project 1 13062484 13066805 + TEC TEC MGP_CBAJ_T0098577.1 MGP_CBAJ_G0036832.1 mouse_genomes_project 1 167051979 167052070 - Gm24402 snRNA snRNA MGP_CBAJ_T0000323.1 MGP_CBAJ_G0000268.1 mouse_genomes_project 1 606685 608742 - TEC TEC MGP_CBAJ_T0020531.1 MGP_CBAJ_G0015939.1 mouse_genomes_project 1 84745443 84882503 + MGP_CBAJ_P0020531 Sgpp2 protein_coding protein_coding MGP_CBAJ_T0005783.1 MGP_CBAJ_G0004844.1 mouse_genomes_project 1 124264576 124267058 + lincRNA lincRNA MGP_CBAJ_T0000523.1 MGP_CBAJ_G0000465.1 mouse_genomes_project 1 95527423 95528247 + TEC TEC MGP_CBAJ_T0019041.1 MGP_CBAJ_G0015668.1 mouse_genomes_project 1 37585659 37604099 + MGP_CBAJ_P0019041 Cnnm3 protein_coding protein_coding MGP_CBAJ_T0019042.1 MGP_CBAJ_G0015668.1 mouse_genomes_project 1 37585659 37604099 + MGP_CBAJ_P0019042 Cnnm3 protein_coding protein_coding MGP_CBAJ_T0019043.1 MGP_CBAJ_G0015668.1 mouse_genomes_project 1 37586889 37596297 + Cnnm3 protein_coding retained_intron MGP_CBAJ_T0019044.1 MGP_CBAJ_G0015668.1 mouse_genomes_project 1 37594430 37595436 + Cnnm3 protein_coding retained_intron MGP_CBAJ_T0019045.1 MGP_CBAJ_G0015668.1 mouse_genomes_project 1 37596622 37601462 + Cnnm3 protein_coding retained_intron MGP_CBAJ_T0000435.1 MGP_CBAJ_G0000377.1 mouse_genomes_project 1 55806536 55808422 - TEC TEC MGP_CBAJ_T0021831.1 MGP_CBAJ_G0016228.1 mouse_genomes_project 1 146817104 146840559 + MGP_CBAJ_P0021831 Ren1 protein_coding protein_coding MGP_CBAJ_T0021832.1 MGP_CBAJ_G0016228.1 mouse_genomes_project 1 146826705 146828781 + MGP_CBAJ_P0021832 Ren1 protein_coding protein_coding MGP_CBAJ_T0000709.1 MGP_CBAJ_G0000649.1 mouse_genomes_project 1 194332721 194334531 - TEC TEC MGP_CBAJ_T0023363.1 MGP_CBAJ_G0016554.1 mouse_genomes_project 1 192813117 192827632 - MGP_CBAJ_P0023363 Mndal protein_coding protein_coding MGP_CBAJ_T0005799.1 MGP_CBAJ_G0004857.1 mouse_genomes_project 1 132833873 132835208 + Gm29347 lincRNA lincRNA MGP_CBAJ_T0011991.1 MGP_CBAJ_G0010103.1 mouse_genomes_project 1 90343118 90343906 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011904.1 MGP_CBAJ_G0010016.1 mouse_genomes_project 1 58730186 58730980 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023909.1 MGP_CBAJ_G0016679.1 mouse_genomes_project 1 212293900 212341665 - MGP_CBAJ_P0023909 Ppp2r5a protein_coding protein_coding MGP_CBAJ_T0023910.1 MGP_CBAJ_G0016679.1 mouse_genomes_project 1 212298451 212300112 - Ppp2r5a protein_coding retained_intron MGP_CBAJ_T0023911.1 MGP_CBAJ_G0016679.1 mouse_genomes_project 1 212299980 212330630 - Ppp2r5a protein_coding processed_transcript MGP_CBAJ_T0023912.1 MGP_CBAJ_G0016679.1 mouse_genomes_project 1 212300606 212312361 - MGP_CBAJ_P0023912 Ppp2r5a protein_coding nonsense_mediated_decay MGP_CBAJ_T0023913.1 MGP_CBAJ_G0016679.1 mouse_genomes_project 1 212305366 212312350 - Ppp2r5a protein_coding retained_intron MGP_CBAJ_T0023914.1 MGP_CBAJ_G0016679.1 mouse_genomes_project 1 212317774 212344051 - Ppp2r5a protein_coding processed_transcript MGP_CBAJ_T0023915.1 MGP_CBAJ_G0016679.1 mouse_genomes_project 1 212343411 212347826 - Ppp2r5a protein_coding retained_intron MGP_CBAJ_T0000525.1 MGP_CBAJ_G0000467.1 mouse_genomes_project 1 96549828 96551589 + TEC TEC MGP_CBAJ_T0098174.1 MGP_CBAJ_G0036447.1 mouse_genomes_project 1 95423882 95424147 + Scarna6 scaRNA scaRNA MGP_CBAJ_T0012161.1 MGP_CBAJ_G0010273.1 mouse_genomes_project 1 174184592 174185197 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0021906.1 MGP_CBAJ_G0016247.1 mouse_genomes_project 1 148040522 148045552 + MGP_CBAJ_P0021906 4933406M09Rik protein_coding protein_coding MGP_CBAJ_T0005859.1 MGP_CBAJ_G0004906.1 mouse_genomes_project 1 170430566 170439880 - 4930452N14Rik lincRNA lincRNA MGP_CBAJ_T0023488.1 MGP_CBAJ_G0016592.1 mouse_genomes_project 1 197965096 198161566 + Kif26b protein_coding retained_intron MGP_CBAJ_T0023489.1 MGP_CBAJ_G0016592.1 mouse_genomes_project 1 197965096 198409160 + MGP_CBAJ_P0023489 Kif26b protein_coding protein_coding MGP_CBAJ_T0023490.1 MGP_CBAJ_G0016592.1 mouse_genomes_project 1 198255486 198402817 + MGP_CBAJ_P0023490 Kif26b protein_coding protein_coding MGP_CBAJ_T0005893.1 MGP_CBAJ_G0004931.1 mouse_genomes_project 1 183325901 183327189 - Gm36972 lincRNA lincRNA MGP_CBAJ_T0019943.1 MGP_CBAJ_G0015832.1 mouse_genomes_project 1 68396092 68465693 - MGP_CBAJ_P0019943 Dytn protein_coding protein_coding MGP_CBAJ_T0019944.1 MGP_CBAJ_G0015832.1 mouse_genomes_project 1 68437480 68465676 - Dytn protein_coding retained_intron MGP_CBAJ_T0019757.1 MGP_CBAJ_G0015803.1 mouse_genomes_project 1 63241431 63290251 - MGP_CBAJ_P0019757 Als2cr11 protein_coding protein_coding MGP_CBAJ_T0019758.1 MGP_CBAJ_G0015803.1 mouse_genomes_project 1 63262333 63279966 - Als2cr11 protein_coding processed_transcript MGP_CBAJ_T0009414.1 MGP_CBAJ_G0007552.1 mouse_genomes_project 1 146313260 146313381 - Gm44300 miRNA miRNA MGP_CBAJ_T0002856.1 MGP_CBAJ_G0002689.1 mouse_genomes_project 1 177141068 177332410 + Gm36975 antisense antisense MGP_CBAJ_T0000728.1 MGP_CBAJ_G0000667.1 mouse_genomes_project 1 199732255 199734927 - TEC TEC MGP_CBAJ_T0023039.1 MGP_CBAJ_G0016472.1 mouse_genomes_project 1 188761037 188945325 - MGP_CBAJ_P0023039 Atf6 protein_coding unknown_likely_coding MGP_CBAJ_T0023040.1 MGP_CBAJ_G0016472.1 mouse_genomes_project 1 188854278 188856440 - Atf6 protein_coding retained_intron MGP_CBAJ_T0097868.1 MGP_CBAJ_G0036141.1 mouse_genomes_project 1 79735385 79735511 + Gm25329 rRNA rRNA MGP_CBAJ_T0000461.1 MGP_CBAJ_G0000403.1 mouse_genomes_project 1 66836409 66838927 + TEC TEC MGP_CBAJ_T0020779.1 MGP_CBAJ_G0015995.1 mouse_genomes_project 1 94180138 94238189 + Dis3l2 protein_coding processed_transcript MGP_CBAJ_T0020780.1 MGP_CBAJ_G0015995.1 mouse_genomes_project 1 94180149 94591343 + MGP_CBAJ_P0020780 Dis3l2 protein_coding protein_coding MGP_CBAJ_T0020781.1 MGP_CBAJ_G0015995.1 mouse_genomes_project 1 94180158 94391907 + Dis3l2 protein_coding retained_intron MGP_CBAJ_T0020782.1 MGP_CBAJ_G0015995.1 mouse_genomes_project 1 94180158 94590443 + MGP_CBAJ_P0020782 Dis3l2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020783.1 MGP_CBAJ_G0015995.1 mouse_genomes_project 1 94180173 94591340 + MGP_CBAJ_P0020783 Dis3l2 protein_coding protein_coding MGP_CBAJ_T0020784.1 MGP_CBAJ_G0015995.1 mouse_genomes_project 1 94361788 94362523 + Dis3l2 protein_coding retained_intron MGP_CBAJ_T0021941.1 MGP_CBAJ_G0016255.1 mouse_genomes_project 1 148430246 148653073 - MGP_CBAJ_P0021941 Ppp1r12b protein_coding protein_coding MGP_CBAJ_T0021942.1 MGP_CBAJ_G0016255.1 mouse_genomes_project 1 148431151 148435970 - Ppp1r12b protein_coding processed_transcript MGP_CBAJ_T0021943.1 MGP_CBAJ_G0016255.1 mouse_genomes_project 1 148434681 148526528 - Ppp1r12b protein_coding processed_transcript MGP_CBAJ_T0021944.1 MGP_CBAJ_G0016255.1 mouse_genomes_project 1 148435585 148652984 - MGP_CBAJ_P0021944 Ppp1r12b protein_coding protein_coding MGP_CBAJ_T0021945.1 MGP_CBAJ_G0016255.1 mouse_genomes_project 1 148441525 148653073 - MGP_CBAJ_P0021945 Ppp1r12b protein_coding protein_coding MGP_CBAJ_T0021946.1 MGP_CBAJ_G0016255.1 mouse_genomes_project 1 148456094 148483583 - Ppp1r12b protein_coding retained_intron MGP_CBAJ_T0021947.1 MGP_CBAJ_G0016255.1 mouse_genomes_project 1 148459968 148462349 - Ppp1r12b protein_coding retained_intron MGP_CBAJ_T0021948.1 MGP_CBAJ_G0016255.1 mouse_genomes_project 1 148514159 148515918 - Ppp1r12b protein_coding processed_transcript MGP_CBAJ_T0021949.1 MGP_CBAJ_G0016255.1 mouse_genomes_project 1 148514162 148653061 - Ppp1r12b protein_coding retained_intron MGP_CBAJ_T0021950.1 MGP_CBAJ_G0016255.1 mouse_genomes_project 1 148640862 148653075 - MGP_CBAJ_P0021950 Ppp1r12b protein_coding protein_coding MGP_CBAJ_T0000442.1 MGP_CBAJ_G0000384.1 mouse_genomes_project 1 59237427 59239023 + TEC TEC MGP_CBAJ_T0021748.1 MGP_CBAJ_G0016211.1 mouse_genomes_project 1 145640670 145657609 + MGP_CBAJ_P0021748 Nuak2 protein_coding protein_coding MGP_CBAJ_T0021749.1 MGP_CBAJ_G0016211.1 mouse_genomes_project 1 145640670 145657804 + MGP_CBAJ_P0021749 Nuak2 protein_coding protein_coding MGP_CBAJ_T0021750.1 MGP_CBAJ_G0016211.1 mouse_genomes_project 1 145640709 145642281 + Nuak2 protein_coding processed_transcript MGP_CBAJ_T0021751.1 MGP_CBAJ_G0016211.1 mouse_genomes_project 1 145652138 145654768 + Nuak2 protein_coding retained_intron MGP_CBAJ_T0000516.1 MGP_CBAJ_G0000458.1 mouse_genomes_project 1 94330365 94333342 + TEC TEC MGP_CBAJ_T0011743.1 MGP_CBAJ_G0009855.1 mouse_genomes_project 1 5227319 5229414 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011915.1 MGP_CBAJ_G0010027.1 mouse_genomes_project 1 62650195 62657129 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0018836.1 MGP_CBAJ_G0015630.1 mouse_genomes_project 1 23360921 23370624 - MGP_CBAJ_P0018836 Sdhaf4 protein_coding protein_coding MGP_CBAJ_T0018837.1 MGP_CBAJ_G0015630.1 mouse_genomes_project 1 23367928 23370598 - Sdhaf4 protein_coding processed_transcript MGP_CBAJ_T0098568.1 MGP_CBAJ_G0036823.1 mouse_genomes_project 1 149128160 149128266 - Gm22796 snRNA snRNA MGP_CBAJ_T0005753.1 MGP_CBAJ_G0004820.1 mouse_genomes_project 1 100237831 100241409 + Gm26720 lincRNA lincRNA MGP_CBAJ_T0012023.1 MGP_CBAJ_G0010135.1 mouse_genomes_project 1 109701126 109701582 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000505.1 MGP_CBAJ_G0000447.1 mouse_genomes_project 1 90362572 90363861 - TEC TEC MGP_CBAJ_T0016770.1 MGP_CBAJ_G0014850.1 mouse_genomes_project 1 148828563 148829501 - Ptprv processed_transcript retained_intron MGP_CBAJ_T0016771.1 MGP_CBAJ_G0014850.1 mouse_genomes_project 1 148828564 148852378 - Ptprv processed_transcript processed_transcript MGP_CBAJ_T0016772.1 MGP_CBAJ_G0014850.1 mouse_genomes_project 1 148828566 148829373 - Ptprv processed_transcript processed_transcript MGP_CBAJ_T0016773.1 MGP_CBAJ_G0014850.1 mouse_genomes_project 1 148828693 148829654 - Ptprv processed_transcript processed_transcript MGP_CBAJ_T0016774.1 MGP_CBAJ_G0014850.1 mouse_genomes_project 1 148830077 148830526 - Ptprv processed_transcript retained_intron MGP_CBAJ_T0016775.1 MGP_CBAJ_G0014850.1 mouse_genomes_project 1 148830336 148831602 - Ptprv processed_transcript retained_intron MGP_CBAJ_T0016776.1 MGP_CBAJ_G0014850.1 mouse_genomes_project 1 148831230 148832156 - Ptprv processed_transcript processed_transcript MGP_CBAJ_T0016777.1 MGP_CBAJ_G0014850.1 mouse_genomes_project 1 148846243 148852352 - Ptprv processed_transcript processed_transcript MGP_CBAJ_T0016778.1 MGP_CBAJ_G0014850.1 mouse_genomes_project 1 148846261 148848155 - Ptprv processed_transcript retained_intron MGP_CBAJ_T0016779.1 MGP_CBAJ_G0014850.1 mouse_genomes_project 1 148849344 148850948 - Ptprv processed_transcript processed_transcript MGP_CBAJ_T0016780.1 MGP_CBAJ_G0014850.1 mouse_genomes_project 1 148849455 148852327 - Ptprv processed_transcript processed_transcript MGP_CBAJ_T0020017.1 MGP_CBAJ_G0015852.1 mouse_genomes_project 1 70209220 70285510 + MGP_CBAJ_P0020017 Pth2r protein_coding protein_coding MGP_CBAJ_T0020018.1 MGP_CBAJ_G0015852.1 mouse_genomes_project 1 70239322 70336362 + MGP_CBAJ_P0020018 Pth2r protein_coding protein_coding MGP_CBAJ_T0000626.1 MGP_CBAJ_G0000566.1 mouse_genomes_project 1 153195434 153198227 + TEC TEC MGP_CBAJ_T0005642.1 MGP_CBAJ_G0004734.1 mouse_genomes_project 1 54784645 54786222 - Gm28055 lincRNA lincRNA MGP_CBAJ_T0005643.1 MGP_CBAJ_G0004734.1 mouse_genomes_project 1 54785446 54837279 - Gm28055 lincRNA lincRNA MGP_CBAJ_T0009422.1 MGP_CBAJ_G0007560.1 mouse_genomes_project 1 171587532 171587644 + Gm22569 miRNA miRNA MGP_CBAJ_T0000374.1 MGP_CBAJ_G0000317.1 mouse_genomes_project 1 24850127 24853502 - TEC TEC MGP_CBAJ_T0011842.1 MGP_CBAJ_G0009954.1 mouse_genomes_project 1 35801609 35803746 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101448.1 MGP_CBAJ_G0039480.1 mouse_genomes_project 1 56629683 56631854 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0023368.1 MGP_CBAJ_G0016558.1 mouse_genomes_project 1 192883433 192889211 + MGP_CBAJ_P0023368 Olfr429 protein_coding protein_coding MGP_CBAJ_T0023369.1 MGP_CBAJ_G0016558.1 mouse_genomes_project 1 192888268 192889211 + MGP_CBAJ_P0023369 Olfr429 protein_coding protein_coding MGP_CBAJ_T0098569.1 MGP_CBAJ_G0036824.1 mouse_genomes_project 1 150611481 150611579 + Gm24086 snRNA snRNA MGP_CBAJ_T0005823.1 MGP_CBAJ_G0004878.1 mouse_genomes_project 1 150108589 150111403 + lincRNA lincRNA MGP_CBAJ_T0011782.1 MGP_CBAJ_G0009894.1 mouse_genomes_project 1 17827026 17827305 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098225.1 MGP_CBAJ_G0036498.1 mouse_genomes_project 1 39388641 39389652 - Gm37062 sense_intronic sense_intronic MGP_CBAJ_T0002796.1 MGP_CBAJ_G0002644.1 mouse_genomes_project 1 114881883 114882782 - Gm15699 antisense antisense MGP_CBAJ_T0002889.1 MGP_CBAJ_G0002715.1 mouse_genomes_project 1 195820085 195824391 + Gm36992 antisense antisense MGP_CBAJ_T0018622.1 MGP_CBAJ_G0015580.1 mouse_genomes_project 1 8158757 8578426 - MGP_CBAJ_P0018622 Cpa6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018623.1 MGP_CBAJ_G0015580.1 mouse_genomes_project 1 8158764 8578426 - MGP_CBAJ_P0018623 Cpa6 protein_coding protein_coding MGP_CBAJ_T0018624.1 MGP_CBAJ_G0015580.1 mouse_genomes_project 1 8311252 8316162 - Cpa6 protein_coding retained_intron MGP_CBAJ_T0018625.1 MGP_CBAJ_G0015580.1 mouse_genomes_project 1 8436338 8578386 - Cpa6 protein_coding processed_transcript MGP_CBAJ_T0000742.1 MGP_CBAJ_G0000680.1 mouse_genomes_project 1 202680348 202682302 + TEC TEC MGP_CBAJ_T0005677.1 MGP_CBAJ_G0004760.1 mouse_genomes_project 1 69008889 69137746 - Gm28981 lincRNA lincRNA MGP_CBAJ_T0019360.1 MGP_CBAJ_G0015731.1 mouse_genomes_project 1 46201808 46209419 + MGP_CBAJ_P0019360 protein_coding protein_coding MGP_CBAJ_T0019361.1 MGP_CBAJ_G0015731.1 mouse_genomes_project 1 46201851 46209182 + protein_coding processed_transcript MGP_CBAJ_T0019362.1 MGP_CBAJ_G0015731.1 mouse_genomes_project 1 46202294 46228106 + MGP_CBAJ_P0019362 protein_coding unknown_likely_coding MGP_CBAJ_T0019363.1 MGP_CBAJ_G0015731.1 mouse_genomes_project 1 46202359 46209200 + protein_coding processed_transcript MGP_CBAJ_T0019364.1 MGP_CBAJ_G0015731.1 mouse_genomes_project 1 46202829 46209260 + MGP_CBAJ_P0019364 protein_coding protein_coding MGP_CBAJ_T0099823.1 MGP_CBAJ_G0038078.1 mouse_genomes_project 1 189497537 189497628 + Gm25151 snoRNA snoRNA MGP_CBAJ_T0018634.1 MGP_CBAJ_G0015582.1 mouse_genomes_project 1 9303315 9529316 + MGP_CBAJ_P0018634 A830018L16Rik protein_coding protein_coding MGP_CBAJ_T0018635.1 MGP_CBAJ_G0015582.1 mouse_genomes_project 1 9303315 9926265 + MGP_CBAJ_P0018635 A830018L16Rik protein_coding protein_coding MGP_CBAJ_T0018636.1 MGP_CBAJ_G0015582.1 mouse_genomes_project 1 9303322 9421885 + A830018L16Rik protein_coding processed_transcript MGP_CBAJ_T0018637.1 MGP_CBAJ_G0015582.1 mouse_genomes_project 1 9303322 9454712 + A830018L16Rik protein_coding processed_transcript MGP_CBAJ_T0018638.1 MGP_CBAJ_G0015582.1 mouse_genomes_project 1 9303322 9868130 + MGP_CBAJ_P0018638 A830018L16Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0018639.1 MGP_CBAJ_G0015582.1 mouse_genomes_project 1 9303480 9529126 + MGP_CBAJ_P0018639 A830018L16Rik protein_coding protein_coding MGP_CBAJ_T0018640.1 MGP_CBAJ_G0015582.1 mouse_genomes_project 1 9303720 9925761 + MGP_CBAJ_P0018640 A830018L16Rik protein_coding protein_coding MGP_CBAJ_T0018641.1 MGP_CBAJ_G0015582.1 mouse_genomes_project 1 9303720 9925761 + MGP_CBAJ_P0018641 A830018L16Rik protein_coding protein_coding MGP_CBAJ_T0018642.1 MGP_CBAJ_G0015582.1 mouse_genomes_project 1 9421846 9525276 + MGP_CBAJ_P0018642 A830018L16Rik protein_coding protein_coding MGP_CBAJ_T0018643.1 MGP_CBAJ_G0015582.1 mouse_genomes_project 1 9504697 9521956 + A830018L16Rik protein_coding processed_transcript MGP_CBAJ_T0012112.1 MGP_CBAJ_G0010224.1 mouse_genomes_project 1 152496976 152497127 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009428.1 MGP_CBAJ_G0007566.1 mouse_genomes_project 1 179868462 179868525 - Gm27616 miRNA miRNA MGP_CBAJ_T0000466.1 MGP_CBAJ_G0000408.1 mouse_genomes_project 1 71870407 71873510 - TEC TEC MGP_CBAJ_T0019892.1 MGP_CBAJ_G0015825.1 mouse_genomes_project 1 67321863 67362864 + Nrp2 protein_coding retained_intron MGP_CBAJ_T0019893.1 MGP_CBAJ_G0015825.1 mouse_genomes_project 1 67321863 67448519 + MGP_CBAJ_P0019893 Nrp2 protein_coding protein_coding MGP_CBAJ_T0019894.1 MGP_CBAJ_G0015825.1 mouse_genomes_project 1 67321863 67448519 + MGP_CBAJ_P0019894 Nrp2 protein_coding protein_coding MGP_CBAJ_T0019895.1 MGP_CBAJ_G0015825.1 mouse_genomes_project 1 67322280 67448519 + MGP_CBAJ_P0019895 Nrp2 protein_coding protein_coding MGP_CBAJ_T0019896.1 MGP_CBAJ_G0015825.1 mouse_genomes_project 1 67322280 67422812 + MGP_CBAJ_P0019896 Nrp2 protein_coding protein_coding MGP_CBAJ_T0019897.1 MGP_CBAJ_G0015825.1 mouse_genomes_project 1 67322280 67425069 + MGP_CBAJ_P0019897 Nrp2 protein_coding protein_coding MGP_CBAJ_T0019898.1 MGP_CBAJ_G0015825.1 mouse_genomes_project 1 67322280 67448519 + MGP_CBAJ_P0019898 Nrp2 protein_coding protein_coding MGP_CBAJ_T0021134.1 MGP_CBAJ_G0016074.1 mouse_genomes_project 1 101539217 101549482 + MGP_CBAJ_P0021134 Agxt protein_coding protein_coding MGP_CBAJ_T0021135.1 MGP_CBAJ_G0016074.1 mouse_genomes_project 1 101539545 101541989 + Agxt protein_coding retained_intron MGP_CBAJ_T0021136.1 MGP_CBAJ_G0016074.1 mouse_genomes_project 1 101543936 101549478 + Agxt protein_coding processed_transcript MGP_CBAJ_T0099781.1 MGP_CBAJ_G0038036.1 mouse_genomes_project 1 111753556 111753688 - Gm24122 snoRNA snoRNA MGP_CBAJ_T0002784.1 MGP_CBAJ_G0002634.1 mouse_genomes_project 1 100030402 100034792 - Gm29100 antisense antisense MGP_CBAJ_T0011819.1 MGP_CBAJ_G0009931.1 mouse_genomes_project 1 31711750 31712314 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0023937.1 MGP_CBAJ_G0016684.1 mouse_genomes_project 1 212943865 212950341 + MGP_CBAJ_P0023937 Slc30a1 protein_coding protein_coding MGP_CBAJ_T0023938.1 MGP_CBAJ_G0016684.1 mouse_genomes_project 1 212944354 212946273 + MGP_CBAJ_P0023938 Slc30a1 protein_coding protein_coding MGP_CBAJ_T0002876.1 MGP_CBAJ_G0002704.1 mouse_genomes_project 1 184919772 184928802 + Gm37982 antisense antisense MGP_CBAJ_T0002793.1 MGP_CBAJ_G0002643.1 mouse_genomes_project 1 105877167 105921640 + Panct2 antisense antisense MGP_CBAJ_T0002794.1 MGP_CBAJ_G0002643.1 mouse_genomes_project 1 105878262 105887199 + Panct2 antisense antisense MGP_CBAJ_T0002795.1 MGP_CBAJ_G0002643.1 mouse_genomes_project 1 105878274 105883866 + Panct2 antisense antisense MGP_CBAJ_T0005816.1 MGP_CBAJ_G0004871.1 mouse_genomes_project 1 145666279 145673574 + F730311O21Rik lincRNA lincRNA MGP_CBAJ_T0011892.1 MGP_CBAJ_G0010004.1 mouse_genomes_project 1 54373209 54374234 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011771.1 MGP_CBAJ_G0009883.1 mouse_genomes_project 1 14439569 14440122 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021492.1 MGP_CBAJ_G0016155.1 mouse_genomes_project 1 135547048 136375629 - MGP_CBAJ_P0021492 Dpp10 protein_coding protein_coding MGP_CBAJ_T0021493.1 MGP_CBAJ_G0016155.1 mouse_genomes_project 1 135560536 136375236 - MGP_CBAJ_P0021493 Dpp10 protein_coding protein_coding MGP_CBAJ_T0021494.1 MGP_CBAJ_G0016155.1 mouse_genomes_project 1 135891248 135941553 - Dpp10 protein_coding processed_transcript MGP_CBAJ_T0021495.1 MGP_CBAJ_G0016155.1 mouse_genomes_project 1 135914411 136375328 - Dpp10 protein_coding processed_transcript MGP_CBAJ_T0000368.1 MGP_CBAJ_G0000313.1 mouse_genomes_project 1 22545147 22545870 - TEC TEC MGP_CBAJ_T0000369.1 MGP_CBAJ_G0000313.1 mouse_genomes_project 1 22545449 22545869 - TEC TEC MGP_CBAJ_T0011801.1 MGP_CBAJ_G0009913.1 mouse_genomes_project 1 24516728 24518408 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0023703.1 MGP_CBAJ_G0016635.1 mouse_genomes_project 1 203094908 203253381 - MGP_CBAJ_P0023703 Disp1 protein_coding protein_coding MGP_CBAJ_T0023704.1 MGP_CBAJ_G0016635.1 mouse_genomes_project 1 203094908 203165545 - MGP_CBAJ_P0023704 Disp1 protein_coding protein_coding MGP_CBAJ_T0023705.1 MGP_CBAJ_G0016635.1 mouse_genomes_project 1 203094908 203253376 - MGP_CBAJ_P0023705 Disp1 protein_coding protein_coding MGP_CBAJ_T0023706.1 MGP_CBAJ_G0016635.1 mouse_genomes_project 1 203104836 203165615 - Disp1 protein_coding retained_intron MGP_CBAJ_T0023707.1 MGP_CBAJ_G0016635.1 mouse_genomes_project 1 203147090 203253413 - MGP_CBAJ_P0023707 Disp1 protein_coding protein_coding MGP_CBAJ_T0009355.1 MGP_CBAJ_G0007493.1 mouse_genomes_project 1 29487607 29487695 + Gm22679 miRNA miRNA MGP_CBAJ_T0011735.1 MGP_CBAJ_G0009847.1 mouse_genomes_project 1 4494550 4494875 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0023356.1 MGP_CBAJ_G0016549.1 mouse_genomes_project 1 192190128 192199167 + MGP_CBAJ_P0023356 Pyhin1 protein_coding protein_coding MGP_CBAJ_T0101001.1 MGP_CBAJ_G0039249.1 mouse_genomes_project 1 173956184 173964010 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101002.1 MGP_CBAJ_G0039249.1 mouse_genomes_project 1 173956472 173964007 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101003.1 MGP_CBAJ_G0039249.1 mouse_genomes_project 1 173956810 173957104 + transcribed_processed_pseudogene TEC MGP_CBAJ_T0101004.1 MGP_CBAJ_G0039249.1 mouse_genomes_project 1 173963675 173963926 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0099738.1 MGP_CBAJ_G0037993.1 mouse_genomes_project 1 16069210 16069321 + Gm25166 snoRNA snoRNA MGP_CBAJ_T0022129.1 MGP_CBAJ_G0016292.1 mouse_genomes_project 1 153126571 153234047 + MGP_CBAJ_P0022129 Dennd1b protein_coding protein_coding MGP_CBAJ_T0022130.1 MGP_CBAJ_G0016292.1 mouse_genomes_project 1 153126845 153356746 + MGP_CBAJ_P0022130 Dennd1b protein_coding protein_coding MGP_CBAJ_T0022131.1 MGP_CBAJ_G0016292.1 mouse_genomes_project 1 153126864 153257880 + MGP_CBAJ_P0022131 Dennd1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0022132.1 MGP_CBAJ_G0016292.1 mouse_genomes_project 1 153127005 153359652 + MGP_CBAJ_P0022132 Dennd1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0022133.1 MGP_CBAJ_G0016292.1 mouse_genomes_project 1 153130810 153356746 + MGP_CBAJ_P0022133 Dennd1b protein_coding protein_coding MGP_CBAJ_T0022134.1 MGP_CBAJ_G0016292.1 mouse_genomes_project 1 153224511 153227276 + Dennd1b protein_coding retained_intron MGP_CBAJ_T0022135.1 MGP_CBAJ_G0016292.1 mouse_genomes_project 1 153257875 153309891 + Dennd1b protein_coding retained_intron MGP_CBAJ_T0022136.1 MGP_CBAJ_G0016292.1 mouse_genomes_project 1 153299662 153356686 + Dennd1b protein_coding processed_transcript MGP_CBAJ_T0022137.1 MGP_CBAJ_G0016292.1 mouse_genomes_project 1 153307257 153354797 + Dennd1b protein_coding processed_transcript MGP_CBAJ_T0000723.1 MGP_CBAJ_G0000663.1 mouse_genomes_project 1 196778144 196779375 - TEC TEC MGP_CBAJ_T0019031.1 MGP_CBAJ_G0015666.1 mouse_genomes_project 1 37488477 37508495 - MGP_CBAJ_P0019031 Lman2l protein_coding protein_coding MGP_CBAJ_T0019032.1 MGP_CBAJ_G0015666.1 mouse_genomes_project 1 37490671 37516639 - MGP_CBAJ_P0019032 Lman2l protein_coding protein_coding MGP_CBAJ_T0019033.1 MGP_CBAJ_G0015666.1 mouse_genomes_project 1 37491800 37510664 - Lman2l protein_coding retained_intron MGP_CBAJ_T0019034.1 MGP_CBAJ_G0015666.1 mouse_genomes_project 1 37491800 37516639 - MGP_CBAJ_P0019034 Lman2l protein_coding nonsense_mediated_decay MGP_CBAJ_T0019035.1 MGP_CBAJ_G0015666.1 mouse_genomes_project 1 37491800 37516639 - MGP_CBAJ_P0019035 Lman2l protein_coding protein_coding MGP_CBAJ_T0019036.1 MGP_CBAJ_G0015666.1 mouse_genomes_project 1 37493146 37497008 - MGP_CBAJ_P0019036 Lman2l protein_coding protein_coding MGP_CBAJ_T0019037.1 MGP_CBAJ_G0015666.1 mouse_genomes_project 1 37497033 37516639 - MGP_CBAJ_P0019037 Lman2l protein_coding nonsense_mediated_decay MGP_CBAJ_T0019038.1 MGP_CBAJ_G0015666.1 mouse_genomes_project 1 37512540 37516625 - Lman2l protein_coding retained_intron MGP_CBAJ_T0000581.1 MGP_CBAJ_G0000523.1 mouse_genomes_project 1 140905860 140908599 + TEC TEC MGP_CBAJ_T0020203.1 MGP_CBAJ_G0015889.1 mouse_genomes_project 1 80307684 80323309 - MGP_CBAJ_P0020203 protein_coding unknown_likely_coding MGP_CBAJ_T0020204.1 MGP_CBAJ_G0015889.1 mouse_genomes_project 1 80307689 80323793 - protein_coding retained_intron MGP_CBAJ_T0020205.1 MGP_CBAJ_G0015889.1 mouse_genomes_project 1 80307689 80315085 - protein_coding retained_intron MGP_CBAJ_T0020206.1 MGP_CBAJ_G0015889.1 mouse_genomes_project 1 80308738 80310653 - MGP_CBAJ_P0020206 protein_coding protein_coding MGP_CBAJ_T0020207.1 MGP_CBAJ_G0015889.1 mouse_genomes_project 1 80312987 80323657 - protein_coding processed_transcript MGP_CBAJ_T0020208.1 MGP_CBAJ_G0015889.1 mouse_genomes_project 1 80313335 80325065 - MGP_CBAJ_P0020208 protein_coding protein_coding MGP_CBAJ_T0020209.1 MGP_CBAJ_G0015889.1 mouse_genomes_project 1 80313352 80323562 - MGP_CBAJ_P0020209 protein_coding protein_coding MGP_CBAJ_T0019392.1 MGP_CBAJ_G0015737.1 mouse_genomes_project 1 48075199 48104596 + MGP_CBAJ_P0019392 Wdr75 protein_coding protein_coding MGP_CBAJ_T0019393.1 MGP_CBAJ_G0015737.1 mouse_genomes_project 1 48075482 48104581 + Wdr75 protein_coding retained_intron MGP_CBAJ_T0019394.1 MGP_CBAJ_G0015737.1 mouse_genomes_project 1 48075536 48082218 + Wdr75 protein_coding retained_intron MGP_CBAJ_T0019395.1 MGP_CBAJ_G0015737.1 mouse_genomes_project 1 48075540 48083791 + MGP_CBAJ_P0019395 Wdr75 protein_coding protein_coding MGP_CBAJ_T0019396.1 MGP_CBAJ_G0015737.1 mouse_genomes_project 1 48081851 48104492 + Wdr75 protein_coding processed_transcript MGP_CBAJ_T0019397.1 MGP_CBAJ_G0015737.1 mouse_genomes_project 1 48083548 48085318 + Wdr75 protein_coding processed_transcript MGP_CBAJ_T0019398.1 MGP_CBAJ_G0015737.1 mouse_genomes_project 1 48095657 48104596 + Wdr75 protein_coding retained_intron MGP_CBAJ_T0019399.1 MGP_CBAJ_G0015737.1 mouse_genomes_project 1 48103245 48104490 + Wdr75 protein_coding retained_intron MGP_CBAJ_T0019400.1 MGP_CBAJ_G0015737.1 mouse_genomes_project 1 48103537 48104593 + MGP_CBAJ_P0019400 Wdr75 protein_coding protein_coding MGP_CBAJ_T0000355.1 MGP_CBAJ_G0000300.1 mouse_genomes_project 1 12306239 12309842 - TEC TEC MGP_CBAJ_T0011800.1 MGP_CBAJ_G0009912.1 mouse_genomes_project 1 24404910 24406108 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0021752.1 MGP_CBAJ_G0016212.1 mouse_genomes_project 1 145680177 145719869 - MGP_CBAJ_P0021752 Tmcc2 protein_coding protein_coding MGP_CBAJ_T0021753.1 MGP_CBAJ_G0016212.1 mouse_genomes_project 1 145680178 145691748 - Tmcc2 protein_coding retained_intron MGP_CBAJ_T0021754.1 MGP_CBAJ_G0016212.1 mouse_genomes_project 1 145680178 145691749 - MGP_CBAJ_P0021754 Tmcc2 protein_coding protein_coding MGP_CBAJ_T0021755.1 MGP_CBAJ_G0016212.1 mouse_genomes_project 1 145684461 145690934 - Tmcc2 protein_coding processed_transcript MGP_CBAJ_T0021756.1 MGP_CBAJ_G0016212.1 mouse_genomes_project 1 145684888 145688811 - Tmcc2 protein_coding processed_transcript MGP_CBAJ_T0000458.1 MGP_CBAJ_G0000400.1 mouse_genomes_project 1 66194714 66200478 + TEC TEC MGP_CBAJ_T0098585.1 MGP_CBAJ_G0036840.1 mouse_genomes_project 1 189717070 189717186 - Gm24871 snRNA snRNA MGP_CBAJ_T0012092.1 MGP_CBAJ_G0010204.1 mouse_genomes_project 1 137043679 137044085 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023949.1 MGP_CBAJ_G0016687.1 mouse_genomes_project 1 213100529 213146966 - MGP_CBAJ_P0023949 Rcor3 protein_coding protein_coding MGP_CBAJ_T0023950.1 MGP_CBAJ_G0016687.1 mouse_genomes_project 1 213100544 213146996 - MGP_CBAJ_P0023950 Rcor3 protein_coding protein_coding MGP_CBAJ_T0023951.1 MGP_CBAJ_G0016687.1 mouse_genomes_project 1 213100754 213146987 - MGP_CBAJ_P0023951 Rcor3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023952.1 MGP_CBAJ_G0016687.1 mouse_genomes_project 1 213102562 213120395 - MGP_CBAJ_P0023952 Rcor3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023953.1 MGP_CBAJ_G0016687.1 mouse_genomes_project 1 213102765 213147018 - MGP_CBAJ_P0023953 Rcor3 protein_coding protein_coding MGP_CBAJ_T0023954.1 MGP_CBAJ_G0016687.1 mouse_genomes_project 1 213102885 213131015 - MGP_CBAJ_P0023954 Rcor3 protein_coding protein_coding MGP_CBAJ_T0023955.1 MGP_CBAJ_G0016687.1 mouse_genomes_project 1 213103362 213146982 - MGP_CBAJ_P0023955 Rcor3 protein_coding protein_coding MGP_CBAJ_T0023956.1 MGP_CBAJ_G0016687.1 mouse_genomes_project 1 213103366 213146883 - MGP_CBAJ_P0023956 Rcor3 protein_coding protein_coding MGP_CBAJ_T0023957.1 MGP_CBAJ_G0016687.1 mouse_genomes_project 1 213108166 213110837 - Rcor3 protein_coding retained_intron MGP_CBAJ_T0023958.1 MGP_CBAJ_G0016687.1 mouse_genomes_project 1 213136806 213140218 - Rcor3 protein_coding retained_intron MGP_CBAJ_T0023959.1 MGP_CBAJ_G0016687.1 mouse_genomes_project 1 213136950 213146619 - MGP_CBAJ_P0023959 Rcor3 protein_coding protein_coding MGP_CBAJ_T0023960.1 MGP_CBAJ_G0016687.1 mouse_genomes_project 1 213143158 213146991 - Rcor3 protein_coding retained_intron MGP_CBAJ_T0023961.1 MGP_CBAJ_G0016687.1 mouse_genomes_project 1 213145357 213146966 - Rcor3 protein_coding processed_transcript MGP_CBAJ_T0023962.1 MGP_CBAJ_G0016687.1 mouse_genomes_project 1 213145648 213146980 - Rcor3 protein_coding processed_transcript MGP_CBAJ_T0011718.1 MGP_CBAJ_G0009830.1 mouse_genomes_project 1 1461572 1465854 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0019855.1 MGP_CBAJ_G0015818.1 mouse_genomes_project 1 64740431 64780381 + Cyp20a1 protein_coding retained_intron MGP_CBAJ_T0019856.1 MGP_CBAJ_G0015818.1 mouse_genomes_project 1 64740431 64798344 + MGP_CBAJ_P0019856 Cyp20a1 protein_coding protein_coding MGP_CBAJ_T0019857.1 MGP_CBAJ_G0015818.1 mouse_genomes_project 1 64740431 64798344 + MGP_CBAJ_P0019857 Cyp20a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0002869.1 MGP_CBAJ_G0002698.1 mouse_genomes_project 1 181502813 181506522 - Gm16587 antisense antisense MGP_CBAJ_T0023268.1 MGP_CBAJ_G0016519.1 mouse_genomes_project 1 190529040 190539053 - MGP_CBAJ_P0023268 Casq1 protein_coding protein_coding MGP_CBAJ_T0023269.1 MGP_CBAJ_G0016519.1 mouse_genomes_project 1 190529041 190533109 - Casq1 protein_coding retained_intron MGP_CBAJ_T0023270.1 MGP_CBAJ_G0016519.1 mouse_genomes_project 1 190534294 190538900 - MGP_CBAJ_P0023270 Casq1 protein_coding protein_coding MGP_CBAJ_T0099765.1 MGP_CBAJ_G0038020.1 mouse_genomes_project 1 67856923 67857001 + Gm26457 snoRNA snoRNA MGP_CBAJ_T0000584.1 MGP_CBAJ_G0000526.1 mouse_genomes_project 1 142319747 142320706 + TEC TEC MGP_CBAJ_T0018554.1 MGP_CBAJ_G0015572.1 mouse_genomes_project 1 7441657 7470532 - MGP_CBAJ_P0018554 Vcpip1 protein_coding protein_coding MGP_CBAJ_T0000457.1 MGP_CBAJ_G0000399.1 mouse_genomes_project 1 66178357 66181093 + TEC TEC MGP_CBAJ_T0000685.1 MGP_CBAJ_G0000625.1 mouse_genomes_project 1 177865714 177869283 + TEC TEC MGP_CBAJ_T0099749.1 MGP_CBAJ_G0038004.1 mouse_genomes_project 1 41003872 41004087 + Gm24826 snoRNA snoRNA MGP_CBAJ_T0012026.1 MGP_CBAJ_G0010138.1 mouse_genomes_project 1 110110701 110111058 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011862.1 MGP_CBAJ_G0009974.1 mouse_genomes_project 1 46556641 46556950 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101483.1 MGP_CBAJ_G0039515.1 mouse_genomes_project 1 129232025 129233908 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0023197.1 MGP_CBAJ_G0016503.1 mouse_genomes_project 1 189717500 189718767 + MGP_CBAJ_P0023197 Alyref2 protein_coding protein_coding MGP_CBAJ_T0098176.1 MGP_CBAJ_G0036449.1 mouse_genomes_project 1 140003760 140003889 + Gm23370 scaRNA scaRNA MGP_CBAJ_T0021278.1 MGP_CBAJ_G0016105.1 mouse_genomes_project 1 115272368 115364863 - MGP_CBAJ_P0021278 Rnf152 protein_coding protein_coding MGP_CBAJ_T0021279.1 MGP_CBAJ_G0016105.1 mouse_genomes_project 1 115272371 115364901 - MGP_CBAJ_P0021279 Rnf152 protein_coding protein_coding MGP_CBAJ_T0020284.1 MGP_CBAJ_G0015901.1 mouse_genomes_project 1 80746872 80797922 + MGP_CBAJ_P0020284 Ttll4 protein_coding protein_coding MGP_CBAJ_T0020285.1 MGP_CBAJ_G0015901.1 mouse_genomes_project 1 80746877 80773906 + MGP_CBAJ_P0020285 Ttll4 protein_coding protein_coding MGP_CBAJ_T0020286.1 MGP_CBAJ_G0015901.1 mouse_genomes_project 1 80746944 80758385 + Ttll4 protein_coding retained_intron MGP_CBAJ_T0020287.1 MGP_CBAJ_G0015901.1 mouse_genomes_project 1 80746944 80770580 + MGP_CBAJ_P0020287 Ttll4 protein_coding protein_coding MGP_CBAJ_T0020288.1 MGP_CBAJ_G0015901.1 mouse_genomes_project 1 80767686 80792168 + MGP_CBAJ_P0020288 Ttll4 protein_coding protein_coding MGP_CBAJ_T0020289.1 MGP_CBAJ_G0015901.1 mouse_genomes_project 1 80773874 80777177 + Ttll4 protein_coding processed_transcript MGP_CBAJ_T0020290.1 MGP_CBAJ_G0015901.1 mouse_genomes_project 1 80774504 80777199 + Ttll4 protein_coding processed_transcript MGP_CBAJ_T0020291.1 MGP_CBAJ_G0015901.1 mouse_genomes_project 1 80777971 80779227 + Ttll4 protein_coding retained_intron MGP_CBAJ_T0020292.1 MGP_CBAJ_G0015901.1 mouse_genomes_project 1 80778621 80796023 + Ttll4 protein_coding processed_transcript MGP_CBAJ_T0020293.1 MGP_CBAJ_G0015901.1 mouse_genomes_project 1 80789403 80794069 + Ttll4 protein_coding retained_intron MGP_CBAJ_T0020294.1 MGP_CBAJ_G0015901.1 mouse_genomes_project 1 80789924 80792032 + Ttll4 protein_coding processed_transcript MGP_CBAJ_T0000690.1 MGP_CBAJ_G0000630.1 mouse_genomes_project 1 180364138 180366121 + TEC TEC MGP_CBAJ_T0019917.1 MGP_CBAJ_G0015828.1 mouse_genomes_project 1 67855071 67859631 + MGP_CBAJ_P0019917 Eef1b2 protein_coding protein_coding MGP_CBAJ_T0019918.1 MGP_CBAJ_G0015828.1 mouse_genomes_project 1 67855375 67858507 + MGP_CBAJ_P0019918 Eef1b2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019919.1 MGP_CBAJ_G0015828.1 mouse_genomes_project 1 67855376 67858801 + MGP_CBAJ_P0019919 Eef1b2 protein_coding protein_coding MGP_CBAJ_T0019920.1 MGP_CBAJ_G0015828.1 mouse_genomes_project 1 67855377 67856756 + Eef1b2 protein_coding processed_transcript MGP_CBAJ_T0019921.1 MGP_CBAJ_G0015828.1 mouse_genomes_project 1 67855391 67858767 + MGP_CBAJ_P0019921 Eef1b2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019922.1 MGP_CBAJ_G0015828.1 mouse_genomes_project 1 67855391 67858713 + MGP_CBAJ_P0019922 Eef1b2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019923.1 MGP_CBAJ_G0015828.1 mouse_genomes_project 1 67855393 67856670 + Eef1b2 protein_coding processed_transcript MGP_CBAJ_T0019924.1 MGP_CBAJ_G0015828.1 mouse_genomes_project 1 67855431 67857126 + MGP_CBAJ_P0019924 Eef1b2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019925.1 MGP_CBAJ_G0015828.1 mouse_genomes_project 1 67855469 67857145 + MGP_CBAJ_P0019925 Eef1b2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0005697.1 MGP_CBAJ_G0004774.1 mouse_genomes_project 1 79202172 79240276 + Gm29185 lincRNA lincRNA MGP_CBAJ_T0000529.1 MGP_CBAJ_G0000471.1 mouse_genomes_project 1 98625416 98628206 + TEC TEC MGP_CBAJ_T0000541.1 MGP_CBAJ_G0000483.1 mouse_genomes_project 1 107003010 107004694 - TEC TEC MGP_CBAJ_T0012209.1 MGP_CBAJ_G0010321.1 mouse_genomes_project 1 201192032 201192325 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0020586.1 MGP_CBAJ_G0015953.1 mouse_genomes_project 1 87183171 87480618 - MGP_CBAJ_P0020586 Dock10 protein_coding protein_coding MGP_CBAJ_T0020587.1 MGP_CBAJ_G0015953.1 mouse_genomes_project 1 87183286 87287977 - MGP_CBAJ_P0020587 Dock10 protein_coding protein_coding MGP_CBAJ_T0020588.1 MGP_CBAJ_G0015953.1 mouse_genomes_project 1 87183651 87378035 - MGP_CBAJ_P0020588 Dock10 protein_coding protein_coding MGP_CBAJ_T0020589.1 MGP_CBAJ_G0015953.1 mouse_genomes_project 1 87183739 87214553 - MGP_CBAJ_P0020589 Dock10 protein_coding protein_coding MGP_CBAJ_T0020590.1 MGP_CBAJ_G0015953.1 mouse_genomes_project 1 87183811 87378001 - MGP_CBAJ_P0020590 Dock10 protein_coding protein_coding MGP_CBAJ_T0020591.1 MGP_CBAJ_G0015953.1 mouse_genomes_project 1 87184989 87188418 - Dock10 protein_coding retained_intron MGP_CBAJ_T0020592.1 MGP_CBAJ_G0015953.1 mouse_genomes_project 1 87205225 87207108 - Dock10 protein_coding retained_intron MGP_CBAJ_T0020593.1 MGP_CBAJ_G0015953.1 mouse_genomes_project 1 87275329 87480697 - Dock10 protein_coding retained_intron MGP_CBAJ_T0020594.1 MGP_CBAJ_G0015953.1 mouse_genomes_project 1 87280774 87418167 - MGP_CBAJ_P0020594 Dock10 protein_coding protein_coding MGP_CBAJ_T0020595.1 MGP_CBAJ_G0015953.1 mouse_genomes_project 1 87287744 87378018 - MGP_CBAJ_P0020595 Dock10 protein_coding protein_coding MGP_CBAJ_T0020596.1 MGP_CBAJ_G0015953.1 mouse_genomes_project 1 87351726 87480657 - Dock10 protein_coding retained_intron MGP_CBAJ_T0011919.1 MGP_CBAJ_G0010031.1 mouse_genomes_project 1 63935592 63935977 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0020800.1 MGP_CBAJ_G0016002.1 mouse_genomes_project 1 94750401 94754041 + MGP_CBAJ_P0020800 Chrng protein_coding protein_coding MGP_CBAJ_T0020801.1 MGP_CBAJ_G0016002.1 mouse_genomes_project 1 94751554 94754040 + MGP_CBAJ_P0020801 Chrng protein_coding protein_coding MGP_CBAJ_T0020802.1 MGP_CBAJ_G0016002.1 mouse_genomes_project 1 94751555 94758412 + MGP_CBAJ_P0020802 Chrng protein_coding protein_coding MGP_CBAJ_T0020803.1 MGP_CBAJ_G0016002.1 mouse_genomes_project 1 94751629 94754040 + MGP_CBAJ_P0020803 Chrng protein_coding protein_coding MGP_CBAJ_T0020804.1 MGP_CBAJ_G0016002.1 mouse_genomes_project 1 94751818 94754340 + Chrng protein_coding retained_intron MGP_CBAJ_T0005571.1 MGP_CBAJ_G0004683.1 mouse_genomes_project 1 18026590 18027631 + Gm28340 lincRNA lincRNA MGP_CBAJ_T0000609.1 MGP_CBAJ_G0000550.1 mouse_genomes_project 1 149905934 149908187 + TEC TEC MGP_CBAJ_T0009424.1 MGP_CBAJ_G0007562.1 mouse_genomes_project 1 176125075 176125141 + Mir1843b miRNA miRNA MGP_CBAJ_T0002898.1 MGP_CBAJ_G0002723.1 mouse_genomes_project 1 200483783 200487039 + H3f3aos antisense antisense MGP_CBAJ_T0002899.1 MGP_CBAJ_G0002723.1 mouse_genomes_project 1 200483791 200486868 + H3f3aos antisense antisense MGP_CBAJ_T0005635.1 MGP_CBAJ_G0004728.1 mouse_genomes_project 1 53331386 53331914 - Gm29665 lincRNA lincRNA MGP_CBAJ_T0000656.1 MGP_CBAJ_G0000596.1 mouse_genomes_project 1 172294716 172295925 + TEC TEC MGP_CBAJ_T0002820.1 MGP_CBAJ_G0002661.1 mouse_genomes_project 1 146456196 146477040 - Gm28609 antisense antisense MGP_CBAJ_T0097866.1 MGP_CBAJ_G0036139.1 mouse_genomes_project 1 38158577 38158696 + n-R5s210 rRNA rRNA MGP_CBAJ_T0005909.1 MGP_CBAJ_G0004946.1 mouse_genomes_project 1 195435638 195555162 - lincRNA lincRNA MGP_CBAJ_T0019649.1 MGP_CBAJ_G0015785.1 mouse_genomes_project 1 61900892 61915876 - MGP_CBAJ_P0019649 Kctd18 protein_coding protein_coding MGP_CBAJ_T0019650.1 MGP_CBAJ_G0015785.1 mouse_genomes_project 1 61901039 61915920 - MGP_CBAJ_P0019650 Kctd18 protein_coding protein_coding MGP_CBAJ_T0019651.1 MGP_CBAJ_G0015785.1 mouse_genomes_project 1 61901044 61915316 - MGP_CBAJ_P0019651 Kctd18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019652.1 MGP_CBAJ_G0015785.1 mouse_genomes_project 1 61901863 61968423 - MGP_CBAJ_P0019652 Kctd18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019653.1 MGP_CBAJ_G0015785.1 mouse_genomes_project 1 61902119 61915355 - MGP_CBAJ_P0019653 Kctd18 protein_coding unknown_likely_coding MGP_CBAJ_T0019654.1 MGP_CBAJ_G0015785.1 mouse_genomes_project 1 61902371 61915840 - MGP_CBAJ_P0019654 Kctd18 protein_coding protein_coding MGP_CBAJ_T0019655.1 MGP_CBAJ_G0015785.1 mouse_genomes_project 1 61902483 61909239 - Kctd18 protein_coding retained_intron MGP_CBAJ_T0019656.1 MGP_CBAJ_G0015785.1 mouse_genomes_project 1 61902511 61907894 - Kctd18 protein_coding retained_intron MGP_CBAJ_T0019657.1 MGP_CBAJ_G0015785.1 mouse_genomes_project 1 61905845 61915844 - Kctd18 protein_coding retained_intron MGP_CBAJ_T0019658.1 MGP_CBAJ_G0015785.1 mouse_genomes_project 1 61906949 61908773 - Kctd18 protein_coding retained_intron MGP_CBAJ_T0019659.1 MGP_CBAJ_G0015785.1 mouse_genomes_project 1 61909357 61915871 - Kctd18 protein_coding retained_intron MGP_CBAJ_T0019660.1 MGP_CBAJ_G0015785.1 mouse_genomes_project 1 61909393 61915871 - Kctd18 protein_coding retained_intron MGP_CBAJ_T0002913.1 MGP_CBAJ_G0002736.1 mouse_genomes_project 1 210077917 210079384 + A430027H14Rik antisense antisense MGP_CBAJ_T0002914.1 MGP_CBAJ_G0002736.1 mouse_genomes_project 1 210078470 210079360 + A430027H14Rik antisense antisense MGP_CBAJ_T0000645.1 MGP_CBAJ_G0000585.1 mouse_genomes_project 1 166845061 166847157 + TEC TEC MGP_CBAJ_T0012075.1 MGP_CBAJ_G0010187.1 mouse_genomes_project 1 131647594 131647957 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0018659.1 MGP_CBAJ_G0015585.1 mouse_genomes_project 1 11231318 11247194 - MGP_CBAJ_P0018659 Prdm14 protein_coding protein_coding MGP_CBAJ_T0101476.1 MGP_CBAJ_G0039508.1 mouse_genomes_project 1 113141540 113214938 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0000500.1 MGP_CBAJ_G0000442.1 mouse_genomes_project 1 88327556 88329559 - TEC TEC MGP_CBAJ_T0005931.1 MGP_CBAJ_G0004962.1 mouse_genomes_project 1 203485665 203486048 + Gm37986 lincRNA lincRNA MGP_CBAJ_T0098592.1 MGP_CBAJ_G0036847.1 mouse_genomes_project 1 198077436 198077603 + Gm24405 snRNA snRNA MGP_CBAJ_T0009402.1 MGP_CBAJ_G0007540.1 mouse_genomes_project 1 101774961 101775025 + Mir6902 miRNA miRNA MGP_CBAJ_T0023367.1 MGP_CBAJ_G0016557.1 mouse_genomes_project 1 192869912 192870866 + MGP_CBAJ_P0023367 Olfr430 protein_coding protein_coding MGP_CBAJ_T0097883.1 MGP_CBAJ_G0036156.1 mouse_genomes_project 1 178604133 178604251 - Gm25488 rRNA rRNA MGP_CBAJ_T0020626.1 MGP_CBAJ_G0015961.1 mouse_genomes_project 1 89696172 89708023 - MGP_CBAJ_P0020626 Tm4sf20 protein_coding protein_coding MGP_CBAJ_T0020627.1 MGP_CBAJ_G0015961.1 mouse_genomes_project 1 89696932 89708023 - Tm4sf20 protein_coding processed_transcript MGP_CBAJ_T0021343.1 MGP_CBAJ_G0016122.1 mouse_genomes_project 1 117839587 117857690 + MGP_CBAJ_P0021343 protein_coding protein_coding MGP_CBAJ_T0019279.1 MGP_CBAJ_G0015713.1 mouse_genomes_project 1 42211448 42277284 + MGP_CBAJ_P0019279 Slc9a4 protein_coding protein_coding MGP_CBAJ_T0019280.1 MGP_CBAJ_G0015713.1 mouse_genomes_project 1 42211571 42216792 + Slc9a4 protein_coding processed_transcript MGP_CBAJ_T0019281.1 MGP_CBAJ_G0015713.1 mouse_genomes_project 1 42240470 42242772 + Slc9a4 protein_coding processed_transcript MGP_CBAJ_T0019282.1 MGP_CBAJ_G0015713.1 mouse_genomes_project 1 42275526 42276975 + Slc9a4 protein_coding retained_intron MGP_CBAJ_T0099757.1 MGP_CBAJ_G0038012.1 mouse_genomes_project 1 61316020 61316150 - Gm22371 snoRNA snoRNA MGP_CBAJ_T0019946.1 MGP_CBAJ_G0015834.1 mouse_genomes_project 1 68518697 68552998 + MGP_CBAJ_P0019946 Fastkd2 protein_coding protein_coding MGP_CBAJ_T0019947.1 MGP_CBAJ_G0015834.1 mouse_genomes_project 1 68518724 68530771 + Fastkd2 protein_coding retained_intron MGP_CBAJ_T0019948.1 MGP_CBAJ_G0015834.1 mouse_genomes_project 1 68518726 68550881 + Fastkd2 protein_coding retained_intron MGP_CBAJ_T0019949.1 MGP_CBAJ_G0015834.1 mouse_genomes_project 1 68530637 68546402 + Fastkd2 protein_coding processed_transcript MGP_CBAJ_T0019950.1 MGP_CBAJ_G0015834.1 mouse_genomes_project 1 68546365 68548620 + Fastkd2 protein_coding retained_intron MGP_CBAJ_T0019951.1 MGP_CBAJ_G0015834.1 mouse_genomes_project 1 68549564 68550808 + Fastkd2 protein_coding processed_transcript MGP_CBAJ_T0005685.1 MGP_CBAJ_G0004768.1 mouse_genomes_project 1 77622892 77627880 + Gm8883 lincRNA lincRNA MGP_CBAJ_T0005686.1 MGP_CBAJ_G0004768.1 mouse_genomes_project 1 77622897 77627411 + Gm8883 lincRNA lincRNA MGP_CBAJ_T0005687.1 MGP_CBAJ_G0004768.1 mouse_genomes_project 1 77623182 77624650 + Gm8883 lincRNA lincRNA MGP_CBAJ_T0005688.1 MGP_CBAJ_G0004768.1 mouse_genomes_project 1 77623283 77627263 + Gm8883 lincRNA lincRNA MGP_CBAJ_T0022813.1 MGP_CBAJ_G0016417.1 mouse_genomes_project 1 181332646 181334961 + MGP_CBAJ_P0022813 Mettl18 protein_coding protein_coding MGP_CBAJ_T0022814.1 MGP_CBAJ_G0016417.1 mouse_genomes_project 1 181332646 181334961 + MGP_CBAJ_P0022814 Mettl18 protein_coding protein_coding MGP_CBAJ_T0000688.1 MGP_CBAJ_G0000628.1 mouse_genomes_project 1 178808590 178809713 + TEC TEC MGP_CBAJ_T0018779.1 MGP_CBAJ_G0015615.1 mouse_genomes_project 1 19704850 19711975 - MGP_CBAJ_P0018779 Il17f protein_coding protein_coding MGP_CBAJ_T0018780.1 MGP_CBAJ_G0015615.1 mouse_genomes_project 1 19705383 19707258 - Il17f protein_coding retained_intron MGP_CBAJ_T0018781.1 MGP_CBAJ_G0015615.1 mouse_genomes_project 1 19705487 19718191 - MGP_CBAJ_P0018781 Il17f protein_coding protein_coding MGP_CBAJ_T0018782.1 MGP_CBAJ_G0015615.1 mouse_genomes_project 1 19715180 19718187 - Il17f protein_coding processed_transcript MGP_CBAJ_T0002826.1 MGP_CBAJ_G0002663.1 mouse_genomes_project 1 147455784 147469710 + antisense antisense MGP_CBAJ_T0023830.1 MGP_CBAJ_G0016662.1 mouse_genomes_project 1 209902479 210077988 - MGP_CBAJ_P0023830 Kcnk2 protein_coding protein_coding MGP_CBAJ_T0023831.1 MGP_CBAJ_G0016662.1 mouse_genomes_project 1 209902484 210078679 - MGP_CBAJ_P0023831 Kcnk2 protein_coding protein_coding MGP_CBAJ_T0023832.1 MGP_CBAJ_G0016662.1 mouse_genomes_project 1 209902491 210140803 - MGP_CBAJ_P0023832 Kcnk2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023833.1 MGP_CBAJ_G0016662.1 mouse_genomes_project 1 209904307 210140743 - MGP_CBAJ_P0023833 Kcnk2 protein_coding protein_coding MGP_CBAJ_T0023834.1 MGP_CBAJ_G0016662.1 mouse_genomes_project 1 209904579 209916248 - Kcnk2 protein_coding processed_transcript MGP_CBAJ_T0023835.1 MGP_CBAJ_G0016662.1 mouse_genomes_project 1 209904616 209945138 - Kcnk2 protein_coding processed_transcript MGP_CBAJ_T0023836.1 MGP_CBAJ_G0016662.1 mouse_genomes_project 1 210067670 210081468 - Kcnk2 protein_coding processed_transcript MGP_CBAJ_T0020735.1 MGP_CBAJ_G0015984.1 mouse_genomes_project 1 93482897 93495842 - MGP_CBAJ_P0020735 Htr2b protein_coding protein_coding MGP_CBAJ_T0020736.1 MGP_CBAJ_G0015984.1 mouse_genomes_project 1 93483972 93494544 - MGP_CBAJ_P0020736 Htr2b protein_coding protein_coding MGP_CBAJ_T0005853.1 MGP_CBAJ_G0004902.1 mouse_genomes_project 1 170089100 170091165 + Gm29290 lincRNA lincRNA MGP_CBAJ_T0099825.1 MGP_CBAJ_G0038080.1 mouse_genomes_project 1 205473528 205473660 + Snora36b snoRNA snoRNA MGP_CBAJ_T0005810.1 MGP_CBAJ_G0004865.1 mouse_genomes_project 1 143341036 143352200 - Gm16081 lincRNA lincRNA MGP_CBAJ_T0000333.1 MGP_CBAJ_G0000278.1 mouse_genomes_project 1 4348783 4351651 - TEC TEC MGP_CBAJ_T0002700.1 MGP_CBAJ_G0002569.1 mouse_genomes_project 1 19256739 19294007 + 4930486I03Rik antisense antisense MGP_CBAJ_T0000528.1 MGP_CBAJ_G0000470.1 mouse_genomes_project 1 98305557 98306924 - TEC TEC MGP_CBAJ_T0011843.1 MGP_CBAJ_G0009955.1 mouse_genomes_project 1 35839602 35839831 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000768.1 MGP_CBAJ_G0000705.1 mouse_genomes_project 1 215870746 215872610 + TEC TEC MGP_CBAJ_T0019577.1 MGP_CBAJ_G0015770.1 mouse_genomes_project 1 58565362 58610050 - MGP_CBAJ_P0019577 Sf3b1 protein_coding protein_coding MGP_CBAJ_T0019578.1 MGP_CBAJ_G0015770.1 mouse_genomes_project 1 58565366 58571309 - Sf3b1 protein_coding retained_intron MGP_CBAJ_T0019579.1 MGP_CBAJ_G0015770.1 mouse_genomes_project 1 58569146 58572735 - Sf3b1 protein_coding retained_intron MGP_CBAJ_T0019580.1 MGP_CBAJ_G0015770.1 mouse_genomes_project 1 58583210 58610033 - Sf3b1 protein_coding retained_intron MGP_CBAJ_T0019581.1 MGP_CBAJ_G0015770.1 mouse_genomes_project 1 58587725 58594871 - Sf3b1 protein_coding retained_intron MGP_CBAJ_T0019582.1 MGP_CBAJ_G0015770.1 mouse_genomes_project 1 58591929 58609963 - MGP_CBAJ_P0019582 Sf3b1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019583.1 MGP_CBAJ_G0015770.1 mouse_genomes_project 1 58595478 58609942 - Sf3b1 protein_coding processed_transcript MGP_CBAJ_T0019584.1 MGP_CBAJ_G0015770.1 mouse_genomes_project 1 58595608 58596607 - Sf3b1 protein_coding retained_intron MGP_CBAJ_T0000454.1 MGP_CBAJ_G0000396.1 mouse_genomes_project 1 65329375 65330776 + TEC TEC MGP_CBAJ_T0020613.1 MGP_CBAJ_G0015960.1 mouse_genomes_project 1 89659956 89670533 + Mff protein_coding processed_transcript MGP_CBAJ_T0020614.1 MGP_CBAJ_G0015960.1 mouse_genomes_project 1 89659957 89691880 + MGP_CBAJ_P0020614 Mff protein_coding protein_coding MGP_CBAJ_T0020615.1 MGP_CBAJ_G0015960.1 mouse_genomes_project 1 89659963 89691883 + MGP_CBAJ_P0020615 Mff protein_coding protein_coding MGP_CBAJ_T0020616.1 MGP_CBAJ_G0015960.1 mouse_genomes_project 1 89659972 89671752 + Mff protein_coding retained_intron MGP_CBAJ_T0020617.1 MGP_CBAJ_G0015960.1 mouse_genomes_project 1 89659979 89691893 + MGP_CBAJ_P0020617 Mff protein_coding protein_coding MGP_CBAJ_T0020618.1 MGP_CBAJ_G0015960.1 mouse_genomes_project 1 89664312 89686651 + MGP_CBAJ_P0020618 Mff protein_coding protein_coding MGP_CBAJ_T0020619.1 MGP_CBAJ_G0015960.1 mouse_genomes_project 1 89664366 89676891 + MGP_CBAJ_P0020619 Mff protein_coding protein_coding MGP_CBAJ_T0020620.1 MGP_CBAJ_G0015960.1 mouse_genomes_project 1 89664366 89685590 + MGP_CBAJ_P0020620 Mff protein_coding protein_coding MGP_CBAJ_T0020621.1 MGP_CBAJ_G0015960.1 mouse_genomes_project 1 89670495 89691653 + MGP_CBAJ_P0020621 Mff protein_coding protein_coding MGP_CBAJ_T0020622.1 MGP_CBAJ_G0015960.1 mouse_genomes_project 1 89676645 89686729 + Mff protein_coding retained_intron MGP_CBAJ_T0020623.1 MGP_CBAJ_G0015960.1 mouse_genomes_project 1 89676984 89680906 + Mff protein_coding retained_intron MGP_CBAJ_T0020624.1 MGP_CBAJ_G0015960.1 mouse_genomes_project 1 89681930 89691381 + Mff protein_coding retained_intron MGP_CBAJ_T0020625.1 MGP_CBAJ_G0015960.1 mouse_genomes_project 1 89683396 89686738 + Mff protein_coding retained_intron MGP_CBAJ_T0011944.1 MGP_CBAJ_G0010056.1 mouse_genomes_project 1 68976962 68977427 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000629.1 MGP_CBAJ_G0000569.1 mouse_genomes_project 1 153332328 153334959 + TEC TEC MGP_CBAJ_T0000588.1 MGP_CBAJ_G0000530.1 mouse_genomes_project 1 142949666 142952560 + TEC TEC MGP_CBAJ_T0023593.1 MGP_CBAJ_G0016610.1 mouse_genomes_project 1 200468559 200483640 - MGP_CBAJ_P0023593 H3f3a protein_coding protein_coding MGP_CBAJ_T0023594.1 MGP_CBAJ_G0016610.1 mouse_genomes_project 1 200470419 200483542 - MGP_CBAJ_P0023594 H3f3a protein_coding protein_coding MGP_CBAJ_T0023595.1 MGP_CBAJ_G0016610.1 mouse_genomes_project 1 200470419 200483951 - MGP_CBAJ_P0023595 H3f3a protein_coding protein_coding MGP_CBAJ_T0023596.1 MGP_CBAJ_G0016610.1 mouse_genomes_project 1 200477056 200483611 - H3f3a protein_coding retained_intron MGP_CBAJ_T0023597.1 MGP_CBAJ_G0016610.1 mouse_genomes_project 1 200477486 200483611 - MGP_CBAJ_P0023597 H3f3a protein_coding protein_coding MGP_CBAJ_T0023598.1 MGP_CBAJ_G0016610.1 mouse_genomes_project 1 200477494 200483611 - MGP_CBAJ_P0023598 H3f3a protein_coding protein_coding MGP_CBAJ_T0019541.1 MGP_CBAJ_G0015763.1 mouse_genomes_project 1 57111114 57122754 - protein_coding processed_transcript MGP_CBAJ_T0002817.1 MGP_CBAJ_G0002658.1 mouse_genomes_project 1 145430961 145434258 + Gm29629 antisense antisense MGP_CBAJ_T0101487.1 MGP_CBAJ_G0039519.1 mouse_genomes_project 1 153821110 153888962 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0011769.1 MGP_CBAJ_G0009881.1 mouse_genomes_project 1 14130390 14134106 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000625.1 MGP_CBAJ_G0000565.1 mouse_genomes_project 1 153122197 153126041 - TEC TEC MGP_CBAJ_T0005601.1 MGP_CBAJ_G0004710.1 mouse_genomes_project 1 39448263 39478049 + Gm5099 lincRNA lincRNA MGP_CBAJ_T0021239.1 MGP_CBAJ_G0016098.1 mouse_genomes_project 1 106739645 106758088 - MGP_CBAJ_P0021239 D1Ertd622e protein_coding protein_coding MGP_CBAJ_T0021240.1 MGP_CBAJ_G0016098.1 mouse_genomes_project 1 106739645 106757690 - MGP_CBAJ_P0021240 D1Ertd622e protein_coding protein_coding MGP_CBAJ_T0021241.1 MGP_CBAJ_G0016098.1 mouse_genomes_project 1 106741980 106757690 - MGP_CBAJ_P0021241 D1Ertd622e protein_coding protein_coding MGP_CBAJ_T0002861.1 MGP_CBAJ_G0002693.1 mouse_genomes_project 1 179079565 179144884 + Gm38304 antisense antisense MGP_CBAJ_T0021927.1 MGP_CBAJ_G0016251.1 mouse_genomes_project 1 148144967 148163413 + MGP_CBAJ_P0021927 Rabif protein_coding protein_coding MGP_CBAJ_T0000527.1 MGP_CBAJ_G0000469.1 mouse_genomes_project 1 97858817 97860850 + TEC TEC MGP_CBAJ_T0009387.1 MGP_CBAJ_G0007525.1 mouse_genomes_project 1 81283210 81283326 - Gm27943 miRNA miRNA MGP_CBAJ_T0012166.1 MGP_CBAJ_G0010278.1 mouse_genomes_project 1 176223647 176223857 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005764.1 MGP_CBAJ_G0004830.1 mouse_genomes_project 1 105579857 105659553 - lincRNA lincRNA MGP_CBAJ_T0020904.1 MGP_CBAJ_G0016017.1 mouse_genomes_project 1 95799793 95995698 + MGP_CBAJ_P0020904 Ugt1a8 protein_coding protein_coding MGP_CBAJ_T0000415.1 MGP_CBAJ_G0000357.1 mouse_genomes_project 1 38546444 38546978 - TEC TEC MGP_CBAJ_T0011857.1 MGP_CBAJ_G0009969.1 mouse_genomes_project 1 45955384 45955929 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000347.1 MGP_CBAJ_G0000292.1 mouse_genomes_project 1 11304217 11306474 - TEC TEC MGP_CBAJ_T0009411.1 MGP_CBAJ_G0007549.1 mouse_genomes_project 1 140966046 140966116 + Mir128-1 miRNA miRNA MGP_CBAJ_T0011717.1 MGP_CBAJ_G0009829.1 mouse_genomes_project 1 623459 624385 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0018978.1 MGP_CBAJ_G0015658.1 mouse_genomes_project 1 35695273 35724966 - MGP_CBAJ_P0018978 Fam168b protein_coding protein_coding MGP_CBAJ_T0018979.1 MGP_CBAJ_G0015658.1 mouse_genomes_project 1 35695280 35724981 - MGP_CBAJ_P0018979 Fam168b protein_coding protein_coding MGP_CBAJ_T0018980.1 MGP_CBAJ_G0015658.1 mouse_genomes_project 1 35699287 35724880 - MGP_CBAJ_P0018980 Fam168b protein_coding protein_coding MGP_CBAJ_T0018981.1 MGP_CBAJ_G0015658.1 mouse_genomes_project 1 35699404 35724901 - MGP_CBAJ_P0018981 Fam168b protein_coding nonsense_mediated_decay MGP_CBAJ_T0018982.1 MGP_CBAJ_G0015658.1 mouse_genomes_project 1 35700056 35724950 - MGP_CBAJ_P0018982 Fam168b protein_coding protein_coding MGP_CBAJ_T0018983.1 MGP_CBAJ_G0015658.1 mouse_genomes_project 1 35701659 35724929 - Fam168b protein_coding processed_transcript MGP_CBAJ_T0018984.1 MGP_CBAJ_G0015658.1 mouse_genomes_project 1 35701746 35724920 - MGP_CBAJ_P0018984 Fam168b protein_coding protein_coding MGP_CBAJ_T0018985.1 MGP_CBAJ_G0015658.1 mouse_genomes_project 1 35710738 35724981 - Fam168b protein_coding retained_intron MGP_CBAJ_T0012228.1 MGP_CBAJ_G0010340.1 mouse_genomes_project 1 213034931 213035163 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005572.1 MGP_CBAJ_G0004684.1 mouse_genomes_project 1 19598273 19603521 + Gm28653 lincRNA lincRNA MGP_CBAJ_T0005968.1 MGP_CBAJ_G0004989.1 mouse_genomes_project 1 212197577 212219168 + Gm37168 lincRNA lincRNA MGP_CBAJ_T0011736.1 MGP_CBAJ_G0009848.1 mouse_genomes_project 1 4510112 4510271 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0018869.1 MGP_CBAJ_G0015637.1 mouse_genomes_project 1 28810749 28814896 - MGP_CBAJ_P0018869 Gm597 protein_coding protein_coding MGP_CBAJ_T0002761.1 MGP_CBAJ_G0002616.1 mouse_genomes_project 1 78878965 78930039 + 1700027A15Rik antisense antisense MGP_CBAJ_T0002762.1 MGP_CBAJ_G0002616.1 mouse_genomes_project 1 78918807 78930822 + 1700027A15Rik antisense antisense MGP_CBAJ_T0002763.1 MGP_CBAJ_G0002616.1 mouse_genomes_project 1 78919152 78930813 + 1700027A15Rik antisense antisense MGP_CBAJ_T0002764.1 MGP_CBAJ_G0002616.1 mouse_genomes_project 1 78927868 78930814 + 1700027A15Rik antisense antisense MGP_CBAJ_T0002765.1 MGP_CBAJ_G0002616.1 mouse_genomes_project 1 78929883 78930822 + 1700027A15Rik antisense antisense MGP_CBAJ_T0022826.1 MGP_CBAJ_G0016422.1 mouse_genomes_project 1 181617358 181636500 + MGP_CBAJ_P0022826 Slc19a2 protein_coding protein_coding MGP_CBAJ_T0022827.1 MGP_CBAJ_G0016422.1 mouse_genomes_project 1 181617367 181636484 + MGP_CBAJ_P0022827 Slc19a2 protein_coding protein_coding MGP_CBAJ_T0022828.1 MGP_CBAJ_G0016422.1 mouse_genomes_project 1 181617565 181634633 + MGP_CBAJ_P0022828 Slc19a2 protein_coding protein_coding MGP_CBAJ_T0022829.1 MGP_CBAJ_G0016422.1 mouse_genomes_project 1 181633467 181634566 + Slc19a2 protein_coding retained_intron MGP_CBAJ_T0005841.1 MGP_CBAJ_G0004891.1 mouse_genomes_project 1 153035726 153036402 - 1700019P21Rik lincRNA lincRNA MGP_CBAJ_T0000668.1 MGP_CBAJ_G0000608.1 mouse_genomes_project 1 175041270 175046587 + TEC TEC MGP_CBAJ_T0011742.1 MGP_CBAJ_G0009854.1 mouse_genomes_project 1 5219941 5220227 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0020141.1 MGP_CBAJ_G0015874.1 mouse_genomes_project 1 78229068 78351089 - MGP_CBAJ_P0020141 March4 protein_coding protein_coding MGP_CBAJ_T0012055.1 MGP_CBAJ_G0010167.1 mouse_genomes_project 1 122873105 122877320 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005809.1 MGP_CBAJ_G0004864.1 mouse_genomes_project 1 137915010 137917831 + Gm28706 lincRNA lincRNA MGP_CBAJ_T0000592.1 MGP_CBAJ_G0000534.1 mouse_genomes_project 1 144302304 144308173 - TEC TEC MGP_CBAJ_T0000641.1 MGP_CBAJ_G0000581.1 mouse_genomes_project 1 164983213 164984673 - TEC TEC MGP_CBAJ_T0002777.1 MGP_CBAJ_G0002627.1 mouse_genomes_project 1 93667634 93703951 - Gm16341 antisense antisense MGP_CBAJ_T0000539.1 MGP_CBAJ_G0000481.1 mouse_genomes_project 1 105238642 105240936 + TEC TEC MGP_CBAJ_T0022025.1 MGP_CBAJ_G0016272.1 mouse_genomes_project 1 149655158 149671014 + MGP_CBAJ_P0022025 Tnnt2 protein_coding protein_coding MGP_CBAJ_T0022026.1 MGP_CBAJ_G0016272.1 mouse_genomes_project 1 149655190 149671014 + MGP_CBAJ_P0022026 Tnnt2 protein_coding protein_coding MGP_CBAJ_T0022027.1 MGP_CBAJ_G0016272.1 mouse_genomes_project 1 149655194 149658516 + Tnnt2 protein_coding retained_intron MGP_CBAJ_T0022028.1 MGP_CBAJ_G0016272.1 mouse_genomes_project 1 149655194 149663515 + Tnnt2 protein_coding retained_intron MGP_CBAJ_T0022029.1 MGP_CBAJ_G0016272.1 mouse_genomes_project 1 149655206 149666812 + MGP_CBAJ_P0022029 Tnnt2 protein_coding protein_coding MGP_CBAJ_T0022030.1 MGP_CBAJ_G0016272.1 mouse_genomes_project 1 149655214 149671014 + MGP_CBAJ_P0022030 Tnnt2 protein_coding protein_coding MGP_CBAJ_T0022031.1 MGP_CBAJ_G0016272.1 mouse_genomes_project 1 149655217 149671014 + MGP_CBAJ_P0022031 Tnnt2 protein_coding protein_coding MGP_CBAJ_T0022032.1 MGP_CBAJ_G0016272.1 mouse_genomes_project 1 149659495 149668222 + MGP_CBAJ_P0022032 Tnnt2 protein_coding protein_coding MGP_CBAJ_T0022033.1 MGP_CBAJ_G0016272.1 mouse_genomes_project 1 149659653 149671014 + MGP_CBAJ_P0022033 Tnnt2 protein_coding protein_coding MGP_CBAJ_T0022034.1 MGP_CBAJ_G0016272.1 mouse_genomes_project 1 149659671 149671014 + MGP_CBAJ_P0022034 Tnnt2 protein_coding protein_coding MGP_CBAJ_T0022035.1 MGP_CBAJ_G0016272.1 mouse_genomes_project 1 149659671 149671014 + MGP_CBAJ_P0022035 Tnnt2 protein_coding protein_coding MGP_CBAJ_T0022036.1 MGP_CBAJ_G0016272.1 mouse_genomes_project 1 149659671 149671014 + MGP_CBAJ_P0022036 Tnnt2 protein_coding protein_coding MGP_CBAJ_T0022037.1 MGP_CBAJ_G0016272.1 mouse_genomes_project 1 149659671 149671014 + MGP_CBAJ_P0022037 Tnnt2 protein_coding protein_coding MGP_CBAJ_T0022038.1 MGP_CBAJ_G0016272.1 mouse_genomes_project 1 149659671 149671014 + MGP_CBAJ_P0022038 Tnnt2 protein_coding protein_coding MGP_CBAJ_T0022039.1 MGP_CBAJ_G0016272.1 mouse_genomes_project 1 149668212 149668504 + Tnnt2 protein_coding retained_intron MGP_CBAJ_T0099798.1 MGP_CBAJ_G0038053.1 mouse_genomes_project 1 151339782 151339879 - Gm23534 snoRNA snoRNA MGP_CBAJ_T0000383.1 MGP_CBAJ_G0000326.1 mouse_genomes_project 1 25294057 25299953 - TEC TEC MGP_CBAJ_T0000647.1 MGP_CBAJ_G0000587.1 mouse_genomes_project 1 167316594 167319616 - TEC TEC MGP_CBAJ_T0000576.1 MGP_CBAJ_G0000518.1 mouse_genomes_project 1 139923834 139928632 + TEC TEC MGP_CBAJ_T0011121.1 MGP_CBAJ_G0009259.1 mouse_genomes_project 1 63880821 63880906 + Gm24545 misc_RNA misc_RNA MGP_CBAJ_T0101007.1 MGP_CBAJ_G0039251.1 mouse_genomes_project 1 199933468 199938863 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101008.1 MGP_CBAJ_G0039251.1 mouse_genomes_project 1 199933672 199934751 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0098550.1 MGP_CBAJ_G0036805.1 mouse_genomes_project 1 102301520 102301622 - Gm22089 snRNA snRNA MGP_CBAJ_T0002819.1 MGP_CBAJ_G0002660.1 mouse_genomes_project 1 146092998 146096470 + Gm10538 antisense antisense MGP_CBAJ_T0019073.1 MGP_CBAJ_G0015674.1 mouse_genomes_project 1 37812217 37824072 - MGP_CBAJ_P0019073 Actr1b protein_coding protein_coding MGP_CBAJ_T0019074.1 MGP_CBAJ_G0015674.1 mouse_genomes_project 1 37815316 37815751 - Actr1b protein_coding retained_intron MGP_CBAJ_T0019075.1 MGP_CBAJ_G0015674.1 mouse_genomes_project 1 37815768 37824011 - Actr1b protein_coding retained_intron MGP_CBAJ_T0019076.1 MGP_CBAJ_G0015674.1 mouse_genomes_project 1 37815859 37823742 - MGP_CBAJ_P0019076 Actr1b protein_coding protein_coding MGP_CBAJ_T0019077.1 MGP_CBAJ_G0015674.1 mouse_genomes_project 1 37815880 37831270 - MGP_CBAJ_P0019077 Actr1b protein_coding protein_coding MGP_CBAJ_T0019078.1 MGP_CBAJ_G0015674.1 mouse_genomes_project 1 37816564 37821234 - Actr1b protein_coding retained_intron MGP_CBAJ_T0019079.1 MGP_CBAJ_G0015674.1 mouse_genomes_project 1 37820608 37823983 - Actr1b protein_coding processed_transcript MGP_CBAJ_T0021066.1 MGP_CBAJ_G0016057.1 mouse_genomes_project 1 100730327 100768054 - MGP_CBAJ_P0021066 Ndufa10 protein_coding protein_coding MGP_CBAJ_T0021067.1 MGP_CBAJ_G0016057.1 mouse_genomes_project 1 100730596 100767951 - MGP_CBAJ_P0021067 Ndufa10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021068.1 MGP_CBAJ_G0016057.1 mouse_genomes_project 1 100731158 100752045 - Ndufa10 protein_coding retained_intron MGP_CBAJ_T0021069.1 MGP_CBAJ_G0016057.1 mouse_genomes_project 1 100743367 100754319 - Ndufa10 protein_coding processed_transcript MGP_CBAJ_T0021070.1 MGP_CBAJ_G0016057.1 mouse_genomes_project 1 100753551 100762192 - Ndufa10 protein_coding retained_intron MGP_CBAJ_T0021071.1 MGP_CBAJ_G0016057.1 mouse_genomes_project 1 100754432 100762381 - Ndufa10 protein_coding retained_intron MGP_CBAJ_T0021072.1 MGP_CBAJ_G0016057.1 mouse_genomes_project 1 100758744 100767941 - MGP_CBAJ_P0021072 Ndufa10 protein_coding protein_coding MGP_CBAJ_T0021073.1 MGP_CBAJ_G0016057.1 mouse_genomes_project 1 100766972 100767961 - Ndufa10 protein_coding retained_intron MGP_CBAJ_T0019956.1 MGP_CBAJ_G0015837.1 mouse_genomes_project 1 69393441 69475944 + MGP_CBAJ_P0019956 Creb1 protein_coding protein_coding MGP_CBAJ_T0019957.1 MGP_CBAJ_G0015837.1 mouse_genomes_project 1 69393447 69426521 + Creb1 protein_coding retained_intron MGP_CBAJ_T0019958.1 MGP_CBAJ_G0015837.1 mouse_genomes_project 1 69393452 69449105 + MGP_CBAJ_P0019958 Creb1 protein_coding protein_coding MGP_CBAJ_T0019959.1 MGP_CBAJ_G0015837.1 mouse_genomes_project 1 69393452 69474865 + MGP_CBAJ_P0019959 Creb1 protein_coding protein_coding MGP_CBAJ_T0019960.1 MGP_CBAJ_G0015837.1 mouse_genomes_project 1 69393475 69446002 + Creb1 protein_coding processed_transcript MGP_CBAJ_T0019961.1 MGP_CBAJ_G0015837.1 mouse_genomes_project 1 69393502 69471076 + MGP_CBAJ_P0019961 Creb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019962.1 MGP_CBAJ_G0015837.1 mouse_genomes_project 1 69393537 69471086 + MGP_CBAJ_P0019962 Creb1 protein_coding protein_coding MGP_CBAJ_T0019963.1 MGP_CBAJ_G0015837.1 mouse_genomes_project 1 69428126 69429768 + Creb1 protein_coding retained_intron MGP_CBAJ_T0019964.1 MGP_CBAJ_G0015837.1 mouse_genomes_project 1 69447276 69450038 + Creb1 protein_coding retained_intron MGP_CBAJ_T0005584.1 MGP_CBAJ_G0004695.1 mouse_genomes_project 1 31408206 31489032 - lincRNA lincRNA MGP_CBAJ_T0023733.1 MGP_CBAJ_G0016640.1 mouse_genomes_project 1 203489416 203490031 + Hhipl2 protein_coding processed_transcript MGP_CBAJ_T0023734.1 MGP_CBAJ_G0016640.1 mouse_genomes_project 1 203489663 203511718 + MGP_CBAJ_P0023734 Hhipl2 protein_coding protein_coding MGP_CBAJ_T0023735.1 MGP_CBAJ_G0016640.1 mouse_genomes_project 1 203489760 203494668 + Hhipl2 protein_coding processed_transcript MGP_CBAJ_T0023736.1 MGP_CBAJ_G0016640.1 mouse_genomes_project 1 203489965 203511397 + MGP_CBAJ_P0023736 Hhipl2 protein_coding protein_coding MGP_CBAJ_T0099751.1 MGP_CBAJ_G0038006.1 mouse_genomes_project 1 41072169 41072299 - Gm23722 snoRNA snoRNA MGP_CBAJ_T0000722.1 MGP_CBAJ_G0000662.1 mouse_genomes_project 1 196321252 196322048 - TEC TEC MGP_CBAJ_T0012099.1 MGP_CBAJ_G0010211.1 mouse_genomes_project 1 143240291 143240700 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002812.1 MGP_CBAJ_G0002655.1 mouse_genomes_project 1 144009283 144023306 - Gm15848 antisense antisense MGP_CBAJ_T0002813.1 MGP_CBAJ_G0002655.1 mouse_genomes_project 1 144009509 144019896 - Gm15848 antisense antisense MGP_CBAJ_T0002814.1 MGP_CBAJ_G0002655.1 mouse_genomes_project 1 144016619 144019926 - Gm15848 antisense antisense MGP_CBAJ_T0022702.1 MGP_CBAJ_G0016394.1 mouse_genomes_project 1 178549017 178559652 + MGP_CBAJ_P0022702 Tnfsf18 protein_coding protein_coding MGP_CBAJ_T0012188.1 MGP_CBAJ_G0010300.1 mouse_genomes_project 1 187495195 187495779 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0021642.1 MGP_CBAJ_G0016187.1 mouse_genomes_project 1 144127998 144135405 - MGP_CBAJ_P0021642 Il19 protein_coding protein_coding MGP_CBAJ_T0021643.1 MGP_CBAJ_G0016187.1 mouse_genomes_project 1 144128000 144134553 - MGP_CBAJ_P0021643 Il19 protein_coding protein_coding MGP_CBAJ_T0021644.1 MGP_CBAJ_G0016187.1 mouse_genomes_project 1 144128158 144135419 - MGP_CBAJ_P0021644 Il19 protein_coding protein_coding MGP_CBAJ_T0021645.1 MGP_CBAJ_G0016187.1 mouse_genomes_project 1 144128200 144135377 - MGP_CBAJ_P0021645 Il19 protein_coding protein_coding MGP_CBAJ_T0023738.1 MGP_CBAJ_G0016642.1 mouse_genomes_project 1 204132082 204133354 - 1700056E22Rik protein_coding antisense MGP_CBAJ_T0023739.1 MGP_CBAJ_G0016642.1 mouse_genomes_project 1 204132084 204133051 - MGP_CBAJ_P0023739 1700056E22Rik protein_coding protein_coding MGP_CBAJ_T0012232.1 MGP_CBAJ_G0010344.1 mouse_genomes_project 1 214589357 214589889 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000392.1 MGP_CBAJ_G0000335.1 mouse_genomes_project 1 31183554 31186433 - TEC TEC MGP_CBAJ_T0019609.1 MGP_CBAJ_G0015777.1 mouse_genomes_project 1 58883308 58940084 - MGP_CBAJ_P0019609 Boll protein_coding nonsense_mediated_decay MGP_CBAJ_T0019610.1 MGP_CBAJ_G0015777.1 mouse_genomes_project 1 58908377 59012241 - MGP_CBAJ_P0019610 Boll protein_coding protein_coding MGP_CBAJ_T0019611.1 MGP_CBAJ_G0015777.1 mouse_genomes_project 1 58939974 59014226 - MGP_CBAJ_P0019611 Boll protein_coding protein_coding MGP_CBAJ_T0019612.1 MGP_CBAJ_G0015777.1 mouse_genomes_project 1 58939974 59014819 - MGP_CBAJ_P0019612 Boll protein_coding nonsense_mediated_decay MGP_CBAJ_T0019613.1 MGP_CBAJ_G0015777.1 mouse_genomes_project 1 58939974 59014819 - MGP_CBAJ_P0019613 Boll protein_coding protein_coding MGP_CBAJ_T0019614.1 MGP_CBAJ_G0015777.1 mouse_genomes_project 1 58993018 59014969 - MGP_CBAJ_P0019614 Boll protein_coding protein_coding MGP_CBAJ_T0019615.1 MGP_CBAJ_G0015777.1 mouse_genomes_project 1 58995674 59012241 - Boll protein_coding processed_transcript MGP_CBAJ_T0023722.1 MGP_CBAJ_G0016638.1 mouse_genomes_project 1 203382878 203403533 - MGP_CBAJ_P0023722 protein_coding protein_coding MGP_CBAJ_T0023723.1 MGP_CBAJ_G0016638.1 mouse_genomes_project 1 203382980 203390751 - MGP_CBAJ_P0023723 protein_coding protein_coding MGP_CBAJ_T0023724.1 MGP_CBAJ_G0016638.1 mouse_genomes_project 1 203383493 203427694 - MGP_CBAJ_P0023724 protein_coding unknown_likely_coding MGP_CBAJ_T0023725.1 MGP_CBAJ_G0016638.1 mouse_genomes_project 1 203391735 203395358 - MGP_CBAJ_P0023725 protein_coding protein_coding MGP_CBAJ_T0023726.1 MGP_CBAJ_G0016638.1 mouse_genomes_project 1 203401968 203409345 - protein_coding retained_intron MGP_CBAJ_T0023727.1 MGP_CBAJ_G0016638.1 mouse_genomes_project 1 203402464 203409323 - MGP_CBAJ_P0023727 protein_coding protein_coding MGP_CBAJ_T0023728.1 MGP_CBAJ_G0016638.1 mouse_genomes_project 1 203416654 203427718 - MGP_CBAJ_P0023728 protein_coding protein_coding MGP_CBAJ_T0002733.1 MGP_CBAJ_G0002596.1 mouse_genomes_project 1 54176751 54179686 - Gm28319 antisense antisense MGP_CBAJ_T0012140.1 MGP_CBAJ_G0010252.1 mouse_genomes_project 1 165672522 165674587 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011815.1 MGP_CBAJ_G0009927.1 mouse_genomes_project 1 31123696 31124024 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012110.1 MGP_CBAJ_G0010222.1 mouse_genomes_project 1 150748975 150749512 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023581.1 MGP_CBAJ_G0016607.1 mouse_genomes_project 1 200280081 200343009 + MGP_CBAJ_P0023581 Lin9 protein_coding protein_coding MGP_CBAJ_T0023582.1 MGP_CBAJ_G0016607.1 mouse_genomes_project 1 200280265 200343016 + MGP_CBAJ_P0023582 Lin9 protein_coding protein_coding MGP_CBAJ_T0023583.1 MGP_CBAJ_G0016607.1 mouse_genomes_project 1 200280284 200331360 + Lin9 protein_coding retained_intron MGP_CBAJ_T0023584.1 MGP_CBAJ_G0016607.1 mouse_genomes_project 1 200280286 200288140 + Lin9 protein_coding processed_transcript MGP_CBAJ_T0023585.1 MGP_CBAJ_G0016607.1 mouse_genomes_project 1 200280291 200343009 + MGP_CBAJ_P0023585 Lin9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023586.1 MGP_CBAJ_G0016607.1 mouse_genomes_project 1 200280297 200321686 + Lin9 protein_coding retained_intron MGP_CBAJ_T0023587.1 MGP_CBAJ_G0016607.1 mouse_genomes_project 1 200303552 200320734 + MGP_CBAJ_P0023587 Lin9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023588.1 MGP_CBAJ_G0016607.1 mouse_genomes_project 1 200329187 200341177 + Lin9 protein_coding retained_intron MGP_CBAJ_T0023589.1 MGP_CBAJ_G0016607.1 mouse_genomes_project 1 200330620 200343009 + Lin9 protein_coding retained_intron MGP_CBAJ_T0023480.1 MGP_CBAJ_G0016590.1 mouse_genomes_project 1 197703332 197716786 - MGP_CBAJ_P0023480 Hnrnpu protein_coding protein_coding MGP_CBAJ_T0023481.1 MGP_CBAJ_G0016590.1 mouse_genomes_project 1 197703821 197709309 - Hnrnpu protein_coding retained_intron MGP_CBAJ_T0023482.1 MGP_CBAJ_G0016590.1 mouse_genomes_project 1 197710854 197711915 - Hnrnpu protein_coding retained_intron MGP_CBAJ_T0023483.1 MGP_CBAJ_G0016590.1 mouse_genomes_project 1 197711091 197713535 - Hnrnpu protein_coding processed_transcript MGP_CBAJ_T0023484.1 MGP_CBAJ_G0016590.1 mouse_genomes_project 1 197714630 197715394 - Hnrnpu protein_coding retained_intron MGP_CBAJ_T0000631.1 MGP_CBAJ_G0000571.1 mouse_genomes_project 1 155737152 155737710 + TEC TEC MGP_CBAJ_T0000636.1 MGP_CBAJ_G0000576.1 mouse_genomes_project 1 161572834 161577285 - TEC TEC MGP_CBAJ_T0020941.1 MGP_CBAJ_G0016034.1 mouse_genomes_project 1 98005548 98074923 - MGP_CBAJ_P0020941 Asb18 protein_coding protein_coding MGP_CBAJ_T0020942.1 MGP_CBAJ_G0016034.1 mouse_genomes_project 1 98007688 98074891 - MGP_CBAJ_P0020942 Asb18 protein_coding protein_coding MGP_CBAJ_T0020943.1 MGP_CBAJ_G0016034.1 mouse_genomes_project 1 98007775 98074802 - MGP_CBAJ_P0020943 Asb18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020944.1 MGP_CBAJ_G0016034.1 mouse_genomes_project 1 98007776 98074802 - MGP_CBAJ_P0020944 Asb18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0098548.1 MGP_CBAJ_G0036803.1 mouse_genomes_project 1 95005114 95005209 - Gm23504 snRNA snRNA MGP_CBAJ_T0000748.1 MGP_CBAJ_G0000686.1 mouse_genomes_project 1 206722857 206723968 + TEC TEC MGP_CBAJ_T0022532.1 MGP_CBAJ_G0016368.1 mouse_genomes_project 1 173098360 173147835 - MGP_CBAJ_P0022532 Fam20b protein_coding protein_coding MGP_CBAJ_T0022533.1 MGP_CBAJ_G0016368.1 mouse_genomes_project 1 173098399 173147849 - MGP_CBAJ_P0022533 Fam20b protein_coding protein_coding MGP_CBAJ_T0022534.1 MGP_CBAJ_G0016368.1 mouse_genomes_project 1 173112981 173127784 - Fam20b protein_coding retained_intron MGP_CBAJ_T0022535.1 MGP_CBAJ_G0016368.1 mouse_genomes_project 1 173127629 173132735 - Fam20b protein_coding processed_transcript MGP_CBAJ_T0022536.1 MGP_CBAJ_G0016368.1 mouse_genomes_project 1 173130566 173145721 - Fam20b protein_coding retained_intron MGP_CBAJ_T0022567.1 MGP_CBAJ_G0016373.1 mouse_genomes_project 1 174008600 174046770 + MGP_CBAJ_P0022567 BC026585 protein_coding protein_coding MGP_CBAJ_T0022568.1 MGP_CBAJ_G0016373.1 mouse_genomes_project 1 174008619 174046653 + MGP_CBAJ_P0022568 BC026585 protein_coding unknown_likely_coding MGP_CBAJ_T0022569.1 MGP_CBAJ_G0016373.1 mouse_genomes_project 1 174015886 174024614 + MGP_CBAJ_P0022569 BC026585 protein_coding protein_coding MGP_CBAJ_T0022570.1 MGP_CBAJ_G0016373.1 mouse_genomes_project 1 174026195 174053483 + MGP_CBAJ_P0022570 BC026585 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023459.1 MGP_CBAJ_G0016583.1 mouse_genomes_project 1 196554081 196557962 + MGP_CBAJ_P0023459 protein_coding protein_coding MGP_CBAJ_T0023460.1 MGP_CBAJ_G0016583.1 mouse_genomes_project 1 196554089 196558011 + MGP_CBAJ_P0023460 protein_coding protein_coding MGP_CBAJ_T0023461.1 MGP_CBAJ_G0016583.1 mouse_genomes_project 1 196555514 196558654 + MGP_CBAJ_P0023461 protein_coding protein_coding MGP_CBAJ_T0023462.1 MGP_CBAJ_G0016583.1 mouse_genomes_project 1 196555526 196558452 + MGP_CBAJ_P0023462 protein_coding protein_coding MGP_CBAJ_T0023463.1 MGP_CBAJ_G0016583.1 mouse_genomes_project 1 196555602 196558384 + MGP_CBAJ_P0023463 protein_coding protein_coding MGP_CBAJ_T0023464.1 MGP_CBAJ_G0016583.1 mouse_genomes_project 1 196556496 196557371 + protein_coding processed_transcript MGP_CBAJ_T0011820.1 MGP_CBAJ_G0009932.1 mouse_genomes_project 1 31724945 31725587 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002797.1 MGP_CBAJ_G0002645.1 mouse_genomes_project 1 115364199 115371701 + Gm17634 antisense antisense MGP_CBAJ_T0002798.1 MGP_CBAJ_G0002645.1 mouse_genomes_project 1 115364953 115371843 + Gm17634 antisense antisense MGP_CBAJ_T0002799.1 MGP_CBAJ_G0002645.1 mouse_genomes_project 1 115365339 115365703 + Gm17634 antisense antisense MGP_CBAJ_T0023499.1 MGP_CBAJ_G0016595.1 mouse_genomes_project 1 199065642 199073607 - MGP_CBAJ_P0023499 protein_coding protein_coding MGP_CBAJ_T0000468.1 MGP_CBAJ_G0000410.1 mouse_genomes_project 1 71880275 71884869 + TEC TEC MGP_CBAJ_T0021086.1 MGP_CBAJ_G0016065.1 mouse_genomes_project 1 100995572 101000196 - MGP_CBAJ_P0021086 Otos protein_coding protein_coding MGP_CBAJ_T0021087.1 MGP_CBAJ_G0016065.1 mouse_genomes_project 1 100995573 100999609 - Otos protein_coding retained_intron MGP_CBAJ_T0020266.1 MGP_CBAJ_G0015899.1 mouse_genomes_project 1 80662137 80673879 - MGP_CBAJ_P0020266 Rnf25 protein_coding protein_coding MGP_CBAJ_T0020267.1 MGP_CBAJ_G0015899.1 mouse_genomes_project 1 80662137 80673854 - MGP_CBAJ_P0020267 Rnf25 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020268.1 MGP_CBAJ_G0015899.1 mouse_genomes_project 1 80662142 80673859 - MGP_CBAJ_P0020268 Rnf25 protein_coding protein_coding MGP_CBAJ_T0020269.1 MGP_CBAJ_G0015899.1 mouse_genomes_project 1 80662611 80663191 - Rnf25 protein_coding retained_intron MGP_CBAJ_T0020270.1 MGP_CBAJ_G0015899.1 mouse_genomes_project 1 80663598 80673046 - MGP_CBAJ_P0020270 Rnf25 protein_coding protein_coding MGP_CBAJ_T0020271.1 MGP_CBAJ_G0015899.1 mouse_genomes_project 1 80664274 80673081 - MGP_CBAJ_P0020271 Rnf25 protein_coding protein_coding MGP_CBAJ_T0020272.1 MGP_CBAJ_G0015899.1 mouse_genomes_project 1 80668270 80673827 - MGP_CBAJ_P0020272 Rnf25 protein_coding protein_coding MGP_CBAJ_T0020273.1 MGP_CBAJ_G0015899.1 mouse_genomes_project 1 80668457 80673876 - Rnf25 protein_coding retained_intron MGP_CBAJ_T0020274.1 MGP_CBAJ_G0015899.1 mouse_genomes_project 1 80668640 80673847 - MGP_CBAJ_P0020274 Rnf25 protein_coding protein_coding MGP_CBAJ_T0021450.1 MGP_CBAJ_G0016144.1 mouse_genomes_project 1 131945961 131955517 - MGP_CBAJ_P0021450 Tmem37 protein_coding protein_coding MGP_CBAJ_T0002709.1 MGP_CBAJ_G0002577.1 mouse_genomes_project 1 37603395 37604099 - Gm38033 antisense antisense MGP_CBAJ_T0011755.1 MGP_CBAJ_G0009867.1 mouse_genomes_project 1 7215958 7218143 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0022221.1 MGP_CBAJ_G0016312.1 mouse_genomes_project 1 161594142 162070308 + MGP_CBAJ_P0022221 Brinp3 protein_coding protein_coding MGP_CBAJ_T0022222.1 MGP_CBAJ_G0016312.1 mouse_genomes_project 1 161596996 161898204 + MGP_CBAJ_P0022222 Brinp3 protein_coding protein_coding MGP_CBAJ_T0022223.1 MGP_CBAJ_G0016312.1 mouse_genomes_project 1 161597069 162070309 + MGP_CBAJ_P0022223 Brinp3 protein_coding protein_coding MGP_CBAJ_T0022224.1 MGP_CBAJ_G0016312.1 mouse_genomes_project 1 161597086 162070303 + MGP_CBAJ_P0022224 Brinp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022225.1 MGP_CBAJ_G0016312.1 mouse_genomes_project 1 161597120 161621575 + Brinp3 protein_coding retained_intron MGP_CBAJ_T0021232.1 MGP_CBAJ_G0016095.1 mouse_genomes_project 1 104394735 104482956 - MGP_CBAJ_P0021232 St8sia4 protein_coding protein_coding MGP_CBAJ_T0021233.1 MGP_CBAJ_G0016095.1 mouse_genomes_project 1 104432807 104482920 - MGP_CBAJ_P0021233 St8sia4 protein_coding protein_coding MGP_CBAJ_T0021234.1 MGP_CBAJ_G0016095.1 mouse_genomes_project 1 104473664 104482953 - St8sia4 protein_coding retained_intron MGP_CBAJ_T0021235.1 MGP_CBAJ_G0016095.1 mouse_genomes_project 1 104479304 104482950 - St8sia4 protein_coding retained_intron MGP_CBAJ_T0009395.1 MGP_CBAJ_G0007533.1 mouse_genomes_project 1 93100915 93100993 + Gm25472 miRNA miRNA MGP_CBAJ_T0005742.1 MGP_CBAJ_G0004809.1 mouse_genomes_project 1 97343922 97399118 - C030007H22Rik lincRNA lincRNA MGP_CBAJ_T0011128.1 MGP_CBAJ_G0009266.1 mouse_genomes_project 1 107065060 107065372 + Gm25413 misc_RNA misc_RNA MGP_CBAJ_T0012210.1 MGP_CBAJ_G0010322.1 mouse_genomes_project 1 201975973 201976390 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0020427.1 MGP_CBAJ_G0015925.1 mouse_genomes_project 1 81348560 81354777 - MGP_CBAJ_P0020427 Resp18 protein_coding protein_coding MGP_CBAJ_T0020428.1 MGP_CBAJ_G0015925.1 mouse_genomes_project 1 81348562 81350627 - Resp18 protein_coding retained_intron MGP_CBAJ_T0020429.1 MGP_CBAJ_G0015925.1 mouse_genomes_project 1 81348672 81354678 - MGP_CBAJ_P0020429 Resp18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020430.1 MGP_CBAJ_G0015925.1 mouse_genomes_project 1 81350433 81354646 - Resp18 protein_coding retained_intron MGP_CBAJ_T0009357.1 MGP_CBAJ_G0007495.1 mouse_genomes_project 1 29609567 29609692 + Mir6342 miRNA miRNA MGP_CBAJ_T0011784.1 MGP_CBAJ_G0009896.1 mouse_genomes_project 1 18132749 18134993 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0020739.1 MGP_CBAJ_G0015985.1 mouse_genomes_project 1 93517610 93547769 + MGP_CBAJ_P0020739 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022391.1 MGP_CBAJ_G0016342.1 mouse_genomes_project 1 169838501 169857559 + MGP_CBAJ_P0022391 Rnasel protein_coding protein_coding MGP_CBAJ_T0022392.1 MGP_CBAJ_G0016342.1 mouse_genomes_project 1 169842963 169858880 + MGP_CBAJ_P0022392 Rnasel protein_coding protein_coding MGP_CBAJ_T0022393.1 MGP_CBAJ_G0016342.1 mouse_genomes_project 1 169842971 169857559 + MGP_CBAJ_P0022393 Rnasel protein_coding protein_coding MGP_CBAJ_T0022394.1 MGP_CBAJ_G0016342.1 mouse_genomes_project 1 169842987 169857404 + Rnasel protein_coding retained_intron MGP_CBAJ_T0022395.1 MGP_CBAJ_G0016342.1 mouse_genomes_project 1 169850045 169857404 + Rnasel protein_coding processed_transcript MGP_CBAJ_T0020478.1 MGP_CBAJ_G0015931.1 mouse_genomes_project 1 81584055 81588762 - MGP_CBAJ_P0020478 Chpf protein_coding protein_coding MGP_CBAJ_T0020479.1 MGP_CBAJ_G0015931.1 mouse_genomes_project 1 81584061 81588798 - MGP_CBAJ_P0020479 Chpf protein_coding protein_coding MGP_CBAJ_T0020480.1 MGP_CBAJ_G0015931.1 mouse_genomes_project 1 81584062 81588233 - Chpf protein_coding retained_intron MGP_CBAJ_T0020481.1 MGP_CBAJ_G0015931.1 mouse_genomes_project 1 81584062 81588610 - MGP_CBAJ_P0020481 Chpf protein_coding nonsense_mediated_decay MGP_CBAJ_T0020482.1 MGP_CBAJ_G0015931.1 mouse_genomes_project 1 81586996 81588605 - MGP_CBAJ_P0020482 Chpf protein_coding nonsense_mediated_decay MGP_CBAJ_T0012053.1 MGP_CBAJ_G0010165.1 mouse_genomes_project 1 122608062 122612176 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000364.1 MGP_CBAJ_G0000309.1 mouse_genomes_project 1 18922836 18928071 - TEC TEC MGP_CBAJ_T0000613.1 MGP_CBAJ_G0000554.1 mouse_genomes_project 1 151848404 151848699 + TEC TEC MGP_CBAJ_T0000390.1 MGP_CBAJ_G0000333.1 mouse_genomes_project 1 25418054 25419276 + TEC TEC MGP_CBAJ_T0022446.1 MGP_CBAJ_G0016354.1 mouse_genomes_project 1 171542910 171695970 - MGP_CBAJ_P0022446 Xpr1 protein_coding protein_coding MGP_CBAJ_T0022447.1 MGP_CBAJ_G0016354.1 mouse_genomes_project 1 171546191 171696048 - MGP_CBAJ_P0022447 Xpr1 protein_coding protein_coding MGP_CBAJ_T0022448.1 MGP_CBAJ_G0016354.1 mouse_genomes_project 1 171549392 171581763 - Xpr1 protein_coding retained_intron MGP_CBAJ_T0022449.1 MGP_CBAJ_G0016354.1 mouse_genomes_project 1 171549877 171696056 - MGP_CBAJ_P0022449 Xpr1 protein_coding protein_coding MGP_CBAJ_T0022450.1 MGP_CBAJ_G0016354.1 mouse_genomes_project 1 171557087 171559876 - Xpr1 protein_coding retained_intron MGP_CBAJ_T0022451.1 MGP_CBAJ_G0016354.1 mouse_genomes_project 1 171594326 171696036 - Xpr1 protein_coding retained_intron MGP_CBAJ_T0022452.1 MGP_CBAJ_G0016354.1 mouse_genomes_project 1 171656513 171659584 - Xpr1 protein_coding processed_transcript MGP_CBAJ_T0005962.1 MGP_CBAJ_G0004984.1 mouse_genomes_project 1 211245138 211270393 - Gm30725 lincRNA lincRNA MGP_CBAJ_T0000610.1 MGP_CBAJ_G0000551.1 mouse_genomes_project 1 151242654 151244570 + TEC TEC MGP_CBAJ_T0016753.1 MGP_CBAJ_G0014843.1 mouse_genomes_project 1 93780502 93788893 + C130036L24Rik processed_transcript retained_intron MGP_CBAJ_T0016754.1 MGP_CBAJ_G0014843.1 mouse_genomes_project 1 93780512 93794716 + C130036L24Rik processed_transcript processed_transcript MGP_CBAJ_T0016755.1 MGP_CBAJ_G0014843.1 mouse_genomes_project 1 93780516 93783701 + C130036L24Rik processed_transcript retained_intron MGP_CBAJ_T0002933.1 MGP_CBAJ_G0002748.1 mouse_genomes_project 1 213927268 213928592 + Gm15867 antisense antisense MGP_CBAJ_T0000605.1 MGP_CBAJ_G0000546.1 mouse_genomes_project 1 148500049 148507659 - TEC TEC MGP_CBAJ_T0023475.1 MGP_CBAJ_G0016588.1 mouse_genomes_project 1 197698119 197701325 + Cox20 protein_coding retained_intron MGP_CBAJ_T0023476.1 MGP_CBAJ_G0016588.1 mouse_genomes_project 1 197698119 197701683 + MGP_CBAJ_P0023476 Cox20 protein_coding protein_coding MGP_CBAJ_T0024036.1 MGP_CBAJ_G0016700.1 mouse_genomes_project 1 215835684 215838346 + Plxna2 protein_coding retained_intron MGP_CBAJ_T0024037.1 MGP_CBAJ_G0016700.1 mouse_genomes_project 1 215837303 216049752 + MGP_CBAJ_P0024037 Plxna2 protein_coding protein_coding MGP_CBAJ_T0024038.1 MGP_CBAJ_G0016700.1 mouse_genomes_project 1 215865286 215880103 + Plxna2 protein_coding processed_transcript MGP_CBAJ_T0024039.1 MGP_CBAJ_G0016700.1 mouse_genomes_project 1 215991332 216014843 + MGP_CBAJ_P0024039 Plxna2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024040.1 MGP_CBAJ_G0016700.1 mouse_genomes_project 1 216035209 216047110 + Plxna2 protein_coding retained_intron MGP_CBAJ_T0012060.1 MGP_CBAJ_G0010172.1 mouse_genomes_project 1 123878948 123880338 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101246.1 MGP_CBAJ_G0039385.1 mouse_genomes_project 1 105920019 106029070 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101247.1 MGP_CBAJ_G0039385.1 mouse_genomes_project 1 105948718 106028730 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101449.1 MGP_CBAJ_G0039481.1 mouse_genomes_project 1 62976220 63065529 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0002875.1 MGP_CBAJ_G0002703.1 mouse_genomes_project 1 183972814 183973469 - Gm15853 antisense antisense MGP_CBAJ_T0098232.1 MGP_CBAJ_G0036505.1 mouse_genomes_project 1 75142264 75144138 - Gm28112 sense_intronic sense_intronic MGP_CBAJ_T0021917.1 MGP_CBAJ_G0016249.1 mouse_genomes_project 1 148064636 148082675 + MGP_CBAJ_P0021917 Adipor1 protein_coding protein_coding MGP_CBAJ_T0021918.1 MGP_CBAJ_G0016249.1 mouse_genomes_project 1 148064714 148082672 + MGP_CBAJ_P0021918 Adipor1 protein_coding protein_coding MGP_CBAJ_T0021919.1 MGP_CBAJ_G0016249.1 mouse_genomes_project 1 148064729 148065199 + Adipor1 protein_coding processed_transcript MGP_CBAJ_T0021920.1 MGP_CBAJ_G0016249.1 mouse_genomes_project 1 148064822 148076172 + Adipor1 protein_coding retained_intron MGP_CBAJ_T0005902.1 MGP_CBAJ_G0004939.1 mouse_genomes_project 1 188143868 188145008 + Gm37748 lincRNA lincRNA MGP_CBAJ_T0011726.1 MGP_CBAJ_G0009838.1 mouse_genomes_project 1 2208020 2208292 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018778.1 MGP_CBAJ_G0015614.1 mouse_genomes_project 1 19655405 19658996 + MGP_CBAJ_P0018778 Il17a protein_coding protein_coding MGP_CBAJ_T0022580.1 MGP_CBAJ_G0016376.1 mouse_genomes_project 1 175027599 175369653 + MGP_CBAJ_P0022580 Astn1 protein_coding protein_coding MGP_CBAJ_T0022581.1 MGP_CBAJ_G0016376.1 mouse_genomes_project 1 175027630 175369655 + MGP_CBAJ_P0022581 Astn1 protein_coding protein_coding MGP_CBAJ_T0022582.1 MGP_CBAJ_G0016376.1 mouse_genomes_project 1 175027665 175293866 + MGP_CBAJ_P0022582 Astn1 protein_coding protein_coding MGP_CBAJ_T0022583.1 MGP_CBAJ_G0016376.1 mouse_genomes_project 1 175027878 175291812 + MGP_CBAJ_P0022583 Astn1 protein_coding protein_coding MGP_CBAJ_T0022584.1 MGP_CBAJ_G0016376.1 mouse_genomes_project 1 175027891 175357432 + MGP_CBAJ_P0022584 Astn1 protein_coding protein_coding MGP_CBAJ_T0022585.1 MGP_CBAJ_G0016376.1 mouse_genomes_project 1 175191326 175202446 + Astn1 protein_coding processed_transcript MGP_CBAJ_T0022586.1 MGP_CBAJ_G0016376.1 mouse_genomes_project 1 175234082 175276950 + MGP_CBAJ_P0022586 Astn1 protein_coding protein_coding MGP_CBAJ_T0022587.1 MGP_CBAJ_G0016376.1 mouse_genomes_project 1 175276700 175290981 + Astn1 protein_coding retained_intron MGP_CBAJ_T0022588.1 MGP_CBAJ_G0016376.1 mouse_genomes_project 1 175333399 175345509 + MGP_CBAJ_P0022588 Astn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022589.1 MGP_CBAJ_G0016376.1 mouse_genomes_project 1 175333547 175362161 + MGP_CBAJ_P0022589 Astn1 protein_coding protein_coding MGP_CBAJ_T0022590.1 MGP_CBAJ_G0016376.1 mouse_genomes_project 1 175356739 175366406 + Astn1 protein_coding processed_transcript MGP_CBAJ_T0000389.1 MGP_CBAJ_G0000332.1 mouse_genomes_project 1 25411879 25412209 - TEC TEC MGP_CBAJ_T0021137.1 MGP_CBAJ_G0016075.1 mouse_genomes_project 1 101555267 101564878 - MGP_CBAJ_P0021137 2310007B03Rik protein_coding protein_coding MGP_CBAJ_T0021138.1 MGP_CBAJ_G0016075.1 mouse_genomes_project 1 101555501 101564800 - MGP_CBAJ_P0021138 2310007B03Rik protein_coding protein_coding MGP_CBAJ_T0005976.1 MGP_CBAJ_G0004996.1 mouse_genomes_project 1 216231984 216238269 - Gm32250 lincRNA lincRNA MGP_CBAJ_T0011971.1 MGP_CBAJ_G0010083.1 mouse_genomes_project 1 81688463 81688955 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021586.1 MGP_CBAJ_G0016171.1 mouse_genomes_project 1 141125027 141156237 - MGP_CBAJ_P0021586 Mcm6 protein_coding protein_coding MGP_CBAJ_T0021587.1 MGP_CBAJ_G0016171.1 mouse_genomes_project 1 141125030 141156220 - MGP_CBAJ_P0021587 Mcm6 protein_coding protein_coding MGP_CBAJ_T0021588.1 MGP_CBAJ_G0016171.1 mouse_genomes_project 1 141133801 141142682 - Mcm6 protein_coding retained_intron MGP_CBAJ_T0021589.1 MGP_CBAJ_G0016171.1 mouse_genomes_project 1 141138010 141140103 - Mcm6 protein_coding retained_intron MGP_CBAJ_T0023354.1 MGP_CBAJ_G0016547.1 mouse_genomes_project 1 192006552 192142422 - MGP_CBAJ_P0023354 Pydc3 protein_coding protein_coding MGP_CBAJ_T0019616.1 MGP_CBAJ_G0015778.1 mouse_genomes_project 1 59069083 59456140 + MGP_CBAJ_P0019616 Plcl1 protein_coding protein_coding MGP_CBAJ_T0019617.1 MGP_CBAJ_G0015778.1 mouse_genomes_project 1 59397635 59434802 + Plcl1 protein_coding processed_transcript MGP_CBAJ_T0000372.1 MGP_CBAJ_G0000315.1 mouse_genomes_project 1 23469651 23472457 + TEC TEC MGP_CBAJ_T0000712.1 MGP_CBAJ_G0000652.1 mouse_genomes_project 1 195172947 195175382 + TEC TEC MGP_CBAJ_T0019603.1 MGP_CBAJ_G0015775.1 mouse_genomes_project 1 58792239 58855865 - MGP_CBAJ_P0019603 Rftn2 protein_coding protein_coding MGP_CBAJ_T0019604.1 MGP_CBAJ_G0015775.1 mouse_genomes_project 1 58793828 58855865 - MGP_CBAJ_P0019604 Rftn2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019605.1 MGP_CBAJ_G0015775.1 mouse_genomes_project 1 58829157 58855865 - MGP_CBAJ_P0019605 Rftn2 protein_coding protein_coding MGP_CBAJ_T0019606.1 MGP_CBAJ_G0015775.1 mouse_genomes_project 1 58831451 58835702 - Rftn2 protein_coding processed_transcript MGP_CBAJ_T0019607.1 MGP_CBAJ_G0015775.1 mouse_genomes_project 1 58853024 58855865 - Rftn2 protein_coding processed_transcript MGP_CBAJ_T0023328.1 MGP_CBAJ_G0016537.1 mouse_genomes_project 1 191578183 191579220 - MGP_CBAJ_P0023328 Olfr1408 protein_coding protein_coding MGP_CBAJ_T0023329.1 MGP_CBAJ_G0016537.1 mouse_genomes_project 1 191578183 191586107 - MGP_CBAJ_P0023329 Olfr1408 protein_coding protein_coding MGP_CBAJ_T0012078.1 MGP_CBAJ_G0010190.1 mouse_genomes_project 1 131848655 131849175 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011774.1 MGP_CBAJ_G0009886.1 mouse_genomes_project 1 15248737 15250597 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098531.1 MGP_CBAJ_G0036786.1 mouse_genomes_project 1 62462309 62462416 - Gm23966 snRNA snRNA MGP_CBAJ_T0009410.1 MGP_CBAJ_G0007548.1 mouse_genomes_project 1 130692128 130692209 + Mir6346 miRNA miRNA MGP_CBAJ_T0098563.1 MGP_CBAJ_G0036818.1 mouse_genomes_project 1 141742298 141742409 - Gm23056 snRNA snRNA MGP_CBAJ_T0005943.1 MGP_CBAJ_G0004969.1 mouse_genomes_project 1 204772318 204791365 - Gm37800 lincRNA lincRNA MGP_CBAJ_T0005944.1 MGP_CBAJ_G0004969.1 mouse_genomes_project 1 204772956 204779893 - Gm37800 lincRNA lincRNA MGP_CBAJ_T0011859.1 MGP_CBAJ_G0009971.1 mouse_genomes_project 1 46087500 46087680 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005556.1 MGP_CBAJ_G0004672.1 mouse_genomes_project 1 1801886 1805009 - Gm37323 lincRNA lincRNA MGP_CBAJ_T0101402.1 MGP_CBAJ_G0039458.1 mouse_genomes_project 1 68704107 68722275 + unitary_pseudogene unitary_pseudogene MGP_CBAJ_T0002757.1 MGP_CBAJ_G0002615.1 mouse_genomes_project 1 77346745 77351356 + Apol7d antisense antisense MGP_CBAJ_T0002758.1 MGP_CBAJ_G0002615.1 mouse_genomes_project 1 77346796 77356007 + Apol7d antisense antisense MGP_CBAJ_T0002759.1 MGP_CBAJ_G0002615.1 mouse_genomes_project 1 77347243 77356797 + Apol7d antisense antisense MGP_CBAJ_T0002760.1 MGP_CBAJ_G0002615.1 mouse_genomes_project 1 77347247 77351144 + Apol7d antisense antisense MGP_CBAJ_T0023177.1 MGP_CBAJ_G0016499.1 mouse_genomes_project 1 189587304 189608573 + Arhgap30 protein_coding retained_intron MGP_CBAJ_T0023178.1 MGP_CBAJ_G0016499.1 mouse_genomes_project 1 189587304 189608515 + Arhgap30 protein_coding retained_intron MGP_CBAJ_T0023179.1 MGP_CBAJ_G0016499.1 mouse_genomes_project 1 189587304 189608515 + MGP_CBAJ_P0023179 Arhgap30 protein_coding protein_coding MGP_CBAJ_T0023180.1 MGP_CBAJ_G0016499.1 mouse_genomes_project 1 189587349 189591165 + Arhgap30 protein_coding retained_intron MGP_CBAJ_T0022979.1 MGP_CBAJ_G0016454.1 mouse_genomes_project 1 185068239 185090148 - MGP_CBAJ_P0022979 Mgst3 protein_coding protein_coding MGP_CBAJ_T0022944.1 MGP_CBAJ_G0016445.1 mouse_genomes_project 1 183972072 183986514 + MGP_CBAJ_P0022944 Tada1 protein_coding protein_coding MGP_CBAJ_T0022945.1 MGP_CBAJ_G0016445.1 mouse_genomes_project 1 183972292 183981822 + Tada1 protein_coding retained_intron MGP_CBAJ_T0022946.1 MGP_CBAJ_G0016445.1 mouse_genomes_project 1 183972299 183977084 + Tada1 protein_coding retained_intron MGP_CBAJ_T0022947.1 MGP_CBAJ_G0016445.1 mouse_genomes_project 1 183972314 183975446 + MGP_CBAJ_P0022947 Tada1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0002790.1 MGP_CBAJ_G0002640.1 mouse_genomes_project 1 101727123 101738461 + Gm28535 antisense antisense MGP_CBAJ_T0011984.1 MGP_CBAJ_G0010096.1 mouse_genomes_project 1 89716582 89716765 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0020532.1 MGP_CBAJ_G0015940.1 mouse_genomes_project 1 84880187 84955652 - MGP_CBAJ_P0020532 Farsb protein_coding protein_coding MGP_CBAJ_T0020533.1 MGP_CBAJ_G0015940.1 mouse_genomes_project 1 84887287 84955690 - MGP_CBAJ_P0020533 Farsb protein_coding protein_coding MGP_CBAJ_T0020534.1 MGP_CBAJ_G0015940.1 mouse_genomes_project 1 84887304 84955655 - MGP_CBAJ_P0020534 Farsb protein_coding nonsense_mediated_decay MGP_CBAJ_T0020535.1 MGP_CBAJ_G0015940.1 mouse_genomes_project 1 84929803 84955652 - MGP_CBAJ_P0020535 Farsb protein_coding protein_coding MGP_CBAJ_T0020536.1 MGP_CBAJ_G0015940.1 mouse_genomes_project 1 84937997 84955588 - Farsb protein_coding processed_transcript MGP_CBAJ_T0020537.1 MGP_CBAJ_G0015940.1 mouse_genomes_project 1 84939381 84955635 - MGP_CBAJ_P0020537 Farsb protein_coding protein_coding MGP_CBAJ_T0020538.1 MGP_CBAJ_G0015940.1 mouse_genomes_project 1 84944666 84955630 - Farsb protein_coding retained_intron MGP_CBAJ_T0012198.1 MGP_CBAJ_G0010310.1 mouse_genomes_project 1 195909857 195910172 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000337.1 MGP_CBAJ_G0000282.1 mouse_genomes_project 1 6882544 6883594 - TEC TEC MGP_CBAJ_T0000533.1 MGP_CBAJ_G0000475.1 mouse_genomes_project 1 100224785 100230345 + TEC TEC MGP_CBAJ_T0009389.1 MGP_CBAJ_G0007527.1 mouse_genomes_project 1 83836003 83836119 - Mir6352 miRNA miRNA MGP_CBAJ_T0012074.1 MGP_CBAJ_G0010186.1 mouse_genomes_project 1 131623332 131624042 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000567.1 MGP_CBAJ_G0000509.1 mouse_genomes_project 1 135749151 135750645 - TEC TEC MGP_CBAJ_T0020476.1 MGP_CBAJ_G0015930.1 mouse_genomes_project 1 81545608 81583827 + MGP_CBAJ_P0020476 Asic4 protein_coding protein_coding MGP_CBAJ_T0020477.1 MGP_CBAJ_G0015930.1 mouse_genomes_project 1 81545871 81583830 + MGP_CBAJ_P0020477 Asic4 protein_coding protein_coding MGP_CBAJ_T0000719.1 MGP_CBAJ_G0000659.1 mouse_genomes_project 1 196150922 196152223 - TEC TEC MGP_CBAJ_T0098591.1 MGP_CBAJ_G0036846.1 mouse_genomes_project 1 197787439 197787545 + Gm24919 snRNA snRNA MGP_CBAJ_T0023377.1 MGP_CBAJ_G0016565.1 mouse_genomes_project 1 193256763 193257693 + MGP_CBAJ_P0023377 Olfr417 protein_coding protein_coding MGP_CBAJ_T0021684.1 MGP_CBAJ_G0016197.1 mouse_genomes_project 1 144894494 144922462 + MGP_CBAJ_P0021684 Ctse protein_coding protein_coding MGP_CBAJ_T0021685.1 MGP_CBAJ_G0016197.1 mouse_genomes_project 1 144894682 144922460 + MGP_CBAJ_P0021685 Ctse protein_coding protein_coding MGP_CBAJ_T0021686.1 MGP_CBAJ_G0016197.1 mouse_genomes_project 1 144908879 144912417 + Ctse protein_coding retained_intron MGP_CBAJ_T0000630.1 MGP_CBAJ_G0000570.1 mouse_genomes_project 1 154559856 154563222 + TEC TEC MGP_CBAJ_T0020923.1 MGP_CBAJ_G0016027.1 mouse_genomes_project 1 96161795 96249713 + MGP_CBAJ_P0020923 Trpm8 protein_coding protein_coding MGP_CBAJ_T0020924.1 MGP_CBAJ_G0016027.1 mouse_genomes_project 1 96165162 96250155 + MGP_CBAJ_P0020924 Trpm8 protein_coding protein_coding MGP_CBAJ_T0020925.1 MGP_CBAJ_G0016027.1 mouse_genomes_project 1 96177959 96249713 + MGP_CBAJ_P0020925 Trpm8 protein_coding protein_coding MGP_CBAJ_T0099792.1 MGP_CBAJ_G0038047.1 mouse_genomes_project 1 135629614 135629745 - Gm24791 snoRNA snoRNA MGP_CBAJ_T0011880.1 MGP_CBAJ_G0009992.1 mouse_genomes_project 1 51207472 51207685 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000418.1 MGP_CBAJ_G0000360.1 mouse_genomes_project 1 38950996 38953283 - TEC TEC MGP_CBAJ_T0018838.1 MGP_CBAJ_G0015631.1 mouse_genomes_project 1 23376064 23453408 - MGP_CBAJ_P0018838 Fam135a protein_coding nonsense_mediated_decay MGP_CBAJ_T0018839.1 MGP_CBAJ_G0015631.1 mouse_genomes_project 1 23376064 23395891 - MGP_CBAJ_P0018839 Fam135a protein_coding protein_coding MGP_CBAJ_T0018840.1 MGP_CBAJ_G0015631.1 mouse_genomes_project 1 23376216 23469229 - MGP_CBAJ_P0018840 Fam135a protein_coding protein_coding MGP_CBAJ_T0018841.1 MGP_CBAJ_G0015631.1 mouse_genomes_project 1 23376562 23469217 - MGP_CBAJ_P0018841 Fam135a protein_coding protein_coding MGP_CBAJ_T0018842.1 MGP_CBAJ_G0015631.1 mouse_genomes_project 1 23376575 23398218 - MGP_CBAJ_P0018842 Fam135a protein_coding nonsense_mediated_decay MGP_CBAJ_T0018843.1 MGP_CBAJ_G0015631.1 mouse_genomes_project 1 23376652 23469368 - MGP_CBAJ_P0018843 Fam135a protein_coding protein_coding MGP_CBAJ_T0018844.1 MGP_CBAJ_G0015631.1 mouse_genomes_project 1 23389220 23397582 - MGP_CBAJ_P0018844 Fam135a protein_coding protein_coding MGP_CBAJ_T0018845.1 MGP_CBAJ_G0015631.1 mouse_genomes_project 1 23397853 23469251 - MGP_CBAJ_P0018845 Fam135a protein_coding protein_coding MGP_CBAJ_T0018846.1 MGP_CBAJ_G0015631.1 mouse_genomes_project 1 23421254 23469376 - Fam135a protein_coding retained_intron MGP_CBAJ_T0019931.1 MGP_CBAJ_G0015831.1 mouse_genomes_project 1 68192271 68344329 + MGP_CBAJ_P0019931 Adam23 protein_coding protein_coding MGP_CBAJ_T0019932.1 MGP_CBAJ_G0015831.1 mouse_genomes_project 1 68192275 68370014 + MGP_CBAJ_P0019932 Adam23 protein_coding protein_coding MGP_CBAJ_T0019933.1 MGP_CBAJ_G0015831.1 mouse_genomes_project 1 68192290 68336378 + Adam23 protein_coding retained_intron MGP_CBAJ_T0019934.1 MGP_CBAJ_G0015831.1 mouse_genomes_project 1 68192315 68294875 + Adam23 protein_coding retained_intron MGP_CBAJ_T0019935.1 MGP_CBAJ_G0015831.1 mouse_genomes_project 1 68192592 68366654 + MGP_CBAJ_P0019935 Adam23 protein_coding protein_coding MGP_CBAJ_T0019936.1 MGP_CBAJ_G0015831.1 mouse_genomes_project 1 68192592 68370014 + MGP_CBAJ_P0019936 Adam23 protein_coding protein_coding MGP_CBAJ_T0019937.1 MGP_CBAJ_G0015831.1 mouse_genomes_project 1 68221608 68309819 + Adam23 protein_coding processed_transcript MGP_CBAJ_T0019938.1 MGP_CBAJ_G0015831.1 mouse_genomes_project 1 68245172 68370014 + Adam23 protein_coding processed_transcript MGP_CBAJ_T0019939.1 MGP_CBAJ_G0015831.1 mouse_genomes_project 1 68299002 68302526 + Adam23 protein_coding retained_intron MGP_CBAJ_T0019940.1 MGP_CBAJ_G0015831.1 mouse_genomes_project 1 68322439 68334194 + Adam23 protein_coding retained_intron MGP_CBAJ_T0019941.1 MGP_CBAJ_G0015831.1 mouse_genomes_project 1 68352532 68355920 + Adam23 protein_coding retained_intron MGP_CBAJ_T0019942.1 MGP_CBAJ_G0015831.1 mouse_genomes_project 1 68358759 68366548 + Adam23 protein_coding retained_intron MGP_CBAJ_T0011724.1 MGP_CBAJ_G0009836.1 mouse_genomes_project 1 1975846 1976477 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000477.1 MGP_CBAJ_G0000419.1 mouse_genomes_project 1 74112744 74115987 - TEC TEC MGP_CBAJ_T0002895.1 MGP_CBAJ_G0002720.1 mouse_genomes_project 1 198366762 198387683 - Gm16564 antisense antisense MGP_CBAJ_T0099801.1 MGP_CBAJ_G0038056.1 mouse_genomes_project 1 158572359 158572494 + Gm25663 snoRNA snoRNA MGP_CBAJ_T0098524.1 MGP_CBAJ_G0036779.1 mouse_genomes_project 1 34757358 34757451 - Gm23792 snRNA snRNA MGP_CBAJ_T0023173.1 MGP_CBAJ_G0016497.1 mouse_genomes_project 1 189554330 189556674 - MGP_CBAJ_P0023173 Klhdc9 protein_coding protein_coding MGP_CBAJ_T0020928.1 MGP_CBAJ_G0016029.1 mouse_genomes_project 1 96365614 96375787 - MGP_CBAJ_P0020928 Glrp1 protein_coding protein_coding MGP_CBAJ_T0098564.1 MGP_CBAJ_G0036819.1 mouse_genomes_project 1 143756981 143757088 - Gm23623 snRNA snRNA MGP_CBAJ_T0005763.1 MGP_CBAJ_G0004829.1 mouse_genomes_project 1 105500782 105518146 - Gm29601 lincRNA lincRNA MGP_CBAJ_T0000646.1 MGP_CBAJ_G0000586.1 mouse_genomes_project 1 167261966 167264401 + TEC TEC MGP_CBAJ_T0023379.1 MGP_CBAJ_G0016567.1 mouse_genomes_project 1 193302031 193309478 + MGP_CBAJ_P0023379 Olfr414 protein_coding protein_coding MGP_CBAJ_T0023380.1 MGP_CBAJ_G0016567.1 mouse_genomes_project 1 193308351 193309306 + MGP_CBAJ_P0023380 Olfr414 protein_coding protein_coding MGP_CBAJ_T0011925.1 MGP_CBAJ_G0010037.1 mouse_genomes_project 1 65018081 65020074 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023607.1 MGP_CBAJ_G0016614.1 mouse_genomes_project 1 200637715 200641090 + MGP_CBAJ_P0023607 Lefty1 protein_coding protein_coding MGP_CBAJ_T0023608.1 MGP_CBAJ_G0016614.1 mouse_genomes_project 1 200639560 200640500 + Lefty1 protein_coding retained_intron MGP_CBAJ_T0000447.1 MGP_CBAJ_G0000389.1 mouse_genomes_project 1 63902537 63904409 - TEC TEC MGP_CBAJ_T0000622.1 MGP_CBAJ_G0000562.1 mouse_genomes_project 1 152373925 152374346 + TEC TEC MGP_CBAJ_T0020191.1 MGP_CBAJ_G0015887.1 mouse_genomes_project 1 80296334 80304028 - MGP_CBAJ_P0020191 Aamp protein_coding protein_coding MGP_CBAJ_T0020192.1 MGP_CBAJ_G0015887.1 mouse_genomes_project 1 80296340 80303306 - Aamp protein_coding retained_intron MGP_CBAJ_T0020193.1 MGP_CBAJ_G0015887.1 mouse_genomes_project 1 80296340 80303970 - MGP_CBAJ_P0020193 Aamp protein_coding protein_coding MGP_CBAJ_T0020194.1 MGP_CBAJ_G0015887.1 mouse_genomes_project 1 80297427 80303269 - MGP_CBAJ_P0020194 Aamp protein_coding protein_coding MGP_CBAJ_T0020195.1 MGP_CBAJ_G0015887.1 mouse_genomes_project 1 80297554 80299637 - Aamp protein_coding retained_intron MGP_CBAJ_T0020196.1 MGP_CBAJ_G0015887.1 mouse_genomes_project 1 80299690 80303711 - MGP_CBAJ_P0020196 Aamp protein_coding protein_coding MGP_CBAJ_T0018971.1 MGP_CBAJ_G0015657.1 mouse_genomes_project 1 35561593 35694788 + MGP_CBAJ_P0018971 protein_coding protein_coding MGP_CBAJ_T0018972.1 MGP_CBAJ_G0015657.1 mouse_genomes_project 1 35617484 35693878 + MGP_CBAJ_P0018972 protein_coding protein_coding MGP_CBAJ_T0018973.1 MGP_CBAJ_G0015657.1 mouse_genomes_project 1 35632971 35689177 + MGP_CBAJ_P0018973 protein_coding protein_coding MGP_CBAJ_T0018974.1 MGP_CBAJ_G0015657.1 mouse_genomes_project 1 35683797 35695364 + MGP_CBAJ_P0018974 protein_coding protein_coding MGP_CBAJ_T0018975.1 MGP_CBAJ_G0015657.1 mouse_genomes_project 1 35683814 35691262 + protein_coding retained_intron MGP_CBAJ_T0018976.1 MGP_CBAJ_G0015657.1 mouse_genomes_project 1 35683815 35688731 + protein_coding retained_intron MGP_CBAJ_T0018977.1 MGP_CBAJ_G0015657.1 mouse_genomes_project 1 35683834 35690938 + MGP_CBAJ_P0018977 protein_coding nonsense_mediated_decay MGP_CBAJ_T0005844.1 MGP_CBAJ_G0004894.1 mouse_genomes_project 1 163626180 163641612 - Gm29515 lincRNA lincRNA MGP_CBAJ_T0011758.1 MGP_CBAJ_G0009870.1 mouse_genomes_project 1 8390988 8392434 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0019365.1 MGP_CBAJ_G0015732.1 mouse_genomes_project 1 46232699 46234513 + Ercc5 protein_coding retained_intron MGP_CBAJ_T0019366.1 MGP_CBAJ_G0015732.1 mouse_genomes_project 1 46232802 46271148 + Ercc5 protein_coding retained_intron MGP_CBAJ_T0019367.1 MGP_CBAJ_G0015732.1 mouse_genomes_project 1 46232802 46271148 + MGP_CBAJ_P0019367 Ercc5 protein_coding protein_coding MGP_CBAJ_T0019368.1 MGP_CBAJ_G0015732.1 mouse_genomes_project 1 46232864 46247179 + Ercc5 protein_coding processed_transcript MGP_CBAJ_T0019369.1 MGP_CBAJ_G0015732.1 mouse_genomes_project 1 46232887 46243591 + Ercc5 protein_coding processed_transcript MGP_CBAJ_T0019370.1 MGP_CBAJ_G0015732.1 mouse_genomes_project 1 46242279 46253968 + Ercc5 protein_coding retained_intron MGP_CBAJ_T0019371.1 MGP_CBAJ_G0015732.1 mouse_genomes_project 1 46244165 46254187 + Ercc5 protein_coding retained_intron MGP_CBAJ_T0020528.1 MGP_CBAJ_G0015938.1 mouse_genomes_project 1 84519500 84625171 - MGP_CBAJ_P0020528 Pax3 protein_coding protein_coding MGP_CBAJ_T0020529.1 MGP_CBAJ_G0015938.1 mouse_genomes_project 1 84519503 84625467 - MGP_CBAJ_P0020529 Pax3 protein_coding protein_coding MGP_CBAJ_T0020530.1 MGP_CBAJ_G0015938.1 mouse_genomes_project 1 84611788 84625446 - Pax3 protein_coding processed_transcript MGP_CBAJ_T0020636.1 MGP_CBAJ_G0015963.1 mouse_genomes_project 1 90007877 90032552 - MGP_CBAJ_P0020636 Slc19a3 protein_coding protein_coding MGP_CBAJ_T0020637.1 MGP_CBAJ_G0015963.1 mouse_genomes_project 1 90007878 90014503 - Slc19a3 protein_coding processed_transcript MGP_CBAJ_T0020638.1 MGP_CBAJ_G0015963.1 mouse_genomes_project 1 90009154 90032535 - MGP_CBAJ_P0020638 Slc19a3 protein_coding protein_coding MGP_CBAJ_T0023411.1 MGP_CBAJ_G0016575.1 mouse_genomes_project 1 194637928 194644045 - MGP_CBAJ_P0023411 Chml protein_coding protein_coding MGP_CBAJ_T0005973.1 MGP_CBAJ_G0004993.1 mouse_genomes_project 1 214122749 214124472 - Gm31406 lincRNA lincRNA MGP_CBAJ_T0020853.1 MGP_CBAJ_G0016010.1 mouse_genomes_project 1 95234711 95350750 + MGP_CBAJ_P0020853 Inpp5d protein_coding protein_coding MGP_CBAJ_T0020854.1 MGP_CBAJ_G0016010.1 mouse_genomes_project 1 95234755 95249764 + Inpp5d protein_coding retained_intron MGP_CBAJ_T0020855.1 MGP_CBAJ_G0016010.1 mouse_genomes_project 1 95234761 95350746 + MGP_CBAJ_P0020855 Inpp5d protein_coding protein_coding MGP_CBAJ_T0020856.1 MGP_CBAJ_G0016010.1 mouse_genomes_project 1 95234788 95262492 + Inpp5d protein_coding processed_transcript MGP_CBAJ_T0020857.1 MGP_CBAJ_G0016010.1 mouse_genomes_project 1 95234797 95350746 + MGP_CBAJ_P0020857 Inpp5d protein_coding nonsense_mediated_decay MGP_CBAJ_T0020858.1 MGP_CBAJ_G0016010.1 mouse_genomes_project 1 95234888 95349566 + MGP_CBAJ_P0020858 Inpp5d protein_coding protein_coding MGP_CBAJ_T0020859.1 MGP_CBAJ_G0016010.1 mouse_genomes_project 1 95235026 95290679 + MGP_CBAJ_P0020859 Inpp5d protein_coding protein_coding MGP_CBAJ_T0020860.1 MGP_CBAJ_G0016010.1 mouse_genomes_project 1 95236073 95290603 + MGP_CBAJ_P0020860 Inpp5d protein_coding protein_coding MGP_CBAJ_T0020861.1 MGP_CBAJ_G0016010.1 mouse_genomes_project 1 95298971 95350745 + MGP_CBAJ_P0020861 Inpp5d protein_coding protein_coding MGP_CBAJ_T0020862.1 MGP_CBAJ_G0016010.1 mouse_genomes_project 1 95339583 95342402 + Inpp5d protein_coding processed_transcript MGP_CBAJ_T0002900.1 MGP_CBAJ_G0002724.1 mouse_genomes_project 1 200656861 200663126 - 2210411M09Rik antisense antisense MGP_CBAJ_T0022719.1 MGP_CBAJ_G0016399.1 mouse_genomes_project 1 179092701 179438559 - MGP_CBAJ_P0022719 Dnm3 protein_coding protein_coding MGP_CBAJ_T0022720.1 MGP_CBAJ_G0016399.1 mouse_genomes_project 1 179092706 179095953 - Dnm3 protein_coding retained_intron MGP_CBAJ_T0022721.1 MGP_CBAJ_G0016399.1 mouse_genomes_project 1 179097529 179649710 - MGP_CBAJ_P0022721 Dnm3 protein_coding unknown_likely_coding MGP_CBAJ_T0022722.1 MGP_CBAJ_G0016399.1 mouse_genomes_project 1 179097533 179649921 - MGP_CBAJ_P0022722 Dnm3 protein_coding protein_coding MGP_CBAJ_T0022723.1 MGP_CBAJ_G0016399.1 mouse_genomes_project 1 179100443 179649921 - MGP_CBAJ_P0022723 Dnm3 protein_coding protein_coding MGP_CBAJ_T0022724.1 MGP_CBAJ_G0016399.1 mouse_genomes_project 1 179101746 179106245 - Dnm3 protein_coding retained_intron MGP_CBAJ_T0022725.1 MGP_CBAJ_G0016399.1 mouse_genomes_project 1 179123935 179438503 - MGP_CBAJ_P0022725 Dnm3 protein_coding protein_coding MGP_CBAJ_T0022726.1 MGP_CBAJ_G0016399.1 mouse_genomes_project 1 179134229 179268661 - Dnm3 protein_coding retained_intron MGP_CBAJ_T0022727.1 MGP_CBAJ_G0016399.1 mouse_genomes_project 1 179416243 179438518 - Dnm3 protein_coding processed_transcript MGP_CBAJ_T0022728.1 MGP_CBAJ_G0016399.1 mouse_genomes_project 1 179425420 179456542 - Dnm3 protein_coding processed_transcript MGP_CBAJ_T0022729.1 MGP_CBAJ_G0016399.1 mouse_genomes_project 1 179463251 179649899 - Dnm3 protein_coding retained_intron MGP_CBAJ_T0022730.1 MGP_CBAJ_G0016399.1 mouse_genomes_project 1 179535628 179587591 - Dnm3 protein_coding processed_transcript MGP_CBAJ_T0022731.1 MGP_CBAJ_G0016399.1 mouse_genomes_project 1 179565571 179568045 - Dnm3 protein_coding retained_intron MGP_CBAJ_T0021043.1 MGP_CBAJ_G0016053.1 mouse_genomes_project 1 99694663 99727911 + MGP_CBAJ_P0021043 Traf3ip1 protein_coding protein_coding MGP_CBAJ_T0021044.1 MGP_CBAJ_G0016053.1 mouse_genomes_project 1 99694710 99729262 + MGP_CBAJ_P0021044 Traf3ip1 protein_coding protein_coding MGP_CBAJ_T0021045.1 MGP_CBAJ_G0016053.1 mouse_genomes_project 1 99718208 99729262 + Traf3ip1 protein_coding retained_intron MGP_CBAJ_T0011931.1 MGP_CBAJ_G0010043.1 mouse_genomes_project 1 65608374 65611001 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099777.1 MGP_CBAJ_G0038032.1 mouse_genomes_project 1 103249228 103249297 - Gm23389 snoRNA snoRNA MGP_CBAJ_T0012068.1 MGP_CBAJ_G0010180.1 mouse_genomes_project 1 130167335 130168323 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023171.1 MGP_CBAJ_G0016496.1 mouse_genomes_project 1 189538974 189555142 + MGP_CBAJ_P0023171 Pfdn2 protein_coding protein_coding MGP_CBAJ_T0023172.1 MGP_CBAJ_G0016496.1 mouse_genomes_project 1 189552270 189553854 + Pfdn2 protein_coding processed_transcript MGP_CBAJ_T0023515.1 MGP_CBAJ_G0016599.1 mouse_genomes_project 1 199314916 199373458 - MGP_CBAJ_P0023515 Ahctf1 protein_coding protein_coding MGP_CBAJ_T0023516.1 MGP_CBAJ_G0016599.1 mouse_genomes_project 1 199315359 199322432 - MGP_CBAJ_P0023516 Ahctf1 protein_coding protein_coding MGP_CBAJ_T0023517.1 MGP_CBAJ_G0016599.1 mouse_genomes_project 1 199316113 199323603 - Ahctf1 protein_coding retained_intron MGP_CBAJ_T0023518.1 MGP_CBAJ_G0016599.1 mouse_genomes_project 1 199323721 199328012 - MGP_CBAJ_P0023518 Ahctf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023519.1 MGP_CBAJ_G0016599.1 mouse_genomes_project 1 199330285 199335930 - MGP_CBAJ_P0023519 Ahctf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023520.1 MGP_CBAJ_G0016599.1 mouse_genomes_project 1 199338317 199340941 - MGP_CBAJ_P0023520 Ahctf1 protein_coding protein_coding MGP_CBAJ_T0023521.1 MGP_CBAJ_G0016599.1 mouse_genomes_project 1 199362801 199365912 - Ahctf1 protein_coding retained_intron MGP_CBAJ_T0023522.1 MGP_CBAJ_G0016599.1 mouse_genomes_project 1 199368616 199371850 - Ahctf1 protein_coding retained_intron MGP_CBAJ_T0023523.1 MGP_CBAJ_G0016599.1 mouse_genomes_project 1 199368622 199373384 - Ahctf1 protein_coding retained_intron MGP_CBAJ_T0018726.1 MGP_CBAJ_G0015600.1 mouse_genomes_project 1 15006381 15095138 - MGP_CBAJ_P0018726 Ube2w protein_coding protein_coding MGP_CBAJ_T0018727.1 MGP_CBAJ_G0015600.1 mouse_genomes_project 1 15034357 15061930 - Ube2w protein_coding processed_transcript MGP_CBAJ_T0018728.1 MGP_CBAJ_G0015600.1 mouse_genomes_project 1 15042214 15095315 - MGP_CBAJ_P0018728 Ube2w protein_coding protein_coding MGP_CBAJ_T0018729.1 MGP_CBAJ_G0015600.1 mouse_genomes_project 1 15058467 15095085 - MGP_CBAJ_P0018729 Ube2w protein_coding nonsense_mediated_decay MGP_CBAJ_T0018730.1 MGP_CBAJ_G0015600.1 mouse_genomes_project 1 15060689 15095110 - Ube2w protein_coding retained_intron MGP_CBAJ_T0018731.1 MGP_CBAJ_G0015600.1 mouse_genomes_project 1 15078028 15095110 - Ube2w protein_coding retained_intron MGP_CBAJ_T0020521.1 MGP_CBAJ_G0015937.1 mouse_genomes_project 1 83702765 83854333 - MGP_CBAJ_P0020521 Epha4 protein_coding protein_coding MGP_CBAJ_T0020522.1 MGP_CBAJ_G0015937.1 mouse_genomes_project 1 83702769 83854324 - MGP_CBAJ_P0020522 Epha4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020523.1 MGP_CBAJ_G0015937.1 mouse_genomes_project 1 83708722 83854333 - MGP_CBAJ_P0020523 Epha4 protein_coding protein_coding MGP_CBAJ_T0020524.1 MGP_CBAJ_G0015937.1 mouse_genomes_project 1 83709196 83718043 - MGP_CBAJ_P0020524 Epha4 protein_coding protein_coding MGP_CBAJ_T0020525.1 MGP_CBAJ_G0015937.1 mouse_genomes_project 1 83709214 83854324 - MGP_CBAJ_P0020525 Epha4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020526.1 MGP_CBAJ_G0015937.1 mouse_genomes_project 1 83739417 83854330 - Epha4 protein_coding retained_intron MGP_CBAJ_T0020527.1 MGP_CBAJ_G0015937.1 mouse_genomes_project 1 83743829 83854328 - MGP_CBAJ_P0020527 Epha4 protein_coding protein_coding MGP_CBAJ_T0020315.1 MGP_CBAJ_G0015910.1 mouse_genomes_project 1 81062393 81068792 - MGP_CBAJ_P0020315 Ihh protein_coding protein_coding MGP_CBAJ_T0020316.1 MGP_CBAJ_G0015910.1 mouse_genomes_project 1 81064843 81068562 - Ihh protein_coding retained_intron MGP_CBAJ_T0022423.1 MGP_CBAJ_G0016351.1 mouse_genomes_project 1 171387227 171406618 - MGP_CBAJ_P0022423 Mr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022424.1 MGP_CBAJ_G0016351.1 mouse_genomes_project 1 171387824 171393969 - Mr1 protein_coding retained_intron MGP_CBAJ_T0022425.1 MGP_CBAJ_G0016351.1 mouse_genomes_project 1 171387828 171406597 - MGP_CBAJ_P0022425 Mr1 protein_coding protein_coding MGP_CBAJ_T0022426.1 MGP_CBAJ_G0016351.1 mouse_genomes_project 1 171388781 171406618 - MGP_CBAJ_P0022426 Mr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022427.1 MGP_CBAJ_G0016351.1 mouse_genomes_project 1 171395734 171406628 - Mr1 protein_coding retained_intron MGP_CBAJ_T0000475.1 MGP_CBAJ_G0000417.1 mouse_genomes_project 1 73984573 73985975 - TEC TEC MGP_CBAJ_T0012155.1 MGP_CBAJ_G0010267.1 mouse_genomes_project 1 171446942 171447524 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005890.1 MGP_CBAJ_G0004929.1 mouse_genomes_project 1 182509191 182513282 - 4930568G15Rik lincRNA lincRNA MGP_CBAJ_T0005891.1 MGP_CBAJ_G0004929.1 mouse_genomes_project 1 182511784 182537558 - 4930568G15Rik lincRNA lincRNA MGP_CBAJ_T0011913.1 MGP_CBAJ_G0010025.1 mouse_genomes_project 1 61477499 61480253 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012199.1 MGP_CBAJ_G0010311.1 mouse_genomes_project 1 195953132 195953967 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009396.1 MGP_CBAJ_G0007534.1 mouse_genomes_project 1 93769363 93769510 - Mir3535 miRNA miRNA MGP_CBAJ_T0012059.1 MGP_CBAJ_G0010171.1 mouse_genomes_project 1 123781671 123783815 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0019663.1 MGP_CBAJ_G0015787.1 mouse_genomes_project 1 61979737 62063017 + MGP_CBAJ_P0019663 Aox1 protein_coding protein_coding MGP_CBAJ_T0019664.1 MGP_CBAJ_G0015787.1 mouse_genomes_project 1 61979770 62024096 + Aox1 protein_coding retained_intron MGP_CBAJ_T0012109.1 MGP_CBAJ_G0010221.1 mouse_genomes_project 1 150736103 150741723 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002850.1 MGP_CBAJ_G0002683.1 mouse_genomes_project 1 172130581 172172220 + Gm37571 antisense antisense MGP_CBAJ_T0011852.1 MGP_CBAJ_G0009964.1 mouse_genomes_project 1 42552179 42552675 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018531.1 MGP_CBAJ_G0015567.1 mouse_genomes_project 1 5935710 6985051 - MGP_CBAJ_P0018531 Sntg1 protein_coding protein_coding MGP_CBAJ_T0018532.1 MGP_CBAJ_G0015567.1 mouse_genomes_project 1 5935710 6984386 - MGP_CBAJ_P0018532 Sntg1 protein_coding protein_coding MGP_CBAJ_T0018533.1 MGP_CBAJ_G0015567.1 mouse_genomes_project 1 5935710 6984677 - MGP_CBAJ_P0018533 Sntg1 protein_coding protein_coding MGP_CBAJ_T0018534.1 MGP_CBAJ_G0015567.1 mouse_genomes_project 1 5936913 6985692 - MGP_CBAJ_P0018534 Sntg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018535.1 MGP_CBAJ_G0015567.1 mouse_genomes_project 1 5937418 6081405 - Sntg1 protein_coding processed_transcript MGP_CBAJ_T0018536.1 MGP_CBAJ_G0015567.1 mouse_genomes_project 1 5937660 6081364 - Sntg1 protein_coding processed_transcript MGP_CBAJ_T0018537.1 MGP_CBAJ_G0015567.1 mouse_genomes_project 1 5937710 6439190 - MGP_CBAJ_P0018537 Sntg1 protein_coding protein_coding MGP_CBAJ_T0018538.1 MGP_CBAJ_G0015567.1 mouse_genomes_project 1 6312835 6985095 - MGP_CBAJ_P0018538 Sntg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018539.1 MGP_CBAJ_G0015567.1 mouse_genomes_project 1 6419878 6985322 - Sntg1 protein_coding retained_intron MGP_CBAJ_T0018540.1 MGP_CBAJ_G0015567.1 mouse_genomes_project 1 6607171 6609286 - Sntg1 protein_coding retained_intron MGP_CBAJ_T0018541.1 MGP_CBAJ_G0015567.1 mouse_genomes_project 1 6607434 6984039 - Sntg1 protein_coding processed_transcript MGP_CBAJ_T0000632.1 MGP_CBAJ_G0000572.1 mouse_genomes_project 1 155822109 155825219 - TEC TEC MGP_CBAJ_T0011116.1 MGP_CBAJ_G0009254.1 mouse_genomes_project 1 33324924 33325216 + Gm23024 misc_RNA misc_RNA MGP_CBAJ_T0098224.1 MGP_CBAJ_G0036497.1 mouse_genomes_project 1 38064395 38067327 - Gm38115 sense_intronic sense_intronic MGP_CBAJ_T0019945.1 MGP_CBAJ_G0015833.1 mouse_genomes_project 1 68481636 68518402 - MGP_CBAJ_P0019945 Mdh1b protein_coding protein_coding MGP_CBAJ_T0023208.1 MGP_CBAJ_G0016507.1 mouse_genomes_project 1 189928485 189951243 + MGP_CBAJ_P0023208 Cd48 protein_coding protein_coding MGP_CBAJ_T0023209.1 MGP_CBAJ_G0016507.1 mouse_genomes_project 1 189928486 189951241 + MGP_CBAJ_P0023209 Cd48 protein_coding protein_coding MGP_CBAJ_T0005577.1 MGP_CBAJ_G0004689.1 mouse_genomes_project 1 22587474 22587818 + Gm29107 lincRNA lincRNA MGP_CBAJ_T0002707.1 MGP_CBAJ_G0002575.1 mouse_genomes_project 1 35691399 35693957 - Gm38336 antisense antisense MGP_CBAJ_T0019665.1 MGP_CBAJ_G0015788.1 mouse_genomes_project 1 62071814 62073697 + Aox3 protein_coding retained_intron MGP_CBAJ_T0019666.1 MGP_CBAJ_G0015788.1 mouse_genomes_project 1 62071820 62162993 + MGP_CBAJ_P0019666 Aox3 protein_coding protein_coding MGP_CBAJ_T0019667.1 MGP_CBAJ_G0015788.1 mouse_genomes_project 1 62071822 62081074 + Aox3 protein_coding retained_intron MGP_CBAJ_T0019668.1 MGP_CBAJ_G0015788.1 mouse_genomes_project 1 62071870 62102536 + MGP_CBAJ_P0019668 Aox3 protein_coding protein_coding MGP_CBAJ_T0019669.1 MGP_CBAJ_G0015788.1 mouse_genomes_project 1 62132075 62134700 + Aox3 protein_coding retained_intron MGP_CBAJ_T0019212.1 MGP_CBAJ_G0015698.1 mouse_genomes_project 1 40642430 40739297 + MGP_CBAJ_P0019212 Npas2 protein_coding protein_coding MGP_CBAJ_T0019213.1 MGP_CBAJ_G0015698.1 mouse_genomes_project 1 40642911 40828302 + MGP_CBAJ_P0019213 Npas2 protein_coding protein_coding MGP_CBAJ_T0019214.1 MGP_CBAJ_G0015698.1 mouse_genomes_project 1 40806718 40810517 + Npas2 protein_coding processed_transcript MGP_CBAJ_T0016723.1 MGP_CBAJ_G0014829.1 mouse_genomes_project 1 35307096 35308487 - Gm28417 processed_transcript retained_intron MGP_CBAJ_T0016724.1 MGP_CBAJ_G0014829.1 mouse_genomes_project 1 35308212 35311203 - Gm28417 processed_transcript antisense MGP_CBAJ_T0016725.1 MGP_CBAJ_G0014829.1 mouse_genomes_project 1 35309565 35311167 - Gm28417 processed_transcript antisense MGP_CBAJ_T0012011.1 MGP_CBAJ_G0010123.1 mouse_genomes_project 1 101853955 101854744 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000509.1 MGP_CBAJ_G0000451.1 mouse_genomes_project 1 91833543 91837774 - TEC TEC MGP_CBAJ_T0000572.1 MGP_CBAJ_G0000514.1 mouse_genomes_project 1 138396909 138399606 - TEC TEC MGP_CBAJ_T0011126.1 MGP_CBAJ_G0009264.1 mouse_genomes_project 1 93121848 93122098 + Gm22906 misc_RNA misc_RNA MGP_CBAJ_T0020555.1 MGP_CBAJ_G0015945.1 mouse_genomes_project 1 85359901 85363172 + MGP_CBAJ_P0020555 Kcne4 protein_coding protein_coding MGP_CBAJ_T0020556.1 MGP_CBAJ_G0015945.1 mouse_genomes_project 1 85360070 85363172 + MGP_CBAJ_P0020556 Kcne4 protein_coding protein_coding MGP_CBAJ_T0000417.1 MGP_CBAJ_G0000359.1 mouse_genomes_project 1 38914332 38916189 + TEC TEC MGP_CBAJ_T0018823.1 MGP_CBAJ_G0015627.1 mouse_genomes_project 1 22657705 22674451 - MGP_CBAJ_P0018823 Ogfrl1 protein_coding protein_coding MGP_CBAJ_T0018824.1 MGP_CBAJ_G0015627.1 mouse_genomes_project 1 22660993 22672047 - Ogfrl1 protein_coding retained_intron MGP_CBAJ_T0018825.1 MGP_CBAJ_G0015627.1 mouse_genomes_project 1 22661528 22693477 - MGP_CBAJ_P0018825 Ogfrl1 protein_coding protein_coding MGP_CBAJ_T0018826.1 MGP_CBAJ_G0015627.1 mouse_genomes_project 1 22683035 22693708 - Ogfrl1 protein_coding processed_transcript MGP_CBAJ_T0002804.1 MGP_CBAJ_G0002648.1 mouse_genomes_project 1 131328095 131337217 - Gm27184 antisense antisense MGP_CBAJ_T0020463.1 MGP_CBAJ_G0015929.1 mouse_genomes_project 1 81525353 81538346 + MGP_CBAJ_P0020463 Gmppa protein_coding protein_coding MGP_CBAJ_T0020464.1 MGP_CBAJ_G0015929.1 mouse_genomes_project 1 81525366 81538345 + MGP_CBAJ_P0020464 Gmppa protein_coding protein_coding MGP_CBAJ_T0020465.1 MGP_CBAJ_G0015929.1 mouse_genomes_project 1 81525384 81528298 + MGP_CBAJ_P0020465 Gmppa protein_coding protein_coding MGP_CBAJ_T0020466.1 MGP_CBAJ_G0015929.1 mouse_genomes_project 1 81525390 81535670 + MGP_CBAJ_P0020466 Gmppa protein_coding protein_coding MGP_CBAJ_T0020467.1 MGP_CBAJ_G0015929.1 mouse_genomes_project 1 81525391 81536687 + MGP_CBAJ_P0020467 Gmppa protein_coding protein_coding MGP_CBAJ_T0020468.1 MGP_CBAJ_G0015929.1 mouse_genomes_project 1 81525405 81536781 + MGP_CBAJ_P0020468 Gmppa protein_coding protein_coding MGP_CBAJ_T0020469.1 MGP_CBAJ_G0015929.1 mouse_genomes_project 1 81525407 81534557 + MGP_CBAJ_P0020469 Gmppa protein_coding protein_coding MGP_CBAJ_T0020470.1 MGP_CBAJ_G0015929.1 mouse_genomes_project 1 81525510 81536696 + MGP_CBAJ_P0020470 Gmppa protein_coding protein_coding MGP_CBAJ_T0020471.1 MGP_CBAJ_G0015929.1 mouse_genomes_project 1 81525536 81527752 + MGP_CBAJ_P0020471 Gmppa protein_coding protein_coding MGP_CBAJ_T0020472.1 MGP_CBAJ_G0015929.1 mouse_genomes_project 1 81526365 81537200 + MGP_CBAJ_P0020472 Gmppa protein_coding nonsense_mediated_decay MGP_CBAJ_T0020473.1 MGP_CBAJ_G0015929.1 mouse_genomes_project 1 81536791 81538104 + Gmppa protein_coding retained_intron MGP_CBAJ_T0020474.1 MGP_CBAJ_G0015929.1 mouse_genomes_project 1 81537337 81538345 + Gmppa protein_coding retained_intron MGP_CBAJ_T0020475.1 MGP_CBAJ_G0015929.1 mouse_genomes_project 1 81537395 81538351 + Gmppa protein_coding retained_intron MGP_CBAJ_T0098241.1 MGP_CBAJ_G0036513.1 mouse_genomes_project 1 151985505 151986751 + Gm26930 sense_intronic sense_intronic MGP_CBAJ_T0000650.1 MGP_CBAJ_G0000590.1 mouse_genomes_project 1 169310530 169313871 - TEC TEC MGP_CBAJ_T0020763.1 MGP_CBAJ_G0015989.1 mouse_genomes_project 1 93807761 93809675 - MGP_CBAJ_P0020763 Nmur1 protein_coding protein_coding MGP_CBAJ_T0002837.1 MGP_CBAJ_G0002674.1 mouse_genomes_project 1 161509352 161594334 - Gm29514 antisense antisense MGP_CBAJ_T0002838.1 MGP_CBAJ_G0002674.1 mouse_genomes_project 1 161518968 161594443 - Gm29514 antisense antisense MGP_CBAJ_T0002896.1 MGP_CBAJ_G0002721.1 mouse_genomes_project 1 199855492 199875145 + Gm31728 antisense antisense MGP_CBAJ_T0000733.1 MGP_CBAJ_G0000672.1 mouse_genomes_project 1 201173293 201174604 + TEC TEC MGP_CBAJ_T0023642.1 MGP_CBAJ_G0016622.1 mouse_genomes_project 1 201317693 201319513 - MGP_CBAJ_P0023642 Ccdc121 protein_coding protein_coding MGP_CBAJ_T0009447.1 MGP_CBAJ_G0007585.1 mouse_genomes_project 1 214627203 214627271 - Mir205 miRNA miRNA MGP_CBAJ_T0019019.1 MGP_CBAJ_G0015664.1 mouse_genomes_project 1 37402992 37436354 - MGP_CBAJ_P0019019 Kansl3 protein_coding protein_coding MGP_CBAJ_T0019020.1 MGP_CBAJ_G0015664.1 mouse_genomes_project 1 37402992 37436330 - MGP_CBAJ_P0019020 Kansl3 protein_coding protein_coding MGP_CBAJ_T0019021.1 MGP_CBAJ_G0015664.1 mouse_genomes_project 1 37404835 37435188 - MGP_CBAJ_P0019021 Kansl3 protein_coding protein_coding MGP_CBAJ_T0019022.1 MGP_CBAJ_G0015664.1 mouse_genomes_project 1 37404835 37436344 - MGP_CBAJ_P0019022 Kansl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019023.1 MGP_CBAJ_G0015664.1 mouse_genomes_project 1 37421882 37435215 - MGP_CBAJ_P0019023 Kansl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019024.1 MGP_CBAJ_G0015664.1 mouse_genomes_project 1 37425285 37436328 - MGP_CBAJ_P0019024 Kansl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019025.1 MGP_CBAJ_G0015664.1 mouse_genomes_project 1 37432799 37435215 - MGP_CBAJ_P0019025 Kansl3 protein_coding protein_coding MGP_CBAJ_T0019026.1 MGP_CBAJ_G0015664.1 mouse_genomes_project 1 37433082 37436330 - Kansl3 protein_coding retained_intron MGP_CBAJ_T0019027.1 MGP_CBAJ_G0015664.1 mouse_genomes_project 1 37435139 37436275 - MGP_CBAJ_P0019027 Kansl3 protein_coding protein_coding MGP_CBAJ_T0018677.1 MGP_CBAJ_G0015590.1 mouse_genomes_project 1 12367237 12523102 - MGP_CBAJ_P0018677 Eya1 protein_coding protein_coding MGP_CBAJ_T0018678.1 MGP_CBAJ_G0015590.1 mouse_genomes_project 1 12367241 12523137 - MGP_CBAJ_P0018678 Eya1 protein_coding protein_coding MGP_CBAJ_T0018679.1 MGP_CBAJ_G0015590.1 mouse_genomes_project 1 12367949 12523021 - MGP_CBAJ_P0018679 Eya1 protein_coding protein_coding MGP_CBAJ_T0018680.1 MGP_CBAJ_G0015590.1 mouse_genomes_project 1 12368926 12517450 - MGP_CBAJ_P0018680 Eya1 protein_coding protein_coding MGP_CBAJ_T0018681.1 MGP_CBAJ_G0015590.1 mouse_genomes_project 1 12408778 12434389 - MGP_CBAJ_P0018681 Eya1 protein_coding protein_coding MGP_CBAJ_T0018682.1 MGP_CBAJ_G0015590.1 mouse_genomes_project 1 12461583 12517499 - MGP_CBAJ_P0018682 Eya1 protein_coding protein_coding MGP_CBAJ_T0018683.1 MGP_CBAJ_G0015590.1 mouse_genomes_project 1 12479173 12517508 - MGP_CBAJ_P0018683 Eya1 protein_coding protein_coding MGP_CBAJ_T0018684.1 MGP_CBAJ_G0015590.1 mouse_genomes_project 1 12479241 12522738 - MGP_CBAJ_P0018684 Eya1 protein_coding protein_coding MGP_CBAJ_T0018685.1 MGP_CBAJ_G0015590.1 mouse_genomes_project 1 12514090 12522953 - Eya1 protein_coding retained_intron MGP_CBAJ_T0022209.1 MGP_CBAJ_G0016309.1 mouse_genomes_project 1 159081209 159088155 - MGP_CBAJ_P0022209 Rgs1 protein_coding protein_coding MGP_CBAJ_T0022210.1 MGP_CBAJ_G0016309.1 mouse_genomes_project 1 159082126 159087969 - Rgs1 protein_coding retained_intron MGP_CBAJ_T0022211.1 MGP_CBAJ_G0016309.1 mouse_genomes_project 1 159082885 159087973 - MGP_CBAJ_P0022211 Rgs1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022212.1 MGP_CBAJ_G0016309.1 mouse_genomes_project 1 159083508 159087973 - MGP_CBAJ_P0022212 Rgs1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022213.1 MGP_CBAJ_G0016309.1 mouse_genomes_project 1 159083585 159087971 - MGP_CBAJ_P0022213 Rgs1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022214.1 MGP_CBAJ_G0016309.1 mouse_genomes_project 1 159083585 159087941 - MGP_CBAJ_P0022214 Rgs1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022215.1 MGP_CBAJ_G0016309.1 mouse_genomes_project 1 159084375 159087972 - MGP_CBAJ_P0022215 Rgs1 protein_coding protein_coding MGP_CBAJ_T0022216.1 MGP_CBAJ_G0016309.1 mouse_genomes_project 1 159086705 159087971 - Rgs1 protein_coding retained_intron MGP_CBAJ_T0022217.1 MGP_CBAJ_G0016309.1 mouse_genomes_project 1 159086708 159087974 - Rgs1 protein_coding retained_intron MGP_CBAJ_T0021077.1 MGP_CBAJ_G0016061.1 mouse_genomes_project 1 100934775 100942550 + MGP_CBAJ_P0021077 Olfr1411 protein_coding protein_coding MGP_CBAJ_T0022931.1 MGP_CBAJ_G0016442.1 mouse_genomes_project 1 183716927 183760488 + MGP_CBAJ_P0022931 Gpa33 protein_coding protein_coding MGP_CBAJ_T0022932.1 MGP_CBAJ_G0016442.1 mouse_genomes_project 1 183717029 183751506 + MGP_CBAJ_P0022932 Gpa33 protein_coding protein_coding MGP_CBAJ_T0022933.1 MGP_CBAJ_G0016442.1 mouse_genomes_project 1 183717106 183748113 + Gpa33 protein_coding processed_transcript MGP_CBAJ_T0022934.1 MGP_CBAJ_G0016442.1 mouse_genomes_project 1 183717156 183760487 + MGP_CBAJ_P0022934 Gpa33 protein_coding protein_coding MGP_CBAJ_T0018447.1 MGP_CBAJ_G0015553.1 mouse_genomes_project 1 1168628 1341533 - MGP_CBAJ_P0018447 unknown_likely_coding unknown_likely_coding MGP_CBAJ_T0101442.1 MGP_CBAJ_G0039474.1 mouse_genomes_project 1 20259963 20260467 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099803.1 MGP_CBAJ_G0038058.1 mouse_genomes_project 1 163729902 163730031 - Gm22966 snoRNA snoRNA MGP_CBAJ_T0002753.1 MGP_CBAJ_G0002611.1 mouse_genomes_project 1 67334657 67337996 - Gm29083 antisense antisense MGP_CBAJ_T0020604.1 MGP_CBAJ_G0015957.1 mouse_genomes_project 1 89207789 89332494 + MGP_CBAJ_P0020604 Rhbdd1 protein_coding protein_coding MGP_CBAJ_T0020605.1 MGP_CBAJ_G0015957.1 mouse_genomes_project 1 89207979 89211066 + Rhbdd1 protein_coding retained_intron MGP_CBAJ_T0020606.1 MGP_CBAJ_G0015957.1 mouse_genomes_project 1 89230151 89332494 + MGP_CBAJ_P0020606 Rhbdd1 protein_coding protein_coding MGP_CBAJ_T0000450.1 MGP_CBAJ_G0000392.1 mouse_genomes_project 1 64234354 64239768 + TEC TEC MGP_CBAJ_T0022615.1 MGP_CBAJ_G0016380.1 mouse_genomes_project 1 176883150 176886597 + 4930523C07Rik protein_coding retained_intron MGP_CBAJ_T0022616.1 MGP_CBAJ_G0016380.1 mouse_genomes_project 1 176883152 176913797 + 4930523C07Rik protein_coding lincRNA MGP_CBAJ_T0022617.1 MGP_CBAJ_G0016380.1 mouse_genomes_project 1 176883152 176922484 + 4930523C07Rik protein_coding lincRNA MGP_CBAJ_T0022618.1 MGP_CBAJ_G0016380.1 mouse_genomes_project 1 176883173 176915056 + 4930523C07Rik protein_coding lincRNA MGP_CBAJ_T0022619.1 MGP_CBAJ_G0016380.1 mouse_genomes_project 1 176883215 176913766 + 4930523C07Rik protein_coding lincRNA MGP_CBAJ_T0022620.1 MGP_CBAJ_G0016380.1 mouse_genomes_project 1 176917438 176917738 + MGP_CBAJ_P0022620 4930523C07Rik protein_coding protein_coding MGP_CBAJ_T0021359.1 MGP_CBAJ_G0016126.1 mouse_genomes_project 1 122678568 122684634 - Dsel protein_coding processed_transcript MGP_CBAJ_T0021360.1 MGP_CBAJ_G0016126.1 mouse_genomes_project 1 122678572 122684784 - MGP_CBAJ_P0021360 Dsel protein_coding protein_coding MGP_CBAJ_T0021361.1 MGP_CBAJ_G0016126.1 mouse_genomes_project 1 122683189 122684749 - Dsel protein_coding processed_transcript MGP_CBAJ_T0021362.1 MGP_CBAJ_G0016126.1 mouse_genomes_project 1 122683961 122684746 - Dsel protein_coding processed_transcript MGP_CBAJ_T0000367.1 MGP_CBAJ_G0000312.1 mouse_genomes_project 1 20983893 20985440 - TEC TEC MGP_CBAJ_T0019661.1 MGP_CBAJ_G0015786.1 mouse_genomes_project 1 61944240 61975366 + MGP_CBAJ_P0019661 Sgol2a protein_coding protein_coding MGP_CBAJ_T0019662.1 MGP_CBAJ_G0015786.1 mouse_genomes_project 1 61972182 61975365 + Sgol2a protein_coding retained_intron MGP_CBAJ_T0000691.1 MGP_CBAJ_G0000631.1 mouse_genomes_project 1 180579669 180581943 - TEC TEC MGP_CBAJ_T0097886.1 MGP_CBAJ_G0036159.1 mouse_genomes_project 1 206450985 206451091 + Gm23821 rRNA rRNA MGP_CBAJ_T0099761.1 MGP_CBAJ_G0038016.1 mouse_genomes_project 1 63957922 63958006 + Gm26293 snoRNA snoRNA MGP_CBAJ_T0011858.1 MGP_CBAJ_G0009970.1 mouse_genomes_project 1 45965847 45966663 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011953.1 MGP_CBAJ_G0010065.1 mouse_genomes_project 1 71057305 71057643 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012132.1 MGP_CBAJ_G0010244.1 mouse_genomes_project 1 163331858 163332319 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000531.1 MGP_CBAJ_G0000473.1 mouse_genomes_project 1 99010762 99011599 - TEC TEC MGP_CBAJ_T0020919.1 MGP_CBAJ_G0016026.1 mouse_genomes_project 1 96075544 96117360 - MGP_CBAJ_P0020919 Hjurp protein_coding protein_coding MGP_CBAJ_T0020920.1 MGP_CBAJ_G0016026.1 mouse_genomes_project 1 96075694 96117309 - MGP_CBAJ_P0020920 Hjurp protein_coding protein_coding MGP_CBAJ_T0020921.1 MGP_CBAJ_G0016026.1 mouse_genomes_project 1 96079519 96096809 - MGP_CBAJ_P0020921 Hjurp protein_coding protein_coding MGP_CBAJ_T0020922.1 MGP_CBAJ_G0016026.1 mouse_genomes_project 1 96096794 96098368 - Hjurp protein_coding retained_intron MGP_CBAJ_T0018693.1 MGP_CBAJ_G0015594.1 mouse_genomes_project 1 14176846 14224866 + MGP_CBAJ_P0018693 Terf1 protein_coding protein_coding MGP_CBAJ_T0018694.1 MGP_CBAJ_G0015594.1 mouse_genomes_project 1 14176857 14202150 + Terf1 protein_coding processed_transcript MGP_CBAJ_T0018695.1 MGP_CBAJ_G0015594.1 mouse_genomes_project 1 14176864 14224284 + MGP_CBAJ_P0018695 Terf1 protein_coding protein_coding MGP_CBAJ_T0018696.1 MGP_CBAJ_G0015594.1 mouse_genomes_project 1 14178842 14202238 + Terf1 protein_coding retained_intron MGP_CBAJ_T0022554.1 MGP_CBAJ_G0016371.1 mouse_genomes_project 1 173592855 173602333 - MGP_CBAJ_P0022554 Tex35 protein_coding protein_coding MGP_CBAJ_T0022555.1 MGP_CBAJ_G0016371.1 mouse_genomes_project 1 173592855 173602333 - MGP_CBAJ_P0022555 Tex35 protein_coding protein_coding MGP_CBAJ_T0022556.1 MGP_CBAJ_G0016371.1 mouse_genomes_project 1 173592863 173602332 - MGP_CBAJ_P0022556 Tex35 protein_coding protein_coding MGP_CBAJ_T0022557.1 MGP_CBAJ_G0016371.1 mouse_genomes_project 1 173592870 173602363 - MGP_CBAJ_P0022557 Tex35 protein_coding protein_coding MGP_CBAJ_T0022558.1 MGP_CBAJ_G0016371.1 mouse_genomes_project 1 173593029 173602071 - MGP_CBAJ_P0022558 Tex35 protein_coding protein_coding MGP_CBAJ_T0022559.1 MGP_CBAJ_G0016371.1 mouse_genomes_project 1 173593031 173602328 - MGP_CBAJ_P0022559 Tex35 protein_coding nonsense_mediated_decay MGP_CBAJ_T0097873.1 MGP_CBAJ_G0036146.1 mouse_genomes_project 1 97581372 97581487 + Gm25180 rRNA rRNA MGP_CBAJ_T0021509.1 MGP_CBAJ_G0016158.1 mouse_genomes_project 1 138144968 138350411 + MGP_CBAJ_P0021509 Gpr39 protein_coding protein_coding MGP_CBAJ_T0021510.1 MGP_CBAJ_G0016158.1 mouse_genomes_project 1 138315137 138349722 + Gpr39 protein_coding processed_transcript MGP_CBAJ_T0101469.1 MGP_CBAJ_G0039501.1 mouse_genomes_project 1 100933645 100933757 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0018614.1 MGP_CBAJ_G0015579.1 mouse_genomes_project 1 7927192 8037909 - MGP_CBAJ_P0018614 Arfgef1 protein_coding protein_coding MGP_CBAJ_T0018615.1 MGP_CBAJ_G0015579.1 mouse_genomes_project 1 7928311 7931325 - Arfgef1 protein_coding retained_intron MGP_CBAJ_T0018616.1 MGP_CBAJ_G0015579.1 mouse_genomes_project 1 7937023 7944168 - Arfgef1 protein_coding retained_intron MGP_CBAJ_T0018617.1 MGP_CBAJ_G0015579.1 mouse_genomes_project 1 7946048 7949702 - Arfgef1 protein_coding retained_intron MGP_CBAJ_T0018618.1 MGP_CBAJ_G0015579.1 mouse_genomes_project 1 7950395 7950944 - Arfgef1 protein_coding retained_intron MGP_CBAJ_T0018619.1 MGP_CBAJ_G0015579.1 mouse_genomes_project 1 7964650 8037909 - MGP_CBAJ_P0018619 Arfgef1 protein_coding protein_coding MGP_CBAJ_T0018620.1 MGP_CBAJ_G0015579.1 mouse_genomes_project 1 8009968 8011130 - Arfgef1 protein_coding retained_intron MGP_CBAJ_T0018621.1 MGP_CBAJ_G0015579.1 mouse_genomes_project 1 8010183 8015251 - Arfgef1 protein_coding retained_intron MGP_CBAJ_T0000379.1 MGP_CBAJ_G0000322.1 mouse_genomes_project 1 25172168 25175022 - TEC TEC MGP_CBAJ_T0021175.1 MGP_CBAJ_G0016083.1 mouse_genomes_project 1 101912761 101938518 + MGP_CBAJ_P0021175 Sept2 protein_coding protein_coding MGP_CBAJ_T0021176.1 MGP_CBAJ_G0016083.1 mouse_genomes_project 1 101912764 101939905 + MGP_CBAJ_P0021176 Sept2 protein_coding protein_coding MGP_CBAJ_T0021177.1 MGP_CBAJ_G0016083.1 mouse_genomes_project 1 101912781 101947924 + MGP_CBAJ_P0021177 Sept2 protein_coding protein_coding MGP_CBAJ_T0021178.1 MGP_CBAJ_G0016083.1 mouse_genomes_project 1 101912792 101937235 + Sept2 protein_coding retained_intron MGP_CBAJ_T0021179.1 MGP_CBAJ_G0016083.1 mouse_genomes_project 1 101912806 101936841 + MGP_CBAJ_P0021179 Sept2 protein_coding protein_coding MGP_CBAJ_T0021180.1 MGP_CBAJ_G0016083.1 mouse_genomes_project 1 101912830 101916135 + Sept2 protein_coding retained_intron MGP_CBAJ_T0021181.1 MGP_CBAJ_G0016083.1 mouse_genomes_project 1 101912830 101939909 + MGP_CBAJ_P0021181 Sept2 protein_coding protein_coding MGP_CBAJ_T0021182.1 MGP_CBAJ_G0016083.1 mouse_genomes_project 1 101912879 101939934 + MGP_CBAJ_P0021182 Sept2 protein_coding protein_coding MGP_CBAJ_T0021183.1 MGP_CBAJ_G0016083.1 mouse_genomes_project 1 101912991 101938436 + MGP_CBAJ_P0021183 Sept2 protein_coding protein_coding MGP_CBAJ_T0021184.1 MGP_CBAJ_G0016083.1 mouse_genomes_project 1 101912994 101938518 + MGP_CBAJ_P0021184 Sept2 protein_coding protein_coding MGP_CBAJ_T0021185.1 MGP_CBAJ_G0016083.1 mouse_genomes_project 1 101913244 101939932 + MGP_CBAJ_P0021185 Sept2 protein_coding protein_coding MGP_CBAJ_T0021186.1 MGP_CBAJ_G0016083.1 mouse_genomes_project 1 101944592 101946419 + Sept2 protein_coding retained_intron MGP_CBAJ_T0021187.1 MGP_CBAJ_G0016083.1 mouse_genomes_project 1 101944967 101946746 + MGP_CBAJ_P0021187 Sept2 protein_coding protein_coding MGP_CBAJ_T0021894.1 MGP_CBAJ_G0016244.1 mouse_genomes_project 1 147919410 147921970 + MGP_CBAJ_P0021894 Myog protein_coding protein_coding MGP_CBAJ_T0011932.1 MGP_CBAJ_G0010044.1 mouse_genomes_project 1 65684471 65685173 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000644.1 MGP_CBAJ_G0000584.1 mouse_genomes_project 1 166002204 166007144 + TEC TEC MGP_CBAJ_T0018686.1 MGP_CBAJ_G0015591.1 mouse_genomes_project 1 13024881 13027526 - MGP_CBAJ_P0018686 Msc protein_coding protein_coding MGP_CBAJ_T0018687.1 MGP_CBAJ_G0015591.1 mouse_genomes_project 1 13025281 13026889 - MGP_CBAJ_P0018687 Msc protein_coding protein_coding MGP_CBAJ_T0018688.1 MGP_CBAJ_G0015591.1 mouse_genomes_project 1 13025470 13026201 - Msc protein_coding retained_intron MGP_CBAJ_T0018689.1 MGP_CBAJ_G0015591.1 mouse_genomes_project 1 13026302 13027528 - Msc protein_coding retained_intron MGP_CBAJ_T0011795.1 MGP_CBAJ_G0009907.1 mouse_genomes_project 1 21974092 21974894 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021789.1 MGP_CBAJ_G0016219.1 mouse_genomes_project 1 146351915 146427861 - MGP_CBAJ_P0021789 Mdm4 protein_coding protein_coding MGP_CBAJ_T0021790.1 MGP_CBAJ_G0016219.1 mouse_genomes_project 1 146354084 146364679 - Mdm4 protein_coding processed_transcript MGP_CBAJ_T0021791.1 MGP_CBAJ_G0016219.1 mouse_genomes_project 1 146382599 146427871 - MGP_CBAJ_P0021791 Mdm4 protein_coding protein_coding MGP_CBAJ_T0021792.1 MGP_CBAJ_G0016219.1 mouse_genomes_project 1 146383156 146427880 - MGP_CBAJ_P0021792 Mdm4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021793.1 MGP_CBAJ_G0016219.1 mouse_genomes_project 1 146383971 146427877 - MGP_CBAJ_P0021793 Mdm4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021794.1 MGP_CBAJ_G0016219.1 mouse_genomes_project 1 146384098 146427879 - MGP_CBAJ_P0021794 Mdm4 protein_coding protein_coding MGP_CBAJ_T0021795.1 MGP_CBAJ_G0016219.1 mouse_genomes_project 1 146390168 146421088 - Mdm4 protein_coding processed_transcript MGP_CBAJ_T0021796.1 MGP_CBAJ_G0016219.1 mouse_genomes_project 1 146390171 146400624 - Mdm4 protein_coding retained_intron MGP_CBAJ_T0021797.1 MGP_CBAJ_G0016219.1 mouse_genomes_project 1 146392966 146394923 - Mdm4 protein_coding retained_intron MGP_CBAJ_T0021798.1 MGP_CBAJ_G0016219.1 mouse_genomes_project 1 146394671 146400427 - Mdm4 protein_coding retained_intron MGP_CBAJ_T0021799.1 MGP_CBAJ_G0016219.1 mouse_genomes_project 1 146406976 146427853 - Mdm4 protein_coding retained_intron MGP_CBAJ_T0021800.1 MGP_CBAJ_G0016219.1 mouse_genomes_project 1 146407030 146435734 - MGP_CBAJ_P0021800 Mdm4 protein_coding protein_coding MGP_CBAJ_T0021801.1 MGP_CBAJ_G0016219.1 mouse_genomes_project 1 146418867 146427861 - Mdm4 protein_coding retained_intron MGP_CBAJ_T0012183.1 MGP_CBAJ_G0010295.1 mouse_genomes_project 1 184394144 184398579 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101460.1 MGP_CBAJ_G0039492.1 mouse_genomes_project 1 95885957 95886791 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0023907.1 MGP_CBAJ_G0016677.1 mouse_genomes_project 1 212240074 212257153 - MGP_CBAJ_P0023907 Nenf protein_coding protein_coding MGP_CBAJ_T0022238.1 MGP_CBAJ_G0016316.1 mouse_genomes_project 1 166047868 166085672 - MGP_CBAJ_P0022238 BC003331 protein_coding protein_coding MGP_CBAJ_T0022239.1 MGP_CBAJ_G0016316.1 mouse_genomes_project 1 166048102 166085647 - MGP_CBAJ_P0022239 BC003331 protein_coding protein_coding MGP_CBAJ_T0022240.1 MGP_CBAJ_G0016316.1 mouse_genomes_project 1 166048102 166085354 - MGP_CBAJ_P0022240 BC003331 protein_coding protein_coding MGP_CBAJ_T0022241.1 MGP_CBAJ_G0016316.1 mouse_genomes_project 1 166049080 166085311 - MGP_CBAJ_P0022241 BC003331 protein_coding protein_coding MGP_CBAJ_T0022242.1 MGP_CBAJ_G0016316.1 mouse_genomes_project 1 166049091 166085335 - MGP_CBAJ_P0022242 BC003331 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022243.1 MGP_CBAJ_G0016316.1 mouse_genomes_project 1 166065913 166075063 - BC003331 protein_coding retained_intron MGP_CBAJ_T0022244.1 MGP_CBAJ_G0016316.1 mouse_genomes_project 1 166066641 166085529 - BC003331 protein_coding processed_transcript MGP_CBAJ_T0022245.1 MGP_CBAJ_G0016316.1 mouse_genomes_project 1 166076869 166085340 - BC003331 protein_coding retained_intron MGP_CBAJ_T0022246.1 MGP_CBAJ_G0016316.1 mouse_genomes_project 1 166080599 166085339 - BC003331 protein_coding retained_intron MGP_CBAJ_T0011119.1 MGP_CBAJ_G0009257.1 mouse_genomes_project 1 53138084 53138216 - Gm27330 misc_RNA misc_RNA MGP_CBAJ_T0019005.1 MGP_CBAJ_G0015663.1 mouse_genomes_project 1 37372316 37386461 + MGP_CBAJ_P0019005 Arid5a protein_coding protein_coding MGP_CBAJ_T0019006.1 MGP_CBAJ_G0015663.1 mouse_genomes_project 1 37372337 37385546 + Arid5a protein_coding retained_intron MGP_CBAJ_T0019007.1 MGP_CBAJ_G0015663.1 mouse_genomes_project 1 37372337 37387145 + Arid5a protein_coding retained_intron MGP_CBAJ_T0019008.1 MGP_CBAJ_G0015663.1 mouse_genomes_project 1 37372337 37386472 + Arid5a protein_coding processed_transcript MGP_CBAJ_T0019009.1 MGP_CBAJ_G0015663.1 mouse_genomes_project 1 37372337 37387786 + MGP_CBAJ_P0019009 Arid5a protein_coding nonsense_mediated_decay MGP_CBAJ_T0019010.1 MGP_CBAJ_G0015663.1 mouse_genomes_project 1 37372337 37391287 + MGP_CBAJ_P0019010 Arid5a protein_coding protein_coding MGP_CBAJ_T0019011.1 MGP_CBAJ_G0015663.1 mouse_genomes_project 1 37372337 37384700 + MGP_CBAJ_P0019011 Arid5a protein_coding protein_coding MGP_CBAJ_T0019012.1 MGP_CBAJ_G0015663.1 mouse_genomes_project 1 37372337 37388329 + MGP_CBAJ_P0019012 Arid5a protein_coding protein_coding MGP_CBAJ_T0019013.1 MGP_CBAJ_G0015663.1 mouse_genomes_project 1 37372337 37387784 + MGP_CBAJ_P0019013 Arid5a protein_coding protein_coding MGP_CBAJ_T0019014.1 MGP_CBAJ_G0015663.1 mouse_genomes_project 1 37372341 37380029 + Arid5a protein_coding retained_intron MGP_CBAJ_T0019015.1 MGP_CBAJ_G0015663.1 mouse_genomes_project 1 37372362 37383836 + Arid5a protein_coding retained_intron MGP_CBAJ_T0019016.1 MGP_CBAJ_G0015663.1 mouse_genomes_project 1 37372416 37387784 + MGP_CBAJ_P0019016 Arid5a protein_coding protein_coding MGP_CBAJ_T0019017.1 MGP_CBAJ_G0015663.1 mouse_genomes_project 1 37383249 37385394 + Arid5a protein_coding retained_intron MGP_CBAJ_T0019018.1 MGP_CBAJ_G0015663.1 mouse_genomes_project 1 37384284 37385390 + Arid5a protein_coding retained_intron MGP_CBAJ_T0005736.1 MGP_CBAJ_G0004804.1 mouse_genomes_project 1 96553051 96554845 + Gm29336 lincRNA lincRNA MGP_CBAJ_T0021779.1 MGP_CBAJ_G0016217.1 mouse_genomes_project 1 145922044 146105381 - MGP_CBAJ_P0021779 Nfasc protein_coding protein_coding MGP_CBAJ_T0021780.1 MGP_CBAJ_G0016217.1 mouse_genomes_project 1 145922130 146038776 - MGP_CBAJ_P0021780 Nfasc protein_coding protein_coding MGP_CBAJ_T0021781.1 MGP_CBAJ_G0016217.1 mouse_genomes_project 1 145922133 145990665 - MGP_CBAJ_P0021781 Nfasc protein_coding protein_coding MGP_CBAJ_T0021782.1 MGP_CBAJ_G0016217.1 mouse_genomes_project 1 145928039 145938827 - Nfasc protein_coding processed_transcript MGP_CBAJ_T0021783.1 MGP_CBAJ_G0016217.1 mouse_genomes_project 1 145951513 146105415 - MGP_CBAJ_P0021783 Nfasc protein_coding protein_coding MGP_CBAJ_T0021784.1 MGP_CBAJ_G0016217.1 mouse_genomes_project 1 145953312 145956838 - Nfasc protein_coding retained_intron MGP_CBAJ_T0021785.1 MGP_CBAJ_G0016217.1 mouse_genomes_project 1 145971049 145976175 - Nfasc protein_coding retained_intron MGP_CBAJ_T0021786.1 MGP_CBAJ_G0016217.1 mouse_genomes_project 1 146020995 146105396 - Nfasc protein_coding processed_transcript MGP_CBAJ_T0011967.1 MGP_CBAJ_G0010079.1 mouse_genomes_project 1 77848384 77853212 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099732.1 MGP_CBAJ_G0037987.1 mouse_genomes_project 1 8781451 8781542 + Gm22963 snoRNA snoRNA MGP_CBAJ_T0002740.1 MGP_CBAJ_G0002602.1 mouse_genomes_project 1 62229633 62296006 - Gm15759 antisense antisense MGP_CBAJ_T0021218.1 MGP_CBAJ_G0016089.1 mouse_genomes_project 1 102285422 102294839 - MGP_CBAJ_P0021218 Dtymk protein_coding protein_coding MGP_CBAJ_T0021219.1 MGP_CBAJ_G0016089.1 mouse_genomes_project 1 102285570 102291905 - MGP_CBAJ_P0021219 Dtymk protein_coding protein_coding MGP_CBAJ_T0021220.1 MGP_CBAJ_G0016089.1 mouse_genomes_project 1 102291283 102292265 - Dtymk protein_coding processed_transcript MGP_CBAJ_T0021221.1 MGP_CBAJ_G0016089.1 mouse_genomes_project 1 102292986 102294811 - MGP_CBAJ_P0021221 Dtymk protein_coding protein_coding MGP_CBAJ_T0000407.1 MGP_CBAJ_G0000349.1 mouse_genomes_project 1 35044616 35046841 + TEC TEC MGP_CBAJ_T0000499.1 MGP_CBAJ_G0000441.1 mouse_genomes_project 1 87467178 87469006 - TEC TEC MGP_CBAJ_T0000478.1 MGP_CBAJ_G0000420.1 mouse_genomes_project 1 75275974 75277860 + TEC TEC MGP_CBAJ_T0021857.1 MGP_CBAJ_G0016234.1 mouse_genomes_project 1 147198183 147209062 - MGP_CBAJ_P0021857 Lax1 protein_coding protein_coding MGP_CBAJ_T0021858.1 MGP_CBAJ_G0016234.1 mouse_genomes_project 1 147199553 147209040 - MGP_CBAJ_P0021858 Lax1 protein_coding protein_coding MGP_CBAJ_T0098480.1 MGP_CBAJ_G0036740.1 mouse_genomes_project 1 44639398 44700657 + Gm20646 sense_overlapping sense_overlapping MGP_CBAJ_T0098481.1 MGP_CBAJ_G0036740.1 mouse_genomes_project 1 44639398 44696834 + Gm20646 sense_overlapping sense_overlapping MGP_CBAJ_T0023853.1 MGP_CBAJ_G0016666.1 mouse_genomes_project 1 210949138 211002105 - MGP_CBAJ_P0023853 Prox1 protein_coding protein_coding MGP_CBAJ_T0023854.1 MGP_CBAJ_G0016666.1 mouse_genomes_project 1 210953553 211000788 - MGP_CBAJ_P0023854 Prox1 protein_coding protein_coding MGP_CBAJ_T0023855.1 MGP_CBAJ_G0016666.1 mouse_genomes_project 1 210954110 211002071 - MGP_CBAJ_P0023855 Prox1 protein_coding protein_coding MGP_CBAJ_T0012003.1 MGP_CBAJ_G0010115.1 mouse_genomes_project 1 97223658 97224458 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000507.1 MGP_CBAJ_G0000449.1 mouse_genomes_project 1 91261255 91262891 - TEC TEC MGP_CBAJ_T0023008.1 MGP_CBAJ_G0016464.1 mouse_genomes_project 1 187929657 188080008 - MGP_CBAJ_P0023008 Ddr2 protein_coding protein_coding MGP_CBAJ_T0023009.1 MGP_CBAJ_G0016464.1 mouse_genomes_project 1 187929658 188057840 - MGP_CBAJ_P0023009 Ddr2 protein_coding protein_coding MGP_CBAJ_T0023010.1 MGP_CBAJ_G0016464.1 mouse_genomes_project 1 187935179 188079948 - MGP_CBAJ_P0023010 Ddr2 protein_coding protein_coding MGP_CBAJ_T0023011.1 MGP_CBAJ_G0016464.1 mouse_genomes_project 1 187968601 188080176 - MGP_CBAJ_P0023011 Ddr2 protein_coding protein_coding MGP_CBAJ_T0023012.1 MGP_CBAJ_G0016464.1 mouse_genomes_project 1 188004691 188080209 - Ddr2 protein_coding retained_intron MGP_CBAJ_T0023013.1 MGP_CBAJ_G0016464.1 mouse_genomes_project 1 188052407 188066185 - Ddr2 protein_coding processed_transcript MGP_CBAJ_T0000624.1 MGP_CBAJ_G0000564.1 mouse_genomes_project 1 152702150 152705808 - TEC TEC MGP_CBAJ_T0020715.1 MGP_CBAJ_G0015981.1 mouse_genomes_project 1 93392523 93400377 + Spata3 protein_coding processed_transcript MGP_CBAJ_T0020716.1 MGP_CBAJ_G0015981.1 mouse_genomes_project 1 93394400 93405040 + Spata3 protein_coding processed_transcript MGP_CBAJ_T0020717.1 MGP_CBAJ_G0015981.1 mouse_genomes_project 1 93397649 93405750 + MGP_CBAJ_P0020717 Spata3 protein_coding protein_coding MGP_CBAJ_T0020718.1 MGP_CBAJ_G0015981.1 mouse_genomes_project 1 93397650 93400374 + MGP_CBAJ_P0020718 Spata3 protein_coding protein_coding MGP_CBAJ_T0020719.1 MGP_CBAJ_G0015981.1 mouse_genomes_project 1 93397653 93400376 + MGP_CBAJ_P0020719 Spata3 protein_coding protein_coding MGP_CBAJ_T0020720.1 MGP_CBAJ_G0015981.1 mouse_genomes_project 1 93397653 93405750 + MGP_CBAJ_P0020720 Spata3 protein_coding protein_coding MGP_CBAJ_T0020721.1 MGP_CBAJ_G0015981.1 mouse_genomes_project 1 93397653 93402886 + MGP_CBAJ_P0020721 Spata3 protein_coding protein_coding MGP_CBAJ_T0020722.1 MGP_CBAJ_G0015981.1 mouse_genomes_project 1 93397660 93405713 + MGP_CBAJ_P0020722 Spata3 protein_coding protein_coding MGP_CBAJ_T0020723.1 MGP_CBAJ_G0015981.1 mouse_genomes_project 1 93397667 93405054 + MGP_CBAJ_P0020723 Spata3 protein_coding protein_coding MGP_CBAJ_T0020724.1 MGP_CBAJ_G0015981.1 mouse_genomes_project 1 93397668 93400377 + MGP_CBAJ_P0020724 Spata3 protein_coding protein_coding MGP_CBAJ_T0020725.1 MGP_CBAJ_G0015981.1 mouse_genomes_project 1 93397812 93405056 + MGP_CBAJ_P0020725 Spata3 protein_coding protein_coding MGP_CBAJ_T0019542.1 MGP_CBAJ_G0015764.1 mouse_genomes_project 1 57192618 57222277 - MGP_CBAJ_P0019542 Stk17b protein_coding protein_coding MGP_CBAJ_T0019543.1 MGP_CBAJ_G0015764.1 mouse_genomes_project 1 57197739 57199860 - Stk17b protein_coding retained_intron MGP_CBAJ_T0005952.1 MGP_CBAJ_G0004976.1 mouse_genomes_project 1 206033265 206047867 + Gm38093 lincRNA lincRNA MGP_CBAJ_T0011920.1 MGP_CBAJ_G0010032.1 mouse_genomes_project 1 64258690 64260752 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011994.1 MGP_CBAJ_G0010106.1 mouse_genomes_project 1 93739061 93739896 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012079.1 MGP_CBAJ_G0010191.1 mouse_genomes_project 1 132802654 132802864 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000517.1 MGP_CBAJ_G0000459.1 mouse_genomes_project 1 94337649 94340433 + TEC TEC MGP_CBAJ_T0021236.1 MGP_CBAJ_G0016096.1 mouse_genomes_project 1 105816248 105878213 - MGP_CBAJ_P0021236 Slco4c1 protein_coding protein_coding MGP_CBAJ_T0020640.1 MGP_CBAJ_G0015965.1 mouse_genomes_project 1 90125717 90128118 + MGP_CBAJ_P0020640 Ccl20 protein_coding protein_coding MGP_CBAJ_T0020641.1 MGP_CBAJ_G0015965.1 mouse_genomes_project 1 90125725 90128119 + MGP_CBAJ_P0020641 Ccl20 protein_coding protein_coding MGP_CBAJ_T0020642.1 MGP_CBAJ_G0015965.1 mouse_genomes_project 1 90125744 90128119 + MGP_CBAJ_P0020642 Ccl20 protein_coding protein_coding MGP_CBAJ_T0099808.1 MGP_CBAJ_G0038063.1 mouse_genomes_project 1 177823118 177823239 - Gm24988 snoRNA snoRNA MGP_CBAJ_T0011790.1 MGP_CBAJ_G0009902.1 mouse_genomes_project 1 20434624 20434820 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000377.1 MGP_CBAJ_G0000320.1 mouse_genomes_project 1 24896400 24899506 - TEC TEC MGP_CBAJ_T0000746.1 MGP_CBAJ_G0000684.1 mouse_genomes_project 1 206437839 206438032 - TEC TEC MGP_CBAJ_T0101459.1 MGP_CBAJ_G0039491.1 mouse_genomes_project 1 95881518 95881912 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0021613.1 MGP_CBAJ_G0016179.1 mouse_genomes_project 1 143861619 143890953 - MGP_CBAJ_P0021613 protein_coding protein_coding MGP_CBAJ_T0021614.1 MGP_CBAJ_G0016179.1 mouse_genomes_project 1 143861627 143864669 - protein_coding retained_intron MGP_CBAJ_T0021615.1 MGP_CBAJ_G0016179.1 mouse_genomes_project 1 143862715 143909524 - MGP_CBAJ_P0021615 protein_coding protein_coding MGP_CBAJ_T0021616.1 MGP_CBAJ_G0016179.1 mouse_genomes_project 1 143863452 143890954 - MGP_CBAJ_P0021616 protein_coding protein_coding MGP_CBAJ_T0021617.1 MGP_CBAJ_G0016179.1 mouse_genomes_project 1 143863452 143890954 - MGP_CBAJ_P0021617 protein_coding protein_coding MGP_CBAJ_T0021618.1 MGP_CBAJ_G0016179.1 mouse_genomes_project 1 143871667 143890953 - MGP_CBAJ_P0021618 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021619.1 MGP_CBAJ_G0016179.1 mouse_genomes_project 1 143871667 143890953 - MGP_CBAJ_P0021619 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021620.1 MGP_CBAJ_G0016179.1 mouse_genomes_project 1 143871667 143890953 - MGP_CBAJ_P0021620 protein_coding protein_coding MGP_CBAJ_T0021621.1 MGP_CBAJ_G0016179.1 mouse_genomes_project 1 143871855 143892166 - MGP_CBAJ_P0021621 protein_coding protein_coding MGP_CBAJ_T0021622.1 MGP_CBAJ_G0016179.1 mouse_genomes_project 1 143883924 143893592 - MGP_CBAJ_P0021622 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018691.1 MGP_CBAJ_G0015593.1 mouse_genomes_project 1 13591175 14073549 + MGP_CBAJ_P0018691 Kcnb2 protein_coding protein_coding MGP_CBAJ_T0018692.1 MGP_CBAJ_G0015593.1 mouse_genomes_project 1 13617261 14087154 + MGP_CBAJ_P0018692 Kcnb2 protein_coding protein_coding MGP_CBAJ_T0005846.1 MGP_CBAJ_G0004896.1 mouse_genomes_project 1 164985753 165025672 - Gm29398 lincRNA lincRNA MGP_CBAJ_T0005847.1 MGP_CBAJ_G0004896.1 mouse_genomes_project 1 164996154 165025671 - Gm29398 lincRNA lincRNA MGP_CBAJ_T0022196.1 MGP_CBAJ_G0016306.1 mouse_genomes_project 1 158570704 158613287 + MGP_CBAJ_P0022196 Uchl5 protein_coding protein_coding MGP_CBAJ_T0022197.1 MGP_CBAJ_G0016306.1 mouse_genomes_project 1 158570708 158577668 + Uchl5 protein_coding retained_intron MGP_CBAJ_T0022198.1 MGP_CBAJ_G0016306.1 mouse_genomes_project 1 158570713 158613287 + MGP_CBAJ_P0022198 Uchl5 protein_coding protein_coding MGP_CBAJ_T0022199.1 MGP_CBAJ_G0016306.1 mouse_genomes_project 1 158570737 158579751 + Uchl5 protein_coding retained_intron MGP_CBAJ_T0022200.1 MGP_CBAJ_G0016306.1 mouse_genomes_project 1 158570753 158597195 + MGP_CBAJ_P0022200 Uchl5 protein_coding protein_coding MGP_CBAJ_T0022201.1 MGP_CBAJ_G0016306.1 mouse_genomes_project 1 158577048 158588156 + Uchl5 protein_coding retained_intron MGP_CBAJ_T0022202.1 MGP_CBAJ_G0016306.1 mouse_genomes_project 1 158588094 158612958 + MGP_CBAJ_P0022202 Uchl5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0000521.1 MGP_CBAJ_G0000463.1 mouse_genomes_project 1 94522617 94523249 + TEC TEC MGP_CBAJ_T0097876.1 MGP_CBAJ_G0036149.1 mouse_genomes_project 1 130344243 130344360 - Gm22094 rRNA rRNA MGP_CBAJ_T0099735.1 MGP_CBAJ_G0037990.1 mouse_genomes_project 1 13302705 13302825 - Gm26345 snoRNA snoRNA MGP_CBAJ_T0018524.1 MGP_CBAJ_G0015566.1 mouse_genomes_project 1 4596025 4684948 + MGP_CBAJ_P0018524 Pcmtd1 protein_coding protein_coding MGP_CBAJ_T0018525.1 MGP_CBAJ_G0015566.1 mouse_genomes_project 1 4596075 4672240 + Pcmtd1 protein_coding processed_transcript MGP_CBAJ_T0018526.1 MGP_CBAJ_G0015566.1 mouse_genomes_project 1 4596137 4683440 + Pcmtd1 protein_coding processed_transcript MGP_CBAJ_T0018527.1 MGP_CBAJ_G0015566.1 mouse_genomes_project 1 4659028 4681394 + MGP_CBAJ_P0018527 Pcmtd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018528.1 MGP_CBAJ_G0015566.1 mouse_genomes_project 1 4666260 4674709 + Pcmtd1 protein_coding retained_intron MGP_CBAJ_T0018529.1 MGP_CBAJ_G0015566.1 mouse_genomes_project 1 4671422 4683936 + Pcmtd1 protein_coding retained_intron MGP_CBAJ_T0018530.1 MGP_CBAJ_G0015566.1 mouse_genomes_project 1 4671894 4683977 + Pcmtd1 protein_coding retained_intron MGP_CBAJ_T0023631.1 MGP_CBAJ_G0016620.1 mouse_genomes_project 1 200913246 200965827 - MGP_CBAJ_P0023631 Wdr26 protein_coding protein_coding MGP_CBAJ_T0023632.1 MGP_CBAJ_G0016620.1 mouse_genomes_project 1 200913250 200965735 - MGP_CBAJ_P0023632 Wdr26 protein_coding protein_coding MGP_CBAJ_T0023633.1 MGP_CBAJ_G0016620.1 mouse_genomes_project 1 200917086 200965701 - MGP_CBAJ_P0023633 Wdr26 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023634.1 MGP_CBAJ_G0016620.1 mouse_genomes_project 1 200917664 200924790 - MGP_CBAJ_P0023634 Wdr26 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023635.1 MGP_CBAJ_G0016620.1 mouse_genomes_project 1 200920398 200924263 - MGP_CBAJ_P0023635 Wdr26 protein_coding protein_coding MGP_CBAJ_T0023636.1 MGP_CBAJ_G0016620.1 mouse_genomes_project 1 200922298 200924920 - Wdr26 protein_coding processed_transcript MGP_CBAJ_T0023637.1 MGP_CBAJ_G0016620.1 mouse_genomes_project 1 200929096 200935261 - Wdr26 protein_coding retained_intron MGP_CBAJ_T0023638.1 MGP_CBAJ_G0016620.1 mouse_genomes_project 1 200948284 200952404 - Wdr26 protein_coding retained_intron MGP_CBAJ_T0021682.1 MGP_CBAJ_G0016196.1 mouse_genomes_project 1 144849353 144866210 + MGP_CBAJ_P0021682 Avpr1b protein_coding protein_coding MGP_CBAJ_T0021683.1 MGP_CBAJ_G0016196.1 mouse_genomes_project 1 144849844 144863964 + MGP_CBAJ_P0021683 Avpr1b protein_coding protein_coding MGP_CBAJ_T0020570.1 MGP_CBAJ_G0015949.1 mouse_genomes_project 1 86383049 86388477 + MGP_CBAJ_P0020570 Mrpl44 protein_coding protein_coding MGP_CBAJ_T0020571.1 MGP_CBAJ_G0015949.1 mouse_genomes_project 1 86383147 86385578 + Mrpl44 protein_coding retained_intron MGP_CBAJ_T0009371.1 MGP_CBAJ_G0007509.1 mouse_genomes_project 1 56771089 56771214 - Gm25240 miRNA miRNA MGP_CBAJ_T0011973.1 MGP_CBAJ_G0010085.1 mouse_genomes_project 1 81787317 81788121 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002905.1 MGP_CBAJ_G0002728.1 mouse_genomes_project 1 205563060 205564677 + 2010103J01Rik antisense antisense MGP_CBAJ_T0100995.1 MGP_CBAJ_G0039246.1 mouse_genomes_project 1 85515049 85515198 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0022261.1 MGP_CBAJ_G0016318.1 mouse_genomes_project 1 166142031 166157387 - MGP_CBAJ_P0022261 Prg4 protein_coding protein_coding MGP_CBAJ_T0022262.1 MGP_CBAJ_G0016318.1 mouse_genomes_project 1 166142031 166157387 - MGP_CBAJ_P0022262 Prg4 protein_coding protein_coding MGP_CBAJ_T0022263.1 MGP_CBAJ_G0016318.1 mouse_genomes_project 1 166142031 166157387 - MGP_CBAJ_P0022263 Prg4 protein_coding protein_coding MGP_CBAJ_T0022264.1 MGP_CBAJ_G0016318.1 mouse_genomes_project 1 166142031 166157387 - MGP_CBAJ_P0022264 Prg4 protein_coding protein_coding MGP_CBAJ_T0022265.1 MGP_CBAJ_G0016318.1 mouse_genomes_project 1 166142435 166157954 - MGP_CBAJ_P0022265 Prg4 protein_coding protein_coding MGP_CBAJ_T0022266.1 MGP_CBAJ_G0016318.1 mouse_genomes_project 1 166147803 166157954 - MGP_CBAJ_P0022266 Prg4 protein_coding protein_coding MGP_CBAJ_T0022267.1 MGP_CBAJ_G0016318.1 mouse_genomes_project 1 166149997 166157954 - MGP_CBAJ_P0022267 Prg4 protein_coding protein_coding MGP_CBAJ_T0021890.1 MGP_CBAJ_G0016243.1 mouse_genomes_project 1 147812624 147854512 - MGP_CBAJ_P0021890 Adora1 protein_coding protein_coding MGP_CBAJ_T0021891.1 MGP_CBAJ_G0016243.1 mouse_genomes_project 1 147812626 147855365 - MGP_CBAJ_P0021891 Adora1 protein_coding protein_coding MGP_CBAJ_T0021892.1 MGP_CBAJ_G0016243.1 mouse_genomes_project 1 147814750 147855331 - MGP_CBAJ_P0021892 Adora1 protein_coding protein_coding MGP_CBAJ_T0021893.1 MGP_CBAJ_G0016243.1 mouse_genomes_project 1 147816798 147855298 - MGP_CBAJ_P0021893 Adora1 protein_coding protein_coding MGP_CBAJ_T0000519.1 MGP_CBAJ_G0000461.1 mouse_genomes_project 1 94406158 94407706 + TEC TEC MGP_CBAJ_T0011822.1 MGP_CBAJ_G0009934.1 mouse_genomes_project 1 31724947 31725587 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099802.1 MGP_CBAJ_G0038057.1 mouse_genomes_project 1 160236934 160237061 - Gm25460 snoRNA snoRNA MGP_CBAJ_T0098530.1 MGP_CBAJ_G0036785.1 mouse_genomes_project 1 61367102 61367259 + Gm24014 snRNA snRNA MGP_CBAJ_T0011898.1 MGP_CBAJ_G0010010.1 mouse_genomes_project 1 55914948 55915359 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005629.1 MGP_CBAJ_G0004723.1 mouse_genomes_project 1 45806601 45807213 + Gm29157 lincRNA lincRNA MGP_CBAJ_T0099796.1 MGP_CBAJ_G0038051.1 mouse_genomes_project 1 147114394 147114527 + Gm23939 snoRNA snoRNA MGP_CBAJ_T0000619.1 MGP_CBAJ_G0000559.1 mouse_genomes_project 1 152005721 152010957 + TEC TEC MGP_CBAJ_T0019372.1 MGP_CBAJ_G0015733.1 mouse_genomes_project 1 46302405 46320897 - MGP_CBAJ_P0019372 Mettl21e protein_coding protein_coding MGP_CBAJ_T0019373.1 MGP_CBAJ_G0015733.1 mouse_genomes_project 1 46304762 46320849 - Mettl21e protein_coding retained_intron MGP_CBAJ_T0023884.1 MGP_CBAJ_G0016671.1 mouse_genomes_project 1 211931316 211937408 + MGP_CBAJ_P0023884 Spata45 protein_coding protein_coding MGP_CBAJ_T0023885.1 MGP_CBAJ_G0016671.1 mouse_genomes_project 1 211931496 211937415 + MGP_CBAJ_P0023885 Spata45 protein_coding protein_coding MGP_CBAJ_T0020152.1 MGP_CBAJ_G0015877.1 mouse_genomes_project 1 78560474 78563886 + MGP_CBAJ_P0020152 Rpl37a protein_coding protein_coding MGP_CBAJ_T0020153.1 MGP_CBAJ_G0015877.1 mouse_genomes_project 1 78560535 78562780 + MGP_CBAJ_P0020153 Rpl37a protein_coding unknown_likely_coding MGP_CBAJ_T0099762.1 MGP_CBAJ_G0038017.1 mouse_genomes_project 1 63972535 63972616 + Gm26287 snoRNA snoRNA MGP_CBAJ_T0009404.1 MGP_CBAJ_G0007542.1 mouse_genomes_project 1 105176135 105176224 - Gm24586 miRNA miRNA MGP_CBAJ_T0022303.1 MGP_CBAJ_G0016324.1 mouse_genomes_project 1 167395581 167491214 + MGP_CBAJ_P0022303 Fam129a protein_coding protein_coding MGP_CBAJ_T0022304.1 MGP_CBAJ_G0016324.1 mouse_genomes_project 1 167395768 167578597 + MGP_CBAJ_P0022304 Fam129a protein_coding protein_coding MGP_CBAJ_T0022305.1 MGP_CBAJ_G0016324.1 mouse_genomes_project 1 167395847 167576000 + MGP_CBAJ_P0022305 Fam129a protein_coding nonsense_mediated_decay MGP_CBAJ_T0022306.1 MGP_CBAJ_G0016324.1 mouse_genomes_project 1 167395891 167544565 + MGP_CBAJ_P0022306 Fam129a protein_coding protein_coding MGP_CBAJ_T0022307.1 MGP_CBAJ_G0016324.1 mouse_genomes_project 1 167524720 167576000 + Fam129a protein_coding processed_transcript MGP_CBAJ_T0002687.1 MGP_CBAJ_G0002561.1 mouse_genomes_project 1 13024472 13048369 + Gm9947 antisense antisense MGP_CBAJ_T0002688.1 MGP_CBAJ_G0002561.1 mouse_genomes_project 1 13026989 13029909 + Gm9947 antisense antisense MGP_CBAJ_T0012051.1 MGP_CBAJ_G0010163.1 mouse_genomes_project 1 121193149 121193971 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011137.1 MGP_CBAJ_G0009275.1 mouse_genomes_project 1 212121832 212121940 + Gm24748 misc_RNA misc_RNA MGP_CBAJ_T0012129.1 MGP_CBAJ_G0010241.1 mouse_genomes_project 1 160128921 160129917 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002921.1 MGP_CBAJ_G0002742.1 mouse_genomes_project 1 211982787 211983645 - Gm38188 antisense antisense MGP_CBAJ_T0019776.1 MGP_CBAJ_G0015806.1 mouse_genomes_project 1 63364168 63453475 - MGP_CBAJ_P0019776 Als2 protein_coding protein_coding MGP_CBAJ_T0019777.1 MGP_CBAJ_G0015806.1 mouse_genomes_project 1 63365300 63453337 - MGP_CBAJ_P0019777 Als2 protein_coding protein_coding MGP_CBAJ_T0019778.1 MGP_CBAJ_G0015806.1 mouse_genomes_project 1 63402108 63453475 - Als2 protein_coding retained_intron MGP_CBAJ_T0019779.1 MGP_CBAJ_G0015806.1 mouse_genomes_project 1 63428054 63453470 - MGP_CBAJ_P0019779 Als2 protein_coding protein_coding MGP_CBAJ_T0019780.1 MGP_CBAJ_G0015806.1 mouse_genomes_project 1 63428747 63431513 - Als2 protein_coding retained_intron MGP_CBAJ_T0000481.1 MGP_CBAJ_G0000423.1 mouse_genomes_project 1 77565503 77569024 - TEC TEC MGP_CBAJ_T0101481.1 MGP_CBAJ_G0039513.1 mouse_genomes_project 1 117570186 117587262 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0000552.1 MGP_CBAJ_G0000494.1 mouse_genomes_project 1 121627465 121630383 - TEC TEC MGP_CBAJ_T0022591.1 MGP_CBAJ_G0016377.1 mouse_genomes_project 1 175392711 175673472 - MGP_CBAJ_P0022591 Pappa2 protein_coding protein_coding MGP_CBAJ_T0022592.1 MGP_CBAJ_G0016377.1 mouse_genomes_project 1 175452312 175506876 - MGP_CBAJ_P0022592 Pappa2 protein_coding protein_coding MGP_CBAJ_T0022593.1 MGP_CBAJ_G0016377.1 mouse_genomes_project 1 175506680 175541662 - Pappa2 protein_coding retained_intron MGP_CBAJ_T0022594.1 MGP_CBAJ_G0016377.1 mouse_genomes_project 1 175524235 175534138 - Pappa2 protein_coding processed_transcript MGP_CBAJ_T0022595.1 MGP_CBAJ_G0016377.1 mouse_genomes_project 1 175673180 175675445 - Pappa2 protein_coding processed_transcript MGP_CBAJ_T0022596.1 MGP_CBAJ_G0016377.1 mouse_genomes_project 1 175673231 175695536 - Pappa2 protein_coding processed_transcript MGP_CBAJ_T0099797.1 MGP_CBAJ_G0038052.1 mouse_genomes_project 1 148159976 148160102 + Gm25612 snoRNA snoRNA MGP_CBAJ_T0022680.1 MGP_CBAJ_G0016390.1 mouse_genomes_project 1 178083880 178130399 - Klhl20 protein_coding retained_intron MGP_CBAJ_T0022681.1 MGP_CBAJ_G0016390.1 mouse_genomes_project 1 178083880 178130399 - MGP_CBAJ_P0022681 Klhl20 protein_coding protein_coding MGP_CBAJ_T0022682.1 MGP_CBAJ_G0016390.1 mouse_genomes_project 1 178083885 178130316 - MGP_CBAJ_P0022682 Klhl20 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022683.1 MGP_CBAJ_G0016390.1 mouse_genomes_project 1 178083903 178091152 - MGP_CBAJ_P0022683 Klhl20 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022684.1 MGP_CBAJ_G0016390.1 mouse_genomes_project 1 178091971 178130399 - Klhl20 protein_coding retained_intron MGP_CBAJ_T0022685.1 MGP_CBAJ_G0016390.1 mouse_genomes_project 1 178097799 178102012 - Klhl20 protein_coding retained_intron MGP_CBAJ_T0022686.1 MGP_CBAJ_G0016390.1 mouse_genomes_project 1 178104537 178130330 - Klhl20 protein_coding retained_intron MGP_CBAJ_T0002716.1 MGP_CBAJ_G0002583.1 mouse_genomes_project 1 39556050 39567594 + Gm16150 antisense antisense MGP_CBAJ_T0002717.1 MGP_CBAJ_G0002583.1 mouse_genomes_project 1 39561700 39568657 + Gm16150 antisense antisense MGP_CBAJ_T0009362.1 MGP_CBAJ_G0007500.1 mouse_genomes_project 1 37415895 37415972 - Mir6898 miRNA miRNA MGP_CBAJ_T0020142.1 MGP_CBAJ_G0015875.1 mouse_genomes_project 1 78407766 78452523 + Smarcal1 protein_coding retained_intron MGP_CBAJ_T0020143.1 MGP_CBAJ_G0015875.1 mouse_genomes_project 1 78407766 78423661 + Smarcal1 protein_coding retained_intron MGP_CBAJ_T0020144.1 MGP_CBAJ_G0015875.1 mouse_genomes_project 1 78407766 78420532 + Smarcal1 protein_coding retained_intron MGP_CBAJ_T0020145.1 MGP_CBAJ_G0015875.1 mouse_genomes_project 1 78407766 78458739 + MGP_CBAJ_P0020145 Smarcal1 protein_coding protein_coding MGP_CBAJ_T0020146.1 MGP_CBAJ_G0015875.1 mouse_genomes_project 1 78407766 78410507 + MGP_CBAJ_P0020146 Smarcal1 protein_coding protein_coding MGP_CBAJ_T0020147.1 MGP_CBAJ_G0015875.1 mouse_genomes_project 1 78407766 78420092 + MGP_CBAJ_P0020147 Smarcal1 protein_coding protein_coding MGP_CBAJ_T0020148.1 MGP_CBAJ_G0015875.1 mouse_genomes_project 1 78408130 78458739 + MGP_CBAJ_P0020148 Smarcal1 protein_coding protein_coding MGP_CBAJ_T0020149.1 MGP_CBAJ_G0015875.1 mouse_genomes_project 1 78410153 78452523 + Smarcal1 protein_coding retained_intron MGP_CBAJ_T0020150.1 MGP_CBAJ_G0015875.1 mouse_genomes_project 1 78440785 78453906 + Smarcal1 protein_coding retained_intron MGP_CBAJ_T0005871.1 MGP_CBAJ_G0004915.1 mouse_genomes_project 1 176917011 176920195 - 4930562F07Rik lincRNA lincRNA MGP_CBAJ_T0005872.1 MGP_CBAJ_G0004915.1 mouse_genomes_project 1 176917011 176920262 - 4930562F07Rik lincRNA lincRNA MGP_CBAJ_T0005873.1 MGP_CBAJ_G0004915.1 mouse_genomes_project 1 176917246 176920219 - 4930562F07Rik lincRNA lincRNA MGP_CBAJ_T0021419.1 MGP_CBAJ_G0016137.1 mouse_genomes_project 1 131278389 131312796 - MGP_CBAJ_P0021419 Ralb protein_coding protein_coding MGP_CBAJ_T0021420.1 MGP_CBAJ_G0016137.1 mouse_genomes_project 1 131280229 131286164 - MGP_CBAJ_P0021420 Ralb protein_coding protein_coding MGP_CBAJ_T0021421.1 MGP_CBAJ_G0016137.1 mouse_genomes_project 1 131289217 131312796 - Ralb protein_coding retained_intron MGP_CBAJ_T0011922.1 MGP_CBAJ_G0010034.1 mouse_genomes_project 1 64667310 64667537 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0022040.1 MGP_CBAJ_G0016273.1 mouse_genomes_project 1 149692620 149748082 - MGP_CBAJ_P0022040 Pkp1 protein_coding protein_coding MGP_CBAJ_T0022041.1 MGP_CBAJ_G0016273.1 mouse_genomes_project 1 149694175 149747995 - MGP_CBAJ_P0022041 Pkp1 protein_coding protein_coding MGP_CBAJ_T0022042.1 MGP_CBAJ_G0016273.1 mouse_genomes_project 1 149694591 149748017 - MGP_CBAJ_P0022042 Pkp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022043.1 MGP_CBAJ_G0016273.1 mouse_genomes_project 1 149698543 149699501 - Pkp1 protein_coding retained_intron MGP_CBAJ_T0000687.1 MGP_CBAJ_G0000627.1 mouse_genomes_project 1 177976172 177977023 - TEC TEC MGP_CBAJ_T0019786.1 MGP_CBAJ_G0015809.1 mouse_genomes_project 1 63762910 63888751 + MGP_CBAJ_P0019786 Gm973 protein_coding protein_coding MGP_CBAJ_T0019787.1 MGP_CBAJ_G0015809.1 mouse_genomes_project 1 63773504 63776182 + MGP_CBAJ_P0019787 Gm973 protein_coding protein_coding MGP_CBAJ_T0019788.1 MGP_CBAJ_G0015809.1 mouse_genomes_project 1 63773868 63851337 + MGP_CBAJ_P0019788 Gm973 protein_coding unknown_likely_coding MGP_CBAJ_T0019789.1 MGP_CBAJ_G0015809.1 mouse_genomes_project 1 63796019 63809934 + Gm973 protein_coding retained_intron MGP_CBAJ_T0019790.1 MGP_CBAJ_G0015809.1 mouse_genomes_project 1 63802486 63814790 + Gm973 protein_coding processed_transcript MGP_CBAJ_T0019791.1 MGP_CBAJ_G0015809.1 mouse_genomes_project 1 63811647 63818631 + Gm973 protein_coding retained_intron MGP_CBAJ_T0019793.1 MGP_CBAJ_G0015809.1 mouse_genomes_project 1 63861023 63882503 + Gm973 protein_coding processed_transcript MGP_CBAJ_T0019794.1 MGP_CBAJ_G0015809.1 mouse_genomes_project 1 63861057 63884545 + Gm973 protein_coding processed_transcript MGP_CBAJ_T0019795.1 MGP_CBAJ_G0015809.1 mouse_genomes_project 1 63873655 63882485 + Gm973 protein_coding processed_transcript MGP_CBAJ_T0019796.1 MGP_CBAJ_G0015809.1 mouse_genomes_project 1 63884564 63890659 + MGP_CBAJ_P0019796 Gm973 protein_coding protein_coding MGP_CBAJ_T0005779.1 MGP_CBAJ_G0004842.1 mouse_genomes_project 1 118255437 118288259 + D830032E09Rik lincRNA lincRNA MGP_CBAJ_T0005780.1 MGP_CBAJ_G0004842.1 mouse_genomes_project 1 118255463 118288272 + D830032E09Rik lincRNA lincRNA MGP_CBAJ_T0005781.1 MGP_CBAJ_G0004842.1 mouse_genomes_project 1 118271713 118376577 + D830032E09Rik lincRNA lincRNA MGP_CBAJ_T0019725.1 MGP_CBAJ_G0015798.1 mouse_genomes_project 1 62725795 62777403 - MGP_CBAJ_P0019725 Als2cr12 protein_coding protein_coding MGP_CBAJ_T0019726.1 MGP_CBAJ_G0015798.1 mouse_genomes_project 1 62725795 63058589 - MGP_CBAJ_P0019726 Als2cr12 protein_coding protein_coding MGP_CBAJ_T0019727.1 MGP_CBAJ_G0015798.1 mouse_genomes_project 1 62726038 62777403 - MGP_CBAJ_P0019727 Als2cr12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0005589.1 MGP_CBAJ_G0004700.1 mouse_genomes_project 1 35315103 35323547 - 4930568A12Rik lincRNA lincRNA MGP_CBAJ_T0005590.1 MGP_CBAJ_G0004700.1 mouse_genomes_project 1 35318917 35323869 - 4930568A12Rik lincRNA lincRNA MGP_CBAJ_T0022116.1 MGP_CBAJ_G0016288.1 mouse_genomes_project 1 152390706 152406434 + MGP_CBAJ_P0022116 Atp6v1g3 protein_coding protein_coding MGP_CBAJ_T0022550.1 MGP_CBAJ_G0016370.1 mouse_genomes_project 1 173288389 173314080 + MGP_CBAJ_P0022550 Angptl1 protein_coding protein_coding MGP_CBAJ_T0022551.1 MGP_CBAJ_G0016370.1 mouse_genomes_project 1 173288783 173295423 + MGP_CBAJ_P0022551 Angptl1 protein_coding protein_coding MGP_CBAJ_T0005597.1 MGP_CBAJ_G0004706.1 mouse_genomes_project 1 37001532 37002354 + 4930535G08Rik lincRNA lincRNA MGP_CBAJ_T0022872.1 MGP_CBAJ_G0016434.1 mouse_genomes_project 1 182955430 182965846 + Mpc2 protein_coding retained_intron MGP_CBAJ_T0022873.1 MGP_CBAJ_G0016434.1 mouse_genomes_project 1 182955830 182982356 + MGP_CBAJ_P0022873 Mpc2 protein_coding protein_coding MGP_CBAJ_T0022874.1 MGP_CBAJ_G0016434.1 mouse_genomes_project 1 182956017 182978836 + Mpc2 protein_coding retained_intron MGP_CBAJ_T0022875.1 MGP_CBAJ_G0016434.1 mouse_genomes_project 1 182956158 182982250 + MGP_CBAJ_P0022875 Mpc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022876.1 MGP_CBAJ_G0016434.1 mouse_genomes_project 1 182979283 182982261 + Mpc2 protein_coding processed_transcript MGP_CBAJ_T0023246.1 MGP_CBAJ_G0016516.1 mouse_genomes_project 1 190429967 190441816 + MGP_CBAJ_P0023246 Pex19 protein_coding protein_coding MGP_CBAJ_T0023247.1 MGP_CBAJ_G0016516.1 mouse_genomes_project 1 190429968 190434211 + Pex19 protein_coding retained_intron MGP_CBAJ_T0023248.1 MGP_CBAJ_G0016516.1 mouse_genomes_project 1 190429974 190443025 + MGP_CBAJ_P0023248 Pex19 protein_coding protein_coding MGP_CBAJ_T0023249.1 MGP_CBAJ_G0016516.1 mouse_genomes_project 1 190429985 190433377 + Pex19 protein_coding retained_intron MGP_CBAJ_T0023250.1 MGP_CBAJ_G0016516.1 mouse_genomes_project 1 190429985 190432104 + Pex19 protein_coding retained_intron MGP_CBAJ_T0023251.1 MGP_CBAJ_G0016516.1 mouse_genomes_project 1 190440496 190441233 + Pex19 protein_coding retained_intron MGP_CBAJ_T0002768.1 MGP_CBAJ_G0002619.1 mouse_genomes_project 1 81017231 81022499 + Gm15841 antisense antisense MGP_CBAJ_T0005961.1 MGP_CBAJ_G0004983.1 mouse_genomes_project 1 211229377 211242957 + Gm29678 lincRNA lincRNA MGP_CBAJ_T0022621.1 MGP_CBAJ_G0016381.1 mouse_genomes_project 1 176929606 177009536 - MGP_CBAJ_P0022621 Tnn protein_coding protein_coding MGP_CBAJ_T0022622.1 MGP_CBAJ_G0016381.1 mouse_genomes_project 1 176930549 177003844 - MGP_CBAJ_P0022622 Tnn protein_coding protein_coding MGP_CBAJ_T0000455.1 MGP_CBAJ_G0000397.1 mouse_genomes_project 1 65455497 65457982 + TEC TEC MGP_CBAJ_T0012179.1 MGP_CBAJ_G0010291.1 mouse_genomes_project 1 183145698 183146488 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0022316.1 MGP_CBAJ_G0016327.1 mouse_genomes_project 1 168288855 168309640 - MGP_CBAJ_P0022316 Tsen15 protein_coding protein_coding MGP_CBAJ_T0022317.1 MGP_CBAJ_G0016327.1 mouse_genomes_project 1 168288958 168290203 - Tsen15 protein_coding retained_intron MGP_CBAJ_T0022318.1 MGP_CBAJ_G0016327.1 mouse_genomes_project 1 168289325 168309550 - MGP_CBAJ_P0022318 Tsen15 protein_coding protein_coding MGP_CBAJ_T0022319.1 MGP_CBAJ_G0016327.1 mouse_genomes_project 1 168289332 168301323 - Tsen15 protein_coding retained_intron MGP_CBAJ_T0022320.1 MGP_CBAJ_G0016327.1 mouse_genomes_project 1 168289895 168303873 - Tsen15 protein_coding retained_intron MGP_CBAJ_T0022321.1 MGP_CBAJ_G0016327.1 mouse_genomes_project 1 168300922 168309646 - Tsen15 protein_coding processed_transcript MGP_CBAJ_T0022322.1 MGP_CBAJ_G0016327.1 mouse_genomes_project 1 168303983 168309578 - Tsen15 protein_coding retained_intron MGP_CBAJ_T0012151.1 MGP_CBAJ_G0010263.1 mouse_genomes_project 1 169692794 169693901 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016767.1 MGP_CBAJ_G0014848.1 mouse_genomes_project 1 145237445 145294457 + Gm29103 processed_transcript processed_transcript MGP_CBAJ_T0023764.1 MGP_CBAJ_G0016649.1 mouse_genomes_project 1 205531723 205583428 - MGP_CBAJ_P0023764 Iars2 protein_coding protein_coding MGP_CBAJ_T0023765.1 MGP_CBAJ_G0016649.1 mouse_genomes_project 1 205532566 205535358 - Iars2 protein_coding processed_transcript MGP_CBAJ_T0023766.1 MGP_CBAJ_G0016649.1 mouse_genomes_project 1 205542113 205583428 - MGP_CBAJ_P0023766 Iars2 protein_coding protein_coding MGP_CBAJ_T0023767.1 MGP_CBAJ_G0016649.1 mouse_genomes_project 1 205562719 205583428 - MGP_CBAJ_P0023767 Iars2 protein_coding protein_coding MGP_CBAJ_T0023768.1 MGP_CBAJ_G0016649.1 mouse_genomes_project 1 205575132 205583428 - Iars2 protein_coding retained_intron MGP_CBAJ_T0022323.1 MGP_CBAJ_G0016328.1 mouse_genomes_project 1 168324912 168432445 + MGP_CBAJ_P0022323 Colgalt2 protein_coding protein_coding MGP_CBAJ_T0022324.1 MGP_CBAJ_G0016328.1 mouse_genomes_project 1 168324912 168431568 + MGP_CBAJ_P0022324 Colgalt2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012007.1 MGP_CBAJ_G0010119.1 mouse_genomes_project 1 99685387 99690022 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098541.1 MGP_CBAJ_G0036796.1 mouse_genomes_project 1 77987894 77988085 + Gm25360 snRNA snRNA MGP_CBAJ_T0021409.1 MGP_CBAJ_G0016135.1 mouse_genomes_project 1 130563310 130796514 - MGP_CBAJ_P0021409 Gli2 protein_coding protein_coding MGP_CBAJ_T0021410.1 MGP_CBAJ_G0016135.1 mouse_genomes_project 1 130581339 130796234 - MGP_CBAJ_P0021410 Gli2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021411.1 MGP_CBAJ_G0016135.1 mouse_genomes_project 1 130581339 130796234 - MGP_CBAJ_P0021411 Gli2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021412.1 MGP_CBAJ_G0016135.1 mouse_genomes_project 1 130581339 130796234 - MGP_CBAJ_P0021412 Gli2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021413.1 MGP_CBAJ_G0016135.1 mouse_genomes_project 1 130581339 130796234 - MGP_CBAJ_P0021413 Gli2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021414.1 MGP_CBAJ_G0016135.1 mouse_genomes_project 1 130581339 130796234 - MGP_CBAJ_P0021414 Gli2 protein_coding protein_coding MGP_CBAJ_T0021415.1 MGP_CBAJ_G0016135.1 mouse_genomes_project 1 130581341 130796234 - MGP_CBAJ_P0021415 Gli2 protein_coding protein_coding MGP_CBAJ_T0021416.1 MGP_CBAJ_G0016135.1 mouse_genomes_project 1 130581341 130796234 - MGP_CBAJ_P0021416 Gli2 protein_coding protein_coding MGP_CBAJ_T0021417.1 MGP_CBAJ_G0016135.1 mouse_genomes_project 1 130603573 130720406 - Gli2 protein_coding processed_transcript MGP_CBAJ_T0000596.1 MGP_CBAJ_G0000538.1 mouse_genomes_project 1 145389211 145395170 + TEC TEC MGP_CBAJ_T0099779.1 MGP_CBAJ_G0038034.1 mouse_genomes_project 1 105758839 105758967 + Gm26078 snoRNA snoRNA MGP_CBAJ_T0023263.1 MGP_CBAJ_G0016518.1 mouse_genomes_project 1 190515882 190525930 - MGP_CBAJ_P0023263 Pea15a protein_coding protein_coding MGP_CBAJ_T0023264.1 MGP_CBAJ_G0016518.1 mouse_genomes_project 1 190515882 190525930 - MGP_CBAJ_P0023264 Pea15a protein_coding protein_coding MGP_CBAJ_T0023265.1 MGP_CBAJ_G0016518.1 mouse_genomes_project 1 190517567 190518967 - Pea15a protein_coding processed_transcript MGP_CBAJ_T0023266.1 MGP_CBAJ_G0016518.1 mouse_genomes_project 1 190518312 190525823 - MGP_CBAJ_P0023266 Pea15a protein_coding protein_coding MGP_CBAJ_T0023267.1 MGP_CBAJ_G0016518.1 mouse_genomes_project 1 190518926 190525930 - Pea15a protein_coding retained_intron MGP_CBAJ_T0022746.1 MGP_CBAJ_G0016403.1 mouse_genomes_project 1 179833710 179843297 - 7420461P10Rik protein_coding processed_transcript MGP_CBAJ_T0022747.1 MGP_CBAJ_G0016403.1 mouse_genomes_project 1 179833710 179844562 - MGP_CBAJ_P0022747 7420461P10Rik protein_coding protein_coding MGP_CBAJ_T0022748.1 MGP_CBAJ_G0016403.1 mouse_genomes_project 1 179833720 179844675 - MGP_CBAJ_P0022748 7420461P10Rik protein_coding protein_coding MGP_CBAJ_T0018788.1 MGP_CBAJ_G0015617.1 mouse_genomes_project 1 19831936 19881615 + MGP_CBAJ_P0018788 Paqr8 protein_coding protein_coding MGP_CBAJ_T0018789.1 MGP_CBAJ_G0015617.1 mouse_genomes_project 1 19861125 19881018 + MGP_CBAJ_P0018789 Paqr8 protein_coding protein_coding MGP_CBAJ_T0018790.1 MGP_CBAJ_G0015617.1 mouse_genomes_project 1 19861159 19877715 + MGP_CBAJ_P0018790 Paqr8 protein_coding protein_coding MGP_CBAJ_T0018791.1 MGP_CBAJ_G0015617.1 mouse_genomes_project 1 19864941 19877722 + MGP_CBAJ_P0018791 Paqr8 protein_coding protein_coding MGP_CBAJ_T0020007.1 MGP_CBAJ_G0015851.1 mouse_genomes_project 1 70105854 70126476 + Pikfyve protein_coding retained_intron MGP_CBAJ_T0020008.1 MGP_CBAJ_G0015851.1 mouse_genomes_project 1 70105860 70167821 + MGP_CBAJ_P0020008 Pikfyve protein_coding nonsense_mediated_decay MGP_CBAJ_T0020009.1 MGP_CBAJ_G0015851.1 mouse_genomes_project 1 70105864 70146927 + Pikfyve protein_coding retained_intron MGP_CBAJ_T0020010.1 MGP_CBAJ_G0015851.1 mouse_genomes_project 1 70105865 70113204 + Pikfyve protein_coding retained_intron MGP_CBAJ_T0020011.1 MGP_CBAJ_G0015851.1 mouse_genomes_project 1 70105867 70126944 + Pikfyve protein_coding processed_transcript MGP_CBAJ_T0020012.1 MGP_CBAJ_G0015851.1 mouse_genomes_project 1 70105873 70205953 + MGP_CBAJ_P0020012 Pikfyve protein_coding protein_coding MGP_CBAJ_T0020013.1 MGP_CBAJ_G0015851.1 mouse_genomes_project 1 70105875 70154199 + Pikfyve protein_coding retained_intron MGP_CBAJ_T0020014.1 MGP_CBAJ_G0015851.1 mouse_genomes_project 1 70105884 70112908 + MGP_CBAJ_P0020014 Pikfyve protein_coding nonsense_mediated_decay MGP_CBAJ_T0020015.1 MGP_CBAJ_G0015851.1 mouse_genomes_project 1 70105921 70201273 + MGP_CBAJ_P0020015 Pikfyve protein_coding protein_coding MGP_CBAJ_T0020016.1 MGP_CBAJ_G0015851.1 mouse_genomes_project 1 70117496 70137019 + Pikfyve protein_coding retained_intron MGP_CBAJ_T0018701.1 MGP_CBAJ_G0015597.1 mouse_genomes_project 1 14499245 14500033 - Rpl7 protein_coding processed_transcript MGP_CBAJ_T0018702.1 MGP_CBAJ_G0015597.1 mouse_genomes_project 1 14499245 14504617 - MGP_CBAJ_P0018702 Rpl7 protein_coding protein_coding MGP_CBAJ_T0018703.1 MGP_CBAJ_G0015597.1 mouse_genomes_project 1 14499256 14504106 - Rpl7 protein_coding retained_intron MGP_CBAJ_T0018704.1 MGP_CBAJ_G0015597.1 mouse_genomes_project 1 14499478 14501008 - Rpl7 protein_coding retained_intron MGP_CBAJ_T0018705.1 MGP_CBAJ_G0015597.1 mouse_genomes_project 1 14499730 14503931 - MGP_CBAJ_P0018705 Rpl7 protein_coding protein_coding MGP_CBAJ_T0018706.1 MGP_CBAJ_G0015597.1 mouse_genomes_project 1 14500441 14504088 - Rpl7 protein_coding retained_intron MGP_CBAJ_T0098244.1 MGP_CBAJ_G0036516.1 mouse_genomes_project 1 168615478 168618861 - Gm15479 sense_intronic sense_intronic MGP_CBAJ_T0023429.1 MGP_CBAJ_G0016579.1 mouse_genomes_project 1 194909157 195272805 - MGP_CBAJ_P0023429 Pld5 protein_coding protein_coding MGP_CBAJ_T0023430.1 MGP_CBAJ_G0016579.1 mouse_genomes_project 1 194909258 195272819 - MGP_CBAJ_P0023430 Pld5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023431.1 MGP_CBAJ_G0016579.1 mouse_genomes_project 1 194910577 195207689 - MGP_CBAJ_P0023431 Pld5 protein_coding protein_coding MGP_CBAJ_T0023432.1 MGP_CBAJ_G0016579.1 mouse_genomes_project 1 194955215 195272782 - Pld5 protein_coding retained_intron MGP_CBAJ_T0023433.1 MGP_CBAJ_G0016579.1 mouse_genomes_project 1 195015514 195207588 - Pld5 protein_coding retained_intron MGP_CBAJ_T0023434.1 MGP_CBAJ_G0016579.1 mouse_genomes_project 1 195258280 195272781 - MGP_CBAJ_P0023434 Pld5 protein_coding protein_coding MGP_CBAJ_T0023875.1 MGP_CBAJ_G0016669.1 mouse_genomes_project 1 211831082 211862593 - MGP_CBAJ_P0023875 Vash2 protein_coding protein_coding MGP_CBAJ_T0023876.1 MGP_CBAJ_G0016669.1 mouse_genomes_project 1 211831084 211862299 - MGP_CBAJ_P0023876 Vash2 protein_coding protein_coding MGP_CBAJ_T0023877.1 MGP_CBAJ_G0016669.1 mouse_genomes_project 1 211856198 211862511 - Vash2 protein_coding processed_transcript MGP_CBAJ_T0023435.1 MGP_CBAJ_G0016580.1 mouse_genomes_project 1 195794398 195879310 - MGP_CBAJ_P0023435 Cep170 protein_coding protein_coding MGP_CBAJ_T0023436.1 MGP_CBAJ_G0016580.1 mouse_genomes_project 1 195794407 195888219 - MGP_CBAJ_P0023436 Cep170 protein_coding protein_coding MGP_CBAJ_T0023437.1 MGP_CBAJ_G0016580.1 mouse_genomes_project 1 195794407 195820902 - MGP_CBAJ_P0023437 Cep170 protein_coding protein_coding MGP_CBAJ_T0023438.1 MGP_CBAJ_G0016580.1 mouse_genomes_project 1 195794408 195862662 - MGP_CBAJ_P0023438 Cep170 protein_coding protein_coding MGP_CBAJ_T0023439.1 MGP_CBAJ_G0016580.1 mouse_genomes_project 1 195794846 195813729 - Cep170 protein_coding retained_intron MGP_CBAJ_T0023440.1 MGP_CBAJ_G0016580.1 mouse_genomes_project 1 195794884 195822085 - MGP_CBAJ_P0023440 Cep170 protein_coding protein_coding MGP_CBAJ_T0023441.1 MGP_CBAJ_G0016580.1 mouse_genomes_project 1 195795085 195862672 - MGP_CBAJ_P0023441 Cep170 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023442.1 MGP_CBAJ_G0016580.1 mouse_genomes_project 1 195795894 195813378 - MGP_CBAJ_P0023442 Cep170 protein_coding protein_coding MGP_CBAJ_T0023443.1 MGP_CBAJ_G0016580.1 mouse_genomes_project 1 195796330 195819966 - Cep170 protein_coding processed_transcript MGP_CBAJ_T0023444.1 MGP_CBAJ_G0016580.1 mouse_genomes_project 1 195801227 195803850 - Cep170 protein_coding retained_intron MGP_CBAJ_T0023445.1 MGP_CBAJ_G0016580.1 mouse_genomes_project 1 195838247 195843810 - Cep170 protein_coding retained_intron MGP_CBAJ_T0023446.1 MGP_CBAJ_G0016580.1 mouse_genomes_project 1 195840005 195849242 - MGP_CBAJ_P0023446 Cep170 protein_coding protein_coding MGP_CBAJ_T0023447.1 MGP_CBAJ_G0016580.1 mouse_genomes_project 1 195843944 195888219 - MGP_CBAJ_P0023447 Cep170 protein_coding protein_coding MGP_CBAJ_T0023448.1 MGP_CBAJ_G0016580.1 mouse_genomes_project 1 195857421 195879316 - Cep170 protein_coding retained_intron MGP_CBAJ_T0023449.1 MGP_CBAJ_G0016580.1 mouse_genomes_project 1 195857498 195879310 - MGP_CBAJ_P0023449 Cep170 protein_coding protein_coding MGP_CBAJ_T0000382.1 MGP_CBAJ_G0000325.1 mouse_genomes_project 1 25253945 25259379 - TEC TEC MGP_CBAJ_T0021457.1 MGP_CBAJ_G0016146.1 mouse_genomes_project 1 132011358 132085066 + MGP_CBAJ_P0021457 3110009E18Rik protein_coding protein_coding MGP_CBAJ_T0021458.1 MGP_CBAJ_G0016146.1 mouse_genomes_project 1 132011366 132085066 + MGP_CBAJ_P0021458 3110009E18Rik protein_coding protein_coding MGP_CBAJ_T0021459.1 MGP_CBAJ_G0016146.1 mouse_genomes_project 1 132011371 132085066 + MGP_CBAJ_P0021459 3110009E18Rik protein_coding protein_coding MGP_CBAJ_T0021460.1 MGP_CBAJ_G0016146.1 mouse_genomes_project 1 132042964 132060199 + 3110009E18Rik protein_coding processed_transcript MGP_CBAJ_T0021461.1 MGP_CBAJ_G0016146.1 mouse_genomes_project 1 132043036 132064249 + MGP_CBAJ_P0021461 3110009E18Rik protein_coding protein_coding MGP_CBAJ_T0021462.1 MGP_CBAJ_G0016146.1 mouse_genomes_project 1 132052951 132071288 + 3110009E18Rik protein_coding processed_transcript MGP_CBAJ_T0098573.1 MGP_CBAJ_G0036828.1 mouse_genomes_project 1 159467151 159467258 - Gm23672 snRNA snRNA MGP_CBAJ_T0019827.1 MGP_CBAJ_G0015815.1 mouse_genomes_project 1 64412640 64456756 - MGP_CBAJ_P0019827 Wdr12 protein_coding protein_coding MGP_CBAJ_T0019828.1 MGP_CBAJ_G0015815.1 mouse_genomes_project 1 64435765 64457493 - MGP_CBAJ_P0019828 Wdr12 protein_coding protein_coding MGP_CBAJ_T0019829.1 MGP_CBAJ_G0015815.1 mouse_genomes_project 1 64435765 64456994 - MGP_CBAJ_P0019829 Wdr12 protein_coding protein_coding MGP_CBAJ_T0019830.1 MGP_CBAJ_G0015815.1 mouse_genomes_project 1 64441978 64444656 - Wdr12 protein_coding retained_intron MGP_CBAJ_T0019831.1 MGP_CBAJ_G0015815.1 mouse_genomes_project 1 64442688 64444833 - Wdr12 protein_coding processed_transcript MGP_CBAJ_T0019832.1 MGP_CBAJ_G0015815.1 mouse_genomes_project 1 64446934 64456983 - MGP_CBAJ_P0019832 Wdr12 protein_coding protein_coding MGP_CBAJ_T0019833.1 MGP_CBAJ_G0015815.1 mouse_genomes_project 1 64446934 64456973 - MGP_CBAJ_P0019833 Wdr12 protein_coding protein_coding MGP_CBAJ_T0019834.1 MGP_CBAJ_G0015815.1 mouse_genomes_project 1 64452891 64456545 - Wdr12 protein_coding retained_intron MGP_CBAJ_T0005892.1 MGP_CBAJ_G0004930.1 mouse_genomes_project 1 183257366 183258588 + Gm37073 lincRNA lincRNA MGP_CBAJ_T0012159.1 MGP_CBAJ_G0010271.1 mouse_genomes_project 1 173928407 173928809 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099794.1 MGP_CBAJ_G0038049.1 mouse_genomes_project 1 141297209 141297343 + Gm23902 snoRNA snoRNA MGP_CBAJ_T0018458.1 MGP_CBAJ_G0015556.1 mouse_genomes_project 1 2028897 2041306 - MGP_CBAJ_P0018458 Mrpl15 protein_coding protein_coding MGP_CBAJ_T0018459.1 MGP_CBAJ_G0015556.1 mouse_genomes_project 1 2028903 2041335 - MGP_CBAJ_P0018459 Mrpl15 protein_coding protein_coding MGP_CBAJ_T0018460.1 MGP_CBAJ_G0015556.1 mouse_genomes_project 1 2030076 2041294 - MGP_CBAJ_P0018460 Mrpl15 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018461.1 MGP_CBAJ_G0015556.1 mouse_genomes_project 1 2032028 2041335 - Mrpl15 protein_coding processed_transcript MGP_CBAJ_T0018462.1 MGP_CBAJ_G0015556.1 mouse_genomes_project 1 2035634 2040161 - Mrpl15 protein_coding retained_intron MGP_CBAJ_T0018463.1 MGP_CBAJ_G0015556.1 mouse_genomes_project 1 2036888 2041335 - MGP_CBAJ_P0018463 Mrpl15 protein_coding protein_coding MGP_CBAJ_T0018464.1 MGP_CBAJ_G0015556.1 mouse_genomes_project 1 2039152 2041288 - Mrpl15 protein_coding retained_intron MGP_CBAJ_T0000661.1 MGP_CBAJ_G0000601.1 mouse_genomes_project 1 173098373 173098774 + TEC TEC MGP_CBAJ_T0000513.1 MGP_CBAJ_G0000455.1 mouse_genomes_project 1 94041820 94042995 + TEC TEC MGP_CBAJ_T0021623.1 MGP_CBAJ_G0016180.1 mouse_genomes_project 1 143893680 143904644 + MGP_CBAJ_P0021623 Yod1 protein_coding protein_coding MGP_CBAJ_T0005963.1 MGP_CBAJ_G0004985.1 mouse_genomes_project 1 211444146 211454369 + Gm30932 lincRNA lincRNA MGP_CBAJ_T0023381.1 MGP_CBAJ_G0016568.1 mouse_genomes_project 1 193319768 193327174 + MGP_CBAJ_P0023381 Olfr220 protein_coding protein_coding MGP_CBAJ_T0023382.1 MGP_CBAJ_G0016568.1 mouse_genomes_project 1 193326196 193327174 + MGP_CBAJ_P0023382 Olfr220 protein_coding protein_coding MGP_CBAJ_T0002934.1 MGP_CBAJ_G0002749.1 mouse_genomes_project 1 214275374 214280489 + Gm15872 antisense antisense MGP_CBAJ_T0000396.1 MGP_CBAJ_G0000339.1 mouse_genomes_project 1 33111997 33115378 + TEC TEC MGP_CBAJ_T0005935.1 MGP_CBAJ_G0004966.1 mouse_genomes_project 1 204482100 204513478 + Gm37223 lincRNA lincRNA MGP_CBAJ_T0005936.1 MGP_CBAJ_G0004966.1 mouse_genomes_project 1 204482100 204513481 + Gm37223 lincRNA lincRNA MGP_CBAJ_T0005937.1 MGP_CBAJ_G0004966.1 mouse_genomes_project 1 204482100 204513449 + Gm37223 lincRNA lincRNA MGP_CBAJ_T0005938.1 MGP_CBAJ_G0004966.1 mouse_genomes_project 1 204482104 204517180 + Gm37223 lincRNA lincRNA MGP_CBAJ_T0005939.1 MGP_CBAJ_G0004966.1 mouse_genomes_project 1 204482115 204517208 + Gm37223 lincRNA lincRNA MGP_CBAJ_T0005941.1 MGP_CBAJ_G0004966.1 mouse_genomes_project 1 204505603 204517180 + Gm37223 lincRNA lincRNA MGP_CBAJ_T0018555.1 MGP_CBAJ_G0015573.1 mouse_genomes_project 1 7523095 7647258 + MGP_CBAJ_P0018555 Sgk3 protein_coding protein_coding MGP_CBAJ_T0018556.1 MGP_CBAJ_G0015573.1 mouse_genomes_project 1 7523131 7647260 + MGP_CBAJ_P0018556 Sgk3 protein_coding protein_coding MGP_CBAJ_T0018557.1 MGP_CBAJ_G0015573.1 mouse_genomes_project 1 7523131 7647185 + MGP_CBAJ_P0018557 Sgk3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018558.1 MGP_CBAJ_G0015573.1 mouse_genomes_project 1 7523146 7560411 + Sgk3 protein_coding retained_intron MGP_CBAJ_T0018559.1 MGP_CBAJ_G0015573.1 mouse_genomes_project 1 7523173 7646033 + MGP_CBAJ_P0018559 Sgk3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018560.1 MGP_CBAJ_G0015573.1 mouse_genomes_project 1 7523196 7646423 + MGP_CBAJ_P0018560 Sgk3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018561.1 MGP_CBAJ_G0015573.1 mouse_genomes_project 1 7584880 7647258 + MGP_CBAJ_P0018561 Sgk3 protein_coding protein_coding MGP_CBAJ_T0018562.1 MGP_CBAJ_G0015573.1 mouse_genomes_project 1 7584929 7605266 + Sgk3 protein_coding processed_transcript MGP_CBAJ_T0018563.1 MGP_CBAJ_G0015573.1 mouse_genomes_project 1 7584929 7612189 + Sgk3 protein_coding retained_intron MGP_CBAJ_T0018564.1 MGP_CBAJ_G0015573.1 mouse_genomes_project 1 7585005 7646268 + MGP_CBAJ_P0018564 Sgk3 protein_coding protein_coding MGP_CBAJ_T0018565.1 MGP_CBAJ_G0015573.1 mouse_genomes_project 1 7626815 7633163 + Sgk3 protein_coding retained_intron MGP_CBAJ_T0018566.1 MGP_CBAJ_G0015573.1 mouse_genomes_project 1 7641853 7645602 + Sgk3 protein_coding retained_intron MGP_CBAJ_T0005786.1 MGP_CBAJ_G0004847.1 mouse_genomes_project 1 130801363 130802738 + Gm26831 lincRNA lincRNA MGP_CBAJ_T0005747.1 MGP_CBAJ_G0004814.1 mouse_genomes_project 1 98789974 98794609 + Gm9991 lincRNA lincRNA MGP_CBAJ_T0000411.1 MGP_CBAJ_G0000353.1 mouse_genomes_project 1 37547767 37549927 + TEC TEC MGP_CBAJ_T0018496.1 MGP_CBAJ_G0015564.1 mouse_genomes_project 1 3609979 3642307 + MGP_CBAJ_P0018496 Rb1cc1 protein_coding protein_coding MGP_CBAJ_T0018497.1 MGP_CBAJ_G0015564.1 mouse_genomes_project 1 3610009 3646200 + MGP_CBAJ_P0018497 Rb1cc1 protein_coding protein_coding MGP_CBAJ_T0018498.1 MGP_CBAJ_G0015564.1 mouse_genomes_project 1 3618790 3638767 + Rb1cc1 protein_coding retained_intron MGP_CBAJ_T0018499.1 MGP_CBAJ_G0015564.1 mouse_genomes_project 1 3619013 3683927 + MGP_CBAJ_P0018499 Rb1cc1 protein_coding protein_coding MGP_CBAJ_T0018500.1 MGP_CBAJ_G0015564.1 mouse_genomes_project 1 3619135 3642006 + MGP_CBAJ_P0018500 Rb1cc1 protein_coding protein_coding MGP_CBAJ_T0018501.1 MGP_CBAJ_G0015564.1 mouse_genomes_project 1 3636063 3657661 + MGP_CBAJ_P0018501 Rb1cc1 protein_coding protein_coding MGP_CBAJ_T0018502.1 MGP_CBAJ_G0015564.1 mouse_genomes_project 1 3648798 3656990 + Rb1cc1 protein_coding retained_intron MGP_CBAJ_T0018503.1 MGP_CBAJ_G0015564.1 mouse_genomes_project 1 3657719 3684142 + MGP_CBAJ_P0018503 Rb1cc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018504.1 MGP_CBAJ_G0015564.1 mouse_genomes_project 1 3658608 3659891 + Rb1cc1 protein_coding processed_transcript MGP_CBAJ_T0018505.1 MGP_CBAJ_G0015564.1 mouse_genomes_project 1 3658726 3676119 + Rb1cc1 protein_coding retained_intron MGP_CBAJ_T0018506.1 MGP_CBAJ_G0015564.1 mouse_genomes_project 1 3671370 3673422 + Rb1cc1 protein_coding retained_intron MGP_CBAJ_T0018507.1 MGP_CBAJ_G0015564.1 mouse_genomes_project 1 3673470 3675461 + Rb1cc1 protein_coding retained_intron MGP_CBAJ_T0018508.1 MGP_CBAJ_G0015564.1 mouse_genomes_project 1 3673500 3684141 + MGP_CBAJ_P0018508 Rb1cc1 protein_coding protein_coding MGP_CBAJ_T0018509.1 MGP_CBAJ_G0015564.1 mouse_genomes_project 1 3675914 3683075 + Rb1cc1 protein_coding retained_intron MGP_CBAJ_T0018510.1 MGP_CBAJ_G0015564.1 mouse_genomes_project 1 3680987 3685227 + Rb1cc1 protein_coding retained_intron MGP_CBAJ_T0023904.1 MGP_CBAJ_G0016676.1 mouse_genomes_project 1 212092504 212108267 - MGP_CBAJ_P0023904 Atf3 protein_coding protein_coding MGP_CBAJ_T0023905.1 MGP_CBAJ_G0016676.1 mouse_genomes_project 1 212092504 212146335 - MGP_CBAJ_P0023905 Atf3 protein_coding protein_coding MGP_CBAJ_T0023906.1 MGP_CBAJ_G0016676.1 mouse_genomes_project 1 212093633 212108035 - Atf3 protein_coding processed_transcript MGP_CBAJ_T0012197.1 MGP_CBAJ_G0010309.1 mouse_genomes_project 1 195673275 195677334 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002908.1 MGP_CBAJ_G0002731.1 mouse_genomes_project 1 207414132 207417207 - Gm37912 antisense antisense MGP_CBAJ_T0101501.1 MGP_CBAJ_G0039533.1 mouse_genomes_project 1 192894244 192894739 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0000439.1 MGP_CBAJ_G0000381.1 mouse_genomes_project 1 58282915 58284325 - TEC TEC MGP_CBAJ_T0000404.1 MGP_CBAJ_G0000346.1 mouse_genomes_project 1 34662315 34663943 - TEC TEC MGP_CBAJ_T0012086.1 MGP_CBAJ_G0010198.1 mouse_genomes_project 1 135348030 135349328 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098226.1 MGP_CBAJ_G0036499.1 mouse_genomes_project 1 54186772 54189056 + Gm28320 sense_intronic sense_intronic MGP_CBAJ_T0018511.1 MGP_CBAJ_G0015565.1 mouse_genomes_project 1 3940493 4348481 + MGP_CBAJ_P0018511 St18 protein_coding protein_coding MGP_CBAJ_T0018512.1 MGP_CBAJ_G0015565.1 mouse_genomes_project 1 3940593 4348487 + MGP_CBAJ_P0018512 St18 protein_coding protein_coding MGP_CBAJ_T0018513.1 MGP_CBAJ_G0015565.1 mouse_genomes_project 1 4198864 4348487 + MGP_CBAJ_P0018513 St18 protein_coding protein_coding MGP_CBAJ_T0018514.1 MGP_CBAJ_G0015565.1 mouse_genomes_project 1 4198866 4274844 + MGP_CBAJ_P0018514 St18 protein_coding protein_coding MGP_CBAJ_T0018515.1 MGP_CBAJ_G0015565.1 mouse_genomes_project 1 4198883 4274969 + MGP_CBAJ_P0018515 St18 protein_coding protein_coding MGP_CBAJ_T0018516.1 MGP_CBAJ_G0015565.1 mouse_genomes_project 1 4198914 4347020 + MGP_CBAJ_P0018516 St18 protein_coding protein_coding MGP_CBAJ_T0018517.1 MGP_CBAJ_G0015565.1 mouse_genomes_project 1 4198915 4346363 + MGP_CBAJ_P0018517 St18 protein_coding protein_coding MGP_CBAJ_T0018518.1 MGP_CBAJ_G0015565.1 mouse_genomes_project 1 4203684 4282051 + MGP_CBAJ_P0018518 St18 protein_coding protein_coding MGP_CBAJ_T0018519.1 MGP_CBAJ_G0015565.1 mouse_genomes_project 1 4206390 4348487 + MGP_CBAJ_P0018519 St18 protein_coding protein_coding MGP_CBAJ_T0018520.1 MGP_CBAJ_G0015565.1 mouse_genomes_project 1 4282153 4288829 + MGP_CBAJ_P0018520 St18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018521.1 MGP_CBAJ_G0015565.1 mouse_genomes_project 1 4302220 4320867 + St18 protein_coding processed_transcript MGP_CBAJ_T0018522.1 MGP_CBAJ_G0015565.1 mouse_genomes_project 1 4315170 4334789 + St18 protein_coding processed_transcript MGP_CBAJ_T0018523.1 MGP_CBAJ_G0015565.1 mouse_genomes_project 1 4344877 4347154 + MGP_CBAJ_P0018523 St18 protein_coding protein_coding MGP_CBAJ_T0098483.1 MGP_CBAJ_G0036742.1 mouse_genomes_project 1 209904914 209905575 - 2900042K21Rik sense_overlapping sense_overlapping MGP_CBAJ_T0012229.1 MGP_CBAJ_G0010341.1 mouse_genomes_project 1 213892900 213893354 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101494.1 MGP_CBAJ_G0039526.1 mouse_genomes_project 1 191515435 191515735 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0005661.1 MGP_CBAJ_G0004748.1 mouse_genomes_project 1 65758403 65764625 - Gm28083 lincRNA lincRNA MGP_CBAJ_T0020973.1 MGP_CBAJ_G0016041.1 mouse_genomes_project 1 99111548 99120390 - MGP_CBAJ_P0020973 Rab17 protein_coding protein_coding MGP_CBAJ_T0020974.1 MGP_CBAJ_G0016041.1 mouse_genomes_project 1 99111550 99118391 - MGP_CBAJ_P0020974 Rab17 protein_coding protein_coding MGP_CBAJ_T0020975.1 MGP_CBAJ_G0016041.1 mouse_genomes_project 1 99112146 99120277 - Rab17 protein_coding processed_transcript MGP_CBAJ_T0020976.1 MGP_CBAJ_G0016041.1 mouse_genomes_project 1 99112269 99118341 - Rab17 protein_coding processed_transcript MGP_CBAJ_T0020977.1 MGP_CBAJ_G0016041.1 mouse_genomes_project 1 99113400 99120373 - MGP_CBAJ_P0020977 Rab17 protein_coding protein_coding MGP_CBAJ_T0009400.1 MGP_CBAJ_G0007538.1 mouse_genomes_project 1 101221408 101221474 + Mir149 miRNA miRNA MGP_CBAJ_T0000408.1 MGP_CBAJ_G0000350.1 mouse_genomes_project 1 35079713 35081005 - TEC TEC MGP_CBAJ_T0009415.1 MGP_CBAJ_G0007553.1 mouse_genomes_project 1 147260863 147260951 - Mir6903 miRNA miRNA MGP_CBAJ_T0020382.1 MGP_CBAJ_G0015920.1 mouse_genomes_project 1 81284435 81289204 + MGP_CBAJ_P0020382 Stk16 protein_coding protein_coding MGP_CBAJ_T0020383.1 MGP_CBAJ_G0015920.1 mouse_genomes_project 1 81284443 81285469 + Stk16 protein_coding retained_intron MGP_CBAJ_T0020384.1 MGP_CBAJ_G0015920.1 mouse_genomes_project 1 81284445 81285833 + MGP_CBAJ_P0020384 Stk16 protein_coding protein_coding MGP_CBAJ_T0020385.1 MGP_CBAJ_G0015920.1 mouse_genomes_project 1 81284467 81287840 + MGP_CBAJ_P0020385 Stk16 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020386.1 MGP_CBAJ_G0015920.1 mouse_genomes_project 1 81284471 81285832 + MGP_CBAJ_P0020386 Stk16 protein_coding protein_coding MGP_CBAJ_T0020387.1 MGP_CBAJ_G0015920.1 mouse_genomes_project 1 81284473 81287837 + Stk16 protein_coding retained_intron MGP_CBAJ_T0020388.1 MGP_CBAJ_G0015920.1 mouse_genomes_project 1 81284477 81286735 + Stk16 protein_coding processed_transcript MGP_CBAJ_T0020389.1 MGP_CBAJ_G0015920.1 mouse_genomes_project 1 81284651 81286826 + MGP_CBAJ_P0020389 Stk16 protein_coding protein_coding MGP_CBAJ_T0020390.1 MGP_CBAJ_G0015920.1 mouse_genomes_project 1 81284837 81287549 + MGP_CBAJ_P0020390 Stk16 protein_coding protein_coding MGP_CBAJ_T0020391.1 MGP_CBAJ_G0015920.1 mouse_genomes_project 1 81285559 81286785 + Stk16 protein_coding retained_intron MGP_CBAJ_T0020392.1 MGP_CBAJ_G0015920.1 mouse_genomes_project 1 81285600 81286691 + Stk16 protein_coding retained_intron MGP_CBAJ_T0020393.1 MGP_CBAJ_G0015920.1 mouse_genomes_project 1 81285602 81286003 + Stk16 protein_coding retained_intron MGP_CBAJ_T0020394.1 MGP_CBAJ_G0015920.1 mouse_genomes_project 1 81285996 81286753 + Stk16 protein_coding retained_intron MGP_CBAJ_T0020395.1 MGP_CBAJ_G0015920.1 mouse_genomes_project 1 81286221 81287614 + Stk16 protein_coding processed_transcript MGP_CBAJ_T0020396.1 MGP_CBAJ_G0015920.1 mouse_genomes_project 1 81286229 81287511 + Stk16 protein_coding retained_intron MGP_CBAJ_T0020397.1 MGP_CBAJ_G0015920.1 mouse_genomes_project 1 81286658 81287629 + Stk16 protein_coding retained_intron MGP_CBAJ_T0000431.1 MGP_CBAJ_G0000373.1 mouse_genomes_project 1 49420289 49426125 - TEC TEC MGP_CBAJ_T0022981.1 MGP_CBAJ_G0016456.1 mouse_genomes_project 1 185345301 185391292 + MGP_CBAJ_P0022981 Rxrg protein_coding protein_coding MGP_CBAJ_T0024041.1 MGP_CBAJ_G0016701.1 mouse_genomes_project 1 216174115 216196949 + MGP_CBAJ_P0024041 Cd34 protein_coding protein_coding MGP_CBAJ_T0024042.1 MGP_CBAJ_G0016701.1 mouse_genomes_project 1 216174171 216196949 + MGP_CBAJ_P0024042 Cd34 protein_coding protein_coding MGP_CBAJ_T0024043.1 MGP_CBAJ_G0016701.1 mouse_genomes_project 1 216174201 216186431 + Cd34 protein_coding retained_intron MGP_CBAJ_T0024044.1 MGP_CBAJ_G0016701.1 mouse_genomes_project 1 216174247 216176526 + Cd34 protein_coding retained_intron MGP_CBAJ_T0024045.1 MGP_CBAJ_G0016701.1 mouse_genomes_project 1 216174291 216194220 + MGP_CBAJ_P0024045 Cd34 protein_coding nonsense_mediated_decay MGP_CBAJ_T0011114.1 MGP_CBAJ_G0009252.1 mouse_genomes_project 1 14266032 14266335 + Gm23259 misc_RNA misc_RNA MGP_CBAJ_T0011777.1 MGP_CBAJ_G0009889.1 mouse_genomes_project 1 15979897 15980383 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0020883.1 MGP_CBAJ_G0016013.1 mouse_genomes_project 1 95515626 95617019 + MGP_CBAJ_P0020883 Dgkd protein_coding protein_coding MGP_CBAJ_T0020884.1 MGP_CBAJ_G0016013.1 mouse_genomes_project 1 95547144 95588299 + Dgkd protein_coding retained_intron MGP_CBAJ_T0020885.1 MGP_CBAJ_G0016013.1 mouse_genomes_project 1 95590452 95594526 + Dgkd protein_coding retained_intron MGP_CBAJ_T0020886.1 MGP_CBAJ_G0016013.1 mouse_genomes_project 1 95604536 95610782 + MGP_CBAJ_P0020886 Dgkd protein_coding protein_coding MGP_CBAJ_T0020887.1 MGP_CBAJ_G0016013.1 mouse_genomes_project 1 95606925 95617709 + MGP_CBAJ_P0020887 Dgkd protein_coding protein_coding MGP_CBAJ_T0020888.1 MGP_CBAJ_G0016013.1 mouse_genomes_project 1 95607811 95612794 + Dgkd protein_coding retained_intron MGP_CBAJ_T0020889.1 MGP_CBAJ_G0016013.1 mouse_genomes_project 1 95610913 95617707 + MGP_CBAJ_P0020889 Dgkd protein_coding protein_coding MGP_CBAJ_T0012137.1 MGP_CBAJ_G0010249.1 mouse_genomes_project 1 164493121 164497094 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0022806.1 MGP_CBAJ_G0016416.1 mouse_genomes_project 1 181277737 181332554 - MGP_CBAJ_P0022806 BC055324 protein_coding protein_coding MGP_CBAJ_T0022808.1 MGP_CBAJ_G0016416.1 mouse_genomes_project 1 181285498 181332554 - MGP_CBAJ_P0022808 BC055324 protein_coding protein_coding MGP_CBAJ_T0022809.1 MGP_CBAJ_G0016416.1 mouse_genomes_project 1 181286019 181295071 - MGP_CBAJ_P0022809 BC055324 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022810.1 MGP_CBAJ_G0016416.1 mouse_genomes_project 1 181302431 181307639 - BC055324 protein_coding retained_intron MGP_CBAJ_T0022811.1 MGP_CBAJ_G0016416.1 mouse_genomes_project 1 181324689 181332522 - MGP_CBAJ_P0022811 BC055324 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022812.1 MGP_CBAJ_G0016416.1 mouse_genomes_project 1 181327495 181332299 - BC055324 protein_coding processed_transcript MGP_CBAJ_T0000549.1 MGP_CBAJ_G0000491.1 mouse_genomes_project 1 116355641 116360594 + TEC TEC MGP_CBAJ_T0000422.1 MGP_CBAJ_G0000364.1 mouse_genomes_project 1 41606369 41607699 - TEC TEC MGP_CBAJ_T0012141.1 MGP_CBAJ_G0010253.1 mouse_genomes_project 1 165813328 165813930 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009425.1 MGP_CBAJ_G0007563.1 mouse_genomes_project 1 177175657 177175766 - Mir1927 miRNA miRNA MGP_CBAJ_T0000762.1 MGP_CBAJ_G0000700.1 mouse_genomes_project 1 213905469 213907566 - TEC TEC MGP_CBAJ_T0000763.1 MGP_CBAJ_G0000700.1 mouse_genomes_project 1 213905520 213907071 - TEC TEC MGP_CBAJ_T0012163.1 MGP_CBAJ_G0010275.1 mouse_genomes_project 1 174203687 174203860 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101465.1 MGP_CBAJ_G0039497.1 mouse_genomes_project 1 95957504 95958362 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0018769.1 MGP_CBAJ_G0015612.1 mouse_genomes_project 1 17987412 18022437 + MGP_CBAJ_P0018769 Tfap2b protein_coding protein_coding MGP_CBAJ_T0018770.1 MGP_CBAJ_G0015612.1 mouse_genomes_project 1 17987462 18021944 + MGP_CBAJ_P0018770 Tfap2b protein_coding protein_coding MGP_CBAJ_T0018771.1 MGP_CBAJ_G0015612.1 mouse_genomes_project 1 17990531 18018489 + MGP_CBAJ_P0018771 Tfap2b protein_coding protein_coding MGP_CBAJ_T0018772.1 MGP_CBAJ_G0015612.1 mouse_genomes_project 1 17990782 17993270 + Tfap2b protein_coding retained_intron MGP_CBAJ_T0018773.1 MGP_CBAJ_G0015612.1 mouse_genomes_project 1 17992706 17998856 + Tfap2b protein_coding retained_intron MGP_CBAJ_T0023450.1 MGP_CBAJ_G0016581.1 mouse_genomes_project 1 195888811 196023057 + Sdccag8 protein_coding retained_intron MGP_CBAJ_T0023451.1 MGP_CBAJ_G0016581.1 mouse_genomes_project 1 195888811 195920152 + Sdccag8 protein_coding retained_intron MGP_CBAJ_T0023452.1 MGP_CBAJ_G0016581.1 mouse_genomes_project 1 195888811 195931376 + MGP_CBAJ_P0023452 Sdccag8 protein_coding protein_coding MGP_CBAJ_T0023453.1 MGP_CBAJ_G0016581.1 mouse_genomes_project 1 195888811 196092097 + MGP_CBAJ_P0023453 Sdccag8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023454.1 MGP_CBAJ_G0016581.1 mouse_genomes_project 1 195888811 196092097 + MGP_CBAJ_P0023454 Sdccag8 protein_coding protein_coding MGP_CBAJ_T0023455.1 MGP_CBAJ_G0016581.1 mouse_genomes_project 1 196069889 196092097 + Sdccag8 protein_coding processed_transcript MGP_CBAJ_T0097882.1 MGP_CBAJ_G0036155.1 mouse_genomes_project 1 170496416 170496536 - n-R5s220 rRNA rRNA MGP_CBAJ_T0011759.1 MGP_CBAJ_G0009871.1 mouse_genomes_project 1 8541007 8541499 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011762.1 MGP_CBAJ_G0009874.1 mouse_genomes_project 1 9547118 9547380 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0019403.1 MGP_CBAJ_G0015739.1 mouse_genomes_project 1 48200390 48220571 - MGP_CBAJ_P0019403 Slc40a1 protein_coding protein_coding MGP_CBAJ_T0019404.1 MGP_CBAJ_G0015739.1 mouse_genomes_project 1 48207543 48220598 - Slc40a1 protein_coding retained_intron MGP_CBAJ_T0019405.1 MGP_CBAJ_G0015739.1 mouse_genomes_project 1 48211285 48218298 - Slc40a1 protein_coding processed_transcript MGP_CBAJ_T0019406.1 MGP_CBAJ_G0015739.1 mouse_genomes_project 1 48211293 48220251 - Slc40a1 protein_coding processed_transcript MGP_CBAJ_T0019407.1 MGP_CBAJ_G0015739.1 mouse_genomes_project 1 48213584 48221508 - MGP_CBAJ_P0019407 Slc40a1 protein_coding protein_coding MGP_CBAJ_T0019408.1 MGP_CBAJ_G0015739.1 mouse_genomes_project 1 48213584 48221508 - MGP_CBAJ_P0019408 Slc40a1 protein_coding protein_coding MGP_CBAJ_T0019409.1 MGP_CBAJ_G0015739.1 mouse_genomes_project 1 48213584 48221508 - MGP_CBAJ_P0019409 Slc40a1 protein_coding protein_coding MGP_CBAJ_T0019410.1 MGP_CBAJ_G0015739.1 mouse_genomes_project 1 48218720 48221512 - Slc40a1 protein_coding retained_intron MGP_CBAJ_T0000769.1 MGP_CBAJ_G0000706.1 mouse_genomes_project 1 215889763 215891599 + TEC TEC MGP_CBAJ_T0000547.1 MGP_CBAJ_G0000489.1 mouse_genomes_project 1 115988444 115991802 - TEC TEC MGP_CBAJ_T0002710.1 MGP_CBAJ_G0002578.1 mouse_genomes_project 1 38307024 38308016 - Gm37020 antisense antisense MGP_CBAJ_T0000657.1 MGP_CBAJ_G0000597.1 mouse_genomes_project 1 172358346 172362143 - TEC TEC MGP_CBAJ_T0098512.1 MGP_CBAJ_G0036767.1 mouse_genomes_project 1 7785346 7785450 - Gm24674 snRNA snRNA MGP_CBAJ_T0019423.1 MGP_CBAJ_G0015744.1 mouse_genomes_project 1 54340510 54358641 + MGP_CBAJ_P0019423 Sdpr protein_coding protein_coding MGP_CBAJ_T0098177.1 MGP_CBAJ_G0036450.1 mouse_genomes_project 1 176125000 176125140 + Scarna3a scaRNA scaRNA MGP_CBAJ_T0022148.1 MGP_CBAJ_G0016295.1 mouse_genomes_project 1 153681104 153720968 + MGP_CBAJ_P0022148 Aspm protein_coding protein_coding MGP_CBAJ_T0022149.1 MGP_CBAJ_G0016295.1 mouse_genomes_project 1 153681105 153700640 + Aspm protein_coding retained_intron MGP_CBAJ_T0022150.1 MGP_CBAJ_G0016295.1 mouse_genomes_project 1 153681107 153720971 + MGP_CBAJ_P0022150 Aspm protein_coding protein_coding MGP_CBAJ_T0022151.1 MGP_CBAJ_G0016295.1 mouse_genomes_project 1 153681151 153683481 + Aspm protein_coding retained_intron MGP_CBAJ_T0022152.1 MGP_CBAJ_G0016295.1 mouse_genomes_project 1 153709861 153714273 + Aspm protein_coding processed_transcript MGP_CBAJ_T0005932.1 MGP_CBAJ_G0004963.1 mouse_genomes_project 1 203598288 203598822 + Gm33973 lincRNA lincRNA MGP_CBAJ_T0021506.1 MGP_CBAJ_G0016157.1 mouse_genomes_project 1 138033124 138041110 + MGP_CBAJ_P0021506 Slc35f5 protein_coding protein_coding MGP_CBAJ_T0021507.1 MGP_CBAJ_G0016157.1 mouse_genomes_project 1 138033545 138068207 + MGP_CBAJ_P0021507 Slc35f5 protein_coding protein_coding MGP_CBAJ_T0021508.1 MGP_CBAJ_G0016157.1 mouse_genomes_project 1 138056943 138067540 + MGP_CBAJ_P0021508 Slc35f5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019518.1 MGP_CBAJ_G0015758.1 mouse_genomes_project 1 56395697 56525646 - MGP_CBAJ_P0019518 Pms1 protein_coding protein_coding MGP_CBAJ_T0019519.1 MGP_CBAJ_G0015758.1 mouse_genomes_project 1 56403591 56525645 - MGP_CBAJ_P0019519 Pms1 protein_coding protein_coding MGP_CBAJ_T0019520.1 MGP_CBAJ_G0015758.1 mouse_genomes_project 1 56486213 56525595 - Pms1 protein_coding processed_transcript MGP_CBAJ_T0019521.1 MGP_CBAJ_G0015758.1 mouse_genomes_project 1 56491498 56525603 - MGP_CBAJ_P0019521 Pms1 protein_coding protein_coding MGP_CBAJ_T0019522.1 MGP_CBAJ_G0015758.1 mouse_genomes_project 1 56498454 56512310 - MGP_CBAJ_P0019522 Pms1 protein_coding protein_coding MGP_CBAJ_T0019523.1 MGP_CBAJ_G0015758.1 mouse_genomes_project 1 56498476 56525643 - MGP_CBAJ_P0019523 Pms1 protein_coding protein_coding MGP_CBAJ_T0019524.1 MGP_CBAJ_G0015758.1 mouse_genomes_project 1 56511848 56525643 - MGP_CBAJ_P0019524 Pms1 protein_coding protein_coding MGP_CBAJ_T0019525.1 MGP_CBAJ_G0015758.1 mouse_genomes_project 1 56523920 56525643 - Pms1 protein_coding retained_intron MGP_CBAJ_T0020900.1 MGP_CBAJ_G0016015.1 mouse_genomes_project 1 95710476 95992941 + MGP_CBAJ_P0020900 protein_coding protein_coding MGP_CBAJ_T0020901.1 MGP_CBAJ_G0016015.1 mouse_genomes_project 1 95710499 95995698 + MGP_CBAJ_P0020901 protein_coding protein_coding MGP_CBAJ_T0020902.1 MGP_CBAJ_G0016015.1 mouse_genomes_project 1 95710557 95992873 + MGP_CBAJ_P0020902 protein_coding protein_coding MGP_CBAJ_T0022798.1 MGP_CBAJ_G0016414.1 mouse_genomes_project 1 181110992 181247187 + MGP_CBAJ_P0022798 Kifap3 protein_coding protein_coding MGP_CBAJ_T0022799.1 MGP_CBAJ_G0016414.1 mouse_genomes_project 1 181110992 181247187 + MGP_CBAJ_P0022799 Kifap3 protein_coding protein_coding MGP_CBAJ_T0002715.1 MGP_CBAJ_G0002582.1 mouse_genomes_project 1 39226932 39246172 + Gm15457 antisense antisense MGP_CBAJ_T0023849.1 MGP_CBAJ_G0016665.1 mouse_genomes_project 1 210666705 210723194 - MGP_CBAJ_P0023849 Smyd2 protein_coding protein_coding MGP_CBAJ_T0023850.1 MGP_CBAJ_G0016665.1 mouse_genomes_project 1 210666707 210675216 - Smyd2 protein_coding processed_transcript MGP_CBAJ_T0023851.1 MGP_CBAJ_G0016665.1 mouse_genomes_project 1 210666855 210668586 - Smyd2 protein_coding retained_intron MGP_CBAJ_T0023852.1 MGP_CBAJ_G0016665.1 mouse_genomes_project 1 210671259 210723084 - Smyd2 protein_coding retained_intron MGP_CBAJ_T0002690.1 MGP_CBAJ_G0002563.1 mouse_genomes_project 1 14681610 14700196 + Gm7568 antisense antisense MGP_CBAJ_T0002691.1 MGP_CBAJ_G0002563.1 mouse_genomes_project 1 14681610 14688512 + Gm7568 antisense antisense MGP_CBAJ_T0002692.1 MGP_CBAJ_G0002563.1 mouse_genomes_project 1 14681647 14688508 + Gm7568 antisense antisense MGP_CBAJ_T0011823.1 MGP_CBAJ_G0009935.1 mouse_genomes_project 1 31992321 31994182 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0022203.1 MGP_CBAJ_G0016307.1 mouse_genomes_project 1 158817914 158822710 - MGP_CBAJ_P0022203 Rgs2 protein_coding protein_coding MGP_CBAJ_T0022204.1 MGP_CBAJ_G0016307.1 mouse_genomes_project 1 158820256 158822684 - MGP_CBAJ_P0022204 Rgs2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022205.1 MGP_CBAJ_G0016307.1 mouse_genomes_project 1 158820459 158822581 - MGP_CBAJ_P0022205 Rgs2 protein_coding protein_coding MGP_CBAJ_T0022206.1 MGP_CBAJ_G0016307.1 mouse_genomes_project 1 158821092 158822670 - Rgs2 protein_coding retained_intron MGP_CBAJ_T0005582.1 MGP_CBAJ_G0004693.1 mouse_genomes_project 1 27741184 27771264 + lincRNA lincRNA MGP_CBAJ_T0023820.1 MGP_CBAJ_G0016661.1 mouse_genomes_project 1 209638675 209674931 - MGP_CBAJ_P0023820 Kctd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023821.1 MGP_CBAJ_G0016661.1 mouse_genomes_project 1 209638675 209674943 - MGP_CBAJ_P0023821 Kctd3 protein_coding protein_coding MGP_CBAJ_T0023822.1 MGP_CBAJ_G0016661.1 mouse_genomes_project 1 209639831 209642142 - Kctd3 protein_coding retained_intron MGP_CBAJ_T0023823.1 MGP_CBAJ_G0016661.1 mouse_genomes_project 1 209639944 209641760 - Kctd3 protein_coding retained_intron MGP_CBAJ_T0023824.1 MGP_CBAJ_G0016661.1 mouse_genomes_project 1 209640056 209646126 - MGP_CBAJ_P0023824 Kctd3 protein_coding protein_coding MGP_CBAJ_T0023825.1 MGP_CBAJ_G0016661.1 mouse_genomes_project 1 209640099 209641259 - Kctd3 protein_coding retained_intron MGP_CBAJ_T0023826.1 MGP_CBAJ_G0016661.1 mouse_genomes_project 1 209641320 209644139 - Kctd3 protein_coding processed_transcript MGP_CBAJ_T0023827.1 MGP_CBAJ_G0016661.1 mouse_genomes_project 1 209646076 209649334 - Kctd3 protein_coding retained_intron MGP_CBAJ_T0023828.1 MGP_CBAJ_G0016661.1 mouse_genomes_project 1 209648325 209674944 - Kctd3 protein_coding retained_intron MGP_CBAJ_T0023829.1 MGP_CBAJ_G0016661.1 mouse_genomes_project 1 209662388 209664814 - Kctd3 protein_coding retained_intron MGP_CBAJ_T0024050.1 MGP_CBAJ_G0016703.1 mouse_genomes_project 1 216346845 216380530 - MGP_CBAJ_P0024050 Cr1l protein_coding protein_coding MGP_CBAJ_T0024051.1 MGP_CBAJ_G0016703.1 mouse_genomes_project 1 216348122 216380509 - MGP_CBAJ_P0024051 Cr1l protein_coding protein_coding MGP_CBAJ_T0024052.1 MGP_CBAJ_G0016703.1 mouse_genomes_project 1 216352911 216356586 - Cr1l protein_coding retained_intron MGP_CBAJ_T0024053.1 MGP_CBAJ_G0016703.1 mouse_genomes_project 1 216353007 216380747 - MGP_CBAJ_P0024053 Cr1l protein_coding protein_coding MGP_CBAJ_T0024054.1 MGP_CBAJ_G0016703.1 mouse_genomes_project 1 216353013 216366827 - MGP_CBAJ_P0024054 Cr1l protein_coding protein_coding MGP_CBAJ_T0024055.1 MGP_CBAJ_G0016703.1 mouse_genomes_project 1 216363838 216378648 - Cr1l protein_coding retained_intron MGP_CBAJ_T0024056.1 MGP_CBAJ_G0016703.1 mouse_genomes_project 1 216363965 216380772 - MGP_CBAJ_P0024056 Cr1l protein_coding protein_coding MGP_CBAJ_T0024057.1 MGP_CBAJ_G0016703.1 mouse_genomes_project 1 216375100 216380720 - Cr1l protein_coding retained_intron MGP_CBAJ_T0024058.1 MGP_CBAJ_G0016703.1 mouse_genomes_project 1 216378379 216380516 - MGP_CBAJ_P0024058 Cr1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0024059.1 MGP_CBAJ_G0016703.1 mouse_genomes_project 1 216378831 216380541 - Cr1l protein_coding retained_intron MGP_CBAJ_T0012143.1 MGP_CBAJ_G0010255.1 mouse_genomes_project 1 166872632 166873574 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011977.1 MGP_CBAJ_G0010089.1 mouse_genomes_project 1 86582014 86582492 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011752.1 MGP_CBAJ_G0009864.1 mouse_genomes_project 1 7099871 7101785 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012008.1 MGP_CBAJ_G0010120.1 mouse_genomes_project 1 100721468 100721880 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023190.1 MGP_CBAJ_G0016501.1 mouse_genomes_project 1 189621818 189622313 + Tstd1 protein_coding processed_transcript MGP_CBAJ_T0023191.1 MGP_CBAJ_G0016501.1 mouse_genomes_project 1 189621979 189623299 + MGP_CBAJ_P0023191 Tstd1 protein_coding protein_coding MGP_CBAJ_T0023192.1 MGP_CBAJ_G0016501.1 mouse_genomes_project 1 189622665 189623298 + Tstd1 protein_coding retained_intron MGP_CBAJ_T0000765.1 MGP_CBAJ_G0000702.1 mouse_genomes_project 1 214381261 214386241 + TEC TEC MGP_CBAJ_T0005558.1 MGP_CBAJ_G0004674.1 mouse_genomes_project 1 5100504 5125056 + Gm30414 lincRNA lincRNA MGP_CBAJ_T0005739.1 MGP_CBAJ_G0004806.1 mouse_genomes_project 1 96795702 96805972 - Gm29337 lincRNA lincRNA MGP_CBAJ_T0009421.1 MGP_CBAJ_G0007559.1 mouse_genomes_project 1 170034535 170034646 + Mir8114 miRNA miRNA MGP_CBAJ_T0022999.1 MGP_CBAJ_G0016461.1 mouse_genomes_project 1 187663868 187670043 - MGP_CBAJ_P0022999 Rgs4 protein_coding protein_coding MGP_CBAJ_T0023000.1 MGP_CBAJ_G0016461.1 mouse_genomes_project 1 187663873 187670039 - MGP_CBAJ_P0023000 Rgs4 protein_coding protein_coding MGP_CBAJ_T0023001.1 MGP_CBAJ_G0016461.1 mouse_genomes_project 1 187666225 187670020 - Rgs4 protein_coding retained_intron MGP_CBAJ_T0021422.1 MGP_CBAJ_G0016138.1 mouse_genomes_project 1 131337017 131339841 + MGP_CBAJ_P0021422 Tmem185b protein_coding protein_coding MGP_CBAJ_T0021423.1 MGP_CBAJ_G0016138.1 mouse_genomes_project 1 131337030 131338087 + Tmem185b protein_coding processed_transcript MGP_CBAJ_T0098175.1 MGP_CBAJ_G0036448.1 mouse_genomes_project 1 140003759 140003889 + Gm23370 scaRNA scaRNA MGP_CBAJ_T0012089.1 MGP_CBAJ_G0010201.1 mouse_genomes_project 1 135506902 135507151 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016787.1 MGP_CBAJ_G0014853.1 mouse_genomes_project 1 151945291 151946425 + Gm4258 processed_transcript retained_intron MGP_CBAJ_T0016788.1 MGP_CBAJ_G0014853.1 mouse_genomes_project 1 151945294 152062649 + Gm4258 processed_transcript lincRNA MGP_CBAJ_T0005864.1 MGP_CBAJ_G0004910.1 mouse_genomes_project 1 171812547 171820631 - Gm5532 lincRNA lincRNA MGP_CBAJ_T0005865.1 MGP_CBAJ_G0004910.1 mouse_genomes_project 1 171818532 171820663 - Gm5532 lincRNA lincRNA MGP_CBAJ_T0012146.1 MGP_CBAJ_G0010258.1 mouse_genomes_project 1 167345982 167346223 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099807.1 MGP_CBAJ_G0038062.1 mouse_genomes_project 1 177565159 177565291 + Gm23528 snoRNA snoRNA MGP_CBAJ_T0000683.1 MGP_CBAJ_G0000623.1 mouse_genomes_project 1 177861293 177863048 + TEC TEC MGP_CBAJ_T0024060.1 MGP_CBAJ_G0016704.1 mouse_genomes_project 1 216387467 216430616 - MGP_CBAJ_P0024060 Cr2 protein_coding protein_coding MGP_CBAJ_T0024061.1 MGP_CBAJ_G0016704.1 mouse_genomes_project 1 216387467 216430615 - MGP_CBAJ_P0024061 Cr2 protein_coding protein_coding MGP_CBAJ_T0024062.1 MGP_CBAJ_G0016704.1 mouse_genomes_project 1 216387473 216413791 - MGP_CBAJ_P0024062 Cr2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024063.1 MGP_CBAJ_G0016704.1 mouse_genomes_project 1 216389975 216408275 - Cr2 protein_coding retained_intron MGP_CBAJ_T0024064.1 MGP_CBAJ_G0016704.1 mouse_genomes_project 1 216390321 216403207 - MGP_CBAJ_P0024064 Cr2 protein_coding protein_coding MGP_CBAJ_T0024065.1 MGP_CBAJ_G0016704.1 mouse_genomes_project 1 216390341 216430548 - MGP_CBAJ_P0024065 Cr2 protein_coding protein_coding MGP_CBAJ_T0024066.1 MGP_CBAJ_G0016704.1 mouse_genomes_project 1 216391420 216408366 - Cr2 protein_coding retained_intron MGP_CBAJ_T0024067.1 MGP_CBAJ_G0016704.1 mouse_genomes_project 1 216391846 216430510 - MGP_CBAJ_P0024067 Cr2 protein_coding unknown_likely_coding MGP_CBAJ_T0024068.1 MGP_CBAJ_G0016704.1 mouse_genomes_project 1 216417071 216422291 - Cr2 protein_coding processed_transcript MGP_CBAJ_T0024069.1 MGP_CBAJ_G0016704.1 mouse_genomes_project 1 216419618 216425042 - MGP_CBAJ_P0024069 Cr2 protein_coding protein_coding MGP_CBAJ_T0024070.1 MGP_CBAJ_G0016704.1 mouse_genomes_project 1 216419705 216430615 - Cr2 protein_coding processed_transcript MGP_CBAJ_T0024071.1 MGP_CBAJ_G0016704.1 mouse_genomes_project 1 216424518 216430615 - Cr2 protein_coding processed_transcript MGP_CBAJ_T0021335.1 MGP_CBAJ_G0016119.1 mouse_genomes_project 1 117646735 117659732 + MGP_CBAJ_P0021335 Serpinb11 protein_coding protein_coding MGP_CBAJ_T0021336.1 MGP_CBAJ_G0016119.1 mouse_genomes_project 1 117647466 117666039 + MGP_CBAJ_P0021336 Serpinb11 protein_coding protein_coding MGP_CBAJ_T0000419.1 MGP_CBAJ_G0000361.1 mouse_genomes_project 1 40126320 40126824 + TEC TEC MGP_CBAJ_T0098238.1 MGP_CBAJ_G0036510.1 mouse_genomes_project 1 115624905 115625358 - Gm28404 sense_intronic sense_intronic MGP_CBAJ_T0000665.1 MGP_CBAJ_G0000605.1 mouse_genomes_project 1 173889759 173890936 - TEC TEC MGP_CBAJ_T0019380.1 MGP_CBAJ_G0015735.1 mouse_genomes_project 1 47507404 47520946 + Col3a1 protein_coding retained_intron MGP_CBAJ_T0019381.1 MGP_CBAJ_G0015735.1 mouse_genomes_project 1 47507404 47545210 + MGP_CBAJ_P0019381 Col3a1 protein_coding protein_coding MGP_CBAJ_T0019382.1 MGP_CBAJ_G0015735.1 mouse_genomes_project 1 47507513 47512862 + Col3a1 protein_coding processed_transcript MGP_CBAJ_T0019383.1 MGP_CBAJ_G0015735.1 mouse_genomes_project 1 47523516 47524822 + Col3a1 protein_coding retained_intron MGP_CBAJ_T0019384.1 MGP_CBAJ_G0015735.1 mouse_genomes_project 1 47529821 47532919 + Col3a1 protein_coding retained_intron MGP_CBAJ_T0019385.1 MGP_CBAJ_G0015735.1 mouse_genomes_project 1 47531387 47536246 + MGP_CBAJ_P0019385 Col3a1 protein_coding protein_coding MGP_CBAJ_T0019386.1 MGP_CBAJ_G0015735.1 mouse_genomes_project 1 47535527 47543271 + MGP_CBAJ_P0019386 Col3a1 protein_coding protein_coding MGP_CBAJ_T0019163.1 MGP_CBAJ_G0015689.1 mouse_genomes_project 1 39238747 39241042 - Lyg1 protein_coding processed_transcript MGP_CBAJ_T0019164.1 MGP_CBAJ_G0015689.1 mouse_genomes_project 1 39238747 39249792 - MGP_CBAJ_P0019164 Lyg1 protein_coding protein_coding MGP_CBAJ_T0019165.1 MGP_CBAJ_G0015689.1 mouse_genomes_project 1 39238749 39249792 - MGP_CBAJ_P0019165 Lyg1 protein_coding protein_coding MGP_CBAJ_T0101248.1 MGP_CBAJ_G0039386.1 mouse_genomes_project 1 106438794 106556700 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0000465.1 MGP_CBAJ_G0000407.1 mouse_genomes_project 1 71778001 71779750 - TEC TEC MGP_CBAJ_T0021470.1 MGP_CBAJ_G0016150.1 mouse_genomes_project 1 132564967 132570549 + MGP_CBAJ_P0021470 En1 protein_coding protein_coding MGP_CBAJ_T0098583.1 MGP_CBAJ_G0036838.1 mouse_genomes_project 1 188904651 188904758 - Gm25235 snRNA snRNA MGP_CBAJ_T0023758.1 MGP_CBAJ_G0016648.1 mouse_genomes_project 1 205423654 205531183 + MGP_CBAJ_P0023758 Rab3gap2 protein_coding protein_coding MGP_CBAJ_T0023759.1 MGP_CBAJ_G0016648.1 mouse_genomes_project 1 205423654 205533757 + MGP_CBAJ_P0023759 Rab3gap2 protein_coding protein_coding MGP_CBAJ_T0023760.1 MGP_CBAJ_G0016648.1 mouse_genomes_project 1 205423715 205425990 + Rab3gap2 protein_coding retained_intron MGP_CBAJ_T0023761.1 MGP_CBAJ_G0016648.1 mouse_genomes_project 1 205501992 205533742 + Rab3gap2 protein_coding retained_intron MGP_CBAJ_T0023762.1 MGP_CBAJ_G0016648.1 mouse_genomes_project 1 205502155 205531721 + Rab3gap2 protein_coding retained_intron MGP_CBAJ_T0023763.1 MGP_CBAJ_G0016648.1 mouse_genomes_project 1 205524688 205528586 + Rab3gap2 protein_coding retained_intron MGP_CBAJ_T0098533.1 MGP_CBAJ_G0036788.1 mouse_genomes_project 1 68000701 68000805 - Gm23448 snRNA snRNA MGP_CBAJ_T0011883.1 MGP_CBAJ_G0009995.1 mouse_genomes_project 1 51594577 51598068 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005787.1 MGP_CBAJ_G0004848.1 mouse_genomes_project 1 131074687 131098126 - Gm29456 lincRNA lincRNA MGP_CBAJ_T0005904.1 MGP_CBAJ_G0004941.1 mouse_genomes_project 1 189076130 189080653 + Gm10522 lincRNA lincRNA MGP_CBAJ_T0011754.1 MGP_CBAJ_G0009866.1 mouse_genomes_project 1 7164715 7165885 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0023068.1 MGP_CBAJ_G0016480.1 mouse_genomes_project 1 189274712 189293714 + MGP_CBAJ_P0023068 Cfap126 protein_coding protein_coding MGP_CBAJ_T0023069.1 MGP_CBAJ_G0016480.1 mouse_genomes_project 1 189274783 189293664 + MGP_CBAJ_P0023069 Cfap126 protein_coding protein_coding MGP_CBAJ_T0023070.1 MGP_CBAJ_G0016480.1 mouse_genomes_project 1 189284964 189293852 + MGP_CBAJ_P0023070 Cfap126 protein_coding protein_coding MGP_CBAJ_T0023071.1 MGP_CBAJ_G0016480.1 mouse_genomes_project 1 189284967 189286442 + Cfap126 protein_coding processed_transcript MGP_CBAJ_T0023072.1 MGP_CBAJ_G0016480.1 mouse_genomes_project 1 189285962 189292923 + MGP_CBAJ_P0023072 Cfap126 protein_coding protein_coding MGP_CBAJ_T0023073.1 MGP_CBAJ_G0016480.1 mouse_genomes_project 1 189286435 189293827 + MGP_CBAJ_P0023073 Cfap126 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023074.1 MGP_CBAJ_G0016480.1 mouse_genomes_project 1 189286459 189292967 + MGP_CBAJ_P0023074 Cfap126 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023075.1 MGP_CBAJ_G0016480.1 mouse_genomes_project 1 189291941 189293544 + MGP_CBAJ_P0023075 Cfap126 protein_coding protein_coding MGP_CBAJ_T0000689.1 MGP_CBAJ_G0000629.1 mouse_genomes_project 1 179649566 179651830 + TEC TEC MGP_CBAJ_T0012148.1 MGP_CBAJ_G0010260.1 mouse_genomes_project 1 168332166 168332618 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011934.1 MGP_CBAJ_G0010046.1 mouse_genomes_project 1 66539703 66539981 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000443.1 MGP_CBAJ_G0000385.1 mouse_genomes_project 1 59681386 59681739 - TEC TEC MGP_CBAJ_T0012189.1 MGP_CBAJ_G0010301.1 mouse_genomes_project 1 187499430 187500586 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000430.1 MGP_CBAJ_G0000372.1 mouse_genomes_project 1 47716605 47723812 - TEC TEC MGP_CBAJ_T0022537.1 MGP_CBAJ_G0016369.1 mouse_genomes_project 1 173251774 173403377 - MGP_CBAJ_P0022537 Ralgps2 protein_coding protein_coding MGP_CBAJ_T0022538.1 MGP_CBAJ_G0016369.1 mouse_genomes_project 1 173254354 173403318 - MGP_CBAJ_P0022538 Ralgps2 protein_coding protein_coding MGP_CBAJ_T0022539.1 MGP_CBAJ_G0016369.1 mouse_genomes_project 1 173254354 173403374 - MGP_CBAJ_P0022539 Ralgps2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022540.1 MGP_CBAJ_G0016369.1 mouse_genomes_project 1 173255297 173403162 - MGP_CBAJ_P0022540 Ralgps2 protein_coding protein_coding MGP_CBAJ_T0022541.1 MGP_CBAJ_G0016369.1 mouse_genomes_project 1 173255703 173403306 - MGP_CBAJ_P0022541 Ralgps2 protein_coding protein_coding MGP_CBAJ_T0022542.1 MGP_CBAJ_G0016369.1 mouse_genomes_project 1 173255709 173403383 - MGP_CBAJ_P0022542 Ralgps2 protein_coding protein_coding MGP_CBAJ_T0022543.1 MGP_CBAJ_G0016369.1 mouse_genomes_project 1 173256417 173263582 - Ralgps2 protein_coding retained_intron MGP_CBAJ_T0022544.1 MGP_CBAJ_G0016369.1 mouse_genomes_project 1 173263094 173403401 - MGP_CBAJ_P0022544 Ralgps2 protein_coding protein_coding MGP_CBAJ_T0022545.1 MGP_CBAJ_G0016369.1 mouse_genomes_project 1 173266518 173403342 - MGP_CBAJ_P0022545 Ralgps2 protein_coding protein_coding MGP_CBAJ_T0022546.1 MGP_CBAJ_G0016369.1 mouse_genomes_project 1 173268870 173403368 - MGP_CBAJ_P0022546 Ralgps2 protein_coding protein_coding MGP_CBAJ_T0022547.1 MGP_CBAJ_G0016369.1 mouse_genomes_project 1 173268889 173402593 - MGP_CBAJ_P0022547 Ralgps2 protein_coding protein_coding MGP_CBAJ_T0022548.1 MGP_CBAJ_G0016369.1 mouse_genomes_project 1 173278471 173280823 - Ralgps2 protein_coding retained_intron MGP_CBAJ_T0022549.1 MGP_CBAJ_G0016369.1 mouse_genomes_project 1 173278525 173282667 - Ralgps2 protein_coding retained_intron MGP_CBAJ_T0022552.1 MGP_CBAJ_G0016369.1 mouse_genomes_project 1 173341065 173402909 - MGP_CBAJ_P0022552 Ralgps2 protein_coding protein_coding MGP_CBAJ_T0022553.1 MGP_CBAJ_G0016369.1 mouse_genomes_project 1 173354586 173402556 - MGP_CBAJ_P0022553 Ralgps2 protein_coding protein_coding MGP_CBAJ_T0002705.1 MGP_CBAJ_G0002574.1 mouse_genomes_project 1 35464477 35464986 - 1700101I19Rik antisense antisense MGP_CBAJ_T0002706.1 MGP_CBAJ_G0002574.1 mouse_genomes_project 1 35464499 35464888 - 1700101I19Rik antisense antisense MGP_CBAJ_T0019677.1 MGP_CBAJ_G0015791.1 mouse_genomes_project 1 62376424 62392033 + MGP_CBAJ_P0019677 Bzw1 protein_coding protein_coding MGP_CBAJ_T0019678.1 MGP_CBAJ_G0015791.1 mouse_genomes_project 1 62376584 62386468 + MGP_CBAJ_P0019678 Bzw1 protein_coding protein_coding MGP_CBAJ_T0019679.1 MGP_CBAJ_G0015791.1 mouse_genomes_project 1 62376592 62390148 + MGP_CBAJ_P0019679 Bzw1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0011788.1 MGP_CBAJ_G0009900.1 mouse_genomes_project 1 20380715 20415147 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0023049.1 MGP_CBAJ_G0016475.1 mouse_genomes_project 1 188992145 188998021 - MGP_CBAJ_P0023049 Fcrlb protein_coding protein_coding MGP_CBAJ_T0002746.1 MGP_CBAJ_G0002606.1 mouse_genomes_project 1 63782205 63802444 - Gm28411 antisense antisense MGP_CBAJ_T0002748.1 MGP_CBAJ_G0002606.1 mouse_genomes_project 1 63793956 63803177 - Gm28411 antisense antisense MGP_CBAJ_T0021662.1 MGP_CBAJ_G0016193.1 mouse_genomes_project 1 144489607 144500398 - Ikbke protein_coding retained_intron MGP_CBAJ_T0021663.1 MGP_CBAJ_G0016193.1 mouse_genomes_project 1 144489861 144517553 - MGP_CBAJ_P0021663 Ikbke protein_coding protein_coding MGP_CBAJ_T0021664.1 MGP_CBAJ_G0016193.1 mouse_genomes_project 1 144489866 144514894 - MGP_CBAJ_P0021664 Ikbke protein_coding protein_coding MGP_CBAJ_T0021665.1 MGP_CBAJ_G0016193.1 mouse_genomes_project 1 144494284 144501583 - Ikbke protein_coding retained_intron MGP_CBAJ_T0021666.1 MGP_CBAJ_G0016193.1 mouse_genomes_project 1 144498605 144505835 - Ikbke protein_coding retained_intron MGP_CBAJ_T0021667.1 MGP_CBAJ_G0016193.1 mouse_genomes_project 1 144506191 144507836 - Ikbke protein_coding retained_intron MGP_CBAJ_T0021668.1 MGP_CBAJ_G0016193.1 mouse_genomes_project 1 144509085 144514656 - MGP_CBAJ_P0021668 Ikbke protein_coding protein_coding MGP_CBAJ_T0098561.1 MGP_CBAJ_G0036816.1 mouse_genomes_project 1 136902040 136902144 + Gm25578 snRNA snRNA MGP_CBAJ_T0021008.1 MGP_CBAJ_G0016046.1 mouse_genomes_project 1 99482792 99508536 + MGP_CBAJ_P0021008 Scly protein_coding protein_coding MGP_CBAJ_T0021009.1 MGP_CBAJ_G0016046.1 mouse_genomes_project 1 99482814 99487957 + Scly protein_coding retained_intron MGP_CBAJ_T0021010.1 MGP_CBAJ_G0016046.1 mouse_genomes_project 1 99482822 99493155 + MGP_CBAJ_P0021010 Scly protein_coding protein_coding MGP_CBAJ_T0021011.1 MGP_CBAJ_G0016046.1 mouse_genomes_project 1 99482823 99494263 + MGP_CBAJ_P0021011 Scly protein_coding nonsense_mediated_decay MGP_CBAJ_T0021012.1 MGP_CBAJ_G0016046.1 mouse_genomes_project 1 99482824 99495742 + Scly protein_coding retained_intron MGP_CBAJ_T0021013.1 MGP_CBAJ_G0016046.1 mouse_genomes_project 1 99482858 99493121 + MGP_CBAJ_P0021013 Scly protein_coding protein_coding MGP_CBAJ_T0021014.1 MGP_CBAJ_G0016046.1 mouse_genomes_project 1 99482861 99493227 + MGP_CBAJ_P0021014 Scly protein_coding protein_coding MGP_CBAJ_T0021015.1 MGP_CBAJ_G0016046.1 mouse_genomes_project 1 99482881 99489882 + Scly protein_coding processed_transcript MGP_CBAJ_T0021016.1 MGP_CBAJ_G0016046.1 mouse_genomes_project 1 99484376 99487315 + MGP_CBAJ_P0021016 Scly protein_coding protein_coding MGP_CBAJ_T0021017.1 MGP_CBAJ_G0016046.1 mouse_genomes_project 1 99487242 99494284 + MGP_CBAJ_P0021017 Scly protein_coding protein_coding MGP_CBAJ_T0012194.1 MGP_CBAJ_G0010306.1 mouse_genomes_project 1 190381872 190382202 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0023810.1 MGP_CBAJ_G0016659.1 mouse_genomes_project 1 208116500 208610607 + MGP_CBAJ_P0023810 Esrrg protein_coding protein_coding MGP_CBAJ_T0023811.1 MGP_CBAJ_G0016659.1 mouse_genomes_project 1 208116738 208795036 + MGP_CBAJ_P0023811 Esrrg protein_coding protein_coding MGP_CBAJ_T0023812.1 MGP_CBAJ_G0016659.1 mouse_genomes_project 1 208117404 208327402 + Esrrg protein_coding processed_transcript MGP_CBAJ_T0023813.1 MGP_CBAJ_G0016659.1 mouse_genomes_project 1 208559715 208795535 + MGP_CBAJ_P0023813 Esrrg protein_coding protein_coding MGP_CBAJ_T0023814.1 MGP_CBAJ_G0016659.1 mouse_genomes_project 1 208559756 208795534 + MGP_CBAJ_P0023814 Esrrg protein_coding protein_coding MGP_CBAJ_T0002698.1 MGP_CBAJ_G0002567.1 mouse_genomes_project 1 16317315 16386728 - Gm28153 antisense antisense MGP_CBAJ_T0020753.1 MGP_CBAJ_G0015987.1 mouse_genomes_project 1 93705407 93707283 + B3gnt7 protein_coding retained_intron MGP_CBAJ_T0020754.1 MGP_CBAJ_G0015987.1 mouse_genomes_project 1 93705809 93709881 + MGP_CBAJ_P0020754 B3gnt7 protein_coding protein_coding MGP_CBAJ_T0020755.1 MGP_CBAJ_G0015987.1 mouse_genomes_project 1 93706106 93708425 + MGP_CBAJ_P0020755 B3gnt7 protein_coding protein_coding MGP_CBAJ_T0099771.1 MGP_CBAJ_G0038026.1 mouse_genomes_project 1 86094692 86094818 - Gm24160 snoRNA snoRNA MGP_CBAJ_T0098551.1 MGP_CBAJ_G0036806.1 mouse_genomes_project 1 105584899 105585006 + Gm26245 snRNA snRNA MGP_CBAJ_T0021433.1 MGP_CBAJ_G0016140.1 mouse_genomes_project 1 131471206 131667411 - MGP_CBAJ_P0021433 Ptpn4 protein_coding protein_coding MGP_CBAJ_T0021434.1 MGP_CBAJ_G0016140.1 mouse_genomes_project 1 131476783 131507852 - MGP_CBAJ_P0021434 Ptpn4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021435.1 MGP_CBAJ_G0016140.1 mouse_genomes_project 1 131509873 131667145 - MGP_CBAJ_P0021435 Ptpn4 protein_coding protein_coding MGP_CBAJ_T0021436.1 MGP_CBAJ_G0016140.1 mouse_genomes_project 1 131512896 131566747 - MGP_CBAJ_P0021436 Ptpn4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021437.1 MGP_CBAJ_G0016140.1 mouse_genomes_project 1 131526503 131537298 - Ptpn4 protein_coding retained_intron MGP_CBAJ_T0021438.1 MGP_CBAJ_G0016140.1 mouse_genomes_project 1 131547399 131609451 - MGP_CBAJ_P0021438 Ptpn4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021439.1 MGP_CBAJ_G0016140.1 mouse_genomes_project 1 131568715 131632235 - MGP_CBAJ_P0021439 Ptpn4 protein_coding protein_coding MGP_CBAJ_T0021440.1 MGP_CBAJ_G0016140.1 mouse_genomes_project 1 131591238 131666869 - MGP_CBAJ_P0021440 Ptpn4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021441.1 MGP_CBAJ_G0016140.1 mouse_genomes_project 1 131591578 131666869 - MGP_CBAJ_P0021441 Ptpn4 protein_coding protein_coding MGP_CBAJ_T0021442.1 MGP_CBAJ_G0016140.1 mouse_genomes_project 1 131598915 131632255 - MGP_CBAJ_P0021442 Ptpn4 protein_coding protein_coding MGP_CBAJ_T0021443.1 MGP_CBAJ_G0016140.1 mouse_genomes_project 1 131598975 131666797 - MGP_CBAJ_P0021443 Ptpn4 protein_coding protein_coding MGP_CBAJ_T0002912.1 MGP_CBAJ_G0002735.1 mouse_genomes_project 1 208572181 208574597 - 9330162B11Rik antisense antisense MGP_CBAJ_T0101498.1 MGP_CBAJ_G0039530.1 mouse_genomes_project 1 192610084 192611802 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0019952.1 MGP_CBAJ_G0015835.1 mouse_genomes_project 1 68553249 68571648 - MGP_CBAJ_P0019952 4933402D24Rik protein_coding protein_coding MGP_CBAJ_T0005726.1 MGP_CBAJ_G0004795.1 mouse_genomes_project 1 89760394 89760930 + Gm28942 lincRNA lincRNA MGP_CBAJ_T0021888.1 MGP_CBAJ_G0016242.1 mouse_genomes_project 1 147806839 147814633 + MGP_CBAJ_P0021888 Mybph protein_coding protein_coding MGP_CBAJ_T0021889.1 MGP_CBAJ_G0016242.1 mouse_genomes_project 1 147806848 147814634 + MGP_CBAJ_P0021889 Mybph protein_coding protein_coding MGP_CBAJ_T0012190.1 MGP_CBAJ_G0010302.1 mouse_genomes_project 1 189027158 189027453 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011796.1 MGP_CBAJ_G0009908.1 mouse_genomes_project 1 22234896 22237026 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099784.1 MGP_CBAJ_G0038039.1 mouse_genomes_project 1 112993595 112993737 - Gm23965 snoRNA snoRNA MGP_CBAJ_T0018443.1 MGP_CBAJ_G0015551.1 mouse_genomes_project 1 277824 288290 - Xkr4 protein_coding processed_transcript MGP_CBAJ_T0018444.1 MGP_CBAJ_G0015551.1 mouse_genomes_project 1 278446 287578 - Xkr4 protein_coding processed_transcript MGP_CBAJ_T0018445.1 MGP_CBAJ_G0015551.1 mouse_genomes_project 1 286427 769113 - MGP_CBAJ_P0018445 Xkr4 protein_coding protein_coding MGP_CBAJ_T0019253.1 MGP_CBAJ_G0015707.1 mouse_genomes_project 1 41634124 41681159 + MGP_CBAJ_P0019253 Il1r2 protein_coding protein_coding MGP_CBAJ_T0019254.1 MGP_CBAJ_G0015707.1 mouse_genomes_project 1 41648101 41702042 + MGP_CBAJ_P0019254 Il1r2 protein_coding protein_coding MGP_CBAJ_T0019255.1 MGP_CBAJ_G0015707.1 mouse_genomes_project 1 41648195 41702030 + MGP_CBAJ_P0019255 Il1r2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019256.1 MGP_CBAJ_G0015707.1 mouse_genomes_project 1 41649388 41671459 + MGP_CBAJ_P0019256 Il1r2 protein_coding protein_coding MGP_CBAJ_T0022495.1 MGP_CBAJ_G0016361.1 mouse_genomes_project 1 172421006 172519738 - MGP_CBAJ_P0022495 Fam163a protein_coding protein_coding MGP_CBAJ_T0011988.1 MGP_CBAJ_G0010100.1 mouse_genomes_project 1 90068911 90069283 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101439.1 MGP_CBAJ_G0039471.1 mouse_genomes_project 1 16575441 16582999 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0005848.1 MGP_CBAJ_G0004897.1 mouse_genomes_project 1 165826427 165834422 - Ptgs2os2 lincRNA lincRNA MGP_CBAJ_T0021445.1 MGP_CBAJ_G0016142.1 mouse_genomes_project 1 131780124 131861236 - MGP_CBAJ_P0021445 Cfap221 protein_coding protein_coding MGP_CBAJ_T0021446.1 MGP_CBAJ_G0016142.1 mouse_genomes_project 1 131780302 131859262 - MGP_CBAJ_P0021446 Cfap221 protein_coding protein_coding MGP_CBAJ_T0021447.1 MGP_CBAJ_G0016142.1 mouse_genomes_project 1 131823853 131861280 - MGP_CBAJ_P0021447 Cfap221 protein_coding protein_coding MGP_CBAJ_T0000754.1 MGP_CBAJ_G0000692.1 mouse_genomes_project 1 208735890 208738327 + TEC TEC MGP_CBAJ_T0099812.1 MGP_CBAJ_G0038067.1 mouse_genomes_project 1 178016124 178016185 + Gm23212 snoRNA snoRNA MGP_CBAJ_T0000573.1 MGP_CBAJ_G0000515.1 mouse_genomes_project 1 138569141 138570463 - TEC TEC MGP_CBAJ_T0012018.1 MGP_CBAJ_G0010130.1 mouse_genomes_project 1 107420437 107420725 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012175.1 MGP_CBAJ_G0010287.1 mouse_genomes_project 1 181528745 181529097 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002704.1 MGP_CBAJ_G0002573.1 mouse_genomes_project 1 35275738 35280960 - Gm28306 antisense antisense MGP_CBAJ_T0000420.1 MGP_CBAJ_G0000362.1 mouse_genomes_project 1 40421479 40423118 + TEC TEC MGP_CBAJ_T0012221.1 MGP_CBAJ_G0010333.1 mouse_genomes_project 1 210438657 210438798 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012028.1 MGP_CBAJ_G0010140.1 mouse_genomes_project 1 110946796 110947501 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002751.1 MGP_CBAJ_G0002609.1 mouse_genomes_project 1 66705330 66710245 - Pard3bos2 antisense antisense MGP_CBAJ_T0000652.1 MGP_CBAJ_G0000592.1 mouse_genomes_project 1 169801151 169803067 + TEC TEC MGP_CBAJ_T0009431.1 MGP_CBAJ_G0007569.1 mouse_genomes_project 1 185036317 185036374 - miRNA miRNA MGP_CBAJ_T0011970.1 MGP_CBAJ_G0010082.1 mouse_genomes_project 1 81660079 81660427 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005897.1 MGP_CBAJ_G0004935.1 mouse_genomes_project 1 184623089 184646401 - Gm16701 lincRNA lincRNA MGP_CBAJ_T0098584.1 MGP_CBAJ_G0036839.1 mouse_genomes_project 1 189131809 189132088 + Gm26110 snRNA snRNA MGP_CBAJ_T0022788.1 MGP_CBAJ_G0016411.1 mouse_genomes_project 1 180517417 180586586 - MGP_CBAJ_P0022788 Prrx1 protein_coding protein_coding MGP_CBAJ_T0022789.1 MGP_CBAJ_G0016411.1 mouse_genomes_project 1 180517417 180586548 - MGP_CBAJ_P0022789 Prrx1 protein_coding protein_coding MGP_CBAJ_T0022790.1 MGP_CBAJ_G0016411.1 mouse_genomes_project 1 180519869 180560828 - Prrx1 protein_coding processed_transcript MGP_CBAJ_T0022791.1 MGP_CBAJ_G0016411.1 mouse_genomes_project 1 180525140 180586544 - MGP_CBAJ_P0022791 Prrx1 protein_coding protein_coding MGP_CBAJ_T0022792.1 MGP_CBAJ_G0016411.1 mouse_genomes_project 1 180554412 180586547 - Prrx1 protein_coding retained_intron MGP_CBAJ_T0020338.1 MGP_CBAJ_G0015915.1 mouse_genomes_project 1 81239610 81242588 + Zfand2b protein_coding retained_intron MGP_CBAJ_T0020339.1 MGP_CBAJ_G0015915.1 mouse_genomes_project 1 81239610 81242592 + MGP_CBAJ_P0020339 Zfand2b protein_coding protein_coding MGP_CBAJ_T0020340.1 MGP_CBAJ_G0015915.1 mouse_genomes_project 1 81239610 81241715 + MGP_CBAJ_P0020340 Zfand2b protein_coding protein_coding MGP_CBAJ_T0020341.1 MGP_CBAJ_G0015915.1 mouse_genomes_project 1 81239619 81242588 + MGP_CBAJ_P0020341 Zfand2b protein_coding protein_coding MGP_CBAJ_T0020342.1 MGP_CBAJ_G0015915.1 mouse_genomes_project 1 81239622 81240855 + Zfand2b protein_coding retained_intron MGP_CBAJ_T0020343.1 MGP_CBAJ_G0015915.1 mouse_genomes_project 1 81239630 81240594 + Zfand2b protein_coding retained_intron MGP_CBAJ_T0020344.1 MGP_CBAJ_G0015915.1 mouse_genomes_project 1 81239665 81241532 + Zfand2b protein_coding retained_intron MGP_CBAJ_T0020345.1 MGP_CBAJ_G0015915.1 mouse_genomes_project 1 81239742 81241650 + Zfand2b protein_coding retained_intron MGP_CBAJ_T0020346.1 MGP_CBAJ_G0015915.1 mouse_genomes_project 1 81239892 81242365 + MGP_CBAJ_P0020346 Zfand2b protein_coding protein_coding MGP_CBAJ_T0005559.1 MGP_CBAJ_G0004675.1 mouse_genomes_project 1 7363761 7365175 - Gm29520 lincRNA lincRNA MGP_CBAJ_T0012203.1 MGP_CBAJ_G0010315.1 mouse_genomes_project 1 199080725 199081244 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002852.1 MGP_CBAJ_G0002685.1 mouse_genomes_project 1 173403612 173403971 + 4930439D14Rik antisense antisense MGP_CBAJ_T0023990.1 MGP_CBAJ_G0016693.1 mouse_genomes_project 1 214241227 214260143 + MGP_CBAJ_P0023990 Irf6 protein_coding protein_coding MGP_CBAJ_T0023991.1 MGP_CBAJ_G0016693.1 mouse_genomes_project 1 214241270 214254987 + Irf6 protein_coding retained_intron MGP_CBAJ_T0023992.1 MGP_CBAJ_G0016693.1 mouse_genomes_project 1 214244797 214252300 + Irf6 protein_coding retained_intron MGP_CBAJ_T0023994.1 MGP_CBAJ_G0016693.1 mouse_genomes_project 1 214256621 214257608 + Irf6 protein_coding retained_intron MGP_CBAJ_T0000745.1 MGP_CBAJ_G0000683.1 mouse_genomes_project 1 205583482 205585912 + TEC TEC MGP_CBAJ_T0022856.1 MGP_CBAJ_G0016430.1 mouse_genomes_project 1 182645865 182665954 - MGP_CBAJ_P0022856 Sft2d2 protein_coding protein_coding MGP_CBAJ_T0022857.1 MGP_CBAJ_G0016430.1 mouse_genomes_project 1 182647399 182665837 - MGP_CBAJ_P0022857 Sft2d2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022858.1 MGP_CBAJ_G0016430.1 mouse_genomes_project 1 182650766 182665833 - MGP_CBAJ_P0022858 Sft2d2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023358.1 MGP_CBAJ_G0016550.1 mouse_genomes_project 1 192460840 192480441 - MGP_CBAJ_P0023358 AI607873 protein_coding protein_coding MGP_CBAJ_T0023359.1 MGP_CBAJ_G0016550.1 mouse_genomes_project 1 192461093 192480377 - MGP_CBAJ_P0023359 AI607873 protein_coding protein_coding MGP_CBAJ_T0002930.1 MGP_CBAJ_G0002746.1 mouse_genomes_project 1 213091688 213101611 + Gm26879 antisense antisense MGP_CBAJ_T0023252.1 MGP_CBAJ_G0016517.1 mouse_genomes_project 1 190456379 190513949 + MGP_CBAJ_P0023252 Dcaf8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023253.1 MGP_CBAJ_G0016517.1 mouse_genomes_project 1 190456384 190508087 + Dcaf8 protein_coding retained_intron MGP_CBAJ_T0023254.1 MGP_CBAJ_G0016517.1 mouse_genomes_project 1 190456413 190514661 + MGP_CBAJ_P0023254 Dcaf8 protein_coding protein_coding MGP_CBAJ_T0023255.1 MGP_CBAJ_G0016517.1 mouse_genomes_project 1 190456435 190509314 + Dcaf8 protein_coding retained_intron MGP_CBAJ_T0023256.1 MGP_CBAJ_G0016517.1 mouse_genomes_project 1 190456437 190514620 + MGP_CBAJ_P0023256 Dcaf8 protein_coding protein_coding MGP_CBAJ_T0023257.1 MGP_CBAJ_G0016517.1 mouse_genomes_project 1 190456473 190515543 + MGP_CBAJ_P0023257 Dcaf8 protein_coding protein_coding MGP_CBAJ_T0023258.1 MGP_CBAJ_G0016517.1 mouse_genomes_project 1 190457240 190509314 + Dcaf8 protein_coding retained_intron MGP_CBAJ_T0023259.1 MGP_CBAJ_G0016517.1 mouse_genomes_project 1 190486919 190489170 + Dcaf8 protein_coding retained_intron MGP_CBAJ_T0023260.1 MGP_CBAJ_G0016517.1 mouse_genomes_project 1 190487023 190512078 + MGP_CBAJ_P0023260 Dcaf8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023261.1 MGP_CBAJ_G0016517.1 mouse_genomes_project 1 190491234 190498735 + Dcaf8 protein_coding retained_intron MGP_CBAJ_T0023262.1 MGP_CBAJ_G0016517.1 mouse_genomes_project 1 190506886 190516160 + MGP_CBAJ_P0023262 Dcaf8 protein_coding protein_coding MGP_CBAJ_T0011140.1 MGP_CBAJ_G0009278.1 mouse_genomes_project 1 216515953 216516051 - Gm27940 misc_RNA misc_RNA MGP_CBAJ_T0020797.1 MGP_CBAJ_G0016001.1 mouse_genomes_project 1 94735577 94736737 + Chrnd protein_coding retained_intron MGP_CBAJ_T0020798.1 MGP_CBAJ_G0016001.1 mouse_genomes_project 1 94735607 94745815 + MGP_CBAJ_P0020798 Chrnd protein_coding protein_coding MGP_CBAJ_T0020799.1 MGP_CBAJ_G0016001.1 mouse_genomes_project 1 94735814 94745814 + MGP_CBAJ_P0020799 Chrnd protein_coding protein_coding MGP_CBAJ_T0021158.1 MGP_CBAJ_G0016080.1 mouse_genomes_project 1 101771745 101803956 + MGP_CBAJ_P0021158 Ppp1r7 protein_coding protein_coding MGP_CBAJ_T0021159.1 MGP_CBAJ_G0016080.1 mouse_genomes_project 1 101772546 101781515 + MGP_CBAJ_P0021159 Ppp1r7 protein_coding protein_coding MGP_CBAJ_T0021160.1 MGP_CBAJ_G0016080.1 mouse_genomes_project 1 101772598 101781446 + MGP_CBAJ_P0021160 Ppp1r7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0000711.1 MGP_CBAJ_G0000651.1 mouse_genomes_project 1 195002445 195004089 - TEC TEC MGP_CBAJ_T0018750.1 MGP_CBAJ_G0015604.1 mouse_genomes_project 1 15453702 15502279 - MGP_CBAJ_P0018750 Jph1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018751.1 MGP_CBAJ_G0015604.1 mouse_genomes_project 1 15493071 15605780 - MGP_CBAJ_P0018751 Jph1 protein_coding protein_coding MGP_CBAJ_T0020197.1 MGP_CBAJ_G0015888.1 mouse_genomes_project 1 80304219 80306786 + MGP_CBAJ_P0020197 Pnkd protein_coding protein_coding MGP_CBAJ_T0020198.1 MGP_CBAJ_G0015888.1 mouse_genomes_project 1 80304334 80386217 + MGP_CBAJ_P0020198 Pnkd protein_coding protein_coding MGP_CBAJ_T0020199.1 MGP_CBAJ_G0015888.1 mouse_genomes_project 1 80304339 80305966 + Pnkd protein_coding retained_intron MGP_CBAJ_T0020200.1 MGP_CBAJ_G0015888.1 mouse_genomes_project 1 80304343 80380088 + Pnkd protein_coding retained_intron MGP_CBAJ_T0020201.1 MGP_CBAJ_G0015888.1 mouse_genomes_project 1 80304344 80386227 + MGP_CBAJ_P0020201 Pnkd protein_coding protein_coding MGP_CBAJ_T0020202.1 MGP_CBAJ_G0015888.1 mouse_genomes_project 1 80305066 80306605 + Pnkd protein_coding retained_intron MGP_CBAJ_T0020210.1 MGP_CBAJ_G0015888.1 mouse_genomes_project 1 80362310 80386219 + MGP_CBAJ_P0020210 Pnkd protein_coding protein_coding MGP_CBAJ_T0020211.1 MGP_CBAJ_G0015888.1 mouse_genomes_project 1 80362363 80365961 + Pnkd protein_coding retained_intron MGP_CBAJ_T0011875.1 MGP_CBAJ_G0009987.1 mouse_genomes_project 1 48330635 48331709 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016736.1 MGP_CBAJ_G0014835.1 mouse_genomes_project 1 46481189 46482828 + Gm28893 processed_transcript processed_transcript MGP_CBAJ_T0000520.1 MGP_CBAJ_G0000462.1 mouse_genomes_project 1 94428668 94431302 + TEC TEC MGP_CBAJ_T0020137.1 MGP_CBAJ_G0015872.1 mouse_genomes_project 1 78063750 78088146 + MGP_CBAJ_P0020137 Tmem169 protein_coding protein_coding MGP_CBAJ_T0020138.1 MGP_CBAJ_G0015872.1 mouse_genomes_project 1 78063776 78085815 + MGP_CBAJ_P0020138 Tmem169 protein_coding protein_coding MGP_CBAJ_T0002917.1 MGP_CBAJ_G0002739.1 mouse_genomes_project 1 211000058 211001022 + Gm28172 antisense antisense MGP_CBAJ_T0002828.1 MGP_CBAJ_G0002665.1 mouse_genomes_project 1 148829025 148833228 + Gm10535 antisense antisense MGP_CBAJ_T0019818.1 MGP_CBAJ_G0015813.1 mouse_genomes_project 1 64217179 64294690 + MGP_CBAJ_P0019818 Fam117b protein_coding protein_coding MGP_CBAJ_T0019819.1 MGP_CBAJ_G0015813.1 mouse_genomes_project 1 64279527 64290859 + MGP_CBAJ_P0019819 Fam117b protein_coding nonsense_mediated_decay MGP_CBAJ_T0019820.1 MGP_CBAJ_G0015813.1 mouse_genomes_project 1 64288524 64290282 + Fam117b protein_coding retained_intron MGP_CBAJ_T0011804.1 MGP_CBAJ_G0009916.1 mouse_genomes_project 1 25600079 25600635 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000414.1 MGP_CBAJ_G0000356.1 mouse_genomes_project 1 38511637 38511983 - TEC TEC MGP_CBAJ_T0009445.1 MGP_CBAJ_G0007583.1 mouse_genomes_project 1 211310533 211310621 - miRNA miRNA MGP_CBAJ_T0019878.1 MGP_CBAJ_G0015821.1 mouse_genomes_project 1 65147626 65193390 + Cd28 protein_coding processed_transcript MGP_CBAJ_T0019879.1 MGP_CBAJ_G0015821.1 mouse_genomes_project 1 65176604 65203584 + MGP_CBAJ_P0019879 Cd28 protein_coding protein_coding MGP_CBAJ_T0019880.1 MGP_CBAJ_G0015821.1 mouse_genomes_project 1 65176648 65194853 + Cd28 protein_coding retained_intron MGP_CBAJ_T0098230.1 MGP_CBAJ_G0036503.1 mouse_genomes_project 1 74522241 74537074 - Gm16076 sense_intronic sense_intronic MGP_CBAJ_T0000504.1 MGP_CBAJ_G0000446.1 mouse_genomes_project 1 90060109 90061191 - TEC TEC MGP_CBAJ_T0002884.1 MGP_CBAJ_G0002710.1 mouse_genomes_project 1 190185679 190194838 - Gm37065 antisense antisense MGP_CBAJ_T0011889.1 MGP_CBAJ_G0010001.1 mouse_genomes_project 1 52948521 52949510 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021511.1 MGP_CBAJ_G0016159.1 mouse_genomes_project 1 138344174 138389831 - MGP_CBAJ_P0021511 Lypd1 protein_coding protein_coding MGP_CBAJ_T0021512.1 MGP_CBAJ_G0016159.1 mouse_genomes_project 1 138348833 138389004 - MGP_CBAJ_P0021512 Lypd1 protein_coding protein_coding MGP_CBAJ_T0021513.1 MGP_CBAJ_G0016159.1 mouse_genomes_project 1 138348867 138390546 - MGP_CBAJ_P0021513 Lypd1 protein_coding protein_coding MGP_CBAJ_T0021514.1 MGP_CBAJ_G0016159.1 mouse_genomes_project 1 138349650 138388533 - MGP_CBAJ_P0021514 Lypd1 protein_coding protein_coding MGP_CBAJ_T0021515.1 MGP_CBAJ_G0016159.1 mouse_genomes_project 1 138350067 138390719 - MGP_CBAJ_P0021515 Lypd1 protein_coding protein_coding MGP_CBAJ_T0005708.1 MGP_CBAJ_G0004781.1 mouse_genomes_project 1 82217799 82219884 - Gm29065 lincRNA lincRNA MGP_CBAJ_T0101474.1 MGP_CBAJ_G0039506.1 mouse_genomes_project 1 112126173 112214124 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0000556.1 MGP_CBAJ_G0000498.1 mouse_genomes_project 1 131620575 131628738 - TEC TEC MGP_CBAJ_T0005689.1 MGP_CBAJ_G0004769.1 mouse_genomes_project 1 77630743 77656754 - Gm28818 lincRNA lincRNA MGP_CBAJ_T0005690.1 MGP_CBAJ_G0004769.1 mouse_genomes_project 1 77633417 77635604 - Gm28818 lincRNA lincRNA MGP_CBAJ_T0023389.1 MGP_CBAJ_G0016570.1 mouse_genomes_project 1 193782217 193882364 - MGP_CBAJ_P0023389 Grem2 protein_coding protein_coding MGP_CBAJ_T0009370.1 MGP_CBAJ_G0007508.1 mouse_genomes_project 1 51853158 51853621 + Gm22693 miRNA miRNA MGP_CBAJ_T0011877.1 MGP_CBAJ_G0009989.1 mouse_genomes_project 1 50076762 50078093 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005822.1 MGP_CBAJ_G0004877.1 mouse_genomes_project 1 149405264 149494795 - Gm38399 lincRNA lincRNA MGP_CBAJ_T0098236.1 MGP_CBAJ_G0036508.1 mouse_genomes_project 1 97589815 97597653 + Gm28499 sense_intronic sense_intronic MGP_CBAJ_T0020190.1 MGP_CBAJ_G0015886.1 mouse_genomes_project 1 80295044 80296119 + MGP_CBAJ_P0020190 Gpbar1 protein_coding protein_coding MGP_CBAJ_T0011740.1 MGP_CBAJ_G0009852.1 mouse_genomes_project 1 4838920 4839930 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005966.1 MGP_CBAJ_G0004988.1 mouse_genomes_project 1 212152749 212154131 + D730003I15Rik lincRNA lincRNA MGP_CBAJ_T0005967.1 MGP_CBAJ_G0004988.1 mouse_genomes_project 1 212152769 212154436 + D730003I15Rik lincRNA lincRNA MGP_CBAJ_T0000757.1 MGP_CBAJ_G0000695.1 mouse_genomes_project 1 210714133 210716754 - TEC TEC MGP_CBAJ_T0020233.1 MGP_CBAJ_G0015894.1 mouse_genomes_project 1 80484456 80564601 - MGP_CBAJ_P0020233 Usp37 protein_coding protein_coding MGP_CBAJ_T0020234.1 MGP_CBAJ_G0015894.1 mouse_genomes_project 1 80488641 80607685 - MGP_CBAJ_P0020234 Usp37 protein_coding protein_coding MGP_CBAJ_T0020235.1 MGP_CBAJ_G0015894.1 mouse_genomes_project 1 80490039 80525042 - Usp37 protein_coding processed_transcript MGP_CBAJ_T0020236.1 MGP_CBAJ_G0015894.1 mouse_genomes_project 1 80500603 80564583 - Usp37 protein_coding retained_intron MGP_CBAJ_T0020237.1 MGP_CBAJ_G0015894.1 mouse_genomes_project 1 80554484 80564604 - MGP_CBAJ_P0020237 Usp37 protein_coding protein_coding MGP_CBAJ_T0020238.1 MGP_CBAJ_G0015894.1 mouse_genomes_project 1 80558637 80564589 - Usp37 protein_coding retained_intron MGP_CBAJ_T0020239.1 MGP_CBAJ_G0015894.1 mouse_genomes_project 1 80558721 80565081 - Usp37 protein_coding processed_transcript MGP_CBAJ_T0002829.1 MGP_CBAJ_G0002666.1 mouse_genomes_project 1 148882450 148883206 + Gm15445 antisense antisense MGP_CBAJ_T0020103.1 MGP_CBAJ_G0015866.1 mouse_genomes_project 1 76683389 76752310 - MGP_CBAJ_P0020103 Bard1 protein_coding protein_coding MGP_CBAJ_T0019424.1 MGP_CBAJ_G0015745.1 mouse_genomes_project 1 54538952 54551477 - MGP_CBAJ_P0019424 Nabp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019425.1 MGP_CBAJ_G0015745.1 mouse_genomes_project 1 54539097 54551144 - MGP_CBAJ_P0019425 Nabp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019426.1 MGP_CBAJ_G0015745.1 mouse_genomes_project 1 54540532 54550992 - MGP_CBAJ_P0019426 Nabp1 protein_coding protein_coding MGP_CBAJ_T0019427.1 MGP_CBAJ_G0015745.1 mouse_genomes_project 1 54542948 54551477 - MGP_CBAJ_P0019427 Nabp1 protein_coding protein_coding MGP_CBAJ_T0019428.1 MGP_CBAJ_G0015745.1 mouse_genomes_project 1 54544430 54546489 - Nabp1 protein_coding retained_intron MGP_CBAJ_T0019429.1 MGP_CBAJ_G0015745.1 mouse_genomes_project 1 54548668 54551477 - Nabp1 protein_coding retained_intron MGP_CBAJ_T0005750.1 MGP_CBAJ_G0004817.1 mouse_genomes_project 1 99593938 99595089 - 1700020N18Rik lincRNA lincRNA MGP_CBAJ_T0021827.1 MGP_CBAJ_G0016227.1 mouse_genomes_project 1 146811364 146859389 + MGP_CBAJ_P0021827 Etnk2 protein_coding protein_coding MGP_CBAJ_T0021828.1 MGP_CBAJ_G0016227.1 mouse_genomes_project 1 146811368 146854179 + Etnk2 protein_coding retained_intron MGP_CBAJ_T0021829.1 MGP_CBAJ_G0016227.1 mouse_genomes_project 1 146811640 146858452 + MGP_CBAJ_P0021829 Etnk2 protein_coding protein_coding MGP_CBAJ_T0021830.1 MGP_CBAJ_G0016227.1 mouse_genomes_project 1 146813544 146848256 + Etnk2 protein_coding retained_intron MGP_CBAJ_T0021833.1 MGP_CBAJ_G0016227.1 mouse_genomes_project 1 146846414 146856036 + Etnk2 protein_coding processed_transcript MGP_CBAJ_T0101462.1 MGP_CBAJ_G0039494.1 mouse_genomes_project 1 95913582 95913832 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0011767.1 MGP_CBAJ_G0009879.1 mouse_genomes_project 1 11546129 11546770 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011817.1 MGP_CBAJ_G0009929.1 mouse_genomes_project 1 31575270 31575495 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005916.1 MGP_CBAJ_G0004952.1 mouse_genomes_project 1 200426064 200431262 - Gm38293 lincRNA lincRNA MGP_CBAJ_T0020740.1 MGP_CBAJ_G0015986.1 mouse_genomes_project 1 93539806 93635970 + Armc9 protein_coding retained_intron MGP_CBAJ_T0020741.1 MGP_CBAJ_G0015986.1 mouse_genomes_project 1 93539810 93600516 + Armc9 protein_coding retained_intron MGP_CBAJ_T0020742.1 MGP_CBAJ_G0015986.1 mouse_genomes_project 1 93539810 93649471 + Armc9 protein_coding retained_intron MGP_CBAJ_T0020743.1 MGP_CBAJ_G0015986.1 mouse_genomes_project 1 93539812 93555312 + Armc9 protein_coding retained_intron MGP_CBAJ_T0020744.1 MGP_CBAJ_G0015986.1 mouse_genomes_project 1 93539824 93564822 + Armc9 protein_coding processed_transcript MGP_CBAJ_T0020745.1 MGP_CBAJ_G0015986.1 mouse_genomes_project 1 93539824 93668823 + MGP_CBAJ_P0020745 Armc9 protein_coding protein_coding MGP_CBAJ_T0020746.1 MGP_CBAJ_G0015986.1 mouse_genomes_project 1 93539825 93549818 + MGP_CBAJ_P0020746 Armc9 protein_coding protein_coding MGP_CBAJ_T0020747.1 MGP_CBAJ_G0015986.1 mouse_genomes_project 1 93539836 93670382 + MGP_CBAJ_P0020747 Armc9 protein_coding protein_coding MGP_CBAJ_T0020748.1 MGP_CBAJ_G0015986.1 mouse_genomes_project 1 93539841 93642133 + MGP_CBAJ_P0020748 Armc9 protein_coding protein_coding MGP_CBAJ_T0020749.1 MGP_CBAJ_G0015986.1 mouse_genomes_project 1 93539845 93562673 + Armc9 protein_coding retained_intron MGP_CBAJ_T0020750.1 MGP_CBAJ_G0015986.1 mouse_genomes_project 1 93583247 93642036 + MGP_CBAJ_P0020750 Armc9 protein_coding protein_coding MGP_CBAJ_T0020751.1 MGP_CBAJ_G0015986.1 mouse_genomes_project 1 93589353 93642133 + MGP_CBAJ_P0020751 Armc9 protein_coding protein_coding MGP_CBAJ_T0020752.1 MGP_CBAJ_G0015986.1 mouse_genomes_project 1 93634209 93661284 + MGP_CBAJ_P0020752 Armc9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023716.1 MGP_CBAJ_G0016637.1 mouse_genomes_project 1 203346445 203354141 + protein_coding retained_intron MGP_CBAJ_T0023717.1 MGP_CBAJ_G0016637.1 mouse_genomes_project 1 203351385 203359557 + protein_coding processed_transcript MGP_CBAJ_T0023718.1 MGP_CBAJ_G0016637.1 mouse_genomes_project 1 203352877 203379146 + MGP_CBAJ_P0023718 protein_coding unknown_likely_coding MGP_CBAJ_T0023719.1 MGP_CBAJ_G0016637.1 mouse_genomes_project 1 203353189 203373646 + MGP_CBAJ_P0023719 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023720.1 MGP_CBAJ_G0016637.1 mouse_genomes_project 1 203359474 203377007 + protein_coding retained_intron MGP_CBAJ_T0023721.1 MGP_CBAJ_G0016637.1 mouse_genomes_project 1 203361252 203373940 + protein_coding retained_intron MGP_CBAJ_T0005731.1 MGP_CBAJ_G0004799.1 mouse_genomes_project 1 94638357 94639120 + lincRNA lincRNA MGP_CBAJ_T0011968.1 MGP_CBAJ_G0010080.1 mouse_genomes_project 1 79245640 79245974 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099756.1 MGP_CBAJ_G0038011.1 mouse_genomes_project 1 56292150 56292251 + Gm24349 snoRNA snoRNA MGP_CBAJ_T0023943.1 MGP_CBAJ_G0016686.1 mouse_genomes_project 1 213039236 213040648 - Traf5 protein_coding retained_intron MGP_CBAJ_T0023944.1 MGP_CBAJ_G0016686.1 mouse_genomes_project 1 213039236 213041969 - MGP_CBAJ_P0023944 Traf5 protein_coding protein_coding MGP_CBAJ_T0023945.1 MGP_CBAJ_G0016686.1 mouse_genomes_project 1 213039461 213068485 - MGP_CBAJ_P0023945 Traf5 protein_coding unknown_likely_coding MGP_CBAJ_T0023946.1 MGP_CBAJ_G0016686.1 mouse_genomes_project 1 213039461 213091893 - MGP_CBAJ_P0023946 Traf5 protein_coding protein_coding MGP_CBAJ_T0023947.1 MGP_CBAJ_G0016686.1 mouse_genomes_project 1 213048720 213053534 - MGP_CBAJ_P0023947 Traf5 protein_coding protein_coding MGP_CBAJ_T0023948.1 MGP_CBAJ_G0016686.1 mouse_genomes_project 1 213049748 213053534 - Traf5 protein_coding retained_intron MGP_CBAJ_T0011948.1 MGP_CBAJ_G0010060.1 mouse_genomes_project 1 70375447 70375769 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000558.1 MGP_CBAJ_G0000500.1 mouse_genomes_project 1 133297972 133298648 - TEC TEC MGP_CBAJ_T0021080.1 MGP_CBAJ_G0016063.1 mouse_genomes_project 1 100971001 100972057 + MGP_CBAJ_P0021080 Olfr12 protein_coding protein_coding MGP_CBAJ_T0011836.1 MGP_CBAJ_G0009948.1 mouse_genomes_project 1 35497299 35497722 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0019120.1 MGP_CBAJ_G0015680.1 mouse_genomes_project 1 38640142 38653097 - MGP_CBAJ_P0019120 Coa5 protein_coding protein_coding MGP_CBAJ_T0019121.1 MGP_CBAJ_G0015680.1 mouse_genomes_project 1 38651505 38652994 - Coa5 protein_coding retained_intron MGP_CBAJ_T0000428.1 MGP_CBAJ_G0000370.1 mouse_genomes_project 1 45592786 45594069 + TEC TEC MGP_CBAJ_T0021528.1 MGP_CBAJ_G0016161.1 mouse_genomes_project 1 139850777 140064010 + Mgat5 protein_coding retained_intron MGP_CBAJ_T0021529.1 MGP_CBAJ_G0016161.1 mouse_genomes_project 1 139850780 140179745 + MGP_CBAJ_P0021529 Mgat5 protein_coding protein_coding MGP_CBAJ_T0021530.1 MGP_CBAJ_G0016161.1 mouse_genomes_project 1 139850790 140074589 + Mgat5 protein_coding retained_intron MGP_CBAJ_T0021531.1 MGP_CBAJ_G0016161.1 mouse_genomes_project 1 139976387 140175350 + MGP_CBAJ_P0021531 Mgat5 protein_coding protein_coding MGP_CBAJ_T0011739.1 MGP_CBAJ_G0009851.1 mouse_genomes_project 1 4700175 4700353 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098246.1 MGP_CBAJ_G0036518.1 mouse_genomes_project 1 168848011 168849642 - Gm28791 sense_intronic sense_intronic MGP_CBAJ_T0022308.1 MGP_CBAJ_G0016325.1 mouse_genomes_project 1 167615796 167684152 + MGP_CBAJ_P0022308 Edem3 protein_coding protein_coding MGP_CBAJ_T0022309.1 MGP_CBAJ_G0016325.1 mouse_genomes_project 1 167615799 167687268 + MGP_CBAJ_P0022309 Edem3 protein_coding protein_coding MGP_CBAJ_T0022310.1 MGP_CBAJ_G0016325.1 mouse_genomes_project 1 167615885 167684196 + MGP_CBAJ_P0022310 Edem3 protein_coding protein_coding MGP_CBAJ_T0022311.1 MGP_CBAJ_G0016325.1 mouse_genomes_project 1 167615885 167684196 + MGP_CBAJ_P0022311 Edem3 protein_coding protein_coding MGP_CBAJ_T0018450.1 MGP_CBAJ_G0015555.1 mouse_genomes_project 1 1708852 1714336 - MGP_CBAJ_P0018450 Sox17 protein_coding protein_coding MGP_CBAJ_T0018451.1 MGP_CBAJ_G0015555.1 mouse_genomes_project 1 1709171 1714680 - MGP_CBAJ_P0018451 Sox17 protein_coding protein_coding MGP_CBAJ_T0018452.1 MGP_CBAJ_G0015555.1 mouse_genomes_project 1 1709311 1715277 - MGP_CBAJ_P0018452 Sox17 protein_coding protein_coding MGP_CBAJ_T0018453.1 MGP_CBAJ_G0015555.1 mouse_genomes_project 1 1709634 1714286 - MGP_CBAJ_P0018453 Sox17 protein_coding protein_coding MGP_CBAJ_T0018454.1 MGP_CBAJ_G0015555.1 mouse_genomes_project 1 1710378 1711526 - Sox17 protein_coding retained_intron MGP_CBAJ_T0018455.1 MGP_CBAJ_G0015555.1 mouse_genomes_project 1 1710379 1714253 - MGP_CBAJ_P0018455 Sox17 protein_coding protein_coding MGP_CBAJ_T0018456.1 MGP_CBAJ_G0015555.1 mouse_genomes_project 1 1710386 1711657 - MGP_CBAJ_P0018456 Sox17 protein_coding protein_coding MGP_CBAJ_T0018457.1 MGP_CBAJ_G0015555.1 mouse_genomes_project 1 1710388 1714319 - MGP_CBAJ_P0018457 Sox17 protein_coding protein_coding MGP_CBAJ_T0000445.1 MGP_CBAJ_G0000387.1 mouse_genomes_project 1 62915408 62919248 + TEC TEC MGP_CBAJ_T0000349.1 MGP_CBAJ_G0000294.1 mouse_genomes_project 1 11416816 11417512 - TEC TEC MGP_CBAJ_T0016731.1 MGP_CBAJ_G0014832.1 mouse_genomes_project 1 41043454 41048470 - Gm15832 processed_transcript processed_transcript MGP_CBAJ_T0023417.1 MGP_CBAJ_G0016577.1 mouse_genomes_project 1 194824234 194858478 + MGP_CBAJ_P0023417 Exo1 protein_coding protein_coding MGP_CBAJ_T0023418.1 MGP_CBAJ_G0016577.1 mouse_genomes_project 1 194824447 194831266 + MGP_CBAJ_P0023418 Exo1 protein_coding protein_coding MGP_CBAJ_T0023419.1 MGP_CBAJ_G0016577.1 mouse_genomes_project 1 194824449 194837147 + MGP_CBAJ_P0023419 Exo1 protein_coding protein_coding MGP_CBAJ_T0023420.1 MGP_CBAJ_G0016577.1 mouse_genomes_project 1 194824466 194837169 + MGP_CBAJ_P0023420 Exo1 protein_coding protein_coding MGP_CBAJ_T0023421.1 MGP_CBAJ_G0016577.1 mouse_genomes_project 1 194824832 194837165 + MGP_CBAJ_P0023421 Exo1 protein_coding protein_coding MGP_CBAJ_T0023422.1 MGP_CBAJ_G0016577.1 mouse_genomes_project 1 194837967 194846002 + MGP_CBAJ_P0023422 Exo1 protein_coding protein_coding MGP_CBAJ_T0023423.1 MGP_CBAJ_G0016577.1 mouse_genomes_project 1 194846452 194853721 + MGP_CBAJ_P0023423 Exo1 protein_coding protein_coding MGP_CBAJ_T0023424.1 MGP_CBAJ_G0016577.1 mouse_genomes_project 1 194849286 194853538 + Exo1 protein_coding retained_intron MGP_CBAJ_T0023425.1 MGP_CBAJ_G0016577.1 mouse_genomes_project 1 194849424 194851191 + MGP_CBAJ_P0023425 Exo1 protein_coding protein_coding MGP_CBAJ_T0023426.1 MGP_CBAJ_G0016577.1 mouse_genomes_project 1 194852563 194853733 + Exo1 protein_coding processed_transcript MGP_CBAJ_T0101478.1 MGP_CBAJ_G0039510.1 mouse_genomes_project 1 115231650 115231864 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0000491.1 MGP_CBAJ_G0000433.1 mouse_genomes_project 1 86215540 86217047 - TEC TEC MGP_CBAJ_T0023117.1 MGP_CBAJ_G0016490.1 mouse_genomes_project 1 189456346 189462878 + MGP_CBAJ_P0023117 B4galt3 protein_coding protein_coding MGP_CBAJ_T0023118.1 MGP_CBAJ_G0016490.1 mouse_genomes_project 1 189456357 189460297 + MGP_CBAJ_P0023118 B4galt3 protein_coding protein_coding MGP_CBAJ_T0023119.1 MGP_CBAJ_G0016490.1 mouse_genomes_project 1 189456361 189462879 + MGP_CBAJ_P0023119 B4galt3 protein_coding protein_coding MGP_CBAJ_T0023120.1 MGP_CBAJ_G0016490.1 mouse_genomes_project 1 189456361 189457948 + MGP_CBAJ_P0023120 B4galt3 protein_coding protein_coding MGP_CBAJ_T0023121.1 MGP_CBAJ_G0016490.1 mouse_genomes_project 1 189456372 189458049 + B4galt3 protein_coding retained_intron MGP_CBAJ_T0023122.1 MGP_CBAJ_G0016490.1 mouse_genomes_project 1 189456383 189462878 + MGP_CBAJ_P0023122 B4galt3 protein_coding protein_coding MGP_CBAJ_T0023123.1 MGP_CBAJ_G0016490.1 mouse_genomes_project 1 189456392 189462879 + B4galt3 protein_coding retained_intron MGP_CBAJ_T0023124.1 MGP_CBAJ_G0016490.1 mouse_genomes_project 1 189456426 189457378 + B4galt3 protein_coding processed_transcript MGP_CBAJ_T0023125.1 MGP_CBAJ_G0016490.1 mouse_genomes_project 1 189456836 189457651 + B4galt3 protein_coding retained_intron MGP_CBAJ_T0023126.1 MGP_CBAJ_G0016490.1 mouse_genomes_project 1 189457648 189458613 + MGP_CBAJ_P0023126 B4galt3 protein_coding protein_coding MGP_CBAJ_T0023127.1 MGP_CBAJ_G0016490.1 mouse_genomes_project 1 189459524 189462877 + B4galt3 protein_coding retained_intron MGP_CBAJ_T0005716.1 MGP_CBAJ_G0004788.1 mouse_genomes_project 1 85116160 85120823 + Gm29611 lincRNA lincRNA MGP_CBAJ_T0000356.1 MGP_CBAJ_G0000301.1 mouse_genomes_project 1 12464528 12464967 - TEC TEC MGP_CBAJ_T0019496.1 MGP_CBAJ_G0015753.1 mouse_genomes_project 1 55950363 55989160 - MGP_CBAJ_P0019496 Inpp1 protein_coding protein_coding MGP_CBAJ_T0019497.1 MGP_CBAJ_G0015753.1 mouse_genomes_project 1 55958435 55968244 - MGP_CBAJ_P0019497 Inpp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019498.1 MGP_CBAJ_G0015753.1 mouse_genomes_project 1 55958823 55963804 - Inpp1 protein_coding retained_intron MGP_CBAJ_T0019499.1 MGP_CBAJ_G0015753.1 mouse_genomes_project 1 55963420 55989040 - MGP_CBAJ_P0019499 Inpp1 protein_coding protein_coding MGP_CBAJ_T0019500.1 MGP_CBAJ_G0015753.1 mouse_genomes_project 1 55965734 55988923 - Inpp1 protein_coding retained_intron MGP_CBAJ_T0019501.1 MGP_CBAJ_G0015753.1 mouse_genomes_project 1 55965821 55969127 - MGP_CBAJ_P0019501 Inpp1 protein_coding protein_coding MGP_CBAJ_T0022820.1 MGP_CBAJ_G0016420.1 mouse_genomes_project 1 181465547 181511078 + MGP_CBAJ_P0022820 Selp protein_coding protein_coding MGP_CBAJ_T0022821.1 MGP_CBAJ_G0016420.1 mouse_genomes_project 1 181500699 181502174 + Selp protein_coding retained_intron MGP_CBAJ_T0022822.1 MGP_CBAJ_G0016420.1 mouse_genomes_project 1 181501258 181510193 + MGP_CBAJ_P0022822 Selp protein_coding nonsense_mediated_decay MGP_CBAJ_T0022823.1 MGP_CBAJ_G0016420.1 mouse_genomes_project 1 181504083 181511063 + Selp protein_coding retained_intron MGP_CBAJ_T0022824.1 MGP_CBAJ_G0016420.1 mouse_genomes_project 1 181506918 181510206 + Selp protein_coding retained_intron MGP_CBAJ_T0000403.1 MGP_CBAJ_G0000345.1 mouse_genomes_project 1 34502613 34502954 + TEC TEC MGP_CBAJ_T0019155.1 MGP_CBAJ_G0015687.1 mouse_genomes_project 1 39180918 39189171 + MGP_CBAJ_P0019155 Mrpl30 protein_coding protein_coding MGP_CBAJ_T0019156.1 MGP_CBAJ_G0015687.1 mouse_genomes_project 1 39180973 39189000 + MGP_CBAJ_P0019156 Mrpl30 protein_coding protein_coding MGP_CBAJ_T0019157.1 MGP_CBAJ_G0015687.1 mouse_genomes_project 1 39180974 39183689 + Mrpl30 protein_coding retained_intron MGP_CBAJ_T0019158.1 MGP_CBAJ_G0015687.1 mouse_genomes_project 1 39180984 39184427 + MGP_CBAJ_P0019158 Mrpl30 protein_coding protein_coding MGP_CBAJ_T0019159.1 MGP_CBAJ_G0015687.1 mouse_genomes_project 1 39183375 39188801 + MGP_CBAJ_P0019159 Mrpl30 protein_coding protein_coding MGP_CBAJ_T0019160.1 MGP_CBAJ_G0015687.1 mouse_genomes_project 1 39184377 39188974 + MGP_CBAJ_P0019160 Mrpl30 protein_coding protein_coding MGP_CBAJ_T0019161.1 MGP_CBAJ_G0015687.1 mouse_genomes_project 1 39187891 39188761 + Mrpl30 protein_coding retained_intron MGP_CBAJ_T0011839.1 MGP_CBAJ_G0009951.1 mouse_genomes_project 1 35523991 35524634 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0022175.1 MGP_CBAJ_G0016302.1 mouse_genomes_project 1 158362971 158492463 - MGP_CBAJ_P0022175 Cdc73 protein_coding protein_coding MGP_CBAJ_T0022176.1 MGP_CBAJ_G0016302.1 mouse_genomes_project 1 158370326 158411043 - Cdc73 protein_coding processed_transcript MGP_CBAJ_T0022177.1 MGP_CBAJ_G0016302.1 mouse_genomes_project 1 158400374 158403101 - Cdc73 protein_coding retained_intron MGP_CBAJ_T0022178.1 MGP_CBAJ_G0016302.1 mouse_genomes_project 1 158409929 158412987 - Cdc73 protein_coding retained_intron MGP_CBAJ_T0022180.1 MGP_CBAJ_G0016302.1 mouse_genomes_project 1 158478871 158491771 - MGP_CBAJ_P0022180 Cdc73 protein_coding nonsense_mediated_decay MGP_CBAJ_T0011978.1 MGP_CBAJ_G0010090.1 mouse_genomes_project 1 86715430 86715694 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0023878.1 MGP_CBAJ_G0016670.1 mouse_genomes_project 1 211888790 211899748 - Mfsd7b protein_coding retained_intron MGP_CBAJ_T0023879.1 MGP_CBAJ_G0016670.1 mouse_genomes_project 1 211888790 211919119 - MGP_CBAJ_P0023879 Mfsd7b protein_coding protein_coding MGP_CBAJ_T0023880.1 MGP_CBAJ_G0016670.1 mouse_genomes_project 1 211888792 211918928 - MGP_CBAJ_P0023880 Mfsd7b protein_coding nonsense_mediated_decay MGP_CBAJ_T0023881.1 MGP_CBAJ_G0016670.1 mouse_genomes_project 1 211888793 211891398 - Mfsd7b protein_coding retained_intron MGP_CBAJ_T0023882.1 MGP_CBAJ_G0016670.1 mouse_genomes_project 1 211900816 211903084 - Mfsd7b protein_coding retained_intron MGP_CBAJ_T0023883.1 MGP_CBAJ_G0016670.1 mouse_genomes_project 1 211917869 211919085 - MGP_CBAJ_P0023883 Mfsd7b protein_coding protein_coding MGP_CBAJ_T0011908.1 MGP_CBAJ_G0010020.1 mouse_genomes_project 1 58977806 58978202 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098586.1 MGP_CBAJ_G0036841.1 mouse_genomes_project 1 189986017 189986072 - Gm26412 snRNA snRNA MGP_CBAJ_T0005691.1 MGP_CBAJ_G0004770.1 mouse_genomes_project 1 77713155 77764066 - 4933417E11Rik lincRNA lincRNA MGP_CBAJ_T0000729.1 MGP_CBAJ_G0000668.1 mouse_genomes_project 1 199968906 199976453 + TEC TEC MGP_CBAJ_T0011975.1 MGP_CBAJ_G0010087.1 mouse_genomes_project 1 83912258 83912550 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0019430.1 MGP_CBAJ_G0015746.1 mouse_genomes_project 1 54840093 55011717 - MGP_CBAJ_P0019430 Myo1b protein_coding protein_coding MGP_CBAJ_T0019431.1 MGP_CBAJ_G0015746.1 mouse_genomes_project 1 54840309 55011587 - MGP_CBAJ_P0019431 Myo1b protein_coding protein_coding MGP_CBAJ_T0019432.1 MGP_CBAJ_G0015746.1 mouse_genomes_project 1 54840316 55002958 - MGP_CBAJ_P0019432 Myo1b protein_coding protein_coding MGP_CBAJ_T0019433.1 MGP_CBAJ_G0015746.1 mouse_genomes_project 1 54840321 55011574 - MGP_CBAJ_P0019433 Myo1b protein_coding protein_coding MGP_CBAJ_T0019434.1 MGP_CBAJ_G0015746.1 mouse_genomes_project 1 54851055 54855182 - Myo1b protein_coding retained_intron MGP_CBAJ_T0019435.1 MGP_CBAJ_G0015746.1 mouse_genomes_project 1 54853233 54861603 - Myo1b protein_coding processed_transcript MGP_CBAJ_T0019436.1 MGP_CBAJ_G0015746.1 mouse_genomes_project 1 54853301 54858104 - Myo1b protein_coding retained_intron MGP_CBAJ_T0019437.1 MGP_CBAJ_G0015746.1 mouse_genomes_project 1 54857587 54867073 - Myo1b protein_coding processed_transcript MGP_CBAJ_T0019438.1 MGP_CBAJ_G0015746.1 mouse_genomes_project 1 54867029 54885883 - Myo1b protein_coding processed_transcript MGP_CBAJ_T0019439.1 MGP_CBAJ_G0015746.1 mouse_genomes_project 1 54870355 54872862 - Myo1b protein_coding retained_intron MGP_CBAJ_T0019440.1 MGP_CBAJ_G0015746.1 mouse_genomes_project 1 54888135 54989171 - MGP_CBAJ_P0019440 Myo1b protein_coding protein_coding MGP_CBAJ_T0019441.1 MGP_CBAJ_G0015746.1 mouse_genomes_project 1 54889812 54912630 - Myo1b protein_coding processed_transcript MGP_CBAJ_T0019442.1 MGP_CBAJ_G0015746.1 mouse_genomes_project 1 54902765 55011558 - Myo1b protein_coding retained_intron MGP_CBAJ_T0019443.1 MGP_CBAJ_G0015746.1 mouse_genomes_project 1 54955612 55011567 - Myo1b protein_coding retained_intron MGP_CBAJ_T0012165.1 MGP_CBAJ_G0010277.1 mouse_genomes_project 1 176166511 176167017 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000397.1 MGP_CBAJ_G0000340.1 mouse_genomes_project 1 33308425 33310895 + TEC TEC MGP_CBAJ_T0000667.1 MGP_CBAJ_G0000607.1 mouse_genomes_project 1 174555364 174787681 + TEC TEC MGP_CBAJ_T0012124.1 MGP_CBAJ_G0010236.1 mouse_genomes_project 1 157842589 157843859 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002868.1 MGP_CBAJ_G0002697.1 mouse_genomes_project 1 180551948 180558649 + Gm20471 antisense antisense MGP_CBAJ_T0098507.1 MGP_CBAJ_G0036762.1 mouse_genomes_project 1 913337 913395 - Gm27396 snRNA snRNA MGP_CBAJ_T0000679.1 MGP_CBAJ_G0000619.1 mouse_genomes_project 1 177517696 177521191 - TEC TEC MGP_CBAJ_T0000635.1 MGP_CBAJ_G0000575.1 mouse_genomes_project 1 160278339 160281593 - TEC TEC MGP_CBAJ_T0011864.1 MGP_CBAJ_G0009976.1 mouse_genomes_project 1 46953543 46954012 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021877.1 MGP_CBAJ_G0016240.1 mouse_genomes_project 1 147706968 147760079 + MGP_CBAJ_P0021877 Chit1 protein_coding protein_coding MGP_CBAJ_T0021878.1 MGP_CBAJ_G0016240.1 mouse_genomes_project 1 147706968 147760079 + MGP_CBAJ_P0021878 Chit1 protein_coding protein_coding MGP_CBAJ_T0021879.1 MGP_CBAJ_G0016240.1 mouse_genomes_project 1 147747443 147760078 + MGP_CBAJ_P0021879 Chit1 protein_coding protein_coding MGP_CBAJ_T0018676.1 MGP_CBAJ_G0015589.1 mouse_genomes_project 1 11821372 11861126 + MGP_CBAJ_P0018676 Xkr9 protein_coding protein_coding MGP_CBAJ_T0005767.1 MGP_CBAJ_G0004832.1 mouse_genomes_project 1 107326974 107343764 + Gm29461 lincRNA lincRNA MGP_CBAJ_T0000637.1 MGP_CBAJ_G0000577.1 mouse_genomes_project 1 162287312 162289212 + TEC TEC MGP_CBAJ_T0011947.1 MGP_CBAJ_G0010059.1 mouse_genomes_project 1 69941419 69942073 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099827.1 MGP_CBAJ_G0038082.1 mouse_genomes_project 1 209264598 209264729 - Gm25095 snoRNA snoRNA MGP_CBAJ_T0005566.1 MGP_CBAJ_G0004678.1 mouse_genomes_project 1 11173228 11184827 + Gm29283 lincRNA lincRNA MGP_CBAJ_T0011876.1 MGP_CBAJ_G0009988.1 mouse_genomes_project 1 49445981 49446277 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012177.1 MGP_CBAJ_G0010289.1 mouse_genomes_project 1 182994559 182996139 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005637.1 MGP_CBAJ_G0004730.1 mouse_genomes_project 1 53907300 53908601 + Gm28322 lincRNA lincRNA MGP_CBAJ_T0005576.1 MGP_CBAJ_G0004688.1 mouse_genomes_project 1 22585286 22585685 + Gm27028 lincRNA lincRNA MGP_CBAJ_T0000453.1 MGP_CBAJ_G0000395.1 mouse_genomes_project 1 65209576 65215932 + TEC TEC MGP_CBAJ_T0011940.1 MGP_CBAJ_G0010052.1 mouse_genomes_project 1 68070610 68071227 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0022153.1 MGP_CBAJ_G0016296.1 mouse_genomes_project 1 153730500 153760093 + MGP_CBAJ_P0022153 F13b protein_coding protein_coding MGP_CBAJ_T0022154.1 MGP_CBAJ_G0016296.1 mouse_genomes_project 1 153752732 153754242 + F13b protein_coding processed_transcript MGP_CBAJ_T0000653.1 MGP_CBAJ_G0000593.1 mouse_genomes_project 1 170022461 170025018 - TEC TEC MGP_CBAJ_T0012085.1 MGP_CBAJ_G0010197.1 mouse_genomes_project 1 134973551 134973928 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009377.1 MGP_CBAJ_G0007515.1 mouse_genomes_project 1 67879085 67879211 + Gm27512 miRNA miRNA MGP_CBAJ_T0009393.1 MGP_CBAJ_G0007531.1 mouse_genomes_project 1 91873732 91873809 + Mir5126 miRNA miRNA MGP_CBAJ_T0101461.1 MGP_CBAJ_G0039493.1 mouse_genomes_project 1 95910847 95911691 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0000534.1 MGP_CBAJ_G0000476.1 mouse_genomes_project 1 100268375 100270881 - TEC TEC MGP_CBAJ_T0005845.1 MGP_CBAJ_G0004895.1 mouse_genomes_project 1 164649483 164671963 + Gm29020 lincRNA lincRNA MGP_CBAJ_T0011928.1 MGP_CBAJ_G0010040.1 mouse_genomes_project 1 65243283 65244110 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000482.1 MGP_CBAJ_G0000424.1 mouse_genomes_project 1 79132938 79135469 - TEC TEC MGP_CBAJ_T0020115.1 MGP_CBAJ_G0015869.1 mouse_genomes_project 1 77277521 77347081 - MGP_CBAJ_P0020115 Fn1 protein_coding protein_coding MGP_CBAJ_T0020116.1 MGP_CBAJ_G0015869.1 mouse_genomes_project 1 77277524 77347081 - MGP_CBAJ_P0020116 Fn1 protein_coding protein_coding MGP_CBAJ_T0020117.1 MGP_CBAJ_G0015869.1 mouse_genomes_project 1 77277524 77347081 - MGP_CBAJ_P0020117 Fn1 protein_coding protein_coding MGP_CBAJ_T0020118.1 MGP_CBAJ_G0015869.1 mouse_genomes_project 1 77277524 77347081 - MGP_CBAJ_P0020118 Fn1 protein_coding protein_coding MGP_CBAJ_T0020119.1 MGP_CBAJ_G0015869.1 mouse_genomes_project 1 77277525 77347081 - MGP_CBAJ_P0020119 Fn1 protein_coding protein_coding MGP_CBAJ_T0020120.1 MGP_CBAJ_G0015869.1 mouse_genomes_project 1 77277525 77347084 - MGP_CBAJ_P0020120 Fn1 protein_coding protein_coding MGP_CBAJ_T0020121.1 MGP_CBAJ_G0015869.1 mouse_genomes_project 1 77277525 77347109 - MGP_CBAJ_P0020121 Fn1 protein_coding protein_coding MGP_CBAJ_T0020122.1 MGP_CBAJ_G0015869.1 mouse_genomes_project 1 77277527 77301492 - Fn1 protein_coding retained_intron MGP_CBAJ_T0020123.1 MGP_CBAJ_G0015869.1 mouse_genomes_project 1 77278862 77283073 - Fn1 protein_coding retained_intron MGP_CBAJ_T0020124.1 MGP_CBAJ_G0015869.1 mouse_genomes_project 1 77282098 77292298 - MGP_CBAJ_P0020124 Fn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020125.1 MGP_CBAJ_G0015869.1 mouse_genomes_project 1 77290289 77294306 - MGP_CBAJ_P0020125 Fn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020126.1 MGP_CBAJ_G0015869.1 mouse_genomes_project 1 77292316 77294774 - Fn1 protein_coding retained_intron MGP_CBAJ_T0020127.1 MGP_CBAJ_G0015869.1 mouse_genomes_project 1 77296026 77316281 - Fn1 protein_coding retained_intron MGP_CBAJ_T0020128.1 MGP_CBAJ_G0015869.1 mouse_genomes_project 1 77321393 77335023 - MGP_CBAJ_P0020128 Fn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020129.1 MGP_CBAJ_G0015869.1 mouse_genomes_project 1 77336559 77347070 - MGP_CBAJ_P0020129 Fn1 protein_coding protein_coding MGP_CBAJ_T0020130.1 MGP_CBAJ_G0015869.1 mouse_genomes_project 1 77338211 77347081 - Fn1 protein_coding retained_intron MGP_CBAJ_T0020131.1 MGP_CBAJ_G0015869.1 mouse_genomes_project 1 77339377 77347081 - MGP_CBAJ_P0020131 Fn1 protein_coding protein_coding MGP_CBAJ_T0021229.1 MGP_CBAJ_G0016093.1 mouse_genomes_project 1 102601594 102615848 - MGP_CBAJ_P0021229 Pdcd1 protein_coding protein_coding MGP_CBAJ_T0021843.1 MGP_CBAJ_G0016232.1 mouse_genomes_project 1 147137601 147179074 - MGP_CBAJ_P0021843 Zc3h11a protein_coding protein_coding MGP_CBAJ_T0021844.1 MGP_CBAJ_G0016232.1 mouse_genomes_project 1 147137602 147179012 - MGP_CBAJ_P0021844 Zc3h11a protein_coding protein_coding MGP_CBAJ_T0021845.1 MGP_CBAJ_G0016232.1 mouse_genomes_project 1 147141619 147145079 - Zc3h11a protein_coding processed_transcript MGP_CBAJ_T0021846.1 MGP_CBAJ_G0016232.1 mouse_genomes_project 1 147144976 147156971 - MGP_CBAJ_P0021846 Zc3h11a protein_coding protein_coding MGP_CBAJ_T0021847.1 MGP_CBAJ_G0016232.1 mouse_genomes_project 1 147156684 147179072 - MGP_CBAJ_P0021847 Zc3h11a protein_coding protein_coding MGP_CBAJ_T0021848.1 MGP_CBAJ_G0016232.1 mouse_genomes_project 1 147156942 147179052 - MGP_CBAJ_P0021848 Zc3h11a protein_coding protein_coding MGP_CBAJ_T0021849.1 MGP_CBAJ_G0016232.1 mouse_genomes_project 1 147158089 147179054 - Zc3h11a protein_coding retained_intron MGP_CBAJ_T0021850.1 MGP_CBAJ_G0016232.1 mouse_genomes_project 1 147158380 147178976 - MGP_CBAJ_P0021850 Zc3h11a protein_coding protein_coding MGP_CBAJ_T0021851.1 MGP_CBAJ_G0016232.1 mouse_genomes_project 1 147163656 147178990 - MGP_CBAJ_P0021851 Zc3h11a protein_coding protein_coding MGP_CBAJ_T0021852.1 MGP_CBAJ_G0016232.1 mouse_genomes_project 1 147165092 147178975 - Zc3h11a protein_coding retained_intron MGP_CBAJ_T0021853.1 MGP_CBAJ_G0016232.1 mouse_genomes_project 1 147165345 147179062 - Zc3h11a protein_coding processed_transcript MGP_CBAJ_T0021854.1 MGP_CBAJ_G0016232.1 mouse_genomes_project 1 147172153 147179053 - Zc3h11a protein_coding processed_transcript MGP_CBAJ_T0021855.1 MGP_CBAJ_G0016232.1 mouse_genomes_project 1 147172497 147179074 - Zc3h11a protein_coding retained_intron MGP_CBAJ_T0009432.1 MGP_CBAJ_G0007570.1 mouse_genomes_project 1 186331615 186331735 + Mir6348 miRNA miRNA MGP_CBAJ_T0000456.1 MGP_CBAJ_G0000398.1 mouse_genomes_project 1 66056493 66056775 + TEC TEC MGP_CBAJ_T0021895.1 MGP_CBAJ_G0016245.1 mouse_genomes_project 1 147934962 147973523 - MGP_CBAJ_P0021895 Ppfia4 protein_coding protein_coding MGP_CBAJ_T0021896.1 MGP_CBAJ_G0016245.1 mouse_genomes_project 1 147934963 147985305 - MGP_CBAJ_P0021896 Ppfia4 protein_coding unknown_likely_coding MGP_CBAJ_T0021897.1 MGP_CBAJ_G0016245.1 mouse_genomes_project 1 147934963 147967867 - MGP_CBAJ_P0021897 Ppfia4 protein_coding protein_coding MGP_CBAJ_T0021898.1 MGP_CBAJ_G0016245.1 mouse_genomes_project 1 147934964 147942953 - Ppfia4 protein_coding processed_transcript MGP_CBAJ_T0021899.1 MGP_CBAJ_G0016245.1 mouse_genomes_project 1 147934968 147942915 - Ppfia4 protein_coding retained_intron MGP_CBAJ_T0021900.1 MGP_CBAJ_G0016245.1 mouse_genomes_project 1 147936560 147952043 - Ppfia4 protein_coding retained_intron MGP_CBAJ_T0016737.1 MGP_CBAJ_G0014836.1 mouse_genomes_project 1 55184608 55271951 + Gm28177 processed_transcript processed_transcript MGP_CBAJ_T0012100.1 MGP_CBAJ_G0010212.1 mouse_genomes_project 1 144453211 144454424 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011954.1 MGP_CBAJ_G0010066.1 mouse_genomes_project 1 71075243 71075655 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012138.1 MGP_CBAJ_G0010250.1 mouse_genomes_project 1 164564294 164566331 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000724.1 MGP_CBAJ_G0000664.1 mouse_genomes_project 1 197636582 197637176 - TEC TEC MGP_CBAJ_T0000725.1 MGP_CBAJ_G0000664.1 mouse_genomes_project 1 197636628 197637174 - TEC pseudogene MGP_CBAJ_T0019122.1 MGP_CBAJ_G0015681.1 mouse_genomes_project 1 38653132 38661276 + MGP_CBAJ_P0019122 Unc50 protein_coding protein_coding MGP_CBAJ_T0019123.1 MGP_CBAJ_G0015681.1 mouse_genomes_project 1 38653163 38661416 + MGP_CBAJ_P0019123 Unc50 protein_coding protein_coding MGP_CBAJ_T0019124.1 MGP_CBAJ_G0015681.1 mouse_genomes_project 1 38653170 38659770 + MGP_CBAJ_P0019124 Unc50 protein_coding protein_coding MGP_CBAJ_T0019125.1 MGP_CBAJ_G0015681.1 mouse_genomes_project 1 38653179 38659562 + MGP_CBAJ_P0019125 Unc50 protein_coding protein_coding MGP_CBAJ_T0019126.1 MGP_CBAJ_G0015681.1 mouse_genomes_project 1 38653195 38661279 + MGP_CBAJ_P0019126 Unc50 protein_coding protein_coding MGP_CBAJ_T0019127.1 MGP_CBAJ_G0015681.1 mouse_genomes_project 1 38653201 38654548 + MGP_CBAJ_P0019127 Unc50 protein_coding protein_coding MGP_CBAJ_T0019128.1 MGP_CBAJ_G0015681.1 mouse_genomes_project 1 38654337 38659904 + Unc50 protein_coding retained_intron MGP_CBAJ_T0012187.1 MGP_CBAJ_G0010299.1 mouse_genomes_project 1 187343820 187344162 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011917.1 MGP_CBAJ_G0010029.1 mouse_genomes_project 1 62902606 62903057 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005907.1 MGP_CBAJ_G0004944.1 mouse_genomes_project 1 194518285 194522402 + Gm36307 lincRNA lincRNA MGP_CBAJ_T0021055.1 MGP_CBAJ_G0016056.1 mouse_genomes_project 1 100175324 100403359 - MGP_CBAJ_P0021055 Hdac4 protein_coding unknown_likely_coding MGP_CBAJ_T0021056.1 MGP_CBAJ_G0016056.1 mouse_genomes_project 1 100175324 100439653 - MGP_CBAJ_P0021056 Hdac4 protein_coding protein_coding MGP_CBAJ_T0021057.1 MGP_CBAJ_G0016056.1 mouse_genomes_project 1 100179295 100403475 - MGP_CBAJ_P0021057 Hdac4 protein_coding protein_coding MGP_CBAJ_T0021058.1 MGP_CBAJ_G0016056.1 mouse_genomes_project 1 100179496 100255639 - Hdac4 protein_coding processed_transcript MGP_CBAJ_T0021059.1 MGP_CBAJ_G0016056.1 mouse_genomes_project 1 100179741 100181403 - Hdac4 protein_coding retained_intron MGP_CBAJ_T0021060.1 MGP_CBAJ_G0016056.1 mouse_genomes_project 1 100204170 100224300 - MGP_CBAJ_P0021060 Hdac4 protein_coding protein_coding MGP_CBAJ_T0021061.1 MGP_CBAJ_G0016056.1 mouse_genomes_project 1 100237831 100241407 - Hdac4 protein_coding retained_intron MGP_CBAJ_T0021062.1 MGP_CBAJ_G0016056.1 mouse_genomes_project 1 100252453 100255644 - Hdac4 protein_coding retained_intron MGP_CBAJ_T0021063.1 MGP_CBAJ_G0016056.1 mouse_genomes_project 1 100280920 100439609 - MGP_CBAJ_P0021063 Hdac4 protein_coding protein_coding MGP_CBAJ_T0021064.1 MGP_CBAJ_G0016056.1 mouse_genomes_project 1 100280931 100366700 - Hdac4 protein_coding processed_transcript MGP_CBAJ_T0021065.1 MGP_CBAJ_G0016056.1 mouse_genomes_project 1 100281015 100366700 - Hdac4 protein_coding processed_transcript MGP_CBAJ_T0020842.1 MGP_CBAJ_G0016008.1 mouse_genomes_project 1 95073018 95108587 - MGP_CBAJ_P0020842 Ngef protein_coding protein_coding MGP_CBAJ_T0020843.1 MGP_CBAJ_G0016008.1 mouse_genomes_project 1 95073018 95183335 - MGP_CBAJ_P0020843 Ngef protein_coding protein_coding MGP_CBAJ_T0020844.1 MGP_CBAJ_G0016008.1 mouse_genomes_project 1 95074869 95082356 - MGP_CBAJ_P0020844 Ngef protein_coding protein_coding MGP_CBAJ_T0020845.1 MGP_CBAJ_G0016008.1 mouse_genomes_project 1 95075913 95082396 - Ngef protein_coding retained_intron MGP_CBAJ_T0009436.1 MGP_CBAJ_G0007574.1 mouse_genomes_project 1 192373352 192373424 - Gm44339 miRNA miRNA MGP_CBAJ_T0009442.1 MGP_CBAJ_G0007580.1 mouse_genomes_project 1 205473596 205473665 + Mir664 miRNA miRNA MGP_CBAJ_T0005581.1 MGP_CBAJ_G0004692.1 mouse_genomes_project 1 24526828 24527480 - Gm29414 lincRNA lincRNA MGP_CBAJ_T0022415.1 MGP_CBAJ_G0016349.1 mouse_genomes_project 1 170579735 170959411 - MGP_CBAJ_P0022415 Cacna1e protein_coding protein_coding MGP_CBAJ_T0022416.1 MGP_CBAJ_G0016349.1 mouse_genomes_project 1 170581523 170958975 - MGP_CBAJ_P0022416 Cacna1e protein_coding protein_coding MGP_CBAJ_T0022417.1 MGP_CBAJ_G0016349.1 mouse_genomes_project 1 170587397 170958974 - MGP_CBAJ_P0022417 Cacna1e protein_coding unknown_likely_coding MGP_CBAJ_T0022418.1 MGP_CBAJ_G0016349.1 mouse_genomes_project 1 170684430 170692053 - Cacna1e protein_coding retained_intron MGP_CBAJ_T0022419.1 MGP_CBAJ_G0016349.1 mouse_genomes_project 1 170696431 171056367 - Cacna1e protein_coding retained_intron MGP_CBAJ_T0022420.1 MGP_CBAJ_G0016349.1 mouse_genomes_project 1 170932209 171135077 - Cacna1e protein_coding retained_intron MGP_CBAJ_T0022421.1 MGP_CBAJ_G0016349.1 mouse_genomes_project 1 171132741 171134600 - Cacna1e protein_coding retained_intron MGP_CBAJ_T0099776.1 MGP_CBAJ_G0038031.1 mouse_genomes_project 1 93773643 93773713 - Snord82 snoRNA snoRNA MGP_CBAJ_T0016831.1 MGP_CBAJ_G0014865.1 mouse_genomes_project 1 190884420 190899357 - 4933439K11Rik processed_transcript lincRNA MGP_CBAJ_T0016832.1 MGP_CBAJ_G0014865.1 mouse_genomes_project 1 190887911 190899494 - 4933439K11Rik processed_transcript lincRNA MGP_CBAJ_T0016833.1 MGP_CBAJ_G0014865.1 mouse_genomes_project 1 190897937 190906798 - 4933439K11Rik processed_transcript antisense MGP_CBAJ_T0005724.1 MGP_CBAJ_G0004794.1 mouse_genomes_project 1 87124026 87156910 + 1700016L21Rik lincRNA lincRNA MGP_CBAJ_T0005725.1 MGP_CBAJ_G0004794.1 mouse_genomes_project 1 87124034 87161117 + 1700016L21Rik lincRNA lincRNA MGP_CBAJ_T0000580.1 MGP_CBAJ_G0000522.1 mouse_genomes_project 1 140894408 140896904 + TEC TEC MGP_CBAJ_T0099793.1 MGP_CBAJ_G0038048.1 mouse_genomes_project 1 140047031 140047140 + Gm23734 snoRNA snoRNA MGP_CBAJ_T0019146.1 MGP_CBAJ_G0015685.1 mouse_genomes_project 1 39161342 39164948 + MGP_CBAJ_P0019146 Lipt1 protein_coding protein_coding MGP_CBAJ_T0019147.1 MGP_CBAJ_G0015685.1 mouse_genomes_project 1 39161810 39165833 + MGP_CBAJ_P0019147 Lipt1 protein_coding protein_coding MGP_CBAJ_T0019148.1 MGP_CBAJ_G0015685.1 mouse_genomes_project 1 39161978 39165065 + MGP_CBAJ_P0019148 Lipt1 protein_coding protein_coding MGP_CBAJ_T0019149.1 MGP_CBAJ_G0015685.1 mouse_genomes_project 1 39162166 39165159 + MGP_CBAJ_P0019149 Lipt1 protein_coding protein_coding MGP_CBAJ_T0005664.1 MGP_CBAJ_G0004751.1 mouse_genomes_project 1 65943065 65977178 + Gm11588 lincRNA lincRNA MGP_CBAJ_T0019881.1 MGP_CBAJ_G0015822.1 mouse_genomes_project 1 65337672 65370624 + Ctla4 protein_coding processed_transcript MGP_CBAJ_T0019882.1 MGP_CBAJ_G0015822.1 mouse_genomes_project 1 65366932 65373736 + MGP_CBAJ_P0019882 Ctla4 protein_coding protein_coding MGP_CBAJ_T0019883.1 MGP_CBAJ_G0015822.1 mouse_genomes_project 1 65367078 65372673 + MGP_CBAJ_P0019883 Ctla4 protein_coding protein_coding MGP_CBAJ_T0022077.1 MGP_CBAJ_G0016281.1 mouse_genomes_project 1 150126221 150127298 - MGP_CBAJ_P0022077 Gpr25 protein_coding protein_coding MGP_CBAJ_T0011979.1 MGP_CBAJ_G0010091.1 mouse_genomes_project 1 87036346 87038428 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000682.1 MGP_CBAJ_G0000622.1 mouse_genomes_project 1 177693142 177697171 + TEC TEC MGP_CBAJ_T0023993.1 MGP_CBAJ_G0016694.1 mouse_genomes_project 1 214256164 214265939 + MGP_CBAJ_P0023993 A130010J15Rik protein_coding protein_coding MGP_CBAJ_T0023995.1 MGP_CBAJ_G0016694.1 mouse_genomes_project 1 214261587 214264418 + MGP_CBAJ_P0023995 A130010J15Rik protein_coding protein_coding MGP_CBAJ_T0023996.1 MGP_CBAJ_G0016694.1 mouse_genomes_project 1 214261611 214262951 + MGP_CBAJ_P0023996 A130010J15Rik protein_coding protein_coding MGP_CBAJ_T0023997.1 MGP_CBAJ_G0016694.1 mouse_genomes_project 1 214261696 214265939 + MGP_CBAJ_P0023997 A130010J15Rik protein_coding protein_coding MGP_CBAJ_T0023998.1 MGP_CBAJ_G0016694.1 mouse_genomes_project 1 214261699 214264420 + MGP_CBAJ_P0023998 A130010J15Rik protein_coding protein_coding MGP_CBAJ_T0023999.1 MGP_CBAJ_G0016694.1 mouse_genomes_project 1 214261699 214262546 + MGP_CBAJ_P0023999 A130010J15Rik protein_coding protein_coding MGP_CBAJ_T0024000.1 MGP_CBAJ_G0016694.1 mouse_genomes_project 1 214261705 214262672 + MGP_CBAJ_P0024000 A130010J15Rik protein_coding protein_coding MGP_CBAJ_T0024001.1 MGP_CBAJ_G0016694.1 mouse_genomes_project 1 214261863 214262715 + MGP_CBAJ_P0024001 A130010J15Rik protein_coding protein_coding MGP_CBAJ_T0098558.1 MGP_CBAJ_G0036813.1 mouse_genomes_project 1 130396772 130396902 + Gm23497 snRNA snRNA MGP_CBAJ_T0005813.1 MGP_CBAJ_G0004868.1 mouse_genomes_project 1 145321050 145352063 + Gm26892 lincRNA lincRNA MGP_CBAJ_T0000493.1 MGP_CBAJ_G0000435.1 mouse_genomes_project 1 86762940 86764772 - TEC TEC MGP_CBAJ_T0011960.1 MGP_CBAJ_G0010072.1 mouse_genomes_project 1 74823697 74824448 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101450.1 MGP_CBAJ_G0039482.1 mouse_genomes_project 1 63181848 63194001 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0011881.1 MGP_CBAJ_G0009993.1 mouse_genomes_project 1 51431789 51435482 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011845.1 MGP_CBAJ_G0009957.1 mouse_genomes_project 1 36945287 36946191 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0022162.1 MGP_CBAJ_G0016300.1 mouse_genomes_project 1 154112210 154459244 - MGP_CBAJ_P0022162 Cfh protein_coding protein_coding MGP_CBAJ_T0022163.1 MGP_CBAJ_G0016300.1 mouse_genomes_project 1 154346446 154459375 - MGP_CBAJ_P0022163 Cfh protein_coding protein_coding MGP_CBAJ_T0022164.1 MGP_CBAJ_G0016300.1 mouse_genomes_project 1 154346449 154459284 - MGP_CBAJ_P0022164 Cfh protein_coding protein_coding MGP_CBAJ_T0022165.1 MGP_CBAJ_G0016300.1 mouse_genomes_project 1 154346450 154459375 - MGP_CBAJ_P0022165 Cfh protein_coding protein_coding MGP_CBAJ_T0022166.1 MGP_CBAJ_G0016300.1 mouse_genomes_project 1 154346453 154408416 - MGP_CBAJ_P0022166 Cfh protein_coding protein_coding MGP_CBAJ_T0022167.1 MGP_CBAJ_G0016300.1 mouse_genomes_project 1 154346470 154459286 - MGP_CBAJ_P0022167 Cfh protein_coding nonsense_mediated_decay MGP_CBAJ_T0022168.1 MGP_CBAJ_G0016300.1 mouse_genomes_project 1 154459097 154459728 - Cfh protein_coding retained_intron MGP_CBAJ_T0023023.1 MGP_CBAJ_G0016466.1 mouse_genomes_project 1 188165105 188187880 - MGP_CBAJ_P0023023 Uhmk1 protein_coding protein_coding MGP_CBAJ_T0023024.1 MGP_CBAJ_G0016466.1 mouse_genomes_project 1 188165105 188189665 - MGP_CBAJ_P0023024 Uhmk1 protein_coding protein_coding MGP_CBAJ_T0023025.1 MGP_CBAJ_G0016466.1 mouse_genomes_project 1 188165105 188189665 - MGP_CBAJ_P0023025 Uhmk1 protein_coding protein_coding MGP_CBAJ_T0012225.1 MGP_CBAJ_G0010337.1 mouse_genomes_project 1 212351952 212352534 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011824.1 MGP_CBAJ_G0009936.1 mouse_genomes_project 1 32200829 32201662 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000405.1 MGP_CBAJ_G0000347.1 mouse_genomes_project 1 34695167 34697605 + TEC TEC MGP_CBAJ_T0101472.1 MGP_CBAJ_G0039504.1 mouse_genomes_project 1 106238883 106392611 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0023898.1 MGP_CBAJ_G0016674.1 mouse_genomes_project 1 212003008 212016719 + Batf3 protein_coding processed_transcript MGP_CBAJ_T0023899.1 MGP_CBAJ_G0016674.1 mouse_genomes_project 1 212003041 212017178 + Batf3 protein_coding processed_transcript MGP_CBAJ_T0023900.1 MGP_CBAJ_G0016674.1 mouse_genomes_project 1 212003480 212017176 + MGP_CBAJ_P0023900 Batf3 protein_coding protein_coding MGP_CBAJ_T0023901.1 MGP_CBAJ_G0016674.1 mouse_genomes_project 1 212003538 212016719 + Batf3 protein_coding processed_transcript MGP_CBAJ_T0023902.1 MGP_CBAJ_G0016674.1 mouse_genomes_project 1 212005613 212017142 + Batf3 protein_coding retained_intron MGP_CBAJ_T0101479.1 MGP_CBAJ_G0039511.1 mouse_genomes_project 1 117251503 117257519 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0000772.1 MGP_CBAJ_G0000709.1 mouse_genomes_project 1 216236182 216239119 + TEC TEC MGP_CBAJ_T0019904.1 MGP_CBAJ_G0015827.1 mouse_genomes_project 1 67812642 67814008 - Ndufs1 protein_coding retained_intron MGP_CBAJ_T0019905.1 MGP_CBAJ_G0015827.1 mouse_genomes_project 1 67812642 67855069 - MGP_CBAJ_P0019905 Ndufs1 protein_coding protein_coding MGP_CBAJ_T0019906.1 MGP_CBAJ_G0015827.1 mouse_genomes_project 1 67812650 67816767 - Ndufs1 protein_coding retained_intron MGP_CBAJ_T0019907.1 MGP_CBAJ_G0015827.1 mouse_genomes_project 1 67812735 67816435 - MGP_CBAJ_P0019907 Ndufs1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019908.1 MGP_CBAJ_G0015827.1 mouse_genomes_project 1 67812781 67854979 - MGP_CBAJ_P0019908 Ndufs1 protein_coding protein_coding MGP_CBAJ_T0019909.1 MGP_CBAJ_G0015827.1 mouse_genomes_project 1 67819112 67854910 - MGP_CBAJ_P0019909 Ndufs1 protein_coding protein_coding MGP_CBAJ_T0019910.1 MGP_CBAJ_G0015827.1 mouse_genomes_project 1 67819279 67821684 - Ndufs1 protein_coding retained_intron MGP_CBAJ_T0019911.1 MGP_CBAJ_G0015827.1 mouse_genomes_project 1 67825524 67854916 - Ndufs1 protein_coding retained_intron MGP_CBAJ_T0019912.1 MGP_CBAJ_G0015827.1 mouse_genomes_project 1 67828204 67854914 - Ndufs1 protein_coding retained_intron MGP_CBAJ_T0019913.1 MGP_CBAJ_G0015827.1 mouse_genomes_project 1 67833129 67854937 - MGP_CBAJ_P0019913 Ndufs1 protein_coding protein_coding MGP_CBAJ_T0019914.1 MGP_CBAJ_G0015827.1 mouse_genomes_project 1 67834303 67854913 - MGP_CBAJ_P0019914 Ndufs1 protein_coding protein_coding MGP_CBAJ_T0019915.1 MGP_CBAJ_G0015827.1 mouse_genomes_project 1 67841580 67855040 - MGP_CBAJ_P0019915 Ndufs1 protein_coding protein_coding MGP_CBAJ_T0019916.1 MGP_CBAJ_G0015827.1 mouse_genomes_project 1 67846900 67855080 - MGP_CBAJ_P0019916 Ndufs1 protein_coding protein_coding MGP_CBAJ_T0022887.1 MGP_CBAJ_G0016436.1 mouse_genomes_project 1 183090201 183136193 - MGP_CBAJ_P0022887 Mpzl1 protein_coding protein_coding MGP_CBAJ_T0022888.1 MGP_CBAJ_G0016436.1 mouse_genomes_project 1 183091339 183105826 - MGP_CBAJ_P0022888 Mpzl1 protein_coding protein_coding MGP_CBAJ_T0022889.1 MGP_CBAJ_G0016436.1 mouse_genomes_project 1 183091378 183136313 - MGP_CBAJ_P0022889 Mpzl1 protein_coding protein_coding MGP_CBAJ_T0022890.1 MGP_CBAJ_G0016436.1 mouse_genomes_project 1 183101855 183110647 - Mpzl1 protein_coding processed_transcript MGP_CBAJ_T0022891.1 MGP_CBAJ_G0016436.1 mouse_genomes_project 1 183104258 183105782 - Mpzl1 protein_coding retained_intron MGP_CBAJ_T0022892.1 MGP_CBAJ_G0016436.1 mouse_genomes_project 1 183105672 183113928 - Mpzl1 protein_coding processed_transcript MGP_CBAJ_T0022893.1 MGP_CBAJ_G0016436.1 mouse_genomes_project 1 183105740 183136242 - MGP_CBAJ_P0022893 Mpzl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022894.1 MGP_CBAJ_G0016436.1 mouse_genomes_project 1 183108466 183135886 - Mpzl1 protein_coding processed_transcript MGP_CBAJ_T0011830.1 MGP_CBAJ_G0009942.1 mouse_genomes_project 1 34209502 34209920 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021928.1 MGP_CBAJ_G0016252.1 mouse_genomes_project 1 148202748 148211505 - MGP_CBAJ_P0021928 Mgat4e protein_coding protein_coding MGP_CBAJ_T0021929.1 MGP_CBAJ_G0016252.1 mouse_genomes_project 1 148202754 148208814 - MGP_CBAJ_P0021929 Mgat4e protein_coding protein_coding MGP_CBAJ_T0021930.1 MGP_CBAJ_G0016252.1 mouse_genomes_project 1 148202764 148208742 - MGP_CBAJ_P0021930 Mgat4e protein_coding nonsense_mediated_decay MGP_CBAJ_T0018468.1 MGP_CBAJ_G0015558.1 mouse_genomes_project 1 2065580 2157476 + MGP_CBAJ_P0018468 Gm37988 protein_coding nonsense_mediated_decay MGP_CBAJ_T0005737.1 MGP_CBAJ_G0004805.1 mouse_genomes_project 1 96669396 96670243 + Platr5 lincRNA lincRNA MGP_CBAJ_T0005738.1 MGP_CBAJ_G0004805.1 mouse_genomes_project 1 96669460 96670216 + Platr5 lincRNA lincRNA MGP_CBAJ_T0012136.1 MGP_CBAJ_G0010248.1 mouse_genomes_project 1 164453193 164453418 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0019562.1 MGP_CBAJ_G0015769.1 mouse_genomes_project 1 58179871 58183145 - Ankrd44 protein_coding retained_intron MGP_CBAJ_T0019563.1 MGP_CBAJ_G0015769.1 mouse_genomes_project 1 58179871 58495090 - MGP_CBAJ_P0019563 Ankrd44 protein_coding protein_coding MGP_CBAJ_T0019564.1 MGP_CBAJ_G0015769.1 mouse_genomes_project 1 58179873 58495090 - MGP_CBAJ_P0019564 Ankrd44 protein_coding protein_coding MGP_CBAJ_T0019565.1 MGP_CBAJ_G0015769.1 mouse_genomes_project 1 58183628 58192013 - MGP_CBAJ_P0019565 Ankrd44 protein_coding protein_coding MGP_CBAJ_T0019566.1 MGP_CBAJ_G0015769.1 mouse_genomes_project 1 58186200 58313443 - MGP_CBAJ_P0019566 Ankrd44 protein_coding protein_coding MGP_CBAJ_T0019567.1 MGP_CBAJ_G0015769.1 mouse_genomes_project 1 58189430 58227559 - Ankrd44 protein_coding retained_intron MGP_CBAJ_T0019568.1 MGP_CBAJ_G0015769.1 mouse_genomes_project 1 58201512 58267868 - Ankrd44 protein_coding retained_intron MGP_CBAJ_T0019569.1 MGP_CBAJ_G0015769.1 mouse_genomes_project 1 58267359 58269215 - Ankrd44 protein_coding retained_intron MGP_CBAJ_T0019570.1 MGP_CBAJ_G0015769.1 mouse_genomes_project 1 58274727 58281394 - Ankrd44 protein_coding retained_intron MGP_CBAJ_T0019571.1 MGP_CBAJ_G0015769.1 mouse_genomes_project 1 58281051 58495057 - Ankrd44 protein_coding retained_intron MGP_CBAJ_T0019572.1 MGP_CBAJ_G0015769.1 mouse_genomes_project 1 58289048 58316138 - Ankrd44 protein_coding retained_intron MGP_CBAJ_T0019573.1 MGP_CBAJ_G0015769.1 mouse_genomes_project 1 58310295 58318510 - Ankrd44 protein_coding processed_transcript MGP_CBAJ_T0019574.1 MGP_CBAJ_G0015769.1 mouse_genomes_project 1 58310613 58495090 - Ankrd44 protein_coding retained_intron MGP_CBAJ_T0019575.1 MGP_CBAJ_G0015769.1 mouse_genomes_project 1 58312094 58379245 - Ankrd44 protein_coding processed_transcript MGP_CBAJ_T0019576.1 MGP_CBAJ_G0015769.1 mouse_genomes_project 1 58316506 58455495 - MGP_CBAJ_P0019576 Ankrd44 protein_coding protein_coding MGP_CBAJ_T0005870.1 MGP_CBAJ_G0004914.1 mouse_genomes_project 1 176880469 176883100 - Gm37294 lincRNA lincRNA MGP_CBAJ_T0005965.1 MGP_CBAJ_G0004987.1 mouse_genomes_project 1 212047092 212048450 + Gm38161 lincRNA lincRNA MGP_CBAJ_T0011946.1 MGP_CBAJ_G0010058.1 mouse_genomes_project 1 69839986 69840365 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021280.1 MGP_CBAJ_G0016106.1 mouse_genomes_project 1 115574625 115714795 - MGP_CBAJ_P0021280 Pign protein_coding protein_coding MGP_CBAJ_T0021281.1 MGP_CBAJ_G0016106.1 mouse_genomes_project 1 115574629 115719500 - MGP_CBAJ_P0021281 Pign protein_coding protein_coding MGP_CBAJ_T0021282.1 MGP_CBAJ_G0016106.1 mouse_genomes_project 1 115577362 115626806 - Pign protein_coding processed_transcript MGP_CBAJ_T0021283.1 MGP_CBAJ_G0016106.1 mouse_genomes_project 1 115605919 115719481 - MGP_CBAJ_P0021283 Pign protein_coding protein_coding MGP_CBAJ_T0021284.1 MGP_CBAJ_G0016106.1 mouse_genomes_project 1 115612340 115719500 - MGP_CBAJ_P0021284 Pign protein_coding protein_coding MGP_CBAJ_T0021285.1 MGP_CBAJ_G0016106.1 mouse_genomes_project 1 115702402 115719515 - Pign protein_coding retained_intron MGP_CBAJ_T0021286.1 MGP_CBAJ_G0016106.1 mouse_genomes_project 1 115702402 115719514 - Pign protein_coding retained_intron MGP_CBAJ_T0021287.1 MGP_CBAJ_G0016106.1 mouse_genomes_project 1 115702557 115705430 - Pign protein_coding retained_intron MGP_CBAJ_T0021288.1 MGP_CBAJ_G0016106.1 mouse_genomes_project 1 115714045 115719511 - Pign protein_coding retained_intron MGP_CBAJ_T0021289.1 MGP_CBAJ_G0016106.1 mouse_genomes_project 1 115714974 115719510 - Pign protein_coding retained_intron MGP_CBAJ_T0005646.1 MGP_CBAJ_G0004737.1 mouse_genomes_project 1 59642116 59695799 + 9130227L01Rik lincRNA lincRNA MGP_CBAJ_T0005647.1 MGP_CBAJ_G0004737.1 mouse_genomes_project 1 59681896 59696029 + 9130227L01Rik lincRNA lincRNA MGP_CBAJ_T0022048.1 MGP_CBAJ_G0016275.1 mouse_genomes_project 1 149845855 149878012 + MGP_CBAJ_P0022048 Tmem9 protein_coding protein_coding MGP_CBAJ_T0022049.1 MGP_CBAJ_G0016275.1 mouse_genomes_project 1 149855624 149879087 + MGP_CBAJ_P0022049 Tmem9 protein_coding protein_coding MGP_CBAJ_T0022050.1 MGP_CBAJ_G0016275.1 mouse_genomes_project 1 149855719 149878037 + MGP_CBAJ_P0022050 Tmem9 protein_coding protein_coding MGP_CBAJ_T0022051.1 MGP_CBAJ_G0016275.1 mouse_genomes_project 1 149870745 149878144 + Tmem9 protein_coding retained_intron MGP_CBAJ_T0022052.1 MGP_CBAJ_G0016275.1 mouse_genomes_project 1 149876998 149878525 + Tmem9 protein_coding processed_transcript MGP_CBAJ_T0023198.1 MGP_CBAJ_G0016504.1 mouse_genomes_project 1 189809440 189824594 + MGP_CBAJ_P0023198 Cd244 protein_coding protein_coding MGP_CBAJ_T0023199.1 MGP_CBAJ_G0016504.1 mouse_genomes_project 1 189820031 189824594 + Cd244 protein_coding retained_intron MGP_CBAJ_T0000718.1 MGP_CBAJ_G0000658.1 mouse_genomes_project 1 196118512 196120044 - TEC TEC MGP_CBAJ_T0016768.1 MGP_CBAJ_G0014849.1 mouse_genomes_project 1 145802966 145816251 - 6030442K20Rik processed_transcript antisense MGP_CBAJ_T0016769.1 MGP_CBAJ_G0014849.1 mouse_genomes_project 1 145815264 145816270 - 6030442K20Rik processed_transcript retained_intron MGP_CBAJ_T0005765.1 MGP_CBAJ_G0004831.1 mouse_genomes_project 1 107284883 107291589 + 1810006J02Rik lincRNA lincRNA MGP_CBAJ_T0005766.1 MGP_CBAJ_G0004831.1 mouse_genomes_project 1 107284894 107298045 + 1810006J02Rik lincRNA lincRNA MGP_CBAJ_T0009350.1 MGP_CBAJ_G0007488.1 mouse_genomes_project 1 11388553 11388635 + Gm27881 miRNA miRNA MGP_CBAJ_T0000554.1 MGP_CBAJ_G0000496.1 mouse_genomes_project 1 122645673 122646209 + TEC TEC MGP_CBAJ_T0005612.1 MGP_CBAJ_G0004717.1 mouse_genomes_project 1 44134954 44135417 - Gm29664 lincRNA lincRNA MGP_CBAJ_T0011770.1 MGP_CBAJ_G0009882.1 mouse_genomes_project 1 14134198 14134298 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002918.1 MGP_CBAJ_G0002740.1 mouse_genomes_project 1 211001684 211048143 + Prox1os antisense antisense MGP_CBAJ_T0021649.1 MGP_CBAJ_G0016190.1 mouse_genomes_project 1 144350629 144365219 - MGP_CBAJ_P0021649 Dyrk3 protein_coding protein_coding MGP_CBAJ_T0021650.1 MGP_CBAJ_G0016190.1 mouse_genomes_project 1 144353049 144365124 - MGP_CBAJ_P0021650 Dyrk3 protein_coding protein_coding MGP_CBAJ_T0018959.1 MGP_CBAJ_G0015652.1 mouse_genomes_project 1 35295942 35297238 + Ptpn18 protein_coding retained_intron MGP_CBAJ_T0018960.1 MGP_CBAJ_G0015652.1 mouse_genomes_project 1 35295945 35311839 + MGP_CBAJ_P0018960 Ptpn18 protein_coding protein_coding MGP_CBAJ_T0018961.1 MGP_CBAJ_G0015652.1 mouse_genomes_project 1 35295957 35309974 + MGP_CBAJ_P0018961 Ptpn18 protein_coding protein_coding MGP_CBAJ_T0018962.1 MGP_CBAJ_G0015652.1 mouse_genomes_project 1 35295972 35309973 + Ptpn18 protein_coding retained_intron MGP_CBAJ_T0018963.1 MGP_CBAJ_G0015652.1 mouse_genomes_project 1 35299452 35305121 + Ptpn18 protein_coding retained_intron MGP_CBAJ_T0018964.1 MGP_CBAJ_G0015652.1 mouse_genomes_project 1 35310774 35313813 + MGP_CBAJ_P0018964 Ptpn18 protein_coding protein_coding MGP_CBAJ_T0018965.1 MGP_CBAJ_G0015652.1 mouse_genomes_project 1 35312553 35313813 + Ptpn18 protein_coding processed_transcript MGP_CBAJ_T0018887.1 MGP_CBAJ_G0015640.1 mouse_genomes_project 1 31540446 31648901 - MGP_CBAJ_P0018887 4931428L18Rik protein_coding protein_coding MGP_CBAJ_T0018888.1 MGP_CBAJ_G0015640.1 mouse_genomes_project 1 31546383 31648961 - MGP_CBAJ_P0018888 4931428L18Rik protein_coding protein_coding MGP_CBAJ_T0018889.1 MGP_CBAJ_G0015640.1 mouse_genomes_project 1 31546936 31648932 - MGP_CBAJ_P0018889 4931428L18Rik protein_coding protein_coding MGP_CBAJ_T0018892.1 MGP_CBAJ_G0015640.1 mouse_genomes_project 1 31626109 31648988 - MGP_CBAJ_P0018892 4931428L18Rik protein_coding protein_coding MGP_CBAJ_T0020578.1 MGP_CBAJ_G0015951.1 mouse_genomes_project 1 86830573 86853564 - MGP_CBAJ_P0020578 Fam124b protein_coding protein_coding MGP_CBAJ_T0020579.1 MGP_CBAJ_G0015951.1 mouse_genomes_project 1 86832190 86858085 - Fam124b protein_coding processed_transcript MGP_CBAJ_T0018901.1 MGP_CBAJ_G0015645.1 mouse_genomes_project 1 34469753 34476517 + Rab23 protein_coding processed_transcript MGP_CBAJ_T0018902.1 MGP_CBAJ_G0015645.1 mouse_genomes_project 1 34469753 34479571 + Rab23 protein_coding retained_intron MGP_CBAJ_T0018903.1 MGP_CBAJ_G0015645.1 mouse_genomes_project 1 34469761 34497360 + MGP_CBAJ_P0018903 Rab23 protein_coding protein_coding MGP_CBAJ_T0018904.1 MGP_CBAJ_G0015645.1 mouse_genomes_project 1 34469775 34497353 + MGP_CBAJ_P0018904 Rab23 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018905.1 MGP_CBAJ_G0015645.1 mouse_genomes_project 1 34469776 34478156 + Rab23 protein_coding retained_intron MGP_CBAJ_T0018906.1 MGP_CBAJ_G0015645.1 mouse_genomes_project 1 34470004 34488046 + Rab23 protein_coding retained_intron MGP_CBAJ_T0018907.1 MGP_CBAJ_G0015645.1 mouse_genomes_project 1 34470273 34497357 + MGP_CBAJ_P0018907 Rab23 protein_coding protein_coding MGP_CBAJ_T0018908.1 MGP_CBAJ_G0015645.1 mouse_genomes_project 1 34487219 34495507 + Rab23 protein_coding retained_intron MGP_CBAJ_T0018909.1 MGP_CBAJ_G0015645.1 mouse_genomes_project 1 34489293 34494166 + Rab23 protein_coding retained_intron MGP_CBAJ_T0018910.1 MGP_CBAJ_G0015645.1 mouse_genomes_project 1 34492932 34495568 + Rab23 protein_coding retained_intron MGP_CBAJ_T0022859.1 MGP_CBAJ_G0016431.1 mouse_genomes_project 1 182686144 182715217 - MGP_CBAJ_P0022859 Tiprl protein_coding protein_coding MGP_CBAJ_T0022860.1 MGP_CBAJ_G0016431.1 mouse_genomes_project 1 182688775 182706765 - MGP_CBAJ_P0022860 Tiprl protein_coding protein_coding MGP_CBAJ_T0022861.1 MGP_CBAJ_G0016431.1 mouse_genomes_project 1 182689440 182690386 - Tiprl protein_coding retained_intron MGP_CBAJ_T0022862.1 MGP_CBAJ_G0016431.1 mouse_genomes_project 1 182689584 182715270 - MGP_CBAJ_P0022862 Tiprl protein_coding nonsense_mediated_decay MGP_CBAJ_T0022863.1 MGP_CBAJ_G0016431.1 mouse_genomes_project 1 182698395 182715196 - Tiprl protein_coding processed_transcript MGP_CBAJ_T0022864.1 MGP_CBAJ_G0016431.1 mouse_genomes_project 1 182706700 182715206 - Tiprl protein_coding processed_transcript MGP_CBAJ_T0002827.1 MGP_CBAJ_G0002664.1 mouse_genomes_project 1 148514238 148526523 + Gm28892 antisense antisense MGP_CBAJ_T0098248.1 MGP_CBAJ_G0036520.1 mouse_genomes_project 1 177656441 177657081 - Gm37328 sense_intronic sense_intronic MGP_CBAJ_T0022623.1 MGP_CBAJ_G0016382.1 mouse_genomes_project 1 177064857 177070475 + MGP_CBAJ_P0022623 Mrps14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022624.1 MGP_CBAJ_G0016382.1 mouse_genomes_project 1 177064857 177073471 + MGP_CBAJ_P0022624 Mrps14 protein_coding protein_coding MGP_CBAJ_T0022625.1 MGP_CBAJ_G0016382.1 mouse_genomes_project 1 177064945 177070467 + MGP_CBAJ_P0022625 Mrps14 protein_coding protein_coding MGP_CBAJ_T0019785.1 MGP_CBAJ_G0015808.1 mouse_genomes_project 1 63729567 63734099 + MGP_CBAJ_P0019785 Fzd7 protein_coding protein_coding MGP_CBAJ_T0020912.1 MGP_CBAJ_G0016021.1 mouse_genomes_project 1 95934169 95995691 + MGP_CBAJ_P0020912 Ugt1a5 protein_coding protein_coding MGP_CBAJ_T0005644.1 MGP_CBAJ_G0004735.1 mouse_genomes_project 1 55663876 55726919 + Gm553 lincRNA lincRNA MGP_CBAJ_T0012162.1 MGP_CBAJ_G0010274.1 mouse_genomes_project 1 174202998 174203196 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0019975.1 MGP_CBAJ_G0015841.1 mouse_genomes_project 1 69680958 69864914 - MGP_CBAJ_P0019975 Plekhm3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019976.1 MGP_CBAJ_G0015841.1 mouse_genomes_project 1 69684107 69864914 - MGP_CBAJ_P0019976 Plekhm3 protein_coding protein_coding MGP_CBAJ_T0019977.1 MGP_CBAJ_G0015841.1 mouse_genomes_project 1 69688787 69733051 - Plekhm3 protein_coding processed_transcript MGP_CBAJ_T0019978.1 MGP_CBAJ_G0015841.1 mouse_genomes_project 1 69756554 69830607 - Plekhm3 protein_coding retained_intron MGP_CBAJ_T0019979.1 MGP_CBAJ_G0015841.1 mouse_genomes_project 1 69843629 69864865 - MGP_CBAJ_P0019979 Plekhm3 protein_coding protein_coding MGP_CBAJ_T0019980.1 MGP_CBAJ_G0015841.1 mouse_genomes_project 1 69861253 69864817 - Plekhm3 protein_coding processed_transcript MGP_CBAJ_T0002936.1 MGP_CBAJ_G0002751.1 mouse_genomes_project 1 214392148 214393282 - Gm37650 antisense antisense MGP_CBAJ_T0000752.1 MGP_CBAJ_G0000690.1 mouse_genomes_project 1 207706560 207711163 + TEC TEC MGP_CBAJ_T0012139.1 MGP_CBAJ_G0010251.1 mouse_genomes_project 1 164726988 164728524 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0022157.1 MGP_CBAJ_G0016298.1 mouse_genomes_project 1 153930082 154022247 - MGP_CBAJ_P0022157 protein_coding protein_coding MGP_CBAJ_T0022158.1 MGP_CBAJ_G0016298.1 mouse_genomes_project 1 153930082 154022290 - MGP_CBAJ_P0022158 protein_coding protein_coding MGP_CBAJ_T0022159.1 MGP_CBAJ_G0016298.1 mouse_genomes_project 1 153930091 154022283 - MGP_CBAJ_P0022159 protein_coding protein_coding MGP_CBAJ_T0005569.1 MGP_CBAJ_G0004681.1 mouse_genomes_project 1 15687194 15691895 + Gm28784 lincRNA lincRNA MGP_CBAJ_T0000569.1 MGP_CBAJ_G0000511.1 mouse_genomes_project 1 136152945 136155807 - TEC TEC MGP_CBAJ_T0005675.1 MGP_CBAJ_G0004758.1 mouse_genomes_project 1 68769515 68773781 + Gm13749 lincRNA lincRNA MGP_CBAJ_T0018490.1 MGP_CBAJ_G0015562.1 mouse_genomes_project 1 2927490 2930346 + Oprk1 protein_coding retained_intron MGP_CBAJ_T0018491.1 MGP_CBAJ_G0015562.1 mouse_genomes_project 1 2927517 2945561 + MGP_CBAJ_P0018491 Oprk1 protein_coding protein_coding MGP_CBAJ_T0018492.1 MGP_CBAJ_G0015562.1 mouse_genomes_project 1 2927581 2942292 + MGP_CBAJ_P0018492 Oprk1 protein_coding protein_coding MGP_CBAJ_T0018493.1 MGP_CBAJ_G0015562.1 mouse_genomes_project 1 2927965 2943440 + MGP_CBAJ_P0018493 Oprk1 protein_coding protein_coding MGP_CBAJ_T0018494.1 MGP_CBAJ_G0015562.1 mouse_genomes_project 1 2935576 2942579 + Oprk1 protein_coding retained_intron MGP_CBAJ_T0020997.1 MGP_CBAJ_G0016045.1 mouse_genomes_project 1 99425584 99454589 + Ube2f protein_coding retained_intron MGP_CBAJ_T0020998.1 MGP_CBAJ_G0016045.1 mouse_genomes_project 1 99425591 99464852 + MGP_CBAJ_P0020998 Ube2f protein_coding protein_coding MGP_CBAJ_T0020999.1 MGP_CBAJ_G0016045.1 mouse_genomes_project 1 99425599 99465137 + MGP_CBAJ_P0020999 Ube2f protein_coding protein_coding MGP_CBAJ_T0021000.1 MGP_CBAJ_G0016045.1 mouse_genomes_project 1 99425617 99469477 + MGP_CBAJ_P0021000 Ube2f protein_coding protein_coding MGP_CBAJ_T0021001.1 MGP_CBAJ_G0016045.1 mouse_genomes_project 1 99425645 99464885 + MGP_CBAJ_P0021001 Ube2f protein_coding protein_coding MGP_CBAJ_T0021002.1 MGP_CBAJ_G0016045.1 mouse_genomes_project 1 99425846 99465039 + MGP_CBAJ_P0021002 Ube2f protein_coding protein_coding MGP_CBAJ_T0021003.1 MGP_CBAJ_G0016045.1 mouse_genomes_project 1 99425936 99444708 + MGP_CBAJ_P0021003 Ube2f protein_coding protein_coding MGP_CBAJ_T0021004.1 MGP_CBAJ_G0016045.1 mouse_genomes_project 1 99444057 99455554 + Ube2f protein_coding retained_intron MGP_CBAJ_T0021005.1 MGP_CBAJ_G0016045.1 mouse_genomes_project 1 99454060 99455662 + Ube2f protein_coding retained_intron MGP_CBAJ_T0021006.1 MGP_CBAJ_G0016045.1 mouse_genomes_project 1 99455220 99464503 + Ube2f protein_coding retained_intron MGP_CBAJ_T0021007.1 MGP_CBAJ_G0016045.1 mouse_genomes_project 1 99462758 99464128 + Ube2f protein_coding retained_intron MGP_CBAJ_T0005599.1 MGP_CBAJ_G0004708.1 mouse_genomes_project 1 37399947 37400663 + 4930403P22Rik lincRNA lincRNA MGP_CBAJ_T0002745.1 MGP_CBAJ_G0002605.1 mouse_genomes_project 1 63350346 63370563 + Gm29017 antisense antisense MGP_CBAJ_T0005912.1 MGP_CBAJ_G0004949.1 mouse_genomes_project 1 196783979 196785359 - 2310043L19Rik lincRNA lincRNA MGP_CBAJ_T0005628.1 MGP_CBAJ_G0004722.1 mouse_genomes_project 1 45250375 45305704 - Gm29040 lincRNA lincRNA MGP_CBAJ_T0012014.1 MGP_CBAJ_G0010126.1 mouse_genomes_project 1 104016795 104017643 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101507.1 MGP_CBAJ_G0039539.1 mouse_genomes_project 1 197234947 197235190 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0002833.1 MGP_CBAJ_G0002670.1 mouse_genomes_project 1 150074191 150083185 + Gm26568 antisense antisense MGP_CBAJ_T0012114.1 MGP_CBAJ_G0010226.1 mouse_genomes_project 1 153013249 153013472 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023216.1 MGP_CBAJ_G0016511.1 mouse_genomes_project 1 190192998 190226689 + MGP_CBAJ_P0023216 Slamf6 protein_coding protein_coding MGP_CBAJ_T0023217.1 MGP_CBAJ_G0016511.1 mouse_genomes_project 1 190193020 190217180 + MGP_CBAJ_P0023217 Slamf6 protein_coding protein_coding MGP_CBAJ_T0023218.1 MGP_CBAJ_G0016511.1 mouse_genomes_project 1 190193165 190194162 + Slamf6 protein_coding retained_intron MGP_CBAJ_T0023219.1 MGP_CBAJ_G0016511.1 mouse_genomes_project 1 190193191 190221384 + MGP_CBAJ_P0023219 Slamf6 protein_coding protein_coding MGP_CBAJ_T0023220.1 MGP_CBAJ_G0016511.1 mouse_genomes_project 1 190194972 190207516 + MGP_CBAJ_P0023220 Slamf6 protein_coding protein_coding MGP_CBAJ_T0023221.1 MGP_CBAJ_G0016511.1 mouse_genomes_project 1 190204933 190207853 + Slamf6 protein_coding retained_intron MGP_CBAJ_T0023222.1 MGP_CBAJ_G0016511.1 mouse_genomes_project 1 190215896 190222179 + Slamf6 protein_coding processed_transcript MGP_CBAJ_T0024019.1 MGP_CBAJ_G0016697.1 mouse_genomes_project 1 214309811 214334825 - MGP_CBAJ_P0024019 Hsd11b1 protein_coding protein_coding MGP_CBAJ_T0024020.1 MGP_CBAJ_G0016697.1 mouse_genomes_project 1 214309859 214333798 - MGP_CBAJ_P0024020 Hsd11b1 protein_coding protein_coding MGP_CBAJ_T0024021.1 MGP_CBAJ_G0016697.1 mouse_genomes_project 1 214309866 214357676 - MGP_CBAJ_P0024021 Hsd11b1 protein_coding protein_coding MGP_CBAJ_T0024022.1 MGP_CBAJ_G0016697.1 mouse_genomes_project 1 214311818 214335756 - MGP_CBAJ_P0024022 Hsd11b1 protein_coding protein_coding MGP_CBAJ_T0024023.1 MGP_CBAJ_G0016697.1 mouse_genomes_project 1 214317511 214332602 - MGP_CBAJ_P0024023 Hsd11b1 protein_coding protein_coding MGP_CBAJ_T0024024.1 MGP_CBAJ_G0016697.1 mouse_genomes_project 1 214329234 214331215 - Hsd11b1 protein_coding retained_intron MGP_CBAJ_T0024025.1 MGP_CBAJ_G0016697.1 mouse_genomes_project 1 214330461 214333624 - Hsd11b1 protein_coding processed_transcript MGP_CBAJ_T0023181.1 MGP_CBAJ_G0016500.1 mouse_genomes_project 1 189609571 189618468 + MGP_CBAJ_P0023181 Usf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023182.1 MGP_CBAJ_G0016500.1 mouse_genomes_project 1 189609571 189622089 + MGP_CBAJ_P0023182 Usf1 protein_coding protein_coding MGP_CBAJ_T0023183.1 MGP_CBAJ_G0016500.1 mouse_genomes_project 1 189609571 189617326 + MGP_CBAJ_P0023183 Usf1 protein_coding protein_coding MGP_CBAJ_T0023184.1 MGP_CBAJ_G0016500.1 mouse_genomes_project 1 189609584 189616085 + Usf1 protein_coding processed_transcript MGP_CBAJ_T0023185.1 MGP_CBAJ_G0016500.1 mouse_genomes_project 1 189609592 189617709 + Usf1 protein_coding retained_intron MGP_CBAJ_T0023186.1 MGP_CBAJ_G0016500.1 mouse_genomes_project 1 189609632 189615961 + Usf1 protein_coding retained_intron MGP_CBAJ_T0023187.1 MGP_CBAJ_G0016500.1 mouse_genomes_project 1 189609642 189621704 + MGP_CBAJ_P0023187 Usf1 protein_coding protein_coding MGP_CBAJ_T0023188.1 MGP_CBAJ_G0016500.1 mouse_genomes_project 1 189609939 189621690 + MGP_CBAJ_P0023188 Usf1 protein_coding protein_coding MGP_CBAJ_T0023189.1 MGP_CBAJ_G0016500.1 mouse_genomes_project 1 189617812 189621387 + Usf1 protein_coding retained_intron MGP_CBAJ_T0024032.1 MGP_CBAJ_G0016699.1 mouse_genomes_project 1 214451737 214477668 - MGP_CBAJ_P0024032 Camk1g protein_coding protein_coding MGP_CBAJ_T0024033.1 MGP_CBAJ_G0016699.1 mouse_genomes_project 1 214451737 214477595 - MGP_CBAJ_P0024033 Camk1g protein_coding protein_coding MGP_CBAJ_T0024034.1 MGP_CBAJ_G0016699.1 mouse_genomes_project 1 214454141 214465223 - MGP_CBAJ_P0024034 Camk1g protein_coding protein_coding MGP_CBAJ_T0024035.1 MGP_CBAJ_G0016699.1 mouse_genomes_project 1 214460233 214477615 - Camk1g protein_coding retained_intron MGP_CBAJ_T0020805.1 MGP_CBAJ_G0016003.1 mouse_genomes_project 1 94759631 94772325 + MGP_CBAJ_P0020805 Eif4e2 protein_coding protein_coding MGP_CBAJ_T0020806.1 MGP_CBAJ_G0016003.1 mouse_genomes_project 1 94759631 94786201 + MGP_CBAJ_P0020806 Eif4e2 protein_coding protein_coding MGP_CBAJ_T0020807.1 MGP_CBAJ_G0016003.1 mouse_genomes_project 1 94759631 94780424 + MGP_CBAJ_P0020807 Eif4e2 protein_coding protein_coding MGP_CBAJ_T0020808.1 MGP_CBAJ_G0016003.1 mouse_genomes_project 1 94759631 94786201 + MGP_CBAJ_P0020808 Eif4e2 protein_coding protein_coding MGP_CBAJ_T0020809.1 MGP_CBAJ_G0016003.1 mouse_genomes_project 1 94759631 94774574 + MGP_CBAJ_P0020809 Eif4e2 protein_coding protein_coding MGP_CBAJ_T0020810.1 MGP_CBAJ_G0016003.1 mouse_genomes_project 1 94759656 94772318 + MGP_CBAJ_P0020810 Eif4e2 protein_coding protein_coding MGP_CBAJ_T0020811.1 MGP_CBAJ_G0016003.1 mouse_genomes_project 1 94759696 94771591 + MGP_CBAJ_P0020811 Eif4e2 protein_coding protein_coding MGP_CBAJ_T0020812.1 MGP_CBAJ_G0016003.1 mouse_genomes_project 1 94760003 94773782 + MGP_CBAJ_P0020812 Eif4e2 protein_coding protein_coding MGP_CBAJ_T0022576.1 MGP_CBAJ_G0016375.1 mouse_genomes_project 1 174904229 175019307 - MGP_CBAJ_P0022576 Brinp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022577.1 MGP_CBAJ_G0016375.1 mouse_genomes_project 1 174904229 175019404 - MGP_CBAJ_P0022577 Brinp2 protein_coding protein_coding MGP_CBAJ_T0022578.1 MGP_CBAJ_G0016375.1 mouse_genomes_project 1 174961588 174962348 - Brinp2 protein_coding processed_transcript MGP_CBAJ_T0022579.1 MGP_CBAJ_G0016375.1 mouse_genomes_project 1 175015386 175019373 - Brinp2 protein_coding retained_intron MGP_CBAJ_T0099787.1 MGP_CBAJ_G0038042.1 mouse_genomes_project 1 120200384 120200514 - Gm22159 snoRNA snoRNA MGP_CBAJ_T0000486.1 MGP_CBAJ_G0000428.1 mouse_genomes_project 1 81071373 81072948 + TEC TEC MGP_CBAJ_T0012173.1 MGP_CBAJ_G0010285.1 mouse_genomes_project 1 181064168 181065210 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021787.1 MGP_CBAJ_G0016218.1 mouse_genomes_project 1 146269923 146329539 + MGP_CBAJ_P0021787 Lrrn2 protein_coding protein_coding MGP_CBAJ_T0021788.1 MGP_CBAJ_G0016218.1 mouse_genomes_project 1 146270005 146326684 + Lrrn2 protein_coding processed_transcript MGP_CBAJ_T0005658.1 MGP_CBAJ_G0004745.1 mouse_genomes_project 1 63735610 63739736 - Gm26813 lincRNA lincRNA MGP_CBAJ_T0022800.1 MGP_CBAJ_G0016415.1 mouse_genomes_project 1 181260852 181286447 + MGP_CBAJ_P0022800 Scyl3 protein_coding protein_coding MGP_CBAJ_T0022801.1 MGP_CBAJ_G0016415.1 mouse_genomes_project 1 181261509 181286871 + MGP_CBAJ_P0022801 Scyl3 protein_coding protein_coding MGP_CBAJ_T0022802.1 MGP_CBAJ_G0016415.1 mouse_genomes_project 1 181261534 181286855 + MGP_CBAJ_P0022802 Scyl3 protein_coding protein_coding MGP_CBAJ_T0022803.1 MGP_CBAJ_G0016415.1 mouse_genomes_project 1 181261549 181286854 + MGP_CBAJ_P0022803 Scyl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022804.1 MGP_CBAJ_G0016415.1 mouse_genomes_project 1 181272859 181286859 + MGP_CBAJ_P0022804 Scyl3 protein_coding protein_coding MGP_CBAJ_T0022805.1 MGP_CBAJ_G0016415.1 mouse_genomes_project 1 181275515 181276589 + Scyl3 protein_coding processed_transcript MGP_CBAJ_T0022807.1 MGP_CBAJ_G0016415.1 mouse_genomes_project 1 181282957 181285547 + Scyl3 protein_coding retained_intron MGP_CBAJ_T0000476.1 MGP_CBAJ_G0000418.1 mouse_genomes_project 1 74060038 74062407 - TEC TEC MGP_CBAJ_T0000526.1 MGP_CBAJ_G0000468.1 mouse_genomes_project 1 97491226 97493610 + TEC TEC MGP_CBAJ_T0020000.1 MGP_CBAJ_G0015850.1 mouse_genomes_project 1 70077826 70098358 - MGP_CBAJ_P0020000 Idh1 protein_coding protein_coding MGP_CBAJ_T0020001.1 MGP_CBAJ_G0015850.1 mouse_genomes_project 1 70077828 70105653 - MGP_CBAJ_P0020001 Idh1 protein_coding protein_coding MGP_CBAJ_T0020002.1 MGP_CBAJ_G0015850.1 mouse_genomes_project 1 70085405 70105612 - MGP_CBAJ_P0020002 Idh1 protein_coding protein_coding MGP_CBAJ_T0020003.1 MGP_CBAJ_G0015850.1 mouse_genomes_project 1 70085450 70105674 - MGP_CBAJ_P0020003 Idh1 protein_coding protein_coding MGP_CBAJ_T0020004.1 MGP_CBAJ_G0015850.1 mouse_genomes_project 1 70087795 70094731 - MGP_CBAJ_P0020004 Idh1 protein_coding protein_coding MGP_CBAJ_T0020005.1 MGP_CBAJ_G0015850.1 mouse_genomes_project 1 70090324 70105633 - MGP_CBAJ_P0020005 Idh1 protein_coding protein_coding MGP_CBAJ_T0020006.1 MGP_CBAJ_G0015850.1 mouse_genomes_project 1 70094464 70105653 - MGP_CBAJ_P0020006 Idh1 protein_coding protein_coding MGP_CBAJ_T0020484.1 MGP_CBAJ_G0015933.1 mouse_genomes_project 1 81589022 81595075 + MGP_CBAJ_P0020484 Tmem198 protein_coding protein_coding MGP_CBAJ_T0020485.1 MGP_CBAJ_G0015933.1 mouse_genomes_project 1 81589066 81591994 + MGP_CBAJ_P0020485 Tmem198 protein_coding protein_coding MGP_CBAJ_T0020486.1 MGP_CBAJ_G0015933.1 mouse_genomes_project 1 81589070 81595087 + MGP_CBAJ_P0020486 Tmem198 protein_coding protein_coding MGP_CBAJ_T0020487.1 MGP_CBAJ_G0015933.1 mouse_genomes_project 1 81589194 81592057 + MGP_CBAJ_P0020487 Tmem198 protein_coding protein_coding MGP_CBAJ_T0020240.1 MGP_CBAJ_G0015895.1 mouse_genomes_project 1 80564855 80591288 + MGP_CBAJ_P0020240 Cnot9 protein_coding protein_coding MGP_CBAJ_T0020241.1 MGP_CBAJ_G0015895.1 mouse_genomes_project 1 80564857 80587493 + Cnot9 protein_coding processed_transcript MGP_CBAJ_T0020242.1 MGP_CBAJ_G0015895.1 mouse_genomes_project 1 80583931 80588624 + Cnot9 protein_coding retained_intron MGP_CBAJ_T0012111.1 MGP_CBAJ_G0010223.1 mouse_genomes_project 1 152275082 152275566 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005712.1 MGP_CBAJ_G0004784.1 mouse_genomes_project 1 83142306 83301636 - Gm816 lincRNA lincRNA MGP_CBAJ_T0005630.1 MGP_CBAJ_G0004724.1 mouse_genomes_project 1 45809452 45809951 - Gm29156 lincRNA lincRNA MGP_CBAJ_T0020509.1 MGP_CBAJ_G0015936.1 mouse_genomes_project 1 81664135 81682552 + MGP_CBAJ_P0020509 Slc4a3 protein_coding protein_coding MGP_CBAJ_T0020510.1 MGP_CBAJ_G0015936.1 mouse_genomes_project 1 81666714 81667926 + Slc4a3 protein_coding retained_intron MGP_CBAJ_T0020511.1 MGP_CBAJ_G0015936.1 mouse_genomes_project 1 81666880 81668457 + MGP_CBAJ_P0020511 Slc4a3 protein_coding protein_coding MGP_CBAJ_T0020512.1 MGP_CBAJ_G0015936.1 mouse_genomes_project 1 81666914 81679267 + MGP_CBAJ_P0020512 Slc4a3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020513.1 MGP_CBAJ_G0015936.1 mouse_genomes_project 1 81666945 81668163 + Slc4a3 protein_coding retained_intron MGP_CBAJ_T0020514.1 MGP_CBAJ_G0015936.1 mouse_genomes_project 1 81666951 81668430 + MGP_CBAJ_P0020514 Slc4a3 protein_coding protein_coding MGP_CBAJ_T0020515.1 MGP_CBAJ_G0015936.1 mouse_genomes_project 1 81667062 81681259 + Slc4a3 protein_coding retained_intron MGP_CBAJ_T0020516.1 MGP_CBAJ_G0015936.1 mouse_genomes_project 1 81667074 81667953 + Slc4a3 protein_coding retained_intron MGP_CBAJ_T0020517.1 MGP_CBAJ_G0015936.1 mouse_genomes_project 1 81670017 81671801 + MGP_CBAJ_P0020517 Slc4a3 protein_coding protein_coding MGP_CBAJ_T0020518.1 MGP_CBAJ_G0015936.1 mouse_genomes_project 1 81670186 81671548 + Slc4a3 protein_coding retained_intron MGP_CBAJ_T0020519.1 MGP_CBAJ_G0015936.1 mouse_genomes_project 1 81671013 81675551 + MGP_CBAJ_P0020519 Slc4a3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020520.1 MGP_CBAJ_G0015936.1 mouse_genomes_project 1 81672127 81674151 + MGP_CBAJ_P0020520 Slc4a3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0009450.1 MGP_CBAJ_G0007588.1 mouse_genomes_project 1 216283348 216283436 + Mir29c miRNA miRNA MGP_CBAJ_T0019059.1 MGP_CBAJ_G0015672.1 mouse_genomes_project 1 37644314 37797292 - MGP_CBAJ_P0019059 Fam178b protein_coding protein_coding MGP_CBAJ_T0019060.1 MGP_CBAJ_G0015672.1 mouse_genomes_project 1 37644318 37674893 - Fam178b protein_coding processed_transcript MGP_CBAJ_T0019061.1 MGP_CBAJ_G0015672.1 mouse_genomes_project 1 37644318 37670872 - Fam178b protein_coding processed_transcript MGP_CBAJ_T0019062.1 MGP_CBAJ_G0015672.1 mouse_genomes_project 1 37644318 37684239 - MGP_CBAJ_P0019062 Fam178b protein_coding nonsense_mediated_decay MGP_CBAJ_T0019063.1 MGP_CBAJ_G0015672.1 mouse_genomes_project 1 37645950 37684782 - MGP_CBAJ_P0019063 Fam178b protein_coding nonsense_mediated_decay MGP_CBAJ_T0019064.1 MGP_CBAJ_G0015672.1 mouse_genomes_project 1 37646486 37669241 - Fam178b protein_coding processed_transcript MGP_CBAJ_T0019065.1 MGP_CBAJ_G0015672.1 mouse_genomes_project 1 37658022 37684260 - Fam178b protein_coding processed_transcript MGP_CBAJ_T0019066.1 MGP_CBAJ_G0015672.1 mouse_genomes_project 1 37683803 37797292 - MGP_CBAJ_P0019066 Fam178b protein_coding protein_coding MGP_CBAJ_T0011821.1 MGP_CBAJ_G0009933.1 mouse_genomes_project 1 31724946 31725587 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011855.1 MGP_CBAJ_G0009967.1 mouse_genomes_project 1 45432609 45432989 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005636.1 MGP_CBAJ_G0004729.1 mouse_genomes_project 1 53807251 53817014 + lincRNA lincRNA MGP_CBAJ_T0009392.1 MGP_CBAJ_G0007530.1 mouse_genomes_project 1 91356165 91356278 - Mir6353 miRNA miRNA MGP_CBAJ_T0011783.1 MGP_CBAJ_G0009895.1 mouse_genomes_project 1 18121263 18121735 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0020934.1 MGP_CBAJ_G0016032.1 mouse_genomes_project 1 97462654 97937229 + MGP_CBAJ_P0020934 Agap1 protein_coding protein_coding MGP_CBAJ_T0020935.1 MGP_CBAJ_G0016032.1 mouse_genomes_project 1 97462722 97929623 + MGP_CBAJ_P0020935 Agap1 protein_coding protein_coding MGP_CBAJ_T0020936.1 MGP_CBAJ_G0016032.1 mouse_genomes_project 1 97463104 97467513 + Agap1 protein_coding retained_intron MGP_CBAJ_T0020937.1 MGP_CBAJ_G0016032.1 mouse_genomes_project 1 97601282 97934889 + MGP_CBAJ_P0020937 Agap1 protein_coding protein_coding MGP_CBAJ_T0020938.1 MGP_CBAJ_G0016032.1 mouse_genomes_project 1 97601793 97928516 + MGP_CBAJ_P0020938 Agap1 protein_coding unknown_likely_coding MGP_CBAJ_T0000441.1 MGP_CBAJ_G0000383.1 mouse_genomes_project 1 58638859 58640653 - TEC TEC MGP_CBAJ_T0023362.1 MGP_CBAJ_G0016553.1 mouse_genomes_project 1 192813117 192834675 - MGP_CBAJ_P0023362 protein_coding protein_coding MGP_CBAJ_T0023364.1 MGP_CBAJ_G0016553.1 mouse_genomes_project 1 192827882 192834675 - protein_coding retained_intron MGP_CBAJ_T0023977.1 MGP_CBAJ_G0016691.1 mouse_genomes_project 1 213963495 214117572 - MGP_CBAJ_P0023977 Syt14 protein_coding protein_coding MGP_CBAJ_T0023978.1 MGP_CBAJ_G0016691.1 mouse_genomes_project 1 213968249 214117459 - MGP_CBAJ_P0023978 Syt14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023979.1 MGP_CBAJ_G0016691.1 mouse_genomes_project 1 213969473 214117514 - MGP_CBAJ_P0023979 Syt14 protein_coding protein_coding MGP_CBAJ_T0023980.1 MGP_CBAJ_G0016691.1 mouse_genomes_project 1 214007794 214117441 - Syt14 protein_coding retained_intron MGP_CBAJ_T0020370.1 MGP_CBAJ_G0015919.1 mouse_genomes_project 1 81271643 81272516 - Glb1l protein_coding processed_transcript MGP_CBAJ_T0020371.1 MGP_CBAJ_G0015919.1 mouse_genomes_project 1 81271650 81284376 - MGP_CBAJ_P0020371 Glb1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0020372.1 MGP_CBAJ_G0015919.1 mouse_genomes_project 1 81272498 81274585 - Glb1l protein_coding retained_intron MGP_CBAJ_T0020373.1 MGP_CBAJ_G0015919.1 mouse_genomes_project 1 81272754 81284376 - MGP_CBAJ_P0020373 Glb1l protein_coding protein_coding MGP_CBAJ_T0020374.1 MGP_CBAJ_G0015919.1 mouse_genomes_project 1 81272898 81283021 - MGP_CBAJ_P0020374 Glb1l protein_coding protein_coding MGP_CBAJ_T0020375.1 MGP_CBAJ_G0015919.1 mouse_genomes_project 1 81272898 81276303 - MGP_CBAJ_P0020375 Glb1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0020376.1 MGP_CBAJ_G0015919.1 mouse_genomes_project 1 81273236 81283092 - Glb1l protein_coding retained_intron MGP_CBAJ_T0020377.1 MGP_CBAJ_G0015919.1 mouse_genomes_project 1 81273500 81274661 - Glb1l protein_coding retained_intron MGP_CBAJ_T0020378.1 MGP_CBAJ_G0015919.1 mouse_genomes_project 1 81274364 81275708 - Glb1l protein_coding retained_intron MGP_CBAJ_T0020379.1 MGP_CBAJ_G0015919.1 mouse_genomes_project 1 81274618 81275236 - Glb1l protein_coding retained_intron MGP_CBAJ_T0020380.1 MGP_CBAJ_G0015919.1 mouse_genomes_project 1 81276131 81284411 - MGP_CBAJ_P0020380 Glb1l protein_coding protein_coding MGP_CBAJ_T0020381.1 MGP_CBAJ_G0015919.1 mouse_genomes_project 1 81281630 81284351 - Glb1l protein_coding retained_intron MGP_CBAJ_T0098598.1 MGP_CBAJ_G0036853.1 mouse_genomes_project 1 212783549 212783663 - Gm26203 snRNA snRNA MGP_CBAJ_T0012226.1 MGP_CBAJ_G0010338.1 mouse_genomes_project 1 212447306 212447771 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098570.1 MGP_CBAJ_G0036825.1 mouse_genomes_project 1 150960571 150960631 - Gm23763 snRNA snRNA MGP_CBAJ_T0005588.1 MGP_CBAJ_G0004699.1 mouse_genomes_project 1 35259556 35265816 - Gm37233 lincRNA lincRNA MGP_CBAJ_T0000471.1 MGP_CBAJ_G0000413.1 mouse_genomes_project 1 71925343 71930045 - TEC TEC MGP_CBAJ_T0021938.1 MGP_CBAJ_G0016254.1 mouse_genomes_project 1 148312850 148417454 + MGP_CBAJ_P0021938 protein_coding protein_coding MGP_CBAJ_T0021939.1 MGP_CBAJ_G0016254.1 mouse_genomes_project 1 148413412 148428736 + MGP_CBAJ_P0021939 protein_coding unknown_likely_coding MGP_CBAJ_T0021940.1 MGP_CBAJ_G0016254.1 mouse_genomes_project 1 148424170 148438189 + protein_coding processed_transcript MGP_CBAJ_T0002780.1 MGP_CBAJ_G0002630.1 mouse_genomes_project 1 94825930 94826624 - Efhd1os antisense antisense MGP_CBAJ_T0012205.1 MGP_CBAJ_G0010317.1 mouse_genomes_project 1 200561424 200561873 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002792.1 MGP_CBAJ_G0002642.1 mouse_genomes_project 1 102203738 102226600 + Gm10550 antisense antisense MGP_CBAJ_T0000410.1 MGP_CBAJ_G0000352.1 mouse_genomes_project 1 37022129 37023501 - TEC TEC MGP_CBAJ_T0005657.1 MGP_CBAJ_G0004744.1 mouse_genomes_project 1 63604290 63617510 + Gm29016 lincRNA lincRNA MGP_CBAJ_T0099788.1 MGP_CBAJ_G0038043.1 mouse_genomes_project 1 123367790 123367926 + Gm22331 snoRNA snoRNA MGP_CBAJ_T0000510.1 MGP_CBAJ_G0000452.1 mouse_genomes_project 1 91981932 91983969 - TEC TEC MGP_CBAJ_T0011851.1 MGP_CBAJ_G0009963.1 mouse_genomes_project 1 41960750 41961435 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011723.1 MGP_CBAJ_G0009835.1 mouse_genomes_project 1 1925280 1926486 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023756.1 MGP_CBAJ_G0016647.1 mouse_genomes_project 1 205091455 205204255 - MGP_CBAJ_P0023756 Mark1 protein_coding protein_coding MGP_CBAJ_T0023757.1 MGP_CBAJ_G0016647.1 mouse_genomes_project 1 205114087 205204160 - MGP_CBAJ_P0023757 Mark1 protein_coding protein_coding MGP_CBAJ_T0021931.1 MGP_CBAJ_G0016253.1 mouse_genomes_project 1 148221963 148301480 + MGP_CBAJ_P0021931 Kdm5b protein_coding protein_coding MGP_CBAJ_T0021932.1 MGP_CBAJ_G0016253.1 mouse_genomes_project 1 148221984 148297736 + MGP_CBAJ_P0021932 Kdm5b protein_coding protein_coding MGP_CBAJ_T0021933.1 MGP_CBAJ_G0016253.1 mouse_genomes_project 1 148221999 148272999 + Kdm5b protein_coding retained_intron MGP_CBAJ_T0021934.1 MGP_CBAJ_G0016253.1 mouse_genomes_project 1 148222092 148299025 + MGP_CBAJ_P0021934 Kdm5b protein_coding unknown_likely_coding MGP_CBAJ_T0021935.1 MGP_CBAJ_G0016253.1 mouse_genomes_project 1 148252422 148255133 + Kdm5b protein_coding retained_intron MGP_CBAJ_T0021936.1 MGP_CBAJ_G0016253.1 mouse_genomes_project 1 148288099 148291321 + Kdm5b protein_coding retained_intron MGP_CBAJ_T0021937.1 MGP_CBAJ_G0016253.1 mouse_genomes_project 1 148289017 148293421 + Kdm5b protein_coding retained_intron MGP_CBAJ_T0018671.1 MGP_CBAJ_G0015587.1 mouse_genomes_project 1 11695675 11723942 - MGP_CBAJ_P0018671 Tram1 protein_coding protein_coding MGP_CBAJ_T0018672.1 MGP_CBAJ_G0015587.1 mouse_genomes_project 1 11710174 11713827 - Tram1 protein_coding retained_intron MGP_CBAJ_T0018673.1 MGP_CBAJ_G0015587.1 mouse_genomes_project 1 11712148 11723907 - MGP_CBAJ_P0018673 Tram1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020132.1 MGP_CBAJ_G0015870.1 mouse_genomes_project 1 77920290 77972782 - MGP_CBAJ_P0020132 Mreg protein_coding protein_coding MGP_CBAJ_T0005682.1 MGP_CBAJ_G0004765.1 mouse_genomes_project 1 73294608 73296129 + Gm15671 lincRNA lincRNA MGP_CBAJ_T0021488.1 MGP_CBAJ_G0016154.1 mouse_genomes_project 1 133595312 133610266 - MGP_CBAJ_P0021488 Ddx18 protein_coding protein_coding MGP_CBAJ_T0021489.1 MGP_CBAJ_G0016154.1 mouse_genomes_project 1 133596619 133600625 - Ddx18 protein_coding retained_intron MGP_CBAJ_T0021490.1 MGP_CBAJ_G0016154.1 mouse_genomes_project 1 133598814 133602547 - MGP_CBAJ_P0021490 Ddx18 protein_coding protein_coding MGP_CBAJ_T0021491.1 MGP_CBAJ_G0016154.1 mouse_genomes_project 1 133606870 133609999 - Ddx18 protein_coding processed_transcript MGP_CBAJ_T0098549.1 MGP_CBAJ_G0036804.1 mouse_genomes_project 1 101793710 101793813 + Gm26446 snRNA snRNA MGP_CBAJ_T0020212.1 MGP_CBAJ_G0015890.1 mouse_genomes_project 1 80394794 80411022 + MGP_CBAJ_P0020212 Catip protein_coding protein_coding MGP_CBAJ_T0020213.1 MGP_CBAJ_G0015890.1 mouse_genomes_project 1 80394998 80402666 + MGP_CBAJ_P0020213 Catip protein_coding protein_coding MGP_CBAJ_T0020214.1 MGP_CBAJ_G0015890.1 mouse_genomes_project 1 80395074 80411099 + MGP_CBAJ_P0020214 Catip protein_coding protein_coding MGP_CBAJ_T0020215.1 MGP_CBAJ_G0015890.1 mouse_genomes_project 1 80397183 80401616 + Catip protein_coding retained_intron MGP_CBAJ_T0101503.1 MGP_CBAJ_G0039535.1 mouse_genomes_project 1 192980932 192982312 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0005827.1 MGP_CBAJ_G0004882.1 mouse_genomes_project 1 150497571 150500007 - 4933409D19Rik lincRNA lincRNA MGP_CBAJ_T0012220.1 MGP_CBAJ_G0010332.1 mouse_genomes_project 1 209754290 209758547 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0019150.1 MGP_CBAJ_G0015686.1 mouse_genomes_project 1 39164405 39180850 - MGP_CBAJ_P0019150 Mitd1 protein_coding protein_coding MGP_CBAJ_T0019151.1 MGP_CBAJ_G0015686.1 mouse_genomes_project 1 39168492 39180854 - MGP_CBAJ_P0019151 Mitd1 protein_coding protein_coding MGP_CBAJ_T0019152.1 MGP_CBAJ_G0015686.1 mouse_genomes_project 1 39168494 39169717 - Mitd1 protein_coding processed_transcript MGP_CBAJ_T0019153.1 MGP_CBAJ_G0015686.1 mouse_genomes_project 1 39168592 39171467 - Mitd1 protein_coding processed_transcript MGP_CBAJ_T0019154.1 MGP_CBAJ_G0015686.1 mouse_genomes_project 1 39171527 39180719 - Mitd1 protein_coding retained_intron MGP_CBAJ_T0012153.1 MGP_CBAJ_G0010265.1 mouse_genomes_project 1 171282508 171282719 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012120.1 MGP_CBAJ_G0010232.1 mouse_genomes_project 1 155627882 155628444 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0021367.1 MGP_CBAJ_G0016130.1 mouse_genomes_project 1 129404042 129424198 + MGP_CBAJ_P0021367 protein_coding protein_coding MGP_CBAJ_T0021901.1 MGP_CBAJ_G0016246.1 mouse_genomes_project 1 147986675 148005423 - MGP_CBAJ_P0021901 Tmem183a protein_coding protein_coding MGP_CBAJ_T0021902.1 MGP_CBAJ_G0016246.1 mouse_genomes_project 1 147988260 148005385 - MGP_CBAJ_P0021902 Tmem183a protein_coding nonsense_mediated_decay MGP_CBAJ_T0021903.1 MGP_CBAJ_G0016246.1 mouse_genomes_project 1 147988488 147993755 - Tmem183a protein_coding retained_intron MGP_CBAJ_T0021904.1 MGP_CBAJ_G0016246.1 mouse_genomes_project 1 147998891 148005397 - Tmem183a protein_coding retained_intron MGP_CBAJ_T0021905.1 MGP_CBAJ_G0016246.1 mouse_genomes_project 1 147999157 148005134 - MGP_CBAJ_P0021905 Tmem183a protein_coding protein_coding MGP_CBAJ_T0021418.1 MGP_CBAJ_G0016136.1 mouse_genomes_project 1 131207143 131217012 - MGP_CBAJ_P0021418 protein_coding protein_coding MGP_CBAJ_T0021088.1 MGP_CBAJ_G0016066.1 mouse_genomes_project 1 101202466 101233995 + MGP_CBAJ_P0021088 Gpc1 protein_coding protein_coding MGP_CBAJ_T0021089.1 MGP_CBAJ_G0016066.1 mouse_genomes_project 1 101202790 101206499 + Gpc1 protein_coding processed_transcript MGP_CBAJ_T0021090.1 MGP_CBAJ_G0016066.1 mouse_genomes_project 1 101224208 101226982 + Gpc1 protein_coding retained_intron MGP_CBAJ_T0021091.1 MGP_CBAJ_G0016066.1 mouse_genomes_project 1 101227575 101230741 + Gpc1 protein_coding retained_intron MGP_CBAJ_T0021092.1 MGP_CBAJ_G0016066.1 mouse_genomes_project 1 101227781 101230814 + Gpc1 protein_coding retained_intron MGP_CBAJ_T0011816.1 MGP_CBAJ_G0009928.1 mouse_genomes_project 1 31352514 31353158 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097864.1 MGP_CBAJ_G0036137.1 mouse_genomes_project 1 26704142 26704261 - n-R5s209 rRNA rRNA MGP_CBAJ_T0099759.1 MGP_CBAJ_G0038014.1 mouse_genomes_project 1 63263501 63263632 + Gm25502 snoRNA snoRNA MGP_CBAJ_T0099816.1 MGP_CBAJ_G0038071.1 mouse_genomes_project 1 178017043 178017120 + Snord80 snoRNA snoRNA MGP_CBAJ_T0022948.1 MGP_CBAJ_G0016446.1 mouse_genomes_project 1 183977515 184004919 - MGP_CBAJ_P0022948 Pogk protein_coding protein_coding MGP_CBAJ_T0022949.1 MGP_CBAJ_G0016446.1 mouse_genomes_project 1 183985120 184004528 - MGP_CBAJ_P0022949 Pogk protein_coding protein_coding MGP_CBAJ_T0022950.1 MGP_CBAJ_G0016446.1 mouse_genomes_project 1 183986506 184004965 - MGP_CBAJ_P0022950 Pogk protein_coding protein_coding MGP_CBAJ_T0022951.1 MGP_CBAJ_G0016446.1 mouse_genomes_project 1 183988289 184004924 - MGP_CBAJ_P0022951 Pogk protein_coding nonsense_mediated_decay MGP_CBAJ_T0022952.1 MGP_CBAJ_G0016446.1 mouse_genomes_project 1 183989061 184005000 - MGP_CBAJ_P0022952 Pogk protein_coding protein_coding MGP_CBAJ_T0022953.1 MGP_CBAJ_G0016446.1 mouse_genomes_project 1 183998509 184004426 - MGP_CBAJ_P0022953 Pogk protein_coding protein_coding MGP_CBAJ_T0022013.1 MGP_CBAJ_G0016270.1 mouse_genomes_project 1 149594998 149600569 + Tnni1 protein_coding processed_transcript MGP_CBAJ_T0022014.1 MGP_CBAJ_G0016270.1 mouse_genomes_project 1 149598532 149621536 + MGP_CBAJ_P0022014 Tnni1 protein_coding protein_coding MGP_CBAJ_T0022015.1 MGP_CBAJ_G0016270.1 mouse_genomes_project 1 149615357 149626926 + MGP_CBAJ_P0022015 Tnni1 protein_coding protein_coding MGP_CBAJ_T0022016.1 MGP_CBAJ_G0016270.1 mouse_genomes_project 1 149615376 149626571 + Tnni1 protein_coding processed_transcript MGP_CBAJ_T0022017.1 MGP_CBAJ_G0016270.1 mouse_genomes_project 1 149615376 149626926 + MGP_CBAJ_P0022017 Tnni1 protein_coding protein_coding MGP_CBAJ_T0022018.1 MGP_CBAJ_G0016270.1 mouse_genomes_project 1 149615466 149626637 + MGP_CBAJ_P0022018 Tnni1 protein_coding protein_coding MGP_CBAJ_T0022019.1 MGP_CBAJ_G0016270.1 mouse_genomes_project 1 149615474 149625679 + MGP_CBAJ_P0022019 Tnni1 protein_coding protein_coding MGP_CBAJ_T0022020.1 MGP_CBAJ_G0016270.1 mouse_genomes_project 1 149615788 149626926 + MGP_CBAJ_P0022020 Tnni1 protein_coding protein_coding MGP_CBAJ_T0022021.1 MGP_CBAJ_G0016270.1 mouse_genomes_project 1 149620969 149625853 + MGP_CBAJ_P0022021 Tnni1 protein_coding protein_coding MGP_CBAJ_T0023627.1 MGP_CBAJ_G0016619.1 mouse_genomes_project 1 200881397 200909014 + MGP_CBAJ_P0023627 Cnih4 protein_coding protein_coding MGP_CBAJ_T0023628.1 MGP_CBAJ_G0016619.1 mouse_genomes_project 1 200881425 200903155 + MGP_CBAJ_P0023628 Cnih4 protein_coding protein_coding MGP_CBAJ_T0023629.1 MGP_CBAJ_G0016619.1 mouse_genomes_project 1 200885605 200903331 + Cnih4 protein_coding processed_transcript MGP_CBAJ_T0023630.1 MGP_CBAJ_G0016619.1 mouse_genomes_project 1 200886587 200903299 + Cnih4 protein_coding retained_intron MGP_CBAJ_T0018796.1 MGP_CBAJ_G0015620.1 mouse_genomes_project 1 20193980 20211799 + MGP_CBAJ_P0018796 Tmem14a protein_coding protein_coding MGP_CBAJ_T0018797.1 MGP_CBAJ_G0015620.1 mouse_genomes_project 1 20194067 20211796 + MGP_CBAJ_P0018797 Tmem14a protein_coding protein_coding MGP_CBAJ_T0011721.1 MGP_CBAJ_G0009833.1 mouse_genomes_project 1 1831566 1832502 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098532.1 MGP_CBAJ_G0036787.1 mouse_genomes_project 1 65978143 65978246 + Gm25839 snRNA snRNA MGP_CBAJ_T0018580.1 MGP_CBAJ_G0015577.1 mouse_genomes_project 1 7800143 7814975 - MGP_CBAJ_P0018580 Cops5 protein_coding protein_coding MGP_CBAJ_T0018581.1 MGP_CBAJ_G0015577.1 mouse_genomes_project 1 7800385 7811977 - MGP_CBAJ_P0018581 Cops5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018582.1 MGP_CBAJ_G0015577.1 mouse_genomes_project 1 7802740 7814789 - MGP_CBAJ_P0018582 Cops5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018583.1 MGP_CBAJ_G0015577.1 mouse_genomes_project 1 7806221 7814997 - MGP_CBAJ_P0018583 Cops5 protein_coding protein_coding MGP_CBAJ_T0018584.1 MGP_CBAJ_G0015577.1 mouse_genomes_project 1 7807762 7814786 - Cops5 protein_coding retained_intron MGP_CBAJ_T0018585.1 MGP_CBAJ_G0015577.1 mouse_genomes_project 1 7809887 7815016 - Cops5 protein_coding retained_intron MGP_CBAJ_T0018586.1 MGP_CBAJ_G0015577.1 mouse_genomes_project 1 7814127 7814793 - Cops5 protein_coding retained_intron MGP_CBAJ_T0011745.1 MGP_CBAJ_G0009857.1 mouse_genomes_project 1 5357828 5361394 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0019508.1 MGP_CBAJ_G0015755.1 mouse_genomes_project 1 56111177 56152555 - MGP_CBAJ_P0019508 1700019D03Rik protein_coding protein_coding MGP_CBAJ_T0019509.1 MGP_CBAJ_G0015755.1 mouse_genomes_project 1 56111177 56142643 - MGP_CBAJ_P0019509 1700019D03Rik protein_coding protein_coding MGP_CBAJ_T0019510.1 MGP_CBAJ_G0015755.1 mouse_genomes_project 1 56111177 56142137 - MGP_CBAJ_P0019510 1700019D03Rik protein_coding protein_coding MGP_CBAJ_T0019511.1 MGP_CBAJ_G0015755.1 mouse_genomes_project 1 56115600 56205314 - MGP_CBAJ_P0019511 1700019D03Rik protein_coding protein_coding MGP_CBAJ_T0019512.1 MGP_CBAJ_G0015755.1 mouse_genomes_project 1 56115605 56161341 - MGP_CBAJ_P0019512 1700019D03Rik protein_coding protein_coding MGP_CBAJ_T0019513.1 MGP_CBAJ_G0015755.1 mouse_genomes_project 1 56115615 56177950 - MGP_CBAJ_P0019513 1700019D03Rik protein_coding protein_coding MGP_CBAJ_T0023390.1 MGP_CBAJ_G0016571.1 mouse_genomes_project 1 194015952 194438783 - MGP_CBAJ_P0023390 Rgs7 protein_coding unknown_likely_coding MGP_CBAJ_T0023391.1 MGP_CBAJ_G0016571.1 mouse_genomes_project 1 194015959 194438780 - MGP_CBAJ_P0023391 Rgs7 protein_coding protein_coding MGP_CBAJ_T0023392.1 MGP_CBAJ_G0016571.1 mouse_genomes_project 1 194015960 194438556 - MGP_CBAJ_P0023392 Rgs7 protein_coding protein_coding MGP_CBAJ_T0023393.1 MGP_CBAJ_G0016571.1 mouse_genomes_project 1 194016089 194438670 - MGP_CBAJ_P0023393 Rgs7 protein_coding protein_coding MGP_CBAJ_T0023394.1 MGP_CBAJ_G0016571.1 mouse_genomes_project 1 194016606 194437406 - MGP_CBAJ_P0023394 Rgs7 protein_coding protein_coding MGP_CBAJ_T0023395.1 MGP_CBAJ_G0016571.1 mouse_genomes_project 1 194016606 194044704 - MGP_CBAJ_P0023395 Rgs7 protein_coding protein_coding MGP_CBAJ_T0023396.1 MGP_CBAJ_G0016571.1 mouse_genomes_project 1 194016606 194044644 - MGP_CBAJ_P0023396 Rgs7 protein_coding protein_coding MGP_CBAJ_T0023397.1 MGP_CBAJ_G0016571.1 mouse_genomes_project 1 194016607 194036242 - MGP_CBAJ_P0023397 Rgs7 protein_coding protein_coding MGP_CBAJ_T0023398.1 MGP_CBAJ_G0016571.1 mouse_genomes_project 1 194032129 194035762 - Rgs7 protein_coding retained_intron MGP_CBAJ_T0020863.1 MGP_CBAJ_G0016011.1 mouse_genomes_project 1 95389240 95404941 + MGP_CBAJ_P0020863 Atg16l1 protein_coding protein_coding MGP_CBAJ_T0020864.1 MGP_CBAJ_G0016011.1 mouse_genomes_project 1 95389383 95431709 + MGP_CBAJ_P0020864 Atg16l1 protein_coding protein_coding MGP_CBAJ_T0020865.1 MGP_CBAJ_G0016011.1 mouse_genomes_project 1 95389426 95402928 + Atg16l1 protein_coding retained_intron MGP_CBAJ_T0020866.1 MGP_CBAJ_G0016011.1 mouse_genomes_project 1 95389446 95425526 + Atg16l1 protein_coding retained_intron MGP_CBAJ_T0020867.1 MGP_CBAJ_G0016011.1 mouse_genomes_project 1 95389446 95431703 + MGP_CBAJ_P0020867 Atg16l1 protein_coding protein_coding MGP_CBAJ_T0020868.1 MGP_CBAJ_G0016011.1 mouse_genomes_project 1 95389456 95431706 + MGP_CBAJ_P0020868 Atg16l1 protein_coding protein_coding MGP_CBAJ_T0020869.1 MGP_CBAJ_G0016011.1 mouse_genomes_project 1 95389458 95431706 + Atg16l1 protein_coding retained_intron MGP_CBAJ_T0020870.1 MGP_CBAJ_G0016011.1 mouse_genomes_project 1 95389463 95401511 + Atg16l1 protein_coding retained_intron MGP_CBAJ_T0020871.1 MGP_CBAJ_G0016011.1 mouse_genomes_project 1 95400428 95409104 + Atg16l1 protein_coding retained_intron MGP_CBAJ_T0020872.1 MGP_CBAJ_G0016011.1 mouse_genomes_project 1 95409526 95412918 + Atg16l1 protein_coding retained_intron MGP_CBAJ_T0020873.1 MGP_CBAJ_G0016011.1 mouse_genomes_project 1 95412417 95427889 + Atg16l1 protein_coding retained_intron MGP_CBAJ_T0019264.1 MGP_CBAJ_G0015710.1 mouse_genomes_project 1 42045057 42063930 + MGP_CBAJ_P0019264 Il1rl1 protein_coding protein_coding MGP_CBAJ_T0019265.1 MGP_CBAJ_G0015710.1 mouse_genomes_project 1 42053811 42058630 + MGP_CBAJ_P0019265 Il1rl1 protein_coding protein_coding MGP_CBAJ_T0019266.1 MGP_CBAJ_G0015710.1 mouse_genomes_project 1 42056849 42079833 + MGP_CBAJ_P0019266 Il1rl1 protein_coding protein_coding MGP_CBAJ_T0019267.1 MGP_CBAJ_G0015710.1 mouse_genomes_project 1 42056998 42065355 + MGP_CBAJ_P0019267 Il1rl1 protein_coding protein_coding MGP_CBAJ_T0019268.1 MGP_CBAJ_G0015710.1 mouse_genomes_project 1 42057850 42079814 + MGP_CBAJ_P0019268 Il1rl1 protein_coding protein_coding MGP_CBAJ_T0011891.1 MGP_CBAJ_G0010003.1 mouse_genomes_project 1 53486605 53486767 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005850.1 MGP_CBAJ_G0004899.1 mouse_genomes_project 1 166913881 166918205 + C730036E19Rik lincRNA lincRNA MGP_CBAJ_T0011720.1 MGP_CBAJ_G0009832.1 mouse_genomes_project 1 1757917 1758367 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000429.1 MGP_CBAJ_G0000371.1 mouse_genomes_project 1 46660475 46665990 + TEC TEC MGP_CBAJ_T0000538.1 MGP_CBAJ_G0000480.1 mouse_genomes_project 1 104569324 104571456 + TEC TEC MGP_CBAJ_T0000602.1 MGP_CBAJ_G0000543.1 mouse_genomes_project 1 147681231 147683986 - TEC TEC MGP_CBAJ_T0099730.1 MGP_CBAJ_G0037985.1 mouse_genomes_project 1 4788886 4789016 + Gm23274 snoRNA snoRNA MGP_CBAJ_T0005851.1 MGP_CBAJ_G0004900.1 mouse_genomes_project 1 167609373 167615444 - 2810414N06Rik lincRNA lincRNA MGP_CBAJ_T0000508.1 MGP_CBAJ_G0000450.1 mouse_genomes_project 1 91549622 91552542 - TEC TEC MGP_CBAJ_T0022645.1 MGP_CBAJ_G0016385.1 mouse_genomes_project 1 177856923 177937728 + MGP_CBAJ_P0022645 Rc3h1 protein_coding protein_coding MGP_CBAJ_T0022646.1 MGP_CBAJ_G0016385.1 mouse_genomes_project 1 177883710 177930558 + MGP_CBAJ_P0022646 Rc3h1 protein_coding protein_coding MGP_CBAJ_T0022647.1 MGP_CBAJ_G0016385.1 mouse_genomes_project 1 177908223 177909378 + Rc3h1 protein_coding retained_intron MGP_CBAJ_T0020603.1 MGP_CBAJ_G0015956.1 mouse_genomes_project 1 89114866 89117688 + MGP_CBAJ_P0020603 Gm9747 protein_coding protein_coding MGP_CBAJ_T0011776.1 MGP_CBAJ_G0009888.1 mouse_genomes_project 1 15939540 15940011 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002713.1 MGP_CBAJ_G0002580.1 mouse_genomes_project 1 38859179 38860292 + 4930556I23Rik antisense antisense MGP_CBAJ_T0000655.1 MGP_CBAJ_G0000595.1 mouse_genomes_project 1 172194445 172195192 - TEC TEC MGP_CBAJ_T0005730.1 MGP_CBAJ_G0004798.1 mouse_genomes_project 1 93340151 93357539 - Gm28100 lincRNA lincRNA MGP_CBAJ_T0020431.1 MGP_CBAJ_G0015926.1 mouse_genomes_project 1 81389791 81399534 - MGP_CBAJ_P0020431 Dnpep protein_coding protein_coding MGP_CBAJ_T0020432.1 MGP_CBAJ_G0015926.1 mouse_genomes_project 1 81389791 81399556 - MGP_CBAJ_P0020432 Dnpep protein_coding protein_coding MGP_CBAJ_T0020433.1 MGP_CBAJ_G0015926.1 mouse_genomes_project 1 81389835 81398890 - MGP_CBAJ_P0020433 Dnpep protein_coding protein_coding MGP_CBAJ_T0020434.1 MGP_CBAJ_G0015926.1 mouse_genomes_project 1 81390460 81398842 - MGP_CBAJ_P0020434 Dnpep protein_coding protein_coding MGP_CBAJ_T0020435.1 MGP_CBAJ_G0015926.1 mouse_genomes_project 1 81390460 81399046 - MGP_CBAJ_P0020435 Dnpep protein_coding protein_coding MGP_CBAJ_T0020436.1 MGP_CBAJ_G0015926.1 mouse_genomes_project 1 81391078 81395655 - Dnpep protein_coding retained_intron MGP_CBAJ_T0020437.1 MGP_CBAJ_G0015926.1 mouse_genomes_project 1 81394363 81399306 - Dnpep protein_coding retained_intron MGP_CBAJ_T0020438.1 MGP_CBAJ_G0015926.1 mouse_genomes_project 1 81396259 81398700 - MGP_CBAJ_P0020438 Dnpep protein_coding protein_coding MGP_CBAJ_T0020439.1 MGP_CBAJ_G0015926.1 mouse_genomes_project 1 81396262 81398918 - MGP_CBAJ_P0020439 Dnpep protein_coding protein_coding MGP_CBAJ_T0020440.1 MGP_CBAJ_G0015926.1 mouse_genomes_project 1 81397097 81399210 - MGP_CBAJ_P0020440 Dnpep protein_coding protein_coding MGP_CBAJ_T0020441.1 MGP_CBAJ_G0015926.1 mouse_genomes_project 1 81397879 81399344 - MGP_CBAJ_P0020441 Dnpep protein_coding protein_coding MGP_CBAJ_T0020442.1 MGP_CBAJ_G0015926.1 mouse_genomes_project 1 81398243 81399269 - Dnpep protein_coding retained_intron MGP_CBAJ_T0020443.1 MGP_CBAJ_G0015926.1 mouse_genomes_project 1 81398266 81399887 - MGP_CBAJ_P0020443 Dnpep protein_coding protein_coding MGP_CBAJ_T0020444.1 MGP_CBAJ_G0015926.1 mouse_genomes_project 1 81398450 81399279 - MGP_CBAJ_P0020444 Dnpep protein_coding protein_coding MGP_CBAJ_T0020562.1 MGP_CBAJ_G0015948.1 mouse_genomes_project 1 86307938 86369273 - MGP_CBAJ_P0020562 Wdfy1 protein_coding protein_coding MGP_CBAJ_T0020563.1 MGP_CBAJ_G0015948.1 mouse_genomes_project 1 86311015 86369242 - MGP_CBAJ_P0020563 Wdfy1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020564.1 MGP_CBAJ_G0015948.1 mouse_genomes_project 1 86325264 86383175 - MGP_CBAJ_P0020564 Wdfy1 protein_coding protein_coding MGP_CBAJ_T0020565.1 MGP_CBAJ_G0015948.1 mouse_genomes_project 1 86327993 86369273 - MGP_CBAJ_P0020565 Wdfy1 protein_coding protein_coding MGP_CBAJ_T0020566.1 MGP_CBAJ_G0015948.1 mouse_genomes_project 1 86328006 86369273 - MGP_CBAJ_P0020566 Wdfy1 protein_coding protein_coding MGP_CBAJ_T0020567.1 MGP_CBAJ_G0015948.1 mouse_genomes_project 1 86328195 86331694 - Wdfy1 protein_coding processed_transcript MGP_CBAJ_T0020568.1 MGP_CBAJ_G0015948.1 mouse_genomes_project 1 86336301 86369225 - Wdfy1 protein_coding retained_intron MGP_CBAJ_T0020569.1 MGP_CBAJ_G0015948.1 mouse_genomes_project 1 86336534 86369551 - MGP_CBAJ_P0020569 Wdfy1 protein_coding protein_coding MGP_CBAJ_T0011734.1 MGP_CBAJ_G0009846.1 mouse_genomes_project 1 4419847 4419877 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012145.1 MGP_CBAJ_G0010257.1 mouse_genomes_project 1 167328987 167329852 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0019290.1 MGP_CBAJ_G0015717.1 mouse_genomes_project 1 44640241 44653515 + MGP_CBAJ_P0019290 Pou3f3 protein_coding protein_coding MGP_CBAJ_T0021339.1 MGP_CBAJ_G0016121.1 mouse_genomes_project 1 117805410 117827507 + MGP_CBAJ_P0021339 Serpinb2 protein_coding protein_coding MGP_CBAJ_T0021340.1 MGP_CBAJ_G0016121.1 mouse_genomes_project 1 117805484 117827501 + MGP_CBAJ_P0021340 Serpinb2 protein_coding protein_coding MGP_CBAJ_T0021341.1 MGP_CBAJ_G0016121.1 mouse_genomes_project 1 117822515 117839558 + MGP_CBAJ_P0021341 Serpinb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021342.1 MGP_CBAJ_G0016121.1 mouse_genomes_project 1 117824229 117834466 + MGP_CBAJ_P0021342 Serpinb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012101.1 MGP_CBAJ_G0010213.1 mouse_genomes_project 1 144681749 144682005 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023284.1 MGP_CBAJ_G0016523.1 mouse_genomes_project 1 190638495 190647157 - MGP_CBAJ_P0023284 Kcnj9 protein_coding protein_coding MGP_CBAJ_T0023285.1 MGP_CBAJ_G0016523.1 mouse_genomes_project 1 190640093 190647121 - MGP_CBAJ_P0023285 Kcnj9 protein_coding protein_coding MGP_CBAJ_T0023286.1 MGP_CBAJ_G0016523.1 mouse_genomes_project 1 190643149 190645947 - Kcnj9 protein_coding retained_intron MGP_CBAJ_T0011135.1 MGP_CBAJ_G0009273.1 mouse_genomes_project 1 205040536 205040811 - Gm23780 misc_RNA misc_RNA MGP_CBAJ_T0011781.1 MGP_CBAJ_G0009893.1 mouse_genomes_project 1 17798958 17799070 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005923.1 MGP_CBAJ_G0004957.1 mouse_genomes_project 1 201663406 201674582 + lincRNA lincRNA MGP_CBAJ_T0005924.1 MGP_CBAJ_G0004957.1 mouse_genomes_project 1 201668912 201674560 + lincRNA lincRNA MGP_CBAJ_T0005925.1 MGP_CBAJ_G0004957.1 mouse_genomes_project 1 201673298 201675615 + lincRNA lincRNA MGP_CBAJ_T0018813.1 MGP_CBAJ_G0015625.1 mouse_genomes_project 1 21464032 22041469 - MGP_CBAJ_P0018813 protein_coding unknown_likely_coding MGP_CBAJ_T0018814.1 MGP_CBAJ_G0015625.1 mouse_genomes_project 1 21464316 22041469 - MGP_CBAJ_P0018814 protein_coding protein_coding MGP_CBAJ_T0018815.1 MGP_CBAJ_G0015625.1 mouse_genomes_project 1 21464316 22041469 - MGP_CBAJ_P0018815 protein_coding protein_coding MGP_CBAJ_T0018816.1 MGP_CBAJ_G0015625.1 mouse_genomes_project 1 21464316 22041469 - MGP_CBAJ_P0018816 protein_coding protein_coding MGP_CBAJ_T0018817.1 MGP_CBAJ_G0015625.1 mouse_genomes_project 1 21464316 22041469 - MGP_CBAJ_P0018817 protein_coding protein_coding MGP_CBAJ_T0018818.1 MGP_CBAJ_G0015625.1 mouse_genomes_project 1 21464316 22041469 - MGP_CBAJ_P0018818 protein_coding protein_coding MGP_CBAJ_T0018819.1 MGP_CBAJ_G0015625.1 mouse_genomes_project 1 21464980 21497488 - MGP_CBAJ_P0018819 protein_coding protein_coding MGP_CBAJ_T0018820.1 MGP_CBAJ_G0015625.1 mouse_genomes_project 1 21466490 21636592 - MGP_CBAJ_P0018820 protein_coding protein_coding MGP_CBAJ_T0018821.1 MGP_CBAJ_G0015625.1 mouse_genomes_project 1 21644403 22041469 - MGP_CBAJ_P0018821 protein_coding protein_coding MGP_CBAJ_T0002711.1 MGP_CBAJ_G0002579.1 mouse_genomes_project 1 38545140 38549630 - 4930439A04Rik antisense antisense MGP_CBAJ_T0002712.1 MGP_CBAJ_G0002579.1 mouse_genomes_project 1 38549012 38549646 - 4930439A04Rik antisense antisense MGP_CBAJ_T0020109.1 MGP_CBAJ_G0015868.1 mouse_genomes_project 1 77249142 77271622 + MGP_CBAJ_P0020109 Atic protein_coding protein_coding MGP_CBAJ_T0020110.1 MGP_CBAJ_G0015868.1 mouse_genomes_project 1 77249171 77255191 + Atic protein_coding retained_intron MGP_CBAJ_T0020111.1 MGP_CBAJ_G0015868.1 mouse_genomes_project 1 77249171 77251944 + Atic protein_coding retained_intron MGP_CBAJ_T0020112.1 MGP_CBAJ_G0015868.1 mouse_genomes_project 1 77249171 77265354 + Atic protein_coding retained_intron MGP_CBAJ_T0020113.1 MGP_CBAJ_G0015868.1 mouse_genomes_project 1 77249205 77255191 + Atic protein_coding retained_intron MGP_CBAJ_T0020114.1 MGP_CBAJ_G0015868.1 mouse_genomes_project 1 77260856 77264951 + Atic protein_coding retained_intron MGP_CBAJ_T0019341.1 MGP_CBAJ_G0015728.1 mouse_genomes_project 1 46130079 46136064 - MGP_CBAJ_P0019341 Gm8251 protein_coding protein_coding MGP_CBAJ_T0000664.1 MGP_CBAJ_G0000604.1 mouse_genomes_project 1 173524992 173527321 + TEC TEC MGP_CBAJ_T0005676.1 MGP_CBAJ_G0004759.1 mouse_genomes_project 1 68846522 68849987 + Gm26649 lincRNA lincRNA MGP_CBAJ_T0023076.1 MGP_CBAJ_G0016481.1 mouse_genomes_project 1 189294049 189319870 - MGP_CBAJ_P0023076 Sdhc protein_coding protein_coding MGP_CBAJ_T0023077.1 MGP_CBAJ_G0016481.1 mouse_genomes_project 1 189296283 189319858 - MGP_CBAJ_P0023077 Sdhc protein_coding protein_coding MGP_CBAJ_T0023078.1 MGP_CBAJ_G0016481.1 mouse_genomes_project 1 189308069 189319855 - MGP_CBAJ_P0023078 Sdhc protein_coding protein_coding MGP_CBAJ_T0012224.1 MGP_CBAJ_G0010336.1 mouse_genomes_project 1 211884383 211884809 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002802.1 MGP_CBAJ_G0002647.1 mouse_genomes_project 1 130144668 130145280 - 2900060B14Rik antisense antisense MGP_CBAJ_T0002803.1 MGP_CBAJ_G0002647.1 mouse_genomes_project 1 130144682 130144760 - 2900060B14Rik antisense antisense MGP_CBAJ_T0019991.1 MGP_CBAJ_G0015845.1 mouse_genomes_project 1 69997328 69999493 - MGP_CBAJ_P0019991 Crygc protein_coding protein_coding MGP_CBAJ_T0019992.1 MGP_CBAJ_G0015845.1 mouse_genomes_project 1 69997334 69999325 - MGP_CBAJ_P0019992 Crygc protein_coding protein_coding MGP_CBAJ_T0005788.1 MGP_CBAJ_G0004849.1 mouse_genomes_project 1 131100492 131109833 + Gm29455 lincRNA lincRNA MGP_CBAJ_T0005789.1 MGP_CBAJ_G0004849.1 mouse_genomes_project 1 131100534 131169935 + Gm29455 lincRNA lincRNA MGP_CBAJ_T0021580.1 MGP_CBAJ_G0016169.1 mouse_genomes_project 1 141014906 141032018 + MGP_CBAJ_P0021580 Ubxn4 protein_coding protein_coding MGP_CBAJ_T0021581.1 MGP_CBAJ_G0016169.1 mouse_genomes_project 1 141015104 141054009 + MGP_CBAJ_P0021581 Ubxn4 protein_coding protein_coding MGP_CBAJ_T0021582.1 MGP_CBAJ_G0016169.1 mouse_genomes_project 1 141031986 141047797 + Ubxn4 protein_coding retained_intron MGP_CBAJ_T0021583.1 MGP_CBAJ_G0016169.1 mouse_genomes_project 1 141049257 141051651 + Ubxn4 protein_coding retained_intron MGP_CBAJ_T0101506.1 MGP_CBAJ_G0039538.1 mouse_genomes_project 1 196994049 197203904 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0000623.1 MGP_CBAJ_G0000563.1 mouse_genomes_project 1 152681558 152683962 - TEC TEC MGP_CBAJ_T0011950.1 MGP_CBAJ_G0010062.1 mouse_genomes_project 1 70477246 70477651 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011868.1 MGP_CBAJ_G0009980.1 mouse_genomes_project 1 47754528 47755501 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101444.1 MGP_CBAJ_G0039476.1 mouse_genomes_project 1 20377036 20380812 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0023785.1 MGP_CBAJ_G0016654.1 mouse_genomes_project 1 207027087 207128372 - MGP_CBAJ_P0023785 Tgfb2 protein_coding protein_coding MGP_CBAJ_T0023786.1 MGP_CBAJ_G0016654.1 mouse_genomes_project 1 207028514 207128083 - MGP_CBAJ_P0023786 Tgfb2 protein_coding protein_coding MGP_CBAJ_T0023787.1 MGP_CBAJ_G0016654.1 mouse_genomes_project 1 207029875 207056016 - Tgfb2 protein_coding retained_intron MGP_CBAJ_T0023788.1 MGP_CBAJ_G0016654.1 mouse_genomes_project 1 207032997 207056082 - Tgfb2 protein_coding retained_intron MGP_CBAJ_T0023789.1 MGP_CBAJ_G0016654.1 mouse_genomes_project 1 207036872 207078760 - Tgfb2 protein_coding processed_transcript MGP_CBAJ_T0023790.1 MGP_CBAJ_G0016654.1 mouse_genomes_project 1 207106261 207126716 - Tgfb2 protein_coding processed_transcript MGP_CBAJ_T0021700.1 MGP_CBAJ_G0016201.1 mouse_genomes_project 1 145083855 145086637 + Slc41a1 protein_coding processed_transcript MGP_CBAJ_T0021701.1 MGP_CBAJ_G0016201.1 mouse_genomes_project 1 145084339 145105215 + MGP_CBAJ_P0021701 Slc41a1 protein_coding protein_coding MGP_CBAJ_T0021702.1 MGP_CBAJ_G0016201.1 mouse_genomes_project 1 145099189 145102979 + Slc41a1 protein_coding retained_intron MGP_CBAJ_T0021023.1 MGP_CBAJ_G0016050.1 mouse_genomes_project 1 99563228 99587770 - MGP_CBAJ_P0021023 Ilkap protein_coding nonsense_mediated_decay MGP_CBAJ_T0021024.1 MGP_CBAJ_G0016050.1 mouse_genomes_project 1 99563232 99573698 - MGP_CBAJ_P0021024 Ilkap protein_coding protein_coding MGP_CBAJ_T0021025.1 MGP_CBAJ_G0016050.1 mouse_genomes_project 1 99565197 99587853 - MGP_CBAJ_P0021025 Ilkap protein_coding protein_coding MGP_CBAJ_T0021026.1 MGP_CBAJ_G0016050.1 mouse_genomes_project 1 99565198 99587825 - Ilkap protein_coding retained_intron MGP_CBAJ_T0021027.1 MGP_CBAJ_G0016050.1 mouse_genomes_project 1 99565325 99573645 - MGP_CBAJ_P0021027 Ilkap protein_coding protein_coding MGP_CBAJ_T0021028.1 MGP_CBAJ_G0016050.1 mouse_genomes_project 1 99565377 99568265 - Ilkap protein_coding retained_intron MGP_CBAJ_T0021029.1 MGP_CBAJ_G0016050.1 mouse_genomes_project 1 99565420 99587863 - MGP_CBAJ_P0021029 Ilkap protein_coding protein_coding MGP_CBAJ_T0021030.1 MGP_CBAJ_G0016050.1 mouse_genomes_project 1 99565421 99587871 - MGP_CBAJ_P0021030 Ilkap protein_coding nonsense_mediated_decay MGP_CBAJ_T0021031.1 MGP_CBAJ_G0016050.1 mouse_genomes_project 1 99570111 99587885 - Ilkap protein_coding processed_transcript MGP_CBAJ_T0021032.1 MGP_CBAJ_G0016050.1 mouse_genomes_project 1 99573696 99587855 - MGP_CBAJ_P0021032 Ilkap protein_coding nonsense_mediated_decay MGP_CBAJ_T0021033.1 MGP_CBAJ_G0016050.1 mouse_genomes_project 1 99574326 99577876 - Ilkap protein_coding retained_intron MGP_CBAJ_T0021034.1 MGP_CBAJ_G0016050.1 mouse_genomes_project 1 99574415 99587848 - MGP_CBAJ_P0021034 Ilkap protein_coding protein_coding MGP_CBAJ_T0021035.1 MGP_CBAJ_G0016050.1 mouse_genomes_project 1 99579303 99587864 - Ilkap protein_coding retained_intron MGP_CBAJ_T0005866.1 MGP_CBAJ_G0004911.1 mouse_genomes_project 1 173439660 173535533 - Gm28694 lincRNA lincRNA MGP_CBAJ_T0000735.1 MGP_CBAJ_G0000674.1 mouse_genomes_project 1 201840697 201843941 - TEC TEC MGP_CBAJ_T0019135.1 MGP_CBAJ_G0015683.1 mouse_genomes_project 1 38856598 38870020 - MGP_CBAJ_P0019135 2010300C02Rik protein_coding protein_coding MGP_CBAJ_T0019136.1 MGP_CBAJ_G0015683.1 mouse_genomes_project 1 38856598 38976729 - MGP_CBAJ_P0019136 2010300C02Rik protein_coding protein_coding MGP_CBAJ_T0019137.1 MGP_CBAJ_G0015683.1 mouse_genomes_project 1 38887860 38976439 - MGP_CBAJ_P0019137 2010300C02Rik protein_coding protein_coding MGP_CBAJ_T0011882.1 MGP_CBAJ_G0009994.1 mouse_genomes_project 1 51495001 51495932 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011810.1 MGP_CBAJ_G0009922.1 mouse_genomes_project 1 28841655 28844140 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0021608.1 MGP_CBAJ_G0016177.1 mouse_genomes_project 1 143794170 143826035 - MGP_CBAJ_P0021608 C4bp protein_coding protein_coding MGP_CBAJ_T0021609.1 MGP_CBAJ_G0016177.1 mouse_genomes_project 1 143796212 143807779 - MGP_CBAJ_P0021609 C4bp protein_coding protein_coding MGP_CBAJ_T0021610.1 MGP_CBAJ_G0016177.1 mouse_genomes_project 1 143802428 143826013 - MGP_CBAJ_P0021610 C4bp protein_coding protein_coding MGP_CBAJ_T0021611.1 MGP_CBAJ_G0016177.1 mouse_genomes_project 1 143822170 143826027 - C4bp protein_coding retained_intron MGP_CBAJ_T0000743.1 MGP_CBAJ_G0000681.1 mouse_genomes_project 1 202940909 202946499 + TEC TEC MGP_CBAJ_T0000648.1 MGP_CBAJ_G0000588.1 mouse_genomes_project 1 168205004 168205353 - TEC TEC MGP_CBAJ_T0012091.1 MGP_CBAJ_G0010203.1 mouse_genomes_project 1 136114727 136115609 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098594.1 MGP_CBAJ_G0036849.1 mouse_genomes_project 1 201673447 201673541 - Gm23690 snRNA snRNA MGP_CBAJ_T0018574.1 MGP_CBAJ_G0015576.1 mouse_genomes_project 1 7729310 7784669 - MGP_CBAJ_P0018574 Ppp1r42 protein_coding protein_coding MGP_CBAJ_T0018575.1 MGP_CBAJ_G0015576.1 mouse_genomes_project 1 7729310 7750091 - MGP_CBAJ_P0018575 Ppp1r42 protein_coding protein_coding MGP_CBAJ_T0018576.1 MGP_CBAJ_G0015576.1 mouse_genomes_project 1 7729310 7775366 - MGP_CBAJ_P0018576 Ppp1r42 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018577.1 MGP_CBAJ_G0015576.1 mouse_genomes_project 1 7729509 7784663 - MGP_CBAJ_P0018577 Ppp1r42 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018578.1 MGP_CBAJ_G0015576.1 mouse_genomes_project 1 7739495 7784663 - MGP_CBAJ_P0018578 Ppp1r42 protein_coding protein_coding MGP_CBAJ_T0018579.1 MGP_CBAJ_G0015576.1 mouse_genomes_project 1 7759450 7784663 - Ppp1r42 protein_coding retained_intron MGP_CBAJ_T0023692.1 MGP_CBAJ_G0016632.1 mouse_genomes_project 1 202754294 202756349 - MGP_CBAJ_P0023692 Ccdc185 protein_coding protein_coding MGP_CBAJ_T0018448.1 MGP_CBAJ_G0015554.1 mouse_genomes_project 1 1495910 1626146 - MGP_CBAJ_P0018448 protein_coding protein_coding MGP_CBAJ_T0018449.1 MGP_CBAJ_G0015554.1 mouse_genomes_project 1 1554944 1571196 - MGP_CBAJ_P0018449 protein_coding protein_coding MGP_CBAJ_T0002816.1 MGP_CBAJ_G0002657.1 mouse_genomes_project 1 144498596 144502044 + Gm28913 antisense antisense MGP_CBAJ_T0022903.1 MGP_CBAJ_G0016439.1 mouse_genomes_project 1 183341603 183438967 + MGP_CBAJ_P0022903 Cd247 protein_coding protein_coding MGP_CBAJ_T0022904.1 MGP_CBAJ_G0016439.1 mouse_genomes_project 1 183341603 183438967 + MGP_CBAJ_P0022904 Cd247 protein_coding protein_coding MGP_CBAJ_T0022905.1 MGP_CBAJ_G0016439.1 mouse_genomes_project 1 183341603 183438967 + MGP_CBAJ_P0022905 Cd247 protein_coding protein_coding MGP_CBAJ_T0022906.1 MGP_CBAJ_G0016439.1 mouse_genomes_project 1 183341611 183430637 + MGP_CBAJ_P0022906 Cd247 protein_coding protein_coding MGP_CBAJ_T0022907.1 MGP_CBAJ_G0016439.1 mouse_genomes_project 1 183341645 183435250 + MGP_CBAJ_P0022907 Cd247 protein_coding protein_coding MGP_CBAJ_T0022908.1 MGP_CBAJ_G0016439.1 mouse_genomes_project 1 183341687 183436908 + MGP_CBAJ_P0022908 Cd247 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022909.1 MGP_CBAJ_G0016439.1 mouse_genomes_project 1 183341687 183438063 + MGP_CBAJ_P0022909 Cd247 protein_coding protein_coding MGP_CBAJ_T0022910.1 MGP_CBAJ_G0016439.1 mouse_genomes_project 1 183426787 183430126 + Cd247 protein_coding retained_intron MGP_CBAJ_T0022911.1 MGP_CBAJ_G0016439.1 mouse_genomes_project 1 183432468 183445091 + Cd247 protein_coding processed_transcript MGP_CBAJ_T0023794.1 MGP_CBAJ_G0016657.1 mouse_genomes_project 1 207497338 207674427 - MGP_CBAJ_P0023794 Spata17 protein_coding protein_coding MGP_CBAJ_T0023795.1 MGP_CBAJ_G0016657.1 mouse_genomes_project 1 207501105 207674408 - MGP_CBAJ_P0023795 Spata17 protein_coding protein_coding MGP_CBAJ_T0023796.1 MGP_CBAJ_G0016657.1 mouse_genomes_project 1 207559008 207596731 - MGP_CBAJ_P0023796 Spata17 protein_coding protein_coding MGP_CBAJ_T0023797.1 MGP_CBAJ_G0016657.1 mouse_genomes_project 1 207563809 207674399 - MGP_CBAJ_P0023797 Spata17 protein_coding protein_coding MGP_CBAJ_T0023798.1 MGP_CBAJ_G0016657.1 mouse_genomes_project 1 207587339 207596924 - MGP_CBAJ_P0023798 Spata17 protein_coding protein_coding MGP_CBAJ_T0023799.1 MGP_CBAJ_G0016657.1 mouse_genomes_project 1 207587339 207674383 - MGP_CBAJ_P0023799 Spata17 protein_coding protein_coding MGP_CBAJ_T0023800.1 MGP_CBAJ_G0016657.1 mouse_genomes_project 1 207587346 207596911 - Spata17 protein_coding processed_transcript MGP_CBAJ_T0023801.1 MGP_CBAJ_G0016657.1 mouse_genomes_project 1 207645837 207674408 - Spata17 protein_coding processed_transcript MGP_CBAJ_T0000395.1 MGP_CBAJ_G0000338.1 mouse_genomes_project 1 33061213 33062758 + TEC TEC MGP_CBAJ_T0019953.1 MGP_CBAJ_G0015836.1 mouse_genomes_project 1 68846506 68945389 - MGP_CBAJ_P0019953 Klf7 protein_coding protein_coding MGP_CBAJ_T0019954.1 MGP_CBAJ_G0015836.1 mouse_genomes_project 1 68858849 68945380 - MGP_CBAJ_P0019954 Klf7 protein_coding protein_coding MGP_CBAJ_T0019955.1 MGP_CBAJ_G0015836.1 mouse_genomes_project 1 68896111 68949006 - MGP_CBAJ_P0019955 Klf7 protein_coding protein_coding MGP_CBAJ_T0022984.1 MGP_CBAJ_G0016458.1 mouse_genomes_project 1 185923012 186263422 - MGP_CBAJ_P0022984 Pbx1 protein_coding protein_coding MGP_CBAJ_T0022985.1 MGP_CBAJ_G0016458.1 mouse_genomes_project 1 185965432 186261274 - MGP_CBAJ_P0022985 Pbx1 protein_coding protein_coding MGP_CBAJ_T0022986.1 MGP_CBAJ_G0016458.1 mouse_genomes_project 1 185970190 186261127 - MGP_CBAJ_P0022986 Pbx1 protein_coding protein_coding MGP_CBAJ_T0022987.1 MGP_CBAJ_G0016458.1 mouse_genomes_project 1 185970230 185976511 - Pbx1 protein_coding processed_transcript MGP_CBAJ_T0022988.1 MGP_CBAJ_G0016458.1 mouse_genomes_project 1 185970592 186260747 - MGP_CBAJ_P0022988 Pbx1 protein_coding protein_coding MGP_CBAJ_T0022989.1 MGP_CBAJ_G0016458.1 mouse_genomes_project 1 185995405 186261363 - MGP_CBAJ_P0022989 Pbx1 protein_coding protein_coding MGP_CBAJ_T0022990.1 MGP_CBAJ_G0016458.1 mouse_genomes_project 1 186020177 186260903 - Pbx1 protein_coding retained_intron MGP_CBAJ_T0022991.1 MGP_CBAJ_G0016458.1 mouse_genomes_project 1 186253684 186261363 - Pbx1 protein_coding retained_intron MGP_CBAJ_T0016721.1 MGP_CBAJ_G0014828.1 mouse_genomes_project 1 34970049 34984537 - Gm26788 processed_transcript antisense MGP_CBAJ_T0016722.1 MGP_CBAJ_G0014828.1 mouse_genomes_project 1 34981296 34984712 - Gm26788 processed_transcript retained_intron MGP_CBAJ_T0000717.1 MGP_CBAJ_G0000657.1 mouse_genomes_project 1 196106685 196108582 - TEC TEC MGP_CBAJ_T0005926.1 MGP_CBAJ_G0004958.1 mouse_genomes_project 1 201730687 201732303 - Gm5533 lincRNA lincRNA MGP_CBAJ_T0002686.1 MGP_CBAJ_G0002560.1 mouse_genomes_project 1 11514617 11524989 + Gm29570 antisense antisense MGP_CBAJ_T0023572.1 MGP_CBAJ_G0016605.1 mouse_genomes_project 1 200054247 200113967 - MGP_CBAJ_P0023572 Stum protein_coding protein_coding MGP_CBAJ_T0023573.1 MGP_CBAJ_G0016605.1 mouse_genomes_project 1 200065928 200114004 - MGP_CBAJ_P0023573 Stum protein_coding protein_coding MGP_CBAJ_T0012084.1 MGP_CBAJ_G0010196.1 mouse_genomes_project 1 134327979 134328814 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000334.1 MGP_CBAJ_G0000279.1 mouse_genomes_project 1 4659501 4663531 + TEC TEC MGP_CBAJ_T0000658.1 MGP_CBAJ_G0000598.1 mouse_genomes_project 1 172622801 172623438 - TEC TEC MGP_CBAJ_T0019028.1 MGP_CBAJ_G0015665.1 mouse_genomes_project 1 37439370 37490714 + MGP_CBAJ_P0019028 Fer1l5 protein_coding protein_coding MGP_CBAJ_T0019029.1 MGP_CBAJ_G0015665.1 mouse_genomes_project 1 37452552 37471627 + MGP_CBAJ_P0019029 Fer1l5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019030.1 MGP_CBAJ_G0015665.1 mouse_genomes_project 1 37485494 37490717 + MGP_CBAJ_P0019030 Fer1l5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0005790.1 MGP_CBAJ_G0004850.1 mouse_genomes_project 1 131340337 131347023 - 3830432H09Rik lincRNA lincRNA MGP_CBAJ_T0005791.1 MGP_CBAJ_G0004850.1 mouse_genomes_project 1 131341150 131346103 - 3830432H09Rik lincRNA lincRNA MGP_CBAJ_T0002785.1 MGP_CBAJ_G0002635.1 mouse_genomes_project 1 100903331 100903707 - 1700054K02Rik antisense antisense MGP_CBAJ_T0021109.1 MGP_CBAJ_G0016070.1 mouse_genomes_project 1 101308541 101330209 + MGP_CBAJ_P0021109 Capn10 protein_coding protein_coding MGP_CBAJ_T0021110.1 MGP_CBAJ_G0016070.1 mouse_genomes_project 1 101308931 101320275 + MGP_CBAJ_P0021110 Capn10 protein_coding protein_coding MGP_CBAJ_T0021111.1 MGP_CBAJ_G0016070.1 mouse_genomes_project 1 101308998 101330197 + MGP_CBAJ_P0021111 Capn10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021112.1 MGP_CBAJ_G0016070.1 mouse_genomes_project 1 101319761 101327371 + MGP_CBAJ_P0021112 Capn10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021113.1 MGP_CBAJ_G0016070.1 mouse_genomes_project 1 101324971 101326012 + Capn10 protein_coding retained_intron MGP_CBAJ_T0021114.1 MGP_CBAJ_G0016070.1 mouse_genomes_project 1 101328820 101329223 + Capn10 protein_coding processed_transcript MGP_CBAJ_T0021115.1 MGP_CBAJ_G0016070.1 mouse_genomes_project 1 101329152 101329858 + Capn10 protein_coding retained_intron MGP_CBAJ_T0005954.1 MGP_CBAJ_G0004978.1 mouse_genomes_project 1 206899544 206951552 - A730004F24Rik lincRNA lincRNA MGP_CBAJ_T0005955.1 MGP_CBAJ_G0004978.1 mouse_genomes_project 1 206899588 206951761 - A730004F24Rik lincRNA lincRNA MGP_CBAJ_T0000437.1 MGP_CBAJ_G0000379.1 mouse_genomes_project 1 57628688 57631304 - TEC TEC MGP_CBAJ_T0022119.1 MGP_CBAJ_G0016290.1 mouse_genomes_project 1 152978264 152995469 - MGP_CBAJ_P0022119 Lhx9 protein_coding protein_coding MGP_CBAJ_T0022120.1 MGP_CBAJ_G0016290.1 mouse_genomes_project 1 152978264 153004337 - MGP_CBAJ_P0022120 Lhx9 protein_coding protein_coding MGP_CBAJ_T0022121.1 MGP_CBAJ_G0016290.1 mouse_genomes_project 1 152978264 153005255 - MGP_CBAJ_P0022121 Lhx9 protein_coding protein_coding MGP_CBAJ_T0022122.1 MGP_CBAJ_G0016290.1 mouse_genomes_project 1 152982213 153004425 - MGP_CBAJ_P0022122 Lhx9 protein_coding protein_coding MGP_CBAJ_T0022123.1 MGP_CBAJ_G0016290.1 mouse_genomes_project 1 152984003 152995441 - MGP_CBAJ_P0022123 Lhx9 protein_coding protein_coding MGP_CBAJ_T0022124.1 MGP_CBAJ_G0016290.1 mouse_genomes_project 1 152984773 152986708 - Lhx9 protein_coding retained_intron MGP_CBAJ_T0022125.1 MGP_CBAJ_G0016290.1 mouse_genomes_project 1 152985909 152995466 - MGP_CBAJ_P0022125 Lhx9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0002722.1 MGP_CBAJ_G0002587.1 mouse_genomes_project 1 41160726 41168649 + D930019O06Rik antisense antisense MGP_CBAJ_T0020961.1 MGP_CBAJ_G0016038.1 mouse_genomes_project 1 98903865 98984228 - MGP_CBAJ_P0020961 Col6a3 protein_coding protein_coding MGP_CBAJ_T0020962.1 MGP_CBAJ_G0016038.1 mouse_genomes_project 1 98903865 98984228 - MGP_CBAJ_P0020962 Col6a3 protein_coding protein_coding MGP_CBAJ_T0020963.1 MGP_CBAJ_G0016038.1 mouse_genomes_project 1 98904795 98984209 - MGP_CBAJ_P0020963 Col6a3 protein_coding protein_coding MGP_CBAJ_T0020964.1 MGP_CBAJ_G0016038.1 mouse_genomes_project 1 98905324 98911270 - Col6a3 protein_coding retained_intron MGP_CBAJ_T0020965.1 MGP_CBAJ_G0016038.1 mouse_genomes_project 1 98931910 98948377 - Col6a3 protein_coding retained_intron MGP_CBAJ_T0020966.1 MGP_CBAJ_G0016038.1 mouse_genomes_project 1 98934361 98935191 - Col6a3 protein_coding retained_intron MGP_CBAJ_T0020967.1 MGP_CBAJ_G0016038.1 mouse_genomes_project 1 98942922 98984185 - MGP_CBAJ_P0020967 Col6a3 protein_coding protein_coding MGP_CBAJ_T0020968.1 MGP_CBAJ_G0016038.1 mouse_genomes_project 1 98962580 98984228 - MGP_CBAJ_P0020968 Col6a3 protein_coding protein_coding MGP_CBAJ_T0012130.1 MGP_CBAJ_G0010242.1 mouse_genomes_project 1 160270516 160270909 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0021141.1 MGP_CBAJ_G0016077.1 mouse_genomes_project 1 101645893 101722235 + MGP_CBAJ_P0021141 Sned1 protein_coding protein_coding MGP_CBAJ_T0021142.1 MGP_CBAJ_G0016077.1 mouse_genomes_project 1 101645903 101703638 + Sned1 protein_coding retained_intron MGP_CBAJ_T0021143.1 MGP_CBAJ_G0016077.1 mouse_genomes_project 1 101690978 101701447 + Sned1 protein_coding processed_transcript MGP_CBAJ_T0021144.1 MGP_CBAJ_G0016077.1 mouse_genomes_project 1 101700366 101716960 + MGP_CBAJ_P0021144 Sned1 protein_coding protein_coding MGP_CBAJ_T0021145.1 MGP_CBAJ_G0016077.1 mouse_genomes_project 1 101705973 101717649 + Sned1 protein_coding retained_intron MGP_CBAJ_T0021146.1 MGP_CBAJ_G0016077.1 mouse_genomes_project 1 101716867 101717771 + Sned1 protein_coding retained_intron MGP_CBAJ_T0018446.1 MGP_CBAJ_G0015552.1 mouse_genomes_project 1 623431 626686 + MGP_CBAJ_P0018446 protein_coding protein_coding MGP_CBAJ_T0023038.1 MGP_CBAJ_G0016471.1 mouse_genomes_project 1 188697561 188736018 + MGP_CBAJ_P0023038 Olfml2b protein_coding protein_coding MGP_CBAJ_T0023236.1 MGP_CBAJ_G0016515.1 mouse_genomes_project 1 190373515 190420207 + MGP_CBAJ_P0023236 Copa protein_coding protein_coding MGP_CBAJ_T0023237.1 MGP_CBAJ_G0016515.1 mouse_genomes_project 1 190373629 190386955 + Copa protein_coding retained_intron MGP_CBAJ_T0023238.1 MGP_CBAJ_G0016515.1 mouse_genomes_project 1 190373791 190404466 + MGP_CBAJ_P0023238 Copa protein_coding nonsense_mediated_decay MGP_CBAJ_T0023239.1 MGP_CBAJ_G0016515.1 mouse_genomes_project 1 190373817 190398375 + Copa protein_coding retained_intron MGP_CBAJ_T0023240.1 MGP_CBAJ_G0016515.1 mouse_genomes_project 1 190373818 190420212 + MGP_CBAJ_P0023240 Copa protein_coding protein_coding MGP_CBAJ_T0023241.1 MGP_CBAJ_G0016515.1 mouse_genomes_project 1 190388644 190394667 + Copa protein_coding processed_transcript MGP_CBAJ_T0023242.1 MGP_CBAJ_G0016515.1 mouse_genomes_project 1 190393138 190399906 + MGP_CBAJ_P0023242 Copa protein_coding nonsense_mediated_decay MGP_CBAJ_T0023243.1 MGP_CBAJ_G0016515.1 mouse_genomes_project 1 190405706 190409085 + Copa protein_coding retained_intron MGP_CBAJ_T0023244.1 MGP_CBAJ_G0016515.1 mouse_genomes_project 1 190407853 190420210 + Copa protein_coding retained_intron MGP_CBAJ_T0023245.1 MGP_CBAJ_G0016515.1 mouse_genomes_project 1 190416016 190417255 + Copa protein_coding retained_intron MGP_CBAJ_T0101463.1 MGP_CBAJ_G0039495.1 mouse_genomes_project 1 95913591 95913805 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0022486.1 MGP_CBAJ_G0016360.1 mouse_genomes_project 1 172367523 172410356 + MGP_CBAJ_P0022486 Tor1aip2 protein_coding protein_coding MGP_CBAJ_T0022487.1 MGP_CBAJ_G0016360.1 mouse_genomes_project 1 172367846 172392730 + MGP_CBAJ_P0022487 Tor1aip2 protein_coding protein_coding MGP_CBAJ_T0022488.1 MGP_CBAJ_G0016360.1 mouse_genomes_project 1 172367892 172398715 + MGP_CBAJ_P0022488 Tor1aip2 protein_coding protein_coding MGP_CBAJ_T0022489.1 MGP_CBAJ_G0016360.1 mouse_genomes_project 1 172368253 172392937 + MGP_CBAJ_P0022489 Tor1aip2 protein_coding protein_coding MGP_CBAJ_T0022490.1 MGP_CBAJ_G0016360.1 mouse_genomes_project 1 172372994 172390102 + Tor1aip2 protein_coding processed_transcript MGP_CBAJ_T0022491.1 MGP_CBAJ_G0016360.1 mouse_genomes_project 1 172372994 172410356 + MGP_CBAJ_P0022491 Tor1aip2 protein_coding protein_coding MGP_CBAJ_T0022492.1 MGP_CBAJ_G0016360.1 mouse_genomes_project 1 172373021 172392937 + MGP_CBAJ_P0022492 Tor1aip2 protein_coding protein_coding MGP_CBAJ_T0022493.1 MGP_CBAJ_G0016360.1 mouse_genomes_project 1 172373021 172392937 + MGP_CBAJ_P0022493 Tor1aip2 protein_coding protein_coding MGP_CBAJ_T0022494.1 MGP_CBAJ_G0016360.1 mouse_genomes_project 1 172402513 172406349 + Tor1aip2 protein_coding retained_intron MGP_CBAJ_T0018929.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 34680924 35119901 + MGP_CBAJ_P0018929 Dst protein_coding protein_coding MGP_CBAJ_T0018930.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 34680971 35121002 + MGP_CBAJ_P0018930 Dst protein_coding unknown_likely_coding MGP_CBAJ_T0018931.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 34784277 34981061 + MGP_CBAJ_P0018931 Dst protein_coding protein_coding MGP_CBAJ_T0018932.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 34784279 34939120 + MGP_CBAJ_P0018932 Dst protein_coding protein_coding MGP_CBAJ_T0018933.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 34784523 34939121 + MGP_CBAJ_P0018933 Dst protein_coding protein_coding MGP_CBAJ_T0018934.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 34784577 34966373 + Dst protein_coding retained_intron MGP_CBAJ_T0018935.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 34790196 35121058 + MGP_CBAJ_P0018935 Dst protein_coding protein_coding MGP_CBAJ_T0018936.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 34790196 35121069 + MGP_CBAJ_P0018936 Dst protein_coding protein_coding MGP_CBAJ_T0018937.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 34790209 35121060 + MGP_CBAJ_P0018937 Dst protein_coding protein_coding MGP_CBAJ_T0018938.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 34883541 34919321 + Dst protein_coding retained_intron MGP_CBAJ_T0018939.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 34921579 34956196 + Dst protein_coding processed_transcript MGP_CBAJ_T0018940.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 34961927 35120747 + MGP_CBAJ_P0018940 Dst protein_coding protein_coding MGP_CBAJ_T0018941.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 34962002 34990170 + MGP_CBAJ_P0018941 Dst protein_coding protein_coding MGP_CBAJ_T0018942.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 34962002 34999514 + MGP_CBAJ_P0018942 Dst protein_coding protein_coding MGP_CBAJ_T0018943.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 34963596 34967074 + Dst protein_coding retained_intron MGP_CBAJ_T0018944.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 34985171 34989513 + Dst protein_coding retained_intron MGP_CBAJ_T0018945.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 35067660 35120747 + MGP_CBAJ_P0018945 Dst protein_coding protein_coding MGP_CBAJ_T0018946.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 35080446 35082169 + Dst protein_coding retained_intron MGP_CBAJ_T0018947.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 35105749 35115772 + MGP_CBAJ_P0018947 Dst protein_coding protein_coding MGP_CBAJ_T0018948.1 MGP_CBAJ_G0015649.1 mouse_genomes_project 1 35106740 35118960 + MGP_CBAJ_P0018948 Dst protein_coding protein_coding MGP_CBAJ_T0000409.1 MGP_CBAJ_G0000351.1 mouse_genomes_project 1 35705572 35708604 + TEC TEC MGP_CBAJ_T0000375.1 MGP_CBAJ_G0000318.1 mouse_genomes_project 1 24867766 24871198 - TEC TEC MGP_CBAJ_T0021669.1 MGP_CBAJ_G0016194.1 mouse_genomes_project 1 144524549 144771916 - MGP_CBAJ_P0021669 Srgap2 protein_coding protein_coding MGP_CBAJ_T0021670.1 MGP_CBAJ_G0016194.1 mouse_genomes_project 1 144528656 144539756 - MGP_CBAJ_P0021670 Srgap2 protein_coding protein_coding MGP_CBAJ_T0021671.1 MGP_CBAJ_G0016194.1 mouse_genomes_project 1 144534290 144566975 - Srgap2 protein_coding processed_transcript MGP_CBAJ_T0021672.1 MGP_CBAJ_G0016194.1 mouse_genomes_project 1 144534520 144771916 - MGP_CBAJ_P0021672 Srgap2 protein_coding protein_coding MGP_CBAJ_T0021673.1 MGP_CBAJ_G0016194.1 mouse_genomes_project 1 144534521 144543517 - Srgap2 protein_coding processed_transcript MGP_CBAJ_T0021674.1 MGP_CBAJ_G0016194.1 mouse_genomes_project 1 144534523 144578448 - MGP_CBAJ_P0021674 Srgap2 protein_coding protein_coding MGP_CBAJ_T0021675.1 MGP_CBAJ_G0016194.1 mouse_genomes_project 1 144535058 144535683 - Srgap2 protein_coding processed_transcript MGP_CBAJ_T0021676.1 MGP_CBAJ_G0016194.1 mouse_genomes_project 1 144535943 144600134 - MGP_CBAJ_P0021676 Srgap2 protein_coding protein_coding MGP_CBAJ_T0021677.1 MGP_CBAJ_G0016194.1 mouse_genomes_project 1 144551917 144566168 - Srgap2 protein_coding retained_intron MGP_CBAJ_T0021678.1 MGP_CBAJ_G0016194.1 mouse_genomes_project 1 144598095 144771921 - Srgap2 protein_coding retained_intron MGP_CBAJ_T0021679.1 MGP_CBAJ_G0016194.1 mouse_genomes_project 1 144641316 144758786 - MGP_CBAJ_P0021679 Srgap2 protein_coding protein_coding MGP_CBAJ_T0021680.1 MGP_CBAJ_G0016194.1 mouse_genomes_project 1 144670672 144739586 - MGP_CBAJ_P0021680 Srgap2 protein_coding protein_coding MGP_CBAJ_T0018804.1 MGP_CBAJ_G0015623.1 mouse_genomes_project 1 20398518 20412108 + MGP_CBAJ_P0018804 protein_coding protein_coding MGP_CBAJ_T0009443.1 MGP_CBAJ_G0007581.1 mouse_genomes_project 1 205564192 205564259 + Mir194-1 miRNA miRNA MGP_CBAJ_T0023029.1 MGP_CBAJ_G0016469.1 mouse_genomes_project 1 188306840 188333968 - Nos1ap protein_coding processed_transcript MGP_CBAJ_T0023031.1 MGP_CBAJ_G0016469.1 mouse_genomes_project 1 188323658 188630665 - MGP_CBAJ_P0023031 Nos1ap protein_coding protein_coding MGP_CBAJ_T0023032.1 MGP_CBAJ_G0016469.1 mouse_genomes_project 1 188323698 188327094 - Nos1ap protein_coding retained_intron MGP_CBAJ_T0023033.1 MGP_CBAJ_G0016469.1 mouse_genomes_project 1 188324920 188330669 - Nos1ap protein_coding processed_transcript MGP_CBAJ_T0023034.1 MGP_CBAJ_G0016469.1 mouse_genomes_project 1 188333780 188630168 - MGP_CBAJ_P0023034 Nos1ap protein_coding protein_coding MGP_CBAJ_T0023035.1 MGP_CBAJ_G0016469.1 mouse_genomes_project 1 188333926 188630101 - MGP_CBAJ_P0023035 Nos1ap protein_coding protein_coding MGP_CBAJ_T0023036.1 MGP_CBAJ_G0016469.1 mouse_genomes_project 1 188344667 188470133 - Nos1ap protein_coding processed_transcript MGP_CBAJ_T0023037.1 MGP_CBAJ_G0016469.1 mouse_genomes_project 1 188381914 188630653 - Nos1ap protein_coding retained_intron MGP_CBAJ_T0020703.1 MGP_CBAJ_G0015977.1 mouse_genomes_project 1 93129848 93188234 + MGP_CBAJ_P0020703 Cab39 protein_coding protein_coding MGP_CBAJ_T0020704.1 MGP_CBAJ_G0015977.1 mouse_genomes_project 1 93129948 93155014 + MGP_CBAJ_P0020704 Cab39 protein_coding protein_coding MGP_CBAJ_T0020705.1 MGP_CBAJ_G0015977.1 mouse_genomes_project 1 93130875 93173976 + MGP_CBAJ_P0020705 Cab39 protein_coding protein_coding MGP_CBAJ_T0020706.1 MGP_CBAJ_G0015977.1 mouse_genomes_project 1 93130918 93187023 + MGP_CBAJ_P0020706 Cab39 protein_coding protein_coding MGP_CBAJ_T0020707.1 MGP_CBAJ_G0015977.1 mouse_genomes_project 1 93179737 93182728 + Cab39 protein_coding retained_intron MGP_CBAJ_T0002888.1 MGP_CBAJ_G0002714.1 mouse_genomes_project 1 190641003 190641671 + Gm36937 antisense antisense MGP_CBAJ_T0000358.1 MGP_CBAJ_G0000303.1 mouse_genomes_project 1 13672603 13674136 + TEC TEC MGP_CBAJ_T0020104.1 MGP_CBAJ_G0015867.1 mouse_genomes_project 1 76900669 77083389 - MGP_CBAJ_P0020104 Abca12 protein_coding protein_coding MGP_CBAJ_T0020105.1 MGP_CBAJ_G0015867.1 mouse_genomes_project 1 76950194 76967256 - Abca12 protein_coding retained_intron MGP_CBAJ_T0020106.1 MGP_CBAJ_G0015867.1 mouse_genomes_project 1 76973085 77083389 - Abca12 protein_coding retained_intron MGP_CBAJ_T0020107.1 MGP_CBAJ_G0015867.1 mouse_genomes_project 1 76997143 77000312 - Abca12 protein_coding retained_intron MGP_CBAJ_T0020108.1 MGP_CBAJ_G0015867.1 mouse_genomes_project 1 77028879 77083375 - Abca12 protein_coding retained_intron MGP_CBAJ_T0098572.1 MGP_CBAJ_G0036827.1 mouse_genomes_project 1 155669298 155669405 + Gm25457 snRNA snRNA MGP_CBAJ_T0012207.1 MGP_CBAJ_G0010319.1 mouse_genomes_project 1 200806704 200807841 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009427.1 MGP_CBAJ_G0007565.1 mouse_genomes_project 1 179362747 179362857 + Mir214 miRNA miRNA MGP_CBAJ_T0011930.1 MGP_CBAJ_G0010042.1 mouse_genomes_project 1 65557886 65558397 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021867.1 MGP_CBAJ_G0016236.1 mouse_genomes_project 1 147446456 147450585 - Optc protein_coding retained_intron MGP_CBAJ_T0021868.1 MGP_CBAJ_G0016236.1 mouse_genomes_project 1 147446456 147456426 - MGP_CBAJ_P0021868 Optc protein_coding protein_coding MGP_CBAJ_T0021869.1 MGP_CBAJ_G0016236.1 mouse_genomes_project 1 147446457 147457253 - MGP_CBAJ_P0021869 Optc protein_coding protein_coding MGP_CBAJ_T0021870.1 MGP_CBAJ_G0016236.1 mouse_genomes_project 1 147446956 147456380 - MGP_CBAJ_P0021870 Optc protein_coding protein_coding MGP_CBAJ_T0021871.1 MGP_CBAJ_G0016236.1 mouse_genomes_project 1 147450091 147456256 - MGP_CBAJ_P0021871 Optc protein_coding protein_coding MGP_CBAJ_T0000565.1 MGP_CBAJ_G0000507.1 mouse_genomes_project 1 135630916 135632977 - TEC TEC MGP_CBAJ_T0099805.1 MGP_CBAJ_G0038060.1 mouse_genomes_project 1 170248278 170248383 - Gm25336 snoRNA snoRNA MGP_CBAJ_T0000416.1 MGP_CBAJ_G0000358.1 mouse_genomes_project 1 38713263 38716017 - TEC TEC MGP_CBAJ_T0021467.1 MGP_CBAJ_G0016148.1 mouse_genomes_project 1 132268719 132271310 + MGP_CBAJ_P0021467 C1ql2 protein_coding protein_coding MGP_CBAJ_T0020890.1 MGP_CBAJ_G0016014.1 mouse_genomes_project 1 95617647 95650468 - MGP_CBAJ_P0020890 Usp40 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020891.1 MGP_CBAJ_G0016014.1 mouse_genomes_project 1 95617649 95690579 - MGP_CBAJ_P0020891 Usp40 protein_coding protein_coding MGP_CBAJ_T0020892.1 MGP_CBAJ_G0016014.1 mouse_genomes_project 1 95618971 95690562 - MGP_CBAJ_P0020892 Usp40 protein_coding protein_coding MGP_CBAJ_T0020893.1 MGP_CBAJ_G0016014.1 mouse_genomes_project 1 95618971 95690562 - MGP_CBAJ_P0020893 Usp40 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020894.1 MGP_CBAJ_G0016014.1 mouse_genomes_project 1 95622227 95624202 - Usp40 protein_coding retained_intron MGP_CBAJ_T0020895.1 MGP_CBAJ_G0016014.1 mouse_genomes_project 1 95625347 95690513 - MGP_CBAJ_P0020895 Usp40 protein_coding unknown_likely_coding MGP_CBAJ_T0020896.1 MGP_CBAJ_G0016014.1 mouse_genomes_project 1 95637544 95639717 - Usp40 protein_coding retained_intron MGP_CBAJ_T0020897.1 MGP_CBAJ_G0016014.1 mouse_genomes_project 1 95662458 95690556 - Usp40 protein_coding retained_intron MGP_CBAJ_T0020898.1 MGP_CBAJ_G0016014.1 mouse_genomes_project 1 95687920 95690578 - Usp40 protein_coding retained_intron MGP_CBAJ_T0020899.1 MGP_CBAJ_G0016014.1 mouse_genomes_project 1 95687920 95690257 - Usp40 protein_coding retained_intron MGP_CBAJ_T0023215.1 MGP_CBAJ_G0016510.1 mouse_genomes_project 1 190168746 190171285 + MGP_CBAJ_P0023215 Gm10521 protein_coding protein_coding MGP_CBAJ_T0020972.1 MGP_CBAJ_G0016040.1 mouse_genomes_project 1 99106562 99107482 + MGP_CBAJ_P0020972 Prlh protein_coding protein_coding MGP_CBAJ_T0000684.1 MGP_CBAJ_G0000624.1 mouse_genomes_project 1 177863871 177864792 + TEC TEC MGP_CBAJ_T0021624.1 MGP_CBAJ_G0016181.1 mouse_genomes_project 1 143912203 143927602 + MGP_CBAJ_P0021624 AA986860 protein_coding protein_coding MGP_CBAJ_T0021625.1 MGP_CBAJ_G0016181.1 mouse_genomes_project 1 143912337 143925445 + AA986860 protein_coding processed_transcript MGP_CBAJ_T0021626.1 MGP_CBAJ_G0016181.1 mouse_genomes_project 1 143923241 143927601 + AA986860 protein_coding retained_intron MGP_CBAJ_T0019928.1 MGP_CBAJ_G0015830.1 mouse_genomes_project 1 67964351 68016808 + MGP_CBAJ_P0019928 Zdbf2 protein_coding protein_coding MGP_CBAJ_T0019929.1 MGP_CBAJ_G0015830.1 mouse_genomes_project 1 67964355 67991530 + MGP_CBAJ_P0019929 Zdbf2 protein_coding protein_coding MGP_CBAJ_T0019930.1 MGP_CBAJ_G0015830.1 mouse_genomes_project 1 67987341 68016807 + MGP_CBAJ_P0019930 Zdbf2 protein_coding protein_coding MGP_CBAJ_T0021481.1 MGP_CBAJ_G0016152.1 mouse_genomes_project 1 133451678 133536362 + MGP_CBAJ_P0021481 Ccdc93 protein_coding protein_coding MGP_CBAJ_T0021482.1 MGP_CBAJ_G0016152.1 mouse_genomes_project 1 133451704 133475654 + Ccdc93 protein_coding retained_intron MGP_CBAJ_T0021483.1 MGP_CBAJ_G0016152.1 mouse_genomes_project 1 133451724 133476347 + Ccdc93 protein_coding processed_transcript MGP_CBAJ_T0021484.1 MGP_CBAJ_G0016152.1 mouse_genomes_project 1 133451737 133470617 + Ccdc93 protein_coding processed_transcript MGP_CBAJ_T0021485.1 MGP_CBAJ_G0016152.1 mouse_genomes_project 1 133451739 133528243 + MGP_CBAJ_P0021485 Ccdc93 protein_coding protein_coding MGP_CBAJ_T0021486.1 MGP_CBAJ_G0016152.1 mouse_genomes_project 1 133517861 133526135 + Ccdc93 protein_coding retained_intron MGP_CBAJ_T0023136.1 MGP_CBAJ_G0016492.1 mouse_genomes_project 1 189467946 189473999 - MGP_CBAJ_P0023136 Usp21 protein_coding protein_coding MGP_CBAJ_T0023137.1 MGP_CBAJ_G0016492.1 mouse_genomes_project 1 189467950 189473932 - MGP_CBAJ_P0023137 Usp21 protein_coding protein_coding MGP_CBAJ_T0023138.1 MGP_CBAJ_G0016492.1 mouse_genomes_project 1 189467959 189468918 - Usp21 protein_coding retained_intron MGP_CBAJ_T0023139.1 MGP_CBAJ_G0016492.1 mouse_genomes_project 1 189467959 189473963 - MGP_CBAJ_P0023139 Usp21 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023140.1 MGP_CBAJ_G0016492.1 mouse_genomes_project 1 189467959 189473969 - MGP_CBAJ_P0023140 Usp21 protein_coding protein_coding MGP_CBAJ_T0023141.1 MGP_CBAJ_G0016492.1 mouse_genomes_project 1 189468303 189469178 - Usp21 protein_coding retained_intron MGP_CBAJ_T0023142.1 MGP_CBAJ_G0016492.1 mouse_genomes_project 1 189468810 189470595 - Usp21 protein_coding retained_intron MGP_CBAJ_T0023143.1 MGP_CBAJ_G0016492.1 mouse_genomes_project 1 189469042 189469996 - Usp21 protein_coding retained_intron MGP_CBAJ_T0023144.1 MGP_CBAJ_G0016492.1 mouse_genomes_project 1 189469416 189471622 - Usp21 protein_coding retained_intron MGP_CBAJ_T0023145.1 MGP_CBAJ_G0016492.1 mouse_genomes_project 1 189469529 189472958 - Usp21 protein_coding retained_intron MGP_CBAJ_T0023146.1 MGP_CBAJ_G0016492.1 mouse_genomes_project 1 189470470 189473967 - Usp21 protein_coding retained_intron MGP_CBAJ_T0023147.1 MGP_CBAJ_G0016492.1 mouse_genomes_project 1 189470939 189472814 - MGP_CBAJ_P0023147 Usp21 protein_coding protein_coding MGP_CBAJ_T0011995.1 MGP_CBAJ_G0010107.1 mouse_genomes_project 1 93911237 93911585 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011885.1 MGP_CBAJ_G0009997.1 mouse_genomes_project 1 52021002 52021997 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002859.1 MGP_CBAJ_G0002692.1 mouse_genomes_project 1 178155580 178160326 - 4930469G21Rik antisense antisense MGP_CBAJ_T0002860.1 MGP_CBAJ_G0002692.1 mouse_genomes_project 1 178157865 178160326 - 4930469G21Rik antisense antisense MGP_CBAJ_T0019291.1 MGP_CBAJ_G0015718.1 mouse_genomes_project 1 44831886 44886657 + MGP_CBAJ_P0019291 Mrps9 protein_coding protein_coding MGP_CBAJ_T0019292.1 MGP_CBAJ_G0015718.1 mouse_genomes_project 1 44831888 44880647 + Mrps9 protein_coding processed_transcript MGP_CBAJ_T0019293.1 MGP_CBAJ_G0015718.1 mouse_genomes_project 1 44831888 44882981 + Mrps9 protein_coding processed_transcript MGP_CBAJ_T0019294.1 MGP_CBAJ_G0015718.1 mouse_genomes_project 1 44831897 44863074 + Mrps9 protein_coding retained_intron MGP_CBAJ_T0019295.1 MGP_CBAJ_G0015718.1 mouse_genomes_project 1 44843635 44880096 + Mrps9 protein_coding retained_intron MGP_CBAJ_T0019296.1 MGP_CBAJ_G0015718.1 mouse_genomes_project 1 44868704 44886651 + MGP_CBAJ_P0019296 Mrps9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019297.1 MGP_CBAJ_G0015718.1 mouse_genomes_project 1 44884024 44886651 + Mrps9 protein_coding retained_intron MGP_CBAJ_T0005800.1 MGP_CBAJ_G0004858.1 mouse_genomes_project 1 133073951 133107613 + Celrr lincRNA lincRNA MGP_CBAJ_T0005801.1 MGP_CBAJ_G0004858.1 mouse_genomes_project 1 133074017 133104351 + Celrr lincRNA lincRNA MGP_CBAJ_T0005802.1 MGP_CBAJ_G0004858.1 mouse_genomes_project 1 133074020 133171034 + Celrr lincRNA lincRNA MGP_CBAJ_T0005803.1 MGP_CBAJ_G0004858.1 mouse_genomes_project 1 133074075 133075479 + Celrr lincRNA lincRNA MGP_CBAJ_T0023290.1 MGP_CBAJ_G0016527.1 mouse_genomes_project 1 190822929 190830804 + MGP_CBAJ_P0023290 Igsf9 protein_coding protein_coding MGP_CBAJ_T0023291.1 MGP_CBAJ_G0016527.1 mouse_genomes_project 1 190823339 190832851 + MGP_CBAJ_P0023291 Igsf9 protein_coding protein_coding MGP_CBAJ_T0023292.1 MGP_CBAJ_G0016527.1 mouse_genomes_project 1 190823346 190830841 + Igsf9 protein_coding processed_transcript MGP_CBAJ_T0023293.1 MGP_CBAJ_G0016527.1 mouse_genomes_project 1 190823355 190840095 + MGP_CBAJ_P0023293 Igsf9 protein_coding protein_coding MGP_CBAJ_T0023294.1 MGP_CBAJ_G0016527.1 mouse_genomes_project 1 190823360 190831024 + Igsf9 protein_coding retained_intron MGP_CBAJ_T0023295.1 MGP_CBAJ_G0016527.1 mouse_genomes_project 1 190823360 190832251 + Igsf9 protein_coding retained_intron MGP_CBAJ_T0023296.1 MGP_CBAJ_G0016527.1 mouse_genomes_project 1 190823371 190840095 + MGP_CBAJ_P0023296 Igsf9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023297.1 MGP_CBAJ_G0016527.1 mouse_genomes_project 1 190823454 190840096 + MGP_CBAJ_P0023297 Igsf9 protein_coding protein_coding MGP_CBAJ_T0023298.1 MGP_CBAJ_G0016527.1 mouse_genomes_project 1 190832296 190833190 + Igsf9 protein_coding retained_intron MGP_CBAJ_T0023299.1 MGP_CBAJ_G0016527.1 mouse_genomes_project 1 190833173 190836079 + MGP_CBAJ_P0023299 Igsf9 protein_coding protein_coding MGP_CBAJ_T0023300.1 MGP_CBAJ_G0016527.1 mouse_genomes_project 1 190835146 190836941 + Igsf9 protein_coding retained_intron MGP_CBAJ_T0023301.1 MGP_CBAJ_G0016527.1 mouse_genomes_project 1 190835173 190836967 + Igsf9 protein_coding retained_intron MGP_CBAJ_T0023302.1 MGP_CBAJ_G0016527.1 mouse_genomes_project 1 190835971 190837429 + Igsf9 protein_coding retained_intron MGP_CBAJ_T0023303.1 MGP_CBAJ_G0016527.1 mouse_genomes_project 1 190838998 190839820 + Igsf9 protein_coding retained_intron MGP_CBAJ_T0023514.1 MGP_CBAJ_G0016598.1 mouse_genomes_project 1 199255418 199315208 - MGP_CBAJ_P0023514 Gm1305 protein_coding protein_coding MGP_CBAJ_T0021249.1 MGP_CBAJ_G0016100.1 mouse_genomes_project 1 106877614 106905650 + MGP_CBAJ_P0021249 Gin1 protein_coding protein_coding MGP_CBAJ_T0021250.1 MGP_CBAJ_G0016100.1 mouse_genomes_project 1 106877621 106885611 + MGP_CBAJ_P0021250 Gin1 protein_coding protein_coding MGP_CBAJ_T0021251.1 MGP_CBAJ_G0016100.1 mouse_genomes_project 1 106877639 106906390 + MGP_CBAJ_P0021251 Gin1 protein_coding protein_coding MGP_CBAJ_T0021252.1 MGP_CBAJ_G0016100.1 mouse_genomes_project 1 106877643 106878448 + Gin1 protein_coding processed_transcript MGP_CBAJ_T0021253.1 MGP_CBAJ_G0016100.1 mouse_genomes_project 1 106877652 106905687 + MGP_CBAJ_P0021253 Gin1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021254.1 MGP_CBAJ_G0016100.1 mouse_genomes_project 1 106881190 106883512 + Gin1 protein_coding retained_intron MGP_CBAJ_T0021255.1 MGP_CBAJ_G0016100.1 mouse_genomes_project 1 106884870 106893343 + MGP_CBAJ_P0021255 Gin1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0005715.1 MGP_CBAJ_G0004787.1 mouse_genomes_project 1 85087971 85110977 - 5730419F03Rik lincRNA lincRNA MGP_CBAJ_T0018743.1 MGP_CBAJ_G0015602.1 mouse_genomes_project 1 15146876 15168299 + MGP_CBAJ_P0018743 Tmem70 protein_coding protein_coding MGP_CBAJ_T0018744.1 MGP_CBAJ_G0015602.1 mouse_genomes_project 1 15146879 15167318 + Tmem70 protein_coding processed_transcript MGP_CBAJ_T0018745.1 MGP_CBAJ_G0015602.1 mouse_genomes_project 1 15146879 15168379 + MGP_CBAJ_P0018745 Tmem70 protein_coding protein_coding MGP_CBAJ_T0018746.1 MGP_CBAJ_G0015602.1 mouse_genomes_project 1 15146905 15147481 + Tmem70 protein_coding processed_transcript MGP_CBAJ_T0020951.1 MGP_CBAJ_G0016036.1 mouse_genomes_project 1 98279629 98292398 + MGP_CBAJ_P0020951 Ackr3 protein_coding protein_coding MGP_CBAJ_T0020952.1 MGP_CBAJ_G0016036.1 mouse_genomes_project 1 98279655 98289480 + MGP_CBAJ_P0020952 Ackr3 protein_coding protein_coding MGP_CBAJ_T0000413.1 MGP_CBAJ_G0000355.1 mouse_genomes_project 1 38073585 38077137 - TEC TEC MGP_CBAJ_T0024046.1 MGP_CBAJ_G0016702.1 mouse_genomes_project 1 216282627 216340655 - MGP_CBAJ_P0024046 Cd46 protein_coding protein_coding MGP_CBAJ_T0024047.1 MGP_CBAJ_G0016702.1 mouse_genomes_project 1 216287636 216314601 - Cd46 protein_coding retained_intron MGP_CBAJ_T0024048.1 MGP_CBAJ_G0016702.1 mouse_genomes_project 1 216287701 216340631 - MGP_CBAJ_P0024048 Cd46 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024049.1 MGP_CBAJ_G0016702.1 mouse_genomes_project 1 216287724 216329075 - Cd46 protein_coding retained_intron MGP_CBAJ_T0012058.1 MGP_CBAJ_G0010170.1 mouse_genomes_project 1 123298524 123299193 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011732.1 MGP_CBAJ_G0009844.1 mouse_genomes_project 1 3808751 3809224 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005755.1 MGP_CBAJ_G0004822.1 mouse_genomes_project 1 100922737 100924998 + Gm28479 lincRNA lincRNA MGP_CBAJ_T0021116.1 MGP_CBAJ_G0016071.1 mouse_genomes_project 1 101333132 101371645 + MGP_CBAJ_P0021116 Gpr35 protein_coding protein_coding MGP_CBAJ_T0021117.1 MGP_CBAJ_G0016071.1 mouse_genomes_project 1 101344247 101371968 + MGP_CBAJ_P0021117 Gpr35 protein_coding protein_coding MGP_CBAJ_T0021118.1 MGP_CBAJ_G0016071.1 mouse_genomes_project 1 101362077 101375212 + MGP_CBAJ_P0021118 Gpr35 protein_coding protein_coding MGP_CBAJ_T0021119.1 MGP_CBAJ_G0016071.1 mouse_genomes_project 1 101362077 101374003 + MGP_CBAJ_P0021119 Gpr35 protein_coding protein_coding MGP_CBAJ_T0021120.1 MGP_CBAJ_G0016071.1 mouse_genomes_project 1 101364302 101374823 + MGP_CBAJ_P0021120 Gpr35 protein_coding protein_coding MGP_CBAJ_T0021121.1 MGP_CBAJ_G0016071.1 mouse_genomes_project 1 101367875 101375350 + MGP_CBAJ_P0021121 Gpr35 protein_coding protein_coding MGP_CBAJ_T0000669.1 MGP_CBAJ_G0000609.1 mouse_genomes_project 1 175216251 175218869 + TEC TEC MGP_CBAJ_T0009426.1 MGP_CBAJ_G0007564.1 mouse_genomes_project 1 179357206 179357316 + Mir199a-2 miRNA miRNA MGP_CBAJ_T0009417.1 MGP_CBAJ_G0007555.1 mouse_genomes_project 1 149250322 149250403 - Mir1231 miRNA miRNA MGP_CBAJ_T0019973.1 MGP_CBAJ_G0015840.1 mouse_genomes_project 1 69611697 69618891 - MGP_CBAJ_P0019973 Fzd5 protein_coding protein_coding MGP_CBAJ_T0019974.1 MGP_CBAJ_G0015840.1 mouse_genomes_project 1 69615608 69618889 - MGP_CBAJ_P0019974 Fzd5 protein_coding protein_coding MGP_CBAJ_T0000612.1 MGP_CBAJ_G0000553.1 mouse_genomes_project 1 151798719 151804317 - TEC TEC MGP_CBAJ_T0098590.1 MGP_CBAJ_G0036845.1 mouse_genomes_project 1 195745674 195745782 + Gm26104 snRNA snRNA MGP_CBAJ_T0011961.1 MGP_CBAJ_G0010073.1 mouse_genomes_project 1 76695577 76695956 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097869.1 MGP_CBAJ_G0036142.1 mouse_genomes_project 1 83445516 83445610 + Gm25974 rRNA rRNA MGP_CBAJ_T0005565.1 MGP_CBAJ_G0004677.1 mouse_genomes_project 1 10706891 10707744 - Gm29663 lincRNA lincRNA MGP_CBAJ_T0019303.1 MGP_CBAJ_G0015720.1 mouse_genomes_project 1 45023297 45079863 - MGP_CBAJ_P0019303 Tgfbrap1 protein_coding protein_coding MGP_CBAJ_T0019304.1 MGP_CBAJ_G0015720.1 mouse_genomes_project 1 45023317 45071237 - MGP_CBAJ_P0019304 Tgfbrap1 protein_coding protein_coding MGP_CBAJ_T0019305.1 MGP_CBAJ_G0015720.1 mouse_genomes_project 1 45030805 45037031 - Tgfbrap1 protein_coding retained_intron MGP_CBAJ_T0019306.1 MGP_CBAJ_G0015720.1 mouse_genomes_project 1 45035988 45070955 - MGP_CBAJ_P0019306 Tgfbrap1 protein_coding protein_coding MGP_CBAJ_T0019307.1 MGP_CBAJ_G0015720.1 mouse_genomes_project 1 45047723 45079849 - MGP_CBAJ_P0019307 Tgfbrap1 protein_coding protein_coding MGP_CBAJ_T0019308.1 MGP_CBAJ_G0015720.1 mouse_genomes_project 1 45050468 45070971 - Tgfbrap1 protein_coding retained_intron MGP_CBAJ_T0019309.1 MGP_CBAJ_G0015720.1 mouse_genomes_project 1 45050709 45079878 - Tgfbrap1 protein_coding retained_intron MGP_CBAJ_T0019310.1 MGP_CBAJ_G0015720.1 mouse_genomes_project 1 45051843 45079605 - MGP_CBAJ_P0019310 Tgfbrap1 protein_coding protein_coding MGP_CBAJ_T0011765.1 MGP_CBAJ_G0009877.1 mouse_genomes_project 1 10685964 10686651 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000448.1 MGP_CBAJ_G0000390.1 mouse_genomes_project 1 64093368 64096806 + TEC TEC MGP_CBAJ_T0012052.1 MGP_CBAJ_G0010164.1 mouse_genomes_project 1 122149279 122150060 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005627.1 MGP_CBAJ_G0004721.1 mouse_genomes_project 1 44706581 44708751 + Dalir lincRNA lincRNA MGP_CBAJ_T0023673.1 MGP_CBAJ_G0016627.1 mouse_genomes_project 1 202215769 202222809 - MGP_CBAJ_P0023673 Degs1 protein_coding protein_coding MGP_CBAJ_T0023674.1 MGP_CBAJ_G0016627.1 mouse_genomes_project 1 202218488 202222809 - Degs1 protein_coding retained_intron MGP_CBAJ_T0023675.1 MGP_CBAJ_G0016627.1 mouse_genomes_project 1 202219023 202222229 - MGP_CBAJ_P0023675 Degs1 protein_coding protein_coding MGP_CBAJ_T0000761.1 MGP_CBAJ_G0000699.1 mouse_genomes_project 1 213145649 213145782 + TEC TEC MGP_CBAJ_T0011867.1 MGP_CBAJ_G0009979.1 mouse_genomes_project 1 47744204 47744728 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0020151.1 MGP_CBAJ_G0015876.1 mouse_genomes_project 1 78476364 78546560 - MGP_CBAJ_P0020151 Ankar protein_coding protein_coding MGP_CBAJ_T0012211.1 MGP_CBAJ_G0010323.1 mouse_genomes_project 1 202070500 202071283 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000329.1 MGP_CBAJ_G0000274.1 mouse_genomes_project 1 2177159 2178271 - TEC TEC MGP_CBAJ_T0000621.1 MGP_CBAJ_G0000561.1 mouse_genomes_project 1 152251895 152258645 - TEC TEC MGP_CBAJ_T0012182.1 MGP_CBAJ_G0010294.1 mouse_genomes_project 1 183623914 183624267 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002818.1 MGP_CBAJ_G0002659.1 mouse_genomes_project 1 145708625 145710008 + Gm15849 antisense antisense MGP_CBAJ_T0002787.1 MGP_CBAJ_G0002637.1 mouse_genomes_project 1 101212996 101219789 - Gm29480 antisense antisense MGP_CBAJ_T0000627.1 MGP_CBAJ_G0000567.1 mouse_genomes_project 1 153240534 153242995 + TEC TEC MGP_CBAJ_T0011951.1 MGP_CBAJ_G0010063.1 mouse_genomes_project 1 70514672 70515446 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011907.1 MGP_CBAJ_G0010019.1 mouse_genomes_project 1 58780508 58780817 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0020643.1 MGP_CBAJ_G0015966.1 mouse_genomes_project 1 90177480 90199939 + Daw1 protein_coding retained_intron MGP_CBAJ_T0020644.1 MGP_CBAJ_G0015966.1 mouse_genomes_project 1 90177490 90233461 + MGP_CBAJ_P0020644 Daw1 protein_coding protein_coding MGP_CBAJ_T0020645.1 MGP_CBAJ_G0015966.1 mouse_genomes_project 1 90177490 90233467 + MGP_CBAJ_P0020645 Daw1 protein_coding protein_coding MGP_CBAJ_T0020646.1 MGP_CBAJ_G0015966.1 mouse_genomes_project 1 90177497 90233463 + MGP_CBAJ_P0020646 Daw1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020647.1 MGP_CBAJ_G0015966.1 mouse_genomes_project 1 90177509 90233467 + MGP_CBAJ_P0020647 Daw1 protein_coding protein_coding MGP_CBAJ_T0000340.1 MGP_CBAJ_G0000285.1 mouse_genomes_project 1 7835192 7836112 - TEC TEC MGP_CBAJ_T0020994.1 MGP_CBAJ_G0016044.1 mouse_genomes_project 1 99350663 99377661 + MGP_CBAJ_P0020994 Ramp1 protein_coding protein_coding MGP_CBAJ_T0020995.1 MGP_CBAJ_G0016044.1 mouse_genomes_project 1 99350883 99377661 + MGP_CBAJ_P0020995 Ramp1 protein_coding protein_coding MGP_CBAJ_T0020996.1 MGP_CBAJ_G0016044.1 mouse_genomes_project 1 99350887 99398256 + MGP_CBAJ_P0020996 Ramp1 protein_coding protein_coding MGP_CBAJ_T0011963.1 MGP_CBAJ_G0010075.1 mouse_genomes_project 1 77180777 77180855 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0022745.1 MGP_CBAJ_G0016402.1 mouse_genomes_project 1 179825672 179836147 + MGP_CBAJ_P0022745 Myoc protein_coding protein_coding MGP_CBAJ_T0005854.1 MGP_CBAJ_G0004903.1 mouse_genomes_project 1 170166037 170168859 - Gm29291 lincRNA lincRNA MGP_CBAJ_T0005855.1 MGP_CBAJ_G0004903.1 mouse_genomes_project 1 170166193 170168863 - Gm29291 lincRNA lincRNA MGP_CBAJ_T0011846.1 MGP_CBAJ_G0009958.1 mouse_genomes_project 1 38714604 38716395 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005759.1 MGP_CBAJ_G0004826.1 mouse_genomes_project 1 103464305 103472105 + 4930440C22Rik lincRNA lincRNA MGP_CBAJ_T0005760.1 MGP_CBAJ_G0004826.1 mouse_genomes_project 1 103464664 103472125 + 4930440C22Rik lincRNA lincRNA MGP_CBAJ_T0099755.1 MGP_CBAJ_G0038010.1 mouse_genomes_project 1 55036481 55036603 - Gm27607 snoRNA snoRNA MGP_CBAJ_T0002886.1 MGP_CBAJ_G0002712.1 mouse_genomes_project 1 190532174 190532834 + Gm17224 antisense antisense MGP_CBAJ_T0098562.1 MGP_CBAJ_G0036817.1 mouse_genomes_project 1 141322057 141322162 - Gm25384 snRNA snRNA MGP_CBAJ_T0012128.1 MGP_CBAJ_G0010240.1 mouse_genomes_project 1 160117172 160118165 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000677.1 MGP_CBAJ_G0000617.1 mouse_genomes_project 1 177494214 177495472 - TEC TEC MGP_CBAJ_T0022126.1 MGP_CBAJ_G0016291.1 mouse_genomes_project 1 153008667 153013535 - MGP_CBAJ_P0022126 2310009B15Rik protein_coding protein_coding MGP_CBAJ_T0022127.1 MGP_CBAJ_G0016291.1 mouse_genomes_project 1 153008668 153011035 - 2310009B15Rik protein_coding retained_intron MGP_CBAJ_T0022128.1 MGP_CBAJ_G0016291.1 mouse_genomes_project 1 153008717 153013530 - MGP_CBAJ_P0022128 2310009B15Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0023274.1 MGP_CBAJ_G0016522.1 mouse_genomes_project 1 190590153 190616414 - MGP_CBAJ_P0023274 Atp1a2 protein_coding protein_coding MGP_CBAJ_T0023275.1 MGP_CBAJ_G0016522.1 mouse_genomes_project 1 190593016 190616414 - Atp1a2 protein_coding retained_intron MGP_CBAJ_T0023276.1 MGP_CBAJ_G0016522.1 mouse_genomes_project 1 190594370 190594905 - Atp1a2 protein_coding retained_intron MGP_CBAJ_T0023277.1 MGP_CBAJ_G0016522.1 mouse_genomes_project 1 190596524 190616414 - MGP_CBAJ_P0023277 Atp1a2 protein_coding protein_coding MGP_CBAJ_T0023278.1 MGP_CBAJ_G0016522.1 mouse_genomes_project 1 190602646 190616414 - Atp1a2 protein_coding retained_intron MGP_CBAJ_T0009383.1 MGP_CBAJ_G0007521.1 mouse_genomes_project 1 80212042 80212109 - Mir1928 miRNA miRNA MGP_CBAJ_T0098588.1 MGP_CBAJ_G0036843.1 mouse_genomes_project 1 191245576 191245673 - Gm24817 snRNA snRNA MGP_CBAJ_T0005568.1 MGP_CBAJ_G0004680.1 mouse_genomes_project 1 15637167 15643997 + Gm28783 lincRNA lincRNA MGP_CBAJ_T0000603.1 MGP_CBAJ_G0000544.1 mouse_genomes_project 1 148104974 148105956 - TEC TEC MGP_CBAJ_T0022796.1 MGP_CBAJ_G0016413.1 mouse_genomes_project 1 181034605 181059832 - MGP_CBAJ_P0022796 Mettl11b protein_coding protein_coding MGP_CBAJ_T0022797.1 MGP_CBAJ_G0016413.1 mouse_genomes_project 1 181035348 181059832 - MGP_CBAJ_P0022797 Mettl11b protein_coding nonsense_mediated_decay MGP_CBAJ_T0019965.1 MGP_CBAJ_G0015838.1 mouse_genomes_project 1 69480081 69491882 - MGP_CBAJ_P0019965 Mettl21a protein_coding protein_coding MGP_CBAJ_T0019966.1 MGP_CBAJ_G0015838.1 mouse_genomes_project 1 69480088 69491808 - MGP_CBAJ_P0019966 Mettl21a protein_coding protein_coding MGP_CBAJ_T0019967.1 MGP_CBAJ_G0015838.1 mouse_genomes_project 1 69481564 69490271 - Mettl21a protein_coding processed_transcript MGP_CBAJ_T0019968.1 MGP_CBAJ_G0015838.1 mouse_genomes_project 1 69488840 69491824 - Mettl21a protein_coding processed_transcript MGP_CBAJ_T0005570.1 MGP_CBAJ_G0004682.1 mouse_genomes_project 1 16944434 16951966 + lincRNA lincRNA MGP_CBAJ_T0009409.1 MGP_CBAJ_G0007547.1 mouse_genomes_project 1 116718949 116719085 - Mir3473f miRNA miRNA MGP_CBAJ_T0016794.1 MGP_CBAJ_G0014857.1 mouse_genomes_project 1 169443794 169447066 - E330020D12Rik processed_transcript retained_intron MGP_CBAJ_T0016795.1 MGP_CBAJ_G0014857.1 mouse_genomes_project 1 169443794 169452948 - E330020D12Rik processed_transcript processed_transcript MGP_CBAJ_T0012176.1 MGP_CBAJ_G0010288.1 mouse_genomes_project 1 181883958 181884274 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0023410.1 MGP_CBAJ_G0016574.1 mouse_genomes_project 1 194618120 194648468 - MGP_CBAJ_P0023410 Opn3 protein_coding protein_coding MGP_CBAJ_T0012184.1 MGP_CBAJ_G0010296.1 mouse_genomes_project 1 184431235 184431547 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012191.1 MGP_CBAJ_G0010303.1 mouse_genomes_project 1 189558721 189559057 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002830.1 MGP_CBAJ_G0002667.1 mouse_genomes_project 1 149004080 149021858 + Gm26642 antisense antisense MGP_CBAJ_T0101492.1 MGP_CBAJ_G0039524.1 mouse_genomes_project 1 187796217 187796421 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0023793.1 MGP_CBAJ_G0016656.1 mouse_genomes_project 1 207417019 207420231 + MGP_CBAJ_P0023793 D1Pas1 protein_coding protein_coding MGP_CBAJ_T0000511.1 MGP_CBAJ_G0000453.1 mouse_genomes_project 1 91994449 91999202 - TEC TEC MGP_CBAJ_T0012010.1 MGP_CBAJ_G0010122.1 mouse_genomes_project 1 101727853 101728399 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023079.1 MGP_CBAJ_G0016482.1 mouse_genomes_project 1 189319977 189332687 + MGP_CBAJ_P0023079 Mpz protein_coding protein_coding MGP_CBAJ_T0023080.1 MGP_CBAJ_G0016482.1 mouse_genomes_project 1 189324776 189329763 + MGP_CBAJ_P0023080 Mpz protein_coding protein_coding MGP_CBAJ_T0023081.1 MGP_CBAJ_G0016482.1 mouse_genomes_project 1 189328849 189329486 + Mpz protein_coding processed_transcript MGP_CBAJ_T0023082.1 MGP_CBAJ_G0016482.1 mouse_genomes_project 1 189328958 189329501 + Mpz protein_coding processed_transcript MGP_CBAJ_T0005722.1 MGP_CBAJ_G0004792.1 mouse_genomes_project 1 86864654 86868395 + 2310015K22Rik lincRNA lincRNA MGP_CBAJ_T0021983.1 MGP_CBAJ_G0016264.1 mouse_genomes_project 1 149099327 149142388 + MGP_CBAJ_P0021983 Lmod1 protein_coding protein_coding MGP_CBAJ_T0023360.1 MGP_CBAJ_G0016551.1 mouse_genomes_project 1 192489694 192518250 - MGP_CBAJ_P0023360 Ifi204 protein_coding protein_coding MGP_CBAJ_T0022312.1 MGP_CBAJ_G0016326.1 mouse_genomes_project 1 167717624 167981666 - MGP_CBAJ_P0022312 1700025G04Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0022313.1 MGP_CBAJ_G0016326.1 mouse_genomes_project 1 167751692 167981821 - MGP_CBAJ_P0022313 1700025G04Rik protein_coding protein_coding MGP_CBAJ_T0022314.1 MGP_CBAJ_G0016326.1 mouse_genomes_project 1 167761312 167792168 - 1700025G04Rik protein_coding retained_intron MGP_CBAJ_T0022315.1 MGP_CBAJ_G0016326.1 mouse_genomes_project 1 167761649 167939473 - MGP_CBAJ_P0022315 1700025G04Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0019374.1 MGP_CBAJ_G0015734.1 mouse_genomes_project 1 46648014 46917262 + MGP_CBAJ_P0019374 Gulp1 protein_coding protein_coding MGP_CBAJ_T0019375.1 MGP_CBAJ_G0015734.1 mouse_genomes_project 1 46648196 46906500 + MGP_CBAJ_P0019375 Gulp1 protein_coding protein_coding MGP_CBAJ_T0019376.1 MGP_CBAJ_G0015734.1 mouse_genomes_project 1 46648196 46917250 + MGP_CBAJ_P0019376 Gulp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019377.1 MGP_CBAJ_G0015734.1 mouse_genomes_project 1 46648230 46906149 + Gulp1 protein_coding processed_transcript MGP_CBAJ_T0019378.1 MGP_CBAJ_G0015734.1 mouse_genomes_project 1 46649096 46804457 + MGP_CBAJ_P0019378 Gulp1 protein_coding protein_coding MGP_CBAJ_T0019379.1 MGP_CBAJ_G0015734.1 mouse_genomes_project 1 46791614 46917249 + MGP_CBAJ_P0019379 Gulp1 protein_coding protein_coding MGP_CBAJ_T0023084.1 MGP_CBAJ_G0016484.1 mouse_genomes_project 1 189390033 189394912 + MGP_CBAJ_P0023084 Nr1i3 protein_coding protein_coding MGP_CBAJ_T0023085.1 MGP_CBAJ_G0016484.1 mouse_genomes_project 1 189390034 189394910 + MGP_CBAJ_P0023085 Nr1i3 protein_coding protein_coding MGP_CBAJ_T0023086.1 MGP_CBAJ_G0016484.1 mouse_genomes_project 1 189390049 189396769 + MGP_CBAJ_P0023086 Nr1i3 protein_coding protein_coding MGP_CBAJ_T0023087.1 MGP_CBAJ_G0016484.1 mouse_genomes_project 1 189390057 189395068 + Nr1i3 protein_coding retained_intron MGP_CBAJ_T0023088.1 MGP_CBAJ_G0016484.1 mouse_genomes_project 1 189390065 189394912 + MGP_CBAJ_P0023088 Nr1i3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023089.1 MGP_CBAJ_G0016484.1 mouse_genomes_project 1 189390084 189395260 + Nr1i3 protein_coding retained_intron MGP_CBAJ_T0023090.1 MGP_CBAJ_G0016484.1 mouse_genomes_project 1 189390084 189394911 + MGP_CBAJ_P0023090 Nr1i3 protein_coding protein_coding MGP_CBAJ_T0023091.1 MGP_CBAJ_G0016484.1 mouse_genomes_project 1 189390415 189394785 + Nr1i3 protein_coding retained_intron MGP_CBAJ_T0023498.1 MGP_CBAJ_G0016594.1 mouse_genomes_project 1 199065639 199088576 - MGP_CBAJ_P0023498 Tfb2m protein_coding protein_coding MGP_CBAJ_T0023500.1 MGP_CBAJ_G0016594.1 mouse_genomes_project 1 199070805 199075976 - Tfb2m protein_coding processed_transcript MGP_CBAJ_T0023501.1 MGP_CBAJ_G0016594.1 mouse_genomes_project 1 199071166 199076006 - Tfb2m protein_coding processed_transcript MGP_CBAJ_T0023502.1 MGP_CBAJ_G0016594.1 mouse_genomes_project 1 199073636 199088526 - Tfb2m protein_coding processed_transcript MGP_CBAJ_T0023503.1 MGP_CBAJ_G0016594.1 mouse_genomes_project 1 199075963 199088201 - Tfb2m protein_coding processed_transcript MGP_CBAJ_T0018827.1 MGP_CBAJ_G0015628.1 mouse_genomes_project 1 23111944 23159095 + MGP_CBAJ_P0018827 B3gat2 protein_coding protein_coding MGP_CBAJ_T0018828.1 MGP_CBAJ_G0015628.1 mouse_genomes_project 1 23112568 23187924 + MGP_CBAJ_P0018828 B3gat2 protein_coding protein_coding MGP_CBAJ_T0101445.1 MGP_CBAJ_G0039477.1 mouse_genomes_project 1 20413931 20415026 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0023693.1 MGP_CBAJ_G0016633.1 mouse_genomes_project 1 202773181 202880878 + MGP_CBAJ_P0023693 Susd4 protein_coding protein_coding MGP_CBAJ_T0023694.1 MGP_CBAJ_G0016633.1 mouse_genomes_project 1 202773333 202924940 + MGP_CBAJ_P0023694 Susd4 protein_coding protein_coding MGP_CBAJ_T0023695.1 MGP_CBAJ_G0016633.1 mouse_genomes_project 1 202773716 202856388 + MGP_CBAJ_P0023695 Susd4 protein_coding protein_coding MGP_CBAJ_T0023696.1 MGP_CBAJ_G0016633.1 mouse_genomes_project 1 202773877 202856414 + MGP_CBAJ_P0023696 Susd4 protein_coding protein_coding MGP_CBAJ_T0023697.1 MGP_CBAJ_G0016633.1 mouse_genomes_project 1 202774216 202926299 + MGP_CBAJ_P0023697 Susd4 protein_coding protein_coding MGP_CBAJ_T0009420.1 MGP_CBAJ_G0007558.1 mouse_genomes_project 1 167259029 167259087 + Mir7682 miRNA miRNA MGP_CBAJ_T0005756.1 MGP_CBAJ_G0004823.1 mouse_genomes_project 1 101072834 101075804 - Gm29483 lincRNA lincRNA MGP_CBAJ_T0005607.1 MGP_CBAJ_G0004714.1 mouse_genomes_project 1 43286554 43302111 - lincRNA lincRNA MGP_CBAJ_T0019444.1 MGP_CBAJ_G0015747.1 mouse_genomes_project 1 55086922 55219958 + MGP_CBAJ_P0019444 Stat4 protein_coding protein_coding MGP_CBAJ_T0019445.1 MGP_CBAJ_G0015747.1 mouse_genomes_project 1 55112599 55219953 + MGP_CBAJ_P0019445 Stat4 protein_coding protein_coding MGP_CBAJ_T0019446.1 MGP_CBAJ_G0015747.1 mouse_genomes_project 1 55112982 55179798 + Stat4 protein_coding retained_intron MGP_CBAJ_T0019447.1 MGP_CBAJ_G0015747.1 mouse_genomes_project 1 55218217 55219957 + Stat4 protein_coding retained_intron MGP_CBAJ_T0000449.1 MGP_CBAJ_G0000391.1 mouse_genomes_project 1 64184831 64185552 - TEC TEC MGP_CBAJ_T0011805.1 MGP_CBAJ_G0009917.1 mouse_genomes_project 1 26126669 26127320 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0019994.1 MGP_CBAJ_G0015847.1 mouse_genomes_project 1 70022756 70025156 - Cryga protein_coding retained_intron MGP_CBAJ_T0019995.1 MGP_CBAJ_G0015847.1 mouse_genomes_project 1 70022756 70025169 - MGP_CBAJ_P0019995 Cryga protein_coding protein_coding MGP_CBAJ_T0019624.1 MGP_CBAJ_G0015781.1 mouse_genomes_project 1 61266244 61275094 + MGP_CBAJ_P0019624 1700066M21Rik protein_coding protein_coding MGP_CBAJ_T0019625.1 MGP_CBAJ_G0015781.1 mouse_genomes_project 1 61266260 61268790 + 1700066M21Rik protein_coding processed_transcript MGP_CBAJ_T0019626.1 MGP_CBAJ_G0015781.1 mouse_genomes_project 1 61266267 61268706 + 1700066M21Rik protein_coding processed_transcript MGP_CBAJ_T0002909.1 MGP_CBAJ_G0002732.1 mouse_genomes_project 1 207573944 207576659 + 1700007P06Rik antisense antisense MGP_CBAJ_T0098228.1 MGP_CBAJ_G0036501.1 mouse_genomes_project 1 54970035 54972534 - Gm28323 sense_intronic sense_intronic MGP_CBAJ_T0016762.1 MGP_CBAJ_G0014847.1 mouse_genomes_project 1 107173559 107178112 - B230216N24Rik processed_transcript retained_intron MGP_CBAJ_T0016763.1 MGP_CBAJ_G0014847.1 mouse_genomes_project 1 107173570 107197834 - B230216N24Rik processed_transcript sense_intronic MGP_CBAJ_T0016764.1 MGP_CBAJ_G0014847.1 mouse_genomes_project 1 107174160 107197868 - B230216N24Rik processed_transcript sense_intronic MGP_CBAJ_T0016765.1 MGP_CBAJ_G0014847.1 mouse_genomes_project 1 107174311 107207741 - B230216N24Rik processed_transcript sense_intronic MGP_CBAJ_T0016766.1 MGP_CBAJ_G0014847.1 mouse_genomes_project 1 107195891 107197829 - B230216N24Rik processed_transcript retained_intron MGP_CBAJ_T0018911.1 MGP_CBAJ_G0015646.1 mouse_genomes_project 1 34500087 34517291 - MGP_CBAJ_P0018911 Bag2 protein_coding protein_coding MGP_CBAJ_T0018912.1 MGP_CBAJ_G0015646.1 mouse_genomes_project 1 34501341 34503340 - Bag2 protein_coding retained_intron MGP_CBAJ_T0018913.1 MGP_CBAJ_G0015646.1 mouse_genomes_project 1 34501404 34517237 - MGP_CBAJ_P0018913 Bag2 protein_coding protein_coding MGP_CBAJ_T0018914.1 MGP_CBAJ_G0015646.1 mouse_genomes_project 1 34516297 34517223 - Bag2 protein_coding retained_intron MGP_CBAJ_T0012227.1 MGP_CBAJ_G0010339.1 mouse_genomes_project 1 212801811 212802143 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002783.1 MGP_CBAJ_G0002633.1 mouse_genomes_project 1 99489537 99508562 - Gm17090 antisense antisense MGP_CBAJ_T0002675.1 MGP_CBAJ_G0002555.1 mouse_genomes_project 1 558918 607788 + Gm1992 antisense antisense MGP_CBAJ_T0011772.1 MGP_CBAJ_G0009884.1 mouse_genomes_project 1 15144924 15145607 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005592.1 MGP_CBAJ_G0004702.1 mouse_genomes_project 1 36773072 36778943 + lincRNA lincRNA MGP_CBAJ_T0000394.1 MGP_CBAJ_G0000337.1 mouse_genomes_project 1 33038814 33040611 + TEC TEC MGP_CBAJ_T0018572.1 MGP_CBAJ_G0015575.1 mouse_genomes_project 1 7720876 7728619 - MGP_CBAJ_P0018572 Tcf24 protein_coding protein_coding MGP_CBAJ_T0018573.1 MGP_CBAJ_G0015575.1 mouse_genomes_project 1 7720884 7723522 - MGP_CBAJ_P0018573 Tcf24 protein_coding protein_coding MGP_CBAJ_T0011896.1 MGP_CBAJ_G0010008.1 mouse_genomes_project 1 55641644 55642660 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0020662.1 MGP_CBAJ_G0015969.1 mouse_genomes_project 1 91527434 91874115 - MGP_CBAJ_P0020662 Dner protein_coding protein_coding MGP_CBAJ_T0020663.1 MGP_CBAJ_G0015969.1 mouse_genomes_project 1 91704832 91873913 - Dner protein_coding retained_intron MGP_CBAJ_T0020664.1 MGP_CBAJ_G0015969.1 mouse_genomes_project 1 91741977 91805134 - MGP_CBAJ_P0020664 Dner protein_coding protein_coding MGP_CBAJ_T0020665.1 MGP_CBAJ_G0015969.1 mouse_genomes_project 1 91744266 91788499 - MGP_CBAJ_P0020665 Dner protein_coding protein_coding MGP_CBAJ_T0012193.1 MGP_CBAJ_G0010305.1 mouse_genomes_project 1 189983872 189984424 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021907.1 MGP_CBAJ_G0016248.1 mouse_genomes_project 1 148054862 148057251 + Cyb5r1 protein_coding processed_transcript MGP_CBAJ_T0021908.1 MGP_CBAJ_G0016248.1 mouse_genomes_project 1 148055041 148060999 + MGP_CBAJ_P0021908 Cyb5r1 protein_coding protein_coding MGP_CBAJ_T0021909.1 MGP_CBAJ_G0016248.1 mouse_genomes_project 1 148055041 148060995 + MGP_CBAJ_P0021909 Cyb5r1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021910.1 MGP_CBAJ_G0016248.1 mouse_genomes_project 1 148055255 148056863 + Cyb5r1 protein_coding processed_transcript MGP_CBAJ_T0021911.1 MGP_CBAJ_G0016248.1 mouse_genomes_project 1 148055263 148056855 + Cyb5r1 protein_coding processed_transcript MGP_CBAJ_T0021912.1 MGP_CBAJ_G0016248.1 mouse_genomes_project 1 148055264 148058926 + MGP_CBAJ_P0021912 Cyb5r1 protein_coding protein_coding MGP_CBAJ_T0021913.1 MGP_CBAJ_G0016248.1 mouse_genomes_project 1 148055280 148058127 + Cyb5r1 protein_coding retained_intron MGP_CBAJ_T0021914.1 MGP_CBAJ_G0016248.1 mouse_genomes_project 1 148055288 148059260 + Cyb5r1 protein_coding retained_intron MGP_CBAJ_T0021915.1 MGP_CBAJ_G0016248.1 mouse_genomes_project 1 148055573 148060230 + MGP_CBAJ_P0021915 Cyb5r1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021916.1 MGP_CBAJ_G0016248.1 mouse_genomes_project 1 148055573 148056928 + MGP_CBAJ_P0021916 Cyb5r1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0000522.1 MGP_CBAJ_G0000464.1 mouse_genomes_project 1 94578000 94580928 + TEC TEC MGP_CBAJ_T0016714.1 MGP_CBAJ_G0014826.1 mouse_genomes_project 1 1714473 1717301 + Gm37587 processed_transcript retained_intron MGP_CBAJ_T0016715.1 MGP_CBAJ_G0014826.1 mouse_genomes_project 1 1715396 1717483 + Gm37587 processed_transcript antisense MGP_CBAJ_T0011727.1 MGP_CBAJ_G0009839.1 mouse_genomes_project 1 2382063 2383651 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000562.1 MGP_CBAJ_G0000504.1 mouse_genomes_project 1 135033917 135038376 + TEC TEC MGP_CBAJ_T0000615.1 MGP_CBAJ_G0000556.1 mouse_genomes_project 1 151972726 151979863 + TEC TEC MGP_CBAJ_T0000472.1 MGP_CBAJ_G0000414.1 mouse_genomes_project 1 73174376 73176677 + TEC TEC MGP_CBAJ_T0019283.1 MGP_CBAJ_G0015714.1 mouse_genomes_project 1 42335637 42442378 + MGP_CBAJ_P0019283 Slc9a2 protein_coding protein_coding MGP_CBAJ_T0019284.1 MGP_CBAJ_G0015714.1 mouse_genomes_project 1 42336660 42393177 + MGP_CBAJ_P0019284 Slc9a2 protein_coding protein_coding MGP_CBAJ_T0019285.1 MGP_CBAJ_G0015714.1 mouse_genomes_project 1 42426591 42427907 + Slc9a2 protein_coding retained_intron MGP_CBAJ_T0005951.1 MGP_CBAJ_G0004975.1 mouse_genomes_project 1 205715489 205723919 - Gm2061 lincRNA lincRNA MGP_CBAJ_T0018697.1 MGP_CBAJ_G0015595.1 mouse_genomes_project 1 14242620 14279207 - MGP_CBAJ_P0018697 Sbspon protein_coding protein_coding MGP_CBAJ_T0018548.1 MGP_CBAJ_G0015570.1 mouse_genomes_project 1 7326414 7351987 + MGP_CBAJ_P0018548 3110035E14Rik protein_coding protein_coding MGP_CBAJ_T0000327.1 MGP_CBAJ_G0000272.1 mouse_genomes_project 1 1574190 1575674 - TEC TEC MGP_CBAJ_T0012019.1 MGP_CBAJ_G0010131.1 mouse_genomes_project 1 107954863 107955577 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002724.1 MGP_CBAJ_G0002589.1 mouse_genomes_project 1 42203626 42212030 - Gm35801 antisense antisense MGP_CBAJ_T0002725.1 MGP_CBAJ_G0002589.1 mouse_genomes_project 1 42203646 42212016 - Gm35801 antisense antisense MGP_CBAJ_T0016743.1 MGP_CBAJ_G0014838.1 mouse_genomes_project 1 67881363 67888633 + Platr12 processed_transcript antisense MGP_CBAJ_T0016744.1 MGP_CBAJ_G0014838.1 mouse_genomes_project 1 67881758 67888986 + Platr12 processed_transcript lincRNA MGP_CBAJ_T0098231.1 MGP_CBAJ_G0036504.1 mouse_genomes_project 1 75061797 75065284 - Gm29112 sense_intronic sense_intronic MGP_CBAJ_T0020765.1 MGP_CBAJ_G0015991.1 mouse_genomes_project 1 93981795 93984584 + MGP_CBAJ_P0020765 protein_coding protein_coding MGP_CBAJ_T0020766.1 MGP_CBAJ_G0015991.1 mouse_genomes_project 1 93981799 93984802 + protein_coding processed_transcript MGP_CBAJ_T0000423.1 MGP_CBAJ_G0000365.1 mouse_genomes_project 1 41651914 41654985 + TEC TEC MGP_CBAJ_T0021046.1 MGP_CBAJ_G0016054.1 mouse_genomes_project 1 99740428 99759043 + MGP_CBAJ_P0021046 Asb1 protein_coding protein_coding MGP_CBAJ_T0021047.1 MGP_CBAJ_G0016054.1 mouse_genomes_project 1 99740451 99746826 + Asb1 protein_coding processed_transcript MGP_CBAJ_T0021048.1 MGP_CBAJ_G0016054.1 mouse_genomes_project 1 99740598 99762544 + MGP_CBAJ_P0021048 Asb1 protein_coding protein_coding MGP_CBAJ_T0021049.1 MGP_CBAJ_G0016054.1 mouse_genomes_project 1 99740616 99757779 + MGP_CBAJ_P0021049 Asb1 protein_coding protein_coding MGP_CBAJ_T0021050.1 MGP_CBAJ_G0016054.1 mouse_genomes_project 1 99740616 99757779 + MGP_CBAJ_P0021050 Asb1 protein_coding protein_coding MGP_CBAJ_T0021051.1 MGP_CBAJ_G0016054.1 mouse_genomes_project 1 99740964 99752654 + MGP_CBAJ_P0021051 Asb1 protein_coding protein_coding MGP_CBAJ_T0021052.1 MGP_CBAJ_G0016054.1 mouse_genomes_project 1 99740964 99758072 + MGP_CBAJ_P0021052 Asb1 protein_coding protein_coding MGP_CBAJ_T0099768.1 MGP_CBAJ_G0038023.1 mouse_genomes_project 1 71352301 71352438 + Gm24729 snoRNA snoRNA MGP_CBAJ_T0023064.1 MGP_CBAJ_G0016479.1 mouse_genomes_project 1 189165043 189174063 - Fcgr3 protein_coding retained_intron MGP_CBAJ_T0023065.1 MGP_CBAJ_G0016479.1 mouse_genomes_project 1 189165044 189180955 - MGP_CBAJ_P0023065 Fcgr3 protein_coding protein_coding MGP_CBAJ_T0023066.1 MGP_CBAJ_G0016479.1 mouse_genomes_project 1 189165124 189180955 - MGP_CBAJ_P0023066 Fcgr3 protein_coding protein_coding MGP_CBAJ_T0023067.1 MGP_CBAJ_G0016479.1 mouse_genomes_project 1 189173836 189221367 - MGP_CBAJ_P0023067 Fcgr3 protein_coding protein_coding MGP_CBAJ_T0018870.1 MGP_CBAJ_G0015638.1 mouse_genomes_project 1 31137867 31217910 - MGP_CBAJ_P0018870 Phf3 protein_coding protein_coding MGP_CBAJ_T0018871.1 MGP_CBAJ_G0015638.1 mouse_genomes_project 1 31137870 31207113 - MGP_CBAJ_P0018871 Phf3 protein_coding protein_coding MGP_CBAJ_T0018872.1 MGP_CBAJ_G0015638.1 mouse_genomes_project 1 31139074 31151535 - MGP_CBAJ_P0018872 Phf3 protein_coding protein_coding MGP_CBAJ_T0018873.1 MGP_CBAJ_G0015638.1 mouse_genomes_project 1 31141718 31149932 - Phf3 protein_coding retained_intron MGP_CBAJ_T0018874.1 MGP_CBAJ_G0015638.1 mouse_genomes_project 1 31152726 31154357 - Phf3 protein_coding retained_intron MGP_CBAJ_T0018875.1 MGP_CBAJ_G0015638.1 mouse_genomes_project 1 31154386 31218020 - Phf3 protein_coding retained_intron MGP_CBAJ_T0018876.1 MGP_CBAJ_G0015638.1 mouse_genomes_project 1 31156109 31218252 - Phf3 protein_coding retained_intron MGP_CBAJ_T0018877.1 MGP_CBAJ_G0015638.1 mouse_genomes_project 1 31160999 31218129 - MGP_CBAJ_P0018877 Phf3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018878.1 MGP_CBAJ_G0015638.1 mouse_genomes_project 1 31161830 31164628 - Phf3 protein_coding retained_intron MGP_CBAJ_T0018879.1 MGP_CBAJ_G0015638.1 mouse_genomes_project 1 31165201 31206927 - Phf3 protein_coding processed_transcript MGP_CBAJ_T0018880.1 MGP_CBAJ_G0015638.1 mouse_genomes_project 1 31170192 31171507 - Phf3 protein_coding retained_intron MGP_CBAJ_T0018881.1 MGP_CBAJ_G0015638.1 mouse_genomes_project 1 31171968 31218225 - MGP_CBAJ_P0018881 Phf3 protein_coding protein_coding MGP_CBAJ_T0018882.1 MGP_CBAJ_G0015638.1 mouse_genomes_project 1 31206926 31217577 - MGP_CBAJ_P0018882 Phf3 protein_coding protein_coding MGP_CBAJ_T0018883.1 MGP_CBAJ_G0015638.1 mouse_genomes_project 1 31216979 31217800 - Phf3 protein_coding retained_intron MGP_CBAJ_T0005705.1 MGP_CBAJ_G0004779.1 mouse_genomes_project 1 79575404 79715537 - 6030407O03Rik lincRNA lincRNA MGP_CBAJ_T0005706.1 MGP_CBAJ_G0004779.1 mouse_genomes_project 1 79575404 79851865 - 6030407O03Rik lincRNA lincRNA MGP_CBAJ_T0005814.1 MGP_CBAJ_G0004869.1 mouse_genomes_project 1 145504982 145507716 - 1700037F24Rik lincRNA lincRNA MGP_CBAJ_T0000452.1 MGP_CBAJ_G0000394.1 mouse_genomes_project 1 65022171 65023601 - TEC TEC MGP_CBAJ_T0011974.1 MGP_CBAJ_G0010086.1 mouse_genomes_project 1 82326060 82326460 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099773.1 MGP_CBAJ_G0038028.1 mouse_genomes_project 1 93471172 93471294 + Gm22786 snoRNA snoRNA MGP_CBAJ_T0005578.1 MGP_CBAJ_G0004690.1 mouse_genomes_project 1 22897287 22921999 + Gm28822 lincRNA lincRNA MGP_CBAJ_T0019993.1 MGP_CBAJ_G0015846.1 mouse_genomes_project 1 70005930 70008000 - MGP_CBAJ_P0019993 Crygb protein_coding protein_coding MGP_CBAJ_T0101237.1 MGP_CBAJ_G0039381.1 mouse_genomes_project 1 16633579 16660298 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101238.1 MGP_CBAJ_G0039381.1 mouse_genomes_project 1 16646838 16659777 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0009369.1 MGP_CBAJ_G0007507.1 mouse_genomes_project 1 50061528 50061633 - Mir6350 miRNA miRNA MGP_CBAJ_T0099819.1 MGP_CBAJ_G0038074.1 mouse_genomes_project 1 180298718 180298852 - Gm22671 snoRNA snoRNA MGP_CBAJ_T0000739.1 MGP_CBAJ_G0000678.1 mouse_genomes_project 1 202367334 202368092 - TEC TEC MGP_CBAJ_T0000740.1 MGP_CBAJ_G0000678.1 mouse_genomes_project 1 202367689 202368091 - TEC TEC MGP_CBAJ_T0009376.1 MGP_CBAJ_G0007514.1 mouse_genomes_project 1 67831147 67831234 + Gm24557 miRNA miRNA MGP_CBAJ_T0000775.1 MGP_CBAJ_G0000712.1 mouse_genomes_project 1 216325106 216327336 - TEC TEC MGP_CBAJ_T0021021.1 MGP_CBAJ_G0016049.1 mouse_genomes_project 1 99555797 99563585 + MGP_CBAJ_P0021021 Fam132b protein_coding protein_coding MGP_CBAJ_T0021022.1 MGP_CBAJ_G0016049.1 mouse_genomes_project 1 99560061 99563460 + MGP_CBAJ_P0021022 Fam132b protein_coding protein_coding MGP_CBAJ_T0011982.1 MGP_CBAJ_G0010094.1 mouse_genomes_project 1 88572753 88573738 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009385.1 MGP_CBAJ_G0007523.1 mouse_genomes_project 1 80653693 80653770 - Gm25035 miRNA miRNA MGP_CBAJ_T0098547.1 MGP_CBAJ_G0036802.1 mouse_genomes_project 1 94921060 94921167 - Gm22549 snRNA snRNA MGP_CBAJ_T0012098.1 MGP_CBAJ_G0010210.1 mouse_genomes_project 1 141604701 141605123 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021368.1 MGP_CBAJ_G0016131.1 mouse_genomes_project 1 129956514 129978872 - MGP_CBAJ_P0021368 Tsn protein_coding protein_coding MGP_CBAJ_T0021369.1 MGP_CBAJ_G0016131.1 mouse_genomes_project 1 129961410 129977694 - Tsn protein_coding retained_intron MGP_CBAJ_T0021370.1 MGP_CBAJ_G0016131.1 mouse_genomes_project 1 129962648 129977443 - Tsn protein_coding retained_intron MGP_CBAJ_T0021371.1 MGP_CBAJ_G0016131.1 mouse_genomes_project 1 129969465 129978918 - Tsn protein_coding processed_transcript MGP_CBAJ_T0021372.1 MGP_CBAJ_G0016131.1 mouse_genomes_project 1 129976163 129978692 - Tsn protein_coding retained_intron MGP_CBAJ_T0021373.1 MGP_CBAJ_G0016131.1 mouse_genomes_project 1 129978136 129979209 - Tsn protein_coding retained_intron MGP_CBAJ_T0100996.1 MGP_CBAJ_G0039247.1 mouse_genomes_project 1 126933216 126952064 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0100997.1 MGP_CBAJ_G0039247.1 mouse_genomes_project 1 126933631 126934818 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0100998.1 MGP_CBAJ_G0039247.1 mouse_genomes_project 1 126934059 126952069 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0022377.1 MGP_CBAJ_G0016339.1 mouse_genomes_project 1 169564401 169620393 - MGP_CBAJ_P0022377 Npl protein_coding protein_coding MGP_CBAJ_T0022378.1 MGP_CBAJ_G0016339.1 mouse_genomes_project 1 169564759 169615671 - MGP_CBAJ_P0022378 Npl protein_coding unknown_likely_coding MGP_CBAJ_T0022379.1 MGP_CBAJ_G0016339.1 mouse_genomes_project 1 169618769 169620059 - Npl protein_coding retained_intron MGP_CBAJ_T0011730.1 MGP_CBAJ_G0009842.1 mouse_genomes_project 1 3417294 3418377 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0021313.1 MGP_CBAJ_G0016111.1 mouse_genomes_project 1 116710668 116904122 - MGP_CBAJ_P0021313 Bcl2 protein_coding protein_coding MGP_CBAJ_T0021314.1 MGP_CBAJ_G0016111.1 mouse_genomes_project 1 116900193 116903027 - MGP_CBAJ_P0021314 Bcl2 protein_coding protein_coding MGP_CBAJ_T0002851.1 MGP_CBAJ_G0002684.1 mouse_genomes_project 1 172635822 172637218 + 4930518J20Rik antisense antisense MGP_CBAJ_T0098516.1 MGP_CBAJ_G0036771.1 mouse_genomes_project 1 24825019 24825126 - Gm22260 snRNA snRNA MGP_CBAJ_T0000325.1 MGP_CBAJ_G0000270.1 mouse_genomes_project 1 777829 779463 + TEC TEC MGP_CBAJ_T0012135.1 MGP_CBAJ_G0010247.1 mouse_genomes_project 1 164450001 164450472 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0020687.1 MGP_CBAJ_G0015972.1 mouse_genomes_project 1 92098893 92129861 - MGP_CBAJ_P0020687 Slc16a14 protein_coding protein_coding MGP_CBAJ_T0020688.1 MGP_CBAJ_G0015972.1 mouse_genomes_project 1 92124230 92129584 - MGP_CBAJ_P0020688 Slc16a14 protein_coding protein_coding MGP_CBAJ_T0022160.1 MGP_CBAJ_G0016299.1 mouse_genomes_project 1 154054341 154109658 - MGP_CBAJ_P0022160 protein_coding protein_coding MGP_CBAJ_T0022161.1 MGP_CBAJ_G0016299.1 mouse_genomes_project 1 154061707 154109670 - MGP_CBAJ_P0022161 protein_coding protein_coding MGP_CBAJ_T0005732.1 MGP_CBAJ_G0004800.1 mouse_genomes_project 1 94687890 94692000 - Gm29374 lincRNA lincRNA MGP_CBAJ_T0009364.1 MGP_CBAJ_G0007502.1 mouse_genomes_project 1 37777633 37777708 + Gm24133 miRNA miRNA MGP_CBAJ_T0009359.1 MGP_CBAJ_G0007497.1 mouse_genomes_project 1 34917439 34917512 + Mir6896 miRNA miRNA MGP_CBAJ_T0000444.1 MGP_CBAJ_G0000386.1 mouse_genomes_project 1 60809473 60811311 + TEC TEC MGP_CBAJ_T0002836.1 MGP_CBAJ_G0002673.1 mouse_genomes_project 1 154906571 155008368 - 4930590L20Rik antisense antisense MGP_CBAJ_T0011959.1 MGP_CBAJ_G0010071.1 mouse_genomes_project 1 74562747 74563133 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005913.1 MGP_CBAJ_G0004950.1 mouse_genomes_project 1 199792278 199803156 - Gm37336 lincRNA lincRNA MGP_CBAJ_T0005914.1 MGP_CBAJ_G0004950.1 mouse_genomes_project 1 199802753 199803207 - Gm37336 lincRNA lincRNA MGP_CBAJ_T0002894.1 MGP_CBAJ_G0002719.1 mouse_genomes_project 1 197700097 197703161 - antisense antisense MGP_CBAJ_T0012082.1 MGP_CBAJ_G0010194.1 mouse_genomes_project 1 133690990 133691173 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0021874.1 MGP_CBAJ_G0016238.1 mouse_genomes_project 1 147607730 147622383 + MGP_CBAJ_P0021874 Fmod protein_coding protein_coding MGP_CBAJ_T0021875.1 MGP_CBAJ_G0016238.1 mouse_genomes_project 1 147607972 147610952 + MGP_CBAJ_P0021875 Fmod protein_coding protein_coding MGP_CBAJ_T0011897.1 MGP_CBAJ_G0010009.1 mouse_genomes_project 1 55663213 55663676 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000703.1 MGP_CBAJ_G0000643.1 mouse_genomes_project 1 186524451 186525062 - TEC TEC MGP_CBAJ_T0012044.1 MGP_CBAJ_G0010156.1 mouse_genomes_project 1 118300521 118300707 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098251.1 MGP_CBAJ_G0036523.1 mouse_genomes_project 1 207569702 207573172 - Gm15509 sense_intronic sense_intronic MGP_CBAJ_T0000351.1 MGP_CBAJ_G0000296.1 mouse_genomes_project 1 11482201 11486774 - TEC TEC MGP_CBAJ_T0000639.1 MGP_CBAJ_G0000579.1 mouse_genomes_project 1 162770524 162774683 + TEC TEC MGP_CBAJ_T0023737.1 MGP_CBAJ_G0016641.1 mouse_genomes_project 1 204105683 204138093 + MGP_CBAJ_P0023737 Dusp10 protein_coding protein_coding MGP_CBAJ_T0023740.1 MGP_CBAJ_G0016641.1 mouse_genomes_project 1 204133433 204184897 + MGP_CBAJ_P0023740 Dusp10 protein_coding protein_coding MGP_CBAJ_T0005898.1 MGP_CBAJ_G0004936.1 mouse_genomes_project 1 184644967 184647551 - Gm16701 lincRNA lincRNA MGP_CBAJ_T0021018.1 MGP_CBAJ_G0016047.1 mouse_genomes_project 1 99509541 99535411 + MGP_CBAJ_P0021018 Espnl protein_coding protein_coding MGP_CBAJ_T0021019.1 MGP_CBAJ_G0016047.1 mouse_genomes_project 1 99509599 99533041 + MGP_CBAJ_P0021019 Espnl protein_coding protein_coding MGP_CBAJ_T0020306.1 MGP_CBAJ_G0015906.1 mouse_genomes_project 1 80961690 80964489 + MGP_CBAJ_P0020306 Cdk5r2 protein_coding protein_coding MGP_CBAJ_T0019313.1 MGP_CBAJ_G0015723.1 mouse_genomes_project 1 45468196 45562380 + MGP_CBAJ_P0019313 Nck2 protein_coding protein_coding MGP_CBAJ_T0019314.1 MGP_CBAJ_G0015723.1 mouse_genomes_project 1 45469368 45490110 + Nck2 protein_coding processed_transcript MGP_CBAJ_T0019315.1 MGP_CBAJ_G0015723.1 mouse_genomes_project 1 45469368 45605246 + MGP_CBAJ_P0019315 Nck2 protein_coding protein_coding MGP_CBAJ_T0019316.1 MGP_CBAJ_G0015723.1 mouse_genomes_project 1 45484528 45490138 + Nck2 protein_coding processed_transcript MGP_CBAJ_T0019317.1 MGP_CBAJ_G0015723.1 mouse_genomes_project 1 45561152 45584314 + MGP_CBAJ_P0019317 Nck2 protein_coding protein_coding MGP_CBAJ_T0019318.1 MGP_CBAJ_G0015723.1 mouse_genomes_project 1 45562316 45601837 + MGP_CBAJ_P0019318 Nck2 protein_coding protein_coding MGP_CBAJ_T0019080.1 MGP_CBAJ_G0015675.1 mouse_genomes_project 1 37892736 37920591 + MGP_CBAJ_P0019080 Zap70 protein_coding protein_coding MGP_CBAJ_T0019081.1 MGP_CBAJ_G0015675.1 mouse_genomes_project 1 37897872 37902066 + MGP_CBAJ_P0019081 Zap70 protein_coding protein_coding MGP_CBAJ_T0019082.1 MGP_CBAJ_G0015675.1 mouse_genomes_project 1 37901990 37903375 + Zap70 protein_coding retained_intron MGP_CBAJ_T0019083.1 MGP_CBAJ_G0015675.1 mouse_genomes_project 1 37913621 37920588 + Zap70 protein_coding retained_intron MGP_CBAJ_T0101009.1 MGP_CBAJ_G0039252.1 mouse_genomes_project 1 202527437 202528371 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101010.1 MGP_CBAJ_G0039252.1 mouse_genomes_project 1 202527859 202538906 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0000506.1 MGP_CBAJ_G0000448.1 mouse_genomes_project 1 90472600 90473403 - TEC TEC MGP_CBAJ_T0000400.1 MGP_CBAJ_G0000343.1 mouse_genomes_project 1 34413735 34414624 + TEC TEC MGP_CBAJ_T0000401.1 MGP_CBAJ_G0000343.1 mouse_genomes_project 1 34413754 34414624 + TEC TEC MGP_CBAJ_T0018968.1 MGP_CBAJ_G0015654.1 mouse_genomes_project 1 35406739 35424358 + MGP_CBAJ_P0018968 Cfc1 protein_coding protein_coding MGP_CBAJ_T0011749.1 MGP_CBAJ_G0009861.1 mouse_genomes_project 1 6494038 6494378 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0018757.1 MGP_CBAJ_G0015607.1 mouse_genomes_project 1 16302477 16345346 + MGP_CBAJ_P0018757 Crispld1 protein_coding protein_coding MGP_CBAJ_T0018758.1 MGP_CBAJ_G0015607.1 mouse_genomes_project 1 16302491 16321391 + MGP_CBAJ_P0018758 Crispld1 protein_coding protein_coding MGP_CBAJ_T0018759.1 MGP_CBAJ_G0015607.1 mouse_genomes_project 1 16302520 16346115 + MGP_CBAJ_P0018759 Crispld1 protein_coding protein_coding MGP_CBAJ_T0021222.1 MGP_CBAJ_G0016090.1 mouse_genomes_project 1 102296907 102315043 + MGP_CBAJ_P0021222 Ing5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021223.1 MGP_CBAJ_G0016090.1 mouse_genomes_project 1 102296927 102311266 + MGP_CBAJ_P0021223 Ing5 protein_coding protein_coding MGP_CBAJ_T0011757.1 MGP_CBAJ_G0009869.1 mouse_genomes_project 1 7527142 7527499 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000438.1 MGP_CBAJ_G0000380.1 mouse_genomes_project 1 58032984 58036221 - TEC TEC MGP_CBAJ_T0005942.1 MGP_CBAJ_G0004968.1 mouse_genomes_project 1 204666625 204706824 - 1700112H15Rik lincRNA lincRNA MGP_CBAJ_T0011828.1 MGP_CBAJ_G0009940.1 mouse_genomes_project 1 34022056 34022967 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023320.1 MGP_CBAJ_G0016532.1 mouse_genomes_project 1 190956591 190967834 - MGP_CBAJ_P0023320 Fcrl6 protein_coding protein_coding MGP_CBAJ_T0023321.1 MGP_CBAJ_G0016532.1 mouse_genomes_project 1 190957498 190967830 - Fcrl6 protein_coding retained_intron MGP_CBAJ_T0023322.1 MGP_CBAJ_G0016532.1 mouse_genomes_project 1 190957937 190967834 - Fcrl6 protein_coding retained_intron MGP_CBAJ_T0000555.1 MGP_CBAJ_G0000497.1 mouse_genomes_project 1 131446222 131447148 - TEC TEC MGP_CBAJ_T0019981.1 MGP_CBAJ_G0015842.1 mouse_genomes_project 1 69920897 69948821 - MGP_CBAJ_P0019981 Akr1cl protein_coding protein_coding MGP_CBAJ_T0019982.1 MGP_CBAJ_G0015842.1 mouse_genomes_project 1 69920897 69948833 - MGP_CBAJ_P0019982 Akr1cl protein_coding protein_coding MGP_CBAJ_T0019983.1 MGP_CBAJ_G0015842.1 mouse_genomes_project 1 69922681 69924755 - Akr1cl protein_coding retained_intron MGP_CBAJ_T0019984.1 MGP_CBAJ_G0015842.1 mouse_genomes_project 1 69924279 69948760 - MGP_CBAJ_P0019984 Akr1cl protein_coding nonsense_mediated_decay MGP_CBAJ_T0019985.1 MGP_CBAJ_G0015842.1 mouse_genomes_project 1 69941025 69948806 - Akr1cl protein_coding processed_transcript MGP_CBAJ_T0019986.1 MGP_CBAJ_G0015842.1 mouse_genomes_project 1 69942864 69948822 - Akr1cl protein_coding retained_intron MGP_CBAJ_T0023002.1 MGP_CBAJ_G0016462.1 mouse_genomes_project 1 187884218 187890645 + MGP_CBAJ_P0023002 Ccdc190 protein_coding protein_coding MGP_CBAJ_T0023003.1 MGP_CBAJ_G0016462.1 mouse_genomes_project 1 187885499 187890405 + MGP_CBAJ_P0023003 Ccdc190 protein_coding protein_coding MGP_CBAJ_T0019693.1 MGP_CBAJ_G0015793.1 mouse_genomes_project 1 62422613 62441517 - MGP_CBAJ_P0019693 Ppil3 protein_coding protein_coding MGP_CBAJ_T0019694.1 MGP_CBAJ_G0015793.1 mouse_genomes_project 1 62422613 62441512 - MGP_CBAJ_P0019694 Ppil3 protein_coding protein_coding MGP_CBAJ_T0019695.1 MGP_CBAJ_G0015793.1 mouse_genomes_project 1 62422616 62441569 - MGP_CBAJ_P0019695 Ppil3 protein_coding protein_coding MGP_CBAJ_T0019696.1 MGP_CBAJ_G0015793.1 mouse_genomes_project 1 62422637 62423802 - Ppil3 protein_coding processed_transcript MGP_CBAJ_T0019697.1 MGP_CBAJ_G0015793.1 mouse_genomes_project 1 62425402 62441452 - MGP_CBAJ_P0019697 Ppil3 protein_coding protein_coding MGP_CBAJ_T0019698.1 MGP_CBAJ_G0015793.1 mouse_genomes_project 1 62426030 62441522 - MGP_CBAJ_P0019698 Ppil3 protein_coding protein_coding MGP_CBAJ_T0019699.1 MGP_CBAJ_G0015793.1 mouse_genomes_project 1 62426034 62441565 - MGP_CBAJ_P0019699 Ppil3 protein_coding protein_coding MGP_CBAJ_T0019700.1 MGP_CBAJ_G0015793.1 mouse_genomes_project 1 62434406 62441259 - Ppil3 protein_coding retained_intron MGP_CBAJ_T0019701.1 MGP_CBAJ_G0015793.1 mouse_genomes_project 1 62435060 62437211 - Ppil3 protein_coding retained_intron MGP_CBAJ_T0021646.1 MGP_CBAJ_G0016188.1 mouse_genomes_project 1 144228493 144233627 + MGP_CBAJ_P0021646 Il10 protein_coding protein_coding MGP_CBAJ_T0005879.1 MGP_CBAJ_G0004920.1 mouse_genomes_project 1 180906308 180909209 + Gm29500 lincRNA lincRNA MGP_CBAJ_T0011848.1 MGP_CBAJ_G0009960.1 mouse_genomes_project 1 40072222 40072724 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011964.1 MGP_CBAJ_G0010076.1 mouse_genomes_project 1 77414044 77414395 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0020216.1 MGP_CBAJ_G0015891.1 mouse_genomes_project 1 80417157 80428354 + MGP_CBAJ_P0020216 Slc11a1 protein_coding protein_coding MGP_CBAJ_T0020217.1 MGP_CBAJ_G0015891.1 mouse_genomes_project 1 80417165 80428651 + Slc11a1 protein_coding retained_intron MGP_CBAJ_T0020218.1 MGP_CBAJ_G0015891.1 mouse_genomes_project 1 80417165 80428663 + MGP_CBAJ_P0020218 Slc11a1 protein_coding protein_coding MGP_CBAJ_T0020219.1 MGP_CBAJ_G0015891.1 mouse_genomes_project 1 80417187 80428650 + Slc11a1 protein_coding retained_intron MGP_CBAJ_T0020220.1 MGP_CBAJ_G0015891.1 mouse_genomes_project 1 80417215 80424314 + Slc11a1 protein_coding processed_transcript MGP_CBAJ_T0020221.1 MGP_CBAJ_G0015891.1 mouse_genomes_project 1 80417534 80418853 + Slc11a1 protein_coding processed_transcript MGP_CBAJ_T0020222.1 MGP_CBAJ_G0015891.1 mouse_genomes_project 1 80418619 80421863 + Slc11a1 protein_coding processed_transcript MGP_CBAJ_T0020223.1 MGP_CBAJ_G0015891.1 mouse_genomes_project 1 80424138 80426669 + Slc11a1 protein_coding retained_intron MGP_CBAJ_T0020224.1 MGP_CBAJ_G0015891.1 mouse_genomes_project 1 80425529 80426330 + Slc11a1 protein_coding retained_intron MGP_CBAJ_T0020225.1 MGP_CBAJ_G0015891.1 mouse_genomes_project 1 80425836 80426669 + Slc11a1 protein_coding processed_transcript MGP_CBAJ_T0020226.1 MGP_CBAJ_G0015891.1 mouse_genomes_project 1 80426095 80427796 + Slc11a1 protein_coding processed_transcript MGP_CBAJ_T0099806.1 MGP_CBAJ_G0038061.1 mouse_genomes_project 1 176819472 176819582 - Gm24719 snoRNA snoRNA MGP_CBAJ_T0011737.1 MGP_CBAJ_G0009849.1 mouse_genomes_project 1 4532258 4533561 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0023041.1 MGP_CBAJ_G0016473.1 mouse_genomes_project 1 188952411 188966330 - MGP_CBAJ_P0023041 Dusp12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023042.1 MGP_CBAJ_G0016473.1 mouse_genomes_project 1 188953154 188966413 - MGP_CBAJ_P0023042 Dusp12 protein_coding protein_coding MGP_CBAJ_T0023043.1 MGP_CBAJ_G0016473.1 mouse_genomes_project 1 188953154 188966072 - MGP_CBAJ_P0023043 Dusp12 protein_coding protein_coding MGP_CBAJ_T0023044.1 MGP_CBAJ_G0016473.1 mouse_genomes_project 1 188953154 188966268 - MGP_CBAJ_P0023044 Dusp12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023045.1 MGP_CBAJ_G0016473.1 mouse_genomes_project 1 188953155 188966280 - MGP_CBAJ_P0023045 Dusp12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023046.1 MGP_CBAJ_G0016473.1 mouse_genomes_project 1 188953486 188966269 - MGP_CBAJ_P0023046 Dusp12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023047.1 MGP_CBAJ_G0016473.1 mouse_genomes_project 1 188959734 188965877 - MGP_CBAJ_P0023047 Dusp12 protein_coding protein_coding MGP_CBAJ_T0005970.1 MGP_CBAJ_G0004991.1 mouse_genomes_project 1 212460733 212463717 - Gm37432 lincRNA lincRNA MGP_CBAJ_T0011986.1 MGP_CBAJ_G0010098.1 mouse_genomes_project 1 89998524 89999950 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0020767.1 MGP_CBAJ_G0015992.1 mouse_genomes_project 1 94001086 94048189 - Pde6d protein_coding retained_intron MGP_CBAJ_T0020768.1 MGP_CBAJ_G0015992.1 mouse_genomes_project 1 94001086 94048189 - MGP_CBAJ_P0020768 Pde6d protein_coding protein_coding MGP_CBAJ_T0020769.1 MGP_CBAJ_G0015992.1 mouse_genomes_project 1 94001114 94048271 - MGP_CBAJ_P0020769 Pde6d protein_coding nonsense_mediated_decay MGP_CBAJ_T0020770.1 MGP_CBAJ_G0015992.1 mouse_genomes_project 1 94001612 94048159 - Pde6d protein_coding processed_transcript MGP_CBAJ_T0020771.1 MGP_CBAJ_G0015992.1 mouse_genomes_project 1 94003484 94048189 - MGP_CBAJ_P0020771 Pde6d protein_coding protein_coding MGP_CBAJ_T0099744.1 MGP_CBAJ_G0037999.1 mouse_genomes_project 1 23976712 23976849 - Gm26418 snoRNA snoRNA MGP_CBAJ_T0000649.1 MGP_CBAJ_G0000589.1 mouse_genomes_project 1 168914478 168914916 + TEC TEC MGP_CBAJ_T0000600.1 MGP_CBAJ_G0000541.1 mouse_genomes_project 1 147311614 147314811 - TEC TEC MGP_CBAJ_T0098152.1 MGP_CBAJ_G0036425.1 mouse_genomes_project 1 48058891 48059094 + Gm23984 ribozyme ribozyme MGP_CBAJ_T0005812.1 MGP_CBAJ_G0004867.1 mouse_genomes_project 1 143965973 143983915 + Gm28856 lincRNA lincRNA MGP_CBAJ_T0005818.1 MGP_CBAJ_G0004873.1 mouse_genomes_project 1 147377240 147380804 + Gm28441 lincRNA lincRNA MGP_CBAJ_T0019174.1 MGP_CBAJ_G0015691.1 mouse_genomes_project 1 39305992 39366294 + MGP_CBAJ_P0019174 Eif5b protein_coding protein_coding MGP_CBAJ_T0019175.1 MGP_CBAJ_G0015691.1 mouse_genomes_project 1 39306111 39362736 + Eif5b protein_coding retained_intron MGP_CBAJ_T0019176.1 MGP_CBAJ_G0015691.1 mouse_genomes_project 1 39352498 39356176 + Eif5b protein_coding retained_intron MGP_CBAJ_T0019177.1 MGP_CBAJ_G0015691.1 mouse_genomes_project 1 39353575 39357412 + Eif5b protein_coding processed_transcript MGP_CBAJ_T0019178.1 MGP_CBAJ_G0015691.1 mouse_genomes_project 1 39355369 39359539 + Eif5b protein_coding retained_intron MGP_CBAJ_T0012066.1 MGP_CBAJ_G0010178.1 mouse_genomes_project 1 129034137 129034611 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098544.1 MGP_CBAJ_G0036799.1 mouse_genomes_project 1 80218306 80218413 + Gm25524 snRNA snRNA MGP_CBAJ_T0011136.1 MGP_CBAJ_G0009274.1 mouse_genomes_project 1 211310449 211310762 - Gm23153 misc_RNA misc_RNA MGP_CBAJ_T0016760.1 MGP_CBAJ_G0014846.1 mouse_genomes_project 1 97979361 97980990 + D130058E05Rik processed_transcript antisense MGP_CBAJ_T0016761.1 MGP_CBAJ_G0014846.1 mouse_genomes_project 1 97979388 97982418 + D130058E05Rik processed_transcript retained_intron MGP_CBAJ_T0019231.1 MGP_CBAJ_G0015703.1 mouse_genomes_project 1 41121403 41162025 - MGP_CBAJ_P0019231 Creg2 protein_coding protein_coding MGP_CBAJ_T0009446.1 MGP_CBAJ_G0007584.1 mouse_genomes_project 1 213040583 213040664 - Mir3473c miRNA miRNA MGP_CBAJ_T0023383.1 MGP_CBAJ_G0016569.1 mouse_genomes_project 1 193371611 193768605 + MGP_CBAJ_P0023383 Fmn2 protein_coding protein_coding MGP_CBAJ_T0023384.1 MGP_CBAJ_G0016569.1 mouse_genomes_project 1 193415989 193474204 + Fmn2 protein_coding processed_transcript MGP_CBAJ_T0023385.1 MGP_CBAJ_G0016569.1 mouse_genomes_project 1 193506340 193513089 + Fmn2 protein_coding processed_transcript MGP_CBAJ_T0023386.1 MGP_CBAJ_G0016569.1 mouse_genomes_project 1 193506341 193611395 + MGP_CBAJ_P0023386 Fmn2 protein_coding protein_coding MGP_CBAJ_T0023387.1 MGP_CBAJ_G0016569.1 mouse_genomes_project 1 193510018 193619680 + Fmn2 protein_coding retained_intron MGP_CBAJ_T0023388.1 MGP_CBAJ_G0016569.1 mouse_genomes_project 1 193627398 193767151 + Fmn2 protein_coding processed_transcript MGP_CBAJ_T0002919.1 MGP_CBAJ_G0002741.1 mouse_genomes_project 1 211918310 211919147 + A230020J21Rik antisense antisense MGP_CBAJ_T0002920.1 MGP_CBAJ_G0002741.1 mouse_genomes_project 1 211918311 211922724 + A230020J21Rik antisense antisense MGP_CBAJ_T0018893.1 MGP_CBAJ_G0015642.1 mouse_genomes_project 1 31649141 31650580 + MGP_CBAJ_P0018893 Pih1d3 protein_coding protein_coding MGP_CBAJ_T0023741.1 MGP_CBAJ_G0016643.1 mouse_genomes_project 1 204904174 204910715 - MGP_CBAJ_P0023741 Hlx protein_coding protein_coding MGP_CBAJ_T0023742.1 MGP_CBAJ_G0016643.1 mouse_genomes_project 1 204904181 204909713 - MGP_CBAJ_P0023742 Hlx protein_coding protein_coding MGP_CBAJ_T0023689.1 MGP_CBAJ_G0016631.1 mouse_genomes_project 1 202550734 202595349 + Capn8 protein_coding processed_transcript MGP_CBAJ_T0023690.1 MGP_CBAJ_G0016631.1 mouse_genomes_project 1 202550739 202624697 + MGP_CBAJ_P0023690 Capn8 protein_coding protein_coding MGP_CBAJ_T0023691.1 MGP_CBAJ_G0016631.1 mouse_genomes_project 1 202550765 202624585 + MGP_CBAJ_P0023691 Capn8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018756.1 MGP_CBAJ_G0015606.1 mouse_genomes_project 1 16169160 16208394 + MGP_CBAJ_P0018756 Pi15 protein_coding protein_coding MGP_CBAJ_T0012202.1 MGP_CBAJ_G0010314.1 mouse_genomes_project 1 198203489 198203963 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005843.1 MGP_CBAJ_G0004893.1 mouse_genomes_project 1 153634683 153640188 + Gm34816 lincRNA lincRNA MGP_CBAJ_T0100990.1 MGP_CBAJ_G0039244.1 mouse_genomes_project 1 37895801 37896111 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0100991.1 MGP_CBAJ_G0039244.1 mouse_genomes_project 1 37895956 37896813 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0002676.1 MGP_CBAJ_G0002556.1 mouse_genomes_project 1 2266563 2271105 + Gm16041 antisense antisense MGP_CBAJ_T0023153.1 MGP_CBAJ_G0016494.1 mouse_genomes_project 1 189517374 189535608 + MGP_CBAJ_P0023153 Dedd protein_coding protein_coding MGP_CBAJ_T0023154.1 MGP_CBAJ_G0016494.1 mouse_genomes_project 1 189517628 189535602 + MGP_CBAJ_P0023154 Dedd protein_coding protein_coding MGP_CBAJ_T0023155.1 MGP_CBAJ_G0016494.1 mouse_genomes_project 1 189517637 189534963 + MGP_CBAJ_P0023155 Dedd protein_coding protein_coding MGP_CBAJ_T0023156.1 MGP_CBAJ_G0016494.1 mouse_genomes_project 1 189517795 189533576 + MGP_CBAJ_P0023156 Dedd protein_coding protein_coding MGP_CBAJ_T0023157.1 MGP_CBAJ_G0016494.1 mouse_genomes_project 1 189517836 189534231 + MGP_CBAJ_P0023157 Dedd protein_coding protein_coding MGP_CBAJ_T0023158.1 MGP_CBAJ_G0016494.1 mouse_genomes_project 1 189520097 189531691 + MGP_CBAJ_P0023158 Dedd protein_coding protein_coding MGP_CBAJ_T0023159.1 MGP_CBAJ_G0016494.1 mouse_genomes_project 1 189520374 189531620 + MGP_CBAJ_P0023159 Dedd protein_coding protein_coding MGP_CBAJ_T0023160.1 MGP_CBAJ_G0016494.1 mouse_genomes_project 1 189521432 189534897 + MGP_CBAJ_P0023160 Dedd protein_coding protein_coding MGP_CBAJ_T0023161.1 MGP_CBAJ_G0016494.1 mouse_genomes_project 1 189530090 189533413 + Dedd protein_coding retained_intron MGP_CBAJ_T0023162.1 MGP_CBAJ_G0016494.1 mouse_genomes_project 1 189531264 189533506 + MGP_CBAJ_P0023162 Dedd protein_coding protein_coding MGP_CBAJ_T0012064.1 MGP_CBAJ_G0010176.1 mouse_genomes_project 1 128005277 128005672 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098581.1 MGP_CBAJ_G0036836.1 mouse_genomes_project 1 187732236 187732343 - Gm22114 snRNA snRNA MGP_CBAJ_T0021487.1 MGP_CBAJ_G0016153.1 mouse_genomes_project 1 133540047 133566911 - MGP_CBAJ_P0021487 Htr5b protein_coding protein_coding MGP_CBAJ_T0009438.1 MGP_CBAJ_G0007576.1 mouse_genomes_project 1 195951395 195951475 + Gm25993 miRNA miRNA MGP_CBAJ_T0099740.1 MGP_CBAJ_G0037995.1 mouse_genomes_project 1 18320270 18320335 - Gm24633 snoRNA snoRNA MGP_CBAJ_T0020708.1 MGP_CBAJ_G0015978.1 mouse_genomes_project 1 93246971 93264019 + MGP_CBAJ_P0020708 Itm2c protein_coding protein_coding MGP_CBAJ_T0020709.1 MGP_CBAJ_G0015978.1 mouse_genomes_project 1 93247309 93264033 + MGP_CBAJ_P0020709 Itm2c protein_coding protein_coding MGP_CBAJ_T0020710.1 MGP_CBAJ_G0015978.1 mouse_genomes_project 1 93261504 93263135 + Itm2c protein_coding retained_intron MGP_CBAJ_T0019084.1 MGP_CBAJ_G0015676.1 mouse_genomes_project 1 37933844 38091874 - MGP_CBAJ_P0019084 Tmem131 protein_coding protein_coding MGP_CBAJ_T0019085.1 MGP_CBAJ_G0015676.1 mouse_genomes_project 1 37933847 38092169 - MGP_CBAJ_P0019085 Tmem131 protein_coding protein_coding MGP_CBAJ_T0019086.1 MGP_CBAJ_G0015676.1 mouse_genomes_project 1 37942639 37961647 - Tmem131 protein_coding retained_intron MGP_CBAJ_T0019087.1 MGP_CBAJ_G0015676.1 mouse_genomes_project 1 37953126 37955118 - Tmem131 protein_coding retained_intron MGP_CBAJ_T0019088.1 MGP_CBAJ_G0015676.1 mouse_genomes_project 1 37958715 37966097 - MGP_CBAJ_P0019088 Tmem131 protein_coding protein_coding MGP_CBAJ_T0019089.1 MGP_CBAJ_G0015676.1 mouse_genomes_project 1 37960483 37966488 - MGP_CBAJ_P0019089 Tmem131 protein_coding protein_coding MGP_CBAJ_T0019090.1 MGP_CBAJ_G0015676.1 mouse_genomes_project 1 37965995 37971955 - MGP_CBAJ_P0019090 Tmem131 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019091.1 MGP_CBAJ_G0015676.1 mouse_genomes_project 1 37991160 38096015 - MGP_CBAJ_P0019091 Tmem131 protein_coding protein_coding MGP_CBAJ_T0021732.1 MGP_CBAJ_G0016207.1 mouse_genomes_project 1 145399083 145431142 - MGP_CBAJ_P0021732 Cdk18 protein_coding protein_coding MGP_CBAJ_T0021733.1 MGP_CBAJ_G0016207.1 mouse_genomes_project 1 145401432 145403760 - Cdk18 protein_coding retained_intron MGP_CBAJ_T0021734.1 MGP_CBAJ_G0016207.1 mouse_genomes_project 1 145401610 145431063 - MGP_CBAJ_P0021734 Cdk18 protein_coding protein_coding MGP_CBAJ_T0021735.1 MGP_CBAJ_G0016207.1 mouse_genomes_project 1 145401677 145403537 - MGP_CBAJ_P0021735 Cdk18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021736.1 MGP_CBAJ_G0016207.1 mouse_genomes_project 1 145401780 145403102 - Cdk18 protein_coding retained_intron MGP_CBAJ_T0019702.1 MGP_CBAJ_G0015794.1 mouse_genomes_project 1 62441233 62459251 + MGP_CBAJ_P0019702 Nif3l1 protein_coding protein_coding MGP_CBAJ_T0019703.1 MGP_CBAJ_G0015794.1 mouse_genomes_project 1 62441349 62484473 + MGP_CBAJ_P0019703 Nif3l1 protein_coding protein_coding MGP_CBAJ_T0019704.1 MGP_CBAJ_G0015794.1 mouse_genomes_project 1 62441710 62446558 + MGP_CBAJ_P0019704 Nif3l1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019705.1 MGP_CBAJ_G0015794.1 mouse_genomes_project 1 62441811 62444104 + MGP_CBAJ_P0019705 Nif3l1 protein_coding protein_coding MGP_CBAJ_T0019706.1 MGP_CBAJ_G0015794.1 mouse_genomes_project 1 62443684 62458060 + MGP_CBAJ_P0019706 Nif3l1 protein_coding protein_coding MGP_CBAJ_T0019707.1 MGP_CBAJ_G0015794.1 mouse_genomes_project 1 62445217 62453589 + Nif3l1 protein_coding retained_intron MGP_CBAJ_T0019708.1 MGP_CBAJ_G0015794.1 mouse_genomes_project 1 62449242 62451980 + Nif3l1 protein_coding retained_intron MGP_CBAJ_T0019709.1 MGP_CBAJ_G0015794.1 mouse_genomes_project 1 62453473 62457178 + Nif3l1 protein_coding retained_intron MGP_CBAJ_T0011943.1 MGP_CBAJ_G0010055.1 mouse_genomes_project 1 68633428 68634180 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000751.1 MGP_CBAJ_G0000689.1 mouse_genomes_project 1 207534984 207537984 - TEC TEC MGP_CBAJ_T0012016.1 MGP_CBAJ_G0010128.1 mouse_genomes_project 1 106033724 106034688 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000686.1 MGP_CBAJ_G0000626.1 mouse_genomes_project 1 177953401 177954569 + TEC TEC MGP_CBAJ_T0023601.1 MGP_CBAJ_G0016612.1 mouse_genomes_project 1 200581003 200586999 + MGP_CBAJ_P0023601 Lefty2 protein_coding protein_coding MGP_CBAJ_T0023602.1 MGP_CBAJ_G0016612.1 mouse_genomes_project 1 200582353 200585383 + Lefty2 protein_coding retained_intron MGP_CBAJ_T0012041.1 MGP_CBAJ_G0010153.1 mouse_genomes_project 1 116591782 116592053 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097879.1 MGP_CBAJ_G0036152.1 mouse_genomes_project 1 153037722 153037838 - n-R5s217 rRNA rRNA MGP_CBAJ_T0012125.1 MGP_CBAJ_G0010237.1 mouse_genomes_project 1 159055134 159056805 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000702.1 MGP_CBAJ_G0000642.1 mouse_genomes_project 1 186169127 186171402 - TEC TEC MGP_CBAJ_T0009365.1 MGP_CBAJ_G0007503.1 mouse_genomes_project 1 40633245 40633342 - Mir6349 miRNA miRNA MGP_CBAJ_T0022476.1 MGP_CBAJ_G0016359.1 mouse_genomes_project 1 172333535 172366944 - MGP_CBAJ_P0022476 Tor1aip1 protein_coding protein_coding MGP_CBAJ_T0022477.1 MGP_CBAJ_G0016359.1 mouse_genomes_project 1 172333550 172368548 - MGP_CBAJ_P0022477 Tor1aip1 protein_coding protein_coding MGP_CBAJ_T0022478.1 MGP_CBAJ_G0016359.1 mouse_genomes_project 1 172335740 172368601 - MGP_CBAJ_P0022478 Tor1aip1 protein_coding protein_coding MGP_CBAJ_T0022479.1 MGP_CBAJ_G0016359.1 mouse_genomes_project 1 172336490 172365079 - MGP_CBAJ_P0022479 Tor1aip1 protein_coding protein_coding MGP_CBAJ_T0022480.1 MGP_CBAJ_G0016359.1 mouse_genomes_project 1 172336531 172367007 - MGP_CBAJ_P0022480 Tor1aip1 protein_coding protein_coding MGP_CBAJ_T0022481.1 MGP_CBAJ_G0016359.1 mouse_genomes_project 1 172336531 172368601 - MGP_CBAJ_P0022481 Tor1aip1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022482.1 MGP_CBAJ_G0016359.1 mouse_genomes_project 1 172349403 172350661 - Tor1aip1 protein_coding retained_intron MGP_CBAJ_T0022483.1 MGP_CBAJ_G0016359.1 mouse_genomes_project 1 172350288 172368356 - MGP_CBAJ_P0022483 Tor1aip1 protein_coding unknown_likely_coding MGP_CBAJ_T0022484.1 MGP_CBAJ_G0016359.1 mouse_genomes_project 1 172354500 172368171 - MGP_CBAJ_P0022484 Tor1aip1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022485.1 MGP_CBAJ_G0016359.1 mouse_genomes_project 1 172362308 172368268 - Tor1aip1 protein_coding retained_intron MGP_CBAJ_T0000571.1 MGP_CBAJ_G0000513.1 mouse_genomes_project 1 137275683 137278710 - TEC TEC MGP_CBAJ_T0005894.1 MGP_CBAJ_G0004932.1 mouse_genomes_project 1 183578128 183618866 + Gm26665 lincRNA lincRNA MGP_CBAJ_T0000663.1 MGP_CBAJ_G0000603.1 mouse_genomes_project 1 173325410 173330397 - TEC TEC MGP_CBAJ_T0021687.1 MGP_CBAJ_G0016198.1 mouse_genomes_project 1 144932865 144959810 + MGP_CBAJ_P0021687 Rab7b protein_coding protein_coding MGP_CBAJ_T0021688.1 MGP_CBAJ_G0016198.1 mouse_genomes_project 1 144932877 144956393 + MGP_CBAJ_P0021688 Rab7b protein_coding protein_coding MGP_CBAJ_T0021689.1 MGP_CBAJ_G0016198.1 mouse_genomes_project 1 144932908 144955310 + MGP_CBAJ_P0021689 Rab7b protein_coding protein_coding MGP_CBAJ_T0021690.1 MGP_CBAJ_G0016198.1 mouse_genomes_project 1 144932936 144955477 + MGP_CBAJ_P0021690 Rab7b protein_coding protein_coding MGP_CBAJ_T0021691.1 MGP_CBAJ_G0016198.1 mouse_genomes_project 1 144940785 144949722 + Rab7b protein_coding processed_transcript MGP_CBAJ_T0099772.1 MGP_CBAJ_G0038027.1 mouse_genomes_project 1 91020556 91020680 + Gm24555 snoRNA snoRNA MGP_CBAJ_T0005797.1 MGP_CBAJ_G0004855.1 mouse_genomes_project 1 132788439 132814320 + Gm29345 lincRNA lincRNA MGP_CBAJ_T0101471.1 MGP_CBAJ_G0039503.1 mouse_genomes_project 1 102509942 102520918 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0005586.1 MGP_CBAJ_G0004697.1 mouse_genomes_project 1 33894984 33897695 - Gm37591 lincRNA lincRNA MGP_CBAJ_T0020448.1 MGP_CBAJ_G0015928.1 mouse_genomes_project 1 81463527 81521745 + MGP_CBAJ_P0020448 Speg protein_coding protein_coding MGP_CBAJ_T0020449.1 MGP_CBAJ_G0015928.1 mouse_genomes_project 1 81470334 81476577 + MGP_CBAJ_P0020449 Speg protein_coding protein_coding MGP_CBAJ_T0020450.1 MGP_CBAJ_G0015928.1 mouse_genomes_project 1 81470334 81492818 + MGP_CBAJ_P0020450 Speg protein_coding protein_coding MGP_CBAJ_T0020451.1 MGP_CBAJ_G0015928.1 mouse_genomes_project 1 81470346 81471604 + Speg protein_coding retained_intron MGP_CBAJ_T0020452.1 MGP_CBAJ_G0015928.1 mouse_genomes_project 1 81470358 81476127 + MGP_CBAJ_P0020452 Speg protein_coding nonsense_mediated_decay MGP_CBAJ_T0020453.1 MGP_CBAJ_G0015928.1 mouse_genomes_project 1 81471777 81473207 + Speg protein_coding processed_transcript MGP_CBAJ_T0020454.1 MGP_CBAJ_G0015928.1 mouse_genomes_project 1 81472931 81476180 + Speg protein_coding retained_intron MGP_CBAJ_T0020455.1 MGP_CBAJ_G0015928.1 mouse_genomes_project 1 81473059 81480155 + MGP_CBAJ_P0020455 Speg protein_coding nonsense_mediated_decay MGP_CBAJ_T0020456.1 MGP_CBAJ_G0015928.1 mouse_genomes_project 1 81473743 81477336 + Speg protein_coding processed_transcript MGP_CBAJ_T0020457.1 MGP_CBAJ_G0015928.1 mouse_genomes_project 1 81473841 81521728 + MGP_CBAJ_P0020457 Speg protein_coding protein_coding MGP_CBAJ_T0020458.1 MGP_CBAJ_G0015928.1 mouse_genomes_project 1 81488343 81492245 + MGP_CBAJ_P0020458 Speg protein_coding protein_coding MGP_CBAJ_T0020459.1 MGP_CBAJ_G0015928.1 mouse_genomes_project 1 81488779 81492625 + MGP_CBAJ_P0020459 Speg protein_coding protein_coding MGP_CBAJ_T0020460.1 MGP_CBAJ_G0015928.1 mouse_genomes_project 1 81488893 81492817 + MGP_CBAJ_P0020460 Speg protein_coding protein_coding MGP_CBAJ_T0020461.1 MGP_CBAJ_G0015928.1 mouse_genomes_project 1 81489268 81492462 + MGP_CBAJ_P0020461 Speg protein_coding protein_coding MGP_CBAJ_T0020462.1 MGP_CBAJ_G0015928.1 mouse_genomes_project 1 81512975 81517047 + Speg protein_coding retained_intron MGP_CBAJ_T0000432.1 MGP_CBAJ_G0000374.1 mouse_genomes_project 1 50025545 50027488 - TEC TEC MGP_CBAJ_T0000433.1 MGP_CBAJ_G0000375.1 mouse_genomes_project 1 50221469 50222375 + TEC TEC MGP_CBAJ_T0022912.1 MGP_CBAJ_G0016440.1 mouse_genomes_project 1 183432967 183577847 - MGP_CBAJ_P0022912 Pou2f1 protein_coding protein_coding MGP_CBAJ_T0022913.1 MGP_CBAJ_G0016440.1 mouse_genomes_project 1 183432967 183505634 - MGP_CBAJ_P0022913 Pou2f1 protein_coding protein_coding MGP_CBAJ_T0022914.1 MGP_CBAJ_G0016440.1 mouse_genomes_project 1 183443236 183484019 - MGP_CBAJ_P0022914 Pou2f1 protein_coding protein_coding MGP_CBAJ_T0022915.1 MGP_CBAJ_G0016440.1 mouse_genomes_project 1 183443270 183577787 - MGP_CBAJ_P0022915 Pou2f1 protein_coding protein_coding MGP_CBAJ_T0022916.1 MGP_CBAJ_G0016440.1 mouse_genomes_project 1 183443270 183577791 - MGP_CBAJ_P0022916 Pou2f1 protein_coding protein_coding MGP_CBAJ_T0022917.1 MGP_CBAJ_G0016440.1 mouse_genomes_project 1 183443274 183505634 - MGP_CBAJ_P0022917 Pou2f1 protein_coding protein_coding MGP_CBAJ_T0022918.1 MGP_CBAJ_G0016440.1 mouse_genomes_project 1 183443301 183447974 - MGP_CBAJ_P0022918 Pou2f1 protein_coding protein_coding MGP_CBAJ_T0022919.1 MGP_CBAJ_G0016440.1 mouse_genomes_project 1 183443397 183462875 - Pou2f1 protein_coding retained_intron MGP_CBAJ_T0022920.1 MGP_CBAJ_G0016440.1 mouse_genomes_project 1 183443421 183577798 - MGP_CBAJ_P0022920 Pou2f1 protein_coding protein_coding MGP_CBAJ_T0022921.1 MGP_CBAJ_G0016440.1 mouse_genomes_project 1 183443495 183505586 - MGP_CBAJ_P0022921 Pou2f1 protein_coding protein_coding MGP_CBAJ_T0022922.1 MGP_CBAJ_G0016440.1 mouse_genomes_project 1 183443551 183502405 - MGP_CBAJ_P0022922 Pou2f1 protein_coding protein_coding MGP_CBAJ_T0022923.1 MGP_CBAJ_G0016440.1 mouse_genomes_project 1 183447740 183505697 - Pou2f1 protein_coding retained_intron MGP_CBAJ_T0022924.1 MGP_CBAJ_G0016440.1 mouse_genomes_project 1 183447895 183505625 - Pou2f1 protein_coding retained_intron MGP_CBAJ_T0022925.1 MGP_CBAJ_G0016440.1 mouse_genomes_project 1 183461829 183577784 - Pou2f1 protein_coding retained_intron MGP_CBAJ_T0022926.1 MGP_CBAJ_G0016440.1 mouse_genomes_project 1 183482058 183577782 - MGP_CBAJ_P0022926 Pou2f1 protein_coding protein_coding MGP_CBAJ_T0022927.1 MGP_CBAJ_G0016440.1 mouse_genomes_project 1 183500348 183577798 - Pou2f1 protein_coding retained_intron MGP_CBAJ_T0022928.1 MGP_CBAJ_G0016440.1 mouse_genomes_project 1 183502384 183577778 - MGP_CBAJ_P0022928 Pou2f1 protein_coding protein_coding MGP_CBAJ_T0012192.1 MGP_CBAJ_G0010304.1 mouse_genomes_project 1 189925846 189926359 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0022207.1 MGP_CBAJ_G0016308.1 mouse_genomes_project 1 158962725 159006691 - MGP_CBAJ_P0022207 Rgs13 protein_coding protein_coding MGP_CBAJ_T0022208.1 MGP_CBAJ_G0016308.1 mouse_genomes_project 1 158962738 159006594 - MGP_CBAJ_P0022208 Rgs13 protein_coding protein_coding MGP_CBAJ_T0011118.1 MGP_CBAJ_G0009256.1 mouse_genomes_project 1 50371423 50371693 - Gm23829 misc_RNA misc_RNA MGP_CBAJ_T0009366.1 MGP_CBAJ_G0007504.1 mouse_genomes_project 1 45012996 45013081 + Gm24001 miRNA miRNA MGP_CBAJ_T0005815.1 MGP_CBAJ_G0004870.1 mouse_genomes_project 1 145592729 145600328 - Gm29630 lincRNA lincRNA MGP_CBAJ_T0005969.1 MGP_CBAJ_G0004990.1 mouse_genomes_project 1 212397473 212427211 - Gm32200 lincRNA lincRNA MGP_CBAJ_T0011929.1 MGP_CBAJ_G0010041.1 mouse_genomes_project 1 65410777 65411013 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018587.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7814834 7816190 + Cspp1 protein_coding retained_intron MGP_CBAJ_T0018588.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7814853 7824993 + MGP_CBAJ_P0018588 Cspp1 protein_coding protein_coding MGP_CBAJ_T0018589.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7815064 7926390 + MGP_CBAJ_P0018589 Cspp1 protein_coding protein_coding MGP_CBAJ_T0018590.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7815073 7839936 + Cspp1 protein_coding retained_intron MGP_CBAJ_T0018591.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7815096 7837217 + Cspp1 protein_coding retained_intron MGP_CBAJ_T0018592.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7815109 7847820 + MGP_CBAJ_P0018592 Cspp1 protein_coding protein_coding MGP_CBAJ_T0018593.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7816614 7837041 + Cspp1 protein_coding retained_intron MGP_CBAJ_T0018594.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7816620 7849380 + MGP_CBAJ_P0018594 Cspp1 protein_coding protein_coding MGP_CBAJ_T0018595.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7816620 7849737 + MGP_CBAJ_P0018595 Cspp1 protein_coding protein_coding MGP_CBAJ_T0018596.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7816624 7837027 + Cspp1 protein_coding retained_intron MGP_CBAJ_T0018597.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7816632 7847806 + MGP_CBAJ_P0018597 Cspp1 protein_coding protein_coding MGP_CBAJ_T0018598.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7816670 7838156 + Cspp1 protein_coding retained_intron MGP_CBAJ_T0018599.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7817002 7836992 + MGP_CBAJ_P0018599 Cspp1 protein_coding protein_coding MGP_CBAJ_T0018600.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7823945 7925767 + MGP_CBAJ_P0018600 Cspp1 protein_coding protein_coding MGP_CBAJ_T0018601.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7835091 7847279 + MGP_CBAJ_P0018601 Cspp1 protein_coding protein_coding MGP_CBAJ_T0018602.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7852577 7857613 + Cspp1 protein_coding retained_intron MGP_CBAJ_T0018603.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7855773 7870124 + Cspp1 protein_coding retained_intron MGP_CBAJ_T0018604.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7856263 7868688 + Cspp1 protein_coding retained_intron MGP_CBAJ_T0018605.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7856316 7874562 + MGP_CBAJ_P0018605 Cspp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018606.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7872053 7874624 + Cspp1 protein_coding retained_intron MGP_CBAJ_T0018607.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7880132 7891621 + Cspp1 protein_coding retained_intron MGP_CBAJ_T0018608.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7887295 7891610 + Cspp1 protein_coding retained_intron MGP_CBAJ_T0018609.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7895728 7924025 + MGP_CBAJ_P0018609 Cspp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018610.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7898277 7899604 + Cspp1 protein_coding retained_intron MGP_CBAJ_T0018611.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7915596 7919869 + Cspp1 protein_coding retained_intron MGP_CBAJ_T0018612.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7919809 7923311 + Cspp1 protein_coding retained_intron MGP_CBAJ_T0018613.1 MGP_CBAJ_G0015578.1 mouse_genomes_project 1 7923821 7925944 + Cspp1 protein_coding retained_intron MGP_CBAJ_T0101468.1 MGP_CBAJ_G0039500.1 mouse_genomes_project 1 100926740 100926786 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0012222.1 MGP_CBAJ_G0010334.1 mouse_genomes_project 1 210608337 210608599 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011833.1 MGP_CBAJ_G0009945.1 mouse_genomes_project 1 35189088 35190721 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0019215.1 MGP_CBAJ_G0015699.1 mouse_genomes_project 1 40832952 40836443 + MGP_CBAJ_P0019215 Rpl31 protein_coding protein_coding MGP_CBAJ_T0019216.1 MGP_CBAJ_G0015699.1 mouse_genomes_project 1 40833223 40836410 + MGP_CBAJ_P0019216 Rpl31 protein_coding protein_coding MGP_CBAJ_T0019217.1 MGP_CBAJ_G0015699.1 mouse_genomes_project 1 40834926 40836443 + Rpl31 protein_coding retained_intron MGP_CBAJ_T0000758.1 MGP_CBAJ_G0000696.1 mouse_genomes_project 1 212177827 212179674 + TEC TEC MGP_CBAJ_T0012216.1 MGP_CBAJ_G0010328.1 mouse_genomes_project 1 206183198 206183795 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098250.1 MGP_CBAJ_G0036522.1 mouse_genomes_project 1 182946348 182949423 - Gm37864 sense_intronic sense_intronic MGP_CBAJ_T0011884.1 MGP_CBAJ_G0009996.1 mouse_genomes_project 1 51945954 51946169 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011798.1 MGP_CBAJ_G0009910.1 mouse_genomes_project 1 22780010 22780998 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000734.1 MGP_CBAJ_G0000673.1 mouse_genomes_project 1 201523854 201527667 - TEC TEC MGP_CBAJ_T0023525.1 MGP_CBAJ_G0016601.1 mouse_genomes_project 1 199541937 199750057 + MGP_CBAJ_P0023525 Cdc42bpa protein_coding protein_coding MGP_CBAJ_T0023526.1 MGP_CBAJ_G0016601.1 mouse_genomes_project 1 199542050 199752498 + MGP_CBAJ_P0023526 Cdc42bpa protein_coding protein_coding MGP_CBAJ_T0023527.1 MGP_CBAJ_G0016601.1 mouse_genomes_project 1 199542225 199696521 + MGP_CBAJ_P0023527 Cdc42bpa protein_coding nonsense_mediated_decay MGP_CBAJ_T0023528.1 MGP_CBAJ_G0016601.1 mouse_genomes_project 1 199542576 199749067 + MGP_CBAJ_P0023528 Cdc42bpa protein_coding protein_coding MGP_CBAJ_T0023529.1 MGP_CBAJ_G0016601.1 mouse_genomes_project 1 199542576 199749067 + MGP_CBAJ_P0023529 Cdc42bpa protein_coding protein_coding MGP_CBAJ_T0023530.1 MGP_CBAJ_G0016601.1 mouse_genomes_project 1 199557080 199626966 + Cdc42bpa protein_coding processed_transcript MGP_CBAJ_T0023531.1 MGP_CBAJ_G0016601.1 mouse_genomes_project 1 199572586 199623717 + Cdc42bpa protein_coding retained_intron MGP_CBAJ_T0023532.1 MGP_CBAJ_G0016601.1 mouse_genomes_project 1 199669256 199679453 + Cdc42bpa protein_coding retained_intron MGP_CBAJ_T0023533.1 MGP_CBAJ_G0016601.1 mouse_genomes_project 1 199685751 199749489 + MGP_CBAJ_P0023533 Cdc42bpa protein_coding protein_coding MGP_CBAJ_T0023534.1 MGP_CBAJ_G0016601.1 mouse_genomes_project 1 199691625 199703593 + Cdc42bpa protein_coding retained_intron MGP_CBAJ_T0023535.1 MGP_CBAJ_G0016601.1 mouse_genomes_project 1 199693606 199696796 + Cdc42bpa protein_coding retained_intron MGP_CBAJ_T0023536.1 MGP_CBAJ_G0016601.1 mouse_genomes_project 1 199693806 199752497 + MGP_CBAJ_P0023536 Cdc42bpa protein_coding protein_coding MGP_CBAJ_T0023537.1 MGP_CBAJ_G0016601.1 mouse_genomes_project 1 199693879 199736013 + MGP_CBAJ_P0023537 Cdc42bpa protein_coding protein_coding MGP_CBAJ_T0023538.1 MGP_CBAJ_G0016601.1 mouse_genomes_project 1 199695968 199723315 + MGP_CBAJ_P0023538 Cdc42bpa protein_coding protein_coding MGP_CBAJ_T0023539.1 MGP_CBAJ_G0016601.1 mouse_genomes_project 1 199695986 199700939 + Cdc42bpa protein_coding retained_intron MGP_CBAJ_T0023540.1 MGP_CBAJ_G0016601.1 mouse_genomes_project 1 199708197 199725139 + Cdc42bpa protein_coding processed_transcript MGP_CBAJ_T0023541.1 MGP_CBAJ_G0016601.1 mouse_genomes_project 1 199747891 199749195 + Cdc42bpa protein_coding retained_intron MGP_CBAJ_T0011791.1 MGP_CBAJ_G0009903.1 mouse_genomes_project 1 20604094 20605218 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0019342.1 MGP_CBAJ_G0015729.1 mouse_genomes_project 1 46160758 46180040 - MGP_CBAJ_P0019342 Tex30 protein_coding protein_coding MGP_CBAJ_T0019343.1 MGP_CBAJ_G0015729.1 mouse_genomes_project 1 46160761 46180087 - MGP_CBAJ_P0019343 Tex30 protein_coding protein_coding MGP_CBAJ_T0019344.1 MGP_CBAJ_G0015729.1 mouse_genomes_project 1 46160955 46180011 - MGP_CBAJ_P0019344 Tex30 protein_coding protein_coding MGP_CBAJ_T0019345.1 MGP_CBAJ_G0015729.1 mouse_genomes_project 1 46160955 46179992 - MGP_CBAJ_P0019345 Tex30 protein_coding protein_coding MGP_CBAJ_T0019346.1 MGP_CBAJ_G0015729.1 mouse_genomes_project 1 46161005 46180072 - MGP_CBAJ_P0019346 Tex30 protein_coding protein_coding MGP_CBAJ_T0019347.1 MGP_CBAJ_G0015729.1 mouse_genomes_project 1 46161006 46180090 - MGP_CBAJ_P0019347 Tex30 protein_coding protein_coding MGP_CBAJ_T0019348.1 MGP_CBAJ_G0015729.1 mouse_genomes_project 1 46161007 46179306 - MGP_CBAJ_P0019348 Tex30 protein_coding protein_coding MGP_CBAJ_T0019349.1 MGP_CBAJ_G0015729.1 mouse_genomes_project 1 46161174 46180082 - MGP_CBAJ_P0019349 Tex30 protein_coding protein_coding MGP_CBAJ_T0019350.1 MGP_CBAJ_G0015729.1 mouse_genomes_project 1 46162046 46180050 - MGP_CBAJ_P0019350 Tex30 protein_coding protein_coding MGP_CBAJ_T0019351.1 MGP_CBAJ_G0015729.1 mouse_genomes_project 1 46162162 46179662 - MGP_CBAJ_P0019351 Tex30 protein_coding protein_coding MGP_CBAJ_T0019352.1 MGP_CBAJ_G0015729.1 mouse_genomes_project 1 46162648 46180063 - MGP_CBAJ_P0019352 Tex30 protein_coding protein_coding MGP_CBAJ_T0019353.1 MGP_CBAJ_G0015729.1 mouse_genomes_project 1 46162654 46180086 - MGP_CBAJ_P0019353 Tex30 protein_coding protein_coding MGP_CBAJ_T0019354.1 MGP_CBAJ_G0015729.1 mouse_genomes_project 1 46162660 46177634 - MGP_CBAJ_P0019354 Tex30 protein_coding protein_coding MGP_CBAJ_T0020229.1 MGP_CBAJ_G0015893.1 mouse_genomes_project 1 80454496 80484505 + MGP_CBAJ_P0020229 Vil1 protein_coding protein_coding MGP_CBAJ_T0020230.1 MGP_CBAJ_G0015893.1 mouse_genomes_project 1 80467579 80471653 + MGP_CBAJ_P0020230 Vil1 protein_coding protein_coding MGP_CBAJ_T0020231.1 MGP_CBAJ_G0015893.1 mouse_genomes_project 1 80469942 80471646 + Vil1 protein_coding retained_intron MGP_CBAJ_T0020232.1 MGP_CBAJ_G0015893.1 mouse_genomes_project 1 80472320 80474600 + Vil1 protein_coding retained_intron MGP_CBAJ_T0002937.1 MGP_CBAJ_G0002752.1 mouse_genomes_project 1 216191430 216215248 - Gm16897 antisense antisense MGP_CBAJ_T0009441.1 MGP_CBAJ_G0007579.1 mouse_genomes_project 1 205004771 205004853 - Mir1981 miRNA miRNA MGP_CBAJ_T0000767.1 MGP_CBAJ_G0000704.1 mouse_genomes_project 1 214614082 214616177 + TEC TEC MGP_CBAJ_T0021769.1 MGP_CBAJ_G0016215.1 mouse_genomes_project 1 145847804 145850214 + MGP_CBAJ_P0021769 Tmem81 protein_coding protein_coding MGP_CBAJ_T0021770.1 MGP_CBAJ_G0016215.1 mouse_genomes_project 1 145848463 145850214 + MGP_CBAJ_P0021770 Tmem81 protein_coding protein_coding MGP_CBAJ_T0000774.1 MGP_CBAJ_G0000711.1 mouse_genomes_project 1 216288184 216290481 + TEC TEC MGP_CBAJ_T0019232.1 MGP_CBAJ_G0015704.1 mouse_genomes_project 1 41178412 41231608 - MGP_CBAJ_P0019232 Rfx8 protein_coding protein_coding MGP_CBAJ_T0019233.1 MGP_CBAJ_G0015704.1 mouse_genomes_project 1 41193951 41205013 - Rfx8 protein_coding processed_transcript MGP_CBAJ_T0023361.1 MGP_CBAJ_G0016552.1 mouse_genomes_project 1 192813108 192834675 - MGP_CBAJ_P0023361 protein_coding protein_coding MGP_CBAJ_T0019766.1 MGP_CBAJ_G0015805.1 mouse_genomes_project 1 63318211 63359911 - MGP_CBAJ_P0019766 Mpp4 protein_coding protein_coding MGP_CBAJ_T0019767.1 MGP_CBAJ_G0015805.1 mouse_genomes_project 1 63318211 63362879 - MGP_CBAJ_P0019767 Mpp4 protein_coding protein_coding MGP_CBAJ_T0019768.1 MGP_CBAJ_G0015805.1 mouse_genomes_project 1 63318211 63364632 - MGP_CBAJ_P0019768 Mpp4 protein_coding protein_coding MGP_CBAJ_T0019769.1 MGP_CBAJ_G0015805.1 mouse_genomes_project 1 63318212 63362879 - MGP_CBAJ_P0019769 Mpp4 protein_coding protein_coding MGP_CBAJ_T0019770.1 MGP_CBAJ_G0015805.1 mouse_genomes_project 1 63318216 63345101 - Mpp4 protein_coding processed_transcript MGP_CBAJ_T0019771.1 MGP_CBAJ_G0015805.1 mouse_genomes_project 1 63318420 63359904 - MGP_CBAJ_P0019771 Mpp4 protein_coding protein_coding MGP_CBAJ_T0019772.1 MGP_CBAJ_G0015805.1 mouse_genomes_project 1 63318529 63362810 - Mpp4 protein_coding retained_intron MGP_CBAJ_T0019773.1 MGP_CBAJ_G0015805.1 mouse_genomes_project 1 63336411 63351641 - Mpp4 protein_coding retained_intron MGP_CBAJ_T0019774.1 MGP_CBAJ_G0015805.1 mouse_genomes_project 1 63336413 63349934 - Mpp4 protein_coding retained_intron MGP_CBAJ_T0019775.1 MGP_CBAJ_G0015805.1 mouse_genomes_project 1 63347425 63362815 - Mpp4 protein_coding retained_intron MGP_CBAJ_T0011841.1 MGP_CBAJ_G0009953.1 mouse_genomes_project 1 35635187 35635542 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0020159.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79889817 80118885 - MGP_CBAJ_P0020159 Tns1 protein_coding protein_coding MGP_CBAJ_T0020160.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79889818 80118887 - MGP_CBAJ_P0020160 Tns1 protein_coding protein_coding MGP_CBAJ_T0020161.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79889818 80082044 - MGP_CBAJ_P0020161 Tns1 protein_coding protein_coding MGP_CBAJ_T0020162.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79893497 79908100 - MGP_CBAJ_P0020162 Tns1 protein_coding protein_coding MGP_CBAJ_T0020163.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79893679 79980487 - MGP_CBAJ_P0020163 Tns1 protein_coding protein_coding MGP_CBAJ_T0020164.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79893703 79980487 - MGP_CBAJ_P0020164 Tns1 protein_coding protein_coding MGP_CBAJ_T0020165.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79894116 80118885 - MGP_CBAJ_P0020165 Tns1 protein_coding unknown_likely_coding MGP_CBAJ_T0020166.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79904718 79920675 - MGP_CBAJ_P0020166 Tns1 protein_coding protein_coding MGP_CBAJ_T0020167.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79905005 79907804 - Tns1 protein_coding retained_intron MGP_CBAJ_T0020168.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79905005 79910398 - Tns1 protein_coding processed_transcript MGP_CBAJ_T0020169.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79905218 79910092 - Tns1 protein_coding processed_transcript MGP_CBAJ_T0020170.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79933029 79942686 - MGP_CBAJ_P0020170 Tns1 protein_coding protein_coding MGP_CBAJ_T0020171.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79963134 79969420 - Tns1 protein_coding retained_intron MGP_CBAJ_T0020172.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79974872 79983438 - Tns1 protein_coding retained_intron MGP_CBAJ_T0020173.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79975524 80004041 - Tns1 protein_coding processed_transcript MGP_CBAJ_T0020174.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79977250 79983438 - Tns1 protein_coding processed_transcript MGP_CBAJ_T0020175.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79977355 79986509 - MGP_CBAJ_P0020175 Tns1 protein_coding protein_coding MGP_CBAJ_T0020176.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79978313 80024742 - MGP_CBAJ_P0020176 Tns1 protein_coding protein_coding MGP_CBAJ_T0020177.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79979930 79982810 - Tns1 protein_coding retained_intron MGP_CBAJ_T0020178.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79980402 80087519 - MGP_CBAJ_P0020178 Tns1 protein_coding protein_coding MGP_CBAJ_T0020179.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79982169 80087562 - MGP_CBAJ_P0020179 Tns1 protein_coding protein_coding MGP_CBAJ_T0020180.1 MGP_CBAJ_G0015881.1 mouse_genomes_project 1 79987245 80024766 - Tns1 protein_coding processed_transcript MGP_CBAJ_T0002791.1 MGP_CBAJ_G0002641.1 mouse_genomes_project 1 102095275 102096592 + Gm28536 antisense antisense MGP_CBAJ_T0005651.1 MGP_CBAJ_G0004740.1 mouse_genomes_project 1 60983286 60985347 + 1700126A01Rik lincRNA lincRNA MGP_CBAJ_T0011797.1 MGP_CBAJ_G0009909.1 mouse_genomes_project 1 22634603 22635247 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099785.1 MGP_CBAJ_G0038040.1 mouse_genomes_project 1 117718870 117719001 - Gm24553 snoRNA snoRNA MGP_CBAJ_T0018857.1 MGP_CBAJ_G0015635.1 mouse_genomes_project 1 24578433 24753837 - MGP_CBAJ_P0018857 Adgrb3 protein_coding protein_coding MGP_CBAJ_T0018858.1 MGP_CBAJ_G0015635.1 mouse_genomes_project 1 24578507 25413619 - MGP_CBAJ_P0018858 Adgrb3 protein_coding protein_coding MGP_CBAJ_T0018859.1 MGP_CBAJ_G0015635.1 mouse_genomes_project 1 24578507 25416971 - MGP_CBAJ_P0018859 Adgrb3 protein_coding protein_coding MGP_CBAJ_T0018860.1 MGP_CBAJ_G0015635.1 mouse_genomes_project 1 24578507 25417166 - MGP_CBAJ_P0018860 Adgrb3 protein_coding protein_coding MGP_CBAJ_T0018861.1 MGP_CBAJ_G0015635.1 mouse_genomes_project 1 24578635 25414240 - MGP_CBAJ_P0018861 Adgrb3 protein_coding protein_coding MGP_CBAJ_T0018862.1 MGP_CBAJ_G0015635.1 mouse_genomes_project 1 24578648 24754111 - Adgrb3 protein_coding retained_intron MGP_CBAJ_T0018863.1 MGP_CBAJ_G0015635.1 mouse_genomes_project 1 24605444 24754057 - Adgrb3 protein_coding retained_intron MGP_CBAJ_T0018864.1 MGP_CBAJ_G0015635.1 mouse_genomes_project 1 24641933 24727549 - Adgrb3 protein_coding processed_transcript MGP_CBAJ_T0018865.1 MGP_CBAJ_G0015635.1 mouse_genomes_project 1 24726278 24728519 - Adgrb3 protein_coding retained_intron MGP_CBAJ_T0018866.1 MGP_CBAJ_G0015635.1 mouse_genomes_project 1 24743025 24753838 - Adgrb3 protein_coding retained_intron MGP_CBAJ_T0018867.1 MGP_CBAJ_G0015635.1 mouse_genomes_project 1 25048028 25413827 - Adgrb3 protein_coding retained_intron MGP_CBAJ_T0005957.1 MGP_CBAJ_G0004980.1 mouse_genomes_project 1 207376759 207379939 + 1700023G09Rik lincRNA lincRNA MGP_CBAJ_T0005958.1 MGP_CBAJ_G0004980.1 mouse_genomes_project 1 207376788 207379153 + 1700023G09Rik lincRNA lincRNA MGP_CBAJ_T0000760.1 MGP_CBAJ_G0000698.1 mouse_genomes_project 1 212577016 212577640 + TEC TEC MGP_CBAJ_T0022712.1 MGP_CBAJ_G0016397.1 mouse_genomes_project 1 179049786 179089895 - MGP_CBAJ_P0022712 4930558K02Rik protein_coding protein_coding MGP_CBAJ_T0022713.1 MGP_CBAJ_G0016397.1 mouse_genomes_project 1 179049791 179079514 - 4930558K02Rik protein_coding processed_transcript MGP_CBAJ_T0005886.1 MGP_CBAJ_G0004927.1 mouse_genomes_project 1 182125854 182134701 - Gm36945 lincRNA lincRNA MGP_CBAJ_T0005887.1 MGP_CBAJ_G0004927.1 mouse_genomes_project 1 182126031 182134729 - Gm36945 lincRNA lincRNA MGP_CBAJ_T0011926.1 MGP_CBAJ_G0010038.1 mouse_genomes_project 1 65131930 65132996 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005901.1 MGP_CBAJ_G0004938.1 mouse_genomes_project 1 187197034 187221479 - Gm37839 lincRNA lincRNA MGP_CBAJ_T0021951.1 MGP_CBAJ_G0016256.1 mouse_genomes_project 1 148659661 148673521 + MGP_CBAJ_P0021951 Ube2t protein_coding protein_coding MGP_CBAJ_T0021952.1 MGP_CBAJ_G0016256.1 mouse_genomes_project 1 148659687 148663117 + Ube2t protein_coding retained_intron MGP_CBAJ_T0021953.1 MGP_CBAJ_G0016256.1 mouse_genomes_project 1 148668564 148673518 + MGP_CBAJ_P0021953 Ube2t protein_coding protein_coding MGP_CBAJ_T0021954.1 MGP_CBAJ_G0016256.1 mouse_genomes_project 1 148671312 148672214 + Ube2t protein_coding retained_intron MGP_CBAJ_T0011918.1 MGP_CBAJ_G0010030.1 mouse_genomes_project 1 63356849 63358232 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0019988.1 MGP_CBAJ_G0015844.1 mouse_genomes_project 1 69986072 69987655 - MGP_CBAJ_P0019988 Crygd protein_coding protein_coding MGP_CBAJ_T0019989.1 MGP_CBAJ_G0015844.1 mouse_genomes_project 1 69986545 69987504 - MGP_CBAJ_P0019989 Crygd protein_coding protein_coding MGP_CBAJ_T0019990.1 MGP_CBAJ_G0015844.1 mouse_genomes_project 1 69986931 69987655 - Crygd protein_coding retained_intron MGP_CBAJ_T0005574.1 MGP_CBAJ_G0004686.1 mouse_genomes_project 1 19829974 19831804 - 6720483E21Rik lincRNA lincRNA MGP_CBAJ_T0021274.1 MGP_CBAJ_G0016103.1 mouse_genomes_project 1 109113240 109925741 + MGP_CBAJ_P0021274 Cntnap5b protein_coding protein_coding MGP_CBAJ_T0021275.1 MGP_CBAJ_G0016103.1 mouse_genomes_project 1 109493507 109926834 + MGP_CBAJ_P0021275 Cntnap5b protein_coding protein_coding MGP_CBAJ_T0021276.1 MGP_CBAJ_G0016103.1 mouse_genomes_project 1 109663542 109799477 + Cntnap5b protein_coding processed_transcript MGP_CBAJ_T0011969.1 MGP_CBAJ_G0010081.1 mouse_genomes_project 1 79466347 79467343 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100992.1 MGP_CBAJ_G0039245.1 mouse_genomes_project 1 48317397 48331851 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0100993.1 MGP_CBAJ_G0039245.1 mouse_genomes_project 1 48317740 48331819 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0100994.1 MGP_CBAJ_G0039245.1 mouse_genomes_project 1 48331012 48331628 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0002754.1 MGP_CBAJ_G0002612.1 mouse_genomes_project 1 68895662 68910212 + Gm13748 antisense antisense MGP_CBAJ_T0002786.1 MGP_CBAJ_G0002636.1 mouse_genomes_project 1 101191771 101208718 - Gm29481 antisense antisense MGP_CBAJ_T0021334.1 MGP_CBAJ_G0016118.1 mouse_genomes_project 1 117542134 117554531 - MGP_CBAJ_P0021334 Serpinb3b protein_coding protein_coding MGP_CBAJ_T0101251.1 MGP_CBAJ_G0039388.1 mouse_genomes_project 1 191995344 191999679 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0000362.1 MGP_CBAJ_G0000307.1 mouse_genomes_project 1 15421195 15422022 + TEC TEC MGP_CBAJ_T0012215.1 MGP_CBAJ_G0010327.1 mouse_genomes_project 1 203994392 203994539 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005639.1 MGP_CBAJ_G0004732.1 mouse_genomes_project 1 54531022 54532022 - 1700072G22Rik lincRNA lincRNA MGP_CBAJ_T0023107.1 MGP_CBAJ_G0016488.1 mouse_genomes_project 1 189416449 189428764 - Ndufs2 protein_coding retained_intron MGP_CBAJ_T0023108.1 MGP_CBAJ_G0016488.1 mouse_genomes_project 1 189416449 189417141 - Ndufs2 protein_coding retained_intron MGP_CBAJ_T0023109.1 MGP_CBAJ_G0016488.1 mouse_genomes_project 1 189416449 189419127 - Ndufs2 protein_coding processed_transcript MGP_CBAJ_T0023110.1 MGP_CBAJ_G0016488.1 mouse_genomes_project 1 189416449 189428764 - MGP_CBAJ_P0023110 Ndufs2 protein_coding protein_coding MGP_CBAJ_T0023111.1 MGP_CBAJ_G0016488.1 mouse_genomes_project 1 189416449 189428764 - MGP_CBAJ_P0023111 Ndufs2 protein_coding protein_coding MGP_CBAJ_T0023112.1 MGP_CBAJ_G0016488.1 mouse_genomes_project 1 189418743 189421643 - Ndufs2 protein_coding processed_transcript MGP_CBAJ_T0023113.1 MGP_CBAJ_G0016488.1 mouse_genomes_project 1 189420118 189435427 - MGP_CBAJ_P0023113 Ndufs2 protein_coding protein_coding MGP_CBAJ_T0023114.1 MGP_CBAJ_G0016488.1 mouse_genomes_project 1 189420336 189435564 - MGP_CBAJ_P0023114 Ndufs2 protein_coding protein_coding MGP_CBAJ_T0005828.1 MGP_CBAJ_G0004883.1 mouse_genomes_project 1 150516590 150519143 - Platr23 lincRNA lincRNA MGP_CBAJ_T0020227.1 MGP_CBAJ_G0015892.1 mouse_genomes_project 1 80434249 80438597 + MGP_CBAJ_P0020227 Ctdsp1 protein_coding protein_coding MGP_CBAJ_T0020228.1 MGP_CBAJ_G0015892.1 mouse_genomes_project 1 80434917 80436940 + MGP_CBAJ_P0020228 Ctdsp1 protein_coding protein_coding MGP_CBAJ_T0101480.1 MGP_CBAJ_G0039512.1 mouse_genomes_project 1 117452866 117454959 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0101249.1 MGP_CBAJ_G0039387.1 mouse_genomes_project 1 188240542 188242231 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101250.1 MGP_CBAJ_G0039387.1 mouse_genomes_project 1 188241871 188242072 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0012204.1 MGP_CBAJ_G0010316.1 mouse_genomes_project 1 200376153 200376675 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0020254.1 MGP_CBAJ_G0015897.1 mouse_genomes_project 1 80628253 80654826 - MGP_CBAJ_P0020254 Zfp142 protein_coding protein_coding MGP_CBAJ_T0020255.1 MGP_CBAJ_G0015897.1 mouse_genomes_project 1 80629552 80654823 - MGP_CBAJ_P0020255 Zfp142 protein_coding protein_coding MGP_CBAJ_T0020256.1 MGP_CBAJ_G0015897.1 mouse_genomes_project 1 80629628 80654943 - MGP_CBAJ_P0020256 Zfp142 protein_coding protein_coding MGP_CBAJ_T0020257.1 MGP_CBAJ_G0015897.1 mouse_genomes_project 1 80629809 80655044 - MGP_CBAJ_P0020257 Zfp142 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020258.1 MGP_CBAJ_G0015897.1 mouse_genomes_project 1 80629995 80652465 - MGP_CBAJ_P0020258 Zfp142 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020259.1 MGP_CBAJ_G0015897.1 mouse_genomes_project 1 80649030 80654993 - Zfp142 protein_coding retained_intron MGP_CBAJ_T0020260.1 MGP_CBAJ_G0015897.1 mouse_genomes_project 1 80649037 80654750 - Zfp142 protein_coding retained_intron MGP_CBAJ_T0020261.1 MGP_CBAJ_G0015897.1 mouse_genomes_project 1 80652386 80654931 - Zfp142 protein_coding processed_transcript MGP_CBAJ_T0020540.1 MGP_CBAJ_G0015942.1 mouse_genomes_project 1 84987111 85009479 + MGP_CBAJ_P0020540 Mogat1 protein_coding protein_coding MGP_CBAJ_T0020541.1 MGP_CBAJ_G0015942.1 mouse_genomes_project 1 84987280 85011019 + MGP_CBAJ_P0020541 Mogat1 protein_coding protein_coding MGP_CBAJ_T0020542.1 MGP_CBAJ_G0015942.1 mouse_genomes_project 1 84987289 85019949 + MGP_CBAJ_P0020542 Mogat1 protein_coding protein_coding MGP_CBAJ_T0020543.1 MGP_CBAJ_G0015942.1 mouse_genomes_project 1 84987933 85004623 + MGP_CBAJ_P0020543 Mogat1 protein_coding protein_coding MGP_CBAJ_T0020544.1 MGP_CBAJ_G0015942.1 mouse_genomes_project 1 84987988 85019951 + MGP_CBAJ_P0020544 Mogat1 protein_coding protein_coding MGP_CBAJ_T0020545.1 MGP_CBAJ_G0015942.1 mouse_genomes_project 1 85019405 85019951 + Mogat1 protein_coding processed_transcript MGP_CBAJ_T0000332.1 MGP_CBAJ_G0000277.1 mouse_genomes_project 1 3200830 3202599 - TEC TEC MGP_CBAJ_T0009423.1 MGP_CBAJ_G0007561.1 mouse_genomes_project 1 175187063 175187172 + Mir488 miRNA miRNA MGP_CBAJ_T0023230.1 MGP_CBAJ_G0016514.1 mouse_genomes_project 1 190356920 190373782 - MGP_CBAJ_P0023230 Ncstn protein_coding nonsense_mediated_decay MGP_CBAJ_T0023231.1 MGP_CBAJ_G0016514.1 mouse_genomes_project 1 190356920 190373782 - MGP_CBAJ_P0023231 Ncstn protein_coding protein_coding MGP_CBAJ_T0023232.1 MGP_CBAJ_G0016514.1 mouse_genomes_project 1 190356920 190373782 - MGP_CBAJ_P0023232 Ncstn protein_coding nonsense_mediated_decay MGP_CBAJ_T0023233.1 MGP_CBAJ_G0016514.1 mouse_genomes_project 1 190357608 190358973 - Ncstn protein_coding retained_intron MGP_CBAJ_T0023234.1 MGP_CBAJ_G0016514.1 mouse_genomes_project 1 190358778 190362174 - Ncstn protein_coding retained_intron MGP_CBAJ_T0023235.1 MGP_CBAJ_G0016514.1 mouse_genomes_project 1 190371724 190373782 - Ncstn protein_coding retained_intron MGP_CBAJ_T0022971.1 MGP_CBAJ_G0016452.1 mouse_genomes_project 1 184995363 185026731 + MGP_CBAJ_P0022971 Tmco1 protein_coding protein_coding MGP_CBAJ_T0022972.1 MGP_CBAJ_G0016452.1 mouse_genomes_project 1 184995655 185026731 + MGP_CBAJ_P0022972 Tmco1 protein_coding protein_coding MGP_CBAJ_T0022973.1 MGP_CBAJ_G0016452.1 mouse_genomes_project 1 184995721 185029868 + MGP_CBAJ_P0022973 Tmco1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022974.1 MGP_CBAJ_G0016452.1 mouse_genomes_project 1 185006751 185026546 + MGP_CBAJ_P0022974 Tmco1 protein_coding protein_coding MGP_CBAJ_T0101244.1 MGP_CBAJ_G0039384.1 mouse_genomes_project 1 62717753 62723265 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101245.1 MGP_CBAJ_G0039384.1 mouse_genomes_project 1 62722398 62722528 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0018822.1 MGP_CBAJ_G0015626.1 mouse_genomes_project 1 22374259 22376040 - MGP_CBAJ_P0018822 4933415F23Rik protein_coding protein_coding MGP_CBAJ_T0011763.1 MGP_CBAJ_G0009875.1 mouse_genomes_project 1 10092388 10093258 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0020690.1 MGP_CBAJ_G0015974.1 mouse_genomes_project 1 92903845 92905264 - protein_coding processed_transcript MGP_CBAJ_T0009348.1 MGP_CBAJ_G0007486.1 mouse_genomes_project 1 6452420 6452530 + Gm24276 miRNA miRNA MGP_CBAJ_T0000489.1 MGP_CBAJ_G0000431.1 mouse_genomes_project 1 84830559 84831375 + TEC TEC MGP_CBAJ_T0022701.1 MGP_CBAJ_G0016393.1 mouse_genomes_project 1 178426750 178449690 + MGP_CBAJ_P0022701 Tnfsf4 protein_coding protein_coding MGP_CBAJ_T0005876.1 MGP_CBAJ_G0004918.1 mouse_genomes_project 1 178997197 179009196 + Gm31925 lincRNA lincRNA MGP_CBAJ_T0005877.1 MGP_CBAJ_G0004918.1 mouse_genomes_project 1 179000383 179011420 + Gm31925 lincRNA lincRNA MGP_CBAJ_T0020262.1 MGP_CBAJ_G0015898.1 mouse_genomes_project 1 80655086 80658922 + MGP_CBAJ_P0020262 Bcs1l protein_coding protein_coding MGP_CBAJ_T0020263.1 MGP_CBAJ_G0015898.1 mouse_genomes_project 1 80655097 80659259 + MGP_CBAJ_P0020263 Bcs1l protein_coding protein_coding MGP_CBAJ_T0020264.1 MGP_CBAJ_G0015898.1 mouse_genomes_project 1 80655171 80658987 + MGP_CBAJ_P0020264 Bcs1l protein_coding protein_coding MGP_CBAJ_T0020265.1 MGP_CBAJ_G0015898.1 mouse_genomes_project 1 80657063 80657706 + Bcs1l protein_coding retained_intron MGP_CBAJ_T0021451.1 MGP_CBAJ_G0016145.1 mouse_genomes_project 1 132003498 132011125 - MGP_CBAJ_P0021451 Dbi protein_coding protein_coding MGP_CBAJ_T0021452.1 MGP_CBAJ_G0016145.1 mouse_genomes_project 1 132003502 132011189 - MGP_CBAJ_P0021452 Dbi protein_coding nonsense_mediated_decay MGP_CBAJ_T0021453.1 MGP_CBAJ_G0016145.1 mouse_genomes_project 1 132003581 132010342 - Dbi protein_coding processed_transcript MGP_CBAJ_T0021454.1 MGP_CBAJ_G0016145.1 mouse_genomes_project 1 132003612 132011109 - MGP_CBAJ_P0021454 Dbi protein_coding protein_coding MGP_CBAJ_T0021455.1 MGP_CBAJ_G0016145.1 mouse_genomes_project 1 132006222 132011219 - Dbi protein_coding retained_intron MGP_CBAJ_T0021456.1 MGP_CBAJ_G0016145.1 mouse_genomes_project 1 132009929 132011186 - Dbi protein_coding retained_intron MGP_CBAJ_T0000425.1 MGP_CBAJ_G0000367.1 mouse_genomes_project 1 44412338 44416189 + TEC TEC MGP_CBAJ_T0020421.1 MGP_CBAJ_G0015924.1 mouse_genomes_project 1 81320437 81337492 - MGP_CBAJ_P0020421 Ptprn protein_coding protein_coding MGP_CBAJ_T0020422.1 MGP_CBAJ_G0015924.1 mouse_genomes_project 1 81330116 81331256 - Ptprn protein_coding retained_intron MGP_CBAJ_T0020423.1 MGP_CBAJ_G0015924.1 mouse_genomes_project 1 81331749 81337187 - MGP_CBAJ_P0020423 Ptprn protein_coding protein_coding MGP_CBAJ_T0020424.1 MGP_CBAJ_G0015924.1 mouse_genomes_project 1 81331749 81337329 - MGP_CBAJ_P0020424 Ptprn protein_coding protein_coding MGP_CBAJ_T0020425.1 MGP_CBAJ_G0015924.1 mouse_genomes_project 1 81331817 81337781 - MGP_CBAJ_P0020425 Ptprn protein_coding protein_coding MGP_CBAJ_T0020426.1 MGP_CBAJ_G0015924.1 mouse_genomes_project 1 81331841 81337487 - Ptprn protein_coding processed_transcript MGP_CBAJ_T0000764.1 MGP_CBAJ_G0000701.1 mouse_genomes_project 1 214353195 214355419 - TEC TEC MGP_CBAJ_T0022404.1 MGP_CBAJ_G0016344.1 mouse_genomes_project 1 169974689 170034818 - MGP_CBAJ_P0022404 Teddm2 protein_coding protein_coding MGP_CBAJ_T0022405.1 MGP_CBAJ_G0016344.1 mouse_genomes_project 1 169974689 169976343 - MGP_CBAJ_P0022405 Teddm2 protein_coding protein_coding MGP_CBAJ_T0022408.1 MGP_CBAJ_G0016344.1 mouse_genomes_project 1 170031718 170034838 - Teddm2 protein_coding retained_intron MGP_CBAJ_T0023092.1 MGP_CBAJ_G0016485.1 mouse_genomes_project 1 189392076 189398584 - MGP_CBAJ_P0023092 Tomm40l protein_coding protein_coding MGP_CBAJ_T0023093.1 MGP_CBAJ_G0016485.1 mouse_genomes_project 1 189393868 189398518 - MGP_CBAJ_P0023093 Tomm40l protein_coding protein_coding MGP_CBAJ_T0023094.1 MGP_CBAJ_G0016485.1 mouse_genomes_project 1 189393868 189398254 - MGP_CBAJ_P0023094 Tomm40l protein_coding protein_coding MGP_CBAJ_T0023095.1 MGP_CBAJ_G0016485.1 mouse_genomes_project 1 189394429 189398521 - MGP_CBAJ_P0023095 Tomm40l protein_coding nonsense_mediated_decay MGP_CBAJ_T0023096.1 MGP_CBAJ_G0016485.1 mouse_genomes_project 1 189396894 189398530 - MGP_CBAJ_P0023096 Tomm40l protein_coding protein_coding MGP_CBAJ_T0023097.1 MGP_CBAJ_G0016485.1 mouse_genomes_project 1 189396965 189398514 - MGP_CBAJ_P0023097 Tomm40l protein_coding protein_coding MGP_CBAJ_T0023098.1 MGP_CBAJ_G0016485.1 mouse_genomes_project 1 189397154 189398502 - Tomm40l protein_coding processed_transcript MGP_CBAJ_T0023099.1 MGP_CBAJ_G0016485.1 mouse_genomes_project 1 189397247 189398566 - Tomm40l protein_coding retained_intron MGP_CBAJ_T0012116.1 MGP_CBAJ_G0010228.1 mouse_genomes_project 1 153145560 153146197 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012171.1 MGP_CBAJ_G0010283.1 mouse_genomes_project 1 179458949 179459379 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0019618.1 MGP_CBAJ_G0015779.1 mouse_genomes_project 1 60444483 60445875 - MGP_CBAJ_P0019618 Hsfy2 protein_coding protein_coding MGP_CBAJ_T0097881.1 MGP_CBAJ_G0036154.1 mouse_genomes_project 1 165474340 165474481 + n-R5s219 rRNA rRNA MGP_CBAJ_T0023755.1 MGP_CBAJ_G0016646.1 mouse_genomes_project 1 205054318 205068544 - MGP_CBAJ_P0023755 C130074G19Rik protein_coding protein_coding MGP_CBAJ_T0000446.1 MGP_CBAJ_G0000388.1 mouse_genomes_project 1 63688773 63690411 - TEC TEC MGP_CBAJ_T0021757.1 MGP_CBAJ_G0016213.1 mouse_genomes_project 1 145747759 145803496 + MGP_CBAJ_P0021757 Dstyk protein_coding protein_coding MGP_CBAJ_T0021758.1 MGP_CBAJ_G0016213.1 mouse_genomes_project 1 145747808 145800630 + MGP_CBAJ_P0021758 Dstyk protein_coding protein_coding MGP_CBAJ_T0021759.1 MGP_CBAJ_G0016213.1 mouse_genomes_project 1 145748581 145764189 + Dstyk protein_coding processed_transcript MGP_CBAJ_T0021760.1 MGP_CBAJ_G0016213.1 mouse_genomes_project 1 145782290 145784510 + MGP_CBAJ_P0021760 Dstyk protein_coding protein_coding MGP_CBAJ_T0021761.1 MGP_CBAJ_G0016213.1 mouse_genomes_project 1 145787488 145794215 + Dstyk protein_coding retained_intron MGP_CBAJ_T0021762.1 MGP_CBAJ_G0016213.1 mouse_genomes_project 1 145798946 145799894 + Dstyk protein_coding retained_intron MGP_CBAJ_T0019355.1 MGP_CBAJ_G0015730.1 mouse_genomes_project 1 46189399 46201660 - MGP_CBAJ_P0019355 Kdelc1 protein_coding protein_coding MGP_CBAJ_T0019356.1 MGP_CBAJ_G0015730.1 mouse_genomes_project 1 46189738 46201605 - Kdelc1 protein_coding retained_intron MGP_CBAJ_T0019357.1 MGP_CBAJ_G0015730.1 mouse_genomes_project 1 46189740 46201617 - MGP_CBAJ_P0019357 Kdelc1 protein_coding protein_coding MGP_CBAJ_T0019358.1 MGP_CBAJ_G0015730.1 mouse_genomes_project 1 46194935 46201617 - Kdelc1 protein_coding retained_intron MGP_CBAJ_T0019359.1 MGP_CBAJ_G0015730.1 mouse_genomes_project 1 46197635 46201553 - MGP_CBAJ_P0019359 Kdelc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021970.1 MGP_CBAJ_G0016262.1 mouse_genomes_project 1 149018115 149047888 - MGP_CBAJ_P0021970 Rnpep protein_coding protein_coding MGP_CBAJ_T0021971.1 MGP_CBAJ_G0016262.1 mouse_genomes_project 1 149018115 149047888 - MGP_CBAJ_P0021971 Rnpep protein_coding protein_coding MGP_CBAJ_T0021972.1 MGP_CBAJ_G0016262.1 mouse_genomes_project 1 149020608 149022821 - Rnpep protein_coding retained_intron MGP_CBAJ_T0021973.1 MGP_CBAJ_G0016262.1 mouse_genomes_project 1 149022445 149029925 - Rnpep protein_coding processed_transcript MGP_CBAJ_T0021974.1 MGP_CBAJ_G0016262.1 mouse_genomes_project 1 149029836 149032952 - Rnpep protein_coding processed_transcript MGP_CBAJ_T0021975.1 MGP_CBAJ_G0016262.1 mouse_genomes_project 1 149029838 149031220 - Rnpep protein_coding retained_intron MGP_CBAJ_T0021976.1 MGP_CBAJ_G0016262.1 mouse_genomes_project 1 149034062 149041226 - Rnpep protein_coding retained_intron MGP_CBAJ_T0021977.1 MGP_CBAJ_G0016262.1 mouse_genomes_project 1 149041156 149042922 - Rnpep protein_coding retained_intron MGP_CBAJ_T0021978.1 MGP_CBAJ_G0016262.1 mouse_genomes_project 1 149041452 149043725 - Rnpep protein_coding retained_intron MGP_CBAJ_T0005905.1 MGP_CBAJ_G0004942.1 mouse_genomes_project 1 189509009 189514611 - Gm20045 lincRNA lincRNA MGP_CBAJ_T0022325.1 MGP_CBAJ_G0016329.1 mouse_genomes_project 1 168438512 168720700 - MGP_CBAJ_P0022325 Rgl1 protein_coding protein_coding MGP_CBAJ_T0022326.1 MGP_CBAJ_G0016329.1 mouse_genomes_project 1 168438703 168555287 - MGP_CBAJ_P0022326 Rgl1 protein_coding protein_coding MGP_CBAJ_T0022327.1 MGP_CBAJ_G0016329.1 mouse_genomes_project 1 168440510 168720746 - MGP_CBAJ_P0022327 Rgl1 protein_coding protein_coding MGP_CBAJ_T0022328.1 MGP_CBAJ_G0016329.1 mouse_genomes_project 1 168476010 168477547 - Rgl1 protein_coding retained_intron MGP_CBAJ_T0022329.1 MGP_CBAJ_G0016329.1 mouse_genomes_project 1 168482045 168518975 - Rgl1 protein_coding processed_transcript MGP_CBAJ_T0022330.1 MGP_CBAJ_G0016329.1 mouse_genomes_project 1 168482045 168555099 - MGP_CBAJ_P0022330 Rgl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0011766.1 MGP_CBAJ_G0009878.1 mouse_genomes_project 1 11166420 11166741 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021584.1 MGP_CBAJ_G0016170.1 mouse_genomes_project 1 141059355 141121753 - MGP_CBAJ_P0021584 Lct protein_coding protein_coding MGP_CBAJ_T0021585.1 MGP_CBAJ_G0016170.1 mouse_genomes_project 1 141062170 141069068 - Lct protein_coding retained_intron MGP_CBAJ_T0016748.1 MGP_CBAJ_G0014840.1 mouse_genomes_project 1 80957664 80987994 + Gm16582 processed_transcript processed_transcript MGP_CBAJ_T0012054.1 MGP_CBAJ_G0010166.1 mouse_genomes_project 1 122871470 122872033 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0019227.1 MGP_CBAJ_G0015702.1 mouse_genomes_project 1 41047768 41075829 - MGP_CBAJ_P0019227 Rnf149 protein_coding protein_coding MGP_CBAJ_T0019228.1 MGP_CBAJ_G0015702.1 mouse_genomes_project 1 41048936 41075780 - MGP_CBAJ_P0019228 Rnf149 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019229.1 MGP_CBAJ_G0015702.1 mouse_genomes_project 1 41052066 41055219 - Rnf149 protein_coding retained_intron MGP_CBAJ_T0019230.1 MGP_CBAJ_G0015702.1 mouse_genomes_project 1 41061554 41075727 - MGP_CBAJ_P0019230 Rnf149 protein_coding protein_coding MGP_CBAJ_T0000673.1 MGP_CBAJ_G0000613.1 mouse_genomes_project 1 176402588 176404825 + TEC TEC MGP_CBAJ_T0019207.1 MGP_CBAJ_G0015696.1 mouse_genomes_project 1 40349412 40360516 + MGP_CBAJ_P0019207 Nms protein_coding protein_coding MGP_CBAJ_T0019208.1 MGP_CBAJ_G0015696.1 mouse_genomes_project 1 40349466 40358883 + MGP_CBAJ_P0019208 Nms protein_coding protein_coding MGP_CBAJ_T0020548.1 MGP_CBAJ_G0015944.1 mouse_genomes_project 1 85168838 85185494 + MGP_CBAJ_P0020548 Utp14b protein_coding protein_coding MGP_CBAJ_T0020549.1 MGP_CBAJ_G0015944.1 mouse_genomes_project 1 85169240 85178385 + MGP_CBAJ_P0020549 Utp14b protein_coding protein_coding MGP_CBAJ_T0097871.1 MGP_CBAJ_G0036144.1 mouse_genomes_project 1 90239604 90239725 - n-R5s214 rRNA rRNA MGP_CBAJ_T0020546.1 MGP_CBAJ_G0015943.1 mouse_genomes_project 1 85168625 85225163 + MGP_CBAJ_P0020546 Acsl3 protein_coding protein_coding MGP_CBAJ_T0020547.1 MGP_CBAJ_G0015943.1 mouse_genomes_project 1 85168683 85224387 + MGP_CBAJ_P0020547 Acsl3 protein_coding protein_coding MGP_CBAJ_T0020550.1 MGP_CBAJ_G0015943.1 mouse_genomes_project 1 85184874 85202451 + MGP_CBAJ_P0020550 Acsl3 protein_coding protein_coding MGP_CBAJ_T0020551.1 MGP_CBAJ_G0015943.1 mouse_genomes_project 1 85195421 85225167 + MGP_CBAJ_P0020551 Acsl3 protein_coding protein_coding MGP_CBAJ_T0020552.1 MGP_CBAJ_G0015943.1 mouse_genomes_project 1 85195695 85206376 + Acsl3 protein_coding retained_intron MGP_CBAJ_T0020553.1 MGP_CBAJ_G0015943.1 mouse_genomes_project 1 85204431 85214449 + Acsl3 protein_coding retained_intron MGP_CBAJ_T0020554.1 MGP_CBAJ_G0015943.1 mouse_genomes_project 1 85214075 85218709 + Acsl3 protein_coding retained_intron MGP_CBAJ_T0002831.1 MGP_CBAJ_G0002668.1 mouse_genomes_project 1 149383664 149398855 + Gm4793 antisense antisense MGP_CBAJ_T0011860.1 MGP_CBAJ_G0009972.1 mouse_genomes_project 1 46310500 46315219 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000591.1 MGP_CBAJ_G0000533.1 mouse_genomes_project 1 143907413 143909092 - TEC TEC MGP_CBAJ_T0098521.1 MGP_CBAJ_G0036776.1 mouse_genomes_project 1 33867695 33867805 + Gm24901 snRNA snRNA MGP_CBAJ_T0011731.1 MGP_CBAJ_G0009843.1 mouse_genomes_project 1 3806218 3806844 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002880.1 MGP_CBAJ_G0002707.1 mouse_genomes_project 1 189067559 189071933 + Gm38204 antisense antisense MGP_CBAJ_T0098229.1 MGP_CBAJ_G0036502.1 mouse_genomes_project 1 55853861 55856352 - Gm29670 sense_intronic sense_intronic MGP_CBAJ_T0023603.1 MGP_CBAJ_G0016613.1 mouse_genomes_project 1 200599081 200602869 + MGP_CBAJ_P0023603 Pycr2 protein_coding protein_coding MGP_CBAJ_T0023604.1 MGP_CBAJ_G0016613.1 mouse_genomes_project 1 200599097 200601409 + Pycr2 protein_coding retained_intron MGP_CBAJ_T0023605.1 MGP_CBAJ_G0016613.1 mouse_genomes_project 1 200599111 200602868 + Pycr2 protein_coding retained_intron MGP_CBAJ_T0023606.1 MGP_CBAJ_G0016613.1 mouse_genomes_project 1 200600704 200601692 + Pycr2 protein_coding retained_intron MGP_CBAJ_T0005811.1 MGP_CBAJ_G0004866.1 mouse_genomes_project 1 143548205 143555584 - Gm15675 lincRNA lincRNA MGP_CBAJ_T0000585.1 MGP_CBAJ_G0000527.1 mouse_genomes_project 1 142683278 142685959 + TEC TEC MGP_CBAJ_T0098519.1 MGP_CBAJ_G0036774.1 mouse_genomes_project 1 32761007 32761114 - Gm25814 snRNA snRNA MGP_CBAJ_T0002789.1 MGP_CBAJ_G0002639.1 mouse_genomes_project 1 101307696 101332858 - 9430060I03Rik antisense antisense MGP_CBAJ_T0022348.1 MGP_CBAJ_G0016334.1 mouse_genomes_project 1 168932088 169131419 + MGP_CBAJ_P0022348 Nmnat2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022349.1 MGP_CBAJ_G0016334.1 mouse_genomes_project 1 168932093 169131516 + MGP_CBAJ_P0022349 Nmnat2 protein_coding protein_coding MGP_CBAJ_T0022350.1 MGP_CBAJ_G0016334.1 mouse_genomes_project 1 168932136 169099362 + MGP_CBAJ_P0022350 Nmnat2 protein_coding protein_coding MGP_CBAJ_T0022351.1 MGP_CBAJ_G0016334.1 mouse_genomes_project 1 168932369 169078260 + Nmnat2 protein_coding processed_transcript MGP_CBAJ_T0022352.1 MGP_CBAJ_G0016334.1 mouse_genomes_project 1 169026889 169075573 + Nmnat2 protein_coding retained_intron MGP_CBAJ_T0022353.1 MGP_CBAJ_G0016334.1 mouse_genomes_project 1 169098753 169099871 + Nmnat2 protein_coding processed_transcript MGP_CBAJ_T0016825.1 MGP_CBAJ_G0014861.1 mouse_genomes_project 1 183331108 183342290 + Gm16565 processed_transcript sense_overlapping MGP_CBAJ_T0016826.1 MGP_CBAJ_G0014861.1 mouse_genomes_project 1 183331232 183332201 + Gm16565 processed_transcript processed_transcript MGP_CBAJ_T0000352.1 MGP_CBAJ_G0000297.1 mouse_genomes_project 1 11493123 11495373 - TEC TEC MGP_CBAJ_T0011997.1 MGP_CBAJ_G0010109.1 mouse_genomes_project 1 94659022 94664052 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101447.1 MGP_CBAJ_G0039479.1 mouse_genomes_project 1 55250306 55251194 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0000582.1 MGP_CBAJ_G0000524.1 mouse_genomes_project 1 140926925 140928240 + TEC TEC MGP_CBAJ_T0000660.1 MGP_CBAJ_G0000600.1 mouse_genomes_project 1 172973223 172982596 + TEC TEC MGP_CBAJ_T0022503.1 MGP_CBAJ_G0016364.1 mouse_genomes_project 1 172657051 172786688 - MGP_CBAJ_P0022503 Axdnd1 protein_coding protein_coding MGP_CBAJ_T0022504.1 MGP_CBAJ_G0016364.1 mouse_genomes_project 1 172657051 172781139 - MGP_CBAJ_P0022504 Axdnd1 protein_coding protein_coding MGP_CBAJ_T0022505.1 MGP_CBAJ_G0016364.1 mouse_genomes_project 1 172664315 172781211 - MGP_CBAJ_P0022505 Axdnd1 protein_coding unknown_likely_coding MGP_CBAJ_T0022506.1 MGP_CBAJ_G0016364.1 mouse_genomes_project 1 172664315 172782257 - MGP_CBAJ_P0022506 Axdnd1 protein_coding unknown_likely_coding MGP_CBAJ_T0022507.1 MGP_CBAJ_G0016364.1 mouse_genomes_project 1 172698618 172717058 - Axdnd1 protein_coding processed_transcript MGP_CBAJ_T0022508.1 MGP_CBAJ_G0016364.1 mouse_genomes_project 1 172706084 172751294 - Axdnd1 protein_coding processed_transcript MGP_CBAJ_T0022509.1 MGP_CBAJ_G0016364.1 mouse_genomes_project 1 172706677 172749847 - MGP_CBAJ_P0022509 Axdnd1 protein_coding protein_coding MGP_CBAJ_T0022510.1 MGP_CBAJ_G0016364.1 mouse_genomes_project 1 172751354 172756736 - Axdnd1 protein_coding processed_transcript MGP_CBAJ_T0022511.1 MGP_CBAJ_G0016364.1 mouse_genomes_project 1 172781189 172782715 - MGP_CBAJ_P0022511 Axdnd1 protein_coding protein_coding MGP_CBAJ_T0022512.1 MGP_CBAJ_G0016364.1 mouse_genomes_project 1 172781189 172782751 - MGP_CBAJ_P0022512 Axdnd1 protein_coding protein_coding MGP_CBAJ_T0022835.1 MGP_CBAJ_G0016425.1 mouse_genomes_project 1 181682450 181827252 + MGP_CBAJ_P0022835 Nme7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022837.1 MGP_CBAJ_G0016425.1 mouse_genomes_project 1 181686001 181826827 + MGP_CBAJ_P0022837 Nme7 protein_coding protein_coding MGP_CBAJ_T0022838.1 MGP_CBAJ_G0016425.1 mouse_genomes_project 1 181686056 181729764 + Nme7 protein_coding processed_transcript MGP_CBAJ_T0022839.1 MGP_CBAJ_G0016425.1 mouse_genomes_project 1 181686077 181691463 + Nme7 protein_coding retained_intron MGP_CBAJ_T0022840.1 MGP_CBAJ_G0016425.1 mouse_genomes_project 1 181686402 181826821 + MGP_CBAJ_P0022840 Nme7 protein_coding protein_coding MGP_CBAJ_T0022841.1 MGP_CBAJ_G0016425.1 mouse_genomes_project 1 181686426 181714536 + Nme7 protein_coding retained_intron MGP_CBAJ_T0022842.1 MGP_CBAJ_G0016425.1 mouse_genomes_project 1 181691174 181728510 + MGP_CBAJ_P0022842 Nme7 protein_coding protein_coding MGP_CBAJ_T0022843.1 MGP_CBAJ_G0016425.1 mouse_genomes_project 1 181725547 181763089 + Nme7 protein_coding retained_intron MGP_CBAJ_T0022844.1 MGP_CBAJ_G0016425.1 mouse_genomes_project 1 181755499 181826763 + Nme7 protein_coding processed_transcript MGP_CBAJ_T0022845.1 MGP_CBAJ_G0016425.1 mouse_genomes_project 1 181755499 181826819 + Nme7 protein_coding processed_transcript MGP_CBAJ_T0023590.1 MGP_CBAJ_G0016608.1 mouse_genomes_project 1 200345363 200349279 - MGP_CBAJ_P0023590 Mixl1 protein_coding protein_coding MGP_CBAJ_T0022597.1 MGP_CBAJ_G0016378.1 mouse_genomes_project 1 176002853 176025085 + MGP_CBAJ_P0022597 Rfwd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022598.1 MGP_CBAJ_G0016378.1 mouse_genomes_project 1 176002855 176135790 + MGP_CBAJ_P0022598 Rfwd2 protein_coding protein_coding MGP_CBAJ_T0022599.1 MGP_CBAJ_G0016378.1 mouse_genomes_project 1 176003788 176067967 + MGP_CBAJ_P0022599 Rfwd2 protein_coding protein_coding MGP_CBAJ_T0022600.1 MGP_CBAJ_G0016378.1 mouse_genomes_project 1 176003830 176025108 + MGP_CBAJ_P0022600 Rfwd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022601.1 MGP_CBAJ_G0016378.1 mouse_genomes_project 1 176010856 176042296 + Rfwd2 protein_coding retained_intron MGP_CBAJ_T0022602.1 MGP_CBAJ_G0016378.1 mouse_genomes_project 1 176024213 176086751 + MGP_CBAJ_P0022602 Rfwd2 protein_coding protein_coding MGP_CBAJ_T0022603.1 MGP_CBAJ_G0016378.1 mouse_genomes_project 1 176033930 176088642 + MGP_CBAJ_P0022603 Rfwd2 protein_coding protein_coding MGP_CBAJ_T0022604.1 MGP_CBAJ_G0016378.1 mouse_genomes_project 1 176042043 176053048 + Rfwd2 protein_coding retained_intron MGP_CBAJ_T0022605.1 MGP_CBAJ_G0016378.1 mouse_genomes_project 1 176086789 176090855 + Rfwd2 protein_coding retained_intron MGP_CBAJ_T0022606.1 MGP_CBAJ_G0016378.1 mouse_genomes_project 1 176086800 176109762 + MGP_CBAJ_P0022606 Rfwd2 protein_coding protein_coding MGP_CBAJ_T0022607.1 MGP_CBAJ_G0016378.1 mouse_genomes_project 1 176088587 176109843 + Rfwd2 protein_coding retained_intron MGP_CBAJ_T0022608.1 MGP_CBAJ_G0016378.1 mouse_genomes_project 1 176105721 176110691 + Rfwd2 protein_coding retained_intron MGP_CBAJ_T0022609.1 MGP_CBAJ_G0016378.1 mouse_genomes_project 1 176130477 176133217 + Rfwd2 protein_coding retained_intron MGP_CBAJ_T0000338.1 MGP_CBAJ_G0000283.1 mouse_genomes_project 1 6969339 6972604 + TEC TEC MGP_CBAJ_T0019728.1 MGP_CBAJ_G0015799.1 mouse_genomes_project 1 62808459 62812593 + Cflar protein_coding processed_transcript MGP_CBAJ_T0019729.1 MGP_CBAJ_G0015799.1 mouse_genomes_project 1 62808459 62858065 + Cflar protein_coding processed_transcript MGP_CBAJ_T0019730.1 MGP_CBAJ_G0015799.1 mouse_genomes_project 1 62808467 62813010 + Cflar protein_coding processed_transcript MGP_CBAJ_T0019731.1 MGP_CBAJ_G0015799.1 mouse_genomes_project 1 62808485 62812596 + Cflar protein_coding processed_transcript MGP_CBAJ_T0019732.1 MGP_CBAJ_G0015799.1 mouse_genomes_project 1 62808495 62816258 + Cflar protein_coding processed_transcript MGP_CBAJ_T0019733.1 MGP_CBAJ_G0015799.1 mouse_genomes_project 1 62808502 62857700 + MGP_CBAJ_P0019733 Cflar protein_coding protein_coding MGP_CBAJ_T0019734.1 MGP_CBAJ_G0015799.1 mouse_genomes_project 1 62812000 62837110 + MGP_CBAJ_P0019734 Cflar protein_coding protein_coding MGP_CBAJ_T0019735.1 MGP_CBAJ_G0015799.1 mouse_genomes_project 1 62812008 62821774 + Cflar protein_coding processed_transcript MGP_CBAJ_T0019736.1 MGP_CBAJ_G0015799.1 mouse_genomes_project 1 62812023 62858889 + MGP_CBAJ_P0019736 Cflar protein_coding protein_coding MGP_CBAJ_T0019737.1 MGP_CBAJ_G0015799.1 mouse_genomes_project 1 62812345 62862689 + MGP_CBAJ_P0019737 Cflar protein_coding protein_coding MGP_CBAJ_T0019738.1 MGP_CBAJ_G0015799.1 mouse_genomes_project 1 62812592 62816266 + Cflar protein_coding retained_intron MGP_CBAJ_T0019739.1 MGP_CBAJ_G0015799.1 mouse_genomes_project 1 62834517 62856177 + Cflar protein_coding processed_transcript MGP_CBAJ_T0023865.1 MGP_CBAJ_G0016668.1 mouse_genomes_project 1 211806015 211830411 + MGP_CBAJ_P0023865 Angel2 protein_coding protein_coding MGP_CBAJ_T0023866.1 MGP_CBAJ_G0016668.1 mouse_genomes_project 1 211809394 211821889 + Angel2 protein_coding retained_intron MGP_CBAJ_T0023867.1 MGP_CBAJ_G0016668.1 mouse_genomes_project 1 211809394 211830411 + MGP_CBAJ_P0023867 Angel2 protein_coding protein_coding MGP_CBAJ_T0023868.1 MGP_CBAJ_G0016668.1 mouse_genomes_project 1 211809394 211830411 + MGP_CBAJ_P0023868 Angel2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023869.1 MGP_CBAJ_G0016668.1 mouse_genomes_project 1 211809394 211830411 + MGP_CBAJ_P0023869 Angel2 protein_coding protein_coding MGP_CBAJ_T0023870.1 MGP_CBAJ_G0016668.1 mouse_genomes_project 1 211812285 211821156 + MGP_CBAJ_P0023870 Angel2 protein_coding protein_coding MGP_CBAJ_T0023871.1 MGP_CBAJ_G0016668.1 mouse_genomes_project 1 211812308 211830411 + Angel2 protein_coding processed_transcript MGP_CBAJ_T0023872.1 MGP_CBAJ_G0016668.1 mouse_genomes_project 1 211812313 211820931 + MGP_CBAJ_P0023872 Angel2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023873.1 MGP_CBAJ_G0016668.1 mouse_genomes_project 1 211812315 211821459 + Angel2 protein_coding retained_intron MGP_CBAJ_T0023874.1 MGP_CBAJ_G0016668.1 mouse_genomes_project 1 211820705 211822723 + Angel2 protein_coding retained_intron MGP_CBAJ_T0022342.1 MGP_CBAJ_G0016333.1 mouse_genomes_project 1 168804794 168877018 - MGP_CBAJ_P0022342 Smg7 protein_coding protein_coding MGP_CBAJ_T0022343.1 MGP_CBAJ_G0016333.1 mouse_genomes_project 1 168804795 168847660 - MGP_CBAJ_P0022343 Smg7 protein_coding protein_coding MGP_CBAJ_T0022344.1 MGP_CBAJ_G0016333.1 mouse_genomes_project 1 168806669 168877042 - MGP_CBAJ_P0022344 Smg7 protein_coding protein_coding MGP_CBAJ_T0022345.1 MGP_CBAJ_G0016333.1 mouse_genomes_project 1 168813061 168840652 - Smg7 protein_coding processed_transcript MGP_CBAJ_T0022346.1 MGP_CBAJ_G0016333.1 mouse_genomes_project 1 168813083 168816782 - Smg7 protein_coding processed_transcript MGP_CBAJ_T0022347.1 MGP_CBAJ_G0016333.1 mouse_genomes_project 1 168813702 168816697 - Smg7 protein_coding retained_intron MGP_CBAJ_T0098599.1 MGP_CBAJ_G0036854.1 mouse_genomes_project 1 213813785 213813901 + Gm22265 snRNA snRNA MGP_CBAJ_T0002726.1 MGP_CBAJ_G0002590.1 mouse_genomes_project 1 42346551 42352743 - Gm37623 antisense antisense MGP_CBAJ_T0020953.1 MGP_CBAJ_G0016037.1 mouse_genomes_project 1 98716969 98726608 + Cops8 protein_coding retained_intron MGP_CBAJ_T0020954.1 MGP_CBAJ_G0016037.1 mouse_genomes_project 1 98716971 98724951 + Cops8 protein_coding retained_intron MGP_CBAJ_T0020955.1 MGP_CBAJ_G0016037.1 mouse_genomes_project 1 98716992 98719145 + Cops8 protein_coding retained_intron MGP_CBAJ_T0020956.1 MGP_CBAJ_G0016037.1 mouse_genomes_project 1 98716992 98724522 + Cops8 protein_coding processed_transcript MGP_CBAJ_T0020957.1 MGP_CBAJ_G0016037.1 mouse_genomes_project 1 98717021 98725665 + MGP_CBAJ_P0020957 Cops8 protein_coding protein_coding MGP_CBAJ_T0020958.1 MGP_CBAJ_G0016037.1 mouse_genomes_project 1 98717043 98726825 + MGP_CBAJ_P0020958 Cops8 protein_coding protein_coding MGP_CBAJ_T0020959.1 MGP_CBAJ_G0016037.1 mouse_genomes_project 1 98723138 98724813 + Cops8 protein_coding retained_intron MGP_CBAJ_T0020960.1 MGP_CBAJ_G0016037.1 mouse_genomes_project 1 98724830 98725878 + Cops8 protein_coding retained_intron MGP_CBAJ_T0021955.1 MGP_CBAJ_G0016257.1 mouse_genomes_project 1 148686501 148825361 - MGP_CBAJ_P0021955 Lgr6 protein_coding protein_coding MGP_CBAJ_T0021956.1 MGP_CBAJ_G0016257.1 mouse_genomes_project 1 148690108 148825087 - MGP_CBAJ_P0021956 Lgr6 protein_coding protein_coding MGP_CBAJ_T0021957.1 MGP_CBAJ_G0016257.1 mouse_genomes_project 1 148706352 148735985 - Lgr6 protein_coding processed_transcript MGP_CBAJ_T0002877.1 MGP_CBAJ_G0002705.1 mouse_genomes_project 1 187926768 187929747 + 3110045C21Rik antisense antisense MGP_CBAJ_T0002878.1 MGP_CBAJ_G0002705.1 mouse_genomes_project 1 187926811 187929721 + 3110045C21Rik antisense antisense MGP_CBAJ_T0021468.1 MGP_CBAJ_G0016149.1 mouse_genomes_project 1 132418908 132449303 - MGP_CBAJ_P0021468 Marco protein_coding protein_coding MGP_CBAJ_T0021469.1 MGP_CBAJ_G0016149.1 mouse_genomes_project 1 132435197 132449035 - MGP_CBAJ_P0021469 Marco protein_coding protein_coding MGP_CBAJ_T0018542.1 MGP_CBAJ_G0015568.1 mouse_genomes_project 1 7267174 7269061 + MGP_CBAJ_P0018542 Rrs1 protein_coding protein_coding MGP_CBAJ_T0002847.1 MGP_CBAJ_G0002680.1 mouse_genomes_project 1 169776935 169779167 - Gm29529 antisense antisense MGP_CBAJ_T0020796.1 MGP_CBAJ_G0016000.1 mouse_genomes_project 1 94728283 94733376 + MGP_CBAJ_P0020796 Prss56 protein_coding protein_coding MGP_CBAJ_T0005683.1 MGP_CBAJ_G0004766.1 mouse_genomes_project 1 74887210 74890239 + Gm28497 lincRNA lincRNA MGP_CBAJ_T0021629.1 MGP_CBAJ_G0016183.1 mouse_genomes_project 1 144025904 144051414 + MGP_CBAJ_P0021629 Pigr protein_coding protein_coding MGP_CBAJ_T0021630.1 MGP_CBAJ_G0016183.1 mouse_genomes_project 1 144026108 144043876 + MGP_CBAJ_P0021630 Pigr protein_coding protein_coding MGP_CBAJ_T0021631.1 MGP_CBAJ_G0016183.1 mouse_genomes_project 1 144028235 144043844 + MGP_CBAJ_P0021631 Pigr protein_coding protein_coding MGP_CBAJ_T0023128.1 MGP_CBAJ_G0016491.1 mouse_genomes_project 1 189462003 189467188 - Ppox protein_coding retained_intron MGP_CBAJ_T0023129.1 MGP_CBAJ_G0016491.1 mouse_genomes_project 1 189462974 189467188 - Ppox protein_coding retained_intron MGP_CBAJ_T0023130.1 MGP_CBAJ_G0016491.1 mouse_genomes_project 1 189462974 189467188 - MGP_CBAJ_P0023130 Ppox protein_coding protein_coding MGP_CBAJ_T0023131.1 MGP_CBAJ_G0016491.1 mouse_genomes_project 1 189463429 189466761 - MGP_CBAJ_P0023131 Ppox protein_coding protein_coding MGP_CBAJ_T0023132.1 MGP_CBAJ_G0016491.1 mouse_genomes_project 1 189464117 189465814 - Ppox protein_coding retained_intron MGP_CBAJ_T0023133.1 MGP_CBAJ_G0016491.1 mouse_genomes_project 1 189465847 189466523 - Ppox protein_coding processed_transcript MGP_CBAJ_T0023134.1 MGP_CBAJ_G0016491.1 mouse_genomes_project 1 189466094 189467188 - Ppox protein_coding retained_intron MGP_CBAJ_T0023135.1 MGP_CBAJ_G0016491.1 mouse_genomes_project 1 189466365 189467121 - Ppox protein_coding retained_intron MGP_CBAJ_T0011768.1 MGP_CBAJ_G0009880.1 mouse_genomes_project 1 11943518 11944522 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018970.1 MGP_CBAJ_G0015656.1 mouse_genomes_project 1 35464931 35477433 + MGP_CBAJ_P0018970 Amer3 protein_coding protein_coding MGP_CBAJ_T0000328.1 MGP_CBAJ_G0000273.1 mouse_genomes_project 1 2033697 2034879 - TEC TEC MGP_CBAJ_T0012117.1 MGP_CBAJ_G0010229.1 mouse_genomes_project 1 153154894 153155450 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005974.1 MGP_CBAJ_G0004994.1 mouse_genomes_project 1 214626978 214629908 - 4631405K08Rik lincRNA lincRNA MGP_CBAJ_T0022954.1 MGP_CBAJ_G0016447.1 mouse_genomes_project 1 184078275 184094493 - MGP_CBAJ_P0022954 Gm4846 protein_coding protein_coding MGP_CBAJ_T0000385.1 MGP_CBAJ_G0000328.1 mouse_genomes_project 1 25360134 25364684 - TEC TEC MGP_CBAJ_T0002887.1 MGP_CBAJ_G0002713.1 mouse_genomes_project 1 190559039 190560039 + Gm37950 antisense antisense MGP_CBAJ_T0000776.1 MGP_CBAJ_G0000713.1 mouse_genomes_project 1 216486611 216491236 - TEC TEC MGP_CBAJ_T0101505.1 MGP_CBAJ_G0039537.1 mouse_genomes_project 1 195929054 195929214 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0012123.1 MGP_CBAJ_G0010235.1 mouse_genomes_project 1 157412250 157413486 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011924.1 MGP_CBAJ_G0010036.1 mouse_genomes_project 1 64958580 64958997 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000501.1 MGP_CBAJ_G0000443.1 mouse_genomes_project 1 88977926 88979733 + TEC TEC MGP_CBAJ_T0098587.1 MGP_CBAJ_G0036842.1 mouse_genomes_project 1 189987236 189987343 - Gm22950 snRNA snRNA MGP_CBAJ_T0022274.1 MGP_CBAJ_G0016320.1 mouse_genomes_project 1 167145494 167165461 + MGP_CBAJ_P0022274 Ivns1abp protein_coding protein_coding MGP_CBAJ_T0022275.1 MGP_CBAJ_G0016320.1 mouse_genomes_project 1 167145526 167157844 + MGP_CBAJ_P0022275 Ivns1abp protein_coding protein_coding MGP_CBAJ_T0022276.1 MGP_CBAJ_G0016320.1 mouse_genomes_project 1 167145535 167165454 + MGP_CBAJ_P0022276 Ivns1abp protein_coding protein_coding MGP_CBAJ_T0022277.1 MGP_CBAJ_G0016320.1 mouse_genomes_project 1 167145601 167164404 + MGP_CBAJ_P0022277 Ivns1abp protein_coding nonsense_mediated_decay MGP_CBAJ_T0022278.1 MGP_CBAJ_G0016320.1 mouse_genomes_project 1 167162284 167163072 + MGP_CBAJ_P0022278 Ivns1abp protein_coding protein_coding MGP_CBAJ_T0005880.1 MGP_CBAJ_G0004921.1 mouse_genomes_project 1 181509642 181514402 - Gm16548 lincRNA lincRNA MGP_CBAJ_T0000434.1 MGP_CBAJ_G0000376.1 mouse_genomes_project 1 54601482 54603853 - TEC TEC MGP_CBAJ_T0005700.1 MGP_CBAJ_G0004776.1 mouse_genomes_project 1 79338056 79376194 + D530049I02Rik lincRNA lincRNA MGP_CBAJ_T0020312.1 MGP_CBAJ_G0015909.1 mouse_genomes_project 1 81016931 81052678 - MGP_CBAJ_P0020312 Ccdc108 protein_coding protein_coding MGP_CBAJ_T0020313.1 MGP_CBAJ_G0015909.1 mouse_genomes_project 1 81039861 81052673 - Ccdc108 protein_coding retained_intron MGP_CBAJ_T0020314.1 MGP_CBAJ_G0015909.1 mouse_genomes_project 1 81040950 81052671 - Ccdc108 protein_coding retained_intron MGP_CBAJ_T0019289.1 MGP_CBAJ_G0015716.1 mouse_genomes_project 1 42486363 42542284 + MGP_CBAJ_P0019289 Tmem182 protein_coding protein_coding MGP_CBAJ_T0019338.1 MGP_CBAJ_G0015727.1 mouse_genomes_project 1 46078438 46089037 - MGP_CBAJ_P0019338 Mettl21c protein_coding protein_coding MGP_CBAJ_T0019339.1 MGP_CBAJ_G0015727.1 mouse_genomes_project 1 46078965 46086499 - Mettl21c protein_coding processed_transcript MGP_CBAJ_T0019340.1 MGP_CBAJ_G0015727.1 mouse_genomes_project 1 46079540 46089065 - Mettl21c protein_coding retained_intron MGP_CBAJ_T0023621.1 MGP_CBAJ_G0016617.1 mouse_genomes_project 1 200764988 200774384 + MGP_CBAJ_P0023621 9130409I23Rik protein_coding protein_coding MGP_CBAJ_T0011923.1 MGP_CBAJ_G0010035.1 mouse_genomes_project 1 64944382 64944639 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000598.1 MGP_CBAJ_G0000540.1 mouse_genomes_project 1 146553099 146556184 - TEC TEC MGP_CBAJ_T0000599.1 MGP_CBAJ_G0000540.1 mouse_genomes_project 1 146555581 146556184 - TEC TEC MGP_CBAJ_T0021604.1 MGP_CBAJ_G0016175.1 mouse_genomes_project 1 143559019 143614590 - MGP_CBAJ_P0021604 Cd55b protein_coding protein_coding MGP_CBAJ_T0018798.1 MGP_CBAJ_G0015621.1 mouse_genomes_project 1 20222217 20247276 + MGP_CBAJ_P0018798 Gsta3 protein_coding protein_coding MGP_CBAJ_T0018799.1 MGP_CBAJ_G0015621.1 mouse_genomes_project 1 20222235 20246636 + MGP_CBAJ_P0018799 Gsta3 protein_coding protein_coding MGP_CBAJ_T0018800.1 MGP_CBAJ_G0015621.1 mouse_genomes_project 1 20222257 20246461 + MGP_CBAJ_P0018800 Gsta3 protein_coding protein_coding MGP_CBAJ_T0018801.1 MGP_CBAJ_G0015621.1 mouse_genomes_project 1 20231382 20246577 + MGP_CBAJ_P0018801 Gsta3 protein_coding unknown_likely_coding MGP_CBAJ_T0018802.1 MGP_CBAJ_G0015621.1 mouse_genomes_project 1 20235131 20237923 + Gsta3 protein_coding retained_intron MGP_CBAJ_T0000359.1 MGP_CBAJ_G0000304.1 mouse_genomes_project 1 14242089 14245258 + TEC TEC MGP_CBAJ_T0016836.1 MGP_CBAJ_G0014867.1 mouse_genomes_project 1 216214662 216267138 + A330023F24Rik processed_transcript lincRNA MGP_CBAJ_T0016837.1 MGP_CBAJ_G0014867.1 mouse_genomes_project 1 216214672 216273073 + A330023F24Rik processed_transcript retained_intron MGP_CBAJ_T0016838.1 MGP_CBAJ_G0014867.1 mouse_genomes_project 1 216259487 216282731 + A330023F24Rik processed_transcript lincRNA MGP_CBAJ_T0016839.1 MGP_CBAJ_G0014867.1 mouse_genomes_project 1 216269753 216283706 + A330023F24Rik processed_transcript retained_intron MGP_CBAJ_T0000331.1 MGP_CBAJ_G0000276.1 mouse_genomes_project 1 2716438 2718471 + TEC TEC MGP_CBAJ_T0009374.1 MGP_CBAJ_G0007512.1 mouse_genomes_project 1 65042675 65042781 - Gm23762 miRNA miRNA MGP_CBAJ_T0021627.1 MGP_CBAJ_G0016182.1 mouse_genomes_project 1 144000202 144014001 + MGP_CBAJ_P0021627 Fcamr protein_coding protein_coding MGP_CBAJ_T0021628.1 MGP_CBAJ_G0016182.1 mouse_genomes_project 1 144000202 144013969 + MGP_CBAJ_P0021628 Fcamr protein_coding protein_coding MGP_CBAJ_T0099782.1 MGP_CBAJ_G0038037.1 mouse_genomes_project 1 112086282 112086381 - Gm23036 snoRNA snoRNA MGP_CBAJ_T0005707.1 MGP_CBAJ_G0004780.1 mouse_genomes_project 1 79722018 79821600 - Gm29183 lincRNA lincRNA MGP_CBAJ_T0020275.1 MGP_CBAJ_G0015900.1 mouse_genomes_project 1 80673926 80716471 + MGP_CBAJ_P0020275 Stk36 protein_coding protein_coding MGP_CBAJ_T0020276.1 MGP_CBAJ_G0015900.1 mouse_genomes_project 1 80673961 80716468 + Stk36 protein_coding retained_intron MGP_CBAJ_T0020277.1 MGP_CBAJ_G0015900.1 mouse_genomes_project 1 80673984 80713677 + MGP_CBAJ_P0020277 Stk36 protein_coding protein_coding MGP_CBAJ_T0020278.1 MGP_CBAJ_G0015900.1 mouse_genomes_project 1 80673995 80678234 + MGP_CBAJ_P0020278 Stk36 protein_coding protein_coding MGP_CBAJ_T0020279.1 MGP_CBAJ_G0015900.1 mouse_genomes_project 1 80674120 80715620 + MGP_CBAJ_P0020279 Stk36 protein_coding protein_coding MGP_CBAJ_T0020280.1 MGP_CBAJ_G0015900.1 mouse_genomes_project 1 80675918 80681117 + MGP_CBAJ_P0020280 Stk36 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020281.1 MGP_CBAJ_G0015900.1 mouse_genomes_project 1 80701117 80704679 + Stk36 protein_coding retained_intron MGP_CBAJ_T0020282.1 MGP_CBAJ_G0015900.1 mouse_genomes_project 1 80701594 80715663 + Stk36 protein_coding processed_transcript MGP_CBAJ_T0020283.1 MGP_CBAJ_G0015900.1 mouse_genomes_project 1 80705232 80716471 + Stk36 protein_coding retained_intron MGP_CBAJ_T0009405.1 MGP_CBAJ_G0007543.1 mouse_genomes_project 1 105228603 105228713 + Gm22917 miRNA miRNA MGP_CBAJ_T0002890.1 MGP_CBAJ_G0002716.1 mouse_genomes_project 1 195992733 195997446 - Gm15423 antisense antisense MGP_CBAJ_T0021564.1 MGP_CBAJ_G0016168.1 mouse_genomes_project 1 140863879 140946840 + R3hdm1 protein_coding retained_intron MGP_CBAJ_T0021565.1 MGP_CBAJ_G0016168.1 mouse_genomes_project 1 140863899 140942842 + MGP_CBAJ_P0021565 R3hdm1 protein_coding protein_coding MGP_CBAJ_T0021566.1 MGP_CBAJ_G0016168.1 mouse_genomes_project 1 140863902 141006944 + MGP_CBAJ_P0021566 R3hdm1 protein_coding protein_coding MGP_CBAJ_T0021567.1 MGP_CBAJ_G0016168.1 mouse_genomes_project 1 140863902 140952556 + MGP_CBAJ_P0021567 R3hdm1 protein_coding protein_coding MGP_CBAJ_T0021568.1 MGP_CBAJ_G0016168.1 mouse_genomes_project 1 140863909 140873515 + R3hdm1 protein_coding retained_intron MGP_CBAJ_T0021569.1 MGP_CBAJ_G0016168.1 mouse_genomes_project 1 140904211 140950605 + MGP_CBAJ_P0021569 R3hdm1 protein_coding protein_coding MGP_CBAJ_T0021570.1 MGP_CBAJ_G0016168.1 mouse_genomes_project 1 140904234 140915579 + MGP_CBAJ_P0021570 R3hdm1 protein_coding protein_coding MGP_CBAJ_T0021571.1 MGP_CBAJ_G0016168.1 mouse_genomes_project 1 140914066 140942895 + MGP_CBAJ_P0021571 R3hdm1 protein_coding protein_coding MGP_CBAJ_T0021572.1 MGP_CBAJ_G0016168.1 mouse_genomes_project 1 140935346 140941854 + R3hdm1 protein_coding retained_intron MGP_CBAJ_T0021573.1 MGP_CBAJ_G0016168.1 mouse_genomes_project 1 140938409 140942830 + R3hdm1 protein_coding retained_intron MGP_CBAJ_T0021574.1 MGP_CBAJ_G0016168.1 mouse_genomes_project 1 140940547 140952356 + R3hdm1 protein_coding retained_intron MGP_CBAJ_T0021575.1 MGP_CBAJ_G0016168.1 mouse_genomes_project 1 140942855 140957206 + MGP_CBAJ_P0021575 R3hdm1 protein_coding protein_coding MGP_CBAJ_T0021576.1 MGP_CBAJ_G0016168.1 mouse_genomes_project 1 140945449 140976757 + MGP_CBAJ_P0021576 R3hdm1 protein_coding protein_coding MGP_CBAJ_T0021577.1 MGP_CBAJ_G0016168.1 mouse_genomes_project 1 140956537 140960246 + R3hdm1 protein_coding retained_intron MGP_CBAJ_T0021578.1 MGP_CBAJ_G0016168.1 mouse_genomes_project 1 140970677 141006943 + R3hdm1 protein_coding retained_intron MGP_CBAJ_T0021579.1 MGP_CBAJ_G0016168.1 mouse_genomes_project 1 141004586 141006944 + R3hdm1 protein_coding retained_intron MGP_CBAJ_T0020764.1 MGP_CBAJ_G0015990.1 mouse_genomes_project 1 93851446 93853170 + MGP_CBAJ_P0020764 1700019O17Rik protein_coding protein_coding MGP_CBAJ_T0012167.1 MGP_CBAJ_G0010279.1 mouse_genomes_project 1 177839820 177844127 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101446.1 MGP_CBAJ_G0039478.1 mouse_genomes_project 1 48366930 48372406 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0012133.1 MGP_CBAJ_G0010245.1 mouse_genomes_project 1 163949430 163949733 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021837.1 MGP_CBAJ_G0016230.1 mouse_genomes_project 1 147117079 147123234 - MGP_CBAJ_P0021837 Snrpe protein_coding nonsense_mediated_decay MGP_CBAJ_T0021838.1 MGP_CBAJ_G0016230.1 mouse_genomes_project 1 147117204 147123404 - MGP_CBAJ_P0021838 Snrpe protein_coding protein_coding MGP_CBAJ_T0021839.1 MGP_CBAJ_G0016230.1 mouse_genomes_project 1 147119273 147123436 - MGP_CBAJ_P0021839 Snrpe protein_coding protein_coding MGP_CBAJ_T0021840.1 MGP_CBAJ_G0016230.1 mouse_genomes_project 1 147119709 147123112 - MGP_CBAJ_P0021840 Snrpe protein_coding protein_coding MGP_CBAJ_T0021841.1 MGP_CBAJ_G0016230.1 mouse_genomes_project 1 147122049 147123402 - MGP_CBAJ_P0021841 Snrpe protein_coding protein_coding MGP_CBAJ_T0000597.1 MGP_CBAJ_G0000539.1 mouse_genomes_project 1 146333045 146334854 - TEC TEC MGP_CBAJ_T0000503.1 MGP_CBAJ_G0000445.1 mouse_genomes_project 1 89747135 89748181 - TEC TEC MGP_CBAJ_T0002854.1 MGP_CBAJ_G0002687.1 mouse_genomes_project 1 175166558 175235681 - Gm37679 antisense antisense MGP_CBAJ_T0002730.1 MGP_CBAJ_G0002594.1 mouse_genomes_project 1 45805647 45807582 - Gm29155 antisense antisense MGP_CBAJ_T0002731.1 MGP_CBAJ_G0002594.1 mouse_genomes_project 1 45807270 45807539 - Gm29155 antisense antisense MGP_CBAJ_T0011878.1 MGP_CBAJ_G0009990.1 mouse_genomes_project 1 50549023 50549850 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011793.1 MGP_CBAJ_G0009905.1 mouse_genomes_project 1 21196327 21196879 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012218.1 MGP_CBAJ_G0010330.1 mouse_genomes_project 1 207457959 207458557 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002923.1 MGP_CBAJ_G0002744.1 mouse_genomes_project 1 212916020 212934574 - 1700034H15Rik antisense antisense MGP_CBAJ_T0002924.1 MGP_CBAJ_G0002744.1 mouse_genomes_project 1 212920106 212932813 - 1700034H15Rik antisense antisense MGP_CBAJ_T0002925.1 MGP_CBAJ_G0002744.1 mouse_genomes_project 1 212920108 212932940 - 1700034H15Rik antisense antisense MGP_CBAJ_T0002926.1 MGP_CBAJ_G0002744.1 mouse_genomes_project 1 212920297 212935407 - 1700034H15Rik antisense antisense MGP_CBAJ_T0002927.1 MGP_CBAJ_G0002744.1 mouse_genomes_project 1 212923981 212944618 - 1700034H15Rik antisense antisense MGP_CBAJ_T0002928.1 MGP_CBAJ_G0002744.1 mouse_genomes_project 1 212933657 212944626 - 1700034H15Rik antisense antisense MGP_CBAJ_T0011753.1 MGP_CBAJ_G0009865.1 mouse_genomes_project 1 7147411 7148047 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0021551.1 MGP_CBAJ_G0016166.1 mouse_genomes_project 1 140610295 140680553 + MGP_CBAJ_P0021551 Rab3gap1 protein_coding unknown_likely_coding MGP_CBAJ_T0021552.1 MGP_CBAJ_G0016166.1 mouse_genomes_project 1 140610333 140680545 + MGP_CBAJ_P0021552 Rab3gap1 protein_coding protein_coding MGP_CBAJ_T0021553.1 MGP_CBAJ_G0016166.1 mouse_genomes_project 1 140610362 140638230 + Rab3gap1 protein_coding retained_intron MGP_CBAJ_T0021554.1 MGP_CBAJ_G0016166.1 mouse_genomes_project 1 140635116 140640135 + Rab3gap1 protein_coding retained_intron MGP_CBAJ_T0021555.1 MGP_CBAJ_G0016166.1 mouse_genomes_project 1 140659936 140663147 + Rab3gap1 protein_coding retained_intron MGP_CBAJ_T0021556.1 MGP_CBAJ_G0016166.1 mouse_genomes_project 1 140674896 140679590 + Rab3gap1 protein_coding processed_transcript MGP_CBAJ_T0098567.1 MGP_CBAJ_G0036822.1 mouse_genomes_project 1 147910300 147910407 - Gm24517 snRNA snRNA MGP_CBAJ_T0020303.1 MGP_CBAJ_G0015904.1 mouse_genomes_project 1 80869548 80883019 + MGP_CBAJ_P0020303 Wnt6 protein_coding protein_coding MGP_CBAJ_T0020304.1 MGP_CBAJ_G0015904.1 mouse_genomes_project 1 80880123 80882286 + Wnt6 protein_coding retained_intron MGP_CBAJ_T0021230.1 MGP_CBAJ_G0016094.1 mouse_genomes_project 1 104072078 104095010 + MGP_CBAJ_P0021230 Fam174a protein_coding protein_coding MGP_CBAJ_T0021231.1 MGP_CBAJ_G0016094.1 mouse_genomes_project 1 104072083 104086401 + MGP_CBAJ_P0021231 Fam174a protein_coding protein_coding MGP_CBAJ_T0011983.1 MGP_CBAJ_G0010095.1 mouse_genomes_project 1 88634162 88634868 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0020092.1 MGP_CBAJ_G0015864.1 mouse_genomes_project 1 75329851 75819744 + Spag16 protein_coding processed_transcript MGP_CBAJ_T0020093.1 MGP_CBAJ_G0015864.1 mouse_genomes_project 1 75329852 75819645 + Spag16 protein_coding processed_transcript MGP_CBAJ_T0020094.1 MGP_CBAJ_G0015864.1 mouse_genomes_project 1 75329869 76327005 + MGP_CBAJ_P0020094 Spag16 protein_coding protein_coding MGP_CBAJ_T0020095.1 MGP_CBAJ_G0015864.1 mouse_genomes_project 1 75329873 75451286 + MGP_CBAJ_P0020095 Spag16 protein_coding protein_coding MGP_CBAJ_T0020096.1 MGP_CBAJ_G0015864.1 mouse_genomes_project 1 75334618 75380009 + Spag16 protein_coding processed_transcript MGP_CBAJ_T0020097.1 MGP_CBAJ_G0015864.1 mouse_genomes_project 1 75478506 76327005 + Spag16 protein_coding processed_transcript MGP_CBAJ_T0020098.1 MGP_CBAJ_G0015864.1 mouse_genomes_project 1 75478533 75834477 + Spag16 protein_coding processed_transcript MGP_CBAJ_T0012057.1 MGP_CBAJ_G0010169.1 mouse_genomes_project 1 123004972 123005637 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0022380.1 MGP_CBAJ_G0016340.1 mouse_genomes_project 1 169730635 169786834 + MGP_CBAJ_P0022380 Rgs8 protein_coding protein_coding MGP_CBAJ_T0022381.1 MGP_CBAJ_G0016340.1 mouse_genomes_project 1 169738740 169777545 + MGP_CBAJ_P0022381 Rgs8 protein_coding protein_coding MGP_CBAJ_T0022382.1 MGP_CBAJ_G0016340.1 mouse_genomes_project 1 169742155 169779496 + MGP_CBAJ_P0022382 Rgs8 protein_coding protein_coding MGP_CBAJ_T0022383.1 MGP_CBAJ_G0016340.1 mouse_genomes_project 1 169742813 169779288 + MGP_CBAJ_P0022383 Rgs8 protein_coding protein_coding MGP_CBAJ_T0022384.1 MGP_CBAJ_G0016340.1 mouse_genomes_project 1 169742851 169782089 + MGP_CBAJ_P0022384 Rgs8 protein_coding protein_coding MGP_CBAJ_T0022385.1 MGP_CBAJ_G0016340.1 mouse_genomes_project 1 169743132 169777595 + MGP_CBAJ_P0022385 Rgs8 protein_coding protein_coding MGP_CBAJ_T0022386.1 MGP_CBAJ_G0016340.1 mouse_genomes_project 1 169743196 169777600 + MGP_CBAJ_P0022386 Rgs8 protein_coding protein_coding MGP_CBAJ_T0022387.1 MGP_CBAJ_G0016340.1 mouse_genomes_project 1 169743212 169779457 + MGP_CBAJ_P0022387 Rgs8 protein_coding protein_coding MGP_CBAJ_T0022388.1 MGP_CBAJ_G0016340.1 mouse_genomes_project 1 169743248 169784178 + MGP_CBAJ_P0022388 Rgs8 protein_coding protein_coding MGP_CBAJ_T0022389.1 MGP_CBAJ_G0016340.1 mouse_genomes_project 1 169745028 169751123 + Rgs8 protein_coding processed_transcript MGP_CBAJ_T0022438.1 MGP_CBAJ_G0016353.1 mouse_genomes_project 1 171480072 171481583 - BC034090 protein_coding retained_intron MGP_CBAJ_T0022439.1 MGP_CBAJ_G0016353.1 mouse_genomes_project 1 171480074 171513685 - MGP_CBAJ_P0022439 BC034090 protein_coding protein_coding MGP_CBAJ_T0022440.1 MGP_CBAJ_G0016353.1 mouse_genomes_project 1 171485122 171492873 - BC034090 protein_coding processed_transcript MGP_CBAJ_T0022441.1 MGP_CBAJ_G0016353.1 mouse_genomes_project 1 171485872 171492622 - BC034090 protein_coding processed_transcript MGP_CBAJ_T0022442.1 MGP_CBAJ_G0016353.1 mouse_genomes_project 1 171493137 171497342 - BC034090 protein_coding processed_transcript MGP_CBAJ_T0022443.1 MGP_CBAJ_G0016353.1 mouse_genomes_project 1 171493487 171500359 - MGP_CBAJ_P0022443 BC034090 protein_coding protein_coding MGP_CBAJ_T0022444.1 MGP_CBAJ_G0016353.1 mouse_genomes_project 1 171493571 171510362 - BC034090 protein_coding retained_intron MGP_CBAJ_T0022445.1 MGP_CBAJ_G0016353.1 mouse_genomes_project 1 171496561 171499352 - BC034090 protein_coding retained_intron MGP_CBAJ_T0018690.1 MGP_CBAJ_G0015592.1 mouse_genomes_project 1 13160407 13212229 - MGP_CBAJ_P0018690 Trpa1 protein_coding protein_coding MGP_CBAJ_T0020903.1 MGP_CBAJ_G0016016.1 mouse_genomes_project 1 95782858 95995691 + MGP_CBAJ_P0020903 Ugt1a9 protein_coding protein_coding MGP_CBAJ_T0020310.1 MGP_CBAJ_G0015908.1 mouse_genomes_project 1 81004162 81007393 - MGP_CBAJ_P0020310 Cryba2 protein_coding protein_coding MGP_CBAJ_T0020311.1 MGP_CBAJ_G0015908.1 mouse_genomes_project 1 81004759 81007142 - MGP_CBAJ_P0020311 Cryba2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0011872.1 MGP_CBAJ_G0009984.1 mouse_genomes_project 1 48197945 48199121 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000727.1 MGP_CBAJ_G0000666.1 mouse_genomes_project 1 199604871 199607400 + TEC TEC MGP_CBAJ_T0002915.1 MGP_CBAJ_G0002737.1 mouse_genomes_project 1 210614252 210617711 - Gm26574 antisense antisense MGP_CBAJ_T0099818.1 MGP_CBAJ_G0038073.1 mouse_genomes_project 1 178017753 178017829 + Gm25789 snoRNA snoRNA MGP_CBAJ_T0022289.1 MGP_CBAJ_G0016322.1 mouse_genomes_project 1 167244978 167260345 + Trmt1l protein_coding retained_intron MGP_CBAJ_T0022290.1 MGP_CBAJ_G0016322.1 mouse_genomes_project 1 167244978 167278044 + MGP_CBAJ_P0022290 Trmt1l protein_coding protein_coding MGP_CBAJ_T0022291.1 MGP_CBAJ_G0016322.1 mouse_genomes_project 1 167245073 167253262 + Trmt1l protein_coding retained_intron MGP_CBAJ_T0022292.1 MGP_CBAJ_G0016322.1 mouse_genomes_project 1 167245078 167269939 + Trmt1l protein_coding retained_intron MGP_CBAJ_T0022293.1 MGP_CBAJ_G0016322.1 mouse_genomes_project 1 167245084 167247072 + Trmt1l protein_coding retained_intron MGP_CBAJ_T0022294.1 MGP_CBAJ_G0016322.1 mouse_genomes_project 1 167245103 167253262 + Trmt1l protein_coding retained_intron MGP_CBAJ_T0022295.1 MGP_CBAJ_G0016322.1 mouse_genomes_project 1 167245142 167278044 + MGP_CBAJ_P0022295 Trmt1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0002773.1 MGP_CBAJ_G0002623.1 mouse_genomes_project 1 81480362 81484594 - Gm15178 antisense antisense MGP_CBAJ_T0019003.1 MGP_CBAJ_G0015662.1 mouse_genomes_project 1 37301822 37310659 - MGP_CBAJ_P0019003 Neurl3 protein_coding protein_coding MGP_CBAJ_T0019004.1 MGP_CBAJ_G0015662.1 mouse_genomes_project 1 37306085 37313342 - MGP_CBAJ_P0019004 Neurl3 protein_coding protein_coding MGP_CBAJ_T0019627.1 MGP_CBAJ_G0015782.1 mouse_genomes_project 1 61277903 61298318 - MGP_CBAJ_P0019627 Tyw5 protein_coding protein_coding MGP_CBAJ_T0019628.1 MGP_CBAJ_G0015782.1 mouse_genomes_project 1 61277906 61297688 - Tyw5 protein_coding retained_intron MGP_CBAJ_T0019629.1 MGP_CBAJ_G0015782.1 mouse_genomes_project 1 61277906 61297891 - MGP_CBAJ_P0019629 Tyw5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019630.1 MGP_CBAJ_G0015782.1 mouse_genomes_project 1 61278071 61280438 - Tyw5 protein_coding processed_transcript MGP_CBAJ_T0019631.1 MGP_CBAJ_G0015782.1 mouse_genomes_project 1 61278082 61283365 - Tyw5 protein_coding retained_intron MGP_CBAJ_T0019632.1 MGP_CBAJ_G0015782.1 mouse_genomes_project 1 61278332 61297660 - MGP_CBAJ_P0019632 Tyw5 protein_coding protein_coding MGP_CBAJ_T0019633.1 MGP_CBAJ_G0015782.1 mouse_genomes_project 1 61278352 61281407 - Tyw5 protein_coding retained_intron MGP_CBAJ_T0019634.1 MGP_CBAJ_G0015782.1 mouse_genomes_project 1 61280378 61291189 - Tyw5 protein_coding processed_transcript MGP_CBAJ_T0019635.1 MGP_CBAJ_G0015782.1 mouse_genomes_project 1 61281095 61297688 - MGP_CBAJ_P0019635 Tyw5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019636.1 MGP_CBAJ_G0015782.1 mouse_genomes_project 1 61282851 61297754 - Tyw5 protein_coding retained_intron MGP_CBAJ_T0020501.1 MGP_CBAJ_G0015935.1 mouse_genomes_project 1 81639043 81654642 + MGP_CBAJ_P0020501 Stk11ip protein_coding unknown_likely_coding MGP_CBAJ_T0020502.1 MGP_CBAJ_G0015935.1 mouse_genomes_project 1 81639334 81654636 + Stk11ip protein_coding retained_intron MGP_CBAJ_T0020503.1 MGP_CBAJ_G0015935.1 mouse_genomes_project 1 81639354 81644653 + Stk11ip protein_coding retained_intron MGP_CBAJ_T0020504.1 MGP_CBAJ_G0015935.1 mouse_genomes_project 1 81645845 81647030 + Stk11ip protein_coding retained_intron MGP_CBAJ_T0020505.1 MGP_CBAJ_G0015935.1 mouse_genomes_project 1 81646180 81654636 + Stk11ip protein_coding retained_intron MGP_CBAJ_T0020506.1 MGP_CBAJ_G0015935.1 mouse_genomes_project 1 81647220 81649891 + Stk11ip protein_coding retained_intron MGP_CBAJ_T0020507.1 MGP_CBAJ_G0015935.1 mouse_genomes_project 1 81650084 81651811 + Stk11ip protein_coding retained_intron MGP_CBAJ_T0020508.1 MGP_CBAJ_G0015935.1 mouse_genomes_project 1 81650591 81651338 + Stk11ip protein_coding processed_transcript MGP_CBAJ_T0002728.1 MGP_CBAJ_G0002592.1 mouse_genomes_project 1 45032364 45033232 + Gm28782 antisense antisense MGP_CBAJ_T0000714.1 MGP_CBAJ_G0000654.1 mouse_genomes_project 1 195806309 195807728 - TEC TEC MGP_CBAJ_T0022525.1 MGP_CBAJ_G0016367.1 mouse_genomes_project 1 173062610 173092460 - MGP_CBAJ_P0022525 Tor3a protein_coding protein_coding MGP_CBAJ_T0022526.1 MGP_CBAJ_G0016367.1 mouse_genomes_project 1 173062610 173092460 - MGP_CBAJ_P0022526 Tor3a protein_coding nonsense_mediated_decay MGP_CBAJ_T0022527.1 MGP_CBAJ_G0016367.1 mouse_genomes_project 1 173062610 173092429 - MGP_CBAJ_P0022527 Tor3a protein_coding nonsense_mediated_decay MGP_CBAJ_T0022528.1 MGP_CBAJ_G0016367.1 mouse_genomes_project 1 173064034 173092418 - MGP_CBAJ_P0022528 Tor3a protein_coding protein_coding MGP_CBAJ_T0022529.1 MGP_CBAJ_G0016367.1 mouse_genomes_project 1 173064663 173067404 - Tor3a protein_coding processed_transcript MGP_CBAJ_T0022530.1 MGP_CBAJ_G0016367.1 mouse_genomes_project 1 173069512 173077817 - Tor3a protein_coding processed_transcript MGP_CBAJ_T0022531.1 MGP_CBAJ_G0016367.1 mouse_genomes_project 1 173077778 173092439 - MGP_CBAJ_P0022531 Tor3a protein_coding protein_coding MGP_CBAJ_T0002810.1 MGP_CBAJ_G0002653.1 mouse_genomes_project 1 143585422 143713310 + antisense antisense MGP_CBAJ_T0000502.1 MGP_CBAJ_G0000444.1 mouse_genomes_project 1 89245041 89247876 + TEC TEC MGP_CBAJ_T0012181.1 MGP_CBAJ_G0010293.1 mouse_genomes_project 1 183512303 183514212 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011725.1 MGP_CBAJ_G0009837.1 mouse_genomes_project 1 2025660 2026580 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009360.1 MGP_CBAJ_G0007498.1 mouse_genomes_project 1 35265672 35265751 - Mir5103 miRNA miRNA MGP_CBAJ_T0020929.1 MGP_CBAJ_G0016030.1 mouse_genomes_project 1 96572595 96610673 - MGP_CBAJ_P0020929 Arl4c protein_coding nonsense_mediated_decay MGP_CBAJ_T0020930.1 MGP_CBAJ_G0016030.1 mouse_genomes_project 1 96572597 96610673 - MGP_CBAJ_P0020930 Arl4c protein_coding protein_coding MGP_CBAJ_T0020931.1 MGP_CBAJ_G0016030.1 mouse_genomes_project 1 96607021 96611018 - MGP_CBAJ_P0020931 Arl4c protein_coding protein_coding MGP_CBAJ_T0005862.1 MGP_CBAJ_G0004908.1 mouse_genomes_project 1 171259722 171309284 - Gm29282 lincRNA lincRNA MGP_CBAJ_T0023028.1 MGP_CBAJ_G0016468.1 mouse_genomes_project 1 188302371 188310563 - MGP_CBAJ_P0023028 Gm7694 protein_coding protein_coding MGP_CBAJ_T0000634.1 MGP_CBAJ_G0000574.1 mouse_genomes_project 1 157443093 157443227 + TEC TEC MGP_CBAJ_T0098566.1 MGP_CBAJ_G0036821.1 mouse_genomes_project 1 145387485 145387601 + Gm26034 snRNA snRNA MGP_CBAJ_T0023372.1 MGP_CBAJ_G0016561.1 mouse_genomes_project 1 192934729 192935676 + MGP_CBAJ_P0023372 Olfr424 protein_coding protein_coding MGP_CBAJ_T0016749.1 MGP_CBAJ_G0014841.1 mouse_genomes_project 1 81242693 81256103 - Gm29253 processed_transcript processed_transcript MGP_CBAJ_T0011972.1 MGP_CBAJ_G0010084.1 mouse_genomes_project 1 81769825 81774542 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000387.1 MGP_CBAJ_G0000330.1 mouse_genomes_project 1 25391212 25395095 - TEC TEC MGP_CBAJ_T0012200.1 MGP_CBAJ_G0010312.1 mouse_genomes_project 1 196365132 196365449 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000348.1 MGP_CBAJ_G0000293.1 mouse_genomes_project 1 11358893 11360509 - TEC TEC MGP_CBAJ_T0012150.1 MGP_CBAJ_G0010262.1 mouse_genomes_project 1 169338068 169339115 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011729.1 MGP_CBAJ_G0009841.1 mouse_genomes_project 1 2964787 2965181 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101475.1 MGP_CBAJ_G0039507.1 mouse_genomes_project 1 112910805 113026368 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099736.1 MGP_CBAJ_G0037991.1 mouse_genomes_project 1 14034620 14034732 - Gm25227 snoRNA snoRNA MGP_CBAJ_T0000676.1 MGP_CBAJ_G0000616.1 mouse_genomes_project 1 177475962 177479600 - TEC TEC MGP_CBAJ_T0005778.1 MGP_CBAJ_G0004841.1 mouse_genomes_project 1 118020777 118030635 + Gm15389 lincRNA lincRNA MGP_CBAJ_T0005881.1 MGP_CBAJ_G0004922.1 mouse_genomes_project 1 181854556 181856104 + Gm32391 lincRNA lincRNA MGP_CBAJ_T0021958.1 MGP_CBAJ_G0016258.1 mouse_genomes_project 1 148852483 148869881 + MGP_CBAJ_P0021958 Ptpn7 protein_coding protein_coding MGP_CBAJ_T0021959.1 MGP_CBAJ_G0016258.1 mouse_genomes_project 1 148852508 148871103 + MGP_CBAJ_P0021959 Ptpn7 protein_coding protein_coding MGP_CBAJ_T0021960.1 MGP_CBAJ_G0016258.1 mouse_genomes_project 1 148853091 148859736 + Ptpn7 protein_coding retained_intron MGP_CBAJ_T0021961.1 MGP_CBAJ_G0016258.1 mouse_genomes_project 1 148853092 148870734 + MGP_CBAJ_P0021961 Ptpn7 protein_coding protein_coding MGP_CBAJ_T0005640.1 MGP_CBAJ_G0004733.1 mouse_genomes_project 1 54580131 54585368 - Gm17767 lincRNA lincRNA MGP_CBAJ_T0005641.1 MGP_CBAJ_G0004733.1 mouse_genomes_project 1 54582543 54681016 - Gm17767 lincRNA lincRNA MGP_CBAJ_T0012020.1 MGP_CBAJ_G0010132.1 mouse_genomes_project 1 108971238 108973084 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0021076.1 MGP_CBAJ_G0016060.1 mouse_genomes_project 1 100925075 100926166 + MGP_CBAJ_P0021076 Olfr1412 protein_coding protein_coding MGP_CBAJ_T0021984.1 MGP_CBAJ_G0016265.1 mouse_genomes_project 1 149145368 149152973 - MGP_CBAJ_P0021984 Shisa4 protein_coding protein_coding MGP_CBAJ_T0021985.1 MGP_CBAJ_G0016265.1 mouse_genomes_project 1 149145371 149147756 - Shisa4 protein_coding retained_intron MGP_CBAJ_T0021986.1 MGP_CBAJ_G0016265.1 mouse_genomes_project 1 149151623 149152813 - Shisa4 protein_coding retained_intron MGP_CBAJ_T0023815.1 MGP_CBAJ_G0016660.1 mouse_genomes_project 1 208853233 208962531 + Ush2a protein_coding retained_intron MGP_CBAJ_T0023816.1 MGP_CBAJ_G0016660.1 mouse_genomes_project 1 208853245 209074375 + Ush2a protein_coding retained_intron MGP_CBAJ_T0023817.1 MGP_CBAJ_G0016660.1 mouse_genomes_project 1 208854244 209632914 + MGP_CBAJ_P0023817 Ush2a protein_coding protein_coding MGP_CBAJ_T0023818.1 MGP_CBAJ_G0016660.1 mouse_genomes_project 1 209169023 209323411 + Ush2a protein_coding retained_intron MGP_CBAJ_T0023819.1 MGP_CBAJ_G0016660.1 mouse_genomes_project 1 209618674 209632838 + MGP_CBAJ_P0023819 Ush2a protein_coding protein_coding MGP_CBAJ_T0018792.1 MGP_CBAJ_G0015618.1 mouse_genomes_project 1 19893439 19897346 + Efhc1 protein_coding processed_transcript MGP_CBAJ_T0018793.1 MGP_CBAJ_G0015618.1 mouse_genomes_project 1 19893501 19935828 + MGP_CBAJ_P0018793 Efhc1 protein_coding protein_coding MGP_CBAJ_T0002846.1 MGP_CBAJ_G0002679.1 mouse_genomes_project 1 167743178 167755477 + Gm28610 antisense antisense MGP_CBAJ_T0000459.1 MGP_CBAJ_G0000401.1 mouse_genomes_project 1 66225870 66227235 + TEC TEC MGP_CBAJ_T0012208.1 MGP_CBAJ_G0010320.1 mouse_genomes_project 1 201051606 201053453 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0020813.1 MGP_CBAJ_G0016004.1 mouse_genomes_project 1 94825812 94880217 + MGP_CBAJ_P0020813 Efhd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020814.1 MGP_CBAJ_G0016004.1 mouse_genomes_project 1 94825812 94880220 + MGP_CBAJ_P0020814 Efhd1 protein_coding protein_coding MGP_CBAJ_T0020815.1 MGP_CBAJ_G0016004.1 mouse_genomes_project 1 94878606 94879123 + Efhd1 protein_coding processed_transcript MGP_CBAJ_T0005608.1 MGP_CBAJ_G0004715.1 mouse_genomes_project 1 43608698 43788769 + Gm29260 lincRNA lincRNA MGP_CBAJ_T0005609.1 MGP_CBAJ_G0004715.1 mouse_genomes_project 1 43765742 43767472 + Gm29260 lincRNA lincRNA MGP_CBAJ_T0099800.1 MGP_CBAJ_G0038055.1 mouse_genomes_project 1 154268690 154268832 + Gm26048 snoRNA snoRNA MGP_CBAJ_T0000698.1 MGP_CBAJ_G0000638.1 mouse_genomes_project 1 183409404 183409966 - TEC TEC MGP_CBAJ_T0021709.1 MGP_CBAJ_G0016204.1 mouse_genomes_project 1 145237458 145257482 + MGP_CBAJ_P0021709 Slc45a3 protein_coding protein_coding MGP_CBAJ_T0021710.1 MGP_CBAJ_G0016204.1 mouse_genomes_project 1 145245119 145257477 + MGP_CBAJ_P0021710 Slc45a3 protein_coding protein_coding MGP_CBAJ_T0021711.1 MGP_CBAJ_G0016204.1 mouse_genomes_project 1 145251231 145252458 + MGP_CBAJ_P0021711 Slc45a3 protein_coding protein_coding MGP_CBAJ_T0021712.1 MGP_CBAJ_G0016204.1 mouse_genomes_project 1 145253476 145256419 + Slc45a3 protein_coding processed_transcript MGP_CBAJ_T0018898.1 MGP_CBAJ_G0015644.1 mouse_genomes_project 1 34173807 34413707 - MGP_CBAJ_P0018898 Prim2 protein_coding protein_coding MGP_CBAJ_T0018899.1 MGP_CBAJ_G0015644.1 mouse_genomes_project 1 34202575 34361438 - Prim2 protein_coding retained_intron MGP_CBAJ_T0018900.1 MGP_CBAJ_G0015644.1 mouse_genomes_project 1 34360179 34362620 - Prim2 protein_coding retained_intron MGP_CBAJ_T0023083.1 MGP_CBAJ_G0016483.1 mouse_genomes_project 1 189344649 189369797 - MGP_CBAJ_P0023083 Pcp4l1 protein_coding protein_coding MGP_CBAJ_T0023404.1 MGP_CBAJ_G0016573.1 mouse_genomes_project 1 194576518 194615636 + MGP_CBAJ_P0023404 Kmo protein_coding nonsense_mediated_decay MGP_CBAJ_T0023405.1 MGP_CBAJ_G0016573.1 mouse_genomes_project 1 194588145 194616527 + MGP_CBAJ_P0023405 Kmo protein_coding protein_coding MGP_CBAJ_T0023406.1 MGP_CBAJ_G0016573.1 mouse_genomes_project 1 194588150 194609772 + Kmo protein_coding retained_intron MGP_CBAJ_T0023407.1 MGP_CBAJ_G0016573.1 mouse_genomes_project 1 194588175 194593572 + Kmo protein_coding processed_transcript MGP_CBAJ_T0023408.1 MGP_CBAJ_G0016573.1 mouse_genomes_project 1 194588329 194617816 + MGP_CBAJ_P0023408 Kmo protein_coding protein_coding MGP_CBAJ_T0023409.1 MGP_CBAJ_G0016573.1 mouse_genomes_project 1 194588388 194605214 + Kmo protein_coding processed_transcript MGP_CBAJ_T0097875.1 MGP_CBAJ_G0036148.1 mouse_genomes_project 1 114846931 114847043 - n-R5s216 rRNA rRNA MGP_CBAJ_T0005825.1 MGP_CBAJ_G0004880.1 mouse_genomes_project 1 150428964 150442975 + Gm37799 lincRNA lincRNA MGP_CBAJ_T0018674.1 MGP_CBAJ_G0015588.1 mouse_genomes_project 1 11764559 11809111 - MGP_CBAJ_P0018674 Lactb2 protein_coding protein_coding MGP_CBAJ_T0018675.1 MGP_CBAJ_G0015588.1 mouse_genomes_project 1 11773595 11782013 - Lactb2 protein_coding retained_intron MGP_CBAJ_T0021097.1 MGP_CBAJ_G0016069.1 mouse_genomes_project 1 101283377 101293426 + MGP_CBAJ_P0021097 Rnpepl1 protein_coding protein_coding MGP_CBAJ_T0021098.1 MGP_CBAJ_G0016069.1 mouse_genomes_project 1 101283419 101293157 + Rnpepl1 protein_coding retained_intron MGP_CBAJ_T0021099.1 MGP_CBAJ_G0016069.1 mouse_genomes_project 1 101283447 101286003 + Rnpepl1 protein_coding retained_intron MGP_CBAJ_T0021100.1 MGP_CBAJ_G0016069.1 mouse_genomes_project 1 101283715 101289322 + MGP_CBAJ_P0021100 Rnpepl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021101.1 MGP_CBAJ_G0016069.1 mouse_genomes_project 1 101283803 101288518 + MGP_CBAJ_P0021101 Rnpepl1 protein_coding protein_coding MGP_CBAJ_T0021102.1 MGP_CBAJ_G0016069.1 mouse_genomes_project 1 101288428 101293157 + Rnpepl1 protein_coding retained_intron MGP_CBAJ_T0021103.1 MGP_CBAJ_G0016069.1 mouse_genomes_project 1 101289375 101293157 + MGP_CBAJ_P0021103 Rnpepl1 protein_coding protein_coding MGP_CBAJ_T0021104.1 MGP_CBAJ_G0016069.1 mouse_genomes_project 1 101289389 101291801 + Rnpepl1 protein_coding retained_intron MGP_CBAJ_T0021105.1 MGP_CBAJ_G0016069.1 mouse_genomes_project 1 101289596 101290658 + Rnpepl1 protein_coding retained_intron MGP_CBAJ_T0021106.1 MGP_CBAJ_G0016069.1 mouse_genomes_project 1 101289731 101291650 + MGP_CBAJ_P0021106 Rnpepl1 protein_coding protein_coding MGP_CBAJ_T0021107.1 MGP_CBAJ_G0016069.1 mouse_genomes_project 1 101290000 101291802 + Rnpepl1 protein_coding retained_intron MGP_CBAJ_T0021108.1 MGP_CBAJ_G0016069.1 mouse_genomes_project 1 101292198 101296968 + MGP_CBAJ_P0021108 Rnpepl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023378.1 MGP_CBAJ_G0016566.1 mouse_genomes_project 1 193277612 193278621 + MGP_CBAJ_P0023378 Olfr248 protein_coding protein_coding MGP_CBAJ_T0022816.1 MGP_CBAJ_G0016419.1 mouse_genomes_project 1 181406768 181428958 + MGP_CBAJ_P0022816 Sell protein_coding protein_coding MGP_CBAJ_T0022817.1 MGP_CBAJ_G0016419.1 mouse_genomes_project 1 181406871 181425449 + MGP_CBAJ_P0022817 Sell protein_coding protein_coding MGP_CBAJ_T0022818.1 MGP_CBAJ_G0016419.1 mouse_genomes_project 1 181406975 181424469 + MGP_CBAJ_P0022818 Sell protein_coding protein_coding MGP_CBAJ_T0022819.1 MGP_CBAJ_G0016419.1 mouse_genomes_project 1 181413748 181424773 + MGP_CBAJ_P0022819 Sell protein_coding protein_coding MGP_CBAJ_T0022705.1 MGP_CBAJ_G0016396.1 mouse_genomes_project 1 178912664 178982537 - MGP_CBAJ_P0022705 Suco protein_coding protein_coding MGP_CBAJ_T0022706.1 MGP_CBAJ_G0016396.1 mouse_genomes_project 1 178916934 178919257 - Suco protein_coding retained_intron MGP_CBAJ_T0022707.1 MGP_CBAJ_G0016396.1 mouse_genomes_project 1 178924681 178925836 - Suco protein_coding retained_intron MGP_CBAJ_T0022708.1 MGP_CBAJ_G0016396.1 mouse_genomes_project 1 178931678 178945061 - Suco protein_coding processed_transcript MGP_CBAJ_T0022709.1 MGP_CBAJ_G0016396.1 mouse_genomes_project 1 178935302 178944622 - Suco protein_coding retained_intron MGP_CBAJ_T0022710.1 MGP_CBAJ_G0016396.1 mouse_genomes_project 1 178945115 178955492 - MGP_CBAJ_P0022710 Suco protein_coding protein_coding MGP_CBAJ_T0022711.1 MGP_CBAJ_G0016396.1 mouse_genomes_project 1 178954577 178961953 - MGP_CBAJ_P0022711 Suco protein_coding protein_coding MGP_CBAJ_T0002903.1 MGP_CBAJ_G0002726.1 mouse_genomes_project 1 205118697 205141923 + Gm38251 antisense antisense MGP_CBAJ_T0023210.1 MGP_CBAJ_G0016508.1 mouse_genomes_project 1 190046927 190083186 + MGP_CBAJ_P0023210 Slamf1 protein_coding protein_coding MGP_CBAJ_T0023211.1 MGP_CBAJ_G0016508.1 mouse_genomes_project 1 190046955 190077809 + Slamf1 protein_coding retained_intron MGP_CBAJ_T0000388.1 MGP_CBAJ_G0000331.1 mouse_genomes_project 1 25396623 25397639 - TEC TEC MGP_CBAJ_T0020559.1 MGP_CBAJ_G0015947.1 mouse_genomes_project 1 86204167 86275040 - MGP_CBAJ_P0020559 Ap1s3 protein_coding protein_coding MGP_CBAJ_T0020560.1 MGP_CBAJ_G0015947.1 mouse_genomes_project 1 86204874 86275033 - MGP_CBAJ_P0020560 Ap1s3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020561.1 MGP_CBAJ_G0015947.1 mouse_genomes_project 1 86205215 86275036 - MGP_CBAJ_P0020561 Ap1s3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0009407.1 MGP_CBAJ_G0007545.1 mouse_genomes_project 1 110361327 110361436 + Gm25537 miRNA miRNA MGP_CBAJ_T0011863.1 MGP_CBAJ_G0009975.1 mouse_genomes_project 1 46742595 46743015 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000575.1 MGP_CBAJ_G0000517.1 mouse_genomes_project 1 139892813 139894207 + TEC TEC MGP_CBAJ_T0000695.1 MGP_CBAJ_G0000635.1 mouse_genomes_project 1 182889821 182891156 + TEC TEC MGP_CBAJ_T0022409.1 MGP_CBAJ_G0016347.1 mouse_genomes_project 1 170034543 170042093 + MGP_CBAJ_P0022409 protein_coding unknown_likely_coding MGP_CBAJ_T0022410.1 MGP_CBAJ_G0016347.1 mouse_genomes_project 1 170035215 170044545 + MGP_CBAJ_P0022410 protein_coding protein_coding MGP_CBAJ_T0022411.1 MGP_CBAJ_G0016347.1 mouse_genomes_project 1 170035725 170040960 + MGP_CBAJ_P0022411 protein_coding protein_coding MGP_CBAJ_T0022412.1 MGP_CBAJ_G0016347.1 mouse_genomes_project 1 170038401 170044434 + protein_coding processed_transcript MGP_CBAJ_T0022413.1 MGP_CBAJ_G0016347.1 mouse_genomes_project 1 170040646 170044521 + protein_coding retained_intron MGP_CBAJ_T0022732.1 MGP_CBAJ_G0016400.1 mouse_genomes_project 1 179703553 179719979 - MGP_CBAJ_P0022732 Mettl13 protein_coding protein_coding MGP_CBAJ_T0022733.1 MGP_CBAJ_G0016400.1 mouse_genomes_project 1 179705105 179719950 - MGP_CBAJ_P0022733 Mettl13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022734.1 MGP_CBAJ_G0016400.1 mouse_genomes_project 1 179707268 179715790 - MGP_CBAJ_P0022734 Mettl13 protein_coding protein_coding MGP_CBAJ_T0022735.1 MGP_CBAJ_G0016400.1 mouse_genomes_project 1 179708569 179719684 - Mettl13 protein_coding processed_transcript MGP_CBAJ_T0022736.1 MGP_CBAJ_G0016400.1 mouse_genomes_project 1 179710346 179717955 - MGP_CBAJ_P0022736 Mettl13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022737.1 MGP_CBAJ_G0016400.1 mouse_genomes_project 1 179712876 179719966 - Mettl13 protein_coding retained_intron MGP_CBAJ_T0022738.1 MGP_CBAJ_G0016400.1 mouse_genomes_project 1 179715063 179719956 - Mettl13 protein_coding retained_intron MGP_CBAJ_T0022739.1 MGP_CBAJ_G0016400.1 mouse_genomes_project 1 179718255 179719957 - Mettl13 protein_coding retained_intron MGP_CBAJ_T0019516.1 MGP_CBAJ_G0015757.1 mouse_genomes_project 1 56356061 56394165 - MGP_CBAJ_P0019516 1700019A02Rik protein_coding protein_coding MGP_CBAJ_T0019517.1 MGP_CBAJ_G0015757.1 mouse_genomes_project 1 56356084 56394137 - MGP_CBAJ_P0019517 1700019A02Rik protein_coding protein_coding MGP_CBAJ_T0022825.1 MGP_CBAJ_G0016421.1 mouse_genomes_project 1 181514022 181593560 + MGP_CBAJ_P0022825 F5 protein_coding protein_coding MGP_CBAJ_T0005603.1 MGP_CBAJ_G0004712.1 mouse_genomes_project 1 41373894 41382450 - 1700066B17Rik lincRNA lincRNA MGP_CBAJ_T0005604.1 MGP_CBAJ_G0004712.1 mouse_genomes_project 1 41377156 41384081 - 1700066B17Rik lincRNA lincRNA MGP_CBAJ_T0005605.1 MGP_CBAJ_G0004712.1 mouse_genomes_project 1 41377161 41384085 - 1700066B17Rik lincRNA lincRNA MGP_CBAJ_T0000326.1 MGP_CBAJ_G0000271.1 mouse_genomes_project 1 873334 875685 + TEC TEC MGP_CBAJ_T0020063.1 MGP_CBAJ_G0015859.1 mouse_genomes_project 1 72055443 72081489 - MGP_CBAJ_P0020063 Myl1 protein_coding protein_coding MGP_CBAJ_T0020064.1 MGP_CBAJ_G0015859.1 mouse_genomes_project 1 72055443 72067070 - MGP_CBAJ_P0020064 Myl1 protein_coding protein_coding MGP_CBAJ_T0020065.1 MGP_CBAJ_G0015859.1 mouse_genomes_project 1 72055445 72066787 - MGP_CBAJ_P0020065 Myl1 protein_coding protein_coding MGP_CBAJ_T0020066.1 MGP_CBAJ_G0015859.1 mouse_genomes_project 1 72056156 72066783 - Myl1 protein_coding processed_transcript MGP_CBAJ_T0020067.1 MGP_CBAJ_G0015859.1 mouse_genomes_project 1 72057201 72066766 - MGP_CBAJ_P0020067 Myl1 protein_coding protein_coding MGP_CBAJ_T0020068.1 MGP_CBAJ_G0015859.1 mouse_genomes_project 1 72057795 72081729 - MGP_CBAJ_P0020068 Myl1 protein_coding protein_coding MGP_CBAJ_T0020069.1 MGP_CBAJ_G0015859.1 mouse_genomes_project 1 72061590 72066123 - Myl1 protein_coding retained_intron MGP_CBAJ_T0020070.1 MGP_CBAJ_G0015859.1 mouse_genomes_project 1 72080808 72081749 - Myl1 protein_coding retained_intron MGP_CBAJ_T0019550.1 MGP_CBAJ_G0015766.1 mouse_genomes_project 1 57735626 57757252 + Ccdc150 protein_coding retained_intron MGP_CBAJ_T0019551.1 MGP_CBAJ_G0015766.1 mouse_genomes_project 1 57735626 57859268 + MGP_CBAJ_P0019551 Ccdc150 protein_coding protein_coding MGP_CBAJ_T0019552.1 MGP_CBAJ_G0015766.1 mouse_genomes_project 1 57735665 57859011 + MGP_CBAJ_P0019552 Ccdc150 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019553.1 MGP_CBAJ_G0015766.1 mouse_genomes_project 1 57821363 57859149 + Ccdc150 protein_coding processed_transcript MGP_CBAJ_T0019554.1 MGP_CBAJ_G0015766.1 mouse_genomes_project 1 57845174 57859144 + Ccdc150 protein_coding retained_intron MGP_CBAJ_T0098537.1 MGP_CBAJ_G0036792.1 mouse_genomes_project 1 71964052 71964112 + Gm27934 snRNA snRNA MGP_CBAJ_T0005713.1 MGP_CBAJ_G0004785.1 mouse_genomes_project 1 83854524 83856374 + Gm28386 lincRNA lincRNA MGP_CBAJ_T0021053.1 MGP_CBAJ_G0016055.1 mouse_genomes_project 1 100033319 100087315 + MGP_CBAJ_P0021053 Twist2 protein_coding protein_coding MGP_CBAJ_T0021054.1 MGP_CBAJ_G0016055.1 mouse_genomes_project 1 100033328 100035849 + MGP_CBAJ_P0021054 Twist2 protein_coding protein_coding MGP_CBAJ_T0023669.1 MGP_CBAJ_G0016626.1 mouse_genomes_project 1 202067259 202074939 + MGP_CBAJ_P0023669 Srp9 protein_coding protein_coding MGP_CBAJ_T0023670.1 MGP_CBAJ_G0016626.1 mouse_genomes_project 1 202067272 202075427 + MGP_CBAJ_P0023670 Srp9 protein_coding protein_coding MGP_CBAJ_T0023671.1 MGP_CBAJ_G0016626.1 mouse_genomes_project 1 202067303 202071591 + Srp9 protein_coding retained_intron MGP_CBAJ_T0023672.1 MGP_CBAJ_G0016626.1 mouse_genomes_project 1 202073769 202074825 + Srp9 protein_coding retained_intron MGP_CBAJ_T0000544.1 MGP_CBAJ_G0000486.1 mouse_genomes_project 1 114721895 114727130 + TEC TEC MGP_CBAJ_T0005679.1 MGP_CBAJ_G0004762.1 mouse_genomes_project 1 69526374 69529194 + Gm29152 lincRNA lincRNA MGP_CBAJ_T0002719.1 MGP_CBAJ_G0002585.1 mouse_genomes_project 1 39721004 39729564 + Gm16152 antisense antisense MGP_CBAJ_T0002720.1 MGP_CBAJ_G0002585.1 mouse_genomes_project 1 39724411 39725841 + Gm16152 antisense antisense MGP_CBAJ_T0002779.1 MGP_CBAJ_G0002629.1 mouse_genomes_project 1 94450764 94598844 - Gm28375 antisense antisense MGP_CBAJ_T0012231.1 MGP_CBAJ_G0010343.1 mouse_genomes_project 1 214135969 214136084 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098554.1 MGP_CBAJ_G0036809.1 mouse_genomes_project 1 116057846 116057953 + Gm26214 snRNA snRNA MGP_CBAJ_T0012000.1 MGP_CBAJ_G0010112.1 mouse_genomes_project 1 96636611 96637070 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016734.1 MGP_CBAJ_G0014834.1 mouse_genomes_project 1 46169447 46192899 - Gm29247 processed_transcript processed_transcript MGP_CBAJ_T0016735.1 MGP_CBAJ_G0014834.1 mouse_genomes_project 1 46169548 46193643 - Gm29247 processed_transcript processed_transcript MGP_CBAJ_T0023939.1 MGP_CBAJ_G0016685.1 mouse_genomes_project 1 213014233 213030297 + MGP_CBAJ_P0023939 Rd3 protein_coding protein_coding MGP_CBAJ_T0023940.1 MGP_CBAJ_G0016685.1 mouse_genomes_project 1 213014236 213028408 + MGP_CBAJ_P0023940 Rd3 protein_coding protein_coding MGP_CBAJ_T0023941.1 MGP_CBAJ_G0016685.1 mouse_genomes_project 1 213015095 213028407 + MGP_CBAJ_P0023941 Rd3 protein_coding protein_coding MGP_CBAJ_T0023942.1 MGP_CBAJ_G0016685.1 mouse_genomes_project 1 213021008 213028408 + Rd3 protein_coding retained_intron MGP_CBAJ_T0023456.1 MGP_CBAJ_G0016582.1 mouse_genomes_project 1 196091732 196343511 - MGP_CBAJ_P0023456 Akt3 protein_coding protein_coding MGP_CBAJ_T0023457.1 MGP_CBAJ_G0016582.1 mouse_genomes_project 1 196093774 196343482 - MGP_CBAJ_P0023457 Akt3 protein_coding protein_coding MGP_CBAJ_T0023458.1 MGP_CBAJ_G0016582.1 mouse_genomes_project 1 196093775 196353993 - MGP_CBAJ_P0023458 Akt3 protein_coding protein_coding MGP_CBAJ_T0019845.1 MGP_CBAJ_G0015817.1 mouse_genomes_project 1 64572469 64735493 + MGP_CBAJ_P0019845 Nbeal1 protein_coding protein_coding MGP_CBAJ_T0019846.1 MGP_CBAJ_G0015817.1 mouse_genomes_project 1 64572682 64577769 + Nbeal1 protein_coding retained_intron MGP_CBAJ_T0019847.1 MGP_CBAJ_G0015817.1 mouse_genomes_project 1 64619042 64632394 + MGP_CBAJ_P0019847 Nbeal1 protein_coding protein_coding MGP_CBAJ_T0019848.1 MGP_CBAJ_G0015817.1 mouse_genomes_project 1 64624062 64626739 + Nbeal1 protein_coding retained_intron MGP_CBAJ_T0019849.1 MGP_CBAJ_G0015817.1 mouse_genomes_project 1 64632296 64682066 + Nbeal1 protein_coding retained_intron MGP_CBAJ_T0019850.1 MGP_CBAJ_G0015817.1 mouse_genomes_project 1 64660214 64721758 + MGP_CBAJ_P0019850 Nbeal1 protein_coding protein_coding MGP_CBAJ_T0019851.1 MGP_CBAJ_G0015817.1 mouse_genomes_project 1 64660222 64728775 + MGP_CBAJ_P0019851 Nbeal1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019852.1 MGP_CBAJ_G0015817.1 mouse_genomes_project 1 64666047 64669265 + Nbeal1 protein_coding retained_intron MGP_CBAJ_T0019853.1 MGP_CBAJ_G0015817.1 mouse_genomes_project 1 64678797 64691807 + MGP_CBAJ_P0019853 Nbeal1 protein_coding protein_coding MGP_CBAJ_T0019854.1 MGP_CBAJ_G0015817.1 mouse_genomes_project 1 64683962 64686224 + Nbeal1 protein_coding retained_intron MGP_CBAJ_T0021310.1 MGP_CBAJ_G0016110.1 mouse_genomes_project 1 116304051 116542429 + MGP_CBAJ_P0021310 Phlpp1 protein_coding protein_coding MGP_CBAJ_T0021311.1 MGP_CBAJ_G0016110.1 mouse_genomes_project 1 116423381 116429380 + Phlpp1 protein_coding retained_intron MGP_CBAJ_T0021312.1 MGP_CBAJ_G0016110.1 mouse_genomes_project 1 116452254 116454022 + Phlpp1 protein_coding processed_transcript MGP_CBAJ_T0011849.1 MGP_CBAJ_G0009961.1 mouse_genomes_project 1 40306730 40307502 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098535.1 MGP_CBAJ_G0036790.1 mouse_genomes_project 1 69906029 69906189 - Gm24788 snRNA snRNA MGP_CBAJ_T0005680.1 MGP_CBAJ_G0004763.1 mouse_genomes_project 1 72429137 72522810 + Gm15668 lincRNA lincRNA MGP_CBAJ_T0000490.1 MGP_CBAJ_G0000432.1 mouse_genomes_project 1 84932259 84933738 - TEC TEC MGP_CBAJ_T0000749.1 MGP_CBAJ_G0000687.1 mouse_genomes_project 1 207132743 207134618 - TEC TEC MGP_CBAJ_T0000545.1 MGP_CBAJ_G0000487.1 mouse_genomes_project 1 114876841 114879801 + TEC TEC MGP_CBAJ_T0019092.1 MGP_CBAJ_G0015677.1 mouse_genomes_project 1 38183541 38247198 + MGP_CBAJ_P0019092 Vwa3b protein_coding protein_coding MGP_CBAJ_T0019093.1 MGP_CBAJ_G0015677.1 mouse_genomes_project 1 38186265 38230946 + MGP_CBAJ_P0019093 Vwa3b protein_coding non_stop_decay MGP_CBAJ_T0019094.1 MGP_CBAJ_G0015677.1 mouse_genomes_project 1 38186277 38247197 + MGP_CBAJ_P0019094 Vwa3b protein_coding protein_coding MGP_CBAJ_T0019095.1 MGP_CBAJ_G0015677.1 mouse_genomes_project 1 38186345 38246927 + MGP_CBAJ_P0019095 Vwa3b protein_coding protein_coding MGP_CBAJ_T0019096.1 MGP_CBAJ_G0015677.1 mouse_genomes_project 1 38194158 38379438 + MGP_CBAJ_P0019096 Vwa3b protein_coding nonsense_mediated_decay MGP_CBAJ_T0019097.1 MGP_CBAJ_G0015677.1 mouse_genomes_project 1 38194204 38379598 + MGP_CBAJ_P0019097 Vwa3b protein_coding unknown_likely_coding MGP_CBAJ_T0019098.1 MGP_CBAJ_G0015677.1 mouse_genomes_project 1 38270433 38278976 + Vwa3b protein_coding retained_intron MGP_CBAJ_T0019099.1 MGP_CBAJ_G0015677.1 mouse_genomes_project 1 38270570 38301280 + Vwa3b protein_coding processed_transcript MGP_CBAJ_T0019100.1 MGP_CBAJ_G0015677.1 mouse_genomes_project 1 38310250 38319115 + MGP_CBAJ_P0019100 Vwa3b protein_coding protein_coding MGP_CBAJ_T0019101.1 MGP_CBAJ_G0015677.1 mouse_genomes_project 1 38334082 38380434 + MGP_CBAJ_P0019101 Vwa3b protein_coding protein_coding MGP_CBAJ_T0019102.1 MGP_CBAJ_G0015677.1 mouse_genomes_project 1 38379683 38380442 + Vwa3b protein_coding retained_intron MGP_CBAJ_T0012233.1 MGP_CBAJ_G0010345.1 mouse_genomes_project 1 215009127 215010055 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005650.1 MGP_CBAJ_G0004739.1 mouse_genomes_project 1 60323613 60325666 + Gm28240 lincRNA lincRNA MGP_CBAJ_T0019858.1 MGP_CBAJ_G0015819.1 mouse_genomes_project 1 64823158 64900676 + MGP_CBAJ_P0019858 Abi2 protein_coding protein_coding MGP_CBAJ_T0019859.1 MGP_CBAJ_G0015819.1 mouse_genomes_project 1 64823234 64896606 + MGP_CBAJ_P0019859 Abi2 protein_coding protein_coding MGP_CBAJ_T0019860.1 MGP_CBAJ_G0015819.1 mouse_genomes_project 1 64823234 64900676 + MGP_CBAJ_P0019860 Abi2 protein_coding protein_coding MGP_CBAJ_T0019861.1 MGP_CBAJ_G0015819.1 mouse_genomes_project 1 64823273 64899036 + MGP_CBAJ_P0019861 Abi2 protein_coding protein_coding MGP_CBAJ_T0019862.1 MGP_CBAJ_G0015819.1 mouse_genomes_project 1 64823320 64862489 + Abi2 protein_coding retained_intron MGP_CBAJ_T0019863.1 MGP_CBAJ_G0015819.1 mouse_genomes_project 1 64823334 64865015 + MGP_CBAJ_P0019863 Abi2 protein_coding protein_coding MGP_CBAJ_T0019864.1 MGP_CBAJ_G0015819.1 mouse_genomes_project 1 64823342 64896676 + MGP_CBAJ_P0019864 Abi2 protein_coding protein_coding MGP_CBAJ_T0019865.1 MGP_CBAJ_G0015819.1 mouse_genomes_project 1 64823347 64850052 + Abi2 protein_coding retained_intron MGP_CBAJ_T0019866.1 MGP_CBAJ_G0015819.1 mouse_genomes_project 1 64852630 64897276 + MGP_CBAJ_P0019866 Abi2 protein_coding protein_coding MGP_CBAJ_T0019867.1 MGP_CBAJ_G0015819.1 mouse_genomes_project 1 64852754 64896438 + MGP_CBAJ_P0019867 Abi2 protein_coding protein_coding MGP_CBAJ_T0019868.1 MGP_CBAJ_G0015819.1 mouse_genomes_project 1 64852759 64896601 + MGP_CBAJ_P0019868 Abi2 protein_coding protein_coding MGP_CBAJ_T0019869.1 MGP_CBAJ_G0015819.1 mouse_genomes_project 1 64854489 64896822 + MGP_CBAJ_P0019869 Abi2 protein_coding protein_coding MGP_CBAJ_T0019196.1 MGP_CBAJ_G0015694.1 mouse_genomes_project 1 40158576 40205060 - MGP_CBAJ_P0019196 Lonrf2 protein_coding protein_coding MGP_CBAJ_T0019197.1 MGP_CBAJ_G0015694.1 mouse_genomes_project 1 40159369 40189876 - MGP_CBAJ_P0019197 Lonrf2 protein_coding protein_coding MGP_CBAJ_T0019198.1 MGP_CBAJ_G0015694.1 mouse_genomes_project 1 40203828 40205006 - Lonrf2 protein_coding retained_intron MGP_CBAJ_T0011775.1 MGP_CBAJ_G0009887.1 mouse_genomes_project 1 15781646 15782025 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000553.1 MGP_CBAJ_G0000495.1 mouse_genomes_project 1 121634194 121636947 - TEC TEC MGP_CBAJ_T0011888.1 MGP_CBAJ_G0010000.1 mouse_genomes_project 1 52397961 52398398 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016789.1 MGP_CBAJ_G0014854.1 mouse_genomes_project 1 153131604 153134894 + Gm37423 processed_transcript retained_intron MGP_CBAJ_T0020409.1 MGP_CBAJ_G0015923.1 mouse_genomes_project 1 81309988 81319100 + MGP_CBAJ_P0020409 Dnajb2 protein_coding protein_coding MGP_CBAJ_T0020410.1 MGP_CBAJ_G0015923.1 mouse_genomes_project 1 81310047 81318216 + MGP_CBAJ_P0020410 Dnajb2 protein_coding protein_coding MGP_CBAJ_T0020411.1 MGP_CBAJ_G0015923.1 mouse_genomes_project 1 81310047 81318216 + MGP_CBAJ_P0020411 Dnajb2 protein_coding protein_coding MGP_CBAJ_T0020412.1 MGP_CBAJ_G0015923.1 mouse_genomes_project 1 81310051 81319104 + MGP_CBAJ_P0020412 Dnajb2 protein_coding protein_coding MGP_CBAJ_T0020413.1 MGP_CBAJ_G0015923.1 mouse_genomes_project 1 81310069 81319102 + MGP_CBAJ_P0020413 Dnajb2 protein_coding protein_coding MGP_CBAJ_T0020414.1 MGP_CBAJ_G0015923.1 mouse_genomes_project 1 81310095 81318467 + MGP_CBAJ_P0020414 Dnajb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020415.1 MGP_CBAJ_G0015923.1 mouse_genomes_project 1 81310138 81319102 + MGP_CBAJ_P0020415 Dnajb2 protein_coding protein_coding MGP_CBAJ_T0020416.1 MGP_CBAJ_G0015923.1 mouse_genomes_project 1 81310196 81312928 + MGP_CBAJ_P0020416 Dnajb2 protein_coding protein_coding MGP_CBAJ_T0020417.1 MGP_CBAJ_G0015923.1 mouse_genomes_project 1 81310354 81311264 + Dnajb2 protein_coding retained_intron MGP_CBAJ_T0020418.1 MGP_CBAJ_G0015923.1 mouse_genomes_project 1 81310657 81311107 + Dnajb2 protein_coding retained_intron MGP_CBAJ_T0020419.1 MGP_CBAJ_G0015923.1 mouse_genomes_project 1 81312518 81314327 + Dnajb2 protein_coding retained_intron MGP_CBAJ_T0020420.1 MGP_CBAJ_G0015923.1 mouse_genomes_project 1 81314814 81318339 + MGP_CBAJ_P0020420 Dnajb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012234.1 MGP_CBAJ_G0010346.1 mouse_genomes_project 1 216052527 216052885 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009352.1 MGP_CBAJ_G0007490.1 mouse_genomes_project 1 19602004 19602123 + Mir133b miRNA miRNA MGP_CBAJ_T0018851.1 MGP_CBAJ_G0015633.1 mouse_genomes_project 1 23655847 23882629 - Col19a1 protein_coding processed_transcript MGP_CBAJ_T0018852.1 MGP_CBAJ_G0015633.1 mouse_genomes_project 1 23657950 24021317 - MGP_CBAJ_P0018852 Col19a1 protein_coding protein_coding MGP_CBAJ_T0018853.1 MGP_CBAJ_G0015633.1 mouse_genomes_project 1 23674580 24021256 - MGP_CBAJ_P0018853 Col19a1 protein_coding protein_coding MGP_CBAJ_T0011941.1 MGP_CBAJ_G0010053.1 mouse_genomes_project 1 68080051 68080631 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018709.1 MGP_CBAJ_G0015599.1 mouse_genomes_project 1 14656749 14978476 - MGP_CBAJ_P0018709 Stau2 protein_coding protein_coding MGP_CBAJ_T0018710.1 MGP_CBAJ_G0015599.1 mouse_genomes_project 1 14656876 14978398 - MGP_CBAJ_P0018710 Stau2 protein_coding protein_coding MGP_CBAJ_T0018711.1 MGP_CBAJ_G0015599.1 mouse_genomes_project 1 14656879 14978398 - MGP_CBAJ_P0018711 Stau2 protein_coding protein_coding MGP_CBAJ_T0018712.1 MGP_CBAJ_G0015599.1 mouse_genomes_project 1 14656885 14978476 - MGP_CBAJ_P0018712 Stau2 protein_coding protein_coding MGP_CBAJ_T0018713.1 MGP_CBAJ_G0015599.1 mouse_genomes_project 1 14656891 14979719 - MGP_CBAJ_P0018713 Stau2 protein_coding protein_coding MGP_CBAJ_T0018714.1 MGP_CBAJ_G0015599.1 mouse_genomes_project 1 14781977 14978364 - MGP_CBAJ_P0018714 Stau2 protein_coding protein_coding MGP_CBAJ_T0018715.1 MGP_CBAJ_G0015599.1 mouse_genomes_project 1 14782056 14978417 - MGP_CBAJ_P0018715 Stau2 protein_coding protein_coding MGP_CBAJ_T0018716.1 MGP_CBAJ_G0015599.1 mouse_genomes_project 1 14782141 14979674 - MGP_CBAJ_P0018716 Stau2 protein_coding protein_coding MGP_CBAJ_T0018717.1 MGP_CBAJ_G0015599.1 mouse_genomes_project 1 14782766 14815124 - Stau2 protein_coding processed_transcript MGP_CBAJ_T0018718.1 MGP_CBAJ_G0015599.1 mouse_genomes_project 1 14782859 14978410 - MGP_CBAJ_P0018718 Stau2 protein_coding protein_coding MGP_CBAJ_T0018719.1 MGP_CBAJ_G0015599.1 mouse_genomes_project 1 14782867 14978423 - MGP_CBAJ_P0018719 Stau2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018720.1 MGP_CBAJ_G0015599.1 mouse_genomes_project 1 14784162 14978477 - MGP_CBAJ_P0018720 Stau2 protein_coding protein_coding MGP_CBAJ_T0018721.1 MGP_CBAJ_G0015599.1 mouse_genomes_project 1 14832286 14978440 - MGP_CBAJ_P0018721 Stau2 protein_coding protein_coding MGP_CBAJ_T0018722.1 MGP_CBAJ_G0015599.1 mouse_genomes_project 1 14883466 14979687 - MGP_CBAJ_P0018722 Stau2 protein_coding protein_coding MGP_CBAJ_T0018723.1 MGP_CBAJ_G0015599.1 mouse_genomes_project 1 14912362 14978430 - MGP_CBAJ_P0018723 Stau2 protein_coding protein_coding MGP_CBAJ_T0018724.1 MGP_CBAJ_G0015599.1 mouse_genomes_project 1 14912751 14979628 - MGP_CBAJ_P0018724 Stau2 protein_coding protein_coding MGP_CBAJ_T0018725.1 MGP_CBAJ_G0015599.1 mouse_genomes_project 1 14912860 14979627 - MGP_CBAJ_P0018725 Stau2 protein_coding protein_coding MGP_CBAJ_T0021713.1 MGP_CBAJ_G0016205.1 mouse_genomes_project 1 145286930 145307641 + MGP_CBAJ_P0021713 Elk4 protein_coding protein_coding MGP_CBAJ_T0021714.1 MGP_CBAJ_G0016205.1 mouse_genomes_project 1 145287196 145304855 + MGP_CBAJ_P0021714 Elk4 protein_coding protein_coding MGP_CBAJ_T0021715.1 MGP_CBAJ_G0016205.1 mouse_genomes_project 1 145287419 145294569 + Elk4 protein_coding processed_transcript MGP_CBAJ_T0021716.1 MGP_CBAJ_G0016205.1 mouse_genomes_project 1 145287429 145294427 + Elk4 protein_coding processed_transcript MGP_CBAJ_T0021717.1 MGP_CBAJ_G0016205.1 mouse_genomes_project 1 145287617 145298240 + MGP_CBAJ_P0021717 Elk4 protein_coding protein_coding MGP_CBAJ_T0021718.1 MGP_CBAJ_G0016205.1 mouse_genomes_project 1 145297742 145314140 + MGP_CBAJ_P0021718 Elk4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021719.1 MGP_CBAJ_G0016205.1 mouse_genomes_project 1 145298377 145313222 + Elk4 protein_coding processed_transcript MGP_CBAJ_T0009435.1 MGP_CBAJ_G0007573.1 mouse_genomes_project 1 189887037 189887098 - Mir7683 miRNA miRNA MGP_CBAJ_T0005557.1 MGP_CBAJ_G0004673.1 mouse_genomes_project 1 4913491 4916128 - lincRNA retained_intron MGP_CBAJ_T0021636.1 MGP_CBAJ_G0016185.1 mouse_genomes_project 1 144085531 144090912 - MGP_CBAJ_P0021636 Il24 protein_coding protein_coding MGP_CBAJ_T0021637.1 MGP_CBAJ_G0016185.1 mouse_genomes_project 1 144085531 144089454 - MGP_CBAJ_P0021637 Il24 protein_coding protein_coding MGP_CBAJ_T0021638.1 MGP_CBAJ_G0016185.1 mouse_genomes_project 1 144085912 144090797 - MGP_CBAJ_P0021638 Il24 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021639.1 MGP_CBAJ_G0016185.1 mouse_genomes_project 1 144088244 144090871 - MGP_CBAJ_P0021639 Il24 protein_coding nonsense_mediated_decay MGP_CBAJ_T0011747.1 MGP_CBAJ_G0009859.1 mouse_genomes_project 1 6451592 6451786 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0018752.1 MGP_CBAJ_G0015605.1 mouse_genomes_project 1 15657602 15682619 + MGP_CBAJ_P0018752 Gdap1 protein_coding protein_coding MGP_CBAJ_T0018753.1 MGP_CBAJ_G0015605.1 mouse_genomes_project 1 15657644 15677093 + Gdap1 protein_coding retained_intron MGP_CBAJ_T0018754.1 MGP_CBAJ_G0015605.1 mouse_genomes_project 1 15657708 15679979 + MGP_CBAJ_P0018754 Gdap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018755.1 MGP_CBAJ_G0015605.1 mouse_genomes_project 1 15676718 15680397 + Gdap1 protein_coding retained_intron MGP_CBAJ_T0099754.1 MGP_CBAJ_G0038009.1 mouse_genomes_project 1 48032309 48032440 + Gm23974 snoRNA snoRNA MGP_CBAJ_T0023684.1 MGP_CBAJ_G0016630.1 mouse_genomes_project 1 202442204 202496221 - MGP_CBAJ_P0023684 Capn2 protein_coding protein_coding MGP_CBAJ_T0023685.1 MGP_CBAJ_G0016630.1 mouse_genomes_project 1 202445159 202454763 - Capn2 protein_coding retained_intron MGP_CBAJ_T0023686.1 MGP_CBAJ_G0016630.1 mouse_genomes_project 1 202447477 202456450 - Capn2 protein_coding retained_intron MGP_CBAJ_T0023687.1 MGP_CBAJ_G0016630.1 mouse_genomes_project 1 202458826 202469782 - Capn2 protein_coding retained_intron MGP_CBAJ_T0023688.1 MGP_CBAJ_G0016630.1 mouse_genomes_project 1 202458831 202496305 - Capn2 protein_coding retained_intron MGP_CBAJ_T0005770.1 MGP_CBAJ_G0004834.1 mouse_genomes_project 1 110687989 110707331 + Gm20268 lincRNA lincRNA MGP_CBAJ_T0018986.1 MGP_CBAJ_G0015659.1 mouse_genomes_project 1 35731810 35755627 + MGP_CBAJ_P0018986 Plekhb2 protein_coding protein_coding MGP_CBAJ_T0018987.1 MGP_CBAJ_G0015659.1 mouse_genomes_project 1 35731826 35761236 + MGP_CBAJ_P0018987 Plekhb2 protein_coding protein_coding MGP_CBAJ_T0018988.1 MGP_CBAJ_G0015659.1 mouse_genomes_project 1 35733440 35745250 + MGP_CBAJ_P0018988 Plekhb2 protein_coding protein_coding MGP_CBAJ_T0018989.1 MGP_CBAJ_G0015659.1 mouse_genomes_project 1 35759311 35761233 + Plekhb2 protein_coding processed_transcript MGP_CBAJ_T0012095.1 MGP_CBAJ_G0010207.1 mouse_genomes_project 1 140888978 140889458 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018707.1 MGP_CBAJ_G0015598.1 mouse_genomes_project 1 14505724 14546712 + MGP_CBAJ_P0018707 Rdh10 protein_coding protein_coding MGP_CBAJ_T0018708.1 MGP_CBAJ_G0015598.1 mouse_genomes_project 1 14543207 14545252 + Rdh10 protein_coding retained_intron MGP_CBAJ_T0011761.1 MGP_CBAJ_G0009873.1 mouse_genomes_project 1 9105770 9106379 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005826.1 MGP_CBAJ_G0004881.1 mouse_genomes_project 1 150469578 150472112 - Gm33994 lincRNA lincRNA MGP_CBAJ_T0098565.1 MGP_CBAJ_G0036820.1 mouse_genomes_project 1 144289760 144289854 - Gm25549 snRNA snRNA MGP_CBAJ_T0011120.1 MGP_CBAJ_G0009258.1 mouse_genomes_project 1 53518591 53518905 + Gm25843 misc_RNA misc_RNA MGP_CBAJ_T0012174.1 MGP_CBAJ_G0010286.1 mouse_genomes_project 1 181374266 181374655 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012039.1 MGP_CBAJ_G0010151.1 mouse_genomes_project 1 116070517 116071055 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005796.1 MGP_CBAJ_G0004854.1 mouse_genomes_project 1 132728153 132733276 + Gm29346 lincRNA lincRNA MGP_CBAJ_T0011905.1 MGP_CBAJ_G0010017.1 mouse_genomes_project 1 58738382 58740235 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005806.1 MGP_CBAJ_G0004861.1 mouse_genomes_project 1 134346848 134396567 + Gm28590 lincRNA lincRNA MGP_CBAJ_T0000738.1 MGP_CBAJ_G0000677.1 mouse_genomes_project 1 201911721 201913874 - TEC TEC MGP_CBAJ_T0011962.1 MGP_CBAJ_G0010074.1 mouse_genomes_project 1 76804449 76805224 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011751.1 MGP_CBAJ_G0009863.1 mouse_genomes_project 1 6941838 6942356 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012196.1 MGP_CBAJ_G0010308.1 mouse_genomes_project 1 195342176 195342693 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011957.1 MGP_CBAJ_G0010069.1 mouse_genomes_project 1 72824891 72826875 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002778.1 MGP_CBAJ_G0002628.1 mouse_genomes_project 1 93705770 93706635 - Gm28626 antisense antisense MGP_CBAJ_T0012031.1 MGP_CBAJ_G0010143.1 mouse_genomes_project 1 112135469 112135736 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011716.1 MGP_CBAJ_G0009828.1 mouse_genomes_project 1 317872 318350 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0023193.1 MGP_CBAJ_G0016502.1 mouse_genomes_project 1 189645877 189684561 + MGP_CBAJ_P0023193 F11r protein_coding protein_coding MGP_CBAJ_T0023194.1 MGP_CBAJ_G0016502.1 mouse_genomes_project 1 189645921 189674669 + F11r protein_coding retained_intron MGP_CBAJ_T0023195.1 MGP_CBAJ_G0016502.1 mouse_genomes_project 1 189645983 189683970 + MGP_CBAJ_P0023195 F11r protein_coding unknown_likely_coding MGP_CBAJ_T0023196.1 MGP_CBAJ_G0016502.1 mouse_genomes_project 1 189682806 189683601 + F11r protein_coding retained_intron MGP_CBAJ_T0022296.1 MGP_CBAJ_G0016323.1 mouse_genomes_project 1 167277886 167295337 - MGP_CBAJ_P0022296 Rnf2 protein_coding protein_coding MGP_CBAJ_T0022297.1 MGP_CBAJ_G0016323.1 mouse_genomes_project 1 167288876 167320851 - MGP_CBAJ_P0022297 Rnf2 protein_coding protein_coding MGP_CBAJ_T0022298.1 MGP_CBAJ_G0016323.1 mouse_genomes_project 1 167288877 167320991 - MGP_CBAJ_P0022298 Rnf2 protein_coding protein_coding MGP_CBAJ_T0022299.1 MGP_CBAJ_G0016323.1 mouse_genomes_project 1 167290597 167320873 - MGP_CBAJ_P0022299 Rnf2 protein_coding protein_coding MGP_CBAJ_T0022300.1 MGP_CBAJ_G0016323.1 mouse_genomes_project 1 167290629 167291509 - Rnf2 protein_coding retained_intron MGP_CBAJ_T0022301.1 MGP_CBAJ_G0016323.1 mouse_genomes_project 1 167290794 167293294 - Rnf2 protein_coding processed_transcript MGP_CBAJ_T0022302.1 MGP_CBAJ_G0016323.1 mouse_genomes_project 1 167296075 167320834 - MGP_CBAJ_P0022302 Rnf2 protein_coding protein_coding MGP_CBAJ_T0009401.1 MGP_CBAJ_G0007539.1 mouse_genomes_project 1 101691096 101691158 + Mir6901 miRNA miRNA MGP_CBAJ_T0023922.1 MGP_CBAJ_G0016681.1 mouse_genomes_project 1 212553449 212611370 + MGP_CBAJ_P0023922 Ints7 protein_coding protein_coding MGP_CBAJ_T0023923.1 MGP_CBAJ_G0016681.1 mouse_genomes_project 1 212553540 212591606 + Ints7 protein_coding retained_intron MGP_CBAJ_T0023924.1 MGP_CBAJ_G0016681.1 mouse_genomes_project 1 212553555 212606388 + MGP_CBAJ_P0023924 Ints7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023925.1 MGP_CBAJ_G0016681.1 mouse_genomes_project 1 212553575 212590222 + MGP_CBAJ_P0023925 Ints7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023926.1 MGP_CBAJ_G0016681.1 mouse_genomes_project 1 212553575 212607484 + MGP_CBAJ_P0023926 Ints7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023927.1 MGP_CBAJ_G0016681.1 mouse_genomes_project 1 212553589 212563109 + Ints7 protein_coding retained_intron MGP_CBAJ_T0012072.1 MGP_CBAJ_G0010184.1 mouse_genomes_project 1 130997809 130998611 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012038.1 MGP_CBAJ_G0010150.1 mouse_genomes_project 1 115668483 115669100 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0023791.1 MGP_CBAJ_G0016655.1 mouse_genomes_project 1 207142509 207170679 - MGP_CBAJ_P0023791 Rrp15 protein_coding protein_coding MGP_CBAJ_T0023792.1 MGP_CBAJ_G0016655.1 mouse_genomes_project 1 207142623 207170646 - Rrp15 protein_coding retained_intron MGP_CBAJ_T0098580.1 MGP_CBAJ_G0036835.1 mouse_genomes_project 1 185045371 185045478 + Gm24182 snRNA snRNA MGP_CBAJ_T0097877.1 MGP_CBAJ_G0036150.1 mouse_genomes_project 1 148876281 148876382 - Gm26280 rRNA rRNA MGP_CBAJ_T0023916.1 MGP_CBAJ_G0016680.1 mouse_genomes_project 1 212513215 212553335 - MGP_CBAJ_P0023916 Dtl protein_coding nonsense_mediated_decay MGP_CBAJ_T0023917.1 MGP_CBAJ_G0016680.1 mouse_genomes_project 1 212513224 212553358 - MGP_CBAJ_P0023917 Dtl protein_coding protein_coding MGP_CBAJ_T0023918.1 MGP_CBAJ_G0016680.1 mouse_genomes_project 1 212514959 212553328 - Dtl protein_coding processed_transcript MGP_CBAJ_T0023919.1 MGP_CBAJ_G0016680.1 mouse_genomes_project 1 212525657 212553327 - MGP_CBAJ_P0023919 Dtl protein_coding nonsense_mediated_decay MGP_CBAJ_T0023920.1 MGP_CBAJ_G0016680.1 mouse_genomes_project 1 212538236 212553325 - Dtl protein_coding retained_intron MGP_CBAJ_T0023921.1 MGP_CBAJ_G0016680.1 mouse_genomes_project 1 212548634 212553327 - Dtl protein_coding retained_intron MGP_CBAJ_T0012168.1 MGP_CBAJ_G0010280.1 mouse_genomes_project 1 178308878 178310075 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011865.1 MGP_CBAJ_G0009977.1 mouse_genomes_project 1 47072734 47073479 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012076.1 MGP_CBAJ_G0010188.1 mouse_genomes_project 1 131726906 131727136 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0019502.1 MGP_CBAJ_G0015754.1 mouse_genomes_project 1 56025036 56028791 + Hibch protein_coding retained_intron MGP_CBAJ_T0019503.1 MGP_CBAJ_G0015754.1 mouse_genomes_project 1 56025151 56073796 + Hibch protein_coding retained_intron MGP_CBAJ_T0019504.1 MGP_CBAJ_G0015754.1 mouse_genomes_project 1 56025217 56109232 + MGP_CBAJ_P0019504 Hibch protein_coding protein_coding MGP_CBAJ_T0019505.1 MGP_CBAJ_G0015754.1 mouse_genomes_project 1 56031865 56043836 + Hibch protein_coding processed_transcript MGP_CBAJ_T0019506.1 MGP_CBAJ_G0015754.1 mouse_genomes_project 1 56048428 56085827 + Hibch protein_coding processed_transcript MGP_CBAJ_T0019507.1 MGP_CBAJ_G0015754.1 mouse_genomes_project 1 56087139 56102710 + Hibch protein_coding retained_intron MGP_CBAJ_T0099774.1 MGP_CBAJ_G0038029.1 mouse_genomes_project 1 93768551 93768684 - Snora75 snoRNA snoRNA MGP_CBAJ_T0005777.1 MGP_CBAJ_G0004840.1 mouse_genomes_project 1 117670763 117672975 - Gm15391 lincRNA lincRNA MGP_CBAJ_T0011840.1 MGP_CBAJ_G0009952.1 mouse_genomes_project 1 35634839 35634987 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0022332.1 MGP_CBAJ_G0016331.1 mouse_genomes_project 1 168720936 168732952 + MGP_CBAJ_P0022332 Arpc5 protein_coding protein_coding MGP_CBAJ_T0022333.1 MGP_CBAJ_G0016331.1 mouse_genomes_project 1 168720936 168732952 + MGP_CBAJ_P0022333 Arpc5 protein_coding protein_coding MGP_CBAJ_T0022334.1 MGP_CBAJ_G0016331.1 mouse_genomes_project 1 168722880 168728777 + Arpc5 protein_coding retained_intron MGP_CBAJ_T0000614.1 MGP_CBAJ_G0000555.1 mouse_genomes_project 1 151957635 151961509 + TEC TEC MGP_CBAJ_T0005911.1 MGP_CBAJ_G0004948.1 mouse_genomes_project 1 196727069 196732569 - Gm37280 lincRNA lincRNA MGP_CBAJ_T0005785.1 MGP_CBAJ_G0004846.1 mouse_genomes_project 1 130035231 130044668 + Gm28867 lincRNA lincRNA MGP_CBAJ_T0021078.1 MGP_CBAJ_G0016062.1 mouse_genomes_project 1 100952897 100953906 + MGP_CBAJ_P0021078 Olfr1410 protein_coding protein_coding MGP_CBAJ_T0021079.1 MGP_CBAJ_G0016062.1 mouse_genomes_project 1 100952897 100953866 + MGP_CBAJ_P0021079 Olfr1410 protein_coding protein_coding MGP_CBAJ_T0019792.1 MGP_CBAJ_G0015810.1 mouse_genomes_project 1 63838554 63933144 - Sumo1 protein_coding processed_transcript MGP_CBAJ_T0019797.1 MGP_CBAJ_G0015810.1 mouse_genomes_project 1 63896545 63933091 - MGP_CBAJ_P0019797 Sumo1 protein_coding protein_coding MGP_CBAJ_T0019798.1 MGP_CBAJ_G0015810.1 mouse_genomes_project 1 63896591 63933174 - MGP_CBAJ_P0019798 Sumo1 protein_coding unknown_likely_coding MGP_CBAJ_T0019799.1 MGP_CBAJ_G0015810.1 mouse_genomes_project 1 63900387 63933186 - Sumo1 protein_coding retained_intron MGP_CBAJ_T0020726.1 MGP_CBAJ_G0015982.1 mouse_genomes_project 1 93421224 93435490 + MGP_CBAJ_P0020726 2810459M11Rik protein_coding protein_coding MGP_CBAJ_T0020727.1 MGP_CBAJ_G0015982.1 mouse_genomes_project 1 93421224 93433387 + MGP_CBAJ_P0020727 2810459M11Rik protein_coding protein_coding MGP_CBAJ_T0012096.1 MGP_CBAJ_G0010208.1 mouse_genomes_project 1 141301071 141301659 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0019800.1 MGP_CBAJ_G0015811.1 mouse_genomes_project 1 63950384 63958080 + Nop58 protein_coding processed_transcript MGP_CBAJ_T0019801.1 MGP_CBAJ_G0015811.1 mouse_genomes_project 1 63950390 63979768 + MGP_CBAJ_P0019801 Nop58 protein_coding protein_coding MGP_CBAJ_T0019802.1 MGP_CBAJ_G0015811.1 mouse_genomes_project 1 63950398 63964355 + MGP_CBAJ_P0019802 Nop58 protein_coding protein_coding MGP_CBAJ_T0019803.1 MGP_CBAJ_G0015811.1 mouse_genomes_project 1 63950416 63958102 + Nop58 protein_coding retained_intron MGP_CBAJ_T0019804.1 MGP_CBAJ_G0015811.1 mouse_genomes_project 1 63950419 63956403 + Nop58 protein_coding retained_intron MGP_CBAJ_T0019805.1 MGP_CBAJ_G0015811.1 mouse_genomes_project 1 63950422 63987293 + MGP_CBAJ_P0019805 Nop58 protein_coding protein_coding MGP_CBAJ_T0019806.1 MGP_CBAJ_G0015811.1 mouse_genomes_project 1 63950434 63964330 + MGP_CBAJ_P0019806 Nop58 protein_coding protein_coding MGP_CBAJ_T0019807.1 MGP_CBAJ_G0015811.1 mouse_genomes_project 1 63950467 63966700 + MGP_CBAJ_P0019807 Nop58 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019808.1 MGP_CBAJ_G0015811.1 mouse_genomes_project 1 63955592 63966664 + Nop58 protein_coding retained_intron MGP_CBAJ_T0019809.1 MGP_CBAJ_G0015811.1 mouse_genomes_project 1 63957857 63972487 + Nop58 protein_coding retained_intron MGP_CBAJ_T0019810.1 MGP_CBAJ_G0015811.1 mouse_genomes_project 1 63964304 63972439 + MGP_CBAJ_P0019810 Nop58 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019811.1 MGP_CBAJ_G0015811.1 mouse_genomes_project 1 63966693 63975322 + MGP_CBAJ_P0019811 Nop58 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019812.1 MGP_CBAJ_G0015811.1 mouse_genomes_project 1 63972436 63977357 + MGP_CBAJ_P0019812 Nop58 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019813.1 MGP_CBAJ_G0015811.1 mouse_genomes_project 1 63972475 63979537 + MGP_CBAJ_P0019813 Nop58 protein_coding protein_coding MGP_CBAJ_T0019814.1 MGP_CBAJ_G0015811.1 mouse_genomes_project 1 63972986 63979538 + MGP_CBAJ_P0019814 Nop58 protein_coding protein_coding MGP_CBAJ_T0000496.1 MGP_CBAJ_G0000438.1 mouse_genomes_project 1 86967858 86971093 - TEC TEC MGP_CBAJ_T0098576.1 MGP_CBAJ_G0036831.1 mouse_genomes_project 1 166826821 166826928 - Gm22756 snRNA snRNA MGP_CBAJ_T0098242.1 MGP_CBAJ_G0036514.1 mouse_genomes_project 1 153140694 153142274 + 4930596I21Rik sense_intronic sense_intronic MGP_CBAJ_T0018549.1 MGP_CBAJ_G0015571.1 mouse_genomes_project 1 7391974 7424639 - MGP_CBAJ_P0018549 Mybl1 protein_coding protein_coding MGP_CBAJ_T0018550.1 MGP_CBAJ_G0015571.1 mouse_genomes_project 1 7394078 7424454 - MGP_CBAJ_P0018550 Mybl1 protein_coding protein_coding MGP_CBAJ_T0018551.1 MGP_CBAJ_G0015571.1 mouse_genomes_project 1 7400671 7403147 - Mybl1 protein_coding retained_intron MGP_CBAJ_T0018552.1 MGP_CBAJ_G0015571.1 mouse_genomes_project 1 7402808 7407978 - Mybl1 protein_coding retained_intron MGP_CBAJ_T0018553.1 MGP_CBAJ_G0015571.1 mouse_genomes_project 1 7406373 7424084 - MGP_CBAJ_P0018553 Mybl1 protein_coding protein_coding MGP_CBAJ_T0098560.1 MGP_CBAJ_G0036815.1 mouse_genomes_project 1 134685054 134685203 + Gm24547 snRNA snRNA MGP_CBAJ_T0002702.1 MGP_CBAJ_G0002571.1 mouse_genomes_project 1 20231969 20263190 - Gm28836 antisense antisense MGP_CBAJ_T0000692.1 MGP_CBAJ_G0000632.1 mouse_genomes_project 1 181809907 181814118 + TEC TEC MGP_CBAJ_T0012036.1 MGP_CBAJ_G0010148.1 mouse_genomes_project 1 115316690 115317016 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0023570.1 MGP_CBAJ_G0016604.1 mouse_genomes_project 1 199938797 200046483 + MGP_CBAJ_P0023570 Itpkb protein_coding protein_coding MGP_CBAJ_T0023571.1 MGP_CBAJ_G0016604.1 mouse_genomes_project 1 199942180 199946875 + Itpkb protein_coding retained_intron MGP_CBAJ_T0000640.1 MGP_CBAJ_G0000580.1 mouse_genomes_project 1 164980980 164982436 - TEC TEC MGP_CBAJ_T0098555.1 MGP_CBAJ_G0036810.1 mouse_genomes_project 1 118093237 118093332 - Gm24267 snRNA snRNA MGP_CBAJ_T0012069.1 MGP_CBAJ_G0010181.1 mouse_genomes_project 1 130360616 130360930 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005908.1 MGP_CBAJ_G0004945.1 mouse_genomes_project 1 195273719 195277276 + Gm38101 lincRNA lincRNA MGP_CBAJ_T0020083.1 MGP_CBAJ_G0015863.1 mouse_genomes_project 1 74989983 75168328 - MGP_CBAJ_P0020083 Ikzf2 protein_coding protein_coding MGP_CBAJ_T0020084.1 MGP_CBAJ_G0015863.1 mouse_genomes_project 1 74996813 75168393 - MGP_CBAJ_P0020084 Ikzf2 protein_coding protein_coding MGP_CBAJ_T0020085.1 MGP_CBAJ_G0015863.1 mouse_genomes_project 1 74997358 75169745 - MGP_CBAJ_P0020085 Ikzf2 protein_coding protein_coding MGP_CBAJ_T0020086.1 MGP_CBAJ_G0015863.1 mouse_genomes_project 1 74997544 75166668 - MGP_CBAJ_P0020086 Ikzf2 protein_coding protein_coding MGP_CBAJ_T0020087.1 MGP_CBAJ_G0015863.1 mouse_genomes_project 1 74997544 75166668 - MGP_CBAJ_P0020087 Ikzf2 protein_coding protein_coding MGP_CBAJ_T0020088.1 MGP_CBAJ_G0015863.1 mouse_genomes_project 1 74997544 75166668 - MGP_CBAJ_P0020088 Ikzf2 protein_coding protein_coding MGP_CBAJ_T0020089.1 MGP_CBAJ_G0015863.1 mouse_genomes_project 1 75040743 75167807 - MGP_CBAJ_P0020089 Ikzf2 protein_coding protein_coding MGP_CBAJ_T0020090.1 MGP_CBAJ_G0015863.1 mouse_genomes_project 1 75164068 75167047 - Ikzf2 protein_coding retained_intron MGP_CBAJ_T0020091.1 MGP_CBAJ_G0015863.1 mouse_genomes_project 1 75164069 75169640 - Ikzf2 protein_coding retained_intron MGP_CBAJ_T0012087.1 MGP_CBAJ_G0010199.1 mouse_genomes_project 1 135418370 135418487 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0022268.1 MGP_CBAJ_G0016319.1 mouse_genomes_project 1 166263536 166745484 - MGP_CBAJ_P0022268 Hmcn1 protein_coding protein_coding MGP_CBAJ_T0022269.1 MGP_CBAJ_G0016319.1 mouse_genomes_project 1 166264539 166745484 - MGP_CBAJ_P0022269 Hmcn1 protein_coding protein_coding MGP_CBAJ_T0022270.1 MGP_CBAJ_G0016319.1 mouse_genomes_project 1 166264696 166289228 - MGP_CBAJ_P0022270 Hmcn1 protein_coding protein_coding MGP_CBAJ_T0022271.1 MGP_CBAJ_G0016319.1 mouse_genomes_project 1 166264723 166266617 - Hmcn1 protein_coding retained_intron MGP_CBAJ_T0022272.1 MGP_CBAJ_G0016319.1 mouse_genomes_project 1 166283452 166286633 - Hmcn1 protein_coding processed_transcript MGP_CBAJ_T0022273.1 MGP_CBAJ_G0016319.1 mouse_genomes_project 1 166616343 166745868 - Hmcn1 protein_coding retained_intron MGP_CBAJ_T0022407.1 MGP_CBAJ_G0016346.1 mouse_genomes_project 1 170024462 170027669 + MGP_CBAJ_P0022407 Teddm1a protein_coding protein_coding MGP_CBAJ_T0009398.1 MGP_CBAJ_G0007536.1 mouse_genomes_project 1 95698085 95698195 + Gm25198 miRNA miRNA MGP_CBAJ_T0012077.1 MGP_CBAJ_G0010189.1 mouse_genomes_project 1 131751473 131752137 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098511.1 MGP_CBAJ_G0036766.1 mouse_genomes_project 1 7564570 7564675 - Gm22607 snRNA snRNA MGP_CBAJ_T0002695.1 MGP_CBAJ_G0002566.1 mouse_genomes_project 1 16253778 16302717 - Gm16070 antisense antisense MGP_CBAJ_T0002696.1 MGP_CBAJ_G0002566.1 mouse_genomes_project 1 16276080 16303079 - Gm16070 antisense antisense MGP_CBAJ_T0002697.1 MGP_CBAJ_G0002566.1 mouse_genomes_project 1 16300416 16302688 - Gm16070 antisense antisense MGP_CBAJ_T0011832.1 MGP_CBAJ_G0009944.1 mouse_genomes_project 1 34739301 34739635 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000593.1 MGP_CBAJ_G0000535.1 mouse_genomes_project 1 144575202 144576584 - TEC TEC MGP_CBAJ_T0002708.1 MGP_CBAJ_G0002576.1 mouse_genomes_project 1 37111174 37112237 - Gm37335 antisense antisense MGP_CBAJ_T0012005.1 MGP_CBAJ_G0010117.1 mouse_genomes_project 1 99476900 99481391 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0020909.1 MGP_CBAJ_G0016020.1 mouse_genomes_project 1 95835202 95995691 + MGP_CBAJ_P0020909 protein_coding protein_coding MGP_CBAJ_T0020911.1 MGP_CBAJ_G0016020.1 mouse_genomes_project 1 95894204 95992982 + MGP_CBAJ_P0020911 protein_coding protein_coding MGP_CBAJ_T0009351.1 MGP_CBAJ_G0007489.1 mouse_genomes_project 1 19598260 19598333 + Mir206 miRNA miRNA MGP_CBAJ_T0002916.1 MGP_CBAJ_G0002738.1 mouse_genomes_project 1 210666202 210670866 + Gm37422 antisense antisense MGP_CBAJ_T0020628.1 MGP_CBAJ_G0015962.1 mouse_genomes_project 1 89784311 89853263 + MGP_CBAJ_P0020628 Agfg1 protein_coding protein_coding MGP_CBAJ_T0020629.1 MGP_CBAJ_G0015962.1 mouse_genomes_project 1 89784325 89848462 + MGP_CBAJ_P0020629 Agfg1 protein_coding protein_coding MGP_CBAJ_T0020630.1 MGP_CBAJ_G0015962.1 mouse_genomes_project 1 89784504 89848462 + MGP_CBAJ_P0020630 Agfg1 protein_coding protein_coding MGP_CBAJ_T0020631.1 MGP_CBAJ_G0015962.1 mouse_genomes_project 1 89784506 89848360 + MGP_CBAJ_P0020631 Agfg1 protein_coding protein_coding MGP_CBAJ_T0020632.1 MGP_CBAJ_G0015962.1 mouse_genomes_project 1 89784509 89847602 + MGP_CBAJ_P0020632 Agfg1 protein_coding protein_coding MGP_CBAJ_T0020633.1 MGP_CBAJ_G0015962.1 mouse_genomes_project 1 89784509 89847756 + MGP_CBAJ_P0020633 Agfg1 protein_coding protein_coding MGP_CBAJ_T0020634.1 MGP_CBAJ_G0015962.1 mouse_genomes_project 1 89784569 89847203 + MGP_CBAJ_P0020634 Agfg1 protein_coding protein_coding MGP_CBAJ_T0020635.1 MGP_CBAJ_G0015962.1 mouse_genomes_project 1 89784908 89830551 + MGP_CBAJ_P0020635 Agfg1 protein_coding protein_coding MGP_CBAJ_T0002735.1 MGP_CBAJ_G0002598.1 mouse_genomes_project 1 56402592 56404175 + Gm28777 antisense antisense MGP_CBAJ_T0005834.1 MGP_CBAJ_G0004886.1 mouse_genomes_project 1 151966033 151969651 - Gm26979 lincRNA lincRNA MGP_CBAJ_T0098508.1 MGP_CBAJ_G0036763.1 mouse_genomes_project 1 1751722 1751829 + Gm22307 snRNA snRNA MGP_CBAJ_T0021771.1 MGP_CBAJ_G0016216.1 mouse_genomes_project 1 145851000 145869462 - MGP_CBAJ_P0021771 Cntn2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021772.1 MGP_CBAJ_G0016216.1 mouse_genomes_project 1 145851000 145857208 - MGP_CBAJ_P0021772 Cntn2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021773.1 MGP_CBAJ_G0016216.1 mouse_genomes_project 1 145853345 145893352 - Cntn2 protein_coding retained_intron MGP_CBAJ_T0021774.1 MGP_CBAJ_G0016216.1 mouse_genomes_project 1 145853349 145893401 - MGP_CBAJ_P0021774 Cntn2 protein_coding protein_coding MGP_CBAJ_T0021775.1 MGP_CBAJ_G0016216.1 mouse_genomes_project 1 145853359 145893327 - Cntn2 protein_coding retained_intron MGP_CBAJ_T0021776.1 MGP_CBAJ_G0016216.1 mouse_genomes_project 1 145858571 145864746 - Cntn2 protein_coding retained_intron MGP_CBAJ_T0021777.1 MGP_CBAJ_G0016216.1 mouse_genomes_project 1 145879542 145884439 - MGP_CBAJ_P0021777 Cntn2 protein_coding protein_coding MGP_CBAJ_T0021778.1 MGP_CBAJ_G0016216.1 mouse_genomes_project 1 145884211 145893718 - MGP_CBAJ_P0021778 Cntn2 protein_coding protein_coding MGP_CBAJ_T0005940.1 MGP_CBAJ_G0004967.1 mouse_genomes_project 1 204499433 204505358 - Gm37712 lincRNA lincRNA MGP_CBAJ_T0002747.1 MGP_CBAJ_G0002607.1 mouse_genomes_project 1 63784025 63786444 - 1700122D07Rik antisense antisense MGP_CBAJ_T0000770.1 MGP_CBAJ_G0000707.1 mouse_genomes_project 1 215899571 215903135 + TEC TEC MGP_CBAJ_T0099763.1 MGP_CBAJ_G0038018.1 mouse_genomes_project 1 63973067 63973151 + Snord11 snoRNA snoRNA MGP_CBAJ_T0019870.1 MGP_CBAJ_G0015820.1 mouse_genomes_project 1 64901809 64990526 - MGP_CBAJ_P0019870 Raph1 protein_coding protein_coding MGP_CBAJ_T0019871.1 MGP_CBAJ_G0015820.1 mouse_genomes_project 1 64902701 64921133 - MGP_CBAJ_P0019871 Raph1 protein_coding protein_coding MGP_CBAJ_T0019872.1 MGP_CBAJ_G0015820.1 mouse_genomes_project 1 64902752 64990512 - MGP_CBAJ_P0019872 Raph1 protein_coding protein_coding MGP_CBAJ_T0019873.1 MGP_CBAJ_G0015820.1 mouse_genomes_project 1 64912258 64990516 - MGP_CBAJ_P0019873 Raph1 protein_coding protein_coding MGP_CBAJ_T0019874.1 MGP_CBAJ_G0015820.1 mouse_genomes_project 1 64914905 64917864 - Raph1 protein_coding retained_intron MGP_CBAJ_T0019875.1 MGP_CBAJ_G0015820.1 mouse_genomes_project 1 64923185 64924848 - Raph1 protein_coding retained_intron MGP_CBAJ_T0019876.1 MGP_CBAJ_G0015820.1 mouse_genomes_project 1 64935391 64943835 - Raph1 protein_coding retained_intron MGP_CBAJ_T0019877.1 MGP_CBAJ_G0015820.1 mouse_genomes_project 1 64947248 64990851 - MGP_CBAJ_P0019877 Raph1 protein_coding protein_coding MGP_CBAJ_T0000512.1 MGP_CBAJ_G0000454.1 mouse_genomes_project 1 93504800 93507479 + TEC TEC MGP_CBAJ_T0012042.1 MGP_CBAJ_G0010154.1 mouse_genomes_project 1 117086648 117090430 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023617.1 MGP_CBAJ_G0016616.1 mouse_genomes_project 1 200680778 200701414 - MGP_CBAJ_P0023617 Ephx1 protein_coding protein_coding MGP_CBAJ_T0023618.1 MGP_CBAJ_G0016616.1 mouse_genomes_project 1 200694840 200725687 - MGP_CBAJ_P0023618 Ephx1 protein_coding protein_coding MGP_CBAJ_T0023619.1 MGP_CBAJ_G0016616.1 mouse_genomes_project 1 200694840 200725687 - MGP_CBAJ_P0023619 Ephx1 protein_coding protein_coding MGP_CBAJ_T0023620.1 MGP_CBAJ_G0016616.1 mouse_genomes_project 1 200701392 200728941 - MGP_CBAJ_P0023620 Ephx1 protein_coding protein_coding MGP_CBAJ_T0022769.1 MGP_CBAJ_G0016406.1 mouse_genomes_project 1 180036010 180079235 - MGP_CBAJ_P0022769 Fmo1 protein_coding protein_coding MGP_CBAJ_T0022770.1 MGP_CBAJ_G0016406.1 mouse_genomes_project 1 180036216 180036923 - Fmo1 protein_coding processed_transcript MGP_CBAJ_T0022771.1 MGP_CBAJ_G0016406.1 mouse_genomes_project 1 180036499 180041126 - Fmo1 protein_coding processed_transcript MGP_CBAJ_T0022772.1 MGP_CBAJ_G0016406.1 mouse_genomes_project 1 180038021 180041126 - Fmo1 protein_coding retained_intron MGP_CBAJ_T0022773.1 MGP_CBAJ_G0016406.1 mouse_genomes_project 1 180040258 180066594 - MGP_CBAJ_P0022773 Fmo1 protein_coding protein_coding MGP_CBAJ_T0022774.1 MGP_CBAJ_G0016406.1 mouse_genomes_project 1 180042723 180066452 - MGP_CBAJ_P0022774 Fmo1 protein_coding protein_coding MGP_CBAJ_T0022775.1 MGP_CBAJ_G0016406.1 mouse_genomes_project 1 180042749 180066346 - MGP_CBAJ_P0022775 Fmo1 protein_coding protein_coding MGP_CBAJ_T0000674.1 MGP_CBAJ_G0000614.1 mouse_genomes_project 1 177088198 177090072 + TEC TEC MGP_CBAJ_T0000771.1 MGP_CBAJ_G0000708.1 mouse_genomes_project 1 215957852 215958384 + TEC TEC MGP_CBAJ_T0023326.1 MGP_CBAJ_G0016535.1 mouse_genomes_project 1 191305645 191306726 - MGP_CBAJ_P0023326 Apcs protein_coding protein_coding MGP_CBAJ_T0023374.1 MGP_CBAJ_G0016563.1 mouse_genomes_project 1 192989737 193069937 + MGP_CBAJ_P0023374 Spta1 protein_coding protein_coding MGP_CBAJ_T0023375.1 MGP_CBAJ_G0016563.1 mouse_genomes_project 1 193041353 193069045 + Spta1 protein_coding retained_intron MGP_CBAJ_T0018966.1 MGP_CBAJ_G0015653.1 mouse_genomes_project 1 35344652 35353287 + MGP_CBAJ_P0018966 protein_coding protein_coding MGP_CBAJ_T0018967.1 MGP_CBAJ_G0015653.1 mouse_genomes_project 1 35344663 35346375 + MGP_CBAJ_P0018967 protein_coding nonsense_mediated_decay MGP_CBAJ_T0002834.1 MGP_CBAJ_G0002671.1 mouse_genomes_project 1 150125831 150140831 + Gm26781 antisense antisense MGP_CBAJ_T0021164.1 MGP_CBAJ_G0016082.1 mouse_genomes_project 1 101838183 101912573 - MGP_CBAJ_P0021164 Hdlbp protein_coding protein_coding MGP_CBAJ_T0021165.1 MGP_CBAJ_G0016082.1 mouse_genomes_project 1 101840005 101878029 - MGP_CBAJ_P0021165 Hdlbp protein_coding protein_coding MGP_CBAJ_T0021166.1 MGP_CBAJ_G0016082.1 mouse_genomes_project 1 101840245 101873139 - MGP_CBAJ_P0021166 Hdlbp protein_coding protein_coding MGP_CBAJ_T0021167.1 MGP_CBAJ_G0016082.1 mouse_genomes_project 1 101860823 101877995 - Hdlbp protein_coding retained_intron MGP_CBAJ_T0021168.1 MGP_CBAJ_G0016082.1 mouse_genomes_project 1 101863273 101878025 - MGP_CBAJ_P0021168 Hdlbp protein_coding protein_coding MGP_CBAJ_T0021169.1 MGP_CBAJ_G0016082.1 mouse_genomes_project 1 101863690 101873308 - MGP_CBAJ_P0021169 Hdlbp protein_coding protein_coding MGP_CBAJ_T0021170.1 MGP_CBAJ_G0016082.1 mouse_genomes_project 1 101869466 101877775 - MGP_CBAJ_P0021170 Hdlbp protein_coding protein_coding MGP_CBAJ_T0021171.1 MGP_CBAJ_G0016082.1 mouse_genomes_project 1 101869502 101912587 - MGP_CBAJ_P0021171 Hdlbp protein_coding protein_coding MGP_CBAJ_T0021172.1 MGP_CBAJ_G0016082.1 mouse_genomes_project 1 101872644 101877992 - Hdlbp protein_coding retained_intron MGP_CBAJ_T0021173.1 MGP_CBAJ_G0016082.1 mouse_genomes_project 1 101873034 101912149 - MGP_CBAJ_P0021173 Hdlbp protein_coding protein_coding MGP_CBAJ_T0021174.1 MGP_CBAJ_G0016082.1 mouse_genomes_project 1 101908931 101912152 - Hdlbp protein_coding retained_intron MGP_CBAJ_T0000736.1 MGP_CBAJ_G0000675.1 mouse_genomes_project 1 201858246 201860471 - TEC TEC MGP_CBAJ_T0018698.1 MGP_CBAJ_G0015596.1 mouse_genomes_project 1 14457219 14474401 - MGP_CBAJ_P0018698 4930444P10Rik protein_coding protein_coding MGP_CBAJ_T0018699.1 MGP_CBAJ_G0015596.1 mouse_genomes_project 1 14457219 14487678 - MGP_CBAJ_P0018699 4930444P10Rik protein_coding protein_coding MGP_CBAJ_T0018700.1 MGP_CBAJ_G0015596.1 mouse_genomes_project 1 14457219 14487678 - MGP_CBAJ_P0018700 4930444P10Rik protein_coding protein_coding MGP_CBAJ_T0011813.1 MGP_CBAJ_G0009925.1 mouse_genomes_project 1 29677999 29680674 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000376.1 MGP_CBAJ_G0000319.1 mouse_genomes_project 1 24880229 24882762 - TEC TEC MGP_CBAJ_T0022096.1 MGP_CBAJ_G0016285.1 mouse_genomes_project 1 150519393 150524546 + MGP_CBAJ_P0022096 Zfp281 protein_coding protein_coding MGP_CBAJ_T0022097.1 MGP_CBAJ_G0016285.1 mouse_genomes_project 1 150519393 150524546 + MGP_CBAJ_P0022097 Zfp281 protein_coding protein_coding MGP_CBAJ_T0011814.1 MGP_CBAJ_G0009926.1 mouse_genomes_project 1 30185521 30186143 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021333.1 MGP_CBAJ_G0016117.1 mouse_genomes_project 1 117452839 117545984 - MGP_CBAJ_P0021333 protein_coding protein_coding MGP_CBAJ_T0020156.1 MGP_CBAJ_G0015879.1 mouse_genomes_project 1 78739376 78759799 - MGP_CBAJ_P0020156 Igfbp5 protein_coding protein_coding MGP_CBAJ_T0020157.1 MGP_CBAJ_G0015879.1 mouse_genomes_project 1 78739509 78759190 - Igfbp5 protein_coding processed_transcript MGP_CBAJ_T0009361.1 MGP_CBAJ_G0007499.1 mouse_genomes_project 1 37162963 37163025 - Mir6897 miRNA miRNA MGP_CBAJ_T0000550.1 MGP_CBAJ_G0000492.1 mouse_genomes_project 1 116776333 116778415 - TEC TEC MGP_CBAJ_T0000412.1 MGP_CBAJ_G0000354.1 mouse_genomes_project 1 38022737 38022880 - TEC TEC MGP_CBAJ_T0005667.1 MGP_CBAJ_G0004754.1 mouse_genomes_project 1 67451192 67462205 - Gm4208 lincRNA lincRNA MGP_CBAJ_T0023056.1 MGP_CBAJ_G0016477.1 mouse_genomes_project 1 189049116 189070314 - MGP_CBAJ_P0023056 Fcgr2b protein_coding protein_coding MGP_CBAJ_T0023057.1 MGP_CBAJ_G0016477.1 mouse_genomes_project 1 189053114 189070314 - MGP_CBAJ_P0023057 Fcgr2b protein_coding protein_coding MGP_CBAJ_T0023058.1 MGP_CBAJ_G0016477.1 mouse_genomes_project 1 189053290 189054187 - Fcgr2b protein_coding processed_transcript MGP_CBAJ_T0023059.1 MGP_CBAJ_G0016477.1 mouse_genomes_project 1 189053325 189070734 - MGP_CBAJ_P0023059 Fcgr2b protein_coding protein_coding MGP_CBAJ_T0023060.1 MGP_CBAJ_G0016477.1 mouse_genomes_project 1 189053549 189070314 - MGP_CBAJ_P0023060 Fcgr2b protein_coding protein_coding MGP_CBAJ_T0023061.1 MGP_CBAJ_G0016477.1 mouse_genomes_project 1 189056904 189070314 - Fcgr2b protein_coding retained_intron MGP_CBAJ_T0023062.1 MGP_CBAJ_G0016477.1 mouse_genomes_project 1 189061937 189070314 - Fcgr2b protein_coding retained_intron MGP_CBAJ_T0000559.1 MGP_CBAJ_G0000501.1 mouse_genomes_project 1 133330106 133333164 + TEC TEC MGP_CBAJ_T0099804.1 MGP_CBAJ_G0038059.1 mouse_genomes_project 1 169495391 169495531 + Gm25588 snoRNA snoRNA MGP_CBAJ_T0099747.1 MGP_CBAJ_G0038002.1 mouse_genomes_project 1 36064901 36065024 - Gm25096 snoRNA snoRNA MGP_CBAJ_T0021075.1 MGP_CBAJ_G0016059.1 mouse_genomes_project 1 100904082 100905945 + MGP_CBAJ_P0021075 Olfr1413 protein_coding protein_coding MGP_CBAJ_T0011980.1 MGP_CBAJ_G0010092.1 mouse_genomes_project 1 87704067 87704535 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100988.1 MGP_CBAJ_G0039243.1 mouse_genomes_project 1 35248849 35249678 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0100989.1 MGP_CBAJ_G0039243.1 mouse_genomes_project 1 35249562 35251374 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0012040.1 MGP_CBAJ_G0010152.1 mouse_genomes_project 1 116217163 116218111 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012115.1 MGP_CBAJ_G0010227.1 mouse_genomes_project 1 153080733 153081172 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005804.1 MGP_CBAJ_G0004859.1 mouse_genomes_project 1 133214322 133217585 + Gm29359 lincRNA lincRNA MGP_CBAJ_T0011965.1 MGP_CBAJ_G0010077.1 mouse_genomes_project 1 77418387 77419471 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023591.1 MGP_CBAJ_G0016609.1 mouse_genomes_project 1 200383053 200414978 + MGP_CBAJ_P0023591 Acbd3 protein_coding protein_coding MGP_CBAJ_T0023592.1 MGP_CBAJ_G0016609.1 mouse_genomes_project 1 200386870 200391695 + Acbd3 protein_coding retained_intron MGP_CBAJ_T0000587.1 MGP_CBAJ_G0000529.1 mouse_genomes_project 1 142853133 142855348 + TEC TEC MGP_CBAJ_T0022354.1 MGP_CBAJ_G0016335.1 mouse_genomes_project 1 169135010 169201924 - MGP_CBAJ_P0022354 Lamc2 protein_coding protein_coding MGP_CBAJ_T0022355.1 MGP_CBAJ_G0016335.1 mouse_genomes_project 1 169135010 169201524 - MGP_CBAJ_P0022355 Lamc2 protein_coding protein_coding MGP_CBAJ_T0022356.1 MGP_CBAJ_G0016335.1 mouse_genomes_project 1 169136427 169139489 - Lamc2 protein_coding retained_intron MGP_CBAJ_T0022357.1 MGP_CBAJ_G0016335.1 mouse_genomes_project 1 169138352 169141257 - MGP_CBAJ_P0022357 Lamc2 protein_coding protein_coding MGP_CBAJ_T0022358.1 MGP_CBAJ_G0016335.1 mouse_genomes_project 1 169165056 169166943 - Lamc2 protein_coding retained_intron MGP_CBAJ_T0022359.1 MGP_CBAJ_G0016335.1 mouse_genomes_project 1 169172165 169201924 - Lamc2 protein_coding retained_intron MGP_CBAJ_T0018915.1 MGP_CBAJ_G0015647.1 mouse_genomes_project 1 34521041 34575522 - MGP_CBAJ_P0018915 Zfp451 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018916.1 MGP_CBAJ_G0015647.1 mouse_genomes_project 1 34521041 34575664 - MGP_CBAJ_P0018916 Zfp451 protein_coding protein_coding MGP_CBAJ_T0018917.1 MGP_CBAJ_G0015647.1 mouse_genomes_project 1 34537042 34564866 - MGP_CBAJ_P0018917 Zfp451 protein_coding protein_coding MGP_CBAJ_T0018918.1 MGP_CBAJ_G0015647.1 mouse_genomes_project 1 34538557 34543439 - MGP_CBAJ_P0018918 Zfp451 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018919.1 MGP_CBAJ_G0015647.1 mouse_genomes_project 1 34538690 34575563 - MGP_CBAJ_P0018919 Zfp451 protein_coding protein_coding MGP_CBAJ_T0018920.1 MGP_CBAJ_G0015647.1 mouse_genomes_project 1 34541679 34575348 - Zfp451 protein_coding processed_transcript MGP_CBAJ_T0018921.1 MGP_CBAJ_G0015647.1 mouse_genomes_project 1 34545943 34560242 - Zfp451 protein_coding processed_transcript MGP_CBAJ_T0018922.1 MGP_CBAJ_G0015647.1 mouse_genomes_project 1 34551611 34575707 - MGP_CBAJ_P0018922 Zfp451 protein_coding protein_coding MGP_CBAJ_T0018923.1 MGP_CBAJ_G0015647.1 mouse_genomes_project 1 34574663 34575732 - Zfp451 protein_coding retained_intron MGP_CBAJ_T0023643.1 MGP_CBAJ_G0016623.1 mouse_genomes_project 1 201585735 201601367 + protein_coding retained_intron MGP_CBAJ_T0023644.1 MGP_CBAJ_G0016623.1 mouse_genomes_project 1 201587783 201615507 + MGP_CBAJ_P0023644 protein_coding protein_coding MGP_CBAJ_T0019269.1 MGP_CBAJ_G0015711.1 mouse_genomes_project 1 42079969 42107424 + MGP_CBAJ_P0019269 Il18r1 protein_coding protein_coding MGP_CBAJ_T0019270.1 MGP_CBAJ_G0015711.1 mouse_genomes_project 1 42080093 42107426 + MGP_CBAJ_P0019270 Il18r1 protein_coding protein_coding MGP_CBAJ_T0019271.1 MGP_CBAJ_G0015711.1 mouse_genomes_project 1 42080387 42107424 + MGP_CBAJ_P0019271 Il18r1 protein_coding protein_coding MGP_CBAJ_T0019272.1 MGP_CBAJ_G0015711.1 mouse_genomes_project 1 42080423 42116697 + MGP_CBAJ_P0019272 Il18r1 protein_coding protein_coding MGP_CBAJ_T0019273.1 MGP_CBAJ_G0015711.1 mouse_genomes_project 1 42080423 42116698 + MGP_CBAJ_P0019273 Il18r1 protein_coding protein_coding MGP_CBAJ_T0019274.1 MGP_CBAJ_G0015711.1 mouse_genomes_project 1 42080423 42116677 + MGP_CBAJ_P0019274 Il18r1 protein_coding protein_coding MGP_CBAJ_T0101499.1 MGP_CBAJ_G0039531.1 mouse_genomes_project 1 192757361 192801613 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0018660.1 MGP_CBAJ_G0015586.1 mouse_genomes_project 1 11259386 11510987 - MGP_CBAJ_P0018660 Ncoa2 protein_coding protein_coding MGP_CBAJ_T0018661.1 MGP_CBAJ_G0015586.1 mouse_genomes_project 1 11259440 11512631 - MGP_CBAJ_P0018661 Ncoa2 protein_coding protein_coding MGP_CBAJ_T0018662.1 MGP_CBAJ_G0015586.1 mouse_genomes_project 1 11262759 11512631 - MGP_CBAJ_P0018662 Ncoa2 protein_coding protein_coding MGP_CBAJ_T0018663.1 MGP_CBAJ_G0015586.1 mouse_genomes_project 1 11265585 11266900 - Ncoa2 protein_coding processed_transcript MGP_CBAJ_T0018664.1 MGP_CBAJ_G0015586.1 mouse_genomes_project 1 11266869 11268779 - Ncoa2 protein_coding retained_intron MGP_CBAJ_T0018665.1 MGP_CBAJ_G0015586.1 mouse_genomes_project 1 11268700 11271277 - Ncoa2 protein_coding retained_intron MGP_CBAJ_T0018666.1 MGP_CBAJ_G0015586.1 mouse_genomes_project 1 11286607 11512631 - Ncoa2 protein_coding retained_intron MGP_CBAJ_T0018667.1 MGP_CBAJ_G0015586.1 mouse_genomes_project 1 11288034 11512577 - Ncoa2 protein_coding retained_intron MGP_CBAJ_T0018668.1 MGP_CBAJ_G0015586.1 mouse_genomes_project 1 11309036 11510977 - Ncoa2 protein_coding retained_intron MGP_CBAJ_T0018669.1 MGP_CBAJ_G0015586.1 mouse_genomes_project 1 11311369 11512577 - Ncoa2 protein_coding retained_intron MGP_CBAJ_T0018670.1 MGP_CBAJ_G0015586.1 mouse_genomes_project 1 11316868 11432427 - MGP_CBAJ_P0018670 Ncoa2 protein_coding protein_coding MGP_CBAJ_T0000324.1 MGP_CBAJ_G0000269.1 mouse_genomes_project 1 695410 698299 - TEC TEC MGP_CBAJ_T0097874.1 MGP_CBAJ_G0036147.1 mouse_genomes_project 1 98414113 98414220 + Gm27648 rRNA rRNA MGP_CBAJ_T0022365.1 MGP_CBAJ_G0016337.1 mouse_genomes_project 1 169478020 169510302 + MGP_CBAJ_P0022365 Shcbp1l protein_coding protein_coding MGP_CBAJ_T0022366.1 MGP_CBAJ_G0016337.1 mouse_genomes_project 1 169478030 169495250 + MGP_CBAJ_P0022366 Shcbp1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0022367.1 MGP_CBAJ_G0016337.1 mouse_genomes_project 1 169500675 169504306 + Shcbp1l protein_coding retained_intron MGP_CBAJ_T0023622.1 MGP_CBAJ_G0016618.1 mouse_genomes_project 1 200800697 200871653 - MGP_CBAJ_P0023622 Nvl protein_coding protein_coding MGP_CBAJ_T0023623.1 MGP_CBAJ_G0016618.1 mouse_genomes_project 1 200807227 200810151 - Nvl protein_coding processed_transcript MGP_CBAJ_T0023624.1 MGP_CBAJ_G0016618.1 mouse_genomes_project 1 200809643 200811946 - Nvl protein_coding retained_intron MGP_CBAJ_T0023625.1 MGP_CBAJ_G0016618.1 mouse_genomes_project 1 200812401 200823817 - Nvl protein_coding retained_intron MGP_CBAJ_T0023626.1 MGP_CBAJ_G0016618.1 mouse_genomes_project 1 200861098 200866123 - Nvl protein_coding retained_intron MGP_CBAJ_T0012213.1 MGP_CBAJ_G0010325.1 mouse_genomes_project 1 203429240 203429632 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000345.1 MGP_CBAJ_G0000290.1 mouse_genomes_project 1 9627947 9630092 + TEC TEC MGP_CBAJ_T0022084.1 MGP_CBAJ_G0016283.1 mouse_genomes_project 1 150295529 150298051 + Ddx59 protein_coding retained_intron MGP_CBAJ_T0022085.1 MGP_CBAJ_G0016283.1 mouse_genomes_project 1 150295529 150320412 + MGP_CBAJ_P0022085 Ddx59 protein_coding protein_coding MGP_CBAJ_T0022086.1 MGP_CBAJ_G0016283.1 mouse_genomes_project 1 150310436 150312679 + Ddx59 protein_coding processed_transcript MGP_CBAJ_T0022087.1 MGP_CBAJ_G0016283.1 mouse_genomes_project 1 150312655 150314320 + Ddx59 protein_coding retained_intron MGP_CBAJ_T0023318.1 MGP_CBAJ_G0016531.1 mouse_genomes_project 1 190932517 190945464 - MGP_CBAJ_P0023318 Slamf8 protein_coding protein_coding MGP_CBAJ_T0023319.1 MGP_CBAJ_G0016531.1 mouse_genomes_project 1 190943874 190945345 - Slamf8 protein_coding retained_intron MGP_CBAJ_T0012102.1 MGP_CBAJ_G0010214.1 mouse_genomes_project 1 145607491 145607848 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0018854.1 MGP_CBAJ_G0015634.1 mouse_genomes_project 1 24117895 24220349 + MGP_CBAJ_P0018854 Lmbrd1 protein_coding protein_coding MGP_CBAJ_T0018855.1 MGP_CBAJ_G0015634.1 mouse_genomes_project 1 24175185 24198503 + Lmbrd1 protein_coding retained_intron MGP_CBAJ_T0018856.1 MGP_CBAJ_G0015634.1 mouse_genomes_project 1 24198427 24216707 + MGP_CBAJ_P0018856 Lmbrd1 protein_coding protein_coding MGP_CBAJ_T0099778.1 MGP_CBAJ_G0038033.1 mouse_genomes_project 1 103754166 103754276 - Gm23181 snoRNA snoRNA MGP_CBAJ_T0022496.1 MGP_CBAJ_G0016362.1 mouse_genomes_project 1 172586586 172635998 - MGP_CBAJ_P0022496 Tdrd5 protein_coding protein_coding MGP_CBAJ_T0022497.1 MGP_CBAJ_G0016362.1 mouse_genomes_project 1 172586588 172635682 - MGP_CBAJ_P0022497 Tdrd5 protein_coding protein_coding MGP_CBAJ_T0022498.1 MGP_CBAJ_G0016362.1 mouse_genomes_project 1 172593541 172597309 - Tdrd5 protein_coding processed_transcript MGP_CBAJ_T0022499.1 MGP_CBAJ_G0016362.1 mouse_genomes_project 1 172600806 172608179 - Tdrd5 protein_coding retained_intron MGP_CBAJ_T0022500.1 MGP_CBAJ_G0016362.1 mouse_genomes_project 1 172627022 172635940 - MGP_CBAJ_P0022500 Tdrd5 protein_coding protein_coding MGP_CBAJ_T0021856.1 MGP_CBAJ_G0016233.1 mouse_genomes_project 1 147173708 147178715 - MGP_CBAJ_P0021856 protein_coding protein_coding MGP_CBAJ_T0009353.1 MGP_CBAJ_G0007491.1 mouse_genomes_project 1 22562327 22562398 + Mir30a miRNA miRNA MGP_CBAJ_T0099795.1 MGP_CBAJ_G0038050.1 mouse_genomes_project 1 146190369 146190490 - Gm22609 snoRNA snoRNA MGP_CBAJ_T0009380.1 MGP_CBAJ_G0007518.1 mouse_genomes_project 1 69234445 69234514 + Gm25748 miRNA miRNA MGP_CBAJ_T0021834.1 MGP_CBAJ_G0016229.1 mouse_genomes_project 1 146862728 146872303 - MGP_CBAJ_P0021834 Sox13 protein_coding protein_coding MGP_CBAJ_T0021835.1 MGP_CBAJ_G0016229.1 mouse_genomes_project 1 146863055 146864585 - Sox13 protein_coding retained_intron MGP_CBAJ_T0021836.1 MGP_CBAJ_G0016229.1 mouse_genomes_project 1 146863610 146865493 - Sox13 protein_coding retained_intron MGP_CBAJ_T0022521.1 MGP_CBAJ_G0016366.1 mouse_genomes_project 1 172944032 173029358 + MGP_CBAJ_P0022521 Abl2 protein_coding protein_coding MGP_CBAJ_T0022522.1 MGP_CBAJ_G0016366.1 mouse_genomes_project 1 172944233 173058694 + MGP_CBAJ_P0022522 Abl2 protein_coding protein_coding MGP_CBAJ_T0022523.1 MGP_CBAJ_G0016366.1 mouse_genomes_project 1 172944295 173051839 + MGP_CBAJ_P0022523 Abl2 protein_coding protein_coding MGP_CBAJ_T0022524.1 MGP_CBAJ_G0016366.1 mouse_genomes_project 1 173016723 173036247 + MGP_CBAJ_P0022524 Abl2 protein_coding protein_coding MGP_CBAJ_T0000483.1 MGP_CBAJ_G0000425.1 mouse_genomes_project 1 80306873 80307299 - TEC TEC MGP_CBAJ_T0000628.1 MGP_CBAJ_G0000568.1 mouse_genomes_project 1 153254807 153258941 - TEC TEC MGP_CBAJ_T0019535.1 MGP_CBAJ_G0015761.1 mouse_genomes_project 1 56552042 56585969 - MGP_CBAJ_P0019535 Gm28551 protein_coding nonsense_mediated_decay MGP_CBAJ_T0005773.1 MGP_CBAJ_G0004837.1 mouse_genomes_project 1 116098326 116109277 - Gm7160 lincRNA lincRNA MGP_CBAJ_T0005774.1 MGP_CBAJ_G0004837.1 mouse_genomes_project 1 116108221 116109247 - Gm7160 lincRNA lincRNA MGP_CBAJ_T0101473.1 MGP_CBAJ_G0039505.1 mouse_genomes_project 1 111807056 111809378 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0098523.1 MGP_CBAJ_G0036778.1 mouse_genomes_project 1 34143163 34143269 + Gm23453 snRNA snRNA MGP_CBAJ_T0098589.1 MGP_CBAJ_G0036844.1 mouse_genomes_project 1 194752850 194753026 + Gm25560 snRNA snRNA MGP_CBAJ_T0011799.1 MGP_CBAJ_G0009911.1 mouse_genomes_project 1 23498743 23499610 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0022360.1 MGP_CBAJ_G0016336.1 mouse_genomes_project 1 169243145 169371625 - MGP_CBAJ_P0022360 Lamc1 protein_coding protein_coding MGP_CBAJ_T0022361.1 MGP_CBAJ_G0016336.1 mouse_genomes_project 1 169243145 169253367 - MGP_CBAJ_P0022361 Lamc1 protein_coding protein_coding MGP_CBAJ_T0022362.1 MGP_CBAJ_G0016336.1 mouse_genomes_project 1 169252983 169253641 - Lamc1 protein_coding retained_intron MGP_CBAJ_T0022363.1 MGP_CBAJ_G0016336.1 mouse_genomes_project 1 169253037 169265982 - MGP_CBAJ_P0022363 Lamc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022364.1 MGP_CBAJ_G0016336.1 mouse_genomes_project 1 169275277 169277122 - Lamc1 protein_coding retained_intron MGP_CBAJ_T0009373.1 MGP_CBAJ_G0007511.1 mouse_genomes_project 1 58321168 58321273 + Gm24053 miRNA miRNA MGP_CBAJ_T0000451.1 MGP_CBAJ_G0000393.1 mouse_genomes_project 1 64750302 64751359 + TEC TEC MGP_CBAJ_T0021537.1 MGP_CBAJ_G0016163.1 mouse_genomes_project 1 140452381 140492910 + MGP_CBAJ_P0021537 Acmsd protein_coding protein_coding MGP_CBAJ_T0021538.1 MGP_CBAJ_G0016163.1 mouse_genomes_project 1 140481699 140492910 + Acmsd protein_coding processed_transcript MGP_CBAJ_T0012212.1 MGP_CBAJ_G0010324.1 mouse_genomes_project 1 202349972 202350965 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012121.1 MGP_CBAJ_G0010233.1 mouse_genomes_project 1 157097642 157098257 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002881.1 MGP_CBAJ_G0002708.1 mouse_genomes_project 1 189714755 189718134 - B930036N10Rik antisense antisense MGP_CBAJ_T0002882.1 MGP_CBAJ_G0002708.1 mouse_genomes_project 1 189716827 189718134 - B930036N10Rik antisense antisense MGP_CBAJ_T0000701.1 MGP_CBAJ_G0000641.1 mouse_genomes_project 1 186156602 186158294 - TEC TEC MGP_CBAJ_T0101508.1 MGP_CBAJ_G0039540.1 mouse_genomes_project 1 197455262 197456234 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099811.1 MGP_CBAJ_G0038066.1 mouse_genomes_project 1 178015502 178015585 + Gm22357 snoRNA snoRNA MGP_CBAJ_T0011115.1 MGP_CBAJ_G0009253.1 mouse_genomes_project 1 29455587 29455699 - Gm25586 misc_RNA misc_RNA MGP_CBAJ_T0005748.1 MGP_CBAJ_G0004815.1 mouse_genomes_project 1 99125192 99125994 - Gm28199 lincRNA lincRNA MGP_CBAJ_T0005835.1 MGP_CBAJ_G0004887.1 mouse_genomes_project 1 151981865 152029096 - Gm26936 lincRNA lincRNA MGP_CBAJ_T0005836.1 MGP_CBAJ_G0004887.1 mouse_genomes_project 1 152020546 152029071 - Gm26936 lincRNA lincRNA MGP_CBAJ_T0002734.1 MGP_CBAJ_G0002597.1 mouse_genomes_project 1 54262494 54388630 - 9330175M20Rik antisense antisense MGP_CBAJ_T0021161.1 MGP_CBAJ_G0016081.1 mouse_genomes_project 1 101804396 101836547 + MGP_CBAJ_P0021161 Ano7 protein_coding protein_coding MGP_CBAJ_T0021162.1 MGP_CBAJ_G0016081.1 mouse_genomes_project 1 101804396 101835643 + MGP_CBAJ_P0021162 Ano7 protein_coding protein_coding MGP_CBAJ_T0021163.1 MGP_CBAJ_G0016081.1 mouse_genomes_project 1 101834100 101835813 + MGP_CBAJ_P0021163 Ano7 protein_coding protein_coding MGP_CBAJ_T0000339.1 MGP_CBAJ_G0000284.1 mouse_genomes_project 1 7728004 7729374 + TEC TEC MGP_CBAJ_T0020654.1 MGP_CBAJ_G0015968.1 mouse_genomes_project 1 91159316 91426021 - MGP_CBAJ_P0020654 Pid1 protein_coding protein_coding MGP_CBAJ_T0020655.1 MGP_CBAJ_G0015968.1 mouse_genomes_project 1 91160251 91499302 - MGP_CBAJ_P0020655 Pid1 protein_coding protein_coding MGP_CBAJ_T0020656.1 MGP_CBAJ_G0015968.1 mouse_genomes_project 1 91160946 91177125 - Pid1 protein_coding processed_transcript MGP_CBAJ_T0020657.1 MGP_CBAJ_G0015968.1 mouse_genomes_project 1 91205008 91425799 - MGP_CBAJ_P0020657 Pid1 protein_coding protein_coding MGP_CBAJ_T0020658.1 MGP_CBAJ_G0015968.1 mouse_genomes_project 1 91238810 91521797 - MGP_CBAJ_P0020658 Pid1 protein_coding protein_coding MGP_CBAJ_T0020659.1 MGP_CBAJ_G0015968.1 mouse_genomes_project 1 91246359 91504197 - MGP_CBAJ_P0020659 Pid1 protein_coding protein_coding MGP_CBAJ_T0020660.1 MGP_CBAJ_G0015968.1 mouse_genomes_project 1 91290194 91425987 - MGP_CBAJ_P0020660 Pid1 protein_coding protein_coding MGP_CBAJ_T0020661.1 MGP_CBAJ_G0015968.1 mouse_genomes_project 1 91424568 91425999 - Pid1 protein_coding retained_intron MGP_CBAJ_T0020945.1 MGP_CBAJ_G0016035.1 mouse_genomes_project 1 98102354 98221660 - MGP_CBAJ_P0020945 Iqca protein_coding protein_coding MGP_CBAJ_T0020946.1 MGP_CBAJ_G0016035.1 mouse_genomes_project 1 98102357 98155927 - Iqca protein_coding processed_transcript MGP_CBAJ_T0020947.1 MGP_CBAJ_G0016035.1 mouse_genomes_project 1 98102848 98221434 - MGP_CBAJ_P0020947 Iqca protein_coding unknown_likely_coding MGP_CBAJ_T0020948.1 MGP_CBAJ_G0016035.1 mouse_genomes_project 1 98119608 98132912 - MGP_CBAJ_P0020948 Iqca protein_coding protein_coding MGP_CBAJ_T0020949.1 MGP_CBAJ_G0016035.1 mouse_genomes_project 1 98148118 98155927 - Iqca protein_coding processed_transcript MGP_CBAJ_T0020950.1 MGP_CBAJ_G0016035.1 mouse_genomes_project 1 98195085 98221660 - Iqca protein_coding processed_transcript MGP_CBAJ_T0005593.1 MGP_CBAJ_G0004703.1 mouse_genomes_project 1 36859425 36861066 + 1110002O04Rik lincRNA lincRNA MGP_CBAJ_T0000766.1 MGP_CBAJ_G0000703.1 mouse_genomes_project 1 214472296 214472924 + TEC TEC MGP_CBAJ_T0005693.1 MGP_CBAJ_G0004772.1 mouse_genomes_project 1 77872897 77887593 - Gm4319 lincRNA lincRNA MGP_CBAJ_T0097742.1 MGP_CBAJ_G0036015.1 mouse_genomes_project 1 35608436 35609385 + pseudogene pseudogene MGP_CBAJ_T0020597.1 MGP_CBAJ_G0015954.1 mouse_genomes_project 1 87835299 88073652 + MGP_CBAJ_P0020597 Nyap2 protein_coding protein_coding MGP_CBAJ_T0020598.1 MGP_CBAJ_G0015954.1 mouse_genomes_project 1 87835544 88073627 + MGP_CBAJ_P0020598 Nyap2 protein_coding protein_coding MGP_CBAJ_T0020599.1 MGP_CBAJ_G0015954.1 mouse_genomes_project 1 87835646 88043555 + MGP_CBAJ_P0020599 Nyap2 protein_coding protein_coding MGP_CBAJ_T0020600.1 MGP_CBAJ_G0015954.1 mouse_genomes_project 1 87835653 88074814 + MGP_CBAJ_P0020600 Nyap2 protein_coding protein_coding MGP_CBAJ_T0020601.1 MGP_CBAJ_G0015954.1 mouse_genomes_project 1 87835912 88138457 + MGP_CBAJ_P0020601 Nyap2 protein_coding protein_coding MGP_CBAJ_T0000546.1 MGP_CBAJ_G0000488.1 mouse_genomes_project 1 115769705 115774060 + TEC TEC MGP_CBAJ_T0011909.1 MGP_CBAJ_G0010021.1 mouse_genomes_project 1 59023818 59024166 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005632.1 MGP_CBAJ_G0004726.1 mouse_genomes_project 1 49715048 49753733 + Gm28826 lincRNA lincRNA MGP_CBAJ_T0099826.1 MGP_CBAJ_G0038081.1 mouse_genomes_project 1 207089794 207089929 + Gm26169 snoRNA snoRNA MGP_CBAJ_T0101454.1 MGP_CBAJ_G0039486.1 mouse_genomes_project 1 75604402 75604490 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0018626.1 MGP_CBAJ_G0015581.1 mouse_genomes_project 1 8858668 9194961 + MGP_CBAJ_P0018626 Prex2 protein_coding protein_coding MGP_CBAJ_T0018627.1 MGP_CBAJ_G0015581.1 mouse_genomes_project 1 8858721 8861786 + Prex2 protein_coding retained_intron MGP_CBAJ_T0018628.1 MGP_CBAJ_G0015581.1 mouse_genomes_project 1 8973248 9029088 + Prex2 protein_coding retained_intron MGP_CBAJ_T0018629.1 MGP_CBAJ_G0015581.1 mouse_genomes_project 1 9019723 9039593 + Prex2 protein_coding retained_intron MGP_CBAJ_T0018632.1 MGP_CBAJ_G0015581.1 mouse_genomes_project 1 9146448 9187531 + MGP_CBAJ_P0018632 Prex2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018633.1 MGP_CBAJ_G0015581.1 mouse_genomes_project 1 9168353 9187730 + MGP_CBAJ_P0018633 Prex2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023174.1 MGP_CBAJ_G0016498.1 mouse_genomes_project 1 189566364 189586638 + MGP_CBAJ_P0023174 Nectin4 protein_coding protein_coding MGP_CBAJ_T0023175.1 MGP_CBAJ_G0016498.1 mouse_genomes_project 1 189566617 189586949 + MGP_CBAJ_P0023175 Nectin4 protein_coding protein_coding MGP_CBAJ_T0023176.1 MGP_CBAJ_G0016498.1 mouse_genomes_project 1 189566620 189586636 + MGP_CBAJ_P0023176 Nectin4 protein_coding protein_coding MGP_CBAJ_T0000384.1 MGP_CBAJ_G0000327.1 mouse_genomes_project 1 25312420 25316001 - TEC TEC MGP_CBAJ_T0011895.1 MGP_CBAJ_G0010007.1 mouse_genomes_project 1 55415290 55416689 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005784.1 MGP_CBAJ_G0004845.1 mouse_genomes_project 1 124956934 125034784 - 9330185C12Rik lincRNA lincRNA MGP_CBAJ_T0000710.1 MGP_CBAJ_G0000650.1 mouse_genomes_project 1 194900168 194902128 - TEC TEC MGP_CBAJ_T0099769.1 MGP_CBAJ_G0038024.1 mouse_genomes_project 1 71977039 71977169 + Gm25832 snoRNA snoRNA MGP_CBAJ_T0021020.1 MGP_CBAJ_G0016048.1 mouse_genomes_project 1 99538141 99551782 + MGP_CBAJ_P0021020 Klhl30 protein_coding protein_coding MGP_CBAJ_T0018474.1 MGP_CBAJ_G0015559.1 mouse_genomes_project 1 2122114 2168627 + MGP_CBAJ_P0018474 Tcea1 protein_coding protein_coding MGP_CBAJ_T0018475.1 MGP_CBAJ_G0015559.1 mouse_genomes_project 1 2122338 2168631 + MGP_CBAJ_P0018475 Tcea1 protein_coding protein_coding MGP_CBAJ_T0018644.1 MGP_CBAJ_G0015583.1 mouse_genomes_project 1 10733803 10917386 + MGP_CBAJ_P0018644 Sulf1 protein_coding protein_coding MGP_CBAJ_T0018645.1 MGP_CBAJ_G0015583.1 mouse_genomes_project 1 10733849 10916565 + MGP_CBAJ_P0018645 Sulf1 protein_coding protein_coding MGP_CBAJ_T0018646.1 MGP_CBAJ_G0015583.1 mouse_genomes_project 1 10734058 10908728 + MGP_CBAJ_P0018646 Sulf1 protein_coding protein_coding MGP_CBAJ_T0018647.1 MGP_CBAJ_G0015583.1 mouse_genomes_project 1 10761446 10878234 + Sulf1 protein_coding retained_intron MGP_CBAJ_T0018648.1 MGP_CBAJ_G0015583.1 mouse_genomes_project 1 10761516 10916571 + MGP_CBAJ_P0018648 Sulf1 protein_coding protein_coding MGP_CBAJ_T0018649.1 MGP_CBAJ_G0015583.1 mouse_genomes_project 1 10762451 10835255 + MGP_CBAJ_P0018649 Sulf1 protein_coding protein_coding MGP_CBAJ_T0018650.1 MGP_CBAJ_G0015583.1 mouse_genomes_project 1 10771102 10835345 + MGP_CBAJ_P0018650 Sulf1 protein_coding protein_coding MGP_CBAJ_T0018651.1 MGP_CBAJ_G0015583.1 mouse_genomes_project 1 10834148 10837524 + Sulf1 protein_coding retained_intron MGP_CBAJ_T0018652.1 MGP_CBAJ_G0015583.1 mouse_genomes_project 1 10892498 10896960 + Sulf1 protein_coding retained_intron MGP_CBAJ_T0018653.1 MGP_CBAJ_G0015583.1 mouse_genomes_project 1 10899138 10917386 + MGP_CBAJ_P0018653 Sulf1 protein_coding protein_coding MGP_CBAJ_T0020307.1 MGP_CBAJ_G0015907.1 mouse_genomes_project 1 80992797 80996708 - MGP_CBAJ_P0020307 Fev protein_coding protein_coding MGP_CBAJ_T0020308.1 MGP_CBAJ_G0015907.1 mouse_genomes_project 1 80993294 80996611 - MGP_CBAJ_P0020308 Fev protein_coding protein_coding MGP_CBAJ_T0020309.1 MGP_CBAJ_G0015907.1 mouse_genomes_project 1 80993695 80995896 - Fev protein_coding retained_intron MGP_CBAJ_T0012090.1 MGP_CBAJ_G0010202.1 mouse_genomes_project 1 136058826 136060019 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021315.1 MGP_CBAJ_G0016112.1 mouse_genomes_project 1 116910306 116951280 - MGP_CBAJ_P0021315 Kdsr protein_coding protein_coding MGP_CBAJ_T0021316.1 MGP_CBAJ_G0016112.1 mouse_genomes_project 1 116936641 116951252 - Kdsr protein_coding retained_intron MGP_CBAJ_T0021317.1 MGP_CBAJ_G0016112.1 mouse_genomes_project 1 116948654 116951236 - Kdsr protein_coding retained_intron MGP_CBAJ_T0005885.1 MGP_CBAJ_G0004926.1 mouse_genomes_project 1 182107851 182134959 + Gm37184 lincRNA lincRNA MGP_CBAJ_T0018990.1 MGP_CBAJ_G0015660.1 mouse_genomes_project 1 37068669 37112237 + MGP_CBAJ_P0018990 Hs6st1 protein_coding protein_coding MGP_CBAJ_T0018991.1 MGP_CBAJ_G0015660.1 mouse_genomes_project 1 37107481 37110771 + Hs6st1 protein_coding retained_intron MGP_CBAJ_T0005749.1 MGP_CBAJ_G0004816.1 mouse_genomes_project 1 99481657 99488851 - Gm26683 lincRNA lincRNA MGP_CBAJ_T0012178.1 MGP_CBAJ_G0010290.1 mouse_genomes_project 1 183113007 183113839 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000730.1 MGP_CBAJ_G0000669.1 mouse_genomes_project 1 199984175 199985045 + TEC TEC MGP_CBAJ_T0011122.1 MGP_CBAJ_G0009260.1 mouse_genomes_project 1 67856229 67856405 + Gm27390 misc_RNA misc_RNA MGP_CBAJ_T0021647.1 MGP_CBAJ_G0016189.1 mouse_genomes_project 1 144267618 144313848 - MGP_CBAJ_P0021647 Mapkapk2 protein_coding protein_coding MGP_CBAJ_T0021648.1 MGP_CBAJ_G0016189.1 mouse_genomes_project 1 144270807 144288629 - MGP_CBAJ_P0021648 Mapkapk2 protein_coding protein_coding MGP_CBAJ_T0011958.1 MGP_CBAJ_G0010070.1 mouse_genomes_project 1 73581806 73582253 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011966.1 MGP_CBAJ_G0010078.1 mouse_genomes_project 1 77763158 77763638 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000488.1 MGP_CBAJ_G0000430.1 mouse_genomes_project 1 83443990 83447744 - TEC TEC MGP_CBAJ_T0005729.1 MGP_CBAJ_G0004797.1 mouse_genomes_project 1 93112377 93121830 + 9930111H07Rik lincRNA lincRNA MGP_CBAJ_T0099799.1 MGP_CBAJ_G0038054.1 mouse_genomes_project 1 151762961 151763077 + Gm22727 snoRNA snoRNA MGP_CBAJ_T0021605.1 MGP_CBAJ_G0016176.1 mouse_genomes_project 1 143729729 143789249 - MGP_CBAJ_P0021605 Zp3r protein_coding protein_coding MGP_CBAJ_T0021606.1 MGP_CBAJ_G0016176.1 mouse_genomes_project 1 143729729 143789249 - MGP_CBAJ_P0021606 Zp3r protein_coding protein_coding MGP_CBAJ_T0021607.1 MGP_CBAJ_G0016176.1 mouse_genomes_project 1 143729732 143789240 - MGP_CBAJ_P0021607 Zp3r protein_coding protein_coding MGP_CBAJ_T0098556.1 MGP_CBAJ_G0036811.1 mouse_genomes_project 1 128991460 128991624 + Gm24030 snRNA snRNA MGP_CBAJ_T0099780.1 MGP_CBAJ_G0038035.1 mouse_genomes_project 1 109663830 109663962 - Gm23602 snoRNA snoRNA MGP_CBAJ_T0098506.1 MGP_CBAJ_G0036761.1 mouse_genomes_project 1 171865 171975 + Gm26206 snRNA snRNA MGP_CBAJ_T0002756.1 MGP_CBAJ_G0002614.1 mouse_genomes_project 1 74972737 75006468 + Gm29114 antisense antisense MGP_CBAJ_T0002738.1 MGP_CBAJ_G0002600.1 mouse_genomes_project 1 58855333 58870337 + Gm10561 antisense antisense MGP_CBAJ_T0020785.1 MGP_CBAJ_G0015996.1 mouse_genomes_project 1 94627859 94631077 - MGP_CBAJ_P0020785 Alppl2 protein_coding protein_coding MGP_CBAJ_T0020786.1 MGP_CBAJ_G0015996.1 mouse_genomes_project 1 94627860 94631094 - MGP_CBAJ_P0020786 Alppl2 protein_coding protein_coding MGP_CBAJ_T0020787.1 MGP_CBAJ_G0015996.1 mouse_genomes_project 1 94629945 94630971 - Alppl2 protein_coding retained_intron MGP_CBAJ_T0022783.1 MGP_CBAJ_G0016408.1 mouse_genomes_project 1 180141719 180164521 - MGP_CBAJ_P0022783 Fmo6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022784.1 MGP_CBAJ_G0016408.1 mouse_genomes_project 1 180141891 180164224 - MGP_CBAJ_P0022784 Fmo6 protein_coding protein_coding MGP_CBAJ_T0022022.1 MGP_CBAJ_G0016271.1 mouse_genomes_project 1 149634583 149649106 + MGP_CBAJ_P0022022 Lad1 protein_coding protein_coding MGP_CBAJ_T0022023.1 MGP_CBAJ_G0016271.1 mouse_genomes_project 1 149645758 149648471 + Lad1 protein_coding processed_transcript MGP_CBAJ_T0022024.1 MGP_CBAJ_G0016271.1 mouse_genomes_project 1 149646297 149648226 + Lad1 protein_coding processed_transcript MGP_CBAJ_T0002703.1 MGP_CBAJ_G0002572.1 mouse_genomes_project 1 31541246 31555315 + Gm29128 antisense antisense MGP_CBAJ_T0018482.1 MGP_CBAJ_G0015561.1 mouse_genomes_project 1 2389249 2482308 + MGP_CBAJ_P0018482 Atp6v1h protein_coding protein_coding MGP_CBAJ_T0018483.1 MGP_CBAJ_G0015561.1 mouse_genomes_project 1 2401591 2482497 + MGP_CBAJ_P0018483 Atp6v1h protein_coding protein_coding MGP_CBAJ_T0018484.1 MGP_CBAJ_G0015561.1 mouse_genomes_project 1 2401621 2414270 + MGP_CBAJ_P0018484 Atp6v1h protein_coding protein_coding MGP_CBAJ_T0018485.1 MGP_CBAJ_G0015561.1 mouse_genomes_project 1 2401635 2464996 + Atp6v1h protein_coding retained_intron MGP_CBAJ_T0018486.1 MGP_CBAJ_G0015561.1 mouse_genomes_project 1 2401643 2405299 + Atp6v1h protein_coding retained_intron MGP_CBAJ_T0018487.1 MGP_CBAJ_G0015561.1 mouse_genomes_project 1 2401643 2414201 + MGP_CBAJ_P0018487 Atp6v1h protein_coding protein_coding MGP_CBAJ_T0018488.1 MGP_CBAJ_G0015561.1 mouse_genomes_project 1 2401665 2482387 + MGP_CBAJ_P0018488 Atp6v1h protein_coding protein_coding MGP_CBAJ_T0018489.1 MGP_CBAJ_G0015561.1 mouse_genomes_project 1 2401675 2418322 + Atp6v1h protein_coding retained_intron MGP_CBAJ_T0101504.1 MGP_CBAJ_G0039536.1 mouse_genomes_project 1 193262400 193263505 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0019415.1 MGP_CBAJ_G0015742.1 mouse_genomes_project 1 49343262 49395779 - MGP_CBAJ_P0019415 Slc39a10 protein_coding protein_coding MGP_CBAJ_T0019416.1 MGP_CBAJ_G0015742.1 mouse_genomes_project 1 49353622 49371861 - Slc39a10 protein_coding retained_intron MGP_CBAJ_T0019417.1 MGP_CBAJ_G0015742.1 mouse_genomes_project 1 49371601 49439376 - MGP_CBAJ_P0019417 Slc39a10 protein_coding protein_coding MGP_CBAJ_T0019418.1 MGP_CBAJ_G0015742.1 mouse_genomes_project 1 49371699 49432807 - MGP_CBAJ_P0019418 Slc39a10 protein_coding protein_coding MGP_CBAJ_T0009394.1 MGP_CBAJ_G0007532.1 mouse_genomes_project 1 93087477 93087604 + Mir8096 miRNA miRNA MGP_CBAJ_T0005633.1 MGP_CBAJ_G0004727.1 mouse_genomes_project 1 52028792 52121215 + C230029F24Rik lincRNA lincRNA MGP_CBAJ_T0005634.1 MGP_CBAJ_G0004727.1 mouse_genomes_project 1 52028792 52114270 + C230029F24Rik lincRNA lincRNA MGP_CBAJ_T0005934.1 MGP_CBAJ_G0004965.1 mouse_genomes_project 1 204012124 204012950 + Gm38108 lincRNA lincRNA MGP_CBAJ_T0002809.1 MGP_CBAJ_G0002652.1 mouse_genomes_project 1 143540034 143556307 + Gm15674 antisense antisense MGP_CBAJ_T0002931.1 MGP_CBAJ_G0002747.1 mouse_genomes_project 1 213145856 213163994 + Gm10516 antisense antisense MGP_CBAJ_T0002932.1 MGP_CBAJ_G0002747.1 mouse_genomes_project 1 213146305 213158390 + Gm10516 antisense antisense MGP_CBAJ_T0011117.1 MGP_CBAJ_G0009255.1 mouse_genomes_project 1 39275828 39276065 + Gm23409 misc_RNA misc_RNA MGP_CBAJ_T0020846.1 MGP_CBAJ_G0016009.1 mouse_genomes_project 1 95108113 95207725 + MGP_CBAJ_P0020846 Neu2 protein_coding protein_coding MGP_CBAJ_T0020847.1 MGP_CBAJ_G0016009.1 mouse_genomes_project 1 95183491 95208893 + MGP_CBAJ_P0020847 Neu2 protein_coding protein_coding MGP_CBAJ_T0020848.1 MGP_CBAJ_G0016009.1 mouse_genomes_project 1 95183491 95208876 + MGP_CBAJ_P0020848 Neu2 protein_coding protein_coding MGP_CBAJ_T0020849.1 MGP_CBAJ_G0016009.1 mouse_genomes_project 1 95183510 95207620 + MGP_CBAJ_P0020849 Neu2 protein_coding protein_coding MGP_CBAJ_T0020850.1 MGP_CBAJ_G0016009.1 mouse_genomes_project 1 95195311 95208900 + MGP_CBAJ_P0020850 Neu2 protein_coding protein_coding MGP_CBAJ_T0020851.1 MGP_CBAJ_G0016009.1 mouse_genomes_project 1 95205604 95208876 + MGP_CBAJ_P0020851 Neu2 protein_coding protein_coding MGP_CBAJ_T0020852.1 MGP_CBAJ_G0016009.1 mouse_genomes_project 1 95205604 95208882 + MGP_CBAJ_P0020852 Neu2 protein_coding protein_coding MGP_CBAJ_T0023271.1 MGP_CBAJ_G0016520.1 mouse_genomes_project 1 190544348 190580114 - MGP_CBAJ_P0023271 Atp1a4 protein_coding protein_coding MGP_CBAJ_T0023272.1 MGP_CBAJ_G0016520.1 mouse_genomes_project 1 190568601 190575643 - Atp1a4 protein_coding processed_transcript MGP_CBAJ_T0005762.1 MGP_CBAJ_G0004828.1 mouse_genomes_project 1 104857631 104894710 - 1700063A18Rik lincRNA lincRNA MGP_CBAJ_T0011906.1 MGP_CBAJ_G0010018.1 mouse_genomes_project 1 58780507 58780819 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016732.1 MGP_CBAJ_G0014833.1 mouse_genomes_project 1 44657407 44663796 - Pantr2 processed_transcript lincRNA MGP_CBAJ_T0016733.1 MGP_CBAJ_G0014833.1 mouse_genomes_project 1 44657418 44658399 - Pantr2 processed_transcript TEC MGP_CBAJ_T0005959.1 MGP_CBAJ_G0004981.1 mouse_genomes_project 1 207929596 207944476 + Gm37896 lincRNA lincRNA MGP_CBAJ_T0011992.1 MGP_CBAJ_G0010104.1 mouse_genomes_project 1 91295005 91295551 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000518.1 MGP_CBAJ_G0000460.1 mouse_genomes_project 1 94382498 94384817 + TEC TEC MGP_CBAJ_T0011719.1 MGP_CBAJ_G0009831.1 mouse_genomes_project 1 1744081 1747915 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016750.1 MGP_CBAJ_G0014842.1 mouse_genomes_project 1 89622866 89660156 - C430014B12Rik processed_transcript antisense MGP_CBAJ_T0016751.1 MGP_CBAJ_G0014842.1 mouse_genomes_project 1 89655032 89660208 - C430014B12Rik processed_transcript antisense MGP_CBAJ_T0016752.1 MGP_CBAJ_G0014842.1 mouse_genomes_project 1 89656862 89660186 - C430014B12Rik processed_transcript retained_intron MGP_CBAJ_T0101490.1 MGP_CBAJ_G0039522.1 mouse_genomes_project 1 175974382 175976315 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0012034.1 MGP_CBAJ_G0010146.1 mouse_genomes_project 1 114439779 114440847 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002891.1 MGP_CBAJ_G0002717.1 mouse_genomes_project 1 196530161 196530908 - Gm26801 antisense antisense MGP_CBAJ_T0002892.1 MGP_CBAJ_G0002717.1 mouse_genomes_project 1 196530870 196554136 - Gm26801 antisense antisense MGP_CBAJ_T0018767.1 MGP_CBAJ_G0015611.1 mouse_genomes_project 1 17871785 17935017 + MGP_CBAJ_P0018767 Tfap2d protein_coding protein_coding MGP_CBAJ_T0018768.1 MGP_CBAJ_G0015611.1 mouse_genomes_project 1 17875904 17915064 + Tfap2d protein_coding processed_transcript MGP_CBAJ_T0005600.1 MGP_CBAJ_G0004709.1 mouse_genomes_project 1 37864407 37870046 - Gm33533 lincRNA lincRNA MGP_CBAJ_T0020021.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71198333 71435763 + MGP_CBAJ_P0020021 protein_coding protein_coding MGP_CBAJ_T0020022.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71198373 71505872 + MGP_CBAJ_P0020022 protein_coding protein_coding MGP_CBAJ_T0020023.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71198376 71506430 + MGP_CBAJ_P0020023 protein_coding protein_coding MGP_CBAJ_T0020024.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71198525 71368874 + protein_coding processed_transcript MGP_CBAJ_T0020025.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71198604 71225146 + protein_coding processed_transcript MGP_CBAJ_T0020026.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71297007 71506428 + MGP_CBAJ_P0020026 protein_coding protein_coding MGP_CBAJ_T0020027.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71297022 71506428 + MGP_CBAJ_P0020027 protein_coding protein_coding MGP_CBAJ_T0020028.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71368153 71503032 + MGP_CBAJ_P0020028 protein_coding protein_coding MGP_CBAJ_T0020029.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71368270 71464333 + protein_coding retained_intron MGP_CBAJ_T0020030.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71368432 71436437 + protein_coding retained_intron MGP_CBAJ_T0020031.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71368536 71461689 + MGP_CBAJ_P0020031 protein_coding protein_coding MGP_CBAJ_T0020032.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71419819 71506430 + MGP_CBAJ_P0020032 protein_coding protein_coding MGP_CBAJ_T0020033.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71419822 71506430 + MGP_CBAJ_P0020033 protein_coding protein_coding MGP_CBAJ_T0020034.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71435657 71473743 + MGP_CBAJ_P0020034 protein_coding protein_coding MGP_CBAJ_T0020035.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71435847 71473272 + MGP_CBAJ_P0020035 protein_coding protein_coding MGP_CBAJ_T0020036.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71442086 71503800 + protein_coding processed_transcript MGP_CBAJ_T0020037.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71442119 71474593 + MGP_CBAJ_P0020037 protein_coding protein_coding MGP_CBAJ_T0020038.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71442126 71468594 + protein_coding processed_transcript MGP_CBAJ_T0020039.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71442152 71461778 + protein_coding retained_intron MGP_CBAJ_T0020040.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71475602 71487018 + protein_coding processed_transcript MGP_CBAJ_T0020041.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71476452 71502148 + MGP_CBAJ_P0020041 protein_coding protein_coding MGP_CBAJ_T0020042.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71476452 71502148 + MGP_CBAJ_P0020042 protein_coding protein_coding MGP_CBAJ_T0020043.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71477143 71502125 + MGP_CBAJ_P0020043 protein_coding protein_coding MGP_CBAJ_T0020044.1 MGP_CBAJ_G0015854.1 mouse_genomes_project 1 71495068 71503297 + MGP_CBAJ_P0020044 protein_coding protein_coding MGP_CBAJ_T0022078.1 MGP_CBAJ_G0016282.1 mouse_genomes_project 1 150134547 150219700 - MGP_CBAJ_P0022078 Camsap2 protein_coding protein_coding MGP_CBAJ_T0022079.1 MGP_CBAJ_G0016282.1 mouse_genomes_project 1 150134676 150148165 - MGP_CBAJ_P0022079 Camsap2 protein_coding protein_coding MGP_CBAJ_T0022080.1 MGP_CBAJ_G0016282.1 mouse_genomes_project 1 150135584 150219294 - MGP_CBAJ_P0022080 Camsap2 protein_coding protein_coding MGP_CBAJ_T0022081.1 MGP_CBAJ_G0016282.1 mouse_genomes_project 1 150137030 150219294 - MGP_CBAJ_P0022081 Camsap2 protein_coding protein_coding MGP_CBAJ_T0022082.1 MGP_CBAJ_G0016282.1 mouse_genomes_project 1 150162770 150165663 - Camsap2 protein_coding processed_transcript MGP_CBAJ_T0022083.1 MGP_CBAJ_G0016282.1 mouse_genomes_project 1 150204642 150219686 - Camsap2 protein_coding processed_transcript MGP_CBAJ_T0012107.1 MGP_CBAJ_G0010219.1 mouse_genomes_project 1 150392604 150392976 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012131.1 MGP_CBAJ_G0010243.1 mouse_genomes_project 1 161512758 161513359 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0023371.1 MGP_CBAJ_G0016560.1 mouse_genomes_project 1 192920203 192921127 - MGP_CBAJ_P0023371 Olfr231 protein_coding protein_coding MGP_CBAJ_T0002800.1 MGP_CBAJ_G0002646.1 mouse_genomes_project 1 116714404 116731449 + D630008O14Rik antisense antisense MGP_CBAJ_T0002801.1 MGP_CBAJ_G0002646.1 mouse_genomes_project 1 116714404 116747422 + D630008O14Rik antisense antisense MGP_CBAJ_T0005754.1 MGP_CBAJ_G0004821.1 mouse_genomes_project 1 100614608 100619993 + Gm29099 lincRNA lincRNA MGP_CBAJ_T0101491.1 MGP_CBAJ_G0039523.1 mouse_genomes_project 1 178177726 178242172 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0005824.1 MGP_CBAJ_G0004879.1 mouse_genomes_project 1 150117556 150120736 - Gm37552 lincRNA lincRNA MGP_CBAJ_T0002935.1 MGP_CBAJ_G0002750.1 mouse_genomes_project 1 214291203 214314374 + 4930570N18Rik antisense antisense MGP_CBAJ_T0016798.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178013870 178016975 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0016799.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178014053 178017988 + Gas5 processed_transcript lincRNA MGP_CBAJ_T0016800.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178014375 178017984 + Gas5 processed_transcript lincRNA MGP_CBAJ_T0016801.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178014513 178017986 + Gas5 processed_transcript lincRNA MGP_CBAJ_T0016802.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178014609 178017986 + Gas5 processed_transcript lincRNA MGP_CBAJ_T0016803.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178014609 178017982 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0016804.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178014609 178016990 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0016805.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178014612 178017988 + Gas5 processed_transcript lincRNA MGP_CBAJ_T0016806.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178014612 178017983 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0016807.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178014612 178017988 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0016808.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178014612 178016499 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0016809.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178014613 178017692 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0016810.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178014614 178017004 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0016811.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178014618 178016070 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0016812.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178014624 178017988 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0016813.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178014630 178017988 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0016814.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178014632 178017924 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0016815.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178014634 178017988 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0016816.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178015465 178016331 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0016817.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178016137 178017988 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0016818.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178016732 178017981 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0016819.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178016753 178017571 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0016820.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178016793 178017984 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0016821.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178017163 178017986 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0016822.1 MGP_CBAJ_G0014859.1 mouse_genomes_project 1 178017225 178017988 + Gas5 processed_transcript retained_intron MGP_CBAJ_T0000696.1 MGP_CBAJ_G0000636.1 mouse_genomes_project 1 182968680 182969679 + TEC TEC MGP_CBAJ_T0011125.1 MGP_CBAJ_G0009263.1 mouse_genomes_project 1 80860114 80860207 + Gm27507 misc_RNA misc_RNA MGP_CBAJ_T0000604.1 MGP_CBAJ_G0000545.1 mouse_genomes_project 1 148479691 148481782 - TEC TEC MGP_CBAJ_T0005698.1 MGP_CBAJ_G0004775.1 mouse_genomes_project 1 79329851 79346718 - Pinc lincRNA lincRNA MGP_CBAJ_T0005699.1 MGP_CBAJ_G0004775.1 mouse_genomes_project 1 79334422 79346718 - Pinc lincRNA lincRNA MGP_CBAJ_T0011916.1 MGP_CBAJ_G0010028.1 mouse_genomes_project 1 62787136 62794411 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005583.1 MGP_CBAJ_G0004694.1 mouse_genomes_project 1 31038556 31039960 - Gm9898 lincRNA lincRNA MGP_CBAJ_T0002699.1 MGP_CBAJ_G0002568.1 mouse_genomes_project 1 17827469 17873604 - Gm15825 antisense antisense MGP_CBAJ_T0023609.1 MGP_CBAJ_G0016615.1 mouse_genomes_project 1 200647380 200656971 + MGP_CBAJ_P0023609 Tmem63a protein_coding protein_coding MGP_CBAJ_T0023610.1 MGP_CBAJ_G0016615.1 mouse_genomes_project 1 200647494 200659671 + MGP_CBAJ_P0023610 Tmem63a protein_coding nonsense_mediated_decay MGP_CBAJ_T0023611.1 MGP_CBAJ_G0016615.1 mouse_genomes_project 1 200647495 200679681 + MGP_CBAJ_P0023611 Tmem63a protein_coding protein_coding MGP_CBAJ_T0023612.1 MGP_CBAJ_G0016615.1 mouse_genomes_project 1 200647610 200660982 + MGP_CBAJ_P0023612 Tmem63a protein_coding protein_coding MGP_CBAJ_T0023613.1 MGP_CBAJ_G0016615.1 mouse_genomes_project 1 200649071 200679673 + MGP_CBAJ_P0023613 Tmem63a protein_coding protein_coding MGP_CBAJ_T0023614.1 MGP_CBAJ_G0016615.1 mouse_genomes_project 1 200650928 200651737 + MGP_CBAJ_P0023614 Tmem63a protein_coding protein_coding MGP_CBAJ_T0023615.1 MGP_CBAJ_G0016615.1 mouse_genomes_project 1 200650984 200653866 + MGP_CBAJ_P0023615 Tmem63a protein_coding protein_coding MGP_CBAJ_T0023616.1 MGP_CBAJ_G0016615.1 mouse_genomes_project 1 200664947 200665722 + Tmem63a protein_coding retained_intron MGP_CBAJ_T0011903.1 MGP_CBAJ_G0010015.1 mouse_genomes_project 1 58656711 58657517 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0024002.1 MGP_CBAJ_G0016695.1 mouse_genomes_project 1 214263572 214289437 - MGP_CBAJ_P0024002 Traf3ip3 protein_coding protein_coding MGP_CBAJ_T0024003.1 MGP_CBAJ_G0016695.1 mouse_genomes_project 1 214263613 214289650 - MGP_CBAJ_P0024003 Traf3ip3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024004.1 MGP_CBAJ_G0016695.1 mouse_genomes_project 1 214263623 214289650 - MGP_CBAJ_P0024004 Traf3ip3 protein_coding protein_coding MGP_CBAJ_T0024005.1 MGP_CBAJ_G0016695.1 mouse_genomes_project 1 214267335 214272915 - MGP_CBAJ_P0024005 Traf3ip3 protein_coding protein_coding MGP_CBAJ_T0024006.1 MGP_CBAJ_G0016695.1 mouse_genomes_project 1 214267339 214285920 - Traf3ip3 protein_coding retained_intron MGP_CBAJ_T0024007.1 MGP_CBAJ_G0016695.1 mouse_genomes_project 1 214272670 214282413 - MGP_CBAJ_P0024007 Traf3ip3 protein_coding protein_coding MGP_CBAJ_T0024008.1 MGP_CBAJ_G0016695.1 mouse_genomes_project 1 214272759 214275241 - MGP_CBAJ_P0024008 Traf3ip3 protein_coding protein_coding MGP_CBAJ_T0024009.1 MGP_CBAJ_G0016695.1 mouse_genomes_project 1 214273286 214289558 - Traf3ip3 protein_coding retained_intron MGP_CBAJ_T0024010.1 MGP_CBAJ_G0016695.1 mouse_genomes_project 1 214282478 214289619 - Traf3ip3 protein_coding retained_intron MGP_CBAJ_T0024011.1 MGP_CBAJ_G0016695.1 mouse_genomes_project 1 214282633 214286069 - MGP_CBAJ_P0024011 Traf3ip3 protein_coding protein_coding MGP_CBAJ_T0024012.1 MGP_CBAJ_G0016695.1 mouse_genomes_project 1 214286125 214289601 - Traf3ip3 protein_coding processed_transcript MGP_CBAJ_T0024013.1 MGP_CBAJ_G0016695.1 mouse_genomes_project 1 214286132 214289605 - Traf3ip3 protein_coding processed_transcript MGP_CBAJ_T0024014.1 MGP_CBAJ_G0016695.1 mouse_genomes_project 1 214288998 214289806 - Traf3ip3 protein_coding processed_transcript MGP_CBAJ_T0021122.1 MGP_CBAJ_G0016072.1 mouse_genomes_project 1 101399180 101406717 + MGP_CBAJ_P0021122 Aqp12 protein_coding protein_coding MGP_CBAJ_T0098223.1 MGP_CBAJ_G0036496.1 mouse_genomes_project 1 744862 756522 - Gm19938 sense_intronic sense_intronic MGP_CBAJ_T0022469.1 MGP_CBAJ_G0016358.1 mouse_genomes_project 1 172157543 172294311 - MGP_CBAJ_P0022469 Cep350 protein_coding unknown_likely_coding MGP_CBAJ_T0022470.1 MGP_CBAJ_G0016358.1 mouse_genomes_project 1 172157549 172294602 - MGP_CBAJ_P0022470 Cep350 protein_coding protein_coding MGP_CBAJ_T0022471.1 MGP_CBAJ_G0016358.1 mouse_genomes_project 1 172161126 172174007 - Cep350 protein_coding processed_transcript MGP_CBAJ_T0022472.1 MGP_CBAJ_G0016358.1 mouse_genomes_project 1 172175961 172201779 - Cep350 protein_coding processed_transcript MGP_CBAJ_T0022473.1 MGP_CBAJ_G0016358.1 mouse_genomes_project 1 172181357 172200570 - Cep350 protein_coding processed_transcript MGP_CBAJ_T0022474.1 MGP_CBAJ_G0016358.1 mouse_genomes_project 1 172256276 172294237 - MGP_CBAJ_P0022474 Cep350 protein_coding protein_coding MGP_CBAJ_T0022475.1 MGP_CBAJ_G0016358.1 mouse_genomes_project 1 172291325 172294531 - Cep350 protein_coding retained_intron MGP_CBAJ_T0020648.1 MGP_CBAJ_G0015967.1 mouse_genomes_project 1 90272140 90455704 - MGP_CBAJ_P0020648 Sphkap protein_coding protein_coding MGP_CBAJ_T0020649.1 MGP_CBAJ_G0015967.1 mouse_genomes_project 1 90273447 90455511 - MGP_CBAJ_P0020649 Sphkap protein_coding unknown_likely_coding MGP_CBAJ_T0020650.1 MGP_CBAJ_G0015967.1 mouse_genomes_project 1 90273451 90299787 - MGP_CBAJ_P0020650 Sphkap protein_coding protein_coding MGP_CBAJ_T0020651.1 MGP_CBAJ_G0015967.1 mouse_genomes_project 1 90283112 90455669 - Sphkap protein_coding retained_intron MGP_CBAJ_T0020652.1 MGP_CBAJ_G0015967.1 mouse_genomes_project 1 90370352 90455643 - Sphkap protein_coding retained_intron MGP_CBAJ_T0020653.1 MGP_CBAJ_G0015967.1 mouse_genomes_project 1 90423104 90455669 - Sphkap protein_coding retained_intron MGP_CBAJ_T0099810.1 MGP_CBAJ_G0038065.1 mouse_genomes_project 1 178015296 178015358 + Gm22489 snoRNA snoRNA MGP_CBAJ_T0022513.1 MGP_CBAJ_G0016365.1 mouse_genomes_project 1 172790079 172847989 - MGP_CBAJ_P0022513 Soat1 protein_coding protein_coding MGP_CBAJ_T0022514.1 MGP_CBAJ_G0016365.1 mouse_genomes_project 1 172799007 172840626 - MGP_CBAJ_P0022514 Soat1 protein_coding protein_coding MGP_CBAJ_T0022515.1 MGP_CBAJ_G0016365.1 mouse_genomes_project 1 172799941 172801898 - Soat1 protein_coding retained_intron MGP_CBAJ_T0022516.1 MGP_CBAJ_G0016365.1 mouse_genomes_project 1 172800192 172802344 - Soat1 protein_coding retained_intron MGP_CBAJ_T0022517.1 MGP_CBAJ_G0016365.1 mouse_genomes_project 1 172812402 172847898 - Soat1 protein_coding retained_intron MGP_CBAJ_T0022518.1 MGP_CBAJ_G0016365.1 mouse_genomes_project 1 172812828 172847954 - MGP_CBAJ_P0022518 Soat1 protein_coding protein_coding MGP_CBAJ_T0022519.1 MGP_CBAJ_G0016365.1 mouse_genomes_project 1 172818617 172847855 - Soat1 protein_coding retained_intron MGP_CBAJ_T0022520.1 MGP_CBAJ_G0016365.1 mouse_genomes_project 1 172818850 172847922 - MGP_CBAJ_P0022520 Soat1 protein_coding protein_coding MGP_CBAJ_T0000322.1 MGP_CBAJ_G0000267.1 mouse_genomes_project 1 557309 559618 - TEC TEC MGP_CBAJ_T0101488.1 MGP_CBAJ_G0039520.1 mouse_genomes_project 1 154116331 154423198 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0018465.1 MGP_CBAJ_G0015557.1 mouse_genomes_project 1 2065476 2112501 + MGP_CBAJ_P0018465 Lypla1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018466.1 MGP_CBAJ_G0015557.1 mouse_genomes_project 1 2065511 2109365 + MGP_CBAJ_P0018466 Lypla1 protein_coding protein_coding MGP_CBAJ_T0018467.1 MGP_CBAJ_G0015557.1 mouse_genomes_project 1 2065518 2103886 + MGP_CBAJ_P0018467 Lypla1 protein_coding protein_coding MGP_CBAJ_T0018469.1 MGP_CBAJ_G0015557.1 mouse_genomes_project 1 2065584 2107801 + MGP_CBAJ_P0018469 Lypla1 protein_coding protein_coding MGP_CBAJ_T0018470.1 MGP_CBAJ_G0015557.1 mouse_genomes_project 1 2065586 2103569 + MGP_CBAJ_P0018470 Lypla1 protein_coding protein_coding MGP_CBAJ_T0018471.1 MGP_CBAJ_G0015557.1 mouse_genomes_project 1 2065599 2107979 + MGP_CBAJ_P0018471 Lypla1 protein_coding protein_coding MGP_CBAJ_T0018472.1 MGP_CBAJ_G0015557.1 mouse_genomes_project 1 2065629 2109365 + MGP_CBAJ_P0018472 Lypla1 protein_coding protein_coding MGP_CBAJ_T0018473.1 MGP_CBAJ_G0015557.1 mouse_genomes_project 1 2099501 2105424 + Lypla1 protein_coding retained_intron MGP_CBAJ_T0023782.1 MGP_CBAJ_G0016652.1 mouse_genomes_project 1 205723158 205736957 + MGP_CBAJ_P0023782 Slc30a10 protein_coding protein_coding MGP_CBAJ_T0023336.1 MGP_CBAJ_G0016542.1 mouse_genomes_project 1 191752808 191753799 + MGP_CBAJ_P0023336 Olfr418 protein_coding protein_coding MGP_CBAJ_T0018476.1 MGP_CBAJ_G0015560.1 mouse_genomes_project 1 2180979 2389517 - MGP_CBAJ_P0018476 Rgs20 protein_coding protein_coding MGP_CBAJ_T0018477.1 MGP_CBAJ_G0015560.1 mouse_genomes_project 1 2181849 2320338 - MGP_CBAJ_P0018477 Rgs20 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018478.1 MGP_CBAJ_G0015560.1 mouse_genomes_project 1 2181849 2320338 - MGP_CBAJ_P0018478 Rgs20 protein_coding protein_coding MGP_CBAJ_T0018479.1 MGP_CBAJ_G0015560.1 mouse_genomes_project 1 2183717 2389514 - MGP_CBAJ_P0018479 Rgs20 protein_coding protein_coding MGP_CBAJ_T0018480.1 MGP_CBAJ_G0015560.1 mouse_genomes_project 1 2202228 2320338 - Rgs20 protein_coding retained_intron MGP_CBAJ_T0018481.1 MGP_CBAJ_G0015560.1 mouse_genomes_project 1 2381782 2389505 - Rgs20 protein_coding processed_transcript MGP_CBAJ_T0005953.1 MGP_CBAJ_G0004977.1 mouse_genomes_project 1 206518327 206573581 + Gm37134 lincRNA lincRNA MGP_CBAJ_T0023200.1 MGP_CBAJ_G0016505.1 mouse_genomes_project 1 189827913 189847609 - MGP_CBAJ_P0023200 Ly9 protein_coding protein_coding MGP_CBAJ_T0023201.1 MGP_CBAJ_G0016505.1 mouse_genomes_project 1 189827922 189847557 - MGP_CBAJ_P0023201 Ly9 protein_coding protein_coding MGP_CBAJ_T0023202.1 MGP_CBAJ_G0016505.1 mouse_genomes_project 1 189827938 189847533 - MGP_CBAJ_P0023202 Ly9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023203.1 MGP_CBAJ_G0016505.1 mouse_genomes_project 1 189831872 189847528 - MGP_CBAJ_P0023203 Ly9 protein_coding protein_coding MGP_CBAJ_T0023204.1 MGP_CBAJ_G0016505.1 mouse_genomes_project 1 189840795 189847559 - Ly9 protein_coding retained_intron MGP_CBAJ_T0022714.1 MGP_CBAJ_G0016398.1 mouse_genomes_project 1 179079551 179083802 + MGP_CBAJ_P0022714 Pigc protein_coding protein_coding MGP_CBAJ_T0022715.1 MGP_CBAJ_G0016398.1 mouse_genomes_project 1 179079553 179082697 + MGP_CBAJ_P0022715 Pigc protein_coding protein_coding MGP_CBAJ_T0022716.1 MGP_CBAJ_G0016398.1 mouse_genomes_project 1 179079593 179083801 + MGP_CBAJ_P0022716 Pigc protein_coding protein_coding MGP_CBAJ_T0022717.1 MGP_CBAJ_G0016398.1 mouse_genomes_project 1 179079664 179081239 + MGP_CBAJ_P0022717 Pigc protein_coding protein_coding MGP_CBAJ_T0022718.1 MGP_CBAJ_G0016398.1 mouse_genomes_project 1 179079667 179080898 + MGP_CBAJ_P0022718 Pigc protein_coding protein_coding MGP_CBAJ_T0019319.1 MGP_CBAJ_G0015724.1 mouse_genomes_project 1 45794301 45806265 + MGP_CBAJ_P0019319 1500015O10Rik protein_coding protein_coding MGP_CBAJ_T0000402.1 MGP_CBAJ_G0000344.1 mouse_genomes_project 1 34415811 34418125 - TEC TEC MGP_CBAJ_T0012037.1 MGP_CBAJ_G0010149.1 mouse_genomes_project 1 115628683 115628944 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002821.1 MGP_CBAJ_G0002662.1 mouse_genomes_project 1 146675023 146694420 - Gm19461 antisense antisense MGP_CBAJ_T0002822.1 MGP_CBAJ_G0002662.1 mouse_genomes_project 1 146675833 146681757 - Gm19461 antisense antisense MGP_CBAJ_T0002823.1 MGP_CBAJ_G0002662.1 mouse_genomes_project 1 146678528 146678918 - Gm19461 antisense antisense MGP_CBAJ_T0002824.1 MGP_CBAJ_G0002662.1 mouse_genomes_project 1 146678908 146680991 - Gm19461 antisense antisense MGP_CBAJ_T0002825.1 MGP_CBAJ_G0002662.1 mouse_genomes_project 1 146681179 146683310 - Gm19461 antisense antisense MGP_CBAJ_T0000354.1 MGP_CBAJ_G0000299.1 mouse_genomes_project 1 12005531 12007780 - TEC TEC MGP_CBAJ_T0022958.1 MGP_CBAJ_G0016450.1 mouse_genomes_project 1 184648126 184748985 + MGP_CBAJ_P0022958 Fam78b protein_coding protein_coding MGP_CBAJ_T0022959.1 MGP_CBAJ_G0016450.1 mouse_genomes_project 1 184648126 184748985 + MGP_CBAJ_P0022959 Fam78b protein_coding protein_coding MGP_CBAJ_T0022960.1 MGP_CBAJ_G0016450.1 mouse_genomes_project 1 184648141 184746760 + MGP_CBAJ_P0022960 Fam78b protein_coding nonsense_mediated_decay MGP_CBAJ_T0022961.1 MGP_CBAJ_G0016450.1 mouse_genomes_project 1 184648175 184738817 + MGP_CBAJ_P0022961 Fam78b protein_coding protein_coding MGP_CBAJ_T0022962.1 MGP_CBAJ_G0016450.1 mouse_genomes_project 1 184648289 184746407 + MGP_CBAJ_P0022962 Fam78b protein_coding nonsense_mediated_decay MGP_CBAJ_T0022963.1 MGP_CBAJ_G0016450.1 mouse_genomes_project 1 184648298 184748692 + MGP_CBAJ_P0022963 Fam78b protein_coding nonsense_mediated_decay MGP_CBAJ_T0021632.1 MGP_CBAJ_G0016184.1 mouse_genomes_project 1 144069249 144084249 + MGP_CBAJ_P0021632 Fcmr protein_coding protein_coding MGP_CBAJ_T0021633.1 MGP_CBAJ_G0016184.1 mouse_genomes_project 1 144069360 144078646 + Fcmr protein_coding processed_transcript MGP_CBAJ_T0021634.1 MGP_CBAJ_G0016184.1 mouse_genomes_project 1 144081683 144084237 + Fcmr protein_coding processed_transcript MGP_CBAJ_T0021635.1 MGP_CBAJ_G0016184.1 mouse_genomes_project 1 144081856 144084248 + Fcmr protein_coding processed_transcript MGP_CBAJ_T0011911.1 MGP_CBAJ_G0010023.1 mouse_genomes_project 1 61179614 61180591 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0022815.1 MGP_CBAJ_G0016418.1 mouse_genomes_project 1 181393217 181402658 + MGP_CBAJ_P0022815 Sele protein_coding protein_coding MGP_CBAJ_T0023287.1 MGP_CBAJ_G0016524.1 mouse_genomes_project 1 190658977 190694943 + MGP_CBAJ_P0023287 Kcnj10 protein_coding protein_coding MGP_CBAJ_T0099752.1 MGP_CBAJ_G0038007.1 mouse_genomes_project 1 44847827 44847961 - Gm23126 snoRNA snoRNA MGP_CBAJ_T0098510.1 MGP_CBAJ_G0036765.1 mouse_genomes_project 1 7173185 7173288 + Gm24765 snRNA snRNA MGP_CBAJ_T0000424.1 MGP_CBAJ_G0000366.1 mouse_genomes_project 1 42214261 42218192 - TEC TEC MGP_CBAJ_T0011993.1 MGP_CBAJ_G0010105.1 mouse_genomes_project 1 93729036 93729363 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000753.1 MGP_CBAJ_G0000691.1 mouse_genomes_project 1 208187512 208188005 - TEC TEC MGP_CBAJ_T0021806.1 MGP_CBAJ_G0016221.1 mouse_genomes_project 1 146555545 146564009 + MGP_CBAJ_P0021806 Ppp1r15b protein_coding protein_coding MGP_CBAJ_T0021807.1 MGP_CBAJ_G0016221.1 mouse_genomes_project 1 146555745 146564009 + Ppp1r15b protein_coding processed_transcript MGP_CBAJ_T0099814.1 MGP_CBAJ_G0038069.1 mouse_genomes_project 1 178016796 178016880 + Mir5117 snoRNA snoRNA MGP_CBAJ_T0000713.1 MGP_CBAJ_G0000653.1 mouse_genomes_project 1 195373952 195377506 - TEC TEC MGP_CBAJ_T0021539.1 MGP_CBAJ_G0016164.1 mouse_genomes_project 1 140499097 140518538 + Ccnt2 protein_coding retained_intron MGP_CBAJ_T0021540.1 MGP_CBAJ_G0016164.1 mouse_genomes_project 1 140499097 140520749 + Ccnt2 protein_coding retained_intron MGP_CBAJ_T0021541.1 MGP_CBAJ_G0016164.1 mouse_genomes_project 1 140499097 140520749 + Ccnt2 protein_coding retained_intron MGP_CBAJ_T0021542.1 MGP_CBAJ_G0016164.1 mouse_genomes_project 1 140499097 140523377 + Ccnt2 protein_coding retained_intron MGP_CBAJ_T0021543.1 MGP_CBAJ_G0016164.1 mouse_genomes_project 1 140499097 140536239 + MGP_CBAJ_P0021543 Ccnt2 protein_coding protein_coding MGP_CBAJ_T0021544.1 MGP_CBAJ_G0016164.1 mouse_genomes_project 1 140499097 140530955 + MGP_CBAJ_P0021544 Ccnt2 protein_coding protein_coding MGP_CBAJ_T0021545.1 MGP_CBAJ_G0016164.1 mouse_genomes_project 1 140521547 140536239 + Ccnt2 protein_coding processed_transcript MGP_CBAJ_T0019670.1 MGP_CBAJ_G0015789.1 mouse_genomes_project 1 62172737 62246957 + MGP_CBAJ_P0019670 protein_coding protein_coding MGP_CBAJ_T0019671.1 MGP_CBAJ_G0015789.1 mouse_genomes_project 1 62172772 62235751 + protein_coding processed_transcript MGP_CBAJ_T0019672.1 MGP_CBAJ_G0015789.1 mouse_genomes_project 1 62172791 62177768 + protein_coding processed_transcript MGP_CBAJ_T0019673.1 MGP_CBAJ_G0015789.1 mouse_genomes_project 1 62173558 62175714 + protein_coding retained_intron MGP_CBAJ_T0019674.1 MGP_CBAJ_G0015789.1 mouse_genomes_project 1 62216179 62220717 + protein_coding retained_intron MGP_CBAJ_T0016716.1 MGP_CBAJ_G0014827.1 mouse_genomes_project 1 7282386 7355986 - 2610203C22Rik processed_transcript antisense MGP_CBAJ_T0016717.1 MGP_CBAJ_G0014827.1 mouse_genomes_project 1 7287361 7356031 - 2610203C22Rik processed_transcript retained_intron MGP_CBAJ_T0016718.1 MGP_CBAJ_G0014827.1 mouse_genomes_project 1 7325628 7356038 - 2610203C22Rik processed_transcript antisense MGP_CBAJ_T0016719.1 MGP_CBAJ_G0014827.1 mouse_genomes_project 1 7326233 7356069 - 2610203C22Rik processed_transcript antisense MGP_CBAJ_T0016720.1 MGP_CBAJ_G0014827.1 mouse_genomes_project 1 7328636 7356058 - 2610203C22Rik processed_transcript antisense MGP_CBAJ_T0022053.1 MGP_CBAJ_G0016276.1 mouse_genomes_project 1 149896944 149897511 + MGP_CBAJ_P0022053 Ascl5 protein_coding protein_coding MGP_CBAJ_T0023365.1 MGP_CBAJ_G0016555.1 mouse_genomes_project 1 192844030 192846318 + MGP_CBAJ_P0023365 Olfr433 protein_coding protein_coding MGP_CBAJ_T0019179.1 MGP_CBAJ_G0015692.1 mouse_genomes_project 1 39363500 39445838 - MGP_CBAJ_P0019179 Rev1 protein_coding protein_coding MGP_CBAJ_T0019180.1 MGP_CBAJ_G0015692.1 mouse_genomes_project 1 39363510 39400530 - Rev1 protein_coding retained_intron MGP_CBAJ_T0019181.1 MGP_CBAJ_G0015692.1 mouse_genomes_project 1 39364015 39364965 - Rev1 protein_coding retained_intron MGP_CBAJ_T0019182.1 MGP_CBAJ_G0015692.1 mouse_genomes_project 1 39367234 39368418 - Rev1 protein_coding retained_intron MGP_CBAJ_T0019183.1 MGP_CBAJ_G0015692.1 mouse_genomes_project 1 39380097 39396150 - MGP_CBAJ_P0019183 Rev1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019184.1 MGP_CBAJ_G0015692.1 mouse_genomes_project 1 39383867 39398019 - MGP_CBAJ_P0019184 Rev1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019185.1 MGP_CBAJ_G0015692.1 mouse_genomes_project 1 39386995 39393728 - Rev1 protein_coding processed_transcript MGP_CBAJ_T0019186.1 MGP_CBAJ_G0015692.1 mouse_genomes_project 1 39391443 39396216 - Rev1 protein_coding retained_intron MGP_CBAJ_T0019187.1 MGP_CBAJ_G0015692.1 mouse_genomes_project 1 39406393 39444477 - MGP_CBAJ_P0019187 Rev1 protein_coding protein_coding MGP_CBAJ_T0019188.1 MGP_CBAJ_G0015692.1 mouse_genomes_project 1 39415089 39444493 - MGP_CBAJ_P0019188 Rev1 protein_coding protein_coding MGP_CBAJ_T0019189.1 MGP_CBAJ_G0015692.1 mouse_genomes_project 1 39423886 39445982 - MGP_CBAJ_P0019189 Rev1 protein_coding protein_coding MGP_CBAJ_T0005946.1 MGP_CBAJ_G0004971.1 mouse_genomes_project 1 204916804 204919352 + Gm34342 lincRNA lincRNA MGP_CBAJ_T0022670.1 MGP_CBAJ_G0016389.1 mouse_genomes_project 1 178060562 178079261 + MGP_CBAJ_P0022670 Cenpl protein_coding protein_coding MGP_CBAJ_T0022671.1 MGP_CBAJ_G0016389.1 mouse_genomes_project 1 178060616 178078879 + MGP_CBAJ_P0022671 Cenpl protein_coding protein_coding MGP_CBAJ_T0022672.1 MGP_CBAJ_G0016389.1 mouse_genomes_project 1 178060616 178078879 + MGP_CBAJ_P0022672 Cenpl protein_coding protein_coding MGP_CBAJ_T0022673.1 MGP_CBAJ_G0016389.1 mouse_genomes_project 1 178060741 178078865 + MGP_CBAJ_P0022673 Cenpl protein_coding nonsense_mediated_decay MGP_CBAJ_T0022674.1 MGP_CBAJ_G0016389.1 mouse_genomes_project 1 178060799 178078865 + MGP_CBAJ_P0022674 Cenpl protein_coding nonsense_mediated_decay MGP_CBAJ_T0022675.1 MGP_CBAJ_G0016389.1 mouse_genomes_project 1 178060815 178079265 + MGP_CBAJ_P0022675 Cenpl protein_coding nonsense_mediated_decay MGP_CBAJ_T0022676.1 MGP_CBAJ_G0016389.1 mouse_genomes_project 1 178060834 178076039 + MGP_CBAJ_P0022676 Cenpl protein_coding nonsense_mediated_decay MGP_CBAJ_T0022677.1 MGP_CBAJ_G0016389.1 mouse_genomes_project 1 178060865 178078879 + MGP_CBAJ_P0022677 Cenpl protein_coding nonsense_mediated_decay MGP_CBAJ_T0022678.1 MGP_CBAJ_G0016389.1 mouse_genomes_project 1 178062253 178062853 + Cenpl protein_coding processed_transcript MGP_CBAJ_T0022679.1 MGP_CBAJ_G0016389.1 mouse_genomes_project 1 178065728 178075950 + Cenpl protein_coding processed_transcript MGP_CBAJ_T0101464.1 MGP_CBAJ_G0039496.1 mouse_genomes_project 1 95913597 95914381 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0005896.1 MGP_CBAJ_G0004934.1 mouse_genomes_project 1 183970853 183972894 - Gm15853 lincRNA lincRNA MGP_CBAJ_T0002867.1 MGP_CBAJ_G0002696.1 mouse_genomes_project 1 180216319 180318762 + Gm37273 antisense antisense MGP_CBAJ_T0005709.1 MGP_CBAJ_G0004782.1 mouse_genomes_project 1 82634450 82747986 + Gm29069 lincRNA lincRNA MGP_CBAJ_T0101242.1 MGP_CBAJ_G0039383.1 mouse_genomes_project 1 56552741 56562126 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101243.1 MGP_CBAJ_G0039383.1 mouse_genomes_project 1 56552767 56574337 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0012164.1 MGP_CBAJ_G0010276.1 mouse_genomes_project 1 175904326 175904809 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0021290.1 MGP_CBAJ_G0016107.1 mouse_genomes_project 1 115719698 115745174 + 2310035C23Rik protein_coding processed_transcript MGP_CBAJ_T0021291.1 MGP_CBAJ_G0016107.1 mouse_genomes_project 1 115719698 115817214 + MGP_CBAJ_P0021291 2310035C23Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0021292.1 MGP_CBAJ_G0016107.1 mouse_genomes_project 1 115719720 115817217 + MGP_CBAJ_P0021292 2310035C23Rik protein_coding protein_coding MGP_CBAJ_T0021293.1 MGP_CBAJ_G0016107.1 mouse_genomes_project 1 115719750 115818333 + MGP_CBAJ_P0021293 2310035C23Rik protein_coding protein_coding MGP_CBAJ_T0021294.1 MGP_CBAJ_G0016107.1 mouse_genomes_project 1 115719760 115814798 + MGP_CBAJ_P0021294 2310035C23Rik protein_coding protein_coding MGP_CBAJ_T0021295.1 MGP_CBAJ_G0016107.1 mouse_genomes_project 1 115719774 115720988 + 2310035C23Rik protein_coding processed_transcript MGP_CBAJ_T0021296.1 MGP_CBAJ_G0016107.1 mouse_genomes_project 1 115720278 115799602 + 2310035C23Rik protein_coding retained_intron MGP_CBAJ_T0021297.1 MGP_CBAJ_G0016107.1 mouse_genomes_project 1 115756586 115818328 + MGP_CBAJ_P0021297 2310035C23Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0021298.1 MGP_CBAJ_G0016107.1 mouse_genomes_project 1 115763768 115778097 + 2310035C23Rik protein_coding retained_intron MGP_CBAJ_T0021299.1 MGP_CBAJ_G0016107.1 mouse_genomes_project 1 115791973 115795674 + 2310035C23Rik protein_coding retained_intron MGP_CBAJ_T0021300.1 MGP_CBAJ_G0016107.1 mouse_genomes_project 1 115801312 115814612 + 2310035C23Rik protein_coding retained_intron MGP_CBAJ_T0021301.1 MGP_CBAJ_G0016107.1 mouse_genomes_project 1 115802080 115812080 + 2310035C23Rik protein_coding retained_intron MGP_CBAJ_T0012047.1 MGP_CBAJ_G0010159.1 mouse_genomes_project 1 119223349 119225220 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0019223.1 MGP_CBAJ_G0015701.1 mouse_genomes_project 1 41026717 41042774 + MGP_CBAJ_P0019223 Cnot11 protein_coding protein_coding MGP_CBAJ_T0019224.1 MGP_CBAJ_G0015701.1 mouse_genomes_project 1 41027527 41042758 + MGP_CBAJ_P0019224 Cnot11 protein_coding protein_coding MGP_CBAJ_T0019225.1 MGP_CBAJ_G0015701.1 mouse_genomes_project 1 41029972 41042221 + Cnot11 protein_coding retained_intron MGP_CBAJ_T0019226.1 MGP_CBAJ_G0015701.1 mouse_genomes_project 1 41031761 41041139 + MGP_CBAJ_P0019226 Cnot11 protein_coding protein_coding MGP_CBAJ_T0020099.1 MGP_CBAJ_G0015865.1 mouse_genomes_project 1 76327587 76514656 + MGP_CBAJ_P0020099 Vwc2l protein_coding protein_coding MGP_CBAJ_T0020100.1 MGP_CBAJ_G0015865.1 mouse_genomes_project 1 76327624 76334075 + Vwc2l protein_coding retained_intron MGP_CBAJ_T0020101.1 MGP_CBAJ_G0015865.1 mouse_genomes_project 1 76327774 76514641 + MGP_CBAJ_P0020101 Vwc2l protein_coding protein_coding MGP_CBAJ_T0020102.1 MGP_CBAJ_G0015865.1 mouse_genomes_project 1 76327795 76511748 + MGP_CBAJ_P0020102 Vwc2l protein_coding protein_coding MGP_CBAJ_T0022138.1 MGP_CBAJ_G0016293.1 mouse_genomes_project 1 153383293 153592923 - MGP_CBAJ_P0022138 Crb1 protein_coding protein_coding MGP_CBAJ_T0022139.1 MGP_CBAJ_G0016293.1 mouse_genomes_project 1 153384481 153388488 - Crb1 protein_coding retained_intron MGP_CBAJ_T0022140.1 MGP_CBAJ_G0016293.1 mouse_genomes_project 1 153415694 153592946 - MGP_CBAJ_P0022140 Crb1 protein_coding protein_coding MGP_CBAJ_T0022141.1 MGP_CBAJ_G0016293.1 mouse_genomes_project 1 153435805 153448184 - Crb1 protein_coding retained_intron MGP_CBAJ_T0022142.1 MGP_CBAJ_G0016293.1 mouse_genomes_project 1 153437850 153592887 - MGP_CBAJ_P0022142 Crb1 protein_coding protein_coding MGP_CBAJ_T0022143.1 MGP_CBAJ_G0016293.1 mouse_genomes_project 1 153438912 153528810 - MGP_CBAJ_P0022143 Crb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022144.1 MGP_CBAJ_G0016293.1 mouse_genomes_project 1 153438927 153528830 - MGP_CBAJ_P0022144 Crb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0005714.1 MGP_CBAJ_G0004786.1 mouse_genomes_project 1 84341678 84376256 - Gm28387 lincRNA lincRNA MGP_CBAJ_T0021720.1 MGP_CBAJ_G0016206.1 mouse_genomes_project 1 145303999 145352029 - MGP_CBAJ_P0021720 Mfsd4a protein_coding protein_coding MGP_CBAJ_T0021721.1 MGP_CBAJ_G0016206.1 mouse_genomes_project 1 145304442 145310571 - Mfsd4a protein_coding retained_intron MGP_CBAJ_T0021722.1 MGP_CBAJ_G0016206.1 mouse_genomes_project 1 145307813 145352083 - MGP_CBAJ_P0021722 Mfsd4a protein_coding protein_coding MGP_CBAJ_T0021723.1 MGP_CBAJ_G0016206.1 mouse_genomes_project 1 145308345 145351944 - MGP_CBAJ_P0021723 Mfsd4a protein_coding protein_coding MGP_CBAJ_T0021724.1 MGP_CBAJ_G0016206.1 mouse_genomes_project 1 145308345 145352081 - MGP_CBAJ_P0021724 Mfsd4a protein_coding protein_coding MGP_CBAJ_T0021725.1 MGP_CBAJ_G0016206.1 mouse_genomes_project 1 145308372 145352180 - MGP_CBAJ_P0021725 Mfsd4a protein_coding nonsense_mediated_decay MGP_CBAJ_T0021726.1 MGP_CBAJ_G0016206.1 mouse_genomes_project 1 145321020 145352010 - MGP_CBAJ_P0021726 Mfsd4a protein_coding protein_coding MGP_CBAJ_T0021727.1 MGP_CBAJ_G0016206.1 mouse_genomes_project 1 145321029 145352051 - MGP_CBAJ_P0021727 Mfsd4a protein_coding protein_coding MGP_CBAJ_T0021728.1 MGP_CBAJ_G0016206.1 mouse_genomes_project 1 145323063 145326172 - Mfsd4a protein_coding processed_transcript MGP_CBAJ_T0021729.1 MGP_CBAJ_G0016206.1 mouse_genomes_project 1 145323167 145352018 - MGP_CBAJ_P0021729 Mfsd4a protein_coding protein_coding MGP_CBAJ_T0021730.1 MGP_CBAJ_G0016206.1 mouse_genomes_project 1 145324894 145330813 - Mfsd4a protein_coding retained_intron MGP_CBAJ_T0021731.1 MGP_CBAJ_G0016206.1 mouse_genomes_project 1 145330690 145338279 - MGP_CBAJ_P0021731 Mfsd4a protein_coding nonsense_mediated_decay MGP_CBAJ_T0002781.1 MGP_CBAJ_G0002631.1 mouse_genomes_project 1 95515686 95516639 - Gm19582 antisense antisense MGP_CBAJ_T0009440.1 MGP_CBAJ_G0007578.1 mouse_genomes_project 1 200231041 200231108 + Mir6904 miRNA miRNA MGP_CBAJ_T0000654.1 MGP_CBAJ_G0000594.1 mouse_genomes_project 1 172100557 172100792 + TEC TEC MGP_CBAJ_T0011827.1 MGP_CBAJ_G0009939.1 mouse_genomes_project 1 33929114 33930807 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0018829.1 MGP_CBAJ_G0015629.1 mouse_genomes_project 1 23187582 23253557 - Smap1 protein_coding processed_transcript MGP_CBAJ_T0018830.1 MGP_CBAJ_G0015629.1 mouse_genomes_project 1 23188354 23267948 - MGP_CBAJ_P0018830 Smap1 protein_coding protein_coding MGP_CBAJ_T0018831.1 MGP_CBAJ_G0015629.1 mouse_genomes_project 1 23188907 23190507 - Smap1 protein_coding processed_transcript MGP_CBAJ_T0018832.1 MGP_CBAJ_G0015629.1 mouse_genomes_project 1 23189158 23267812 - MGP_CBAJ_P0018832 Smap1 protein_coding protein_coding MGP_CBAJ_T0018833.1 MGP_CBAJ_G0015629.1 mouse_genomes_project 1 23191009 23214584 - Smap1 protein_coding processed_transcript MGP_CBAJ_T0018834.1 MGP_CBAJ_G0015629.1 mouse_genomes_project 1 23191262 23253524 - Smap1 protein_coding processed_transcript MGP_CBAJ_T0018835.1 MGP_CBAJ_G0015629.1 mouse_genomes_project 1 23191524 23233164 - Smap1 protein_coding retained_intron MGP_CBAJ_T0022226.1 MGP_CBAJ_G0016313.1 mouse_genomes_project 1 165454144 165563905 - MGP_CBAJ_P0022226 Pla2g4a protein_coding protein_coding MGP_CBAJ_T0022227.1 MGP_CBAJ_G0016313.1 mouse_genomes_project 1 165454569 165577903 - MGP_CBAJ_P0022227 Pla2g4a protein_coding protein_coding MGP_CBAJ_T0022228.1 MGP_CBAJ_G0016313.1 mouse_genomes_project 1 165520566 165608320 - MGP_CBAJ_P0022228 Pla2g4a protein_coding protein_coding MGP_CBAJ_T0022229.1 MGP_CBAJ_G0016313.1 mouse_genomes_project 1 165520606 165543119 - Pla2g4a protein_coding processed_transcript MGP_CBAJ_T0022230.1 MGP_CBAJ_G0016313.1 mouse_genomes_project 1 165560342 165608346 - Pla2g4a protein_coding retained_intron MGP_CBAJ_T0022231.1 MGP_CBAJ_G0016313.1 mouse_genomes_project 1 165577707 165608317 - Pla2g4a protein_coding processed_transcript MGP_CBAJ_T0005903.1 MGP_CBAJ_G0004940.1 mouse_genomes_project 1 188144070 188146519 - Gm37502 lincRNA lincRNA MGP_CBAJ_T0002885.1 MGP_CBAJ_G0002711.1 mouse_genomes_project 1 190383311 190386074 - Gm37756 antisense antisense MGP_CBAJ_T0000479.1 MGP_CBAJ_G0000421.1 mouse_genomes_project 1 75864169 75866569 - TEC TEC MGP_CBAJ_T0000566.1 MGP_CBAJ_G0000508.1 mouse_genomes_project 1 135726150 135733382 - TEC TEC MGP_CBAJ_T0099753.1 MGP_CBAJ_G0038008.1 mouse_genomes_project 1 45970485 45970610 + Gm26352 snoRNA snoRNA MGP_CBAJ_T0012195.1 MGP_CBAJ_G0010307.1 mouse_genomes_project 1 191163657 191164088 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0019595.1 MGP_CBAJ_G0015774.1 mouse_genomes_project 1 58745737 58771288 + MGP_CBAJ_P0019595 Mob4 protein_coding protein_coding MGP_CBAJ_T0019596.1 MGP_CBAJ_G0015774.1 mouse_genomes_project 1 58745737 58774667 + MGP_CBAJ_P0019596 Mob4 protein_coding protein_coding MGP_CBAJ_T0019597.1 MGP_CBAJ_G0015774.1 mouse_genomes_project 1 58745766 58774666 + Mob4 protein_coding retained_intron MGP_CBAJ_T0019598.1 MGP_CBAJ_G0015774.1 mouse_genomes_project 1 58745788 58770349 + MGP_CBAJ_P0019598 Mob4 protein_coding protein_coding MGP_CBAJ_T0019599.1 MGP_CBAJ_G0015774.1 mouse_genomes_project 1 58745793 58770709 + MGP_CBAJ_P0019599 Mob4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019600.1 MGP_CBAJ_G0015774.1 mouse_genomes_project 1 58745826 58770133 + MGP_CBAJ_P0019600 Mob4 protein_coding protein_coding MGP_CBAJ_T0019601.1 MGP_CBAJ_G0015774.1 mouse_genomes_project 1 58745832 58759481 + Mob4 protein_coding retained_intron MGP_CBAJ_T0019602.1 MGP_CBAJ_G0015774.1 mouse_genomes_project 1 58761730 58762618 + Mob4 protein_coding retained_intron MGP_CBAJ_T0000380.1 MGP_CBAJ_G0000323.1 mouse_genomes_project 1 25183891 25186833 - TEC TEC MGP_CBAJ_T0020969.1 MGP_CBAJ_G0016039.1 mouse_genomes_project 1 99057569 99104613 + MGP_CBAJ_P0020969 Mlph protein_coding protein_coding MGP_CBAJ_T0020970.1 MGP_CBAJ_G0016039.1 mouse_genomes_project 1 99070167 99070921 + MGP_CBAJ_P0020970 Mlph protein_coding protein_coding MGP_CBAJ_T0020971.1 MGP_CBAJ_G0016039.1 mouse_genomes_project 1 99081650 99082722 + Mlph protein_coding retained_intron MGP_CBAJ_T0023698.1 MGP_CBAJ_G0016634.1 mouse_genomes_project 1 203005381 203026103 + MGP_CBAJ_P0023698 Tlr5 protein_coding protein_coding MGP_CBAJ_T0023699.1 MGP_CBAJ_G0016634.1 mouse_genomes_project 1 203005381 203026456 + MGP_CBAJ_P0023699 Tlr5 protein_coding protein_coding MGP_CBAJ_T0023700.1 MGP_CBAJ_G0016634.1 mouse_genomes_project 1 203005415 203020907 + Tlr5 protein_coding processed_transcript MGP_CBAJ_T0023701.1 MGP_CBAJ_G0016634.1 mouse_genomes_project 1 203005421 203020671 + Tlr5 protein_coding processed_transcript MGP_CBAJ_T0023702.1 MGP_CBAJ_G0016634.1 mouse_genomes_project 1 203022587 203026411 + MGP_CBAJ_P0023702 Tlr5 protein_coding protein_coding MGP_CBAJ_T0023653.1 MGP_CBAJ_G0016625.1 mouse_genomes_project 1 201778485 201932875 - MGP_CBAJ_P0023653 Enah protein_coding protein_coding MGP_CBAJ_T0023654.1 MGP_CBAJ_G0016625.1 mouse_genomes_project 1 201786477 201933200 - MGP_CBAJ_P0023654 Enah protein_coding protein_coding MGP_CBAJ_T0023655.1 MGP_CBAJ_G0016625.1 mouse_genomes_project 1 201786522 201933190 - MGP_CBAJ_P0023655 Enah protein_coding protein_coding MGP_CBAJ_T0023656.1 MGP_CBAJ_G0016625.1 mouse_genomes_project 1 201786522 201933190 - MGP_CBAJ_P0023656 Enah protein_coding protein_coding MGP_CBAJ_T0023657.1 MGP_CBAJ_G0016625.1 mouse_genomes_project 1 201787401 201790480 - Enah protein_coding retained_intron MGP_CBAJ_T0023658.1 MGP_CBAJ_G0016625.1 mouse_genomes_project 1 201787555 201788906 - Enah protein_coding retained_intron MGP_CBAJ_T0023659.1 MGP_CBAJ_G0016625.1 mouse_genomes_project 1 201787583 201922444 - MGP_CBAJ_P0023659 Enah protein_coding protein_coding MGP_CBAJ_T0023660.1 MGP_CBAJ_G0016625.1 mouse_genomes_project 1 201787590 201932875 - MGP_CBAJ_P0023660 Enah protein_coding protein_coding MGP_CBAJ_T0023661.1 MGP_CBAJ_G0016625.1 mouse_genomes_project 1 201787590 201932875 - MGP_CBAJ_P0023661 Enah protein_coding protein_coding MGP_CBAJ_T0023662.1 MGP_CBAJ_G0016625.1 mouse_genomes_project 1 201787590 201932875 - MGP_CBAJ_P0023662 Enah protein_coding protein_coding MGP_CBAJ_T0023663.1 MGP_CBAJ_G0016625.1 mouse_genomes_project 1 201787785 201799432 - Enah protein_coding retained_intron MGP_CBAJ_T0023664.1 MGP_CBAJ_G0016625.1 mouse_genomes_project 1 201792783 201794673 - Enah protein_coding retained_intron MGP_CBAJ_T0023665.1 MGP_CBAJ_G0016625.1 mouse_genomes_project 1 201801519 201805788 - MGP_CBAJ_P0023665 Enah protein_coding protein_coding MGP_CBAJ_T0023666.1 MGP_CBAJ_G0016625.1 mouse_genomes_project 1 201805222 201847066 - Enah protein_coding retained_intron MGP_CBAJ_T0023667.1 MGP_CBAJ_G0016625.1 mouse_genomes_project 1 201817516 201825250 - Enah protein_coding retained_intron MGP_CBAJ_T0023668.1 MGP_CBAJ_G0016625.1 mouse_genomes_project 1 201846664 201932890 - Enah protein_coding retained_intron MGP_CBAJ_T0011998.1 MGP_CBAJ_G0010110.1 mouse_genomes_project 1 95112629 95112752 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002770.1 MGP_CBAJ_G0002621.1 mouse_genomes_project 1 81348966 81352016 + Gm28902 antisense antisense MGP_CBAJ_T0022846.1 MGP_CBAJ_G0016426.1 mouse_genomes_project 1 181826635 181850428 - MGP_CBAJ_P0022846 Atp1b1 protein_coding protein_coding MGP_CBAJ_T0022847.1 MGP_CBAJ_G0016426.1 mouse_genomes_project 1 181830985 181833246 - Atp1b1 protein_coding processed_transcript MGP_CBAJ_T0022848.1 MGP_CBAJ_G0016426.1 mouse_genomes_project 1 181830985 181845863 - MGP_CBAJ_P0022848 Atp1b1 protein_coding protein_coding MGP_CBAJ_T0022849.1 MGP_CBAJ_G0016426.1 mouse_genomes_project 1 181845347 181850095 - Atp1b1 protein_coding retained_intron MGP_CBAJ_T0000535.1 MGP_CBAJ_G0000477.1 mouse_genomes_project 1 101977654 101980041 + TEC TEC MGP_CBAJ_T0020186.1 MGP_CBAJ_G0015885.1 mouse_genomes_project 1 80249003 80249812 + MGP_CBAJ_P0020186 Arpc2 protein_coding protein_coding MGP_CBAJ_T0020187.1 MGP_CBAJ_G0015885.1 mouse_genomes_project 1 80249420 80284548 + MGP_CBAJ_P0020187 Arpc2 protein_coding protein_coding MGP_CBAJ_T0020188.1 MGP_CBAJ_G0015885.1 mouse_genomes_project 1 80249440 80284330 + MGP_CBAJ_P0020188 Arpc2 protein_coding protein_coding MGP_CBAJ_T0020189.1 MGP_CBAJ_G0015885.1 mouse_genomes_project 1 80249473 80284331 + MGP_CBAJ_P0020189 Arpc2 protein_coding protein_coding MGP_CBAJ_T0098240.1 MGP_CBAJ_G0036512.1 mouse_genomes_project 1 149196086 149200680 - Gm28277 sense_intronic sense_intronic MGP_CBAJ_T0021331.1 MGP_CBAJ_G0016116.1 mouse_genomes_project 1 117202820 117222933 + MGP_CBAJ_P0021331 Serpinb13 protein_coding protein_coding MGP_CBAJ_T0021332.1 MGP_CBAJ_G0016116.1 mouse_genomes_project 1 117202830 117222636 + MGP_CBAJ_P0021332 Serpinb13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0101239.1 MGP_CBAJ_G0039382.1 mouse_genomes_project 1 20290548 20309369 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101240.1 MGP_CBAJ_G0039382.1 mouse_genomes_project 1 20296681 20309202 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101241.1 MGP_CBAJ_G0039382.1 mouse_genomes_project 1 20301085 20309304 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0011826.1 MGP_CBAJ_G0009938.1 mouse_genomes_project 1 33780848 33781599 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011773.1 MGP_CBAJ_G0009885.1 mouse_genomes_project 1 15241011 15241429 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0021123.1 MGP_CBAJ_G0016073.1 mouse_genomes_project 1 101409908 101502100 - MGP_CBAJ_P0021123 Kif1a protein_coding protein_coding MGP_CBAJ_T0021124.1 MGP_CBAJ_G0016073.1 mouse_genomes_project 1 101412193 101502109 - MGP_CBAJ_P0021124 Kif1a protein_coding protein_coding MGP_CBAJ_T0021125.1 MGP_CBAJ_G0016073.1 mouse_genomes_project 1 101412382 101502229 - MGP_CBAJ_P0021125 Kif1a protein_coding protein_coding MGP_CBAJ_T0021126.1 MGP_CBAJ_G0016073.1 mouse_genomes_project 1 101412722 101502125 - MGP_CBAJ_P0021126 Kif1a protein_coding protein_coding MGP_CBAJ_T0021127.1 MGP_CBAJ_G0016073.1 mouse_genomes_project 1 101412899 101479319 - MGP_CBAJ_P0021127 Kif1a protein_coding protein_coding MGP_CBAJ_T0021128.1 MGP_CBAJ_G0016073.1 mouse_genomes_project 1 101416763 101419151 - MGP_CBAJ_P0021128 Kif1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0021129.1 MGP_CBAJ_G0016073.1 mouse_genomes_project 1 101417935 101421648 - Kif1a protein_coding retained_intron MGP_CBAJ_T0021130.1 MGP_CBAJ_G0016073.1 mouse_genomes_project 1 101433477 101502124 - Kif1a protein_coding processed_transcript MGP_CBAJ_T0021131.1 MGP_CBAJ_G0016073.1 mouse_genomes_project 1 101436932 101448513 - MGP_CBAJ_P0021131 Kif1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0021132.1 MGP_CBAJ_G0016073.1 mouse_genomes_project 1 101463029 101465656 - Kif1a protein_coding processed_transcript MGP_CBAJ_T0021133.1 MGP_CBAJ_G0016073.1 mouse_genomes_project 1 101474621 101502112 - MGP_CBAJ_P0021133 Kif1a protein_coding protein_coding MGP_CBAJ_T0009372.1 MGP_CBAJ_G0007510.1 mouse_genomes_project 1 57312525 57312597 + Mir7681 miRNA miRNA MGP_CBAJ_T0000436.1 MGP_CBAJ_G0000378.1 mouse_genomes_project 1 57228267 57229724 + TEC TEC MGP_CBAJ_T0009367.1 MGP_CBAJ_G0007505.1 mouse_genomes_project 1 45980604 45980714 - Gm24180 miRNA miRNA MGP_CBAJ_T0023063.1 MGP_CBAJ_G0016478.1 mouse_genomes_project 1 189122458 189133674 + MGP_CBAJ_P0023063 Fcgr4 protein_coding protein_coding MGP_CBAJ_T0101489.1 MGP_CBAJ_G0039521.1 mouse_genomes_project 1 154205499 154257565 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0022461.1 MGP_CBAJ_G0016357.1 mouse_genomes_project 1 172087464 172090859 - Qsox1 protein_coding retained_intron MGP_CBAJ_T0022462.1 MGP_CBAJ_G0016357.1 mouse_genomes_project 1 172089593 172124431 - MGP_CBAJ_P0022462 Qsox1 protein_coding protein_coding MGP_CBAJ_T0022463.1 MGP_CBAJ_G0016357.1 mouse_genomes_project 1 172089594 172124393 - MGP_CBAJ_P0022463 Qsox1 protein_coding protein_coding MGP_CBAJ_T0022464.1 MGP_CBAJ_G0016357.1 mouse_genomes_project 1 172089597 172124386 - MGP_CBAJ_P0022464 Qsox1 protein_coding protein_coding MGP_CBAJ_T0022465.1 MGP_CBAJ_G0016357.1 mouse_genomes_project 1 172091354 172093430 - Qsox1 protein_coding processed_transcript MGP_CBAJ_T0022466.1 MGP_CBAJ_G0016357.1 mouse_genomes_project 1 172105587 172124362 - Qsox1 protein_coding retained_intron MGP_CBAJ_T0022467.1 MGP_CBAJ_G0016357.1 mouse_genomes_project 1 172105761 172106836 - Qsox1 protein_coding retained_intron MGP_CBAJ_T0022468.1 MGP_CBAJ_G0016357.1 mouse_genomes_project 1 172112887 172124380 - Qsox1 protein_coding retained_intron MGP_CBAJ_T0005746.1 MGP_CBAJ_G0004813.1 mouse_genomes_project 1 98554630 98555741 - Gm28722 lincRNA lincRNA MGP_CBAJ_T0022935.1 MGP_CBAJ_G0016443.1 mouse_genomes_project 1 183800165 183836422 - MGP_CBAJ_P0022935 Mael protein_coding protein_coding MGP_CBAJ_T0022936.1 MGP_CBAJ_G0016443.1 mouse_genomes_project 1 183800349 183836419 - MGP_CBAJ_P0022936 Mael protein_coding protein_coding MGP_CBAJ_T0022877.1 MGP_CBAJ_G0016435.1 mouse_genomes_project 1 182986324 183069860 + MGP_CBAJ_P0022877 Adcy10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022878.1 MGP_CBAJ_G0016435.1 mouse_genomes_project 1 182986324 183069255 + MGP_CBAJ_P0022878 Adcy10 protein_coding protein_coding MGP_CBAJ_T0022879.1 MGP_CBAJ_G0016435.1 mouse_genomes_project 1 182986324 183070230 + MGP_CBAJ_P0022879 Adcy10 protein_coding protein_coding MGP_CBAJ_T0022880.1 MGP_CBAJ_G0016435.1 mouse_genomes_project 1 182986330 183069254 + MGP_CBAJ_P0022880 Adcy10 protein_coding protein_coding MGP_CBAJ_T0022881.1 MGP_CBAJ_G0016435.1 mouse_genomes_project 1 182986334 182990682 + Adcy10 protein_coding processed_transcript MGP_CBAJ_T0022882.1 MGP_CBAJ_G0016435.1 mouse_genomes_project 1 182986352 183069252 + MGP_CBAJ_P0022882 Adcy10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022883.1 MGP_CBAJ_G0016435.1 mouse_genomes_project 1 183005128 183061211 + MGP_CBAJ_P0022883 Adcy10 protein_coding protein_coding MGP_CBAJ_T0022884.1 MGP_CBAJ_G0016435.1 mouse_genomes_project 1 183011022 183036792 + Adcy10 protein_coding retained_intron MGP_CBAJ_T0022885.1 MGP_CBAJ_G0016435.1 mouse_genomes_project 1 183017456 183019268 + Adcy10 protein_coding retained_intron MGP_CBAJ_T0022886.1 MGP_CBAJ_G0016435.1 mouse_genomes_project 1 183036615 183044789 + Adcy10 protein_coding processed_transcript MGP_CBAJ_T0005694.1 MGP_CBAJ_G0004773.1 mouse_genomes_project 1 78005815 78038470 + D230017M19Rik lincRNA lincRNA MGP_CBAJ_T0005695.1 MGP_CBAJ_G0004773.1 mouse_genomes_project 1 78015329 78047314 + D230017M19Rik lincRNA lincRNA MGP_CBAJ_T0005696.1 MGP_CBAJ_G0004773.1 mouse_genomes_project 1 78037026 78039512 + D230017M19Rik lincRNA lincRNA MGP_CBAJ_T0098528.1 MGP_CBAJ_G0036783.1 mouse_genomes_project 1 55577466 55577575 - Gm23460 snRNA snRNA MGP_CBAJ_T0002714.1 MGP_CBAJ_G0002581.1 mouse_genomes_project 1 39152913 39160993 + Gm26805 antisense antisense MGP_CBAJ_T0000373.1 MGP_CBAJ_G0000316.1 mouse_genomes_project 1 24828461 24829492 - TEC TEC MGP_CBAJ_T0000406.1 MGP_CBAJ_G0000348.1 mouse_genomes_project 1 34810359 34812005 + TEC TEC MGP_CBAJ_T0099809.1 MGP_CBAJ_G0038064.1 mouse_genomes_project 1 178014840 178014920 + Gm26224 snoRNA snoRNA MGP_CBAJ_T0021966.1 MGP_CBAJ_G0016260.1 mouse_genomes_project 1 148895016 148905374 - MGP_CBAJ_P0021966 Gpr37l1 protein_coding protein_coding MGP_CBAJ_T0012144.1 MGP_CBAJ_G0010256.1 mouse_genomes_project 1 166909072 166913634 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000426.1 MGP_CBAJ_G0000368.1 mouse_genomes_project 1 44591390 44592066 + TEC TEC MGP_CBAJ_T0021237.1 MGP_CBAJ_G0016097.1 mouse_genomes_project 1 106100658 106197874 - MGP_CBAJ_P0021237 Slco6c1 protein_coding protein_coding MGP_CBAJ_T0021238.1 MGP_CBAJ_G0016097.1 mouse_genomes_project 1 106101134 106197969 - MGP_CBAJ_P0021238 Slco6c1 protein_coding protein_coding MGP_CBAJ_T0018969.1 MGP_CBAJ_G0015655.1 mouse_genomes_project 1 35424012 35444282 - MGP_CBAJ_P0018969 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012097.1 MGP_CBAJ_G0010209.1 mouse_genomes_project 1 141321752 141322060 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0021344.1 MGP_CBAJ_G0016123.1 mouse_genomes_project 1 117904873 117925401 + MGP_CBAJ_P0021344 Serpinb8 protein_coding protein_coding MGP_CBAJ_T0021345.1 MGP_CBAJ_G0016123.1 mouse_genomes_project 1 117904873 117926874 + MGP_CBAJ_P0021345 Serpinb8 protein_coding protein_coding MGP_CBAJ_T0021346.1 MGP_CBAJ_G0016123.1 mouse_genomes_project 1 117904913 117922648 + Serpinb8 protein_coding retained_intron MGP_CBAJ_T0021347.1 MGP_CBAJ_G0016123.1 mouse_genomes_project 1 117922377 117923823 + MGP_CBAJ_P0021347 Serpinb8 protein_coding protein_coding MGP_CBAJ_T0099766.1 MGP_CBAJ_G0038021.1 mouse_genomes_project 1 67856932 67856967 + Gm26457 snoRNA snoRNA MGP_CBAJ_T0101467.1 MGP_CBAJ_G0039499.1 mouse_genomes_project 1 100906381 100906564 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0005575.1 MGP_CBAJ_G0004687.1 mouse_genomes_project 1 21123347 21126028 + Gm26580 lincRNA lincRNA MGP_CBAJ_T0022992.1 MGP_CBAJ_G0016459.1 mouse_genomes_project 1 187392386 187433241 - MGP_CBAJ_P0022992 Nuf2 protein_coding protein_coding MGP_CBAJ_T0022993.1 MGP_CBAJ_G0016459.1 mouse_genomes_project 1 187392763 187433205 - MGP_CBAJ_P0022993 Nuf2 protein_coding protein_coding MGP_CBAJ_T0022994.1 MGP_CBAJ_G0016459.1 mouse_genomes_project 1 187400545 187422244 - MGP_CBAJ_P0022994 Nuf2 protein_coding protein_coding MGP_CBAJ_T0022995.1 MGP_CBAJ_G0016459.1 mouse_genomes_project 1 187406903 187433188 - MGP_CBAJ_P0022995 Nuf2 protein_coding protein_coding MGP_CBAJ_T0022996.1 MGP_CBAJ_G0016459.1 mouse_genomes_project 1 187424882 187433195 - Nuf2 protein_coding retained_intron MGP_CBAJ_T0011112.1 MGP_CBAJ_G0009250.1 mouse_genomes_project 1 7956174 7956414 + Gm26348 misc_RNA misc_RNA MGP_CBAJ_T0020183.1 MGP_CBAJ_G0015883.1 mouse_genomes_project 1 80155674 80162468 + MGP_CBAJ_P0020183 Cxcr2 protein_coding protein_coding MGP_CBAJ_T0099817.1 MGP_CBAJ_G0038072.1 mouse_genomes_project 1 178017527 178017604 + Snord47 snoRNA snoRNA MGP_CBAJ_T0000542.1 MGP_CBAJ_G0000484.1 mouse_genomes_project 1 109193132 109195841 + TEC TEC MGP_CBAJ_T0020019.1 MGP_CBAJ_G0015853.1 mouse_genomes_project 1 70964442 70968477 + MGP_CBAJ_P0020019 protein_coding protein_coding MGP_CBAJ_T0020020.1 MGP_CBAJ_G0015853.1 mouse_genomes_project 1 70964460 70968476 + MGP_CBAJ_P0020020 protein_coding protein_coding MGP_CBAJ_T0002736.1 MGP_CBAJ_G0002599.1 mouse_genomes_project 1 58215594 58282566 + 4930444A19Rik antisense antisense MGP_CBAJ_T0002737.1 MGP_CBAJ_G0002599.1 mouse_genomes_project 1 58227107 58317239 + 4930444A19Rik antisense antisense MGP_CBAJ_T0005710.1 MGP_CBAJ_G0004783.1 mouse_genomes_project 1 82698829 82711140 + Gm17751 lincRNA lincRNA MGP_CBAJ_T0005711.1 MGP_CBAJ_G0004783.1 mouse_genomes_project 1 82698829 82711724 + Gm17751 lincRNA lincRNA MGP_CBAJ_T0022964.1 MGP_CBAJ_G0016451.1 mouse_genomes_project 1 184896627 184966279 - MGP_CBAJ_P0022964 Uck2 protein_coding protein_coding MGP_CBAJ_T0022965.1 MGP_CBAJ_G0016451.1 mouse_genomes_project 1 184899585 184965843 - MGP_CBAJ_P0022965 Uck2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022966.1 MGP_CBAJ_G0016451.1 mouse_genomes_project 1 184899971 184914083 - MGP_CBAJ_P0022966 Uck2 protein_coding protein_coding MGP_CBAJ_T0022967.1 MGP_CBAJ_G0016451.1 mouse_genomes_project 1 184900076 184920467 - MGP_CBAJ_P0022967 Uck2 protein_coding protein_coding MGP_CBAJ_T0022968.1 MGP_CBAJ_G0016451.1 mouse_genomes_project 1 184903583 184965560 - MGP_CBAJ_P0022968 Uck2 protein_coding protein_coding MGP_CBAJ_T0022969.1 MGP_CBAJ_G0016451.1 mouse_genomes_project 1 184911934 184965837 - MGP_CBAJ_P0022969 Uck2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022970.1 MGP_CBAJ_G0016451.1 mouse_genomes_project 1 184914725 184965666 - Uck2 protein_coding processed_transcript MGP_CBAJ_T0022155.1 MGP_CBAJ_G0016297.1 mouse_genomes_project 1 153776480 153789518 - MGP_CBAJ_P0022155 protein_coding protein_coding MGP_CBAJ_T0022156.1 MGP_CBAJ_G0016297.1 mouse_genomes_project 1 153780082 153782975 - MGP_CBAJ_P0022156 protein_coding protein_coding MGP_CBAJ_T0000681.1 MGP_CBAJ_G0000621.1 mouse_genomes_project 1 177658133 177658560 - TEC TEC MGP_CBAJ_T0016827.1 MGP_CBAJ_G0014862.1 mouse_genomes_project 1 187888128 187890240 - Gm15852 processed_transcript processed_transcript MGP_CBAJ_T0022428.1 MGP_CBAJ_G0016352.1 mouse_genomes_project 1 171423650 171473261 + MGP_CBAJ_P0022428 Stx6 protein_coding protein_coding MGP_CBAJ_T0022429.1 MGP_CBAJ_G0016352.1 mouse_genomes_project 1 171423654 171469546 + MGP_CBAJ_P0022429 Stx6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022430.1 MGP_CBAJ_G0016352.1 mouse_genomes_project 1 171423683 171465857 + MGP_CBAJ_P0022430 Stx6 protein_coding protein_coding MGP_CBAJ_T0022431.1 MGP_CBAJ_G0016352.1 mouse_genomes_project 1 171423706 171459123 + Stx6 protein_coding processed_transcript MGP_CBAJ_T0022432.1 MGP_CBAJ_G0016352.1 mouse_genomes_project 1 171423734 171445092 + Stx6 protein_coding retained_intron MGP_CBAJ_T0022433.1 MGP_CBAJ_G0016352.1 mouse_genomes_project 1 171451867 171455948 + Stx6 protein_coding retained_intron MGP_CBAJ_T0022434.1 MGP_CBAJ_G0016352.1 mouse_genomes_project 1 171454991 171469624 + Stx6 protein_coding retained_intron MGP_CBAJ_T0022435.1 MGP_CBAJ_G0016352.1 mouse_genomes_project 1 171455329 171475858 + MGP_CBAJ_P0022435 Stx6 protein_coding protein_coding MGP_CBAJ_T0022436.1 MGP_CBAJ_G0016352.1 mouse_genomes_project 1 171455435 171461364 + Stx6 protein_coding retained_intron MGP_CBAJ_T0022437.1 MGP_CBAJ_G0016352.1 mouse_genomes_project 1 171462622 171469849 + Stx6 protein_coding processed_transcript MGP_CBAJ_T0000480.1 MGP_CBAJ_G0000422.1 mouse_genomes_project 1 76154625 76160462 - TEC TEC MGP_CBAJ_T0016781.1 MGP_CBAJ_G0014851.1 mouse_genomes_project 1 149980491 149985473 - Gm15850 processed_transcript processed_transcript MGP_CBAJ_T0016782.1 MGP_CBAJ_G0014851.1 mouse_genomes_project 1 149982032 149985461 - Gm15850 processed_transcript processed_transcript MGP_CBAJ_T0016783.1 MGP_CBAJ_G0014851.1 mouse_genomes_project 1 149982032 149985461 - Gm15850 processed_transcript processed_transcript MGP_CBAJ_T0016784.1 MGP_CBAJ_G0014851.1 mouse_genomes_project 1 149982032 149985461 - Gm15850 processed_transcript processed_transcript MGP_CBAJ_T0011879.1 MGP_CBAJ_G0009991.1 mouse_genomes_project 1 50984327 50985313 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000564.1 MGP_CBAJ_G0000506.1 mouse_genomes_project 1 135609037 135612045 - TEC TEC MGP_CBAJ_T0005860.1 MGP_CBAJ_G0004907.1 mouse_genomes_project 1 170438654 170453320 + 4930532M18Rik lincRNA lincRNA MGP_CBAJ_T0005861.1 MGP_CBAJ_G0004907.1 mouse_genomes_project 1 170439976 170453141 + 4930532M18Rik lincRNA lincRNA MGP_CBAJ_T0021227.1 MGP_CBAJ_G0016092.1 mouse_genomes_project 1 102581544 102586509 + MGP_CBAJ_P0021227 Neu4 protein_coding protein_coding MGP_CBAJ_T0021228.1 MGP_CBAJ_G0016092.1 mouse_genomes_project 1 102581586 102589426 + MGP_CBAJ_P0021228 Neu4 protein_coding protein_coding MGP_CBAJ_T0005798.1 MGP_CBAJ_G0004856.1 mouse_genomes_project 1 132825266 132834686 - Gm29348 lincRNA lincRNA MGP_CBAJ_T0011744.1 MGP_CBAJ_G0009856.1 mouse_genomes_project 1 5294131 5295108 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021424.1 MGP_CBAJ_G0016139.1 mouse_genomes_project 1 131356266 131467676 - MGP_CBAJ_P0021424 Epb41l5 protein_coding protein_coding MGP_CBAJ_T0021425.1 MGP_CBAJ_G0016139.1 mouse_genomes_project 1 131359358 131467674 - MGP_CBAJ_P0021425 Epb41l5 protein_coding protein_coding MGP_CBAJ_T0021426.1 MGP_CBAJ_G0016139.1 mouse_genomes_project 1 131365462 131415748 - Epb41l5 protein_coding retained_intron MGP_CBAJ_T0021427.1 MGP_CBAJ_G0016139.1 mouse_genomes_project 1 131393583 131395871 - Epb41l5 protein_coding retained_intron MGP_CBAJ_T0021428.1 MGP_CBAJ_G0016139.1 mouse_genomes_project 1 131406183 131467740 - MGP_CBAJ_P0021428 Epb41l5 protein_coding protein_coding MGP_CBAJ_T0021429.1 MGP_CBAJ_G0016139.1 mouse_genomes_project 1 131410516 131467357 - MGP_CBAJ_P0021429 Epb41l5 protein_coding protein_coding MGP_CBAJ_T0021430.1 MGP_CBAJ_G0016139.1 mouse_genomes_project 1 131410884 131414683 - Epb41l5 protein_coding retained_intron MGP_CBAJ_T0021431.1 MGP_CBAJ_G0016139.1 mouse_genomes_project 1 131433130 131449487 - Epb41l5 protein_coding retained_intron MGP_CBAJ_T0021432.1 MGP_CBAJ_G0016139.1 mouse_genomes_project 1 131437424 131467364 - MGP_CBAJ_P0021432 Epb41l5 protein_coding protein_coding MGP_CBAJ_T0023802.1 MGP_CBAJ_G0016658.1 mouse_genomes_project 1 207674469 207705935 + Gpatch2 protein_coding processed_transcript MGP_CBAJ_T0023803.1 MGP_CBAJ_G0016658.1 mouse_genomes_project 1 207674472 207829146 + MGP_CBAJ_P0023803 Gpatch2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023804.1 MGP_CBAJ_G0016658.1 mouse_genomes_project 1 207674483 207831208 + MGP_CBAJ_P0023804 Gpatch2 protein_coding protein_coding MGP_CBAJ_T0023805.1 MGP_CBAJ_G0016658.1 mouse_genomes_project 1 207674499 207780484 + Gpatch2 protein_coding retained_intron MGP_CBAJ_T0023806.1 MGP_CBAJ_G0016658.1 mouse_genomes_project 1 207674505 207704521 + MGP_CBAJ_P0023806 Gpatch2 protein_coding protein_coding MGP_CBAJ_T0023807.1 MGP_CBAJ_G0016658.1 mouse_genomes_project 1 207674507 207704005 + MGP_CBAJ_P0023807 Gpatch2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023808.1 MGP_CBAJ_G0016658.1 mouse_genomes_project 1 207674585 207831205 + MGP_CBAJ_P0023808 Gpatch2 protein_coding protein_coding MGP_CBAJ_T0023809.1 MGP_CBAJ_G0016658.1 mouse_genomes_project 1 207674704 207830229 + MGP_CBAJ_P0023809 Gpatch2 protein_coding protein_coding MGP_CBAJ_T0002906.1 MGP_CBAJ_G0002729.1 mouse_genomes_project 1 205692925 205707381 - 9630028B13Rik antisense antisense MGP_CBAJ_T0005701.1 MGP_CBAJ_G0004777.1 mouse_genomes_project 1 79477668 79481191 - C530043A13Rik lincRNA lincRNA MGP_CBAJ_T0005702.1 MGP_CBAJ_G0004777.1 mouse_genomes_project 1 79477670 79481024 - C530043A13Rik lincRNA lincRNA MGP_CBAJ_T0005703.1 MGP_CBAJ_G0004777.1 mouse_genomes_project 1 79478791 79485370 - C530043A13Rik lincRNA lincRNA MGP_CBAJ_T0002677.1 MGP_CBAJ_G0002557.1 mouse_genomes_project 1 3613843 3619421 - 4732440D04Rik antisense antisense MGP_CBAJ_T0002678.1 MGP_CBAJ_G0002557.1 mouse_genomes_project 1 3617420 3618718 - 4732440D04Rik antisense antisense MGP_CBAJ_T0002679.1 MGP_CBAJ_G0002557.1 mouse_genomes_project 1 3618739 3619420 - 4732440D04Rik antisense antisense MGP_CBAJ_T0023681.1 MGP_CBAJ_G0016629.1 mouse_genomes_project 1 202368242 202436050 + MGP_CBAJ_P0023681 Trp53bp2 protein_coding protein_coding MGP_CBAJ_T0023682.1 MGP_CBAJ_G0016629.1 mouse_genomes_project 1 202413079 202435400 + Trp53bp2 protein_coding retained_intron MGP_CBAJ_T0023683.1 MGP_CBAJ_G0016629.1 mouse_genomes_project 1 202415755 202419498 + MGP_CBAJ_P0023683 Trp53bp2 protein_coding protein_coding MGP_CBAJ_T0002749.1 MGP_CBAJ_G0002608.1 mouse_genomes_project 1 66305934 66395405 - Pard3bos1 antisense antisense MGP_CBAJ_T0002750.1 MGP_CBAJ_G0002608.1 mouse_genomes_project 1 66327489 66395483 - Pard3bos1 antisense antisense MGP_CBAJ_T0023963.1 MGP_CBAJ_G0016688.1 mouse_genomes_project 1 213203339 213568477 + MGP_CBAJ_P0023963 Kcnh1 protein_coding protein_coding MGP_CBAJ_T0023964.1 MGP_CBAJ_G0016688.1 mouse_genomes_project 1 213203339 213568477 + MGP_CBAJ_P0023964 Kcnh1 protein_coding protein_coding MGP_CBAJ_T0023965.1 MGP_CBAJ_G0016688.1 mouse_genomes_project 1 213484780 213568477 + MGP_CBAJ_P0023965 Kcnh1 protein_coding protein_coding MGP_CBAJ_T0021659.1 MGP_CBAJ_G0016192.1 mouse_genomes_project 1 144410109 144433453 - MGP_CBAJ_P0021659 Rassf5 protein_coding protein_coding MGP_CBAJ_T0021660.1 MGP_CBAJ_G0016192.1 mouse_genomes_project 1 144412224 144480428 - MGP_CBAJ_P0021660 Rassf5 protein_coding protein_coding MGP_CBAJ_T0021661.1 MGP_CBAJ_G0016192.1 mouse_genomes_project 1 144443994 144480556 - Rassf5 protein_coding processed_transcript MGP_CBAJ_T0020398.1 MGP_CBAJ_G0015921.1 mouse_genomes_project 1 81287825 81292892 - MGP_CBAJ_P0020398 Tuba4a protein_coding protein_coding MGP_CBAJ_T0020399.1 MGP_CBAJ_G0015921.1 mouse_genomes_project 1 81288569 81292222 - MGP_CBAJ_P0020399 Tuba4a protein_coding protein_coding MGP_CBAJ_T0020400.1 MGP_CBAJ_G0015921.1 mouse_genomes_project 1 81289209 81291032 - MGP_CBAJ_P0020400 Tuba4a protein_coding protein_coding MGP_CBAJ_T0020401.1 MGP_CBAJ_G0015921.1 mouse_genomes_project 1 81289553 81291012 - MGP_CBAJ_P0020401 Tuba4a protein_coding protein_coding MGP_CBAJ_T0020402.1 MGP_CBAJ_G0015921.1 mouse_genomes_project 1 81290032 81292841 - Tuba4a protein_coding retained_intron MGP_CBAJ_T0020403.1 MGP_CBAJ_G0015921.1 mouse_genomes_project 1 81290454 81293463 - MGP_CBAJ_P0020403 Tuba4a protein_coding protein_coding MGP_CBAJ_T0020404.1 MGP_CBAJ_G0015921.1 mouse_genomes_project 1 81290486 81292486 - MGP_CBAJ_P0020404 Tuba4a protein_coding protein_coding MGP_CBAJ_T0020405.1 MGP_CBAJ_G0015921.1 mouse_genomes_project 1 81290510 81292486 - MGP_CBAJ_P0020405 Tuba4a protein_coding protein_coding MGP_CBAJ_T0011786.1 MGP_CBAJ_G0009898.1 mouse_genomes_project 1 19750462 19751648 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011113.1 MGP_CBAJ_G0009251.1 mouse_genomes_project 1 12108116 12108424 + Gm25491 misc_RNA misc_RNA MGP_CBAJ_T0002853.1 MGP_CBAJ_G0002686.1 mouse_genomes_project 1 174058759 174072551 - Gm15486 antisense antisense MGP_CBAJ_T0018764.1 MGP_CBAJ_G0015609.1 mouse_genomes_project 1 16867290 16868261 - MGP_CBAJ_P0018764 Defb18 protein_coding protein_coding MGP_CBAJ_T0020607.1 MGP_CBAJ_G0015958.1 mouse_genomes_project 1 89335540 89493093 - MGP_CBAJ_P0020607 Col4a4 protein_coding protein_coding MGP_CBAJ_T0020608.1 MGP_CBAJ_G0015958.1 mouse_genomes_project 1 89434580 89493036 - Col4a4 protein_coding retained_intron MGP_CBAJ_T0098515.1 MGP_CBAJ_G0036770.1 mouse_genomes_project 1 19336899 19337001 - Gm24162 snRNA snRNA MGP_CBAJ_T0012214.1 MGP_CBAJ_G0010326.1 mouse_genomes_project 1 203729712 203730063 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0020978.1 MGP_CBAJ_G0016042.1 mouse_genomes_project 1 99150798 99272822 + MGP_CBAJ_P0020978 Lrrfip1 protein_coding protein_coding MGP_CBAJ_T0020979.1 MGP_CBAJ_G0016042.1 mouse_genomes_project 1 99150838 99286963 + MGP_CBAJ_P0020979 Lrrfip1 protein_coding protein_coding MGP_CBAJ_T0020980.1 MGP_CBAJ_G0016042.1 mouse_genomes_project 1 99150840 99293389 + MGP_CBAJ_P0020980 Lrrfip1 protein_coding protein_coding MGP_CBAJ_T0020981.1 MGP_CBAJ_G0016042.1 mouse_genomes_project 1 99212017 99293393 + MGP_CBAJ_P0020981 Lrrfip1 protein_coding protein_coding MGP_CBAJ_T0020982.1 MGP_CBAJ_G0016042.1 mouse_genomes_project 1 99212027 99281739 + MGP_CBAJ_P0020982 Lrrfip1 protein_coding protein_coding MGP_CBAJ_T0020983.1 MGP_CBAJ_G0016042.1 mouse_genomes_project 1 99212080 99293367 + MGP_CBAJ_P0020983 Lrrfip1 protein_coding protein_coding MGP_CBAJ_T0020984.1 MGP_CBAJ_G0016042.1 mouse_genomes_project 1 99212080 99264773 + MGP_CBAJ_P0020984 Lrrfip1 protein_coding protein_coding MGP_CBAJ_T0020985.1 MGP_CBAJ_G0016042.1 mouse_genomes_project 1 99212159 99292736 + MGP_CBAJ_P0020985 Lrrfip1 protein_coding protein_coding MGP_CBAJ_T0020986.1 MGP_CBAJ_G0016042.1 mouse_genomes_project 1 99275391 99281345 + Lrrfip1 protein_coding processed_transcript MGP_CBAJ_T0020987.1 MGP_CBAJ_G0016042.1 mouse_genomes_project 1 99275410 99279276 + Lrrfip1 protein_coding processed_transcript MGP_CBAJ_T0020988.1 MGP_CBAJ_G0016042.1 mouse_genomes_project 1 99284383 99286949 + Lrrfip1 protein_coding processed_transcript MGP_CBAJ_T0020989.1 MGP_CBAJ_G0016042.1 mouse_genomes_project 1 99289803 99292627 + Lrrfip1 protein_coding retained_intron MGP_CBAJ_T0020683.1 MGP_CBAJ_G0015971.1 mouse_genomes_project 1 92018391 92093477 + MGP_CBAJ_P0020683 Fbxo36 protein_coding protein_coding MGP_CBAJ_T0020684.1 MGP_CBAJ_G0015971.1 mouse_genomes_project 1 92018403 92093477 + Fbxo36 protein_coding processed_transcript MGP_CBAJ_T0020685.1 MGP_CBAJ_G0015971.1 mouse_genomes_project 1 92048668 92093477 + Fbxo36 protein_coding processed_transcript MGP_CBAJ_T0020686.1 MGP_CBAJ_G0015971.1 mouse_genomes_project 1 92052741 92093477 + Fbxo36 protein_coding processed_transcript MGP_CBAJ_T0000391.1 MGP_CBAJ_G0000334.1 mouse_genomes_project 1 28557678 28559192 + TEC TEC MGP_CBAJ_T0023212.1 MGP_CBAJ_G0016509.1 mouse_genomes_project 1 190117859 190147061 + Cd84 protein_coding processed_transcript MGP_CBAJ_T0023213.1 MGP_CBAJ_G0016509.1 mouse_genomes_project 1 190118701 190133230 + MGP_CBAJ_P0023213 Cd84 protein_coding protein_coding MGP_CBAJ_T0023214.1 MGP_CBAJ_G0016509.1 mouse_genomes_project 1 190118769 190153801 + MGP_CBAJ_P0023214 Cd84 protein_coding protein_coding MGP_CBAJ_T0000574.1 MGP_CBAJ_G0000516.1 mouse_genomes_project 1 138836153 138837168 - TEC TEC MGP_CBAJ_T0021962.1 MGP_CBAJ_G0016259.1 mouse_genomes_project 1 148872609 148888642 + MGP_CBAJ_P0021962 Arl8a protein_coding protein_coding MGP_CBAJ_T0021963.1 MGP_CBAJ_G0016259.1 mouse_genomes_project 1 148873454 148888642 + MGP_CBAJ_P0021963 Arl8a protein_coding protein_coding MGP_CBAJ_T0021964.1 MGP_CBAJ_G0016259.1 mouse_genomes_project 1 148877666 148883691 + Arl8a protein_coding retained_intron MGP_CBAJ_T0021965.1 MGP_CBAJ_G0016259.1 mouse_genomes_project 1 148883577 148887691 + Arl8a protein_coding retained_intron MGP_CBAJ_T0002839.1 MGP_CBAJ_G0002675.1 mouse_genomes_project 1 161966028 161999942 - Gm15584 antisense antisense MGP_CBAJ_T0011901.1 MGP_CBAJ_G0010013.1 mouse_genomes_project 1 56598806 56599379 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012185.1 MGP_CBAJ_G0010297.1 mouse_genomes_project 1 184859109 184859518 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000494.1 MGP_CBAJ_G0000436.1 mouse_genomes_project 1 86894581 86895735 - TEC TEC MGP_CBAJ_T0021041.1 MGP_CBAJ_G0016052.1 mouse_genomes_project 1 99607365 99652214 - MGP_CBAJ_P0021041 Per2 protein_coding protein_coding MGP_CBAJ_T0021042.1 MGP_CBAJ_G0016052.1 mouse_genomes_project 1 99640616 99642760 - Per2 protein_coding processed_transcript MGP_CBAJ_T0021201.1 MGP_CBAJ_G0016087.1 mouse_genomes_project 1 102175103 102232720 - MGP_CBAJ_P0021201 Thap4 protein_coding protein_coding MGP_CBAJ_T0021202.1 MGP_CBAJ_G0016087.1 mouse_genomes_project 1 102178589 102204561 - MGP_CBAJ_P0021202 Thap4 protein_coding protein_coding MGP_CBAJ_T0021203.1 MGP_CBAJ_G0016087.1 mouse_genomes_project 1 102178592 102232804 - MGP_CBAJ_P0021203 Thap4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021204.1 MGP_CBAJ_G0016087.1 mouse_genomes_project 1 102178593 102187978 - MGP_CBAJ_P0021204 Thap4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021205.1 MGP_CBAJ_G0016087.1 mouse_genomes_project 1 102187775 102225482 - MGP_CBAJ_P0021205 Thap4 protein_coding protein_coding MGP_CBAJ_T0021206.1 MGP_CBAJ_G0016087.1 mouse_genomes_project 1 102197261 102232590 - Thap4 protein_coding retained_intron MGP_CBAJ_T0099815.1 MGP_CBAJ_G0038070.1 mouse_genomes_project 1 178017040 178017121 + Snord80 snoRNA snoRNA MGP_CBAJ_T0020295.1 MGP_CBAJ_G0015902.1 mouse_genomes_project 1 80808868 80833185 + MGP_CBAJ_P0020295 Cyp27a1 protein_coding protein_coding MGP_CBAJ_T0020296.1 MGP_CBAJ_G0015902.1 mouse_genomes_project 1 80830643 80832009 + Cyp27a1 protein_coding retained_intron MGP_CBAJ_T0020297.1 MGP_CBAJ_G0015902.1 mouse_genomes_project 1 80832101 80833116 + Cyp27a1 protein_coding retained_intron MGP_CBAJ_T0002872.1 MGP_CBAJ_G0002700.1 mouse_genomes_project 1 182994928 182996305 - Gm38325 antisense antisense MGP_CBAJ_T0019555.1 MGP_CBAJ_G0015767.1 mouse_genomes_project 1 57887451 57927125 - MGP_CBAJ_P0019555 Gtf3c3 protein_coding protein_coding MGP_CBAJ_T0019556.1 MGP_CBAJ_G0015767.1 mouse_genomes_project 1 57905590 57909496 - Gtf3c3 protein_coding retained_intron MGP_CBAJ_T0019557.1 MGP_CBAJ_G0015767.1 mouse_genomes_project 1 57912743 57914351 - Gtf3c3 protein_coding retained_intron MGP_CBAJ_T0097743.1 MGP_CBAJ_G0036016.1 mouse_genomes_project 1 131337282 131339082 + pseudogene pseudogene MGP_CBAJ_T0000601.1 MGP_CBAJ_G0000542.1 mouse_genomes_project 1 147370169 147371849 + TEC TEC MGP_CBAJ_T0005949.1 MGP_CBAJ_G0004974.1 mouse_genomes_project 1 205616051 205619514 - 4930532G15Rik lincRNA lincRNA MGP_CBAJ_T0005950.1 MGP_CBAJ_G0004974.1 mouse_genomes_project 1 205618057 205619514 - 4930532G15Rik lincRNA lincRNA MGP_CBAJ_T0011829.1 MGP_CBAJ_G0009941.1 mouse_genomes_project 1 34099406 34101662 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011874.1 MGP_CBAJ_G0009986.1 mouse_genomes_project 1 48307569 48307833 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000335.1 MGP_CBAJ_G0000280.1 mouse_genomes_project 1 6136536 6140653 - TEC TEC MGP_CBAJ_T0005733.1 MGP_CBAJ_G0004801.1 mouse_genomes_project 1 96307571 96328356 - Gm29538 lincRNA lincRNA MGP_CBAJ_T0023205.1 MGP_CBAJ_G0016506.1 mouse_genomes_project 1 189880126 189894169 - MGP_CBAJ_P0023205 Slamf7 protein_coding protein_coding MGP_CBAJ_T0023206.1 MGP_CBAJ_G0016506.1 mouse_genomes_project 1 189880920 189894249 - MGP_CBAJ_P0023206 Slamf7 protein_coding protein_coding MGP_CBAJ_T0023207.1 MGP_CBAJ_G0016506.1 mouse_genomes_project 1 189881433 189894169 - MGP_CBAJ_P0023207 Slamf7 protein_coding protein_coding MGP_CBAJ_T0000343.1 MGP_CBAJ_G0000288.1 mouse_genomes_project 1 9255894 9258945 - TEC TEC MGP_CBAJ_T0022850.1 MGP_CBAJ_G0016427.1 mouse_genomes_project 1 182214091 182241714 + MGP_CBAJ_P0022850 Dpt protein_coding protein_coding MGP_CBAJ_T0002693.1 MGP_CBAJ_G0002564.1 mouse_genomes_project 1 15545019 15599546 + antisense antisense MGP_CBAJ_T0000737.1 MGP_CBAJ_G0000676.1 mouse_genomes_project 1 201876900 201880776 - TEC TEC MGP_CBAJ_T0023895.1 MGP_CBAJ_G0016673.1 mouse_genomes_project 1 211959329 211980176 + MGP_CBAJ_P0023895 Nsl1 protein_coding protein_coding MGP_CBAJ_T0023896.1 MGP_CBAJ_G0016673.1 mouse_genomes_project 1 211959341 211981902 + MGP_CBAJ_P0023896 Nsl1 protein_coding protein_coding MGP_CBAJ_T0023897.1 MGP_CBAJ_G0016673.1 mouse_genomes_project 1 211959348 211991623 + MGP_CBAJ_P0023897 Nsl1 protein_coding protein_coding MGP_CBAJ_T0012006.1 MGP_CBAJ_G0010118.1 mouse_genomes_project 1 99663790 99663983 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0020711.1 MGP_CBAJ_G0015979.1 mouse_genomes_project 1 93296360 93299632 + MGP_CBAJ_P0020711 4933407L21Rik protein_coding protein_coding MGP_CBAJ_T0020712.1 MGP_CBAJ_G0015979.1 mouse_genomes_project 1 93296604 93308453 + MGP_CBAJ_P0020712 4933407L21Rik protein_coding protein_coding MGP_CBAJ_T0020713.1 MGP_CBAJ_G0015979.1 mouse_genomes_project 1 93296763 93299632 + 4933407L21Rik protein_coding retained_intron MGP_CBAJ_T0002729.1 MGP_CBAJ_G0002593.1 mouse_genomes_project 1 45071095 45072343 + 8430432A02Rik antisense antisense MGP_CBAJ_T0022763.1 MGP_CBAJ_G0016405.1 mouse_genomes_project 1 179998933 180019570 - MGP_CBAJ_P0022763 Fmo4 protein_coding protein_coding MGP_CBAJ_T0022764.1 MGP_CBAJ_G0016405.1 mouse_genomes_project 1 179999628 180018447 - MGP_CBAJ_P0022764 Fmo4 protein_coding protein_coding MGP_CBAJ_T0022765.1 MGP_CBAJ_G0016405.1 mouse_genomes_project 1 180006656 180019570 - Fmo4 protein_coding retained_intron MGP_CBAJ_T0022766.1 MGP_CBAJ_G0016405.1 mouse_genomes_project 1 180007413 180012279 - Fmo4 protein_coding retained_intron MGP_CBAJ_T0022767.1 MGP_CBAJ_G0016405.1 mouse_genomes_project 1 180011318 180019825 - MGP_CBAJ_P0022767 Fmo4 protein_coding protein_coding MGP_CBAJ_T0022768.1 MGP_CBAJ_G0016405.1 mouse_genomes_project 1 180012089 180019871 - MGP_CBAJ_P0022768 Fmo4 protein_coding protein_coding MGP_CBAJ_T0000716.1 MGP_CBAJ_G0000656.1 mouse_genomes_project 1 196042993 196045314 + TEC TEC MGP_CBAJ_T0022687.1 MGP_CBAJ_G0016391.1 mouse_genomes_project 1 178141509 178164356 + MGP_CBAJ_P0022687 Ankrd45 protein_coding protein_coding MGP_CBAJ_T0022688.1 MGP_CBAJ_G0016391.1 mouse_genomes_project 1 178141530 178171288 + MGP_CBAJ_P0022688 Ankrd45 protein_coding protein_coding MGP_CBAJ_T0022689.1 MGP_CBAJ_G0016391.1 mouse_genomes_project 1 178141530 178165333 + MGP_CBAJ_P0022689 Ankrd45 protein_coding protein_coding MGP_CBAJ_T0022690.1 MGP_CBAJ_G0016391.1 mouse_genomes_project 1 178141541 178168702 + MGP_CBAJ_P0022690 Ankrd45 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022691.1 MGP_CBAJ_G0016391.1 mouse_genomes_project 1 178141558 178165274 + MGP_CBAJ_P0022691 Ankrd45 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012073.1 MGP_CBAJ_G0010185.1 mouse_genomes_project 1 131307468 131307861 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012033.1 MGP_CBAJ_G0010145.1 mouse_genomes_project 1 114392763 114393239 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005745.1 MGP_CBAJ_G0004812.1 mouse_genomes_project 1 98364855 98368310 + Gm28723 lincRNA lincRNA MGP_CBAJ_T0098479.1 MGP_CBAJ_G0036739.1 mouse_genomes_project 1 22309858 22523184 - Gm29506 sense_overlapping sense_overlapping MGP_CBAJ_T0002767.1 MGP_CBAJ_G0002618.1 mouse_genomes_project 1 80872599 80875101 - Gm29539 antisense antisense MGP_CBAJ_T0002775.1 MGP_CBAJ_G0002625.1 mouse_genomes_project 1 89285059 89287900 - antisense antisense MGP_CBAJ_T0023491.1 MGP_CBAJ_G0016593.1 mouse_genomes_project 1 198421919 199053333 - MGP_CBAJ_P0023491 Smyd3 protein_coding protein_coding MGP_CBAJ_T0023492.1 MGP_CBAJ_G0016593.1 mouse_genomes_project 1 198425005 198749997 - Smyd3 protein_coding processed_transcript MGP_CBAJ_T0023493.1 MGP_CBAJ_G0016593.1 mouse_genomes_project 1 198425110 198891561 - Smyd3 protein_coding processed_transcript MGP_CBAJ_T0023494.1 MGP_CBAJ_G0016593.1 mouse_genomes_project 1 198427205 198462869 - Smyd3 protein_coding processed_transcript MGP_CBAJ_T0023495.1 MGP_CBAJ_G0016593.1 mouse_genomes_project 1 198897949 198926208 - Smyd3 protein_coding processed_transcript MGP_CBAJ_T0023496.1 MGP_CBAJ_G0016593.1 mouse_genomes_project 1 198916003 199053340 - MGP_CBAJ_P0023496 Smyd3 protein_coding protein_coding MGP_CBAJ_T0023497.1 MGP_CBAJ_G0016593.1 mouse_genomes_project 1 199036593 199053304 - MGP_CBAJ_P0023497 Smyd3 protein_coding protein_coding MGP_CBAJ_T0023229.1 MGP_CBAJ_G0016513.1 mouse_genomes_project 1 190340637 190345896 - MGP_CBAJ_P0023229 Nhlh1 protein_coding protein_coding MGP_CBAJ_T0011873.1 MGP_CBAJ_G0009985.1 mouse_genomes_project 1 48279381 48279846 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002771.1 MGP_CBAJ_G0002622.1 mouse_genomes_project 1 81453090 81463243 - Gm15179 antisense antisense MGP_CBAJ_T0002772.1 MGP_CBAJ_G0002622.1 mouse_genomes_project 1 81453150 81455333 - Gm15179 antisense antisense MGP_CBAJ_T0019715.1 MGP_CBAJ_G0015796.1 mouse_genomes_project 1 62528745 62598574 - MGP_CBAJ_P0019715 Fam126b protein_coding protein_coding MGP_CBAJ_T0019716.1 MGP_CBAJ_G0015796.1 mouse_genomes_project 1 62532959 62598517 - MGP_CBAJ_P0019716 Fam126b protein_coding protein_coding MGP_CBAJ_T0019717.1 MGP_CBAJ_G0015796.1 mouse_genomes_project 1 62534343 62577154 - MGP_CBAJ_P0019717 Fam126b protein_coding nonsense_mediated_decay MGP_CBAJ_T0019718.1 MGP_CBAJ_G0015796.1 mouse_genomes_project 1 62535685 62598426 - MGP_CBAJ_P0019718 Fam126b protein_coding protein_coding MGP_CBAJ_T0019719.1 MGP_CBAJ_G0015796.1 mouse_genomes_project 1 62563296 62598526 - MGP_CBAJ_P0019719 Fam126b protein_coding protein_coding MGP_CBAJ_T0019720.1 MGP_CBAJ_G0015796.1 mouse_genomes_project 1 62568450 62598515 - Fam126b protein_coding processed_transcript MGP_CBAJ_T0019721.1 MGP_CBAJ_G0015796.1 mouse_genomes_project 1 62568477 62598528 - Fam126b protein_coding retained_intron MGP_CBAJ_T0019722.1 MGP_CBAJ_G0015796.1 mouse_genomes_project 1 62573634 62576419 - Fam126b protein_coding retained_intron MGP_CBAJ_T0019723.1 MGP_CBAJ_G0015796.1 mouse_genomes_project 1 62576802 62598548 - Fam126b protein_coding retained_intron MGP_CBAJ_T0097867.1 MGP_CBAJ_G0036140.1 mouse_genomes_project 1 56637449 56637568 - n-R5s211 rRNA rRNA MGP_CBAJ_T0022663.1 MGP_CBAJ_G0016388.1 mouse_genomes_project 1 178019719 178060508 - MGP_CBAJ_P0022663 Dars2 protein_coding protein_coding MGP_CBAJ_T0022664.1 MGP_CBAJ_G0016388.1 mouse_genomes_project 1 178020300 178060492 - Dars2 protein_coding retained_intron MGP_CBAJ_T0022665.1 MGP_CBAJ_G0016388.1 mouse_genomes_project 1 178020609 178026080 - Dars2 protein_coding processed_transcript MGP_CBAJ_T0022666.1 MGP_CBAJ_G0016388.1 mouse_genomes_project 1 178020615 178060506 - Dars2 protein_coding retained_intron MGP_CBAJ_T0022667.1 MGP_CBAJ_G0016388.1 mouse_genomes_project 1 178024120 178060457 - Dars2 protein_coding retained_intron MGP_CBAJ_T0022668.1 MGP_CBAJ_G0016388.1 mouse_genomes_project 1 178047243 178048274 - Dars2 protein_coding retained_intron MGP_CBAJ_T0022669.1 MGP_CBAJ_G0016388.1 mouse_genomes_project 1 178047602 178060480 - Dars2 protein_coding processed_transcript MGP_CBAJ_T0022218.1 MGP_CBAJ_G0016310.1 mouse_genomes_project 1 159366052 159421563 - Rgs21 protein_coding processed_transcript MGP_CBAJ_T0022219.1 MGP_CBAJ_G0016310.1 mouse_genomes_project 1 159368003 159404100 - MGP_CBAJ_P0022219 Rgs21 protein_coding protein_coding MGP_CBAJ_T0023327.1 MGP_CBAJ_G0016536.1 mouse_genomes_project 1 191370384 191371820 + MGP_CBAJ_P0023327 Olfr16 protein_coding protein_coding MGP_CBAJ_T0000427.1 MGP_CBAJ_G0000369.1 mouse_genomes_project 1 45516400 45518891 + TEC TEC MGP_CBAJ_T0101509.1 MGP_CBAJ_G0039541.1 mouse_genomes_project 1 200680726 200680858 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0023370.1 MGP_CBAJ_G0016559.1 mouse_genomes_project 1 192898550 192900908 + MGP_CBAJ_P0023370 protein_coding protein_coding MGP_CBAJ_T0012118.1 MGP_CBAJ_G0010230.1 mouse_genomes_project 1 153307477 153308252 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0019528.1 MGP_CBAJ_G0015760.1 mouse_genomes_project 1 56540159 56552879 + MGP_CBAJ_P0019528 Osgepl1 protein_coding protein_coding MGP_CBAJ_T0019529.1 MGP_CBAJ_G0015760.1 mouse_genomes_project 1 56540189 56552710 + MGP_CBAJ_P0019529 Osgepl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019530.1 MGP_CBAJ_G0015760.1 mouse_genomes_project 1 56540192 56543168 + Osgepl1 protein_coding processed_transcript MGP_CBAJ_T0019531.1 MGP_CBAJ_G0015760.1 mouse_genomes_project 1 56540192 56545194 + Osgepl1 protein_coding retained_intron MGP_CBAJ_T0019532.1 MGP_CBAJ_G0015760.1 mouse_genomes_project 1 56540198 56550600 + MGP_CBAJ_P0019532 Osgepl1 protein_coding protein_coding MGP_CBAJ_T0019533.1 MGP_CBAJ_G0015760.1 mouse_genomes_project 1 56540208 56552703 + MGP_CBAJ_P0019533 Osgepl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019534.1 MGP_CBAJ_G0015760.1 mouse_genomes_project 1 56546244 56552711 + Osgepl1 protein_coding retained_intron MGP_CBAJ_T0005921.1 MGP_CBAJ_G0004956.1 mouse_genomes_project 1 201486845 201511624 + lincRNA lincRNA MGP_CBAJ_T0005922.1 MGP_CBAJ_G0004956.1 mouse_genomes_project 1 201486871 201501317 + lincRNA lincRNA MGP_CBAJ_T0020939.1 MGP_CBAJ_G0016033.1 mouse_genomes_project 1 97977099 97980307 - MGP_CBAJ_P0020939 Gbx2 protein_coding protein_coding MGP_CBAJ_T0020940.1 MGP_CBAJ_G0016033.1 mouse_genomes_project 1 97977109 97978329 - Gbx2 protein_coding retained_intron MGP_CBAJ_T0097880.1 MGP_CBAJ_G0036153.1 mouse_genomes_project 1 165331184 165331293 - n-R5s218 rRNA rRNA MGP_CBAJ_T0002929.1 MGP_CBAJ_G0002745.1 mouse_genomes_project 1 213028851 213032145 - Gm26670 antisense antisense MGP_CBAJ_T0000732.1 MGP_CBAJ_G0000671.1 mouse_genomes_project 1 200103700 200107437 - TEC TEC MGP_CBAJ_T0021818.1 MGP_CBAJ_G0016224.1 mouse_genomes_project 1 146734355 146753973 + MGP_CBAJ_P0021818 protein_coding protein_coding MGP_CBAJ_T0021819.1 MGP_CBAJ_G0016224.1 mouse_genomes_project 1 146734355 146754007 + MGP_CBAJ_P0021819 protein_coding protein_coding MGP_CBAJ_T0021824.1 MGP_CBAJ_G0016224.1 mouse_genomes_project 1 146748270 146754007 + MGP_CBAJ_P0021824 protein_coding protein_coding MGP_CBAJ_T0022997.1 MGP_CBAJ_G0016460.1 mouse_genomes_project 1 187568070 187610607 + MGP_CBAJ_P0022997 Rgs5 protein_coding protein_coding MGP_CBAJ_T0022998.1 MGP_CBAJ_G0016460.1 mouse_genomes_project 1 187568091 187596429 + MGP_CBAJ_P0022998 Rgs5 protein_coding protein_coding MGP_CBAJ_T0000616.1 MGP_CBAJ_G0000557.1 mouse_genomes_project 1 151980732 151983753 + TEC TEC MGP_CBAJ_T0000617.1 MGP_CBAJ_G0000557.1 mouse_genomes_project 1 151981651 151983753 + TEC TEC MGP_CBAJ_T0011844.1 MGP_CBAJ_G0009956.1 mouse_genomes_project 1 35855639 35855874 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0023981.1 MGP_CBAJ_G0016692.1 mouse_genomes_project 1 214174336 214197890 - MGP_CBAJ_P0023981 protein_coding protein_coding MGP_CBAJ_T0023982.1 MGP_CBAJ_G0016692.1 mouse_genomes_project 1 214175798 214200772 - MGP_CBAJ_P0023982 protein_coding protein_coding MGP_CBAJ_T0023983.1 MGP_CBAJ_G0016692.1 mouse_genomes_project 1 214187623 214215780 - MGP_CBAJ_P0023983 protein_coding protein_coding MGP_CBAJ_T0023984.1 MGP_CBAJ_G0016692.1 mouse_genomes_project 1 214187639 214215752 - MGP_CBAJ_P0023984 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023985.1 MGP_CBAJ_G0016692.1 mouse_genomes_project 1 214190969 214198593 - protein_coding retained_intron MGP_CBAJ_T0023986.1 MGP_CBAJ_G0016692.1 mouse_genomes_project 1 214203692 214205686 - protein_coding retained_intron MGP_CBAJ_T0023987.1 MGP_CBAJ_G0016692.1 mouse_genomes_project 1 214203857 214213856 - protein_coding processed_transcript MGP_CBAJ_T0023988.1 MGP_CBAJ_G0016692.1 mouse_genomes_project 1 214205256 214215715 - MGP_CBAJ_P0023988 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023989.1 MGP_CBAJ_G0016692.1 mouse_genomes_project 1 214205274 214207023 - protein_coding processed_transcript MGP_CBAJ_T0020756.1 MGP_CBAJ_G0015988.1 mouse_genomes_project 1 93761601 93780329 - MGP_CBAJ_P0020756 Ncl protein_coding protein_coding MGP_CBAJ_T0020757.1 MGP_CBAJ_G0015988.1 mouse_genomes_project 1 93767377 93780293 - Ncl protein_coding retained_intron MGP_CBAJ_T0020758.1 MGP_CBAJ_G0015988.1 mouse_genomes_project 1 93767378 93768594 - Ncl protein_coding retained_intron MGP_CBAJ_T0020759.1 MGP_CBAJ_G0015988.1 mouse_genomes_project 1 93767446 93769446 - Ncl protein_coding retained_intron MGP_CBAJ_T0020760.1 MGP_CBAJ_G0015988.1 mouse_genomes_project 1 93767502 93780152 - MGP_CBAJ_P0020760 Ncl protein_coding unknown_likely_coding MGP_CBAJ_T0020761.1 MGP_CBAJ_G0015988.1 mouse_genomes_project 1 93768483 93769689 - Ncl protein_coding retained_intron MGP_CBAJ_T0020762.1 MGP_CBAJ_G0015988.1 mouse_genomes_project 1 93774694 93779898 - MGP_CBAJ_P0020762 Ncl protein_coding protein_coding MGP_CBAJ_T0098245.1 MGP_CBAJ_G0036517.1 mouse_genomes_project 1 168681724 168705470 - Gm28792 sense_intronic sense_intronic MGP_CBAJ_T0011806.1 MGP_CBAJ_G0009918.1 mouse_genomes_project 1 27119327 27119744 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0020913.1 MGP_CBAJ_G0016022.1 mouse_genomes_project 1 95971443 95995691 + MGP_CBAJ_P0020913 Ugt1a2 protein_coding protein_coding MGP_CBAJ_T0005665.1 MGP_CBAJ_G0004752.1 mouse_genomes_project 1 65982653 65983731 + Gm28449 lincRNA lincRNA MGP_CBAJ_T0021595.1 MGP_CBAJ_G0016174.1 mouse_genomes_project 1 142207457 142373652 + Thsd7b protein_coding retained_intron MGP_CBAJ_T0021596.1 MGP_CBAJ_G0016174.1 mouse_genomes_project 1 142207499 143278920 + MGP_CBAJ_P0021596 Thsd7b protein_coding protein_coding MGP_CBAJ_T0021597.1 MGP_CBAJ_G0016174.1 mouse_genomes_project 1 142207618 143074763 + MGP_CBAJ_P0021597 Thsd7b protein_coding protein_coding MGP_CBAJ_T0021598.1 MGP_CBAJ_G0016174.1 mouse_genomes_project 1 142207640 142595994 + Thsd7b protein_coding processed_transcript MGP_CBAJ_T0021599.1 MGP_CBAJ_G0016174.1 mouse_genomes_project 1 142481436 142596028 + MGP_CBAJ_P0021599 Thsd7b protein_coding protein_coding MGP_CBAJ_T0021600.1 MGP_CBAJ_G0016174.1 mouse_genomes_project 1 142580125 142582893 + Thsd7b protein_coding retained_intron MGP_CBAJ_T0021601.1 MGP_CBAJ_G0016174.1 mouse_genomes_project 1 142912811 143225154 + Thsd7b protein_coding processed_transcript MGP_CBAJ_T0021602.1 MGP_CBAJ_G0016174.1 mouse_genomes_project 1 143202849 143278918 + Thsd7b protein_coding processed_transcript MGP_CBAJ_T0021603.1 MGP_CBAJ_G0016174.1 mouse_genomes_project 1 143202864 143204426 + Thsd7b protein_coding processed_transcript MGP_CBAJ_T0022181.1 MGP_CBAJ_G0016304.1 mouse_genomes_project 1 158504866 158535391 + Glrx2 protein_coding retained_intron MGP_CBAJ_T0022182.1 MGP_CBAJ_G0016304.1 mouse_genomes_project 1 158527639 158535393 + MGP_CBAJ_P0022182 Glrx2 protein_coding protein_coding MGP_CBAJ_T0022183.1 MGP_CBAJ_G0016304.1 mouse_genomes_project 1 158528167 158531355 + Glrx2 protein_coding processed_transcript MGP_CBAJ_T0022184.1 MGP_CBAJ_G0016304.1 mouse_genomes_project 1 158528167 158538016 + MGP_CBAJ_P0022184 Glrx2 protein_coding protein_coding MGP_CBAJ_T0022185.1 MGP_CBAJ_G0016304.1 mouse_genomes_project 1 158528176 158531721 + Glrx2 protein_coding retained_intron MGP_CBAJ_T0022186.1 MGP_CBAJ_G0016304.1 mouse_genomes_project 1 158528220 158531458 + Glrx2 protein_coding processed_transcript MGP_CBAJ_T0022187.1 MGP_CBAJ_G0016304.1 mouse_genomes_project 1 158528225 158535393 + MGP_CBAJ_P0022187 Glrx2 protein_coding protein_coding MGP_CBAJ_T0022188.1 MGP_CBAJ_G0016304.1 mouse_genomes_project 1 158528228 158534216 + MGP_CBAJ_P0022188 Glrx2 protein_coding protein_coding MGP_CBAJ_T0022189.1 MGP_CBAJ_G0016304.1 mouse_genomes_project 1 158528256 158535926 + MGP_CBAJ_P0022189 Glrx2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022190.1 MGP_CBAJ_G0016304.1 mouse_genomes_project 1 158528985 158538258 + MGP_CBAJ_P0022190 Glrx2 protein_coding protein_coding MGP_CBAJ_T0022191.1 MGP_CBAJ_G0016304.1 mouse_genomes_project 1 158532030 158534281 + Glrx2 protein_coding retained_intron MGP_CBAJ_T0022192.1 MGP_CBAJ_G0016304.1 mouse_genomes_project 1 158533601 158535303 + Glrx2 protein_coding retained_intron MGP_CBAJ_T0022193.1 MGP_CBAJ_G0016304.1 mouse_genomes_project 1 158534587 158535392 + Glrx2 protein_coding processed_transcript MGP_CBAJ_T0012094.1 MGP_CBAJ_G0010206.1 mouse_genomes_project 1 139666845 139667558 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018884.1 MGP_CBAJ_G0015639.1 mouse_genomes_project 1 31294030 31309938 - MGP_CBAJ_P0018884 Ptp4a1 protein_coding protein_coding MGP_CBAJ_T0018885.1 MGP_CBAJ_G0015639.1 mouse_genomes_project 1 31303198 31304263 - Ptp4a1 protein_coding retained_intron MGP_CBAJ_T0018886.1 MGP_CBAJ_G0015639.1 mouse_genomes_project 1 31306714 31309755 - MGP_CBAJ_P0018886 Ptp4a1 protein_coding protein_coding MGP_CBAJ_T0101493.1 MGP_CBAJ_G0039525.1 mouse_genomes_project 1 191489197 191490056 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0021277.1 MGP_CBAJ_G0016104.1 mouse_genomes_project 1 114714300 114962261 + MGP_CBAJ_P0021277 Cdh20 protein_coding protein_coding MGP_CBAJ_T0023928.1 MGP_CBAJ_G0016682.1 mouse_genomes_project 1 212715356 212795084 + MGP_CBAJ_P0023928 Lpgat1 protein_coding protein_coding MGP_CBAJ_T0023929.1 MGP_CBAJ_G0016682.1 mouse_genomes_project 1 212715356 212716920 + MGP_CBAJ_P0023929 Lpgat1 protein_coding protein_coding MGP_CBAJ_T0023930.1 MGP_CBAJ_G0016682.1 mouse_genomes_project 1 212715549 212717308 + Lpgat1 protein_coding retained_intron MGP_CBAJ_T0023931.1 MGP_CBAJ_G0016682.1 mouse_genomes_project 1 212715911 212790806 + MGP_CBAJ_P0023931 Lpgat1 protein_coding protein_coding MGP_CBAJ_T0023932.1 MGP_CBAJ_G0016682.1 mouse_genomes_project 1 212716043 212770981 + MGP_CBAJ_P0023932 Lpgat1 protein_coding protein_coding MGP_CBAJ_T0005768.1 MGP_CBAJ_G0004833.1 mouse_genomes_project 1 107764837 107780221 + Gm7967 lincRNA lincRNA MGP_CBAJ_T0005769.1 MGP_CBAJ_G0004833.1 mouse_genomes_project 1 107764838 107779981 + Gm7967 lincRNA lincRNA MGP_CBAJ_T0016829.1 MGP_CBAJ_G0014864.1 mouse_genomes_project 1 189923179 189928414 - A630035G10Rik processed_transcript lincRNA MGP_CBAJ_T0016830.1 MGP_CBAJ_G0014864.1 mouse_genomes_project 1 189926600 189928457 - A630035G10Rik processed_transcript retained_intron MGP_CBAJ_T0021328.1 MGP_CBAJ_G0016115.1 mouse_genomes_project 1 117141617 117168004 + MGP_CBAJ_P0021328 Serpinb12 protein_coding protein_coding MGP_CBAJ_T0021329.1 MGP_CBAJ_G0016115.1 mouse_genomes_project 1 117149889 117168004 + MGP_CBAJ_P0021329 Serpinb12 protein_coding protein_coding MGP_CBAJ_T0021330.1 MGP_CBAJ_G0016115.1 mouse_genomes_project 1 117149891 117161382 + Serpinb12 protein_coding retained_intron MGP_CBAJ_T0016745.1 MGP_CBAJ_G0014839.1 mouse_genomes_project 1 69557821 69568578 - 2810408I11Rik processed_transcript antisense MGP_CBAJ_T0016746.1 MGP_CBAJ_G0014839.1 mouse_genomes_project 1 69561280 69568527 - 2810408I11Rik processed_transcript antisense MGP_CBAJ_T0016747.1 MGP_CBAJ_G0014839.1 mouse_genomes_project 1 69567042 69568547 - 2810408I11Rik processed_transcript retained_intron MGP_CBAJ_T0002907.1 MGP_CBAJ_G0002730.1 mouse_genomes_project 1 207128077 207129400 + Gm29491 antisense antisense MGP_CBAJ_T0012108.1 MGP_CBAJ_G0010220.1 mouse_genomes_project 1 150726274 150726613 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000473.1 MGP_CBAJ_G0000415.1 mouse_genomes_project 1 73387510 73388863 - TEC TEC MGP_CBAJ_T0011985.1 MGP_CBAJ_G0010097.1 mouse_genomes_project 1 89765655 89766046 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0022851.1 MGP_CBAJ_G0016428.1 mouse_genomes_project 1 182358198 182362082 - MGP_CBAJ_P0022851 Xcl1 protein_coding protein_coding MGP_CBAJ_T0021703.1 MGP_CBAJ_G0016202.1 mouse_genomes_project 1 145123923 145131537 + MGP_CBAJ_P0021703 protein_coding unknown_likely_coding MGP_CBAJ_T0021704.1 MGP_CBAJ_G0016202.1 mouse_genomes_project 1 145124154 145131459 + MGP_CBAJ_P0021704 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021705.1 MGP_CBAJ_G0016202.1 mouse_genomes_project 1 145124296 145127627 + protein_coding retained_intron MGP_CBAJ_T0011945.1 MGP_CBAJ_G0010057.1 mouse_genomes_project 1 69305512 69305730 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005758.1 MGP_CBAJ_G0004825.1 mouse_genomes_project 1 101526951 101528131 - Gm28086 lincRNA lincRNA MGP_CBAJ_T0000731.1 MGP_CBAJ_G0000670.1 mouse_genomes_project 1 199990792 199993863 + TEC TEC MGP_CBAJ_T0002858.1 MGP_CBAJ_G0002691.1 mouse_genomes_project 1 178019738 178020525 + Gm37634 antisense antisense MGP_CBAJ_T0021826.1 MGP_CBAJ_G0016226.1 mouse_genomes_project 1 146777439 146807991 + MGP_CBAJ_P0021826 unknown_likely_coding unknown_likely_coding MGP_CBAJ_T0011756.1 MGP_CBAJ_G0009868.1 mouse_genomes_project 1 7267290 7268229 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021593.1 MGP_CBAJ_G0016173.1 mouse_genomes_project 1 141405833 141409737 - MGP_CBAJ_P0021593 Cxcr4 protein_coding protein_coding MGP_CBAJ_T0021594.1 MGP_CBAJ_G0016173.1 mouse_genomes_project 1 141406570 141409740 - MGP_CBAJ_P0021594 Cxcr4 protein_coding protein_coding MGP_CBAJ_T0022560.1 MGP_CBAJ_G0016372.1 mouse_genomes_project 1 173635384 173956428 - MGP_CBAJ_P0022560 Rasal2 protein_coding protein_coding MGP_CBAJ_T0022561.1 MGP_CBAJ_G0016372.1 mouse_genomes_project 1 173640792 173955767 - MGP_CBAJ_P0022561 Rasal2 protein_coding protein_coding MGP_CBAJ_T0022562.1 MGP_CBAJ_G0016372.1 mouse_genomes_project 1 173678349 173763681 - MGP_CBAJ_P0022562 Rasal2 protein_coding protein_coding MGP_CBAJ_T0022563.1 MGP_CBAJ_G0016372.1 mouse_genomes_project 1 173678542 173776828 - MGP_CBAJ_P0022563 Rasal2 protein_coding protein_coding MGP_CBAJ_T0022564.1 MGP_CBAJ_G0016372.1 mouse_genomes_project 1 173681477 173683820 - Rasal2 protein_coding processed_transcript MGP_CBAJ_T0022565.1 MGP_CBAJ_G0016372.1 mouse_genomes_project 1 173681477 173746777 - MGP_CBAJ_P0022565 Rasal2 protein_coding protein_coding MGP_CBAJ_T0022566.1 MGP_CBAJ_G0016372.1 mouse_genomes_project 1 173811485 173956428 - Rasal2 protein_coding retained_intron MGP_CBAJ_T0019759.1 MGP_CBAJ_G0015804.1 mouse_genomes_project 1 63295841 63317371 - MGP_CBAJ_P0019759 Tmem237 protein_coding protein_coding MGP_CBAJ_T0019760.1 MGP_CBAJ_G0015804.1 mouse_genomes_project 1 63295848 63317083 - MGP_CBAJ_P0019760 Tmem237 protein_coding protein_coding MGP_CBAJ_T0019761.1 MGP_CBAJ_G0015804.1 mouse_genomes_project 1 63296162 63317659 - MGP_CBAJ_P0019761 Tmem237 protein_coding protein_coding MGP_CBAJ_T0019762.1 MGP_CBAJ_G0015804.1 mouse_genomes_project 1 63304231 63317389 - MGP_CBAJ_P0019762 Tmem237 protein_coding protein_coding MGP_CBAJ_T0019763.1 MGP_CBAJ_G0015804.1 mouse_genomes_project 1 63304820 63311587 - Tmem237 protein_coding retained_intron MGP_CBAJ_T0019764.1 MGP_CBAJ_G0015804.1 mouse_genomes_project 1 63305125 63317685 - MGP_CBAJ_P0019764 Tmem237 protein_coding protein_coding MGP_CBAJ_T0019765.1 MGP_CBAJ_G0015804.1 mouse_genomes_project 1 63306841 63313229 - Tmem237 protein_coding retained_intron MGP_CBAJ_T0005672.1 MGP_CBAJ_G0004756.1 mouse_genomes_project 1 67774980 67788910 + Gm20342 lincRNA lincRNA MGP_CBAJ_T0005964.1 MGP_CBAJ_G0004986.1 mouse_genomes_project 1 211875649 211877635 + Gm31373 lincRNA lincRNA MGP_CBAJ_T0005915.1 MGP_CBAJ_G0004951.1 mouse_genomes_project 1 200139260 200152992 - Gm37267 lincRNA lincRNA MGP_CBAJ_T0011937.1 MGP_CBAJ_G0010049.1 mouse_genomes_project 1 67279071 67279950 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002849.1 MGP_CBAJ_G0002682.1 mouse_genomes_project 1 171498751 171500607 + Gm37622 antisense antisense MGP_CBAJ_T0098546.1 MGP_CBAJ_G0036801.1 mouse_genomes_project 1 94806347 94806448 + Gm26187 snRNA snRNA MGP_CBAJ_T0005654.1 MGP_CBAJ_G0004743.1 mouse_genomes_project 1 62507621 62515091 + Gm15834 lincRNA lincRNA MGP_CBAJ_T0005655.1 MGP_CBAJ_G0004743.1 mouse_genomes_project 1 62507625 62523475 + Gm15834 lincRNA lincRNA MGP_CBAJ_T0005656.1 MGP_CBAJ_G0004743.1 mouse_genomes_project 1 62507628 62529171 + Gm15834 lincRNA lincRNA MGP_CBAJ_T0098553.1 MGP_CBAJ_G0036808.1 mouse_genomes_project 1 108241209 108241309 + Gm23434 snRNA snRNA MGP_CBAJ_T0020483.1 MGP_CBAJ_G0015932.1 mouse_genomes_project 1 81588800 81596615 - protein_coding retained_intron MGP_CBAJ_T0020488.1 MGP_CBAJ_G0015932.1 mouse_genomes_project 1 81595206 81622866 - MGP_CBAJ_P0020488 protein_coding protein_coding MGP_CBAJ_T0020489.1 MGP_CBAJ_G0015932.1 mouse_genomes_project 1 81596232 81597184 - protein_coding retained_intron MGP_CBAJ_T0020490.1 MGP_CBAJ_G0015932.1 mouse_genomes_project 1 81596604 81597460 - protein_coding retained_intron MGP_CBAJ_T0020491.1 MGP_CBAJ_G0015932.1 mouse_genomes_project 1 81599915 81622146 - MGP_CBAJ_P0020491 protein_coding protein_coding MGP_CBAJ_T0020492.1 MGP_CBAJ_G0015932.1 mouse_genomes_project 1 81600230 81602449 - MGP_CBAJ_P0020492 protein_coding protein_coding MGP_CBAJ_T0020493.1 MGP_CBAJ_G0015932.1 mouse_genomes_project 1 81600350 81601193 - protein_coding retained_intron MGP_CBAJ_T0020494.1 MGP_CBAJ_G0015932.1 mouse_genomes_project 1 81600739 81602013 - protein_coding processed_transcript MGP_CBAJ_T0020495.1 MGP_CBAJ_G0015932.1 mouse_genomes_project 1 81601776 81602423 - protein_coding retained_intron MGP_CBAJ_T0020496.1 MGP_CBAJ_G0015932.1 mouse_genomes_project 1 81612841 81622866 - MGP_CBAJ_P0020496 protein_coding protein_coding MGP_CBAJ_T0020497.1 MGP_CBAJ_G0015932.1 mouse_genomes_project 1 81612842 81620185 - protein_coding retained_intron MGP_CBAJ_T0020498.1 MGP_CBAJ_G0015932.1 mouse_genomes_project 1 81618177 81622957 - protein_coding retained_intron MGP_CBAJ_T0020499.1 MGP_CBAJ_G0015932.1 mouse_genomes_project 1 81618177 81622866 - protein_coding retained_intron MGP_CBAJ_T0002864.1 MGP_CBAJ_G0002695.1 mouse_genomes_project 1 179357015 179364928 + Dnm3os antisense antisense MGP_CBAJ_T0002865.1 MGP_CBAJ_G0002695.1 mouse_genomes_project 1 179357015 179364926 + Dnm3os antisense antisense MGP_CBAJ_T0002866.1 MGP_CBAJ_G0002695.1 mouse_genomes_project 1 179357056 179361491 + Dnm3os antisense antisense MGP_CBAJ_T0101011.1 MGP_CBAJ_G0039253.1 mouse_genomes_project 1 205755523 205768710 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101012.1 MGP_CBAJ_G0039253.1 mouse_genomes_project 1 205767933 205768569 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0005751.1 MGP_CBAJ_G0004818.1 mouse_genomes_project 1 99680682 99682433 + Gm28382 lincRNA lincRNA MGP_CBAJ_T0098482.1 MGP_CBAJ_G0036741.1 mouse_genomes_project 1 115393808 115423399 - sense_overlapping sense_overlapping MGP_CBAJ_T0020609.1 MGP_CBAJ_G0015959.1 mouse_genomes_project 1 89493164 89555564 + Col4a3 protein_coding retained_intron MGP_CBAJ_T0020610.1 MGP_CBAJ_G0015959.1 mouse_genomes_project 1 89493219 89656944 + MGP_CBAJ_P0020610 Col4a3 protein_coding protein_coding MGP_CBAJ_T0020611.1 MGP_CBAJ_G0015959.1 mouse_genomes_project 1 89646149 89654105 + MGP_CBAJ_P0020611 Col4a3 protein_coding protein_coding MGP_CBAJ_T0020612.1 MGP_CBAJ_G0015959.1 mouse_genomes_project 1 89646149 89654024 + MGP_CBAJ_P0020612 Col4a3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0101441.1 MGP_CBAJ_G0039473.1 mouse_genomes_project 1 20130511 20140517 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0000467.1 MGP_CBAJ_G0000409.1 mouse_genomes_project 1 71874066 71876621 - TEC TEC MGP_CBAJ_T0020816.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94903362 94939010 + Gigyf2 protein_coding processed_transcript MGP_CBAJ_T0020817.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94903367 95050552 + MGP_CBAJ_P0020817 Gigyf2 protein_coding protein_coding MGP_CBAJ_T0020818.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94903393 95047601 + MGP_CBAJ_P0020818 Gigyf2 protein_coding protein_coding MGP_CBAJ_T0020819.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94903394 94941072 + Gigyf2 protein_coding processed_transcript MGP_CBAJ_T0020820.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94903397 95020143 + MGP_CBAJ_P0020820 Gigyf2 protein_coding protein_coding MGP_CBAJ_T0020821.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94903410 94905372 + Gigyf2 protein_coding retained_intron MGP_CBAJ_T0020822.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94903412 94978554 + Gigyf2 protein_coding processed_transcript MGP_CBAJ_T0020823.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94903430 95028752 + MGP_CBAJ_P0020823 Gigyf2 protein_coding protein_coding MGP_CBAJ_T0020824.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94937733 95047601 + MGP_CBAJ_P0020824 Gigyf2 protein_coding protein_coding MGP_CBAJ_T0020825.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94937733 95047601 + MGP_CBAJ_P0020825 Gigyf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020826.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94946914 94966673 + Gigyf2 protein_coding retained_intron MGP_CBAJ_T0020827.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94947273 94948768 + Gigyf2 protein_coding retained_intron MGP_CBAJ_T0020828.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94973987 94994982 + Gigyf2 protein_coding processed_transcript MGP_CBAJ_T0020829.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94974008 94994713 + MGP_CBAJ_P0020829 Gigyf2 protein_coding protein_coding MGP_CBAJ_T0020832.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94991337 95040470 + MGP_CBAJ_P0020832 Gigyf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020833.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94991396 94995371 + MGP_CBAJ_P0020833 Gigyf2 protein_coding protein_coding MGP_CBAJ_T0020834.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94992585 94995281 + MGP_CBAJ_P0020834 Gigyf2 protein_coding protein_coding MGP_CBAJ_T0020835.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94992617 94998372 + MGP_CBAJ_P0020835 Gigyf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020836.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94992633 94995036 + MGP_CBAJ_P0020836 Gigyf2 protein_coding protein_coding MGP_CBAJ_T0020837.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 94995048 95010213 + MGP_CBAJ_P0020837 Gigyf2 protein_coding protein_coding MGP_CBAJ_T0020838.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 95028072 95050552 + Gigyf2 protein_coding processed_transcript MGP_CBAJ_T0020839.1 MGP_CBAJ_G0016005.1 mouse_genomes_project 1 95041771 95047664 + Gigyf2 protein_coding retained_intron MGP_CBAJ_T0000642.1 MGP_CBAJ_G0000582.1 mouse_genomes_project 1 165007284 165009329 - TEC TEC MGP_CBAJ_T0012061.1 MGP_CBAJ_G0010173.1 mouse_genomes_project 1 124592701 124593237 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098575.1 MGP_CBAJ_G0036830.1 mouse_genomes_project 1 165304458 165304564 - Gm23535 snRNA snRNA MGP_CBAJ_T0021746.1 MGP_CBAJ_G0016209.1 mouse_genomes_project 1 145542535 145543255 - MGP_CBAJ_P0021746 Gm10188 protein_coding protein_coding MGP_CBAJ_T0023524.1 MGP_CBAJ_G0016600.1 mouse_genomes_project 1 199373153 199374454 + MGP_CBAJ_P0023524 Gm10518 protein_coding protein_coding MGP_CBAJ_T0023412.1 MGP_CBAJ_G0016576.1 mouse_genomes_project 1 194654283 194699481 + Wdr64 protein_coding processed_transcript MGP_CBAJ_T0023413.1 MGP_CBAJ_G0016576.1 mouse_genomes_project 1 194654283 194771567 + MGP_CBAJ_P0023413 Wdr64 protein_coding protein_coding MGP_CBAJ_T0023414.1 MGP_CBAJ_G0016576.1 mouse_genomes_project 1 194654283 194771567 + MGP_CBAJ_P0023414 Wdr64 protein_coding protein_coding MGP_CBAJ_T0023415.1 MGP_CBAJ_G0016576.1 mouse_genomes_project 1 194654477 194771199 + MGP_CBAJ_P0023415 Wdr64 protein_coding protein_coding MGP_CBAJ_T0023416.1 MGP_CBAJ_G0016576.1 mouse_genomes_project 1 194722270 194771564 + MGP_CBAJ_P0023416 Wdr64 protein_coding nonsense_mediated_decay MGP_CBAJ_T0016756.1 MGP_CBAJ_G0014844.1 mouse_genomes_project 1 95710481 95995278 - processed_transcript processed_transcript MGP_CBAJ_T0022406.1 MGP_CBAJ_G0016345.1 mouse_genomes_project 1 170000910 170005443 + MGP_CBAJ_P0022406 Teddm1b protein_coding protein_coding MGP_CBAJ_T0005648.1 MGP_CBAJ_G0004738.1 mouse_genomes_project 1 59747704 59748930 + 1700003I22Rik lincRNA lincRNA MGP_CBAJ_T0005649.1 MGP_CBAJ_G0004738.1 mouse_genomes_project 1 59747749 59748864 + 1700003I22Rik lincRNA lincRNA MGP_CBAJ_T0022145.1 MGP_CBAJ_G0016294.1 mouse_genomes_project 1 153648625 153668190 + MGP_CBAJ_P0022145 Zbtb41 protein_coding protein_coding MGP_CBAJ_T0022146.1 MGP_CBAJ_G0016294.1 mouse_genomes_project 1 153648719 153679338 + MGP_CBAJ_P0022146 Zbtb41 protein_coding protein_coding MGP_CBAJ_T0022147.1 MGP_CBAJ_G0016294.1 mouse_genomes_project 1 153649991 153675516 + MGP_CBAJ_P0022147 Zbtb41 protein_coding nonsense_mediated_decay MGP_CBAJ_T0002774.1 MGP_CBAJ_G0002624.1 mouse_genomes_project 1 84760733 84775216 - Gm28410 antisense antisense MGP_CBAJ_T0022830.1 MGP_CBAJ_G0016423.1 mouse_genomes_project 1 181649609 181661864 + MGP_CBAJ_P0022830 Ccdc181 protein_coding protein_coding MGP_CBAJ_T0011825.1 MGP_CBAJ_G0009937.1 mouse_genomes_project 1 33688479 33690627 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0020714.1 MGP_CBAJ_G0015980.1 mouse_genomes_project 1 93306145 93328794 - MGP_CBAJ_P0020714 Gpr55 protein_coding protein_coding MGP_CBAJ_T0005598.1 MGP_CBAJ_G0004707.1 mouse_genomes_project 1 37140418 37149826 + Gm33280 lincRNA lincRNA MGP_CBAJ_T0000469.1 MGP_CBAJ_G0000411.1 mouse_genomes_project 1 71900489 71901628 - TEC TEC MGP_CBAJ_T0000715.1 MGP_CBAJ_G0000655.1 mouse_genomes_project 1 195961067 195961791 + TEC TEC MGP_CBAJ_T0005895.1 MGP_CBAJ_G0004933.1 mouse_genomes_project 1 183674151 183674312 + Gm37923 lincRNA lincRNA MGP_CBAJ_T0020580.1 MGP_CBAJ_G0015952.1 mouse_genomes_project 1 86904246 86983547 - MGP_CBAJ_P0020580 Cul3 protein_coding protein_coding MGP_CBAJ_T0020581.1 MGP_CBAJ_G0015952.1 mouse_genomes_project 1 86906145 86983378 - MGP_CBAJ_P0020581 Cul3 protein_coding protein_coding MGP_CBAJ_T0020582.1 MGP_CBAJ_G0015952.1 mouse_genomes_project 1 86906269 86916777 - MGP_CBAJ_P0020582 Cul3 protein_coding protein_coding MGP_CBAJ_T0020583.1 MGP_CBAJ_G0015952.1 mouse_genomes_project 1 86906564 86915901 - Cul3 protein_coding retained_intron MGP_CBAJ_T0020584.1 MGP_CBAJ_G0015952.1 mouse_genomes_project 1 86926367 86983374 - MGP_CBAJ_P0020584 Cul3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020585.1 MGP_CBAJ_G0015952.1 mouse_genomes_project 1 86928137 86983346 - MGP_CBAJ_P0020585 Cul3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021363.1 MGP_CBAJ_G0016127.1 mouse_genomes_project 1 126952200 127963385 + MGP_CBAJ_P0021363 Cntnap5a protein_coding protein_coding MGP_CBAJ_T0021364.1 MGP_CBAJ_G0016127.1 mouse_genomes_project 1 126952581 127956738 + MGP_CBAJ_P0021364 Cntnap5a protein_coding unknown_likely_coding MGP_CBAJ_T0011728.1 MGP_CBAJ_G0009840.1 mouse_genomes_project 1 2581811 2582663 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0021357.1 MGP_CBAJ_G0016125.1 mouse_genomes_project 1 121547217 121646603 - MGP_CBAJ_P0021357 Cdh19 protein_coding protein_coding MGP_CBAJ_T0021358.1 MGP_CBAJ_G0016125.1 mouse_genomes_project 1 121616116 121646824 - Cdh19 protein_coding processed_transcript MGP_CBAJ_T0005579.1 MGP_CBAJ_G0004691.1 mouse_genomes_project 1 24465133 24466901 - Gm28237 lincRNA lincRNA MGP_CBAJ_T0005580.1 MGP_CBAJ_G0004691.1 mouse_genomes_project 1 24465920 24467083 - Gm28237 lincRNA lincRNA MGP_CBAJ_T0005591.1 MGP_CBAJ_G0004701.1 mouse_genomes_project 1 36577156 36602795 - Gm37068 lincRNA lincRNA MGP_CBAJ_T0101484.1 MGP_CBAJ_G0039516.1 mouse_genomes_project 1 143834115 143852149 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0009433.1 MGP_CBAJ_G0007571.1 mouse_genomes_project 1 186866625 186866741 - Mir6354 miRNA miRNA MGP_CBAJ_T0022648.1 MGP_CBAJ_G0016386.1 mouse_genomes_project 1 177943458 177949252 + Serpinc1 protein_coding retained_intron MGP_CBAJ_T0022649.1 MGP_CBAJ_G0016386.1 mouse_genomes_project 1 177943479 177972128 + MGP_CBAJ_P0022649 Serpinc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022650.1 MGP_CBAJ_G0016386.1 mouse_genomes_project 1 177943519 177981045 + MGP_CBAJ_P0022650 Serpinc1 protein_coding protein_coding MGP_CBAJ_T0022651.1 MGP_CBAJ_G0016386.1 mouse_genomes_project 1 177943525 177966062 + MGP_CBAJ_P0022651 Serpinc1 protein_coding protein_coding MGP_CBAJ_T0022652.1 MGP_CBAJ_G0016386.1 mouse_genomes_project 1 177943561 177957298 + MGP_CBAJ_P0022652 Serpinc1 protein_coding protein_coding MGP_CBAJ_T0022653.1 MGP_CBAJ_G0016386.1 mouse_genomes_project 1 177952417 177972157 + MGP_CBAJ_P0022653 Serpinc1 protein_coding protein_coding MGP_CBAJ_T0022654.1 MGP_CBAJ_G0016386.1 mouse_genomes_project 1 177954726 177957388 + Serpinc1 protein_coding retained_intron MGP_CBAJ_T0022655.1 MGP_CBAJ_G0016386.1 mouse_genomes_project 1 177957016 177977641 + MGP_CBAJ_P0022655 Serpinc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0000578.1 MGP_CBAJ_G0000520.1 mouse_genomes_project 1 140720257 140726133 - TEC TEC MGP_CBAJ_T0021808.1 MGP_CBAJ_G0016222.1 mouse_genomes_project 1 146671056 146728181 + MGP_CBAJ_P0021808 Plekha6 protein_coding protein_coding MGP_CBAJ_T0021809.1 MGP_CBAJ_G0016222.1 mouse_genomes_project 1 146681645 146691374 + MGP_CBAJ_P0021809 Plekha6 protein_coding unknown_likely_coding MGP_CBAJ_T0021810.1 MGP_CBAJ_G0016222.1 mouse_genomes_project 1 146681645 146723781 + MGP_CBAJ_P0021810 Plekha6 protein_coding protein_coding MGP_CBAJ_T0021811.1 MGP_CBAJ_G0016222.1 mouse_genomes_project 1 146683646 146725962 + MGP_CBAJ_P0021811 Plekha6 protein_coding protein_coding MGP_CBAJ_T0021812.1 MGP_CBAJ_G0016222.1 mouse_genomes_project 1 146694067 146696951 + Plekha6 protein_coding processed_transcript MGP_CBAJ_T0021813.1 MGP_CBAJ_G0016222.1 mouse_genomes_project 1 146698864 146706428 + MGP_CBAJ_P0021813 Plekha6 protein_coding protein_coding MGP_CBAJ_T0021814.1 MGP_CBAJ_G0016222.1 mouse_genomes_project 1 146698870 146709603 + MGP_CBAJ_P0021814 Plekha6 protein_coding protein_coding MGP_CBAJ_T0021815.1 MGP_CBAJ_G0016222.1 mouse_genomes_project 1 146716506 146718982 + Plekha6 protein_coding retained_intron MGP_CBAJ_T0021816.1 MGP_CBAJ_G0016222.1 mouse_genomes_project 1 146722694 146726363 + Plekha6 protein_coding retained_intron MGP_CBAJ_T0000583.1 MGP_CBAJ_G0000525.1 mouse_genomes_project 1 142218641 142221138 + TEC TEC MGP_CBAJ_T0012170.1 MGP_CBAJ_G0010282.1 mouse_genomes_project 1 178918396 178919600 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005945.1 MGP_CBAJ_G0004970.1 mouse_genomes_project 1 204883597 204890084 + 4930488B22Rik lincRNA lincRNA MGP_CBAJ_T0002723.1 MGP_CBAJ_G0002588.1 mouse_genomes_project 1 41636273 41649255 - Gm16894 antisense antisense MGP_CBAJ_T0023676.1 MGP_CBAJ_G0016628.1 mouse_genomes_project 1 202256493 202287857 - MGP_CBAJ_P0023676 Fbxo28 protein_coding protein_coding MGP_CBAJ_T0023677.1 MGP_CBAJ_G0016628.1 mouse_genomes_project 1 202258579 202261779 - Fbxo28 protein_coding retained_intron MGP_CBAJ_T0023678.1 MGP_CBAJ_G0016628.1 mouse_genomes_project 1 202259854 202287839 - MGP_CBAJ_P0023678 Fbxo28 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023679.1 MGP_CBAJ_G0016628.1 mouse_genomes_project 1 202260382 202287810 - MGP_CBAJ_P0023679 Fbxo28 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023680.1 MGP_CBAJ_G0016628.1 mouse_genomes_project 1 202260635 202287868 - MGP_CBAJ_P0023680 Fbxo28 protein_coding nonsense_mediated_decay MGP_CBAJ_T0098574.1 MGP_CBAJ_G0036829.1 mouse_genomes_project 1 159865002 159865108 - Gm22681 snRNA snRNA MGP_CBAJ_T0022396.1 MGP_CBAJ_G0016343.1 mouse_genomes_project 1 169884764 169918921 - MGP_CBAJ_P0022396 Rgsl1 protein_coding protein_coding MGP_CBAJ_T0022397.1 MGP_CBAJ_G0016343.1 mouse_genomes_project 1 169884769 169966687 - MGP_CBAJ_P0022397 Rgsl1 protein_coding protein_coding MGP_CBAJ_T0022398.1 MGP_CBAJ_G0016343.1 mouse_genomes_project 1 169884775 169941006 - MGP_CBAJ_P0022398 Rgsl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022399.1 MGP_CBAJ_G0016343.1 mouse_genomes_project 1 169887071 169896169 - Rgsl1 protein_coding processed_transcript MGP_CBAJ_T0022400.1 MGP_CBAJ_G0016343.1 mouse_genomes_project 1 169887072 169966659 - MGP_CBAJ_P0022400 Rgsl1 protein_coding unknown_likely_coding MGP_CBAJ_T0022401.1 MGP_CBAJ_G0016343.1 mouse_genomes_project 1 169890562 169966679 - MGP_CBAJ_P0022401 Rgsl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022402.1 MGP_CBAJ_G0016343.1 mouse_genomes_project 1 169898019 169934667 - Rgsl1 protein_coding retained_intron MGP_CBAJ_T0022403.1 MGP_CBAJ_G0016343.1 mouse_genomes_project 1 169907850 169924595 - Rgsl1 protein_coding processed_transcript MGP_CBAJ_T0011902.1 MGP_CBAJ_G0010014.1 mouse_genomes_project 1 58086098 58086677 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005821.1 MGP_CBAJ_G0004876.1 mouse_genomes_project 1 148308454 148312694 - Gm26783 lincRNA lincRNA MGP_CBAJ_T0098542.1 MGP_CBAJ_G0036797.1 mouse_genomes_project 1 78015521 78015712 + Gm24497 snRNA snRNA MGP_CBAJ_T0005852.1 MGP_CBAJ_G0004901.1 mouse_genomes_project 1 169807739 169826864 - C230024C17Rik lincRNA lincRNA MGP_CBAJ_T0000464.1 MGP_CBAJ_G0000406.1 mouse_genomes_project 1 69617379 69621747 + TEC TEC MGP_CBAJ_T0009390.1 MGP_CBAJ_G0007528.1 mouse_genomes_project 1 89006451 89006555 + Mir6344 miRNA miRNA MGP_CBAJ_T0011933.1 MGP_CBAJ_G0010045.1 mouse_genomes_project 1 66058733 66059123 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0022656.1 MGP_CBAJ_G0016387.1 mouse_genomes_project 1 177978093 178014296 - MGP_CBAJ_P0022656 Zbtb37 protein_coding protein_coding MGP_CBAJ_T0022657.1 MGP_CBAJ_G0016387.1 mouse_genomes_project 1 177983956 178014296 - MGP_CBAJ_P0022657 Zbtb37 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022658.1 MGP_CBAJ_G0016387.1 mouse_genomes_project 1 177983962 178014281 - MGP_CBAJ_P0022658 Zbtb37 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022659.1 MGP_CBAJ_G0016387.1 mouse_genomes_project 1 177992945 178013709 - MGP_CBAJ_P0022659 Zbtb37 protein_coding protein_coding MGP_CBAJ_T0022660.1 MGP_CBAJ_G0016387.1 mouse_genomes_project 1 177994449 178014295 - MGP_CBAJ_P0022660 Zbtb37 protein_coding protein_coding MGP_CBAJ_T0022661.1 MGP_CBAJ_G0016387.1 mouse_genomes_project 1 177994613 178013734 - MGP_CBAJ_P0022661 Zbtb37 protein_coding protein_coding MGP_CBAJ_T0022662.1 MGP_CBAJ_G0016387.1 mouse_genomes_project 1 178011885 178014263 - MGP_CBAJ_P0022662 Zbtb37 protein_coding protein_coding MGP_CBAJ_T0005829.1 MGP_CBAJ_G0004884.1 mouse_genomes_project 1 150576072 150597720 + Gm19705 lincRNA lincRNA MGP_CBAJ_T0005830.1 MGP_CBAJ_G0004884.1 mouse_genomes_project 1 150581778 150590877 + Gm19705 lincRNA lincRNA MGP_CBAJ_T0005831.1 MGP_CBAJ_G0004884.1 mouse_genomes_project 1 150591544 150602045 + Gm19705 lincRNA lincRNA MGP_CBAJ_T0005832.1 MGP_CBAJ_G0004884.1 mouse_genomes_project 1 150591777 150602043 + Gm19705 lincRNA lincRNA MGP_CBAJ_T0022060.1 MGP_CBAJ_G0016278.1 mouse_genomes_project 1 149985678 150034331 + MGP_CBAJ_P0022060 Kif21b protein_coding protein_coding MGP_CBAJ_T0022061.1 MGP_CBAJ_G0016278.1 mouse_genomes_project 1 149985743 150006356 + Kif21b protein_coding retained_intron MGP_CBAJ_T0022062.1 MGP_CBAJ_G0016278.1 mouse_genomes_project 1 149986011 150030903 + MGP_CBAJ_P0022062 Kif21b protein_coding unknown_likely_coding MGP_CBAJ_T0022063.1 MGP_CBAJ_G0016278.1 mouse_genomes_project 1 150016676 150021363 + MGP_CBAJ_P0022063 Kif21b protein_coding nonsense_mediated_decay MGP_CBAJ_T0022064.1 MGP_CBAJ_G0016278.1 mouse_genomes_project 1 150019267 150021149 + Kif21b protein_coding retained_intron MGP_CBAJ_T0022065.1 MGP_CBAJ_G0016278.1 mouse_genomes_project 1 150025646 150028632 + Kif21b protein_coding processed_transcript MGP_CBAJ_T0019218.1 MGP_CBAJ_G0015700.1 mouse_genomes_project 1 40836568 40956157 - MGP_CBAJ_P0019218 Tbc1d8 protein_coding protein_coding MGP_CBAJ_T0019219.1 MGP_CBAJ_G0015700.1 mouse_genomes_project 1 40836943 40837510 - MGP_CBAJ_P0019219 Tbc1d8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019220.1 MGP_CBAJ_G0015700.1 mouse_genomes_project 1 40837372 40956063 - MGP_CBAJ_P0019220 Tbc1d8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019221.1 MGP_CBAJ_G0015700.1 mouse_genomes_project 1 40838392 40956102 - MGP_CBAJ_P0019221 Tbc1d8 protein_coding protein_coding MGP_CBAJ_T0019222.1 MGP_CBAJ_G0015700.1 mouse_genomes_project 1 40859037 40860471 - Tbc1d8 protein_coding retained_intron MGP_CBAJ_T0023334.1 MGP_CBAJ_G0016541.1 mouse_genomes_project 1 191680316 191686243 - MGP_CBAJ_P0023334 Fcer1a protein_coding protein_coding MGP_CBAJ_T0023335.1 MGP_CBAJ_G0016541.1 mouse_genomes_project 1 191680425 191686223 - MGP_CBAJ_P0023335 Fcer1a protein_coding protein_coding MGP_CBAJ_T0011936.1 MGP_CBAJ_G0010048.1 mouse_genomes_project 1 67274914 67276001 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023558.1 MGP_CBAJ_G0016603.1 mouse_genomes_project 1 199820168 199823565 - Psen2 protein_coding processed_transcript MGP_CBAJ_T0023559.1 MGP_CBAJ_G0016603.1 mouse_genomes_project 1 199820168 199855365 - MGP_CBAJ_P0023559 Psen2 protein_coding protein_coding MGP_CBAJ_T0023560.1 MGP_CBAJ_G0016603.1 mouse_genomes_project 1 199820168 199852094 - MGP_CBAJ_P0023560 Psen2 protein_coding protein_coding MGP_CBAJ_T0023561.1 MGP_CBAJ_G0016603.1 mouse_genomes_project 1 199820170 199823068 - Psen2 protein_coding retained_intron MGP_CBAJ_T0023562.1 MGP_CBAJ_G0016603.1 mouse_genomes_project 1 199820170 199844783 - MGP_CBAJ_P0023562 Psen2 protein_coding protein_coding MGP_CBAJ_T0023563.1 MGP_CBAJ_G0016603.1 mouse_genomes_project 1 199820553 199823562 - Psen2 protein_coding processed_transcript MGP_CBAJ_T0023564.1 MGP_CBAJ_G0016603.1 mouse_genomes_project 1 199820607 199846992 - MGP_CBAJ_P0023564 Psen2 protein_coding protein_coding MGP_CBAJ_T0023565.1 MGP_CBAJ_G0016603.1 mouse_genomes_project 1 199820610 199844590 - MGP_CBAJ_P0023565 Psen2 protein_coding protein_coding MGP_CBAJ_T0023566.1 MGP_CBAJ_G0016603.1 mouse_genomes_project 1 199820632 199823525 - Psen2 protein_coding processed_transcript MGP_CBAJ_T0023567.1 MGP_CBAJ_G0016603.1 mouse_genomes_project 1 199826081 199855309 - Psen2 protein_coding retained_intron MGP_CBAJ_T0023568.1 MGP_CBAJ_G0016603.1 mouse_genomes_project 1 199828731 199832744 - Psen2 protein_coding retained_intron MGP_CBAJ_T0023569.1 MGP_CBAJ_G0016603.1 mouse_genomes_project 1 199844470 199862606 - MGP_CBAJ_P0023569 Psen2 protein_coding protein_coding MGP_CBAJ_T0011981.1 MGP_CBAJ_G0010093.1 mouse_genomes_project 1 88368048 88371346 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0022956.1 MGP_CBAJ_G0016449.1 mouse_genomes_project 1 184275075 184294848 - MGP_CBAJ_P0022956 Fmo9 protein_coding protein_coding MGP_CBAJ_T0022957.1 MGP_CBAJ_G0016449.1 mouse_genomes_project 1 184276308 184290690 - MGP_CBAJ_P0022957 Fmo9 protein_coding protein_coding MGP_CBAJ_T0021763.1 MGP_CBAJ_G0016214.1 mouse_genomes_project 1 145816570 145846065 + MGP_CBAJ_P0021763 Rbbp5 protein_coding protein_coding MGP_CBAJ_T0021764.1 MGP_CBAJ_G0016214.1 mouse_genomes_project 1 145816640 145847234 + MGP_CBAJ_P0021764 Rbbp5 protein_coding protein_coding MGP_CBAJ_T0021765.1 MGP_CBAJ_G0016214.1 mouse_genomes_project 1 145816696 145829690 + MGP_CBAJ_P0021765 Rbbp5 protein_coding protein_coding MGP_CBAJ_T0021766.1 MGP_CBAJ_G0016214.1 mouse_genomes_project 1 145816714 145845361 + MGP_CBAJ_P0021766 Rbbp5 protein_coding protein_coding MGP_CBAJ_T0021767.1 MGP_CBAJ_G0016214.1 mouse_genomes_project 1 145816847 145829774 + MGP_CBAJ_P0021767 Rbbp5 protein_coding protein_coding MGP_CBAJ_T0021768.1 MGP_CBAJ_G0016214.1 mouse_genomes_project 1 145845301 145847230 + Rbbp5 protein_coding retained_intron MGP_CBAJ_T0019815.1 MGP_CBAJ_G0015812.1 mouse_genomes_project 1 64045486 64176799 + MGP_CBAJ_P0019815 Bmpr2 protein_coding protein_coding MGP_CBAJ_T0019816.1 MGP_CBAJ_G0015812.1 mouse_genomes_project 1 64147479 64149433 + Bmpr2 protein_coding retained_intron MGP_CBAJ_T0019817.1 MGP_CBAJ_G0015812.1 mouse_genomes_project 1 64148558 64153277 + Bmpr2 protein_coding retained_intron MGP_CBAJ_T0012113.1 MGP_CBAJ_G0010225.1 mouse_genomes_project 1 152836385 152836707 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0020330.1 MGP_CBAJ_G0015914.1 mouse_genomes_project 1 81209108 81214236 + MGP_CBAJ_P0020330 Fam134a protein_coding nonsense_mediated_decay MGP_CBAJ_T0020331.1 MGP_CBAJ_G0015914.1 mouse_genomes_project 1 81209116 81214240 + MGP_CBAJ_P0020331 Fam134a protein_coding protein_coding MGP_CBAJ_T0020332.1 MGP_CBAJ_G0015914.1 mouse_genomes_project 1 81209124 81214236 + MGP_CBAJ_P0020332 Fam134a protein_coding protein_coding MGP_CBAJ_T0020333.1 MGP_CBAJ_G0015914.1 mouse_genomes_project 1 81209310 81210990 + MGP_CBAJ_P0020333 Fam134a protein_coding protein_coding MGP_CBAJ_T0020334.1 MGP_CBAJ_G0015914.1 mouse_genomes_project 1 81209495 81214234 + MGP_CBAJ_P0020334 Fam134a protein_coding protein_coding MGP_CBAJ_T0020335.1 MGP_CBAJ_G0015914.1 mouse_genomes_project 1 81209512 81210703 + MGP_CBAJ_P0020335 Fam134a protein_coding protein_coding MGP_CBAJ_T0020336.1 MGP_CBAJ_G0015914.1 mouse_genomes_project 1 81209708 81210435 + Fam134a protein_coding retained_intron MGP_CBAJ_T0020337.1 MGP_CBAJ_G0015914.1 mouse_genomes_project 1 81211629 81212088 + MGP_CBAJ_P0020337 Fam134a protein_coding protein_coding MGP_CBAJ_T0019835.1 MGP_CBAJ_G0015816.1 mouse_genomes_project 1 64457094 64530542 + MGP_CBAJ_P0019835 Carf protein_coding nonsense_mediated_decay MGP_CBAJ_T0019836.1 MGP_CBAJ_G0015816.1 mouse_genomes_project 1 64457111 64467882 + Carf protein_coding retained_intron MGP_CBAJ_T0019837.1 MGP_CBAJ_G0015816.1 mouse_genomes_project 1 64457111 64504208 + MGP_CBAJ_P0019837 Carf protein_coding protein_coding MGP_CBAJ_T0019838.1 MGP_CBAJ_G0015816.1 mouse_genomes_project 1 64460072 64463301 + Carf protein_coding retained_intron MGP_CBAJ_T0019839.1 MGP_CBAJ_G0015816.1 mouse_genomes_project 1 64464164 64538688 + MGP_CBAJ_P0019839 Carf protein_coding protein_coding MGP_CBAJ_T0019840.1 MGP_CBAJ_G0015816.1 mouse_genomes_project 1 64466901 64530239 + MGP_CBAJ_P0019840 Carf protein_coding protein_coding MGP_CBAJ_T0019841.1 MGP_CBAJ_G0015816.1 mouse_genomes_project 1 64466922 64530310 + MGP_CBAJ_P0019841 Carf protein_coding protein_coding MGP_CBAJ_T0019842.1 MGP_CBAJ_G0015816.1 mouse_genomes_project 1 64466922 64530310 + MGP_CBAJ_P0019842 Carf protein_coding nonsense_mediated_decay MGP_CBAJ_T0019843.1 MGP_CBAJ_G0015816.1 mouse_genomes_project 1 64517557 64521652 + Carf protein_coding retained_intron MGP_CBAJ_T0019844.1 MGP_CBAJ_G0015816.1 mouse_genomes_project 1 64519209 64527537 + MGP_CBAJ_P0019844 Carf protein_coding nonsense_mediated_decay MGP_CBAJ_T0002870.1 MGP_CBAJ_G0002699.1 mouse_genomes_project 1 182221416 182232747 - Gm32569 antisense antisense MGP_CBAJ_T0002871.1 MGP_CBAJ_G0002699.1 mouse_genomes_project 1 182221542 182326887 - Gm32569 antisense antisense MGP_CBAJ_T0005975.1 MGP_CBAJ_G0004995.1 mouse_genomes_project 1 215378714 215393331 - 4930503O07Rik lincRNA lincRNA MGP_CBAJ_T0021081.1 MGP_CBAJ_G0016064.1 mouse_genomes_project 1 100988499 100991264 - protein_coding retained_intron MGP_CBAJ_T0021082.1 MGP_CBAJ_G0016064.1 mouse_genomes_project 1 100988499 100993278 - MGP_CBAJ_P0021082 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021083.1 MGP_CBAJ_G0016064.1 mouse_genomes_project 1 100988499 100993340 - MGP_CBAJ_P0021083 protein_coding protein_coding MGP_CBAJ_T0021084.1 MGP_CBAJ_G0016064.1 mouse_genomes_project 1 100988499 100991919 - MGP_CBAJ_P0021084 protein_coding protein_coding MGP_CBAJ_T0021085.1 MGP_CBAJ_G0016064.1 mouse_genomes_project 1 100990724 100993340 - protein_coding retained_intron MGP_CBAJ_T0099791.1 MGP_CBAJ_G0038046.1 mouse_genomes_project 1 134728979 134729123 + Gm25771 snoRNA snoRNA MGP_CBAJ_T0012030.1 MGP_CBAJ_G0010142.1 mouse_genomes_project 1 111516348 111516584 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012021.1 MGP_CBAJ_G0010133.1 mouse_genomes_project 1 109381849 109382413 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005838.1 MGP_CBAJ_G0004889.1 mouse_genomes_project 1 152281177 152285646 - lincRNA lincRNA MGP_CBAJ_T0021318.1 MGP_CBAJ_G0016113.1 mouse_genomes_project 1 116955644 116989198 - MGP_CBAJ_P0021318 Vps4b protein_coding protein_coding MGP_CBAJ_T0021319.1 MGP_CBAJ_G0016113.1 mouse_genomes_project 1 116961015 116989259 - MGP_CBAJ_P0021319 Vps4b protein_coding protein_coding MGP_CBAJ_T0021320.1 MGP_CBAJ_G0016113.1 mouse_genomes_project 1 116968883 116974376 - Vps4b protein_coding retained_intron MGP_CBAJ_T0021321.1 MGP_CBAJ_G0016113.1 mouse_genomes_project 1 116971026 116972206 - Vps4b protein_coding retained_intron MGP_CBAJ_T0021322.1 MGP_CBAJ_G0016113.1 mouse_genomes_project 1 116977383 116982418 - Vps4b protein_coding processed_transcript MGP_CBAJ_T0021323.1 MGP_CBAJ_G0016113.1 mouse_genomes_project 1 116983568 116989108 - Vps4b protein_coding retained_intron MGP_CBAJ_T0011123.1 MGP_CBAJ_G0009261.1 mouse_genomes_project 1 75446617 75446892 - Gm22665 misc_RNA misc_RNA MGP_CBAJ_T0023769.1 MGP_CBAJ_G0016650.1 mouse_genomes_project 1 205586202 205614386 + MGP_CBAJ_P0023769 Bpnt1 protein_coding protein_coding MGP_CBAJ_T0023770.1 MGP_CBAJ_G0016650.1 mouse_genomes_project 1 205586226 205599765 + MGP_CBAJ_P0023770 Bpnt1 protein_coding protein_coding MGP_CBAJ_T0023771.1 MGP_CBAJ_G0016650.1 mouse_genomes_project 1 205586233 205612463 + MGP_CBAJ_P0023771 Bpnt1 protein_coding protein_coding MGP_CBAJ_T0023772.1 MGP_CBAJ_G0016650.1 mouse_genomes_project 1 205586260 205601240 + Bpnt1 protein_coding processed_transcript MGP_CBAJ_T0009449.1 MGP_CBAJ_G0007587.1 mouse_genomes_project 1 216282841 216282922 + Mir29b-2 miRNA miRNA MGP_CBAJ_T0000561.1 MGP_CBAJ_G0000503.1 mouse_genomes_project 1 134697122 134698289 + TEC TEC MGP_CBAJ_T0002732.1 MGP_CBAJ_G0002595.1 mouse_genomes_project 1 46836117 46843539 - 4930521E06Rik antisense antisense MGP_CBAJ_T0011831.1 MGP_CBAJ_G0009943.1 mouse_genomes_project 1 34399178 34399506 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0024027.1 MGP_CBAJ_G0016698.1 mouse_genomes_project 1 214372904 214373962 - MGP_CBAJ_P0024027 G0s2 protein_coding protein_coding MGP_CBAJ_T0012035.1 MGP_CBAJ_G0010147.1 mouse_genomes_project 1 114576934 114577713 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005971.1 MGP_CBAJ_G0004992.1 mouse_genomes_project 1 213914011 213915079 + 1700065J18Rik lincRNA lincRNA MGP_CBAJ_T0005972.1 MGP_CBAJ_G0004992.1 mouse_genomes_project 1 213914021 213915085 + 1700065J18Rik lincRNA lincRNA MGP_CBAJ_T0022117.1 MGP_CBAJ_G0016289.1 mouse_genomes_project 1 152607892 152708128 - MGP_CBAJ_P0022117 Nek7 protein_coding protein_coding MGP_CBAJ_T0022118.1 MGP_CBAJ_G0016289.1 mouse_genomes_project 1 152639448 152762068 - Nek7 protein_coding retained_intron MGP_CBAJ_T0021139.1 MGP_CBAJ_G0016076.1 mouse_genomes_project 1 101572655 101641129 + MGP_CBAJ_P0021139 Crocc2 protein_coding protein_coding MGP_CBAJ_T0021140.1 MGP_CBAJ_G0016076.1 mouse_genomes_project 1 101583793 101638913 + MGP_CBAJ_P0021140 Crocc2 protein_coding unknown_likely_coding MGP_CBAJ_T0005807.1 MGP_CBAJ_G0004862.1 mouse_genomes_project 1 136922071 137300279 - lincRNA lincRNA MGP_CBAJ_T0005614.1 MGP_CBAJ_G0004719.1 mouse_genomes_project 1 44229198 44259903 - Gm28140 lincRNA lincRNA MGP_CBAJ_T0000705.1 MGP_CBAJ_G0000645.1 mouse_genomes_project 1 189934332 189936070 + TEC TEC MGP_CBAJ_T0021880.1 MGP_CBAJ_G0016241.1 mouse_genomes_project 1 147790168 147803442 + MGP_CBAJ_P0021880 Chil1 protein_coding protein_coding MGP_CBAJ_T0021881.1 MGP_CBAJ_G0016241.1 mouse_genomes_project 1 147790396 147803435 + MGP_CBAJ_P0021881 Chil1 protein_coding protein_coding MGP_CBAJ_T0021882.1 MGP_CBAJ_G0016241.1 mouse_genomes_project 1 147790396 147803587 + MGP_CBAJ_P0021882 Chil1 protein_coding protein_coding MGP_CBAJ_T0021883.1 MGP_CBAJ_G0016241.1 mouse_genomes_project 1 147790466 147799964 + MGP_CBAJ_P0021883 Chil1 protein_coding protein_coding MGP_CBAJ_T0021884.1 MGP_CBAJ_G0016241.1 mouse_genomes_project 1 147790473 147799974 + MGP_CBAJ_P0021884 Chil1 protein_coding protein_coding MGP_CBAJ_T0021885.1 MGP_CBAJ_G0016241.1 mouse_genomes_project 1 147790474 147800251 + Chil1 protein_coding retained_intron MGP_CBAJ_T0021886.1 MGP_CBAJ_G0016241.1 mouse_genomes_project 1 147791794 147800033 + Chil1 protein_coding retained_intron MGP_CBAJ_T0021887.1 MGP_CBAJ_G0016241.1 mouse_genomes_project 1 147802531 147803433 + Chil1 protein_coding retained_intron MGP_CBAJ_T0009430.1 MGP_CBAJ_G0007568.1 mouse_genomes_project 1 184971072 184971173 + Mir6347 miRNA miRNA MGP_CBAJ_T0005735.1 MGP_CBAJ_G0004803.1 mouse_genomes_project 1 96427564 96440268 + Gm19589 lincRNA lincRNA MGP_CBAJ_T0012142.1 MGP_CBAJ_G0010254.1 mouse_genomes_project 1 166250330 166250690 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000370.1 MGP_CBAJ_G0000314.1 mouse_genomes_project 1 23370472 23370862 + TEC TEC MGP_CBAJ_T0000371.1 MGP_CBAJ_G0000314.1 mouse_genomes_project 1 23370474 23370862 + TEC TEC MGP_CBAJ_T0020602.1 MGP_CBAJ_G0015955.1 mouse_genomes_project 1 89114855 89178672 - MGP_CBAJ_P0020602 Irs1 protein_coding protein_coding MGP_CBAJ_T0021074.1 MGP_CBAJ_G0016058.1 mouse_genomes_project 1 100848472 100855893 - MGP_CBAJ_P0021074 protein_coding protein_coding MGP_CBAJ_T0000672.1 MGP_CBAJ_G0000612.1 mouse_genomes_project 1 176122135 176122547 - TEC TEC MGP_CBAJ_T0011764.1 MGP_CBAJ_G0009876.1 mouse_genomes_project 1 10589999 10591561 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005775.1 MGP_CBAJ_G0004838.1 mouse_genomes_project 1 116284871 116303824 - Gm20753 lincRNA lincRNA MGP_CBAJ_T0023743.1 MGP_CBAJ_G0016644.1 mouse_genomes_project 1 204967548 204991792 - MGP_CBAJ_P0023743 Marc1 protein_coding protein_coding MGP_CBAJ_T0023744.1 MGP_CBAJ_G0016644.1 mouse_genomes_project 1 204968487 204991608 - MGP_CBAJ_P0023744 Marc1 protein_coding protein_coding MGP_CBAJ_T0019680.1 MGP_CBAJ_G0015792.1 mouse_genomes_project 1 62394875 62410488 - Clk1 protein_coding retained_intron MGP_CBAJ_T0019681.1 MGP_CBAJ_G0015792.1 mouse_genomes_project 1 62396686 62397548 - Clk1 protein_coding processed_transcript MGP_CBAJ_T0019682.1 MGP_CBAJ_G0015792.1 mouse_genomes_project 1 62396686 62398124 - Clk1 protein_coding processed_transcript MGP_CBAJ_T0019683.1 MGP_CBAJ_G0015792.1 mouse_genomes_project 1 62396686 62401460 - Clk1 protein_coding retained_intron MGP_CBAJ_T0019684.1 MGP_CBAJ_G0015792.1 mouse_genomes_project 1 62396686 62410488 - MGP_CBAJ_P0019684 Clk1 protein_coding protein_coding MGP_CBAJ_T0019685.1 MGP_CBAJ_G0015792.1 mouse_genomes_project 1 62396686 62410488 - MGP_CBAJ_P0019685 Clk1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019686.1 MGP_CBAJ_G0015792.1 mouse_genomes_project 1 62396686 62410488 - MGP_CBAJ_P0019686 Clk1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019687.1 MGP_CBAJ_G0015792.1 mouse_genomes_project 1 62397002 62398512 - Clk1 protein_coding processed_transcript MGP_CBAJ_T0019688.1 MGP_CBAJ_G0015792.1 mouse_genomes_project 1 62399276 62404898 - Clk1 protein_coding retained_intron MGP_CBAJ_T0019689.1 MGP_CBAJ_G0015792.1 mouse_genomes_project 1 62399301 62405759 - Clk1 protein_coding retained_intron MGP_CBAJ_T0019690.1 MGP_CBAJ_G0015792.1 mouse_genomes_project 1 62400836 62410488 - Clk1 protein_coding retained_intron MGP_CBAJ_T0019691.1 MGP_CBAJ_G0015792.1 mouse_genomes_project 1 62401604 62402121 - Clk1 protein_coding retained_intron MGP_CBAJ_T0019692.1 MGP_CBAJ_G0015792.1 mouse_genomes_project 1 62406124 62410488 - Clk1 protein_coding retained_intron MGP_CBAJ_T0005595.1 MGP_CBAJ_G0004705.1 mouse_genomes_project 1 36990566 37001505 - Gm33222 lincRNA lincRNA MGP_CBAJ_T0005596.1 MGP_CBAJ_G0004705.1 mouse_genomes_project 1 36990649 37001451 - Gm33222 lincRNA lincRNA MGP_CBAJ_T0021590.1 MGP_CBAJ_G0016172.1 mouse_genomes_project 1 141160283 141220387 - MGP_CBAJ_P0021590 Dars protein_coding protein_coding MGP_CBAJ_T0021591.1 MGP_CBAJ_G0016172.1 mouse_genomes_project 1 141175907 141180435 - Dars protein_coding retained_intron MGP_CBAJ_T0021592.1 MGP_CBAJ_G0016172.1 mouse_genomes_project 1 141215145 141220396 - MGP_CBAJ_P0021592 Dars protein_coding protein_coding MGP_CBAJ_T0011808.1 MGP_CBAJ_G0009920.1 mouse_genomes_project 1 27875281 27877154 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0019619.1 MGP_CBAJ_G0015780.1 mouse_genomes_project 1 60608615 60805189 - MGP_CBAJ_P0019619 Satb2 protein_coding protein_coding MGP_CBAJ_T0019620.1 MGP_CBAJ_G0015780.1 mouse_genomes_project 1 60608620 60804545 - MGP_CBAJ_P0019620 Satb2 protein_coding protein_coding MGP_CBAJ_T0019621.1 MGP_CBAJ_G0015780.1 mouse_genomes_project 1 60608622 60802557 - MGP_CBAJ_P0019621 Satb2 protein_coding protein_coding MGP_CBAJ_T0019622.1 MGP_CBAJ_G0015780.1 mouse_genomes_project 1 60778375 60802525 - MGP_CBAJ_P0019622 Satb2 protein_coding protein_coding MGP_CBAJ_T0019623.1 MGP_CBAJ_G0015780.1 mouse_genomes_project 1 60802424 60811321 - MGP_CBAJ_P0019623 Satb2 protein_coding protein_coding MGP_CBAJ_T0012152.1 MGP_CBAJ_G0010264.1 mouse_genomes_project 1 170511414 170511967 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011748.1 MGP_CBAJ_G0009860.1 mouse_genomes_project 1 6494036 6494375 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011989.1 MGP_CBAJ_G0010101.1 mouse_genomes_project 1 90175712 90176746 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012154.1 MGP_CBAJ_G0010266.1 mouse_genomes_project 1 171446940 171447521 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009412.1 MGP_CBAJ_G0007550.1 mouse_genomes_project 1 144733860 144734024 - Gm24273 miRNA miRNA MGP_CBAJ_T0002862.1 MGP_CBAJ_G0002694.1 mouse_genomes_project 1 179122781 179134262 + 2810442N19Rik antisense antisense MGP_CBAJ_T0002863.1 MGP_CBAJ_G0002694.1 mouse_genomes_project 1 179122984 179134271 + 2810442N19Rik antisense antisense MGP_CBAJ_T0011949.1 MGP_CBAJ_G0010061.1 mouse_genomes_project 1 70419104 70419412 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012088.1 MGP_CBAJ_G0010200.1 mouse_genomes_project 1 135493474 135496108 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000579.1 MGP_CBAJ_G0000521.1 mouse_genomes_project 1 140858170 140862051 - TEC TEC MGP_CBAJ_T0000399.1 MGP_CBAJ_G0000342.1 mouse_genomes_project 1 34351826 34354887 - TEC TEC MGP_CBAJ_T0000421.1 MGP_CBAJ_G0000363.1 mouse_genomes_project 1 40890168 40891053 - TEC TEC MGP_CBAJ_T0021374.1 MGP_CBAJ_G0016132.1 mouse_genomes_project 1 129989242 130001201 + MGP_CBAJ_P0021374 Nifk protein_coding protein_coding MGP_CBAJ_T0021375.1 MGP_CBAJ_G0016132.1 mouse_genomes_project 1 129989257 130000320 + MGP_CBAJ_P0021375 Nifk protein_coding protein_coding MGP_CBAJ_T0021376.1 MGP_CBAJ_G0016132.1 mouse_genomes_project 1 129989556 129996759 + MGP_CBAJ_P0021376 Nifk protein_coding protein_coding MGP_CBAJ_T0005771.1 MGP_CBAJ_G0004835.1 mouse_genomes_project 1 111543508 111545642 - Gm28187 lincRNA lincRNA MGP_CBAJ_T0000497.1 MGP_CBAJ_G0000439.1 mouse_genomes_project 1 87378724 87382378 - TEC TEC MGP_CBAJ_T0021820.1 MGP_CBAJ_G0016225.1 mouse_genomes_project 1 146734355 146753979 + MGP_CBAJ_P0021820 protein_coding protein_coding MGP_CBAJ_T0021821.1 MGP_CBAJ_G0016225.1 mouse_genomes_project 1 146734355 146754186 + MGP_CBAJ_P0021821 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021823.1 MGP_CBAJ_G0016225.1 mouse_genomes_project 1 146746191 146754186 + MGP_CBAJ_P0021823 protein_coding protein_coding MGP_CBAJ_T0021825.1 MGP_CBAJ_G0016225.1 mouse_genomes_project 1 146751493 146754007 + MGP_CBAJ_P0021825 protein_coding protein_coding MGP_CBAJ_T0019477.1 MGP_CBAJ_G0015750.1 mouse_genomes_project 1 55590319 55639090 - MGP_CBAJ_P0019477 Nab1 protein_coding protein_coding MGP_CBAJ_T0019478.1 MGP_CBAJ_G0015750.1 mouse_genomes_project 1 55590319 55638711 - MGP_CBAJ_P0019478 Nab1 protein_coding protein_coding MGP_CBAJ_T0019479.1 MGP_CBAJ_G0015750.1 mouse_genomes_project 1 55594771 55629147 - MGP_CBAJ_P0019479 Nab1 protein_coding protein_coding MGP_CBAJ_T0019480.1 MGP_CBAJ_G0015750.1 mouse_genomes_project 1 55594794 55602604 - Nab1 protein_coding retained_intron MGP_CBAJ_T0019481.1 MGP_CBAJ_G0015750.1 mouse_genomes_project 1 55628720 55638726 - Nab1 protein_coding processed_transcript MGP_CBAJ_T0022104.1 MGP_CBAJ_G0016287.1 mouse_genomes_project 1 152138217 152200752 - Ptprc protein_coding retained_intron MGP_CBAJ_T0022105.1 MGP_CBAJ_G0016287.1 mouse_genomes_project 1 152138763 152266268 - MGP_CBAJ_P0022105 Ptprc protein_coding protein_coding MGP_CBAJ_T0022106.1 MGP_CBAJ_G0016287.1 mouse_genomes_project 1 152138769 152266229 - MGP_CBAJ_P0022106 Ptprc protein_coding protein_coding MGP_CBAJ_T0022107.1 MGP_CBAJ_G0016287.1 mouse_genomes_project 1 152138776 152266262 - MGP_CBAJ_P0022107 Ptprc protein_coding protein_coding MGP_CBAJ_T0022108.1 MGP_CBAJ_G0016287.1 mouse_genomes_project 1 152196340 152199785 - Ptprc protein_coding retained_intron MGP_CBAJ_T0022109.1 MGP_CBAJ_G0016287.1 mouse_genomes_project 1 152196562 152266196 - MGP_CBAJ_P0022109 Ptprc protein_coding protein_coding MGP_CBAJ_T0022110.1 MGP_CBAJ_G0016287.1 mouse_genomes_project 1 152201647 152205029 - Ptprc protein_coding retained_intron MGP_CBAJ_T0022111.1 MGP_CBAJ_G0016287.1 mouse_genomes_project 1 152202148 152266262 - MGP_CBAJ_P0022111 Ptprc protein_coding protein_coding MGP_CBAJ_T0022112.1 MGP_CBAJ_G0016287.1 mouse_genomes_project 1 152203781 152266261 - Ptprc protein_coding retained_intron MGP_CBAJ_T0022113.1 MGP_CBAJ_G0016287.1 mouse_genomes_project 1 152216576 152266663 - Ptprc protein_coding retained_intron MGP_CBAJ_T0022114.1 MGP_CBAJ_G0016287.1 mouse_genomes_project 1 152262938 152266151 - Ptprc protein_coding retained_intron MGP_CBAJ_T0022115.1 MGP_CBAJ_G0016287.1 mouse_genomes_project 1 152263705 152266211 - Ptprc protein_coding retained_intron MGP_CBAJ_T0000659.1 MGP_CBAJ_G0000599.1 mouse_genomes_project 1 172829455 172832048 + TEC TEC MGP_CBAJ_T0000756.1 MGP_CBAJ_G0000694.1 mouse_genomes_project 1 210390841 210391726 - TEC TEC MGP_CBAJ_T0012081.1 MGP_CBAJ_G0010193.1 mouse_genomes_project 1 133556746 133557211 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101443.1 MGP_CBAJ_G0039475.1 mouse_genomes_project 1 20327746 20333201 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0002857.1 MGP_CBAJ_G0002690.1 mouse_genomes_project 1 178010055 178010924 + Gm37362 antisense antisense MGP_CBAJ_T0023345.1 MGP_CBAJ_G0016545.1 mouse_genomes_project 1 191865918 191987119 + MGP_CBAJ_P0023345 Aim2 protein_coding protein_coding MGP_CBAJ_T0023346.1 MGP_CBAJ_G0016545.1 mouse_genomes_project 1 191938370 191946935 + Aim2 protein_coding processed_transcript MGP_CBAJ_T0023347.1 MGP_CBAJ_G0016545.1 mouse_genomes_project 1 191939782 191980858 + MGP_CBAJ_P0023347 Aim2 protein_coding protein_coding MGP_CBAJ_T0023348.1 MGP_CBAJ_G0016545.1 mouse_genomes_project 1 191976123 191976748 + MGP_CBAJ_P0023348 Aim2 protein_coding protein_coding MGP_CBAJ_T0023349.1 MGP_CBAJ_G0016545.1 mouse_genomes_project 1 191976506 191983145 + Aim2 protein_coding processed_transcript MGP_CBAJ_T0023350.1 MGP_CBAJ_G0016545.1 mouse_genomes_project 1 191976506 191987111 + MGP_CBAJ_P0023350 Aim2 protein_coding protein_coding MGP_CBAJ_T0023351.1 MGP_CBAJ_G0016545.1 mouse_genomes_project 1 191976640 191977318 + Aim2 protein_coding processed_transcript MGP_CBAJ_T0021651.1 MGP_CBAJ_G0016191.1 mouse_genomes_project 1 144382312 144386451 + Eif2d protein_coding retained_intron MGP_CBAJ_T0021652.1 MGP_CBAJ_G0016191.1 mouse_genomes_project 1 144382312 144407181 + MGP_CBAJ_P0021652 Eif2d protein_coding protein_coding MGP_CBAJ_T0021653.1 MGP_CBAJ_G0016191.1 mouse_genomes_project 1 144382312 144413312 + MGP_CBAJ_P0021653 Eif2d protein_coding nonsense_mediated_decay MGP_CBAJ_T0021654.1 MGP_CBAJ_G0016191.1 mouse_genomes_project 1 144382312 144405942 + MGP_CBAJ_P0021654 Eif2d protein_coding protein_coding MGP_CBAJ_T0021655.1 MGP_CBAJ_G0016191.1 mouse_genomes_project 1 144382312 144413726 + MGP_CBAJ_P0021655 Eif2d protein_coding protein_coding MGP_CBAJ_T0021656.1 MGP_CBAJ_G0016191.1 mouse_genomes_project 1 144382312 144408555 + MGP_CBAJ_P0021656 Eif2d protein_coding nonsense_mediated_decay MGP_CBAJ_T0021657.1 MGP_CBAJ_G0016191.1 mouse_genomes_project 1 144382312 144420977 + MGP_CBAJ_P0021657 Eif2d protein_coding nonsense_mediated_decay MGP_CBAJ_T0021658.1 MGP_CBAJ_G0016191.1 mouse_genomes_project 1 144400081 144405213 + Eif2d protein_coding processed_transcript MGP_CBAJ_T0098173.1 MGP_CBAJ_G0036446.1 mouse_genomes_project 1 95410899 95411171 + Gm25395 scaRNA scaRNA MGP_CBAJ_T0005948.1 MGP_CBAJ_G0004973.1 mouse_genomes_project 1 205301059 205308610 + Gm37662 lincRNA lincRNA MGP_CBAJ_T0016726.1 MGP_CBAJ_G0014830.1 mouse_genomes_project 1 37639282 37641283 + D430040D24Rik processed_transcript retained_intron MGP_CBAJ_T0016727.1 MGP_CBAJ_G0014830.1 mouse_genomes_project 1 37639940 37647245 + D430040D24Rik processed_transcript antisense MGP_CBAJ_T0019286.1 MGP_CBAJ_G0015715.1 mouse_genomes_project 1 42445142 42469022 - MGP_CBAJ_P0019286 Mfsd9 protein_coding protein_coding MGP_CBAJ_T0019287.1 MGP_CBAJ_G0015715.1 mouse_genomes_project 1 42445145 42469046 - MGP_CBAJ_P0019287 Mfsd9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019288.1 MGP_CBAJ_G0015715.1 mouse_genomes_project 1 42456955 42469016 - Mfsd9 protein_coding retained_intron MGP_CBAJ_T0011847.1 MGP_CBAJ_G0009959.1 mouse_genomes_project 1 39828974 39829503 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000320.1 MGP_CBAJ_G0000265.1 mouse_genomes_project 1 440140 442958 - TEC TEC MGP_CBAJ_T0009381.1 MGP_CBAJ_G0007519.1 mouse_genomes_project 1 72864102 72864180 + Gm22548 miRNA miRNA MGP_CBAJ_T0000524.1 MGP_CBAJ_G0000466.1 mouse_genomes_project 1 95566785 95573141 + TEC TEC MGP_CBAJ_T0101496.1 MGP_CBAJ_G0039528.1 mouse_genomes_project 1 191603883 191605066 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0002776.1 MGP_CBAJ_G0002626.1 mouse_genomes_project 1 93301076 93305160 - Gm28884 antisense antisense MGP_CBAJ_T0021348.1 MGP_CBAJ_G0016124.1 mouse_genomes_project 1 120551364 120564971 + MGP_CBAJ_P0021348 Cdh7 protein_coding protein_coding MGP_CBAJ_T0021349.1 MGP_CBAJ_G0016124.1 mouse_genomes_project 1 120551643 120726188 + MGP_CBAJ_P0021349 Cdh7 protein_coding protein_coding MGP_CBAJ_T0021350.1 MGP_CBAJ_G0016124.1 mouse_genomes_project 1 120551914 120564315 + MGP_CBAJ_P0021350 Cdh7 protein_coding protein_coding MGP_CBAJ_T0021351.1 MGP_CBAJ_G0016124.1 mouse_genomes_project 1 120551939 120563374 + MGP_CBAJ_P0021351 Cdh7 protein_coding protein_coding MGP_CBAJ_T0021352.1 MGP_CBAJ_G0016124.1 mouse_genomes_project 1 120552162 120725238 + MGP_CBAJ_P0021352 Cdh7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021353.1 MGP_CBAJ_G0016124.1 mouse_genomes_project 1 120552214 120567680 + MGP_CBAJ_P0021353 Cdh7 protein_coding protein_coding MGP_CBAJ_T0021354.1 MGP_CBAJ_G0016124.1 mouse_genomes_project 1 120552670 120725044 + MGP_CBAJ_P0021354 Cdh7 protein_coding protein_coding MGP_CBAJ_T0021355.1 MGP_CBAJ_G0016124.1 mouse_genomes_project 1 120562973 120725232 + MGP_CBAJ_P0021355 Cdh7 protein_coding protein_coding MGP_CBAJ_T0021356.1 MGP_CBAJ_G0016124.1 mouse_genomes_project 1 120682414 120724101 + MGP_CBAJ_P0021356 Cdh7 protein_coding protein_coding MGP_CBAJ_T0000620.1 MGP_CBAJ_G0000560.1 mouse_genomes_project 1 152033308 152034474 + TEC TEC MGP_CBAJ_T0005613.1 MGP_CBAJ_G0004718.1 mouse_genomes_project 1 44158662 44159061 + lincRNA lincRNA MGP_CBAJ_T0019585.1 MGP_CBAJ_G0015771.1 mouse_genomes_project 1 58640310 58663150 + MGP_CBAJ_P0019585 Coq10b protein_coding protein_coding MGP_CBAJ_T0019586.1 MGP_CBAJ_G0015771.1 mouse_genomes_project 1 58640310 58662401 + MGP_CBAJ_P0019586 Coq10b protein_coding protein_coding MGP_CBAJ_T0019587.1 MGP_CBAJ_G0015771.1 mouse_genomes_project 1 58640409 58641634 + Coq10b protein_coding retained_intron MGP_CBAJ_T0019588.1 MGP_CBAJ_G0015771.1 mouse_genomes_project 1 58650086 58652205 + Coq10b protein_coding retained_intron MGP_CBAJ_T0019235.1 MGP_CBAJ_G0015706.1 mouse_genomes_project 1 41442946 41583880 + MGP_CBAJ_P0019235 Map4k4 protein_coding protein_coding MGP_CBAJ_T0019236.1 MGP_CBAJ_G0015706.1 mouse_genomes_project 1 41442946 41583880 + MGP_CBAJ_P0019236 Map4k4 protein_coding protein_coding MGP_CBAJ_T0019237.1 MGP_CBAJ_G0015706.1 mouse_genomes_project 1 41443203 41444490 + Map4k4 protein_coding retained_intron MGP_CBAJ_T0019238.1 MGP_CBAJ_G0015706.1 mouse_genomes_project 1 41443203 41547873 + MGP_CBAJ_P0019238 Map4k4 protein_coding protein_coding MGP_CBAJ_T0019239.1 MGP_CBAJ_G0015706.1 mouse_genomes_project 1 41443212 41582324 + MGP_CBAJ_P0019239 Map4k4 protein_coding protein_coding MGP_CBAJ_T0019240.1 MGP_CBAJ_G0015706.1 mouse_genomes_project 1 41443212 41582324 + MGP_CBAJ_P0019240 Map4k4 protein_coding protein_coding MGP_CBAJ_T0019241.1 MGP_CBAJ_G0015706.1 mouse_genomes_project 1 41443213 41582324 + MGP_CBAJ_P0019241 Map4k4 protein_coding protein_coding MGP_CBAJ_T0019242.1 MGP_CBAJ_G0015706.1 mouse_genomes_project 1 41443257 41582539 + MGP_CBAJ_P0019242 Map4k4 protein_coding protein_coding MGP_CBAJ_T0019243.1 MGP_CBAJ_G0015706.1 mouse_genomes_project 1 41443263 41582495 + MGP_CBAJ_P0019243 Map4k4 protein_coding protein_coding MGP_CBAJ_T0019244.1 MGP_CBAJ_G0015706.1 mouse_genomes_project 1 41512124 41539488 + Map4k4 protein_coding processed_transcript MGP_CBAJ_T0019245.1 MGP_CBAJ_G0015706.1 mouse_genomes_project 1 41512819 41533086 + Map4k4 protein_coding processed_transcript MGP_CBAJ_T0019246.1 MGP_CBAJ_G0015706.1 mouse_genomes_project 1 41557164 41558131 + Map4k4 protein_coding retained_intron MGP_CBAJ_T0019247.1 MGP_CBAJ_G0015706.1 mouse_genomes_project 1 41557462 41564312 + MGP_CBAJ_P0019247 Map4k4 protein_coding protein_coding MGP_CBAJ_T0019248.1 MGP_CBAJ_G0015706.1 mouse_genomes_project 1 41557463 41562480 + MGP_CBAJ_P0019248 Map4k4 protein_coding protein_coding MGP_CBAJ_T0019249.1 MGP_CBAJ_G0015706.1 mouse_genomes_project 1 41558246 41568227 + MGP_CBAJ_P0019249 Map4k4 protein_coding protein_coding MGP_CBAJ_T0019250.1 MGP_CBAJ_G0015706.1 mouse_genomes_project 1 41564962 41566899 + Map4k4 protein_coding retained_intron MGP_CBAJ_T0019251.1 MGP_CBAJ_G0015706.1 mouse_genomes_project 1 41571421 41572268 + Map4k4 protein_coding retained_intron MGP_CBAJ_T0019252.1 MGP_CBAJ_G0015706.1 mouse_genomes_project 1 41580779 41581995 + Map4k4 protein_coding retained_intron MGP_CBAJ_T0005839.1 MGP_CBAJ_G0004890.1 mouse_genomes_project 1 152787876 152829092 - Gm5833 lincRNA lincRNA MGP_CBAJ_T0005840.1 MGP_CBAJ_G0004890.1 mouse_genomes_project 1 152818426 152829080 - Gm5833 lincRNA lincRNA MGP_CBAJ_T0019234.1 MGP_CBAJ_G0015705.1 mouse_genomes_project 1 41333012 41334197 - MGP_CBAJ_P0019234 Gm3646 protein_coding protein_coding MGP_CBAJ_T0002727.1 MGP_CBAJ_G0002591.1 mouse_genomes_project 1 42444489 42463702 + Gm37915 antisense antisense MGP_CBAJ_T0018951.1 MGP_CBAJ_G0015651.1 mouse_genomes_project 1 35276078 35285585 + MGP_CBAJ_P0018951 Imp4 protein_coding protein_coding MGP_CBAJ_T0018952.1 MGP_CBAJ_G0015651.1 mouse_genomes_project 1 35276125 35278758 + Imp4 protein_coding retained_intron MGP_CBAJ_T0018953.1 MGP_CBAJ_G0015651.1 mouse_genomes_project 1 35276132 35280086 + MGP_CBAJ_P0018953 Imp4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018954.1 MGP_CBAJ_G0015651.1 mouse_genomes_project 1 35276132 35280617 + MGP_CBAJ_P0018954 Imp4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018955.1 MGP_CBAJ_G0015651.1 mouse_genomes_project 1 35276164 35280257 + Imp4 protein_coding processed_transcript MGP_CBAJ_T0018956.1 MGP_CBAJ_G0015651.1 mouse_genomes_project 1 35276180 35279685 + Imp4 protein_coding processed_transcript MGP_CBAJ_T0018957.1 MGP_CBAJ_G0015651.1 mouse_genomes_project 1 35276268 35280744 + MGP_CBAJ_P0018957 Imp4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018958.1 MGP_CBAJ_G0015651.1 mouse_genomes_project 1 35284475 35285167 + Imp4 protein_coding processed_transcript MGP_CBAJ_T0022044.1 MGP_CBAJ_G0016274.1 mouse_genomes_project 1 149785005 149797446 - MGP_CBAJ_P0022044 Igfn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022045.1 MGP_CBAJ_G0016274.1 mouse_genomes_project 1 149785012 149844048 - MGP_CBAJ_P0022045 Igfn1 protein_coding protein_coding MGP_CBAJ_T0022046.1 MGP_CBAJ_G0016274.1 mouse_genomes_project 1 149785451 149818590 - MGP_CBAJ_P0022046 Igfn1 protein_coding unknown_likely_coding MGP_CBAJ_T0022047.1 MGP_CBAJ_G0016274.1 mouse_genomes_project 1 149786025 149816788 - MGP_CBAJ_P0022047 Igfn1 protein_coding protein_coding MGP_CBAJ_T0000460.1 MGP_CBAJ_G0000402.1 mouse_genomes_project 1 66348996 66349916 + TEC TEC MGP_CBAJ_T0022831.1 MGP_CBAJ_G0016424.1 mouse_genomes_project 1 181663816 181685814 - MGP_CBAJ_P0022831 Blzf1 protein_coding protein_coding MGP_CBAJ_T0022832.1 MGP_CBAJ_G0016424.1 mouse_genomes_project 1 181665405 181685819 - MGP_CBAJ_P0022832 Blzf1 protein_coding protein_coding MGP_CBAJ_T0022833.1 MGP_CBAJ_G0016424.1 mouse_genomes_project 1 181666146 181685819 - MGP_CBAJ_P0022833 Blzf1 protein_coding protein_coding MGP_CBAJ_T0022834.1 MGP_CBAJ_G0016424.1 mouse_genomes_project 1 181677871 181685602 - Blzf1 protein_coding processed_transcript MGP_CBAJ_T0022836.1 MGP_CBAJ_G0016424.1 mouse_genomes_project 1 181683531 181685801 - Blzf1 protein_coding retained_intron MGP_CBAJ_T0012103.1 MGP_CBAJ_G0010215.1 mouse_genomes_project 1 147029481 147030244 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009356.1 MGP_CBAJ_G0007494.1 mouse_genomes_project 1 29558614 29558710 - Gm23785 miRNA miRNA MGP_CBAJ_T0023323.1 MGP_CBAJ_G0016533.1 mouse_genomes_project 1 191001067 191003268 - MGP_CBAJ_P0023323 Dusp23 protein_coding protein_coding MGP_CBAJ_T0002806.1 MGP_CBAJ_G0002650.1 mouse_genomes_project 1 140478558 140498988 - 2900009J06Rik antisense antisense MGP_CBAJ_T0002807.1 MGP_CBAJ_G0002650.1 mouse_genomes_project 1 140478558 140499026 - 2900009J06Rik antisense antisense MGP_CBAJ_T0005819.1 MGP_CBAJ_G0004874.1 mouse_genomes_project 1 147522281 147534054 + Gm1627 lincRNA lincRNA MGP_CBAJ_T0000487.1 MGP_CBAJ_G0000429.1 mouse_genomes_project 1 81578069 81580261 - TEC TEC MGP_CBAJ_T0011665.1 MGP_CBAJ_G0009801.1 mouse_genomes_project 1 192962685 192963735 + MGP_CBAJ_P0011665 Olfr421-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0000706.1 MGP_CBAJ_G0000646.1 mouse_genomes_project 1 190711409 190714140 - TEC TEC MGP_CBAJ_T0099758.1 MGP_CBAJ_G0038013.1 mouse_genomes_project 1 62118027 62118137 - Gm24548 snoRNA snoRNA MGP_CBAJ_T0005653.1 MGP_CBAJ_G0004742.1 mouse_genomes_project 1 61247849 61266172 - 4930558J18Rik lincRNA lincRNA MGP_CBAJ_T0011952.1 MGP_CBAJ_G0010064.1 mouse_genomes_project 1 71056382 71057148 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012106.1 MGP_CBAJ_G0010218.1 mouse_genomes_project 1 149691007 149691376 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0022194.1 MGP_CBAJ_G0016305.1 mouse_genomes_project 1 158539369 158570501 - MGP_CBAJ_P0022194 Trove2 protein_coding protein_coding MGP_CBAJ_T0022195.1 MGP_CBAJ_G0016305.1 mouse_genomes_project 1 158544439 158570355 - Trove2 protein_coding retained_intron MGP_CBAJ_T0020539.1 MGP_CBAJ_G0015941.1 mouse_genomes_project 1 84963848 84967986 - protein_coding processed_transcript MGP_CBAJ_T0012180.1 MGP_CBAJ_G0010292.1 mouse_genomes_project 1 183270187 183271249 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005933.1 MGP_CBAJ_G0004964.1 mouse_genomes_project 1 203809432 203877913 + Gm34068 lincRNA lincRNA MGP_CBAJ_T0019638.1 MGP_CBAJ_G0015784.1 mouse_genomes_project 1 61714727 61830781 + MGP_CBAJ_P0019638 Spats2l protein_coding protein_coding MGP_CBAJ_T0019639.1 MGP_CBAJ_G0015784.1 mouse_genomes_project 1 61714814 61824842 + Spats2l protein_coding retained_intron MGP_CBAJ_T0019640.1 MGP_CBAJ_G0015784.1 mouse_genomes_project 1 61714866 61847122 + MGP_CBAJ_P0019640 Spats2l protein_coding protein_coding MGP_CBAJ_T0019641.1 MGP_CBAJ_G0015784.1 mouse_genomes_project 1 61714984 61743886 + Spats2l protein_coding retained_intron MGP_CBAJ_T0019642.1 MGP_CBAJ_G0015784.1 mouse_genomes_project 1 61715165 61830849 + MGP_CBAJ_P0019642 Spats2l protein_coding protein_coding MGP_CBAJ_T0019643.1 MGP_CBAJ_G0015784.1 mouse_genomes_project 1 61715309 61883009 + MGP_CBAJ_P0019643 Spats2l protein_coding protein_coding MGP_CBAJ_T0019644.1 MGP_CBAJ_G0015784.1 mouse_genomes_project 1 61715455 61802470 + Spats2l protein_coding retained_intron MGP_CBAJ_T0019645.1 MGP_CBAJ_G0015784.1 mouse_genomes_project 1 61715477 61777479 + Spats2l protein_coding retained_intron MGP_CBAJ_T0019646.1 MGP_CBAJ_G0015784.1 mouse_genomes_project 1 61715482 61743028 + Spats2l protein_coding retained_intron MGP_CBAJ_T0019647.1 MGP_CBAJ_G0015784.1 mouse_genomes_project 1 61741119 61892258 + MGP_CBAJ_P0019647 Spats2l protein_coding protein_coding MGP_CBAJ_T0019648.1 MGP_CBAJ_G0015784.1 mouse_genomes_project 1 61847083 61886114 + Spats2l protein_coding retained_intron MGP_CBAJ_T0022368.1 MGP_CBAJ_G0016338.1 mouse_genomes_project 1 169513485 169545345 - MGP_CBAJ_P0022368 Dhx9 protein_coding protein_coding MGP_CBAJ_T0022369.1 MGP_CBAJ_G0016338.1 mouse_genomes_project 1 169513485 169545397 - MGP_CBAJ_P0022369 Dhx9 protein_coding protein_coding MGP_CBAJ_T0022370.1 MGP_CBAJ_G0016338.1 mouse_genomes_project 1 169520360 169545382 - MGP_CBAJ_P0022370 Dhx9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022371.1 MGP_CBAJ_G0016338.1 mouse_genomes_project 1 169520366 169535876 - MGP_CBAJ_P0022371 Dhx9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022372.1 MGP_CBAJ_G0016338.1 mouse_genomes_project 1 169522069 169545388 - MGP_CBAJ_P0022372 Dhx9 protein_coding protein_coding MGP_CBAJ_T0022373.1 MGP_CBAJ_G0016338.1 mouse_genomes_project 1 169529931 169535890 - Dhx9 protein_coding retained_intron MGP_CBAJ_T0022374.1 MGP_CBAJ_G0016338.1 mouse_genomes_project 1 169534575 169545395 - Dhx9 protein_coding retained_intron MGP_CBAJ_T0022375.1 MGP_CBAJ_G0016338.1 mouse_genomes_project 1 169536013 169538287 - Dhx9 protein_coding retained_intron MGP_CBAJ_T0022376.1 MGP_CBAJ_G0016338.1 mouse_genomes_project 1 169540107 169545371 - Dhx9 protein_coding retained_intron MGP_CBAJ_T0012049.1 MGP_CBAJ_G0010161.1 mouse_genomes_project 1 120145535 120145722 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018992.1 MGP_CBAJ_G0015661.1 mouse_genomes_project 1 37154258 37278632 - MGP_CBAJ_P0018992 Uggt1 protein_coding protein_coding MGP_CBAJ_T0018993.1 MGP_CBAJ_G0015661.1 mouse_genomes_project 1 37162193 37184550 - Uggt1 protein_coding retained_intron MGP_CBAJ_T0018994.1 MGP_CBAJ_G0015661.1 mouse_genomes_project 1 37162197 37278488 - MGP_CBAJ_P0018994 Uggt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018995.1 MGP_CBAJ_G0015661.1 mouse_genomes_project 1 37164868 37169256 - Uggt1 protein_coding retained_intron MGP_CBAJ_T0018996.1 MGP_CBAJ_G0015661.1 mouse_genomes_project 1 37180478 37194676 - MGP_CBAJ_P0018996 Uggt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018997.1 MGP_CBAJ_G0015661.1 mouse_genomes_project 1 37180957 37205766 - MGP_CBAJ_P0018997 Uggt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018998.1 MGP_CBAJ_G0015661.1 mouse_genomes_project 1 37182110 37183690 - Uggt1 protein_coding retained_intron MGP_CBAJ_T0018999.1 MGP_CBAJ_G0015661.1 mouse_genomes_project 1 37199791 37278434 - Uggt1 protein_coding retained_intron MGP_CBAJ_T0019000.1 MGP_CBAJ_G0015661.1 mouse_genomes_project 1 37209021 37243239 - MGP_CBAJ_P0019000 Uggt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019001.1 MGP_CBAJ_G0015661.1 mouse_genomes_project 1 37219122 37241412 - Uggt1 protein_coding retained_intron MGP_CBAJ_T0019002.1 MGP_CBAJ_G0015661.1 mouse_genomes_project 1 37277965 37279047 - Uggt1 protein_coding retained_intron MGP_CBAJ_T0011778.1 MGP_CBAJ_G0009890.1 mouse_genomes_project 1 16576244 16580860 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0020557.1 MGP_CBAJ_G0015946.1 mouse_genomes_project 1 86001401 86006853 - MGP_CBAJ_P0020557 Scg2 protein_coding protein_coding MGP_CBAJ_T0020558.1 MGP_CBAJ_G0015946.1 mouse_genomes_project 1 86001401 86006775 - MGP_CBAJ_P0020558 Scg2 protein_coding protein_coding MGP_CBAJ_T0022179.1 MGP_CBAJ_G0016303.1 mouse_genomes_project 1 158411125 158432269 + MGP_CBAJ_P0022179 B3galt2 protein_coding protein_coding MGP_CBAJ_T0019899.1 MGP_CBAJ_G0015826.1 mouse_genomes_project 1 67599026 67739076 - MGP_CBAJ_P0019899 Ino80d protein_coding nonsense_mediated_decay MGP_CBAJ_T0019900.1 MGP_CBAJ_G0015826.1 mouse_genomes_project 1 67704402 67759170 - MGP_CBAJ_P0019900 Ino80d protein_coding protein_coding MGP_CBAJ_T0019901.1 MGP_CBAJ_G0015826.1 mouse_genomes_project 1 67706554 67709981 - Ino80d protein_coding retained_intron MGP_CBAJ_T0019902.1 MGP_CBAJ_G0015826.1 mouse_genomes_project 1 67708569 67772198 - MGP_CBAJ_P0019902 Ino80d protein_coding protein_coding MGP_CBAJ_T0019903.1 MGP_CBAJ_G0015826.1 mouse_genomes_project 1 67708583 67772119 - MGP_CBAJ_P0019903 Ino80d protein_coding protein_coding MGP_CBAJ_T0098239.1 MGP_CBAJ_G0036511.1 mouse_genomes_project 1 144636328 144638730 - Gm29488 sense_intronic sense_intronic MGP_CBAJ_T0005660.1 MGP_CBAJ_G0004747.1 mouse_genomes_project 1 65209067 65236706 + 2310016D23Rik lincRNA lincRNA MGP_CBAJ_T0021872.1 MGP_CBAJ_G0016237.1 mouse_genomes_project 1 147465190 147476312 - MGP_CBAJ_P0021872 Prelp protein_coding protein_coding MGP_CBAJ_T0021873.1 MGP_CBAJ_G0016237.1 mouse_genomes_project 1 147467606 147476309 - Prelp protein_coding processed_transcript MGP_CBAJ_T0020788.1 MGP_CBAJ_G0015997.1 mouse_genomes_project 1 94640703 94644308 - MGP_CBAJ_P0020788 Alpi protein_coding protein_coding MGP_CBAJ_T0023504.1 MGP_CBAJ_G0016596.1 mouse_genomes_project 1 199088678 199178710 + MGP_CBAJ_P0023504 Cnst protein_coding protein_coding MGP_CBAJ_T0023505.1 MGP_CBAJ_G0016596.1 mouse_genomes_project 1 199088807 199127764 + Cnst protein_coding retained_intron MGP_CBAJ_T0023506.1 MGP_CBAJ_G0016596.1 mouse_genomes_project 1 199088817 199149069 + Cnst protein_coding retained_intron MGP_CBAJ_T0023507.1 MGP_CBAJ_G0016596.1 mouse_genomes_project 1 199138252 199153705 + Cnst protein_coding processed_transcript MGP_CBAJ_T0002874.1 MGP_CBAJ_G0002702.1 mouse_genomes_project 1 183907189 183910034 - 5330438I03Rik antisense antisense MGP_CBAJ_T0021366.1 MGP_CBAJ_G0016129.1 mouse_genomes_project 1 129224779 129260670 + MGP_CBAJ_P0021366 protein_coding protein_coding MGP_CBAJ_T0000678.1 MGP_CBAJ_G0000618.1 mouse_genomes_project 1 177508425 177510502 - TEC TEC MGP_CBAJ_T0023048.1 MGP_CBAJ_G0016474.1 mouse_genomes_project 1 188965937 188966754 + MGP_CBAJ_P0023048 Gm26620 protein_coding protein_coding MGP_CBAJ_T0002680.1 MGP_CBAJ_G0002558.1 mouse_genomes_project 1 7469797 7516913 + 1700034P13Rik antisense antisense MGP_CBAJ_T0002681.1 MGP_CBAJ_G0002558.1 mouse_genomes_project 1 7470105 7515625 + 1700034P13Rik antisense antisense MGP_CBAJ_T0002682.1 MGP_CBAJ_G0002558.1 mouse_genomes_project 1 7470630 7495535 + 1700034P13Rik antisense antisense MGP_CBAJ_T0002683.1 MGP_CBAJ_G0002558.1 mouse_genomes_project 1 7470736 7495374 + 1700034P13Rik antisense antisense MGP_CBAJ_T0002684.1 MGP_CBAJ_G0002558.1 mouse_genomes_project 1 7508051 7515471 + 1700034P13Rik antisense antisense MGP_CBAJ_T0098247.1 MGP_CBAJ_G0036519.1 mouse_genomes_project 1 177201754 177213094 - sense_intronic sense_intronic MGP_CBAJ_T0099743.1 MGP_CBAJ_G0037998.1 mouse_genomes_project 1 22534182 22534303 + Gm24176 snoRNA snoRNA MGP_CBAJ_T0011139.1 MGP_CBAJ_G0009277.1 mouse_genomes_project 1 216091888 216092182 + Gm23885 misc_RNA misc_RNA MGP_CBAJ_T0022793.1 MGP_CBAJ_G0016412.1 mouse_genomes_project 1 180670283 180689033 - MGP_CBAJ_P0022793 Gorab protein_coding protein_coding MGP_CBAJ_T0022794.1 MGP_CBAJ_G0016412.1 mouse_genomes_project 1 180670287 180689020 - MGP_CBAJ_P0022794 Gorab protein_coding nonsense_mediated_decay MGP_CBAJ_T0022795.1 MGP_CBAJ_G0016412.1 mouse_genomes_project 1 180679779 180688975 - Gorab protein_coding retained_intron MGP_CBAJ_T0023466.1 MGP_CBAJ_G0016585.1 mouse_genomes_project 1 196899768 196938696 - MGP_CBAJ_P0023466 Adss protein_coding protein_coding MGP_CBAJ_T0023467.1 MGP_CBAJ_G0016585.1 mouse_genomes_project 1 196899982 196905404 - Adss protein_coding retained_intron MGP_CBAJ_T0023468.1 MGP_CBAJ_G0016585.1 mouse_genomes_project 1 196911420 196938686 - Adss protein_coding retained_intron MGP_CBAJ_T0023100.1 MGP_CBAJ_G0016486.1 mouse_genomes_project 1 189404690 189406010 + MGP_CBAJ_P0023100 Apoa2 protein_coding protein_coding MGP_CBAJ_T0023101.1 MGP_CBAJ_G0016486.1 mouse_genomes_project 1 189404718 189406009 + MGP_CBAJ_P0023101 Apoa2 protein_coding protein_coding MGP_CBAJ_T0023102.1 MGP_CBAJ_G0016486.1 mouse_genomes_project 1 189404720 189406004 + MGP_CBAJ_P0023102 Apoa2 protein_coding protein_coding MGP_CBAJ_T0023103.1 MGP_CBAJ_G0016486.1 mouse_genomes_project 1 189404727 189405968 + MGP_CBAJ_P0023103 Apoa2 protein_coding protein_coding MGP_CBAJ_T0098526.1 MGP_CBAJ_G0036781.1 mouse_genomes_project 1 47977534 47977641 - Gm23216 snRNA snRNA MGP_CBAJ_T0018894.1 MGP_CBAJ_G0015643.1 mouse_genomes_project 1 32712966 33259430 + MGP_CBAJ_P0018894 Khdrbs2 protein_coding protein_coding MGP_CBAJ_T0018895.1 MGP_CBAJ_G0015643.1 mouse_genomes_project 1 32712981 32793946 + MGP_CBAJ_P0018895 Khdrbs2 protein_coding protein_coding MGP_CBAJ_T0018896.1 MGP_CBAJ_G0015643.1 mouse_genomes_project 1 32713000 32899754 + MGP_CBAJ_P0018896 Khdrbs2 protein_coding protein_coding MGP_CBAJ_T0018897.1 MGP_CBAJ_G0015643.1 mouse_genomes_project 1 32713139 32860247 + MGP_CBAJ_P0018897 Khdrbs2 protein_coding protein_coding MGP_CBAJ_T0005977.1 MGP_CBAJ_G0004997.1 mouse_genomes_project 1 216259981 216260332 - Gm37027 lincRNA lincRNA MGP_CBAJ_T0012001.1 MGP_CBAJ_G0010113.1 mouse_genomes_project 1 96867817 96869072 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000694.1 MGP_CBAJ_G0000634.1 mouse_genomes_project 1 182291609 182295130 - TEC TEC MGP_CBAJ_T0020298.1 MGP_CBAJ_G0015903.1 mouse_genomes_project 1 80834214 80844246 - MGP_CBAJ_P0020298 Prkag3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020299.1 MGP_CBAJ_G0015903.1 mouse_genomes_project 1 80835493 80844512 - MGP_CBAJ_P0020299 Prkag3 protein_coding protein_coding MGP_CBAJ_T0020300.1 MGP_CBAJ_G0015903.1 mouse_genomes_project 1 80835493 80843868 - MGP_CBAJ_P0020300 Prkag3 protein_coding protein_coding MGP_CBAJ_T0020301.1 MGP_CBAJ_G0015903.1 mouse_genomes_project 1 80836755 80844158 - MGP_CBAJ_P0020301 Prkag3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020302.1 MGP_CBAJ_G0015903.1 mouse_genomes_project 1 80842808 80844195 - MGP_CBAJ_P0020302 Prkag3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021444.1 MGP_CBAJ_G0016141.1 mouse_genomes_project 1 131764702 131770020 - MGP_CBAJ_P0021444 Tmem177 protein_coding protein_coding MGP_CBAJ_T0021463.1 MGP_CBAJ_G0016147.1 mouse_genomes_project 1 132088112 132167260 - MGP_CBAJ_P0021463 Steap3 protein_coding protein_coding MGP_CBAJ_T0021464.1 MGP_CBAJ_G0016147.1 mouse_genomes_project 1 132121426 132173077 - MGP_CBAJ_P0021464 Steap3 protein_coding protein_coding MGP_CBAJ_T0021465.1 MGP_CBAJ_G0016147.1 mouse_genomes_project 1 132123688 132172416 - MGP_CBAJ_P0021465 Steap3 protein_coding protein_coding MGP_CBAJ_T0021466.1 MGP_CBAJ_G0016147.1 mouse_genomes_project 1 132124705 132172223 - MGP_CBAJ_P0021466 Steap3 protein_coding protein_coding MGP_CBAJ_T0000342.1 MGP_CBAJ_G0000287.1 mouse_genomes_project 1 8285110 8287861 - TEC TEC MGP_CBAJ_T0011886.1 MGP_CBAJ_G0009998.1 mouse_genomes_project 1 52181087 52182793 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000675.1 MGP_CBAJ_G0000615.1 mouse_genomes_project 1 177195137 177196283 - TEC TEC MGP_CBAJ_T0011887.1 MGP_CBAJ_G0009999.1 mouse_genomes_project 1 52296908 52297348 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0022626.1 MGP_CBAJ_G0016383.1 mouse_genomes_project 1 177073669 177088131 - MGP_CBAJ_P0022626 Cacybp protein_coding protein_coding MGP_CBAJ_T0022627.1 MGP_CBAJ_G0016383.1 mouse_genomes_project 1 177081374 177088061 - MGP_CBAJ_P0022627 Cacybp protein_coding protein_coding MGP_CBAJ_T0022628.1 MGP_CBAJ_G0016383.1 mouse_genomes_project 1 177083343 177087982 - Cacybp protein_coding retained_intron MGP_CBAJ_T0005741.1 MGP_CBAJ_G0004808.1 mouse_genomes_project 1 97276737 97341725 - Gm28342 lincRNA lincRNA MGP_CBAJ_T0023373.1 MGP_CBAJ_G0016562.1 mouse_genomes_project 1 192969943 192970989 + MGP_CBAJ_P0023373 Olfr420 protein_coding protein_coding MGP_CBAJ_T0101457.1 MGP_CBAJ_G0039489.1 mouse_genomes_project 1 94609498 94612469 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0009384.1 MGP_CBAJ_G0007522.1 mouse_genomes_project 1 80437180 80437265 + Mir26b miRNA miRNA MGP_CBAJ_T0018868.1 MGP_CBAJ_G0015636.1 mouse_genomes_project 1 26373692 26379337 - MGP_CBAJ_P0018868 protein_coding protein_coding MGP_CBAJ_T0020056.1 MGP_CBAJ_G0015857.1 mouse_genomes_project 1 71815190 71902041 - MGP_CBAJ_P0020056 Kansl1l protein_coding protein_coding MGP_CBAJ_T0020057.1 MGP_CBAJ_G0015857.1 mouse_genomes_project 1 71815305 71921668 - MGP_CBAJ_P0020057 Kansl1l protein_coding protein_coding MGP_CBAJ_T0020058.1 MGP_CBAJ_G0015857.1 mouse_genomes_project 1 71835787 71921684 - MGP_CBAJ_P0020058 Kansl1l protein_coding protein_coding MGP_CBAJ_T0020059.1 MGP_CBAJ_G0015857.1 mouse_genomes_project 1 71881760 71910178 - Kansl1l protein_coding processed_transcript MGP_CBAJ_T0020060.1 MGP_CBAJ_G0015857.1 mouse_genomes_project 1 71901572 71921668 - Kansl1l protein_coding retained_intron MGP_CBAJ_T0020362.1 MGP_CBAJ_G0015918.1 mouse_genomes_project 1 81263102 81268492 + Ankzf1 protein_coding retained_intron MGP_CBAJ_T0020363.1 MGP_CBAJ_G0015918.1 mouse_genomes_project 1 81263111 81268942 + Ankzf1 protein_coding retained_intron MGP_CBAJ_T0020364.1 MGP_CBAJ_G0015918.1 mouse_genomes_project 1 81263111 81272795 + Ankzf1 protein_coding retained_intron MGP_CBAJ_T0020365.1 MGP_CBAJ_G0015918.1 mouse_genomes_project 1 81263111 81272795 + Ankzf1 protein_coding retained_intron MGP_CBAJ_T0020366.1 MGP_CBAJ_G0015918.1 mouse_genomes_project 1 81263111 81272795 + MGP_CBAJ_P0020366 Ankzf1 protein_coding protein_coding MGP_CBAJ_T0020367.1 MGP_CBAJ_G0015918.1 mouse_genomes_project 1 81263111 81272795 + MGP_CBAJ_P0020367 Ankzf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020368.1 MGP_CBAJ_G0015918.1 mouse_genomes_project 1 81263143 81268942 + MGP_CBAJ_P0020368 Ankzf1 protein_coding protein_coding MGP_CBAJ_T0020369.1 MGP_CBAJ_G0015918.1 mouse_genomes_project 1 81269100 81270064 + Ankzf1 protein_coding retained_intron MGP_CBAJ_T0002904.1 MGP_CBAJ_G0002727.1 mouse_genomes_project 1 205474334 205483455 - antisense antisense MGP_CBAJ_T0012032.1 MGP_CBAJ_G0010144.1 mouse_genomes_project 1 114213530 114213837 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101502.1 MGP_CBAJ_G0039534.1 mouse_genomes_project 1 192953557 192954448 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0023333.1 MGP_CBAJ_G0016540.1 mouse_genomes_project 1 191674645 191675679 + MGP_CBAJ_P0023333 Olfr1404 protein_coding protein_coding MGP_CBAJ_T0021270.1 MGP_CBAJ_G0016102.1 mouse_genomes_project 1 107575887 107679526 + MGP_CBAJ_P0021270 Slco6d1 protein_coding protein_coding MGP_CBAJ_T0021271.1 MGP_CBAJ_G0016102.1 mouse_genomes_project 1 107575890 107689312 + MGP_CBAJ_P0021271 Slco6d1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021272.1 MGP_CBAJ_G0016102.1 mouse_genomes_project 1 107575917 107679393 + MGP_CBAJ_P0021272 Slco6d1 protein_coding protein_coding MGP_CBAJ_T0021273.1 MGP_CBAJ_G0016102.1 mouse_genomes_project 1 107666541 107679529 + Slco6d1 protein_coding processed_transcript MGP_CBAJ_T0011854.1 MGP_CBAJ_G0009966.1 mouse_genomes_project 1 45270235 45270688 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021557.1 MGP_CBAJ_G0016167.1 mouse_genomes_project 1 140693139 140863041 - MGP_CBAJ_P0021557 Zranb3 protein_coding protein_coding MGP_CBAJ_T0021558.1 MGP_CBAJ_G0016167.1 mouse_genomes_project 1 140693742 140863580 - MGP_CBAJ_P0021558 Zranb3 protein_coding protein_coding MGP_CBAJ_T0021559.1 MGP_CBAJ_G0016167.1 mouse_genomes_project 1 140704235 140714310 - Zranb3 protein_coding processed_transcript MGP_CBAJ_T0021560.1 MGP_CBAJ_G0016167.1 mouse_genomes_project 1 140728513 140863626 - Zranb3 protein_coding processed_transcript MGP_CBAJ_T0021561.1 MGP_CBAJ_G0016167.1 mouse_genomes_project 1 140737939 140863042 - Zranb3 protein_coding retained_intron MGP_CBAJ_T0021562.1 MGP_CBAJ_G0016167.1 mouse_genomes_project 1 140738326 140764724 - Zranb3 protein_coding processed_transcript MGP_CBAJ_T0021563.1 MGP_CBAJ_G0016167.1 mouse_genomes_project 1 140811151 140863033 - Zranb3 protein_coding retained_intron MGP_CBAJ_T0011838.1 MGP_CBAJ_G0009950.1 mouse_genomes_project 1 35500909 35502304 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023337.1 MGP_CBAJ_G0016543.1 mouse_genomes_project 1 191844686 191846553 - Ackr1 protein_coding processed_transcript MGP_CBAJ_T0023338.1 MGP_CBAJ_G0016543.1 mouse_genomes_project 1 191844690 191846305 - MGP_CBAJ_P0023338 Ackr1 protein_coding protein_coding MGP_CBAJ_T0023339.1 MGP_CBAJ_G0016543.1 mouse_genomes_project 1 191844692 191846476 - MGP_CBAJ_P0023339 Ackr1 protein_coding protein_coding MGP_CBAJ_T0000590.1 MGP_CBAJ_G0000532.1 mouse_genomes_project 1 143626374 143627923 + TEC TEC MGP_CBAJ_T0019460.1 MGP_CBAJ_G0015749.1 mouse_genomes_project 1 55279311 55357706 - MGP_CBAJ_P0019460 Gls protein_coding protein_coding MGP_CBAJ_T0019461.1 MGP_CBAJ_G0015749.1 mouse_genomes_project 1 55281804 55356779 - MGP_CBAJ_P0019461 Gls protein_coding protein_coding MGP_CBAJ_T0019462.1 MGP_CBAJ_G0015749.1 mouse_genomes_project 1 55281991 55309611 - MGP_CBAJ_P0019462 Gls protein_coding protein_coding MGP_CBAJ_T0019463.1 MGP_CBAJ_G0015749.1 mouse_genomes_project 1 55282127 55284839 - Gls protein_coding retained_intron MGP_CBAJ_T0019464.1 MGP_CBAJ_G0015749.1 mouse_genomes_project 1 55282145 55285009 - Gls protein_coding retained_intron MGP_CBAJ_T0019465.1 MGP_CBAJ_G0015749.1 mouse_genomes_project 1 55284310 55309612 - Gls protein_coding retained_intron MGP_CBAJ_T0019466.1 MGP_CBAJ_G0015749.1 mouse_genomes_project 1 55299969 55357715 - MGP_CBAJ_P0019466 Gls protein_coding protein_coding MGP_CBAJ_T0019467.1 MGP_CBAJ_G0015749.1 mouse_genomes_project 1 55301145 55324909 - Gls protein_coding retained_intron MGP_CBAJ_T0019468.1 MGP_CBAJ_G0015749.1 mouse_genomes_project 1 55301145 55336691 - MGP_CBAJ_P0019468 Gls protein_coding protein_coding MGP_CBAJ_T0019469.1 MGP_CBAJ_G0015749.1 mouse_genomes_project 1 55303548 55309611 - MGP_CBAJ_P0019469 Gls protein_coding protein_coding MGP_CBAJ_T0019470.1 MGP_CBAJ_G0015749.1 mouse_genomes_project 1 55305325 55321801 - Gls protein_coding retained_intron MGP_CBAJ_T0019471.1 MGP_CBAJ_G0015749.1 mouse_genomes_project 1 55309901 55340076 - Gls protein_coding processed_transcript MGP_CBAJ_T0019472.1 MGP_CBAJ_G0015749.1 mouse_genomes_project 1 55320904 55324801 - Gls protein_coding retained_intron MGP_CBAJ_T0019473.1 MGP_CBAJ_G0015749.1 mouse_genomes_project 1 55328651 55340076 - Gls protein_coding retained_intron MGP_CBAJ_T0019474.1 MGP_CBAJ_G0015749.1 mouse_genomes_project 1 55329662 55339015 - Gls protein_coding retained_intron MGP_CBAJ_T0019475.1 MGP_CBAJ_G0015749.1 mouse_genomes_project 1 55331782 55340425 - Gls protein_coding retained_intron MGP_CBAJ_T0019476.1 MGP_CBAJ_G0015749.1 mouse_genomes_project 1 55338999 55357294 - Gls protein_coding processed_transcript MGP_CBAJ_T0022232.1 MGP_CBAJ_G0016314.1 mouse_genomes_project 1 165765094 165773175 + MGP_CBAJ_P0022232 Ptgs2 protein_coding protein_coding MGP_CBAJ_T0022233.1 MGP_CBAJ_G0016314.1 mouse_genomes_project 1 165765395 165766391 + MGP_CBAJ_P0022233 Ptgs2 protein_coding protein_coding MGP_CBAJ_T0011912.1 MGP_CBAJ_G0010024.1 mouse_genomes_project 1 61430491 61431370 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005856.1 MGP_CBAJ_G0004904.1 mouse_genomes_project 1 170193932 170200871 - Gm28286 lincRNA lincRNA MGP_CBAJ_T0000361.1 MGP_CBAJ_G0000306.1 mouse_genomes_project 1 15094385 15097365 + TEC TEC MGP_CBAJ_T0021546.1 MGP_CBAJ_G0016165.1 mouse_genomes_project 1 140547328 140574749 - MGP_CBAJ_P0021546 Map3k19 protein_coding protein_coding MGP_CBAJ_T0021547.1 MGP_CBAJ_G0016165.1 mouse_genomes_project 1 140547337 140574749 - MGP_CBAJ_P0021547 Map3k19 protein_coding protein_coding MGP_CBAJ_T0021548.1 MGP_CBAJ_G0016165.1 mouse_genomes_project 1 140547337 140574749 - MGP_CBAJ_P0021548 Map3k19 protein_coding protein_coding MGP_CBAJ_T0021549.1 MGP_CBAJ_G0016165.1 mouse_genomes_project 1 140547346 140574749 - MGP_CBAJ_P0021549 Map3k19 protein_coding protein_coding MGP_CBAJ_T0021550.1 MGP_CBAJ_G0016165.1 mouse_genomes_project 1 140547346 140593625 - MGP_CBAJ_P0021550 Map3k19 protein_coding unknown_likely_coding MGP_CBAJ_T0000344.1 MGP_CBAJ_G0000289.1 mouse_genomes_project 1 9306132 9308603 + TEC TEC MGP_CBAJ_T0019884.1 MGP_CBAJ_G0015823.1 mouse_genomes_project 1 65443192 65461815 + MGP_CBAJ_P0019884 Icos protein_coding protein_coding MGP_CBAJ_T0019885.1 MGP_CBAJ_G0015823.1 mouse_genomes_project 1 65443192 65466338 + MGP_CBAJ_P0019885 Icos protein_coding protein_coding MGP_CBAJ_T0020078.1 MGP_CBAJ_G0015862.1 mouse_genomes_project 1 73302630 74539857 - MGP_CBAJ_P0020078 Erbb4 protein_coding protein_coding MGP_CBAJ_T0020079.1 MGP_CBAJ_G0015862.1 mouse_genomes_project 1 73302630 74540160 - MGP_CBAJ_P0020079 Erbb4 protein_coding protein_coding MGP_CBAJ_T0020080.1 MGP_CBAJ_G0015862.1 mouse_genomes_project 1 73544579 74539857 - MGP_CBAJ_P0020080 Erbb4 protein_coding protein_coding MGP_CBAJ_T0020081.1 MGP_CBAJ_G0015862.1 mouse_genomes_project 1 73578681 73586845 - Erbb4 protein_coding processed_transcript MGP_CBAJ_T0020082.1 MGP_CBAJ_G0015862.1 mouse_genomes_project 1 73586676 73633579 - Erbb4 protein_coding retained_intron MGP_CBAJ_T0019328.1 MGP_CBAJ_G0015726.1 mouse_genomes_project 1 45997329 46014752 + Tpp2 protein_coding processed_transcript MGP_CBAJ_T0019329.1 MGP_CBAJ_G0015726.1 mouse_genomes_project 1 45997689 46072000 + MGP_CBAJ_P0019329 Tpp2 protein_coding protein_coding MGP_CBAJ_T0019330.1 MGP_CBAJ_G0015726.1 mouse_genomes_project 1 45997696 46022348 + Tpp2 protein_coding retained_intron MGP_CBAJ_T0019331.1 MGP_CBAJ_G0015726.1 mouse_genomes_project 1 45997697 46022348 + Tpp2 protein_coding retained_intron MGP_CBAJ_T0019332.1 MGP_CBAJ_G0015726.1 mouse_genomes_project 1 45997697 46072029 + MGP_CBAJ_P0019332 Tpp2 protein_coding protein_coding MGP_CBAJ_T0019333.1 MGP_CBAJ_G0015726.1 mouse_genomes_project 1 45997715 46059742 + MGP_CBAJ_P0019333 Tpp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019334.1 MGP_CBAJ_G0015726.1 mouse_genomes_project 1 45997727 46059723 + MGP_CBAJ_P0019334 Tpp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019335.1 MGP_CBAJ_G0015726.1 mouse_genomes_project 1 46039032 46045019 + MGP_CBAJ_P0019335 Tpp2 protein_coding protein_coding MGP_CBAJ_T0019336.1 MGP_CBAJ_G0015726.1 mouse_genomes_project 1 46052121 46072029 + MGP_CBAJ_P0019336 Tpp2 protein_coding protein_coding MGP_CBAJ_T0019337.1 MGP_CBAJ_G0015726.1 mouse_genomes_project 1 46069450 46071365 + Tpp2 protein_coding retained_intron MGP_CBAJ_T0011942.1 MGP_CBAJ_G0010054.1 mouse_genomes_project 1 68449061 68449565 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0023340.1 MGP_CBAJ_G0016544.1 mouse_genomes_project 1 191846058 191882648 - MGP_CBAJ_P0023340 Cadm3 protein_coding protein_coding MGP_CBAJ_T0023341.1 MGP_CBAJ_G0016544.1 mouse_genomes_project 1 191848797 191882638 - MGP_CBAJ_P0023341 Cadm3 protein_coding protein_coding MGP_CBAJ_T0023342.1 MGP_CBAJ_G0016544.1 mouse_genomes_project 1 191849649 191854742 - Cadm3 protein_coding retained_intron MGP_CBAJ_T0023343.1 MGP_CBAJ_G0016544.1 mouse_genomes_project 1 191857558 191882601 - Cadm3 protein_coding retained_intron MGP_CBAJ_T0023344.1 MGP_CBAJ_G0016544.1 mouse_genomes_project 1 191859958 191882586 - Cadm3 protein_coding retained_intron MGP_CBAJ_T0000618.1 MGP_CBAJ_G0000558.1 mouse_genomes_project 1 151988663 151990812 + TEC TEC MGP_CBAJ_T0022098.1 MGP_CBAJ_G0016286.1 mouse_genomes_project 1 150796973 150922340 - MGP_CBAJ_P0022098 Nr5a2 protein_coding protein_coding MGP_CBAJ_T0022099.1 MGP_CBAJ_G0016286.1 mouse_genomes_project 1 150798678 150907945 - MGP_CBAJ_P0022099 Nr5a2 protein_coding protein_coding MGP_CBAJ_T0022100.1 MGP_CBAJ_G0016286.1 mouse_genomes_project 1 150799716 150922272 - MGP_CBAJ_P0022100 Nr5a2 protein_coding protein_coding MGP_CBAJ_T0022101.1 MGP_CBAJ_G0016286.1 mouse_genomes_project 1 150799865 150912078 - MGP_CBAJ_P0022101 Nr5a2 protein_coding protein_coding MGP_CBAJ_T0022102.1 MGP_CBAJ_G0016286.1 mouse_genomes_project 1 150848858 150898966 - Nr5a2 protein_coding retained_intron MGP_CBAJ_T0022103.1 MGP_CBAJ_G0016286.1 mouse_genomes_project 1 150899367 150907556 - MGP_CBAJ_P0022103 Nr5a2 protein_coding protein_coding MGP_CBAJ_T0000570.1 MGP_CBAJ_G0000512.1 mouse_genomes_project 1 136770901 136775985 - TEC TEC MGP_CBAJ_T0000378.1 MGP_CBAJ_G0000321.1 mouse_genomes_project 1 24914801 24918056 - TEC TEC MGP_CBAJ_T0009429.1 MGP_CBAJ_G0007567.1 mouse_genomes_project 1 183222967 183223110 + Gm44458 miRNA miRNA MGP_CBAJ_T0009354.1 MGP_CBAJ_G0007492.1 mouse_genomes_project 1 22585450 22585534 + Mir30c-2 miRNA miRNA MGP_CBAJ_T0019312.1 MGP_CBAJ_G0015722.1 mouse_genomes_project 1 45108389 45151681 - MGP_CBAJ_P0019312 Fhl2 protein_coding protein_coding MGP_CBAJ_T0009349.1 MGP_CBAJ_G0007487.1 mouse_genomes_project 1 10419913 10420034 + Mir6341 miRNA miRNA MGP_CBAJ_T0098596.1 MGP_CBAJ_G0036851.1 mouse_genomes_project 1 209409574 209409678 + Gm25269 snRNA snRNA MGP_CBAJ_T0000365.1 MGP_CBAJ_G0000310.1 mouse_genomes_project 1 20216353 20218450 + TEC TEC MGP_CBAJ_T0012012.1 MGP_CBAJ_G0010124.1 mouse_genomes_project 1 102769659 102770501 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0022975.1 MGP_CBAJ_G0016453.1 mouse_genomes_project 1 185046277 185064767 + MGP_CBAJ_P0022975 Aldh9a1 protein_coding protein_coding MGP_CBAJ_T0022976.1 MGP_CBAJ_G0016453.1 mouse_genomes_project 1 185046522 185050733 + Aldh9a1 protein_coding processed_transcript MGP_CBAJ_T0022977.1 MGP_CBAJ_G0016453.1 mouse_genomes_project 1 185046598 185052121 + Aldh9a1 protein_coding retained_intron MGP_CBAJ_T0022978.1 MGP_CBAJ_G0016453.1 mouse_genomes_project 1 185060392 185063877 + Aldh9a1 protein_coding retained_intron MGP_CBAJ_T0098509.1 MGP_CBAJ_G0036764.1 mouse_genomes_project 1 1962022 1962125 - Gm25493 snRNA snRNA MGP_CBAJ_T0012029.1 MGP_CBAJ_G0010141.1 mouse_genomes_project 1 111367967 111368697 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011818.1 MGP_CBAJ_G0009930.1 mouse_genomes_project 1 31704185 31704744 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011935.1 MGP_CBAJ_G0010047.1 mouse_genomes_project 1 66674805 66675064 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0021640.1 MGP_CBAJ_G0016186.1 mouse_genomes_project 1 144109444 144113904 - MGP_CBAJ_P0021640 Il20 protein_coding protein_coding MGP_CBAJ_T0021641.1 MGP_CBAJ_G0016186.1 mouse_genomes_project 1 144109874 144113679 - MGP_CBAJ_P0021641 Il20 protein_coding protein_coding MGP_CBAJ_T0011921.1 MGP_CBAJ_G0010033.1 mouse_genomes_project 1 64491540 64495520 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011129.1 MGP_CBAJ_G0009267.1 mouse_genomes_project 1 114413798 114414128 + Gm23537 misc_RNA misc_RNA MGP_CBAJ_T0005929.1 MGP_CBAJ_G0004960.1 mouse_genomes_project 1 202688149 202688648 + Gm37218 lincRNA lincRNA MGP_CBAJ_T0011927.1 MGP_CBAJ_G0010039.1 mouse_genomes_project 1 65225405 65226748 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000720.1 MGP_CBAJ_G0000660.1 mouse_genomes_project 1 196212209 196213502 - TEC TEC MGP_CBAJ_T0101500.1 MGP_CBAJ_G0039532.1 mouse_genomes_project 1 192855539 192856077 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0098543.1 MGP_CBAJ_G0036798.1 mouse_genomes_project 1 78027341 78027532 + Gm25939 snRNA snRNA MGP_CBAJ_T0098518.1 MGP_CBAJ_G0036773.1 mouse_genomes_project 1 32114098 32114205 - Gm23032 snRNA snRNA MGP_CBAJ_T0002685.1 MGP_CBAJ_G0002559.1 mouse_genomes_project 1 7742974 7756765 + Gm15818 antisense antisense MGP_CBAJ_T0012024.1 MGP_CBAJ_G0010136.1 mouse_genomes_project 1 110045654 110046207 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021207.1 MGP_CBAJ_G0016088.1 mouse_genomes_project 1 102227021 102260235 + MGP_CBAJ_P0021207 Atg4b protein_coding protein_coding MGP_CBAJ_T0021208.1 MGP_CBAJ_G0016088.1 mouse_genomes_project 1 102232844 102277734 + MGP_CBAJ_P0021208 Atg4b protein_coding protein_coding MGP_CBAJ_T0021209.1 MGP_CBAJ_G0016088.1 mouse_genomes_project 1 102232927 102262840 + MGP_CBAJ_P0021209 Atg4b protein_coding protein_coding MGP_CBAJ_T0021210.1 MGP_CBAJ_G0016088.1 mouse_genomes_project 1 102232974 102272040 + MGP_CBAJ_P0021210 Atg4b protein_coding nonsense_mediated_decay MGP_CBAJ_T0021211.1 MGP_CBAJ_G0016088.1 mouse_genomes_project 1 102232984 102275298 + Atg4b protein_coding retained_intron MGP_CBAJ_T0021212.1 MGP_CBAJ_G0016088.1 mouse_genomes_project 1 102233101 102246997 + Atg4b protein_coding processed_transcript MGP_CBAJ_T0021213.1 MGP_CBAJ_G0016088.1 mouse_genomes_project 1 102246973 102260000 + Atg4b protein_coding retained_intron MGP_CBAJ_T0021214.1 MGP_CBAJ_G0016088.1 mouse_genomes_project 1 102271459 102272201 + Atg4b protein_coding retained_intron MGP_CBAJ_T0021215.1 MGP_CBAJ_G0016088.1 mouse_genomes_project 1 102271913 102274996 + MGP_CBAJ_P0021215 Atg4b protein_coding nonsense_mediated_decay MGP_CBAJ_T0021216.1 MGP_CBAJ_G0016088.1 mouse_genomes_project 1 102272702 102273700 + Atg4b protein_coding retained_intron MGP_CBAJ_T0021217.1 MGP_CBAJ_G0016088.1 mouse_genomes_project 1 102273337 102275018 + Atg4b protein_coding retained_intron MGP_CBAJ_T0101512.1 MGP_CBAJ_G0039544.1 mouse_genomes_project 1 201223255 201223933 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0005782.1 MGP_CBAJ_G0004843.1 mouse_genomes_project 1 122149051 122213078 - Gm29088 lincRNA lincRNA MGP_CBAJ_T0019275.1 MGP_CBAJ_G0015712.1 mouse_genomes_project 1 42130198 42176404 + MGP_CBAJ_P0019275 Il18rap protein_coding protein_coding MGP_CBAJ_T0019276.1 MGP_CBAJ_G0015712.1 mouse_genomes_project 1 42130241 42158823 + Il18rap protein_coding retained_intron MGP_CBAJ_T0019277.1 MGP_CBAJ_G0015712.1 mouse_genomes_project 1 42130284 42142896 + Il18rap protein_coding retained_intron MGP_CBAJ_T0019278.1 MGP_CBAJ_G0015712.1 mouse_genomes_project 1 42161029 42172602 + Il18rap protein_coding retained_intron MGP_CBAJ_T0000543.1 MGP_CBAJ_G0000485.1 mouse_genomes_project 1 113541349 113544024 + TEC TEC MGP_CBAJ_T0021696.1 MGP_CBAJ_G0016200.1 mouse_genomes_project 1 145049319 145075351 + MGP_CBAJ_P0021696 Pm20d1 protein_coding protein_coding MGP_CBAJ_T0021697.1 MGP_CBAJ_G0016200.1 mouse_genomes_project 1 145049336 145075363 + MGP_CBAJ_P0021697 Pm20d1 protein_coding protein_coding MGP_CBAJ_T0021698.1 MGP_CBAJ_G0016200.1 mouse_genomes_project 1 145064108 145070246 + MGP_CBAJ_P0021698 Pm20d1 protein_coding protein_coding MGP_CBAJ_T0021699.1 MGP_CBAJ_G0016200.1 mouse_genomes_project 1 145064146 145064384 + Pm20d1 protein_coding processed_transcript MGP_CBAJ_T0022980.1 MGP_CBAJ_G0016455.1 mouse_genomes_project 1 185160519 185183886 - MGP_CBAJ_P0022980 Lrrc52 protein_coding protein_coding MGP_CBAJ_T0011750.1 MGP_CBAJ_G0009862.1 mouse_genomes_project 1 6620429 6621737 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000607.1 MGP_CBAJ_G0000548.1 mouse_genomes_project 1 149318749 149320995 - TEC TEC MGP_CBAJ_T0101440.1 MGP_CBAJ_G0039472.1 mouse_genomes_project 1 16840530 16854907 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0011939.1 MGP_CBAJ_G0010051.1 mouse_genomes_project 1 67720177 67720423 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0019750.1 MGP_CBAJ_G0015802.1 mouse_genomes_project 1 63152805 63162628 + Stradb protein_coding retained_intron MGP_CBAJ_T0019751.1 MGP_CBAJ_G0015802.1 mouse_genomes_project 1 63152805 63168965 + Stradb protein_coding retained_intron MGP_CBAJ_T0019752.1 MGP_CBAJ_G0015802.1 mouse_genomes_project 1 63152805 63172631 + MGP_CBAJ_P0019752 Stradb protein_coding protein_coding MGP_CBAJ_T0019753.1 MGP_CBAJ_G0015802.1 mouse_genomes_project 1 63152805 63180249 + MGP_CBAJ_P0019753 Stradb protein_coding protein_coding MGP_CBAJ_T0019754.1 MGP_CBAJ_G0015802.1 mouse_genomes_project 1 63152805 63179656 + MGP_CBAJ_P0019754 Stradb protein_coding nonsense_mediated_decay MGP_CBAJ_T0019755.1 MGP_CBAJ_G0015802.1 mouse_genomes_project 1 63152805 63179531 + MGP_CBAJ_P0019755 Stradb protein_coding nonsense_mediated_decay MGP_CBAJ_T0019756.1 MGP_CBAJ_G0015802.1 mouse_genomes_project 1 63172175 63178893 + MGP_CBAJ_P0019756 Stradb protein_coding protein_coding MGP_CBAJ_T0019107.1 MGP_CBAJ_G0015679.1 mouse_genomes_project 1 38512150 38563782 + Inpp4a protein_coding processed_transcript MGP_CBAJ_T0019108.1 MGP_CBAJ_G0015679.1 mouse_genomes_project 1 38512176 38625651 + MGP_CBAJ_P0019108 Inpp4a protein_coding protein_coding MGP_CBAJ_T0019109.1 MGP_CBAJ_G0015679.1 mouse_genomes_project 1 38512178 38515052 + Inpp4a protein_coding retained_intron MGP_CBAJ_T0019110.1 MGP_CBAJ_G0015679.1 mouse_genomes_project 1 38512200 38614422 + MGP_CBAJ_P0019110 Inpp4a protein_coding protein_coding MGP_CBAJ_T0019111.1 MGP_CBAJ_G0015679.1 mouse_genomes_project 1 38512593 38623153 + MGP_CBAJ_P0019111 Inpp4a protein_coding protein_coding MGP_CBAJ_T0019112.1 MGP_CBAJ_G0015679.1 mouse_genomes_project 1 38512593 38623597 + MGP_CBAJ_P0019112 Inpp4a protein_coding protein_coding MGP_CBAJ_T0019113.1 MGP_CBAJ_G0015679.1 mouse_genomes_project 1 38572617 38618554 + MGP_CBAJ_P0019113 Inpp4a protein_coding protein_coding MGP_CBAJ_T0019114.1 MGP_CBAJ_G0015679.1 mouse_genomes_project 1 38572617 38623333 + MGP_CBAJ_P0019114 Inpp4a protein_coding protein_coding MGP_CBAJ_T0019115.1 MGP_CBAJ_G0015679.1 mouse_genomes_project 1 38573139 38623123 + MGP_CBAJ_P0019115 Inpp4a protein_coding protein_coding MGP_CBAJ_T0019116.1 MGP_CBAJ_G0015679.1 mouse_genomes_project 1 38584439 38619306 + MGP_CBAJ_P0019116 Inpp4a protein_coding protein_coding MGP_CBAJ_T0019117.1 MGP_CBAJ_G0015679.1 mouse_genomes_project 1 38584439 38619298 + MGP_CBAJ_P0019117 Inpp4a protein_coding protein_coding MGP_CBAJ_T0019118.1 MGP_CBAJ_G0015679.1 mouse_genomes_project 1 38584443 38619303 + MGP_CBAJ_P0019118 Inpp4a protein_coding protein_coding MGP_CBAJ_T0019119.1 MGP_CBAJ_G0015679.1 mouse_genomes_project 1 38592663 38595067 + Inpp4a protein_coding retained_intron MGP_CBAJ_T0019593.1 MGP_CBAJ_G0015773.1 mouse_genomes_project 1 58682469 58685645 + MGP_CBAJ_P0019593 Hspe1 protein_coding protein_coding MGP_CBAJ_T0019594.1 MGP_CBAJ_G0015773.1 mouse_genomes_project 1 58682651 58684253 + Hspe1 protein_coding retained_intron MGP_CBAJ_T0012045.1 MGP_CBAJ_G0010157.1 mouse_genomes_project 1 118756899 118759368 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011794.1 MGP_CBAJ_G0009906.1 mouse_genomes_project 1 21406927 21407374 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000515.1 MGP_CBAJ_G0000457.1 mouse_genomes_project 1 94300431 94303620 + TEC TEC MGP_CBAJ_T0019608.1 MGP_CBAJ_G0015776.1 mouse_genomes_project 1 58871823 58883121 + MGP_CBAJ_P0019608 Mars2 protein_coding protein_coding MGP_CBAJ_T0000353.1 MGP_CBAJ_G0000298.1 mouse_genomes_project 1 11785082 11791385 - TEC TEC MGP_CBAJ_T0020772.1 MGP_CBAJ_G0015993.1 mouse_genomes_project 1 94048545 94077031 + MGP_CBAJ_P0020772 Cops7b protein_coding protein_coding MGP_CBAJ_T0020773.1 MGP_CBAJ_G0015993.1 mouse_genomes_project 1 94048579 94054904 + MGP_CBAJ_P0020773 Cops7b protein_coding protein_coding MGP_CBAJ_T0020774.1 MGP_CBAJ_G0015993.1 mouse_genomes_project 1 94052710 94074159 + MGP_CBAJ_P0020774 Cops7b protein_coding protein_coding MGP_CBAJ_T0020775.1 MGP_CBAJ_G0015993.1 mouse_genomes_project 1 94052741 94073985 + MGP_CBAJ_P0020775 Cops7b protein_coding nonsense_mediated_decay MGP_CBAJ_T0020776.1 MGP_CBAJ_G0015993.1 mouse_genomes_project 1 94052752 94074637 + MGP_CBAJ_P0020776 Cops7b protein_coding nonsense_mediated_decay MGP_CBAJ_T0020777.1 MGP_CBAJ_G0015993.1 mouse_genomes_project 1 94062350 94068823 + Cops7b protein_coding processed_transcript MGP_CBAJ_T0011130.1 MGP_CBAJ_G0009268.1 mouse_genomes_project 1 144318420 144318773 - Gm25717 misc_RNA misc_RNA MGP_CBAJ_T0012223.1 MGP_CBAJ_G0010335.1 mouse_genomes_project 1 211883553 211883758 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097884.1 MGP_CBAJ_G0036157.1 mouse_genomes_project 1 183338756 183338874 - Gm24808 rRNA rRNA MGP_CBAJ_T0009413.1 MGP_CBAJ_G0007551.1 mouse_genomes_project 1 145502000 145502097 + Mir135b miRNA miRNA MGP_CBAJ_T0020445.1 MGP_CBAJ_G0015927.1 mouse_genomes_project 1 81445216 81453458 + MGP_CBAJ_P0020445 Des protein_coding protein_coding MGP_CBAJ_T0020446.1 MGP_CBAJ_G0015927.1 mouse_genomes_project 1 81446404 81447282 + Des protein_coding retained_intron MGP_CBAJ_T0020447.1 MGP_CBAJ_G0015927.1 mouse_genomes_project 1 81446908 81448517 + Des protein_coding retained_intron MGP_CBAJ_T0020689.1 MGP_CBAJ_G0015973.1 mouse_genomes_project 1 92398178 92415920 + MGP_CBAJ_P0020689 protein_coding protein_coding MGP_CBAJ_T0021093.1 MGP_CBAJ_G0016067.1 mouse_genomes_project 1 101234409 101275336 - MGP_CBAJ_P0021093 Ankmy1 protein_coding unknown_likely_coding MGP_CBAJ_T0021094.1 MGP_CBAJ_G0016067.1 mouse_genomes_project 1 101243316 101275659 - MGP_CBAJ_P0021094 Ankmy1 protein_coding protein_coding MGP_CBAJ_T0021095.1 MGP_CBAJ_G0016067.1 mouse_genomes_project 1 101243316 101275659 - MGP_CBAJ_P0021095 Ankmy1 protein_coding protein_coding MGP_CBAJ_T0011987.1 MGP_CBAJ_G0010099.1 mouse_genomes_project 1 90010747 90011387 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098534.1 MGP_CBAJ_G0036789.1 mouse_genomes_project 1 68346599 68346702 - Gm22281 snRNA snRNA MGP_CBAJ_T0002832.1 MGP_CBAJ_G0002669.1 mouse_genomes_project 1 149970825 149974071 - Gm37759 antisense antisense MGP_CBAJ_T0023427.1 MGP_CBAJ_G0016578.1 mouse_genomes_project 1 194865085 194866982 + MGP_CBAJ_P0023427 Gm38100 protein_coding protein_coding MGP_CBAJ_T0023428.1 MGP_CBAJ_G0016578.1 mouse_genomes_project 1 194865126 194866455 + MGP_CBAJ_P0023428 Gm38100 protein_coding protein_coding MGP_CBAJ_T0011792.1 MGP_CBAJ_G0009904.1 mouse_genomes_project 1 20604127 20605216 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023050.1 MGP_CBAJ_G0016476.1 mouse_genomes_project 1 189002655 189018850 - MGP_CBAJ_P0023050 Fcrla protein_coding protein_coding MGP_CBAJ_T0023051.1 MGP_CBAJ_G0016476.1 mouse_genomes_project 1 189002954 189009830 - MGP_CBAJ_P0023051 Fcrla protein_coding nonsense_mediated_decay MGP_CBAJ_T0023052.1 MGP_CBAJ_G0016476.1 mouse_genomes_project 1 189002960 189018850 - MGP_CBAJ_P0023052 Fcrla protein_coding protein_coding MGP_CBAJ_T0023053.1 MGP_CBAJ_G0016476.1 mouse_genomes_project 1 189008355 189018822 - MGP_CBAJ_P0023053 Fcrla protein_coding protein_coding MGP_CBAJ_T0023054.1 MGP_CBAJ_G0016476.1 mouse_genomes_project 1 189009057 189018827 - MGP_CBAJ_P0023054 Fcrla protein_coding protein_coding MGP_CBAJ_T0023055.1 MGP_CBAJ_G0016476.1 mouse_genomes_project 1 189009077 189018801 - Fcrla protein_coding processed_transcript MGP_CBAJ_T0000346.1 MGP_CBAJ_G0000291.1 mouse_genomes_project 1 11163802 11164353 - TEC TEC MGP_CBAJ_T0005918.1 MGP_CBAJ_G0004954.1 mouse_genomes_project 1 200775716 200778123 + Gm37406 lincRNA lincRNA MGP_CBAJ_T0002843.1 MGP_CBAJ_G0002678.1 mouse_genomes_project 1 167140659 167145100 - Gm10138 antisense antisense MGP_CBAJ_T0002844.1 MGP_CBAJ_G0002678.1 mouse_genomes_project 1 167143760 167146255 - Gm10138 antisense antisense MGP_CBAJ_T0002845.1 MGP_CBAJ_G0002678.1 mouse_genomes_project 1 167145386 167145760 - Gm10138 antisense pseudogene MGP_CBAJ_T0098545.1 MGP_CBAJ_G0036800.1 mouse_genomes_project 1 84291808 84291972 - Gm26263 snRNA snRNA MGP_CBAJ_T0000540.1 MGP_CBAJ_G0000482.1 mouse_genomes_project 1 106626594 106627779 - TEC TEC MGP_CBAJ_T0002788.1 MGP_CBAJ_G0002638.1 mouse_genomes_project 1 101280972 101283359 - 5033417F24Rik antisense antisense MGP_CBAJ_T0005652.1 MGP_CBAJ_G0004741.1 mouse_genomes_project 1 61072022 61089689 - BC055402 lincRNA lincRNA MGP_CBAJ_T0099789.1 MGP_CBAJ_G0038044.1 mouse_genomes_project 1 124763494 124763628 - Gm24937 snoRNA snoRNA MGP_CBAJ_T0011812.1 MGP_CBAJ_G0009924.1 mouse_genomes_project 1 29370472 29371022 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000530.1 MGP_CBAJ_G0000472.1 mouse_genomes_project 1 98977534 98979391 - TEC TEC MGP_CBAJ_T0023508.1 MGP_CBAJ_G0016597.1 mouse_genomes_project 1 199222119 199248285 + MGP_CBAJ_P0023508 Sccpdh protein_coding protein_coding MGP_CBAJ_T0023509.1 MGP_CBAJ_G0016597.1 mouse_genomes_project 1 199222119 199248285 + MGP_CBAJ_P0023509 Sccpdh protein_coding nonsense_mediated_decay MGP_CBAJ_T0023510.1 MGP_CBAJ_G0016597.1 mouse_genomes_project 1 199222169 199233656 + Sccpdh protein_coding retained_intron MGP_CBAJ_T0023511.1 MGP_CBAJ_G0016597.1 mouse_genomes_project 1 199239047 199247921 + MGP_CBAJ_P0023511 Sccpdh protein_coding protein_coding MGP_CBAJ_T0023512.1 MGP_CBAJ_G0016597.1 mouse_genomes_project 1 199239076 199245587 + MGP_CBAJ_P0023512 Sccpdh protein_coding protein_coding MGP_CBAJ_T0023513.1 MGP_CBAJ_G0016597.1 mouse_genomes_project 1 199244940 199247929 + Sccpdh protein_coding retained_intron MGP_CBAJ_T0005906.1 MGP_CBAJ_G0004943.1 mouse_genomes_project 1 189626153 189645661 - Gm26641 lincRNA lincRNA MGP_CBAJ_T0016785.1 MGP_CBAJ_G0014852.1 mouse_genomes_project 1 150292174 150295778 - 9230116N13Rik processed_transcript antisense MGP_CBAJ_T0016786.1 MGP_CBAJ_G0014852.1 mouse_genomes_project 1 150293101 150295753 - 9230116N13Rik processed_transcript retained_intron MGP_CBAJ_T0018847.1 MGP_CBAJ_G0015632.1 mouse_genomes_project 1 23568322 23646474 + MGP_CBAJ_P0018847 Col9a1 protein_coding protein_coding MGP_CBAJ_T0018848.1 MGP_CBAJ_G0015632.1 mouse_genomes_project 1 23589827 23646474 + MGP_CBAJ_P0018848 Col9a1 protein_coding protein_coding MGP_CBAJ_T0018849.1 MGP_CBAJ_G0015632.1 mouse_genomes_project 1 23591657 23614321 + Col9a1 protein_coding processed_transcript MGP_CBAJ_T0018850.1 MGP_CBAJ_G0015632.1 mouse_genomes_project 1 23623054 23624493 + Col9a1 protein_coding processed_transcript MGP_CBAJ_T0097870.1 MGP_CBAJ_G0036143.1 mouse_genomes_project 1 89543445 89543543 + n-R5s213 rRNA rRNA MGP_CBAJ_T0000700.1 MGP_CBAJ_G0000640.1 mouse_genomes_project 1 184039553 184040459 - TEC TEC MGP_CBAJ_T0022852.1 MGP_CBAJ_G0016429.1 mouse_genomes_project 1 182605384 182632769 - MGP_CBAJ_P0022852 Tbx19 protein_coding protein_coding MGP_CBAJ_T0022853.1 MGP_CBAJ_G0016429.1 mouse_genomes_project 1 182606418 182618506 - Tbx19 protein_coding processed_transcript MGP_CBAJ_T0022854.1 MGP_CBAJ_G0016429.1 mouse_genomes_project 1 182606476 182625726 - MGP_CBAJ_P0022854 Tbx19 protein_coding protein_coding MGP_CBAJ_T0022855.1 MGP_CBAJ_G0016429.1 mouse_genomes_project 1 182609968 182618191 - Tbx19 protein_coding processed_transcript MGP_CBAJ_T0021692.1 MGP_CBAJ_G0016199.1 mouse_genomes_project 1 144992223 145019803 + MGP_CBAJ_P0021692 Slc26a9 protein_coding protein_coding MGP_CBAJ_T0021693.1 MGP_CBAJ_G0016199.1 mouse_genomes_project 1 144992239 145012265 + MGP_CBAJ_P0021693 Slc26a9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021694.1 MGP_CBAJ_G0016199.1 mouse_genomes_project 1 144998613 144999318 + Slc26a9 protein_coding retained_intron MGP_CBAJ_T0021695.1 MGP_CBAJ_G0016199.1 mouse_genomes_project 1 144998721 145002216 + MGP_CBAJ_P0021695 Slc26a9 protein_coding protein_coding MGP_CBAJ_T0019926.1 MGP_CBAJ_G0015829.1 mouse_genomes_project 1 67861835 67897948 - MGP_CBAJ_P0019926 Gpr1 protein_coding protein_coding MGP_CBAJ_T0019927.1 MGP_CBAJ_G0015829.1 mouse_genomes_project 1 67889764 67897628 - Gpr1 protein_coding processed_transcript MGP_CBAJ_T0022066.1 MGP_CBAJ_G0016279.1 mouse_genomes_project 1 150037804 150063350 - MGP_CBAJ_P0022066 Mroh3 protein_coding protein_coding MGP_CBAJ_T0022067.1 MGP_CBAJ_G0016279.1 mouse_genomes_project 1 150037982 150047024 - MGP_CBAJ_P0022067 Mroh3 protein_coding protein_coding MGP_CBAJ_T0022068.1 MGP_CBAJ_G0016279.1 mouse_genomes_project 1 150037992 150039245 - Mroh3 protein_coding retained_intron MGP_CBAJ_T0022069.1 MGP_CBAJ_G0016279.1 mouse_genomes_project 1 150038116 150067629 - MGP_CBAJ_P0022069 Mroh3 protein_coding unknown_likely_coding MGP_CBAJ_T0022070.1 MGP_CBAJ_G0016279.1 mouse_genomes_project 1 150047096 150055852 - MGP_CBAJ_P0022070 Mroh3 protein_coding protein_coding MGP_CBAJ_T0020139.1 MGP_CBAJ_G0015873.1 mouse_genomes_project 1 78092462 78190569 + MGP_CBAJ_P0020139 Xrcc5 protein_coding protein_coding MGP_CBAJ_T0020140.1 MGP_CBAJ_G0015873.1 mouse_genomes_project 1 78092534 78190564 + MGP_CBAJ_P0020140 Xrcc5 protein_coding unknown_likely_coding MGP_CBAJ_T0099737.1 MGP_CBAJ_G0037992.1 mouse_genomes_project 1 14128087 14128219 + Gm25168 snoRNA snoRNA MGP_CBAJ_T0012217.1 MGP_CBAJ_G0010329.1 mouse_genomes_project 1 207410341 207411347 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005681.1 MGP_CBAJ_G0004764.1 mouse_genomes_project 1 73045579 73058316 + Gm15669 lincRNA lincRNA MGP_CBAJ_T0022740.1 MGP_CBAJ_G0016401.1 mouse_genomes_project 1 179743120 179774486 + MGP_CBAJ_P0022740 Vamp4 protein_coding protein_coding MGP_CBAJ_T0022741.1 MGP_CBAJ_G0016401.1 mouse_genomes_project 1 179743232 179757584 + Vamp4 protein_coding retained_intron MGP_CBAJ_T0022742.1 MGP_CBAJ_G0016401.1 mouse_genomes_project 1 179743248 179774485 + MGP_CBAJ_P0022742 Vamp4 protein_coding protein_coding MGP_CBAJ_T0022743.1 MGP_CBAJ_G0016401.1 mouse_genomes_project 1 179743433 179774480 + MGP_CBAJ_P0022743 Vamp4 protein_coding protein_coding MGP_CBAJ_T0022744.1 MGP_CBAJ_G0016401.1 mouse_genomes_project 1 179747426 179770156 + Vamp4 protein_coding processed_transcript MGP_CBAJ_T0098552.1 MGP_CBAJ_G0036807.1 mouse_genomes_project 1 107199896 107200003 + Gm24465 snRNA snRNA MGP_CBAJ_T0022703.1 MGP_CBAJ_G0016395.1 mouse_genomes_project 1 178875627 178883309 - MGP_CBAJ_P0022703 Fasl protein_coding protein_coding MGP_CBAJ_T0022704.1 MGP_CBAJ_G0016395.1 mouse_genomes_project 1 178876360 178883172 - MGP_CBAJ_P0022704 Fasl protein_coding protein_coding MGP_CBAJ_T0005594.1 MGP_CBAJ_G0004704.1 mouse_genomes_project 1 36967974 36972388 - Gm37146 lincRNA lincRNA MGP_CBAJ_T0002769.1 MGP_CBAJ_G0002620.1 mouse_genomes_project 1 81325583 81330686 + Gm28294 antisense antisense MGP_CBAJ_T0099786.1 MGP_CBAJ_G0038041.1 mouse_genomes_project 1 118227272 118227404 + Gm22438 snoRNA snoRNA MGP_CBAJ_T0011856.1 MGP_CBAJ_G0009968.1 mouse_genomes_project 1 45849423 45850702 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016738.1 MGP_CBAJ_G0014837.1 mouse_genomes_project 1 60804096 60807879 + 9130024F11Rik processed_transcript antisense MGP_CBAJ_T0016739.1 MGP_CBAJ_G0014837.1 mouse_genomes_project 1 60804164 60806291 + 9130024F11Rik processed_transcript antisense MGP_CBAJ_T0016740.1 MGP_CBAJ_G0014837.1 mouse_genomes_project 1 60804166 60891985 + 9130024F11Rik processed_transcript antisense MGP_CBAJ_T0016741.1 MGP_CBAJ_G0014837.1 mouse_genomes_project 1 60805018 60807875 + 9130024F11Rik processed_transcript TEC MGP_CBAJ_T0016742.1 MGP_CBAJ_G0014837.1 mouse_genomes_project 1 60889862 60899554 + 9130024F11Rik processed_transcript antisense MGP_CBAJ_T0021516.1 MGP_CBAJ_G0016160.1 mouse_genomes_project 1 138391254 139419817 - MGP_CBAJ_P0021516 Nckap5 protein_coding protein_coding MGP_CBAJ_T0021517.1 MGP_CBAJ_G0016160.1 mouse_genomes_project 1 138391254 139419817 - MGP_CBAJ_P0021517 Nckap5 protein_coding protein_coding MGP_CBAJ_T0021518.1 MGP_CBAJ_G0016160.1 mouse_genomes_project 1 138391265 139016535 - MGP_CBAJ_P0021518 Nckap5 protein_coding protein_coding MGP_CBAJ_T0021519.1 MGP_CBAJ_G0016160.1 mouse_genomes_project 1 138391937 138453292 - Nckap5 protein_coding processed_transcript MGP_CBAJ_T0021520.1 MGP_CBAJ_G0016160.1 mouse_genomes_project 1 138392359 138966032 - MGP_CBAJ_P0021520 Nckap5 protein_coding protein_coding MGP_CBAJ_T0021521.1 MGP_CBAJ_G0016160.1 mouse_genomes_project 1 138392359 138969124 - MGP_CBAJ_P0021521 Nckap5 protein_coding protein_coding MGP_CBAJ_T0021522.1 MGP_CBAJ_G0016160.1 mouse_genomes_project 1 138392576 138513053 - MGP_CBAJ_P0021522 Nckap5 protein_coding protein_coding MGP_CBAJ_T0021523.1 MGP_CBAJ_G0016160.1 mouse_genomes_project 1 138517816 138524951 - Nckap5 protein_coding processed_transcript MGP_CBAJ_T0021524.1 MGP_CBAJ_G0016160.1 mouse_genomes_project 1 138719659 139419984 - MGP_CBAJ_P0021524 Nckap5 protein_coding protein_coding MGP_CBAJ_T0021525.1 MGP_CBAJ_G0016160.1 mouse_genomes_project 1 138768108 139308982 - MGP_CBAJ_P0021525 Nckap5 protein_coding protein_coding MGP_CBAJ_T0021526.1 MGP_CBAJ_G0016160.1 mouse_genomes_project 1 139062463 139308970 - Nckap5 protein_coding retained_intron MGP_CBAJ_T0021527.1 MGP_CBAJ_G0016160.1 mouse_genomes_project 1 139065005 139419666 - Nckap5 protein_coding retained_intron MGP_CBAJ_T0021147.1 MGP_CBAJ_G0016078.1 mouse_genomes_project 1 101720382 101727023 - MGP_CBAJ_P0021147 Mterf4 protein_coding protein_coding MGP_CBAJ_T0021148.1 MGP_CBAJ_G0016078.1 mouse_genomes_project 1 101722374 101727075 - MGP_CBAJ_P0021148 Mterf4 protein_coding protein_coding MGP_CBAJ_T0021149.1 MGP_CBAJ_G0016078.1 mouse_genomes_project 1 101722597 101724063 - Mterf4 protein_coding processed_transcript MGP_CBAJ_T0021150.1 MGP_CBAJ_G0016078.1 mouse_genomes_project 1 101723086 101727024 - MGP_CBAJ_P0021150 Mterf4 protein_coding protein_coding MGP_CBAJ_T0021151.1 MGP_CBAJ_G0016078.1 mouse_genomes_project 1 101724658 101727039 - Mterf4 protein_coding retained_intron MGP_CBAJ_T0000773.1 MGP_CBAJ_G0000710.1 mouse_genomes_project 1 216255850 216258567 + TEC TEC MGP_CBAJ_T0020990.1 MGP_CBAJ_G0016043.1 mouse_genomes_project 1 99307584 99310254 + Rbm44 protein_coding retained_intron MGP_CBAJ_T0020991.1 MGP_CBAJ_G0016043.1 mouse_genomes_project 1 99307596 99315218 + MGP_CBAJ_P0020991 Rbm44 protein_coding protein_coding MGP_CBAJ_T0020992.1 MGP_CBAJ_G0016043.1 mouse_genomes_project 1 99307598 99341658 + MGP_CBAJ_P0020992 Rbm44 protein_coding protein_coding MGP_CBAJ_T0020993.1 MGP_CBAJ_G0016043.1 mouse_genomes_project 1 99339491 99341156 + Rbm44 protein_coding retained_intron MGP_CBAJ_T0011811.1 MGP_CBAJ_G0009923.1 mouse_genomes_project 1 29010123 29010430 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098593.1 MGP_CBAJ_G0036848.1 mouse_genomes_project 1 200506748 200506856 + Gm24836 snRNA snRNA MGP_CBAJ_T0099824.1 MGP_CBAJ_G0038079.1 mouse_genomes_project 1 191347739 191347862 - Gm26077 snoRNA snoRNA MGP_CBAJ_T0019320.1 MGP_CBAJ_G0015725.1 mouse_genomes_project 1 45810634 45895607 - MGP_CBAJ_P0019320 Uxs1 protein_coding protein_coding MGP_CBAJ_T0019321.1 MGP_CBAJ_G0015725.1 mouse_genomes_project 1 45813188 45895548 - MGP_CBAJ_P0019321 Uxs1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019322.1 MGP_CBAJ_G0015725.1 mouse_genomes_project 1 45829717 45895607 - MGP_CBAJ_P0019322 Uxs1 protein_coding protein_coding MGP_CBAJ_T0019323.1 MGP_CBAJ_G0015725.1 mouse_genomes_project 1 45836445 45894828 - Uxs1 protein_coding processed_transcript MGP_CBAJ_T0019324.1 MGP_CBAJ_G0015725.1 mouse_genomes_project 1 45836445 45895557 - MGP_CBAJ_P0019324 Uxs1 protein_coding protein_coding MGP_CBAJ_T0019325.1 MGP_CBAJ_G0015725.1 mouse_genomes_project 1 45839581 45895569 - Uxs1 protein_coding processed_transcript MGP_CBAJ_T0019326.1 MGP_CBAJ_G0015725.1 mouse_genomes_project 1 45843609 45895569 - MGP_CBAJ_P0019326 Uxs1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019327.1 MGP_CBAJ_G0015725.1 mouse_genomes_project 1 45854091 45895581 - MGP_CBAJ_P0019327 Uxs1 protein_coding protein_coding MGP_CBAJ_T0005884.1 MGP_CBAJ_G0004925.1 mouse_genomes_project 1 182059816 182091878 - lincRNA lincRNA MGP_CBAJ_T0012105.1 MGP_CBAJ_G0010217.1 mouse_genomes_project 1 147694148 147698163 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002811.1 MGP_CBAJ_G0002654.1 mouse_genomes_project 1 143923130 143924326 - Gm28857 antisense antisense MGP_CBAJ_T0021859.1 MGP_CBAJ_G0016235.1 mouse_genomes_project 1 147220499 147337429 - MGP_CBAJ_P0021859 Atp2b4 protein_coding protein_coding MGP_CBAJ_T0021860.1 MGP_CBAJ_G0016235.1 mouse_genomes_project 1 147222685 147222890 - MGP_CBAJ_P0021860 Atp2b4 protein_coding protein_coding MGP_CBAJ_T0021861.1 MGP_CBAJ_G0016235.1 mouse_genomes_project 1 147227830 147290300 - MGP_CBAJ_P0021861 Atp2b4 protein_coding protein_coding MGP_CBAJ_T0021862.1 MGP_CBAJ_G0016235.1 mouse_genomes_project 1 147227830 147290300 - MGP_CBAJ_P0021862 Atp2b4 protein_coding protein_coding MGP_CBAJ_T0021863.1 MGP_CBAJ_G0016235.1 mouse_genomes_project 1 147231467 147290234 - MGP_CBAJ_P0021863 Atp2b4 protein_coding protein_coding MGP_CBAJ_T0021864.1 MGP_CBAJ_G0016235.1 mouse_genomes_project 1 147244914 147289834 - MGP_CBAJ_P0021864 Atp2b4 protein_coding protein_coding MGP_CBAJ_T0021865.1 MGP_CBAJ_G0016235.1 mouse_genomes_project 1 147247256 147248863 - Atp2b4 protein_coding retained_intron MGP_CBAJ_T0021866.1 MGP_CBAJ_G0016235.1 mouse_genomes_project 1 147290252 147337424 - Atp2b4 protein_coding processed_transcript MGP_CBAJ_T0000495.1 MGP_CBAJ_G0000437.1 mouse_genomes_project 1 86914041 86915750 - TEC TEC MGP_CBAJ_T0005820.1 MGP_CBAJ_G0004875.1 mouse_genomes_project 1 148084951 148088922 + Platr1 lincRNA lincRNA MGP_CBAJ_T0020347.1 MGP_CBAJ_G0015916.1 mouse_genomes_project 1 81242679 81251354 - MGP_CBAJ_P0020347 Abcb6 protein_coding protein_coding MGP_CBAJ_T0020348.1 MGP_CBAJ_G0015916.1 mouse_genomes_project 1 81242681 81251248 - Abcb6 protein_coding retained_intron MGP_CBAJ_T0020349.1 MGP_CBAJ_G0015916.1 mouse_genomes_project 1 81242720 81243832 - MGP_CBAJ_P0020349 Abcb6 protein_coding protein_coding MGP_CBAJ_T0020350.1 MGP_CBAJ_G0015916.1 mouse_genomes_project 1 81243682 81251248 - Abcb6 protein_coding retained_intron MGP_CBAJ_T0020351.1 MGP_CBAJ_G0015916.1 mouse_genomes_project 1 81246514 81249911 - Abcb6 protein_coding retained_intron MGP_CBAJ_T0020352.1 MGP_CBAJ_G0015916.1 mouse_genomes_project 1 81248871 81251338 - Abcb6 protein_coding retained_intron MGP_CBAJ_T0000747.1 MGP_CBAJ_G0000685.1 mouse_genomes_project 1 206523257 206523745 + TEC TEC MGP_CBAJ_T0098520.1 MGP_CBAJ_G0036775.1 mouse_genomes_project 1 33150634 33150697 - Gm24732 snRNA snRNA MGP_CBAJ_T0022279.1 MGP_CBAJ_G0016321.1 mouse_genomes_project 1 167168733 167244892 - MGP_CBAJ_P0022279 Swt1 protein_coding protein_coding MGP_CBAJ_T0022280.1 MGP_CBAJ_G0016321.1 mouse_genomes_project 1 167169396 167244873 - MGP_CBAJ_P0022280 Swt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022281.1 MGP_CBAJ_G0016321.1 mouse_genomes_project 1 167171441 167175887 - Swt1 protein_coding retained_intron MGP_CBAJ_T0022282.1 MGP_CBAJ_G0016321.1 mouse_genomes_project 1 167184128 167189205 - Swt1 protein_coding retained_intron MGP_CBAJ_T0022283.1 MGP_CBAJ_G0016321.1 mouse_genomes_project 1 167199496 167217500 - MGP_CBAJ_P0022283 Swt1 protein_coding protein_coding MGP_CBAJ_T0022284.1 MGP_CBAJ_G0016321.1 mouse_genomes_project 1 167213643 167237883 - MGP_CBAJ_P0022284 Swt1 protein_coding protein_coding MGP_CBAJ_T0022285.1 MGP_CBAJ_G0016321.1 mouse_genomes_project 1 167214278 167219074 - Swt1 protein_coding retained_intron MGP_CBAJ_T0022286.1 MGP_CBAJ_G0016321.1 mouse_genomes_project 1 167225609 167227431 - Swt1 protein_coding retained_intron MGP_CBAJ_T0022287.1 MGP_CBAJ_G0016321.1 mouse_genomes_project 1 167230765 167237668 - Swt1 protein_coding retained_intron MGP_CBAJ_T0022288.1 MGP_CBAJ_G0016321.1 mouse_genomes_project 1 167243460 167244892 - Swt1 protein_coding retained_intron MGP_CBAJ_T0009363.1 MGP_CBAJ_G0007501.1 mouse_genomes_project 1 37580371 37580512 + miRNA miRNA MGP_CBAJ_T0019050.1 MGP_CBAJ_G0015670.1 mouse_genomes_project 1 37615352 37628773 - MGP_CBAJ_P0019050 Ankrd39 protein_coding protein_coding MGP_CBAJ_T0012015.1 MGP_CBAJ_G0010127.1 mouse_genomes_project 1 105619040 105619791 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097872.1 MGP_CBAJ_G0036145.1 mouse_genomes_project 1 93009231 93009335 + n-R5s215 rRNA rRNA MGP_CBAJ_T0023471.1 MGP_CBAJ_G0016587.1 mouse_genomes_project 1 197228880 197593464 + MGP_CBAJ_P0023471 Desi2 protein_coding protein_coding MGP_CBAJ_T0023472.1 MGP_CBAJ_G0016587.1 mouse_genomes_project 1 197501577 197597272 + MGP_CBAJ_P0023472 Desi2 protein_coding protein_coding MGP_CBAJ_T0023473.1 MGP_CBAJ_G0016587.1 mouse_genomes_project 1 197501692 197606115 + MGP_CBAJ_P0023473 Desi2 protein_coding protein_coding MGP_CBAJ_T0023474.1 MGP_CBAJ_G0016587.1 mouse_genomes_project 1 197604916 197606109 + MGP_CBAJ_P0023474 Desi2 protein_coding protein_coding MGP_CBAJ_T0023465.1 MGP_CBAJ_G0016584.1 mouse_genomes_project 1 196868080 196891430 + MGP_CBAJ_P0023465 1700016C15Rik protein_coding protein_coding MGP_CBAJ_T0005734.1 MGP_CBAJ_G0004802.1 mouse_genomes_project 1 96325394 96331306 + Gm28888 lincRNA lincRNA MGP_CBAJ_T0000363.1 MGP_CBAJ_G0000308.1 mouse_genomes_project 1 18434802 18438364 + TEC TEC MGP_CBAJ_T0021532.1 MGP_CBAJ_G0016162.1 mouse_genomes_project 1 140178191 140392806 - MGP_CBAJ_P0021532 Tmem163 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021533.1 MGP_CBAJ_G0016162.1 mouse_genomes_project 1 140178203 140392731 - MGP_CBAJ_P0021533 Tmem163 protein_coding protein_coding MGP_CBAJ_T0021534.1 MGP_CBAJ_G0016162.1 mouse_genomes_project 1 140182573 140394260 - MGP_CBAJ_P0021534 Tmem163 protein_coding protein_coding MGP_CBAJ_T0021535.1 MGP_CBAJ_G0016162.1 mouse_genomes_project 1 140183036 140193218 - Tmem163 protein_coding retained_intron MGP_CBAJ_T0021536.1 MGP_CBAJ_G0016162.1 mouse_genomes_project 1 140183220 140235524 - Tmem163 protein_coding processed_transcript MGP_CBAJ_T0019514.1 MGP_CBAJ_G0015756.1 mouse_genomes_project 1 56255249 56261768 + MGP_CBAJ_P0019514 Mstn protein_coding protein_coding MGP_CBAJ_T0019515.1 MGP_CBAJ_G0015756.1 mouse_genomes_project 1 56255266 56261734 + MGP_CBAJ_P0019515 Mstn protein_coding protein_coding MGP_CBAJ_T0005874.1 MGP_CBAJ_G0004916.1 mouse_genomes_project 1 177739017 177743142 + lincRNA lincRNA MGP_CBAJ_T0022776.1 MGP_CBAJ_G0016407.1 mouse_genomes_project 1 180089477 180121376 - MGP_CBAJ_P0022776 Fmo2 protein_coding protein_coding MGP_CBAJ_T0022777.1 MGP_CBAJ_G0016407.1 mouse_genomes_project 1 180089482 180103636 - Fmo2 protein_coding retained_intron MGP_CBAJ_T0022778.1 MGP_CBAJ_G0016407.1 mouse_genomes_project 1 180091596 180121329 - MGP_CBAJ_P0022778 Fmo2 protein_coding protein_coding MGP_CBAJ_T0022779.1 MGP_CBAJ_G0016407.1 mouse_genomes_project 1 180093199 180095886 - Fmo2 protein_coding processed_transcript MGP_CBAJ_T0022780.1 MGP_CBAJ_G0016407.1 mouse_genomes_project 1 180104688 180121148 - MGP_CBAJ_P0022780 Fmo2 protein_coding protein_coding MGP_CBAJ_T0022781.1 MGP_CBAJ_G0016407.1 mouse_genomes_project 1 180105198 180121390 - Fmo2 protein_coding retained_intron MGP_CBAJ_T0022782.1 MGP_CBAJ_G0016407.1 mouse_genomes_project 1 180120344 180121384 - Fmo2 protein_coding retained_intron MGP_CBAJ_T0018774.1 MGP_CBAJ_G0015613.1 mouse_genomes_project 1 18918627 19522432 - MGP_CBAJ_P0018774 Pkhd1 protein_coding protein_coding MGP_CBAJ_T0018775.1 MGP_CBAJ_G0015613.1 mouse_genomes_project 1 19277212 19311288 - Pkhd1 protein_coding processed_transcript MGP_CBAJ_T0018776.1 MGP_CBAJ_G0015613.1 mouse_genomes_project 1 19494352 19522432 - Pkhd1 protein_coding retained_intron MGP_CBAJ_T0018777.1 MGP_CBAJ_G0015613.1 mouse_genomes_project 1 19509785 19522408 - Pkhd1 protein_coding processed_transcript MGP_CBAJ_T0018805.1 MGP_CBAJ_G0015624.1 mouse_genomes_project 1 20445795 21125079 - MGP_CBAJ_P0018805 Kcnq5 protein_coding protein_coding MGP_CBAJ_T0018806.1 MGP_CBAJ_G0015624.1 mouse_genomes_project 1 20445800 21125440 - MGP_CBAJ_P0018806 Kcnq5 protein_coding protein_coding MGP_CBAJ_T0018807.1 MGP_CBAJ_G0015624.1 mouse_genomes_project 1 20449544 21125079 - MGP_CBAJ_P0018807 Kcnq5 protein_coding protein_coding MGP_CBAJ_T0018808.1 MGP_CBAJ_G0015624.1 mouse_genomes_project 1 20449544 21125079 - MGP_CBAJ_P0018808 Kcnq5 protein_coding protein_coding MGP_CBAJ_T0018809.1 MGP_CBAJ_G0015624.1 mouse_genomes_project 1 20449544 21125079 - MGP_CBAJ_P0018809 Kcnq5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018810.1 MGP_CBAJ_G0015624.1 mouse_genomes_project 1 20535067 21125163 - Kcnq5 protein_coding retained_intron MGP_CBAJ_T0018811.1 MGP_CBAJ_G0015624.1 mouse_genomes_project 1 20597468 20713220 - MGP_CBAJ_P0018811 Kcnq5 protein_coding unknown_likely_coding MGP_CBAJ_T0018812.1 MGP_CBAJ_G0015624.1 mouse_genomes_project 1 20688296 21007874 - Kcnq5 protein_coding processed_transcript MGP_CBAJ_T0011890.1 MGP_CBAJ_G0010002.1 mouse_genomes_project 1 53093509 53094262 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0020045.1 MGP_CBAJ_G0015855.1 mouse_genomes_project 1 71533731 71787281 + MGP_CBAJ_P0020045 Unc80 protein_coding protein_coding MGP_CBAJ_T0020046.1 MGP_CBAJ_G0015855.1 mouse_genomes_project 1 71533778 71578606 + MGP_CBAJ_P0020046 Unc80 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020047.1 MGP_CBAJ_G0015855.1 mouse_genomes_project 1 71533794 71554844 + Unc80 protein_coding retained_intron MGP_CBAJ_T0020048.1 MGP_CBAJ_G0015855.1 mouse_genomes_project 1 71533811 71770620 + MGP_CBAJ_P0020048 Unc80 protein_coding unknown_likely_coding MGP_CBAJ_T0020049.1 MGP_CBAJ_G0015855.1 mouse_genomes_project 1 71761476 71762054 + Unc80 protein_coding retained_intron MGP_CBAJ_T0020050.1 MGP_CBAJ_G0015855.1 mouse_genomes_project 1 71767462 71784064 + MGP_CBAJ_P0020050 Unc80 protein_coding protein_coding MGP_CBAJ_T0019724.1 MGP_CBAJ_G0015797.1 mouse_genomes_project 1 62598634 62607886 + MGP_CBAJ_P0019724 Ndufb3 protein_coding protein_coding MGP_CBAJ_T0009419.1 MGP_CBAJ_G0007557.1 mouse_genomes_project 1 152026468 152026548 + Mir181b-1 miRNA miRNA MGP_CBAJ_T0000680.1 MGP_CBAJ_G0000620.1 mouse_genomes_project 1 177567609 177569899 - TEC TEC MGP_CBAJ_T0009403.1 MGP_CBAJ_G0007541.1 mouse_genomes_project 1 101781023 101781151 + Mir6345 miRNA miRNA MGP_CBAJ_T0018495.1 MGP_CBAJ_G0015563.1 mouse_genomes_project 1 3278144 3281836 - MGP_CBAJ_P0018495 Npbwr1 protein_coding protein_coding MGP_CBAJ_T0018760.1 MGP_CBAJ_G0015608.1 mouse_genomes_project 1 16736867 16765781 - Crisp4 protein_coding retained_intron MGP_CBAJ_T0018761.1 MGP_CBAJ_G0015608.1 mouse_genomes_project 1 16736867 16765787 - MGP_CBAJ_P0018761 Crisp4 protein_coding protein_coding MGP_CBAJ_T0018762.1 MGP_CBAJ_G0015608.1 mouse_genomes_project 1 16736880 16758777 - MGP_CBAJ_P0018762 Crisp4 protein_coding protein_coding MGP_CBAJ_T0018763.1 MGP_CBAJ_G0015608.1 mouse_genomes_project 1 16737276 16765787 - MGP_CBAJ_P0018763 Crisp4 protein_coding protein_coding MGP_CBAJ_T0023163.1 MGP_CBAJ_G0016495.1 mouse_genomes_project 1 189531292 189538771 - Nit1 protein_coding retained_intron MGP_CBAJ_T0023164.1 MGP_CBAJ_G0016495.1 mouse_genomes_project 1 189531292 189538918 - MGP_CBAJ_P0023164 Nit1 protein_coding protein_coding MGP_CBAJ_T0023165.1 MGP_CBAJ_G0016495.1 mouse_genomes_project 1 189533851 189538936 - MGP_CBAJ_P0023165 Nit1 protein_coding protein_coding MGP_CBAJ_T0023166.1 MGP_CBAJ_G0016495.1 mouse_genomes_project 1 189534609 189538930 - Nit1 protein_coding retained_intron MGP_CBAJ_T0023167.1 MGP_CBAJ_G0016495.1 mouse_genomes_project 1 189535520 189538935 - MGP_CBAJ_P0023167 Nit1 protein_coding protein_coding MGP_CBAJ_T0023168.1 MGP_CBAJ_G0016495.1 mouse_genomes_project 1 189537053 189538915 - MGP_CBAJ_P0023168 Nit1 protein_coding protein_coding MGP_CBAJ_T0023169.1 MGP_CBAJ_G0016495.1 mouse_genomes_project 1 189537108 189537754 - Nit1 protein_coding retained_intron MGP_CBAJ_T0023170.1 MGP_CBAJ_G0016495.1 mouse_genomes_project 1 189537427 189538935 - MGP_CBAJ_P0023170 Nit1 protein_coding protein_coding MGP_CBAJ_T0016834.1 MGP_CBAJ_G0014866.1 mouse_genomes_project 1 196576017 196578179 + Gm29856 processed_transcript processed_transcript MGP_CBAJ_T0016835.1 MGP_CBAJ_G0014866.1 mouse_genomes_project 1 196577157 196578180 + Gm29856 processed_transcript processed_transcript MGP_CBAJ_T0021242.1 MGP_CBAJ_G0016099.1 mouse_genomes_project 1 106804034 106813131 - Ppip5k2 protein_coding retained_intron MGP_CBAJ_T0021243.1 MGP_CBAJ_G0016099.1 mouse_genomes_project 1 106804034 106877854 - MGP_CBAJ_P0021243 Ppip5k2 protein_coding protein_coding MGP_CBAJ_T0021244.1 MGP_CBAJ_G0016099.1 mouse_genomes_project 1 106804034 106877854 - MGP_CBAJ_P0021244 Ppip5k2 protein_coding protein_coding MGP_CBAJ_T0021245.1 MGP_CBAJ_G0016099.1 mouse_genomes_project 1 106805651 106867083 - MGP_CBAJ_P0021245 Ppip5k2 protein_coding protein_coding MGP_CBAJ_T0021246.1 MGP_CBAJ_G0016099.1 mouse_genomes_project 1 106809415 106814528 - MGP_CBAJ_P0021246 Ppip5k2 protein_coding protein_coding MGP_CBAJ_T0021247.1 MGP_CBAJ_G0016099.1 mouse_genomes_project 1 106816766 106819274 - Ppip5k2 protein_coding retained_intron MGP_CBAJ_T0021248.1 MGP_CBAJ_G0016099.1 mouse_genomes_project 1 106844400 106848359 - Ppip5k2 protein_coding retained_intron MGP_CBAJ_T0099783.1 MGP_CBAJ_G0038038.1 mouse_genomes_project 1 112693694 112693828 - Gm22034 snoRNA snoRNA MGP_CBAJ_T0012156.1 MGP_CBAJ_G0010268.1 mouse_genomes_project 1 172168081 172168340 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000366.1 MGP_CBAJ_G0000311.1 mouse_genomes_project 1 20523498 20525825 - TEC TEC MGP_CBAJ_T0005615.1 MGP_CBAJ_G0004720.1 mouse_genomes_project 1 44528046 44639282 - Pantr1 lincRNA lincRNA MGP_CBAJ_T0005616.1 MGP_CBAJ_G0004720.1 mouse_genomes_project 1 44587856 44637569 - Pantr1 lincRNA lincRNA MGP_CBAJ_T0005617.1 MGP_CBAJ_G0004720.1 mouse_genomes_project 1 44587862 44608927 - Pantr1 lincRNA lincRNA MGP_CBAJ_T0005618.1 MGP_CBAJ_G0004720.1 mouse_genomes_project 1 44587863 44639299 - Pantr1 lincRNA lincRNA MGP_CBAJ_T0005619.1 MGP_CBAJ_G0004720.1 mouse_genomes_project 1 44587863 44639299 - Pantr1 lincRNA lincRNA MGP_CBAJ_T0005620.1 MGP_CBAJ_G0004720.1 mouse_genomes_project 1 44587863 44591344 - Pantr1 lincRNA lincRNA MGP_CBAJ_T0005621.1 MGP_CBAJ_G0004720.1 mouse_genomes_project 1 44587863 44637594 - Pantr1 lincRNA lincRNA MGP_CBAJ_T0005622.1 MGP_CBAJ_G0004720.1 mouse_genomes_project 1 44587864 44637534 - Pantr1 lincRNA lincRNA MGP_CBAJ_T0005623.1 MGP_CBAJ_G0004720.1 mouse_genomes_project 1 44587864 44609608 - Pantr1 lincRNA lincRNA MGP_CBAJ_T0005624.1 MGP_CBAJ_G0004720.1 mouse_genomes_project 1 44588041 44608848 - Pantr1 lincRNA lincRNA MGP_CBAJ_T0005625.1 MGP_CBAJ_G0004720.1 mouse_genomes_project 1 44608787 44639316 - Pantr1 lincRNA lincRNA MGP_CBAJ_T0005626.1 MGP_CBAJ_G0004720.1 mouse_genomes_project 1 44637467 44639299 - Pantr1 lincRNA lincRNA MGP_CBAJ_T0098513.1 MGP_CBAJ_G0036768.1 mouse_genomes_project 1 8392434 8392541 - Gm25253 snRNA snRNA MGP_CBAJ_T0022071.1 MGP_CBAJ_G0016280.1 mouse_genomes_project 1 150071652 150092364 - MGP_CBAJ_P0022071 5730559C18Rik protein_coding protein_coding MGP_CBAJ_T0022072.1 MGP_CBAJ_G0016280.1 mouse_genomes_project 1 150078391 150088403 - MGP_CBAJ_P0022072 5730559C18Rik protein_coding protein_coding MGP_CBAJ_T0022073.1 MGP_CBAJ_G0016280.1 mouse_genomes_project 1 150078429 150088424 - MGP_CBAJ_P0022073 5730559C18Rik protein_coding protein_coding MGP_CBAJ_T0022074.1 MGP_CBAJ_G0016280.1 mouse_genomes_project 1 150081676 150085776 - 5730559C18Rik protein_coding retained_intron MGP_CBAJ_T0022075.1 MGP_CBAJ_G0016280.1 mouse_genomes_project 1 150084306 150092219 - MGP_CBAJ_P0022075 5730559C18Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0022076.1 MGP_CBAJ_G0016280.1 mouse_genomes_project 1 150084327 150088133 - MGP_CBAJ_P0022076 5730559C18Rik protein_coding protein_coding MGP_CBAJ_T0005863.1 MGP_CBAJ_G0004909.1 mouse_genomes_project 1 171318361 171340668 - Gm9530 lincRNA lincRNA MGP_CBAJ_T0021979.1 MGP_CBAJ_G0016263.1 mouse_genomes_project 1 149063649 149086428 - MGP_CBAJ_P0021979 Timm17a protein_coding protein_coding MGP_CBAJ_T0021980.1 MGP_CBAJ_G0016263.1 mouse_genomes_project 1 149073450 149082558 - Timm17a protein_coding retained_intron MGP_CBAJ_T0021981.1 MGP_CBAJ_G0016263.1 mouse_genomes_project 1 149076122 149086341 - MGP_CBAJ_P0021981 Timm17a protein_coding protein_coding MGP_CBAJ_T0021982.1 MGP_CBAJ_G0016263.1 mouse_genomes_project 1 149081855 149084048 - MGP_CBAJ_P0021982 Timm17a protein_coding protein_coding MGP_CBAJ_T0020908.1 MGP_CBAJ_G0016019.1 mouse_genomes_project 1 95831931 95995691 + MGP_CBAJ_P0020908 protein_coding protein_coding MGP_CBAJ_T0020910.1 MGP_CBAJ_G0016019.1 mouse_genomes_project 1 95838077 95995699 + MGP_CBAJ_P0020910 protein_coding protein_coding MGP_CBAJ_T0022692.1 MGP_CBAJ_G0016392.1 mouse_genomes_project 1 178248664 178259811 - MGP_CBAJ_P0022692 Prdx6 protein_coding protein_coding MGP_CBAJ_T0022693.1 MGP_CBAJ_G0016392.1 mouse_genomes_project 1 178249590 178259778 - MGP_CBAJ_P0022693 Prdx6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022694.1 MGP_CBAJ_G0016392.1 mouse_genomes_project 1 178250139 178259761 - Prdx6 protein_coding processed_transcript MGP_CBAJ_T0022695.1 MGP_CBAJ_G0016392.1 mouse_genomes_project 1 178250173 178259758 - MGP_CBAJ_P0022695 Prdx6 protein_coding protein_coding MGP_CBAJ_T0022696.1 MGP_CBAJ_G0016392.1 mouse_genomes_project 1 178250210 178259713 - Prdx6 protein_coding processed_transcript MGP_CBAJ_T0022697.1 MGP_CBAJ_G0016392.1 mouse_genomes_project 1 178250383 178259146 - Prdx6 protein_coding processed_transcript MGP_CBAJ_T0022698.1 MGP_CBAJ_G0016392.1 mouse_genomes_project 1 178252206 178259758 - Prdx6 protein_coding processed_transcript MGP_CBAJ_T0022699.1 MGP_CBAJ_G0016392.1 mouse_genomes_project 1 178257204 178259754 - Prdx6 protein_coding retained_intron MGP_CBAJ_T0022700.1 MGP_CBAJ_G0016392.1 mouse_genomes_project 1 178258162 178259754 - Prdx6 protein_coding retained_intron MGP_CBAJ_T0012004.1 MGP_CBAJ_G0010116.1 mouse_genomes_project 1 99342290 99343010 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000470.1 MGP_CBAJ_G0000412.1 mouse_genomes_project 1 71913646 71915827 + TEC TEC MGP_CBAJ_T0002873.1 MGP_CBAJ_G0002701.1 mouse_genomes_project 1 183416716 183417606 - Gm37469 antisense antisense MGP_CBAJ_T0000563.1 MGP_CBAJ_G0000505.1 mouse_genomes_project 1 135595301 135598811 - TEC TEC MGP_CBAJ_T0005723.1 MGP_CBAJ_G0004793.1 mouse_genomes_project 1 87036069 87039494 + Gm29125 lincRNA lincRNA MGP_CBAJ_T0019536.1 MGP_CBAJ_G0015762.1 mouse_genomes_project 1 56578281 56586054 - MGP_CBAJ_P0019536 Asnsd1 protein_coding protein_coding MGP_CBAJ_T0019537.1 MGP_CBAJ_G0015762.1 mouse_genomes_project 1 56578309 56586054 - MGP_CBAJ_P0019537 Asnsd1 protein_coding protein_coding MGP_CBAJ_T0019538.1 MGP_CBAJ_G0015762.1 mouse_genomes_project 1 56581132 56586054 - MGP_CBAJ_P0019538 Asnsd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019539.1 MGP_CBAJ_G0015762.1 mouse_genomes_project 1 56581539 56584577 - MGP_CBAJ_P0019539 Asnsd1 protein_coding protein_coding MGP_CBAJ_T0019540.1 MGP_CBAJ_G0015762.1 mouse_genomes_project 1 56583618 56585872 - Asnsd1 protein_coding retained_intron MGP_CBAJ_T0011955.1 MGP_CBAJ_G0010067.1 mouse_genomes_project 1 71888703 71891237 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021324.1 MGP_CBAJ_G0016114.1 mouse_genomes_project 1 117055656 117082203 + MGP_CBAJ_P0021324 Serpinb5 protein_coding protein_coding MGP_CBAJ_T0021325.1 MGP_CBAJ_G0016114.1 mouse_genomes_project 1 117055657 117079198 + MGP_CBAJ_P0021325 Serpinb5 protein_coding protein_coding MGP_CBAJ_T0021326.1 MGP_CBAJ_G0016114.1 mouse_genomes_project 1 117055686 117082203 + MGP_CBAJ_P0021326 Serpinb5 protein_coding protein_coding MGP_CBAJ_T0021327.1 MGP_CBAJ_G0016114.1 mouse_genomes_project 1 117069084 117082202 + MGP_CBAJ_P0021327 Serpinb5 protein_coding protein_coding MGP_CBAJ_T0011835.1 MGP_CBAJ_G0009947.1 mouse_genomes_project 1 35412295 35412770 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018765.1 MGP_CBAJ_G0015610.1 mouse_genomes_project 1 16882259 16898638 - MGP_CBAJ_P0018765 Defb41 protein_coding protein_coding MGP_CBAJ_T0018766.1 MGP_CBAJ_G0015610.1 mouse_genomes_project 1 16893999 16898580 - MGP_CBAJ_P0018766 Defb41 protein_coding protein_coding MGP_CBAJ_T0020158.1 MGP_CBAJ_G0015880.1 mouse_genomes_project 1 78918190 78919026 - MGP_CBAJ_P0020158 Tnp1 protein_coding protein_coding MGP_CBAJ_T0019526.1 MGP_CBAJ_G0015759.1 mouse_genomes_project 1 56525722 56530581 + Ormdl1 protein_coding retained_intron MGP_CBAJ_T0019527.1 MGP_CBAJ_G0015759.1 mouse_genomes_project 1 56525722 56536845 + MGP_CBAJ_P0019527 Ormdl1 protein_coding protein_coding MGP_CBAJ_T0011893.1 MGP_CBAJ_G0010005.1 mouse_genomes_project 1 55033927 55034339 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002805.1 MGP_CBAJ_G0002649.1 mouse_genomes_project 1 133515940 133519848 - Gm15392 antisense antisense MGP_CBAJ_T0000704.1 MGP_CBAJ_G0000644.1 mouse_genomes_project 1 189550034 189551291 + TEC TEC MGP_CBAJ_T0101510.1 MGP_CBAJ_G0039542.1 mouse_genomes_project 1 200730702 200730813 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0011900.1 MGP_CBAJ_G0010012.1 mouse_genomes_project 1 56597841 56598164 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011787.1 MGP_CBAJ_G0009899.1 mouse_genomes_project 1 19887521 19888722 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099821.1 MGP_CBAJ_G0038076.1 mouse_genomes_project 1 182941398 182941483 + Gm24637 snoRNA snoRNA MGP_CBAJ_T0021987.1 MGP_CBAJ_G0016266.1 mouse_genomes_project 1 149160065 149218091 - MGP_CBAJ_P0021987 Ipo9 protein_coding protein_coding MGP_CBAJ_T0021988.1 MGP_CBAJ_G0016266.1 mouse_genomes_project 1 149162224 149218050 - MGP_CBAJ_P0021988 Ipo9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021989.1 MGP_CBAJ_G0016266.1 mouse_genomes_project 1 149162224 149218083 - MGP_CBAJ_P0021989 Ipo9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021990.1 MGP_CBAJ_G0016266.1 mouse_genomes_project 1 149162868 149166352 - MGP_CBAJ_P0021990 Ipo9 protein_coding protein_coding MGP_CBAJ_T0021991.1 MGP_CBAJ_G0016266.1 mouse_genomes_project 1 149163556 149166307 - Ipo9 protein_coding retained_intron MGP_CBAJ_T0021992.1 MGP_CBAJ_G0016266.1 mouse_genomes_project 1 149164038 149166458 - Ipo9 protein_coding retained_intron MGP_CBAJ_T0021993.1 MGP_CBAJ_G0016266.1 mouse_genomes_project 1 149164143 149165317 - Ipo9 protein_coding retained_intron MGP_CBAJ_T0021994.1 MGP_CBAJ_G0016266.1 mouse_genomes_project 1 149166373 149167551 - Ipo9 protein_coding retained_intron MGP_CBAJ_T0021995.1 MGP_CBAJ_G0016266.1 mouse_genomes_project 1 149167194 149190039 - Ipo9 protein_coding processed_transcript MGP_CBAJ_T0021996.1 MGP_CBAJ_G0016266.1 mouse_genomes_project 1 149171852 149190130 - Ipo9 protein_coding retained_intron MGP_CBAJ_T0021997.1 MGP_CBAJ_G0016266.1 mouse_genomes_project 1 149189017 149218025 - MGP_CBAJ_P0021997 Ipo9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021998.1 MGP_CBAJ_G0016266.1 mouse_genomes_project 1 149192690 149193810 - Ipo9 protein_coding retained_intron MGP_CBAJ_T0021999.1 MGP_CBAJ_G0016266.1 mouse_genomes_project 1 149193140 149206682 - Ipo9 protein_coding retained_intron MGP_CBAJ_T0022000.1 MGP_CBAJ_G0016266.1 mouse_genomes_project 1 149194526 149218011 - MGP_CBAJ_P0022000 Ipo9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019129.1 MGP_CBAJ_G0015682.1 mouse_genomes_project 1 38661667 38782656 - MGP_CBAJ_P0019129 Mgat4a protein_coding protein_coding MGP_CBAJ_T0019130.1 MGP_CBAJ_G0015682.1 mouse_genomes_project 1 38666007 38774352 - MGP_CBAJ_P0019130 Mgat4a protein_coding protein_coding MGP_CBAJ_T0019131.1 MGP_CBAJ_G0015682.1 mouse_genomes_project 1 38690667 38723789 - MGP_CBAJ_P0019131 Mgat4a protein_coding nonsense_mediated_decay MGP_CBAJ_T0019132.1 MGP_CBAJ_G0015682.1 mouse_genomes_project 1 38690670 38723751 - MGP_CBAJ_P0019132 Mgat4a protein_coding protein_coding MGP_CBAJ_T0019133.1 MGP_CBAJ_G0015682.1 mouse_genomes_project 1 38723381 38726494 - Mgat4a protein_coding retained_intron MGP_CBAJ_T0019134.1 MGP_CBAJ_G0015682.1 mouse_genomes_project 1 38771161 38774199 - Mgat4a protein_coding retained_intron MGP_CBAJ_T0005917.1 MGP_CBAJ_G0004953.1 mouse_genomes_project 1 200470299 200476764 + Gm17275 lincRNA lincRNA MGP_CBAJ_T0011132.1 MGP_CBAJ_G0009270.1 mouse_genomes_project 1 182999136 182999387 - Gm23599 misc_RNA misc_RNA MGP_CBAJ_T0020926.1 MGP_CBAJ_G0016028.1 mouse_genomes_project 1 96267928 96287187 + MGP_CBAJ_P0020926 Spp2 protein_coding protein_coding MGP_CBAJ_T0020927.1 MGP_CBAJ_G0016028.1 mouse_genomes_project 1 96268184 96287183 + MGP_CBAJ_P0020927 Spp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021496.1 MGP_CBAJ_G0016156.1 mouse_genomes_project 1 137859417 137906000 - MGP_CBAJ_P0021496 Actr3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0021497.1 MGP_CBAJ_G0016156.1 mouse_genomes_project 1 137859522 137905847 - MGP_CBAJ_P0021497 Actr3 protein_coding protein_coding MGP_CBAJ_T0021498.1 MGP_CBAJ_G0016156.1 mouse_genomes_project 1 137861859 137863685 - Actr3 protein_coding retained_intron MGP_CBAJ_T0021499.1 MGP_CBAJ_G0016156.1 mouse_genomes_project 1 137871198 137874276 - Actr3 protein_coding retained_intron MGP_CBAJ_T0021500.1 MGP_CBAJ_G0016156.1 mouse_genomes_project 1 137871217 137906246 - MGP_CBAJ_P0021500 Actr3 protein_coding protein_coding MGP_CBAJ_T0021501.1 MGP_CBAJ_G0016156.1 mouse_genomes_project 1 137871247 137905114 - MGP_CBAJ_P0021501 Actr3 protein_coding protein_coding MGP_CBAJ_T0021502.1 MGP_CBAJ_G0016156.1 mouse_genomes_project 1 137872626 137905973 - MGP_CBAJ_P0021502 Actr3 protein_coding protein_coding MGP_CBAJ_T0021503.1 MGP_CBAJ_G0016156.1 mouse_genomes_project 1 137872683 137906226 - MGP_CBAJ_P0021503 Actr3 protein_coding protein_coding MGP_CBAJ_T0021504.1 MGP_CBAJ_G0016156.1 mouse_genomes_project 1 137872692 137905989 - MGP_CBAJ_P0021504 Actr3 protein_coding protein_coding MGP_CBAJ_T0021505.1 MGP_CBAJ_G0016156.1 mouse_genomes_project 1 137886421 137905947 - Actr3 protein_coding retained_intron MGP_CBAJ_T0000744.1 MGP_CBAJ_G0000682.1 mouse_genomes_project 1 204568331 204569086 + TEC TEC MGP_CBAJ_T0005772.1 MGP_CBAJ_G0004836.1 mouse_genomes_project 1 115096295 115110360 + Gm29012 lincRNA lincRNA MGP_CBAJ_T0000463.1 MGP_CBAJ_G0000405.1 mouse_genomes_project 1 67935775 67936254 - TEC TEC MGP_CBAJ_T0005719.1 MGP_CBAJ_G0004791.1 mouse_genomes_project 1 86813868 86821089 + 9830004L10Rik lincRNA lincRNA MGP_CBAJ_T0005720.1 MGP_CBAJ_G0004791.1 mouse_genomes_project 1 86814961 86821089 + 9830004L10Rik lincRNA lincRNA MGP_CBAJ_T0005721.1 MGP_CBAJ_G0004791.1 mouse_genomes_project 1 86814983 86821134 + 9830004L10Rik lincRNA lincRNA MGP_CBAJ_T0098249.1 MGP_CBAJ_G0036521.1 mouse_genomes_project 1 182708707 182713399 - Gm38190 sense_intronic sense_intronic MGP_CBAJ_T0002883.1 MGP_CBAJ_G0002709.1 mouse_genomes_project 1 189880080 189881231 + Gm37787 antisense antisense MGP_CBAJ_T0002782.1 MGP_CBAJ_G0002632.1 mouse_genomes_project 1 96206594 96212036 - 4930453O03Rik antisense antisense MGP_CBAJ_T0023399.1 MGP_CBAJ_G0016572.1 mouse_genomes_project 1 194543798 194581773 - MGP_CBAJ_P0023399 Fh1 protein_coding protein_coding MGP_CBAJ_T0023400.1 MGP_CBAJ_G0016572.1 mouse_genomes_project 1 194544800 194547707 - Fh1 protein_coding retained_intron MGP_CBAJ_T0023401.1 MGP_CBAJ_G0016572.1 mouse_genomes_project 1 194544802 194550070 - Fh1 protein_coding retained_intron MGP_CBAJ_T0023402.1 MGP_CBAJ_G0016572.1 mouse_genomes_project 1 194544808 194553195 - MGP_CBAJ_P0023402 Fh1 protein_coding protein_coding MGP_CBAJ_T0023403.1 MGP_CBAJ_G0016572.1 mouse_genomes_project 1 194570912 194581711 - MGP_CBAJ_P0023403 Fh1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012013.1 MGP_CBAJ_G0010125.1 mouse_genomes_project 1 103057906 103060442 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005727.1 MGP_CBAJ_G0004796.1 mouse_genomes_project 1 90732373 91010078 - 4933436I20Rik lincRNA lincRNA MGP_CBAJ_T0005728.1 MGP_CBAJ_G0004796.1 mouse_genomes_project 1 90933881 91010104 - 4933436I20Rik lincRNA lincRNA MGP_CBAJ_T0022390.1 MGP_CBAJ_G0016341.1 mouse_genomes_project 1 169829345 169834466 + MGP_CBAJ_P0022390 Rgs16 protein_coding protein_coding MGP_CBAJ_T0011809.1 MGP_CBAJ_G0009921.1 mouse_genomes_project 1 28569212 28569486 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0023542.1 MGP_CBAJ_G0016602.1 mouse_genomes_project 1 199753518 199785923 - MGP_CBAJ_P0023542 Coq8a protein_coding unknown_likely_coding MGP_CBAJ_T0023543.1 MGP_CBAJ_G0016602.1 mouse_genomes_project 1 199753925 199785957 - MGP_CBAJ_P0023543 Coq8a protein_coding protein_coding MGP_CBAJ_T0023544.1 MGP_CBAJ_G0016602.1 mouse_genomes_project 1 199754057 199768584 - MGP_CBAJ_P0023544 Coq8a protein_coding protein_coding MGP_CBAJ_T0023545.1 MGP_CBAJ_G0016602.1 mouse_genomes_project 1 199754297 199786000 - MGP_CBAJ_P0023545 Coq8a protein_coding nonsense_mediated_decay MGP_CBAJ_T0023546.1 MGP_CBAJ_G0016602.1 mouse_genomes_project 1 199757014 199785980 - MGP_CBAJ_P0023546 Coq8a protein_coding protein_coding MGP_CBAJ_T0023547.1 MGP_CBAJ_G0016602.1 mouse_genomes_project 1 199757021 199772055 - MGP_CBAJ_P0023547 Coq8a protein_coding nonsense_mediated_decay MGP_CBAJ_T0023548.1 MGP_CBAJ_G0016602.1 mouse_genomes_project 1 199758108 199768872 - Coq8a protein_coding retained_intron MGP_CBAJ_T0023549.1 MGP_CBAJ_G0016602.1 mouse_genomes_project 1 199768956 199785980 - MGP_CBAJ_P0023549 Coq8a protein_coding protein_coding MGP_CBAJ_T0023550.1 MGP_CBAJ_G0016602.1 mouse_genomes_project 1 199769021 199783495 - MGP_CBAJ_P0023550 Coq8a protein_coding protein_coding MGP_CBAJ_T0023551.1 MGP_CBAJ_G0016602.1 mouse_genomes_project 1 199769058 199786094 - MGP_CBAJ_P0023551 Coq8a protein_coding protein_coding MGP_CBAJ_T0023552.1 MGP_CBAJ_G0016602.1 mouse_genomes_project 1 199769085 199772758 - MGP_CBAJ_P0023552 Coq8a protein_coding protein_coding MGP_CBAJ_T0023553.1 MGP_CBAJ_G0016602.1 mouse_genomes_project 1 199769091 199785991 - MGP_CBAJ_P0023553 Coq8a protein_coding nonsense_mediated_decay MGP_CBAJ_T0023554.1 MGP_CBAJ_G0016602.1 mouse_genomes_project 1 199769094 199783674 - MGP_CBAJ_P0023554 Coq8a protein_coding protein_coding MGP_CBAJ_T0023555.1 MGP_CBAJ_G0016602.1 mouse_genomes_project 1 199769145 199785991 - MGP_CBAJ_P0023555 Coq8a protein_coding nonsense_mediated_decay MGP_CBAJ_T0023556.1 MGP_CBAJ_G0016602.1 mouse_genomes_project 1 199769197 199789574 - MGP_CBAJ_P0023556 Coq8a protein_coding protein_coding MGP_CBAJ_T0023557.1 MGP_CBAJ_G0016602.1 mouse_genomes_project 1 199772130 199785921 - MGP_CBAJ_P0023557 Coq8a protein_coding protein_coding MGP_CBAJ_T0012119.1 MGP_CBAJ_G0010231.1 mouse_genomes_project 1 154265392 154265813 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002910.1 MGP_CBAJ_G0002733.1 mouse_genomes_project 1 207824475 207862182 - Gm38155 antisense antisense MGP_CBAJ_T0000726.1 MGP_CBAJ_G0000665.1 mouse_genomes_project 1 197721766 197723636 + TEC TEC MGP_CBAJ_T0005717.1 MGP_CBAJ_G0004789.1 mouse_genomes_project 1 85330399 85772653 - lincRNA lincRNA MGP_CBAJ_T0009378.1 MGP_CBAJ_G0007516.1 mouse_genomes_project 1 67964312 67964450 - Gm24513 miRNA miRNA MGP_CBAJ_T0020320.1 MGP_CBAJ_G0015912.1 mouse_genomes_project 1 81191870 81200225 - MGP_CBAJ_P0020320 Slc23a3 protein_coding protein_coding MGP_CBAJ_T0020321.1 MGP_CBAJ_G0015912.1 mouse_genomes_project 1 81198046 81199881 - Slc23a3 protein_coding retained_intron MGP_CBAJ_T0023376.1 MGP_CBAJ_G0016564.1 mouse_genomes_project 1 193071378 193072466 - MGP_CBAJ_P0023376 Olfr419 protein_coding protein_coding MGP_CBAJ_T0099746.1 MGP_CBAJ_G0038001.1 mouse_genomes_project 1 31695158 31695285 - Gm26145 snoRNA snoRNA MGP_CBAJ_T0101485.1 MGP_CBAJ_G0039517.1 mouse_genomes_project 1 145171190 145173147 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0020305.1 MGP_CBAJ_G0015905.1 mouse_genomes_project 1 80889808 80901174 + MGP_CBAJ_P0020305 Wnt10a protein_coding protein_coding MGP_CBAJ_T0009388.1 MGP_CBAJ_G0007526.1 mouse_genomes_project 1 82719166 82719250 + Mir6343 miRNA miRNA MGP_CBAJ_T0019558.1 MGP_CBAJ_G0015768.1 mouse_genomes_project 1 57965248 58076640 - MGP_CBAJ_P0019558 Pgap1 protein_coding protein_coding MGP_CBAJ_T0019559.1 MGP_CBAJ_G0015768.1 mouse_genomes_project 1 58040234 58076642 - Pgap1 protein_coding retained_intron MGP_CBAJ_T0019560.1 MGP_CBAJ_G0015768.1 mouse_genomes_project 1 58043503 58046750 - Pgap1 protein_coding retained_intron MGP_CBAJ_T0019561.1 MGP_CBAJ_G0015768.1 mouse_genomes_project 1 58073560 58076585 - Pgap1 protein_coding retained_intron MGP_CBAJ_T0011870.1 MGP_CBAJ_G0009982.1 mouse_genomes_project 1 48054238 48055419 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0019997.1 MGP_CBAJ_G0015849.1 mouse_genomes_project 1 70027085 70044188 - MGP_CBAJ_P0019997 D630023F18Rik protein_coding protein_coding MGP_CBAJ_T0019998.1 MGP_CBAJ_G0015849.1 mouse_genomes_project 1 70029106 70044167 - MGP_CBAJ_P0019998 D630023F18Rik protein_coding protein_coding MGP_CBAJ_T0019999.1 MGP_CBAJ_G0015849.1 mouse_genomes_project 1 70030506 70044087 - MGP_CBAJ_P0019999 D630023F18Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0019039.1 MGP_CBAJ_G0015667.1 mouse_genomes_project 1 37545435 37582557 + MGP_CBAJ_P0019039 Cnnm4 protein_coding protein_coding MGP_CBAJ_T0019040.1 MGP_CBAJ_G0015667.1 mouse_genomes_project 1 37545811 37547183 + Cnnm4 protein_coding retained_intron MGP_CBAJ_T0022571.1 MGP_CBAJ_G0016374.1 mouse_genomes_project 1 174067601 174143754 + MGP_CBAJ_P0022571 Sec16b protein_coding protein_coding MGP_CBAJ_T0022572.1 MGP_CBAJ_G0016374.1 mouse_genomes_project 1 174067683 174143757 + MGP_CBAJ_P0022572 Sec16b protein_coding protein_coding MGP_CBAJ_T0022573.1 MGP_CBAJ_G0016374.1 mouse_genomes_project 1 174089541 174143754 + MGP_CBAJ_P0022573 Sec16b protein_coding protein_coding MGP_CBAJ_T0022574.1 MGP_CBAJ_G0016374.1 mouse_genomes_project 1 174100280 174133945 + MGP_CBAJ_P0022574 Sec16b protein_coding protein_coding MGP_CBAJ_T0022575.1 MGP_CBAJ_G0016374.1 mouse_genomes_project 1 174105197 174113050 + Sec16b protein_coding retained_intron MGP_CBAJ_T0019103.1 MGP_CBAJ_G0015678.1 mouse_genomes_project 1 38412143 38444913 + MGP_CBAJ_P0019103 Cnga3 protein_coding protein_coding MGP_CBAJ_T0019104.1 MGP_CBAJ_G0015678.1 mouse_genomes_project 1 38416089 38471154 + MGP_CBAJ_P0019104 Cnga3 protein_coding protein_coding MGP_CBAJ_T0019105.1 MGP_CBAJ_G0015678.1 mouse_genomes_project 1 38416089 38471154 + MGP_CBAJ_P0019105 Cnga3 protein_coding protein_coding MGP_CBAJ_T0019106.1 MGP_CBAJ_G0015678.1 mouse_genomes_project 1 38416914 38472354 + MGP_CBAJ_P0019106 Cnga3 protein_coding protein_coding MGP_CBAJ_T0000670.1 MGP_CBAJ_G0000610.1 mouse_genomes_project 1 175230257 175233344 - TEC TEC MGP_CBAJ_T0012104.1 MGP_CBAJ_G0010216.1 mouse_genomes_project 1 147602921 147603859 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0020353.1 MGP_CBAJ_G0015917.1 mouse_genomes_project 1 81251817 81262878 - MGP_CBAJ_P0020353 Atg9a protein_coding protein_coding MGP_CBAJ_T0020354.1 MGP_CBAJ_G0015917.1 mouse_genomes_project 1 81251822 81263148 - MGP_CBAJ_P0020354 Atg9a protein_coding protein_coding MGP_CBAJ_T0020355.1 MGP_CBAJ_G0015917.1 mouse_genomes_project 1 81251822 81262875 - MGP_CBAJ_P0020355 Atg9a protein_coding nonsense_mediated_decay MGP_CBAJ_T0020356.1 MGP_CBAJ_G0015917.1 mouse_genomes_project 1 81251822 81261334 - MGP_CBAJ_P0020356 Atg9a protein_coding protein_coding MGP_CBAJ_T0020357.1 MGP_CBAJ_G0015917.1 mouse_genomes_project 1 81251823 81262875 - MGP_CBAJ_P0020357 Atg9a protein_coding protein_coding MGP_CBAJ_T0020358.1 MGP_CBAJ_G0015917.1 mouse_genomes_project 1 81253946 81257004 - MGP_CBAJ_P0020358 Atg9a protein_coding protein_coding MGP_CBAJ_T0020359.1 MGP_CBAJ_G0015917.1 mouse_genomes_project 1 81258508 81262677 - Atg9a protein_coding retained_intron MGP_CBAJ_T0020360.1 MGP_CBAJ_G0015917.1 mouse_genomes_project 1 81260720 81262914 - Atg9a protein_coding retained_intron MGP_CBAJ_T0020361.1 MGP_CBAJ_G0015917.1 mouse_genomes_project 1 81261068 81262666 - MGP_CBAJ_P0020361 Atg9a protein_coding protein_coding MGP_CBAJ_T0002893.1 MGP_CBAJ_G0002718.1 mouse_genomes_project 1 197690121 197697539 - B230369F24Rik antisense antisense MGP_CBAJ_T0020874.1 MGP_CBAJ_G0016012.1 mouse_genomes_project 1 95442960 95468459 + Sag protein_coding retained_intron MGP_CBAJ_T0020875.1 MGP_CBAJ_G0016012.1 mouse_genomes_project 1 95442960 95484462 + Sag protein_coding retained_intron MGP_CBAJ_T0020876.1 MGP_CBAJ_G0016012.1 mouse_genomes_project 1 95442960 95484948 + Sag protein_coding retained_intron MGP_CBAJ_T0020877.1 MGP_CBAJ_G0016012.1 mouse_genomes_project 1 95442960 95461604 + Sag protein_coding retained_intron MGP_CBAJ_T0020878.1 MGP_CBAJ_G0016012.1 mouse_genomes_project 1 95442960 95505258 + MGP_CBAJ_P0020878 Sag protein_coding protein_coding MGP_CBAJ_T0020879.1 MGP_CBAJ_G0016012.1 mouse_genomes_project 1 95442960 95505393 + MGP_CBAJ_P0020879 Sag protein_coding protein_coding MGP_CBAJ_T0020880.1 MGP_CBAJ_G0016012.1 mouse_genomes_project 1 95455904 95467638 + Sag protein_coding processed_transcript MGP_CBAJ_T0020881.1 MGP_CBAJ_G0016012.1 mouse_genomes_project 1 95464447 95467648 + Sag protein_coding processed_transcript MGP_CBAJ_T0020882.1 MGP_CBAJ_G0016012.1 mouse_genomes_project 1 95469646 95484966 + Sag protein_coding retained_intron MGP_CBAJ_T0022169.1 MGP_CBAJ_G0016301.1 mouse_genomes_project 1 154539572 154958048 + MGP_CBAJ_P0022169 Kcnt2 protein_coding protein_coding MGP_CBAJ_T0022170.1 MGP_CBAJ_G0016301.1 mouse_genomes_project 1 154539609 154953844 + MGP_CBAJ_P0022170 Kcnt2 protein_coding protein_coding MGP_CBAJ_T0022171.1 MGP_CBAJ_G0016301.1 mouse_genomes_project 1 154539621 154954141 + MGP_CBAJ_P0022171 Kcnt2 protein_coding protein_coding MGP_CBAJ_T0022172.1 MGP_CBAJ_G0016301.1 mouse_genomes_project 1 154770959 154771967 + Kcnt2 protein_coding retained_intron MGP_CBAJ_T0022173.1 MGP_CBAJ_G0016301.1 mouse_genomes_project 1 154771124 154856885 + Kcnt2 protein_coding processed_transcript MGP_CBAJ_T0022174.1 MGP_CBAJ_G0016301.1 mouse_genomes_project 1 154850319 154911142 + MGP_CBAJ_P0022174 Kcnt2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012157.1 MGP_CBAJ_G0010269.1 mouse_genomes_project 1 172177577 172177883 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0023966.1 MGP_CBAJ_G0016689.1 mouse_genomes_project 1 213555024 213841676 - MGP_CBAJ_P0023966 Hhat protein_coding protein_coding MGP_CBAJ_T0023967.1 MGP_CBAJ_G0016689.1 mouse_genomes_project 1 213571145 213841686 - MGP_CBAJ_P0023967 Hhat protein_coding protein_coding MGP_CBAJ_T0023968.1 MGP_CBAJ_G0016689.1 mouse_genomes_project 1 213601813 213841681 - MGP_CBAJ_P0023968 Hhat protein_coding non_stop_decay MGP_CBAJ_T0023969.1 MGP_CBAJ_G0016689.1 mouse_genomes_project 1 213679576 213794273 - Hhat protein_coding processed_transcript MGP_CBAJ_T0023970.1 MGP_CBAJ_G0016689.1 mouse_genomes_project 1 213707677 213749779 - Hhat protein_coding processed_transcript MGP_CBAJ_T0023971.1 MGP_CBAJ_G0016689.1 mouse_genomes_project 1 213794261 213805466 - Hhat protein_coding processed_transcript MGP_CBAJ_T0023972.1 MGP_CBAJ_G0016689.1 mouse_genomes_project 1 213804596 213841455 - Hhat protein_coding processed_transcript MGP_CBAJ_T0019199.1 MGP_CBAJ_G0015695.1 mouse_genomes_project 1 40234203 40290424 - MGP_CBAJ_P0019199 Chst10 protein_coding protein_coding MGP_CBAJ_T0019200.1 MGP_CBAJ_G0015695.1 mouse_genomes_project 1 40234203 40290345 - MGP_CBAJ_P0019200 Chst10 protein_coding protein_coding MGP_CBAJ_T0019201.1 MGP_CBAJ_G0015695.1 mouse_genomes_project 1 40234211 40243070 - MGP_CBAJ_P0019201 Chst10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019202.1 MGP_CBAJ_G0015695.1 mouse_genomes_project 1 40234213 40290496 - MGP_CBAJ_P0019202 Chst10 protein_coding protein_coding MGP_CBAJ_T0019203.1 MGP_CBAJ_G0015695.1 mouse_genomes_project 1 40241452 40290488 - MGP_CBAJ_P0019203 Chst10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019204.1 MGP_CBAJ_G0015695.1 mouse_genomes_project 1 40245258 40290469 - MGP_CBAJ_P0019204 Chst10 protein_coding protein_coding MGP_CBAJ_T0019205.1 MGP_CBAJ_G0015695.1 mouse_genomes_project 1 40282968 40290321 - Chst10 protein_coding retained_intron MGP_CBAJ_T0019206.1 MGP_CBAJ_G0015695.1 mouse_genomes_project 1 40282969 40290345 - Chst10 protein_coding retained_intron MGP_CBAJ_T0019387.1 MGP_CBAJ_G0015736.1 mouse_genomes_project 1 47569691 47734104 - MGP_CBAJ_P0019387 Col5a2 protein_coding protein_coding MGP_CBAJ_T0019388.1 MGP_CBAJ_G0015736.1 mouse_genomes_project 1 47571454 47733736 - MGP_CBAJ_P0019388 Col5a2 protein_coding unknown_likely_coding MGP_CBAJ_T0019389.1 MGP_CBAJ_G0015736.1 mouse_genomes_project 1 47590381 47599683 - Col5a2 protein_coding retained_intron MGP_CBAJ_T0019390.1 MGP_CBAJ_G0015736.1 mouse_genomes_project 1 47624039 47734104 - Col5a2 protein_coding retained_intron MGP_CBAJ_T0019391.1 MGP_CBAJ_G0015736.1 mouse_genomes_project 1 47627348 47632279 - Col5a2 protein_coding retained_intron MGP_CBAJ_T0002922.1 MGP_CBAJ_G0002743.1 mouse_genomes_project 1 212840324 212841947 - Gm38037 antisense antisense MGP_CBAJ_T0011760.1 MGP_CBAJ_G0009872.1 mouse_genomes_project 1 8741013 8741768 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098529.1 MGP_CBAJ_G0036784.1 mouse_genomes_project 1 57354216 57354330 - Gm24251 snRNA snRNA MGP_CBAJ_T0021612.1 MGP_CBAJ_G0016178.1 mouse_genomes_project 1 143834063 143892151 - MGP_CBAJ_P0021612 Gm29427 protein_coding nonsense_mediated_decay MGP_CBAJ_T0009418.1 MGP_CBAJ_G0007556.1 mouse_genomes_project 1 152026284 152026371 + Mir181a-1 miRNA miRNA MGP_CBAJ_T0005761.1 MGP_CBAJ_G0004827.1 mouse_genomes_project 1 104518045 104539310 - 4930598F16Rik lincRNA lincRNA MGP_CBAJ_T0023366.1 MGP_CBAJ_G0016556.1 mouse_genomes_project 1 192853916 192854855 + MGP_CBAJ_P0023366 Olfr432 protein_coding protein_coding MGP_CBAJ_T0022247.1 MGP_CBAJ_G0016317.1 mouse_genomes_project 1 166085429 166142435 + MGP_CBAJ_P0022247 Tpr protein_coding protein_coding MGP_CBAJ_T0022248.1 MGP_CBAJ_G0016317.1 mouse_genomes_project 1 166085841 166142555 + MGP_CBAJ_P0022248 Tpr protein_coding protein_coding MGP_CBAJ_T0022249.1 MGP_CBAJ_G0016317.1 mouse_genomes_project 1 166085975 166088093 + Tpr protein_coding retained_intron MGP_CBAJ_T0022250.1 MGP_CBAJ_G0016317.1 mouse_genomes_project 1 166104579 166106550 + Tpr protein_coding retained_intron MGP_CBAJ_T0022251.1 MGP_CBAJ_G0016317.1 mouse_genomes_project 1 166107375 166108991 + Tpr protein_coding retained_intron MGP_CBAJ_T0022252.1 MGP_CBAJ_G0016317.1 mouse_genomes_project 1 166117341 166120945 + Tpr protein_coding retained_intron MGP_CBAJ_T0022253.1 MGP_CBAJ_G0016317.1 mouse_genomes_project 1 166121955 166132924 + MGP_CBAJ_P0022253 Tpr protein_coding protein_coding MGP_CBAJ_T0022254.1 MGP_CBAJ_G0016317.1 mouse_genomes_project 1 166123084 166132921 + Tpr protein_coding retained_intron MGP_CBAJ_T0022255.1 MGP_CBAJ_G0016317.1 mouse_genomes_project 1 166130111 166135835 + Tpr protein_coding retained_intron MGP_CBAJ_T0022256.1 MGP_CBAJ_G0016317.1 mouse_genomes_project 1 166131540 166142547 + Tpr protein_coding retained_intron MGP_CBAJ_T0022257.1 MGP_CBAJ_G0016317.1 mouse_genomes_project 1 166132805 166142547 + Tpr protein_coding retained_intron MGP_CBAJ_T0022258.1 MGP_CBAJ_G0016317.1 mouse_genomes_project 1 166138537 166142547 + MGP_CBAJ_P0022258 Tpr protein_coding protein_coding MGP_CBAJ_T0022259.1 MGP_CBAJ_G0016317.1 mouse_genomes_project 1 166140074 166142549 + Tpr protein_coding retained_intron MGP_CBAJ_T0022260.1 MGP_CBAJ_G0016317.1 mouse_genomes_project 1 166141490 166142411 + Tpr protein_coding processed_transcript MGP_CBAJ_T0022414.1 MGP_CBAJ_G0016348.1 mouse_genomes_project 1 170384921 170389440 + MGP_CBAJ_P0022414 Zfp648 protein_coding protein_coding MGP_CBAJ_T0005567.1 MGP_CBAJ_G0004679.1 mouse_genomes_project 1 15139487 15144223 + D030040B21Rik lincRNA lincRNA MGP_CBAJ_T0098571.1 MGP_CBAJ_G0036826.1 mouse_genomes_project 1 151206251 151206355 - Gm25609 snRNA snRNA MGP_CBAJ_T0000350.1 MGP_CBAJ_G0000295.1 mouse_genomes_project 1 11429746 11431614 - TEC TEC MGP_CBAJ_T0101452.1 MGP_CBAJ_G0039484.1 mouse_genomes_project 1 70363638 70364318 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0023783.1 MGP_CBAJ_G0016653.1 mouse_genomes_project 1 206420030 206445072 - MGP_CBAJ_P0023783 Lyplal1 protein_coding protein_coding MGP_CBAJ_T0023784.1 MGP_CBAJ_G0016653.1 mouse_genomes_project 1 206420832 206445050 - Lyplal1 protein_coding processed_transcript MGP_CBAJ_T0020915.1 MGP_CBAJ_G0016024.1 mouse_genomes_project 1 95981956 95995691 + MGP_CBAJ_P0020915 Ugt1a1 protein_coding protein_coding MGP_CBAJ_T0021747.1 MGP_CBAJ_G0016210.1 mouse_genomes_project 1 145623423 145632147 + MGP_CBAJ_P0021747 Klhdc8a protein_coding protein_coding MGP_CBAJ_T0000611.1 MGP_CBAJ_G0000552.1 mouse_genomes_project 1 151311464 151311873 - TEC TEC MGP_CBAJ_T0020406.1 MGP_CBAJ_G0015922.1 mouse_genomes_project 1 81293692 81297264 - MGP_CBAJ_P0020406 A630095N17Rik protein_coding protein_coding MGP_CBAJ_T0020407.1 MGP_CBAJ_G0015922.1 mouse_genomes_project 1 81293853 81305645 - MGP_CBAJ_P0020407 A630095N17Rik protein_coding protein_coding MGP_CBAJ_T0020408.1 MGP_CBAJ_G0015922.1 mouse_genomes_project 1 81304417 81305657 - MGP_CBAJ_P0020408 A630095N17Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0020905.1 MGP_CBAJ_G0016018.1 mouse_genomes_project 1 95808825 95992941 + MGP_CBAJ_P0020905 protein_coding protein_coding MGP_CBAJ_T0020906.1 MGP_CBAJ_G0016018.1 mouse_genomes_project 1 95808827 95996187 + MGP_CBAJ_P0020906 protein_coding protein_coding MGP_CBAJ_T0020907.1 MGP_CBAJ_G0016018.1 mouse_genomes_project 1 95808877 95995148 + MGP_CBAJ_P0020907 protein_coding nonsense_mediated_decay MGP_CBAJ_T0020914.1 MGP_CBAJ_G0016023.1 mouse_genomes_project 1 95975574 95976625 - MGP_CBAJ_P0020914 Dnajb3 protein_coding protein_coding MGP_CBAJ_T0000666.1 MGP_CBAJ_G0000606.1 mouse_genomes_project 1 173948155 173950551 - TEC TEC MGP_CBAJ_T0099750.1 MGP_CBAJ_G0038005.1 mouse_genomes_project 1 41044630 41044740 - Snord89 snoRNA snoRNA MGP_CBAJ_T0012149.1 MGP_CBAJ_G0010261.1 mouse_genomes_project 1 168926510 168927213 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009448.1 MGP_CBAJ_G0007586.1 mouse_genomes_project 1 216054798 216054862 + Mir3962 miRNA miRNA MGP_CBAJ_T0009368.1 MGP_CBAJ_G0007506.1 mouse_genomes_project 1 47507539 47507680 + miRNA miRNA MGP_CBAJ_T0011779.1 MGP_CBAJ_G0009891.1 mouse_genomes_project 1 16895894 16896879 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002848.1 MGP_CBAJ_G0002681.1 mouse_genomes_project 1 169832544 169838322 - Gm28513 antisense antisense MGP_CBAJ_T0011746.1 MGP_CBAJ_G0009858.1 mouse_genomes_project 1 6079310 6079710 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000589.1 MGP_CBAJ_G0000531.1 mouse_genomes_project 1 143620558 143622818 + TEC TEC MGP_CBAJ_T0005805.1 MGP_CBAJ_G0004860.1 mouse_genomes_project 1 133357005 133360765 - 2210011K15Rik lincRNA lincRNA MGP_CBAJ_T0016757.1 MGP_CBAJ_G0014845.1 mouse_genomes_project 1 97683618 97718569 - 4933400F21Rik processed_transcript antisense MGP_CBAJ_T0016758.1 MGP_CBAJ_G0014845.1 mouse_genomes_project 1 97710635 97718555 - 4933400F21Rik processed_transcript antisense MGP_CBAJ_T0016759.1 MGP_CBAJ_G0014845.1 mouse_genomes_project 1 97714233 97718549 - 4933400F21Rik processed_transcript retained_intron MGP_CBAJ_T0000319.1 MGP_CBAJ_G0000264.1 mouse_genomes_project 1 142871 143941 + TEC TEC MGP_CBAJ_T0019419.1 MGP_CBAJ_G0015743.1 mouse_genomes_project 1 53902769 53916565 + Tmeff2 protein_coding processed_transcript MGP_CBAJ_T0019420.1 MGP_CBAJ_G0015743.1 mouse_genomes_project 1 53902769 53918064 + Tmeff2 protein_coding processed_transcript MGP_CBAJ_T0019421.1 MGP_CBAJ_G0015743.1 mouse_genomes_project 1 53912614 53989566 + MGP_CBAJ_P0019421 Tmeff2 protein_coding protein_coding MGP_CBAJ_T0019422.1 MGP_CBAJ_G0015743.1 mouse_genomes_project 1 53931657 54228710 + MGP_CBAJ_P0019422 Tmeff2 protein_coding protein_coding MGP_CBAJ_T0000560.1 MGP_CBAJ_G0000502.1 mouse_genomes_project 1 133755939 133756688 + TEC TEC MGP_CBAJ_T0020500.1 MGP_CBAJ_G0015934.1 mouse_genomes_project 1 81623577 81626867 + MGP_CBAJ_P0020500 Inha protein_coding protein_coding MGP_CBAJ_T0018803.1 MGP_CBAJ_G0015622.1 mouse_genomes_project 1 20368516 20375231 + MGP_CBAJ_P0018803 protein_coding protein_coding MGP_CBAJ_T0099733.1 MGP_CBAJ_G0037988.1 mouse_genomes_project 1 9011631 9011759 - Gm24173 snoRNA snoRNA MGP_CBAJ_T0012186.1 MGP_CBAJ_G0010298.1 mouse_genomes_project 1 184980241 184980608 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016792.1 MGP_CBAJ_G0014856.1 mouse_genomes_project 1 165730090 165764881 - Ptgs2os processed_transcript antisense MGP_CBAJ_T0016793.1 MGP_CBAJ_G0014856.1 mouse_genomes_project 1 165763244 165765027 - Ptgs2os processed_transcript retained_intron MGP_CBAJ_T0005792.1 MGP_CBAJ_G0004851.1 mouse_genomes_project 1 131757142 131763704 + lincRNA lincRNA MGP_CBAJ_T0005817.1 MGP_CBAJ_G0004872.1 mouse_genomes_project 1 147123597 147127594 + Gm26706 lincRNA lincRNA MGP_CBAJ_T0021842.1 MGP_CBAJ_G0016231.1 mouse_genomes_project 1 147135466 147179012 - MGP_CBAJ_P0021842 protein_coding protein_coding MGP_CBAJ_T0020789.1 MGP_CBAJ_G0015998.1 mouse_genomes_project 1 94672951 94675127 + Akp3 protein_coding retained_intron MGP_CBAJ_T0020790.1 MGP_CBAJ_G0015998.1 mouse_genomes_project 1 94672986 94675891 + MGP_CBAJ_P0020790 Akp3 protein_coding protein_coding MGP_CBAJ_T0005910.1 MGP_CBAJ_G0004947.1 mouse_genomes_project 1 196584345 196593264 + Gm37306 lincRNA lincRNA MGP_CBAJ_T0098579.1 MGP_CBAJ_G0036834.1 mouse_genomes_project 1 180687646 180687754 + Gm24940 snRNA snRNA MGP_CBAJ_T0097885.1 MGP_CBAJ_G0036158.1 mouse_genomes_project 1 201719669 201719785 - Gm26004 rRNA rRNA MGP_CBAJ_T0016790.1 MGP_CBAJ_G0014855.1 mouse_genomes_project 1 161951766 161958820 - processed_transcript antisense MGP_CBAJ_T0016791.1 MGP_CBAJ_G0014855.1 mouse_genomes_project 1 161957632 161960364 - processed_transcript TEC MGP_CBAJ_T0022220.1 MGP_CBAJ_G0016311.1 mouse_genomes_project 1 159636551 159663979 - MGP_CBAJ_P0022220 Rgs18 protein_coding protein_coding MGP_CBAJ_T0002901.1 MGP_CBAJ_G0002725.1 mouse_genomes_project 1 202459105 202469694 + Gm37885 antisense antisense MGP_CBAJ_T0002902.1 MGP_CBAJ_G0002725.1 mouse_genomes_project 1 202467254 202468821 + Gm37885 antisense antisense MGP_CBAJ_T0000595.1 MGP_CBAJ_G0000537.1 mouse_genomes_project 1 145200397 145200904 - TEC TEC MGP_CBAJ_T0005744.1 MGP_CBAJ_G0004811.1 mouse_genomes_project 1 98336971 98341816 - Gm28721 lincRNA lincRNA MGP_CBAJ_T0022929.1 MGP_CBAJ_G0016441.1 mouse_genomes_project 1 183679882 183714612 - MGP_CBAJ_P0022929 Dusp27 protein_coding protein_coding MGP_CBAJ_T0022930.1 MGP_CBAJ_G0016441.1 mouse_genomes_project 1 183679887 183714586 - MGP_CBAJ_P0022930 Dusp27 protein_coding protein_coding MGP_CBAJ_T0101466.1 MGP_CBAJ_G0039498.1 mouse_genomes_project 1 95962731 95963514 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0098527.1 MGP_CBAJ_G0036782.1 mouse_genomes_project 1 51134719 51134840 - Gm23240 snRNA snRNA MGP_CBAJ_T0002721.1 MGP_CBAJ_G0002586.1 mouse_genomes_project 1 40277230 40280412 + Gm37707 antisense antisense MGP_CBAJ_T0023115.1 MGP_CBAJ_G0016489.1 mouse_genomes_project 1 189434596 189444917 + MGP_CBAJ_P0023115 Adamts4 protein_coding protein_coding MGP_CBAJ_T0023116.1 MGP_CBAJ_G0016489.1 mouse_genomes_project 1 189436282 189444917 + MGP_CBAJ_P0023116 Adamts4 protein_coding protein_coding MGP_CBAJ_T0011131.1 MGP_CBAJ_G0009269.1 mouse_genomes_project 1 155690661 155690775 + Gm22016 misc_RNA misc_RNA MGP_CBAJ_T0099813.1 MGP_CBAJ_G0038068.1 mouse_genomes_project 1 178016426 178016492 + Snord78 snoRNA snoRNA MGP_CBAJ_T0011866.1 MGP_CBAJ_G0009978.1 mouse_genomes_project 1 47356197 47357135 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005752.1 MGP_CBAJ_G0004819.1 mouse_genomes_project 1 99819543 99831754 + Gm28380 lincRNA lincRNA MGP_CBAJ_T0019138.1 MGP_CBAJ_G0015684.1 mouse_genomes_project 1 39023134 39152694 - MGP_CBAJ_P0019138 Tsga10 protein_coding protein_coding MGP_CBAJ_T0019139.1 MGP_CBAJ_G0015684.1 mouse_genomes_project 1 39032369 39154044 - MGP_CBAJ_P0019139 Tsga10 protein_coding protein_coding MGP_CBAJ_T0019140.1 MGP_CBAJ_G0015684.1 mouse_genomes_project 1 39032369 39142988 - MGP_CBAJ_P0019140 Tsga10 protein_coding protein_coding MGP_CBAJ_T0019141.1 MGP_CBAJ_G0015684.1 mouse_genomes_project 1 39073667 39142961 - MGP_CBAJ_P0019141 Tsga10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0019142.1 MGP_CBAJ_G0015684.1 mouse_genomes_project 1 39114867 39152451 - MGP_CBAJ_P0019142 Tsga10 protein_coding protein_coding MGP_CBAJ_T0019143.1 MGP_CBAJ_G0015684.1 mouse_genomes_project 1 39115899 39152688 - MGP_CBAJ_P0019143 Tsga10 protein_coding protein_coding MGP_CBAJ_T0019144.1 MGP_CBAJ_G0015684.1 mouse_genomes_project 1 39116735 39152688 - MGP_CBAJ_P0019144 Tsga10 protein_coding protein_coding MGP_CBAJ_T0019145.1 MGP_CBAJ_G0015684.1 mouse_genomes_project 1 39125454 39131334 - Tsga10 protein_coding retained_intron MGP_CBAJ_T0099770.1 MGP_CBAJ_G0038025.1 mouse_genomes_project 1 72443978 72444107 + Gm26342 snoRNA snoRNA MGP_CBAJ_T0000651.1 MGP_CBAJ_G0000591.1 mouse_genomes_project 1 169498793 169499613 + TEC TEC MGP_CBAJ_T0011990.1 MGP_CBAJ_G0010102.1 mouse_genomes_project 1 90234937 90235778 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098237.1 MGP_CBAJ_G0036509.1 mouse_genomes_project 1 100056337 100057808 + Gm29101 sense_intronic sense_intronic MGP_CBAJ_T0000485.1 MGP_CBAJ_G0000427.1 mouse_genomes_project 1 80559105 80561990 - TEC TEC MGP_CBAJ_T0023332.1 MGP_CBAJ_G0016539.1 mouse_genomes_project 1 191662312 191663254 + MGP_CBAJ_P0023332 Olfr218 protein_coding protein_coding MGP_CBAJ_T0005645.1 MGP_CBAJ_G0004736.1 mouse_genomes_project 1 55714539 55724817 - Gm28178 lincRNA lincRNA MGP_CBAJ_T0098522.1 MGP_CBAJ_G0036777.1 mouse_genomes_project 1 33999255 33999355 + Gm25792 snRNA snRNA MGP_CBAJ_T0101470.1 MGP_CBAJ_G0039502.1 mouse_genomes_project 1 102441063 102452075 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0011999.1 MGP_CBAJ_G0010111.1 mouse_genomes_project 1 95705943 95707525 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011789.1 MGP_CBAJ_G0009901.1 mouse_genomes_project 1 20414931 20415147 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0018949.1 MGP_CBAJ_G0015650.1 mouse_genomes_project 1 35269221 35275900 - MGP_CBAJ_P0018949 Ccdc115 protein_coding protein_coding MGP_CBAJ_T0018950.1 MGP_CBAJ_G0015650.1 mouse_genomes_project 1 35269229 35274946 - Ccdc115 protein_coding retained_intron MGP_CBAJ_T0099767.1 MGP_CBAJ_G0038022.1 mouse_genomes_project 1 67857250 67858280 + Snora41 snoRNA snoRNA MGP_CBAJ_T0022459.1 MGP_CBAJ_G0016356.1 mouse_genomes_project 1 171997719 172048588 - MGP_CBAJ_P0022459 Lhx4 protein_coding protein_coding MGP_CBAJ_T0022460.1 MGP_CBAJ_G0016356.1 mouse_genomes_project 1 172007596 172058300 - MGP_CBAJ_P0022460 Lhx4 protein_coding protein_coding MGP_CBAJ_T0002694.1 MGP_CBAJ_G0002565.1 mouse_genomes_project 1 16187289 16223498 - Gm28154 antisense antisense MGP_CBAJ_T0011722.1 MGP_CBAJ_G0009834.1 mouse_genomes_project 1 1920994 1922442 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000755.1 MGP_CBAJ_G0000693.1 mouse_genomes_project 1 209738746 209740285 + TEC TEC MGP_CBAJ_T0012147.1 MGP_CBAJ_G0010259.1 mouse_genomes_project 1 168028987 168029792 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000440.1 MGP_CBAJ_G0000382.1 mouse_genomes_project 1 58482547 58485297 - TEC TEC MGP_CBAJ_T0023908.1 MGP_CBAJ_G0016678.1 mouse_genomes_project 1 212267876 212292840 + MGP_CBAJ_P0023908 Tmem206 protein_coding protein_coding MGP_CBAJ_T0012063.1 MGP_CBAJ_G0010175.1 mouse_genomes_project 1 126421233 126421807 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005692.1 MGP_CBAJ_G0004771.1 mouse_genomes_project 1 77742095 77798358 - 4930556G22Rik lincRNA lincRNA MGP_CBAJ_T0012201.1 MGP_CBAJ_G0010313.1 mouse_genomes_project 1 196929269 196929861 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0021096.1 MGP_CBAJ_G0016068.1 mouse_genomes_project 1 101279575 101281030 + MGP_CBAJ_P0021096 Dusp28 protein_coding protein_coding MGP_CBAJ_T0099820.1 MGP_CBAJ_G0038075.1 mouse_genomes_project 1 180375850 180375972 + Gm22434 snoRNA snoRNA MGP_CBAJ_T0000633.1 MGP_CBAJ_G0000573.1 mouse_genomes_project 1 155991726 155992998 + TEC TEC MGP_CBAJ_T0101451.1 MGP_CBAJ_G0039483.1 mouse_genomes_project 1 70363364 70363636 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0012050.1 MGP_CBAJ_G0010162.1 mouse_genomes_project 1 120988461 120988999 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0022865.1 MGP_CBAJ_G0016432.1 mouse_genomes_project 1 182784807 182816127 + MGP_CBAJ_P0022865 Gpr161 protein_coding protein_coding MGP_CBAJ_T0022866.1 MGP_CBAJ_G0016432.1 mouse_genomes_project 1 182793799 182823985 + MGP_CBAJ_P0022866 Gpr161 protein_coding protein_coding MGP_CBAJ_T0023324.1 MGP_CBAJ_G0016534.1 mouse_genomes_project 1 191075956 191077822 + MGP_CBAJ_P0023324 Crp protein_coding protein_coding MGP_CBAJ_T0023325.1 MGP_CBAJ_G0016534.1 mouse_genomes_project 1 191075957 191230022 + Crp protein_coding processed_transcript MGP_CBAJ_T0005867.1 MGP_CBAJ_G0004912.1 mouse_genomes_project 1 175682745 175695509 - 1600012P17Rik lincRNA lincRNA MGP_CBAJ_T0005868.1 MGP_CBAJ_G0004912.1 mouse_genomes_project 1 175684652 175695117 - 1600012P17Rik lincRNA lincRNA MGP_CBAJ_T0005960.1 MGP_CBAJ_G0004982.1 mouse_genomes_project 1 208835917 208848888 + Gm38064 lincRNA lincRNA MGP_CBAJ_T0002855.1 MGP_CBAJ_G0002688.1 mouse_genomes_project 1 176768350 176771707 - Gm38039 antisense antisense MGP_CBAJ_T0012062.1 MGP_CBAJ_G0010174.1 mouse_genomes_project 1 124621257 124621993 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0020932.1 MGP_CBAJ_G0016031.1 mouse_genomes_project 1 97021194 97103213 + MGP_CBAJ_P0020932 Sh3bp4 protein_coding protein_coding MGP_CBAJ_T0020933.1 MGP_CBAJ_G0016031.1 mouse_genomes_project 1 97021232 97058270 + Sh3bp4 protein_coding processed_transcript MGP_CBAJ_T0018654.1 MGP_CBAJ_G0015584.1 mouse_genomes_project 1 10930823 11079003 - MGP_CBAJ_P0018654 Slco5a1 protein_coding protein_coding MGP_CBAJ_T0018655.1 MGP_CBAJ_G0015584.1 mouse_genomes_project 1 10941505 11079422 - MGP_CBAJ_P0018655 Slco5a1 protein_coding protein_coding MGP_CBAJ_T0018656.1 MGP_CBAJ_G0015584.1 mouse_genomes_project 1 10941505 11079422 - MGP_CBAJ_P0018656 Slco5a1 protein_coding protein_coding MGP_CBAJ_T0018657.1 MGP_CBAJ_G0015584.1 mouse_genomes_project 1 10943148 11000018 - Slco5a1 protein_coding processed_transcript MGP_CBAJ_T0018658.1 MGP_CBAJ_G0015584.1 mouse_genomes_project 1 11060985 11079685 - Slco5a1 protein_coding processed_transcript MGP_CBAJ_T0023856.1 MGP_CBAJ_G0016667.1 mouse_genomes_project 1 211561073 211792508 - MGP_CBAJ_P0023856 Rps6kc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023857.1 MGP_CBAJ_G0016667.1 mouse_genomes_project 1 211645308 211704882 - MGP_CBAJ_P0023857 Rps6kc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023858.1 MGP_CBAJ_G0016667.1 mouse_genomes_project 1 211645308 211792531 - MGP_CBAJ_P0023858 Rps6kc1 protein_coding protein_coding MGP_CBAJ_T0023859.1 MGP_CBAJ_G0016667.1 mouse_genomes_project 1 211645308 211792499 - MGP_CBAJ_P0023859 Rps6kc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0023860.1 MGP_CBAJ_G0016667.1 mouse_genomes_project 1 211667142 211719191 - Rps6kc1 protein_coding retained_intron MGP_CBAJ_T0023861.1 MGP_CBAJ_G0016667.1 mouse_genomes_project 1 211669521 211792495 - Rps6kc1 protein_coding retained_intron MGP_CBAJ_T0023862.1 MGP_CBAJ_G0016667.1 mouse_genomes_project 1 211679740 211681316 - Rps6kc1 protein_coding retained_intron MGP_CBAJ_T0023863.1 MGP_CBAJ_G0016667.1 mouse_genomes_project 1 211747523 211780083 - Rps6kc1 protein_coding processed_transcript MGP_CBAJ_T0023864.1 MGP_CBAJ_G0016667.1 mouse_genomes_project 1 211760971 211792530 - MGP_CBAJ_P0023864 Rps6kc1 protein_coding protein_coding MGP_CBAJ_T0099822.1 MGP_CBAJ_G0038077.1 mouse_genomes_project 1 183065305 183065432 - Gm23208 snoRNA snoRNA MGP_CBAJ_T0022009.1 MGP_CBAJ_G0016268.1 mouse_genomes_project 1 149535836 149567658 + MGP_CBAJ_P0022009 Csrp1 protein_coding protein_coding MGP_CBAJ_T0022010.1 MGP_CBAJ_G0016268.1 mouse_genomes_project 1 149544135 149567658 + MGP_CBAJ_P0022010 Csrp1 protein_coding protein_coding MGP_CBAJ_T0100999.1 MGP_CBAJ_G0039248.1 mouse_genomes_project 1 173285256 173287730 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101000.1 MGP_CBAJ_G0039248.1 mouse_genomes_project 1 173285557 173285868 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0023223.1 MGP_CBAJ_G0016512.1 mouse_genomes_project 1 190279169 190307874 - MGP_CBAJ_P0023223 Vangl2 protein_coding protein_coding MGP_CBAJ_T0023224.1 MGP_CBAJ_G0016512.1 mouse_genomes_project 1 190279169 190309026 - MGP_CBAJ_P0023224 Vangl2 protein_coding protein_coding MGP_CBAJ_T0023225.1 MGP_CBAJ_G0016512.1 mouse_genomes_project 1 190282436 190307874 - MGP_CBAJ_P0023225 Vangl2 protein_coding protein_coding MGP_CBAJ_T0023226.1 MGP_CBAJ_G0016512.1 mouse_genomes_project 1 190282778 190287033 - Vangl2 protein_coding processed_transcript MGP_CBAJ_T0023227.1 MGP_CBAJ_G0016512.1 mouse_genomes_project 1 190287849 190307288 - MGP_CBAJ_P0023227 Vangl2 protein_coding protein_coding MGP_CBAJ_T0023228.1 MGP_CBAJ_G0016512.1 mouse_genomes_project 1 190287932 190307847 - MGP_CBAJ_P0023228 Vangl2 protein_coding protein_coding MGP_CBAJ_T0005927.1 MGP_CBAJ_G0004959.1 mouse_genomes_project 1 202227802 202246720 + 1700047M11Rik lincRNA lincRNA MGP_CBAJ_T0005928.1 MGP_CBAJ_G0004959.1 mouse_genomes_project 1 202244228 202246682 + 1700047M11Rik lincRNA lincRNA MGP_CBAJ_T0009439.1 MGP_CBAJ_G0007577.1 mouse_genomes_project 1 197750122 197750243 - Gm27458 miRNA miRNA MGP_CBAJ_T0021188.1 MGP_CBAJ_G0016084.1 mouse_genomes_project 1 101953196 102079870 + MGP_CBAJ_P0021188 Farp2 protein_coding protein_coding MGP_CBAJ_T0021189.1 MGP_CBAJ_G0016084.1 mouse_genomes_project 1 101953229 102035660 + MGP_CBAJ_P0021189 Farp2 protein_coding protein_coding MGP_CBAJ_T0021471.1 MGP_CBAJ_G0016151.1 mouse_genomes_project 1 133302162 133329786 - MGP_CBAJ_P0021471 Insig2 protein_coding protein_coding MGP_CBAJ_T0021472.1 MGP_CBAJ_G0016151.1 mouse_genomes_project 1 133303714 133305138 - Insig2 protein_coding retained_intron MGP_CBAJ_T0021473.1 MGP_CBAJ_G0016151.1 mouse_genomes_project 1 133303745 133329800 - MGP_CBAJ_P0021473 Insig2 protein_coding protein_coding MGP_CBAJ_T0021474.1 MGP_CBAJ_G0016151.1 mouse_genomes_project 1 133304699 133312590 - Insig2 protein_coding retained_intron MGP_CBAJ_T0021475.1 MGP_CBAJ_G0016151.1 mouse_genomes_project 1 133304756 133329772 - MGP_CBAJ_P0021475 Insig2 protein_coding protein_coding MGP_CBAJ_T0021476.1 MGP_CBAJ_G0016151.1 mouse_genomes_project 1 133305056 133323391 - MGP_CBAJ_P0021476 Insig2 protein_coding protein_coding MGP_CBAJ_T0021477.1 MGP_CBAJ_G0016151.1 mouse_genomes_project 1 133312021 133319928 - Insig2 protein_coding retained_intron MGP_CBAJ_T0021478.1 MGP_CBAJ_G0016151.1 mouse_genomes_project 1 133319863 133329689 - MGP_CBAJ_P0021478 Insig2 protein_coding protein_coding MGP_CBAJ_T0021479.1 MGP_CBAJ_G0016151.1 mouse_genomes_project 1 133319933 133329695 - MGP_CBAJ_P0021479 Insig2 protein_coding protein_coding MGP_CBAJ_T0021480.1 MGP_CBAJ_G0016151.1 mouse_genomes_project 1 133319960 133334570 - MGP_CBAJ_P0021480 Insig2 protein_coding protein_coding MGP_CBAJ_T0098233.1 MGP_CBAJ_G0036506.1 mouse_genomes_project 1 80314992 80317295 + Gm29358 sense_intronic sense_intronic MGP_CBAJ_T0098234.1 MGP_CBAJ_G0036506.1 mouse_genomes_project 1 80315030 80318257 + Gm29358 sense_intronic sense_intronic MGP_CBAJ_T0012027.1 MGP_CBAJ_G0010139.1 mouse_genomes_project 1 110925333 110925782 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011127.1 MGP_CBAJ_G0009265.1 mouse_genomes_project 1 97719462 97719773 + Gm26037 misc_RNA misc_RNA MGP_CBAJ_T0020791.1 MGP_CBAJ_G0015999.1 mouse_genomes_project 1 94692670 94701534 - MGP_CBAJ_P0020791 Ecel1 protein_coding protein_coding MGP_CBAJ_T0020792.1 MGP_CBAJ_G0015999.1 mouse_genomes_project 1 94692673 94700040 - MGP_CBAJ_P0020792 Ecel1 protein_coding protein_coding MGP_CBAJ_T0020793.1 MGP_CBAJ_G0015999.1 mouse_genomes_project 1 94692677 94701178 - MGP_CBAJ_P0020793 Ecel1 protein_coding protein_coding MGP_CBAJ_T0020794.1 MGP_CBAJ_G0015999.1 mouse_genomes_project 1 94692897 94693932 - Ecel1 protein_coding retained_intron MGP_CBAJ_T0020795.1 MGP_CBAJ_G0015999.1 mouse_genomes_project 1 94700035 94700324 - Ecel1 protein_coding processed_transcript MGP_CBAJ_T0019589.1 MGP_CBAJ_G0015772.1 mouse_genomes_project 1 58663809 58680677 - MGP_CBAJ_P0019589 protein_coding unknown_likely_coding MGP_CBAJ_T0019590.1 MGP_CBAJ_G0015772.1 mouse_genomes_project 1 58663875 58680677 - MGP_CBAJ_P0019590 protein_coding unknown_likely_coding MGP_CBAJ_T0019591.1 MGP_CBAJ_G0015772.1 mouse_genomes_project 1 58676804 58682581 - MGP_CBAJ_P0019591 protein_coding protein_coding MGP_CBAJ_T0019592.1 MGP_CBAJ_G0015772.1 mouse_genomes_project 1 58678270 58682581 - MGP_CBAJ_P0019592 protein_coding protein_coding MGP_CBAJ_T0023104.1 MGP_CBAJ_G0016487.1 mouse_genomes_project 1 189411313 189415962 - MGP_CBAJ_P0023104 Fcer1g protein_coding protein_coding MGP_CBAJ_T0023105.1 MGP_CBAJ_G0016487.1 mouse_genomes_project 1 189411321 189415904 - MGP_CBAJ_P0023105 Fcer1g protein_coding protein_coding MGP_CBAJ_T0023106.1 MGP_CBAJ_G0016487.1 mouse_genomes_project 1 189412786 189415936 - Fcer1g protein_coding retained_intron MGP_CBAJ_T0023773.1 MGP_CBAJ_G0016651.1 mouse_genomes_project 1 205619692 205673428 + Eprs protein_coding retained_intron MGP_CBAJ_T0023774.1 MGP_CBAJ_G0016651.1 mouse_genomes_project 1 205619692 205691929 + MGP_CBAJ_P0023774 Eprs protein_coding protein_coding MGP_CBAJ_T0023775.1 MGP_CBAJ_G0016651.1 mouse_genomes_project 1 205619706 205623673 + Eprs protein_coding retained_intron MGP_CBAJ_T0023776.1 MGP_CBAJ_G0016651.1 mouse_genomes_project 1 205619780 205633588 + Eprs protein_coding retained_intron MGP_CBAJ_T0023777.1 MGP_CBAJ_G0016651.1 mouse_genomes_project 1 205619832 205638455 + MGP_CBAJ_P0023777 Eprs protein_coding nonsense_mediated_decay MGP_CBAJ_T0023778.1 MGP_CBAJ_G0016651.1 mouse_genomes_project 1 205622174 205630054 + Eprs protein_coding retained_intron MGP_CBAJ_T0023779.1 MGP_CBAJ_G0016651.1 mouse_genomes_project 1 205624292 205635507 + MGP_CBAJ_P0023779 Eprs protein_coding nonsense_mediated_decay MGP_CBAJ_T0023780.1 MGP_CBAJ_G0016651.1 mouse_genomes_project 1 205624299 205631074 + Eprs protein_coding retained_intron MGP_CBAJ_T0023781.1 MGP_CBAJ_G0016651.1 mouse_genomes_project 1 205662638 205666679 + Eprs protein_coding retained_intron MGP_CBAJ_T0012206.1 MGP_CBAJ_G0010318.1 mouse_genomes_project 1 200766263 200766910 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000341.1 MGP_CBAJ_G0000286.1 mouse_genomes_project 1 7998175 7999897 - TEC TEC MGP_CBAJ_T0000330.1 MGP_CBAJ_G0000275.1 mouse_genomes_project 1 2226788 2228903 - TEC TEC MGP_CBAJ_T0101453.1 MGP_CBAJ_G0039485.1 mouse_genomes_project 1 70364284 70364452 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0000750.1 MGP_CBAJ_G0000688.1 mouse_genomes_project 1 207526254 207528548 - TEC TEC MGP_CBAJ_T0005718.1 MGP_CBAJ_G0004790.1 mouse_genomes_project 1 85364401 85365796 + Gm29187 lincRNA lincRNA MGP_CBAJ_T0011853.1 MGP_CBAJ_G0009965.1 mouse_genomes_project 1 43977565 43978610 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011134.1 MGP_CBAJ_G0009272.1 mouse_genomes_project 1 195863008 195863273 + Gm25288 misc_RNA misc_RNA MGP_CBAJ_T0023843.1 MGP_CBAJ_G0016664.1 mouse_genomes_project 1 210491827 210657718 + MGP_CBAJ_P0023843 Ptpn14 protein_coding protein_coding MGP_CBAJ_T0023844.1 MGP_CBAJ_G0016664.1 mouse_genomes_project 1 210491834 210621602 + Ptpn14 protein_coding retained_intron MGP_CBAJ_T0023845.1 MGP_CBAJ_G0016664.1 mouse_genomes_project 1 210564979 210633000 + Ptpn14 protein_coding retained_intron MGP_CBAJ_T0023846.1 MGP_CBAJ_G0016664.1 mouse_genomes_project 1 210565015 210651096 + MGP_CBAJ_P0023846 Ptpn14 protein_coding protein_coding MGP_CBAJ_T0023847.1 MGP_CBAJ_G0016664.1 mouse_genomes_project 1 210626036 210633487 + Ptpn14 protein_coding retained_intron MGP_CBAJ_T0023848.1 MGP_CBAJ_G0016664.1 mouse_genomes_project 1 210643705 210644480 + Ptpn14 protein_coding processed_transcript MGP_CBAJ_T0022785.1 MGP_CBAJ_G0016409.1 mouse_genomes_project 1 180185838 180217833 - MGP_CBAJ_P0022785 Fmo3 protein_coding protein_coding MGP_CBAJ_T0022786.1 MGP_CBAJ_G0016409.1 mouse_genomes_project 1 180195550 180217834 - Fmo3 protein_coding retained_intron MGP_CBAJ_T0012017.1 MGP_CBAJ_G0010129.1 mouse_genomes_project 1 107416788 107417772 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005919.1 MGP_CBAJ_G0004955.1 mouse_genomes_project 1 200985603 200988118 + A430110L20Rik lincRNA lincRNA MGP_CBAJ_T0005920.1 MGP_CBAJ_G0004955.1 mouse_genomes_project 1 200985693 200988110 + A430110L20Rik lincRNA lincRNA MGP_CBAJ_T0000536.1 MGP_CBAJ_G0000478.1 mouse_genomes_project 1 104087136 104090944 + TEC TEC MGP_CBAJ_T0023014.1 MGP_CBAJ_G0016465.1 mouse_genomes_project 1 188108666 188143646 - MGP_CBAJ_P0023014 Uap1 protein_coding protein_coding MGP_CBAJ_T0023015.1 MGP_CBAJ_G0016465.1 mouse_genomes_project 1 188108730 188143635 - MGP_CBAJ_P0023015 Uap1 protein_coding protein_coding MGP_CBAJ_T0023016.1 MGP_CBAJ_G0016465.1 mouse_genomes_project 1 188108731 188143635 - MGP_CBAJ_P0023016 Uap1 protein_coding protein_coding MGP_CBAJ_T0023017.1 MGP_CBAJ_G0016465.1 mouse_genomes_project 1 188108762 188110442 - Uap1 protein_coding retained_intron MGP_CBAJ_T0023018.1 MGP_CBAJ_G0016465.1 mouse_genomes_project 1 188116455 188143481 - Uap1 protein_coding retained_intron MGP_CBAJ_T0023019.1 MGP_CBAJ_G0016465.1 mouse_genomes_project 1 188129805 188130381 - Uap1 protein_coding processed_transcript MGP_CBAJ_T0023020.1 MGP_CBAJ_G0016465.1 mouse_genomes_project 1 188129823 188143455 - Uap1 protein_coding processed_transcript MGP_CBAJ_T0023021.1 MGP_CBAJ_G0016465.1 mouse_genomes_project 1 188134856 188143478 - Uap1 protein_coding retained_intron MGP_CBAJ_T0023022.1 MGP_CBAJ_G0016465.1 mouse_genomes_project 1 188137850 188143575 - Uap1 protein_coding processed_transcript MGP_CBAJ_T0023304.1 MGP_CBAJ_G0016528.1 mouse_genomes_project 1 190841259 190852290 + Tagln2 protein_coding retained_intron MGP_CBAJ_T0023305.1 MGP_CBAJ_G0016528.1 mouse_genomes_project 1 190841259 190853768 + MGP_CBAJ_P0023305 Tagln2 protein_coding protein_coding MGP_CBAJ_T0023306.1 MGP_CBAJ_G0016528.1 mouse_genomes_project 1 190841457 190852208 + MGP_CBAJ_P0023306 Tagln2 protein_coding protein_coding MGP_CBAJ_T0023307.1 MGP_CBAJ_G0016528.1 mouse_genomes_project 1 190842477 190853121 + MGP_CBAJ_P0023307 Tagln2 protein_coding protein_coding MGP_CBAJ_T0019740.1 MGP_CBAJ_G0015800.1 mouse_genomes_project 1 62912771 62973117 + MGP_CBAJ_P0019740 Casp8 protein_coding protein_coding MGP_CBAJ_T0019741.1 MGP_CBAJ_G0015800.1 mouse_genomes_project 1 62912874 62972368 + MGP_CBAJ_P0019741 Casp8 protein_coding protein_coding MGP_CBAJ_T0019742.1 MGP_CBAJ_G0015800.1 mouse_genomes_project 1 62920908 62972622 + MGP_CBAJ_P0019742 Casp8 protein_coding protein_coding MGP_CBAJ_T0019743.1 MGP_CBAJ_G0015800.1 mouse_genomes_project 1 62921059 62972368 + MGP_CBAJ_P0019743 Casp8 protein_coding protein_coding MGP_CBAJ_T0101497.1 MGP_CBAJ_G0039529.1 mouse_genomes_project 1 192278323 192447482 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0005947.1 MGP_CBAJ_G0004972.1 mouse_genomes_project 1 205295175 205300388 + 4930433J02Rik lincRNA lincRNA MGP_CBAJ_T0005849.1 MGP_CBAJ_G0004898.1 mouse_genomes_project 1 166753474 166757016 + Gm29188 lincRNA lincRNA MGP_CBAJ_T0011733.1 MGP_CBAJ_G0009845.1 mouse_genomes_project 1 4402382 4403043 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002815.1 MGP_CBAJ_G0002656.1 mouse_genomes_project 1 144494771 144495818 + Gm28914 antisense antisense MGP_CBAJ_T0011780.1 MGP_CBAJ_G0009892.1 mouse_genomes_project 1 17414207 17415116 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009397.1 MGP_CBAJ_G0007535.1 mouse_genomes_project 1 94108656 94108713 - Gm22955 miRNA miRNA MGP_CBAJ_T0012230.1 MGP_CBAJ_G0010342.1 mouse_genomes_project 1 213960896 213961330 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009382.1 MGP_CBAJ_G0007520.1 mouse_genomes_project 1 79838965 79839064 - Mir6351 miRNA miRNA MGP_CBAJ_T0002766.1 MGP_CBAJ_G0002617.1 mouse_genomes_project 1 80297655 80298361 + Gm28364 antisense antisense MGP_CBAJ_T0002739.1 MGP_CBAJ_G0002601.1 mouse_genomes_project 1 61854847 61862124 - Gm17234 antisense antisense MGP_CBAJ_T0022054.1 MGP_CBAJ_G0016277.1 mouse_genomes_project 1 149901503 149973779 + MGP_CBAJ_P0022054 Cacna1s protein_coding protein_coding MGP_CBAJ_T0022055.1 MGP_CBAJ_G0016277.1 mouse_genomes_project 1 149901537 149973784 + MGP_CBAJ_P0022055 Cacna1s protein_coding protein_coding MGP_CBAJ_T0022056.1 MGP_CBAJ_G0016277.1 mouse_genomes_project 1 149901654 149974071 + MGP_CBAJ_P0022056 Cacna1s protein_coding protein_coding MGP_CBAJ_T0022057.1 MGP_CBAJ_G0016277.1 mouse_genomes_project 1 149922279 149973778 + MGP_CBAJ_P0022057 Cacna1s protein_coding protein_coding MGP_CBAJ_T0022058.1 MGP_CBAJ_G0016277.1 mouse_genomes_project 1 149959570 149966219 + Cacna1s protein_coding retained_intron MGP_CBAJ_T0022059.1 MGP_CBAJ_G0016277.1 mouse_genomes_project 1 149971504 149973778 + Cacna1s protein_coding processed_transcript MGP_CBAJ_T0005659.1 MGP_CBAJ_G0004746.1 mouse_genomes_project 1 65206889 65216305 - lincRNA lincRNA MGP_CBAJ_T0022900.1 MGP_CBAJ_G0016438.1 mouse_genomes_project 1 183310075 183325342 + MGP_CBAJ_P0022900 Creg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0022901.1 MGP_CBAJ_G0016438.1 mouse_genomes_project 1 183310075 183325342 + MGP_CBAJ_P0022901 Creg1 protein_coding protein_coding MGP_CBAJ_T0022902.1 MGP_CBAJ_G0016438.1 mouse_genomes_project 1 183317788 183323952 + MGP_CBAJ_P0022902 Creg1 protein_coding protein_coding MGP_CBAJ_T0020184.1 MGP_CBAJ_G0015884.1 mouse_genomes_project 1 80197401 80200244 - MGP_CBAJ_P0020184 Cxcr1 protein_coding protein_coding MGP_CBAJ_T0020185.1 MGP_CBAJ_G0015884.1 mouse_genomes_project 1 80197401 80198848 - MGP_CBAJ_P0020185 Cxcr1 protein_coding protein_coding MGP_CBAJ_T0011899.1 MGP_CBAJ_G0010011.1 mouse_genomes_project 1 56058003 56058865 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002835.1 MGP_CBAJ_G0002672.1 mouse_genomes_project 1 152641330 152679259 + Gm28501 antisense antisense MGP_CBAJ_T0009408.1 MGP_CBAJ_G0007546.1 mouse_genomes_project 1 115628833 115628915 + Gm22426 miRNA miRNA MGP_CBAJ_T0017547.1 MGP_CBAJ_G0015184.1 mouse_genomes_project 2 98692461 98701604 - Ptpmt1 processed_transcript processed_transcript MGP_CBAJ_T0017548.1 MGP_CBAJ_G0015184.1 mouse_genomes_project 2 98694458 98702005 - Ptpmt1 processed_transcript processed_transcript MGP_CBAJ_T0017549.1 MGP_CBAJ_G0015184.1 mouse_genomes_project 2 98694458 98701797 - Ptpmt1 processed_transcript processed_transcript MGP_CBAJ_T0017550.1 MGP_CBAJ_G0015184.1 mouse_genomes_project 2 98694739 98701342 - Ptpmt1 processed_transcript processed_transcript MGP_CBAJ_T0017551.1 MGP_CBAJ_G0015184.1 mouse_genomes_project 2 98697783 98701415 - Ptpmt1 processed_transcript processed_transcript MGP_CBAJ_T0013595.1 MGP_CBAJ_G0011707.1 mouse_genomes_project 2 150149201 150149671 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055454.1 MGP_CBAJ_G0025721.1 mouse_genomes_project 2 94642464 94643409 + MGP_CBAJ_P0055454 Olfr1129 protein_coding protein_coding MGP_CBAJ_T0010255.1 MGP_CBAJ_G0008393.1 mouse_genomes_project 2 24318091 24318217 + Gm22875 miRNA miRNA MGP_CBAJ_T0013271.1 MGP_CBAJ_G0011383.1 mouse_genomes_project 2 18483511 18483739 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057233.1 MGP_CBAJ_G0026187.1 mouse_genomes_project 2 141966194 141972763 - MGP_CBAJ_P0057233 Il1b protein_coding protein_coding MGP_CBAJ_T0057234.1 MGP_CBAJ_G0026187.1 mouse_genomes_project 2 141966746 141968976 - Il1b protein_coding processed_transcript MGP_CBAJ_T0057235.1 MGP_CBAJ_G0026187.1 mouse_genomes_project 2 141971353 141972763 - Il1b protein_coding retained_intron MGP_CBAJ_T0013372.1 MGP_CBAJ_G0011484.1 mouse_genomes_project 2 60438192 60438882 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000992.1 MGP_CBAJ_G0000924.1 mouse_genomes_project 2 9161025 9163697 - TEC TEC MGP_CBAJ_T0054967.1 MGP_CBAJ_G0025548.1 mouse_genomes_project 2 78515759 78545463 - MGP_CBAJ_P0054967 Cir1 protein_coding protein_coding MGP_CBAJ_T0054968.1 MGP_CBAJ_G0025548.1 mouse_genomes_project 2 78538680 78545328 - Cir1 protein_coding processed_transcript MGP_CBAJ_T0055240.1 MGP_CBAJ_G0025606.1 mouse_genomes_project 2 90240464 90306615 + MGP_CBAJ_P0055240 Fam171b protein_coding protein_coding MGP_CBAJ_T0055241.1 MGP_CBAJ_G0025606.1 mouse_genomes_project 2 90292122 90294500 + Fam171b protein_coding processed_transcript MGP_CBAJ_T0010228.1 MGP_CBAJ_G0008366.1 mouse_genomes_project 2 8385690 8385792 + Gm24342 miRNA miRNA MGP_CBAJ_T0056521.1 MGP_CBAJ_G0026036.1 mouse_genomes_project 2 130482833 130489689 + Vps18 protein_coding retained_intron MGP_CBAJ_T0056522.1 MGP_CBAJ_G0026036.1 mouse_genomes_project 2 130482835 130492618 + MGP_CBAJ_P0056522 Vps18 protein_coding protein_coding MGP_CBAJ_T0056523.1 MGP_CBAJ_G0026036.1 mouse_genomes_project 2 130482880 130492491 + Vps18 protein_coding processed_transcript MGP_CBAJ_T0052474.1 MGP_CBAJ_G0025103.1 mouse_genomes_project 2 21723284 21801658 + MGP_CBAJ_P0052474 Gad2 protein_coding protein_coding MGP_CBAJ_T0052475.1 MGP_CBAJ_G0025103.1 mouse_genomes_project 2 21724383 21731081 + Gad2 protein_coding processed_transcript MGP_CBAJ_T0013651.1 MGP_CBAJ_G0011763.1 mouse_genomes_project 2 171070264 171070555 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007063.1 MGP_CBAJ_G0005788.1 mouse_genomes_project 2 27927063 27928546 - Gm13371 lincRNA lincRNA MGP_CBAJ_T0007280.1 MGP_CBAJ_G0005962.1 mouse_genomes_project 2 177522770 177523362 - Gm14242 lincRNA lincRNA MGP_CBAJ_T0013646.1 MGP_CBAJ_G0011758.1 mouse_genomes_project 2 170302630 170323334 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013476.1 MGP_CBAJ_G0011588.1 mouse_genomes_project 2 94720663 94721120 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0058578.1 MGP_CBAJ_G0026495.1 mouse_genomes_project 2 174829190 174903712 + MGP_CBAJ_P0058578 Dhx35 protein_coding protein_coding MGP_CBAJ_T0058579.1 MGP_CBAJ_G0026495.1 mouse_genomes_project 2 174829190 174903712 + MGP_CBAJ_P0058579 Dhx35 protein_coding protein_coding MGP_CBAJ_T0058580.1 MGP_CBAJ_G0026495.1 mouse_genomes_project 2 174829245 174903712 + Dhx35 protein_coding processed_transcript MGP_CBAJ_T0058581.1 MGP_CBAJ_G0026495.1 mouse_genomes_project 2 174829248 174890488 + Dhx35 protein_coding retained_intron MGP_CBAJ_T0058582.1 MGP_CBAJ_G0026495.1 mouse_genomes_project 2 174829268 174873152 + MGP_CBAJ_P0058582 Dhx35 protein_coding protein_coding MGP_CBAJ_T0058583.1 MGP_CBAJ_G0026495.1 mouse_genomes_project 2 174829274 174861972 + Dhx35 protein_coding processed_transcript MGP_CBAJ_T0058584.1 MGP_CBAJ_G0026495.1 mouse_genomes_project 2 174830306 174835894 + Dhx35 protein_coding processed_transcript MGP_CBAJ_T0058585.1 MGP_CBAJ_G0026495.1 mouse_genomes_project 2 174870983 174878514 + Dhx35 protein_coding processed_transcript MGP_CBAJ_T0058586.1 MGP_CBAJ_G0026495.1 mouse_genomes_project 2 174894162 174902866 + Dhx35 protein_coding processed_transcript MGP_CBAJ_T0007195.1 MGP_CBAJ_G0005896.1 mouse_genomes_project 2 126070888 126073473 + Gm13976 lincRNA lincRNA MGP_CBAJ_T0053295.1 MGP_CBAJ_G0025255.1 mouse_genomes_project 2 29858361 29870737 + MGP_CBAJ_P0053295 Coq4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053296.1 MGP_CBAJ_G0025255.1 mouse_genomes_project 2 29859088 29869404 + MGP_CBAJ_P0053296 Coq4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053297.1 MGP_CBAJ_G0025255.1 mouse_genomes_project 2 29859127 29870545 + MGP_CBAJ_P0053297 Coq4 protein_coding protein_coding MGP_CBAJ_T0053298.1 MGP_CBAJ_G0025255.1 mouse_genomes_project 2 29859139 29868804 + MGP_CBAJ_P0053298 Coq4 protein_coding protein_coding MGP_CBAJ_T0053299.1 MGP_CBAJ_G0025255.1 mouse_genomes_project 2 29860845 29861507 + Coq4 protein_coding retained_intron MGP_CBAJ_T0053300.1 MGP_CBAJ_G0025255.1 mouse_genomes_project 2 29868366 29869788 + Coq4 protein_coding retained_intron MGP_CBAJ_T0057659.1 MGP_CBAJ_G0026282.1 mouse_genomes_project 2 158415372 158445497 - MGP_CBAJ_P0057659 Ovol2 protein_coding protein_coding MGP_CBAJ_T0057660.1 MGP_CBAJ_G0026282.1 mouse_genomes_project 2 158415372 158445948 - MGP_CBAJ_P0057660 Ovol2 protein_coding protein_coding MGP_CBAJ_T0057661.1 MGP_CBAJ_G0026282.1 mouse_genomes_project 2 158428123 158445128 - Ovol2 protein_coding processed_transcript MGP_CBAJ_T0004025.1 MGP_CBAJ_G0003560.1 mouse_genomes_project 2 145901364 145902622 - Gm14104 antisense antisense MGP_CBAJ_T0056261.1 MGP_CBAJ_G0025946.1 mouse_genomes_project 2 120776984 120800511 + MGP_CBAJ_P0056261 Muc15 protein_coding protein_coding MGP_CBAJ_T0056262.1 MGP_CBAJ_G0025946.1 mouse_genomes_project 2 120777255 120800511 + MGP_CBAJ_P0056262 Muc15 protein_coding protein_coding MGP_CBAJ_T0056263.1 MGP_CBAJ_G0025946.1 mouse_genomes_project 2 120777292 120798581 + MGP_CBAJ_P0056263 Muc15 protein_coding protein_coding MGP_CBAJ_T0013504.1 MGP_CBAJ_G0011616.1 mouse_genomes_project 2 108935563 108935747 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101788.1 MGP_CBAJ_G0039819.1 mouse_genomes_project 2 75055274 75057448 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013301.1 MGP_CBAJ_G0011413.1 mouse_genomes_project 2 32066341 32067255 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0057787.1 MGP_CBAJ_G0026315.1 mouse_genomes_project 2 163383765 163390610 + MGP_CBAJ_P0057787 Cst8 protein_coding protein_coding MGP_CBAJ_T0057788.1 MGP_CBAJ_G0026315.1 mouse_genomes_project 2 163383814 163390610 + MGP_CBAJ_P0057788 Cst8 protein_coding protein_coding MGP_CBAJ_T0057789.1 MGP_CBAJ_G0026315.1 mouse_genomes_project 2 163383883 163390610 + Cst8 protein_coding processed_transcript MGP_CBAJ_T0058087.1 MGP_CBAJ_G0026407.1 mouse_genomes_project 2 169566234 169586692 + MGP_CBAJ_P0058087 Bpifb5 protein_coding protein_coding MGP_CBAJ_T0053837.1 MGP_CBAJ_G0025331.1 mouse_genomes_project 2 33379540 33416585 + MGP_CBAJ_P0053837 Sh2d3c protein_coding protein_coding MGP_CBAJ_T0053838.1 MGP_CBAJ_G0025331.1 mouse_genomes_project 2 33386109 33403238 + Sh2d3c protein_coding processed_transcript MGP_CBAJ_T0053839.1 MGP_CBAJ_G0025331.1 mouse_genomes_project 2 33386109 33417102 + MGP_CBAJ_P0053839 Sh2d3c protein_coding protein_coding MGP_CBAJ_T0053842.1 MGP_CBAJ_G0025331.1 mouse_genomes_project 2 33393672 33399715 + Sh2d3c protein_coding processed_transcript MGP_CBAJ_T0053843.1 MGP_CBAJ_G0025331.1 mouse_genomes_project 2 33399883 33405458 + Sh2d3c protein_coding processed_transcript MGP_CBAJ_T0053844.1 MGP_CBAJ_G0025331.1 mouse_genomes_project 2 33399885 33402070 + Sh2d3c protein_coding processed_transcript MGP_CBAJ_T0059368.1 MGP_CBAJ_G0026694.1 mouse_genomes_project 2 199658414 199666045 + MGP_CBAJ_P0059368 Gid8 protein_coding protein_coding MGP_CBAJ_T0059369.1 MGP_CBAJ_G0026694.1 mouse_genomes_project 2 199659984 199663037 + Gid8 protein_coding processed_transcript MGP_CBAJ_T0059370.1 MGP_CBAJ_G0026694.1 mouse_genomes_project 2 199660843 199666042 + MGP_CBAJ_P0059370 Gid8 protein_coding protein_coding MGP_CBAJ_T0056091.1 MGP_CBAJ_G0025907.1 mouse_genomes_project 2 113227060 113252505 + MGP_CBAJ_P0056091 Lmo2 protein_coding protein_coding MGP_CBAJ_T0056092.1 MGP_CBAJ_G0025907.1 mouse_genomes_project 2 113227069 113253333 + MGP_CBAJ_P0056092 Lmo2 protein_coding protein_coding MGP_CBAJ_T0056094.1 MGP_CBAJ_G0025907.1 mouse_genomes_project 2 113240458 113252547 + MGP_CBAJ_P0056094 Lmo2 protein_coding protein_coding MGP_CBAJ_T0056095.1 MGP_CBAJ_G0025907.1 mouse_genomes_project 2 113241071 113253310 + MGP_CBAJ_P0056095 Lmo2 protein_coding protein_coding MGP_CBAJ_T0056096.1 MGP_CBAJ_G0025907.1 mouse_genomes_project 2 113241083 113247089 + MGP_CBAJ_P0056096 Lmo2 protein_coding protein_coding MGP_CBAJ_T0056097.1 MGP_CBAJ_G0025907.1 mouse_genomes_project 2 113241165 113253329 + MGP_CBAJ_P0056097 Lmo2 protein_coding protein_coding MGP_CBAJ_T0056098.1 MGP_CBAJ_G0025907.1 mouse_genomes_project 2 113241186 113253294 + MGP_CBAJ_P0056098 Lmo2 protein_coding protein_coding MGP_CBAJ_T0056099.1 MGP_CBAJ_G0025907.1 mouse_genomes_project 2 113242121 113252371 + Lmo2 protein_coding processed_transcript MGP_CBAJ_T0055314.1 MGP_CBAJ_G0025625.1 mouse_genomes_project 2 91339032 91363797 + MGP_CBAJ_P0055314 Slc43a1 protein_coding protein_coding MGP_CBAJ_T0055315.1 MGP_CBAJ_G0025625.1 mouse_genomes_project 2 91339577 91350318 + MGP_CBAJ_P0055315 Slc43a1 protein_coding protein_coding MGP_CBAJ_T0055316.1 MGP_CBAJ_G0025625.1 mouse_genomes_project 2 91339590 91363805 + MGP_CBAJ_P0055316 Slc43a1 protein_coding protein_coding MGP_CBAJ_T0055317.1 MGP_CBAJ_G0025625.1 mouse_genomes_project 2 91339599 91362607 + Slc43a1 protein_coding retained_intron MGP_CBAJ_T0055318.1 MGP_CBAJ_G0025625.1 mouse_genomes_project 2 91340380 91363800 + MGP_CBAJ_P0055318 Slc43a1 protein_coding protein_coding MGP_CBAJ_T0055319.1 MGP_CBAJ_G0025625.1 mouse_genomes_project 2 91340806 91363813 + MGP_CBAJ_P0055319 Slc43a1 protein_coding protein_coding MGP_CBAJ_T0054177.1 MGP_CBAJ_G0025410.1 mouse_genomes_project 2 38650953 38651793 + Gpr21 protein_coding processed_transcript MGP_CBAJ_T0054179.1 MGP_CBAJ_G0025410.1 mouse_genomes_project 2 38651247 38655225 + MGP_CBAJ_P0054179 Gpr21 protein_coding protein_coding MGP_CBAJ_T0013401.1 MGP_CBAJ_G0011513.1 mouse_genomes_project 2 70801732 70802104 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007059.1 MGP_CBAJ_G0005785.1 mouse_genomes_project 2 25693711 25700038 - lincRNA lincRNA MGP_CBAJ_T0007060.1 MGP_CBAJ_G0005785.1 mouse_genomes_project 2 25697899 25698319 - lincRNA lincRNA MGP_CBAJ_T0000991.1 MGP_CBAJ_G0000923.1 mouse_genomes_project 2 9149007 9149936 + TEC TEC MGP_CBAJ_T0058598.1 MGP_CBAJ_G0026500.1 mouse_genomes_project 2 176970714 177001915 + MGP_CBAJ_P0058598 Plcg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058599.1 MGP_CBAJ_G0026500.1 mouse_genomes_project 2 176970724 177015156 + MGP_CBAJ_P0058599 Plcg1 protein_coding protein_coding MGP_CBAJ_T0058600.1 MGP_CBAJ_G0026500.1 mouse_genomes_project 2 176971113 176987301 + MGP_CBAJ_P0058600 Plcg1 protein_coding protein_coding MGP_CBAJ_T0058601.1 MGP_CBAJ_G0026500.1 mouse_genomes_project 2 176971147 177002699 + MGP_CBAJ_P0058601 Plcg1 protein_coding protein_coding MGP_CBAJ_T0058602.1 MGP_CBAJ_G0026500.1 mouse_genomes_project 2 176980399 177001919 + Plcg1 protein_coding processed_transcript MGP_CBAJ_T0058604.1 MGP_CBAJ_G0026500.1 mouse_genomes_project 2 176991899 177001568 + Plcg1 protein_coding retained_intron MGP_CBAJ_T0058605.1 MGP_CBAJ_G0026500.1 mouse_genomes_project 2 176991964 176998320 + Plcg1 protein_coding retained_intron MGP_CBAJ_T0058606.1 MGP_CBAJ_G0026500.1 mouse_genomes_project 2 176993479 176994277 + Plcg1 protein_coding retained_intron MGP_CBAJ_T0058607.1 MGP_CBAJ_G0026500.1 mouse_genomes_project 2 176993959 176994582 + Plcg1 protein_coding retained_intron MGP_CBAJ_T0058608.1 MGP_CBAJ_G0026500.1 mouse_genomes_project 2 176993984 176998860 + Plcg1 protein_coding processed_transcript MGP_CBAJ_T0058609.1 MGP_CBAJ_G0026500.1 mouse_genomes_project 2 176994318 176996560 + Plcg1 protein_coding retained_intron MGP_CBAJ_T0058610.1 MGP_CBAJ_G0026500.1 mouse_genomes_project 2 176999530 177001630 + MGP_CBAJ_P0058610 Plcg1 protein_coding protein_coding MGP_CBAJ_T0013263.1 MGP_CBAJ_G0011375.1 mouse_genomes_project 2 16994816 16995230 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007244.1 MGP_CBAJ_G0005934.1 mouse_genomes_project 2 160821559 160827785 + lincRNA lincRNA MGP_CBAJ_T0055332.1 MGP_CBAJ_G0025630.1 mouse_genomes_project 2 91510451 91555262 - MGP_CBAJ_P0055332 P2rx3 protein_coding protein_coding MGP_CBAJ_T0055333.1 MGP_CBAJ_G0025630.1 mouse_genomes_project 2 91510652 91553122 - MGP_CBAJ_P0055333 P2rx3 protein_coding protein_coding MGP_CBAJ_T0055334.1 MGP_CBAJ_G0025630.1 mouse_genomes_project 2 91510822 91554894 - MGP_CBAJ_P0055334 P2rx3 protein_coding unknown_likely_coding MGP_CBAJ_T0055335.1 MGP_CBAJ_G0025630.1 mouse_genomes_project 2 91540171 91551080 - P2rx3 protein_coding processed_transcript MGP_CBAJ_T0055336.1 MGP_CBAJ_G0025630.1 mouse_genomes_project 2 91549822 91550964 - P2rx3 protein_coding processed_transcript MGP_CBAJ_T0004103.1 MGP_CBAJ_G0003623.1 mouse_genomes_project 2 191326694 191335588 - Gm14453 antisense antisense MGP_CBAJ_T0097806.1 MGP_CBAJ_G0036079.1 mouse_genomes_project 2 99872208 99872609 - pseudogene pseudogene MGP_CBAJ_T0013697.1 MGP_CBAJ_G0011809.1 mouse_genomes_project 2 198143700 198144451 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0058698.1 MGP_CBAJ_G0026521.1 mouse_genomes_project 2 180189350 180215351 - MGP_CBAJ_P0058698 Serinc3 protein_coding protein_coding MGP_CBAJ_T0058699.1 MGP_CBAJ_G0026521.1 mouse_genomes_project 2 180207051 180215345 - Serinc3 protein_coding processed_transcript MGP_CBAJ_T0010310.1 MGP_CBAJ_G0008448.1 mouse_genomes_project 2 101581443 101581522 - Mir7001 miRNA miRNA MGP_CBAJ_T0055464.1 MGP_CBAJ_G0025730.1 mouse_genomes_project 2 94804102 94805038 - MGP_CBAJ_P0055464 Olfr1138 protein_coding protein_coding MGP_CBAJ_T0056911.1 MGP_CBAJ_G0026105.1 mouse_genomes_project 2 133764920 133786426 + MGP_CBAJ_P0056911 Trim69 protein_coding protein_coding MGP_CBAJ_T0056912.1 MGP_CBAJ_G0026105.1 mouse_genomes_project 2 133765022 133786423 + Trim69 protein_coding processed_transcript MGP_CBAJ_T0058998.1 MGP_CBAJ_G0026600.1 mouse_genomes_project 2 184169182 184228042 - MGP_CBAJ_P0058998 Stau1 protein_coding protein_coding MGP_CBAJ_T0058999.1 MGP_CBAJ_G0026600.1 mouse_genomes_project 2 184169780 184177018 - Stau1 protein_coding retained_intron MGP_CBAJ_T0059000.1 MGP_CBAJ_G0026600.1 mouse_genomes_project 2 184169780 184228029 - MGP_CBAJ_P0059000 Stau1 protein_coding protein_coding MGP_CBAJ_T0059001.1 MGP_CBAJ_G0026600.1 mouse_genomes_project 2 184169780 184227867 - MGP_CBAJ_P0059001 Stau1 protein_coding protein_coding MGP_CBAJ_T0059002.1 MGP_CBAJ_G0026600.1 mouse_genomes_project 2 184169906 184228063 - MGP_CBAJ_P0059002 Stau1 protein_coding protein_coding MGP_CBAJ_T0059003.1 MGP_CBAJ_G0026600.1 mouse_genomes_project 2 184170879 184172865 - Stau1 protein_coding retained_intron MGP_CBAJ_T0059004.1 MGP_CBAJ_G0026600.1 mouse_genomes_project 2 184170925 184187851 - MGP_CBAJ_P0059004 Stau1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059005.1 MGP_CBAJ_G0026600.1 mouse_genomes_project 2 184171327 184172590 - Stau1 protein_coding retained_intron MGP_CBAJ_T0059006.1 MGP_CBAJ_G0026600.1 mouse_genomes_project 2 184173937 184181956 - Stau1 protein_coding retained_intron MGP_CBAJ_T0059007.1 MGP_CBAJ_G0026600.1 mouse_genomes_project 2 184174540 184186576 - Stau1 protein_coding retained_intron MGP_CBAJ_T0059008.1 MGP_CBAJ_G0026600.1 mouse_genomes_project 2 184186641 184202025 - Stau1 protein_coding processed_transcript MGP_CBAJ_T0056754.1 MGP_CBAJ_G0026078.1 mouse_genomes_project 2 132557049 132561761 + Adal protein_coding retained_intron MGP_CBAJ_T0056755.1 MGP_CBAJ_G0026078.1 mouse_genomes_project 2 132557060 132576396 + MGP_CBAJ_P0056755 Adal protein_coding protein_coding MGP_CBAJ_T0056756.1 MGP_CBAJ_G0026078.1 mouse_genomes_project 2 132557065 132561759 + Adal protein_coding retained_intron MGP_CBAJ_T0056757.1 MGP_CBAJ_G0026078.1 mouse_genomes_project 2 132557074 132570010 + Adal protein_coding processed_transcript MGP_CBAJ_T0056758.1 MGP_CBAJ_G0026078.1 mouse_genomes_project 2 132557120 132575307 + MGP_CBAJ_P0056758 Adal protein_coding protein_coding MGP_CBAJ_T0056759.1 MGP_CBAJ_G0026078.1 mouse_genomes_project 2 132557142 132570198 + Adal protein_coding retained_intron MGP_CBAJ_T0056760.1 MGP_CBAJ_G0026078.1 mouse_genomes_project 2 132558513 132575265 + MGP_CBAJ_P0056760 Adal protein_coding protein_coding MGP_CBAJ_T0056761.1 MGP_CBAJ_G0026078.1 mouse_genomes_project 2 132569773 132576057 + Adal protein_coding retained_intron MGP_CBAJ_T0053585.1 MGP_CBAJ_G0025294.1 mouse_genomes_project 2 31502956 31576909 + MGP_CBAJ_P0053585 Gpr107 protein_coding protein_coding MGP_CBAJ_T0053586.1 MGP_CBAJ_G0025294.1 mouse_genomes_project 2 31503179 31519936 + Gpr107 protein_coding retained_intron MGP_CBAJ_T0053587.1 MGP_CBAJ_G0025294.1 mouse_genomes_project 2 31503197 31547568 + Gpr107 protein_coding retained_intron MGP_CBAJ_T0053588.1 MGP_CBAJ_G0025294.1 mouse_genomes_project 2 31503197 31506438 + Gpr107 protein_coding retained_intron MGP_CBAJ_T0053589.1 MGP_CBAJ_G0025294.1 mouse_genomes_project 2 31523040 31540302 + Gpr107 protein_coding processed_transcript MGP_CBAJ_T0053590.1 MGP_CBAJ_G0025294.1 mouse_genomes_project 2 31540727 31567594 + Gpr107 protein_coding retained_intron MGP_CBAJ_T0053591.1 MGP_CBAJ_G0025294.1 mouse_genomes_project 2 31541057 31544205 + Gpr107 protein_coding processed_transcript MGP_CBAJ_T0053592.1 MGP_CBAJ_G0025294.1 mouse_genomes_project 2 31544223 31567776 + Gpr107 protein_coding retained_intron MGP_CBAJ_T0053593.1 MGP_CBAJ_G0025294.1 mouse_genomes_project 2 31555331 31566143 + Gpr107 protein_coding processed_transcript MGP_CBAJ_T0053594.1 MGP_CBAJ_G0025294.1 mouse_genomes_project 2 31565067 31568498 + Gpr107 protein_coding retained_intron MGP_CBAJ_T0053595.1 MGP_CBAJ_G0025294.1 mouse_genomes_project 2 31568535 31573002 + Gpr107 protein_coding retained_intron MGP_CBAJ_T0013594.1 MGP_CBAJ_G0011706.1 mouse_genomes_project 2 149769170 149769874 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0059208.1 MGP_CBAJ_G0026655.1 mouse_genomes_project 2 192119995 192122670 + MGP_CBAJ_P0059208 1700010B08Rik protein_coding protein_coding MGP_CBAJ_T0001068.1 MGP_CBAJ_G0000999.1 mouse_genomes_project 2 187787259 187788432 - TEC TEC MGP_CBAJ_T0001069.1 MGP_CBAJ_G0000999.1 mouse_genomes_project 2 187787372 187788232 - TEC TEC MGP_CBAJ_T0056114.1 MGP_CBAJ_G0025914.1 mouse_genomes_project 2 113452238 113771340 - MGP_CBAJ_P0056114 D430041D05Rik protein_coding protein_coding MGP_CBAJ_T0056115.1 MGP_CBAJ_G0025914.1 mouse_genomes_project 2 113456205 113556936 - D430041D05Rik protein_coding retained_intron MGP_CBAJ_T0056116.1 MGP_CBAJ_G0025914.1 mouse_genomes_project 2 113457936 113585169 - MGP_CBAJ_P0056116 D430041D05Rik protein_coding protein_coding MGP_CBAJ_T0056117.1 MGP_CBAJ_G0025914.1 mouse_genomes_project 2 113461332 113471332 - D430041D05Rik protein_coding retained_intron MGP_CBAJ_T0056118.1 MGP_CBAJ_G0025914.1 mouse_genomes_project 2 113502078 113567545 - D430041D05Rik protein_coding retained_intron MGP_CBAJ_T0056119.1 MGP_CBAJ_G0025914.1 mouse_genomes_project 2 113529910 113584335 - D430041D05Rik protein_coding retained_intron MGP_CBAJ_T0056120.1 MGP_CBAJ_G0025914.1 mouse_genomes_project 2 113581472 113770998 - MGP_CBAJ_P0056120 D430041D05Rik protein_coding protein_coding MGP_CBAJ_T0056121.1 MGP_CBAJ_G0025914.1 mouse_genomes_project 2 113581765 113770999 - MGP_CBAJ_P0056121 D430041D05Rik protein_coding protein_coding MGP_CBAJ_T0056203.1 MGP_CBAJ_G0025932.1 mouse_genomes_project 2 116380259 116573194 + MGP_CBAJ_P0056203 Mpped2 protein_coding protein_coding MGP_CBAJ_T0056204.1 MGP_CBAJ_G0025932.1 mouse_genomes_project 2 116382208 116438140 + MGP_CBAJ_P0056204 Mpped2 protein_coding protein_coding MGP_CBAJ_T0056205.1 MGP_CBAJ_G0025932.1 mouse_genomes_project 2 116382589 116572040 + MGP_CBAJ_P0056205 Mpped2 protein_coding protein_coding MGP_CBAJ_T0056206.1 MGP_CBAJ_G0025932.1 mouse_genomes_project 2 116382611 116478095 + Mpped2 protein_coding processed_transcript MGP_CBAJ_T0056207.1 MGP_CBAJ_G0025932.1 mouse_genomes_project 2 116382842 116571869 + MGP_CBAJ_P0056207 Mpped2 protein_coding protein_coding MGP_CBAJ_T0056208.1 MGP_CBAJ_G0025932.1 mouse_genomes_project 2 116423924 116478214 + Mpped2 protein_coding processed_transcript MGP_CBAJ_T0007217.1 MGP_CBAJ_G0005911.1 mouse_genomes_project 2 136181359 136188147 - 4930583P06Rik lincRNA lincRNA MGP_CBAJ_T0057479.1 MGP_CBAJ_G0026240.1 mouse_genomes_project 2 145226483 145265861 + MGP_CBAJ_P0057479 Cds2 protein_coding protein_coding MGP_CBAJ_T0057480.1 MGP_CBAJ_G0026240.1 mouse_genomes_project 2 145226582 145266940 + MGP_CBAJ_P0057480 Cds2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057481.1 MGP_CBAJ_G0026240.1 mouse_genomes_project 2 145226785 145274934 + MGP_CBAJ_P0057481 Cds2 protein_coding protein_coding MGP_CBAJ_T0057482.1 MGP_CBAJ_G0026240.1 mouse_genomes_project 2 145250839 145265257 + MGP_CBAJ_P0057482 Cds2 protein_coding protein_coding MGP_CBAJ_T0057483.1 MGP_CBAJ_G0026240.1 mouse_genomes_project 2 145270952 145274977 + MGP_CBAJ_P0057483 Cds2 protein_coding protein_coding MGP_CBAJ_T0055359.1 MGP_CBAJ_G0025636.1 mouse_genomes_project 2 91886746 91913568 - MGP_CBAJ_P0055359 protein_coding protein_coding MGP_CBAJ_T0101813.1 MGP_CBAJ_G0039844.1 mouse_genomes_project 2 95246518 95247469 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0017663.1 MGP_CBAJ_G0015236.1 mouse_genomes_project 2 186350384 186352351 + Gm14261 processed_transcript processed_transcript MGP_CBAJ_T0053057.1 MGP_CBAJ_G0025211.1 mouse_genomes_project 2 26611142 26618674 + MGP_CBAJ_P0053057 Rpl7a protein_coding protein_coding MGP_CBAJ_T0053058.1 MGP_CBAJ_G0025211.1 mouse_genomes_project 2 26611195 26618413 + Rpl7a protein_coding processed_transcript MGP_CBAJ_T0053059.1 MGP_CBAJ_G0025211.1 mouse_genomes_project 2 26611199 26618674 + Rpl7a protein_coding processed_transcript MGP_CBAJ_T0053060.1 MGP_CBAJ_G0025211.1 mouse_genomes_project 2 26611206 26618678 + MGP_CBAJ_P0053060 Rpl7a protein_coding unknown_likely_coding MGP_CBAJ_T0053061.1 MGP_CBAJ_G0025211.1 mouse_genomes_project 2 26611206 26618678 + MGP_CBAJ_P0053061 Rpl7a protein_coding unknown_likely_coding MGP_CBAJ_T0053062.1 MGP_CBAJ_G0025211.1 mouse_genomes_project 2 26611384 26618674 + Rpl7a protein_coding processed_transcript MGP_CBAJ_T0053063.1 MGP_CBAJ_G0025211.1 mouse_genomes_project 2 26617547 26618674 + Rpl7a protein_coding processed_transcript MGP_CBAJ_T0053064.1 MGP_CBAJ_G0025211.1 mouse_genomes_project 2 26617974 26618674 + Rpl7a protein_coding processed_transcript MGP_CBAJ_T0053065.1 MGP_CBAJ_G0025211.1 mouse_genomes_project 2 26618026 26618568 + Rpl7a protein_coding processed_transcript MGP_CBAJ_T0007037.1 MGP_CBAJ_G0005768.1 mouse_genomes_project 2 8986393 9011624 + Gm13264 lincRNA lincRNA MGP_CBAJ_T0057396.1 MGP_CBAJ_G0026223.1 mouse_genomes_project 2 143989490 143993207 - MGP_CBAJ_P0057396 Spef1 protein_coding protein_coding MGP_CBAJ_T0055633.1 MGP_CBAJ_G0025835.1 mouse_genomes_project 2 98688494 98694307 + MGP_CBAJ_P0055633 Kbtbd4 protein_coding protein_coding MGP_CBAJ_T0055634.1 MGP_CBAJ_G0025835.1 mouse_genomes_project 2 98688497 98694307 + MGP_CBAJ_P0055634 Kbtbd4 protein_coding protein_coding MGP_CBAJ_T0055635.1 MGP_CBAJ_G0025835.1 mouse_genomes_project 2 98688523 98689372 + Kbtbd4 protein_coding processed_transcript MGP_CBAJ_T0055636.1 MGP_CBAJ_G0025835.1 mouse_genomes_project 2 98688829 98689808 + Kbtbd4 protein_coding processed_transcript MGP_CBAJ_T0055637.1 MGP_CBAJ_G0025835.1 mouse_genomes_project 2 98692909 98695372 + Kbtbd4 protein_coding processed_transcript MGP_CBAJ_T0059337.1 MGP_CBAJ_G0026687.1 mouse_genomes_project 2 199368029 199389518 + MGP_CBAJ_P0059337 Slco4a1 protein_coding protein_coding MGP_CBAJ_T0059338.1 MGP_CBAJ_G0026687.1 mouse_genomes_project 2 199368118 199389496 + Slco4a1 protein_coding processed_transcript MGP_CBAJ_T0059339.1 MGP_CBAJ_G0026687.1 mouse_genomes_project 2 199372778 199389518 + MGP_CBAJ_P0059339 Slco4a1 protein_coding protein_coding MGP_CBAJ_T0059340.1 MGP_CBAJ_G0026687.1 mouse_genomes_project 2 199378884 199380207 + Slco4a1 protein_coding retained_intron MGP_CBAJ_T0059341.1 MGP_CBAJ_G0026687.1 mouse_genomes_project 2 199384263 199389503 + Slco4a1 protein_coding retained_intron MGP_CBAJ_T0056076.1 MGP_CBAJ_G0025906.1 mouse_genomes_project 2 113020133 113054346 - MGP_CBAJ_P0056076 Caprin1 protein_coding protein_coding MGP_CBAJ_T0056077.1 MGP_CBAJ_G0025906.1 mouse_genomes_project 2 113022210 113053801 - MGP_CBAJ_P0056077 Caprin1 protein_coding protein_coding MGP_CBAJ_T0056078.1 MGP_CBAJ_G0025906.1 mouse_genomes_project 2 113024297 113029967 - MGP_CBAJ_P0056078 Caprin1 protein_coding protein_coding MGP_CBAJ_T0056079.1 MGP_CBAJ_G0025906.1 mouse_genomes_project 2 113025002 113028983 - MGP_CBAJ_P0056079 Caprin1 protein_coding protein_coding MGP_CBAJ_T0056080.1 MGP_CBAJ_G0025906.1 mouse_genomes_project 2 113025640 113029870 - Caprin1 protein_coding retained_intron MGP_CBAJ_T0056081.1 MGP_CBAJ_G0025906.1 mouse_genomes_project 2 113028900 113031456 - Caprin1 protein_coding retained_intron MGP_CBAJ_T0056082.1 MGP_CBAJ_G0025906.1 mouse_genomes_project 2 113029934 113030898 - Caprin1 protein_coding processed_transcript MGP_CBAJ_T0056083.1 MGP_CBAJ_G0025906.1 mouse_genomes_project 2 113030183 113036559 - MGP_CBAJ_P0056083 Caprin1 protein_coding protein_coding MGP_CBAJ_T0056084.1 MGP_CBAJ_G0025906.1 mouse_genomes_project 2 113030186 113033198 - Caprin1 protein_coding retained_intron MGP_CBAJ_T0056085.1 MGP_CBAJ_G0025906.1 mouse_genomes_project 2 113030657 113032844 - Caprin1 protein_coding processed_transcript MGP_CBAJ_T0056086.1 MGP_CBAJ_G0025906.1 mouse_genomes_project 2 113035153 113053630 - Caprin1 protein_coding processed_transcript MGP_CBAJ_T0056087.1 MGP_CBAJ_G0025906.1 mouse_genomes_project 2 113036714 113053241 - Caprin1 protein_coding processed_transcript MGP_CBAJ_T0056088.1 MGP_CBAJ_G0025906.1 mouse_genomes_project 2 113039470 113053670 - Caprin1 protein_coding retained_intron MGP_CBAJ_T0056089.1 MGP_CBAJ_G0025906.1 mouse_genomes_project 2 113039868 113053565 - Caprin1 protein_coding processed_transcript MGP_CBAJ_T0056090.1 MGP_CBAJ_G0025906.1 mouse_genomes_project 2 113053148 113054296 - Caprin1 protein_coding retained_intron MGP_CBAJ_T0059389.1 MGP_CBAJ_G0026700.1 mouse_genomes_project 2 199953495 199970003 + MGP_CBAJ_P0059389 Arfgap1 protein_coding protein_coding MGP_CBAJ_T0059390.1 MGP_CBAJ_G0026700.1 mouse_genomes_project 2 199953504 199970071 + MGP_CBAJ_P0059390 Arfgap1 protein_coding protein_coding MGP_CBAJ_T0059391.1 MGP_CBAJ_G0026700.1 mouse_genomes_project 2 199953515 199969245 + MGP_CBAJ_P0059391 Arfgap1 protein_coding protein_coding MGP_CBAJ_T0059392.1 MGP_CBAJ_G0026700.1 mouse_genomes_project 2 199953535 199970005 + Arfgap1 protein_coding retained_intron MGP_CBAJ_T0059393.1 MGP_CBAJ_G0026700.1 mouse_genomes_project 2 199953537 199969991 + Arfgap1 protein_coding processed_transcript MGP_CBAJ_T0059394.1 MGP_CBAJ_G0026700.1 mouse_genomes_project 2 199953547 199970005 + MGP_CBAJ_P0059394 Arfgap1 protein_coding protein_coding MGP_CBAJ_T0059395.1 MGP_CBAJ_G0026700.1 mouse_genomes_project 2 199953549 199960494 + Arfgap1 protein_coding retained_intron MGP_CBAJ_T0059396.1 MGP_CBAJ_G0026700.1 mouse_genomes_project 2 199953570 199969856 + MGP_CBAJ_P0059396 Arfgap1 protein_coding protein_coding MGP_CBAJ_T0059397.1 MGP_CBAJ_G0026700.1 mouse_genomes_project 2 199958604 199969018 + MGP_CBAJ_P0059397 Arfgap1 protein_coding protein_coding MGP_CBAJ_T0059398.1 MGP_CBAJ_G0026700.1 mouse_genomes_project 2 199958619 199968915 + MGP_CBAJ_P0059398 Arfgap1 protein_coding protein_coding MGP_CBAJ_T0059399.1 MGP_CBAJ_G0026700.1 mouse_genomes_project 2 199961050 199964299 + Arfgap1 protein_coding retained_intron MGP_CBAJ_T0059400.1 MGP_CBAJ_G0026700.1 mouse_genomes_project 2 199961067 199965587 + Arfgap1 protein_coding retained_intron MGP_CBAJ_T0059401.1 MGP_CBAJ_G0026700.1 mouse_genomes_project 2 199961395 199965071 + Arfgap1 protein_coding retained_intron MGP_CBAJ_T0059402.1 MGP_CBAJ_G0026700.1 mouse_genomes_project 2 199967893 199968942 + Arfgap1 protein_coding processed_transcript MGP_CBAJ_T0013375.1 MGP_CBAJ_G0011487.1 mouse_genomes_project 2 60813502 60814045 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010257.1 MGP_CBAJ_G0008395.1 mouse_genomes_project 2 24475358 24475421 + Mir7664 miRNA miRNA MGP_CBAJ_T0101084.1 MGP_CBAJ_G0039294.1 mouse_genomes_project 2 80259731 80260337 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0053604.1 MGP_CBAJ_G0025297.1 mouse_genomes_project 2 31852197 31913890 + MGP_CBAJ_P0053604 Ass1 protein_coding protein_coding MGP_CBAJ_T0053605.1 MGP_CBAJ_G0025297.1 mouse_genomes_project 2 31852222 31913891 + MGP_CBAJ_P0053605 Ass1 protein_coding unknown_likely_coding MGP_CBAJ_T0053606.1 MGP_CBAJ_G0025297.1 mouse_genomes_project 2 31883812 31903388 + Ass1 protein_coding retained_intron MGP_CBAJ_T0053607.1 MGP_CBAJ_G0025297.1 mouse_genomes_project 2 31886766 31908007 + Ass1 protein_coding retained_intron MGP_CBAJ_T0053608.1 MGP_CBAJ_G0025297.1 mouse_genomes_project 2 31911722 31913749 + Ass1 protein_coding retained_intron MGP_CBAJ_T0056498.1 MGP_CBAJ_G0026029.1 mouse_genomes_project 2 130341218 130345535 + MGP_CBAJ_P0056498 Gchfr protein_coding protein_coding MGP_CBAJ_T0053047.1 MGP_CBAJ_G0025209.1 mouse_genomes_project 2 26574576 26578551 - Surf6 protein_coding processed_transcript MGP_CBAJ_T0053048.1 MGP_CBAJ_G0025209.1 mouse_genomes_project 2 26574873 26578113 - Surf6 protein_coding processed_transcript MGP_CBAJ_T0053049.1 MGP_CBAJ_G0025209.1 mouse_genomes_project 2 26574937 26599808 - Surf6 protein_coding processed_transcript MGP_CBAJ_T0053050.1 MGP_CBAJ_G0025209.1 mouse_genomes_project 2 26576374 26603262 - MGP_CBAJ_P0053050 Surf6 protein_coding protein_coding MGP_CBAJ_T0053051.1 MGP_CBAJ_G0025209.1 mouse_genomes_project 2 26576711 26603233 - MGP_CBAJ_P0053051 Surf6 protein_coding protein_coding MGP_CBAJ_T0053052.1 MGP_CBAJ_G0025209.1 mouse_genomes_project 2 26578614 26603173 - Surf6 protein_coding processed_transcript MGP_CBAJ_T0053053.1 MGP_CBAJ_G0025209.1 mouse_genomes_project 2 26599476 26600151 - Surf6 protein_coding processed_transcript MGP_CBAJ_T0007281.1 MGP_CBAJ_G0005963.1 mouse_genomes_project 2 177674090 177675030 + Gm14241 lincRNA lincRNA MGP_CBAJ_T0013413.1 MGP_CBAJ_G0011525.1 mouse_genomes_project 2 75751408 75752306 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0056102.1 MGP_CBAJ_G0025909.1 mouse_genomes_project 2 113300728 113337090 + MGP_CBAJ_P0056102 Fbxo3 protein_coding protein_coding MGP_CBAJ_T0056103.1 MGP_CBAJ_G0025909.1 mouse_genomes_project 2 113300845 113331373 + MGP_CBAJ_P0056103 Fbxo3 protein_coding protein_coding MGP_CBAJ_T0056104.1 MGP_CBAJ_G0025909.1 mouse_genomes_project 2 113300847 113336853 + MGP_CBAJ_P0056104 Fbxo3 protein_coding protein_coding MGP_CBAJ_T0056105.1 MGP_CBAJ_G0025909.1 mouse_genomes_project 2 113300849 113331340 + Fbxo3 protein_coding processed_transcript MGP_CBAJ_T0056106.1 MGP_CBAJ_G0025909.1 mouse_genomes_project 2 113300861 113331354 + MGP_CBAJ_P0056106 Fbxo3 protein_coding protein_coding MGP_CBAJ_T0056107.1 MGP_CBAJ_G0025909.1 mouse_genomes_project 2 113300864 113329864 + MGP_CBAJ_P0056107 Fbxo3 protein_coding unknown_likely_coding MGP_CBAJ_T0054469.1 MGP_CBAJ_G0025459.1 mouse_genomes_project 2 61612806 61653420 - MGP_CBAJ_P0054469 Cytip protein_coding protein_coding MGP_CBAJ_T0054470.1 MGP_CBAJ_G0025459.1 mouse_genomes_project 2 61618699 61690855 - Cytip protein_coding processed_transcript MGP_CBAJ_T0054471.1 MGP_CBAJ_G0025459.1 mouse_genomes_project 2 61618784 61690865 - Cytip protein_coding processed_transcript MGP_CBAJ_T0054472.1 MGP_CBAJ_G0025459.1 mouse_genomes_project 2 61618916 61649711 - Cytip protein_coding processed_transcript MGP_CBAJ_T0054473.1 MGP_CBAJ_G0025459.1 mouse_genomes_project 2 61634719 61653046 - Cytip protein_coding processed_transcript MGP_CBAJ_T0054474.1 MGP_CBAJ_G0025459.1 mouse_genomes_project 2 61634894 61690866 - Cytip protein_coding processed_transcript MGP_CBAJ_T0054475.1 MGP_CBAJ_G0025459.1 mouse_genomes_project 2 61652902 61690870 - Cytip protein_coding processed_transcript MGP_CBAJ_T0054476.1 MGP_CBAJ_G0025459.1 mouse_genomes_project 2 61652963 61653582 - Cytip protein_coding processed_transcript MGP_CBAJ_T0059211.1 MGP_CBAJ_G0026657.1 mouse_genomes_project 2 192518056 192537006 + MGP_CBAJ_P0059211 Stx16 protein_coding protein_coding MGP_CBAJ_T0059212.1 MGP_CBAJ_G0026657.1 mouse_genomes_project 2 192518066 192535307 + MGP_CBAJ_P0059212 Stx16 protein_coding protein_coding MGP_CBAJ_T0059213.1 MGP_CBAJ_G0026657.1 mouse_genomes_project 2 192518070 192538099 + MGP_CBAJ_P0059213 Stx16 protein_coding protein_coding MGP_CBAJ_T0059214.1 MGP_CBAJ_G0026657.1 mouse_genomes_project 2 192518670 192547030 + MGP_CBAJ_P0059214 Stx16 protein_coding protein_coding MGP_CBAJ_T0059215.1 MGP_CBAJ_G0026657.1 mouse_genomes_project 2 192518806 192547029 + MGP_CBAJ_P0059215 Stx16 protein_coding protein_coding MGP_CBAJ_T0059216.1 MGP_CBAJ_G0026657.1 mouse_genomes_project 2 192518814 192541541 + MGP_CBAJ_P0059216 Stx16 protein_coding protein_coding MGP_CBAJ_T0013663.1 MGP_CBAJ_G0011775.1 mouse_genomes_project 2 174385071 174385360 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101083.1 MGP_CBAJ_G0039293.1 mouse_genomes_project 2 55664549 55664934 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0057939.1 MGP_CBAJ_G0026362.1 mouse_genomes_project 2 167597838 167599223 - MGP_CBAJ_P0057939 Defb29 protein_coding protein_coding MGP_CBAJ_T0059326.1 MGP_CBAJ_G0026683.1 mouse_genomes_project 2 199157131 199158200 + MGP_CBAJ_P0059326 Rps21 protein_coding protein_coding MGP_CBAJ_T0059327.1 MGP_CBAJ_G0026683.1 mouse_genomes_project 2 199157133 199158197 + Rps21 protein_coding retained_intron MGP_CBAJ_T0059328.1 MGP_CBAJ_G0026683.1 mouse_genomes_project 2 199157172 199157749 + Rps21 protein_coding retained_intron MGP_CBAJ_T0059329.1 MGP_CBAJ_G0026683.1 mouse_genomes_project 2 199157172 199157898 + Rps21 protein_coding retained_intron MGP_CBAJ_T0003877.1 MGP_CBAJ_G0003460.1 mouse_genomes_project 2 33555894 33558141 - Gm13523 antisense antisense MGP_CBAJ_T0054723.1 MGP_CBAJ_G0025498.1 mouse_genomes_project 2 71068338 71180798 - MGP_CBAJ_P0054723 Scn7a protein_coding protein_coding MGP_CBAJ_T0007247.1 MGP_CBAJ_G0005937.1 mouse_genomes_project 2 162170574 162181372 + A530006G24Rik lincRNA lincRNA MGP_CBAJ_T0017499.1 MGP_CBAJ_G0015149.1 mouse_genomes_project 2 29240053 29247940 - 6530402F18Rik processed_transcript processed_transcript MGP_CBAJ_T0017500.1 MGP_CBAJ_G0015149.1 mouse_genomes_project 2 29245856 29247953 - 6530402F18Rik processed_transcript processed_transcript MGP_CBAJ_T0055067.1 MGP_CBAJ_G0025574.1 mouse_genomes_project 2 81532853 81540598 - MGP_CBAJ_P0055067 Ttc30a2 protein_coding protein_coding MGP_CBAJ_T0057794.1 MGP_CBAJ_G0026319.1 mouse_genomes_project 2 163472741 163476596 - MGP_CBAJ_P0057794 Cst3 protein_coding protein_coding MGP_CBAJ_T0057795.1 MGP_CBAJ_G0026319.1 mouse_genomes_project 2 163473488 163476471 - Cst3 protein_coding processed_transcript MGP_CBAJ_T0057796.1 MGP_CBAJ_G0026319.1 mouse_genomes_project 2 163473864 163476712 - MGP_CBAJ_P0057796 Cst3 protein_coding protein_coding MGP_CBAJ_T0052416.1 MGP_CBAJ_G0025095.1 mouse_genomes_project 2 18428281 18533423 - MGP_CBAJ_P0052416 4921504E06Rik protein_coding protein_coding MGP_CBAJ_T0052417.1 MGP_CBAJ_G0025095.1 mouse_genomes_project 2 18461696 18533423 - 4921504E06Rik protein_coding retained_intron MGP_CBAJ_T0058735.1 MGP_CBAJ_G0026534.1 mouse_genomes_project 2 180812725 180813993 - MGP_CBAJ_P0058735 Wfdc15a protein_coding protein_coding MGP_CBAJ_T0101835.1 MGP_CBAJ_G0039866.1 mouse_genomes_project 2 172623613 172675153 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0003846.1 MGP_CBAJ_G0003436.1 mouse_genomes_project 2 25211011 25215675 - A230005M16Rik antisense antisense MGP_CBAJ_T0003847.1 MGP_CBAJ_G0003436.1 mouse_genomes_project 2 25211668 25213427 - A230005M16Rik antisense antisense MGP_CBAJ_T0004085.1 MGP_CBAJ_G0003608.1 mouse_genomes_project 2 181536634 181554383 - Gm11457 antisense antisense MGP_CBAJ_T0004086.1 MGP_CBAJ_G0003608.1 mouse_genomes_project 2 181536644 181554388 - Gm11457 antisense antisense MGP_CBAJ_T0004087.1 MGP_CBAJ_G0003608.1 mouse_genomes_project 2 181536656 181554430 - Gm11457 antisense antisense MGP_CBAJ_T0052468.1 MGP_CBAJ_G0025102.1 mouse_genomes_project 2 21410231 21717029 + MGP_CBAJ_P0052468 Myo3a protein_coding protein_coding MGP_CBAJ_T0052469.1 MGP_CBAJ_G0025102.1 mouse_genomes_project 2 21410233 21486042 + Myo3a protein_coding processed_transcript MGP_CBAJ_T0052470.1 MGP_CBAJ_G0025102.1 mouse_genomes_project 2 21410233 21475695 + Myo3a protein_coding processed_transcript MGP_CBAJ_T0052471.1 MGP_CBAJ_G0025102.1 mouse_genomes_project 2 21423782 21608125 + MGP_CBAJ_P0052471 Myo3a protein_coding protein_coding MGP_CBAJ_T0052472.1 MGP_CBAJ_G0025102.1 mouse_genomes_project 2 21650786 21717024 + MGP_CBAJ_P0052472 Myo3a protein_coding protein_coding MGP_CBAJ_T0052473.1 MGP_CBAJ_G0025102.1 mouse_genomes_project 2 21675939 21701159 + Myo3a protein_coding processed_transcript MGP_CBAJ_T0003822.1 MGP_CBAJ_G0003417.1 mouse_genomes_project 2 7732020 7743831 + Gm13262 antisense antisense MGP_CBAJ_T0010326.1 MGP_CBAJ_G0008464.1 mouse_genomes_project 2 132365574 132365651 - Gm44325 miRNA miRNA MGP_CBAJ_T0056346.1 MGP_CBAJ_G0025996.1 mouse_genomes_project 2 124549609 124553630 - MGP_CBAJ_P0056346 Gjd2 protein_coding protein_coding MGP_CBAJ_T0056143.1 MGP_CBAJ_G0025920.1 mouse_genomes_project 2 114179036 114244168 - MGP_CBAJ_P0056143 Qser1 protein_coding protein_coding MGP_CBAJ_T0055548.1 MGP_CBAJ_G0025802.1 mouse_genomes_project 2 97144006 97144951 - MGP_CBAJ_P0055548 Olfr1246 protein_coding protein_coding MGP_CBAJ_T0056716.1 MGP_CBAJ_G0026070.1 mouse_genomes_project 2 132111682 132223857 - MGP_CBAJ_P0056716 Ttbk2 protein_coding protein_coding MGP_CBAJ_T0056717.1 MGP_CBAJ_G0026070.1 mouse_genomes_project 2 132111682 132223671 - MGP_CBAJ_P0056717 Ttbk2 protein_coding protein_coding MGP_CBAJ_T0056718.1 MGP_CBAJ_G0026070.1 mouse_genomes_project 2 132111682 132223657 - MGP_CBAJ_P0056718 Ttbk2 protein_coding protein_coding MGP_CBAJ_T0056719.1 MGP_CBAJ_G0026070.1 mouse_genomes_project 2 132124526 132223641 - MGP_CBAJ_P0056719 Ttbk2 protein_coding protein_coding MGP_CBAJ_T0056720.1 MGP_CBAJ_G0026070.1 mouse_genomes_project 2 132129749 132223615 - MGP_CBAJ_P0056720 Ttbk2 protein_coding protein_coding MGP_CBAJ_T0056721.1 MGP_CBAJ_G0026070.1 mouse_genomes_project 2 132173307 132223688 - Ttbk2 protein_coding processed_transcript MGP_CBAJ_T0057059.1 MGP_CBAJ_G0026143.1 mouse_genomes_project 2 139047012 139059526 - Usp50 protein_coding processed_transcript MGP_CBAJ_T0057060.1 MGP_CBAJ_G0026143.1 mouse_genomes_project 2 139047387 139074848 - MGP_CBAJ_P0057060 Usp50 protein_coding protein_coding MGP_CBAJ_T0057061.1 MGP_CBAJ_G0026143.1 mouse_genomes_project 2 139067213 139074841 - MGP_CBAJ_P0057061 Usp50 protein_coding protein_coding MGP_CBAJ_T0057062.1 MGP_CBAJ_G0026143.1 mouse_genomes_project 2 139069127 139074862 - Usp50 protein_coding retained_intron MGP_CBAJ_T0003929.1 MGP_CBAJ_G0003498.1 mouse_genomes_project 2 77321426 77329046 - Rapgef4os2 antisense antisense MGP_CBAJ_T0013268.1 MGP_CBAJ_G0011380.1 mouse_genomes_project 2 17534958 17535220 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055118.1 MGP_CBAJ_G0025584.1 mouse_genomes_project 2 82657289 82831947 - MGP_CBAJ_P0055118 Ccdc141 protein_coding protein_coding MGP_CBAJ_T0055119.1 MGP_CBAJ_G0025584.1 mouse_genomes_project 2 82657382 82831929 - MGP_CBAJ_P0055119 Ccdc141 protein_coding protein_coding MGP_CBAJ_T0055120.1 MGP_CBAJ_G0025584.1 mouse_genomes_project 2 82658934 82667305 - MGP_CBAJ_P0055120 Ccdc141 protein_coding protein_coding MGP_CBAJ_T0055121.1 MGP_CBAJ_G0025584.1 mouse_genomes_project 2 82662438 82670084 - Ccdc141 protein_coding processed_transcript MGP_CBAJ_T0055122.1 MGP_CBAJ_G0025584.1 mouse_genomes_project 2 82670774 82678038 - Ccdc141 protein_coding retained_intron MGP_CBAJ_T0055123.1 MGP_CBAJ_G0025584.1 mouse_genomes_project 2 82678035 82691125 - Ccdc141 protein_coding retained_intron MGP_CBAJ_T0055124.1 MGP_CBAJ_G0025584.1 mouse_genomes_project 2 82678035 82691775 - MGP_CBAJ_P0055124 Ccdc141 protein_coding protein_coding MGP_CBAJ_T0055125.1 MGP_CBAJ_G0025584.1 mouse_genomes_project 2 82692015 82831948 - Ccdc141 protein_coding retained_intron MGP_CBAJ_T0055126.1 MGP_CBAJ_G0025584.1 mouse_genomes_project 2 82725643 82831922 - Ccdc141 protein_coding retained_intron MGP_CBAJ_T0055127.1 MGP_CBAJ_G0025584.1 mouse_genomes_project 2 82791761 82831912 - MGP_CBAJ_P0055127 Ccdc141 protein_coding nonsense_mediated_decay MGP_CBAJ_T0055128.1 MGP_CBAJ_G0025584.1 mouse_genomes_project 2 82823294 82831888 - MGP_CBAJ_P0055128 Ccdc141 protein_coding protein_coding MGP_CBAJ_T0055296.1 MGP_CBAJ_G0025618.1 mouse_genomes_project 2 91205726 91210609 - MGP_CBAJ_P0055296 Clp1 protein_coding protein_coding MGP_CBAJ_T0055297.1 MGP_CBAJ_G0025618.1 mouse_genomes_project 2 91206485 91210717 - MGP_CBAJ_P0055297 Clp1 protein_coding protein_coding MGP_CBAJ_T0055298.1 MGP_CBAJ_G0025618.1 mouse_genomes_project 2 91206487 91210643 - Clp1 protein_coding processed_transcript MGP_CBAJ_T0059569.1 MGP_CBAJ_G0026727.1 mouse_genomes_project 2 200772358 200777852 - MGP_CBAJ_P0059569 Rgs19 protein_coding protein_coding MGP_CBAJ_T0059570.1 MGP_CBAJ_G0026727.1 mouse_genomes_project 2 200772364 200773446 - MGP_CBAJ_P0059570 Rgs19 protein_coding protein_coding MGP_CBAJ_T0059571.1 MGP_CBAJ_G0026727.1 mouse_genomes_project 2 200772367 200777866 - MGP_CBAJ_P0059571 Rgs19 protein_coding protein_coding MGP_CBAJ_T0059572.1 MGP_CBAJ_G0026727.1 mouse_genomes_project 2 200772449 200775763 - MGP_CBAJ_P0059572 Rgs19 protein_coding protein_coding MGP_CBAJ_T0059573.1 MGP_CBAJ_G0026727.1 mouse_genomes_project 2 200772452 200777876 - MGP_CBAJ_P0059573 Rgs19 protein_coding protein_coding MGP_CBAJ_T0059574.1 MGP_CBAJ_G0026727.1 mouse_genomes_project 2 200773280 200777577 - Rgs19 protein_coding processed_transcript MGP_CBAJ_T0059575.1 MGP_CBAJ_G0026727.1 mouse_genomes_project 2 200773365 200777895 - Rgs19 protein_coding processed_transcript MGP_CBAJ_T0059576.1 MGP_CBAJ_G0026727.1 mouse_genomes_project 2 200773607 200777853 - Rgs19 protein_coding processed_transcript MGP_CBAJ_T0055329.1 MGP_CBAJ_G0025628.1 mouse_genomes_project 2 91492300 91495480 + MGP_CBAJ_P0055329 Prg2 protein_coding protein_coding MGP_CBAJ_T0059526.1 MGP_CBAJ_G0026721.1 mouse_genomes_project 2 200622674 200623913 - MGP_CBAJ_P0059526 Uckl1 protein_coding protein_coding MGP_CBAJ_T0059527.1 MGP_CBAJ_G0026721.1 mouse_genomes_project 2 200622677 200623323 - Uckl1 protein_coding retained_intron MGP_CBAJ_T0059528.1 MGP_CBAJ_G0026721.1 mouse_genomes_project 2 200622688 200635394 - MGP_CBAJ_P0059528 Uckl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059529.1 MGP_CBAJ_G0026721.1 mouse_genomes_project 2 200622690 200623407 - Uckl1 protein_coding retained_intron MGP_CBAJ_T0059530.1 MGP_CBAJ_G0026721.1 mouse_genomes_project 2 200622756 200626066 - Uckl1 protein_coding retained_intron MGP_CBAJ_T0059531.1 MGP_CBAJ_G0026721.1 mouse_genomes_project 2 200622836 200635390 - MGP_CBAJ_P0059531 Uckl1 protein_coding protein_coding MGP_CBAJ_T0059532.1 MGP_CBAJ_G0026721.1 mouse_genomes_project 2 200623139 200626653 - MGP_CBAJ_P0059532 Uckl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059533.1 MGP_CBAJ_G0026721.1 mouse_genomes_project 2 200623178 200626653 - Uckl1 protein_coding retained_intron MGP_CBAJ_T0059534.1 MGP_CBAJ_G0026721.1 mouse_genomes_project 2 200623289 200624901 - Uckl1 protein_coding retained_intron MGP_CBAJ_T0059535.1 MGP_CBAJ_G0026721.1 mouse_genomes_project 2 200623375 200626662 - Uckl1 protein_coding retained_intron MGP_CBAJ_T0059536.1 MGP_CBAJ_G0026721.1 mouse_genomes_project 2 200623531 200628002 - Uckl1 protein_coding processed_transcript MGP_CBAJ_T0059537.1 MGP_CBAJ_G0026721.1 mouse_genomes_project 2 200623886 200625684 - Uckl1 protein_coding processed_transcript MGP_CBAJ_T0059538.1 MGP_CBAJ_G0026721.1 mouse_genomes_project 2 200625850 200628026 - Uckl1 protein_coding retained_intron MGP_CBAJ_T0059539.1 MGP_CBAJ_G0026721.1 mouse_genomes_project 2 200626778 200638314 - MGP_CBAJ_P0059539 Uckl1 protein_coding protein_coding MGP_CBAJ_T0059540.1 MGP_CBAJ_G0026721.1 mouse_genomes_project 2 200626823 200628360 - Uckl1 protein_coding retained_intron MGP_CBAJ_T0059541.1 MGP_CBAJ_G0026721.1 mouse_genomes_project 2 200626834 200632477 - MGP_CBAJ_P0059541 Uckl1 protein_coding protein_coding MGP_CBAJ_T0059542.1 MGP_CBAJ_G0026721.1 mouse_genomes_project 2 200627810 200635400 - Uckl1 protein_coding retained_intron MGP_CBAJ_T0100378.1 MGP_CBAJ_G0038633.1 mouse_genomes_project 2 102931446 102931577 + Gm24318 snoRNA snoRNA MGP_CBAJ_T0100388.1 MGP_CBAJ_G0038643.1 mouse_genomes_project 2 122904112 122904241 + Gm22676 snoRNA snoRNA MGP_CBAJ_T0054741.1 MGP_CBAJ_G0025504.1 mouse_genomes_project 2 73241563 73278404 + MGP_CBAJ_P0054741 4932414N04Rik protein_coding protein_coding MGP_CBAJ_T0054742.1 MGP_CBAJ_G0025504.1 mouse_genomes_project 2 73242938 73331249 + MGP_CBAJ_P0054742 4932414N04Rik protein_coding protein_coding MGP_CBAJ_T0054743.1 MGP_CBAJ_G0025504.1 mouse_genomes_project 2 73242967 73259189 + 4932414N04Rik protein_coding processed_transcript MGP_CBAJ_T0054744.1 MGP_CBAJ_G0025504.1 mouse_genomes_project 2 73250241 73331247 + MGP_CBAJ_P0054744 4932414N04Rik protein_coding protein_coding MGP_CBAJ_T0054745.1 MGP_CBAJ_G0025504.1 mouse_genomes_project 2 73305303 73306302 + 4932414N04Rik protein_coding retained_intron MGP_CBAJ_T0055391.1 MGP_CBAJ_G0025667.1 mouse_genomes_project 2 92839437 92840382 - MGP_CBAJ_P0055391 Olfr1044 protein_coding protein_coding MGP_CBAJ_T0056238.1 MGP_CBAJ_G0025939.1 mouse_genomes_project 2 119895950 119906094 + MGP_CBAJ_P0056238 Lin7c protein_coding protein_coding MGP_CBAJ_T0056239.1 MGP_CBAJ_G0025939.1 mouse_genomes_project 2 119895967 119901830 + Lin7c protein_coding retained_intron MGP_CBAJ_T0001048.1 MGP_CBAJ_G0000980.1 mouse_genomes_project 2 73559746 73563112 + TEC TEC MGP_CBAJ_T0055372.1 MGP_CBAJ_G0025649.1 mouse_genomes_project 2 92423806 92424736 - MGP_CBAJ_P0055372 Olfr1016 protein_coding protein_coding MGP_CBAJ_T0101823.1 MGP_CBAJ_G0039854.1 mouse_genomes_project 2 116851351 116851544 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0056893.1 MGP_CBAJ_G0026099.1 mouse_genomes_project 2 133517093 133583125 + MGP_CBAJ_P0056893 Ctdspl2 protein_coding protein_coding MGP_CBAJ_T0056894.1 MGP_CBAJ_G0026099.1 mouse_genomes_project 2 133517508 133581874 + MGP_CBAJ_P0056894 Ctdspl2 protein_coding protein_coding MGP_CBAJ_T0056895.1 MGP_CBAJ_G0026099.1 mouse_genomes_project 2 133517557 133563866 + Ctdspl2 protein_coding retained_intron MGP_CBAJ_T0056896.1 MGP_CBAJ_G0026099.1 mouse_genomes_project 2 133517577 133582098 + Ctdspl2 protein_coding processed_transcript MGP_CBAJ_T0056897.1 MGP_CBAJ_G0026099.1 mouse_genomes_project 2 133517583 133563463 + Ctdspl2 protein_coding processed_transcript MGP_CBAJ_T0056898.1 MGP_CBAJ_G0026099.1 mouse_genomes_project 2 133517583 133559884 + Ctdspl2 protein_coding retained_intron MGP_CBAJ_T0056899.1 MGP_CBAJ_G0026099.1 mouse_genomes_project 2 133517756 133580213 + MGP_CBAJ_P0056899 Ctdspl2 protein_coding protein_coding MGP_CBAJ_T0056900.1 MGP_CBAJ_G0026099.1 mouse_genomes_project 2 133529791 133583074 + MGP_CBAJ_P0056900 Ctdspl2 protein_coding protein_coding MGP_CBAJ_T0056901.1 MGP_CBAJ_G0026099.1 mouse_genomes_project 2 133542353 133573477 + Ctdspl2 protein_coding retained_intron MGP_CBAJ_T0054135.1 MGP_CBAJ_G0025390.1 mouse_genomes_project 2 37945600 37946548 + MGP_CBAJ_P0054135 Olfr352 protein_coding protein_coding MGP_CBAJ_T0097808.1 MGP_CBAJ_G0036081.1 mouse_genomes_project 2 120621639 120621848 - pseudogene pseudogene MGP_CBAJ_T0004058.1 MGP_CBAJ_G0003587.1 mouse_genomes_project 2 171074652 171084590 - Acss2os antisense antisense MGP_CBAJ_T0053557.1 MGP_CBAJ_G0025292.1 mouse_genomes_project 2 31304104 31346112 + MGP_CBAJ_P0053557 Usp20 protein_coding protein_coding MGP_CBAJ_T0053558.1 MGP_CBAJ_G0025292.1 mouse_genomes_project 2 31304159 31306060 + Usp20 protein_coding retained_intron MGP_CBAJ_T0053559.1 MGP_CBAJ_G0025292.1 mouse_genomes_project 2 31304188 31330118 + MGP_CBAJ_P0053559 Usp20 protein_coding protein_coding MGP_CBAJ_T0053560.1 MGP_CBAJ_G0025292.1 mouse_genomes_project 2 31304222 31325473 + MGP_CBAJ_P0053560 Usp20 protein_coding protein_coding MGP_CBAJ_T0053561.1 MGP_CBAJ_G0025292.1 mouse_genomes_project 2 31304254 31322649 + MGP_CBAJ_P0053561 Usp20 protein_coding protein_coding MGP_CBAJ_T0053562.1 MGP_CBAJ_G0025292.1 mouse_genomes_project 2 31317470 31325142 + MGP_CBAJ_P0053562 Usp20 protein_coding protein_coding MGP_CBAJ_T0053563.1 MGP_CBAJ_G0025292.1 mouse_genomes_project 2 31317571 31325473 + MGP_CBAJ_P0053563 Usp20 protein_coding protein_coding MGP_CBAJ_T0053564.1 MGP_CBAJ_G0025292.1 mouse_genomes_project 2 31317857 31346108 + MGP_CBAJ_P0053564 Usp20 protein_coding protein_coding MGP_CBAJ_T0053565.1 MGP_CBAJ_G0025292.1 mouse_genomes_project 2 31317863 31328919 + Usp20 protein_coding processed_transcript MGP_CBAJ_T0053566.1 MGP_CBAJ_G0025292.1 mouse_genomes_project 2 31321410 31328948 + MGP_CBAJ_P0053566 Usp20 protein_coding protein_coding MGP_CBAJ_T0053567.1 MGP_CBAJ_G0025292.1 mouse_genomes_project 2 31325084 31326250 + Usp20 protein_coding retained_intron MGP_CBAJ_T0053568.1 MGP_CBAJ_G0025292.1 mouse_genomes_project 2 31342344 31343907 + Usp20 protein_coding retained_intron MGP_CBAJ_T0013578.1 MGP_CBAJ_G0011690.1 mouse_genomes_project 2 143782871 143783489 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010307.1 MGP_CBAJ_G0008445.1 mouse_genomes_project 2 100419312 100419375 - Mir7000 miRNA miRNA MGP_CBAJ_T0003901.1 MGP_CBAJ_G0003478.1 mouse_genomes_project 2 61773301 61785359 + Gm13544 antisense antisense MGP_CBAJ_T0013580.1 MGP_CBAJ_G0011692.1 mouse_genomes_project 2 144154842 144155121 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017538.1 MGP_CBAJ_G0015176.1 mouse_genomes_project 2 91591906 91598017 - processed_transcript processed_transcript MGP_CBAJ_T0101799.1 MGP_CBAJ_G0039830.1 mouse_genomes_project 2 92895440 92896384 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013237.1 MGP_CBAJ_G0011349.1 mouse_genomes_project 2 3530949 3535408 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098024.1 MGP_CBAJ_G0036297.1 mouse_genomes_project 2 133444255 133444369 - Gm23983 rRNA rRNA MGP_CBAJ_T0055495.1 MGP_CBAJ_G0025759.1 mouse_genomes_project 2 95806930 95807866 + MGP_CBAJ_P0055495 Olfr1184 protein_coding protein_coding MGP_CBAJ_T0013302.1 MGP_CBAJ_G0011414.1 mouse_genomes_project 2 32499836 32501242 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0059290.1 MGP_CBAJ_G0026676.1 mouse_genomes_project 2 198879718 198893715 - Psma7 protein_coding retained_intron MGP_CBAJ_T0059291.1 MGP_CBAJ_G0026676.1 mouse_genomes_project 2 198879718 198893753 - MGP_CBAJ_P0059291 Psma7 protein_coding protein_coding MGP_CBAJ_T0059292.1 MGP_CBAJ_G0026676.1 mouse_genomes_project 2 198888935 198890124 - Psma7 protein_coding retained_intron MGP_CBAJ_T0059293.1 MGP_CBAJ_G0026676.1 mouse_genomes_project 2 198889371 198891448 - Psma7 protein_coding retained_intron MGP_CBAJ_T0059294.1 MGP_CBAJ_G0026676.1 mouse_genomes_project 2 198890598 198893705 - Psma7 protein_coding processed_transcript MGP_CBAJ_T0052605.1 MGP_CBAJ_G0025128.1 mouse_genomes_project 2 24359351 24360333 - MGP_CBAJ_P0052605 Mrpl41 protein_coding protein_coding MGP_CBAJ_T0052606.1 MGP_CBAJ_G0025128.1 mouse_genomes_project 2 24359729 24360224 - MGP_CBAJ_P0052606 Mrpl41 protein_coding protein_coding MGP_CBAJ_T0054600.1 MGP_CBAJ_G0025478.1 mouse_genomes_project 2 65581823 65681503 + MGP_CBAJ_P0054600 Psmd14 protein_coding protein_coding MGP_CBAJ_T0054601.1 MGP_CBAJ_G0025478.1 mouse_genomes_project 2 65581871 65592733 + Psmd14 protein_coding processed_transcript MGP_CBAJ_T0054602.1 MGP_CBAJ_G0025478.1 mouse_genomes_project 2 65581889 65641175 + Psmd14 protein_coding processed_transcript MGP_CBAJ_T0054603.1 MGP_CBAJ_G0025478.1 mouse_genomes_project 2 65581909 65600042 + Psmd14 protein_coding processed_transcript MGP_CBAJ_T0054604.1 MGP_CBAJ_G0025478.1 mouse_genomes_project 2 65581920 65637647 + Psmd14 protein_coding processed_transcript MGP_CBAJ_T0054605.1 MGP_CBAJ_G0025478.1 mouse_genomes_project 2 65585952 65625192 + Psmd14 protein_coding processed_transcript MGP_CBAJ_T0054606.1 MGP_CBAJ_G0025478.1 mouse_genomes_project 2 65641652 65681180 + Psmd14 protein_coding processed_transcript MGP_CBAJ_T0054607.1 MGP_CBAJ_G0025478.1 mouse_genomes_project 2 65653471 65681201 + Psmd14 protein_coding processed_transcript MGP_CBAJ_T0055576.1 MGP_CBAJ_G0025820.1 mouse_genomes_project 2 97675704 97676613 - MGP_CBAJ_P0055576 Olfr140 protein_coding protein_coding MGP_CBAJ_T0055577.1 MGP_CBAJ_G0025820.1 mouse_genomes_project 2 97675704 97688414 - MGP_CBAJ_P0055577 Olfr140 protein_coding protein_coding MGP_CBAJ_T0013383.1 MGP_CBAJ_G0011495.1 mouse_genomes_project 2 62971001 62971797 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101792.1 MGP_CBAJ_G0039823.1 mouse_genomes_project 2 92186187 92187117 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0054642.1 MGP_CBAJ_G0025485.1 mouse_genomes_project 2 66629401 66663934 + MGP_CBAJ_P0054642 Gca protein_coding protein_coding MGP_CBAJ_T0054643.1 MGP_CBAJ_G0025485.1 mouse_genomes_project 2 66652730 66658505 + Gca protein_coding processed_transcript MGP_CBAJ_T0058126.1 MGP_CBAJ_G0026418.1 mouse_genomes_project 2 170043228 170105353 + Chmp4b protein_coding processed_transcript MGP_CBAJ_T0058127.1 MGP_CBAJ_G0026418.1 mouse_genomes_project 2 170054089 170105358 + MGP_CBAJ_P0058127 Chmp4b protein_coding protein_coding MGP_CBAJ_T0058128.1 MGP_CBAJ_G0026418.1 mouse_genomes_project 2 170098526 170104854 + Chmp4b protein_coding retained_intron MGP_CBAJ_T0052081.1 MGP_CBAJ_G0025041.1 mouse_genomes_project 2 3490803 3528945 - MGP_CBAJ_P0052081 Proser2 protein_coding protein_coding MGP_CBAJ_T0052082.1 MGP_CBAJ_G0025041.1 mouse_genomes_project 2 3493222 3528880 - MGP_CBAJ_P0052082 Proser2 protein_coding protein_coding MGP_CBAJ_T0052083.1 MGP_CBAJ_G0025041.1 mouse_genomes_project 2 3497070 3528873 - MGP_CBAJ_P0052083 Proser2 protein_coding protein_coding MGP_CBAJ_T0052084.1 MGP_CBAJ_G0025041.1 mouse_genomes_project 2 3523540 3528915 - Proser2 protein_coding processed_transcript MGP_CBAJ_T0013611.1 MGP_CBAJ_G0011723.1 mouse_genomes_project 2 158362452 158362760 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011360.1 MGP_CBAJ_G0009498.1 mouse_genomes_project 2 11477916 11478103 + Gm27540 misc_RNA misc_RNA MGP_CBAJ_T0013698.1 MGP_CBAJ_G0011810.1 mouse_genomes_project 2 198827808 198828217 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013487.1 MGP_CBAJ_G0011599.1 mouse_genomes_project 2 100337335 100338025 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011389.1 MGP_CBAJ_G0009527.1 mouse_genomes_project 2 161646839 161647163 - Gm22261 misc_RNA misc_RNA MGP_CBAJ_T0056866.1 MGP_CBAJ_G0026093.1 mouse_genomes_project 2 132907215 132922660 - MGP_CBAJ_P0056866 unknown_likely_coding unknown_likely_coding MGP_CBAJ_T0013553.1 MGP_CBAJ_G0011665.1 mouse_genomes_project 2 129716864 129717349 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010366.1 MGP_CBAJ_G0008504.1 mouse_genomes_project 2 199157290 199157366 + Mir3091 miRNA miRNA MGP_CBAJ_T0059060.1 MGP_CBAJ_G0026612.1 mouse_genomes_project 2 185018820 185037735 - MGP_CBAJ_P0059060 Tmem189 protein_coding protein_coding MGP_CBAJ_T0059061.1 MGP_CBAJ_G0026612.1 mouse_genomes_project 2 185019444 185076007 - Tmem189 protein_coding processed_transcript MGP_CBAJ_T0059062.1 MGP_CBAJ_G0026612.1 mouse_genomes_project 2 185019952 185021368 - Tmem189 protein_coding retained_intron MGP_CBAJ_T0059063.1 MGP_CBAJ_G0026612.1 mouse_genomes_project 2 185030375 185037733 - Tmem189 protein_coding retained_intron MGP_CBAJ_T0057257.1 MGP_CBAJ_G0026193.1 mouse_genomes_project 2 142783078 142833703 + Tgm6 protein_coding processed_transcript MGP_CBAJ_T0057258.1 MGP_CBAJ_G0026193.1 mouse_genomes_project 2 142796756 142833703 + Tgm6 protein_coding processed_transcript MGP_CBAJ_T0057259.1 MGP_CBAJ_G0026193.1 mouse_genomes_project 2 142796756 142833703 + MGP_CBAJ_P0057259 Tgm6 protein_coding protein_coding MGP_CBAJ_T0017473.1 MGP_CBAJ_G0015134.1 mouse_genomes_project 2 8231380 8269772 - Gm13261 processed_transcript processed_transcript MGP_CBAJ_T0057603.1 MGP_CBAJ_G0026268.1 mouse_genomes_project 2 153865834 153903279 + MGP_CBAJ_P0057603 Ndufaf5 protein_coding protein_coding MGP_CBAJ_T0057604.1 MGP_CBAJ_G0026268.1 mouse_genomes_project 2 153865898 153867500 + Ndufaf5 protein_coding retained_intron MGP_CBAJ_T0057605.1 MGP_CBAJ_G0026268.1 mouse_genomes_project 2 153866215 153903222 + Ndufaf5 protein_coding processed_transcript MGP_CBAJ_T0056403.1 MGP_CBAJ_G0026007.1 mouse_genomes_project 2 129175593 129190846 + MGP_CBAJ_P0056403 Thbs1 protein_coding protein_coding MGP_CBAJ_T0056404.1 MGP_CBAJ_G0026007.1 mouse_genomes_project 2 129186655 129187480 + Thbs1 protein_coding processed_transcript MGP_CBAJ_T0003812.1 MGP_CBAJ_G0003409.1 mouse_genomes_project 2 1582526 1590763 - Gm13175 antisense antisense MGP_CBAJ_T0055578.1 MGP_CBAJ_G0025821.1 mouse_genomes_project 2 97726531 97727286 - MGP_CBAJ_P0055578 protein_coding protein_coding MGP_CBAJ_T0017635.1 MGP_CBAJ_G0015224.1 mouse_genomes_project 2 172294255 172298446 - Gm14169 processed_transcript processed_transcript MGP_CBAJ_T0010216.1 MGP_CBAJ_G0008354.1 mouse_genomes_project 2 8371156 8371253 + Mir669b miRNA miRNA MGP_CBAJ_T0053888.1 MGP_CBAJ_G0025340.1 mouse_genomes_project 2 33654337 33658353 + MGP_CBAJ_P0053888 Rpl12 protein_coding protein_coding MGP_CBAJ_T0053889.1 MGP_CBAJ_G0025340.1 mouse_genomes_project 2 33654498 33659202 + Rpl12 protein_coding retained_intron MGP_CBAJ_T0053890.1 MGP_CBAJ_G0025340.1 mouse_genomes_project 2 33654507 33657902 + Rpl12 protein_coding retained_intron MGP_CBAJ_T0053891.1 MGP_CBAJ_G0025340.1 mouse_genomes_project 2 33654510 33655717 + Rpl12 protein_coding retained_intron MGP_CBAJ_T0053892.1 MGP_CBAJ_G0025340.1 mouse_genomes_project 2 33654518 33657168 + Rpl12 protein_coding retained_intron MGP_CBAJ_T0053893.1 MGP_CBAJ_G0025340.1 mouse_genomes_project 2 33654518 33657900 + MGP_CBAJ_P0053893 Rpl12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053894.1 MGP_CBAJ_G0025340.1 mouse_genomes_project 2 33655044 33655845 + Rpl12 protein_coding retained_intron MGP_CBAJ_T0059599.1 MGP_CBAJ_G0026731.1 mouse_genomes_project 2 200948699 200970179 + MGP_CBAJ_P0059599 Pcmtd2 protein_coding protein_coding MGP_CBAJ_T0059600.1 MGP_CBAJ_G0026731.1 mouse_genomes_project 2 200948758 200970164 + MGP_CBAJ_P0059600 Pcmtd2 protein_coding protein_coding MGP_CBAJ_T0059601.1 MGP_CBAJ_G0026731.1 mouse_genomes_project 2 200953834 200959608 + MGP_CBAJ_P0059601 Pcmtd2 protein_coding protein_coding MGP_CBAJ_T0059602.1 MGP_CBAJ_G0026731.1 mouse_genomes_project 2 200955455 200959662 + Pcmtd2 protein_coding retained_intron MGP_CBAJ_T0059603.1 MGP_CBAJ_G0026731.1 mouse_genomes_project 2 200957450 200968056 + MGP_CBAJ_P0059603 Pcmtd2 protein_coding protein_coding MGP_CBAJ_T0059604.1 MGP_CBAJ_G0026731.1 mouse_genomes_project 2 200963675 200968320 + Pcmtd2 protein_coding processed_transcript MGP_CBAJ_T0059605.1 MGP_CBAJ_G0026731.1 mouse_genomes_project 2 200963683 200968195 + Pcmtd2 protein_coding processed_transcript MGP_CBAJ_T0059606.1 MGP_CBAJ_G0026731.1 mouse_genomes_project 2 200963717 200967973 + Pcmtd2 protein_coding processed_transcript MGP_CBAJ_T0059607.1 MGP_CBAJ_G0026731.1 mouse_genomes_project 2 200964280 200968223 + Pcmtd2 protein_coding retained_intron MGP_CBAJ_T0057033.1 MGP_CBAJ_G0026138.1 mouse_genomes_project 2 138541108 138742226 - MGP_CBAJ_P0057033 Atp8b4 protein_coding protein_coding MGP_CBAJ_T0057034.1 MGP_CBAJ_G0026138.1 mouse_genomes_project 2 138542639 138733783 - MGP_CBAJ_P0057034 Atp8b4 protein_coding protein_coding MGP_CBAJ_T0057035.1 MGP_CBAJ_G0026138.1 mouse_genomes_project 2 138597230 138733763 - Atp8b4 protein_coding retained_intron MGP_CBAJ_T0057036.1 MGP_CBAJ_G0026138.1 mouse_genomes_project 2 138597274 138742368 - MGP_CBAJ_P0057036 Atp8b4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057037.1 MGP_CBAJ_G0026138.1 mouse_genomes_project 2 138621357 138743053 - MGP_CBAJ_P0057037 Atp8b4 protein_coding protein_coding MGP_CBAJ_T0013380.1 MGP_CBAJ_G0011492.1 mouse_genomes_project 2 62528234 62531422 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055360.1 MGP_CBAJ_G0025637.1 mouse_genomes_project 2 91945826 91946756 - MGP_CBAJ_P0055360 Olfr992 protein_coding protein_coding MGP_CBAJ_T0007116.1 MGP_CBAJ_G0005831.1 mouse_genomes_project 2 71623279 71639090 + Gm1322 lincRNA lincRNA MGP_CBAJ_T0059123.1 MGP_CBAJ_G0026625.1 mouse_genomes_project 2 186525068 186605728 - MGP_CBAJ_P0059123 Zfp64 protein_coding protein_coding MGP_CBAJ_T0059124.1 MGP_CBAJ_G0026625.1 mouse_genomes_project 2 186541736 186551250 - MGP_CBAJ_P0059124 Zfp64 protein_coding protein_coding MGP_CBAJ_T0059125.1 MGP_CBAJ_G0026625.1 mouse_genomes_project 2 186566957 186605413 - MGP_CBAJ_P0059125 Zfp64 protein_coding protein_coding MGP_CBAJ_T0059126.1 MGP_CBAJ_G0026625.1 mouse_genomes_project 2 186576709 186605430 - MGP_CBAJ_P0059126 Zfp64 protein_coding protein_coding MGP_CBAJ_T0059127.1 MGP_CBAJ_G0026625.1 mouse_genomes_project 2 186600632 186605407 - Zfp64 protein_coding retained_intron MGP_CBAJ_T0017562.1 MGP_CBAJ_G0015190.1 mouse_genomes_project 2 102196173 102199715 + Alkbh3os1 processed_transcript processed_transcript MGP_CBAJ_T0011381.1 MGP_CBAJ_G0009519.1 mouse_genomes_project 2 114603622 114603855 - Gm27308 misc_RNA misc_RNA MGP_CBAJ_T0004013.1 MGP_CBAJ_G0003553.1 mouse_genomes_project 2 143977996 143989801 + Gm14232 antisense antisense MGP_CBAJ_T0013625.1 MGP_CBAJ_G0011737.1 mouse_genomes_project 2 162096925 162097255 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0003896.1 MGP_CBAJ_G0003475.1 mouse_genomes_project 2 47222473 47227115 + Zeb2os antisense antisense MGP_CBAJ_T0003897.1 MGP_CBAJ_G0003475.1 mouse_genomes_project 2 47223600 47227115 + Zeb2os antisense antisense MGP_CBAJ_T0059561.1 MGP_CBAJ_G0026726.1 mouse_genomes_project 2 200764255 200771293 + Tcea2 protein_coding retained_intron MGP_CBAJ_T0059562.1 MGP_CBAJ_G0026726.1 mouse_genomes_project 2 200764255 200772017 + MGP_CBAJ_P0059562 Tcea2 protein_coding protein_coding MGP_CBAJ_T0059563.1 MGP_CBAJ_G0026726.1 mouse_genomes_project 2 200765135 200771997 + MGP_CBAJ_P0059563 Tcea2 protein_coding protein_coding MGP_CBAJ_T0059564.1 MGP_CBAJ_G0026726.1 mouse_genomes_project 2 200766830 200771991 + MGP_CBAJ_P0059564 Tcea2 protein_coding protein_coding MGP_CBAJ_T0059565.1 MGP_CBAJ_G0026726.1 mouse_genomes_project 2 200767111 200770238 + Tcea2 protein_coding processed_transcript MGP_CBAJ_T0059566.1 MGP_CBAJ_G0026726.1 mouse_genomes_project 2 200767520 200771857 + Tcea2 protein_coding retained_intron MGP_CBAJ_T0059567.1 MGP_CBAJ_G0026726.1 mouse_genomes_project 2 200767546 200770880 + Tcea2 protein_coding retained_intron MGP_CBAJ_T0059568.1 MGP_CBAJ_G0026726.1 mouse_genomes_project 2 200771461 200772008 + Tcea2 protein_coding processed_transcript MGP_CBAJ_T0056015.1 MGP_CBAJ_G0025897.1 mouse_genomes_project 2 111808499 111947587 + MGP_CBAJ_P0056015 Slc1a2 protein_coding protein_coding MGP_CBAJ_T0056016.1 MGP_CBAJ_G0025897.1 mouse_genomes_project 2 111809063 111890413 + Slc1a2 protein_coding processed_transcript MGP_CBAJ_T0056017.1 MGP_CBAJ_G0025897.1 mouse_genomes_project 2 111809098 111890410 + Slc1a2 protein_coding processed_transcript MGP_CBAJ_T0056018.1 MGP_CBAJ_G0025897.1 mouse_genomes_project 2 111809121 111932533 + MGP_CBAJ_P0056018 Slc1a2 protein_coding protein_coding MGP_CBAJ_T0056019.1 MGP_CBAJ_G0025897.1 mouse_genomes_project 2 111825285 111890410 + Slc1a2 protein_coding processed_transcript MGP_CBAJ_T0056020.1 MGP_CBAJ_G0025897.1 mouse_genomes_project 2 111860819 111894327 + MGP_CBAJ_P0056020 Slc1a2 protein_coding protein_coding MGP_CBAJ_T0056021.1 MGP_CBAJ_G0025897.1 mouse_genomes_project 2 111860901 111936169 + MGP_CBAJ_P0056021 Slc1a2 protein_coding protein_coding MGP_CBAJ_T0056022.1 MGP_CBAJ_G0025897.1 mouse_genomes_project 2 111860901 111932542 + MGP_CBAJ_P0056022 Slc1a2 protein_coding protein_coding MGP_CBAJ_T0056023.1 MGP_CBAJ_G0025897.1 mouse_genomes_project 2 111873433 111890406 + Slc1a2 protein_coding processed_transcript MGP_CBAJ_T0056024.1 MGP_CBAJ_G0025897.1 mouse_genomes_project 2 111910354 111932020 + MGP_CBAJ_P0056024 Slc1a2 protein_coding protein_coding MGP_CBAJ_T0056025.1 MGP_CBAJ_G0025897.1 mouse_genomes_project 2 111915617 111935983 + MGP_CBAJ_P0056025 Slc1a2 protein_coding protein_coding MGP_CBAJ_T0055036.1 MGP_CBAJ_G0025563.1 mouse_genomes_project 2 80074078 80076276 + MGP_CBAJ_P0055036 Hoxd8 protein_coding protein_coding MGP_CBAJ_T0055037.1 MGP_CBAJ_G0025563.1 mouse_genomes_project 2 80074368 80077397 + MGP_CBAJ_P0055037 Hoxd8 protein_coding protein_coding MGP_CBAJ_T0055038.1 MGP_CBAJ_G0025563.1 mouse_genomes_project 2 80074615 80076771 + MGP_CBAJ_P0055038 Hoxd8 protein_coding protein_coding MGP_CBAJ_T0013573.1 MGP_CBAJ_G0011685.1 mouse_genomes_project 2 142391276 142392907 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055503.1 MGP_CBAJ_G0025766.1 mouse_genomes_project 2 96137005 96137462 - MGP_CBAJ_P0055503 protein_coding protein_coding MGP_CBAJ_T0003834.1 MGP_CBAJ_G0003427.1 mouse_genomes_project 2 18616125 18619078 - Gm13348 antisense antisense MGP_CBAJ_T0013620.1 MGP_CBAJ_G0011732.1 mouse_genomes_project 2 161225905 161226507 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0051939.1 MGP_CBAJ_G0025015.1 mouse_genomes_project 2 264604 310579 + MGP_CBAJ_P0051939 Nmt2 protein_coding protein_coding MGP_CBAJ_T0051940.1 MGP_CBAJ_G0025015.1 mouse_genomes_project 2 264649 308427 + MGP_CBAJ_P0051940 Nmt2 protein_coding protein_coding MGP_CBAJ_T0051941.1 MGP_CBAJ_G0025015.1 mouse_genomes_project 2 264660 307909 + MGP_CBAJ_P0051941 Nmt2 protein_coding protein_coding MGP_CBAJ_T0051942.1 MGP_CBAJ_G0025015.1 mouse_genomes_project 2 264673 288830 + Nmt2 protein_coding processed_transcript MGP_CBAJ_T0003873.1 MGP_CBAJ_G0003456.1 mouse_genomes_project 2 32465060 32465906 - Gm13442 antisense antisense MGP_CBAJ_T0099126.1 MGP_CBAJ_G0037381.1 mouse_genomes_project 2 138289236 138289331 - Gm26496 snRNA snRNA MGP_CBAJ_T0054139.1 MGP_CBAJ_G0025394.1 mouse_genomes_project 2 38022472 38023420 + MGP_CBAJ_P0054139 Olfr356 protein_coding protein_coding MGP_CBAJ_T0059076.1 MGP_CBAJ_G0026616.1 mouse_genomes_project 2 185559792 185579990 + MGP_CBAJ_P0059076 Pard6b protein_coding protein_coding MGP_CBAJ_T0058266.1 MGP_CBAJ_G0026445.1 mouse_genomes_project 2 171531965 171570936 + Cep250 protein_coding retained_intron MGP_CBAJ_T0058267.1 MGP_CBAJ_G0026445.1 mouse_genomes_project 2 171532070 171582828 + MGP_CBAJ_P0058267 Cep250 protein_coding protein_coding MGP_CBAJ_T0058268.1 MGP_CBAJ_G0026445.1 mouse_genomes_project 2 171532070 171582828 + MGP_CBAJ_P0058268 Cep250 protein_coding protein_coding MGP_CBAJ_T0058269.1 MGP_CBAJ_G0026445.1 mouse_genomes_project 2 171532070 171582828 + MGP_CBAJ_P0058269 Cep250 protein_coding protein_coding MGP_CBAJ_T0058270.1 MGP_CBAJ_G0026445.1 mouse_genomes_project 2 171532084 171558803 + MGP_CBAJ_P0058270 Cep250 protein_coding protein_coding MGP_CBAJ_T0058271.1 MGP_CBAJ_G0026445.1 mouse_genomes_project 2 171532106 171550400 + MGP_CBAJ_P0058271 Cep250 protein_coding protein_coding MGP_CBAJ_T0058273.1 MGP_CBAJ_G0026445.1 mouse_genomes_project 2 171560737 171588888 + Cep250 protein_coding retained_intron MGP_CBAJ_T0058274.1 MGP_CBAJ_G0026445.1 mouse_genomes_project 2 171563895 171565783 + Cep250 protein_coding retained_intron MGP_CBAJ_T0058275.1 MGP_CBAJ_G0026445.1 mouse_genomes_project 2 171570205 171573902 + MGP_CBAJ_P0058275 Cep250 protein_coding protein_coding MGP_CBAJ_T0058276.1 MGP_CBAJ_G0026445.1 mouse_genomes_project 2 171570237 171574895 + MGP_CBAJ_P0058276 Cep250 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053378.1 MGP_CBAJ_G0025265.1 mouse_genomes_project 2 30221318 30223394 - Zdhhc12 protein_coding processed_transcript MGP_CBAJ_T0053379.1 MGP_CBAJ_G0025265.1 mouse_genomes_project 2 30221318 30224023 - MGP_CBAJ_P0053379 Zdhhc12 protein_coding protein_coding MGP_CBAJ_T0053380.1 MGP_CBAJ_G0025265.1 mouse_genomes_project 2 30221325 30224010 - MGP_CBAJ_P0053380 Zdhhc12 protein_coding protein_coding MGP_CBAJ_T0053381.1 MGP_CBAJ_G0025265.1 mouse_genomes_project 2 30221705 30223991 - Zdhhc12 protein_coding retained_intron MGP_CBAJ_T0010263.1 MGP_CBAJ_G0008401.1 mouse_genomes_project 2 27211557 27211639 - Mir7578 miRNA miRNA MGP_CBAJ_T0058373.1 MGP_CBAJ_G0026456.1 mouse_genomes_project 2 171819853 171880865 + MGP_CBAJ_P0058373 Phf20 protein_coding protein_coding MGP_CBAJ_T0058374.1 MGP_CBAJ_G0026456.1 mouse_genomes_project 2 171820029 171945760 + MGP_CBAJ_P0058374 Phf20 protein_coding protein_coding MGP_CBAJ_T0058375.1 MGP_CBAJ_G0026456.1 mouse_genomes_project 2 171820121 171945758 + Phf20 protein_coding processed_transcript MGP_CBAJ_T0058376.1 MGP_CBAJ_G0026456.1 mouse_genomes_project 2 171820141 171848851 + Phf20 protein_coding retained_intron MGP_CBAJ_T0058377.1 MGP_CBAJ_G0026456.1 mouse_genomes_project 2 171820143 171881067 + Phf20 protein_coding retained_intron MGP_CBAJ_T0058378.1 MGP_CBAJ_G0026456.1 mouse_genomes_project 2 171847816 171878380 + Phf20 protein_coding processed_transcript MGP_CBAJ_T0058379.1 MGP_CBAJ_G0026456.1 mouse_genomes_project 2 171889724 171902699 + Phf20 protein_coding processed_transcript MGP_CBAJ_T0058380.1 MGP_CBAJ_G0026456.1 mouse_genomes_project 2 171911881 171921693 + Phf20 protein_coding processed_transcript MGP_CBAJ_T0058381.1 MGP_CBAJ_G0026456.1 mouse_genomes_project 2 171922913 171927773 + Phf20 protein_coding retained_intron MGP_CBAJ_T0058382.1 MGP_CBAJ_G0026456.1 mouse_genomes_project 2 171925197 171927865 + Phf20 protein_coding processed_transcript MGP_CBAJ_T0054561.1 MGP_CBAJ_G0025472.1 mouse_genomes_project 2 63938408 63979546 - MGP_CBAJ_P0054561 Cd302 protein_coding protein_coding MGP_CBAJ_T0054562.1 MGP_CBAJ_G0025472.1 mouse_genomes_project 2 63938408 63979476 - MGP_CBAJ_P0054562 Cd302 protein_coding protein_coding MGP_CBAJ_T0007122.1 MGP_CBAJ_G0005837.1 mouse_genomes_project 2 77846090 77883938 + 8430437L04Rik lincRNA lincRNA MGP_CBAJ_T0003938.1 MGP_CBAJ_G0003504.1 mouse_genomes_project 2 78844222 78848599 + Chrna1os antisense antisense MGP_CBAJ_T0003939.1 MGP_CBAJ_G0003504.1 mouse_genomes_project 2 78844232 78848620 + Chrna1os antisense antisense MGP_CBAJ_T0055726.1 MGP_CBAJ_G0025846.1 mouse_genomes_project 2 99091102 99096714 + MGP_CBAJ_P0055726 Pacsin3 protein_coding protein_coding MGP_CBAJ_T0055727.1 MGP_CBAJ_G0025846.1 mouse_genomes_project 2 99091263 99092277 + Pacsin3 protein_coding retained_intron MGP_CBAJ_T0055728.1 MGP_CBAJ_G0025846.1 mouse_genomes_project 2 99091292 99095686 + MGP_CBAJ_P0055728 Pacsin3 protein_coding protein_coding MGP_CBAJ_T0055729.1 MGP_CBAJ_G0025846.1 mouse_genomes_project 2 99091310 99099802 + MGP_CBAJ_P0055729 Pacsin3 protein_coding protein_coding MGP_CBAJ_T0055730.1 MGP_CBAJ_G0025846.1 mouse_genomes_project 2 99091961 99096391 + MGP_CBAJ_P0055730 Pacsin3 protein_coding protein_coding MGP_CBAJ_T0055731.1 MGP_CBAJ_G0025846.1 mouse_genomes_project 2 99091961 99099801 + MGP_CBAJ_P0055731 Pacsin3 protein_coding protein_coding MGP_CBAJ_T0055732.1 MGP_CBAJ_G0025846.1 mouse_genomes_project 2 99091961 99099802 + MGP_CBAJ_P0055732 Pacsin3 protein_coding protein_coding MGP_CBAJ_T0055733.1 MGP_CBAJ_G0025846.1 mouse_genomes_project 2 99091986 99096480 + MGP_CBAJ_P0055733 Pacsin3 protein_coding protein_coding MGP_CBAJ_T0055734.1 MGP_CBAJ_G0025846.1 mouse_genomes_project 2 99092477 99099802 + MGP_CBAJ_P0055734 Pacsin3 protein_coding protein_coding MGP_CBAJ_T0055735.1 MGP_CBAJ_G0025846.1 mouse_genomes_project 2 99092483 99096446 + MGP_CBAJ_P0055735 Pacsin3 protein_coding protein_coding MGP_CBAJ_T0055736.1 MGP_CBAJ_G0025846.1 mouse_genomes_project 2 99094350 99095374 + Pacsin3 protein_coding processed_transcript MGP_CBAJ_T0055737.1 MGP_CBAJ_G0025846.1 mouse_genomes_project 2 99094973 99096743 + MGP_CBAJ_P0055737 Pacsin3 protein_coding protein_coding MGP_CBAJ_T0055738.1 MGP_CBAJ_G0025846.1 mouse_genomes_project 2 99095949 99096814 + Pacsin3 protein_coding retained_intron MGP_CBAJ_T0055739.1 MGP_CBAJ_G0025846.1 mouse_genomes_project 2 99098035 99098656 + Pacsin3 protein_coding retained_intron MGP_CBAJ_T0055740.1 MGP_CBAJ_G0025846.1 mouse_genomes_project 2 99098228 99099482 + MGP_CBAJ_P0055740 Pacsin3 protein_coding protein_coding MGP_CBAJ_T0013339.1 MGP_CBAJ_G0011451.1 mouse_genomes_project 2 47466190 47466424 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055376.1 MGP_CBAJ_G0025653.1 mouse_genomes_project 2 92503368 92504316 + MGP_CBAJ_P0055376 Olfr1022 protein_coding protein_coding MGP_CBAJ_T0100371.1 MGP_CBAJ_G0038626.1 mouse_genomes_project 2 69629547 69629661 - Gm24138 snoRNA snoRNA MGP_CBAJ_T0058496.1 MGP_CBAJ_G0026477.1 mouse_genomes_project 2 173423812 173433690 - MGP_CBAJ_P0058496 Blcap protein_coding protein_coding MGP_CBAJ_T0058497.1 MGP_CBAJ_G0026477.1 mouse_genomes_project 2 173423812 173433666 - MGP_CBAJ_P0058497 Blcap protein_coding protein_coding MGP_CBAJ_T0058498.1 MGP_CBAJ_G0026477.1 mouse_genomes_project 2 173425550 173445021 - MGP_CBAJ_P0058498 Blcap protein_coding protein_coding MGP_CBAJ_T0058499.1 MGP_CBAJ_G0026477.1 mouse_genomes_project 2 173425636 173427456 - Blcap protein_coding processed_transcript MGP_CBAJ_T0058510.1 MGP_CBAJ_G0026477.1 mouse_genomes_project 2 173432919 173433660 - Blcap protein_coding processed_transcript MGP_CBAJ_T0058511.1 MGP_CBAJ_G0026477.1 mouse_genomes_project 2 173434203 173445021 - Blcap protein_coding processed_transcript MGP_CBAJ_T0054917.1 MGP_CBAJ_G0025539.1 mouse_genomes_project 2 76777376 76865557 + Itga6 protein_coding processed_transcript MGP_CBAJ_T0054918.1 MGP_CBAJ_G0025539.1 mouse_genomes_project 2 76830278 76866246 + Itga6 protein_coding processed_transcript MGP_CBAJ_T0054919.1 MGP_CBAJ_G0025539.1 mouse_genomes_project 2 76830289 76903945 + MGP_CBAJ_P0054919 Itga6 protein_coding protein_coding MGP_CBAJ_T0054920.1 MGP_CBAJ_G0025539.1 mouse_genomes_project 2 76830488 76905407 + MGP_CBAJ_P0054920 Itga6 protein_coding protein_coding MGP_CBAJ_T0054921.1 MGP_CBAJ_G0025539.1 mouse_genomes_project 2 76885233 76886067 + Itga6 protein_coding processed_transcript MGP_CBAJ_T0054922.1 MGP_CBAJ_G0025539.1 mouse_genomes_project 2 76896181 76905590 + Itga6 protein_coding processed_transcript MGP_CBAJ_T0058709.1 MGP_CBAJ_G0026523.1 mouse_genomes_project 2 180299296 180322946 - MGP_CBAJ_P0058709 Ada protein_coding protein_coding MGP_CBAJ_T0058710.1 MGP_CBAJ_G0026523.1 mouse_genomes_project 2 180302725 180303577 - Ada protein_coding processed_transcript MGP_CBAJ_T0013571.1 MGP_CBAJ_G0011683.1 mouse_genomes_project 2 141509800 141510279 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013534.1 MGP_CBAJ_G0011646.1 mouse_genomes_project 2 118443875 118444135 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0059173.1 MGP_CBAJ_G0026645.1 mouse_genomes_project 2 191278052 191293957 + Spo11 protein_coding retained_intron MGP_CBAJ_T0059174.1 MGP_CBAJ_G0026645.1 mouse_genomes_project 2 191280164 191293951 + MGP_CBAJ_P0059174 Spo11 protein_coding protein_coding MGP_CBAJ_T0059175.1 MGP_CBAJ_G0026645.1 mouse_genomes_project 2 191280171 191293953 + MGP_CBAJ_P0059175 Spo11 protein_coding protein_coding MGP_CBAJ_T0059176.1 MGP_CBAJ_G0026645.1 mouse_genomes_project 2 191280171 191293962 + MGP_CBAJ_P0059176 Spo11 protein_coding protein_coding MGP_CBAJ_T0059177.1 MGP_CBAJ_G0026645.1 mouse_genomes_project 2 191286244 191292428 + Spo11 protein_coding processed_transcript MGP_CBAJ_T0013668.1 MGP_CBAJ_G0011780.1 mouse_genomes_project 2 177100537 177101395 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007045.1 MGP_CBAJ_G0005776.1 mouse_genomes_project 2 18297334 18305248 + lincRNA lincRNA MGP_CBAJ_T0007046.1 MGP_CBAJ_G0005776.1 mouse_genomes_project 2 18297855 18307090 + lincRNA lincRNA MGP_CBAJ_T0007047.1 MGP_CBAJ_G0005776.1 mouse_genomes_project 2 18297954 18304982 + lincRNA lincRNA MGP_CBAJ_T0013345.1 MGP_CBAJ_G0011457.1 mouse_genomes_project 2 50837711 50838025 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055439.1 MGP_CBAJ_G0025714.1 mouse_genomes_project 2 94405579 94406560 + MGP_CBAJ_P0055439 Olfr1122 protein_coding protein_coding MGP_CBAJ_T0058407.1 MGP_CBAJ_G0026461.1 mouse_genomes_project 2 172299239 172474920 + MGP_CBAJ_P0058407 Dlgap4 protein_coding protein_coding MGP_CBAJ_T0058408.1 MGP_CBAJ_G0026461.1 mouse_genomes_project 2 172299239 172474922 + MGP_CBAJ_P0058408 Dlgap4 protein_coding protein_coding MGP_CBAJ_T0058409.1 MGP_CBAJ_G0026461.1 mouse_genomes_project 2 172398169 172473738 + MGP_CBAJ_P0058409 Dlgap4 protein_coding protein_coding MGP_CBAJ_T0058410.1 MGP_CBAJ_G0026461.1 mouse_genomes_project 2 172398169 172473733 + MGP_CBAJ_P0058410 Dlgap4 protein_coding protein_coding MGP_CBAJ_T0058411.1 MGP_CBAJ_G0026461.1 mouse_genomes_project 2 172422151 172456761 + MGP_CBAJ_P0058411 Dlgap4 protein_coding protein_coding MGP_CBAJ_T0058412.1 MGP_CBAJ_G0026461.1 mouse_genomes_project 2 172422610 172473284 + MGP_CBAJ_P0058412 Dlgap4 protein_coding protein_coding MGP_CBAJ_T0058413.1 MGP_CBAJ_G0026461.1 mouse_genomes_project 2 172422624 172473683 + MGP_CBAJ_P0058413 Dlgap4 protein_coding protein_coding MGP_CBAJ_T0058414.1 MGP_CBAJ_G0026461.1 mouse_genomes_project 2 172422625 172473514 + Dlgap4 protein_coding retained_intron MGP_CBAJ_T0058415.1 MGP_CBAJ_G0026461.1 mouse_genomes_project 2 172422636 172457002 + MGP_CBAJ_P0058415 Dlgap4 protein_coding protein_coding MGP_CBAJ_T0058416.1 MGP_CBAJ_G0026461.1 mouse_genomes_project 2 172422639 172456839 + MGP_CBAJ_P0058416 Dlgap4 protein_coding protein_coding MGP_CBAJ_T0058417.1 MGP_CBAJ_G0026461.1 mouse_genomes_project 2 172422641 172473403 + MGP_CBAJ_P0058417 Dlgap4 protein_coding protein_coding MGP_CBAJ_T0058418.1 MGP_CBAJ_G0026461.1 mouse_genomes_project 2 172422649 172473462 + MGP_CBAJ_P0058418 Dlgap4 protein_coding protein_coding MGP_CBAJ_T0058419.1 MGP_CBAJ_G0026461.1 mouse_genomes_project 2 172423071 172474922 + MGP_CBAJ_P0058419 Dlgap4 protein_coding protein_coding MGP_CBAJ_T0058420.1 MGP_CBAJ_G0026461.1 mouse_genomes_project 2 172470486 172473338 + Dlgap4 protein_coding processed_transcript MGP_CBAJ_T0057807.1 MGP_CBAJ_G0026323.1 mouse_genomes_project 2 164832758 164854916 - MGP_CBAJ_P0057807 Zfp120 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057808.1 MGP_CBAJ_G0026323.1 mouse_genomes_project 2 164832758 164854946 - MGP_CBAJ_P0057808 Zfp120 protein_coding protein_coding MGP_CBAJ_T0057809.1 MGP_CBAJ_G0026323.1 mouse_genomes_project 2 164832758 164854916 - MGP_CBAJ_P0057809 Zfp120 protein_coding protein_coding MGP_CBAJ_T0057810.1 MGP_CBAJ_G0026323.1 mouse_genomes_project 2 164837619 164854894 - Zfp120 protein_coding processed_transcript MGP_CBAJ_T0058002.1 MGP_CBAJ_G0026383.1 mouse_genomes_project 2 168258844 168317504 + MGP_CBAJ_P0058002 Hck protein_coding protein_coding MGP_CBAJ_T0058003.1 MGP_CBAJ_G0026383.1 mouse_genomes_project 2 168258844 168317506 + MGP_CBAJ_P0058003 Hck protein_coding protein_coding MGP_CBAJ_T0057526.1 MGP_CBAJ_G0026250.1 mouse_genomes_project 2 146628610 146644765 + MGP_CBAJ_P0057526 Bmp2 protein_coding protein_coding MGP_CBAJ_T0055472.1 MGP_CBAJ_G0025737.1 mouse_genomes_project 2 94969784 94970985 + MGP_CBAJ_P0055472 Olfr1151 protein_coding protein_coding MGP_CBAJ_T0056269.1 MGP_CBAJ_G0025951.1 mouse_genomes_project 2 121384733 121385672 + MGP_CBAJ_P0056269 Olfr1276 protein_coding protein_coding MGP_CBAJ_T0000313.1 MGP_CBAJ_G0000258.1 mouse_genomes_project 2 21684265 21684334 + mt-Ts1 Mt_tRNA Mt_tRNA MGP_CBAJ_T0053609.1 MGP_CBAJ_G0025298.1 mouse_genomes_project 2 31969829 32014647 + MGP_CBAJ_P0053609 Fubp3 protein_coding protein_coding MGP_CBAJ_T0053610.1 MGP_CBAJ_G0025298.1 mouse_genomes_project 2 31969969 31992469 + MGP_CBAJ_P0053610 Fubp3 protein_coding protein_coding MGP_CBAJ_T0053611.1 MGP_CBAJ_G0025298.1 mouse_genomes_project 2 31969970 31982080 + Fubp3 protein_coding retained_intron MGP_CBAJ_T0053612.1 MGP_CBAJ_G0025298.1 mouse_genomes_project 2 31969992 31995760 + MGP_CBAJ_P0053612 Fubp3 protein_coding protein_coding MGP_CBAJ_T0053613.1 MGP_CBAJ_G0025298.1 mouse_genomes_project 2 31969995 32014640 + MGP_CBAJ_P0053613 Fubp3 protein_coding protein_coding MGP_CBAJ_T0053614.1 MGP_CBAJ_G0025298.1 mouse_genomes_project 2 31970005 31995746 + MGP_CBAJ_P0053614 Fubp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053615.1 MGP_CBAJ_G0025298.1 mouse_genomes_project 2 32000468 32010236 + MGP_CBAJ_P0053615 Fubp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053616.1 MGP_CBAJ_G0025298.1 mouse_genomes_project 2 32001903 32013061 + MGP_CBAJ_P0053616 Fubp3 protein_coding protein_coding MGP_CBAJ_T0053617.1 MGP_CBAJ_G0025298.1 mouse_genomes_project 2 32009659 32013837 + MGP_CBAJ_P0053617 Fubp3 protein_coding protein_coding MGP_CBAJ_T0053618.1 MGP_CBAJ_G0025298.1 mouse_genomes_project 2 32011889 32014639 + MGP_CBAJ_P0053618 Fubp3 protein_coding protein_coding MGP_CBAJ_T0053619.1 MGP_CBAJ_G0025298.1 mouse_genomes_project 2 32012307 32014641 + Fubp3 protein_coding retained_intron MGP_CBAJ_T0017531.1 MGP_CBAJ_G0015169.1 mouse_genomes_project 2 76781689 76791566 + Gm13662 processed_transcript processed_transcript MGP_CBAJ_T0013257.1 MGP_CBAJ_G0011369.1 mouse_genomes_project 2 13956317 13956747 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055440.1 MGP_CBAJ_G0025715.1 mouse_genomes_project 2 94441692 94442664 + MGP_CBAJ_P0055440 Olfr1123 protein_coding protein_coding MGP_CBAJ_T0054766.1 MGP_CBAJ_G0025509.1 mouse_genomes_project 2 73876805 73996312 - MGP_CBAJ_P0054766 Abcb11 protein_coding protein_coding MGP_CBAJ_T0054767.1 MGP_CBAJ_G0025509.1 mouse_genomes_project 2 73876812 73996314 - MGP_CBAJ_P0054767 Abcb11 protein_coding protein_coding MGP_CBAJ_T0054768.1 MGP_CBAJ_G0025509.1 mouse_genomes_project 2 73876812 73996298 - MGP_CBAJ_P0054768 Abcb11 protein_coding protein_coding MGP_CBAJ_T0054769.1 MGP_CBAJ_G0025509.1 mouse_genomes_project 2 73876833 73877602 - Abcb11 protein_coding processed_transcript MGP_CBAJ_T0053928.1 MGP_CBAJ_G0025346.1 mouse_genomes_project 2 34195452 34219808 - MGP_CBAJ_P0053928 Zbtb43 protein_coding protein_coding MGP_CBAJ_T0053929.1 MGP_CBAJ_G0025346.1 mouse_genomes_project 2 34195452 34225987 - MGP_CBAJ_P0053929 Zbtb43 protein_coding protein_coding MGP_CBAJ_T0053930.1 MGP_CBAJ_G0025346.1 mouse_genomes_project 2 34198687 34225960 - MGP_CBAJ_P0053930 Zbtb43 protein_coding protein_coding MGP_CBAJ_T0053931.1 MGP_CBAJ_G0025346.1 mouse_genomes_project 2 34199784 34222537 - MGP_CBAJ_P0053931 Zbtb43 protein_coding protein_coding MGP_CBAJ_T0053932.1 MGP_CBAJ_G0025346.1 mouse_genomes_project 2 34200053 34226014 - MGP_CBAJ_P0053932 Zbtb43 protein_coding protein_coding MGP_CBAJ_T0100418.1 MGP_CBAJ_G0038673.1 mouse_genomes_project 2 175227968 175228100 + Gm25090 snoRNA snoRNA MGP_CBAJ_T0010247.1 MGP_CBAJ_G0008385.1 mouse_genomes_project 2 8399427 8399552 + Mir669h miRNA miRNA MGP_CBAJ_T0007327.1 MGP_CBAJ_G0006002.1 mouse_genomes_project 2 190110209 190120233 - Gm14641 lincRNA lincRNA MGP_CBAJ_T0058156.1 MGP_CBAJ_G0026424.1 mouse_genomes_project 2 170608229 170613960 + Itch protein_coding retained_intron MGP_CBAJ_T0058157.1 MGP_CBAJ_G0026424.1 mouse_genomes_project 2 170608229 170665584 + Itch protein_coding retained_intron MGP_CBAJ_T0058158.1 MGP_CBAJ_G0026424.1 mouse_genomes_project 2 170608229 170724854 + MGP_CBAJ_P0058158 Itch protein_coding protein_coding MGP_CBAJ_T0058159.1 MGP_CBAJ_G0026424.1 mouse_genomes_project 2 170608244 170671356 + Itch protein_coding retained_intron MGP_CBAJ_T0058160.1 MGP_CBAJ_G0026424.1 mouse_genomes_project 2 170608251 170701191 + Itch protein_coding processed_transcript MGP_CBAJ_T0058161.1 MGP_CBAJ_G0026424.1 mouse_genomes_project 2 170608279 170724852 + MGP_CBAJ_P0058161 Itch protein_coding protein_coding MGP_CBAJ_T0058162.1 MGP_CBAJ_G0026424.1 mouse_genomes_project 2 170608281 170711182 + Itch protein_coding retained_intron MGP_CBAJ_T0057506.1 MGP_CBAJ_G0026244.1 mouse_genomes_project 2 145834319 145850733 + MGP_CBAJ_P0057506 Chgb protein_coding protein_coding MGP_CBAJ_T0100405.1 MGP_CBAJ_G0038660.1 mouse_genomes_project 2 165722778 165722922 + Gm23598 snoRNA snoRNA MGP_CBAJ_T0013609.1 MGP_CBAJ_G0011721.1 mouse_genomes_project 2 157927978 157928309 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0058488.1 MGP_CBAJ_G0026476.1 mouse_genomes_project 2 173262285 173326655 + MGP_CBAJ_P0058488 Src protein_coding protein_coding MGP_CBAJ_T0058489.1 MGP_CBAJ_G0026476.1 mouse_genomes_project 2 173277424 173310534 + Src protein_coding processed_transcript MGP_CBAJ_T0058490.1 MGP_CBAJ_G0026476.1 mouse_genomes_project 2 173277588 173326682 + MGP_CBAJ_P0058490 Src protein_coding protein_coding MGP_CBAJ_T0058491.1 MGP_CBAJ_G0026476.1 mouse_genomes_project 2 173277601 173326658 + MGP_CBAJ_P0058491 Src protein_coding protein_coding MGP_CBAJ_T0058492.1 MGP_CBAJ_G0026476.1 mouse_genomes_project 2 173277700 173313397 + Src protein_coding processed_transcript MGP_CBAJ_T0058493.1 MGP_CBAJ_G0026476.1 mouse_genomes_project 2 173277700 173310433 + Src protein_coding processed_transcript MGP_CBAJ_T0058494.1 MGP_CBAJ_G0026476.1 mouse_genomes_project 2 173310497 173326658 + MGP_CBAJ_P0058494 Src protein_coding protein_coding MGP_CBAJ_T0058495.1 MGP_CBAJ_G0026476.1 mouse_genomes_project 2 173311911 173325173 + MGP_CBAJ_P0058495 Src protein_coding protein_coding MGP_CBAJ_T0059335.1 MGP_CBAJ_G0026685.1 mouse_genomes_project 2 199178767 199191011 - MGP_CBAJ_P0059335 Rbbp8nl protein_coding protein_coding MGP_CBAJ_T0056524.1 MGP_CBAJ_G0026037.1 mouse_genomes_project 2 130521450 130534285 + MGP_CBAJ_P0056524 Dll4 protein_coding protein_coding MGP_CBAJ_T0056525.1 MGP_CBAJ_G0026037.1 mouse_genomes_project 2 130524204 130527961 + Dll4 protein_coding processed_transcript MGP_CBAJ_T0013320.1 MGP_CBAJ_G0011432.1 mouse_genomes_project 2 38827995 38828791 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098307.1 MGP_CBAJ_G0036574.1 mouse_genomes_project 2 1408615 1410753 + sense_intronic sense_intronic MGP_CBAJ_T0017669.1 MGP_CBAJ_G0015240.1 mouse_genomes_project 2 193366175 193368780 - Gm14617 processed_transcript retained_intron MGP_CBAJ_T0017670.1 MGP_CBAJ_G0015240.1 mouse_genomes_project 2 193366302 193371326 - Gm14617 processed_transcript lincRNA MGP_CBAJ_T0017671.1 MGP_CBAJ_G0015240.1 mouse_genomes_project 2 193368202 193371203 - Gm14617 processed_transcript lincRNA MGP_CBAJ_T0013524.1 MGP_CBAJ_G0011636.1 mouse_genomes_project 2 114318879 114319223 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0017498.1 MGP_CBAJ_G0015148.1 mouse_genomes_project 2 27853233 27858254 - Gm13372 processed_transcript processed_transcript MGP_CBAJ_T0013539.1 MGP_CBAJ_G0011651.1 mouse_genomes_project 2 121281391 121286161 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001015.1 MGP_CBAJ_G0000947.1 mouse_genomes_project 2 13145435 13148109 + TEC TEC MGP_CBAJ_T0055456.1 MGP_CBAJ_G0025723.1 mouse_genomes_project 2 94672083 94673028 + MGP_CBAJ_P0055456 Olfr1130 protein_coding protein_coding MGP_CBAJ_T0099093.1 MGP_CBAJ_G0037348.1 mouse_genomes_project 2 24641661 24641766 + Gm22572 snRNA snRNA MGP_CBAJ_T0011364.1 MGP_CBAJ_G0009502.1 mouse_genomes_project 2 23940063 23940388 + Gm25455 misc_RNA misc_RNA MGP_CBAJ_T0056722.1 MGP_CBAJ_G0026071.1 mouse_genomes_project 2 132235907 132358636 - MGP_CBAJ_P0056722 Ubr1 protein_coding protein_coding MGP_CBAJ_T0056723.1 MGP_CBAJ_G0026071.1 mouse_genomes_project 2 132238211 132247221 - Ubr1 protein_coding processed_transcript MGP_CBAJ_T0056724.1 MGP_CBAJ_G0026071.1 mouse_genomes_project 2 132248744 132270687 - Ubr1 protein_coding processed_transcript MGP_CBAJ_T0056725.1 MGP_CBAJ_G0026071.1 mouse_genomes_project 2 132282442 132297839 - Ubr1 protein_coding processed_transcript MGP_CBAJ_T0056726.1 MGP_CBAJ_G0026071.1 mouse_genomes_project 2 132304478 132315000 - Ubr1 protein_coding processed_transcript MGP_CBAJ_T0056727.1 MGP_CBAJ_G0026071.1 mouse_genomes_project 2 132330059 132358534 - Ubr1 protein_coding retained_intron MGP_CBAJ_T0056728.1 MGP_CBAJ_G0026071.1 mouse_genomes_project 2 132350039 132358613 - Ubr1 protein_coding retained_intron MGP_CBAJ_T0056332.1 MGP_CBAJ_G0025992.1 mouse_genomes_project 2 123818723 124239724 + MGP_CBAJ_P0056332 Fmn1 protein_coding protein_coding MGP_CBAJ_T0056333.1 MGP_CBAJ_G0025992.1 mouse_genomes_project 2 123818758 124002034 + Fmn1 protein_coding processed_transcript MGP_CBAJ_T0056334.1 MGP_CBAJ_G0025992.1 mouse_genomes_project 2 123818769 124232829 + MGP_CBAJ_P0056334 Fmn1 protein_coding protein_coding MGP_CBAJ_T0056335.1 MGP_CBAJ_G0025992.1 mouse_genomes_project 2 123856015 124232580 + MGP_CBAJ_P0056335 Fmn1 protein_coding protein_coding MGP_CBAJ_T0056336.1 MGP_CBAJ_G0025992.1 mouse_genomes_project 2 123939775 124232829 + MGP_CBAJ_P0056336 Fmn1 protein_coding protein_coding MGP_CBAJ_T0056337.1 MGP_CBAJ_G0025992.1 mouse_genomes_project 2 124205154 124213201 + Fmn1 protein_coding processed_transcript MGP_CBAJ_T0056338.1 MGP_CBAJ_G0025992.1 mouse_genomes_project 2 124205169 124232826 + Fmn1 protein_coding processed_transcript MGP_CBAJ_T0056339.1 MGP_CBAJ_G0025992.1 mouse_genomes_project 2 124205169 124232708 + Fmn1 protein_coding processed_transcript MGP_CBAJ_T0056340.1 MGP_CBAJ_G0025992.1 mouse_genomes_project 2 124231644 124232704 + Fmn1 protein_coding processed_transcript MGP_CBAJ_T0101078.1 MGP_CBAJ_G0039290.1 mouse_genomes_project 2 23806881 23807467 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0058120.1 MGP_CBAJ_G0026415.1 mouse_genomes_project 2 169961558 169983480 - MGP_CBAJ_P0058120 Pxmp4 protein_coding protein_coding MGP_CBAJ_T0058121.1 MGP_CBAJ_G0026415.1 mouse_genomes_project 2 169971993 169983460 - MGP_CBAJ_P0058121 Pxmp4 protein_coding protein_coding MGP_CBAJ_T0056503.1 MGP_CBAJ_G0026032.1 mouse_genomes_project 2 130392257 130394179 + Zfyve19 protein_coding processed_transcript MGP_CBAJ_T0056504.1 MGP_CBAJ_G0026032.1 mouse_genomes_project 2 130392652 130394242 + Zfyve19 protein_coding processed_transcript MGP_CBAJ_T0056505.1 MGP_CBAJ_G0026032.1 mouse_genomes_project 2 130392672 130395405 + Zfyve19 protein_coding processed_transcript MGP_CBAJ_T0056506.1 MGP_CBAJ_G0026032.1 mouse_genomes_project 2 130392681 130394783 + Zfyve19 protein_coding retained_intron MGP_CBAJ_T0056507.1 MGP_CBAJ_G0026032.1 mouse_genomes_project 2 130392770 130400471 + MGP_CBAJ_P0056507 Zfyve19 protein_coding protein_coding MGP_CBAJ_T0056508.1 MGP_CBAJ_G0026032.1 mouse_genomes_project 2 130394477 130398306 + Zfyve19 protein_coding retained_intron MGP_CBAJ_T0056509.1 MGP_CBAJ_G0026032.1 mouse_genomes_project 2 130395101 130395359 + Zfyve19 protein_coding processed_transcript MGP_CBAJ_T0056510.1 MGP_CBAJ_G0026032.1 mouse_genomes_project 2 130395280 130398328 + Zfyve19 protein_coding retained_intron MGP_CBAJ_T0056511.1 MGP_CBAJ_G0026032.1 mouse_genomes_project 2 130397872 130399814 + Zfyve19 protein_coding retained_intron MGP_CBAJ_T0056512.1 MGP_CBAJ_G0026032.1 mouse_genomes_project 2 130399681 130400466 + Zfyve19 protein_coding retained_intron MGP_CBAJ_T0013597.1 MGP_CBAJ_G0011709.1 mouse_genomes_project 2 153005027 153005536 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0052678.1 MGP_CBAJ_G0025140.1 mouse_genomes_project 2 24673737 24676049 - MGP_CBAJ_P0052678 Rnf224 protein_coding protein_coding MGP_CBAJ_T0052679.1 MGP_CBAJ_G0025140.1 mouse_genomes_project 2 24674244 24675951 - MGP_CBAJ_P0052679 Rnf224 protein_coding protein_coding MGP_CBAJ_T0003997.1 MGP_CBAJ_G0003542.1 mouse_genomes_project 2 134504325 134509420 - Bloc1s6os antisense antisense MGP_CBAJ_T0007194.1 MGP_CBAJ_G0005895.1 mouse_genomes_project 2 126059360 126070784 - 4930528P14Rik lincRNA lincRNA MGP_CBAJ_T0055651.1 MGP_CBAJ_G0025838.1 mouse_genomes_project 2 98856147 98866213 + MGP_CBAJ_P0055651 Psmc3 protein_coding protein_coding MGP_CBAJ_T0055652.1 MGP_CBAJ_G0025838.1 mouse_genomes_project 2 98856193 98873144 + MGP_CBAJ_P0055652 Psmc3 protein_coding protein_coding MGP_CBAJ_T0055653.1 MGP_CBAJ_G0025838.1 mouse_genomes_project 2 98856233 98858074 + Psmc3 protein_coding processed_transcript MGP_CBAJ_T0055654.1 MGP_CBAJ_G0025838.1 mouse_genomes_project 2 98856238 98866213 + MGP_CBAJ_P0055654 Psmc3 protein_coding protein_coding MGP_CBAJ_T0055655.1 MGP_CBAJ_G0025838.1 mouse_genomes_project 2 98856416 98859984 + MGP_CBAJ_P0055655 Psmc3 protein_coding protein_coding MGP_CBAJ_T0055656.1 MGP_CBAJ_G0025838.1 mouse_genomes_project 2 98856439 98859135 + MGP_CBAJ_P0055656 Psmc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0055657.1 MGP_CBAJ_G0025838.1 mouse_genomes_project 2 98856520 98857857 + Psmc3 protein_coding processed_transcript MGP_CBAJ_T0055658.1 MGP_CBAJ_G0025838.1 mouse_genomes_project 2 98856616 98857692 + Psmc3 protein_coding processed_transcript MGP_CBAJ_T0055659.1 MGP_CBAJ_G0025838.1 mouse_genomes_project 2 98856711 98858067 + Psmc3 protein_coding processed_transcript MGP_CBAJ_T0055660.1 MGP_CBAJ_G0025838.1 mouse_genomes_project 2 98860247 98866215 + Psmc3 protein_coding processed_transcript MGP_CBAJ_T0058893.1 MGP_CBAJ_G0026584.1 mouse_genomes_project 2 182166331 182167617 - Slc35c2 protein_coding retained_intron MGP_CBAJ_T0058894.1 MGP_CBAJ_G0026584.1 mouse_genomes_project 2 182166331 182177542 - MGP_CBAJ_P0058894 Slc35c2 protein_coding protein_coding MGP_CBAJ_T0058895.1 MGP_CBAJ_G0026584.1 mouse_genomes_project 2 182166331 182177614 - MGP_CBAJ_P0058895 Slc35c2 protein_coding protein_coding MGP_CBAJ_T0058896.1 MGP_CBAJ_G0026584.1 mouse_genomes_project 2 182166331 182177542 - MGP_CBAJ_P0058896 Slc35c2 protein_coding protein_coding MGP_CBAJ_T0058897.1 MGP_CBAJ_G0026584.1 mouse_genomes_project 2 182166331 182177656 - MGP_CBAJ_P0058897 Slc35c2 protein_coding protein_coding MGP_CBAJ_T0058898.1 MGP_CBAJ_G0026584.1 mouse_genomes_project 2 182166331 182177611 - MGP_CBAJ_P0058898 Slc35c2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058899.1 MGP_CBAJ_G0026584.1 mouse_genomes_project 2 182167229 182172010 - Slc35c2 protein_coding retained_intron MGP_CBAJ_T0058900.1 MGP_CBAJ_G0026584.1 mouse_genomes_project 2 182168129 182173155 - MGP_CBAJ_P0058900 Slc35c2 protein_coding protein_coding MGP_CBAJ_T0058901.1 MGP_CBAJ_G0026584.1 mouse_genomes_project 2 182168165 182173387 - MGP_CBAJ_P0058901 Slc35c2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058902.1 MGP_CBAJ_G0026584.1 mouse_genomes_project 2 182170396 182173387 - MGP_CBAJ_P0058902 Slc35c2 protein_coding protein_coding MGP_CBAJ_T0058903.1 MGP_CBAJ_G0026584.1 mouse_genomes_project 2 182170565 182177623 - MGP_CBAJ_P0058903 Slc35c2 protein_coding protein_coding MGP_CBAJ_T0058904.1 MGP_CBAJ_G0026584.1 mouse_genomes_project 2 182170565 182177622 - MGP_CBAJ_P0058904 Slc35c2 protein_coding protein_coding MGP_CBAJ_T0058905.1 MGP_CBAJ_G0026584.1 mouse_genomes_project 2 182170653 182176339 - MGP_CBAJ_P0058905 Slc35c2 protein_coding protein_coding MGP_CBAJ_T0058906.1 MGP_CBAJ_G0026584.1 mouse_genomes_project 2 182170658 182177614 - MGP_CBAJ_P0058906 Slc35c2 protein_coding protein_coding MGP_CBAJ_T0058907.1 MGP_CBAJ_G0026584.1 mouse_genomes_project 2 182171328 182177625 - Slc35c2 protein_coding retained_intron MGP_CBAJ_T0058908.1 MGP_CBAJ_G0026584.1 mouse_genomes_project 2 182172665 182177559 - MGP_CBAJ_P0058908 Slc35c2 protein_coding protein_coding MGP_CBAJ_T0058684.1 MGP_CBAJ_G0026517.1 mouse_genomes_project 2 180033143 180039394 - MGP_CBAJ_P0058684 Fitm2 protein_coding protein_coding MGP_CBAJ_T0010360.1 MGP_CBAJ_G0008498.1 mouse_genomes_project 2 191155581 191155659 - Gm22773 miRNA miRNA MGP_CBAJ_T0052607.1 MGP_CBAJ_G0025129.1 mouse_genomes_project 2 24361267 24469609 + MGP_CBAJ_P0052607 Pnpla7 protein_coding protein_coding MGP_CBAJ_T0052608.1 MGP_CBAJ_G0025129.1 mouse_genomes_project 2 24361307 24469609 + MGP_CBAJ_P0052608 Pnpla7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052609.1 MGP_CBAJ_G0025129.1 mouse_genomes_project 2 24361322 24366990 + MGP_CBAJ_P0052609 Pnpla7 protein_coding protein_coding MGP_CBAJ_T0052610.1 MGP_CBAJ_G0025129.1 mouse_genomes_project 2 24361323 24388524 + MGP_CBAJ_P0052610 Pnpla7 protein_coding protein_coding MGP_CBAJ_T0052611.1 MGP_CBAJ_G0025129.1 mouse_genomes_project 2 24361335 24365058 + Pnpla7 protein_coding processed_transcript MGP_CBAJ_T0052612.1 MGP_CBAJ_G0025129.1 mouse_genomes_project 2 24361382 24452717 + Pnpla7 protein_coding retained_intron MGP_CBAJ_T0052613.1 MGP_CBAJ_G0025129.1 mouse_genomes_project 2 24367070 24378938 + Pnpla7 protein_coding processed_transcript MGP_CBAJ_T0052614.1 MGP_CBAJ_G0025129.1 mouse_genomes_project 2 24388878 24391918 + Pnpla7 protein_coding retained_intron MGP_CBAJ_T0052615.1 MGP_CBAJ_G0025129.1 mouse_genomes_project 2 24389394 24412143 + MGP_CBAJ_P0052615 Pnpla7 protein_coding protein_coding MGP_CBAJ_T0052616.1 MGP_CBAJ_G0025129.1 mouse_genomes_project 2 24452875 24469609 + Pnpla7 protein_coding retained_intron MGP_CBAJ_T0052617.1 MGP_CBAJ_G0025129.1 mouse_genomes_project 2 24466903 24467642 + Pnpla7 protein_coding retained_intron MGP_CBAJ_T0052618.1 MGP_CBAJ_G0025129.1 mouse_genomes_project 2 24467217 24469320 + MGP_CBAJ_P0052618 Pnpla7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052619.1 MGP_CBAJ_G0025129.1 mouse_genomes_project 2 24467272 24467888 + Pnpla7 protein_coding retained_intron MGP_CBAJ_T0052620.1 MGP_CBAJ_G0025129.1 mouse_genomes_project 2 24467459 24468403 + Pnpla7 protein_coding retained_intron MGP_CBAJ_T0052621.1 MGP_CBAJ_G0025129.1 mouse_genomes_project 2 24468705 24469407 + Pnpla7 protein_coding retained_intron MGP_CBAJ_T0052879.1 MGP_CBAJ_G0025179.1 mouse_genomes_project 2 25211900 25212883 + MGP_CBAJ_P0052879 Bmyc protein_coding protein_coding MGP_CBAJ_T0010261.1 MGP_CBAJ_G0008399.1 mouse_genomes_project 2 26196080 26196138 - Mir126b miRNA miRNA MGP_CBAJ_T0057264.1 MGP_CBAJ_G0026195.1 mouse_genomes_project 2 142884155 142959588 + MGP_CBAJ_P0057264 Tmc2 protein_coding protein_coding MGP_CBAJ_T0057265.1 MGP_CBAJ_G0026195.1 mouse_genomes_project 2 142885505 142959360 + MGP_CBAJ_P0057265 Tmc2 protein_coding protein_coding MGP_CBAJ_T0058975.1 MGP_CBAJ_G0026597.1 mouse_genomes_project 2 183716286 183880208 - MGP_CBAJ_P0058975 Prex1 protein_coding protein_coding MGP_CBAJ_T0058976.1 MGP_CBAJ_G0026597.1 mouse_genomes_project 2 183716914 183732026 - MGP_CBAJ_P0058976 Prex1 protein_coding protein_coding MGP_CBAJ_T0058977.1 MGP_CBAJ_G0026597.1 mouse_genomes_project 2 183718265 183722926 - Prex1 protein_coding processed_transcript MGP_CBAJ_T0058978.1 MGP_CBAJ_G0026597.1 mouse_genomes_project 2 183749678 183753088 - Prex1 protein_coding retained_intron MGP_CBAJ_T0058979.1 MGP_CBAJ_G0026597.1 mouse_genomes_project 2 183788273 183867752 - Prex1 protein_coding processed_transcript MGP_CBAJ_T0058980.1 MGP_CBAJ_G0026597.1 mouse_genomes_project 2 183802236 183880244 - Prex1 protein_coding retained_intron MGP_CBAJ_T0058981.1 MGP_CBAJ_G0026597.1 mouse_genomes_project 2 183802449 183880055 - Prex1 protein_coding retained_intron MGP_CBAJ_T0056437.1 MGP_CBAJ_G0026016.1 mouse_genomes_project 2 129837862 129858669 - MGP_CBAJ_P0056437 Plcb2 protein_coding protein_coding MGP_CBAJ_T0056438.1 MGP_CBAJ_G0026016.1 mouse_genomes_project 2 129838341 129858590 - MGP_CBAJ_P0056438 Plcb2 protein_coding protein_coding MGP_CBAJ_T0056439.1 MGP_CBAJ_G0026016.1 mouse_genomes_project 2 129838525 129841716 - Plcb2 protein_coding retained_intron MGP_CBAJ_T0056440.1 MGP_CBAJ_G0026016.1 mouse_genomes_project 2 129839044 129840087 - Plcb2 protein_coding retained_intron MGP_CBAJ_T0056441.1 MGP_CBAJ_G0026016.1 mouse_genomes_project 2 129841162 129844455 - Plcb2 protein_coding retained_intron MGP_CBAJ_T0056442.1 MGP_CBAJ_G0026016.1 mouse_genomes_project 2 129844583 129858622 - Plcb2 protein_coding retained_intron MGP_CBAJ_T0056927.1 MGP_CBAJ_G0026112.1 mouse_genomes_project 2 133975374 133996535 - MGP_CBAJ_P0056927 protein_coding protein_coding MGP_CBAJ_T0056928.1 MGP_CBAJ_G0026112.1 mouse_genomes_project 2 133975375 133998628 - MGP_CBAJ_P0056928 protein_coding protein_coding MGP_CBAJ_T0056929.1 MGP_CBAJ_G0026112.1 mouse_genomes_project 2 133975610 133998872 - MGP_CBAJ_P0056929 protein_coding protein_coding MGP_CBAJ_T0056930.1 MGP_CBAJ_G0026112.1 mouse_genomes_project 2 133975610 133998542 - MGP_CBAJ_P0056930 protein_coding protein_coding MGP_CBAJ_T0056931.1 MGP_CBAJ_G0026112.1 mouse_genomes_project 2 133975610 133989028 - MGP_CBAJ_P0056931 protein_coding protein_coding MGP_CBAJ_T0056932.1 MGP_CBAJ_G0026112.1 mouse_genomes_project 2 133975681 133987705 - MGP_CBAJ_P0056932 protein_coding protein_coding MGP_CBAJ_T0056933.1 MGP_CBAJ_G0026112.1 mouse_genomes_project 2 133975835 133998607 - MGP_CBAJ_P0056933 protein_coding protein_coding MGP_CBAJ_T0056934.1 MGP_CBAJ_G0026112.1 mouse_genomes_project 2 133975835 133998842 - MGP_CBAJ_P0056934 protein_coding protein_coding MGP_CBAJ_T0056935.1 MGP_CBAJ_G0026112.1 mouse_genomes_project 2 133975870 133986659 - MGP_CBAJ_P0056935 protein_coding protein_coding MGP_CBAJ_T0056936.1 MGP_CBAJ_G0026112.1 mouse_genomes_project 2 133975986 133983563 - protein_coding retained_intron MGP_CBAJ_T0052146.1 MGP_CBAJ_G0025052.1 mouse_genomes_project 2 8019919 8132570 + MGP_CBAJ_P0052146 Itih5 protein_coding protein_coding MGP_CBAJ_T0007070.1 MGP_CBAJ_G0005793.1 mouse_genomes_project 2 30901209 30922130 - Gm14486 lincRNA lincRNA MGP_CBAJ_T0007071.1 MGP_CBAJ_G0005793.1 mouse_genomes_project 2 30901354 30930229 - Gm14486 lincRNA lincRNA MGP_CBAJ_T0052587.1 MGP_CBAJ_G0025125.1 mouse_genomes_project 2 24303241 24312605 - MGP_CBAJ_P0052587 Arrdc1 protein_coding protein_coding MGP_CBAJ_T0052588.1 MGP_CBAJ_G0025125.1 mouse_genomes_project 2 24303241 24312516 - MGP_CBAJ_P0052588 Arrdc1 protein_coding protein_coding MGP_CBAJ_T0052589.1 MGP_CBAJ_G0025125.1 mouse_genomes_project 2 24303244 24312498 - Arrdc1 protein_coding retained_intron MGP_CBAJ_T0052590.1 MGP_CBAJ_G0025125.1 mouse_genomes_project 2 24303878 24312520 - MGP_CBAJ_P0052590 Arrdc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052591.1 MGP_CBAJ_G0025125.1 mouse_genomes_project 2 24303944 24312498 - Arrdc1 protein_coding retained_intron MGP_CBAJ_T0052592.1 MGP_CBAJ_G0025125.1 mouse_genomes_project 2 24304047 24312495 - MGP_CBAJ_P0052592 Arrdc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052593.1 MGP_CBAJ_G0025125.1 mouse_genomes_project 2 24304072 24305090 - Arrdc1 protein_coding retained_intron MGP_CBAJ_T0052594.1 MGP_CBAJ_G0025125.1 mouse_genomes_project 2 24304212 24312527 - MGP_CBAJ_P0052594 Arrdc1 protein_coding protein_coding MGP_CBAJ_T0052595.1 MGP_CBAJ_G0025125.1 mouse_genomes_project 2 24304561 24305793 - Arrdc1 protein_coding retained_intron MGP_CBAJ_T0052596.1 MGP_CBAJ_G0025125.1 mouse_genomes_project 2 24304801 24312407 - MGP_CBAJ_P0052596 Arrdc1 protein_coding protein_coding MGP_CBAJ_T0052597.1 MGP_CBAJ_G0025125.1 mouse_genomes_project 2 24304884 24306021 - Arrdc1 protein_coding processed_transcript MGP_CBAJ_T0052598.1 MGP_CBAJ_G0025125.1 mouse_genomes_project 2 24305174 24312541 - Arrdc1 protein_coding retained_intron MGP_CBAJ_T0000989.1 MGP_CBAJ_G0000921.1 mouse_genomes_project 2 7896145 7897827 + TEC TEC MGP_CBAJ_T0013425.1 MGP_CBAJ_G0011537.1 mouse_genomes_project 2 79284514 79285515 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001059.1 MGP_CBAJ_G0000991.1 mouse_genomes_project 2 139631438 139632080 - TEC TEC MGP_CBAJ_T0001060.1 MGP_CBAJ_G0000991.1 mouse_genomes_project 2 139631734 139632058 - TEC TEC MGP_CBAJ_T0098021.1 MGP_CBAJ_G0036294.1 mouse_genomes_project 2 129448944 129449038 + Gm22651 rRNA rRNA MGP_CBAJ_T0059072.1 MGP_CBAJ_G0026615.1 mouse_genomes_project 2 185420241 185456434 - Fam65c protein_coding processed_transcript MGP_CBAJ_T0059073.1 MGP_CBAJ_G0026615.1 mouse_genomes_project 2 185420243 185456434 - MGP_CBAJ_P0059073 Fam65c protein_coding protein_coding MGP_CBAJ_T0059074.1 MGP_CBAJ_G0026615.1 mouse_genomes_project 2 185428487 185430185 - Fam65c protein_coding retained_intron MGP_CBAJ_T0059075.1 MGP_CBAJ_G0026615.1 mouse_genomes_project 2 185432225 185434771 - Fam65c protein_coding retained_intron MGP_CBAJ_T0053621.1 MGP_CBAJ_G0025300.1 mouse_genomes_project 2 32082739 32094766 + MGP_CBAJ_P0053621 Exosc2 protein_coding protein_coding MGP_CBAJ_T0053622.1 MGP_CBAJ_G0025300.1 mouse_genomes_project 2 32082743 32094252 + Exosc2 protein_coding retained_intron MGP_CBAJ_T0053623.1 MGP_CBAJ_G0025300.1 mouse_genomes_project 2 32082758 32093791 + MGP_CBAJ_P0053623 Exosc2 protein_coding protein_coding MGP_CBAJ_T0053624.1 MGP_CBAJ_G0025300.1 mouse_genomes_project 2 32082767 32091748 + MGP_CBAJ_P0053624 Exosc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053625.1 MGP_CBAJ_G0025300.1 mouse_genomes_project 2 32086520 32091821 + Exosc2 protein_coding processed_transcript MGP_CBAJ_T0053626.1 MGP_CBAJ_G0025300.1 mouse_genomes_project 2 32091571 32093784 + Exosc2 protein_coding retained_intron MGP_CBAJ_T0013465.1 MGP_CBAJ_G0011577.1 mouse_genomes_project 2 94109892 94112299 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013563.1 MGP_CBAJ_G0011675.1 mouse_genomes_project 2 133814123 133814470 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0059209.1 MGP_CBAJ_G0026656.1 mouse_genomes_project 2 192138027 192185576 + MGP_CBAJ_P0059209 Vapb protein_coding protein_coding MGP_CBAJ_T0059210.1 MGP_CBAJ_G0026656.1 mouse_genomes_project 2 192166794 192179370 + Vapb protein_coding processed_transcript MGP_CBAJ_T0017621.1 MGP_CBAJ_G0015216.1 mouse_genomes_project 2 144131505 144132796 + Gm14233 processed_transcript processed_transcript MGP_CBAJ_T0013229.1 MGP_CBAJ_G0011341.1 mouse_genomes_project 2 1158543 1159107 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013460.1 MGP_CBAJ_G0011572.1 mouse_genomes_project 2 91792995 91793216 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055480.1 MGP_CBAJ_G0025745.1 mouse_genomes_project 2 95130784 95132257 - MGP_CBAJ_P0055480 Olfr1160 protein_coding protein_coding MGP_CBAJ_T0010291.1 MGP_CBAJ_G0008429.1 mouse_genomes_project 2 65638652 65638736 - Gm22403 miRNA miRNA MGP_CBAJ_T0057096.1 MGP_CBAJ_G0026149.1 mouse_genomes_project 2 139471957 139476640 - MGP_CBAJ_P0057096 Itpripl1 protein_coding protein_coding MGP_CBAJ_T0057097.1 MGP_CBAJ_G0026149.1 mouse_genomes_project 2 139473606 139476503 - MGP_CBAJ_P0057097 Itpripl1 protein_coding protein_coding MGP_CBAJ_T0057098.1 MGP_CBAJ_G0026149.1 mouse_genomes_project 2 139473726 139475788 - MGP_CBAJ_P0057098 Itpripl1 protein_coding protein_coding MGP_CBAJ_T0052786.1 MGP_CBAJ_G0025159.1 mouse_genomes_project 2 24923550 24929362 - BC029214 protein_coding processed_transcript MGP_CBAJ_T0052787.1 MGP_CBAJ_G0025159.1 mouse_genomes_project 2 24923550 24928610 - BC029214 protein_coding processed_transcript MGP_CBAJ_T0052794.1 MGP_CBAJ_G0025159.1 mouse_genomes_project 2 24927859 24928727 - BC029214 protein_coding processed_transcript MGP_CBAJ_T0052795.1 MGP_CBAJ_G0025159.1 mouse_genomes_project 2 24927891 24929504 - MGP_CBAJ_P0052795 BC029214 protein_coding protein_coding MGP_CBAJ_T0052796.1 MGP_CBAJ_G0025159.1 mouse_genomes_project 2 24927893 24929482 - BC029214 protein_coding processed_transcript MGP_CBAJ_T0052797.1 MGP_CBAJ_G0025159.1 mouse_genomes_project 2 24927894 24928689 - BC029214 protein_coding processed_transcript MGP_CBAJ_T0052798.1 MGP_CBAJ_G0025159.1 mouse_genomes_project 2 24927894 24929074 - BC029214 protein_coding processed_transcript MGP_CBAJ_T0052799.1 MGP_CBAJ_G0025159.1 mouse_genomes_project 2 24927940 24929418 - BC029214 protein_coding processed_transcript MGP_CBAJ_T0052800.1 MGP_CBAJ_G0025159.1 mouse_genomes_project 2 24927970 24929375 - BC029214 protein_coding processed_transcript MGP_CBAJ_T0052801.1 MGP_CBAJ_G0025159.1 mouse_genomes_project 2 24928224 24929441 - MGP_CBAJ_P0052801 BC029214 protein_coding protein_coding MGP_CBAJ_T0052802.1 MGP_CBAJ_G0025159.1 mouse_genomes_project 2 24928421 24929433 - BC029214 protein_coding processed_transcript MGP_CBAJ_T0052803.1 MGP_CBAJ_G0025159.1 mouse_genomes_project 2 24928437 24929337 - BC029214 protein_coding processed_transcript MGP_CBAJ_T0052804.1 MGP_CBAJ_G0025159.1 mouse_genomes_project 2 24928668 24929358 - BC029214 protein_coding processed_transcript MGP_CBAJ_T0004109.1 MGP_CBAJ_G0003626.1 mouse_genomes_project 2 192573431 192636018 - Gm10714 antisense antisense MGP_CBAJ_T0004110.1 MGP_CBAJ_G0003626.1 mouse_genomes_project 2 192573953 192574282 - Gm10714 antisense antisense MGP_CBAJ_T0054880.1 MGP_CBAJ_G0025532.1 mouse_genomes_project 2 76167054 76226139 + MGP_CBAJ_P0054880 Dync1i2 protein_coding protein_coding MGP_CBAJ_T0054881.1 MGP_CBAJ_G0025532.1 mouse_genomes_project 2 76167089 76226135 + MGP_CBAJ_P0054881 Dync1i2 protein_coding protein_coding MGP_CBAJ_T0054882.1 MGP_CBAJ_G0025532.1 mouse_genomes_project 2 76167089 76226144 + MGP_CBAJ_P0054882 Dync1i2 protein_coding protein_coding MGP_CBAJ_T0054883.1 MGP_CBAJ_G0025532.1 mouse_genomes_project 2 76167106 76226132 + MGP_CBAJ_P0054883 Dync1i2 protein_coding protein_coding MGP_CBAJ_T0054884.1 MGP_CBAJ_G0025532.1 mouse_genomes_project 2 76167154 76208275 + Dync1i2 protein_coding processed_transcript MGP_CBAJ_T0054885.1 MGP_CBAJ_G0025532.1 mouse_genomes_project 2 76167182 76226144 + MGP_CBAJ_P0054885 Dync1i2 protein_coding protein_coding MGP_CBAJ_T0054886.1 MGP_CBAJ_G0025532.1 mouse_genomes_project 2 76167320 76226138 + MGP_CBAJ_P0054886 Dync1i2 protein_coding protein_coding MGP_CBAJ_T0054887.1 MGP_CBAJ_G0025532.1 mouse_genomes_project 2 76167332 76225700 + MGP_CBAJ_P0054887 Dync1i2 protein_coding protein_coding MGP_CBAJ_T0054888.1 MGP_CBAJ_G0025532.1 mouse_genomes_project 2 76167340 76226144 + MGP_CBAJ_P0054888 Dync1i2 protein_coding protein_coding MGP_CBAJ_T0054889.1 MGP_CBAJ_G0025532.1 mouse_genomes_project 2 76167352 76190125 + Dync1i2 protein_coding retained_intron MGP_CBAJ_T0054890.1 MGP_CBAJ_G0025532.1 mouse_genomes_project 2 76196054 76221432 + Dync1i2 protein_coding retained_intron MGP_CBAJ_T0054891.1 MGP_CBAJ_G0025532.1 mouse_genomes_project 2 76223387 76225899 + Dync1i2 protein_coding retained_intron MGP_CBAJ_T0003807.1 MGP_CBAJ_G0003406.1 mouse_genomes_project 2 466495 472429 + Gm13184 antisense antisense MGP_CBAJ_T0010288.1 MGP_CBAJ_G0008426.1 mouse_genomes_project 2 47133073 47133151 - Mir5129 miRNA miRNA MGP_CBAJ_T0013377.1 MGP_CBAJ_G0011489.1 mouse_genomes_project 2 61846178 61846660 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055469.1 MGP_CBAJ_G0025734.1 mouse_genomes_project 2 94896709 94897654 + MGP_CBAJ_P0055469 Olfr1143 protein_coding protein_coding MGP_CBAJ_T0052713.1 MGP_CBAJ_G0025149.1 mouse_genomes_project 2 24729527 24730793 + MGP_CBAJ_P0052713 Lrrc26 protein_coding protein_coding MGP_CBAJ_T0017485.1 MGP_CBAJ_G0015141.1 mouse_genomes_project 2 23761373 23810431 + Gm13415 processed_transcript antisense MGP_CBAJ_T0017486.1 MGP_CBAJ_G0015141.1 mouse_genomes_project 2 23763790 23786186 + Gm13415 processed_transcript antisense MGP_CBAJ_T0017487.1 MGP_CBAJ_G0015141.1 mouse_genomes_project 2 23763804 23766220 + Gm13415 processed_transcript retained_intron MGP_CBAJ_T0057413.1 MGP_CBAJ_G0026227.1 mouse_genomes_project 2 144059873 144073774 + MGP_CBAJ_P0057413 Mavs protein_coding nonsense_mediated_decay MGP_CBAJ_T0057414.1 MGP_CBAJ_G0026227.1 mouse_genomes_project 2 144059877 144073777 + MGP_CBAJ_P0057414 Mavs protein_coding protein_coding MGP_CBAJ_T0057415.1 MGP_CBAJ_G0026227.1 mouse_genomes_project 2 144059915 144073777 + MGP_CBAJ_P0057415 Mavs protein_coding protein_coding MGP_CBAJ_T0057416.1 MGP_CBAJ_G0026227.1 mouse_genomes_project 2 144067690 144071417 + Mavs protein_coding processed_transcript MGP_CBAJ_T0052062.1 MGP_CBAJ_G0025037.1 mouse_genomes_project 2 3206492 3207347 - Gm13199 protein_coding processed_transcript MGP_CBAJ_T0052063.1 MGP_CBAJ_G0025037.1 mouse_genomes_project 2 3206493 3207336 - MGP_CBAJ_P0052063 Gm13199 protein_coding protein_coding MGP_CBAJ_T0057561.1 MGP_CBAJ_G0026256.1 mouse_genomes_project 2 149418508 149755031 - MGP_CBAJ_P0057561 Pak7 protein_coding protein_coding MGP_CBAJ_T0057562.1 MGP_CBAJ_G0026256.1 mouse_genomes_project 2 149419301 149755053 - MGP_CBAJ_P0057562 Pak7 protein_coding protein_coding MGP_CBAJ_T0057563.1 MGP_CBAJ_G0026256.1 mouse_genomes_project 2 149625635 149755060 - Pak7 protein_coding retained_intron MGP_CBAJ_T0056042.1 MGP_CBAJ_G0025901.1 mouse_genomes_project 2 112490375 112530268 - MGP_CBAJ_P0056042 Ehf protein_coding protein_coding MGP_CBAJ_T0056043.1 MGP_CBAJ_G0025901.1 mouse_genomes_project 2 112490967 112530156 - MGP_CBAJ_P0056043 Ehf protein_coding protein_coding MGP_CBAJ_T0056044.1 MGP_CBAJ_G0025901.1 mouse_genomes_project 2 112493477 112510768 - MGP_CBAJ_P0056044 Ehf protein_coding protein_coding MGP_CBAJ_T0056045.1 MGP_CBAJ_G0025901.1 mouse_genomes_project 2 112493674 112501225 - Ehf protein_coding retained_intron MGP_CBAJ_T0056046.1 MGP_CBAJ_G0025901.1 mouse_genomes_project 2 112494042 112526555 - MGP_CBAJ_P0056046 Ehf protein_coding protein_coding MGP_CBAJ_T0056047.1 MGP_CBAJ_G0025901.1 mouse_genomes_project 2 112501076 112517960 - MGP_CBAJ_P0056047 Ehf protein_coding protein_coding MGP_CBAJ_T0056048.1 MGP_CBAJ_G0025901.1 mouse_genomes_project 2 112503769 112529910 - MGP_CBAJ_P0056048 Ehf protein_coding protein_coding MGP_CBAJ_T0056049.1 MGP_CBAJ_G0025901.1 mouse_genomes_project 2 112506090 112530157 - Ehf protein_coding retained_intron MGP_CBAJ_T0017470.1 MGP_CBAJ_G0015133.1 mouse_genomes_project 2 1377283 1393314 - Gm13187 processed_transcript processed_transcript MGP_CBAJ_T0017471.1 MGP_CBAJ_G0015133.1 mouse_genomes_project 2 1380847 1393369 - Gm13187 processed_transcript processed_transcript MGP_CBAJ_T0017472.1 MGP_CBAJ_G0015133.1 mouse_genomes_project 2 1392712 1393369 - Gm13187 processed_transcript processed_transcript MGP_CBAJ_T0101088.1 MGP_CBAJ_G0039298.1 mouse_genomes_project 2 144756672 144756912 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0013283.1 MGP_CBAJ_G0011395.1 mouse_genomes_project 2 22377440 22379078 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003826.1 MGP_CBAJ_G0003420.1 mouse_genomes_project 2 11955628 11957547 + Gm37126 antisense antisense MGP_CBAJ_T0058891.1 MGP_CBAJ_G0026583.1 mouse_genomes_project 2 181965099 182109520 - MGP_CBAJ_P0058891 Cdh22 protein_coding protein_coding MGP_CBAJ_T0058892.1 MGP_CBAJ_G0026583.1 mouse_genomes_project 2 181965919 182047034 - MGP_CBAJ_P0058892 Cdh22 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056910.1 MGP_CBAJ_G0026104.1 mouse_genomes_project 2 133750949 133756338 + MGP_CBAJ_P0056910 B2m protein_coding protein_coding MGP_CBAJ_T0007040.1 MGP_CBAJ_G0005771.1 mouse_genomes_project 2 9333044 9337668 + Gm13293 lincRNA lincRNA MGP_CBAJ_T0004007.1 MGP_CBAJ_G0003549.1 mouse_genomes_project 2 141764857 141769751 - antisense antisense MGP_CBAJ_T0099138.1 MGP_CBAJ_G0037393.1 mouse_genomes_project 2 167453328 167453391 + Gm27343 snRNA snRNA MGP_CBAJ_T0003820.1 MGP_CBAJ_G0003415.1 mouse_genomes_project 2 4368767 4371422 + Gm13389 antisense antisense MGP_CBAJ_T0017597.1 MGP_CBAJ_G0015206.1 mouse_genomes_project 2 134370570 134372697 + processed_transcript processed_transcript MGP_CBAJ_T0017598.1 MGP_CBAJ_G0015206.1 mouse_genomes_project 2 134370591 134383735 + processed_transcript processed_transcript MGP_CBAJ_T0057936.1 MGP_CBAJ_G0026359.1 mouse_genomes_project 2 167535415 167539670 - MGP_CBAJ_P0057936 Defb22 protein_coding protein_coding MGP_CBAJ_T0057626.1 MGP_CBAJ_G0026272.1 mouse_genomes_project 2 156561363 156867980 - MGP_CBAJ_P0057626 Kif16b protein_coding protein_coding MGP_CBAJ_T0057627.1 MGP_CBAJ_G0026272.1 mouse_genomes_project 2 156562600 156594896 - Kif16b protein_coding retained_intron MGP_CBAJ_T0057628.1 MGP_CBAJ_G0026272.1 mouse_genomes_project 2 156563647 156867820 - MGP_CBAJ_P0057628 Kif16b protein_coding unknown_likely_coding MGP_CBAJ_T0010227.1 MGP_CBAJ_G0008365.1 mouse_genomes_project 2 8385391 8385502 + miRNA miRNA MGP_CBAJ_T0101783.1 MGP_CBAJ_G0039814.1 mouse_genomes_project 2 37912466 37913048 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0011363.1 MGP_CBAJ_G0009501.1 mouse_genomes_project 2 23095459 23095634 + Gm26323 misc_RNA misc_RNA MGP_CBAJ_T0058571.1 MGP_CBAJ_G0026493.1 mouse_genomes_project 2 174683300 174793434 + Ppp1r16b protein_coding retained_intron MGP_CBAJ_T0058572.1 MGP_CBAJ_G0026493.1 mouse_genomes_project 2 174683300 174800714 + MGP_CBAJ_P0058572 Ppp1r16b protein_coding protein_coding MGP_CBAJ_T0058573.1 MGP_CBAJ_G0026493.1 mouse_genomes_project 2 174684635 174800714 + MGP_CBAJ_P0058573 Ppp1r16b protein_coding protein_coding MGP_CBAJ_T0058574.1 MGP_CBAJ_G0026493.1 mouse_genomes_project 2 174685021 174800714 + MGP_CBAJ_P0058574 Ppp1r16b protein_coding protein_coding MGP_CBAJ_T0058575.1 MGP_CBAJ_G0026493.1 mouse_genomes_project 2 174720470 174800714 + MGP_CBAJ_P0058575 Ppp1r16b protein_coding protein_coding MGP_CBAJ_T0017619.1 MGP_CBAJ_G0015215.1 mouse_genomes_project 2 143664188 143697021 - A730017L22Rik processed_transcript processed_transcript MGP_CBAJ_T0017620.1 MGP_CBAJ_G0015215.1 mouse_genomes_project 2 143668092 143697044 - A730017L22Rik processed_transcript processed_transcript MGP_CBAJ_T0057451.1 MGP_CBAJ_G0026234.1 mouse_genomes_project 2 144835584 144871498 + MGP_CBAJ_P0057451 protein_coding protein_coding MGP_CBAJ_T0057452.1 MGP_CBAJ_G0026234.1 mouse_genomes_project 2 144835584 144871498 + MGP_CBAJ_P0057452 protein_coding protein_coding MGP_CBAJ_T0017518.1 MGP_CBAJ_G0015160.1 mouse_genomes_project 2 55299384 55306258 + A430018G15Rik processed_transcript processed_transcript MGP_CBAJ_T0017519.1 MGP_CBAJ_G0015160.1 mouse_genomes_project 2 55299384 55309248 + A430018G15Rik processed_transcript processed_transcript MGP_CBAJ_T0056988.1 MGP_CBAJ_G0026124.1 mouse_genomes_project 2 137212932 137230616 + MGP_CBAJ_P0056988 Ctxn2 protein_coding protein_coding MGP_CBAJ_T0054983.1 MGP_CBAJ_G0025551.1 mouse_genomes_project 2 78660673 78776202 - MGP_CBAJ_P0054983 Wipf1 protein_coding protein_coding MGP_CBAJ_T0054984.1 MGP_CBAJ_G0025551.1 mouse_genomes_project 2 78661102 78720700 - MGP_CBAJ_P0054984 Wipf1 protein_coding protein_coding MGP_CBAJ_T0054985.1 MGP_CBAJ_G0025551.1 mouse_genomes_project 2 78663210 78687104 - MGP_CBAJ_P0054985 Wipf1 protein_coding protein_coding MGP_CBAJ_T0054986.1 MGP_CBAJ_G0025551.1 mouse_genomes_project 2 78670744 78721406 - MGP_CBAJ_P0054986 Wipf1 protein_coding protein_coding MGP_CBAJ_T0054987.1 MGP_CBAJ_G0025551.1 mouse_genomes_project 2 78677720 78685835 - MGP_CBAJ_P0054987 Wipf1 protein_coding protein_coding MGP_CBAJ_T0054988.1 MGP_CBAJ_G0025551.1 mouse_genomes_project 2 78677780 78775947 - Wipf1 protein_coding processed_transcript MGP_CBAJ_T0054989.1 MGP_CBAJ_G0025551.1 mouse_genomes_project 2 78681188 78775850 - Wipf1 protein_coding processed_transcript MGP_CBAJ_T0054589.1 MGP_CBAJ_G0025477.1 mouse_genomes_project 2 65421829 65497199 + MGP_CBAJ_P0054589 Tank protein_coding protein_coding MGP_CBAJ_T0054590.1 MGP_CBAJ_G0025477.1 mouse_genomes_project 2 65421830 65497199 + MGP_CBAJ_P0054590 Tank protein_coding protein_coding MGP_CBAJ_T0054591.1 MGP_CBAJ_G0025477.1 mouse_genomes_project 2 65421855 65497118 + Tank protein_coding processed_transcript MGP_CBAJ_T0054592.1 MGP_CBAJ_G0025477.1 mouse_genomes_project 2 65421855 65486957 + Tank protein_coding processed_transcript MGP_CBAJ_T0054593.1 MGP_CBAJ_G0025477.1 mouse_genomes_project 2 65437957 65497199 + MGP_CBAJ_P0054593 Tank protein_coding protein_coding MGP_CBAJ_T0054594.1 MGP_CBAJ_G0025477.1 mouse_genomes_project 2 65437977 65497199 + MGP_CBAJ_P0054594 Tank protein_coding protein_coding MGP_CBAJ_T0054595.1 MGP_CBAJ_G0025477.1 mouse_genomes_project 2 65438016 65494849 + MGP_CBAJ_P0054595 Tank protein_coding protein_coding MGP_CBAJ_T0054596.1 MGP_CBAJ_G0025477.1 mouse_genomes_project 2 65438044 65459844 + Tank protein_coding processed_transcript MGP_CBAJ_T0054597.1 MGP_CBAJ_G0025477.1 mouse_genomes_project 2 65438045 65497118 + Tank protein_coding processed_transcript MGP_CBAJ_T0054598.1 MGP_CBAJ_G0025477.1 mouse_genomes_project 2 65470763 65489240 + Tank protein_coding processed_transcript MGP_CBAJ_T0054599.1 MGP_CBAJ_G0025477.1 mouse_genomes_project 2 65486880 65493027 + Tank protein_coding processed_transcript MGP_CBAJ_T0052750.1 MGP_CBAJ_G0025154.1 mouse_genomes_project 2 24827347 24833240 + MGP_CBAJ_P0052750 Sapcd2 protein_coding protein_coding MGP_CBAJ_T0052751.1 MGP_CBAJ_G0025154.1 mouse_genomes_project 2 24827356 24831830 + MGP_CBAJ_P0052751 Sapcd2 protein_coding protein_coding MGP_CBAJ_T0052752.1 MGP_CBAJ_G0025154.1 mouse_genomes_project 2 24827360 24831830 + MGP_CBAJ_P0052752 Sapcd2 protein_coding protein_coding MGP_CBAJ_T0052753.1 MGP_CBAJ_G0025154.1 mouse_genomes_project 2 24827386 24830169 + Sapcd2 protein_coding processed_transcript MGP_CBAJ_T0052754.1 MGP_CBAJ_G0025154.1 mouse_genomes_project 2 24830047 24831299 + Sapcd2 protein_coding processed_transcript MGP_CBAJ_T0052755.1 MGP_CBAJ_G0025154.1 mouse_genomes_project 2 24830800 24831804 + Sapcd2 protein_coding processed_transcript MGP_CBAJ_T0052756.1 MGP_CBAJ_G0025154.1 mouse_genomes_project 2 24830986 24831827 + Sapcd2 protein_coding processed_transcript MGP_CBAJ_T0054746.1 MGP_CBAJ_G0025505.1 mouse_genomes_project 2 73455576 73724483 + MGP_CBAJ_P0054746 Cers6 protein_coding protein_coding MGP_CBAJ_T0054747.1 MGP_CBAJ_G0025505.1 mouse_genomes_project 2 73455577 73456860 + Cers6 protein_coding retained_intron MGP_CBAJ_T0054748.1 MGP_CBAJ_G0025505.1 mouse_genomes_project 2 73455585 73676517 + Cers6 protein_coding retained_intron MGP_CBAJ_T0054749.1 MGP_CBAJ_G0025505.1 mouse_genomes_project 2 73455605 73529835 + Cers6 protein_coding retained_intron MGP_CBAJ_T0054750.1 MGP_CBAJ_G0025505.1 mouse_genomes_project 2 73455721 73718949 + MGP_CBAJ_P0054750 Cers6 protein_coding protein_coding MGP_CBAJ_T0054751.1 MGP_CBAJ_G0025505.1 mouse_genomes_project 2 73544789 73652057 + Cers6 protein_coding retained_intron MGP_CBAJ_T0054752.1 MGP_CBAJ_G0025505.1 mouse_genomes_project 2 73557440 73652413 + Cers6 protein_coding retained_intron MGP_CBAJ_T0053044.1 MGP_CBAJ_G0025207.1 mouse_genomes_project 2 26292258 26295867 - MGP_CBAJ_P0053044 Lcn4 protein_coding protein_coding MGP_CBAJ_T0053669.1 MGP_CBAJ_G0025309.1 mouse_genomes_project 2 32709043 32793689 + MGP_CBAJ_P0053669 Prrc2b protein_coding protein_coding MGP_CBAJ_T0053670.1 MGP_CBAJ_G0025309.1 mouse_genomes_project 2 32709109 32793674 + MGP_CBAJ_P0053670 Prrc2b protein_coding protein_coding MGP_CBAJ_T0053671.1 MGP_CBAJ_G0025309.1 mouse_genomes_project 2 32741295 32790314 + MGP_CBAJ_P0053671 Prrc2b protein_coding protein_coding MGP_CBAJ_T0053672.1 MGP_CBAJ_G0025309.1 mouse_genomes_project 2 32764418 32777694 + Prrc2b protein_coding processed_transcript MGP_CBAJ_T0053673.1 MGP_CBAJ_G0025309.1 mouse_genomes_project 2 32770233 32777353 + MGP_CBAJ_P0053673 Prrc2b protein_coding protein_coding MGP_CBAJ_T0053674.1 MGP_CBAJ_G0025309.1 mouse_genomes_project 2 32774113 32777648 + MGP_CBAJ_P0053674 Prrc2b protein_coding protein_coding MGP_CBAJ_T0053675.1 MGP_CBAJ_G0025309.1 mouse_genomes_project 2 32775247 32777192 + Prrc2b protein_coding processed_transcript MGP_CBAJ_T0053676.1 MGP_CBAJ_G0025309.1 mouse_genomes_project 2 32775315 32779403 + Prrc2b protein_coding processed_transcript MGP_CBAJ_T0053677.1 MGP_CBAJ_G0025309.1 mouse_genomes_project 2 32777565 32780355 + Prrc2b protein_coding processed_transcript MGP_CBAJ_T0053678.1 MGP_CBAJ_G0025309.1 mouse_genomes_project 2 32777803 32779471 + Prrc2b protein_coding processed_transcript MGP_CBAJ_T0052085.1 MGP_CBAJ_G0025042.1 mouse_genomes_project 2 3596057 3617902 - MGP_CBAJ_P0052085 Echdc3 protein_coding protein_coding MGP_CBAJ_T0052086.1 MGP_CBAJ_G0025042.1 mouse_genomes_project 2 3597101 3603801 - Echdc3 protein_coding processed_transcript MGP_CBAJ_T0052087.1 MGP_CBAJ_G0025042.1 mouse_genomes_project 2 3610873 3617848 - Echdc3 protein_coding retained_intron MGP_CBAJ_T0013532.1 MGP_CBAJ_G0011644.1 mouse_genomes_project 2 118301981 118302609 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0052668.1 MGP_CBAJ_G0025137.1 mouse_genomes_project 2 24651764 24655260 + MGP_CBAJ_P0052668 Fam166a protein_coding protein_coding MGP_CBAJ_T0052669.1 MGP_CBAJ_G0025137.1 mouse_genomes_project 2 24654377 24655260 + Fam166a protein_coding processed_transcript MGP_CBAJ_T0007246.1 MGP_CBAJ_G0005936.1 mouse_genomes_project 2 161731749 161733272 - Gm14110 lincRNA lincRNA MGP_CBAJ_T0007232.1 MGP_CBAJ_G0005923.1 mouse_genomes_project 2 146507643 146530726 + A430048G15Rik lincRNA lincRNA MGP_CBAJ_T0057813.1 MGP_CBAJ_G0026326.1 mouse_genomes_project 2 165412369 165441962 - MGP_CBAJ_P0057813 Apmap protein_coding protein_coding MGP_CBAJ_T0057814.1 MGP_CBAJ_G0026326.1 mouse_genomes_project 2 165416410 165433649 - Apmap protein_coding processed_transcript MGP_CBAJ_T0057815.1 MGP_CBAJ_G0026326.1 mouse_genomes_project 2 165423653 165441939 - Apmap protein_coding processed_transcript MGP_CBAJ_T0055072.1 MGP_CBAJ_G0025577.1 mouse_genomes_project 2 81964939 81978787 + MGP_CBAJ_P0055072 Rbm45 protein_coding protein_coding MGP_CBAJ_T0013236.1 MGP_CBAJ_G0011348.1 mouse_genomes_project 2 2906284 2906886 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0056530.1 MGP_CBAJ_G0026040.1 mouse_genomes_project 2 130742909 130784833 - MGP_CBAJ_P0056530 Exd1 protein_coding protein_coding MGP_CBAJ_T0056531.1 MGP_CBAJ_G0026040.1 mouse_genomes_project 2 130742915 130776376 - MGP_CBAJ_P0056531 Exd1 protein_coding protein_coding MGP_CBAJ_T0056532.1 MGP_CBAJ_G0026040.1 mouse_genomes_project 2 130773714 130784400 - MGP_CBAJ_P0056532 Exd1 protein_coding protein_coding MGP_CBAJ_T0017509.1 MGP_CBAJ_G0015155.1 mouse_genomes_project 2 35831699 35834843 + Gm13448 processed_transcript processed_transcript MGP_CBAJ_T0100376.1 MGP_CBAJ_G0038631.1 mouse_genomes_project 2 91977803 91977947 + Gm23716 snoRNA snoRNA MGP_CBAJ_T0054841.1 MGP_CBAJ_G0025525.1 mouse_genomes_project 2 75419378 75434400 + MGP_CBAJ_P0054841 Gad1 protein_coding protein_coding MGP_CBAJ_T0054842.1 MGP_CBAJ_G0025525.1 mouse_genomes_project 2 75429181 75474207 + MGP_CBAJ_P0054842 Gad1 protein_coding protein_coding MGP_CBAJ_T0054843.1 MGP_CBAJ_G0025525.1 mouse_genomes_project 2 75429181 75456762 + MGP_CBAJ_P0054843 Gad1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054844.1 MGP_CBAJ_G0025525.1 mouse_genomes_project 2 75429302 75444268 + Gad1 protein_coding retained_intron MGP_CBAJ_T0054845.1 MGP_CBAJ_G0025525.1 mouse_genomes_project 2 75429335 75451739 + MGP_CBAJ_P0054845 Gad1 protein_coding protein_coding MGP_CBAJ_T0054846.1 MGP_CBAJ_G0025525.1 mouse_genomes_project 2 75430043 75452260 + MGP_CBAJ_P0054846 Gad1 protein_coding protein_coding MGP_CBAJ_T0054847.1 MGP_CBAJ_G0025525.1 mouse_genomes_project 2 75430586 75453085 + MGP_CBAJ_P0054847 Gad1 protein_coding protein_coding MGP_CBAJ_T0054848.1 MGP_CBAJ_G0025525.1 mouse_genomes_project 2 75433545 75474205 + Gad1 protein_coding processed_transcript MGP_CBAJ_T0013505.1 MGP_CBAJ_G0011617.1 mouse_genomes_project 2 109282648 109282904 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0054076.1 MGP_CBAJ_G0025368.1 mouse_genomes_project 2 36541152 36734889 + MGP_CBAJ_P0054076 Dab2ip protein_coding protein_coding MGP_CBAJ_T0054077.1 MGP_CBAJ_G0025368.1 mouse_genomes_project 2 36565714 36734887 + MGP_CBAJ_P0054077 Dab2ip protein_coding protein_coding MGP_CBAJ_T0054078.1 MGP_CBAJ_G0025368.1 mouse_genomes_project 2 36608469 36734887 + MGP_CBAJ_P0054078 Dab2ip protein_coding nonsense_mediated_decay MGP_CBAJ_T0054079.1 MGP_CBAJ_G0025368.1 mouse_genomes_project 2 36608648 36734891 + MGP_CBAJ_P0054079 Dab2ip protein_coding protein_coding MGP_CBAJ_T0054080.1 MGP_CBAJ_G0025368.1 mouse_genomes_project 2 36608648 36734887 + MGP_CBAJ_P0054080 Dab2ip protein_coding protein_coding MGP_CBAJ_T0054081.1 MGP_CBAJ_G0025368.1 mouse_genomes_project 2 36662627 36712762 + Dab2ip protein_coding retained_intron MGP_CBAJ_T0054082.1 MGP_CBAJ_G0025368.1 mouse_genomes_project 2 36662796 36734889 + MGP_CBAJ_P0054082 Dab2ip protein_coding nonsense_mediated_decay MGP_CBAJ_T0054083.1 MGP_CBAJ_G0025368.1 mouse_genomes_project 2 36662874 36713848 + Dab2ip protein_coding processed_transcript MGP_CBAJ_T0054084.1 MGP_CBAJ_G0025368.1 mouse_genomes_project 2 36695904 36734887 + MGP_CBAJ_P0054084 Dab2ip protein_coding protein_coding MGP_CBAJ_T0054085.1 MGP_CBAJ_G0025368.1 mouse_genomes_project 2 36696243 36732842 + MGP_CBAJ_P0054085 Dab2ip protein_coding protein_coding MGP_CBAJ_T0054086.1 MGP_CBAJ_G0025368.1 mouse_genomes_project 2 36714241 36734889 + MGP_CBAJ_P0054086 Dab2ip protein_coding protein_coding MGP_CBAJ_T0013673.1 MGP_CBAJ_G0011785.1 mouse_genomes_project 2 179368835 179371150 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007152.1 MGP_CBAJ_G0005860.1 mouse_genomes_project 2 89455071 89497049 - lincRNA lincRNA MGP_CBAJ_T0057584.1 MGP_CBAJ_G0026261.1 mouse_genomes_project 2 150503141 150543589 - MGP_CBAJ_P0057584 Jag1 protein_coding protein_coding MGP_CBAJ_T0057585.1 MGP_CBAJ_G0026261.1 mouse_genomes_project 2 150504573 150507630 - Jag1 protein_coding retained_intron MGP_CBAJ_T0013347.1 MGP_CBAJ_G0011459.1 mouse_genomes_project 2 51692084 51692513 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097802.1 MGP_CBAJ_G0036075.1 mouse_genomes_project 2 13034096 13034718 - pseudogene pseudogene MGP_CBAJ_T0001041.1 MGP_CBAJ_G0000973.1 mouse_genomes_project 2 40119201 40124292 - TEC TEC MGP_CBAJ_T0013356.1 MGP_CBAJ_G0011468.1 mouse_genomes_project 2 54279883 54280986 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0058680.1 MGP_CBAJ_G0026516.1 mouse_genomes_project 2 180001814 180018585 + MGP_CBAJ_P0058680 Gdap1l1 protein_coding protein_coding MGP_CBAJ_T0058681.1 MGP_CBAJ_G0026516.1 mouse_genomes_project 2 180001816 180018236 + MGP_CBAJ_P0058681 Gdap1l1 protein_coding protein_coding MGP_CBAJ_T0058682.1 MGP_CBAJ_G0026516.1 mouse_genomes_project 2 180001816 180017216 + MGP_CBAJ_P0058682 Gdap1l1 protein_coding protein_coding MGP_CBAJ_T0058683.1 MGP_CBAJ_G0026516.1 mouse_genomes_project 2 180001871 180017058 + MGP_CBAJ_P0058683 Gdap1l1 protein_coding protein_coding MGP_CBAJ_T0057448.1 MGP_CBAJ_G0026232.1 mouse_genomes_project 2 144765051 144771097 - MGP_CBAJ_P0057448 Erv3 protein_coding protein_coding MGP_CBAJ_T0013653.1 MGP_CBAJ_G0011765.1 mouse_genomes_project 2 171649112 171649655 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0053925.1 MGP_CBAJ_G0025345.1 mouse_genomes_project 2 34132831 34164625 - MGP_CBAJ_P0053925 Zbtb34 protein_coding protein_coding MGP_CBAJ_T0053926.1 MGP_CBAJ_G0025345.1 mouse_genomes_project 2 34132831 34161523 - MGP_CBAJ_P0053926 Zbtb34 protein_coding protein_coding MGP_CBAJ_T0053927.1 MGP_CBAJ_G0025345.1 mouse_genomes_project 2 34138642 34164618 - Zbtb34 protein_coding processed_transcript MGP_CBAJ_T0055204.1 MGP_CBAJ_G0025598.1 mouse_genomes_project 2 86497610 86590070 - MGP_CBAJ_P0055204 Nckap1 protein_coding protein_coding MGP_CBAJ_T0055205.1 MGP_CBAJ_G0025598.1 mouse_genomes_project 2 86497616 86590186 - MGP_CBAJ_P0055205 Nckap1 protein_coding protein_coding MGP_CBAJ_T0055206.1 MGP_CBAJ_G0025598.1 mouse_genomes_project 2 86504774 86525060 - Nckap1 protein_coding processed_transcript MGP_CBAJ_T0055207.1 MGP_CBAJ_G0025598.1 mouse_genomes_project 2 86550056 86560006 - Nckap1 protein_coding processed_transcript MGP_CBAJ_T0055208.1 MGP_CBAJ_G0025598.1 mouse_genomes_project 2 86553867 86559726 - Nckap1 protein_coding processed_transcript MGP_CBAJ_T0101812.1 MGP_CBAJ_G0039843.1 mouse_genomes_project 2 95117796 95118688 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0004001.1 MGP_CBAJ_G0003546.1 mouse_genomes_project 2 140093986 140102776 + Gm14244 antisense antisense MGP_CBAJ_T0057207.1 MGP_CBAJ_G0026178.1 mouse_genomes_project 2 141516921 141518058 - MGP_CBAJ_P0057207 Gm10762 protein_coding protein_coding MGP_CBAJ_T0013335.1 MGP_CBAJ_G0011447.1 mouse_genomes_project 2 42578003 42578967 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0059256.1 MGP_CBAJ_G0026666.1 mouse_genomes_project 2 193157281 193226956 + MGP_CBAJ_P0059256 Zfp831 protein_coding protein_coding MGP_CBAJ_T0001057.1 MGP_CBAJ_G0000989.1 mouse_genomes_project 2 126869587 126870520 - TEC TEC MGP_CBAJ_T0058927.1 MGP_CBAJ_G0026589.1 mouse_genomes_project 2 182310385 182389512 - MGP_CBAJ_P0058927 Slc13a3 protein_coding protein_coding MGP_CBAJ_T0058928.1 MGP_CBAJ_G0026589.1 mouse_genomes_project 2 182310652 182389512 - MGP_CBAJ_P0058928 Slc13a3 protein_coding protein_coding MGP_CBAJ_T0058929.1 MGP_CBAJ_G0026589.1 mouse_genomes_project 2 182312062 182314417 - Slc13a3 protein_coding retained_intron MGP_CBAJ_T0058930.1 MGP_CBAJ_G0026589.1 mouse_genomes_project 2 182317234 182325653 - Slc13a3 protein_coding retained_intron MGP_CBAJ_T0058931.1 MGP_CBAJ_G0026589.1 mouse_genomes_project 2 182357234 182389481 - Slc13a3 protein_coding retained_intron MGP_CBAJ_T0058163.1 MGP_CBAJ_G0026425.1 mouse_genomes_project 2 170734120 170747919 + Dynlrb1 protein_coding processed_transcript MGP_CBAJ_T0058164.1 MGP_CBAJ_G0026425.1 mouse_genomes_project 2 170734122 170747924 + MGP_CBAJ_P0058164 Dynlrb1 protein_coding protein_coding MGP_CBAJ_T0058165.1 MGP_CBAJ_G0026425.1 mouse_genomes_project 2 170734195 170747782 + MGP_CBAJ_P0058165 Dynlrb1 protein_coding protein_coding MGP_CBAJ_T0058166.1 MGP_CBAJ_G0026425.1 mouse_genomes_project 2 170734398 170747727 + Dynlrb1 protein_coding processed_transcript MGP_CBAJ_T0057934.1 MGP_CBAJ_G0026357.1 mouse_genomes_project 2 167506151 167514459 - MGP_CBAJ_P0057934 Defb23 protein_coding protein_coding MGP_CBAJ_T0053866.1 MGP_CBAJ_G0025337.1 mouse_genomes_project 2 33451713 33515520 - MGP_CBAJ_P0053866 Stxbp1 protein_coding protein_coding MGP_CBAJ_T0053867.1 MGP_CBAJ_G0025337.1 mouse_genomes_project 2 33451718 33481275 - Stxbp1 protein_coding processed_transcript MGP_CBAJ_T0053868.1 MGP_CBAJ_G0025337.1 mouse_genomes_project 2 33452072 33515477 - MGP_CBAJ_P0053868 Stxbp1 protein_coding protein_coding MGP_CBAJ_T0053869.1 MGP_CBAJ_G0025337.1 mouse_genomes_project 2 33480598 33481681 - Stxbp1 protein_coding retained_intron MGP_CBAJ_T0013370.1 MGP_CBAJ_G0011482.1 mouse_genomes_project 2 59187153 59189451 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057313.1 MGP_CBAJ_G0026205.1 mouse_genomes_project 2 143155766 143263412 + MGP_CBAJ_P0057313 Ptpra protein_coding protein_coding MGP_CBAJ_T0057314.1 MGP_CBAJ_G0026205.1 mouse_genomes_project 2 143182124 143262857 + MGP_CBAJ_P0057314 Ptpra protein_coding protein_coding MGP_CBAJ_T0098314.1 MGP_CBAJ_G0036581.1 mouse_genomes_project 2 148968412 148969385 + Gm14209 sense_intronic sense_intronic MGP_CBAJ_T0058335.1 MGP_CBAJ_G0026452.1 mouse_genomes_project 2 171700021 171729693 - MGP_CBAJ_P0058335 Rbm12 protein_coding protein_coding MGP_CBAJ_T0058336.1 MGP_CBAJ_G0026452.1 mouse_genomes_project 2 171700021 171729693 - MGP_CBAJ_P0058336 Rbm12 protein_coding protein_coding MGP_CBAJ_T0058337.1 MGP_CBAJ_G0026452.1 mouse_genomes_project 2 171705578 171729653 - MGP_CBAJ_P0058337 Rbm12 protein_coding protein_coding MGP_CBAJ_T0058338.1 MGP_CBAJ_G0026452.1 mouse_genomes_project 2 171706014 171729715 - MGP_CBAJ_P0058338 Rbm12 protein_coding protein_coding MGP_CBAJ_T0058339.1 MGP_CBAJ_G0026452.1 mouse_genomes_project 2 171706043 171729698 - MGP_CBAJ_P0058339 Rbm12 protein_coding protein_coding MGP_CBAJ_T0059191.1 MGP_CBAJ_G0026649.1 mouse_genomes_project 2 191477212 191483416 + MGP_CBAJ_P0059191 Pck1 protein_coding protein_coding MGP_CBAJ_T0059192.1 MGP_CBAJ_G0026649.1 mouse_genomes_project 2 191477237 191478974 + Pck1 protein_coding processed_transcript MGP_CBAJ_T0059193.1 MGP_CBAJ_G0026649.1 mouse_genomes_project 2 191477237 191478624 + Pck1 protein_coding retained_intron MGP_CBAJ_T0059194.1 MGP_CBAJ_G0026649.1 mouse_genomes_project 2 191477246 191483414 + Pck1 protein_coding retained_intron MGP_CBAJ_T0003880.1 MGP_CBAJ_G0003463.1 mouse_genomes_project 2 34416127 34417528 + C130021I20Rik antisense antisense MGP_CBAJ_T0003881.1 MGP_CBAJ_G0003463.1 mouse_genomes_project 2 34416265 34421289 + C130021I20Rik antisense antisense MGP_CBAJ_T0056483.1 MGP_CBAJ_G0026027.1 mouse_genomes_project 2 130279373 130288100 + MGP_CBAJ_P0056483 Rad51 protein_coding protein_coding MGP_CBAJ_T0056484.1 MGP_CBAJ_G0026027.1 mouse_genomes_project 2 130279387 130304142 + MGP_CBAJ_P0056484 Rad51 protein_coding protein_coding MGP_CBAJ_T0056485.1 MGP_CBAJ_G0026027.1 mouse_genomes_project 2 130279394 130300453 + Rad51 protein_coding retained_intron MGP_CBAJ_T0056486.1 MGP_CBAJ_G0026027.1 mouse_genomes_project 2 130279397 130303890 + MGP_CBAJ_P0056486 Rad51 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056487.1 MGP_CBAJ_G0026027.1 mouse_genomes_project 2 130285064 130286516 + Rad51 protein_coding retained_intron MGP_CBAJ_T0056488.1 MGP_CBAJ_G0026027.1 mouse_genomes_project 2 130288056 130318225 + MGP_CBAJ_P0056488 Rad51 protein_coding protein_coding MGP_CBAJ_T0056489.1 MGP_CBAJ_G0026027.1 mouse_genomes_project 2 130298363 130301313 + Rad51 protein_coding retained_intron MGP_CBAJ_T0056490.1 MGP_CBAJ_G0026027.1 mouse_genomes_project 2 130301019 130302066 + Rad51 protein_coding retained_intron MGP_CBAJ_T0053339.1 MGP_CBAJ_G0025260.1 mouse_genomes_project 2 30028808 30060774 + MGP_CBAJ_P0053339 Gle1 protein_coding protein_coding MGP_CBAJ_T0053340.1 MGP_CBAJ_G0025260.1 mouse_genomes_project 2 30028810 30032256 + Gle1 protein_coding retained_intron MGP_CBAJ_T0053341.1 MGP_CBAJ_G0025260.1 mouse_genomes_project 2 30028905 30032796 + Gle1 protein_coding retained_intron MGP_CBAJ_T0053342.1 MGP_CBAJ_G0025260.1 mouse_genomes_project 2 30037712 30039138 + Gle1 protein_coding retained_intron MGP_CBAJ_T0053343.1 MGP_CBAJ_G0025260.1 mouse_genomes_project 2 30038075 30040115 + Gle1 protein_coding retained_intron MGP_CBAJ_T0053344.1 MGP_CBAJ_G0025260.1 mouse_genomes_project 2 30044366 30048164 + Gle1 protein_coding retained_intron MGP_CBAJ_T0053345.1 MGP_CBAJ_G0025260.1 mouse_genomes_project 2 30055914 30058620 + Gle1 protein_coding retained_intron MGP_CBAJ_T0055161.1 MGP_CBAJ_G0025589.1 mouse_genomes_project 2 85092774 85095201 + Itga4 protein_coding processed_transcript MGP_CBAJ_T0055162.1 MGP_CBAJ_G0025589.1 mouse_genomes_project 2 85092848 85186027 + MGP_CBAJ_P0055162 Itga4 protein_coding protein_coding MGP_CBAJ_T0055163.1 MGP_CBAJ_G0025589.1 mouse_genomes_project 2 85092920 85111326 + Itga4 protein_coding processed_transcript MGP_CBAJ_T0055164.1 MGP_CBAJ_G0025589.1 mouse_genomes_project 2 85093069 85137555 + Itga4 protein_coding processed_transcript MGP_CBAJ_T0055165.1 MGP_CBAJ_G0025589.1 mouse_genomes_project 2 85093295 85137259 + Itga4 protein_coding processed_transcript MGP_CBAJ_T0052480.1 MGP_CBAJ_G0025105.1 mouse_genomes_project 2 22040032 22057800 + Pdss1 protein_coding processed_transcript MGP_CBAJ_T0052481.1 MGP_CBAJ_G0025105.1 mouse_genomes_project 2 22040032 22090263 + MGP_CBAJ_P0052481 Pdss1 protein_coding protein_coding MGP_CBAJ_T0052482.1 MGP_CBAJ_G0025105.1 mouse_genomes_project 2 22040105 22061314 + MGP_CBAJ_P0052482 Pdss1 protein_coding protein_coding MGP_CBAJ_T0052483.1 MGP_CBAJ_G0025105.1 mouse_genomes_project 2 22040129 22046931 + MGP_CBAJ_P0052483 Pdss1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052484.1 MGP_CBAJ_G0025105.1 mouse_genomes_project 2 22040558 22051925 + MGP_CBAJ_P0052484 Pdss1 protein_coding protein_coding MGP_CBAJ_T0052485.1 MGP_CBAJ_G0025105.1 mouse_genomes_project 2 22084120 22090252 + Pdss1 protein_coding retained_intron MGP_CBAJ_T0052486.1 MGP_CBAJ_G0025105.1 mouse_genomes_project 2 22085556 22090239 + MGP_CBAJ_P0052486 Pdss1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0004065.1 MGP_CBAJ_G0003593.1 mouse_genomes_project 2 172017373 172018443 - Gm14170 antisense antisense MGP_CBAJ_T0055502.1 MGP_CBAJ_G0025765.1 mouse_genomes_project 2 96072007 96072934 - MGP_CBAJ_P0055502 Olfr1195 protein_coding protein_coding MGP_CBAJ_T0010238.1 MGP_CBAJ_G0008376.1 mouse_genomes_project 2 8395054 8395152 + Mir669m-2 miRNA miRNA MGP_CBAJ_T0013374.1 MGP_CBAJ_G0011486.1 mouse_genomes_project 2 60639800 60642559 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010320.1 MGP_CBAJ_G0008458.1 mouse_genomes_project 2 123034774 123034914 + Gm44374 miRNA miRNA MGP_CBAJ_T0056436.1 MGP_CBAJ_G0026015.1 mouse_genomes_project 2 129829455 129834316 - MGP_CBAJ_P0056436 Ankrd63 protein_coding protein_coding MGP_CBAJ_T0055377.1 MGP_CBAJ_G0025654.1 mouse_genomes_project 2 92520092 92521028 + MGP_CBAJ_P0055377 Olfr1023 protein_coding protein_coding MGP_CBAJ_T0101817.1 MGP_CBAJ_G0039848.1 mouse_genomes_project 2 96003579 96004561 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0054776.1 MGP_CBAJ_G0025512.1 mouse_genomes_project 2 74365808 74392044 + MGP_CBAJ_P0054776 Bbs5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054777.1 MGP_CBAJ_G0025512.1 mouse_genomes_project 2 74365845 74392297 + MGP_CBAJ_P0054777 Bbs5 protein_coding protein_coding MGP_CBAJ_T0054778.1 MGP_CBAJ_G0025512.1 mouse_genomes_project 2 74365853 74392297 + MGP_CBAJ_P0054778 Bbs5 protein_coding protein_coding MGP_CBAJ_T0054779.1 MGP_CBAJ_G0025512.1 mouse_genomes_project 2 74365867 74370930 + Bbs5 protein_coding retained_intron MGP_CBAJ_T0054780.1 MGP_CBAJ_G0025512.1 mouse_genomes_project 2 74365890 74375558 + Bbs5 protein_coding retained_intron MGP_CBAJ_T0054781.1 MGP_CBAJ_G0025512.1 mouse_genomes_project 2 74365900 74374400 + Bbs5 protein_coding retained_intron MGP_CBAJ_T0054782.1 MGP_CBAJ_G0025512.1 mouse_genomes_project 2 74376733 74389754 + Bbs5 protein_coding retained_intron MGP_CBAJ_T0054783.1 MGP_CBAJ_G0025512.1 mouse_genomes_project 2 74378322 74392297 + MGP_CBAJ_P0054783 Bbs5 protein_coding protein_coding MGP_CBAJ_T0053761.1 MGP_CBAJ_G0025319.1 mouse_genomes_project 2 33012534 33053219 - MGP_CBAJ_P0053761 Slc25a25 protein_coding protein_coding MGP_CBAJ_T0053762.1 MGP_CBAJ_G0025319.1 mouse_genomes_project 2 33012534 33029167 - MGP_CBAJ_P0053762 Slc25a25 protein_coding protein_coding MGP_CBAJ_T0053763.1 MGP_CBAJ_G0025319.1 mouse_genomes_project 2 33012537 33053242 - MGP_CBAJ_P0053763 Slc25a25 protein_coding protein_coding MGP_CBAJ_T0053764.1 MGP_CBAJ_G0025319.1 mouse_genomes_project 2 33013017 33028800 - MGP_CBAJ_P0053764 Slc25a25 protein_coding protein_coding MGP_CBAJ_T0053765.1 MGP_CBAJ_G0025319.1 mouse_genomes_project 2 33013107 33022053 - MGP_CBAJ_P0053765 Slc25a25 protein_coding protein_coding MGP_CBAJ_T0053766.1 MGP_CBAJ_G0025319.1 mouse_genomes_project 2 33014256 33014619 - Slc25a25 protein_coding retained_intron MGP_CBAJ_T0053767.1 MGP_CBAJ_G0025319.1 mouse_genomes_project 2 33015139 33018498 - Slc25a25 protein_coding retained_intron MGP_CBAJ_T0053768.1 MGP_CBAJ_G0025319.1 mouse_genomes_project 2 33015219 33015878 - Slc25a25 protein_coding retained_intron MGP_CBAJ_T0053769.1 MGP_CBAJ_G0025319.1 mouse_genomes_project 2 33015465 33029153 - MGP_CBAJ_P0053769 Slc25a25 protein_coding protein_coding MGP_CBAJ_T0053770.1 MGP_CBAJ_G0025319.1 mouse_genomes_project 2 33017095 33020028 - MGP_CBAJ_P0053770 Slc25a25 protein_coding protein_coding MGP_CBAJ_T0053771.1 MGP_CBAJ_G0025319.1 mouse_genomes_project 2 33017177 33029152 - MGP_CBAJ_P0053771 Slc25a25 protein_coding protein_coding MGP_CBAJ_T0053772.1 MGP_CBAJ_G0025319.1 mouse_genomes_project 2 33025396 33029217 - Slc25a25 protein_coding retained_intron MGP_CBAJ_T0057280.1 MGP_CBAJ_G0026197.1 mouse_genomes_project 2 142976345 142981563 - MGP_CBAJ_P0057280 Idh3b protein_coding protein_coding MGP_CBAJ_T0057281.1 MGP_CBAJ_G0026197.1 mouse_genomes_project 2 142976348 142977577 - MGP_CBAJ_P0057281 Idh3b protein_coding nonsense_mediated_decay MGP_CBAJ_T0057282.1 MGP_CBAJ_G0026197.1 mouse_genomes_project 2 142979166 142981450 - Idh3b protein_coding retained_intron MGP_CBAJ_T0057283.1 MGP_CBAJ_G0026197.1 mouse_genomes_project 2 142980678 142981431 - Idh3b protein_coding retained_intron MGP_CBAJ_T0052476.1 MGP_CBAJ_G0025104.1 mouse_genomes_project 2 21903236 21976738 + Apbb1ip protein_coding processed_transcript MGP_CBAJ_T0052477.1 MGP_CBAJ_G0025104.1 mouse_genomes_project 2 21903236 22012401 + MGP_CBAJ_P0052477 Apbb1ip protein_coding protein_coding MGP_CBAJ_T0052478.1 MGP_CBAJ_G0025104.1 mouse_genomes_project 2 21903532 21993002 + Apbb1ip protein_coding processed_transcript MGP_CBAJ_T0052479.1 MGP_CBAJ_G0025104.1 mouse_genomes_project 2 21903587 21969218 + Apbb1ip protein_coding retained_intron MGP_CBAJ_T0052686.1 MGP_CBAJ_G0025143.1 mouse_genomes_project 2 24684101 24694664 - MGP_CBAJ_P0052686 Ndor1 protein_coding protein_coding MGP_CBAJ_T0052687.1 MGP_CBAJ_G0025143.1 mouse_genomes_project 2 24684143 24694667 - MGP_CBAJ_P0052687 Ndor1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052688.1 MGP_CBAJ_G0025143.1 mouse_genomes_project 2 24684850 24687267 - Ndor1 protein_coding processed_transcript MGP_CBAJ_T0052689.1 MGP_CBAJ_G0025143.1 mouse_genomes_project 2 24686509 24694690 - MGP_CBAJ_P0052689 Ndor1 protein_coding protein_coding MGP_CBAJ_T0052690.1 MGP_CBAJ_G0025143.1 mouse_genomes_project 2 24686708 24694667 - MGP_CBAJ_P0052690 Ndor1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052691.1 MGP_CBAJ_G0025143.1 mouse_genomes_project 2 24686867 24687752 - Ndor1 protein_coding retained_intron MGP_CBAJ_T0052692.1 MGP_CBAJ_G0025143.1 mouse_genomes_project 2 24688752 24694627 - MGP_CBAJ_P0052692 Ndor1 protein_coding protein_coding MGP_CBAJ_T0052693.1 MGP_CBAJ_G0025143.1 mouse_genomes_project 2 24688780 24689623 - Ndor1 protein_coding retained_intron MGP_CBAJ_T0052694.1 MGP_CBAJ_G0025143.1 mouse_genomes_project 2 24689404 24694697 - MGP_CBAJ_P0052694 Ndor1 protein_coding protein_coding MGP_CBAJ_T0052695.1 MGP_CBAJ_G0025143.1 mouse_genomes_project 2 24689455 24694649 - Ndor1 protein_coding processed_transcript MGP_CBAJ_T0052696.1 MGP_CBAJ_G0025143.1 mouse_genomes_project 2 24690768 24694542 - Ndor1 protein_coding retained_intron MGP_CBAJ_T0052697.1 MGP_CBAJ_G0025143.1 mouse_genomes_project 2 24691028 24695303 - MGP_CBAJ_P0052697 Ndor1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056284.1 MGP_CBAJ_G0025966.1 mouse_genomes_project 2 121909957 121910896 - MGP_CBAJ_P0056284 protein_coding protein_coding MGP_CBAJ_T0013640.1 MGP_CBAJ_G0011752.1 mouse_genomes_project 2 167517170 167517653 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0056997.1 MGP_CBAJ_G0026127.1 mouse_genomes_project 2 137389744 137610526 - MGP_CBAJ_P0056997 Fbn1 protein_coding protein_coding MGP_CBAJ_T0056998.1 MGP_CBAJ_G0026127.1 mouse_genomes_project 2 137389777 137612136 - MGP_CBAJ_P0056998 Fbn1 protein_coding protein_coding MGP_CBAJ_T0056999.1 MGP_CBAJ_G0026127.1 mouse_genomes_project 2 137482388 137610213 - Fbn1 protein_coding retained_intron MGP_CBAJ_T0010357.1 MGP_CBAJ_G0008495.1 mouse_genomes_project 2 185668963 185669058 - Gm24561 miRNA miRNA MGP_CBAJ_T0054818.1 MGP_CBAJ_G0025520.1 mouse_genomes_project 2 74640309 74654062 - MGP_CBAJ_P0054818 Mettl5 protein_coding protein_coding MGP_CBAJ_T0054819.1 MGP_CBAJ_G0025520.1 mouse_genomes_project 2 74640325 74654044 - MGP_CBAJ_P0054819 Mettl5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054820.1 MGP_CBAJ_G0025520.1 mouse_genomes_project 2 74640329 74642927 - Mettl5 protein_coding retained_intron MGP_CBAJ_T0054821.1 MGP_CBAJ_G0025520.1 mouse_genomes_project 2 74646199 74654051 - Mettl5 protein_coding retained_intron MGP_CBAJ_T0098301.1 MGP_CBAJ_G0036568.1 mouse_genomes_project 2 337980 340818 - Gm37525 sense_intronic sense_intronic MGP_CBAJ_T0056566.1 MGP_CBAJ_G0026049.1 mouse_genomes_project 2 131061284 131084892 + MGP_CBAJ_P0056566 Tyro3 protein_coding protein_coding MGP_CBAJ_T0056567.1 MGP_CBAJ_G0026049.1 mouse_genomes_project 2 131062782 131072422 + Tyro3 protein_coding processed_transcript MGP_CBAJ_T0056568.1 MGP_CBAJ_G0026049.1 mouse_genomes_project 2 131062870 131070107 + Tyro3 protein_coding processed_transcript MGP_CBAJ_T0056569.1 MGP_CBAJ_G0026049.1 mouse_genomes_project 2 131063057 131084892 + MGP_CBAJ_P0056569 Tyro3 protein_coding protein_coding MGP_CBAJ_T0056570.1 MGP_CBAJ_G0026049.1 mouse_genomes_project 2 131067879 131070065 + Tyro3 protein_coding processed_transcript MGP_CBAJ_T0056571.1 MGP_CBAJ_G0026049.1 mouse_genomes_project 2 131069858 131074765 + Tyro3 protein_coding retained_intron MGP_CBAJ_T0056572.1 MGP_CBAJ_G0026049.1 mouse_genomes_project 2 131075981 131084879 + Tyro3 protein_coding retained_intron MGP_CBAJ_T0056573.1 MGP_CBAJ_G0026049.1 mouse_genomes_project 2 131077617 131079163 + Tyro3 protein_coding retained_intron MGP_CBAJ_T0007020.1 MGP_CBAJ_G0005755.1 mouse_genomes_project 2 902228 927399 + Gm13180 lincRNA lincRNA MGP_CBAJ_T0013285.1 MGP_CBAJ_G0011397.1 mouse_genomes_project 2 22945748 22946652 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013516.1 MGP_CBAJ_G0011628.1 mouse_genomes_project 2 113076036 113076510 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0054087.1 MGP_CBAJ_G0025369.1 mouse_genomes_project 2 36761626 37019264 - MGP_CBAJ_P0054087 Ttll11 protein_coding protein_coding MGP_CBAJ_T0054088.1 MGP_CBAJ_G0025369.1 mouse_genomes_project 2 36761637 37019630 - MGP_CBAJ_P0054088 Ttll11 protein_coding protein_coding MGP_CBAJ_T0054089.1 MGP_CBAJ_G0025369.1 mouse_genomes_project 2 36761637 37019630 - MGP_CBAJ_P0054089 Ttll11 protein_coding protein_coding MGP_CBAJ_T0054090.1 MGP_CBAJ_G0025369.1 mouse_genomes_project 2 36762058 37019772 - MGP_CBAJ_P0054090 Ttll11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054091.1 MGP_CBAJ_G0025369.1 mouse_genomes_project 2 36804894 36908545 - Ttll11 protein_coding processed_transcript MGP_CBAJ_T0054092.1 MGP_CBAJ_G0025369.1 mouse_genomes_project 2 36918945 36980291 - Ttll11 protein_coding processed_transcript MGP_CBAJ_T0054093.1 MGP_CBAJ_G0025369.1 mouse_genomes_project 2 36932010 37019919 - Ttll11 protein_coding processed_transcript MGP_CBAJ_T0054094.1 MGP_CBAJ_G0025369.1 mouse_genomes_project 2 36932305 36988970 - MGP_CBAJ_P0054094 Ttll11 protein_coding protein_coding MGP_CBAJ_T0054095.1 MGP_CBAJ_G0025369.1 mouse_genomes_project 2 36932325 36990830 - MGP_CBAJ_P0054095 Ttll11 protein_coding protein_coding MGP_CBAJ_T0054637.1 MGP_CBAJ_G0025484.1 mouse_genomes_project 2 66554718 66609774 - MGP_CBAJ_P0054637 Ifih1 protein_coding protein_coding MGP_CBAJ_T0054638.1 MGP_CBAJ_G0025484.1 mouse_genomes_project 2 66556367 66609716 - MGP_CBAJ_P0054638 Ifih1 protein_coding protein_coding MGP_CBAJ_T0054639.1 MGP_CBAJ_G0025484.1 mouse_genomes_project 2 66567092 66609818 - Ifih1 protein_coding retained_intron MGP_CBAJ_T0054640.1 MGP_CBAJ_G0025484.1 mouse_genomes_project 2 66590887 66603036 - Ifih1 protein_coding processed_transcript MGP_CBAJ_T0054641.1 MGP_CBAJ_G0025484.1 mouse_genomes_project 2 66594922 66609721 - Ifih1 protein_coding retained_intron MGP_CBAJ_T0099125.1 MGP_CBAJ_G0037380.1 mouse_genomes_project 2 134015015 134015167 - Gm24409 snRNA snRNA MGP_CBAJ_T0004083.1 MGP_CBAJ_G0003607.1 mouse_genomes_project 2 180789724 180810427 + A730032A03Rik antisense antisense MGP_CBAJ_T0004084.1 MGP_CBAJ_G0003607.1 mouse_genomes_project 2 180805158 180810427 + A730032A03Rik antisense antisense MGP_CBAJ_T0007333.1 MGP_CBAJ_G0006008.1 mouse_genomes_project 2 199282545 199297747 - B230312C02Rik lincRNA lincRNA MGP_CBAJ_T0010323.1 MGP_CBAJ_G0008461.1 mouse_genomes_project 2 128119343 128119443 + Mir674 miRNA miRNA MGP_CBAJ_T0011380.1 MGP_CBAJ_G0009518.1 mouse_genomes_project 2 114601448 114601570 - Gm27636 misc_RNA misc_RNA MGP_CBAJ_T0100372.1 MGP_CBAJ_G0038627.1 mouse_genomes_project 2 71877820 71877952 + Gm23328 snoRNA snoRNA MGP_CBAJ_T0098198.1 MGP_CBAJ_G0036471.1 mouse_genomes_project 2 172743638 172743774 - Gm27653 scaRNA scaRNA MGP_CBAJ_T0013387.1 MGP_CBAJ_G0011499.1 mouse_genomes_project 2 64304861 64306003 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010339.1 MGP_CBAJ_G0008477.1 mouse_genomes_project 2 158760995 158761086 - Gm24823 miRNA miRNA MGP_CBAJ_T0010370.1 MGP_CBAJ_G0008508.1 mouse_genomes_project 2 200641324 200641393 - Mir7006 miRNA miRNA MGP_CBAJ_T0010343.1 MGP_CBAJ_G0008481.1 mouse_genomes_project 2 167876065 167876150 - Gm23802 miRNA miRNA MGP_CBAJ_T0054809.1 MGP_CBAJ_G0025518.1 mouse_genomes_project 2 74583094 74585475 + Klhl23 protein_coding processed_transcript MGP_CBAJ_T0054810.1 MGP_CBAJ_G0025518.1 mouse_genomes_project 2 74583520 74600114 + MGP_CBAJ_P0054810 Klhl23 protein_coding protein_coding MGP_CBAJ_T0054811.1 MGP_CBAJ_G0025518.1 mouse_genomes_project 2 74585505 74587396 + Klhl23 protein_coding processed_transcript MGP_CBAJ_T0052711.1 MGP_CBAJ_G0025148.1 mouse_genomes_project 2 24727757 24728800 + MGP_CBAJ_P0052711 Tmem210 protein_coding protein_coding MGP_CBAJ_T0052712.1 MGP_CBAJ_G0025148.1 mouse_genomes_project 2 24727813 24728802 + Tmem210 protein_coding processed_transcript MGP_CBAJ_T0013336.1 MGP_CBAJ_G0011448.1 mouse_genomes_project 2 42619546 42619899 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0054873.1 MGP_CBAJ_G0025530.1 mouse_genomes_project 2 75978305 76009199 + MGP_CBAJ_P0054873 Dcaf17 protein_coding protein_coding MGP_CBAJ_T0054874.1 MGP_CBAJ_G0025530.1 mouse_genomes_project 2 75978735 76000745 + MGP_CBAJ_P0054874 Dcaf17 protein_coding protein_coding MGP_CBAJ_T0054875.1 MGP_CBAJ_G0025530.1 mouse_genomes_project 2 75978823 76015422 + MGP_CBAJ_P0054875 Dcaf17 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054876.1 MGP_CBAJ_G0025530.1 mouse_genomes_project 2 75978829 76011225 + MGP_CBAJ_P0054876 Dcaf17 protein_coding protein_coding MGP_CBAJ_T0054877.1 MGP_CBAJ_G0025530.1 mouse_genomes_project 2 75978971 76015073 + MGP_CBAJ_P0054877 Dcaf17 protein_coding protein_coding MGP_CBAJ_T0054878.1 MGP_CBAJ_G0025530.1 mouse_genomes_project 2 75997922 76004634 + Dcaf17 protein_coding processed_transcript MGP_CBAJ_T0053818.1 MGP_CBAJ_G0025329.1 mouse_genomes_project 2 33330433 33344032 - MGP_CBAJ_P0053818 Fpgs protein_coding protein_coding MGP_CBAJ_T0053819.1 MGP_CBAJ_G0025329.1 mouse_genomes_project 2 33330434 33343982 - Fpgs protein_coding retained_intron MGP_CBAJ_T0053820.1 MGP_CBAJ_G0025329.1 mouse_genomes_project 2 33330641 33333781 - Fpgs protein_coding retained_intron MGP_CBAJ_T0053821.1 MGP_CBAJ_G0025329.1 mouse_genomes_project 2 33331126 33332829 - Fpgs protein_coding processed_transcript MGP_CBAJ_T0053822.1 MGP_CBAJ_G0025329.1 mouse_genomes_project 2 33334326 33335327 - Fpgs protein_coding retained_intron MGP_CBAJ_T0053823.1 MGP_CBAJ_G0025329.1 mouse_genomes_project 2 33334673 33358890 - MGP_CBAJ_P0053823 Fpgs protein_coding nonsense_mediated_decay MGP_CBAJ_T0053824.1 MGP_CBAJ_G0025329.1 mouse_genomes_project 2 33334838 33335662 - Fpgs protein_coding retained_intron MGP_CBAJ_T0053825.1 MGP_CBAJ_G0025329.1 mouse_genomes_project 2 33335240 33358898 - MGP_CBAJ_P0053825 Fpgs protein_coding protein_coding MGP_CBAJ_T0053826.1 MGP_CBAJ_G0025329.1 mouse_genomes_project 2 33342297 33343091 - Fpgs protein_coding retained_intron MGP_CBAJ_T0053827.1 MGP_CBAJ_G0025329.1 mouse_genomes_project 2 33342559 33358784 - MGP_CBAJ_P0053827 Fpgs protein_coding protein_coding MGP_CBAJ_T0001007.1 MGP_CBAJ_G0000939.1 mouse_genomes_project 2 11410269 11412142 - TEC TEC MGP_CBAJ_T0054455.1 MGP_CBAJ_G0025455.1 mouse_genomes_project 2 60468447 60476410 - MGP_CBAJ_P0054455 Nr4a2 protein_coding protein_coding MGP_CBAJ_T0054456.1 MGP_CBAJ_G0025455.1 mouse_genomes_project 2 60468451 60490595 - MGP_CBAJ_P0054456 Nr4a2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054457.1 MGP_CBAJ_G0025455.1 mouse_genomes_project 2 60473626 60476681 - Nr4a2 protein_coding processed_transcript MGP_CBAJ_T0054458.1 MGP_CBAJ_G0025455.1 mouse_genomes_project 2 60474615 60476016 - Nr4a2 protein_coding processed_transcript MGP_CBAJ_T0057911.1 MGP_CBAJ_G0026350.1 mouse_genomes_project 2 167306891 167336863 + MGP_CBAJ_P0057911 Tbc1d20 protein_coding protein_coding MGP_CBAJ_T0057912.1 MGP_CBAJ_G0026350.1 mouse_genomes_project 2 167306914 167321573 + MGP_CBAJ_P0057912 Tbc1d20 protein_coding protein_coding MGP_CBAJ_T0057913.1 MGP_CBAJ_G0026350.1 mouse_genomes_project 2 167306935 167336863 + Tbc1d20 protein_coding retained_intron MGP_CBAJ_T0057914.1 MGP_CBAJ_G0026350.1 mouse_genomes_project 2 167307243 167321919 + MGP_CBAJ_P0057914 Tbc1d20 protein_coding protein_coding MGP_CBAJ_T0057915.1 MGP_CBAJ_G0026350.1 mouse_genomes_project 2 167321689 167333685 + Tbc1d20 protein_coding retained_intron MGP_CBAJ_T0058229.1 MGP_CBAJ_G0026436.1 mouse_genomes_project 2 171285070 171285127 - MGP_CBAJ_P0058229 Gm17581 protein_coding protein_coding MGP_CBAJ_T0052288.1 MGP_CBAJ_G0025070.1 mouse_genomes_project 2 11938903 12095486 - MGP_CBAJ_P0052288 St8sia6 protein_coding protein_coding MGP_CBAJ_T0052289.1 MGP_CBAJ_G0025070.1 mouse_genomes_project 2 11945036 12094715 - St8sia6 protein_coding processed_transcript MGP_CBAJ_T0100396.1 MGP_CBAJ_G0038651.1 mouse_genomes_project 2 142972428 142973543 + Gm23187 snoRNA snoRNA MGP_CBAJ_T0056110.1 MGP_CBAJ_G0025912.1 mouse_genomes_project 2 113403730 113422123 + MGP_CBAJ_P0056110 Cd59a protein_coding protein_coding MGP_CBAJ_T0056111.1 MGP_CBAJ_G0025912.1 mouse_genomes_project 2 113403730 113422128 + MGP_CBAJ_P0056111 Cd59a protein_coding protein_coding MGP_CBAJ_T0056112.1 MGP_CBAJ_G0025912.1 mouse_genomes_project 2 113403769 113421042 + Cd59a protein_coding processed_transcript MGP_CBAJ_T0053400.1 MGP_CBAJ_G0025269.1 mouse_genomes_project 2 30323609 30328586 - D2Wsu81e protein_coding retained_intron MGP_CBAJ_T0053401.1 MGP_CBAJ_G0025269.1 mouse_genomes_project 2 30323609 30328599 - D2Wsu81e protein_coding retained_intron MGP_CBAJ_T0053402.1 MGP_CBAJ_G0025269.1 mouse_genomes_project 2 30323624 30327662 - D2Wsu81e protein_coding retained_intron MGP_CBAJ_T0053403.1 MGP_CBAJ_G0025269.1 mouse_genomes_project 2 30323627 30328141 - D2Wsu81e protein_coding retained_intron MGP_CBAJ_T0053404.1 MGP_CBAJ_G0025269.1 mouse_genomes_project 2 30323627 30328607 - MGP_CBAJ_P0053404 D2Wsu81e protein_coding protein_coding MGP_CBAJ_T0053405.1 MGP_CBAJ_G0025269.1 mouse_genomes_project 2 30323629 30328616 - D2Wsu81e protein_coding retained_intron MGP_CBAJ_T0053406.1 MGP_CBAJ_G0025269.1 mouse_genomes_project 2 30325087 30328122 - D2Wsu81e protein_coding processed_transcript MGP_CBAJ_T0053407.1 MGP_CBAJ_G0025269.1 mouse_genomes_project 2 30326519 30328612 - D2Wsu81e protein_coding retained_intron MGP_CBAJ_T0056393.1 MGP_CBAJ_G0026005.1 mouse_genomes_project 2 128190968 128201429 + Fam98b protein_coding retained_intron MGP_CBAJ_T0056394.1 MGP_CBAJ_G0026005.1 mouse_genomes_project 2 128190968 128217767 + MGP_CBAJ_P0056394 Fam98b protein_coding protein_coding MGP_CBAJ_T0056395.1 MGP_CBAJ_G0026005.1 mouse_genomes_project 2 128199966 128201427 + Fam98b protein_coding processed_transcript MGP_CBAJ_T0013542.1 MGP_CBAJ_G0011654.1 mouse_genomes_project 2 122018170 122022764 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0058040.1 MGP_CBAJ_G0026393.1 mouse_genomes_project 2 168930834 168980716 + MGP_CBAJ_P0058040 Dnmt3b protein_coding protein_coding MGP_CBAJ_T0058041.1 MGP_CBAJ_G0026393.1 mouse_genomes_project 2 168930834 168980716 + MGP_CBAJ_P0058041 Dnmt3b protein_coding protein_coding MGP_CBAJ_T0058042.1 MGP_CBAJ_G0026393.1 mouse_genomes_project 2 168930837 168980716 + MGP_CBAJ_P0058042 Dnmt3b protein_coding protein_coding MGP_CBAJ_T0058043.1 MGP_CBAJ_G0026393.1 mouse_genomes_project 2 168930837 168980716 + MGP_CBAJ_P0058043 Dnmt3b protein_coding protein_coding MGP_CBAJ_T0058044.1 MGP_CBAJ_G0026393.1 mouse_genomes_project 2 168930837 168980716 + MGP_CBAJ_P0058044 Dnmt3b protein_coding protein_coding MGP_CBAJ_T0058045.1 MGP_CBAJ_G0026393.1 mouse_genomes_project 2 168930838 168980716 + MGP_CBAJ_P0058045 Dnmt3b protein_coding protein_coding MGP_CBAJ_T0058046.1 MGP_CBAJ_G0026393.1 mouse_genomes_project 2 168930838 168980716 + MGP_CBAJ_P0058046 Dnmt3b protein_coding protein_coding MGP_CBAJ_T0058047.1 MGP_CBAJ_G0026393.1 mouse_genomes_project 2 168930838 168980716 + MGP_CBAJ_P0058047 Dnmt3b protein_coding protein_coding MGP_CBAJ_T0058048.1 MGP_CBAJ_G0026393.1 mouse_genomes_project 2 168930838 168980712 + MGP_CBAJ_P0058048 Dnmt3b protein_coding protein_coding MGP_CBAJ_T0058049.1 MGP_CBAJ_G0026393.1 mouse_genomes_project 2 168931001 168980302 + MGP_CBAJ_P0058049 Dnmt3b protein_coding protein_coding MGP_CBAJ_T0058050.1 MGP_CBAJ_G0026393.1 mouse_genomes_project 2 168956335 168958494 + Dnmt3b protein_coding retained_intron MGP_CBAJ_T0058051.1 MGP_CBAJ_G0026393.1 mouse_genomes_project 2 168959904 168960952 + Dnmt3b protein_coding retained_intron MGP_CBAJ_T0101085.1 MGP_CBAJ_G0039295.1 mouse_genomes_project 2 115076926 115077316 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0055661.1 MGP_CBAJ_G0025839.1 mouse_genomes_project 2 98868565 98879525 - MGP_CBAJ_P0055661 Slc39a13 protein_coding protein_coding MGP_CBAJ_T0055662.1 MGP_CBAJ_G0025839.1 mouse_genomes_project 2 98868565 98879337 - MGP_CBAJ_P0055662 Slc39a13 protein_coding protein_coding MGP_CBAJ_T0055663.1 MGP_CBAJ_G0025839.1 mouse_genomes_project 2 98869648 98879391 - MGP_CBAJ_P0055663 Slc39a13 protein_coding protein_coding MGP_CBAJ_T0055664.1 MGP_CBAJ_G0025839.1 mouse_genomes_project 2 98869896 98872221 - Slc39a13 protein_coding processed_transcript MGP_CBAJ_T0055665.1 MGP_CBAJ_G0025839.1 mouse_genomes_project 2 98869899 98871161 - Slc39a13 protein_coding processed_transcript MGP_CBAJ_T0055666.1 MGP_CBAJ_G0025839.1 mouse_genomes_project 2 98870179 98879406 - Slc39a13 protein_coding processed_transcript MGP_CBAJ_T0055667.1 MGP_CBAJ_G0025839.1 mouse_genomes_project 2 98871415 98872951 - Slc39a13 protein_coding processed_transcript MGP_CBAJ_T0055668.1 MGP_CBAJ_G0025839.1 mouse_genomes_project 2 98872355 98879347 - Slc39a13 protein_coding processed_transcript MGP_CBAJ_T0055669.1 MGP_CBAJ_G0025839.1 mouse_genomes_project 2 98872820 98879295 - MGP_CBAJ_P0055669 Slc39a13 protein_coding protein_coding MGP_CBAJ_T0055670.1 MGP_CBAJ_G0025839.1 mouse_genomes_project 2 98877538 98877979 - Slc39a13 protein_coding processed_transcript MGP_CBAJ_T0055671.1 MGP_CBAJ_G0025839.1 mouse_genomes_project 2 98878225 98879347 - Slc39a13 protein_coding processed_transcript MGP_CBAJ_T0003922.1 MGP_CBAJ_G0003495.1 mouse_genomes_project 2 75353261 75430502 - Gad1os antisense antisense MGP_CBAJ_T0003923.1 MGP_CBAJ_G0003495.1 mouse_genomes_project 2 75353568 75354792 - Gad1os antisense antisense MGP_CBAJ_T0010280.1 MGP_CBAJ_G0008418.1 mouse_genomes_project 2 33367858 33367931 - Mir3960 miRNA miRNA MGP_CBAJ_T0052937.1 MGP_CBAJ_G0025193.1 mouse_genomes_project 2 25823404 25829202 - MGP_CBAJ_P0052937 C030048H21Rik protein_coding protein_coding MGP_CBAJ_T0059296.1 MGP_CBAJ_G0026678.1 mouse_genomes_project 2 198919328 198950928 + protein_coding retained_intron MGP_CBAJ_T0059297.1 MGP_CBAJ_G0026678.1 mouse_genomes_project 2 198919332 198945646 + protein_coding retained_intron MGP_CBAJ_T0059298.1 MGP_CBAJ_G0026678.1 mouse_genomes_project 2 198919332 198950935 + MGP_CBAJ_P0059298 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059299.1 MGP_CBAJ_G0026678.1 mouse_genomes_project 2 198919336 198950807 + MGP_CBAJ_P0059299 protein_coding unknown_likely_coding MGP_CBAJ_T0059300.1 MGP_CBAJ_G0026678.1 mouse_genomes_project 2 198931144 198947929 + protein_coding retained_intron MGP_CBAJ_T0059301.1 MGP_CBAJ_G0026678.1 mouse_genomes_project 2 198948023 198950933 + protein_coding retained_intron MGP_CBAJ_T0058188.1 MGP_CBAJ_G0026430.1 mouse_genomes_project 2 171016063 171042605 - MGP_CBAJ_P0058188 Ggt7 protein_coding protein_coding MGP_CBAJ_T0058189.1 MGP_CBAJ_G0026430.1 mouse_genomes_project 2 171020645 171025067 - Ggt7 protein_coding retained_intron MGP_CBAJ_T0058190.1 MGP_CBAJ_G0026430.1 mouse_genomes_project 2 171021714 171030934 - Ggt7 protein_coding retained_intron MGP_CBAJ_T0058191.1 MGP_CBAJ_G0026430.1 mouse_genomes_project 2 171026667 171034726 - MGP_CBAJ_P0058191 Ggt7 protein_coding protein_coding MGP_CBAJ_T0058192.1 MGP_CBAJ_G0026430.1 mouse_genomes_project 2 171032562 171046210 - MGP_CBAJ_P0058192 Ggt7 protein_coding protein_coding MGP_CBAJ_T0100360.1 MGP_CBAJ_G0038615.1 mouse_genomes_project 2 44681392 44681525 + Gm24350 snoRNA snoRNA MGP_CBAJ_T0001008.1 MGP_CBAJ_G0000940.1 mouse_genomes_project 2 11490023 11491712 - TEC TEC MGP_CBAJ_T0054725.1 MGP_CBAJ_G0025500.1 mouse_genomes_project 2 71906391 71994088 + MGP_CBAJ_P0054725 Xirp2 protein_coding protein_coding MGP_CBAJ_T0054726.1 MGP_CBAJ_G0025500.1 mouse_genomes_project 2 71906391 71994096 + MGP_CBAJ_P0054726 Xirp2 protein_coding protein_coding MGP_CBAJ_T0055419.1 MGP_CBAJ_G0025694.1 mouse_genomes_project 2 93823451 93827783 - MGP_CBAJ_P0055419 protein_coding protein_coding MGP_CBAJ_T0057326.1 MGP_CBAJ_G0026212.1 mouse_genomes_project 2 143390055 143390798 - Ddrgk1 protein_coding retained_intron MGP_CBAJ_T0057327.1 MGP_CBAJ_G0026212.1 mouse_genomes_project 2 143390176 143400599 - MGP_CBAJ_P0057327 Ddrgk1 protein_coding protein_coding MGP_CBAJ_T0057328.1 MGP_CBAJ_G0026212.1 mouse_genomes_project 2 143390215 143393358 - Ddrgk1 protein_coding processed_transcript MGP_CBAJ_T0057329.1 MGP_CBAJ_G0026212.1 mouse_genomes_project 2 143390311 143397743 - MGP_CBAJ_P0057329 Ddrgk1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057330.1 MGP_CBAJ_G0026212.1 mouse_genomes_project 2 143391219 143399821 - Ddrgk1 protein_coding processed_transcript MGP_CBAJ_T0003836.1 MGP_CBAJ_G0003429.1 mouse_genomes_project 2 19475940 19482278 - antisense antisense MGP_CBAJ_T0100343.1 MGP_CBAJ_G0038598.1 mouse_genomes_project 2 22047488 22047608 + Gm25544 snoRNA snoRNA MGP_CBAJ_T0017593.1 MGP_CBAJ_G0015204.1 mouse_genomes_project 2 131557431 131558106 - Gm13997 processed_transcript processed_transcript MGP_CBAJ_T0054064.1 MGP_CBAJ_G0025365.1 mouse_genomes_project 2 36307784 36323903 - MGP_CBAJ_P0054064 4930568D16Rik protein_coding protein_coding MGP_CBAJ_T0013456.1 MGP_CBAJ_G0011568.1 mouse_genomes_project 2 89819226 89819436 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098197.1 MGP_CBAJ_G0036470.1 mouse_genomes_project 2 116508304 116508427 + Gm22813 scaRNA scaRNA MGP_CBAJ_T0013385.1 MGP_CBAJ_G0011497.1 mouse_genomes_project 2 63762641 63762950 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007128.1 MGP_CBAJ_G0005840.1 mouse_genomes_project 2 79193555 79205312 + Gm10822 lincRNA lincRNA MGP_CBAJ_T0052728.1 MGP_CBAJ_G0025151.1 mouse_genomes_project 2 24774457 24792000 + MGP_CBAJ_P0052728 Man1b1 protein_coding protein_coding MGP_CBAJ_T0052729.1 MGP_CBAJ_G0025151.1 mouse_genomes_project 2 24774848 24801145 + MGP_CBAJ_P0052729 Man1b1 protein_coding protein_coding MGP_CBAJ_T0052730.1 MGP_CBAJ_G0025151.1 mouse_genomes_project 2 24774881 24793268 + Man1b1 protein_coding processed_transcript MGP_CBAJ_T0052731.1 MGP_CBAJ_G0025151.1 mouse_genomes_project 2 24774892 24780289 + Man1b1 protein_coding processed_transcript MGP_CBAJ_T0052732.1 MGP_CBAJ_G0025151.1 mouse_genomes_project 2 24780232 24793982 + Man1b1 protein_coding processed_transcript MGP_CBAJ_T0052733.1 MGP_CBAJ_G0025151.1 mouse_genomes_project 2 24793716 24794420 + Man1b1 protein_coding processed_transcript MGP_CBAJ_T0013225.1 MGP_CBAJ_G0011337.1 mouse_genomes_project 2 540371 540687 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0056765.1 MGP_CBAJ_G0026080.1 mouse_genomes_project 2 132591866 132606230 + Tubgcp4 protein_coding processed_transcript MGP_CBAJ_T0056766.1 MGP_CBAJ_G0026080.1 mouse_genomes_project 2 132592380 132620966 + MGP_CBAJ_P0056766 Tubgcp4 protein_coding protein_coding MGP_CBAJ_T0056767.1 MGP_CBAJ_G0026080.1 mouse_genomes_project 2 132592421 132620965 + MGP_CBAJ_P0056767 Tubgcp4 protein_coding protein_coding MGP_CBAJ_T0056768.1 MGP_CBAJ_G0026080.1 mouse_genomes_project 2 132592427 132620966 + MGP_CBAJ_P0056768 Tubgcp4 protein_coding protein_coding MGP_CBAJ_T0056769.1 MGP_CBAJ_G0026080.1 mouse_genomes_project 2 132592452 132620965 + Tubgcp4 protein_coding retained_intron MGP_CBAJ_T0056770.1 MGP_CBAJ_G0026080.1 mouse_genomes_project 2 132592458 132597171 + Tubgcp4 protein_coding processed_transcript MGP_CBAJ_T0056771.1 MGP_CBAJ_G0026080.1 mouse_genomes_project 2 132592480 132616412 + MGP_CBAJ_P0056771 Tubgcp4 protein_coding protein_coding MGP_CBAJ_T0056772.1 MGP_CBAJ_G0026080.1 mouse_genomes_project 2 132592505 132606273 + Tubgcp4 protein_coding processed_transcript MGP_CBAJ_T0056773.1 MGP_CBAJ_G0026080.1 mouse_genomes_project 2 132592794 132608514 + Tubgcp4 protein_coding retained_intron MGP_CBAJ_T0056774.1 MGP_CBAJ_G0026080.1 mouse_genomes_project 2 132594915 132606276 + Tubgcp4 protein_coding processed_transcript MGP_CBAJ_T0056775.1 MGP_CBAJ_G0026080.1 mouse_genomes_project 2 132605412 132606603 + Tubgcp4 protein_coding retained_intron MGP_CBAJ_T0056776.1 MGP_CBAJ_G0026080.1 mouse_genomes_project 2 132609148 132619245 + Tubgcp4 protein_coding retained_intron MGP_CBAJ_T0056777.1 MGP_CBAJ_G0026080.1 mouse_genomes_project 2 132609894 132614204 + Tubgcp4 protein_coding retained_intron MGP_CBAJ_T0056778.1 MGP_CBAJ_G0026080.1 mouse_genomes_project 2 132613737 132618427 + Tubgcp4 protein_coding retained_intron MGP_CBAJ_T0017576.1 MGP_CBAJ_G0015197.1 mouse_genomes_project 2 123895825 123908955 + Gm13965 processed_transcript processed_transcript MGP_CBAJ_T0017534.1 MGP_CBAJ_G0015172.1 mouse_genomes_project 2 81194526 81199802 + E030042O20Rik processed_transcript processed_transcript MGP_CBAJ_T0007182.1 MGP_CBAJ_G0005883.1 mouse_genomes_project 2 113176987 113188068 + Gm13881 lincRNA lincRNA MGP_CBAJ_T0011375.1 MGP_CBAJ_G0009513.1 mouse_genomes_project 2 77428769 77429077 + Zakit misc_RNA misc_RNA MGP_CBAJ_T0052880.1 MGP_CBAJ_G0025180.1 mouse_genomes_project 2 25244712 25247784 + MGP_CBAJ_P0052880 Obp2b protein_coding protein_coding MGP_CBAJ_T0057000.1 MGP_CBAJ_G0026128.1 mouse_genomes_project 2 137609246 137612024 + MGP_CBAJ_P0057000 Gm9913 protein_coding protein_coding MGP_CBAJ_T0007163.1 MGP_CBAJ_G0005871.1 mouse_genomes_project 2 101611956 101629014 + Gm10804 lincRNA lincRNA MGP_CBAJ_T0007164.1 MGP_CBAJ_G0005871.1 mouse_genomes_project 2 101611957 101615865 + Gm10804 lincRNA lincRNA MGP_CBAJ_T0007165.1 MGP_CBAJ_G0005871.1 mouse_genomes_project 2 101611958 101625541 + Gm10804 lincRNA lincRNA MGP_CBAJ_T0007166.1 MGP_CBAJ_G0005871.1 mouse_genomes_project 2 101627580 101627817 + Gm10804 lincRNA lincRNA MGP_CBAJ_T0013559.1 MGP_CBAJ_G0011671.1 mouse_genomes_project 2 132834334 132834581 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013290.1 MGP_CBAJ_G0011402.1 mouse_genomes_project 2 25019904 25020144 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055721.1 MGP_CBAJ_G0025845.1 mouse_genomes_project 2 99033921 99065861 - Ddb2 protein_coding processed_transcript MGP_CBAJ_T0055722.1 MGP_CBAJ_G0025845.1 mouse_genomes_project 2 99033937 99070658 - Ddb2 protein_coding processed_transcript MGP_CBAJ_T0055723.1 MGP_CBAJ_G0025845.1 mouse_genomes_project 2 99033952 99070636 - MGP_CBAJ_P0055723 Ddb2 protein_coding protein_coding MGP_CBAJ_T0055724.1 MGP_CBAJ_G0025845.1 mouse_genomes_project 2 99033970 99070711 - Ddb2 protein_coding processed_transcript MGP_CBAJ_T0055725.1 MGP_CBAJ_G0025845.1 mouse_genomes_project 2 99034205 99070733 - MGP_CBAJ_P0055725 Ddb2 protein_coding protein_coding MGP_CBAJ_T0013243.1 MGP_CBAJ_G0011355.1 mouse_genomes_project 2 8833471 8833892 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057028.1 MGP_CBAJ_G0026136.1 mouse_genomes_project 2 138208238 138209684 + Fgf7 protein_coding processed_transcript MGP_CBAJ_T0057029.1 MGP_CBAJ_G0026136.1 mouse_genomes_project 2 138208238 138274476 + MGP_CBAJ_P0057029 Fgf7 protein_coding protein_coding MGP_CBAJ_T0057030.1 MGP_CBAJ_G0026136.1 mouse_genomes_project 2 138208553 138273812 + MGP_CBAJ_P0057030 Fgf7 protein_coding protein_coding MGP_CBAJ_T0013469.1 MGP_CBAJ_G0011581.1 mouse_genomes_project 2 94329011 94329243 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0053082.1 MGP_CBAJ_G0025214.1 mouse_genomes_project 2 26625395 26641831 - MGP_CBAJ_P0053082 Surf4 protein_coding protein_coding MGP_CBAJ_T0053083.1 MGP_CBAJ_G0025214.1 mouse_genomes_project 2 26627317 26638739 - MGP_CBAJ_P0053083 Surf4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053084.1 MGP_CBAJ_G0025214.1 mouse_genomes_project 2 26630325 26641684 - MGP_CBAJ_P0053084 Surf4 protein_coding protein_coding MGP_CBAJ_T0057356.1 MGP_CBAJ_G0026216.1 mouse_genomes_project 2 143697159 143825068 + MGP_CBAJ_P0057356 Atrn protein_coding protein_coding MGP_CBAJ_T0057357.1 MGP_CBAJ_G0026216.1 mouse_genomes_project 2 143697165 143800384 + Atrn protein_coding retained_intron MGP_CBAJ_T0057358.1 MGP_CBAJ_G0026216.1 mouse_genomes_project 2 143697595 143730906 + Atrn protein_coding retained_intron MGP_CBAJ_T0057359.1 MGP_CBAJ_G0026216.1 mouse_genomes_project 2 143777648 143789440 + Atrn protein_coding retained_intron MGP_CBAJ_T0057360.1 MGP_CBAJ_G0026216.1 mouse_genomes_project 2 143791045 143800416 + Atrn protein_coding retained_intron MGP_CBAJ_T0055400.1 MGP_CBAJ_G0025676.1 mouse_genomes_project 2 93032028 93032967 - MGP_CBAJ_P0055400 Olfr1054 protein_coding protein_coding MGP_CBAJ_T0057564.1 MGP_CBAJ_G0026257.1 mouse_genomes_project 2 149880486 149894092 + protein_coding processed_transcript MGP_CBAJ_T0057565.1 MGP_CBAJ_G0026257.1 mouse_genomes_project 2 149880531 149885324 + protein_coding processed_transcript MGP_CBAJ_T0057566.1 MGP_CBAJ_G0026257.1 mouse_genomes_project 2 149880567 149931980 + MGP_CBAJ_P0057566 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057567.1 MGP_CBAJ_G0026257.1 mouse_genomes_project 2 149880757 149892791 + protein_coding processed_transcript MGP_CBAJ_T0057568.1 MGP_CBAJ_G0026257.1 mouse_genomes_project 2 149894095 149930667 + MGP_CBAJ_P0057568 protein_coding protein_coding MGP_CBAJ_T0057569.1 MGP_CBAJ_G0026257.1 mouse_genomes_project 2 149911075 149938116 + MGP_CBAJ_P0057569 protein_coding unknown_likely_coding MGP_CBAJ_T0057570.1 MGP_CBAJ_G0026257.1 mouse_genomes_project 2 149935206 149936002 + protein_coding processed_transcript MGP_CBAJ_T0057571.1 MGP_CBAJ_G0026257.1 mouse_genomes_project 2 149935221 149938176 + protein_coding processed_transcript MGP_CBAJ_T0059287.1 MGP_CBAJ_G0026675.1 mouse_genomes_project 2 198868349 198878806 + MGP_CBAJ_P0059287 Lsm14b protein_coding protein_coding MGP_CBAJ_T0059288.1 MGP_CBAJ_G0026675.1 mouse_genomes_project 2 198868548 198878804 + MGP_CBAJ_P0059288 Lsm14b protein_coding protein_coding MGP_CBAJ_T0059289.1 MGP_CBAJ_G0026675.1 mouse_genomes_project 2 198871268 198877154 + Lsm14b protein_coding processed_transcript MGP_CBAJ_T0010294.1 MGP_CBAJ_G0008432.1 mouse_genomes_project 2 72253909 72254007 + Mir6335 miRNA miRNA MGP_CBAJ_T0056989.1 MGP_CBAJ_G0026125.1 mouse_genomes_project 2 137235207 137317074 + MGP_CBAJ_P0056989 Slc12a1 protein_coding protein_coding MGP_CBAJ_T0056990.1 MGP_CBAJ_G0026125.1 mouse_genomes_project 2 137235282 137251617 + Slc12a1 protein_coding retained_intron MGP_CBAJ_T0056991.1 MGP_CBAJ_G0026125.1 mouse_genomes_project 2 137235302 137317071 + MGP_CBAJ_P0056991 Slc12a1 protein_coding protein_coding MGP_CBAJ_T0056992.1 MGP_CBAJ_G0026125.1 mouse_genomes_project 2 137235302 137317074 + MGP_CBAJ_P0056992 Slc12a1 protein_coding protein_coding MGP_CBAJ_T0056993.1 MGP_CBAJ_G0026125.1 mouse_genomes_project 2 137236631 137315934 + MGP_CBAJ_P0056993 Slc12a1 protein_coding unknown_likely_coding MGP_CBAJ_T0007043.1 MGP_CBAJ_G0005774.1 mouse_genomes_project 2 15854733 15858478 - Gm13322 lincRNA lincRNA MGP_CBAJ_T0013235.1 MGP_CBAJ_G0011347.1 mouse_genomes_project 2 2539608 2539833 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007276.1 MGP_CBAJ_G0005958.1 mouse_genomes_project 2 176070852 176112163 - Gm14223 lincRNA lincRNA MGP_CBAJ_T0007069.1 MGP_CBAJ_G0005792.1 mouse_genomes_project 2 30870601 30941423 + 9330198N18Rik lincRNA lincRNA MGP_CBAJ_T0004090.1 MGP_CBAJ_G0003610.1 mouse_genomes_project 2 182018599 182023155 + Gm14397 antisense antisense MGP_CBAJ_T0010358.1 MGP_CBAJ_G0008496.1 mouse_genomes_project 2 186183515 186183579 - Mir7004 miRNA miRNA MGP_CBAJ_T0007049.1 MGP_CBAJ_G0005778.1 mouse_genomes_project 2 20226435 20249935 + Gm13376 lincRNA lincRNA MGP_CBAJ_T0057572.1 MGP_CBAJ_G0026258.1 mouse_genomes_project 2 150116809 150187442 + MGP_CBAJ_P0057572 Snap25 protein_coding protein_coding MGP_CBAJ_T0057573.1 MGP_CBAJ_G0026258.1 mouse_genomes_project 2 150116810 150167937 + Snap25 protein_coding retained_intron MGP_CBAJ_T0057574.1 MGP_CBAJ_G0026258.1 mouse_genomes_project 2 150116834 150186365 + MGP_CBAJ_P0057574 Snap25 protein_coding protein_coding MGP_CBAJ_T0007042.1 MGP_CBAJ_G0005773.1 mouse_genomes_project 2 10880454 10891938 + Gm37565 lincRNA lincRNA MGP_CBAJ_T0055977.1 MGP_CBAJ_G0025887.1 mouse_genomes_project 2 110611861 110695120 - MGP_CBAJ_P0055977 B230118H07Rik protein_coding protein_coding MGP_CBAJ_T0055978.1 MGP_CBAJ_G0025887.1 mouse_genomes_project 2 110611870 110625608 - MGP_CBAJ_P0055978 B230118H07Rik protein_coding protein_coding MGP_CBAJ_T0055979.1 MGP_CBAJ_G0025887.1 mouse_genomes_project 2 110611971 110695072 - MGP_CBAJ_P0055979 B230118H07Rik protein_coding protein_coding MGP_CBAJ_T0055980.1 MGP_CBAJ_G0025887.1 mouse_genomes_project 2 110611975 110642618 - B230118H07Rik protein_coding processed_transcript MGP_CBAJ_T0055981.1 MGP_CBAJ_G0025887.1 mouse_genomes_project 2 110625517 110694432 - MGP_CBAJ_P0055981 B230118H07Rik protein_coding protein_coding MGP_CBAJ_T0055982.1 MGP_CBAJ_G0025887.1 mouse_genomes_project 2 110675414 110695139 - B230118H07Rik protein_coding retained_intron MGP_CBAJ_T0055983.1 MGP_CBAJ_G0025887.1 mouse_genomes_project 2 110675940 110687121 - B230118H07Rik protein_coding retained_intron MGP_CBAJ_T0055984.1 MGP_CBAJ_G0025887.1 mouse_genomes_project 2 110676450 110715648 - B230118H07Rik protein_coding retained_intron MGP_CBAJ_T0000985.1 MGP_CBAJ_G0000917.1 mouse_genomes_project 2 816255 817603 - TEC TEC MGP_CBAJ_T0055590.1 MGP_CBAJ_G0025829.1 mouse_genomes_project 2 98424556 98491220 + MGP_CBAJ_P0055590 Nup160 protein_coding protein_coding MGP_CBAJ_T0055591.1 MGP_CBAJ_G0025829.1 mouse_genomes_project 2 98432499 98442789 + Nup160 protein_coding processed_transcript MGP_CBAJ_T0055592.1 MGP_CBAJ_G0025829.1 mouse_genomes_project 2 98439378 98444508 + Nup160 protein_coding processed_transcript MGP_CBAJ_T0055593.1 MGP_CBAJ_G0025829.1 mouse_genomes_project 2 98440361 98455493 + Nup160 protein_coding processed_transcript MGP_CBAJ_T0055594.1 MGP_CBAJ_G0025829.1 mouse_genomes_project 2 98452778 98455105 + Nup160 protein_coding processed_transcript MGP_CBAJ_T0055595.1 MGP_CBAJ_G0025829.1 mouse_genomes_project 2 98472754 98473107 + Nup160 protein_coding processed_transcript MGP_CBAJ_T0055596.1 MGP_CBAJ_G0025829.1 mouse_genomes_project 2 98487615 98490676 + Nup160 protein_coding processed_transcript MGP_CBAJ_T0013538.1 MGP_CBAJ_G0011650.1 mouse_genomes_project 2 120457311 120458165 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057706.1 MGP_CBAJ_G0026293.1 mouse_genomes_project 2 159982971 160027929 + MGP_CBAJ_P0057706 Rin2 protein_coding protein_coding MGP_CBAJ_T0057707.1 MGP_CBAJ_G0026293.1 mouse_genomes_project 2 159984217 160099397 + MGP_CBAJ_P0057707 Rin2 protein_coding protein_coding MGP_CBAJ_T0057708.1 MGP_CBAJ_G0026293.1 mouse_genomes_project 2 159984353 160099397 + MGP_CBAJ_P0057708 Rin2 protein_coding protein_coding MGP_CBAJ_T0057709.1 MGP_CBAJ_G0026293.1 mouse_genomes_project 2 159984399 160028331 + MGP_CBAJ_P0057709 Rin2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057710.1 MGP_CBAJ_G0026293.1 mouse_genomes_project 2 160027776 160050422 + Rin2 protein_coding processed_transcript MGP_CBAJ_T0057711.1 MGP_CBAJ_G0026293.1 mouse_genomes_project 2 160027915 160050691 + Rin2 protein_coding processed_transcript MGP_CBAJ_T0057712.1 MGP_CBAJ_G0026293.1 mouse_genomes_project 2 160071803 160090761 + Rin2 protein_coding processed_transcript MGP_CBAJ_T0053418.1 MGP_CBAJ_G0025272.1 mouse_genomes_project 2 30396744 30444496 + MGP_CBAJ_P0053418 protein_coding nonsense_mediated_decay MGP_CBAJ_T0100375.1 MGP_CBAJ_G0038630.1 mouse_genomes_project 2 86887507 86887638 + Gm22652 snoRNA snoRNA MGP_CBAJ_T0010237.1 MGP_CBAJ_G0008375.1 mouse_genomes_project 2 8391932 8392030 + Mir669m-1 miRNA miRNA MGP_CBAJ_T0003850.1 MGP_CBAJ_G0003439.1 mouse_genomes_project 2 25772050 25774632 + Gm27196 antisense antisense MGP_CBAJ_T0010355.1 MGP_CBAJ_G0008493.1 mouse_genomes_project 2 185020562 185020648 - Gm22355 miRNA miRNA MGP_CBAJ_T0058153.1 MGP_CBAJ_G0026423.1 mouse_genomes_project 2 170538648 170553932 - MGP_CBAJ_P0058153 protein_coding protein_coding MGP_CBAJ_T0058154.1 MGP_CBAJ_G0026423.1 mouse_genomes_project 2 170545230 170553882 - MGP_CBAJ_P0058154 protein_coding protein_coding MGP_CBAJ_T0058155.1 MGP_CBAJ_G0026423.1 mouse_genomes_project 2 170548024 170553882 - protein_coding retained_intron MGP_CBAJ_T0056978.1 MGP_CBAJ_G0026122.1 mouse_genomes_project 2 137155925 137160215 - Myef2 protein_coding processed_transcript MGP_CBAJ_T0056979.1 MGP_CBAJ_G0026122.1 mouse_genomes_project 2 137157483 137200020 - MGP_CBAJ_P0056979 Myef2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056980.1 MGP_CBAJ_G0026122.1 mouse_genomes_project 2 137157780 137200051 - MGP_CBAJ_P0056980 Myef2 protein_coding protein_coding MGP_CBAJ_T0056981.1 MGP_CBAJ_G0026122.1 mouse_genomes_project 2 137158953 137200048 - MGP_CBAJ_P0056981 Myef2 protein_coding protein_coding MGP_CBAJ_T0056982.1 MGP_CBAJ_G0026122.1 mouse_genomes_project 2 137158954 137200086 - MGP_CBAJ_P0056982 Myef2 protein_coding protein_coding MGP_CBAJ_T0056983.1 MGP_CBAJ_G0026122.1 mouse_genomes_project 2 137158954 137200085 - MGP_CBAJ_P0056983 Myef2 protein_coding protein_coding MGP_CBAJ_T0056984.1 MGP_CBAJ_G0026122.1 mouse_genomes_project 2 137160037 137193284 - MGP_CBAJ_P0056984 Myef2 protein_coding protein_coding MGP_CBAJ_T0056985.1 MGP_CBAJ_G0026122.1 mouse_genomes_project 2 137166668 137199839 - MGP_CBAJ_P0056985 Myef2 protein_coding protein_coding MGP_CBAJ_T0056986.1 MGP_CBAJ_G0026122.1 mouse_genomes_project 2 137170522 137200000 - Myef2 protein_coding retained_intron MGP_CBAJ_T0010365.1 MGP_CBAJ_G0008503.1 mouse_genomes_project 2 199060870 199060939 - Mir7005 miRNA miRNA MGP_CBAJ_T0055028.1 MGP_CBAJ_G0025557.1 mouse_genomes_project 2 80019588 80026151 - MGP_CBAJ_P0055028 Evx2 protein_coding protein_coding MGP_CBAJ_T0055029.1 MGP_CBAJ_G0025557.1 mouse_genomes_project 2 80022217 80026013 - MGP_CBAJ_P0055029 Evx2 protein_coding protein_coding MGP_CBAJ_T0004000.1 MGP_CBAJ_G0003545.1 mouse_genomes_project 2 138941097 138951772 + Gm27003 antisense antisense MGP_CBAJ_T0053005.1 MGP_CBAJ_G0025202.1 mouse_genomes_project 2 26051887 26100459 - MGP_CBAJ_P0053005 Notch1 protein_coding protein_coding MGP_CBAJ_T0053006.1 MGP_CBAJ_G0025202.1 mouse_genomes_project 2 26056202 26056732 - Notch1 protein_coding processed_transcript MGP_CBAJ_T0053007.1 MGP_CBAJ_G0025202.1 mouse_genomes_project 2 26059455 26061598 - Notch1 protein_coding processed_transcript MGP_CBAJ_T0053008.1 MGP_CBAJ_G0025202.1 mouse_genomes_project 2 26059455 26060779 - Notch1 protein_coding processed_transcript MGP_CBAJ_T0053009.1 MGP_CBAJ_G0025202.1 mouse_genomes_project 2 26059455 26060639 - Notch1 protein_coding processed_transcript MGP_CBAJ_T0053010.1 MGP_CBAJ_G0025202.1 mouse_genomes_project 2 26059455 26060352 - Notch1 protein_coding processed_transcript MGP_CBAJ_T0053011.1 MGP_CBAJ_G0025202.1 mouse_genomes_project 2 26059455 26060148 - Notch1 protein_coding processed_transcript MGP_CBAJ_T0053012.1 MGP_CBAJ_G0025202.1 mouse_genomes_project 2 26062527 26063734 - Notch1 protein_coding processed_transcript MGP_CBAJ_T0053013.1 MGP_CBAJ_G0025202.1 mouse_genomes_project 2 26063809 26064483 - Notch1 protein_coding processed_transcript MGP_CBAJ_T0053014.1 MGP_CBAJ_G0025202.1 mouse_genomes_project 2 26065260 26117331 - MGP_CBAJ_P0053014 Notch1 protein_coding protein_coding MGP_CBAJ_T0053015.1 MGP_CBAJ_G0025202.1 mouse_genomes_project 2 26094794 26100461 - Notch1 protein_coding retained_intron MGP_CBAJ_T0099135.1 MGP_CBAJ_G0037390.1 mouse_genomes_project 2 153207891 153207995 + Gm27385 snRNA snRNA MGP_CBAJ_T0003940.1 MGP_CBAJ_G0003505.1 mouse_genomes_project 2 78858192 78880252 + Chn1os3 antisense antisense MGP_CBAJ_T0003941.1 MGP_CBAJ_G0003505.1 mouse_genomes_project 2 78858490 78860867 + Chn1os3 antisense antisense MGP_CBAJ_T0010254.1 MGP_CBAJ_G0008392.1 mouse_genomes_project 2 21772151 21772246 + Gm23636 miRNA miRNA MGP_CBAJ_T0007336.1 MGP_CBAJ_G0006011.1 mouse_genomes_project 2 199794099 199808101 + Gm14344 lincRNA lincRNA MGP_CBAJ_T0003955.1 MGP_CBAJ_G0003515.1 mouse_genomes_project 2 91670909 91683808 + Gm13713 antisense antisense MGP_CBAJ_T0003956.1 MGP_CBAJ_G0003515.1 mouse_genomes_project 2 91670909 91709663 + Gm13713 antisense antisense MGP_CBAJ_T0055417.1 MGP_CBAJ_G0025692.1 mouse_genomes_project 2 93691028 93692021 + MGP_CBAJ_P0055417 Olfr1094 protein_coding protein_coding MGP_CBAJ_T0101810.1 MGP_CBAJ_G0039841.1 mouse_genomes_project 2 94921420 94922357 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099139.1 MGP_CBAJ_G0037394.1 mouse_genomes_project 2 168321041 168321144 + Gm25643 snRNA snRNA MGP_CBAJ_T0055545.1 MGP_CBAJ_G0025800.1 mouse_genomes_project 2 97084220 97085331 - MGP_CBAJ_P0055545 Olfr1243 protein_coding protein_coding MGP_CBAJ_T0055546.1 MGP_CBAJ_G0025800.1 mouse_genomes_project 2 97084979 97087983 - Olfr1243 protein_coding processed_transcript MGP_CBAJ_T0007039.1 MGP_CBAJ_G0005770.1 mouse_genomes_project 2 9331922 9402210 - 8030442B05Rik lincRNA lincRNA MGP_CBAJ_T0057888.1 MGP_CBAJ_G0026341.1 mouse_genomes_project 2 166645049 166672689 - MGP_CBAJ_P0057888 Psmf1 protein_coding protein_coding MGP_CBAJ_T0057889.1 MGP_CBAJ_G0026341.1 mouse_genomes_project 2 166645299 166650233 - Psmf1 protein_coding retained_intron MGP_CBAJ_T0057890.1 MGP_CBAJ_G0026341.1 mouse_genomes_project 2 166645299 166672672 - MGP_CBAJ_P0057890 Psmf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057891.1 MGP_CBAJ_G0026341.1 mouse_genomes_project 2 166647502 166675565 - MGP_CBAJ_P0057891 Psmf1 protein_coding protein_coding MGP_CBAJ_T0057892.1 MGP_CBAJ_G0026341.1 mouse_genomes_project 2 166648722 166659167 - Psmf1 protein_coding retained_intron MGP_CBAJ_T0057893.1 MGP_CBAJ_G0026341.1 mouse_genomes_project 2 166656683 166672672 - Psmf1 protein_coding retained_intron MGP_CBAJ_T0053314.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29982920 29994806 + MGP_CBAJ_P0053314 Odf2 protein_coding protein_coding MGP_CBAJ_T0053315.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29982933 29986277 + Odf2 protein_coding retained_intron MGP_CBAJ_T0053316.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29983419 30015922 + MGP_CBAJ_P0053316 Odf2 protein_coding protein_coding MGP_CBAJ_T0053317.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29983484 30015922 + MGP_CBAJ_P0053317 Odf2 protein_coding protein_coding MGP_CBAJ_T0053318.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29983494 30024478 + MGP_CBAJ_P0053318 Odf2 protein_coding protein_coding MGP_CBAJ_T0053319.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29983494 30025128 + MGP_CBAJ_P0053319 Odf2 protein_coding protein_coding MGP_CBAJ_T0053320.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29983497 30024478 + MGP_CBAJ_P0053320 Odf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053321.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29983510 29995975 + Odf2 protein_coding processed_transcript MGP_CBAJ_T0053322.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29983514 29995945 + MGP_CBAJ_P0053322 Odf2 protein_coding protein_coding MGP_CBAJ_T0053323.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29983516 30025128 + MGP_CBAJ_P0053323 Odf2 protein_coding protein_coding MGP_CBAJ_T0053324.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29983517 30015922 + MGP_CBAJ_P0053324 Odf2 protein_coding protein_coding MGP_CBAJ_T0053325.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29983524 29995192 + Odf2 protein_coding retained_intron MGP_CBAJ_T0053326.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29983533 29997772 + MGP_CBAJ_P0053326 Odf2 protein_coding protein_coding MGP_CBAJ_T0053327.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29983594 30025129 + MGP_CBAJ_P0053327 Odf2 protein_coding protein_coding MGP_CBAJ_T0053328.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29983762 30015922 + MGP_CBAJ_P0053328 Odf2 protein_coding protein_coding MGP_CBAJ_T0053329.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29983782 29984690 + Odf2 protein_coding processed_transcript MGP_CBAJ_T0053330.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29983842 30015922 + MGP_CBAJ_P0053330 Odf2 protein_coding protein_coding MGP_CBAJ_T0053331.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29983855 30024478 + MGP_CBAJ_P0053331 Odf2 protein_coding protein_coding MGP_CBAJ_T0053332.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29984239 30015919 + MGP_CBAJ_P0053332 Odf2 protein_coding protein_coding MGP_CBAJ_T0053333.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29985695 29994820 + Odf2 protein_coding processed_transcript MGP_CBAJ_T0053334.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29997236 30008257 + Odf2 protein_coding processed_transcript MGP_CBAJ_T0053335.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 29997267 30008698 + Odf2 protein_coding processed_transcript MGP_CBAJ_T0053336.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 30006007 30008661 + Odf2 protein_coding retained_intron MGP_CBAJ_T0053337.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 30007777 30012579 + Odf2 protein_coding retained_intron MGP_CBAJ_T0053338.1 MGP_CBAJ_G0025259.1 mouse_genomes_project 2 30018854 30020128 + Odf2 protein_coding retained_intron MGP_CBAJ_T0058544.1 MGP_CBAJ_G0026487.1 mouse_genomes_project 2 174351855 174362364 + MGP_CBAJ_P0058544 Snhg11 protein_coding protein_coding MGP_CBAJ_T0058545.1 MGP_CBAJ_G0026487.1 mouse_genomes_project 2 174351878 174353424 + Snhg11 protein_coding retained_intron MGP_CBAJ_T0058546.1 MGP_CBAJ_G0026487.1 mouse_genomes_project 2 174351915 174357807 + MGP_CBAJ_P0058546 Snhg11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058547.1 MGP_CBAJ_G0026487.1 mouse_genomes_project 2 174351932 174355280 + Snhg11 protein_coding retained_intron MGP_CBAJ_T0058548.1 MGP_CBAJ_G0026487.1 mouse_genomes_project 2 174351942 174357280 + MGP_CBAJ_P0058548 Snhg11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0017638.1 MGP_CBAJ_G0015226.1 mouse_genomes_project 2 172572084 172591249 - 5430405H02Rik processed_transcript antisense MGP_CBAJ_T0017639.1 MGP_CBAJ_G0015226.1 mouse_genomes_project 2 172580163 172591231 - 5430405H02Rik processed_transcript antisense MGP_CBAJ_T0017640.1 MGP_CBAJ_G0015226.1 mouse_genomes_project 2 172580163 172591180 - 5430405H02Rik processed_transcript antisense MGP_CBAJ_T0052744.1 MGP_CBAJ_G0025153.1 mouse_genomes_project 2 24811497 24817291 - MGP_CBAJ_P0052744 Uap1l1 protein_coding protein_coding MGP_CBAJ_T0052745.1 MGP_CBAJ_G0025153.1 mouse_genomes_project 2 24813097 24814339 - Uap1l1 protein_coding processed_transcript MGP_CBAJ_T0052746.1 MGP_CBAJ_G0025153.1 mouse_genomes_project 2 24813098 24815307 - Uap1l1 protein_coding processed_transcript MGP_CBAJ_T0052747.1 MGP_CBAJ_G0025153.1 mouse_genomes_project 2 24813102 24815737 - Uap1l1 protein_coding processed_transcript MGP_CBAJ_T0052748.1 MGP_CBAJ_G0025153.1 mouse_genomes_project 2 24814951 24816266 - Uap1l1 protein_coding processed_transcript MGP_CBAJ_T0052749.1 MGP_CBAJ_G0025153.1 mouse_genomes_project 2 24815726 24817224 - Uap1l1 protein_coding processed_transcript MGP_CBAJ_T0013395.1 MGP_CBAJ_G0011507.1 mouse_genomes_project 2 69091698 69093753 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007021.1 MGP_CBAJ_G0005756.1 mouse_genomes_project 2 982532 985864 - Gm13191 lincRNA lincRNA MGP_CBAJ_T0099119.1 MGP_CBAJ_G0037374.1 mouse_genomes_project 2 120237820 120237927 + Gm22997 snRNA snRNA MGP_CBAJ_T0053236.1 MGP_CBAJ_G0025246.1 mouse_genomes_project 2 28837818 28846849 - MGP_CBAJ_P0053236 Barhl1 protein_coding protein_coding MGP_CBAJ_T0053237.1 MGP_CBAJ_G0025246.1 mouse_genomes_project 2 28837823 28842635 - Barhl1 protein_coding processed_transcript MGP_CBAJ_T0053238.1 MGP_CBAJ_G0025246.1 mouse_genomes_project 2 28839108 28846868 - MGP_CBAJ_P0053238 Barhl1 protein_coding protein_coding MGP_CBAJ_T0053239.1 MGP_CBAJ_G0025246.1 mouse_genomes_project 2 28839108 28847103 - MGP_CBAJ_P0053239 Barhl1 protein_coding protein_coding MGP_CBAJ_T0053240.1 MGP_CBAJ_G0025246.1 mouse_genomes_project 2 28839779 28845942 - Barhl1 protein_coding processed_transcript MGP_CBAJ_T0017625.1 MGP_CBAJ_G0015218.1 mouse_genomes_project 2 152849991 153307527 - processed_transcript processed_transcript MGP_CBAJ_T0056415.1 MGP_CBAJ_G0026011.1 mouse_genomes_project 2 129591153 129594270 - MGP_CBAJ_P0056415 Srp14 protein_coding protein_coding MGP_CBAJ_T0056416.1 MGP_CBAJ_G0026011.1 mouse_genomes_project 2 129591154 129593405 - Srp14 protein_coding processed_transcript MGP_CBAJ_T0056417.1 MGP_CBAJ_G0026011.1 mouse_genomes_project 2 129591164 129594207 - Srp14 protein_coding processed_transcript MGP_CBAJ_T0056418.1 MGP_CBAJ_G0026011.1 mouse_genomes_project 2 129593086 129594194 - MGP_CBAJ_P0056418 Srp14 protein_coding protein_coding MGP_CBAJ_T0055991.1 MGP_CBAJ_G0025891.1 mouse_genomes_project 2 110790918 110927073 - MGP_CBAJ_P0055991 Prr5l protein_coding protein_coding MGP_CBAJ_T0055992.1 MGP_CBAJ_G0025891.1 mouse_genomes_project 2 110790918 110884880 - MGP_CBAJ_P0055992 Prr5l protein_coding protein_coding MGP_CBAJ_T0055993.1 MGP_CBAJ_G0025891.1 mouse_genomes_project 2 110792873 110884881 - MGP_CBAJ_P0055993 Prr5l protein_coding protein_coding MGP_CBAJ_T0055994.1 MGP_CBAJ_G0025891.1 mouse_genomes_project 2 110793881 110884823 - MGP_CBAJ_P0055994 Prr5l protein_coding protein_coding MGP_CBAJ_T0055995.1 MGP_CBAJ_G0025891.1 mouse_genomes_project 2 110822765 110927073 - MGP_CBAJ_P0055995 Prr5l protein_coding protein_coding MGP_CBAJ_T0055996.1 MGP_CBAJ_G0025891.1 mouse_genomes_project 2 110844401 110976326 - MGP_CBAJ_P0055996 Prr5l protein_coding protein_coding MGP_CBAJ_T0055997.1 MGP_CBAJ_G0025891.1 mouse_genomes_project 2 110858022 110885227 - MGP_CBAJ_P0055997 Prr5l protein_coding protein_coding MGP_CBAJ_T0055998.1 MGP_CBAJ_G0025891.1 mouse_genomes_project 2 110858066 110902356 - MGP_CBAJ_P0055998 Prr5l protein_coding protein_coding MGP_CBAJ_T0055999.1 MGP_CBAJ_G0025891.1 mouse_genomes_project 2 110858177 110884906 - Prr5l protein_coding processed_transcript MGP_CBAJ_T0056000.1 MGP_CBAJ_G0025891.1 mouse_genomes_project 2 110920107 110976339 - Prr5l protein_coding processed_transcript MGP_CBAJ_T0004024.1 MGP_CBAJ_G0003559.1 mouse_genomes_project 2 145732361 145739047 - Gm14097 antisense antisense MGP_CBAJ_T0007121.1 MGP_CBAJ_G0005836.1 mouse_genomes_project 2 77010561 77011877 + Gm13746 lincRNA lincRNA MGP_CBAJ_T0013447.1 MGP_CBAJ_G0011559.1 mouse_genomes_project 2 86909040 86910168 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0054959.1 MGP_CBAJ_G0025546.1 mouse_genomes_project 2 78298908 78434785 - MGP_CBAJ_P0054959 Ola1 protein_coding protein_coding MGP_CBAJ_T0054960.1 MGP_CBAJ_G0025546.1 mouse_genomes_project 2 78299307 78434764 - Ola1 protein_coding processed_transcript MGP_CBAJ_T0054961.1 MGP_CBAJ_G0025546.1 mouse_genomes_project 2 78299309 78433298 - MGP_CBAJ_P0054961 Ola1 protein_coding protein_coding MGP_CBAJ_T0054962.1 MGP_CBAJ_G0025546.1 mouse_genomes_project 2 78351976 78434671 - MGP_CBAJ_P0054962 Ola1 protein_coding protein_coding MGP_CBAJ_T0054963.1 MGP_CBAJ_G0025546.1 mouse_genomes_project 2 78418203 78434750 - Ola1 protein_coding processed_transcript MGP_CBAJ_T0054964.1 MGP_CBAJ_G0025546.1 mouse_genomes_project 2 78433208 78439262 - Ola1 protein_coding processed_transcript MGP_CBAJ_T0013513.1 MGP_CBAJ_G0011625.1 mouse_genomes_project 2 112457283 112457710 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055442.1 MGP_CBAJ_G0025717.1 mouse_genomes_project 2 94518746 94522084 - MGP_CBAJ_P0055442 Pramel7 protein_coding protein_coding MGP_CBAJ_T0055443.1 MGP_CBAJ_G0025717.1 mouse_genomes_project 2 94520549 94526340 - Pramel7 protein_coding processed_transcript MGP_CBAJ_T0055444.1 MGP_CBAJ_G0025717.1 mouse_genomes_project 2 94520643 94526521 - Pramel7 protein_coding processed_transcript MGP_CBAJ_T0055445.1 MGP_CBAJ_G0025717.1 mouse_genomes_project 2 94520785 94526349 - Pramel7 protein_coding processed_transcript MGP_CBAJ_T0052651.1 MGP_CBAJ_G0025134.1 mouse_genomes_project 2 24626005 24629926 - MGP_CBAJ_P0052651 Tor4a protein_coding protein_coding MGP_CBAJ_T0052652.1 MGP_CBAJ_G0025134.1 mouse_genomes_project 2 24628096 24629799 - MGP_CBAJ_P0052652 Tor4a protein_coding protein_coding MGP_CBAJ_T0052653.1 MGP_CBAJ_G0025134.1 mouse_genomes_project 2 24628831 24629811 - MGP_CBAJ_P0052653 Tor4a protein_coding protein_coding MGP_CBAJ_T0010335.1 MGP_CBAJ_G0008473.1 mouse_genomes_project 2 143836868 143836948 - Mir6973b miRNA miRNA MGP_CBAJ_T0052181.1 MGP_CBAJ_G0025056.1 mouse_genomes_project 2 9621126 9640536 - MGP_CBAJ_P0052181 Rbm17 protein_coding protein_coding MGP_CBAJ_T0052182.1 MGP_CBAJ_G0025056.1 mouse_genomes_project 2 9621128 9621680 - Rbm17 protein_coding retained_intron MGP_CBAJ_T0052183.1 MGP_CBAJ_G0025056.1 mouse_genomes_project 2 9621130 9622858 - Rbm17 protein_coding retained_intron MGP_CBAJ_T0052184.1 MGP_CBAJ_G0025056.1 mouse_genomes_project 2 9623080 9625937 - Rbm17 protein_coding retained_intron MGP_CBAJ_T0052185.1 MGP_CBAJ_G0025056.1 mouse_genomes_project 2 9625870 9627814 - Rbm17 protein_coding retained_intron MGP_CBAJ_T0052186.1 MGP_CBAJ_G0025056.1 mouse_genomes_project 2 9633961 9641422 - MGP_CBAJ_P0052186 Rbm17 protein_coding protein_coding MGP_CBAJ_T0017482.1 MGP_CBAJ_G0015139.1 mouse_genomes_project 2 17644271 17665215 - Gm20539 processed_transcript processed_transcript MGP_CBAJ_T0056595.1 MGP_CBAJ_G0026052.1 mouse_genomes_project 2 131326983 131331948 + MGP_CBAJ_P0056595 Jmjd7 protein_coding protein_coding MGP_CBAJ_T0056597.1 MGP_CBAJ_G0026052.1 mouse_genomes_project 2 131327004 131329892 + MGP_CBAJ_P0056597 Jmjd7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056600.1 MGP_CBAJ_G0026052.1 mouse_genomes_project 2 131327016 131331230 + Jmjd7 protein_coding processed_transcript MGP_CBAJ_T0056601.1 MGP_CBAJ_G0026052.1 mouse_genomes_project 2 131327057 131330747 + Jmjd7 protein_coding processed_transcript MGP_CBAJ_T0056602.1 MGP_CBAJ_G0026052.1 mouse_genomes_project 2 131327094 131329739 + MGP_CBAJ_P0056602 Jmjd7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0055497.1 MGP_CBAJ_G0025761.1 mouse_genomes_project 2 95870602 95870989 - MGP_CBAJ_P0055497 Olfr1187-ps1 protein_coding protein_coding MGP_CBAJ_T0055498.1 MGP_CBAJ_G0025761.1 mouse_genomes_project 2 95870605 95870908 - MGP_CBAJ_P0055498 Olfr1187-ps1 protein_coding protein_coding MGP_CBAJ_T0054235.1 MGP_CBAJ_G0025421.1 mouse_genomes_project 2 40304100 40315683 + Arpc5l protein_coding processed_transcript MGP_CBAJ_T0054236.1 MGP_CBAJ_G0025421.1 mouse_genomes_project 2 40306816 40316234 + MGP_CBAJ_P0054236 Arpc5l protein_coding protein_coding MGP_CBAJ_T0054237.1 MGP_CBAJ_G0025421.1 mouse_genomes_project 2 40306881 40314256 + Arpc5l protein_coding processed_transcript MGP_CBAJ_T0054238.1 MGP_CBAJ_G0025421.1 mouse_genomes_project 2 40306897 40315750 + MGP_CBAJ_P0054238 Arpc5l protein_coding nonsense_mediated_decay MGP_CBAJ_T0054239.1 MGP_CBAJ_G0025421.1 mouse_genomes_project 2 40308758 40316234 + Arpc5l protein_coding processed_transcript MGP_CBAJ_T0057947.1 MGP_CBAJ_G0026369.1 mouse_genomes_project 2 167705745 167713994 + MGP_CBAJ_P0057947 Rem1 protein_coding protein_coding MGP_CBAJ_T0057948.1 MGP_CBAJ_G0026369.1 mouse_genomes_project 2 167705747 167707096 + MGP_CBAJ_P0057948 Rem1 protein_coding protein_coding MGP_CBAJ_T0057949.1 MGP_CBAJ_G0026369.1 mouse_genomes_project 2 167711755 167713998 + Rem1 protein_coding retained_intron MGP_CBAJ_T0053520.1 MGP_CBAJ_G0025285.1 mouse_genomes_project 2 31082474 31104164 + MGP_CBAJ_P0053520 Ntmt1 protein_coding protein_coding MGP_CBAJ_T0053521.1 MGP_CBAJ_G0025285.1 mouse_genomes_project 2 31082589 31104148 + MGP_CBAJ_P0053521 Ntmt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053522.1 MGP_CBAJ_G0025285.1 mouse_genomes_project 2 31082590 31103516 + MGP_CBAJ_P0053522 Ntmt1 protein_coding protein_coding MGP_CBAJ_T0053523.1 MGP_CBAJ_G0025285.1 mouse_genomes_project 2 31082605 31093849 + Ntmt1 protein_coding processed_transcript MGP_CBAJ_T0053524.1 MGP_CBAJ_G0025285.1 mouse_genomes_project 2 31082642 31094313 + Ntmt1 protein_coding processed_transcript MGP_CBAJ_T0053525.1 MGP_CBAJ_G0025285.1 mouse_genomes_project 2 31082761 31103683 + MGP_CBAJ_P0053525 Ntmt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053526.1 MGP_CBAJ_G0025285.1 mouse_genomes_project 2 31082838 31098173 + MGP_CBAJ_P0053526 Ntmt1 protein_coding protein_coding MGP_CBAJ_T0053527.1 MGP_CBAJ_G0025285.1 mouse_genomes_project 2 31095620 31098293 + MGP_CBAJ_P0053527 Ntmt1 protein_coding protein_coding MGP_CBAJ_T0053528.1 MGP_CBAJ_G0025285.1 mouse_genomes_project 2 31097326 31103690 + MGP_CBAJ_P0053528 Ntmt1 protein_coding protein_coding MGP_CBAJ_T0052819.1 MGP_CBAJ_G0025164.1 mouse_genomes_project 2 24969379 24978041 + MGP_CBAJ_P0052819 Fbxw5 protein_coding protein_coding MGP_CBAJ_T0052820.1 MGP_CBAJ_G0025164.1 mouse_genomes_project 2 24973385 24976120 + Fbxw5 protein_coding processed_transcript MGP_CBAJ_T0052821.1 MGP_CBAJ_G0025164.1 mouse_genomes_project 2 24973387 24976383 + Fbxw5 protein_coding processed_transcript MGP_CBAJ_T0052822.1 MGP_CBAJ_G0025164.1 mouse_genomes_project 2 24973428 24975756 + Fbxw5 protein_coding processed_transcript MGP_CBAJ_T0052823.1 MGP_CBAJ_G0025164.1 mouse_genomes_project 2 24973448 24976174 + Fbxw5 protein_coding processed_transcript MGP_CBAJ_T0052824.1 MGP_CBAJ_G0025164.1 mouse_genomes_project 2 24975127 24976154 + Fbxw5 protein_coding processed_transcript MGP_CBAJ_T0052825.1 MGP_CBAJ_G0025164.1 mouse_genomes_project 2 24975607 24976370 + Fbxw5 protein_coding processed_transcript MGP_CBAJ_T0052826.1 MGP_CBAJ_G0025164.1 mouse_genomes_project 2 24975795 24977404 + MGP_CBAJ_P0052826 Fbxw5 protein_coding protein_coding MGP_CBAJ_T0052827.1 MGP_CBAJ_G0025164.1 mouse_genomes_project 2 24976476 24977515 + Fbxw5 protein_coding processed_transcript MGP_CBAJ_T0056947.1 MGP_CBAJ_G0026117.1 mouse_genomes_project 2 134440479 134471836 - MGP_CBAJ_P0056947 Slc30a4 protein_coding protein_coding MGP_CBAJ_T0056948.1 MGP_CBAJ_G0026117.1 mouse_genomes_project 2 134446211 134471860 - MGP_CBAJ_P0056948 Slc30a4 protein_coding protein_coding MGP_CBAJ_T0013694.1 MGP_CBAJ_G0011806.1 mouse_genomes_project 2 193093344 193093917 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003876.1 MGP_CBAJ_G0003459.1 mouse_genomes_project 2 33514460 33516443 + Gm13524 antisense antisense MGP_CBAJ_T0013303.1 MGP_CBAJ_G0011415.1 mouse_genomes_project 2 32858545 32858863 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013587.1 MGP_CBAJ_G0011699.1 mouse_genomes_project 2 145706758 145707363 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0059151.1 MGP_CBAJ_G0026633.1 mouse_genomes_project 2 188693799 188860257 + MGP_CBAJ_P0059151 Dok5 protein_coding protein_coding MGP_CBAJ_T0052027.1 MGP_CBAJ_G0025031.1 mouse_genomes_project 2 2190749 2214722 - MGP_CBAJ_P0052027 Mcm10 protein_coding protein_coding MGP_CBAJ_T0052028.1 MGP_CBAJ_G0025031.1 mouse_genomes_project 2 2191759 2196772 - Mcm10 protein_coding retained_intron MGP_CBAJ_T0052029.1 MGP_CBAJ_G0025031.1 mouse_genomes_project 2 2191759 2202509 - Mcm10 protein_coding retained_intron MGP_CBAJ_T0052030.1 MGP_CBAJ_G0025031.1 mouse_genomes_project 2 2191759 2215174 - MGP_CBAJ_P0052030 Mcm10 protein_coding protein_coding MGP_CBAJ_T0052031.1 MGP_CBAJ_G0025031.1 mouse_genomes_project 2 2192066 2194135 - Mcm10 protein_coding retained_intron MGP_CBAJ_T0052032.1 MGP_CBAJ_G0025031.1 mouse_genomes_project 2 2192295 2195716 - Mcm10 protein_coding retained_intron MGP_CBAJ_T0052033.1 MGP_CBAJ_G0025031.1 mouse_genomes_project 2 2199971 2206150 - Mcm10 protein_coding retained_intron MGP_CBAJ_T0052034.1 MGP_CBAJ_G0025031.1 mouse_genomes_project 2 2205092 2206370 - Mcm10 protein_coding retained_intron MGP_CBAJ_T0052035.1 MGP_CBAJ_G0025031.1 mouse_genomes_project 2 2207561 2215136 - Mcm10 protein_coding processed_transcript MGP_CBAJ_T0052036.1 MGP_CBAJ_G0025031.1 mouse_genomes_project 2 2208048 2215098 - Mcm10 protein_coding retained_intron MGP_CBAJ_T0013415.1 MGP_CBAJ_G0011527.1 mouse_genomes_project 2 76793990 76794520 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000995.1 MGP_CBAJ_G0000927.1 mouse_genomes_project 2 9356525 9358736 - TEC TEC MGP_CBAJ_T0007310.1 MGP_CBAJ_G0005988.1 mouse_genomes_project 2 186708901 186710262 + Gm9873 lincRNA lincRNA MGP_CBAJ_T0007311.1 MGP_CBAJ_G0005988.1 mouse_genomes_project 2 186709146 186710243 + Gm9873 lincRNA lincRNA MGP_CBAJ_T0058014.1 MGP_CBAJ_G0026385.1 mouse_genomes_project 2 168397302 168402150 - MGP_CBAJ_P0058014 Tspyl3 protein_coding protein_coding MGP_CBAJ_T0054277.1 MGP_CBAJ_G0025427.1 mouse_genomes_project 2 45525638 45538468 + Kynu protein_coding processed_transcript MGP_CBAJ_T0054278.1 MGP_CBAJ_G0025427.1 mouse_genomes_project 2 45525638 45678506 + MGP_CBAJ_P0054278 Kynu protein_coding protein_coding MGP_CBAJ_T0054279.1 MGP_CBAJ_G0025427.1 mouse_genomes_project 2 45525651 45673980 + MGP_CBAJ_P0054279 Kynu protein_coding protein_coding MGP_CBAJ_T0054280.1 MGP_CBAJ_G0025427.1 mouse_genomes_project 2 45525663 45615251 + MGP_CBAJ_P0054280 Kynu protein_coding protein_coding MGP_CBAJ_T0054281.1 MGP_CBAJ_G0025427.1 mouse_genomes_project 2 45576581 45583173 + Kynu protein_coding processed_transcript MGP_CBAJ_T0054282.1 MGP_CBAJ_G0025427.1 mouse_genomes_project 2 45659357 45676198 + Kynu protein_coding processed_transcript MGP_CBAJ_T0056546.1 MGP_CBAJ_G0026045.1 mouse_genomes_project 2 130927098 130994997 + MGP_CBAJ_P0056546 Rtf1 protein_coding protein_coding MGP_CBAJ_T0056547.1 MGP_CBAJ_G0026045.1 mouse_genomes_project 2 130927127 130946668 + Rtf1 protein_coding processed_transcript MGP_CBAJ_T0056548.1 MGP_CBAJ_G0026045.1 mouse_genomes_project 2 130967106 130968487 + Rtf1 protein_coding retained_intron MGP_CBAJ_T0056549.1 MGP_CBAJ_G0026045.1 mouse_genomes_project 2 130985426 130986389 + Rtf1 protein_coding retained_intron MGP_CBAJ_T0052306.1 MGP_CBAJ_G0025075.1 mouse_genomes_project 2 12771247 12906778 + MGP_CBAJ_P0052306 Slc39a12 protein_coding protein_coding MGP_CBAJ_T0052307.1 MGP_CBAJ_G0025075.1 mouse_genomes_project 2 12771437 12772465 + MGP_CBAJ_P0052307 Slc39a12 protein_coding protein_coding MGP_CBAJ_T0055081.1 MGP_CBAJ_G0025579.1 mouse_genomes_project 2 82241994 82263596 - MGP_CBAJ_P0055081 Prkra protein_coding protein_coding MGP_CBAJ_T0055082.1 MGP_CBAJ_G0025579.1 mouse_genomes_project 2 82250039 82253980 - Prkra protein_coding processed_transcript MGP_CBAJ_T0052877.1 MGP_CBAJ_G0025177.1 mouse_genomes_project 2 25181899 25185255 + MGP_CBAJ_P0052877 Lcn10 protein_coding protein_coding MGP_CBAJ_T0056994.1 MGP_CBAJ_G0026126.1 mouse_genomes_project 2 137331980 137344465 + MGP_CBAJ_P0056994 Dut protein_coding protein_coding MGP_CBAJ_T0056995.1 MGP_CBAJ_G0026126.1 mouse_genomes_project 2 137332272 137345335 + MGP_CBAJ_P0056995 Dut protein_coding protein_coding MGP_CBAJ_T0056996.1 MGP_CBAJ_G0026126.1 mouse_genomes_project 2 137332690 137333817 + Dut protein_coding processed_transcript MGP_CBAJ_T0013292.1 MGP_CBAJ_G0011404.1 mouse_genomes_project 2 25534661 25535299 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0056520.1 MGP_CBAJ_G0026035.1 mouse_genomes_project 2 130463749 130465821 - MGP_CBAJ_P0056520 Rhov protein_coding protein_coding MGP_CBAJ_T0013506.1 MGP_CBAJ_G0011618.1 mouse_genomes_project 2 109363699 109364486 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0053870.1 MGP_CBAJ_G0025338.1 mouse_genomes_project 2 33558253 33611883 + MGP_CBAJ_P0053870 Fam129b protein_coding protein_coding MGP_CBAJ_T0053871.1 MGP_CBAJ_G0025338.1 mouse_genomes_project 2 33582408 33596560 + MGP_CBAJ_P0053871 Fam129b protein_coding protein_coding MGP_CBAJ_T0053872.1 MGP_CBAJ_G0025338.1 mouse_genomes_project 2 33597509 33599189 + Fam129b protein_coding retained_intron MGP_CBAJ_T0053873.1 MGP_CBAJ_G0025338.1 mouse_genomes_project 2 33601339 33607653 + Fam129b protein_coding processed_transcript MGP_CBAJ_T0053874.1 MGP_CBAJ_G0025338.1 mouse_genomes_project 2 33605269 33608736 + Fam129b protein_coding processed_transcript MGP_CBAJ_T0053875.1 MGP_CBAJ_G0025338.1 mouse_genomes_project 2 33608270 33610268 + Fam129b protein_coding processed_transcript MGP_CBAJ_T0058517.1 MGP_CBAJ_G0026481.1 mouse_genomes_project 2 173907086 173956675 - MGP_CBAJ_P0058517 Tti1 protein_coding protein_coding MGP_CBAJ_T0058518.1 MGP_CBAJ_G0026481.1 mouse_genomes_project 2 173907095 173934857 - MGP_CBAJ_P0058518 Tti1 protein_coding protein_coding MGP_CBAJ_T0058519.1 MGP_CBAJ_G0026481.1 mouse_genomes_project 2 173920682 173932707 - Tti1 protein_coding processed_transcript MGP_CBAJ_T0058520.1 MGP_CBAJ_G0026481.1 mouse_genomes_project 2 173934264 173936937 - MGP_CBAJ_P0058520 Tti1 protein_coding protein_coding MGP_CBAJ_T0052520.1 MGP_CBAJ_G0025112.1 mouse_genomes_project 2 22751448 22818328 - MGP_CBAJ_P0052520 Spopl protein_coding protein_coding MGP_CBAJ_T0052521.1 MGP_CBAJ_G0025112.1 mouse_genomes_project 2 22755958 22818302 - MGP_CBAJ_P0052521 Spopl protein_coding nonsense_mediated_decay MGP_CBAJ_T0052522.1 MGP_CBAJ_G0025112.1 mouse_genomes_project 2 22756556 22818202 - MGP_CBAJ_P0052522 Spopl protein_coding nonsense_mediated_decay MGP_CBAJ_T0052523.1 MGP_CBAJ_G0025112.1 mouse_genomes_project 2 22756820 22760510 - Spopl protein_coding retained_intron MGP_CBAJ_T0052524.1 MGP_CBAJ_G0025112.1 mouse_genomes_project 2 22763135 22780467 - Spopl protein_coding retained_intron MGP_CBAJ_T0052525.1 MGP_CBAJ_G0025112.1 mouse_genomes_project 2 22790834 22818330 - MGP_CBAJ_P0052525 Spopl protein_coding nonsense_mediated_decay MGP_CBAJ_T0055824.1 MGP_CBAJ_G0025861.1 mouse_genomes_project 2 99943123 99992641 - MGP_CBAJ_P0055824 Creb3l1 protein_coding protein_coding MGP_CBAJ_T0052303.1 MGP_CBAJ_G0025073.1 mouse_genomes_project 2 12512285 12567894 + MGP_CBAJ_P0052303 Tmem236 protein_coding protein_coding MGP_CBAJ_T0057260.1 MGP_CBAJ_G0026194.1 mouse_genomes_project 2 142853199 142861059 - Snrpb protein_coding retained_intron MGP_CBAJ_T0057261.1 MGP_CBAJ_G0026194.1 mouse_genomes_project 2 142853420 142861159 - MGP_CBAJ_P0057261 Snrpb protein_coding protein_coding MGP_CBAJ_T0057262.1 MGP_CBAJ_G0026194.1 mouse_genomes_project 2 142853573 142861159 - MGP_CBAJ_P0057262 Snrpb protein_coding nonsense_mediated_decay MGP_CBAJ_T0057263.1 MGP_CBAJ_G0026194.1 mouse_genomes_project 2 142858609 142861090 - Snrpb protein_coding retained_intron MGP_CBAJ_T0054356.1 MGP_CBAJ_G0025434.1 mouse_genomes_project 2 51969839 52085124 + MGP_CBAJ_P0054356 Epc2 protein_coding protein_coding MGP_CBAJ_T0054357.1 MGP_CBAJ_G0025434.1 mouse_genomes_project 2 52060038 52068245 + MGP_CBAJ_P0054357 Epc2 protein_coding protein_coding MGP_CBAJ_T0010248.1 MGP_CBAJ_G0008386.1 mouse_genomes_project 2 12622857 12622936 + Mir511 miRNA miRNA MGP_CBAJ_T0013371.1 MGP_CBAJ_G0011483.1 mouse_genomes_project 2 59253519 59253752 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0058671.1 MGP_CBAJ_G0026514.1 mouse_genomes_project 2 179890232 179956089 - MGP_CBAJ_P0058671 Jph2 protein_coding protein_coding MGP_CBAJ_T0058672.1 MGP_CBAJ_G0026514.1 mouse_genomes_project 2 179890232 179956133 - MGP_CBAJ_P0058672 Jph2 protein_coding protein_coding MGP_CBAJ_T0056443.1 MGP_CBAJ_G0026017.1 mouse_genomes_project 2 129891424 129899922 - MGP_CBAJ_P0056443 protein_coding protein_coding MGP_CBAJ_T0056444.1 MGP_CBAJ_G0026017.1 mouse_genomes_project 2 129894758 129899886 - protein_coding retained_intron MGP_CBAJ_T0055521.1 MGP_CBAJ_G0025782.1 mouse_genomes_project 2 96605979 96606915 - MGP_CBAJ_P0055521 Olfr1221 protein_coding protein_coding MGP_CBAJ_T0017658.1 MGP_CBAJ_G0015233.1 mouse_genomes_project 2 182865366 182866717 + BC046401 processed_transcript processed_transcript MGP_CBAJ_T0004100.1 MGP_CBAJ_G0003620.1 mouse_genomes_project 2 188517704 188520075 + Gm14637 antisense antisense MGP_CBAJ_T0013495.1 MGP_CBAJ_G0011607.1 mouse_genomes_project 2 104058989 104059109 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0056625.1 MGP_CBAJ_G0026060.1 mouse_genomes_project 2 131641357 131685664 - MGP_CBAJ_P0056625 Vps39 protein_coding protein_coding MGP_CBAJ_T0056626.1 MGP_CBAJ_G0026060.1 mouse_genomes_project 2 131641357 131685652 - MGP_CBAJ_P0056626 Vps39 protein_coding protein_coding MGP_CBAJ_T0056627.1 MGP_CBAJ_G0026060.1 mouse_genomes_project 2 131641732 131685648 - Vps39 protein_coding processed_transcript MGP_CBAJ_T0056628.1 MGP_CBAJ_G0026060.1 mouse_genomes_project 2 131642949 131644497 - Vps39 protein_coding retained_intron MGP_CBAJ_T0056629.1 MGP_CBAJ_G0026060.1 mouse_genomes_project 2 131644760 131648431 - Vps39 protein_coding retained_intron MGP_CBAJ_T0056630.1 MGP_CBAJ_G0026060.1 mouse_genomes_project 2 131646793 131685636 - Vps39 protein_coding retained_intron MGP_CBAJ_T0056631.1 MGP_CBAJ_G0026060.1 mouse_genomes_project 2 131650792 131663310 - Vps39 protein_coding retained_intron MGP_CBAJ_T0056632.1 MGP_CBAJ_G0026060.1 mouse_genomes_project 2 131668240 131676691 - Vps39 protein_coding processed_transcript MGP_CBAJ_T0056633.1 MGP_CBAJ_G0026060.1 mouse_genomes_project 2 131675737 131685648 - Vps39 protein_coding processed_transcript MGP_CBAJ_T0056634.1 MGP_CBAJ_G0026060.1 mouse_genomes_project 2 131680941 131685652 - Vps39 protein_coding processed_transcript MGP_CBAJ_T0054373.1 MGP_CBAJ_G0025438.1 mouse_genomes_project 2 52877452 52894017 - Mmadhc protein_coding processed_transcript MGP_CBAJ_T0054374.1 MGP_CBAJ_G0025438.1 mouse_genomes_project 2 52877452 52894039 - MGP_CBAJ_P0054374 Mmadhc protein_coding protein_coding MGP_CBAJ_T0054375.1 MGP_CBAJ_G0025438.1 mouse_genomes_project 2 52877921 52894009 - Mmadhc protein_coding processed_transcript MGP_CBAJ_T0054376.1 MGP_CBAJ_G0025438.1 mouse_genomes_project 2 52878712 52894003 - MGP_CBAJ_P0054376 Mmadhc protein_coding protein_coding MGP_CBAJ_T0054377.1 MGP_CBAJ_G0025438.1 mouse_genomes_project 2 52878725 52893745 - Mmadhc protein_coding processed_transcript MGP_CBAJ_T0054378.1 MGP_CBAJ_G0025438.1 mouse_genomes_project 2 52878737 52886771 - Mmadhc protein_coding processed_transcript MGP_CBAJ_T0054379.1 MGP_CBAJ_G0025438.1 mouse_genomes_project 2 52885424 52893998 - Mmadhc protein_coding processed_transcript MGP_CBAJ_T0054380.1 MGP_CBAJ_G0025438.1 mouse_genomes_project 2 52885437 52894123 - MGP_CBAJ_P0054380 Mmadhc protein_coding protein_coding MGP_CBAJ_T0007074.1 MGP_CBAJ_G0005796.1 mouse_genomes_project 2 34495066 34497594 - 9430024E24Rik lincRNA lincRNA MGP_CBAJ_T0052487.1 MGP_CBAJ_G0025106.1 mouse_genomes_project 2 22090069 22203398 - MGP_CBAJ_P0052487 Abi1 protein_coding protein_coding MGP_CBAJ_T0052488.1 MGP_CBAJ_G0025106.1 mouse_genomes_project 2 22090069 22203444 - MGP_CBAJ_P0052488 Abi1 protein_coding protein_coding MGP_CBAJ_T0052489.1 MGP_CBAJ_G0025106.1 mouse_genomes_project 2 22090082 22203444 - MGP_CBAJ_P0052489 Abi1 protein_coding protein_coding MGP_CBAJ_T0052490.1 MGP_CBAJ_G0025106.1 mouse_genomes_project 2 22090304 22203325 - MGP_CBAJ_P0052490 Abi1 protein_coding protein_coding MGP_CBAJ_T0052491.1 MGP_CBAJ_G0025106.1 mouse_genomes_project 2 22090360 22203390 - MGP_CBAJ_P0052491 Abi1 protein_coding protein_coding MGP_CBAJ_T0052492.1 MGP_CBAJ_G0025106.1 mouse_genomes_project 2 22090360 22203307 - MGP_CBAJ_P0052492 Abi1 protein_coding protein_coding MGP_CBAJ_T0052493.1 MGP_CBAJ_G0025106.1 mouse_genomes_project 2 22090360 22203340 - MGP_CBAJ_P0052493 Abi1 protein_coding protein_coding MGP_CBAJ_T0052494.1 MGP_CBAJ_G0025106.1 mouse_genomes_project 2 22090365 22203433 - MGP_CBAJ_P0052494 Abi1 protein_coding protein_coding MGP_CBAJ_T0052495.1 MGP_CBAJ_G0025106.1 mouse_genomes_project 2 22090365 22203388 - MGP_CBAJ_P0052495 Abi1 protein_coding protein_coding MGP_CBAJ_T0052496.1 MGP_CBAJ_G0025106.1 mouse_genomes_project 2 22090888 22203343 - MGP_CBAJ_P0052496 Abi1 protein_coding protein_coding MGP_CBAJ_T0052497.1 MGP_CBAJ_G0025106.1 mouse_genomes_project 2 22091229 22203422 - MGP_CBAJ_P0052497 Abi1 protein_coding protein_coding MGP_CBAJ_T0052498.1 MGP_CBAJ_G0025106.1 mouse_genomes_project 2 22091804 22096987 - Abi1 protein_coding retained_intron MGP_CBAJ_T0052499.1 MGP_CBAJ_G0025106.1 mouse_genomes_project 2 22091808 22100049 - Abi1 protein_coding retained_intron MGP_CBAJ_T0052500.1 MGP_CBAJ_G0025106.1 mouse_genomes_project 2 22096459 22115346 - Abi1 protein_coding retained_intron MGP_CBAJ_T0052501.1 MGP_CBAJ_G0025106.1 mouse_genomes_project 2 22099972 22117105 - Abi1 protein_coding retained_intron MGP_CBAJ_T0004016.1 MGP_CBAJ_G0003556.1 mouse_genomes_project 2 145087688 145178255 + Gm14051 antisense antisense MGP_CBAJ_T0055757.1 MGP_CBAJ_G0025850.1 mouse_genomes_project 2 99427053 99527130 + MGP_CBAJ_P0055757 Ckap5 protein_coding protein_coding MGP_CBAJ_T0055758.1 MGP_CBAJ_G0025850.1 mouse_genomes_project 2 99427269 99457863 + Ckap5 protein_coding processed_transcript MGP_CBAJ_T0055759.1 MGP_CBAJ_G0025850.1 mouse_genomes_project 2 99448782 99470322 + Ckap5 protein_coding retained_intron MGP_CBAJ_T0055760.1 MGP_CBAJ_G0025850.1 mouse_genomes_project 2 99448784 99527128 + MGP_CBAJ_P0055760 Ckap5 protein_coding protein_coding MGP_CBAJ_T0055761.1 MGP_CBAJ_G0025850.1 mouse_genomes_project 2 99448784 99527128 + MGP_CBAJ_P0055761 Ckap5 protein_coding protein_coding MGP_CBAJ_T0055762.1 MGP_CBAJ_G0025850.1 mouse_genomes_project 2 99448795 99527129 + MGP_CBAJ_P0055762 Ckap5 protein_coding protein_coding MGP_CBAJ_T0055763.1 MGP_CBAJ_G0025850.1 mouse_genomes_project 2 99457738 99470325 + Ckap5 protein_coding retained_intron MGP_CBAJ_T0055764.1 MGP_CBAJ_G0025850.1 mouse_genomes_project 2 99499779 99513107 + Ckap5 protein_coding processed_transcript MGP_CBAJ_T0055765.1 MGP_CBAJ_G0025850.1 mouse_genomes_project 2 99501102 99505698 + Ckap5 protein_coding retained_intron MGP_CBAJ_T0052120.1 MGP_CBAJ_G0025045.1 mouse_genomes_project 2 7668862 7698513 - MGP_CBAJ_P0052120 Gata3 protein_coding protein_coding MGP_CBAJ_T0052121.1 MGP_CBAJ_G0025045.1 mouse_genomes_project 2 7678510 7693540 - Gata3 protein_coding processed_transcript MGP_CBAJ_T0052122.1 MGP_CBAJ_G0025045.1 mouse_genomes_project 2 7694354 7695267 - Gata3 protein_coding processed_transcript MGP_CBAJ_T0052123.1 MGP_CBAJ_G0025045.1 mouse_genomes_project 2 7694569 7710117 - MGP_CBAJ_P0052123 Gata3 protein_coding protein_coding MGP_CBAJ_T0052124.1 MGP_CBAJ_G0025045.1 mouse_genomes_project 2 7697702 7707867 - Gata3 protein_coding processed_transcript MGP_CBAJ_T0052125.1 MGP_CBAJ_G0025045.1 mouse_genomes_project 2 7697757 7710085 - Gata3 protein_coding processed_transcript MGP_CBAJ_T0058063.1 MGP_CBAJ_G0026398.1 mouse_genomes_project 2 169233081 169245485 + MGP_CBAJ_P0058063 Bpifb6 protein_coding protein_coding MGP_CBAJ_T0058064.1 MGP_CBAJ_G0026398.1 mouse_genomes_project 2 169233088 169239617 + MGP_CBAJ_P0058064 Bpifb6 protein_coding protein_coding MGP_CBAJ_T0004108.1 MGP_CBAJ_G0003625.1 mouse_genomes_project 2 191610184 191611915 + Pmepa1os antisense antisense MGP_CBAJ_T0010359.1 MGP_CBAJ_G0008497.1 mouse_genomes_project 2 186763055 186763176 + Gm26469 miRNA miRNA MGP_CBAJ_T0056038.1 MGP_CBAJ_G0025900.1 mouse_genomes_project 2 112280036 112304460 + MGP_CBAJ_P0056038 Apip protein_coding protein_coding MGP_CBAJ_T0056039.1 MGP_CBAJ_G0025900.1 mouse_genomes_project 2 112280056 112304447 + Apip protein_coding processed_transcript MGP_CBAJ_T0056040.1 MGP_CBAJ_G0025900.1 mouse_genomes_project 2 112289331 112303605 + Apip protein_coding processed_transcript MGP_CBAJ_T0056041.1 MGP_CBAJ_G0025900.1 mouse_genomes_project 2 112303650 112304454 + Apip protein_coding processed_transcript MGP_CBAJ_T0055988.1 MGP_CBAJ_G0025890.1 mouse_genomes_project 2 110750451 110758244 + Traf6 protein_coding processed_transcript MGP_CBAJ_T0055989.1 MGP_CBAJ_G0025890.1 mouse_genomes_project 2 110750462 110773695 + MGP_CBAJ_P0055989 Traf6 protein_coding protein_coding MGP_CBAJ_T0055990.1 MGP_CBAJ_G0025890.1 mouse_genomes_project 2 110756223 110762097 + Traf6 protein_coding processed_transcript MGP_CBAJ_T0011377.1 MGP_CBAJ_G0009515.1 mouse_genomes_project 2 84304481 84304711 - Gm23149 misc_RNA misc_RNA MGP_CBAJ_T0013305.1 MGP_CBAJ_G0011417.1 mouse_genomes_project 2 34033836 34034103 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0058640.1 MGP_CBAJ_G0026506.1 mouse_genomes_project 2 179396009 179396634 - MGP_CBAJ_P0058640 Cisd3 protein_coding protein_coding MGP_CBAJ_T0017481.1 MGP_CBAJ_G0015138.1 mouse_genomes_project 2 16839347 16841788 - 1810059C17Rik processed_transcript processed_transcript MGP_CBAJ_T0013442.1 MGP_CBAJ_G0011554.1 mouse_genomes_project 2 85221488 85222019 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013362.1 MGP_CBAJ_G0011474.1 mouse_genomes_project 2 55523621 55524070 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0052997.1 MGP_CBAJ_G0025201.1 mouse_genomes_project 2 25996799 26037177 - MGP_CBAJ_P0052997 Sec16a protein_coding protein_coding MGP_CBAJ_T0052998.1 MGP_CBAJ_G0025201.1 mouse_genomes_project 2 25996799 26019125 - MGP_CBAJ_P0052998 Sec16a protein_coding protein_coding MGP_CBAJ_T0052999.1 MGP_CBAJ_G0025201.1 mouse_genomes_project 2 25996801 26037179 - MGP_CBAJ_P0052999 Sec16a protein_coding protein_coding MGP_CBAJ_T0053000.1 MGP_CBAJ_G0025201.1 mouse_genomes_project 2 25997657 26000431 - Sec16a protein_coding processed_transcript MGP_CBAJ_T0053001.1 MGP_CBAJ_G0025201.1 mouse_genomes_project 2 25998087 26003608 - Sec16a protein_coding processed_transcript MGP_CBAJ_T0053002.1 MGP_CBAJ_G0025201.1 mouse_genomes_project 2 26001756 26007134 - Sec16a protein_coding processed_transcript MGP_CBAJ_T0053003.1 MGP_CBAJ_G0025201.1 mouse_genomes_project 2 26028118 26031718 - MGP_CBAJ_P0053003 Sec16a protein_coding protein_coding MGP_CBAJ_T0053004.1 MGP_CBAJ_G0025201.1 mouse_genomes_project 2 26033926 26037163 - Sec16a protein_coding processed_transcript MGP_CBAJ_T0053864.1 MGP_CBAJ_G0025336.1 mouse_genomes_project 2 33441492 33448540 - MGP_CBAJ_P0053864 Cfap157 protein_coding protein_coding MGP_CBAJ_T0053865.1 MGP_CBAJ_G0025336.1 mouse_genomes_project 2 33442326 33443258 - Cfap157 protein_coding retained_intron MGP_CBAJ_T0056902.1 MGP_CBAJ_G0026100.1 mouse_genomes_project 2 133600630 133647830 + MGP_CBAJ_P0056902 Eif3j1 protein_coding protein_coding MGP_CBAJ_T0056904.1 MGP_CBAJ_G0026100.1 mouse_genomes_project 2 133600736 133601518 + Eif3j1 protein_coding processed_transcript MGP_CBAJ_T0013309.1 MGP_CBAJ_G0011421.1 mouse_genomes_project 2 35885620 35885787 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017488.1 MGP_CBAJ_G0015142.1 mouse_genomes_project 2 25306171 25316804 - Gm13538 processed_transcript processed_transcript MGP_CBAJ_T0056407.1 MGP_CBAJ_G0026009.1 mouse_genomes_project 2 129368622 129474830 - MGP_CBAJ_P0056407 Gpr176 protein_coding protein_coding MGP_CBAJ_T0058004.1 MGP_CBAJ_G0026384.1 mouse_genomes_project 2 168329164 168377091 + Tm9sf4 protein_coding processed_transcript MGP_CBAJ_T0058005.1 MGP_CBAJ_G0026384.1 mouse_genomes_project 2 168329164 168382695 + MGP_CBAJ_P0058005 Tm9sf4 protein_coding protein_coding MGP_CBAJ_T0058006.1 MGP_CBAJ_G0026384.1 mouse_genomes_project 2 168329402 168360632 + Tm9sf4 protein_coding processed_transcript MGP_CBAJ_T0058007.1 MGP_CBAJ_G0026384.1 mouse_genomes_project 2 168329409 168365103 + Tm9sf4 protein_coding retained_intron MGP_CBAJ_T0058008.1 MGP_CBAJ_G0026384.1 mouse_genomes_project 2 168361966 168363755 + Tm9sf4 protein_coding retained_intron MGP_CBAJ_T0058009.1 MGP_CBAJ_G0026384.1 mouse_genomes_project 2 168362493 168373285 + Tm9sf4 protein_coding processed_transcript MGP_CBAJ_T0058010.1 MGP_CBAJ_G0026384.1 mouse_genomes_project 2 168365908 168376131 + Tm9sf4 protein_coding processed_transcript MGP_CBAJ_T0058011.1 MGP_CBAJ_G0026384.1 mouse_genomes_project 2 168367097 168371439 + Tm9sf4 protein_coding processed_transcript MGP_CBAJ_T0058012.1 MGP_CBAJ_G0026384.1 mouse_genomes_project 2 168372771 168382695 + Tm9sf4 protein_coding retained_intron MGP_CBAJ_T0058013.1 MGP_CBAJ_G0026384.1 mouse_genomes_project 2 168374363 168382695 + Tm9sf4 protein_coding retained_intron MGP_CBAJ_T0001039.1 MGP_CBAJ_G0000971.1 mouse_genomes_project 2 39762824 39765420 - TEC TEC MGP_CBAJ_T0010337.1 MGP_CBAJ_G0008475.1 mouse_genomes_project 2 146646587 146646674 + Mir3090 miRNA miRNA MGP_CBAJ_T0001054.1 MGP_CBAJ_G0000986.1 mouse_genomes_project 2 84766581 84904034 + TEC TEC MGP_CBAJ_T0013672.1 MGP_CBAJ_G0011784.1 mouse_genomes_project 2 179267836 179268169 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055911.1 MGP_CBAJ_G0025875.1 mouse_genomes_project 2 101738102 101740585 + MGP_CBAJ_P0055911 Gm10803 protein_coding protein_coding MGP_CBAJ_T0054213.1 MGP_CBAJ_G0025415.1 mouse_genomes_project 2 39817847 39878992 - MGP_CBAJ_P0054213 Psmb7 protein_coding protein_coding MGP_CBAJ_T0054214.1 MGP_CBAJ_G0025415.1 mouse_genomes_project 2 39845061 39878825 - Psmb7 protein_coding retained_intron MGP_CBAJ_T0099145.1 MGP_CBAJ_G0037400.1 mouse_genomes_project 2 200181148 200181252 + Gm24892 snRNA snRNA MGP_CBAJ_T0013491.1 MGP_CBAJ_G0011603.1 mouse_genomes_project 2 102158476 102159056 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0056431.1 MGP_CBAJ_G0026014.1 mouse_genomes_project 2 129791116 129825686 + MGP_CBAJ_P0056431 Pak6 protein_coding protein_coding MGP_CBAJ_T0056432.1 MGP_CBAJ_G0026014.1 mouse_genomes_project 2 129791575 129792767 + Pak6 protein_coding retained_intron MGP_CBAJ_T0056433.1 MGP_CBAJ_G0026014.1 mouse_genomes_project 2 129791877 129805470 + Pak6 protein_coding processed_transcript MGP_CBAJ_T0056434.1 MGP_CBAJ_G0026014.1 mouse_genomes_project 2 129804928 129825684 + MGP_CBAJ_P0056434 Pak6 protein_coding protein_coding MGP_CBAJ_T0056435.1 MGP_CBAJ_G0026014.1 mouse_genomes_project 2 129804962 129824891 + Pak6 protein_coding retained_intron MGP_CBAJ_T0052187.1 MGP_CBAJ_G0025057.1 mouse_genomes_project 2 9670495 9671154 - MGP_CBAJ_P0052187 Gm17490 protein_coding protein_coding MGP_CBAJ_T0054141.1 MGP_CBAJ_G0025396.1 mouse_genomes_project 2 38095968 38096961 - MGP_CBAJ_P0054141 Olfr358 protein_coding protein_coding MGP_CBAJ_T0100406.1 MGP_CBAJ_G0038661.1 mouse_genomes_project 2 165921835 165921964 + Gm22187 snoRNA snoRNA MGP_CBAJ_T0003982.1 MGP_CBAJ_G0003531.1 mouse_genomes_project 2 124211106 124231524 - 4930533B01Rik antisense antisense MGP_CBAJ_T0058825.1 MGP_CBAJ_G0026570.1 mouse_genomes_project 2 181598155 181620514 + MGP_CBAJ_P0058825 Zswim3 protein_coding protein_coding MGP_CBAJ_T0013493.1 MGP_CBAJ_G0011605.1 mouse_genomes_project 2 102891109 102891710 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013454.1 MGP_CBAJ_G0011566.1 mouse_genomes_project 2 89786192 89786676 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010319.1 MGP_CBAJ_G0008457.1 mouse_genomes_project 2 115580842 115580967 + Gm22002 miRNA miRNA MGP_CBAJ_T0055453.1 MGP_CBAJ_G0025720.1 mouse_genomes_project 2 94590795 94593384 - MGP_CBAJ_P0055453 protein_coding protein_coding MGP_CBAJ_T0101830.1 MGP_CBAJ_G0039861.1 mouse_genomes_project 2 152762161 152762390 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0058811.1 MGP_CBAJ_G0026567.1 mouse_genomes_project 2 181561811 181564392 - MGP_CBAJ_P0058811 Tnnc2 protein_coding protein_coding MGP_CBAJ_T0058812.1 MGP_CBAJ_G0026567.1 mouse_genomes_project 2 181562594 181564618 - Tnnc2 protein_coding processed_transcript MGP_CBAJ_T0017495.1 MGP_CBAJ_G0015146.1 mouse_genomes_project 2 27306949 27309886 + Gm13421 processed_transcript processed_transcript MGP_CBAJ_T0017496.1 MGP_CBAJ_G0015146.1 mouse_genomes_project 2 27306952 27309709 + Gm13421 processed_transcript processed_transcript MGP_CBAJ_T0055423.1 MGP_CBAJ_G0025698.1 mouse_genomes_project 2 93917513 93918488 + MGP_CBAJ_P0055423 Olfr1102 protein_coding protein_coding MGP_CBAJ_T0100393.1 MGP_CBAJ_G0038648.1 mouse_genomes_project 2 142754348 142754477 + Gm24665 snoRNA snoRNA MGP_CBAJ_T0056155.1 MGP_CBAJ_G0025924.1 mouse_genomes_project 2 114563903 114567558 + MGP_CBAJ_P0056155 Gm11060 protein_coding protein_coding MGP_CBAJ_T0055086.1 MGP_CBAJ_G0025581.1 mouse_genomes_project 2 82280790 82290814 - MGP_CBAJ_P0055086 Fkbp7 protein_coding protein_coding MGP_CBAJ_T0055087.1 MGP_CBAJ_G0025581.1 mouse_genomes_project 2 82280809 82282990 - Fkbp7 protein_coding processed_transcript MGP_CBAJ_T0055088.1 MGP_CBAJ_G0025581.1 mouse_genomes_project 2 82283453 82290860 - MGP_CBAJ_P0055088 Fkbp7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0055089.1 MGP_CBAJ_G0025581.1 mouse_genomes_project 2 82289105 82290829 - Fkbp7 protein_coding retained_intron MGP_CBAJ_T0058122.1 MGP_CBAJ_G0026416.1 mouse_genomes_project 2 169993279 169993780 - MGP_CBAJ_P0058122 4930519P11Rik protein_coding protein_coding MGP_CBAJ_T0003888.1 MGP_CBAJ_G0003468.1 mouse_genomes_project 2 39496282 39498267 + Gm13556 antisense antisense MGP_CBAJ_T0055529.1 MGP_CBAJ_G0025789.1 mouse_genomes_project 2 96782238 96783257 - MGP_CBAJ_P0055529 Olfr1229 protein_coding protein_coding MGP_CBAJ_T0055530.1 MGP_CBAJ_G0025789.1 mouse_genomes_project 2 96782295 96788051 - MGP_CBAJ_P0055530 Olfr1229 protein_coding protein_coding MGP_CBAJ_T0057575.1 MGP_CBAJ_G0026259.1 mouse_genomes_project 2 150281830 150301325 - MGP_CBAJ_P0057575 Mkks protein_coding protein_coding MGP_CBAJ_T0057576.1 MGP_CBAJ_G0026259.1 mouse_genomes_project 2 150281830 150301332 - MGP_CBAJ_P0057576 Mkks protein_coding protein_coding MGP_CBAJ_T0057577.1 MGP_CBAJ_G0026259.1 mouse_genomes_project 2 150289269 150301097 - MGP_CBAJ_P0057577 Mkks protein_coding protein_coding MGP_CBAJ_T0054969.1 MGP_CBAJ_G0025549.1 mouse_genomes_project 2 78545362 78570580 + MGP_CBAJ_P0054969 Scrn3 protein_coding protein_coding MGP_CBAJ_T0054970.1 MGP_CBAJ_G0025549.1 mouse_genomes_project 2 78545415 78553558 + MGP_CBAJ_P0054970 Scrn3 protein_coding protein_coding MGP_CBAJ_T0054971.1 MGP_CBAJ_G0025549.1 mouse_genomes_project 2 78545420 78548563 + Scrn3 protein_coding processed_transcript MGP_CBAJ_T0054972.1 MGP_CBAJ_G0025549.1 mouse_genomes_project 2 78545420 78562564 + Scrn3 protein_coding processed_transcript MGP_CBAJ_T0054973.1 MGP_CBAJ_G0025549.1 mouse_genomes_project 2 78545437 78554784 + Scrn3 protein_coding processed_transcript MGP_CBAJ_T0054974.1 MGP_CBAJ_G0025549.1 mouse_genomes_project 2 78552161 78569061 + Scrn3 protein_coding processed_transcript MGP_CBAJ_T0056729.1 MGP_CBAJ_G0026072.1 mouse_genomes_project 2 132364940 132409271 + MGP_CBAJ_P0056729 Tmem62 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056730.1 MGP_CBAJ_G0026072.1 mouse_genomes_project 2 132365222 132409263 + MGP_CBAJ_P0056730 Tmem62 protein_coding protein_coding MGP_CBAJ_T0056731.1 MGP_CBAJ_G0026072.1 mouse_genomes_project 2 132365593 132368463 + Tmem62 protein_coding retained_intron MGP_CBAJ_T0056732.1 MGP_CBAJ_G0026072.1 mouse_genomes_project 2 132368927 132389872 + Tmem62 protein_coding processed_transcript MGP_CBAJ_T0056733.1 MGP_CBAJ_G0026072.1 mouse_genomes_project 2 132374895 132377484 + Tmem62 protein_coding processed_transcript MGP_CBAJ_T0056734.1 MGP_CBAJ_G0026072.1 mouse_genomes_project 2 132395778 132408462 + Tmem62 protein_coding retained_intron MGP_CBAJ_T0059494.1 MGP_CBAJ_G0026715.1 mouse_genomes_project 2 200407242 200410280 + MGP_CBAJ_P0059494 Lime1 protein_coding protein_coding MGP_CBAJ_T0059495.1 MGP_CBAJ_G0026715.1 mouse_genomes_project 2 200408399 200410793 + MGP_CBAJ_P0059495 Lime1 protein_coding protein_coding MGP_CBAJ_T0059496.1 MGP_CBAJ_G0026715.1 mouse_genomes_project 2 200408522 200410719 + Lime1 protein_coding retained_intron MGP_CBAJ_T0059497.1 MGP_CBAJ_G0026715.1 mouse_genomes_project 2 200408522 200410119 + Lime1 protein_coding retained_intron MGP_CBAJ_T0059498.1 MGP_CBAJ_G0026715.1 mouse_genomes_project 2 200408522 200410788 + MGP_CBAJ_P0059498 Lime1 protein_coding protein_coding MGP_CBAJ_T0059499.1 MGP_CBAJ_G0026715.1 mouse_genomes_project 2 200409036 200410793 + MGP_CBAJ_P0059499 Lime1 protein_coding protein_coding MGP_CBAJ_T0059501.1 MGP_CBAJ_G0026715.1 mouse_genomes_project 2 200409650 200410478 + Lime1 protein_coding retained_intron MGP_CBAJ_T0056937.1 MGP_CBAJ_G0026113.1 mouse_genomes_project 2 134113660 134115939 + protein_coding retained_intron MGP_CBAJ_T0098315.1 MGP_CBAJ_G0036582.1 mouse_genomes_project 2 159488516 159530780 + Gm14093 sense_intronic sense_intronic MGP_CBAJ_T0058591.1 MGP_CBAJ_G0026498.1 mouse_genomes_project 2 176796508 176854433 - MGP_CBAJ_P0058591 protein_coding protein_coding MGP_CBAJ_T0056590.1 MGP_CBAJ_G0026051.1 mouse_genomes_project 2 131269175 131326909 + MGP_CBAJ_P0056590 Mapkbp1 protein_coding protein_coding MGP_CBAJ_T0056591.1 MGP_CBAJ_G0026051.1 mouse_genomes_project 2 131269530 131326903 + MGP_CBAJ_P0056591 Mapkbp1 protein_coding unknown_likely_coding MGP_CBAJ_T0056592.1 MGP_CBAJ_G0026051.1 mouse_genomes_project 2 131311019 131312428 + Mapkbp1 protein_coding retained_intron MGP_CBAJ_T0056593.1 MGP_CBAJ_G0026051.1 mouse_genomes_project 2 131312376 131314953 + Mapkbp1 protein_coding retained_intron MGP_CBAJ_T0056594.1 MGP_CBAJ_G0026051.1 mouse_genomes_project 2 131321578 131322552 + Mapkbp1 protein_coding retained_intron MGP_CBAJ_T0059079.1 MGP_CBAJ_G0026618.1 mouse_genomes_project 2 185671791 185720666 - MGP_CBAJ_P0059079 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054785.1 MGP_CBAJ_G0025514.1 mouse_genomes_project 2 74420231 74448466 - MGP_CBAJ_P0054785 Fastkd1 protein_coding protein_coding MGP_CBAJ_T0054786.1 MGP_CBAJ_G0025514.1 mouse_genomes_project 2 74420353 74448318 - MGP_CBAJ_P0054786 Fastkd1 protein_coding protein_coding MGP_CBAJ_T0054787.1 MGP_CBAJ_G0025514.1 mouse_genomes_project 2 74441009 74449368 - Fastkd1 protein_coding retained_intron MGP_CBAJ_T0054788.1 MGP_CBAJ_G0025514.1 mouse_genomes_project 2 74445677 74449386 - Fastkd1 protein_coding retained_intron MGP_CBAJ_T0003869.1 MGP_CBAJ_G0003452.1 mouse_genomes_project 2 31567905 31569783 - Gm13405 antisense antisense MGP_CBAJ_T0100392.1 MGP_CBAJ_G0038647.1 mouse_genomes_project 2 142738571 142738658 + Gm22424 snoRNA snoRNA MGP_CBAJ_T0003830.1 MGP_CBAJ_G0003423.1 mouse_genomes_project 2 16263132 16264071 + Gm13324 antisense antisense MGP_CBAJ_T0055197.1 MGP_CBAJ_G0025596.1 mouse_genomes_project 2 86263928 86273262 + Dnajc10 protein_coding processed_transcript MGP_CBAJ_T0055198.1 MGP_CBAJ_G0025596.1 mouse_genomes_project 2 86263928 86309677 + MGP_CBAJ_P0055198 Dnajc10 protein_coding protein_coding MGP_CBAJ_T0055199.1 MGP_CBAJ_G0025596.1 mouse_genomes_project 2 86280453 86286839 + Dnajc10 protein_coding processed_transcript MGP_CBAJ_T0055200.1 MGP_CBAJ_G0025596.1 mouse_genomes_project 2 86286738 86293998 + Dnajc10 protein_coding processed_transcript MGP_CBAJ_T0055201.1 MGP_CBAJ_G0025596.1 mouse_genomes_project 2 86303287 86306575 + Dnajc10 protein_coding processed_transcript MGP_CBAJ_T0053783.1 MGP_CBAJ_G0025323.1 mouse_genomes_project 2 33206599 33208100 - MGP_CBAJ_P0053783 9430097D07Rik protein_coding protein_coding MGP_CBAJ_T0052019.1 MGP_CBAJ_G0025029.1 mouse_genomes_project 2 2098994 2125430 + MGP_CBAJ_P0052019 Phyh protein_coding protein_coding MGP_CBAJ_T0052020.1 MGP_CBAJ_G0025029.1 mouse_genomes_project 2 2099055 2109122 + Phyh protein_coding processed_transcript MGP_CBAJ_T0052021.1 MGP_CBAJ_G0025029.1 mouse_genomes_project 2 2124182 2125043 + Phyh protein_coding processed_transcript MGP_CBAJ_T0013398.1 MGP_CBAJ_G0011510.1 mouse_genomes_project 2 69525107 69526117 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0057398.1 MGP_CBAJ_G0026225.1 mouse_genomes_project 2 144008249 144019790 + MGP_CBAJ_P0057398 Cdc25b protein_coding protein_coding MGP_CBAJ_T0057399.1 MGP_CBAJ_G0026225.1 mouse_genomes_project 2 144008258 144019792 + MGP_CBAJ_P0057399 Cdc25b protein_coding protein_coding MGP_CBAJ_T0057400.1 MGP_CBAJ_G0026225.1 mouse_genomes_project 2 144009458 144013213 + Cdc25b protein_coding retained_intron MGP_CBAJ_T0057401.1 MGP_CBAJ_G0026225.1 mouse_genomes_project 2 144012644 144013397 + Cdc25b protein_coding retained_intron MGP_CBAJ_T0057402.1 MGP_CBAJ_G0026225.1 mouse_genomes_project 2 144013037 144014687 + Cdc25b protein_coding retained_intron MGP_CBAJ_T0057403.1 MGP_CBAJ_G0026225.1 mouse_genomes_project 2 144013107 144014574 + Cdc25b protein_coding retained_intron MGP_CBAJ_T0057404.1 MGP_CBAJ_G0026225.1 mouse_genomes_project 2 144014168 144015701 + Cdc25b protein_coding retained_intron MGP_CBAJ_T0058855.1 MGP_CBAJ_G0026576.1 mouse_genomes_project 2 181694199 181700301 + Pcif1 protein_coding retained_intron MGP_CBAJ_T0058856.1 MGP_CBAJ_G0026576.1 mouse_genomes_project 2 181694260 181711568 + MGP_CBAJ_P0058856 Pcif1 protein_coding protein_coding MGP_CBAJ_T0058857.1 MGP_CBAJ_G0026576.1 mouse_genomes_project 2 181694947 181700212 + Pcif1 protein_coding retained_intron MGP_CBAJ_T0058858.1 MGP_CBAJ_G0026576.1 mouse_genomes_project 2 181701034 181701796 + Pcif1 protein_coding retained_intron MGP_CBAJ_T0013439.1 MGP_CBAJ_G0011551.1 mouse_genomes_project 2 84615747 84615915 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011397.1 MGP_CBAJ_G0009535.1 mouse_genomes_project 2 192748985 192749049 + Gm27899 misc_RNA misc_RNA MGP_CBAJ_T0001056.1 MGP_CBAJ_G0000988.1 mouse_genomes_project 2 112596913 112600317 - TEC TEC MGP_CBAJ_T0058026.1 MGP_CBAJ_G0026389.1 mouse_genomes_project 2 168569479 168634123 + MGP_CBAJ_P0058026 Asxl1 protein_coding protein_coding MGP_CBAJ_T0058027.1 MGP_CBAJ_G0026389.1 mouse_genomes_project 2 168569968 168634130 + MGP_CBAJ_P0058027 Asxl1 protein_coding unknown_likely_coding MGP_CBAJ_T0058028.1 MGP_CBAJ_G0026389.1 mouse_genomes_project 2 168571309 168580776 + Asxl1 protein_coding processed_transcript MGP_CBAJ_T0058029.1 MGP_CBAJ_G0026389.1 mouse_genomes_project 2 168571437 168621711 + Asxl1 protein_coding processed_transcript MGP_CBAJ_T0058030.1 MGP_CBAJ_G0026389.1 mouse_genomes_project 2 168622976 168626954 + Asxl1 protein_coding retained_intron MGP_CBAJ_T0058084.1 MGP_CBAJ_G0026406.1 mouse_genomes_project 2 169530418 169562867 + MGP_CBAJ_P0058084 Bpifb1 protein_coding protein_coding MGP_CBAJ_T0058085.1 MGP_CBAJ_G0026406.1 mouse_genomes_project 2 169530423 169562840 + Bpifb1 protein_coding retained_intron MGP_CBAJ_T0058086.1 MGP_CBAJ_G0026406.1 mouse_genomes_project 2 169539980 169562841 + MGP_CBAJ_P0058086 Bpifb1 protein_coding protein_coding MGP_CBAJ_T0003953.1 MGP_CBAJ_G0003513.1 mouse_genomes_project 2 86364122 86372476 + Gm13752 antisense antisense MGP_CBAJ_T0003838.1 MGP_CBAJ_G0003431.1 mouse_genomes_project 2 20076520 20077464 + Gm13375 antisense antisense MGP_CBAJ_T0013440.1 MGP_CBAJ_G0011552.1 mouse_genomes_project 2 84824784 84825235 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013404.1 MGP_CBAJ_G0011516.1 mouse_genomes_project 2 71358539 71359032 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101824.1 MGP_CBAJ_G0039855.1 mouse_genomes_project 2 119456231 119481557 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0053391.1 MGP_CBAJ_G0025267.1 mouse_genomes_project 2 30273349 30297046 + MGP_CBAJ_P0053391 Tbc1d13 protein_coding protein_coding MGP_CBAJ_T0053392.1 MGP_CBAJ_G0025267.1 mouse_genomes_project 2 30273349 30276902 + MGP_CBAJ_P0053392 Tbc1d13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053393.1 MGP_CBAJ_G0025267.1 mouse_genomes_project 2 30273375 30274758 + Tbc1d13 protein_coding retained_intron MGP_CBAJ_T0053394.1 MGP_CBAJ_G0025267.1 mouse_genomes_project 2 30273394 30276785 + Tbc1d13 protein_coding processed_transcript MGP_CBAJ_T0053395.1 MGP_CBAJ_G0025267.1 mouse_genomes_project 2 30273409 30276282 + MGP_CBAJ_P0053395 Tbc1d13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053396.1 MGP_CBAJ_G0025267.1 mouse_genomes_project 2 30273424 30277119 + Tbc1d13 protein_coding processed_transcript MGP_CBAJ_T0053397.1 MGP_CBAJ_G0025267.1 mouse_genomes_project 2 30276635 30281730 + Tbc1d13 protein_coding processed_transcript MGP_CBAJ_T0053398.1 MGP_CBAJ_G0025267.1 mouse_genomes_project 2 30281484 30286284 + Tbc1d13 protein_coding retained_intron MGP_CBAJ_T0052408.1 MGP_CBAJ_G0025091.1 mouse_genomes_project 2 17916886 17918356 + MGP_CBAJ_P0052408 4930426L09Rik protein_coding protein_coding MGP_CBAJ_T0003833.1 MGP_CBAJ_G0003426.1 mouse_genomes_project 2 18406127 18411281 - Ptf1aos antisense antisense MGP_CBAJ_T0057056.1 MGP_CBAJ_G0026142.1 mouse_genomes_project 2 138987924 139044931 + Usp8 protein_coding processed_transcript MGP_CBAJ_T0057057.1 MGP_CBAJ_G0026142.1 mouse_genomes_project 2 138987939 139044980 + MGP_CBAJ_P0057057 Usp8 protein_coding protein_coding MGP_CBAJ_T0057058.1 MGP_CBAJ_G0026142.1 mouse_genomes_project 2 138987956 139044973 + MGP_CBAJ_P0057058 Usp8 protein_coding protein_coding MGP_CBAJ_T0057038.1 MGP_CBAJ_G0026139.1 mouse_genomes_project 2 138803807 138839645 + MGP_CBAJ_P0057038 Slc27a2 protein_coding protein_coding MGP_CBAJ_T0057039.1 MGP_CBAJ_G0026139.1 mouse_genomes_project 2 138804990 138816146 + Slc27a2 protein_coding processed_transcript MGP_CBAJ_T0057040.1 MGP_CBAJ_G0026139.1 mouse_genomes_project 2 138807520 138839339 + MGP_CBAJ_P0057040 Slc27a2 protein_coding protein_coding MGP_CBAJ_T0057041.1 MGP_CBAJ_G0026139.1 mouse_genomes_project 2 138816220 138826918 + Slc27a2 protein_coding processed_transcript MGP_CBAJ_T0007061.1 MGP_CBAJ_G0005786.1 mouse_genomes_project 2 25698062 25699060 + 1810012K08Rik lincRNA lincRNA MGP_CBAJ_T0059322.1 MGP_CBAJ_G0026682.1 mouse_genomes_project 2 199057488 199060759 - Lama5 protein_coding processed_transcript MGP_CBAJ_T0059323.1 MGP_CBAJ_G0026682.1 mouse_genomes_project 2 199057488 199110988 - MGP_CBAJ_P0059323 Lama5 protein_coding protein_coding MGP_CBAJ_T0059324.1 MGP_CBAJ_G0026682.1 mouse_genomes_project 2 199057569 199058703 - Lama5 protein_coding processed_transcript MGP_CBAJ_T0059325.1 MGP_CBAJ_G0026682.1 mouse_genomes_project 2 199058283 199059519 - Lama5 protein_coding processed_transcript MGP_CBAJ_T0057214.1 MGP_CBAJ_G0026182.1 mouse_genomes_project 2 141668696 141697790 + MGP_CBAJ_P0057214 Polr1b protein_coding protein_coding MGP_CBAJ_T0057215.1 MGP_CBAJ_G0026182.1 mouse_genomes_project 2 141668728 141692107 + MGP_CBAJ_P0057215 Polr1b protein_coding protein_coding MGP_CBAJ_T0057216.1 MGP_CBAJ_G0026182.1 mouse_genomes_project 2 141687010 141689828 + Polr1b protein_coding processed_transcript MGP_CBAJ_T0057217.1 MGP_CBAJ_G0026182.1 mouse_genomes_project 2 141689992 141694334 + Polr1b protein_coding processed_transcript MGP_CBAJ_T0057218.1 MGP_CBAJ_G0026182.1 mouse_genomes_project 2 141693074 141695034 + Polr1b protein_coding processed_transcript MGP_CBAJ_T0052336.1 MGP_CBAJ_G0025080.1 mouse_genomes_project 2 14945811 15388284 + MGP_CBAJ_P0052336 Plxdc2 protein_coding protein_coding MGP_CBAJ_T0052337.1 MGP_CBAJ_G0025080.1 mouse_genomes_project 2 14946394 15384134 + MGP_CBAJ_P0052337 Plxdc2 protein_coding protein_coding MGP_CBAJ_T0052338.1 MGP_CBAJ_G0025080.1 mouse_genomes_project 2 14946624 15384302 + MGP_CBAJ_P0052338 Plxdc2 protein_coding protein_coding MGP_CBAJ_T0052339.1 MGP_CBAJ_G0025080.1 mouse_genomes_project 2 15263902 15384135 + Plxdc2 protein_coding processed_transcript MGP_CBAJ_T0055496.1 MGP_CBAJ_G0025760.1 mouse_genomes_project 2 95861320 95862232 + MGP_CBAJ_P0055496 Olfr1186 protein_coding protein_coding MGP_CBAJ_T0003848.1 MGP_CBAJ_G0003437.1 mouse_genomes_project 2 25306848 25309176 + antisense antisense MGP_CBAJ_T0100411.1 MGP_CBAJ_G0038666.1 mouse_genomes_project 2 171196135 171196268 - Gm22334 snoRNA snoRNA MGP_CBAJ_T0003910.1 MGP_CBAJ_G0003484.1 mouse_genomes_project 2 69482477 69483397 + Gm13594 antisense antisense MGP_CBAJ_T0054123.1 MGP_CBAJ_G0025379.1 mouse_genomes_project 2 37550355 37551297 - MGP_CBAJ_P0054123 Olfr341 protein_coding protein_coding MGP_CBAJ_T0059082.1 MGP_CBAJ_G0026619.1 mouse_genomes_project 2 185699821 185720681 - MGP_CBAJ_P0059082 Gm20716 protein_coding protein_coding MGP_CBAJ_T0059083.1 MGP_CBAJ_G0026619.1 mouse_genomes_project 2 185701054 185708485 - Gm20716 protein_coding retained_intron MGP_CBAJ_T0059084.1 MGP_CBAJ_G0026619.1 mouse_genomes_project 2 185701054 185720893 - MGP_CBAJ_P0059084 Gm20716 protein_coding protein_coding MGP_CBAJ_T0059085.1 MGP_CBAJ_G0026619.1 mouse_genomes_project 2 185701055 185706750 - Gm20716 protein_coding retained_intron MGP_CBAJ_T0059086.1 MGP_CBAJ_G0026619.1 mouse_genomes_project 2 185701289 185704035 - Gm20716 protein_coding retained_intron MGP_CBAJ_T0059087.1 MGP_CBAJ_G0026619.1 mouse_genomes_project 2 185701315 185720630 - MGP_CBAJ_P0059087 Gm20716 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059088.1 MGP_CBAJ_G0026619.1 mouse_genomes_project 2 185701361 185713619 - Gm20716 protein_coding retained_intron MGP_CBAJ_T0059089.1 MGP_CBAJ_G0026619.1 mouse_genomes_project 2 185702157 185720378 - Gm20716 protein_coding processed_transcript MGP_CBAJ_T0059090.1 MGP_CBAJ_G0026619.1 mouse_genomes_project 2 185708397 185720532 - Gm20716 protein_coding retained_intron MGP_CBAJ_T0059091.1 MGP_CBAJ_G0026619.1 mouse_genomes_project 2 185710258 185720664 - Gm20716 protein_coding retained_intron MGP_CBAJ_T0056156.1 MGP_CBAJ_G0025925.1 mouse_genomes_project 2 114604929 114667158 + MGP_CBAJ_P0056156 Wt1 protein_coding protein_coding MGP_CBAJ_T0056157.1 MGP_CBAJ_G0025925.1 mouse_genomes_project 2 114605396 114662609 + MGP_CBAJ_P0056157 Wt1 protein_coding protein_coding MGP_CBAJ_T0056158.1 MGP_CBAJ_G0025925.1 mouse_genomes_project 2 114605401 114662532 + MGP_CBAJ_P0056158 Wt1 protein_coding protein_coding MGP_CBAJ_T0056159.1 MGP_CBAJ_G0025925.1 mouse_genomes_project 2 114605610 114666228 + MGP_CBAJ_P0056159 Wt1 protein_coding protein_coding MGP_CBAJ_T0056160.1 MGP_CBAJ_G0025925.1 mouse_genomes_project 2 114609189 114612318 + Wt1 protein_coding retained_intron MGP_CBAJ_T0056161.1 MGP_CBAJ_G0025925.1 mouse_genomes_project 2 114609272 114667162 + MGP_CBAJ_P0056161 Wt1 protein_coding protein_coding MGP_CBAJ_T0056162.1 MGP_CBAJ_G0025925.1 mouse_genomes_project 2 114609272 114667158 + MGP_CBAJ_P0056162 Wt1 protein_coding protein_coding MGP_CBAJ_T0056163.1 MGP_CBAJ_G0025925.1 mouse_genomes_project 2 114653090 114660278 + Wt1 protein_coding retained_intron MGP_CBAJ_T0013350.1 MGP_CBAJ_G0011462.1 mouse_genomes_project 2 53037703 53037985 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100426.1 MGP_CBAJ_G0038681.1 mouse_genomes_project 2 186513824 186513953 - Gm25214 snoRNA snoRNA MGP_CBAJ_T0013674.1 MGP_CBAJ_G0011786.1 mouse_genomes_project 2 179379521 179380211 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0054731.1 MGP_CBAJ_G0025502.1 mouse_genomes_project 2 72724662 73028036 - MGP_CBAJ_P0054731 Stk39 protein_coding protein_coding MGP_CBAJ_T0054732.1 MGP_CBAJ_G0025502.1 mouse_genomes_project 2 72724665 72900528 - Stk39 protein_coding retained_intron MGP_CBAJ_T0054733.1 MGP_CBAJ_G0025502.1 mouse_genomes_project 2 72725957 72740642 - Stk39 protein_coding processed_transcript MGP_CBAJ_T0054734.1 MGP_CBAJ_G0025502.1 mouse_genomes_project 2 72725957 72769675 - Stk39 protein_coding processed_transcript MGP_CBAJ_T0054735.1 MGP_CBAJ_G0025502.1 mouse_genomes_project 2 72725957 72769680 - Stk39 protein_coding processed_transcript MGP_CBAJ_T0054736.1 MGP_CBAJ_G0025502.1 mouse_genomes_project 2 72725963 72769653 - Stk39 protein_coding processed_transcript MGP_CBAJ_T0054737.1 MGP_CBAJ_G0025502.1 mouse_genomes_project 2 72783036 73027708 - Stk39 protein_coding retained_intron MGP_CBAJ_T0054738.1 MGP_CBAJ_G0025502.1 mouse_genomes_project 2 72889718 72927193 - Stk39 protein_coding processed_transcript MGP_CBAJ_T0055056.1 MGP_CBAJ_G0025570.1 mouse_genomes_project 2 81161336 81194398 - MGP_CBAJ_P0055056 Nfe2l2 protein_coding protein_coding MGP_CBAJ_T0055057.1 MGP_CBAJ_G0025570.1 mouse_genomes_project 2 81180808 81194246 - Nfe2l2 protein_coding processed_transcript MGP_CBAJ_T0058742.1 MGP_CBAJ_G0026538.1 mouse_genomes_project 2 180917398 180953548 + MGP_CBAJ_P0058742 Svs3a protein_coding protein_coding MGP_CBAJ_T0052405.1 MGP_CBAJ_G0025090.1 mouse_genomes_project 2 17757638 17916670 - MGP_CBAJ_P0052405 Pip4k2a protein_coding protein_coding MGP_CBAJ_T0052406.1 MGP_CBAJ_G0025090.1 mouse_genomes_project 2 17759754 17781497 - MGP_CBAJ_P0052406 Pip4k2a protein_coding protein_coding MGP_CBAJ_T0052407.1 MGP_CBAJ_G0025090.1 mouse_genomes_project 2 17762880 17822410 - MGP_CBAJ_P0052407 Pip4k2a protein_coding protein_coding MGP_CBAJ_T0058167.1 MGP_CBAJ_G0026426.1 mouse_genomes_project 2 170775410 170777197 + MGP_CBAJ_P0058167 Map1lc3a protein_coding protein_coding MGP_CBAJ_T0058168.1 MGP_CBAJ_G0026426.1 mouse_genomes_project 2 170775656 170777194 + Map1lc3a protein_coding processed_transcript MGP_CBAJ_T0058169.1 MGP_CBAJ_G0026426.1 mouse_genomes_project 2 170776002 170777192 + Map1lc3a protein_coding processed_transcript MGP_CBAJ_T0007303.1 MGP_CBAJ_G0005981.1 mouse_genomes_project 2 185238087 185247375 - 1200007C13Rik lincRNA lincRNA MGP_CBAJ_T0007207.1 MGP_CBAJ_G0005903.1 mouse_genomes_project 2 128839025 128840575 - Gm28183 lincRNA lincRNA MGP_CBAJ_T0007073.1 MGP_CBAJ_G0005795.1 mouse_genomes_project 2 34248505 34262362 + Gm13530 lincRNA lincRNA MGP_CBAJ_T0004041.1 MGP_CBAJ_G0003571.1 mouse_genomes_project 2 158445260 158446441 + 1700108N11Rik antisense antisense MGP_CBAJ_T0055049.1 MGP_CBAJ_G0025567.1 mouse_genomes_project 2 80146857 80149018 + MGP_CBAJ_P0055049 Hoxd1 protein_coding protein_coding MGP_CBAJ_T0010265.1 MGP_CBAJ_G0008403.1 mouse_genomes_project 2 29492989 29493069 - Mir133c miRNA miRNA MGP_CBAJ_T0007118.1 MGP_CBAJ_G0005833.1 mouse_genomes_project 2 76751522 76762966 + Platr26 lincRNA lincRNA MGP_CBAJ_T0001061.1 MGP_CBAJ_G0000992.1 mouse_genomes_project 2 141783518 141784559 - TEC TEC MGP_CBAJ_T0003851.1 MGP_CBAJ_G0003440.1 mouse_genomes_project 2 25965750 25971483 + Gm13563 antisense antisense MGP_CBAJ_T0003852.1 MGP_CBAJ_G0003440.1 mouse_genomes_project 2 25969776 25972019 + Gm13563 antisense antisense MGP_CBAJ_T0003853.1 MGP_CBAJ_G0003440.1 mouse_genomes_project 2 25971681 25973243 + Gm13563 antisense antisense MGP_CBAJ_T0100341.1 MGP_CBAJ_G0038596.1 mouse_genomes_project 2 18952487 18952578 + Gm25859 snoRNA snoRNA MGP_CBAJ_T0017542.1 MGP_CBAJ_G0015180.1 mouse_genomes_project 2 95451251 95456353 - processed_transcript processed_transcript MGP_CBAJ_T0010276.1 MGP_CBAJ_G0008414.1 mouse_genomes_project 2 33293596 33293682 + Mir1954 miRNA miRNA MGP_CBAJ_T0056141.1 MGP_CBAJ_G0025919.1 mouse_genomes_project 2 114137377 114164239 - MGP_CBAJ_P0056141 Depdc7 protein_coding protein_coding MGP_CBAJ_T0056142.1 MGP_CBAJ_G0025919.1 mouse_genomes_project 2 114138174 114138749 - Depdc7 protein_coding retained_intron MGP_CBAJ_T0013354.1 MGP_CBAJ_G0011466.1 mouse_genomes_project 2 53585638 53587510 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000986.1 MGP_CBAJ_G0000918.1 mouse_genomes_project 2 3918462 3923311 + TEC TEC MGP_CBAJ_T0100367.1 MGP_CBAJ_G0038622.1 mouse_genomes_project 2 61076816 61076967 - Gm25388 snoRNA snoRNA MGP_CBAJ_T0052335.1 MGP_CBAJ_G0025079.1 mouse_genomes_project 2 14009309 14826942 + MGP_CBAJ_P0052335 Malrd1 protein_coding protein_coding MGP_CBAJ_T0055384.1 MGP_CBAJ_G0025660.1 mouse_genomes_project 2 92662603 92665515 + MGP_CBAJ_P0055384 Olfr1032 protein_coding protein_coding MGP_CBAJ_T0011374.1 MGP_CBAJ_G0009512.1 mouse_genomes_project 2 73040200 73040442 + Gm26321 misc_RNA misc_RNA MGP_CBAJ_T0055042.1 MGP_CBAJ_G0025566.1 mouse_genomes_project 2 80100405 80128148 + MGP_CBAJ_P0055042 Gm28230 protein_coding nonsense_mediated_decay MGP_CBAJ_T0013330.1 MGP_CBAJ_G0011442.1 mouse_genomes_project 2 40944303 40945400 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0056001.1 MGP_CBAJ_G0025892.1 mouse_genomes_project 2 110979543 110990268 + Commd9 protein_coding processed_transcript MGP_CBAJ_T0056002.1 MGP_CBAJ_G0025892.1 mouse_genomes_project 2 110979549 110994974 + MGP_CBAJ_P0056002 Commd9 protein_coding protein_coding MGP_CBAJ_T0056003.1 MGP_CBAJ_G0025892.1 mouse_genomes_project 2 110979556 110990534 + Commd9 protein_coding retained_intron MGP_CBAJ_T0056004.1 MGP_CBAJ_G0025892.1 mouse_genomes_project 2 110979559 110988727 + Commd9 protein_coding retained_intron MGP_CBAJ_T0100353.1 MGP_CBAJ_G0038608.1 mouse_genomes_project 2 33322887 33323024 + Gm26236 snoRNA snoRNA MGP_CBAJ_T0057010.1 MGP_CBAJ_G0026133.1 mouse_genomes_project 2 137971527 138001258 - MGP_CBAJ_P0057010 Cops2 protein_coding protein_coding MGP_CBAJ_T0057011.1 MGP_CBAJ_G0026133.1 mouse_genomes_project 2 137972830 138001158 - MGP_CBAJ_P0057011 Cops2 protein_coding protein_coding MGP_CBAJ_T0057012.1 MGP_CBAJ_G0026133.1 mouse_genomes_project 2 137972833 138001258 - MGP_CBAJ_P0057012 Cops2 protein_coding protein_coding MGP_CBAJ_T0057013.1 MGP_CBAJ_G0026133.1 mouse_genomes_project 2 137984887 138001115 - Cops2 protein_coding processed_transcript MGP_CBAJ_T0057014.1 MGP_CBAJ_G0026133.1 mouse_genomes_project 2 137991888 138001182 - Cops2 protein_coding processed_transcript MGP_CBAJ_T0058859.1 MGP_CBAJ_G0026577.1 mouse_genomes_project 2 181708995 181729190 - MGP_CBAJ_P0058859 Zfp335 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058860.1 MGP_CBAJ_G0026577.1 mouse_genomes_project 2 181708995 181729190 - MGP_CBAJ_P0058860 Zfp335 protein_coding protein_coding MGP_CBAJ_T0058861.1 MGP_CBAJ_G0026577.1 mouse_genomes_project 2 181719791 181725098 - MGP_CBAJ_P0058861 Zfp335 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056166.1 MGP_CBAJ_G0025927.1 mouse_genomes_project 2 114904424 114920197 - MGP_CBAJ_P0056166 Rcn1 protein_coding protein_coding MGP_CBAJ_T0056167.1 MGP_CBAJ_G0025927.1 mouse_genomes_project 2 114905062 114916231 - Rcn1 protein_coding retained_intron MGP_CBAJ_T0013548.1 MGP_CBAJ_G0011660.1 mouse_genomes_project 2 123880140 123880665 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0057522.1 MGP_CBAJ_G0026249.1 mouse_genomes_project 2 145953920 146000461 - Fermt1 protein_coding retained_intron MGP_CBAJ_T0057523.1 MGP_CBAJ_G0026249.1 mouse_genomes_project 2 145953920 146000738 - MGP_CBAJ_P0057523 Fermt1 protein_coding protein_coding MGP_CBAJ_T0057524.1 MGP_CBAJ_G0026249.1 mouse_genomes_project 2 145990984 145996978 - Fermt1 protein_coding processed_transcript MGP_CBAJ_T0057525.1 MGP_CBAJ_G0026249.1 mouse_genomes_project 2 145993967 145996844 - Fermt1 protein_coding processed_transcript MGP_CBAJ_T0007075.1 MGP_CBAJ_G0005797.1 mouse_genomes_project 2 34740223 34746549 - lincRNA lincRNA MGP_CBAJ_T0007076.1 MGP_CBAJ_G0005797.1 mouse_genomes_project 2 34742330 34746581 - lincRNA lincRNA MGP_CBAJ_T0100386.1 MGP_CBAJ_G0038641.1 mouse_genomes_project 2 117918497 117918628 - Gm23749 snoRNA snoRNA MGP_CBAJ_T0100362.1 MGP_CBAJ_G0038617.1 mouse_genomes_project 2 48897738 48897855 - Gm25264 snoRNA snoRNA MGP_CBAJ_T0056282.1 MGP_CBAJ_G0025964.1 mouse_genomes_project 2 121815230 121816169 - MGP_CBAJ_P0056282 protein_coding protein_coding MGP_CBAJ_T0007314.1 MGP_CBAJ_G0005991.1 mouse_genomes_project 2 187146031 187152432 + Gm14250 lincRNA lincRNA MGP_CBAJ_T0057369.1 MGP_CBAJ_G0026218.1 mouse_genomes_project 2 143849284 143852730 - Adam33 protein_coding retained_intron MGP_CBAJ_T0057370.1 MGP_CBAJ_G0026218.1 mouse_genomes_project 2 143849510 143862507 - MGP_CBAJ_P0057370 Adam33 protein_coding protein_coding MGP_CBAJ_T0057371.1 MGP_CBAJ_G0026218.1 mouse_genomes_project 2 143849518 143862262 - Adam33 protein_coding retained_intron MGP_CBAJ_T0057372.1 MGP_CBAJ_G0026218.1 mouse_genomes_project 2 143849556 143855061 - MGP_CBAJ_P0057372 Adam33 protein_coding protein_coding MGP_CBAJ_T0057373.1 MGP_CBAJ_G0026218.1 mouse_genomes_project 2 143849568 143862238 - MGP_CBAJ_P0057373 Adam33 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057374.1 MGP_CBAJ_G0026218.1 mouse_genomes_project 2 143849802 143862507 - MGP_CBAJ_P0057374 Adam33 protein_coding protein_coding MGP_CBAJ_T0057375.1 MGP_CBAJ_G0026218.1 mouse_genomes_project 2 143849803 143855175 - Adam33 protein_coding retained_intron MGP_CBAJ_T0057376.1 MGP_CBAJ_G0026218.1 mouse_genomes_project 2 143851735 143853220 - MGP_CBAJ_P0057376 Adam33 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057377.1 MGP_CBAJ_G0026218.1 mouse_genomes_project 2 143851783 143853210 - Adam33 protein_coding processed_transcript MGP_CBAJ_T0057378.1 MGP_CBAJ_G0026218.1 mouse_genomes_project 2 143851914 143852753 - Adam33 protein_coding processed_transcript MGP_CBAJ_T0057379.1 MGP_CBAJ_G0026218.1 mouse_genomes_project 2 143852215 143853223 - Adam33 protein_coding retained_intron MGP_CBAJ_T0057380.1 MGP_CBAJ_G0026218.1 mouse_genomes_project 2 143856227 143862206 - MGP_CBAJ_P0057380 Adam33 protein_coding protein_coding MGP_CBAJ_T0057381.1 MGP_CBAJ_G0026218.1 mouse_genomes_project 2 143860746 143862236 - Adam33 protein_coding retained_intron MGP_CBAJ_T0059560.1 MGP_CBAJ_G0026725.1 mouse_genomes_project 2 200753783 200755588 - MGP_CBAJ_P0059560 Sox18 protein_coding protein_coding MGP_CBAJ_T0055458.1 MGP_CBAJ_G0025725.1 mouse_genomes_project 2 94738358 94740962 - MGP_CBAJ_P0055458 protein_coding protein_coding MGP_CBAJ_T0055460.1 MGP_CBAJ_G0025725.1 mouse_genomes_project 2 94738836 94740962 - protein_coding processed_transcript MGP_CBAJ_T0054822.1 MGP_CBAJ_G0025521.1 mouse_genomes_project 2 74672007 74816673 + MGP_CBAJ_P0054822 Ubr3 protein_coding protein_coding MGP_CBAJ_T0054823.1 MGP_CBAJ_G0025521.1 mouse_genomes_project 2 74672007 74816673 + MGP_CBAJ_P0054823 Ubr3 protein_coding protein_coding MGP_CBAJ_T0054824.1 MGP_CBAJ_G0025521.1 mouse_genomes_project 2 74672064 74724754 + MGP_CBAJ_P0054824 Ubr3 protein_coding protein_coding MGP_CBAJ_T0054825.1 MGP_CBAJ_G0025521.1 mouse_genomes_project 2 74720305 74731395 + Ubr3 protein_coding processed_transcript MGP_CBAJ_T0054826.1 MGP_CBAJ_G0025521.1 mouse_genomes_project 2 74779955 74800148 + MGP_CBAJ_P0054826 Ubr3 protein_coding protein_coding MGP_CBAJ_T0054827.1 MGP_CBAJ_G0025521.1 mouse_genomes_project 2 74784907 74815205 + Ubr3 protein_coding processed_transcript MGP_CBAJ_T0054828.1 MGP_CBAJ_G0025521.1 mouse_genomes_project 2 74791670 74800286 + Ubr3 protein_coding processed_transcript MGP_CBAJ_T0054829.1 MGP_CBAJ_G0025521.1 mouse_genomes_project 2 74799966 74809125 + Ubr3 protein_coding processed_transcript MGP_CBAJ_T0054830.1 MGP_CBAJ_G0025521.1 mouse_genomes_project 2 74812787 74813846 + Ubr3 protein_coding processed_transcript MGP_CBAJ_T0054831.1 MGP_CBAJ_G0025521.1 mouse_genomes_project 2 74813171 74814880 + Ubr3 protein_coding processed_transcript MGP_CBAJ_T0013656.1 MGP_CBAJ_G0011768.1 mouse_genomes_project 2 172321034 172321674 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013368.1 MGP_CBAJ_G0011480.1 mouse_genomes_project 2 58500570 58501596 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013624.1 MGP_CBAJ_G0011736.1 mouse_genomes_project 2 161818240 161818549 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007160.1 MGP_CBAJ_G0005868.1 mouse_genomes_project 2 100567627 100580982 - Gm13817 lincRNA lincRNA MGP_CBAJ_T0003813.1 MGP_CBAJ_G0003410.1 mouse_genomes_project 2 1720204 1721468 - Gm13179 antisense antisense MGP_CBAJ_T0003814.1 MGP_CBAJ_G0003410.1 mouse_genomes_project 2 1720508 1721468 - Gm13179 antisense antisense MGP_CBAJ_T0013645.1 MGP_CBAJ_G0011757.1 mouse_genomes_project 2 170125631 170125852 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007132.1 MGP_CBAJ_G0005844.1 mouse_genomes_project 2 79644568 79653344 - 4930441J16Rik lincRNA lincRNA MGP_CBAJ_T0017629.1 MGP_CBAJ_G0015221.1 mouse_genomes_project 2 165505708 165507150 + E130215H24Rik processed_transcript processed_transcript MGP_CBAJ_T0054953.1 MGP_CBAJ_G0025544.1 mouse_genomes_project 2 78111617 78164771 - MGP_CBAJ_P0054953 Sp3 protein_coding protein_coding MGP_CBAJ_T0054954.1 MGP_CBAJ_G0025544.1 mouse_genomes_project 2 78111838 78164751 - MGP_CBAJ_P0054954 Sp3 protein_coding protein_coding MGP_CBAJ_T0054955.1 MGP_CBAJ_G0025544.1 mouse_genomes_project 2 78111842 78163590 - Sp3 protein_coding processed_transcript MGP_CBAJ_T0054956.1 MGP_CBAJ_G0025544.1 mouse_genomes_project 2 78113470 78116275 - Sp3 protein_coding processed_transcript MGP_CBAJ_T0054957.1 MGP_CBAJ_G0025544.1 mouse_genomes_project 2 78123698 78154770 - Sp3 protein_coding processed_transcript MGP_CBAJ_T0013650.1 MGP_CBAJ_G0011762.1 mouse_genomes_project 2 171009856 171010182 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0053183.1 MGP_CBAJ_G0025235.1 mouse_genomes_project 2 28381788 28388160 + Gbgt1 protein_coding processed_transcript MGP_CBAJ_T0053184.1 MGP_CBAJ_G0025235.1 mouse_genomes_project 2 28381788 28390313 + MGP_CBAJ_P0053184 Gbgt1 protein_coding protein_coding MGP_CBAJ_T0053185.1 MGP_CBAJ_G0025235.1 mouse_genomes_project 2 28382643 28390313 + MGP_CBAJ_P0053185 Gbgt1 protein_coding protein_coding MGP_CBAJ_T0013321.1 MGP_CBAJ_G0011433.1 mouse_genomes_project 2 39716906 39717041 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003949.1 MGP_CBAJ_G0003510.1 mouse_genomes_project 2 80572990 80766348 + 2600014E21Rik antisense antisense MGP_CBAJ_T0017502.1 MGP_CBAJ_G0015151.1 mouse_genomes_project 2 30468379 30488917 - Gm14471 processed_transcript processed_transcript MGP_CBAJ_T0059314.1 MGP_CBAJ_G0026681.1 mouse_genomes_project 2 199051927 199057402 + MGP_CBAJ_P0059314 Gm9774 protein_coding protein_coding MGP_CBAJ_T0059315.1 MGP_CBAJ_G0026681.1 mouse_genomes_project 2 199052037 199052881 + Gm9774 protein_coding retained_intron MGP_CBAJ_T0059316.1 MGP_CBAJ_G0026681.1 mouse_genomes_project 2 199052048 199057400 + Gm9774 protein_coding retained_intron MGP_CBAJ_T0059317.1 MGP_CBAJ_G0026681.1 mouse_genomes_project 2 199052048 199053723 + Gm9774 protein_coding retained_intron MGP_CBAJ_T0059318.1 MGP_CBAJ_G0026681.1 mouse_genomes_project 2 199052056 199057251 + Gm9774 protein_coding retained_intron MGP_CBAJ_T0059319.1 MGP_CBAJ_G0026681.1 mouse_genomes_project 2 199052101 199057402 + Gm9774 protein_coding processed_transcript MGP_CBAJ_T0059320.1 MGP_CBAJ_G0026681.1 mouse_genomes_project 2 199052595 199057400 + Gm9774 protein_coding retained_intron MGP_CBAJ_T0059321.1 MGP_CBAJ_G0026681.1 mouse_genomes_project 2 199055796 199057398 + Gm9774 protein_coding retained_intron MGP_CBAJ_T0054418.1 MGP_CBAJ_G0025446.1 mouse_genomes_project 2 55267423 55299008 - MGP_CBAJ_P0054418 Arl5a protein_coding unknown_likely_coding MGP_CBAJ_T0054419.1 MGP_CBAJ_G0025446.1 mouse_genomes_project 2 55267424 55299274 - MGP_CBAJ_P0054419 Arl5a protein_coding protein_coding MGP_CBAJ_T0054420.1 MGP_CBAJ_G0025446.1 mouse_genomes_project 2 55271866 55281983 - Arl5a protein_coding retained_intron MGP_CBAJ_T0017554.1 MGP_CBAJ_G0015186.1 mouse_genomes_project 2 99018482 99025201 - Gm13783 processed_transcript processed_transcript MGP_CBAJ_T0004042.1 MGP_CBAJ_G0003572.1 mouse_genomes_project 2 159715869 159720200 - Gm14092 antisense antisense MGP_CBAJ_T0097804.1 MGP_CBAJ_G0036077.1 mouse_genomes_project 2 29784801 29785132 - pseudogene pseudogene MGP_CBAJ_T0003831.1 MGP_CBAJ_G0003424.1 mouse_genomes_project 2 16817708 16824798 + Gm13330 antisense antisense MGP_CBAJ_T0003854.1 MGP_CBAJ_G0003441.1 mouse_genomes_project 2 26254613 26263647 + antisense antisense MGP_CBAJ_T0003855.1 MGP_CBAJ_G0003441.1 mouse_genomes_project 2 26261017 26263647 + antisense antisense MGP_CBAJ_T0003856.1 MGP_CBAJ_G0003441.1 mouse_genomes_project 2 26261591 26263647 + antisense antisense MGP_CBAJ_T0013518.1 MGP_CBAJ_G0011630.1 mouse_genomes_project 2 113099257 113099541 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0052074.1 MGP_CBAJ_G0025039.1 mouse_genomes_project 2 3241823 3307770 - MGP_CBAJ_P0052074 Dhtkd1 protein_coding protein_coding MGP_CBAJ_T0052075.1 MGP_CBAJ_G0025039.1 mouse_genomes_project 2 3243691 3307721 - MGP_CBAJ_P0052075 Dhtkd1 protein_coding protein_coding MGP_CBAJ_T0052076.1 MGP_CBAJ_G0025039.1 mouse_genomes_project 2 3256688 3270003 - Dhtkd1 protein_coding processed_transcript MGP_CBAJ_T0052077.1 MGP_CBAJ_G0025039.1 mouse_genomes_project 2 3284134 3307649 - MGP_CBAJ_P0052077 Dhtkd1 protein_coding unknown_likely_coding MGP_CBAJ_T0017667.1 MGP_CBAJ_G0015238.1 mouse_genomes_project 2 190622512 190638905 - Gm14455 processed_transcript processed_transcript MGP_CBAJ_T0057739.1 MGP_CBAJ_G0026298.1 mouse_genomes_project 2 160471880 160774730 - MGP_CBAJ_P0057739 Ralgapa2 protein_coding protein_coding MGP_CBAJ_T0057740.1 MGP_CBAJ_G0026298.1 mouse_genomes_project 2 160475950 160703367 - MGP_CBAJ_P0057740 Ralgapa2 protein_coding protein_coding MGP_CBAJ_T0057741.1 MGP_CBAJ_G0026298.1 mouse_genomes_project 2 160476766 160493246 - Ralgapa2 protein_coding processed_transcript MGP_CBAJ_T0057742.1 MGP_CBAJ_G0026298.1 mouse_genomes_project 2 160480175 160774625 - MGP_CBAJ_P0057742 Ralgapa2 protein_coding protein_coding MGP_CBAJ_T0057743.1 MGP_CBAJ_G0026298.1 mouse_genomes_project 2 160490442 160642871 - MGP_CBAJ_P0057743 Ralgapa2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057744.1 MGP_CBAJ_G0026298.1 mouse_genomes_project 2 160559764 160774625 - MGP_CBAJ_P0057744 Ralgapa2 protein_coding unknown_likely_coding MGP_CBAJ_T0057745.1 MGP_CBAJ_G0026298.1 mouse_genomes_project 2 160610149 160664153 - Ralgapa2 protein_coding retained_intron MGP_CBAJ_T0057746.1 MGP_CBAJ_G0026298.1 mouse_genomes_project 2 160662706 160670774 - Ralgapa2 protein_coding retained_intron MGP_CBAJ_T0057747.1 MGP_CBAJ_G0026298.1 mouse_genomes_project 2 160677962 160774637 - Ralgapa2 protein_coding retained_intron MGP_CBAJ_T0057748.1 MGP_CBAJ_G0026298.1 mouse_genomes_project 2 160687318 160774730 - Ralgapa2 protein_coding retained_intron MGP_CBAJ_T0057749.1 MGP_CBAJ_G0026298.1 mouse_genomes_project 2 160747888 160774752 - Ralgapa2 protein_coding retained_intron MGP_CBAJ_T0056194.1 MGP_CBAJ_G0025929.1 mouse_genomes_project 2 115258094 115494123 - MGP_CBAJ_P0056194 Elp4 protein_coding protein_coding MGP_CBAJ_T0056195.1 MGP_CBAJ_G0025929.1 mouse_genomes_project 2 115290560 115447898 - MGP_CBAJ_P0056195 Elp4 protein_coding protein_coding MGP_CBAJ_T0056196.1 MGP_CBAJ_G0025929.1 mouse_genomes_project 2 115372908 115395983 - Elp4 protein_coding retained_intron MGP_CBAJ_T0056197.1 MGP_CBAJ_G0025929.1 mouse_genomes_project 2 115447985 115494042 - Elp4 protein_coding processed_transcript MGP_CBAJ_T0057884.1 MGP_CBAJ_G0026339.1 mouse_genomes_project 2 166567676 166595075 - MGP_CBAJ_P0057884 Rad21l protein_coding protein_coding MGP_CBAJ_T0057885.1 MGP_CBAJ_G0026339.1 mouse_genomes_project 2 166567676 166595075 - MGP_CBAJ_P0057885 Rad21l protein_coding protein_coding MGP_CBAJ_T0001043.1 MGP_CBAJ_G0000975.1 mouse_genomes_project 2 40503002 40506482 - TEC TEC MGP_CBAJ_T0100380.1 MGP_CBAJ_G0038635.1 mouse_genomes_project 2 105621393 105621516 + Gm22957 snoRNA snoRNA MGP_CBAJ_T0055374.1 MGP_CBAJ_G0025651.1 mouse_genomes_project 2 92457571 92458504 - MGP_CBAJ_P0055374 Olfr1019 protein_coding protein_coding MGP_CBAJ_T0054142.1 MGP_CBAJ_G0025397.1 mouse_genomes_project 2 38171369 38174881 + MGP_CBAJ_P0054142 Olfr360 protein_coding protein_coding MGP_CBAJ_T0054143.1 MGP_CBAJ_G0025397.1 mouse_genomes_project 2 38173927 38174881 + MGP_CBAJ_P0054143 Olfr360 protein_coding protein_coding MGP_CBAJ_T0013346.1 MGP_CBAJ_G0011458.1 mouse_genomes_project 2 51287221 51288192 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013325.1 MGP_CBAJ_G0011437.1 mouse_genomes_project 2 40542523 40542886 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013629.1 MGP_CBAJ_G0011741.1 mouse_genomes_project 2 163972836 163974554 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0052282.1 MGP_CBAJ_G0025069.1 mouse_genomes_project 2 11865210 11866117 + MGP_CBAJ_P0052282 Vim protein_coding protein_coding MGP_CBAJ_T0052283.1 MGP_CBAJ_G0025069.1 mouse_genomes_project 2 11865235 11874107 + MGP_CBAJ_P0052283 Vim protein_coding protein_coding MGP_CBAJ_T0052284.1 MGP_CBAJ_G0025069.1 mouse_genomes_project 2 11865564 11874106 + MGP_CBAJ_P0052284 Vim protein_coding protein_coding MGP_CBAJ_T0052285.1 MGP_CBAJ_G0025069.1 mouse_genomes_project 2 11865605 11869888 + Vim protein_coding retained_intron MGP_CBAJ_T0052286.1 MGP_CBAJ_G0025069.1 mouse_genomes_project 2 11865806 11868732 + Vim protein_coding retained_intron MGP_CBAJ_T0052287.1 MGP_CBAJ_G0025069.1 mouse_genomes_project 2 11870666 11873759 + Vim protein_coding retained_intron MGP_CBAJ_T0056802.1 MGP_CBAJ_G0026083.1 mouse_genomes_project 2 132736454 132783477 - MGP_CBAJ_P0056802 Ppip5k1 protein_coding protein_coding MGP_CBAJ_T0056803.1 MGP_CBAJ_G0026083.1 mouse_genomes_project 2 132736454 132783474 - MGP_CBAJ_P0056803 Ppip5k1 protein_coding protein_coding MGP_CBAJ_T0056804.1 MGP_CBAJ_G0026083.1 mouse_genomes_project 2 132736454 132779154 - MGP_CBAJ_P0056804 Ppip5k1 protein_coding protein_coding MGP_CBAJ_T0056805.1 MGP_CBAJ_G0026083.1 mouse_genomes_project 2 132736784 132779122 - MGP_CBAJ_P0056805 Ppip5k1 protein_coding protein_coding MGP_CBAJ_T0056806.1 MGP_CBAJ_G0026083.1 mouse_genomes_project 2 132736790 132783540 - MGP_CBAJ_P0056806 Ppip5k1 protein_coding protein_coding MGP_CBAJ_T0056807.1 MGP_CBAJ_G0026083.1 mouse_genomes_project 2 132747510 132765315 - MGP_CBAJ_P0056807 Ppip5k1 protein_coding protein_coding MGP_CBAJ_T0056808.1 MGP_CBAJ_G0026083.1 mouse_genomes_project 2 132747545 132762909 - MGP_CBAJ_P0056808 Ppip5k1 protein_coding protein_coding MGP_CBAJ_T0056809.1 MGP_CBAJ_G0026083.1 mouse_genomes_project 2 132747623 132764885 - MGP_CBAJ_P0056809 Ppip5k1 protein_coding protein_coding MGP_CBAJ_T0056810.1 MGP_CBAJ_G0026083.1 mouse_genomes_project 2 132752649 132783342 - MGP_CBAJ_P0056810 Ppip5k1 protein_coding unknown_likely_coding MGP_CBAJ_T0056811.1 MGP_CBAJ_G0026083.1 mouse_genomes_project 2 132753490 132765311 - MGP_CBAJ_P0056811 Ppip5k1 protein_coding protein_coding MGP_CBAJ_T0056812.1 MGP_CBAJ_G0026083.1 mouse_genomes_project 2 132754271 132765175 - Ppip5k1 protein_coding retained_intron MGP_CBAJ_T0056813.1 MGP_CBAJ_G0026083.1 mouse_genomes_project 2 132760529 132783221 - Ppip5k1 protein_coding retained_intron MGP_CBAJ_T0056814.1 MGP_CBAJ_G0026083.1 mouse_genomes_project 2 132762649 132770135 - Ppip5k1 protein_coding retained_intron MGP_CBAJ_T0056815.1 MGP_CBAJ_G0026083.1 mouse_genomes_project 2 132768517 132783455 - Ppip5k1 protein_coding retained_intron MGP_CBAJ_T0056816.1 MGP_CBAJ_G0026083.1 mouse_genomes_project 2 132771685 132776928 - MGP_CBAJ_P0056816 Ppip5k1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056817.1 MGP_CBAJ_G0026083.1 mouse_genomes_project 2 132774743 132783474 - Ppip5k1 protein_coding retained_intron MGP_CBAJ_T0056818.1 MGP_CBAJ_G0026083.1 mouse_genomes_project 2 132775164 132783219 - Ppip5k1 protein_coding retained_intron MGP_CBAJ_T0056819.1 MGP_CBAJ_G0026083.1 mouse_genomes_project 2 132776328 132783216 - Ppip5k1 protein_coding retained_intron MGP_CBAJ_T0056820.1 MGP_CBAJ_G0026083.1 mouse_genomes_project 2 132778613 132783428 - MGP_CBAJ_P0056820 Ppip5k1 protein_coding protein_coding MGP_CBAJ_T0052358.1 MGP_CBAJ_G0025084.1 mouse_genomes_project 2 16825840 16829737 - Skida1 protein_coding processed_transcript MGP_CBAJ_T0052359.1 MGP_CBAJ_G0025084.1 mouse_genomes_project 2 16829247 16834211 - MGP_CBAJ_P0052359 Skida1 protein_coding protein_coding MGP_CBAJ_T0052360.1 MGP_CBAJ_G0025084.1 mouse_genomes_project 2 16830417 16833614 - MGP_CBAJ_P0052360 Skida1 protein_coding protein_coding MGP_CBAJ_T0052361.1 MGP_CBAJ_G0025084.1 mouse_genomes_project 2 16832880 16833944 - MGP_CBAJ_P0052361 Skida1 protein_coding protein_coding MGP_CBAJ_T0052362.1 MGP_CBAJ_G0025084.1 mouse_genomes_project 2 16833308 16834191 - MGP_CBAJ_P0052362 Skida1 protein_coding protein_coding MGP_CBAJ_T0053266.1 MGP_CBAJ_G0025251.1 mouse_genomes_project 2 29346169 29542480 + MGP_CBAJ_P0053266 Med27 protein_coding protein_coding MGP_CBAJ_T0053267.1 MGP_CBAJ_G0025251.1 mouse_genomes_project 2 29346183 29496206 + MGP_CBAJ_P0053267 Med27 protein_coding protein_coding MGP_CBAJ_T0053268.1 MGP_CBAJ_G0025251.1 mouse_genomes_project 2 29382883 29518073 + MGP_CBAJ_P0053268 Med27 protein_coding protein_coding MGP_CBAJ_T0053269.1 MGP_CBAJ_G0025251.1 mouse_genomes_project 2 29382883 29527147 + MGP_CBAJ_P0053269 Med27 protein_coding protein_coding MGP_CBAJ_T0053270.1 MGP_CBAJ_G0025251.1 mouse_genomes_project 2 29383557 29517970 + MGP_CBAJ_P0053270 Med27 protein_coding protein_coding MGP_CBAJ_T0053271.1 MGP_CBAJ_G0025251.1 mouse_genomes_project 2 29383576 29542242 + MGP_CBAJ_P0053271 Med27 protein_coding protein_coding MGP_CBAJ_T0053272.1 MGP_CBAJ_G0025251.1 mouse_genomes_project 2 29383648 29495394 + MGP_CBAJ_P0053272 Med27 protein_coding protein_coding MGP_CBAJ_T0053273.1 MGP_CBAJ_G0025251.1 mouse_genomes_project 2 29399174 29540538 + Med27 protein_coding processed_transcript MGP_CBAJ_T0053274.1 MGP_CBAJ_G0025251.1 mouse_genomes_project 2 29514255 29518295 + Med27 protein_coding retained_intron MGP_CBAJ_T0053275.1 MGP_CBAJ_G0025251.1 mouse_genomes_project 2 29522573 29542368 + Med27 protein_coding processed_transcript MGP_CBAJ_T0056396.1 MGP_CBAJ_G0026006.1 mouse_genomes_project 2 128227198 128292379 - MGP_CBAJ_P0056396 Rasgrp1 protein_coding protein_coding MGP_CBAJ_T0056397.1 MGP_CBAJ_G0026006.1 mouse_genomes_project 2 128227199 128292255 - MGP_CBAJ_P0056397 Rasgrp1 protein_coding protein_coding MGP_CBAJ_T0056398.1 MGP_CBAJ_G0026006.1 mouse_genomes_project 2 128229749 128292087 - MGP_CBAJ_P0056398 Rasgrp1 protein_coding protein_coding MGP_CBAJ_T0056399.1 MGP_CBAJ_G0026006.1 mouse_genomes_project 2 128229749 128292087 - MGP_CBAJ_P0056399 Rasgrp1 protein_coding protein_coding MGP_CBAJ_T0056400.1 MGP_CBAJ_G0026006.1 mouse_genomes_project 2 128229749 128292087 - MGP_CBAJ_P0056400 Rasgrp1 protein_coding protein_coding MGP_CBAJ_T0056401.1 MGP_CBAJ_G0026006.1 mouse_genomes_project 2 128229749 128292087 - MGP_CBAJ_P0056401 Rasgrp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056402.1 MGP_CBAJ_G0026006.1 mouse_genomes_project 2 128245326 128292303 - Rasgrp1 protein_coding retained_intron MGP_CBAJ_T0003919.1 MGP_CBAJ_G0003492.1 mouse_genomes_project 2 73031851 73033521 + Gm13596 antisense antisense MGP_CBAJ_T0056062.1 MGP_CBAJ_G0025905.1 mouse_genomes_project 2 112975668 113018463 - MGP_CBAJ_P0056062 Nat10 protein_coding protein_coding MGP_CBAJ_T0056063.1 MGP_CBAJ_G0025905.1 mouse_genomes_project 2 112975672 113018434 - Nat10 protein_coding retained_intron MGP_CBAJ_T0056064.1 MGP_CBAJ_G0025905.1 mouse_genomes_project 2 112975672 113018434 - Nat10 protein_coding retained_intron MGP_CBAJ_T0056065.1 MGP_CBAJ_G0025905.1 mouse_genomes_project 2 112975672 113018390 - Nat10 protein_coding retained_intron MGP_CBAJ_T0056066.1 MGP_CBAJ_G0025905.1 mouse_genomes_project 2 112976073 112978842 - Nat10 protein_coding retained_intron MGP_CBAJ_T0056067.1 MGP_CBAJ_G0025905.1 mouse_genomes_project 2 112976339 113018397 - Nat10 protein_coding retained_intron MGP_CBAJ_T0056068.1 MGP_CBAJ_G0025905.1 mouse_genomes_project 2 112986220 112988892 - Nat10 protein_coding retained_intron MGP_CBAJ_T0056069.1 MGP_CBAJ_G0025905.1 mouse_genomes_project 2 112986415 112987658 - Nat10 protein_coding retained_intron MGP_CBAJ_T0056070.1 MGP_CBAJ_G0025905.1 mouse_genomes_project 2 112988737 112998552 - Nat10 protein_coding retained_intron MGP_CBAJ_T0056071.1 MGP_CBAJ_G0025905.1 mouse_genomes_project 2 112994751 113018463 - Nat10 protein_coding retained_intron MGP_CBAJ_T0056072.1 MGP_CBAJ_G0025905.1 mouse_genomes_project 2 113007418 113018119 - MGP_CBAJ_P0056072 Nat10 protein_coding protein_coding MGP_CBAJ_T0056073.1 MGP_CBAJ_G0025905.1 mouse_genomes_project 2 113010224 113018454 - Nat10 protein_coding retained_intron MGP_CBAJ_T0056074.1 MGP_CBAJ_G0025905.1 mouse_genomes_project 2 113014363 113018388 - Nat10 protein_coding retained_intron MGP_CBAJ_T0056075.1 MGP_CBAJ_G0025905.1 mouse_genomes_project 2 113014500 113015680 - MGP_CBAJ_P0056075 Nat10 protein_coding protein_coding MGP_CBAJ_T0058665.1 MGP_CBAJ_G0026512.1 mouse_genomes_project 2 179609286 179610108 - MGP_CBAJ_P0058665 Gtsf1l protein_coding protein_coding MGP_CBAJ_T0017524.1 MGP_CBAJ_G0015164.1 mouse_genomes_project 2 62947795 62951976 - 5330411J11Rik processed_transcript processed_transcript MGP_CBAJ_T0017525.1 MGP_CBAJ_G0015164.1 mouse_genomes_project 2 62949086 62955471 - 5330411J11Rik processed_transcript processed_transcript MGP_CBAJ_T0055534.1 MGP_CBAJ_G0025793.1 mouse_genomes_project 2 96845470 96846380 - MGP_CBAJ_P0055534 Olfr1233 protein_coding protein_coding MGP_CBAJ_T0053627.1 MGP_CBAJ_G0025301.1 mouse_genomes_project 2 32101780 32111672 + Abl1 protein_coding retained_intron MGP_CBAJ_T0053628.1 MGP_CBAJ_G0025301.1 mouse_genomes_project 2 32101941 32121500 + Abl1 protein_coding processed_transcript MGP_CBAJ_T0053629.1 MGP_CBAJ_G0025301.1 mouse_genomes_project 2 32101955 32252127 + MGP_CBAJ_P0053629 Abl1 protein_coding protein_coding MGP_CBAJ_T0053630.1 MGP_CBAJ_G0025301.1 mouse_genomes_project 2 32101956 32248925 + MGP_CBAJ_P0053630 Abl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053631.1 MGP_CBAJ_G0025301.1 mouse_genomes_project 2 32102869 32226040 + MGP_CBAJ_P0053631 Abl1 protein_coding protein_coding MGP_CBAJ_T0053632.1 MGP_CBAJ_G0025301.1 mouse_genomes_project 2 32103015 32226672 + MGP_CBAJ_P0053632 Abl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053633.1 MGP_CBAJ_G0025301.1 mouse_genomes_project 2 32207530 32252813 + MGP_CBAJ_P0053633 Abl1 protein_coding protein_coding MGP_CBAJ_T0053634.1 MGP_CBAJ_G0025301.1 mouse_genomes_project 2 32207760 32226672 + MGP_CBAJ_P0053634 Abl1 protein_coding protein_coding MGP_CBAJ_T0053635.1 MGP_CBAJ_G0025301.1 mouse_genomes_project 2 32238544 32242932 + Abl1 protein_coding retained_intron MGP_CBAJ_T0053636.1 MGP_CBAJ_G0025301.1 mouse_genomes_project 2 32245231 32246578 + Abl1 protein_coding retained_intron MGP_CBAJ_T0007220.1 MGP_CBAJ_G0005914.1 mouse_genomes_project 2 138771690 138805063 - Gm26697 lincRNA lincRNA MGP_CBAJ_T0054879.1 MGP_CBAJ_G0025531.1 mouse_genomes_project 2 76046663 76084226 + MGP_CBAJ_P0054879 Cybrd1 protein_coding protein_coding MGP_CBAJ_T0011379.1 MGP_CBAJ_G0009517.1 mouse_genomes_project 2 114600566 114600860 - Gm27538 misc_RNA misc_RNA MGP_CBAJ_T0055533.1 MGP_CBAJ_G0025792.1 mouse_genomes_project 2 96827835 96828771 - MGP_CBAJ_P0055533 Olfr1232 protein_coding protein_coding MGP_CBAJ_T0013472.1 MGP_CBAJ_G0011584.1 mouse_genomes_project 2 94552613 94553025 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099099.1 MGP_CBAJ_G0037354.1 mouse_genomes_project 2 35835073 35835177 + Gm24905 snRNA snRNA MGP_CBAJ_T0058425.1 MGP_CBAJ_G0026463.1 mouse_genomes_project 2 172566080 172582994 + MGP_CBAJ_P0058425 Tgif2 protein_coding protein_coding MGP_CBAJ_T0058426.1 MGP_CBAJ_G0026463.1 mouse_genomes_project 2 172567106 172575408 + MGP_CBAJ_P0058426 Tgif2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058427.1 MGP_CBAJ_G0026463.1 mouse_genomes_project 2 172577689 172580930 + Tgif2 protein_coding processed_transcript MGP_CBAJ_T0058428.1 MGP_CBAJ_G0026463.1 mouse_genomes_project 2 172578569 172581933 + Tgif2 protein_coding processed_transcript MGP_CBAJ_T0055346.1 MGP_CBAJ_G0025632.1 mouse_genomes_project 2 91566317 91570427 + Tnks1bp1 protein_coding processed_transcript MGP_CBAJ_T0055347.1 MGP_CBAJ_G0025632.1 mouse_genomes_project 2 91566350 91591335 + Tnks1bp1 protein_coding processed_transcript MGP_CBAJ_T0055348.1 MGP_CBAJ_G0025632.1 mouse_genomes_project 2 91566394 91582373 + MGP_CBAJ_P0055348 Tnks1bp1 protein_coding unknown_likely_coding MGP_CBAJ_T0055349.1 MGP_CBAJ_G0025632.1 mouse_genomes_project 2 91568754 91570345 + Tnks1bp1 protein_coding processed_transcript MGP_CBAJ_T0055350.1 MGP_CBAJ_G0025632.1 mouse_genomes_project 2 91568754 91591339 + MGP_CBAJ_P0055350 Tnks1bp1 protein_coding protein_coding MGP_CBAJ_T0055351.1 MGP_CBAJ_G0025632.1 mouse_genomes_project 2 91568902 91591329 + Tnks1bp1 protein_coding processed_transcript MGP_CBAJ_T0055352.1 MGP_CBAJ_G0025632.1 mouse_genomes_project 2 91569187 91576852 + Tnks1bp1 protein_coding processed_transcript MGP_CBAJ_T0055353.1 MGP_CBAJ_G0025632.1 mouse_genomes_project 2 91576453 91591339 + MGP_CBAJ_P0055353 Tnks1bp1 protein_coding protein_coding MGP_CBAJ_T0007271.1 MGP_CBAJ_G0005955.1 mouse_genomes_project 2 172559126 172565894 - Gm14230 lincRNA lincRNA MGP_CBAJ_T0007272.1 MGP_CBAJ_G0005955.1 mouse_genomes_project 2 172563895 172565966 - Gm14230 lincRNA lincRNA MGP_CBAJ_T0007273.1 MGP_CBAJ_G0005955.1 mouse_genomes_project 2 172564545 172565874 - Gm14230 lincRNA lincRNA MGP_CBAJ_T0013409.1 MGP_CBAJ_G0011521.1 mouse_genomes_project 2 74483061 74483494 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007161.1 MGP_CBAJ_G0005869.1 mouse_genomes_project 2 100808083 100827191 + Gm13816 lincRNA lincRNA MGP_CBAJ_T0057753.1 MGP_CBAJ_G0026300.1 mouse_genomes_project 2 161373553 161444840 + MGP_CBAJ_P0057753 Xrn2 protein_coding protein_coding MGP_CBAJ_T0057754.1 MGP_CBAJ_G0026300.1 mouse_genomes_project 2 161393599 161405323 + Xrn2 protein_coding retained_intron MGP_CBAJ_T0057755.1 MGP_CBAJ_G0026300.1 mouse_genomes_project 2 161409596 161414773 + Xrn2 protein_coding retained_intron MGP_CBAJ_T0057756.1 MGP_CBAJ_G0026300.1 mouse_genomes_project 2 161428362 161435826 + Xrn2 protein_coding retained_intron MGP_CBAJ_T0057901.1 MGP_CBAJ_G0026346.1 mouse_genomes_project 2 167067564 167083163 + MGP_CBAJ_P0057901 Scrt2 protein_coding protein_coding MGP_CBAJ_T0057872.1 MGP_CBAJ_G0026337.1 mouse_genomes_project 2 166490918 166508591 + MGP_CBAJ_P0057872 Sdcbp2 protein_coding protein_coding MGP_CBAJ_T0013382.1 MGP_CBAJ_G0011494.1 mouse_genomes_project 2 62968763 62969193 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101828.1 MGP_CBAJ_G0039859.1 mouse_genomes_project 2 141981817 141982943 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0101825.1 MGP_CBAJ_G0039856.1 mouse_genomes_project 2 130478876 130479117 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0057323.1 MGP_CBAJ_G0026211.1 mouse_genomes_project 2 143358685 143363914 - MGP_CBAJ_P0057323 Lzts3 protein_coding protein_coding MGP_CBAJ_T0057324.1 MGP_CBAJ_G0026211.1 mouse_genomes_project 2 143358685 143363914 - MGP_CBAJ_P0057324 Lzts3 protein_coding protein_coding MGP_CBAJ_T0057325.1 MGP_CBAJ_G0026211.1 mouse_genomes_project 2 143358688 143372193 - MGP_CBAJ_P0057325 Lzts3 protein_coding protein_coding MGP_CBAJ_T0055539.1 MGP_CBAJ_G0025796.1 mouse_genomes_project 2 96949176 96950094 - MGP_CBAJ_P0055539 Olfr1239 protein_coding protein_coding MGP_CBAJ_T0013570.1 MGP_CBAJ_G0011682.1 mouse_genomes_project 2 141080395 141080669 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0003902.1 MGP_CBAJ_G0003479.1 mouse_genomes_project 2 64039213 64072283 + Gm13571 antisense antisense MGP_CBAJ_T0003903.1 MGP_CBAJ_G0003479.1 mouse_genomes_project 2 64056359 64064908 + Gm13571 antisense antisense MGP_CBAJ_T0098026.1 MGP_CBAJ_G0036299.1 mouse_genomes_project 2 180769521 180769639 - n-R5s207 rRNA rRNA MGP_CBAJ_T0053903.1 MGP_CBAJ_G0025342.1 mouse_genomes_project 2 33681953 33786320 - MGP_CBAJ_P0053903 Garnl3 protein_coding protein_coding MGP_CBAJ_T0053904.1 MGP_CBAJ_G0025342.1 mouse_genomes_project 2 33682103 33785419 - MGP_CBAJ_P0053904 Garnl3 protein_coding protein_coding MGP_CBAJ_T0053905.1 MGP_CBAJ_G0025342.1 mouse_genomes_project 2 33682103 33833095 - MGP_CBAJ_P0053905 Garnl3 protein_coding protein_coding MGP_CBAJ_T0053906.1 MGP_CBAJ_G0025342.1 mouse_genomes_project 2 33700231 33703928 - Garnl3 protein_coding retained_intron MGP_CBAJ_T0053907.1 MGP_CBAJ_G0025342.1 mouse_genomes_project 2 33704527 33803342 - Garnl3 protein_coding processed_transcript MGP_CBAJ_T0053908.1 MGP_CBAJ_G0025342.1 mouse_genomes_project 2 33710700 33732782 - MGP_CBAJ_P0053908 Garnl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053909.1 MGP_CBAJ_G0025342.1 mouse_genomes_project 2 33714797 33725192 - Garnl3 protein_coding retained_intron MGP_CBAJ_T0053910.1 MGP_CBAJ_G0025342.1 mouse_genomes_project 2 33744618 33785867 - Garnl3 protein_coding processed_transcript MGP_CBAJ_T0053911.1 MGP_CBAJ_G0025342.1 mouse_genomes_project 2 33752183 33785608 - Garnl3 protein_coding processed_transcript MGP_CBAJ_T0053912.1 MGP_CBAJ_G0025342.1 mouse_genomes_project 2 33752188 33833309 - MGP_CBAJ_P0053912 Garnl3 protein_coding protein_coding MGP_CBAJ_T0053913.1 MGP_CBAJ_G0025342.1 mouse_genomes_project 2 33752190 33833313 - MGP_CBAJ_P0053913 Garnl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053914.1 MGP_CBAJ_G0025342.1 mouse_genomes_project 2 33752235 33832267 - MGP_CBAJ_P0053914 Garnl3 protein_coding protein_coding MGP_CBAJ_T0057145.1 MGP_CBAJ_G0026162.1 mouse_genomes_project 2 139969288 139981509 - MGP_CBAJ_P0057145 Zfp661 protein_coding protein_coding MGP_CBAJ_T0057146.1 MGP_CBAJ_G0026162.1 mouse_genomes_project 2 139970150 139979086 - MGP_CBAJ_P0057146 Zfp661 protein_coding protein_coding MGP_CBAJ_T0057147.1 MGP_CBAJ_G0026162.1 mouse_genomes_project 2 139970157 139979094 - MGP_CBAJ_P0057147 Zfp661 protein_coding protein_coding MGP_CBAJ_T0057148.1 MGP_CBAJ_G0026162.1 mouse_genomes_project 2 139971557 139975933 - MGP_CBAJ_P0057148 Zfp661 protein_coding protein_coding MGP_CBAJ_T0003936.1 MGP_CBAJ_G0003502.1 mouse_genomes_project 2 78601927 78610142 + Gm13709 antisense antisense MGP_CBAJ_T0100370.1 MGP_CBAJ_G0038625.1 mouse_genomes_project 2 66786142 66786278 - Gm22020 snoRNA snoRNA MGP_CBAJ_T0013676.1 MGP_CBAJ_G0011788.1 mouse_genomes_project 2 181405225 181405481 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0059105.1 MGP_CBAJ_G0026623.1 mouse_genomes_project 2 186177259 186314034 - MGP_CBAJ_P0059105 Atp9a protein_coding protein_coding MGP_CBAJ_T0059106.1 MGP_CBAJ_G0026623.1 mouse_genomes_project 2 186177259 186306457 - MGP_CBAJ_P0059106 Atp9a protein_coding protein_coding MGP_CBAJ_T0059107.1 MGP_CBAJ_G0026623.1 mouse_genomes_project 2 186177259 186314196 - MGP_CBAJ_P0059107 Atp9a protein_coding protein_coding MGP_CBAJ_T0059108.1 MGP_CBAJ_G0026623.1 mouse_genomes_project 2 186177259 186318040 - MGP_CBAJ_P0059108 Atp9a protein_coding protein_coding MGP_CBAJ_T0059109.1 MGP_CBAJ_G0026623.1 mouse_genomes_project 2 186177284 186314198 - MGP_CBAJ_P0059109 Atp9a protein_coding protein_coding MGP_CBAJ_T0059110.1 MGP_CBAJ_G0026623.1 mouse_genomes_project 2 186207672 186220836 - Atp9a protein_coding processed_transcript MGP_CBAJ_T0059111.1 MGP_CBAJ_G0026623.1 mouse_genomes_project 2 186217540 186314034 - Atp9a protein_coding retained_intron MGP_CBAJ_T0059112.1 MGP_CBAJ_G0026623.1 mouse_genomes_project 2 186252539 186318282 - MGP_CBAJ_P0059112 Atp9a protein_coding protein_coding MGP_CBAJ_T0059113.1 MGP_CBAJ_G0026623.1 mouse_genomes_project 2 186252547 186318316 - MGP_CBAJ_P0059113 Atp9a protein_coding protein_coding MGP_CBAJ_T0059114.1 MGP_CBAJ_G0026623.1 mouse_genomes_project 2 186266995 186278469 - MGP_CBAJ_P0059114 Atp9a protein_coding protein_coding MGP_CBAJ_T0059115.1 MGP_CBAJ_G0026623.1 mouse_genomes_project 2 186267062 186278518 - MGP_CBAJ_P0059115 Atp9a protein_coding protein_coding MGP_CBAJ_T0010352.1 MGP_CBAJ_G0008490.1 mouse_genomes_project 2 175147564 175147657 + Gm44319 miRNA miRNA MGP_CBAJ_T0054644.1 MGP_CBAJ_G0025486.1 mouse_genomes_project 2 66663238 67214765 - MGP_CBAJ_P0054644 Kcnh7 protein_coding protein_coding MGP_CBAJ_T0054645.1 MGP_CBAJ_G0025486.1 mouse_genomes_project 2 66767162 67214774 - MGP_CBAJ_P0054645 Kcnh7 protein_coding protein_coding MGP_CBAJ_T0054646.1 MGP_CBAJ_G0025486.1 mouse_genomes_project 2 66767248 67214657 - MGP_CBAJ_P0054646 Kcnh7 protein_coding protein_coding MGP_CBAJ_T0054647.1 MGP_CBAJ_G0025486.1 mouse_genomes_project 2 67211955 67214749 - Kcnh7 protein_coding processed_transcript MGP_CBAJ_T0004043.1 MGP_CBAJ_G0003573.1 mouse_genomes_project 2 160491148 160499029 + A930019D19Rik antisense antisense MGP_CBAJ_T0098016.1 MGP_CBAJ_G0036289.1 mouse_genomes_project 2 91182372 91182485 - n-R5s200 rRNA rRNA MGP_CBAJ_T0003979.1 MGP_CBAJ_G0003528.1 mouse_genomes_project 2 123882571 123939806 - Gm13963 antisense antisense MGP_CBAJ_T0056275.1 MGP_CBAJ_G0025957.1 mouse_genomes_project 2 121521804 121522527 + MGP_CBAJ_P0056275 protein_coding protein_coding MGP_CBAJ_T0101800.1 MGP_CBAJ_G0039831.1 mouse_genomes_project 2 93173494 93174490 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0055090.1 MGP_CBAJ_G0025582.1 mouse_genomes_project 2 82293024 82314555 + MGP_CBAJ_P0055090 Plekha3 protein_coding protein_coding MGP_CBAJ_T0055091.1 MGP_CBAJ_G0025582.1 mouse_genomes_project 2 82307571 82310491 + Plekha3 protein_coding processed_transcript MGP_CBAJ_T0013537.1 MGP_CBAJ_G0011649.1 mouse_genomes_project 2 120226974 120227959 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055386.1 MGP_CBAJ_G0025662.1 mouse_genomes_project 2 92699978 92701061 + MGP_CBAJ_P0055386 protein_coding protein_coding MGP_CBAJ_T0055370.1 MGP_CBAJ_G0025647.1 mouse_genomes_project 2 92378346 92379382 + MGP_CBAJ_P0055370 Olfr1014 protein_coding protein_coding MGP_CBAJ_T0055511.1 MGP_CBAJ_G0025774.1 mouse_genomes_project 2 96429862 96430798 + MGP_CBAJ_P0055511 Olfr1212 protein_coding protein_coding MGP_CBAJ_T0052683.1 MGP_CBAJ_G0025142.1 mouse_genomes_project 2 24681535 24682678 + MGP_CBAJ_P0052683 Rnf208 protein_coding protein_coding MGP_CBAJ_T0052684.1 MGP_CBAJ_G0025142.1 mouse_genomes_project 2 24682209 24683542 + MGP_CBAJ_P0052684 Rnf208 protein_coding protein_coding MGP_CBAJ_T0052685.1 MGP_CBAJ_G0025142.1 mouse_genomes_project 2 24682218 24683543 + MGP_CBAJ_P0052685 Rnf208 protein_coding protein_coding MGP_CBAJ_T0101807.1 MGP_CBAJ_G0039838.1 mouse_genomes_project 2 94561737 94562593 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0055520.1 MGP_CBAJ_G0025781.1 mouse_genomes_project 2 96594619 96595555 - MGP_CBAJ_P0055520 Olfr1220 protein_coding protein_coding MGP_CBAJ_T0013445.1 MGP_CBAJ_G0011557.1 mouse_genomes_project 2 86554647 86555332 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013510.1 MGP_CBAJ_G0011622.1 mouse_genomes_project 2 111286189 111289079 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003965.1 MGP_CBAJ_G0003522.1 mouse_genomes_project 2 111892357 111901210 - Gm13872 antisense antisense MGP_CBAJ_T0003966.1 MGP_CBAJ_G0003522.1 mouse_genomes_project 2 111898101 111901197 - Gm13872 antisense antisense MGP_CBAJ_T0003967.1 MGP_CBAJ_G0003522.1 mouse_genomes_project 2 111899088 111901211 - Gm13872 antisense antisense MGP_CBAJ_T0013279.1 MGP_CBAJ_G0011391.1 mouse_genomes_project 2 21823683 21824044 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010223.1 MGP_CBAJ_G0008361.1 mouse_genomes_project 2 8375320 8375419 + Mir297a-2 miRNA miRNA MGP_CBAJ_T0013685.1 MGP_CBAJ_G0011797.1 mouse_genomes_project 2 184871412 184871689 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010292.1 MGP_CBAJ_G0008430.1 mouse_genomes_project 2 69617675 69617780 - Mir6337 miRNA miRNA MGP_CBAJ_T0055896.1 MGP_CBAJ_G0025873.1 mouse_genomes_project 2 101319737 101465755 - MGP_CBAJ_P0055896 Tspan18 protein_coding protein_coding MGP_CBAJ_T0055897.1 MGP_CBAJ_G0025873.1 mouse_genomes_project 2 101322224 101348994 - MGP_CBAJ_P0055897 Tspan18 protein_coding protein_coding MGP_CBAJ_T0055898.1 MGP_CBAJ_G0025873.1 mouse_genomes_project 2 101442554 101465773 - Tspan18 protein_coding processed_transcript MGP_CBAJ_T0055899.1 MGP_CBAJ_G0025873.1 mouse_genomes_project 2 101442554 101443807 - Tspan18 protein_coding processed_transcript MGP_CBAJ_T0055462.1 MGP_CBAJ_G0025728.1 mouse_genomes_project 2 94769604 94770537 - MGP_CBAJ_P0055462 Olfr1136 protein_coding protein_coding MGP_CBAJ_T0057900.1 MGP_CBAJ_G0026345.1 mouse_genomes_project 2 166964095 166975746 + MGP_CBAJ_P0057900 Slc52a3 protein_coding protein_coding MGP_CBAJ_T0007268.1 MGP_CBAJ_G0005952.1 mouse_genomes_project 2 172112118 172115843 - Gm14224 lincRNA lincRNA MGP_CBAJ_T0058107.1 MGP_CBAJ_G0026411.1 mouse_genomes_project 2 169911933 169929557 - MGP_CBAJ_P0058107 Necab3 protein_coding protein_coding MGP_CBAJ_T0058108.1 MGP_CBAJ_G0026411.1 mouse_genomes_project 2 169911933 169929572 - MGP_CBAJ_P0058108 Necab3 protein_coding protein_coding MGP_CBAJ_T0058109.1 MGP_CBAJ_G0026411.1 mouse_genomes_project 2 169912579 169914329 - Necab3 protein_coding retained_intron MGP_CBAJ_T0058110.1 MGP_CBAJ_G0026411.1 mouse_genomes_project 2 169914580 169929596 - MGP_CBAJ_P0058110 Necab3 protein_coding protein_coding MGP_CBAJ_T0058112.1 MGP_CBAJ_G0026411.1 mouse_genomes_project 2 169914675 169929550 - Necab3 protein_coding processed_transcript MGP_CBAJ_T0058116.1 MGP_CBAJ_G0026411.1 mouse_genomes_project 2 169924996 169929558 - Necab3 protein_coding retained_intron MGP_CBAJ_T0058117.1 MGP_CBAJ_G0026411.1 mouse_genomes_project 2 169925374 169927985 - Necab3 protein_coding retained_intron MGP_CBAJ_T0052258.1 MGP_CBAJ_G0025064.1 mouse_genomes_project 2 11135462 11213430 + MGP_CBAJ_P0052258 Pter protein_coding protein_coding MGP_CBAJ_T0052259.1 MGP_CBAJ_G0025064.1 mouse_genomes_project 2 11135483 11190103 + Pter protein_coding processed_transcript MGP_CBAJ_T0052260.1 MGP_CBAJ_G0025064.1 mouse_genomes_project 2 11135490 11213431 + MGP_CBAJ_P0052260 Pter protein_coding protein_coding MGP_CBAJ_T0052261.1 MGP_CBAJ_G0025064.1 mouse_genomes_project 2 11135513 11218553 + MGP_CBAJ_P0052261 Pter protein_coding protein_coding MGP_CBAJ_T0052262.1 MGP_CBAJ_G0025064.1 mouse_genomes_project 2 11135521 11214064 + MGP_CBAJ_P0052262 Pter protein_coding protein_coding MGP_CBAJ_T0052263.1 MGP_CBAJ_G0025064.1 mouse_genomes_project 2 11135522 11191485 + Pter protein_coding processed_transcript MGP_CBAJ_T0052264.1 MGP_CBAJ_G0025064.1 mouse_genomes_project 2 11187512 11216957 + Pter protein_coding retained_intron MGP_CBAJ_T0013418.1 MGP_CBAJ_G0011530.1 mouse_genomes_project 2 77688692 77689034 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055882.1 MGP_CBAJ_G0025870.1 mouse_genomes_project 2 101003020 101052075 + MGP_CBAJ_P0055882 Syt13 protein_coding protein_coding MGP_CBAJ_T0100352.1 MGP_CBAJ_G0038607.1 mouse_genomes_project 2 32783690 32783775 + Gm25632 snoRNA snoRNA MGP_CBAJ_T0059611.1 MGP_CBAJ_G0026734.1 mouse_genomes_project 2 201120821 201127124 + MGP_CBAJ_P0059611 Gm14496 protein_coding protein_coding MGP_CBAJ_T0013355.1 MGP_CBAJ_G0011467.1 mouse_genomes_project 2 53916893 53917717 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0057219.1 MGP_CBAJ_G0026183.1 mouse_genomes_project 2 141700888 141705314 + MGP_CBAJ_P0057219 Chchd5 protein_coding protein_coding MGP_CBAJ_T0057220.1 MGP_CBAJ_G0026183.1 mouse_genomes_project 2 141700992 141705193 + Chchd5 protein_coding processed_transcript MGP_CBAJ_T0057221.1 MGP_CBAJ_G0026183.1 mouse_genomes_project 2 141701038 141704660 + Chchd5 protein_coding retained_intron MGP_CBAJ_T0058140.1 MGP_CBAJ_G0026421.1 mouse_genomes_project 2 170208849 170523469 + MGP_CBAJ_P0058140 a protein_coding protein_coding MGP_CBAJ_T0058148.1 MGP_CBAJ_G0026421.1 mouse_genomes_project 2 170425468 170521401 + a protein_coding processed_transcript MGP_CBAJ_T0058149.1 MGP_CBAJ_G0026421.1 mouse_genomes_project 2 170425507 170526753 + MGP_CBAJ_P0058149 a protein_coding protein_coding MGP_CBAJ_T0058150.1 MGP_CBAJ_G0026421.1 mouse_genomes_project 2 170501471 170526374 + MGP_CBAJ_P0058150 a protein_coding protein_coding MGP_CBAJ_T0058151.1 MGP_CBAJ_G0026421.1 mouse_genomes_project 2 170501530 170526754 + MGP_CBAJ_P0058151 a protein_coding protein_coding MGP_CBAJ_T0058152.1 MGP_CBAJ_G0026421.1 mouse_genomes_project 2 170523356 170526753 + a protein_coding retained_intron MGP_CBAJ_T0056057.1 MGP_CBAJ_G0025903.1 mouse_genomes_project 2 112702267 112734801 - MGP_CBAJ_P0056057 Cat protein_coding protein_coding MGP_CBAJ_T0056058.1 MGP_CBAJ_G0025903.1 mouse_genomes_project 2 112703012 112734766 - MGP_CBAJ_P0056058 Cat protein_coding protein_coding MGP_CBAJ_T0101820.1 MGP_CBAJ_G0039851.1 mouse_genomes_project 2 97965739 97966664 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013507.1 MGP_CBAJ_G0011619.1 mouse_genomes_project 2 109422626 109423973 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007133.1 MGP_CBAJ_G0005845.1 mouse_genomes_project 2 80064985 80066833 + Gm14396 lincRNA lincRNA MGP_CBAJ_T0007134.1 MGP_CBAJ_G0005845.1 mouse_genomes_project 2 80065066 80066833 + Gm14396 lincRNA lincRNA MGP_CBAJ_T0052734.1 MGP_CBAJ_G0025152.1 mouse_genomes_project 2 24801208 24805278 - Dpp7 protein_coding processed_transcript MGP_CBAJ_T0052735.1 MGP_CBAJ_G0025152.1 mouse_genomes_project 2 24801219 24805264 - Dpp7 protein_coding processed_transcript MGP_CBAJ_T0052736.1 MGP_CBAJ_G0025152.1 mouse_genomes_project 2 24801222 24801807 - Dpp7 protein_coding processed_transcript MGP_CBAJ_T0052737.1 MGP_CBAJ_G0025152.1 mouse_genomes_project 2 24801222 24805292 - MGP_CBAJ_P0052737 Dpp7 protein_coding protein_coding MGP_CBAJ_T0052738.1 MGP_CBAJ_G0025152.1 mouse_genomes_project 2 24802086 24804991 - Dpp7 protein_coding processed_transcript MGP_CBAJ_T0052739.1 MGP_CBAJ_G0025152.1 mouse_genomes_project 2 24802292 24805230 - Dpp7 protein_coding processed_transcript MGP_CBAJ_T0052740.1 MGP_CBAJ_G0025152.1 mouse_genomes_project 2 24803400 24805230 - Dpp7 protein_coding processed_transcript MGP_CBAJ_T0052741.1 MGP_CBAJ_G0025152.1 mouse_genomes_project 2 24803929 24805286 - Dpp7 protein_coding processed_transcript MGP_CBAJ_T0052742.1 MGP_CBAJ_G0025152.1 mouse_genomes_project 2 24804374 24805279 - Dpp7 protein_coding processed_transcript MGP_CBAJ_T0052743.1 MGP_CBAJ_G0025152.1 mouse_genomes_project 2 24804635 24805265 - Dpp7 protein_coding processed_transcript MGP_CBAJ_T0052440.1 MGP_CBAJ_G0025098.1 mouse_genomes_project 2 19948711 20075188 - MGP_CBAJ_P0052440 Arhgap21 protein_coding protein_coding MGP_CBAJ_T0052441.1 MGP_CBAJ_G0025098.1 mouse_genomes_project 2 19948711 20076348 - MGP_CBAJ_P0052441 Arhgap21 protein_coding protein_coding MGP_CBAJ_T0052442.1 MGP_CBAJ_G0025098.1 mouse_genomes_project 2 19948732 20075187 - MGP_CBAJ_P0052442 Arhgap21 protein_coding protein_coding MGP_CBAJ_T0052443.1 MGP_CBAJ_G0025098.1 mouse_genomes_project 2 19949386 20075993 - MGP_CBAJ_P0052443 Arhgap21 protein_coding protein_coding MGP_CBAJ_T0052444.1 MGP_CBAJ_G0025098.1 mouse_genomes_project 2 19950744 19954040 - Arhgap21 protein_coding retained_intron MGP_CBAJ_T0052445.1 MGP_CBAJ_G0025098.1 mouse_genomes_project 2 19950835 19985273 - MGP_CBAJ_P0052445 Arhgap21 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052446.1 MGP_CBAJ_G0025098.1 mouse_genomes_project 2 19951036 19960681 - Arhgap21 protein_coding retained_intron MGP_CBAJ_T0052447.1 MGP_CBAJ_G0025098.1 mouse_genomes_project 2 19951172 19955424 - Arhgap21 protein_coding retained_intron MGP_CBAJ_T0052448.1 MGP_CBAJ_G0025098.1 mouse_genomes_project 2 19953833 19956498 - Arhgap21 protein_coding processed_transcript MGP_CBAJ_T0052449.1 MGP_CBAJ_G0025098.1 mouse_genomes_project 2 19953834 19960674 - Arhgap21 protein_coding processed_transcript MGP_CBAJ_T0052450.1 MGP_CBAJ_G0025098.1 mouse_genomes_project 2 19959707 19972157 - MGP_CBAJ_P0052450 Arhgap21 protein_coding protein_coding MGP_CBAJ_T0052451.1 MGP_CBAJ_G0025098.1 mouse_genomes_project 2 19960221 19961895 - Arhgap21 protein_coding retained_intron MGP_CBAJ_T0052452.1 MGP_CBAJ_G0025098.1 mouse_genomes_project 2 19988401 20018184 - Arhgap21 protein_coding processed_transcript MGP_CBAJ_T0052453.1 MGP_CBAJ_G0025098.1 mouse_genomes_project 2 19991943 20050861 - MGP_CBAJ_P0052453 Arhgap21 protein_coding protein_coding MGP_CBAJ_T0052454.1 MGP_CBAJ_G0025098.1 mouse_genomes_project 2 20018289 20076092 - MGP_CBAJ_P0052454 Arhgap21 protein_coding protein_coding MGP_CBAJ_T0052455.1 MGP_CBAJ_G0025098.1 mouse_genomes_project 2 20075064 20075951 - Arhgap21 protein_coding processed_transcript MGP_CBAJ_T0052456.1 MGP_CBAJ_G0025098.1 mouse_genomes_project 2 20075089 20076299 - Arhgap21 protein_coding processed_transcript MGP_CBAJ_T0052457.1 MGP_CBAJ_G0025098.1 mouse_genomes_project 2 20075156 20076347 - Arhgap21 protein_coding processed_transcript MGP_CBAJ_T0017577.1 MGP_CBAJ_G0015198.1 mouse_genomes_project 2 124553573 124618570 + A530058N18Rik processed_transcript antisense MGP_CBAJ_T0017578.1 MGP_CBAJ_G0015198.1 mouse_genomes_project 2 124553577 124612394 + A530058N18Rik processed_transcript processed_transcript MGP_CBAJ_T0052828.1 MGP_CBAJ_G0025165.1 mouse_genomes_project 2 24993623 25023366 - MGP_CBAJ_P0052828 Traf2 protein_coding protein_coding MGP_CBAJ_T0052829.1 MGP_CBAJ_G0025165.1 mouse_genomes_project 2 24994507 25014957 - Traf2 protein_coding retained_intron MGP_CBAJ_T0052830.1 MGP_CBAJ_G0025165.1 mouse_genomes_project 2 24994507 25023336 - MGP_CBAJ_P0052830 Traf2 protein_coding protein_coding MGP_CBAJ_T0056762.1 MGP_CBAJ_G0026079.1 mouse_genomes_project 2 132582002 132592338 - MGP_CBAJ_P0056762 Zscan29 protein_coding protein_coding MGP_CBAJ_T0056763.1 MGP_CBAJ_G0026079.1 mouse_genomes_project 2 132582002 132591337 - MGP_CBAJ_P0056763 Zscan29 protein_coding protein_coding MGP_CBAJ_T0056764.1 MGP_CBAJ_G0026079.1 mouse_genomes_project 2 132582788 132585727 - Zscan29 protein_coding retained_intron MGP_CBAJ_T0004015.1 MGP_CBAJ_G0003555.1 mouse_genomes_project 2 144545340 144622649 - Gm14280 antisense antisense MGP_CBAJ_T0057980.1 MGP_CBAJ_G0026379.1 mouse_genomes_project 2 168103529 168153233 + MGP_CBAJ_P0057980 Ttll9 protein_coding protein_coding MGP_CBAJ_T0057981.1 MGP_CBAJ_G0026379.1 mouse_genomes_project 2 168103550 168149067 + MGP_CBAJ_P0057981 Ttll9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057982.1 MGP_CBAJ_G0026379.1 mouse_genomes_project 2 168103550 168149074 + MGP_CBAJ_P0057982 Ttll9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057983.1 MGP_CBAJ_G0026379.1 mouse_genomes_project 2 168103550 168149118 + MGP_CBAJ_P0057983 Ttll9 protein_coding protein_coding MGP_CBAJ_T0057984.1 MGP_CBAJ_G0026379.1 mouse_genomes_project 2 168103555 168152864 + MGP_CBAJ_P0057984 Ttll9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057985.1 MGP_CBAJ_G0026379.1 mouse_genomes_project 2 168116249 168153233 + MGP_CBAJ_P0057985 Ttll9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057986.1 MGP_CBAJ_G0026379.1 mouse_genomes_project 2 168117527 168128331 + MGP_CBAJ_P0057986 Ttll9 protein_coding protein_coding MGP_CBAJ_T0057987.1 MGP_CBAJ_G0026379.1 mouse_genomes_project 2 168133490 168144991 + Ttll9 protein_coding retained_intron MGP_CBAJ_T0057988.1 MGP_CBAJ_G0026379.1 mouse_genomes_project 2 168148676 168154450 + Ttll9 protein_coding retained_intron MGP_CBAJ_T0100383.1 MGP_CBAJ_G0038638.1 mouse_genomes_project 2 113554479 113554606 - Gm22501 snoRNA snoRNA MGP_CBAJ_T0052859.1 MGP_CBAJ_G0025172.1 mouse_genomes_project 2 25110592 25112531 - MGP_CBAJ_P0052859 Tmem141 protein_coding protein_coding MGP_CBAJ_T0052860.1 MGP_CBAJ_G0025172.1 mouse_genomes_project 2 25110592 25112511 - MGP_CBAJ_P0052860 Tmem141 protein_coding protein_coding MGP_CBAJ_T0052861.1 MGP_CBAJ_G0025172.1 mouse_genomes_project 2 25110629 25112489 - Tmem141 protein_coding processed_transcript MGP_CBAJ_T0052862.1 MGP_CBAJ_G0025172.1 mouse_genomes_project 2 25110852 25112306 - Tmem141 protein_coding processed_transcript MGP_CBAJ_T0052863.1 MGP_CBAJ_G0025172.1 mouse_genomes_project 2 25111572 25112497 - Tmem141 protein_coding processed_transcript MGP_CBAJ_T0052864.1 MGP_CBAJ_G0025172.1 mouse_genomes_project 2 25111572 25112494 - Tmem141 protein_coding processed_transcript MGP_CBAJ_T0052865.1 MGP_CBAJ_G0025172.1 mouse_genomes_project 2 25112019 25112433 - Tmem141 protein_coding processed_transcript MGP_CBAJ_T0013541.1 MGP_CBAJ_G0011653.1 mouse_genomes_project 2 121976722 121976878 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013630.1 MGP_CBAJ_G0011742.1 mouse_genomes_project 2 164004915 164005634 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013514.1 MGP_CBAJ_G0011626.1 mouse_genomes_project 2 112800133 112800563 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013265.1 MGP_CBAJ_G0011377.1 mouse_genomes_project 2 17178993 17179404 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0058512.1 MGP_CBAJ_G0026479.1 mouse_genomes_project 2 173635220 173796547 + MGP_CBAJ_P0058512 Ctnnbl1 protein_coding protein_coding MGP_CBAJ_T0058513.1 MGP_CBAJ_G0026479.1 mouse_genomes_project 2 173693332 173711703 + Ctnnbl1 protein_coding processed_transcript MGP_CBAJ_T0058514.1 MGP_CBAJ_G0026479.1 mouse_genomes_project 2 173694748 173722808 + Ctnnbl1 protein_coding processed_transcript MGP_CBAJ_T0058515.1 MGP_CBAJ_G0026479.1 mouse_genomes_project 2 173694781 173741295 + Ctnnbl1 protein_coding processed_transcript MGP_CBAJ_T0010285.1 MGP_CBAJ_G0008423.1 mouse_genomes_project 2 40118958 40119034 + Mir181a-2 miRNA miRNA MGP_CBAJ_T0007109.1 MGP_CBAJ_G0005824.1 mouse_genomes_project 2 63790285 63791009 + Gm13620 lincRNA lincRNA MGP_CBAJ_T0007330.1 MGP_CBAJ_G0006005.1 mouse_genomes_project 2 193372456 193385513 - Gm14618 lincRNA lincRNA MGP_CBAJ_T0052517.1 MGP_CBAJ_G0025110.1 mouse_genomes_project 2 22382870 22491819 + MGP_CBAJ_P0052517 4931423N10Rik protein_coding protein_coding MGP_CBAJ_T0052518.1 MGP_CBAJ_G0025110.1 mouse_genomes_project 2 22382891 22489322 + MGP_CBAJ_P0052518 4931423N10Rik protein_coding protein_coding MGP_CBAJ_T0055457.1 MGP_CBAJ_G0025724.1 mouse_genomes_project 2 94706515 94707442 - MGP_CBAJ_P0055457 Olfr1132 protein_coding protein_coding MGP_CBAJ_T0003882.1 MGP_CBAJ_G0003464.1 mouse_genomes_project 2 34592548 34600324 + Nron antisense antisense MGP_CBAJ_T0003883.1 MGP_CBAJ_G0003464.1 mouse_genomes_project 2 34592560 34599188 + Nron antisense antisense MGP_CBAJ_T0003884.1 MGP_CBAJ_G0003464.1 mouse_genomes_project 2 34592591 34598171 + Nron antisense antisense MGP_CBAJ_T0056461.1 MGP_CBAJ_G0026021.1 mouse_genomes_project 2 130001799 130025651 + MGP_CBAJ_P0056461 Ivd protein_coding protein_coding MGP_CBAJ_T0056462.1 MGP_CBAJ_G0026021.1 mouse_genomes_project 2 130001873 130009756 + Ivd protein_coding retained_intron MGP_CBAJ_T0056463.1 MGP_CBAJ_G0026021.1 mouse_genomes_project 2 130010736 130011641 + Ivd protein_coding processed_transcript MGP_CBAJ_T0056464.1 MGP_CBAJ_G0026021.1 mouse_genomes_project 2 130011666 130016335 + Ivd protein_coding processed_transcript MGP_CBAJ_T0056465.1 MGP_CBAJ_G0026021.1 mouse_genomes_project 2 130012146 130014142 + Ivd protein_coding retained_intron MGP_CBAJ_T0056466.1 MGP_CBAJ_G0026021.1 mouse_genomes_project 2 130013687 130023344 + Ivd protein_coding processed_transcript MGP_CBAJ_T0056467.1 MGP_CBAJ_G0026021.1 mouse_genomes_project 2 130015079 130023779 + Ivd protein_coding processed_transcript MGP_CBAJ_T0056468.1 MGP_CBAJ_G0026021.1 mouse_genomes_project 2 130015808 130017266 + Ivd protein_coding processed_transcript MGP_CBAJ_T0013549.1 MGP_CBAJ_G0011661.1 mouse_genomes_project 2 125317265 125318047 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0056845.1 MGP_CBAJ_G0026088.1 mouse_genomes_project 2 132880784 132886035 - MGP_CBAJ_P0056845 Ell3 protein_coding protein_coding MGP_CBAJ_T0056846.1 MGP_CBAJ_G0026088.1 mouse_genomes_project 2 132880801 132884377 - MGP_CBAJ_P0056846 Ell3 protein_coding protein_coding MGP_CBAJ_T0056848.1 MGP_CBAJ_G0026088.1 mouse_genomes_project 2 132881754 132882927 - Ell3 protein_coding retained_intron MGP_CBAJ_T0055753.1 MGP_CBAJ_G0025849.1 mouse_genomes_project 2 99345693 99369854 + Lrp4 protein_coding processed_transcript MGP_CBAJ_T0055754.1 MGP_CBAJ_G0025849.1 mouse_genomes_project 2 99345693 99414152 + MGP_CBAJ_P0055754 Lrp4 protein_coding protein_coding MGP_CBAJ_T0055755.1 MGP_CBAJ_G0025849.1 mouse_genomes_project 2 99366822 99371438 + Lrp4 protein_coding processed_transcript MGP_CBAJ_T0055756.1 MGP_CBAJ_G0025849.1 mouse_genomes_project 2 99366885 99369409 + Lrp4 protein_coding processed_transcript MGP_CBAJ_T0057156.1 MGP_CBAJ_G0026164.1 mouse_genomes_project 2 140033063 140056521 - MGP_CBAJ_P0057156 Mal protein_coding protein_coding MGP_CBAJ_T0057157.1 MGP_CBAJ_G0026164.1 mouse_genomes_project 2 140034711 140056045 - MGP_CBAJ_P0057157 Mal protein_coding protein_coding MGP_CBAJ_T0003886.1 MGP_CBAJ_G0003466.1 mouse_genomes_project 2 35918252 35937758 + Gm13449 antisense antisense MGP_CBAJ_T0052878.1 MGP_CBAJ_G0025178.1 mouse_genomes_project 2 25204658 25208488 + MGP_CBAJ_P0052878 Obp2a protein_coding protein_coding MGP_CBAJ_T0058469.1 MGP_CBAJ_G0026472.1 mouse_genomes_project 2 173024201 173117350 - MGP_CBAJ_P0058469 Mroh8 protein_coding protein_coding MGP_CBAJ_T0058470.1 MGP_CBAJ_G0026472.1 mouse_genomes_project 2 173041264 173042678 - Mroh8 protein_coding processed_transcript MGP_CBAJ_T0058471.1 MGP_CBAJ_G0026472.1 mouse_genomes_project 2 173078276 173117090 - Mroh8 protein_coding processed_transcript MGP_CBAJ_T0058472.1 MGP_CBAJ_G0026472.1 mouse_genomes_project 2 173092482 173094889 - Mroh8 protein_coding processed_transcript MGP_CBAJ_T0058473.1 MGP_CBAJ_G0026472.1 mouse_genomes_project 2 173101942 173117350 - Mroh8 protein_coding processed_transcript MGP_CBAJ_T0057589.1 MGP_CBAJ_G0026263.1 mouse_genomes_project 2 153100495 153262959 + MGP_CBAJ_P0057589 Sptlc3 protein_coding protein_coding MGP_CBAJ_T0057590.1 MGP_CBAJ_G0026263.1 mouse_genomes_project 2 153100502 153263577 + MGP_CBAJ_P0057590 Sptlc3 protein_coding protein_coding MGP_CBAJ_T0100389.1 MGP_CBAJ_G0038644.1 mouse_genomes_project 2 132405504 132405718 + Gm22865 snoRNA snoRNA MGP_CBAJ_T0056164.1 MGP_CBAJ_G0025926.1 mouse_genomes_project 2 114723626 114895848 + MGP_CBAJ_P0056164 Them7 protein_coding protein_coding MGP_CBAJ_T0056165.1 MGP_CBAJ_G0025926.1 mouse_genomes_project 2 114723648 114895088 + Them7 protein_coding processed_transcript MGP_CBAJ_T0056287.1 MGP_CBAJ_G0025969.1 mouse_genomes_project 2 122064800 122065748 + MGP_CBAJ_P0056287 Olfr1302 protein_coding protein_coding MGP_CBAJ_T0013593.1 MGP_CBAJ_G0011705.1 mouse_genomes_project 2 149766146 149766788 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0054552.1 MGP_CBAJ_G0025471.1 mouse_genomes_project 2 63896367 63935627 + MGP_CBAJ_P0054552 March7 protein_coding protein_coding MGP_CBAJ_T0054553.1 MGP_CBAJ_G0025471.1 mouse_genomes_project 2 63896393 63937092 + March7 protein_coding processed_transcript MGP_CBAJ_T0054554.1 MGP_CBAJ_G0025471.1 mouse_genomes_project 2 63896553 63934389 + MGP_CBAJ_P0054554 March7 protein_coding protein_coding MGP_CBAJ_T0054555.1 MGP_CBAJ_G0025471.1 mouse_genomes_project 2 63911176 63934373 + MGP_CBAJ_P0054555 March7 protein_coding protein_coding MGP_CBAJ_T0054556.1 MGP_CBAJ_G0025471.1 mouse_genomes_project 2 63918509 63920801 + March7 protein_coding processed_transcript MGP_CBAJ_T0054557.1 MGP_CBAJ_G0025471.1 mouse_genomes_project 2 63923170 63934373 + MGP_CBAJ_P0054557 March7 protein_coding protein_coding MGP_CBAJ_T0054558.1 MGP_CBAJ_G0025471.1 mouse_genomes_project 2 63923304 63929551 + March7 protein_coding processed_transcript MGP_CBAJ_T0054559.1 MGP_CBAJ_G0025471.1 mouse_genomes_project 2 63929485 63934371 + March7 protein_coding processed_transcript MGP_CBAJ_T0054560.1 MGP_CBAJ_G0025471.1 mouse_genomes_project 2 63933758 63934373 + March7 protein_coding processed_transcript MGP_CBAJ_T0011359.1 MGP_CBAJ_G0009497.1 mouse_genomes_project 2 6107492 6107783 - Gm24534 misc_RNA misc_RNA MGP_CBAJ_T0004029.1 MGP_CBAJ_G0003563.1 mouse_genomes_project 2 149483140 149489806 + antisense antisense MGP_CBAJ_T0010274.1 MGP_CBAJ_G0008412.1 mouse_genomes_project 2 32902396 32902475 + Gm23363 miRNA miRNA MGP_CBAJ_T0007083.1 MGP_CBAJ_G0005803.1 mouse_genomes_project 2 37280910 37281636 + Gm13431 lincRNA lincRNA MGP_CBAJ_T0007084.1 MGP_CBAJ_G0005803.1 mouse_genomes_project 2 37280958 37287068 + Gm13431 lincRNA lincRNA MGP_CBAJ_T0007085.1 MGP_CBAJ_G0005803.1 mouse_genomes_project 2 37284624 37287000 + Gm13431 lincRNA lincRNA MGP_CBAJ_T0053979.1 MGP_CBAJ_G0025353.1 mouse_genomes_project 2 35682955 35704985 - MGP_CBAJ_P0053979 Rabepk protein_coding protein_coding MGP_CBAJ_T0053980.1 MGP_CBAJ_G0025353.1 mouse_genomes_project 2 35684285 35704835 - MGP_CBAJ_P0053980 Rabepk protein_coding protein_coding MGP_CBAJ_T0053981.1 MGP_CBAJ_G0025353.1 mouse_genomes_project 2 35684496 35700520 - MGP_CBAJ_P0053981 Rabepk protein_coding nonsense_mediated_decay MGP_CBAJ_T0053982.1 MGP_CBAJ_G0025353.1 mouse_genomes_project 2 35689896 35705081 - MGP_CBAJ_P0053982 Rabepk protein_coding nonsense_mediated_decay MGP_CBAJ_T0053983.1 MGP_CBAJ_G0025353.1 mouse_genomes_project 2 35690288 35705118 - MGP_CBAJ_P0053983 Rabepk protein_coding nonsense_mediated_decay MGP_CBAJ_T0053984.1 MGP_CBAJ_G0025353.1 mouse_genomes_project 2 35690760 35704971 - Rabepk protein_coding retained_intron MGP_CBAJ_T0098194.1 MGP_CBAJ_G0036467.1 mouse_genomes_project 2 54218327 54218457 - Gm23505 scaRNA scaRNA MGP_CBAJ_T0059166.1 MGP_CBAJ_G0026641.1 mouse_genomes_project 2 190648658 190656941 - MGP_CBAJ_P0059166 Gcnt7 protein_coding protein_coding MGP_CBAJ_T0059167.1 MGP_CBAJ_G0026641.1 mouse_genomes_project 2 190648659 190653085 - MGP_CBAJ_P0059167 Gcnt7 protein_coding protein_coding MGP_CBAJ_T0055473.1 MGP_CBAJ_G0025738.1 mouse_genomes_project 2 94984033 94984966 + MGP_CBAJ_P0055473 Olfr1152 protein_coding protein_coding MGP_CBAJ_T0099091.1 MGP_CBAJ_G0037346.1 mouse_genomes_project 2 24404324 24404431 - Gm25518 snRNA snRNA MGP_CBAJ_T0054486.1 MGP_CBAJ_G0025463.1 mouse_genomes_project 2 62099849 62175039 + Upp2 protein_coding processed_transcript MGP_CBAJ_T0054487.1 MGP_CBAJ_G0025463.1 mouse_genomes_project 2 62099869 62119689 + Upp2 protein_coding processed_transcript MGP_CBAJ_T0054488.1 MGP_CBAJ_G0025463.1 mouse_genomes_project 2 62099938 62351520 + MGP_CBAJ_P0054488 Upp2 protein_coding protein_coding MGP_CBAJ_T0054489.1 MGP_CBAJ_G0025463.1 mouse_genomes_project 2 62309003 62349791 + MGP_CBAJ_P0054489 Upp2 protein_coding protein_coding MGP_CBAJ_T0054490.1 MGP_CBAJ_G0025463.1 mouse_genomes_project 2 62309241 62349217 + MGP_CBAJ_P0054490 Upp2 protein_coding protein_coding MGP_CBAJ_T0054491.1 MGP_CBAJ_G0025463.1 mouse_genomes_project 2 62323883 62348851 + Upp2 protein_coding processed_transcript MGP_CBAJ_T0055011.1 MGP_CBAJ_G0025555.1 mouse_genomes_project 2 79218182 79221062 - MGP_CBAJ_P0055011 Atp5g3 protein_coding protein_coding MGP_CBAJ_T0055012.1 MGP_CBAJ_G0025555.1 mouse_genomes_project 2 79218182 79221061 - MGP_CBAJ_P0055012 Atp5g3 protein_coding protein_coding MGP_CBAJ_T0055013.1 MGP_CBAJ_G0025555.1 mouse_genomes_project 2 79218466 79221018 - Atp5g3 protein_coding processed_transcript MGP_CBAJ_T0055014.1 MGP_CBAJ_G0025555.1 mouse_genomes_project 2 79218918 79220195 - Atp5g3 protein_coding processed_transcript MGP_CBAJ_T0055015.1 MGP_CBAJ_G0025555.1 mouse_genomes_project 2 79219053 79221027 - Atp5g3 protein_coding processed_transcript MGP_CBAJ_T0052810.1 MGP_CBAJ_G0025162.1 mouse_genomes_project 2 24959475 24962542 - MGP_CBAJ_P0052810 Lcn12 protein_coding protein_coding MGP_CBAJ_T0052811.1 MGP_CBAJ_G0025162.1 mouse_genomes_project 2 24959477 24962063 - MGP_CBAJ_P0052811 Lcn12 protein_coding protein_coding MGP_CBAJ_T0058549.1 MGP_CBAJ_G0026488.1 mouse_genomes_project 2 174392165 174485738 + MGP_CBAJ_P0058549 Ralgapb protein_coding protein_coding MGP_CBAJ_T0058550.1 MGP_CBAJ_G0026488.1 mouse_genomes_project 2 174392170 174485738 + MGP_CBAJ_P0058550 Ralgapb protein_coding protein_coding MGP_CBAJ_T0058551.1 MGP_CBAJ_G0026488.1 mouse_genomes_project 2 174392193 174412702 + Ralgapb protein_coding retained_intron MGP_CBAJ_T0058552.1 MGP_CBAJ_G0026488.1 mouse_genomes_project 2 174392196 174424220 + Ralgapb protein_coding retained_intron MGP_CBAJ_T0058553.1 MGP_CBAJ_G0026488.1 mouse_genomes_project 2 174392199 174427870 + Ralgapb protein_coding processed_transcript MGP_CBAJ_T0058554.1 MGP_CBAJ_G0026488.1 mouse_genomes_project 2 174392268 174484145 + MGP_CBAJ_P0058554 Ralgapb protein_coding protein_coding MGP_CBAJ_T0058555.1 MGP_CBAJ_G0026488.1 mouse_genomes_project 2 174392419 174405546 + MGP_CBAJ_P0058555 Ralgapb protein_coding protein_coding MGP_CBAJ_T0058556.1 MGP_CBAJ_G0026488.1 mouse_genomes_project 2 174421127 174485738 + MGP_CBAJ_P0058556 Ralgapb protein_coding protein_coding MGP_CBAJ_T0058557.1 MGP_CBAJ_G0026488.1 mouse_genomes_project 2 174451883 174460895 + Ralgapb protein_coding retained_intron MGP_CBAJ_T0058558.1 MGP_CBAJ_G0026488.1 mouse_genomes_project 2 174465202 174472180 + Ralgapb protein_coding processed_transcript MGP_CBAJ_T0013392.1 MGP_CBAJ_G0011504.1 mouse_genomes_project 2 65854734 65855053 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001024.1 MGP_CBAJ_G0000956.1 mouse_genomes_project 2 24246848 24248646 - TEC TEC MGP_CBAJ_T0017564.1 MGP_CBAJ_G0015192.1 mouse_genomes_project 2 113061156 113067533 - 4930547E08Rik processed_transcript processed_transcript MGP_CBAJ_T0098302.1 MGP_CBAJ_G0036569.1 mouse_genomes_project 2 1167670 1171020 + Gm10862 sense_intronic sense_intronic MGP_CBAJ_T0010212.1 MGP_CBAJ_G0008350.1 mouse_genomes_project 2 8370029 8370113 + Mir466m miRNA miRNA MGP_CBAJ_T0017672.1 MGP_CBAJ_G0015241.1 mouse_genomes_project 2 198809122 198811278 + 4921531C22Rik processed_transcript processed_transcript MGP_CBAJ_T0017673.1 MGP_CBAJ_G0015241.1 mouse_genomes_project 2 198809714 198810252 + 4921531C22Rik processed_transcript processed_transcript MGP_CBAJ_T0057942.1 MGP_CBAJ_G0026365.1 mouse_genomes_project 2 167641904 167646109 - MGP_CBAJ_P0057942 Defb19 protein_coding protein_coding MGP_CBAJ_T0013558.1 MGP_CBAJ_G0011670.1 mouse_genomes_project 2 132452462 132453230 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101091.1 MGP_CBAJ_G0039300.1 mouse_genomes_project 2 176143382 176143830 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0052848.1 MGP_CBAJ_G0025170.1 mouse_genomes_project 2 25065110 25093283 - MGP_CBAJ_P0052848 Rabl6 protein_coding protein_coding MGP_CBAJ_T0052849.1 MGP_CBAJ_G0025170.1 mouse_genomes_project 2 25066203 25072455 - Rabl6 protein_coding processed_transcript MGP_CBAJ_T0052850.1 MGP_CBAJ_G0025170.1 mouse_genomes_project 2 25066203 25093227 - Rabl6 protein_coding processed_transcript MGP_CBAJ_T0052851.1 MGP_CBAJ_G0025170.1 mouse_genomes_project 2 25066227 25067153 - Rabl6 protein_coding processed_transcript MGP_CBAJ_T0052852.1 MGP_CBAJ_G0025170.1 mouse_genomes_project 2 25067281 25067916 - Rabl6 protein_coding processed_transcript MGP_CBAJ_T0052853.1 MGP_CBAJ_G0025170.1 mouse_genomes_project 2 25067766 25069390 - Rabl6 protein_coding processed_transcript MGP_CBAJ_T0052854.1 MGP_CBAJ_G0025170.1 mouse_genomes_project 2 25069527 25071242 - Rabl6 protein_coding processed_transcript MGP_CBAJ_T0052855.1 MGP_CBAJ_G0025170.1 mouse_genomes_project 2 25069609 25093247 - Rabl6 protein_coding processed_transcript MGP_CBAJ_T0052856.1 MGP_CBAJ_G0025170.1 mouse_genomes_project 2 25081305 25093218 - Rabl6 protein_coding processed_transcript MGP_CBAJ_T0010213.1 MGP_CBAJ_G0008351.1 mouse_genomes_project 2 8370310 8370404 + Mir466f-1 miRNA miRNA MGP_CBAJ_T0057831.1 MGP_CBAJ_G0026331.1 mouse_genomes_project 2 165672731 165682809 - Abhd12 protein_coding processed_transcript MGP_CBAJ_T0057832.1 MGP_CBAJ_G0026331.1 mouse_genomes_project 2 165672731 165750693 - MGP_CBAJ_P0057832 Abhd12 protein_coding protein_coding MGP_CBAJ_T0057833.1 MGP_CBAJ_G0026331.1 mouse_genomes_project 2 165672755 165750683 - MGP_CBAJ_P0057833 Abhd12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057834.1 MGP_CBAJ_G0026331.1 mouse_genomes_project 2 165673354 165679961 - MGP_CBAJ_P0057834 Abhd12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057835.1 MGP_CBAJ_G0026331.1 mouse_genomes_project 2 165677597 165750614 - Abhd12 protein_coding processed_transcript MGP_CBAJ_T0057836.1 MGP_CBAJ_G0026331.1 mouse_genomes_project 2 165683271 165691729 - Abhd12 protein_coding retained_intron MGP_CBAJ_T0057837.1 MGP_CBAJ_G0026331.1 mouse_genomes_project 2 165686568 165750599 - MGP_CBAJ_P0057837 Abhd12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056445.1 MGP_CBAJ_G0026018.1 mouse_genomes_project 2 129909988 129915223 + MGP_CBAJ_P0056445 Phgr1 protein_coding protein_coding MGP_CBAJ_T0056446.1 MGP_CBAJ_G0026018.1 mouse_genomes_project 2 129909988 129915224 + MGP_CBAJ_P0056446 Phgr1 protein_coding protein_coding MGP_CBAJ_T0055627.1 MGP_CBAJ_G0025834.1 mouse_genomes_project 2 98675451 98688429 - MGP_CBAJ_P0055627 Ndufs3 protein_coding unknown_likely_coding MGP_CBAJ_T0055628.1 MGP_CBAJ_G0025834.1 mouse_genomes_project 2 98675456 98679264 - Ndufs3 protein_coding processed_transcript MGP_CBAJ_T0055629.1 MGP_CBAJ_G0025834.1 mouse_genomes_project 2 98675458 98688582 - MGP_CBAJ_P0055629 Ndufs3 protein_coding protein_coding MGP_CBAJ_T0055630.1 MGP_CBAJ_G0025834.1 mouse_genomes_project 2 98675460 98686441 - Ndufs3 protein_coding processed_transcript MGP_CBAJ_T0055631.1 MGP_CBAJ_G0025834.1 mouse_genomes_project 2 98679105 98688397 - Ndufs3 protein_coding processed_transcript MGP_CBAJ_T0055632.1 MGP_CBAJ_G0025834.1 mouse_genomes_project 2 98687579 98688457 - Ndufs3 protein_coding processed_transcript MGP_CBAJ_T0098196.1 MGP_CBAJ_G0036469.1 mouse_genomes_project 2 116508303 116508427 + Gm22813 scaRNA scaRNA MGP_CBAJ_T0058795.1 MGP_CBAJ_G0026559.1 mouse_genomes_project 2 181420576 181421899 + MGP_CBAJ_P0058795 Wfdc10 protein_coding protein_coding MGP_CBAJ_T0013331.1 MGP_CBAJ_G0011443.1 mouse_genomes_project 2 41030772 41030892 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099146.1 MGP_CBAJ_G0037401.1 mouse_genomes_project 2 200454911 200455014 - Gm22708 snRNA snRNA MGP_CBAJ_T0100338.1 MGP_CBAJ_G0038593.1 mouse_genomes_project 2 7932075 7932203 - Gm23608 snoRNA snoRNA MGP_CBAJ_T0055784.1 MGP_CBAJ_G0025854.1 mouse_genomes_project 2 99581074 99605297 - MGP_CBAJ_P0055784 Atg13 protein_coding unknown_likely_coding MGP_CBAJ_T0055785.1 MGP_CBAJ_G0025854.1 mouse_genomes_project 2 99581077 99623039 - MGP_CBAJ_P0055785 Atg13 protein_coding protein_coding MGP_CBAJ_T0055786.1 MGP_CBAJ_G0025854.1 mouse_genomes_project 2 99581078 99622982 - MGP_CBAJ_P0055786 Atg13 protein_coding protein_coding MGP_CBAJ_T0055787.1 MGP_CBAJ_G0025854.1 mouse_genomes_project 2 99582742 99586155 - Atg13 protein_coding processed_transcript MGP_CBAJ_T0055788.1 MGP_CBAJ_G0025854.1 mouse_genomes_project 2 99582777 99588683 - Atg13 protein_coding processed_transcript MGP_CBAJ_T0055789.1 MGP_CBAJ_G0025854.1 mouse_genomes_project 2 99585847 99591706 - Atg13 protein_coding processed_transcript MGP_CBAJ_T0055790.1 MGP_CBAJ_G0025854.1 mouse_genomes_project 2 99595166 99616462 - Atg13 protein_coding processed_transcript MGP_CBAJ_T0058875.1 MGP_CBAJ_G0026580.1 mouse_genomes_project 2 181831566 181865999 - MGP_CBAJ_P0058875 Ncoa5 protein_coding protein_coding MGP_CBAJ_T0058876.1 MGP_CBAJ_G0026580.1 mouse_genomes_project 2 181831569 181865949 - MGP_CBAJ_P0058876 Ncoa5 protein_coding protein_coding MGP_CBAJ_T0058877.1 MGP_CBAJ_G0026580.1 mouse_genomes_project 2 181831572 181865920 - MGP_CBAJ_P0058877 Ncoa5 protein_coding protein_coding MGP_CBAJ_T0058878.1 MGP_CBAJ_G0026580.1 mouse_genomes_project 2 181833883 181835866 - Ncoa5 protein_coding retained_intron MGP_CBAJ_T0058879.1 MGP_CBAJ_G0026580.1 mouse_genomes_project 2 181841328 181865935 - Ncoa5 protein_coding retained_intron MGP_CBAJ_T0058880.1 MGP_CBAJ_G0026580.1 mouse_genomes_project 2 181844361 181865961 - MGP_CBAJ_P0058880 Ncoa5 protein_coding protein_coding MGP_CBAJ_T0058881.1 MGP_CBAJ_G0026580.1 mouse_genomes_project 2 181854029 181854571 - Ncoa5 protein_coding processed_transcript MGP_CBAJ_T0058882.1 MGP_CBAJ_G0026580.1 mouse_genomes_project 2 181854299 181865919 - Ncoa5 protein_coding retained_intron MGP_CBAJ_T0007193.1 MGP_CBAJ_G0005894.1 mouse_genomes_project 2 125844094 125846331 + Gm28493 lincRNA lincRNA MGP_CBAJ_T0003914.1 MGP_CBAJ_G0003488.1 mouse_genomes_project 2 70504491 70509423 + Gm13618 antisense antisense MGP_CBAJ_T0013497.1 MGP_CBAJ_G0011609.1 mouse_genomes_project 2 104520566 104520726 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003977.1 MGP_CBAJ_G0003527.1 mouse_genomes_project 2 120049260 120068311 - Ccdc34os antisense antisense MGP_CBAJ_T0003978.1 MGP_CBAJ_G0003527.1 mouse_genomes_project 2 120049261 120068314 - Ccdc34os antisense antisense MGP_CBAJ_T0013297.1 MGP_CBAJ_G0011409.1 mouse_genomes_project 2 28730408 28730532 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0058793.1 MGP_CBAJ_G0026558.1 mouse_genomes_project 2 181414156 181421114 - MGP_CBAJ_P0058793 Wfdc9 protein_coding protein_coding MGP_CBAJ_T0058794.1 MGP_CBAJ_G0026558.1 mouse_genomes_project 2 181414312 181416289 - MGP_CBAJ_P0058794 Wfdc9 protein_coding protein_coding MGP_CBAJ_T0057955.1 MGP_CBAJ_G0026371.1 mouse_genomes_project 2 167780130 167781066 + MGP_CBAJ_P0057955 Mcts2 protein_coding protein_coding MGP_CBAJ_T0053283.1 MGP_CBAJ_G0025254.1 mouse_genomes_project 2 29825191 29858517 - MGP_CBAJ_P0053283 Trub2 protein_coding protein_coding MGP_CBAJ_T0053286.1 MGP_CBAJ_G0025254.1 mouse_genomes_project 2 29840544 29858529 - MGP_CBAJ_P0053286 Trub2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053287.1 MGP_CBAJ_G0025254.1 mouse_genomes_project 2 29841970 29859371 - MGP_CBAJ_P0053287 Trub2 protein_coding protein_coding MGP_CBAJ_T0053288.1 MGP_CBAJ_G0025254.1 mouse_genomes_project 2 29846113 29858503 - MGP_CBAJ_P0053288 Trub2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053289.1 MGP_CBAJ_G0025254.1 mouse_genomes_project 2 29846182 29858491 - MGP_CBAJ_P0053289 Trub2 protein_coding protein_coding MGP_CBAJ_T0053290.1 MGP_CBAJ_G0025254.1 mouse_genomes_project 2 29847019 29858540 - MGP_CBAJ_P0053290 Trub2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053291.1 MGP_CBAJ_G0025254.1 mouse_genomes_project 2 29847178 29853213 - Trub2 protein_coding retained_intron MGP_CBAJ_T0053292.1 MGP_CBAJ_G0025254.1 mouse_genomes_project 2 29850294 29853067 - Trub2 protein_coding retained_intron MGP_CBAJ_T0053293.1 MGP_CBAJ_G0025254.1 mouse_genomes_project 2 29854089 29858499 - Trub2 protein_coding retained_intron MGP_CBAJ_T0053294.1 MGP_CBAJ_G0025254.1 mouse_genomes_project 2 29855790 29858502 - Trub2 protein_coding retained_intron MGP_CBAJ_T0054755.1 MGP_CBAJ_G0025507.1 mouse_genomes_project 2 73815299 73830058 - MGP_CBAJ_P0054755 Spc25 protein_coding protein_coding MGP_CBAJ_T0054756.1 MGP_CBAJ_G0025507.1 mouse_genomes_project 2 73815825 73829750 - MGP_CBAJ_P0054756 Spc25 protein_coding protein_coding MGP_CBAJ_T0054757.1 MGP_CBAJ_G0025507.1 mouse_genomes_project 2 73818545 73829049 - MGP_CBAJ_P0054757 Spc25 protein_coding protein_coding MGP_CBAJ_T0054758.1 MGP_CBAJ_G0025507.1 mouse_genomes_project 2 73818588 73830081 - MGP_CBAJ_P0054758 Spc25 protein_coding protein_coding MGP_CBAJ_T0054759.1 MGP_CBAJ_G0025507.1 mouse_genomes_project 2 73822305 73830024 - Spc25 protein_coding processed_transcript MGP_CBAJ_T0054760.1 MGP_CBAJ_G0025507.1 mouse_genomes_project 2 73823580 73829134 - Spc25 protein_coding processed_transcript MGP_CBAJ_T0054761.1 MGP_CBAJ_G0025507.1 mouse_genomes_project 2 73829538 73830080 - Spc25 protein_coding processed_transcript MGP_CBAJ_T0057123.1 MGP_CBAJ_G0026156.1 mouse_genomes_project 2 139707197 139726178 + MGP_CBAJ_P0057123 Astl protein_coding protein_coding MGP_CBAJ_T0057124.1 MGP_CBAJ_G0026156.1 mouse_genomes_project 2 139710186 139726177 + MGP_CBAJ_P0057124 Astl protein_coding protein_coding MGP_CBAJ_T0057125.1 MGP_CBAJ_G0026156.1 mouse_genomes_project 2 139710200 139726176 + MGP_CBAJ_P0057125 Astl protein_coding protein_coding MGP_CBAJ_T0057126.1 MGP_CBAJ_G0026156.1 mouse_genomes_project 2 139710474 139718697 + MGP_CBAJ_P0057126 Astl protein_coding protein_coding MGP_CBAJ_T0058736.1 MGP_CBAJ_G0026535.1 mouse_genomes_project 2 180832650 180839990 - MGP_CBAJ_P0058736 Wfdc15b protein_coding protein_coding MGP_CBAJ_T0058737.1 MGP_CBAJ_G0026535.1 mouse_genomes_project 2 180832650 180839961 - MGP_CBAJ_P0058737 Wfdc15b protein_coding protein_coding MGP_CBAJ_T0058738.1 MGP_CBAJ_G0026535.1 mouse_genomes_project 2 180832651 180833780 - MGP_CBAJ_P0058738 Wfdc15b protein_coding protein_coding MGP_CBAJ_T0099123.1 MGP_CBAJ_G0037378.1 mouse_genomes_project 2 129139535 129139693 - Gm25308 snRNA snRNA MGP_CBAJ_T0055220.1 MGP_CBAJ_G0025602.1 mouse_genomes_project 2 88246936 88494238 + MGP_CBAJ_P0055220 Zfp804a protein_coding protein_coding MGP_CBAJ_T0055221.1 MGP_CBAJ_G0025602.1 mouse_genomes_project 2 88463639 88491245 + Zfp804a protein_coding processed_transcript MGP_CBAJ_T0057606.1 MGP_CBAJ_G0026269.1 mouse_genomes_project 2 153929151 154098886 - MGP_CBAJ_P0057606 Sel1l2 protein_coding protein_coding MGP_CBAJ_T0057607.1 MGP_CBAJ_G0026269.1 mouse_genomes_project 2 154001829 154004810 - Sel1l2 protein_coding processed_transcript MGP_CBAJ_T0057608.1 MGP_CBAJ_G0026269.1 mouse_genomes_project 2 154001834 154098888 - MGP_CBAJ_P0057608 Sel1l2 protein_coding protein_coding MGP_CBAJ_T0007206.1 MGP_CBAJ_G0005902.1 mouse_genomes_project 2 128379187 128382537 - Gm13982 lincRNA lincRNA MGP_CBAJ_T0010283.1 MGP_CBAJ_G0008421.1 mouse_genomes_project 2 39417161 39417243 - Gm44455 miRNA miRNA MGP_CBAJ_T0013453.1 MGP_CBAJ_G0011565.1 mouse_genomes_project 2 88919104 88919444 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0056527.1 MGP_CBAJ_G0026039.1 mouse_genomes_project 2 130574920 130697903 - MGP_CBAJ_P0056527 Ino80 protein_coding protein_coding MGP_CBAJ_T0056528.1 MGP_CBAJ_G0026039.1 mouse_genomes_project 2 130604754 130697829 - MGP_CBAJ_P0056528 Ino80 protein_coding protein_coding MGP_CBAJ_T0056529.1 MGP_CBAJ_G0026039.1 mouse_genomes_project 2 130635480 130641875 - Ino80 protein_coding retained_intron MGP_CBAJ_T0013550.1 MGP_CBAJ_G0011662.1 mouse_genomes_project 2 125733445 125734339 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0054383.1 MGP_CBAJ_G0025440.1 mouse_genomes_project 2 54372638 54373536 + MGP_CBAJ_P0054383 Tas2r134 protein_coding protein_coding MGP_CBAJ_T0055493.1 MGP_CBAJ_G0025757.1 mouse_genomes_project 2 95702968 95703898 - MGP_CBAJ_P0055493 Olfr1180 protein_coding protein_coding MGP_CBAJ_T0013449.1 MGP_CBAJ_G0011561.1 mouse_genomes_project 2 86964448 86965063 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0056285.1 MGP_CBAJ_G0025967.1 mouse_genomes_project 2 121929202 121930454 + MGP_CBAJ_P0056285 protein_coding protein_coding MGP_CBAJ_T0058383.1 MGP_CBAJ_G0026457.1 mouse_genomes_project 2 171947742 171948600 - MGP_CBAJ_P0058383 Scand1 protein_coding protein_coding MGP_CBAJ_T0054673.1 MGP_CBAJ_G0025490.1 mouse_genomes_project 2 69567912 69616843 - MGP_CBAJ_P0054673 Slc38a11 protein_coding protein_coding MGP_CBAJ_T0054674.1 MGP_CBAJ_G0025490.1 mouse_genomes_project 2 69567967 69617299 - MGP_CBAJ_P0054674 Slc38a11 protein_coding protein_coding MGP_CBAJ_T0054675.1 MGP_CBAJ_G0025490.1 mouse_genomes_project 2 69574325 69617414 - MGP_CBAJ_P0054675 Slc38a11 protein_coding protein_coding MGP_CBAJ_T0054676.1 MGP_CBAJ_G0025490.1 mouse_genomes_project 2 69602856 69617414 - Slc38a11 protein_coding processed_transcript MGP_CBAJ_T0054677.1 MGP_CBAJ_G0025490.1 mouse_genomes_project 2 69603420 69617380 - MGP_CBAJ_P0054677 Slc38a11 protein_coding protein_coding MGP_CBAJ_T0054678.1 MGP_CBAJ_G0025490.1 mouse_genomes_project 2 69606269 69617303 - Slc38a11 protein_coding processed_transcript MGP_CBAJ_T0054679.1 MGP_CBAJ_G0025490.1 mouse_genomes_project 2 69608178 69617410 - Slc38a11 protein_coding processed_transcript MGP_CBAJ_T0055410.1 MGP_CBAJ_G0025685.1 mouse_genomes_project 2 93488626 93489559 - MGP_CBAJ_P0055410 Olfr1086 protein_coding protein_coding MGP_CBAJ_T0007222.1 MGP_CBAJ_G0005916.1 mouse_genomes_project 2 140705225 140707203 - Gm14012 lincRNA lincRNA MGP_CBAJ_T0054283.1 MGP_CBAJ_G0025428.1 mouse_genomes_project 2 45750098 46453451 + MGP_CBAJ_P0054283 Arhgap15 protein_coding protein_coding MGP_CBAJ_T0054284.1 MGP_CBAJ_G0025428.1 mouse_genomes_project 2 45750108 46442872 + MGP_CBAJ_P0054284 Arhgap15 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054285.1 MGP_CBAJ_G0025428.1 mouse_genomes_project 2 45750143 45899704 + Arhgap15 protein_coding processed_transcript MGP_CBAJ_T0054286.1 MGP_CBAJ_G0025428.1 mouse_genomes_project 2 45750144 46442876 + MGP_CBAJ_P0054286 Arhgap15 protein_coding protein_coding MGP_CBAJ_T0054287.1 MGP_CBAJ_G0025428.1 mouse_genomes_project 2 46098049 46183613 + Arhgap15 protein_coding processed_transcript MGP_CBAJ_T0013388.1 MGP_CBAJ_G0011500.1 mouse_genomes_project 2 64320891 64321138 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0003942.1 MGP_CBAJ_G0003506.1 mouse_genomes_project 2 78920822 78922816 + Chn1os1 antisense antisense MGP_CBAJ_T0013224.1 MGP_CBAJ_G0011336.1 mouse_genomes_project 2 18420 18936 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055527.1 MGP_CBAJ_G0025787.1 mouse_genomes_project 2 96721140 96722073 - MGP_CBAJ_P0055527 Olfr1226 protein_coding protein_coding MGP_CBAJ_T0007138.1 MGP_CBAJ_G0005848.1 mouse_genomes_project 2 80134662 80135305 + Gm14426 lincRNA lincRNA MGP_CBAJ_T0013531.1 MGP_CBAJ_G0011643.1 mouse_genomes_project 2 116732759 116734396 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007219.1 MGP_CBAJ_G0005913.1 mouse_genomes_project 2 137371743 137373033 - Gm14003 lincRNA lincRNA MGP_CBAJ_T0013654.1 MGP_CBAJ_G0011766.1 mouse_genomes_project 2 171990216 171991236 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010350.1 MGP_CBAJ_G0008488.1 mouse_genomes_project 2 174649129 174649187 + Mir3474 miRNA miRNA MGP_CBAJ_T0007326.1 MGP_CBAJ_G0006001.1 mouse_genomes_project 2 190102521 190103522 - Gm14272 lincRNA lincRNA MGP_CBAJ_T0059336.1 MGP_CBAJ_G0026686.1 mouse_genomes_project 2 199237233 199246798 - MGP_CBAJ_P0059336 Gata5 protein_coding protein_coding MGP_CBAJ_T0055068.1 MGP_CBAJ_G0025575.1 mouse_genomes_project 2 81544129 81561070 - MGP_CBAJ_P0055068 Pde11a protein_coding protein_coding MGP_CBAJ_T0055069.1 MGP_CBAJ_G0025575.1 mouse_genomes_project 2 81544905 81931603 - MGP_CBAJ_P0055069 Pde11a protein_coding protein_coding MGP_CBAJ_T0055070.1 MGP_CBAJ_G0025575.1 mouse_genomes_project 2 81591352 81813659 - MGP_CBAJ_P0055070 Pde11a protein_coding protein_coding MGP_CBAJ_T0017599.1 MGP_CBAJ_G0015207.1 mouse_genomes_project 2 134471242 134489077 + 4930417H01Rik processed_transcript processed_transcript MGP_CBAJ_T0017600.1 MGP_CBAJ_G0015207.1 mouse_genomes_project 2 134472102 134491553 + 4930417H01Rik processed_transcript processed_transcript MGP_CBAJ_T0017601.1 MGP_CBAJ_G0015207.1 mouse_genomes_project 2 134472104 134489077 + 4930417H01Rik processed_transcript processed_transcript MGP_CBAJ_T0017602.1 MGP_CBAJ_G0015207.1 mouse_genomes_project 2 134473445 134491554 + 4930417H01Rik processed_transcript processed_transcript MGP_CBAJ_T0017603.1 MGP_CBAJ_G0015207.1 mouse_genomes_project 2 134473447 134489188 + 4930417H01Rik processed_transcript processed_transcript MGP_CBAJ_T0017604.1 MGP_CBAJ_G0015207.1 mouse_genomes_project 2 134477252 134492413 + 4930417H01Rik processed_transcript processed_transcript MGP_CBAJ_T0052078.1 MGP_CBAJ_G0025040.1 mouse_genomes_project 2 3317422 3445934 + MGP_CBAJ_P0052078 Upf2 protein_coding protein_coding MGP_CBAJ_T0052079.1 MGP_CBAJ_G0025040.1 mouse_genomes_project 2 3401035 3445929 + MGP_CBAJ_P0052079 Upf2 protein_coding protein_coding MGP_CBAJ_T0052080.1 MGP_CBAJ_G0025040.1 mouse_genomes_project 2 3435419 3444733 + Upf2 protein_coding processed_transcript MGP_CBAJ_T0004062.1 MGP_CBAJ_G0003590.1 mouse_genomes_project 2 171131221 171132132 - Gm14257 antisense antisense MGP_CBAJ_T0013365.1 MGP_CBAJ_G0011477.1 mouse_genomes_project 2 57343370 57344187 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0058734.1 MGP_CBAJ_G0026533.1 mouse_genomes_project 2 180801584 180803000 - MGP_CBAJ_P0058734 Wfdc12 protein_coding protein_coding MGP_CBAJ_T0013481.1 MGP_CBAJ_G0011593.1 mouse_genomes_project 2 98829070 98829415 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0054427.1 MGP_CBAJ_G0025448.1 mouse_genomes_project 2 55613636 55667679 - MGP_CBAJ_P0054427 Stam2 protein_coding protein_coding MGP_CBAJ_T0054428.1 MGP_CBAJ_G0025448.1 mouse_genomes_project 2 55621954 55667760 - MGP_CBAJ_P0054428 Stam2 protein_coding protein_coding MGP_CBAJ_T0054429.1 MGP_CBAJ_G0025448.1 mouse_genomes_project 2 55631851 55667659 - Stam2 protein_coding retained_intron MGP_CBAJ_T0054430.1 MGP_CBAJ_G0025448.1 mouse_genomes_project 2 55632133 55667669 - MGP_CBAJ_P0054430 Stam2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054431.1 MGP_CBAJ_G0025448.1 mouse_genomes_project 2 55642944 55667635 - MGP_CBAJ_P0054431 Stam2 protein_coding protein_coding MGP_CBAJ_T0058666.1 MGP_CBAJ_G0026513.1 mouse_genomes_project 2 179752370 179878188 + MGP_CBAJ_P0058666 Tox2 protein_coding protein_coding MGP_CBAJ_T0058667.1 MGP_CBAJ_G0026513.1 mouse_genomes_project 2 179753798 179828070 + MGP_CBAJ_P0058667 Tox2 protein_coding protein_coding MGP_CBAJ_T0058668.1 MGP_CBAJ_G0026513.1 mouse_genomes_project 2 179777493 179877246 + MGP_CBAJ_P0058668 Tox2 protein_coding protein_coding MGP_CBAJ_T0058669.1 MGP_CBAJ_G0026513.1 mouse_genomes_project 2 179777584 179877046 + MGP_CBAJ_P0058669 Tox2 protein_coding protein_coding MGP_CBAJ_T0058670.1 MGP_CBAJ_G0026513.1 mouse_genomes_project 2 179874321 179877046 + MGP_CBAJ_P0058670 Tox2 protein_coding protein_coding MGP_CBAJ_T0057938.1 MGP_CBAJ_G0026361.1 mouse_genomes_project 2 167574776 167577969 + MGP_CBAJ_P0057938 Defb28 protein_coding protein_coding MGP_CBAJ_T0055479.1 MGP_CBAJ_G0025744.1 mouse_genomes_project 2 95088479 95089436 - MGP_CBAJ_P0055479 Olfr74 protein_coding protein_coding MGP_CBAJ_T0007127.1 MGP_CBAJ_G0005839.1 mouse_genomes_project 2 78694667 78712563 + Gm13708 lincRNA lincRNA MGP_CBAJ_T0003911.1 MGP_CBAJ_G0003485.1 mouse_genomes_project 2 69786404 69789729 + Gm13595 antisense antisense MGP_CBAJ_T0013621.1 MGP_CBAJ_G0011733.1 mouse_genomes_project 2 161511569 161512370 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0058402.1 MGP_CBAJ_G0026460.1 mouse_genomes_project 2 172218412 172240497 + MGP_CBAJ_P0058402 Aar2 protein_coding protein_coding MGP_CBAJ_T0058403.1 MGP_CBAJ_G0026460.1 mouse_genomes_project 2 172218424 172241314 + MGP_CBAJ_P0058403 Aar2 protein_coding protein_coding MGP_CBAJ_T0058404.1 MGP_CBAJ_G0026460.1 mouse_genomes_project 2 172218436 172221529 + Aar2 protein_coding processed_transcript MGP_CBAJ_T0058405.1 MGP_CBAJ_G0026460.1 mouse_genomes_project 2 172218438 172221910 + MGP_CBAJ_P0058405 Aar2 protein_coding protein_coding MGP_CBAJ_T0058406.1 MGP_CBAJ_G0026460.1 mouse_genomes_project 2 172218452 172221663 + MGP_CBAJ_P0058406 Aar2 protein_coding protein_coding MGP_CBAJ_T0101794.1 MGP_CBAJ_G0039825.1 mouse_genomes_project 2 92248019 92248745 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0059064.1 MGP_CBAJ_G0026613.1 mouse_genomes_project 2 185075099 185076603 + MGP_CBAJ_P0059064 Cebpb protein_coding protein_coding MGP_CBAJ_T0053554.1 MGP_CBAJ_G0025291.1 mouse_genomes_project 2 31290845 31303767 - MGP_CBAJ_P0053554 BC005624 protein_coding protein_coding MGP_CBAJ_T0053555.1 MGP_CBAJ_G0025291.1 mouse_genomes_project 2 31294626 31302332 - BC005624 protein_coding retained_intron MGP_CBAJ_T0053556.1 MGP_CBAJ_G0025291.1 mouse_genomes_project 2 31302728 31304027 - BC005624 protein_coding retained_intron MGP_CBAJ_T0056012.1 MGP_CBAJ_G0025896.1 mouse_genomes_project 2 111707634 111792981 + MGP_CBAJ_P0056012 Pamr1 protein_coding protein_coding MGP_CBAJ_T0056013.1 MGP_CBAJ_G0025896.1 mouse_genomes_project 2 111707771 111785626 + Pamr1 protein_coding retained_intron MGP_CBAJ_T0056014.1 MGP_CBAJ_G0025896.1 mouse_genomes_project 2 111786002 111790720 + Pamr1 protein_coding retained_intron MGP_CBAJ_T0056681.1 MGP_CBAJ_G0026065.1 mouse_genomes_project 2 131922549 131959588 + MGP_CBAJ_P0056681 Snap23 protein_coding protein_coding MGP_CBAJ_T0056682.1 MGP_CBAJ_G0026065.1 mouse_genomes_project 2 131922569 131959588 + MGP_CBAJ_P0056682 Snap23 protein_coding protein_coding MGP_CBAJ_T0056683.1 MGP_CBAJ_G0026065.1 mouse_genomes_project 2 131922575 131959588 + MGP_CBAJ_P0056683 Snap23 protein_coding protein_coding MGP_CBAJ_T0056684.1 MGP_CBAJ_G0026065.1 mouse_genomes_project 2 131922599 131955099 + MGP_CBAJ_P0056684 Snap23 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056685.1 MGP_CBAJ_G0026065.1 mouse_genomes_project 2 131922601 131942284 + Snap23 protein_coding retained_intron MGP_CBAJ_T0056686.1 MGP_CBAJ_G0026065.1 mouse_genomes_project 2 131922601 131943605 + MGP_CBAJ_P0056686 Snap23 protein_coding protein_coding MGP_CBAJ_T0056687.1 MGP_CBAJ_G0026065.1 mouse_genomes_project 2 131922616 131955012 + MGP_CBAJ_P0056687 Snap23 protein_coding protein_coding MGP_CBAJ_T0056688.1 MGP_CBAJ_G0026065.1 mouse_genomes_project 2 131943578 131953731 + Snap23 protein_coding retained_intron MGP_CBAJ_T0056689.1 MGP_CBAJ_G0026065.1 mouse_genomes_project 2 131948841 131955094 + Snap23 protein_coding processed_transcript MGP_CBAJ_T0058802.1 MGP_CBAJ_G0026564.1 mouse_genomes_project 2 181513566 181528318 - MGP_CBAJ_P0058802 Wfdc3 protein_coding protein_coding MGP_CBAJ_T0058803.1 MGP_CBAJ_G0026564.1 mouse_genomes_project 2 181513566 181525699 - MGP_CBAJ_P0058803 Wfdc3 protein_coding protein_coding MGP_CBAJ_T0058804.1 MGP_CBAJ_G0026564.1 mouse_genomes_project 2 181525951 181528318 - Wfdc3 protein_coding processed_transcript MGP_CBAJ_T0010217.1 MGP_CBAJ_G0008355.1 mouse_genomes_project 2 8371435 8371539 + Gm23578 miRNA miRNA MGP_CBAJ_T0003819.1 MGP_CBAJ_G0003414.1 mouse_genomes_project 2 3866159 3870407 - Gm13388 antisense antisense MGP_CBAJ_T0058921.1 MGP_CBAJ_G0026586.1 mouse_genomes_project 2 182244902 182269016 - MGP_CBAJ_P0058921 Zfp663 protein_coding protein_coding MGP_CBAJ_T0058922.1 MGP_CBAJ_G0026586.1 mouse_genomes_project 2 182244903 182257595 - MGP_CBAJ_P0058922 Zfp663 protein_coding protein_coding MGP_CBAJ_T0058923.1 MGP_CBAJ_G0026586.1 mouse_genomes_project 2 182247416 182256860 - Zfp663 protein_coding processed_transcript MGP_CBAJ_T0058924.1 MGP_CBAJ_G0026586.1 mouse_genomes_project 2 182247649 182269010 - MGP_CBAJ_P0058924 Zfp663 protein_coding protein_coding MGP_CBAJ_T0013441.1 MGP_CBAJ_G0011553.1 mouse_genomes_project 2 84840500 84840702 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0059129.1 MGP_CBAJ_G0026627.1 mouse_genomes_project 2 187406457 187728654 + MGP_CBAJ_P0059129 Tshz2 protein_coding protein_coding MGP_CBAJ_T0059130.1 MGP_CBAJ_G0026627.1 mouse_genomes_project 2 187407114 187696943 + MGP_CBAJ_P0059130 Tshz2 protein_coding protein_coding MGP_CBAJ_T0059131.1 MGP_CBAJ_G0026627.1 mouse_genomes_project 2 187693331 187909284 + MGP_CBAJ_P0059131 Tshz2 protein_coding protein_coding MGP_CBAJ_T0059132.1 MGP_CBAJ_G0026627.1 mouse_genomes_project 2 187693331 187909284 + MGP_CBAJ_P0059132 Tshz2 protein_coding protein_coding MGP_CBAJ_T0059133.1 MGP_CBAJ_G0026627.1 mouse_genomes_project 2 187694273 187728654 + MGP_CBAJ_P0059133 Tshz2 protein_coding protein_coding MGP_CBAJ_T0053054.1 MGP_CBAJ_G0025210.1 mouse_genomes_project 2 26605640 26611056 - MGP_CBAJ_P0053054 Med22 protein_coding protein_coding MGP_CBAJ_T0053055.1 MGP_CBAJ_G0025210.1 mouse_genomes_project 2 26605966 26610948 - MGP_CBAJ_P0053055 Med22 protein_coding protein_coding MGP_CBAJ_T0053056.1 MGP_CBAJ_G0025210.1 mouse_genomes_project 2 26608487 26610957 - MGP_CBAJ_P0053056 Med22 protein_coding protein_coding MGP_CBAJ_T0010305.1 MGP_CBAJ_G0008443.1 mouse_genomes_project 2 99896551 99896612 - Mir6999 miRNA miRNA MGP_CBAJ_T0059443.1 MGP_CBAJ_G0026708.1 mouse_genomes_project 2 200222825 200225667 + MGP_CBAJ_P0059443 BC051628 protein_coding protein_coding MGP_CBAJ_T0059444.1 MGP_CBAJ_G0026708.1 mouse_genomes_project 2 200222849 200225262 + MGP_CBAJ_P0059444 BC051628 protein_coding protein_coding MGP_CBAJ_T0056596.1 MGP_CBAJ_G0026053.1 mouse_genomes_project 2 131326993 131344952 + MGP_CBAJ_P0056596 Gm28042 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056598.1 MGP_CBAJ_G0026053.1 mouse_genomes_project 2 131327004 131344952 + MGP_CBAJ_P0056598 Gm28042 protein_coding protein_coding MGP_CBAJ_T0056599.1 MGP_CBAJ_G0026053.1 mouse_genomes_project 2 131327007 131340935 + MGP_CBAJ_P0056599 Gm28042 protein_coding protein_coding MGP_CBAJ_T0056603.1 MGP_CBAJ_G0026053.1 mouse_genomes_project 2 131331209 131334347 + MGP_CBAJ_P0056603 Gm28042 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058645.1 MGP_CBAJ_G0026508.1 mouse_genomes_project 2 179428292 179464721 + L3mbtl1 protein_coding retained_intron MGP_CBAJ_T0058646.1 MGP_CBAJ_G0026508.1 mouse_genomes_project 2 179428294 179470033 + MGP_CBAJ_P0058646 L3mbtl1 protein_coding protein_coding MGP_CBAJ_T0058647.1 MGP_CBAJ_G0026508.1 mouse_genomes_project 2 179428295 179434719 + L3mbtl1 protein_coding processed_transcript MGP_CBAJ_T0058648.1 MGP_CBAJ_G0026508.1 mouse_genomes_project 2 179428295 179434719 + MGP_CBAJ_P0058648 L3mbtl1 protein_coding protein_coding MGP_CBAJ_T0058649.1 MGP_CBAJ_G0026508.1 mouse_genomes_project 2 179428320 179433077 + L3mbtl1 protein_coding processed_transcript MGP_CBAJ_T0058650.1 MGP_CBAJ_G0026508.1 mouse_genomes_project 2 179433836 179435369 + L3mbtl1 protein_coding processed_transcript MGP_CBAJ_T0058651.1 MGP_CBAJ_G0026508.1 mouse_genomes_project 2 179433836 179435369 + MGP_CBAJ_P0058651 L3mbtl1 protein_coding protein_coding MGP_CBAJ_T0098493.1 MGP_CBAJ_G0036750.1 mouse_genomes_project 2 199971468 199974803 + 9230112E08Rik sense_overlapping sense_overlapping MGP_CBAJ_T0098494.1 MGP_CBAJ_G0036750.1 mouse_genomes_project 2 199971775 199973138 + 9230112E08Rik sense_overlapping sense_overlapping MGP_CBAJ_T0007257.1 MGP_CBAJ_G0005944.1 mouse_genomes_project 2 166187318 166199945 + 4930442J19Rik lincRNA lincRNA MGP_CBAJ_T0059507.1 MGP_CBAJ_G0026718.1 mouse_genomes_project 2 200538439 200540214 + MGP_CBAJ_P0059507 Abhd16b protein_coding protein_coding MGP_CBAJ_T0007216.1 MGP_CBAJ_G0005910.1 mouse_genomes_project 2 136079426 136085748 - 4930517E11Rik lincRNA lincRNA MGP_CBAJ_T0056315.1 MGP_CBAJ_G0025986.1 mouse_genomes_project 2 122765906 122801599 + MGP_CBAJ_P0056315 Katnbl1 protein_coding protein_coding MGP_CBAJ_T0056316.1 MGP_CBAJ_G0025986.1 mouse_genomes_project 2 122765921 122794877 + Katnbl1 protein_coding retained_intron MGP_CBAJ_T0010341.1 MGP_CBAJ_G0008479.1 mouse_genomes_project 2 162569502 162569581 + Gm27420 miRNA miRNA MGP_CBAJ_T0054832.1 MGP_CBAJ_G0025522.1 mouse_genomes_project 2 74833800 75275144 + MGP_CBAJ_P0054832 Myo3b protein_coding protein_coding MGP_CBAJ_T0054833.1 MGP_CBAJ_G0025522.1 mouse_genomes_project 2 74876437 75275147 + MGP_CBAJ_P0054833 Myo3b protein_coding protein_coding MGP_CBAJ_T0054834.1 MGP_CBAJ_G0025522.1 mouse_genomes_project 2 74889563 74998348 + MGP_CBAJ_P0054834 Myo3b protein_coding protein_coding MGP_CBAJ_T0055580.1 MGP_CBAJ_G0025823.1 mouse_genomes_project 2 97775936 97776863 - MGP_CBAJ_P0055580 Olfr32 protein_coding protein_coding MGP_CBAJ_T0007111.1 MGP_CBAJ_G0005826.1 mouse_genomes_project 2 66369916 66374179 - Gm13565 lincRNA lincRNA MGP_CBAJ_T0058058.1 MGP_CBAJ_G0026396.1 mouse_genomes_project 2 169186820 169204408 - MGP_CBAJ_P0058058 Sun5 protein_coding protein_coding MGP_CBAJ_T0058059.1 MGP_CBAJ_G0026396.1 mouse_genomes_project 2 169192084 169204408 - Sun5 protein_coding processed_transcript MGP_CBAJ_T0058060.1 MGP_CBAJ_G0026396.1 mouse_genomes_project 2 169198722 169204408 - Sun5 protein_coding processed_transcript MGP_CBAJ_T0013426.1 MGP_CBAJ_G0011538.1 mouse_genomes_project 2 79998452 79998911 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0058792.1 MGP_CBAJ_G0026557.1 mouse_genomes_project 2 181396906 181401113 - MGP_CBAJ_P0058792 Wfdc16 protein_coding protein_coding MGP_CBAJ_T0017659.1 MGP_CBAJ_G0015234.1 mouse_genomes_project 2 184444697 184449478 + 1110018N20Rik processed_transcript processed_transcript MGP_CBAJ_T0017660.1 MGP_CBAJ_G0015234.1 mouse_genomes_project 2 184445101 184449744 + 1110018N20Rik processed_transcript processed_transcript MGP_CBAJ_T0017661.1 MGP_CBAJ_G0015234.1 mouse_genomes_project 2 184445655 184450027 + 1110018N20Rik processed_transcript processed_transcript MGP_CBAJ_T0100402.1 MGP_CBAJ_G0038657.1 mouse_genomes_project 2 162685627 162685940 + Gm24221 snoRNA snoRNA MGP_CBAJ_T0003943.1 MGP_CBAJ_G0003507.1 mouse_genomes_project 2 79942651 79948117 + 4930445N08Rik antisense antisense MGP_CBAJ_T0056614.1 MGP_CBAJ_G0026056.1 mouse_genomes_project 2 131389886 131458221 - MGP_CBAJ_P0056614 Ehd4 protein_coding protein_coding MGP_CBAJ_T0056615.1 MGP_CBAJ_G0026056.1 mouse_genomes_project 2 131403451 131430956 - Ehd4 protein_coding processed_transcript MGP_CBAJ_T0056616.1 MGP_CBAJ_G0026056.1 mouse_genomes_project 2 131403636 131438805 - Ehd4 protein_coding processed_transcript MGP_CBAJ_T0056617.1 MGP_CBAJ_G0026056.1 mouse_genomes_project 2 131423643 131458074 - Ehd4 protein_coding processed_transcript MGP_CBAJ_T0055559.1 MGP_CBAJ_G0025810.1 mouse_genomes_project 2 97440880 97446539 - MGP_CBAJ_P0055559 Olfr1256 protein_coding protein_coding MGP_CBAJ_T0055560.1 MGP_CBAJ_G0025810.1 mouse_genomes_project 2 97440880 97441801 - MGP_CBAJ_P0055560 Olfr1256 protein_coding protein_coding MGP_CBAJ_T0059252.1 MGP_CBAJ_G0026665.1 mouse_genomes_project 2 192950625 192958380 - MGP_CBAJ_P0059252 Slmo2 protein_coding protein_coding MGP_CBAJ_T0059253.1 MGP_CBAJ_G0026665.1 mouse_genomes_project 2 192951230 192958451 - MGP_CBAJ_P0059253 Slmo2 protein_coding protein_coding MGP_CBAJ_T0059254.1 MGP_CBAJ_G0026665.1 mouse_genomes_project 2 192954689 192958408 - Slmo2 protein_coding retained_intron MGP_CBAJ_T0059255.1 MGP_CBAJ_G0026665.1 mouse_genomes_project 2 192954898 192958448 - MGP_CBAJ_P0059255 Slmo2 protein_coding protein_coding MGP_CBAJ_T0052958.1 MGP_CBAJ_G0025197.1 mouse_genomes_project 2 25944158 25961968 - MGP_CBAJ_P0052958 Snapc4 protein_coding protein_coding MGP_CBAJ_T0052959.1 MGP_CBAJ_G0025197.1 mouse_genomes_project 2 25944160 25946418 - Snapc4 protein_coding processed_transcript MGP_CBAJ_T0052960.1 MGP_CBAJ_G0025197.1 mouse_genomes_project 2 25944167 25961972 - MGP_CBAJ_P0052960 Snapc4 protein_coding protein_coding MGP_CBAJ_T0052961.1 MGP_CBAJ_G0025197.1 mouse_genomes_project 2 25944169 25961951 - Snapc4 protein_coding processed_transcript MGP_CBAJ_T0052962.1 MGP_CBAJ_G0025197.1 mouse_genomes_project 2 25948007 25949164 - Snapc4 protein_coding processed_transcript MGP_CBAJ_T0052963.1 MGP_CBAJ_G0025197.1 mouse_genomes_project 2 25950850 25955025 - MGP_CBAJ_P0052963 Snapc4 protein_coding protein_coding MGP_CBAJ_T0052964.1 MGP_CBAJ_G0025197.1 mouse_genomes_project 2 25950879 25955005 - Snapc4 protein_coding processed_transcript MGP_CBAJ_T0052965.1 MGP_CBAJ_G0025197.1 mouse_genomes_project 2 25950900 25952536 - Snapc4 protein_coding processed_transcript MGP_CBAJ_T0052966.1 MGP_CBAJ_G0025197.1 mouse_genomes_project 2 25951377 25955522 - Snapc4 protein_coding processed_transcript MGP_CBAJ_T0052967.1 MGP_CBAJ_G0025197.1 mouse_genomes_project 2 25952226 25954749 - Snapc4 protein_coding processed_transcript MGP_CBAJ_T0052968.1 MGP_CBAJ_G0025197.1 mouse_genomes_project 2 25952226 25961954 - Snapc4 protein_coding processed_transcript MGP_CBAJ_T0052969.1 MGP_CBAJ_G0025197.1 mouse_genomes_project 2 25954955 25956132 - Snapc4 protein_coding processed_transcript MGP_CBAJ_T0052970.1 MGP_CBAJ_G0025197.1 mouse_genomes_project 2 25959031 25961972 - Snapc4 protein_coding processed_transcript MGP_CBAJ_T0052971.1 MGP_CBAJ_G0025197.1 mouse_genomes_project 2 25959736 25961945 - Snapc4 protein_coding processed_transcript MGP_CBAJ_T0007293.1 MGP_CBAJ_G0005975.1 mouse_genomes_project 2 183492426 183509490 - Gm14268 lincRNA lincRNA MGP_CBAJ_T0007294.1 MGP_CBAJ_G0005975.1 mouse_genomes_project 2 183492712 183509520 - Gm14268 lincRNA lincRNA MGP_CBAJ_T0003950.1 MGP_CBAJ_G0003511.1 mouse_genomes_project 2 82340499 82409625 + Gm13938 antisense antisense MGP_CBAJ_T0052126.1 MGP_CBAJ_G0025046.1 mouse_genomes_project 2 7701199 7703926 + MGP_CBAJ_P0052126 4930412O13Rik protein_coding protein_coding MGP_CBAJ_T0052127.1 MGP_CBAJ_G0025046.1 mouse_genomes_project 2 7702640 7703340 + MGP_CBAJ_P0052127 4930412O13Rik protein_coding protein_coding MGP_CBAJ_T0052308.1 MGP_CBAJ_G0025076.1 mouse_genomes_project 2 13033279 13034720 + Cacnb2 protein_coding retained_intron MGP_CBAJ_T0052309.1 MGP_CBAJ_G0025076.1 mouse_genomes_project 2 13034412 13447914 + MGP_CBAJ_P0052309 Cacnb2 protein_coding protein_coding MGP_CBAJ_T0052310.1 MGP_CBAJ_G0025076.1 mouse_genomes_project 2 13035228 13422238 + Cacnb2 protein_coding retained_intron MGP_CBAJ_T0052311.1 MGP_CBAJ_G0025076.1 mouse_genomes_project 2 13172293 13447913 + Cacnb2 protein_coding processed_transcript MGP_CBAJ_T0052312.1 MGP_CBAJ_G0025076.1 mouse_genomes_project 2 13198839 13423072 + Cacnb2 protein_coding retained_intron MGP_CBAJ_T0052313.1 MGP_CBAJ_G0025076.1 mouse_genomes_project 2 13280869 13433529 + Cacnb2 protein_coding retained_intron MGP_CBAJ_T0052314.1 MGP_CBAJ_G0025076.1 mouse_genomes_project 2 13280935 13446248 + MGP_CBAJ_P0052314 Cacnb2 protein_coding protein_coding MGP_CBAJ_T0052315.1 MGP_CBAJ_G0025076.1 mouse_genomes_project 2 13336703 13433444 + Cacnb2 protein_coding retained_intron MGP_CBAJ_T0052316.1 MGP_CBAJ_G0025076.1 mouse_genomes_project 2 13336704 13433529 + Cacnb2 protein_coding retained_intron MGP_CBAJ_T0052317.1 MGP_CBAJ_G0025076.1 mouse_genomes_project 2 13336717 13446186 + MGP_CBAJ_P0052317 Cacnb2 protein_coding protein_coding MGP_CBAJ_T0052318.1 MGP_CBAJ_G0025076.1 mouse_genomes_project 2 13337039 13425048 + Cacnb2 protein_coding retained_intron MGP_CBAJ_T0052319.1 MGP_CBAJ_G0025076.1 mouse_genomes_project 2 13337469 13362271 + MGP_CBAJ_P0052319 Cacnb2 protein_coding protein_coding MGP_CBAJ_T0052320.1 MGP_CBAJ_G0025076.1 mouse_genomes_project 2 13337796 13426800 + Cacnb2 protein_coding retained_intron MGP_CBAJ_T0052321.1 MGP_CBAJ_G0025076.1 mouse_genomes_project 2 13337800 13447102 + Cacnb2 protein_coding retained_intron MGP_CBAJ_T0052322.1 MGP_CBAJ_G0025076.1 mouse_genomes_project 2 13422156 13441031 + MGP_CBAJ_P0052322 Cacnb2 protein_coding protein_coding MGP_CBAJ_T0052323.1 MGP_CBAJ_G0025076.1 mouse_genomes_project 2 13442149 13444451 + Cacnb2 protein_coding retained_intron MGP_CBAJ_T0010258.1 MGP_CBAJ_G0008396.1 mouse_genomes_project 2 24911187 24911243 + Mir3087 miRNA miRNA MGP_CBAJ_T0017606.1 MGP_CBAJ_G0015209.1 mouse_genomes_project 2 140657564 140904813 - Gm14005 processed_transcript processed_transcript MGP_CBAJ_T0017607.1 MGP_CBAJ_G0015209.1 mouse_genomes_project 2 140772185 140904994 - Gm14005 processed_transcript processed_transcript MGP_CBAJ_T0017608.1 MGP_CBAJ_G0015209.1 mouse_genomes_project 2 140794341 140905020 - Gm14005 processed_transcript processed_transcript MGP_CBAJ_T0017609.1 MGP_CBAJ_G0015209.1 mouse_genomes_project 2 140794517 140904843 - Gm14005 processed_transcript processed_transcript MGP_CBAJ_T0017610.1 MGP_CBAJ_G0015209.1 mouse_genomes_project 2 140821805 140904913 - Gm14005 processed_transcript processed_transcript MGP_CBAJ_T0017611.1 MGP_CBAJ_G0015209.1 mouse_genomes_project 2 140845377 140904859 - Gm14005 processed_transcript processed_transcript MGP_CBAJ_T0017612.1 MGP_CBAJ_G0015209.1 mouse_genomes_project 2 140845378 140904564 - Gm14005 processed_transcript processed_transcript MGP_CBAJ_T0052650.1 MGP_CBAJ_G0025133.1 mouse_genomes_project 2 24613862 24616444 + MGP_CBAJ_P0052650 Nrarp protein_coding protein_coding MGP_CBAJ_T0059590.1 MGP_CBAJ_G0026730.1 mouse_genomes_project 2 200861054 200938644 + MGP_CBAJ_P0059590 Myt1 protein_coding protein_coding MGP_CBAJ_T0059591.1 MGP_CBAJ_G0026730.1 mouse_genomes_project 2 200861118 200936886 + MGP_CBAJ_P0059591 Myt1 protein_coding protein_coding MGP_CBAJ_T0059592.1 MGP_CBAJ_G0026730.1 mouse_genomes_project 2 200864751 200901907 + Myt1 protein_coding processed_transcript MGP_CBAJ_T0059593.1 MGP_CBAJ_G0026730.1 mouse_genomes_project 2 200865025 200913552 + MGP_CBAJ_P0059593 Myt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059594.1 MGP_CBAJ_G0026730.1 mouse_genomes_project 2 200885567 200924155 + MGP_CBAJ_P0059594 Myt1 protein_coding protein_coding MGP_CBAJ_T0059595.1 MGP_CBAJ_G0026730.1 mouse_genomes_project 2 200902321 200938579 + Myt1 protein_coding retained_intron MGP_CBAJ_T0059596.1 MGP_CBAJ_G0026730.1 mouse_genomes_project 2 200903612 200915083 + Myt1 protein_coding processed_transcript MGP_CBAJ_T0059597.1 MGP_CBAJ_G0026730.1 mouse_genomes_project 2 200919740 200928641 + MGP_CBAJ_P0059597 Myt1 protein_coding protein_coding MGP_CBAJ_T0059598.1 MGP_CBAJ_G0026730.1 mouse_genomes_project 2 200928100 200930539 + Myt1 protein_coding retained_intron MGP_CBAJ_T0007067.1 MGP_CBAJ_G0005790.1 mouse_genomes_project 2 28180158 28189015 - Gm13373 lincRNA lincRNA MGP_CBAJ_T0007253.1 MGP_CBAJ_G0005941.1 mouse_genomes_project 2 164412167 164467750 - Gm14133 lincRNA lincRNA MGP_CBAJ_T0007254.1 MGP_CBAJ_G0005941.1 mouse_genomes_project 2 164422143 164467792 - Gm14133 lincRNA lincRNA MGP_CBAJ_T0053784.1 MGP_CBAJ_G0025324.1 mouse_genomes_project 2 33207212 33208223 + Pip5kl1 protein_coding processed_transcript MGP_CBAJ_T0053785.1 MGP_CBAJ_G0025324.1 mouse_genomes_project 2 33208133 33219378 + MGP_CBAJ_P0053785 Pip5kl1 protein_coding protein_coding MGP_CBAJ_T0053786.1 MGP_CBAJ_G0025324.1 mouse_genomes_project 2 33208258 33219367 + MGP_CBAJ_P0053786 Pip5kl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053787.1 MGP_CBAJ_G0025324.1 mouse_genomes_project 2 33215522 33219368 + Pip5kl1 protein_coding retained_intron MGP_CBAJ_T0055524.1 MGP_CBAJ_G0025784.1 mouse_genomes_project 2 96652599 96653535 - MGP_CBAJ_P0055524 Olfr1223 protein_coding protein_coding MGP_CBAJ_T0059183.1 MGP_CBAJ_G0026647.1 mouse_genomes_project 2 191322909 191334921 + MGP_CBAJ_P0059183 Rbm38 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059184.1 MGP_CBAJ_G0026647.1 mouse_genomes_project 2 191322923 191335736 + Rbm38 protein_coding retained_intron MGP_CBAJ_T0059185.1 MGP_CBAJ_G0026647.1 mouse_genomes_project 2 191323050 191334817 + MGP_CBAJ_P0059185 Rbm38 protein_coding protein_coding MGP_CBAJ_T0059186.1 MGP_CBAJ_G0026647.1 mouse_genomes_project 2 191323121 191334658 + MGP_CBAJ_P0059186 Rbm38 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059187.1 MGP_CBAJ_G0026647.1 mouse_genomes_project 2 191323448 191334717 + MGP_CBAJ_P0059187 Rbm38 protein_coding protein_coding MGP_CBAJ_T0059188.1 MGP_CBAJ_G0026647.1 mouse_genomes_project 2 191324059 191335708 + Rbm38 protein_coding retained_intron MGP_CBAJ_T0059608.1 MGP_CBAJ_G0026732.1 mouse_genomes_project 2 200977913 200984407 + MGP_CBAJ_P0059608 Polr3k protein_coding protein_coding MGP_CBAJ_T0059609.1 MGP_CBAJ_G0026732.1 mouse_genomes_project 2 200977936 200979786 + Polr3k protein_coding retained_intron MGP_CBAJ_T0054149.1 MGP_CBAJ_G0025403.1 mouse_genomes_project 2 38446416 38447400 + MGP_CBAJ_P0054149 Olfr368 protein_coding protein_coding MGP_CBAJ_T0055638.1 MGP_CBAJ_G0025836.1 mouse_genomes_project 2 98730236 98783847 + Celf1 protein_coding processed_transcript MGP_CBAJ_T0055639.1 MGP_CBAJ_G0025836.1 mouse_genomes_project 2 98730743 98815824 + MGP_CBAJ_P0055639 Celf1 protein_coding protein_coding MGP_CBAJ_T0055640.1 MGP_CBAJ_G0025836.1 mouse_genomes_project 2 98730804 98794708 + Celf1 protein_coding processed_transcript MGP_CBAJ_T0055641.1 MGP_CBAJ_G0025836.1 mouse_genomes_project 2 98730883 98797602 + Celf1 protein_coding processed_transcript MGP_CBAJ_T0055642.1 MGP_CBAJ_G0025836.1 mouse_genomes_project 2 98732221 98815068 + MGP_CBAJ_P0055642 Celf1 protein_coding protein_coding MGP_CBAJ_T0055643.1 MGP_CBAJ_G0025836.1 mouse_genomes_project 2 98760058 98783909 + Celf1 protein_coding processed_transcript MGP_CBAJ_T0055644.1 MGP_CBAJ_G0025836.1 mouse_genomes_project 2 98783838 98815817 + MGP_CBAJ_P0055644 Celf1 protein_coding protein_coding MGP_CBAJ_T0055645.1 MGP_CBAJ_G0025836.1 mouse_genomes_project 2 98794670 98815824 + MGP_CBAJ_P0055645 Celf1 protein_coding protein_coding MGP_CBAJ_T0055646.1 MGP_CBAJ_G0025836.1 mouse_genomes_project 2 98808815 98809699 + Celf1 protein_coding processed_transcript MGP_CBAJ_T0058245.1 MGP_CBAJ_G0026442.1 mouse_genomes_project 2 171405085 171499107 - Uqcc1 protein_coding processed_transcript MGP_CBAJ_T0058246.1 MGP_CBAJ_G0026442.1 mouse_genomes_project 2 171405085 171499107 - MGP_CBAJ_P0058246 Uqcc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058247.1 MGP_CBAJ_G0026442.1 mouse_genomes_project 2 171405087 171499090 - MGP_CBAJ_P0058247 Uqcc1 protein_coding protein_coding MGP_CBAJ_T0058248.1 MGP_CBAJ_G0026442.1 mouse_genomes_project 2 171405087 171499083 - MGP_CBAJ_P0058248 Uqcc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058249.1 MGP_CBAJ_G0026442.1 mouse_genomes_project 2 171405112 171499357 - MGP_CBAJ_P0058249 Uqcc1 protein_coding protein_coding MGP_CBAJ_T0058250.1 MGP_CBAJ_G0026442.1 mouse_genomes_project 2 171406128 171499065 - MGP_CBAJ_P0058250 Uqcc1 protein_coding protein_coding MGP_CBAJ_T0058251.1 MGP_CBAJ_G0026442.1 mouse_genomes_project 2 171406365 171409901 - Uqcc1 protein_coding processed_transcript MGP_CBAJ_T0058252.1 MGP_CBAJ_G0026442.1 mouse_genomes_project 2 171406422 171499091 - MGP_CBAJ_P0058252 Uqcc1 protein_coding protein_coding MGP_CBAJ_T0058253.1 MGP_CBAJ_G0026442.1 mouse_genomes_project 2 171406441 171499357 - MGP_CBAJ_P0058253 Uqcc1 protein_coding protein_coding MGP_CBAJ_T0058254.1 MGP_CBAJ_G0026442.1 mouse_genomes_project 2 171406632 171499079 - MGP_CBAJ_P0058254 Uqcc1 protein_coding protein_coding MGP_CBAJ_T0058255.1 MGP_CBAJ_G0026442.1 mouse_genomes_project 2 171409111 171499310 - Uqcc1 protein_coding retained_intron MGP_CBAJ_T0058256.1 MGP_CBAJ_G0026442.1 mouse_genomes_project 2 171409575 171499090 - MGP_CBAJ_P0058256 Uqcc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058257.1 MGP_CBAJ_G0026442.1 mouse_genomes_project 2 171423769 171499097 - Uqcc1 protein_coding retained_intron MGP_CBAJ_T0058258.1 MGP_CBAJ_G0026442.1 mouse_genomes_project 2 171436949 171499103 - Uqcc1 protein_coding processed_transcript MGP_CBAJ_T0058259.1 MGP_CBAJ_G0026442.1 mouse_genomes_project 2 171453299 171499107 - MGP_CBAJ_P0058259 Uqcc1 protein_coding protein_coding MGP_CBAJ_T0058260.1 MGP_CBAJ_G0026442.1 mouse_genomes_project 2 171453311 171479574 - Uqcc1 protein_coding retained_intron MGP_CBAJ_T0058261.1 MGP_CBAJ_G0026442.1 mouse_genomes_project 2 171453318 171499323 - Uqcc1 protein_coding processed_transcript MGP_CBAJ_T0058262.1 MGP_CBAJ_G0026442.1 mouse_genomes_project 2 171476938 171499093 - Uqcc1 protein_coding retained_intron MGP_CBAJ_T0058263.1 MGP_CBAJ_G0026442.1 mouse_genomes_project 2 171478333 171499097 - MGP_CBAJ_P0058263 Uqcc1 protein_coding protein_coding MGP_CBAJ_T0057290.1 MGP_CBAJ_G0026199.1 mouse_genomes_project 2 143091292 143098128 - MGP_CBAJ_P0057290 Cpxm1 protein_coding protein_coding MGP_CBAJ_T0057291.1 MGP_CBAJ_G0026199.1 mouse_genomes_project 2 143091293 143093794 - Cpxm1 protein_coding retained_intron MGP_CBAJ_T0055219.1 MGP_CBAJ_G0025601.1 mouse_genomes_project 2 86687456 86690441 + MGP_CBAJ_P0055219 protein_coding protein_coding MGP_CBAJ_T0056551.1 MGP_CBAJ_G0026047.1 mouse_genomes_project 2 131013491 131022350 - MGP_CBAJ_P0056551 Ltk protein_coding protein_coding MGP_CBAJ_T0056552.1 MGP_CBAJ_G0026047.1 mouse_genomes_project 2 131013493 131020658 - Ltk protein_coding retained_intron MGP_CBAJ_T0056553.1 MGP_CBAJ_G0026047.1 mouse_genomes_project 2 131013493 131022449 - MGP_CBAJ_P0056553 Ltk protein_coding protein_coding MGP_CBAJ_T0056554.1 MGP_CBAJ_G0026047.1 mouse_genomes_project 2 131013497 131022486 - MGP_CBAJ_P0056554 Ltk protein_coding protein_coding MGP_CBAJ_T0056555.1 MGP_CBAJ_G0026047.1 mouse_genomes_project 2 131013499 131020662 - MGP_CBAJ_P0056555 Ltk protein_coding protein_coding MGP_CBAJ_T0056556.1 MGP_CBAJ_G0026047.1 mouse_genomes_project 2 131013501 131020656 - Ltk protein_coding retained_intron MGP_CBAJ_T0057130.1 MGP_CBAJ_G0026159.1 mouse_genomes_project 2 139814423 139822720 - MGP_CBAJ_P0057130 Fahd2a protein_coding protein_coding MGP_CBAJ_T0057131.1 MGP_CBAJ_G0026159.1 mouse_genomes_project 2 139814424 139822735 - Fahd2a protein_coding retained_intron MGP_CBAJ_T0057132.1 MGP_CBAJ_G0026159.1 mouse_genomes_project 2 139814479 139816520 - Fahd2a protein_coding processed_transcript MGP_CBAJ_T0057133.1 MGP_CBAJ_G0026159.1 mouse_genomes_project 2 139815045 139822727 - Fahd2a protein_coding processed_transcript MGP_CBAJ_T0057134.1 MGP_CBAJ_G0026159.1 mouse_genomes_project 2 139816322 139822650 - Fahd2a protein_coding processed_transcript MGP_CBAJ_T0057135.1 MGP_CBAJ_G0026159.1 mouse_genomes_project 2 139816611 139822686 - Fahd2a protein_coding retained_intron MGP_CBAJ_T0057136.1 MGP_CBAJ_G0026159.1 mouse_genomes_project 2 139818631 139822678 - Fahd2a protein_coding processed_transcript MGP_CBAJ_T0013293.1 MGP_CBAJ_G0011405.1 mouse_genomes_project 2 26159289 26159858 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0054120.1 MGP_CBAJ_G0025376.1 mouse_genomes_project 2 37451542 37452463 + MGP_CBAJ_P0054120 Olfr338 protein_coding protein_coding MGP_CBAJ_T0004081.1 MGP_CBAJ_G0003605.1 mouse_genomes_project 2 180254880 180263830 - Gm16316 antisense antisense MGP_CBAJ_T0013252.1 MGP_CBAJ_G0011364.1 mouse_genomes_project 2 13158872 13159863 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007223.1 MGP_CBAJ_G0005917.1 mouse_genomes_project 2 140899133 140900241 + Gm14010 lincRNA lincRNA MGP_CBAJ_T0057296.1 MGP_CBAJ_G0026202.1 mouse_genomes_project 2 143107037 143108467 + MGP_CBAJ_P0057296 Tmem239 protein_coding protein_coding MGP_CBAJ_T0052869.1 MGP_CBAJ_G0025175.1 mouse_genomes_project 2 25152644 25156195 + MGP_CBAJ_P0052869 Lcn5 protein_coding protein_coding MGP_CBAJ_T0052870.1 MGP_CBAJ_G0025175.1 mouse_genomes_project 2 25152647 25156339 + MGP_CBAJ_P0052870 Lcn5 protein_coding protein_coding MGP_CBAJ_T0052871.1 MGP_CBAJ_G0025175.1 mouse_genomes_project 2 25152647 25156671 + MGP_CBAJ_P0052871 Lcn5 protein_coding protein_coding MGP_CBAJ_T0052872.1 MGP_CBAJ_G0025175.1 mouse_genomes_project 2 25155614 25156335 + Lcn5 protein_coding processed_transcript MGP_CBAJ_T0057417.1 MGP_CBAJ_G0026228.1 mouse_genomes_project 2 144090612 144116535 + Pank2 protein_coding processed_transcript MGP_CBAJ_T0057418.1 MGP_CBAJ_G0026228.1 mouse_genomes_project 2 144090617 144132149 + MGP_CBAJ_P0057418 Pank2 protein_coding protein_coding MGP_CBAJ_T0057419.1 MGP_CBAJ_G0026228.1 mouse_genomes_project 2 144090642 144129449 + MGP_CBAJ_P0057419 Pank2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057420.1 MGP_CBAJ_G0026228.1 mouse_genomes_project 2 144090685 144132147 + MGP_CBAJ_P0057420 Pank2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057421.1 MGP_CBAJ_G0026228.1 mouse_genomes_project 2 144090913 144129292 + MGP_CBAJ_P0057421 Pank2 protein_coding protein_coding MGP_CBAJ_T0057422.1 MGP_CBAJ_G0026228.1 mouse_genomes_project 2 144090956 144129652 + Pank2 protein_coding processed_transcript MGP_CBAJ_T0057423.1 MGP_CBAJ_G0026228.1 mouse_genomes_project 2 144107176 144126457 + MGP_CBAJ_P0057423 Pank2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057424.1 MGP_CBAJ_G0026228.1 mouse_genomes_project 2 144107284 144129269 + MGP_CBAJ_P0057424 Pank2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0017664.1 MGP_CBAJ_G0015237.1 mouse_genomes_project 2 190071385 190077258 - 1700028P15Rik processed_transcript lincRNA MGP_CBAJ_T0017665.1 MGP_CBAJ_G0015237.1 mouse_genomes_project 2 190072692 190076589 - 1700028P15Rik processed_transcript lincRNA MGP_CBAJ_T0017666.1 MGP_CBAJ_G0015237.1 mouse_genomes_project 2 190072693 190077283 - 1700028P15Rik processed_transcript retained_intron MGP_CBAJ_T0057469.1 MGP_CBAJ_G0026238.1 mouse_genomes_project 2 145200438 145211250 - MGP_CBAJ_P0057469 Tmem230 protein_coding protein_coding MGP_CBAJ_T0057470.1 MGP_CBAJ_G0026238.1 mouse_genomes_project 2 145200438 145211212 - MGP_CBAJ_P0057470 Tmem230 protein_coding protein_coding MGP_CBAJ_T0057471.1 MGP_CBAJ_G0026238.1 mouse_genomes_project 2 145200438 145211097 - MGP_CBAJ_P0057471 Tmem230 protein_coding protein_coding MGP_CBAJ_T0057472.1 MGP_CBAJ_G0026238.1 mouse_genomes_project 2 145200440 145211231 - MGP_CBAJ_P0057472 Tmem230 protein_coding protein_coding MGP_CBAJ_T0057473.1 MGP_CBAJ_G0026238.1 mouse_genomes_project 2 145208762 145211202 - Tmem230 protein_coding processed_transcript MGP_CBAJ_T0057474.1 MGP_CBAJ_G0026238.1 mouse_genomes_project 2 145209294 145211199 - Tmem230 protein_coding retained_intron MGP_CBAJ_T0100417.1 MGP_CBAJ_G0038672.1 mouse_genomes_project 2 174355751 174355884 + Gm25129 snoRNA snoRNA MGP_CBAJ_T0057430.1 MGP_CBAJ_G0026230.1 mouse_genomes_project 2 144360969 144392286 + MGP_CBAJ_P0057430 Smox protein_coding protein_coding MGP_CBAJ_T0057431.1 MGP_CBAJ_G0026230.1 mouse_genomes_project 2 144361237 144397258 + MGP_CBAJ_P0057431 Smox protein_coding protein_coding MGP_CBAJ_T0057432.1 MGP_CBAJ_G0026230.1 mouse_genomes_project 2 144361396 144392325 + MGP_CBAJ_P0057432 Smox protein_coding nonsense_mediated_decay MGP_CBAJ_T0057433.1 MGP_CBAJ_G0026230.1 mouse_genomes_project 2 144361416 144397247 + Smox protein_coding retained_intron MGP_CBAJ_T0057434.1 MGP_CBAJ_G0026230.1 mouse_genomes_project 2 144361416 144397247 + MGP_CBAJ_P0057434 Smox protein_coding protein_coding MGP_CBAJ_T0057435.1 MGP_CBAJ_G0026230.1 mouse_genomes_project 2 144361416 144397247 + MGP_CBAJ_P0057435 Smox protein_coding protein_coding MGP_CBAJ_T0057436.1 MGP_CBAJ_G0026230.1 mouse_genomes_project 2 144361416 144397247 + MGP_CBAJ_P0057436 Smox protein_coding protein_coding MGP_CBAJ_T0057437.1 MGP_CBAJ_G0026230.1 mouse_genomes_project 2 144361416 144397247 + MGP_CBAJ_P0057437 Smox protein_coding nonsense_mediated_decay MGP_CBAJ_T0057438.1 MGP_CBAJ_G0026230.1 mouse_genomes_project 2 144361416 144397247 + MGP_CBAJ_P0057438 Smox protein_coding protein_coding MGP_CBAJ_T0057439.1 MGP_CBAJ_G0026230.1 mouse_genomes_project 2 144361416 144397247 + MGP_CBAJ_P0057439 Smox protein_coding protein_coding MGP_CBAJ_T0057440.1 MGP_CBAJ_G0026230.1 mouse_genomes_project 2 144361416 144397247 + MGP_CBAJ_P0057440 Smox protein_coding protein_coding MGP_CBAJ_T0057441.1 MGP_CBAJ_G0026230.1 mouse_genomes_project 2 144361437 144397997 + MGP_CBAJ_P0057441 Smox protein_coding protein_coding MGP_CBAJ_T0057442.1 MGP_CBAJ_G0026230.1 mouse_genomes_project 2 144361466 144397242 + MGP_CBAJ_P0057442 Smox protein_coding protein_coding MGP_CBAJ_T0057443.1 MGP_CBAJ_G0026230.1 mouse_genomes_project 2 144361737 144384151 + MGP_CBAJ_P0057443 Smox protein_coding protein_coding MGP_CBAJ_T0057444.1 MGP_CBAJ_G0026230.1 mouse_genomes_project 2 144380925 144384188 + Smox protein_coding processed_transcript MGP_CBAJ_T0057445.1 MGP_CBAJ_G0026230.1 mouse_genomes_project 2 144392228 144396954 + MGP_CBAJ_P0057445 Smox protein_coding nonsense_mediated_decay MGP_CBAJ_T0057446.1 MGP_CBAJ_G0026230.1 mouse_genomes_project 2 144393969 144397216 + Smox protein_coding retained_intron MGP_CBAJ_T0007209.1 MGP_CBAJ_G0005905.1 mouse_genomes_project 2 128860947 128956961 + 4930412B13Rik lincRNA lincRNA MGP_CBAJ_T0059520.1 MGP_CBAJ_G0026720.1 mouse_genomes_project 2 200565694 200603760 + MGP_CBAJ_P0059520 Dnajc5 protein_coding protein_coding MGP_CBAJ_T0059521.1 MGP_CBAJ_G0026720.1 mouse_genomes_project 2 200565735 200600860 + MGP_CBAJ_P0059521 Dnajc5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059522.1 MGP_CBAJ_G0026720.1 mouse_genomes_project 2 200565760 200600858 + MGP_CBAJ_P0059522 Dnajc5 protein_coding protein_coding MGP_CBAJ_T0059523.1 MGP_CBAJ_G0026720.1 mouse_genomes_project 2 200566021 200597398 + MGP_CBAJ_P0059523 Dnajc5 protein_coding protein_coding MGP_CBAJ_T0059524.1 MGP_CBAJ_G0026720.1 mouse_genomes_project 2 200566156 200598216 + MGP_CBAJ_P0059524 Dnajc5 protein_coding protein_coding MGP_CBAJ_T0059525.1 MGP_CBAJ_G0026720.1 mouse_genomes_project 2 200597951 200598884 + Dnajc5 protein_coding processed_transcript MGP_CBAJ_T0001064.1 MGP_CBAJ_G0000995.1 mouse_genomes_project 2 163493333 163493698 - TEC TEC MGP_CBAJ_T0101818.1 MGP_CBAJ_G0039849.1 mouse_genomes_project 2 97726531 97727461 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0052535.1 MGP_CBAJ_G0025118.1 mouse_genomes_project 2 23586771 23590666 + MGP_CBAJ_P0052535 Il1f5 protein_coding protein_coding MGP_CBAJ_T0052536.1 MGP_CBAJ_G0025118.1 mouse_genomes_project 2 23587028 23588836 + Il1f5 protein_coding retained_intron MGP_CBAJ_T0052537.1 MGP_CBAJ_G0025118.1 mouse_genomes_project 2 23587039 23591387 + Il1f5 protein_coding processed_transcript MGP_CBAJ_T0052538.1 MGP_CBAJ_G0025118.1 mouse_genomes_project 2 23587256 23591130 + MGP_CBAJ_P0052538 Il1f5 protein_coding protein_coding MGP_CBAJ_T0055769.1 MGP_CBAJ_G0025852.1 mouse_genomes_project 2 99550009 99556111 - MGP_CBAJ_P0055769 Zfp408 protein_coding protein_coding MGP_CBAJ_T0055770.1 MGP_CBAJ_G0025852.1 mouse_genomes_project 2 99550015 99556123 - MGP_CBAJ_P0055770 Zfp408 protein_coding protein_coding MGP_CBAJ_T0055771.1 MGP_CBAJ_G0025852.1 mouse_genomes_project 2 99552605 99554563 - Zfp408 protein_coding retained_intron MGP_CBAJ_T0055772.1 MGP_CBAJ_G0025852.1 mouse_genomes_project 2 99553995 99556091 - MGP_CBAJ_P0055772 Zfp408 protein_coding nonsense_mediated_decay MGP_CBAJ_T0055773.1 MGP_CBAJ_G0025852.1 mouse_genomes_project 2 99554343 99556075 - Zfp408 protein_coding processed_transcript MGP_CBAJ_T0055774.1 MGP_CBAJ_G0025852.1 mouse_genomes_project 2 99555267 99556092 - Zfp408 protein_coding processed_transcript MGP_CBAJ_T0003840.1 MGP_CBAJ_G0003433.1 mouse_genomes_project 2 24613885 24616444 - Gm38287 antisense antisense MGP_CBAJ_T0010256.1 MGP_CBAJ_G0008394.1 mouse_genomes_project 2 24470660 24470727 - Gm24328 miRNA miRNA MGP_CBAJ_T0017497.1 MGP_CBAJ_G0015147.1 mouse_genomes_project 2 27695721 27699849 - 2810430I11Rik processed_transcript processed_transcript MGP_CBAJ_T0001000.1 MGP_CBAJ_G0000932.1 mouse_genomes_project 2 10518347 10521398 - TEC TEC MGP_CBAJ_T0058215.1 MGP_CBAJ_G0026434.1 mouse_genomes_project 2 171171964 171241434 - MGP_CBAJ_P0058215 Trpc4ap protein_coding protein_coding MGP_CBAJ_T0058216.1 MGP_CBAJ_G0026434.1 mouse_genomes_project 2 171172001 171241382 - MGP_CBAJ_P0058216 Trpc4ap protein_coding protein_coding MGP_CBAJ_T0058217.1 MGP_CBAJ_G0026434.1 mouse_genomes_project 2 171172438 171175436 - Trpc4ap protein_coding processed_transcript MGP_CBAJ_T0058218.1 MGP_CBAJ_G0026434.1 mouse_genomes_project 2 171173289 171175482 - Trpc4ap protein_coding retained_intron MGP_CBAJ_T0058219.1 MGP_CBAJ_G0026434.1 mouse_genomes_project 2 171176675 171216344 - Trpc4ap protein_coding retained_intron MGP_CBAJ_T0058220.1 MGP_CBAJ_G0026434.1 mouse_genomes_project 2 171176682 171178577 - Trpc4ap protein_coding retained_intron MGP_CBAJ_T0058221.1 MGP_CBAJ_G0026434.1 mouse_genomes_project 2 171181655 171207098 - Trpc4ap protein_coding retained_intron MGP_CBAJ_T0058222.1 MGP_CBAJ_G0026434.1 mouse_genomes_project 2 171196347 171241432 - Trpc4ap protein_coding retained_intron MGP_CBAJ_T0058223.1 MGP_CBAJ_G0026434.1 mouse_genomes_project 2 171209165 171211793 - Trpc4ap protein_coding retained_intron MGP_CBAJ_T0058224.1 MGP_CBAJ_G0026434.1 mouse_genomes_project 2 171216349 171241173 - Trpc4ap protein_coding processed_transcript MGP_CBAJ_T0004017.1 MGP_CBAJ_G0003557.1 mouse_genomes_project 2 145216697 145224688 + AV099323 antisense antisense MGP_CBAJ_T0052188.1 MGP_CBAJ_G0025058.1 mouse_genomes_project 2 9687030 9755615 + MGP_CBAJ_P0052188 Il2ra protein_coding protein_coding MGP_CBAJ_T0052189.1 MGP_CBAJ_G0025058.1 mouse_genomes_project 2 9687072 9692972 + MGP_CBAJ_P0052189 Il2ra protein_coding protein_coding MGP_CBAJ_T0052190.1 MGP_CBAJ_G0025058.1 mouse_genomes_project 2 9742141 9742643 + Il2ra protein_coding retained_intron MGP_CBAJ_T0056821.1 MGP_CBAJ_G0026084.1 mouse_genomes_project 2 132785996 132788326 + MGP_CBAJ_P0056821 Ckmt1 protein_coding protein_coding MGP_CBAJ_T0056822.1 MGP_CBAJ_G0026084.1 mouse_genomes_project 2 132786058 132792000 + MGP_CBAJ_P0056822 Ckmt1 protein_coding protein_coding MGP_CBAJ_T0056823.1 MGP_CBAJ_G0026084.1 mouse_genomes_project 2 132786122 132788063 + MGP_CBAJ_P0056823 Ckmt1 protein_coding protein_coding MGP_CBAJ_T0056824.1 MGP_CBAJ_G0026084.1 mouse_genomes_project 2 132786189 132789254 + MGP_CBAJ_P0056824 Ckmt1 protein_coding protein_coding MGP_CBAJ_T0056825.1 MGP_CBAJ_G0026084.1 mouse_genomes_project 2 132786894 132792000 + MGP_CBAJ_P0056825 Ckmt1 protein_coding protein_coding MGP_CBAJ_T0056826.1 MGP_CBAJ_G0026084.1 mouse_genomes_project 2 132786940 132789251 + MGP_CBAJ_P0056826 Ckmt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056827.1 MGP_CBAJ_G0026084.1 mouse_genomes_project 2 132786943 132788647 + Ckmt1 protein_coding retained_intron MGP_CBAJ_T0056828.1 MGP_CBAJ_G0026084.1 mouse_genomes_project 2 132786950 132788893 + MGP_CBAJ_P0056828 Ckmt1 protein_coding protein_coding MGP_CBAJ_T0056829.1 MGP_CBAJ_G0026084.1 mouse_genomes_project 2 132787128 132788305 + MGP_CBAJ_P0056829 Ckmt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056830.1 MGP_CBAJ_G0026084.1 mouse_genomes_project 2 132791184 132791999 + Ckmt1 protein_coding retained_intron MGP_CBAJ_T0056168.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115224185 115254439 + MGP_CBAJ_P0056168 Pax6 protein_coding protein_coding MGP_CBAJ_T0056169.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115224185 115254439 + MGP_CBAJ_P0056169 Pax6 protein_coding protein_coding MGP_CBAJ_T0056170.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115224205 115253537 + Pax6 protein_coding processed_transcript MGP_CBAJ_T0056171.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115224220 115240956 + MGP_CBAJ_P0056171 Pax6 protein_coding protein_coding MGP_CBAJ_T0056172.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115227133 115254317 + MGP_CBAJ_P0056172 Pax6 protein_coding protein_coding MGP_CBAJ_T0056173.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115229140 115231054 + Pax6 protein_coding processed_transcript MGP_CBAJ_T0056174.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115230286 115231135 + Pax6 protein_coding processed_transcript MGP_CBAJ_T0056175.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115230368 115231000 + Pax6 protein_coding retained_intron MGP_CBAJ_T0056176.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115230368 115254318 + MGP_CBAJ_P0056176 Pax6 protein_coding protein_coding MGP_CBAJ_T0056177.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115230610 115254419 + MGP_CBAJ_P0056177 Pax6 protein_coding protein_coding MGP_CBAJ_T0056178.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115230690 115254436 + MGP_CBAJ_P0056178 Pax6 protein_coding protein_coding MGP_CBAJ_T0056179.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115230704 115254146 + MGP_CBAJ_P0056179 Pax6 protein_coding protein_coding MGP_CBAJ_T0056180.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115231290 115254146 + MGP_CBAJ_P0056180 Pax6 protein_coding protein_coding MGP_CBAJ_T0056181.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115231291 115254436 + MGP_CBAJ_P0056181 Pax6 protein_coding protein_coding MGP_CBAJ_T0056182.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115235501 115242882 + MGP_CBAJ_P0056182 Pax6 protein_coding protein_coding MGP_CBAJ_T0056183.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115236977 115249306 + Pax6 protein_coding processed_transcript MGP_CBAJ_T0056184.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115238822 115242069 + Pax6 protein_coding retained_intron MGP_CBAJ_T0056185.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115239573 115249317 + Pax6 protein_coding processed_transcript MGP_CBAJ_T0056186.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115239618 115249349 + Pax6 protein_coding processed_transcript MGP_CBAJ_T0056187.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115239645 115253428 + Pax6 protein_coding retained_intron MGP_CBAJ_T0056188.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115239647 115248811 + Pax6 protein_coding processed_transcript MGP_CBAJ_T0056189.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115239657 115249327 + Pax6 protein_coding processed_transcript MGP_CBAJ_T0056190.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115239747 115248782 + Pax6 protein_coding processed_transcript MGP_CBAJ_T0056191.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115240839 115242030 + Pax6 protein_coding retained_intron MGP_CBAJ_T0056192.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115242408 115254439 + Pax6 protein_coding processed_transcript MGP_CBAJ_T0056193.1 MGP_CBAJ_G0025928.1 mouse_genomes_project 2 115249566 115250209 + Pax6 protein_coding retained_intron MGP_CBAJ_T0054524.1 MGP_CBAJ_G0025469.1 mouse_genomes_project 2 63487293 63524664 - MGP_CBAJ_P0054524 Wdsub1 protein_coding unknown_likely_coding MGP_CBAJ_T0054525.1 MGP_CBAJ_G0025469.1 mouse_genomes_project 2 63487296 63524597 - MGP_CBAJ_P0054525 Wdsub1 protein_coding protein_coding MGP_CBAJ_T0054526.1 MGP_CBAJ_G0025469.1 mouse_genomes_project 2 63490113 63524560 - MGP_CBAJ_P0054526 Wdsub1 protein_coding protein_coding MGP_CBAJ_T0054527.1 MGP_CBAJ_G0025469.1 mouse_genomes_project 2 63496250 63497653 - Wdsub1 protein_coding processed_transcript MGP_CBAJ_T0054528.1 MGP_CBAJ_G0025469.1 mouse_genomes_project 2 63496259 63496607 - Wdsub1 protein_coding processed_transcript MGP_CBAJ_T0054529.1 MGP_CBAJ_G0025469.1 mouse_genomes_project 2 63496487 63518855 - MGP_CBAJ_P0054529 Wdsub1 protein_coding protein_coding MGP_CBAJ_T0054530.1 MGP_CBAJ_G0025469.1 mouse_genomes_project 2 63496614 63498488 - Wdsub1 protein_coding processed_transcript MGP_CBAJ_T0054531.1 MGP_CBAJ_G0025469.1 mouse_genomes_project 2 63497599 63524570 - Wdsub1 protein_coding processed_transcript MGP_CBAJ_T0054532.1 MGP_CBAJ_G0025469.1 mouse_genomes_project 2 63512341 63520177 - MGP_CBAJ_P0054532 Wdsub1 protein_coding protein_coding MGP_CBAJ_T0054533.1 MGP_CBAJ_G0025469.1 mouse_genomes_project 2 63515047 63520359 - Wdsub1 protein_coding processed_transcript MGP_CBAJ_T0054534.1 MGP_CBAJ_G0025469.1 mouse_genomes_project 2 63518679 63524599 - MGP_CBAJ_P0054534 Wdsub1 protein_coding protein_coding MGP_CBAJ_T0054535.1 MGP_CBAJ_G0025469.1 mouse_genomes_project 2 63518680 63524587 - MGP_CBAJ_P0054535 Wdsub1 protein_coding protein_coding MGP_CBAJ_T0054536.1 MGP_CBAJ_G0025469.1 mouse_genomes_project 2 63520344 63524604 - Wdsub1 protein_coding processed_transcript MGP_CBAJ_T0055452.1 MGP_CBAJ_G0025719.1 mouse_genomes_project 2 94590795 94593384 - MGP_CBAJ_P0055452 protein_coding protein_coding MGP_CBAJ_T0010322.1 MGP_CBAJ_G0008460.1 mouse_genomes_project 2 126401316 126401405 + Mir1951 miRNA miRNA MGP_CBAJ_T0004055.1 MGP_CBAJ_G0003584.1 mouse_genomes_project 2 168134048 168135661 - Gm14199 antisense antisense MGP_CBAJ_T0053920.1 MGP_CBAJ_G0025344.1 mouse_genomes_project 2 33917735 33949384 + MGP_CBAJ_P0053920 Angptl2 protein_coding protein_coding MGP_CBAJ_T0053921.1 MGP_CBAJ_G0025344.1 mouse_genomes_project 2 33917739 33946186 + Angptl2 protein_coding retained_intron MGP_CBAJ_T0053922.1 MGP_CBAJ_G0025344.1 mouse_genomes_project 2 33917764 33931791 + Angptl2 protein_coding retained_intron MGP_CBAJ_T0053923.1 MGP_CBAJ_G0025344.1 mouse_genomes_project 2 33917783 33944060 + MGP_CBAJ_P0053923 Angptl2 protein_coding protein_coding MGP_CBAJ_T0057315.1 MGP_CBAJ_G0026206.1 mouse_genomes_project 2 143275903 143277546 + Mrps26 protein_coding retained_intron MGP_CBAJ_T0057316.1 MGP_CBAJ_G0026206.1 mouse_genomes_project 2 143275903 143280631 + MGP_CBAJ_P0057316 Mrps26 protein_coding protein_coding MGP_CBAJ_T0052883.1 MGP_CBAJ_G0025183.1 mouse_genomes_project 2 25316012 25331544 - MGP_CBAJ_P0052883 Glt6d1 protein_coding protein_coding MGP_CBAJ_T0052884.1 MGP_CBAJ_G0025183.1 mouse_genomes_project 2 25317367 25331527 - Glt6d1 protein_coding processed_transcript MGP_CBAJ_T0013443.1 MGP_CBAJ_G0011555.1 mouse_genomes_project 2 86071808 86072631 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055367.1 MGP_CBAJ_G0025644.1 mouse_genomes_project 2 92286095 92287037 + MGP_CBAJ_P0055367 Olfr1008 protein_coding protein_coding MGP_CBAJ_T0007105.1 MGP_CBAJ_G0005821.1 mouse_genomes_project 2 58634241 58643782 + Gm14033 lincRNA lincRNA MGP_CBAJ_T0007106.1 MGP_CBAJ_G0005821.1 mouse_genomes_project 2 58634266 58655969 + Gm14033 lincRNA lincRNA MGP_CBAJ_T0013286.1 MGP_CBAJ_G0011398.1 mouse_genomes_project 2 23486300 23487784 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007218.1 MGP_CBAJ_G0005912.1 mouse_genomes_project 2 136727525 136729954 + Gm13994 lincRNA lincRNA MGP_CBAJ_T0054384.1 MGP_CBAJ_G0025441.1 mouse_genomes_project 2 54726159 54736576 - MGP_CBAJ_P0054384 Rbm43 protein_coding protein_coding MGP_CBAJ_T0054385.1 MGP_CBAJ_G0025441.1 mouse_genomes_project 2 54726159 54736732 - MGP_CBAJ_P0054385 Rbm43 protein_coding protein_coding MGP_CBAJ_T0054386.1 MGP_CBAJ_G0025441.1 mouse_genomes_project 2 54726162 54736213 - MGP_CBAJ_P0054386 Rbm43 protein_coding protein_coding MGP_CBAJ_T0054387.1 MGP_CBAJ_G0025441.1 mouse_genomes_project 2 54727093 54728723 - Rbm43 protein_coding processed_transcript MGP_CBAJ_T0054388.1 MGP_CBAJ_G0025441.1 mouse_genomes_project 2 54727358 54735028 - Rbm43 protein_coding processed_transcript MGP_CBAJ_T0054389.1 MGP_CBAJ_G0025441.1 mouse_genomes_project 2 54727577 54736243 - Rbm43 protein_coding processed_transcript MGP_CBAJ_T0001011.1 MGP_CBAJ_G0000943.1 mouse_genomes_project 2 12479692 12483166 + TEC TEC MGP_CBAJ_T0007036.1 MGP_CBAJ_G0005767.1 mouse_genomes_project 2 7358735 7370054 - lincRNA lincRNA MGP_CBAJ_T0003951.1 MGP_CBAJ_G0003512.1 mouse_genomes_project 2 83146882 83166066 + Gm13944 antisense antisense MGP_CBAJ_T0003952.1 MGP_CBAJ_G0003512.1 mouse_genomes_project 2 83146890 83166411 + Gm13944 antisense antisense MGP_CBAJ_T0013313.1 MGP_CBAJ_G0011425.1 mouse_genomes_project 2 37197447 37197812 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0051946.1 MGP_CBAJ_G0025018.1 mouse_genomes_project 2 328839 358155 - MGP_CBAJ_P0051946 Olah protein_coding protein_coding MGP_CBAJ_T0051947.1 MGP_CBAJ_G0025018.1 mouse_genomes_project 2 328844 388946 - MGP_CBAJ_P0051947 Olah protein_coding protein_coding MGP_CBAJ_T0051948.1 MGP_CBAJ_G0025018.1 mouse_genomes_project 2 328874 358133 - MGP_CBAJ_P0051948 Olah protein_coding protein_coding MGP_CBAJ_T0013259.1 MGP_CBAJ_G0011371.1 mouse_genomes_project 2 15632001 15633012 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0054652.1 MGP_CBAJ_G0025488.1 mouse_genomes_project 2 69142614 69145172 - Grb14 protein_coding processed_transcript MGP_CBAJ_T0054653.1 MGP_CBAJ_G0025488.1 mouse_genomes_project 2 69142614 69147468 - MGP_CBAJ_P0054653 Grb14 protein_coding protein_coding MGP_CBAJ_T0054654.1 MGP_CBAJ_G0025488.1 mouse_genomes_project 2 69142614 69257756 - MGP_CBAJ_P0054654 Grb14 protein_coding protein_coding MGP_CBAJ_T0054655.1 MGP_CBAJ_G0025488.1 mouse_genomes_project 2 69142614 69147393 - MGP_CBAJ_P0054655 Grb14 protein_coding protein_coding MGP_CBAJ_T0054656.1 MGP_CBAJ_G0025488.1 mouse_genomes_project 2 69159532 69165240 - Grb14 protein_coding processed_transcript MGP_CBAJ_T0054657.1 MGP_CBAJ_G0025488.1 mouse_genomes_project 2 69160998 69206224 - MGP_CBAJ_P0054657 Grb14 protein_coding protein_coding MGP_CBAJ_T0054658.1 MGP_CBAJ_G0025488.1 mouse_genomes_project 2 69167089 69206201 - Grb14 protein_coding processed_transcript MGP_CBAJ_T0054659.1 MGP_CBAJ_G0025488.1 mouse_genomes_project 2 69257641 69259830 - Grb14 protein_coding processed_transcript MGP_CBAJ_T0013661.1 MGP_CBAJ_G0011773.1 mouse_genomes_project 2 172630479 172630716 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098311.1 MGP_CBAJ_G0036578.1 mouse_genomes_project 2 62256721 62287340 + Gm13558 sense_intronic sense_intronic MGP_CBAJ_T0007114.1 MGP_CBAJ_G0005829.1 mouse_genomes_project 2 70429776 70490801 + Gm28638 lincRNA lincRNA MGP_CBAJ_T0056869.1 MGP_CBAJ_G0026095.1 mouse_genomes_project 2 132978127 133034157 + MGP_CBAJ_P0056869 Wdr76 protein_coding protein_coding MGP_CBAJ_T0056870.1 MGP_CBAJ_G0026095.1 mouse_genomes_project 2 132978187 133037479 + MGP_CBAJ_P0056870 Wdr76 protein_coding protein_coding MGP_CBAJ_T0056871.1 MGP_CBAJ_G0026095.1 mouse_genomes_project 2 132981293 133033762 + MGP_CBAJ_P0056871 Wdr76 protein_coding protein_coding MGP_CBAJ_T0013403.1 MGP_CBAJ_G0011515.1 mouse_genomes_project 2 71268930 71270444 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007146.1 MGP_CBAJ_G0005856.1 mouse_genomes_project 2 83796037 83819870 + lincRNA lincRNA MGP_CBAJ_T0007147.1 MGP_CBAJ_G0005856.1 mouse_genomes_project 2 83796083 83939685 + lincRNA lincRNA MGP_CBAJ_T0100361.1 MGP_CBAJ_G0038616.1 mouse_genomes_project 2 48563682 48563805 + Gm23072 snoRNA snoRNA MGP_CBAJ_T0056749.1 MGP_CBAJ_G0026075.1 mouse_genomes_project 2 132448996 132493993 - MGP_CBAJ_P0056749 Tgm5 protein_coding protein_coding MGP_CBAJ_T0056750.1 MGP_CBAJ_G0026075.1 mouse_genomes_project 2 132479405 132493974 - Tgm5 protein_coding retained_intron MGP_CBAJ_T0013278.1 MGP_CBAJ_G0011390.1 mouse_genomes_project 2 21684334 21684988 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001035.1 MGP_CBAJ_G0000967.1 mouse_genomes_project 2 39182273 39186223 - TEC TEC MGP_CBAJ_T0007191.1 MGP_CBAJ_G0005892.1 mouse_genomes_project 2 124826848 124828110 - Gm29234 lincRNA lincRNA MGP_CBAJ_T0004026.1 MGP_CBAJ_G0003561.1 mouse_genomes_project 2 148446965 148492975 - 4930545L23Rik antisense antisense MGP_CBAJ_T0051976.1 MGP_CBAJ_G0025023.1 mouse_genomes_project 2 522094 532872 + Cdnf protein_coding processed_transcript MGP_CBAJ_T0051977.1 MGP_CBAJ_G0025023.1 mouse_genomes_project 2 522129 535426 + MGP_CBAJ_P0051977 Cdnf protein_coding protein_coding MGP_CBAJ_T0051978.1 MGP_CBAJ_G0025023.1 mouse_genomes_project 2 522948 532950 + Cdnf protein_coding processed_transcript MGP_CBAJ_T0054863.1 MGP_CBAJ_G0025529.1 mouse_genomes_project 2 75875151 75978534 - MGP_CBAJ_P0054863 Mettl8 protein_coding protein_coding MGP_CBAJ_T0054864.1 MGP_CBAJ_G0025529.1 mouse_genomes_project 2 75875158 75978561 - MGP_CBAJ_P0054864 Mettl8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054865.1 MGP_CBAJ_G0025529.1 mouse_genomes_project 2 75875158 75978561 - MGP_CBAJ_P0054865 Mettl8 protein_coding protein_coding MGP_CBAJ_T0054866.1 MGP_CBAJ_G0025529.1 mouse_genomes_project 2 75875158 75978561 - MGP_CBAJ_P0054866 Mettl8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054867.1 MGP_CBAJ_G0025529.1 mouse_genomes_project 2 75876762 75883986 - MGP_CBAJ_P0054867 Mettl8 protein_coding protein_coding MGP_CBAJ_T0054868.1 MGP_CBAJ_G0025529.1 mouse_genomes_project 2 75877080 75897760 - MGP_CBAJ_P0054868 Mettl8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054869.1 MGP_CBAJ_G0025529.1 mouse_genomes_project 2 75877647 75889451 - Mettl8 protein_coding retained_intron MGP_CBAJ_T0054870.1 MGP_CBAJ_G0025529.1 mouse_genomes_project 2 75891715 75978550 - MGP_CBAJ_P0054870 Mettl8 protein_coding protein_coding MGP_CBAJ_T0054871.1 MGP_CBAJ_G0025529.1 mouse_genomes_project 2 75896634 75978561 - Mettl8 protein_coding retained_intron MGP_CBAJ_T0054872.1 MGP_CBAJ_G0025529.1 mouse_genomes_project 2 75908909 75939378 - Mettl8 protein_coding retained_intron MGP_CBAJ_T0098306.1 MGP_CBAJ_G0036573.1 mouse_genomes_project 2 1298294 1300558 + Gm38348 sense_intronic sense_intronic MGP_CBAJ_T0056849.1 MGP_CBAJ_G0026090.1 mouse_genomes_project 2 132890951 132898484 + MGP_CBAJ_P0056849 Serf2 protein_coding protein_coding MGP_CBAJ_T0056850.1 MGP_CBAJ_G0026090.1 mouse_genomes_project 2 132891124 132898069 + Serf2 protein_coding retained_intron MGP_CBAJ_T0056851.1 MGP_CBAJ_G0026090.1 mouse_genomes_project 2 132891134 132893066 + MGP_CBAJ_P0056851 Serf2 protein_coding protein_coding MGP_CBAJ_T0056852.1 MGP_CBAJ_G0026090.1 mouse_genomes_project 2 132891139 132892830 + MGP_CBAJ_P0056852 Serf2 protein_coding protein_coding MGP_CBAJ_T0056853.1 MGP_CBAJ_G0026090.1 mouse_genomes_project 2 132891168 132903408 + MGP_CBAJ_P0056853 Serf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056854.1 MGP_CBAJ_G0026090.1 mouse_genomes_project 2 132891168 132903406 + MGP_CBAJ_P0056854 Serf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0013455.1 MGP_CBAJ_G0011567.1 mouse_genomes_project 2 89790243 89790956 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0052648.1 MGP_CBAJ_G0025132.1 mouse_genomes_project 2 24504516 24514111 - MGP_CBAJ_P0052648 Noxa1 protein_coding protein_coding MGP_CBAJ_T0052649.1 MGP_CBAJ_G0025132.1 mouse_genomes_project 2 24504516 24514093 - MGP_CBAJ_P0052649 Noxa1 protein_coding protein_coding MGP_CBAJ_T0013304.1 MGP_CBAJ_G0011416.1 mouse_genomes_project 2 32998879 32999396 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007151.1 MGP_CBAJ_G0005859.1 mouse_genomes_project 2 88633655 88655777 - A130030D18Rik lincRNA lincRNA MGP_CBAJ_T0059330.1 MGP_CBAJ_G0026684.1 mouse_genomes_project 2 199159123 199174622 - MGP_CBAJ_P0059330 Cables2 protein_coding protein_coding MGP_CBAJ_T0059331.1 MGP_CBAJ_G0026684.1 mouse_genomes_project 2 199159131 199174589 - Cables2 protein_coding retained_intron MGP_CBAJ_T0059332.1 MGP_CBAJ_G0026684.1 mouse_genomes_project 2 199161526 199162891 - Cables2 protein_coding retained_intron MGP_CBAJ_T0059333.1 MGP_CBAJ_G0026684.1 mouse_genomes_project 2 199163257 199174622 - Cables2 protein_coding retained_intron MGP_CBAJ_T0059334.1 MGP_CBAJ_G0026684.1 mouse_genomes_project 2 199163980 199174572 - Cables2 protein_coding retained_intron MGP_CBAJ_T0056305.1 MGP_CBAJ_G0025984.1 mouse_genomes_project 2 122644363 122793678 + MGP_CBAJ_P0056305 Gm21985 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054484.1 MGP_CBAJ_G0025462.1 mouse_genomes_project 2 61997604 61998567 + MGP_CBAJ_P0054484 Gm17409 protein_coding protein_coding MGP_CBAJ_T0013502.1 MGP_CBAJ_G0011614.1 mouse_genomes_project 2 107290207 107290532 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0052411.1 MGP_CBAJ_G0025093.1 mouse_genomes_project 2 18324875 18340223 + Msrb2 protein_coding processed_transcript MGP_CBAJ_T0052412.1 MGP_CBAJ_G0025093.1 mouse_genomes_project 2 18325071 18353620 + MGP_CBAJ_P0052412 Msrb2 protein_coding protein_coding MGP_CBAJ_T0052413.1 MGP_CBAJ_G0025093.1 mouse_genomes_project 2 18325103 18351964 + Msrb2 protein_coding processed_transcript MGP_CBAJ_T0052414.1 MGP_CBAJ_G0025093.1 mouse_genomes_project 2 18325276 18352908 + Msrb2 protein_coding processed_transcript MGP_CBAJ_T0011383.1 MGP_CBAJ_G0009521.1 mouse_genomes_project 2 127868768 127869081 + Gm24914 misc_RNA misc_RNA MGP_CBAJ_T0013691.1 MGP_CBAJ_G0011803.1 mouse_genomes_project 2 192421561 192421771 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0059160.1 MGP_CBAJ_G0026639.1 mouse_genomes_project 2 190587207 190626263 + MGP_CBAJ_P0059160 Cass4 protein_coding protein_coding MGP_CBAJ_T0059161.1 MGP_CBAJ_G0026639.1 mouse_genomes_project 2 190587234 190632107 + MGP_CBAJ_P0059161 Cass4 protein_coding protein_coding MGP_CBAJ_T0059162.1 MGP_CBAJ_G0026639.1 mouse_genomes_project 2 190587313 190631210 + MGP_CBAJ_P0059162 Cass4 protein_coding protein_coding MGP_CBAJ_T0059163.1 MGP_CBAJ_G0026639.1 mouse_genomes_project 2 190587383 190630993 + MGP_CBAJ_P0059163 Cass4 protein_coding unknown_likely_coding MGP_CBAJ_T0011395.1 MGP_CBAJ_G0009533.1 mouse_genomes_project 2 183843253 183843600 + Gm25265 misc_RNA misc_RNA MGP_CBAJ_T0004036.1 MGP_CBAJ_G0003568.1 mouse_genomes_project 2 157792677 157828388 - Pcsk2os2 antisense antisense MGP_CBAJ_T0004037.1 MGP_CBAJ_G0003568.1 mouse_genomes_project 2 157794258 157835600 - Pcsk2os2 antisense antisense MGP_CBAJ_T0055040.1 MGP_CBAJ_G0025565.1 mouse_genomes_project 2 80085609 80103783 + Hoxd4 protein_coding processed_transcript MGP_CBAJ_T0055041.1 MGP_CBAJ_G0025565.1 mouse_genomes_project 2 80095655 80104075 + MGP_CBAJ_P0055041 Hoxd4 protein_coding protein_coding MGP_CBAJ_T0055043.1 MGP_CBAJ_G0025565.1 mouse_genomes_project 2 80100751 80104038 + MGP_CBAJ_P0055043 Hoxd4 protein_coding protein_coding MGP_CBAJ_T0055383.1 MGP_CBAJ_G0025659.1 mouse_genomes_project 2 92646313 92647324 + MGP_CBAJ_P0055383 Olfr1031 protein_coding protein_coding MGP_CBAJ_T0059056.1 MGP_CBAJ_G0026610.1 mouse_genomes_project 2 184876462 184882984 + MGP_CBAJ_P0059056 Snai1 protein_coding protein_coding MGP_CBAJ_T0013379.1 MGP_CBAJ_G0011491.1 mouse_genomes_project 2 62458434 62458763 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055471.1 MGP_CBAJ_G0025736.1 mouse_genomes_project 2 94938396 94939582 + MGP_CBAJ_P0055471 Olfr1148 protein_coding protein_coding MGP_CBAJ_T0057031.1 MGP_CBAJ_G0026137.1 mouse_genomes_project 2 138354578 138367940 + MGP_CBAJ_P0057031 Dtwd1 protein_coding protein_coding MGP_CBAJ_T0057032.1 MGP_CBAJ_G0026137.1 mouse_genomes_project 2 138356982 138367943 + MGP_CBAJ_P0057032 Dtwd1 protein_coding protein_coding MGP_CBAJ_T0017668.1 MGP_CBAJ_G0015239.1 mouse_genomes_project 2 191323513 191323966 - Gm20490 processed_transcript processed_transcript MGP_CBAJ_T0011373.1 MGP_CBAJ_G0009511.1 mouse_genomes_project 2 70983342 70983626 + Gm23046 misc_RNA misc_RNA MGP_CBAJ_T0054835.1 MGP_CBAJ_G0025523.1 mouse_genomes_project 2 75337328 75340096 + MGP_CBAJ_P0054835 Sp5 protein_coding protein_coding MGP_CBAJ_T0058768.1 MGP_CBAJ_G0026548.1 mouse_genomes_project 2 181175222 181178718 - MGP_CBAJ_P0058768 Trp53tg5 protein_coding protein_coding MGP_CBAJ_T0055513.1 MGP_CBAJ_G0025776.1 mouse_genomes_project 2 96438310 96449965 - MGP_CBAJ_P0055513 protein_coding protein_coding MGP_CBAJ_T0055514.1 MGP_CBAJ_G0025776.1 mouse_genomes_project 2 96438809 96449935 - protein_coding processed_transcript MGP_CBAJ_T0055515.1 MGP_CBAJ_G0025776.1 mouse_genomes_project 2 96439026 96449959 - protein_coding processed_transcript MGP_CBAJ_T0054004.1 MGP_CBAJ_G0025356.1 mouse_genomes_project 2 35791488 35799334 + Cutal protein_coding retained_intron MGP_CBAJ_T0054005.1 MGP_CBAJ_G0025356.1 mouse_genomes_project 2 35791555 35807210 + MGP_CBAJ_P0054005 Cutal protein_coding protein_coding MGP_CBAJ_T0053045.1 MGP_CBAJ_G0025208.1 mouse_genomes_project 2 26512893 26527153 - MGP_CBAJ_P0053045 Abo protein_coding protein_coding MGP_CBAJ_T0053046.1 MGP_CBAJ_G0025208.1 mouse_genomes_project 2 26512893 26536427 - MGP_CBAJ_P0053046 Abo protein_coding protein_coding MGP_CBAJ_T0004054.1 MGP_CBAJ_G0003583.1 mouse_genomes_project 2 167733766 167735205 - 1700030C14Rik antisense antisense MGP_CBAJ_T0011387.1 MGP_CBAJ_G0009525.1 mouse_genomes_project 2 156289329 156289633 + Gm23179 misc_RNA misc_RNA MGP_CBAJ_T0053114.1 MGP_CBAJ_G0025220.1 mouse_genomes_project 2 26780939 26793361 - MGP_CBAJ_P0053114 Tmem8c protein_coding protein_coding MGP_CBAJ_T0053115.1 MGP_CBAJ_G0025220.1 mouse_genomes_project 2 26780941 26789050 - MGP_CBAJ_P0053115 Tmem8c protein_coding protein_coding MGP_CBAJ_T0013616.1 MGP_CBAJ_G0011728.1 mouse_genomes_project 2 159884196 159884508 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007099.1 MGP_CBAJ_G0005816.1 mouse_genomes_project 2 53934914 53993252 + Gm13497 lincRNA lincRNA MGP_CBAJ_T0056292.1 MGP_CBAJ_G0025974.1 mouse_genomes_project 2 122292311 122293274 - MGP_CBAJ_P0056292 Olfr1309 protein_coding protein_coding MGP_CBAJ_T0057385.1 MGP_CBAJ_G0026220.1 mouse_genomes_project 2 143939897 143961488 + MGP_CBAJ_P0057385 Hspa12b protein_coding protein_coding MGP_CBAJ_T0057386.1 MGP_CBAJ_G0026220.1 mouse_genomes_project 2 143940059 143952518 + MGP_CBAJ_P0057386 Hspa12b protein_coding protein_coding MGP_CBAJ_T0057387.1 MGP_CBAJ_G0026220.1 mouse_genomes_project 2 143940111 143960394 + MGP_CBAJ_P0057387 Hspa12b protein_coding nonsense_mediated_decay MGP_CBAJ_T0003891.1 MGP_CBAJ_G0003471.1 mouse_genomes_project 2 39953314 39962922 + Nr5a1os antisense antisense MGP_CBAJ_T0013671.1 MGP_CBAJ_G0011783.1 mouse_genomes_project 2 177834526 177835002 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013659.1 MGP_CBAJ_G0011771.1 mouse_genomes_project 2 172570280 172582033 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004031.1 MGP_CBAJ_G0003565.1 mouse_genomes_project 2 155014788 155076570 - Macrod2os1 antisense antisense MGP_CBAJ_T0053187.1 MGP_CBAJ_G0025237.1 mouse_genomes_project 2 28398019 28434777 + MGP_CBAJ_P0053187 Ralgds protein_coding protein_coding MGP_CBAJ_T0053188.1 MGP_CBAJ_G0025237.1 mouse_genomes_project 2 28398220 28444908 + MGP_CBAJ_P0053188 Ralgds protein_coding protein_coding MGP_CBAJ_T0053189.1 MGP_CBAJ_G0025237.1 mouse_genomes_project 2 28421222 28444893 + MGP_CBAJ_P0053189 Ralgds protein_coding protein_coding MGP_CBAJ_T0053190.1 MGP_CBAJ_G0025237.1 mouse_genomes_project 2 28421409 28444463 + MGP_CBAJ_P0053190 Ralgds protein_coding protein_coding MGP_CBAJ_T0053191.1 MGP_CBAJ_G0025237.1 mouse_genomes_project 2 28421416 28444897 + Ralgds protein_coding retained_intron MGP_CBAJ_T0053192.1 MGP_CBAJ_G0025237.1 mouse_genomes_project 2 28432552 28434729 + Ralgds protein_coding retained_intron MGP_CBAJ_T0053193.1 MGP_CBAJ_G0025237.1 mouse_genomes_project 2 28434159 28436903 + MGP_CBAJ_P0053193 Ralgds protein_coding nonsense_mediated_decay MGP_CBAJ_T0053194.1 MGP_CBAJ_G0025237.1 mouse_genomes_project 2 28437119 28439047 + Ralgds protein_coding retained_intron MGP_CBAJ_T0053195.1 MGP_CBAJ_G0025237.1 mouse_genomes_project 2 28439376 28440803 + Ralgds protein_coding retained_intron MGP_CBAJ_T0053196.1 MGP_CBAJ_G0025237.1 mouse_genomes_project 2 28440884 28444152 + MGP_CBAJ_P0053196 Ralgds protein_coding protein_coding MGP_CBAJ_T0013555.1 MGP_CBAJ_G0011667.1 mouse_genomes_project 2 130735525 130736200 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057321.1 MGP_CBAJ_G0026210.1 mouse_genomes_project 2 143332899 143352502 - MGP_CBAJ_P0057321 Fastkd5 protein_coding protein_coding MGP_CBAJ_T0057322.1 MGP_CBAJ_G0026210.1 mouse_genomes_project 2 143333304 143335728 - MGP_CBAJ_P0057322 Fastkd5 protein_coding protein_coding MGP_CBAJ_T0055463.1 MGP_CBAJ_G0025729.1 mouse_genomes_project 2 94780555 94781488 - MGP_CBAJ_P0055463 Olfr1137 protein_coding protein_coding MGP_CBAJ_T0053177.1 MGP_CBAJ_G0025233.1 mouse_genomes_project 2 28351098 28354939 - 1700007K13Rik protein_coding processed_transcript MGP_CBAJ_T0053178.1 MGP_CBAJ_G0025233.1 mouse_genomes_project 2 28351098 28355419 - MGP_CBAJ_P0053178 1700007K13Rik protein_coding protein_coding MGP_CBAJ_T0053179.1 MGP_CBAJ_G0025233.1 mouse_genomes_project 2 28351445 28355403 - MGP_CBAJ_P0053179 1700007K13Rik protein_coding protein_coding MGP_CBAJ_T0056227.1 MGP_CBAJ_G0025938.1 mouse_genomes_project 2 119682135 119733922 + MGP_CBAJ_P0056227 Bdnf protein_coding protein_coding MGP_CBAJ_T0056228.1 MGP_CBAJ_G0025938.1 mouse_genomes_project 2 119683332 119733922 + MGP_CBAJ_P0056228 Bdnf protein_coding protein_coding MGP_CBAJ_T0056229.1 MGP_CBAJ_G0025938.1 mouse_genomes_project 2 119683332 119733922 + MGP_CBAJ_P0056229 Bdnf protein_coding protein_coding MGP_CBAJ_T0056230.1 MGP_CBAJ_G0025938.1 mouse_genomes_project 2 119683332 119733922 + MGP_CBAJ_P0056230 Bdnf protein_coding protein_coding MGP_CBAJ_T0056231.1 MGP_CBAJ_G0025938.1 mouse_genomes_project 2 119684467 119733922 + MGP_CBAJ_P0056231 Bdnf protein_coding protein_coding MGP_CBAJ_T0056232.1 MGP_CBAJ_G0025938.1 mouse_genomes_project 2 119699902 119733922 + MGP_CBAJ_P0056232 Bdnf protein_coding protein_coding MGP_CBAJ_T0056233.1 MGP_CBAJ_G0025938.1 mouse_genomes_project 2 119700496 119733922 + MGP_CBAJ_P0056233 Bdnf protein_coding protein_coding MGP_CBAJ_T0056234.1 MGP_CBAJ_G0025938.1 mouse_genomes_project 2 119701032 119733922 + MGP_CBAJ_P0056234 Bdnf protein_coding protein_coding MGP_CBAJ_T0056235.1 MGP_CBAJ_G0025938.1 mouse_genomes_project 2 119701878 119733922 + MGP_CBAJ_P0056235 Bdnf protein_coding protein_coding MGP_CBAJ_T0056236.1 MGP_CBAJ_G0025938.1 mouse_genomes_project 2 119701938 119733922 + MGP_CBAJ_P0056236 Bdnf protein_coding protein_coding MGP_CBAJ_T0056237.1 MGP_CBAJ_G0025938.1 mouse_genomes_project 2 119716365 119733922 + MGP_CBAJ_P0056237 Bdnf protein_coding protein_coding MGP_CBAJ_T0055361.1 MGP_CBAJ_G0025638.1 mouse_genomes_project 2 91966306 91967251 - MGP_CBAJ_P0055361 Olfr993 protein_coding protein_coding MGP_CBAJ_T0051968.1 MGP_CBAJ_G0025022.1 mouse_genomes_project 2 489589 521879 - MGP_CBAJ_P0051968 protein_coding protein_coding MGP_CBAJ_T0051969.1 MGP_CBAJ_G0025022.1 mouse_genomes_project 2 489715 490902 - protein_coding retained_intron MGP_CBAJ_T0051970.1 MGP_CBAJ_G0025022.1 mouse_genomes_project 2 491697 496415 - protein_coding retained_intron MGP_CBAJ_T0051971.1 MGP_CBAJ_G0025022.1 mouse_genomes_project 2 500022 502112 - protein_coding retained_intron MGP_CBAJ_T0051972.1 MGP_CBAJ_G0025022.1 mouse_genomes_project 2 504508 507010 - protein_coding retained_intron MGP_CBAJ_T0051973.1 MGP_CBAJ_G0025022.1 mouse_genomes_project 2 511404 521822 - MGP_CBAJ_P0051973 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051974.1 MGP_CBAJ_G0025022.1 mouse_genomes_project 2 513286 521855 - MGP_CBAJ_P0051974 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051975.1 MGP_CBAJ_G0025022.1 mouse_genomes_project 2 519952 521808 - protein_coding retained_intron MGP_CBAJ_T0052130.1 MGP_CBAJ_G0025048.1 mouse_genomes_project 2 7744443 7773960 - Taf3 protein_coding processed_transcript MGP_CBAJ_T0052131.1 MGP_CBAJ_G0025048.1 mouse_genomes_project 2 7745228 7747987 - MGP_CBAJ_P0052131 Taf3 protein_coding protein_coding MGP_CBAJ_T0052132.1 MGP_CBAJ_G0025048.1 mouse_genomes_project 2 7745230 7747561 - MGP_CBAJ_P0052132 Taf3 protein_coding protein_coding MGP_CBAJ_T0052133.1 MGP_CBAJ_G0025048.1 mouse_genomes_project 2 7745501 7896708 - MGP_CBAJ_P0052133 Taf3 protein_coding protein_coding MGP_CBAJ_T0059020.1 MGP_CBAJ_G0026603.1 mouse_genomes_project 2 184303198 184307893 + protein_coding antisense MGP_CBAJ_T0059021.1 MGP_CBAJ_G0026603.1 mouse_genomes_project 2 184303198 184307892 + MGP_CBAJ_P0059021 protein_coding protein_coding MGP_CBAJ_T0059022.1 MGP_CBAJ_G0026603.1 mouse_genomes_project 2 184303199 184307605 + protein_coding retained_intron MGP_CBAJ_T0059023.1 MGP_CBAJ_G0026603.1 mouse_genomes_project 2 184303485 184307413 + protein_coding retained_intron MGP_CBAJ_T0059024.1 MGP_CBAJ_G0026603.1 mouse_genomes_project 2 184303487 184307753 + protein_coding retained_intron MGP_CBAJ_T0059025.1 MGP_CBAJ_G0026603.1 mouse_genomes_project 2 184303913 184307893 + protein_coding retained_intron MGP_CBAJ_T0056779.1 MGP_CBAJ_G0026081.1 mouse_genomes_project 2 132615480 132634084 - Trp53bp1 protein_coding processed_transcript MGP_CBAJ_T0056780.1 MGP_CBAJ_G0026081.1 mouse_genomes_project 2 132617038 132691221 - MGP_CBAJ_P0056780 Trp53bp1 protein_coding protein_coding MGP_CBAJ_T0056781.1 MGP_CBAJ_G0026081.1 mouse_genomes_project 2 132617038 132691155 - MGP_CBAJ_P0056781 Trp53bp1 protein_coding protein_coding MGP_CBAJ_T0056782.1 MGP_CBAJ_G0026081.1 mouse_genomes_project 2 132620446 132657814 - MGP_CBAJ_P0056782 Trp53bp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056783.1 MGP_CBAJ_G0026081.1 mouse_genomes_project 2 132621834 132627103 - Trp53bp1 protein_coding processed_transcript MGP_CBAJ_T0056784.1 MGP_CBAJ_G0026081.1 mouse_genomes_project 2 132624822 132629869 - MGP_CBAJ_P0056784 Trp53bp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056785.1 MGP_CBAJ_G0026081.1 mouse_genomes_project 2 132627202 132630685 - Trp53bp1 protein_coding processed_transcript MGP_CBAJ_T0056786.1 MGP_CBAJ_G0026081.1 mouse_genomes_project 2 132630530 132643308 - MGP_CBAJ_P0056786 Trp53bp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056787.1 MGP_CBAJ_G0026081.1 mouse_genomes_project 2 132630955 132643299 - Trp53bp1 protein_coding retained_intron MGP_CBAJ_T0056788.1 MGP_CBAJ_G0026081.1 mouse_genomes_project 2 132633410 132640518 - Trp53bp1 protein_coding processed_transcript MGP_CBAJ_T0056789.1 MGP_CBAJ_G0026081.1 mouse_genomes_project 2 132638005 132643446 - Trp53bp1 protein_coding retained_intron MGP_CBAJ_T0056790.1 MGP_CBAJ_G0026081.1 mouse_genomes_project 2 132638241 132691135 - MGP_CBAJ_P0056790 Trp53bp1 protein_coding protein_coding MGP_CBAJ_T0056791.1 MGP_CBAJ_G0026081.1 mouse_genomes_project 2 132650228 132657497 - MGP_CBAJ_P0056791 Trp53bp1 protein_coding protein_coding MGP_CBAJ_T0056792.1 MGP_CBAJ_G0026081.1 mouse_genomes_project 2 132653899 132657629 - Trp53bp1 protein_coding processed_transcript MGP_CBAJ_T0056793.1 MGP_CBAJ_G0026081.1 mouse_genomes_project 2 132658631 132673636 - MGP_CBAJ_P0056793 Trp53bp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056794.1 MGP_CBAJ_G0026081.1 mouse_genomes_project 2 132678303 132691183 - Trp53bp1 protein_coding processed_transcript MGP_CBAJ_T0056795.1 MGP_CBAJ_G0026081.1 mouse_genomes_project 2 132680455 132690100 - Trp53bp1 protein_coding retained_intron MGP_CBAJ_T0056796.1 MGP_CBAJ_G0026081.1 mouse_genomes_project 2 132687126 132691175 - Trp53bp1 protein_coding retained_intron MGP_CBAJ_T0056797.1 MGP_CBAJ_G0026081.1 mouse_genomes_project 2 132689443 132691184 - Trp53bp1 protein_coding retained_intron MGP_CBAJ_T0057137.1 MGP_CBAJ_G0026160.1 mouse_genomes_project 2 139837087 139913527 - MGP_CBAJ_P0057137 Kcnip3 protein_coding protein_coding MGP_CBAJ_T0057138.1 MGP_CBAJ_G0026160.1 mouse_genomes_project 2 139837087 139913527 - MGP_CBAJ_P0057138 Kcnip3 protein_coding protein_coding MGP_CBAJ_T0057139.1 MGP_CBAJ_G0026160.1 mouse_genomes_project 2 139838715 139871230 - MGP_CBAJ_P0057139 Kcnip3 protein_coding protein_coding MGP_CBAJ_T0057140.1 MGP_CBAJ_G0026160.1 mouse_genomes_project 2 139838797 139914251 - Kcnip3 protein_coding processed_transcript MGP_CBAJ_T0058384.1 MGP_CBAJ_G0026458.1 mouse_genomes_project 2 171948194 172013837 + MGP_CBAJ_P0058384 Cnbd2 protein_coding protein_coding MGP_CBAJ_T0058385.1 MGP_CBAJ_G0026458.1 mouse_genomes_project 2 171948473 171981732 + Cnbd2 protein_coding processed_transcript MGP_CBAJ_T0058386.1 MGP_CBAJ_G0026458.1 mouse_genomes_project 2 171948512 171959338 + Cnbd2 protein_coding retained_intron MGP_CBAJ_T0058387.1 MGP_CBAJ_G0026458.1 mouse_genomes_project 2 171948528 172013840 + MGP_CBAJ_P0058387 Cnbd2 protein_coding protein_coding MGP_CBAJ_T0058388.1 MGP_CBAJ_G0026458.1 mouse_genomes_project 2 171976952 171982334 + Cnbd2 protein_coding processed_transcript MGP_CBAJ_T0013319.1 MGP_CBAJ_G0011431.1 mouse_genomes_project 2 38804384 38804760 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007089.1 MGP_CBAJ_G0005807.1 mouse_genomes_project 2 47498400 47549030 + Gm13479 lincRNA lincRNA MGP_CBAJ_T0057141.1 MGP_CBAJ_G0026161.1 mouse_genomes_project 2 139918648 139936023 - MGP_CBAJ_P0057141 Prom2 protein_coding protein_coding MGP_CBAJ_T0057142.1 MGP_CBAJ_G0026161.1 mouse_genomes_project 2 139919130 139935941 - MGP_CBAJ_P0057142 Prom2 protein_coding protein_coding MGP_CBAJ_T0057143.1 MGP_CBAJ_G0026161.1 mouse_genomes_project 2 139929326 139929758 - Prom2 protein_coding processed_transcript MGP_CBAJ_T0057144.1 MGP_CBAJ_G0026161.1 mouse_genomes_project 2 139934793 139935970 - Prom2 protein_coding retained_intron MGP_CBAJ_T0013296.1 MGP_CBAJ_G0011408.1 mouse_genomes_project 2 28709057 28709277 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007337.1 MGP_CBAJ_G0006012.1 mouse_genomes_project 2 199806461 199808233 + Gm14339 lincRNA lincRNA MGP_CBAJ_T0013272.1 MGP_CBAJ_G0011384.1 mouse_genomes_project 2 18634355 18634460 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001053.1 MGP_CBAJ_G0000985.1 mouse_genomes_project 2 80798945 80799539 - TEC TEC MGP_CBAJ_T0055436.1 MGP_CBAJ_G0025711.1 mouse_genomes_project 2 94311001 94311691 + MGP_CBAJ_P0055436 protein_coding protein_coding MGP_CBAJ_T0099089.1 MGP_CBAJ_G0037344.1 mouse_genomes_project 2 16971024 16971129 + Gm25147 snRNA snRNA MGP_CBAJ_T0101831.1 MGP_CBAJ_G0039862.1 mouse_genomes_project 2 163536699 163540672 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013308.1 MGP_CBAJ_G0011420.1 mouse_genomes_project 2 35314509 35314765 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100373.1 MGP_CBAJ_G0038628.1 mouse_genomes_project 2 77061157 77061284 - Gm26408 snoRNA snoRNA MGP_CBAJ_T0007309.1 MGP_CBAJ_G0005987.1 mouse_genomes_project 2 186653823 186654631 - Gm14260 lincRNA lincRNA MGP_CBAJ_T0099111.1 MGP_CBAJ_G0037366.1 mouse_genomes_project 2 81174345 81174444 - Gm24996 snRNA snRNA MGP_CBAJ_T0055583.1 MGP_CBAJ_G0025826.1 mouse_genomes_project 2 98007631 98010618 + MGP_CBAJ_P0055583 protein_coding protein_coding MGP_CBAJ_T0055585.1 MGP_CBAJ_G0025826.1 mouse_genomes_project 2 98009581 98010604 + MGP_CBAJ_P0055585 protein_coding protein_coding MGP_CBAJ_T0011392.1 MGP_CBAJ_G0009530.1 mouse_genomes_project 2 172588695 172588941 + Gm27651 misc_RNA misc_RNA MGP_CBAJ_T0013333.1 MGP_CBAJ_G0011445.1 mouse_genomes_project 2 41623540 41623907 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0059026.1 MGP_CBAJ_G0026604.1 mouse_genomes_project 2 184353987 184444795 - MGP_CBAJ_P0059026 Kcnb1 protein_coding protein_coding MGP_CBAJ_T0010259.1 MGP_CBAJ_G0008397.1 mouse_genomes_project 2 26064043 26064104 - Mir6996 miRNA miRNA MGP_CBAJ_T0055477.1 MGP_CBAJ_G0025742.1 mouse_genomes_project 2 95049724 95050697 - MGP_CBAJ_P0055477 Olfr1156 protein_coding protein_coding MGP_CBAJ_T0007316.1 MGP_CBAJ_G0005993.1 mouse_genomes_project 2 187238517 187264765 + Gm14249 lincRNA lincRNA MGP_CBAJ_T0058118.1 MGP_CBAJ_G0026414.1 mouse_genomes_project 2 169930112 169940499 - MGP_CBAJ_P0058118 E2f1 protein_coding protein_coding MGP_CBAJ_T0058119.1 MGP_CBAJ_G0026414.1 mouse_genomes_project 2 169930339 169940327 - MGP_CBAJ_P0058119 E2f1 protein_coding protein_coding MGP_CBAJ_T0010231.1 MGP_CBAJ_G0008369.1 mouse_genomes_project 2 8387700 8387803 + Gm22239 miRNA miRNA MGP_CBAJ_T0052418.1 MGP_CBAJ_G0025096.1 mouse_genomes_project 2 18639863 18642695 + MGP_CBAJ_P0052418 Otud1 protein_coding protein_coding MGP_CBAJ_T0007332.1 MGP_CBAJ_G0006007.1 mouse_genomes_project 2 198196228 198198171 + 4930591A17Rik lincRNA lincRNA MGP_CBAJ_T0052654.1 MGP_CBAJ_G0025135.1 mouse_genomes_project 2 24632750 24644528 - MGP_CBAJ_P0052654 Nelfb protein_coding protein_coding MGP_CBAJ_T0052655.1 MGP_CBAJ_G0025135.1 mouse_genomes_project 2 24632751 24644528 - MGP_CBAJ_P0052655 Nelfb protein_coding protein_coding MGP_CBAJ_T0052656.1 MGP_CBAJ_G0025135.1 mouse_genomes_project 2 24632754 24644420 - Nelfb protein_coding retained_intron MGP_CBAJ_T0052657.1 MGP_CBAJ_G0025135.1 mouse_genomes_project 2 24633076 24636832 - Nelfb protein_coding retained_intron MGP_CBAJ_T0052658.1 MGP_CBAJ_G0025135.1 mouse_genomes_project 2 24633723 24636960 - MGP_CBAJ_P0052658 Nelfb protein_coding protein_coding MGP_CBAJ_T0052659.1 MGP_CBAJ_G0025135.1 mouse_genomes_project 2 24634192 24636640 - Nelfb protein_coding retained_intron MGP_CBAJ_T0052660.1 MGP_CBAJ_G0025135.1 mouse_genomes_project 2 24636929 24643765 - MGP_CBAJ_P0052660 Nelfb protein_coding protein_coding MGP_CBAJ_T0052661.1 MGP_CBAJ_G0025135.1 mouse_genomes_project 2 24636989 24643113 - Nelfb protein_coding processed_transcript MGP_CBAJ_T0052662.1 MGP_CBAJ_G0025135.1 mouse_genomes_project 2 24638205 24643739 - Nelfb protein_coding retained_intron MGP_CBAJ_T0059171.1 MGP_CBAJ_G0026644.1 mouse_genomes_project 2 191162540 191240987 - MGP_CBAJ_P0059171 Bmp7 protein_coding protein_coding MGP_CBAJ_T0059172.1 MGP_CBAJ_G0026644.1 mouse_genomes_project 2 191211460 191240758 - Bmp7 protein_coding retained_intron MGP_CBAJ_T0099132.1 MGP_CBAJ_G0037387.1 mouse_genomes_project 2 146395630 146395689 + Gm27449 snRNA snRNA MGP_CBAJ_T0052304.1 MGP_CBAJ_G0025074.1 mouse_genomes_project 2 12578323 12706116 + MGP_CBAJ_P0052304 Mrc1 protein_coding protein_coding MGP_CBAJ_T0052305.1 MGP_CBAJ_G0025074.1 mouse_genomes_project 2 12702619 12705986 + Mrc1 protein_coding retained_intron MGP_CBAJ_T0055948.1 MGP_CBAJ_G0025881.1 mouse_genomes_project 2 102175006 102215781 - MGP_CBAJ_P0055948 Gm27027 protein_coding protein_coding MGP_CBAJ_T0013288.1 MGP_CBAJ_G0011400.1 mouse_genomes_project 2 23932032 23933644 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055871.1 MGP_CBAJ_G0025866.1 mouse_genomes_project 2 100415604 100424660 - MGP_CBAJ_P0055871 Mapk8ip1 protein_coding protein_coding MGP_CBAJ_T0055872.1 MGP_CBAJ_G0025866.1 mouse_genomes_project 2 100415608 100433353 - MGP_CBAJ_P0055872 Mapk8ip1 protein_coding protein_coding MGP_CBAJ_T0055873.1 MGP_CBAJ_G0025866.1 mouse_genomes_project 2 100421830 100424661 - Mapk8ip1 protein_coding processed_transcript MGP_CBAJ_T0100345.1 MGP_CBAJ_G0038600.1 mouse_genomes_project 2 26249620 26249747 - Snora43 snoRNA snoRNA MGP_CBAJ_T0007224.1 MGP_CBAJ_G0005918.1 mouse_genomes_project 2 141808243 141824618 + A730036I17Rik lincRNA lincRNA MGP_CBAJ_T0007225.1 MGP_CBAJ_G0005918.1 mouse_genomes_project 2 141808302 141822287 + A730036I17Rik lincRNA lincRNA MGP_CBAJ_T0007226.1 MGP_CBAJ_G0005918.1 mouse_genomes_project 2 141817057 141821004 + A730036I17Rik lincRNA lincRNA MGP_CBAJ_T0007266.1 MGP_CBAJ_G0005950.1 mouse_genomes_project 2 170581414 170583704 - 2310005A03Rik lincRNA lincRNA MGP_CBAJ_T0013540.1 MGP_CBAJ_G0011652.1 mouse_genomes_project 2 121850118 121851057 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057816.1 MGP_CBAJ_G0026327.1 mouse_genomes_project 2 165451499 165506473 - MGP_CBAJ_P0057816 Acss1 protein_coding protein_coding MGP_CBAJ_T0057817.1 MGP_CBAJ_G0026327.1 mouse_genomes_project 2 165461894 165473126 - Acss1 protein_coding processed_transcript MGP_CBAJ_T0057818.1 MGP_CBAJ_G0026327.1 mouse_genomes_project 2 165461974 165473124 - Acss1 protein_coding processed_transcript MGP_CBAJ_T0057819.1 MGP_CBAJ_G0026327.1 mouse_genomes_project 2 165472990 165506715 - Acss1 protein_coding processed_transcript MGP_CBAJ_T0057820.1 MGP_CBAJ_G0026327.1 mouse_genomes_project 2 165497748 165506429 - Acss1 protein_coding retained_intron MGP_CBAJ_T0010299.1 MGP_CBAJ_G0008437.1 mouse_genomes_project 2 81909187 81909301 + Gm44337 miRNA miRNA MGP_CBAJ_T0055420.1 MGP_CBAJ_G0025695.1 mouse_genomes_project 2 93869746 93870685 - MGP_CBAJ_P0055420 Olfr1099 protein_coding protein_coding MGP_CBAJ_T0001030.1 MGP_CBAJ_G0000962.1 mouse_genomes_project 2 36401274 36402265 - TEC TEC MGP_CBAJ_T0051955.1 MGP_CBAJ_G0025020.1 mouse_genomes_project 2 415863 458490 + MGP_CBAJ_P0051955 Dclre1c protein_coding protein_coding MGP_CBAJ_T0051956.1 MGP_CBAJ_G0025020.1 mouse_genomes_project 2 415863 462013 + MGP_CBAJ_P0051956 Dclre1c protein_coding protein_coding MGP_CBAJ_T0051957.1 MGP_CBAJ_G0025020.1 mouse_genomes_project 2 415882 433764 + Dclre1c protein_coding processed_transcript MGP_CBAJ_T0051958.1 MGP_CBAJ_G0025020.1 mouse_genomes_project 2 415882 451470 + MGP_CBAJ_P0051958 Dclre1c protein_coding protein_coding MGP_CBAJ_T0051959.1 MGP_CBAJ_G0025020.1 mouse_genomes_project 2 415897 433802 + Dclre1c protein_coding processed_transcript MGP_CBAJ_T0051960.1 MGP_CBAJ_G0025020.1 mouse_genomes_project 2 415897 458482 + MGP_CBAJ_P0051960 Dclre1c protein_coding protein_coding MGP_CBAJ_T0051961.1 MGP_CBAJ_G0025020.1 mouse_genomes_project 2 415934 439584 + Dclre1c protein_coding retained_intron MGP_CBAJ_T0051962.1 MGP_CBAJ_G0025020.1 mouse_genomes_project 2 438206 456300 + MGP_CBAJ_P0051962 Dclre1c protein_coding protein_coding MGP_CBAJ_T0051963.1 MGP_CBAJ_G0025020.1 mouse_genomes_project 2 450326 451245 + Dclre1c protein_coding processed_transcript MGP_CBAJ_T0057620.1 MGP_CBAJ_G0026271.1 mouse_genomes_project 2 154383142 154404449 - Flrt3 protein_coding processed_transcript MGP_CBAJ_T0057621.1 MGP_CBAJ_G0026271.1 mouse_genomes_project 2 154391016 154404468 - MGP_CBAJ_P0057621 Flrt3 protein_coding protein_coding MGP_CBAJ_T0057622.1 MGP_CBAJ_G0026271.1 mouse_genomes_project 2 154392141 154404399 - MGP_CBAJ_P0057622 Flrt3 protein_coding protein_coding MGP_CBAJ_T0101772.1 MGP_CBAJ_G0039803.1 mouse_genomes_project 2 20164790 20280926 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010278.1 MGP_CBAJ_G0008416.1 mouse_genomes_project 2 33335454 33335591 - Mir8093 miRNA miRNA MGP_CBAJ_T0003889.1 MGP_CBAJ_G0003469.1 mouse_genomes_project 2 39562759 39563719 - Gm27197 antisense antisense MGP_CBAJ_T0007054.1 MGP_CBAJ_G0005782.1 mouse_genomes_project 2 24541735 24564655 - Gm13387 lincRNA lincRNA MGP_CBAJ_T0007055.1 MGP_CBAJ_G0005782.1 mouse_genomes_project 2 24560889 24564655 - Gm13387 lincRNA lincRNA MGP_CBAJ_T0007056.1 MGP_CBAJ_G0005782.1 mouse_genomes_project 2 24563075 24564582 - Gm13387 lincRNA lincRNA MGP_CBAJ_T0055525.1 MGP_CBAJ_G0025785.1 mouse_genomes_project 2 96670102 96671038 - MGP_CBAJ_P0055525 Olfr1224-ps1 protein_coding protein_coding MGP_CBAJ_T0057516.1 MGP_CBAJ_G0026247.1 mouse_genomes_project 2 145902031 145922197 + MGP_CBAJ_P0057516 Crls1 protein_coding protein_coding MGP_CBAJ_T0057517.1 MGP_CBAJ_G0026247.1 mouse_genomes_project 2 145902041 145919553 + MGP_CBAJ_P0057517 Crls1 protein_coding protein_coding MGP_CBAJ_T0057518.1 MGP_CBAJ_G0026247.1 mouse_genomes_project 2 145902053 145922197 + MGP_CBAJ_P0057518 Crls1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057519.1 MGP_CBAJ_G0026247.1 mouse_genomes_project 2 145903099 145921854 + MGP_CBAJ_P0057519 Crls1 protein_coding protein_coding MGP_CBAJ_T0057520.1 MGP_CBAJ_G0026247.1 mouse_genomes_project 2 145903103 145921305 + MGP_CBAJ_P0057520 Crls1 protein_coding protein_coding MGP_CBAJ_T0099107.1 MGP_CBAJ_G0037362.1 mouse_genomes_project 2 67488978 67489085 - Gm23503 snRNA snRNA MGP_CBAJ_T0099142.1 MGP_CBAJ_G0037397.1 mouse_genomes_project 2 180085823 180085926 + Gm25881 snRNA snRNA MGP_CBAJ_T0013635.1 MGP_CBAJ_G0011747.1 mouse_genomes_project 2 165799876 165800359 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057783.1 MGP_CBAJ_G0026312.1 mouse_genomes_project 2 163351857 163356995 - MGP_CBAJ_P0057783 Cst11 protein_coding protein_coding MGP_CBAJ_T0000998.1 MGP_CBAJ_G0000930.1 mouse_genomes_project 2 9745547 9745968 + TEC TEC MGP_CBAJ_T0055358.1 MGP_CBAJ_G0025635.1 mouse_genomes_project 2 91886726 91898016 - MGP_CBAJ_P0055358 protein_coding protein_coding MGP_CBAJ_T0010356.1 MGP_CBAJ_G0008494.1 mouse_genomes_project 2 185539651 185539729 - Gm24327 miRNA miRNA MGP_CBAJ_T0059502.1 MGP_CBAJ_G0026717.1 mouse_genomes_project 2 200414918 200493357 - MGP_CBAJ_P0059502 Zbtb46 protein_coding protein_coding MGP_CBAJ_T0059503.1 MGP_CBAJ_G0026717.1 mouse_genomes_project 2 200418042 200453365 - MGP_CBAJ_P0059503 Zbtb46 protein_coding protein_coding MGP_CBAJ_T0059504.1 MGP_CBAJ_G0026717.1 mouse_genomes_project 2 200438110 200493357 - MGP_CBAJ_P0059504 Zbtb46 protein_coding protein_coding MGP_CBAJ_T0059505.1 MGP_CBAJ_G0026717.1 mouse_genomes_project 2 200450530 200493357 - Zbtb46 protein_coding retained_intron MGP_CBAJ_T0059506.1 MGP_CBAJ_G0026717.1 mouse_genomes_project 2 200453204 200493310 - MGP_CBAJ_P0059506 Zbtb46 protein_coding protein_coding MGP_CBAJ_T0053666.1 MGP_CBAJ_G0025308.1 mouse_genomes_project 2 32626986 32652019 + MGP_CBAJ_P0053666 Plpp7 protein_coding protein_coding MGP_CBAJ_T0053667.1 MGP_CBAJ_G0025308.1 mouse_genomes_project 2 32627023 32651325 + MGP_CBAJ_P0053667 Plpp7 protein_coding protein_coding MGP_CBAJ_T0053668.1 MGP_CBAJ_G0025308.1 mouse_genomes_project 2 32627613 32652007 + MGP_CBAJ_P0053668 Plpp7 protein_coding protein_coding MGP_CBAJ_T0052056.1 MGP_CBAJ_G0025036.1 mouse_genomes_project 2 3189050 3217835 + MGP_CBAJ_P0052056 Nudt5 protein_coding protein_coding MGP_CBAJ_T0052057.1 MGP_CBAJ_G0025036.1 mouse_genomes_project 2 3189065 3213105 + MGP_CBAJ_P0052057 Nudt5 protein_coding protein_coding MGP_CBAJ_T0052058.1 MGP_CBAJ_G0025036.1 mouse_genomes_project 2 3189284 3201833 + Nudt5 protein_coding retained_intron MGP_CBAJ_T0052059.1 MGP_CBAJ_G0025036.1 mouse_genomes_project 2 3189284 3208861 + MGP_CBAJ_P0052059 Nudt5 protein_coding protein_coding MGP_CBAJ_T0052060.1 MGP_CBAJ_G0025036.1 mouse_genomes_project 2 3189321 3206801 + MGP_CBAJ_P0052060 Nudt5 protein_coding protein_coding MGP_CBAJ_T0052061.1 MGP_CBAJ_G0025036.1 mouse_genomes_project 2 3192160 3205648 + Nudt5 protein_coding processed_transcript MGP_CBAJ_T0054923.1 MGP_CBAJ_G0025540.1 mouse_genomes_project 2 76922680 76960408 + MGP_CBAJ_P0054923 Pdk1 protein_coding protein_coding MGP_CBAJ_T0054924.1 MGP_CBAJ_G0025540.1 mouse_genomes_project 2 76922776 76937332 + Pdk1 protein_coding processed_transcript MGP_CBAJ_T0054925.1 MGP_CBAJ_G0025540.1 mouse_genomes_project 2 76922782 76939712 + Pdk1 protein_coding processed_transcript MGP_CBAJ_T0054926.1 MGP_CBAJ_G0025540.1 mouse_genomes_project 2 76922802 76958536 + Pdk1 protein_coding processed_transcript MGP_CBAJ_T0054927.1 MGP_CBAJ_G0025540.1 mouse_genomes_project 2 76923007 76937584 + Pdk1 protein_coding processed_transcript MGP_CBAJ_T0054928.1 MGP_CBAJ_G0025540.1 mouse_genomes_project 2 76923199 76942352 + Pdk1 protein_coding processed_transcript MGP_CBAJ_T0054929.1 MGP_CBAJ_G0025540.1 mouse_genomes_project 2 76924535 76937007 + Pdk1 protein_coding processed_transcript MGP_CBAJ_T0054930.1 MGP_CBAJ_G0025540.1 mouse_genomes_project 2 76940817 76949883 + Pdk1 protein_coding processed_transcript MGP_CBAJ_T0017589.1 MGP_CBAJ_G0015202.1 mouse_genomes_project 2 129345208 129370942 - Gm29232 processed_transcript processed_transcript MGP_CBAJ_T0058201.1 MGP_CBAJ_G0026432.1 mouse_genomes_project 2 171090904 171130467 - MGP_CBAJ_P0058201 Gss protein_coding protein_coding MGP_CBAJ_T0058202.1 MGP_CBAJ_G0026432.1 mouse_genomes_project 2 171090912 171130371 - MGP_CBAJ_P0058202 Gss protein_coding protein_coding MGP_CBAJ_T0058203.1 MGP_CBAJ_G0026432.1 mouse_genomes_project 2 171091212 171103894 - MGP_CBAJ_P0058203 Gss protein_coding protein_coding MGP_CBAJ_T0058204.1 MGP_CBAJ_G0026432.1 mouse_genomes_project 2 171091934 171105279 - Gss protein_coding retained_intron MGP_CBAJ_T0058207.1 MGP_CBAJ_G0026432.1 mouse_genomes_project 2 171103854 171117782 - MGP_CBAJ_P0058207 Gss protein_coding protein_coding MGP_CBAJ_T0058208.1 MGP_CBAJ_G0026432.1 mouse_genomes_project 2 171107684 171130384 - Gss protein_coding processed_transcript MGP_CBAJ_T0058209.1 MGP_CBAJ_G0026432.1 mouse_genomes_project 2 171108420 171122700 - Gss protein_coding retained_intron MGP_CBAJ_T0058210.1 MGP_CBAJ_G0026432.1 mouse_genomes_project 2 171108491 171130224 - MGP_CBAJ_P0058210 Gss protein_coding protein_coding MGP_CBAJ_T0058211.1 MGP_CBAJ_G0026432.1 mouse_genomes_project 2 171109203 171117774 - Gss protein_coding processed_transcript MGP_CBAJ_T0054122.1 MGP_CBAJ_G0025378.1 mouse_genomes_project 2 37513847 37514786 + MGP_CBAJ_P0054122 Olfr340 protein_coding protein_coding MGP_CBAJ_T0052128.1 MGP_CBAJ_G0025047.1 mouse_genomes_project 2 7703045 7709623 - 9230102O04Rik protein_coding processed_transcript MGP_CBAJ_T0052129.1 MGP_CBAJ_G0025047.1 mouse_genomes_project 2 7703046 7703998 - MGP_CBAJ_P0052129 9230102O04Rik protein_coding protein_coding MGP_CBAJ_T0055489.1 MGP_CBAJ_G0025753.1 mouse_genomes_project 2 95380693 95381632 + MGP_CBAJ_P0055489 Olfr1168 protein_coding protein_coding MGP_CBAJ_T0056447.1 MGP_CBAJ_G0026019.1 mouse_genomes_project 2 129916760 129950667 + MGP_CBAJ_P0056447 Disp2 protein_coding protein_coding MGP_CBAJ_T0056448.1 MGP_CBAJ_G0026019.1 mouse_genomes_project 2 129916763 129932292 + MGP_CBAJ_P0056448 Disp2 protein_coding protein_coding MGP_CBAJ_T0056449.1 MGP_CBAJ_G0026019.1 mouse_genomes_project 2 129916780 129950786 + MGP_CBAJ_P0056449 Disp2 protein_coding protein_coding MGP_CBAJ_T0056450.1 MGP_CBAJ_G0026019.1 mouse_genomes_project 2 129916783 129927163 + MGP_CBAJ_P0056450 Disp2 protein_coding protein_coding MGP_CBAJ_T0056451.1 MGP_CBAJ_G0026019.1 mouse_genomes_project 2 129916800 129927162 + Disp2 protein_coding retained_intron MGP_CBAJ_T0052936.1 MGP_CBAJ_G0025192.1 mouse_genomes_project 2 25817980 25875174 - MGP_CBAJ_P0052936 Ccdc187 protein_coding unknown_likely_coding MGP_CBAJ_T0052938.1 MGP_CBAJ_G0025192.1 mouse_genomes_project 2 25845712 25875348 - MGP_CBAJ_P0052938 Ccdc187 protein_coding protein_coding MGP_CBAJ_T0052939.1 MGP_CBAJ_G0025192.1 mouse_genomes_project 2 25855244 25864429 - MGP_CBAJ_P0052939 Ccdc187 protein_coding protein_coding MGP_CBAJ_T0013604.1 MGP_CBAJ_G0011716.1 mouse_genomes_project 2 156512485 156513415 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013564.1 MGP_CBAJ_G0011676.1 mouse_genomes_project 2 134148607 134149200 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0052707.1 MGP_CBAJ_G0025147.1 mouse_genomes_project 2 24708593 24725528 + MGP_CBAJ_P0052707 Anapc2 protein_coding protein_coding MGP_CBAJ_T0052708.1 MGP_CBAJ_G0025147.1 mouse_genomes_project 2 24708710 24716003 + Anapc2 protein_coding processed_transcript MGP_CBAJ_T0052709.1 MGP_CBAJ_G0025147.1 mouse_genomes_project 2 24709593 24718034 + MGP_CBAJ_P0052709 Anapc2 protein_coding protein_coding MGP_CBAJ_T0052710.1 MGP_CBAJ_G0025147.1 mouse_genomes_project 2 24718621 24720086 + Anapc2 protein_coding processed_transcript MGP_CBAJ_T0055680.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98954678 99003581 - MGP_CBAJ_P0055680 Madd protein_coding protein_coding MGP_CBAJ_T0055681.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98954678 99000056 - MGP_CBAJ_P0055681 Madd protein_coding protein_coding MGP_CBAJ_T0055682.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98954678 99000061 - MGP_CBAJ_P0055682 Madd protein_coding protein_coding MGP_CBAJ_T0055683.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98954678 99004539 - MGP_CBAJ_P0055683 Madd protein_coding protein_coding MGP_CBAJ_T0055684.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98954678 99000050 - MGP_CBAJ_P0055684 Madd protein_coding protein_coding MGP_CBAJ_T0055685.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98954678 99004539 - MGP_CBAJ_P0055685 Madd protein_coding protein_coding MGP_CBAJ_T0055686.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98954678 99004539 - MGP_CBAJ_P0055686 Madd protein_coding protein_coding MGP_CBAJ_T0055687.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98954678 99003622 - MGP_CBAJ_P0055687 Madd protein_coding protein_coding MGP_CBAJ_T0055688.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98954678 99004539 - MGP_CBAJ_P0055688 Madd protein_coding protein_coding MGP_CBAJ_T0055689.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98954678 99003621 - MGP_CBAJ_P0055689 Madd protein_coding protein_coding MGP_CBAJ_T0055690.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98954678 99004539 - MGP_CBAJ_P0055690 Madd protein_coding protein_coding MGP_CBAJ_T0055691.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98954678 99000052 - MGP_CBAJ_P0055691 Madd protein_coding protein_coding MGP_CBAJ_T0055692.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98954679 99004539 - Madd protein_coding processed_transcript MGP_CBAJ_T0055693.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98954679 99004539 - Madd protein_coding processed_transcript MGP_CBAJ_T0055694.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98954679 99004539 - Madd protein_coding processed_transcript MGP_CBAJ_T0055695.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98954679 99004539 - Madd protein_coding processed_transcript MGP_CBAJ_T0055696.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98954679 99004539 - Madd protein_coding processed_transcript MGP_CBAJ_T0055697.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98954679 99004539 - MGP_CBAJ_P0055697 Madd protein_coding protein_coding MGP_CBAJ_T0055698.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98955668 98956575 - Madd protein_coding retained_intron MGP_CBAJ_T0055699.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98963929 98975670 - Madd protein_coding retained_intron MGP_CBAJ_T0055700.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98964158 98973210 - Madd protein_coding retained_intron MGP_CBAJ_T0055701.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98972865 98975514 - Madd protein_coding retained_intron MGP_CBAJ_T0055702.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98976276 98981076 - Madd protein_coding retained_intron MGP_CBAJ_T0055703.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98981764 99003759 - Madd protein_coding retained_intron MGP_CBAJ_T0055704.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98982111 99003780 - MGP_CBAJ_P0055704 Madd protein_coding protein_coding MGP_CBAJ_T0055705.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98988534 98996480 - MGP_CBAJ_P0055705 Madd protein_coding protein_coding MGP_CBAJ_T0055706.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98998371 99004558 - Madd protein_coding retained_intron MGP_CBAJ_T0055707.1 MGP_CBAJ_G0025842.1 mouse_genomes_project 2 98999183 99003772 - Madd protein_coding processed_transcript MGP_CBAJ_T0013637.1 MGP_CBAJ_G0011749.1 mouse_genomes_project 2 166628727 166629178 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013384.1 MGP_CBAJ_G0011496.1 mouse_genomes_project 2 63641798 63642192 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013427.1 MGP_CBAJ_G0011539.1 mouse_genomes_project 2 80291926 80292561 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101421.1 MGP_CBAJ_G0039467.1 mouse_genomes_project 2 158593682 158602213 + unitary_pseudogene processed_transcript MGP_CBAJ_T0101422.1 MGP_CBAJ_G0039467.1 mouse_genomes_project 2 158598813 158635607 + unitary_pseudogene processed_transcript MGP_CBAJ_T0101423.1 MGP_CBAJ_G0039467.1 mouse_genomes_project 2 158598878 158601144 + unitary_pseudogene unitary_pseudogene MGP_CBAJ_T0101424.1 MGP_CBAJ_G0039467.1 mouse_genomes_project 2 158599594 158601151 + unitary_pseudogene processed_transcript MGP_CBAJ_T0056294.1 MGP_CBAJ_G0025976.1 mouse_genomes_project 2 122343079 122344018 - MGP_CBAJ_P0056294 protein_coding protein_coding MGP_CBAJ_T0057812.1 MGP_CBAJ_G0026325.1 mouse_genomes_project 2 165399706 165408234 + MGP_CBAJ_P0057812 Cst7 protein_coding protein_coding MGP_CBAJ_T0057750.1 MGP_CBAJ_G0026299.1 mouse_genomes_project 2 161197546 161333613 + MGP_CBAJ_P0057750 Kiz protein_coding protein_coding MGP_CBAJ_T0057751.1 MGP_CBAJ_G0026299.1 mouse_genomes_project 2 161197591 161236317 + MGP_CBAJ_P0057751 Kiz protein_coding protein_coding MGP_CBAJ_T0057752.1 MGP_CBAJ_G0026299.1 mouse_genomes_project 2 161315283 161333608 + Kiz protein_coding retained_intron MGP_CBAJ_T0054942.1 MGP_CBAJ_G0025542.1 mouse_genomes_project 2 77378132 77545515 + MGP_CBAJ_P0054942 Zak protein_coding protein_coding MGP_CBAJ_T0054943.1 MGP_CBAJ_G0025542.1 mouse_genomes_project 2 77378223 77508326 + MGP_CBAJ_P0054943 Zak protein_coding protein_coding MGP_CBAJ_T0054944.1 MGP_CBAJ_G0025542.1 mouse_genomes_project 2 77378259 77500066 + Zak protein_coding retained_intron MGP_CBAJ_T0054945.1 MGP_CBAJ_G0025542.1 mouse_genomes_project 2 77378272 77490684 + Zak protein_coding retained_intron MGP_CBAJ_T0054946.1 MGP_CBAJ_G0025542.1 mouse_genomes_project 2 77378289 77465709 + Zak protein_coding retained_intron MGP_CBAJ_T0054947.1 MGP_CBAJ_G0025542.1 mouse_genomes_project 2 77396668 77456488 + MGP_CBAJ_P0054947 Zak protein_coding protein_coding MGP_CBAJ_T0007285.1 MGP_CBAJ_G0005967.1 mouse_genomes_project 2 179694186 179699799 - lincRNA lincRNA MGP_CBAJ_T0055466.1 MGP_CBAJ_G0025732.1 mouse_genomes_project 2 94835521 94836456 - MGP_CBAJ_P0055466 Olfr1141 protein_coding protein_coding MGP_CBAJ_T0058237.1 MGP_CBAJ_G0026440.1 mouse_genomes_project 2 171377768 171384759 - MGP_CBAJ_P0058237 Eif6 protein_coding protein_coding MGP_CBAJ_T0058238.1 MGP_CBAJ_G0026440.1 mouse_genomes_project 2 171377773 171380411 - Eif6 protein_coding processed_transcript MGP_CBAJ_T0058239.1 MGP_CBAJ_G0026440.1 mouse_genomes_project 2 171377969 171384270 - MGP_CBAJ_P0058239 Eif6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058240.1 MGP_CBAJ_G0026440.1 mouse_genomes_project 2 171380767 171384270 - Eif6 protein_coding retained_intron MGP_CBAJ_T0058241.1 MGP_CBAJ_G0026440.1 mouse_genomes_project 2 171380767 171384270 - MGP_CBAJ_P0058241 Eif6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058242.1 MGP_CBAJ_G0026440.1 mouse_genomes_project 2 171381709 171384600 - MGP_CBAJ_P0058242 Eif6 protein_coding protein_coding MGP_CBAJ_T0058243.1 MGP_CBAJ_G0026440.1 mouse_genomes_project 2 171382993 171384497 - MGP_CBAJ_P0058243 Eif6 protein_coding protein_coding MGP_CBAJ_T0056472.1 MGP_CBAJ_G0026023.1 mouse_genomes_project 2 130077047 130079137 + MGP_CBAJ_P0056472 Chst14 protein_coding protein_coding MGP_CBAJ_T0056473.1 MGP_CBAJ_G0026023.1 mouse_genomes_project 2 130077065 130079131 + MGP_CBAJ_P0056473 Chst14 protein_coding protein_coding MGP_CBAJ_T0013353.1 MGP_CBAJ_G0011465.1 mouse_genomes_project 2 53312303 53312715 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0058587.1 MGP_CBAJ_G0026496.1 mouse_genomes_project 2 176506539 176508768 - MGP_CBAJ_P0058587 Gm826 protein_coding protein_coding MGP_CBAJ_T0058588.1 MGP_CBAJ_G0026496.1 mouse_genomes_project 2 176506890 176535027 - Gm826 protein_coding processed_transcript MGP_CBAJ_T0058589.1 MGP_CBAJ_G0026496.1 mouse_genomes_project 2 176507007 176528315 - MGP_CBAJ_P0058589 Gm826 protein_coding protein_coding MGP_CBAJ_T0052191.1 MGP_CBAJ_G0025059.1 mouse_genomes_project 2 9769594 9802551 + MGP_CBAJ_P0052191 Il15ra protein_coding protein_coding MGP_CBAJ_T0052192.1 MGP_CBAJ_G0025059.1 mouse_genomes_project 2 9769633 9801859 + Il15ra protein_coding processed_transcript MGP_CBAJ_T0052193.1 MGP_CBAJ_G0025059.1 mouse_genomes_project 2 9769653 9802196 + MGP_CBAJ_P0052193 Il15ra protein_coding protein_coding MGP_CBAJ_T0052194.1 MGP_CBAJ_G0025059.1 mouse_genomes_project 2 9769673 9802202 + MGP_CBAJ_P0052194 Il15ra protein_coding protein_coding MGP_CBAJ_T0052195.1 MGP_CBAJ_G0025059.1 mouse_genomes_project 2 9769679 9787010 + Il15ra protein_coding retained_intron MGP_CBAJ_T0052196.1 MGP_CBAJ_G0025059.1 mouse_genomes_project 2 9769691 9802202 + Il15ra protein_coding processed_transcript MGP_CBAJ_T0052197.1 MGP_CBAJ_G0025059.1 mouse_genomes_project 2 9769747 9802216 + MGP_CBAJ_P0052197 Il15ra protein_coding protein_coding MGP_CBAJ_T0052198.1 MGP_CBAJ_G0025059.1 mouse_genomes_project 2 9769856 9801635 + Il15ra protein_coding processed_transcript MGP_CBAJ_T0052199.1 MGP_CBAJ_G0025059.1 mouse_genomes_project 2 9770016 9788549 + MGP_CBAJ_P0052199 Il15ra protein_coding protein_coding MGP_CBAJ_T0052200.1 MGP_CBAJ_G0025059.1 mouse_genomes_project 2 9770063 9788836 + Il15ra protein_coding retained_intron MGP_CBAJ_T0052201.1 MGP_CBAJ_G0025059.1 mouse_genomes_project 2 9770081 9802220 + MGP_CBAJ_P0052201 Il15ra protein_coding protein_coding MGP_CBAJ_T0052202.1 MGP_CBAJ_G0025059.1 mouse_genomes_project 2 9770114 9801635 + MGP_CBAJ_P0052202 Il15ra protein_coding protein_coding MGP_CBAJ_T0052203.1 MGP_CBAJ_G0025059.1 mouse_genomes_project 2 9770114 9802551 + MGP_CBAJ_P0052203 Il15ra protein_coding protein_coding MGP_CBAJ_T0052204.1 MGP_CBAJ_G0025059.1 mouse_genomes_project 2 9770115 9801635 + MGP_CBAJ_P0052204 Il15ra protein_coding protein_coding MGP_CBAJ_T0052205.1 MGP_CBAJ_G0025059.1 mouse_genomes_project 2 9770152 9801483 + MGP_CBAJ_P0052205 Il15ra protein_coding protein_coding MGP_CBAJ_T0052206.1 MGP_CBAJ_G0025059.1 mouse_genomes_project 2 9786770 9788730 + Il15ra protein_coding retained_intron MGP_CBAJ_T0052207.1 MGP_CBAJ_G0025059.1 mouse_genomes_project 2 9786874 9801651 + MGP_CBAJ_P0052207 Il15ra protein_coding protein_coding MGP_CBAJ_T0052208.1 MGP_CBAJ_G0025059.1 mouse_genomes_project 2 9791607 9802202 + Il15ra protein_coding retained_intron MGP_CBAJ_T0059302.1 MGP_CBAJ_G0026679.1 mouse_genomes_project 2 198973187 198978211 - MGP_CBAJ_P0059302 Hrh3 protein_coding protein_coding MGP_CBAJ_T0059303.1 MGP_CBAJ_G0026679.1 mouse_genomes_project 2 198973373 198977874 - MGP_CBAJ_P0059303 Hrh3 protein_coding protein_coding MGP_CBAJ_T0059304.1 MGP_CBAJ_G0026679.1 mouse_genomes_project 2 198973600 198977874 - MGP_CBAJ_P0059304 Hrh3 protein_coding protein_coding MGP_CBAJ_T0059305.1 MGP_CBAJ_G0026679.1 mouse_genomes_project 2 198973600 198977874 - MGP_CBAJ_P0059305 Hrh3 protein_coding protein_coding MGP_CBAJ_T0059306.1 MGP_CBAJ_G0026679.1 mouse_genomes_project 2 198974001 198977897 - MGP_CBAJ_P0059306 Hrh3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059307.1 MGP_CBAJ_G0026679.1 mouse_genomes_project 2 198974218 198977874 - MGP_CBAJ_P0059307 Hrh3 protein_coding protein_coding MGP_CBAJ_T0059308.1 MGP_CBAJ_G0026679.1 mouse_genomes_project 2 198974218 198977874 - MGP_CBAJ_P0059308 Hrh3 protein_coding protein_coding MGP_CBAJ_T0059309.1 MGP_CBAJ_G0026679.1 mouse_genomes_project 2 198974706 198977058 - Hrh3 protein_coding retained_intron MGP_CBAJ_T0013226.1 MGP_CBAJ_G0011338.1 mouse_genomes_project 2 715232 716021 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101811.1 MGP_CBAJ_G0039842.1 mouse_genomes_project 2 94958230 94959167 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099103.1 MGP_CBAJ_G0037358.1 mouse_genomes_project 2 46488585 46488694 + Gm22867 snRNA snRNA MGP_CBAJ_T0013381.1 MGP_CBAJ_G0011493.1 mouse_genomes_project 2 62684549 62685074 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100420.1 MGP_CBAJ_G0038675.1 mouse_genomes_project 2 179206810 179206936 + Gm22936 snoRNA snoRNA MGP_CBAJ_T0056622.1 MGP_CBAJ_G0026058.1 mouse_genomes_project 2 131581725 131607873 - MGP_CBAJ_P0056622 Pla2g4d protein_coding protein_coding MGP_CBAJ_T0055385.1 MGP_CBAJ_G0025661.1 mouse_genomes_project 2 92694921 92695832 + MGP_CBAJ_P0055385 Olfr1033 protein_coding protein_coding MGP_CBAJ_T0054770.1 MGP_CBAJ_G0025510.1 mouse_genomes_project 2 74052170 74081494 + MGP_CBAJ_P0054770 Dhrs9 protein_coding protein_coding MGP_CBAJ_T0053399.1 MGP_CBAJ_G0025268.1 mouse_genomes_project 2 30321646 30324226 + MGP_CBAJ_P0053399 Endog protein_coding protein_coding MGP_CBAJ_T0055312.1 MGP_CBAJ_G0025624.1 mouse_genomes_project 2 91327627 91330831 + MGP_CBAJ_P0055312 Timm10 protein_coding protein_coding MGP_CBAJ_T0055313.1 MGP_CBAJ_G0025624.1 mouse_genomes_project 2 91328014 91330731 + MGP_CBAJ_P0055313 Timm10 protein_coding protein_coding MGP_CBAJ_T0054684.1 MGP_CBAJ_G0025492.1 mouse_genomes_project 2 69904069 69973505 + MGP_CBAJ_P0054684 protein_coding protein_coding MGP_CBAJ_T0054685.1 MGP_CBAJ_G0025492.1 mouse_genomes_project 2 69904069 70052324 + MGP_CBAJ_P0054685 protein_coding protein_coding MGP_CBAJ_T0054686.1 MGP_CBAJ_G0025492.1 mouse_genomes_project 2 69904109 69906540 + protein_coding retained_intron MGP_CBAJ_T0054687.1 MGP_CBAJ_G0025492.1 mouse_genomes_project 2 69950253 69953345 + protein_coding retained_intron MGP_CBAJ_T0054688.1 MGP_CBAJ_G0025492.1 mouse_genomes_project 2 69950329 70050118 + MGP_CBAJ_P0054688 protein_coding protein_coding MGP_CBAJ_T0054689.1 MGP_CBAJ_G0025492.1 mouse_genomes_project 2 69951992 70052324 + MGP_CBAJ_P0054689 protein_coding protein_coding MGP_CBAJ_T0054690.1 MGP_CBAJ_G0025492.1 mouse_genomes_project 2 69962606 70052332 + MGP_CBAJ_P0054690 protein_coding unknown_likely_coding MGP_CBAJ_T0054691.1 MGP_CBAJ_G0025492.1 mouse_genomes_project 2 69965602 69967189 + protein_coding retained_intron MGP_CBAJ_T0054692.1 MGP_CBAJ_G0025492.1 mouse_genomes_project 2 70003872 70014766 + MGP_CBAJ_P0054692 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054693.1 MGP_CBAJ_G0025492.1 mouse_genomes_project 2 70003895 70014717 + MGP_CBAJ_P0054693 protein_coding nonsense_mediated_decay MGP_CBAJ_T0017483.1 MGP_CBAJ_G0015140.1 mouse_genomes_project 2 18416451 18417775 + 1810010K12Rik processed_transcript processed_transcript MGP_CBAJ_T0017484.1 MGP_CBAJ_G0015140.1 mouse_genomes_project 2 18417093 18419619 + 1810010K12Rik processed_transcript processed_transcript MGP_CBAJ_T0007110.1 MGP_CBAJ_G0005825.1 mouse_genomes_project 2 64721597 64732323 - Gm13582 lincRNA lincRNA MGP_CBAJ_T0013461.1 MGP_CBAJ_G0011573.1 mouse_genomes_project 2 92346765 92347697 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0052672.1 MGP_CBAJ_G0025139.1 mouse_genomes_project 2 24668371 24673626 - MGP_CBAJ_P0052672 protein_coding protein_coding MGP_CBAJ_T0052673.1 MGP_CBAJ_G0025139.1 mouse_genomes_project 2 24670255 24672313 - protein_coding processed_transcript MGP_CBAJ_T0052674.1 MGP_CBAJ_G0025139.1 mouse_genomes_project 2 24671437 24673480 - protein_coding processed_transcript MGP_CBAJ_T0052675.1 MGP_CBAJ_G0025139.1 mouse_genomes_project 2 24671478 24673473 - protein_coding processed_transcript MGP_CBAJ_T0052676.1 MGP_CBAJ_G0025139.1 mouse_genomes_project 2 24671646 24673496 - protein_coding processed_transcript MGP_CBAJ_T0052677.1 MGP_CBAJ_G0025139.1 mouse_genomes_project 2 24671692 24673450 - protein_coding processed_transcript MGP_CBAJ_T0056240.1 MGP_CBAJ_G0025940.1 mouse_genomes_project 2 119924450 120033530 + MGP_CBAJ_P0056240 Lgr4 protein_coding protein_coding MGP_CBAJ_T0056241.1 MGP_CBAJ_G0025940.1 mouse_genomes_project 2 119924450 120033530 + MGP_CBAJ_P0056241 Lgr4 protein_coding protein_coding MGP_CBAJ_T0056242.1 MGP_CBAJ_G0025940.1 mouse_genomes_project 2 119991455 120017134 + Lgr4 protein_coding processed_transcript MGP_CBAJ_T0056243.1 MGP_CBAJ_G0025940.1 mouse_genomes_project 2 120019799 120020732 + Lgr4 protein_coding retained_intron MGP_CBAJ_T0007068.1 MGP_CBAJ_G0005791.1 mouse_genomes_project 2 30740122 30744420 + Gm14487 lincRNA lincRNA MGP_CBAJ_T0059442.1 MGP_CBAJ_G0026707.1 mouse_genomes_project 2 200203216 200210819 - MGP_CBAJ_P0059442 Srms protein_coding protein_coding MGP_CBAJ_T0013437.1 MGP_CBAJ_G0011549.1 mouse_genomes_project 2 84353247 84354497 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003992.1 MGP_CBAJ_G0003537.1 mouse_genomes_project 2 129968798 129972966 - Gm14091 antisense antisense MGP_CBAJ_T0004071.1 MGP_CBAJ_G0003599.1 mouse_genomes_project 2 177095760 177166484 - Gm16751 antisense antisense MGP_CBAJ_T0057637.1 MGP_CBAJ_G0026276.1 mouse_genomes_project 2 157865956 157905419 - MGP_CBAJ_P0057637 Bfsp1 protein_coding protein_coding MGP_CBAJ_T0057638.1 MGP_CBAJ_G0026276.1 mouse_genomes_project 2 157865956 157905189 - MGP_CBAJ_P0057638 Bfsp1 protein_coding protein_coding MGP_CBAJ_T0058969.1 MGP_CBAJ_G0026596.1 mouse_genomes_project 2 183141971 183241888 - Sulf2 protein_coding processed_transcript MGP_CBAJ_T0058970.1 MGP_CBAJ_G0026596.1 mouse_genomes_project 2 183142491 183143838 - Sulf2 protein_coding retained_intron MGP_CBAJ_T0058971.1 MGP_CBAJ_G0026596.1 mouse_genomes_project 2 183142607 183241119 - MGP_CBAJ_P0058971 Sulf2 protein_coding protein_coding MGP_CBAJ_T0058972.1 MGP_CBAJ_G0026596.1 mouse_genomes_project 2 183142634 183145938 - Sulf2 protein_coding processed_transcript MGP_CBAJ_T0058973.1 MGP_CBAJ_G0026596.1 mouse_genomes_project 2 183163857 183241089 - Sulf2 protein_coding processed_transcript MGP_CBAJ_T0058974.1 MGP_CBAJ_G0026596.1 mouse_genomes_project 2 183215910 183240706 - Sulf2 protein_coding processed_transcript MGP_CBAJ_T0007199.1 MGP_CBAJ_G0005898.1 mouse_genomes_project 2 126859543 126860765 - 2700033N17Rik lincRNA lincRNA MGP_CBAJ_T0007283.1 MGP_CBAJ_G0005965.1 mouse_genomes_project 2 179334118 179335220 - Gm14255 lincRNA lincRNA MGP_CBAJ_T0100342.1 MGP_CBAJ_G0038597.1 mouse_genomes_project 2 20953933 20954056 - Gm24886 snoRNA snoRNA MGP_CBAJ_T0057236.1 MGP_CBAJ_G0026188.1 mouse_genomes_project 2 142067135 142154956 - MGP_CBAJ_P0057236 F830045P16Rik protein_coding protein_coding MGP_CBAJ_T0003863.1 MGP_CBAJ_G0003447.1 mouse_genomes_project 2 29349204 29404290 - Gm13402 antisense antisense MGP_CBAJ_T0017615.1 MGP_CBAJ_G0015212.1 mouse_genomes_project 2 141795175 141815722 - 9830144P21Rik processed_transcript processed_transcript MGP_CBAJ_T0017616.1 MGP_CBAJ_G0015212.1 mouse_genomes_project 2 141813467 141819614 - 9830144P21Rik processed_transcript processed_transcript MGP_CBAJ_T0055874.1 MGP_CBAJ_G0025867.1 mouse_genomes_project 2 100435770 100466158 - MGP_CBAJ_P0055874 Cry2 protein_coding protein_coding MGP_CBAJ_T0055875.1 MGP_CBAJ_G0025867.1 mouse_genomes_project 2 100443384 100466151 - MGP_CBAJ_P0055875 Cry2 protein_coding protein_coding MGP_CBAJ_T0055876.1 MGP_CBAJ_G0025867.1 mouse_genomes_project 2 100457278 100466151 - Cry2 protein_coding processed_transcript MGP_CBAJ_T0055877.1 MGP_CBAJ_G0025867.1 mouse_genomes_project 2 100459028 100464507 - Cry2 protein_coding processed_transcript MGP_CBAJ_T0101789.1 MGP_CBAJ_G0039820.1 mouse_genomes_project 2 91666229 91668771 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010230.1 MGP_CBAJ_G0008368.1 mouse_genomes_project 2 8387403 8387500 + Mir669a-2 miRNA miRNA MGP_CBAJ_T0055185.1 MGP_CBAJ_G0025593.1 mouse_genomes_project 2 85599137 85714849 + MGP_CBAJ_P0055185 Ppp1r1c protein_coding protein_coding MGP_CBAJ_T0055186.1 MGP_CBAJ_G0025593.1 mouse_genomes_project 2 85599279 85713068 + MGP_CBAJ_P0055186 Ppp1r1c protein_coding protein_coding MGP_CBAJ_T0055187.1 MGP_CBAJ_G0025593.1 mouse_genomes_project 2 85599280 85720129 + MGP_CBAJ_P0055187 Ppp1r1c protein_coding protein_coding MGP_CBAJ_T0055188.1 MGP_CBAJ_G0025593.1 mouse_genomes_project 2 85599419 85723032 + Ppp1r1c protein_coding processed_transcript MGP_CBAJ_T0055189.1 MGP_CBAJ_G0025593.1 mouse_genomes_project 2 85691326 85713824 + Ppp1r1c protein_coding processed_transcript MGP_CBAJ_T0058073.1 MGP_CBAJ_G0026402.1 mouse_genomes_project 2 169343104 169350916 + MGP_CBAJ_P0058073 Bpifa2 protein_coding protein_coding MGP_CBAJ_T0058074.1 MGP_CBAJ_G0026402.1 mouse_genomes_project 2 169343115 169349281 + MGP_CBAJ_P0058074 Bpifa2 protein_coding protein_coding MGP_CBAJ_T0058075.1 MGP_CBAJ_G0026402.1 mouse_genomes_project 2 169348549 169350447 + Bpifa2 protein_coding retained_intron MGP_CBAJ_T0058076.1 MGP_CBAJ_G0026402.1 mouse_genomes_project 2 169349432 169350913 + Bpifa2 protein_coding retained_intron MGP_CBAJ_T0098162.1 MGP_CBAJ_G0036435.1 mouse_genomes_project 2 144259025 144259327 - Gm22902 ribozyme ribozyme MGP_CBAJ_T0001049.1 MGP_CBAJ_G0000981.1 mouse_genomes_project 2 73587377 73591380 + TEC TEC MGP_CBAJ_T0058484.1 MGP_CBAJ_G0026474.1 mouse_genomes_project 2 173167399 173185211 - Ghrh protein_coding processed_transcript MGP_CBAJ_T0058485.1 MGP_CBAJ_G0026474.1 mouse_genomes_project 2 173167399 173184350 - MGP_CBAJ_P0058485 Ghrh protein_coding protein_coding MGP_CBAJ_T0058486.1 MGP_CBAJ_G0026474.1 mouse_genomes_project 2 173167399 173175271 - MGP_CBAJ_P0058486 Ghrh protein_coding protein_coding MGP_CBAJ_T0057484.1 MGP_CBAJ_G0026241.1 mouse_genomes_project 2 145313461 145368607 - MGP_CBAJ_P0057484 Prokr2 protein_coding protein_coding MGP_CBAJ_T0057485.1 MGP_CBAJ_G0026241.1 mouse_genomes_project 2 145353519 145368605 - MGP_CBAJ_P0057485 Prokr2 protein_coding protein_coding MGP_CBAJ_T0057486.1 MGP_CBAJ_G0026241.1 mouse_genomes_project 2 145353519 145368580 - MGP_CBAJ_P0057486 Prokr2 protein_coding protein_coding MGP_CBAJ_T0057487.1 MGP_CBAJ_G0026241.1 mouse_genomes_project 2 145354371 145368627 - MGP_CBAJ_P0057487 Prokr2 protein_coding protein_coding MGP_CBAJ_T0057488.1 MGP_CBAJ_G0026241.1 mouse_genomes_project 2 145364751 145368601 - MGP_CBAJ_P0057488 Prokr2 protein_coding protein_coding MGP_CBAJ_T0013405.1 MGP_CBAJ_G0011517.1 mouse_genomes_project 2 72238832 72238915 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0057777.1 MGP_CBAJ_G0026310.1 mouse_genomes_project 2 163283266 163321351 - MGP_CBAJ_P0057777 Napb protein_coding nonsense_mediated_decay MGP_CBAJ_T0057778.1 MGP_CBAJ_G0026310.1 mouse_genomes_project 2 163283266 163321405 - MGP_CBAJ_P0057778 Napb protein_coding protein_coding MGP_CBAJ_T0057779.1 MGP_CBAJ_G0026310.1 mouse_genomes_project 2 163295698 163321329 - Napb protein_coding retained_intron MGP_CBAJ_T0053999.1 MGP_CBAJ_G0025355.1 mouse_genomes_project 2 35767372 35787938 - MGP_CBAJ_P0053999 Psmd5 protein_coding protein_coding MGP_CBAJ_T0054000.1 MGP_CBAJ_G0025355.1 mouse_genomes_project 2 35769738 35787909 - Psmd5 protein_coding retained_intron MGP_CBAJ_T0054001.1 MGP_CBAJ_G0025355.1 mouse_genomes_project 2 35770079 35775328 - MGP_CBAJ_P0054001 Psmd5 protein_coding protein_coding MGP_CBAJ_T0054002.1 MGP_CBAJ_G0025355.1 mouse_genomes_project 2 35783914 35791998 - Psmd5 protein_coding processed_transcript MGP_CBAJ_T0054003.1 MGP_CBAJ_G0025355.1 mouse_genomes_project 2 35788083 35789186 - Psmd5 protein_coding processed_transcript MGP_CBAJ_T0055949.1 MGP_CBAJ_G0025882.1 mouse_genomes_project 2 102196689 102200922 - Alkbh3 protein_coding processed_transcript MGP_CBAJ_T0055950.1 MGP_CBAJ_G0025882.1 mouse_genomes_project 2 102196689 102200953 - Alkbh3 protein_coding processed_transcript MGP_CBAJ_T0055951.1 MGP_CBAJ_G0025882.1 mouse_genomes_project 2 102196689 102233655 - MGP_CBAJ_P0055951 Alkbh3 protein_coding protein_coding MGP_CBAJ_T0055952.1 MGP_CBAJ_G0025882.1 mouse_genomes_project 2 102196768 102197766 - Alkbh3 protein_coding processed_transcript MGP_CBAJ_T0055953.1 MGP_CBAJ_G0025882.1 mouse_genomes_project 2 102196776 102233578 - MGP_CBAJ_P0055953 Alkbh3 protein_coding protein_coding MGP_CBAJ_T0055954.1 MGP_CBAJ_G0025882.1 mouse_genomes_project 2 102215604 102233279 - Alkbh3 protein_coding processed_transcript MGP_CBAJ_T0055955.1 MGP_CBAJ_G0025882.1 mouse_genomes_project 2 102215673 102226438 - Alkbh3 protein_coding processed_transcript MGP_CBAJ_T0055956.1 MGP_CBAJ_G0025882.1 mouse_genomes_project 2 102215673 102233602 - MGP_CBAJ_P0055956 Alkbh3 protein_coding protein_coding MGP_CBAJ_T0055957.1 MGP_CBAJ_G0025882.1 mouse_genomes_project 2 102227024 102233602 - Alkbh3 protein_coding processed_transcript MGP_CBAJ_T0055958.1 MGP_CBAJ_G0025882.1 mouse_genomes_project 2 102227494 102233600 - Alkbh3 protein_coding processed_transcript MGP_CBAJ_T0055959.1 MGP_CBAJ_G0025882.1 mouse_genomes_project 2 102229287 102233600 - Alkbh3 protein_coding processed_transcript MGP_CBAJ_T0100421.1 MGP_CBAJ_G0038676.1 mouse_genomes_project 2 181383658 181383789 + Gm24473 snoRNA snoRNA MGP_CBAJ_T0013517.1 MGP_CBAJ_G0011629.1 mouse_genomes_project 2 113097439 113097856 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0054513.1 MGP_CBAJ_G0025468.1 mouse_genomes_project 2 63224031 63481115 + MGP_CBAJ_P0054513 Tanc1 protein_coding protein_coding MGP_CBAJ_T0054514.1 MGP_CBAJ_G0025468.1 mouse_genomes_project 2 63224062 63265252 + Tanc1 protein_coding retained_intron MGP_CBAJ_T0054515.1 MGP_CBAJ_G0025468.1 mouse_genomes_project 2 63242037 63262800 + Tanc1 protein_coding retained_intron MGP_CBAJ_T0054516.1 MGP_CBAJ_G0025468.1 mouse_genomes_project 2 63262605 63480683 + MGP_CBAJ_P0054516 Tanc1 protein_coding protein_coding MGP_CBAJ_T0054517.1 MGP_CBAJ_G0025468.1 mouse_genomes_project 2 63317534 63480691 + MGP_CBAJ_P0054517 Tanc1 protein_coding protein_coding MGP_CBAJ_T0054518.1 MGP_CBAJ_G0025468.1 mouse_genomes_project 2 63334207 63352202 + Tanc1 protein_coding processed_transcript MGP_CBAJ_T0054519.1 MGP_CBAJ_G0025468.1 mouse_genomes_project 2 63369996 63453605 + Tanc1 protein_coding retained_intron MGP_CBAJ_T0054520.1 MGP_CBAJ_G0025468.1 mouse_genomes_project 2 63399596 63402685 + Tanc1 protein_coding processed_transcript MGP_CBAJ_T0054521.1 MGP_CBAJ_G0025468.1 mouse_genomes_project 2 63412348 63418137 + Tanc1 protein_coding processed_transcript MGP_CBAJ_T0054522.1 MGP_CBAJ_G0025468.1 mouse_genomes_project 2 63438312 63441749 + Tanc1 protein_coding retained_intron MGP_CBAJ_T0054523.1 MGP_CBAJ_G0025468.1 mouse_genomes_project 2 63476705 63480681 + Tanc1 protein_coding retained_intron MGP_CBAJ_T0055552.1 MGP_CBAJ_G0025804.1 mouse_genomes_project 2 97209588 97220471 - MGP_CBAJ_P0055552 protein_coding protein_coding MGP_CBAJ_T0013239.1 MGP_CBAJ_G0011351.1 mouse_genomes_project 2 6288081 6288628 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0057853.1 MGP_CBAJ_G0026335.1 mouse_genomes_project 2 166407216 166427923 + MGP_CBAJ_P0057853 Nsfl1c protein_coding protein_coding MGP_CBAJ_T0057854.1 MGP_CBAJ_G0026335.1 mouse_genomes_project 2 166407223 166423026 + Nsfl1c protein_coding retained_intron MGP_CBAJ_T0057855.1 MGP_CBAJ_G0026335.1 mouse_genomes_project 2 166407324 166417158 + Nsfl1c protein_coding retained_intron MGP_CBAJ_T0057856.1 MGP_CBAJ_G0026335.1 mouse_genomes_project 2 166407345 166419344 + Nsfl1c protein_coding retained_intron MGP_CBAJ_T0057857.1 MGP_CBAJ_G0026335.1 mouse_genomes_project 2 166410464 166427682 + MGP_CBAJ_P0057857 Nsfl1c protein_coding protein_coding MGP_CBAJ_T0057858.1 MGP_CBAJ_G0026335.1 mouse_genomes_project 2 166418247 166425599 + Nsfl1c protein_coding processed_transcript MGP_CBAJ_T0057859.1 MGP_CBAJ_G0026335.1 mouse_genomes_project 2 166418900 166427602 + Nsfl1c protein_coding retained_intron MGP_CBAJ_T0057860.1 MGP_CBAJ_G0026335.1 mouse_genomes_project 2 166419657 166425629 + Nsfl1c protein_coding retained_intron MGP_CBAJ_T0057861.1 MGP_CBAJ_G0026335.1 mouse_genomes_project 2 166425036 166427875 + Nsfl1c protein_coding retained_intron MGP_CBAJ_T0013467.1 MGP_CBAJ_G0011579.1 mouse_genomes_project 2 94196947 94213444 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013242.1 MGP_CBAJ_G0011354.1 mouse_genomes_project 2 8828509 8829320 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0058786.1 MGP_CBAJ_G0026553.1 mouse_genomes_project 2 181312337 181318587 - MGP_CBAJ_P0058786 Wfdc6a protein_coding protein_coding MGP_CBAJ_T0055299.1 MGP_CBAJ_G0025619.1 mouse_genomes_project 2 91222843 91227434 + MGP_CBAJ_P0055299 Ypel4 protein_coding protein_coding MGP_CBAJ_T0055300.1 MGP_CBAJ_G0025619.1 mouse_genomes_project 2 91222883 91227434 + MGP_CBAJ_P0055300 Ypel4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0055301.1 MGP_CBAJ_G0025619.1 mouse_genomes_project 2 91222908 91224404 + Ypel4 protein_coding processed_transcript MGP_CBAJ_T0055302.1 MGP_CBAJ_G0025619.1 mouse_genomes_project 2 91223012 91227428 + Ypel4 protein_coding retained_intron MGP_CBAJ_T0011361.1 MGP_CBAJ_G0009499.1 mouse_genomes_project 2 19641236 19641325 + Gm27446 misc_RNA misc_RNA MGP_CBAJ_T0052805.1 MGP_CBAJ_G0025161.1 mouse_genomes_project 2 24935086 24938677 - MGP_CBAJ_P0052805 Ptgds protein_coding protein_coding MGP_CBAJ_T0052806.1 MGP_CBAJ_G0025161.1 mouse_genomes_project 2 24935086 24938473 - MGP_CBAJ_P0052806 Ptgds protein_coding protein_coding MGP_CBAJ_T0052807.1 MGP_CBAJ_G0025161.1 mouse_genomes_project 2 24935086 24938380 - MGP_CBAJ_P0052807 Ptgds protein_coding protein_coding MGP_CBAJ_T0052808.1 MGP_CBAJ_G0025161.1 mouse_genomes_project 2 24935088 24938014 - Ptgds protein_coding retained_intron MGP_CBAJ_T0052809.1 MGP_CBAJ_G0025161.1 mouse_genomes_project 2 24935089 24937788 - Ptgds protein_coding processed_transcript MGP_CBAJ_T0100387.1 MGP_CBAJ_G0038642.1 mouse_genomes_project 2 122129852 122129983 + Gm26421 snoRNA snoRNA MGP_CBAJ_T0013341.1 MGP_CBAJ_G0011453.1 mouse_genomes_project 2 48008723 48009722 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0053303.1 MGP_CBAJ_G0025257.1 mouse_genomes_project 2 29899232 29924891 + Urm1 protein_coding processed_transcript MGP_CBAJ_T0053304.1 MGP_CBAJ_G0025257.1 mouse_genomes_project 2 29907138 29925120 + Urm1 protein_coding processed_transcript MGP_CBAJ_T0053305.1 MGP_CBAJ_G0025257.1 mouse_genomes_project 2 29907138 29926748 + MGP_CBAJ_P0053305 Urm1 protein_coding protein_coding MGP_CBAJ_T0053306.1 MGP_CBAJ_G0025257.1 mouse_genomes_project 2 29907157 29925167 + Urm1 protein_coding processed_transcript MGP_CBAJ_T0053307.1 MGP_CBAJ_G0025257.1 mouse_genomes_project 2 29907191 29915313 + Urm1 protein_coding retained_intron MGP_CBAJ_T0053308.1 MGP_CBAJ_G0025257.1 mouse_genomes_project 2 29923393 29925810 + Urm1 protein_coding retained_intron MGP_CBAJ_T0004094.1 MGP_CBAJ_G0003614.1 mouse_genomes_project 2 184465889 184467113 + Gm14291 antisense antisense MGP_CBAJ_T0052760.1 MGP_CBAJ_G0025156.1 mouse_genomes_project 2 24861092 24868070 + Npdc1 protein_coding processed_transcript MGP_CBAJ_T0052761.1 MGP_CBAJ_G0025156.1 mouse_genomes_project 2 24862210 24869908 + Npdc1 protein_coding processed_transcript MGP_CBAJ_T0052762.1 MGP_CBAJ_G0025156.1 mouse_genomes_project 2 24864812 24873561 + MGP_CBAJ_P0052762 Npdc1 protein_coding protein_coding MGP_CBAJ_T0052763.1 MGP_CBAJ_G0025156.1 mouse_genomes_project 2 24864848 24868578 + Npdc1 protein_coding processed_transcript MGP_CBAJ_T0052764.1 MGP_CBAJ_G0025156.1 mouse_genomes_project 2 24864910 24869577 + MGP_CBAJ_P0052764 Npdc1 protein_coding protein_coding MGP_CBAJ_T0052765.1 MGP_CBAJ_G0025156.1 mouse_genomes_project 2 24864912 24873561 + MGP_CBAJ_P0052765 Npdc1 protein_coding protein_coding MGP_CBAJ_T0052766.1 MGP_CBAJ_G0025156.1 mouse_genomes_project 2 24864935 24870045 + MGP_CBAJ_P0052766 Npdc1 protein_coding protein_coding MGP_CBAJ_T0052767.1 MGP_CBAJ_G0025156.1 mouse_genomes_project 2 24864980 24868841 + Npdc1 protein_coding processed_transcript MGP_CBAJ_T0052768.1 MGP_CBAJ_G0025156.1 mouse_genomes_project 2 24865189 24869733 + Npdc1 protein_coding processed_transcript MGP_CBAJ_T0052769.1 MGP_CBAJ_G0025156.1 mouse_genomes_project 2 24865814 24873558 + Npdc1 protein_coding processed_transcript MGP_CBAJ_T0052770.1 MGP_CBAJ_G0025156.1 mouse_genomes_project 2 24868036 24873561 + MGP_CBAJ_P0052770 Npdc1 protein_coding protein_coding MGP_CBAJ_T0052771.1 MGP_CBAJ_G0025156.1 mouse_genomes_project 2 24869011 24873323 + Npdc1 protein_coding processed_transcript MGP_CBAJ_T0052772.1 MGP_CBAJ_G0025156.1 mouse_genomes_project 2 24869421 24873555 + Npdc1 protein_coding processed_transcript MGP_CBAJ_T0052773.1 MGP_CBAJ_G0025156.1 mouse_genomes_project 2 24872939 24873558 + Npdc1 protein_coding processed_transcript MGP_CBAJ_T0007213.1 MGP_CBAJ_G0005908.1 mouse_genomes_project 2 130836434 130842881 + 1700020I14Rik lincRNA lincRNA MGP_CBAJ_T0007214.1 MGP_CBAJ_G0005908.1 mouse_genomes_project 2 130836440 130849736 + 1700020I14Rik lincRNA lincRNA MGP_CBAJ_T0007157.1 MGP_CBAJ_G0005865.1 mouse_genomes_project 2 100018700 100077375 - lincRNA lincRNA MGP_CBAJ_T0007159.1 MGP_CBAJ_G0005867.1 mouse_genomes_project 2 100517697 100567743 + Gm13814 lincRNA lincRNA MGP_CBAJ_T0053309.1 MGP_CBAJ_G0025258.1 mouse_genomes_project 2 29954389 29956581 + MGP_CBAJ_P0053309 Cercam protein_coding protein_coding MGP_CBAJ_T0053310.1 MGP_CBAJ_G0025258.1 mouse_genomes_project 2 29954719 29976763 + MGP_CBAJ_P0053310 Cercam protein_coding protein_coding MGP_CBAJ_T0053311.1 MGP_CBAJ_G0025258.1 mouse_genomes_project 2 29954769 29956535 + MGP_CBAJ_P0053311 Cercam protein_coding protein_coding MGP_CBAJ_T0053312.1 MGP_CBAJ_G0025258.1 mouse_genomes_project 2 29960857 29965526 + Cercam protein_coding retained_intron MGP_CBAJ_T0053313.1 MGP_CBAJ_G0025258.1 mouse_genomes_project 2 29961402 29973202 + Cercam protein_coding retained_intron MGP_CBAJ_T0010279.1 MGP_CBAJ_G0008417.1 mouse_genomes_project 2 33367765 33367847 - Mir2861 miRNA miRNA MGP_CBAJ_T0100357.1 MGP_CBAJ_G0038612.1 mouse_genomes_project 2 38526003 38526114 - Snord90 snoRNA snoRNA MGP_CBAJ_T0054264.1 MGP_CBAJ_G0025425.1 mouse_genomes_project 2 41550874 41557250 - MGP_CBAJ_P0054264 Atp6v1g1 protein_coding protein_coding MGP_CBAJ_T0057111.1 MGP_CBAJ_G0026153.1 mouse_genomes_project 2 139610183 139623350 + MGP_CBAJ_P0057111 Tmem127 protein_coding protein_coding MGP_CBAJ_T0057112.1 MGP_CBAJ_G0026153.1 mouse_genomes_project 2 139610244 139619414 + MGP_CBAJ_P0057112 Tmem127 protein_coding protein_coding MGP_CBAJ_T0057113.1 MGP_CBAJ_G0026153.1 mouse_genomes_project 2 139610248 139619786 + MGP_CBAJ_P0057113 Tmem127 protein_coding protein_coding MGP_CBAJ_T0007263.1 MGP_CBAJ_G0005948.1 mouse_genomes_project 2 167787845 167789804 - Gm26841 lincRNA lincRNA MGP_CBAJ_T0056298.1 MGP_CBAJ_G0025980.1 mouse_genomes_project 2 122615631 122625170 + MGP_CBAJ_P0056298 Lpcat4 protein_coding protein_coding MGP_CBAJ_T0056299.1 MGP_CBAJ_G0025980.1 mouse_genomes_project 2 122617652 122620251 + Lpcat4 protein_coding processed_transcript MGP_CBAJ_T0056300.1 MGP_CBAJ_G0025980.1 mouse_genomes_project 2 122618139 122618929 + Lpcat4 protein_coding processed_transcript MGP_CBAJ_T0056301.1 MGP_CBAJ_G0025980.1 mouse_genomes_project 2 122620775 122623167 + Lpcat4 protein_coding processed_transcript MGP_CBAJ_T0013525.1 MGP_CBAJ_G0011637.1 mouse_genomes_project 2 114497055 114497477 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010346.1 MGP_CBAJ_G0008484.1 mouse_genomes_project 2 171160550 171160629 + Mir499 miRNA miRNA MGP_CBAJ_T0052953.1 MGP_CBAJ_G0025195.1 mouse_genomes_project 2 25926107 25930087 - Dnlz protein_coding processed_transcript MGP_CBAJ_T0052954.1 MGP_CBAJ_G0025195.1 mouse_genomes_project 2 25926107 25930097 - MGP_CBAJ_P0052954 Dnlz protein_coding protein_coding MGP_CBAJ_T0003835.1 MGP_CBAJ_G0003428.1 mouse_genomes_project 2 19351310 19379953 - Gm17171 antisense antisense MGP_CBAJ_T0052231.1 MGP_CBAJ_G0025062.1 mouse_genomes_project 2 10220714 10432507 - MGP_CBAJ_P0052231 Itga8 protein_coding protein_coding MGP_CBAJ_T0052232.1 MGP_CBAJ_G0025062.1 mouse_genomes_project 2 10221561 10432477 - MGP_CBAJ_P0052232 Itga8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052233.1 MGP_CBAJ_G0025062.1 mouse_genomes_project 2 10223152 10245511 - MGP_CBAJ_P0052233 Itga8 protein_coding protein_coding MGP_CBAJ_T0052234.1 MGP_CBAJ_G0025062.1 mouse_genomes_project 2 10298209 10308837 - Itga8 protein_coding retained_intron MGP_CBAJ_T0052235.1 MGP_CBAJ_G0025062.1 mouse_genomes_project 2 10342373 10366626 - Itga8 protein_coding processed_transcript MGP_CBAJ_T0052236.1 MGP_CBAJ_G0025062.1 mouse_genomes_project 2 10376782 10432507 - Itga8 protein_coding retained_intron MGP_CBAJ_T0052237.1 MGP_CBAJ_G0025062.1 mouse_genomes_project 2 10417548 10432173 - Itga8 protein_coding processed_transcript MGP_CBAJ_T0055222.1 MGP_CBAJ_G0025603.1 mouse_genomes_project 2 89282362 89354973 + MGP_CBAJ_P0055222 Fsip2 protein_coding protein_coding MGP_CBAJ_T0055223.1 MGP_CBAJ_G0025603.1 mouse_genomes_project 2 89288219 89305587 + MGP_CBAJ_P0055223 Fsip2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0055224.1 MGP_CBAJ_G0025603.1 mouse_genomes_project 2 89321293 89354973 + MGP_CBAJ_P0055224 Fsip2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054138.1 MGP_CBAJ_G0025393.1 mouse_genomes_project 2 38012762 38013695 - MGP_CBAJ_P0054138 Olfr355 protein_coding protein_coding MGP_CBAJ_T0055398.1 MGP_CBAJ_G0025674.1 mouse_genomes_project 2 92997630 92998569 + MGP_CBAJ_P0055398 Olfr1052 protein_coding protein_coding MGP_CBAJ_T0055938.1 MGP_CBAJ_G0025879.1 mouse_genomes_project 2 102063898 102077678 - MGP_CBAJ_P0055938 Accsl protein_coding protein_coding MGP_CBAJ_T0055939.1 MGP_CBAJ_G0025879.1 mouse_genomes_project 2 102063899 102065559 - MGP_CBAJ_P0055939 Accsl protein_coding protein_coding MGP_CBAJ_T0055940.1 MGP_CBAJ_G0025879.1 mouse_genomes_project 2 102063904 102065271 - Accsl protein_coding processed_transcript MGP_CBAJ_T0055941.1 MGP_CBAJ_G0025879.1 mouse_genomes_project 2 102069582 102073335 - Accsl protein_coding processed_transcript MGP_CBAJ_T0055942.1 MGP_CBAJ_G0025879.1 mouse_genomes_project 2 102070296 102077678 - Accsl protein_coding processed_transcript MGP_CBAJ_T0055943.1 MGP_CBAJ_G0025879.1 mouse_genomes_project 2 102074393 102077593 - MGP_CBAJ_P0055943 Accsl protein_coding protein_coding MGP_CBAJ_T0055944.1 MGP_CBAJ_G0025879.1 mouse_genomes_project 2 102074393 102077603 - MGP_CBAJ_P0055944 Accsl protein_coding protein_coding MGP_CBAJ_T0055945.1 MGP_CBAJ_G0025879.1 mouse_genomes_project 2 102074545 102077214 - Accsl protein_coding processed_transcript MGP_CBAJ_T0010295.1 MGP_CBAJ_G0008433.1 mouse_genomes_project 2 78127957 78128082 - Gm25960 miRNA miRNA MGP_CBAJ_T0054801.1 MGP_CBAJ_G0025516.1 mouse_genomes_project 2 74505215 74546769 - MGP_CBAJ_P0054801 Ccdc173 protein_coding protein_coding MGP_CBAJ_T0054802.1 MGP_CBAJ_G0025516.1 mouse_genomes_project 2 74534416 74535474 - Ccdc173 protein_coding processed_transcript MGP_CBAJ_T0057389.1 MGP_CBAJ_G0026222.1 mouse_genomes_project 2 143961490 143978494 - MGP_CBAJ_P0057389 1700037H04Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0057390.1 MGP_CBAJ_G0026222.1 mouse_genomes_project 2 143961491 143964195 - 1700037H04Rik protein_coding retained_intron MGP_CBAJ_T0057391.1 MGP_CBAJ_G0026222.1 mouse_genomes_project 2 143961491 143978480 - MGP_CBAJ_P0057391 1700037H04Rik protein_coding protein_coding MGP_CBAJ_T0057392.1 MGP_CBAJ_G0026222.1 mouse_genomes_project 2 143961960 143978484 - MGP_CBAJ_P0057392 1700037H04Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0057393.1 MGP_CBAJ_G0026222.1 mouse_genomes_project 2 143961970 143978541 - MGP_CBAJ_P0057393 1700037H04Rik protein_coding protein_coding MGP_CBAJ_T0057394.1 MGP_CBAJ_G0026222.1 mouse_genomes_project 2 143962327 143978502 - MGP_CBAJ_P0057394 1700037H04Rik protein_coding protein_coding MGP_CBAJ_T0057395.1 MGP_CBAJ_G0026222.1 mouse_genomes_project 2 143963447 143978502 - 1700037H04Rik protein_coding processed_transcript MGP_CBAJ_T0013432.1 MGP_CBAJ_G0011544.1 mouse_genomes_project 2 82921828 82922242 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013342.1 MGP_CBAJ_G0011454.1 mouse_genomes_project 2 48674550 48674900 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004104.1 MGP_CBAJ_G0003624.1 mouse_genomes_project 2 191427270 191433976 + Ctcflos antisense antisense MGP_CBAJ_T0004105.1 MGP_CBAJ_G0003624.1 mouse_genomes_project 2 191427287 191456824 + Ctcflos antisense antisense MGP_CBAJ_T0004106.1 MGP_CBAJ_G0003624.1 mouse_genomes_project 2 191442279 191453864 + Ctcflos antisense antisense MGP_CBAJ_T0004107.1 MGP_CBAJ_G0003624.1 mouse_genomes_project 2 191447199 191457758 + Ctcflos antisense antisense MGP_CBAJ_T0100410.1 MGP_CBAJ_G0038665.1 mouse_genomes_project 2 166345564 166345700 - snoRNA snoRNA MGP_CBAJ_T0013364.1 MGP_CBAJ_G0011476.1 mouse_genomes_project 2 56563554 56564000 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013276.1 MGP_CBAJ_G0011388.1 mouse_genomes_project 2 20388276 20388612 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099108.1 MGP_CBAJ_G0037363.1 mouse_genomes_project 2 76436835 76436936 - Gm23166 snRNA snRNA MGP_CBAJ_T0007086.1 MGP_CBAJ_G0005804.1 mouse_genomes_project 2 38190854 38191731 - Gm13434 lincRNA lincRNA MGP_CBAJ_T0058576.1 MGP_CBAJ_G0026494.1 mouse_genomes_project 2 174802472 174821017 + MGP_CBAJ_P0058576 Fam83d protein_coding protein_coding MGP_CBAJ_T0058577.1 MGP_CBAJ_G0026494.1 mouse_genomes_project 2 174815787 174821017 + Fam83d protein_coding retained_intron MGP_CBAJ_T0013300.1 MGP_CBAJ_G0011412.1 mouse_genomes_project 2 31948099 31948894 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055393.1 MGP_CBAJ_G0025669.1 mouse_genomes_project 2 92866867 92869401 - MGP_CBAJ_P0055393 Olfr1045 protein_coding protein_coding MGP_CBAJ_T0055031.1 MGP_CBAJ_G0025559.1 mouse_genomes_project 2 80044491 80047182 + MGP_CBAJ_P0055031 Hoxd12 protein_coding protein_coding MGP_CBAJ_T0003988.1 MGP_CBAJ_G0003533.1 mouse_genomes_project 2 126313539 126339111 - Gm13977 antisense antisense MGP_CBAJ_T0058805.1 MGP_CBAJ_G0026565.1 mouse_genomes_project 2 181528369 181550992 + MGP_CBAJ_P0058805 Dnttip1 protein_coding protein_coding MGP_CBAJ_T0058806.1 MGP_CBAJ_G0026565.1 mouse_genomes_project 2 181528400 181533781 + MGP_CBAJ_P0058806 Dnttip1 protein_coding protein_coding MGP_CBAJ_T0058807.1 MGP_CBAJ_G0026565.1 mouse_genomes_project 2 181528417 181543945 + MGP_CBAJ_P0058807 Dnttip1 protein_coding protein_coding MGP_CBAJ_T0058808.1 MGP_CBAJ_G0026565.1 mouse_genomes_project 2 181536531 181541944 + Dnttip1 protein_coding retained_intron MGP_CBAJ_T0017563.1 MGP_CBAJ_G0015191.1 mouse_genomes_project 2 102685737 102691266 + 2810002D19Rik processed_transcript processed_transcript MGP_CBAJ_T0010340.1 MGP_CBAJ_G0008478.1 mouse_genomes_project 2 160090072 160090260 + Gm25026 miRNA miRNA MGP_CBAJ_T0007155.1 MGP_CBAJ_G0005863.1 mouse_genomes_project 2 99070896 99072103 + A330069E16Rik lincRNA lincRNA MGP_CBAJ_T0058641.1 MGP_CBAJ_G0026507.1 mouse_genomes_project 2 179408258 179416725 + Srsf6 protein_coding retained_intron MGP_CBAJ_T0058642.1 MGP_CBAJ_G0026507.1 mouse_genomes_project 2 179408258 179418641 + MGP_CBAJ_P0058642 Srsf6 protein_coding protein_coding MGP_CBAJ_T0058643.1 MGP_CBAJ_G0026507.1 mouse_genomes_project 2 179408292 179416543 + MGP_CBAJ_P0058643 Srsf6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058644.1 MGP_CBAJ_G0026507.1 mouse_genomes_project 2 179408391 179410236 + MGP_CBAJ_P0058644 Srsf6 protein_coding protein_coding MGP_CBAJ_T0011367.1 MGP_CBAJ_G0009505.1 mouse_genomes_project 2 42116896 42117066 - Gm27348 misc_RNA misc_RNA MGP_CBAJ_T0056005.1 MGP_CBAJ_G0025893.1 mouse_genomes_project 2 111054550 111300718 - MGP_CBAJ_P0056005 Ldlrad3 protein_coding protein_coding MGP_CBAJ_T0056006.1 MGP_CBAJ_G0025893.1 mouse_genomes_project 2 111054550 111300691 - MGP_CBAJ_P0056006 Ldlrad3 protein_coding protein_coding MGP_CBAJ_T0056007.1 MGP_CBAJ_G0025893.1 mouse_genomes_project 2 111218211 111245192 - Ldlrad3 protein_coding processed_transcript MGP_CBAJ_T0055437.1 MGP_CBAJ_G0025712.1 mouse_genomes_project 2 94366449 94367394 + MGP_CBAJ_P0055437 Olfr1120 protein_coding protein_coding MGP_CBAJ_T0055912.1 MGP_CBAJ_G0025876.1 mouse_genomes_project 2 101827953 101873231 + MGP_CBAJ_P0055912 Alx4 protein_coding protein_coding MGP_CBAJ_T0055913.1 MGP_CBAJ_G0025876.1 mouse_genomes_project 2 101827957 101873231 + MGP_CBAJ_P0055913 Alx4 protein_coding protein_coding MGP_CBAJ_T0013638.1 MGP_CBAJ_G0011750.1 mouse_genomes_project 2 166739795 166740934 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057941.1 MGP_CBAJ_G0026364.1 mouse_genomes_project 2 167636901 167639102 + MGP_CBAJ_P0057941 Defb21 protein_coding protein_coding MGP_CBAJ_T0004044.1 MGP_CBAJ_G0003574.1 mouse_genomes_project 2 161567681 161739899 + antisense antisense MGP_CBAJ_T0054716.1 MGP_CBAJ_G0025497.1 mouse_genomes_project 2 70846625 71026536 - MGP_CBAJ_P0054716 Scn9a protein_coding protein_coding MGP_CBAJ_T0054717.1 MGP_CBAJ_G0025497.1 mouse_genomes_project 2 70846625 71026536 - MGP_CBAJ_P0054717 Scn9a protein_coding protein_coding MGP_CBAJ_T0054718.1 MGP_CBAJ_G0025497.1 mouse_genomes_project 2 70846625 71026835 - MGP_CBAJ_P0054718 Scn9a protein_coding protein_coding MGP_CBAJ_T0054719.1 MGP_CBAJ_G0025497.1 mouse_genomes_project 2 70846625 71026536 - MGP_CBAJ_P0054719 Scn9a protein_coding protein_coding MGP_CBAJ_T0054720.1 MGP_CBAJ_G0025497.1 mouse_genomes_project 2 70846625 71026835 - MGP_CBAJ_P0054720 Scn9a protein_coding protein_coding MGP_CBAJ_T0054721.1 MGP_CBAJ_G0025497.1 mouse_genomes_project 2 70909507 70912668 - Scn9a protein_coding retained_intron MGP_CBAJ_T0054722.1 MGP_CBAJ_G0025497.1 mouse_genomes_project 2 70936593 71026845 - Scn9a protein_coding retained_intron MGP_CBAJ_T0007335.1 MGP_CBAJ_G0006010.1 mouse_genomes_project 2 199787115 199854754 - Gm14342 lincRNA lincRNA MGP_CBAJ_T0013281.1 MGP_CBAJ_G0011393.1 mouse_genomes_project 2 22058393 22058933 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007100.1 MGP_CBAJ_G0005817.1 mouse_genomes_project 2 54076228 54078502 - Gm13499 lincRNA lincRNA MGP_CBAJ_T0056265.1 MGP_CBAJ_G0025948.1 mouse_genomes_project 2 121230038 121247606 - MGP_CBAJ_P0056265 Gm15130 protein_coding protein_coding MGP_CBAJ_T0057077.1 MGP_CBAJ_G0026146.1 mouse_genomes_project 2 139325029 139354552 + Ap4e1 protein_coding retained_intron MGP_CBAJ_T0057078.1 MGP_CBAJ_G0026146.1 mouse_genomes_project 2 139325033 139329865 + Ap4e1 protein_coding retained_intron MGP_CBAJ_T0057079.1 MGP_CBAJ_G0026146.1 mouse_genomes_project 2 139325036 139367033 + MGP_CBAJ_P0057079 Ap4e1 protein_coding protein_coding MGP_CBAJ_T0057080.1 MGP_CBAJ_G0026146.1 mouse_genomes_project 2 139325042 139392792 + MGP_CBAJ_P0057080 Ap4e1 protein_coding protein_coding MGP_CBAJ_T0057081.1 MGP_CBAJ_G0026146.1 mouse_genomes_project 2 139325064 139345983 + MGP_CBAJ_P0057081 Ap4e1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057082.1 MGP_CBAJ_G0026146.1 mouse_genomes_project 2 139325066 139369390 + MGP_CBAJ_P0057082 Ap4e1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057083.1 MGP_CBAJ_G0026146.1 mouse_genomes_project 2 139325066 139385425 + MGP_CBAJ_P0057083 Ap4e1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057084.1 MGP_CBAJ_G0026146.1 mouse_genomes_project 2 139371554 139385254 + MGP_CBAJ_P0057084 Ap4e1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052779.1 MGP_CBAJ_G0025158.1 mouse_genomes_project 2 24897111 24916949 + MGP_CBAJ_P0052779 Abca2 protein_coding protein_coding MGP_CBAJ_T0052780.1 MGP_CBAJ_G0025158.1 mouse_genomes_project 2 24909716 24911326 + Abca2 protein_coding processed_transcript MGP_CBAJ_T0052781.1 MGP_CBAJ_G0025158.1 mouse_genomes_project 2 24911356 24912222 + Abca2 protein_coding processed_transcript MGP_CBAJ_T0052782.1 MGP_CBAJ_G0025158.1 mouse_genomes_project 2 24913570 24915274 + Abca2 protein_coding processed_transcript MGP_CBAJ_T0052783.1 MGP_CBAJ_G0025158.1 mouse_genomes_project 2 24914073 24915476 + Abca2 protein_coding processed_transcript MGP_CBAJ_T0052784.1 MGP_CBAJ_G0025158.1 mouse_genomes_project 2 24914230 24914951 + Abca2 protein_coding processed_transcript MGP_CBAJ_T0052785.1 MGP_CBAJ_G0025158.1 mouse_genomes_project 2 24914251 24914885 + Abca2 protein_coding processed_transcript MGP_CBAJ_T0001021.1 MGP_CBAJ_G0000953.1 mouse_genomes_project 2 14015483 14017225 + TEC TEC MGP_CBAJ_T0058435.1 MGP_CBAJ_G0026466.1 mouse_genomes_project 2 172688534 172776662 - MGP_CBAJ_P0058435 Ndrg3 protein_coding protein_coding MGP_CBAJ_T0058436.1 MGP_CBAJ_G0026466.1 mouse_genomes_project 2 172688534 172776675 - MGP_CBAJ_P0058436 Ndrg3 protein_coding protein_coding MGP_CBAJ_T0058437.1 MGP_CBAJ_G0026466.1 mouse_genomes_project 2 172689592 172722251 - Ndrg3 protein_coding processed_transcript MGP_CBAJ_T0058438.1 MGP_CBAJ_G0026466.1 mouse_genomes_project 2 172689889 172776712 - MGP_CBAJ_P0058438 Ndrg3 protein_coding unknown_likely_coding MGP_CBAJ_T0058439.1 MGP_CBAJ_G0026466.1 mouse_genomes_project 2 172692341 172701376 - Ndrg3 protein_coding processed_transcript MGP_CBAJ_T0058440.1 MGP_CBAJ_G0026466.1 mouse_genomes_project 2 172700673 172776654 - MGP_CBAJ_P0058440 Ndrg3 protein_coding protein_coding MGP_CBAJ_T0058441.1 MGP_CBAJ_G0026466.1 mouse_genomes_project 2 172715713 172732861 - Ndrg3 protein_coding processed_transcript MGP_CBAJ_T0058442.1 MGP_CBAJ_G0026466.1 mouse_genomes_project 2 172724192 172776619 - Ndrg3 protein_coding processed_transcript MGP_CBAJ_T0058443.1 MGP_CBAJ_G0026466.1 mouse_genomes_project 2 172727730 172776546 - Ndrg3 protein_coding processed_transcript MGP_CBAJ_T0058444.1 MGP_CBAJ_G0026466.1 mouse_genomes_project 2 172735808 172776666 - Ndrg3 protein_coding retained_intron MGP_CBAJ_T0058445.1 MGP_CBAJ_G0026466.1 mouse_genomes_project 2 172749517 172776615 - Ndrg3 protein_coding processed_transcript MGP_CBAJ_T0004073.1 MGP_CBAJ_G0003601.1 mouse_genomes_project 2 179983158 179983725 + 2900093K20Rik antisense antisense MGP_CBAJ_T0003878.1 MGP_CBAJ_G0003461.1 mouse_genomes_project 2 33879555 33883507 + Gm13528 antisense antisense MGP_CBAJ_T0100349.1 MGP_CBAJ_G0038604.1 mouse_genomes_project 2 26617885 26617956 + Gm24134 snoRNA snoRNA MGP_CBAJ_T0003980.1 MGP_CBAJ_G0003529.1 mouse_genomes_project 2 123939392 123941016 - Gm13966 antisense antisense MGP_CBAJ_T0013363.1 MGP_CBAJ_G0011475.1 mouse_genomes_project 2 56398457 56399436 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007252.1 MGP_CBAJ_G0005940.1 mouse_genomes_project 2 163898736 163903594 + Gm14135 lincRNA lincRNA MGP_CBAJ_T0059116.1 MGP_CBAJ_G0026624.1 mouse_genomes_project 2 186329731 186351444 - MGP_CBAJ_P0059116 Sall4 protein_coding protein_coding MGP_CBAJ_T0059117.1 MGP_CBAJ_G0026624.1 mouse_genomes_project 2 186329731 186351444 - MGP_CBAJ_P0059117 Sall4 protein_coding protein_coding MGP_CBAJ_T0059118.1 MGP_CBAJ_G0026624.1 mouse_genomes_project 2 186329731 186351272 - MGP_CBAJ_P0059118 Sall4 protein_coding protein_coding MGP_CBAJ_T0059119.1 MGP_CBAJ_G0026624.1 mouse_genomes_project 2 186336321 186337350 - MGP_CBAJ_P0059119 Sall4 protein_coding protein_coding MGP_CBAJ_T0059120.1 MGP_CBAJ_G0026624.1 mouse_genomes_project 2 186337587 186349489 - MGP_CBAJ_P0059120 Sall4 protein_coding protein_coding MGP_CBAJ_T0059121.1 MGP_CBAJ_G0026624.1 mouse_genomes_project 2 186338020 186352186 - Sall4 protein_coding processed_transcript MGP_CBAJ_T0059122.1 MGP_CBAJ_G0026624.1 mouse_genomes_project 2 186338159 186351360 - Sall4 protein_coding processed_transcript MGP_CBAJ_T0007131.1 MGP_CBAJ_G0005843.1 mouse_genomes_project 2 79477044 79495035 + Gm13667 lincRNA lincRNA MGP_CBAJ_T0013496.1 MGP_CBAJ_G0011608.1 mouse_genomes_project 2 104058991 104059109 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013434.1 MGP_CBAJ_G0011546.1 mouse_genomes_project 2 83008279 83008885 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007123.1 MGP_CBAJ_G0005838.1 mouse_genomes_project 2 77900607 77973459 - 6430710C18Rik lincRNA lincRNA MGP_CBAJ_T0007124.1 MGP_CBAJ_G0005838.1 mouse_genomes_project 2 77901266 77905601 - 6430710C18Rik lincRNA lincRNA MGP_CBAJ_T0007125.1 MGP_CBAJ_G0005838.1 mouse_genomes_project 2 77943262 77973504 - 6430710C18Rik lincRNA lincRNA MGP_CBAJ_T0007126.1 MGP_CBAJ_G0005838.1 mouse_genomes_project 2 77943579 77958735 - 6430710C18Rik lincRNA lincRNA MGP_CBAJ_T0052574.1 MGP_CBAJ_G0025124.1 mouse_genomes_project 2 24146358 24269975 - MGP_CBAJ_P0052574 Ehmt1 protein_coding protein_coding MGP_CBAJ_T0052575.1 MGP_CBAJ_G0025124.1 mouse_genomes_project 2 24146706 24161914 - MGP_CBAJ_P0052575 Ehmt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052576.1 MGP_CBAJ_G0025124.1 mouse_genomes_project 2 24147513 24297516 - MGP_CBAJ_P0052576 Ehmt1 protein_coding protein_coding MGP_CBAJ_T0052577.1 MGP_CBAJ_G0025124.1 mouse_genomes_project 2 24160791 24189066 - Ehmt1 protein_coding retained_intron MGP_CBAJ_T0052578.1 MGP_CBAJ_G0025124.1 mouse_genomes_project 2 24161828 24209563 - MGP_CBAJ_P0052578 Ehmt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052579.1 MGP_CBAJ_G0025124.1 mouse_genomes_project 2 24161886 24162841 - Ehmt1 protein_coding processed_transcript MGP_CBAJ_T0052580.1 MGP_CBAJ_G0025124.1 mouse_genomes_project 2 24187002 24297490 - MGP_CBAJ_P0052580 Ehmt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052581.1 MGP_CBAJ_G0025124.1 mouse_genomes_project 2 24188646 24222700 - MGP_CBAJ_P0052581 Ehmt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052582.1 MGP_CBAJ_G0025124.1 mouse_genomes_project 2 24205073 24297479 - Ehmt1 protein_coding retained_intron MGP_CBAJ_T0052583.1 MGP_CBAJ_G0025124.1 mouse_genomes_project 2 24217998 24249833 - MGP_CBAJ_P0052583 Ehmt1 protein_coding protein_coding MGP_CBAJ_T0052584.1 MGP_CBAJ_G0025124.1 mouse_genomes_project 2 24236185 24262990 - MGP_CBAJ_P0052584 Ehmt1 protein_coding protein_coding MGP_CBAJ_T0052585.1 MGP_CBAJ_G0025124.1 mouse_genomes_project 2 24236254 24297507 - MGP_CBAJ_P0052585 Ehmt1 protein_coding protein_coding MGP_CBAJ_T0052586.1 MGP_CBAJ_G0025124.1 mouse_genomes_project 2 24236851 24297498 - MGP_CBAJ_P0052586 Ehmt1 protein_coding protein_coding MGP_CBAJ_T0101833.1 MGP_CBAJ_G0039864.1 mouse_genomes_project 2 168995763 169039405 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0100355.1 MGP_CBAJ_G0038610.1 mouse_genomes_project 2 33657147 33657277 + Snora65 snoRNA snoRNA MGP_CBAJ_T0058739.1 MGP_CBAJ_G0026536.1 mouse_genomes_project 2 180856619 180859157 - MGP_CBAJ_P0058739 Svs2 protein_coding protein_coding MGP_CBAJ_T0058740.1 MGP_CBAJ_G0026536.1 mouse_genomes_project 2 180857218 180858955 - MGP_CBAJ_P0058740 Svs2 protein_coding protein_coding MGP_CBAJ_T0010338.1 MGP_CBAJ_G0008476.1 mouse_genomes_project 2 152357238 152357317 + Mir1952 miRNA miRNA MGP_CBAJ_T0004072.1 MGP_CBAJ_G0003600.1 mouse_genomes_project 2 178814936 178818066 + Ptprtos antisense antisense MGP_CBAJ_T0013318.1 MGP_CBAJ_G0011430.1 mouse_genomes_project 2 38620226 38620996 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001012.1 MGP_CBAJ_G0000944.1 mouse_genomes_project 2 12531631 12531772 - TEC TEC MGP_CBAJ_T0101775.1 MGP_CBAJ_G0039806.1 mouse_genomes_project 2 21684332 21684823 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0058236.1 MGP_CBAJ_G0026439.1 mouse_genomes_project 2 171375673 171377361 - MGP_CBAJ_P0058236 BC029722 protein_coding protein_coding MGP_CBAJ_T0056317.1 MGP_CBAJ_G0025987.1 mouse_genomes_project 2 122852297 122872600 + MGP_CBAJ_P0056317 Emc7 protein_coding protein_coding MGP_CBAJ_T0007315.1 MGP_CBAJ_G0005992.1 mouse_genomes_project 2 187156030 187164749 - 4930529I22Rik lincRNA lincRNA MGP_CBAJ_T0010272.1 MGP_CBAJ_G0008410.1 mouse_genomes_project 2 32567194 32567257 + Mir7674 miRNA miRNA MGP_CBAJ_T0013562.1 MGP_CBAJ_G0011674.1 mouse_genomes_project 2 133238167 133238846 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007312.1 MGP_CBAJ_G0005989.1 mouse_genomes_project 2 186811971 186815928 + Gm14258 lincRNA lincRNA MGP_CBAJ_T0007139.1 MGP_CBAJ_G0005849.1 mouse_genomes_project 2 80556534 80571946 - Gm13652 lincRNA lincRNA MGP_CBAJ_T0013373.1 MGP_CBAJ_G0011485.1 mouse_genomes_project 2 60580805 60580994 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0052327.1 MGP_CBAJ_G0025078.1 mouse_genomes_project 2 13507174 13540321 + MGP_CBAJ_P0052327 Arl5b protein_coding protein_coding MGP_CBAJ_T0052329.1 MGP_CBAJ_G0025078.1 mouse_genomes_project 2 13513019 13540325 + MGP_CBAJ_P0052329 Arl5b protein_coding protein_coding MGP_CBAJ_T0052330.1 MGP_CBAJ_G0025078.1 mouse_genomes_project 2 13513066 13534464 + MGP_CBAJ_P0052330 Arl5b protein_coding nonsense_mediated_decay MGP_CBAJ_T0052331.1 MGP_CBAJ_G0025078.1 mouse_genomes_project 2 13513126 13535440 + MGP_CBAJ_P0052331 Arl5b protein_coding protein_coding MGP_CBAJ_T0052332.1 MGP_CBAJ_G0025078.1 mouse_genomes_project 2 13526007 13534474 + MGP_CBAJ_P0052332 Arl5b protein_coding nonsense_mediated_decay MGP_CBAJ_T0052333.1 MGP_CBAJ_G0025078.1 mouse_genomes_project 2 13527830 13531040 + Arl5b protein_coding retained_intron MGP_CBAJ_T0052334.1 MGP_CBAJ_G0025078.1 mouse_genomes_project 2 13532867 13540321 + MGP_CBAJ_P0052334 Arl5b protein_coding protein_coding MGP_CBAJ_T0003962.1 MGP_CBAJ_G0003520.1 mouse_genomes_project 2 111144699 111172460 + Gm13919 antisense antisense MGP_CBAJ_T0003963.1 MGP_CBAJ_G0003520.1 mouse_genomes_project 2 111144707 111147332 + Gm13919 antisense antisense MGP_CBAJ_T0054188.1 MGP_CBAJ_G0025411.1 mouse_genomes_project 2 38935012 38959968 + MGP_CBAJ_P0054188 Crb2 protein_coding protein_coding MGP_CBAJ_T0054189.1 MGP_CBAJ_G0025411.1 mouse_genomes_project 2 38952016 38954369 + MGP_CBAJ_P0054189 Crb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054190.1 MGP_CBAJ_G0025411.1 mouse_genomes_project 2 38956032 38957481 + Crb2 protein_coding processed_transcript MGP_CBAJ_T0004059.1 MGP_CBAJ_G0003588.1 mouse_genomes_project 2 171127029 171130508 + antisense antisense MGP_CBAJ_T0004060.1 MGP_CBAJ_G0003588.1 mouse_genomes_project 2 171129564 171130494 + antisense antisense MGP_CBAJ_T0003821.1 MGP_CBAJ_G0003416.1 mouse_genomes_project 2 7697123 7698817 + Gm13256 antisense antisense MGP_CBAJ_T0101814.1 MGP_CBAJ_G0039845.1 mouse_genomes_project 2 95588399 95590579 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0053036.1 MGP_CBAJ_G0025205.1 mouse_genomes_project 2 26197774 26213135 - Agpat2 protein_coding processed_transcript MGP_CBAJ_T0053037.1 MGP_CBAJ_G0025205.1 mouse_genomes_project 2 26197774 26213256 - MGP_CBAJ_P0053037 Agpat2 protein_coding protein_coding MGP_CBAJ_T0053038.1 MGP_CBAJ_G0025205.1 mouse_genomes_project 2 26199220 26213341 - Agpat2 protein_coding processed_transcript MGP_CBAJ_T0053039.1 MGP_CBAJ_G0025205.1 mouse_genomes_project 2 26200835 26212640 - Agpat2 protein_coding processed_transcript MGP_CBAJ_T0053040.1 MGP_CBAJ_G0025205.1 mouse_genomes_project 2 26201158 26212850 - MGP_CBAJ_P0053040 Agpat2 protein_coding protein_coding MGP_CBAJ_T0007322.1 MGP_CBAJ_G0005998.1 mouse_genomes_project 2 189219355 189300190 + Gm14266 lincRNA lincRNA MGP_CBAJ_T0007325.1 MGP_CBAJ_G0005998.1 mouse_genomes_project 2 189282226 189302354 + Gm14266 lincRNA lincRNA MGP_CBAJ_T0013282.1 MGP_CBAJ_G0011394.1 mouse_genomes_project 2 22179754 22180291 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007140.1 MGP_CBAJ_G0005850.1 mouse_genomes_project 2 80581158 80611663 - A330043C09Rik lincRNA lincRNA MGP_CBAJ_T0013416.1 MGP_CBAJ_G0011528.1 mouse_genomes_project 2 77461112 77461408 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098014.1 MGP_CBAJ_G0036287.1 mouse_genomes_project 2 80343721 80343821 - n-R5s198 rRNA rRNA MGP_CBAJ_T0053642.1 MGP_CBAJ_G0025305.1 mouse_genomes_project 2 32446899 32479204 + MGP_CBAJ_P0053642 Aif1l protein_coding protein_coding MGP_CBAJ_T0053643.1 MGP_CBAJ_G0025305.1 mouse_genomes_project 2 32446952 32476985 + MGP_CBAJ_P0053643 Aif1l protein_coding protein_coding MGP_CBAJ_T0053644.1 MGP_CBAJ_G0025305.1 mouse_genomes_project 2 32447081 32475508 + Aif1l protein_coding retained_intron MGP_CBAJ_T0053645.1 MGP_CBAJ_G0025305.1 mouse_genomes_project 2 32447135 32477091 + Aif1l protein_coding retained_intron MGP_CBAJ_T0053646.1 MGP_CBAJ_G0025305.1 mouse_genomes_project 2 32463718 32476777 + Aif1l protein_coding processed_transcript MGP_CBAJ_T0053647.1 MGP_CBAJ_G0025305.1 mouse_genomes_project 2 32464699 32475504 + Aif1l protein_coding processed_transcript MGP_CBAJ_T0053648.1 MGP_CBAJ_G0025305.1 mouse_genomes_project 2 32465289 32476701 + Aif1l protein_coding retained_intron MGP_CBAJ_T0053649.1 MGP_CBAJ_G0025305.1 mouse_genomes_project 2 32466627 32476748 + Aif1l protein_coding processed_transcript MGP_CBAJ_T0053650.1 MGP_CBAJ_G0025305.1 mouse_genomes_project 2 32475077 32476908 + Aif1l protein_coding retained_intron MGP_CBAJ_T0007270.1 MGP_CBAJ_G0005954.1 mouse_genomes_project 2 172299981 172300984 - Gm14174 lincRNA lincRNA MGP_CBAJ_T0010225.1 MGP_CBAJ_G0008363.1 mouse_genomes_project 2 8384309 8384382 + Mir466 miRNA miRNA MGP_CBAJ_T0055461.1 MGP_CBAJ_G0025727.1 mouse_genomes_project 2 94754438 94755371 - MGP_CBAJ_P0055461 Olfr1135 protein_coding protein_coding MGP_CBAJ_T0055573.1 MGP_CBAJ_G0025817.1 mouse_genomes_project 2 97615039 97616114 + MGP_CBAJ_P0055573 Olfr1262 protein_coding protein_coding MGP_CBAJ_T0057943.1 MGP_CBAJ_G0026366.1 mouse_genomes_project 2 167658966 167665172 - Defb45 protein_coding processed_transcript MGP_CBAJ_T0057944.1 MGP_CBAJ_G0026366.1 mouse_genomes_project 2 167658966 167662255 - MGP_CBAJ_P0057944 Defb45 protein_coding protein_coding MGP_CBAJ_T0055626.1 MGP_CBAJ_G0025833.1 mouse_genomes_project 2 98664594 98669260 + MGP_CBAJ_P0055626 C1qtnf4 protein_coding protein_coding MGP_CBAJ_T0054146.1 MGP_CBAJ_G0025400.1 mouse_genomes_project 2 38259573 38265386 + MGP_CBAJ_P0054146 protein_coding protein_coding MGP_CBAJ_T0013627.1 MGP_CBAJ_G0011739.1 mouse_genomes_project 2 162589073 162589567 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055413.1 MGP_CBAJ_G0025688.1 mouse_genomes_project 2 93597167 93598109 - MGP_CBAJ_P0055413 Olfr1090 protein_coding protein_coding MGP_CBAJ_T0052836.1 MGP_CBAJ_G0025167.1 mouse_genomes_project 2 25042478 25050570 - MGP_CBAJ_P0052836 Mamdc4 protein_coding protein_coding MGP_CBAJ_T0052837.1 MGP_CBAJ_G0025167.1 mouse_genomes_project 2 25042500 25050612 - MGP_CBAJ_P0052837 Mamdc4 protein_coding protein_coding MGP_CBAJ_T0052838.1 MGP_CBAJ_G0025167.1 mouse_genomes_project 2 25042673 25049508 - MGP_CBAJ_P0052838 Mamdc4 protein_coding protein_coding MGP_CBAJ_T0052839.1 MGP_CBAJ_G0025167.1 mouse_genomes_project 2 25047711 25048739 - Mamdc4 protein_coding processed_transcript MGP_CBAJ_T0052840.1 MGP_CBAJ_G0025167.1 mouse_genomes_project 2 25047755 25048369 - Mamdc4 protein_coding processed_transcript MGP_CBAJ_T0052841.1 MGP_CBAJ_G0025167.1 mouse_genomes_project 2 25049427 25054087 - Mamdc4 protein_coding processed_transcript MGP_CBAJ_T0013501.1 MGP_CBAJ_G0011613.1 mouse_genomes_project 2 106936469 106936641 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007142.1 MGP_CBAJ_G0005852.1 mouse_genomes_project 2 80912050 80917863 - Gm13660 lincRNA lincRNA MGP_CBAJ_T0054991.1 MGP_CBAJ_G0025553.1 mouse_genomes_project 2 78873485 78922484 - MGP_CBAJ_P0054991 Chn1 protein_coding protein_coding MGP_CBAJ_T0054992.1 MGP_CBAJ_G0025553.1 mouse_genomes_project 2 78873493 79051616 - MGP_CBAJ_P0054992 Chn1 protein_coding protein_coding MGP_CBAJ_T0054993.1 MGP_CBAJ_G0025553.1 mouse_genomes_project 2 78873493 79051616 - MGP_CBAJ_P0054993 Chn1 protein_coding protein_coding MGP_CBAJ_T0054994.1 MGP_CBAJ_G0025553.1 mouse_genomes_project 2 78875917 78986098 - MGP_CBAJ_P0054994 Chn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054995.1 MGP_CBAJ_G0025553.1 mouse_genomes_project 2 78890271 78917611 - MGP_CBAJ_P0054995 Chn1 protein_coding protein_coding MGP_CBAJ_T0054996.1 MGP_CBAJ_G0025553.1 mouse_genomes_project 2 78890989 79051596 - MGP_CBAJ_P0054996 Chn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054997.1 MGP_CBAJ_G0025553.1 mouse_genomes_project 2 78942634 79051341 - MGP_CBAJ_P0054997 Chn1 protein_coding protein_coding MGP_CBAJ_T0099097.1 MGP_CBAJ_G0037352.1 mouse_genomes_project 2 30024809 30024906 - Gm23865 snRNA snRNA MGP_CBAJ_T0004003.1 MGP_CBAJ_G0003548.1 mouse_genomes_project 2 141733687 141762991 - AI847159 antisense antisense MGP_CBAJ_T0004004.1 MGP_CBAJ_G0003548.1 mouse_genomes_project 2 141760506 141762991 - AI847159 antisense antisense MGP_CBAJ_T0004005.1 MGP_CBAJ_G0003548.1 mouse_genomes_project 2 141760510 141760900 - AI847159 antisense antisense MGP_CBAJ_T0004006.1 MGP_CBAJ_G0003548.1 mouse_genomes_project 2 141760554 141763026 - AI847159 antisense antisense MGP_CBAJ_T0013424.1 MGP_CBAJ_G0011536.1 mouse_genomes_project 2 79095353 79095617 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001040.1 MGP_CBAJ_G0000972.1 mouse_genomes_project 2 40005747 40006520 - TEC TEC MGP_CBAJ_T0003904.1 MGP_CBAJ_G0003480.1 mouse_genomes_project 2 64119905 64120960 + Gm13580 antisense antisense MGP_CBAJ_T0055154.1 MGP_CBAJ_G0025588.1 mouse_genomes_project 2 84638578 84640985 + MGP_CBAJ_P0055154 Ube2e3 protein_coding protein_coding MGP_CBAJ_T0055155.1 MGP_CBAJ_G0025588.1 mouse_genomes_project 2 84638766 84691369 + MGP_CBAJ_P0055155 Ube2e3 protein_coding protein_coding MGP_CBAJ_T0055156.1 MGP_CBAJ_G0025588.1 mouse_genomes_project 2 84639424 84699292 + MGP_CBAJ_P0055156 Ube2e3 protein_coding protein_coding MGP_CBAJ_T0055157.1 MGP_CBAJ_G0025588.1 mouse_genomes_project 2 84639617 84692181 + Ube2e3 protein_coding retained_intron MGP_CBAJ_T0055158.1 MGP_CBAJ_G0025588.1 mouse_genomes_project 2 84639711 84643137 + Ube2e3 protein_coding retained_intron MGP_CBAJ_T0055159.1 MGP_CBAJ_G0025588.1 mouse_genomes_project 2 84640055 84697915 + MGP_CBAJ_P0055159 Ube2e3 protein_coding protein_coding MGP_CBAJ_T0055160.1 MGP_CBAJ_G0025588.1 mouse_genomes_project 2 84696014 84697670 + Ube2e3 protein_coding retained_intron MGP_CBAJ_T0013614.1 MGP_CBAJ_G0011726.1 mouse_genomes_project 2 159088692 159089513 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100399.1 MGP_CBAJ_G0038654.1 mouse_genomes_project 2 156744251 156744367 + Gm22310 snoRNA snoRNA MGP_CBAJ_T0017628.1 MGP_CBAJ_G0015220.1 mouse_genomes_project 2 165439627 165443649 + Gm14123 processed_transcript processed_transcript MGP_CBAJ_T0055476.1 MGP_CBAJ_G0025741.1 mouse_genomes_project 2 95042192 95043137 - MGP_CBAJ_P0055476 Olfr1155 protein_coding protein_coding MGP_CBAJ_T0004048.1 MGP_CBAJ_G0003578.1 mouse_genomes_project 2 166608545 166615524 - Tmem74bos antisense antisense MGP_CBAJ_T0004049.1 MGP_CBAJ_G0003578.1 mouse_genomes_project 2 166610098 166615248 - Tmem74bos antisense antisense MGP_CBAJ_T0054724.1 MGP_CBAJ_G0025499.1 mouse_genomes_project 2 71890714 71893550 - MGP_CBAJ_P0054724 Gm26727 protein_coding protein_coding MGP_CBAJ_T0004018.1 MGP_CBAJ_G0003558.1 mouse_genomes_project 2 145491077 145514636 + 1700026D11Rik antisense antisense MGP_CBAJ_T0004019.1 MGP_CBAJ_G0003558.1 mouse_genomes_project 2 145491159 145516243 + 1700026D11Rik antisense antisense MGP_CBAJ_T0004020.1 MGP_CBAJ_G0003558.1 mouse_genomes_project 2 145491159 145514677 + 1700026D11Rik antisense antisense MGP_CBAJ_T0004021.1 MGP_CBAJ_G0003558.1 mouse_genomes_project 2 145491171 145526345 + 1700026D11Rik antisense antisense MGP_CBAJ_T0004022.1 MGP_CBAJ_G0003558.1 mouse_genomes_project 2 145491187 145514637 + 1700026D11Rik antisense antisense MGP_CBAJ_T0004023.1 MGP_CBAJ_G0003558.1 mouse_genomes_project 2 145491187 145526238 + 1700026D11Rik antisense antisense MGP_CBAJ_T0001013.1 MGP_CBAJ_G0000945.1 mouse_genomes_project 2 13041319 13043940 + TEC TEC MGP_CBAJ_T0007329.1 MGP_CBAJ_G0006004.1 mouse_genomes_project 2 191773963 191775118 + Gm14642 lincRNA lincRNA MGP_CBAJ_T0059377.1 MGP_CBAJ_G0026697.1 mouse_genomes_project 2 199869442 199895804 - MGP_CBAJ_P0059377 Ythdf1 protein_coding protein_coding MGP_CBAJ_T0059378.1 MGP_CBAJ_G0026697.1 mouse_genomes_project 2 199870438 199895804 - MGP_CBAJ_P0059378 Ythdf1 protein_coding protein_coding MGP_CBAJ_T0059379.1 MGP_CBAJ_G0026697.1 mouse_genomes_project 2 199884198 199895242 - MGP_CBAJ_P0059379 Ythdf1 protein_coding protein_coding MGP_CBAJ_T0055766.1 MGP_CBAJ_G0025851.1 mouse_genomes_project 2 99531745 99542812 - MGP_CBAJ_P0055766 F2 protein_coding protein_coding MGP_CBAJ_T0055767.1 MGP_CBAJ_G0025851.1 mouse_genomes_project 2 99531754 99542805 - MGP_CBAJ_P0055767 F2 protein_coding protein_coding MGP_CBAJ_T0055768.1 MGP_CBAJ_G0025851.1 mouse_genomes_project 2 99537572 99542793 - F2 protein_coding processed_transcript MGP_CBAJ_T0059030.1 MGP_CBAJ_G0026606.1 mouse_genomes_project 2 184577895 184636996 - MGP_CBAJ_P0059030 B4galt5 protein_coding protein_coding MGP_CBAJ_T0059031.1 MGP_CBAJ_G0026606.1 mouse_genomes_project 2 184580645 184590815 - MGP_CBAJ_P0059031 B4galt5 protein_coding protein_coding MGP_CBAJ_T0059032.1 MGP_CBAJ_G0026606.1 mouse_genomes_project 2 184592726 184598972 - B4galt5 protein_coding processed_transcript MGP_CBAJ_T0059033.1 MGP_CBAJ_G0026606.1 mouse_genomes_project 2 184592726 184599017 - B4galt5 protein_coding processed_transcript MGP_CBAJ_T0056011.1 MGP_CBAJ_G0025895.1 mouse_genomes_project 2 111599405 111602539 - MGP_CBAJ_P0056011 Fjx1 protein_coding protein_coding MGP_CBAJ_T0101822.1 MGP_CBAJ_G0039853.1 mouse_genomes_project 2 98147531 98170825 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013643.1 MGP_CBAJ_G0011755.1 mouse_genomes_project 2 168645229 168645511 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007188.1 MGP_CBAJ_G0005889.1 mouse_genomes_project 2 118030351 118132746 - Gm13912 lincRNA lincRNA MGP_CBAJ_T0007264.1 MGP_CBAJ_G0005949.1 mouse_genomes_project 2 170134496 170135796 - Gm14216 lincRNA lincRNA MGP_CBAJ_T0007265.1 MGP_CBAJ_G0005949.1 mouse_genomes_project 2 170134514 170153688 - Gm14216 lincRNA lincRNA MGP_CBAJ_T0013256.1 MGP_CBAJ_G0011368.1 mouse_genomes_project 2 13856525 13857498 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0056427.1 MGP_CBAJ_G0026013.1 mouse_genomes_project 2 129720846 129769366 + MGP_CBAJ_P0056427 Bub1b protein_coding protein_coding MGP_CBAJ_T0056428.1 MGP_CBAJ_G0026013.1 mouse_genomes_project 2 129724720 129734382 + Bub1b protein_coding retained_intron MGP_CBAJ_T0056429.1 MGP_CBAJ_G0026013.1 mouse_genomes_project 2 129754892 129756136 + Bub1b protein_coding retained_intron MGP_CBAJ_T0056430.1 MGP_CBAJ_G0026013.1 mouse_genomes_project 2 129755843 129764523 + Bub1b protein_coding retained_intron MGP_CBAJ_T0055483.1 MGP_CBAJ_G0025748.1 mouse_genomes_project 2 95162558 95163500 - MGP_CBAJ_P0055483 Olfr73 protein_coding protein_coding MGP_CBAJ_T0052415.1 MGP_CBAJ_G0025094.1 mouse_genomes_project 2 18410269 18412108 + MGP_CBAJ_P0052415 Ptf1a protein_coding protein_coding MGP_CBAJ_T0056126.1 MGP_CBAJ_G0025916.1 mouse_genomes_project 2 113990047 114079201 + MGP_CBAJ_P0056126 Cstf3 protein_coding protein_coding MGP_CBAJ_T0056127.1 MGP_CBAJ_G0025916.1 mouse_genomes_project 2 113990056 114019516 + Cstf3 protein_coding retained_intron MGP_CBAJ_T0056128.1 MGP_CBAJ_G0025916.1 mouse_genomes_project 2 113990151 114017539 + Cstf3 protein_coding retained_intron MGP_CBAJ_T0056129.1 MGP_CBAJ_G0025916.1 mouse_genomes_project 2 114032197 114074570 + MGP_CBAJ_P0056129 Cstf3 protein_coding unknown_likely_coding MGP_CBAJ_T0056130.1 MGP_CBAJ_G0025916.1 mouse_genomes_project 2 114069461 114077210 + Cstf3 protein_coding processed_transcript MGP_CBAJ_T0056132.1 MGP_CBAJ_G0025916.1 mouse_genomes_project 2 114076909 114077951 + Cstf3 protein_coding processed_transcript MGP_CBAJ_T0056133.1 MGP_CBAJ_G0025916.1 mouse_genomes_project 2 114077437 114078511 + Cstf3 protein_coding processed_transcript MGP_CBAJ_T0057507.1 MGP_CBAJ_G0026245.1 mouse_genomes_project 2 145859890 145866311 - Trmt6 protein_coding retained_intron MGP_CBAJ_T0057508.1 MGP_CBAJ_G0026245.1 mouse_genomes_project 2 145859890 145871727 - Trmt6 protein_coding processed_transcript MGP_CBAJ_T0057509.1 MGP_CBAJ_G0026245.1 mouse_genomes_project 2 145859890 145871726 - MGP_CBAJ_P0057509 Trmt6 protein_coding protein_coding MGP_CBAJ_T0057510.1 MGP_CBAJ_G0026245.1 mouse_genomes_project 2 145866092 145871430 - Trmt6 protein_coding processed_transcript MGP_CBAJ_T0057511.1 MGP_CBAJ_G0026245.1 mouse_genomes_project 2 145866117 145868177 - Trmt6 protein_coding processed_transcript MGP_CBAJ_T0057512.1 MGP_CBAJ_G0026245.1 mouse_genomes_project 2 145867435 145871685 - Trmt6 protein_coding processed_transcript MGP_CBAJ_T0007052.1 MGP_CBAJ_G0005780.1 mouse_genomes_project 2 23630978 23631511 + Gm13411 lincRNA lincRNA MGP_CBAJ_T0004102.1 MGP_CBAJ_G0003622.1 mouse_genomes_project 2 190504331 190521217 + Gm14273 antisense antisense MGP_CBAJ_T0058787.1 MGP_CBAJ_G0026554.1 mouse_genomes_project 2 181324512 181329762 - MGP_CBAJ_P0058787 Eppin protein_coding protein_coding MGP_CBAJ_T0055395.1 MGP_CBAJ_G0025671.1 mouse_genomes_project 2 92913960 92914920 - MGP_CBAJ_P0055395 Olfr1047 protein_coding protein_coding MGP_CBAJ_T0054563.1 MGP_CBAJ_G0025473.1 mouse_genomes_project 2 63987129 64086057 - MGP_CBAJ_P0054563 Ly75 protein_coding protein_coding MGP_CBAJ_T0054564.1 MGP_CBAJ_G0025473.1 mouse_genomes_project 2 63988786 64085985 - MGP_CBAJ_P0054564 Ly75 protein_coding protein_coding MGP_CBAJ_T0059221.1 MGP_CBAJ_G0026659.1 mouse_genomes_project 2 192746721 192802709 + MGP_CBAJ_P0059221 Gnas protein_coding protein_coding MGP_CBAJ_T0059222.1 MGP_CBAJ_G0026659.1 mouse_genomes_project 2 192746721 192759229 + MGP_CBAJ_P0059222 Gnas protein_coding protein_coding MGP_CBAJ_T0059223.1 MGP_CBAJ_G0026659.1 mouse_genomes_project 2 192747735 192802709 + MGP_CBAJ_P0059223 Gnas protein_coding protein_coding MGP_CBAJ_T0059224.1 MGP_CBAJ_G0026659.1 mouse_genomes_project 2 192760193 192811120 + Gnas protein_coding processed_transcript MGP_CBAJ_T0059225.1 MGP_CBAJ_G0026659.1 mouse_genomes_project 2 192760193 192811120 + MGP_CBAJ_P0059225 Gnas protein_coding protein_coding MGP_CBAJ_T0059226.1 MGP_CBAJ_G0026659.1 mouse_genomes_project 2 192760193 192811362 + MGP_CBAJ_P0059226 Gnas protein_coding protein_coding MGP_CBAJ_T0059227.1 MGP_CBAJ_G0026659.1 mouse_genomes_project 2 192760193 192811330 + MGP_CBAJ_P0059227 Gnas protein_coding protein_coding MGP_CBAJ_T0059228.1 MGP_CBAJ_G0026659.1 mouse_genomes_project 2 192760193 192764355 + MGP_CBAJ_P0059228 Gnas protein_coding protein_coding MGP_CBAJ_T0059229.1 MGP_CBAJ_G0026659.1 mouse_genomes_project 2 192792200 192809859 + Gnas protein_coding processed_transcript MGP_CBAJ_T0059230.1 MGP_CBAJ_G0026659.1 mouse_genomes_project 2 192792329 192811120 + Gnas protein_coding processed_transcript MGP_CBAJ_T0059231.1 MGP_CBAJ_G0026659.1 mouse_genomes_project 2 192792360 192793575 + Gnas protein_coding processed_transcript MGP_CBAJ_T0059232.1 MGP_CBAJ_G0026659.1 mouse_genomes_project 2 192792387 192802709 + Gnas protein_coding processed_transcript MGP_CBAJ_T0059233.1 MGP_CBAJ_G0026659.1 mouse_genomes_project 2 192792654 192809897 + Gnas protein_coding processed_transcript MGP_CBAJ_T0059234.1 MGP_CBAJ_G0026659.1 mouse_genomes_project 2 192794633 192811362 + MGP_CBAJ_P0059234 Gnas protein_coding protein_coding MGP_CBAJ_T0059235.1 MGP_CBAJ_G0026659.1 mouse_genomes_project 2 192794724 192811362 + MGP_CBAJ_P0059235 Gnas protein_coding protein_coding MGP_CBAJ_T0059236.1 MGP_CBAJ_G0026659.1 mouse_genomes_project 2 192794914 192802709 + MGP_CBAJ_P0059236 Gnas protein_coding protein_coding MGP_CBAJ_T0059237.1 MGP_CBAJ_G0026659.1 mouse_genomes_project 2 192794923 192811366 + MGP_CBAJ_P0059237 Gnas protein_coding protein_coding MGP_CBAJ_T0059239.1 MGP_CBAJ_G0026659.1 mouse_genomes_project 2 192806321 192810027 + Gnas protein_coding retained_intron MGP_CBAJ_T0059240.1 MGP_CBAJ_G0026659.1 mouse_genomes_project 2 192809267 192810346 + Gnas protein_coding retained_intron MGP_CBAJ_T0059277.1 MGP_CBAJ_G0026673.1 mouse_genomes_project 2 198222496 198708954 + MGP_CBAJ_P0059277 Cdh4 protein_coding protein_coding MGP_CBAJ_T0059278.1 MGP_CBAJ_G0026673.1 mouse_genomes_project 2 198222687 198657348 + MGP_CBAJ_P0059278 Cdh4 protein_coding protein_coding MGP_CBAJ_T0059279.1 MGP_CBAJ_G0026673.1 mouse_genomes_project 2 198224272 198581446 + Cdh4 protein_coding processed_transcript MGP_CBAJ_T0059280.1 MGP_CBAJ_G0026673.1 mouse_genomes_project 2 198578547 198598375 + Cdh4 protein_coding processed_transcript MGP_CBAJ_T0059281.1 MGP_CBAJ_G0026673.1 mouse_genomes_project 2 198703456 198705722 + Cdh4 protein_coding retained_intron MGP_CBAJ_T0059282.1 MGP_CBAJ_G0026673.1 mouse_genomes_project 2 198703481 198704266 + MGP_CBAJ_P0059282 Cdh4 protein_coding protein_coding MGP_CBAJ_T0017546.1 MGP_CBAJ_G0015183.1 mouse_genomes_project 2 96606913 96614700 - Gm13764 processed_transcript processed_transcript MGP_CBAJ_T0099114.1 MGP_CBAJ_G0037369.1 mouse_genomes_project 2 87043100 87043207 - Gm23452 snRNA snRNA MGP_CBAJ_T0054771.1 MGP_CBAJ_G0025511.1 mouse_genomes_project 2 74102703 74286725 - MGP_CBAJ_P0054771 Lrp2 protein_coding protein_coding MGP_CBAJ_T0054772.1 MGP_CBAJ_G0025511.1 mouse_genomes_project 2 74104008 74249297 - MGP_CBAJ_P0054772 Lrp2 protein_coding unknown_likely_coding MGP_CBAJ_T0054773.1 MGP_CBAJ_G0025511.1 mouse_genomes_project 2 74187625 74286689 - MGP_CBAJ_P0054773 Lrp2 protein_coding protein_coding MGP_CBAJ_T0054774.1 MGP_CBAJ_G0025511.1 mouse_genomes_project 2 74189044 74190567 - Lrp2 protein_coding processed_transcript MGP_CBAJ_T0054775.1 MGP_CBAJ_G0025511.1 mouse_genomes_project 2 74216204 74286689 - MGP_CBAJ_P0054775 Lrp2 protein_coding protein_coding MGP_CBAJ_T0052887.1 MGP_CBAJ_G0025186.1 mouse_genomes_project 2 25387665 25441685 + MGP_CBAJ_P0052887 Kcnt1 protein_coding protein_coding MGP_CBAJ_T0052888.1 MGP_CBAJ_G0025186.1 mouse_genomes_project 2 25387726 25413586 + Kcnt1 protein_coding retained_intron MGP_CBAJ_T0052889.1 MGP_CBAJ_G0025186.1 mouse_genomes_project 2 25387785 25440757 + MGP_CBAJ_P0052889 Kcnt1 protein_coding protein_coding MGP_CBAJ_T0052890.1 MGP_CBAJ_G0025186.1 mouse_genomes_project 2 25387899 25440757 + MGP_CBAJ_P0052890 Kcnt1 protein_coding protein_coding MGP_CBAJ_T0052891.1 MGP_CBAJ_G0025186.1 mouse_genomes_project 2 25402427 25442203 + MGP_CBAJ_P0052891 Kcnt1 protein_coding protein_coding MGP_CBAJ_T0052892.1 MGP_CBAJ_G0025186.1 mouse_genomes_project 2 25402501 25419819 + Kcnt1 protein_coding retained_intron MGP_CBAJ_T0052893.1 MGP_CBAJ_G0025186.1 mouse_genomes_project 2 25402507 25441251 + MGP_CBAJ_P0052893 Kcnt1 protein_coding protein_coding MGP_CBAJ_T0052894.1 MGP_CBAJ_G0025186.1 mouse_genomes_project 2 25402514 25441720 + Kcnt1 protein_coding retained_intron MGP_CBAJ_T0052895.1 MGP_CBAJ_G0025186.1 mouse_genomes_project 2 25402517 25442913 + MGP_CBAJ_P0052895 Kcnt1 protein_coding protein_coding MGP_CBAJ_T0052896.1 MGP_CBAJ_G0025186.1 mouse_genomes_project 2 25402525 25440757 + MGP_CBAJ_P0052896 Kcnt1 protein_coding protein_coding MGP_CBAJ_T0052897.1 MGP_CBAJ_G0025186.1 mouse_genomes_project 2 25418986 25441232 + Kcnt1 protein_coding retained_intron MGP_CBAJ_T0052898.1 MGP_CBAJ_G0025186.1 mouse_genomes_project 2 25425534 25428039 + MGP_CBAJ_P0052898 Kcnt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052899.1 MGP_CBAJ_G0025186.1 mouse_genomes_project 2 25428145 25434549 + MGP_CBAJ_P0052899 Kcnt1 protein_coding protein_coding MGP_CBAJ_T0052900.1 MGP_CBAJ_G0025186.1 mouse_genomes_project 2 25432696 25441563 + Kcnt1 protein_coding retained_intron MGP_CBAJ_T0052901.1 MGP_CBAJ_G0025186.1 mouse_genomes_project 2 25435533 25440880 + Kcnt1 protein_coding retained_intron MGP_CBAJ_T0054055.1 MGP_CBAJ_G0025363.1 mouse_genomes_project 2 36207720 36260596 + MGP_CBAJ_P0054055 Gsn protein_coding protein_coding MGP_CBAJ_T0054056.1 MGP_CBAJ_G0025363.1 mouse_genomes_project 2 36207724 36255957 + MGP_CBAJ_P0054056 Gsn protein_coding protein_coding MGP_CBAJ_T0054057.1 MGP_CBAJ_G0025363.1 mouse_genomes_project 2 36207736 36246275 + MGP_CBAJ_P0054057 Gsn protein_coding protein_coding MGP_CBAJ_T0054058.1 MGP_CBAJ_G0025363.1 mouse_genomes_project 2 36207749 36246273 + MGP_CBAJ_P0054058 Gsn protein_coding protein_coding MGP_CBAJ_T0054059.1 MGP_CBAJ_G0025363.1 mouse_genomes_project 2 36207789 36243153 + MGP_CBAJ_P0054059 Gsn protein_coding protein_coding MGP_CBAJ_T0054060.1 MGP_CBAJ_G0025363.1 mouse_genomes_project 2 36235085 36260598 + MGP_CBAJ_P0054060 Gsn protein_coding protein_coding MGP_CBAJ_T0054061.1 MGP_CBAJ_G0025363.1 mouse_genomes_project 2 36235218 36237731 + Gsn protein_coding retained_intron MGP_CBAJ_T0101779.1 MGP_CBAJ_G0039810.1 mouse_genomes_project 2 37383028 37383967 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0054240.1 MGP_CBAJ_G0025422.1 mouse_genomes_project 2 40316617 40365308 - MGP_CBAJ_P0054240 Golga1 protein_coding protein_coding MGP_CBAJ_T0054241.1 MGP_CBAJ_G0025422.1 mouse_genomes_project 2 40316853 40365330 - MGP_CBAJ_P0054241 Golga1 protein_coding unknown_likely_coding MGP_CBAJ_T0054242.1 MGP_CBAJ_G0025422.1 mouse_genomes_project 2 40316859 40352831 - MGP_CBAJ_P0054242 Golga1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054243.1 MGP_CBAJ_G0025422.1 mouse_genomes_project 2 40317135 40318763 - Golga1 protein_coding processed_transcript MGP_CBAJ_T0054244.1 MGP_CBAJ_G0025422.1 mouse_genomes_project 2 40318009 40318923 - Golga1 protein_coding retained_intron MGP_CBAJ_T0054245.1 MGP_CBAJ_G0025422.1 mouse_genomes_project 2 40318169 40319918 - MGP_CBAJ_P0054245 Golga1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054246.1 MGP_CBAJ_G0025422.1 mouse_genomes_project 2 40318510 40319598 - Golga1 protein_coding retained_intron MGP_CBAJ_T0054247.1 MGP_CBAJ_G0025422.1 mouse_genomes_project 2 40323068 40365308 - Golga1 protein_coding retained_intron MGP_CBAJ_T0054248.1 MGP_CBAJ_G0025422.1 mouse_genomes_project 2 40340982 40355939 - MGP_CBAJ_P0054248 Golga1 protein_coding protein_coding MGP_CBAJ_T0054249.1 MGP_CBAJ_G0025422.1 mouse_genomes_project 2 40346899 40365305 - Golga1 protein_coding retained_intron MGP_CBAJ_T0056526.1 MGP_CBAJ_G0026038.1 mouse_genomes_project 2 130550649 130553799 + MGP_CBAJ_P0056526 Chac1 protein_coding protein_coding MGP_CBAJ_T0057005.1 MGP_CBAJ_G0026131.1 mouse_genomes_project 2 137796868 137798555 + MGP_CBAJ_P0057005 Eid1 protein_coding protein_coding MGP_CBAJ_T0055379.1 MGP_CBAJ_G0025656.1 mouse_genomes_project 2 92555809 92556748 + MGP_CBAJ_P0055379 Olfr1025-ps1 protein_coding protein_coding MGP_CBAJ_T0055380.1 MGP_CBAJ_G0025656.1 mouse_genomes_project 2 92555809 92556730 + MGP_CBAJ_P0055380 Olfr1025-ps1 protein_coding protein_coding MGP_CBAJ_T0057886.1 MGP_CBAJ_G0026340.1 mouse_genomes_project 2 166631259 166636558 + MGP_CBAJ_P0057886 Tmem74b protein_coding protein_coding MGP_CBAJ_T0057887.1 MGP_CBAJ_G0026340.1 mouse_genomes_project 2 166631562 166641395 + MGP_CBAJ_P0057887 Tmem74b protein_coding protein_coding MGP_CBAJ_T0013660.1 MGP_CBAJ_G0011772.1 mouse_genomes_project 2 172627138 172627682 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007112.1 MGP_CBAJ_G0005827.1 mouse_genomes_project 2 66385998 66389711 - Gm13564 lincRNA lincRNA MGP_CBAJ_T0101785.1 MGP_CBAJ_G0039816.1 mouse_genomes_project 2 38217979 38218233 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0054708.1 MGP_CBAJ_G0025496.1 mouse_genomes_project 2 70601977 70654803 - MGP_CBAJ_P0054708 Scn1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0054709.1 MGP_CBAJ_G0025496.1 mouse_genomes_project 2 70601980 70767347 - MGP_CBAJ_P0054709 Scn1a protein_coding protein_coding MGP_CBAJ_T0054710.1 MGP_CBAJ_G0025496.1 mouse_genomes_project 2 70601981 70791681 - MGP_CBAJ_P0054710 Scn1a protein_coding protein_coding MGP_CBAJ_T0054711.1 MGP_CBAJ_G0025496.1 mouse_genomes_project 2 70601983 70695618 - MGP_CBAJ_P0054711 Scn1a protein_coding protein_coding MGP_CBAJ_T0054712.1 MGP_CBAJ_G0025496.1 mouse_genomes_project 2 70604084 70695600 - MGP_CBAJ_P0054712 Scn1a protein_coding protein_coding MGP_CBAJ_T0054713.1 MGP_CBAJ_G0025496.1 mouse_genomes_project 2 70604091 70654996 - MGP_CBAJ_P0054713 Scn1a protein_coding protein_coding MGP_CBAJ_T0054714.1 MGP_CBAJ_G0025496.1 mouse_genomes_project 2 70662857 70791684 - MGP_CBAJ_P0054714 Scn1a protein_coding protein_coding MGP_CBAJ_T0054715.1 MGP_CBAJ_G0025496.1 mouse_genomes_project 2 70692795 70791658 - Scn1a protein_coding retained_intron MGP_CBAJ_T0056847.1 MGP_CBAJ_G0026089.1 mouse_genomes_project 2 132880833 132900925 - MGP_CBAJ_P0056847 Serinc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056855.1 MGP_CBAJ_G0026089.1 mouse_genomes_project 2 132892952 132901876 - MGP_CBAJ_P0056855 Serinc4 protein_coding protein_coding MGP_CBAJ_T0056856.1 MGP_CBAJ_G0026089.1 mouse_genomes_project 2 132892952 132901788 - MGP_CBAJ_P0056856 Serinc4 protein_coding protein_coding MGP_CBAJ_T0056857.1 MGP_CBAJ_G0026089.1 mouse_genomes_project 2 132892964 132900925 - MGP_CBAJ_P0056857 Serinc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056858.1 MGP_CBAJ_G0026089.1 mouse_genomes_project 2 132893022 132900919 - MGP_CBAJ_P0056858 Serinc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056859.1 MGP_CBAJ_G0026089.1 mouse_genomes_project 2 132897217 132898817 - Serinc4 protein_coding retained_intron MGP_CBAJ_T0010313.1 MGP_CBAJ_G0008451.1 mouse_genomes_project 2 102498040 102498105 + Mir129b miRNA miRNA MGP_CBAJ_T0056213.1 MGP_CBAJ_G0025934.1 mouse_genomes_project 2 116785161 116789896 - MGP_CBAJ_P0056213 Fshb protein_coding protein_coding MGP_CBAJ_T0059457.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200340447 200380490 + MGP_CBAJ_P0059457 Rtel1 protein_coding protein_coding MGP_CBAJ_T0059458.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200340461 200371332 + Rtel1 protein_coding retained_intron MGP_CBAJ_T0059459.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200340470 200380452 + Rtel1 protein_coding retained_intron MGP_CBAJ_T0059460.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200340470 200380490 + MGP_CBAJ_P0059460 Rtel1 protein_coding protein_coding MGP_CBAJ_T0059461.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200340493 200380490 + MGP_CBAJ_P0059461 Rtel1 protein_coding protein_coding MGP_CBAJ_T0059462.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200340493 200380490 + MGP_CBAJ_P0059462 Rtel1 protein_coding protein_coding MGP_CBAJ_T0059463.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200340493 200380452 + MGP_CBAJ_P0059463 Rtel1 protein_coding protein_coding MGP_CBAJ_T0059464.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200340671 200344403 + MGP_CBAJ_P0059464 Rtel1 protein_coding protein_coding MGP_CBAJ_T0059465.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200349325 200380490 + MGP_CBAJ_P0059465 Rtel1 protein_coding protein_coding MGP_CBAJ_T0059466.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200360045 200370922 + MGP_CBAJ_P0059466 Rtel1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059467.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200363221 200370905 + Rtel1 protein_coding retained_intron MGP_CBAJ_T0059468.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200373328 200373829 + Rtel1 protein_coding retained_intron MGP_CBAJ_T0059469.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200373891 200375937 + Rtel1 protein_coding retained_intron MGP_CBAJ_T0059470.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200374001 200375029 + Rtel1 protein_coding retained_intron MGP_CBAJ_T0059471.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200375955 200379426 + Rtel1 protein_coding retained_intron MGP_CBAJ_T0059472.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200378273 200379687 + Rtel1 protein_coding processed_transcript MGP_CBAJ_T0059473.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200379076 200379891 + Rtel1 protein_coding retained_intron MGP_CBAJ_T0059474.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200379567 200380489 + Rtel1 protein_coding processed_transcript MGP_CBAJ_T0059475.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200379638 200380488 + MGP_CBAJ_P0059475 Rtel1 protein_coding protein_coding MGP_CBAJ_T0059476.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200379843 200380490 + MGP_CBAJ_P0059476 Rtel1 protein_coding protein_coding MGP_CBAJ_T0059477.1 MGP_CBAJ_G0026712.1 mouse_genomes_project 2 200379843 200380490 + MGP_CBAJ_P0059477 Rtel1 protein_coding protein_coding MGP_CBAJ_T0055304.1 MGP_CBAJ_G0025621.1 mouse_genomes_project 2 91254184 91266495 - MGP_CBAJ_P0055304 Serping1 protein_coding protein_coding MGP_CBAJ_T0055305.1 MGP_CBAJ_G0025621.1 mouse_genomes_project 2 91254303 91266535 - MGP_CBAJ_P0055305 Serping1 protein_coding protein_coding MGP_CBAJ_T0055306.1 MGP_CBAJ_G0025621.1 mouse_genomes_project 2 91261804 91263802 - Serping1 protein_coding processed_transcript MGP_CBAJ_T0055323.1 MGP_CBAJ_G0025627.1 mouse_genomes_project 2 91446481 91447701 + MGP_CBAJ_P0055323 Slc43a3 protein_coding protein_coding MGP_CBAJ_T0055324.1 MGP_CBAJ_G0025627.1 mouse_genomes_project 2 91446519 91448200 + MGP_CBAJ_P0055324 Slc43a3 protein_coding protein_coding MGP_CBAJ_T0055325.1 MGP_CBAJ_G0025627.1 mouse_genomes_project 2 91446548 91454466 + MGP_CBAJ_P0055325 Slc43a3 protein_coding protein_coding MGP_CBAJ_T0055326.1 MGP_CBAJ_G0025627.1 mouse_genomes_project 2 91446566 91468382 + MGP_CBAJ_P0055326 Slc43a3 protein_coding protein_coding MGP_CBAJ_T0055327.1 MGP_CBAJ_G0025627.1 mouse_genomes_project 2 91446591 91447548 + Slc43a3 protein_coding processed_transcript MGP_CBAJ_T0055328.1 MGP_CBAJ_G0025627.1 mouse_genomes_project 2 91446776 91458014 + Slc43a3 protein_coding retained_intron MGP_CBAJ_T0055467.1 MGP_CBAJ_G0025733.1 mouse_genomes_project 2 94873455 94874406 + MGP_CBAJ_P0055467 Olfr152 protein_coding protein_coding MGP_CBAJ_T0055468.1 MGP_CBAJ_G0025733.1 mouse_genomes_project 2 94873461 94874406 + MGP_CBAJ_P0055468 Olfr152 protein_coding protein_coding MGP_CBAJ_T0052640.1 MGP_CBAJ_G0025131.1 mouse_genomes_project 2 24499153 24500965 + Entpd8 protein_coding retained_intron MGP_CBAJ_T0052641.1 MGP_CBAJ_G0025131.1 mouse_genomes_project 2 24499171 24504566 + MGP_CBAJ_P0052641 Entpd8 protein_coding protein_coding MGP_CBAJ_T0052642.1 MGP_CBAJ_G0025131.1 mouse_genomes_project 2 24499174 24504566 + MGP_CBAJ_P0052642 Entpd8 protein_coding protein_coding MGP_CBAJ_T0052643.1 MGP_CBAJ_G0025131.1 mouse_genomes_project 2 24499358 24504565 + Entpd8 protein_coding retained_intron MGP_CBAJ_T0052644.1 MGP_CBAJ_G0025131.1 mouse_genomes_project 2 24500660 24504002 + Entpd8 protein_coding retained_intron MGP_CBAJ_T0052645.1 MGP_CBAJ_G0025131.1 mouse_genomes_project 2 24500667 24504566 + MGP_CBAJ_P0052645 Entpd8 protein_coding protein_coding MGP_CBAJ_T0052646.1 MGP_CBAJ_G0025131.1 mouse_genomes_project 2 24500882 24502584 + MGP_CBAJ_P0052646 Entpd8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052647.1 MGP_CBAJ_G0025131.1 mouse_genomes_project 2 24503526 24504424 + Entpd8 protein_coding retained_intron MGP_CBAJ_T0053250.1 MGP_CBAJ_G0025249.1 mouse_genomes_project 2 29082600 29090764 + MGP_CBAJ_P0053250 Setx protein_coding protein_coding MGP_CBAJ_T0053251.1 MGP_CBAJ_G0025249.1 mouse_genomes_project 2 29083411 29160697 + MGP_CBAJ_P0053251 Setx protein_coding protein_coding MGP_CBAJ_T0053252.1 MGP_CBAJ_G0025249.1 mouse_genomes_project 2 29084305 29090968 + Setx protein_coding retained_intron MGP_CBAJ_T0053253.1 MGP_CBAJ_G0025249.1 mouse_genomes_project 2 29122171 29127719 + Setx protein_coding processed_transcript MGP_CBAJ_T0053254.1 MGP_CBAJ_G0025249.1 mouse_genomes_project 2 29129414 29156027 + MGP_CBAJ_P0053254 Setx protein_coding protein_coding MGP_CBAJ_T0101784.1 MGP_CBAJ_G0039815.1 mouse_genomes_project 2 38115800 38116744 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0059403.1 MGP_CBAJ_G0026701.1 mouse_genomes_project 2 199974064 200003849 + MGP_CBAJ_P0059403 Col20a1 protein_coding protein_coding MGP_CBAJ_T0059404.1 MGP_CBAJ_G0026701.1 mouse_genomes_project 2 199974064 200005061 + MGP_CBAJ_P0059404 Col20a1 protein_coding protein_coding MGP_CBAJ_T0059405.1 MGP_CBAJ_G0026701.1 mouse_genomes_project 2 199976594 200008463 + MGP_CBAJ_P0059405 Col20a1 protein_coding unknown_likely_coding MGP_CBAJ_T0059406.1 MGP_CBAJ_G0026701.1 mouse_genomes_project 2 199987991 199990996 + MGP_CBAJ_P0059406 Col20a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059407.1 MGP_CBAJ_G0026701.1 mouse_genomes_project 2 200000788 200005061 + MGP_CBAJ_P0059407 Col20a1 protein_coding protein_coding MGP_CBAJ_T0013508.1 MGP_CBAJ_G0011620.1 mouse_genomes_project 2 110620116 110620327 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055672.1 MGP_CBAJ_G0025840.1 mouse_genomes_project 2 98899019 98931844 + MGP_CBAJ_P0055672 Spi1 protein_coding protein_coding MGP_CBAJ_T0055673.1 MGP_CBAJ_G0025840.1 mouse_genomes_project 2 98899037 98907295 + Spi1 protein_coding processed_transcript MGP_CBAJ_T0055674.1 MGP_CBAJ_G0025840.1 mouse_genomes_project 2 98913080 98933234 + MGP_CBAJ_P0055674 Spi1 protein_coding protein_coding MGP_CBAJ_T0055675.1 MGP_CBAJ_G0025840.1 mouse_genomes_project 2 98913764 98930793 + MGP_CBAJ_P0055675 Spi1 protein_coding protein_coding MGP_CBAJ_T0058456.1 MGP_CBAJ_G0026470.1 mouse_genomes_project 2 172896359 172939363 - MGP_CBAJ_P0058456 Samhd1 protein_coding protein_coding MGP_CBAJ_T0058457.1 MGP_CBAJ_G0026470.1 mouse_genomes_project 2 172898207 172939191 - MGP_CBAJ_P0058457 Samhd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058458.1 MGP_CBAJ_G0026470.1 mouse_genomes_project 2 172898207 172939218 - MGP_CBAJ_P0058458 Samhd1 protein_coding protein_coding MGP_CBAJ_T0058459.1 MGP_CBAJ_G0026470.1 mouse_genomes_project 2 172900166 172939320 - MGP_CBAJ_P0058459 Samhd1 protein_coding protein_coding MGP_CBAJ_T0058460.1 MGP_CBAJ_G0026470.1 mouse_genomes_project 2 172900500 172912588 - Samhd1 protein_coding retained_intron MGP_CBAJ_T0058461.1 MGP_CBAJ_G0026470.1 mouse_genomes_project 2 172905478 172939304 - MGP_CBAJ_P0058461 Samhd1 protein_coding protein_coding MGP_CBAJ_T0058462.1 MGP_CBAJ_G0026470.1 mouse_genomes_project 2 172911257 172912587 - Samhd1 protein_coding retained_intron MGP_CBAJ_T0058463.1 MGP_CBAJ_G0026470.1 mouse_genomes_project 2 172923798 172939035 - Samhd1 protein_coding retained_intron MGP_CBAJ_T0058464.1 MGP_CBAJ_G0026470.1 mouse_genomes_project 2 172926081 172934292 - Samhd1 protein_coding retained_intron MGP_CBAJ_T0007153.1 MGP_CBAJ_G0005861.1 mouse_genomes_project 2 90966856 90994930 - Gm13710 lincRNA lincRNA MGP_CBAJ_T0013284.1 MGP_CBAJ_G0011396.1 mouse_genomes_project 2 22754146 22754594 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007320.1 MGP_CBAJ_G0005996.1 mouse_genomes_project 2 188045273 188046878 - Gm17619 lincRNA lincRNA MGP_CBAJ_T0054154.1 MGP_CBAJ_G0025405.1 mouse_genomes_project 2 38486072 38550663 - MGP_CBAJ_P0054154 Rc3h2 protein_coding protein_coding MGP_CBAJ_T0054155.1 MGP_CBAJ_G0025405.1 mouse_genomes_project 2 38489458 38550751 - MGP_CBAJ_P0054155 Rc3h2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054156.1 MGP_CBAJ_G0025405.1 mouse_genomes_project 2 38493180 38493892 - Rc3h2 protein_coding retained_intron MGP_CBAJ_T0054157.1 MGP_CBAJ_G0025405.1 mouse_genomes_project 2 38498592 38502047 - Rc3h2 protein_coding retained_intron MGP_CBAJ_T0054158.1 MGP_CBAJ_G0025405.1 mouse_genomes_project 2 38512723 38514959 - Rc3h2 protein_coding retained_intron MGP_CBAJ_T0054159.1 MGP_CBAJ_G0025405.1 mouse_genomes_project 2 38521087 38525545 - Rc3h2 protein_coding retained_intron MGP_CBAJ_T0054160.1 MGP_CBAJ_G0025405.1 mouse_genomes_project 2 38537427 38542595 - Rc3h2 protein_coding processed_transcript MGP_CBAJ_T0054161.1 MGP_CBAJ_G0025405.1 mouse_genomes_project 2 38541391 38544870 - Rc3h2 protein_coding retained_intron MGP_CBAJ_T0058820.1 MGP_CBAJ_G0026569.1 mouse_genomes_project 2 181580475 181587063 - Acot8 protein_coding retained_intron MGP_CBAJ_T0058821.1 MGP_CBAJ_G0026569.1 mouse_genomes_project 2 181580475 181597940 - MGP_CBAJ_P0058821 Acot8 protein_coding protein_coding MGP_CBAJ_T0058822.1 MGP_CBAJ_G0026569.1 mouse_genomes_project 2 181580475 181597940 - MGP_CBAJ_P0058822 Acot8 protein_coding protein_coding MGP_CBAJ_T0058823.1 MGP_CBAJ_G0026569.1 mouse_genomes_project 2 181586381 181597939 - MGP_CBAJ_P0058823 Acot8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058824.1 MGP_CBAJ_G0026569.1 mouse_genomes_project 2 181592618 181597880 - Acot8 protein_coding retained_intron MGP_CBAJ_T0057169.1 MGP_CBAJ_G0026169.1 mouse_genomes_project 2 140260545 140301372 + Acoxl protein_coding processed_transcript MGP_CBAJ_T0057170.1 MGP_CBAJ_G0026169.1 mouse_genomes_project 2 140277914 140579818 + MGP_CBAJ_P0057170 Acoxl protein_coding protein_coding MGP_CBAJ_T0057171.1 MGP_CBAJ_G0026169.1 mouse_genomes_project 2 140335583 140579453 + MGP_CBAJ_P0057171 Acoxl protein_coding protein_coding MGP_CBAJ_T0056150.1 MGP_CBAJ_G0025923.1 mouse_genomes_project 2 114464598 114472245 - Eif3m protein_coding retained_intron MGP_CBAJ_T0056151.1 MGP_CBAJ_G0025923.1 mouse_genomes_project 2 114464598 114482257 - MGP_CBAJ_P0056151 Eif3m protein_coding protein_coding MGP_CBAJ_T0056152.1 MGP_CBAJ_G0025923.1 mouse_genomes_project 2 114464601 114471799 - MGP_CBAJ_P0056152 Eif3m protein_coding protein_coding MGP_CBAJ_T0056153.1 MGP_CBAJ_G0025923.1 mouse_genomes_project 2 114464631 114482220 - MGP_CBAJ_P0056153 Eif3m protein_coding protein_coding MGP_CBAJ_T0053225.1 MGP_CBAJ_G0025243.1 mouse_genomes_project 2 28600633 28737675 + MGP_CBAJ_P0053225 Ak8 protein_coding protein_coding MGP_CBAJ_T0053226.1 MGP_CBAJ_G0025243.1 mouse_genomes_project 2 28600676 28645015 + Ak8 protein_coding processed_transcript MGP_CBAJ_T0053227.1 MGP_CBAJ_G0025243.1 mouse_genomes_project 2 28652819 28670736 + Ak8 protein_coding processed_transcript MGP_CBAJ_T0055791.1 MGP_CBAJ_G0025855.1 mouse_genomes_project 2 99623314 99624789 + MGP_CBAJ_P0055791 Harbi1 protein_coding protein_coding MGP_CBAJ_T0055792.1 MGP_CBAJ_G0025855.1 mouse_genomes_project 2 99623315 99625187 + MGP_CBAJ_P0055792 Harbi1 protein_coding protein_coding MGP_CBAJ_T0055793.1 MGP_CBAJ_G0025855.1 mouse_genomes_project 2 99623379 99629317 + MGP_CBAJ_P0055793 Harbi1 protein_coding protein_coding MGP_CBAJ_T0055794.1 MGP_CBAJ_G0025855.1 mouse_genomes_project 2 99623384 99635432 + MGP_CBAJ_P0055794 Harbi1 protein_coding protein_coding MGP_CBAJ_T0055795.1 MGP_CBAJ_G0025855.1 mouse_genomes_project 2 99624656 99633174 + MGP_CBAJ_P0055795 Harbi1 protein_coding protein_coding MGP_CBAJ_T0101821.1 MGP_CBAJ_G0039852.1 mouse_genomes_project 2 98009606 98031948 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0057462.1 MGP_CBAJ_G0026237.1 mouse_genomes_project 2 144985385 145088264 - MGP_CBAJ_P0057462 Slc23a2 protein_coding protein_coding MGP_CBAJ_T0057463.1 MGP_CBAJ_G0026237.1 mouse_genomes_project 2 144988303 144989575 - Slc23a2 protein_coding processed_transcript MGP_CBAJ_T0057464.1 MGP_CBAJ_G0026237.1 mouse_genomes_project 2 144993597 144999924 - Slc23a2 protein_coding processed_transcript MGP_CBAJ_T0057465.1 MGP_CBAJ_G0026237.1 mouse_genomes_project 2 145007670 145088264 - Slc23a2 protein_coding processed_transcript MGP_CBAJ_T0057466.1 MGP_CBAJ_G0026237.1 mouse_genomes_project 2 145008442 145010560 - Slc23a2 protein_coding processed_transcript MGP_CBAJ_T0057467.1 MGP_CBAJ_G0026237.1 mouse_genomes_project 2 145021659 145030505 - Slc23a2 protein_coding processed_transcript MGP_CBAJ_T0057468.1 MGP_CBAJ_G0026237.1 mouse_genomes_project 2 145030099 145049782 - MGP_CBAJ_P0057468 Slc23a2 protein_coding protein_coding MGP_CBAJ_T0007094.1 MGP_CBAJ_G0005811.1 mouse_genomes_project 2 48687843 48715624 - Gm13470 lincRNA lincRNA MGP_CBAJ_T0056253.1 MGP_CBAJ_G0025944.1 mouse_genomes_project 2 120622508 120692897 + MGP_CBAJ_P0056253 Slc5a12 protein_coding protein_coding MGP_CBAJ_T0056254.1 MGP_CBAJ_G0025944.1 mouse_genomes_project 2 120622517 120692907 + MGP_CBAJ_P0056254 Slc5a12 protein_coding protein_coding MGP_CBAJ_T0056255.1 MGP_CBAJ_G0025944.1 mouse_genomes_project 2 120622629 120661576 + Slc5a12 protein_coding retained_intron MGP_CBAJ_T0056256.1 MGP_CBAJ_G0025944.1 mouse_genomes_project 2 120622934 120631340 + Slc5a12 protein_coding processed_transcript MGP_CBAJ_T0056257.1 MGP_CBAJ_G0025944.1 mouse_genomes_project 2 120631274 120691712 + Slc5a12 protein_coding processed_transcript MGP_CBAJ_T0055676.1 MGP_CBAJ_G0025841.1 mouse_genomes_project 2 98935462 98953835 + MGP_CBAJ_P0055676 Mybpc3 protein_coding protein_coding MGP_CBAJ_T0055677.1 MGP_CBAJ_G0025841.1 mouse_genomes_project 2 98935462 98953829 + MGP_CBAJ_P0055677 Mybpc3 protein_coding protein_coding MGP_CBAJ_T0055678.1 MGP_CBAJ_G0025841.1 mouse_genomes_project 2 98935462 98953829 + MGP_CBAJ_P0055678 Mybpc3 protein_coding protein_coding MGP_CBAJ_T0055679.1 MGP_CBAJ_G0025841.1 mouse_genomes_project 2 98935487 98953836 + MGP_CBAJ_P0055679 Mybpc3 protein_coding unknown_likely_coding MGP_CBAJ_T0004052.1 MGP_CBAJ_G0003581.1 mouse_genomes_project 2 167060913 167062867 - AA387200 antisense antisense MGP_CBAJ_T0059195.1 MGP_CBAJ_G0026650.1 mouse_genomes_project 2 191535386 191547803 - MGP_CBAJ_P0059195 Zbp1 protein_coding protein_coding MGP_CBAJ_T0059196.1 MGP_CBAJ_G0026650.1 mouse_genomes_project 2 191535389 191547777 - Zbp1 protein_coding retained_intron MGP_CBAJ_T0059197.1 MGP_CBAJ_G0026650.1 mouse_genomes_project 2 191542622 191547790 - MGP_CBAJ_P0059197 Zbp1 protein_coding protein_coding MGP_CBAJ_T0013245.1 MGP_CBAJ_G0011357.1 mouse_genomes_project 2 9047483 9048417 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013582.1 MGP_CBAJ_G0011694.1 mouse_genomes_project 2 144312534 144313051 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004082.1 MGP_CBAJ_G0003606.1 mouse_genomes_project 2 180747735 180752539 + Gm11455 antisense antisense MGP_CBAJ_T0055582.1 MGP_CBAJ_G0025825.1 mouse_genomes_project 2 97920400 97952274 - MGP_CBAJ_P0055582 Olfr1272 protein_coding protein_coding MGP_CBAJ_T0003912.1 MGP_CBAJ_G0003486.1 mouse_genomes_project 2 70130438 70138660 - Gm13619 antisense antisense MGP_CBAJ_T0057489.1 MGP_CBAJ_G0026242.1 mouse_genomes_project 2 145531365 145544317 - Gpcpd1 protein_coding retained_intron MGP_CBAJ_T0057490.1 MGP_CBAJ_G0026242.1 mouse_genomes_project 2 145531365 145590379 - MGP_CBAJ_P0057490 Gpcpd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057491.1 MGP_CBAJ_G0026242.1 mouse_genomes_project 2 145531365 145590388 - MGP_CBAJ_P0057491 Gpcpd1 protein_coding protein_coding MGP_CBAJ_T0057492.1 MGP_CBAJ_G0026242.1 mouse_genomes_project 2 145531365 145590436 - MGP_CBAJ_P0057492 Gpcpd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057493.1 MGP_CBAJ_G0026242.1 mouse_genomes_project 2 145531365 145590434 - MGP_CBAJ_P0057493 Gpcpd1 protein_coding protein_coding MGP_CBAJ_T0057494.1 MGP_CBAJ_G0026242.1 mouse_genomes_project 2 145531365 145590449 - MGP_CBAJ_P0057494 Gpcpd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057495.1 MGP_CBAJ_G0026242.1 mouse_genomes_project 2 145531366 145590449 - MGP_CBAJ_P0057495 Gpcpd1 protein_coding protein_coding MGP_CBAJ_T0057496.1 MGP_CBAJ_G0026242.1 mouse_genomes_project 2 145535008 145590334 - MGP_CBAJ_P0057496 Gpcpd1 protein_coding protein_coding MGP_CBAJ_T0057497.1 MGP_CBAJ_G0026242.1 mouse_genomes_project 2 145536434 145540415 - MGP_CBAJ_P0057497 Gpcpd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057498.1 MGP_CBAJ_G0026242.1 mouse_genomes_project 2 145557780 145590388 - MGP_CBAJ_P0057498 Gpcpd1 protein_coding protein_coding MGP_CBAJ_T0057499.1 MGP_CBAJ_G0026242.1 mouse_genomes_project 2 145563964 145599898 - MGP_CBAJ_P0057499 Gpcpd1 protein_coding protein_coding MGP_CBAJ_T0057500.1 MGP_CBAJ_G0026242.1 mouse_genomes_project 2 145564076 145590418 - Gpcpd1 protein_coding processed_transcript MGP_CBAJ_T0057501.1 MGP_CBAJ_G0026242.1 mouse_genomes_project 2 145576915 145590447 - Gpcpd1 protein_coding processed_transcript MGP_CBAJ_T0013675.1 MGP_CBAJ_G0011787.1 mouse_genomes_project 2 181218790 181219515 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100385.1 MGP_CBAJ_G0038640.1 mouse_genomes_project 2 117707250 117707382 - Gm23439 snoRNA snoRNA MGP_CBAJ_T0013535.1 MGP_CBAJ_G0011647.1 mouse_genomes_project 2 118609047 118610038 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0003815.1 MGP_CBAJ_G0003411.1 mouse_genomes_project 2 2248650 2252568 + 4930551O13Rik antisense antisense MGP_CBAJ_T0053933.1 MGP_CBAJ_G0025347.1 mouse_genomes_project 2 34321992 34415485 - MGP_CBAJ_P0053933 Lmx1b protein_coding protein_coding MGP_CBAJ_T0053934.1 MGP_CBAJ_G0025347.1 mouse_genomes_project 2 34325358 34415472 - MGP_CBAJ_P0053934 Lmx1b protein_coding protein_coding MGP_CBAJ_T0053935.1 MGP_CBAJ_G0025347.1 mouse_genomes_project 2 34328187 34407276 - Lmx1b protein_coding processed_transcript MGP_CBAJ_T0059169.1 MGP_CBAJ_G0026642.1 mouse_genomes_project 2 190671029 190672841 + MGP_CBAJ_P0059169 Fam209 protein_coding protein_coding MGP_CBAJ_T0098019.1 MGP_CBAJ_G0036292.1 mouse_genomes_project 2 115585546 115585662 + n-R5s201 rRNA rRNA MGP_CBAJ_T0007104.1 MGP_CBAJ_G0005820.1 mouse_genomes_project 2 55803344 55809415 - Gm26603 lincRNA lincRNA MGP_CBAJ_T0004064.1 MGP_CBAJ_G0003592.1 mouse_genomes_project 2 171975426 171982449 - Gm14252 antisense antisense MGP_CBAJ_T0054705.1 MGP_CBAJ_G0025495.1 mouse_genomes_project 2 70500985 70586766 - MGP_CBAJ_P0054705 Ttc21b protein_coding protein_coding MGP_CBAJ_T0054706.1 MGP_CBAJ_G0025495.1 mouse_genomes_project 2 70540766 70563250 - Ttc21b protein_coding retained_intron MGP_CBAJ_T0054707.1 MGP_CBAJ_G0025495.1 mouse_genomes_project 2 70553845 70579627 - Ttc21b protein_coding retained_intron MGP_CBAJ_T0055566.1 MGP_CBAJ_G0025814.1 mouse_genomes_project 2 97564067 97565184 - MGP_CBAJ_P0055566 Olfr1259 protein_coding protein_coding MGP_CBAJ_T0057916.1 MGP_CBAJ_G0026351.1 mouse_genomes_project 2 167339200 167345864 - Rbck1 protein_coding retained_intron MGP_CBAJ_T0057917.1 MGP_CBAJ_G0026351.1 mouse_genomes_project 2 167339200 167355279 - MGP_CBAJ_P0057917 Rbck1 protein_coding protein_coding MGP_CBAJ_T0057918.1 MGP_CBAJ_G0026351.1 mouse_genomes_project 2 167339200 167355520 - MGP_CBAJ_P0057918 Rbck1 protein_coding protein_coding MGP_CBAJ_T0057919.1 MGP_CBAJ_G0026351.1 mouse_genomes_project 2 167341178 167346365 - Rbck1 protein_coding retained_intron MGP_CBAJ_T0057920.1 MGP_CBAJ_G0026351.1 mouse_genomes_project 2 167341646 167347231 - MGP_CBAJ_P0057920 Rbck1 protein_coding protein_coding MGP_CBAJ_T0057921.1 MGP_CBAJ_G0026351.1 mouse_genomes_project 2 167345804 167347483 - Rbck1 protein_coding retained_intron MGP_CBAJ_T0057922.1 MGP_CBAJ_G0026351.1 mouse_genomes_project 2 167347406 167350624 - Rbck1 protein_coding processed_transcript MGP_CBAJ_T0057923.1 MGP_CBAJ_G0026351.1 mouse_genomes_project 2 167349270 167355251 - Rbck1 protein_coding processed_transcript MGP_CBAJ_T0007093.1 MGP_CBAJ_G0005810.1 mouse_genomes_project 2 47941966 47945751 - Gm13467 lincRNA lincRNA MGP_CBAJ_T0056872.1 MGP_CBAJ_G0026096.1 mouse_genomes_project 2 133038146 133348154 - MGP_CBAJ_P0056872 Frmd5 protein_coding protein_coding MGP_CBAJ_T0056873.1 MGP_CBAJ_G0026096.1 mouse_genomes_project 2 133038146 133293285 - MGP_CBAJ_P0056873 Frmd5 protein_coding protein_coding MGP_CBAJ_T0056874.1 MGP_CBAJ_G0026096.1 mouse_genomes_project 2 133038146 133083585 - MGP_CBAJ_P0056874 Frmd5 protein_coding protein_coding MGP_CBAJ_T0056875.1 MGP_CBAJ_G0026096.1 mouse_genomes_project 2 133040355 133052946 - MGP_CBAJ_P0056875 Frmd5 protein_coding protein_coding MGP_CBAJ_T0056876.1 MGP_CBAJ_G0026096.1 mouse_genomes_project 2 133040913 133293285 - MGP_CBAJ_P0056876 Frmd5 protein_coding protein_coding MGP_CBAJ_T0056877.1 MGP_CBAJ_G0026096.1 mouse_genomes_project 2 133040915 133348090 - MGP_CBAJ_P0056877 Frmd5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056878.1 MGP_CBAJ_G0026096.1 mouse_genomes_project 2 133040916 133348059 - MGP_CBAJ_P0056878 Frmd5 protein_coding protein_coding MGP_CBAJ_T0056879.1 MGP_CBAJ_G0026096.1 mouse_genomes_project 2 133041264 133347898 - MGP_CBAJ_P0056879 Frmd5 protein_coding protein_coding MGP_CBAJ_T0056880.1 MGP_CBAJ_G0026096.1 mouse_genomes_project 2 133041657 133055912 - Frmd5 protein_coding processed_transcript MGP_CBAJ_T0056881.1 MGP_CBAJ_G0026096.1 mouse_genomes_project 2 133058536 133348124 - Frmd5 protein_coding retained_intron MGP_CBAJ_T0056882.1 MGP_CBAJ_G0026096.1 mouse_genomes_project 2 133066070 133347939 - MGP_CBAJ_P0056882 Frmd5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056883.1 MGP_CBAJ_G0026096.1 mouse_genomes_project 2 133066122 133081157 - Frmd5 protein_coding processed_transcript MGP_CBAJ_T0013468.1 MGP_CBAJ_G0011580.1 mouse_genomes_project 2 94235438 94235973 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0057208.1 MGP_CBAJ_G0026179.1 mouse_genomes_project 2 141517734 141579957 + MGP_CBAJ_P0057208 Zc3h6 protein_coding protein_coding MGP_CBAJ_T0057209.1 MGP_CBAJ_G0026179.1 mouse_genomes_project 2 141517741 141553081 + MGP_CBAJ_P0057209 Zc3h6 protein_coding protein_coding MGP_CBAJ_T0054115.1 MGP_CBAJ_G0025375.1 mouse_genomes_project 2 37294546 37316397 + MGP_CBAJ_P0054115 Ptgs1 protein_coding protein_coding MGP_CBAJ_T0054116.1 MGP_CBAJ_G0025375.1 mouse_genomes_project 2 37294676 37302182 + Ptgs1 protein_coding processed_transcript MGP_CBAJ_T0054117.1 MGP_CBAJ_G0025375.1 mouse_genomes_project 2 37300367 37316394 + Ptgs1 protein_coding processed_transcript MGP_CBAJ_T0054118.1 MGP_CBAJ_G0025375.1 mouse_genomes_project 2 37304831 37305587 + Ptgs1 protein_coding retained_intron MGP_CBAJ_T0054119.1 MGP_CBAJ_G0025375.1 mouse_genomes_project 2 37306593 37309324 + Ptgs1 protein_coding retained_intron MGP_CBAJ_T0101298.1 MGP_CBAJ_G0039412.1 mouse_genomes_project 2 95977874 95978791 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0007245.1 MGP_CBAJ_G0005935.1 mouse_genomes_project 2 161167176 161178608 - Gm14114 lincRNA lincRNA MGP_CBAJ_T0052529.1 MGP_CBAJ_G0025114.1 mouse_genomes_project 2 23361922 23391853 - MGP_CBAJ_P0052529 Tbpl2 protein_coding protein_coding MGP_CBAJ_T0052530.1 MGP_CBAJ_G0025114.1 mouse_genomes_project 2 23362116 23391790 - MGP_CBAJ_P0052530 Tbpl2 protein_coding protein_coding MGP_CBAJ_T0003908.1 MGP_CBAJ_G0003482.1 mouse_genomes_project 2 66282695 66403829 + Gm13561 antisense antisense MGP_CBAJ_T0058446.1 MGP_CBAJ_G0026467.1 mouse_genomes_project 2 172784818 172795522 - MGP_CBAJ_P0058446 Dsn1 protein_coding unknown_likely_coding MGP_CBAJ_T0058447.1 MGP_CBAJ_G0026467.1 mouse_genomes_project 2 172786346 172795649 - MGP_CBAJ_P0058447 Dsn1 protein_coding protein_coding MGP_CBAJ_T0058448.1 MGP_CBAJ_G0026467.1 mouse_genomes_project 2 172790307 172791875 - Dsn1 protein_coding retained_intron MGP_CBAJ_T0058449.1 MGP_CBAJ_G0026467.1 mouse_genomes_project 2 172791358 172794920 - MGP_CBAJ_P0058449 Dsn1 protein_coding protein_coding MGP_CBAJ_T0058450.1 MGP_CBAJ_G0026467.1 mouse_genomes_project 2 172793938 172795193 - MGP_CBAJ_P0058450 Dsn1 protein_coding protein_coding MGP_CBAJ_T0010286.1 MGP_CBAJ_G0008424.1 mouse_genomes_project 2 40120053 40120142 + Mir181b-2 miRNA miRNA MGP_CBAJ_T0017526.1 MGP_CBAJ_G0015165.1 mouse_genomes_project 2 70766821 70778785 + Gm13630 processed_transcript processed_transcript MGP_CBAJ_T0055412.1 MGP_CBAJ_G0025687.1 mouse_genomes_project 2 93563934 93564870 - MGP_CBAJ_P0055412 Olfr1089 protein_coding protein_coding MGP_CBAJ_T0054625.1 MGP_CBAJ_G0025482.1 mouse_genomes_project 2 66407177 66416296 - MGP_CBAJ_P0054625 Gcg protein_coding protein_coding MGP_CBAJ_T0054626.1 MGP_CBAJ_G0025482.1 mouse_genomes_project 2 66408378 66416291 - MGP_CBAJ_P0054626 Gcg protein_coding protein_coding MGP_CBAJ_T0054627.1 MGP_CBAJ_G0025482.1 mouse_genomes_project 2 66409216 66413324 - Gcg protein_coding processed_transcript MGP_CBAJ_T0007229.1 MGP_CBAJ_G0005921.1 mouse_genomes_project 2 145614336 145675173 + AU019990 lincRNA lincRNA MGP_CBAJ_T0007230.1 MGP_CBAJ_G0005921.1 mouse_genomes_project 2 145614336 145681103 + AU019990 lincRNA lincRNA MGP_CBAJ_T0010301.1 MGP_CBAJ_G0008439.1 mouse_genomes_project 2 82725154 82725236 - Gm44360 miRNA miRNA MGP_CBAJ_T0056360.1 MGP_CBAJ_G0026000.1 mouse_genomes_project 2 125108835 125263752 - MGP_CBAJ_P0056360 Dph6 protein_coding protein_coding MGP_CBAJ_T0056361.1 MGP_CBAJ_G0026000.1 mouse_genomes_project 2 125110398 125147578 - Dph6 protein_coding processed_transcript MGP_CBAJ_T0056362.1 MGP_CBAJ_G0026000.1 mouse_genomes_project 2 125110492 125263770 - MGP_CBAJ_P0056362 Dph6 protein_coding protein_coding MGP_CBAJ_T0056363.1 MGP_CBAJ_G0026000.1 mouse_genomes_project 2 125115468 125263827 - Dph6 protein_coding retained_intron MGP_CBAJ_T0056364.1 MGP_CBAJ_G0026000.1 mouse_genomes_project 2 125250401 125263770 - Dph6 protein_coding retained_intron MGP_CBAJ_T0003808.1 MGP_CBAJ_G0003407.1 mouse_genomes_project 2 801498 803690 - Gm13185 antisense antisense MGP_CBAJ_T0058061.1 MGP_CBAJ_G0026397.1 mouse_genomes_project 2 169207678 169227937 + MGP_CBAJ_P0058061 Bpifb2 protein_coding protein_coding MGP_CBAJ_T0058062.1 MGP_CBAJ_G0026397.1 mouse_genomes_project 2 169207708 169209019 + Bpifb2 protein_coding retained_intron MGP_CBAJ_T0007295.1 MGP_CBAJ_G0005976.1 mouse_genomes_project 2 183642457 183645939 - Gm14267 lincRNA lincRNA MGP_CBAJ_T0010243.1 MGP_CBAJ_G0008381.1 mouse_genomes_project 2 8397369 8397490 + Mir466l miRNA miRNA MGP_CBAJ_T0013603.1 MGP_CBAJ_G0011715.1 mouse_genomes_project 2 155710722 155714228 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013474.1 MGP_CBAJ_G0011586.1 mouse_genomes_project 2 94627245 94628095 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010312.1 MGP_CBAJ_G0008450.1 mouse_genomes_project 2 102498026 102498116 - Mir129-2 miRNA miRNA MGP_CBAJ_T0055433.1 MGP_CBAJ_G0025708.1 mouse_genomes_project 2 94212364 94214386 + MGP_CBAJ_P0055433 protein_coding protein_coding MGP_CBAJ_T0010214.1 MGP_CBAJ_G0008352.1 mouse_genomes_project 2 8370595 8370716 + Mir669f miRNA miRNA MGP_CBAJ_T0099131.1 MGP_CBAJ_G0037386.1 mouse_genomes_project 2 146066398 146066566 + Gm25704 snRNA snRNA MGP_CBAJ_T0053186.1 MGP_CBAJ_G0025236.1 mouse_genomes_project 2 28390992 28391382 + MGP_CBAJ_P0053186 protein_coding protein_coding MGP_CBAJ_T0100358.1 MGP_CBAJ_G0038613.1 mouse_genomes_project 2 41752853 41752979 + Gm24467 snoRNA snoRNA MGP_CBAJ_T0055881.1 MGP_CBAJ_G0025869.1 mouse_genomes_project 2 100648142 100663537 + MGP_CBAJ_P0055881 Chst1 protein_coding protein_coding MGP_CBAJ_T0055528.1 MGP_CBAJ_G0025788.1 mouse_genomes_project 2 96757086 96758058 - MGP_CBAJ_P0055528 Olfr1228 protein_coding protein_coding MGP_CBAJ_T0010324.1 MGP_CBAJ_G0008462.1 mouse_genomes_project 2 129337635 129337724 - Gm22800 miRNA miRNA MGP_CBAJ_T0013247.1 MGP_CBAJ_G0011359.1 mouse_genomes_project 2 9644544 9645808 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0054494.1 MGP_CBAJ_G0025465.1 mouse_genomes_project 2 62419549 62473912 + MGP_CBAJ_P0054494 Gm11099 protein_coding protein_coding MGP_CBAJ_T0101826.1 MGP_CBAJ_G0039857.1 mouse_genomes_project 2 133645110 133647464 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0056831.1 MGP_CBAJ_G0026085.1 mouse_genomes_project 2 132791990 132809200 - MGP_CBAJ_P0056831 Strc protein_coding protein_coding MGP_CBAJ_T0056832.1 MGP_CBAJ_G0026085.1 mouse_genomes_project 2 132796690 132803308 - MGP_CBAJ_P0056832 Strc protein_coding nonsense_mediated_decay MGP_CBAJ_T0056833.1 MGP_CBAJ_G0026085.1 mouse_genomes_project 2 132801167 132803292 - Strc protein_coding processed_transcript MGP_CBAJ_T0056834.1 MGP_CBAJ_G0026085.1 mouse_genomes_project 2 132801246 132803071 - Strc protein_coding retained_intron MGP_CBAJ_T0056835.1 MGP_CBAJ_G0026085.1 mouse_genomes_project 2 132804624 132815180 - Strc protein_coding retained_intron MGP_CBAJ_T0013591.1 MGP_CBAJ_G0011703.1 mouse_genomes_project 2 146271953 146272563 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0053382.1 MGP_CBAJ_G0025266.1 mouse_genomes_project 2 30227657 30258290 - MGP_CBAJ_P0053382 Zer1 protein_coding protein_coding MGP_CBAJ_T0053383.1 MGP_CBAJ_G0025266.1 mouse_genomes_project 2 30227657 30258162 - MGP_CBAJ_P0053383 Zer1 protein_coding protein_coding MGP_CBAJ_T0053384.1 MGP_CBAJ_G0025266.1 mouse_genomes_project 2 30230153 30232124 - Zer1 protein_coding retained_intron MGP_CBAJ_T0053385.1 MGP_CBAJ_G0025266.1 mouse_genomes_project 2 30230809 30233093 - Zer1 protein_coding retained_intron MGP_CBAJ_T0053386.1 MGP_CBAJ_G0025266.1 mouse_genomes_project 2 30235659 30258293 - Zer1 protein_coding retained_intron MGP_CBAJ_T0053387.1 MGP_CBAJ_G0025266.1 mouse_genomes_project 2 30235920 30258287 - Zer1 protein_coding retained_intron MGP_CBAJ_T0053388.1 MGP_CBAJ_G0025266.1 mouse_genomes_project 2 30237151 30241125 - Zer1 protein_coding retained_intron MGP_CBAJ_T0053389.1 MGP_CBAJ_G0025266.1 mouse_genomes_project 2 30237528 30237994 - Zer1 protein_coding processed_transcript MGP_CBAJ_T0053390.1 MGP_CBAJ_G0025266.1 mouse_genomes_project 2 30237866 30238894 - Zer1 protein_coding retained_intron MGP_CBAJ_T0052955.1 MGP_CBAJ_G0025196.1 mouse_genomes_project 2 25930173 25934169 - Card9 protein_coding processed_transcript MGP_CBAJ_T0052956.1 MGP_CBAJ_G0025196.1 mouse_genomes_project 2 25933630 25941141 - MGP_CBAJ_P0052956 Card9 protein_coding protein_coding MGP_CBAJ_T0052957.1 MGP_CBAJ_G0025196.1 mouse_genomes_project 2 25933631 25942312 - MGP_CBAJ_P0052957 Card9 protein_coding protein_coding MGP_CBAJ_T0007048.1 MGP_CBAJ_G0005777.1 mouse_genomes_project 2 18661644 18673585 - Gm13346 lincRNA lincRNA MGP_CBAJ_T0055406.1 MGP_CBAJ_G0025682.1 mouse_genomes_project 2 93262845 93263814 - MGP_CBAJ_P0055406 Olfr228 protein_coding protein_coding MGP_CBAJ_T0057970.1 MGP_CBAJ_G0026375.1 mouse_genomes_project 2 167962510 168024156 + MGP_CBAJ_P0057970 Tpx2 protein_coding unknown_likely_coding MGP_CBAJ_T0057971.1 MGP_CBAJ_G0026375.1 mouse_genomes_project 2 167962526 167969361 + Tpx2 protein_coding processed_transcript MGP_CBAJ_T0057972.1 MGP_CBAJ_G0026375.1 mouse_genomes_project 2 167992077 168003965 + Tpx2 protein_coding retained_intron MGP_CBAJ_T0057973.1 MGP_CBAJ_G0026375.1 mouse_genomes_project 2 168005167 168010084 + Tpx2 protein_coding retained_intron MGP_CBAJ_T0007088.1 MGP_CBAJ_G0005806.1 mouse_genomes_project 2 47278249 47291962 + Gm28643 lincRNA lincRNA MGP_CBAJ_T0007129.1 MGP_CBAJ_G0005841.1 mouse_genomes_project 2 79442317 79443393 - A630050E04Rik lincRNA lincRNA MGP_CBAJ_T0098195.1 MGP_CBAJ_G0036468.1 mouse_genomes_project 2 113315230 113315369 + Gm24644 scaRNA scaRNA MGP_CBAJ_T0055432.1 MGP_CBAJ_G0025707.1 mouse_genomes_project 2 94140315 94141272 + MGP_CBAJ_P0055432 Olfr1112 protein_coding protein_coding MGP_CBAJ_T0013230.1 MGP_CBAJ_G0011342.1 mouse_genomes_project 2 1852631 1853065 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055427.1 MGP_CBAJ_G0025702.1 mouse_genomes_project 2 94010117 94011056 - MGP_CBAJ_P0055427 Olfr1107 protein_coding protein_coding MGP_CBAJ_T0013277.1 MGP_CBAJ_G0011389.1 mouse_genomes_project 2 20599210 20599831 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0052699.1 MGP_CBAJ_G0025145.1 mouse_genomes_project 2 24698606 24706001 + MGP_CBAJ_P0052699 Tprn protein_coding protein_coding MGP_CBAJ_T0052700.1 MGP_CBAJ_G0025145.1 mouse_genomes_project 2 24700229 24705672 + Tprn protein_coding processed_transcript MGP_CBAJ_T0052701.1 MGP_CBAJ_G0025145.1 mouse_genomes_project 2 24703679 24705287 + Tprn protein_coding processed_transcript MGP_CBAJ_T0052702.1 MGP_CBAJ_G0025145.1 mouse_genomes_project 2 24705051 24705631 + Tprn protein_coding processed_transcript MGP_CBAJ_T0013464.1 MGP_CBAJ_G0011576.1 mouse_genomes_project 2 94064888 94065423 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055960.1 MGP_CBAJ_G0025883.1 mouse_genomes_project 2 102261583 102297419 - Hsd17b12 protein_coding processed_transcript MGP_CBAJ_T0055961.1 MGP_CBAJ_G0025883.1 mouse_genomes_project 2 102261583 102394522 - MGP_CBAJ_P0055961 Hsd17b12 protein_coding protein_coding MGP_CBAJ_T0055962.1 MGP_CBAJ_G0025883.1 mouse_genomes_project 2 102261596 102394466 - Hsd17b12 protein_coding processed_transcript MGP_CBAJ_T0055963.1 MGP_CBAJ_G0025883.1 mouse_genomes_project 2 102262416 102297714 - Hsd17b12 protein_coding processed_transcript MGP_CBAJ_T0055964.1 MGP_CBAJ_G0025883.1 mouse_genomes_project 2 102347777 102394450 - Hsd17b12 protein_coding processed_transcript MGP_CBAJ_T0056670.1 MGP_CBAJ_G0026064.1 mouse_genomes_project 2 131860207 131890057 - MGP_CBAJ_P0056670 Zfp106 protein_coding protein_coding MGP_CBAJ_T0056671.1 MGP_CBAJ_G0026064.1 mouse_genomes_project 2 131860681 131918879 - MGP_CBAJ_P0056671 Zfp106 protein_coding unknown_likely_coding MGP_CBAJ_T0056672.1 MGP_CBAJ_G0026064.1 mouse_genomes_project 2 131860924 131863455 - Zfp106 protein_coding retained_intron MGP_CBAJ_T0056673.1 MGP_CBAJ_G0026064.1 mouse_genomes_project 2 131869474 131871233 - Zfp106 protein_coding retained_intron MGP_CBAJ_T0056674.1 MGP_CBAJ_G0026064.1 mouse_genomes_project 2 131873397 131875324 - MGP_CBAJ_P0056674 Zfp106 protein_coding protein_coding MGP_CBAJ_T0056675.1 MGP_CBAJ_G0026064.1 mouse_genomes_project 2 131876974 131918927 - Zfp106 protein_coding retained_intron MGP_CBAJ_T0056676.1 MGP_CBAJ_G0026064.1 mouse_genomes_project 2 131877437 131879237 - Zfp106 protein_coding retained_intron MGP_CBAJ_T0056677.1 MGP_CBAJ_G0026064.1 mouse_genomes_project 2 131879061 131882777 - MGP_CBAJ_P0056677 Zfp106 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056678.1 MGP_CBAJ_G0026064.1 mouse_genomes_project 2 131882604 131918956 - MGP_CBAJ_P0056678 Zfp106 protein_coding protein_coding MGP_CBAJ_T0056679.1 MGP_CBAJ_G0026064.1 mouse_genomes_project 2 131885833 131909888 - MGP_CBAJ_P0056679 Zfp106 protein_coding protein_coding MGP_CBAJ_T0056680.1 MGP_CBAJ_G0026064.1 mouse_genomes_project 2 131885966 131918947 - Zfp106 protein_coding processed_transcript MGP_CBAJ_T0057774.1 MGP_CBAJ_G0026309.1 mouse_genomes_project 2 163267302 163282231 + MGP_CBAJ_P0057774 Gzf1 protein_coding protein_coding MGP_CBAJ_T0057775.1 MGP_CBAJ_G0026309.1 mouse_genomes_project 2 163267490 163270329 + MGP_CBAJ_P0057775 Gzf1 protein_coding protein_coding MGP_CBAJ_T0057776.1 MGP_CBAJ_G0026309.1 mouse_genomes_project 2 163270891 163279497 + Gzf1 protein_coding processed_transcript MGP_CBAJ_T0057292.1 MGP_CBAJ_G0026200.1 mouse_genomes_project 2 143105798 143108821 + MGP_CBAJ_P0057292 Gm28372 protein_coding protein_coding MGP_CBAJ_T0100415.1 MGP_CBAJ_G0038670.1 mouse_genomes_project 2 174333052 174333184 - Gm23925 snoRNA snoRNA MGP_CBAJ_T0057593.1 MGP_CBAJ_G0026265.1 mouse_genomes_project 2 153477425 153745511 - MGP_CBAJ_P0057593 Tasp1 protein_coding protein_coding MGP_CBAJ_T0057594.1 MGP_CBAJ_G0026265.1 mouse_genomes_project 2 153477425 153745486 - MGP_CBAJ_P0057594 Tasp1 protein_coding protein_coding MGP_CBAJ_T0057595.1 MGP_CBAJ_G0026265.1 mouse_genomes_project 2 153477425 153745531 - MGP_CBAJ_P0057595 Tasp1 protein_coding protein_coding MGP_CBAJ_T0057596.1 MGP_CBAJ_G0026265.1 mouse_genomes_project 2 153635423 153716916 - Tasp1 protein_coding retained_intron MGP_CBAJ_T0053156.1 MGP_CBAJ_G0025228.1 mouse_genomes_project 2 27477035 27546985 + MGP_CBAJ_P0053156 Rxra protein_coding protein_coding MGP_CBAJ_T0053157.1 MGP_CBAJ_G0025228.1 mouse_genomes_project 2 27514403 27565300 + MGP_CBAJ_P0053157 Rxra protein_coding protein_coding MGP_CBAJ_T0053158.1 MGP_CBAJ_G0025228.1 mouse_genomes_project 2 27515694 27565300 + MGP_CBAJ_P0053158 Rxra protein_coding protein_coding MGP_CBAJ_T0053159.1 MGP_CBAJ_G0025228.1 mouse_genomes_project 2 27542385 27568074 + MGP_CBAJ_P0053159 Rxra protein_coding protein_coding MGP_CBAJ_T0053160.1 MGP_CBAJ_G0025228.1 mouse_genomes_project 2 27542385 27566534 + MGP_CBAJ_P0053160 Rxra protein_coding protein_coding MGP_CBAJ_T0053161.1 MGP_CBAJ_G0025228.1 mouse_genomes_project 2 27545287 27553788 + Rxra protein_coding processed_transcript MGP_CBAJ_T0098015.1 MGP_CBAJ_G0036288.1 mouse_genomes_project 2 87668218 87668326 - Gm23900 rRNA rRNA MGP_CBAJ_T0007231.1 MGP_CBAJ_G0005922.1 mouse_genomes_project 2 146013575 146014939 + Gm14102 lincRNA lincRNA MGP_CBAJ_T0057724.1 MGP_CBAJ_G0026296.1 mouse_genomes_project 2 160148139 160179104 + MGP_CBAJ_P0057724 protein_coding protein_coding MGP_CBAJ_T0057725.1 MGP_CBAJ_G0026296.1 mouse_genomes_project 2 160148139 160251185 + MGP_CBAJ_P0057725 protein_coding protein_coding MGP_CBAJ_T0057726.1 MGP_CBAJ_G0026296.1 mouse_genomes_project 2 160148160 160178332 + MGP_CBAJ_P0057726 protein_coding protein_coding MGP_CBAJ_T0057727.1 MGP_CBAJ_G0026296.1 mouse_genomes_project 2 160148160 160181100 + MGP_CBAJ_P0057727 protein_coding protein_coding MGP_CBAJ_T0057728.1 MGP_CBAJ_G0026296.1 mouse_genomes_project 2 160148163 160178187 + MGP_CBAJ_P0057728 protein_coding protein_coding MGP_CBAJ_T0057729.1 MGP_CBAJ_G0026296.1 mouse_genomes_project 2 160148169 160438769 + MGP_CBAJ_P0057729 protein_coding protein_coding MGP_CBAJ_T0057730.1 MGP_CBAJ_G0026296.1 mouse_genomes_project 2 160148171 160168481 + MGP_CBAJ_P0057730 protein_coding protein_coding MGP_CBAJ_T0057731.1 MGP_CBAJ_G0026296.1 mouse_genomes_project 2 160249610 160314213 + protein_coding processed_transcript MGP_CBAJ_T0057732.1 MGP_CBAJ_G0026296.1 mouse_genomes_project 2 160253428 160349486 + protein_coding retained_intron MGP_CBAJ_T0057733.1 MGP_CBAJ_G0026296.1 mouse_genomes_project 2 160253560 160349617 + MGP_CBAJ_P0057733 protein_coding protein_coding MGP_CBAJ_T0057734.1 MGP_CBAJ_G0026296.1 mouse_genomes_project 2 160257677 160438765 + protein_coding processed_transcript MGP_CBAJ_T0057735.1 MGP_CBAJ_G0026296.1 mouse_genomes_project 2 160370953 160438688 + protein_coding processed_transcript MGP_CBAJ_T0057736.1 MGP_CBAJ_G0026296.1 mouse_genomes_project 2 160437992 160438765 + protein_coding processed_transcript MGP_CBAJ_T0057737.1 MGP_CBAJ_G0026296.1 mouse_genomes_project 2 160438340 160438523 + MGP_CBAJ_P0057737 protein_coding protein_coding MGP_CBAJ_T0004114.1 MGP_CBAJ_G0003628.1 mouse_genomes_project 2 198973635 198975225 + Gm17180 antisense antisense MGP_CBAJ_T0013246.1 MGP_CBAJ_G0011358.1 mouse_genomes_project 2 9427379 9428376 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013459.1 MGP_CBAJ_G0011571.1 mouse_genomes_project 2 90481123 90481494 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013632.1 MGP_CBAJ_G0011744.1 mouse_genomes_project 2 165166917 165167312 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0054931.1 MGP_CBAJ_G0025541.1 mouse_genomes_project 2 77035531 77355229 + MGP_CBAJ_P0054931 Rapgef4 protein_coding protein_coding MGP_CBAJ_T0054932.1 MGP_CBAJ_G0025541.1 mouse_genomes_project 2 77035538 77098034 + Rapgef4 protein_coding processed_transcript MGP_CBAJ_T0054933.1 MGP_CBAJ_G0025541.1 mouse_genomes_project 2 77035550 77212901 + Rapgef4 protein_coding processed_transcript MGP_CBAJ_T0054934.1 MGP_CBAJ_G0025541.1 mouse_genomes_project 2 77035578 77354131 + MGP_CBAJ_P0054934 Rapgef4 protein_coding protein_coding MGP_CBAJ_T0054935.1 MGP_CBAJ_G0025541.1 mouse_genomes_project 2 77123162 77355227 + MGP_CBAJ_P0054935 Rapgef4 protein_coding protein_coding MGP_CBAJ_T0054936.1 MGP_CBAJ_G0025541.1 mouse_genomes_project 2 77123544 77213077 + Rapgef4 protein_coding processed_transcript MGP_CBAJ_T0054937.1 MGP_CBAJ_G0025541.1 mouse_genomes_project 2 77212310 77287542 + Rapgef4 protein_coding processed_transcript MGP_CBAJ_T0054938.1 MGP_CBAJ_G0025541.1 mouse_genomes_project 2 77212327 77250052 + Rapgef4 protein_coding processed_transcript MGP_CBAJ_T0054939.1 MGP_CBAJ_G0025541.1 mouse_genomes_project 2 77267448 77355227 + Rapgef4 protein_coding processed_transcript MGP_CBAJ_T0054940.1 MGP_CBAJ_G0025541.1 mouse_genomes_project 2 77290079 77299724 + Rapgef4 protein_coding processed_transcript MGP_CBAJ_T0054941.1 MGP_CBAJ_G0025541.1 mouse_genomes_project 2 77340432 77354410 + Rapgef4 protein_coding processed_transcript MGP_CBAJ_T0007262.1 MGP_CBAJ_G0005947.1 mouse_genomes_project 2 166771737 166774779 + Gm14155 lincRNA lincRNA MGP_CBAJ_T0057784.1 MGP_CBAJ_G0026313.1 mouse_genomes_project 2 163367015 163370928 + MGP_CBAJ_P0057784 8030411F24Rik protein_coding protein_coding MGP_CBAJ_T0053255.1 MGP_CBAJ_G0025250.1 mouse_genomes_project 2 29174745 29243072 - MGP_CBAJ_P0053255 Ntng2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053256.1 MGP_CBAJ_G0025250.1 mouse_genomes_project 2 29174998 29243046 - MGP_CBAJ_P0053256 Ntng2 protein_coding protein_coding MGP_CBAJ_T0053257.1 MGP_CBAJ_G0025250.1 mouse_genomes_project 2 29175025 29242987 - MGP_CBAJ_P0053257 Ntng2 protein_coding protein_coding MGP_CBAJ_T0053258.1 MGP_CBAJ_G0025250.1 mouse_genomes_project 2 29175025 29242987 - MGP_CBAJ_P0053258 Ntng2 protein_coding protein_coding MGP_CBAJ_T0053259.1 MGP_CBAJ_G0025250.1 mouse_genomes_project 2 29175025 29242987 - MGP_CBAJ_P0053259 Ntng2 protein_coding protein_coding MGP_CBAJ_T0053260.1 MGP_CBAJ_G0025250.1 mouse_genomes_project 2 29181192 29190007 - Ntng2 protein_coding processed_transcript MGP_CBAJ_T0053261.1 MGP_CBAJ_G0025250.1 mouse_genomes_project 2 29181365 29190905 - Ntng2 protein_coding processed_transcript MGP_CBAJ_T0053262.1 MGP_CBAJ_G0025250.1 mouse_genomes_project 2 29186544 29190007 - Ntng2 protein_coding processed_transcript MGP_CBAJ_T0053263.1 MGP_CBAJ_G0025250.1 mouse_genomes_project 2 29186658 29190905 - Ntng2 protein_coding processed_transcript MGP_CBAJ_T0053264.1 MGP_CBAJ_G0025250.1 mouse_genomes_project 2 29189804 29247952 - MGP_CBAJ_P0053264 Ntng2 protein_coding protein_coding MGP_CBAJ_T0053265.1 MGP_CBAJ_G0025250.1 mouse_genomes_project 2 29219499 29243079 - Ntng2 protein_coding processed_transcript MGP_CBAJ_T0013684.1 MGP_CBAJ_G0011796.1 mouse_genomes_project 2 184565135 184565494 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0056144.1 MGP_CBAJ_G0025921.1 mouse_genomes_project 2 114262436 114285627 - MGP_CBAJ_P0056144 Prrg4 protein_coding protein_coding MGP_CBAJ_T0056145.1 MGP_CBAJ_G0025921.1 mouse_genomes_project 2 114273213 114285244 - MGP_CBAJ_P0056145 Prrg4 protein_coding protein_coding MGP_CBAJ_T0101770.1 MGP_CBAJ_G0039801.1 mouse_genomes_project 2 6735668 6738079 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0054299.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47088488 47230400 - MGP_CBAJ_P0054299 Zeb2 protein_coding protein_coding MGP_CBAJ_T0054300.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47091983 47224326 - MGP_CBAJ_P0054300 Zeb2 protein_coding protein_coding MGP_CBAJ_T0054301.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47091985 47221852 - MGP_CBAJ_P0054301 Zeb2 protein_coding protein_coding MGP_CBAJ_T0054302.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47091985 47224620 - MGP_CBAJ_P0054302 Zeb2 protein_coding protein_coding MGP_CBAJ_T0054303.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47093196 47224343 - MGP_CBAJ_P0054303 Zeb2 protein_coding protein_coding MGP_CBAJ_T0054304.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47093262 47221625 - MGP_CBAJ_P0054304 Zeb2 protein_coding protein_coding MGP_CBAJ_T0054305.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47093303 47224231 - MGP_CBAJ_P0054305 Zeb2 protein_coding protein_coding MGP_CBAJ_T0054306.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47101682 47221789 - MGP_CBAJ_P0054306 Zeb2 protein_coding protein_coding MGP_CBAJ_T0054307.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47106571 47222510 - MGP_CBAJ_P0054307 Zeb2 protein_coding protein_coding MGP_CBAJ_T0054308.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47106596 47132889 - MGP_CBAJ_P0054308 Zeb2 protein_coding protein_coding MGP_CBAJ_T0054309.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47106662 47221581 - MGP_CBAJ_P0054309 Zeb2 protein_coding protein_coding MGP_CBAJ_T0054310.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47107561 47163895 - Zeb2 protein_coding processed_transcript MGP_CBAJ_T0054311.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47107563 47222492 - MGP_CBAJ_P0054311 Zeb2 protein_coding protein_coding MGP_CBAJ_T0054312.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47115377 47222412 - Zeb2 protein_coding processed_transcript MGP_CBAJ_T0054313.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47124220 47224609 - MGP_CBAJ_P0054313 Zeb2 protein_coding protein_coding MGP_CBAJ_T0054314.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47130866 47224430 - Zeb2 protein_coding retained_intron MGP_CBAJ_T0054315.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47130878 47224586 - Zeb2 protein_coding retained_intron MGP_CBAJ_T0054316.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47132877 47221964 - MGP_CBAJ_P0054316 Zeb2 protein_coding protein_coding MGP_CBAJ_T0054317.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47132962 47224625 - MGP_CBAJ_P0054317 Zeb2 protein_coding protein_coding MGP_CBAJ_T0054318.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47133033 47222091 - MGP_CBAJ_P0054318 Zeb2 protein_coding protein_coding MGP_CBAJ_T0054319.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47205247 47222070 - MGP_CBAJ_P0054319 Zeb2 protein_coding protein_coding MGP_CBAJ_T0054320.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47215391 47224589 - Zeb2 protein_coding processed_transcript MGP_CBAJ_T0054321.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47215391 47221824 - Zeb2 protein_coding processed_transcript MGP_CBAJ_T0054322.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47215391 47224557 - Zeb2 protein_coding processed_transcript MGP_CBAJ_T0054323.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47216616 47221413 - Zeb2 protein_coding processed_transcript MGP_CBAJ_T0054324.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47217477 47221821 - Zeb2 protein_coding processed_transcript MGP_CBAJ_T0054325.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47217836 47224342 - Zeb2 protein_coding retained_intron MGP_CBAJ_T0054326.1 MGP_CBAJ_G0025430.1 mouse_genomes_project 2 47221425 47226538 - Zeb2 protein_coding processed_transcript MGP_CBAJ_T0057297.1 MGP_CBAJ_G0026203.1 mouse_genomes_project 2 143117717 143124719 - Pced1a protein_coding processed_transcript MGP_CBAJ_T0057298.1 MGP_CBAJ_G0026203.1 mouse_genomes_project 2 143118152 143124749 - MGP_CBAJ_P0057298 Pced1a protein_coding protein_coding MGP_CBAJ_T0057299.1 MGP_CBAJ_G0026203.1 mouse_genomes_project 2 143118675 143124752 - Pced1a protein_coding processed_transcript MGP_CBAJ_T0057300.1 MGP_CBAJ_G0026203.1 mouse_genomes_project 2 143118699 143124737 - Pced1a protein_coding retained_intron MGP_CBAJ_T0057301.1 MGP_CBAJ_G0026203.1 mouse_genomes_project 2 143119428 143125158 - MGP_CBAJ_P0057301 Pced1a protein_coding protein_coding MGP_CBAJ_T0057302.1 MGP_CBAJ_G0026203.1 mouse_genomes_project 2 143119439 143125172 - Pced1a protein_coding retained_intron MGP_CBAJ_T0057303.1 MGP_CBAJ_G0026203.1 mouse_genomes_project 2 143122359 143124781 - Pced1a protein_coding retained_intron MGP_CBAJ_T0052037.1 MGP_CBAJ_G0025032.1 mouse_genomes_project 2 2224120 2247274 - Optn protein_coding processed_transcript MGP_CBAJ_T0052038.1 MGP_CBAJ_G0025032.1 mouse_genomes_project 2 2224120 2281079 - MGP_CBAJ_P0052038 Optn protein_coding protein_coding MGP_CBAJ_T0052039.1 MGP_CBAJ_G0025032.1 mouse_genomes_project 2 2224122 2280972 - MGP_CBAJ_P0052039 Optn protein_coding protein_coding MGP_CBAJ_T0052040.1 MGP_CBAJ_G0025032.1 mouse_genomes_project 2 2224779 2248568 - Optn protein_coding processed_transcript MGP_CBAJ_T0052041.1 MGP_CBAJ_G0025032.1 mouse_genomes_project 2 2260946 2281085 - Optn protein_coding processed_transcript MGP_CBAJ_T0057629.1 MGP_CBAJ_G0026273.1 mouse_genomes_project 2 157046746 157056552 + MGP_CBAJ_P0057629 Snrpb2 protein_coding protein_coding MGP_CBAJ_T0057630.1 MGP_CBAJ_G0026273.1 mouse_genomes_project 2 157046768 157049442 + Snrpb2 protein_coding retained_intron MGP_CBAJ_T0057631.1 MGP_CBAJ_G0026273.1 mouse_genomes_project 2 157046838 157053123 + MGP_CBAJ_P0057631 Snrpb2 protein_coding protein_coding MGP_CBAJ_T0057632.1 MGP_CBAJ_G0026273.1 mouse_genomes_project 2 157048109 157053123 + Snrpb2 protein_coding retained_intron MGP_CBAJ_T0057633.1 MGP_CBAJ_G0026273.1 mouse_genomes_project 2 157051880 157056552 + Snrpb2 protein_coding retained_intron MGP_CBAJ_T0055562.1 MGP_CBAJ_G0025812.1 mouse_genomes_project 2 97484940 97498635 + MGP_CBAJ_P0055562 Olfr1257 protein_coding protein_coding MGP_CBAJ_T0055563.1 MGP_CBAJ_G0025812.1 mouse_genomes_project 2 97497671 97498687 + MGP_CBAJ_P0055563 Olfr1257 protein_coding protein_coding MGP_CBAJ_T0017605.1 MGP_CBAJ_G0015208.1 mouse_genomes_project 2 137200790 137210567 - Gm14004 processed_transcript processed_transcript MGP_CBAJ_T0052064.1 MGP_CBAJ_G0025038.1 mouse_genomes_project 2 3216926 3241141 - MGP_CBAJ_P0052064 Sec61a2 protein_coding protein_coding MGP_CBAJ_T0052065.1 MGP_CBAJ_G0025038.1 mouse_genomes_project 2 3216968 3241043 - MGP_CBAJ_P0052065 Sec61a2 protein_coding protein_coding MGP_CBAJ_T0052066.1 MGP_CBAJ_G0025038.1 mouse_genomes_project 2 3217534 3222408 - MGP_CBAJ_P0052066 Sec61a2 protein_coding protein_coding MGP_CBAJ_T0052067.1 MGP_CBAJ_G0025038.1 mouse_genomes_project 2 3217932 3220736 - Sec61a2 protein_coding processed_transcript MGP_CBAJ_T0052068.1 MGP_CBAJ_G0025038.1 mouse_genomes_project 2 3219350 3220230 - Sec61a2 protein_coding processed_transcript MGP_CBAJ_T0052069.1 MGP_CBAJ_G0025038.1 mouse_genomes_project 2 3219737 3222972 - Sec61a2 protein_coding processed_transcript MGP_CBAJ_T0052070.1 MGP_CBAJ_G0025038.1 mouse_genomes_project 2 3222353 3223939 - Sec61a2 protein_coding processed_transcript MGP_CBAJ_T0052071.1 MGP_CBAJ_G0025038.1 mouse_genomes_project 2 3222421 3224320 - Sec61a2 protein_coding processed_transcript MGP_CBAJ_T0052072.1 MGP_CBAJ_G0025038.1 mouse_genomes_project 2 3223803 3241028 - MGP_CBAJ_P0052072 Sec61a2 protein_coding protein_coding MGP_CBAJ_T0052073.1 MGP_CBAJ_G0025038.1 mouse_genomes_project 2 3227796 3241043 - Sec61a2 protein_coding retained_intron MGP_CBAJ_T0053651.1 MGP_CBAJ_G0025306.1 mouse_genomes_project 2 32480188 32568620 + MGP_CBAJ_P0053651 Nup214 protein_coding protein_coding MGP_CBAJ_T0053652.1 MGP_CBAJ_G0025306.1 mouse_genomes_project 2 32480238 32494734 + Nup214 protein_coding retained_intron MGP_CBAJ_T0053653.1 MGP_CBAJ_G0025306.1 mouse_genomes_project 2 32494549 32506139 + Nup214 protein_coding processed_transcript MGP_CBAJ_T0053654.1 MGP_CBAJ_G0025306.1 mouse_genomes_project 2 32509621 32513498 + Nup214 protein_coding processed_transcript MGP_CBAJ_T0053655.1 MGP_CBAJ_G0025306.1 mouse_genomes_project 2 32512761 32518702 + MGP_CBAJ_P0053655 Nup214 protein_coding protein_coding MGP_CBAJ_T0053656.1 MGP_CBAJ_G0025306.1 mouse_genomes_project 2 32526473 32527847 + Nup214 protein_coding processed_transcript MGP_CBAJ_T0053657.1 MGP_CBAJ_G0025306.1 mouse_genomes_project 2 32541503 32548011 + Nup214 protein_coding processed_transcript MGP_CBAJ_T0053658.1 MGP_CBAJ_G0025306.1 mouse_genomes_project 2 32548699 32570413 + MGP_CBAJ_P0053658 Nup214 protein_coding protein_coding MGP_CBAJ_T0053659.1 MGP_CBAJ_G0025306.1 mouse_genomes_project 2 32558806 32568616 + MGP_CBAJ_P0053659 Nup214 protein_coding protein_coding MGP_CBAJ_T0053661.1 MGP_CBAJ_G0025306.1 mouse_genomes_project 2 32567243 32569103 + Nup214 protein_coding retained_intron MGP_CBAJ_T0053662.1 MGP_CBAJ_G0025306.1 mouse_genomes_project 2 32567940 32568614 + Nup214 protein_coding retained_intron MGP_CBAJ_T0013696.1 MGP_CBAJ_G0011808.1 mouse_genomes_project 2 198003219 198003806 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0057513.1 MGP_CBAJ_G0026246.1 mouse_genomes_project 2 145871812 145899531 + MGP_CBAJ_P0057513 Mcm8 protein_coding protein_coding MGP_CBAJ_T0057514.1 MGP_CBAJ_G0026246.1 mouse_genomes_project 2 145871812 145899230 + MGP_CBAJ_P0057514 Mcm8 protein_coding protein_coding MGP_CBAJ_T0057515.1 MGP_CBAJ_G0026246.1 mouse_genomes_project 2 145871895 145873696 + Mcm8 protein_coding processed_transcript MGP_CBAJ_T0099127.1 MGP_CBAJ_G0037382.1 mouse_genomes_project 2 138896293 138896442 - Gm23753 snRNA snRNA MGP_CBAJ_T0053985.1 MGP_CBAJ_G0025354.1 mouse_genomes_project 2 35711732 35731888 - Fbxw2 protein_coding processed_transcript MGP_CBAJ_T0053986.1 MGP_CBAJ_G0025354.1 mouse_genomes_project 2 35712396 35735041 - MGP_CBAJ_P0053986 Fbxw2 protein_coding protein_coding MGP_CBAJ_T0053987.1 MGP_CBAJ_G0025354.1 mouse_genomes_project 2 35712556 35732149 - MGP_CBAJ_P0053987 Fbxw2 protein_coding protein_coding MGP_CBAJ_T0053988.1 MGP_CBAJ_G0025354.1 mouse_genomes_project 2 35712557 35735203 - MGP_CBAJ_P0053988 Fbxw2 protein_coding protein_coding MGP_CBAJ_T0053989.1 MGP_CBAJ_G0025354.1 mouse_genomes_project 2 35712559 35735198 - MGP_CBAJ_P0053989 Fbxw2 protein_coding protein_coding MGP_CBAJ_T0053990.1 MGP_CBAJ_G0025354.1 mouse_genomes_project 2 35712559 35735039 - MGP_CBAJ_P0053990 Fbxw2 protein_coding protein_coding MGP_CBAJ_T0053991.1 MGP_CBAJ_G0025354.1 mouse_genomes_project 2 35713471 35735169 - MGP_CBAJ_P0053991 Fbxw2 protein_coding protein_coding MGP_CBAJ_T0053992.1 MGP_CBAJ_G0025354.1 mouse_genomes_project 2 35714496 35715865 - Fbxw2 protein_coding processed_transcript MGP_CBAJ_T0053993.1 MGP_CBAJ_G0025354.1 mouse_genomes_project 2 35719038 35735279 - Fbxw2 protein_coding processed_transcript MGP_CBAJ_T0053994.1 MGP_CBAJ_G0025354.1 mouse_genomes_project 2 35719937 35735135 - Fbxw2 protein_coding processed_transcript MGP_CBAJ_T0053995.1 MGP_CBAJ_G0025354.1 mouse_genomes_project 2 35722467 35735185 - Fbxw2 protein_coding processed_transcript MGP_CBAJ_T0053996.1 MGP_CBAJ_G0025354.1 mouse_genomes_project 2 35730824 35735175 - Fbxw2 protein_coding retained_intron MGP_CBAJ_T0053997.1 MGP_CBAJ_G0025354.1 mouse_genomes_project 2 35731571 35734990 - Fbxw2 protein_coding processed_transcript MGP_CBAJ_T0053998.1 MGP_CBAJ_G0025354.1 mouse_genomes_project 2 35734230 35735183 - Fbxw2 protein_coding processed_transcript MGP_CBAJ_T0059147.1 MGP_CBAJ_G0026630.1 mouse_genomes_project 2 188402705 188417051 - MGP_CBAJ_P0059147 Cyp24a1 protein_coding protein_coding MGP_CBAJ_T0001014.1 MGP_CBAJ_G0000946.1 mouse_genomes_project 2 13108475 13109884 + TEC TEC MGP_CBAJ_T0098199.1 MGP_CBAJ_G0036472.1 mouse_genomes_project 2 189338968 189339232 - Gm26489 scaRNA scaRNA MGP_CBAJ_T0001067.1 MGP_CBAJ_G0000998.1 mouse_genomes_project 2 187395182 187399445 - TEC TEC MGP_CBAJ_T0058616.1 MGP_CBAJ_G0026502.1 mouse_genomes_project 2 177159171 177186629 + MGP_CBAJ_P0058616 Lpin3 protein_coding protein_coding MGP_CBAJ_T0058617.1 MGP_CBAJ_G0026502.1 mouse_genomes_project 2 177166563 177186634 + MGP_CBAJ_P0058617 Lpin3 protein_coding protein_coding MGP_CBAJ_T0058618.1 MGP_CBAJ_G0026502.1 mouse_genomes_project 2 177166563 177186634 + MGP_CBAJ_P0058618 Lpin3 protein_coding protein_coding MGP_CBAJ_T0058619.1 MGP_CBAJ_G0026502.1 mouse_genomes_project 2 177166626 177186424 + MGP_CBAJ_P0058619 Lpin3 protein_coding protein_coding MGP_CBAJ_T0058620.1 MGP_CBAJ_G0026502.1 mouse_genomes_project 2 177182180 177184369 + Lpin3 protein_coding processed_transcript MGP_CBAJ_T0057758.1 MGP_CBAJ_G0026302.1 mouse_genomes_project 2 161557485 161569546 - MGP_CBAJ_P0057758 Nkx2-2 protein_coding protein_coding MGP_CBAJ_T0057759.1 MGP_CBAJ_G0026302.1 mouse_genomes_project 2 161566664 161569851 - MGP_CBAJ_P0057759 Nkx2-2 protein_coding protein_coding MGP_CBAJ_T0057760.1 MGP_CBAJ_G0026302.1 mouse_genomes_project 2 161569751 161584446 - Nkx2-2 protein_coding processed_transcript MGP_CBAJ_T0057761.1 MGP_CBAJ_G0026302.1 mouse_genomes_project 2 161569828 161584445 - Nkx2-2 protein_coding processed_transcript MGP_CBAJ_T0055555.1 MGP_CBAJ_G0025807.1 mouse_genomes_project 2 97330058 97331075 - MGP_CBAJ_P0055555 Olfr1252 protein_coding protein_coding MGP_CBAJ_T0013664.1 MGP_CBAJ_G0011776.1 mouse_genomes_project 2 174388824 174389135 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007095.1 MGP_CBAJ_G0005812.1 mouse_genomes_project 2 50478107 50918549 - lincRNA lincRNA MGP_CBAJ_T0011400.1 MGP_CBAJ_G0009538.1 mouse_genomes_project 2 199795458 199795576 + Gm22842 misc_RNA misc_RNA MGP_CBAJ_T0057700.1 MGP_CBAJ_G0026291.1 mouse_genomes_project 2 158984615 158985375 + MGP_CBAJ_P0057700 Scp2d1 protein_coding protein_coding MGP_CBAJ_T0057388.1 MGP_CBAJ_G0026221.1 mouse_genomes_project 2 143948671 143949390 + MGP_CBAJ_P0057388 Gm11037 protein_coding protein_coding MGP_CBAJ_T0004014.1 MGP_CBAJ_G0003554.1 mouse_genomes_project 2 144433765 144435331 + Gm14285 antisense antisense MGP_CBAJ_T0099112.1 MGP_CBAJ_G0037367.1 mouse_genomes_project 2 85204276 85204379 + Gm22606 snRNA snRNA MGP_CBAJ_T0055053.1 MGP_CBAJ_G0025569.1 mouse_genomes_project 2 81144983 81154759 + MGP_CBAJ_P0055053 Hnrnpa3 protein_coding protein_coding MGP_CBAJ_T0055054.1 MGP_CBAJ_G0025569.1 mouse_genomes_project 2 81144996 81147888 + Hnrnpa3 protein_coding retained_intron MGP_CBAJ_T0055055.1 MGP_CBAJ_G0025569.1 mouse_genomes_project 2 81148343 81151227 + MGP_CBAJ_P0055055 Hnrnpa3 protein_coding protein_coding MGP_CBAJ_T0058344.1 MGP_CBAJ_G0026454.1 mouse_genomes_project 2 171760694 171762449 + MGP_CBAJ_P0058344 Romo1 protein_coding protein_coding MGP_CBAJ_T0058345.1 MGP_CBAJ_G0026454.1 mouse_genomes_project 2 171760888 171762446 + MGP_CBAJ_P0058345 Romo1 protein_coding protein_coding MGP_CBAJ_T0058346.1 MGP_CBAJ_G0026454.1 mouse_genomes_project 2 171760892 171762435 + MGP_CBAJ_P0058346 Romo1 protein_coding protein_coding MGP_CBAJ_T0058347.1 MGP_CBAJ_G0026454.1 mouse_genomes_project 2 171760895 171762446 + MGP_CBAJ_P0058347 Romo1 protein_coding protein_coding MGP_CBAJ_T0052600.1 MGP_CBAJ_G0025127.1 mouse_genomes_project 2 24346367 24356113 + MGP_CBAJ_P0052600 Dph7 protein_coding protein_coding MGP_CBAJ_T0052601.1 MGP_CBAJ_G0025127.1 mouse_genomes_project 2 24346389 24356111 + MGP_CBAJ_P0052601 Dph7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052602.1 MGP_CBAJ_G0025127.1 mouse_genomes_project 2 24346419 24350505 + MGP_CBAJ_P0052602 Dph7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052603.1 MGP_CBAJ_G0025127.1 mouse_genomes_project 2 24346433 24356113 + Dph7 protein_coding retained_intron MGP_CBAJ_T0052604.1 MGP_CBAJ_G0025127.1 mouse_genomes_project 2 24346440 24353621 + MGP_CBAJ_P0052604 Dph7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052355.1 MGP_CBAJ_G0025083.1 mouse_genomes_project 2 16810363 16822902 - MGP_CBAJ_P0052355 A930004D18Rik protein_coding protein_coding MGP_CBAJ_T0052356.1 MGP_CBAJ_G0025083.1 mouse_genomes_project 2 16813096 16813931 - A930004D18Rik protein_coding processed_transcript MGP_CBAJ_T0052357.1 MGP_CBAJ_G0025083.1 mouse_genomes_project 2 16813144 16814042 - A930004D18Rik protein_coding processed_transcript MGP_CBAJ_T0099118.1 MGP_CBAJ_G0037373.1 mouse_genomes_project 2 112070804 112070911 + Gm23731 snRNA snRNA MGP_CBAJ_T0003887.1 MGP_CBAJ_G0003467.1 mouse_genomes_project 2 36845441 36849637 + 9030204H09Rik antisense antisense MGP_CBAJ_T0058862.1 MGP_CBAJ_G0026578.1 mouse_genomes_project 2 181758073 181769415 + MGP_CBAJ_P0058862 Mmp9 protein_coding protein_coding MGP_CBAJ_T0058863.1 MGP_CBAJ_G0026578.1 mouse_genomes_project 2 181768740 181776385 + MGP_CBAJ_P0058863 Mmp9 protein_coding protein_coding MGP_CBAJ_T0058864.1 MGP_CBAJ_G0026578.1 mouse_genomes_project 2 181771221 181771788 + Mmp9 protein_coding retained_intron MGP_CBAJ_T0058865.1 MGP_CBAJ_G0026578.1 mouse_genomes_project 2 181774920 181776385 + Mmp9 protein_coding processed_transcript MGP_CBAJ_T0013557.1 MGP_CBAJ_G0011669.1 mouse_genomes_project 2 131158742 131159077 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055825.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100197952 100393758 + MGP_CBAJ_P0055825 Phf21a protein_coding protein_coding MGP_CBAJ_T0055826.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100198021 100393764 + MGP_CBAJ_P0055826 Phf21a protein_coding protein_coding MGP_CBAJ_T0055827.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100198114 100236846 + Phf21a protein_coding processed_transcript MGP_CBAJ_T0055828.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100198122 100345451 + MGP_CBAJ_P0055828 Phf21a protein_coding protein_coding MGP_CBAJ_T0055829.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100198122 100392822 + MGP_CBAJ_P0055829 Phf21a protein_coding protein_coding MGP_CBAJ_T0055830.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100198148 100237355 + Phf21a protein_coding retained_intron MGP_CBAJ_T0055831.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100198148 100244346 + MGP_CBAJ_P0055831 Phf21a protein_coding protein_coding MGP_CBAJ_T0055832.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100198638 100251264 + MGP_CBAJ_P0055832 Phf21a protein_coding protein_coding MGP_CBAJ_T0055833.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100200677 100244349 + MGP_CBAJ_P0055833 Phf21a protein_coding protein_coding MGP_CBAJ_T0055834.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100200701 100392830 + MGP_CBAJ_P0055834 Phf21a protein_coding protein_coding MGP_CBAJ_T0055835.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100201683 100244361 + MGP_CBAJ_P0055835 Phf21a protein_coding protein_coding MGP_CBAJ_T0055836.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100244208 100396595 + MGP_CBAJ_P0055836 Phf21a protein_coding protein_coding MGP_CBAJ_T0055837.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100244208 100396595 + MGP_CBAJ_P0055837 Phf21a protein_coding protein_coding MGP_CBAJ_T0055838.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100244208 100396595 + MGP_CBAJ_P0055838 Phf21a protein_coding protein_coding MGP_CBAJ_T0055839.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100244208 100396595 + MGP_CBAJ_P0055839 Phf21a protein_coding protein_coding MGP_CBAJ_T0055840.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100244318 100396595 + MGP_CBAJ_P0055840 Phf21a protein_coding protein_coding MGP_CBAJ_T0055841.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100244326 100352286 + MGP_CBAJ_P0055841 Phf21a protein_coding protein_coding MGP_CBAJ_T0055842.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100251267 100392359 + MGP_CBAJ_P0055842 Phf21a protein_coding protein_coding MGP_CBAJ_T0055843.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100345610 100357145 + MGP_CBAJ_P0055843 Phf21a protein_coding protein_coding MGP_CBAJ_T0055844.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100357173 100391106 + MGP_CBAJ_P0055844 Phf21a protein_coding protein_coding MGP_CBAJ_T0055845.1 MGP_CBAJ_G0025862.1 mouse_genomes_project 2 100380839 100388922 + Phf21a protein_coding retained_intron MGP_CBAJ_T0004096.1 MGP_CBAJ_G0003616.1 mouse_genomes_project 2 185456344 185457322 + Gm14236 antisense antisense MGP_CBAJ_T0053598.1 MGP_CBAJ_G0025296.1 mouse_genomes_project 2 31675662 31842736 + MGP_CBAJ_P0053598 Hmcn2 protein_coding protein_coding MGP_CBAJ_T0053599.1 MGP_CBAJ_G0025296.1 mouse_genomes_project 2 31675662 31842393 + MGP_CBAJ_P0053599 Hmcn2 protein_coding unknown_likely_coding MGP_CBAJ_T0053600.1 MGP_CBAJ_G0025296.1 mouse_genomes_project 2 31765876 31771412 + MGP_CBAJ_P0053600 Hmcn2 protein_coding protein_coding MGP_CBAJ_T0053601.1 MGP_CBAJ_G0025296.1 mouse_genomes_project 2 31806549 31842721 + Hmcn2 protein_coding retained_intron MGP_CBAJ_T0053602.1 MGP_CBAJ_G0025296.1 mouse_genomes_project 2 31815207 31842735 + Hmcn2 protein_coding processed_transcript MGP_CBAJ_T0053603.1 MGP_CBAJ_G0025296.1 mouse_genomes_project 2 31831736 31839921 + Hmcn2 protein_coding retained_intron MGP_CBAJ_T0056131.1 MGP_CBAJ_G0025917.1 mouse_genomes_project 2 114071055 114101535 - Tcp11l1 protein_coding processed_transcript MGP_CBAJ_T0056134.1 MGP_CBAJ_G0025917.1 mouse_genomes_project 2 114095251 114126471 - MGP_CBAJ_P0056134 Tcp11l1 protein_coding protein_coding MGP_CBAJ_T0056135.1 MGP_CBAJ_G0025917.1 mouse_genomes_project 2 114097211 114126477 - MGP_CBAJ_P0056135 Tcp11l1 protein_coding protein_coding MGP_CBAJ_T0056136.1 MGP_CBAJ_G0025917.1 mouse_genomes_project 2 114102048 114126484 - Tcp11l1 protein_coding retained_intron MGP_CBAJ_T0056137.1 MGP_CBAJ_G0025917.1 mouse_genomes_project 2 114111827 114120787 - Tcp11l1 protein_coding processed_transcript MGP_CBAJ_T0056138.1 MGP_CBAJ_G0025917.1 mouse_genomes_project 2 114113373 114126408 - Tcp11l1 protein_coding processed_transcript MGP_CBAJ_T0056139.1 MGP_CBAJ_G0025917.1 mouse_genomes_project 2 114119269 114126481 - Tcp11l1 protein_coding processed_transcript MGP_CBAJ_T0101773.1 MGP_CBAJ_G0039804.1 mouse_genomes_project 2 21683519 21684191 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013665.1 MGP_CBAJ_G0011777.1 mouse_genomes_project 2 174455666 174455858 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017641.1 MGP_CBAJ_G0015227.1 mouse_genomes_project 2 174063945 174064697 + Gm20412 processed_transcript processed_transcript MGP_CBAJ_T0054327.1 MGP_CBAJ_G0025431.1 mouse_genomes_project 2 51291747 51388875 + MGP_CBAJ_P0054327 Acvr2a protein_coding protein_coding MGP_CBAJ_T0054328.1 MGP_CBAJ_G0025431.1 mouse_genomes_project 2 51375954 51385854 + Acvr2a protein_coding processed_transcript MGP_CBAJ_T0001003.1 MGP_CBAJ_G0000935.1 mouse_genomes_project 2 11224979 11227580 + TEC TEC MGP_CBAJ_T0001047.1 MGP_CBAJ_G0000979.1 mouse_genomes_project 2 73505193 73508406 + TEC TEC MGP_CBAJ_T0054444.1 MGP_CBAJ_G0025451.1 mouse_genomes_project 2 56167451 56194220 + Arl6ip6 protein_coding processed_transcript MGP_CBAJ_T0054445.1 MGP_CBAJ_G0025451.1 mouse_genomes_project 2 56167813 56195904 + MGP_CBAJ_P0054445 Arl6ip6 protein_coding protein_coding MGP_CBAJ_T0055484.1 MGP_CBAJ_G0025749.1 mouse_genomes_project 2 95173524 95174469 - MGP_CBAJ_P0055484 Olfr1162 protein_coding protein_coding MGP_CBAJ_T0055485.1 MGP_CBAJ_G0025749.1 mouse_genomes_project 2 95173524 95174959 - MGP_CBAJ_P0055485 Olfr1162 protein_coding protein_coding MGP_CBAJ_T0001037.1 MGP_CBAJ_G0000969.1 mouse_genomes_project 2 39272502 39275369 - TEC TEC MGP_CBAJ_T0053228.1 MGP_CBAJ_G0025244.1 mouse_genomes_project 2 28752583 28770641 - MGP_CBAJ_P0053228 Gtf3c4 protein_coding protein_coding MGP_CBAJ_T0053229.1 MGP_CBAJ_G0025244.1 mouse_genomes_project 2 28752589 28770567 - MGP_CBAJ_P0053229 Gtf3c4 protein_coding protein_coding MGP_CBAJ_T0053230.1 MGP_CBAJ_G0025244.1 mouse_genomes_project 2 28765484 28770567 - Gtf3c4 protein_coding processed_transcript MGP_CBAJ_T0053231.1 MGP_CBAJ_G0025244.1 mouse_genomes_project 2 28765584 28770633 - Gtf3c4 protein_coding processed_transcript MGP_CBAJ_T0054217.1 MGP_CBAJ_G0025417.1 mouse_genomes_project 2 39965653 40208266 - MGP_CBAJ_P0054217 Nr6a1 protein_coding protein_coding MGP_CBAJ_T0054218.1 MGP_CBAJ_G0025417.1 mouse_genomes_project 2 39965657 40206841 - MGP_CBAJ_P0054218 Nr6a1 protein_coding protein_coding MGP_CBAJ_T0054219.1 MGP_CBAJ_G0025417.1 mouse_genomes_project 2 39965657 40035144 - MGP_CBAJ_P0054219 Nr6a1 protein_coding protein_coding MGP_CBAJ_T0054220.1 MGP_CBAJ_G0025417.1 mouse_genomes_project 2 39981509 39984377 - Nr6a1 protein_coding processed_transcript MGP_CBAJ_T0054221.1 MGP_CBAJ_G0025417.1 mouse_genomes_project 2 39982639 39986870 - Nr6a1 protein_coding processed_transcript MGP_CBAJ_T0054222.1 MGP_CBAJ_G0025417.1 mouse_genomes_project 2 39983047 40035149 - MGP_CBAJ_P0054222 Nr6a1 protein_coding protein_coding MGP_CBAJ_T0054223.1 MGP_CBAJ_G0025417.1 mouse_genomes_project 2 39984336 40035740 - Nr6a1 protein_coding processed_transcript MGP_CBAJ_T0054224.1 MGP_CBAJ_G0025417.1 mouse_genomes_project 2 39984455 40206899 - MGP_CBAJ_P0054224 Nr6a1 protein_coding protein_coding MGP_CBAJ_T0054225.1 MGP_CBAJ_G0025417.1 mouse_genomes_project 2 39986353 40035098 - Nr6a1 protein_coding processed_transcript MGP_CBAJ_T0054226.1 MGP_CBAJ_G0025417.1 mouse_genomes_project 2 39986869 40011598 - Nr6a1 protein_coding retained_intron MGP_CBAJ_T0054227.1 MGP_CBAJ_G0025417.1 mouse_genomes_project 2 40032561 40035098 - Nr6a1 protein_coding processed_transcript MGP_CBAJ_T0007275.1 MGP_CBAJ_G0005957.1 mouse_genomes_project 2 174333051 174333183 - Gm23925 lincRNA lincRNA MGP_CBAJ_T0013498.1 MGP_CBAJ_G0011610.1 mouse_genomes_project 2 105491322 105491992 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013280.1 MGP_CBAJ_G0011392.1 mouse_genomes_project 2 21891888 21892223 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055016.1 MGP_CBAJ_G0025556.1 mouse_genomes_project 2 79865132 79942524 - MGP_CBAJ_P0055016 Lnpk1 protein_coding protein_coding MGP_CBAJ_T0055017.1 MGP_CBAJ_G0025556.1 mouse_genomes_project 2 79865175 79942524 - MGP_CBAJ_P0055017 Lnpk1 protein_coding protein_coding MGP_CBAJ_T0055018.1 MGP_CBAJ_G0025556.1 mouse_genomes_project 2 79865182 79879958 - Lnpk1 protein_coding processed_transcript MGP_CBAJ_T0055019.1 MGP_CBAJ_G0025556.1 mouse_genomes_project 2 79866174 79942507 - Lnpk1 protein_coding processed_transcript MGP_CBAJ_T0055020.1 MGP_CBAJ_G0025556.1 mouse_genomes_project 2 79866882 79941799 - MGP_CBAJ_P0055020 Lnpk1 protein_coding protein_coding MGP_CBAJ_T0055021.1 MGP_CBAJ_G0025556.1 mouse_genomes_project 2 79878760 79942955 - MGP_CBAJ_P0055021 Lnpk1 protein_coding protein_coding MGP_CBAJ_T0055022.1 MGP_CBAJ_G0025556.1 mouse_genomes_project 2 79884257 79942093 - MGP_CBAJ_P0055022 Lnpk1 protein_coding protein_coding MGP_CBAJ_T0055023.1 MGP_CBAJ_G0025556.1 mouse_genomes_project 2 79898702 79910231 - Lnpk1 protein_coding processed_transcript MGP_CBAJ_T0055024.1 MGP_CBAJ_G0025556.1 mouse_genomes_project 2 79899328 79943011 - Lnpk1 protein_coding processed_transcript MGP_CBAJ_T0055025.1 MGP_CBAJ_G0025556.1 mouse_genomes_project 2 79903347 79942492 - Lnpk1 protein_coding processed_transcript MGP_CBAJ_T0055026.1 MGP_CBAJ_G0025556.1 mouse_genomes_project 2 79925662 79942456 - Lnpk1 protein_coding processed_transcript MGP_CBAJ_T0055027.1 MGP_CBAJ_G0025556.1 mouse_genomes_project 2 79925927 79942470 - MGP_CBAJ_P0055027 Lnpk1 protein_coding protein_coding MGP_CBAJ_T0053505.1 MGP_CBAJ_G0025283.1 mouse_genomes_project 2 30827793 30844774 + MGP_CBAJ_P0053505 Cstad protein_coding protein_coding MGP_CBAJ_T0053506.1 MGP_CBAJ_G0025283.1 mouse_genomes_project 2 30841048 30844048 + Cstad protein_coding processed_transcript MGP_CBAJ_T0003995.1 MGP_CBAJ_G0003540.1 mouse_genomes_project 2 132719566 132721854 - Gm14978 antisense antisense MGP_CBAJ_T0013547.1 MGP_CBAJ_G0011659.1 mouse_genomes_project 2 122796509 122799774 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010287.1 MGP_CBAJ_G0008425.1 mouse_genomes_project 2 44261077 44261207 - Mir6336 miRNA miRNA MGP_CBAJ_T0057158.1 MGP_CBAJ_G0026165.1 mouse_genomes_project 2 140106537 140143766 - MGP_CBAJ_P0057158 Mall protein_coding protein_coding MGP_CBAJ_T0056618.1 MGP_CBAJ_G0026057.1 mouse_genomes_project 2 131474429 131502252 - Pla2g4e protein_coding retained_intron MGP_CBAJ_T0056619.1 MGP_CBAJ_G0026057.1 mouse_genomes_project 2 131474429 131557842 - MGP_CBAJ_P0056619 Pla2g4e protein_coding protein_coding MGP_CBAJ_T0056620.1 MGP_CBAJ_G0026057.1 mouse_genomes_project 2 131480197 131557595 - Pla2g4e protein_coding retained_intron MGP_CBAJ_T0056621.1 MGP_CBAJ_G0026057.1 mouse_genomes_project 2 131500426 131557621 - Pla2g4e protein_coding processed_transcript MGP_CBAJ_T0056368.1 MGP_CBAJ_G0026002.1 mouse_genomes_project 2 126639072 126855539 - MGP_CBAJ_P0056368 Meis2 protein_coding protein_coding MGP_CBAJ_T0056369.1 MGP_CBAJ_G0026002.1 mouse_genomes_project 2 126639072 126856335 - MGP_CBAJ_P0056369 Meis2 protein_coding protein_coding MGP_CBAJ_T0056370.1 MGP_CBAJ_G0026002.1 mouse_genomes_project 2 126639072 126856335 - MGP_CBAJ_P0056370 Meis2 protein_coding protein_coding MGP_CBAJ_T0056371.1 MGP_CBAJ_G0026002.1 mouse_genomes_project 2 126639072 126855539 - MGP_CBAJ_P0056371 Meis2 protein_coding protein_coding MGP_CBAJ_T0056372.1 MGP_CBAJ_G0026002.1 mouse_genomes_project 2 126639153 126855213 - MGP_CBAJ_P0056372 Meis2 protein_coding protein_coding MGP_CBAJ_T0056373.1 MGP_CBAJ_G0026002.1 mouse_genomes_project 2 126639308 126855006 - MGP_CBAJ_P0056373 Meis2 protein_coding protein_coding MGP_CBAJ_T0056374.1 MGP_CBAJ_G0026002.1 mouse_genomes_project 2 126639912 126648952 - Meis2 protein_coding processed_transcript MGP_CBAJ_T0056375.1 MGP_CBAJ_G0026002.1 mouse_genomes_project 2 126640235 126644876 - Meis2 protein_coding retained_intron MGP_CBAJ_T0056376.1 MGP_CBAJ_G0026002.1 mouse_genomes_project 2 126640281 126828826 - Meis2 protein_coding processed_transcript MGP_CBAJ_T0056377.1 MGP_CBAJ_G0026002.1 mouse_genomes_project 2 126640326 126648863 - Meis2 protein_coding processed_transcript MGP_CBAJ_T0056378.1 MGP_CBAJ_G0026002.1 mouse_genomes_project 2 126640467 126648952 - Meis2 protein_coding processed_transcript MGP_CBAJ_T0056379.1 MGP_CBAJ_G0026002.1 mouse_genomes_project 2 126640878 126648971 - Meis2 protein_coding retained_intron MGP_CBAJ_T0056380.1 MGP_CBAJ_G0026002.1 mouse_genomes_project 2 126642884 126648955 - Meis2 protein_coding processed_transcript MGP_CBAJ_T0056381.1 MGP_CBAJ_G0026002.1 mouse_genomes_project 2 126702358 126836464 - Meis2 protein_coding processed_transcript MGP_CBAJ_T0056382.1 MGP_CBAJ_G0026002.1 mouse_genomes_project 2 126778080 126853011 - Meis2 protein_coding retained_intron MGP_CBAJ_T0056383.1 MGP_CBAJ_G0026002.1 mouse_genomes_project 2 126822930 126835996 - Meis2 protein_coding retained_intron MGP_CBAJ_T0056384.1 MGP_CBAJ_G0026002.1 mouse_genomes_project 2 126835867 126854072 - Meis2 protein_coding processed_transcript MGP_CBAJ_T0056385.1 MGP_CBAJ_G0026002.1 mouse_genomes_project 2 126835867 126853181 - Meis2 protein_coding processed_transcript MGP_CBAJ_T0056386.1 MGP_CBAJ_G0026002.1 mouse_genomes_project 2 126835890 126848470 - Meis2 protein_coding retained_intron MGP_CBAJ_T0054439.1 MGP_CBAJ_G0025450.1 mouse_genomes_project 2 56105271 56166947 - MGP_CBAJ_P0054439 Prpf40a protein_coding protein_coding MGP_CBAJ_T0054440.1 MGP_CBAJ_G0025450.1 mouse_genomes_project 2 56111620 56117766 - Prpf40a protein_coding processed_transcript MGP_CBAJ_T0054441.1 MGP_CBAJ_G0025450.1 mouse_genomes_project 2 56125548 56167006 - MGP_CBAJ_P0054441 Prpf40a protein_coding protein_coding MGP_CBAJ_T0054442.1 MGP_CBAJ_G0025450.1 mouse_genomes_project 2 56146568 56166926 - Prpf40a protein_coding processed_transcript MGP_CBAJ_T0054443.1 MGP_CBAJ_G0025450.1 mouse_genomes_project 2 56151885 56166947 - Prpf40a protein_coding processed_transcript MGP_CBAJ_T0017622.1 MGP_CBAJ_G0015217.1 mouse_genomes_project 2 144727515 144758986 - 5330413P13Rik processed_transcript processed_transcript MGP_CBAJ_T0017623.1 MGP_CBAJ_G0015217.1 mouse_genomes_project 2 144754951 144758991 - 5330413P13Rik processed_transcript processed_transcript MGP_CBAJ_T0017624.1 MGP_CBAJ_G0015217.1 mouse_genomes_project 2 144755168 144758954 - 5330413P13Rik processed_transcript processed_transcript MGP_CBAJ_T0007022.1 MGP_CBAJ_G0005757.1 mouse_genomes_project 2 1218847 1225055 + Gm13189 lincRNA lincRNA MGP_CBAJ_T0004079.1 MGP_CBAJ_G0003604.1 mouse_genomes_project 2 180215069 180216020 + 0610039K10Rik antisense antisense MGP_CBAJ_T0004080.1 MGP_CBAJ_G0003604.1 mouse_genomes_project 2 180215069 180216021 + 0610039K10Rik antisense antisense MGP_CBAJ_T0055863.1 MGP_CBAJ_G0025864.1 mouse_genomes_project 2 100406604 100413145 + Pex16 protein_coding processed_transcript MGP_CBAJ_T0055864.1 MGP_CBAJ_G0025864.1 mouse_genomes_project 2 100407234 100413146 + MGP_CBAJ_P0055864 Pex16 protein_coding protein_coding MGP_CBAJ_T0055865.1 MGP_CBAJ_G0025864.1 mouse_genomes_project 2 100407421 100411250 + Pex16 protein_coding processed_transcript MGP_CBAJ_T0055866.1 MGP_CBAJ_G0025864.1 mouse_genomes_project 2 100407487 100408632 + Pex16 protein_coding processed_transcript MGP_CBAJ_T0052354.1 MGP_CBAJ_G0025082.1 mouse_genomes_project 2 16773061 16773603 - MGP_CBAJ_P0052354 H2afb1 protein_coding protein_coding MGP_CBAJ_T0017528.1 MGP_CBAJ_G0015167.1 mouse_genomes_project 2 74833585 74837076 + Gm13631 processed_transcript processed_transcript MGP_CBAJ_T0013407.1 MGP_CBAJ_G0011519.1 mouse_genomes_project 2 73421452 73421842 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010249.1 MGP_CBAJ_G0008387.1 mouse_genomes_project 2 15607320 15607430 - Gm24933 miRNA miRNA MGP_CBAJ_T0017520.1 MGP_CBAJ_G0015161.1 mouse_genomes_project 2 60493890 60551065 - BB557941 processed_transcript processed_transcript MGP_CBAJ_T0017579.1 MGP_CBAJ_G0015199.1 mouse_genomes_project 2 124553612 124568053 + A530058N18Rik processed_transcript antisense MGP_CBAJ_T0017580.1 MGP_CBAJ_G0015199.1 mouse_genomes_project 2 124553720 124572304 + A530058N18Rik processed_transcript antisense MGP_CBAJ_T0017581.1 MGP_CBAJ_G0015199.1 mouse_genomes_project 2 124553721 124571594 + A530058N18Rik processed_transcript antisense MGP_CBAJ_T0017582.1 MGP_CBAJ_G0015199.1 mouse_genomes_project 2 124553723 124572117 + A530058N18Rik processed_transcript antisense MGP_CBAJ_T0017583.1 MGP_CBAJ_G0015199.1 mouse_genomes_project 2 124553736 124560678 + A530058N18Rik processed_transcript retained_intron MGP_CBAJ_T0017584.1 MGP_CBAJ_G0015199.1 mouse_genomes_project 2 124553754 124557520 + A530058N18Rik processed_transcript antisense MGP_CBAJ_T0017585.1 MGP_CBAJ_G0015199.1 mouse_genomes_project 2 124553755 124571462 + A530058N18Rik processed_transcript antisense MGP_CBAJ_T0013682.1 MGP_CBAJ_G0011794.1 mouse_genomes_project 2 184332545 184336047 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057015.1 MGP_CBAJ_G0026134.1 mouse_genomes_project 2 138001227 138002407 + Galk2 protein_coding processed_transcript MGP_CBAJ_T0057016.1 MGP_CBAJ_G0026134.1 mouse_genomes_project 2 138001252 138146631 + MGP_CBAJ_P0057016 Galk2 protein_coding protein_coding MGP_CBAJ_T0057017.1 MGP_CBAJ_G0026134.1 mouse_genomes_project 2 138001266 138043404 + MGP_CBAJ_P0057017 Galk2 protein_coding protein_coding MGP_CBAJ_T0057018.1 MGP_CBAJ_G0026134.1 mouse_genomes_project 2 138008176 138081228 + MGP_CBAJ_P0057018 Galk2 protein_coding protein_coding MGP_CBAJ_T0057019.1 MGP_CBAJ_G0026134.1 mouse_genomes_project 2 138008176 138145919 + MGP_CBAJ_P0057019 Galk2 protein_coding protein_coding MGP_CBAJ_T0057020.1 MGP_CBAJ_G0026134.1 mouse_genomes_project 2 138008314 138062788 + Galk2 protein_coding processed_transcript MGP_CBAJ_T0057021.1 MGP_CBAJ_G0026134.1 mouse_genomes_project 2 138008321 138046628 + MGP_CBAJ_P0057021 Galk2 protein_coding protein_coding MGP_CBAJ_T0057022.1 MGP_CBAJ_G0026134.1 mouse_genomes_project 2 138008325 138081284 + MGP_CBAJ_P0057022 Galk2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057023.1 MGP_CBAJ_G0026134.1 mouse_genomes_project 2 138008339 138103845 + Galk2 protein_coding retained_intron MGP_CBAJ_T0053366.1 MGP_CBAJ_G0025263.1 mouse_genomes_project 2 30185650 30204597 + MGP_CBAJ_P0053366 protein_coding unknown_likely_coding MGP_CBAJ_T0053369.1 MGP_CBAJ_G0025263.1 mouse_genomes_project 2 30199636 30204379 + MGP_CBAJ_P0053369 protein_coding protein_coding MGP_CBAJ_T0010267.1 MGP_CBAJ_G0008405.1 mouse_genomes_project 2 29927392 29927457 + Mir219b miRNA miRNA MGP_CBAJ_T0059093.1 MGP_CBAJ_G0026621.1 mouse_genomes_project 2 185759793 185784052 - MGP_CBAJ_P0059093 Kcng1 protein_coding protein_coding MGP_CBAJ_T0059094.1 MGP_CBAJ_G0026621.1 mouse_genomes_project 2 185761374 185772270 - MGP_CBAJ_P0059094 Kcng1 protein_coding protein_coding MGP_CBAJ_T0059095.1 MGP_CBAJ_G0026621.1 mouse_genomes_project 2 185772037 185784603 - MGP_CBAJ_P0059095 Kcng1 protein_coding protein_coding MGP_CBAJ_T0058984.1 MGP_CBAJ_G0026598.1 mouse_genomes_project 2 184003706 184113358 + MGP_CBAJ_P0058984 Arfgef2 protein_coding protein_coding MGP_CBAJ_T0058985.1 MGP_CBAJ_G0026598.1 mouse_genomes_project 2 184022993 184054205 + MGP_CBAJ_P0058985 Arfgef2 protein_coding protein_coding MGP_CBAJ_T0056735.1 MGP_CBAJ_G0026073.1 mouse_genomes_project 2 132409848 132416544 + MGP_CBAJ_P0056735 Ccndbp1 protein_coding protein_coding MGP_CBAJ_T0056736.1 MGP_CBAJ_G0026073.1 mouse_genomes_project 2 132409883 132414360 + Ccndbp1 protein_coding processed_transcript MGP_CBAJ_T0056737.1 MGP_CBAJ_G0026073.1 mouse_genomes_project 2 132409888 132417921 + MGP_CBAJ_P0056737 Ccndbp1 protein_coding protein_coding MGP_CBAJ_T0056738.1 MGP_CBAJ_G0026073.1 mouse_genomes_project 2 132409926 132418305 + MGP_CBAJ_P0056738 Ccndbp1 protein_coding protein_coding MGP_CBAJ_T0056739.1 MGP_CBAJ_G0026073.1 mouse_genomes_project 2 132410120 132411991 + Ccndbp1 protein_coding retained_intron MGP_CBAJ_T0056740.1 MGP_CBAJ_G0026073.1 mouse_genomes_project 2 132412466 132413168 + Ccndbp1 protein_coding retained_intron MGP_CBAJ_T0056741.1 MGP_CBAJ_G0026073.1 mouse_genomes_project 2 132413902 132414372 + Ccndbp1 protein_coding processed_transcript MGP_CBAJ_T0055438.1 MGP_CBAJ_G0025713.1 mouse_genomes_project 2 94390745 94391690 + MGP_CBAJ_P0055438 Olfr1121 protein_coding protein_coding MGP_CBAJ_T0007087.1 MGP_CBAJ_G0005805.1 mouse_genomes_project 2 39643699 39682642 + Gm13589 lincRNA lincRNA MGP_CBAJ_T0003823.1 MGP_CBAJ_G0003418.1 mouse_genomes_project 2 9548045 9556675 + Gm10851 antisense antisense MGP_CBAJ_T0004092.1 MGP_CBAJ_G0003612.1 mouse_genomes_project 2 182890489 182892510 + Gm11465 antisense antisense MGP_CBAJ_T0007072.1 MGP_CBAJ_G0005794.1 mouse_genomes_project 2 33143230 33151875 + lincRNA lincRNA MGP_CBAJ_T0055584.1 MGP_CBAJ_G0025827.1 mouse_genomes_project 2 98007631 98010604 + MGP_CBAJ_P0055584 protein_coding protein_coding MGP_CBAJ_T0057556.1 MGP_CBAJ_G0026255.1 mouse_genomes_project 2 149389931 149397216 + MGP_CBAJ_P0057556 Lamp5 protein_coding protein_coding MGP_CBAJ_T0057557.1 MGP_CBAJ_G0026255.1 mouse_genomes_project 2 149395611 149407550 + MGP_CBAJ_P0057557 Lamp5 protein_coding protein_coding MGP_CBAJ_T0057558.1 MGP_CBAJ_G0026255.1 mouse_genomes_project 2 149395936 149399179 + Lamp5 protein_coding retained_intron MGP_CBAJ_T0057559.1 MGP_CBAJ_G0026255.1 mouse_genomes_project 2 149395936 149396898 + Lamp5 protein_coding processed_transcript MGP_CBAJ_T0057560.1 MGP_CBAJ_G0026255.1 mouse_genomes_project 2 149397115 149407538 + Lamp5 protein_coding processed_transcript MGP_CBAJ_T0013249.1 MGP_CBAJ_G0011361.1 mouse_genomes_project 2 13106938 13108044 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0051979.1 MGP_CBAJ_G0025024.1 mouse_genomes_project 2 644181 828578 + MGP_CBAJ_P0051979 Fam107b protein_coding protein_coding MGP_CBAJ_T0051980.1 MGP_CBAJ_G0025024.1 mouse_genomes_project 2 756955 830933 + MGP_CBAJ_P0051980 Fam107b protein_coding protein_coding MGP_CBAJ_T0051981.1 MGP_CBAJ_G0025024.1 mouse_genomes_project 2 756975 828712 + MGP_CBAJ_P0051981 Fam107b protein_coding nonsense_mediated_decay MGP_CBAJ_T0051982.1 MGP_CBAJ_G0025024.1 mouse_genomes_project 2 819502 821766 + MGP_CBAJ_P0051982 Fam107b protein_coding protein_coding MGP_CBAJ_T0051983.1 MGP_CBAJ_G0025024.1 mouse_genomes_project 2 819528 830931 + MGP_CBAJ_P0051983 Fam107b protein_coding protein_coding MGP_CBAJ_T0051984.1 MGP_CBAJ_G0025024.1 mouse_genomes_project 2 822740 828416 + MGP_CBAJ_P0051984 Fam107b protein_coding protein_coding MGP_CBAJ_T0013690.1 MGP_CBAJ_G0011802.1 mouse_genomes_project 2 190231889 190232504 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0059065.1 MGP_CBAJ_G0026614.1 mouse_genomes_project 2 185370314 185414815 + Ptpn1 protein_coding processed_transcript MGP_CBAJ_T0059066.1 MGP_CBAJ_G0026614.1 mouse_genomes_project 2 185370584 185419463 + MGP_CBAJ_P0059066 Ptpn1 protein_coding protein_coding MGP_CBAJ_T0059067.1 MGP_CBAJ_G0026614.1 mouse_genomes_project 2 185370629 185407863 + Ptpn1 protein_coding processed_transcript MGP_CBAJ_T0059068.1 MGP_CBAJ_G0026614.1 mouse_genomes_project 2 185370629 185419463 + Ptpn1 protein_coding processed_transcript MGP_CBAJ_T0059069.1 MGP_CBAJ_G0026614.1 mouse_genomes_project 2 185370652 185403765 + Ptpn1 protein_coding processed_transcript MGP_CBAJ_T0059070.1 MGP_CBAJ_G0026614.1 mouse_genomes_project 2 185370652 185407811 + Ptpn1 protein_coding processed_transcript MGP_CBAJ_T0059071.1 MGP_CBAJ_G0026614.1 mouse_genomes_project 2 185389310 185405145 + Ptpn1 protein_coding processed_transcript MGP_CBAJ_T0053167.1 MGP_CBAJ_G0025231.1 mouse_genomes_project 2 28035052 28058955 + Olfm1 protein_coding processed_transcript MGP_CBAJ_T0053168.1 MGP_CBAJ_G0025231.1 mouse_genomes_project 2 28035052 28074898 + MGP_CBAJ_P0053168 Olfm1 protein_coding protein_coding MGP_CBAJ_T0053169.1 MGP_CBAJ_G0025231.1 mouse_genomes_project 2 28035153 28075172 + MGP_CBAJ_P0053169 Olfm1 protein_coding protein_coding MGP_CBAJ_T0053170.1 MGP_CBAJ_G0025231.1 mouse_genomes_project 2 28047619 28058955 + MGP_CBAJ_P0053170 Olfm1 protein_coding protein_coding MGP_CBAJ_T0053171.1 MGP_CBAJ_G0025231.1 mouse_genomes_project 2 28047619 28075172 + MGP_CBAJ_P0053171 Olfm1 protein_coding protein_coding MGP_CBAJ_T0004047.1 MGP_CBAJ_G0003577.1 mouse_genomes_project 2 166459119 166460737 - Gm14167 antisense antisense MGP_CBAJ_T0057906.1 MGP_CBAJ_G0026349.1 mouse_genomes_project 2 167232286 167293511 + MGP_CBAJ_P0057906 Csnk2a1 protein_coding protein_coding MGP_CBAJ_T0057907.1 MGP_CBAJ_G0026349.1 mouse_genomes_project 2 167232323 167284995 + Csnk2a1 protein_coding retained_intron MGP_CBAJ_T0057908.1 MGP_CBAJ_G0026349.1 mouse_genomes_project 2 167232343 167272477 + MGP_CBAJ_P0057908 Csnk2a1 protein_coding protein_coding MGP_CBAJ_T0057909.1 MGP_CBAJ_G0026349.1 mouse_genomes_project 2 167232355 167269044 + MGP_CBAJ_P0057909 Csnk2a1 protein_coding protein_coding MGP_CBAJ_T0057910.1 MGP_CBAJ_G0026349.1 mouse_genomes_project 2 167232360 167264480 + Csnk2a1 protein_coding retained_intron MGP_CBAJ_T0056742.1 MGP_CBAJ_G0026074.1 mouse_genomes_project 2 132420747 132440146 - MGP_CBAJ_P0056742 Epb42 protein_coding protein_coding MGP_CBAJ_T0056743.1 MGP_CBAJ_G0026074.1 mouse_genomes_project 2 132421075 132430339 - Epb42 protein_coding processed_transcript MGP_CBAJ_T0056744.1 MGP_CBAJ_G0026074.1 mouse_genomes_project 2 132421075 132425660 - Epb42 protein_coding processed_transcript MGP_CBAJ_T0056745.1 MGP_CBAJ_G0026074.1 mouse_genomes_project 2 132422260 132424870 - Epb42 protein_coding retained_intron MGP_CBAJ_T0056746.1 MGP_CBAJ_G0026074.1 mouse_genomes_project 2 132426502 132439909 - MGP_CBAJ_P0056746 Epb42 protein_coding protein_coding MGP_CBAJ_T0056747.1 MGP_CBAJ_G0026074.1 mouse_genomes_project 2 132430785 132439755 - Epb42 protein_coding processed_transcript MGP_CBAJ_T0056748.1 MGP_CBAJ_G0026074.1 mouse_genomes_project 2 132436476 132439819 - Epb42 protein_coding processed_transcript MGP_CBAJ_T0099110.1 MGP_CBAJ_G0037365.1 mouse_genomes_project 2 79991253 79991360 + Gm22975 snRNA snRNA MGP_CBAJ_T0057073.1 MGP_CBAJ_G0026145.1 mouse_genomes_project 2 139194106 139243679 - MGP_CBAJ_P0057073 Sppl2a protein_coding unknown_likely_coding MGP_CBAJ_T0057074.1 MGP_CBAJ_G0026145.1 mouse_genomes_project 2 139194108 139243902 - MGP_CBAJ_P0057074 Sppl2a protein_coding protein_coding MGP_CBAJ_T0057075.1 MGP_CBAJ_G0026145.1 mouse_genomes_project 2 139197964 139227048 - MGP_CBAJ_P0057075 Sppl2a protein_coding protein_coding MGP_CBAJ_T0057076.1 MGP_CBAJ_G0026145.1 mouse_genomes_project 2 139221567 139232839 - Sppl2a protein_coding retained_intron MGP_CBAJ_T0004040.1 MGP_CBAJ_G0003570.1 mouse_genomes_project 2 158344313 158345922 + 4930444E06Rik antisense antisense MGP_CBAJ_T0053282.1 MGP_CBAJ_G0025253.1 mouse_genomes_project 2 29823279 29827407 + Gm13547 protein_coding processed_transcript MGP_CBAJ_T0053284.1 MGP_CBAJ_G0025253.1 mouse_genomes_project 2 29825495 29828271 + MGP_CBAJ_P0053284 Gm13547 protein_coding protein_coding MGP_CBAJ_T0053285.1 MGP_CBAJ_G0025253.1 mouse_genomes_project 2 29825528 29828149 + MGP_CBAJ_P0053285 Gm13547 protein_coding protein_coding MGP_CBAJ_T0058780.1 MGP_CBAJ_G0026551.1 mouse_genomes_project 2 181292561 181293698 + Wfdc2 protein_coding processed_transcript MGP_CBAJ_T0058781.1 MGP_CBAJ_G0026551.1 mouse_genomes_project 2 181292727 181298656 + MGP_CBAJ_P0058781 Wfdc2 protein_coding protein_coding MGP_CBAJ_T0058782.1 MGP_CBAJ_G0026551.1 mouse_genomes_project 2 181292847 181298656 + MGP_CBAJ_P0058782 Wfdc2 protein_coding protein_coding MGP_CBAJ_T0058783.1 MGP_CBAJ_G0026551.1 mouse_genomes_project 2 181292862 181298656 + MGP_CBAJ_P0058783 Wfdc2 protein_coding protein_coding MGP_CBAJ_T0058784.1 MGP_CBAJ_G0026551.1 mouse_genomes_project 2 181293167 181294331 + MGP_CBAJ_P0058784 Wfdc2 protein_coding protein_coding MGP_CBAJ_T0057684.1 MGP_CBAJ_G0026287.1 mouse_genomes_project 2 158684986 158693770 - MGP_CBAJ_P0057684 Rbbp9 protein_coding protein_coding MGP_CBAJ_T0057685.1 MGP_CBAJ_G0026287.1 mouse_genomes_project 2 158686542 158693691 - Rbbp9 protein_coding processed_transcript MGP_CBAJ_T0013287.1 MGP_CBAJ_G0011399.1 mouse_genomes_project 2 23817643 23818587 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013369.1 MGP_CBAJ_G0011481.1 mouse_genomes_project 2 59011868 59013124 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0054856.1 MGP_CBAJ_G0025528.1 mouse_genomes_project 2 75595876 75718109 - Tlk1 protein_coding processed_transcript MGP_CBAJ_T0054857.1 MGP_CBAJ_G0025528.1 mouse_genomes_project 2 75595876 75718440 - MGP_CBAJ_P0054857 Tlk1 protein_coding protein_coding MGP_CBAJ_T0054858.1 MGP_CBAJ_G0025528.1 mouse_genomes_project 2 75597610 75601694 - Tlk1 protein_coding processed_transcript MGP_CBAJ_T0054859.1 MGP_CBAJ_G0025528.1 mouse_genomes_project 2 75599781 75601374 - Tlk1 protein_coding processed_transcript MGP_CBAJ_T0054860.1 MGP_CBAJ_G0025528.1 mouse_genomes_project 2 75631992 75718035 - Tlk1 protein_coding processed_transcript MGP_CBAJ_T0054861.1 MGP_CBAJ_G0025528.1 mouse_genomes_project 2 75635226 75718023 - Tlk1 protein_coding processed_transcript MGP_CBAJ_T0054862.1 MGP_CBAJ_G0025528.1 mouse_genomes_project 2 75636977 75717940 - Tlk1 protein_coding processed_transcript MGP_CBAJ_T0007119.1 MGP_CBAJ_G0005834.1 mouse_genomes_project 2 76769575 76777158 + Gm13647 lincRNA lincRNA MGP_CBAJ_T0013530.1 MGP_CBAJ_G0011642.1 mouse_genomes_project 2 116719384 116719882 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010334.1 MGP_CBAJ_G0008472.1 mouse_genomes_project 2 143240978 143241041 - Gm23876 miRNA miRNA MGP_CBAJ_T0057063.1 MGP_CBAJ_G0026144.1 mouse_genomes_project 2 139082972 139176175 - MGP_CBAJ_P0057063 Trpm7 protein_coding protein_coding MGP_CBAJ_T0057064.1 MGP_CBAJ_G0026144.1 mouse_genomes_project 2 139082997 139086954 - Trpm7 protein_coding retained_intron MGP_CBAJ_T0057065.1 MGP_CBAJ_G0026144.1 mouse_genomes_project 2 139084242 139094020 - Trpm7 protein_coding retained_intron MGP_CBAJ_T0057066.1 MGP_CBAJ_G0026144.1 mouse_genomes_project 2 139084313 139089242 - MGP_CBAJ_P0057066 Trpm7 protein_coding protein_coding MGP_CBAJ_T0057067.1 MGP_CBAJ_G0026144.1 mouse_genomes_project 2 139088393 139089225 - Trpm7 protein_coding retained_intron MGP_CBAJ_T0057068.1 MGP_CBAJ_G0026144.1 mouse_genomes_project 2 139088678 139096466 - Trpm7 protein_coding processed_transcript MGP_CBAJ_T0057069.1 MGP_CBAJ_G0026144.1 mouse_genomes_project 2 139108168 139114969 - Trpm7 protein_coding retained_intron MGP_CBAJ_T0057070.1 MGP_CBAJ_G0026144.1 mouse_genomes_project 2 139126715 139131327 - Trpm7 protein_coding retained_intron MGP_CBAJ_T0057071.1 MGP_CBAJ_G0026144.1 mouse_genomes_project 2 139128294 139176385 - Trpm7 protein_coding retained_intron MGP_CBAJ_T0057072.1 MGP_CBAJ_G0026144.1 mouse_genomes_project 2 139128297 139131666 - Trpm7 protein_coding retained_intron MGP_CBAJ_T0053711.1 MGP_CBAJ_G0025314.1 mouse_genomes_project 2 32889880 32939437 - MGP_CBAJ_P0053711 Dnm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053712.1 MGP_CBAJ_G0025314.1 mouse_genomes_project 2 32889880 32939438 - MGP_CBAJ_P0053712 Dnm1 protein_coding protein_coding MGP_CBAJ_T0053713.1 MGP_CBAJ_G0025314.1 mouse_genomes_project 2 32889880 32939444 - MGP_CBAJ_P0053713 Dnm1 protein_coding protein_coding MGP_CBAJ_T0053714.1 MGP_CBAJ_G0025314.1 mouse_genomes_project 2 32889880 32939492 - MGP_CBAJ_P0053714 Dnm1 protein_coding protein_coding MGP_CBAJ_T0053715.1 MGP_CBAJ_G0025314.1 mouse_genomes_project 2 32889880 32939456 - MGP_CBAJ_P0053715 Dnm1 protein_coding protein_coding MGP_CBAJ_T0053716.1 MGP_CBAJ_G0025314.1 mouse_genomes_project 2 32889880 32939417 - MGP_CBAJ_P0053716 Dnm1 protein_coding protein_coding MGP_CBAJ_T0053717.1 MGP_CBAJ_G0025314.1 mouse_genomes_project 2 32889887 32939388 - MGP_CBAJ_P0053717 Dnm1 protein_coding protein_coding MGP_CBAJ_T0053718.1 MGP_CBAJ_G0025314.1 mouse_genomes_project 2 32889906 32904719 - MGP_CBAJ_P0053718 Dnm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053719.1 MGP_CBAJ_G0025314.1 mouse_genomes_project 2 32890250 32939424 - MGP_CBAJ_P0053719 Dnm1 protein_coding protein_coding MGP_CBAJ_T0053720.1 MGP_CBAJ_G0025314.1 mouse_genomes_project 2 32890333 32892045 - Dnm1 protein_coding retained_intron MGP_CBAJ_T0053721.1 MGP_CBAJ_G0025314.1 mouse_genomes_project 2 32890884 32894333 - MGP_CBAJ_P0053721 Dnm1 protein_coding protein_coding MGP_CBAJ_T0053722.1 MGP_CBAJ_G0025314.1 mouse_genomes_project 2 32890888 32939456 - MGP_CBAJ_P0053722 Dnm1 protein_coding protein_coding MGP_CBAJ_T0053723.1 MGP_CBAJ_G0025314.1 mouse_genomes_project 2 32891259 32894303 - MGP_CBAJ_P0053723 Dnm1 protein_coding protein_coding MGP_CBAJ_T0053724.1 MGP_CBAJ_G0025314.1 mouse_genomes_project 2 32891672 32894299 - MGP_CBAJ_P0053724 Dnm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053725.1 MGP_CBAJ_G0025314.1 mouse_genomes_project 2 32893636 32901463 - Dnm1 protein_coding processed_transcript MGP_CBAJ_T0053726.1 MGP_CBAJ_G0025314.1 mouse_genomes_project 2 32893651 32894487 - Dnm1 protein_coding retained_intron MGP_CBAJ_T0053727.1 MGP_CBAJ_G0025314.1 mouse_genomes_project 2 32923965 32939405 - MGP_CBAJ_P0053727 Dnm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054329.1 MGP_CBAJ_G0025432.1 mouse_genomes_project 2 51388429 51436601 - MGP_CBAJ_P0054329 Orc4 protein_coding protein_coding MGP_CBAJ_T0054330.1 MGP_CBAJ_G0025432.1 mouse_genomes_project 2 51390485 51395083 - Orc4 protein_coding processed_transcript MGP_CBAJ_T0054331.1 MGP_CBAJ_G0025432.1 mouse_genomes_project 2 51390921 51436556 - Orc4 protein_coding processed_transcript MGP_CBAJ_T0054332.1 MGP_CBAJ_G0025432.1 mouse_genomes_project 2 51390984 51395738 - Orc4 protein_coding processed_transcript MGP_CBAJ_T0054333.1 MGP_CBAJ_G0025432.1 mouse_genomes_project 2 51391019 51397645 - Orc4 protein_coding processed_transcript MGP_CBAJ_T0054334.1 MGP_CBAJ_G0025432.1 mouse_genomes_project 2 51396473 51436559 - Orc4 protein_coding processed_transcript MGP_CBAJ_T0054335.1 MGP_CBAJ_G0025432.1 mouse_genomes_project 2 51402274 51437364 - MGP_CBAJ_P0054335 Orc4 protein_coding protein_coding MGP_CBAJ_T0054336.1 MGP_CBAJ_G0025432.1 mouse_genomes_project 2 51416725 51427691 - Orc4 protein_coding processed_transcript MGP_CBAJ_T0054337.1 MGP_CBAJ_G0025432.1 mouse_genomes_project 2 51419057 51436559 - MGP_CBAJ_P0054337 Orc4 protein_coding protein_coding MGP_CBAJ_T0054338.1 MGP_CBAJ_G0025432.1 mouse_genomes_project 2 51423523 51436557 - Orc4 protein_coding processed_transcript MGP_CBAJ_T0054339.1 MGP_CBAJ_G0025432.1 mouse_genomes_project 2 51423819 51436566 - MGP_CBAJ_P0054339 Orc4 protein_coding protein_coding MGP_CBAJ_T0054340.1 MGP_CBAJ_G0025432.1 mouse_genomes_project 2 51423890 51437596 - MGP_CBAJ_P0054340 Orc4 protein_coding protein_coding MGP_CBAJ_T0055805.1 MGP_CBAJ_G0025857.1 mouse_genomes_project 2 99878926 99880366 + MGP_CBAJ_P0055805 Chrm4 protein_coding protein_coding MGP_CBAJ_T0013251.1 MGP_CBAJ_G0011363.1 mouse_genomes_project 2 13130662 13131041 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0054208.1 MGP_CBAJ_G0025414.1 mouse_genomes_project 2 39741322 39824417 + MGP_CBAJ_P0054208 Nek6 protein_coding protein_coding MGP_CBAJ_T0054209.1 MGP_CBAJ_G0025414.1 mouse_genomes_project 2 39741347 39817287 + MGP_CBAJ_P0054209 Nek6 protein_coding protein_coding MGP_CBAJ_T0054210.1 MGP_CBAJ_G0025414.1 mouse_genomes_project 2 39741493 39815578 + MGP_CBAJ_P0054210 Nek6 protein_coding protein_coding MGP_CBAJ_T0054211.1 MGP_CBAJ_G0025414.1 mouse_genomes_project 2 39744260 39789988 + MGP_CBAJ_P0054211 Nek6 protein_coding protein_coding MGP_CBAJ_T0054212.1 MGP_CBAJ_G0025414.1 mouse_genomes_project 2 39744305 39793068 + MGP_CBAJ_P0054212 Nek6 protein_coding protein_coding MGP_CBAJ_T0058230.1 MGP_CBAJ_G0026437.1 mouse_genomes_project 2 171302278 171306586 + MGP_CBAJ_P0058230 Procr protein_coding protein_coding MGP_CBAJ_T0058231.1 MGP_CBAJ_G0026437.1 mouse_genomes_project 2 171302284 171305444 + MGP_CBAJ_P0058231 Procr protein_coding protein_coding MGP_CBAJ_T0058232.1 MGP_CBAJ_G0026437.1 mouse_genomes_project 2 171302311 171304911 + Procr protein_coding retained_intron MGP_CBAJ_T0058233.1 MGP_CBAJ_G0026437.1 mouse_genomes_project 2 171302504 171306583 + Procr protein_coding processed_transcript MGP_CBAJ_T0057801.1 MGP_CBAJ_G0026322.1 mouse_genomes_project 2 164512045 164512735 - MGP_CBAJ_P0057801 C530025M09Rik protein_coding protein_coding MGP_CBAJ_T0013544.1 MGP_CBAJ_G0011656.1 mouse_genomes_project 2 122223485 122225238 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013446.1 MGP_CBAJ_G0011558.1 mouse_genomes_project 2 86616196 86616804 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0054167.1 MGP_CBAJ_G0025408.1 mouse_genomes_project 2 38571147 38627156 + MGP_CBAJ_P0054167 Rabgap1 protein_coding protein_coding MGP_CBAJ_T0054168.1 MGP_CBAJ_G0025408.1 mouse_genomes_project 2 38571153 38701070 + MGP_CBAJ_P0054168 Rabgap1 protein_coding protein_coding MGP_CBAJ_T0054169.1 MGP_CBAJ_G0025408.1 mouse_genomes_project 2 38571164 38619902 + Rabgap1 protein_coding retained_intron MGP_CBAJ_T0054170.1 MGP_CBAJ_G0025408.1 mouse_genomes_project 2 38579502 38581655 + Rabgap1 protein_coding processed_transcript MGP_CBAJ_T0054171.1 MGP_CBAJ_G0025408.1 mouse_genomes_project 2 38580111 38607100 + MGP_CBAJ_P0054171 Rabgap1 protein_coding protein_coding MGP_CBAJ_T0054172.1 MGP_CBAJ_G0025408.1 mouse_genomes_project 2 38580111 38679581 + MGP_CBAJ_P0054172 Rabgap1 protein_coding protein_coding MGP_CBAJ_T0054173.1 MGP_CBAJ_G0025408.1 mouse_genomes_project 2 38580133 38701087 + MGP_CBAJ_P0054173 Rabgap1 protein_coding protein_coding MGP_CBAJ_T0054175.1 MGP_CBAJ_G0025408.1 mouse_genomes_project 2 38622416 38625513 + Rabgap1 protein_coding retained_intron MGP_CBAJ_T0054176.1 MGP_CBAJ_G0025408.1 mouse_genomes_project 2 38623497 38640441 + Rabgap1 protein_coding processed_transcript MGP_CBAJ_T0054178.1 MGP_CBAJ_G0025408.1 mouse_genomes_project 2 38651140 38699686 + Rabgap1 protein_coding processed_transcript MGP_CBAJ_T0007284.1 MGP_CBAJ_G0005966.1 mouse_genomes_project 2 179653818 179682654 + Gm11454 lincRNA lincRNA MGP_CBAJ_T0054147.1 MGP_CBAJ_G0025401.1 mouse_genomes_project 2 38310271 38310863 + MGP_CBAJ_P0054147 protein_coding protein_coding MGP_CBAJ_T0000996.1 MGP_CBAJ_G0000928.1 mouse_genomes_project 2 9377525 9378646 - TEC TEC MGP_CBAJ_T0053076.1 MGP_CBAJ_G0025213.1 mouse_genomes_project 2 26621722 26625539 + MGP_CBAJ_P0053076 Surf2 protein_coding protein_coding MGP_CBAJ_T0053077.1 MGP_CBAJ_G0025213.1 mouse_genomes_project 2 26621736 26625528 + Surf2 protein_coding processed_transcript MGP_CBAJ_T0053078.1 MGP_CBAJ_G0025213.1 mouse_genomes_project 2 26622024 26625177 + Surf2 protein_coding processed_transcript MGP_CBAJ_T0053079.1 MGP_CBAJ_G0025213.1 mouse_genomes_project 2 26622024 26625522 + Surf2 protein_coding retained_intron MGP_CBAJ_T0053080.1 MGP_CBAJ_G0025213.1 mouse_genomes_project 2 26622168 26625309 + Surf2 protein_coding processed_transcript MGP_CBAJ_T0053081.1 MGP_CBAJ_G0025213.1 mouse_genomes_project 2 26622783 26625191 + Surf2 protein_coding processed_transcript MGP_CBAJ_T0052539.1 MGP_CBAJ_G0025119.1 mouse_genomes_project 2 23600953 23603651 + MGP_CBAJ_P0052539 Il1f10 protein_coding protein_coding MGP_CBAJ_T0055397.1 MGP_CBAJ_G0025673.1 mouse_genomes_project 2 92957695 92958622 - MGP_CBAJ_P0055397 Olfr1049 protein_coding protein_coding MGP_CBAJ_T0053206.1 MGP_CBAJ_G0025240.1 mouse_genomes_project 2 28507435 28519949 - MGP_CBAJ_P0053206 Gfi1b protein_coding protein_coding MGP_CBAJ_T0053207.1 MGP_CBAJ_G0025240.1 mouse_genomes_project 2 28507440 28519912 - MGP_CBAJ_P0053207 Gfi1b protein_coding protein_coding MGP_CBAJ_T0053208.1 MGP_CBAJ_G0025240.1 mouse_genomes_project 2 28512756 28513378 - Gfi1b protein_coding processed_transcript MGP_CBAJ_T0053209.1 MGP_CBAJ_G0025240.1 mouse_genomes_project 2 28512763 28519949 - Gfi1b protein_coding processed_transcript MGP_CBAJ_T0099092.1 MGP_CBAJ_G0037347.1 mouse_genomes_project 2 24440843 24440947 - Gm24875 snRNA snRNA MGP_CBAJ_T0057163.1 MGP_CBAJ_G0026167.1 mouse_genomes_project 2 140209812 140210914 - MGP_CBAJ_P0057163 1500011K16Rik protein_coding protein_coding MGP_CBAJ_T0053197.1 MGP_CBAJ_G0025238.1 mouse_genomes_project 2 28447621 28455180 - MGP_CBAJ_P0053197 Cel protein_coding protein_coding MGP_CBAJ_T0053198.1 MGP_CBAJ_G0025238.1 mouse_genomes_project 2 28452343 28455221 - Cel protein_coding processed_transcript MGP_CBAJ_T0058272.1 MGP_CBAJ_G0026446.1 mouse_genomes_project 2 171557636 171597828 - MGP_CBAJ_P0058272 6430550D23Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0058277.1 MGP_CBAJ_G0026446.1 mouse_genomes_project 2 171590411 171594369 - MGP_CBAJ_P0058277 6430550D23Rik protein_coding protein_coding MGP_CBAJ_T0058278.1 MGP_CBAJ_G0026446.1 mouse_genomes_project 2 171590521 171597844 - 6430550D23Rik protein_coding retained_intron MGP_CBAJ_T0058279.1 MGP_CBAJ_G0026446.1 mouse_genomes_project 2 171592400 171597841 - MGP_CBAJ_P0058279 6430550D23Rik protein_coding protein_coding MGP_CBAJ_T0058280.1 MGP_CBAJ_G0026446.1 mouse_genomes_project 2 171593084 171597840 - MGP_CBAJ_P0058280 6430550D23Rik protein_coding protein_coding MGP_CBAJ_T0058281.1 MGP_CBAJ_G0026446.1 mouse_genomes_project 2 171593177 171597898 - MGP_CBAJ_P0058281 6430550D23Rik protein_coding protein_coding MGP_CBAJ_T0058282.1 MGP_CBAJ_G0026446.1 mouse_genomes_project 2 171593264 171594369 - MGP_CBAJ_P0058282 6430550D23Rik protein_coding protein_coding MGP_CBAJ_T0058283.1 MGP_CBAJ_G0026446.1 mouse_genomes_project 2 171593307 171594078 - MGP_CBAJ_P0058283 6430550D23Rik protein_coding protein_coding MGP_CBAJ_T0058284.1 MGP_CBAJ_G0026446.1 mouse_genomes_project 2 171593339 171594078 - MGP_CBAJ_P0058284 6430550D23Rik protein_coding protein_coding MGP_CBAJ_T0056281.1 MGP_CBAJ_G0025963.1 mouse_genomes_project 2 121786016 121786955 - MGP_CBAJ_P0056281 protein_coding protein_coding MGP_CBAJ_T0003924.1 MGP_CBAJ_G0003496.1 mouse_genomes_project 2 75366699 75372410 - Erich2os antisense antisense MGP_CBAJ_T0059057.1 MGP_CBAJ_G0026611.1 mouse_genomes_project 2 184979044 185006003 - MGP_CBAJ_P0059057 Ube2v1 protein_coding unknown_likely_coding MGP_CBAJ_T0059058.1 MGP_CBAJ_G0026611.1 mouse_genomes_project 2 184981256 185005958 - MGP_CBAJ_P0059058 Ube2v1 protein_coding protein_coding MGP_CBAJ_T0059059.1 MGP_CBAJ_G0026611.1 mouse_genomes_project 2 184988536 185005961 - Ube2v1 protein_coding retained_intron MGP_CBAJ_T0007172.1 MGP_CBAJ_G0005876.1 mouse_genomes_project 2 105476238 105581659 - 4930445B16Rik lincRNA lincRNA MGP_CBAJ_T0011372.1 MGP_CBAJ_G0009510.1 mouse_genomes_project 2 52465504 52465614 - Gm25223 misc_RNA misc_RNA MGP_CBAJ_T0007180.1 MGP_CBAJ_G0005882.1 mouse_genomes_project 2 112615832 112627194 - BC016548 lincRNA lincRNA MGP_CBAJ_T0007181.1 MGP_CBAJ_G0005882.1 mouse_genomes_project 2 112622146 112627192 - BC016548 lincRNA lincRNA MGP_CBAJ_T0055900.1 MGP_CBAJ_G0025874.1 mouse_genomes_project 2 101578626 101621552 - MGP_CBAJ_P0055900 Cd82 protein_coding protein_coding MGP_CBAJ_T0055901.1 MGP_CBAJ_G0025874.1 mouse_genomes_project 2 101578626 101621643 - MGP_CBAJ_P0055901 Cd82 protein_coding protein_coding MGP_CBAJ_T0055902.1 MGP_CBAJ_G0025874.1 mouse_genomes_project 2 101578631 101622087 - MGP_CBAJ_P0055902 Cd82 protein_coding protein_coding MGP_CBAJ_T0055903.1 MGP_CBAJ_G0025874.1 mouse_genomes_project 2 101578669 101579802 - Cd82 protein_coding processed_transcript MGP_CBAJ_T0055904.1 MGP_CBAJ_G0025874.1 mouse_genomes_project 2 101579344 101611817 - MGP_CBAJ_P0055904 Cd82 protein_coding protein_coding MGP_CBAJ_T0055905.1 MGP_CBAJ_G0025874.1 mouse_genomes_project 2 101580171 101621527 - MGP_CBAJ_P0055905 Cd82 protein_coding protein_coding MGP_CBAJ_T0055906.1 MGP_CBAJ_G0025874.1 mouse_genomes_project 2 101581341 101611821 - MGP_CBAJ_P0055906 Cd82 protein_coding protein_coding MGP_CBAJ_T0055907.1 MGP_CBAJ_G0025874.1 mouse_genomes_project 2 101581341 101621053 - MGP_CBAJ_P0055907 Cd82 protein_coding protein_coding MGP_CBAJ_T0055908.1 MGP_CBAJ_G0025874.1 mouse_genomes_project 2 101589263 101622281 - MGP_CBAJ_P0055908 Cd82 protein_coding protein_coding MGP_CBAJ_T0055909.1 MGP_CBAJ_G0025874.1 mouse_genomes_project 2 101592588 101621584 - Cd82 protein_coding processed_transcript MGP_CBAJ_T0055910.1 MGP_CBAJ_G0025874.1 mouse_genomes_project 2 101596492 101622053 - MGP_CBAJ_P0055910 Cd82 protein_coding protein_coding MGP_CBAJ_T0013628.1 MGP_CBAJ_G0011740.1 mouse_genomes_project 2 162973486 162973721 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100409.1 MGP_CBAJ_G0038664.1 mouse_genomes_project 2 166264199 166264335 - Gm23261 snoRNA snoRNA MGP_CBAJ_T0054006.1 MGP_CBAJ_G0025357.1 mouse_genomes_project 2 35812603 35832805 - MGP_CBAJ_P0054006 Phf19 protein_coding protein_coding MGP_CBAJ_T0054007.1 MGP_CBAJ_G0025357.1 mouse_genomes_project 2 35812630 35822993 - Phf19 protein_coding processed_transcript MGP_CBAJ_T0054008.1 MGP_CBAJ_G0025357.1 mouse_genomes_project 2 35816928 35823748 - Phf19 protein_coding processed_transcript MGP_CBAJ_T0054009.1 MGP_CBAJ_G0025357.1 mouse_genomes_project 2 35817815 35832855 - Phf19 protein_coding retained_intron MGP_CBAJ_T0054010.1 MGP_CBAJ_G0025357.1 mouse_genomes_project 2 35825926 35832846 - MGP_CBAJ_P0054010 Phf19 protein_coding protein_coding MGP_CBAJ_T0054030.1 MGP_CBAJ_G0025361.1 mouse_genomes_project 2 36039131 36060041 + MGP_CBAJ_P0054030 Cntrl protein_coding protein_coding MGP_CBAJ_T0054031.1 MGP_CBAJ_G0025361.1 mouse_genomes_project 2 36039131 36123649 + MGP_CBAJ_P0054031 Cntrl protein_coding protein_coding MGP_CBAJ_T0054032.1 MGP_CBAJ_G0025361.1 mouse_genomes_project 2 36039131 36124361 + MGP_CBAJ_P0054032 Cntrl protein_coding protein_coding MGP_CBAJ_T0054033.1 MGP_CBAJ_G0025361.1 mouse_genomes_project 2 36039248 36124359 + MGP_CBAJ_P0054033 Cntrl protein_coding unknown_likely_coding MGP_CBAJ_T0054034.1 MGP_CBAJ_G0025361.1 mouse_genomes_project 2 36039258 36123961 + MGP_CBAJ_P0054034 Cntrl protein_coding protein_coding MGP_CBAJ_T0054035.1 MGP_CBAJ_G0025361.1 mouse_genomes_project 2 36056752 36081718 + MGP_CBAJ_P0054035 Cntrl protein_coding protein_coding MGP_CBAJ_T0054036.1 MGP_CBAJ_G0025361.1 mouse_genomes_project 2 36061547 36124361 + MGP_CBAJ_P0054036 Cntrl protein_coding protein_coding MGP_CBAJ_T0054037.1 MGP_CBAJ_G0025361.1 mouse_genomes_project 2 36061547 36094683 + MGP_CBAJ_P0054037 Cntrl protein_coding protein_coding MGP_CBAJ_T0054038.1 MGP_CBAJ_G0025361.1 mouse_genomes_project 2 36061571 36070111 + MGP_CBAJ_P0054038 Cntrl protein_coding protein_coding MGP_CBAJ_T0054039.1 MGP_CBAJ_G0025361.1 mouse_genomes_project 2 36061571 36081718 + MGP_CBAJ_P0054039 Cntrl protein_coding protein_coding MGP_CBAJ_T0054040.1 MGP_CBAJ_G0025361.1 mouse_genomes_project 2 36079142 36081718 + MGP_CBAJ_P0054040 Cntrl protein_coding protein_coding MGP_CBAJ_T0054041.1 MGP_CBAJ_G0025361.1 mouse_genomes_project 2 36094354 36111338 + MGP_CBAJ_P0054041 Cntrl protein_coding nonsense_mediated_decay MGP_CBAJ_T0054042.1 MGP_CBAJ_G0025361.1 mouse_genomes_project 2 36107310 36111766 + Cntrl protein_coding retained_intron MGP_CBAJ_T0054043.1 MGP_CBAJ_G0025361.1 mouse_genomes_project 2 36120786 36124350 + Cntrl protein_coding retained_intron MGP_CBAJ_T0013648.1 MGP_CBAJ_G0011760.1 mouse_genomes_project 2 170978299 170982962 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101787.1 MGP_CBAJ_G0039818.1 mouse_genomes_project 2 40735348 40740610 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013258.1 MGP_CBAJ_G0011370.1 mouse_genomes_project 2 14501704 14502317 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0017571.1 MGP_CBAJ_G0015194.1 mouse_genomes_project 2 116325627 116326102 - BB218582 processed_transcript processed_transcript MGP_CBAJ_T0017572.1 MGP_CBAJ_G0015194.1 mouse_genomes_project 2 116325630 116333076 - BB218582 processed_transcript processed_transcript MGP_CBAJ_T0017573.1 MGP_CBAJ_G0015194.1 mouse_genomes_project 2 116329923 116333046 - BB218582 processed_transcript processed_transcript MGP_CBAJ_T0057738.1 MGP_CBAJ_G0026297.1 mouse_genomes_project 2 160445629 160448711 + MGP_CBAJ_P0057738 Insm1 protein_coding protein_coding MGP_CBAJ_T0057578.1 MGP_CBAJ_G0026260.1 mouse_genomes_project 2 150301160 150491992 + MGP_CBAJ_P0057578 Slx4ip protein_coding protein_coding MGP_CBAJ_T0057579.1 MGP_CBAJ_G0026260.1 mouse_genomes_project 2 150301443 150421314 + MGP_CBAJ_P0057579 Slx4ip protein_coding protein_coding MGP_CBAJ_T0057580.1 MGP_CBAJ_G0026260.1 mouse_genomes_project 2 150301550 150493645 + Slx4ip protein_coding processed_transcript MGP_CBAJ_T0057581.1 MGP_CBAJ_G0026260.1 mouse_genomes_project 2 150302110 150490615 + Slx4ip protein_coding processed_transcript MGP_CBAJ_T0057582.1 MGP_CBAJ_G0026260.1 mouse_genomes_project 2 150302110 150493645 + MGP_CBAJ_P0057582 Slx4ip protein_coding protein_coding MGP_CBAJ_T0057583.1 MGP_CBAJ_G0026260.1 mouse_genomes_project 2 150317652 150492121 + MGP_CBAJ_P0057583 Slx4ip protein_coding protein_coding MGP_CBAJ_T0007192.1 MGP_CBAJ_G0005893.1 mouse_genomes_project 2 125490024 125742085 + lincRNA lincRNA MGP_CBAJ_T0013299.1 MGP_CBAJ_G0011411.1 mouse_genomes_project 2 31230940 31231320 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0058621.1 MGP_CBAJ_G0026503.1 mouse_genomes_project 2 177187068 177192949 - MGP_CBAJ_P0058621 Emilin3 protein_coding protein_coding MGP_CBAJ_T0058622.1 MGP_CBAJ_G0026503.1 mouse_genomes_project 2 177187069 177192960 - MGP_CBAJ_P0058622 Emilin3 protein_coding protein_coding MGP_CBAJ_T0099129.1 MGP_CBAJ_G0037384.1 mouse_genomes_project 2 141918118 141918269 - Gm25703 snRNA snRNA MGP_CBAJ_T0001062.1 MGP_CBAJ_G0000993.1 mouse_genomes_project 2 141784684 141786627 - TEC TEC MGP_CBAJ_T0010236.1 MGP_CBAJ_G0008374.1 mouse_genomes_project 2 8389442 8389539 + Gm26092 miRNA miRNA MGP_CBAJ_T0098305.1 MGP_CBAJ_G0036572.1 mouse_genomes_project 2 1261717 1264277 + Gm37107 sense_intronic sense_intronic MGP_CBAJ_T0007187.1 MGP_CBAJ_G0005888.1 mouse_genomes_project 2 116247243 116253293 - Gm14014 lincRNA lincRNA MGP_CBAJ_T0003890.1 MGP_CBAJ_G0003470.1 mouse_genomes_project 2 39574990 39579391 - Gm13584 antisense antisense MGP_CBAJ_T0007078.1 MGP_CBAJ_G0005799.1 mouse_genomes_project 2 34835980 34934631 - C230014O12Rik lincRNA lincRNA MGP_CBAJ_T0007080.1 MGP_CBAJ_G0005799.1 mouse_genomes_project 2 34926945 34934637 - C230014O12Rik lincRNA lincRNA MGP_CBAJ_T0007328.1 MGP_CBAJ_G0006003.1 mouse_genomes_project 2 190459659 190462047 + Gm14275 lincRNA lincRNA MGP_CBAJ_T0013294.1 MGP_CBAJ_G0011406.1 mouse_genomes_project 2 26351246 26351941 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0054421.1 MGP_CBAJ_G0025447.1 mouse_genomes_project 2 55302685 55595250 - MGP_CBAJ_P0054421 Cacnb4 protein_coding protein_coding MGP_CBAJ_T0054422.1 MGP_CBAJ_G0025447.1 mouse_genomes_project 2 55302690 55455362 - MGP_CBAJ_P0054422 Cacnb4 protein_coding protein_coding MGP_CBAJ_T0054423.1 MGP_CBAJ_G0025447.1 mouse_genomes_project 2 55302690 55595479 - MGP_CBAJ_P0054423 Cacnb4 protein_coding protein_coding MGP_CBAJ_T0054424.1 MGP_CBAJ_G0025447.1 mouse_genomes_project 2 55302690 55455369 - MGP_CBAJ_P0054424 Cacnb4 protein_coding protein_coding MGP_CBAJ_T0054425.1 MGP_CBAJ_G0025447.1 mouse_genomes_project 2 55452985 55453508 - Cacnb4 protein_coding processed_transcript MGP_CBAJ_T0054426.1 MGP_CBAJ_G0025447.1 mouse_genomes_project 2 55594395 55594812 - Cacnb4 protein_coding processed_transcript MGP_CBAJ_T0054127.1 MGP_CBAJ_G0025383.1 mouse_genomes_project 2 37748624 37749554 + MGP_CBAJ_P0054127 Olfr346 protein_coding protein_coding MGP_CBAJ_T0007237.1 MGP_CBAJ_G0005928.1 mouse_genomes_project 2 150627964 150628714 + Gm28214 lincRNA lincRNA MGP_CBAJ_T0007148.1 MGP_CBAJ_G0005857.1 mouse_genomes_project 2 83982921 84046774 + Gm14461 lincRNA lincRNA MGP_CBAJ_T0007149.1 MGP_CBAJ_G0005857.1 mouse_genomes_project 2 84046235 84046544 + Gm14461 lincRNA lincRNA MGP_CBAJ_T0054608.1 MGP_CBAJ_G0025479.1 mouse_genomes_project 2 65685989 65687614 + Tbr1 protein_coding processed_transcript MGP_CBAJ_T0054609.1 MGP_CBAJ_G0025479.1 mouse_genomes_project 2 65687508 65699428 + MGP_CBAJ_P0054609 Tbr1 protein_coding protein_coding MGP_CBAJ_T0054610.1 MGP_CBAJ_G0025479.1 mouse_genomes_project 2 65689317 65697845 + MGP_CBAJ_P0054610 Tbr1 protein_coding protein_coding MGP_CBAJ_T0054611.1 MGP_CBAJ_G0025479.1 mouse_genomes_project 2 65689328 65697115 + Tbr1 protein_coding processed_transcript MGP_CBAJ_T0056214.1 MGP_CBAJ_G0025935.1 mouse_genomes_project 2 117038654 117049231 + MGP_CBAJ_P0056214 Kcna4 protein_coding protein_coding MGP_CBAJ_T0056215.1 MGP_CBAJ_G0025935.1 mouse_genomes_project 2 117039410 117045179 + Kcna4 protein_coding processed_transcript MGP_CBAJ_T0010282.1 MGP_CBAJ_G0008420.1 mouse_genomes_project 2 38847470 38847554 - Mir5128 miRNA miRNA MGP_CBAJ_T0101771.1 MGP_CBAJ_G0039802.1 mouse_genomes_project 2 10004771 10015467 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0053346.1 MGP_CBAJ_G0025261.1 mouse_genomes_project 2 30065943 30133879 + MGP_CBAJ_P0053346 Sptan1 protein_coding protein_coding MGP_CBAJ_T0053347.1 MGP_CBAJ_G0025261.1 mouse_genomes_project 2 30065943 30133876 + MGP_CBAJ_P0053347 Sptan1 protein_coding protein_coding MGP_CBAJ_T0053348.1 MGP_CBAJ_G0025261.1 mouse_genomes_project 2 30066060 30096461 + Sptan1 protein_coding retained_intron MGP_CBAJ_T0053349.1 MGP_CBAJ_G0025261.1 mouse_genomes_project 2 30066062 30067533 + Sptan1 protein_coding retained_intron MGP_CBAJ_T0053350.1 MGP_CBAJ_G0025261.1 mouse_genomes_project 2 30066063 30133873 + MGP_CBAJ_P0053350 Sptan1 protein_coding protein_coding MGP_CBAJ_T0053351.1 MGP_CBAJ_G0025261.1 mouse_genomes_project 2 30066063 30133879 + MGP_CBAJ_P0053351 Sptan1 protein_coding protein_coding MGP_CBAJ_T0053352.1 MGP_CBAJ_G0025261.1 mouse_genomes_project 2 30066063 30084880 + MGP_CBAJ_P0053352 Sptan1 protein_coding protein_coding MGP_CBAJ_T0053353.1 MGP_CBAJ_G0025261.1 mouse_genomes_project 2 30066066 30133879 + MGP_CBAJ_P0053353 Sptan1 protein_coding protein_coding MGP_CBAJ_T0053354.1 MGP_CBAJ_G0025261.1 mouse_genomes_project 2 30079576 30133612 + MGP_CBAJ_P0053354 Sptan1 protein_coding protein_coding MGP_CBAJ_T0053355.1 MGP_CBAJ_G0025261.1 mouse_genomes_project 2 30094379 30096454 + Sptan1 protein_coding retained_intron MGP_CBAJ_T0053356.1 MGP_CBAJ_G0025261.1 mouse_genomes_project 2 30104308 30110527 + Sptan1 protein_coding retained_intron MGP_CBAJ_T0053357.1 MGP_CBAJ_G0025261.1 mouse_genomes_project 2 30106512 30109071 + Sptan1 protein_coding retained_intron MGP_CBAJ_T0053358.1 MGP_CBAJ_G0025261.1 mouse_genomes_project 2 30124248 30127411 + Sptan1 protein_coding retained_intron MGP_CBAJ_T0053359.1 MGP_CBAJ_G0025261.1 mouse_genomes_project 2 30129991 30132945 + Sptan1 protein_coding retained_intron MGP_CBAJ_T0053360.1 MGP_CBAJ_G0025261.1 mouse_genomes_project 2 30130024 30132929 + Sptan1 protein_coding retained_intron MGP_CBAJ_T0053361.1 MGP_CBAJ_G0025261.1 mouse_genomes_project 2 30132736 30133603 + Sptan1 protein_coding retained_intron MGP_CBAJ_T0100348.1 MGP_CBAJ_G0038603.1 mouse_genomes_project 2 26614286 26614360 + Gm22879 snoRNA snoRNA MGP_CBAJ_T0058312.1 MGP_CBAJ_G0026451.1 mouse_genomes_project 2 171679893 171729638 - MGP_CBAJ_P0058312 Gm28036 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058313.1 MGP_CBAJ_G0026451.1 mouse_genomes_project 2 171679893 171706179 - MGP_CBAJ_P0058313 Gm28036 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058329.1 MGP_CBAJ_G0026451.1 mouse_genomes_project 2 171686982 171740880 - MGP_CBAJ_P0058329 Gm28036 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058330.1 MGP_CBAJ_G0026451.1 mouse_genomes_project 2 171686982 171740880 - MGP_CBAJ_P0058330 Gm28036 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058331.1 MGP_CBAJ_G0026451.1 mouse_genomes_project 2 171686982 171740880 - MGP_CBAJ_P0058331 Gm28036 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058332.1 MGP_CBAJ_G0026451.1 mouse_genomes_project 2 171687144 171729663 - MGP_CBAJ_P0058332 Gm28036 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058333.1 MGP_CBAJ_G0026451.1 mouse_genomes_project 2 171687150 171705022 - MGP_CBAJ_P0058333 Gm28036 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058334.1 MGP_CBAJ_G0026451.1 mouse_genomes_project 2 171687477 171729668 - MGP_CBAJ_P0058334 Gm28036 protein_coding protein_coding MGP_CBAJ_T0099106.1 MGP_CBAJ_G0037361.1 mouse_genomes_project 2 58185202 58185343 + Gm25489 snRNA snRNA MGP_CBAJ_T0001058.1 MGP_CBAJ_G0000990.1 mouse_genomes_project 2 129096141 129100440 + TEC TEC MGP_CBAJ_T0053122.1 MGP_CBAJ_G0025223.1 mouse_genomes_project 2 26895093 26915211 + MGP_CBAJ_P0053122 Dbh protein_coding protein_coding MGP_CBAJ_T0053123.1 MGP_CBAJ_G0025223.1 mouse_genomes_project 2 26909103 26909383 + Dbh protein_coding processed_transcript MGP_CBAJ_T0017516.1 MGP_CBAJ_G0015159.1 mouse_genomes_project 2 52894131 52981280 + Gm13483 processed_transcript processed_transcript MGP_CBAJ_T0017517.1 MGP_CBAJ_G0015159.1 mouse_genomes_project 2 52894185 53065651 + Gm13483 processed_transcript processed_transcript MGP_CBAJ_T0003861.1 MGP_CBAJ_G0003446.1 mouse_genomes_project 2 28454021 28471569 + Gm13381 antisense antisense MGP_CBAJ_T0003862.1 MGP_CBAJ_G0003446.1 mouse_genomes_project 2 28454345 28471851 + Gm13381 antisense antisense MGP_CBAJ_T0057405.1 MGP_CBAJ_G0026226.1 mouse_genomes_project 2 144030827 144035163 + Ap5s1 protein_coding processed_transcript MGP_CBAJ_T0057406.1 MGP_CBAJ_G0026226.1 mouse_genomes_project 2 144030835 144038507 + MGP_CBAJ_P0057406 Ap5s1 protein_coding protein_coding MGP_CBAJ_T0057407.1 MGP_CBAJ_G0026226.1 mouse_genomes_project 2 144034085 144038773 + Ap5s1 protein_coding processed_transcript MGP_CBAJ_T0057408.1 MGP_CBAJ_G0026226.1 mouse_genomes_project 2 144034112 144038365 + Ap5s1 protein_coding processed_transcript MGP_CBAJ_T0057409.1 MGP_CBAJ_G0026226.1 mouse_genomes_project 2 144034139 144039282 + MGP_CBAJ_P0057409 Ap5s1 protein_coding protein_coding MGP_CBAJ_T0057410.1 MGP_CBAJ_G0026226.1 mouse_genomes_project 2 144034155 144039285 + MGP_CBAJ_P0057410 Ap5s1 protein_coding protein_coding MGP_CBAJ_T0057411.1 MGP_CBAJ_G0026226.1 mouse_genomes_project 2 144034155 144039285 + MGP_CBAJ_P0057411 Ap5s1 protein_coding protein_coding MGP_CBAJ_T0057412.1 MGP_CBAJ_G0026226.1 mouse_genomes_project 2 144034319 144038635 + MGP_CBAJ_P0057412 Ap5s1 protein_coding protein_coding MGP_CBAJ_T0101777.1 MGP_CBAJ_G0039808.1 mouse_genomes_project 2 35748382 35749147 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013378.1 MGP_CBAJ_G0011490.1 mouse_genomes_project 2 62294710 62295573 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0053367.1 MGP_CBAJ_G0025264.1 mouse_genomes_project 2 30185650 30221110 + MGP_CBAJ_P0053367 Pkn3 protein_coding unknown_likely_coding MGP_CBAJ_T0053368.1 MGP_CBAJ_G0025264.1 mouse_genomes_project 2 30185650 30221110 + MGP_CBAJ_P0053368 Pkn3 protein_coding unknown_likely_coding MGP_CBAJ_T0053370.1 MGP_CBAJ_G0025264.1 mouse_genomes_project 2 30208061 30211503 + MGP_CBAJ_P0053370 Pkn3 protein_coding protein_coding MGP_CBAJ_T0053371.1 MGP_CBAJ_G0025264.1 mouse_genomes_project 2 30208120 30221388 + Pkn3 protein_coding retained_intron MGP_CBAJ_T0053372.1 MGP_CBAJ_G0025264.1 mouse_genomes_project 2 30208590 30210360 + MGP_CBAJ_P0053372 Pkn3 protein_coding protein_coding MGP_CBAJ_T0053373.1 MGP_CBAJ_G0025264.1 mouse_genomes_project 2 30208961 30221394 + MGP_CBAJ_P0053373 Pkn3 protein_coding protein_coding MGP_CBAJ_T0053374.1 MGP_CBAJ_G0025264.1 mouse_genomes_project 2 30209075 30215923 + Pkn3 protein_coding retained_intron MGP_CBAJ_T0053375.1 MGP_CBAJ_G0025264.1 mouse_genomes_project 2 30209131 30221397 + Pkn3 protein_coding retained_intron MGP_CBAJ_T0053376.1 MGP_CBAJ_G0025264.1 mouse_genomes_project 2 30211228 30213599 + Pkn3 protein_coding retained_intron MGP_CBAJ_T0053377.1 MGP_CBAJ_G0025264.1 mouse_genomes_project 2 30215028 30217411 + Pkn3 protein_coding retained_intron MGP_CBAJ_T0013391.1 MGP_CBAJ_G0011503.1 mouse_genomes_project 2 65572657 65573356 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0056752.1 MGP_CBAJ_G0026077.1 mouse_genomes_project 2 132538117 132557000 - MGP_CBAJ_P0056752 Lcmt2 protein_coding protein_coding MGP_CBAJ_T0056753.1 MGP_CBAJ_G0026077.1 mouse_genomes_project 2 132554219 132557275 - MGP_CBAJ_P0056753 Lcmt2 protein_coding protein_coding MGP_CBAJ_T0052757.1 MGP_CBAJ_G0025155.1 mouse_genomes_project 2 24857615 24863063 + MGP_CBAJ_P0052757 Entpd2 protein_coding protein_coding MGP_CBAJ_T0052758.1 MGP_CBAJ_G0025155.1 mouse_genomes_project 2 24857657 24863034 + Entpd2 protein_coding processed_transcript MGP_CBAJ_T0052759.1 MGP_CBAJ_G0025155.1 mouse_genomes_project 2 24860494 24861591 + Entpd2 protein_coding processed_transcript MGP_CBAJ_T0059435.1 MGP_CBAJ_G0026705.1 mouse_genomes_project 2 200184883 200186408 + MGP_CBAJ_P0059435 Ppdpf protein_coding protein_coding MGP_CBAJ_T0059436.1 MGP_CBAJ_G0026705.1 mouse_genomes_project 2 200184932 200186378 + Ppdpf protein_coding retained_intron MGP_CBAJ_T0059437.1 MGP_CBAJ_G0026705.1 mouse_genomes_project 2 200184972 200186141 + MGP_CBAJ_P0059437 Ppdpf protein_coding protein_coding MGP_CBAJ_T0059438.1 MGP_CBAJ_G0026705.1 mouse_genomes_project 2 200184983 200186141 + Ppdpf protein_coding retained_intron MGP_CBAJ_T0059439.1 MGP_CBAJ_G0026705.1 mouse_genomes_project 2 200185172 200186141 + Ppdpf protein_coding retained_intron MGP_CBAJ_T0059440.1 MGP_CBAJ_G0026705.1 mouse_genomes_project 2 200185550 200186141 + Ppdpf protein_coding retained_intron MGP_CBAJ_T0007026.1 MGP_CBAJ_G0005760.1 mouse_genomes_project 2 3677574 3678895 - Gm13383 lincRNA lincRNA MGP_CBAJ_T0056322.1 MGP_CBAJ_G0025990.1 mouse_genomes_project 2 123054697 123076054 - Ryr3 protein_coding processed_transcript MGP_CBAJ_T0056323.1 MGP_CBAJ_G0025990.1 mouse_genomes_project 2 123054706 123686675 - MGP_CBAJ_P0056323 Ryr3 protein_coding unknown_likely_coding MGP_CBAJ_T0056324.1 MGP_CBAJ_G0025990.1 mouse_genomes_project 2 123054722 123478150 - MGP_CBAJ_P0056324 Ryr3 protein_coding protein_coding MGP_CBAJ_T0056325.1 MGP_CBAJ_G0025990.1 mouse_genomes_project 2 123054722 123686736 - MGP_CBAJ_P0056325 Ryr3 protein_coding protein_coding MGP_CBAJ_T0056326.1 MGP_CBAJ_G0025990.1 mouse_genomes_project 2 123055388 123686753 - Ryr3 protein_coding processed_transcript MGP_CBAJ_T0056327.1 MGP_CBAJ_G0025990.1 mouse_genomes_project 2 123059916 123063851 - Ryr3 protein_coding processed_transcript MGP_CBAJ_T0056328.1 MGP_CBAJ_G0025990.1 mouse_genomes_project 2 123301378 123353356 - Ryr3 protein_coding retained_intron MGP_CBAJ_T0056329.1 MGP_CBAJ_G0025990.1 mouse_genomes_project 2 123412065 123686747 - Ryr3 protein_coding retained_intron MGP_CBAJ_T0056330.1 MGP_CBAJ_G0025990.1 mouse_genomes_project 2 123442713 123686781 - Ryr3 protein_coding retained_intron MGP_CBAJ_T0010268.1 MGP_CBAJ_G0008406.1 mouse_genomes_project 2 30098372 30098443 + Mir6997 miRNA miRNA MGP_CBAJ_T0017535.1 MGP_CBAJ_G0015173.1 mouse_genomes_project 2 81289909 81294995 + Gm13657 processed_transcript processed_transcript MGP_CBAJ_T0059344.1 MGP_CBAJ_G0026689.1 mouse_genomes_project 2 199512237 199516568 + MGP_CBAJ_P0059344 Mrgbp protein_coding protein_coding MGP_CBAJ_T0059345.1 MGP_CBAJ_G0026689.1 mouse_genomes_project 2 199513645 199517221 + MGP_CBAJ_P0059345 Mrgbp protein_coding protein_coding MGP_CBAJ_T0059346.1 MGP_CBAJ_G0026689.1 mouse_genomes_project 2 199513656 199517238 + Mrgbp protein_coding retained_intron MGP_CBAJ_T0059347.1 MGP_CBAJ_G0026689.1 mouse_genomes_project 2 199513659 199517238 + Mrgbp protein_coding retained_intron MGP_CBAJ_T0059348.1 MGP_CBAJ_G0026689.1 mouse_genomes_project 2 199513665 199517238 + Mrgbp protein_coding retained_intron MGP_CBAJ_T0059349.1 MGP_CBAJ_G0026689.1 mouse_genomes_project 2 199513691 199517238 + Mrgbp protein_coding retained_intron MGP_CBAJ_T0058015.1 MGP_CBAJ_G0026386.1 mouse_genomes_project 2 168404467 168426263 - MGP_CBAJ_P0058015 Plagl2 protein_coding protein_coding MGP_CBAJ_T0058016.1 MGP_CBAJ_G0026386.1 mouse_genomes_project 2 168404480 168418336 - MGP_CBAJ_P0058016 Plagl2 protein_coding protein_coding MGP_CBAJ_T0053828.1 MGP_CBAJ_G0025330.1 mouse_genomes_project 2 33360536 33366006 - Cdk9 protein_coding retained_intron MGP_CBAJ_T0053829.1 MGP_CBAJ_G0025330.1 mouse_genomes_project 2 33362206 33367743 - MGP_CBAJ_P0053829 Cdk9 protein_coding protein_coding MGP_CBAJ_T0053830.1 MGP_CBAJ_G0025330.1 mouse_genomes_project 2 33362206 33367226 - MGP_CBAJ_P0053830 Cdk9 protein_coding protein_coding MGP_CBAJ_T0053831.1 MGP_CBAJ_G0025330.1 mouse_genomes_project 2 33362605 33368035 - MGP_CBAJ_P0053831 Cdk9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053832.1 MGP_CBAJ_G0025330.1 mouse_genomes_project 2 33363059 33364680 - Cdk9 protein_coding retained_intron MGP_CBAJ_T0053833.1 MGP_CBAJ_G0025330.1 mouse_genomes_project 2 33364490 33365308 - Cdk9 protein_coding retained_intron MGP_CBAJ_T0053834.1 MGP_CBAJ_G0025330.1 mouse_genomes_project 2 33364614 33365461 - Cdk9 protein_coding retained_intron MGP_CBAJ_T0053835.1 MGP_CBAJ_G0025330.1 mouse_genomes_project 2 33364814 33367716 - MGP_CBAJ_P0053835 Cdk9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053836.1 MGP_CBAJ_G0025330.1 mouse_genomes_project 2 33365116 33367212 - MGP_CBAJ_P0053836 Cdk9 protein_coding protein_coding MGP_CBAJ_T0007279.1 MGP_CBAJ_G0005961.1 mouse_genomes_project 2 177495065 177542276 + Gm14243 lincRNA lincRNA MGP_CBAJ_T0100416.1 MGP_CBAJ_G0038671.1 mouse_genomes_project 2 174354439 174354572 + Gm25187 snoRNA snoRNA MGP_CBAJ_T0003968.1 MGP_CBAJ_G0003523.1 mouse_genomes_project 2 113583022 113586893 + Gm13883 antisense antisense MGP_CBAJ_T0003969.1 MGP_CBAJ_G0003523.1 mouse_genomes_project 2 113583022 113606864 + Gm13883 antisense antisense MGP_CBAJ_T0101778.1 MGP_CBAJ_G0039809.1 mouse_genomes_project 2 37357314 37358220 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0007307.1 MGP_CBAJ_G0005985.1 mouse_genomes_project 2 185791705 185797808 - Gm14262 lincRNA lincRNA MGP_CBAJ_T0004046.1 MGP_CBAJ_G0003576.1 mouse_genomes_project 2 161773465 161774347 - AI646519 antisense antisense MGP_CBAJ_T0013529.1 MGP_CBAJ_G0011641.1 mouse_genomes_project 2 116629576 116631811 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055926.1 MGP_CBAJ_G0025878.1 mouse_genomes_project 2 102039512 102055948 - MGP_CBAJ_P0055926 Accs protein_coding protein_coding MGP_CBAJ_T0055927.1 MGP_CBAJ_G0025878.1 mouse_genomes_project 2 102041488 102055686 - MGP_CBAJ_P0055927 Accs protein_coding protein_coding MGP_CBAJ_T0055928.1 MGP_CBAJ_G0025878.1 mouse_genomes_project 2 102041488 102055806 - MGP_CBAJ_P0055928 Accs protein_coding protein_coding MGP_CBAJ_T0055929.1 MGP_CBAJ_G0025878.1 mouse_genomes_project 2 102042038 102045410 - Accs protein_coding retained_intron MGP_CBAJ_T0055930.1 MGP_CBAJ_G0025878.1 mouse_genomes_project 2 102043069 102055950 - Accs protein_coding retained_intron MGP_CBAJ_T0055931.1 MGP_CBAJ_G0025878.1 mouse_genomes_project 2 102044061 102053944 - MGP_CBAJ_P0055931 Accs protein_coding nonsense_mediated_decay MGP_CBAJ_T0055932.1 MGP_CBAJ_G0025878.1 mouse_genomes_project 2 102045243 102048319 - Accs protein_coding retained_intron MGP_CBAJ_T0055933.1 MGP_CBAJ_G0025878.1 mouse_genomes_project 2 102047330 102048432 - Accs protein_coding retained_intron MGP_CBAJ_T0055934.1 MGP_CBAJ_G0025878.1 mouse_genomes_project 2 102048619 102055823 - MGP_CBAJ_P0055934 Accs protein_coding protein_coding MGP_CBAJ_T0055935.1 MGP_CBAJ_G0025878.1 mouse_genomes_project 2 102048848 102055946 - Accs protein_coding retained_intron MGP_CBAJ_T0055936.1 MGP_CBAJ_G0025878.1 mouse_genomes_project 2 102048859 102055946 - Accs protein_coding retained_intron MGP_CBAJ_T0055937.1 MGP_CBAJ_G0025878.1 mouse_genomes_project 2 102051071 102051799 - Accs protein_coding processed_transcript MGP_CBAJ_T0059015.1 MGP_CBAJ_G0026602.1 mouse_genomes_project 2 184276668 184303280 - MGP_CBAJ_P0059015 Znfx1 protein_coding protein_coding MGP_CBAJ_T0059016.1 MGP_CBAJ_G0026602.1 mouse_genomes_project 2 184276674 184284371 - MGP_CBAJ_P0059016 Znfx1 protein_coding protein_coding MGP_CBAJ_T0059017.1 MGP_CBAJ_G0026602.1 mouse_genomes_project 2 184284907 184300691 - MGP_CBAJ_P0059017 Znfx1 protein_coding protein_coding MGP_CBAJ_T0059018.1 MGP_CBAJ_G0026602.1 mouse_genomes_project 2 184284992 184302982 - MGP_CBAJ_P0059018 Znfx1 protein_coding protein_coding MGP_CBAJ_T0059019.1 MGP_CBAJ_G0026602.1 mouse_genomes_project 2 184289960 184302905 - Znfx1 protein_coding retained_intron MGP_CBAJ_T0013526.1 MGP_CBAJ_G0011638.1 mouse_genomes_project 2 115605818 115605974 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0051937.1 MGP_CBAJ_G0025014.1 mouse_genomes_project 2 69483 192243 + MGP_CBAJ_P0051937 Fam171a1 protein_coding protein_coding MGP_CBAJ_T0051938.1 MGP_CBAJ_G0025014.1 mouse_genomes_project 2 69612 192240 + MGP_CBAJ_P0051938 Fam171a1 protein_coding protein_coding MGP_CBAJ_T0097807.1 MGP_CBAJ_G0036080.1 mouse_genomes_project 2 102174568 102175317 - pseudogene pseudogene MGP_CBAJ_T0057319.1 MGP_CBAJ_G0026209.1 mouse_genomes_project 2 143305372 143352513 - MGP_CBAJ_P0057319 Ubox5 protein_coding protein_coding MGP_CBAJ_T0057320.1 MGP_CBAJ_G0026209.1 mouse_genomes_project 2 143318860 143352502 - MGP_CBAJ_P0057320 Ubox5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052680.1 MGP_CBAJ_G0025141.1 mouse_genomes_project 2 24678079 24679250 - MGP_CBAJ_P0052680 Cysrt1 protein_coding protein_coding MGP_CBAJ_T0052681.1 MGP_CBAJ_G0025141.1 mouse_genomes_project 2 24678250 24679159 - MGP_CBAJ_P0052681 Cysrt1 protein_coding protein_coding MGP_CBAJ_T0052682.1 MGP_CBAJ_G0025141.1 mouse_genomes_project 2 24678418 24681733 - MGP_CBAJ_P0052682 Cysrt1 protein_coding protein_coding MGP_CBAJ_T0007090.1 MGP_CBAJ_G0005808.1 mouse_genomes_project 2 47887031 47888837 + 1700019E08Rik lincRNA lincRNA MGP_CBAJ_T0007091.1 MGP_CBAJ_G0005808.1 mouse_genomes_project 2 47887226 47888456 + 1700019E08Rik lincRNA lincRNA MGP_CBAJ_T0010309.1 MGP_CBAJ_G0008447.1 mouse_genomes_project 2 100640635 100640710 + Mir7222 miRNA miRNA MGP_CBAJ_T0057211.1 MGP_CBAJ_G0026181.1 mouse_genomes_project 2 141627481 141663869 + MGP_CBAJ_P0057211 Ttl protein_coding protein_coding MGP_CBAJ_T0057212.1 MGP_CBAJ_G0026181.1 mouse_genomes_project 2 141627524 141629645 + Ttl protein_coding processed_transcript MGP_CBAJ_T0057213.1 MGP_CBAJ_G0026181.1 mouse_genomes_project 2 141637595 141657343 + MGP_CBAJ_P0057213 Ttl protein_coding protein_coding MGP_CBAJ_T0052466.1 MGP_CBAJ_G0025101.1 mouse_genomes_project 2 20519128 20996790 + MGP_CBAJ_P0052466 Gpr158 protein_coding protein_coding MGP_CBAJ_T0052467.1 MGP_CBAJ_G0025101.1 mouse_genomes_project 2 20519153 20973183 + Gpr158 protein_coding retained_intron MGP_CBAJ_T0055490.1 MGP_CBAJ_G0025754.1 mouse_genomes_project 2 95610168 95611116 + MGP_CBAJ_P0055490 Olfr1176 protein_coding protein_coding MGP_CBAJ_T0101805.1 MGP_CBAJ_G0039836.1 mouse_genomes_project 2 93927208 93928147 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0052873.1 MGP_CBAJ_G0025176.1 mouse_genomes_project 2 25175959 25180782 + MGP_CBAJ_P0052873 Lcn6 protein_coding protein_coding MGP_CBAJ_T0052874.1 MGP_CBAJ_G0025176.1 mouse_genomes_project 2 25178439 25180779 + MGP_CBAJ_P0052874 Lcn6 protein_coding protein_coding MGP_CBAJ_T0052875.1 MGP_CBAJ_G0025176.1 mouse_genomes_project 2 25179134 25180775 + MGP_CBAJ_P0052875 Lcn6 protein_coding protein_coding MGP_CBAJ_T0052876.1 MGP_CBAJ_G0025176.1 mouse_genomes_project 2 25179286 25180775 + Lcn6 protein_coding processed_transcript MGP_CBAJ_T0017674.1 MGP_CBAJ_G0015242.1 mouse_genomes_project 2 199720813 199732756 - Gm14343 processed_transcript processed_transcript MGP_CBAJ_T0055987.1 MGP_CBAJ_G0025889.1 mouse_genomes_project 2 110704402 110715617 - MGP_CBAJ_P0055987 Rag1 protein_coding protein_coding MGP_CBAJ_T0058883.1 MGP_CBAJ_G0026581.1 mouse_genomes_project 2 181892230 181899328 + MGP_CBAJ_P0058883 Cd40 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058884.1 MGP_CBAJ_G0026581.1 mouse_genomes_project 2 181892230 181913443 + MGP_CBAJ_P0058884 Cd40 protein_coding protein_coding MGP_CBAJ_T0058885.1 MGP_CBAJ_G0026581.1 mouse_genomes_project 2 181892239 181912146 + MGP_CBAJ_P0058885 Cd40 protein_coding protein_coding MGP_CBAJ_T0058886.1 MGP_CBAJ_G0026581.1 mouse_genomes_project 2 181892283 181911269 + MGP_CBAJ_P0058886 Cd40 protein_coding protein_coding MGP_CBAJ_T0058887.1 MGP_CBAJ_G0026581.1 mouse_genomes_project 2 181892284 181899385 + MGP_CBAJ_P0058887 Cd40 protein_coding protein_coding MGP_CBAJ_T0058888.1 MGP_CBAJ_G0026581.1 mouse_genomes_project 2 181892307 181911491 + MGP_CBAJ_P0058888 Cd40 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058889.1 MGP_CBAJ_G0026581.1 mouse_genomes_project 2 181899280 181903297 + Cd40 protein_coding retained_intron MGP_CBAJ_T0004063.1 MGP_CBAJ_G0003591.1 mouse_genomes_project 2 171384621 171385785 + Gm16098 antisense antisense MGP_CBAJ_T0055404.1 MGP_CBAJ_G0025680.1 mouse_genomes_project 2 93173341 93174688 - MGP_CBAJ_P0055404 Olfr1058 protein_coding protein_coding MGP_CBAJ_T0055246.1 MGP_CBAJ_G0025609.1 mouse_genomes_project 2 90773865 90889642 - MGP_CBAJ_P0055246 Calcrl protein_coding protein_coding MGP_CBAJ_T0055247.1 MGP_CBAJ_G0025609.1 mouse_genomes_project 2 90773898 90827612 - MGP_CBAJ_P0055247 Calcrl protein_coding protein_coding MGP_CBAJ_T0055248.1 MGP_CBAJ_G0025609.1 mouse_genomes_project 2 90827548 90889497 - Calcrl protein_coding processed_transcript MGP_CBAJ_T0017552.1 MGP_CBAJ_G0015185.1 mouse_genomes_project 2 98842541 98856057 - Gm13778 processed_transcript processed_transcript MGP_CBAJ_T0017553.1 MGP_CBAJ_G0015185.1 mouse_genomes_project 2 98842844 98856072 - Gm13778 processed_transcript processed_transcript MGP_CBAJ_T0057198.1 MGP_CBAJ_G0026175.1 mouse_genomes_project 2 141348857 141390298 + MGP_CBAJ_P0057198 Tmem87b protein_coding protein_coding MGP_CBAJ_T0057199.1 MGP_CBAJ_G0026175.1 mouse_genomes_project 2 141349078 141390301 + MGP_CBAJ_P0057199 Tmem87b protein_coding unknown_likely_coding MGP_CBAJ_T0057200.1 MGP_CBAJ_G0026175.1 mouse_genomes_project 2 141349123 141387829 + MGP_CBAJ_P0057200 Tmem87b protein_coding protein_coding MGP_CBAJ_T0057201.1 MGP_CBAJ_G0026175.1 mouse_genomes_project 2 141367710 141386353 + Tmem87b protein_coding processed_transcript MGP_CBAJ_T0057202.1 MGP_CBAJ_G0026175.1 mouse_genomes_project 2 141377248 141385762 + Tmem87b protein_coding retained_intron MGP_CBAJ_T0057203.1 MGP_CBAJ_G0026175.1 mouse_genomes_project 2 141385996 141387448 + Tmem87b protein_coding processed_transcript MGP_CBAJ_T0059445.1 MGP_CBAJ_G0026709.1 mouse_genomes_project 2 200230427 200247899 - MGP_CBAJ_P0059445 Helz2 protein_coding protein_coding MGP_CBAJ_T0059446.1 MGP_CBAJ_G0026709.1 mouse_genomes_project 2 200230428 200247897 - MGP_CBAJ_P0059446 Helz2 protein_coding protein_coding MGP_CBAJ_T0059447.1 MGP_CBAJ_G0026709.1 mouse_genomes_project 2 200230431 200247835 - MGP_CBAJ_P0059447 Helz2 protein_coding protein_coding MGP_CBAJ_T0059448.1 MGP_CBAJ_G0026709.1 mouse_genomes_project 2 200230434 200241628 - Helz2 protein_coding retained_intron MGP_CBAJ_T0059449.1 MGP_CBAJ_G0026709.1 mouse_genomes_project 2 200243030 200247897 - Helz2 protein_coding retained_intron MGP_CBAJ_T0013695.1 MGP_CBAJ_G0011807.1 mouse_genomes_project 2 197764870 197765885 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007077.1 MGP_CBAJ_G0005798.1 mouse_genomes_project 2 34795686 34797765 + Gm13404 lincRNA lincRNA MGP_CBAJ_T0052092.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 3993931 4948582 - MGP_CBAJ_P0052092 Celf2 protein_coding protein_coding MGP_CBAJ_T0052093.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 3993942 4369494 - MGP_CBAJ_P0052093 Celf2 protein_coding protein_coding MGP_CBAJ_T0052094.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 3993942 4369494 - MGP_CBAJ_P0052094 Celf2 protein_coding protein_coding MGP_CBAJ_T0052095.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 3993942 4201278 - MGP_CBAJ_P0052095 Celf2 protein_coding protein_coding MGP_CBAJ_T0052096.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 3997779 4369494 - MGP_CBAJ_P0052096 Celf2 protein_coding protein_coding MGP_CBAJ_T0052097.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 3999343 4580646 - MGP_CBAJ_P0052097 Celf2 protein_coding protein_coding MGP_CBAJ_T0052098.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4000721 4369445 - MGP_CBAJ_P0052098 Celf2 protein_coding protein_coding MGP_CBAJ_T0052099.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4000755 4201278 - MGP_CBAJ_P0052099 Celf2 protein_coding protein_coding MGP_CBAJ_T0052100.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4000755 4580586 - MGP_CBAJ_P0052100 Celf2 protein_coding protein_coding MGP_CBAJ_T0052101.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4001549 4201591 - MGP_CBAJ_P0052101 Celf2 protein_coding protein_coding MGP_CBAJ_T0052102.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4002154 4201276 - MGP_CBAJ_P0052102 Celf2 protein_coding protein_coding MGP_CBAJ_T0052103.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4002154 4201276 - MGP_CBAJ_P0052103 Celf2 protein_coding protein_coding MGP_CBAJ_T0052104.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4002248 4369444 - MGP_CBAJ_P0052104 Celf2 protein_coding protein_coding MGP_CBAJ_T0052105.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4005215 4354820 - MGP_CBAJ_P0052105 Celf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052106.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4005228 4053800 - Celf2 protein_coding processed_transcript MGP_CBAJ_T0052107.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4012245 4948475 - MGP_CBAJ_P0052107 Celf2 protein_coding protein_coding MGP_CBAJ_T0052108.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4046326 4201278 - Celf2 protein_coding retained_intron MGP_CBAJ_T0052109.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4065614 4082058 - Celf2 protein_coding processed_transcript MGP_CBAJ_T0052110.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4069208 4369126 - Celf2 protein_coding processed_transcript MGP_CBAJ_T0052111.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4081606 4948780 - MGP_CBAJ_P0052111 Celf2 protein_coding protein_coding MGP_CBAJ_T0052112.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4086116 4369390 - Celf2 protein_coding retained_intron MGP_CBAJ_T0052113.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4089405 4201879 - Celf2 protein_coding retained_intron MGP_CBAJ_T0052114.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4090581 4354195 - MGP_CBAJ_P0052114 Celf2 protein_coding protein_coding MGP_CBAJ_T0052115.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4128697 4369390 - Celf2 protein_coding retained_intron MGP_CBAJ_T0052116.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4132407 4580551 - MGP_CBAJ_P0052116 Celf2 protein_coding protein_coding MGP_CBAJ_T0052117.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4201118 4201872 - MGP_CBAJ_P0052117 Celf2 protein_coding protein_coding MGP_CBAJ_T0052118.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4569362 4580657 - Celf2 protein_coding processed_transcript MGP_CBAJ_T0052119.1 MGP_CBAJ_G0025044.1 mouse_genomes_project 2 4946657 5062300 - Celf2 protein_coding processed_transcript MGP_CBAJ_T0058264.1 MGP_CBAJ_G0026443.1 mouse_genomes_project 2 171510035 171512062 + MGP_CBAJ_P0058264 Gm15557 protein_coding protein_coding MGP_CBAJ_T0013389.1 MGP_CBAJ_G0011501.1 mouse_genomes_project 2 64805851 64806471 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007306.1 MGP_CBAJ_G0005984.1 mouse_genomes_project 2 185637893 185639804 - E130018N17Rik lincRNA lincRNA MGP_CBAJ_T0055422.1 MGP_CBAJ_G0025697.1 mouse_genomes_project 2 93900958 93901888 - MGP_CBAJ_P0055422 Olfr1101 protein_coding protein_coding MGP_CBAJ_T0007238.1 MGP_CBAJ_G0005929.1 mouse_genomes_project 2 150741094 150783737 + Gm14055 lincRNA lincRNA MGP_CBAJ_T0058175.1 MGP_CBAJ_G0026428.1 mouse_genomes_project 2 170889578 170895523 + MGP_CBAJ_P0058175 Trp53inp2 protein_coding protein_coding MGP_CBAJ_T0058176.1 MGP_CBAJ_G0026428.1 mouse_genomes_project 2 170890325 170899242 + MGP_CBAJ_P0058176 Trp53inp2 protein_coding protein_coding MGP_CBAJ_T0058177.1 MGP_CBAJ_G0026428.1 mouse_genomes_project 2 170890351 170896147 + MGP_CBAJ_P0058177 Trp53inp2 protein_coding protein_coding MGP_CBAJ_T0058178.1 MGP_CBAJ_G0026428.1 mouse_genomes_project 2 170890371 170895422 + Trp53inp2 protein_coding retained_intron MGP_CBAJ_T0058179.1 MGP_CBAJ_G0026428.1 mouse_genomes_project 2 170890713 170895434 + MGP_CBAJ_P0058179 Trp53inp2 protein_coding protein_coding MGP_CBAJ_T0054948.1 MGP_CBAJ_G0025543.1 mouse_genomes_project 2 77588085 77598805 + MGP_CBAJ_P0054948 Cdca7 protein_coding protein_coding MGP_CBAJ_T0054949.1 MGP_CBAJ_G0025543.1 mouse_genomes_project 2 77588179 77594424 + MGP_CBAJ_P0054949 Cdca7 protein_coding protein_coding MGP_CBAJ_T0054950.1 MGP_CBAJ_G0025543.1 mouse_genomes_project 2 77588316 77593787 + Cdca7 protein_coding processed_transcript MGP_CBAJ_T0054951.1 MGP_CBAJ_G0025543.1 mouse_genomes_project 2 77595490 77596670 + Cdca7 protein_coding processed_transcript MGP_CBAJ_T0054952.1 MGP_CBAJ_G0025543.1 mouse_genomes_project 2 77597033 77598125 + Cdca7 protein_coding processed_transcript MGP_CBAJ_T0053455.1 MGP_CBAJ_G0025278.1 mouse_genomes_project 2 30532846 30555593 + MGP_CBAJ_P0053455 Fam73b protein_coding protein_coding MGP_CBAJ_T0053456.1 MGP_CBAJ_G0025278.1 mouse_genomes_project 2 30532858 30537323 + Fam73b protein_coding processed_transcript MGP_CBAJ_T0053457.1 MGP_CBAJ_G0025278.1 mouse_genomes_project 2 30532867 30547736 + MGP_CBAJ_P0053457 Fam73b protein_coding protein_coding MGP_CBAJ_T0053458.1 MGP_CBAJ_G0025278.1 mouse_genomes_project 2 30532879 30537930 + Fam73b protein_coding retained_intron MGP_CBAJ_T0053459.1 MGP_CBAJ_G0025278.1 mouse_genomes_project 2 30532906 30539031 + MGP_CBAJ_P0053459 Fam73b protein_coding protein_coding MGP_CBAJ_T0053460.1 MGP_CBAJ_G0025278.1 mouse_genomes_project 2 30532909 30555591 + MGP_CBAJ_P0053460 Fam73b protein_coding protein_coding MGP_CBAJ_T0053461.1 MGP_CBAJ_G0025278.1 mouse_genomes_project 2 30536308 30537931 + Fam73b protein_coding retained_intron MGP_CBAJ_T0053462.1 MGP_CBAJ_G0025278.1 mouse_genomes_project 2 30537040 30539828 + MGP_CBAJ_P0053462 Fam73b protein_coding protein_coding MGP_CBAJ_T0053463.1 MGP_CBAJ_G0025278.1 mouse_genomes_project 2 30539907 30545301 + Fam73b protein_coding retained_intron MGP_CBAJ_T0053464.1 MGP_CBAJ_G0025278.1 mouse_genomes_project 2 30546876 30552079 + Fam73b protein_coding retained_intron MGP_CBAJ_T0053465.1 MGP_CBAJ_G0025278.1 mouse_genomes_project 2 30551784 30554172 + MGP_CBAJ_P0053465 Fam73b protein_coding protein_coding MGP_CBAJ_T0053466.1 MGP_CBAJ_G0025278.1 mouse_genomes_project 2 30552015 30554278 + MGP_CBAJ_P0053466 Fam73b protein_coding protein_coding MGP_CBAJ_T0054812.1 MGP_CBAJ_G0025519.1 mouse_genomes_project 2 74628406 74640898 + MGP_CBAJ_P0054812 Ssb protein_coding protein_coding MGP_CBAJ_T0054813.1 MGP_CBAJ_G0025519.1 mouse_genomes_project 2 74628406 74640958 + MGP_CBAJ_P0054813 Ssb protein_coding protein_coding MGP_CBAJ_T0054814.1 MGP_CBAJ_G0025519.1 mouse_genomes_project 2 74628467 74640622 + MGP_CBAJ_P0054814 Ssb protein_coding nonsense_mediated_decay MGP_CBAJ_T0054815.1 MGP_CBAJ_G0025519.1 mouse_genomes_project 2 74628530 74636661 + MGP_CBAJ_P0054815 Ssb protein_coding protein_coding MGP_CBAJ_T0054816.1 MGP_CBAJ_G0025519.1 mouse_genomes_project 2 74630133 74638259 + Ssb protein_coding processed_transcript MGP_CBAJ_T0054817.1 MGP_CBAJ_G0025519.1 mouse_genomes_project 2 74637887 74640622 + MGP_CBAJ_P0054817 Ssb protein_coding protein_coding MGP_CBAJ_T0054803.1 MGP_CBAJ_G0025517.1 mouse_genomes_project 2 74546816 74552820 + MGP_CBAJ_P0054803 Phospho2 protein_coding protein_coding MGP_CBAJ_T0054804.1 MGP_CBAJ_G0025517.1 mouse_genomes_project 2 74546829 74554390 + MGP_CBAJ_P0054804 Phospho2 protein_coding protein_coding MGP_CBAJ_T0054805.1 MGP_CBAJ_G0025517.1 mouse_genomes_project 2 74546843 74554390 + MGP_CBAJ_P0054805 Phospho2 protein_coding protein_coding MGP_CBAJ_T0054806.1 MGP_CBAJ_G0025517.1 mouse_genomes_project 2 74546853 74549631 + Phospho2 protein_coding processed_transcript MGP_CBAJ_T0054807.1 MGP_CBAJ_G0025517.1 mouse_genomes_project 2 74546905 74557352 + Phospho2 protein_coding processed_transcript MGP_CBAJ_T0054808.1 MGP_CBAJ_G0025517.1 mouse_genomes_project 2 74548131 74554389 + MGP_CBAJ_P0054808 Phospho2 protein_coding protein_coding MGP_CBAJ_T0010221.1 MGP_CBAJ_G0008359.1 mouse_genomes_project 2 8374721 8374802 + Mir669d-2 miRNA miRNA MGP_CBAJ_T0101806.1 MGP_CBAJ_G0039837.1 mouse_genomes_project 2 94239385 94241822 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0059178.1 MGP_CBAJ_G0026646.1 mouse_genomes_project 2 191301163 191316756 + MGP_CBAJ_P0059178 Rae1 protein_coding protein_coding MGP_CBAJ_T0059179.1 MGP_CBAJ_G0026646.1 mouse_genomes_project 2 191301170 191310452 + MGP_CBAJ_P0059179 Rae1 protein_coding protein_coding MGP_CBAJ_T0059180.1 MGP_CBAJ_G0026646.1 mouse_genomes_project 2 191307612 191310451 + Rae1 protein_coding retained_intron MGP_CBAJ_T0059181.1 MGP_CBAJ_G0026646.1 mouse_genomes_project 2 191312667 191313826 + Rae1 protein_coding retained_intron MGP_CBAJ_T0059182.1 MGP_CBAJ_G0026646.1 mouse_genomes_project 2 191313465 191316444 + Rae1 protein_coding retained_intron MGP_CBAJ_T0011368.1 MGP_CBAJ_G0009506.1 mouse_genomes_project 2 47222506 47222637 + Gm27761 misc_RNA misc_RNA MGP_CBAJ_T0058225.1 MGP_CBAJ_G0026435.1 mouse_genomes_project 2 171250549 171278936 - MGP_CBAJ_P0058225 Edem2 protein_coding protein_coding MGP_CBAJ_T0058226.1 MGP_CBAJ_G0026435.1 mouse_genomes_project 2 171254595 171263011 - Edem2 protein_coding processed_transcript MGP_CBAJ_T0058227.1 MGP_CBAJ_G0026435.1 mouse_genomes_project 2 171257518 171260685 - Edem2 protein_coding retained_intron MGP_CBAJ_T0058228.1 MGP_CBAJ_G0026435.1 mouse_genomes_project 2 171258698 171266073 - Edem2 protein_coding retained_intron MGP_CBAJ_T0055278.1 MGP_CBAJ_G0025613.1 mouse_genomes_project 2 91132983 91135347 + protein_coding processed_transcript MGP_CBAJ_T0001006.1 MGP_CBAJ_G0000938.1 mouse_genomes_project 2 11363497 11365757 - TEC TEC MGP_CBAJ_T0051944.1 MGP_CBAJ_G0025017.1 mouse_genomes_project 2 317916 327629 + MGP_CBAJ_P0051944 Acbd7 protein_coding unknown_likely_coding MGP_CBAJ_T0051945.1 MGP_CBAJ_G0025017.1 mouse_genomes_project 2 323020 327851 + MGP_CBAJ_P0051945 Acbd7 protein_coding protein_coding MGP_CBAJ_T0004008.1 MGP_CBAJ_G0003550.1 mouse_genomes_project 2 141835140 141859334 + Gm14024 antisense antisense MGP_CBAJ_T0017474.1 MGP_CBAJ_G0015135.1 mouse_genomes_project 2 11522827 11585277 + Gm13270 processed_transcript antisense MGP_CBAJ_T0017475.1 MGP_CBAJ_G0015135.1 mouse_genomes_project 2 11522828 11527822 + Gm13270 processed_transcript retained_intron MGP_CBAJ_T0013417.1 MGP_CBAJ_G0011529.1 mouse_genomes_project 2 77661359 77661760 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0058025.1 MGP_CBAJ_G0026388.1 mouse_genomes_project 2 168497436 168555513 + MGP_CBAJ_P0058025 Kif3b protein_coding protein_coding MGP_CBAJ_T0007300.1 MGP_CBAJ_G0005979.1 mouse_genomes_project 2 185181061 185186164 + Gm14321 lincRNA lincRNA MGP_CBAJ_T0007301.1 MGP_CBAJ_G0005979.1 mouse_genomes_project 2 185181130 185185721 + Gm14321 lincRNA lincRNA MGP_CBAJ_T0100419.1 MGP_CBAJ_G0038674.1 mouse_genomes_project 2 177276894 177277019 + Gm25561 snoRNA snoRNA MGP_CBAJ_T0056291.1 MGP_CBAJ_G0025973.1 mouse_genomes_project 2 122273151 122274114 - MGP_CBAJ_P0056291 Olfr1308 protein_coding protein_coding MGP_CBAJ_T0058713.1 MGP_CBAJ_G0026525.1 mouse_genomes_project 2 180424224 180429894 + MGP_CBAJ_P0058713 Kcnk15 protein_coding protein_coding MGP_CBAJ_T0058714.1 MGP_CBAJ_G0026525.1 mouse_genomes_project 2 180424306 180430698 + MGP_CBAJ_P0058714 Kcnk15 protein_coding protein_coding MGP_CBAJ_T0007029.1 MGP_CBAJ_G0005762.1 mouse_genomes_project 2 4569362 4580657 + lincRNA lincRNA MGP_CBAJ_T0059164.1 MGP_CBAJ_G0026640.1 mouse_genomes_project 2 190638900 190668222 + MGP_CBAJ_P0059164 Rtfdc1 protein_coding protein_coding MGP_CBAJ_T0059165.1 MGP_CBAJ_G0026640.1 mouse_genomes_project 2 190638946 190664999 + Rtfdc1 protein_coding retained_intron MGP_CBAJ_T0059168.1 MGP_CBAJ_G0026640.1 mouse_genomes_project 2 190651319 190668222 + Rtfdc1 protein_coding processed_transcript MGP_CBAJ_T0007205.1 MGP_CBAJ_G0005901.1 mouse_genomes_project 2 127878091 127881993 - Gm29340 lincRNA lincRNA MGP_CBAJ_T0052363.1 MGP_CBAJ_G0025085.1 mouse_genomes_project 2 16840391 17030882 + MGP_CBAJ_P0052363 Mllt10 protein_coding protein_coding MGP_CBAJ_T0052364.1 MGP_CBAJ_G0025085.1 mouse_genomes_project 2 16849540 16924421 + Mllt10 protein_coding processed_transcript MGP_CBAJ_T0052365.1 MGP_CBAJ_G0025085.1 mouse_genomes_project 2 16849782 17030883 + MGP_CBAJ_P0052365 Mllt10 protein_coding protein_coding MGP_CBAJ_T0052366.1 MGP_CBAJ_G0025085.1 mouse_genomes_project 2 16849830 16929001 + Mllt10 protein_coding processed_transcript MGP_CBAJ_T0052367.1 MGP_CBAJ_G0025085.1 mouse_genomes_project 2 16849833 17028490 + MGP_CBAJ_P0052367 Mllt10 protein_coding protein_coding MGP_CBAJ_T0052368.1 MGP_CBAJ_G0025085.1 mouse_genomes_project 2 16849951 16925885 + Mllt10 protein_coding processed_transcript MGP_CBAJ_T0052369.1 MGP_CBAJ_G0025085.1 mouse_genomes_project 2 16849980 16908212 + Mllt10 protein_coding processed_transcript MGP_CBAJ_T0052370.1 MGP_CBAJ_G0025085.1 mouse_genomes_project 2 16849987 16850402 + Mllt10 protein_coding processed_transcript MGP_CBAJ_T0052371.1 MGP_CBAJ_G0025085.1 mouse_genomes_project 2 16886420 17024681 + MGP_CBAJ_P0052371 Mllt10 protein_coding protein_coding MGP_CBAJ_T0052372.1 MGP_CBAJ_G0025085.1 mouse_genomes_project 2 16925781 16971928 + Mllt10 protein_coding processed_transcript MGP_CBAJ_T0052373.1 MGP_CBAJ_G0025085.1 mouse_genomes_project 2 16986010 17002629 + Mllt10 protein_coding processed_transcript MGP_CBAJ_T0058142.1 MGP_CBAJ_G0026422.1 mouse_genomes_project 2 170299097 170323565 - MGP_CBAJ_P0058142 Eif2s2 protein_coding protein_coding MGP_CBAJ_T0058143.1 MGP_CBAJ_G0026422.1 mouse_genomes_project 2 170299105 170323412 - MGP_CBAJ_P0058143 Eif2s2 protein_coding protein_coding MGP_CBAJ_T0058144.1 MGP_CBAJ_G0026422.1 mouse_genomes_project 2 170299106 170323334 - MGP_CBAJ_P0058144 Eif2s2 protein_coding unknown_likely_coding MGP_CBAJ_T0058145.1 MGP_CBAJ_G0026422.1 mouse_genomes_project 2 170314663 170323461 - Eif2s2 protein_coding retained_intron MGP_CBAJ_T0058146.1 MGP_CBAJ_G0026422.1 mouse_genomes_project 2 170314695 170323425 - MGP_CBAJ_P0058146 Eif2s2 protein_coding protein_coding MGP_CBAJ_T0058147.1 MGP_CBAJ_G0026422.1 mouse_genomes_project 2 170314698 170323438 - Eif2s2 protein_coding retained_intron MGP_CBAJ_T0052290.1 MGP_CBAJ_G0025071.1 mouse_genomes_project 2 12148790 12386536 - MGP_CBAJ_P0052290 Hacd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052291.1 MGP_CBAJ_G0025071.1 mouse_genomes_project 2 12358819 12386520 - MGP_CBAJ_P0052291 Hacd1 protein_coding protein_coding MGP_CBAJ_T0052292.1 MGP_CBAJ_G0025071.1 mouse_genomes_project 2 12358890 12386635 - MGP_CBAJ_P0052292 Hacd1 protein_coding protein_coding MGP_CBAJ_T0052293.1 MGP_CBAJ_G0025071.1 mouse_genomes_project 2 12358912 12386367 - MGP_CBAJ_P0052293 Hacd1 protein_coding protein_coding MGP_CBAJ_T0055522.1 MGP_CBAJ_G0025783.1 mouse_genomes_project 2 96622222 96623158 - MGP_CBAJ_P0055522 Olfr1222 protein_coding protein_coding MGP_CBAJ_T0055523.1 MGP_CBAJ_G0025783.1 mouse_genomes_project 2 96622507 96623160 - MGP_CBAJ_P0055523 Olfr1222 protein_coding protein_coding MGP_CBAJ_T0003996.1 MGP_CBAJ_G0003541.1 mouse_genomes_project 2 133418289 133419227 - Gm14019 antisense antisense MGP_CBAJ_T0055368.1 MGP_CBAJ_G0025645.1 mouse_genomes_project 2 92313825 92314770 + MGP_CBAJ_P0055368 Olfr1009 protein_coding protein_coding MGP_CBAJ_T0013414.1 MGP_CBAJ_G0011526.1 mouse_genomes_project 2 76394144 76397250 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017494.1 MGP_CBAJ_G0015145.1 mouse_genomes_project 2 26051087 26052301 + Gm13568 processed_transcript processed_transcript MGP_CBAJ_T0053695.1 MGP_CBAJ_G0025312.1 mouse_genomes_project 2 32842969 32852559 - MGP_CBAJ_P0053695 Swi5 protein_coding protein_coding MGP_CBAJ_T0053696.1 MGP_CBAJ_G0025312.1 mouse_genomes_project 2 32842969 32847355 - MGP_CBAJ_P0053696 Swi5 protein_coding protein_coding MGP_CBAJ_T0053697.1 MGP_CBAJ_G0025312.1 mouse_genomes_project 2 32842969 32852496 - MGP_CBAJ_P0053697 Swi5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053698.1 MGP_CBAJ_G0025312.1 mouse_genomes_project 2 32842969 32852426 - MGP_CBAJ_P0053698 Swi5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053699.1 MGP_CBAJ_G0025312.1 mouse_genomes_project 2 32842969 32852566 - MGP_CBAJ_P0053699 Swi5 protein_coding protein_coding MGP_CBAJ_T0053700.1 MGP_CBAJ_G0025312.1 mouse_genomes_project 2 32843408 32852560 - MGP_CBAJ_P0053700 Swi5 protein_coding protein_coding MGP_CBAJ_T0053701.1 MGP_CBAJ_G0025312.1 mouse_genomes_project 2 32847771 32852522 - Swi5 protein_coding retained_intron MGP_CBAJ_T0052857.1 MGP_CBAJ_G0025171.1 mouse_genomes_project 2 25093396 25108204 - MGP_CBAJ_P0052857 Ccdc183 protein_coding protein_coding MGP_CBAJ_T0052858.1 MGP_CBAJ_G0025171.1 mouse_genomes_project 2 25093454 25108185 - Ccdc183 protein_coding processed_transcript MGP_CBAJ_T0058590.1 MGP_CBAJ_G0026497.1 mouse_genomes_project 2 176564951 176568392 - MGP_CBAJ_P0058590 Mafb protein_coding protein_coding MGP_CBAJ_T0057003.1 MGP_CBAJ_G0026130.1 mouse_genomes_project 2 137753725 137851386 - MGP_CBAJ_P0057003 Shc4 protein_coding protein_coding MGP_CBAJ_T0057004.1 MGP_CBAJ_G0026130.1 mouse_genomes_project 2 137755880 137796745 - MGP_CBAJ_P0057004 Shc4 protein_coding unknown_likely_coding MGP_CBAJ_T0057006.1 MGP_CBAJ_G0026130.1 mouse_genomes_project 2 137818006 137852147 - Shc4 protein_coding retained_intron MGP_CBAJ_T0013633.1 MGP_CBAJ_G0011745.1 mouse_genomes_project 2 165345740 165346948 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013669.1 MGP_CBAJ_G0011781.1 mouse_genomes_project 2 177590990 177591992 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013420.1 MGP_CBAJ_G0011532.1 mouse_genomes_project 2 78135089 78135386 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013227.1 MGP_CBAJ_G0011339.1 mouse_genomes_project 2 721794 722863 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055914.1 MGP_CBAJ_G0025877.1 mouse_genomes_project 2 101846572 102030058 - MGP_CBAJ_P0055914 Ext2 protein_coding protein_coding MGP_CBAJ_T0055915.1 MGP_CBAJ_G0025877.1 mouse_genomes_project 2 101887598 102030077 - MGP_CBAJ_P0055915 Ext2 protein_coding protein_coding MGP_CBAJ_T0055916.1 MGP_CBAJ_G0025877.1 mouse_genomes_project 2 101888080 101897071 - Ext2 protein_coding retained_intron MGP_CBAJ_T0055917.1 MGP_CBAJ_G0025877.1 mouse_genomes_project 2 101888094 102030054 - MGP_CBAJ_P0055917 Ext2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0055918.1 MGP_CBAJ_G0025877.1 mouse_genomes_project 2 101894916 101899273 - MGP_CBAJ_P0055918 Ext2 protein_coding protein_coding MGP_CBAJ_T0055919.1 MGP_CBAJ_G0025877.1 mouse_genomes_project 2 101895499 101896470 - MGP_CBAJ_P0055919 Ext2 protein_coding protein_coding MGP_CBAJ_T0055920.1 MGP_CBAJ_G0025877.1 mouse_genomes_project 2 101907928 102030058 - Ext2 protein_coding processed_transcript MGP_CBAJ_T0055921.1 MGP_CBAJ_G0025877.1 mouse_genomes_project 2 101961874 102003832 - Ext2 protein_coding retained_intron MGP_CBAJ_T0055922.1 MGP_CBAJ_G0025877.1 mouse_genomes_project 2 102013967 102030074 - MGP_CBAJ_P0055922 Ext2 protein_coding protein_coding MGP_CBAJ_T0055923.1 MGP_CBAJ_G0025877.1 mouse_genomes_project 2 102020971 102030054 - Ext2 protein_coding retained_intron MGP_CBAJ_T0055924.1 MGP_CBAJ_G0025877.1 mouse_genomes_project 2 102021396 102030057 - MGP_CBAJ_P0055924 Ext2 protein_coding protein_coding MGP_CBAJ_T0055925.1 MGP_CBAJ_G0025877.1 mouse_genomes_project 2 102021781 102030062 - Ext2 protein_coding processed_transcript MGP_CBAJ_T0053433.1 MGP_CBAJ_G0025275.1 mouse_genomes_project 2 30446578 30448682 - MGP_CBAJ_P0053433 Dolk protein_coding protein_coding MGP_CBAJ_T0001045.1 MGP_CBAJ_G0000977.1 mouse_genomes_project 2 72393119 72398005 + TEC TEC MGP_CBAJ_T0017476.1 MGP_CBAJ_G0015136.1 mouse_genomes_project 2 12406154 12409824 - Stamos processed_transcript antisense MGP_CBAJ_T0017477.1 MGP_CBAJ_G0015136.1 mouse_genomes_project 2 12408377 12409738 - Stamos processed_transcript retained_intron MGP_CBAJ_T0098312.1 MGP_CBAJ_G0036579.1 mouse_genomes_project 2 125606742 125607760 + Gm28492 sense_intronic sense_intronic MGP_CBAJ_T0058826.1 MGP_CBAJ_G0026571.1 mouse_genomes_project 2 181621069 181625255 + MGP_CBAJ_P0058826 Zswim1 protein_coding protein_coding MGP_CBAJ_T0058827.1 MGP_CBAJ_G0026571.1 mouse_genomes_project 2 181621396 181623652 + MGP_CBAJ_P0058827 Zswim1 protein_coding protein_coding MGP_CBAJ_T0052502.1 MGP_CBAJ_G0025107.1 mouse_genomes_project 2 22228791 22283245 + MGP_CBAJ_P0052502 Acbd5 protein_coding protein_coding MGP_CBAJ_T0052503.1 MGP_CBAJ_G0025107.1 mouse_genomes_project 2 22228824 22283245 + MGP_CBAJ_P0052503 Acbd5 protein_coding protein_coding MGP_CBAJ_T0052504.1 MGP_CBAJ_G0025107.1 mouse_genomes_project 2 22228858 22237948 + MGP_CBAJ_P0052504 Acbd5 protein_coding protein_coding MGP_CBAJ_T0052505.1 MGP_CBAJ_G0025107.1 mouse_genomes_project 2 22229691 22283243 + MGP_CBAJ_P0052505 Acbd5 protein_coding protein_coding MGP_CBAJ_T0052506.1 MGP_CBAJ_G0025107.1 mouse_genomes_project 2 22229695 22283245 + MGP_CBAJ_P0052506 Acbd5 protein_coding protein_coding MGP_CBAJ_T0052507.1 MGP_CBAJ_G0025107.1 mouse_genomes_project 2 22229781 22281252 + MGP_CBAJ_P0052507 Acbd5 protein_coding unknown_likely_coding MGP_CBAJ_T0052508.1 MGP_CBAJ_G0025107.1 mouse_genomes_project 2 22229950 22249953 + MGP_CBAJ_P0052508 Acbd5 protein_coding protein_coding MGP_CBAJ_T0013428.1 MGP_CBAJ_G0011540.1 mouse_genomes_project 2 81112851 81115504 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0054164.1 MGP_CBAJ_G0025407.1 mouse_genomes_project 2 38560040 38570990 - MGP_CBAJ_P0054164 Zbtb26 protein_coding protein_coding MGP_CBAJ_T0054165.1 MGP_CBAJ_G0025407.1 mouse_genomes_project 2 38562890 38570989 - MGP_CBAJ_P0054165 Zbtb26 protein_coding protein_coding MGP_CBAJ_T0054166.1 MGP_CBAJ_G0025407.1 mouse_genomes_project 2 38566347 38571004 - Zbtb26 protein_coding processed_transcript MGP_CBAJ_T0059371.1 MGP_CBAJ_G0026695.1 mouse_genomes_project 2 199675666 199695490 + MGP_CBAJ_P0059371 Slc17a9 protein_coding protein_coding MGP_CBAJ_T0059372.1 MGP_CBAJ_G0026695.1 mouse_genomes_project 2 199675782 199687491 + Slc17a9 protein_coding retained_intron MGP_CBAJ_T0059373.1 MGP_CBAJ_G0026695.1 mouse_genomes_project 2 199675803 199690323 + Slc17a9 protein_coding processed_transcript MGP_CBAJ_T0059374.1 MGP_CBAJ_G0026695.1 mouse_genomes_project 2 199689628 199694549 + Slc17a9 protein_coding processed_transcript MGP_CBAJ_T0059375.1 MGP_CBAJ_G0026695.1 mouse_genomes_project 2 199691484 199694627 + Slc17a9 protein_coding retained_intron MGP_CBAJ_T0055512.1 MGP_CBAJ_G0025775.1 mouse_genomes_project 2 96438310 96439246 - MGP_CBAJ_P0055512 Olfr1213 protein_coding protein_coding MGP_CBAJ_T0007261.1 MGP_CBAJ_G0005946.1 mouse_genomes_project 2 166680227 166682628 - 4930556L07Rik lincRNA lincRNA MGP_CBAJ_T0013326.1 MGP_CBAJ_G0011438.1 mouse_genomes_project 2 40565623 40565939 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055415.1 MGP_CBAJ_G0025690.1 mouse_genomes_project 2 93660967 93661974 - MGP_CBAJ_P0055415 protein_coding protein_coding MGP_CBAJ_T0007030.1 MGP_CBAJ_G0005763.1 mouse_genomes_project 2 5091913 5094259 + lincRNA lincRNA MGP_CBAJ_T0013376.1 MGP_CBAJ_G0011488.1 mouse_genomes_project 2 61066798 61066975 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0058848.1 MGP_CBAJ_G0026575.1 mouse_genomes_project 2 181640778 181662280 - MGP_CBAJ_P0058848 Pltp protein_coding protein_coding MGP_CBAJ_T0058849.1 MGP_CBAJ_G0026575.1 mouse_genomes_project 2 181640778 181662358 - MGP_CBAJ_P0058849 Pltp protein_coding protein_coding MGP_CBAJ_T0058850.1 MGP_CBAJ_G0026575.1 mouse_genomes_project 2 181640778 181662189 - MGP_CBAJ_P0058850 Pltp protein_coding protein_coding MGP_CBAJ_T0058851.1 MGP_CBAJ_G0026575.1 mouse_genomes_project 2 181647859 181661443 - Pltp protein_coding retained_intron MGP_CBAJ_T0058852.1 MGP_CBAJ_G0026575.1 mouse_genomes_project 2 181657120 181662273 - Pltp protein_coding processed_transcript MGP_CBAJ_T0058853.1 MGP_CBAJ_G0026575.1 mouse_genomes_project 2 181657257 181662267 - MGP_CBAJ_P0058853 Pltp protein_coding protein_coding MGP_CBAJ_T0058854.1 MGP_CBAJ_G0026575.1 mouse_genomes_project 2 181658968 181662277 - MGP_CBAJ_P0058854 Pltp protein_coding protein_coding MGP_CBAJ_T0007196.1 MGP_CBAJ_G0005897.1 mouse_genomes_project 2 126243353 126264731 - 3110099E03Rik lincRNA lincRNA MGP_CBAJ_T0007197.1 MGP_CBAJ_G0005897.1 mouse_genomes_project 2 126244871 126282010 - 3110099E03Rik lincRNA lincRNA MGP_CBAJ_T0007198.1 MGP_CBAJ_G0005897.1 mouse_genomes_project 2 126245578 126264737 - 3110099E03Rik lincRNA lincRNA MGP_CBAJ_T0056293.1 MGP_CBAJ_G0025975.1 mouse_genomes_project 2 122328315 122329254 - MGP_CBAJ_P0056293 protein_coding protein_coding MGP_CBAJ_T0055615.1 MGP_CBAJ_G0025832.1 mouse_genomes_project 2 98626112 98645768 + MGP_CBAJ_P0055615 Mtch2 protein_coding protein_coding MGP_CBAJ_T0055616.1 MGP_CBAJ_G0025832.1 mouse_genomes_project 2 98626135 98644346 + MGP_CBAJ_P0055616 Mtch2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0055617.1 MGP_CBAJ_G0025832.1 mouse_genomes_project 2 98626147 98627272 + Mtch2 protein_coding processed_transcript MGP_CBAJ_T0055618.1 MGP_CBAJ_G0025832.1 mouse_genomes_project 2 98626188 98645598 + MGP_CBAJ_P0055618 Mtch2 protein_coding protein_coding MGP_CBAJ_T0055619.1 MGP_CBAJ_G0025832.1 mouse_genomes_project 2 98626210 98630578 + Mtch2 protein_coding retained_intron MGP_CBAJ_T0055620.1 MGP_CBAJ_G0025832.1 mouse_genomes_project 2 98626230 98645598 + MGP_CBAJ_P0055620 Mtch2 protein_coding protein_coding MGP_CBAJ_T0055621.1 MGP_CBAJ_G0025832.1 mouse_genomes_project 2 98626244 98644349 + Mtch2 protein_coding processed_transcript MGP_CBAJ_T0055622.1 MGP_CBAJ_G0025832.1 mouse_genomes_project 2 98631148 98634705 + Mtch2 protein_coding retained_intron MGP_CBAJ_T0055623.1 MGP_CBAJ_G0025832.1 mouse_genomes_project 2 98631783 98635822 + Mtch2 protein_coding retained_intron MGP_CBAJ_T0055624.1 MGP_CBAJ_G0025832.1 mouse_genomes_project 2 98640197 98644429 + Mtch2 protein_coding retained_intron MGP_CBAJ_T0055625.1 MGP_CBAJ_G0025832.1 mouse_genomes_project 2 98642416 98644346 + Mtch2 protein_coding retained_intron MGP_CBAJ_T0057770.1 MGP_CBAJ_G0026306.1 mouse_genomes_project 2 162958433 162962156 - MGP_CBAJ_P0057770 Thbd protein_coding protein_coding MGP_CBAJ_T0055190.1 MGP_CBAJ_G0025594.1 mouse_genomes_project 2 85738995 86068733 - MGP_CBAJ_P0055190 Pde1a protein_coding protein_coding MGP_CBAJ_T0055191.1 MGP_CBAJ_G0025594.1 mouse_genomes_project 2 85760345 85809381 - MGP_CBAJ_P0055191 Pde1a protein_coding protein_coding MGP_CBAJ_T0055192.1 MGP_CBAJ_G0025594.1 mouse_genomes_project 2 85760345 85809381 - MGP_CBAJ_P0055192 Pde1a protein_coding protein_coding MGP_CBAJ_T0055193.1 MGP_CBAJ_G0025594.1 mouse_genomes_project 2 85766354 85828466 - MGP_CBAJ_P0055193 Pde1a protein_coding protein_coding MGP_CBAJ_T0055194.1 MGP_CBAJ_G0025594.1 mouse_genomes_project 2 85806907 85957881 - Pde1a protein_coding processed_transcript MGP_CBAJ_T0055195.1 MGP_CBAJ_G0025594.1 mouse_genomes_project 2 85814201 86069357 - Pde1a protein_coding processed_transcript MGP_CBAJ_T0013397.1 MGP_CBAJ_G0011509.1 mouse_genomes_project 2 69093174 69093757 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057851.1 MGP_CBAJ_G0026334.1 mouse_genomes_project 2 165890583 165904755 - MGP_CBAJ_P0057851 protein_coding protein_coding MGP_CBAJ_T0057852.1 MGP_CBAJ_G0026334.1 mouse_genomes_project 2 165892124 165904719 - protein_coding processed_transcript MGP_CBAJ_T0054612.1 MGP_CBAJ_G0025480.1 mouse_genomes_project 2 65931682 66245882 + MGP_CBAJ_P0054612 Slc4a10 protein_coding protein_coding MGP_CBAJ_T0054613.1 MGP_CBAJ_G0025480.1 mouse_genomes_project 2 65931805 66243975 + Slc4a10 protein_coding processed_transcript MGP_CBAJ_T0054614.1 MGP_CBAJ_G0025480.1 mouse_genomes_project 2 65931805 66245882 + MGP_CBAJ_P0054614 Slc4a10 protein_coding protein_coding MGP_CBAJ_T0054615.1 MGP_CBAJ_G0025480.1 mouse_genomes_project 2 65931865 66245882 + MGP_CBAJ_P0054615 Slc4a10 protein_coding protein_coding MGP_CBAJ_T0054616.1 MGP_CBAJ_G0025480.1 mouse_genomes_project 2 66054789 66065182 + Slc4a10 protein_coding processed_transcript MGP_CBAJ_T0054617.1 MGP_CBAJ_G0025480.1 mouse_genomes_project 2 66180570 66182306 + Slc4a10 protein_coding processed_transcript MGP_CBAJ_T0054618.1 MGP_CBAJ_G0025480.1 mouse_genomes_project 2 66234072 66244529 + Slc4a10 protein_coding processed_transcript MGP_CBAJ_T0057121.1 MGP_CBAJ_G0026155.1 mouse_genomes_project 2 139704768 139706945 + MGP_CBAJ_P0057121 Dusp2 protein_coding protein_coding MGP_CBAJ_T0057122.1 MGP_CBAJ_G0026155.1 mouse_genomes_project 2 139705219 139706072 + Dusp2 protein_coding retained_intron MGP_CBAJ_T0101425.1 MGP_CBAJ_G0026716.1 mouse_genomes_project 2 200411414 200414743 + unitary_pseudogene processed_transcript MGP_CBAJ_T0101426.1 MGP_CBAJ_G0026716.1 mouse_genomes_project 2 200411575 200414356 + unitary_pseudogene unitary_pseudogene MGP_CBAJ_T0003945.1 MGP_CBAJ_G0003509.1 mouse_genomes_project 2 80072711 80085735 - Hoxd3os1 antisense antisense MGP_CBAJ_T0003946.1 MGP_CBAJ_G0003509.1 mouse_genomes_project 2 80079481 80086207 - Hoxd3os1 antisense antisense MGP_CBAJ_T0003947.1 MGP_CBAJ_G0003509.1 mouse_genomes_project 2 80079631 80089673 - Hoxd3os1 antisense antisense MGP_CBAJ_T0003948.1 MGP_CBAJ_G0003509.1 mouse_genomes_project 2 80086806 80089807 - Hoxd3os1 antisense antisense MGP_CBAJ_T0054965.1 MGP_CBAJ_G0025547.1 mouse_genomes_project 2 78504536 78510083 + MGP_CBAJ_P0054965 Sp9 protein_coding protein_coding MGP_CBAJ_T0054966.1 MGP_CBAJ_G0025547.1 mouse_genomes_project 2 78504577 78517298 + Sp9 protein_coding processed_transcript MGP_CBAJ_T0052985.1 MGP_CBAJ_G0025199.1 mouse_genomes_project 2 25973563 25981347 + MGP_CBAJ_P0052985 Pmpca protein_coding protein_coding MGP_CBAJ_T0052986.1 MGP_CBAJ_G0025199.1 mouse_genomes_project 2 25973572 25978166 + MGP_CBAJ_P0052986 Pmpca protein_coding protein_coding MGP_CBAJ_T0052987.1 MGP_CBAJ_G0025199.1 mouse_genomes_project 2 25973578 25974520 + Pmpca protein_coding processed_transcript MGP_CBAJ_T0052988.1 MGP_CBAJ_G0025199.1 mouse_genomes_project 2 25973578 25974427 + Pmpca protein_coding processed_transcript MGP_CBAJ_T0052989.1 MGP_CBAJ_G0025199.1 mouse_genomes_project 2 25973580 25976191 + Pmpca protein_coding processed_transcript MGP_CBAJ_T0052990.1 MGP_CBAJ_G0025199.1 mouse_genomes_project 2 25975151 25976623 + Pmpca protein_coding processed_transcript MGP_CBAJ_T0013264.1 MGP_CBAJ_G0011376.1 mouse_genomes_project 2 17075100 17075579 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013486.1 MGP_CBAJ_G0011598.1 mouse_genomes_project 2 100255891 100256224 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0052531.1 MGP_CBAJ_G0025115.1 mouse_genomes_project 2 23494537 23502878 + MGP_CBAJ_P0052531 Il1f9 protein_coding protein_coding MGP_CBAJ_T0013323.1 MGP_CBAJ_G0011435.1 mouse_genomes_project 2 40222275 40225166 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0058516.1 MGP_CBAJ_G0026480.1 mouse_genomes_project 2 173821756 173859428 + MGP_CBAJ_P0058516 Vstm2l protein_coding protein_coding MGP_CBAJ_T0058309.1 MGP_CBAJ_G0026450.1 mouse_genomes_project 2 171679890 171729672 - MGP_CBAJ_P0058309 Cpne1 protein_coding protein_coding MGP_CBAJ_T0058310.1 MGP_CBAJ_G0026450.1 mouse_genomes_project 2 171679893 171729625 - Cpne1 protein_coding retained_intron MGP_CBAJ_T0058311.1 MGP_CBAJ_G0026450.1 mouse_genomes_project 2 171679893 171729676 - MGP_CBAJ_P0058311 Cpne1 protein_coding protein_coding MGP_CBAJ_T0058314.1 MGP_CBAJ_G0026450.1 mouse_genomes_project 2 171679895 171729680 - MGP_CBAJ_P0058314 Cpne1 protein_coding protein_coding MGP_CBAJ_T0058315.1 MGP_CBAJ_G0026450.1 mouse_genomes_project 2 171681386 171682349 - Cpne1 protein_coding processed_transcript MGP_CBAJ_T0058316.1 MGP_CBAJ_G0026450.1 mouse_genomes_project 2 171681408 171729638 - MGP_CBAJ_P0058316 Cpne1 protein_coding protein_coding MGP_CBAJ_T0058317.1 MGP_CBAJ_G0026450.1 mouse_genomes_project 2 171681442 171684306 - MGP_CBAJ_P0058317 Cpne1 protein_coding protein_coding MGP_CBAJ_T0058318.1 MGP_CBAJ_G0026450.1 mouse_genomes_project 2 171681447 171684331 - Cpne1 protein_coding retained_intron MGP_CBAJ_T0058319.1 MGP_CBAJ_G0026450.1 mouse_genomes_project 2 171681561 171729641 - MGP_CBAJ_P0058319 Cpne1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058320.1 MGP_CBAJ_G0026450.1 mouse_genomes_project 2 171681566 171686214 - MGP_CBAJ_P0058320 Cpne1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058321.1 MGP_CBAJ_G0026450.1 mouse_genomes_project 2 171682151 171684606 - Cpne1 protein_coding retained_intron MGP_CBAJ_T0058322.1 MGP_CBAJ_G0026450.1 mouse_genomes_project 2 171682254 171729702 - MGP_CBAJ_P0058322 Cpne1 protein_coding protein_coding MGP_CBAJ_T0058323.1 MGP_CBAJ_G0026450.1 mouse_genomes_project 2 171685452 171729646 - MGP_CBAJ_P0058323 Cpne1 protein_coding protein_coding MGP_CBAJ_T0058324.1 MGP_CBAJ_G0026450.1 mouse_genomes_project 2 171685473 171686645 - Cpne1 protein_coding retained_intron MGP_CBAJ_T0058325.1 MGP_CBAJ_G0026450.1 mouse_genomes_project 2 171686220 171729696 - MGP_CBAJ_P0058325 Cpne1 protein_coding protein_coding MGP_CBAJ_T0058326.1 MGP_CBAJ_G0026450.1 mouse_genomes_project 2 171686627 171729646 - MGP_CBAJ_P0058326 Cpne1 protein_coding protein_coding MGP_CBAJ_T0058327.1 MGP_CBAJ_G0026450.1 mouse_genomes_project 2 171686953 171729600 - MGP_CBAJ_P0058327 Cpne1 protein_coding protein_coding MGP_CBAJ_T0058328.1 MGP_CBAJ_G0026450.1 mouse_genomes_project 2 171686964 171710722 - MGP_CBAJ_P0058328 Cpne1 protein_coding protein_coding MGP_CBAJ_T0001036.1 MGP_CBAJ_G0000968.1 mouse_genomes_project 2 39192838 39198171 + TEC TEC MGP_CBAJ_T0055441.1 MGP_CBAJ_G0025716.1 mouse_genomes_project 2 94458925 94459879 + MGP_CBAJ_P0055441 Olfr1124 protein_coding protein_coding MGP_CBAJ_T0100408.1 MGP_CBAJ_G0038663.1 mouse_genomes_project 2 166168407 166168543 - snoRNA snoRNA MGP_CBAJ_T0056500.1 MGP_CBAJ_G0026031.1 mouse_genomes_project 2 130347701 130350759 + MGP_CBAJ_P0056500 Gm14137 protein_coding protein_coding MGP_CBAJ_T0004088.1 MGP_CBAJ_G0003609.1 mouse_genomes_project 2 181728786 181737204 + Zfp335os antisense antisense MGP_CBAJ_T0004089.1 MGP_CBAJ_G0003609.1 mouse_genomes_project 2 181731355 181736814 + Zfp335os antisense antisense MGP_CBAJ_T0098017.1 MGP_CBAJ_G0036290.1 mouse_genomes_project 2 101537088 101537191 - Gm23380 rRNA rRNA MGP_CBAJ_T0013419.1 MGP_CBAJ_G0011531.1 mouse_genomes_project 2 77761860 77763017 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0059554.1 MGP_CBAJ_G0026724.1 mouse_genomes_project 2 200650748 200654743 - MGP_CBAJ_P0059554 Samd10 protein_coding protein_coding MGP_CBAJ_T0059555.1 MGP_CBAJ_G0026724.1 mouse_genomes_project 2 200650751 200654729 - MGP_CBAJ_P0059555 Samd10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059556.1 MGP_CBAJ_G0026724.1 mouse_genomes_project 2 200652322 200653137 - Samd10 protein_coding retained_intron MGP_CBAJ_T0057811.1 MGP_CBAJ_G0026324.1 mouse_genomes_project 2 165105836 165106264 + MGP_CBAJ_P0057811 Gm10130 protein_coding protein_coding MGP_CBAJ_T0057336.1 MGP_CBAJ_G0026214.1 mouse_genomes_project 2 143422059 143426513 - Slc4a11 protein_coding retained_intron MGP_CBAJ_T0057337.1 MGP_CBAJ_G0026214.1 mouse_genomes_project 2 143422059 143443911 - MGP_CBAJ_P0057337 Slc4a11 protein_coding protein_coding MGP_CBAJ_T0057338.1 MGP_CBAJ_G0026214.1 mouse_genomes_project 2 143424522 143443861 - Slc4a11 protein_coding retained_intron MGP_CBAJ_T0057339.1 MGP_CBAJ_G0026214.1 mouse_genomes_project 2 143431757 143432907 - Slc4a11 protein_coding retained_intron MGP_CBAJ_T0057340.1 MGP_CBAJ_G0026214.1 mouse_genomes_project 2 143432473 143443861 - MGP_CBAJ_P0057340 Slc4a11 protein_coding protein_coding MGP_CBAJ_T0017540.1 MGP_CBAJ_G0015178.1 mouse_genomes_project 2 94075517 94079710 - Gm13734 processed_transcript processed_transcript MGP_CBAJ_T0053124.1 MGP_CBAJ_G0025224.1 mouse_genomes_project 2 26920403 26967836 - Sardh protein_coding processed_transcript MGP_CBAJ_T0053125.1 MGP_CBAJ_G0025224.1 mouse_genomes_project 2 26920403 26982401 - MGP_CBAJ_P0053125 Sardh protein_coding protein_coding MGP_CBAJ_T0053126.1 MGP_CBAJ_G0025224.1 mouse_genomes_project 2 26921207 26924271 - Sardh protein_coding retained_intron MGP_CBAJ_T0053127.1 MGP_CBAJ_G0025224.1 mouse_genomes_project 2 26921392 26941942 - Sardh protein_coding processed_transcript MGP_CBAJ_T0053128.1 MGP_CBAJ_G0025224.1 mouse_genomes_project 2 26928718 26954138 - Sardh protein_coding retained_intron MGP_CBAJ_T0053129.1 MGP_CBAJ_G0025224.1 mouse_genomes_project 2 26943048 26947625 - Sardh protein_coding processed_transcript MGP_CBAJ_T0053130.1 MGP_CBAJ_G0025224.1 mouse_genomes_project 2 26943084 26960349 - Sardh protein_coding retained_intron MGP_CBAJ_T0053131.1 MGP_CBAJ_G0025224.1 mouse_genomes_project 2 26976607 26981983 - MGP_CBAJ_P0053131 Sardh protein_coding protein_coding MGP_CBAJ_T0053132.1 MGP_CBAJ_G0025224.1 mouse_genomes_project 2 26976625 26983472 - MGP_CBAJ_P0053132 Sardh protein_coding protein_coding MGP_CBAJ_T0053133.1 MGP_CBAJ_G0025224.1 mouse_genomes_project 2 26979424 26982549 - MGP_CBAJ_P0053133 Sardh protein_coding protein_coding MGP_CBAJ_T0053950.1 MGP_CBAJ_G0025350.1 mouse_genomes_project 2 35277122 35379743 + MGP_CBAJ_P0053950 Mapkap1 protein_coding protein_coding MGP_CBAJ_T0053951.1 MGP_CBAJ_G0025350.1 mouse_genomes_project 2 35277220 35307917 + MGP_CBAJ_P0053951 Mapkap1 protein_coding protein_coding MGP_CBAJ_T0053952.1 MGP_CBAJ_G0025350.1 mouse_genomes_project 2 35277223 35358935 + Mapkap1 protein_coding processed_transcript MGP_CBAJ_T0053953.1 MGP_CBAJ_G0025350.1 mouse_genomes_project 2 35277228 35514024 + MGP_CBAJ_P0053953 Mapkap1 protein_coding protein_coding MGP_CBAJ_T0053954.1 MGP_CBAJ_G0025350.1 mouse_genomes_project 2 35277229 35514040 + MGP_CBAJ_P0053954 Mapkap1 protein_coding protein_coding MGP_CBAJ_T0053955.1 MGP_CBAJ_G0025350.1 mouse_genomes_project 2 35316676 35415666 + Mapkap1 protein_coding processed_transcript MGP_CBAJ_T0053956.1 MGP_CBAJ_G0025350.1 mouse_genomes_project 2 35324527 35379900 + MGP_CBAJ_P0053956 Mapkap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053957.1 MGP_CBAJ_G0025350.1 mouse_genomes_project 2 35510057 35514395 + Mapkap1 protein_coding processed_transcript MGP_CBAJ_T0054128.1 MGP_CBAJ_G0025384.1 mouse_genomes_project 2 37797901 37798840 + MGP_CBAJ_P0054128 Olfr347 protein_coding protein_coding MGP_CBAJ_T0010208.1 MGP_CBAJ_G0008346.1 mouse_genomes_project 2 2906548 2906628 + Gm27506 miRNA miRNA MGP_CBAJ_T0007103.1 MGP_CBAJ_G0005819.1 mouse_genomes_project 2 54410967 54494732 - Gm13490 lincRNA lincRNA MGP_CBAJ_T0010293.1 MGP_CBAJ_G0008431.1 mouse_genomes_project 2 72138592 72138652 + Mir7224 miRNA miRNA MGP_CBAJ_T0058295.1 MGP_CBAJ_G0026448.1 mouse_genomes_project 2 171608936 171646388 - MGP_CBAJ_P0058295 Fer1l4 protein_coding protein_coding MGP_CBAJ_T0058296.1 MGP_CBAJ_G0026448.1 mouse_genomes_project 2 171608937 171614684 - Fer1l4 protein_coding retained_intron MGP_CBAJ_T0058297.1 MGP_CBAJ_G0026448.1 mouse_genomes_project 2 171608938 171630172 - Fer1l4 protein_coding retained_intron MGP_CBAJ_T0058298.1 MGP_CBAJ_G0026448.1 mouse_genomes_project 2 171619759 171621814 - MGP_CBAJ_P0058298 Fer1l4 protein_coding protein_coding MGP_CBAJ_T0058299.1 MGP_CBAJ_G0026448.1 mouse_genomes_project 2 171619908 171621816 - Fer1l4 protein_coding retained_intron MGP_CBAJ_T0058300.1 MGP_CBAJ_G0026448.1 mouse_genomes_project 2 171628546 171630907 - MGP_CBAJ_P0058300 Fer1l4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0004066.1 MGP_CBAJ_G0003594.1 mouse_genomes_project 2 173409410 173410615 - Gm14286 antisense antisense MGP_CBAJ_T0059027.1 MGP_CBAJ_G0026605.1 mouse_genomes_project 2 184449023 184507802 - MGP_CBAJ_P0059027 Ptgis protein_coding protein_coding MGP_CBAJ_T0059028.1 MGP_CBAJ_G0026605.1 mouse_genomes_project 2 184467220 184507817 - MGP_CBAJ_P0059028 Ptgis protein_coding protein_coding MGP_CBAJ_T0059029.1 MGP_CBAJ_G0026605.1 mouse_genomes_project 2 184470835 184472730 - Ptgis protein_coding retained_intron MGP_CBAJ_T0055470.1 MGP_CBAJ_G0025735.1 mouse_genomes_project 2 94903403 94904381 + MGP_CBAJ_P0055470 Olfr1145 protein_coding protein_coding MGP_CBAJ_T0055354.1 MGP_CBAJ_G0025633.1 mouse_genomes_project 2 91644353 91648055 + MGP_CBAJ_P0055354 Aplnr protein_coding protein_coding MGP_CBAJ_T0055355.1 MGP_CBAJ_G0025633.1 mouse_genomes_project 2 91645521 91648053 + MGP_CBAJ_P0055355 Aplnr protein_coding protein_coding MGP_CBAJ_T0056050.1 MGP_CBAJ_G0025902.1 mouse_genomes_project 2 112657041 112699406 + MGP_CBAJ_P0056050 Elf5 protein_coding protein_coding MGP_CBAJ_T0056051.1 MGP_CBAJ_G0025902.1 mouse_genomes_project 2 112657066 112693692 + Elf5 protein_coding retained_intron MGP_CBAJ_T0056052.1 MGP_CBAJ_G0025902.1 mouse_genomes_project 2 112669417 112699409 + MGP_CBAJ_P0056052 Elf5 protein_coding protein_coding MGP_CBAJ_T0056053.1 MGP_CBAJ_G0025902.1 mouse_genomes_project 2 112669481 112698261 + MGP_CBAJ_P0056053 Elf5 protein_coding protein_coding MGP_CBAJ_T0056054.1 MGP_CBAJ_G0025902.1 mouse_genomes_project 2 112670182 112697451 + MGP_CBAJ_P0056054 Elf5 protein_coding protein_coding MGP_CBAJ_T0056055.1 MGP_CBAJ_G0025902.1 mouse_genomes_project 2 112695284 112697435 + Elf5 protein_coding processed_transcript MGP_CBAJ_T0056056.1 MGP_CBAJ_G0025902.1 mouse_genomes_project 2 112697157 112698243 + Elf5 protein_coding processed_transcript MGP_CBAJ_T0054990.1 MGP_CBAJ_G0025552.1 mouse_genomes_project 2 78816746 78839710 - MGP_CBAJ_P0054990 Chrna1 protein_coding protein_coding MGP_CBAJ_T0055071.1 MGP_CBAJ_G0025576.1 mouse_genomes_project 2 81950489 81957069 - MGP_CBAJ_P0055071 Cyct protein_coding protein_coding MGP_CBAJ_T0013492.1 MGP_CBAJ_G0011604.1 mouse_genomes_project 2 102651972 102652569 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0054381.1 MGP_CBAJ_G0025439.1 mouse_genomes_project 2 53809606 53828113 - MGP_CBAJ_P0054381 Rnd3 protein_coding protein_coding MGP_CBAJ_T0054382.1 MGP_CBAJ_G0025439.1 mouse_genomes_project 2 53816307 53828327 - Rnd3 protein_coding retained_intron MGP_CBAJ_T0098022.1 MGP_CBAJ_G0036295.1 mouse_genomes_project 2 130874759 130874878 + n-R5s204 rRNA rRNA MGP_CBAJ_T0003898.1 MGP_CBAJ_G0003476.1 mouse_genomes_project 2 55253786 55256123 + antisense antisense MGP_CBAJ_T0059198.1 MGP_CBAJ_G0026651.1 mouse_genomes_project 2 191553312 191610020 - MGP_CBAJ_P0059198 Pmepa1 protein_coding protein_coding MGP_CBAJ_T0059199.1 MGP_CBAJ_G0026651.1 mouse_genomes_project 2 191556900 191609676 - MGP_CBAJ_P0059199 Pmepa1 protein_coding protein_coding MGP_CBAJ_T0059200.1 MGP_CBAJ_G0026651.1 mouse_genomes_project 2 191557065 191566504 - Pmepa1 protein_coding retained_intron MGP_CBAJ_T0004101.1 MGP_CBAJ_G0003621.1 mouse_genomes_project 2 190167463 190171064 + Gm14271 antisense antisense MGP_CBAJ_T0007286.1 MGP_CBAJ_G0005968.1 mouse_genomes_project 2 181276959 181289692 + Gm14317 lincRNA lincRNA MGP_CBAJ_T0055553.1 MGP_CBAJ_G0025805.1 mouse_genomes_project 2 97225189 97226306 - MGP_CBAJ_P0055553 Olfr1249 protein_coding protein_coding MGP_CBAJ_T0013583.1 MGP_CBAJ_G0011695.1 mouse_genomes_project 2 144757725 144759019 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013324.1 MGP_CBAJ_G0011436.1 mouse_genomes_project 2 40473461 40474187 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001023.1 MGP_CBAJ_G0000955.1 mouse_genomes_project 2 23542713 23544485 + TEC TEC MGP_CBAJ_T0003958.1 MGP_CBAJ_G0003517.1 mouse_genomes_project 2 96399591 96406243 - Gm13763 antisense antisense MGP_CBAJ_T0013228.1 MGP_CBAJ_G0011340.1 mouse_genomes_project 2 1119318 1120615 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013451.1 MGP_CBAJ_G0011563.1 mouse_genomes_project 2 88782343 88782872 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013408.1 MGP_CBAJ_G0011520.1 mouse_genomes_project 2 73977976 73978478 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055291.1 MGP_CBAJ_G0025616.1 mouse_genomes_project 2 91157488 91167260 + MGP_CBAJ_P0055291 Med19 protein_coding protein_coding MGP_CBAJ_T0055292.1 MGP_CBAJ_G0025616.1 mouse_genomes_project 2 91164677 91166544 + Med19 protein_coding processed_transcript MGP_CBAJ_T0053529.1 MGP_CBAJ_G0025286.1 mouse_genomes_project 2 31104227 31109383 - Asb6 protein_coding retained_intron MGP_CBAJ_T0053530.1 MGP_CBAJ_G0025286.1 mouse_genomes_project 2 31104227 31111462 - MGP_CBAJ_P0053530 Asb6 protein_coding protein_coding MGP_CBAJ_T0053531.1 MGP_CBAJ_G0025286.1 mouse_genomes_project 2 31105600 31109394 - MGP_CBAJ_P0053531 Asb6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053532.1 MGP_CBAJ_G0025286.1 mouse_genomes_project 2 31106284 31109420 - Asb6 protein_coding retained_intron MGP_CBAJ_T0053533.1 MGP_CBAJ_G0025286.1 mouse_genomes_project 2 31106588 31108623 - Asb6 protein_coding retained_intron MGP_CBAJ_T0057772.1 MGP_CBAJ_G0026308.1 mouse_genomes_project 2 163258893 163262320 + MGP_CBAJ_P0057772 Nxt1 protein_coding protein_coding MGP_CBAJ_T0057773.1 MGP_CBAJ_G0026308.1 mouse_genomes_project 2 163258918 163262320 + MGP_CBAJ_P0057773 Nxt1 protein_coding protein_coding MGP_CBAJ_T0057024.1 MGP_CBAJ_G0026135.1 mouse_genomes_project 2 138145814 138354442 - MGP_CBAJ_P0057024 Fam227b protein_coding protein_coding MGP_CBAJ_T0057025.1 MGP_CBAJ_G0026135.1 mouse_genomes_project 2 138145959 138354422 - MGP_CBAJ_P0057025 Fam227b protein_coding protein_coding MGP_CBAJ_T0057026.1 MGP_CBAJ_G0026135.1 mouse_genomes_project 2 138145959 138347343 - MGP_CBAJ_P0057026 Fam227b protein_coding protein_coding MGP_CBAJ_T0057027.1 MGP_CBAJ_G0026135.1 mouse_genomes_project 2 138162824 138354442 - Fam227b protein_coding retained_intron MGP_CBAJ_T0052599.1 MGP_CBAJ_G0025126.1 mouse_genomes_project 2 24333972 24343029 + MGP_CBAJ_P0052599 Zmynd19 protein_coding protein_coding MGP_CBAJ_T0007144.1 MGP_CBAJ_G0005854.1 mouse_genomes_project 2 82987687 82989960 + Gm13943 lincRNA lincRNA MGP_CBAJ_T0010266.1 MGP_CBAJ_G0008404.1 mouse_genomes_project 2 29927376 29927473 - Mir219a-2 miRNA miRNA MGP_CBAJ_T0098303.1 MGP_CBAJ_G0036570.1 mouse_genomes_project 2 1184305 1187351 + Gm38085 sense_intronic sense_intronic MGP_CBAJ_T0055517.1 MGP_CBAJ_G0025778.1 mouse_genomes_project 2 96475815 96476754 - MGP_CBAJ_P0055517 Olfr1215 protein_coding protein_coding MGP_CBAJ_T0000993.1 MGP_CBAJ_G0000925.1 mouse_genomes_project 2 9197586 9200151 + TEC TEC MGP_CBAJ_T0054125.1 MGP_CBAJ_G0025381.1 mouse_genomes_project 2 37628312 37629242 + MGP_CBAJ_P0054125 Olfr344 protein_coding protein_coding MGP_CBAJ_T0058451.1 MGP_CBAJ_G0026468.1 mouse_genomes_project 2 172804072 172875846 - MGP_CBAJ_P0058451 Soga1 protein_coding protein_coding MGP_CBAJ_T0058452.1 MGP_CBAJ_G0026468.1 mouse_genomes_project 2 172809131 172817748 - Soga1 protein_coding processed_transcript MGP_CBAJ_T0058453.1 MGP_CBAJ_G0026468.1 mouse_genomes_project 2 172829052 172834696 - Soga1 protein_coding processed_transcript MGP_CBAJ_T0056271.1 MGP_CBAJ_G0025953.1 mouse_genomes_project 2 121421039 121422046 + MGP_CBAJ_P0056271 Olfr1278 protein_coding protein_coding MGP_CBAJ_T0007291.1 MGP_CBAJ_G0005973.1 mouse_genomes_project 2 183299258 183300656 - Gm11467 lincRNA lincRNA MGP_CBAJ_T0013617.1 MGP_CBAJ_G0011729.1 mouse_genomes_project 2 160103826 160104441 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0057149.1 MGP_CBAJ_G0026163.1 mouse_genomes_project 2 139981618 140001295 + MGP_CBAJ_P0057149 Mrps5 protein_coding protein_coding MGP_CBAJ_T0057150.1 MGP_CBAJ_G0026163.1 mouse_genomes_project 2 139981815 139998983 + Mrps5 protein_coding retained_intron MGP_CBAJ_T0057151.1 MGP_CBAJ_G0026163.1 mouse_genomes_project 2 139981815 139990498 + Mrps5 protein_coding retained_intron MGP_CBAJ_T0057152.1 MGP_CBAJ_G0026163.1 mouse_genomes_project 2 139984821 139990120 + MGP_CBAJ_P0057152 Mrps5 protein_coding protein_coding MGP_CBAJ_T0057153.1 MGP_CBAJ_G0026163.1 mouse_genomes_project 2 139990097 139992814 + Mrps5 protein_coding retained_intron MGP_CBAJ_T0057154.1 MGP_CBAJ_G0026163.1 mouse_genomes_project 2 139994265 139998313 + Mrps5 protein_coding retained_intron MGP_CBAJ_T0057155.1 MGP_CBAJ_G0026163.1 mouse_genomes_project 2 139994470 139995683 + Mrps5 protein_coding retained_intron MGP_CBAJ_T0056635.1 MGP_CBAJ_G0026061.1 mouse_genomes_project 2 131687808 131737643 - MGP_CBAJ_P0056635 Tmem87a protein_coding protein_coding MGP_CBAJ_T0056636.1 MGP_CBAJ_G0026061.1 mouse_genomes_project 2 131687808 131737663 - MGP_CBAJ_P0056636 Tmem87a protein_coding protein_coding MGP_CBAJ_T0056637.1 MGP_CBAJ_G0026061.1 mouse_genomes_project 2 131687812 131737669 - Tmem87a protein_coding processed_transcript MGP_CBAJ_T0056638.1 MGP_CBAJ_G0026061.1 mouse_genomes_project 2 131688447 131737651 - Tmem87a protein_coding processed_transcript MGP_CBAJ_T0056639.1 MGP_CBAJ_G0026061.1 mouse_genomes_project 2 131695767 131737652 - MGP_CBAJ_P0056639 Tmem87a protein_coding protein_coding MGP_CBAJ_T0056640.1 MGP_CBAJ_G0026061.1 mouse_genomes_project 2 131712558 131737687 - Tmem87a protein_coding processed_transcript MGP_CBAJ_T0056641.1 MGP_CBAJ_G0026061.1 mouse_genomes_project 2 131713072 131737655 - Tmem87a protein_coding retained_intron MGP_CBAJ_T0013521.1 MGP_CBAJ_G0011633.1 mouse_genomes_project 2 113923932 113924955 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010284.1 MGP_CBAJ_G0008422.1 mouse_genomes_project 2 39870596 39870722 - Gm27634 miRNA miRNA MGP_CBAJ_T0013610.1 MGP_CBAJ_G0011722.1 mouse_genomes_project 2 157932399 157932732 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055030.1 MGP_CBAJ_G0025558.1 mouse_genomes_project 2 80037782 80041072 + MGP_CBAJ_P0055030 Hoxd13 protein_coding protein_coding MGP_CBAJ_T0004057.1 MGP_CBAJ_G0003586.1 mouse_genomes_project 2 170020923 170023605 - Gm14198 antisense antisense MGP_CBAJ_T0057998.1 MGP_CBAJ_G0026382.1 mouse_genomes_project 2 168213073 168232549 + Ccm2l protein_coding processed_transcript MGP_CBAJ_T0057999.1 MGP_CBAJ_G0026382.1 mouse_genomes_project 2 168213102 168218215 + Ccm2l protein_coding processed_transcript MGP_CBAJ_T0058000.1 MGP_CBAJ_G0026382.1 mouse_genomes_project 2 168213116 168218026 + MGP_CBAJ_P0058000 Ccm2l protein_coding protein_coding MGP_CBAJ_T0058001.1 MGP_CBAJ_G0026382.1 mouse_genomes_project 2 168213125 168232013 + MGP_CBAJ_P0058001 Ccm2l protein_coding protein_coding MGP_CBAJ_T0101086.1 MGP_CBAJ_G0039296.1 mouse_genomes_project 2 122317404 122318529 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0056268.1 MGP_CBAJ_G0025950.1 mouse_genomes_project 2 121354198 121355137 - MGP_CBAJ_P0056268 Olfr1275 protein_coding protein_coding MGP_CBAJ_T0056903.1 MGP_CBAJ_G0026101.1 mouse_genomes_project 2 133600707 133644862 + MGP_CBAJ_P0056903 Eif3j2 protein_coding protein_coding MGP_CBAJ_T0057821.1 MGP_CBAJ_G0026328.1 mouse_genomes_project 2 165521764 165530423 - MGP_CBAJ_P0057821 Vsx1 protein_coding protein_coding MGP_CBAJ_T0058536.1 MGP_CBAJ_G0026485.1 mouse_genomes_project 2 174215447 174255415 + MGP_CBAJ_P0058536 Bpi protein_coding protein_coding MGP_CBAJ_T0058537.1 MGP_CBAJ_G0026485.1 mouse_genomes_project 2 174215447 174255279 + MGP_CBAJ_P0058537 Bpi protein_coding protein_coding MGP_CBAJ_T0058538.1 MGP_CBAJ_G0026485.1 mouse_genomes_project 2 174215447 174255418 + MGP_CBAJ_P0058538 Bpi protein_coding protein_coding MGP_CBAJ_T0003931.1 MGP_CBAJ_G0003500.1 mouse_genomes_project 2 78163727 78175475 + Sp3os antisense antisense MGP_CBAJ_T0003932.1 MGP_CBAJ_G0003500.1 mouse_genomes_project 2 78163727 78175240 + Sp3os antisense antisense MGP_CBAJ_T0003933.1 MGP_CBAJ_G0003500.1 mouse_genomes_project 2 78163819 78175344 + Sp3os antisense antisense MGP_CBAJ_T0003934.1 MGP_CBAJ_G0003500.1 mouse_genomes_project 2 78174038 78175405 + Sp3os antisense antisense MGP_CBAJ_T0059342.1 MGP_CBAJ_G0026688.1 mouse_genomes_project 2 199420832 199472848 + MGP_CBAJ_P0059342 Ntsr1 protein_coding protein_coding MGP_CBAJ_T0059343.1 MGP_CBAJ_G0026688.1 mouse_genomes_project 2 199421083 199472087 + MGP_CBAJ_P0059343 Ntsr1 protein_coding protein_coding MGP_CBAJ_T0059358.1 MGP_CBAJ_G0026692.1 mouse_genomes_project 2 199558229 199578828 - MGP_CBAJ_P0059358 Tcfl5 protein_coding protein_coding MGP_CBAJ_T0059359.1 MGP_CBAJ_G0026692.1 mouse_genomes_project 2 199571520 199578828 - MGP_CBAJ_P0059359 Tcfl5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059360.1 MGP_CBAJ_G0026692.1 mouse_genomes_project 2 199573732 199578616 - Tcfl5 protein_coding retained_intron MGP_CBAJ_T0003937.1 MGP_CBAJ_G0003503.1 mouse_genomes_project 2 78652984 78660206 + Gm13707 antisense antisense MGP_CBAJ_T0055556.1 MGP_CBAJ_G0025808.1 mouse_genomes_project 2 97392568 97397332 - MGP_CBAJ_P0055556 Olfr1254 protein_coding protein_coding MGP_CBAJ_T0055557.1 MGP_CBAJ_G0025808.1 mouse_genomes_project 2 97392568 97393513 - MGP_CBAJ_P0055557 Olfr1254 protein_coding protein_coding MGP_CBAJ_T0058348.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171763889 171803807 - MGP_CBAJ_P0058348 Rbm39 protein_coding protein_coding MGP_CBAJ_T0058349.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171763896 171803149 - MGP_CBAJ_P0058349 Rbm39 protein_coding protein_coding MGP_CBAJ_T0058350.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171763899 171803718 - MGP_CBAJ_P0058350 Rbm39 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058351.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171763899 171803736 - MGP_CBAJ_P0058351 Rbm39 protein_coding protein_coding MGP_CBAJ_T0058352.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171764590 171803753 - MGP_CBAJ_P0058352 Rbm39 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058353.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171764590 171803745 - MGP_CBAJ_P0058353 Rbm39 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058354.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171765885 171781463 - MGP_CBAJ_P0058354 Rbm39 protein_coding protein_coding MGP_CBAJ_T0058355.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171778394 171803711 - MGP_CBAJ_P0058355 Rbm39 protein_coding protein_coding MGP_CBAJ_T0058356.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171778396 171781752 - Rbm39 protein_coding retained_intron MGP_CBAJ_T0058357.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171779378 171785794 - Rbm39 protein_coding processed_transcript MGP_CBAJ_T0058358.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171780482 171784705 - Rbm39 protein_coding retained_intron MGP_CBAJ_T0058359.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171781345 171803728 - MGP_CBAJ_P0058359 Rbm39 protein_coding protein_coding MGP_CBAJ_T0058360.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171781459 171796511 - Rbm39 protein_coding processed_transcript MGP_CBAJ_T0058361.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171784095 171801300 - Rbm39 protein_coding retained_intron MGP_CBAJ_T0058362.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171789583 171800949 - Rbm39 protein_coding processed_transcript MGP_CBAJ_T0058363.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171796382 171803730 - MGP_CBAJ_P0058363 Rbm39 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058364.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171796481 171803716 - MGP_CBAJ_P0058364 Rbm39 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058365.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171796503 171801470 - Rbm39 protein_coding retained_intron MGP_CBAJ_T0058366.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171798252 171803481 - MGP_CBAJ_P0058366 Rbm39 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058367.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171798256 171803725 - MGP_CBAJ_P0058367 Rbm39 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058368.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171798341 171803807 - MGP_CBAJ_P0058368 Rbm39 protein_coding protein_coding MGP_CBAJ_T0058369.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171800726 171803765 - Rbm39 protein_coding retained_intron MGP_CBAJ_T0058370.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171800926 171803718 - MGP_CBAJ_P0058370 Rbm39 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058371.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171802127 171803781 - Rbm39 protein_coding retained_intron MGP_CBAJ_T0058372.1 MGP_CBAJ_G0026455.1 mouse_genomes_project 2 171802129 171803714 - Rbm39 protein_coding retained_intron MGP_CBAJ_T0056289.1 MGP_CBAJ_G0025971.1 mouse_genomes_project 2 122177142 122178081 - MGP_CBAJ_P0056289 Olfr1305 protein_coding protein_coding MGP_CBAJ_T0097803.1 MGP_CBAJ_G0036076.1 mouse_genomes_project 2 22039831 22040247 - pseudogene pseudogene MGP_CBAJ_T0058131.1 MGP_CBAJ_G0026420.1 mouse_genomes_project 2 170208543 170295014 + MGP_CBAJ_P0058131 Raly protein_coding protein_coding MGP_CBAJ_T0058132.1 MGP_CBAJ_G0026420.1 mouse_genomes_project 2 170208553 170291510 + MGP_CBAJ_P0058132 Raly protein_coding protein_coding MGP_CBAJ_T0058133.1 MGP_CBAJ_G0026420.1 mouse_genomes_project 2 170208557 170295030 + MGP_CBAJ_P0058133 Raly protein_coding protein_coding MGP_CBAJ_T0058134.1 MGP_CBAJ_G0026420.1 mouse_genomes_project 2 170208565 170289610 + MGP_CBAJ_P0058134 Raly protein_coding protein_coding MGP_CBAJ_T0058135.1 MGP_CBAJ_G0026420.1 mouse_genomes_project 2 170208580 170295013 + MGP_CBAJ_P0058135 Raly protein_coding protein_coding MGP_CBAJ_T0058136.1 MGP_CBAJ_G0026420.1 mouse_genomes_project 2 170208604 170295030 + MGP_CBAJ_P0058136 Raly protein_coding protein_coding MGP_CBAJ_T0058137.1 MGP_CBAJ_G0026420.1 mouse_genomes_project 2 170208799 170291723 + MGP_CBAJ_P0058137 Raly protein_coding protein_coding MGP_CBAJ_T0058138.1 MGP_CBAJ_G0026420.1 mouse_genomes_project 2 170208801 170276135 + Raly protein_coding processed_transcript MGP_CBAJ_T0058139.1 MGP_CBAJ_G0026420.1 mouse_genomes_project 2 170208816 170285036 + Raly protein_coding processed_transcript MGP_CBAJ_T0058141.1 MGP_CBAJ_G0026420.1 mouse_genomes_project 2 170209160 170285149 + Raly protein_coding processed_transcript MGP_CBAJ_T0100423.1 MGP_CBAJ_G0038678.1 mouse_genomes_project 2 184307028 184307117 + Gm23201 snoRNA snoRNA MGP_CBAJ_T0055716.1 MGP_CBAJ_G0025844.1 mouse_genomes_project 2 99025307 99030736 + MGP_CBAJ_P0055716 Acp2 protein_coding protein_coding MGP_CBAJ_T0055717.1 MGP_CBAJ_G0025844.1 mouse_genomes_project 2 99025331 99036448 + MGP_CBAJ_P0055717 Acp2 protein_coding protein_coding MGP_CBAJ_T0055718.1 MGP_CBAJ_G0025844.1 mouse_genomes_project 2 99025346 99034492 + Acp2 protein_coding retained_intron MGP_CBAJ_T0055719.1 MGP_CBAJ_G0025844.1 mouse_genomes_project 2 99025346 99028469 + MGP_CBAJ_P0055719 Acp2 protein_coding protein_coding MGP_CBAJ_T0055720.1 MGP_CBAJ_G0025844.1 mouse_genomes_project 2 99025350 99026080 + Acp2 protein_coding processed_transcript MGP_CBAJ_T0007058.1 MGP_CBAJ_G0005784.1 mouse_genomes_project 2 25057523 25062192 + Gm26702 lincRNA lincRNA MGP_CBAJ_T0013655.1 MGP_CBAJ_G0011767.1 mouse_genomes_project 2 172029789 172030271 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0053152.1 MGP_CBAJ_G0025227.1 mouse_genomes_project 2 27282031 27287528 + Wdr5 protein_coding processed_transcript MGP_CBAJ_T0053153.1 MGP_CBAJ_G0025227.1 mouse_genomes_project 2 27282031 27303059 + MGP_CBAJ_P0053153 Wdr5 protein_coding protein_coding MGP_CBAJ_T0053154.1 MGP_CBAJ_G0025227.1 mouse_genomes_project 2 27286635 27301567 + MGP_CBAJ_P0053154 Wdr5 protein_coding protein_coding MGP_CBAJ_T0053155.1 MGP_CBAJ_G0025227.1 mouse_genomes_project 2 27294708 27299879 + Wdr5 protein_coding processed_transcript MGP_CBAJ_T0058769.1 MGP_CBAJ_G0026549.1 mouse_genomes_project 2 181202175 181206837 + MGP_CBAJ_P0058769 Dbndd2 protein_coding protein_coding MGP_CBAJ_T0058770.1 MGP_CBAJ_G0026549.1 mouse_genomes_project 2 181202524 181207345 + MGP_CBAJ_P0058770 Dbndd2 protein_coding protein_coding MGP_CBAJ_T0058771.1 MGP_CBAJ_G0026549.1 mouse_genomes_project 2 181202524 181206837 + MGP_CBAJ_P0058771 Dbndd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058772.1 MGP_CBAJ_G0026549.1 mouse_genomes_project 2 181202550 181206286 + MGP_CBAJ_P0058772 Dbndd2 protein_coding protein_coding MGP_CBAJ_T0058773.1 MGP_CBAJ_G0026549.1 mouse_genomes_project 2 181202946 181209403 + MGP_CBAJ_P0058773 Dbndd2 protein_coding protein_coding MGP_CBAJ_T0058774.1 MGP_CBAJ_G0026549.1 mouse_genomes_project 2 181203890 181206837 + MGP_CBAJ_P0058774 Dbndd2 protein_coding protein_coding MGP_CBAJ_T0057042.1 MGP_CBAJ_G0026140.1 mouse_genomes_project 2 138848166 138880624 - MGP_CBAJ_P0057042 Hdc protein_coding protein_coding MGP_CBAJ_T0057043.1 MGP_CBAJ_G0026140.1 mouse_genomes_project 2 138849083 138855644 - Hdc protein_coding processed_transcript MGP_CBAJ_T0057044.1 MGP_CBAJ_G0026140.1 mouse_genomes_project 2 138857625 138880607 - Hdc protein_coding retained_intron MGP_CBAJ_T0057045.1 MGP_CBAJ_G0026140.1 mouse_genomes_project 2 138864726 138868056 - Hdc protein_coding processed_transcript MGP_CBAJ_T0057046.1 MGP_CBAJ_G0026140.1 mouse_genomes_project 2 138878234 138881245 - Hdc protein_coding processed_transcript MGP_CBAJ_T0101795.1 MGP_CBAJ_G0039826.1 mouse_genomes_project 2 92250956 92251410 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013248.1 MGP_CBAJ_G0011360.1 mouse_genomes_project 2 10579468 10579868 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0056938.1 MGP_CBAJ_G0026114.1 mouse_genomes_project 2 134137018 134225651 + protein_coding processed_transcript MGP_CBAJ_T0017617.1 MGP_CBAJ_G0015213.1 mouse_genomes_project 2 141895488 141906101 + Gm14023 processed_transcript processed_transcript MGP_CBAJ_T0057114.1 MGP_CBAJ_G0026154.1 mouse_genomes_project 2 139632243 139648785 + Stard7 protein_coding processed_transcript MGP_CBAJ_T0057115.1 MGP_CBAJ_G0026154.1 mouse_genomes_project 2 139632607 139663056 + MGP_CBAJ_P0057115 Stard7 protein_coding protein_coding MGP_CBAJ_T0057116.1 MGP_CBAJ_G0026154.1 mouse_genomes_project 2 139632729 139663049 + MGP_CBAJ_P0057116 Stard7 protein_coding protein_coding MGP_CBAJ_T0057117.1 MGP_CBAJ_G0026154.1 mouse_genomes_project 2 139648434 139659936 + Stard7 protein_coding retained_intron MGP_CBAJ_T0057118.1 MGP_CBAJ_G0026154.1 mouse_genomes_project 2 139654228 139661425 + Stard7 protein_coding retained_intron MGP_CBAJ_T0057119.1 MGP_CBAJ_G0026154.1 mouse_genomes_project 2 139656236 139661450 + Stard7 protein_coding processed_transcript MGP_CBAJ_T0057120.1 MGP_CBAJ_G0026154.1 mouse_genomes_project 2 139656238 139661479 + Stard7 protein_coding processed_transcript MGP_CBAJ_T0056280.1 MGP_CBAJ_G0025962.1 mouse_genomes_project 2 121697276 121698173 + MGP_CBAJ_P0056280 Olfr1289 protein_coding protein_coding MGP_CBAJ_T0013450.1 MGP_CBAJ_G0011562.1 mouse_genomes_project 2 88323183 88323778 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013600.1 MGP_CBAJ_G0011712.1 mouse_genomes_project 2 153796295 153796676 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0058798.1 MGP_CBAJ_G0026561.1 mouse_genomes_project 2 181455424 181458037 + MGP_CBAJ_P0058798 Wfdc13 protein_coding protein_coding MGP_CBAJ_T0004067.1 MGP_CBAJ_G0003595.1 mouse_genomes_project 2 173999767 174029847 - 2010009K17Rik antisense antisense MGP_CBAJ_T0053172.1 MGP_CBAJ_G0025232.1 mouse_genomes_project 2 28335748 28340314 + Ppp1r26 protein_coding processed_transcript MGP_CBAJ_T0053173.1 MGP_CBAJ_G0025232.1 mouse_genomes_project 2 28335814 28340638 + Ppp1r26 protein_coding processed_transcript MGP_CBAJ_T0053174.1 MGP_CBAJ_G0025232.1 mouse_genomes_project 2 28336889 28340474 + Ppp1r26 protein_coding processed_transcript MGP_CBAJ_T0053175.1 MGP_CBAJ_G0025232.1 mouse_genomes_project 2 28336889 28345304 + MGP_CBAJ_P0053175 Ppp1r26 protein_coding protein_coding MGP_CBAJ_T0053176.1 MGP_CBAJ_G0025232.1 mouse_genomes_project 2 28336889 28345301 + MGP_CBAJ_P0053176 Ppp1r26 protein_coding protein_coding MGP_CBAJ_T0058655.1 MGP_CBAJ_G0026510.1 mouse_genomes_project 2 179520918 179549787 + MGP_CBAJ_P0058655 Ift52 protein_coding protein_coding MGP_CBAJ_T0058656.1 MGP_CBAJ_G0026510.1 mouse_genomes_project 2 179521055 179535528 + MGP_CBAJ_P0058656 Ift52 protein_coding protein_coding MGP_CBAJ_T0058657.1 MGP_CBAJ_G0026510.1 mouse_genomes_project 2 179521083 179527151 + Ift52 protein_coding processed_transcript MGP_CBAJ_T0058658.1 MGP_CBAJ_G0026510.1 mouse_genomes_project 2 179526052 179532687 + Ift52 protein_coding processed_transcript MGP_CBAJ_T0001002.1 MGP_CBAJ_G0000934.1 mouse_genomes_project 2 11219462 11222698 + TEC TEC MGP_CBAJ_T0098310.1 MGP_CBAJ_G0036577.1 mouse_genomes_project 2 20025337 20039033 - Gm13380 sense_intronic sense_intronic MGP_CBAJ_T0013499.1 MGP_CBAJ_G0011611.1 mouse_genomes_project 2 105534788 105536189 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013477.1 MGP_CBAJ_G0011589.1 mouse_genomes_project 2 94969890 94970113 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0054107.1 MGP_CBAJ_G0025373.1 mouse_genomes_project 2 37174750 37196678 - MGP_CBAJ_P0054107 Rbm18 protein_coding protein_coding MGP_CBAJ_T0054108.1 MGP_CBAJ_G0025373.1 mouse_genomes_project 2 37176271 37196686 - MGP_CBAJ_P0054108 Rbm18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054109.1 MGP_CBAJ_G0025373.1 mouse_genomes_project 2 37176446 37196725 - MGP_CBAJ_P0054109 Rbm18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054110.1 MGP_CBAJ_G0025373.1 mouse_genomes_project 2 37186305 37196721 - Rbm18 protein_coding retained_intron MGP_CBAJ_T0100404.1 MGP_CBAJ_G0038659.1 mouse_genomes_project 2 164217202 164217294 - Gm24551 snoRNA snoRNA MGP_CBAJ_T0003935.1 MGP_CBAJ_G0003501.1 mouse_genomes_project 2 78588478 78595352 + Gm13703 antisense antisense MGP_CBAJ_T0011369.1 MGP_CBAJ_G0009507.1 mouse_genomes_project 2 47223828 47223889 + Gm27676 misc_RNA misc_RNA MGP_CBAJ_T0101801.1 MGP_CBAJ_G0039832.1 mouse_genomes_project 2 93239568 93240511 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0017657.1 MGP_CBAJ_G0015232.1 mouse_genomes_project 2 179107868 179113715 + 9430021M05Rik processed_transcript processed_transcript MGP_CBAJ_T0057757.1 MGP_CBAJ_G0026301.1 mouse_genomes_project 2 161450152 161452279 - MGP_CBAJ_P0057757 Nkx2-4 protein_coding protein_coding MGP_CBAJ_T0013509.1 MGP_CBAJ_G0011621.1 mouse_genomes_project 2 111286186 111289092 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055586.1 MGP_CBAJ_G0025828.1 mouse_genomes_project 2 98147509 98148201 - Ptprj protein_coding processed_transcript MGP_CBAJ_T0055587.1 MGP_CBAJ_G0025828.1 mouse_genomes_project 2 98147511 98210842 - MGP_CBAJ_P0055587 Ptprj protein_coding protein_coding MGP_CBAJ_T0055588.1 MGP_CBAJ_G0025828.1 mouse_genomes_project 2 98151637 98323460 - MGP_CBAJ_P0055588 Ptprj protein_coding protein_coding MGP_CBAJ_T0055589.1 MGP_CBAJ_G0025828.1 mouse_genomes_project 2 98151637 98203021 - MGP_CBAJ_P0055589 Ptprj protein_coding protein_coding MGP_CBAJ_T0013232.1 MGP_CBAJ_G0011344.1 mouse_genomes_project 2 2128974 2129285 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0017529.1 MGP_CBAJ_G0015168.1 mouse_genomes_project 2 76779267 76781965 + Gm13663 processed_transcript processed_transcript MGP_CBAJ_T0017530.1 MGP_CBAJ_G0015168.1 mouse_genomes_project 2 76780227 76781925 + Gm13663 processed_transcript processed_transcript MGP_CBAJ_T0058193.1 MGP_CBAJ_G0026431.1 mouse_genomes_project 2 171045920 171090470 + MGP_CBAJ_P0058193 Acss2 protein_coding protein_coding MGP_CBAJ_T0058194.1 MGP_CBAJ_G0026431.1 mouse_genomes_project 2 171046005 171053215 + Acss2 protein_coding retained_intron MGP_CBAJ_T0058195.1 MGP_CBAJ_G0026431.1 mouse_genomes_project 2 171046029 171120840 + MGP_CBAJ_P0058195 Acss2 protein_coding protein_coding MGP_CBAJ_T0058196.1 MGP_CBAJ_G0026431.1 mouse_genomes_project 2 171046041 171080057 + Acss2 protein_coding retained_intron MGP_CBAJ_T0058197.1 MGP_CBAJ_G0026431.1 mouse_genomes_project 2 171046079 171089804 + MGP_CBAJ_P0058197 Acss2 protein_coding protein_coding MGP_CBAJ_T0058198.1 MGP_CBAJ_G0026431.1 mouse_genomes_project 2 171046079 171089804 + MGP_CBAJ_P0058198 Acss2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058199.1 MGP_CBAJ_G0026431.1 mouse_genomes_project 2 171076889 171077527 + Acss2 protein_coding retained_intron MGP_CBAJ_T0058200.1 MGP_CBAJ_G0026431.1 mouse_genomes_project 2 171076900 171085024 + MGP_CBAJ_P0058200 Acss2 protein_coding protein_coding MGP_CBAJ_T0058205.1 MGP_CBAJ_G0026431.1 mouse_genomes_project 2 171096251 171120382 + Acss2 protein_coding processed_transcript MGP_CBAJ_T0058206.1 MGP_CBAJ_G0026431.1 mouse_genomes_project 2 171103751 171107879 + Acss2 protein_coding retained_intron MGP_CBAJ_T0056751.1 MGP_CBAJ_G0026076.1 mouse_genomes_project 2 132503693 132519597 - MGP_CBAJ_P0056751 Tgm7 protein_coding protein_coding MGP_CBAJ_T0004027.1 MGP_CBAJ_G0003562.1 mouse_genomes_project 2 148611236 148889344 - 9630028H03Rik antisense antisense MGP_CBAJ_T0004028.1 MGP_CBAJ_G0003562.1 mouse_genomes_project 2 148886289 148889056 - 9630028H03Rik antisense antisense MGP_CBAJ_T0003885.1 MGP_CBAJ_G0003465.1 mouse_genomes_project 2 35141757 35160157 + C79798 antisense antisense MGP_CBAJ_T0054836.1 MGP_CBAJ_G0025524.1 mouse_genomes_project 2 75372029 75405696 + MGP_CBAJ_P0054836 Erich2 protein_coding protein_coding MGP_CBAJ_T0054837.1 MGP_CBAJ_G0025524.1 mouse_genomes_project 2 75372041 75405696 + MGP_CBAJ_P0054837 Erich2 protein_coding protein_coding MGP_CBAJ_T0054838.1 MGP_CBAJ_G0025524.1 mouse_genomes_project 2 75372670 75401952 + Erich2 protein_coding retained_intron MGP_CBAJ_T0054839.1 MGP_CBAJ_G0025524.1 mouse_genomes_project 2 75372670 75388745 + Erich2 protein_coding retained_intron MGP_CBAJ_T0054840.1 MGP_CBAJ_G0025524.1 mouse_genomes_project 2 75372707 75392624 + MGP_CBAJ_P0054840 Erich2 protein_coding protein_coding MGP_CBAJ_T0007082.1 MGP_CBAJ_G0005802.1 mouse_genomes_project 2 36486278 36488838 + Gm35202 lincRNA lincRNA MGP_CBAJ_T0053199.1 MGP_CBAJ_G0025239.1 mouse_genomes_project 2 28460845 28478282 - MGP_CBAJ_P0053199 Gtf3c5 protein_coding protein_coding MGP_CBAJ_T0053200.1 MGP_CBAJ_G0025239.1 mouse_genomes_project 2 28460845 28478192 - MGP_CBAJ_P0053200 Gtf3c5 protein_coding protein_coding MGP_CBAJ_T0053201.1 MGP_CBAJ_G0025239.1 mouse_genomes_project 2 28463289 28466369 - Gtf3c5 protein_coding retained_intron MGP_CBAJ_T0053202.1 MGP_CBAJ_G0025239.1 mouse_genomes_project 2 28467427 28469103 - Gtf3c5 protein_coding retained_intron MGP_CBAJ_T0053203.1 MGP_CBAJ_G0025239.1 mouse_genomes_project 2 28474234 28478270 - Gtf3c5 protein_coding retained_intron MGP_CBAJ_T0053204.1 MGP_CBAJ_G0025239.1 mouse_genomes_project 2 28474767 28477991 - MGP_CBAJ_P0053204 Gtf3c5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053205.1 MGP_CBAJ_G0025239.1 mouse_genomes_project 2 28478007 28478754 - Gtf3c5 protein_coding processed_transcript MGP_CBAJ_T0058743.1 MGP_CBAJ_G0026539.1 mouse_genomes_project 2 180935487 180938028 - MGP_CBAJ_P0058743 Svs4 protein_coding protein_coding MGP_CBAJ_T0055293.1 MGP_CBAJ_G0025617.1 mouse_genomes_project 2 91167014 91196794 - MGP_CBAJ_P0055293 Zdhhc5 protein_coding protein_coding MGP_CBAJ_T0055294.1 MGP_CBAJ_G0025617.1 mouse_genomes_project 2 91192750 91196300 - Zdhhc5 protein_coding processed_transcript MGP_CBAJ_T0055295.1 MGP_CBAJ_G0025617.1 mouse_genomes_project 2 91192899 91196650 - Zdhhc5 protein_coding processed_transcript MGP_CBAJ_T0056108.1 MGP_CBAJ_G0025910.1 mouse_genomes_project 2 113342591 113344165 + MGP_CBAJ_P0056108 Gm10912 protein_coding protein_coding MGP_CBAJ_T0052842.1 MGP_CBAJ_G0025168.1 mouse_genomes_project 2 25052681 25054466 - MGP_CBAJ_P0052842 Phpt1 protein_coding protein_coding MGP_CBAJ_T0052843.1 MGP_CBAJ_G0025168.1 mouse_genomes_project 2 25052753 25054120 - Phpt1 protein_coding processed_transcript MGP_CBAJ_T0054958.1 MGP_CBAJ_G0025545.1 mouse_genomes_project 2 78155851 78173514 - MGP_CBAJ_P0054958 Gm11084 protein_coding protein_coding MGP_CBAJ_T0055405.1 MGP_CBAJ_G0025681.1 mouse_genomes_project 2 93228079 93228962 - MGP_CBAJ_P0055405 protein_coding protein_coding MGP_CBAJ_T0052279.1 MGP_CBAJ_G0025068.1 mouse_genomes_project 2 11779833 11826391 - MGP_CBAJ_P0052279 Trdmt1 protein_coding protein_coding MGP_CBAJ_T0052280.1 MGP_CBAJ_G0025068.1 mouse_genomes_project 2 11789009 11826373 - Trdmt1 protein_coding processed_transcript MGP_CBAJ_T0052281.1 MGP_CBAJ_G0025068.1 mouse_genomes_project 2 11795007 11826386 - MGP_CBAJ_P0052281 Trdmt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052088.1 MGP_CBAJ_G0025043.1 mouse_genomes_project 2 3746516 3880764 + MGP_CBAJ_P0052088 Usp6nl protein_coding protein_coding MGP_CBAJ_T0052089.1 MGP_CBAJ_G0025043.1 mouse_genomes_project 2 3746621 3855386 + Usp6nl protein_coding processed_transcript MGP_CBAJ_T0052090.1 MGP_CBAJ_G0025043.1 mouse_genomes_project 2 3777601 3877868 + MGP_CBAJ_P0052090 Usp6nl protein_coding protein_coding MGP_CBAJ_T0052091.1 MGP_CBAJ_G0025043.1 mouse_genomes_project 2 3855295 3859209 + Usp6nl protein_coding processed_transcript MGP_CBAJ_T0100414.1 MGP_CBAJ_G0038669.1 mouse_genomes_project 2 174331614 174331727 - Gm26003 snoRNA snoRNA MGP_CBAJ_T0003905.1 MGP_CBAJ_G0003481.1 mouse_genomes_project 2 64271263 64274425 + Gm13583 antisense antisense MGP_CBAJ_T0003906.1 MGP_CBAJ_G0003481.1 mouse_genomes_project 2 64271265 64271388 + Gm13583 antisense antisense MGP_CBAJ_T0003907.1 MGP_CBAJ_G0003481.1 mouse_genomes_project 2 64272856 64273776 + Gm13583 antisense antisense MGP_CBAJ_T0013334.1 MGP_CBAJ_G0011446.1 mouse_genomes_project 2 41731767 41732284 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0053221.1 MGP_CBAJ_G0025242.1 mouse_genomes_project 2 28592599 28600121 - MGP_CBAJ_P0053221 Spaca9 protein_coding protein_coding MGP_CBAJ_T0053222.1 MGP_CBAJ_G0025242.1 mouse_genomes_project 2 28592603 28600153 - MGP_CBAJ_P0053222 Spaca9 protein_coding protein_coding MGP_CBAJ_T0053223.1 MGP_CBAJ_G0025242.1 mouse_genomes_project 2 28593531 28600197 - Spaca9 protein_coding processed_transcript MGP_CBAJ_T0053224.1 MGP_CBAJ_G0025242.1 mouse_genomes_project 2 28594222 28600144 - Spaca9 protein_coding processed_transcript MGP_CBAJ_T0052703.1 MGP_CBAJ_G0025146.1 mouse_genomes_project 2 24707154 24708526 - Ssna1 protein_coding processed_transcript MGP_CBAJ_T0052704.1 MGP_CBAJ_G0025146.1 mouse_genomes_project 2 24707154 24708532 - MGP_CBAJ_P0052704 Ssna1 protein_coding protein_coding MGP_CBAJ_T0052705.1 MGP_CBAJ_G0025146.1 mouse_genomes_project 2 24707201 24708554 - Ssna1 protein_coding processed_transcript MGP_CBAJ_T0052706.1 MGP_CBAJ_G0025146.1 mouse_genomes_project 2 24707821 24708520 - Ssna1 protein_coding processed_transcript MGP_CBAJ_T0011362.1 MGP_CBAJ_G0009500.1 mouse_genomes_project 2 20341909 20342086 - Gm23007 misc_RNA misc_RNA MGP_CBAJ_T0099090.1 MGP_CBAJ_G0037345.1 mouse_genomes_project 2 19329161 19329268 + Gm23970 snRNA snRNA MGP_CBAJ_T0053108.1 MGP_CBAJ_G0025219.1 mouse_genomes_project 2 26735816 26742376 - Slc2a6 protein_coding processed_transcript MGP_CBAJ_T0053109.1 MGP_CBAJ_G0025219.1 mouse_genomes_project 2 26735816 26742400 - Slc2a6 protein_coding processed_transcript MGP_CBAJ_T0053110.1 MGP_CBAJ_G0025219.1 mouse_genomes_project 2 26735816 26742363 - MGP_CBAJ_P0053110 Slc2a6 protein_coding protein_coding MGP_CBAJ_T0053111.1 MGP_CBAJ_G0025219.1 mouse_genomes_project 2 26735816 26742452 - MGP_CBAJ_P0053111 Slc2a6 protein_coding protein_coding MGP_CBAJ_T0053112.1 MGP_CBAJ_G0025219.1 mouse_genomes_project 2 26738521 26740445 - Slc2a6 protein_coding processed_transcript MGP_CBAJ_T0053113.1 MGP_CBAJ_G0025219.1 mouse_genomes_project 2 26740541 26742445 - MGP_CBAJ_P0053113 Slc2a6 protein_coding protein_coding MGP_CBAJ_T0053639.1 MGP_CBAJ_G0025304.1 mouse_genomes_project 2 32355237 32441617 + MGP_CBAJ_P0053639 Lamc3 protein_coding protein_coding MGP_CBAJ_T0053640.1 MGP_CBAJ_G0025304.1 mouse_genomes_project 2 32355290 32442910 + MGP_CBAJ_P0053640 Lamc3 protein_coding protein_coding MGP_CBAJ_T0053641.1 MGP_CBAJ_G0025304.1 mouse_genomes_project 2 32407250 32407889 + Lamc3 protein_coding processed_transcript MGP_CBAJ_T0013528.1 MGP_CBAJ_G0011640.1 mouse_genomes_project 2 116622518 116622986 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0054162.1 MGP_CBAJ_G0025406.1 mouse_genomes_project 2 38553373 38558793 - MGP_CBAJ_P0054162 Zbtb6 protein_coding protein_coding MGP_CBAJ_T0054163.1 MGP_CBAJ_G0025406.1 mouse_genomes_project 2 38553376 38571040 - MGP_CBAJ_P0054163 Zbtb6 protein_coding protein_coding MGP_CBAJ_T0055392.1 MGP_CBAJ_G0025668.1 mouse_genomes_project 2 92851748 92852708 - MGP_CBAJ_P0055392 Olfr52 protein_coding protein_coding MGP_CBAJ_T0059450.1 MGP_CBAJ_G0026710.1 mouse_genomes_project 2 200257247 200305996 - MGP_CBAJ_P0059450 Gmeb2 protein_coding protein_coding MGP_CBAJ_T0059451.1 MGP_CBAJ_G0026710.1 mouse_genomes_project 2 200259583 200290043 - MGP_CBAJ_P0059451 Gmeb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059452.1 MGP_CBAJ_G0026710.1 mouse_genomes_project 2 200260573 200261930 - Gmeb2 protein_coding retained_intron MGP_CBAJ_T0059453.1 MGP_CBAJ_G0026710.1 mouse_genomes_project 2 200261716 200305006 - MGP_CBAJ_P0059453 Gmeb2 protein_coding protein_coding MGP_CBAJ_T0059454.1 MGP_CBAJ_G0026710.1 mouse_genomes_project 2 200261736 200305977 - MGP_CBAJ_P0059454 Gmeb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059455.1 MGP_CBAJ_G0026710.1 mouse_genomes_project 2 200271394 200305992 - Gmeb2 protein_coding retained_intron MGP_CBAJ_T0010362.1 MGP_CBAJ_G0008500.1 mouse_genomes_project 2 192708946 192709014 + Gm27591 miRNA miRNA MGP_CBAJ_T0056244.1 MGP_CBAJ_G0025941.1 mouse_genomes_project 2 120037191 120063133 + MGP_CBAJ_P0056244 Ccdc34 protein_coding protein_coding MGP_CBAJ_T0056245.1 MGP_CBAJ_G0025941.1 mouse_genomes_project 2 120037336 120183385 + MGP_CBAJ_P0056245 Ccdc34 protein_coding protein_coding MGP_CBAJ_T0056246.1 MGP_CBAJ_G0025941.1 mouse_genomes_project 2 120037354 120063139 + MGP_CBAJ_P0056246 Ccdc34 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056247.1 MGP_CBAJ_G0025941.1 mouse_genomes_project 2 120041352 120059080 + Ccdc34 protein_coding retained_intron MGP_CBAJ_T0056248.1 MGP_CBAJ_G0025941.1 mouse_genomes_project 2 120055840 120062666 + Ccdc34 protein_coding retained_intron MGP_CBAJ_T0056249.1 MGP_CBAJ_G0025941.1 mouse_genomes_project 2 120058711 120062481 + Ccdc34 protein_coding retained_intron MGP_CBAJ_T0056283.1 MGP_CBAJ_G0025965.1 mouse_genomes_project 2 121883058 121883997 - MGP_CBAJ_P0056283 Olfr1297 protein_coding protein_coding MGP_CBAJ_T0100365.1 MGP_CBAJ_G0038620.1 mouse_genomes_project 2 57146513 57146646 + Gm22298 snoRNA snoRNA MGP_CBAJ_T0058170.1 MGP_CBAJ_G0026427.1 mouse_genomes_project 2 170777366 170800581 - Pigu protein_coding processed_transcript MGP_CBAJ_T0058171.1 MGP_CBAJ_G0026427.1 mouse_genomes_project 2 170777366 170859749 - MGP_CBAJ_P0058171 Pigu protein_coding protein_coding MGP_CBAJ_T0058172.1 MGP_CBAJ_G0026427.1 mouse_genomes_project 2 170777367 170859743 - MGP_CBAJ_P0058172 Pigu protein_coding protein_coding MGP_CBAJ_T0058173.1 MGP_CBAJ_G0026427.1 mouse_genomes_project 2 170800544 170803918 - Pigu protein_coding processed_transcript MGP_CBAJ_T0058174.1 MGP_CBAJ_G0026427.1 mouse_genomes_project 2 170834931 170859738 - Pigu protein_coding retained_intron MGP_CBAJ_T0003859.1 MGP_CBAJ_G0003444.1 mouse_genomes_project 2 26921392 26969849 + Sardhos antisense antisense MGP_CBAJ_T0001038.1 MGP_CBAJ_G0000970.1 mouse_genomes_project 2 39725780 39730637 + TEC TEC MGP_CBAJ_T0099104.1 MGP_CBAJ_G0037359.1 mouse_genomes_project 2 50833892 50834012 - Gm25338 snRNA snRNA MGP_CBAJ_T0010244.1 MGP_CBAJ_G0008382.1 mouse_genomes_project 2 8398339 8398437 + Mir297a-4 miRNA miRNA MGP_CBAJ_T0058866.1 MGP_CBAJ_G0026579.1 mouse_genomes_project 2 181781308 181783282 + MGP_CBAJ_P0058866 Slc12a5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058867.1 MGP_CBAJ_G0026579.1 mouse_genomes_project 2 181781322 181795029 + Slc12a5 protein_coding processed_transcript MGP_CBAJ_T0058868.1 MGP_CBAJ_G0026579.1 mouse_genomes_project 2 181781330 181828797 + MGP_CBAJ_P0058868 Slc12a5 protein_coding protein_coding MGP_CBAJ_T0058869.1 MGP_CBAJ_G0026579.1 mouse_genomes_project 2 181781352 181830932 + MGP_CBAJ_P0058869 Slc12a5 protein_coding protein_coding MGP_CBAJ_T0058870.1 MGP_CBAJ_G0026579.1 mouse_genomes_project 2 181788508 181830941 + MGP_CBAJ_P0058870 Slc12a5 protein_coding protein_coding MGP_CBAJ_T0058871.1 MGP_CBAJ_G0026579.1 mouse_genomes_project 2 181788764 181830937 + MGP_CBAJ_P0058871 Slc12a5 protein_coding protein_coding MGP_CBAJ_T0058872.1 MGP_CBAJ_G0026579.1 mouse_genomes_project 2 181788806 181814500 + MGP_CBAJ_P0058872 Slc12a5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058873.1 MGP_CBAJ_G0026579.1 mouse_genomes_project 2 181806658 181810875 + Slc12a5 protein_coding retained_intron MGP_CBAJ_T0058874.1 MGP_CBAJ_G0026579.1 mouse_genomes_project 2 181827818 181830932 + Slc12a5 protein_coding retained_intron MGP_CBAJ_T0056008.1 MGP_CBAJ_G0025894.1 mouse_genomes_project 2 111421620 111544137 - MGP_CBAJ_P0056008 Trim44 protein_coding protein_coding MGP_CBAJ_T0056009.1 MGP_CBAJ_G0025894.1 mouse_genomes_project 2 111425997 111543494 - MGP_CBAJ_P0056009 Trim44 protein_coding protein_coding MGP_CBAJ_T0056010.1 MGP_CBAJ_G0025894.1 mouse_genomes_project 2 111493545 111552923 - MGP_CBAJ_P0056010 Trim44 protein_coding protein_coding MGP_CBAJ_T0013631.1 MGP_CBAJ_G0011743.1 mouse_genomes_project 2 164828934 164829929 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0059154.1 MGP_CBAJ_G0026636.1 mouse_genomes_project 2 190528118 190541597 + MGP_CBAJ_P0059154 Fam210b protein_coding protein_coding MGP_CBAJ_T0053419.1 MGP_CBAJ_G0025273.1 mouse_genomes_project 2 30422452 30444496 + MGP_CBAJ_P0053419 Phyhd1 protein_coding protein_coding MGP_CBAJ_T0053420.1 MGP_CBAJ_G0025273.1 mouse_genomes_project 2 30422778 30444497 + MGP_CBAJ_P0053420 Phyhd1 protein_coding protein_coding MGP_CBAJ_T0053421.1 MGP_CBAJ_G0025273.1 mouse_genomes_project 2 30422970 30444496 + MGP_CBAJ_P0053421 Phyhd1 protein_coding protein_coding MGP_CBAJ_T0053422.1 MGP_CBAJ_G0025273.1 mouse_genomes_project 2 30422984 30443414 + MGP_CBAJ_P0053422 Phyhd1 protein_coding protein_coding MGP_CBAJ_T0053423.1 MGP_CBAJ_G0025273.1 mouse_genomes_project 2 30423068 30442593 + MGP_CBAJ_P0053423 Phyhd1 protein_coding protein_coding MGP_CBAJ_T0053424.1 MGP_CBAJ_G0025273.1 mouse_genomes_project 2 30423098 30444485 + MGP_CBAJ_P0053424 Phyhd1 protein_coding protein_coding MGP_CBAJ_T0053425.1 MGP_CBAJ_G0025273.1 mouse_genomes_project 2 30423100 30441874 + Phyhd1 protein_coding processed_transcript MGP_CBAJ_T0053426.1 MGP_CBAJ_G0025273.1 mouse_genomes_project 2 30423105 30443462 + MGP_CBAJ_P0053426 Phyhd1 protein_coding protein_coding MGP_CBAJ_T0053427.1 MGP_CBAJ_G0025273.1 mouse_genomes_project 2 30423112 30444446 + MGP_CBAJ_P0053427 Phyhd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053428.1 MGP_CBAJ_G0025273.1 mouse_genomes_project 2 30423112 30444446 + MGP_CBAJ_P0053428 Phyhd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053429.1 MGP_CBAJ_G0025273.1 mouse_genomes_project 2 30439350 30444488 + MGP_CBAJ_P0053429 Phyhd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053430.1 MGP_CBAJ_G0025273.1 mouse_genomes_project 2 30441978 30444202 + Phyhd1 protein_coding retained_intron MGP_CBAJ_T0053431.1 MGP_CBAJ_G0025273.1 mouse_genomes_project 2 30442025 30442858 + Phyhd1 protein_coding retained_intron MGP_CBAJ_T0052154.1 MGP_CBAJ_G0025054.1 mouse_genomes_project 2 9137391 9241024 + Prkcq protein_coding retained_intron MGP_CBAJ_T0052155.1 MGP_CBAJ_G0025054.1 mouse_genomes_project 2 9137589 9267483 + Prkcq protein_coding retained_intron MGP_CBAJ_T0052156.1 MGP_CBAJ_G0025054.1 mouse_genomes_project 2 9193255 9285886 + MGP_CBAJ_P0052156 Prkcq protein_coding protein_coding MGP_CBAJ_T0052157.1 MGP_CBAJ_G0025054.1 mouse_genomes_project 2 9197155 9285881 + MGP_CBAJ_P0052157 Prkcq protein_coding protein_coding MGP_CBAJ_T0052158.1 MGP_CBAJ_G0025054.1 mouse_genomes_project 2 9224031 9231644 + Prkcq protein_coding retained_intron MGP_CBAJ_T0052159.1 MGP_CBAJ_G0025054.1 mouse_genomes_project 2 9226410 9286460 + Prkcq protein_coding processed_transcript MGP_CBAJ_T0099148.1 MGP_CBAJ_G0037403.1 mouse_genomes_project 2 200742226 200742333 + Gm25879 snRNA snRNA MGP_CBAJ_T0052922.1 MGP_CBAJ_G0025189.1 mouse_genomes_project 2 25604694 25646898 - MGP_CBAJ_P0052922 Nacc2 protein_coding protein_coding MGP_CBAJ_T0052923.1 MGP_CBAJ_G0025189.1 mouse_genomes_project 2 25604694 25679969 - MGP_CBAJ_P0052923 Nacc2 protein_coding protein_coding MGP_CBAJ_T0052924.1 MGP_CBAJ_G0025189.1 mouse_genomes_project 2 25613344 25614771 - Nacc2 protein_coding processed_transcript MGP_CBAJ_T0052925.1 MGP_CBAJ_G0025189.1 mouse_genomes_project 2 25616650 25646540 - Nacc2 protein_coding processed_transcript MGP_CBAJ_T0052926.1 MGP_CBAJ_G0025189.1 mouse_genomes_project 2 25616772 25645096 - Nacc2 protein_coding processed_transcript MGP_CBAJ_T0052927.1 MGP_CBAJ_G0025189.1 mouse_genomes_project 2 25644527 25680371 - Nacc2 protein_coding processed_transcript MGP_CBAJ_T0052928.1 MGP_CBAJ_G0025189.1 mouse_genomes_project 2 25644806 25679934 - MGP_CBAJ_P0052928 Nacc2 protein_coding protein_coding MGP_CBAJ_T0052929.1 MGP_CBAJ_G0025189.1 mouse_genomes_project 2 25645048 25679939 - Nacc2 protein_coding processed_transcript MGP_CBAJ_T0053441.1 MGP_CBAJ_G0025277.1 mouse_genomes_project 2 30509736 30524125 - MGP_CBAJ_P0053441 Sh3glb2 protein_coding protein_coding MGP_CBAJ_T0053442.1 MGP_CBAJ_G0025277.1 mouse_genomes_project 2 30509736 30524201 - MGP_CBAJ_P0053442 Sh3glb2 protein_coding protein_coding MGP_CBAJ_T0053443.1 MGP_CBAJ_G0025277.1 mouse_genomes_project 2 30509738 30524174 - MGP_CBAJ_P0053443 Sh3glb2 protein_coding protein_coding MGP_CBAJ_T0053444.1 MGP_CBAJ_G0025277.1 mouse_genomes_project 2 30509738 30524150 - MGP_CBAJ_P0053444 Sh3glb2 protein_coding protein_coding MGP_CBAJ_T0053445.1 MGP_CBAJ_G0025277.1 mouse_genomes_project 2 30509738 30524217 - MGP_CBAJ_P0053445 Sh3glb2 protein_coding protein_coding MGP_CBAJ_T0053446.1 MGP_CBAJ_G0025277.1 mouse_genomes_project 2 30510062 30524190 - Sh3glb2 protein_coding retained_intron MGP_CBAJ_T0053447.1 MGP_CBAJ_G0025277.1 mouse_genomes_project 2 30510068 30511029 - Sh3glb2 protein_coding processed_transcript MGP_CBAJ_T0053448.1 MGP_CBAJ_G0025277.1 mouse_genomes_project 2 30510747 30524222 - Sh3glb2 protein_coding processed_transcript MGP_CBAJ_T0053449.1 MGP_CBAJ_G0025277.1 mouse_genomes_project 2 30510813 30512584 - Sh3glb2 protein_coding retained_intron MGP_CBAJ_T0053450.1 MGP_CBAJ_G0025277.1 mouse_genomes_project 2 30511035 30512515 - Sh3glb2 protein_coding retained_intron MGP_CBAJ_T0053451.1 MGP_CBAJ_G0025277.1 mouse_genomes_project 2 30512995 30520249 - Sh3glb2 protein_coding retained_intron MGP_CBAJ_T0053452.1 MGP_CBAJ_G0025277.1 mouse_genomes_project 2 30513017 30519764 - Sh3glb2 protein_coding retained_intron MGP_CBAJ_T0053453.1 MGP_CBAJ_G0025277.1 mouse_genomes_project 2 30514410 30524130 - Sh3glb2 protein_coding processed_transcript MGP_CBAJ_T0053454.1 MGP_CBAJ_G0025277.1 mouse_genomes_project 2 30514667 30524145 - Sh3glb2 protein_coding retained_intron MGP_CBAJ_T0056344.1 MGP_CBAJ_G0025995.1 mouse_genomes_project 2 124358823 124374091 - MGP_CBAJ_P0056344 Arhgap11a protein_coding protein_coding MGP_CBAJ_T0056345.1 MGP_CBAJ_G0025995.1 mouse_genomes_project 2 124359111 124374299 - MGP_CBAJ_P0056345 Arhgap11a protein_coding protein_coding MGP_CBAJ_T0013394.1 MGP_CBAJ_G0011506.1 mouse_genomes_project 2 68755201 68755979 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0052940.1 MGP_CBAJ_G0025194.1 mouse_genomes_project 2 25896794 25926224 + MGP_CBAJ_P0052940 Gpsm1 protein_coding protein_coding MGP_CBAJ_T0052941.1 MGP_CBAJ_G0025194.1 mouse_genomes_project 2 25896871 25926224 + MGP_CBAJ_P0052941 Gpsm1 protein_coding protein_coding MGP_CBAJ_T0052942.1 MGP_CBAJ_G0025194.1 mouse_genomes_project 2 25901064 25926224 + MGP_CBAJ_P0052942 Gpsm1 protein_coding protein_coding MGP_CBAJ_T0052943.1 MGP_CBAJ_G0025194.1 mouse_genomes_project 2 25904882 25926224 + MGP_CBAJ_P0052943 Gpsm1 protein_coding protein_coding MGP_CBAJ_T0052944.1 MGP_CBAJ_G0025194.1 mouse_genomes_project 2 25906624 25908978 + Gpsm1 protein_coding processed_transcript MGP_CBAJ_T0052945.1 MGP_CBAJ_G0025194.1 mouse_genomes_project 2 25907135 25918437 + Gpsm1 protein_coding processed_transcript MGP_CBAJ_T0052946.1 MGP_CBAJ_G0025194.1 mouse_genomes_project 2 25907325 25917907 + Gpsm1 protein_coding processed_transcript MGP_CBAJ_T0052947.1 MGP_CBAJ_G0025194.1 mouse_genomes_project 2 25913636 25926224 + MGP_CBAJ_P0052947 Gpsm1 protein_coding protein_coding MGP_CBAJ_T0052948.1 MGP_CBAJ_G0025194.1 mouse_genomes_project 2 25913679 25918518 + MGP_CBAJ_P0052948 Gpsm1 protein_coding protein_coding MGP_CBAJ_T0052949.1 MGP_CBAJ_G0025194.1 mouse_genomes_project 2 25917417 25923318 + Gpsm1 protein_coding processed_transcript MGP_CBAJ_T0052950.1 MGP_CBAJ_G0025194.1 mouse_genomes_project 2 25917434 25922711 + Gpsm1 protein_coding processed_transcript MGP_CBAJ_T0052951.1 MGP_CBAJ_G0025194.1 mouse_genomes_project 2 25920275 25925262 + Gpsm1 protein_coding processed_transcript MGP_CBAJ_T0052952.1 MGP_CBAJ_G0025194.1 mouse_genomes_project 2 25922224 25924897 + Gpsm1 protein_coding processed_transcript MGP_CBAJ_T0007098.1 MGP_CBAJ_G0005815.1 mouse_genomes_project 2 53904229 53904710 + Gm28639 lincRNA lincRNA MGP_CBAJ_T0054133.1 MGP_CBAJ_G0025388.1 mouse_genomes_project 2 37918037 37918976 + MGP_CBAJ_P0054133 Olfr350 protein_coding protein_coding MGP_CBAJ_T0007178.1 MGP_CBAJ_G0005880.1 mouse_genomes_project 2 112429915 112434065 - Gm13869 lincRNA lincRNA MGP_CBAJ_T0013565.1 MGP_CBAJ_G0011677.1 mouse_genomes_project 2 139163101 139163950 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013622.1 MGP_CBAJ_G0011734.1 mouse_genomes_project 2 161676799 161677281 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057673.1 MGP_CBAJ_G0026285.1 mouse_genomes_project 2 158604973 158670087 - MGP_CBAJ_P0057673 Dzank1 protein_coding protein_coding MGP_CBAJ_T0057674.1 MGP_CBAJ_G0026285.1 mouse_genomes_project 2 158604975 158670103 - MGP_CBAJ_P0057674 Dzank1 protein_coding protein_coding MGP_CBAJ_T0057675.1 MGP_CBAJ_G0026285.1 mouse_genomes_project 2 158649331 158670053 - Dzank1 protein_coding retained_intron MGP_CBAJ_T0057676.1 MGP_CBAJ_G0026285.1 mouse_genomes_project 2 158665151 158669337 - Dzank1 protein_coding processed_transcript MGP_CBAJ_T0007096.1 MGP_CBAJ_G0005813.1 mouse_genomes_project 2 52357663 52364636 - Gm13480 lincRNA lincRNA MGP_CBAJ_T0056304.1 MGP_CBAJ_G0025983.1 mouse_genomes_project 2 122643874 122742043 + MGP_CBAJ_P0056304 Slc12a6 protein_coding protein_coding MGP_CBAJ_T0056306.1 MGP_CBAJ_G0025983.1 mouse_genomes_project 2 122644791 122738945 + MGP_CBAJ_P0056306 Slc12a6 protein_coding protein_coding MGP_CBAJ_T0056307.1 MGP_CBAJ_G0025983.1 mouse_genomes_project 2 122644868 122746072 + MGP_CBAJ_P0056307 Slc12a6 protein_coding protein_coding MGP_CBAJ_T0056308.1 MGP_CBAJ_G0025983.1 mouse_genomes_project 2 122662582 122746072 + MGP_CBAJ_P0056308 Slc12a6 protein_coding protein_coding MGP_CBAJ_T0056309.1 MGP_CBAJ_G0025983.1 mouse_genomes_project 2 122728828 122734548 + Slc12a6 protein_coding processed_transcript MGP_CBAJ_T0056310.1 MGP_CBAJ_G0025983.1 mouse_genomes_project 2 122735441 122737154 + Slc12a6 protein_coding processed_transcript MGP_CBAJ_T0056311.1 MGP_CBAJ_G0025983.1 mouse_genomes_project 2 122737117 122739803 + Slc12a6 protein_coding processed_transcript MGP_CBAJ_T0056312.1 MGP_CBAJ_G0025983.1 mouse_genomes_project 2 122739110 122746079 + Slc12a6 protein_coding retained_intron MGP_CBAJ_T0100356.1 MGP_CBAJ_G0038611.1 mouse_genomes_project 2 33913471 33913608 - Gm23546 snoRNA snoRNA MGP_CBAJ_T0056690.1 MGP_CBAJ_G0026066.1 mouse_genomes_project 2 131962560 131967852 - MGP_CBAJ_P0056690 Lrrc57 protein_coding protein_coding MGP_CBAJ_T0056691.1 MGP_CBAJ_G0026066.1 mouse_genomes_project 2 131962560 131967687 - MGP_CBAJ_P0056691 Lrrc57 protein_coding protein_coding MGP_CBAJ_T0056692.1 MGP_CBAJ_G0026066.1 mouse_genomes_project 2 131962560 131967842 - MGP_CBAJ_P0056692 Lrrc57 protein_coding protein_coding MGP_CBAJ_T0056693.1 MGP_CBAJ_G0026066.1 mouse_genomes_project 2 131962560 131967647 - MGP_CBAJ_P0056693 Lrrc57 protein_coding protein_coding MGP_CBAJ_T0056694.1 MGP_CBAJ_G0026066.1 mouse_genomes_project 2 131963142 131966304 - MGP_CBAJ_P0056694 Lrrc57 protein_coding protein_coding MGP_CBAJ_T0056695.1 MGP_CBAJ_G0026066.1 mouse_genomes_project 2 131964315 131967840 - MGP_CBAJ_P0056695 Lrrc57 protein_coding protein_coding MGP_CBAJ_T0056696.1 MGP_CBAJ_G0026066.1 mouse_genomes_project 2 131967149 131967634 - Lrrc57 protein_coding retained_intron MGP_CBAJ_T0100407.1 MGP_CBAJ_G0038662.1 mouse_genomes_project 2 165935536 165935672 - Gm24199 snoRNA snoRNA MGP_CBAJ_T0056964.1 MGP_CBAJ_G0026120.1 mouse_genomes_project 2 136045762 136105261 + Sema6d protein_coding retained_intron MGP_CBAJ_T0056965.1 MGP_CBAJ_G0026120.1 mouse_genomes_project 2 136045762 136676856 + MGP_CBAJ_P0056965 Sema6d protein_coding protein_coding MGP_CBAJ_T0056966.1 MGP_CBAJ_G0026120.1 mouse_genomes_project 2 136104912 136502231 + Sema6d protein_coding processed_transcript MGP_CBAJ_T0056967.1 MGP_CBAJ_G0026120.1 mouse_genomes_project 2 136612183 136671749 + Sema6d protein_coding retained_intron MGP_CBAJ_T0056968.1 MGP_CBAJ_G0026120.1 mouse_genomes_project 2 136612373 136676856 + MGP_CBAJ_P0056968 Sema6d protein_coding protein_coding MGP_CBAJ_T0056969.1 MGP_CBAJ_G0026120.1 mouse_genomes_project 2 136612373 136676856 + MGP_CBAJ_P0056969 Sema6d protein_coding protein_coding MGP_CBAJ_T0056970.1 MGP_CBAJ_G0026120.1 mouse_genomes_project 2 136612373 136676856 + MGP_CBAJ_P0056970 Sema6d protein_coding protein_coding MGP_CBAJ_T0056971.1 MGP_CBAJ_G0026120.1 mouse_genomes_project 2 136612373 136674815 + MGP_CBAJ_P0056971 Sema6d protein_coding protein_coding MGP_CBAJ_T0056972.1 MGP_CBAJ_G0026120.1 mouse_genomes_project 2 136612650 136676857 + MGP_CBAJ_P0056972 Sema6d protein_coding protein_coding MGP_CBAJ_T0056973.1 MGP_CBAJ_G0026120.1 mouse_genomes_project 2 136612678 136674815 + MGP_CBAJ_P0056973 Sema6d protein_coding protein_coding MGP_CBAJ_T0056974.1 MGP_CBAJ_G0026120.1 mouse_genomes_project 2 136662498 136674173 + MGP_CBAJ_P0056974 Sema6d protein_coding protein_coding MGP_CBAJ_T0013266.1 MGP_CBAJ_G0011378.1 mouse_genomes_project 2 17426467 17426540 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000987.1 MGP_CBAJ_G0000919.1 mouse_genomes_project 2 4429817 4441675 + TEC TEC MGP_CBAJ_T0007292.1 MGP_CBAJ_G0005974.1 mouse_genomes_project 2 183365674 183396917 + Gm11468 lincRNA lincRNA MGP_CBAJ_T0055478.1 MGP_CBAJ_G0025743.1 mouse_genomes_project 2 95066218 95067157 - MGP_CBAJ_P0055478 Olfr1157 protein_coding protein_coding MGP_CBAJ_T0057975.1 MGP_CBAJ_G0026377.1 mouse_genomes_project 2 168068888 168070199 - MGP_CBAJ_P0057975 Foxs1 protein_coding protein_coding MGP_CBAJ_T0001027.1 MGP_CBAJ_G0000959.1 mouse_genomes_project 2 33694144 33697915 - TEC TEC MGP_CBAJ_T0100394.1 MGP_CBAJ_G0038649.1 mouse_genomes_project 2 142970739 142970807 + Snord110 snoRNA snoRNA MGP_CBAJ_T0013666.1 MGP_CBAJ_G0011778.1 mouse_genomes_project 2 175909688 175910220 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0054145.1 MGP_CBAJ_G0025399.1 mouse_genomes_project 2 38216417 38217371 - MGP_CBAJ_P0054145 Olfr362 protein_coding protein_coding MGP_CBAJ_T0007282.1 MGP_CBAJ_G0005964.1 mouse_genomes_project 2 179126099 179127174 + Gm14246 lincRNA lincRNA MGP_CBAJ_T0100391.1 MGP_CBAJ_G0038646.1 mouse_genomes_project 2 141281073 141281199 + Gm23172 snoRNA snoRNA MGP_CBAJ_T0052419.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 18920232 19838187 + MGP_CBAJ_P0052419 Etl4 protein_coding protein_coding MGP_CBAJ_T0052420.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19338566 19754130 + MGP_CBAJ_P0052420 Etl4 protein_coding protein_coding MGP_CBAJ_T0052421.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19338566 19905292 + MGP_CBAJ_P0052421 Etl4 protein_coding protein_coding MGP_CBAJ_T0052422.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19394906 19753996 + MGP_CBAJ_P0052422 Etl4 protein_coding protein_coding MGP_CBAJ_T0052423.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19580755 19905281 + MGP_CBAJ_P0052423 Etl4 protein_coding protein_coding MGP_CBAJ_T0052424.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19580755 19905281 + MGP_CBAJ_P0052424 Etl4 protein_coding protein_coding MGP_CBAJ_T0052425.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19598205 19904642 + MGP_CBAJ_P0052425 Etl4 protein_coding protein_coding MGP_CBAJ_T0052426.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19598225 19805228 + Etl4 protein_coding retained_intron MGP_CBAJ_T0052427.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19598242 19905293 + MGP_CBAJ_P0052427 Etl4 protein_coding protein_coding MGP_CBAJ_T0052428.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19598272 19905290 + MGP_CBAJ_P0052428 Etl4 protein_coding unknown_likely_coding MGP_CBAJ_T0052429.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19626436 19802897 + Etl4 protein_coding processed_transcript MGP_CBAJ_T0052430.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19626478 19754394 + Etl4 protein_coding processed_transcript MGP_CBAJ_T0052431.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19641367 19802987 + Etl4 protein_coding processed_transcript MGP_CBAJ_T0052432.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19806660 19837357 + Etl4 protein_coding processed_transcript MGP_CBAJ_T0052433.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19815723 19898187 + Etl4 protein_coding retained_intron MGP_CBAJ_T0052434.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19815723 19879194 + Etl4 protein_coding retained_intron MGP_CBAJ_T0052435.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19815970 19902947 + MGP_CBAJ_P0052435 Etl4 protein_coding protein_coding MGP_CBAJ_T0052436.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19830719 19905111 + MGP_CBAJ_P0052436 Etl4 protein_coding protein_coding MGP_CBAJ_T0052437.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19830719 19905470 + MGP_CBAJ_P0052437 Etl4 protein_coding protein_coding MGP_CBAJ_T0052438.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19893468 19903638 + Etl4 protein_coding processed_transcript MGP_CBAJ_T0052439.1 MGP_CBAJ_G0025097.1 mouse_genomes_project 2 19902210 19905281 + Etl4 protein_coding retained_intron MGP_CBAJ_T0101293.1 MGP_CBAJ_G0039408.1 mouse_genomes_project 2 38381010 38384903 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101294.1 MGP_CBAJ_G0039408.1 mouse_genomes_project 2 38384471 38385416 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0052882.1 MGP_CBAJ_G0025182.1 mouse_genomes_project 2 25299248 25302511 + MGP_CBAJ_P0052882 Lcn11 protein_coding protein_coding MGP_CBAJ_T0056604.1 MGP_CBAJ_G0026054.1 mouse_genomes_project 2 131332770 131341305 + protein_coding retained_intron MGP_CBAJ_T0056605.1 MGP_CBAJ_G0026054.1 mouse_genomes_project 2 131332786 131344949 + protein_coding retained_intron MGP_CBAJ_T0056606.1 MGP_CBAJ_G0026054.1 mouse_genomes_project 2 131332786 131341304 + MGP_CBAJ_P0056606 protein_coding protein_coding MGP_CBAJ_T0056607.1 MGP_CBAJ_G0026054.1 mouse_genomes_project 2 131333896 131335471 + protein_coding retained_intron MGP_CBAJ_T0056608.1 MGP_CBAJ_G0026054.1 mouse_genomes_project 2 131338208 131339788 + protein_coding retained_intron MGP_CBAJ_T0056609.1 MGP_CBAJ_G0026054.1 mouse_genomes_project 2 131340309 131341030 + protein_coding retained_intron MGP_CBAJ_T0004034.1 MGP_CBAJ_G0003567.1 mouse_genomes_project 2 157572507 157584784 - Pcsk2os1 antisense antisense MGP_CBAJ_T0004035.1 MGP_CBAJ_G0003567.1 mouse_genomes_project 2 157574999 157582988 - Pcsk2os1 antisense antisense MGP_CBAJ_T0100359.1 MGP_CBAJ_G0038614.1 mouse_genomes_project 2 44681392 44681524 + Gm24350 snoRNA snoRNA MGP_CBAJ_T0058755.1 MGP_CBAJ_G0026544.1 mouse_genomes_project 2 181097918 181112663 + Rbpjl protein_coding retained_intron MGP_CBAJ_T0058756.1 MGP_CBAJ_G0026544.1 mouse_genomes_project 2 181097971 181113327 + MGP_CBAJ_P0058756 Rbpjl protein_coding protein_coding MGP_CBAJ_T0058757.1 MGP_CBAJ_G0026544.1 mouse_genomes_project 2 181097986 181109080 + Rbpjl protein_coding processed_transcript MGP_CBAJ_T0057896.1 MGP_CBAJ_G0026344.1 mouse_genomes_project 2 166932631 166943453 - MGP_CBAJ_P0057896 Fam110a protein_coding protein_coding MGP_CBAJ_T0057897.1 MGP_CBAJ_G0026344.1 mouse_genomes_project 2 166932631 166937169 - MGP_CBAJ_P0057897 Fam110a protein_coding protein_coding MGP_CBAJ_T0057898.1 MGP_CBAJ_G0026344.1 mouse_genomes_project 2 166932631 166937200 - MGP_CBAJ_P0057898 Fam110a protein_coding protein_coding MGP_CBAJ_T0057899.1 MGP_CBAJ_G0026344.1 mouse_genomes_project 2 166932970 166936628 - MGP_CBAJ_P0057899 Fam110a protein_coding protein_coding MGP_CBAJ_T0053538.1 MGP_CBAJ_G0025288.1 mouse_genomes_project 2 31180278 31194192 - MGP_CBAJ_P0053538 Ptges protein_coding protein_coding MGP_CBAJ_T0053539.1 MGP_CBAJ_G0025288.1 mouse_genomes_project 2 31183089 31192664 - Ptges protein_coding processed_transcript MGP_CBAJ_T0053540.1 MGP_CBAJ_G0025288.1 mouse_genomes_project 2 31183103 31236810 - Ptges protein_coding processed_transcript MGP_CBAJ_T0053541.1 MGP_CBAJ_G0025288.1 mouse_genomes_project 2 31183295 31188345 - Ptges protein_coding processed_transcript MGP_CBAJ_T0056860.1 MGP_CBAJ_G0026091.1 mouse_genomes_project 2 132898353 132903602 + MGP_CBAJ_P0056860 Hypk protein_coding protein_coding MGP_CBAJ_T0056861.1 MGP_CBAJ_G0026091.1 mouse_genomes_project 2 132901787 132903528 + Hypk protein_coding retained_intron MGP_CBAJ_T0056862.1 MGP_CBAJ_G0026091.1 mouse_genomes_project 2 132902057 132903764 + MGP_CBAJ_P0056862 Hypk protein_coding protein_coding MGP_CBAJ_T0056863.1 MGP_CBAJ_G0026091.1 mouse_genomes_project 2 132902218 132903401 + Hypk protein_coding retained_intron MGP_CBAJ_T0056864.1 MGP_CBAJ_G0026091.1 mouse_genomes_project 2 132902228 132903455 + Hypk protein_coding processed_transcript MGP_CBAJ_T0054565.1 MGP_CBAJ_G0025474.1 mouse_genomes_project 2 64125923 64273810 - MGP_CBAJ_P0054565 Pla2r1 protein_coding protein_coding MGP_CBAJ_T0054566.1 MGP_CBAJ_G0025474.1 mouse_genomes_project 2 64128405 64132477 - Pla2r1 protein_coding processed_transcript MGP_CBAJ_T0054567.1 MGP_CBAJ_G0025474.1 mouse_genomes_project 2 64150988 64153523 - Pla2r1 protein_coding retained_intron MGP_CBAJ_T0054568.1 MGP_CBAJ_G0025474.1 mouse_genomes_project 2 64161190 64273810 - Pla2r1 protein_coding retained_intron MGP_CBAJ_T0054569.1 MGP_CBAJ_G0025474.1 mouse_genomes_project 2 64162067 64165330 - Pla2r1 protein_coding retained_intron MGP_CBAJ_T0054570.1 MGP_CBAJ_G0025474.1 mouse_genomes_project 2 64251202 64273810 - Pla2r1 protein_coding retained_intron MGP_CBAJ_T0057284.1 MGP_CBAJ_G0026198.1 mouse_genomes_project 2 142992186 143069716 + MGP_CBAJ_P0057284 Ebf4 protein_coding protein_coding MGP_CBAJ_T0057285.1 MGP_CBAJ_G0026198.1 mouse_genomes_project 2 142992956 143069716 + Ebf4 protein_coding retained_intron MGP_CBAJ_T0057286.1 MGP_CBAJ_G0026198.1 mouse_genomes_project 2 142992956 143069716 + MGP_CBAJ_P0057286 Ebf4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057287.1 MGP_CBAJ_G0026198.1 mouse_genomes_project 2 142992956 143069716 + MGP_CBAJ_P0057287 Ebf4 protein_coding protein_coding MGP_CBAJ_T0057288.1 MGP_CBAJ_G0026198.1 mouse_genomes_project 2 142992956 143069716 + MGP_CBAJ_P0057288 Ebf4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057289.1 MGP_CBAJ_G0026198.1 mouse_genomes_project 2 142992956 143069716 + MGP_CBAJ_P0057289 Ebf4 protein_coding protein_coding MGP_CBAJ_T0055985.1 MGP_CBAJ_G0025888.1 mouse_genomes_project 2 110690782 110698659 + MGP_CBAJ_P0055985 Rag2 protein_coding protein_coding MGP_CBAJ_T0055986.1 MGP_CBAJ_G0025888.1 mouse_genomes_project 2 110690810 110697183 + MGP_CBAJ_P0055986 Rag2 protein_coding protein_coding MGP_CBAJ_T0098161.1 MGP_CBAJ_G0036434.1 mouse_genomes_project 2 116825964 116826234 - Gm24885 ribozyme ribozyme MGP_CBAJ_T0055531.1 MGP_CBAJ_G0025790.1 mouse_genomes_project 2 96797199 96798117 - MGP_CBAJ_P0055531 Olfr1230 protein_coding protein_coding MGP_CBAJ_T0052219.1 MGP_CBAJ_G0025061.1 mouse_genomes_project 2 9854651 9855635 + MGP_CBAJ_P0052219 Ankrd16 protein_coding protein_coding MGP_CBAJ_T0052220.1 MGP_CBAJ_G0025061.1 mouse_genomes_project 2 9855266 9867101 + MGP_CBAJ_P0052220 Ankrd16 protein_coding protein_coding MGP_CBAJ_T0052221.1 MGP_CBAJ_G0025061.1 mouse_genomes_project 2 9855299 9867105 + Ankrd16 protein_coding retained_intron MGP_CBAJ_T0052222.1 MGP_CBAJ_G0025061.1 mouse_genomes_project 2 9855302 9867079 + Ankrd16 protein_coding retained_intron MGP_CBAJ_T0052223.1 MGP_CBAJ_G0025061.1 mouse_genomes_project 2 9855339 9867101 + MGP_CBAJ_P0052223 Ankrd16 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052224.1 MGP_CBAJ_G0025061.1 mouse_genomes_project 2 9855347 9858040 + Ankrd16 protein_coding retained_intron MGP_CBAJ_T0052225.1 MGP_CBAJ_G0025061.1 mouse_genomes_project 2 9856660 9866544 + MGP_CBAJ_P0052225 Ankrd16 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052226.1 MGP_CBAJ_G0025061.1 mouse_genomes_project 2 9860064 9867096 + Ankrd16 protein_coding retained_intron MGP_CBAJ_T0052227.1 MGP_CBAJ_G0025061.1 mouse_genomes_project 2 9860084 9866690 + Ankrd16 protein_coding retained_intron MGP_CBAJ_T0052228.1 MGP_CBAJ_G0025061.1 mouse_genomes_project 2 9860980 9867077 + Ankrd16 protein_coding retained_intron MGP_CBAJ_T0052229.1 MGP_CBAJ_G0025061.1 mouse_genomes_project 2 9861068 9867072 + MGP_CBAJ_P0052229 Ankrd16 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052230.1 MGP_CBAJ_G0025061.1 mouse_genomes_project 2 9862933 9866898 + Ankrd16 protein_coding retained_intron MGP_CBAJ_T0100390.1 MGP_CBAJ_G0038645.1 mouse_genomes_project 2 140070832 140070890 + Gm22889 snoRNA snoRNA MGP_CBAJ_T0013699.1 MGP_CBAJ_G0011811.1 mouse_genomes_project 2 200312933 200313721 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007338.1 MGP_CBAJ_G0006013.1 mouse_genomes_project 2 199859197 199860313 + Gm27032 lincRNA lincRNA MGP_CBAJ_T0058389.1 MGP_CBAJ_G0026459.1 mouse_genomes_project 2 172074943 172210568 + MGP_CBAJ_P0058389 Epb41l1 protein_coding protein_coding MGP_CBAJ_T0058390.1 MGP_CBAJ_G0026459.1 mouse_genomes_project 2 172075082 172210568 + MGP_CBAJ_P0058390 Epb41l1 protein_coding protein_coding MGP_CBAJ_T0058391.1 MGP_CBAJ_G0026459.1 mouse_genomes_project 2 172075086 172169853 + Epb41l1 protein_coding processed_transcript MGP_CBAJ_T0058392.1 MGP_CBAJ_G0026459.1 mouse_genomes_project 2 172075118 172190220 + MGP_CBAJ_P0058392 Epb41l1 protein_coding protein_coding MGP_CBAJ_T0058393.1 MGP_CBAJ_G0026459.1 mouse_genomes_project 2 172075135 172210568 + MGP_CBAJ_P0058393 Epb41l1 protein_coding protein_coding MGP_CBAJ_T0058394.1 MGP_CBAJ_G0026459.1 mouse_genomes_project 2 172075146 172210568 + MGP_CBAJ_P0058394 Epb41l1 protein_coding protein_coding MGP_CBAJ_T0058395.1 MGP_CBAJ_G0026459.1 mouse_genomes_project 2 172135744 172167097 + Epb41l1 protein_coding processed_transcript MGP_CBAJ_T0058396.1 MGP_CBAJ_G0026459.1 mouse_genomes_project 2 172136031 172210568 + MGP_CBAJ_P0058396 Epb41l1 protein_coding protein_coding MGP_CBAJ_T0058397.1 MGP_CBAJ_G0026459.1 mouse_genomes_project 2 172136077 172210568 + MGP_CBAJ_P0058397 Epb41l1 protein_coding protein_coding MGP_CBAJ_T0058398.1 MGP_CBAJ_G0026459.1 mouse_genomes_project 2 172161314 172210568 + MGP_CBAJ_P0058398 Epb41l1 protein_coding protein_coding MGP_CBAJ_T0058399.1 MGP_CBAJ_G0026459.1 mouse_genomes_project 2 172173820 172181473 + Epb41l1 protein_coding processed_transcript MGP_CBAJ_T0058400.1 MGP_CBAJ_G0026459.1 mouse_genomes_project 2 172200910 172207373 + Epb41l1 protein_coding retained_intron MGP_CBAJ_T0058401.1 MGP_CBAJ_G0026459.1 mouse_genomes_project 2 172204750 172207713 + Epb41l1 protein_coding processed_transcript MGP_CBAJ_T0054390.1 MGP_CBAJ_G0025442.1 mouse_genomes_project 2 54750781 54780971 - MGP_CBAJ_P0054390 Nmi protein_coding protein_coding MGP_CBAJ_T0054391.1 MGP_CBAJ_G0025442.1 mouse_genomes_project 2 54750795 54780753 - MGP_CBAJ_P0054391 Nmi protein_coding protein_coding MGP_CBAJ_T0054392.1 MGP_CBAJ_G0025442.1 mouse_genomes_project 2 54750799 54780765 - MGP_CBAJ_P0054392 Nmi protein_coding protein_coding MGP_CBAJ_T0054393.1 MGP_CBAJ_G0025442.1 mouse_genomes_project 2 54750819 54757177 - MGP_CBAJ_P0054393 Nmi protein_coding protein_coding MGP_CBAJ_T0054394.1 MGP_CBAJ_G0025442.1 mouse_genomes_project 2 54760981 54781228 - MGP_CBAJ_P0054394 Nmi protein_coding protein_coding MGP_CBAJ_T0054395.1 MGP_CBAJ_G0025442.1 mouse_genomes_project 2 54765261 54780721 - Nmi protein_coding retained_intron MGP_CBAJ_T0055505.1 MGP_CBAJ_G0025768.1 mouse_genomes_project 2 96169463 96170396 - MGP_CBAJ_P0055505 Olfr1199 protein_coding protein_coding MGP_CBAJ_T0017613.1 MGP_CBAJ_G0015210.1 mouse_genomes_project 2 141578345 141583171 + Gm14027 processed_transcript processed_transcript MGP_CBAJ_T0054406.1 MGP_CBAJ_G0025445.1 mouse_genomes_project 2 54975649 55198873 - MGP_CBAJ_P0054406 Neb protein_coding protein_coding MGP_CBAJ_T0054407.1 MGP_CBAJ_G0025445.1 mouse_genomes_project 2 54975664 55193484 - MGP_CBAJ_P0054407 Neb protein_coding protein_coding MGP_CBAJ_T0054408.1 MGP_CBAJ_G0025445.1 mouse_genomes_project 2 54975664 55068434 - MGP_CBAJ_P0054408 Neb protein_coding protein_coding MGP_CBAJ_T0054409.1 MGP_CBAJ_G0025445.1 mouse_genomes_project 2 54976118 54996929 - Neb protein_coding processed_transcript MGP_CBAJ_T0054410.1 MGP_CBAJ_G0025445.1 mouse_genomes_project 2 54976259 55189202 - MGP_CBAJ_P0054410 Neb protein_coding unknown_likely_coding MGP_CBAJ_T0054411.1 MGP_CBAJ_G0025445.1 mouse_genomes_project 2 54976262 55018780 - MGP_CBAJ_P0054411 Neb protein_coding protein_coding MGP_CBAJ_T0054412.1 MGP_CBAJ_G0025445.1 mouse_genomes_project 2 54995354 55001996 - Neb protein_coding processed_transcript MGP_CBAJ_T0054413.1 MGP_CBAJ_G0025445.1 mouse_genomes_project 2 55015942 55018359 - Neb protein_coding processed_transcript MGP_CBAJ_T0054414.1 MGP_CBAJ_G0025445.1 mouse_genomes_project 2 55020211 55037166 - MGP_CBAJ_P0054414 Neb protein_coding protein_coding MGP_CBAJ_T0054415.1 MGP_CBAJ_G0025445.1 mouse_genomes_project 2 55066479 55107800 - MGP_CBAJ_P0054415 Neb protein_coding protein_coding MGP_CBAJ_T0054416.1 MGP_CBAJ_G0025445.1 mouse_genomes_project 2 55177997 55194112 - Neb protein_coding processed_transcript MGP_CBAJ_T0054417.1 MGP_CBAJ_G0025445.1 mouse_genomes_project 2 55187185 55198873 - Neb protein_coding processed_transcript MGP_CBAJ_T0003913.1 MGP_CBAJ_G0003487.1 mouse_genomes_project 2 70238448 70250298 - Gm13617 antisense antisense MGP_CBAJ_T0058533.1 MGP_CBAJ_G0026484.1 mouse_genomes_project 2 174133562 174183414 - MGP_CBAJ_P0058533 D630003M21Rik protein_coding protein_coding MGP_CBAJ_T0058534.1 MGP_CBAJ_G0026484.1 mouse_genomes_project 2 174137347 174183414 - MGP_CBAJ_P0058534 D630003M21Rik protein_coding protein_coding MGP_CBAJ_T0058535.1 MGP_CBAJ_G0026484.1 mouse_genomes_project 2 174146982 174183414 - MGP_CBAJ_P0058535 D630003M21Rik protein_coding protein_coding MGP_CBAJ_T0055492.1 MGP_CBAJ_G0025756.1 mouse_genomes_project 2 95690264 95691188 - MGP_CBAJ_P0055492 Olfr1179 protein_coding protein_coding MGP_CBAJ_T0056146.1 MGP_CBAJ_G0025922.1 mouse_genomes_project 2 114311756 114401969 + MGP_CBAJ_P0056146 Ccdc73 protein_coding protein_coding MGP_CBAJ_T0056147.1 MGP_CBAJ_G0025922.1 mouse_genomes_project 2 114330583 114464680 + MGP_CBAJ_P0056147 Ccdc73 protein_coding protein_coding MGP_CBAJ_T0056148.1 MGP_CBAJ_G0025922.1 mouse_genomes_project 2 114356478 114451994 + MGP_CBAJ_P0056148 Ccdc73 protein_coding protein_coding MGP_CBAJ_T0056149.1 MGP_CBAJ_G0025922.1 mouse_genomes_project 2 114454150 114483021 + MGP_CBAJ_P0056149 Ccdc73 protein_coding protein_coding MGP_CBAJ_T0056154.1 MGP_CBAJ_G0025922.1 mouse_genomes_project 2 114482297 114483074 + Ccdc73 protein_coding processed_transcript MGP_CBAJ_T0059361.1 MGP_CBAJ_G0026693.1 mouse_genomes_project 2 199606564 199650648 - MGP_CBAJ_P0059361 Dido1 protein_coding protein_coding MGP_CBAJ_T0059362.1 MGP_CBAJ_G0026693.1 mouse_genomes_project 2 199616888 199658297 - MGP_CBAJ_P0059362 Dido1 protein_coding protein_coding MGP_CBAJ_T0059363.1 MGP_CBAJ_G0026693.1 mouse_genomes_project 2 199616890 199624309 - MGP_CBAJ_P0059363 Dido1 protein_coding protein_coding MGP_CBAJ_T0059364.1 MGP_CBAJ_G0026693.1 mouse_genomes_project 2 199617813 199650648 - MGP_CBAJ_P0059364 Dido1 protein_coding protein_coding MGP_CBAJ_T0059365.1 MGP_CBAJ_G0026693.1 mouse_genomes_project 2 199629410 199658297 - MGP_CBAJ_P0059365 Dido1 protein_coding protein_coding MGP_CBAJ_T0059366.1 MGP_CBAJ_G0026693.1 mouse_genomes_project 2 199629425 199650648 - MGP_CBAJ_P0059366 Dido1 protein_coding protein_coding MGP_CBAJ_T0059367.1 MGP_CBAJ_G0026693.1 mouse_genomes_project 2 199633374 199650290 - Dido1 protein_coding processed_transcript MGP_CBAJ_T0054124.1 MGP_CBAJ_G0025380.1 mouse_genomes_project 2 37590026 37590965 + MGP_CBAJ_P0054124 Olfr342 protein_coding protein_coding MGP_CBAJ_T0057765.1 MGP_CBAJ_G0026304.1 mouse_genomes_project 2 162559229 162562302 - MGP_CBAJ_P0057765 Foxa2 protein_coding protein_coding MGP_CBAJ_T0057766.1 MGP_CBAJ_G0026304.1 mouse_genomes_project 2 162559229 162563323 - MGP_CBAJ_P0057766 Foxa2 protein_coding protein_coding MGP_CBAJ_T0057767.1 MGP_CBAJ_G0026304.1 mouse_genomes_project 2 162559894 162563250 - MGP_CBAJ_P0057767 Foxa2 protein_coding protein_coding MGP_CBAJ_T0057768.1 MGP_CBAJ_G0026304.1 mouse_genomes_project 2 162560592 162561818 - Foxa2 protein_coding processed_transcript MGP_CBAJ_T0013438.1 MGP_CBAJ_G0011550.1 mouse_genomes_project 2 84412915 84413413 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0056452.1 MGP_CBAJ_G0026020.1 mouse_genomes_project 2 129953365 129976545 + MGP_CBAJ_P0056452 Knstrn protein_coding protein_coding MGP_CBAJ_T0056453.1 MGP_CBAJ_G0026020.1 mouse_genomes_project 2 129953594 129973025 + MGP_CBAJ_P0056453 Knstrn protein_coding nonsense_mediated_decay MGP_CBAJ_T0056454.1 MGP_CBAJ_G0026020.1 mouse_genomes_project 2 129953594 129973093 + MGP_CBAJ_P0056454 Knstrn protein_coding nonsense_mediated_decay MGP_CBAJ_T0056455.1 MGP_CBAJ_G0026020.1 mouse_genomes_project 2 129953595 129973002 + MGP_CBAJ_P0056455 Knstrn protein_coding protein_coding MGP_CBAJ_T0056456.1 MGP_CBAJ_G0026020.1 mouse_genomes_project 2 129953616 129973486 + MGP_CBAJ_P0056456 Knstrn protein_coding protein_coding MGP_CBAJ_T0056457.1 MGP_CBAJ_G0026020.1 mouse_genomes_project 2 129953639 129969884 + MGP_CBAJ_P0056457 Knstrn protein_coding protein_coding MGP_CBAJ_T0056458.1 MGP_CBAJ_G0026020.1 mouse_genomes_project 2 129953658 129972912 + MGP_CBAJ_P0056458 Knstrn protein_coding nonsense_mediated_decay MGP_CBAJ_T0056459.1 MGP_CBAJ_G0026020.1 mouse_genomes_project 2 129970481 129975992 + MGP_CBAJ_P0056459 Knstrn protein_coding nonsense_mediated_decay MGP_CBAJ_T0056460.1 MGP_CBAJ_G0026020.1 mouse_genomes_project 2 129972918 129996587 + MGP_CBAJ_P0056460 Knstrn protein_coding nonsense_mediated_decay MGP_CBAJ_T0004069.1 MGP_CBAJ_G0003597.1 mouse_genomes_project 2 174611647 174612558 - Gm14205 antisense antisense MGP_CBAJ_T0054727.1 MGP_CBAJ_G0025501.1 mouse_genomes_project 2 72033095 72287145 + B3galt1 protein_coding processed_transcript MGP_CBAJ_T0054728.1 MGP_CBAJ_G0025501.1 mouse_genomes_project 2 72217366 72629793 + MGP_CBAJ_P0054728 B3galt1 protein_coding protein_coding MGP_CBAJ_T0054729.1 MGP_CBAJ_G0025501.1 mouse_genomes_project 2 72614093 72632157 + MGP_CBAJ_P0054729 B3galt1 protein_coding protein_coding MGP_CBAJ_T0054730.1 MGP_CBAJ_G0025501.1 mouse_genomes_project 2 72629355 72634370 + MGP_CBAJ_P0054730 B3galt1 protein_coding protein_coding MGP_CBAJ_T0099122.1 MGP_CBAJ_G0037377.1 mouse_genomes_project 2 128189565 128189729 + Gm25189 snRNA snRNA MGP_CBAJ_T0055435.1 MGP_CBAJ_G0025710.1 mouse_genomes_project 2 94310913 94311691 + MGP_CBAJ_P0055435 protein_coding protein_coding MGP_CBAJ_T0003841.1 MGP_CBAJ_G0003434.1 mouse_genomes_project 2 24730832 24738538 + Grin1os antisense antisense MGP_CBAJ_T0057721.1 MGP_CBAJ_G0026295.1 mouse_genomes_project 2 160131040 160148370 - MGP_CBAJ_P0057721 Crnkl1 protein_coding protein_coding MGP_CBAJ_T0057722.1 MGP_CBAJ_G0026295.1 mouse_genomes_project 2 160143749 160144748 - Crnkl1 protein_coding retained_intron MGP_CBAJ_T0057723.1 MGP_CBAJ_G0026295.1 mouse_genomes_project 2 160145328 160148070 - Crnkl1 protein_coding retained_intron MGP_CBAJ_T0052042.1 MGP_CBAJ_G0025033.1 mouse_genomes_project 2 2368475 2479084 + MGP_CBAJ_P0052042 Ccdc3 protein_coding protein_coding MGP_CBAJ_T0017510.1 MGP_CBAJ_G0015156.1 mouse_genomes_project 2 36532424 36541589 - Gm13446 processed_transcript processed_transcript MGP_CBAJ_T0017511.1 MGP_CBAJ_G0015156.1 mouse_genomes_project 2 36537735 36541372 - Gm13446 processed_transcript processed_transcript MGP_CBAJ_T0013619.1 MGP_CBAJ_G0011731.1 mouse_genomes_project 2 161225905 161226508 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0052881.1 MGP_CBAJ_G0025181.1 mouse_genomes_project 2 25287800 25290331 + MGP_CBAJ_P0052881 Lcn3 protein_coding protein_coding MGP_CBAJ_T0056290.1 MGP_CBAJ_G0025972.1 mouse_genomes_project 2 122255439 122255996 - MGP_CBAJ_P0056290 protein_coding protein_coding MGP_CBAJ_T0055532.1 MGP_CBAJ_G0025791.1 mouse_genomes_project 2 96803497 96804439 - MGP_CBAJ_P0055532 Olfr1231 protein_coding protein_coding MGP_CBAJ_T0017478.1 MGP_CBAJ_G0015137.1 mouse_genomes_project 2 12926846 12951625 + Gm13266 processed_transcript retained_intron MGP_CBAJ_T0017479.1 MGP_CBAJ_G0015137.1 mouse_genomes_project 2 12926846 12962876 + Gm13266 processed_transcript lincRNA MGP_CBAJ_T0017480.1 MGP_CBAJ_G0015137.1 mouse_genomes_project 2 12926854 12951445 + Gm13266 processed_transcript lincRNA MGP_CBAJ_T0052294.1 MGP_CBAJ_G0025072.1 mouse_genomes_project 2 12409987 12479507 + MGP_CBAJ_P0052294 Stam protein_coding protein_coding MGP_CBAJ_T0052295.1 MGP_CBAJ_G0025072.1 mouse_genomes_project 2 12409997 12455930 + Stam protein_coding processed_transcript MGP_CBAJ_T0052296.1 MGP_CBAJ_G0025072.1 mouse_genomes_project 2 12410078 12474238 + MGP_CBAJ_P0052296 Stam protein_coding protein_coding MGP_CBAJ_T0052297.1 MGP_CBAJ_G0025072.1 mouse_genomes_project 2 12410111 12477413 + MGP_CBAJ_P0052297 Stam protein_coding nonsense_mediated_decay MGP_CBAJ_T0052298.1 MGP_CBAJ_G0025072.1 mouse_genomes_project 2 12410316 12456390 + MGP_CBAJ_P0052298 Stam protein_coding protein_coding MGP_CBAJ_T0052299.1 MGP_CBAJ_G0025072.1 mouse_genomes_project 2 12455653 12456485 + Stam protein_coding retained_intron MGP_CBAJ_T0052300.1 MGP_CBAJ_G0025072.1 mouse_genomes_project 2 12456363 12458707 + Stam protein_coding processed_transcript MGP_CBAJ_T0052301.1 MGP_CBAJ_G0025072.1 mouse_genomes_project 2 12458160 12469055 + Stam protein_coding retained_intron MGP_CBAJ_T0052302.1 MGP_CBAJ_G0025072.1 mouse_genomes_project 2 12461438 12468997 + Stam protein_coding retained_intron MGP_CBAJ_T0055365.1 MGP_CBAJ_G0025642.1 mouse_genomes_project 2 92173111 92174056 + MGP_CBAJ_P0055365 Olfr998 protein_coding protein_coding MGP_CBAJ_T0013569.1 MGP_CBAJ_G0011681.1 mouse_genomes_project 2 141042406 141043387 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007221.1 MGP_CBAJ_G0005915.1 mouse_genomes_project 2 140651535 140669024 + Gm14009 lincRNA lincRNA MGP_CBAJ_T0055540.1 MGP_CBAJ_G0025797.1 mouse_genomes_project 2 96970023 96970968 - MGP_CBAJ_P0055540 Olfr1240 protein_coding protein_coding MGP_CBAJ_T0055399.1 MGP_CBAJ_G0025675.1 mouse_genomes_project 2 93011144 93012072 - MGP_CBAJ_P0055399 Olfr1053 protein_coding protein_coding MGP_CBAJ_T0003983.1 MGP_CBAJ_G0003532.1 mouse_genomes_project 2 124603390 124612355 + C130080G10Rik antisense antisense MGP_CBAJ_T0003984.1 MGP_CBAJ_G0003532.1 mouse_genomes_project 2 124603451 124612332 + C130080G10Rik antisense antisense MGP_CBAJ_T0003985.1 MGP_CBAJ_G0003532.1 mouse_genomes_project 2 124604292 124611820 + C130080G10Rik antisense antisense MGP_CBAJ_T0003986.1 MGP_CBAJ_G0003532.1 mouse_genomes_project 2 124607053 124612124 + C130080G10Rik antisense antisense MGP_CBAJ_T0003987.1 MGP_CBAJ_G0003532.1 mouse_genomes_project 2 124607078 124615762 + C130080G10Rik antisense antisense MGP_CBAJ_T0053241.1 MGP_CBAJ_G0025247.1 mouse_genomes_project 2 28857292 29000813 - MGP_CBAJ_P0053241 Cfap77 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053242.1 MGP_CBAJ_G0025247.1 mouse_genomes_project 2 28857296 29000828 - MGP_CBAJ_P0053242 Cfap77 protein_coding protein_coding MGP_CBAJ_T0053243.1 MGP_CBAJ_G0025247.1 mouse_genomes_project 2 28858176 28979551 - Cfap77 protein_coding processed_transcript MGP_CBAJ_T0053244.1 MGP_CBAJ_G0025247.1 mouse_genomes_project 2 28888719 29000855 - MGP_CBAJ_P0053244 Cfap77 protein_coding protein_coding MGP_CBAJ_T0053245.1 MGP_CBAJ_G0025247.1 mouse_genomes_project 2 28997685 29000848 - Cfap77 protein_coding processed_transcript MGP_CBAJ_T0055878.1 MGP_CBAJ_G0025868.1 mouse_genomes_project 2 100484727 100491540 - MGP_CBAJ_P0055878 Slc35c1 protein_coding protein_coding MGP_CBAJ_T0055879.1 MGP_CBAJ_G0025868.1 mouse_genomes_project 2 100484730 100492284 - MGP_CBAJ_P0055879 Slc35c1 protein_coding protein_coding MGP_CBAJ_T0055880.1 MGP_CBAJ_G0025868.1 mouse_genomes_project 2 100490431 100491455 - MGP_CBAJ_P0055880 Slc35c1 protein_coding protein_coding MGP_CBAJ_T0056286.1 MGP_CBAJ_G0025968.1 mouse_genomes_project 2 122040642 122041581 + MGP_CBAJ_P0056286 Olfr1301 protein_coding protein_coding MGP_CBAJ_T0058685.1 MGP_CBAJ_G0026518.1 mouse_genomes_project 2 180063723 180073996 + MGP_CBAJ_P0058685 R3hdml protein_coding protein_coding MGP_CBAJ_T0057527.1 MGP_CBAJ_G0026251.1 mouse_genomes_project 2 147674523 147736100 - MGP_CBAJ_P0057527 Hao1 protein_coding protein_coding MGP_CBAJ_T0057528.1 MGP_CBAJ_G0026251.1 mouse_genomes_project 2 147705077 147736039 - Hao1 protein_coding processed_transcript MGP_CBAJ_T0010240.1 MGP_CBAJ_G0008378.1 mouse_genomes_project 2 8395932 8396016 + Mir466g miRNA miRNA MGP_CBAJ_T0011370.1 MGP_CBAJ_G0009508.1 mouse_genomes_project 2 47226935 47227012 + Gm27645 misc_RNA misc_RNA MGP_CBAJ_T0010349.1 MGP_CBAJ_G0008487.1 mouse_genomes_project 2 174200513 174200575 - Mir7685 miRNA miRNA MGP_CBAJ_T0013639.1 MGP_CBAJ_G0011751.1 mouse_genomes_project 2 167504871 167505179 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101297.1 MGP_CBAJ_G0039411.1 mouse_genomes_project 2 95446793 95451483 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0055491.1 MGP_CBAJ_G0025755.1 mouse_genomes_project 2 95672650 95673622 + MGP_CBAJ_P0055491 Olfr1178 protein_coding protein_coding MGP_CBAJ_T0013291.1 MGP_CBAJ_G0011403.1 mouse_genomes_project 2 25033315 25033556 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055946.1 MGP_CBAJ_G0025880.1 mouse_genomes_project 2 102173999 102175239 - MGP_CBAJ_P0055946 protein_coding protein_coding MGP_CBAJ_T0055947.1 MGP_CBAJ_G0025880.1 mouse_genomes_project 2 102174005 102175391 - MGP_CBAJ_P0055947 protein_coding protein_coding MGP_CBAJ_T0004093.1 MGP_CBAJ_G0003613.1 mouse_genomes_project 2 184165204 184165974 + Gm17096 antisense antisense MGP_CBAJ_T0013240.1 MGP_CBAJ_G0011352.1 mouse_genomes_project 2 6990288 6990718 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0058718.1 MGP_CBAJ_G0026528.1 mouse_genomes_project 2 180611320 180644698 + MGP_CBAJ_P0058718 Pabpc1l protein_coding protein_coding MGP_CBAJ_T0058719.1 MGP_CBAJ_G0026528.1 mouse_genomes_project 2 180619023 180634100 + Pabpc1l protein_coding processed_transcript MGP_CBAJ_T0058720.1 MGP_CBAJ_G0026528.1 mouse_genomes_project 2 180628707 180634327 + Pabpc1l protein_coding processed_transcript MGP_CBAJ_T0058721.1 MGP_CBAJ_G0026528.1 mouse_genomes_project 2 180641558 180644698 + Pabpc1l protein_coding processed_transcript MGP_CBAJ_T0058722.1 MGP_CBAJ_G0026528.1 mouse_genomes_project 2 180642086 180644327 + Pabpc1l protein_coding processed_transcript MGP_CBAJ_T0055285.1 MGP_CBAJ_G0025615.1 mouse_genomes_project 2 91150425 91157915 - MGP_CBAJ_P0055285 Tmx2 protein_coding protein_coding MGP_CBAJ_T0055286.1 MGP_CBAJ_G0025615.1 mouse_genomes_project 2 91150425 91157205 - MGP_CBAJ_P0055286 Tmx2 protein_coding protein_coding MGP_CBAJ_T0055287.1 MGP_CBAJ_G0025615.1 mouse_genomes_project 2 91150426 91157143 - MGP_CBAJ_P0055287 Tmx2 protein_coding protein_coding MGP_CBAJ_T0055288.1 MGP_CBAJ_G0025615.1 mouse_genomes_project 2 91151372 91157136 - Tmx2 protein_coding processed_transcript MGP_CBAJ_T0055289.1 MGP_CBAJ_G0025615.1 mouse_genomes_project 2 91151450 91157130 - Tmx2 protein_coding processed_transcript MGP_CBAJ_T0055290.1 MGP_CBAJ_G0025615.1 mouse_genomes_project 2 91155202 91158227 - MGP_CBAJ_P0055290 Tmx2 protein_coding protein_coding MGP_CBAJ_T0055474.1 MGP_CBAJ_G0025739.1 mouse_genomes_project 2 95009400 95010357 + MGP_CBAJ_P0055474 Olfr1153 protein_coding protein_coding MGP_CBAJ_T0055510.1 MGP_CBAJ_G0025773.1 mouse_genomes_project 2 96398019 96398955 - MGP_CBAJ_P0055510 Olfr1211 protein_coding protein_coding MGP_CBAJ_T0054660.1 MGP_CBAJ_G0025489.1 mouse_genomes_project 2 69326186 69482348 - MGP_CBAJ_P0054660 Cobll1 protein_coding protein_coding MGP_CBAJ_T0054661.1 MGP_CBAJ_G0025489.1 mouse_genomes_project 2 69326197 69482443 - MGP_CBAJ_P0054661 Cobll1 protein_coding protein_coding MGP_CBAJ_T0054662.1 MGP_CBAJ_G0025489.1 mouse_genomes_project 2 69326197 69482348 - MGP_CBAJ_P0054662 Cobll1 protein_coding protein_coding MGP_CBAJ_T0054663.1 MGP_CBAJ_G0025489.1 mouse_genomes_project 2 69326197 69482348 - MGP_CBAJ_P0054663 Cobll1 protein_coding protein_coding MGP_CBAJ_T0054664.1 MGP_CBAJ_G0025489.1 mouse_genomes_project 2 69326197 69482295 - MGP_CBAJ_P0054664 Cobll1 protein_coding protein_coding MGP_CBAJ_T0054665.1 MGP_CBAJ_G0025489.1 mouse_genomes_project 2 69337054 69343775 - Cobll1 protein_coding processed_transcript MGP_CBAJ_T0054666.1 MGP_CBAJ_G0025489.1 mouse_genomes_project 2 69363821 69482766 - MGP_CBAJ_P0054666 Cobll1 protein_coding protein_coding MGP_CBAJ_T0054667.1 MGP_CBAJ_G0025489.1 mouse_genomes_project 2 69371630 69482818 - MGP_CBAJ_P0054667 Cobll1 protein_coding protein_coding MGP_CBAJ_T0054668.1 MGP_CBAJ_G0025489.1 mouse_genomes_project 2 69374200 69479717 - Cobll1 protein_coding processed_transcript MGP_CBAJ_T0054669.1 MGP_CBAJ_G0025489.1 mouse_genomes_project 2 69374233 69482295 - MGP_CBAJ_P0054669 Cobll1 protein_coding protein_coding MGP_CBAJ_T0054670.1 MGP_CBAJ_G0025489.1 mouse_genomes_project 2 69385618 69482769 - Cobll1 protein_coding processed_transcript MGP_CBAJ_T0054671.1 MGP_CBAJ_G0025489.1 mouse_genomes_project 2 69388175 69483125 - Cobll1 protein_coding processed_transcript MGP_CBAJ_T0054672.1 MGP_CBAJ_G0025489.1 mouse_genomes_project 2 69388339 69482196 - Cobll1 protein_coding processed_transcript MGP_CBAJ_T0055519.1 MGP_CBAJ_G0025780.1 mouse_genomes_project 2 96544932 96545868 - MGP_CBAJ_P0055519 Olfr1218 protein_coding protein_coding MGP_CBAJ_T0055606.1 MGP_CBAJ_G0025831.1 mouse_genomes_project 2 98544621 98588068 + MGP_CBAJ_P0055606 Agbl2 protein_coding protein_coding MGP_CBAJ_T0055607.1 MGP_CBAJ_G0025831.1 mouse_genomes_project 2 98544621 98608380 + MGP_CBAJ_P0055607 Agbl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0055608.1 MGP_CBAJ_G0025831.1 mouse_genomes_project 2 98544622 98581493 + MGP_CBAJ_P0055608 Agbl2 protein_coding protein_coding MGP_CBAJ_T0055609.1 MGP_CBAJ_G0025831.1 mouse_genomes_project 2 98544638 98587055 + MGP_CBAJ_P0055609 Agbl2 protein_coding protein_coding MGP_CBAJ_T0055610.1 MGP_CBAJ_G0025831.1 mouse_genomes_project 2 98545143 98585093 + MGP_CBAJ_P0055610 Agbl2 protein_coding protein_coding MGP_CBAJ_T0055611.1 MGP_CBAJ_G0025831.1 mouse_genomes_project 2 98545170 98603223 + Agbl2 protein_coding processed_transcript MGP_CBAJ_T0055612.1 MGP_CBAJ_G0025831.1 mouse_genomes_project 2 98545478 98587055 + MGP_CBAJ_P0055612 Agbl2 protein_coding protein_coding MGP_CBAJ_T0055613.1 MGP_CBAJ_G0025831.1 mouse_genomes_project 2 98545931 98586562 + MGP_CBAJ_P0055613 Agbl2 protein_coding unknown_likely_coding MGP_CBAJ_T0055614.1 MGP_CBAJ_G0025831.1 mouse_genomes_project 2 98545965 98561635 + Agbl2 protein_coding processed_transcript MGP_CBAJ_T0058723.1 MGP_CBAJ_G0026529.1 mouse_genomes_project 2 180650523 180662588 - Tomm34 protein_coding retained_intron MGP_CBAJ_T0058724.1 MGP_CBAJ_G0026529.1 mouse_genomes_project 2 180650523 180668083 - MGP_CBAJ_P0058724 Tomm34 protein_coding protein_coding MGP_CBAJ_T0058725.1 MGP_CBAJ_G0026529.1 mouse_genomes_project 2 180650523 180668016 - MGP_CBAJ_P0058725 Tomm34 protein_coding protein_coding MGP_CBAJ_T0059283.1 MGP_CBAJ_G0026674.1 mouse_genomes_project 2 198721930 198808916 - MGP_CBAJ_P0059283 Taf4 protein_coding protein_coding MGP_CBAJ_T0059284.1 MGP_CBAJ_G0026674.1 mouse_genomes_project 2 198723217 198803517 - MGP_CBAJ_P0059284 Taf4 protein_coding unknown_likely_coding MGP_CBAJ_T0059285.1 MGP_CBAJ_G0026674.1 mouse_genomes_project 2 198733843 198734826 - Taf4 protein_coding processed_transcript MGP_CBAJ_T0059286.1 MGP_CBAJ_G0026674.1 mouse_genomes_project 2 198734621 198741917 - Taf4 protein_coding processed_transcript MGP_CBAJ_T0013560.1 MGP_CBAJ_G0011672.1 mouse_genomes_project 2 132840013 132840246 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013642.1 MGP_CBAJ_G0011754.1 mouse_genomes_project 2 167846345 167846946 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0059249.1 MGP_CBAJ_G0026664.1 mouse_genomes_project 2 192946607 192949642 - MGP_CBAJ_P0059249 Atp5e protein_coding protein_coding MGP_CBAJ_T0059250.1 MGP_CBAJ_G0026664.1 mouse_genomes_project 2 192946610 192949586 - Atp5e protein_coding retained_intron MGP_CBAJ_T0059251.1 MGP_CBAJ_G0026664.1 mouse_genomes_project 2 192948052 192949626 - Atp5e protein_coding retained_intron MGP_CBAJ_T0055428.1 MGP_CBAJ_G0025703.1 mouse_genomes_project 2 94032601 94033540 - MGP_CBAJ_P0055428 Olfr1109 protein_coding protein_coding MGP_CBAJ_T0011394.1 MGP_CBAJ_G0009532.1 mouse_genomes_project 2 181544043 181544359 + Gm22596 misc_RNA misc_RNA MGP_CBAJ_T0056358.1 MGP_CBAJ_G0025999.1 mouse_genomes_project 2 124740245 124748207 - MGP_CBAJ_P0056358 Zfp770 protein_coding protein_coding MGP_CBAJ_T0056359.1 MGP_CBAJ_G0025999.1 mouse_genomes_project 2 124745297 124748178 - Zfp770 protein_coding processed_transcript MGP_CBAJ_T0003824.1 MGP_CBAJ_G0003419.1 mouse_genomes_project 2 10431530 10441740 + E030013I19Rik antisense antisense MGP_CBAJ_T0003825.1 MGP_CBAJ_G0003419.1 mouse_genomes_project 2 10431903 10442755 + E030013I19Rik antisense antisense MGP_CBAJ_T0058731.1 MGP_CBAJ_G0026531.1 mouse_genomes_project 2 180775764 180783256 - MGP_CBAJ_P0058731 Kcns1 protein_coding protein_coding MGP_CBAJ_T0058077.1 MGP_CBAJ_G0026403.1 mouse_genomes_project 2 169474055 169482093 + MGP_CBAJ_P0058077 Bpifa3 protein_coding protein_coding MGP_CBAJ_T0058078.1 MGP_CBAJ_G0026403.1 mouse_genomes_project 2 169474055 169482093 + MGP_CBAJ_P0058078 Bpifa3 protein_coding protein_coding MGP_CBAJ_T0058079.1 MGP_CBAJ_G0026403.1 mouse_genomes_project 2 169479283 169481356 + MGP_CBAJ_P0058079 Bpifa3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0003895.1 MGP_CBAJ_G0003474.1 mouse_genomes_project 2 46092286 46098333 - Arhgap15os antisense antisense MGP_CBAJ_T0017636.1 MGP_CBAJ_G0015225.1 mouse_genomes_project 2 172413987 172422489 - 4930405A21Rik processed_transcript processed_transcript MGP_CBAJ_T0017637.1 MGP_CBAJ_G0015225.1 mouse_genomes_project 2 172415399 172422406 - 4930405A21Rik processed_transcript retained_intron MGP_CBAJ_T0054892.1 MGP_CBAJ_G0025533.1 mouse_genomes_project 2 76233903 76348224 - MGP_CBAJ_P0054892 Slc25a12 protein_coding protein_coding MGP_CBAJ_T0054893.1 MGP_CBAJ_G0025533.1 mouse_genomes_project 2 76237530 76348008 - MGP_CBAJ_P0054893 Slc25a12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054894.1 MGP_CBAJ_G0025533.1 mouse_genomes_project 2 76237917 76257432 - Slc25a12 protein_coding processed_transcript MGP_CBAJ_T0054895.1 MGP_CBAJ_G0025533.1 mouse_genomes_project 2 76242395 76245624 - Slc25a12 protein_coding retained_intron MGP_CBAJ_T0054896.1 MGP_CBAJ_G0025533.1 mouse_genomes_project 2 76276908 76299905 - Slc25a12 protein_coding processed_transcript MGP_CBAJ_T0054897.1 MGP_CBAJ_G0025533.1 mouse_genomes_project 2 76300804 76315261 - Slc25a12 protein_coding processed_transcript MGP_CBAJ_T0054898.1 MGP_CBAJ_G0025533.1 mouse_genomes_project 2 76315118 76319057 - Slc25a12 protein_coding processed_transcript MGP_CBAJ_T0054062.1 MGP_CBAJ_G0025364.1 mouse_genomes_project 2 36266691 36289686 - MGP_CBAJ_P0054062 Stom protein_coding protein_coding MGP_CBAJ_T0054063.1 MGP_CBAJ_G0025364.1 mouse_genomes_project 2 36268046 36273211 - Stom protein_coding retained_intron MGP_CBAJ_T0057648.1 MGP_CBAJ_G0026279.1 mouse_genomes_project 2 158095682 158142329 + MGP_CBAJ_P0057648 Banf2 protein_coding protein_coding MGP_CBAJ_T0057649.1 MGP_CBAJ_G0026279.1 mouse_genomes_project 2 158095725 158142329 + MGP_CBAJ_P0057649 Banf2 protein_coding protein_coding MGP_CBAJ_T0017662.1 MGP_CBAJ_G0015235.1 mouse_genomes_project 2 184896955 184978629 + Gm11476 processed_transcript processed_transcript MGP_CBAJ_T0058750.1 MGP_CBAJ_G0026543.1 mouse_genomes_project 2 181079055 181099428 - MGP_CBAJ_P0058750 Matn4 protein_coding protein_coding MGP_CBAJ_T0058751.1 MGP_CBAJ_G0026543.1 mouse_genomes_project 2 181079055 181099430 - MGP_CBAJ_P0058751 Matn4 protein_coding protein_coding MGP_CBAJ_T0058752.1 MGP_CBAJ_G0026543.1 mouse_genomes_project 2 181079055 181099976 - MGP_CBAJ_P0058752 Matn4 protein_coding protein_coding MGP_CBAJ_T0058753.1 MGP_CBAJ_G0026543.1 mouse_genomes_project 2 181079055 181099428 - MGP_CBAJ_P0058753 Matn4 protein_coding protein_coding MGP_CBAJ_T0058754.1 MGP_CBAJ_G0026543.1 mouse_genomes_project 2 181083693 181099429 - Matn4 protein_coding retained_intron MGP_CBAJ_T0004009.1 MGP_CBAJ_G0003551.1 mouse_genomes_project 2 141971521 141977372 + Il1bos antisense antisense MGP_CBAJ_T0004010.1 MGP_CBAJ_G0003551.1 mouse_genomes_project 2 141971526 141977357 + Il1bos antisense antisense MGP_CBAJ_T0004011.1 MGP_CBAJ_G0003551.1 mouse_genomes_project 2 141974752 141976701 + Il1bos antisense antisense MGP_CBAJ_T0058691.1 MGP_CBAJ_G0026520.1 mouse_genomes_project 2 180168590 180185088 + MGP_CBAJ_P0058691 Ttpal protein_coding protein_coding MGP_CBAJ_T0058692.1 MGP_CBAJ_G0026520.1 mouse_genomes_project 2 180168598 180182576 + MGP_CBAJ_P0058692 Ttpal protein_coding protein_coding MGP_CBAJ_T0058693.1 MGP_CBAJ_G0026520.1 mouse_genomes_project 2 180168625 180178929 + Ttpal protein_coding retained_intron MGP_CBAJ_T0058694.1 MGP_CBAJ_G0026520.1 mouse_genomes_project 2 180168625 180173562 + MGP_CBAJ_P0058694 Ttpal protein_coding protein_coding MGP_CBAJ_T0058695.1 MGP_CBAJ_G0026520.1 mouse_genomes_project 2 180168627 180185089 + MGP_CBAJ_P0058695 Ttpal protein_coding nonsense_mediated_decay MGP_CBAJ_T0058696.1 MGP_CBAJ_G0026520.1 mouse_genomes_project 2 180168839 180177973 + MGP_CBAJ_P0058696 Ttpal protein_coding protein_coding MGP_CBAJ_T0058697.1 MGP_CBAJ_G0026520.1 mouse_genomes_project 2 180177595 180181502 + Ttpal protein_coding retained_intron MGP_CBAJ_T0013584.1 MGP_CBAJ_G0011696.1 mouse_genomes_project 2 144829721 144830595 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004050.1 MGP_CBAJ_G0003579.1 mouse_genomes_project 2 166808001 166809647 - Rspo4os antisense antisense MGP_CBAJ_T0010260.1 MGP_CBAJ_G0008398.1 mouse_genomes_project 2 26196074 26196147 + Mir126a miRNA miRNA MGP_CBAJ_T0058747.1 MGP_CBAJ_G0026542.1 mouse_genomes_project 2 181038482 181040920 - MGP_CBAJ_P0058747 Slpi protein_coding protein_coding MGP_CBAJ_T0058748.1 MGP_CBAJ_G0026542.1 mouse_genomes_project 2 181038574 181040480 - MGP_CBAJ_P0058748 Slpi protein_coding protein_coding MGP_CBAJ_T0058749.1 MGP_CBAJ_G0026542.1 mouse_genomes_project 2 181040007 181078758 - MGP_CBAJ_P0058749 Slpi protein_coding protein_coding MGP_CBAJ_T0099124.1 MGP_CBAJ_G0037379.1 mouse_genomes_project 2 132548139 132548245 - Gm23858 snRNA snRNA MGP_CBAJ_T0001026.1 MGP_CBAJ_G0000958.1 mouse_genomes_project 2 33097469 33101630 + TEC TEC MGP_CBAJ_T0099143.1 MGP_CBAJ_G0037398.1 mouse_genomes_project 2 181340648 181340755 + Gm25512 snRNA snRNA MGP_CBAJ_T0100364.1 MGP_CBAJ_G0038619.1 mouse_genomes_project 2 56717285 56717394 - Gm23315 snoRNA snoRNA MGP_CBAJ_T0013231.1 MGP_CBAJ_G0011343.1 mouse_genomes_project 2 1998852 1999329 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013307.1 MGP_CBAJ_G0011419.1 mouse_genomes_project 2 35283339 35283699 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013396.1 MGP_CBAJ_G0011508.1 mouse_genomes_project 2 69093174 69093753 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055647.1 MGP_CBAJ_G0025837.1 mouse_genomes_project 2 98833932 98844179 + MGP_CBAJ_P0055647 Rapsn protein_coding protein_coding MGP_CBAJ_T0055648.1 MGP_CBAJ_G0025837.1 mouse_genomes_project 2 98833939 98844176 + MGP_CBAJ_P0055648 Rapsn protein_coding protein_coding MGP_CBAJ_T0055649.1 MGP_CBAJ_G0025837.1 mouse_genomes_project 2 98833953 98844179 + MGP_CBAJ_P0055649 Rapsn protein_coding protein_coding MGP_CBAJ_T0055650.1 MGP_CBAJ_G0025837.1 mouse_genomes_project 2 98841237 98843930 + Rapsn protein_coding retained_intron MGP_CBAJ_T0003959.1 MGP_CBAJ_G0003518.1 mouse_genomes_project 2 98210907 98216756 + 4933423P22Rik antisense antisense MGP_CBAJ_T0003960.1 MGP_CBAJ_G0003518.1 mouse_genomes_project 2 98210921 98220091 + 4933423P22Rik antisense antisense MGP_CBAJ_T0003974.1 MGP_CBAJ_G0003525.1 mouse_genomes_project 2 115075970 115225616 - Pax6os1 antisense antisense MGP_CBAJ_T0003975.1 MGP_CBAJ_G0003525.1 mouse_genomes_project 2 115076772 115225566 - Pax6os1 antisense antisense MGP_CBAJ_T0101798.1 MGP_CBAJ_G0039829.1 mouse_genomes_project 2 92800651 92801608 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0058454.1 MGP_CBAJ_G0026469.1 mouse_genomes_project 2 172885826 172895359 + MGP_CBAJ_P0058454 Tldc2 protein_coding protein_coding MGP_CBAJ_T0058455.1 MGP_CBAJ_G0026469.1 mouse_genomes_project 2 172887279 172895377 + MGP_CBAJ_P0058455 Tldc2 protein_coding protein_coding MGP_CBAJ_T0055083.1 MGP_CBAJ_G0025580.1 mouse_genomes_project 2 82264056 82267006 + MGP_CBAJ_P0055083 Dfnb59 protein_coding protein_coding MGP_CBAJ_T0055084.1 MGP_CBAJ_G0025580.1 mouse_genomes_project 2 82264079 82271333 + MGP_CBAJ_P0055084 Dfnb59 protein_coding protein_coding MGP_CBAJ_T0055085.1 MGP_CBAJ_G0025580.1 mouse_genomes_project 2 82265853 82274072 + MGP_CBAJ_P0055085 Dfnb59 protein_coding protein_coding MGP_CBAJ_T0057662.1 MGP_CBAJ_G0026283.1 mouse_genomes_project 2 158487579 158491985 + Csrp2bp protein_coding processed_transcript MGP_CBAJ_T0057663.1 MGP_CBAJ_G0026283.1 mouse_genomes_project 2 158487584 158530019 + MGP_CBAJ_P0057663 Csrp2bp protein_coding protein_coding MGP_CBAJ_T0057665.1 MGP_CBAJ_G0026283.1 mouse_genomes_project 2 158492394 158515796 + MGP_CBAJ_P0057665 Csrp2bp protein_coding nonsense_mediated_decay MGP_CBAJ_T0057666.1 MGP_CBAJ_G0026283.1 mouse_genomes_project 2 158493978 158508994 + Csrp2bp protein_coding processed_transcript MGP_CBAJ_T0057667.1 MGP_CBAJ_G0026283.1 mouse_genomes_project 2 158494443 158523164 + Csrp2bp protein_coding processed_transcript MGP_CBAJ_T0057668.1 MGP_CBAJ_G0026283.1 mouse_genomes_project 2 158508711 158515861 + Csrp2bp protein_coding retained_intron MGP_CBAJ_T0057669.1 MGP_CBAJ_G0026283.1 mouse_genomes_project 2 158508725 158515842 + Csrp2bp protein_coding processed_transcript MGP_CBAJ_T0057670.1 MGP_CBAJ_G0026283.1 mouse_genomes_project 2 158524737 158530041 + Csrp2bp protein_coding retained_intron MGP_CBAJ_T0057671.1 MGP_CBAJ_G0026283.1 mouse_genomes_project 2 158524937 158526744 + MGP_CBAJ_P0057671 Csrp2bp protein_coding protein_coding MGP_CBAJ_T0057672.1 MGP_CBAJ_G0026283.1 mouse_genomes_project 2 158526468 158530042 + MGP_CBAJ_P0057672 Csrp2bp protein_coding protein_coding MGP_CBAJ_T0007305.1 MGP_CBAJ_G0005983.1 mouse_genomes_project 2 185633300 185638824 - Gm14235 lincRNA lincRNA MGP_CBAJ_T0001050.1 MGP_CBAJ_G0000982.1 mouse_genomes_project 2 73614729 73615595 + TEC TEC MGP_CBAJ_T0055504.1 MGP_CBAJ_G0025767.1 mouse_genomes_project 2 96159988 96160915 - MGP_CBAJ_P0055504 Olfr1198 protein_coding protein_coding MGP_CBAJ_T0056405.1 MGP_CBAJ_G0026008.1 mouse_genomes_project 2 129284257 129348927 - MGP_CBAJ_P0056405 Fsip1 protein_coding protein_coding MGP_CBAJ_T0056406.1 MGP_CBAJ_G0026008.1 mouse_genomes_project 2 129333609 129348917 - MGP_CBAJ_P0056406 Fsip1 protein_coding protein_coding MGP_CBAJ_T0007251.1 MGP_CBAJ_G0005939.1 mouse_genomes_project 2 163021819 163035349 + Gm14120 lincRNA lincRNA MGP_CBAJ_T0056699.1 MGP_CBAJ_G0026068.1 mouse_genomes_project 2 131997206 132056826 + MGP_CBAJ_P0056699 protein_coding protein_coding MGP_CBAJ_T0056700.1 MGP_CBAJ_G0026068.1 mouse_genomes_project 2 131997304 132092714 + MGP_CBAJ_P0056700 protein_coding protein_coding MGP_CBAJ_T0056701.1 MGP_CBAJ_G0026068.1 mouse_genomes_project 2 131997304 132091292 + MGP_CBAJ_P0056701 protein_coding unknown_likely_coding MGP_CBAJ_T0056702.1 MGP_CBAJ_G0026068.1 mouse_genomes_project 2 132059107 132092714 + MGP_CBAJ_P0056702 protein_coding protein_coding MGP_CBAJ_T0056703.1 MGP_CBAJ_G0026068.1 mouse_genomes_project 2 132075723 132092464 + MGP_CBAJ_P0056703 protein_coding protein_coding MGP_CBAJ_T0056704.1 MGP_CBAJ_G0026068.1 mouse_genomes_project 2 132078974 132110754 + MGP_CBAJ_P0056704 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056705.1 MGP_CBAJ_G0026068.1 mouse_genomes_project 2 132090345 132092512 + protein_coding retained_intron MGP_CBAJ_T0056706.1 MGP_CBAJ_G0026068.1 mouse_genomes_project 2 132091899 132108224 + protein_coding processed_transcript MGP_CBAJ_T0058799.1 MGP_CBAJ_G0026562.1 mouse_genomes_project 2 181473758 181477709 + MGP_CBAJ_P0058799 Spint4 protein_coding protein_coding MGP_CBAJ_T0013512.1 MGP_CBAJ_G0011624.1 mouse_genomes_project 2 111433410 111433704 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099128.1 MGP_CBAJ_G0037383.1 mouse_genomes_project 2 140540012 140540149 + Gm23101 snRNA snRNA MGP_CBAJ_T0055501.1 MGP_CBAJ_G0025764.1 mouse_genomes_project 2 96004025 96004712 + MGP_CBAJ_P0055501 protein_coding protein_coding MGP_CBAJ_T0010296.1 MGP_CBAJ_G0008434.1 mouse_genomes_project 2 80070469 80070606 - Gm44463 miRNA miRNA MGP_CBAJ_T0055430.1 MGP_CBAJ_G0025705.1 mouse_genomes_project 2 94074957 94075896 - MGP_CBAJ_P0055430 Olfr1110 protein_coding protein_coding MGP_CBAJ_T0099147.1 MGP_CBAJ_G0037402.1 mouse_genomes_project 2 200557759 200557922 + Gm25184 snRNA snRNA MGP_CBAJ_T0013567.1 MGP_CBAJ_G0011679.1 mouse_genomes_project 2 139988860 139998311 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0056697.1 MGP_CBAJ_G0026067.1 mouse_genomes_project 2 131967714 131980385 + MGP_CBAJ_P0056697 Haus2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056698.1 MGP_CBAJ_G0026067.1 mouse_genomes_project 2 131967784 131979697 + MGP_CBAJ_P0056698 Haus2 protein_coding protein_coding MGP_CBAJ_T0013386.1 MGP_CBAJ_G0011498.1 mouse_genomes_project 2 63799245 63800240 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013352.1 MGP_CBAJ_G0011464.1 mouse_genomes_project 2 53164099 53164963 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007274.1 MGP_CBAJ_G0005956.1 mouse_genomes_project 2 173472247 173474108 - Platr27 lincRNA lincRNA MGP_CBAJ_T0013234.1 MGP_CBAJ_G0011346.1 mouse_genomes_project 2 2390718 2391544 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0059413.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200067670 200130191 - MGP_CBAJ_P0059413 Kcnq2 protein_coding protein_coding MGP_CBAJ_T0059414.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200067670 200130277 - MGP_CBAJ_P0059414 Kcnq2 protein_coding protein_coding MGP_CBAJ_T0059415.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200067677 200130104 - MGP_CBAJ_P0059415 Kcnq2 protein_coding protein_coding MGP_CBAJ_T0059416.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200067679 200130154 - MGP_CBAJ_P0059416 Kcnq2 protein_coding protein_coding MGP_CBAJ_T0059417.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200067679 200130154 - MGP_CBAJ_P0059417 Kcnq2 protein_coding protein_coding MGP_CBAJ_T0059418.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200067679 200130154 - MGP_CBAJ_P0059418 Kcnq2 protein_coding protein_coding MGP_CBAJ_T0059419.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200067679 200130154 - MGP_CBAJ_P0059419 Kcnq2 protein_coding protein_coding MGP_CBAJ_T0059420.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200071668 200130238 - MGP_CBAJ_P0059420 Kcnq2 protein_coding protein_coding MGP_CBAJ_T0059421.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200072586 200106770 - MGP_CBAJ_P0059421 Kcnq2 protein_coding protein_coding MGP_CBAJ_T0059422.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200072590 200129899 - MGP_CBAJ_P0059422 Kcnq2 protein_coding protein_coding MGP_CBAJ_T0059423.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200072986 200130108 - MGP_CBAJ_P0059423 Kcnq2 protein_coding protein_coding MGP_CBAJ_T0059424.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200074490 200101843 - MGP_CBAJ_P0059424 Kcnq2 protein_coding protein_coding MGP_CBAJ_T0059425.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200074540 200087509 - Kcnq2 protein_coding processed_transcript MGP_CBAJ_T0059426.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200076669 200092886 - Kcnq2 protein_coding retained_intron MGP_CBAJ_T0059427.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200078065 200130154 - Kcnq2 protein_coding retained_intron MGP_CBAJ_T0059428.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200088328 200130154 - Kcnq2 protein_coding retained_intron MGP_CBAJ_T0059429.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200088553 200130154 - Kcnq2 protein_coding retained_intron MGP_CBAJ_T0059430.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200100530 200130154 - Kcnq2 protein_coding processed_transcript MGP_CBAJ_T0059431.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200100530 200130220 - Kcnq2 protein_coding retained_intron MGP_CBAJ_T0059432.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200100530 200130154 - Kcnq2 protein_coding retained_intron MGP_CBAJ_T0059433.1 MGP_CBAJ_G0026703.1 mouse_genomes_project 2 200100530 200130154 - Kcnq2 protein_coding retained_intron MGP_CBAJ_T0055507.1 MGP_CBAJ_G0025770.1 mouse_genomes_project 2 96246535 96248941 + MGP_CBAJ_P0055507 Olfr1205 protein_coding protein_coding MGP_CBAJ_T0017575.1 MGP_CBAJ_G0015196.1 mouse_genomes_project 2 119909205 119920123 - Platr8 processed_transcript processed_transcript MGP_CBAJ_T0053542.1 MGP_CBAJ_G0025289.1 mouse_genomes_project 2 31268509 31274566 + MGP_CBAJ_P0053542 Tor1b protein_coding protein_coding MGP_CBAJ_T0053543.1 MGP_CBAJ_G0025289.1 mouse_genomes_project 2 31268529 31274562 + Tor1b protein_coding retained_intron MGP_CBAJ_T0053544.1 MGP_CBAJ_G0025289.1 mouse_genomes_project 2 31268541 31272045 + MGP_CBAJ_P0053544 Tor1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0053545.1 MGP_CBAJ_G0025289.1 mouse_genomes_project 2 31268722 31272536 + Tor1b protein_coding retained_intron MGP_CBAJ_T0053546.1 MGP_CBAJ_G0025289.1 mouse_genomes_project 2 31268737 31274563 + MGP_CBAJ_P0053546 Tor1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0053547.1 MGP_CBAJ_G0025289.1 mouse_genomes_project 2 31269302 31272424 + MGP_CBAJ_P0053547 Tor1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0053548.1 MGP_CBAJ_G0025289.1 mouse_genomes_project 2 31270803 31272663 + Tor1b protein_coding processed_transcript MGP_CBAJ_T0017555.1 MGP_CBAJ_G0015187.1 mouse_genomes_project 2 100441016 100464423 + D930015M05Rik processed_transcript processed_transcript MGP_CBAJ_T0054228.1 MGP_CBAJ_G0025418.1 mouse_genomes_project 2 40215095 40250649 + MGP_CBAJ_P0054228 Olfml2a protein_coding protein_coding MGP_CBAJ_T0017557.1 MGP_CBAJ_G0015189.1 mouse_genomes_project 2 101124338 101129812 + 4631405J19Rik processed_transcript processed_transcript MGP_CBAJ_T0017558.1 MGP_CBAJ_G0015189.1 mouse_genomes_project 2 101124338 101129812 + 4631405J19Rik processed_transcript processed_transcript MGP_CBAJ_T0017559.1 MGP_CBAJ_G0015189.1 mouse_genomes_project 2 101125730 101129839 + 4631405J19Rik processed_transcript processed_transcript MGP_CBAJ_T0017560.1 MGP_CBAJ_G0015189.1 mouse_genomes_project 2 101125731 101128109 + 4631405J19Rik processed_transcript processed_transcript MGP_CBAJ_T0017561.1 MGP_CBAJ_G0015189.1 mouse_genomes_project 2 101126826 101145198 + 4631405J19Rik processed_transcript processed_transcript MGP_CBAJ_T0057099.1 MGP_CBAJ_G0026150.1 mouse_genomes_project 2 139541629 139568886 - MGP_CBAJ_P0057099 1810024B03Rik protein_coding protein_coding MGP_CBAJ_T0057100.1 MGP_CBAJ_G0026150.1 mouse_genomes_project 2 139557806 139568860 - 1810024B03Rik protein_coding processed_transcript MGP_CBAJ_T0054341.1 MGP_CBAJ_G0025433.1 mouse_genomes_project 2 51436832 51772616 + MGP_CBAJ_P0054341 Mbd5 protein_coding protein_coding MGP_CBAJ_T0054342.1 MGP_CBAJ_G0025433.1 mouse_genomes_project 2 51436842 51618566 + Mbd5 protein_coding processed_transcript MGP_CBAJ_T0054343.1 MGP_CBAJ_G0025433.1 mouse_genomes_project 2 51436847 51829895 + MGP_CBAJ_P0054343 Mbd5 protein_coding protein_coding MGP_CBAJ_T0054344.1 MGP_CBAJ_G0025433.1 mouse_genomes_project 2 51437286 51516074 + Mbd5 protein_coding processed_transcript MGP_CBAJ_T0054345.1 MGP_CBAJ_G0025433.1 mouse_genomes_project 2 51437287 51441349 + Mbd5 protein_coding processed_transcript MGP_CBAJ_T0054346.1 MGP_CBAJ_G0025433.1 mouse_genomes_project 2 51437389 51618430 + Mbd5 protein_coding processed_transcript MGP_CBAJ_T0054347.1 MGP_CBAJ_G0025433.1 mouse_genomes_project 2 51437467 51758275 + Mbd5 protein_coding processed_transcript MGP_CBAJ_T0054348.1 MGP_CBAJ_G0025433.1 mouse_genomes_project 2 51437473 51561570 + Mbd5 protein_coding processed_transcript MGP_CBAJ_T0054349.1 MGP_CBAJ_G0025433.1 mouse_genomes_project 2 51758686 51832607 + MGP_CBAJ_P0054349 Mbd5 protein_coding protein_coding MGP_CBAJ_T0054350.1 MGP_CBAJ_G0025433.1 mouse_genomes_project 2 51758887 51783556 + MGP_CBAJ_P0054350 Mbd5 protein_coding protein_coding MGP_CBAJ_T0054351.1 MGP_CBAJ_G0025433.1 mouse_genomes_project 2 51768618 51829921 + MGP_CBAJ_P0054351 Mbd5 protein_coding protein_coding MGP_CBAJ_T0054352.1 MGP_CBAJ_G0025433.1 mouse_genomes_project 2 51783660 51838322 + MGP_CBAJ_P0054352 Mbd5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054353.1 MGP_CBAJ_G0025433.1 mouse_genomes_project 2 51791530 51829575 + MGP_CBAJ_P0054353 Mbd5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054354.1 MGP_CBAJ_G0025433.1 mouse_genomes_project 2 51791531 51829586 + MGP_CBAJ_P0054354 Mbd5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054355.1 MGP_CBAJ_G0025433.1 mouse_genomes_project 2 51791679 51829809 + MGP_CBAJ_P0054355 Mbd5 protein_coding protein_coding MGP_CBAJ_T0007174.1 MGP_CBAJ_G0005878.1 mouse_genomes_project 2 110963772 110976568 + Gm13905 lincRNA lincRNA MGP_CBAJ_T0056341.1 MGP_CBAJ_G0025993.1 mouse_genomes_project 2 124262120 124279419 - MGP_CBAJ_P0056341 Grem1 protein_coding protein_coding MGP_CBAJ_T0003875.1 MGP_CBAJ_G0003458.1 mouse_genomes_project 2 32791933 32795534 - Gm13610 antisense antisense MGP_CBAJ_T0058686.1 MGP_CBAJ_G0026519.1 mouse_genomes_project 2 180078193 180118570 + MGP_CBAJ_P0058686 Hnf4a protein_coding protein_coding MGP_CBAJ_T0058687.1 MGP_CBAJ_G0026519.1 mouse_genomes_project 2 180112758 180125001 + Hnf4a protein_coding processed_transcript MGP_CBAJ_T0058688.1 MGP_CBAJ_G0026519.1 mouse_genomes_project 2 180113128 180137133 + MGP_CBAJ_P0058688 Hnf4a protein_coding protein_coding MGP_CBAJ_T0058689.1 MGP_CBAJ_G0026519.1 mouse_genomes_project 2 180113129 180137128 + MGP_CBAJ_P0058689 Hnf4a protein_coding protein_coding MGP_CBAJ_T0058690.1 MGP_CBAJ_G0026519.1 mouse_genomes_project 2 180116023 180125000 + MGP_CBAJ_P0058690 Hnf4a protein_coding protein_coding MGP_CBAJ_T0054694.1 MGP_CBAJ_G0025493.1 mouse_genomes_project 2 70123541 70341143 + MGP_CBAJ_P0054694 Csrnp3 protein_coding protein_coding MGP_CBAJ_T0054695.1 MGP_CBAJ_G0025493.1 mouse_genomes_project 2 70123616 70335203 + MGP_CBAJ_P0054695 Csrnp3 protein_coding protein_coding MGP_CBAJ_T0054696.1 MGP_CBAJ_G0025493.1 mouse_genomes_project 2 70123619 70157154 + Csrnp3 protein_coding retained_intron MGP_CBAJ_T0054697.1 MGP_CBAJ_G0025493.1 mouse_genomes_project 2 70123629 70332876 + MGP_CBAJ_P0054697 Csrnp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054698.1 MGP_CBAJ_G0025493.1 mouse_genomes_project 2 70138637 70246281 + Csrnp3 protein_coding retained_intron MGP_CBAJ_T0054699.1 MGP_CBAJ_G0025493.1 mouse_genomes_project 2 70223915 70333543 + MGP_CBAJ_P0054699 Csrnp3 protein_coding protein_coding MGP_CBAJ_T0054700.1 MGP_CBAJ_G0025493.1 mouse_genomes_project 2 70225792 70333081 + MGP_CBAJ_P0054700 Csrnp3 protein_coding protein_coding MGP_CBAJ_T0054701.1 MGP_CBAJ_G0025493.1 mouse_genomes_project 2 70245790 70332650 + MGP_CBAJ_P0054701 Csrnp3 protein_coding protein_coding MGP_CBAJ_T0059096.1 MGP_CBAJ_G0026622.1 mouse_genomes_project 2 186000547 186128785 - MGP_CBAJ_P0059096 Nfatc2 protein_coding protein_coding MGP_CBAJ_T0059097.1 MGP_CBAJ_G0026622.1 mouse_genomes_project 2 186000547 186128680 - MGP_CBAJ_P0059097 Nfatc2 protein_coding protein_coding MGP_CBAJ_T0059098.1 MGP_CBAJ_G0026622.1 mouse_genomes_project 2 186000550 186090641 - Nfatc2 protein_coding processed_transcript MGP_CBAJ_T0059099.1 MGP_CBAJ_G0026622.1 mouse_genomes_project 2 186010851 186051531 - MGP_CBAJ_P0059099 Nfatc2 protein_coding unknown_likely_coding MGP_CBAJ_T0059100.1 MGP_CBAJ_G0026622.1 mouse_genomes_project 2 186051095 186140003 - Nfatc2 protein_coding processed_transcript MGP_CBAJ_T0059101.1 MGP_CBAJ_G0026622.1 mouse_genomes_project 2 186051999 186140028 - MGP_CBAJ_P0059101 Nfatc2 protein_coding protein_coding MGP_CBAJ_T0059102.1 MGP_CBAJ_G0026622.1 mouse_genomes_project 2 186052285 186128611 - MGP_CBAJ_P0059102 Nfatc2 protein_coding protein_coding MGP_CBAJ_T0059103.1 MGP_CBAJ_G0026622.1 mouse_genomes_project 2 186066360 186128751 - Nfatc2 protein_coding retained_intron MGP_CBAJ_T0059104.1 MGP_CBAJ_G0026622.1 mouse_genomes_project 2 186104827 186128785 - Nfatc2 protein_coding retained_intron MGP_CBAJ_T0054368.1 MGP_CBAJ_G0025437.1 mouse_genomes_project 2 52643632 52786553 + MGP_CBAJ_P0054368 Lypd6 protein_coding protein_coding MGP_CBAJ_T0054369.1 MGP_CBAJ_G0025437.1 mouse_genomes_project 2 52643665 52783654 + MGP_CBAJ_P0054369 Lypd6 protein_coding protein_coding MGP_CBAJ_T0054370.1 MGP_CBAJ_G0025437.1 mouse_genomes_project 2 52643667 52786548 + MGP_CBAJ_P0054370 Lypd6 protein_coding protein_coding MGP_CBAJ_T0054371.1 MGP_CBAJ_G0025437.1 mouse_genomes_project 2 52709158 52786547 + MGP_CBAJ_P0054371 Lypd6 protein_coding protein_coding MGP_CBAJ_T0054372.1 MGP_CBAJ_G0025437.1 mouse_genomes_project 2 52757371 52765258 + MGP_CBAJ_P0054372 Lypd6 protein_coding protein_coding MGP_CBAJ_T0053246.1 MGP_CBAJ_G0025248.1 mouse_genomes_project 2 29007559 29039345 + MGP_CBAJ_P0053246 Ttf1 protein_coding protein_coding MGP_CBAJ_T0053247.1 MGP_CBAJ_G0025248.1 mouse_genomes_project 2 29007563 29039305 + Ttf1 protein_coding retained_intron MGP_CBAJ_T0053248.1 MGP_CBAJ_G0025248.1 mouse_genomes_project 2 29025000 29033258 + Ttf1 protein_coding retained_intron MGP_CBAJ_T0053249.1 MGP_CBAJ_G0025248.1 mouse_genomes_project 2 29035070 29036354 + Ttf1 protein_coding retained_intron MGP_CBAJ_T0011385.1 MGP_CBAJ_G0009523.1 mouse_genomes_project 2 139859651 139859943 - Gm22613 misc_RNA misc_RNA MGP_CBAJ_T0057694.1 MGP_CBAJ_G0026289.1 mouse_genomes_project 2 158741045 158742358 + MGP_CBAJ_P0057694 Gm561 protein_coding protein_coding MGP_CBAJ_T0001029.1 MGP_CBAJ_G0000961.1 mouse_genomes_project 2 36233095 36234716 + TEC TEC MGP_CBAJ_T0057318.1 MGP_CBAJ_G0026208.1 mouse_genomes_project 2 143295936 143297871 - MGP_CBAJ_P0057318 Avp protein_coding protein_coding MGP_CBAJ_T0056892.1 MGP_CBAJ_G0026098.1 mouse_genomes_project 2 133514586 133517185 - MGP_CBAJ_P0056892 protein_coding protein_coding MGP_CBAJ_T0007289.1 MGP_CBAJ_G0005971.1 mouse_genomes_project 2 183022466 183039989 - Gm11464 lincRNA lincRNA MGP_CBAJ_T0055034.1 MGP_CBAJ_G0025561.1 mouse_genomes_project 2 80061401 80064571 + MGP_CBAJ_P0055034 Hoxd10 protein_coding protein_coding MGP_CBAJ_T0055846.1 MGP_CBAJ_G0025863.1 mouse_genomes_project 2 100396974 100402915 - MGP_CBAJ_P0055846 Gyltl1b protein_coding protein_coding MGP_CBAJ_T0055847.1 MGP_CBAJ_G0025863.1 mouse_genomes_project 2 100396974 100402986 - MGP_CBAJ_P0055847 Gyltl1b protein_coding protein_coding MGP_CBAJ_T0055848.1 MGP_CBAJ_G0025863.1 mouse_genomes_project 2 100396975 100402965 - Gyltl1b protein_coding retained_intron MGP_CBAJ_T0055849.1 MGP_CBAJ_G0025863.1 mouse_genomes_project 2 100396979 100402947 - MGP_CBAJ_P0055849 Gyltl1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0055850.1 MGP_CBAJ_G0025863.1 mouse_genomes_project 2 100396980 100402940 - MGP_CBAJ_P0055850 Gyltl1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0055851.1 MGP_CBAJ_G0025863.1 mouse_genomes_project 2 100396988 100402957 - MGP_CBAJ_P0055851 Gyltl1b protein_coding protein_coding MGP_CBAJ_T0055852.1 MGP_CBAJ_G0025863.1 mouse_genomes_project 2 100396988 100403896 - MGP_CBAJ_P0055852 Gyltl1b protein_coding protein_coding MGP_CBAJ_T0055853.1 MGP_CBAJ_G0025863.1 mouse_genomes_project 2 100396999 100402962 - MGP_CBAJ_P0055853 Gyltl1b protein_coding protein_coding MGP_CBAJ_T0055854.1 MGP_CBAJ_G0025863.1 mouse_genomes_project 2 100397720 100398450 - Gyltl1b protein_coding retained_intron MGP_CBAJ_T0055855.1 MGP_CBAJ_G0025863.1 mouse_genomes_project 2 100397903 100398705 - Gyltl1b protein_coding retained_intron MGP_CBAJ_T0055856.1 MGP_CBAJ_G0025863.1 mouse_genomes_project 2 100398946 100401403 - Gyltl1b protein_coding retained_intron MGP_CBAJ_T0055857.1 MGP_CBAJ_G0025863.1 mouse_genomes_project 2 100399242 100401590 - Gyltl1b protein_coding processed_transcript MGP_CBAJ_T0055858.1 MGP_CBAJ_G0025863.1 mouse_genomes_project 2 100399315 100402002 - Gyltl1b protein_coding retained_intron MGP_CBAJ_T0055859.1 MGP_CBAJ_G0025863.1 mouse_genomes_project 2 100399997 100402962 - Gyltl1b protein_coding retained_intron MGP_CBAJ_T0055860.1 MGP_CBAJ_G0025863.1 mouse_genomes_project 2 100401634 100402947 - Gyltl1b protein_coding retained_intron MGP_CBAJ_T0055861.1 MGP_CBAJ_G0025863.1 mouse_genomes_project 2 100401863 100406798 - MGP_CBAJ_P0055861 Gyltl1b protein_coding protein_coding MGP_CBAJ_T0055862.1 MGP_CBAJ_G0025863.1 mouse_genomes_project 2 100401913 100403874 - Gyltl1b protein_coding retained_intron MGP_CBAJ_T0058521.1 MGP_CBAJ_G0026482.1 mouse_genomes_project 2 173956738 174007603 + MGP_CBAJ_P0058521 Rprd1b protein_coding protein_coding MGP_CBAJ_T0058522.1 MGP_CBAJ_G0026482.1 mouse_genomes_project 2 173956749 173976974 + Rprd1b protein_coding retained_intron MGP_CBAJ_T0058523.1 MGP_CBAJ_G0026482.1 mouse_genomes_project 2 173956933 174007603 + Rprd1b protein_coding processed_transcript MGP_CBAJ_T0058524.1 MGP_CBAJ_G0026482.1 mouse_genomes_project 2 173956942 174007603 + MGP_CBAJ_P0058524 Rprd1b protein_coding protein_coding MGP_CBAJ_T0058525.1 MGP_CBAJ_G0026482.1 mouse_genomes_project 2 173956962 174007603 + MGP_CBAJ_P0058525 Rprd1b protein_coding protein_coding MGP_CBAJ_T0058526.1 MGP_CBAJ_G0026482.1 mouse_genomes_project 2 173957040 174079323 + MGP_CBAJ_P0058526 Rprd1b protein_coding protein_coding MGP_CBAJ_T0058527.1 MGP_CBAJ_G0026482.1 mouse_genomes_project 2 173971686 174004469 + MGP_CBAJ_P0058527 Rprd1b protein_coding protein_coding MGP_CBAJ_T0058528.1 MGP_CBAJ_G0026482.1 mouse_genomes_project 2 173976222 173999911 + MGP_CBAJ_P0058528 Rprd1b protein_coding protein_coding MGP_CBAJ_T0100422.1 MGP_CBAJ_G0038677.1 mouse_genomes_project 2 184303737 184303830 + Gm25878 snoRNA snoRNA MGP_CBAJ_T0052374.1 MGP_CBAJ_G0025086.1 mouse_genomes_project 2 17012862 17038052 - MGP_CBAJ_P0052374 Dnajc1 protein_coding protein_coding MGP_CBAJ_T0052375.1 MGP_CBAJ_G0025086.1 mouse_genomes_project 2 17023865 17234596 - MGP_CBAJ_P0052375 Dnajc1 protein_coding protein_coding MGP_CBAJ_T0052376.1 MGP_CBAJ_G0025086.1 mouse_genomes_project 2 17026749 17035397 - Dnajc1 protein_coding processed_transcript MGP_CBAJ_T0052377.1 MGP_CBAJ_G0025086.1 mouse_genomes_project 2 17032243 17234615 - MGP_CBAJ_P0052377 Dnajc1 protein_coding protein_coding MGP_CBAJ_T0052378.1 MGP_CBAJ_G0025086.1 mouse_genomes_project 2 17035629 17234427 - MGP_CBAJ_P0052378 Dnajc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052379.1 MGP_CBAJ_G0025086.1 mouse_genomes_project 2 17035629 17234205 - MGP_CBAJ_P0052379 Dnajc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052380.1 MGP_CBAJ_G0025086.1 mouse_genomes_project 2 17035649 17234206 - MGP_CBAJ_P0052380 Dnajc1 protein_coding protein_coding MGP_CBAJ_T0052381.1 MGP_CBAJ_G0025086.1 mouse_genomes_project 2 17038025 17142841 - MGP_CBAJ_P0052381 Dnajc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052382.1 MGP_CBAJ_G0025086.1 mouse_genomes_project 2 17142462 17146083 - Dnajc1 protein_coding retained_intron MGP_CBAJ_T0052383.1 MGP_CBAJ_G0025086.1 mouse_genomes_project 2 17144409 17234609 - Dnajc1 protein_coding processed_transcript MGP_CBAJ_T0013598.1 MGP_CBAJ_G0011710.1 mouse_genomes_project 2 153511516 153511944 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0058244.1 MGP_CBAJ_G0026441.1 mouse_genomes_project 2 171385379 171392679 - MGP_CBAJ_P0058244 Fam83c protein_coding protein_coding MGP_CBAJ_T0058986.1 MGP_CBAJ_G0026599.1 mouse_genomes_project 2 184121001 184166216 + Cse1l protein_coding processed_transcript MGP_CBAJ_T0058987.1 MGP_CBAJ_G0026599.1 mouse_genomes_project 2 184121020 184168055 + MGP_CBAJ_P0058987 Cse1l protein_coding protein_coding MGP_CBAJ_T0058988.1 MGP_CBAJ_G0026599.1 mouse_genomes_project 2 184121072 184167767 + MGP_CBAJ_P0058988 Cse1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0058989.1 MGP_CBAJ_G0026599.1 mouse_genomes_project 2 184132360 184167459 + MGP_CBAJ_P0058989 Cse1l protein_coding protein_coding MGP_CBAJ_T0058990.1 MGP_CBAJ_G0026599.1 mouse_genomes_project 2 184147631 184167474 + MGP_CBAJ_P0058990 Cse1l protein_coding protein_coding MGP_CBAJ_T0058991.1 MGP_CBAJ_G0026599.1 mouse_genomes_project 2 184147666 184154077 + Cse1l protein_coding retained_intron MGP_CBAJ_T0058992.1 MGP_CBAJ_G0026599.1 mouse_genomes_project 2 184147825 184156761 + Cse1l protein_coding retained_intron MGP_CBAJ_T0058993.1 MGP_CBAJ_G0026599.1 mouse_genomes_project 2 184147869 184159095 + Cse1l protein_coding processed_transcript MGP_CBAJ_T0058994.1 MGP_CBAJ_G0026599.1 mouse_genomes_project 2 184156428 184166519 + Cse1l protein_coding retained_intron MGP_CBAJ_T0058995.1 MGP_CBAJ_G0026599.1 mouse_genomes_project 2 184156455 184163120 + MGP_CBAJ_P0058995 Cse1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0058996.1 MGP_CBAJ_G0026599.1 mouse_genomes_project 2 184158766 184162916 + Cse1l protein_coding retained_intron MGP_CBAJ_T0058997.1 MGP_CBAJ_G0026599.1 mouse_genomes_project 2 184162498 184163485 + Cse1l protein_coding retained_intron MGP_CBAJ_T0057989.1 MGP_CBAJ_G0026380.1 mouse_genomes_project 2 168154857 168161398 - MGP_CBAJ_P0057989 Pdrg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057990.1 MGP_CBAJ_G0026380.1 mouse_genomes_project 2 168154857 168161398 - MGP_CBAJ_P0057990 Pdrg1 protein_coding protein_coding MGP_CBAJ_T0057991.1 MGP_CBAJ_G0026380.1 mouse_genomes_project 2 168155438 168158461 - Pdrg1 protein_coding retained_intron MGP_CBAJ_T0057992.1 MGP_CBAJ_G0026380.1 mouse_genomes_project 2 168156263 168161337 - MGP_CBAJ_P0057992 Pdrg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057993.1 MGP_CBAJ_G0026380.1 mouse_genomes_project 2 168158183 168161317 - Pdrg1 protein_coding retained_intron MGP_CBAJ_T0057994.1 MGP_CBAJ_G0026380.1 mouse_genomes_project 2 168158353 168161333 - MGP_CBAJ_P0057994 Pdrg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057995.1 MGP_CBAJ_G0026380.1 mouse_genomes_project 2 168159321 168161348 - Pdrg1 protein_coding retained_intron MGP_CBAJ_T0057996.1 MGP_CBAJ_G0026380.1 mouse_genomes_project 2 168159985 168161313 - Pdrg1 protein_coding processed_transcript MGP_CBAJ_T0099084.1 MGP_CBAJ_G0037339.1 mouse_genomes_project 2 271671 271812 - Gm22005 snRNA snRNA MGP_CBAJ_T0054909.1 MGP_CBAJ_G0025537.1 mouse_genomes_project 2 76526106 76531974 + MGP_CBAJ_P0054909 Dlx1 protein_coding protein_coding MGP_CBAJ_T0054910.1 MGP_CBAJ_G0025537.1 mouse_genomes_project 2 76526676 76528059 + MGP_CBAJ_P0054910 Dlx1 protein_coding protein_coding MGP_CBAJ_T0054911.1 MGP_CBAJ_G0025537.1 mouse_genomes_project 2 76527094 76528225 + MGP_CBAJ_P0054911 Dlx1 protein_coding protein_coding MGP_CBAJ_T0054912.1 MGP_CBAJ_G0025537.1 mouse_genomes_project 2 76527846 76530513 + MGP_CBAJ_P0054912 Dlx1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054913.1 MGP_CBAJ_G0025537.1 mouse_genomes_project 2 76527940 76531975 + Dlx1 protein_coding retained_intron MGP_CBAJ_T0054914.1 MGP_CBAJ_G0025537.1 mouse_genomes_project 2 76528773 76530683 + Dlx1 protein_coding retained_intron MGP_CBAJ_T0058529.1 MGP_CBAJ_G0026483.1 mouse_genomes_project 2 174063193 174093518 - MGP_CBAJ_P0058529 Tgm2 protein_coding protein_coding MGP_CBAJ_T0058530.1 MGP_CBAJ_G0026483.1 mouse_genomes_project 2 174074369 174093475 - MGP_CBAJ_P0058530 Tgm2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058531.1 MGP_CBAJ_G0026483.1 mouse_genomes_project 2 174077405 174093448 - Tgm2 protein_coding retained_intron MGP_CBAJ_T0058532.1 MGP_CBAJ_G0026483.1 mouse_genomes_project 2 174081347 174086826 - Tgm2 protein_coding processed_transcript MGP_CBAJ_T0013652.1 MGP_CBAJ_G0011764.1 mouse_genomes_project 2 171073997 171074459 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0052868.1 MGP_CBAJ_G0025174.1 mouse_genomes_project 2 25147820 25150918 + MGP_CBAJ_P0052868 Lcn8 protein_coding protein_coding MGP_CBAJ_T0099133.1 MGP_CBAJ_G0037388.1 mouse_genomes_project 2 146678998 146679105 - Gm25258 snRNA snRNA MGP_CBAJ_T0057256.1 MGP_CBAJ_G0026192.1 mouse_genomes_project 2 142676633 142717316 + MGP_CBAJ_P0057256 Tgm3 protein_coding protein_coding MGP_CBAJ_T0056109.1 MGP_CBAJ_G0025911.1 mouse_genomes_project 2 113397095 113397381 - MGP_CBAJ_P0056109 protein_coding protein_coding MGP_CBAJ_T0053806.1 MGP_CBAJ_G0025327.1 mouse_genomes_project 2 33259779 33273071 + MGP_CBAJ_P0053806 Ak1 protein_coding protein_coding MGP_CBAJ_T0053807.1 MGP_CBAJ_G0025327.1 mouse_genomes_project 2 33263458 33273067 + MGP_CBAJ_P0053807 Ak1 protein_coding protein_coding MGP_CBAJ_T0053808.1 MGP_CBAJ_G0025327.1 mouse_genomes_project 2 33263459 33269187 + MGP_CBAJ_P0053808 Ak1 protein_coding protein_coding MGP_CBAJ_T0053809.1 MGP_CBAJ_G0025327.1 mouse_genomes_project 2 33266411 33269150 + MGP_CBAJ_P0053809 Ak1 protein_coding protein_coding MGP_CBAJ_T0053810.1 MGP_CBAJ_G0025327.1 mouse_genomes_project 2 33267525 33273065 + MGP_CBAJ_P0053810 Ak1 protein_coding protein_coding MGP_CBAJ_T0053811.1 MGP_CBAJ_G0025327.1 mouse_genomes_project 2 33267542 33271413 + Ak1 protein_coding retained_intron MGP_CBAJ_T0013485.1 MGP_CBAJ_G0011597.1 mouse_genomes_project 2 99630045 99631306 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0056273.1 MGP_CBAJ_G0025955.1 mouse_genomes_project 2 121449474 121450748 + MGP_CBAJ_P0056273 protein_coding protein_coding MGP_CBAJ_T0013527.1 MGP_CBAJ_G0011639.1 mouse_genomes_project 2 115896059 115896329 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013423.1 MGP_CBAJ_G0011535.1 mouse_genomes_project 2 78396553 78396898 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010368.1 MGP_CBAJ_G0008506.1 mouse_genomes_project 2 199310128 199310232 + Mir133a-2 miRNA miRNA MGP_CBAJ_T0055225.1 MGP_CBAJ_G0025604.1 mouse_genomes_project 2 90028418 90042191 + Zc3h15 protein_coding processed_transcript MGP_CBAJ_T0055226.1 MGP_CBAJ_G0025604.1 mouse_genomes_project 2 90028474 90037493 + Zc3h15 protein_coding processed_transcript MGP_CBAJ_T0055227.1 MGP_CBAJ_G0025604.1 mouse_genomes_project 2 90028560 90044059 + Zc3h15 protein_coding processed_transcript MGP_CBAJ_T0055228.1 MGP_CBAJ_G0025604.1 mouse_genomes_project 2 90028590 90048919 + MGP_CBAJ_P0055228 Zc3h15 protein_coding protein_coding MGP_CBAJ_T0055229.1 MGP_CBAJ_G0025604.1 mouse_genomes_project 2 90040506 90041954 + Zc3h15 protein_coding processed_transcript MGP_CBAJ_T0055230.1 MGP_CBAJ_G0025604.1 mouse_genomes_project 2 90040999 90045410 + Zc3h15 protein_coding processed_transcript MGP_CBAJ_T0054784.1 MGP_CBAJ_G0025513.1 mouse_genomes_project 2 74394845 74414148 + MGP_CBAJ_P0054784 Klhl41 protein_coding protein_coding MGP_CBAJ_T0003809.1 MGP_CBAJ_G0003408.1 mouse_genomes_project 2 1212477 1222215 - 1700080N15Rik antisense antisense MGP_CBAJ_T0003810.1 MGP_CBAJ_G0003408.1 mouse_genomes_project 2 1212479 1222215 - 1700080N15Rik antisense antisense MGP_CBAJ_T0003811.1 MGP_CBAJ_G0003408.1 mouse_genomes_project 2 1215891 1222213 - 1700080N15Rik antisense antisense MGP_CBAJ_T0057129.1 MGP_CBAJ_G0026158.1 mouse_genomes_project 2 139803405 139814301 + MGP_CBAJ_P0057129 Gpat2 protein_coding protein_coding MGP_CBAJ_T0013270.1 MGP_CBAJ_G0011382.1 mouse_genomes_project 2 18026400 18027798 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0056905.1 MGP_CBAJ_G0026102.1 mouse_genomes_project 2 133644750 133718730 - MGP_CBAJ_P0056905 Spg11 protein_coding protein_coding MGP_CBAJ_T0056906.1 MGP_CBAJ_G0026102.1 mouse_genomes_project 2 133647215 133718658 - MGP_CBAJ_P0056906 Spg11 protein_coding unknown_likely_coding MGP_CBAJ_T0056907.1 MGP_CBAJ_G0026102.1 mouse_genomes_project 2 133692550 133718640 - Spg11 protein_coding processed_transcript MGP_CBAJ_T0056908.1 MGP_CBAJ_G0026102.1 mouse_genomes_project 2 133706948 133718719 - Spg11 protein_coding processed_transcript MGP_CBAJ_T0055425.1 MGP_CBAJ_G0025700.1 mouse_genomes_project 2 93950879 93951818 - MGP_CBAJ_P0055425 Olfr1105 protein_coding protein_coding MGP_CBAJ_T0056093.1 MGP_CBAJ_G0025908.1 mouse_genomes_project 2 113235576 113300801 - 4931422A03Rik protein_coding processed_transcript MGP_CBAJ_T0056100.1 MGP_CBAJ_G0025908.1 mouse_genomes_project 2 113263767 113301310 - MGP_CBAJ_P0056100 4931422A03Rik protein_coding protein_coding MGP_CBAJ_T0056101.1 MGP_CBAJ_G0025908.1 mouse_genomes_project 2 113298901 113301363 - 4931422A03Rik protein_coding retained_intron MGP_CBAJ_T0007038.1 MGP_CBAJ_G0005769.1 mouse_genomes_project 2 9303439 9307938 - Gm38171 lincRNA lincRNA MGP_CBAJ_T0003837.1 MGP_CBAJ_G0003430.1 mouse_genomes_project 2 19802726 19806584 - Gm13362 antisense antisense MGP_CBAJ_T0057957.1 MGP_CBAJ_G0026372.1 mouse_genomes_project 2 167837043 167838202 + MGP_CBAJ_P0057957 Id1 protein_coding protein_coding MGP_CBAJ_T0057958.1 MGP_CBAJ_G0026372.1 mouse_genomes_project 2 167837043 167838202 + MGP_CBAJ_P0057958 Id1 protein_coding protein_coding MGP_CBAJ_T0013463.1 MGP_CBAJ_G0011575.1 mouse_genomes_project 2 93025266 93028195 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0054975.1 MGP_CBAJ_G0025550.1 mouse_genomes_project 2 78572716 78617417 - MGP_CBAJ_P0054975 Gpr155 protein_coding protein_coding MGP_CBAJ_T0054976.1 MGP_CBAJ_G0025550.1 mouse_genomes_project 2 78573168 78617257 - MGP_CBAJ_P0054976 Gpr155 protein_coding protein_coding MGP_CBAJ_T0054977.1 MGP_CBAJ_G0025550.1 mouse_genomes_project 2 78574200 78617288 - MGP_CBAJ_P0054977 Gpr155 protein_coding protein_coding MGP_CBAJ_T0054978.1 MGP_CBAJ_G0025550.1 mouse_genomes_project 2 78578857 78593530 - MGP_CBAJ_P0054978 Gpr155 protein_coding protein_coding MGP_CBAJ_T0054979.1 MGP_CBAJ_G0025550.1 mouse_genomes_project 2 78582102 78617243 - Gpr155 protein_coding processed_transcript MGP_CBAJ_T0054980.1 MGP_CBAJ_G0025550.1 mouse_genomes_project 2 78582102 78617243 - Gpr155 protein_coding retained_intron MGP_CBAJ_T0054981.1 MGP_CBAJ_G0025550.1 mouse_genomes_project 2 78593438 78601148 - Gpr155 protein_coding processed_transcript MGP_CBAJ_T0054982.1 MGP_CBAJ_G0025550.1 mouse_genomes_project 2 78612250 78617256 - Gpr155 protein_coding retained_intron MGP_CBAJ_T0098027.1 MGP_CBAJ_G0036300.1 mouse_genomes_project 2 183281865 183281970 + Gm22687 rRNA rRNA MGP_CBAJ_T0057822.1 MGP_CBAJ_G0026329.1 mouse_genomes_project 2 165583559 165606687 + MGP_CBAJ_P0057822 Entpd6 protein_coding protein_coding MGP_CBAJ_T0057823.1 MGP_CBAJ_G0026329.1 mouse_genomes_project 2 165583598 165598353 + Entpd6 protein_coding retained_intron MGP_CBAJ_T0057824.1 MGP_CBAJ_G0026329.1 mouse_genomes_project 2 165583609 165598824 + Entpd6 protein_coding processed_transcript MGP_CBAJ_T0057825.1 MGP_CBAJ_G0026329.1 mouse_genomes_project 2 165583688 165587741 + Entpd6 protein_coding processed_transcript MGP_CBAJ_T0054466.1 MGP_CBAJ_G0025457.1 mouse_genomes_project 2 61477380 61524750 + MGP_CBAJ_P0054466 Galnt5 protein_coding protein_coding MGP_CBAJ_T0054467.1 MGP_CBAJ_G0025457.1 mouse_genomes_project 2 61477380 61518772 + MGP_CBAJ_P0054467 Galnt5 protein_coding protein_coding MGP_CBAJ_T0017533.1 MGP_CBAJ_G0015171.1 mouse_genomes_project 2 80052931 80063660 + Gm28309 processed_transcript processed_transcript MGP_CBAJ_T0013436.1 MGP_CBAJ_G0011548.1 mouse_genomes_project 2 84255334 84255973 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013250.1 MGP_CBAJ_G0011362.1 mouse_genomes_project 2 13128782 13129117 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011386.1 MGP_CBAJ_G0009524.1 mouse_genomes_project 2 143454494 143454866 - Gm24893 misc_RNA misc_RNA MGP_CBAJ_T0053478.1 MGP_CBAJ_G0025280.1 mouse_genomes_project 2 30570290 30586959 - MGP_CBAJ_P0053478 Crat protein_coding protein_coding MGP_CBAJ_T0053479.1 MGP_CBAJ_G0025280.1 mouse_genomes_project 2 30570295 30576504 - Crat protein_coding processed_transcript MGP_CBAJ_T0053480.1 MGP_CBAJ_G0025280.1 mouse_genomes_project 2 30570920 30587001 - MGP_CBAJ_P0053480 Crat protein_coding protein_coding MGP_CBAJ_T0053481.1 MGP_CBAJ_G0025280.1 mouse_genomes_project 2 30572317 30575112 - MGP_CBAJ_P0053481 Crat protein_coding protein_coding MGP_CBAJ_T0053482.1 MGP_CBAJ_G0025280.1 mouse_genomes_project 2 30572397 30586712 - MGP_CBAJ_P0053482 Crat protein_coding protein_coding MGP_CBAJ_T0053483.1 MGP_CBAJ_G0025280.1 mouse_genomes_project 2 30572456 30574785 - MGP_CBAJ_P0053483 Crat protein_coding protein_coding MGP_CBAJ_T0053484.1 MGP_CBAJ_G0025280.1 mouse_genomes_project 2 30579265 30586496 - MGP_CBAJ_P0053484 Crat protein_coding protein_coding MGP_CBAJ_T0053485.1 MGP_CBAJ_G0025280.1 mouse_genomes_project 2 30579310 30586736 - MGP_CBAJ_P0053485 Crat protein_coding nonsense_mediated_decay MGP_CBAJ_T0053486.1 MGP_CBAJ_G0025280.1 mouse_genomes_project 2 30584230 30585527 - Crat protein_coding processed_transcript MGP_CBAJ_T0053487.1 MGP_CBAJ_G0025280.1 mouse_genomes_project 2 30584326 30586706 - MGP_CBAJ_P0053487 Crat protein_coding protein_coding MGP_CBAJ_T0053488.1 MGP_CBAJ_G0025280.1 mouse_genomes_project 2 30584347 30586521 - MGP_CBAJ_P0053488 Crat protein_coding protein_coding MGP_CBAJ_T0053489.1 MGP_CBAJ_G0025280.1 mouse_genomes_project 2 30585247 30586788 - Crat protein_coding processed_transcript MGP_CBAJ_T0053490.1 MGP_CBAJ_G0025280.1 mouse_genomes_project 2 30585782 30586595 - MGP_CBAJ_P0053490 Crat protein_coding protein_coding MGP_CBAJ_T0058129.1 MGP_CBAJ_G0026419.1 mouse_genomes_project 2 170186801 170187577 - Gm14214 protein_coding translated_processed_pseudogene MGP_CBAJ_T0058130.1 MGP_CBAJ_G0026419.1 mouse_genomes_project 2 170186801 170187479 - MGP_CBAJ_P0058130 Gm14214 protein_coding protein_coding MGP_CBAJ_T0010226.1 MGP_CBAJ_G0008364.1 mouse_genomes_project 2 8384844 8384971 + Gm22091 miRNA miRNA MGP_CBAJ_T0007323.1 MGP_CBAJ_G0005999.1 mouse_genomes_project 2 189242472 189244920 + Gm14640 lincRNA lincRNA MGP_CBAJ_T0101834.1 MGP_CBAJ_G0039865.1 mouse_genomes_project 2 169382945 169387295 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010215.1 MGP_CBAJ_G0008353.1 mouse_genomes_project 2 8370861 8370980 + Mir669e miRNA miRNA MGP_CBAJ_T0010304.1 MGP_CBAJ_G0008442.1 mouse_genomes_project 2 99282897 99282980 - Gm22071 miRNA miRNA MGP_CBAJ_T0010281.1 MGP_CBAJ_G0008419.1 mouse_genomes_project 2 34076669 34076722 - Gm25998 miRNA miRNA MGP_CBAJ_T0057231.1 MGP_CBAJ_G0026185.1 mouse_genomes_project 2 141859015 141895331 - MGP_CBAJ_P0057231 Ckap2l protein_coding protein_coding MGP_CBAJ_T0052902.1 MGP_CBAJ_G0025187.1 mouse_genomes_project 2 25453874 25504204 - MGP_CBAJ_P0052902 Camsap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052903.1 MGP_CBAJ_G0025187.1 mouse_genomes_project 2 25455936 25523461 - MGP_CBAJ_P0052903 Camsap1 protein_coding protein_coding MGP_CBAJ_T0052904.1 MGP_CBAJ_G0025187.1 mouse_genomes_project 2 25456234 25461864 - Camsap1 protein_coding processed_transcript MGP_CBAJ_T0052905.1 MGP_CBAJ_G0025187.1 mouse_genomes_project 2 25456245 25460917 - Camsap1 protein_coding processed_transcript MGP_CBAJ_T0052906.1 MGP_CBAJ_G0025187.1 mouse_genomes_project 2 25468519 25523240 - MGP_CBAJ_P0052906 Camsap1 protein_coding protein_coding MGP_CBAJ_T0052907.1 MGP_CBAJ_G0025187.1 mouse_genomes_project 2 25472747 25523117 - MGP_CBAJ_P0052907 Camsap1 protein_coding unknown_likely_coding MGP_CBAJ_T0052908.1 MGP_CBAJ_G0025187.1 mouse_genomes_project 2 25478955 25504333 - MGP_CBAJ_P0052908 Camsap1 protein_coding protein_coding MGP_CBAJ_T0052909.1 MGP_CBAJ_G0025187.1 mouse_genomes_project 2 25478974 25502769 - MGP_CBAJ_P0052909 Camsap1 protein_coding protein_coding MGP_CBAJ_T0052910.1 MGP_CBAJ_G0025187.1 mouse_genomes_project 2 25479148 25504241 - MGP_CBAJ_P0052910 Camsap1 protein_coding protein_coding MGP_CBAJ_T0052911.1 MGP_CBAJ_G0025187.1 mouse_genomes_project 2 25492768 25523387 - MGP_CBAJ_P0052911 Camsap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052912.1 MGP_CBAJ_G0025187.1 mouse_genomes_project 2 25502762 25523235 - MGP_CBAJ_P0052912 Camsap1 protein_coding protein_coding MGP_CBAJ_T0052714.1 MGP_CBAJ_G0025150.1 mouse_genomes_project 2 24730793 24758634 - MGP_CBAJ_P0052714 Grin1 protein_coding protein_coding MGP_CBAJ_T0052715.1 MGP_CBAJ_G0025150.1 mouse_genomes_project 2 24730793 24758609 - MGP_CBAJ_P0052715 Grin1 protein_coding protein_coding MGP_CBAJ_T0052716.1 MGP_CBAJ_G0025150.1 mouse_genomes_project 2 24730793 24758609 - MGP_CBAJ_P0052716 Grin1 protein_coding protein_coding MGP_CBAJ_T0052717.1 MGP_CBAJ_G0025150.1 mouse_genomes_project 2 24730793 24758634 - MGP_CBAJ_P0052717 Grin1 protein_coding protein_coding MGP_CBAJ_T0052718.1 MGP_CBAJ_G0025150.1 mouse_genomes_project 2 24730793 24758701 - MGP_CBAJ_P0052718 Grin1 protein_coding protein_coding MGP_CBAJ_T0052719.1 MGP_CBAJ_G0025150.1 mouse_genomes_project 2 24730793 24758609 - MGP_CBAJ_P0052719 Grin1 protein_coding protein_coding MGP_CBAJ_T0052720.1 MGP_CBAJ_G0025150.1 mouse_genomes_project 2 24730793 24758609 - MGP_CBAJ_P0052720 Grin1 protein_coding protein_coding MGP_CBAJ_T0052721.1 MGP_CBAJ_G0025150.1 mouse_genomes_project 2 24730793 24758634 - MGP_CBAJ_P0052721 Grin1 protein_coding protein_coding MGP_CBAJ_T0052722.1 MGP_CBAJ_G0025150.1 mouse_genomes_project 2 24730969 24743326 - Grin1 protein_coding processed_transcript MGP_CBAJ_T0052723.1 MGP_CBAJ_G0025150.1 mouse_genomes_project 2 24731670 24736292 - Grin1 protein_coding processed_transcript MGP_CBAJ_T0052724.1 MGP_CBAJ_G0025150.1 mouse_genomes_project 2 24743021 24744614 - Grin1 protein_coding processed_transcript MGP_CBAJ_T0052725.1 MGP_CBAJ_G0025150.1 mouse_genomes_project 2 24743124 24744911 - Grin1 protein_coding processed_transcript MGP_CBAJ_T0052726.1 MGP_CBAJ_G0025150.1 mouse_genomes_project 2 24750314 24758640 - Grin1 protein_coding processed_transcript MGP_CBAJ_T0052727.1 MGP_CBAJ_G0025150.1 mouse_genomes_project 2 24753914 24758677 - Grin1 protein_coding processed_transcript MGP_CBAJ_T0013561.1 MGP_CBAJ_G0011673.1 mouse_genomes_project 2 133219727 133220687 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007145.1 MGP_CBAJ_G0005855.1 mouse_genomes_project 2 83573536 83575897 + Gm13661 lincRNA lincRNA MGP_CBAJ_T0003976.1 MGP_CBAJ_G0003526.1 mouse_genomes_project 2 115268641 115269741 + Gm13954 antisense antisense MGP_CBAJ_T0053812.1 MGP_CBAJ_G0025328.1 mouse_genomes_project 2 33287862 33329943 + MGP_CBAJ_P0053812 Eng protein_coding protein_coding MGP_CBAJ_T0053813.1 MGP_CBAJ_G0025328.1 mouse_genomes_project 2 33287862 33330483 + MGP_CBAJ_P0053813 Eng protein_coding protein_coding MGP_CBAJ_T0053814.1 MGP_CBAJ_G0025328.1 mouse_genomes_project 2 33287889 33330494 + MGP_CBAJ_P0053814 Eng protein_coding protein_coding MGP_CBAJ_T0053815.1 MGP_CBAJ_G0025328.1 mouse_genomes_project 2 33288260 33291635 + Eng protein_coding processed_transcript MGP_CBAJ_T0053816.1 MGP_CBAJ_G0025328.1 mouse_genomes_project 2 33320621 33321524 + Eng protein_coding retained_intron MGP_CBAJ_T0053817.1 MGP_CBAJ_G0025328.1 mouse_genomes_project 2 33321144 33329080 + MGP_CBAJ_P0053817 Eng protein_coding protein_coding MGP_CBAJ_T0052143.1 MGP_CBAJ_G0025051.1 mouse_genomes_project 2 7951001 7991018 - MGP_CBAJ_P0052143 Itih2 protein_coding protein_coding MGP_CBAJ_T0052144.1 MGP_CBAJ_G0025051.1 mouse_genomes_project 2 7965205 7991430 - MGP_CBAJ_P0052144 Itih2 protein_coding protein_coding MGP_CBAJ_T0052145.1 MGP_CBAJ_G0025051.1 mouse_genomes_project 2 7986635 7991751 - MGP_CBAJ_P0052145 Itih2 protein_coding protein_coding MGP_CBAJ_T0053596.1 MGP_CBAJ_G0025295.1 mouse_genomes_project 2 31605029 31657199 + MGP_CBAJ_P0053596 Ncs1 protein_coding protein_coding MGP_CBAJ_T0053597.1 MGP_CBAJ_G0025295.1 mouse_genomes_project 2 31605372 31653529 + MGP_CBAJ_P0053597 Ncs1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059148.1 MGP_CBAJ_G0026631.1 mouse_genomes_project 2 188433283 188440701 + MGP_CBAJ_P0059148 Pfdn4 protein_coding protein_coding MGP_CBAJ_T0059149.1 MGP_CBAJ_G0026631.1 mouse_genomes_project 2 188433284 188440914 + MGP_CBAJ_P0059149 Pfdn4 protein_coding protein_coding MGP_CBAJ_T0055426.1 MGP_CBAJ_G0025701.1 mouse_genomes_project 2 93967541 93968480 - MGP_CBAJ_P0055426 Olfr1106 protein_coding protein_coding MGP_CBAJ_T0058809.1 MGP_CBAJ_G0026566.1 mouse_genomes_project 2 181554661 181557671 + MGP_CBAJ_P0058809 Ube2c protein_coding protein_coding MGP_CBAJ_T0058810.1 MGP_CBAJ_G0026566.1 mouse_genomes_project 2 181554666 181563473 + MGP_CBAJ_P0058810 Ube2c protein_coding protein_coding MGP_CBAJ_T0056221.1 MGP_CBAJ_G0025937.1 mouse_genomes_project 2 119246288 119310240 + MGP_CBAJ_P0056221 Kif18a protein_coding protein_coding MGP_CBAJ_T0056222.1 MGP_CBAJ_G0025937.1 mouse_genomes_project 2 119246376 119261582 + Kif18a protein_coding retained_intron MGP_CBAJ_T0056223.1 MGP_CBAJ_G0025937.1 mouse_genomes_project 2 119246390 119273008 + Kif18a protein_coding retained_intron MGP_CBAJ_T0056224.1 MGP_CBAJ_G0025937.1 mouse_genomes_project 2 119246402 119276341 + Kif18a protein_coding retained_intron MGP_CBAJ_T0056225.1 MGP_CBAJ_G0025937.1 mouse_genomes_project 2 119246419 119261314 + Kif18a protein_coding retained_intron MGP_CBAJ_T0056226.1 MGP_CBAJ_G0025937.1 mouse_genomes_project 2 119257573 119261582 + Kif18a protein_coding retained_intron MGP_CBAJ_T0017507.1 MGP_CBAJ_G0015154.1 mouse_genomes_project 2 32566334 32589017 - Gm16534 processed_transcript processed_transcript MGP_CBAJ_T0017508.1 MGP_CBAJ_G0015154.1 mouse_genomes_project 2 32567129 32589764 - Gm16534 processed_transcript processed_transcript MGP_CBAJ_T0097805.1 MGP_CBAJ_G0036078.1 mouse_genomes_project 2 98701388 98701661 + pseudogene pseudogene MGP_CBAJ_T0059488.1 MGP_CBAJ_G0026714.1 mouse_genomes_project 2 200390909 200407959 + MGP_CBAJ_P0059488 Zgpat protein_coding protein_coding MGP_CBAJ_T0059489.1 MGP_CBAJ_G0026714.1 mouse_genomes_project 2 200391386 200407947 + MGP_CBAJ_P0059489 Zgpat protein_coding protein_coding MGP_CBAJ_T0059490.1 MGP_CBAJ_G0026714.1 mouse_genomes_project 2 200391404 200410793 + MGP_CBAJ_P0059490 Zgpat protein_coding nonsense_mediated_decay MGP_CBAJ_T0059491.1 MGP_CBAJ_G0026714.1 mouse_genomes_project 2 200391433 200410791 + Zgpat protein_coding retained_intron MGP_CBAJ_T0059492.1 MGP_CBAJ_G0026714.1 mouse_genomes_project 2 200405558 200406984 + Zgpat protein_coding retained_intron MGP_CBAJ_T0059493.1 MGP_CBAJ_G0026714.1 mouse_genomes_project 2 200406803 200407903 + MGP_CBAJ_P0059493 Zgpat protein_coding protein_coding MGP_CBAJ_T0056277.1 MGP_CBAJ_G0025959.1 mouse_genomes_project 2 121590052 121590741 + MGP_CBAJ_P0056277 protein_coding protein_coding MGP_CBAJ_T0013337.1 MGP_CBAJ_G0011449.1 mouse_genomes_project 2 43877542 43877775 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0056342.1 MGP_CBAJ_G0025994.1 mouse_genomes_project 2 124299241 124355390 - MGP_CBAJ_P0056342 Scg5 protein_coding protein_coding MGP_CBAJ_T0056343.1 MGP_CBAJ_G0025994.1 mouse_genomes_project 2 124353607 124355031 - Scg5 protein_coding processed_transcript MGP_CBAJ_T0010222.1 MGP_CBAJ_G0008360.1 mouse_genomes_project 2 8375013 8375112 + Mir466f-3 miRNA miRNA MGP_CBAJ_T0055180.1 MGP_CBAJ_G0025592.1 mouse_genomes_project 2 85519912 85562591 + MGP_CBAJ_P0055180 Ssfa2 protein_coding protein_coding MGP_CBAJ_T0055181.1 MGP_CBAJ_G0025592.1 mouse_genomes_project 2 85519986 85562591 + MGP_CBAJ_P0055181 Ssfa2 protein_coding protein_coding MGP_CBAJ_T0055182.1 MGP_CBAJ_G0025592.1 mouse_genomes_project 2 85520015 85562591 + MGP_CBAJ_P0055182 Ssfa2 protein_coding protein_coding MGP_CBAJ_T0055183.1 MGP_CBAJ_G0025592.1 mouse_genomes_project 2 85520021 85521006 + Ssfa2 protein_coding processed_transcript MGP_CBAJ_T0055184.1 MGP_CBAJ_G0025592.1 mouse_genomes_project 2 85523753 85562591 + Ssfa2 protein_coding processed_transcript MGP_CBAJ_T0007321.1 MGP_CBAJ_G0005997.1 mouse_genomes_project 2 188600156 188610180 - Gm14264 lincRNA lincRNA MGP_CBAJ_T0013466.1 MGP_CBAJ_G0011578.1 mouse_genomes_project 2 94150332 94151794 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0059153.1 MGP_CBAJ_G0026635.1 mouse_genomes_project 2 190417584 190420203 + MGP_CBAJ_P0059153 Mc3r protein_coding protein_coding MGP_CBAJ_T0101809.1 MGP_CBAJ_G0039840.1 mouse_genomes_project 2 94912096 94913018 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0017556.1 MGP_CBAJ_G0015188.1 mouse_genomes_project 2 100937239 101001586 - Gm13791 processed_transcript processed_transcript MGP_CBAJ_T0007050.1 MGP_CBAJ_G0005779.1 mouse_genomes_project 2 21879179 21891418 + lincRNA lincRNA MGP_CBAJ_T0007051.1 MGP_CBAJ_G0005779.1 mouse_genomes_project 2 21891116 21891386 + lincRNA lincRNA MGP_CBAJ_T0055362.1 MGP_CBAJ_G0025639.1 mouse_genomes_project 2 91992739 91993684 - MGP_CBAJ_P0055362 Olfr994 protein_coding protein_coding MGP_CBAJ_T0003858.1 MGP_CBAJ_G0003443.1 mouse_genomes_project 2 26872842 26892564 - Dbhos antisense antisense MGP_CBAJ_T0052409.1 MGP_CBAJ_G0025092.1 mouse_genomes_project 2 18132417 18245865 + MGP_CBAJ_P0052409 Armc3 protein_coding protein_coding MGP_CBAJ_T0052410.1 MGP_CBAJ_G0025092.1 mouse_genomes_project 2 18132417 18245865 + MGP_CBAJ_P0052410 Armc3 protein_coding protein_coding MGP_CBAJ_T0007278.1 MGP_CBAJ_G0005960.1 mouse_genomes_project 2 177205904 177207012 - Gm14228 lincRNA lincRNA MGP_CBAJ_T0057937.1 MGP_CBAJ_G0026360.1 mouse_genomes_project 2 167561808 167565603 - MGP_CBAJ_P0057937 Defb26 protein_coding protein_coding MGP_CBAJ_T0100350.1 MGP_CBAJ_G0038605.1 mouse_genomes_project 2 31545145 31545269 + Gm22516 snoRNA snoRNA MGP_CBAJ_T0007108.1 MGP_CBAJ_G0005823.1 mouse_genomes_project 2 63693670 63695367 + Gm13572 lincRNA lincRNA MGP_CBAJ_T0100401.1 MGP_CBAJ_G0038656.1 mouse_genomes_project 2 158367304 158367542 - Snord17 snoRNA snoRNA MGP_CBAJ_T0058017.1 MGP_CBAJ_G0026387.1 mouse_genomes_project 2 168426369 168464982 + MGP_CBAJ_P0058017 Pofut1 protein_coding protein_coding MGP_CBAJ_T0058018.1 MGP_CBAJ_G0026387.1 mouse_genomes_project 2 168426377 168458394 + MGP_CBAJ_P0058018 Pofut1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058019.1 MGP_CBAJ_G0026387.1 mouse_genomes_project 2 168426377 168458394 + MGP_CBAJ_P0058019 Pofut1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058020.1 MGP_CBAJ_G0026387.1 mouse_genomes_project 2 168426387 168450766 + MGP_CBAJ_P0058020 Pofut1 protein_coding protein_coding MGP_CBAJ_T0058021.1 MGP_CBAJ_G0026387.1 mouse_genomes_project 2 168426405 168438205 + Pofut1 protein_coding retained_intron MGP_CBAJ_T0058022.1 MGP_CBAJ_G0026387.1 mouse_genomes_project 2 168426414 168461238 + MGP_CBAJ_P0058022 Pofut1 protein_coding protein_coding MGP_CBAJ_T0058023.1 MGP_CBAJ_G0026387.1 mouse_genomes_project 2 168446343 168462021 + MGP_CBAJ_P0058023 Pofut1 protein_coding protein_coding MGP_CBAJ_T0058024.1 MGP_CBAJ_G0026387.1 mouse_genomes_project 2 168446433 168462798 + MGP_CBAJ_P0058024 Pofut1 protein_coding protein_coding MGP_CBAJ_T0100346.1 MGP_CBAJ_G0038601.1 mouse_genomes_project 2 26250962 26251094 - Snora17 snoRNA snoRNA MGP_CBAJ_T0013641.1 MGP_CBAJ_G0011753.1 mouse_genomes_project 2 167677810 167678027 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101299.1 MGP_CBAJ_G0039413.1 mouse_genomes_project 2 191965778 192053880 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101300.1 MGP_CBAJ_G0039413.1 mouse_genomes_project 2 191966896 192053880 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101301.1 MGP_CBAJ_G0039413.1 mouse_genomes_project 2 191967657 192022676 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101302.1 MGP_CBAJ_G0039413.1 mouse_genomes_project 2 191971361 192053880 - transcribed_unprocessed_pseudogene retained_intron MGP_CBAJ_T0101303.1 MGP_CBAJ_G0039413.1 mouse_genomes_project 2 191972308 191980191 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101304.1 MGP_CBAJ_G0039413.1 mouse_genomes_project 2 191973041 191980742 - transcribed_unprocessed_pseudogene retained_intron MGP_CBAJ_T0101305.1 MGP_CBAJ_G0039413.1 mouse_genomes_project 2 191985534 192053880 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101306.1 MGP_CBAJ_G0039413.1 mouse_genomes_project 2 191985534 192053709 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101307.1 MGP_CBAJ_G0039413.1 mouse_genomes_project 2 191986561 191998248 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101308.1 MGP_CBAJ_G0039413.1 mouse_genomes_project 2 191986575 192053981 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101309.1 MGP_CBAJ_G0039413.1 mouse_genomes_project 2 191997909 192053845 - transcribed_unprocessed_pseudogene retained_intron MGP_CBAJ_T0101310.1 MGP_CBAJ_G0039413.1 mouse_genomes_project 2 192008132 192053876 - transcribed_unprocessed_pseudogene retained_intron MGP_CBAJ_T0054126.1 MGP_CBAJ_G0025382.1 mouse_genomes_project 2 37698151 37699087 + MGP_CBAJ_P0054126 Olfr345 protein_coding protein_coding MGP_CBAJ_T0057639.1 MGP_CBAJ_G0026277.1 mouse_genomes_project 2 157966468 158000243 + MGP_CBAJ_P0057639 Dstn protein_coding protein_coding MGP_CBAJ_T0017503.1 MGP_CBAJ_G0015152.1 mouse_genomes_project 2 30968984 30981176 - processed_transcript processed_transcript MGP_CBAJ_T0017504.1 MGP_CBAJ_G0015152.1 mouse_genomes_project 2 30968987 30975555 - processed_transcript retained_intron MGP_CBAJ_T0013605.1 MGP_CBAJ_G0011717.1 mouse_genomes_project 2 157131114 157131734 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0058234.1 MGP_CBAJ_G0026438.1 mouse_genomes_project 2 171330778 171376310 + MGP_CBAJ_P0058234 Mmp24 protein_coding protein_coding MGP_CBAJ_T0058235.1 MGP_CBAJ_G0026438.1 mouse_genomes_project 2 171365180 171368321 + Mmp24 protein_coding retained_intron MGP_CBAJ_T0013522.1 MGP_CBAJ_G0011634.1 mouse_genomes_project 2 113977245 113977432 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055475.1 MGP_CBAJ_G0025740.1 mouse_genomes_project 2 95025209 95031655 - MGP_CBAJ_P0055475 Olfr1154 protein_coding protein_coding MGP_CBAJ_T0001046.1 MGP_CBAJ_G0000978.1 mouse_genomes_project 2 73489639 73493280 + TEC TEC MGP_CBAJ_T0004061.1 MGP_CBAJ_G0003589.1 mouse_genomes_project 2 171129975 171132610 + Gssos1 antisense antisense MGP_CBAJ_T0010347.1 MGP_CBAJ_G0008485.1 mouse_genomes_project 2 172060110 172060202 - Gm22759 miRNA miRNA MGP_CBAJ_T0010303.1 MGP_CBAJ_G0008441.1 mouse_genomes_project 2 91229897 91229961 - Mir130a miRNA miRNA MGP_CBAJ_T0054628.1 MGP_CBAJ_G0025483.1 mouse_genomes_project 2 66437456 66528805 - MGP_CBAJ_P0054628 Fap protein_coding protein_coding MGP_CBAJ_T0054629.1 MGP_CBAJ_G0025483.1 mouse_genomes_project 2 66437626 66528710 - Fap protein_coding processed_transcript MGP_CBAJ_T0054630.1 MGP_CBAJ_G0025483.1 mouse_genomes_project 2 66437636 66439938 - MGP_CBAJ_P0054630 Fap protein_coding nonsense_mediated_decay MGP_CBAJ_T0054631.1 MGP_CBAJ_G0025483.1 mouse_genomes_project 2 66437697 66528581 - MGP_CBAJ_P0054631 Fap protein_coding protein_coding MGP_CBAJ_T0054632.1 MGP_CBAJ_G0025483.1 mouse_genomes_project 2 66437697 66528581 - MGP_CBAJ_P0054632 Fap protein_coding protein_coding MGP_CBAJ_T0054633.1 MGP_CBAJ_G0025483.1 mouse_genomes_project 2 66437697 66528581 - MGP_CBAJ_P0054633 Fap protein_coding protein_coding MGP_CBAJ_T0054634.1 MGP_CBAJ_G0025483.1 mouse_genomes_project 2 66470678 66516402 - Fap protein_coding retained_intron MGP_CBAJ_T0054635.1 MGP_CBAJ_G0025483.1 mouse_genomes_project 2 66479112 66528653 - Fap protein_coding retained_intron MGP_CBAJ_T0054636.1 MGP_CBAJ_G0025483.1 mouse_genomes_project 2 66496634 66528290 - MGP_CBAJ_P0054636 Fap protein_coding protein_coding MGP_CBAJ_T0003917.1 MGP_CBAJ_G0003490.1 mouse_genomes_project 2 71760841 71859602 - Gm13599 antisense antisense MGP_CBAJ_T0052546.1 MGP_CBAJ_G0025121.1 mouse_genomes_project 2 23683837 23711534 + MGP_CBAJ_P0052546 Psd4 protein_coding protein_coding MGP_CBAJ_T0052547.1 MGP_CBAJ_G0025121.1 mouse_genomes_project 2 23683867 23732230 + MGP_CBAJ_P0052547 Psd4 protein_coding protein_coding MGP_CBAJ_T0052548.1 MGP_CBAJ_G0025121.1 mouse_genomes_project 2 23702607 23726005 + MGP_CBAJ_P0052548 Psd4 protein_coding protein_coding MGP_CBAJ_T0052549.1 MGP_CBAJ_G0025121.1 mouse_genomes_project 2 23702610 23711687 + MGP_CBAJ_P0052549 Psd4 protein_coding protein_coding MGP_CBAJ_T0052550.1 MGP_CBAJ_G0025121.1 mouse_genomes_project 2 23702611 23714596 + Psd4 protein_coding processed_transcript MGP_CBAJ_T0052551.1 MGP_CBAJ_G0025121.1 mouse_genomes_project 2 23702628 23711581 + MGP_CBAJ_P0052551 Psd4 protein_coding protein_coding MGP_CBAJ_T0052552.1 MGP_CBAJ_G0025121.1 mouse_genomes_project 2 23703844 23711867 + MGP_CBAJ_P0052552 Psd4 protein_coding protein_coding MGP_CBAJ_T0052553.1 MGP_CBAJ_G0025121.1 mouse_genomes_project 2 23703892 23725476 + MGP_CBAJ_P0052553 Psd4 protein_coding protein_coding MGP_CBAJ_T0052554.1 MGP_CBAJ_G0025121.1 mouse_genomes_project 2 23718311 23720528 + MGP_CBAJ_P0052554 Psd4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052555.1 MGP_CBAJ_G0025121.1 mouse_genomes_project 2 23722904 23724283 + Psd4 protein_coding retained_intron MGP_CBAJ_T0059434.1 MGP_CBAJ_G0026704.1 mouse_genomes_project 2 200142677 200153337 - MGP_CBAJ_P0059434 Eef1a2 protein_coding protein_coding MGP_CBAJ_T0000988.1 MGP_CBAJ_G0000920.1 mouse_genomes_project 2 7411053 7411749 - TEC TEC MGP_CBAJ_T0004074.1 MGP_CBAJ_G0003602.1 mouse_genomes_project 2 180038721 180039770 + 2310001K24Rik antisense antisense MGP_CBAJ_T0004075.1 MGP_CBAJ_G0003602.1 mouse_genomes_project 2 180039309 180039768 + 2310001K24Rik antisense antisense MGP_CBAJ_T0055508.1 MGP_CBAJ_G0025771.1 mouse_genomes_project 2 96348706 96349633 - MGP_CBAJ_P0055508 Olfr1208 protein_coding protein_coding MGP_CBAJ_T0057090.1 MGP_CBAJ_G0026148.1 mouse_genomes_project 2 139435101 139467556 - MGP_CBAJ_P0057090 Ncaph protein_coding protein_coding MGP_CBAJ_T0057091.1 MGP_CBAJ_G0026148.1 mouse_genomes_project 2 139435119 139445159 - Ncaph protein_coding retained_intron MGP_CBAJ_T0057092.1 MGP_CBAJ_G0026148.1 mouse_genomes_project 2 139435242 139467504 - MGP_CBAJ_P0057092 Ncaph protein_coding nonsense_mediated_decay MGP_CBAJ_T0057093.1 MGP_CBAJ_G0026148.1 mouse_genomes_project 2 139439077 139449461 - Ncaph protein_coding retained_intron MGP_CBAJ_T0057094.1 MGP_CBAJ_G0026148.1 mouse_genomes_project 2 139454428 139455576 - Ncaph protein_coding retained_intron MGP_CBAJ_T0057095.1 MGP_CBAJ_G0026148.1 mouse_genomes_project 2 139461208 139467499 - Ncaph protein_coding processed_transcript MGP_CBAJ_T0056258.1 MGP_CBAJ_G0025945.1 mouse_genomes_project 2 120706763 121048941 - MGP_CBAJ_P0056258 Ano3 protein_coding protein_coding MGP_CBAJ_T0056259.1 MGP_CBAJ_G0025945.1 mouse_genomes_project 2 120742922 121048391 - Ano3 protein_coding retained_intron MGP_CBAJ_T0056260.1 MGP_CBAJ_G0025945.1 mouse_genomes_project 2 120767851 120819324 - MGP_CBAJ_P0056260 Ano3 protein_coding protein_coding MGP_CBAJ_T0052991.1 MGP_CBAJ_G0025200.1 mouse_genomes_project 2 25980740 25987063 - MGP_CBAJ_P0052991 Inpp5e protein_coding protein_coding MGP_CBAJ_T0052992.1 MGP_CBAJ_G0025200.1 mouse_genomes_project 2 25981278 25996553 - Inpp5e protein_coding processed_transcript MGP_CBAJ_T0052993.1 MGP_CBAJ_G0025200.1 mouse_genomes_project 2 25981521 25996572 - Inpp5e protein_coding processed_transcript MGP_CBAJ_T0052994.1 MGP_CBAJ_G0025200.1 mouse_genomes_project 2 25982063 25995956 - MGP_CBAJ_P0052994 Inpp5e protein_coding protein_coding MGP_CBAJ_T0052995.1 MGP_CBAJ_G0025200.1 mouse_genomes_project 2 25986851 25988068 - Inpp5e protein_coding processed_transcript MGP_CBAJ_T0052996.1 MGP_CBAJ_G0025200.1 mouse_genomes_project 2 25987004 25989798 - MGP_CBAJ_P0052996 Inpp5e protein_coding protein_coding MGP_CBAJ_T0013262.1 MGP_CBAJ_G0011374.1 mouse_genomes_project 2 16777871 16778136 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0058559.1 MGP_CBAJ_G0026489.1 mouse_genomes_project 2 174489096 174494672 + MGP_CBAJ_P0058559 Adig protein_coding protein_coding MGP_CBAJ_T0058560.1 MGP_CBAJ_G0026489.1 mouse_genomes_project 2 174489137 174494672 + MGP_CBAJ_P0058560 Adig protein_coding protein_coding MGP_CBAJ_T0058561.1 MGP_CBAJ_G0026489.1 mouse_genomes_project 2 174489223 174492383 + Adig protein_coding processed_transcript MGP_CBAJ_T0010289.1 MGP_CBAJ_G0008427.1 mouse_genomes_project 2 55138662 55138812 + Gm22095 miRNA miRNA MGP_CBAJ_T0013588.1 MGP_CBAJ_G0011700.1 mouse_genomes_project 2 145711623 145712511 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0054432.1 MGP_CBAJ_G0025449.1 mouse_genomes_project 2 55801481 56104370 + MGP_CBAJ_P0054432 Fmnl2 protein_coding protein_coding MGP_CBAJ_T0054433.1 MGP_CBAJ_G0025449.1 mouse_genomes_project 2 55801489 56102448 + MGP_CBAJ_P0054433 Fmnl2 protein_coding protein_coding MGP_CBAJ_T0054434.1 MGP_CBAJ_G0025449.1 mouse_genomes_project 2 55801489 56104771 + MGP_CBAJ_P0054434 Fmnl2 protein_coding protein_coding MGP_CBAJ_T0054435.1 MGP_CBAJ_G0025449.1 mouse_genomes_project 2 55801764 56104377 + MGP_CBAJ_P0054435 Fmnl2 protein_coding unknown_likely_coding MGP_CBAJ_T0054436.1 MGP_CBAJ_G0025449.1 mouse_genomes_project 2 56085058 56104370 + MGP_CBAJ_P0054436 Fmnl2 protein_coding protein_coding MGP_CBAJ_T0054437.1 MGP_CBAJ_G0025449.1 mouse_genomes_project 2 56090910 56104370 + MGP_CBAJ_P0054437 Fmnl2 protein_coding protein_coding MGP_CBAJ_T0054438.1 MGP_CBAJ_G0025449.1 mouse_genomes_project 2 56096579 56102773 + MGP_CBAJ_P0054438 Fmnl2 protein_coding protein_coding MGP_CBAJ_T0053752.1 MGP_CBAJ_G0025317.1 mouse_genomes_project 2 32973172 32976262 - Lcn2 protein_coding processed_transcript MGP_CBAJ_T0053753.1 MGP_CBAJ_G0025317.1 mouse_genomes_project 2 32973172 32976337 - MGP_CBAJ_P0053753 Lcn2 protein_coding protein_coding MGP_CBAJ_T0053754.1 MGP_CBAJ_G0025317.1 mouse_genomes_project 2 32973178 32974539 - Lcn2 protein_coding retained_intron MGP_CBAJ_T0053755.1 MGP_CBAJ_G0025317.1 mouse_genomes_project 2 32973722 32974647 - Lcn2 protein_coding retained_intron MGP_CBAJ_T0053756.1 MGP_CBAJ_G0025317.1 mouse_genomes_project 2 32973984 32976792 - MGP_CBAJ_P0053756 Lcn2 protein_coding protein_coding MGP_CBAJ_T0053757.1 MGP_CBAJ_G0025317.1 mouse_genomes_project 2 32975095 32976299 - Lcn2 protein_coding retained_intron MGP_CBAJ_T0013275.1 MGP_CBAJ_G0011387.1 mouse_genomes_project 2 19065665 19066464 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0058785.1 MGP_CBAJ_G0026552.1 mouse_genomes_project 2 181299836 181306089 - MGP_CBAJ_P0058785 Spint3 protein_coding protein_coding MGP_CBAJ_T0013519.1 MGP_CBAJ_G0011631.1 mouse_genomes_project 2 113105675 113105914 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057924.1 MGP_CBAJ_G0026352.1 mouse_genomes_project 2 167362546 167369162 - MGP_CBAJ_P0057924 Trib3 protein_coding protein_coding MGP_CBAJ_T0057925.1 MGP_CBAJ_G0026352.1 mouse_genomes_project 2 167364872 167369118 - Trib3 protein_coding processed_transcript MGP_CBAJ_T0057926.1 MGP_CBAJ_G0026352.1 mouse_genomes_project 2 167368057 167369100 - Trib3 protein_coding retained_intron MGP_CBAJ_T0001025.1 MGP_CBAJ_G0000957.1 mouse_genomes_project 2 24267722 24272121 - TEC TEC MGP_CBAJ_T0056867.1 MGP_CBAJ_G0026094.1 mouse_genomes_project 2 132956949 132978102 - MGP_CBAJ_P0056867 protein_coding protein_coding MGP_CBAJ_T0013626.1 MGP_CBAJ_G0011738.1 mouse_genomes_project 2 162127223 162127662 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0056113.1 MGP_CBAJ_G0025913.1 mouse_genomes_project 2 113430351 113432335 + MGP_CBAJ_P0056113 A930018P22Rik protein_coding protein_coding MGP_CBAJ_T0001018.1 MGP_CBAJ_G0000950.1 mouse_genomes_project 2 13427578 13428904 + TEC TEC MGP_CBAJ_T0013511.1 MGP_CBAJ_G0011623.1 mouse_genomes_project 2 111325086 111326054 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013489.1 MGP_CBAJ_G0011601.1 mouse_genomes_project 2 100958171 100958594 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0058465.1 MGP_CBAJ_G0026471.1 mouse_genomes_project 2 172954524 173020164 - MGP_CBAJ_P0058465 Rbl1 protein_coding protein_coding MGP_CBAJ_T0058466.1 MGP_CBAJ_G0026471.1 mouse_genomes_project 2 172976947 173020186 - Rbl1 protein_coding retained_intron MGP_CBAJ_T0058467.1 MGP_CBAJ_G0026471.1 mouse_genomes_project 2 172986852 173020178 - Rbl1 protein_coding retained_intron MGP_CBAJ_T0058468.1 MGP_CBAJ_G0026471.1 mouse_genomes_project 2 173003053 173007174 - Rbl1 protein_coding retained_intron MGP_CBAJ_T0056297.1 MGP_CBAJ_G0025979.1 mouse_genomes_project 2 122410099 122411038 - MGP_CBAJ_P0056297 Olfr1314 protein_coding protein_coding MGP_CBAJ_T0057974.1 MGP_CBAJ_G0026376.1 mouse_genomes_project 2 168046269 168060101 + MGP_CBAJ_P0057974 Mylk2 protein_coding protein_coding MGP_CBAJ_T0052015.1 MGP_CBAJ_G0025028.1 mouse_genomes_project 2 2052469 2090232 + MGP_CBAJ_P0052015 Sephs1 protein_coding protein_coding MGP_CBAJ_T0052016.1 MGP_CBAJ_G0025028.1 mouse_genomes_project 2 2053169 2087812 + MGP_CBAJ_P0052016 Sephs1 protein_coding protein_coding MGP_CBAJ_T0052017.1 MGP_CBAJ_G0025028.1 mouse_genomes_project 2 2054981 2060209 + Sephs1 protein_coding processed_transcript MGP_CBAJ_T0052018.1 MGP_CBAJ_G0025028.1 mouse_genomes_project 2 2055308 2085208 + Sephs1 protein_coding processed_transcript MGP_CBAJ_T0055375.1 MGP_CBAJ_G0025652.1 mouse_genomes_project 2 92482562 92483138 + MGP_CBAJ_P0055375 protein_coding protein_coding MGP_CBAJ_T0056915.1 MGP_CBAJ_G0026107.1 mouse_genomes_project 2 133836578 133869510 + MGP_CBAJ_P0056915 Sord protein_coding protein_coding MGP_CBAJ_T0007115.1 MGP_CBAJ_G0005830.1 mouse_genomes_project 2 71607138 71653001 - Gm13598 lincRNA lincRNA MGP_CBAJ_T0052509.1 MGP_CBAJ_G0025108.1 mouse_genomes_project 2 22284340 22325913 - MGP_CBAJ_P0052509 Mastl protein_coding protein_coding MGP_CBAJ_T0052510.1 MGP_CBAJ_G0025108.1 mouse_genomes_project 2 22306592 22325786 - Mastl protein_coding processed_transcript MGP_CBAJ_T0003918.1 MGP_CBAJ_G0003491.1 mouse_genomes_project 2 71951991 71980469 - Gm13601 antisense antisense MGP_CBAJ_T0013602.1 MGP_CBAJ_G0011714.1 mouse_genomes_project 2 154902211 154902997 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0057928.1 MGP_CBAJ_G0026354.1 mouse_genomes_project 2 167424007 167428460 - MGP_CBAJ_P0057928 Sox12 protein_coding protein_coding MGP_CBAJ_T0057929.1 MGP_CBAJ_G0026354.1 mouse_genomes_project 2 167424010 167428443 - MGP_CBAJ_P0057929 Sox12 protein_coding protein_coding MGP_CBAJ_T0013612.1 MGP_CBAJ_G0011724.1 mouse_genomes_project 2 158470920 158471323 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0057180.1 MGP_CBAJ_G0026171.1 mouse_genomes_project 2 140941861 140943115 + MGP_CBAJ_P0057180 Gm29010 protein_coding protein_coding MGP_CBAJ_T0010300.1 MGP_CBAJ_G0008438.1 mouse_genomes_project 2 82075433 82075536 + Gm23164 miRNA miRNA MGP_CBAJ_T0052663.1 MGP_CBAJ_G0025136.1 mouse_genomes_project 2 24645245 24646690 - Stpg3 protein_coding processed_transcript MGP_CBAJ_T0052664.1 MGP_CBAJ_G0025136.1 mouse_genomes_project 2 24645246 24647670 - Stpg3 protein_coding processed_transcript MGP_CBAJ_T0052665.1 MGP_CBAJ_G0025136.1 mouse_genomes_project 2 24645597 24647669 - MGP_CBAJ_P0052665 Stpg3 protein_coding protein_coding MGP_CBAJ_T0052666.1 MGP_CBAJ_G0025136.1 mouse_genomes_project 2 24645800 24647676 - MGP_CBAJ_P0052666 Stpg3 protein_coding protein_coding MGP_CBAJ_T0052667.1 MGP_CBAJ_G0025136.1 mouse_genomes_project 2 24645956 24647630 - Stpg3 protein_coding processed_transcript MGP_CBAJ_T0057686.1 MGP_CBAJ_G0026288.1 mouse_genomes_project 2 158699123 158712863 + MGP_CBAJ_P0057686 Sec23b protein_coding protein_coding MGP_CBAJ_T0057687.1 MGP_CBAJ_G0026288.1 mouse_genomes_project 2 158699150 158737793 + MGP_CBAJ_P0057687 Sec23b protein_coding protein_coding MGP_CBAJ_T0057688.1 MGP_CBAJ_G0026288.1 mouse_genomes_project 2 158699175 158704304 + MGP_CBAJ_P0057688 Sec23b protein_coding protein_coding MGP_CBAJ_T0057689.1 MGP_CBAJ_G0026288.1 mouse_genomes_project 2 158699206 158704413 + Sec23b protein_coding processed_transcript MGP_CBAJ_T0057690.1 MGP_CBAJ_G0026288.1 mouse_genomes_project 2 158699213 158711646 + MGP_CBAJ_P0057690 Sec23b protein_coding protein_coding MGP_CBAJ_T0057691.1 MGP_CBAJ_G0026288.1 mouse_genomes_project 2 158699228 158709488 + MGP_CBAJ_P0057691 Sec23b protein_coding protein_coding MGP_CBAJ_T0057692.1 MGP_CBAJ_G0026288.1 mouse_genomes_project 2 158709734 158737793 + Sec23b protein_coding processed_transcript MGP_CBAJ_T0057693.1 MGP_CBAJ_G0026288.1 mouse_genomes_project 2 158721958 158728212 + Sec23b protein_coding processed_transcript MGP_CBAJ_T0007248.1 MGP_CBAJ_G0005938.1 mouse_genomes_project 2 162441854 162479398 - 9030622O22Rik lincRNA lincRNA MGP_CBAJ_T0007249.1 MGP_CBAJ_G0005938.1 mouse_genomes_project 2 162475900 162556580 - 9030622O22Rik lincRNA lincRNA MGP_CBAJ_T0007250.1 MGP_CBAJ_G0005938.1 mouse_genomes_project 2 162476054 162554649 - 9030622O22Rik lincRNA lincRNA MGP_CBAJ_T0054619.1 MGP_CBAJ_G0025481.1 mouse_genomes_project 2 66249218 66341349 - MGP_CBAJ_P0054619 Dpp4 protein_coding protein_coding MGP_CBAJ_T0054620.1 MGP_CBAJ_G0025481.1 mouse_genomes_project 2 66255106 66270945 - Dpp4 protein_coding retained_intron MGP_CBAJ_T0054621.1 MGP_CBAJ_G0025481.1 mouse_genomes_project 2 66277879 66283332 - Dpp4 protein_coding processed_transcript MGP_CBAJ_T0054622.1 MGP_CBAJ_G0025481.1 mouse_genomes_project 2 66290276 66303804 - Dpp4 protein_coding retained_intron MGP_CBAJ_T0054623.1 MGP_CBAJ_G0025481.1 mouse_genomes_project 2 66299815 66341139 - Dpp4 protein_coding retained_intron MGP_CBAJ_T0054624.1 MGP_CBAJ_G0025481.1 mouse_genomes_project 2 66336819 66340977 - Dpp4 protein_coding processed_transcript MGP_CBAJ_T0055538.1 MGP_CBAJ_G0025795.1 mouse_genomes_project 2 96934924 96935872 - MGP_CBAJ_P0055538 Olfr1238 protein_coding protein_coding MGP_CBAJ_T0054144.1 MGP_CBAJ_G0025398.1 mouse_genomes_project 2 38187344 38188313 - MGP_CBAJ_P0054144 Olfr361 protein_coding protein_coding MGP_CBAJ_T0007143.1 MGP_CBAJ_G0005853.1 mouse_genomes_project 2 81219392 81219971 - Gm13656 lincRNA lincRNA MGP_CBAJ_T0053973.1 MGP_CBAJ_G0025352.1 mouse_genomes_project 2 35677038 35682616 + MGP_CBAJ_P0053973 Hspa5 protein_coding protein_coding MGP_CBAJ_T0053974.1 MGP_CBAJ_G0025352.1 mouse_genomes_project 2 35677163 35681600 + MGP_CBAJ_P0053974 Hspa5 protein_coding protein_coding MGP_CBAJ_T0053975.1 MGP_CBAJ_G0025352.1 mouse_genomes_project 2 35677167 35678376 + MGP_CBAJ_P0053975 Hspa5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053976.1 MGP_CBAJ_G0025352.1 mouse_genomes_project 2 35677649 35679261 + Hspa5 protein_coding retained_intron MGP_CBAJ_T0053977.1 MGP_CBAJ_G0025352.1 mouse_genomes_project 2 35678734 35679402 + Hspa5 protein_coding retained_intron MGP_CBAJ_T0053978.1 MGP_CBAJ_G0025352.1 mouse_genomes_project 2 35679915 35680684 + Hspa5 protein_coding retained_intron MGP_CBAJ_T0058732.1 MGP_CBAJ_G0026532.1 mouse_genomes_project 2 180788467 180794941 - MGP_CBAJ_P0058732 Wfdc5 protein_coding protein_coding MGP_CBAJ_T0058733.1 MGP_CBAJ_G0026532.1 mouse_genomes_project 2 180789607 180794797 - MGP_CBAJ_P0058733 Wfdc5 protein_coding protein_coding MGP_CBAJ_T0052885.1 MGP_CBAJ_G0025184.1 mouse_genomes_project 2 25338620 25341005 + MGP_CBAJ_P0052885 Lcn9 protein_coding protein_coding MGP_CBAJ_T0057658.1 MGP_CBAJ_G0026281.1 mouse_genomes_project 2 158372314 158381192 + MGP_CBAJ_P0057658 Mgme1 protein_coding unknown_likely_coding MGP_CBAJ_T0099136.1 MGP_CBAJ_G0037391.1 mouse_genomes_project 2 154153296 154153403 - Gm23846 snRNA snRNA MGP_CBAJ_T0013589.1 MGP_CBAJ_G0011701.1 mouse_genomes_project 2 146035230 146036232 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017586.1 MGP_CBAJ_G0015200.1 mouse_genomes_project 2 125263289 125307060 + Gm13972 processed_transcript processed_transcript MGP_CBAJ_T0001031.1 MGP_CBAJ_G0000963.1 mouse_genomes_project 2 36780732 36783747 - TEC TEC MGP_CBAJ_T0013348.1 MGP_CBAJ_G0011460.1 mouse_genomes_project 2 51840336 51841111 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100398.1 MGP_CBAJ_G0038653.1 mouse_genomes_project 2 142974278 142974350 + Snord57 snoRNA snoRNA MGP_CBAJ_T0059380.1 MGP_CBAJ_G0026698.1 mouse_genomes_project 2 199906027 199911019 + Birc7 protein_coding retained_intron MGP_CBAJ_T0059381.1 MGP_CBAJ_G0026698.1 mouse_genomes_project 2 199906027 199911022 + MGP_CBAJ_P0059381 Birc7 protein_coding protein_coding MGP_CBAJ_T0057425.1 MGP_CBAJ_G0026229.1 mouse_genomes_project 2 144131024 144183392 - MGP_CBAJ_P0057425 Rnf24 protein_coding protein_coding MGP_CBAJ_T0057426.1 MGP_CBAJ_G0026229.1 mouse_genomes_project 2 144131025 144145763 - MGP_CBAJ_P0057426 Rnf24 protein_coding protein_coding MGP_CBAJ_T0057427.1 MGP_CBAJ_G0026229.1 mouse_genomes_project 2 144131027 144161737 - MGP_CBAJ_P0057427 Rnf24 protein_coding protein_coding MGP_CBAJ_T0057428.1 MGP_CBAJ_G0026229.1 mouse_genomes_project 2 144135606 144183373 - MGP_CBAJ_P0057428 Rnf24 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057429.1 MGP_CBAJ_G0026229.1 mouse_genomes_project 2 144145005 144183403 - Rnf24 protein_coding retained_intron MGP_CBAJ_T0010253.1 MGP_CBAJ_G0008391.1 mouse_genomes_project 2 21758156 21758224 + Mir3967 miRNA miRNA MGP_CBAJ_T0053637.1 MGP_CBAJ_G0025302.1 mouse_genomes_project 2 32259185 32263586 - MGP_CBAJ_P0053637 Qrfp protein_coding protein_coding MGP_CBAJ_T0007241.1 MGP_CBAJ_G0005932.1 mouse_genomes_project 2 152087852 152155583 + Gm14061 lincRNA lincRNA MGP_CBAJ_T0000990.1 MGP_CBAJ_G0000922.1 mouse_genomes_project 2 8963427 8963538 - TEC TEC MGP_CBAJ_T0056975.1 MGP_CBAJ_G0026121.1 mouse_genomes_project 2 137135502 137159890 + MGP_CBAJ_P0056975 Slc24a5 protein_coding protein_coding MGP_CBAJ_T0056976.1 MGP_CBAJ_G0026121.1 mouse_genomes_project 2 137136617 137154527 + Slc24a5 protein_coding processed_transcript MGP_CBAJ_T0056977.1 MGP_CBAJ_G0026121.1 mouse_genomes_project 2 137149253 137154380 + Slc24a5 protein_coding retained_intron MGP_CBAJ_T0053088.1 MGP_CBAJ_G0025216.1 mouse_genomes_project 2 26666389 26677297 - MGP_CBAJ_P0053088 Rexo4 protein_coding protein_coding MGP_CBAJ_T0053089.1 MGP_CBAJ_G0025216.1 mouse_genomes_project 2 26666392 26677297 - MGP_CBAJ_P0053089 Rexo4 protein_coding protein_coding MGP_CBAJ_T0053090.1 MGP_CBAJ_G0025216.1 mouse_genomes_project 2 26667152 26669413 - Rexo4 protein_coding processed_transcript MGP_CBAJ_T0053091.1 MGP_CBAJ_G0025216.1 mouse_genomes_project 2 26667254 26668511 - Rexo4 protein_coding processed_transcript MGP_CBAJ_T0053092.1 MGP_CBAJ_G0025216.1 mouse_genomes_project 2 26667367 26677190 - MGP_CBAJ_P0053092 Rexo4 protein_coding protein_coding MGP_CBAJ_T0053093.1 MGP_CBAJ_G0025216.1 mouse_genomes_project 2 26667827 26669146 - Rexo4 protein_coding processed_transcript MGP_CBAJ_T0053094.1 MGP_CBAJ_G0025216.1 mouse_genomes_project 2 26669159 26677189 - Rexo4 protein_coding processed_transcript MGP_CBAJ_T0053095.1 MGP_CBAJ_G0025216.1 mouse_genomes_project 2 26670866 26673177 - Rexo4 protein_coding processed_transcript MGP_CBAJ_T0053096.1 MGP_CBAJ_G0025216.1 mouse_genomes_project 2 26675789 26677235 - Rexo4 protein_coding processed_transcript MGP_CBAJ_T0054044.1 MGP_CBAJ_G0025362.1 mouse_genomes_project 2 36126511 36149666 - MGP_CBAJ_P0054044 Rab14 protein_coding protein_coding MGP_CBAJ_T0054045.1 MGP_CBAJ_G0025362.1 mouse_genomes_project 2 36129818 36149666 - MGP_CBAJ_P0054045 Rab14 protein_coding protein_coding MGP_CBAJ_T0054046.1 MGP_CBAJ_G0025362.1 mouse_genomes_project 2 36130674 36132596 - Rab14 protein_coding processed_transcript MGP_CBAJ_T0054047.1 MGP_CBAJ_G0025362.1 mouse_genomes_project 2 36131735 36132694 - Rab14 protein_coding processed_transcript MGP_CBAJ_T0054048.1 MGP_CBAJ_G0025362.1 mouse_genomes_project 2 36132148 36149518 - Rab14 protein_coding retained_intron MGP_CBAJ_T0054049.1 MGP_CBAJ_G0025362.1 mouse_genomes_project 2 36134830 36141209 - Rab14 protein_coding processed_transcript MGP_CBAJ_T0054050.1 MGP_CBAJ_G0025362.1 mouse_genomes_project 2 36136251 36139968 - Rab14 protein_coding retained_intron MGP_CBAJ_T0054051.1 MGP_CBAJ_G0025362.1 mouse_genomes_project 2 36138445 36149335 - Rab14 protein_coding processed_transcript MGP_CBAJ_T0054052.1 MGP_CBAJ_G0025362.1 mouse_genomes_project 2 36140066 36141389 - Rab14 protein_coding processed_transcript MGP_CBAJ_T0054053.1 MGP_CBAJ_G0025362.1 mouse_genomes_project 2 36144525 36149528 - Rab14 protein_coding retained_intron MGP_CBAJ_T0054054.1 MGP_CBAJ_G0025362.1 mouse_genomes_project 2 36148419 36149524 - Rab14 protein_coding processed_transcript MGP_CBAJ_T0055775.1 MGP_CBAJ_G0025853.1 mouse_genomes_project 2 99556191 99578786 + MGP_CBAJ_P0055775 Arhgap1 protein_coding protein_coding MGP_CBAJ_T0055776.1 MGP_CBAJ_G0025853.1 mouse_genomes_project 2 99556449 99578786 + MGP_CBAJ_P0055776 Arhgap1 protein_coding protein_coding MGP_CBAJ_T0055777.1 MGP_CBAJ_G0025853.1 mouse_genomes_project 2 99556553 99578786 + MGP_CBAJ_P0055777 Arhgap1 protein_coding protein_coding MGP_CBAJ_T0055778.1 MGP_CBAJ_G0025853.1 mouse_genomes_project 2 99557829 99560863 + Arhgap1 protein_coding processed_transcript MGP_CBAJ_T0055779.1 MGP_CBAJ_G0025853.1 mouse_genomes_project 2 99557829 99560865 + Arhgap1 protein_coding processed_transcript MGP_CBAJ_T0055780.1 MGP_CBAJ_G0025853.1 mouse_genomes_project 2 99558078 99574671 + Arhgap1 protein_coding processed_transcript MGP_CBAJ_T0055781.1 MGP_CBAJ_G0025853.1 mouse_genomes_project 2 99559539 99578762 + MGP_CBAJ_P0055781 Arhgap1 protein_coding protein_coding MGP_CBAJ_T0055782.1 MGP_CBAJ_G0025853.1 mouse_genomes_project 2 99574858 99577704 + Arhgap1 protein_coding processed_transcript MGP_CBAJ_T0055783.1 MGP_CBAJ_G0025853.1 mouse_genomes_project 2 99576273 99577390 + Arhgap1 protein_coding processed_transcript MGP_CBAJ_T0054136.1 MGP_CBAJ_G0025391.1 mouse_genomes_project 2 37969450 37970386 - MGP_CBAJ_P0054136 Olfr353 protein_coding protein_coding MGP_CBAJ_T0001063.1 MGP_CBAJ_G0000994.1 mouse_genomes_project 2 150081457 150081723 + TEC TEC MGP_CBAJ_T0054903.1 MGP_CBAJ_G0025536.1 mouse_genomes_project 2 76439474 76523221 + MGP_CBAJ_P0054903 Metap1d protein_coding protein_coding MGP_CBAJ_T0054904.1 MGP_CBAJ_G0025536.1 mouse_genomes_project 2 76439531 76513993 + Metap1d protein_coding processed_transcript MGP_CBAJ_T0054905.1 MGP_CBAJ_G0025536.1 mouse_genomes_project 2 76439549 76523224 + Metap1d protein_coding processed_transcript MGP_CBAJ_T0054906.1 MGP_CBAJ_G0025536.1 mouse_genomes_project 2 76439561 76522815 + Metap1d protein_coding processed_transcript MGP_CBAJ_T0054907.1 MGP_CBAJ_G0025536.1 mouse_genomes_project 2 76508307 76515190 + Metap1d protein_coding processed_transcript MGP_CBAJ_T0054908.1 MGP_CBAJ_G0025536.1 mouse_genomes_project 2 76513449 76514322 + Metap1d protein_coding processed_transcript MGP_CBAJ_T0003816.1 MGP_CBAJ_G0003412.1 mouse_genomes_project 2 3241218 3246630 + Gm13267 antisense antisense MGP_CBAJ_T0003817.1 MGP_CBAJ_G0003412.1 mouse_genomes_project 2 3241308 3245398 + Gm13267 antisense antisense MGP_CBAJ_T0101804.1 MGP_CBAJ_G0039835.1 mouse_genomes_project 2 93309772 93311309 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0055402.1 MGP_CBAJ_G0025678.1 mouse_genomes_project 2 93056582 93057524 - MGP_CBAJ_P0055402 Olfr1056 protein_coding protein_coding MGP_CBAJ_T0055065.1 MGP_CBAJ_G0025572.1 mouse_genomes_project 2 81473259 81479530 - MGP_CBAJ_P0055065 protein_coding protein_coding MGP_CBAJ_T0013349.1 MGP_CBAJ_G0011461.1 mouse_genomes_project 2 52217922 52218400 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0056987.1 MGP_CBAJ_G0026123.1 mouse_genomes_project 2 137185299 137200006 - MGP_CBAJ_P0056987 Gm9833 protein_coding protein_coding MGP_CBAJ_T0056478.1 MGP_CBAJ_G0026026.1 mouse_genomes_project 2 130204648 130230225 + MGP_CBAJ_P0056478 Casc5 protein_coding protein_coding MGP_CBAJ_T0056479.1 MGP_CBAJ_G0026026.1 mouse_genomes_project 2 130204648 130266478 + MGP_CBAJ_P0056479 Casc5 protein_coding protein_coding MGP_CBAJ_T0056480.1 MGP_CBAJ_G0026026.1 mouse_genomes_project 2 130204676 130226923 + MGP_CBAJ_P0056480 Casc5 protein_coding protein_coding MGP_CBAJ_T0056481.1 MGP_CBAJ_G0026026.1 mouse_genomes_project 2 130204679 130233872 + MGP_CBAJ_P0056481 Casc5 protein_coding protein_coding MGP_CBAJ_T0056482.1 MGP_CBAJ_G0026026.1 mouse_genomes_project 2 130214862 130267854 + MGP_CBAJ_P0056482 Casc5 protein_coding protein_coding MGP_CBAJ_T0055092.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82321706 82616600 - MGP_CBAJ_P0055092 Ttn protein_coding protein_coding MGP_CBAJ_T0055093.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82321706 82616600 - MGP_CBAJ_P0055093 Ttn protein_coding protein_coding MGP_CBAJ_T0055094.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82321710 82616692 - MGP_CBAJ_P0055094 Ttn protein_coding protein_coding MGP_CBAJ_T0055095.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82322757 82614327 - MGP_CBAJ_P0055095 Ttn protein_coding protein_coding MGP_CBAJ_T0055096.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82322757 82614327 - MGP_CBAJ_P0055096 Ttn protein_coding unknown_likely_coding MGP_CBAJ_T0055097.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82436887 82567673 - MGP_CBAJ_P0055097 Ttn protein_coding protein_coding MGP_CBAJ_T0055098.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82437395 82520770 - MGP_CBAJ_P0055098 Ttn protein_coding protein_coding MGP_CBAJ_T0055099.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82437429 82496434 - MGP_CBAJ_P0055099 Ttn protein_coding protein_coding MGP_CBAJ_T0055100.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82437430 82496434 - MGP_CBAJ_P0055100 Ttn protein_coding protein_coding MGP_CBAJ_T0055101.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82437430 82496434 - MGP_CBAJ_P0055101 Ttn protein_coding protein_coding MGP_CBAJ_T0055102.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82437430 82496434 - MGP_CBAJ_P0055102 Ttn protein_coding protein_coding MGP_CBAJ_T0055103.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82437448 82496434 - MGP_CBAJ_P0055103 Ttn protein_coding protein_coding MGP_CBAJ_T0055104.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82445476 82450888 - MGP_CBAJ_P0055104 Ttn protein_coding protein_coding MGP_CBAJ_T0055105.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82446875 82467128 - MGP_CBAJ_P0055105 Ttn protein_coding protein_coding MGP_CBAJ_T0055106.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82454352 82455155 - MGP_CBAJ_P0055106 Ttn protein_coding protein_coding MGP_CBAJ_T0055107.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82457347 82458159 - MGP_CBAJ_P0055107 Ttn protein_coding protein_coding MGP_CBAJ_T0055108.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82461939 82462789 - MGP_CBAJ_P0055108 Ttn protein_coding protein_coding MGP_CBAJ_T0055109.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82461939 82464871 - MGP_CBAJ_P0055109 Ttn protein_coding protein_coding MGP_CBAJ_T0055110.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82470200 82475221 - MGP_CBAJ_P0055110 Ttn protein_coding protein_coding MGP_CBAJ_T0055111.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82477321 82501457 - MGP_CBAJ_P0055111 Ttn protein_coding protein_coding MGP_CBAJ_T0055112.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82519595 82520352 - Ttn protein_coding processed_transcript MGP_CBAJ_T0055113.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82546845 82616600 - MGP_CBAJ_P0055113 Ttn protein_coding protein_coding MGP_CBAJ_T0055114.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82571356 82573957 - Ttn protein_coding retained_intron MGP_CBAJ_T0055115.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82595497 82616692 - Ttn protein_coding retained_intron MGP_CBAJ_T0055116.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82596303 82616692 - MGP_CBAJ_P0055116 Ttn protein_coding protein_coding MGP_CBAJ_T0055117.1 MGP_CBAJ_G0025583.1 mouse_genomes_project 2 82604264 82616692 - Ttn protein_coding retained_intron MGP_CBAJ_T0007141.1 MGP_CBAJ_G0005851.1 mouse_genomes_project 2 80889137 80897264 + Gm13658 lincRNA lincRNA MGP_CBAJ_T0054148.1 MGP_CBAJ_G0025402.1 mouse_genomes_project 2 38328080 38329010 + MGP_CBAJ_P0054148 Olfr366 protein_coding protein_coding MGP_CBAJ_T0055431.1 MGP_CBAJ_G0025706.1 mouse_genomes_project 2 94096326 94097265 - MGP_CBAJ_P0055431 Olfr1111 protein_coding protein_coding MGP_CBAJ_T0053491.1 MGP_CBAJ_G0025281.1 mouse_genomes_project 2 30587226 30631960 + MGP_CBAJ_P0053491 Ptpa protein_coding protein_coding MGP_CBAJ_T0053492.1 MGP_CBAJ_G0025281.1 mouse_genomes_project 2 30587318 30631961 + MGP_CBAJ_P0053492 Ptpa protein_coding protein_coding MGP_CBAJ_T0053493.1 MGP_CBAJ_G0025281.1 mouse_genomes_project 2 30587324 30613575 + MGP_CBAJ_P0053493 Ptpa protein_coding nonsense_mediated_decay MGP_CBAJ_T0053494.1 MGP_CBAJ_G0025281.1 mouse_genomes_project 2 30587329 30631772 + MGP_CBAJ_P0053494 Ptpa protein_coding protein_coding MGP_CBAJ_T0053495.1 MGP_CBAJ_G0025281.1 mouse_genomes_project 2 30587383 30631959 + Ptpa protein_coding retained_intron MGP_CBAJ_T0053496.1 MGP_CBAJ_G0025281.1 mouse_genomes_project 2 30587489 30602913 + Ptpa protein_coding processed_transcript MGP_CBAJ_T0053497.1 MGP_CBAJ_G0025281.1 mouse_genomes_project 2 30602864 30622256 + Ptpa protein_coding retained_intron MGP_CBAJ_T0053498.1 MGP_CBAJ_G0025281.1 mouse_genomes_project 2 30622383 30631105 + MGP_CBAJ_P0053498 Ptpa protein_coding nonsense_mediated_decay MGP_CBAJ_T0053499.1 MGP_CBAJ_G0025281.1 mouse_genomes_project 2 30626007 30631286 + MGP_CBAJ_P0053499 Ptpa protein_coding protein_coding MGP_CBAJ_T0053500.1 MGP_CBAJ_G0025281.1 mouse_genomes_project 2 30626889 30630961 + MGP_CBAJ_P0053500 Ptpa protein_coding protein_coding MGP_CBAJ_T0053501.1 MGP_CBAJ_G0025281.1 mouse_genomes_project 2 30627373 30631054 + Ptpa protein_coding processed_transcript MGP_CBAJ_T0053502.1 MGP_CBAJ_G0025281.1 mouse_genomes_project 2 30629810 30631229 + Ptpa protein_coding processed_transcript MGP_CBAJ_T0053503.1 MGP_CBAJ_G0025281.1 mouse_genomes_project 2 30629870 30630931 + Ptpa protein_coding processed_transcript MGP_CBAJ_T0003832.1 MGP_CBAJ_G0003425.1 mouse_genomes_project 2 18393732 18396612 - Gm13344 antisense antisense MGP_CBAJ_T0059170.1 MGP_CBAJ_G0026643.1 mouse_genomes_project 2 190772164 190773567 + protein_coding processed_transcript MGP_CBAJ_T0011391.1 MGP_CBAJ_G0009529.1 mouse_genomes_project 2 172026545 172026761 + Gm22316 misc_RNA misc_RNA MGP_CBAJ_T0010218.1 MGP_CBAJ_G0008356.1 mouse_genomes_project 2 8371709 8371830 + Mir669d miRNA miRNA MGP_CBAJ_T0010273.1 MGP_CBAJ_G0008411.1 mouse_genomes_project 2 32731135 32731214 + Gm27805 miRNA miRNA MGP_CBAJ_T0001032.1 MGP_CBAJ_G0000964.1 mouse_genomes_project 2 36870355 36873343 + TEC TEC MGP_CBAJ_T0007269.1 MGP_CBAJ_G0005953.1 mouse_genomes_project 2 172244149 172251045 + Gm14168 lincRNA lincRNA MGP_CBAJ_T0052047.1 MGP_CBAJ_G0025035.1 mouse_genomes_project 2 3122137 3189196 - MGP_CBAJ_P0052047 Cdc123 protein_coding protein_coding MGP_CBAJ_T0052048.1 MGP_CBAJ_G0025035.1 mouse_genomes_project 2 3122508 3126442 - Cdc123 protein_coding processed_transcript MGP_CBAJ_T0052049.1 MGP_CBAJ_G0025035.1 mouse_genomes_project 2 3126204 3132211 - Cdc123 protein_coding retained_intron MGP_CBAJ_T0052050.1 MGP_CBAJ_G0025035.1 mouse_genomes_project 2 3132668 3140503 - Cdc123 protein_coding processed_transcript MGP_CBAJ_T0052051.1 MGP_CBAJ_G0025035.1 mouse_genomes_project 2 3132787 3174113 - Cdc123 protein_coding retained_intron MGP_CBAJ_T0052052.1 MGP_CBAJ_G0025035.1 mouse_genomes_project 2 3139235 3174608 - MGP_CBAJ_P0052052 Cdc123 protein_coding protein_coding MGP_CBAJ_T0052053.1 MGP_CBAJ_G0025035.1 mouse_genomes_project 2 3140398 3188973 - Cdc123 protein_coding retained_intron MGP_CBAJ_T0052054.1 MGP_CBAJ_G0025035.1 mouse_genomes_project 2 3153891 3155886 - Cdc123 protein_coding retained_intron MGP_CBAJ_T0052055.1 MGP_CBAJ_G0025035.1 mouse_genomes_project 2 3155582 3188883 - Cdc123 protein_coding processed_transcript MGP_CBAJ_T0055330.1 MGP_CBAJ_G0025629.1 mouse_genomes_project 2 91500038 91505549 + Prg3 protein_coding processed_transcript MGP_CBAJ_T0055331.1 MGP_CBAJ_G0025629.1 mouse_genomes_project 2 91500038 91505648 + MGP_CBAJ_P0055331 Prg3 protein_coding protein_coding MGP_CBAJ_T0057826.1 MGP_CBAJ_G0026330.1 mouse_genomes_project 2 165626851 165671997 + MGP_CBAJ_P0057826 Pygb protein_coding protein_coding MGP_CBAJ_T0057827.1 MGP_CBAJ_G0026330.1 mouse_genomes_project 2 165629176 165654174 + Pygb protein_coding processed_transcript MGP_CBAJ_T0057828.1 MGP_CBAJ_G0026330.1 mouse_genomes_project 2 165655494 165657933 + Pygb protein_coding retained_intron MGP_CBAJ_T0057829.1 MGP_CBAJ_G0026330.1 mouse_genomes_project 2 165663845 165668712 + Pygb protein_coding retained_intron MGP_CBAJ_T0057830.1 MGP_CBAJ_G0026330.1 mouse_genomes_project 2 165668626 165670873 + Pygb protein_coding retained_intron MGP_CBAJ_T0055535.1 MGP_CBAJ_G0025794.1 mouse_genomes_project 2 96870359 96871304 - MGP_CBAJ_P0055535 Olfr1234 protein_coding protein_coding MGP_CBAJ_T0055536.1 MGP_CBAJ_G0025794.1 mouse_genomes_project 2 96870359 96872738 - MGP_CBAJ_P0055536 Olfr1234 protein_coding protein_coding MGP_CBAJ_T0055537.1 MGP_CBAJ_G0025794.1 mouse_genomes_project 2 96871440 96872742 - Olfr1234 protein_coding processed_transcript MGP_CBAJ_T0101803.1 MGP_CBAJ_G0039834.1 mouse_genomes_project 2 93306144 93307086 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0059456.1 MGP_CBAJ_G0026711.1 mouse_genomes_project 2 200327172 200335255 - MGP_CBAJ_P0059456 Stmn3 protein_coding protein_coding MGP_CBAJ_T0100425.1 MGP_CBAJ_G0038680.1 mouse_genomes_project 2 185842102 185842239 + Gm22704 snoRNA snoRNA MGP_CBAJ_T0057800.1 MGP_CBAJ_G0026321.1 mouse_genomes_project 2 164510732 164596143 + MGP_CBAJ_P0057800 Syndig1 protein_coding protein_coding MGP_CBAJ_T0057802.1 MGP_CBAJ_G0026321.1 mouse_genomes_project 2 164512309 164709999 + MGP_CBAJ_P0057802 Syndig1 protein_coding protein_coding MGP_CBAJ_T0057803.1 MGP_CBAJ_G0026321.1 mouse_genomes_project 2 164512390 164596184 + MGP_CBAJ_P0057803 Syndig1 protein_coding protein_coding MGP_CBAJ_T0057804.1 MGP_CBAJ_G0026321.1 mouse_genomes_project 2 164512422 164596180 + MGP_CBAJ_P0057804 Syndig1 protein_coding protein_coding MGP_CBAJ_T0057805.1 MGP_CBAJ_G0026321.1 mouse_genomes_project 2 164512443 164596310 + MGP_CBAJ_P0057805 Syndig1 protein_coding protein_coding MGP_CBAJ_T0057806.1 MGP_CBAJ_G0026321.1 mouse_genomes_project 2 164592179 164709999 + MGP_CBAJ_P0057806 Syndig1 protein_coding protein_coding MGP_CBAJ_T0057529.1 MGP_CBAJ_G0026252.1 mouse_genomes_project 2 147792753 147846223 - MGP_CBAJ_P0057529 Tmx4 protein_coding protein_coding MGP_CBAJ_T0057530.1 MGP_CBAJ_G0026252.1 mouse_genomes_project 2 147797571 147846210 - Tmx4 protein_coding processed_transcript MGP_CBAJ_T0057531.1 MGP_CBAJ_G0026252.1 mouse_genomes_project 2 147806106 147846119 - MGP_CBAJ_P0057531 Tmx4 protein_coding protein_coding MGP_CBAJ_T0057532.1 MGP_CBAJ_G0026252.1 mouse_genomes_project 2 147841585 147846168 - MGP_CBAJ_P0057532 Tmx4 protein_coding protein_coding MGP_CBAJ_T0003827.1 MGP_CBAJ_G0003421.1 mouse_genomes_project 2 13144604 13172800 - Gm10848 antisense antisense MGP_CBAJ_T0007079.1 MGP_CBAJ_G0005800.1 mouse_genomes_project 2 34924298 34938346 - Gm38389 lincRNA lincRNA MGP_CBAJ_T0058080.1 MGP_CBAJ_G0026404.1 mouse_genomes_project 2 169486622 169493021 + MGP_CBAJ_P0058080 protein_coding protein_coding MGP_CBAJ_T0058081.1 MGP_CBAJ_G0026404.1 mouse_genomes_project 2 169486641 169488976 + protein_coding processed_transcript MGP_CBAJ_T0058082.1 MGP_CBAJ_G0026404.1 mouse_genomes_project 2 169488149 169491547 + protein_coding processed_transcript MGP_CBAJ_T0007288.1 MGP_CBAJ_G0005970.1 mouse_genomes_project 2 183018732 183033385 - Platr29 lincRNA lincRNA MGP_CBAJ_T0052866.1 MGP_CBAJ_G0025173.1 mouse_genomes_project 2 25115114 25118479 - MGP_CBAJ_P0052866 Fcna protein_coding protein_coding MGP_CBAJ_T0052867.1 MGP_CBAJ_G0025173.1 mouse_genomes_project 2 25115413 25117737 - Fcna protein_coding processed_transcript MGP_CBAJ_T0011366.1 MGP_CBAJ_G0009504.1 mouse_genomes_project 2 37144797 37144940 - Gm27953 misc_RNA misc_RNA MGP_CBAJ_T0013488.1 MGP_CBAJ_G0011600.1 mouse_genomes_project 2 100603313 100603725 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007183.1 MGP_CBAJ_G0005884.1 mouse_genomes_project 2 115010575 115011432 + 4930527A07Rik lincRNA lincRNA MGP_CBAJ_T0013267.1 MGP_CBAJ_G0011379.1 mouse_genomes_project 2 17520015 17520332 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0052011.1 MGP_CBAJ_G0025027.1 mouse_genomes_project 2 1872297 1961483 + MGP_CBAJ_P0052011 Bend7 protein_coding protein_coding MGP_CBAJ_T0052012.1 MGP_CBAJ_G0025027.1 mouse_genomes_project 2 1872300 1949849 + MGP_CBAJ_P0052012 Bend7 protein_coding protein_coding MGP_CBAJ_T0052013.1 MGP_CBAJ_G0025027.1 mouse_genomes_project 2 1872564 1961845 + MGP_CBAJ_P0052013 Bend7 protein_coding protein_coding MGP_CBAJ_T0052014.1 MGP_CBAJ_G0025027.1 mouse_genomes_project 2 1913628 1963146 + Bend7 protein_coding processed_transcript MGP_CBAJ_T0055581.1 MGP_CBAJ_G0025824.1 mouse_genomes_project 2 97786804 97787719 - MGP_CBAJ_P0055581 Olfr1270 protein_coding protein_coding MGP_CBAJ_T0101802.1 MGP_CBAJ_G0039833.1 mouse_genomes_project 2 93267527 93268414 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0053679.1 MGP_CBAJ_G0025310.1 mouse_genomes_project 2 32795741 32815364 + MGP_CBAJ_P0053679 Pomt1 protein_coding protein_coding MGP_CBAJ_T0053680.1 MGP_CBAJ_G0025310.1 mouse_genomes_project 2 32795794 32796852 + Pomt1 protein_coding retained_intron MGP_CBAJ_T0053681.1 MGP_CBAJ_G0025310.1 mouse_genomes_project 2 32795823 32803182 + Pomt1 protein_coding retained_intron MGP_CBAJ_T0053682.1 MGP_CBAJ_G0025310.1 mouse_genomes_project 2 32795836 32815360 + Pomt1 protein_coding retained_intron MGP_CBAJ_T0053683.1 MGP_CBAJ_G0025310.1 mouse_genomes_project 2 32796188 32802807 + MGP_CBAJ_P0053683 Pomt1 protein_coding protein_coding MGP_CBAJ_T0053684.1 MGP_CBAJ_G0025310.1 mouse_genomes_project 2 32796490 32802897 + MGP_CBAJ_P0053684 Pomt1 protein_coding protein_coding MGP_CBAJ_T0053685.1 MGP_CBAJ_G0025310.1 mouse_genomes_project 2 32803543 32810094 + MGP_CBAJ_P0053685 Pomt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053686.1 MGP_CBAJ_G0025310.1 mouse_genomes_project 2 32804474 32807876 + Pomt1 protein_coding retained_intron MGP_CBAJ_T0053687.1 MGP_CBAJ_G0025310.1 mouse_genomes_project 2 32806757 32810956 + Pomt1 protein_coding retained_intron MGP_CBAJ_T0053688.1 MGP_CBAJ_G0025310.1 mouse_genomes_project 2 32807847 32812982 + MGP_CBAJ_P0053688 Pomt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053689.1 MGP_CBAJ_G0025310.1 mouse_genomes_project 2 32810457 32811877 + Pomt1 protein_coding retained_intron MGP_CBAJ_T0099121.1 MGP_CBAJ_G0037376.1 mouse_genomes_project 2 127873554 127873689 - Gm25514 snRNA snRNA MGP_CBAJ_T0056302.1 MGP_CBAJ_G0025981.1 mouse_genomes_project 2 122626006 122637341 - MGP_CBAJ_P0056302 Nutm1 protein_coding protein_coding MGP_CBAJ_T0007277.1 MGP_CBAJ_G0005959.1 mouse_genomes_project 2 176183909 176208055 + 9130015L21Rik lincRNA lincRNA MGP_CBAJ_T0055401.1 MGP_CBAJ_G0025677.1 mouse_genomes_project 2 93044900 93045836 - MGP_CBAJ_P0055401 Olfr1055 protein_coding protein_coding MGP_CBAJ_T0052461.1 MGP_CBAJ_G0025100.1 mouse_genomes_project 2 20349943 20359204 + MGP_CBAJ_P0052461 Thnsl1 protein_coding protein_coding MGP_CBAJ_T0052462.1 MGP_CBAJ_G0025100.1 mouse_genomes_project 2 20349958 20358571 + MGP_CBAJ_P0052462 Thnsl1 protein_coding protein_coding MGP_CBAJ_T0052463.1 MGP_CBAJ_G0025100.1 mouse_genomes_project 2 20349978 20357474 + MGP_CBAJ_P0052463 Thnsl1 protein_coding protein_coding MGP_CBAJ_T0052464.1 MGP_CBAJ_G0025100.1 mouse_genomes_project 2 20349992 20355737 + MGP_CBAJ_P0052464 Thnsl1 protein_coding protein_coding MGP_CBAJ_T0052465.1 MGP_CBAJ_G0025100.1 mouse_genomes_project 2 20350006 20358503 + MGP_CBAJ_P0052465 Thnsl1 protein_coding protein_coding MGP_CBAJ_T0013576.1 MGP_CBAJ_G0011688.1 mouse_genomes_project 2 143665355 143666623 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055389.1 MGP_CBAJ_G0025665.1 mouse_genomes_project 2 92826452 92827394 - MGP_CBAJ_P0055389 Olfr1042 protein_coding protein_coding MGP_CBAJ_T0013623.1 MGP_CBAJ_G0011735.1 mouse_genomes_project 2 161685870 161686846 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101793.1 MGP_CBAJ_G0039824.1 mouse_genomes_project 2 92225848 92226793 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0056623.1 MGP_CBAJ_G0026059.1 mouse_genomes_project 2 131621459 131637285 - Pla2g4f protein_coding retained_intron MGP_CBAJ_T0056624.1 MGP_CBAJ_G0026059.1 mouse_genomes_project 2 131621468 131639090 - MGP_CBAJ_P0056624 Pla2g4f protein_coding protein_coding MGP_CBAJ_T0053066.1 MGP_CBAJ_G0025212.1 mouse_genomes_project 2 26618736 26620115 - Surf1 protein_coding retained_intron MGP_CBAJ_T0053067.1 MGP_CBAJ_G0025212.1 mouse_genomes_project 2 26618738 26621824 - MGP_CBAJ_P0053067 Surf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053068.1 MGP_CBAJ_G0025212.1 mouse_genomes_project 2 26618738 26621656 - MGP_CBAJ_P0053068 Surf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053069.1 MGP_CBAJ_G0025212.1 mouse_genomes_project 2 26618738 26621886 - MGP_CBAJ_P0053069 Surf1 protein_coding protein_coding MGP_CBAJ_T0053070.1 MGP_CBAJ_G0025212.1 mouse_genomes_project 2 26618932 26621676 - MGP_CBAJ_P0053070 Surf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053071.1 MGP_CBAJ_G0025212.1 mouse_genomes_project 2 26618932 26621701 - MGP_CBAJ_P0053071 Surf1 protein_coding protein_coding MGP_CBAJ_T0053072.1 MGP_CBAJ_G0025212.1 mouse_genomes_project 2 26619586 26621667 - Surf1 protein_coding retained_intron MGP_CBAJ_T0053073.1 MGP_CBAJ_G0025212.1 mouse_genomes_project 2 26619830 26620848 - Surf1 protein_coding retained_intron MGP_CBAJ_T0053074.1 MGP_CBAJ_G0025212.1 mouse_genomes_project 2 26620213 26621688 - MGP_CBAJ_P0053074 Surf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053075.1 MGP_CBAJ_G0025212.1 mouse_genomes_project 2 26620812 26621701 - MGP_CBAJ_P0053075 Surf1 protein_coding protein_coding MGP_CBAJ_T0007189.1 MGP_CBAJ_G0005890.1 mouse_genomes_project 2 118932760 118935505 + Gm13923 lincRNA lincRNA MGP_CBAJ_T0057172.1 MGP_CBAJ_G0026170.1 mouse_genomes_project 2 140581974 140585965 + Bcl2l11 protein_coding processed_transcript MGP_CBAJ_T0057173.1 MGP_CBAJ_G0026170.1 mouse_genomes_project 2 140581974 140587444 + MGP_CBAJ_P0057173 Bcl2l11 protein_coding protein_coding MGP_CBAJ_T0057174.1 MGP_CBAJ_G0026170.1 mouse_genomes_project 2 140581974 140616887 + MGP_CBAJ_P0057174 Bcl2l11 protein_coding protein_coding MGP_CBAJ_T0057175.1 MGP_CBAJ_G0026170.1 mouse_genomes_project 2 140581975 140618474 + MGP_CBAJ_P0057175 Bcl2l11 protein_coding protein_coding MGP_CBAJ_T0057176.1 MGP_CBAJ_G0026170.1 mouse_genomes_project 2 140581976 140614351 + MGP_CBAJ_P0057176 Bcl2l11 protein_coding protein_coding MGP_CBAJ_T0057177.1 MGP_CBAJ_G0026170.1 mouse_genomes_project 2 140581986 140617154 + MGP_CBAJ_P0057177 Bcl2l11 protein_coding protein_coding MGP_CBAJ_T0057178.1 MGP_CBAJ_G0026170.1 mouse_genomes_project 2 140583508 140586095 + Bcl2l11 protein_coding processed_transcript MGP_CBAJ_T0057179.1 MGP_CBAJ_G0026170.1 mouse_genomes_project 2 140584064 140584672 + Bcl2l11 protein_coding processed_transcript MGP_CBAJ_T0003954.1 MGP_CBAJ_G0003514.1 mouse_genomes_project 2 90107182 90107642 - Gm13686 antisense antisense MGP_CBAJ_T0058083.1 MGP_CBAJ_G0026405.1 mouse_genomes_project 2 169506374 169512218 + MGP_CBAJ_P0058083 Bpifa5 protein_coding protein_coding MGP_CBAJ_T0055500.1 MGP_CBAJ_G0025763.1 mouse_genomes_project 2 95939448 95940369 + MGP_CBAJ_P0055500 Olfr1189 protein_coding protein_coding MGP_CBAJ_T0010246.1 MGP_CBAJ_G0008384.1 mouse_genomes_project 2 8398876 8399003 + Mir669i miRNA miRNA MGP_CBAJ_T0054477.1 MGP_CBAJ_G0025460.1 mouse_genomes_project 2 61771447 61862452 - MGP_CBAJ_P0054477 Acvr1c protein_coding protein_coding MGP_CBAJ_T0054478.1 MGP_CBAJ_G0025460.1 mouse_genomes_project 2 61771447 61862452 - MGP_CBAJ_P0054478 Acvr1c protein_coding protein_coding MGP_CBAJ_T0054479.1 MGP_CBAJ_G0025460.1 mouse_genomes_project 2 61771630 61862380 - MGP_CBAJ_P0054479 Acvr1c protein_coding protein_coding MGP_CBAJ_T0054480.1 MGP_CBAJ_G0025460.1 mouse_genomes_project 2 61796170 61832633 - MGP_CBAJ_P0054480 Acvr1c protein_coding protein_coding MGP_CBAJ_T0003964.1 MGP_CBAJ_G0003521.1 mouse_genomes_project 2 111163861 111167438 + Gm13920 antisense antisense MGP_CBAJ_T0003879.1 MGP_CBAJ_G0003462.1 mouse_genomes_project 2 34191967 34194373 + Gm13536 antisense antisense MGP_CBAJ_T0007101.1 MGP_CBAJ_G0005818.1 mouse_genomes_project 2 54145555 54164001 - 1700057H21Rik lincRNA lincRNA MGP_CBAJ_T0007102.1 MGP_CBAJ_G0005818.1 mouse_genomes_project 2 54145621 54163154 - 1700057H21Rik lincRNA lincRNA MGP_CBAJ_T0058285.1 MGP_CBAJ_G0026447.1 mouse_genomes_project 2 171597965 171608077 + MGP_CBAJ_P0058285 Ergic3 protein_coding protein_coding MGP_CBAJ_T0058286.1 MGP_CBAJ_G0026447.1 mouse_genomes_project 2 171598026 171608077 + MGP_CBAJ_P0058286 Ergic3 protein_coding protein_coding MGP_CBAJ_T0058287.1 MGP_CBAJ_G0026447.1 mouse_genomes_project 2 171598143 171601143 + Ergic3 protein_coding retained_intron MGP_CBAJ_T0058288.1 MGP_CBAJ_G0026447.1 mouse_genomes_project 2 171598539 171607436 + MGP_CBAJ_P0058288 Ergic3 protein_coding protein_coding MGP_CBAJ_T0058289.1 MGP_CBAJ_G0026447.1 mouse_genomes_project 2 171600358 171607885 + MGP_CBAJ_P0058289 Ergic3 protein_coding protein_coding MGP_CBAJ_T0058290.1 MGP_CBAJ_G0026447.1 mouse_genomes_project 2 171606306 171607948 + Ergic3 protein_coding processed_transcript MGP_CBAJ_T0058291.1 MGP_CBAJ_G0026447.1 mouse_genomes_project 2 171607012 171607894 + Ergic3 protein_coding processed_transcript MGP_CBAJ_T0058292.1 MGP_CBAJ_G0026447.1 mouse_genomes_project 2 171607291 171608077 + Ergic3 protein_coding retained_intron MGP_CBAJ_T0058293.1 MGP_CBAJ_G0026447.1 mouse_genomes_project 2 171607343 171608077 + Ergic3 protein_coding retained_intron MGP_CBAJ_T0058294.1 MGP_CBAJ_G0026447.1 mouse_genomes_project 2 171607445 171608075 + Ergic3 protein_coding retained_intron MGP_CBAJ_T0013329.1 MGP_CBAJ_G0011441.1 mouse_genomes_project 2 40923389 40923981 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004116.1 MGP_CBAJ_G0003630.1 mouse_genomes_project 2 199934895 199953083 + Gm14341 antisense antisense MGP_CBAJ_T0053232.1 MGP_CBAJ_G0025245.1 mouse_genomes_project 2 28770686 28777786 + Ddx31 protein_coding processed_transcript MGP_CBAJ_T0053233.1 MGP_CBAJ_G0025245.1 mouse_genomes_project 2 28770739 28835711 + MGP_CBAJ_P0053233 Ddx31 protein_coding protein_coding MGP_CBAJ_T0053234.1 MGP_CBAJ_G0025245.1 mouse_genomes_project 2 28775176 28786502 + Ddx31 protein_coding processed_transcript MGP_CBAJ_T0053235.1 MGP_CBAJ_G0025245.1 mouse_genomes_project 2 28787411 28790348 + Ddx31 protein_coding processed_transcript MGP_CBAJ_T0059134.1 MGP_CBAJ_G0026628.1 mouse_genomes_project 2 187948198 187970752 - MGP_CBAJ_P0059134 Zfp217 protein_coding protein_coding MGP_CBAJ_T0059135.1 MGP_CBAJ_G0026628.1 mouse_genomes_project 2 187948201 187982345 - MGP_CBAJ_P0059135 Zfp217 protein_coding protein_coding MGP_CBAJ_T0059136.1 MGP_CBAJ_G0026628.1 mouse_genomes_project 2 187959887 187970752 - Zfp217 protein_coding processed_transcript MGP_CBAJ_T0059137.1 MGP_CBAJ_G0026628.1 mouse_genomes_project 2 187960173 187973488 - Zfp217 protein_coding processed_transcript MGP_CBAJ_T0059138.1 MGP_CBAJ_G0026628.1 mouse_genomes_project 2 187960273 187987752 - Zfp217 protein_coding processed_transcript MGP_CBAJ_T0057862.1 MGP_CBAJ_G0026336.1 mouse_genomes_project 2 166460871 166480081 + MGP_CBAJ_P0057862 Fkbp1a protein_coding protein_coding MGP_CBAJ_T0057863.1 MGP_CBAJ_G0026336.1 mouse_genomes_project 2 166460973 166479217 + Fkbp1a protein_coding processed_transcript MGP_CBAJ_T0057864.1 MGP_CBAJ_G0026336.1 mouse_genomes_project 2 166460982 166478009 + Fkbp1a protein_coding processed_transcript MGP_CBAJ_T0057865.1 MGP_CBAJ_G0026336.1 mouse_genomes_project 2 166460982 166463066 + Fkbp1a protein_coding retained_intron MGP_CBAJ_T0057866.1 MGP_CBAJ_G0026336.1 mouse_genomes_project 2 166461003 166478217 + Fkbp1a protein_coding retained_intron MGP_CBAJ_T0057867.1 MGP_CBAJ_G0026336.1 mouse_genomes_project 2 166461009 166479331 + Fkbp1a protein_coding processed_transcript MGP_CBAJ_T0057868.1 MGP_CBAJ_G0026336.1 mouse_genomes_project 2 166461084 166475864 + Fkbp1a protein_coding processed_transcript MGP_CBAJ_T0057869.1 MGP_CBAJ_G0026336.1 mouse_genomes_project 2 166461125 166479042 + Fkbp1a protein_coding processed_transcript MGP_CBAJ_T0057870.1 MGP_CBAJ_G0026336.1 mouse_genomes_project 2 166462287 166480079 + MGP_CBAJ_P0057870 Fkbp1a protein_coding protein_coding MGP_CBAJ_T0057871.1 MGP_CBAJ_G0026336.1 mouse_genomes_project 2 166463798 166479102 + Fkbp1a protein_coding processed_transcript MGP_CBAJ_T0058715.1 MGP_CBAJ_G0026526.1 mouse_genomes_project 2 180430702 180495947 - MGP_CBAJ_P0058715 Rims4 protein_coding protein_coding MGP_CBAJ_T0007202.1 MGP_CBAJ_G0005900.1 mouse_genomes_project 2 127795407 127810149 + D330050G23Rik lincRNA lincRNA MGP_CBAJ_T0007203.1 MGP_CBAJ_G0005900.1 mouse_genomes_project 2 127795430 127809984 + D330050G23Rik lincRNA lincRNA MGP_CBAJ_T0007204.1 MGP_CBAJ_G0005900.1 mouse_genomes_project 2 127795449 127799224 + D330050G23Rik lincRNA lincRNA MGP_CBAJ_T0007120.1 MGP_CBAJ_G0005835.1 mouse_genomes_project 2 76779839 76781927 - Gm17250 lincRNA lincRNA MGP_CBAJ_T0058072.1 MGP_CBAJ_G0026401.1 mouse_genomes_project 2 169309667 169335335 + MGP_CBAJ_P0058072 Bpifa6 protein_coding protein_coding MGP_CBAJ_T0055572.1 MGP_CBAJ_G0025816.1 mouse_genomes_project 2 97612923 97616114 + MGP_CBAJ_P0055572 Olfr1261 protein_coding protein_coding MGP_CBAJ_T0057447.1 MGP_CBAJ_G0026231.1 mouse_genomes_project 2 144417966 144434435 - MGP_CBAJ_P0057447 Adra1d protein_coding protein_coding MGP_CBAJ_T0013452.1 MGP_CBAJ_G0011564.1 mouse_genomes_project 2 88827931 88828522 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013613.1 MGP_CBAJ_G0011725.1 mouse_genomes_project 2 158913742 158915996 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013351.1 MGP_CBAJ_G0011463.1 mouse_genomes_project 2 53163657 53163836 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057780.1 MGP_CBAJ_G0026311.1 mouse_genomes_project 2 163338982 163344062 + MGP_CBAJ_P0057780 Cstl1 protein_coding protein_coding MGP_CBAJ_T0057781.1 MGP_CBAJ_G0026311.1 mouse_genomes_project 2 163338985 163344007 + MGP_CBAJ_P0057781 Cstl1 protein_coding protein_coding MGP_CBAJ_T0057782.1 MGP_CBAJ_G0026311.1 mouse_genomes_project 2 163339020 163344007 + MGP_CBAJ_P0057782 Cstl1 protein_coding protein_coding MGP_CBAJ_T0011382.1 MGP_CBAJ_G0009520.1 mouse_genomes_project 2 124824769 124825087 + Gm25103 misc_RNA misc_RNA MGP_CBAJ_T0053779.1 MGP_CBAJ_G0025322.1 mouse_genomes_project 2 33203273 33205995 + MGP_CBAJ_P0053779 Dpm2 protein_coding protein_coding MGP_CBAJ_T0053780.1 MGP_CBAJ_G0025322.1 mouse_genomes_project 2 33203273 33205979 + MGP_CBAJ_P0053780 Dpm2 protein_coding protein_coding MGP_CBAJ_T0053781.1 MGP_CBAJ_G0025322.1 mouse_genomes_project 2 33203282 33205497 + Dpm2 protein_coding retained_intron MGP_CBAJ_T0053782.1 MGP_CBAJ_G0025322.1 mouse_genomes_project 2 33204462 33205872 + Dpm2 protein_coding retained_intron MGP_CBAJ_T0011390.1 MGP_CBAJ_G0009528.1 mouse_genomes_project 2 161708269 161708727 + Nkx2-2os misc_RNA misc_RNA MGP_CBAJ_T0100381.1 MGP_CBAJ_G0038636.1 mouse_genomes_project 2 105758317 105758446 + Gm22313 snoRNA snoRNA MGP_CBAJ_T0058429.1 MGP_CBAJ_G0026464.1 mouse_genomes_project 2 172591413 172601849 + MGP_CBAJ_P0058429 1110008F13Rik protein_coding protein_coding MGP_CBAJ_T0058430.1 MGP_CBAJ_G0026464.1 mouse_genomes_project 2 172591424 172601684 + 1110008F13Rik protein_coding processed_transcript MGP_CBAJ_T0058431.1 MGP_CBAJ_G0026464.1 mouse_genomes_project 2 172591430 172595273 + 1110008F13Rik protein_coding retained_intron MGP_CBAJ_T0058433.1 MGP_CBAJ_G0026464.1 mouse_genomes_project 2 172600827 172601682 + 1110008F13Rik protein_coding processed_transcript MGP_CBAJ_T0101087.1 MGP_CBAJ_G0039297.1 mouse_genomes_project 2 143572463 143572945 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0059543.1 MGP_CBAJ_G0026722.1 mouse_genomes_project 2 200635524 200646228 - MGP_CBAJ_P0059543 Zfp512b protein_coding protein_coding MGP_CBAJ_T0059544.1 MGP_CBAJ_G0026722.1 mouse_genomes_project 2 200635526 200644345 - MGP_CBAJ_P0059544 Zfp512b protein_coding protein_coding MGP_CBAJ_T0059545.1 MGP_CBAJ_G0026722.1 mouse_genomes_project 2 200638011 200639825 - Zfp512b protein_coding retained_intron MGP_CBAJ_T0059546.1 MGP_CBAJ_G0026722.1 mouse_genomes_project 2 200638599 200639731 - MGP_CBAJ_P0059546 Zfp512b protein_coding protein_coding MGP_CBAJ_T0059547.1 MGP_CBAJ_G0026722.1 mouse_genomes_project 2 200638605 200639783 - MGP_CBAJ_P0059547 Zfp512b protein_coding protein_coding MGP_CBAJ_T0059548.1 MGP_CBAJ_G0026722.1 mouse_genomes_project 2 200640142 200641052 - Zfp512b protein_coding retained_intron MGP_CBAJ_T0059549.1 MGP_CBAJ_G0026722.1 mouse_genomes_project 2 200640538 200642165 - MGP_CBAJ_P0059549 Zfp512b protein_coding nonsense_mediated_decay MGP_CBAJ_T0059550.1 MGP_CBAJ_G0026722.1 mouse_genomes_project 2 200641491 200642712 - Zfp512b protein_coding processed_transcript MGP_CBAJ_T0059551.1 MGP_CBAJ_G0026722.1 mouse_genomes_project 2 200643448 200646183 - Zfp512b protein_coding processed_transcript MGP_CBAJ_T0059552.1 MGP_CBAJ_G0026722.1 mouse_genomes_project 2 200643947 200646228 - MGP_CBAJ_P0059552 Zfp512b protein_coding protein_coding MGP_CBAJ_T0017521.1 MGP_CBAJ_G0015162.1 mouse_genomes_project 2 60551141 60554942 + processed_transcript processed_transcript MGP_CBAJ_T0055974.1 MGP_CBAJ_G0025886.1 mouse_genomes_project 2 104734518 106191253 + MGP_CBAJ_P0055974 Lrrc4c protein_coding protein_coding MGP_CBAJ_T0055975.1 MGP_CBAJ_G0025886.1 mouse_genomes_project 2 104734565 106190570 + MGP_CBAJ_P0055975 Lrrc4c protein_coding protein_coding MGP_CBAJ_T0055976.1 MGP_CBAJ_G0025886.1 mouse_genomes_project 2 105998483 106191251 + MGP_CBAJ_P0055976 Lrrc4c protein_coding protein_coding MGP_CBAJ_T0000997.1 MGP_CBAJ_G0000929.1 mouse_genomes_project 2 9558426 9560529 - TEC TEC MGP_CBAJ_T0013410.1 MGP_CBAJ_G0011522.1 mouse_genomes_project 2 74556315 74556874 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013482.1 MGP_CBAJ_G0011594.1 mouse_genomes_project 2 99199283 99199451 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057106.1 MGP_CBAJ_G0026152.1 mouse_genomes_project 2 139603230 139610092 - MGP_CBAJ_P0057106 Ciao1 protein_coding protein_coding MGP_CBAJ_T0057107.1 MGP_CBAJ_G0026152.1 mouse_genomes_project 2 139604910 139609896 - MGP_CBAJ_P0057107 Ciao1 protein_coding protein_coding MGP_CBAJ_T0057108.1 MGP_CBAJ_G0026152.1 mouse_genomes_project 2 139605165 139608322 - Ciao1 protein_coding retained_intron MGP_CBAJ_T0057109.1 MGP_CBAJ_G0026152.1 mouse_genomes_project 2 139605292 139609896 - MGP_CBAJ_P0057109 Ciao1 protein_coding protein_coding MGP_CBAJ_T0057110.1 MGP_CBAJ_G0026152.1 mouse_genomes_project 2 139608131 139609896 - MGP_CBAJ_P0057110 Ciao1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054137.1 MGP_CBAJ_G0025392.1 mouse_genomes_project 2 37990917 37991871 + MGP_CBAJ_P0054137 Olfr354 protein_coding protein_coding MGP_CBAJ_T0059201.1 MGP_CBAJ_G0026652.1 mouse_genomes_project 2 191900371 191907574 + MGP_CBAJ_P0059201 1700021F07Rik protein_coding protein_coding MGP_CBAJ_T0013634.1 MGP_CBAJ_G0011746.1 mouse_genomes_project 2 165788203 165788560 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0053142.1 MGP_CBAJ_G0025226.1 mouse_genomes_project 2 27206607 27236408 - MGP_CBAJ_P0053142 Brd3 protein_coding protein_coding MGP_CBAJ_T0053143.1 MGP_CBAJ_G0025226.1 mouse_genomes_project 2 27206607 27236696 - MGP_CBAJ_P0053143 Brd3 protein_coding protein_coding MGP_CBAJ_T0053144.1 MGP_CBAJ_G0025226.1 mouse_genomes_project 2 27206628 27236683 - MGP_CBAJ_P0053144 Brd3 protein_coding protein_coding MGP_CBAJ_T0053145.1 MGP_CBAJ_G0025226.1 mouse_genomes_project 2 27208871 27225126 - MGP_CBAJ_P0053145 Brd3 protein_coding protein_coding MGP_CBAJ_T0053146.1 MGP_CBAJ_G0025226.1 mouse_genomes_project 2 27210277 27272179 - MGP_CBAJ_P0053146 Brd3 protein_coding protein_coding MGP_CBAJ_T0053147.1 MGP_CBAJ_G0025226.1 mouse_genomes_project 2 27210277 27236664 - MGP_CBAJ_P0053147 Brd3 protein_coding protein_coding MGP_CBAJ_T0053148.1 MGP_CBAJ_G0025226.1 mouse_genomes_project 2 27214005 27236663 - Brd3 protein_coding processed_transcript MGP_CBAJ_T0053149.1 MGP_CBAJ_G0025226.1 mouse_genomes_project 2 27224540 27236617 - MGP_CBAJ_P0053149 Brd3 protein_coding protein_coding MGP_CBAJ_T0053150.1 MGP_CBAJ_G0025226.1 mouse_genomes_project 2 27224901 27225592 - Brd3 protein_coding processed_transcript MGP_CBAJ_T0053151.1 MGP_CBAJ_G0025226.1 mouse_genomes_project 2 27225008 27236191 - Brd3 protein_coding processed_transcript MGP_CBAJ_T0013647.1 MGP_CBAJ_G0011759.1 mouse_genomes_project 2 170693483 170694112 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0058791.1 MGP_CBAJ_G0026556.1 mouse_genomes_project 2 181360639 181377021 + MGP_CBAJ_P0058791 Wfdc6b protein_coding protein_coding MGP_CBAJ_T0057382.1 MGP_CBAJ_G0026219.1 mouse_genomes_project 2 143870427 143890737 - MGP_CBAJ_P0057382 Siglec1 protein_coding protein_coding MGP_CBAJ_T0057383.1 MGP_CBAJ_G0026219.1 mouse_genomes_project 2 143873261 143890737 - MGP_CBAJ_P0057383 Siglec1 protein_coding protein_coding MGP_CBAJ_T0057384.1 MGP_CBAJ_G0026219.1 mouse_genomes_project 2 143887544 143890737 - MGP_CBAJ_P0057384 Siglec1 protein_coding protein_coding MGP_CBAJ_T0003828.1 MGP_CBAJ_G0003422.1 mouse_genomes_project 2 13173806 13202725 - Gm13269 antisense antisense MGP_CBAJ_T0003829.1 MGP_CBAJ_G0003422.1 mouse_genomes_project 2 13173806 13199190 - Gm13269 antisense antisense MGP_CBAJ_T0055032.1 MGP_CBAJ_G0025560.1 mouse_genomes_project 2 80049033 80056500 + Hoxd11 protein_coding processed_transcript MGP_CBAJ_T0055033.1 MGP_CBAJ_G0025560.1 mouse_genomes_project 2 80051804 80053654 + MGP_CBAJ_P0055033 Hoxd11 protein_coding protein_coding MGP_CBAJ_T0001044.1 MGP_CBAJ_G0000976.1 mouse_genomes_project 2 41096553 41100175 + TEC TEC MGP_CBAJ_T0004056.1 MGP_CBAJ_G0003585.1 mouse_genomes_project 2 168930074 168931671 - Dnmt3bos antisense antisense MGP_CBAJ_T0013233.1 MGP_CBAJ_G0011345.1 mouse_genomes_project 2 2143126 2143351 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0056035.1 MGP_CBAJ_G0025899.1 mouse_genomes_project 2 112225514 112279875 - MGP_CBAJ_P0056035 Pdhx protein_coding protein_coding MGP_CBAJ_T0056036.1 MGP_CBAJ_G0025899.1 mouse_genomes_project 2 112237719 112279697 - MGP_CBAJ_P0056036 Pdhx protein_coding protein_coding MGP_CBAJ_T0056037.1 MGP_CBAJ_G0025899.1 mouse_genomes_project 2 112245282 112279824 - MGP_CBAJ_P0056037 Pdhx protein_coding protein_coding MGP_CBAJ_T0007097.1 MGP_CBAJ_G0005814.1 mouse_genomes_project 2 53193575 53197920 + Gm13485 lincRNA lincRNA MGP_CBAJ_T0099088.1 MGP_CBAJ_G0037343.1 mouse_genomes_project 2 9044187 9044320 - Gm26478 snRNA snRNA MGP_CBAJ_T0052788.1 MGP_CBAJ_G0025160.1 mouse_genomes_project 2 24925247 24927086 + Clic3 protein_coding processed_transcript MGP_CBAJ_T0052789.1 MGP_CBAJ_G0025160.1 mouse_genomes_project 2 24925247 24927186 + MGP_CBAJ_P0052789 Clic3 protein_coding protein_coding MGP_CBAJ_T0052790.1 MGP_CBAJ_G0025160.1 mouse_genomes_project 2 24925258 24927186 + MGP_CBAJ_P0052790 Clic3 protein_coding protein_coding MGP_CBAJ_T0052791.1 MGP_CBAJ_G0025160.1 mouse_genomes_project 2 24925300 24927186 + Clic3 protein_coding processed_transcript MGP_CBAJ_T0052792.1 MGP_CBAJ_G0025160.1 mouse_genomes_project 2 24925306 24927093 + Clic3 protein_coding processed_transcript MGP_CBAJ_T0052793.1 MGP_CBAJ_G0025160.1 mouse_genomes_project 2 24926045 24926625 + Clic3 protein_coding processed_transcript MGP_CBAJ_T0013433.1 MGP_CBAJ_G0011545.1 mouse_genomes_project 2 82958297 82961457 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013289.1 MGP_CBAJ_G0011401.1 mouse_genomes_project 2 24013238 24013884 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0053941.1 MGP_CBAJ_G0025349.1 mouse_genomes_project 2 35007056 35242122 - MGP_CBAJ_P0053941 Pbx3 protein_coding protein_coding MGP_CBAJ_T0053942.1 MGP_CBAJ_G0025349.1 mouse_genomes_project 2 35008471 35142839 - Pbx3 protein_coding processed_transcript MGP_CBAJ_T0053943.1 MGP_CBAJ_G0025349.1 mouse_genomes_project 2 35008479 35242122 - MGP_CBAJ_P0053943 Pbx3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053944.1 MGP_CBAJ_G0025349.1 mouse_genomes_project 2 35008479 35242122 - MGP_CBAJ_P0053944 Pbx3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053945.1 MGP_CBAJ_G0025349.1 mouse_genomes_project 2 35012457 35241048 - MGP_CBAJ_P0053945 Pbx3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053946.1 MGP_CBAJ_G0025349.1 mouse_genomes_project 2 35057206 35243252 - MGP_CBAJ_P0053946 Pbx3 protein_coding protein_coding MGP_CBAJ_T0053947.1 MGP_CBAJ_G0025349.1 mouse_genomes_project 2 35068230 35241455 - MGP_CBAJ_P0053947 Pbx3 protein_coding protein_coding MGP_CBAJ_T0053948.1 MGP_CBAJ_G0025349.1 mouse_genomes_project 2 35068357 35241352 - MGP_CBAJ_P0053948 Pbx3 protein_coding protein_coding MGP_CBAJ_T0053949.1 MGP_CBAJ_G0025349.1 mouse_genomes_project 2 35238313 35241994 - Pbx3 protein_coding retained_intron MGP_CBAJ_T0056499.1 MGP_CBAJ_G0026030.1 mouse_genomes_project 2 130345644 130392436 - MGP_CBAJ_P0056499 Dnajc17 protein_coding protein_coding MGP_CBAJ_T0056501.1 MGP_CBAJ_G0026030.1 mouse_genomes_project 2 130352567 130356800 - Dnajc17 protein_coding processed_transcript MGP_CBAJ_T0056502.1 MGP_CBAJ_G0026030.1 mouse_genomes_project 2 130356837 130392423 - Dnajc17 protein_coding retained_intron MGP_CBAJ_T0057640.1 MGP_CBAJ_G0026278.1 mouse_genomes_project 2 158007691 158012577 - Rrbp1 protein_coding processed_transcript MGP_CBAJ_T0057641.1 MGP_CBAJ_G0026278.1 mouse_genomes_project 2 158007691 158073666 - MGP_CBAJ_P0057641 Rrbp1 protein_coding protein_coding MGP_CBAJ_T0057642.1 MGP_CBAJ_G0026278.1 mouse_genomes_project 2 158008424 158010033 - Rrbp1 protein_coding processed_transcript MGP_CBAJ_T0057643.1 MGP_CBAJ_G0026278.1 mouse_genomes_project 2 158010788 158015478 - Rrbp1 protein_coding processed_transcript MGP_CBAJ_T0057644.1 MGP_CBAJ_G0026278.1 mouse_genomes_project 2 158016678 158017941 - Rrbp1 protein_coding processed_transcript MGP_CBAJ_T0057645.1 MGP_CBAJ_G0026278.1 mouse_genomes_project 2 158021915 158028803 - Rrbp1 protein_coding processed_transcript MGP_CBAJ_T0057646.1 MGP_CBAJ_G0026278.1 mouse_genomes_project 2 158026048 158044438 - Rrbp1 protein_coding processed_transcript MGP_CBAJ_T0057647.1 MGP_CBAJ_G0026278.1 mouse_genomes_project 2 158047125 158073666 - MGP_CBAJ_P0057647 Rrbp1 protein_coding protein_coding MGP_CBAJ_T0101416.1 MGP_CBAJ_G0039466.1 mouse_genomes_project 2 115593900 115638041 + unitary_pseudogene processed_transcript MGP_CBAJ_T0101417.1 MGP_CBAJ_G0039466.1 mouse_genomes_project 2 115633513 116038929 + unitary_pseudogene unitary_pseudogene MGP_CBAJ_T0101418.1 MGP_CBAJ_G0039466.1 mouse_genomes_project 2 115845564 116038929 + unitary_pseudogene processed_transcript MGP_CBAJ_T0101419.1 MGP_CBAJ_G0039466.1 mouse_genomes_project 2 115849930 115976111 + unitary_pseudogene processed_transcript MGP_CBAJ_T0101420.1 MGP_CBAJ_G0039466.1 mouse_genomes_project 2 116036992 116057496 + unitary_pseudogene retained_intron MGP_CBAJ_T0056350.1 MGP_CBAJ_G0025998.1 mouse_genomes_project 2 124653986 124729067 - MGP_CBAJ_P0056350 Aqr protein_coding protein_coding MGP_CBAJ_T0056351.1 MGP_CBAJ_G0025998.1 mouse_genomes_project 2 124657978 124729005 - MGP_CBAJ_P0056351 Aqr protein_coding protein_coding MGP_CBAJ_T0056352.1 MGP_CBAJ_G0025998.1 mouse_genomes_project 2 124664937 124671999 - Aqr protein_coding processed_transcript MGP_CBAJ_T0056353.1 MGP_CBAJ_G0025998.1 mouse_genomes_project 2 124685797 124693949 - Aqr protein_coding processed_transcript MGP_CBAJ_T0056354.1 MGP_CBAJ_G0025998.1 mouse_genomes_project 2 124686178 124728974 - Aqr protein_coding processed_transcript MGP_CBAJ_T0056355.1 MGP_CBAJ_G0025998.1 mouse_genomes_project 2 124705509 124729066 - Aqr protein_coding processed_transcript MGP_CBAJ_T0056356.1 MGP_CBAJ_G0025998.1 mouse_genomes_project 2 124711282 124729066 - Aqr protein_coding processed_transcript MGP_CBAJ_T0056357.1 MGP_CBAJ_G0025998.1 mouse_genomes_project 2 124722714 124729144 - Aqr protein_coding processed_transcript MGP_CBAJ_T0017537.1 MGP_CBAJ_G0015175.1 mouse_genomes_project 2 90147072 90175757 - Gm13684 processed_transcript processed_transcript MGP_CBAJ_T0056909.1 MGP_CBAJ_G0026103.1 mouse_genomes_project 2 133720412 133793555 - MGP_CBAJ_P0056909 Patl2 protein_coding protein_coding MGP_CBAJ_T0099105.1 MGP_CBAJ_G0037360.1 mouse_genomes_project 2 56264737 56264843 - Gm25898 snRNA snRNA MGP_CBAJ_T0053121.1 MGP_CBAJ_G0025222.1 mouse_genomes_project 2 26833327 26870436 - MGP_CBAJ_P0053121 Fam163b protein_coding protein_coding MGP_CBAJ_T0053638.1 MGP_CBAJ_G0025303.1 mouse_genomes_project 2 32266291 32303146 - MGP_CBAJ_P0053638 Fibcd1 protein_coding protein_coding MGP_CBAJ_T0099120.1 MGP_CBAJ_G0037375.1 mouse_genomes_project 2 123780370 123780536 + Gm26505 snRNA snRNA MGP_CBAJ_T0007041.1 MGP_CBAJ_G0005772.1 mouse_genomes_project 2 9378741 9380809 + Gm13291 lincRNA lincRNA MGP_CBAJ_T0010353.1 MGP_CBAJ_G0008491.1 mouse_genomes_project 2 179577860 179577926 + Mir7003 miRNA miRNA MGP_CBAJ_T0059248.1 MGP_CBAJ_G0026663.1 mouse_genomes_project 2 192933680 192943381 + MGP_CBAJ_P0059248 Tubb1 protein_coding protein_coding MGP_CBAJ_T0013367.1 MGP_CBAJ_G0011479.1 mouse_genomes_project 2 57472737 57473288 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0056537.1 MGP_CBAJ_G0026042.1 mouse_genomes_project 2 130851762 130862506 - Oip5 protein_coding retained_intron MGP_CBAJ_T0056538.1 MGP_CBAJ_G0026042.1 mouse_genomes_project 2 130852207 130862506 - MGP_CBAJ_P0056538 Oip5 protein_coding protein_coding MGP_CBAJ_T0007208.1 MGP_CBAJ_G0005904.1 mouse_genomes_project 2 128845078 128851223 - Gm13985 lincRNA lincRNA MGP_CBAJ_T0004091.1 MGP_CBAJ_G0003611.1 mouse_genomes_project 2 182355396 182363530 + Gm14437 antisense antisense MGP_CBAJ_T0055337.1 MGP_CBAJ_G0025631.1 mouse_genomes_project 2 91555033 91565405 + MGP_CBAJ_P0055337 Ssrp1 protein_coding protein_coding MGP_CBAJ_T0055338.1 MGP_CBAJ_G0025631.1 mouse_genomes_project 2 91555250 91565402 + MGP_CBAJ_P0055338 Ssrp1 protein_coding protein_coding MGP_CBAJ_T0055339.1 MGP_CBAJ_G0025631.1 mouse_genomes_project 2 91555252 91557556 + Ssrp1 protein_coding processed_transcript MGP_CBAJ_T0055340.1 MGP_CBAJ_G0025631.1 mouse_genomes_project 2 91555254 91564068 + MGP_CBAJ_P0055340 Ssrp1 protein_coding protein_coding MGP_CBAJ_T0055341.1 MGP_CBAJ_G0025631.1 mouse_genomes_project 2 91555332 91558740 + Ssrp1 protein_coding processed_transcript MGP_CBAJ_T0055342.1 MGP_CBAJ_G0025631.1 mouse_genomes_project 2 91558396 91559307 + Ssrp1 protein_coding processed_transcript MGP_CBAJ_T0055343.1 MGP_CBAJ_G0025631.1 mouse_genomes_project 2 91559458 91560594 + Ssrp1 protein_coding processed_transcript MGP_CBAJ_T0055344.1 MGP_CBAJ_G0025631.1 mouse_genomes_project 2 91563546 91565014 + Ssrp1 protein_coding processed_transcript MGP_CBAJ_T0055345.1 MGP_CBAJ_G0025631.1 mouse_genomes_project 2 91563650 91564581 + Ssrp1 protein_coding processed_transcript MGP_CBAJ_T0055526.1 MGP_CBAJ_G0025786.1 mouse_genomes_project 2 96694383 96695319 - MGP_CBAJ_P0055526 Olfr1225 protein_coding protein_coding MGP_CBAJ_T0056295.1 MGP_CBAJ_G0025977.1 mouse_genomes_project 2 122377957 122378911 - MGP_CBAJ_P0056295 Olfr1312 protein_coding protein_coding MGP_CBAJ_T0055547.1 MGP_CBAJ_G0025801.1 mouse_genomes_project 2 97128279 97129203 - MGP_CBAJ_P0055547 Olfr1245 protein_coding protein_coding MGP_CBAJ_T0055883.1 MGP_CBAJ_G0025871.1 mouse_genomes_project 2 101061090 101146037 - MGP_CBAJ_P0055883 Prdm11 protein_coding protein_coding MGP_CBAJ_T0055884.1 MGP_CBAJ_G0025871.1 mouse_genomes_project 2 101071514 101146610 - MGP_CBAJ_P0055884 Prdm11 protein_coding protein_coding MGP_CBAJ_T0055885.1 MGP_CBAJ_G0025871.1 mouse_genomes_project 2 101082853 101110277 - MGP_CBAJ_P0055885 Prdm11 protein_coding protein_coding MGP_CBAJ_T0055886.1 MGP_CBAJ_G0025871.1 mouse_genomes_project 2 101106530 101110304 - Prdm11 protein_coding processed_transcript MGP_CBAJ_T0055887.1 MGP_CBAJ_G0025871.1 mouse_genomes_project 2 101109020 101146633 - MGP_CBAJ_P0055887 Prdm11 protein_coding protein_coding MGP_CBAJ_T0054174.1 MGP_CBAJ_G0025409.1 mouse_genomes_project 2 38614966 38792517 - MGP_CBAJ_P0054174 Strbp protein_coding nonsense_mediated_decay MGP_CBAJ_T0054180.1 MGP_CBAJ_G0025409.1 mouse_genomes_project 2 38704499 38792583 - MGP_CBAJ_P0054180 Strbp protein_coding protein_coding MGP_CBAJ_T0054181.1 MGP_CBAJ_G0025409.1 mouse_genomes_project 2 38704652 38728487 - Strbp protein_coding processed_transcript MGP_CBAJ_T0054182.1 MGP_CBAJ_G0025409.1 mouse_genomes_project 2 38714234 38721204 - MGP_CBAJ_P0054182 Strbp protein_coding nonsense_mediated_decay MGP_CBAJ_T0054183.1 MGP_CBAJ_G0025409.1 mouse_genomes_project 2 38717851 38862526 - MGP_CBAJ_P0054183 Strbp protein_coding protein_coding MGP_CBAJ_T0054184.1 MGP_CBAJ_G0025409.1 mouse_genomes_project 2 38776609 38862599 - Strbp protein_coding processed_transcript MGP_CBAJ_T0054185.1 MGP_CBAJ_G0025409.1 mouse_genomes_project 2 38777138 38803149 - MGP_CBAJ_P0054185 Strbp protein_coding protein_coding MGP_CBAJ_T0054186.1 MGP_CBAJ_G0025409.1 mouse_genomes_project 2 38784676 38863110 - MGP_CBAJ_P0054186 Strbp protein_coding protein_coding MGP_CBAJ_T0054187.1 MGP_CBAJ_G0025409.1 mouse_genomes_project 2 38792417 38862400 - Strbp protein_coding processed_transcript MGP_CBAJ_T0013402.1 MGP_CBAJ_G0011514.1 mouse_genomes_project 2 70897248 70898180 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0058566.1 MGP_CBAJ_G0026492.1 mouse_genomes_project 2 174632496 174649745 + Actr5 protein_coding retained_intron MGP_CBAJ_T0058567.1 MGP_CBAJ_G0026492.1 mouse_genomes_project 2 174632496 174636766 + Actr5 protein_coding retained_intron MGP_CBAJ_T0058568.1 MGP_CBAJ_G0026492.1 mouse_genomes_project 2 174632496 174649745 + MGP_CBAJ_P0058568 Actr5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058569.1 MGP_CBAJ_G0026492.1 mouse_genomes_project 2 174632496 174649758 + MGP_CBAJ_P0058569 Actr5 protein_coding protein_coding MGP_CBAJ_T0058570.1 MGP_CBAJ_G0026492.1 mouse_genomes_project 2 174639237 174647244 + Actr5 protein_coding processed_transcript MGP_CBAJ_T0007081.1 MGP_CBAJ_G0005801.1 mouse_genomes_project 2 36173049 36174767 + Gm13605 lincRNA lincRNA MGP_CBAJ_T0013608.1 MGP_CBAJ_G0011720.1 mouse_genomes_project 2 157897894 157898322 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0053936.1 MGP_CBAJ_G0025348.1 mouse_genomes_project 2 34511182 34682904 - MGP_CBAJ_P0053936 Mvb12b protein_coding protein_coding MGP_CBAJ_T0053937.1 MGP_CBAJ_G0025348.1 mouse_genomes_project 2 34572042 34575491 - Mvb12b protein_coding retained_intron MGP_CBAJ_T0053938.1 MGP_CBAJ_G0025348.1 mouse_genomes_project 2 34573899 34681803 - Mvb12b protein_coding processed_transcript MGP_CBAJ_T0053939.1 MGP_CBAJ_G0025348.1 mouse_genomes_project 2 34611795 34681803 - MGP_CBAJ_P0053939 Mvb12b protein_coding protein_coding MGP_CBAJ_T0053940.1 MGP_CBAJ_G0025348.1 mouse_genomes_project 2 34662167 34682440 - Mvb12b protein_coding processed_transcript MGP_CBAJ_T0053774.1 MGP_CBAJ_G0025321.1 mouse_genomes_project 2 33159216 33202166 + Fam102a protein_coding retained_intron MGP_CBAJ_T0053775.1 MGP_CBAJ_G0025321.1 mouse_genomes_project 2 33159217 33160075 + MGP_CBAJ_P0053775 Fam102a protein_coding protein_coding MGP_CBAJ_T0053776.1 MGP_CBAJ_G0025321.1 mouse_genomes_project 2 33159243 33202172 + MGP_CBAJ_P0053776 Fam102a protein_coding protein_coding MGP_CBAJ_T0053777.1 MGP_CBAJ_G0025321.1 mouse_genomes_project 2 33159617 33182783 + MGP_CBAJ_P0053777 Fam102a protein_coding protein_coding MGP_CBAJ_T0053778.1 MGP_CBAJ_G0025321.1 mouse_genomes_project 2 33164074 33184821 + Fam102a protein_coding processed_transcript MGP_CBAJ_T0004070.1 MGP_CBAJ_G0003598.1 mouse_genomes_project 2 176983339 176991322 - Gm27206 antisense antisense MGP_CBAJ_T0100397.1 MGP_CBAJ_G0038652.1 mouse_genomes_project 2 142973959 142974029 + Gm23650 snoRNA snoRNA MGP_CBAJ_T0055516.1 MGP_CBAJ_G0025777.1 mouse_genomes_project 2 96455998 96456934 - MGP_CBAJ_P0055516 Olfr1214 protein_coding protein_coding MGP_CBAJ_T0058758.1 MGP_CBAJ_G0026545.1 mouse_genomes_project 2 181125311 181144535 - MGP_CBAJ_P0058758 Sdc4 protein_coding protein_coding MGP_CBAJ_T0058759.1 MGP_CBAJ_G0026545.1 mouse_genomes_project 2 181127100 181145236 - Sdc4 protein_coding processed_transcript MGP_CBAJ_T0013315.1 MGP_CBAJ_G0011427.1 mouse_genomes_project 2 38131799 38132208 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010298.1 MGP_CBAJ_G0008436.1 mouse_genomes_project 2 81144960 81145034 + Gm24574 miRNA miRNA MGP_CBAJ_T0010297.1 MGP_CBAJ_G0008435.1 mouse_genomes_project 2 80099747 80099815 + Mir10b miRNA miRNA MGP_CBAJ_T0003839.1 MGP_CBAJ_G0003432.1 mouse_genomes_project 2 20492131 20520698 - Gm13327 antisense antisense MGP_CBAJ_T0010361.1 MGP_CBAJ_G0008499.1 mouse_genomes_project 2 192099838 192099957 - Mir6340 miRNA miRNA MGP_CBAJ_T0057650.1 MGP_CBAJ_G0026280.1 mouse_genomes_project 2 158351271 158372331 - MGP_CBAJ_P0057650 Snx5 protein_coding protein_coding MGP_CBAJ_T0057651.1 MGP_CBAJ_G0026280.1 mouse_genomes_project 2 158351271 158371997 - MGP_CBAJ_P0057651 Snx5 protein_coding protein_coding MGP_CBAJ_T0057652.1 MGP_CBAJ_G0026280.1 mouse_genomes_project 2 158352212 158354880 - Snx5 protein_coding processed_transcript MGP_CBAJ_T0057653.1 MGP_CBAJ_G0026280.1 mouse_genomes_project 2 158352264 158353852 - Snx5 protein_coding processed_transcript MGP_CBAJ_T0057654.1 MGP_CBAJ_G0026280.1 mouse_genomes_project 2 158354899 158356680 - Snx5 protein_coding processed_transcript MGP_CBAJ_T0057655.1 MGP_CBAJ_G0026280.1 mouse_genomes_project 2 158355865 158356659 - Snx5 protein_coding processed_transcript MGP_CBAJ_T0057656.1 MGP_CBAJ_G0026280.1 mouse_genomes_project 2 158355968 158361981 - Snx5 protein_coding processed_transcript MGP_CBAJ_T0057657.1 MGP_CBAJ_G0026280.1 mouse_genomes_project 2 158370878 158372209 - Snx5 protein_coding processed_transcript MGP_CBAJ_T0055459.1 MGP_CBAJ_G0025726.1 mouse_genomes_project 2 94738358 94739417 - MGP_CBAJ_P0055459 protein_coding protein_coding MGP_CBAJ_T0001042.1 MGP_CBAJ_G0000974.1 mouse_genomes_project 2 40131488 40134851 + TEC TEC MGP_CBAJ_T0055320.1 MGP_CBAJ_G0025626.1 mouse_genomes_project 2 91372134 91389035 - MGP_CBAJ_P0055320 Rtn4rl2 protein_coding protein_coding MGP_CBAJ_T0055321.1 MGP_CBAJ_G0025626.1 mouse_genomes_project 2 91372156 91389017 - MGP_CBAJ_P0055321 Rtn4rl2 protein_coding protein_coding MGP_CBAJ_T0055322.1 MGP_CBAJ_G0025626.1 mouse_genomes_project 2 91380726 91388801 - Rtn4rl2 protein_coding processed_transcript MGP_CBAJ_T0053788.1 MGP_CBAJ_G0025325.1 mouse_genomes_project 2 33222690 33235294 + MGP_CBAJ_P0053788 St6galnac4 protein_coding protein_coding MGP_CBAJ_T0053789.1 MGP_CBAJ_G0025325.1 mouse_genomes_project 2 33222734 33229871 + St6galnac4 protein_coding retained_intron MGP_CBAJ_T0053790.1 MGP_CBAJ_G0025325.1 mouse_genomes_project 2 33223176 33233297 + St6galnac4 protein_coding retained_intron MGP_CBAJ_T0053791.1 MGP_CBAJ_G0025325.1 mouse_genomes_project 2 33223220 33234671 + MGP_CBAJ_P0053791 St6galnac4 protein_coding protein_coding MGP_CBAJ_T0053792.1 MGP_CBAJ_G0025325.1 mouse_genomes_project 2 33229871 33232785 + MGP_CBAJ_P0053792 St6galnac4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057997.1 MGP_CBAJ_G0026381.1 mouse_genomes_project 2 168177691 168202869 + MGP_CBAJ_P0057997 Xkr7 protein_coding protein_coding MGP_CBAJ_T0010250.1 MGP_CBAJ_G0008388.1 mouse_genomes_project 2 16267588 16267701 + Mir6419 miRNA miRNA MGP_CBAJ_T0055396.1 MGP_CBAJ_G0025672.1 mouse_genomes_project 2 92922314 92923277 - MGP_CBAJ_P0055396 Olfr1048 protein_coding protein_coding MGP_CBAJ_T0054580.1 MGP_CBAJ_G0025476.1 mouse_genomes_project 2 64484152 64720414 - MGP_CBAJ_P0054580 Rbms1 protein_coding protein_coding MGP_CBAJ_T0054581.1 MGP_CBAJ_G0025476.1 mouse_genomes_project 2 64488730 64629578 - MGP_CBAJ_P0054581 Rbms1 protein_coding protein_coding MGP_CBAJ_T0054582.1 MGP_CBAJ_G0025476.1 mouse_genomes_project 2 64489499 64629610 - MGP_CBAJ_P0054582 Rbms1 protein_coding protein_coding MGP_CBAJ_T0054583.1 MGP_CBAJ_G0025476.1 mouse_genomes_project 2 64490337 64499125 - Rbms1 protein_coding processed_transcript MGP_CBAJ_T0054584.1 MGP_CBAJ_G0025476.1 mouse_genomes_project 2 64492231 64520823 - Rbms1 protein_coding processed_transcript MGP_CBAJ_T0054585.1 MGP_CBAJ_G0025476.1 mouse_genomes_project 2 64589045 64636195 - Rbms1 protein_coding processed_transcript MGP_CBAJ_T0054586.1 MGP_CBAJ_G0025476.1 mouse_genomes_project 2 64589045 64637170 - Rbms1 protein_coding processed_transcript MGP_CBAJ_T0054587.1 MGP_CBAJ_G0025476.1 mouse_genomes_project 2 64636351 64636648 - Rbms1 protein_coding processed_transcript MGP_CBAJ_T0054588.1 MGP_CBAJ_G0025476.1 mouse_genomes_project 2 64636563 64637136 - Rbms1 protein_coding processed_transcript MGP_CBAJ_T0013344.1 MGP_CBAJ_G0011456.1 mouse_genomes_project 2 50752103 50752355 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0057769.1 MGP_CBAJ_G0026305.1 mouse_genomes_project 2 162949325 162950749 + MGP_CBAJ_P0057769 Sstr4 protein_coding protein_coding MGP_CBAJ_T0007186.1 MGP_CBAJ_G0005887.1 mouse_genomes_project 2 116120157 116187463 - Gm14015 lincRNA lincRNA MGP_CBAJ_T0013574.1 MGP_CBAJ_G0011686.1 mouse_genomes_project 2 142768404 142769724 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0053507.1 MGP_CBAJ_G0025284.1 mouse_genomes_project 2 31066347 31075209 - 1700001O22Rik protein_coding processed_transcript MGP_CBAJ_T0053508.1 MGP_CBAJ_G0025284.1 mouse_genomes_project 2 31066879 31073285 - MGP_CBAJ_P0053508 1700001O22Rik protein_coding protein_coding MGP_CBAJ_T0053509.1 MGP_CBAJ_G0025284.1 mouse_genomes_project 2 31067046 31068243 - 1700001O22Rik protein_coding processed_transcript MGP_CBAJ_T0053510.1 MGP_CBAJ_G0025284.1 mouse_genomes_project 2 31067141 31075235 - 1700001O22Rik protein_coding processed_transcript MGP_CBAJ_T0053511.1 MGP_CBAJ_G0025284.1 mouse_genomes_project 2 31067144 31075218 - 1700001O22Rik protein_coding processed_transcript MGP_CBAJ_T0053512.1 MGP_CBAJ_G0025284.1 mouse_genomes_project 2 31067151 31072579 - 1700001O22Rik protein_coding processed_transcript MGP_CBAJ_T0053513.1 MGP_CBAJ_G0025284.1 mouse_genomes_project 2 31067158 31075231 - 1700001O22Rik protein_coding processed_transcript MGP_CBAJ_T0053514.1 MGP_CBAJ_G0025284.1 mouse_genomes_project 2 31067182 31075217 - 1700001O22Rik protein_coding processed_transcript MGP_CBAJ_T0053515.1 MGP_CBAJ_G0025284.1 mouse_genomes_project 2 31067235 31075218 - 1700001O22Rik protein_coding processed_transcript MGP_CBAJ_T0053516.1 MGP_CBAJ_G0025284.1 mouse_genomes_project 2 31067252 31068454 - 1700001O22Rik protein_coding processed_transcript MGP_CBAJ_T0053517.1 MGP_CBAJ_G0025284.1 mouse_genomes_project 2 31067686 31075218 - 1700001O22Rik protein_coding processed_transcript MGP_CBAJ_T0053518.1 MGP_CBAJ_G0025284.1 mouse_genomes_project 2 31067760 31075218 - 1700001O22Rik protein_coding processed_transcript MGP_CBAJ_T0053519.1 MGP_CBAJ_G0025284.1 mouse_genomes_project 2 31068831 31075197 - 1700001O22Rik protein_coding processed_transcript MGP_CBAJ_T0004098.1 MGP_CBAJ_G0003618.1 mouse_genomes_project 2 188314661 188316655 + Bcas1os1 antisense antisense MGP_CBAJ_T0058088.1 MGP_CBAJ_G0026408.1 mouse_genomes_project 2 169662435 169700163 - MGP_CBAJ_P0058088 Cdk5rap1 protein_coding protein_coding MGP_CBAJ_T0058089.1 MGP_CBAJ_G0026408.1 mouse_genomes_project 2 169662441 169699884 - MGP_CBAJ_P0058089 Cdk5rap1 protein_coding protein_coding MGP_CBAJ_T0058090.1 MGP_CBAJ_G0026408.1 mouse_genomes_project 2 169669330 169699926 - Cdk5rap1 protein_coding processed_transcript MGP_CBAJ_T0058091.1 MGP_CBAJ_G0026408.1 mouse_genomes_project 2 169680143 169683881 - Cdk5rap1 protein_coding retained_intron MGP_CBAJ_T0058092.1 MGP_CBAJ_G0026408.1 mouse_genomes_project 2 169685535 169699896 - MGP_CBAJ_P0058092 Cdk5rap1 protein_coding protein_coding MGP_CBAJ_T0058093.1 MGP_CBAJ_G0026408.1 mouse_genomes_project 2 169693017 169697962 - Cdk5rap1 protein_coding processed_transcript MGP_CBAJ_T0058094.1 MGP_CBAJ_G0026408.1 mouse_genomes_project 2 169697854 169699856 - Cdk5rap1 protein_coding processed_transcript MGP_CBAJ_T0099094.1 MGP_CBAJ_G0037349.1 mouse_genomes_project 2 24784224 24784319 + Gm25220 snRNA snRNA MGP_CBAJ_T0054762.1 MGP_CBAJ_G0025508.1 mouse_genomes_project 2 73840607 73861712 + G6pc2 protein_coding processed_transcript MGP_CBAJ_T0054763.1 MGP_CBAJ_G0025508.1 mouse_genomes_project 2 73855000 73862870 + MGP_CBAJ_P0054763 G6pc2 protein_coding protein_coding MGP_CBAJ_T0054764.1 MGP_CBAJ_G0025508.1 mouse_genomes_project 2 73855027 73862870 + MGP_CBAJ_P0054764 G6pc2 protein_coding protein_coding MGP_CBAJ_T0054765.1 MGP_CBAJ_G0025508.1 mouse_genomes_project 2 73855057 73861864 + G6pc2 protein_coding processed_transcript MGP_CBAJ_T0013615.1 MGP_CBAJ_G0011727.1 mouse_genomes_project 2 159673451 159673915 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057181.1 MGP_CBAJ_G0026172.1 mouse_genomes_project 2 141083679 141086154 + MGP_CBAJ_P0057181 protein_coding protein_coding MGP_CBAJ_T0057182.1 MGP_CBAJ_G0026172.1 mouse_genomes_project 2 141083742 141090473 + MGP_CBAJ_P0057182 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057183.1 MGP_CBAJ_G0026172.1 mouse_genomes_project 2 141086474 141089130 + MGP_CBAJ_P0057183 protein_coding protein_coding MGP_CBAJ_T0058943.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182778775 182895203 - MGP_CBAJ_P0058943 Zmynd8 protein_coding protein_coding MGP_CBAJ_T0058944.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182778775 182865856 - MGP_CBAJ_P0058944 Zmynd8 protein_coding protein_coding MGP_CBAJ_T0058945.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182778778 182892732 - MGP_CBAJ_P0058945 Zmynd8 protein_coding protein_coding MGP_CBAJ_T0058946.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182778778 182892732 - MGP_CBAJ_P0058946 Zmynd8 protein_coding protein_coding MGP_CBAJ_T0058947.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182779986 182895224 - MGP_CBAJ_P0058947 Zmynd8 protein_coding protein_coding MGP_CBAJ_T0058948.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182780013 182895100 - Zmynd8 protein_coding processed_transcript MGP_CBAJ_T0058949.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182780013 182886100 - MGP_CBAJ_P0058949 Zmynd8 protein_coding protein_coding MGP_CBAJ_T0058950.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182780223 182895326 - MGP_CBAJ_P0058950 Zmynd8 protein_coding protein_coding MGP_CBAJ_T0058951.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182827428 182883448 - MGP_CBAJ_P0058951 Zmynd8 protein_coding protein_coding MGP_CBAJ_T0058952.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182827484 182911630 - MGP_CBAJ_P0058952 Zmynd8 protein_coding protein_coding MGP_CBAJ_T0058953.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182833442 182865856 - Zmynd8 protein_coding processed_transcript MGP_CBAJ_T0058954.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182845724 182915241 - MGP_CBAJ_P0058954 Zmynd8 protein_coding protein_coding MGP_CBAJ_T0058955.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182848463 182869679 - Zmynd8 protein_coding processed_transcript MGP_CBAJ_T0058956.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182851425 182859835 - Zmynd8 protein_coding processed_transcript MGP_CBAJ_T0058957.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182859745 182884271 - Zmynd8 protein_coding processed_transcript MGP_CBAJ_T0058958.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182859745 182884079 - MGP_CBAJ_P0058958 Zmynd8 protein_coding protein_coding MGP_CBAJ_T0058959.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182859746 182890367 - Zmynd8 protein_coding processed_transcript MGP_CBAJ_T0058960.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182880678 182894661 - Zmynd8 protein_coding processed_transcript MGP_CBAJ_T0058961.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182882541 182894690 - Zmynd8 protein_coding retained_intron MGP_CBAJ_T0058962.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182882819 182883861 - Zmynd8 protein_coding retained_intron MGP_CBAJ_T0058963.1 MGP_CBAJ_G0026594.1 mouse_genomes_project 2 182882927 182895203 - Zmynd8 protein_coding retained_intron MGP_CBAJ_T0013412.1 MGP_CBAJ_G0011524.1 mouse_genomes_project 2 75490824 75491073 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010271.1 MGP_CBAJ_G0008409.1 mouse_genomes_project 2 32009549 32009613 + Mir6998 miRNA miRNA MGP_CBAJ_T0054446.1 MGP_CBAJ_G0025452.1 mouse_genomes_project 2 57130116 57131576 - MGP_CBAJ_P0054446 Rprm protein_coding protein_coding MGP_CBAJ_T0055487.1 MGP_CBAJ_G0025751.1 mouse_genomes_project 2 95224164 95225145 - MGP_CBAJ_P0055487 Olfr1164 protein_coding protein_coding MGP_CBAJ_T0007239.1 MGP_CBAJ_G0005930.1 mouse_genomes_project 2 151139752 151314557 + Gm14064 lincRNA lincRNA MGP_CBAJ_T0056026.1 MGP_CBAJ_G0025898.1 mouse_genomes_project 2 111978218 112077284 - MGP_CBAJ_P0056026 Cd44 protein_coding protein_coding MGP_CBAJ_T0056027.1 MGP_CBAJ_G0025898.1 mouse_genomes_project 2 111978218 112077244 - MGP_CBAJ_P0056027 Cd44 protein_coding protein_coding MGP_CBAJ_T0056028.1 MGP_CBAJ_G0025898.1 mouse_genomes_project 2 111979615 112077114 - MGP_CBAJ_P0056028 Cd44 protein_coding protein_coding MGP_CBAJ_T0056029.1 MGP_CBAJ_G0025898.1 mouse_genomes_project 2 111979636 112077129 - MGP_CBAJ_P0056029 Cd44 protein_coding protein_coding MGP_CBAJ_T0056030.1 MGP_CBAJ_G0025898.1 mouse_genomes_project 2 111981203 112076988 - MGP_CBAJ_P0056030 Cd44 protein_coding protein_coding MGP_CBAJ_T0056031.1 MGP_CBAJ_G0025898.1 mouse_genomes_project 2 111981203 112076969 - MGP_CBAJ_P0056031 Cd44 protein_coding protein_coding MGP_CBAJ_T0056032.1 MGP_CBAJ_G0025898.1 mouse_genomes_project 2 111981213 112076969 - MGP_CBAJ_P0056032 Cd44 protein_coding protein_coding MGP_CBAJ_T0056033.1 MGP_CBAJ_G0025898.1 mouse_genomes_project 2 111981216 112076965 - MGP_CBAJ_P0056033 Cd44 protein_coding protein_coding MGP_CBAJ_T0056034.1 MGP_CBAJ_G0025898.1 mouse_genomes_project 2 112021041 112077077 - Cd44 protein_coding retained_intron MGP_CBAJ_T0010252.1 MGP_CBAJ_G0008390.1 mouse_genomes_project 2 18894605 18894681 + Gm44457 miRNA miRNA MGP_CBAJ_T0003920.1 MGP_CBAJ_G0003493.1 mouse_genomes_project 2 73886803 73914511 + Gm13613 antisense antisense MGP_CBAJ_T0059376.1 MGP_CBAJ_G0026696.1 mouse_genomes_project 2 199731733 199734253 - MGP_CBAJ_P0059376 Bhlhe23 protein_coding protein_coding MGP_CBAJ_T0054753.1 MGP_CBAJ_G0025506.1 mouse_genomes_project 2 73748835 73810875 + MGP_CBAJ_P0054753 Nostrin protein_coding protein_coding MGP_CBAJ_T0054754.1 MGP_CBAJ_G0025506.1 mouse_genomes_project 2 73800013 73807099 + Nostrin protein_coding processed_transcript MGP_CBAJ_T0056347.1 MGP_CBAJ_G0025997.1 mouse_genomes_project 2 124593629 124601951 - MGP_CBAJ_P0056347 Actc1 protein_coding protein_coding MGP_CBAJ_T0056348.1 MGP_CBAJ_G0025997.1 mouse_genomes_project 2 124593813 124599185 - MGP_CBAJ_P0056348 Actc1 protein_coding unknown_likely_coding MGP_CBAJ_T0056349.1 MGP_CBAJ_G0025997.1 mouse_genomes_project 2 124599056 124602604 - MGP_CBAJ_P0056349 Actc1 protein_coding protein_coding MGP_CBAJ_T0055407.1 MGP_CBAJ_G0025683.1 mouse_genomes_project 2 93288507 93289449 + MGP_CBAJ_P0055407 Olfr1076 protein_coding protein_coding MGP_CBAJ_T0057047.1 MGP_CBAJ_G0026141.1 mouse_genomes_project 2 138889172 138940750 - MGP_CBAJ_P0057047 Gabpb1 protein_coding protein_coding MGP_CBAJ_T0057048.1 MGP_CBAJ_G0026141.1 mouse_genomes_project 2 138890643 138940684 - MGP_CBAJ_P0057048 Gabpb1 protein_coding protein_coding MGP_CBAJ_T0057049.1 MGP_CBAJ_G0026141.1 mouse_genomes_project 2 138890645 138940726 - MGP_CBAJ_P0057049 Gabpb1 protein_coding protein_coding MGP_CBAJ_T0057050.1 MGP_CBAJ_G0026141.1 mouse_genomes_project 2 138900419 138941517 - MGP_CBAJ_P0057050 Gabpb1 protein_coding protein_coding MGP_CBAJ_T0057051.1 MGP_CBAJ_G0026141.1 mouse_genomes_project 2 138900804 138940668 - MGP_CBAJ_P0057051 Gabpb1 protein_coding protein_coding MGP_CBAJ_T0057052.1 MGP_CBAJ_G0026141.1 mouse_genomes_project 2 138909556 138940774 - MGP_CBAJ_P0057052 Gabpb1 protein_coding protein_coding MGP_CBAJ_T0057053.1 MGP_CBAJ_G0026141.1 mouse_genomes_project 2 138914149 138940521 - Gabpb1 protein_coding processed_transcript MGP_CBAJ_T0057054.1 MGP_CBAJ_G0026141.1 mouse_genomes_project 2 138915440 138940534 - MGP_CBAJ_P0057054 Gabpb1 protein_coding protein_coding MGP_CBAJ_T0057055.1 MGP_CBAJ_G0026141.1 mouse_genomes_project 2 138915517 138924945 - MGP_CBAJ_P0057055 Gabpb1 protein_coding protein_coding MGP_CBAJ_T0013311.1 MGP_CBAJ_G0011423.1 mouse_genomes_project 2 36460958 36461480 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007062.1 MGP_CBAJ_G0005787.1 mouse_genomes_project 2 25752079 25757029 - Gm13553 lincRNA lincRNA MGP_CBAJ_T0055242.1 MGP_CBAJ_G0025607.1 mouse_genomes_project 2 90344208 90372156 - MGP_CBAJ_P0055242 Zswim2 protein_coding protein_coding MGP_CBAJ_T0055243.1 MGP_CBAJ_G0025607.1 mouse_genomes_project 2 90345898 90372158 - MGP_CBAJ_P0055243 Zswim2 protein_coding protein_coding MGP_CBAJ_T0055244.1 MGP_CBAJ_G0025607.1 mouse_genomes_project 2 90352058 90361142 - Zswim2 protein_coding processed_transcript MGP_CBAJ_T0013444.1 MGP_CBAJ_G0011556.1 mouse_genomes_project 2 86494086 86494368 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010318.1 MGP_CBAJ_G0008456.1 mouse_genomes_project 2 113799210 113799290 - Mir1902 miRNA miRNA MGP_CBAJ_T0099086.1 MGP_CBAJ_G0037341.1 mouse_genomes_project 2 2513566 2513753 - Gm23118 snRNA snRNA MGP_CBAJ_T0052844.1 MGP_CBAJ_G0025169.1 mouse_genomes_project 2 25057508 25063821 - MGP_CBAJ_P0052844 Gm996 protein_coding protein_coding MGP_CBAJ_T0052845.1 MGP_CBAJ_G0025169.1 mouse_genomes_project 2 25057522 25063850 - MGP_CBAJ_P0052845 Gm996 protein_coding protein_coding MGP_CBAJ_T0052846.1 MGP_CBAJ_G0025169.1 mouse_genomes_project 2 25059065 25061990 - MGP_CBAJ_P0052846 Gm996 protein_coding protein_coding MGP_CBAJ_T0052847.1 MGP_CBAJ_G0025169.1 mouse_genomes_project 2 25061903 25062356 - MGP_CBAJ_P0052847 Gm996 protein_coding protein_coding MGP_CBAJ_T0010224.1 MGP_CBAJ_G0008362.1 mouse_genomes_project 2 8377297 8377394 + Mir467c miRNA miRNA MGP_CBAJ_T0053041.1 MGP_CBAJ_G0025206.1 mouse_genomes_project 2 26237156 26248274 + MGP_CBAJ_P0053041 Fam69b protein_coding protein_coding MGP_CBAJ_T0053042.1 MGP_CBAJ_G0025206.1 mouse_genomes_project 2 26237193 26244784 + Fam69b protein_coding processed_transcript MGP_CBAJ_T0053043.1 MGP_CBAJ_G0025206.1 mouse_genomes_project 2 26245979 26246802 + Fam69b protein_coding processed_transcript MGP_CBAJ_T0013358.1 MGP_CBAJ_G0011470.1 mouse_genomes_project 2 54598553 54599218 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057586.1 MGP_CBAJ_G0026262.1 mouse_genomes_project 2 151760350 152052194 + Btbd3 protein_coding processed_transcript MGP_CBAJ_T0057587.1 MGP_CBAJ_G0026262.1 mouse_genomes_project 2 151760358 152087753 + Btbd3 protein_coding processed_transcript MGP_CBAJ_T0057588.1 MGP_CBAJ_G0026262.1 mouse_genomes_project 2 151782675 151788258 + MGP_CBAJ_P0057588 Btbd3 protein_coding protein_coding MGP_CBAJ_T0054215.1 MGP_CBAJ_G0025416.1 mouse_genomes_project 2 39934675 39952386 - MGP_CBAJ_P0054215 Nr5a1 protein_coding unknown_likely_coding MGP_CBAJ_T0054216.1 MGP_CBAJ_G0025416.1 mouse_genomes_project 2 39941978 39951831 - Nr5a1 protein_coding retained_intron MGP_CBAJ_T0053773.1 MGP_CBAJ_G0025320.1 mouse_genomes_project 2 33052253 33058750 + MGP_CBAJ_P0053773 Naif1 protein_coding protein_coding MGP_CBAJ_T0013503.1 MGP_CBAJ_G0011615.1 mouse_genomes_project 2 108366037 108366665 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010262.1 MGP_CBAJ_G0008400.1 mouse_genomes_project 2 27158824 27158924 + Gm24049 miRNA miRNA MGP_CBAJ_T0013515.1 MGP_CBAJ_G0011627.1 mouse_genomes_project 2 113067796 113068528 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055564.1 MGP_CBAJ_G0025813.1 mouse_genomes_project 2 97545724 97549154 + MGP_CBAJ_P0055564 Olfr1258 protein_coding protein_coding MGP_CBAJ_T0055565.1 MGP_CBAJ_G0025813.1 mouse_genomes_project 2 97548218 97549154 + MGP_CBAJ_P0055565 Olfr1258 protein_coding protein_coding MGP_CBAJ_T0056276.1 MGP_CBAJ_G0025958.1 mouse_genomes_project 2 121532020 121533009 + MGP_CBAJ_P0056276 protein_coding protein_coding MGP_CBAJ_T0057961.1 MGP_CBAJ_G0026374.1 mouse_genomes_project 2 167886541 167940199 - MGP_CBAJ_P0057961 Bcl2l1 protein_coding protein_coding MGP_CBAJ_T0057962.1 MGP_CBAJ_G0026374.1 mouse_genomes_project 2 167886545 167939137 - MGP_CBAJ_P0057962 Bcl2l1 protein_coding protein_coding MGP_CBAJ_T0057963.1 MGP_CBAJ_G0026374.1 mouse_genomes_project 2 167887284 167937012 - Bcl2l1 protein_coding processed_transcript MGP_CBAJ_T0057964.1 MGP_CBAJ_G0026374.1 mouse_genomes_project 2 167936603 167939112 - MGP_CBAJ_P0057964 Bcl2l1 protein_coding protein_coding MGP_CBAJ_T0057965.1 MGP_CBAJ_G0026374.1 mouse_genomes_project 2 167936838 167938787 - MGP_CBAJ_P0057965 Bcl2l1 protein_coding protein_coding MGP_CBAJ_T0057966.1 MGP_CBAJ_G0026374.1 mouse_genomes_project 2 167937903 167939583 - MGP_CBAJ_P0057966 Bcl2l1 protein_coding protein_coding MGP_CBAJ_T0057967.1 MGP_CBAJ_G0026374.1 mouse_genomes_project 2 167938005 167939123 - MGP_CBAJ_P0057967 Bcl2l1 protein_coding protein_coding MGP_CBAJ_T0057968.1 MGP_CBAJ_G0026374.1 mouse_genomes_project 2 167938177 167939089 - MGP_CBAJ_P0057968 Bcl2l1 protein_coding protein_coding MGP_CBAJ_T0057969.1 MGP_CBAJ_G0026374.1 mouse_genomes_project 2 167938233 167940181 - MGP_CBAJ_P0057969 Bcl2l1 protein_coding protein_coding MGP_CBAJ_T0054067.1 MGP_CBAJ_G0025367.1 mouse_genomes_project 2 36361345 36397587 - MGP_CBAJ_P0054067 Ggta1 protein_coding protein_coding MGP_CBAJ_T0054068.1 MGP_CBAJ_G0025367.1 mouse_genomes_project 2 36361345 36436759 - MGP_CBAJ_P0054068 Ggta1 protein_coding protein_coding MGP_CBAJ_T0054069.1 MGP_CBAJ_G0025367.1 mouse_genomes_project 2 36361349 36436942 - MGP_CBAJ_P0054069 Ggta1 protein_coding protein_coding MGP_CBAJ_T0054070.1 MGP_CBAJ_G0025367.1 mouse_genomes_project 2 36361349 36436742 - MGP_CBAJ_P0054070 Ggta1 protein_coding protein_coding MGP_CBAJ_T0054071.1 MGP_CBAJ_G0025367.1 mouse_genomes_project 2 36363275 36386217 - MGP_CBAJ_P0054071 Ggta1 protein_coding protein_coding MGP_CBAJ_T0054072.1 MGP_CBAJ_G0025367.1 mouse_genomes_project 2 36363275 36386217 - MGP_CBAJ_P0054072 Ggta1 protein_coding protein_coding MGP_CBAJ_T0054073.1 MGP_CBAJ_G0025367.1 mouse_genomes_project 2 36370866 36407702 - MGP_CBAJ_P0054073 Ggta1 protein_coding protein_coding MGP_CBAJ_T0054074.1 MGP_CBAJ_G0025367.1 mouse_genomes_project 2 36386218 36411353 - Ggta1 protein_coding processed_transcript MGP_CBAJ_T0054075.1 MGP_CBAJ_G0025367.1 mouse_genomes_project 2 36397467 36440861 - Ggta1 protein_coding processed_transcript MGP_CBAJ_T0013295.1 MGP_CBAJ_G0011407.1 mouse_genomes_project 2 26752657 26753535 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013687.1 MGP_CBAJ_G0011799.1 mouse_genomes_project 2 185735110 185735540 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001009.1 MGP_CBAJ_G0000941.1 mouse_genomes_project 2 12342086 12346050 - TEC TEC MGP_CBAJ_T0056198.1 MGP_CBAJ_G0025930.1 mouse_genomes_project 2 115494196 115551544 + MGP_CBAJ_P0056198 Immp1l protein_coding protein_coding MGP_CBAJ_T0055245.1 MGP_CBAJ_G0025608.1 mouse_genomes_project 2 90387557 90388130 + MGP_CBAJ_P0055245 protein_coding protein_coding MGP_CBAJ_T0003849.1 MGP_CBAJ_G0003438.1 mouse_genomes_project 2 25608169 25612556 + antisense antisense MGP_CBAJ_T0059053.1 MGP_CBAJ_G0026609.1 mouse_genomes_project 2 184826257 184849815 + MGP_CBAJ_P0059053 Rnf114 protein_coding protein_coding MGP_CBAJ_T0059054.1 MGP_CBAJ_G0026609.1 mouse_genomes_project 2 184836712 184849822 + MGP_CBAJ_P0059054 Rnf114 protein_coding protein_coding MGP_CBAJ_T0059055.1 MGP_CBAJ_G0026609.1 mouse_genomes_project 2 184837069 184849813 + MGP_CBAJ_P0059055 Rnf114 protein_coding nonsense_mediated_decay MGP_CBAJ_T0000994.1 MGP_CBAJ_G0000926.1 mouse_genomes_project 2 9323924 9324813 + TEC TEC MGP_CBAJ_T0101815.1 MGP_CBAJ_G0039846.1 mouse_genomes_project 2 95614403 95615339 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0101816.1 MGP_CBAJ_G0039847.1 mouse_genomes_project 2 95977331 95978791 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0053276.1 MGP_CBAJ_G0025252.1 mouse_genomes_project 2 29655923 29786830 + MGP_CBAJ_P0053276 Rapgef1 protein_coding protein_coding MGP_CBAJ_T0053277.1 MGP_CBAJ_G0025252.1 mouse_genomes_project 2 29655952 29787450 + MGP_CBAJ_P0053277 Rapgef1 protein_coding protein_coding MGP_CBAJ_T0053278.1 MGP_CBAJ_G0025252.1 mouse_genomes_project 2 29657111 29784794 + MGP_CBAJ_P0053278 Rapgef1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053279.1 MGP_CBAJ_G0025252.1 mouse_genomes_project 2 29657169 29786829 + MGP_CBAJ_P0053279 Rapgef1 protein_coding protein_coding MGP_CBAJ_T0053280.1 MGP_CBAJ_G0025252.1 mouse_genomes_project 2 29777258 29782315 + Rapgef1 protein_coding processed_transcript MGP_CBAJ_T0053281.1 MGP_CBAJ_G0025252.1 mouse_genomes_project 2 29779051 29780716 + Rapgef1 protein_coding retained_intron MGP_CBAJ_T0056707.1 MGP_CBAJ_G0026069.1 mouse_genomes_project 2 132092787 132110376 - MGP_CBAJ_P0056707 Cdan1 protein_coding protein_coding MGP_CBAJ_T0056708.1 MGP_CBAJ_G0026069.1 mouse_genomes_project 2 132093143 132110377 - MGP_CBAJ_P0056708 Cdan1 protein_coding protein_coding MGP_CBAJ_T0056709.1 MGP_CBAJ_G0026069.1 mouse_genomes_project 2 132094806 132223379 - Cdan1 protein_coding processed_transcript MGP_CBAJ_T0056710.1 MGP_CBAJ_G0026069.1 mouse_genomes_project 2 132095241 132097133 - Cdan1 protein_coding processed_transcript MGP_CBAJ_T0056711.1 MGP_CBAJ_G0026069.1 mouse_genomes_project 2 132101254 132103314 - Cdan1 protein_coding retained_intron MGP_CBAJ_T0056712.1 MGP_CBAJ_G0026069.1 mouse_genomes_project 2 132104469 132106836 - Cdan1 protein_coding retained_intron MGP_CBAJ_T0056713.1 MGP_CBAJ_G0026069.1 mouse_genomes_project 2 132106776 132107497 - Cdan1 protein_coding retained_intron MGP_CBAJ_T0056714.1 MGP_CBAJ_G0026069.1 mouse_genomes_project 2 132107486 132110365 - Cdan1 protein_coding processed_transcript MGP_CBAJ_T0056715.1 MGP_CBAJ_G0026069.1 mouse_genomes_project 2 132108800 132110349 - Cdan1 protein_coding processed_transcript MGP_CBAJ_T0057930.1 MGP_CBAJ_G0026355.1 mouse_genomes_project 2 167445987 167449051 - MGP_CBAJ_P0057930 Zcchc3 protein_coding protein_coding MGP_CBAJ_T0053861.1 MGP_CBAJ_G0025335.1 mouse_genomes_project 2 33439897 33441709 + MGP_CBAJ_P0053861 Ptrh1 protein_coding protein_coding MGP_CBAJ_T0053862.1 MGP_CBAJ_G0025335.1 mouse_genomes_project 2 33439927 33440867 + Ptrh1 protein_coding processed_transcript MGP_CBAJ_T0053863.1 MGP_CBAJ_G0025335.1 mouse_genomes_project 2 33439976 33441561 + Ptrh1 protein_coding retained_intron MGP_CBAJ_T0017543.1 MGP_CBAJ_G0015181.1 mouse_genomes_project 2 95968596 95978310 + processed_transcript processed_transcript MGP_CBAJ_T0059352.1 MGP_CBAJ_G0026691.1 mouse_genomes_project 2 199534136 199558463 + MGP_CBAJ_P0059352 Col9a3 protein_coding protein_coding MGP_CBAJ_T0059353.1 MGP_CBAJ_G0026691.1 mouse_genomes_project 2 199534568 199558459 + MGP_CBAJ_P0059353 Col9a3 protein_coding protein_coding MGP_CBAJ_T0059354.1 MGP_CBAJ_G0026691.1 mouse_genomes_project 2 199535152 199542122 + Col9a3 protein_coding retained_intron MGP_CBAJ_T0059355.1 MGP_CBAJ_G0026691.1 mouse_genomes_project 2 199539529 199549762 + Col9a3 protein_coding retained_intron MGP_CBAJ_T0059356.1 MGP_CBAJ_G0026691.1 mouse_genomes_project 2 199550459 199557572 + Col9a3 protein_coding retained_intron MGP_CBAJ_T0059357.1 MGP_CBAJ_G0026691.1 mouse_genomes_project 2 199552612 199557876 + Col9a3 protein_coding retained_intron MGP_CBAJ_T0055509.1 MGP_CBAJ_G0025772.1 mouse_genomes_project 2 96369729 96370662 - MGP_CBAJ_P0055509 Olfr1209 protein_coding protein_coding MGP_CBAJ_T0057771.1 MGP_CBAJ_G0026307.1 mouse_genomes_project 2 162991092 162998003 - MGP_CBAJ_P0057771 Cd93 protein_coding protein_coding MGP_CBAJ_T0057127.1 MGP_CBAJ_G0026157.1 mouse_genomes_project 2 139731714 139735772 + MGP_CBAJ_P0057127 Adra2b protein_coding protein_coding MGP_CBAJ_T0057128.1 MGP_CBAJ_G0026157.1 mouse_genomes_project 2 139731792 139735772 + MGP_CBAJ_P0057128 Adra2b protein_coding protein_coding MGP_CBAJ_T0058487.1 MGP_CBAJ_G0026475.1 mouse_genomes_project 2 173209891 173240957 + MGP_CBAJ_P0058487 Manbal protein_coding protein_coding MGP_CBAJ_T0101790.1 MGP_CBAJ_G0039821.1 mouse_genomes_project 2 91935137 91936033 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0007150.1 MGP_CBAJ_G0005858.1 mouse_genomes_project 2 85339128 85346254 + Gm26755 lincRNA lincRNA MGP_CBAJ_T0059310.1 MGP_CBAJ_G0026680.1 mouse_genomes_project 2 198993046 199043116 + MGP_CBAJ_P0059310 Osbpl2 protein_coding protein_coding MGP_CBAJ_T0059311.1 MGP_CBAJ_G0026680.1 mouse_genomes_project 2 198993075 199014004 + Osbpl2 protein_coding processed_transcript MGP_CBAJ_T0059312.1 MGP_CBAJ_G0026680.1 mouse_genomes_project 2 198993144 199036146 + Osbpl2 protein_coding retained_intron MGP_CBAJ_T0059313.1 MGP_CBAJ_G0026680.1 mouse_genomes_project 2 199026329 199028359 + Osbpl2 protein_coding retained_intron MGP_CBAJ_T0055311.1 MGP_CBAJ_G0025623.1 mouse_genomes_project 2 91308917 91323276 - MGP_CBAJ_P0055311 Smtnl1 protein_coding protein_coding MGP_CBAJ_T0052134.1 MGP_CBAJ_G0025049.1 mouse_genomes_project 2 7907070 7936848 - MGP_CBAJ_P0052134 Atp5c1 protein_coding protein_coding MGP_CBAJ_T0052135.1 MGP_CBAJ_G0025049.1 mouse_genomes_project 2 7907084 7936931 - MGP_CBAJ_P0052135 Atp5c1 protein_coding protein_coding MGP_CBAJ_T0052136.1 MGP_CBAJ_G0025049.1 mouse_genomes_project 2 7907084 7936865 - MGP_CBAJ_P0052136 Atp5c1 protein_coding protein_coding MGP_CBAJ_T0052137.1 MGP_CBAJ_G0025049.1 mouse_genomes_project 2 7910046 7936824 - MGP_CBAJ_P0052137 Atp5c1 protein_coding protein_coding MGP_CBAJ_T0052138.1 MGP_CBAJ_G0025049.1 mouse_genomes_project 2 7915957 7936597 - MGP_CBAJ_P0052138 Atp5c1 protein_coding protein_coding MGP_CBAJ_T0052139.1 MGP_CBAJ_G0025049.1 mouse_genomes_project 2 7920581 7936476 - MGP_CBAJ_P0052139 Atp5c1 protein_coding protein_coding MGP_CBAJ_T0052147.1 MGP_CBAJ_G0025053.1 mouse_genomes_project 2 8263897 8340806 + MGP_CBAJ_P0052147 Sfmbt2 protein_coding protein_coding MGP_CBAJ_T0052148.1 MGP_CBAJ_G0025053.1 mouse_genomes_project 2 8263898 8340806 + MGP_CBAJ_P0052148 Sfmbt2 protein_coding protein_coding MGP_CBAJ_T0052149.1 MGP_CBAJ_G0025053.1 mouse_genomes_project 2 8263905 8300907 + Sfmbt2 protein_coding processed_transcript MGP_CBAJ_T0052150.1 MGP_CBAJ_G0025053.1 mouse_genomes_project 2 8268167 8340806 + MGP_CBAJ_P0052150 Sfmbt2 protein_coding protein_coding MGP_CBAJ_T0052151.1 MGP_CBAJ_G0025053.1 mouse_genomes_project 2 8268167 8500070 + MGP_CBAJ_P0052151 Sfmbt2 protein_coding protein_coding MGP_CBAJ_T0052152.1 MGP_CBAJ_G0025053.1 mouse_genomes_project 2 8268179 8289411 + Sfmbt2 protein_coding processed_transcript MGP_CBAJ_T0052153.1 MGP_CBAJ_G0025053.1 mouse_genomes_project 2 8268181 8500082 + MGP_CBAJ_P0052153 Sfmbt2 protein_coding protein_coding MGP_CBAJ_T0053210.1 MGP_CBAJ_G0025241.1 mouse_genomes_project 2 28539205 28573031 + MGP_CBAJ_P0053210 Tsc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053211.1 MGP_CBAJ_G0025241.1 mouse_genomes_project 2 28539214 28591687 + MGP_CBAJ_P0053211 Tsc1 protein_coding protein_coding MGP_CBAJ_T0053212.1 MGP_CBAJ_G0025241.1 mouse_genomes_project 2 28539218 28589068 + MGP_CBAJ_P0053212 Tsc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053213.1 MGP_CBAJ_G0025241.1 mouse_genomes_project 2 28539218 28591687 + MGP_CBAJ_P0053213 Tsc1 protein_coding protein_coding MGP_CBAJ_T0053214.1 MGP_CBAJ_G0025241.1 mouse_genomes_project 2 28539220 28591687 + MGP_CBAJ_P0053214 Tsc1 protein_coding protein_coding MGP_CBAJ_T0053215.1 MGP_CBAJ_G0025241.1 mouse_genomes_project 2 28539227 28574277 + Tsc1 protein_coding retained_intron MGP_CBAJ_T0053216.1 MGP_CBAJ_G0025241.1 mouse_genomes_project 2 28539231 28568483 + Tsc1 protein_coding retained_intron MGP_CBAJ_T0053217.1 MGP_CBAJ_G0025241.1 mouse_genomes_project 2 28559105 28591687 + MGP_CBAJ_P0053217 Tsc1 protein_coding protein_coding MGP_CBAJ_T0053218.1 MGP_CBAJ_G0025241.1 mouse_genomes_project 2 28563915 28566489 + Tsc1 protein_coding retained_intron MGP_CBAJ_T0053219.1 MGP_CBAJ_G0025241.1 mouse_genomes_project 2 28571538 28573711 + Tsc1 protein_coding retained_intron MGP_CBAJ_T0053220.1 MGP_CBAJ_G0025241.1 mouse_genomes_project 2 28572801 28573853 + Tsc1 protein_coding retained_intron MGP_CBAJ_T0013473.1 MGP_CBAJ_G0011585.1 mouse_genomes_project 2 94593093 94593386 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013575.1 MGP_CBAJ_G0011687.1 mouse_genomes_project 2 143100997 143101830 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010306.1 MGP_CBAJ_G0008444.1 mouse_genomes_project 2 100207205 100207303 + Mir1955 miRNA miRNA MGP_CBAJ_T0010351.1 MGP_CBAJ_G0008489.1 mouse_genomes_project 2 174772692 174772818 + Gm26141 miRNA miRNA MGP_CBAJ_T0010367.1 MGP_CBAJ_G0008505.1 mouse_genomes_project 2 199300876 199300953 + Mir1a-1 miRNA miRNA MGP_CBAJ_T0010327.1 MGP_CBAJ_G0008465.1 mouse_genomes_project 2 132892445 132892546 - Gm22953 miRNA miRNA MGP_CBAJ_T0013406.1 MGP_CBAJ_G0011518.1 mouse_genomes_project 2 72591034 72591573 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0017630.1 MGP_CBAJ_G0015222.1 mouse_genomes_project 2 167370817 167401195 + Gm14164 processed_transcript processed_transcript MGP_CBAJ_T0017631.1 MGP_CBAJ_G0015222.1 mouse_genomes_project 2 167400618 167401020 + Gm14164 processed_transcript processed_transcript MGP_CBAJ_T0051964.1 MGP_CBAJ_G0025021.1 mouse_genomes_project 2 453193 472914 - MGP_CBAJ_P0051964 Suv39h2 protein_coding protein_coding MGP_CBAJ_T0051965.1 MGP_CBAJ_G0025021.1 mouse_genomes_project 2 454958 472843 - MGP_CBAJ_P0051965 Suv39h2 protein_coding protein_coding MGP_CBAJ_T0051966.1 MGP_CBAJ_G0025021.1 mouse_genomes_project 2 454959 472302 - MGP_CBAJ_P0051966 Suv39h2 protein_coding protein_coding MGP_CBAJ_T0051967.1 MGP_CBAJ_G0025021.1 mouse_genomes_project 2 454981 472852 - MGP_CBAJ_P0051967 Suv39h2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054901.1 MGP_CBAJ_G0025535.1 mouse_genomes_project 2 76394062 76394529 - MGP_CBAJ_P0054901 protein_coding protein_coding MGP_CBAJ_T0007044.1 MGP_CBAJ_G0005775.1 mouse_genomes_project 2 17708377 17710951 - Carlr lincRNA lincRNA MGP_CBAJ_T0055418.1 MGP_CBAJ_G0025693.1 mouse_genomes_project 2 93797293 93827801 - MGP_CBAJ_P0055418 protein_coding protein_coding MGP_CBAJ_T0057935.1 MGP_CBAJ_G0026358.1 mouse_genomes_project 2 167526838 167529709 + MGP_CBAJ_P0057935 Defb20 protein_coding protein_coding MGP_CBAJ_T0059271.1 MGP_CBAJ_G0026670.1 mouse_genomes_project 2 197088211 197091478 - MGP_CBAJ_P0059271 Ppp1r3d protein_coding protein_coding MGP_CBAJ_T0100351.1 MGP_CBAJ_G0038606.1 mouse_genomes_project 2 32780005 32780090 + Gm22192 snoRNA snoRNA MGP_CBAJ_T0101295.1 MGP_CBAJ_G0039409.1 mouse_genomes_project 2 39909404 39928318 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0056059.1 MGP_CBAJ_G0025904.1 mouse_genomes_project 2 112819247 112972862 + MGP_CBAJ_P0056059 Abtb2 protein_coding protein_coding MGP_CBAJ_T0056060.1 MGP_CBAJ_G0025904.1 mouse_genomes_project 2 112969473 112971656 + Abtb2 protein_coding processed_transcript MGP_CBAJ_T0056061.1 MGP_CBAJ_G0025904.1 mouse_genomes_project 2 112969519 112972862 + Abtb2 protein_coding processed_transcript MGP_CBAJ_T0058831.1 MGP_CBAJ_G0026574.1 mouse_genomes_project 2 181634333 181641280 + MGP_CBAJ_P0058831 Ctsa protein_coding protein_coding MGP_CBAJ_T0058832.1 MGP_CBAJ_G0026574.1 mouse_genomes_project 2 181634333 181642298 + MGP_CBAJ_P0058832 Ctsa protein_coding protein_coding MGP_CBAJ_T0058833.1 MGP_CBAJ_G0026574.1 mouse_genomes_project 2 181634347 181635220 + Ctsa protein_coding processed_transcript MGP_CBAJ_T0058834.1 MGP_CBAJ_G0026574.1 mouse_genomes_project 2 181634361 181642298 + MGP_CBAJ_P0058834 Ctsa protein_coding protein_coding MGP_CBAJ_T0058835.1 MGP_CBAJ_G0026574.1 mouse_genomes_project 2 181634369 181635523 + MGP_CBAJ_P0058835 Ctsa protein_coding protein_coding MGP_CBAJ_T0058836.1 MGP_CBAJ_G0026574.1 mouse_genomes_project 2 181634386 181635240 + Ctsa protein_coding processed_transcript MGP_CBAJ_T0058837.1 MGP_CBAJ_G0026574.1 mouse_genomes_project 2 181634386 181637152 + MGP_CBAJ_P0058837 Ctsa protein_coding protein_coding MGP_CBAJ_T0058838.1 MGP_CBAJ_G0026574.1 mouse_genomes_project 2 181635267 181635882 + Ctsa protein_coding retained_intron MGP_CBAJ_T0058839.1 MGP_CBAJ_G0026574.1 mouse_genomes_project 2 181635275 181638249 + MGP_CBAJ_P0058839 Ctsa protein_coding protein_coding MGP_CBAJ_T0058840.1 MGP_CBAJ_G0026574.1 mouse_genomes_project 2 181635307 181636335 + Ctsa protein_coding retained_intron MGP_CBAJ_T0058841.1 MGP_CBAJ_G0026574.1 mouse_genomes_project 2 181635318 181637724 + MGP_CBAJ_P0058841 Ctsa protein_coding protein_coding MGP_CBAJ_T0058842.1 MGP_CBAJ_G0026574.1 mouse_genomes_project 2 181635490 181636654 + Ctsa protein_coding retained_intron MGP_CBAJ_T0058843.1 MGP_CBAJ_G0026574.1 mouse_genomes_project 2 181635490 181638282 + Ctsa protein_coding retained_intron MGP_CBAJ_T0058844.1 MGP_CBAJ_G0026574.1 mouse_genomes_project 2 181635533 181637719 + Ctsa protein_coding retained_intron MGP_CBAJ_T0058845.1 MGP_CBAJ_G0026574.1 mouse_genomes_project 2 181635770 181637182 + Ctsa protein_coding processed_transcript MGP_CBAJ_T0058846.1 MGP_CBAJ_G0026574.1 mouse_genomes_project 2 181635933 181636930 + Ctsa protein_coding retained_intron MGP_CBAJ_T0058847.1 MGP_CBAJ_G0026574.1 mouse_genomes_project 2 181638428 181638921 + Ctsa protein_coding retained_intron MGP_CBAJ_T0058265.1 MGP_CBAJ_G0026444.1 mouse_genomes_project 2 171510330 171514698 - MGP_CBAJ_P0058265 Gdf5 protein_coding protein_coding MGP_CBAJ_T0052532.1 MGP_CBAJ_G0025116.1 mouse_genomes_project 2 23522717 23536376 + MGP_CBAJ_P0052532 Il1f6 protein_coding protein_coding MGP_CBAJ_T0052533.1 MGP_CBAJ_G0025116.1 mouse_genomes_project 2 23522804 23536199 + Il1f6 protein_coding processed_transcript MGP_CBAJ_T0056798.1 MGP_CBAJ_G0026082.1 mouse_genomes_project 2 132715483 132736724 + MGP_CBAJ_P0056798 Map1a protein_coding protein_coding MGP_CBAJ_T0056799.1 MGP_CBAJ_G0026082.1 mouse_genomes_project 2 132715653 132716927 + Map1a protein_coding processed_transcript MGP_CBAJ_T0056800.1 MGP_CBAJ_G0026082.1 mouse_genomes_project 2 132721299 132735323 + MGP_CBAJ_P0056800 Map1a protein_coding protein_coding MGP_CBAJ_T0056801.1 MGP_CBAJ_G0026082.1 mouse_genomes_project 2 132721308 132733506 + Map1a protein_coding processed_transcript MGP_CBAJ_T0003998.1 MGP_CBAJ_G0003543.1 mouse_genomes_project 2 137292039 137304593 - Gm14002 antisense antisense MGP_CBAJ_T0054132.1 MGP_CBAJ_G0025387.1 mouse_genomes_project 2 37879582 37880524 - MGP_CBAJ_P0054132 Olfr3 protein_coding protein_coding MGP_CBAJ_T0059202.1 MGP_CBAJ_G0026653.1 mouse_genomes_project 2 191949721 191961285 - MGP_CBAJ_P0059202 Ankrd60 protein_coding protein_coding MGP_CBAJ_T0059203.1 MGP_CBAJ_G0026653.1 mouse_genomes_project 2 191949759 191961118 - MGP_CBAJ_P0059203 Ankrd60 protein_coding protein_coding MGP_CBAJ_T0059204.1 MGP_CBAJ_G0026653.1 mouse_genomes_project 2 191955306 191961193 - Ankrd60 protein_coding processed_transcript MGP_CBAJ_T0055424.1 MGP_CBAJ_G0025699.1 mouse_genomes_project 2 93938856 93939789 - MGP_CBAJ_P0055424 Olfr1104 protein_coding protein_coding MGP_CBAJ_T0007117.1 MGP_CBAJ_G0005832.1 mouse_genomes_project 2 72140165 72150417 - Gm26743 lincRNA lincRNA MGP_CBAJ_T0052831.1 MGP_CBAJ_G0025166.1 mouse_genomes_project 2 25037210 25041446 + MGP_CBAJ_P0052831 Edf1 protein_coding protein_coding MGP_CBAJ_T0052832.1 MGP_CBAJ_G0025166.1 mouse_genomes_project 2 25037234 25040725 + Edf1 protein_coding processed_transcript MGP_CBAJ_T0052833.1 MGP_CBAJ_G0025166.1 mouse_genomes_project 2 25037260 25040628 + Edf1 protein_coding processed_transcript MGP_CBAJ_T0052834.1 MGP_CBAJ_G0025166.1 mouse_genomes_project 2 25037502 25041225 + Edf1 protein_coding processed_transcript MGP_CBAJ_T0052835.1 MGP_CBAJ_G0025166.1 mouse_genomes_project 2 25039948 25041446 + Edf1 protein_coding processed_transcript MGP_CBAJ_T0013328.1 MGP_CBAJ_G0011440.1 mouse_genomes_project 2 40895636 40896119 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004115.1 MGP_CBAJ_G0003629.1 mouse_genomes_project 2 199244955 199252842 + Gata5os antisense antisense MGP_CBAJ_T0058760.1 MGP_CBAJ_G0026546.1 mouse_genomes_project 2 181158548 181165894 + Sys1 protein_coding processed_transcript MGP_CBAJ_T0058761.1 MGP_CBAJ_G0026546.1 mouse_genomes_project 2 181158560 181170435 + MGP_CBAJ_P0058761 Sys1 protein_coding protein_coding MGP_CBAJ_T0058762.1 MGP_CBAJ_G0026546.1 mouse_genomes_project 2 181158672 181166266 + Sys1 protein_coding processed_transcript MGP_CBAJ_T0058764.1 MGP_CBAJ_G0026546.1 mouse_genomes_project 2 181165928 181170431 + MGP_CBAJ_P0058764 Sys1 protein_coding protein_coding MGP_CBAJ_T0058765.1 MGP_CBAJ_G0026546.1 mouse_genomes_project 2 181165957 181179461 + MGP_CBAJ_P0058765 Sys1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058766.1 MGP_CBAJ_G0026546.1 mouse_genomes_project 2 181166010 181190227 + MGP_CBAJ_P0058766 Sys1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058767.1 MGP_CBAJ_G0026546.1 mouse_genomes_project 2 181166266 181179461 + MGP_CBAJ_P0058767 Sys1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0013579.1 MGP_CBAJ_G0011691.1 mouse_genomes_project 2 143782963 143783432 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013390.1 MGP_CBAJ_G0011502.1 mouse_genomes_project 2 65028870 65029161 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055446.1 MGP_CBAJ_G0025718.1 mouse_genomes_project 2 94539923 94542591 + Pramel6 protein_coding processed_transcript MGP_CBAJ_T0055447.1 MGP_CBAJ_G0025718.1 mouse_genomes_project 2 94539923 94542582 + Pramel6 protein_coding processed_transcript MGP_CBAJ_T0055448.1 MGP_CBAJ_G0025718.1 mouse_genomes_project 2 94539941 94542762 + Pramel6 protein_coding processed_transcript MGP_CBAJ_T0055449.1 MGP_CBAJ_G0025718.1 mouse_genomes_project 2 94540784 94542675 + Pramel6 protein_coding processed_transcript MGP_CBAJ_T0055450.1 MGP_CBAJ_G0025718.1 mouse_genomes_project 2 94540784 94544235 + MGP_CBAJ_P0055450 Pramel6 protein_coding protein_coding MGP_CBAJ_T0055451.1 MGP_CBAJ_G0025718.1 mouse_genomes_project 2 94541817 94544228 + MGP_CBAJ_P0055451 Pramel6 protein_coding protein_coding MGP_CBAJ_T0001065.1 MGP_CBAJ_G0000996.1 mouse_genomes_project 2 171692679 171694352 - TEC TEC MGP_CBAJ_T0013421.1 MGP_CBAJ_G0011533.1 mouse_genomes_project 2 78328986 78329477 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013536.1 MGP_CBAJ_G0011648.1 mouse_genomes_project 2 119439672 119440158 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0052209.1 MGP_CBAJ_G0025060.1 mouse_genomes_project 2 9810806 9811885 - Fbxo18 protein_coding processed_transcript MGP_CBAJ_T0052210.1 MGP_CBAJ_G0025060.1 mouse_genomes_project 2 9810808 9854358 - MGP_CBAJ_P0052210 Fbxo18 protein_coding protein_coding MGP_CBAJ_T0052211.1 MGP_CBAJ_G0025060.1 mouse_genomes_project 2 9811900 9817140 - Fbxo18 protein_coding retained_intron MGP_CBAJ_T0052212.1 MGP_CBAJ_G0025060.1 mouse_genomes_project 2 9815760 9854283 - Fbxo18 protein_coding retained_intron MGP_CBAJ_T0052213.1 MGP_CBAJ_G0025060.1 mouse_genomes_project 2 9816347 9834254 - MGP_CBAJ_P0052213 Fbxo18 protein_coding protein_coding MGP_CBAJ_T0052214.1 MGP_CBAJ_G0025060.1 mouse_genomes_project 2 9817365 9819677 - Fbxo18 protein_coding retained_intron MGP_CBAJ_T0052215.1 MGP_CBAJ_G0025060.1 mouse_genomes_project 2 9819586 9835171 - Fbxo18 protein_coding retained_intron MGP_CBAJ_T0052216.1 MGP_CBAJ_G0025060.1 mouse_genomes_project 2 9839629 9854326 - Fbxo18 protein_coding processed_transcript MGP_CBAJ_T0052217.1 MGP_CBAJ_G0025060.1 mouse_genomes_project 2 9840922 9854324 - Fbxo18 protein_coding processed_transcript MGP_CBAJ_T0052218.1 MGP_CBAJ_G0025060.1 mouse_genomes_project 2 9844192 9854283 - Fbxo18 protein_coding processed_transcript MGP_CBAJ_T0058539.1 MGP_CBAJ_G0026486.1 mouse_genomes_project 2 174274595 174291850 + Lbp protein_coding processed_transcript MGP_CBAJ_T0058540.1 MGP_CBAJ_G0026486.1 mouse_genomes_project 2 174274595 174278625 + MGP_CBAJ_P0058540 Lbp protein_coding protein_coding MGP_CBAJ_T0058541.1 MGP_CBAJ_G0026486.1 mouse_genomes_project 2 174274595 174303713 + MGP_CBAJ_P0058541 Lbp protein_coding protein_coding MGP_CBAJ_T0058542.1 MGP_CBAJ_G0026486.1 mouse_genomes_project 2 174274714 174289504 + Lbp protein_coding retained_intron MGP_CBAJ_T0058543.1 MGP_CBAJ_G0026486.1 mouse_genomes_project 2 174285076 174295531 + MGP_CBAJ_P0058543 Lbp protein_coding protein_coding MGP_CBAJ_T0098308.1 MGP_CBAJ_G0036575.1 mouse_genomes_project 2 4421742 4424283 - Gm10855 sense_intronic sense_intronic MGP_CBAJ_T0058067.1 MGP_CBAJ_G0026400.1 mouse_genomes_project 2 169270943 169275587 + Bpifb4 protein_coding retained_intron MGP_CBAJ_T0058068.1 MGP_CBAJ_G0026400.1 mouse_genomes_project 2 169270952 169298838 + MGP_CBAJ_P0058068 Bpifb4 protein_coding protein_coding MGP_CBAJ_T0058069.1 MGP_CBAJ_G0026400.1 mouse_genomes_project 2 169273847 169296801 + MGP_CBAJ_P0058069 Bpifb4 protein_coding protein_coding MGP_CBAJ_T0058070.1 MGP_CBAJ_G0026400.1 mouse_genomes_project 2 169275253 169277822 + Bpifb4 protein_coding retained_intron MGP_CBAJ_T0058071.1 MGP_CBAJ_G0026400.1 mouse_genomes_project 2 169276907 169296801 + MGP_CBAJ_P0058071 Bpifb4 protein_coding protein_coding MGP_CBAJ_T0058775.1 MGP_CBAJ_G0026550.1 mouse_genomes_project 2 181216516 181227285 + MGP_CBAJ_P0058775 Pigt protein_coding protein_coding MGP_CBAJ_T0058776.1 MGP_CBAJ_G0026550.1 mouse_genomes_project 2 181216531 181222149 + MGP_CBAJ_P0058776 Pigt protein_coding protein_coding MGP_CBAJ_T0058777.1 MGP_CBAJ_G0026550.1 mouse_genomes_project 2 181216542 181222425 + Pigt protein_coding retained_intron MGP_CBAJ_T0058778.1 MGP_CBAJ_G0026550.1 mouse_genomes_project 2 181216557 181227285 + MGP_CBAJ_P0058778 Pigt protein_coding nonsense_mediated_decay MGP_CBAJ_T0058779.1 MGP_CBAJ_G0026550.1 mouse_genomes_project 2 181218911 181220601 + Pigt protein_coding retained_intron MGP_CBAJ_T0003892.1 MGP_CBAJ_G0003472.1 mouse_genomes_project 2 40084545 40099863 + Nr6a1os antisense antisense MGP_CBAJ_T0003893.1 MGP_CBAJ_G0003472.1 mouse_genomes_project 2 40084629 40118594 + Nr6a1os antisense antisense MGP_CBAJ_T0055708.1 MGP_CBAJ_G0025843.1 mouse_genomes_project 2 99004781 99017629 - Nr1h3 protein_coding retained_intron MGP_CBAJ_T0055709.1 MGP_CBAJ_G0025843.1 mouse_genomes_project 2 99004781 99017720 - MGP_CBAJ_P0055709 Nr1h3 protein_coding protein_coding MGP_CBAJ_T0055710.1 MGP_CBAJ_G0025843.1 mouse_genomes_project 2 99004781 99017639 - MGP_CBAJ_P0055710 Nr1h3 protein_coding protein_coding MGP_CBAJ_T0055711.1 MGP_CBAJ_G0025843.1 mouse_genomes_project 2 99004812 99017755 - MGP_CBAJ_P0055711 Nr1h3 protein_coding protein_coding MGP_CBAJ_T0055712.1 MGP_CBAJ_G0025843.1 mouse_genomes_project 2 99004812 99017489 - MGP_CBAJ_P0055712 Nr1h3 protein_coding protein_coding MGP_CBAJ_T0055713.1 MGP_CBAJ_G0025843.1 mouse_genomes_project 2 99004926 99015346 - Nr1h3 protein_coding retained_intron MGP_CBAJ_T0055714.1 MGP_CBAJ_G0025843.1 mouse_genomes_project 2 99010809 99011560 - Nr1h3 protein_coding retained_intron MGP_CBAJ_T0055715.1 MGP_CBAJ_G0025843.1 mouse_genomes_project 2 99014632 99025257 - Nr1h3 protein_coding processed_transcript MGP_CBAJ_T0013261.1 MGP_CBAJ_G0011373.1 mouse_genomes_project 2 16533362 16534513 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013657.1 MGP_CBAJ_G0011769.1 mouse_genomes_project 2 172514298 172514890 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099144.1 MGP_CBAJ_G0037399.1 mouse_genomes_project 2 183954242 183954345 + Gm24477 snRNA snRNA MGP_CBAJ_T0052564.1 MGP_CBAJ_G0025123.1 mouse_genomes_project 2 23942585 24106711 - MGP_CBAJ_P0052564 Cacna1b protein_coding protein_coding MGP_CBAJ_T0052565.1 MGP_CBAJ_G0025123.1 mouse_genomes_project 2 23942592 24106688 - MGP_CBAJ_P0052565 Cacna1b protein_coding protein_coding MGP_CBAJ_T0052566.1 MGP_CBAJ_G0025123.1 mouse_genomes_project 2 23945073 24106606 - MGP_CBAJ_P0052566 Cacna1b protein_coding protein_coding MGP_CBAJ_T0052567.1 MGP_CBAJ_G0025123.1 mouse_genomes_project 2 23945077 23946233 - MGP_CBAJ_P0052567 Cacna1b protein_coding protein_coding MGP_CBAJ_T0052568.1 MGP_CBAJ_G0025123.1 mouse_genomes_project 2 23945268 24106606 - MGP_CBAJ_P0052568 Cacna1b protein_coding protein_coding MGP_CBAJ_T0052569.1 MGP_CBAJ_G0025123.1 mouse_genomes_project 2 23945268 24106606 - MGP_CBAJ_P0052569 Cacna1b protein_coding protein_coding MGP_CBAJ_T0052570.1 MGP_CBAJ_G0025123.1 mouse_genomes_project 2 23946689 23957020 - MGP_CBAJ_P0052570 Cacna1b protein_coding protein_coding MGP_CBAJ_T0052571.1 MGP_CBAJ_G0025123.1 mouse_genomes_project 2 23948630 23975768 - MGP_CBAJ_P0052571 Cacna1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0052572.1 MGP_CBAJ_G0025123.1 mouse_genomes_project 2 23961287 23970803 - MGP_CBAJ_P0052572 Cacna1b protein_coding protein_coding MGP_CBAJ_T0052573.1 MGP_CBAJ_G0025123.1 mouse_genomes_project 2 24018037 24024406 - MGP_CBAJ_P0052573 Cacna1b protein_coding protein_coding MGP_CBAJ_T0010233.1 MGP_CBAJ_G0008371.1 mouse_genomes_project 2 8388609 8388705 + Gm23542 miRNA miRNA MGP_CBAJ_T0057210.1 MGP_CBAJ_G0026180.1 mouse_genomes_project 2 141599654 141609671 - MGP_CBAJ_P0057210 protein_coding protein_coding MGP_CBAJ_T0052534.1 MGP_CBAJ_G0025117.1 mouse_genomes_project 2 23564805 23570061 - MGP_CBAJ_P0052534 protein_coding protein_coding MGP_CBAJ_T0055747.1 MGP_CBAJ_G0025848.1 mouse_genomes_project 2 99113711 99331898 - MGP_CBAJ_P0055747 1110051M20Rik protein_coding protein_coding MGP_CBAJ_T0055748.1 MGP_CBAJ_G0025848.1 mouse_genomes_project 2 99119376 99120776 - 1110051M20Rik protein_coding processed_transcript MGP_CBAJ_T0055749.1 MGP_CBAJ_G0025848.1 mouse_genomes_project 2 99152660 99331927 - 1110051M20Rik protein_coding processed_transcript MGP_CBAJ_T0055750.1 MGP_CBAJ_G0025848.1 mouse_genomes_project 2 99256537 99331953 - 1110051M20Rik protein_coding processed_transcript MGP_CBAJ_T0055751.1 MGP_CBAJ_G0025848.1 mouse_genomes_project 2 99296616 99331921 - 1110051M20Rik protein_coding processed_transcript MGP_CBAJ_T0055752.1 MGP_CBAJ_G0025848.1 mouse_genomes_project 2 99296665 99331988 - 1110051M20Rik protein_coding processed_transcript MGP_CBAJ_T0013310.1 MGP_CBAJ_G0011422.1 mouse_genomes_project 2 36293078 36293558 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0054202.1 MGP_CBAJ_G0025413.1 mouse_genomes_project 2 39554887 39569096 + Lhx2 protein_coding retained_intron MGP_CBAJ_T0054203.1 MGP_CBAJ_G0025413.1 mouse_genomes_project 2 39556495 39570228 + MGP_CBAJ_P0054203 Lhx2 protein_coding protein_coding MGP_CBAJ_T0054204.1 MGP_CBAJ_G0025413.1 mouse_genomes_project 2 39567103 39585177 + MGP_CBAJ_P0054204 Lhx2 protein_coding protein_coding MGP_CBAJ_T0054205.1 MGP_CBAJ_G0025413.1 mouse_genomes_project 2 39567170 39570034 + MGP_CBAJ_P0054205 Lhx2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054206.1 MGP_CBAJ_G0025413.1 mouse_genomes_project 2 39567934 39569976 + MGP_CBAJ_P0054206 Lhx2 protein_coding protein_coding MGP_CBAJ_T0054207.1 MGP_CBAJ_G0025413.1 mouse_genomes_project 2 39569204 39575500 + Lhx2 protein_coding retained_intron MGP_CBAJ_T0058659.1 MGP_CBAJ_G0026511.1 mouse_genomes_project 2 179558178 179606941 + MGP_CBAJ_P0058659 Mybl2 protein_coding protein_coding MGP_CBAJ_T0058660.1 MGP_CBAJ_G0026511.1 mouse_genomes_project 2 179558320 179605955 + MGP_CBAJ_P0058660 Mybl2 protein_coding unknown_likely_coding MGP_CBAJ_T0058661.1 MGP_CBAJ_G0026511.1 mouse_genomes_project 2 179562839 179570712 + Mybl2 protein_coding processed_transcript MGP_CBAJ_T0058662.1 MGP_CBAJ_G0026511.1 mouse_genomes_project 2 179577982 179587030 + Mybl2 protein_coding retained_intron MGP_CBAJ_T0058663.1 MGP_CBAJ_G0026511.1 mouse_genomes_project 2 179588631 179602900 + MGP_CBAJ_P0058663 Mybl2 protein_coding protein_coding MGP_CBAJ_T0058664.1 MGP_CBAJ_G0026511.1 mouse_genomes_project 2 179589039 179600978 + Mybl2 protein_coding retained_intron MGP_CBAJ_T0013298.1 MGP_CBAJ_G0011410.1 mouse_genomes_project 2 29515956 29516247 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010311.1 MGP_CBAJ_G0008449.1 mouse_genomes_project 2 102423502 102423606 - Gm23630 miRNA miRNA MGP_CBAJ_T0007190.1 MGP_CBAJ_G0005891.1 mouse_genomes_project 2 121137163 121143410 - Gm13942 lincRNA lincRNA MGP_CBAJ_T0055356.1 MGP_CBAJ_G0025634.1 mouse_genomes_project 2 91672385 91713037 - MGP_CBAJ_P0055356 Lrrc55 protein_coding protein_coding MGP_CBAJ_T0055357.1 MGP_CBAJ_G0025634.1 mouse_genomes_project 2 91704408 91713037 - MGP_CBAJ_P0055357 Lrrc55 protein_coding protein_coding MGP_CBAJ_T0003990.1 MGP_CBAJ_G0003535.1 mouse_genomes_project 2 129401442 129404687 + 1700054M17Rik antisense antisense MGP_CBAJ_T0057204.1 MGP_CBAJ_G0026176.1 mouse_genomes_project 2 141398878 141436084 + MGP_CBAJ_P0057204 Fbln7 protein_coding protein_coding MGP_CBAJ_T0057205.1 MGP_CBAJ_G0026176.1 mouse_genomes_project 2 141399838 141436080 + MGP_CBAJ_P0057205 Fbln7 protein_coding protein_coding MGP_CBAJ_T0007242.1 MGP_CBAJ_G0005933.1 mouse_genomes_project 2 158260364 158279880 - lincRNA lincRNA MGP_CBAJ_T0007243.1 MGP_CBAJ_G0005933.1 mouse_genomes_project 2 158261529 158269706 - lincRNA lincRNA MGP_CBAJ_T0057184.1 MGP_CBAJ_G0026173.1 mouse_genomes_project 2 141101136 141185408 - MGP_CBAJ_P0057184 Anapc1 protein_coding unknown_likely_coding MGP_CBAJ_T0057185.1 MGP_CBAJ_G0026173.1 mouse_genomes_project 2 141101141 141185393 - MGP_CBAJ_P0057185 Anapc1 protein_coding protein_coding MGP_CBAJ_T0057186.1 MGP_CBAJ_G0026173.1 mouse_genomes_project 2 141106444 141109190 - Anapc1 protein_coding processed_transcript MGP_CBAJ_T0057187.1 MGP_CBAJ_G0026173.1 mouse_genomes_project 2 141108620 141113893 - Anapc1 protein_coding processed_transcript MGP_CBAJ_T0057188.1 MGP_CBAJ_G0026173.1 mouse_genomes_project 2 141113422 141118511 - Anapc1 protein_coding processed_transcript MGP_CBAJ_T0057189.1 MGP_CBAJ_G0026173.1 mouse_genomes_project 2 141114787 141119690 - Anapc1 protein_coding processed_transcript MGP_CBAJ_T0057190.1 MGP_CBAJ_G0026173.1 mouse_genomes_project 2 141119593 141121088 - Anapc1 protein_coding processed_transcript MGP_CBAJ_T0057191.1 MGP_CBAJ_G0026173.1 mouse_genomes_project 2 141133664 141185378 - MGP_CBAJ_P0057191 Anapc1 protein_coding protein_coding MGP_CBAJ_T0057192.1 MGP_CBAJ_G0026173.1 mouse_genomes_project 2 141151109 141156538 - Anapc1 protein_coding processed_transcript MGP_CBAJ_T0057193.1 MGP_CBAJ_G0026173.1 mouse_genomes_project 2 141152955 141157386 - Anapc1 protein_coding processed_transcript MGP_CBAJ_T0057194.1 MGP_CBAJ_G0026173.1 mouse_genomes_project 2 141176678 141185377 - Anapc1 protein_coding processed_transcript MGP_CBAJ_T0057195.1 MGP_CBAJ_G0026173.1 mouse_genomes_project 2 141183054 141185356 - MGP_CBAJ_P0057195 Anapc1 protein_coding protein_coding MGP_CBAJ_T0011378.1 MGP_CBAJ_G0009516.1 mouse_genomes_project 2 114600170 114600430 - Gm27715 misc_RNA misc_RNA MGP_CBAJ_T0058592.1 MGP_CBAJ_G0026499.1 mouse_genomes_project 2 176875383 176962670 + MGP_CBAJ_P0058592 Top1 protein_coding protein_coding MGP_CBAJ_T0058593.1 MGP_CBAJ_G0026499.1 mouse_genomes_project 2 176875475 176879603 + Top1 protein_coding processed_transcript MGP_CBAJ_T0058594.1 MGP_CBAJ_G0026499.1 mouse_genomes_project 2 176902827 176922007 + Top1 protein_coding retained_intron MGP_CBAJ_T0058595.1 MGP_CBAJ_G0026499.1 mouse_genomes_project 2 176922724 176930644 + Top1 protein_coding retained_intron MGP_CBAJ_T0058596.1 MGP_CBAJ_G0026499.1 mouse_genomes_project 2 176940652 176942189 + Top1 protein_coding processed_transcript MGP_CBAJ_T0058597.1 MGP_CBAJ_G0026499.1 mouse_genomes_project 2 176957392 176961290 + Top1 protein_coding retained_intron MGP_CBAJ_T0056543.1 MGP_CBAJ_G0026044.1 mouse_genomes_project 2 130904102 130911649 - MGP_CBAJ_P0056543 Ndufaf1 protein_coding protein_coding MGP_CBAJ_T0056544.1 MGP_CBAJ_G0026044.1 mouse_genomes_project 2 130911323 130913363 - Ndufaf1 protein_coding processed_transcript MGP_CBAJ_T0056545.1 MGP_CBAJ_G0026044.1 mouse_genomes_project 2 130911503 130913378 - Ndufaf1 protein_coding processed_transcript MGP_CBAJ_T0051943.1 MGP_CBAJ_G0025016.1 mouse_genomes_project 2 310650 314345 - MGP_CBAJ_P0051943 Rpp38 protein_coding protein_coding MGP_CBAJ_T0056216.1 MGP_CBAJ_G0025936.1 mouse_genomes_project 2 119023978 119243841 - MGP_CBAJ_P0056216 Mettl15 protein_coding protein_coding MGP_CBAJ_T0056217.1 MGP_CBAJ_G0025936.1 mouse_genomes_project 2 119023981 119243831 - Mettl15 protein_coding processed_transcript MGP_CBAJ_T0056218.1 MGP_CBAJ_G0025936.1 mouse_genomes_project 2 119059254 119246299 - MGP_CBAJ_P0056218 Mettl15 protein_coding protein_coding MGP_CBAJ_T0056219.1 MGP_CBAJ_G0025936.1 mouse_genomes_project 2 119197713 119246277 - Mettl15 protein_coding retained_intron MGP_CBAJ_T0056220.1 MGP_CBAJ_G0025936.1 mouse_genomes_project 2 119197778 119246253 - Mettl15 protein_coding processed_transcript MGP_CBAJ_T0013568.1 MGP_CBAJ_G0011680.1 mouse_genomes_project 2 140087897 140089741 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0058788.1 MGP_CBAJ_G0026555.1 mouse_genomes_project 2 181332661 181360733 - MGP_CBAJ_P0058788 Wfdc8 protein_coding protein_coding MGP_CBAJ_T0058789.1 MGP_CBAJ_G0026555.1 mouse_genomes_project 2 181332669 181359735 - MGP_CBAJ_P0058789 Wfdc8 protein_coding protein_coding MGP_CBAJ_T0058790.1 MGP_CBAJ_G0026555.1 mouse_genomes_project 2 181333415 181360733 - MGP_CBAJ_P0058790 Wfdc8 protein_coding protein_coding MGP_CBAJ_T0017594.1 MGP_CBAJ_G0015205.1 mouse_genomes_project 2 132223957 132242273 + AV039307 processed_transcript processed_transcript MGP_CBAJ_T0017595.1 MGP_CBAJ_G0015205.1 mouse_genomes_project 2 132223969 132242407 + AV039307 processed_transcript processed_transcript MGP_CBAJ_T0017596.1 MGP_CBAJ_G0015205.1 mouse_genomes_project 2 132241950 132242274 + AV039307 processed_transcript processed_transcript MGP_CBAJ_T0058634.1 MGP_CBAJ_G0026505.1 mouse_genomes_project 2 177883340 179107853 - MGP_CBAJ_P0058634 Ptprt protein_coding protein_coding MGP_CBAJ_T0058635.1 MGP_CBAJ_G0026505.1 mouse_genomes_project 2 177883340 179107853 - MGP_CBAJ_P0058635 Ptprt protein_coding protein_coding MGP_CBAJ_T0058636.1 MGP_CBAJ_G0026505.1 mouse_genomes_project 2 177887683 179107800 - MGP_CBAJ_P0058636 Ptprt protein_coding protein_coding MGP_CBAJ_T0058637.1 MGP_CBAJ_G0026505.1 mouse_genomes_project 2 177888834 179107853 - MGP_CBAJ_P0058637 Ptprt protein_coding protein_coding MGP_CBAJ_T0058638.1 MGP_CBAJ_G0026505.1 mouse_genomes_project 2 178076941 178187819 - Ptprt protein_coding processed_transcript MGP_CBAJ_T0058639.1 MGP_CBAJ_G0026505.1 mouse_genomes_project 2 178422413 178547590 - Ptprt protein_coding processed_transcript MGP_CBAJ_T0058711.1 MGP_CBAJ_G0026524.1 mouse_genomes_project 2 180397589 180405748 + Wisp2 protein_coding processed_transcript MGP_CBAJ_T0058712.1 MGP_CBAJ_G0026524.1 mouse_genomes_project 2 180397617 180409920 + MGP_CBAJ_P0058712 Wisp2 protein_coding protein_coding MGP_CBAJ_T0017618.1 MGP_CBAJ_G0015214.1 mouse_genomes_project 2 143253124 143275911 - 4930473A02Rik processed_transcript processed_transcript MGP_CBAJ_T0054020.1 MGP_CBAJ_G0025359.1 mouse_genomes_project 2 35904168 35990666 - MGP_CBAJ_P0054020 Hc protein_coding protein_coding MGP_CBAJ_T0054021.1 MGP_CBAJ_G0025359.1 mouse_genomes_project 2 35904540 35943957 - MGP_CBAJ_P0054021 Hc protein_coding protein_coding MGP_CBAJ_T0054022.1 MGP_CBAJ_G0025359.1 mouse_genomes_project 2 35915515 35917620 - Hc protein_coding processed_transcript MGP_CBAJ_T0054023.1 MGP_CBAJ_G0025359.1 mouse_genomes_project 2 35915609 35925158 - Hc protein_coding retained_intron MGP_CBAJ_T0054024.1 MGP_CBAJ_G0025359.1 mouse_genomes_project 2 35919243 35930639 - Hc protein_coding processed_transcript MGP_CBAJ_T0052812.1 MGP_CBAJ_G0025163.1 mouse_genomes_project 2 24967280 24974289 - MGP_CBAJ_P0052812 C8g protein_coding protein_coding MGP_CBAJ_T0052813.1 MGP_CBAJ_G0025163.1 mouse_genomes_project 2 24967280 24969243 - MGP_CBAJ_P0052813 C8g protein_coding protein_coding MGP_CBAJ_T0052814.1 MGP_CBAJ_G0025163.1 mouse_genomes_project 2 24967285 24968885 - C8g protein_coding processed_transcript MGP_CBAJ_T0052815.1 MGP_CBAJ_G0025163.1 mouse_genomes_project 2 24967285 24968132 - C8g protein_coding processed_transcript MGP_CBAJ_T0052816.1 MGP_CBAJ_G0025163.1 mouse_genomes_project 2 24967285 24968865 - C8g protein_coding processed_transcript MGP_CBAJ_T0052817.1 MGP_CBAJ_G0025163.1 mouse_genomes_project 2 24967287 24968873 - C8g protein_coding processed_transcript MGP_CBAJ_T0052818.1 MGP_CBAJ_G0025163.1 mouse_genomes_project 2 24967526 24968744 - C8g protein_coding processed_transcript MGP_CBAJ_T0057976.1 MGP_CBAJ_G0026378.1 mouse_genomes_project 2 168078039 168088438 - MGP_CBAJ_P0057976 Dusp15 protein_coding protein_coding MGP_CBAJ_T0057977.1 MGP_CBAJ_G0026378.1 mouse_genomes_project 2 168078064 168081599 - Dusp15 protein_coding retained_intron MGP_CBAJ_T0057978.1 MGP_CBAJ_G0026378.1 mouse_genomes_project 2 168081975 168088564 - MGP_CBAJ_P0057978 Dusp15 protein_coding protein_coding MGP_CBAJ_T0057979.1 MGP_CBAJ_G0026378.1 mouse_genomes_project 2 168082019 168088680 - MGP_CBAJ_P0057979 Dusp15 protein_coding protein_coding MGP_CBAJ_T0100424.1 MGP_CBAJ_G0038679.1 mouse_genomes_project 2 184307306 184307396 + Snord12 snoRNA snoRNA MGP_CBAJ_T0055307.1 MGP_CBAJ_G0025622.1 mouse_genomes_project 2 91296336 91307920 + MGP_CBAJ_P0055307 Ube2l6 protein_coding protein_coding MGP_CBAJ_T0055308.1 MGP_CBAJ_G0025622.1 mouse_genomes_project 2 91296342 91304261 + MGP_CBAJ_P0055308 Ube2l6 protein_coding protein_coding MGP_CBAJ_T0055309.1 MGP_CBAJ_G0025622.1 mouse_genomes_project 2 91300569 91308077 + Ube2l6 protein_coding processed_transcript MGP_CBAJ_T0055310.1 MGP_CBAJ_G0025622.1 mouse_genomes_project 2 91304098 91307039 + Ube2l6 protein_coding retained_intron MGP_CBAJ_T0099096.1 MGP_CBAJ_G0037351.1 mouse_genomes_project 2 28489983 28490087 + Gm22675 snRNA snRNA MGP_CBAJ_T0057785.1 MGP_CBAJ_G0026314.1 mouse_genomes_project 2 163374351 163378415 + MGP_CBAJ_P0057785 Cst12 protein_coding protein_coding MGP_CBAJ_T0057786.1 MGP_CBAJ_G0026314.1 mouse_genomes_project 2 163374362 163378524 + MGP_CBAJ_P0057786 Cst12 protein_coding protein_coding MGP_CBAJ_T0013340.1 MGP_CBAJ_G0011452.1 mouse_genomes_project 2 47837799 47838212 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055488.1 MGP_CBAJ_G0025752.1 mouse_genomes_project 2 95317869 95318976 - MGP_CBAJ_P0055488 Olfr1167 protein_coding protein_coding MGP_CBAJ_T0054702.1 MGP_CBAJ_G0025494.1 mouse_genomes_project 2 70385309 70429454 - MGP_CBAJ_P0054702 Galnt3 protein_coding protein_coding MGP_CBAJ_T0054703.1 MGP_CBAJ_G0025494.1 mouse_genomes_project 2 70386629 70397642 - Galnt3 protein_coding processed_transcript MGP_CBAJ_T0054704.1 MGP_CBAJ_G0025494.1 mouse_genomes_project 2 70393580 70396497 - Galnt3 protein_coding processed_transcript MGP_CBAJ_T0013471.1 MGP_CBAJ_G0011583.1 mouse_genomes_project 2 94415370 94416536 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0056919.1 MGP_CBAJ_G0026110.1 mouse_genomes_project 2 133920533 133925193 - MGP_CBAJ_P0056919 Duoxa1 protein_coding protein_coding MGP_CBAJ_T0056920.1 MGP_CBAJ_G0026110.1 mouse_genomes_project 2 133921893 133931929 - MGP_CBAJ_P0056920 Duoxa1 protein_coding protein_coding MGP_CBAJ_T0056921.1 MGP_CBAJ_G0026110.1 mouse_genomes_project 2 133921896 133924056 - Duoxa1 protein_coding processed_transcript MGP_CBAJ_T0056922.1 MGP_CBAJ_G0026110.1 mouse_genomes_project 2 133922089 133925171 - MGP_CBAJ_P0056922 Duoxa1 protein_coding protein_coding MGP_CBAJ_T0056923.1 MGP_CBAJ_G0026110.1 mouse_genomes_project 2 133923113 133931966 - MGP_CBAJ_P0056923 Duoxa1 protein_coding protein_coding MGP_CBAJ_T0056924.1 MGP_CBAJ_G0026110.1 mouse_genomes_project 2 133923559 133931880 - MGP_CBAJ_P0056924 Duoxa1 protein_coding protein_coding MGP_CBAJ_T0056925.1 MGP_CBAJ_G0026110.1 mouse_genomes_project 2 133923938 133931887 - MGP_CBAJ_P0056925 Duoxa1 protein_coding protein_coding MGP_CBAJ_T0056419.1 MGP_CBAJ_G0026012.1 mouse_genomes_project 2 129650259 129672196 - MGP_CBAJ_P0056419 Bmf protein_coding protein_coding MGP_CBAJ_T0056420.1 MGP_CBAJ_G0026012.1 mouse_genomes_project 2 129651734 129670065 - MGP_CBAJ_P0056420 Bmf protein_coding protein_coding MGP_CBAJ_T0056421.1 MGP_CBAJ_G0026012.1 mouse_genomes_project 2 129653471 129667111 - Bmf protein_coding processed_transcript MGP_CBAJ_T0056422.1 MGP_CBAJ_G0026012.1 mouse_genomes_project 2 129653552 129667840 - Bmf protein_coding processed_transcript MGP_CBAJ_T0056423.1 MGP_CBAJ_G0026012.1 mouse_genomes_project 2 129653919 129672171 - Bmf protein_coding processed_transcript MGP_CBAJ_T0056424.1 MGP_CBAJ_G0026012.1 mouse_genomes_project 2 129667707 129669551 - Bmf protein_coding processed_transcript MGP_CBAJ_T0056425.1 MGP_CBAJ_G0026012.1 mouse_genomes_project 2 129667759 129670105 - Bmf protein_coding processed_transcript MGP_CBAJ_T0056426.1 MGP_CBAJ_G0026012.1 mouse_genomes_project 2 129669432 129672184 - Bmf protein_coding processed_transcript MGP_CBAJ_T0055231.1 MGP_CBAJ_G0025605.1 mouse_genomes_project 2 90133690 90169885 + Itgav protein_coding retained_intron MGP_CBAJ_T0055232.1 MGP_CBAJ_G0025605.1 mouse_genomes_project 2 90133690 90228262 + MGP_CBAJ_P0055232 Itgav protein_coding protein_coding MGP_CBAJ_T0055233.1 MGP_CBAJ_G0025605.1 mouse_genomes_project 2 90133745 90161034 + MGP_CBAJ_P0055233 Itgav protein_coding protein_coding MGP_CBAJ_T0055234.1 MGP_CBAJ_G0025605.1 mouse_genomes_project 2 90133750 90150029 + Itgav protein_coding processed_transcript MGP_CBAJ_T0055235.1 MGP_CBAJ_G0025605.1 mouse_genomes_project 2 90133759 90161462 + Itgav protein_coding retained_intron MGP_CBAJ_T0055236.1 MGP_CBAJ_G0025605.1 mouse_genomes_project 2 90133820 90135081 + Itgav protein_coding processed_transcript MGP_CBAJ_T0055237.1 MGP_CBAJ_G0025605.1 mouse_genomes_project 2 90133848 90228262 + MGP_CBAJ_P0055237 Itgav protein_coding protein_coding MGP_CBAJ_T0055238.1 MGP_CBAJ_G0025605.1 mouse_genomes_project 2 90223196 90225332 + MGP_CBAJ_P0055238 Itgav protein_coding protein_coding MGP_CBAJ_T0055239.1 MGP_CBAJ_G0025605.1 mouse_genomes_project 2 90224267 90228262 + MGP_CBAJ_P0055239 Itgav protein_coding protein_coding MGP_CBAJ_T0057361.1 MGP_CBAJ_G0026217.1 mouse_genomes_project 2 143836181 143839638 - MGP_CBAJ_P0057361 Gfra4 protein_coding protein_coding MGP_CBAJ_T0057362.1 MGP_CBAJ_G0026217.1 mouse_genomes_project 2 143836188 143838007 - Gfra4 protein_coding retained_intron MGP_CBAJ_T0057363.1 MGP_CBAJ_G0026217.1 mouse_genomes_project 2 143836189 143838061 - Gfra4 protein_coding retained_intron MGP_CBAJ_T0057364.1 MGP_CBAJ_G0026217.1 mouse_genomes_project 2 143836725 143839232 - MGP_CBAJ_P0057364 Gfra4 protein_coding protein_coding MGP_CBAJ_T0057365.1 MGP_CBAJ_G0026217.1 mouse_genomes_project 2 143836757 143839638 - MGP_CBAJ_P0057365 Gfra4 protein_coding protein_coding MGP_CBAJ_T0057366.1 MGP_CBAJ_G0026217.1 mouse_genomes_project 2 143836757 143839232 - MGP_CBAJ_P0057366 Gfra4 protein_coding protein_coding MGP_CBAJ_T0057367.1 MGP_CBAJ_G0026217.1 mouse_genomes_project 2 143837781 143839638 - MGP_CBAJ_P0057367 Gfra4 protein_coding protein_coding MGP_CBAJ_T0057368.1 MGP_CBAJ_G0026217.1 mouse_genomes_project 2 143837781 143839232 - MGP_CBAJ_P0057368 Gfra4 protein_coding protein_coding MGP_CBAJ_T0055574.1 MGP_CBAJ_G0025818.1 mouse_genomes_project 2 97634337 97637712 + MGP_CBAJ_P0055574 Olfr1263 protein_coding protein_coding MGP_CBAJ_T0013422.1 MGP_CBAJ_G0011534.1 mouse_genomes_project 2 78346411 78347210 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0054915.1 MGP_CBAJ_G0025538.1 mouse_genomes_project 2 76546620 76549967 - MGP_CBAJ_P0054915 Dlx2 protein_coding protein_coding MGP_CBAJ_T0054916.1 MGP_CBAJ_G0025538.1 mouse_genomes_project 2 76548078 76549163 - Dlx2 protein_coding retained_intron MGP_CBAJ_T0001001.1 MGP_CBAJ_G0000933.1 mouse_genomes_project 2 10540831 10543443 - TEC TEC MGP_CBAJ_T0054131.1 MGP_CBAJ_G0025386.1 mouse_genomes_project 2 37860208 37861147 + MGP_CBAJ_P0054131 Olfr50 protein_coding protein_coding MGP_CBAJ_T0055554.1 MGP_CBAJ_G0025806.1 mouse_genomes_project 2 97273684 97277171 - MGP_CBAJ_P0055554 Olfr1251 protein_coding protein_coding MGP_CBAJ_T0003999.1 MGP_CBAJ_G0003544.1 mouse_genomes_project 2 137363678 137366300 + A530010F05Rik antisense antisense MGP_CBAJ_T0054537.1 MGP_CBAJ_G0025470.1 mouse_genomes_project 2 63541286 63659106 - MGP_CBAJ_P0054537 Baz2b protein_coding unknown_likely_coding MGP_CBAJ_T0054538.1 MGP_CBAJ_G0025470.1 mouse_genomes_project 2 63541290 63790887 - MGP_CBAJ_P0054538 Baz2b protein_coding protein_coding MGP_CBAJ_T0054539.1 MGP_CBAJ_G0025470.1 mouse_genomes_project 2 63541372 63655758 - MGP_CBAJ_P0054539 Baz2b protein_coding protein_coding MGP_CBAJ_T0054540.1 MGP_CBAJ_G0025470.1 mouse_genomes_project 2 63545112 63554464 - MGP_CBAJ_P0054540 Baz2b protein_coding protein_coding MGP_CBAJ_T0054541.1 MGP_CBAJ_G0025470.1 mouse_genomes_project 2 63556107 63565859 - Baz2b protein_coding processed_transcript MGP_CBAJ_T0054542.1 MGP_CBAJ_G0025470.1 mouse_genomes_project 2 63558837 63562478 - Baz2b protein_coding processed_transcript MGP_CBAJ_T0054543.1 MGP_CBAJ_G0025470.1 mouse_genomes_project 2 63566648 63592086 - MGP_CBAJ_P0054543 Baz2b protein_coding protein_coding MGP_CBAJ_T0054544.1 MGP_CBAJ_G0025470.1 mouse_genomes_project 2 63597331 63603912 - Baz2b protein_coding processed_transcript MGP_CBAJ_T0054545.1 MGP_CBAJ_G0025470.1 mouse_genomes_project 2 63623708 63790930 - Baz2b protein_coding processed_transcript MGP_CBAJ_T0054546.1 MGP_CBAJ_G0025470.1 mouse_genomes_project 2 63633633 63750598 - Baz2b protein_coding processed_transcript MGP_CBAJ_T0054547.1 MGP_CBAJ_G0025470.1 mouse_genomes_project 2 63654119 63790782 - Baz2b protein_coding processed_transcript MGP_CBAJ_T0054548.1 MGP_CBAJ_G0025470.1 mouse_genomes_project 2 63737331 63896320 - Baz2b protein_coding processed_transcript MGP_CBAJ_T0054549.1 MGP_CBAJ_G0025470.1 mouse_genomes_project 2 63892695 63896282 - Baz2b protein_coding processed_transcript MGP_CBAJ_T0054550.1 MGP_CBAJ_G0025470.1 mouse_genomes_project 2 63893162 63895640 - Baz2b protein_coding processed_transcript MGP_CBAJ_T0054551.1 MGP_CBAJ_G0025470.1 mouse_genomes_project 2 63893163 63896229 - Baz2b protein_coding processed_transcript MGP_CBAJ_T0056916.1 MGP_CBAJ_G0026108.1 mouse_genomes_project 2 133885336 133916571 - MGP_CBAJ_P0056916 Duox2 protein_coding protein_coding MGP_CBAJ_T0056917.1 MGP_CBAJ_G0026108.1 mouse_genomes_project 2 133888791 133891673 - Duox2 protein_coding processed_transcript MGP_CBAJ_T0055597.1 MGP_CBAJ_G0025830.1 mouse_genomes_project 2 98499989 98542916 + MGP_CBAJ_P0055597 Fnbp4 protein_coding protein_coding MGP_CBAJ_T0055598.1 MGP_CBAJ_G0025830.1 mouse_genomes_project 2 98500223 98535840 + Fnbp4 protein_coding processed_transcript MGP_CBAJ_T0055599.1 MGP_CBAJ_G0025830.1 mouse_genomes_project 2 98506888 98516830 + Fnbp4 protein_coding processed_transcript MGP_CBAJ_T0055600.1 MGP_CBAJ_G0025830.1 mouse_genomes_project 2 98516979 98523137 + Fnbp4 protein_coding processed_transcript MGP_CBAJ_T0055601.1 MGP_CBAJ_G0025830.1 mouse_genomes_project 2 98517782 98527209 + Fnbp4 protein_coding processed_transcript MGP_CBAJ_T0055602.1 MGP_CBAJ_G0025830.1 mouse_genomes_project 2 98522824 98527430 + Fnbp4 protein_coding processed_transcript MGP_CBAJ_T0055603.1 MGP_CBAJ_G0025830.1 mouse_genomes_project 2 98527458 98535734 + Fnbp4 protein_coding processed_transcript MGP_CBAJ_T0055604.1 MGP_CBAJ_G0025830.1 mouse_genomes_project 2 98528015 98535823 + Fnbp4 protein_coding processed_transcript MGP_CBAJ_T0055605.1 MGP_CBAJ_G0025830.1 mouse_genomes_project 2 98534907 98535731 + Fnbp4 protein_coding processed_transcript MGP_CBAJ_T0098018.1 MGP_CBAJ_G0036291.1 mouse_genomes_project 2 113624170 113624283 + Gm25554 rRNA rRNA MGP_CBAJ_T0058180.1 MGP_CBAJ_G0026429.1 mouse_genomes_project 2 170900063 170956214 - MGP_CBAJ_P0058180 Ncoa6 protein_coding protein_coding MGP_CBAJ_T0058181.1 MGP_CBAJ_G0026429.1 mouse_genomes_project 2 170900072 170995753 - MGP_CBAJ_P0058181 Ncoa6 protein_coding protein_coding MGP_CBAJ_T0058182.1 MGP_CBAJ_G0026429.1 mouse_genomes_project 2 170900076 170910020 - Ncoa6 protein_coding retained_intron MGP_CBAJ_T0058183.1 MGP_CBAJ_G0026429.1 mouse_genomes_project 2 170900076 170916541 - Ncoa6 protein_coding retained_intron MGP_CBAJ_T0058184.1 MGP_CBAJ_G0026429.1 mouse_genomes_project 2 170919814 170995841 - MGP_CBAJ_P0058184 Ncoa6 protein_coding protein_coding MGP_CBAJ_T0058185.1 MGP_CBAJ_G0026429.1 mouse_genomes_project 2 170930625 170934142 - Ncoa6 protein_coding processed_transcript MGP_CBAJ_T0058186.1 MGP_CBAJ_G0026429.1 mouse_genomes_project 2 170935514 170956216 - MGP_CBAJ_P0058186 Ncoa6 protein_coding protein_coding MGP_CBAJ_T0058187.1 MGP_CBAJ_G0026429.1 mouse_genomes_project 2 170953444 170995771 - Ncoa6 protein_coding processed_transcript MGP_CBAJ_T0004051.1 MGP_CBAJ_G0003580.1 mouse_genomes_project 2 166906414 166909794 - Gm14154 antisense antisense MGP_CBAJ_T0057762.1 MGP_CBAJ_G0026303.1 mouse_genomes_project 2 161773862 161779829 + MGP_CBAJ_P0057762 Pax1 protein_coding protein_coding MGP_CBAJ_T0057763.1 MGP_CBAJ_G0026303.1 mouse_genomes_project 2 161776944 161786299 + MGP_CBAJ_P0057763 Pax1 protein_coding protein_coding MGP_CBAJ_T0057764.1 MGP_CBAJ_G0026303.1 mouse_genomes_project 2 161780231 161804581 + Pax1 protein_coding retained_intron MGP_CBAJ_T0055486.1 MGP_CBAJ_G0025750.1 mouse_genomes_project 2 95195657 95196608 - MGP_CBAJ_P0055486 Olfr1163 protein_coding protein_coding MGP_CBAJ_T0007057.1 MGP_CBAJ_G0005783.1 mouse_genomes_project 2 24769776 24774691 - AA543186 lincRNA lincRNA MGP_CBAJ_T0055481.1 MGP_CBAJ_G0025746.1 mouse_genomes_project 2 95130978 95132325 - MGP_CBAJ_P0055481 protein_coding protein_coding MGP_CBAJ_T0013545.1 MGP_CBAJ_G0011657.1 mouse_genomes_project 2 122435319 122462763 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007211.1 MGP_CBAJ_G0005907.1 mouse_genomes_project 2 129361728 129367682 - A930104D05Rik lincRNA lincRNA MGP_CBAJ_T0007212.1 MGP_CBAJ_G0005907.1 mouse_genomes_project 2 129364518 129367514 - A930104D05Rik lincRNA lincRNA MGP_CBAJ_T0053958.1 MGP_CBAJ_G0025351.1 mouse_genomes_project 2 35566072 35662026 - MGP_CBAJ_P0053958 Gapvd1 protein_coding protein_coding MGP_CBAJ_T0053959.1 MGP_CBAJ_G0025351.1 mouse_genomes_project 2 35567647 35661298 - MGP_CBAJ_P0053959 Gapvd1 protein_coding protein_coding MGP_CBAJ_T0053960.1 MGP_CBAJ_G0025351.1 mouse_genomes_project 2 35568455 35661394 - MGP_CBAJ_P0053960 Gapvd1 protein_coding protein_coding MGP_CBAJ_T0053961.1 MGP_CBAJ_G0025351.1 mouse_genomes_project 2 35568455 35661394 - MGP_CBAJ_P0053961 Gapvd1 protein_coding protein_coding MGP_CBAJ_T0053962.1 MGP_CBAJ_G0025351.1 mouse_genomes_project 2 35568953 35600126 - MGP_CBAJ_P0053962 Gapvd1 protein_coding protein_coding MGP_CBAJ_T0053963.1 MGP_CBAJ_G0025351.1 mouse_genomes_project 2 35569364 35575986 - MGP_CBAJ_P0053963 Gapvd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053964.1 MGP_CBAJ_G0025351.1 mouse_genomes_project 2 35586779 35600386 - Gapvd1 protein_coding processed_transcript MGP_CBAJ_T0053965.1 MGP_CBAJ_G0025351.1 mouse_genomes_project 2 35590368 35596855 - Gapvd1 protein_coding retained_intron MGP_CBAJ_T0053966.1 MGP_CBAJ_G0025351.1 mouse_genomes_project 2 35595625 35629376 - MGP_CBAJ_P0053966 Gapvd1 protein_coding protein_coding MGP_CBAJ_T0053967.1 MGP_CBAJ_G0025351.1 mouse_genomes_project 2 35595646 35629279 - MGP_CBAJ_P0053967 Gapvd1 protein_coding protein_coding MGP_CBAJ_T0053968.1 MGP_CBAJ_G0025351.1 mouse_genomes_project 2 35600042 35607958 - MGP_CBAJ_P0053968 Gapvd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053969.1 MGP_CBAJ_G0025351.1 mouse_genomes_project 2 35600086 35608073 - Gapvd1 protein_coding processed_transcript MGP_CBAJ_T0053970.1 MGP_CBAJ_G0025351.1 mouse_genomes_project 2 35604967 35608469 - Gapvd1 protein_coding retained_intron MGP_CBAJ_T0053971.1 MGP_CBAJ_G0025351.1 mouse_genomes_project 2 35626746 35661258 - Gapvd1 protein_coding retained_intron MGP_CBAJ_T0053972.1 MGP_CBAJ_G0025351.1 mouse_genomes_project 2 35629349 35661244 - MGP_CBAJ_P0053972 Gapvd1 protein_coding protein_coding MGP_CBAJ_T0054232.1 MGP_CBAJ_G0025420.1 mouse_genomes_project 2 40300333 40304377 - MGP_CBAJ_P0054232 Rpl35 protein_coding protein_coding MGP_CBAJ_T0054233.1 MGP_CBAJ_G0025420.1 mouse_genomes_project 2 40300372 40303796 - Rpl35 protein_coding processed_transcript MGP_CBAJ_T0054234.1 MGP_CBAJ_G0025420.1 mouse_genomes_project 2 40303364 40303875 - Rpl35 protein_coding processed_transcript MGP_CBAJ_T0013683.1 MGP_CBAJ_G0011795.1 mouse_genomes_project 2 184341963 184342161 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0058035.1 MGP_CBAJ_G0026391.1 mouse_genomes_project 2 168744558 168747766 + MGP_CBAJ_P0058035 4930404H24Rik protein_coding protein_coding MGP_CBAJ_T0013470.1 MGP_CBAJ_G0011582.1 mouse_genomes_project 2 94338064 94338260 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0059150.1 MGP_CBAJ_G0026632.1 mouse_genomes_project 2 188521068 188543594 - MGP_CBAJ_P0059150 4930470P17Rik protein_coding protein_coding MGP_CBAJ_T0055050.1 MGP_CBAJ_G0025568.1 mouse_genomes_project 2 80226303 80282524 + MGP_CBAJ_P0055050 Mtx2 protein_coding protein_coding MGP_CBAJ_T0055051.1 MGP_CBAJ_G0025568.1 mouse_genomes_project 2 80226330 80272868 + Mtx2 protein_coding retained_intron MGP_CBAJ_T0055052.1 MGP_CBAJ_G0025568.1 mouse_genomes_project 2 80273034 80280597 + Mtx2 protein_coding retained_intron MGP_CBAJ_T0057293.1 MGP_CBAJ_G0026201.1 mouse_genomes_project 2 143105818 143106630 + MGP_CBAJ_P0057293 1700020A23Rik protein_coding protein_coding MGP_CBAJ_T0057294.1 MGP_CBAJ_G0026201.1 mouse_genomes_project 2 143105824 143106578 + MGP_CBAJ_P0057294 1700020A23Rik protein_coding protein_coding MGP_CBAJ_T0057295.1 MGP_CBAJ_G0026201.1 mouse_genomes_project 2 143105845 143106634 + MGP_CBAJ_P0057295 1700020A23Rik protein_coding protein_coding MGP_CBAJ_T0007184.1 MGP_CBAJ_G0005885.1 mouse_genomes_project 2 115213224 115216055 - Paupar lincRNA lincRNA MGP_CBAJ_T0003874.1 MGP_CBAJ_G0003457.1 mouse_genomes_project 2 32532848 32533549 - Gm13609 antisense antisense MGP_CBAJ_T0001010.1 MGP_CBAJ_G0000942.1 mouse_genomes_project 2 12363464 12366059 - TEC TEC MGP_CBAJ_T0056656.1 MGP_CBAJ_G0026063.1 mouse_genomes_project 2 131795410 131854499 + Capn3 protein_coding processed_transcript MGP_CBAJ_T0056657.1 MGP_CBAJ_G0026063.1 mouse_genomes_project 2 131795410 131854359 + Capn3 protein_coding processed_transcript MGP_CBAJ_T0056658.1 MGP_CBAJ_G0026063.1 mouse_genomes_project 2 131805171 131854499 + MGP_CBAJ_P0056658 Capn3 protein_coding protein_coding MGP_CBAJ_T0056659.1 MGP_CBAJ_G0026063.1 mouse_genomes_project 2 131805171 131854499 + MGP_CBAJ_P0056659 Capn3 protein_coding protein_coding MGP_CBAJ_T0056660.1 MGP_CBAJ_G0026063.1 mouse_genomes_project 2 131805465 131854085 + MGP_CBAJ_P0056660 Capn3 protein_coding unknown_likely_coding MGP_CBAJ_T0056661.1 MGP_CBAJ_G0026063.1 mouse_genomes_project 2 131818616 131854499 + MGP_CBAJ_P0056661 Capn3 protein_coding protein_coding MGP_CBAJ_T0056662.1 MGP_CBAJ_G0026063.1 mouse_genomes_project 2 131818618 131854499 + MGP_CBAJ_P0056662 Capn3 protein_coding protein_coding MGP_CBAJ_T0056663.1 MGP_CBAJ_G0026063.1 mouse_genomes_project 2 131818668 131854499 + MGP_CBAJ_P0056663 Capn3 protein_coding protein_coding MGP_CBAJ_T0056664.1 MGP_CBAJ_G0026063.1 mouse_genomes_project 2 131818674 131854100 + Capn3 protein_coding processed_transcript MGP_CBAJ_T0056665.1 MGP_CBAJ_G0026063.1 mouse_genomes_project 2 131818674 131854499 + MGP_CBAJ_P0056665 Capn3 protein_coding protein_coding MGP_CBAJ_T0056666.1 MGP_CBAJ_G0026063.1 mouse_genomes_project 2 131831861 131832136 + Capn3 protein_coding processed_transcript MGP_CBAJ_T0056667.1 MGP_CBAJ_G0026063.1 mouse_genomes_project 2 131849834 131852803 + Capn3 protein_coding processed_transcript MGP_CBAJ_T0056668.1 MGP_CBAJ_G0026063.1 mouse_genomes_project 2 131850818 131852628 + Capn3 protein_coding processed_transcript MGP_CBAJ_T0056669.1 MGP_CBAJ_G0026063.1 mouse_genomes_project 2 131850892 131852981 + Capn3 protein_coding processed_transcript MGP_CBAJ_T0011398.1 MGP_CBAJ_G0009536.1 mouse_genomes_project 2 192757404 192757526 + Gm27869 misc_RNA misc_RNA MGP_CBAJ_T0007287.1 MGP_CBAJ_G0005969.1 mouse_genomes_project 2 182532726 182533051 - Gm28163 lincRNA lincRNA MGP_CBAJ_T0054452.1 MGP_CBAJ_G0025454.1 mouse_genomes_project 2 58658503 58856654 + MGP_CBAJ_P0054452 Kcnj3 protein_coding protein_coding MGP_CBAJ_T0054453.1 MGP_CBAJ_G0025454.1 mouse_genomes_project 2 58659689 58854037 + MGP_CBAJ_P0054453 Kcnj3 protein_coding protein_coding MGP_CBAJ_T0054454.1 MGP_CBAJ_G0025454.1 mouse_genomes_project 2 58659698 58856648 + MGP_CBAJ_P0054454 Kcnj3 protein_coding protein_coding MGP_CBAJ_T0055209.1 MGP_CBAJ_G0025599.1 mouse_genomes_project 2 86638293 86657014 + MGP_CBAJ_P0055209 Dusp19 protein_coding protein_coding MGP_CBAJ_T0055210.1 MGP_CBAJ_G0025599.1 mouse_genomes_project 2 86638348 86657083 + Dusp19 protein_coding processed_transcript MGP_CBAJ_T0055211.1 MGP_CBAJ_G0025599.1 mouse_genomes_project 2 86638474 86656177 + Dusp19 protein_coding processed_transcript MGP_CBAJ_T0055212.1 MGP_CBAJ_G0025599.1 mouse_genomes_project 2 86638479 86645518 + Dusp19 protein_coding processed_transcript MGP_CBAJ_T0055214.1 MGP_CBAJ_G0025599.1 mouse_genomes_project 2 86638514 86657721 + Dusp19 protein_coding processed_transcript MGP_CBAJ_T0013554.1 MGP_CBAJ_G0011666.1 mouse_genomes_project 2 130163388 130163657 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055366.1 MGP_CBAJ_G0025643.1 mouse_genomes_project 2 92250756 92275997 - MGP_CBAJ_P0055366 Olfr1006 protein_coding protein_coding MGP_CBAJ_T0056841.1 MGP_CBAJ_G0026087.1 mouse_genomes_project 2 132848584 132880444 + MGP_CBAJ_P0056841 Pdia3 protein_coding protein_coding MGP_CBAJ_T0056842.1 MGP_CBAJ_G0026087.1 mouse_genomes_project 2 132848692 132861372 + Pdia3 protein_coding processed_transcript MGP_CBAJ_T0056843.1 MGP_CBAJ_G0026087.1 mouse_genomes_project 2 132848917 132870472 + MGP_CBAJ_P0056843 Pdia3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056844.1 MGP_CBAJ_G0026087.1 mouse_genomes_project 2 132861400 132868919 + Pdia3 protein_coding retained_intron MGP_CBAJ_T0013332.1 MGP_CBAJ_G0011444.1 mouse_genomes_project 2 41622294 41622730 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055390.1 MGP_CBAJ_G0025666.1 mouse_genomes_project 2 92830725 92831670 - MGP_CBAJ_P0055390 Olfr1043 protein_coding protein_coding MGP_CBAJ_T0003961.1 MGP_CBAJ_G0003519.1 mouse_genomes_project 2 101556920 101573216 + Gm13807 antisense antisense MGP_CBAJ_T0098020.1 MGP_CBAJ_G0036293.1 mouse_genomes_project 2 122869684 122869798 - n-R5s202 rRNA rRNA MGP_CBAJ_T0007179.1 MGP_CBAJ_G0005881.1 mouse_genomes_project 2 112574247 112610955 - A930006I01Rik lincRNA lincRNA MGP_CBAJ_T0057946.1 MGP_CBAJ_G0026368.1 mouse_genomes_project 2 167701121 167701843 - MGP_CBAJ_P0057946 Defb25 protein_coding protein_coding MGP_CBAJ_T0053690.1 MGP_CBAJ_G0025311.1 mouse_genomes_project 2 32814479 32816280 - Uck1 protein_coding retained_intron MGP_CBAJ_T0053691.1 MGP_CBAJ_G0025311.1 mouse_genomes_project 2 32815354 32819627 - MGP_CBAJ_P0053691 Uck1 protein_coding protein_coding MGP_CBAJ_T0053692.1 MGP_CBAJ_G0025311.1 mouse_genomes_project 2 32815879 32819255 - MGP_CBAJ_P0053692 Uck1 protein_coding protein_coding MGP_CBAJ_T0053693.1 MGP_CBAJ_G0025311.1 mouse_genomes_project 2 32817457 32819244 - Uck1 protein_coding retained_intron MGP_CBAJ_T0053694.1 MGP_CBAJ_G0025311.1 mouse_genomes_project 2 32817706 32819672 - Uck1 protein_coding retained_intron MGP_CBAJ_T0059128.1 MGP_CBAJ_G0026626.1 mouse_genomes_project 2 187346965 187354941 - MGP_CBAJ_P0059128 Gm11011 protein_coding protein_coding MGP_CBAJ_T0056250.1 MGP_CBAJ_G0025942.1 mouse_genomes_project 2 120285604 120330009 - MGP_CBAJ_P0056250 Bbox1 protein_coding protein_coding MGP_CBAJ_T0056251.1 MGP_CBAJ_G0025942.1 mouse_genomes_project 2 120314960 120338416 - MGP_CBAJ_P0056251 Bbox1 protein_coding protein_coding MGP_CBAJ_T0055541.1 MGP_CBAJ_G0025798.1 mouse_genomes_project 2 97020548 97021493 - MGP_CBAJ_P0055541 Olfr1241 protein_coding protein_coding MGP_CBAJ_T0013475.1 MGP_CBAJ_G0011587.1 mouse_genomes_project 2 94630352 94631076 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010220.1 MGP_CBAJ_G0008358.1 mouse_genomes_project 2 8372337 8372435 + Mir669l miRNA miRNA MGP_CBAJ_T0056303.1 MGP_CBAJ_G0025982.1 mouse_genomes_project 2 122639973 122641319 + MGP_CBAJ_P0056303 Nop10 protein_coding protein_coding MGP_CBAJ_T0004045.1 MGP_CBAJ_G0003575.1 mouse_genomes_project 2 161570865 161571857 + 6430503K07Rik antisense antisense MGP_CBAJ_T0057475.1 MGP_CBAJ_G0026239.1 mouse_genomes_project 2 145212617 145216655 - MGP_CBAJ_P0057475 protein_coding protein_coding MGP_CBAJ_T0057476.1 MGP_CBAJ_G0026239.1 mouse_genomes_project 2 145213251 145215937 - protein_coding processed_transcript MGP_CBAJ_T0057477.1 MGP_CBAJ_G0026239.1 mouse_genomes_project 2 145214671 145216308 - protein_coding retained_intron MGP_CBAJ_T0057478.1 MGP_CBAJ_G0026239.1 mouse_genomes_project 2 145214771 145215943 - protein_coding retained_intron MGP_CBAJ_T0007290.1 MGP_CBAJ_G0005972.1 mouse_genomes_project 2 183281961 183283031 - Gm11466 lincRNA lincRNA MGP_CBAJ_T0056274.1 MGP_CBAJ_G0025956.1 mouse_genomes_project 2 121481854 121482543 + MGP_CBAJ_P0056274 protein_coding protein_coding MGP_CBAJ_T0053895.1 MGP_CBAJ_G0025341.1 mouse_genomes_project 2 33668765 33677800 - Slc2a8 protein_coding retained_intron MGP_CBAJ_T0053896.1 MGP_CBAJ_G0025341.1 mouse_genomes_project 2 33668765 33677814 - MGP_CBAJ_P0053896 Slc2a8 protein_coding protein_coding MGP_CBAJ_T0053897.1 MGP_CBAJ_G0025341.1 mouse_genomes_project 2 33669360 33677749 - MGP_CBAJ_P0053897 Slc2a8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053898.1 MGP_CBAJ_G0025341.1 mouse_genomes_project 2 33669360 33677749 - MGP_CBAJ_P0053898 Slc2a8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053899.1 MGP_CBAJ_G0025341.1 mouse_genomes_project 2 33669360 33677749 - MGP_CBAJ_P0053899 Slc2a8 protein_coding protein_coding MGP_CBAJ_T0053900.1 MGP_CBAJ_G0025341.1 mouse_genomes_project 2 33671702 33677803 - MGP_CBAJ_P0053900 Slc2a8 protein_coding protein_coding MGP_CBAJ_T0053901.1 MGP_CBAJ_G0025341.1 mouse_genomes_project 2 33672686 33677751 - Slc2a8 protein_coding retained_intron MGP_CBAJ_T0053902.1 MGP_CBAJ_G0025341.1 mouse_genomes_project 2 33677217 33677815 - Slc2a8 protein_coding processed_transcript MGP_CBAJ_T0056387.1 MGP_CBAJ_G0026003.1 mouse_genomes_project 2 127772375 127785808 + MGP_CBAJ_P0056387 Tmco5 protein_coding protein_coding MGP_CBAJ_T0056388.1 MGP_CBAJ_G0026003.1 mouse_genomes_project 2 127772378 127785764 + MGP_CBAJ_P0056388 Tmco5 protein_coding protein_coding MGP_CBAJ_T0056389.1 MGP_CBAJ_G0026003.1 mouse_genomes_project 2 127772392 127786121 + MGP_CBAJ_P0056389 Tmco5 protein_coding protein_coding MGP_CBAJ_T0056390.1 MGP_CBAJ_G0026003.1 mouse_genomes_project 2 127781817 127786121 + Tmco5 protein_coding processed_transcript MGP_CBAJ_T0054265.1 MGP_CBAJ_G0025426.1 mouse_genomes_project 2 42113775 42137731 - Lrp1b protein_coding processed_transcript MGP_CBAJ_T0054266.1 MGP_CBAJ_G0025426.1 mouse_genomes_project 2 42113777 44501197 - MGP_CBAJ_P0054266 Lrp1b protein_coding protein_coding MGP_CBAJ_T0054267.1 MGP_CBAJ_G0025426.1 mouse_genomes_project 2 42114063 42151206 - MGP_CBAJ_P0054267 Lrp1b protein_coding protein_coding MGP_CBAJ_T0054268.1 MGP_CBAJ_G0025426.1 mouse_genomes_project 2 42114063 42238925 - MGP_CBAJ_P0054268 Lrp1b protein_coding protein_coding MGP_CBAJ_T0054269.1 MGP_CBAJ_G0025426.1 mouse_genomes_project 2 42118806 42186132 - MGP_CBAJ_P0054269 Lrp1b protein_coding protein_coding MGP_CBAJ_T0054270.1 MGP_CBAJ_G0025426.1 mouse_genomes_project 2 42211773 42235902 - Lrp1b protein_coding retained_intron MGP_CBAJ_T0054271.1 MGP_CBAJ_G0025426.1 mouse_genomes_project 2 42369572 43508127 - MGP_CBAJ_P0054271 Lrp1b protein_coding protein_coding MGP_CBAJ_T0054272.1 MGP_CBAJ_G0025426.1 mouse_genomes_project 2 42930367 44500629 - MGP_CBAJ_P0054272 Lrp1b protein_coding protein_coding MGP_CBAJ_T0054273.1 MGP_CBAJ_G0025426.1 mouse_genomes_project 2 43187244 44500645 - Lrp1b protein_coding retained_intron MGP_CBAJ_T0054274.1 MGP_CBAJ_G0025426.1 mouse_genomes_project 2 43809931 44500498 - MGP_CBAJ_P0054274 Lrp1b protein_coding protein_coding MGP_CBAJ_T0054275.1 MGP_CBAJ_G0025426.1 mouse_genomes_project 2 44096753 44500828 - Lrp1b protein_coding retained_intron MGP_CBAJ_T0054276.1 MGP_CBAJ_G0025426.1 mouse_genomes_project 2 44497351 44500587 - MGP_CBAJ_P0054276 Lrp1b protein_coding protein_coding MGP_CBAJ_T0055796.1 MGP_CBAJ_G0025856.1 mouse_genomes_project 2 99650116 99870530 + MGP_CBAJ_P0055796 Ambra1 protein_coding protein_coding MGP_CBAJ_T0055797.1 MGP_CBAJ_G0025856.1 mouse_genomes_project 2 99650120 99870529 + MGP_CBAJ_P0055797 Ambra1 protein_coding protein_coding MGP_CBAJ_T0055798.1 MGP_CBAJ_G0025856.1 mouse_genomes_project 2 99650164 99749474 + Ambra1 protein_coding processed_transcript MGP_CBAJ_T0055799.1 MGP_CBAJ_G0025856.1 mouse_genomes_project 2 99650164 99749474 + Ambra1 protein_coding processed_transcript MGP_CBAJ_T0055800.1 MGP_CBAJ_G0025856.1 mouse_genomes_project 2 99650166 99870529 + MGP_CBAJ_P0055800 Ambra1 protein_coding protein_coding MGP_CBAJ_T0055801.1 MGP_CBAJ_G0025856.1 mouse_genomes_project 2 99650207 99870530 + MGP_CBAJ_P0055801 Ambra1 protein_coding protein_coding MGP_CBAJ_T0055802.1 MGP_CBAJ_G0025856.1 mouse_genomes_project 2 99701169 99870530 + MGP_CBAJ_P0055802 Ambra1 protein_coding protein_coding MGP_CBAJ_T0055803.1 MGP_CBAJ_G0025856.1 mouse_genomes_project 2 99710418 99767416 + Ambra1 protein_coding processed_transcript MGP_CBAJ_T0055804.1 MGP_CBAJ_G0025856.1 mouse_genomes_project 2 99750172 99768249 + Ambra1 protein_coding processed_transcript MGP_CBAJ_T0007135.1 MGP_CBAJ_G0005846.1 mouse_genomes_project 2 80128651 80130736 - Haglr lincRNA lincRNA MGP_CBAJ_T0007136.1 MGP_CBAJ_G0005846.1 mouse_genomes_project 2 80130662 80146774 - Haglr lincRNA lincRNA MGP_CBAJ_T0059441.1 MGP_CBAJ_G0026706.1 mouse_genomes_project 2 200191357 200200444 - MGP_CBAJ_P0059441 Ptk6 protein_coding protein_coding MGP_CBAJ_T0013701.1 MGP_CBAJ_G0011813.1 mouse_genomes_project 2 200813780 200814681 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055455.1 MGP_CBAJ_G0025722.1 mouse_genomes_project 2 94642640 94673028 + MGP_CBAJ_P0055455 Olfr1126 protein_coding protein_coding MGP_CBAJ_T0055196.1 MGP_CBAJ_G0025595.1 mouse_genomes_project 2 86238902 86241793 + MGP_CBAJ_P0055196 Prdx6b protein_coding protein_coding MGP_CBAJ_T0054739.1 MGP_CBAJ_G0025503.1 mouse_genomes_project 2 73150952 73195147 + MGP_CBAJ_P0054739 4933409G03Rik protein_coding protein_coding MGP_CBAJ_T0054740.1 MGP_CBAJ_G0025503.1 mouse_genomes_project 2 73174144 73193465 + MGP_CBAJ_P0054740 4933409G03Rik protein_coding protein_coding MGP_CBAJ_T0059267.1 MGP_CBAJ_G0026669.1 mouse_genomes_project 2 197009804 197084691 - MGP_CBAJ_P0059267 protein_coding protein_coding MGP_CBAJ_T0059268.1 MGP_CBAJ_G0026669.1 mouse_genomes_project 2 197010630 197042086 - protein_coding processed_transcript MGP_CBAJ_T0059269.1 MGP_CBAJ_G0026669.1 mouse_genomes_project 2 197036545 197042426 - protein_coding retained_intron MGP_CBAJ_T0059270.1 MGP_CBAJ_G0026669.1 mouse_genomes_project 2 197064163 197084428 - MGP_CBAJ_P0059270 protein_coding protein_coding MGP_CBAJ_T0053162.1 MGP_CBAJ_G0025229.1 mouse_genomes_project 2 27699221 27870670 + MGP_CBAJ_P0053162 Col5a1 protein_coding protein_coding MGP_CBAJ_T0053163.1 MGP_CBAJ_G0025229.1 mouse_genomes_project 2 27845253 27864832 + MGP_CBAJ_P0053163 Col5a1 protein_coding protein_coding MGP_CBAJ_T0004076.1 MGP_CBAJ_G0003603.1 mouse_genomes_project 2 180065211 180106556 - Hnf4aos antisense antisense MGP_CBAJ_T0004077.1 MGP_CBAJ_G0003603.1 mouse_genomes_project 2 180065211 180106556 - Hnf4aos antisense antisense MGP_CBAJ_T0004078.1 MGP_CBAJ_G0003603.1 mouse_genomes_project 2 180065598 180106528 - Hnf4aos antisense antisense MGP_CBAJ_T0059274.1 MGP_CBAJ_G0026672.1 mouse_genomes_project 2 197118003 197170588 + MGP_CBAJ_P0059274 Cdh26 protein_coding protein_coding MGP_CBAJ_T0059275.1 MGP_CBAJ_G0026672.1 mouse_genomes_project 2 197118079 197170590 + MGP_CBAJ_P0059275 Cdh26 protein_coding protein_coding MGP_CBAJ_T0059276.1 MGP_CBAJ_G0026672.1 mouse_genomes_project 2 197143954 197149798 + Cdh26 protein_coding retained_intron MGP_CBAJ_T0099141.1 MGP_CBAJ_G0037396.1 mouse_genomes_project 2 179278617 179278775 - Gm24478 snRNA snRNA MGP_CBAJ_T0055369.1 MGP_CBAJ_G0025646.1 mouse_genomes_project 2 92353839 92354775 - MGP_CBAJ_P0055369 Olfr1012 protein_coding protein_coding MGP_CBAJ_T0057222.1 MGP_CBAJ_G0026184.1 mouse_genomes_project 2 141786176 141793535 + MGP_CBAJ_P0057222 Slc20a1 protein_coding unknown_likely_coding MGP_CBAJ_T0057223.1 MGP_CBAJ_G0026184.1 mouse_genomes_project 2 141786196 141800834 + MGP_CBAJ_P0057223 Slc20a1 protein_coding protein_coding MGP_CBAJ_T0057224.1 MGP_CBAJ_G0026184.1 mouse_genomes_project 2 141786233 141788551 + Slc20a1 protein_coding retained_intron MGP_CBAJ_T0057225.1 MGP_CBAJ_G0026184.1 mouse_genomes_project 2 141786235 141794326 + Slc20a1 protein_coding processed_transcript MGP_CBAJ_T0057226.1 MGP_CBAJ_G0026184.1 mouse_genomes_project 2 141786235 141788549 + Slc20a1 protein_coding retained_intron MGP_CBAJ_T0057227.1 MGP_CBAJ_G0026184.1 mouse_genomes_project 2 141786576 141787188 + MGP_CBAJ_P0057227 Slc20a1 protein_coding protein_coding MGP_CBAJ_T0057228.1 MGP_CBAJ_G0026184.1 mouse_genomes_project 2 141786739 141800827 + MGP_CBAJ_P0057228 Slc20a1 protein_coding protein_coding MGP_CBAJ_T0057229.1 MGP_CBAJ_G0026184.1 mouse_genomes_project 2 141795537 141797476 + Slc20a1 protein_coding retained_intron MGP_CBAJ_T0057230.1 MGP_CBAJ_G0026184.1 mouse_genomes_project 2 141796577 141797244 + Slc20a1 protein_coding retained_intron MGP_CBAJ_T0098023.1 MGP_CBAJ_G0036296.1 mouse_genomes_project 2 132005330 132005455 - n-R5s205 rRNA rRNA MGP_CBAJ_T0003989.1 MGP_CBAJ_G0003534.1 mouse_genomes_project 2 127741184 127770863 - Gm13990 antisense antisense MGP_CBAJ_T0052265.1 MGP_CBAJ_G0025065.1 mouse_genomes_project 2 11218554 11226900 - MGP_CBAJ_P0052265 C1ql3 protein_coding protein_coding MGP_CBAJ_T0052526.1 MGP_CBAJ_G0025113.1 mouse_genomes_project 2 23283669 23339649 - MGP_CBAJ_P0052526 Hnmt protein_coding protein_coding MGP_CBAJ_T0052527.1 MGP_CBAJ_G0025113.1 mouse_genomes_project 2 23283699 23339339 - MGP_CBAJ_P0052527 Hnmt protein_coding protein_coding MGP_CBAJ_T0052528.1 MGP_CBAJ_G0025113.1 mouse_genomes_project 2 23284288 23339126 - MGP_CBAJ_P0052528 Hnmt protein_coding protein_coding MGP_CBAJ_T0013255.1 MGP_CBAJ_G0011367.1 mouse_genomes_project 2 13845472 13846442 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101786.1 MGP_CBAJ_G0039817.1 mouse_genomes_project 2 40269659 40273058 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0056318.1 MGP_CBAJ_G0025988.1 mouse_genomes_project 2 122880804 122882403 - MGP_CBAJ_P0056318 Chrm5 protein_coding protein_coding MGP_CBAJ_T0007175.1 MGP_CBAJ_G0005879.1 mouse_genomes_project 2 112391344 112396444 + Gm13874 lincRNA lincRNA MGP_CBAJ_T0007176.1 MGP_CBAJ_G0005879.1 mouse_genomes_project 2 112391728 112396444 + Gm13874 lincRNA lincRNA MGP_CBAJ_T0007177.1 MGP_CBAJ_G0005879.1 mouse_genomes_project 2 112395777 112400258 + Gm13874 lincRNA lincRNA MGP_CBAJ_T0058098.1 MGP_CBAJ_G0026410.1 mouse_genomes_project 2 169789893 169903781 + MGP_CBAJ_P0058098 Cbfa2t2 protein_coding protein_coding MGP_CBAJ_T0058099.1 MGP_CBAJ_G0026410.1 mouse_genomes_project 2 169789896 169888337 + MGP_CBAJ_P0058099 Cbfa2t2 protein_coding protein_coding MGP_CBAJ_T0058100.1 MGP_CBAJ_G0026410.1 mouse_genomes_project 2 169789935 169903781 + MGP_CBAJ_P0058100 Cbfa2t2 protein_coding protein_coding MGP_CBAJ_T0058101.1 MGP_CBAJ_G0026410.1 mouse_genomes_project 2 169789975 169879753 + MGP_CBAJ_P0058101 Cbfa2t2 protein_coding protein_coding MGP_CBAJ_T0058102.1 MGP_CBAJ_G0026410.1 mouse_genomes_project 2 169790282 169866655 + MGP_CBAJ_P0058102 Cbfa2t2 protein_coding protein_coding MGP_CBAJ_T0058103.1 MGP_CBAJ_G0026410.1 mouse_genomes_project 2 169872446 169903781 + MGP_CBAJ_P0058103 Cbfa2t2 protein_coding protein_coding MGP_CBAJ_T0058104.1 MGP_CBAJ_G0026410.1 mouse_genomes_project 2 169877890 169879981 + Cbfa2t2 protein_coding retained_intron MGP_CBAJ_T0058105.1 MGP_CBAJ_G0026410.1 mouse_genomes_project 2 169885907 169893465 + Cbfa2t2 protein_coding retained_intron MGP_CBAJ_T0058106.1 MGP_CBAJ_G0026410.1 mouse_genomes_project 2 169892904 169899410 + Cbfa2t2 protein_coding retained_intron MGP_CBAJ_T0007227.1 MGP_CBAJ_G0005919.1 mouse_genomes_project 2 145413037 145447275 + 4921508D12Rik lincRNA lincRNA MGP_CBAJ_T0013599.1 MGP_CBAJ_G0011711.1 mouse_genomes_project 2 153755560 153755998 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013700.1 MGP_CBAJ_G0011812.1 mouse_genomes_project 2 200313080 200313719 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013393.1 MGP_CBAJ_G0011505.1 mouse_genomes_project 2 66636101 66637689 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013520.1 MGP_CBAJ_G0011632.1 mouse_genomes_project 2 113147396 113147657 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007331.1 MGP_CBAJ_G0006006.1 mouse_genomes_project 2 193388448 193398963 + Gm14616 lincRNA lincRNA MGP_CBAJ_T0054511.1 MGP_CBAJ_G0025467.1 mouse_genomes_project 2 63082089 63106628 + MGP_CBAJ_P0054511 Dapl1 protein_coding protein_coding MGP_CBAJ_T0054512.1 MGP_CBAJ_G0025467.1 mouse_genomes_project 2 63082105 63106628 + Dapl1 protein_coding processed_transcript MGP_CBAJ_T0058036.1 MGP_CBAJ_G0026392.1 mouse_genomes_project 2 168893785 168913968 - MGP_CBAJ_P0058036 Commd7 protein_coding protein_coding MGP_CBAJ_T0058037.1 MGP_CBAJ_G0026392.1 mouse_genomes_project 2 168895582 168913918 - Commd7 protein_coding retained_intron MGP_CBAJ_T0058038.1 MGP_CBAJ_G0026392.1 mouse_genomes_project 2 168895582 168913927 - MGP_CBAJ_P0058038 Commd7 protein_coding protein_coding MGP_CBAJ_T0058039.1 MGP_CBAJ_G0026392.1 mouse_genomes_project 2 168896184 168913864 - MGP_CBAJ_P0058039 Commd7 protein_coding unknown_likely_coding MGP_CBAJ_T0101296.1 MGP_CBAJ_G0039410.1 mouse_genomes_project 2 93731761 93732709 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0001020.1 MGP_CBAJ_G0000952.1 mouse_genomes_project 2 13514581 13517342 + TEC TEC MGP_CBAJ_T0053569.1 MGP_CBAJ_G0025293.1 mouse_genomes_project 2 31348729 31492865 - MGP_CBAJ_P0053569 Fnbp1 protein_coding protein_coding MGP_CBAJ_T0053570.1 MGP_CBAJ_G0025293.1 mouse_genomes_project 2 31348730 31433542 - MGP_CBAJ_P0053570 Fnbp1 protein_coding protein_coding MGP_CBAJ_T0053571.1 MGP_CBAJ_G0025293.1 mouse_genomes_project 2 31348730 31493071 - MGP_CBAJ_P0053571 Fnbp1 protein_coding protein_coding MGP_CBAJ_T0053572.1 MGP_CBAJ_G0025293.1 mouse_genomes_project 2 31348731 31493059 - MGP_CBAJ_P0053572 Fnbp1 protein_coding protein_coding MGP_CBAJ_T0053573.1 MGP_CBAJ_G0025293.1 mouse_genomes_project 2 31349318 31493020 - MGP_CBAJ_P0053573 Fnbp1 protein_coding protein_coding MGP_CBAJ_T0053574.1 MGP_CBAJ_G0025293.1 mouse_genomes_project 2 31350718 31433542 - Fnbp1 protein_coding processed_transcript MGP_CBAJ_T0053575.1 MGP_CBAJ_G0025293.1 mouse_genomes_project 2 31355218 31445577 - MGP_CBAJ_P0053575 Fnbp1 protein_coding protein_coding MGP_CBAJ_T0053576.1 MGP_CBAJ_G0025293.1 mouse_genomes_project 2 31355523 31492865 - MGP_CBAJ_P0053576 Fnbp1 protein_coding protein_coding MGP_CBAJ_T0053577.1 MGP_CBAJ_G0025293.1 mouse_genomes_project 2 31355534 31492865 - MGP_CBAJ_P0053577 Fnbp1 protein_coding protein_coding MGP_CBAJ_T0053578.1 MGP_CBAJ_G0025293.1 mouse_genomes_project 2 31355534 31492865 - MGP_CBAJ_P0053578 Fnbp1 protein_coding protein_coding MGP_CBAJ_T0053579.1 MGP_CBAJ_G0025293.1 mouse_genomes_project 2 31355534 31492865 - MGP_CBAJ_P0053579 Fnbp1 protein_coding protein_coding MGP_CBAJ_T0053580.1 MGP_CBAJ_G0025293.1 mouse_genomes_project 2 31355615 31383466 - MGP_CBAJ_P0053580 Fnbp1 protein_coding protein_coding MGP_CBAJ_T0053581.1 MGP_CBAJ_G0025293.1 mouse_genomes_project 2 31378717 31493002 - MGP_CBAJ_P0053581 Fnbp1 protein_coding protein_coding MGP_CBAJ_T0053582.1 MGP_CBAJ_G0025293.1 mouse_genomes_project 2 31383588 31493018 - MGP_CBAJ_P0053582 Fnbp1 protein_coding protein_coding MGP_CBAJ_T0053583.1 MGP_CBAJ_G0025293.1 mouse_genomes_project 2 31386965 31456549 - MGP_CBAJ_P0053583 Fnbp1 protein_coding protein_coding MGP_CBAJ_T0053584.1 MGP_CBAJ_G0025293.1 mouse_genomes_project 2 31433132 31445675 - Fnbp1 protein_coding processed_transcript MGP_CBAJ_T0057502.1 MGP_CBAJ_G0026243.1 mouse_genomes_project 2 145722209 145804157 + MGP_CBAJ_P0057502 1110034G24Rik protein_coding protein_coding MGP_CBAJ_T0057503.1 MGP_CBAJ_G0026243.1 mouse_genomes_project 2 145725436 145803605 + MGP_CBAJ_P0057503 1110034G24Rik protein_coding protein_coding MGP_CBAJ_T0057504.1 MGP_CBAJ_G0026243.1 mouse_genomes_project 2 145725562 145804157 + MGP_CBAJ_P0057504 1110034G24Rik protein_coding protein_coding MGP_CBAJ_T0057505.1 MGP_CBAJ_G0026243.1 mouse_genomes_project 2 145738640 145803684 + 1110034G24Rik protein_coding processed_transcript MGP_CBAJ_T0001022.1 MGP_CBAJ_G0000954.1 mouse_genomes_project 2 22738177 22739695 + TEC TEC MGP_CBAJ_T0056296.1 MGP_CBAJ_G0025978.1 mouse_genomes_project 2 122395419 122396355 - MGP_CBAJ_P0056296 Olfr1313 protein_coding protein_coding MGP_CBAJ_T0053845.1 MGP_CBAJ_G0025333.1 mouse_genomes_project 2 33418629 33439495 - MGP_CBAJ_P0053845 Ttc16 protein_coding protein_coding MGP_CBAJ_T0053854.1 MGP_CBAJ_G0025333.1 mouse_genomes_project 2 33426338 33439451 - MGP_CBAJ_P0053854 Ttc16 protein_coding protein_coding MGP_CBAJ_T0053855.1 MGP_CBAJ_G0025333.1 mouse_genomes_project 2 33426339 33439696 - MGP_CBAJ_P0053855 Ttc16 protein_coding protein_coding MGP_CBAJ_T0053856.1 MGP_CBAJ_G0025333.1 mouse_genomes_project 2 33426424 33439442 - MGP_CBAJ_P0053856 Ttc16 protein_coding protein_coding MGP_CBAJ_T0053857.1 MGP_CBAJ_G0025333.1 mouse_genomes_project 2 33426424 33439451 - MGP_CBAJ_P0053857 Ttc16 protein_coding protein_coding MGP_CBAJ_T0053858.1 MGP_CBAJ_G0025333.1 mouse_genomes_project 2 33428290 33439745 - MGP_CBAJ_P0053858 Ttc16 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053859.1 MGP_CBAJ_G0025333.1 mouse_genomes_project 2 33436871 33439699 - Ttc16 protein_coding retained_intron MGP_CBAJ_T0053860.1 MGP_CBAJ_G0025333.1 mouse_genomes_project 2 33438618 33439743 - MGP_CBAJ_P0053860 Ttc16 protein_coding protein_coding MGP_CBAJ_T0056319.1 MGP_CBAJ_G0025989.1 mouse_genomes_project 2 122896422 123057862 + MGP_CBAJ_P0056319 Aven protein_coding protein_coding MGP_CBAJ_T0056320.1 MGP_CBAJ_G0025989.1 mouse_genomes_project 2 122968328 123053419 + Aven protein_coding processed_transcript MGP_CBAJ_T0056321.1 MGP_CBAJ_G0025989.1 mouse_genomes_project 2 122968680 123054254 + MGP_CBAJ_P0056321 Aven protein_coding protein_coding MGP_CBAJ_T0055387.1 MGP_CBAJ_G0025663.1 mouse_genomes_project 2 92811047 92812007 - MGP_CBAJ_P0055387 protein_coding protein_coding MGP_CBAJ_T0101797.1 MGP_CBAJ_G0039828.1 mouse_genomes_project 2 92572980 92574322 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013360.1 MGP_CBAJ_G0011472.1 mouse_genomes_project 2 55226493 55227332 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055416.1 MGP_CBAJ_G0025691.1 mouse_genomes_project 2 93660969 93661976 - MGP_CBAJ_P0055416 protein_coding protein_coding MGP_CBAJ_T0055579.1 MGP_CBAJ_G0025822.1 mouse_genomes_project 2 97726531 97753043 - MGP_CBAJ_P0055579 protein_coding protein_coding MGP_CBAJ_T0055542.1 MGP_CBAJ_G0025799.1 mouse_genomes_project 2 97051206 97052259 - MGP_CBAJ_P0055542 Olfr1242 protein_coding protein_coding MGP_CBAJ_T0055543.1 MGP_CBAJ_G0025799.1 mouse_genomes_project 2 97051302 97065389 - MGP_CBAJ_P0055543 Olfr1242 protein_coding protein_coding MGP_CBAJ_T0055544.1 MGP_CBAJ_G0025799.1 mouse_genomes_project 2 97051932 97064880 - Olfr1242 protein_coding processed_transcript MGP_CBAJ_T0054025.1 MGP_CBAJ_G0025360.1 mouse_genomes_project 2 36012041 36030297 - MGP_CBAJ_P0054025 AI182371 protein_coding unknown_likely_coding MGP_CBAJ_T0054026.1 MGP_CBAJ_G0025360.1 mouse_genomes_project 2 36015447 36030329 - MGP_CBAJ_P0054026 AI182371 protein_coding protein_coding MGP_CBAJ_T0054027.1 MGP_CBAJ_G0025360.1 mouse_genomes_project 2 36017442 36030328 - MGP_CBAJ_P0054027 AI182371 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054028.1 MGP_CBAJ_G0025360.1 mouse_genomes_project 2 36017783 36025499 - AI182371 protein_coding processed_transcript MGP_CBAJ_T0054029.1 MGP_CBAJ_G0025360.1 mouse_genomes_project 2 36020502 36031187 - AI182371 protein_coding processed_transcript MGP_CBAJ_T0055039.1 MGP_CBAJ_G0025564.1 mouse_genomes_project 2 80085607 80128501 + MGP_CBAJ_P0055039 Hoxd3 protein_coding protein_coding MGP_CBAJ_T0055044.1 MGP_CBAJ_G0025564.1 mouse_genomes_project 2 80107827 80124444 + MGP_CBAJ_P0055044 Hoxd3 protein_coding protein_coding MGP_CBAJ_T0055045.1 MGP_CBAJ_G0025564.1 mouse_genomes_project 2 80111414 80128145 + MGP_CBAJ_P0055045 Hoxd3 protein_coding protein_coding MGP_CBAJ_T0055046.1 MGP_CBAJ_G0025564.1 mouse_genomes_project 2 80114518 80128130 + MGP_CBAJ_P0055046 Hoxd3 protein_coding protein_coding MGP_CBAJ_T0055047.1 MGP_CBAJ_G0025564.1 mouse_genomes_project 2 80125903 80126826 + MGP_CBAJ_P0055047 Hoxd3 protein_coding protein_coding MGP_CBAJ_T0055048.1 MGP_CBAJ_G0025564.1 mouse_genomes_project 2 80125951 80128672 + Hoxd3 protein_coding retained_intron MGP_CBAJ_T0057873.1 MGP_CBAJ_G0026338.1 mouse_genomes_project 2 166509134 166553770 - MGP_CBAJ_P0057873 Snph protein_coding protein_coding MGP_CBAJ_T0057874.1 MGP_CBAJ_G0026338.1 mouse_genomes_project 2 166509134 166553746 - MGP_CBAJ_P0057874 Snph protein_coding protein_coding MGP_CBAJ_T0057875.1 MGP_CBAJ_G0026338.1 mouse_genomes_project 2 166509149 166553764 - MGP_CBAJ_P0057875 Snph protein_coding protein_coding MGP_CBAJ_T0057876.1 MGP_CBAJ_G0026338.1 mouse_genomes_project 2 166510310 166553790 - MGP_CBAJ_P0057876 Snph protein_coding protein_coding MGP_CBAJ_T0057877.1 MGP_CBAJ_G0026338.1 mouse_genomes_project 2 166515740 166553668 - MGP_CBAJ_P0057877 Snph protein_coding protein_coding MGP_CBAJ_T0057878.1 MGP_CBAJ_G0026338.1 mouse_genomes_project 2 166519401 166553723 - Snph protein_coding retained_intron MGP_CBAJ_T0057879.1 MGP_CBAJ_G0026338.1 mouse_genomes_project 2 166519564 166553737 - MGP_CBAJ_P0057879 Snph protein_coding protein_coding MGP_CBAJ_T0057880.1 MGP_CBAJ_G0026338.1 mouse_genomes_project 2 166519581 166553758 - MGP_CBAJ_P0057880 Snph protein_coding protein_coding MGP_CBAJ_T0057881.1 MGP_CBAJ_G0026338.1 mouse_genomes_project 2 166519789 166553770 - Snph protein_coding processed_transcript MGP_CBAJ_T0057882.1 MGP_CBAJ_G0026338.1 mouse_genomes_project 2 166542411 166553764 - Snph protein_coding processed_transcript MGP_CBAJ_T0057883.1 MGP_CBAJ_G0026338.1 mouse_genomes_project 2 166552929 166553750 - Snph protein_coding retained_intron MGP_CBAJ_T0055741.1 MGP_CBAJ_G0025847.1 mouse_genomes_project 2 99100446 99101668 + Arfgap2 protein_coding retained_intron MGP_CBAJ_T0055742.1 MGP_CBAJ_G0025847.1 mouse_genomes_project 2 99100455 99110908 + MGP_CBAJ_P0055742 Arfgap2 protein_coding unknown_likely_coding MGP_CBAJ_T0055743.1 MGP_CBAJ_G0025847.1 mouse_genomes_project 2 99100456 99103875 + Arfgap2 protein_coding retained_intron MGP_CBAJ_T0055744.1 MGP_CBAJ_G0025847.1 mouse_genomes_project 2 99100824 99102512 + Arfgap2 protein_coding processed_transcript MGP_CBAJ_T0055745.1 MGP_CBAJ_G0025847.1 mouse_genomes_project 2 99104464 99108730 + Arfgap2 protein_coding retained_intron MGP_CBAJ_T0055746.1 MGP_CBAJ_G0025847.1 mouse_genomes_project 2 99105214 99109248 + Arfgap2 protein_coding retained_intron MGP_CBAJ_T0056943.1 MGP_CBAJ_G0026116.1 mouse_genomes_project 2 134387756 134391508 + MGP_CBAJ_P0056943 AA467197 protein_coding protein_coding MGP_CBAJ_T0056944.1 MGP_CBAJ_G0026116.1 mouse_genomes_project 2 134388621 134391972 + MGP_CBAJ_P0056944 AA467197 protein_coding protein_coding MGP_CBAJ_T0056945.1 MGP_CBAJ_G0026116.1 mouse_genomes_project 2 134388686 134391722 + AA467197 protein_coding processed_transcript MGP_CBAJ_T0056946.1 MGP_CBAJ_G0026116.1 mouse_genomes_project 2 134388686 134391864 + MGP_CBAJ_P0056946 AA467197 protein_coding protein_coding MGP_CBAJ_T0013457.1 MGP_CBAJ_G0011569.1 mouse_genomes_project 2 89925691 89925832 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013636.1 MGP_CBAJ_G0011748.1 mouse_genomes_project 2 165850477 165851260 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0057945.1 MGP_CBAJ_G0026367.1 mouse_genomes_project 2 167669992 167684712 + MGP_CBAJ_P0057945 Defb36 protein_coding protein_coding MGP_CBAJ_T0057304.1 MGP_CBAJ_G0026204.1 mouse_genomes_project 2 143124809 143141153 + Vps16 protein_coding retained_intron MGP_CBAJ_T0057305.1 MGP_CBAJ_G0026204.1 mouse_genomes_project 2 143124835 143146969 + MGP_CBAJ_P0057305 Vps16 protein_coding protein_coding MGP_CBAJ_T0057306.1 MGP_CBAJ_G0026204.1 mouse_genomes_project 2 143124835 143142617 + MGP_CBAJ_P0057306 Vps16 protein_coding protein_coding MGP_CBAJ_T0057307.1 MGP_CBAJ_G0026204.1 mouse_genomes_project 2 143124874 143142996 + Vps16 protein_coding processed_transcript MGP_CBAJ_T0057308.1 MGP_CBAJ_G0026204.1 mouse_genomes_project 2 143140335 143141767 + Vps16 protein_coding retained_intron MGP_CBAJ_T0057309.1 MGP_CBAJ_G0026204.1 mouse_genomes_project 2 143142329 143144405 + Vps16 protein_coding retained_intron MGP_CBAJ_T0057310.1 MGP_CBAJ_G0026204.1 mouse_genomes_project 2 143143021 143144007 + Vps16 protein_coding retained_intron MGP_CBAJ_T0057311.1 MGP_CBAJ_G0026204.1 mouse_genomes_project 2 143144307 143146099 + Vps16 protein_coding retained_intron MGP_CBAJ_T0057312.1 MGP_CBAJ_G0026204.1 mouse_genomes_project 2 143145866 143146434 + Vps16 protein_coding retained_intron MGP_CBAJ_T0053416.1 MGP_CBAJ_G0025271.1 mouse_genomes_project 2 30393891 30420036 + MGP_CBAJ_P0053416 protein_coding protein_coding MGP_CBAJ_T0053417.1 MGP_CBAJ_G0025271.1 mouse_genomes_project 2 30393898 30420041 + MGP_CBAJ_P0053417 protein_coding protein_coding MGP_CBAJ_T0010270.1 MGP_CBAJ_G0008408.1 mouse_genomes_project 2 30982328 30982412 + Mir3089 miRNA miRNA MGP_CBAJ_T0010333.1 MGP_CBAJ_G0008471.1 mouse_genomes_project 2 142680624 142680741 - Mir6339 miRNA miRNA MGP_CBAJ_T0100339.1 MGP_CBAJ_G0038594.1 mouse_genomes_project 2 8964381 8964510 - Gm23877 snoRNA snoRNA MGP_CBAJ_T0100377.1 MGP_CBAJ_G0038632.1 mouse_genomes_project 2 99501084 99501195 + Snord67 snoRNA snoRNA MGP_CBAJ_T0057251.1 MGP_CBAJ_G0026190.1 mouse_genomes_project 2 142314424 142327705 - MGP_CBAJ_P0057251 Pdyn protein_coding protein_coding MGP_CBAJ_T0057252.1 MGP_CBAJ_G0026190.1 mouse_genomes_project 2 142316355 142326530 - MGP_CBAJ_P0057252 Pdyn protein_coding protein_coding MGP_CBAJ_T0057253.1 MGP_CBAJ_G0026190.1 mouse_genomes_project 2 142325857 142327716 - Pdyn protein_coding retained_intron MGP_CBAJ_T0010315.1 MGP_CBAJ_G0008453.1 mouse_genomes_project 2 102828455 102828536 - Gm44461 miRNA miRNA MGP_CBAJ_T0010207.1 MGP_CBAJ_G0008345.1 mouse_genomes_project 2 27912 28019 + Gm27306 miRNA miRNA MGP_CBAJ_T0013490.1 MGP_CBAJ_G0011602.1 mouse_genomes_project 2 102002412 102002923 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100366.1 MGP_CBAJ_G0038621.1 mouse_genomes_project 2 57724154 57724293 - Gm24549 snoRNA snoRNA MGP_CBAJ_T0007032.1 MGP_CBAJ_G0005765.1 mouse_genomes_project 2 6901978 6912319 + 1700061F12Rik lincRNA lincRNA MGP_CBAJ_T0101081.1 MGP_CBAJ_G0039292.1 mouse_genomes_project 2 54149778 54150133 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101082.1 MGP_CBAJ_G0039292.1 mouse_genomes_project 2 54149926 54150077 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0099101.1 MGP_CBAJ_G0037356.1 mouse_genomes_project 2 39707156 39707264 + Gm25081 snRNA snRNA MGP_CBAJ_T0100395.1 MGP_CBAJ_G0038650.1 mouse_genomes_project 2 142971470 142971603 + Gm24451 snoRNA snoRNA MGP_CBAJ_T0056836.1 MGP_CBAJ_G0026086.1 mouse_genomes_project 2 132820324 132848419 - MGP_CBAJ_P0056836 Catsper2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056837.1 MGP_CBAJ_G0026086.1 mouse_genomes_project 2 132820709 132848575 - MGP_CBAJ_P0056837 Catsper2 protein_coding unknown_likely_coding MGP_CBAJ_T0056838.1 MGP_CBAJ_G0026086.1 mouse_genomes_project 2 132822050 132848602 - MGP_CBAJ_P0056838 Catsper2 protein_coding protein_coding MGP_CBAJ_T0056839.1 MGP_CBAJ_G0026086.1 mouse_genomes_project 2 132822052 132830579 - Catsper2 protein_coding retained_intron MGP_CBAJ_T0056840.1 MGP_CBAJ_G0026086.1 mouse_genomes_project 2 132845047 132847106 - Catsper2 protein_coding retained_intron MGP_CBAJ_T0017515.1 MGP_CBAJ_G0015158.1 mouse_genomes_project 2 39910783 39914793 + Gm13587 processed_transcript processed_transcript MGP_CBAJ_T0058890.1 MGP_CBAJ_G0026582.1 mouse_genomes_project 2 181923150 181938286 - MGP_CBAJ_P0058890 1700025C18Rik protein_coding protein_coding MGP_CBAJ_T0013306.1 MGP_CBAJ_G0011418.1 mouse_genomes_project 2 34430478 34430888 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0059553.1 MGP_CBAJ_G0026723.1 mouse_genomes_project 2 200645292 200680782 + MGP_CBAJ_P0059553 Prpf6 protein_coding protein_coding MGP_CBAJ_T0059557.1 MGP_CBAJ_G0026723.1 mouse_genomes_project 2 200661622 200735568 + MGP_CBAJ_P0059557 Prpf6 protein_coding protein_coding MGP_CBAJ_T0059558.1 MGP_CBAJ_G0026723.1 mouse_genomes_project 2 200661625 200735577 + MGP_CBAJ_P0059558 Prpf6 protein_coding protein_coding MGP_CBAJ_T0059559.1 MGP_CBAJ_G0026723.1 mouse_genomes_project 2 200661679 200719250 + Prpf6 protein_coding retained_intron MGP_CBAJ_T0001033.1 MGP_CBAJ_G0000965.1 mouse_genomes_project 2 37120403 37123575 - TEC TEC MGP_CBAJ_T0053085.1 MGP_CBAJ_G0025215.1 mouse_genomes_project 2 26641949 26651038 + MGP_CBAJ_P0053085 Stkld1 protein_coding protein_coding MGP_CBAJ_T0053086.1 MGP_CBAJ_G0025215.1 mouse_genomes_project 2 26641971 26666323 + MGP_CBAJ_P0053086 Stkld1 protein_coding protein_coding MGP_CBAJ_T0053087.1 MGP_CBAJ_G0025215.1 mouse_genomes_project 2 26643225 26666218 + MGP_CBAJ_P0053087 Stkld1 protein_coding unknown_likely_coding MGP_CBAJ_T0017541.1 MGP_CBAJ_G0015179.1 mouse_genomes_project 2 95163134 95166072 - Gm13747 processed_transcript processed_transcript MGP_CBAJ_T0053620.1 MGP_CBAJ_G0025299.1 mouse_genomes_project 2 32043241 32058982 + MGP_CBAJ_P0053620 Prdm12 protein_coding protein_coding MGP_CBAJ_T0053022.1 MGP_CBAJ_G0025204.1 mouse_genomes_project 2 26191356 26247411 + MGP_CBAJ_P0053022 Gm20532 protein_coding nonsense_mediated_decay MGP_CBAJ_T0013479.1 MGP_CBAJ_G0011591.1 mouse_genomes_project 2 95916198 95927503 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0057635.1 MGP_CBAJ_G0026275.1 mouse_genomes_project 2 157583102 157855726 + MGP_CBAJ_P0057635 Pcsk2 protein_coding protein_coding MGP_CBAJ_T0057636.1 MGP_CBAJ_G0026275.1 mouse_genomes_project 2 157583217 157613820 + Pcsk2 protein_coding processed_transcript MGP_CBAJ_T0004097.1 MGP_CBAJ_G0003617.1 mouse_genomes_project 2 188257132 188285931 + Bcas1os2 antisense antisense MGP_CBAJ_T0059350.1 MGP_CBAJ_G0026690.1 mouse_genomes_project 2 199522520 199529086 + MGP_CBAJ_P0059350 Ogfr protein_coding protein_coding MGP_CBAJ_T0059351.1 MGP_CBAJ_G0026690.1 mouse_genomes_project 2 199522737 199527125 + Ogfr protein_coding retained_intron MGP_CBAJ_T0007167.1 MGP_CBAJ_G0005872.1 mouse_genomes_project 2 102508533 102526903 - lincRNA lincRNA MGP_CBAJ_T0007168.1 MGP_CBAJ_G0005872.1 mouse_genomes_project 2 102517595 102526922 - lincRNA lincRNA MGP_CBAJ_T0058673.1 MGP_CBAJ_G0026515.1 mouse_genomes_project 2 179965965 179982892 - MGP_CBAJ_P0058673 Oser1 protein_coding protein_coding MGP_CBAJ_T0058674.1 MGP_CBAJ_G0026515.1 mouse_genomes_project 2 179965996 179988077 - MGP_CBAJ_P0058674 Oser1 protein_coding protein_coding MGP_CBAJ_T0058675.1 MGP_CBAJ_G0026515.1 mouse_genomes_project 2 179966695 179982508 - Oser1 protein_coding processed_transcript MGP_CBAJ_T0058676.1 MGP_CBAJ_G0026515.1 mouse_genomes_project 2 179966729 179975053 - Oser1 protein_coding processed_transcript MGP_CBAJ_T0058677.1 MGP_CBAJ_G0026515.1 mouse_genomes_project 2 179967024 179988077 - Oser1 protein_coding processed_transcript MGP_CBAJ_T0058678.1 MGP_CBAJ_G0026515.1 mouse_genomes_project 2 179967213 179980490 - MGP_CBAJ_P0058678 Oser1 protein_coding protein_coding MGP_CBAJ_T0058679.1 MGP_CBAJ_G0026515.1 mouse_genomes_project 2 179986256 179987930 - Oser1 protein_coding processed_transcript MGP_CBAJ_T0059047.1 MGP_CBAJ_G0026608.1 mouse_genomes_project 2 184809960 184826500 - MGP_CBAJ_P0059047 Spata2 protein_coding protein_coding MGP_CBAJ_T0059048.1 MGP_CBAJ_G0026608.1 mouse_genomes_project 2 184810261 184826458 - MGP_CBAJ_P0059048 Spata2 protein_coding protein_coding MGP_CBAJ_T0059049.1 MGP_CBAJ_G0026608.1 mouse_genomes_project 2 184818133 184819444 - Spata2 protein_coding retained_intron MGP_CBAJ_T0059050.1 MGP_CBAJ_G0026608.1 mouse_genomes_project 2 184818968 184826485 - Spata2 protein_coding processed_transcript MGP_CBAJ_T0059051.1 MGP_CBAJ_G0026608.1 mouse_genomes_project 2 184819019 184826458 - Spata2 protein_coding processed_transcript MGP_CBAJ_T0059052.1 MGP_CBAJ_G0026608.1 mouse_genomes_project 2 184819126 184826491 - Spata2 protein_coding processed_transcript MGP_CBAJ_T0010269.1 MGP_CBAJ_G0008407.1 mouse_genomes_project 2 30536289 30536385 + miRNA miRNA MGP_CBAJ_T0003818.1 MGP_CBAJ_G0003413.1 mouse_genomes_project 2 3600843 3745461 + A230108P19Rik antisense antisense MGP_CBAJ_T0013274.1 MGP_CBAJ_G0011386.1 mouse_genomes_project 2 18985619 18987050 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057085.1 MGP_CBAJ_G0026147.1 mouse_genomes_project 2 139395556 139416501 + Blvra protein_coding retained_intron MGP_CBAJ_T0057086.1 MGP_CBAJ_G0026147.1 mouse_genomes_project 2 139395558 139425743 + MGP_CBAJ_P0057086 Blvra protein_coding protein_coding MGP_CBAJ_T0057087.1 MGP_CBAJ_G0026147.1 mouse_genomes_project 2 139395570 139418960 + MGP_CBAJ_P0057087 Blvra protein_coding protein_coding MGP_CBAJ_T0057088.1 MGP_CBAJ_G0026147.1 mouse_genomes_project 2 139395584 139416050 + MGP_CBAJ_P0057088 Blvra protein_coding protein_coding MGP_CBAJ_T0057089.1 MGP_CBAJ_G0026147.1 mouse_genomes_project 2 139405834 139420778 + MGP_CBAJ_P0057089 Blvra protein_coding protein_coding MGP_CBAJ_T0054065.1 MGP_CBAJ_G0025366.1 mouse_genomes_project 2 36331519 36358336 - MGP_CBAJ_P0054065 4930402F06Rik protein_coding protein_coding MGP_CBAJ_T0054066.1 MGP_CBAJ_G0025366.1 mouse_genomes_project 2 36331539 36358218 - MGP_CBAJ_P0054066 4930402F06Rik protein_coding protein_coding MGP_CBAJ_T0057713.1 MGP_CBAJ_G0026294.1 mouse_genomes_project 2 160116713 160129978 + MGP_CBAJ_P0057713 Naa20 protein_coding protein_coding MGP_CBAJ_T0057714.1 MGP_CBAJ_G0026294.1 mouse_genomes_project 2 160116725 160129104 + MGP_CBAJ_P0057714 Naa20 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057715.1 MGP_CBAJ_G0026294.1 mouse_genomes_project 2 160116729 160129110 + MGP_CBAJ_P0057715 Naa20 protein_coding protein_coding MGP_CBAJ_T0057716.1 MGP_CBAJ_G0026294.1 mouse_genomes_project 2 160116734 160129184 + MGP_CBAJ_P0057716 Naa20 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057717.1 MGP_CBAJ_G0026294.1 mouse_genomes_project 2 160116766 160123942 + MGP_CBAJ_P0057717 Naa20 protein_coding protein_coding MGP_CBAJ_T0057718.1 MGP_CBAJ_G0026294.1 mouse_genomes_project 2 160116769 160125547 + Naa20 protein_coding retained_intron MGP_CBAJ_T0057719.1 MGP_CBAJ_G0026294.1 mouse_genomes_project 2 160116782 160129442 + MGP_CBAJ_P0057719 Naa20 protein_coding protein_coding MGP_CBAJ_T0057720.1 MGP_CBAJ_G0026294.1 mouse_genomes_project 2 160125437 160129287 + Naa20 protein_coding retained_intron MGP_CBAJ_T0013327.1 MGP_CBAJ_G0011439.1 mouse_genomes_project 2 40606552 40607317 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013533.1 MGP_CBAJ_G0011645.1 mouse_genomes_project 2 118438339 118439270 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013338.1 MGP_CBAJ_G0011450.1 mouse_genomes_project 2 46873778 46876465 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0052886.1 MGP_CBAJ_G0025185.1 mouse_genomes_project 2 25361240 25365494 - MGP_CBAJ_P0052886 Sohlh1 protein_coding protein_coding MGP_CBAJ_T0058716.1 MGP_CBAJ_G0026527.1 mouse_genomes_project 2 180578320 180603450 + MGP_CBAJ_P0058716 Ywhab protein_coding protein_coding MGP_CBAJ_T0058717.1 MGP_CBAJ_G0026527.1 mouse_genomes_project 2 180578869 180600108 + MGP_CBAJ_P0058717 Ywhab protein_coding protein_coding MGP_CBAJ_T0007130.1 MGP_CBAJ_G0005842.1 mouse_genomes_project 2 79471467 79472017 + Gm28640 lincRNA lincRNA MGP_CBAJ_T0058932.1 MGP_CBAJ_G0026590.1 mouse_genomes_project 2 182404564 182411059 - MGP_CBAJ_P0058932 Trp53rka protein_coding protein_coding MGP_CBAJ_T0058933.1 MGP_CBAJ_G0026590.1 mouse_genomes_project 2 182408901 182410851 - Trp53rka protein_coding processed_transcript MGP_CBAJ_T0100368.1 MGP_CBAJ_G0038623.1 mouse_genomes_project 2 65086852 65086984 + Gm26422 snoRNA snoRNA MGP_CBAJ_T0053362.1 MGP_CBAJ_G0025262.1 mouse_genomes_project 2 30133973 30159656 - MGP_CBAJ_P0053362 Wdr34 protein_coding protein_coding MGP_CBAJ_T0053363.1 MGP_CBAJ_G0025262.1 mouse_genomes_project 2 30134339 30134933 - Wdr34 protein_coding retained_intron MGP_CBAJ_T0053364.1 MGP_CBAJ_G0025262.1 mouse_genomes_project 2 30136221 30137474 - Wdr34 protein_coding retained_intron MGP_CBAJ_T0053365.1 MGP_CBAJ_G0025262.1 mouse_genomes_project 2 30157943 30159636 - Wdr34 protein_coding processed_transcript MGP_CBAJ_T0057895.1 MGP_CBAJ_G0026343.1 mouse_genomes_project 2 166865662 166902041 + MGP_CBAJ_P0057895 Angpt4 protein_coding protein_coding MGP_CBAJ_T0054098.1 MGP_CBAJ_G0025372.1 mouse_genomes_project 2 37139393 37162723 - MGP_CBAJ_P0054098 Lhx6 protein_coding protein_coding MGP_CBAJ_T0054099.1 MGP_CBAJ_G0025372.1 mouse_genomes_project 2 37139393 37163933 - MGP_CBAJ_P0054099 Lhx6 protein_coding protein_coding MGP_CBAJ_T0054100.1 MGP_CBAJ_G0025372.1 mouse_genomes_project 2 37139393 37164070 - MGP_CBAJ_P0054100 Lhx6 protein_coding protein_coding MGP_CBAJ_T0054101.1 MGP_CBAJ_G0025372.1 mouse_genomes_project 2 37139393 37162723 - MGP_CBAJ_P0054101 Lhx6 protein_coding protein_coding MGP_CBAJ_T0054102.1 MGP_CBAJ_G0025372.1 mouse_genomes_project 2 37139394 37164070 - MGP_CBAJ_P0054102 Lhx6 protein_coding protein_coding MGP_CBAJ_T0054103.1 MGP_CBAJ_G0025372.1 mouse_genomes_project 2 37141125 37151715 - MGP_CBAJ_P0054103 Lhx6 protein_coding protein_coding MGP_CBAJ_T0054104.1 MGP_CBAJ_G0025372.1 mouse_genomes_project 2 37141128 37163553 - MGP_CBAJ_P0054104 Lhx6 protein_coding protein_coding MGP_CBAJ_T0054105.1 MGP_CBAJ_G0025372.1 mouse_genomes_project 2 37151666 37162255 - Lhx6 protein_coding retained_intron MGP_CBAJ_T0054106.1 MGP_CBAJ_G0025372.1 mouse_genomes_project 2 37159960 37163917 - Lhx6 protein_coding processed_transcript MGP_CBAJ_T0057521.1 MGP_CBAJ_G0026248.1 mouse_genomes_project 2 145923716 145936272 - MGP_CBAJ_P0057521 Lrrn4 protein_coding protein_coding MGP_CBAJ_T0099115.1 MGP_CBAJ_G0037370.1 mouse_genomes_project 2 91184915 91185016 + Gm27942 snRNA snRNA MGP_CBAJ_T0056477.1 MGP_CBAJ_G0026025.1 mouse_genomes_project 2 130190141 130195120 + MGP_CBAJ_P0056477 Rpusd2 protein_coding protein_coding MGP_CBAJ_T0057790.1 MGP_CBAJ_G0026316.1 mouse_genomes_project 2 163407254 163420604 + MGP_CBAJ_P0057790 Cst13 protein_coding protein_coding MGP_CBAJ_T0013566.1 MGP_CBAJ_G0011678.1 mouse_genomes_project 2 139963243 139964093 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0056955.1 MGP_CBAJ_G0026119.1 mouse_genomes_project 2 134538498 134592759 + MGP_CBAJ_P0056955 Sqrdl protein_coding protein_coding MGP_CBAJ_T0056956.1 MGP_CBAJ_G0026119.1 mouse_genomes_project 2 134538650 134565087 + MGP_CBAJ_P0056956 Sqrdl protein_coding protein_coding MGP_CBAJ_T0056957.1 MGP_CBAJ_G0026119.1 mouse_genomes_project 2 134538652 134565094 + MGP_CBAJ_P0056957 Sqrdl protein_coding protein_coding MGP_CBAJ_T0056958.1 MGP_CBAJ_G0026119.1 mouse_genomes_project 2 134538670 134541802 + Sqrdl protein_coding processed_transcript MGP_CBAJ_T0056959.1 MGP_CBAJ_G0026119.1 mouse_genomes_project 2 134546975 134582727 + Sqrdl protein_coding retained_intron MGP_CBAJ_T0056960.1 MGP_CBAJ_G0026119.1 mouse_genomes_project 2 134561981 134592743 + MGP_CBAJ_P0056960 Sqrdl protein_coding protein_coding MGP_CBAJ_T0056961.1 MGP_CBAJ_G0026119.1 mouse_genomes_project 2 134564942 134567962 + Sqrdl protein_coding processed_transcript MGP_CBAJ_T0056962.1 MGP_CBAJ_G0026119.1 mouse_genomes_project 2 134564959 134592528 + MGP_CBAJ_P0056962 Sqrdl protein_coding nonsense_mediated_decay MGP_CBAJ_T0056963.1 MGP_CBAJ_G0026119.1 mouse_genomes_project 2 134581714 134592749 + MGP_CBAJ_P0056963 Sqrdl protein_coding protein_coding MGP_CBAJ_T0055129.1 MGP_CBAJ_G0025585.1 mouse_genomes_project 2 82847720 82932861 - MGP_CBAJ_P0055129 Sestd1 protein_coding protein_coding MGP_CBAJ_T0055130.1 MGP_CBAJ_G0025585.1 mouse_genomes_project 2 82853977 82910593 - MGP_CBAJ_P0055130 Sestd1 protein_coding unknown_likely_coding MGP_CBAJ_T0055131.1 MGP_CBAJ_G0025585.1 mouse_genomes_project 2 82854825 82947569 - MGP_CBAJ_P0055131 Sestd1 protein_coding protein_coding MGP_CBAJ_T0055132.1 MGP_CBAJ_G0025585.1 mouse_genomes_project 2 82855458 82910702 - MGP_CBAJ_P0055132 Sestd1 protein_coding unknown_likely_coding MGP_CBAJ_T0055133.1 MGP_CBAJ_G0025585.1 mouse_genomes_project 2 82865155 82867698 - Sestd1 protein_coding processed_transcript MGP_CBAJ_T0055134.1 MGP_CBAJ_G0025585.1 mouse_genomes_project 2 82865157 82947566 - Sestd1 protein_coding processed_transcript MGP_CBAJ_T0100374.1 MGP_CBAJ_G0038629.1 mouse_genomes_project 2 86737192 86737319 + Gm25420 snoRNA snoRNA MGP_CBAJ_T0054150.1 MGP_CBAJ_G0025404.1 mouse_genomes_project 2 38461260 38475872 - MGP_CBAJ_P0054150 Pdcl protein_coding protein_coding MGP_CBAJ_T0054151.1 MGP_CBAJ_G0025404.1 mouse_genomes_project 2 38461774 38475793 - MGP_CBAJ_P0054151 Pdcl protein_coding protein_coding MGP_CBAJ_T0054152.1 MGP_CBAJ_G0025404.1 mouse_genomes_project 2 38463305 38475729 - MGP_CBAJ_P0054152 Pdcl protein_coding nonsense_mediated_decay MGP_CBAJ_T0054153.1 MGP_CBAJ_G0025404.1 mouse_genomes_project 2 38463344 38475736 - MGP_CBAJ_P0054153 Pdcl protein_coding protein_coding MGP_CBAJ_T0004012.1 MGP_CBAJ_G0003552.1 mouse_genomes_project 2 142185962 142186984 - Gm14041 antisense antisense MGP_CBAJ_T0058741.1 MGP_CBAJ_G0026537.1 mouse_genomes_project 2 180879703 180881981 - MGP_CBAJ_P0058741 protein_coding protein_coding MGP_CBAJ_T0013590.1 MGP_CBAJ_G0011702.1 mouse_genomes_project 2 146118147 146118513 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057196.1 MGP_CBAJ_G0026174.1 mouse_genomes_project 2 141196889 141315814 + MGP_CBAJ_P0057196 Mertk protein_coding protein_coding MGP_CBAJ_T0057197.1 MGP_CBAJ_G0026174.1 mouse_genomes_project 2 141273927 141315600 + Mertk protein_coding processed_transcript MGP_CBAJ_T0058744.1 MGP_CBAJ_G0026540.1 mouse_genomes_project 2 180990635 180992618 + MGP_CBAJ_P0058744 Svs6 protein_coding protein_coding MGP_CBAJ_T0013679.1 MGP_CBAJ_G0011791.1 mouse_genomes_project 2 183000793 183001355 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055364.1 MGP_CBAJ_G0025641.1 mouse_genomes_project 2 92055067 92092145 - MGP_CBAJ_P0055364 4833423E24Rik protein_coding protein_coding MGP_CBAJ_T0007031.1 MGP_CBAJ_G0005764.1 mouse_genomes_project 2 5286490 5350702 - Gm13211 lincRNA lincRNA MGP_CBAJ_T0099134.1 MGP_CBAJ_G0037389.1 mouse_genomes_project 2 149362812 149362913 - Gm26227 snRNA snRNA MGP_CBAJ_T0010234.1 MGP_CBAJ_G0008372.1 mouse_genomes_project 2 8388906 8389015 + Mir297b miRNA miRNA MGP_CBAJ_T0010314.1 MGP_CBAJ_G0008452.1 mouse_genomes_project 2 102517929 102518029 - Mir670 miRNA miRNA MGP_CBAJ_T0007296.1 MGP_CBAJ_G0005977.1 mouse_genomes_project 2 184349403 184352436 - lincRNA lincRNA MGP_CBAJ_T0007297.1 MGP_CBAJ_G0005977.1 mouse_genomes_project 2 184350294 184351780 - lincRNA lincRNA MGP_CBAJ_T0052930.1 MGP_CBAJ_G0025190.1 mouse_genomes_project 2 25765560 25773638 - MGP_CBAJ_P0052930 Lhx3 protein_coding protein_coding MGP_CBAJ_T0052931.1 MGP_CBAJ_G0025190.1 mouse_genomes_project 2 25765564 25768215 - Lhx3 protein_coding retained_intron MGP_CBAJ_T0052932.1 MGP_CBAJ_G0025190.1 mouse_genomes_project 2 25765564 25771924 - MGP_CBAJ_P0052932 Lhx3 protein_coding protein_coding MGP_CBAJ_T0052933.1 MGP_CBAJ_G0025190.1 mouse_genomes_project 2 25767824 25768790 - Lhx3 protein_coding retained_intron MGP_CBAJ_T0053728.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32938488 32966841 + MGP_CBAJ_P0053728 Ciz1 protein_coding protein_coding MGP_CBAJ_T0053729.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32949346 32953744 + Ciz1 protein_coding processed_transcript MGP_CBAJ_T0053730.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32949346 32953865 + MGP_CBAJ_P0053730 Ciz1 protein_coding protein_coding MGP_CBAJ_T0053731.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32949397 32956459 + MGP_CBAJ_P0053731 Ciz1 protein_coding protein_coding MGP_CBAJ_T0053732.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32949534 32966847 + MGP_CBAJ_P0053732 Ciz1 protein_coding protein_coding MGP_CBAJ_T0053733.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32949534 32966841 + MGP_CBAJ_P0053733 Ciz1 protein_coding protein_coding MGP_CBAJ_T0053734.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32949689 32969510 + Ciz1 protein_coding retained_intron MGP_CBAJ_T0053735.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32949769 32952188 + Ciz1 protein_coding processed_transcript MGP_CBAJ_T0053736.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32949890 32956660 + MGP_CBAJ_P0053736 Ciz1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053737.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32950092 32951324 + Ciz1 protein_coding retained_intron MGP_CBAJ_T0053738.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32950141 32966847 + MGP_CBAJ_P0053738 Ciz1 protein_coding protein_coding MGP_CBAJ_T0053739.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32950146 32966842 + MGP_CBAJ_P0053739 Ciz1 protein_coding protein_coding MGP_CBAJ_T0053740.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32951681 32953851 + Ciz1 protein_coding retained_intron MGP_CBAJ_T0053741.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32953748 32957630 + MGP_CBAJ_P0053741 Ciz1 protein_coding protein_coding MGP_CBAJ_T0053742.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32953808 32958642 + MGP_CBAJ_P0053742 Ciz1 protein_coding protein_coding MGP_CBAJ_T0053743.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32956398 32958087 + Ciz1 protein_coding processed_transcript MGP_CBAJ_T0053744.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32957245 32964082 + MGP_CBAJ_P0053744 Ciz1 protein_coding protein_coding MGP_CBAJ_T0053745.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32958171 32963100 + Ciz1 protein_coding retained_intron MGP_CBAJ_T0053746.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32958653 32963544 + Ciz1 protein_coding retained_intron MGP_CBAJ_T0053747.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32962752 32966843 + Ciz1 protein_coding retained_intron MGP_CBAJ_T0053748.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32963651 32964934 + Ciz1 protein_coding retained_intron MGP_CBAJ_T0053749.1 MGP_CBAJ_G0025315.1 mouse_genomes_project 2 32964032 32968766 + MGP_CBAJ_P0053749 Ciz1 protein_coding protein_coding MGP_CBAJ_T0057206.1 MGP_CBAJ_G0026177.1 mouse_genomes_project 2 141475352 141496637 - MGP_CBAJ_P0057206 Zc3h8 protein_coding protein_coding MGP_CBAJ_T0053758.1 MGP_CBAJ_G0025318.1 mouse_genomes_project 2 32985374 32995625 + MGP_CBAJ_P0053758 Ptges2 protein_coding protein_coding MGP_CBAJ_T0053759.1 MGP_CBAJ_G0025318.1 mouse_genomes_project 2 32985918 32990876 + MGP_CBAJ_P0053759 Ptges2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053760.1 MGP_CBAJ_G0025318.1 mouse_genomes_project 2 32986950 32991429 + Ptges2 protein_coding retained_intron MGP_CBAJ_T0013399.1 MGP_CBAJ_G0011511.1 mouse_genomes_project 2 69547670 69548862 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101781.1 MGP_CBAJ_G0039812.1 mouse_genomes_project 2 37411976 37412429 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0098304.1 MGP_CBAJ_G0036571.1 mouse_genomes_project 2 1220057 1223701 + Gm37814 sense_intronic sense_intronic MGP_CBAJ_T0013618.1 MGP_CBAJ_G0011730.1 mouse_genomes_project 2 161225841 161226678 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0017501.1 MGP_CBAJ_G0015150.1 mouse_genomes_project 2 29791380 29793712 - processed_transcript processed_transcript MGP_CBAJ_T0007210.1 MGP_CBAJ_G0005906.1 mouse_genomes_project 2 129187166 129187763 - Gm29233 lincRNA lincRNA MGP_CBAJ_T0013429.1 MGP_CBAJ_G0011541.1 mouse_genomes_project 2 81348890 81349656 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0058052.1 MGP_CBAJ_G0026394.1 mouse_genomes_project 2 169052757 169094314 + MGP_CBAJ_P0058052 Mapre1 protein_coding protein_coding MGP_CBAJ_T0058053.1 MGP_CBAJ_G0026394.1 mouse_genomes_project 2 169053085 169077289 + Mapre1 protein_coding processed_transcript MGP_CBAJ_T0058054.1 MGP_CBAJ_G0026394.1 mouse_genomes_project 2 169056876 169075285 + Mapre1 protein_coding processed_transcript MGP_CBAJ_T0052004.1 MGP_CBAJ_G0025026.1 mouse_genomes_project 2 1764597 1796756 - MGP_CBAJ_P0052004 Prpf18 protein_coding unknown_likely_coding MGP_CBAJ_T0052005.1 MGP_CBAJ_G0025026.1 mouse_genomes_project 2 1764597 1796861 - MGP_CBAJ_P0052005 Prpf18 protein_coding protein_coding MGP_CBAJ_T0052006.1 MGP_CBAJ_G0025026.1 mouse_genomes_project 2 1766476 1796881 - Prpf18 protein_coding processed_transcript MGP_CBAJ_T0052007.1 MGP_CBAJ_G0025026.1 mouse_genomes_project 2 1766567 1796888 - MGP_CBAJ_P0052007 Prpf18 protein_coding protein_coding MGP_CBAJ_T0052008.1 MGP_CBAJ_G0025026.1 mouse_genomes_project 2 1781444 1796856 - MGP_CBAJ_P0052008 Prpf18 protein_coding protein_coding MGP_CBAJ_T0052009.1 MGP_CBAJ_G0025026.1 mouse_genomes_project 2 1781468 1796862 - Prpf18 protein_coding processed_transcript MGP_CBAJ_T0052010.1 MGP_CBAJ_G0025026.1 mouse_genomes_project 2 1785987 1796878 - Prpf18 protein_coding processed_transcript MGP_CBAJ_T0013585.1 MGP_CBAJ_G0011697.1 mouse_genomes_project 2 145035770 145036758 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100347.1 MGP_CBAJ_G0038602.1 mouse_genomes_project 2 26612940 26613014 + Gm23969 snoRNA snoRNA MGP_CBAJ_T0013693.1 MGP_CBAJ_G0011805.1 mouse_genomes_project 2 192921090 192921451 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0053016.1 MGP_CBAJ_G0025203.1 mouse_genomes_project 2 26183091 26194102 + MGP_CBAJ_P0053016 Egfl7 protein_coding protein_coding MGP_CBAJ_T0053017.1 MGP_CBAJ_G0025203.1 mouse_genomes_project 2 26184133 26197402 + MGP_CBAJ_P0053017 Egfl7 protein_coding protein_coding MGP_CBAJ_T0053018.1 MGP_CBAJ_G0025203.1 mouse_genomes_project 2 26186938 26197399 + MGP_CBAJ_P0053018 Egfl7 protein_coding protein_coding MGP_CBAJ_T0053019.1 MGP_CBAJ_G0025203.1 mouse_genomes_project 2 26186954 26197400 + MGP_CBAJ_P0053019 Egfl7 protein_coding protein_coding MGP_CBAJ_T0053020.1 MGP_CBAJ_G0025203.1 mouse_genomes_project 2 26186979 26197838 + MGP_CBAJ_P0053020 Egfl7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053021.1 MGP_CBAJ_G0025203.1 mouse_genomes_project 2 26191347 26197399 + MGP_CBAJ_P0053021 Egfl7 protein_coding protein_coding MGP_CBAJ_T0053023.1 MGP_CBAJ_G0025203.1 mouse_genomes_project 2 26191378 26195626 + Egfl7 protein_coding processed_transcript MGP_CBAJ_T0053024.1 MGP_CBAJ_G0025203.1 mouse_genomes_project 2 26191389 26195657 + MGP_CBAJ_P0053024 Egfl7 protein_coding protein_coding MGP_CBAJ_T0053025.1 MGP_CBAJ_G0025203.1 mouse_genomes_project 2 26191406 26195207 + MGP_CBAJ_P0053025 Egfl7 protein_coding protein_coding MGP_CBAJ_T0053026.1 MGP_CBAJ_G0025203.1 mouse_genomes_project 2 26193260 26197161 + MGP_CBAJ_P0053026 Egfl7 protein_coding protein_coding MGP_CBAJ_T0053027.1 MGP_CBAJ_G0025203.1 mouse_genomes_project 2 26194052 26196281 + Egfl7 protein_coding retained_intron MGP_CBAJ_T0053028.1 MGP_CBAJ_G0025203.1 mouse_genomes_project 2 26195237 26195690 + Egfl7 protein_coding retained_intron MGP_CBAJ_T0053029.1 MGP_CBAJ_G0025203.1 mouse_genomes_project 2 26195682 26197394 + MGP_CBAJ_P0053029 Egfl7 protein_coding protein_coding MGP_CBAJ_T0053030.1 MGP_CBAJ_G0025203.1 mouse_genomes_project 2 26195746 26197400 + MGP_CBAJ_P0053030 Egfl7 protein_coding protein_coding MGP_CBAJ_T0053031.1 MGP_CBAJ_G0025203.1 mouse_genomes_project 2 26196151 26197400 + MGP_CBAJ_P0053031 Egfl7 protein_coding protein_coding MGP_CBAJ_T0053032.1 MGP_CBAJ_G0025203.1 mouse_genomes_project 2 26196152 26197400 + MGP_CBAJ_P0053032 Egfl7 protein_coding protein_coding MGP_CBAJ_T0053033.1 MGP_CBAJ_G0025203.1 mouse_genomes_project 2 26196163 26197008 + Egfl7 protein_coding retained_intron MGP_CBAJ_T0053034.1 MGP_CBAJ_G0025203.1 mouse_genomes_project 2 26196740 26197399 + Egfl7 protein_coding processed_transcript MGP_CBAJ_T0053035.1 MGP_CBAJ_G0025203.1 mouse_genomes_project 2 26196864 26197400 + Egfl7 protein_coding retained_intron MGP_CBAJ_T0007053.1 MGP_CBAJ_G0005781.1 mouse_genomes_project 2 23877648 23902495 - Gm13417 lincRNA lincRNA MGP_CBAJ_T0058763.1 MGP_CBAJ_G0026547.1 mouse_genomes_project 2 181165924 181206830 + MGP_CBAJ_P0058763 Gm20458 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052774.1 MGP_CBAJ_G0025157.1 mouse_genomes_project 2 24891675 24893592 + MGP_CBAJ_P0052774 Fut7 protein_coding protein_coding MGP_CBAJ_T0052775.1 MGP_CBAJ_G0025157.1 mouse_genomes_project 2 24891787 24894780 + MGP_CBAJ_P0052775 Fut7 protein_coding protein_coding MGP_CBAJ_T0052776.1 MGP_CBAJ_G0025157.1 mouse_genomes_project 2 24891961 24894783 + MGP_CBAJ_P0052776 Fut7 protein_coding protein_coding MGP_CBAJ_T0052777.1 MGP_CBAJ_G0025157.1 mouse_genomes_project 2 24892102 24894783 + MGP_CBAJ_P0052777 Fut7 protein_coding protein_coding MGP_CBAJ_T0052778.1 MGP_CBAJ_G0025157.1 mouse_genomes_project 2 24893056 24893500 + Fut7 protein_coding processed_transcript MGP_CBAJ_T0055179.1 MGP_CBAJ_G0025591.1 mouse_genomes_project 2 85337664 85341894 - MGP_CBAJ_P0055179 Neurod1 protein_coding protein_coding MGP_CBAJ_T0003842.1 MGP_CBAJ_G0003435.1 mouse_genomes_project 2 25092653 25122229 + Fcnaos antisense antisense MGP_CBAJ_T0003843.1 MGP_CBAJ_G0003435.1 mouse_genomes_project 2 25103301 25122229 + Fcnaos antisense antisense MGP_CBAJ_T0003844.1 MGP_CBAJ_G0003435.1 mouse_genomes_project 2 25118118 25122230 + Fcnaos antisense antisense MGP_CBAJ_T0003845.1 MGP_CBAJ_G0003435.1 mouse_genomes_project 2 25121115 25122232 + Fcnaos antisense antisense MGP_CBAJ_T0057266.1 MGP_CBAJ_G0026196.1 mouse_genomes_project 2 142969679 142976348 + protein_coding retained_intron MGP_CBAJ_T0057267.1 MGP_CBAJ_G0026196.1 mouse_genomes_project 2 142969681 142975175 + protein_coding retained_intron MGP_CBAJ_T0057268.1 MGP_CBAJ_G0026196.1 mouse_genomes_project 2 142969690 142973800 + MGP_CBAJ_P0057268 protein_coding protein_coding MGP_CBAJ_T0057269.1 MGP_CBAJ_G0026196.1 mouse_genomes_project 2 142969709 142974693 + MGP_CBAJ_P0057269 protein_coding unknown_likely_coding MGP_CBAJ_T0057270.1 MGP_CBAJ_G0026196.1 mouse_genomes_project 2 142969727 142971332 + MGP_CBAJ_P0057270 protein_coding protein_coding MGP_CBAJ_T0057271.1 MGP_CBAJ_G0026196.1 mouse_genomes_project 2 142970066 142970930 + protein_coding retained_intron MGP_CBAJ_T0057272.1 MGP_CBAJ_G0026196.1 mouse_genomes_project 2 142971029 142971500 + protein_coding retained_intron MGP_CBAJ_T0057273.1 MGP_CBAJ_G0026196.1 mouse_genomes_project 2 142971392 142975175 + MGP_CBAJ_P0057273 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057274.1 MGP_CBAJ_G0026196.1 mouse_genomes_project 2 142971533 142973833 + protein_coding retained_intron MGP_CBAJ_T0057275.1 MGP_CBAJ_G0026196.1 mouse_genomes_project 2 142971708 142974218 + protein_coding retained_intron MGP_CBAJ_T0057276.1 MGP_CBAJ_G0026196.1 mouse_genomes_project 2 142971830 142974222 + MGP_CBAJ_P0057276 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057277.1 MGP_CBAJ_G0026196.1 mouse_genomes_project 2 142971898 142973545 + protein_coding retained_intron MGP_CBAJ_T0057278.1 MGP_CBAJ_G0026196.1 mouse_genomes_project 2 142972455 142974726 + protein_coding retained_intron MGP_CBAJ_T0057279.1 MGP_CBAJ_G0026196.1 mouse_genomes_project 2 142973577 142974493 + MGP_CBAJ_P0057279 protein_coding protein_coding MGP_CBAJ_T0007156.1 MGP_CBAJ_G0005864.1 mouse_genomes_project 2 99085891 99091144 - Gm17281 lincRNA lincRNA MGP_CBAJ_T0055411.1 MGP_CBAJ_G0025686.1 mouse_genomes_project 2 93503418 93504360 - MGP_CBAJ_P0055411 Olfr1087 protein_coding protein_coding MGP_CBAJ_T0052698.1 MGP_CBAJ_G0025144.1 mouse_genomes_project 2 24694719 24695573 + MGP_CBAJ_P0052698 Tmem203 protein_coding protein_coding MGP_CBAJ_T0101776.1 MGP_CBAJ_G0039807.1 mouse_genomes_project 2 23565380 23568941 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010275.1 MGP_CBAJ_G0008413.1 mouse_genomes_project 2 32902591 32902701 + Mir199b miRNA miRNA MGP_CBAJ_T0013581.1 MGP_CBAJ_G0011693.1 mouse_genomes_project 2 144260279 144260604 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017632.1 MGP_CBAJ_G0015223.1 mouse_genomes_project 2 168564691 168569445 - 2500004C02Rik processed_transcript processed_transcript MGP_CBAJ_T0017633.1 MGP_CBAJ_G0015223.1 mouse_genomes_project 2 168566050 168566757 - 2500004C02Rik processed_transcript processed_transcript MGP_CBAJ_T0017634.1 MGP_CBAJ_G0015223.1 mouse_genomes_project 2 168566170 168569708 - 2500004C02Rik processed_transcript processed_transcript MGP_CBAJ_T0013596.1 MGP_CBAJ_G0011708.1 mouse_genomes_project 2 152475027 152475341 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013254.1 MGP_CBAJ_G0011366.1 mouse_genomes_project 2 13795180 13795976 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0057237.1 MGP_CBAJ_G0026189.1 mouse_genomes_project 2 142215483 142234556 + Sirpa protein_coding processed_transcript MGP_CBAJ_T0057238.1 MGP_CBAJ_G0026189.1 mouse_genomes_project 2 142215487 142234559 + Sirpa protein_coding processed_transcript MGP_CBAJ_T0057239.1 MGP_CBAJ_G0026189.1 mouse_genomes_project 2 142215487 142255919 + MGP_CBAJ_P0057239 Sirpa protein_coding protein_coding MGP_CBAJ_T0057240.1 MGP_CBAJ_G0026189.1 mouse_genomes_project 2 142215487 142239964 + MGP_CBAJ_P0057240 Sirpa protein_coding protein_coding MGP_CBAJ_T0057241.1 MGP_CBAJ_G0026189.1 mouse_genomes_project 2 142215487 142255919 + MGP_CBAJ_P0057241 Sirpa protein_coding protein_coding MGP_CBAJ_T0057242.1 MGP_CBAJ_G0026189.1 mouse_genomes_project 2 142215513 142234748 + Sirpa protein_coding processed_transcript MGP_CBAJ_T0057243.1 MGP_CBAJ_G0026189.1 mouse_genomes_project 2 142215562 142255927 + MGP_CBAJ_P0057243 Sirpa protein_coding protein_coding MGP_CBAJ_T0057244.1 MGP_CBAJ_G0026189.1 mouse_genomes_project 2 142215843 142255919 + MGP_CBAJ_P0057244 Sirpa protein_coding protein_coding MGP_CBAJ_T0057245.1 MGP_CBAJ_G0026189.1 mouse_genomes_project 2 142215853 142255927 + MGP_CBAJ_P0057245 Sirpa protein_coding protein_coding MGP_CBAJ_T0057246.1 MGP_CBAJ_G0026189.1 mouse_genomes_project 2 142216203 142255927 + MGP_CBAJ_P0057246 Sirpa protein_coding protein_coding MGP_CBAJ_T0057247.1 MGP_CBAJ_G0026189.1 mouse_genomes_project 2 142216210 142254288 + Sirpa protein_coding processed_transcript MGP_CBAJ_T0057248.1 MGP_CBAJ_G0026189.1 mouse_genomes_project 2 142216216 142253996 + MGP_CBAJ_P0057248 Sirpa protein_coding protein_coding MGP_CBAJ_T0057249.1 MGP_CBAJ_G0026189.1 mouse_genomes_project 2 142216261 142253883 + MGP_CBAJ_P0057249 Sirpa protein_coding protein_coding MGP_CBAJ_T0057250.1 MGP_CBAJ_G0026189.1 mouse_genomes_project 2 142244394 142251743 + Sirpa protein_coding retained_intron MGP_CBAJ_T0013677.1 MGP_CBAJ_G0011789.1 mouse_genomes_project 2 182608548 182608909 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001017.1 MGP_CBAJ_G0000949.1 mouse_genomes_project 2 13404617 13406554 + TEC TEC MGP_CBAJ_T0059241.1 MGP_CBAJ_G0026661.1 mouse_genomes_project 2 192896062 192907765 + MGP_CBAJ_P0059241 Nelfcd protein_coding protein_coding MGP_CBAJ_T0059242.1 MGP_CBAJ_G0026661.1 mouse_genomes_project 2 192896109 192907765 + MGP_CBAJ_P0059242 Nelfcd protein_coding protein_coding MGP_CBAJ_T0059243.1 MGP_CBAJ_G0026661.1 mouse_genomes_project 2 192896138 192902935 + Nelfcd protein_coding processed_transcript MGP_CBAJ_T0059244.1 MGP_CBAJ_G0026661.1 mouse_genomes_project 2 192903654 192905176 + Nelfcd protein_coding retained_intron MGP_CBAJ_T0059245.1 MGP_CBAJ_G0026661.1 mouse_genomes_project 2 192904942 192906211 + Nelfcd protein_coding retained_intron MGP_CBAJ_T0059246.1 MGP_CBAJ_G0026661.1 mouse_genomes_project 2 192906624 192907660 + Nelfcd protein_coding retained_intron MGP_CBAJ_T0098028.1 MGP_CBAJ_G0036301.1 mouse_genomes_project 2 183812854 183812970 - Gm23152 rRNA rRNA MGP_CBAJ_T0100379.1 MGP_CBAJ_G0038634.1 mouse_genomes_project 2 103105642 103105774 - Gm26396 snoRNA snoRNA MGP_CBAJ_T0057792.1 MGP_CBAJ_G0026318.1 mouse_genomes_project 2 163442910 163447134 - MGP_CBAJ_P0057792 9230104L09Rik protein_coding protein_coding MGP_CBAJ_T0057793.1 MGP_CBAJ_G0026318.1 mouse_genomes_project 2 163443103 163463811 - 9230104L09Rik protein_coding processed_transcript MGP_CBAJ_T0058212.1 MGP_CBAJ_G0026433.1 mouse_genomes_project 2 171148861 171172001 + MGP_CBAJ_P0058212 Myh7b protein_coding protein_coding MGP_CBAJ_T0058213.1 MGP_CBAJ_G0026433.1 mouse_genomes_project 2 171166747 171168075 + Myh7b protein_coding processed_transcript MGP_CBAJ_T0058214.1 MGP_CBAJ_G0026433.1 mouse_genomes_project 2 171171144 171171897 + Myh7b protein_coding retained_intron MGP_CBAJ_T0013260.1 MGP_CBAJ_G0011372.1 mouse_genomes_project 2 15842309 15843115 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055271.1 MGP_CBAJ_G0025612.1 mouse_genomes_project 2 91069318 91157128 - MGP_CBAJ_P0055271 protein_coding protein_coding MGP_CBAJ_T0010364.1 MGP_CBAJ_G0008502.1 mouse_genomes_project 2 192729912 192729994 - Mir298 miRNA miRNA MGP_CBAJ_T0054288.1 MGP_CBAJ_G0025429.1 mouse_genomes_project 2 46639222 46842656 - MGP_CBAJ_P0054288 Gtdc1 protein_coding protein_coding MGP_CBAJ_T0054289.1 MGP_CBAJ_G0025429.1 mouse_genomes_project 2 46639224 47009129 - MGP_CBAJ_P0054289 Gtdc1 protein_coding protein_coding MGP_CBAJ_T0054290.1 MGP_CBAJ_G0025429.1 mouse_genomes_project 2 46639940 46646068 - Gtdc1 protein_coding processed_transcript MGP_CBAJ_T0054291.1 MGP_CBAJ_G0025429.1 mouse_genomes_project 2 46645090 46646435 - Gtdc1 protein_coding processed_transcript MGP_CBAJ_T0054292.1 MGP_CBAJ_G0025429.1 mouse_genomes_project 2 46650200 47034266 - MGP_CBAJ_P0054292 Gtdc1 protein_coding protein_coding MGP_CBAJ_T0054293.1 MGP_CBAJ_G0025429.1 mouse_genomes_project 2 46716736 47034369 - Gtdc1 protein_coding processed_transcript MGP_CBAJ_T0054294.1 MGP_CBAJ_G0025429.1 mouse_genomes_project 2 46718871 47034762 - MGP_CBAJ_P0054294 Gtdc1 protein_coding protein_coding MGP_CBAJ_T0054295.1 MGP_CBAJ_G0025429.1 mouse_genomes_project 2 46838113 46906217 - Gtdc1 protein_coding processed_transcript MGP_CBAJ_T0054296.1 MGP_CBAJ_G0025429.1 mouse_genomes_project 2 46870994 47034341 - MGP_CBAJ_P0054296 Gtdc1 protein_coding protein_coding MGP_CBAJ_T0054297.1 MGP_CBAJ_G0025429.1 mouse_genomes_project 2 46874241 47034339 - Gtdc1 protein_coding processed_transcript MGP_CBAJ_T0054298.1 MGP_CBAJ_G0025429.1 mouse_genomes_project 2 46876706 47034254 - Gtdc1 protein_coding processed_transcript MGP_CBAJ_T0059158.1 MGP_CBAJ_G0026638.1 mouse_genomes_project 2 190559888 190565278 + MGP_CBAJ_P0059158 Cstf1 protein_coding protein_coding MGP_CBAJ_T0059159.1 MGP_CBAJ_G0026638.1 mouse_genomes_project 2 190559941 190571656 + MGP_CBAJ_P0059159 Cstf1 protein_coding protein_coding MGP_CBAJ_T0052160.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9497358 9585281 - MGP_CBAJ_P0052160 Pfkfb3 protein_coding protein_coding MGP_CBAJ_T0052161.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9497716 9527986 - MGP_CBAJ_P0052161 Pfkfb3 protein_coding protein_coding MGP_CBAJ_T0052162.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9497749 9527986 - MGP_CBAJ_P0052162 Pfkfb3 protein_coding protein_coding MGP_CBAJ_T0052163.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9497751 9527986 - MGP_CBAJ_P0052163 Pfkfb3 protein_coding protein_coding MGP_CBAJ_T0052164.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9497751 9585126 - MGP_CBAJ_P0052164 Pfkfb3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052165.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9497753 9524270 - Pfkfb3 protein_coding processed_transcript MGP_CBAJ_T0052166.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9500336 9527986 - MGP_CBAJ_P0052166 Pfkfb3 protein_coding protein_coding MGP_CBAJ_T0052167.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9500336 9527986 - MGP_CBAJ_P0052167 Pfkfb3 protein_coding protein_coding MGP_CBAJ_T0052168.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9500336 9527986 - MGP_CBAJ_P0052168 Pfkfb3 protein_coding protein_coding MGP_CBAJ_T0052169.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9500336 9527585 - MGP_CBAJ_P0052169 Pfkfb3 protein_coding protein_coding MGP_CBAJ_T0052170.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9501693 9527975 - MGP_CBAJ_P0052170 Pfkfb3 protein_coding protein_coding MGP_CBAJ_T0052171.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9501693 9527975 - MGP_CBAJ_P0052171 Pfkfb3 protein_coding protein_coding MGP_CBAJ_T0052172.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9503884 9527986 - MGP_CBAJ_P0052172 Pfkfb3 protein_coding protein_coding MGP_CBAJ_T0052173.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9503896 9527986 - MGP_CBAJ_P0052173 Pfkfb3 protein_coding protein_coding MGP_CBAJ_T0052174.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9505783 9527960 - Pfkfb3 protein_coding retained_intron MGP_CBAJ_T0052175.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9506893 9507995 - Pfkfb3 protein_coding retained_intron MGP_CBAJ_T0052176.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9516240 9527902 - Pfkfb3 protein_coding processed_transcript MGP_CBAJ_T0052177.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9518199 9527682 - Pfkfb3 protein_coding retained_intron MGP_CBAJ_T0052178.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9518499 9524236 - Pfkfb3 protein_coding processed_transcript MGP_CBAJ_T0052179.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9518526 9527181 - Pfkfb3 protein_coding retained_intron MGP_CBAJ_T0052180.1 MGP_CBAJ_G0025055.1 mouse_genomes_project 2 9519795 9526748 - Pfkfb3 protein_coding processed_transcript MGP_CBAJ_T0058813.1 MGP_CBAJ_G0026568.1 mouse_genomes_project 2 181573566 181580195 + MGP_CBAJ_P0058813 Snx21 protein_coding protein_coding MGP_CBAJ_T0058814.1 MGP_CBAJ_G0026568.1 mouse_genomes_project 2 181573734 181581518 + MGP_CBAJ_P0058814 Snx21 protein_coding protein_coding MGP_CBAJ_T0058815.1 MGP_CBAJ_G0026568.1 mouse_genomes_project 2 181573734 181580760 + MGP_CBAJ_P0058815 Snx21 protein_coding protein_coding MGP_CBAJ_T0058816.1 MGP_CBAJ_G0026568.1 mouse_genomes_project 2 181573760 181575376 + MGP_CBAJ_P0058816 Snx21 protein_coding protein_coding MGP_CBAJ_T0058817.1 MGP_CBAJ_G0026568.1 mouse_genomes_project 2 181574537 181580332 + MGP_CBAJ_P0058817 Snx21 protein_coding protein_coding MGP_CBAJ_T0058818.1 MGP_CBAJ_G0026568.1 mouse_genomes_project 2 181578118 181581524 + Snx21 protein_coding retained_intron MGP_CBAJ_T0058819.1 MGP_CBAJ_G0026568.1 mouse_genomes_project 2 181579359 181581516 + Snx21 protein_coding processed_transcript MGP_CBAJ_T0101808.1 MGP_CBAJ_G0039839.1 mouse_genomes_project 2 94902075 94902388 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013607.1 MGP_CBAJ_G0011719.1 mouse_genomes_project 2 157364242 157364392 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007308.1 MGP_CBAJ_G0005986.1 mouse_genomes_project 2 186645676 186646315 + 1700017J07Rik lincRNA lincRNA MGP_CBAJ_T0013359.1 MGP_CBAJ_G0011471.1 mouse_genomes_project 2 54739698 54740235 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057927.1 MGP_CBAJ_G0026353.1 mouse_genomes_project 2 167394620 167402509 - MGP_CBAJ_P0057927 Nrsn2 protein_coding protein_coding MGP_CBAJ_T0055518.1 MGP_CBAJ_G0025779.1 mouse_genomes_project 2 96487612 96488548 - MGP_CBAJ_P0055518 Olfr1216 protein_coding protein_coding MGP_CBAJ_T0013343.1 MGP_CBAJ_G0011455.1 mouse_genomes_project 2 50562847 50563280 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003860.1 MGP_CBAJ_G0003445.1 mouse_genomes_project 2 27069755 27074349 + AA645442 antisense antisense MGP_CBAJ_T0001055.1 MGP_CBAJ_G0000987.1 mouse_genomes_project 2 104236081 104258525 + TEC TEC MGP_CBAJ_T0007185.1 MGP_CBAJ_G0005886.1 mouse_genomes_project 2 115633758 115637911 - lincRNA lincRNA MGP_CBAJ_T0056313.1 MGP_CBAJ_G0025985.1 mouse_genomes_project 2 122745926 122750954 - MGP_CBAJ_P0056313 Emc4 protein_coding protein_coding MGP_CBAJ_T0056314.1 MGP_CBAJ_G0025985.1 mouse_genomes_project 2 122746719 122750947 - Emc4 protein_coding processed_transcript MGP_CBAJ_T0013546.1 MGP_CBAJ_G0011658.1 mouse_genomes_project 2 122776093 122776394 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0058828.1 MGP_CBAJ_G0026572.1 mouse_genomes_project 2 181624772 181626912 - Spata25 protein_coding processed_transcript MGP_CBAJ_T0058829.1 MGP_CBAJ_G0026572.1 mouse_genomes_project 2 181625765 181626921 - MGP_CBAJ_P0058829 Spata25 protein_coding protein_coding MGP_CBAJ_T0017527.1 MGP_CBAJ_G0015166.1 mouse_genomes_project 2 74640523 74641293 - Gm13625 processed_transcript processed_transcript MGP_CBAJ_T0059217.1 MGP_CBAJ_G0026658.1 mouse_genomes_project 2 192558731 192571464 + MGP_CBAJ_P0059217 Npepl1 protein_coding protein_coding MGP_CBAJ_T0059218.1 MGP_CBAJ_G0026658.1 mouse_genomes_project 2 192559536 192568774 + MGP_CBAJ_P0059218 Npepl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059219.1 MGP_CBAJ_G0026658.1 mouse_genomes_project 2 192559562 192571094 + Npepl1 protein_coding retained_intron MGP_CBAJ_T0059220.1 MGP_CBAJ_G0026658.1 mouse_genomes_project 2 192559955 192564485 + Npepl1 protein_coding retained_intron MGP_CBAJ_T0057797.1 MGP_CBAJ_G0026320.1 mouse_genomes_project 2 164052998 164056493 + MGP_CBAJ_P0057797 Cst10 protein_coding protein_coding MGP_CBAJ_T0057798.1 MGP_CBAJ_G0026320.1 mouse_genomes_project 2 164053190 164056493 + MGP_CBAJ_P0057798 Cst10 protein_coding protein_coding MGP_CBAJ_T0057799.1 MGP_CBAJ_G0026320.1 mouse_genomes_project 2 164053274 164056493 + MGP_CBAJ_P0057799 Cst10 protein_coding protein_coding MGP_CBAJ_T0053504.1 MGP_CBAJ_G0025282.1 mouse_genomes_project 2 30664761 30667439 - MGP_CBAJ_P0053504 Ier5l protein_coding protein_coding MGP_CBAJ_T0059009.1 MGP_CBAJ_G0026601.1 mouse_genomes_project 2 184251099 184275823 + MGP_CBAJ_P0059009 Ddx27 protein_coding protein_coding MGP_CBAJ_T0059010.1 MGP_CBAJ_G0026601.1 mouse_genomes_project 2 184251216 184262479 + MGP_CBAJ_P0059010 Ddx27 protein_coding protein_coding MGP_CBAJ_T0059011.1 MGP_CBAJ_G0026601.1 mouse_genomes_project 2 184251216 184261199 + MGP_CBAJ_P0059011 Ddx27 protein_coding protein_coding MGP_CBAJ_T0059012.1 MGP_CBAJ_G0026601.1 mouse_genomes_project 2 184262866 184264528 + Ddx27 protein_coding retained_intron MGP_CBAJ_T0059013.1 MGP_CBAJ_G0026601.1 mouse_genomes_project 2 184264207 184264956 + Ddx27 protein_coding retained_intron MGP_CBAJ_T0059014.1 MGP_CBAJ_G0026601.1 mouse_genomes_project 2 184274722 184275779 + Ddx27 protein_coding retained_intron MGP_CBAJ_T0010241.1 MGP_CBAJ_G0008379.1 mouse_genomes_project 2 8396217 8396290 + Mir466h miRNA miRNA MGP_CBAJ_T0013523.1 MGP_CBAJ_G0011635.1 mouse_genomes_project 2 114247587 114248772 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0059238.1 MGP_CBAJ_G0026660.1 mouse_genomes_project 2 192794946 192811330 - MGP_CBAJ_P0059238 Gm20721 protein_coding protein_coding MGP_CBAJ_T0057599.1 MGP_CBAJ_G0026267.1 mouse_genomes_project 2 153841434 153846483 + MGP_CBAJ_P0057599 Gm17374 protein_coding protein_coding MGP_CBAJ_T0010369.1 MGP_CBAJ_G0008507.1 mouse_genomes_project 2 199859132 199859200 + Mir124a-3 miRNA miRNA MGP_CBAJ_T0017491.1 MGP_CBAJ_G0015144.1 mouse_genomes_project 2 26037658 26053364 + 0610009E02Rik processed_transcript processed_transcript MGP_CBAJ_T0017492.1 MGP_CBAJ_G0015144.1 mouse_genomes_project 2 26037886 26051980 + 0610009E02Rik processed_transcript processed_transcript MGP_CBAJ_T0017493.1 MGP_CBAJ_G0015144.1 mouse_genomes_project 2 26037904 26053375 + 0610009E02Rik processed_transcript processed_transcript MGP_CBAJ_T0013606.1 MGP_CBAJ_G0011718.1 mouse_genomes_project 2 157147830 157148631 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010229.1 MGP_CBAJ_G0008367.1 mouse_genomes_project 2 8385972 8387224 + miRNA miRNA MGP_CBAJ_T0017565.1 MGP_CBAJ_G0015193.1 mouse_genomes_project 2 113952335 113961183 + Platr14 processed_transcript processed_transcript MGP_CBAJ_T0017566.1 MGP_CBAJ_G0015193.1 mouse_genomes_project 2 113952351 113961180 + Platr14 processed_transcript processed_transcript MGP_CBAJ_T0017567.1 MGP_CBAJ_G0015193.1 mouse_genomes_project 2 113952356 113964556 + Platr14 processed_transcript processed_transcript MGP_CBAJ_T0017568.1 MGP_CBAJ_G0015193.1 mouse_genomes_project 2 113952364 113961256 + Platr14 processed_transcript processed_transcript MGP_CBAJ_T0017569.1 MGP_CBAJ_G0015193.1 mouse_genomes_project 2 113952631 113961177 + Platr14 processed_transcript processed_transcript MGP_CBAJ_T0017570.1 MGP_CBAJ_G0015193.1 mouse_genomes_project 2 113960323 113961959 + Platr14 processed_transcript processed_transcript MGP_CBAJ_T0053408.1 MGP_CBAJ_G0025270.1 mouse_genomes_project 2 30337038 30361928 - MGP_CBAJ_P0053408 Kyat1 protein_coding protein_coding MGP_CBAJ_T0053409.1 MGP_CBAJ_G0025270.1 mouse_genomes_project 2 30337040 30361897 - Kyat1 protein_coding processed_transcript MGP_CBAJ_T0053410.1 MGP_CBAJ_G0025270.1 mouse_genomes_project 2 30337040 30361856 - MGP_CBAJ_P0053410 Kyat1 protein_coding protein_coding MGP_CBAJ_T0053411.1 MGP_CBAJ_G0025270.1 mouse_genomes_project 2 30337045 30354660 - MGP_CBAJ_P0053411 Kyat1 protein_coding protein_coding MGP_CBAJ_T0053412.1 MGP_CBAJ_G0025270.1 mouse_genomes_project 2 30337045 30361882 - MGP_CBAJ_P0053412 Kyat1 protein_coding protein_coding MGP_CBAJ_T0053413.1 MGP_CBAJ_G0025270.1 mouse_genomes_project 2 30337182 30346027 - MGP_CBAJ_P0053413 Kyat1 protein_coding protein_coding MGP_CBAJ_T0053414.1 MGP_CBAJ_G0025270.1 mouse_genomes_project 2 30337182 30346027 - MGP_CBAJ_P0053414 Kyat1 protein_coding protein_coding MGP_CBAJ_T0053415.1 MGP_CBAJ_G0025270.1 mouse_genomes_project 2 30343036 30361870 - Kyat1 protein_coding processed_transcript MGP_CBAJ_T0010245.1 MGP_CBAJ_G0008383.1 mouse_genomes_project 2 8398609 8398699 + Gm24806 miRNA miRNA MGP_CBAJ_T0013480.1 MGP_CBAJ_G0011592.1 mouse_genomes_project 2 96707013 96707820 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007313.1 MGP_CBAJ_G0005990.1 mouse_genomes_project 2 186971178 186973931 + 9430093N23Rik lincRNA lincRNA MGP_CBAJ_T0099100.1 MGP_CBAJ_G0037355.1 mouse_genomes_project 2 38398505 38398612 + Gm22306 snRNA snRNA MGP_CBAJ_T0053301.1 MGP_CBAJ_G0025256.1 mouse_genomes_project 2 29878588 29896680 + MGP_CBAJ_P0053301 Slc27a4 protein_coding protein_coding MGP_CBAJ_T0053302.1 MGP_CBAJ_G0025256.1 mouse_genomes_project 2 29882952 29890061 + Slc27a4 protein_coding processed_transcript MGP_CBAJ_T0013357.1 MGP_CBAJ_G0011469.1 mouse_genomes_project 2 54355829 54356064 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011393.1 MGP_CBAJ_G0009531.1 mouse_genomes_project 2 174475064 174475150 + Gm24379 misc_RNA misc_RNA MGP_CBAJ_T0099113.1 MGP_CBAJ_G0037368.1 mouse_genomes_project 2 86563560 86563663 + Gm24461 snRNA snRNA MGP_CBAJ_T0058432.1 MGP_CBAJ_G0026465.1 mouse_genomes_project 2 172600742 172621824 - MGP_CBAJ_P0058432 Sla2 protein_coding protein_coding MGP_CBAJ_T0058434.1 MGP_CBAJ_G0026465.1 mouse_genomes_project 2 172601207 172621938 - MGP_CBAJ_P0058434 Sla2 protein_coding protein_coding MGP_CBAJ_T0058095.1 MGP_CBAJ_G0026409.1 mouse_genomes_project 2 169703459 169751096 - MGP_CBAJ_P0058095 Snta1 protein_coding protein_coding MGP_CBAJ_T0058096.1 MGP_CBAJ_G0026409.1 mouse_genomes_project 2 169703459 169751078 - MGP_CBAJ_P0058096 Snta1 protein_coding protein_coding MGP_CBAJ_T0058097.1 MGP_CBAJ_G0026409.1 mouse_genomes_project 2 169742321 169750977 - Snta1 protein_coding processed_transcript MGP_CBAJ_T0013688.1 MGP_CBAJ_G0011800.1 mouse_genomes_project 2 185933631 185934476 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055421.1 MGP_CBAJ_G0025696.1 mouse_genomes_project 2 93889891 93890857 - MGP_CBAJ_P0055421 Olfr1100 protein_coding protein_coding MGP_CBAJ_T0057453.1 MGP_CBAJ_G0026235.1 mouse_genomes_project 2 144866229 144871498 + MGP_CBAJ_P0057453 Prnd protein_coding protein_coding MGP_CBAJ_T0057454.1 MGP_CBAJ_G0026235.1 mouse_genomes_project 2 144866230 144871498 + MGP_CBAJ_P0057454 Prnd protein_coding protein_coding MGP_CBAJ_T0057455.1 MGP_CBAJ_G0026235.1 mouse_genomes_project 2 144866230 144871498 + MGP_CBAJ_P0057455 Prnd protein_coding protein_coding MGP_CBAJ_T0057456.1 MGP_CBAJ_G0026235.1 mouse_genomes_project 2 144866405 144871498 + MGP_CBAJ_P0057456 Prnd protein_coding protein_coding MGP_CBAJ_T0013435.1 MGP_CBAJ_G0011547.1 mouse_genomes_project 2 83699281 83700075 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001034.1 MGP_CBAJ_G0000966.1 mouse_genomes_project 2 37312827 37314855 - TEC TEC MGP_CBAJ_T0003970.1 MGP_CBAJ_G0003524.1 mouse_genomes_project 2 114548392 114561699 - Wt1os antisense antisense MGP_CBAJ_T0003971.1 MGP_CBAJ_G0003524.1 mouse_genomes_project 2 114548715 114604911 - Wt1os antisense antisense MGP_CBAJ_T0003972.1 MGP_CBAJ_G0003524.1 mouse_genomes_project 2 114549765 114549966 - Wt1os antisense antisense MGP_CBAJ_T0003973.1 MGP_CBAJ_G0003524.1 mouse_genomes_project 2 114567427 114604804 - Wt1os antisense antisense MGP_CBAJ_T0057457.1 MGP_CBAJ_G0026236.1 mouse_genomes_project 2 144915294 144958073 - MGP_CBAJ_P0057457 Rassf2 protein_coding protein_coding MGP_CBAJ_T0057458.1 MGP_CBAJ_G0026236.1 mouse_genomes_project 2 144918672 144958273 - MGP_CBAJ_P0057458 Rassf2 protein_coding protein_coding MGP_CBAJ_T0057459.1 MGP_CBAJ_G0026236.1 mouse_genomes_project 2 144929043 144949245 - Rassf2 protein_coding retained_intron MGP_CBAJ_T0057460.1 MGP_CBAJ_G0026236.1 mouse_genomes_project 2 144931026 144958329 - MGP_CBAJ_P0057460 Rassf2 protein_coding protein_coding MGP_CBAJ_T0057461.1 MGP_CBAJ_G0026236.1 mouse_genomes_project 2 144937829 144957238 - MGP_CBAJ_P0057461 Rassf2 protein_coding protein_coding MGP_CBAJ_T0051985.1 MGP_CBAJ_G0025025.1 mouse_genomes_project 2 1082373 1249899 + protein_coding processed_transcript MGP_CBAJ_T0051986.1 MGP_CBAJ_G0025025.1 mouse_genomes_project 2 1082390 1086561 + protein_coding retained_intron MGP_CBAJ_T0051987.1 MGP_CBAJ_G0025025.1 mouse_genomes_project 2 1082400 1754328 + MGP_CBAJ_P0051987 protein_coding protein_coding MGP_CBAJ_T0051988.1 MGP_CBAJ_G0025025.1 mouse_genomes_project 2 1235893 1254318 + protein_coding processed_transcript MGP_CBAJ_T0051989.1 MGP_CBAJ_G0025025.1 mouse_genomes_project 2 1235902 1754229 + MGP_CBAJ_P0051989 protein_coding protein_coding MGP_CBAJ_T0051990.1 MGP_CBAJ_G0025025.1 mouse_genomes_project 2 1392719 1706615 + MGP_CBAJ_P0051990 protein_coding protein_coding MGP_CBAJ_T0051991.1 MGP_CBAJ_G0025025.1 mouse_genomes_project 2 1393086 1673088 + protein_coding retained_intron MGP_CBAJ_T0051992.1 MGP_CBAJ_G0025025.1 mouse_genomes_project 2 1393204 1694434 + MGP_CBAJ_P0051992 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051993.1 MGP_CBAJ_G0025025.1 mouse_genomes_project 2 1428673 1728817 + MGP_CBAJ_P0051993 protein_coding protein_coding MGP_CBAJ_T0051994.1 MGP_CBAJ_G0025025.1 mouse_genomes_project 2 1504844 1663989 + MGP_CBAJ_P0051994 protein_coding protein_coding MGP_CBAJ_T0051995.1 MGP_CBAJ_G0025025.1 mouse_genomes_project 2 1504846 1552101 + protein_coding retained_intron MGP_CBAJ_T0051996.1 MGP_CBAJ_G0025025.1 mouse_genomes_project 2 1519149 1549953 + protein_coding retained_intron MGP_CBAJ_T0051997.1 MGP_CBAJ_G0025025.1 mouse_genomes_project 2 1519183 1671926 + protein_coding retained_intron MGP_CBAJ_T0051998.1 MGP_CBAJ_G0025025.1 mouse_genomes_project 2 1543943 1754332 + MGP_CBAJ_P0051998 protein_coding protein_coding MGP_CBAJ_T0051999.1 MGP_CBAJ_G0025025.1 mouse_genomes_project 2 1599271 1626794 + protein_coding retained_intron MGP_CBAJ_T0052000.1 MGP_CBAJ_G0025025.1 mouse_genomes_project 2 1693927 1735322 + protein_coding retained_intron MGP_CBAJ_T0052001.1 MGP_CBAJ_G0025025.1 mouse_genomes_project 2 1693929 1752871 + MGP_CBAJ_P0052001 protein_coding protein_coding MGP_CBAJ_T0052002.1 MGP_CBAJ_G0025025.1 mouse_genomes_project 2 1693948 1722360 + protein_coding retained_intron MGP_CBAJ_T0052003.1 MGP_CBAJ_G0025025.1 mouse_genomes_project 2 1700359 1728853 + MGP_CBAJ_P0052003 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057905.1 MGP_CBAJ_G0026348.1 mouse_genomes_project 2 167147343 167152880 + MGP_CBAJ_P0057905 Tcf15 protein_coding protein_coding MGP_CBAJ_T0013483.1 MGP_CBAJ_G0011595.1 mouse_genomes_project 2 99423885 99424190 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010316.1 MGP_CBAJ_G0008454.1 mouse_genomes_project 2 113099412 113099508 + Gm22757 miRNA miRNA MGP_CBAJ_T0013448.1 MGP_CBAJ_G0011560.1 mouse_genomes_project 2 86941686 86948573 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101832.1 MGP_CBAJ_G0039863.1 mouse_genomes_project 2 168399244 168399912 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0052396.1 MGP_CBAJ_G0025088.1 mouse_genomes_project 2 17563962 17575426 + Bmi1 protein_coding processed_transcript MGP_CBAJ_T0052397.1 MGP_CBAJ_G0025088.1 mouse_genomes_project 2 17567433 17576737 + MGP_CBAJ_P0052397 Bmi1 protein_coding protein_coding MGP_CBAJ_T0052398.1 MGP_CBAJ_G0025088.1 mouse_genomes_project 2 17569996 17577074 + MGP_CBAJ_P0052398 Bmi1 protein_coding protein_coding MGP_CBAJ_T0052399.1 MGP_CBAJ_G0025088.1 mouse_genomes_project 2 17570616 17576091 + MGP_CBAJ_P0052399 Bmi1 protein_coding protein_coding MGP_CBAJ_T0052400.1 MGP_CBAJ_G0025088.1 mouse_genomes_project 2 17570729 17575917 + MGP_CBAJ_P0052400 Bmi1 protein_coding protein_coding MGP_CBAJ_T0001005.1 MGP_CBAJ_G0000937.1 mouse_genomes_project 2 11255166 11259119 + TEC TEC MGP_CBAJ_T0054850.1 MGP_CBAJ_G0025527.1 mouse_genomes_project 2 75545310 75596106 + MGP_CBAJ_P0054850 Gorasp2 protein_coding protein_coding MGP_CBAJ_T0054851.1 MGP_CBAJ_G0025527.1 mouse_genomes_project 2 75545310 75575422 + MGP_CBAJ_P0054851 Gorasp2 protein_coding protein_coding MGP_CBAJ_T0054852.1 MGP_CBAJ_G0025527.1 mouse_genomes_project 2 75545310 75575404 + MGP_CBAJ_P0054852 Gorasp2 protein_coding protein_coding MGP_CBAJ_T0054853.1 MGP_CBAJ_G0025527.1 mouse_genomes_project 2 75545324 75573039 + MGP_CBAJ_P0054853 Gorasp2 protein_coding protein_coding MGP_CBAJ_T0054854.1 MGP_CBAJ_G0025527.1 mouse_genomes_project 2 75545934 75561629 + Gorasp2 protein_coding processed_transcript MGP_CBAJ_T0054855.1 MGP_CBAJ_G0025527.1 mouse_genomes_project 2 75571491 75575400 + Gorasp2 protein_coding processed_transcript MGP_CBAJ_T0101829.1 MGP_CBAJ_G0039860.1 mouse_genomes_project 2 152417286 152417871 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0052384.1 MGP_CBAJ_G0025087.1 mouse_genomes_project 2 17558264 17562073 + MGP_CBAJ_P0052384 Commd3 protein_coding protein_coding MGP_CBAJ_T0052385.1 MGP_CBAJ_G0025087.1 mouse_genomes_project 2 17558303 17562074 + MGP_CBAJ_P0052385 Commd3 protein_coding protein_coding MGP_CBAJ_T0052386.1 MGP_CBAJ_G0025087.1 mouse_genomes_project 2 17558313 17560535 + Commd3 protein_coding processed_transcript MGP_CBAJ_T0052387.1 MGP_CBAJ_G0025087.1 mouse_genomes_project 2 17558315 17560478 + Commd3 protein_coding processed_transcript MGP_CBAJ_T0052388.1 MGP_CBAJ_G0025087.1 mouse_genomes_project 2 17558316 17560355 + Commd3 protein_coding processed_transcript MGP_CBAJ_T0052389.1 MGP_CBAJ_G0025087.1 mouse_genomes_project 2 17558403 17560243 + Commd3 protein_coding processed_transcript MGP_CBAJ_T0052390.1 MGP_CBAJ_G0025087.1 mouse_genomes_project 2 17559500 17560240 + Commd3 protein_coding processed_transcript MGP_CBAJ_T0052391.1 MGP_CBAJ_G0025087.1 mouse_genomes_project 2 17559803 17561771 + Commd3 protein_coding processed_transcript MGP_CBAJ_T0052392.1 MGP_CBAJ_G0025087.1 mouse_genomes_project 2 17559927 17561824 + Commd3 protein_coding processed_transcript MGP_CBAJ_T0052393.1 MGP_CBAJ_G0025087.1 mouse_genomes_project 2 17560189 17561766 + Commd3 protein_coding processed_transcript MGP_CBAJ_T0052394.1 MGP_CBAJ_G0025087.1 mouse_genomes_project 2 17560266 17560849 + Commd3 protein_coding processed_transcript MGP_CBAJ_T0052395.1 MGP_CBAJ_G0025087.1 mouse_genomes_project 2 17560491 17561344 + Commd3 protein_coding processed_transcript MGP_CBAJ_T0013586.1 MGP_CBAJ_G0011698.1 mouse_genomes_project 2 145692779 145693234 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0059295.1 MGP_CBAJ_G0026677.1 mouse_genomes_project 2 198893833 198918942 + MGP_CBAJ_P0059295 Ss18l1 protein_coding protein_coding MGP_CBAJ_T0010331.1 MGP_CBAJ_G0008469.1 mouse_genomes_project 2 140319069 140319195 + Gm22411 miRNA miRNA MGP_CBAJ_T0007169.1 MGP_CBAJ_G0005873.1 mouse_genomes_project 2 103041869 103043595 - Gm13793 lincRNA lincRNA MGP_CBAJ_T0053164.1 MGP_CBAJ_G0025230.1 mouse_genomes_project 2 27911403 27919911 - MGP_CBAJ_P0053164 Fcnb protein_coding protein_coding MGP_CBAJ_T0053165.1 MGP_CBAJ_G0025230.1 mouse_genomes_project 2 27913124 27919911 - MGP_CBAJ_P0053165 Fcnb protein_coding protein_coding MGP_CBAJ_T0053166.1 MGP_CBAJ_G0025230.1 mouse_genomes_project 2 27914764 27919911 - MGP_CBAJ_P0053166 Fcnb protein_coding protein_coding MGP_CBAJ_T0056209.1 MGP_CBAJ_G0025933.1 mouse_genomes_project 2 116676119 116690467 - MGP_CBAJ_P0056209 Arl14ep protein_coding protein_coding MGP_CBAJ_T0056210.1 MGP_CBAJ_G0025933.1 mouse_genomes_project 2 116678020 116683983 - MGP_CBAJ_P0056210 Arl14ep protein_coding protein_coding MGP_CBAJ_T0056211.1 MGP_CBAJ_G0025933.1 mouse_genomes_project 2 116678782 116682869 - Arl14ep protein_coding retained_intron MGP_CBAJ_T0056212.1 MGP_CBAJ_G0025933.1 mouse_genomes_project 2 116680999 116690440 - Arl14ep protein_coding retained_intron MGP_CBAJ_T0010354.1 MGP_CBAJ_G0008492.1 mouse_genomes_project 2 181038725 181038796 - Mir7678 miRNA miRNA MGP_CBAJ_T0055408.1 MGP_CBAJ_G0025684.1 mouse_genomes_project 2 93319523 93320471 - MGP_CBAJ_P0055408 Olfr1079 protein_coding protein_coding MGP_CBAJ_T0055409.1 MGP_CBAJ_G0025684.1 mouse_genomes_project 2 93319523 93325878 - MGP_CBAJ_P0055409 Olfr1079 protein_coding protein_coding MGP_CBAJ_T0003857.1 MGP_CBAJ_G0003442.1 mouse_genomes_project 2 26755262 26758831 + Gm13398 antisense antisense MGP_CBAJ_T0017505.1 MGP_CBAJ_G0015153.1 mouse_genomes_project 2 31497392 31503138 - D330023K18Rik processed_transcript processed_transcript MGP_CBAJ_T0017506.1 MGP_CBAJ_G0015153.1 mouse_genomes_project 2 31501487 31503138 - D330023K18Rik processed_transcript processed_transcript MGP_CBAJ_T0001016.1 MGP_CBAJ_G0000948.1 mouse_genomes_project 2 13168627 13171005 - TEC TEC MGP_CBAJ_T0010219.1 MGP_CBAJ_G0008357.1 mouse_genomes_project 2 8372041 8372135 + Mir466f-2 miRNA miRNA MGP_CBAJ_T0052519.1 MGP_CBAJ_G0025111.1 mouse_genomes_project 2 22544786 22638550 + MGP_CBAJ_P0052519 Nxph2 protein_coding protein_coding MGP_CBAJ_T0013411.1 MGP_CBAJ_G0011523.1 mouse_genomes_project 2 74556315 74556960 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0059077.1 MGP_CBAJ_G0026617.1 mouse_genomes_project 2 185671791 185697696 - MGP_CBAJ_P0059077 Adnp protein_coding protein_coding MGP_CBAJ_T0059078.1 MGP_CBAJ_G0026617.1 mouse_genomes_project 2 185671791 185697886 - MGP_CBAJ_P0059078 Adnp protein_coding protein_coding MGP_CBAJ_T0059080.1 MGP_CBAJ_G0026617.1 mouse_genomes_project 2 185675773 185697483 - Adnp protein_coding processed_transcript MGP_CBAJ_T0059081.1 MGP_CBAJ_G0026617.1 mouse_genomes_project 2 185695130 185697483 - Adnp protein_coding retained_intron MGP_CBAJ_T0007024.1 MGP_CBAJ_G0005759.1 mouse_genomes_project 2 3534320 3541759 + Gm10857 lincRNA lincRNA MGP_CBAJ_T0007025.1 MGP_CBAJ_G0005759.1 mouse_genomes_project 2 3534334 3541704 + Gm10857 lincRNA lincRNA MGP_CBAJ_T0054129.1 MGP_CBAJ_G0025385.1 mouse_genomes_project 2 37847384 37850568 + MGP_CBAJ_P0054129 Olfr348 protein_coding protein_coding MGP_CBAJ_T0054130.1 MGP_CBAJ_G0025385.1 mouse_genomes_project 2 37849626 37850568 + MGP_CBAJ_P0054130 Olfr348 protein_coding protein_coding MGP_CBAJ_T0059205.1 MGP_CBAJ_G0026654.1 mouse_genomes_project 2 192054100 192106152 + MGP_CBAJ_P0059205 Rab22a protein_coding protein_coding MGP_CBAJ_T0059206.1 MGP_CBAJ_G0026654.1 mouse_genomes_project 2 192054100 192106124 + MGP_CBAJ_P0059206 Rab22a protein_coding nonsense_mediated_decay MGP_CBAJ_T0059207.1 MGP_CBAJ_G0026654.1 mouse_genomes_project 2 192054196 192099963 + MGP_CBAJ_P0059207 Rab22a protein_coding protein_coding MGP_CBAJ_T0055506.1 MGP_CBAJ_G0025769.1 mouse_genomes_project 2 96205883 96208181 + MGP_CBAJ_P0055506 Olfr1201 protein_coding protein_coding MGP_CBAJ_T0017587.1 MGP_CBAJ_G0015201.1 mouse_genomes_project 2 128891448 129172843 - Gm13986 processed_transcript processed_transcript MGP_CBAJ_T0017588.1 MGP_CBAJ_G0015201.1 mouse_genomes_project 2 129131630 129172732 - Gm13986 processed_transcript processed_transcript MGP_CBAJ_T0011396.1 MGP_CBAJ_G0009534.1 mouse_genomes_project 2 184303280 184303469 + Gm27494 misc_RNA misc_RNA MGP_CBAJ_T0057449.1 MGP_CBAJ_G0026233.1 mouse_genomes_project 2 144835555 144853798 + MGP_CBAJ_P0057449 Prnp protein_coding protein_coding MGP_CBAJ_T0057450.1 MGP_CBAJ_G0026233.1 mouse_genomes_project 2 144835569 144843787 + Prnp protein_coding processed_transcript MGP_CBAJ_T0013500.1 MGP_CBAJ_G0011612.1 mouse_genomes_project 2 106538363 106538852 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0053840.1 MGP_CBAJ_G0025332.1 mouse_genomes_project 2 33391023 33393270 - 6330409D20Rik protein_coding processed_transcript MGP_CBAJ_T0053841.1 MGP_CBAJ_G0025332.1 mouse_genomes_project 2 33391023 33399410 - MGP_CBAJ_P0053841 6330409D20Rik protein_coding protein_coding MGP_CBAJ_T0054571.1 MGP_CBAJ_G0025475.1 mouse_genomes_project 2 64323135 64400133 - MGP_CBAJ_P0054571 Itgb6 protein_coding protein_coding MGP_CBAJ_T0054572.1 MGP_CBAJ_G0025475.1 mouse_genomes_project 2 64325074 64453002 - MGP_CBAJ_P0054572 Itgb6 protein_coding protein_coding MGP_CBAJ_T0054573.1 MGP_CBAJ_G0025475.1 mouse_genomes_project 2 64329088 64453002 - MGP_CBAJ_P0054573 Itgb6 protein_coding protein_coding MGP_CBAJ_T0054574.1 MGP_CBAJ_G0025475.1 mouse_genomes_project 2 64329982 64400148 - MGP_CBAJ_P0054574 Itgb6 protein_coding protein_coding MGP_CBAJ_T0054575.1 MGP_CBAJ_G0025475.1 mouse_genomes_project 2 64360376 64400115 - Itgb6 protein_coding processed_transcript MGP_CBAJ_T0054576.1 MGP_CBAJ_G0025475.1 mouse_genomes_project 2 64378993 64400176 - Itgb6 protein_coding processed_transcript MGP_CBAJ_T0054577.1 MGP_CBAJ_G0025475.1 mouse_genomes_project 2 64395667 64400125 - Itgb6 protein_coding processed_transcript MGP_CBAJ_T0054578.1 MGP_CBAJ_G0025475.1 mouse_genomes_project 2 64401065 64431997 - Itgb6 protein_coding processed_transcript MGP_CBAJ_T0054579.1 MGP_CBAJ_G0025475.1 mouse_genomes_project 2 64419828 64431974 - Itgb6 protein_coding processed_transcript MGP_CBAJ_T0055558.1 MGP_CBAJ_G0025809.1 mouse_genomes_project 2 97417189 97420967 + MGP_CBAJ_P0055558 Olfr1255 protein_coding protein_coding MGP_CBAJ_T0013680.1 MGP_CBAJ_G0011792.1 mouse_genomes_project 2 183640629 183641125 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0057609.1 MGP_CBAJ_G0026270.1 mouse_genomes_project 2 154104490 156302829 + MGP_CBAJ_P0057609 Macrod2 protein_coding protein_coding MGP_CBAJ_T0057610.1 MGP_CBAJ_G0026270.1 mouse_genomes_project 2 154104537 154439333 + MGP_CBAJ_P0057610 Macrod2 protein_coding protein_coding MGP_CBAJ_T0057611.1 MGP_CBAJ_G0026270.1 mouse_genomes_project 2 154104537 156302829 + MGP_CBAJ_P0057611 Macrod2 protein_coding protein_coding MGP_CBAJ_T0057612.1 MGP_CBAJ_G0026270.1 mouse_genomes_project 2 154104611 154135260 + MGP_CBAJ_P0057612 Macrod2 protein_coding protein_coding MGP_CBAJ_T0057613.1 MGP_CBAJ_G0026270.1 mouse_genomes_project 2 154104614 154571646 + Macrod2 protein_coding retained_intron MGP_CBAJ_T0057614.1 MGP_CBAJ_G0026270.1 mouse_genomes_project 2 154104616 154135263 + MGP_CBAJ_P0057614 Macrod2 protein_coding protein_coding MGP_CBAJ_T0057615.1 MGP_CBAJ_G0026270.1 mouse_genomes_project 2 154104616 156291730 + MGP_CBAJ_P0057615 Macrod2 protein_coding protein_coding MGP_CBAJ_T0057616.1 MGP_CBAJ_G0026270.1 mouse_genomes_project 2 154104623 154225577 + Macrod2 protein_coding processed_transcript MGP_CBAJ_T0057617.1 MGP_CBAJ_G0026270.1 mouse_genomes_project 2 154104637 154378052 + Macrod2 protein_coding processed_transcript MGP_CBAJ_T0057618.1 MGP_CBAJ_G0026270.1 mouse_genomes_project 2 154104641 154132804 + Macrod2 protein_coding processed_transcript MGP_CBAJ_T0057619.1 MGP_CBAJ_G0026270.1 mouse_genomes_project 2 154104776 154132804 + MGP_CBAJ_P0057619 Macrod2 protein_coding protein_coding MGP_CBAJ_T0057623.1 MGP_CBAJ_G0026270.1 mouse_genomes_project 2 154792531 154928809 + Macrod2 protein_coding processed_transcript MGP_CBAJ_T0057624.1 MGP_CBAJ_G0026270.1 mouse_genomes_project 2 155376919 156302829 + Macrod2 protein_coding processed_transcript MGP_CBAJ_T0057625.1 MGP_CBAJ_G0026270.1 mouse_genomes_project 2 156079884 156133169 + MGP_CBAJ_P0057625 Macrod2 protein_coding protein_coding MGP_CBAJ_T0055965.1 MGP_CBAJ_G0025884.1 mouse_genomes_project 2 102562874 102686252 - MGP_CBAJ_P0055965 Ttc17 protein_coding protein_coding MGP_CBAJ_T0055966.1 MGP_CBAJ_G0025884.1 mouse_genomes_project 2 102562876 102686266 - MGP_CBAJ_P0055966 Ttc17 protein_coding protein_coding MGP_CBAJ_T0055967.1 MGP_CBAJ_G0025884.1 mouse_genomes_project 2 102592098 102686275 - MGP_CBAJ_P0055967 Ttc17 protein_coding protein_coding MGP_CBAJ_T0055968.1 MGP_CBAJ_G0025884.1 mouse_genomes_project 2 102621381 102629166 - Ttc17 protein_coding processed_transcript MGP_CBAJ_T0055969.1 MGP_CBAJ_G0025884.1 mouse_genomes_project 2 102646000 102684588 - Ttc17 protein_coding processed_transcript MGP_CBAJ_T0056491.1 MGP_CBAJ_G0026028.1 mouse_genomes_project 2 130303853 130327801 - MGP_CBAJ_P0056491 Rmdn3 protein_coding protein_coding MGP_CBAJ_T0056492.1 MGP_CBAJ_G0026028.1 mouse_genomes_project 2 130305907 130307728 - Rmdn3 protein_coding retained_intron MGP_CBAJ_T0056493.1 MGP_CBAJ_G0026028.1 mouse_genomes_project 2 130309270 130318216 - Rmdn3 protein_coding retained_intron MGP_CBAJ_T0056494.1 MGP_CBAJ_G0026028.1 mouse_genomes_project 2 130316884 130318225 - Rmdn3 protein_coding retained_intron MGP_CBAJ_T0056495.1 MGP_CBAJ_G0026028.1 mouse_genomes_project 2 130324804 130327591 - MGP_CBAJ_P0056495 Rmdn3 protein_coding protein_coding MGP_CBAJ_T0056496.1 MGP_CBAJ_G0026028.1 mouse_genomes_project 2 130324834 130327715 - MGP_CBAJ_P0056496 Rmdn3 protein_coding protein_coding MGP_CBAJ_T0056497.1 MGP_CBAJ_G0026028.1 mouse_genomes_project 2 130324844 130327731 - MGP_CBAJ_P0056497 Rmdn3 protein_coding protein_coding MGP_CBAJ_T0017590.1 MGP_CBAJ_G0015203.1 mouse_genomes_project 2 130516930 130521861 - Gm14207 processed_transcript processed_transcript MGP_CBAJ_T0017591.1 MGP_CBAJ_G0015203.1 mouse_genomes_project 2 130516930 130521210 - Gm14207 processed_transcript processed_transcript MGP_CBAJ_T0017592.1 MGP_CBAJ_G0015203.1 mouse_genomes_project 2 130517085 130521231 - Gm14207 processed_transcript processed_transcript MGP_CBAJ_T0013494.1 MGP_CBAJ_G0011606.1 mouse_genomes_project 2 104037368 104037507 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013551.1 MGP_CBAJ_G0011663.1 mouse_genomes_project 2 128179595 128180154 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0057791.1 MGP_CBAJ_G0026317.1 mouse_genomes_project 2 163427578 163431537 + MGP_CBAJ_P0057791 Cst9 protein_coding protein_coding MGP_CBAJ_T0054011.1 MGP_CBAJ_G0025358.1 mouse_genomes_project 2 35861208 35879049 - MGP_CBAJ_P0054011 Traf1 protein_coding protein_coding MGP_CBAJ_T0054012.1 MGP_CBAJ_G0025358.1 mouse_genomes_project 2 35862714 35882468 - MGP_CBAJ_P0054012 Traf1 protein_coding protein_coding MGP_CBAJ_T0054013.1 MGP_CBAJ_G0025358.1 mouse_genomes_project 2 35862716 35882655 - MGP_CBAJ_P0054013 Traf1 protein_coding protein_coding MGP_CBAJ_T0054014.1 MGP_CBAJ_G0025358.1 mouse_genomes_project 2 35868006 35882465 - Traf1 protein_coding processed_transcript MGP_CBAJ_T0054015.1 MGP_CBAJ_G0025358.1 mouse_genomes_project 2 35876958 35879022 - MGP_CBAJ_P0054015 Traf1 protein_coding protein_coding MGP_CBAJ_T0054016.1 MGP_CBAJ_G0025358.1 mouse_genomes_project 2 35877067 35879047 - Traf1 protein_coding retained_intron MGP_CBAJ_T0054017.1 MGP_CBAJ_G0025358.1 mouse_genomes_project 2 35877079 35879791 - Traf1 protein_coding processed_transcript MGP_CBAJ_T0054018.1 MGP_CBAJ_G0025358.1 mouse_genomes_project 2 35878432 35882480 - Traf1 protein_coding retained_intron MGP_CBAJ_T0054019.1 MGP_CBAJ_G0025358.1 mouse_genomes_project 2 35879037 35882445 - Traf1 protein_coding processed_transcript MGP_CBAJ_T0054096.1 MGP_CBAJ_G0025370.1 mouse_genomes_project 2 37085353 37098434 - MGP_CBAJ_P0054096 Ndufa8 protein_coding protein_coding MGP_CBAJ_T0055202.1 MGP_CBAJ_G0025597.1 mouse_genomes_project 2 86384128 86429023 - MGP_CBAJ_P0055202 Frzb protein_coding protein_coding MGP_CBAJ_T0055203.1 MGP_CBAJ_G0025597.1 mouse_genomes_project 2 86385271 86418363 - Frzb protein_coding processed_transcript MGP_CBAJ_T0054134.1 MGP_CBAJ_G0025389.1 mouse_genomes_project 2 37931435 37932368 - MGP_CBAJ_P0054134 Olfr351 protein_coding protein_coding MGP_CBAJ_T0007023.1 MGP_CBAJ_G0005758.1 mouse_genomes_project 2 2368448 2479070 - Gm26776 lincRNA lincRNA MGP_CBAJ_T0003865.1 MGP_CBAJ_G0003449.1 mouse_genomes_project 2 30392971 30394401 - 1700084E18Rik antisense antisense MGP_CBAJ_T0003866.1 MGP_CBAJ_G0003449.1 mouse_genomes_project 2 30393669 30394401 - 1700084E18Rik antisense pseudogene MGP_CBAJ_T0017614.1 MGP_CBAJ_G0015211.1 mouse_genomes_project 2 141622486 141627226 - Gm14022 processed_transcript processed_transcript MGP_CBAJ_T0055135.1 MGP_CBAJ_G0025586.1 mouse_genomes_project 2 83092184 83436288 - MGP_CBAJ_P0055135 Zfp385b protein_coding protein_coding MGP_CBAJ_T0055136.1 MGP_CBAJ_G0025586.1 mouse_genomes_project 2 83092184 83207146 - MGP_CBAJ_P0055136 Zfp385b protein_coding protein_coding MGP_CBAJ_T0055137.1 MGP_CBAJ_G0025586.1 mouse_genomes_project 2 83092184 83419231 - MGP_CBAJ_P0055137 Zfp385b protein_coding protein_coding MGP_CBAJ_T0055138.1 MGP_CBAJ_G0025586.1 mouse_genomes_project 2 83092650 83544917 - MGP_CBAJ_P0055138 Zfp385b protein_coding protein_coding MGP_CBAJ_T0055139.1 MGP_CBAJ_G0025586.1 mouse_genomes_project 2 83097464 83207142 - Zfp385b protein_coding processed_transcript MGP_CBAJ_T0055140.1 MGP_CBAJ_G0025586.1 mouse_genomes_project 2 83131811 83419231 - Zfp385b protein_coding processed_transcript MGP_CBAJ_T0055141.1 MGP_CBAJ_G0025586.1 mouse_genomes_project 2 83156318 83207063 - Zfp385b protein_coding processed_transcript MGP_CBAJ_T0055142.1 MGP_CBAJ_G0025586.1 mouse_genomes_project 2 83186297 83419338 - Zfp385b protein_coding processed_transcript MGP_CBAJ_T0055143.1 MGP_CBAJ_G0025586.1 mouse_genomes_project 2 83216232 83545360 - MGP_CBAJ_P0055143 Zfp385b protein_coding protein_coding MGP_CBAJ_T0055144.1 MGP_CBAJ_G0025586.1 mouse_genomes_project 2 83216983 83252385 - Zfp385b protein_coding processed_transcript MGP_CBAJ_T0055145.1 MGP_CBAJ_G0025586.1 mouse_genomes_project 2 83545337 83547734 - Zfp385b protein_coding processed_transcript MGP_CBAJ_T0053534.1 MGP_CBAJ_G0025287.1 mouse_genomes_project 2 31119486 31167847 + MGP_CBAJ_P0053534 Prrx2 protein_coding protein_coding MGP_CBAJ_T0053535.1 MGP_CBAJ_G0025287.1 mouse_genomes_project 2 31129570 31167876 + MGP_CBAJ_P0053535 Prrx2 protein_coding protein_coding MGP_CBAJ_T0053536.1 MGP_CBAJ_G0025287.1 mouse_genomes_project 2 31129955 31165278 + Prrx2 protein_coding retained_intron MGP_CBAJ_T0053537.1 MGP_CBAJ_G0025287.1 mouse_genomes_project 2 31165939 31167745 + Prrx2 protein_coding retained_intron MGP_CBAJ_T0004099.1 MGP_CBAJ_G0003619.1 mouse_genomes_project 2 188419258 188433766 - Gm16796 antisense antisense MGP_CBAJ_T0010251.1 MGP_CBAJ_G0008389.1 mouse_genomes_project 2 16842992 16843050 + Mir7655 miRNA miRNA MGP_CBAJ_T0099117.1 MGP_CBAJ_G0037372.1 mouse_genomes_project 2 99022584 99022690 + Gm23390 snRNA snRNA MGP_CBAJ_T0007170.1 MGP_CBAJ_G0005874.1 mouse_genomes_project 2 103727636 103732484 + Gm13794 lincRNA lincRNA MGP_CBAJ_T0007137.1 MGP_CBAJ_G0005847.1 mouse_genomes_project 2 80132891 80133952 + Gm14424 lincRNA lincRNA MGP_CBAJ_T0010363.1 MGP_CBAJ_G0008501.1 mouse_genomes_project 2 192729455 192729534 - Mir296 miRNA miRNA MGP_CBAJ_T0010330.1 MGP_CBAJ_G0008468.1 mouse_genomes_project 2 139205923 139206059 - Mir3473g miRNA miRNA MGP_CBAJ_T0058123.1 MGP_CBAJ_G0026417.1 mouse_genomes_project 2 169993639 170038244 + MGP_CBAJ_P0058123 protein_coding protein_coding MGP_CBAJ_T0058124.1 MGP_CBAJ_G0026417.1 mouse_genomes_project 2 169993698 170038201 + MGP_CBAJ_P0058124 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058125.1 MGP_CBAJ_G0026417.1 mouse_genomes_project 2 169993712 170038201 + MGP_CBAJ_P0058125 protein_coding protein_coding MGP_CBAJ_T0052043.1 MGP_CBAJ_G0025034.1 mouse_genomes_project 2 2551999 3034417 - MGP_CBAJ_P0052043 Camk1d protein_coding protein_coding MGP_CBAJ_T0052044.1 MGP_CBAJ_G0025034.1 mouse_genomes_project 2 2557429 2997913 - MGP_CBAJ_P0052044 Camk1d protein_coding protein_coding MGP_CBAJ_T0052045.1 MGP_CBAJ_G0025034.1 mouse_genomes_project 2 2733406 2998267 - Camk1d protein_coding processed_transcript MGP_CBAJ_T0052046.1 MGP_CBAJ_G0025034.1 mouse_genomes_project 2 2866617 3034405 - Camk1d protein_coding processed_transcript MGP_CBAJ_T0059610.1 MGP_CBAJ_G0026733.1 mouse_genomes_project 2 201026376 201028605 + MGP_CBAJ_P0059610 protein_coding protein_coding MGP_CBAJ_T0007228.1 MGP_CBAJ_G0005920.1 mouse_genomes_project 2 145483659 145501600 - Gm14095 lincRNA lincRNA MGP_CBAJ_T0055806.1 MGP_CBAJ_G0025858.1 mouse_genomes_project 2 99881472 99883356 - MGP_CBAJ_P0055806 Mdk protein_coding protein_coding MGP_CBAJ_T0055807.1 MGP_CBAJ_G0025858.1 mouse_genomes_project 2 99881495 99883979 - MGP_CBAJ_P0055807 Mdk protein_coding protein_coding MGP_CBAJ_T0055808.1 MGP_CBAJ_G0025858.1 mouse_genomes_project 2 99881495 99883448 - MGP_CBAJ_P0055808 Mdk protein_coding protein_coding MGP_CBAJ_T0055809.1 MGP_CBAJ_G0025858.1 mouse_genomes_project 2 99881633 99883367 - MGP_CBAJ_P0055809 Mdk protein_coding protein_coding MGP_CBAJ_T0055259.1 MGP_CBAJ_G0025611.1 mouse_genomes_project 2 91067955 91125005 - MGP_CBAJ_P0055259 protein_coding protein_coding MGP_CBAJ_T0055260.1 MGP_CBAJ_G0025611.1 mouse_genomes_project 2 91067955 91125005 - MGP_CBAJ_P0055260 protein_coding protein_coding MGP_CBAJ_T0055261.1 MGP_CBAJ_G0025611.1 mouse_genomes_project 2 91067955 91125005 - MGP_CBAJ_P0055261 protein_coding protein_coding MGP_CBAJ_T0055262.1 MGP_CBAJ_G0025611.1 mouse_genomes_project 2 91067955 91125005 - MGP_CBAJ_P0055262 protein_coding protein_coding MGP_CBAJ_T0055263.1 MGP_CBAJ_G0025611.1 mouse_genomes_project 2 91067955 91125005 - MGP_CBAJ_P0055263 protein_coding protein_coding MGP_CBAJ_T0055264.1 MGP_CBAJ_G0025611.1 mouse_genomes_project 2 91067957 91125005 - MGP_CBAJ_P0055264 protein_coding protein_coding MGP_CBAJ_T0055265.1 MGP_CBAJ_G0025611.1 mouse_genomes_project 2 91067957 91125005 - MGP_CBAJ_P0055265 protein_coding protein_coding MGP_CBAJ_T0055266.1 MGP_CBAJ_G0025611.1 mouse_genomes_project 2 91067957 91125005 - MGP_CBAJ_P0055266 protein_coding protein_coding MGP_CBAJ_T0055267.1 MGP_CBAJ_G0025611.1 mouse_genomes_project 2 91068665 91125000 - MGP_CBAJ_P0055267 protein_coding protein_coding MGP_CBAJ_T0055268.1 MGP_CBAJ_G0025611.1 mouse_genomes_project 2 91068667 91124802 - protein_coding processed_transcript MGP_CBAJ_T0055269.1 MGP_CBAJ_G0025611.1 mouse_genomes_project 2 91068667 91123269 - MGP_CBAJ_P0055269 protein_coding protein_coding MGP_CBAJ_T0055270.1 MGP_CBAJ_G0025611.1 mouse_genomes_project 2 91068667 91124772 - MGP_CBAJ_P0055270 protein_coding protein_coding MGP_CBAJ_T0055272.1 MGP_CBAJ_G0025611.1 mouse_genomes_project 2 91070412 91080435 - protein_coding processed_transcript MGP_CBAJ_T0055273.1 MGP_CBAJ_G0025611.1 mouse_genomes_project 2 91070508 91080455 - protein_coding processed_transcript MGP_CBAJ_T0055274.1 MGP_CBAJ_G0025611.1 mouse_genomes_project 2 91070771 91125012 - MGP_CBAJ_P0055274 protein_coding protein_coding MGP_CBAJ_T0055275.1 MGP_CBAJ_G0025611.1 mouse_genomes_project 2 91079744 91083339 - protein_coding processed_transcript MGP_CBAJ_T0055276.1 MGP_CBAJ_G0025611.1 mouse_genomes_project 2 91095162 91109777 - protein_coding processed_transcript MGP_CBAJ_T0055277.1 MGP_CBAJ_G0025611.1 mouse_genomes_project 2 91095201 91122326 - protein_coding processed_transcript MGP_CBAJ_T0058603.1 MGP_CBAJ_G0026501.1 mouse_genomes_project 2 176988120 177127872 - Zhx3 protein_coding processed_transcript MGP_CBAJ_T0058611.1 MGP_CBAJ_G0026501.1 mouse_genomes_project 2 177004597 177127446 - MGP_CBAJ_P0058611 Zhx3 protein_coding protein_coding MGP_CBAJ_T0058612.1 MGP_CBAJ_G0026501.1 mouse_genomes_project 2 177005194 177114545 - MGP_CBAJ_P0058612 Zhx3 protein_coding protein_coding MGP_CBAJ_T0058613.1 MGP_CBAJ_G0026501.1 mouse_genomes_project 2 177009854 177127864 - MGP_CBAJ_P0058613 Zhx3 protein_coding protein_coding MGP_CBAJ_T0058614.1 MGP_CBAJ_G0026501.1 mouse_genomes_project 2 177021311 177127703 - MGP_CBAJ_P0058614 Zhx3 protein_coding protein_coding MGP_CBAJ_T0058615.1 MGP_CBAJ_G0026501.1 mouse_genomes_project 2 177021348 177127864 - MGP_CBAJ_P0058615 Zhx3 protein_coding protein_coding MGP_CBAJ_T0052670.1 MGP_CBAJ_G0025138.1 mouse_genomes_project 2 24658607 24660877 - MGP_CBAJ_P0052670 Tubb4b protein_coding protein_coding MGP_CBAJ_T0052671.1 MGP_CBAJ_G0025138.1 mouse_genomes_project 2 24659697 24660829 - Tubb4b protein_coding processed_transcript MGP_CBAJ_T0013601.1 MGP_CBAJ_G0011713.1 mouse_genomes_project 2 154714471 154714956 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010210.1 MGP_CBAJ_G0008348.1 mouse_genomes_project 2 8368653 8368774 + Gm22072 miRNA miRNA MGP_CBAJ_T0013361.1 MGP_CBAJ_G0011473.1 mouse_genomes_project 2 55448768 55449051 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007027.1 MGP_CBAJ_G0005761.1 mouse_genomes_project 2 3909254 3917392 + Gm13391 lincRNA lincRNA MGP_CBAJ_T0007028.1 MGP_CBAJ_G0005761.1 mouse_genomes_project 2 3909525 3910366 + Gm13391 lincRNA lincRNA MGP_CBAJ_T0057959.1 MGP_CBAJ_G0026373.1 mouse_genomes_project 2 167857585 167868442 + MGP_CBAJ_P0057959 Cox4i2 protein_coding protein_coding MGP_CBAJ_T0057960.1 MGP_CBAJ_G0026373.1 mouse_genomes_project 2 167858506 167868439 + MGP_CBAJ_P0057960 Cox4i2 protein_coding protein_coding MGP_CBAJ_T0099130.1 MGP_CBAJ_G0037385.1 mouse_genomes_project 2 145762886 145762989 + Gm22245 snRNA snRNA MGP_CBAJ_T0013312.1 MGP_CBAJ_G0011424.1 mouse_genomes_project 2 36473887 36474194 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001004.1 MGP_CBAJ_G0000936.1 mouse_genomes_project 2 11227717 11229330 + TEC TEC MGP_CBAJ_T0017642.1 MGP_CBAJ_G0015228.1 mouse_genomes_project 2 174326955 174330099 - Snhg17 processed_transcript lincRNA MGP_CBAJ_T0017643.1 MGP_CBAJ_G0015228.1 mouse_genomes_project 2 174328562 174334766 - Snhg17 processed_transcript lincRNA MGP_CBAJ_T0017644.1 MGP_CBAJ_G0015228.1 mouse_genomes_project 2 174329020 174334836 - Snhg17 processed_transcript lincRNA MGP_CBAJ_T0017645.1 MGP_CBAJ_G0015228.1 mouse_genomes_project 2 174329020 174334775 - Snhg17 processed_transcript lincRNA MGP_CBAJ_T0017646.1 MGP_CBAJ_G0015228.1 mouse_genomes_project 2 174329020 174334778 - Snhg17 processed_transcript retained_intron MGP_CBAJ_T0017647.1 MGP_CBAJ_G0015228.1 mouse_genomes_project 2 174329040 174334769 - Snhg17 processed_transcript retained_intron MGP_CBAJ_T0017648.1 MGP_CBAJ_G0015228.1 mouse_genomes_project 2 174329277 174331719 - Snhg17 processed_transcript lincRNA MGP_CBAJ_T0017649.1 MGP_CBAJ_G0015228.1 mouse_genomes_project 2 174332493 174334731 - Snhg17 processed_transcript lincRNA MGP_CBAJ_T0017650.1 MGP_CBAJ_G0015228.1 mouse_genomes_project 2 174334122 174334798 - Snhg17 processed_transcript lincRNA MGP_CBAJ_T0013400.1 MGP_CBAJ_G0011512.1 mouse_genomes_project 2 70456578 70456800 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004068.1 MGP_CBAJ_G0003596.1 mouse_genomes_project 2 174143239 174146981 + 1700060C20Rik antisense antisense MGP_CBAJ_T0057695.1 MGP_CBAJ_G0026290.1 mouse_genomes_project 2 158746888 158928393 + MGP_CBAJ_P0057695 Dtd1 protein_coding protein_coding MGP_CBAJ_T0057696.1 MGP_CBAJ_G0026290.1 mouse_genomes_project 2 158759460 158928075 + Dtd1 protein_coding processed_transcript MGP_CBAJ_T0057697.1 MGP_CBAJ_G0026290.1 mouse_genomes_project 2 158823104 158904338 + Dtd1 protein_coding processed_transcript MGP_CBAJ_T0057698.1 MGP_CBAJ_G0026290.1 mouse_genomes_project 2 158886038 158928129 + Dtd1 protein_coding processed_transcript MGP_CBAJ_T0057699.1 MGP_CBAJ_G0026290.1 mouse_genomes_project 2 158895747 158927910 + Dtd1 protein_coding processed_transcript MGP_CBAJ_T0004030.1 MGP_CBAJ_G0003564.1 mouse_genomes_project 2 155014027 155024857 - antisense antisense MGP_CBAJ_T0004032.1 MGP_CBAJ_G0003564.1 mouse_genomes_project 2 155016341 155016728 - antisense antisense MGP_CBAJ_T0052556.1 MGP_CBAJ_G0025122.1 mouse_genomes_project 2 23739578 23798488 - MGP_CBAJ_P0052556 Pax8 protein_coding protein_coding MGP_CBAJ_T0052557.1 MGP_CBAJ_G0025122.1 mouse_genomes_project 2 23740412 23742101 - Pax8 protein_coding retained_intron MGP_CBAJ_T0052558.1 MGP_CBAJ_G0025122.1 mouse_genomes_project 2 23740538 23797986 - MGP_CBAJ_P0052558 Pax8 protein_coding protein_coding MGP_CBAJ_T0052559.1 MGP_CBAJ_G0025122.1 mouse_genomes_project 2 23740566 23797986 - MGP_CBAJ_P0052559 Pax8 protein_coding protein_coding MGP_CBAJ_T0052560.1 MGP_CBAJ_G0025122.1 mouse_genomes_project 2 23748535 23798463 - MGP_CBAJ_P0052560 Pax8 protein_coding protein_coding MGP_CBAJ_T0052561.1 MGP_CBAJ_G0025122.1 mouse_genomes_project 2 23762132 23798104 - MGP_CBAJ_P0052561 Pax8 protein_coding protein_coding MGP_CBAJ_T0052562.1 MGP_CBAJ_G0025122.1 mouse_genomes_project 2 23763953 23766856 - Pax8 protein_coding processed_transcript MGP_CBAJ_T0052563.1 MGP_CBAJ_G0025122.1 mouse_genomes_project 2 23794774 23798463 - Pax8 protein_coding retained_intron MGP_CBAJ_T0055388.1 MGP_CBAJ_G0025664.1 mouse_genomes_project 2 92811065 92812007 - MGP_CBAJ_P0055388 protein_coding protein_coding MGP_CBAJ_T0013552.1 MGP_CBAJ_G0011664.1 mouse_genomes_project 2 129597884 129598749 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0058700.1 MGP_CBAJ_G0026522.1 mouse_genomes_project 2 180226830 180296471 + Pkig protein_coding retained_intron MGP_CBAJ_T0058701.1 MGP_CBAJ_G0026522.1 mouse_genomes_project 2 180226830 180298871 + MGP_CBAJ_P0058701 Pkig protein_coding protein_coding MGP_CBAJ_T0058702.1 MGP_CBAJ_G0026522.1 mouse_genomes_project 2 180226843 180298867 + MGP_CBAJ_P0058702 Pkig protein_coding protein_coding MGP_CBAJ_T0058703.1 MGP_CBAJ_G0026522.1 mouse_genomes_project 2 180226859 180298401 + MGP_CBAJ_P0058703 Pkig protein_coding protein_coding MGP_CBAJ_T0058704.1 MGP_CBAJ_G0026522.1 mouse_genomes_project 2 180226902 180293911 + MGP_CBAJ_P0058704 Pkig protein_coding protein_coding MGP_CBAJ_T0058705.1 MGP_CBAJ_G0026522.1 mouse_genomes_project 2 180226921 180298504 + MGP_CBAJ_P0058705 Pkig protein_coding protein_coding MGP_CBAJ_T0058706.1 MGP_CBAJ_G0026522.1 mouse_genomes_project 2 180226924 180298231 + MGP_CBAJ_P0058706 Pkig protein_coding protein_coding MGP_CBAJ_T0058707.1 MGP_CBAJ_G0026522.1 mouse_genomes_project 2 180229943 180298186 + MGP_CBAJ_P0058707 Pkig protein_coding protein_coding MGP_CBAJ_T0058708.1 MGP_CBAJ_G0026522.1 mouse_genomes_project 2 180265597 180298865 + MGP_CBAJ_P0058708 Pkig protein_coding protein_coding MGP_CBAJ_T0055382.1 MGP_CBAJ_G0025658.1 mouse_genomes_project 2 92635877 92636834 + MGP_CBAJ_P0055382 Olfr1030 protein_coding protein_coding MGP_CBAJ_T0055970.1 MGP_CBAJ_G0025885.1 mouse_genomes_project 2 102702220 102729088 - MGP_CBAJ_P0055970 Api5 protein_coding protein_coding MGP_CBAJ_T0055971.1 MGP_CBAJ_G0025885.1 mouse_genomes_project 2 102706778 102729064 - Api5 protein_coding processed_transcript MGP_CBAJ_T0055972.1 MGP_CBAJ_G0025885.1 mouse_genomes_project 2 102710854 102729232 - Api5 protein_coding retained_intron MGP_CBAJ_T0055973.1 MGP_CBAJ_G0025885.1 mouse_genomes_project 2 102715587 102723082 - Api5 protein_coding processed_transcript MGP_CBAJ_T0100369.1 MGP_CBAJ_G0038624.1 mouse_genomes_project 2 65318652 65318781 + Gm22338 snoRNA snoRNA MGP_CBAJ_T0053116.1 MGP_CBAJ_G0025221.1 mouse_genomes_project 2 26800558 26831929 + MGP_CBAJ_P0053116 Adamtsl2 protein_coding protein_coding MGP_CBAJ_T0053117.1 MGP_CBAJ_G0025221.1 mouse_genomes_project 2 26820245 26831923 + Adamtsl2 protein_coding retained_intron MGP_CBAJ_T0053118.1 MGP_CBAJ_G0025221.1 mouse_genomes_project 2 26820992 26821608 + Adamtsl2 protein_coding processed_transcript MGP_CBAJ_T0053119.1 MGP_CBAJ_G0025221.1 mouse_genomes_project 2 26826735 26830354 + Adamtsl2 protein_coding retained_intron MGP_CBAJ_T0053120.1 MGP_CBAJ_G0025221.1 mouse_genomes_project 2 26827612 26831929 + Adamtsl2 protein_coding retained_intron MGP_CBAJ_T0054250.1 MGP_CBAJ_G0025423.1 mouse_genomes_project 2 40366033 40516671 - MGP_CBAJ_P0054250 Scai protein_coding protein_coding MGP_CBAJ_T0054251.1 MGP_CBAJ_G0025423.1 mouse_genomes_project 2 40374583 40516642 - MGP_CBAJ_P0054251 Scai protein_coding nonsense_mediated_decay MGP_CBAJ_T0054252.1 MGP_CBAJ_G0025423.1 mouse_genomes_project 2 40374825 40516629 - MGP_CBAJ_P0054252 Scai protein_coding nonsense_mediated_decay MGP_CBAJ_T0054253.1 MGP_CBAJ_G0025423.1 mouse_genomes_project 2 40374890 40404545 - MGP_CBAJ_P0054253 Scai protein_coding nonsense_mediated_decay MGP_CBAJ_T0054254.1 MGP_CBAJ_G0025423.1 mouse_genomes_project 2 40382395 40516667 - MGP_CBAJ_P0054254 Scai protein_coding nonsense_mediated_decay MGP_CBAJ_T0054255.1 MGP_CBAJ_G0025423.1 mouse_genomes_project 2 40407324 40516671 - Scai protein_coding retained_intron MGP_CBAJ_T0054256.1 MGP_CBAJ_G0025423.1 mouse_genomes_project 2 40411812 40516667 - Scai protein_coding retained_intron MGP_CBAJ_T0054257.1 MGP_CBAJ_G0025423.1 mouse_genomes_project 2 40415039 40417094 - Scai protein_coding retained_intron MGP_CBAJ_T0054258.1 MGP_CBAJ_G0025423.1 mouse_genomes_project 2 40415188 40429469 - Scai protein_coding retained_intron MGP_CBAJ_T0054259.1 MGP_CBAJ_G0025423.1 mouse_genomes_project 2 40445102 40516665 - MGP_CBAJ_P0054259 Scai protein_coding protein_coding MGP_CBAJ_T0052022.1 MGP_CBAJ_G0025030.1 mouse_genomes_project 2 2169855 2184121 + MGP_CBAJ_P0052022 Ucma protein_coding protein_coding MGP_CBAJ_T0052023.1 MGP_CBAJ_G0025030.1 mouse_genomes_project 2 2169858 2179695 + Ucma protein_coding processed_transcript MGP_CBAJ_T0052024.1 MGP_CBAJ_G0025030.1 mouse_genomes_project 2 2169884 2184113 + MGP_CBAJ_P0052024 Ucma protein_coding protein_coding MGP_CBAJ_T0052025.1 MGP_CBAJ_G0025030.1 mouse_genomes_project 2 2169914 2184118 + MGP_CBAJ_P0052025 Ucma protein_coding protein_coding MGP_CBAJ_T0052026.1 MGP_CBAJ_G0025030.1 mouse_genomes_project 2 2169917 2184018 + MGP_CBAJ_P0052026 Ucma protein_coding protein_coding MGP_CBAJ_T0058937.1 MGP_CBAJ_G0026593.1 mouse_genomes_project 2 182524034 182751775 + MGP_CBAJ_P0058937 Eya2 protein_coding protein_coding MGP_CBAJ_T0058938.1 MGP_CBAJ_G0026593.1 mouse_genomes_project 2 182597429 182751783 + MGP_CBAJ_P0058938 Eya2 protein_coding protein_coding MGP_CBAJ_T0058939.1 MGP_CBAJ_G0026593.1 mouse_genomes_project 2 182597449 182677302 + Eya2 protein_coding processed_transcript MGP_CBAJ_T0058940.1 MGP_CBAJ_G0026593.1 mouse_genomes_project 2 182671150 182742685 + Eya2 protein_coding processed_transcript MGP_CBAJ_T0058941.1 MGP_CBAJ_G0026593.1 mouse_genomes_project 2 182738234 182743544 + Eya2 protein_coding processed_transcript MGP_CBAJ_T0058942.1 MGP_CBAJ_G0026593.1 mouse_genomes_project 2 182745775 182751322 + Eya2 protein_coding processed_transcript MGP_CBAJ_T0003871.1 MGP_CBAJ_G0003454.1 mouse_genomes_project 2 32089628 32101874 - Gm13427 antisense antisense MGP_CBAJ_T0055373.1 MGP_CBAJ_G0025650.1 mouse_genomes_project 2 92439903 92440839 + MGP_CBAJ_P0055373 Olfr1018 protein_coding protein_coding MGP_CBAJ_T0056278.1 MGP_CBAJ_G0025960.1 mouse_genomes_project 2 121629844 121630397 + MGP_CBAJ_P0056278 protein_coding protein_coding MGP_CBAJ_T0054447.1 MGP_CBAJ_G0025453.1 mouse_genomes_project 2 57560932 58312448 + MGP_CBAJ_P0054447 Galnt13 protein_coding protein_coding MGP_CBAJ_T0054448.1 MGP_CBAJ_G0025453.1 mouse_genomes_project 2 57561002 58312448 + MGP_CBAJ_P0054448 Galnt13 protein_coding protein_coding MGP_CBAJ_T0054449.1 MGP_CBAJ_G0025453.1 mouse_genomes_project 2 57561002 58312448 + MGP_CBAJ_P0054449 Galnt13 protein_coding protein_coding MGP_CBAJ_T0054450.1 MGP_CBAJ_G0025453.1 mouse_genomes_project 2 57561106 57879493 + MGP_CBAJ_P0054450 Galnt13 protein_coding protein_coding MGP_CBAJ_T0054451.1 MGP_CBAJ_G0025453.1 mouse_genomes_project 2 57663510 58307294 + MGP_CBAJ_P0054451 Galnt13 protein_coding protein_coding MGP_CBAJ_T0057950.1 MGP_CBAJ_G0026370.1 mouse_genomes_project 2 167761819 167801732 + MGP_CBAJ_P0057950 H13 protein_coding protein_coding MGP_CBAJ_T0057951.1 MGP_CBAJ_G0026370.1 mouse_genomes_project 2 167761844 167776523 + H13 protein_coding retained_intron MGP_CBAJ_T0057952.1 MGP_CBAJ_G0026370.1 mouse_genomes_project 2 167761846 167798122 + MGP_CBAJ_P0057952 H13 protein_coding protein_coding MGP_CBAJ_T0057953.1 MGP_CBAJ_G0026370.1 mouse_genomes_project 2 167761846 167779788 + MGP_CBAJ_P0057953 H13 protein_coding protein_coding MGP_CBAJ_T0057954.1 MGP_CBAJ_G0026370.1 mouse_genomes_project 2 167761892 167797214 + MGP_CBAJ_P0057954 H13 protein_coding protein_coding MGP_CBAJ_T0057956.1 MGP_CBAJ_G0026370.1 mouse_genomes_project 2 167784955 167789353 + H13 protein_coding retained_intron MGP_CBAJ_T0056926.1 MGP_CBAJ_G0026111.1 mouse_genomes_project 2 133933906 133974476 + MGP_CBAJ_P0056926 Duox1 protein_coding protein_coding MGP_CBAJ_T0004053.1 MGP_CBAJ_G0003582.1 mouse_genomes_project 2 167611627 167615852 - Gm14161 antisense antisense MGP_CBAJ_T0007233.1 MGP_CBAJ_G0005924.1 mouse_genomes_project 2 146540481 146543148 + Gm14100 lincRNA lincRNA MGP_CBAJ_T0056642.1 MGP_CBAJ_G0026062.1 mouse_genomes_project 2 131737469 131757813 + Ganc protein_coding processed_transcript MGP_CBAJ_T0056643.1 MGP_CBAJ_G0026062.1 mouse_genomes_project 2 131737774 131753662 + Ganc protein_coding processed_transcript MGP_CBAJ_T0056644.1 MGP_CBAJ_G0026062.1 mouse_genomes_project 2 131737775 131796662 + Ganc protein_coding processed_transcript MGP_CBAJ_T0056645.1 MGP_CBAJ_G0026062.1 mouse_genomes_project 2 131737783 131758564 + Ganc protein_coding processed_transcript MGP_CBAJ_T0056646.1 MGP_CBAJ_G0026062.1 mouse_genomes_project 2 131737797 131802402 + Ganc protein_coding processed_transcript MGP_CBAJ_T0056647.1 MGP_CBAJ_G0026062.1 mouse_genomes_project 2 131737887 131753660 + Ganc protein_coding processed_transcript MGP_CBAJ_T0056648.1 MGP_CBAJ_G0026062.1 mouse_genomes_project 2 131737911 131749828 + Ganc protein_coding processed_transcript MGP_CBAJ_T0056649.1 MGP_CBAJ_G0026062.1 mouse_genomes_project 2 131738341 131803261 + MGP_CBAJ_P0056649 Ganc protein_coding protein_coding MGP_CBAJ_T0056650.1 MGP_CBAJ_G0026062.1 mouse_genomes_project 2 131738347 131748531 + Ganc protein_coding processed_transcript MGP_CBAJ_T0056651.1 MGP_CBAJ_G0026062.1 mouse_genomes_project 2 131738553 131802426 + Ganc protein_coding processed_transcript MGP_CBAJ_T0056652.1 MGP_CBAJ_G0026062.1 mouse_genomes_project 2 131739699 131801775 + Ganc protein_coding processed_transcript MGP_CBAJ_T0056653.1 MGP_CBAJ_G0026062.1 mouse_genomes_project 2 131745777 131776028 + Ganc protein_coding retained_intron MGP_CBAJ_T0056654.1 MGP_CBAJ_G0026062.1 mouse_genomes_project 2 131757654 131768141 + Ganc protein_coding processed_transcript MGP_CBAJ_T0056655.1 MGP_CBAJ_G0026062.1 mouse_genomes_project 2 131791898 131801897 + Ganc protein_coding retained_intron MGP_CBAJ_T0058065.1 MGP_CBAJ_G0026399.1 mouse_genomes_project 2 169250914 169265651 + MGP_CBAJ_P0058065 Bpifb3 protein_coding protein_coding MGP_CBAJ_T0058066.1 MGP_CBAJ_G0026399.1 mouse_genomes_project 2 169251078 169265648 + MGP_CBAJ_P0058066 Bpifb3 protein_coding protein_coding MGP_CBAJ_T0057541.1 MGP_CBAJ_G0026254.1 mouse_genomes_project 2 148957976 149054692 + Plcb4 protein_coding processed_transcript MGP_CBAJ_T0057542.1 MGP_CBAJ_G0026254.1 mouse_genomes_project 2 148958519 149054779 + Plcb4 protein_coding processed_transcript MGP_CBAJ_T0057543.1 MGP_CBAJ_G0026254.1 mouse_genomes_project 2 148958580 149203590 + Plcb4 protein_coding retained_intron MGP_CBAJ_T0057544.1 MGP_CBAJ_G0026254.1 mouse_genomes_project 2 148958676 149313186 + MGP_CBAJ_P0057544 Plcb4 protein_coding protein_coding MGP_CBAJ_T0057545.1 MGP_CBAJ_G0026254.1 mouse_genomes_project 2 149053770 149236311 + Plcb4 protein_coding retained_intron MGP_CBAJ_T0057546.1 MGP_CBAJ_G0026254.1 mouse_genomes_project 2 149053770 149351044 + MGP_CBAJ_P0057546 Plcb4 protein_coding protein_coding MGP_CBAJ_T0057547.1 MGP_CBAJ_G0026254.1 mouse_genomes_project 2 149053770 149349718 + MGP_CBAJ_P0057547 Plcb4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057548.1 MGP_CBAJ_G0026254.1 mouse_genomes_project 2 149080578 149234235 + Plcb4 protein_coding processed_transcript MGP_CBAJ_T0057549.1 MGP_CBAJ_G0026254.1 mouse_genomes_project 2 149122135 149349517 + MGP_CBAJ_P0057549 Plcb4 protein_coding protein_coding MGP_CBAJ_T0057550.1 MGP_CBAJ_G0026254.1 mouse_genomes_project 2 149213462 149269526 + Plcb4 protein_coding processed_transcript MGP_CBAJ_T0057551.1 MGP_CBAJ_G0026254.1 mouse_genomes_project 2 149272292 149280573 + Plcb4 protein_coding processed_transcript MGP_CBAJ_T0057552.1 MGP_CBAJ_G0026254.1 mouse_genomes_project 2 149276690 149280526 + Plcb4 protein_coding processed_transcript MGP_CBAJ_T0057553.1 MGP_CBAJ_G0026254.1 mouse_genomes_project 2 149313201 149318358 + Plcb4 protein_coding processed_transcript MGP_CBAJ_T0057554.1 MGP_CBAJ_G0026254.1 mouse_genomes_project 2 149318037 149351044 + MGP_CBAJ_P0057554 Plcb4 protein_coding protein_coding MGP_CBAJ_T0057555.1 MGP_CBAJ_G0026254.1 mouse_genomes_project 2 149343678 149344492 + Plcb4 protein_coding processed_transcript MGP_CBAJ_T0055549.1 MGP_CBAJ_G0025803.1 mouse_genomes_project 2 97160704 97161649 - MGP_CBAJ_P0055549 Olfr1247 protein_coding protein_coding MGP_CBAJ_T0055550.1 MGP_CBAJ_G0025803.1 mouse_genomes_project 2 97160704 97166820 - MGP_CBAJ_P0055550 Olfr1247 protein_coding protein_coding MGP_CBAJ_T0055551.1 MGP_CBAJ_G0025803.1 mouse_genomes_project 2 97161405 97163248 - MGP_CBAJ_P0055551 Olfr1247 protein_coding protein_coding MGP_CBAJ_T0007317.1 MGP_CBAJ_G0005994.1 mouse_genomes_project 2 187407084 187696942 - lincRNA lincRNA MGP_CBAJ_T0007318.1 MGP_CBAJ_G0005994.1 mouse_genomes_project 2 187407114 187696942 - lincRNA lincRNA MGP_CBAJ_T0056272.1 MGP_CBAJ_G0025954.1 mouse_genomes_project 2 121437791 121439486 + MGP_CBAJ_P0056272 protein_coding protein_coding MGP_CBAJ_T0052934.1 MGP_CBAJ_G0025191.1 mouse_genomes_project 2 25774471 25805589 - MGP_CBAJ_P0052934 Qsox2 protein_coding protein_coding MGP_CBAJ_T0052935.1 MGP_CBAJ_G0025191.1 mouse_genomes_project 2 25774473 25805762 - MGP_CBAJ_P0052935 Qsox2 protein_coding protein_coding MGP_CBAJ_T0013317.1 MGP_CBAJ_G0011429.1 mouse_genomes_project 2 38315747 38316770 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0054459.1 MGP_CBAJ_G0025456.1 mouse_genomes_project 2 60598855 60749084 + Gpd2 protein_coding processed_transcript MGP_CBAJ_T0054460.1 MGP_CBAJ_G0025456.1 mouse_genomes_project 2 60598898 60751949 + MGP_CBAJ_P0054460 Gpd2 protein_coding protein_coding MGP_CBAJ_T0054461.1 MGP_CBAJ_G0025456.1 mouse_genomes_project 2 60599517 60751949 + MGP_CBAJ_P0054461 Gpd2 protein_coding protein_coding MGP_CBAJ_T0054462.1 MGP_CBAJ_G0025456.1 mouse_genomes_project 2 60599602 60751949 + MGP_CBAJ_P0054462 Gpd2 protein_coding protein_coding MGP_CBAJ_T0054463.1 MGP_CBAJ_G0025456.1 mouse_genomes_project 2 60605607 60675601 + Gpd2 protein_coding processed_transcript MGP_CBAJ_T0054464.1 MGP_CBAJ_G0025456.1 mouse_genomes_project 2 60626629 60629603 + Gpd2 protein_coding processed_transcript MGP_CBAJ_T0054465.1 MGP_CBAJ_G0025456.1 mouse_genomes_project 2 60628872 60629603 + Gpd2 protein_coding processed_transcript MGP_CBAJ_T0099102.1 MGP_CBAJ_G0037357.1 mouse_genomes_project 2 40328034 40328141 + Gm26127 snRNA snRNA MGP_CBAJ_T0053180.1 MGP_CBAJ_G0025234.1 mouse_genomes_project 2 28357152 28360265 + MGP_CBAJ_P0053180 Mrps2 protein_coding protein_coding MGP_CBAJ_T0053181.1 MGP_CBAJ_G0025234.1 mouse_genomes_project 2 28357168 28360252 + Mrps2 protein_coding processed_transcript MGP_CBAJ_T0053182.1 MGP_CBAJ_G0025234.1 mouse_genomes_project 2 28357176 28360252 + Mrps2 protein_coding processed_transcript MGP_CBAJ_T0057838.1 MGP_CBAJ_G0026332.1 mouse_genomes_project 2 165751350 165780574 + Gins1 protein_coding processed_transcript MGP_CBAJ_T0057839.1 MGP_CBAJ_G0026332.1 mouse_genomes_project 2 165755547 165785951 + MGP_CBAJ_P0057839 Gins1 protein_coding protein_coding MGP_CBAJ_T0057840.1 MGP_CBAJ_G0026332.1 mouse_genomes_project 2 165755570 165780768 + Gins1 protein_coding processed_transcript MGP_CBAJ_T0057841.1 MGP_CBAJ_G0026332.1 mouse_genomes_project 2 165762960 165782216 + Gins1 protein_coding processed_transcript MGP_CBAJ_T0056266.1 MGP_CBAJ_G0025949.1 mouse_genomes_project 2 121266437 121314866 - MGP_CBAJ_P0056266 4930430A15Rik protein_coding protein_coding MGP_CBAJ_T0056267.1 MGP_CBAJ_G0025949.1 mouse_genomes_project 2 121297485 121352948 - MGP_CBAJ_P0056267 4930430A15Rik protein_coding protein_coding MGP_CBAJ_T0003870.1 MGP_CBAJ_G0003453.1 mouse_genomes_project 2 32036657 32043794 - Gm13425 antisense antisense MGP_CBAJ_T0056913.1 MGP_CBAJ_G0026106.1 mouse_genomes_project 2 133793637 133812462 + MGP_CBAJ_P0056913 Terb2 protein_coding protein_coding MGP_CBAJ_T0056914.1 MGP_CBAJ_G0026106.1 mouse_genomes_project 2 133793839 133811026 + Terb2 protein_coding processed_transcript MGP_CBAJ_T0059579.1 MGP_CBAJ_G0026729.1 mouse_genomes_project 2 200804754 200810724 + MGP_CBAJ_P0059579 Oprl1 protein_coding protein_coding MGP_CBAJ_T0059580.1 MGP_CBAJ_G0026729.1 mouse_genomes_project 2 200804780 200810714 + MGP_CBAJ_P0059580 Oprl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059581.1 MGP_CBAJ_G0026729.1 mouse_genomes_project 2 200804784 200808329 + MGP_CBAJ_P0059581 Oprl1 protein_coding protein_coding MGP_CBAJ_T0059582.1 MGP_CBAJ_G0026729.1 mouse_genomes_project 2 200804805 200810713 + MGP_CBAJ_P0059582 Oprl1 protein_coding protein_coding MGP_CBAJ_T0059583.1 MGP_CBAJ_G0026729.1 mouse_genomes_project 2 200804821 200810711 + MGP_CBAJ_P0059583 Oprl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059584.1 MGP_CBAJ_G0026729.1 mouse_genomes_project 2 200804832 200810713 + Oprl1 protein_coding processed_transcript MGP_CBAJ_T0059585.1 MGP_CBAJ_G0026729.1 mouse_genomes_project 2 200804839 200806117 + Oprl1 protein_coding processed_transcript MGP_CBAJ_T0059586.1 MGP_CBAJ_G0026729.1 mouse_genomes_project 2 200805086 200810711 + MGP_CBAJ_P0059586 Oprl1 protein_coding protein_coding MGP_CBAJ_T0059587.1 MGP_CBAJ_G0026729.1 mouse_genomes_project 2 200805331 200809090 + MGP_CBAJ_P0059587 Oprl1 protein_coding protein_coding MGP_CBAJ_T0059588.1 MGP_CBAJ_G0026729.1 mouse_genomes_project 2 200805440 200809111 + MGP_CBAJ_P0059588 Oprl1 protein_coding protein_coding MGP_CBAJ_T0059589.1 MGP_CBAJ_G0026729.1 mouse_genomes_project 2 200805441 200809111 + MGP_CBAJ_P0059589 Oprl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053432.1 MGP_CBAJ_G0025274.1 mouse_genomes_project 2 30443390 30463372 + MGP_CBAJ_P0053432 protein_coding protein_coding MGP_CBAJ_T0057701.1 MGP_CBAJ_G0026292.1 mouse_genomes_project 2 159311984 159809937 + MGP_CBAJ_P0057701 Slc24a3 protein_coding protein_coding MGP_CBAJ_T0057702.1 MGP_CBAJ_G0026292.1 mouse_genomes_project 2 159312149 159682205 + Slc24a3 protein_coding processed_transcript MGP_CBAJ_T0057703.1 MGP_CBAJ_G0026292.1 mouse_genomes_project 2 159389464 159809937 + Slc24a3 protein_coding processed_transcript MGP_CBAJ_T0057704.1 MGP_CBAJ_G0026292.1 mouse_genomes_project 2 159389475 159808132 + MGP_CBAJ_P0057704 Slc24a3 protein_coding protein_coding MGP_CBAJ_T0057705.1 MGP_CBAJ_G0026292.1 mouse_genomes_project 2 159775345 159782684 + Slc24a3 protein_coding processed_transcript MGP_CBAJ_T0052238.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10489256 10576941 - Fam188a protein_coding processed_transcript MGP_CBAJ_T0052239.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10489256 10576941 - MGP_CBAJ_P0052239 Fam188a protein_coding nonsense_mediated_decay MGP_CBAJ_T0052240.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10489256 10576937 - MGP_CBAJ_P0052240 Fam188a protein_coding nonsense_mediated_decay MGP_CBAJ_T0052241.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10489256 10576928 - MGP_CBAJ_P0052241 Fam188a protein_coding nonsense_mediated_decay MGP_CBAJ_T0052242.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10489256 10576963 - MGP_CBAJ_P0052242 Fam188a protein_coding protein_coding MGP_CBAJ_T0052243.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10489259 10576945 - MGP_CBAJ_P0052243 Fam188a protein_coding nonsense_mediated_decay MGP_CBAJ_T0052244.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10489625 10498905 - MGP_CBAJ_P0052244 Fam188a protein_coding nonsense_mediated_decay MGP_CBAJ_T0052245.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10489911 10548831 - Fam188a protein_coding retained_intron MGP_CBAJ_T0052246.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10489959 10576781 - Fam188a protein_coding processed_transcript MGP_CBAJ_T0052247.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10492923 10576903 - MGP_CBAJ_P0052247 Fam188a protein_coding protein_coding MGP_CBAJ_T0052248.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10498778 10576924 - Fam188a protein_coding retained_intron MGP_CBAJ_T0052249.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10506323 10508168 - Fam188a protein_coding retained_intron MGP_CBAJ_T0052250.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10506492 10576942 - MGP_CBAJ_P0052250 Fam188a protein_coding protein_coding MGP_CBAJ_T0052251.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10532111 10532947 - Fam188a protein_coding retained_intron MGP_CBAJ_T0052252.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10532812 10564786 - MGP_CBAJ_P0052252 Fam188a protein_coding protein_coding MGP_CBAJ_T0052253.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10552488 10576934 - Fam188a protein_coding retained_intron MGP_CBAJ_T0052254.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10552873 10564925 - Fam188a protein_coding retained_intron MGP_CBAJ_T0052255.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10553888 10576884 - MGP_CBAJ_P0052255 Fam188a protein_coding protein_coding MGP_CBAJ_T0052256.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10553899 10576742 - MGP_CBAJ_P0052256 Fam188a protein_coding nonsense_mediated_decay MGP_CBAJ_T0052257.1 MGP_CBAJ_G0025063.1 mouse_genomes_project 2 10556827 10557559 - Fam188a protein_coding processed_transcript MGP_CBAJ_T0010345.1 MGP_CBAJ_G0008483.1 mouse_genomes_project 2 170859135 170859244 + Mir695 miRNA miRNA MGP_CBAJ_T0057001.1 MGP_CBAJ_G0026129.1 mouse_genomes_project 2 137679728 137751392 - MGP_CBAJ_P0057001 Cep152 protein_coding protein_coding MGP_CBAJ_T0057002.1 MGP_CBAJ_G0026129.1 mouse_genomes_project 2 137680040 137747564 - MGP_CBAJ_P0057002 Cep152 protein_coding unknown_likely_coding MGP_CBAJ_T0017626.1 MGP_CBAJ_G0015219.1 mouse_genomes_project 2 159858313 159897772 + BC039771 processed_transcript processed_transcript MGP_CBAJ_T0017627.1 MGP_CBAJ_G0015219.1 mouse_genomes_project 2 159883977 159950517 + BC039771 processed_transcript processed_transcript MGP_CBAJ_T0013366.1 MGP_CBAJ_G0011478.1 mouse_genomes_project 2 57388714 57390189 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101774.1 MGP_CBAJ_G0039805.1 mouse_genomes_project 2 21683522 21684191 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010209.1 MGP_CBAJ_G0008347.1 mouse_genomes_project 2 6958515 6958592 - Gm23963 miRNA miRNA MGP_CBAJ_T0007324.1 MGP_CBAJ_G0006000.1 mouse_genomes_project 2 189262656 189270004 + 1700007M16Rik lincRNA lincRNA MGP_CBAJ_T0101782.1 MGP_CBAJ_G0039813.1 mouse_genomes_project 2 37601801 37602104 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0059092.1 MGP_CBAJ_G0026620.1 mouse_genomes_project 2 185720923 185722889 + MGP_CBAJ_P0059092 Mocs3 protein_coding protein_coding MGP_CBAJ_T0010239.1 MGP_CBAJ_G0008377.1 mouse_genomes_project 2 8395361 8395455 + Mir466n miRNA miRNA MGP_CBAJ_T0058031.1 MGP_CBAJ_G0026390.1 mouse_genomes_project 2 168637956 168783702 - MGP_CBAJ_P0058031 Nol4l protein_coding protein_coding MGP_CBAJ_T0058032.1 MGP_CBAJ_G0026390.1 mouse_genomes_project 2 168649231 168683734 - Nol4l protein_coding processed_transcript MGP_CBAJ_T0058033.1 MGP_CBAJ_G0026390.1 mouse_genomes_project 2 168705077 168744286 - Nol4l protein_coding processed_transcript MGP_CBAJ_T0058034.1 MGP_CBAJ_G0026390.1 mouse_genomes_project 2 168708876 168731496 - Nol4l protein_coding processed_transcript MGP_CBAJ_T0054998.1 MGP_CBAJ_G0025554.1 mouse_genomes_project 2 79105086 79193199 - MGP_CBAJ_P0054998 Atf2 protein_coding protein_coding MGP_CBAJ_T0054999.1 MGP_CBAJ_G0025554.1 mouse_genomes_project 2 79105097 79193188 - Atf2 protein_coding processed_transcript MGP_CBAJ_T0055000.1 MGP_CBAJ_G0025554.1 mouse_genomes_project 2 79107399 79160334 - MGP_CBAJ_P0055000 Atf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0055001.1 MGP_CBAJ_G0025554.1 mouse_genomes_project 2 79107499 79165001 - MGP_CBAJ_P0055001 Atf2 protein_coding protein_coding MGP_CBAJ_T0055002.1 MGP_CBAJ_G0025554.1 mouse_genomes_project 2 79117076 79193173 - Atf2 protein_coding processed_transcript MGP_CBAJ_T0055003.1 MGP_CBAJ_G0025554.1 mouse_genomes_project 2 79120513 79193090 - MGP_CBAJ_P0055003 Atf2 protein_coding protein_coding MGP_CBAJ_T0055004.1 MGP_CBAJ_G0025554.1 mouse_genomes_project 2 79139872 79193188 - Atf2 protein_coding processed_transcript MGP_CBAJ_T0055005.1 MGP_CBAJ_G0025554.1 mouse_genomes_project 2 79140442 79193153 - MGP_CBAJ_P0055005 Atf2 protein_coding protein_coding MGP_CBAJ_T0055006.1 MGP_CBAJ_G0025554.1 mouse_genomes_project 2 79140443 79193113 - MGP_CBAJ_P0055006 Atf2 protein_coding protein_coding MGP_CBAJ_T0055007.1 MGP_CBAJ_G0025554.1 mouse_genomes_project 2 79140737 79147763 - Atf2 protein_coding processed_transcript MGP_CBAJ_T0055008.1 MGP_CBAJ_G0025554.1 mouse_genomes_project 2 79159971 79193154 - Atf2 protein_coding processed_transcript MGP_CBAJ_T0055009.1 MGP_CBAJ_G0025554.1 mouse_genomes_project 2 79160064 79193188 - Atf2 protein_coding processed_transcript MGP_CBAJ_T0055010.1 MGP_CBAJ_G0025554.1 mouse_genomes_project 2 79171380 79193110 - Atf2 protein_coding processed_transcript MGP_CBAJ_T0055434.1 MGP_CBAJ_G0025709.1 mouse_genomes_project 2 94212449 94223831 + MGP_CBAJ_P0055434 protein_coding protein_coding MGP_CBAJ_T0058115.1 MGP_CBAJ_G0026413.1 mouse_genomes_project 2 169922486 169923987 + MGP_CBAJ_P0058115 Actl10 protein_coding protein_coding MGP_CBAJ_T0059152.1 MGP_CBAJ_G0026634.1 mouse_genomes_project 2 190157175 190164404 - MGP_CBAJ_P0059152 Cbln4 protein_coding protein_coding MGP_CBAJ_T0013253.1 MGP_CBAJ_G0011365.1 mouse_genomes_project 2 13577657 13578741 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013667.1 MGP_CBAJ_G0011779.1 mouse_genomes_project 2 176008908 176009774 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0054397.1 MGP_CBAJ_G0025444.1 mouse_genomes_project 2 54906626 54959986 + MGP_CBAJ_P0054397 Rif1 protein_coding protein_coding MGP_CBAJ_T0054398.1 MGP_CBAJ_G0025444.1 mouse_genomes_project 2 54906631 54959988 + MGP_CBAJ_P0054398 Rif1 protein_coding protein_coding MGP_CBAJ_T0054399.1 MGP_CBAJ_G0025444.1 mouse_genomes_project 2 54906631 54958806 + MGP_CBAJ_P0054399 Rif1 protein_coding unknown_likely_coding MGP_CBAJ_T0054400.1 MGP_CBAJ_G0025444.1 mouse_genomes_project 2 54906861 54910007 + Rif1 protein_coding processed_transcript MGP_CBAJ_T0054401.1 MGP_CBAJ_G0025444.1 mouse_genomes_project 2 54923339 54944597 + Rif1 protein_coding processed_transcript MGP_CBAJ_T0054402.1 MGP_CBAJ_G0025444.1 mouse_genomes_project 2 54926916 54934292 + Rif1 protein_coding processed_transcript MGP_CBAJ_T0054403.1 MGP_CBAJ_G0025444.1 mouse_genomes_project 2 54947764 54959660 + Rif1 protein_coding processed_transcript MGP_CBAJ_T0054404.1 MGP_CBAJ_G0025444.1 mouse_genomes_project 2 54948241 54959713 + Rif1 protein_coding processed_transcript MGP_CBAJ_T0054405.1 MGP_CBAJ_G0025444.1 mouse_genomes_project 2 54948913 54959986 + Rif1 protein_coding processed_transcript MGP_CBAJ_T0000312.1 MGP_CBAJ_G0000257.1 mouse_genomes_project 2 21684192 21684262 - mt-Td Mt_tRNA Mt_tRNA MGP_CBAJ_T0003867.1 MGP_CBAJ_G0003450.1 mouse_genomes_project 2 30584903 30586526 + Gm16323 antisense antisense MGP_CBAJ_T0010329.1 MGP_CBAJ_G0008467.1 mouse_genomes_project 2 134391581 134391660 + Mir147 miRNA miRNA MGP_CBAJ_T0058800.1 MGP_CBAJ_G0026563.1 mouse_genomes_project 2 181495635 181498331 + MGP_CBAJ_P0058800 Spint5 protein_coding protein_coding MGP_CBAJ_T0058801.1 MGP_CBAJ_G0026563.1 mouse_genomes_project 2 181495635 181498331 + MGP_CBAJ_P0058801 Spint5 protein_coding protein_coding MGP_CBAJ_T0055213.1 MGP_CBAJ_G0025600.1 mouse_genomes_project 2 86638484 86690443 + Gm4353 protein_coding retained_intron MGP_CBAJ_T0055215.1 MGP_CBAJ_G0025600.1 mouse_genomes_project 2 86664175 86690439 + MGP_CBAJ_P0055215 Gm4353 protein_coding protein_coding MGP_CBAJ_T0055216.1 MGP_CBAJ_G0025600.1 mouse_genomes_project 2 86664191 86687542 + MGP_CBAJ_P0055216 Gm4353 protein_coding protein_coding MGP_CBAJ_T0055217.1 MGP_CBAJ_G0025600.1 mouse_genomes_project 2 86664627 86671846 + Gm4353 protein_coding processed_transcript MGP_CBAJ_T0055218.1 MGP_CBAJ_G0025600.1 mouse_genomes_project 2 86669584 86682981 + Gm4353 protein_coding processed_transcript MGP_CBAJ_T0010328.1 MGP_CBAJ_G0008466.1 mouse_genomes_project 2 133600726 133600800 + miRNA miRNA MGP_CBAJ_T0098316.1 MGP_CBAJ_G0036583.1 mouse_genomes_project 2 176811467 176813306 + Gm14222 sense_intronic sense_intronic MGP_CBAJ_T0056270.1 MGP_CBAJ_G0025952.1 mouse_genomes_project 2 121397188 121398100 - MGP_CBAJ_P0056270 Olfr1277 protein_coding protein_coding MGP_CBAJ_T0003872.1 MGP_CBAJ_G0003455.1 mouse_genomes_project 2 32354880 32360364 - Gm13441 antisense antisense MGP_CBAJ_T0007113.1 MGP_CBAJ_G0005828.1 mouse_genomes_project 2 68556638 68569636 - Gm13575 lincRNA lincRNA MGP_CBAJ_T0058830.1 MGP_CBAJ_G0026573.1 mouse_genomes_project 2 181632192 181634917 - MGP_CBAJ_P0058830 Neurl2 protein_coding protein_coding MGP_CBAJ_T0058726.1 MGP_CBAJ_G0026530.1 mouse_genomes_project 2 180667235 180690008 + MGP_CBAJ_P0058726 Stk4 protein_coding protein_coding MGP_CBAJ_T0058727.1 MGP_CBAJ_G0026530.1 mouse_genomes_project 2 180677213 180767642 + MGP_CBAJ_P0058727 Stk4 protein_coding protein_coding MGP_CBAJ_T0058728.1 MGP_CBAJ_G0026530.1 mouse_genomes_project 2 180684750 180702140 + Stk4 protein_coding processed_transcript MGP_CBAJ_T0058729.1 MGP_CBAJ_G0026530.1 mouse_genomes_project 2 180704821 180727732 + MGP_CBAJ_P0058729 Stk4 protein_coding protein_coding MGP_CBAJ_T0058730.1 MGP_CBAJ_G0026530.1 mouse_genomes_project 2 180715345 180767642 + MGP_CBAJ_P0058730 Stk4 protein_coding protein_coding MGP_CBAJ_T0057634.1 MGP_CBAJ_G0026274.1 mouse_genomes_project 2 157062171 157065412 + MGP_CBAJ_P0057634 Otor protein_coding protein_coding MGP_CBAJ_T0054229.1 MGP_CBAJ_G0025419.1 mouse_genomes_project 2 40296229 40304909 + MGP_CBAJ_P0054229 Wdr38 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054230.1 MGP_CBAJ_G0025419.1 mouse_genomes_project 2 40297072 40300336 + MGP_CBAJ_P0054230 Wdr38 protein_coding protein_coding MGP_CBAJ_T0054231.1 MGP_CBAJ_G0025419.1 mouse_genomes_project 2 40297085 40299028 + Wdr38 protein_coding processed_transcript MGP_CBAJ_T0099098.1 MGP_CBAJ_G0037353.1 mouse_genomes_project 2 33229064 33229169 - Gm23369 snRNA snRNA MGP_CBAJ_T0056408.1 MGP_CBAJ_G0026010.1 mouse_genomes_project 2 129492362 129533939 + MGP_CBAJ_P0056408 Eif2ak4 protein_coding protein_coding MGP_CBAJ_T0056409.1 MGP_CBAJ_G0026010.1 mouse_genomes_project 2 129492453 129590545 + MGP_CBAJ_P0056409 Eif2ak4 protein_coding protein_coding MGP_CBAJ_T0056410.1 MGP_CBAJ_G0026010.1 mouse_genomes_project 2 129492591 129590537 + MGP_CBAJ_P0056410 Eif2ak4 protein_coding protein_coding MGP_CBAJ_T0056411.1 MGP_CBAJ_G0026010.1 mouse_genomes_project 2 129492856 129590535 + MGP_CBAJ_P0056411 Eif2ak4 protein_coding protein_coding MGP_CBAJ_T0056412.1 MGP_CBAJ_G0026010.1 mouse_genomes_project 2 129492856 129590534 + MGP_CBAJ_P0056412 Eif2ak4 protein_coding protein_coding MGP_CBAJ_T0056413.1 MGP_CBAJ_G0026010.1 mouse_genomes_project 2 129547380 129562699 + MGP_CBAJ_P0056413 Eif2ak4 protein_coding protein_coding MGP_CBAJ_T0056414.1 MGP_CBAJ_G0026010.1 mouse_genomes_project 2 129567527 129572333 + Eif2ak4 protein_coding processed_transcript MGP_CBAJ_T0053434.1 MGP_CBAJ_G0025276.1 mouse_genomes_project 2 30448744 30509194 + MGP_CBAJ_P0053434 protein_coding protein_coding MGP_CBAJ_T0053435.1 MGP_CBAJ_G0025276.1 mouse_genomes_project 2 30448744 30472681 + MGP_CBAJ_P0053435 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053436.1 MGP_CBAJ_G0025276.1 mouse_genomes_project 2 30448764 30466405 + protein_coding processed_transcript MGP_CBAJ_T0053437.1 MGP_CBAJ_G0025276.1 mouse_genomes_project 2 30448771 30466123 + MGP_CBAJ_P0053437 protein_coding protein_coding MGP_CBAJ_T0053438.1 MGP_CBAJ_G0025276.1 mouse_genomes_project 2 30448774 30466122 + MGP_CBAJ_P0053438 protein_coding protein_coding MGP_CBAJ_T0053439.1 MGP_CBAJ_G0025276.1 mouse_genomes_project 2 30448776 30491617 + protein_coding retained_intron MGP_CBAJ_T0053440.1 MGP_CBAJ_G0025276.1 mouse_genomes_project 2 30507867 30509073 + protein_coding retained_intron MGP_CBAJ_T0056264.1 MGP_CBAJ_G0025947.1 mouse_genomes_project 2 121179656 121206385 - MGP_CBAJ_P0056264 Gm13941 protein_coding protein_coding MGP_CBAJ_T0007334.1 MGP_CBAJ_G0006009.1 mouse_genomes_project 2 199776163 199782302 - Gm14340 lincRNA lincRNA MGP_CBAJ_T0013556.1 MGP_CBAJ_G0011668.1 mouse_genomes_project 2 130918887 130919273 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055066.1 MGP_CBAJ_G0025573.1 mouse_genomes_project 2 81531411 81540616 - MGP_CBAJ_P0055066 Ttc30a1 protein_coding protein_coding MGP_CBAJ_T0007162.1 MGP_CBAJ_G0005870.1 mouse_genomes_project 2 101186305 101198524 - Gm13802 lincRNA lincRNA MGP_CBAJ_T0053134.1 MGP_CBAJ_G0025225.1 mouse_genomes_project 2 27002140 27183449 - MGP_CBAJ_P0053134 Vav2 protein_coding unknown_likely_coding MGP_CBAJ_T0053135.1 MGP_CBAJ_G0025225.1 mouse_genomes_project 2 27002144 27183882 - MGP_CBAJ_P0053135 Vav2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053136.1 MGP_CBAJ_G0025225.1 mouse_genomes_project 2 27002144 27184003 - MGP_CBAJ_P0053136 Vav2 protein_coding protein_coding MGP_CBAJ_T0053137.1 MGP_CBAJ_G0025225.1 mouse_genomes_project 2 27008495 27017060 - Vav2 protein_coding processed_transcript MGP_CBAJ_T0053138.1 MGP_CBAJ_G0025225.1 mouse_genomes_project 2 27008959 27018598 - Vav2 protein_coding processed_transcript MGP_CBAJ_T0053139.1 MGP_CBAJ_G0025225.1 mouse_genomes_project 2 27009621 27011839 - Vav2 protein_coding processed_transcript MGP_CBAJ_T0053140.1 MGP_CBAJ_G0025225.1 mouse_genomes_project 2 27009621 27011916 - Vav2 protein_coding processed_transcript MGP_CBAJ_T0053141.1 MGP_CBAJ_G0025225.1 mouse_genomes_project 2 27042495 27087532 - Vav2 protein_coding processed_transcript MGP_CBAJ_T0010332.1 MGP_CBAJ_G0008470.1 mouse_genomes_project 2 141474671 141474777 - Gm22859 miRNA miRNA MGP_CBAJ_T0007033.1 MGP_CBAJ_G0005766.1 mouse_genomes_project 2 7090182 7150305 + Gm13219 lincRNA lincRNA MGP_CBAJ_T0007034.1 MGP_CBAJ_G0005766.1 mouse_genomes_project 2 7090241 7189205 + Gm13219 lincRNA lincRNA MGP_CBAJ_T0007035.1 MGP_CBAJ_G0005766.1 mouse_genomes_project 2 7090271 7151666 + Gm13219 lincRNA lincRNA MGP_CBAJ_T0099095.1 MGP_CBAJ_G0037350.1 mouse_genomes_project 2 27306328 27306454 - Gm25541 snRNA snRNA MGP_CBAJ_T0052458.1 MGP_CBAJ_G0025099.1 mouse_genomes_project 2 20323389 20349585 - MGP_CBAJ_P0052458 Enkur protein_coding protein_coding MGP_CBAJ_T0052459.1 MGP_CBAJ_G0025099.1 mouse_genomes_project 2 20338326 20349459 - Enkur protein_coding processed_transcript MGP_CBAJ_T0052460.1 MGP_CBAJ_G0025099.1 mouse_genomes_project 2 20340677 20349572 - Enkur protein_coding processed_transcript MGP_CBAJ_T0100403.1 MGP_CBAJ_G0038658.1 mouse_genomes_project 2 163202721 163202833 + Gm25866 snoRNA snoRNA MGP_CBAJ_T0013269.1 MGP_CBAJ_G0011381.1 mouse_genomes_project 2 17662208 17662989 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0058745.1 MGP_CBAJ_G0026541.1 mouse_genomes_project 2 181006917 181008588 + MGP_CBAJ_P0058745 Svs5 protein_coding protein_coding MGP_CBAJ_T0058746.1 MGP_CBAJ_G0026541.1 mouse_genomes_project 2 181007641 181008588 + MGP_CBAJ_P0058746 Svs5 protein_coding protein_coding MGP_CBAJ_T0003915.1 MGP_CBAJ_G0003489.1 mouse_genomes_project 2 70791723 70915520 + Gm13629 antisense antisense MGP_CBAJ_T0003916.1 MGP_CBAJ_G0003489.1 mouse_genomes_project 2 70791739 70878034 + Gm13629 antisense antisense MGP_CBAJ_T0017489.1 MGP_CBAJ_G0015143.1 mouse_genomes_project 2 25934038 25953346 + Gm13562 processed_transcript processed_transcript MGP_CBAJ_T0017490.1 MGP_CBAJ_G0015143.1 mouse_genomes_project 2 25946890 25951157 + Gm13562 processed_transcript processed_transcript MGP_CBAJ_T0098313.1 MGP_CBAJ_G0036580.1 mouse_genomes_project 2 142110332 142128710 - Gm14040 sense_intronic sense_intronic MGP_CBAJ_T0007256.1 MGP_CBAJ_G0005943.1 mouse_genomes_project 2 165582798 165585279 - Gm26681 lincRNA lincRNA MGP_CBAJ_T0010321.1 MGP_CBAJ_G0008459.1 mouse_genomes_project 2 124703285 124703340 - Mir7002 miRNA miRNA MGP_CBAJ_T0056918.1 MGP_CBAJ_G0026109.1 mouse_genomes_project 2 133917195 133921230 + MGP_CBAJ_P0056918 Duoxa2 protein_coding protein_coding MGP_CBAJ_T0058562.1 MGP_CBAJ_G0026490.1 mouse_genomes_project 2 174499573 174539752 + MGP_CBAJ_P0058562 Arhgap40 protein_coding protein_coding MGP_CBAJ_T0058563.1 MGP_CBAJ_G0026490.1 mouse_genomes_project 2 174499573 174539897 + MGP_CBAJ_P0058563 Arhgap40 protein_coding protein_coding MGP_CBAJ_T0058564.1 MGP_CBAJ_G0026490.1 mouse_genomes_project 2 174530879 174539897 + Arhgap40 protein_coding retained_intron MGP_CBAJ_T0001052.1 MGP_CBAJ_G0000984.1 mouse_genomes_project 2 75388270 75388991 - TEC TEC MGP_CBAJ_T0010264.1 MGP_CBAJ_G0008402.1 mouse_genomes_project 2 28643848 28643922 + Mir3088 miRNA miRNA MGP_CBAJ_T0011376.1 MGP_CBAJ_G0009514.1 mouse_genomes_project 2 79118377 79118544 - Gm27421 misc_RNA misc_RNA MGP_CBAJ_T0007236.1 MGP_CBAJ_G0005927.1 mouse_genomes_project 2 149128531 149129514 - Gm14210 lincRNA lincRNA MGP_CBAJ_T0013431.1 MGP_CBAJ_G0011543.1 mouse_genomes_project 2 82921828 82922193 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055378.1 MGP_CBAJ_G0025655.1 mouse_genomes_project 2 92537185 92538169 - MGP_CBAJ_P0055378 Olfr1024 protein_coding protein_coding MGP_CBAJ_T0055414.1 MGP_CBAJ_G0025689.1 mouse_genomes_project 2 93637652 93638621 + MGP_CBAJ_P0055414 Olfr1093 protein_coding protein_coding MGP_CBAJ_T0053467.1 MGP_CBAJ_G0025279.1 mouse_genomes_project 2 30562106 30570349 + MGP_CBAJ_P0053467 Dolpp1 protein_coding protein_coding MGP_CBAJ_T0053468.1 MGP_CBAJ_G0025279.1 mouse_genomes_project 2 30562268 30570347 + MGP_CBAJ_P0053468 Dolpp1 protein_coding protein_coding MGP_CBAJ_T0053469.1 MGP_CBAJ_G0025279.1 mouse_genomes_project 2 30562268 30570347 + MGP_CBAJ_P0053469 Dolpp1 protein_coding protein_coding MGP_CBAJ_T0053470.1 MGP_CBAJ_G0025279.1 mouse_genomes_project 2 30562280 30567144 + Dolpp1 protein_coding retained_intron MGP_CBAJ_T0053471.1 MGP_CBAJ_G0025279.1 mouse_genomes_project 2 30562282 30565752 + Dolpp1 protein_coding retained_intron MGP_CBAJ_T0053472.1 MGP_CBAJ_G0025279.1 mouse_genomes_project 2 30562291 30570348 + MGP_CBAJ_P0053472 Dolpp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053473.1 MGP_CBAJ_G0025279.1 mouse_genomes_project 2 30562292 30565997 + Dolpp1 protein_coding retained_intron MGP_CBAJ_T0053474.1 MGP_CBAJ_G0025279.1 mouse_genomes_project 2 30562297 30569508 + MGP_CBAJ_P0053474 Dolpp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053475.1 MGP_CBAJ_G0025279.1 mouse_genomes_project 2 30562306 30567636 + Dolpp1 protein_coding retained_intron MGP_CBAJ_T0053476.1 MGP_CBAJ_G0025279.1 mouse_genomes_project 2 30565438 30570347 + Dolpp1 protein_coding processed_transcript MGP_CBAJ_T0053477.1 MGP_CBAJ_G0025279.1 mouse_genomes_project 2 30567249 30569808 + Dolpp1 protein_coding processed_transcript MGP_CBAJ_T0003991.1 MGP_CBAJ_G0003536.1 mouse_genomes_project 2 129879949 129882992 + Inafm2 antisense antisense MGP_CBAJ_T0058652.1 MGP_CBAJ_G0026509.1 mouse_genomes_project 2 179484876 179517731 + MGP_CBAJ_P0058652 Sgk2 protein_coding protein_coding MGP_CBAJ_T0058653.1 MGP_CBAJ_G0026509.1 mouse_genomes_project 2 179485048 179517730 + MGP_CBAJ_P0058653 Sgk2 protein_coding protein_coding MGP_CBAJ_T0058654.1 MGP_CBAJ_G0026509.1 mouse_genomes_project 2 179497662 179506393 + Sgk2 protein_coding retained_intron MGP_CBAJ_T0055823.1 MGP_CBAJ_G0025860.1 mouse_genomes_project 2 99897384 99899337 + MGP_CBAJ_P0055823 Gm9821 protein_coding protein_coding MGP_CBAJ_T0007200.1 MGP_CBAJ_G0005899.1 mouse_genomes_project 2 126860545 126880259 + G630016G05Rik lincRNA lincRNA MGP_CBAJ_T0007201.1 MGP_CBAJ_G0005899.1 mouse_genomes_project 2 126862407 126880258 + G630016G05Rik lincRNA lincRNA MGP_CBAJ_T0004095.1 MGP_CBAJ_G0003615.1 mouse_genomes_project 2 185038287 185047642 + antisense antisense MGP_CBAJ_T0007302.1 MGP_CBAJ_G0005980.1 mouse_genomes_project 2 185185647 185187089 + 9230111E07Rik lincRNA lincRNA MGP_CBAJ_T0052266.1 MGP_CBAJ_G0025066.1 mouse_genomes_project 2 11322573 11522560 - MGP_CBAJ_P0052266 Rsu1 protein_coding protein_coding MGP_CBAJ_T0052267.1 MGP_CBAJ_G0025066.1 mouse_genomes_project 2 11322764 11522642 - MGP_CBAJ_P0052267 Rsu1 protein_coding protein_coding MGP_CBAJ_T0052268.1 MGP_CBAJ_G0025066.1 mouse_genomes_project 2 11322947 11522621 - MGP_CBAJ_P0052268 Rsu1 protein_coding protein_coding MGP_CBAJ_T0052269.1 MGP_CBAJ_G0025066.1 mouse_genomes_project 2 11418329 11522535 - Rsu1 protein_coding retained_intron MGP_CBAJ_T0052270.1 MGP_CBAJ_G0025066.1 mouse_genomes_project 2 11467094 11522560 - Rsu1 protein_coding retained_intron MGP_CBAJ_T0052271.1 MGP_CBAJ_G0025066.1 mouse_genomes_project 2 11467864 11522497 - MGP_CBAJ_P0052271 Rsu1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0052272.1 MGP_CBAJ_G0025066.1 mouse_genomes_project 2 11469687 11522448 - Rsu1 protein_coding retained_intron MGP_CBAJ_T0052273.1 MGP_CBAJ_G0025066.1 mouse_genomes_project 2 11470200 11522518 - MGP_CBAJ_P0052273 Rsu1 protein_coding protein_coding MGP_CBAJ_T0052274.1 MGP_CBAJ_G0025066.1 mouse_genomes_project 2 11518687 11522538 - Rsu1 protein_coding retained_intron MGP_CBAJ_T0052275.1 MGP_CBAJ_G0025066.1 mouse_genomes_project 2 11521986 11522523 - Rsu1 protein_coding retained_intron MGP_CBAJ_T0017655.1 MGP_CBAJ_G0015230.1 mouse_genomes_project 2 176112127 176148254 + 4933416E03Rik processed_transcript processed_transcript MGP_CBAJ_T0003909.1 MGP_CBAJ_G0003483.1 mouse_genomes_project 2 66792805 66794420 + Gm13569 antisense antisense MGP_CBAJ_T0059577.1 MGP_CBAJ_G0026728.1 mouse_genomes_project 2 200780738 200782400 - MGP_CBAJ_P0059577 Lkaaear1 protein_coding protein_coding MGP_CBAJ_T0059578.1 MGP_CBAJ_G0026728.1 mouse_genomes_project 2 200780741 200781362 - MGP_CBAJ_P0059578 Lkaaear1 protein_coding protein_coding MGP_CBAJ_T0055363.1 MGP_CBAJ_G0025640.1 mouse_genomes_project 2 92004470 92005583 - MGP_CBAJ_P0055363 Olfr995 protein_coding protein_coding MGP_CBAJ_T0058909.1 MGP_CBAJ_G0026585.1 mouse_genomes_project 2 182177817 182212778 - MGP_CBAJ_P0058909 Elmo2 protein_coding protein_coding MGP_CBAJ_T0058910.1 MGP_CBAJ_G0026585.1 mouse_genomes_project 2 182178941 182218431 - MGP_CBAJ_P0058910 Elmo2 protein_coding protein_coding MGP_CBAJ_T0058911.1 MGP_CBAJ_G0026585.1 mouse_genomes_project 2 182178941 182218431 - MGP_CBAJ_P0058911 Elmo2 protein_coding protein_coding MGP_CBAJ_T0058912.1 MGP_CBAJ_G0026585.1 mouse_genomes_project 2 182178941 182188920 - MGP_CBAJ_P0058912 Elmo2 protein_coding protein_coding MGP_CBAJ_T0058913.1 MGP_CBAJ_G0026585.1 mouse_genomes_project 2 182180898 182218431 - MGP_CBAJ_P0058913 Elmo2 protein_coding protein_coding MGP_CBAJ_T0058914.1 MGP_CBAJ_G0026585.1 mouse_genomes_project 2 182180903 182208855 - MGP_CBAJ_P0058914 Elmo2 protein_coding protein_coding MGP_CBAJ_T0058915.1 MGP_CBAJ_G0026585.1 mouse_genomes_project 2 182190221 182206258 - Elmo2 protein_coding processed_transcript MGP_CBAJ_T0058916.1 MGP_CBAJ_G0026585.1 mouse_genomes_project 2 182190610 182203689 - MGP_CBAJ_P0058916 Elmo2 protein_coding protein_coding MGP_CBAJ_T0058917.1 MGP_CBAJ_G0026585.1 mouse_genomes_project 2 182196632 182203579 - Elmo2 protein_coding retained_intron MGP_CBAJ_T0058918.1 MGP_CBAJ_G0026585.1 mouse_genomes_project 2 182200849 182208303 - MGP_CBAJ_P0058918 Elmo2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058919.1 MGP_CBAJ_G0026585.1 mouse_genomes_project 2 182203616 182208527 - MGP_CBAJ_P0058919 Elmo2 protein_coding protein_coding MGP_CBAJ_T0058920.1 MGP_CBAJ_G0026585.1 mouse_genomes_project 2 182207623 182218431 - MGP_CBAJ_P0058920 Elmo2 protein_coding protein_coding MGP_CBAJ_T0052401.1 MGP_CBAJ_G0025089.1 mouse_genomes_project 2 17588589 17593442 + Spag6 protein_coding processed_transcript MGP_CBAJ_T0052402.1 MGP_CBAJ_G0025089.1 mouse_genomes_project 2 17588609 17593595 + Spag6 protein_coding processed_transcript MGP_CBAJ_T0052403.1 MGP_CBAJ_G0025089.1 mouse_genomes_project 2 17593580 17654223 + MGP_CBAJ_P0052403 Spag6 protein_coding protein_coding MGP_CBAJ_T0052404.1 MGP_CBAJ_G0025089.1 mouse_genomes_project 2 17593641 17628976 + MGP_CBAJ_P0052404 Spag6 protein_coding protein_coding MGP_CBAJ_T0058474.1 MGP_CBAJ_G0026473.1 mouse_genomes_project 2 173116817 173127402 + Rpn2 protein_coding processed_transcript MGP_CBAJ_T0058475.1 MGP_CBAJ_G0026473.1 mouse_genomes_project 2 173116859 173164211 + MGP_CBAJ_P0058475 Rpn2 protein_coding protein_coding MGP_CBAJ_T0058476.1 MGP_CBAJ_G0026473.1 mouse_genomes_project 2 173116946 173164211 + MGP_CBAJ_P0058476 Rpn2 protein_coding protein_coding MGP_CBAJ_T0058477.1 MGP_CBAJ_G0026473.1 mouse_genomes_project 2 173117226 173163948 + Rpn2 protein_coding processed_transcript MGP_CBAJ_T0058478.1 MGP_CBAJ_G0026473.1 mouse_genomes_project 2 173117369 173128552 + Rpn2 protein_coding processed_transcript MGP_CBAJ_T0058479.1 MGP_CBAJ_G0026473.1 mouse_genomes_project 2 173121410 173163627 + Rpn2 protein_coding processed_transcript MGP_CBAJ_T0058480.1 MGP_CBAJ_G0026473.1 mouse_genomes_project 2 173132682 173133194 + Rpn2 protein_coding processed_transcript MGP_CBAJ_T0058481.1 MGP_CBAJ_G0026473.1 mouse_genomes_project 2 173152397 173154055 + Rpn2 protein_coding processed_transcript MGP_CBAJ_T0058482.1 MGP_CBAJ_G0026473.1 mouse_genomes_project 2 173154023 173160365 + Rpn2 protein_coding retained_intron MGP_CBAJ_T0058483.1 MGP_CBAJ_G0026473.1 mouse_genomes_project 2 173157701 173160054 + Rpn2 protein_coding retained_intron MGP_CBAJ_T0000999.1 MGP_CBAJ_G0000931.1 mouse_genomes_project 2 10499081 10500483 - TEC TEC MGP_CBAJ_T0056513.1 MGP_CBAJ_G0026033.1 mouse_genomes_project 2 130401535 130417922 - MGP_CBAJ_P0056513 Ppp1r14d protein_coding protein_coding MGP_CBAJ_T0056514.1 MGP_CBAJ_G0026033.1 mouse_genomes_project 2 130401556 130417881 - MGP_CBAJ_P0056514 Ppp1r14d protein_coding protein_coding MGP_CBAJ_T0052972.1 MGP_CBAJ_G0025198.1 mouse_genomes_project 2 25967026 25973541 - MGP_CBAJ_P0052972 Sdccag3 protein_coding protein_coding MGP_CBAJ_T0052973.1 MGP_CBAJ_G0025198.1 mouse_genomes_project 2 25967026 25973516 - MGP_CBAJ_P0052973 Sdccag3 protein_coding protein_coding MGP_CBAJ_T0052974.1 MGP_CBAJ_G0025198.1 mouse_genomes_project 2 25967026 25973522 - MGP_CBAJ_P0052974 Sdccag3 protein_coding protein_coding MGP_CBAJ_T0052975.1 MGP_CBAJ_G0025198.1 mouse_genomes_project 2 25967026 25973529 - MGP_CBAJ_P0052975 Sdccag3 protein_coding protein_coding MGP_CBAJ_T0052976.1 MGP_CBAJ_G0025198.1 mouse_genomes_project 2 25967027 25971806 - Sdccag3 protein_coding processed_transcript MGP_CBAJ_T0052977.1 MGP_CBAJ_G0025198.1 mouse_genomes_project 2 25967779 25969438 - Sdccag3 protein_coding processed_transcript MGP_CBAJ_T0052978.1 MGP_CBAJ_G0025198.1 mouse_genomes_project 2 25967788 25969834 - Sdccag3 protein_coding processed_transcript MGP_CBAJ_T0052979.1 MGP_CBAJ_G0025198.1 mouse_genomes_project 2 25970879 25973508 - Sdccag3 protein_coding processed_transcript MGP_CBAJ_T0052980.1 MGP_CBAJ_G0025198.1 mouse_genomes_project 2 25970879 25973531 - Sdccag3 protein_coding processed_transcript MGP_CBAJ_T0052981.1 MGP_CBAJ_G0025198.1 mouse_genomes_project 2 25971237 25973520 - Sdccag3 protein_coding processed_transcript MGP_CBAJ_T0052982.1 MGP_CBAJ_G0025198.1 mouse_genomes_project 2 25971329 25972919 - MGP_CBAJ_P0052982 Sdccag3 protein_coding protein_coding MGP_CBAJ_T0052983.1 MGP_CBAJ_G0025198.1 mouse_genomes_project 2 25971350 25973492 - Sdccag3 protein_coding processed_transcript MGP_CBAJ_T0052984.1 MGP_CBAJ_G0025198.1 mouse_genomes_project 2 25971780 25973390 - Sdccag3 protein_coding processed_transcript MGP_CBAJ_T0003981.1 MGP_CBAJ_G0003530.1 mouse_genomes_project 2 124004667 124008024 - Gm13964 antisense antisense MGP_CBAJ_T0056279.1 MGP_CBAJ_G0025961.1 mouse_genomes_project 2 121671455 121672394 + MGP_CBAJ_P0056279 Olfr1288 protein_coding protein_coding MGP_CBAJ_T0010342.1 MGP_CBAJ_G0008480.1 mouse_genomes_project 2 166930762 166930851 - Mir1953 miRNA miRNA MGP_CBAJ_T0054496.1 MGP_CBAJ_G0025466.1 mouse_genomes_project 2 62699879 62909214 + MGP_CBAJ_P0054496 Pkp4 protein_coding protein_coding MGP_CBAJ_T0054497.1 MGP_CBAJ_G0025466.1 mouse_genomes_project 2 62699879 62909215 + MGP_CBAJ_P0054497 Pkp4 protein_coding protein_coding MGP_CBAJ_T0054498.1 MGP_CBAJ_G0025466.1 mouse_genomes_project 2 62702395 62908834 + MGP_CBAJ_P0054498 Pkp4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054499.1 MGP_CBAJ_G0025466.1 mouse_genomes_project 2 62702395 62893005 + MGP_CBAJ_P0054499 Pkp4 protein_coding protein_coding MGP_CBAJ_T0054500.1 MGP_CBAJ_G0025466.1 mouse_genomes_project 2 62702423 62909218 + MGP_CBAJ_P0054500 Pkp4 protein_coding protein_coding MGP_CBAJ_T0054501.1 MGP_CBAJ_G0025466.1 mouse_genomes_project 2 62702435 62859459 + Pkp4 protein_coding processed_transcript MGP_CBAJ_T0054502.1 MGP_CBAJ_G0025466.1 mouse_genomes_project 2 62702458 62893008 + MGP_CBAJ_P0054502 Pkp4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054503.1 MGP_CBAJ_G0025466.1 mouse_genomes_project 2 62703342 62757971 + Pkp4 protein_coding processed_transcript MGP_CBAJ_T0054504.1 MGP_CBAJ_G0025466.1 mouse_genomes_project 2 62703342 62859691 + MGP_CBAJ_P0054504 Pkp4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0054505.1 MGP_CBAJ_G0025466.1 mouse_genomes_project 2 62742079 62757986 + Pkp4 protein_coding processed_transcript MGP_CBAJ_T0054506.1 MGP_CBAJ_G0025466.1 mouse_genomes_project 2 62757622 62909217 + MGP_CBAJ_P0054506 Pkp4 protein_coding unknown_likely_coding MGP_CBAJ_T0054507.1 MGP_CBAJ_G0025466.1 mouse_genomes_project 2 62772688 62909215 + MGP_CBAJ_P0054507 Pkp4 protein_coding protein_coding MGP_CBAJ_T0054508.1 MGP_CBAJ_G0025466.1 mouse_genomes_project 2 62817861 62862562 + Pkp4 protein_coding processed_transcript MGP_CBAJ_T0054509.1 MGP_CBAJ_G0025466.1 mouse_genomes_project 2 62876926 62909215 + Pkp4 protein_coding processed_transcript MGP_CBAJ_T0054510.1 MGP_CBAJ_G0025466.1 mouse_genomes_project 2 62896328 62902388 + Pkp4 protein_coding processed_transcript MGP_CBAJ_T0054481.1 MGP_CBAJ_G0025461.1 mouse_genomes_project 2 61896976 62046060 - Acvr1 protein_coding processed_transcript MGP_CBAJ_T0054482.1 MGP_CBAJ_G0025461.1 mouse_genomes_project 2 61971608 62060865 - MGP_CBAJ_P0054482 Acvr1 protein_coding protein_coding MGP_CBAJ_T0054483.1 MGP_CBAJ_G0025461.1 mouse_genomes_project 2 61971617 62099378 - MGP_CBAJ_P0054483 Acvr1 protein_coding protein_coding MGP_CBAJ_T0054485.1 MGP_CBAJ_G0025461.1 mouse_genomes_project 2 62005241 62071008 - MGP_CBAJ_P0054485 Acvr1 protein_coding protein_coding MGP_CBAJ_T0003994.1 MGP_CBAJ_G0003539.1 mouse_genomes_project 2 131324348 131326954 - Gm13999 antisense antisense MGP_CBAJ_T0017522.1 MGP_CBAJ_G0015163.1 mouse_genomes_project 2 60597447 60599729 - A930012O16Rik processed_transcript processed_transcript MGP_CBAJ_T0017523.1 MGP_CBAJ_G0015163.1 mouse_genomes_project 2 60597447 60599729 - A930012O16Rik processed_transcript processed_transcript MGP_CBAJ_T0055482.1 MGP_CBAJ_G0025747.1 mouse_genomes_project 2 95148328 95149294 + MGP_CBAJ_P0055482 Olfr1161 protein_coding protein_coding MGP_CBAJ_T0099116.1 MGP_CBAJ_G0037371.1 mouse_genomes_project 2 92518445 92518625 - Gm24037 snRNA snRNA MGP_CBAJ_T0056515.1 MGP_CBAJ_G0026034.1 mouse_genomes_project 2 130425393 130437687 + MGP_CBAJ_P0056515 Spint1 protein_coding protein_coding MGP_CBAJ_T0056516.1 MGP_CBAJ_G0026034.1 mouse_genomes_project 2 130425508 130437368 + MGP_CBAJ_P0056516 Spint1 protein_coding protein_coding MGP_CBAJ_T0056517.1 MGP_CBAJ_G0026034.1 mouse_genomes_project 2 130425584 130437700 + MGP_CBAJ_P0056517 Spint1 protein_coding protein_coding MGP_CBAJ_T0056518.1 MGP_CBAJ_G0026034.1 mouse_genomes_project 2 130434540 130437075 + Spint1 protein_coding retained_intron MGP_CBAJ_T0056519.1 MGP_CBAJ_G0026034.1 mouse_genomes_project 2 130436377 130437222 + Spint1 protein_coding retained_intron MGP_CBAJ_T0055465.1 MGP_CBAJ_G0025731.1 mouse_genomes_project 2 94828845 94829781 + MGP_CBAJ_P0055465 Olfr1140 protein_coding protein_coding MGP_CBAJ_T0007064.1 MGP_CBAJ_G0005789.1 mouse_genomes_project 2 27930508 27962768 + F730016J06Rik lincRNA lincRNA MGP_CBAJ_T0007065.1 MGP_CBAJ_G0005789.1 mouse_genomes_project 2 27930514 27948897 + F730016J06Rik lincRNA lincRNA MGP_CBAJ_T0007066.1 MGP_CBAJ_G0005789.1 mouse_genomes_project 2 27953252 27960240 + F730016J06Rik lincRNA lincRNA MGP_CBAJ_T0054191.1 MGP_CBAJ_G0025412.1 mouse_genomes_project 2 38959855 39498351 - MGP_CBAJ_P0054191 Dennd1a protein_coding protein_coding MGP_CBAJ_T0054192.1 MGP_CBAJ_G0025412.1 mouse_genomes_project 2 38961936 39014767 - MGP_CBAJ_P0054192 Dennd1a protein_coding protein_coding MGP_CBAJ_T0054193.1 MGP_CBAJ_G0025412.1 mouse_genomes_project 2 38979254 39498366 - MGP_CBAJ_P0054193 Dennd1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0054194.1 MGP_CBAJ_G0025412.1 mouse_genomes_project 2 39102810 39498353 - MGP_CBAJ_P0054194 Dennd1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0054195.1 MGP_CBAJ_G0025412.1 mouse_genomes_project 2 39102855 39498164 - MGP_CBAJ_P0054195 Dennd1a protein_coding protein_coding MGP_CBAJ_T0054196.1 MGP_CBAJ_G0025412.1 mouse_genomes_project 2 39188309 39350249 - Dennd1a protein_coding retained_intron MGP_CBAJ_T0054197.1 MGP_CBAJ_G0025412.1 mouse_genomes_project 2 39210386 39498334 - MGP_CBAJ_P0054197 Dennd1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0054198.1 MGP_CBAJ_G0025412.1 mouse_genomes_project 2 39300181 39498194 - MGP_CBAJ_P0054198 Dennd1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0054199.1 MGP_CBAJ_G0025412.1 mouse_genomes_project 2 39340840 39437662 - Dennd1a protein_coding retained_intron MGP_CBAJ_T0054200.1 MGP_CBAJ_G0025412.1 mouse_genomes_project 2 39345323 39351987 - Dennd1a protein_coding retained_intron MGP_CBAJ_T0054201.1 MGP_CBAJ_G0025412.1 mouse_genomes_project 2 39431557 39498190 - Dennd1a protein_coding retained_intron MGP_CBAJ_T0007171.1 MGP_CBAJ_G0005875.1 mouse_genomes_project 2 104205576 104208082 + Gm13799 lincRNA lincRNA MGP_CBAJ_T0057597.1 MGP_CBAJ_G0026266.1 mouse_genomes_project 2 153806130 153865750 - MGP_CBAJ_P0057597 Esf1 protein_coding protein_coding MGP_CBAJ_T0057598.1 MGP_CBAJ_G0026266.1 mouse_genomes_project 2 153838395 153848256 - Esf1 protein_coding retained_intron MGP_CBAJ_T0057600.1 MGP_CBAJ_G0026266.1 mouse_genomes_project 2 153849836 153855784 - Esf1 protein_coding retained_intron MGP_CBAJ_T0057601.1 MGP_CBAJ_G0026266.1 mouse_genomes_project 2 153849871 153854144 - Esf1 protein_coding retained_intron MGP_CBAJ_T0057602.1 MGP_CBAJ_G0026266.1 mouse_genomes_project 2 153854663 153855784 - Esf1 protein_coding retained_intron MGP_CBAJ_T0010211.1 MGP_CBAJ_G0008349.1 mouse_genomes_project 2 8369126 8369234 + Gm22677 miRNA miRNA MGP_CBAJ_T0013577.1 MGP_CBAJ_G0011689.1 mouse_genomes_project 2 143782858 143783494 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013543.1 MGP_CBAJ_G0011655.1 mouse_genomes_project 2 122134161 122161258 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013314.1 MGP_CBAJ_G0011426.1 mouse_genomes_project 2 37993064 37993560 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098012.1 MGP_CBAJ_G0036285.1 mouse_genomes_project 2 29476972 29477107 + Gm24976 rRNA rRNA MGP_CBAJ_T0010325.1 MGP_CBAJ_G0008463.1 mouse_genomes_project 2 131316866 131316929 + Mir7665 miRNA miRNA MGP_CBAJ_T0004038.1 MGP_CBAJ_G0003569.1 mouse_genomes_project 2 158127179 158137168 - Banf2os antisense antisense MGP_CBAJ_T0004039.1 MGP_CBAJ_G0003569.1 mouse_genomes_project 2 158127606 158137145 - Banf2os antisense antisense MGP_CBAJ_T0057317.1 MGP_CBAJ_G0026207.1 mouse_genomes_project 2 143288048 143289005 + MGP_CBAJ_P0057317 Oxt protein_coding protein_coding MGP_CBAJ_T0010336.1 MGP_CBAJ_G0008474.1 mouse_genomes_project 2 144121107 144121193 + Mir103-2 miRNA miRNA MGP_CBAJ_T0101089.1 MGP_CBAJ_G0039299.1 mouse_genomes_project 2 165088437 165089117 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101090.1 MGP_CBAJ_G0039299.1 mouse_genomes_project 2 165088670 165089426 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0059408.1 MGP_CBAJ_G0026702.1 mouse_genomes_project 2 200005900 200028642 - MGP_CBAJ_P0059408 Chrna4 protein_coding protein_coding MGP_CBAJ_T0059409.1 MGP_CBAJ_G0026702.1 mouse_genomes_project 2 200005901 200015851 - MGP_CBAJ_P0059409 Chrna4 protein_coding protein_coding MGP_CBAJ_T0059410.1 MGP_CBAJ_G0026702.1 mouse_genomes_project 2 200009833 200028872 - MGP_CBAJ_P0059410 Chrna4 protein_coding protein_coding MGP_CBAJ_T0059411.1 MGP_CBAJ_G0026702.1 mouse_genomes_project 2 200016947 200028792 - Chrna4 protein_coding processed_transcript MGP_CBAJ_T0059412.1 MGP_CBAJ_G0026702.1 mouse_genomes_project 2 200021546 200033113 - MGP_CBAJ_P0059412 Chrna4 protein_coding protein_coding MGP_CBAJ_T0013649.1 MGP_CBAJ_G0011761.1 mouse_genomes_project 2 170982409 170982724 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099109.1 MGP_CBAJ_G0037364.1 mouse_genomes_project 2 76490023 76490127 + Gm23253 snRNA snRNA MGP_CBAJ_T0098025.1 MGP_CBAJ_G0036298.1 mouse_genomes_project 2 159503561 159503655 + Gm22731 rRNA rRNA MGP_CBAJ_T0099087.1 MGP_CBAJ_G0037342.1 mouse_genomes_project 2 4887795 4887892 + Gm24340 snRNA snRNA MGP_CBAJ_T0100412.1 MGP_CBAJ_G0038667.1 mouse_genomes_project 2 173608596 173608730 - Gm25407 snoRNA snoRNA MGP_CBAJ_T0007215.1 MGP_CBAJ_G0005909.1 mouse_genomes_project 2 131883450 131890043 + Gm26899 lincRNA lincRNA MGP_CBAJ_T0054648.1 MGP_CBAJ_G0025487.1 mouse_genomes_project 2 68078870 68229608 - MGP_CBAJ_P0054648 Fign protein_coding protein_coding MGP_CBAJ_T0054649.1 MGP_CBAJ_G0025487.1 mouse_genomes_project 2 68086595 68229634 - MGP_CBAJ_P0054649 Fign protein_coding nonsense_mediated_decay MGP_CBAJ_T0054650.1 MGP_CBAJ_G0025487.1 mouse_genomes_project 2 68089705 68229584 - Fign protein_coding processed_transcript MGP_CBAJ_T0054651.1 MGP_CBAJ_G0025487.1 mouse_genomes_project 2 68089874 68229606 - Fign protein_coding processed_transcript MGP_CBAJ_T0013689.1 MGP_CBAJ_G0011801.1 mouse_genomes_project 2 188945547 188946293 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0054097.1 MGP_CBAJ_G0025371.1 mouse_genomes_project 2 37098485 37137159 + MGP_CBAJ_P0054097 Morn5 protein_coding protein_coding MGP_CBAJ_T0010317.1 MGP_CBAJ_G0008455.1 mouse_genomes_project 2 113105678 113105774 - Gm22761 miRNA miRNA MGP_CBAJ_T0056884.1 MGP_CBAJ_G0026097.1 mouse_genomes_project 2 133419479 133495567 + MGP_CBAJ_P0056884 Casc4 protein_coding protein_coding MGP_CBAJ_T0056885.1 MGP_CBAJ_G0026097.1 mouse_genomes_project 2 133419479 133495567 + MGP_CBAJ_P0056885 Casc4 protein_coding protein_coding MGP_CBAJ_T0056886.1 MGP_CBAJ_G0026097.1 mouse_genomes_project 2 133419638 133456156 + Casc4 protein_coding retained_intron MGP_CBAJ_T0056887.1 MGP_CBAJ_G0026097.1 mouse_genomes_project 2 133419639 133463978 + Casc4 protein_coding retained_intron MGP_CBAJ_T0056888.1 MGP_CBAJ_G0026097.1 mouse_genomes_project 2 133419639 133495392 + MGP_CBAJ_P0056888 Casc4 protein_coding protein_coding MGP_CBAJ_T0056889.1 MGP_CBAJ_G0026097.1 mouse_genomes_project 2 133419639 133495354 + MGP_CBAJ_P0056889 Casc4 protein_coding protein_coding MGP_CBAJ_T0056890.1 MGP_CBAJ_G0026097.1 mouse_genomes_project 2 133420214 133493138 + Casc4 protein_coding processed_transcript MGP_CBAJ_T0056891.1 MGP_CBAJ_G0026097.1 mouse_genomes_project 2 133454753 133493103 + MGP_CBAJ_P0056891 Casc4 protein_coding protein_coding MGP_CBAJ_T0010232.1 MGP_CBAJ_G0008370.1 mouse_genomes_project 2 8388030 8388132 + Gm22925 miRNA miRNA MGP_CBAJ_T0053876.1 MGP_CBAJ_G0025339.1 mouse_genomes_project 2 33611844 33654034 - MGP_CBAJ_P0053876 Lrsam1 protein_coding protein_coding MGP_CBAJ_T0053877.1 MGP_CBAJ_G0025339.1 mouse_genomes_project 2 33611848 33654393 - MGP_CBAJ_P0053877 Lrsam1 protein_coding protein_coding MGP_CBAJ_T0053878.1 MGP_CBAJ_G0025339.1 mouse_genomes_project 2 33616219 33631792 - MGP_CBAJ_P0053878 Lrsam1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053879.1 MGP_CBAJ_G0025339.1 mouse_genomes_project 2 33625807 33628762 - Lrsam1 protein_coding retained_intron MGP_CBAJ_T0053880.1 MGP_CBAJ_G0025339.1 mouse_genomes_project 2 33646999 33654378 - MGP_CBAJ_P0053880 Lrsam1 protein_coding protein_coding MGP_CBAJ_T0053881.1 MGP_CBAJ_G0025339.1 mouse_genomes_project 2 33647001 33654371 - MGP_CBAJ_P0053881 Lrsam1 protein_coding protein_coding MGP_CBAJ_T0053882.1 MGP_CBAJ_G0025339.1 mouse_genomes_project 2 33647014 33652685 - MGP_CBAJ_P0053882 Lrsam1 protein_coding protein_coding MGP_CBAJ_T0053883.1 MGP_CBAJ_G0025339.1 mouse_genomes_project 2 33647018 33654030 - MGP_CBAJ_P0053883 Lrsam1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053884.1 MGP_CBAJ_G0025339.1 mouse_genomes_project 2 33650027 33654372 - MGP_CBAJ_P0053884 Lrsam1 protein_coding protein_coding MGP_CBAJ_T0053885.1 MGP_CBAJ_G0025339.1 mouse_genomes_project 2 33650034 33654372 - MGP_CBAJ_P0053885 Lrsam1 protein_coding protein_coding MGP_CBAJ_T0053886.1 MGP_CBAJ_G0025339.1 mouse_genomes_project 2 33653025 33654379 - Lrsam1 protein_coding processed_transcript MGP_CBAJ_T0053887.1 MGP_CBAJ_G0025339.1 mouse_genomes_project 2 33653852 33654385 - Lrsam1 protein_coding processed_transcript MGP_CBAJ_T0100344.1 MGP_CBAJ_G0038599.1 mouse_genomes_project 2 26249619 26249758 - Snhg7 snoRNA snoRNA MGP_CBAJ_T0057331.1 MGP_CBAJ_G0026213.1 mouse_genomes_project 2 143405616 143419565 + MGP_CBAJ_P0057331 Itpa protein_coding protein_coding MGP_CBAJ_T0057332.1 MGP_CBAJ_G0026213.1 mouse_genomes_project 2 143405811 143413966 + Itpa protein_coding retained_intron MGP_CBAJ_T0057333.1 MGP_CBAJ_G0026213.1 mouse_genomes_project 2 143405814 143413673 + Itpa protein_coding processed_transcript MGP_CBAJ_T0057334.1 MGP_CBAJ_G0026213.1 mouse_genomes_project 2 143405832 143410110 + Itpa protein_coding retained_intron MGP_CBAJ_T0057335.1 MGP_CBAJ_G0026213.1 mouse_genomes_project 2 143405871 143418983 + Itpa protein_coding processed_transcript MGP_CBAJ_T0055499.1 MGP_CBAJ_G0025762.1 mouse_genomes_project 2 95893082 95894022 + MGP_CBAJ_P0055499 protein_coding protein_coding MGP_CBAJ_T0056557.1 MGP_CBAJ_G0026048.1 mouse_genomes_project 2 131025388 131050526 - MGP_CBAJ_P0056557 Rpap1 protein_coding protein_coding MGP_CBAJ_T0056558.1 MGP_CBAJ_G0026048.1 mouse_genomes_project 2 131026042 131050550 - MGP_CBAJ_P0056558 Rpap1 protein_coding protein_coding MGP_CBAJ_T0056559.1 MGP_CBAJ_G0026048.1 mouse_genomes_project 2 131026043 131050559 - MGP_CBAJ_P0056559 Rpap1 protein_coding protein_coding MGP_CBAJ_T0056560.1 MGP_CBAJ_G0026048.1 mouse_genomes_project 2 131026046 131050522 - MGP_CBAJ_P0056560 Rpap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056561.1 MGP_CBAJ_G0026048.1 mouse_genomes_project 2 131026049 131050542 - MGP_CBAJ_P0056561 Rpap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0056562.1 MGP_CBAJ_G0026048.1 mouse_genomes_project 2 131028849 131050541 - Rpap1 protein_coding retained_intron MGP_CBAJ_T0056563.1 MGP_CBAJ_G0026048.1 mouse_genomes_project 2 131041221 131050536 - Rpap1 protein_coding retained_intron MGP_CBAJ_T0056564.1 MGP_CBAJ_G0026048.1 mouse_genomes_project 2 131041435 131043589 - Rpap1 protein_coding retained_intron MGP_CBAJ_T0056565.1 MGP_CBAJ_G0026048.1 mouse_genomes_project 2 131041774 131050551 - Rpap1 protein_coding processed_transcript MGP_CBAJ_T0055494.1 MGP_CBAJ_G0025758.1 mouse_genomes_project 2 95779634 95780546 + MGP_CBAJ_P0055494 Olfr1183 protein_coding protein_coding MGP_CBAJ_T0007173.1 MGP_CBAJ_G0005877.1 mouse_genomes_project 2 108167579 108168064 - Gm29235 lincRNA lincRNA MGP_CBAJ_T0057940.1 MGP_CBAJ_G0026363.1 mouse_genomes_project 2 167631254 167631455 + MGP_CBAJ_P0057940 Gm17416 protein_coding protein_coding MGP_CBAJ_T0017539.1 MGP_CBAJ_G0015177.1 mouse_genomes_project 2 93732471 93733790 - Gm13723 processed_transcript processed_transcript MGP_CBAJ_T0004111.1 MGP_CBAJ_G0003627.1 mouse_genomes_project 2 192743639 192757770 - Nespas antisense antisense MGP_CBAJ_T0004112.1 MGP_CBAJ_G0003627.1 mouse_genomes_project 2 192744596 192757723 - Nespas antisense antisense MGP_CBAJ_T0004113.1 MGP_CBAJ_G0003627.1 mouse_genomes_project 2 192746754 192747813 - Nespas antisense antisense MGP_CBAJ_T0057533.1 MGP_CBAJ_G0026253.1 mouse_genomes_project 2 148002045 148777574 + MGP_CBAJ_P0057533 Plcb1 protein_coding protein_coding MGP_CBAJ_T0057534.1 MGP_CBAJ_G0026253.1 mouse_genomes_project 2 148002137 148777585 + MGP_CBAJ_P0057534 Plcb1 protein_coding protein_coding MGP_CBAJ_T0057535.1 MGP_CBAJ_G0026253.1 mouse_genomes_project 2 148002153 148232484 + Plcb1 protein_coding retained_intron MGP_CBAJ_T0057536.1 MGP_CBAJ_G0026253.1 mouse_genomes_project 2 148002207 148533492 + Plcb1 protein_coding retained_intron MGP_CBAJ_T0057537.1 MGP_CBAJ_G0026253.1 mouse_genomes_project 2 148002508 148694599 + MGP_CBAJ_P0057537 Plcb1 protein_coding protein_coding MGP_CBAJ_T0057538.1 MGP_CBAJ_G0026253.1 mouse_genomes_project 2 148499698 148541097 + Plcb1 protein_coding processed_transcript MGP_CBAJ_T0057539.1 MGP_CBAJ_G0026253.1 mouse_genomes_project 2 148499745 148541102 + MGP_CBAJ_P0057539 Plcb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0057540.1 MGP_CBAJ_G0026253.1 mouse_genomes_project 2 148528133 148534381 + Plcb1 protein_coding processed_transcript MGP_CBAJ_T0059155.1 MGP_CBAJ_G0026637.1 mouse_genomes_project 2 190542242 190559910 - MGP_CBAJ_P0059155 Aurka protein_coding unknown_likely_coding MGP_CBAJ_T0059156.1 MGP_CBAJ_G0026637.1 mouse_genomes_project 2 190543013 190552341 - Aurka protein_coding retained_intron MGP_CBAJ_T0059157.1 MGP_CBAJ_G0026637.1 mouse_genomes_project 2 190555758 190559729 - Aurka protein_coding retained_intron MGP_CBAJ_T0052276.1 MGP_CBAJ_G0025067.1 mouse_genomes_project 2 11529776 11762660 - MGP_CBAJ_P0052276 Cubn protein_coding protein_coding MGP_CBAJ_T0052277.1 MGP_CBAJ_G0025067.1 mouse_genomes_project 2 11690367 11724530 - Cubn protein_coding retained_intron MGP_CBAJ_T0052278.1 MGP_CBAJ_G0025067.1 mouse_genomes_project 2 11725542 11728383 - Cubn protein_coding retained_intron MGP_CBAJ_T0057902.1 MGP_CBAJ_G0026347.1 mouse_genomes_project 2 167100960 167104759 + Srxn1 protein_coding processed_transcript MGP_CBAJ_T0057903.1 MGP_CBAJ_G0026347.1 mouse_genomes_project 2 167100960 167104648 + Srxn1 protein_coding processed_transcript MGP_CBAJ_T0057904.1 MGP_CBAJ_G0026347.1 mouse_genomes_project 2 167100968 167106813 + MGP_CBAJ_P0057904 Srxn1 protein_coding protein_coding MGP_CBAJ_T0055403.1 MGP_CBAJ_G0025679.1 mouse_genomes_project 2 93137101 93138043 - MGP_CBAJ_P0055403 protein_coding protein_coding MGP_CBAJ_T0013241.1 MGP_CBAJ_G0011353.1 mouse_genomes_project 2 7343191 7343699 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101780.1 MGP_CBAJ_G0039811.1 mouse_genomes_project 2 37398681 37399620 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010348.1 MGP_CBAJ_G0008486.1 mouse_genomes_project 2 173429689 173429776 - Gm23134 miRNA miRNA MGP_CBAJ_T0059189.1 MGP_CBAJ_G0026648.1 mouse_genomes_project 2 191404022 191442067 - MGP_CBAJ_P0059189 Ctcfl protein_coding protein_coding MGP_CBAJ_T0059190.1 MGP_CBAJ_G0026648.1 mouse_genomes_project 2 191404022 191442067 - MGP_CBAJ_P0059190 Ctcfl protein_coding protein_coding MGP_CBAJ_T0058301.1 MGP_CBAJ_G0026449.1 mouse_genomes_project 2 171659861 171675801 + Spag4 protein_coding retained_intron MGP_CBAJ_T0058302.1 MGP_CBAJ_G0026449.1 mouse_genomes_project 2 171659884 171676925 + Spag4 protein_coding retained_intron MGP_CBAJ_T0058303.1 MGP_CBAJ_G0026449.1 mouse_genomes_project 2 171659913 171675524 + Spag4 protein_coding retained_intron MGP_CBAJ_T0058304.1 MGP_CBAJ_G0026449.1 mouse_genomes_project 2 171659930 171675801 + MGP_CBAJ_P0058304 Spag4 protein_coding protein_coding MGP_CBAJ_T0058305.1 MGP_CBAJ_G0026449.1 mouse_genomes_project 2 171660123 171673625 + MGP_CBAJ_P0058305 Spag4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058306.1 MGP_CBAJ_G0026449.1 mouse_genomes_project 2 171660239 171673832 + MGP_CBAJ_P0058306 Spag4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0058307.1 MGP_CBAJ_G0026449.1 mouse_genomes_project 2 171660428 171674340 + MGP_CBAJ_P0058307 Spag4 protein_coding protein_coding MGP_CBAJ_T0058308.1 MGP_CBAJ_G0026449.1 mouse_genomes_project 2 171661421 171675678 + Spag4 protein_coding processed_transcript MGP_CBAJ_T0057894.1 MGP_CBAJ_G0026342.1 mouse_genomes_project 2 166785613 166819607 + MGP_CBAJ_P0057894 Rspo4 protein_coding protein_coding MGP_CBAJ_T0003925.1 MGP_CBAJ_G0003497.1 mouse_genomes_project 2 76514491 76525949 - Dlx1as antisense antisense MGP_CBAJ_T0003926.1 MGP_CBAJ_G0003497.1 mouse_genomes_project 2 76522069 76525957 - Dlx1as antisense antisense MGP_CBAJ_T0003927.1 MGP_CBAJ_G0003497.1 mouse_genomes_project 2 76525868 76538180 - Dlx1as antisense antisense MGP_CBAJ_T0003928.1 MGP_CBAJ_G0003497.1 mouse_genomes_project 2 76530777 76538261 - Dlx1as antisense antisense MGP_CBAJ_T0055146.1 MGP_CBAJ_G0025587.1 mouse_genomes_project 2 83633080 83690246 - MGP_CBAJ_P0055146 Cwc22 protein_coding protein_coding MGP_CBAJ_T0055147.1 MGP_CBAJ_G0025587.1 mouse_genomes_project 2 83643297 83645195 - Cwc22 protein_coding processed_transcript MGP_CBAJ_T0055148.1 MGP_CBAJ_G0025587.1 mouse_genomes_project 2 83653454 83690270 - Cwc22 protein_coding processed_transcript MGP_CBAJ_T0055149.1 MGP_CBAJ_G0025587.1 mouse_genomes_project 2 83669409 83690254 - Cwc22 protein_coding processed_transcript MGP_CBAJ_T0055150.1 MGP_CBAJ_G0025587.1 mouse_genomes_project 2 83672653 83690009 - MGP_CBAJ_P0055150 Cwc22 protein_coding protein_coding MGP_CBAJ_T0055151.1 MGP_CBAJ_G0025587.1 mouse_genomes_project 2 83672739 83690260 - MGP_CBAJ_P0055151 Cwc22 protein_coding protein_coding MGP_CBAJ_T0055152.1 MGP_CBAJ_G0025587.1 mouse_genomes_project 2 83672795 83681121 - Cwc22 protein_coding processed_transcript MGP_CBAJ_T0055153.1 MGP_CBAJ_G0025587.1 mouse_genomes_project 2 83674141 83681179 - Cwc22 protein_coding processed_transcript MGP_CBAJ_T0057397.1 MGP_CBAJ_G0026224.1 mouse_genomes_project 2 143993636 144001368 - MGP_CBAJ_P0057397 Cenpb protein_coding protein_coding MGP_CBAJ_T0013678.1 MGP_CBAJ_G0011790.1 mouse_genomes_project 2 182957054 182957651 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0053846.1 MGP_CBAJ_G0025334.1 mouse_genomes_project 2 33418837 33426406 + MGP_CBAJ_P0053846 Tor2a protein_coding protein_coding MGP_CBAJ_T0053847.1 MGP_CBAJ_G0025334.1 mouse_genomes_project 2 33418848 33426101 + MGP_CBAJ_P0053847 Tor2a protein_coding protein_coding MGP_CBAJ_T0053848.1 MGP_CBAJ_G0025334.1 mouse_genomes_project 2 33418858 33425892 + MGP_CBAJ_P0053848 Tor2a protein_coding nonsense_mediated_decay MGP_CBAJ_T0053849.1 MGP_CBAJ_G0025334.1 mouse_genomes_project 2 33418863 33426406 + MGP_CBAJ_P0053849 Tor2a protein_coding nonsense_mediated_decay MGP_CBAJ_T0053850.1 MGP_CBAJ_G0025334.1 mouse_genomes_project 2 33418879 33426404 + Tor2a protein_coding retained_intron MGP_CBAJ_T0053851.1 MGP_CBAJ_G0025334.1 mouse_genomes_project 2 33418894 33419587 + Tor2a protein_coding processed_transcript MGP_CBAJ_T0053852.1 MGP_CBAJ_G0025334.1 mouse_genomes_project 2 33418922 33425756 + MGP_CBAJ_P0053852 Tor2a protein_coding protein_coding MGP_CBAJ_T0053853.1 MGP_CBAJ_G0025334.1 mouse_genomes_project 2 33421898 33425951 + Tor2a protein_coding retained_intron MGP_CBAJ_T0055371.1 MGP_CBAJ_G0025648.1 mouse_genomes_project 2 92388679 92389618 + MGP_CBAJ_P0055371 Olfr1015 protein_coding protein_coding MGP_CBAJ_T0053702.1 MGP_CBAJ_G0025313.1 mouse_genomes_project 2 32851874 32877123 + MGP_CBAJ_P0053702 Golga2 protein_coding protein_coding MGP_CBAJ_T0053703.1 MGP_CBAJ_G0025313.1 mouse_genomes_project 2 32852743 32889331 + MGP_CBAJ_P0053703 Golga2 protein_coding protein_coding MGP_CBAJ_T0053704.1 MGP_CBAJ_G0025313.1 mouse_genomes_project 2 32852803 32889322 + MGP_CBAJ_P0053704 Golga2 protein_coding protein_coding MGP_CBAJ_T0053705.1 MGP_CBAJ_G0025313.1 mouse_genomes_project 2 32852823 32884369 + MGP_CBAJ_P0053705 Golga2 protein_coding protein_coding MGP_CBAJ_T0053706.1 MGP_CBAJ_G0025313.1 mouse_genomes_project 2 32852836 32889323 + MGP_CBAJ_P0053706 Golga2 protein_coding protein_coding MGP_CBAJ_T0053707.1 MGP_CBAJ_G0025313.1 mouse_genomes_project 2 32852841 32878657 + MGP_CBAJ_P0053707 Golga2 protein_coding protein_coding MGP_CBAJ_T0053708.1 MGP_CBAJ_G0025313.1 mouse_genomes_project 2 32852845 32883610 + MGP_CBAJ_P0053708 Golga2 protein_coding protein_coding MGP_CBAJ_T0053709.1 MGP_CBAJ_G0025313.1 mouse_genomes_project 2 32878135 32878618 + Golga2 protein_coding retained_intron MGP_CBAJ_T0053710.1 MGP_CBAJ_G0025313.1 mouse_genomes_project 2 32882630 32884359 + Golga2 protein_coding retained_intron MGP_CBAJ_T0010277.1 MGP_CBAJ_G0008415.1 mouse_genomes_project 2 33322886 33322951 + miRNA miRNA MGP_CBAJ_T0007092.1 MGP_CBAJ_G0005809.1 mouse_genomes_project 2 47926424 47947371 + Gm13465 lincRNA lincRNA MGP_CBAJ_T0010302.1 MGP_CBAJ_G0008440.1 mouse_genomes_project 2 86652026 86652112 - Mir684-1 miRNA miRNA MGP_CBAJ_T0100340.1 MGP_CBAJ_G0038595.1 mouse_genomes_project 2 18680762 18680894 + Gm24670 snoRNA snoRNA MGP_CBAJ_T0004002.1 MGP_CBAJ_G0003547.1 mouse_genomes_project 2 141251144 141253653 - Gm14011 antisense antisense MGP_CBAJ_T0057254.1 MGP_CBAJ_G0026191.1 mouse_genomes_project 2 142446061 142475628 + MGP_CBAJ_P0057254 Stk35 protein_coding protein_coding MGP_CBAJ_T0057255.1 MGP_CBAJ_G0026191.1 mouse_genomes_project 2 142446061 142478952 + MGP_CBAJ_P0057255 Stk35 protein_coding protein_coding MGP_CBAJ_T0007234.1 MGP_CBAJ_G0005925.1 mouse_genomes_project 2 148948033 148951030 + Platr3 lincRNA lincRNA MGP_CBAJ_T0057007.1 MGP_CBAJ_G0026132.1 mouse_genomes_project 2 137864874 137917713 - MGP_CBAJ_P0057007 Secisbp2l protein_coding protein_coding MGP_CBAJ_T0057008.1 MGP_CBAJ_G0026132.1 mouse_genomes_project 2 137872710 137894346 - MGP_CBAJ_P0057008 Secisbp2l protein_coding protein_coding MGP_CBAJ_T0057009.1 MGP_CBAJ_G0026132.1 mouse_genomes_project 2 137880244 137882133 - Secisbp2l protein_coding retained_intron MGP_CBAJ_T0053100.1 MGP_CBAJ_G0025218.1 mouse_genomes_project 2 26724015 26730939 + MGP_CBAJ_P0053100 Cacfd1 protein_coding protein_coding MGP_CBAJ_T0053101.1 MGP_CBAJ_G0025218.1 mouse_genomes_project 2 26724015 26731514 + MGP_CBAJ_P0053101 Cacfd1 protein_coding protein_coding MGP_CBAJ_T0053102.1 MGP_CBAJ_G0025218.1 mouse_genomes_project 2 26724015 26735543 + MGP_CBAJ_P0053102 Cacfd1 protein_coding protein_coding MGP_CBAJ_T0053103.1 MGP_CBAJ_G0025218.1 mouse_genomes_project 2 26724015 26735543 + MGP_CBAJ_P0053103 Cacfd1 protein_coding protein_coding MGP_CBAJ_T0053104.1 MGP_CBAJ_G0025218.1 mouse_genomes_project 2 26724102 26732511 + Cacfd1 protein_coding processed_transcript MGP_CBAJ_T0053105.1 MGP_CBAJ_G0025218.1 mouse_genomes_project 2 26724171 26729993 + MGP_CBAJ_P0053105 Cacfd1 protein_coding protein_coding MGP_CBAJ_T0053106.1 MGP_CBAJ_G0025218.1 mouse_genomes_project 2 26724682 26734752 + MGP_CBAJ_P0053106 Cacfd1 protein_coding protein_coding MGP_CBAJ_T0053107.1 MGP_CBAJ_G0025218.1 mouse_genomes_project 2 26729672 26731525 + Cacfd1 protein_coding retained_intron MGP_CBAJ_T0003944.1 MGP_CBAJ_G0003508.1 mouse_genomes_project 2 80066235 80067050 - Gm28793 antisense antisense MGP_CBAJ_T0017536.1 MGP_CBAJ_G0015174.1 mouse_genomes_project 2 83614585 83616300 - Gm13727 processed_transcript processed_transcript MGP_CBAJ_T0055888.1 MGP_CBAJ_G0025872.1 mouse_genomes_project 2 101296784 101316897 + MGP_CBAJ_P0055888 Trp53i11 protein_coding protein_coding MGP_CBAJ_T0055889.1 MGP_CBAJ_G0025872.1 mouse_genomes_project 2 101296784 101319737 + MGP_CBAJ_P0055889 Trp53i11 protein_coding protein_coding MGP_CBAJ_T0055890.1 MGP_CBAJ_G0025872.1 mouse_genomes_project 2 101296797 101317427 + Trp53i11 protein_coding processed_transcript MGP_CBAJ_T0055891.1 MGP_CBAJ_G0025872.1 mouse_genomes_project 2 101296797 101318286 + Trp53i11 protein_coding processed_transcript MGP_CBAJ_T0055892.1 MGP_CBAJ_G0025872.1 mouse_genomes_project 2 101296820 101319727 + MGP_CBAJ_P0055892 Trp53i11 protein_coding protein_coding MGP_CBAJ_T0055893.1 MGP_CBAJ_G0025872.1 mouse_genomes_project 2 101296906 101298799 + Trp53i11 protein_coding processed_transcript MGP_CBAJ_T0055894.1 MGP_CBAJ_G0025872.1 mouse_genomes_project 2 101298427 101319735 + Trp53i11 protein_coding processed_transcript MGP_CBAJ_T0055895.1 MGP_CBAJ_G0025872.1 mouse_genomes_project 2 101316896 101318576 + Trp53i11 protein_coding processed_transcript MGP_CBAJ_T0100382.1 MGP_CBAJ_G0038637.1 mouse_genomes_project 2 105784154 105784283 - Gm23317 snoRNA snoRNA MGP_CBAJ_T0017544.1 MGP_CBAJ_G0015182.1 mouse_genomes_project 2 96170063 96176230 - Gm13760 processed_transcript processed_transcript MGP_CBAJ_T0017545.1 MGP_CBAJ_G0015182.1 mouse_genomes_project 2 96170373 96176702 - Gm13760 processed_transcript processed_transcript MGP_CBAJ_T0007154.1 MGP_CBAJ_G0005862.1 mouse_genomes_project 2 91752980 91765796 + Gm13715 lincRNA lincRNA MGP_CBAJ_T0007235.1 MGP_CBAJ_G0005926.1 mouse_genomes_project 2 148988408 148995090 - Gm14211 lincRNA lincRNA MGP_CBAJ_T0058623.1 MGP_CBAJ_G0026504.1 mouse_genomes_project 2 177227037 177402747 - MGP_CBAJ_P0058623 Chd6 protein_coding protein_coding MGP_CBAJ_T0058624.1 MGP_CBAJ_G0026504.1 mouse_genomes_project 2 177240416 177241996 - Chd6 protein_coding processed_transcript MGP_CBAJ_T0058625.1 MGP_CBAJ_G0026504.1 mouse_genomes_project 2 177240538 177245271 - Chd6 protein_coding processed_transcript MGP_CBAJ_T0058626.1 MGP_CBAJ_G0026504.1 mouse_genomes_project 2 177260965 177265529 - Chd6 protein_coding retained_intron MGP_CBAJ_T0058627.1 MGP_CBAJ_G0026504.1 mouse_genomes_project 2 177263667 177402747 - MGP_CBAJ_P0058627 Chd6 protein_coding protein_coding MGP_CBAJ_T0058628.1 MGP_CBAJ_G0026504.1 mouse_genomes_project 2 177271943 177290594 - Chd6 protein_coding retained_intron MGP_CBAJ_T0058629.1 MGP_CBAJ_G0026504.1 mouse_genomes_project 2 177290134 177402800 - Chd6 protein_coding retained_intron MGP_CBAJ_T0058630.1 MGP_CBAJ_G0026504.1 mouse_genomes_project 2 177296192 177300350 - Chd6 protein_coding processed_transcript MGP_CBAJ_T0058631.1 MGP_CBAJ_G0026504.1 mouse_genomes_project 2 177307978 177311641 - Chd6 protein_coding processed_transcript MGP_CBAJ_T0058632.1 MGP_CBAJ_G0026504.1 mouse_genomes_project 2 177311931 177339072 - MGP_CBAJ_P0058632 Chd6 protein_coding protein_coding MGP_CBAJ_T0058633.1 MGP_CBAJ_G0026504.1 mouse_genomes_project 2 177319615 177402729 - Chd6 protein_coding retained_intron MGP_CBAJ_T0011399.1 MGP_CBAJ_G0009537.1 mouse_genomes_project 2 192757670 192757795 + Gm27849 misc_RNA misc_RNA MGP_CBAJ_T0057664.1 MGP_CBAJ_G0026284.1 mouse_genomes_project 2 158487587 158492313 + MGP_CBAJ_P0057664 Pet117 protein_coding protein_coding MGP_CBAJ_T0054111.1 MGP_CBAJ_G0025374.1 mouse_genomes_project 2 37196498 37254788 + MGP_CBAJ_P0054111 Mrrf protein_coding protein_coding MGP_CBAJ_T0054112.1 MGP_CBAJ_G0025374.1 mouse_genomes_project 2 37196507 37198926 + Mrrf protein_coding retained_intron MGP_CBAJ_T0054113.1 MGP_CBAJ_G0025374.1 mouse_genomes_project 2 37196743 37210233 + MGP_CBAJ_P0054113 Mrrf protein_coding nonsense_mediated_decay MGP_CBAJ_T0054114.1 MGP_CBAJ_G0025374.1 mouse_genomes_project 2 37209416 37221976 + Mrrf protein_coding processed_transcript MGP_CBAJ_T0053660.1 MGP_CBAJ_G0025307.1 mouse_genomes_project 2 32566303 32616217 - MGP_CBAJ_P0053660 Fam78a protein_coding nonsense_mediated_decay MGP_CBAJ_T0053663.1 MGP_CBAJ_G0025307.1 mouse_genomes_project 2 32591719 32615330 - MGP_CBAJ_P0053663 Fam78a protein_coding protein_coding MGP_CBAJ_T0053664.1 MGP_CBAJ_G0025307.1 mouse_genomes_project 2 32594272 32610899 - Fam78a protein_coding processed_transcript MGP_CBAJ_T0053665.1 MGP_CBAJ_G0025307.1 mouse_genomes_project 2 32614818 32616405 - Fam78a protein_coding processed_transcript MGP_CBAJ_T0055567.1 MGP_CBAJ_G0025815.1 mouse_genomes_project 2 97595614 97599619 + MGP_CBAJ_P0055567 Olfr1260 protein_coding protein_coding MGP_CBAJ_T0055568.1 MGP_CBAJ_G0025815.1 mouse_genomes_project 2 97595621 97599099 + Olfr1260 protein_coding processed_transcript MGP_CBAJ_T0055569.1 MGP_CBAJ_G0025815.1 mouse_genomes_project 2 97595624 97599049 + MGP_CBAJ_P0055569 Olfr1260 protein_coding protein_coding MGP_CBAJ_T0055570.1 MGP_CBAJ_G0025815.1 mouse_genomes_project 2 97595630 97599106 + Olfr1260 protein_coding processed_transcript MGP_CBAJ_T0055571.1 MGP_CBAJ_G0025815.1 mouse_genomes_project 2 97598686 97599619 + MGP_CBAJ_P0055571 Olfr1260 protein_coding protein_coding MGP_CBAJ_T0101836.1 MGP_CBAJ_G0039867.1 mouse_genomes_project 2 192194686 192270184 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013430.1 MGP_CBAJ_G0011542.1 mouse_genomes_project 2 82921828 82922261 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0059247.1 MGP_CBAJ_G0026662.1 mouse_genomes_project 2 192907755 192919222 - MGP_CBAJ_P0059247 Ctsz protein_coding protein_coding MGP_CBAJ_T0056939.1 MGP_CBAJ_G0026115.1 mouse_genomes_project 2 134326745 134346012 - MGP_CBAJ_P0056939 Gatm protein_coding protein_coding MGP_CBAJ_T0056940.1 MGP_CBAJ_G0026115.1 mouse_genomes_project 2 134330383 134333405 - Gatm protein_coding processed_transcript MGP_CBAJ_T0056941.1 MGP_CBAJ_G0026115.1 mouse_genomes_project 2 134330500 134333683 - Gatm protein_coding retained_intron MGP_CBAJ_T0013572.1 MGP_CBAJ_G0011684.1 mouse_genomes_project 2 141964393 141964494 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0058421.1 MGP_CBAJ_G0026462.1 mouse_genomes_project 2 172493287 172506141 + MGP_CBAJ_P0058421 Myl9 protein_coding protein_coding MGP_CBAJ_T0058422.1 MGP_CBAJ_G0026462.1 mouse_genomes_project 2 172493321 172505844 + Myl9 protein_coding processed_transcript MGP_CBAJ_T0058423.1 MGP_CBAJ_G0026462.1 mouse_genomes_project 2 172493324 172505017 + Myl9 protein_coding processed_transcript MGP_CBAJ_T0058424.1 MGP_CBAJ_G0026462.1 mouse_genomes_project 2 172502999 172505647 + Myl9 protein_coding processed_transcript MGP_CBAJ_T0098309.1 MGP_CBAJ_G0036576.1 mouse_genomes_project 2 4441066 4442294 - Gm10115 sense_intronic sense_intronic MGP_CBAJ_T0056331.1 MGP_CBAJ_G0025991.1 mouse_genomes_project 2 123774698 123789259 + MGP_CBAJ_P0056331 Tmco5b protein_coding protein_coding MGP_CBAJ_T0057591.1 MGP_CBAJ_G0026264.1 mouse_genomes_project 2 153307990 153396779 + MGP_CBAJ_P0057591 Ism1 protein_coding protein_coding MGP_CBAJ_T0057592.1 MGP_CBAJ_G0026264.1 mouse_genomes_project 2 153307990 153396780 + MGP_CBAJ_P0057592 Ism1 protein_coding protein_coding MGP_CBAJ_T0010344.1 MGP_CBAJ_G0008482.1 mouse_genomes_project 2 167987549 167987609 + Mir5622 miRNA miRNA MGP_CBAJ_T0007319.1 MGP_CBAJ_G0005995.1 mouse_genomes_project 2 187898703 187908139 - A630075F10Rik lincRNA lincRNA MGP_CBAJ_T0013681.1 MGP_CBAJ_G0011793.1 mouse_genomes_project 2 184240706 184242673 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055303.1 MGP_CBAJ_G0025620.1 mouse_genomes_project 2 91230951 91232438 - MGP_CBAJ_P0055303 Gm19426 protein_coding protein_coding MGP_CBAJ_T0017656.1 MGP_CBAJ_G0015231.1 mouse_genomes_project 2 177869929 177870252 - Gm29229 processed_transcript processed_transcript MGP_CBAJ_T0059034.1 MGP_CBAJ_G0026607.1 mouse_genomes_project 2 184729053 184805982 + MGP_CBAJ_P0059034 Slc9a8 protein_coding protein_coding MGP_CBAJ_T0059035.1 MGP_CBAJ_G0026607.1 mouse_genomes_project 2 184729062 184803618 + MGP_CBAJ_P0059035 Slc9a8 protein_coding protein_coding MGP_CBAJ_T0059036.1 MGP_CBAJ_G0026607.1 mouse_genomes_project 2 184729062 184805980 + MGP_CBAJ_P0059036 Slc9a8 protein_coding protein_coding MGP_CBAJ_T0059037.1 MGP_CBAJ_G0026607.1 mouse_genomes_project 2 184729064 184733476 + Slc9a8 protein_coding retained_intron MGP_CBAJ_T0059038.1 MGP_CBAJ_G0026607.1 mouse_genomes_project 2 184729071 184765678 + Slc9a8 protein_coding retained_intron MGP_CBAJ_T0059039.1 MGP_CBAJ_G0026607.1 mouse_genomes_project 2 184729073 184805981 + Slc9a8 protein_coding processed_transcript MGP_CBAJ_T0059040.1 MGP_CBAJ_G0026607.1 mouse_genomes_project 2 184729078 184752692 + Slc9a8 protein_coding retained_intron MGP_CBAJ_T0059041.1 MGP_CBAJ_G0026607.1 mouse_genomes_project 2 184729079 184795200 + Slc9a8 protein_coding processed_transcript MGP_CBAJ_T0059042.1 MGP_CBAJ_G0026607.1 mouse_genomes_project 2 184729083 184805981 + Slc9a8 protein_coding processed_transcript MGP_CBAJ_T0059043.1 MGP_CBAJ_G0026607.1 mouse_genomes_project 2 184731460 184795227 + Slc9a8 protein_coding processed_transcript MGP_CBAJ_T0059044.1 MGP_CBAJ_G0026607.1 mouse_genomes_project 2 184769693 184795225 + Slc9a8 protein_coding processed_transcript MGP_CBAJ_T0059045.1 MGP_CBAJ_G0026607.1 mouse_genomes_project 2 184769782 184796577 + Slc9a8 protein_coding processed_transcript MGP_CBAJ_T0059046.1 MGP_CBAJ_G0026607.1 mouse_genomes_project 2 184769882 184805981 + Slc9a8 protein_coding processed_transcript MGP_CBAJ_T0059139.1 MGP_CBAJ_G0026629.1 mouse_genomes_project 2 188247762 188340166 - MGP_CBAJ_P0059139 Bcas1 protein_coding protein_coding MGP_CBAJ_T0059140.1 MGP_CBAJ_G0026629.1 mouse_genomes_project 2 188247915 188340166 - MGP_CBAJ_P0059140 Bcas1 protein_coding protein_coding MGP_CBAJ_T0059141.1 MGP_CBAJ_G0026629.1 mouse_genomes_project 2 188248702 188250512 - Bcas1 protein_coding processed_transcript MGP_CBAJ_T0059142.1 MGP_CBAJ_G0026629.1 mouse_genomes_project 2 188248716 188257886 - Bcas1 protein_coding processed_transcript MGP_CBAJ_T0059143.1 MGP_CBAJ_G0026629.1 mouse_genomes_project 2 188248845 188333000 - MGP_CBAJ_P0059143 Bcas1 protein_coding protein_coding MGP_CBAJ_T0059144.1 MGP_CBAJ_G0026629.1 mouse_genomes_project 2 188248860 188250567 - Bcas1 protein_coding processed_transcript MGP_CBAJ_T0059145.1 MGP_CBAJ_G0026629.1 mouse_genomes_project 2 188295802 188296835 - Bcas1 protein_coding processed_transcript MGP_CBAJ_T0059146.1 MGP_CBAJ_G0026629.1 mouse_genomes_project 2 188307089 188340166 - Bcas1 protein_coding processed_transcript MGP_CBAJ_T0058565.1 MGP_CBAJ_G0026491.1 mouse_genomes_project 2 174611504 174616486 + MGP_CBAJ_P0058565 Slc32a1 protein_coding protein_coding MGP_CBAJ_T0011365.1 MGP_CBAJ_G0009503.1 mouse_genomes_project 2 34599689 34600059 + Nron misc_RNA misc_RNA MGP_CBAJ_T0003899.1 MGP_CBAJ_G0003477.1 mouse_genomes_project 2 61658992 61668253 + antisense antisense MGP_CBAJ_T0003900.1 MGP_CBAJ_G0003477.1 mouse_genomes_project 2 61660942 61667527 + antisense antisense MGP_CBAJ_T0098013.1 MGP_CBAJ_G0036286.1 mouse_genomes_project 2 65675321 65675438 + Gm25966 rRNA rRNA MGP_CBAJ_T0010242.1 MGP_CBAJ_G0008380.1 mouse_genomes_project 2 8397095 8397194 + Mir297a-3 miRNA miRNA MGP_CBAJ_T0059508.1 MGP_CBAJ_G0026719.1 mouse_genomes_project 2 200542375 200560325 + MGP_CBAJ_P0059508 Tpd52l2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059509.1 MGP_CBAJ_G0026719.1 mouse_genomes_project 2 200542397 200553497 + Tpd52l2 protein_coding processed_transcript MGP_CBAJ_T0059510.1 MGP_CBAJ_G0026719.1 mouse_genomes_project 2 200542398 200563176 + MGP_CBAJ_P0059510 Tpd52l2 protein_coding protein_coding MGP_CBAJ_T0059511.1 MGP_CBAJ_G0026719.1 mouse_genomes_project 2 200542414 200562581 + MGP_CBAJ_P0059511 Tpd52l2 protein_coding protein_coding MGP_CBAJ_T0059512.1 MGP_CBAJ_G0026719.1 mouse_genomes_project 2 200542416 200560336 + MGP_CBAJ_P0059512 Tpd52l2 protein_coding protein_coding MGP_CBAJ_T0059513.1 MGP_CBAJ_G0026719.1 mouse_genomes_project 2 200542420 200563172 + MGP_CBAJ_P0059513 Tpd52l2 protein_coding protein_coding MGP_CBAJ_T0059514.1 MGP_CBAJ_G0026719.1 mouse_genomes_project 2 200542432 200561466 + MGP_CBAJ_P0059514 Tpd52l2 protein_coding protein_coding MGP_CBAJ_T0059515.1 MGP_CBAJ_G0026719.1 mouse_genomes_project 2 200542462 200547786 + Tpd52l2 protein_coding retained_intron MGP_CBAJ_T0059516.1 MGP_CBAJ_G0026719.1 mouse_genomes_project 2 200542464 200560597 + MGP_CBAJ_P0059516 Tpd52l2 protein_coding protein_coding MGP_CBAJ_T0059517.1 MGP_CBAJ_G0026719.1 mouse_genomes_project 2 200545078 200558266 + MGP_CBAJ_P0059517 Tpd52l2 protein_coding protein_coding MGP_CBAJ_T0059518.1 MGP_CBAJ_G0026719.1 mouse_genomes_project 2 200545099 200548382 + Tpd52l2 protein_coding retained_intron MGP_CBAJ_T0059519.1 MGP_CBAJ_G0026719.1 mouse_genomes_project 2 200557787 200560543 + Tpd52l2 protein_coding retained_intron MGP_CBAJ_T0057232.1 MGP_CBAJ_G0026186.1 mouse_genomes_project 2 141897914 141912792 - MGP_CBAJ_P0057232 Il1a protein_coding protein_coding MGP_CBAJ_T0052622.1 MGP_CBAJ_G0025130.1 mouse_genomes_project 2 24469906 24478429 + MGP_CBAJ_P0052622 Nsmf protein_coding protein_coding MGP_CBAJ_T0052623.1 MGP_CBAJ_G0025130.1 mouse_genomes_project 2 24469924 24476110 + MGP_CBAJ_P0052623 Nsmf protein_coding protein_coding MGP_CBAJ_T0052624.1 MGP_CBAJ_G0025130.1 mouse_genomes_project 2 24469930 24478428 + MGP_CBAJ_P0052624 Nsmf protein_coding protein_coding MGP_CBAJ_T0052625.1 MGP_CBAJ_G0025130.1 mouse_genomes_project 2 24469935 24478429 + MGP_CBAJ_P0052625 Nsmf protein_coding protein_coding MGP_CBAJ_T0052626.1 MGP_CBAJ_G0025130.1 mouse_genomes_project 2 24469954 24472427 + Nsmf protein_coding retained_intron MGP_CBAJ_T0052627.1 MGP_CBAJ_G0025130.1 mouse_genomes_project 2 24469958 24470648 + Nsmf protein_coding retained_intron MGP_CBAJ_T0052628.1 MGP_CBAJ_G0025130.1 mouse_genomes_project 2 24469964 24478429 + MGP_CBAJ_P0052628 Nsmf protein_coding protein_coding MGP_CBAJ_T0052629.1 MGP_CBAJ_G0025130.1 mouse_genomes_project 2 24469964 24478429 + MGP_CBAJ_P0052629 Nsmf protein_coding protein_coding MGP_CBAJ_T0052630.1 MGP_CBAJ_G0025130.1 mouse_genomes_project 2 24469976 24474604 + MGP_CBAJ_P0052630 Nsmf protein_coding protein_coding MGP_CBAJ_T0052631.1 MGP_CBAJ_G0025130.1 mouse_genomes_project 2 24469986 24478429 + MGP_CBAJ_P0052631 Nsmf protein_coding protein_coding MGP_CBAJ_T0052632.1 MGP_CBAJ_G0025130.1 mouse_genomes_project 2 24470007 24478429 + MGP_CBAJ_P0052632 Nsmf protein_coding protein_coding MGP_CBAJ_T0052633.1 MGP_CBAJ_G0025130.1 mouse_genomes_project 2 24470019 24478429 + MGP_CBAJ_P0052633 Nsmf protein_coding protein_coding MGP_CBAJ_T0052634.1 MGP_CBAJ_G0025130.1 mouse_genomes_project 2 24470019 24478176 + MGP_CBAJ_P0052634 Nsmf protein_coding nonsense_mediated_decay MGP_CBAJ_T0052635.1 MGP_CBAJ_G0025130.1 mouse_genomes_project 2 24471431 24472895 + Nsmf protein_coding retained_intron MGP_CBAJ_T0052636.1 MGP_CBAJ_G0025130.1 mouse_genomes_project 2 24472694 24478429 + MGP_CBAJ_P0052636 Nsmf protein_coding protein_coding MGP_CBAJ_T0052637.1 MGP_CBAJ_G0025130.1 mouse_genomes_project 2 24473123 24475207 + Nsmf protein_coding retained_intron MGP_CBAJ_T0052638.1 MGP_CBAJ_G0025130.1 mouse_genomes_project 2 24475683 24476655 + Nsmf protein_coding retained_intron MGP_CBAJ_T0052639.1 MGP_CBAJ_G0025130.1 mouse_genomes_project 2 24476376 24477257 + Nsmf protein_coding retained_intron MGP_CBAJ_T0017512.1 MGP_CBAJ_G0015157.1 mouse_genomes_project 2 37266495 37268404 + Gm13429 processed_transcript processed_transcript MGP_CBAJ_T0017513.1 MGP_CBAJ_G0015157.1 mouse_genomes_project 2 37266966 37277038 + Gm13429 processed_transcript processed_transcript MGP_CBAJ_T0017514.1 MGP_CBAJ_G0015157.1 mouse_genomes_project 2 37274906 37277037 + Gm13429 processed_transcript processed_transcript MGP_CBAJ_T0013670.1 MGP_CBAJ_G0011782.1 mouse_genomes_project 2 177622788 177623245 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0058926.1 MGP_CBAJ_G0026588.1 mouse_genomes_project 2 182296029 182305807 - MGP_CBAJ_P0058926 Ocstamp protein_coding protein_coding MGP_CBAJ_T0057931.1 MGP_CBAJ_G0026356.1 mouse_genomes_project 2 167449610 167480257 + MGP_CBAJ_P0057931 6820408C15Rik protein_coding protein_coding MGP_CBAJ_T0057932.1 MGP_CBAJ_G0026356.1 mouse_genomes_project 2 167463566 167480256 + MGP_CBAJ_P0057932 6820408C15Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0057933.1 MGP_CBAJ_G0026356.1 mouse_genomes_project 2 167463593 167475570 + MGP_CBAJ_P0057933 6820408C15Rik protein_coding protein_coding MGP_CBAJ_T0058796.1 MGP_CBAJ_G0026560.1 mouse_genomes_project 2 181427612 181444274 - MGP_CBAJ_P0058796 Wfdc11 protein_coding protein_coding MGP_CBAJ_T0058797.1 MGP_CBAJ_G0026560.1 mouse_genomes_project 2 181427755 181430337 - MGP_CBAJ_P0058797 Wfdc11 protein_coding protein_coding MGP_CBAJ_T0059272.1 MGP_CBAJ_G0026671.1 mouse_genomes_project 2 197091529 197111925 + MGP_CBAJ_P0059272 Fam217b protein_coding protein_coding MGP_CBAJ_T0059273.1 MGP_CBAJ_G0026671.1 mouse_genomes_project 2 197091587 197099866 + Fam217b protein_coding processed_transcript MGP_CBAJ_T0056140.1 MGP_CBAJ_G0025918.1 mouse_genomes_project 2 114129560 114132016 - MGP_CBAJ_P0056140 Pin1rt1 protein_coding protein_coding MGP_CBAJ_T0004033.1 MGP_CBAJ_G0003566.1 mouse_genomes_project 2 156869306 156869914 + Kif16bos antisense antisense MGP_CBAJ_T0054260.1 MGP_CBAJ_G0025424.1 mouse_genomes_project 2 40520290 40554945 - MGP_CBAJ_P0054260 Ppp6c protein_coding protein_coding MGP_CBAJ_T0054261.1 MGP_CBAJ_G0025424.1 mouse_genomes_project 2 40522670 40554776 - MGP_CBAJ_P0054261 Ppp6c protein_coding nonsense_mediated_decay MGP_CBAJ_T0054262.1 MGP_CBAJ_G0025424.1 mouse_genomes_project 2 40522713 40554814 - MGP_CBAJ_P0054262 Ppp6c protein_coding protein_coding MGP_CBAJ_T0054263.1 MGP_CBAJ_G0025424.1 mouse_genomes_project 2 40523433 40526927 - Ppp6c protein_coding processed_transcript MGP_CBAJ_T0013658.1 MGP_CBAJ_G0011770.1 mouse_genomes_project 2 172570280 172582036 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0055381.1 MGP_CBAJ_G0025657.1 mouse_genomes_project 2 92561148 92562072 + MGP_CBAJ_P0055381 Olfr1026 protein_coding protein_coding MGP_CBAJ_T0013273.1 MGP_CBAJ_G0011385.1 mouse_genomes_project 2 18662184 18663537 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0056252.1 MGP_CBAJ_G0025943.1 mouse_genomes_project 2 120396312 120398579 - MGP_CBAJ_P0056252 Fibin protein_coding protein_coding MGP_CBAJ_T0010235.1 MGP_CBAJ_G0008373.1 mouse_genomes_project 2 8389206 8389302 + Mir466d miRNA miRNA MGP_CBAJ_T0055575.1 MGP_CBAJ_G0025819.1 mouse_genomes_project 2 97642887 97643814 - MGP_CBAJ_P0055575 Olfr1264 protein_coding protein_coding MGP_CBAJ_T0003868.1 MGP_CBAJ_G0003451.1 mouse_genomes_project 2 31075366 31082078 + antisense antisense MGP_CBAJ_T0099140.1 MGP_CBAJ_G0037395.1 mouse_genomes_project 2 173623566 173623665 + Gm23463 snRNA snRNA MGP_CBAJ_T0056574.1 MGP_CBAJ_G0026050.1 mouse_genomes_project 2 131177627 131266074 + MGP_CBAJ_P0056574 Mga protein_coding protein_coding MGP_CBAJ_T0056575.1 MGP_CBAJ_G0026050.1 mouse_genomes_project 2 131177627 131262489 + MGP_CBAJ_P0056575 Mga protein_coding protein_coding MGP_CBAJ_T0056576.1 MGP_CBAJ_G0026050.1 mouse_genomes_project 2 131177627 131266074 + MGP_CBAJ_P0056576 Mga protein_coding protein_coding MGP_CBAJ_T0056577.1 MGP_CBAJ_G0026050.1 mouse_genomes_project 2 131177627 131266074 + MGP_CBAJ_P0056577 Mga protein_coding protein_coding MGP_CBAJ_T0056578.1 MGP_CBAJ_G0026050.1 mouse_genomes_project 2 131177631 131199946 + Mga protein_coding retained_intron MGP_CBAJ_T0056579.1 MGP_CBAJ_G0026050.1 mouse_genomes_project 2 131177647 131213362 + Mga protein_coding processed_transcript MGP_CBAJ_T0056580.1 MGP_CBAJ_G0026050.1 mouse_genomes_project 2 131177704 131255567 + MGP_CBAJ_P0056580 Mga protein_coding protein_coding MGP_CBAJ_T0056581.1 MGP_CBAJ_G0026050.1 mouse_genomes_project 2 131178059 131259697 + MGP_CBAJ_P0056581 Mga protein_coding unknown_likely_coding MGP_CBAJ_T0056582.1 MGP_CBAJ_G0026050.1 mouse_genomes_project 2 131203635 131210759 + Mga protein_coding retained_intron MGP_CBAJ_T0056583.1 MGP_CBAJ_G0026050.1 mouse_genomes_project 2 131221841 131227375 + Mga protein_coding processed_transcript MGP_CBAJ_T0056584.1 MGP_CBAJ_G0026050.1 mouse_genomes_project 2 131222010 131235098 + Mga protein_coding processed_transcript MGP_CBAJ_T0056585.1 MGP_CBAJ_G0026050.1 mouse_genomes_project 2 131222105 131230182 + Mga protein_coding processed_transcript MGP_CBAJ_T0056586.1 MGP_CBAJ_G0026050.1 mouse_genomes_project 2 131229891 131237720 + Mga protein_coding processed_transcript MGP_CBAJ_T0056587.1 MGP_CBAJ_G0026050.1 mouse_genomes_project 2 131230395 131237513 + Mga protein_coding processed_transcript MGP_CBAJ_T0056588.1 MGP_CBAJ_G0026050.1 mouse_genomes_project 2 131253091 131260097 + Mga protein_coding processed_transcript MGP_CBAJ_T0056589.1 MGP_CBAJ_G0026050.1 mouse_genomes_project 2 131255177 131256995 + Mga protein_coding retained_intron MGP_CBAJ_T0053793.1 MGP_CBAJ_G0025326.1 mouse_genomes_project 2 33235304 33257551 + MGP_CBAJ_P0053793 St6galnac6 protein_coding protein_coding MGP_CBAJ_T0053794.1 MGP_CBAJ_G0025326.1 mouse_genomes_project 2 33235321 33256604 + MGP_CBAJ_P0053794 St6galnac6 protein_coding protein_coding MGP_CBAJ_T0053795.1 MGP_CBAJ_G0025326.1 mouse_genomes_project 2 33242548 33258826 + MGP_CBAJ_P0053795 St6galnac6 protein_coding protein_coding MGP_CBAJ_T0053796.1 MGP_CBAJ_G0025326.1 mouse_genomes_project 2 33242598 33258826 + MGP_CBAJ_P0053796 St6galnac6 protein_coding protein_coding MGP_CBAJ_T0053797.1 MGP_CBAJ_G0025326.1 mouse_genomes_project 2 33242613 33258828 + MGP_CBAJ_P0053797 St6galnac6 protein_coding protein_coding MGP_CBAJ_T0053798.1 MGP_CBAJ_G0025326.1 mouse_genomes_project 2 33242627 33258828 + MGP_CBAJ_P0053798 St6galnac6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0053799.1 MGP_CBAJ_G0025326.1 mouse_genomes_project 2 33242630 33253030 + MGP_CBAJ_P0053799 St6galnac6 protein_coding protein_coding MGP_CBAJ_T0053800.1 MGP_CBAJ_G0025326.1 mouse_genomes_project 2 33243658 33258826 + MGP_CBAJ_P0053800 St6galnac6 protein_coding protein_coding MGP_CBAJ_T0053801.1 MGP_CBAJ_G0025326.1 mouse_genomes_project 2 33243672 33254841 + St6galnac6 protein_coding retained_intron MGP_CBAJ_T0053802.1 MGP_CBAJ_G0025326.1 mouse_genomes_project 2 33244051 33258826 + MGP_CBAJ_P0053802 St6galnac6 protein_coding protein_coding MGP_CBAJ_T0053803.1 MGP_CBAJ_G0025326.1 mouse_genomes_project 2 33244304 33247915 + MGP_CBAJ_P0053803 St6galnac6 protein_coding protein_coding MGP_CBAJ_T0053804.1 MGP_CBAJ_G0025326.1 mouse_genomes_project 2 33244600 33252951 + MGP_CBAJ_P0053804 St6galnac6 protein_coding protein_coding MGP_CBAJ_T0053805.1 MGP_CBAJ_G0025326.1 mouse_genomes_project 2 33244630 33252971 + MGP_CBAJ_P0053805 St6galnac6 protein_coding protein_coding MGP_CBAJ_T0054396.1 MGP_CBAJ_G0025443.1 mouse_genomes_project 2 54867406 54891183 + MGP_CBAJ_P0054396 Tnfaip6 protein_coding protein_coding MGP_CBAJ_T0099137.1 MGP_CBAJ_G0037392.1 mouse_genomes_project 2 162358858 162358965 - Gm25516 snRNA snRNA MGP_CBAJ_T0055279.1 MGP_CBAJ_G0025614.1 mouse_genomes_project 2 91144619 91146175 - MGP_CBAJ_P0055279 2700094K13Rik protein_coding protein_coding MGP_CBAJ_T0055280.1 MGP_CBAJ_G0025614.1 mouse_genomes_project 2 91144625 91146113 - MGP_CBAJ_P0055280 2700094K13Rik protein_coding protein_coding MGP_CBAJ_T0055281.1 MGP_CBAJ_G0025614.1 mouse_genomes_project 2 91144711 91146081 - MGP_CBAJ_P0055281 2700094K13Rik protein_coding protein_coding MGP_CBAJ_T0055282.1 MGP_CBAJ_G0025614.1 mouse_genomes_project 2 91145099 91146102 - MGP_CBAJ_P0055282 2700094K13Rik protein_coding protein_coding MGP_CBAJ_T0055283.1 MGP_CBAJ_G0025614.1 mouse_genomes_project 2 91145354 91146081 - 2700094K13Rik protein_coding retained_intron MGP_CBAJ_T0055284.1 MGP_CBAJ_G0025614.1 mouse_genomes_project 2 91145421 91146059 - MGP_CBAJ_P0055284 2700094K13Rik protein_coding protein_coding MGP_CBAJ_T0057159.1 MGP_CBAJ_G0026166.1 mouse_genomes_project 2 140155296 140207274 - MGP_CBAJ_P0057159 Nphp1 protein_coding protein_coding MGP_CBAJ_T0057160.1 MGP_CBAJ_G0026166.1 mouse_genomes_project 2 140155298 140159229 - Nphp1 protein_coding processed_transcript MGP_CBAJ_T0057161.1 MGP_CBAJ_G0026166.1 mouse_genomes_project 2 140155300 140207317 - MGP_CBAJ_P0057161 Nphp1 protein_coding protein_coding MGP_CBAJ_T0057162.1 MGP_CBAJ_G0026166.1 mouse_genomes_project 2 140160310 140170478 - Nphp1 protein_coding retained_intron MGP_CBAJ_T0058925.1 MGP_CBAJ_G0026587.1 mouse_genomes_project 2 182274527 182288477 - MGP_CBAJ_P0058925 Zfp334 protein_coding protein_coding MGP_CBAJ_T0054468.1 MGP_CBAJ_G0025458.1 mouse_genomes_project 2 61523998 61535667 - MGP_CBAJ_P0054468 Ermn protein_coding protein_coding MGP_CBAJ_T0013686.1 MGP_CBAJ_G0011798.1 mouse_genomes_project 2 184957669 184958145 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003921.1 MGP_CBAJ_G0003494.1 mouse_genomes_project 2 74654175 74657077 + Mettl5os antisense antisense MGP_CBAJ_T0056365.1 MGP_CBAJ_G0026001.1 mouse_genomes_project 2 126339271 126552271 + MGP_CBAJ_P0056365 BC052040 protein_coding protein_coding MGP_CBAJ_T0056366.1 MGP_CBAJ_G0026001.1 mouse_genomes_project 2 126339288 126552271 + MGP_CBAJ_P0056366 BC052040 protein_coding protein_coding MGP_CBAJ_T0056367.1 MGP_CBAJ_G0026001.1 mouse_genomes_project 2 126339356 126403259 + BC052040 protein_coding processed_transcript MGP_CBAJ_T0007158.1 MGP_CBAJ_G0005866.1 mouse_genomes_project 2 100030054 100034436 - 2900072N19Rik lincRNA lincRNA MGP_CBAJ_T0010290.1 MGP_CBAJ_G0008428.1 mouse_genomes_project 2 60093426 60093523 + Mir195b miRNA miRNA MGP_CBAJ_T0007267.1 MGP_CBAJ_G0005951.1 mouse_genomes_project 2 172105233 172107830 - Gm14225 lincRNA lincRNA MGP_CBAJ_T0053097.1 MGP_CBAJ_G0025217.1 mouse_genomes_project 2 26693434 26718407 + MGP_CBAJ_P0053097 Adamts13 protein_coding protein_coding MGP_CBAJ_T0053098.1 MGP_CBAJ_G0025217.1 mouse_genomes_project 2 26693511 26723718 + MGP_CBAJ_P0053098 Adamts13 protein_coding protein_coding MGP_CBAJ_T0053099.1 MGP_CBAJ_G0025217.1 mouse_genomes_project 2 26720761 26723535 + Adamts13 protein_coding processed_transcript MGP_CBAJ_T0013462.1 MGP_CBAJ_G0011574.1 mouse_genomes_project 2 92432593 92432789 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0056391.1 MGP_CBAJ_G0026004.1 mouse_genomes_project 2 128047853 128116487 + MGP_CBAJ_P0056391 Spred1 protein_coding protein_coding MGP_CBAJ_T0056392.1 MGP_CBAJ_G0026004.1 mouse_genomes_project 2 128048117 128105561 + MGP_CBAJ_P0056392 Spred1 protein_coding protein_coding MGP_CBAJ_T0055810.1 MGP_CBAJ_G0025859.1 mouse_genomes_project 2 99884505 99927356 - MGP_CBAJ_P0055810 Dgkz protein_coding protein_coding MGP_CBAJ_T0055811.1 MGP_CBAJ_G0025859.1 mouse_genomes_project 2 99884505 99917094 - MGP_CBAJ_P0055811 Dgkz protein_coding nonsense_mediated_decay MGP_CBAJ_T0055812.1 MGP_CBAJ_G0025859.1 mouse_genomes_project 2 99884507 99915183 - MGP_CBAJ_P0055812 Dgkz protein_coding protein_coding MGP_CBAJ_T0055813.1 MGP_CBAJ_G0025859.1 mouse_genomes_project 2 99884508 99917107 - MGP_CBAJ_P0055813 Dgkz protein_coding nonsense_mediated_decay MGP_CBAJ_T0055814.1 MGP_CBAJ_G0025859.1 mouse_genomes_project 2 99884508 99902109 - MGP_CBAJ_P0055814 Dgkz protein_coding protein_coding MGP_CBAJ_T0055815.1 MGP_CBAJ_G0025859.1 mouse_genomes_project 2 99884917 99885614 - Dgkz protein_coding retained_intron MGP_CBAJ_T0055816.1 MGP_CBAJ_G0025859.1 mouse_genomes_project 2 99885065 99886263 - Dgkz protein_coding retained_intron MGP_CBAJ_T0055817.1 MGP_CBAJ_G0025859.1 mouse_genomes_project 2 99885123 99887181 - Dgkz protein_coding retained_intron MGP_CBAJ_T0055818.1 MGP_CBAJ_G0025859.1 mouse_genomes_project 2 99885136 99886193 - Dgkz protein_coding retained_intron MGP_CBAJ_T0055819.1 MGP_CBAJ_G0025859.1 mouse_genomes_project 2 99885462 99887282 - Dgkz protein_coding retained_intron MGP_CBAJ_T0055820.1 MGP_CBAJ_G0025859.1 mouse_genomes_project 2 99887588 99889710 - Dgkz protein_coding processed_transcript MGP_CBAJ_T0055821.1 MGP_CBAJ_G0025859.1 mouse_genomes_project 2 99892439 99901993 - MGP_CBAJ_P0055821 Dgkz protein_coding nonsense_mediated_decay MGP_CBAJ_T0055822.1 MGP_CBAJ_G0025859.1 mouse_genomes_project 2 99892690 99896939 - Dgkz protein_coding processed_transcript MGP_CBAJ_T0057341.1 MGP_CBAJ_G0026215.1 mouse_genomes_project 2 143455368 143618744 - MGP_CBAJ_P0057341 4930402H24Rik protein_coding protein_coding MGP_CBAJ_T0057342.1 MGP_CBAJ_G0026215.1 mouse_genomes_project 2 143459947 143475737 - MGP_CBAJ_P0057342 4930402H24Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0057343.1 MGP_CBAJ_G0026215.1 mouse_genomes_project 2 143461416 143482935 - MGP_CBAJ_P0057343 4930402H24Rik protein_coding protein_coding MGP_CBAJ_T0057344.1 MGP_CBAJ_G0026215.1 mouse_genomes_project 2 143501444 143504427 - 4930402H24Rik protein_coding retained_intron MGP_CBAJ_T0057345.1 MGP_CBAJ_G0026215.1 mouse_genomes_project 2 143503923 143523778 - 4930402H24Rik protein_coding processed_transcript MGP_CBAJ_T0057346.1 MGP_CBAJ_G0026215.1 mouse_genomes_project 2 143503934 143536983 - MGP_CBAJ_P0057346 4930402H24Rik protein_coding protein_coding MGP_CBAJ_T0057347.1 MGP_CBAJ_G0026215.1 mouse_genomes_project 2 143513381 143618830 - 4930402H24Rik protein_coding retained_intron MGP_CBAJ_T0057348.1 MGP_CBAJ_G0026215.1 mouse_genomes_project 2 143543468 143544545 - 4930402H24Rik protein_coding processed_transcript MGP_CBAJ_T0057349.1 MGP_CBAJ_G0026215.1 mouse_genomes_project 2 143543665 143581700 - 4930402H24Rik protein_coding processed_transcript MGP_CBAJ_T0057350.1 MGP_CBAJ_G0026215.1 mouse_genomes_project 2 143549557 143618809 - 4930402H24Rik protein_coding retained_intron MGP_CBAJ_T0057351.1 MGP_CBAJ_G0026215.1 mouse_genomes_project 2 143572708 143585103 - 4930402H24Rik protein_coding processed_transcript MGP_CBAJ_T0057352.1 MGP_CBAJ_G0026215.1 mouse_genomes_project 2 143574639 143618843 - MGP_CBAJ_P0057352 4930402H24Rik protein_coding protein_coding MGP_CBAJ_T0057353.1 MGP_CBAJ_G0026215.1 mouse_genomes_project 2 143581667 143618835 - MGP_CBAJ_P0057353 4930402H24Rik protein_coding protein_coding MGP_CBAJ_T0057354.1 MGP_CBAJ_G0026215.1 mouse_genomes_project 2 143581702 143618832 - MGP_CBAJ_P0057354 4930402H24Rik protein_coding protein_coding MGP_CBAJ_T0057355.1 MGP_CBAJ_G0026215.1 mouse_genomes_project 2 143583676 143697071 - MGP_CBAJ_P0057355 4930402H24Rik protein_coding protein_coding MGP_CBAJ_T0058500.1 MGP_CBAJ_G0026478.1 mouse_genomes_project 2 173427526 173429833 + MGP_CBAJ_P0058500 Nnat protein_coding protein_coding MGP_CBAJ_T0058501.1 MGP_CBAJ_G0026478.1 mouse_genomes_project 2 173427555 173429567 + MGP_CBAJ_P0058501 Nnat protein_coding protein_coding MGP_CBAJ_T0058502.1 MGP_CBAJ_G0026478.1 mouse_genomes_project 2 173427558 173429851 + MGP_CBAJ_P0058502 Nnat protein_coding protein_coding MGP_CBAJ_T0058503.1 MGP_CBAJ_G0026478.1 mouse_genomes_project 2 173427564 173429833 + MGP_CBAJ_P0058503 Nnat protein_coding protein_coding MGP_CBAJ_T0058504.1 MGP_CBAJ_G0026478.1 mouse_genomes_project 2 173427569 173429321 + MGP_CBAJ_P0058504 Nnat protein_coding protein_coding MGP_CBAJ_T0058505.1 MGP_CBAJ_G0026478.1 mouse_genomes_project 2 173427571 173428701 + MGP_CBAJ_P0058505 Nnat protein_coding protein_coding MGP_CBAJ_T0058506.1 MGP_CBAJ_G0026478.1 mouse_genomes_project 2 173427572 173429111 + MGP_CBAJ_P0058506 Nnat protein_coding protein_coding MGP_CBAJ_T0058507.1 MGP_CBAJ_G0026478.1 mouse_genomes_project 2 173427578 173429109 + MGP_CBAJ_P0058507 Nnat protein_coding protein_coding MGP_CBAJ_T0058508.1 MGP_CBAJ_G0026478.1 mouse_genomes_project 2 173427588 173429846 + Nnat protein_coding retained_intron MGP_CBAJ_T0058509.1 MGP_CBAJ_G0026478.1 mouse_genomes_project 2 173428337 173429184 + Nnat protein_coding retained_intron MGP_CBAJ_T0059261.1 MGP_CBAJ_G0026668.1 mouse_genomes_project 2 196773541 197003004 + MGP_CBAJ_P0059261 Phactr3 protein_coding protein_coding MGP_CBAJ_T0059262.1 MGP_CBAJ_G0026668.1 mouse_genomes_project 2 196773745 197001003 + MGP_CBAJ_P0059262 Phactr3 protein_coding protein_coding MGP_CBAJ_T0059263.1 MGP_CBAJ_G0026668.1 mouse_genomes_project 2 196800699 197001008 + MGP_CBAJ_P0059263 Phactr3 protein_coding protein_coding MGP_CBAJ_T0059264.1 MGP_CBAJ_G0026668.1 mouse_genomes_project 2 196833567 197001003 + MGP_CBAJ_P0059264 Phactr3 protein_coding protein_coding MGP_CBAJ_T0059265.1 MGP_CBAJ_G0026668.1 mouse_genomes_project 2 196992067 196996278 + Phactr3 protein_coding retained_intron MGP_CBAJ_T0059266.1 MGP_CBAJ_G0026668.1 mouse_genomes_project 2 196992303 196997342 + Phactr3 protein_coding retained_intron MGP_CBAJ_T0017651.1 MGP_CBAJ_G0015229.1 mouse_genomes_project 2 174590966 174611397 - Gm14204 processed_transcript processed_transcript MGP_CBAJ_T0017652.1 MGP_CBAJ_G0015229.1 mouse_genomes_project 2 174593663 174611461 - Gm14204 processed_transcript processed_transcript MGP_CBAJ_T0017653.1 MGP_CBAJ_G0015229.1 mouse_genomes_project 2 174601127 174611344 - Gm14204 processed_transcript processed_transcript MGP_CBAJ_T0017654.1 MGP_CBAJ_G0015229.1 mouse_genomes_project 2 174601266 174611328 - Gm14204 processed_transcript processed_transcript MGP_CBAJ_T0057164.1 MGP_CBAJ_G0026168.1 mouse_genomes_project 2 140212631 140251922 - MGP_CBAJ_P0057164 Bub1 protein_coding protein_coding MGP_CBAJ_T0057165.1 MGP_CBAJ_G0026168.1 mouse_genomes_project 2 140216014 140216777 - Bub1 protein_coding retained_intron MGP_CBAJ_T0057166.1 MGP_CBAJ_G0026168.1 mouse_genomes_project 2 140224620 140231964 - Bub1 protein_coding processed_transcript MGP_CBAJ_T0057167.1 MGP_CBAJ_G0026168.1 mouse_genomes_project 2 140228636 140233013 - Bub1 protein_coding processed_transcript MGP_CBAJ_T0057168.1 MGP_CBAJ_G0026168.1 mouse_genomes_project 2 140243678 140251861 - Bub1 protein_coding retained_intron MGP_CBAJ_T0052140.1 MGP_CBAJ_G0025050.1 mouse_genomes_project 2 7937013 7948240 + Kin protein_coding processed_transcript MGP_CBAJ_T0052141.1 MGP_CBAJ_G0025050.1 mouse_genomes_project 2 7937044 7949227 + MGP_CBAJ_P0052141 Kin protein_coding protein_coding MGP_CBAJ_T0052142.1 MGP_CBAJ_G0025050.1 mouse_genomes_project 2 7946717 7948600 + Kin protein_coding processed_transcript MGP_CBAJ_T0056199.1 MGP_CBAJ_G0025931.1 mouse_genomes_project 2 115553795 115593828 - Dnajc24 protein_coding processed_transcript MGP_CBAJ_T0056200.1 MGP_CBAJ_G0025931.1 mouse_genomes_project 2 115553975 115593798 - MGP_CBAJ_P0056200 Dnajc24 protein_coding protein_coding MGP_CBAJ_T0056201.1 MGP_CBAJ_G0025931.1 mouse_genomes_project 2 115554023 115593767 - Dnajc24 protein_coding processed_transcript MGP_CBAJ_T0056202.1 MGP_CBAJ_G0025931.1 mouse_genomes_project 2 115557449 115592643 - Dnajc24 protein_coding processed_transcript MGP_CBAJ_T0052340.1 MGP_CBAJ_G0025081.1 mouse_genomes_project 2 16022892 16459800 - MGP_CBAJ_P0052340 protein_coding protein_coding MGP_CBAJ_T0052341.1 MGP_CBAJ_G0025081.1 mouse_genomes_project 2 16023037 16152928 - MGP_CBAJ_P0052341 protein_coding protein_coding MGP_CBAJ_T0052342.1 MGP_CBAJ_G0025081.1 mouse_genomes_project 2 16027677 16039748 - protein_coding processed_transcript MGP_CBAJ_T0052343.1 MGP_CBAJ_G0025081.1 mouse_genomes_project 2 16027677 16152534 - MGP_CBAJ_P0052343 protein_coding unknown_likely_coding MGP_CBAJ_T0052344.1 MGP_CBAJ_G0025081.1 mouse_genomes_project 2 16029738 16228306 - MGP_CBAJ_P0052344 protein_coding protein_coding MGP_CBAJ_T0052345.1 MGP_CBAJ_G0025081.1 mouse_genomes_project 2 16053565 16075714 - protein_coding processed_transcript MGP_CBAJ_T0052346.1 MGP_CBAJ_G0025081.1 mouse_genomes_project 2 16055163 16075757 - protein_coding processed_transcript MGP_CBAJ_T0052347.1 MGP_CBAJ_G0025081.1 mouse_genomes_project 2 16055420 16075783 - MGP_CBAJ_P0052347 protein_coding protein_coding MGP_CBAJ_T0052348.1 MGP_CBAJ_G0025081.1 mouse_genomes_project 2 16058140 16075744 - protein_coding processed_transcript MGP_CBAJ_T0052349.1 MGP_CBAJ_G0025081.1 mouse_genomes_project 2 16077677 16154783 - MGP_CBAJ_P0052349 protein_coding protein_coding MGP_CBAJ_T0052350.1 MGP_CBAJ_G0025081.1 mouse_genomes_project 2 16077680 16154785 - MGP_CBAJ_P0052350 protein_coding protein_coding MGP_CBAJ_T0052351.1 MGP_CBAJ_G0025081.1 mouse_genomes_project 2 16081743 16152617 - MGP_CBAJ_P0052351 protein_coding protein_coding MGP_CBAJ_T0052352.1 MGP_CBAJ_G0025081.1 mouse_genomes_project 2 16124046 16226650 - protein_coding processed_transcript MGP_CBAJ_T0052353.1 MGP_CBAJ_G0025081.1 mouse_genomes_project 2 16456142 16460221 - protein_coding processed_transcript MGP_CBAJ_T0001051.1 MGP_CBAJ_G0000983.1 mouse_genomes_project 2 73619206 73622979 + TEC TEC MGP_CBAJ_T0003930.1 MGP_CBAJ_G0003499.1 mouse_genomes_project 2 77343103 77346742 - Rapgef4os3 antisense antisense MGP_CBAJ_T0056949.1 MGP_CBAJ_G0026118.1 mouse_genomes_project 2 134510825 134521848 + MGP_CBAJ_P0056949 Bloc1s6 protein_coding protein_coding MGP_CBAJ_T0056950.1 MGP_CBAJ_G0026118.1 mouse_genomes_project 2 134510835 134518352 + Bloc1s6 protein_coding processed_transcript MGP_CBAJ_T0056951.1 MGP_CBAJ_G0026118.1 mouse_genomes_project 2 134510841 134520471 + Bloc1s6 protein_coding processed_transcript MGP_CBAJ_T0056952.1 MGP_CBAJ_G0026118.1 mouse_genomes_project 2 134510849 134511479 + Bloc1s6 protein_coding processed_transcript MGP_CBAJ_T0056953.1 MGP_CBAJ_G0026118.1 mouse_genomes_project 2 134510852 134518418 + Bloc1s6 protein_coding processed_transcript MGP_CBAJ_T0056954.1 MGP_CBAJ_G0026118.1 mouse_genomes_project 2 134510881 134519378 + Bloc1s6 protein_coding processed_transcript MGP_CBAJ_T0001028.1 MGP_CBAJ_G0000960.1 mouse_genomes_project 2 34381554 34381833 + TEC TEC MGP_CBAJ_T0054364.1 MGP_CBAJ_G0025436.1 mouse_genomes_project 2 52337159 52512432 + MGP_CBAJ_P0054364 Lypd6b protein_coding protein_coding MGP_CBAJ_T0054365.1 MGP_CBAJ_G0025436.1 mouse_genomes_project 2 52337202 52491897 + Lypd6b protein_coding processed_transcript MGP_CBAJ_T0054366.1 MGP_CBAJ_G0025436.1 mouse_genomes_project 2 52393391 52503451 + Lypd6b protein_coding processed_transcript MGP_CBAJ_T0054367.1 MGP_CBAJ_G0025436.1 mouse_genomes_project 2 52491803 52512432 + MGP_CBAJ_P0054367 Lypd6b protein_coding unknown_likely_coding MGP_CBAJ_T0054121.1 MGP_CBAJ_G0025377.1 mouse_genomes_project 2 37493844 37494774 + MGP_CBAJ_P0054121 Olfr339 protein_coding protein_coding MGP_CBAJ_T0054140.1 MGP_CBAJ_G0025395.1 mouse_genomes_project 2 38088060 38088987 + MGP_CBAJ_P0054140 Olfr357 protein_coding protein_coding MGP_CBAJ_T0013322.1 MGP_CBAJ_G0011434.1 mouse_genomes_project 2 40025561 40026167 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0053750.1 MGP_CBAJ_G0025316.1 mouse_genomes_project 2 32965640 32970402 - MGP_CBAJ_P0053750 1110008P14Rik protein_coding protein_coding MGP_CBAJ_T0053751.1 MGP_CBAJ_G0025316.1 mouse_genomes_project 2 32967640 32970478 - MGP_CBAJ_P0053751 1110008P14Rik protein_coding protein_coding MGP_CBAJ_T0051949.1 MGP_CBAJ_G0025019.1 mouse_genomes_project 2 400775 414381 - MGP_CBAJ_P0051949 Meig1 protein_coding protein_coding MGP_CBAJ_T0051950.1 MGP_CBAJ_G0025019.1 mouse_genomes_project 2 400775 410752 - MGP_CBAJ_P0051950 Meig1 protein_coding protein_coding MGP_CBAJ_T0051951.1 MGP_CBAJ_G0025019.1 mouse_genomes_project 2 400778 410774 - MGP_CBAJ_P0051951 Meig1 protein_coding protein_coding MGP_CBAJ_T0051952.1 MGP_CBAJ_G0025019.1 mouse_genomes_project 2 400779 410862 - MGP_CBAJ_P0051952 Meig1 protein_coding protein_coding MGP_CBAJ_T0051953.1 MGP_CBAJ_G0025019.1 mouse_genomes_project 2 400842 410314 - MGP_CBAJ_P0051953 Meig1 protein_coding protein_coding MGP_CBAJ_T0051954.1 MGP_CBAJ_G0025019.1 mouse_genomes_project 2 400999 414327 - MGP_CBAJ_P0051954 Meig1 protein_coding protein_coding MGP_CBAJ_T0054358.1 MGP_CBAJ_G0025435.1 mouse_genomes_project 2 52154522 52324418 + MGP_CBAJ_P0054358 Kif5c protein_coding protein_coding MGP_CBAJ_T0054359.1 MGP_CBAJ_G0025435.1 mouse_genomes_project 2 52241528 52277158 + MGP_CBAJ_P0054359 Kif5c protein_coding protein_coding MGP_CBAJ_T0054360.1 MGP_CBAJ_G0025435.1 mouse_genomes_project 2 52269473 52282491 + Kif5c protein_coding processed_transcript MGP_CBAJ_T0054361.1 MGP_CBAJ_G0025435.1 mouse_genomes_project 2 52279517 52282482 + Kif5c protein_coding processed_transcript MGP_CBAJ_T0054362.1 MGP_CBAJ_G0025435.1 mouse_genomes_project 2 52291431 52304294 + Kif5c protein_coding processed_transcript MGP_CBAJ_T0054363.1 MGP_CBAJ_G0025435.1 mouse_genomes_project 2 52299096 52305815 + Kif5c protein_coding processed_transcript MGP_CBAJ_T0059257.1 MGP_CBAJ_G0026667.1 mouse_genomes_project 2 193285160 193308524 + MGP_CBAJ_P0059257 Edn3 protein_coding protein_coding MGP_CBAJ_T0059258.1 MGP_CBAJ_G0026667.1 mouse_genomes_project 2 193285340 193306462 + MGP_CBAJ_P0059258 Edn3 protein_coding protein_coding MGP_CBAJ_T0059259.1 MGP_CBAJ_G0026667.1 mouse_genomes_project 2 193285593 193307067 + Edn3 protein_coding retained_intron MGP_CBAJ_T0059260.1 MGP_CBAJ_G0026667.1 mouse_genomes_project 2 193294463 193307022 + Edn3 protein_coding processed_transcript MGP_CBAJ_T0056474.1 MGP_CBAJ_G0026024.1 mouse_genomes_project 2 130172581 130184732 - MGP_CBAJ_P0056474 Ccdc32 protein_coding protein_coding MGP_CBAJ_T0056475.1 MGP_CBAJ_G0026024.1 mouse_genomes_project 2 130176518 130184732 - MGP_CBAJ_P0056475 Ccdc32 protein_coding protein_coding MGP_CBAJ_T0056476.1 MGP_CBAJ_G0026024.1 mouse_genomes_project 2 130176589 130184716 - MGP_CBAJ_P0056476 Ccdc32 protein_coding protein_coding MGP_CBAJ_T0055429.1 MGP_CBAJ_G0025704.1 mouse_genomes_project 2 94050322 94051261 - MGP_CBAJ_P0055429 Olfr259 protein_coding protein_coding MGP_CBAJ_T0013458.1 MGP_CBAJ_G0011570.1 mouse_genomes_project 2 90157573 90158826 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0056539.1 MGP_CBAJ_G0026043.1 mouse_genomes_project 2 130862334 130898706 + MGP_CBAJ_P0056539 Nusap1 protein_coding protein_coding MGP_CBAJ_T0056540.1 MGP_CBAJ_G0026043.1 mouse_genomes_project 2 130862730 130881811 + Nusap1 protein_coding processed_transcript MGP_CBAJ_T0056541.1 MGP_CBAJ_G0026043.1 mouse_genomes_project 2 130862753 130899755 + MGP_CBAJ_P0056541 Nusap1 protein_coding protein_coding MGP_CBAJ_T0056542.1 MGP_CBAJ_G0026043.1 mouse_genomes_project 2 130862765 130874145 + Nusap1 protein_coding processed_transcript MGP_CBAJ_T0058935.1 MGP_CBAJ_G0026592.1 mouse_genomes_project 2 182421508 182442828 + MGP_CBAJ_P0058935 Slc2a10 protein_coding protein_coding MGP_CBAJ_T0058936.1 MGP_CBAJ_G0026592.1 mouse_genomes_project 2 182430987 182437695 + Slc2a10 protein_coding processed_transcript MGP_CBAJ_T0055394.1 MGP_CBAJ_G0025670.1 mouse_genomes_project 2 92895440 92896384 - MGP_CBAJ_P0055394 Olfr1046 protein_coding protein_coding MGP_CBAJ_T0003957.1 MGP_CBAJ_G0003516.1 mouse_genomes_project 2 91713269 91715011 + Gm13716 antisense antisense MGP_CBAJ_T0013662.1 MGP_CBAJ_G0011774.1 mouse_genomes_project 2 172980686 172981046 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011384.1 MGP_CBAJ_G0009522.1 mouse_genomes_project 2 138475250 138475542 - Gm24739 misc_RNA misc_RNA MGP_CBAJ_T0101079.1 MGP_CBAJ_G0039291.1 mouse_genomes_project 2 40476983 40481733 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101080.1 MGP_CBAJ_G0039291.1 mouse_genomes_project 2 40480714 40481487 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0007255.1 MGP_CBAJ_G0005942.1 mouse_genomes_project 2 165565163 165565801 - Gm28450 lincRNA lincRNA MGP_CBAJ_T0058340.1 MGP_CBAJ_G0026453.1 mouse_genomes_project 2 171737568 171760842 - MGP_CBAJ_P0058340 Nfs1 protein_coding protein_coding MGP_CBAJ_T0058341.1 MGP_CBAJ_G0026453.1 mouse_genomes_project 2 171737579 171756604 - MGP_CBAJ_P0058341 Nfs1 protein_coding protein_coding MGP_CBAJ_T0058342.1 MGP_CBAJ_G0026453.1 mouse_genomes_project 2 171755281 171760809 - Nfs1 protein_coding retained_intron MGP_CBAJ_T0058343.1 MGP_CBAJ_G0026453.1 mouse_genomes_project 2 171758570 171760836 - MGP_CBAJ_P0058343 Nfs1 protein_coding protein_coding MGP_CBAJ_T0052913.1 MGP_CBAJ_G0025188.1 mouse_genomes_project 2 25538658 25551378 - Ubac1 protein_coding processed_transcript MGP_CBAJ_T0052914.1 MGP_CBAJ_G0025188.1 mouse_genomes_project 2 25538658 25565205 - MGP_CBAJ_P0052914 Ubac1 protein_coding protein_coding MGP_CBAJ_T0052915.1 MGP_CBAJ_G0025188.1 mouse_genomes_project 2 25538921 25552681 - Ubac1 protein_coding processed_transcript MGP_CBAJ_T0052916.1 MGP_CBAJ_G0025188.1 mouse_genomes_project 2 25548861 25559770 - MGP_CBAJ_P0052916 Ubac1 protein_coding protein_coding MGP_CBAJ_T0052917.1 MGP_CBAJ_G0025188.1 mouse_genomes_project 2 25549984 25564990 - MGP_CBAJ_P0052917 Ubac1 protein_coding protein_coding MGP_CBAJ_T0052918.1 MGP_CBAJ_G0025188.1 mouse_genomes_project 2 25552352 25554411 - Ubac1 protein_coding processed_transcript MGP_CBAJ_T0052919.1 MGP_CBAJ_G0025188.1 mouse_genomes_project 2 25553992 25560936 - Ubac1 protein_coding processed_transcript MGP_CBAJ_T0052920.1 MGP_CBAJ_G0025188.1 mouse_genomes_project 2 25558369 25565024 - Ubac1 protein_coding processed_transcript MGP_CBAJ_T0052921.1 MGP_CBAJ_G0025188.1 mouse_genomes_project 2 25559422 25565060 - Ubac1 protein_coding processed_transcript MGP_CBAJ_T0055058.1 MGP_CBAJ_G0025571.1 mouse_genomes_project 2 81359028 81468761 + MGP_CBAJ_P0055058 Agps protein_coding protein_coding MGP_CBAJ_T0055059.1 MGP_CBAJ_G0025571.1 mouse_genomes_project 2 81359040 81432613 + MGP_CBAJ_P0055059 Agps protein_coding protein_coding MGP_CBAJ_T0055060.1 MGP_CBAJ_G0025571.1 mouse_genomes_project 2 81359356 81463489 + MGP_CBAJ_P0055060 Agps protein_coding protein_coding MGP_CBAJ_T0055061.1 MGP_CBAJ_G0025571.1 mouse_genomes_project 2 81399525 81413988 + MGP_CBAJ_P0055061 Agps protein_coding protein_coding MGP_CBAJ_T0055062.1 MGP_CBAJ_G0025571.1 mouse_genomes_project 2 81405079 81429197 + Agps protein_coding processed_transcript MGP_CBAJ_T0055063.1 MGP_CBAJ_G0025571.1 mouse_genomes_project 2 81431513 81463559 + MGP_CBAJ_P0055063 Agps protein_coding nonsense_mediated_decay MGP_CBAJ_T0055064.1 MGP_CBAJ_G0025571.1 mouse_genomes_project 2 81446572 81449071 + Agps protein_coding retained_intron MGP_CBAJ_T0057842.1 MGP_CBAJ_G0026333.1 mouse_genomes_project 2 165789189 165867663 - MGP_CBAJ_P0057842 Ninl protein_coding protein_coding MGP_CBAJ_T0057843.1 MGP_CBAJ_G0026333.1 mouse_genomes_project 2 165791710 165794459 - Ninl protein_coding processed_transcript MGP_CBAJ_T0057844.1 MGP_CBAJ_G0026333.1 mouse_genomes_project 2 165792224 165806342 - MGP_CBAJ_P0057844 Ninl protein_coding protein_coding MGP_CBAJ_T0057845.1 MGP_CBAJ_G0026333.1 mouse_genomes_project 2 165806040 165807474 - Ninl protein_coding retained_intron MGP_CBAJ_T0057846.1 MGP_CBAJ_G0026333.1 mouse_genomes_project 2 165812108 165825684 - MGP_CBAJ_P0057846 Ninl protein_coding protein_coding MGP_CBAJ_T0057847.1 MGP_CBAJ_G0026333.1 mouse_genomes_project 2 165817987 165825818 - Ninl protein_coding processed_transcript MGP_CBAJ_T0057848.1 MGP_CBAJ_G0026333.1 mouse_genomes_project 2 165818079 165867597 - Ninl protein_coding processed_transcript MGP_CBAJ_T0057849.1 MGP_CBAJ_G0026333.1 mouse_genomes_project 2 165820800 165867641 - Ninl protein_coding processed_transcript MGP_CBAJ_T0057850.1 MGP_CBAJ_G0026333.1 mouse_genomes_project 2 165828726 165904739 - MGP_CBAJ_P0057850 Ninl protein_coding protein_coding MGP_CBAJ_T0001066.1 MGP_CBAJ_G0000997.1 mouse_genomes_project 2 172574103 172577449 - TEC TEC MGP_CBAJ_T0001019.1 MGP_CBAJ_G0000951.1 mouse_genomes_project 2 13489525 13491909 - TEC TEC MGP_CBAJ_T0013478.1 MGP_CBAJ_G0011590.1 mouse_genomes_project 2 94987802 94988329 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013244.1 MGP_CBAJ_G0011356.1 mouse_genomes_project 2 8894485 8895323 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055867.1 MGP_CBAJ_G0025865.1 mouse_genomes_project 2 100414466 100415532 + 1700029I15Rik protein_coding retained_intron MGP_CBAJ_T0055868.1 MGP_CBAJ_G0025865.1 mouse_genomes_project 2 100414846 100415532 + MGP_CBAJ_P0055868 1700029I15Rik protein_coding protein_coding MGP_CBAJ_T0055869.1 MGP_CBAJ_G0025865.1 mouse_genomes_project 2 100414846 100417637 + MGP_CBAJ_P0055869 1700029I15Rik protein_coding protein_coding MGP_CBAJ_T0055870.1 MGP_CBAJ_G0025865.1 mouse_genomes_project 2 100414846 100415518 + MGP_CBAJ_P0055870 1700029I15Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0007304.1 MGP_CBAJ_G0005982.1 mouse_genomes_project 2 185275823 185279781 + Gm14319 lincRNA lincRNA MGP_CBAJ_T0056469.1 MGP_CBAJ_G0026022.1 mouse_genomes_project 2 130048303 130066955 + MGP_CBAJ_P0056469 Bahd1 protein_coding protein_coding MGP_CBAJ_T0056470.1 MGP_CBAJ_G0026022.1 mouse_genomes_project 2 130049379 130075090 + MGP_CBAJ_P0056470 Bahd1 protein_coding protein_coding MGP_CBAJ_T0056471.1 MGP_CBAJ_G0026022.1 mouse_genomes_project 2 130066377 130075081 + MGP_CBAJ_P0056471 Bahd1 protein_coding unknown_likely_coding MGP_CBAJ_T0056122.1 MGP_CBAJ_G0025915.1 mouse_genomes_project 2 113796830 113876165 - MGP_CBAJ_P0056122 Hipk3 protein_coding protein_coding MGP_CBAJ_T0056123.1 MGP_CBAJ_G0025915.1 mouse_genomes_project 2 113800129 113875409 - MGP_CBAJ_P0056123 Hipk3 protein_coding protein_coding MGP_CBAJ_T0056124.1 MGP_CBAJ_G0025915.1 mouse_genomes_project 2 113800203 113875673 - MGP_CBAJ_P0056124 Hipk3 protein_coding protein_coding MGP_CBAJ_T0056125.1 MGP_CBAJ_G0025915.1 mouse_genomes_project 2 113804074 113809475 - Hipk3 protein_coding processed_transcript MGP_CBAJ_T0101796.1 MGP_CBAJ_G0039827.1 mouse_genomes_project 2 92427589 92428277 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0017574.1 MGP_CBAJ_G0015195.1 mouse_genomes_project 2 119680604 119681532 + Gm20638 processed_transcript processed_transcript MGP_CBAJ_T0003864.1 MGP_CBAJ_G0003448.1 mouse_genomes_project 2 29953948 29955543 - 2600006K01Rik antisense antisense MGP_CBAJ_T0057677.1 MGP_CBAJ_G0026286.1 mouse_genomes_project 2 158670406 158684717 + MGP_CBAJ_P0057677 Polr3f protein_coding protein_coding MGP_CBAJ_T0057678.1 MGP_CBAJ_G0026286.1 mouse_genomes_project 2 158670430 158673384 + Polr3f protein_coding processed_transcript MGP_CBAJ_T0057679.1 MGP_CBAJ_G0026286.1 mouse_genomes_project 2 158670436 158677895 + MGP_CBAJ_P0057679 Polr3f protein_coding protein_coding MGP_CBAJ_T0057680.1 MGP_CBAJ_G0026286.1 mouse_genomes_project 2 158670468 158677412 + Polr3f protein_coding processed_transcript MGP_CBAJ_T0057681.1 MGP_CBAJ_G0026286.1 mouse_genomes_project 2 158675081 158681516 + Polr3f protein_coding processed_transcript MGP_CBAJ_T0057682.1 MGP_CBAJ_G0026286.1 mouse_genomes_project 2 158678662 158679350 + Polr3f protein_coding processed_transcript MGP_CBAJ_T0057683.1 MGP_CBAJ_G0026286.1 mouse_genomes_project 2 158678897 158681616 + Polr3f protein_coding processed_transcript MGP_CBAJ_T0011371.1 MGP_CBAJ_G0009509.1 mouse_genomes_project 2 47414128 47414329 + Vis1 misc_RNA misc_RNA MGP_CBAJ_T0058111.1 MGP_CBAJ_G0026412.1 mouse_genomes_project 2 169914619 169920525 + 1700003F12Rik protein_coding retained_intron MGP_CBAJ_T0058113.1 MGP_CBAJ_G0026412.1 mouse_genomes_project 2 169919594 169920710 + MGP_CBAJ_P0058113 1700003F12Rik protein_coding protein_coding MGP_CBAJ_T0058114.1 MGP_CBAJ_G0026412.1 mouse_genomes_project 2 169919633 169920710 + MGP_CBAJ_P0058114 1700003F12Rik protein_coding protein_coding MGP_CBAJ_T0057101.1 MGP_CBAJ_G0026151.1 mouse_genomes_project 2 139568991 139583612 + Snrnp200 protein_coding retained_intron MGP_CBAJ_T0057102.1 MGP_CBAJ_G0026151.1 mouse_genomes_project 2 139569004 139602699 + MGP_CBAJ_P0057102 Snrnp200 protein_coding protein_coding MGP_CBAJ_T0057103.1 MGP_CBAJ_G0026151.1 mouse_genomes_project 2 139582585 139587231 + Snrnp200 protein_coding processed_transcript MGP_CBAJ_T0057104.1 MGP_CBAJ_G0026151.1 mouse_genomes_project 2 139599094 139600559 + Snrnp200 protein_coding retained_intron MGP_CBAJ_T0057105.1 MGP_CBAJ_G0026151.1 mouse_genomes_project 2 139600324 139602208 + Snrnp200 protein_coding retained_intron MGP_CBAJ_T0056550.1 MGP_CBAJ_G0026046.1 mouse_genomes_project 2 131004491 131013435 + MGP_CBAJ_P0056550 Itpka protein_coding protein_coding MGP_CBAJ_T0059478.1 MGP_CBAJ_G0026713.1 mouse_genomes_project 2 200381697 200391236 - MGP_CBAJ_P0059478 Arfrp1 protein_coding protein_coding MGP_CBAJ_T0059479.1 MGP_CBAJ_G0026713.1 mouse_genomes_project 2 200381702 200391324 - MGP_CBAJ_P0059479 Arfrp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059480.1 MGP_CBAJ_G0026713.1 mouse_genomes_project 2 200381758 200384014 - Arfrp1 protein_coding retained_intron MGP_CBAJ_T0059481.1 MGP_CBAJ_G0026713.1 mouse_genomes_project 2 200383188 200391316 - Arfrp1 protein_coding retained_intron MGP_CBAJ_T0059482.1 MGP_CBAJ_G0026713.1 mouse_genomes_project 2 200383301 200391302 - Arfrp1 protein_coding retained_intron MGP_CBAJ_T0059483.1 MGP_CBAJ_G0026713.1 mouse_genomes_project 2 200383375 200390793 - Arfrp1 protein_coding retained_intron MGP_CBAJ_T0059484.1 MGP_CBAJ_G0026713.1 mouse_genomes_project 2 200383582 200391343 - Arfrp1 protein_coding retained_intron MGP_CBAJ_T0059485.1 MGP_CBAJ_G0026713.1 mouse_genomes_project 2 200383588 200391320 - MGP_CBAJ_P0059485 Arfrp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059486.1 MGP_CBAJ_G0026713.1 mouse_genomes_project 2 200385322 200391249 - Arfrp1 protein_coding processed_transcript MGP_CBAJ_T0059487.1 MGP_CBAJ_G0026713.1 mouse_genomes_project 2 200390271 200391333 - Arfrp1 protein_coding retained_intron MGP_CBAJ_T0007240.1 MGP_CBAJ_G0005931.1 mouse_genomes_project 2 151364881 151371667 - Gm14062 lincRNA lincRNA MGP_CBAJ_T0055035.1 MGP_CBAJ_G0025562.1 mouse_genomes_project 2 80067190 80069672 + MGP_CBAJ_P0055035 Hoxd9 protein_coding protein_coding MGP_CBAJ_T0013316.1 MGP_CBAJ_G0011428.1 mouse_genomes_project 2 38179534 38185022 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010308.1 MGP_CBAJ_G0008446.1 mouse_genomes_project 2 100638239 100638311 + Mir7221 miRNA miRNA MGP_CBAJ_T0099085.1 MGP_CBAJ_G0037340.1 mouse_genomes_project 2 1492746 1492853 - Gm23691 snRNA snRNA MGP_CBAJ_T0056533.1 MGP_CBAJ_G0026041.1 mouse_genomes_project 2 130784899 130826874 + MGP_CBAJ_P0056533 Chp1 protein_coding protein_coding MGP_CBAJ_T0056534.1 MGP_CBAJ_G0026041.1 mouse_genomes_project 2 130784926 130829082 + MGP_CBAJ_P0056534 Chp1 protein_coding protein_coding MGP_CBAJ_T0056535.1 MGP_CBAJ_G0026041.1 mouse_genomes_project 2 130785017 130813574 + Chp1 protein_coding retained_intron MGP_CBAJ_T0056536.1 MGP_CBAJ_G0026041.1 mouse_genomes_project 2 130806253 130827457 + Chp1 protein_coding retained_intron MGP_CBAJ_T0052540.1 MGP_CBAJ_G0025120.1 mouse_genomes_project 2 23651296 23668121 + MGP_CBAJ_P0052540 Il1rn protein_coding protein_coding MGP_CBAJ_T0052541.1 MGP_CBAJ_G0025120.1 mouse_genomes_project 2 23651299 23653853 + Il1rn protein_coding retained_intron MGP_CBAJ_T0052542.1 MGP_CBAJ_G0025120.1 mouse_genomes_project 2 23651299 23666084 + MGP_CBAJ_P0052542 Il1rn protein_coding protein_coding MGP_CBAJ_T0052543.1 MGP_CBAJ_G0025120.1 mouse_genomes_project 2 23661921 23666434 + MGP_CBAJ_P0052543 Il1rn protein_coding protein_coding MGP_CBAJ_T0052544.1 MGP_CBAJ_G0025120.1 mouse_genomes_project 2 23661943 23667563 + MGP_CBAJ_P0052544 Il1rn protein_coding protein_coding MGP_CBAJ_T0052545.1 MGP_CBAJ_G0025120.1 mouse_genomes_project 2 23661981 23662981 + Il1rn protein_coding processed_transcript MGP_CBAJ_T0013692.1 MGP_CBAJ_G0011804.1 mouse_genomes_project 2 192486151 192486806 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0053915.1 MGP_CBAJ_G0025343.1 mouse_genomes_project 2 33835075 34085806 - MGP_CBAJ_P0053915 Ralgps1 protein_coding protein_coding MGP_CBAJ_T0053916.1 MGP_CBAJ_G0025343.1 mouse_genomes_project 2 33835079 34085831 - MGP_CBAJ_P0053916 Ralgps1 protein_coding protein_coding MGP_CBAJ_T0053917.1 MGP_CBAJ_G0025343.1 mouse_genomes_project 2 33835079 34085831 - MGP_CBAJ_P0053917 Ralgps1 protein_coding protein_coding MGP_CBAJ_T0053918.1 MGP_CBAJ_G0025343.1 mouse_genomes_project 2 33838631 34085831 - MGP_CBAJ_P0053918 Ralgps1 protein_coding protein_coding MGP_CBAJ_T0053919.1 MGP_CBAJ_G0025343.1 mouse_genomes_project 2 33844965 33859824 - Ralgps1 protein_coding processed_transcript MGP_CBAJ_T0053924.1 MGP_CBAJ_G0025343.1 mouse_genomes_project 2 33961010 34085831 - Ralgps1 protein_coding retained_intron MGP_CBAJ_T0013592.1 MGP_CBAJ_G0011704.1 mouse_genomes_project 2 147942128 147942441 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0053549.1 MGP_CBAJ_G0025290.1 mouse_genomes_project 2 31276172 31283479 - MGP_CBAJ_P0053549 Tor1a protein_coding protein_coding MGP_CBAJ_T0053550.1 MGP_CBAJ_G0025290.1 mouse_genomes_project 2 31276225 31283418 - Tor1a protein_coding retained_intron MGP_CBAJ_T0053551.1 MGP_CBAJ_G0025290.1 mouse_genomes_project 2 31276557 31279394 - Tor1a protein_coding retained_intron MGP_CBAJ_T0053552.1 MGP_CBAJ_G0025290.1 mouse_genomes_project 2 31276598 31279421 - Tor1a protein_coding retained_intron MGP_CBAJ_T0053553.1 MGP_CBAJ_G0025290.1 mouse_genomes_project 2 31282456 31283434 - Tor1a protein_coding retained_intron MGP_CBAJ_T0100400.1 MGP_CBAJ_G0038655.1 mouse_genomes_project 2 158362807 158362945 - Gm26165 snoRNA snoRNA MGP_CBAJ_T0100363.1 MGP_CBAJ_G0038618.1 mouse_genomes_project 2 51915293 51915414 - Gm25215 snoRNA snoRNA MGP_CBAJ_T0007107.1 MGP_CBAJ_G0005822.1 mouse_genomes_project 2 58656047 58660394 - Gm26794 lincRNA lincRNA MGP_CBAJ_T0055073.1 MGP_CBAJ_G0025578.1 mouse_genomes_project 2 82006474 82007898 + Osbpl6 protein_coding processed_transcript MGP_CBAJ_T0055074.1 MGP_CBAJ_G0025578.1 mouse_genomes_project 2 82006504 82211717 + MGP_CBAJ_P0055074 Osbpl6 protein_coding protein_coding MGP_CBAJ_T0055075.1 MGP_CBAJ_G0025578.1 mouse_genomes_project 2 82006504 82211721 + MGP_CBAJ_P0055075 Osbpl6 protein_coding protein_coding MGP_CBAJ_T0055076.1 MGP_CBAJ_G0025578.1 mouse_genomes_project 2 82006524 82207670 + MGP_CBAJ_P0055076 Osbpl6 protein_coding protein_coding MGP_CBAJ_T0055077.1 MGP_CBAJ_G0025578.1 mouse_genomes_project 2 82006527 82007434 + Osbpl6 protein_coding processed_transcript MGP_CBAJ_T0055078.1 MGP_CBAJ_G0025578.1 mouse_genomes_project 2 82098936 82142880 + Osbpl6 protein_coding processed_transcript MGP_CBAJ_T0055079.1 MGP_CBAJ_G0025578.1 mouse_genomes_project 2 82153049 82207119 + MGP_CBAJ_P0055079 Osbpl6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0055080.1 MGP_CBAJ_G0025578.1 mouse_genomes_project 2 82172829 82186579 + Osbpl6 protein_coding processed_transcript MGP_CBAJ_T0101819.1 MGP_CBAJ_G0039850.1 mouse_genomes_project 2 97744380 97745305 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0003993.1 MGP_CBAJ_G0003538.1 mouse_genomes_project 2 130152003 130155599 + Gm14089 antisense antisense MGP_CBAJ_T0007298.1 MGP_CBAJ_G0005978.1 mouse_genomes_project 2 185077361 185121745 + A530013C23Rik lincRNA lincRNA MGP_CBAJ_T0007299.1 MGP_CBAJ_G0005978.1 mouse_genomes_project 2 185077365 185083978 + A530013C23Rik lincRNA lincRNA MGP_CBAJ_T0054789.1 MGP_CBAJ_G0025515.1 mouse_genomes_project 2 74458678 74459924 + Ppig protein_coding processed_transcript MGP_CBAJ_T0054790.1 MGP_CBAJ_G0025515.1 mouse_genomes_project 2 74458938 74501200 + MGP_CBAJ_P0054790 Ppig protein_coding protein_coding MGP_CBAJ_T0054791.1 MGP_CBAJ_G0025515.1 mouse_genomes_project 2 74458987 74479100 + Ppig protein_coding processed_transcript MGP_CBAJ_T0054792.1 MGP_CBAJ_G0025515.1 mouse_genomes_project 2 74459036 74478135 + Ppig protein_coding processed_transcript MGP_CBAJ_T0054793.1 MGP_CBAJ_G0025515.1 mouse_genomes_project 2 74459226 74501200 + MGP_CBAJ_P0054793 Ppig protein_coding protein_coding MGP_CBAJ_T0054794.1 MGP_CBAJ_G0025515.1 mouse_genomes_project 2 74459459 74481916 + Ppig protein_coding processed_transcript MGP_CBAJ_T0054795.1 MGP_CBAJ_G0025515.1 mouse_genomes_project 2 74474999 74481677 + MGP_CBAJ_P0054795 Ppig protein_coding protein_coding MGP_CBAJ_T0054796.1 MGP_CBAJ_G0025515.1 mouse_genomes_project 2 74477554 74487234 + Ppig protein_coding processed_transcript MGP_CBAJ_T0054797.1 MGP_CBAJ_G0025515.1 mouse_genomes_project 2 74477802 74478853 + Ppig protein_coding processed_transcript MGP_CBAJ_T0054798.1 MGP_CBAJ_G0025515.1 mouse_genomes_project 2 74477971 74478870 + Ppig protein_coding processed_transcript MGP_CBAJ_T0054799.1 MGP_CBAJ_G0025515.1 mouse_genomes_project 2 74481484 74487320 + Ppig protein_coding processed_transcript MGP_CBAJ_T0054800.1 MGP_CBAJ_G0025515.1 mouse_genomes_project 2 74487375 74495049 + Ppig protein_coding processed_transcript MGP_CBAJ_T0100384.1 MGP_CBAJ_G0038639.1 mouse_genomes_project 2 113972600 113972732 + Gm22439 snoRNA snoRNA MGP_CBAJ_T0054680.1 MGP_CBAJ_G0025491.1 mouse_genomes_project 2 69721941 69846172 - MGP_CBAJ_P0054680 protein_coding protein_coding MGP_CBAJ_T0054681.1 MGP_CBAJ_G0025491.1 mouse_genomes_project 2 69723086 69846212 - MGP_CBAJ_P0054681 protein_coding protein_coding MGP_CBAJ_T0054682.1 MGP_CBAJ_G0025491.1 mouse_genomes_project 2 69770555 69775779 - protein_coding processed_transcript MGP_CBAJ_T0054683.1 MGP_CBAJ_G0025491.1 mouse_genomes_project 2 69803670 69809183 - MGP_CBAJ_P0054683 protein_coding protein_coding MGP_CBAJ_T0056288.1 MGP_CBAJ_G0025970.1 mouse_genomes_project 2 122134075 122161610 - MGP_CBAJ_P0056288 protein_coding protein_coding MGP_CBAJ_T0055249.1 MGP_CBAJ_G0025610.1 mouse_genomes_project 2 90897046 90937989 - MGP_CBAJ_P0055249 Tfpi protein_coding protein_coding MGP_CBAJ_T0055250.1 MGP_CBAJ_G0025610.1 mouse_genomes_project 2 90897046 90939484 - MGP_CBAJ_P0055250 Tfpi protein_coding protein_coding MGP_CBAJ_T0055251.1 MGP_CBAJ_G0025610.1 mouse_genomes_project 2 90897051 90898880 - Tfpi protein_coding processed_transcript MGP_CBAJ_T0055252.1 MGP_CBAJ_G0025610.1 mouse_genomes_project 2 90897051 90938379 - MGP_CBAJ_P0055252 Tfpi protein_coding protein_coding MGP_CBAJ_T0055253.1 MGP_CBAJ_G0025610.1 mouse_genomes_project 2 90904425 90942400 - MGP_CBAJ_P0055253 Tfpi protein_coding protein_coding MGP_CBAJ_T0055254.1 MGP_CBAJ_G0025610.1 mouse_genomes_project 2 90904425 90942412 - MGP_CBAJ_P0055254 Tfpi protein_coding protein_coding MGP_CBAJ_T0055255.1 MGP_CBAJ_G0025610.1 mouse_genomes_project 2 90904425 90942385 - MGP_CBAJ_P0055255 Tfpi protein_coding protein_coding MGP_CBAJ_T0055256.1 MGP_CBAJ_G0025610.1 mouse_genomes_project 2 90904425 90922315 - MGP_CBAJ_P0055256 Tfpi protein_coding protein_coding MGP_CBAJ_T0055257.1 MGP_CBAJ_G0025610.1 mouse_genomes_project 2 90905008 90938008 - MGP_CBAJ_P0055257 Tfpi protein_coding protein_coding MGP_CBAJ_T0055258.1 MGP_CBAJ_G0025610.1 mouse_genomes_project 2 90908354 90938004 - Tfpi protein_coding processed_transcript MGP_CBAJ_T0013238.1 MGP_CBAJ_G0011350.1 mouse_genomes_project 2 5738846 5739500 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0054899.1 MGP_CBAJ_G0025534.1 mouse_genomes_project 2 76369423 76427968 + MGP_CBAJ_P0054899 Hat1 protein_coding protein_coding MGP_CBAJ_T0054900.1 MGP_CBAJ_G0025534.1 mouse_genomes_project 2 76369725 76427968 + MGP_CBAJ_P0054900 Hat1 protein_coding protein_coding MGP_CBAJ_T0054902.1 MGP_CBAJ_G0025534.1 mouse_genomes_project 2 76404243 76422848 + Hat1 protein_coding processed_transcript MGP_CBAJ_T0055561.1 MGP_CBAJ_G0025811.1 mouse_genomes_project 2 97449469 97450375 - MGP_CBAJ_P0055561 Olfr48 protein_coding protein_coding MGP_CBAJ_T0100354.1 MGP_CBAJ_G0038609.1 mouse_genomes_project 2 33496041 33496169 + Gm24165 snoRNA snoRNA MGP_CBAJ_T0101827.1 MGP_CBAJ_G0039858.1 mouse_genomes_project 2 134186049 134186325 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0059382.1 MGP_CBAJ_G0026699.1 mouse_genomes_project 2 199911783 199935131 - MGP_CBAJ_P0059382 Nkain4 protein_coding protein_coding MGP_CBAJ_T0059383.1 MGP_CBAJ_G0026699.1 mouse_genomes_project 2 199911783 199935131 - MGP_CBAJ_P0059383 Nkain4 protein_coding protein_coding MGP_CBAJ_T0059384.1 MGP_CBAJ_G0026699.1 mouse_genomes_project 2 199911783 199920226 - MGP_CBAJ_P0059384 Nkain4 protein_coding protein_coding MGP_CBAJ_T0059385.1 MGP_CBAJ_G0026699.1 mouse_genomes_project 2 199913001 199935052 - MGP_CBAJ_P0059385 Nkain4 protein_coding protein_coding MGP_CBAJ_T0059386.1 MGP_CBAJ_G0026699.1 mouse_genomes_project 2 199914197 199935126 - MGP_CBAJ_P0059386 Nkain4 protein_coding protein_coding MGP_CBAJ_T0059387.1 MGP_CBAJ_G0026699.1 mouse_genomes_project 2 199920312 199934751 - Nkain4 protein_coding processed_transcript MGP_CBAJ_T0059388.1 MGP_CBAJ_G0026699.1 mouse_genomes_project 2 199920889 199930039 - MGP_CBAJ_P0059388 Nkain4 protein_coding protein_coding MGP_CBAJ_T0054849.1 MGP_CBAJ_G0025526.1 mouse_genomes_project 2 75544982 75545843 - MGP_CBAJ_P0054849 Gm26558 protein_coding protein_coding MGP_CBAJ_T0003894.1 MGP_CBAJ_G0003473.1 mouse_genomes_project 2 40295466 40297012 - Gm13496 antisense antisense MGP_CBAJ_T0011388.1 MGP_CBAJ_G0009526.1 mouse_genomes_project 2 159650483 159650808 - Gm22390 misc_RNA misc_RNA MGP_CBAJ_T0101791.1 MGP_CBAJ_G0039822.1 mouse_genomes_project 2 92165647 92166568 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0052511.1 MGP_CBAJ_G0025109.1 mouse_genomes_project 2 22326257 22374668 + MGP_CBAJ_P0052511 Yme1l1 protein_coding protein_coding MGP_CBAJ_T0052512.1 MGP_CBAJ_G0025109.1 mouse_genomes_project 2 22326406 22349603 + Yme1l1 protein_coding processed_transcript MGP_CBAJ_T0052513.1 MGP_CBAJ_G0025109.1 mouse_genomes_project 2 22326416 22330504 + Yme1l1 protein_coding processed_transcript MGP_CBAJ_T0052514.1 MGP_CBAJ_G0025109.1 mouse_genomes_project 2 22326721 22337109 + Yme1l1 protein_coding processed_transcript MGP_CBAJ_T0052515.1 MGP_CBAJ_G0025109.1 mouse_genomes_project 2 22340904 22346131 + Yme1l1 protein_coding processed_transcript MGP_CBAJ_T0052516.1 MGP_CBAJ_G0025109.1 mouse_genomes_project 2 22368553 22370790 + Yme1l1 protein_coding processed_transcript MGP_CBAJ_T0013644.1 MGP_CBAJ_G0011756.1 mouse_genomes_project 2 169426466 169427065 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0017532.1 MGP_CBAJ_G0015170.1 mouse_genomes_project 2 78617814 78651574 + D230022J07Rik processed_transcript processed_transcript MGP_CBAJ_T0100413.1 MGP_CBAJ_G0038668.1 mouse_genomes_project 2 174329679 174329810 - Gm24411 snoRNA snoRNA MGP_CBAJ_T0013484.1 MGP_CBAJ_G0011596.1 mouse_genomes_project 2 99548048 99548286 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0055166.1 MGP_CBAJ_G0025590.1 mouse_genomes_project 2 85183446 85191527 - MGP_CBAJ_P0055166 Cerkl protein_coding protein_coding MGP_CBAJ_T0055167.1 MGP_CBAJ_G0025590.1 mouse_genomes_project 2 85184655 85305231 - Cerkl protein_coding processed_transcript MGP_CBAJ_T0055168.1 MGP_CBAJ_G0025590.1 mouse_genomes_project 2 85185405 85186613 - Cerkl protein_coding processed_transcript MGP_CBAJ_T0055169.1 MGP_CBAJ_G0025590.1 mouse_genomes_project 2 85185433 85305168 - MGP_CBAJ_P0055169 Cerkl protein_coding protein_coding MGP_CBAJ_T0055170.1 MGP_CBAJ_G0025590.1 mouse_genomes_project 2 85185478 85305168 - MGP_CBAJ_P0055170 Cerkl protein_coding unknown_likely_coding MGP_CBAJ_T0055171.1 MGP_CBAJ_G0025590.1 mouse_genomes_project 2 85185496 85305184 - Cerkl protein_coding processed_transcript MGP_CBAJ_T0055172.1 MGP_CBAJ_G0025590.1 mouse_genomes_project 2 85185496 85305168 - Cerkl protein_coding processed_transcript MGP_CBAJ_T0055173.1 MGP_CBAJ_G0025590.1 mouse_genomes_project 2 85185498 85305274 - Cerkl protein_coding processed_transcript MGP_CBAJ_T0055174.1 MGP_CBAJ_G0025590.1 mouse_genomes_project 2 85191492 85341928 - Cerkl protein_coding processed_transcript MGP_CBAJ_T0055175.1 MGP_CBAJ_G0025590.1 mouse_genomes_project 2 85199149 85232422 - Cerkl protein_coding processed_transcript MGP_CBAJ_T0055176.1 MGP_CBAJ_G0025590.1 mouse_genomes_project 2 85210727 85232447 - Cerkl protein_coding processed_transcript MGP_CBAJ_T0055177.1 MGP_CBAJ_G0025590.1 mouse_genomes_project 2 85248946 85252364 - Cerkl protein_coding processed_transcript MGP_CBAJ_T0055178.1 MGP_CBAJ_G0025590.1 mouse_genomes_project 2 85250072 85256402 - Cerkl protein_coding processed_transcript MGP_CBAJ_T0058964.1 MGP_CBAJ_G0026595.1 mouse_genomes_project 2 183040107 183136234 + MGP_CBAJ_P0058964 Ncoa3 protein_coding protein_coding MGP_CBAJ_T0058965.1 MGP_CBAJ_G0026595.1 mouse_genomes_project 2 183040108 183141064 + MGP_CBAJ_P0058965 Ncoa3 protein_coding protein_coding MGP_CBAJ_T0058966.1 MGP_CBAJ_G0026595.1 mouse_genomes_project 2 183109501 183113959 + Ncoa3 protein_coding processed_transcript MGP_CBAJ_T0058967.1 MGP_CBAJ_G0026595.1 mouse_genomes_project 2 183125600 183130965 + Ncoa3 protein_coding retained_intron MGP_CBAJ_T0058968.1 MGP_CBAJ_G0026595.1 mouse_genomes_project 2 183132217 183134967 + Ncoa3 protein_coding retained_intron MGP_CBAJ_T0097498.1 MGP_CBAJ_G0035889.1 mouse_genomes_project X 171126548 171170859 - MGP_CBAJ_P0097498 Grpr protein_coding protein_coding MGP_CBAJ_T0097360.1 MGP_CBAJ_G0035859.1 mouse_genomes_project X 162497792 162744188 + Gm15155 protein_coding processed_transcript MGP_CBAJ_T0097361.1 MGP_CBAJ_G0035859.1 mouse_genomes_project X 162497826 163289498 + MGP_CBAJ_P0097361 Gm15155 protein_coding protein_coding MGP_CBAJ_T0016314.1 MGP_CBAJ_G0014426.1 mouse_genomes_project X 100803302 100803790 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095170.1 MGP_CBAJ_G0035224.1 mouse_genomes_project X 8062857 8083688 - MGP_CBAJ_P0095170 1810030O07Rik protein_coding protein_coding MGP_CBAJ_T0096188.1 MGP_CBAJ_G0035512.1 mouse_genomes_project X 75505122 75545493 + MGP_CBAJ_P0096188 Brcc3 protein_coding protein_coding MGP_CBAJ_T0096189.1 MGP_CBAJ_G0035512.1 mouse_genomes_project X 75505191 75543510 + MGP_CBAJ_P0096189 Brcc3 protein_coding protein_coding MGP_CBAJ_T0096190.1 MGP_CBAJ_G0035512.1 mouse_genomes_project X 75505194 75542257 + Brcc3 protein_coding retained_intron MGP_CBAJ_T0096191.1 MGP_CBAJ_G0035512.1 mouse_genomes_project X 75505204 75543233 + MGP_CBAJ_P0096191 Brcc3 protein_coding protein_coding MGP_CBAJ_T0096192.1 MGP_CBAJ_G0035512.1 mouse_genomes_project X 75505210 75528229 + MGP_CBAJ_P0096192 Brcc3 protein_coding protein_coding MGP_CBAJ_T0096193.1 MGP_CBAJ_G0035512.1 mouse_genomes_project X 75505801 75525713 + MGP_CBAJ_P0096193 Brcc3 protein_coding protein_coding MGP_CBAJ_T0096194.1 MGP_CBAJ_G0035512.1 mouse_genomes_project X 75524215 75542749 + Brcc3 protein_coding retained_intron MGP_CBAJ_T0096518.1 MGP_CBAJ_G0035612.1 mouse_genomes_project X 103944403 103959934 - MGP_CBAJ_P0096518 Zmym3 protein_coding protein_coding MGP_CBAJ_T0096519.1 MGP_CBAJ_G0035612.1 mouse_genomes_project X 103944403 103960869 - MGP_CBAJ_P0096519 Zmym3 protein_coding protein_coding MGP_CBAJ_T0096520.1 MGP_CBAJ_G0035612.1 mouse_genomes_project X 103944403 103960736 - MGP_CBAJ_P0096520 Zmym3 protein_coding protein_coding MGP_CBAJ_T0096521.1 MGP_CBAJ_G0035612.1 mouse_genomes_project X 103944403 103959818 - MGP_CBAJ_P0096521 Zmym3 protein_coding protein_coding MGP_CBAJ_T0096522.1 MGP_CBAJ_G0035612.1 mouse_genomes_project X 103945998 103949754 - Zmym3 protein_coding processed_transcript MGP_CBAJ_T0096523.1 MGP_CBAJ_G0035612.1 mouse_genomes_project X 103953263 103954939 - Zmym3 protein_coding retained_intron MGP_CBAJ_T0096524.1 MGP_CBAJ_G0035612.1 mouse_genomes_project X 103954220 103957497 - Zmym3 protein_coding processed_transcript MGP_CBAJ_T0096525.1 MGP_CBAJ_G0035612.1 mouse_genomes_project X 103954528 103955186 - Zmym3 protein_coding retained_intron MGP_CBAJ_T0096526.1 MGP_CBAJ_G0035612.1 mouse_genomes_project X 103954948 103957396 - Zmym3 protein_coding retained_intron MGP_CBAJ_T0096527.1 MGP_CBAJ_G0035612.1 mouse_genomes_project X 103954949 103959829 - MGP_CBAJ_P0096527 Zmym3 protein_coding protein_coding MGP_CBAJ_T0096528.1 MGP_CBAJ_G0035612.1 mouse_genomes_project X 103954952 103960705 - MGP_CBAJ_P0096528 Zmym3 protein_coding protein_coding MGP_CBAJ_T0096529.1 MGP_CBAJ_G0035612.1 mouse_genomes_project X 103954952 103959861 - MGP_CBAJ_P0096529 Zmym3 protein_coding protein_coding MGP_CBAJ_T0096530.1 MGP_CBAJ_G0035612.1 mouse_genomes_project X 103954957 103960236 - MGP_CBAJ_P0096530 Zmym3 protein_coding protein_coding MGP_CBAJ_T0096531.1 MGP_CBAJ_G0035612.1 mouse_genomes_project X 103954977 103960384 - MGP_CBAJ_P0096531 Zmym3 protein_coding protein_coding MGP_CBAJ_T0096532.1 MGP_CBAJ_G0035612.1 mouse_genomes_project X 103955034 103957393 - Zmym3 protein_coding retained_intron MGP_CBAJ_T0096533.1 MGP_CBAJ_G0035612.1 mouse_genomes_project X 103956206 103959849 - Zmym3 protein_coding processed_transcript MGP_CBAJ_T0096534.1 MGP_CBAJ_G0035612.1 mouse_genomes_project X 103956293 103957710 - Zmym3 protein_coding retained_intron MGP_CBAJ_T0096535.1 MGP_CBAJ_G0035612.1 mouse_genomes_project X 103956402 103959880 - MGP_CBAJ_P0096535 Zmym3 protein_coding protein_coding MGP_CBAJ_T0010996.1 MGP_CBAJ_G0009134.1 mouse_genomes_project X 15042333 15042412 - Mir222 miRNA miRNA MGP_CBAJ_T0016427.1 MGP_CBAJ_G0014539.1 mouse_genomes_project X 119275854 119282633 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016402.1 MGP_CBAJ_G0014514.1 mouse_genomes_project X 115464497 115465228 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097231.1 MGP_CBAJ_G0035827.1 mouse_genomes_project X 157575182 157586131 - MGP_CBAJ_P0097231 Tsr2 protein_coding protein_coding MGP_CBAJ_T0097232.1 MGP_CBAJ_G0035827.1 mouse_genomes_project X 157575183 157586131 - MGP_CBAJ_P0097232 Tsr2 protein_coding protein_coding MGP_CBAJ_T0097233.1 MGP_CBAJ_G0035827.1 mouse_genomes_project X 157577569 157586131 - MGP_CBAJ_P0097233 Tsr2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0097234.1 MGP_CBAJ_G0035827.1 mouse_genomes_project X 157577780 157586111 - Tsr2 protein_coding processed_transcript MGP_CBAJ_T0016555.1 MGP_CBAJ_G0014667.1 mouse_genomes_project X 150285834 150286144 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095667.1 MGP_CBAJ_G0035394.1 mouse_genomes_project X 55529461 55538858 - Arhgef6 protein_coding retained_intron MGP_CBAJ_T0095668.1 MGP_CBAJ_G0035394.1 mouse_genomes_project X 55529461 55647560 - MGP_CBAJ_P0095668 Arhgef6 protein_coding protein_coding MGP_CBAJ_T0095669.1 MGP_CBAJ_G0035394.1 mouse_genomes_project X 55531416 55586931 - MGP_CBAJ_P0095669 Arhgef6 protein_coding protein_coding MGP_CBAJ_T0095670.1 MGP_CBAJ_G0035394.1 mouse_genomes_project X 55537198 55550876 - MGP_CBAJ_P0095670 Arhgef6 protein_coding protein_coding MGP_CBAJ_T0095671.1 MGP_CBAJ_G0035394.1 mouse_genomes_project X 55548514 55635436 - MGP_CBAJ_P0095671 Arhgef6 protein_coding protein_coding MGP_CBAJ_T0095672.1 MGP_CBAJ_G0035394.1 mouse_genomes_project X 55573844 55635438 - Arhgef6 protein_coding retained_intron MGP_CBAJ_T0095673.1 MGP_CBAJ_G0035394.1 mouse_genomes_project X 55605493 55609704 - Arhgef6 protein_coding processed_transcript MGP_CBAJ_T0095674.1 MGP_CBAJ_G0035394.1 mouse_genomes_project X 55644734 55647337 - Arhgef6 protein_coding retained_intron MGP_CBAJ_T0099697.1 MGP_CBAJ_G0037952.1 mouse_genomes_project X 112324627 112324794 - Gm23322 snRNA snRNA MGP_CBAJ_T0102248.1 MGP_CBAJ_G0040277.1 mouse_genomes_project X 74896491 74896629 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0095868.1 MGP_CBAJ_G0035462.1 mouse_genomes_project X 73546255 73576114 - MGP_CBAJ_P0095868 Bcap31 protein_coding protein_coding MGP_CBAJ_T0100973.1 MGP_CBAJ_G0039228.1 mouse_genomes_project X 163396258 163396355 - Gm23404 snoRNA snoRNA MGP_CBAJ_T0016563.1 MGP_CBAJ_G0014675.1 mouse_genomes_project X 151334481 151335115 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016298.1 MGP_CBAJ_G0014410.1 mouse_genomes_project X 96985960 96987205 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097122.1 MGP_CBAJ_G0035810.1 mouse_genomes_project X 149932118 150008489 - MGP_CBAJ_P0097122 Dcx protein_coding protein_coding MGP_CBAJ_T0097123.1 MGP_CBAJ_G0035810.1 mouse_genomes_project X 149936987 150008382 - MGP_CBAJ_P0097123 Dcx protein_coding protein_coding MGP_CBAJ_T0097124.1 MGP_CBAJ_G0035810.1 mouse_genomes_project X 149938058 150008302 - MGP_CBAJ_P0097124 Dcx protein_coding protein_coding MGP_CBAJ_T0097125.1 MGP_CBAJ_G0035810.1 mouse_genomes_project X 149939749 150008397 - MGP_CBAJ_P0097125 Dcx protein_coding protein_coding MGP_CBAJ_T0097126.1 MGP_CBAJ_G0035810.1 mouse_genomes_project X 149945486 150008228 - Dcx protein_coding retained_intron MGP_CBAJ_T0097127.1 MGP_CBAJ_G0035810.1 mouse_genomes_project X 149950004 150008297 - Dcx protein_coding retained_intron MGP_CBAJ_T0095498.1 MGP_CBAJ_G0035332.1 mouse_genomes_project X 45291358 45351261 + MGP_CBAJ_P0095498 Ocrl protein_coding protein_coding MGP_CBAJ_T0095499.1 MGP_CBAJ_G0035332.1 mouse_genomes_project X 45291409 45337614 + MGP_CBAJ_P0095499 Ocrl protein_coding protein_coding MGP_CBAJ_T0095500.1 MGP_CBAJ_G0035332.1 mouse_genomes_project X 45291426 45337597 + Ocrl protein_coding processed_transcript MGP_CBAJ_T0095501.1 MGP_CBAJ_G0035332.1 mouse_genomes_project X 45291438 45294556 + Ocrl protein_coding retained_intron MGP_CBAJ_T0095502.1 MGP_CBAJ_G0035332.1 mouse_genomes_project X 45291942 45351266 + MGP_CBAJ_P0095502 Ocrl protein_coding protein_coding MGP_CBAJ_T0095503.1 MGP_CBAJ_G0035332.1 mouse_genomes_project X 45309027 45310170 + Ocrl protein_coding retained_intron MGP_CBAJ_T0095504.1 MGP_CBAJ_G0035332.1 mouse_genomes_project X 45317239 45328995 + MGP_CBAJ_P0095504 Ocrl protein_coding protein_coding MGP_CBAJ_T0016444.1 MGP_CBAJ_G0014556.1 mouse_genomes_project X 122764697 122765806 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095964.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73945171 73955174 - MGP_CBAJ_P0095964 Irak1 protein_coding protein_coding MGP_CBAJ_T0095965.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73945175 73955171 - MGP_CBAJ_P0095965 Irak1 protein_coding protein_coding MGP_CBAJ_T0095966.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73945183 73955171 - MGP_CBAJ_P0095966 Irak1 protein_coding protein_coding MGP_CBAJ_T0095967.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73945183 73955171 - MGP_CBAJ_P0095967 Irak1 protein_coding protein_coding MGP_CBAJ_T0095968.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73946051 73955082 - Irak1 protein_coding retained_intron MGP_CBAJ_T0095969.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73946051 73955082 - Irak1 protein_coding retained_intron MGP_CBAJ_T0095970.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73946216 73955169 - MGP_CBAJ_P0095970 Irak1 protein_coding protein_coding MGP_CBAJ_T0095971.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73946603 73949580 - MGP_CBAJ_P0095971 Irak1 protein_coding protein_coding MGP_CBAJ_T0095972.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73946617 73951187 - MGP_CBAJ_P0095972 Irak1 protein_coding protein_coding MGP_CBAJ_T0095973.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73946685 73955001 - MGP_CBAJ_P0095973 Irak1 protein_coding protein_coding MGP_CBAJ_T0095974.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73946685 73955001 - MGP_CBAJ_P0095974 Irak1 protein_coding protein_coding MGP_CBAJ_T0095975.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73947793 73952234 - MGP_CBAJ_P0095975 Irak1 protein_coding protein_coding MGP_CBAJ_T0095976.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73948375 73953741 - MGP_CBAJ_P0095976 Irak1 protein_coding protein_coding MGP_CBAJ_T0095977.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73952245 73953896 - Irak1 protein_coding retained_intron MGP_CBAJ_T0095978.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73952245 73954336 - MGP_CBAJ_P0095978 Irak1 protein_coding protein_coding MGP_CBAJ_T0095979.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73953431 73954418 - MGP_CBAJ_P0095979 Irak1 protein_coding protein_coding MGP_CBAJ_T0095980.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73953473 73954189 - MGP_CBAJ_P0095980 Irak1 protein_coding protein_coding MGP_CBAJ_T0095981.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73953482 73954983 - Irak1 protein_coding processed_transcript MGP_CBAJ_T0095982.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73953862 73955064 - Irak1 protein_coding retained_intron MGP_CBAJ_T0095983.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73953877 73954632 - Irak1 protein_coding retained_intron MGP_CBAJ_T0095984.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73953990 73954764 - Irak1 protein_coding processed_transcript MGP_CBAJ_T0095985.1 MGP_CBAJ_G0035475.1 mouse_genomes_project X 73954339 73955087 - Irak1 protein_coding retained_intron MGP_CBAJ_T0096996.1 MGP_CBAJ_G0035767.1 mouse_genomes_project X 142649353 142681547 + MGP_CBAJ_P0096996 Fam199x protein_coding protein_coding MGP_CBAJ_T0009268.1 MGP_CBAJ_G0007432.1 mouse_genomes_project X 33224581 33226986 - Mdrl lincRNA lincRNA MGP_CBAJ_T0095570.1 MGP_CBAJ_G0035352.1 mouse_genomes_project X 47392720 47393653 - MGP_CBAJ_P0095570 Olfr1322 protein_coding protein_coding MGP_CBAJ_T0016308.1 MGP_CBAJ_G0014420.1 mouse_genomes_project X 99172049 99172584 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095121.1 MGP_CBAJ_G0035208.1 mouse_genomes_project X 4206651 4208432 + MGP_CBAJ_P0095121 4930402K13Rik protein_coding protein_coding MGP_CBAJ_T0102259.1 MGP_CBAJ_G0040288.1 mouse_genomes_project X 87362146 87363187 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016306.1 MGP_CBAJ_G0014418.1 mouse_genomes_project X 98746272 98747980 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011010.1 MGP_CBAJ_G0009148.1 mouse_genomes_project X 50116121 50116230 - Mir717 miRNA miRNA MGP_CBAJ_T0097365.1 MGP_CBAJ_G0035861.1 mouse_genomes_project X 164479869 164535452 - MGP_CBAJ_P0097365 Sms protein_coding protein_coding MGP_CBAJ_T0097366.1 MGP_CBAJ_G0035861.1 mouse_genomes_project X 164494166 164502184 - Sms protein_coding retained_intron MGP_CBAJ_T0097367.1 MGP_CBAJ_G0035861.1 mouse_genomes_project X 164500196 164535209 - Sms protein_coding retained_intron MGP_CBAJ_T0097368.1 MGP_CBAJ_G0035861.1 mouse_genomes_project X 164507186 164534537 - MGP_CBAJ_P0097368 Sms protein_coding protein_coding MGP_CBAJ_T0095325.1 MGP_CBAJ_G0035271.1 mouse_genomes_project X 20204020 20205253 - MGP_CBAJ_P0095325 Gm4985 protein_coding protein_coding MGP_CBAJ_T0009284.1 MGP_CBAJ_G0007445.1 mouse_genomes_project X 81478796 81481240 - Gm26775 lincRNA lincRNA MGP_CBAJ_T0095633.1 MGP_CBAJ_G0035383.1 mouse_genomes_project X 54745199 54747191 + MGP_CBAJ_P0095633 Gm10477 protein_coding protein_coding MGP_CBAJ_T0097456.1 MGP_CBAJ_G0035879.1 mouse_genomes_project X 168214398 168219335 - MGP_CBAJ_P0097456 Gja6 protein_coding protein_coding MGP_CBAJ_T0002444.1 MGP_CBAJ_G0002356.1 mouse_genomes_project X 139911685 139913111 - TEC TEC MGP_CBAJ_T0015977.1 MGP_CBAJ_G0014089.1 mouse_genomes_project X 8080659 8080767 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099722.1 MGP_CBAJ_G0037977.1 mouse_genomes_project X 170721666 170721773 - Gm22746 snRNA snRNA MGP_CBAJ_T0102255.1 MGP_CBAJ_G0040284.1 mouse_genomes_project X 87260975 87262454 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099668.1 MGP_CBAJ_G0037923.1 mouse_genomes_project X 45639476 45639635 + Gm24038 snRNA snRNA MGP_CBAJ_T0016401.1 MGP_CBAJ_G0014513.1 mouse_genomes_project X 115291030 115291579 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095573.1 MGP_CBAJ_G0035355.1 mouse_genomes_project X 48385346 48437918 + MGP_CBAJ_P0095573 Stk26 protein_coding protein_coding MGP_CBAJ_T0095574.1 MGP_CBAJ_G0035355.1 mouse_genomes_project X 48385740 48424889 + Stk26 protein_coding retained_intron MGP_CBAJ_T0095575.1 MGP_CBAJ_G0035355.1 mouse_genomes_project X 48385740 48437918 + MGP_CBAJ_P0095575 Stk26 protein_coding protein_coding MGP_CBAJ_T0095576.1 MGP_CBAJ_G0035355.1 mouse_genomes_project X 48423202 48436667 + Stk26 protein_coding retained_intron MGP_CBAJ_T0016300.1 MGP_CBAJ_G0014412.1 mouse_genomes_project X 97273177 97274160 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016667.1 MGP_CBAJ_G0014779.1 mouse_genomes_project X 175753115 175754411 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016475.1 MGP_CBAJ_G0014587.1 mouse_genomes_project X 135733394 135734788 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016185.1 MGP_CBAJ_G0014297.1 mouse_genomes_project X 74498168 74498556 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016425.1 MGP_CBAJ_G0014537.1 mouse_genomes_project X 119131040 119131670 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016522.1 MGP_CBAJ_G0014634.1 mouse_genomes_project X 145576784 145580299 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016625.1 MGP_CBAJ_G0014737.1 mouse_genomes_project X 165983714 165984599 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096366.1 MGP_CBAJ_G0035573.1 mouse_genomes_project X 97782603 98047066 + Zc3h12b protein_coding processed_transcript MGP_CBAJ_T0096368.1 MGP_CBAJ_G0035573.1 mouse_genomes_project X 98015703 98050278 + MGP_CBAJ_P0096368 Zc3h12b protein_coding protein_coding MGP_CBAJ_T0096369.1 MGP_CBAJ_G0035573.1 mouse_genomes_project X 98016509 98054945 + MGP_CBAJ_P0096369 Zc3h12b protein_coding nonsense_mediated_decay MGP_CBAJ_T0016246.1 MGP_CBAJ_G0014358.1 mouse_genomes_project X 88925261 88926269 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009289.1 MGP_CBAJ_G0007449.1 mouse_genomes_project X 96325019 96330123 + Gm14827 lincRNA lincRNA MGP_CBAJ_T0099713.1 MGP_CBAJ_G0037968.1 mouse_genomes_project X 157766801 157766905 - Gm26441 snRNA snRNA MGP_CBAJ_T0016211.1 MGP_CBAJ_G0014323.1 mouse_genomes_project X 78626080 78629727 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016180.1 MGP_CBAJ_G0014292.1 mouse_genomes_project X 73221799 73224078 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010999.1 MGP_CBAJ_G0009137.1 mouse_genomes_project X 20228378 20228480 + Gm25299 miRNA miRNA MGP_CBAJ_T0015969.1 MGP_CBAJ_G0014081.1 mouse_genomes_project X 6899944 6900160 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011657.1 MGP_CBAJ_G0009795.1 mouse_genomes_project X 170177255 170177556 + Gm22257 misc_RNA misc_RNA MGP_CBAJ_T0016574.1 MGP_CBAJ_G0014686.1 mouse_genomes_project X 152745741 152746215 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016598.1 MGP_CBAJ_G0014710.1 mouse_genomes_project X 160209298 160209683 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018427.1 MGP_CBAJ_G0015536.1 mouse_genomes_project X 177390327 177445440 + Gm15246 processed_transcript processed_transcript MGP_CBAJ_T0018428.1 MGP_CBAJ_G0015536.1 mouse_genomes_project X 177390327 177435972 + Gm15246 processed_transcript processed_transcript MGP_CBAJ_T0011046.1 MGP_CBAJ_G0009184.1 mouse_genomes_project X 67341624 67341690 - Mir201 miRNA miRNA MGP_CBAJ_T0097110.1 MGP_CBAJ_G0035808.1 mouse_genomes_project X 149593813 149877799 + MGP_CBAJ_P0097110 Pak3 protein_coding protein_coding MGP_CBAJ_T0097111.1 MGP_CBAJ_G0035808.1 mouse_genomes_project X 149593920 149850213 + MGP_CBAJ_P0097111 Pak3 protein_coding protein_coding MGP_CBAJ_T0097112.1 MGP_CBAJ_G0035808.1 mouse_genomes_project X 149742266 149877799 + MGP_CBAJ_P0097112 Pak3 protein_coding protein_coding MGP_CBAJ_T0097113.1 MGP_CBAJ_G0035808.1 mouse_genomes_project X 149742349 149780835 + MGP_CBAJ_P0097113 Pak3 protein_coding protein_coding MGP_CBAJ_T0097114.1 MGP_CBAJ_G0035808.1 mouse_genomes_project X 149742367 149803465 + MGP_CBAJ_P0097114 Pak3 protein_coding protein_coding MGP_CBAJ_T0097115.1 MGP_CBAJ_G0035808.1 mouse_genomes_project X 149742502 149821696 + MGP_CBAJ_P0097115 Pak3 protein_coding protein_coding MGP_CBAJ_T0097116.1 MGP_CBAJ_G0035808.1 mouse_genomes_project X 149742555 149877799 + MGP_CBAJ_P0097116 Pak3 protein_coding protein_coding MGP_CBAJ_T0097117.1 MGP_CBAJ_G0035808.1 mouse_genomes_project X 149743720 149877799 + MGP_CBAJ_P0097117 Pak3 protein_coding protein_coding MGP_CBAJ_T0097118.1 MGP_CBAJ_G0035808.1 mouse_genomes_project X 149743720 149877799 + MGP_CBAJ_P0097118 Pak3 protein_coding protein_coding MGP_CBAJ_T0097119.1 MGP_CBAJ_G0035808.1 mouse_genomes_project X 149780736 149877803 + MGP_CBAJ_P0097119 Pak3 protein_coding protein_coding MGP_CBAJ_T0016275.1 MGP_CBAJ_G0014387.1 mouse_genomes_project X 93507708 93509861 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016560.1 MGP_CBAJ_G0014672.1 mouse_genomes_project X 150633505 150634636 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095382.1 MGP_CBAJ_G0035294.1 mouse_genomes_project X 33675170 33686185 - MGP_CBAJ_P0095382 Rhox1 protein_coding protein_coding MGP_CBAJ_T0095615.1 MGP_CBAJ_G0035371.1 mouse_genomes_project X 51222025 51230427 + MGP_CBAJ_P0095615 Etd protein_coding protein_coding MGP_CBAJ_T0016085.1 MGP_CBAJ_G0014197.1 mouse_genomes_project X 48824577 48824975 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016019.1 MGP_CBAJ_G0014131.1 mouse_genomes_project X 18497746 18498221 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098136.1 MGP_CBAJ_G0036409.1 mouse_genomes_project X 76969641 76969749 - Gm26041 rRNA rRNA MGP_CBAJ_T0096411.1 MGP_CBAJ_G0035585.1 mouse_genomes_project X 101287885 101297401 + MGP_CBAJ_P0096411 Yipf6 protein_coding protein_coding MGP_CBAJ_T0096412.1 MGP_CBAJ_G0035585.1 mouse_genomes_project X 101288847 101295905 + MGP_CBAJ_P0096412 Yipf6 protein_coding protein_coding MGP_CBAJ_T0096413.1 MGP_CBAJ_G0035585.1 mouse_genomes_project X 101288875 101291456 + MGP_CBAJ_P0096413 Yipf6 protein_coding protein_coding MGP_CBAJ_T0096414.1 MGP_CBAJ_G0035585.1 mouse_genomes_project X 101289335 101297176 + Yipf6 protein_coding retained_intron MGP_CBAJ_T0096415.1 MGP_CBAJ_G0035585.1 mouse_genomes_project X 101289335 101301291 + MGP_CBAJ_P0096415 Yipf6 protein_coding protein_coding MGP_CBAJ_T0096416.1 MGP_CBAJ_G0035585.1 mouse_genomes_project X 101289781 101296305 + Yipf6 protein_coding retained_intron MGP_CBAJ_T0095869.1 MGP_CBAJ_G0035463.1 mouse_genomes_project X 73576535 73605075 + MGP_CBAJ_P0095869 Abcd1 protein_coding protein_coding MGP_CBAJ_T0095870.1 MGP_CBAJ_G0035463.1 mouse_genomes_project X 73576678 73591341 + MGP_CBAJ_P0095870 Abcd1 protein_coding protein_coding MGP_CBAJ_T0096760.1 MGP_CBAJ_G0035685.1 mouse_genomes_project X 115861509 115888892 - MGP_CBAJ_P0096760 Satl1 protein_coding protein_coding MGP_CBAJ_T0096761.1 MGP_CBAJ_G0035685.1 mouse_genomes_project X 115861511 115889849 - MGP_CBAJ_P0096761 Satl1 protein_coding protein_coding MGP_CBAJ_T0015945.1 MGP_CBAJ_G0014057.1 mouse_genomes_project X 2342796 2343091 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011054.1 MGP_CBAJ_G0009192.1 mouse_genomes_project X 72690705 72690771 + Mir2137 miRNA miRNA MGP_CBAJ_T0095384.1 MGP_CBAJ_G0035296.1 mouse_genomes_project X 34159843 34170018 - MGP_CBAJ_P0095384 protein_coding protein_coding MGP_CBAJ_T0102266.1 MGP_CBAJ_G0040295.1 mouse_genomes_project X 105429707 105569857 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0096831.1 MGP_CBAJ_G0035714.1 mouse_genomes_project X 139113503 139141221 + MGP_CBAJ_P0096831 Cstf2 protein_coding protein_coding MGP_CBAJ_T0096832.1 MGP_CBAJ_G0035714.1 mouse_genomes_project X 139113513 139141994 + MGP_CBAJ_P0096832 Cstf2 protein_coding protein_coding MGP_CBAJ_T0096833.1 MGP_CBAJ_G0035714.1 mouse_genomes_project X 139113531 139130171 + MGP_CBAJ_P0096833 Cstf2 protein_coding protein_coding MGP_CBAJ_T0096834.1 MGP_CBAJ_G0035714.1 mouse_genomes_project X 139113627 139115803 + Cstf2 protein_coding processed_transcript MGP_CBAJ_T0096835.1 MGP_CBAJ_G0035714.1 mouse_genomes_project X 139113650 139141994 + Cstf2 protein_coding retained_intron MGP_CBAJ_T0096836.1 MGP_CBAJ_G0035714.1 mouse_genomes_project X 139113650 139116940 + MGP_CBAJ_P0096836 Cstf2 protein_coding protein_coding MGP_CBAJ_T0096837.1 MGP_CBAJ_G0035714.1 mouse_genomes_project X 139116703 139128581 + MGP_CBAJ_P0096837 Cstf2 protein_coding protein_coding MGP_CBAJ_T0096838.1 MGP_CBAJ_G0035714.1 mouse_genomes_project X 139120567 139128618 + MGP_CBAJ_P0096838 Cstf2 protein_coding protein_coding MGP_CBAJ_T0099649.1 MGP_CBAJ_G0037904.1 mouse_genomes_project X 2964299 2964401 + Gm22083 snRNA snRNA MGP_CBAJ_T0016001.1 MGP_CBAJ_G0014113.1 mouse_genomes_project X 14805343 14805960 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101202.1 MGP_CBAJ_G0039360.1 mouse_genomes_project X 2994778 2995598 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0100939.1 MGP_CBAJ_G0039194.1 mouse_genomes_project X 74612933 74613068 + Gm26417 snoRNA snoRNA MGP_CBAJ_T0009333.1 MGP_CBAJ_G0007473.1 mouse_genomes_project X 168663431 168685900 + lincRNA lincRNA MGP_CBAJ_T0096608.1 MGP_CBAJ_G0035634.1 mouse_genomes_project X 106097044 106106238 + MGP_CBAJ_P0096608 Cdx4 protein_coding protein_coding MGP_CBAJ_T0016400.1 MGP_CBAJ_G0014512.1 mouse_genomes_project X 115256493 115257138 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0102244.1 MGP_CBAJ_G0040273.1 mouse_genomes_project X 55997025 55997169 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016305.1 MGP_CBAJ_G0014417.1 mouse_genomes_project X 98552229 98555270 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005531.1 MGP_CBAJ_G0004653.1 mouse_genomes_project X 167779062 167790321 - Gm15241 antisense antisense MGP_CBAJ_T0097074.1 MGP_CBAJ_G0035791.1 mouse_genomes_project X 146805720 146810847 - MGP_CBAJ_P0097074 Tex13 protein_coding protein_coding MGP_CBAJ_T0097075.1 MGP_CBAJ_G0035791.1 mouse_genomes_project X 146806681 146808266 - Tex13 protein_coding retained_intron MGP_CBAJ_T0096969.1 MGP_CBAJ_G0035759.1 mouse_genomes_project X 142316918 142339784 - MGP_CBAJ_P0096969 Glra4 protein_coding protein_coding MGP_CBAJ_T0096970.1 MGP_CBAJ_G0035759.1 mouse_genomes_project X 142326254 142339784 - Glra4 protein_coding retained_intron MGP_CBAJ_T0016459.1 MGP_CBAJ_G0014571.1 mouse_genomes_project X 126803022 126803325 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095597.1 MGP_CBAJ_G0035363.1 mouse_genomes_project X 49956718 50315045 - MGP_CBAJ_P0095597 Gpc3 protein_coding protein_coding MGP_CBAJ_T0095598.1 MGP_CBAJ_G0035363.1 mouse_genomes_project X 50074916 50315074 - MGP_CBAJ_P0095598 Gpc3 protein_coding protein_coding MGP_CBAJ_T0096722.1 MGP_CBAJ_G0035671.1 mouse_genomes_project X 111968192 111969080 - MGP_CBAJ_P0096722 Gm379 protein_coding protein_coding MGP_CBAJ_T0016289.1 MGP_CBAJ_G0014401.1 mouse_genomes_project X 96304951 96305569 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015952.1 MGP_CBAJ_G0014064.1 mouse_genomes_project X 2924399 2924570 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016382.1 MGP_CBAJ_G0014494.1 mouse_genomes_project X 109902031 109902249 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009256.1 MGP_CBAJ_G0007425.1 mouse_genomes_project X 8719903 8721546 - 2010308F09Rik lincRNA lincRNA MGP_CBAJ_T0009257.1 MGP_CBAJ_G0007425.1 mouse_genomes_project X 8719946 8732911 - 2010308F09Rik lincRNA lincRNA MGP_CBAJ_T0096609.1 MGP_CBAJ_G0035635.1 mouse_genomes_project X 106135226 106179251 + MGP_CBAJ_P0096609 Chic1 protein_coding protein_coding MGP_CBAJ_T0016060.1 MGP_CBAJ_G0014172.1 mouse_genomes_project X 40877975 40878610 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016618.1 MGP_CBAJ_G0014730.1 mouse_genomes_project X 164688104 164688537 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096501.1 MGP_CBAJ_G0035609.1 mouse_genomes_project X 103795637 103819073 + MGP_CBAJ_P0096501 Med12 protein_coding protein_coding MGP_CBAJ_T0096502.1 MGP_CBAJ_G0035609.1 mouse_genomes_project X 103795836 103819073 + MGP_CBAJ_P0096502 Med12 protein_coding protein_coding MGP_CBAJ_T0096503.1 MGP_CBAJ_G0035609.1 mouse_genomes_project X 103795867 103819073 + MGP_CBAJ_P0096503 Med12 protein_coding protein_coding MGP_CBAJ_T0096504.1 MGP_CBAJ_G0035609.1 mouse_genomes_project X 103795867 103819073 + MGP_CBAJ_P0096504 Med12 protein_coding protein_coding MGP_CBAJ_T0096505.1 MGP_CBAJ_G0035609.1 mouse_genomes_project X 103804303 103805765 + Med12 protein_coding retained_intron MGP_CBAJ_T0096506.1 MGP_CBAJ_G0035609.1 mouse_genomes_project X 103804793 103805536 + Med12 protein_coding processed_transcript MGP_CBAJ_T0096507.1 MGP_CBAJ_G0035609.1 mouse_genomes_project X 103807631 103819073 + Med12 protein_coding retained_intron MGP_CBAJ_T0096508.1 MGP_CBAJ_G0035609.1 mouse_genomes_project X 103814741 103817675 + Med12 protein_coding processed_transcript MGP_CBAJ_T0096509.1 MGP_CBAJ_G0035609.1 mouse_genomes_project X 103818176 103818995 + Med12 protein_coding processed_transcript MGP_CBAJ_T0016517.1 MGP_CBAJ_G0014629.1 mouse_genomes_project X 144477538 144480187 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095217.1 MGP_CBAJ_G0035239.1 mouse_genomes_project X 13321384 13335136 - Fundc1 protein_coding processed_transcript MGP_CBAJ_T0095218.1 MGP_CBAJ_G0035239.1 mouse_genomes_project X 13321384 13335765 - MGP_CBAJ_P0095218 Fundc1 protein_coding protein_coding MGP_CBAJ_T0095219.1 MGP_CBAJ_G0035239.1 mouse_genomes_project X 13321420 13335814 - MGP_CBAJ_P0095219 Fundc1 protein_coding protein_coding MGP_CBAJ_T0096551.1 MGP_CBAJ_G0035616.1 mouse_genomes_project X 104216470 104267734 + MGP_CBAJ_P0096551 Ogt protein_coding protein_coding MGP_CBAJ_T0096552.1 MGP_CBAJ_G0035616.1 mouse_genomes_project X 104216472 104232065 + Ogt protein_coding retained_intron MGP_CBAJ_T0096553.1 MGP_CBAJ_G0035616.1 mouse_genomes_project X 104216474 104269145 + MGP_CBAJ_P0096553 Ogt protein_coding protein_coding MGP_CBAJ_T0096554.1 MGP_CBAJ_G0035616.1 mouse_genomes_project X 104216504 104233506 + Ogt protein_coding processed_transcript MGP_CBAJ_T0096555.1 MGP_CBAJ_G0035616.1 mouse_genomes_project X 104216518 104233774 + Ogt protein_coding retained_intron MGP_CBAJ_T0096556.1 MGP_CBAJ_G0035616.1 mouse_genomes_project X 104216550 104232082 + Ogt protein_coding retained_intron MGP_CBAJ_T0096557.1 MGP_CBAJ_G0035616.1 mouse_genomes_project X 104234532 104267952 + Ogt protein_coding processed_transcript MGP_CBAJ_T0097200.1 MGP_CBAJ_G0035823.1 mouse_genomes_project X 157102138 157114050 - MGP_CBAJ_P0097200 Tro protein_coding protein_coding MGP_CBAJ_T0097201.1 MGP_CBAJ_G0035823.1 mouse_genomes_project X 157102138 157113903 - MGP_CBAJ_P0097201 Tro protein_coding protein_coding MGP_CBAJ_T0097202.1 MGP_CBAJ_G0035823.1 mouse_genomes_project X 157102142 157113866 - MGP_CBAJ_P0097202 Tro protein_coding protein_coding MGP_CBAJ_T0097203.1 MGP_CBAJ_G0035823.1 mouse_genomes_project X 157102142 157113866 - MGP_CBAJ_P0097203 Tro protein_coding protein_coding MGP_CBAJ_T0097204.1 MGP_CBAJ_G0035823.1 mouse_genomes_project X 157102142 157113903 - MGP_CBAJ_P0097204 Tro protein_coding protein_coding MGP_CBAJ_T0097205.1 MGP_CBAJ_G0035823.1 mouse_genomes_project X 157102260 157112595 - MGP_CBAJ_P0097205 Tro protein_coding protein_coding MGP_CBAJ_T0097206.1 MGP_CBAJ_G0035823.1 mouse_genomes_project X 157105936 157108296 - Tro protein_coding retained_intron MGP_CBAJ_T0097207.1 MGP_CBAJ_G0035823.1 mouse_genomes_project X 157106089 157113866 - MGP_CBAJ_P0097207 Tro protein_coding nonsense_mediated_decay MGP_CBAJ_T0097208.1 MGP_CBAJ_G0035823.1 mouse_genomes_project X 157106213 157108345 - Tro protein_coding retained_intron MGP_CBAJ_T0097209.1 MGP_CBAJ_G0035823.1 mouse_genomes_project X 157107929 157109472 - Tro protein_coding retained_intron MGP_CBAJ_T0016437.1 MGP_CBAJ_G0014549.1 mouse_genomes_project X 121650027 121652037 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096847.1 MGP_CBAJ_G0035718.1 mouse_genomes_project X 139303193 139367942 - MGP_CBAJ_P0096847 Trmt2b protein_coding nonsense_mediated_decay MGP_CBAJ_T0096848.1 MGP_CBAJ_G0035718.1 mouse_genomes_project X 139303949 139367942 - MGP_CBAJ_P0096848 Trmt2b protein_coding protein_coding MGP_CBAJ_T0096849.1 MGP_CBAJ_G0035718.1 mouse_genomes_project X 139303950 139367887 - Trmt2b protein_coding retained_intron MGP_CBAJ_T0096850.1 MGP_CBAJ_G0035718.1 mouse_genomes_project X 139303954 139367880 - MGP_CBAJ_P0096850 Trmt2b protein_coding protein_coding MGP_CBAJ_T0096851.1 MGP_CBAJ_G0035718.1 mouse_genomes_project X 139348621 139367944 - MGP_CBAJ_P0096851 Trmt2b protein_coding protein_coding MGP_CBAJ_T0095623.1 MGP_CBAJ_G0035379.1 mouse_genomes_project X 54534219 54555220 + MGP_CBAJ_P0095623 Zfp449 protein_coding protein_coding MGP_CBAJ_T0016486.1 MGP_CBAJ_G0014598.1 mouse_genomes_project X 139106257 139107886 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016335.1 MGP_CBAJ_G0014447.1 mouse_genomes_project X 105372319 105372913 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095134.1 MGP_CBAJ_G0035214.1 mouse_genomes_project X 5035914 5036495 + MGP_CBAJ_P0095134 Hypm protein_coding protein_coding MGP_CBAJ_T0096464.1 MGP_CBAJ_G0035600.1 mouse_genomes_project X 103203573 103206148 + Gdpd2 protein_coding processed_transcript MGP_CBAJ_T0096465.1 MGP_CBAJ_G0035600.1 mouse_genomes_project X 103203638 103208912 + Gdpd2 protein_coding retained_intron MGP_CBAJ_T0096466.1 MGP_CBAJ_G0035600.1 mouse_genomes_project X 103203642 103212593 + MGP_CBAJ_P0096466 Gdpd2 protein_coding protein_coding MGP_CBAJ_T0096467.1 MGP_CBAJ_G0035600.1 mouse_genomes_project X 103203886 103212593 + MGP_CBAJ_P0096467 Gdpd2 protein_coding protein_coding MGP_CBAJ_T0096468.1 MGP_CBAJ_G0035600.1 mouse_genomes_project X 103210038 103212594 + Gdpd2 protein_coding retained_intron MGP_CBAJ_T0016293.1 MGP_CBAJ_G0014405.1 mouse_genomes_project X 96513736 96514062 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095819.1 MGP_CBAJ_G0035445.1 mouse_genomes_project X 72617476 72646572 + MGP_CBAJ_P0095819 Nsdhl protein_coding protein_coding MGP_CBAJ_T0095820.1 MGP_CBAJ_G0035445.1 mouse_genomes_project X 72628598 72641710 + Nsdhl protein_coding retained_intron MGP_CBAJ_T0016407.1 MGP_CBAJ_G0014519.1 mouse_genomes_project X 116268095 116268258 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097863.1 MGP_CBAJ_G0036136.1 mouse_genomes_project X 48824431 48825538 - pseudogene pseudogene MGP_CBAJ_T0016415.1 MGP_CBAJ_G0014527.1 mouse_genomes_project X 117641202 117642770 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096667.1 MGP_CBAJ_G0035653.1 mouse_genomes_project X 109066088 109171542 + MGP_CBAJ_P0096667 Atp7a protein_coding protein_coding MGP_CBAJ_T0096668.1 MGP_CBAJ_G0035653.1 mouse_genomes_project X 109066134 109171548 + MGP_CBAJ_P0096668 Atp7a protein_coding protein_coding MGP_CBAJ_T0096669.1 MGP_CBAJ_G0035653.1 mouse_genomes_project X 109151585 109163438 + Atp7a protein_coding processed_transcript MGP_CBAJ_T0096670.1 MGP_CBAJ_G0035653.1 mouse_genomes_project X 109160366 109169027 + Atp7a protein_coding retained_intron MGP_CBAJ_T0016053.1 MGP_CBAJ_G0014165.1 mouse_genomes_project X 39013797 39016324 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095871.1 MGP_CBAJ_G0035464.1 mouse_genomes_project X 73641872 73657302 + Plxnb3 protein_coding retained_intron MGP_CBAJ_T0095872.1 MGP_CBAJ_G0035464.1 mouse_genomes_project X 73641872 73657302 + Plxnb3 protein_coding retained_intron MGP_CBAJ_T0095873.1 MGP_CBAJ_G0035464.1 mouse_genomes_project X 73641872 73657302 + Plxnb3 protein_coding retained_intron MGP_CBAJ_T0095874.1 MGP_CBAJ_G0035464.1 mouse_genomes_project X 73641881 73657302 + MGP_CBAJ_P0095874 Plxnb3 protein_coding protein_coding MGP_CBAJ_T0095875.1 MGP_CBAJ_G0035464.1 mouse_genomes_project X 73650319 73654453 + Plxnb3 protein_coding retained_intron MGP_CBAJ_T0097012.1 MGP_CBAJ_G0035773.1 mouse_genomes_project X 144863314 144870473 + MGP_CBAJ_P0097012 4930513O06Rik protein_coding protein_coding MGP_CBAJ_T0016349.1 MGP_CBAJ_G0014461.1 mouse_genomes_project X 106288941 106289342 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011031.1 MGP_CBAJ_G0009169.1 mouse_genomes_project X 66007704 66007769 - Mir742 miRNA miRNA MGP_CBAJ_T0099670.1 MGP_CBAJ_G0037925.1 mouse_genomes_project X 45729862 45729963 + Gm22612 snRNA snRNA MGP_CBAJ_T0100925.1 MGP_CBAJ_G0039180.1 mouse_genomes_project X 33181608 33181695 + Gm23613 snoRNA snoRNA MGP_CBAJ_T0016225.1 MGP_CBAJ_G0014337.1 mouse_genomes_project X 81348776 81348909 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016468.1 MGP_CBAJ_G0014580.1 mouse_genomes_project X 134122081 134123083 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016023.1 MGP_CBAJ_G0014135.1 mouse_genomes_project X 20066744 20067960 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099662.1 MGP_CBAJ_G0037917.1 mouse_genomes_project X 32760853 32760957 + Gm25047 snRNA snRNA MGP_CBAJ_T0016653.1 MGP_CBAJ_G0014765.1 mouse_genomes_project X 171627405 171627581 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016058.1 MGP_CBAJ_G0014170.1 mouse_genomes_project X 40619507 40619790 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101213.1 MGP_CBAJ_G0039367.1 mouse_genomes_project X 72568117 72569016 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101214.1 MGP_CBAJ_G0039367.1 mouse_genomes_project X 72568117 72568849 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0097373.1 MGP_CBAJ_G0035863.1 mouse_genomes_project X 164629338 164632205 - MGP_CBAJ_P0097373 Yy2 protein_coding protein_coding MGP_CBAJ_T0016080.1 MGP_CBAJ_G0014192.1 mouse_genomes_project X 48084534 48084917 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096881.1 MGP_CBAJ_G0035727.1 mouse_genomes_project X 139728011 139740971 - MGP_CBAJ_P0096881 Gla protein_coding protein_coding MGP_CBAJ_T0096882.1 MGP_CBAJ_G0035727.1 mouse_genomes_project X 139735135 139740138 - MGP_CBAJ_P0096882 Gla protein_coding protein_coding MGP_CBAJ_T0102279.1 MGP_CBAJ_G0040308.1 mouse_genomes_project X 160968152 160970422 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016210.1 MGP_CBAJ_G0014322.1 mouse_genomes_project X 78607958 78608478 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095563.1 MGP_CBAJ_G0035349.1 mouse_genomes_project X 47184338 47185298 + MGP_CBAJ_P0095563 Olfr1320 protein_coding protein_coding MGP_CBAJ_T0011656.1 MGP_CBAJ_G0009794.1 mouse_genomes_project X 169750462 169750736 - Gm23867 misc_RNA misc_RNA MGP_CBAJ_T0096978.1 MGP_CBAJ_G0035764.1 mouse_genomes_project X 142569912 142635570 - MGP_CBAJ_P0096978 Slc25a53 protein_coding protein_coding MGP_CBAJ_T0096979.1 MGP_CBAJ_G0035764.1 mouse_genomes_project X 142569918 142635548 - MGP_CBAJ_P0096979 Slc25a53 protein_coding protein_coding MGP_CBAJ_T0096980.1 MGP_CBAJ_G0035764.1 mouse_genomes_project X 142569918 142584507 - MGP_CBAJ_P0096980 Slc25a53 protein_coding protein_coding MGP_CBAJ_T0096981.1 MGP_CBAJ_G0035764.1 mouse_genomes_project X 142571646 142584532 - MGP_CBAJ_P0096981 Slc25a53 protein_coding protein_coding MGP_CBAJ_T0096982.1 MGP_CBAJ_G0035764.1 mouse_genomes_project X 142571788 142584564 - MGP_CBAJ_P0096982 Slc25a53 protein_coding protein_coding MGP_CBAJ_T0096987.1 MGP_CBAJ_G0035764.1 mouse_genomes_project X 142592500 142627394 - Slc25a53 protein_coding retained_intron MGP_CBAJ_T0096988.1 MGP_CBAJ_G0035764.1 mouse_genomes_project X 142592539 142635572 - Slc25a53 protein_coding processed_transcript MGP_CBAJ_T0096989.1 MGP_CBAJ_G0035764.1 mouse_genomes_project X 142594273 142635302 - Slc25a53 protein_coding processed_transcript MGP_CBAJ_T0096990.1 MGP_CBAJ_G0035764.1 mouse_genomes_project X 142594274 142635542 - Slc25a53 protein_coding processed_transcript MGP_CBAJ_T0096991.1 MGP_CBAJ_G0035764.1 mouse_genomes_project X 142595042 142611522 - Slc25a53 protein_coding processed_transcript MGP_CBAJ_T0096992.1 MGP_CBAJ_G0035764.1 mouse_genomes_project X 142609042 142635569 - Slc25a53 protein_coding processed_transcript MGP_CBAJ_T0096993.1 MGP_CBAJ_G0035764.1 mouse_genomes_project X 142627316 142635294 - Slc25a53 protein_coding processed_transcript MGP_CBAJ_T0096994.1 MGP_CBAJ_G0035764.1 mouse_genomes_project X 142629105 142635572 - Slc25a53 protein_coding retained_intron MGP_CBAJ_T0096995.1 MGP_CBAJ_G0035764.1 mouse_genomes_project X 142629712 142635278 - Slc25a53 protein_coding processed_transcript MGP_CBAJ_T0096686.1 MGP_CBAJ_G0035659.1 mouse_genomes_project X 109722477 109753707 - MGP_CBAJ_P0096686 Cysltr1 protein_coding protein_coding MGP_CBAJ_T0096687.1 MGP_CBAJ_G0035659.1 mouse_genomes_project X 109726045 109729087 - MGP_CBAJ_P0096687 Cysltr1 protein_coding protein_coding MGP_CBAJ_T0016120.1 MGP_CBAJ_G0014232.1 mouse_genomes_project X 59205344 59205786 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0094909.1 MGP_CBAJ_G0035153.1 mouse_genomes_project X 757194 764852 + MGP_CBAJ_P0094909 Nudt11 protein_coding protein_coding MGP_CBAJ_T0009282.1 MGP_CBAJ_G0007443.1 mouse_genomes_project X 72680300 72680822 + Gm14684 lincRNA lincRNA MGP_CBAJ_T0016596.1 MGP_CBAJ_G0014708.1 mouse_genomes_project X 159891741 159892015 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016228.1 MGP_CBAJ_G0014340.1 mouse_genomes_project X 82957395 82958545 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016566.1 MGP_CBAJ_G0014678.1 mouse_genomes_project X 151792657 151793605 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0018334.1 MGP_CBAJ_G0015505.1 mouse_genomes_project X 2150940 2153058 + Gm14379 processed_transcript processed_transcript MGP_CBAJ_T0095395.1 MGP_CBAJ_G0035305.1 mouse_genomes_project X 34574290 34587746 + MGP_CBAJ_P0095395 Rhox10 protein_coding protein_coding MGP_CBAJ_T0016488.1 MGP_CBAJ_G0014600.1 mouse_genomes_project X 139838127 139838485 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095312.1 MGP_CBAJ_G0035266.1 mouse_genomes_project X 17874521 17901798 + MGP_CBAJ_P0095312 Slc6a14 protein_coding protein_coding MGP_CBAJ_T0097340.1 MGP_CBAJ_G0035852.1 mouse_genomes_project X 161077622 161081790 - MGP_CBAJ_P0097340 4930524N10Rik protein_coding protein_coding MGP_CBAJ_T0095381.1 MGP_CBAJ_G0035293.1 mouse_genomes_project X 33670714 33672408 - MGP_CBAJ_P0095381 Gm9 protein_coding protein_coding MGP_CBAJ_T0016512.1 MGP_CBAJ_G0014624.1 mouse_genomes_project X 142741966 142742710 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097210.1 MGP_CBAJ_G0035824.1 mouse_genomes_project X 157244049 157252023 - MGP_CBAJ_P0097210 Maged2 protein_coding protein_coding MGP_CBAJ_T0097211.1 MGP_CBAJ_G0035824.1 mouse_genomes_project X 157244100 157250646 - Maged2 protein_coding retained_intron MGP_CBAJ_T0097212.1 MGP_CBAJ_G0035824.1 mouse_genomes_project X 157244100 157251385 - MGP_CBAJ_P0097212 Maged2 protein_coding protein_coding MGP_CBAJ_T0097213.1 MGP_CBAJ_G0035824.1 mouse_genomes_project X 157244103 157251947 - MGP_CBAJ_P0097213 Maged2 protein_coding protein_coding MGP_CBAJ_T0097214.1 MGP_CBAJ_G0035824.1 mouse_genomes_project X 157244396 157250393 - MGP_CBAJ_P0097214 Maged2 protein_coding protein_coding MGP_CBAJ_T0097215.1 MGP_CBAJ_G0035824.1 mouse_genomes_project X 157248553 157250756 - MGP_CBAJ_P0097215 Maged2 protein_coding protein_coding MGP_CBAJ_T0097216.1 MGP_CBAJ_G0035824.1 mouse_genomes_project X 157248570 157250832 - MGP_CBAJ_P0097216 Maged2 protein_coding protein_coding MGP_CBAJ_T0097217.1 MGP_CBAJ_G0035824.1 mouse_genomes_project X 157248779 157250141 - Maged2 protein_coding processed_transcript MGP_CBAJ_T0097218.1 MGP_CBAJ_G0035824.1 mouse_genomes_project X 157248817 157251959 - MGP_CBAJ_P0097218 Maged2 protein_coding protein_coding MGP_CBAJ_T0097219.1 MGP_CBAJ_G0035824.1 mouse_genomes_project X 157249554 157250636 - MGP_CBAJ_P0097219 Maged2 protein_coding protein_coding MGP_CBAJ_T0095840.1 MGP_CBAJ_G0035457.1 mouse_genomes_project X 73309572 73321512 + Bgn protein_coding processed_transcript MGP_CBAJ_T0095841.1 MGP_CBAJ_G0035457.1 mouse_genomes_project X 73309572 73324689 + MGP_CBAJ_P0095841 Bgn protein_coding protein_coding MGP_CBAJ_T0095842.1 MGP_CBAJ_G0035457.1 mouse_genomes_project X 73309593 73321164 + Bgn protein_coding retained_intron MGP_CBAJ_T0095843.1 MGP_CBAJ_G0035457.1 mouse_genomes_project X 73309603 73312268 + Bgn protein_coding retained_intron MGP_CBAJ_T0095844.1 MGP_CBAJ_G0035457.1 mouse_genomes_project X 73309605 73324685 + MGP_CBAJ_P0095844 Bgn protein_coding protein_coding MGP_CBAJ_T0095845.1 MGP_CBAJ_G0035457.1 mouse_genomes_project X 73309609 73321148 + Bgn protein_coding retained_intron MGP_CBAJ_T0095846.1 MGP_CBAJ_G0035457.1 mouse_genomes_project X 73320822 73322076 + Bgn protein_coding processed_transcript MGP_CBAJ_T0095847.1 MGP_CBAJ_G0035457.1 mouse_genomes_project X 73323657 73324682 + Bgn protein_coding processed_transcript MGP_CBAJ_T0101212.1 MGP_CBAJ_G0039366.1 mouse_genomes_project X 61736228 61738196 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0016392.1 MGP_CBAJ_G0014504.1 mouse_genomes_project X 112208343 112208499 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098221.1 MGP_CBAJ_G0036494.1 mouse_genomes_project X 119098438 119098819 + Gm27414 scaRNA scaRNA MGP_CBAJ_T0009253.1 MGP_CBAJ_G0007423.1 mouse_genomes_project X 5969466 5979403 - Gm10489 lincRNA lincRNA MGP_CBAJ_T0016015.1 MGP_CBAJ_G0014127.1 mouse_genomes_project X 17640183 17641483 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095486.1 MGP_CBAJ_G0035327.1 mouse_genomes_project X 41480787 41483672 - MGP_CBAJ_P0095486 Dcaf12l2 protein_coding protein_coding MGP_CBAJ_T0097623.1 MGP_CBAJ_G0035922.1 mouse_genomes_project X 177322521 177390078 - MGP_CBAJ_P0097623 Hccs protein_coding nonsense_mediated_decay MGP_CBAJ_T0097624.1 MGP_CBAJ_G0035922.1 mouse_genomes_project X 177381235 177389986 - MGP_CBAJ_P0097624 Hccs protein_coding protein_coding MGP_CBAJ_T0097625.1 MGP_CBAJ_G0035922.1 mouse_genomes_project X 177381235 177390000 - MGP_CBAJ_P0097625 Hccs protein_coding protein_coding MGP_CBAJ_T0096400.1 MGP_CBAJ_G0035583.1 mouse_genomes_project X 100460336 100628022 + MGP_CBAJ_P0096400 Ar protein_coding protein_coding MGP_CBAJ_T0016069.1 MGP_CBAJ_G0014181.1 mouse_genomes_project X 43737011 43737419 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0094908.1 MGP_CBAJ_G0035152.1 mouse_genomes_project X 62049 64417 - MGP_CBAJ_P0094908 Mycs protein_coding protein_coding MGP_CBAJ_T0095050.1 MGP_CBAJ_G0035187.1 mouse_genomes_project X 2769248 2789347 - MGP_CBAJ_P0095050 Hdac6 protein_coding protein_coding MGP_CBAJ_T0095051.1 MGP_CBAJ_G0035187.1 mouse_genomes_project X 2769250 2789347 - MGP_CBAJ_P0095051 Hdac6 protein_coding protein_coding MGP_CBAJ_T0095052.1 MGP_CBAJ_G0035187.1 mouse_genomes_project X 2769252 2789296 - Hdac6 protein_coding retained_intron MGP_CBAJ_T0095053.1 MGP_CBAJ_G0035187.1 mouse_genomes_project X 2770487 2789347 - MGP_CBAJ_P0095053 Hdac6 protein_coding protein_coding MGP_CBAJ_T0095054.1 MGP_CBAJ_G0035187.1 mouse_genomes_project X 2770683 2773614 - Hdac6 protein_coding retained_intron MGP_CBAJ_T0095055.1 MGP_CBAJ_G0035187.1 mouse_genomes_project X 2778803 2780154 - Hdac6 protein_coding retained_intron MGP_CBAJ_T0095056.1 MGP_CBAJ_G0035187.1 mouse_genomes_project X 2778910 2781446 - Hdac6 protein_coding retained_intron MGP_CBAJ_T0095057.1 MGP_CBAJ_G0035187.1 mouse_genomes_project X 2784858 2788617 - Hdac6 protein_coding retained_intron MGP_CBAJ_T0095058.1 MGP_CBAJ_G0035187.1 mouse_genomes_project X 2784882 2789011 - MGP_CBAJ_P0095058 Hdac6 protein_coding protein_coding MGP_CBAJ_T0095059.1 MGP_CBAJ_G0035187.1 mouse_genomes_project X 2788453 2789225 - MGP_CBAJ_P0095059 Hdac6 protein_coding protein_coding MGP_CBAJ_T0095716.1 MGP_CBAJ_G0035411.1 mouse_genomes_project X 63179751 63184982 + MGP_CBAJ_P0095716 3830417A13Rik protein_coding protein_coding MGP_CBAJ_T0095717.1 MGP_CBAJ_G0035411.1 mouse_genomes_project X 63180551 63183711 + MGP_CBAJ_P0095717 3830417A13Rik protein_coding protein_coding MGP_CBAJ_T0095541.1 MGP_CBAJ_G0035343.1 mouse_genomes_project X 46082938 46090563 + Slc25a14 protein_coding processed_transcript MGP_CBAJ_T0095542.1 MGP_CBAJ_G0035343.1 mouse_genomes_project X 46083103 46130310 + MGP_CBAJ_P0095542 Slc25a14 protein_coding protein_coding MGP_CBAJ_T0095543.1 MGP_CBAJ_G0035343.1 mouse_genomes_project X 46083103 46130310 + MGP_CBAJ_P0095543 Slc25a14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0095544.1 MGP_CBAJ_G0035343.1 mouse_genomes_project X 46083103 46130310 + MGP_CBAJ_P0095544 Slc25a14 protein_coding protein_coding MGP_CBAJ_T0095545.1 MGP_CBAJ_G0035343.1 mouse_genomes_project X 46083274 46117501 + Slc25a14 protein_coding processed_transcript MGP_CBAJ_T0095546.1 MGP_CBAJ_G0035343.1 mouse_genomes_project X 46083290 46130310 + MGP_CBAJ_P0095546 Slc25a14 protein_coding protein_coding MGP_CBAJ_T0095547.1 MGP_CBAJ_G0035343.1 mouse_genomes_project X 46083345 46094795 + Slc25a14 protein_coding retained_intron MGP_CBAJ_T0095548.1 MGP_CBAJ_G0035343.1 mouse_genomes_project X 46083487 46130308 + MGP_CBAJ_P0095548 Slc25a14 protein_coding protein_coding MGP_CBAJ_T0095636.1 MGP_CBAJ_G0035386.1 mouse_genomes_project X 54842883 54871102 + MGP_CBAJ_P0095636 Slc9a6 protein_coding protein_coding MGP_CBAJ_T0095637.1 MGP_CBAJ_G0035386.1 mouse_genomes_project X 54842901 54902774 + MGP_CBAJ_P0095637 Slc9a6 protein_coding protein_coding MGP_CBAJ_T0095638.1 MGP_CBAJ_G0035386.1 mouse_genomes_project X 54842943 54902385 + MGP_CBAJ_P0095638 Slc9a6 protein_coding protein_coding MGP_CBAJ_T0095639.1 MGP_CBAJ_G0035386.1 mouse_genomes_project X 54896788 54902373 + Slc9a6 protein_coding retained_intron MGP_CBAJ_T0015990.1 MGP_CBAJ_G0014102.1 mouse_genomes_project X 11183160 11183497 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0102262.1 MGP_CBAJ_G0040291.1 mouse_genomes_project X 93742618 93743662 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099685.1 MGP_CBAJ_G0037940.1 mouse_genomes_project X 94613242 94613347 + Gm25332 snRNA snRNA MGP_CBAJ_T0016471.1 MGP_CBAJ_G0014583.1 mouse_genomes_project X 135093359 135094619 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016006.1 MGP_CBAJ_G0014118.1 mouse_genomes_project X 15856862 15857325 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099675.1 MGP_CBAJ_G0037930.1 mouse_genomes_project X 57645358 57645452 + Gm26487 snRNA snRNA MGP_CBAJ_T0096607.1 MGP_CBAJ_G0035633.1 mouse_genomes_project X 105939945 105942410 - MGP_CBAJ_P0096607 Nap1l2 protein_coding protein_coding MGP_CBAJ_T0099725.1 MGP_CBAJ_G0037980.1 mouse_genomes_project X 173540946 173541053 - Gm22062 snRNA snRNA MGP_CBAJ_T0016387.1 MGP_CBAJ_G0014499.1 mouse_genomes_project X 110463998 110464946 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097179.1 MGP_CBAJ_G0035820.1 mouse_genomes_project X 156981312 157050265 - MGP_CBAJ_P0097179 Apex2 protein_coding protein_coding MGP_CBAJ_T0097180.1 MGP_CBAJ_G0035820.1 mouse_genomes_project X 156982145 157048503 - MGP_CBAJ_P0097180 Apex2 protein_coding protein_coding MGP_CBAJ_T0097185.1 MGP_CBAJ_G0035820.1 mouse_genomes_project X 157029242 157050265 - MGP_CBAJ_P0097185 Apex2 protein_coding protein_coding MGP_CBAJ_T0097186.1 MGP_CBAJ_G0035820.1 mouse_genomes_project X 157031887 157048506 - Apex2 protein_coding retained_intron MGP_CBAJ_T0097187.1 MGP_CBAJ_G0035820.1 mouse_genomes_project X 157031888 157050289 - Apex2 protein_coding processed_transcript MGP_CBAJ_T0097188.1 MGP_CBAJ_G0035820.1 mouse_genomes_project X 157031888 157048517 - MGP_CBAJ_P0097188 Apex2 protein_coding protein_coding MGP_CBAJ_T0097189.1 MGP_CBAJ_G0035820.1 mouse_genomes_project X 157031888 157048570 - MGP_CBAJ_P0097189 Apex2 protein_coding protein_coding MGP_CBAJ_T0097190.1 MGP_CBAJ_G0035820.1 mouse_genomes_project X 157032839 157046621 - Apex2 protein_coding processed_transcript MGP_CBAJ_T0097191.1 MGP_CBAJ_G0035820.1 mouse_genomes_project X 157032929 157048492 - MGP_CBAJ_P0097191 Apex2 protein_coding protein_coding MGP_CBAJ_T0097192.1 MGP_CBAJ_G0035820.1 mouse_genomes_project X 157044550 157048502 - MGP_CBAJ_P0097192 Apex2 protein_coding protein_coding MGP_CBAJ_T0016451.1 MGP_CBAJ_G0014563.1 mouse_genomes_project X 124622263 124622915 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016195.1 MGP_CBAJ_G0014307.1 mouse_genomes_project X 76014806 76016118 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101205.1 MGP_CBAJ_G0039362.1 mouse_genomes_project X 10698401 10699283 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101206.1 MGP_CBAJ_G0039362.1 mouse_genomes_project X 10698648 10699197 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0095313.1 MGP_CBAJ_G0035267.1 mouse_genomes_project X 17902882 17904540 - MGP_CBAJ_P0095313 Gm28269 protein_coding protein_coding MGP_CBAJ_T0095572.1 MGP_CBAJ_G0035354.1 mouse_genomes_project X 47963127 47964126 - MGP_CBAJ_P0095572 Olfr1324 protein_coding protein_coding MGP_CBAJ_T0095807.1 MGP_CBAJ_G0035440.1 mouse_genomes_project X 71931135 71949925 - MGP_CBAJ_P0095807 Gabre protein_coding protein_coding MGP_CBAJ_T0095808.1 MGP_CBAJ_G0035440.1 mouse_genomes_project X 71936506 71944904 - Gabre protein_coding processed_transcript MGP_CBAJ_T0095809.1 MGP_CBAJ_G0035440.1 mouse_genomes_project X 71944108 71949925 - Gabre protein_coding retained_intron MGP_CBAJ_T0097530.1 MGP_CBAJ_G0035899.1 mouse_genomes_project X 172079454 172111844 + MGP_CBAJ_P0097530 Vegfd protein_coding protein_coding MGP_CBAJ_T0097531.1 MGP_CBAJ_G0035899.1 mouse_genomes_project X 172098708 172108251 + Vegfd protein_coding retained_intron MGP_CBAJ_T0016509.1 MGP_CBAJ_G0014621.1 mouse_genomes_project X 142708277 142709111 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015987.1 MGP_CBAJ_G0014099.1 mouse_genomes_project X 9822327 9823193 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011034.1 MGP_CBAJ_G0009172.1 mouse_genomes_project X 66023183 66023250 - Mir471 miRNA miRNA MGP_CBAJ_T0011051.1 MGP_CBAJ_G0009189.1 mouse_genomes_project X 71937363 71937448 - Mir452 miRNA miRNA MGP_CBAJ_T0096953.1 MGP_CBAJ_G0035751.1 mouse_genomes_project X 141648402 141659113 + MGP_CBAJ_P0096953 Tceal7 protein_coding protein_coding MGP_CBAJ_T0096954.1 MGP_CBAJ_G0035751.1 mouse_genomes_project X 141657766 141659826 + MGP_CBAJ_P0096954 Tceal7 protein_coding protein_coding MGP_CBAJ_T0016616.1 MGP_CBAJ_G0014728.1 mouse_genomes_project X 164673688 164673823 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016187.1 MGP_CBAJ_G0014299.1 mouse_genomes_project X 74502993 74503464 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096262.1 MGP_CBAJ_G0035539.1 mouse_genomes_project X 86451530 86491149 + MGP_CBAJ_P0096262 protein_coding protein_coding MGP_CBAJ_T0096263.1 MGP_CBAJ_G0035539.1 mouse_genomes_project X 86451535 86453122 + protein_coding processed_transcript MGP_CBAJ_T0096264.1 MGP_CBAJ_G0035539.1 mouse_genomes_project X 86451646 86490939 + MGP_CBAJ_P0096264 protein_coding protein_coding MGP_CBAJ_T0096265.1 MGP_CBAJ_G0035539.1 mouse_genomes_project X 86451785 86511442 + MGP_CBAJ_P0096265 protein_coding unknown_likely_coding MGP_CBAJ_T0016363.1 MGP_CBAJ_G0014475.1 mouse_genomes_project X 107686968 107689601 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016076.1 MGP_CBAJ_G0014188.1 mouse_genomes_project X 46670037 46670386 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095579.1 MGP_CBAJ_G0035357.1 mouse_genomes_project X 48569806 48583889 - MGP_CBAJ_P0095579 Rap2c protein_coding protein_coding MGP_CBAJ_T0015938.1 MGP_CBAJ_G0014050.1 mouse_genomes_project X 531727 533548 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011643.1 MGP_CBAJ_G0009781.1 mouse_genomes_project X 106446933 106447138 + Gm27321 misc_RNA misc_RNA MGP_CBAJ_T0095177.1 MGP_CBAJ_G0035226.1 mouse_genomes_project X 8539791 8608546 + MGP_CBAJ_P0095177 Usp9x protein_coding protein_coding MGP_CBAJ_T0095178.1 MGP_CBAJ_G0035226.1 mouse_genomes_project X 8539807 8607258 + Usp9x protein_coding retained_intron MGP_CBAJ_T0095179.1 MGP_CBAJ_G0035226.1 mouse_genomes_project X 8539807 8660285 + MGP_CBAJ_P0095179 Usp9x protein_coding protein_coding MGP_CBAJ_T0095180.1 MGP_CBAJ_G0035226.1 mouse_genomes_project X 8592250 8608330 + MGP_CBAJ_P0095180 Usp9x protein_coding protein_coding MGP_CBAJ_T0095181.1 MGP_CBAJ_G0035226.1 mouse_genomes_project X 8614120 8617631 + Usp9x protein_coding retained_intron MGP_CBAJ_T0095182.1 MGP_CBAJ_G0035226.1 mouse_genomes_project X 8614387 8618843 + Usp9x protein_coding retained_intron MGP_CBAJ_T0095183.1 MGP_CBAJ_G0035226.1 mouse_genomes_project X 8645901 8656855 + MGP_CBAJ_P0095183 Usp9x protein_coding protein_coding MGP_CBAJ_T0016346.1 MGP_CBAJ_G0014458.1 mouse_genomes_project X 106094766 106095221 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016422.1 MGP_CBAJ_G0014534.1 mouse_genomes_project X 118606879 118607385 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016549.1 MGP_CBAJ_G0014661.1 mouse_genomes_project X 148567607 148568039 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096785.1 MGP_CBAJ_G0035694.1 mouse_genomes_project X 120260591 120297219 + MGP_CBAJ_P0096785 Cpxcr1 protein_coding protein_coding MGP_CBAJ_T0095064.1 MGP_CBAJ_G0035190.1 mouse_genomes_project X 2941682 2955268 - MGP_CBAJ_P0095064 Suv39h1 protein_coding protein_coding MGP_CBAJ_T0095065.1 MGP_CBAJ_G0035190.1 mouse_genomes_project X 2941937 2955129 - Suv39h1 protein_coding retained_intron MGP_CBAJ_T0095066.1 MGP_CBAJ_G0035190.1 mouse_genomes_project X 2941946 2954766 - MGP_CBAJ_P0095066 Suv39h1 protein_coding protein_coding MGP_CBAJ_T0095067.1 MGP_CBAJ_G0035190.1 mouse_genomes_project X 2947920 2955237 - MGP_CBAJ_P0095067 Suv39h1 protein_coding protein_coding MGP_CBAJ_T0095068.1 MGP_CBAJ_G0035190.1 mouse_genomes_project X 2950940 2954821 - Suv39h1 protein_coding retained_intron MGP_CBAJ_T0011089.1 MGP_CBAJ_G0009227.1 mouse_genomes_project X 153295123 153295228 + Gm22650 miRNA miRNA MGP_CBAJ_T0097079.1 MGP_CBAJ_G0035794.1 mouse_genomes_project X 146972428 147010660 + Atg4a protein_coding processed_transcript MGP_CBAJ_T0097080.1 MGP_CBAJ_G0035794.1 mouse_genomes_project X 146972440 147069782 + MGP_CBAJ_P0097080 Atg4a protein_coding unknown_likely_coding MGP_CBAJ_T0016010.1 MGP_CBAJ_G0014122.1 mouse_genomes_project X 16466893 16467089 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095351.1 MGP_CBAJ_G0035282.1 mouse_genomes_project X 33235140 33284668 - MGP_CBAJ_P0095351 C330007P06Rik protein_coding protein_coding MGP_CBAJ_T0095352.1 MGP_CBAJ_G0035282.1 mouse_genomes_project X 33250823 33275948 - C330007P06Rik protein_coding retained_intron MGP_CBAJ_T0095353.1 MGP_CBAJ_G0035282.1 mouse_genomes_project X 33265221 33284676 - MGP_CBAJ_P0095353 C330007P06Rik protein_coding protein_coding MGP_CBAJ_T0095354.1 MGP_CBAJ_G0035282.1 mouse_genomes_project X 33265228 33294674 - MGP_CBAJ_P0095354 C330007P06Rik protein_coding protein_coding MGP_CBAJ_T0095355.1 MGP_CBAJ_G0035282.1 mouse_genomes_project X 33270051 33284466 - MGP_CBAJ_P0095355 C330007P06Rik protein_coding unknown_likely_coding MGP_CBAJ_T0095356.1 MGP_CBAJ_G0035282.1 mouse_genomes_project X 33275416 33284375 - C330007P06Rik protein_coding retained_intron MGP_CBAJ_T0096221.1 MGP_CBAJ_G0035528.1 mouse_genomes_project X 78464449 78469935 - MGP_CBAJ_P0096221 protein_coding protein_coding MGP_CBAJ_T0096219.1 MGP_CBAJ_G0035526.1 mouse_genomes_project X 78306498 78315203 - MGP_CBAJ_P0096219 Obp1a protein_coding protein_coding MGP_CBAJ_T0096884.1 MGP_CBAJ_G0035729.1 mouse_genomes_project X 139874960 139878865 + MGP_CBAJ_P0096884 Armcx1 protein_coding protein_coding MGP_CBAJ_T0096885.1 MGP_CBAJ_G0035729.1 mouse_genomes_project X 139874967 139878874 + MGP_CBAJ_P0096885 Armcx1 protein_coding protein_coding MGP_CBAJ_T0096886.1 MGP_CBAJ_G0035729.1 mouse_genomes_project X 139874985 139876318 + Armcx1 protein_coding processed_transcript MGP_CBAJ_T0096887.1 MGP_CBAJ_G0035729.1 mouse_genomes_project X 139874985 139878867 + MGP_CBAJ_P0096887 Armcx1 protein_coding protein_coding MGP_CBAJ_T0096888.1 MGP_CBAJ_G0035729.1 mouse_genomes_project X 139874986 139878874 + MGP_CBAJ_P0096888 Armcx1 protein_coding protein_coding MGP_CBAJ_T0096889.1 MGP_CBAJ_G0035729.1 mouse_genomes_project X 139875000 139876512 + Armcx1 protein_coding processed_transcript MGP_CBAJ_T0096890.1 MGP_CBAJ_G0035729.1 mouse_genomes_project X 139875000 139876033 + Armcx1 protein_coding processed_transcript MGP_CBAJ_T0096891.1 MGP_CBAJ_G0035729.1 mouse_genomes_project X 139875010 139878865 + MGP_CBAJ_P0096891 Armcx1 protein_coding protein_coding MGP_CBAJ_T0096892.1 MGP_CBAJ_G0035729.1 mouse_genomes_project X 139875017 139878874 + MGP_CBAJ_P0096892 Armcx1 protein_coding protein_coding MGP_CBAJ_T0096893.1 MGP_CBAJ_G0035729.1 mouse_genomes_project X 139876261 139877472 + Armcx1 protein_coding processed_transcript MGP_CBAJ_T0016310.1 MGP_CBAJ_G0014422.1 mouse_genomes_project X 99298590 99299395 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096144.1 MGP_CBAJ_G0035501.1 mouse_genomes_project X 74985239 74995071 + MGP_CBAJ_P0096144 protein_coding protein_coding MGP_CBAJ_T0016640.1 MGP_CBAJ_G0014752.1 mouse_genomes_project X 169804830 169807111 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015940.1 MGP_CBAJ_G0014052.1 mouse_genomes_project X 783603 784113 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005511.1 MGP_CBAJ_G0004639.1 mouse_genomes_project X 75683114 75684931 + Gm15063 antisense antisense MGP_CBAJ_T0099702.1 MGP_CBAJ_G0037957.1 mouse_genomes_project X 120155160 120155324 + Gm24624 snRNA snRNA MGP_CBAJ_T0016226.1 MGP_CBAJ_G0014338.1 mouse_genomes_project X 81672602 81673332 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016465.1 MGP_CBAJ_G0014577.1 mouse_genomes_project X 131427974 131428338 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016348.1 MGP_CBAJ_G0014460.1 mouse_genomes_project X 106284262 106284717 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096442.1 MGP_CBAJ_G0035592.1 mouse_genomes_project X 102875870 102876743 + MGP_CBAJ_P0096442 Otud6a protein_coding protein_coding MGP_CBAJ_T0016231.1 MGP_CBAJ_G0014343.1 mouse_genomes_project X 84788214 84788646 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096560.1 MGP_CBAJ_G0035619.1 mouse_genomes_project X 104471180 104573488 + Nhsl2 protein_coding processed_transcript MGP_CBAJ_T0096561.1 MGP_CBAJ_G0035619.1 mouse_genomes_project X 104471180 104717637 + MGP_CBAJ_P0096561 Nhsl2 protein_coding protein_coding MGP_CBAJ_T0096562.1 MGP_CBAJ_G0035619.1 mouse_genomes_project X 104471180 104734426 + MGP_CBAJ_P0096562 Nhsl2 protein_coding protein_coding MGP_CBAJ_T0096563.1 MGP_CBAJ_G0035619.1 mouse_genomes_project X 104585649 104719242 + Nhsl2 protein_coding processed_transcript MGP_CBAJ_T0096564.1 MGP_CBAJ_G0035619.1 mouse_genomes_project X 104637410 104719217 + MGP_CBAJ_P0096564 Nhsl2 protein_coding protein_coding MGP_CBAJ_T0096565.1 MGP_CBAJ_G0035619.1 mouse_genomes_project X 104690938 104713327 + Nhsl2 protein_coding processed_transcript MGP_CBAJ_T0096569.1 MGP_CBAJ_G0035619.1 mouse_genomes_project X 104714302 104721661 + Nhsl2 protein_coding processed_transcript MGP_CBAJ_T0016063.1 MGP_CBAJ_G0014175.1 mouse_genomes_project X 41653686 41654026 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016153.1 MGP_CBAJ_G0014265.1 mouse_genomes_project X 66218256 66218776 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011092.1 MGP_CBAJ_G0009230.1 mouse_genomes_project X 153314017 153314103 + Mir1264 miRNA miRNA MGP_CBAJ_T0097337.1 MGP_CBAJ_G0035851.1 mouse_genomes_project X 160547417 160548703 + MGP_CBAJ_P0097337 Spin2c protein_coding protein_coding MGP_CBAJ_T0097338.1 MGP_CBAJ_G0035851.1 mouse_genomes_project X 160547433 160548716 + MGP_CBAJ_P0097338 Spin2c protein_coding protein_coding MGP_CBAJ_T0097339.1 MGP_CBAJ_G0035851.1 mouse_genomes_project X 160547485 160549436 + MGP_CBAJ_P0097339 Spin2c protein_coding protein_coding MGP_CBAJ_T0016657.1 MGP_CBAJ_G0014769.1 mouse_genomes_project X 173867879 173868267 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095153.1 MGP_CBAJ_G0035220.1 mouse_genomes_project X 5726237 5849546 + Tspan7 protein_coding retained_intron MGP_CBAJ_T0095154.1 MGP_CBAJ_G0035220.1 mouse_genomes_project X 5726237 5849546 + MGP_CBAJ_P0095154 Tspan7 protein_coding protein_coding MGP_CBAJ_T0095155.1 MGP_CBAJ_G0035220.1 mouse_genomes_project X 5726237 5849546 + MGP_CBAJ_P0095155 Tspan7 protein_coding protein_coding MGP_CBAJ_T0095120.1 MGP_CBAJ_G0035207.1 mouse_genomes_project X 4185451 4186129 + MGP_CBAJ_P0095120 protein_coding protein_coding MGP_CBAJ_T0016136.1 MGP_CBAJ_G0014248.1 mouse_genomes_project X 61011092 61012192 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009293.1 MGP_CBAJ_G0007453.1 mouse_genomes_project X 101795212 101809244 - Gm14809 lincRNA lincRNA MGP_CBAJ_T0009254.1 MGP_CBAJ_G0007424.1 mouse_genomes_project X 7708535 7723738 - Gm14635 lincRNA lincRNA MGP_CBAJ_T0009255.1 MGP_CBAJ_G0007424.1 mouse_genomes_project X 7709390 7713976 - Gm14635 lincRNA lincRNA MGP_CBAJ_T0095297.1 MGP_CBAJ_G0035260.1 mouse_genomes_project X 17106046 17138900 - MGP_CBAJ_P0095297 Zfp182 protein_coding protein_coding MGP_CBAJ_T0095298.1 MGP_CBAJ_G0035260.1 mouse_genomes_project X 17106050 17138949 - MGP_CBAJ_P0095298 Zfp182 protein_coding protein_coding MGP_CBAJ_T0095299.1 MGP_CBAJ_G0035260.1 mouse_genomes_project X 17106696 17138883 - MGP_CBAJ_P0095299 Zfp182 protein_coding protein_coding MGP_CBAJ_T0095300.1 MGP_CBAJ_G0035260.1 mouse_genomes_project X 17108696 17139213 - Zfp182 protein_coding processed_transcript MGP_CBAJ_T0095301.1 MGP_CBAJ_G0035260.1 mouse_genomes_project X 17134691 17138940 - Zfp182 protein_coding processed_transcript MGP_CBAJ_T0016523.1 MGP_CBAJ_G0014635.1 mouse_genomes_project X 145676706 145676812 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095726.1 MGP_CBAJ_G0035417.1 mouse_genomes_project X 67261736 67263323 - MGP_CBAJ_P0095726 4933436I01Rik protein_coding protein_coding MGP_CBAJ_T0097160.1 MGP_CBAJ_G0035818.1 mouse_genomes_project X 153826358 153872981 - MGP_CBAJ_P0097160 Lrch2 protein_coding protein_coding MGP_CBAJ_T0097161.1 MGP_CBAJ_G0035818.1 mouse_genomes_project X 153826363 153914622 - MGP_CBAJ_P0097161 Lrch2 protein_coding protein_coding MGP_CBAJ_T0097162.1 MGP_CBAJ_G0035818.1 mouse_genomes_project X 153826370 153856001 - Lrch2 protein_coding retained_intron MGP_CBAJ_T0097163.1 MGP_CBAJ_G0035818.1 mouse_genomes_project X 153826370 153914591 - MGP_CBAJ_P0097163 Lrch2 protein_coding protein_coding MGP_CBAJ_T0097164.1 MGP_CBAJ_G0035818.1 mouse_genomes_project X 153828796 153879878 - MGP_CBAJ_P0097164 Lrch2 protein_coding protein_coding MGP_CBAJ_T0097165.1 MGP_CBAJ_G0035818.1 mouse_genomes_project X 153828940 153937858 - MGP_CBAJ_P0097165 Lrch2 protein_coding unknown_likely_coding MGP_CBAJ_T0097166.1 MGP_CBAJ_G0035818.1 mouse_genomes_project X 153842515 153861306 - Lrch2 protein_coding processed_transcript MGP_CBAJ_T0095650.1 MGP_CBAJ_G0035388.1 mouse_genomes_project X 55040763 55068046 - MGP_CBAJ_P0095650 Mtap7d3 protein_coding protein_coding MGP_CBAJ_T0095651.1 MGP_CBAJ_G0035388.1 mouse_genomes_project X 55055402 55068034 - MGP_CBAJ_P0095651 Mtap7d3 protein_coding protein_coding MGP_CBAJ_T0102265.1 MGP_CBAJ_G0040294.1 mouse_genomes_project X 105400266 105401004 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016533.1 MGP_CBAJ_G0014645.1 mouse_genomes_project X 147579048 147579558 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009276.1 MGP_CBAJ_G0007438.1 mouse_genomes_project X 54502426 54505498 + 1600025M17Rik lincRNA lincRNA MGP_CBAJ_T0009277.1 MGP_CBAJ_G0007438.1 mouse_genomes_project X 54502484 54504358 + 1600025M17Rik lincRNA lincRNA MGP_CBAJ_T0016082.1 MGP_CBAJ_G0014194.1 mouse_genomes_project X 48818065 48818502 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095115.1 MGP_CBAJ_G0035202.1 mouse_genomes_project X 3847657 3855078 + MGP_CBAJ_P0095115 protein_coding protein_coding MGP_CBAJ_T0101215.1 MGP_CBAJ_G0039368.1 mouse_genomes_project X 90248770 90249213 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101216.1 MGP_CBAJ_G0039368.1 mouse_genomes_project X 90248823 90249030 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0016081.1 MGP_CBAJ_G0014193.1 mouse_genomes_project X 48616652 48617509 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015941.1 MGP_CBAJ_G0014053.1 mouse_genomes_project X 783603 784194 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011084.1 MGP_CBAJ_G0009222.1 mouse_genomes_project X 146246727 146246792 + Mir3475 miRNA miRNA MGP_CBAJ_T0101397.1 MGP_CBAJ_G0039455.1 mouse_genomes_project X 157271298 157310773 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101398.1 MGP_CBAJ_G0039455.1 mouse_genomes_project X 157298454 157300678 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101399.1 MGP_CBAJ_G0039455.1 mouse_genomes_project X 157302067 157310886 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0016467.1 MGP_CBAJ_G0014579.1 mouse_genomes_project X 132816932 132817596 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098142.1 MGP_CBAJ_G0036415.1 mouse_genomes_project X 158309006 158309125 + n-R5s13 rRNA rRNA MGP_CBAJ_T0016515.1 MGP_CBAJ_G0014627.1 mouse_genomes_project X 143767488 143767695 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096184.1 MGP_CBAJ_G0035511.1 mouse_genomes_project X 75498954 75505038 - MGP_CBAJ_P0096184 Mtcp1 protein_coding protein_coding MGP_CBAJ_T0096185.1 MGP_CBAJ_G0035511.1 mouse_genomes_project X 75499160 75504913 - Mtcp1 protein_coding processed_transcript MGP_CBAJ_T0096186.1 MGP_CBAJ_G0035511.1 mouse_genomes_project X 75499287 75505083 - MGP_CBAJ_P0096186 Mtcp1 protein_coding protein_coding MGP_CBAJ_T0096187.1 MGP_CBAJ_G0035511.1 mouse_genomes_project X 75501668 75505063 - Mtcp1 protein_coding retained_intron MGP_CBAJ_T0016057.1 MGP_CBAJ_G0014169.1 mouse_genomes_project X 40470058 40470230 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002445.1 MGP_CBAJ_G0002357.1 mouse_genomes_project X 158873707 158875184 - TEC TEC MGP_CBAJ_T0002440.1 MGP_CBAJ_G0002352.1 mouse_genomes_project X 106384535 106392715 - TEC TEC MGP_CBAJ_T0011044.1 MGP_CBAJ_G0009182.1 mouse_genomes_project X 66065014 66065093 - Mir465b-2 miRNA miRNA MGP_CBAJ_T0099669.1 MGP_CBAJ_G0037924.1 mouse_genomes_project X 45722110 45722214 + Gm22528 snRNA snRNA MGP_CBAJ_T0096750.1 MGP_CBAJ_G0035681.1 mouse_genomes_project X 114984288 115124279 - MGP_CBAJ_P0096750 Hdx protein_coding protein_coding MGP_CBAJ_T0016388.1 MGP_CBAJ_G0014500.1 mouse_genomes_project X 110551937 110552964 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011030.1 MGP_CBAJ_G0009168.1 mouse_genomes_project X 66004723 66004800 - Mir743b miRNA miRNA MGP_CBAJ_T0016530.1 MGP_CBAJ_G0014642.1 mouse_genomes_project X 147211707 147212063 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016641.1 MGP_CBAJ_G0014753.1 mouse_genomes_project X 170050450 170050904 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095824.1 MGP_CBAJ_G0035447.1 mouse_genomes_project X 72739533 72742797 - MGP_CBAJ_P0095824 Pnma5 protein_coding protein_coding MGP_CBAJ_T0095825.1 MGP_CBAJ_G0035447.1 mouse_genomes_project X 72739540 72741797 - MGP_CBAJ_P0095825 Pnma5 protein_coding protein_coding MGP_CBAJ_T0095826.1 MGP_CBAJ_G0035447.1 mouse_genomes_project X 72739871 72742797 - MGP_CBAJ_P0095826 Pnma5 protein_coding protein_coding MGP_CBAJ_T0016327.1 MGP_CBAJ_G0014439.1 mouse_genomes_project X 104364016 104370885 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016287.1 MGP_CBAJ_G0014399.1 mouse_genomes_project X 96190775 96191676 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100959.1 MGP_CBAJ_G0039214.1 mouse_genomes_project X 135631915 135632044 - Gm25170 snoRNA snoRNA MGP_CBAJ_T0011036.1 MGP_CBAJ_G0009174.1 mouse_genomes_project X 66029531 66029606 - Mir463 miRNA miRNA MGP_CBAJ_T0100921.1 MGP_CBAJ_G0039176.1 mouse_genomes_project X 1994321 1994397 + Gm26401 snoRNA snoRNA MGP_CBAJ_T0095889.1 MGP_CBAJ_G0035467.1 mouse_genomes_project X 73671815 73675612 + MGP_CBAJ_P0095889 Ssr4 protein_coding protein_coding MGP_CBAJ_T0095890.1 MGP_CBAJ_G0035467.1 mouse_genomes_project X 73671849 73675614 + MGP_CBAJ_P0095890 Ssr4 protein_coding protein_coding MGP_CBAJ_T0095891.1 MGP_CBAJ_G0035467.1 mouse_genomes_project X 73671969 73673880 + Ssr4 protein_coding retained_intron MGP_CBAJ_T0095892.1 MGP_CBAJ_G0035467.1 mouse_genomes_project X 73671971 73675120 + Ssr4 protein_coding retained_intron MGP_CBAJ_T0095893.1 MGP_CBAJ_G0035467.1 mouse_genomes_project X 73671971 73675614 + Ssr4 protein_coding retained_intron MGP_CBAJ_T0095894.1 MGP_CBAJ_G0035467.1 mouse_genomes_project X 73672011 73675599 + Ssr4 protein_coding retained_intron MGP_CBAJ_T0095895.1 MGP_CBAJ_G0035467.1 mouse_genomes_project X 73672052 73674951 + Ssr4 protein_coding retained_intron MGP_CBAJ_T0095896.1 MGP_CBAJ_G0035467.1 mouse_genomes_project X 73673631 73675618 + Ssr4 protein_coding retained_intron MGP_CBAJ_T0016315.1 MGP_CBAJ_G0014427.1 mouse_genomes_project X 100843345 100843831 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097322.1 MGP_CBAJ_G0035844.1 mouse_genomes_project X 159777341 159791399 + MGP_CBAJ_P0097322 Foxr2 protein_coding protein_coding MGP_CBAJ_T0097323.1 MGP_CBAJ_G0035844.1 mouse_genomes_project X 159785448 159791399 + MGP_CBAJ_P0097323 Foxr2 protein_coding protein_coding MGP_CBAJ_T0096959.1 MGP_CBAJ_G0035755.1 mouse_genomes_project X 141902065 141927372 - MGP_CBAJ_P0096959 Kir3dl2 protein_coding protein_coding MGP_CBAJ_T0096960.1 MGP_CBAJ_G0035755.1 mouse_genomes_project X 141902420 141927386 - MGP_CBAJ_P0096960 Kir3dl2 protein_coding protein_coding MGP_CBAJ_T0011644.1 MGP_CBAJ_G0009782.1 mouse_genomes_project X 112428286 112428578 - Gm26415 misc_RNA misc_RNA MGP_CBAJ_T0018340.1 MGP_CBAJ_G0015508.1 mouse_genomes_project X 2536146 2543925 + processed_transcript processed_transcript MGP_CBAJ_T0096396.1 MGP_CBAJ_G0035582.1 mouse_genomes_project X 99586373 99640444 - MGP_CBAJ_P0096396 Eda2r protein_coding protein_coding MGP_CBAJ_T0096397.1 MGP_CBAJ_G0035582.1 mouse_genomes_project X 99589670 99640378 - MGP_CBAJ_P0096397 Eda2r protein_coding protein_coding MGP_CBAJ_T0096398.1 MGP_CBAJ_G0035582.1 mouse_genomes_project X 99590323 99640444 - Eda2r protein_coding retained_intron MGP_CBAJ_T0096399.1 MGP_CBAJ_G0035582.1 mouse_genomes_project X 99601087 99640400 - Eda2r protein_coding retained_intron MGP_CBAJ_T0016340.1 MGP_CBAJ_G0014452.1 mouse_genomes_project X 105853084 105853290 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016527.1 MGP_CBAJ_G0014639.1 mouse_genomes_project X 146595778 146596232 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016562.1 MGP_CBAJ_G0014674.1 mouse_genomes_project X 150964419 150965020 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016089.1 MGP_CBAJ_G0014201.1 mouse_genomes_project X 50498108 50498431 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099710.1 MGP_CBAJ_G0037965.1 mouse_genomes_project X 151275723 151275868 + Gm25097 snRNA snRNA MGP_CBAJ_T0016237.1 MGP_CBAJ_G0014349.1 mouse_genomes_project X 86673409 86673777 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0094927.1 MGP_CBAJ_G0035162.1 mouse_genomes_project X 2146302 2150842 - MGP_CBAJ_P0094927 Usp27x protein_coding protein_coding MGP_CBAJ_T0094928.1 MGP_CBAJ_G0035162.1 mouse_genomes_project X 2147606 2150846 - MGP_CBAJ_P0094928 Usp27x protein_coding protein_coding MGP_CBAJ_T0097542.1 MGP_CBAJ_G0035903.1 mouse_genomes_project X 172705028 172755513 - MGP_CBAJ_P0097542 Mospd2 protein_coding protein_coding MGP_CBAJ_T0097543.1 MGP_CBAJ_G0035903.1 mouse_genomes_project X 172707260 172755435 - MGP_CBAJ_P0097543 Mospd2 protein_coding protein_coding MGP_CBAJ_T0097544.1 MGP_CBAJ_G0035903.1 mouse_genomes_project X 172709151 172755473 - MGP_CBAJ_P0097544 Mospd2 protein_coding protein_coding MGP_CBAJ_T0097545.1 MGP_CBAJ_G0035903.1 mouse_genomes_project X 172729362 172755466 - Mospd2 protein_coding retained_intron MGP_CBAJ_T0097546.1 MGP_CBAJ_G0035903.1 mouse_genomes_project X 172729367 172755466 - Mospd2 protein_coding retained_intron MGP_CBAJ_T0097547.1 MGP_CBAJ_G0035903.1 mouse_genomes_project X 172734446 172755463 - Mospd2 protein_coding retained_intron MGP_CBAJ_T0097548.1 MGP_CBAJ_G0035903.1 mouse_genomes_project X 172738215 172755465 - Mospd2 protein_coding retained_intron MGP_CBAJ_T0097549.1 MGP_CBAJ_G0035903.1 mouse_genomes_project X 172738541 172755481 - Mospd2 protein_coding processed_transcript MGP_CBAJ_T0097550.1 MGP_CBAJ_G0035903.1 mouse_genomes_project X 172754798 172755460 - Mospd2 protein_coding retained_intron MGP_CBAJ_T0016339.1 MGP_CBAJ_G0014451.1 mouse_genomes_project X 105843735 105845042 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011060.1 MGP_CBAJ_G0009198.1 mouse_genomes_project X 86466369 86466452 + Gm44378 miRNA miRNA MGP_CBAJ_T0096701.1 MGP_CBAJ_G0035665.1 mouse_genomes_project X 110438158 110481100 + MGP_CBAJ_P0096701 Gpr174 protein_coding protein_coding MGP_CBAJ_T0096702.1 MGP_CBAJ_G0035665.1 mouse_genomes_project X 110438171 110481695 + MGP_CBAJ_P0096702 Gpr174 protein_coding protein_coding MGP_CBAJ_T0096703.1 MGP_CBAJ_G0035665.1 mouse_genomes_project X 110438212 110480235 + MGP_CBAJ_P0096703 Gpr174 protein_coding protein_coding MGP_CBAJ_T0096704.1 MGP_CBAJ_G0035665.1 mouse_genomes_project X 110438499 110480247 + MGP_CBAJ_P0096704 Gpr174 protein_coding protein_coding MGP_CBAJ_T0096705.1 MGP_CBAJ_G0035665.1 mouse_genomes_project X 110452811 110477250 + Gpr174 protein_coding processed_transcript MGP_CBAJ_T0096706.1 MGP_CBAJ_G0035665.1 mouse_genomes_project X 110469329 110477381 + Gpr174 protein_coding processed_transcript MGP_CBAJ_T0096707.1 MGP_CBAJ_G0035665.1 mouse_genomes_project X 110469329 110481697 + MGP_CBAJ_P0096707 Gpr174 protein_coding protein_coding MGP_CBAJ_T0011079.1 MGP_CBAJ_G0009217.1 mouse_genomes_project X 139129623 139129705 + Mir3112 miRNA miRNA MGP_CBAJ_T0011068.1 MGP_CBAJ_G0009206.1 mouse_genomes_project X 106381030 106381106 - Mir421 miRNA miRNA MGP_CBAJ_T0095283.1 MGP_CBAJ_G0035255.1 mouse_genomes_project X 16915148 16982008 - MGP_CBAJ_P0095283 Syn1 protein_coding protein_coding MGP_CBAJ_T0095284.1 MGP_CBAJ_G0035255.1 mouse_genomes_project X 16915152 16981922 - MGP_CBAJ_P0095284 Syn1 protein_coding protein_coding MGP_CBAJ_T0016133.1 MGP_CBAJ_G0014245.1 mouse_genomes_project X 60773039 60774029 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097320.1 MGP_CBAJ_G0035842.1 mouse_genomes_project X 159639134 159642082 + MGP_CBAJ_P0097320 Usp51 protein_coding protein_coding MGP_CBAJ_T0005529.1 MGP_CBAJ_G0004652.1 mouse_genomes_project X 164836633 164870941 - Gm15169 antisense antisense MGP_CBAJ_T0005530.1 MGP_CBAJ_G0004652.1 mouse_genomes_project X 164857848 164870934 - Gm15169 antisense antisense MGP_CBAJ_T0096330.1 MGP_CBAJ_G0035563.1 mouse_genomes_project X 96231623 96245443 - MGP_CBAJ_P0096330 Fam90a1b protein_coding protein_coding MGP_CBAJ_T0096331.1 MGP_CBAJ_G0035563.1 mouse_genomes_project X 96232442 96244431 - MGP_CBAJ_P0096331 Fam90a1b protein_coding protein_coding MGP_CBAJ_T0096332.1 MGP_CBAJ_G0035563.1 mouse_genomes_project X 96233726 96244707 - MGP_CBAJ_P0096332 Fam90a1b protein_coding protein_coding MGP_CBAJ_T0095272.1 MGP_CBAJ_G0035254.1 mouse_genomes_project X 16845961 16915135 + MGP_CBAJ_P0095272 Araf protein_coding nonsense_mediated_decay MGP_CBAJ_T0095273.1 MGP_CBAJ_G0035254.1 mouse_genomes_project X 16902669 16915157 + MGP_CBAJ_P0095273 Araf protein_coding protein_coding MGP_CBAJ_T0095274.1 MGP_CBAJ_G0035254.1 mouse_genomes_project X 16902690 16910148 + Araf protein_coding retained_intron MGP_CBAJ_T0095275.1 MGP_CBAJ_G0035254.1 mouse_genomes_project X 16902692 16907050 + MGP_CBAJ_P0095275 Araf protein_coding protein_coding MGP_CBAJ_T0095276.1 MGP_CBAJ_G0035254.1 mouse_genomes_project X 16902701 16908706 + Araf protein_coding processed_transcript MGP_CBAJ_T0095277.1 MGP_CBAJ_G0035254.1 mouse_genomes_project X 16902704 16907035 + MGP_CBAJ_P0095277 Araf protein_coding protein_coding MGP_CBAJ_T0095278.1 MGP_CBAJ_G0035254.1 mouse_genomes_project X 16902708 16905863 + Araf protein_coding retained_intron MGP_CBAJ_T0095279.1 MGP_CBAJ_G0035254.1 mouse_genomes_project X 16902715 16907596 + MGP_CBAJ_P0095279 Araf protein_coding protein_coding MGP_CBAJ_T0095280.1 MGP_CBAJ_G0035254.1 mouse_genomes_project X 16905275 16906360 + Araf protein_coding retained_intron MGP_CBAJ_T0095281.1 MGP_CBAJ_G0035254.1 mouse_genomes_project X 16907563 16914751 + MGP_CBAJ_P0095281 Araf protein_coding unknown_likely_coding MGP_CBAJ_T0095282.1 MGP_CBAJ_G0035254.1 mouse_genomes_project X 16912360 16914846 + MGP_CBAJ_P0095282 Araf protein_coding protein_coding MGP_CBAJ_T0015939.1 MGP_CBAJ_G0014051.1 mouse_genomes_project X 668163 668403 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016016.1 MGP_CBAJ_G0014128.1 mouse_genomes_project X 17771423 17771804 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018425.1 MGP_CBAJ_G0015534.1 mouse_genomes_project X 159671897 159717274 + 9530051G07Rik processed_transcript processed_transcript MGP_CBAJ_T0016079.1 MGP_CBAJ_G0014191.1 mouse_genomes_project X 47457074 47457747 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016261.1 MGP_CBAJ_G0014373.1 mouse_genomes_project X 90726685 90727406 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099720.1 MGP_CBAJ_G0037975.1 mouse_genomes_project X 169550934 169551038 + Gm23794 snRNA snRNA MGP_CBAJ_T0018348.1 MGP_CBAJ_G0015513.1 mouse_genomes_project X 17022876 17051156 + A230072C01Rik processed_transcript processed_transcript MGP_CBAJ_T0018349.1 MGP_CBAJ_G0015513.1 mouse_genomes_project X 17023306 17051170 + A230072C01Rik processed_transcript processed_transcript MGP_CBAJ_T0097465.1 MGP_CBAJ_G0035882.1 mouse_genomes_project X 169249870 169596504 - MGP_CBAJ_P0097465 Nhs protein_coding protein_coding MGP_CBAJ_T0097466.1 MGP_CBAJ_G0035882.1 mouse_genomes_project X 169253389 169596162 - MGP_CBAJ_P0097466 Nhs protein_coding protein_coding MGP_CBAJ_T0016503.1 MGP_CBAJ_G0014615.1 mouse_genomes_project X 142253918 142254325 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016134.1 MGP_CBAJ_G0014246.1 mouse_genomes_project X 60896604 60897834 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005535.1 MGP_CBAJ_G0004657.1 mouse_genomes_project X 177097466 177170104 - Gm15261 antisense antisense MGP_CBAJ_T0011098.1 MGP_CBAJ_G0009236.1 mouse_genomes_project X 158455212 158455295 + Mirlet7f-2 miRNA miRNA MGP_CBAJ_T0098144.1 MGP_CBAJ_G0036417.1 mouse_genomes_project X 158885434 158885545 + n-R5s15 rRNA rRNA MGP_CBAJ_T0095600.1 MGP_CBAJ_G0035365.1 mouse_genomes_project X 50654405 50694903 + MGP_CBAJ_P0095600 Phf6 protein_coding protein_coding MGP_CBAJ_T0095601.1 MGP_CBAJ_G0035365.1 mouse_genomes_project X 50654408 50703714 + MGP_CBAJ_P0095601 Phf6 protein_coding protein_coding MGP_CBAJ_T0100967.1 MGP_CBAJ_G0039222.1 mouse_genomes_project X 149492863 149492992 + Gm23325 snoRNA snoRNA MGP_CBAJ_T0016567.1 MGP_CBAJ_G0014679.1 mouse_genomes_project X 151901681 151902139 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0094970.1 MGP_CBAJ_G0035172.1 mouse_genomes_project X 2543797 2548105 + MGP_CBAJ_P0094970 Wdr45 protein_coding protein_coding MGP_CBAJ_T0094971.1 MGP_CBAJ_G0035172.1 mouse_genomes_project X 2544044 2550013 + MGP_CBAJ_P0094971 Wdr45 protein_coding protein_coding MGP_CBAJ_T0094972.1 MGP_CBAJ_G0035172.1 mouse_genomes_project X 2544064 2549803 + MGP_CBAJ_P0094972 Wdr45 protein_coding protein_coding MGP_CBAJ_T0094973.1 MGP_CBAJ_G0035172.1 mouse_genomes_project X 2544073 2550014 + MGP_CBAJ_P0094973 Wdr45 protein_coding protein_coding MGP_CBAJ_T0094974.1 MGP_CBAJ_G0035172.1 mouse_genomes_project X 2544074 2548105 + MGP_CBAJ_P0094974 Wdr45 protein_coding protein_coding MGP_CBAJ_T0094975.1 MGP_CBAJ_G0035172.1 mouse_genomes_project X 2544074 2549995 + MGP_CBAJ_P0094975 Wdr45 protein_coding protein_coding MGP_CBAJ_T0094976.1 MGP_CBAJ_G0035172.1 mouse_genomes_project X 2544084 2549763 + MGP_CBAJ_P0094976 Wdr45 protein_coding protein_coding MGP_CBAJ_T0094977.1 MGP_CBAJ_G0035172.1 mouse_genomes_project X 2544179 2546104 + MGP_CBAJ_P0094977 Wdr45 protein_coding protein_coding MGP_CBAJ_T0094978.1 MGP_CBAJ_G0035172.1 mouse_genomes_project X 2544181 2548089 + MGP_CBAJ_P0094978 Wdr45 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094979.1 MGP_CBAJ_G0035172.1 mouse_genomes_project X 2544186 2548104 + MGP_CBAJ_P0094979 Wdr45 protein_coding protein_coding MGP_CBAJ_T0094980.1 MGP_CBAJ_G0035172.1 mouse_genomes_project X 2544557 2548145 + Wdr45 protein_coding processed_transcript MGP_CBAJ_T0094981.1 MGP_CBAJ_G0035172.1 mouse_genomes_project X 2544751 2549816 + MGP_CBAJ_P0094981 Wdr45 protein_coding protein_coding MGP_CBAJ_T0094982.1 MGP_CBAJ_G0035172.1 mouse_genomes_project X 2545143 2547840 + MGP_CBAJ_P0094982 Wdr45 protein_coding protein_coding MGP_CBAJ_T0094983.1 MGP_CBAJ_G0035172.1 mouse_genomes_project X 2545357 2547693 + Wdr45 protein_coding processed_transcript MGP_CBAJ_T0094984.1 MGP_CBAJ_G0035172.1 mouse_genomes_project X 2548385 2549303 + Wdr45 protein_coding processed_transcript MGP_CBAJ_T0016005.1 MGP_CBAJ_G0014117.1 mouse_genomes_project X 15830486 15830702 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016301.1 MGP_CBAJ_G0014413.1 mouse_genomes_project X 97343302 97345373 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099666.1 MGP_CBAJ_G0037921.1 mouse_genomes_project X 40228264 40228454 + Gm24763 snRNA snRNA MGP_CBAJ_T0096457.1 MGP_CBAJ_G0035598.1 mouse_genomes_project X 103089277 103092333 - Pdzd11 protein_coding retained_intron MGP_CBAJ_T0096458.1 MGP_CBAJ_G0035598.1 mouse_genomes_project X 103089280 103092963 - MGP_CBAJ_P0096458 Pdzd11 protein_coding protein_coding MGP_CBAJ_T0096459.1 MGP_CBAJ_G0035598.1 mouse_genomes_project X 103089302 103092330 - MGP_CBAJ_P0096459 Pdzd11 protein_coding protein_coding MGP_CBAJ_T0096460.1 MGP_CBAJ_G0035598.1 mouse_genomes_project X 103089771 103092666 - Pdzd11 protein_coding processed_transcript MGP_CBAJ_T0016243.1 MGP_CBAJ_G0014355.1 mouse_genomes_project X 87204000 87280083 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097350.1 MGP_CBAJ_G0035856.1 mouse_genomes_project X 162105255 162106395 + Acot9 protein_coding processed_transcript MGP_CBAJ_T0097351.1 MGP_CBAJ_G0035856.1 mouse_genomes_project X 162105255 162142235 + MGP_CBAJ_P0097351 Acot9 protein_coding protein_coding MGP_CBAJ_T0097352.1 MGP_CBAJ_G0035856.1 mouse_genomes_project X 162105317 162142227 + MGP_CBAJ_P0097352 Acot9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0097353.1 MGP_CBAJ_G0035856.1 mouse_genomes_project X 162138423 162141494 + Acot9 protein_coding retained_intron MGP_CBAJ_T0098138.1 MGP_CBAJ_G0036411.1 mouse_genomes_project X 87382645 87382764 - n-R5s10 rRNA rRNA MGP_CBAJ_T0100966.1 MGP_CBAJ_G0039221.1 mouse_genomes_project X 148513866 148513992 - Gm25915 snoRNA snoRNA MGP_CBAJ_T0101225.1 MGP_CBAJ_G0039373.1 mouse_genomes_project X 132907413 132908055 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0016073.1 MGP_CBAJ_G0014185.1 mouse_genomes_project X 44937817 44940727 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016271.1 MGP_CBAJ_G0014383.1 mouse_genomes_project X 93034877 93035912 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101217.1 MGP_CBAJ_G0039369.1 mouse_genomes_project X 106327087 106327680 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101218.1 MGP_CBAJ_G0039369.1 mouse_genomes_project X 106327096 106328102 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0095715.1 MGP_CBAJ_G0035410.1 mouse_genomes_project X 63154617 63155409 - MGP_CBAJ_P0095715 Gm6760 protein_coding protein_coding MGP_CBAJ_T0095326.1 MGP_CBAJ_G0035272.1 mouse_genomes_project X 32243442 32438831 + MGP_CBAJ_P0095326 Dock11 protein_coding protein_coding MGP_CBAJ_T0095327.1 MGP_CBAJ_G0035272.1 mouse_genomes_project X 32301857 32438825 + MGP_CBAJ_P0095327 Dock11 protein_coding protein_coding MGP_CBAJ_T0095328.1 MGP_CBAJ_G0035272.1 mouse_genomes_project X 32329394 32338339 + Dock11 protein_coding retained_intron MGP_CBAJ_T0095329.1 MGP_CBAJ_G0035272.1 mouse_genomes_project X 32368040 32373381 + Dock11 protein_coding retained_intron MGP_CBAJ_T0095330.1 MGP_CBAJ_G0035272.1 mouse_genomes_project X 32398968 32438496 + MGP_CBAJ_P0095330 Dock11 protein_coding protein_coding MGP_CBAJ_T0097517.1 MGP_CBAJ_G0035895.1 mouse_genomes_project X 171748608 171783923 + MGP_CBAJ_P0097517 Tmem27 protein_coding protein_coding MGP_CBAJ_T0097518.1 MGP_CBAJ_G0035895.1 mouse_genomes_project X 171749959 171783922 + MGP_CBAJ_P0097518 Tmem27 protein_coding protein_coding MGP_CBAJ_T0097519.1 MGP_CBAJ_G0035895.1 mouse_genomes_project X 171751957 171783277 + MGP_CBAJ_P0097519 Tmem27 protein_coding protein_coding MGP_CBAJ_T0097227.1 MGP_CBAJ_G0035826.1 mouse_genomes_project X 157533711 157577610 + MGP_CBAJ_P0097227 Fgd1 protein_coding protein_coding MGP_CBAJ_T0097228.1 MGP_CBAJ_G0035826.1 mouse_genomes_project X 157534731 157577610 + MGP_CBAJ_P0097228 Fgd1 protein_coding protein_coding MGP_CBAJ_T0097229.1 MGP_CBAJ_G0035826.1 mouse_genomes_project X 157554952 157557238 + Fgd1 protein_coding retained_intron MGP_CBAJ_T0097230.1 MGP_CBAJ_G0035826.1 mouse_genomes_project X 157574198 157575270 + Fgd1 protein_coding retained_intron MGP_CBAJ_T0097153.1 MGP_CBAJ_G0035816.1 mouse_genomes_project X 153255780 153389691 + Htr2c protein_coding retained_intron MGP_CBAJ_T0097154.1 MGP_CBAJ_G0035816.1 mouse_genomes_project X 153255780 153285050 + Htr2c protein_coding retained_intron MGP_CBAJ_T0097155.1 MGP_CBAJ_G0035816.1 mouse_genomes_project X 153255897 153384134 + Htr2c protein_coding processed_transcript MGP_CBAJ_T0097156.1 MGP_CBAJ_G0035816.1 mouse_genomes_project X 153255975 153524819 + MGP_CBAJ_P0097156 Htr2c protein_coding protein_coding MGP_CBAJ_T0097157.1 MGP_CBAJ_G0035816.1 mouse_genomes_project X 153256290 153510457 + MGP_CBAJ_P0097157 Htr2c protein_coding protein_coding MGP_CBAJ_T0095723.1 MGP_CBAJ_G0035415.1 mouse_genomes_project X 65874773 65887046 + MGP_CBAJ_P0095723 Slitrk2 protein_coding protein_coding MGP_CBAJ_T0095724.1 MGP_CBAJ_G0035415.1 mouse_genomes_project X 65878819 65882301 + MGP_CBAJ_P0095724 Slitrk2 protein_coding protein_coding MGP_CBAJ_T0100953.1 MGP_CBAJ_G0039208.1 mouse_genomes_project X 120609511 120609626 + Gm24438 snoRNA snoRNA MGP_CBAJ_T0016256.1 MGP_CBAJ_G0014368.1 mouse_genomes_project X 90303205 90304371 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016368.1 MGP_CBAJ_G0014480.1 mouse_genomes_project X 108126671 108127707 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016288.1 MGP_CBAJ_G0014400.1 mouse_genomes_project X 96205348 96206049 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100981.1 MGP_CBAJ_G0039236.1 mouse_genomes_project X 177787298 177787417 - Gm25651 snoRNA snoRNA MGP_CBAJ_T0010989.1 MGP_CBAJ_G0009127.1 mouse_genomes_project X 2017180 2017248 - Mir188 miRNA miRNA MGP_CBAJ_T0096625.1 MGP_CBAJ_G0035644.1 mouse_genomes_project X 107439738 107596444 - MGP_CBAJ_P0096625 Zdhhc15 protein_coding protein_coding MGP_CBAJ_T0005501.1 MGP_CBAJ_G0004630.1 mouse_genomes_project X 54561182 54564672 - Gm2155 antisense antisense MGP_CBAJ_T0098148.1 MGP_CBAJ_G0036421.1 mouse_genomes_project X 169673864 169673992 + Gm27490 rRNA rRNA MGP_CBAJ_T0011050.1 MGP_CBAJ_G0009188.1 mouse_genomes_project X 71936169 71936251 - Mir224 miRNA miRNA MGP_CBAJ_T0096961.1 MGP_CBAJ_G0035756.1 mouse_genomes_project X 142116775 142207565 + MGP_CBAJ_P0096961 protein_coding protein_coding MGP_CBAJ_T0096962.1 MGP_CBAJ_G0035756.1 mouse_genomes_project X 142116781 142185714 + protein_coding processed_transcript MGP_CBAJ_T0096963.1 MGP_CBAJ_G0035756.1 mouse_genomes_project X 142116788 142186277 + protein_coding processed_transcript MGP_CBAJ_T0096487.1 MGP_CBAJ_G0035604.1 mouse_genomes_project X 103604351 103737784 - MGP_CBAJ_P0096487 Snx12 protein_coding protein_coding MGP_CBAJ_T0096488.1 MGP_CBAJ_G0035604.1 mouse_genomes_project X 103727220 103737794 - MGP_CBAJ_P0096488 Snx12 protein_coding protein_coding MGP_CBAJ_T0096489.1 MGP_CBAJ_G0035604.1 mouse_genomes_project X 103727220 103737780 - MGP_CBAJ_P0096489 Snx12 protein_coding protein_coding MGP_CBAJ_T0096490.1 MGP_CBAJ_G0035604.1 mouse_genomes_project X 103728734 103729787 - Snx12 protein_coding processed_transcript MGP_CBAJ_T0097386.1 MGP_CBAJ_G0035865.1 mouse_genomes_project X 164891439 164893374 + MGP_CBAJ_P0097386 Klhl34 protein_coding protein_coding MGP_CBAJ_T0016419.1 MGP_CBAJ_G0014531.1 mouse_genomes_project X 118120295 118121656 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097235.1 MGP_CBAJ_G0035828.1 mouse_genomes_project X 157663079 157824915 + MGP_CBAJ_P0097235 Wnk3 protein_coding unknown_likely_coding MGP_CBAJ_T0097236.1 MGP_CBAJ_G0035828.1 mouse_genomes_project X 157704638 157819939 + MGP_CBAJ_P0097236 Wnk3 protein_coding protein_coding MGP_CBAJ_T0097237.1 MGP_CBAJ_G0035828.1 mouse_genomes_project X 157704700 157819881 + MGP_CBAJ_P0097237 Wnk3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0097238.1 MGP_CBAJ_G0035828.1 mouse_genomes_project X 157704700 157823062 + MGP_CBAJ_P0097238 Wnk3 protein_coding protein_coding MGP_CBAJ_T0097239.1 MGP_CBAJ_G0035828.1 mouse_genomes_project X 157714310 157731833 + Wnk3 protein_coding processed_transcript MGP_CBAJ_T0097240.1 MGP_CBAJ_G0035828.1 mouse_genomes_project X 157798352 157824905 + Wnk3 protein_coding processed_transcript MGP_CBAJ_T0096938.1 MGP_CBAJ_G0035744.1 mouse_genomes_project X 141274250 141279478 + MGP_CBAJ_P0096938 Bhlhb9 protein_coding protein_coding MGP_CBAJ_T0096939.1 MGP_CBAJ_G0035744.1 mouse_genomes_project X 141274252 141279481 + MGP_CBAJ_P0096939 Bhlhb9 protein_coding protein_coding MGP_CBAJ_T0096940.1 MGP_CBAJ_G0035744.1 mouse_genomes_project X 141274252 141277726 + MGP_CBAJ_P0096940 Bhlhb9 protein_coding protein_coding MGP_CBAJ_T0096941.1 MGP_CBAJ_G0035744.1 mouse_genomes_project X 141274382 141275870 + Bhlhb9 protein_coding retained_intron MGP_CBAJ_T0015973.1 MGP_CBAJ_G0014085.1 mouse_genomes_project X 7313689 7313919 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011087.1 MGP_CBAJ_G0009225.1 mouse_genomes_project X 149907071 149907193 - miRNA miRNA MGP_CBAJ_T0016156.1 MGP_CBAJ_G0014268.1 mouse_genomes_project X 67057509 67058072 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016627.1 MGP_CBAJ_G0014739.1 mouse_genomes_project X 166284164 166286741 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095831.1 MGP_CBAJ_G0035452.1 mouse_genomes_project X 73090438 73097909 - MGP_CBAJ_P0095831 protein_coding protein_coding MGP_CBAJ_T0096633.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108807977 108947790 - MGP_CBAJ_P0096633 Atrx protein_coding protein_coding MGP_CBAJ_T0096634.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108810779 108812413 - Atrx protein_coding retained_intron MGP_CBAJ_T0096635.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108812112 108814162 - Atrx protein_coding retained_intron MGP_CBAJ_T0096636.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108829802 108838675 - MGP_CBAJ_P0096636 Atrx protein_coding nonsense_mediated_decay MGP_CBAJ_T0096637.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108829828 108842201 - Atrx protein_coding processed_transcript MGP_CBAJ_T0096638.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108838693 108850827 - MGP_CBAJ_P0096638 Atrx protein_coding nonsense_mediated_decay MGP_CBAJ_T0096639.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108850579 108858910 - Atrx protein_coding retained_intron MGP_CBAJ_T0096640.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108850934 108859094 - Atrx protein_coding retained_intron MGP_CBAJ_T0096641.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108858520 108863963 - Atrx protein_coding retained_intron MGP_CBAJ_T0096642.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108858873 108863675 - Atrx protein_coding retained_intron MGP_CBAJ_T0096643.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108863585 108890831 - Atrx protein_coding retained_intron MGP_CBAJ_T0096644.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108864151 108891162 - MGP_CBAJ_P0096644 Atrx protein_coding protein_coding MGP_CBAJ_T0096645.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108868741 108903353 - MGP_CBAJ_P0096645 Atrx protein_coding nonsense_mediated_decay MGP_CBAJ_T0096646.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108881065 108890872 - MGP_CBAJ_P0096646 Atrx protein_coding protein_coding MGP_CBAJ_T0096647.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108890696 108947753 - MGP_CBAJ_P0096647 Atrx protein_coding protein_coding MGP_CBAJ_T0096648.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108892074 108947729 - MGP_CBAJ_P0096648 Atrx protein_coding protein_coding MGP_CBAJ_T0096649.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108892526 108947757 - MGP_CBAJ_P0096649 Atrx protein_coding protein_coding MGP_CBAJ_T0096650.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108892526 108947737 - MGP_CBAJ_P0096650 Atrx protein_coding protein_coding MGP_CBAJ_T0096651.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108892806 108947754 - MGP_CBAJ_P0096651 Atrx protein_coding protein_coding MGP_CBAJ_T0096652.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108893007 108947746 - MGP_CBAJ_P0096652 Atrx protein_coding protein_coding MGP_CBAJ_T0096653.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108893046 108947734 - MGP_CBAJ_P0096653 Atrx protein_coding protein_coding MGP_CBAJ_T0096654.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108893931 108895950 - Atrx protein_coding retained_intron MGP_CBAJ_T0096655.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108893951 108947625 - MGP_CBAJ_P0096655 Atrx protein_coding protein_coding MGP_CBAJ_T0096656.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108897517 108945510 - MGP_CBAJ_P0096656 Atrx protein_coding protein_coding MGP_CBAJ_T0096657.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108899885 108947690 - MGP_CBAJ_P0096657 Atrx protein_coding protein_coding MGP_CBAJ_T0096658.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108903310 108947784 - MGP_CBAJ_P0096658 Atrx protein_coding protein_coding MGP_CBAJ_T0096659.1 MGP_CBAJ_G0035650.1 mouse_genomes_project X 108916796 108947733 - Atrx protein_coding processed_transcript MGP_CBAJ_T0096912.1 MGP_CBAJ_G0035734.1 mouse_genomes_project X 140433081 140446665 - MGP_CBAJ_P0096912 protein_coding protein_coding MGP_CBAJ_T0095314.1 MGP_CBAJ_G0035268.1 mouse_genomes_project X 19418724 19488236 - MGP_CBAJ_P0095314 Klhl13 protein_coding protein_coding MGP_CBAJ_T0095315.1 MGP_CBAJ_G0035268.1 mouse_genomes_project X 19418732 19489138 - MGP_CBAJ_P0095315 Klhl13 protein_coding protein_coding MGP_CBAJ_T0095316.1 MGP_CBAJ_G0035268.1 mouse_genomes_project X 19418733 19525048 - MGP_CBAJ_P0095316 Klhl13 protein_coding protein_coding MGP_CBAJ_T0095317.1 MGP_CBAJ_G0035268.1 mouse_genomes_project X 19418733 19466814 - MGP_CBAJ_P0095317 Klhl13 protein_coding protein_coding MGP_CBAJ_T0095318.1 MGP_CBAJ_G0035268.1 mouse_genomes_project X 19433109 19499603 - Klhl13 protein_coding processed_transcript MGP_CBAJ_T0096146.1 MGP_CBAJ_G0035503.1 mouse_genomes_project X 75004292 75005405 + MGP_CBAJ_P0096146 Gm6880 protein_coding protein_coding MGP_CBAJ_T0016204.1 MGP_CBAJ_G0014316.1 mouse_genomes_project X 77451908 77452436 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005496.1 MGP_CBAJ_G0004626.1 mouse_genomes_project X 43534934 43596171 - 4930515L19Rik antisense antisense MGP_CBAJ_T0095754.1 MGP_CBAJ_G0035427.1 mouse_genomes_project X 69995521 70015967 - MGP_CBAJ_P0095754 Tmem185a protein_coding protein_coding MGP_CBAJ_T0095755.1 MGP_CBAJ_G0035427.1 mouse_genomes_project X 69996727 70015967 - MGP_CBAJ_P0095755 Tmem185a protein_coding protein_coding MGP_CBAJ_T0095756.1 MGP_CBAJ_G0035427.1 mouse_genomes_project X 69996822 70008966 - Tmem185a protein_coding processed_transcript MGP_CBAJ_T0095757.1 MGP_CBAJ_G0035427.1 mouse_genomes_project X 69998691 70015929 - Tmem185a protein_coding processed_transcript MGP_CBAJ_T0011097.1 MGP_CBAJ_G0009235.1 mouse_genomes_project X 158402411 158402487 + Mir3113 miRNA miRNA MGP_CBAJ_T0102261.1 MGP_CBAJ_G0040290.1 mouse_genomes_project X 93195188 93196107 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016608.1 MGP_CBAJ_G0014720.1 mouse_genomes_project X 162345412 162345982 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016636.1 MGP_CBAJ_G0014748.1 mouse_genomes_project X 168016713 168016996 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099707.1 MGP_CBAJ_G0037962.1 mouse_genomes_project X 144017471 144017578 - Gm22057 snRNA snRNA MGP_CBAJ_T0102280.1 MGP_CBAJ_G0040309.1 mouse_genomes_project X 161077616 161081249 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0096660.1 MGP_CBAJ_G0035651.1 mouse_genomes_project X 108998638 109044406 - MGP_CBAJ_P0096660 Magt1 protein_coding protein_coding MGP_CBAJ_T0096661.1 MGP_CBAJ_G0035651.1 mouse_genomes_project X 108998638 109044413 - MGP_CBAJ_P0096661 Magt1 protein_coding protein_coding MGP_CBAJ_T0096662.1 MGP_CBAJ_G0035651.1 mouse_genomes_project X 109000849 109044293 - MGP_CBAJ_P0096662 Magt1 protein_coding protein_coding MGP_CBAJ_T0096663.1 MGP_CBAJ_G0035651.1 mouse_genomes_project X 109007555 109044287 - MGP_CBAJ_P0096663 Magt1 protein_coding protein_coding MGP_CBAJ_T0009295.1 MGP_CBAJ_G0007455.1 mouse_genomes_project X 106258541 106264887 - Xist lincRNA lincRNA MGP_CBAJ_T0009296.1 MGP_CBAJ_G0007455.1 mouse_genomes_project X 106258663 106280546 - Xist lincRNA lincRNA MGP_CBAJ_T0009297.1 MGP_CBAJ_G0007455.1 mouse_genomes_project X 106267033 106267985 - Xist lincRNA lincRNA MGP_CBAJ_T0009337.1 MGP_CBAJ_G0007477.1 mouse_genomes_project X 174559796 174590346 + Gm1720 lincRNA lincRNA MGP_CBAJ_T0016182.1 MGP_CBAJ_G0014294.1 mouse_genomes_project X 74232420 74232636 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097500.1 MGP_CBAJ_G0035891.1 mouse_genomes_project X 171552760 171578523 + MGP_CBAJ_P0097500 Ap1s2 protein_coding protein_coding MGP_CBAJ_T0097501.1 MGP_CBAJ_G0035891.1 mouse_genomes_project X 171552885 171578216 + MGP_CBAJ_P0097501 Ap1s2 protein_coding protein_coding MGP_CBAJ_T0097502.1 MGP_CBAJ_G0035891.1 mouse_genomes_project X 171552888 171574403 + MGP_CBAJ_P0097502 Ap1s2 protein_coding protein_coding MGP_CBAJ_T0097503.1 MGP_CBAJ_G0035891.1 mouse_genomes_project X 171555144 171578213 + MGP_CBAJ_P0097503 Ap1s2 protein_coding protein_coding MGP_CBAJ_T0096729.1 MGP_CBAJ_G0035674.1 mouse_genomes_project X 112408011 112475479 + MGP_CBAJ_P0096729 Sh3bgrl protein_coding protein_coding MGP_CBAJ_T0096730.1 MGP_CBAJ_G0035674.1 mouse_genomes_project X 112408155 112510974 + Sh3bgrl protein_coding processed_transcript MGP_CBAJ_T0096731.1 MGP_CBAJ_G0035674.1 mouse_genomes_project X 112427033 112467347 + Sh3bgrl protein_coding processed_transcript MGP_CBAJ_T0102253.1 MGP_CBAJ_G0040282.1 mouse_genomes_project X 78075143 78214448 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016014.1 MGP_CBAJ_G0014126.1 mouse_genomes_project X 17226545 17227342 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095689.1 MGP_CBAJ_G0035400.1 mouse_genomes_project X 57504047 57586569 - MGP_CBAJ_P0095689 Fgf13 protein_coding protein_coding MGP_CBAJ_T0095690.1 MGP_CBAJ_G0035400.1 mouse_genomes_project X 57504047 58043930 - MGP_CBAJ_P0095690 Fgf13 protein_coding protein_coding MGP_CBAJ_T0095691.1 MGP_CBAJ_G0035400.1 mouse_genomes_project X 57504047 57619036 - MGP_CBAJ_P0095691 Fgf13 protein_coding protein_coding MGP_CBAJ_T0095692.1 MGP_CBAJ_G0035400.1 mouse_genomes_project X 57505412 57585348 - Fgf13 protein_coding processed_transcript MGP_CBAJ_T0095693.1 MGP_CBAJ_G0035400.1 mouse_genomes_project X 57584058 57585296 - Fgf13 protein_coding processed_transcript MGP_CBAJ_T0095694.1 MGP_CBAJ_G0035400.1 mouse_genomes_project X 57584061 58043331 - MGP_CBAJ_P0095694 Fgf13 protein_coding protein_coding MGP_CBAJ_T0095695.1 MGP_CBAJ_G0035400.1 mouse_genomes_project X 57722886 58043930 - MGP_CBAJ_P0095695 Fgf13 protein_coding protein_coding MGP_CBAJ_T0095696.1 MGP_CBAJ_G0035400.1 mouse_genomes_project X 57722963 58043680 - MGP_CBAJ_P0095696 Fgf13 protein_coding protein_coding MGP_CBAJ_T0095697.1 MGP_CBAJ_G0035400.1 mouse_genomes_project X 58042672 58043907 - Fgf13 protein_coding retained_intron MGP_CBAJ_T0011080.1 MGP_CBAJ_G0009218.1 mouse_genomes_project X 139927744 139927845 + Mir7093 miRNA miRNA MGP_CBAJ_T0096345.1 MGP_CBAJ_G0035568.1 mouse_genomes_project X 97014107 97017579 - MGP_CBAJ_P0096345 Spin4 protein_coding protein_coding MGP_CBAJ_T0099659.1 MGP_CBAJ_G0037914.1 mouse_genomes_project X 16848468 16848573 - Gm26065 snRNA snRNA MGP_CBAJ_T0015998.1 MGP_CBAJ_G0014110.1 mouse_genomes_project X 13437785 13439640 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016431.1 MGP_CBAJ_G0014543.1 mouse_genomes_project X 120751816 120752119 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016148.1 MGP_CBAJ_G0014260.1 mouse_genomes_project X 65138941 65141069 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098145.1 MGP_CBAJ_G0036418.1 mouse_genomes_project X 162414040 162414159 + n-R5s16 rRNA rRNA MGP_CBAJ_T0097069.1 MGP_CBAJ_G0035790.1 mouse_genomes_project X 146641983 146656097 + MGP_CBAJ_P0097069 Mid2 protein_coding protein_coding MGP_CBAJ_T0097070.1 MGP_CBAJ_G0035790.1 mouse_genomes_project X 146642340 146756758 + MGP_CBAJ_P0097070 Mid2 protein_coding protein_coding MGP_CBAJ_T0097071.1 MGP_CBAJ_G0035790.1 mouse_genomes_project X 146642456 146753038 + MGP_CBAJ_P0097071 Mid2 protein_coding protein_coding MGP_CBAJ_T0097072.1 MGP_CBAJ_G0035790.1 mouse_genomes_project X 146655416 146756758 + MGP_CBAJ_P0097072 Mid2 protein_coding protein_coding MGP_CBAJ_T0097073.1 MGP_CBAJ_G0035790.1 mouse_genomes_project X 146738852 146742021 + Mid2 protein_coding retained_intron MGP_CBAJ_T0096803.1 MGP_CBAJ_G0035703.1 mouse_genomes_project X 131275766 131279164 - MGP_CBAJ_P0096803 4932411N23Rik protein_coding protein_coding MGP_CBAJ_T0097586.1 MGP_CBAJ_G0035913.1 mouse_genomes_project X 174399328 174470231 - MGP_CBAJ_P0097586 Egfl6 protein_coding protein_coding MGP_CBAJ_T0016332.1 MGP_CBAJ_G0014444.1 mouse_genomes_project X 104841885 104842349 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099682.1 MGP_CBAJ_G0037937.1 mouse_genomes_project X 77748760 77748933 + Gm23121 snRNA snRNA MGP_CBAJ_T0102241.1 MGP_CBAJ_G0040270.1 mouse_genomes_project X 52150051 52155308 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016607.1 MGP_CBAJ_G0014719.1 mouse_genomes_project X 162156044 162157595 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005507.1 MGP_CBAJ_G0004635.1 mouse_genomes_project X 69396148 69612013 - antisense antisense MGP_CBAJ_T0016038.1 MGP_CBAJ_G0014150.1 mouse_genomes_project X 36150804 36151211 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099681.1 MGP_CBAJ_G0037936.1 mouse_genomes_project X 75688470 75688634 - Gm25421 snRNA snRNA MGP_CBAJ_T0095564.1 MGP_CBAJ_G0035350.1 mouse_genomes_project X 47219768 47220728 - MGP_CBAJ_P0095564 Olfr1321 protein_coding protein_coding MGP_CBAJ_T0095385.1 MGP_CBAJ_G0035297.1 mouse_genomes_project X 34159843 34167825 - MGP_CBAJ_P0095385 protein_coding protein_coding MGP_CBAJ_T0016347.1 MGP_CBAJ_G0014459.1 mouse_genomes_project X 106112542 106112966 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016507.1 MGP_CBAJ_G0014619.1 mouse_genomes_project X 142589522 142589818 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016168.1 MGP_CBAJ_G0014280.1 mouse_genomes_project X 69953012 69953960 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015966.1 MGP_CBAJ_G0014078.1 mouse_genomes_project X 6133995 6134451 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096606.1 MGP_CBAJ_G0035632.1 mouse_genomes_project X 105669952 105670410 + MGP_CBAJ_P0096606 1700011M02Rik protein_coding protein_coding MGP_CBAJ_T0100969.1 MGP_CBAJ_G0039224.1 mouse_genomes_project X 153842128 153842257 - Gm25107 snoRNA snoRNA MGP_CBAJ_T0096239.1 MGP_CBAJ_G0035533.1 mouse_genomes_project X 79961987 80015321 - MGP_CBAJ_P0096239 Mageb16 protein_coding protein_coding MGP_CBAJ_T0097610.1 MGP_CBAJ_G0035920.1 mouse_genomes_project X 176848941 177373227 + MGP_CBAJ_P0097610 Arhgap6 protein_coding protein_coding MGP_CBAJ_T0097611.1 MGP_CBAJ_G0035920.1 mouse_genomes_project X 177096410 177323856 + Arhgap6 protein_coding retained_intron MGP_CBAJ_T0097612.1 MGP_CBAJ_G0035920.1 mouse_genomes_project X 177096410 177326398 + MGP_CBAJ_P0097612 Arhgap6 protein_coding protein_coding MGP_CBAJ_T0097613.1 MGP_CBAJ_G0035920.1 mouse_genomes_project X 177096410 177373227 + MGP_CBAJ_P0097613 Arhgap6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0097614.1 MGP_CBAJ_G0035920.1 mouse_genomes_project X 177096410 177373227 + MGP_CBAJ_P0097614 Arhgap6 protein_coding protein_coding MGP_CBAJ_T0097615.1 MGP_CBAJ_G0035920.1 mouse_genomes_project X 177096410 177331273 + MGP_CBAJ_P0097615 Arhgap6 protein_coding protein_coding MGP_CBAJ_T0097616.1 MGP_CBAJ_G0035920.1 mouse_genomes_project X 177179499 177373227 + MGP_CBAJ_P0097616 Arhgap6 protein_coding protein_coding MGP_CBAJ_T0097622.1 MGP_CBAJ_G0035920.1 mouse_genomes_project X 177284793 177363903 + MGP_CBAJ_P0097622 Arhgap6 protein_coding unknown_likely_coding MGP_CBAJ_T0016322.1 MGP_CBAJ_G0014434.1 mouse_genomes_project X 103051570 103051970 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096083.1 MGP_CBAJ_G0035488.1 mouse_genomes_project X 74289272 74292450 + Plxna3 protein_coding processed_transcript MGP_CBAJ_T0096084.1 MGP_CBAJ_G0035488.1 mouse_genomes_project X 74289272 74304889 + MGP_CBAJ_P0096084 Plxna3 protein_coding protein_coding MGP_CBAJ_T0096085.1 MGP_CBAJ_G0035488.1 mouse_genomes_project X 74292663 74304883 + Plxna3 protein_coding retained_intron MGP_CBAJ_T0096086.1 MGP_CBAJ_G0035488.1 mouse_genomes_project X 74293952 74294910 + Plxna3 protein_coding retained_intron MGP_CBAJ_T0096087.1 MGP_CBAJ_G0035488.1 mouse_genomes_project X 74294532 74296039 + Plxna3 protein_coding retained_intron MGP_CBAJ_T0096088.1 MGP_CBAJ_G0035488.1 mouse_genomes_project X 74295438 74296536 + Plxna3 protein_coding retained_intron MGP_CBAJ_T0096089.1 MGP_CBAJ_G0035488.1 mouse_genomes_project X 74298465 74299516 + Plxna3 protein_coding retained_intron MGP_CBAJ_T0096090.1 MGP_CBAJ_G0035488.1 mouse_genomes_project X 74298548 74299359 + Plxna3 protein_coding retained_intron MGP_CBAJ_T0096091.1 MGP_CBAJ_G0035488.1 mouse_genomes_project X 74301786 74304145 + Plxna3 protein_coding retained_intron MGP_CBAJ_T0016442.1 MGP_CBAJ_G0014554.1 mouse_genomes_project X 122134684 122135035 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016255.1 MGP_CBAJ_G0014367.1 mouse_genomes_project X 90251519 90251792 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011028.1 MGP_CBAJ_G0009166.1 mouse_genomes_project X 59795289 59795382 + Gm24396 miRNA miRNA MGP_CBAJ_T0016408.1 MGP_CBAJ_G0014520.1 mouse_genomes_project X 116268246 116269868 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016619.1 MGP_CBAJ_G0014731.1 mouse_genomes_project X 164718457 164719053 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095357.1 MGP_CBAJ_G0035283.1 mouse_genomes_project X 33294462 33295034 + Ube2a protein_coding processed_transcript MGP_CBAJ_T0095358.1 MGP_CBAJ_G0035283.1 mouse_genomes_project X 33294893 33295930 + Ube2a protein_coding retained_intron MGP_CBAJ_T0095359.1 MGP_CBAJ_G0035283.1 mouse_genomes_project X 33294893 33303587 + MGP_CBAJ_P0095359 Ube2a protein_coding protein_coding MGP_CBAJ_T0095360.1 MGP_CBAJ_G0035283.1 mouse_genomes_project X 33294903 33304261 + MGP_CBAJ_P0095360 Ube2a protein_coding protein_coding MGP_CBAJ_T0095361.1 MGP_CBAJ_G0035283.1 mouse_genomes_project X 33295048 33303477 + MGP_CBAJ_P0095361 Ube2a protein_coding protein_coding MGP_CBAJ_T0095362.1 MGP_CBAJ_G0035283.1 mouse_genomes_project X 33301813 33303592 + Ube2a protein_coding retained_intron MGP_CBAJ_T0016201.1 MGP_CBAJ_G0014313.1 mouse_genomes_project X 77053087 77053465 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016299.1 MGP_CBAJ_G0014411.1 mouse_genomes_project X 97227484 97229465 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095116.1 MGP_CBAJ_G0035203.1 mouse_genomes_project X 3847671 3854941 + MGP_CBAJ_P0095116 protein_coding protein_coding MGP_CBAJ_T0009320.1 MGP_CBAJ_G0007467.1 mouse_genomes_project X 146767250 146794851 + Eif2c5 lincRNA lincRNA MGP_CBAJ_T0016282.1 MGP_CBAJ_G0014394.1 mouse_genomes_project X 95756038 95756309 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016504.1 MGP_CBAJ_G0014616.1 mouse_genomes_project X 142467482 142467940 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016606.1 MGP_CBAJ_G0014718.1 mouse_genomes_project X 162021666 162022368 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0102275.1 MGP_CBAJ_G0040304.1 mouse_genomes_project X 154105157 154107072 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0095302.1 MGP_CBAJ_G0035261.1 mouse_genomes_project X 17145303 17152108 + MGP_CBAJ_P0095302 Spaca5 protein_coding protein_coding MGP_CBAJ_T0011007.1 MGP_CBAJ_G0009145.1 mouse_genomes_project X 48824664 48824744 - Gm25241 miRNA miRNA MGP_CBAJ_T0016236.1 MGP_CBAJ_G0014348.1 mouse_genomes_project X 86595713 86596299 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096417.1 MGP_CBAJ_G0035586.1 mouse_genomes_project X 101364057 101426070 + MGP_CBAJ_P0096417 Stard8 protein_coding protein_coding MGP_CBAJ_T0096418.1 MGP_CBAJ_G0035586.1 mouse_genomes_project X 101404464 101426221 + Stard8 protein_coding processed_transcript MGP_CBAJ_T0096419.1 MGP_CBAJ_G0035586.1 mouse_genomes_project X 101404527 101435135 + MGP_CBAJ_P0096419 Stard8 protein_coding protein_coding MGP_CBAJ_T0096420.1 MGP_CBAJ_G0035586.1 mouse_genomes_project X 101429010 101430847 + Stard8 protein_coding processed_transcript MGP_CBAJ_T0097556.1 MGP_CBAJ_G0035907.1 mouse_genomes_project X 174027494 174049035 + MGP_CBAJ_P0097556 Gemin8 protein_coding protein_coding MGP_CBAJ_T0097557.1 MGP_CBAJ_G0035907.1 mouse_genomes_project X 174027494 174049743 + MGP_CBAJ_P0097557 Gemin8 protein_coding protein_coding MGP_CBAJ_T0097558.1 MGP_CBAJ_G0035907.1 mouse_genomes_project X 174027532 174049051 + MGP_CBAJ_P0097558 Gemin8 protein_coding protein_coding MGP_CBAJ_T0097559.1 MGP_CBAJ_G0035907.1 mouse_genomes_project X 174027535 174049741 + MGP_CBAJ_P0097559 Gemin8 protein_coding protein_coding MGP_CBAJ_T0097560.1 MGP_CBAJ_G0035907.1 mouse_genomes_project X 174035164 174037544 + MGP_CBAJ_P0097560 Gemin8 protein_coding protein_coding MGP_CBAJ_T0097561.1 MGP_CBAJ_G0035907.1 mouse_genomes_project X 174035186 174046099 + MGP_CBAJ_P0097561 Gemin8 protein_coding protein_coding MGP_CBAJ_T0015993.1 MGP_CBAJ_G0014105.1 mouse_genomes_project X 12293932 12296527 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016405.1 MGP_CBAJ_G0014517.1 mouse_genomes_project X 115953473 115956373 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099705.1 MGP_CBAJ_G0037960.1 mouse_genomes_project X 133262376 133262484 + Gm24522 snRNA snRNA MGP_CBAJ_T0011659.1 MGP_CBAJ_G0009797.1 mouse_genomes_project X 170642355 170642611 - Gm23501 misc_RNA misc_RNA MGP_CBAJ_T0095430.1 MGP_CBAJ_G0035318.1 mouse_genomes_project X 36566222 36566908 - MGP_CBAJ_P0095430 Cypt14 protein_coding protein_coding MGP_CBAJ_T0016279.1 MGP_CBAJ_G0014391.1 mouse_genomes_project X 95333490 95336227 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095411.1 MGP_CBAJ_G0035312.1 mouse_genomes_project X 34984449 35041137 - MGP_CBAJ_P0095411 Lamp2 protein_coding protein_coding MGP_CBAJ_T0095412.1 MGP_CBAJ_G0035312.1 mouse_genomes_project X 34988155 35041137 - MGP_CBAJ_P0095412 Lamp2 protein_coding protein_coding MGP_CBAJ_T0095413.1 MGP_CBAJ_G0035312.1 mouse_genomes_project X 34999865 35041137 - MGP_CBAJ_P0095413 Lamp2 protein_coding protein_coding MGP_CBAJ_T0095414.1 MGP_CBAJ_G0035312.1 mouse_genomes_project X 35009971 35023067 - Lamp2 protein_coding retained_intron MGP_CBAJ_T0095415.1 MGP_CBAJ_G0035312.1 mouse_genomes_project X 35037572 35041097 - Lamp2 protein_coding processed_transcript MGP_CBAJ_T0095485.1 MGP_CBAJ_G0035326.1 mouse_genomes_project X 40620930 40623303 + MGP_CBAJ_P0095485 Gm362 protein_coding protein_coding MGP_CBAJ_T0016188.1 MGP_CBAJ_G0014300.1 mouse_genomes_project X 74554105 74554854 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011061.1 MGP_CBAJ_G0009199.1 mouse_genomes_project X 96141186 96141250 + Mir7673 miRNA miRNA MGP_CBAJ_T0016361.1 MGP_CBAJ_G0014473.1 mouse_genomes_project X 106860622 106860894 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016138.1 MGP_CBAJ_G0014250.1 mouse_genomes_project X 61463060 61463546 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016295.1 MGP_CBAJ_G0014407.1 mouse_genomes_project X 96704869 96706285 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009325.1 MGP_CBAJ_G0007471.1 mouse_genomes_project X 157663989 157666040 + Gm15138 lincRNA lincRNA MGP_CBAJ_T0096361.1 MGP_CBAJ_G0035570.1 mouse_genomes_project X 97438344 97461457 - MGP_CBAJ_P0096361 Amer1 protein_coding protein_coding MGP_CBAJ_T0016330.1 MGP_CBAJ_G0014442.1 mouse_genomes_project X 104410143 104411024 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015989.1 MGP_CBAJ_G0014101.1 mouse_genomes_project X 11181191 11181733 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016556.1 MGP_CBAJ_G0014668.1 mouse_genomes_project X 150317181 150317337 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016386.1 MGP_CBAJ_G0014498.1 mouse_genomes_project X 110418776 110419247 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005502.1 MGP_CBAJ_G0004631.1 mouse_genomes_project X 55492989 55498552 + Gm14718 antisense antisense MGP_CBAJ_T0018380.1 MGP_CBAJ_G0015524.1 mouse_genomes_project X 108015844 108050647 - 5530601H04Rik processed_transcript processed_transcript MGP_CBAJ_T0018381.1 MGP_CBAJ_G0015524.1 mouse_genomes_project X 108017455 108050597 - 5530601H04Rik processed_transcript processed_transcript MGP_CBAJ_T0018382.1 MGP_CBAJ_G0015524.1 mouse_genomes_project X 108017464 108050593 - 5530601H04Rik processed_transcript processed_transcript MGP_CBAJ_T0018383.1 MGP_CBAJ_G0015524.1 mouse_genomes_project X 108019463 108050675 - 5530601H04Rik processed_transcript processed_transcript MGP_CBAJ_T0018384.1 MGP_CBAJ_G0015524.1 mouse_genomes_project X 108020010 108050675 - 5530601H04Rik processed_transcript processed_transcript MGP_CBAJ_T0018385.1 MGP_CBAJ_G0015524.1 mouse_genomes_project X 108021268 108050638 - 5530601H04Rik processed_transcript processed_transcript MGP_CBAJ_T0018386.1 MGP_CBAJ_G0015524.1 mouse_genomes_project X 108021880 108050594 - 5530601H04Rik processed_transcript processed_transcript MGP_CBAJ_T0018387.1 MGP_CBAJ_G0015524.1 mouse_genomes_project X 108022412 108050606 - 5530601H04Rik processed_transcript processed_transcript MGP_CBAJ_T0018388.1 MGP_CBAJ_G0015524.1 mouse_genomes_project X 108022610 108050586 - 5530601H04Rik processed_transcript processed_transcript MGP_CBAJ_T0018389.1 MGP_CBAJ_G0015524.1 mouse_genomes_project X 108022685 108050659 - 5530601H04Rik processed_transcript processed_transcript MGP_CBAJ_T0018390.1 MGP_CBAJ_G0015524.1 mouse_genomes_project X 108043396 108050655 - 5530601H04Rik processed_transcript processed_transcript MGP_CBAJ_T0018391.1 MGP_CBAJ_G0015524.1 mouse_genomes_project X 108048415 108050645 - 5530601H04Rik processed_transcript retained_intron MGP_CBAJ_T0018392.1 MGP_CBAJ_G0015524.1 mouse_genomes_project X 108049662 108059552 - 5530601H04Rik processed_transcript processed_transcript MGP_CBAJ_T0018393.1 MGP_CBAJ_G0015524.1 mouse_genomes_project X 108055185 108055951 - 5530601H04Rik processed_transcript processed_transcript MGP_CBAJ_T0018394.1 MGP_CBAJ_G0015524.1 mouse_genomes_project X 108055405 108059749 - 5530601H04Rik processed_transcript processed_transcript MGP_CBAJ_T0018395.1 MGP_CBAJ_G0015524.1 mouse_genomes_project X 108057418 108059576 - 5530601H04Rik processed_transcript processed_transcript MGP_CBAJ_T0097024.1 MGP_CBAJ_G0035778.1 mouse_genomes_project X 145400153 145528031 + MGP_CBAJ_P0097024 Rnf128 protein_coding protein_coding MGP_CBAJ_T0097025.1 MGP_CBAJ_G0035778.1 mouse_genomes_project X 145452514 145528038 + MGP_CBAJ_P0097025 Rnf128 protein_coding protein_coding MGP_CBAJ_T0097026.1 MGP_CBAJ_G0035778.1 mouse_genomes_project X 145453261 145526633 + Rnf128 protein_coding processed_transcript MGP_CBAJ_T0100978.1 MGP_CBAJ_G0039233.1 mouse_genomes_project X 170245650 170245769 + Gm23786 snoRNA snoRNA MGP_CBAJ_T0016191.1 MGP_CBAJ_G0014303.1 mouse_genomes_project X 75220584 75220791 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016097.1 MGP_CBAJ_G0014209.1 mouse_genomes_project X 52104836 52105013 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097580.1 MGP_CBAJ_G0035911.1 mouse_genomes_project X 174327365 174350633 - MGP_CBAJ_P0097580 Rab9 protein_coding protein_coding MGP_CBAJ_T0097581.1 MGP_CBAJ_G0035911.1 mouse_genomes_project X 174327695 174350412 - MGP_CBAJ_P0097581 Rab9 protein_coding protein_coding MGP_CBAJ_T0097582.1 MGP_CBAJ_G0035911.1 mouse_genomes_project X 174328265 174346201 - MGP_CBAJ_P0097582 Rab9 protein_coding protein_coding MGP_CBAJ_T0095245.1 MGP_CBAJ_G0035248.1 mouse_genomes_project X 16567951 16580646 + MGP_CBAJ_P0095245 Rgn protein_coding protein_coding MGP_CBAJ_T0015975.1 MGP_CBAJ_G0014087.1 mouse_genomes_project X 7835376 7835721 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095426.1 MGP_CBAJ_G0035315.1 mouse_genomes_project X 35244559 35248862 - MGP_CBAJ_P0095426 C1galt1c1 protein_coding protein_coding MGP_CBAJ_T0011059.1 MGP_CBAJ_G0009197.1 mouse_genomes_project X 79180527 79180619 - Gm23556 miRNA miRNA MGP_CBAJ_T0095552.1 MGP_CBAJ_G0035346.1 mouse_genomes_project X 46334246 46367578 - MGP_CBAJ_P0095552 Gm595 protein_coding protein_coding MGP_CBAJ_T0015964.1 MGP_CBAJ_G0014076.1 mouse_genomes_project X 5944295 5944761 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095708.1 MGP_CBAJ_G0035404.1 mouse_genomes_project X 59001629 59116047 - MGP_CBAJ_P0095708 Gm7073 protein_coding protein_coding MGP_CBAJ_T0016135.1 MGP_CBAJ_G0014247.1 mouse_genomes_project X 60964880 60965382 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097482.1 MGP_CBAJ_G0035886.1 mouse_genomes_project X 170374426 170410370 - MGP_CBAJ_P0097482 Syap1 protein_coding protein_coding MGP_CBAJ_T0097483.1 MGP_CBAJ_G0035886.1 mouse_genomes_project X 170375278 170381551 - Syap1 protein_coding retained_intron MGP_CBAJ_T0096844.1 MGP_CBAJ_G0035716.1 mouse_genomes_project X 139212696 139225616 - MGP_CBAJ_P0096844 Xkrx protein_coding protein_coding MGP_CBAJ_T0096845.1 MGP_CBAJ_G0035716.1 mouse_genomes_project X 139214823 139225764 - Xkrx protein_coding processed_transcript MGP_CBAJ_T0018405.1 MGP_CBAJ_G0015527.1 mouse_genomes_project X 139841169 139843070 - B230119M05Rik processed_transcript processed_transcript MGP_CBAJ_T0095750.1 MGP_CBAJ_G0035424.1 mouse_genomes_project X 69824621 69849878 - MGP_CBAJ_P0095750 Ids protein_coding protein_coding MGP_CBAJ_T0095751.1 MGP_CBAJ_G0035424.1 mouse_genomes_project X 69835705 69845804 - MGP_CBAJ_P0095751 Ids protein_coding protein_coding MGP_CBAJ_T0016309.1 MGP_CBAJ_G0014421.1 mouse_genomes_project X 99220392 99220784 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095211.1 MGP_CBAJ_G0035236.1 mouse_genomes_project X 12402874 12527410 - MGP_CBAJ_P0095211 Maob protein_coding protein_coding MGP_CBAJ_T0095212.1 MGP_CBAJ_G0035236.1 mouse_genomes_project X 12403631 12527319 - MGP_CBAJ_P0095212 Maob protein_coding nonsense_mediated_decay MGP_CBAJ_T0095213.1 MGP_CBAJ_G0035236.1 mouse_genomes_project X 12415216 12527319 - MGP_CBAJ_P0095213 Maob protein_coding nonsense_mediated_decay MGP_CBAJ_T0095214.1 MGP_CBAJ_G0035236.1 mouse_genomes_project X 12436474 12527364 - MGP_CBAJ_P0095214 Maob protein_coding nonsense_mediated_decay MGP_CBAJ_T0096215.1 MGP_CBAJ_G0035523.1 mouse_genomes_project X 78043465 78064504 - MGP_CBAJ_P0096215 Pbsn protein_coding protein_coding MGP_CBAJ_T0096216.1 MGP_CBAJ_G0035523.1 mouse_genomes_project X 78043466 78064411 - MGP_CBAJ_P0096216 Pbsn protein_coding protein_coding MGP_CBAJ_T0011064.1 MGP_CBAJ_G0009202.1 mouse_genomes_project X 101050146 101050244 - Gm27554 miRNA miRNA MGP_CBAJ_T0018404.1 MGP_CBAJ_G0015526.1 mouse_genomes_project X 138943802 138946305 - 4930570D08Rik processed_transcript processed_transcript MGP_CBAJ_T0097497.1 MGP_CBAJ_G0035888.1 mouse_genomes_project X 170502086 170504694 - MGP_CBAJ_P0097497 S100g protein_coding protein_coding MGP_CBAJ_T0016489.1 MGP_CBAJ_G0014601.1 mouse_genomes_project X 139896404 139898268 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016638.1 MGP_CBAJ_G0014750.1 mouse_genomes_project X 168642766 168643370 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016042.1 MGP_CBAJ_G0014154.1 mouse_genomes_project X 36718759 36719430 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099691.1 MGP_CBAJ_G0037946.1 mouse_genomes_project X 106860929 106861036 - Gm23378 snRNA snRNA MGP_CBAJ_T0016482.1 MGP_CBAJ_G0014594.1 mouse_genomes_project X 137972623 137973411 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016093.1 MGP_CBAJ_G0014205.1 mouse_genomes_project X 51430195 51430755 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016399.1 MGP_CBAJ_G0014511.1 mouse_genomes_project X 114984288 114986532 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016424.1 MGP_CBAJ_G0014536.1 mouse_genomes_project X 118965917 118968907 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011020.1 MGP_CBAJ_G0009158.1 mouse_genomes_project X 50805767 50805852 - Mir542 miRNA miRNA MGP_CBAJ_T0011075.1 MGP_CBAJ_G0009213.1 mouse_genomes_project X 109383963 109384073 + Gm27428 miRNA miRNA MGP_CBAJ_T0096688.1 MGP_CBAJ_G0035660.1 mouse_genomes_project X 109731460 109857505 + MGP_CBAJ_P0096688 Gm5127 protein_coding protein_coding MGP_CBAJ_T0096689.1 MGP_CBAJ_G0035660.1 mouse_genomes_project X 109731460 109856810 + MGP_CBAJ_P0096689 Gm5127 protein_coding protein_coding MGP_CBAJ_T0016162.1 MGP_CBAJ_G0014274.1 mouse_genomes_project X 67980640 67981898 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096243.1 MGP_CBAJ_G0035535.1 mouse_genomes_project X 81841079 81881790 - MGP_CBAJ_P0096243 4930595M18Rik protein_coding protein_coding MGP_CBAJ_T0097484.1 MGP_CBAJ_G0035887.1 mouse_genomes_project X 170426278 170518629 + MGP_CBAJ_P0097484 Ctps2 protein_coding protein_coding MGP_CBAJ_T0097485.1 MGP_CBAJ_G0035887.1 mouse_genomes_project X 170426285 170449088 + Ctps2 protein_coding processed_transcript MGP_CBAJ_T0097486.1 MGP_CBAJ_G0035887.1 mouse_genomes_project X 170426285 170448763 + Ctps2 protein_coding processed_transcript MGP_CBAJ_T0097487.1 MGP_CBAJ_G0035887.1 mouse_genomes_project X 170429413 170605019 + MGP_CBAJ_P0097487 Ctps2 protein_coding protein_coding MGP_CBAJ_T0097488.1 MGP_CBAJ_G0035887.1 mouse_genomes_project X 170429440 170605202 + MGP_CBAJ_P0097488 Ctps2 protein_coding protein_coding MGP_CBAJ_T0097489.1 MGP_CBAJ_G0035887.1 mouse_genomes_project X 170429577 170605195 + MGP_CBAJ_P0097489 Ctps2 protein_coding protein_coding MGP_CBAJ_T0097490.1 MGP_CBAJ_G0035887.1 mouse_genomes_project X 170429593 170431379 + Ctps2 protein_coding processed_transcript MGP_CBAJ_T0097491.1 MGP_CBAJ_G0035887.1 mouse_genomes_project X 170429678 170605019 + MGP_CBAJ_P0097491 Ctps2 protein_coding protein_coding MGP_CBAJ_T0097492.1 MGP_CBAJ_G0035887.1 mouse_genomes_project X 170429979 170449959 + Ctps2 protein_coding processed_transcript MGP_CBAJ_T0097493.1 MGP_CBAJ_G0035887.1 mouse_genomes_project X 170457217 170466120 + Ctps2 protein_coding processed_transcript MGP_CBAJ_T0097494.1 MGP_CBAJ_G0035887.1 mouse_genomes_project X 170472579 170515294 + Ctps2 protein_coding processed_transcript MGP_CBAJ_T0097495.1 MGP_CBAJ_G0035887.1 mouse_genomes_project X 170472960 170473250 + Ctps2 protein_coding processed_transcript MGP_CBAJ_T0097496.1 MGP_CBAJ_G0035887.1 mouse_genomes_project X 170473066 170607243 + MGP_CBAJ_P0097496 Ctps2 protein_coding protein_coding MGP_CBAJ_T0097463.1 MGP_CBAJ_G0035881.1 mouse_genomes_project X 169115916 169190294 + MGP_CBAJ_P0097463 Rai2 protein_coding protein_coding MGP_CBAJ_T0097464.1 MGP_CBAJ_G0035881.1 mouse_genomes_project X 169116474 169190296 + MGP_CBAJ_P0097464 Rai2 protein_coding protein_coding MGP_CBAJ_T0016520.1 MGP_CBAJ_G0014632.1 mouse_genomes_project X 145170864 145173705 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097311.1 MGP_CBAJ_G0035840.1 mouse_genomes_project X 159231675 159401020 - MGP_CBAJ_P0097311 Shroom2 protein_coding protein_coding MGP_CBAJ_T0097312.1 MGP_CBAJ_G0035840.1 mouse_genomes_project X 159232158 159266487 - Shroom2 protein_coding processed_transcript MGP_CBAJ_T0097313.1 MGP_CBAJ_G0035840.1 mouse_genomes_project X 159232158 159401024 - MGP_CBAJ_P0097313 Shroom2 protein_coding protein_coding MGP_CBAJ_T0097314.1 MGP_CBAJ_G0035840.1 mouse_genomes_project X 159234694 159299325 - Shroom2 protein_coding processed_transcript MGP_CBAJ_T0097315.1 MGP_CBAJ_G0035840.1 mouse_genomes_project X 159240866 159265868 - Shroom2 protein_coding processed_transcript MGP_CBAJ_T0097316.1 MGP_CBAJ_G0035840.1 mouse_genomes_project X 159241075 159266054 - Shroom2 protein_coding processed_transcript MGP_CBAJ_T0016352.1 MGP_CBAJ_G0014464.1 mouse_genomes_project X 106331247 106331472 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097090.1 MGP_CBAJ_G0035799.1 mouse_genomes_project X 147846321 147848116 - Gm15294 protein_coding translated_processed_pseudogene MGP_CBAJ_T0097091.1 MGP_CBAJ_G0035799.1 mouse_genomes_project X 147847385 147847751 - MGP_CBAJ_P0097091 Gm15294 protein_coding protein_coding MGP_CBAJ_T0009263.1 MGP_CBAJ_G0007429.1 mouse_genomes_project X 17293787 17313365 - 4930453H23Rik lincRNA lincRNA MGP_CBAJ_T0009264.1 MGP_CBAJ_G0007429.1 mouse_genomes_project X 17294264 17294522 - 4930453H23Rik lincRNA lincRNA MGP_CBAJ_T0009265.1 MGP_CBAJ_G0007429.1 mouse_genomes_project X 17310109 17313264 - 4930453H23Rik lincRNA lincRNA MGP_CBAJ_T0099688.1 MGP_CBAJ_G0037943.1 mouse_genomes_project X 103504680 103504744 + Gm27510 snRNA snRNA MGP_CBAJ_T0102281.1 MGP_CBAJ_G0040310.1 mouse_genomes_project X 166278156 166283235 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099690.1 MGP_CBAJ_G0037945.1 mouse_genomes_project X 104536542 104536637 - Gm25828 snRNA snRNA MGP_CBAJ_T0016054.1 MGP_CBAJ_G0014166.1 mouse_genomes_project X 39247588 39247756 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096925.1 MGP_CBAJ_G0035740.1 mouse_genomes_project X 141063466 141072137 - MGP_CBAJ_P0096925 protein_coding protein_coding MGP_CBAJ_T0096926.1 MGP_CBAJ_G0035740.1 mouse_genomes_project X 141063466 141066060 - MGP_CBAJ_P0096926 protein_coding protein_coding MGP_CBAJ_T0096927.1 MGP_CBAJ_G0035741.1 mouse_genomes_project X 141092647 141113891 + Gprasp1 protein_coding processed_transcript MGP_CBAJ_T0096929.1 MGP_CBAJ_G0035741.1 mouse_genomes_project X 141092647 141163156 + MGP_CBAJ_P0096929 Gprasp1 protein_coding protein_coding MGP_CBAJ_T0096930.1 MGP_CBAJ_G0035741.1 mouse_genomes_project X 141092647 141163156 + MGP_CBAJ_P0096930 Gprasp1 protein_coding protein_coding MGP_CBAJ_T0096931.1 MGP_CBAJ_G0035741.1 mouse_genomes_project X 141092647 141163156 + MGP_CBAJ_P0096931 Gprasp1 protein_coding protein_coding MGP_CBAJ_T0096932.1 MGP_CBAJ_G0035741.1 mouse_genomes_project X 141092649 141135087 + Gprasp1 protein_coding processed_transcript MGP_CBAJ_T0102242.1 MGP_CBAJ_G0040271.1 mouse_genomes_project X 53944140 53966208 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016644.1 MGP_CBAJ_G0014756.1 mouse_genomes_project X 170282244 170336860 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100968.1 MGP_CBAJ_G0039223.1 mouse_genomes_project X 153290161 153290289 + Snora35 snoRNA snoRNA MGP_CBAJ_T0016294.1 MGP_CBAJ_G0014406.1 mouse_genomes_project X 96582560 96584178 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096619.1 MGP_CBAJ_G0035641.1 mouse_genomes_project X 106939040 107062225 - MGP_CBAJ_P0096619 C77370 protein_coding protein_coding MGP_CBAJ_T0096620.1 MGP_CBAJ_G0035641.1 mouse_genomes_project X 106939041 107062157 - MGP_CBAJ_P0096620 C77370 protein_coding protein_coding MGP_CBAJ_T0096621.1 MGP_CBAJ_G0035641.1 mouse_genomes_project X 106946443 107062184 - MGP_CBAJ_P0096621 C77370 protein_coding protein_coding MGP_CBAJ_T0095125.1 MGP_CBAJ_G0035212.1 mouse_genomes_project X 4612820 4646463 - MGP_CBAJ_P0095125 Cybb protein_coding protein_coding MGP_CBAJ_T0095126.1 MGP_CBAJ_G0035212.1 mouse_genomes_project X 4624192 4646408 - MGP_CBAJ_P0095126 Cybb protein_coding nonsense_mediated_decay MGP_CBAJ_T0095127.1 MGP_CBAJ_G0035212.1 mouse_genomes_project X 4626650 4628800 - Cybb protein_coding retained_intron MGP_CBAJ_T0095128.1 MGP_CBAJ_G0035212.1 mouse_genomes_project X 4634284 4666863 - MGP_CBAJ_P0095128 Cybb protein_coding protein_coding MGP_CBAJ_T0095129.1 MGP_CBAJ_G0035212.1 mouse_genomes_project X 4642127 4646409 - Cybb protein_coding retained_intron MGP_CBAJ_T0011005.1 MGP_CBAJ_G0009143.1 mouse_genomes_project X 38807665 38807792 + Gm44490 miRNA miRNA MGP_CBAJ_T0095533.1 MGP_CBAJ_G0035341.1 mouse_genomes_project X 45969010 45979992 + MGP_CBAJ_P0095533 Rab33a protein_coding protein_coding MGP_CBAJ_T0016285.1 MGP_CBAJ_G0014397.1 mouse_genomes_project X 96185128 96186076 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011037.1 MGP_CBAJ_G0009175.1 mouse_genomes_project X 66030838 66030916 - Mir880 miRNA miRNA MGP_CBAJ_T0096395.1 MGP_CBAJ_G0035581.1 mouse_genomes_project X 99316961 99326495 + MGP_CBAJ_P0096395 Pgr15l protein_coding protein_coding MGP_CBAJ_T0097297.1 MGP_CBAJ_G0035836.1 mouse_genomes_project X 158801533 158848194 + MGP_CBAJ_P0097297 Kdm5c protein_coding protein_coding MGP_CBAJ_T0097298.1 MGP_CBAJ_G0035836.1 mouse_genomes_project X 158801742 158848963 + MGP_CBAJ_P0097298 Kdm5c protein_coding protein_coding MGP_CBAJ_T0097299.1 MGP_CBAJ_G0035836.1 mouse_genomes_project X 158801767 158815266 + Kdm5c protein_coding retained_intron MGP_CBAJ_T0097300.1 MGP_CBAJ_G0035836.1 mouse_genomes_project X 158801785 158848198 + MGP_CBAJ_P0097300 Kdm5c protein_coding protein_coding MGP_CBAJ_T0097301.1 MGP_CBAJ_G0035836.1 mouse_genomes_project X 158844231 158845982 + MGP_CBAJ_P0097301 Kdm5c protein_coding protein_coding MGP_CBAJ_T0097302.1 MGP_CBAJ_G0035836.1 mouse_genomes_project X 158846338 158847822 + MGP_CBAJ_P0097302 Kdm5c protein_coding protein_coding MGP_CBAJ_T0097317.1 MGP_CBAJ_G0035841.1 mouse_genomes_project X 159413479 159426398 + Gpr143 protein_coding processed_transcript MGP_CBAJ_T0097318.1 MGP_CBAJ_G0035841.1 mouse_genomes_project X 159413544 159438664 + MGP_CBAJ_P0097318 Gpr143 protein_coding protein_coding MGP_CBAJ_T0097319.1 MGP_CBAJ_G0035841.1 mouse_genomes_project X 159413576 159422083 + Gpr143 protein_coding retained_intron MGP_CBAJ_T0016569.1 MGP_CBAJ_G0014681.1 mouse_genomes_project X 152151671 152152205 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095837.1 MGP_CBAJ_G0035456.1 mouse_genomes_project X 73262368 73285080 - MGP_CBAJ_P0095837 Haus7 protein_coding protein_coding MGP_CBAJ_T0095838.1 MGP_CBAJ_G0035456.1 mouse_genomes_project X 73262368 73285080 - MGP_CBAJ_P0095838 Haus7 protein_coding protein_coding MGP_CBAJ_T0095839.1 MGP_CBAJ_G0035456.1 mouse_genomes_project X 73262370 73272302 - Haus7 protein_coding processed_transcript MGP_CBAJ_T0016581.1 MGP_CBAJ_G0014693.1 mouse_genomes_project X 156900740 156903171 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100980.1 MGP_CBAJ_G0039235.1 mouse_genomes_project X 175301096 175301214 - Gm26368 snoRNA snoRNA MGP_CBAJ_T0096102.1 MGP_CBAJ_G0035491.1 mouse_genomes_project X 74339207 74341002 - MGP_CBAJ_P0096102 Slc10a3 protein_coding protein_coding MGP_CBAJ_T0096103.1 MGP_CBAJ_G0035491.1 mouse_genomes_project X 74339207 74343233 - MGP_CBAJ_P0096103 Slc10a3 protein_coding protein_coding MGP_CBAJ_T0096104.1 MGP_CBAJ_G0035491.1 mouse_genomes_project X 74339207 74343292 - MGP_CBAJ_P0096104 Slc10a3 protein_coding protein_coding MGP_CBAJ_T0096105.1 MGP_CBAJ_G0035491.1 mouse_genomes_project X 74339207 74343336 - MGP_CBAJ_P0096105 Slc10a3 protein_coding protein_coding MGP_CBAJ_T0096363.1 MGP_CBAJ_G0035572.1 mouse_genomes_project X 97708902 97732526 - MGP_CBAJ_P0096363 Zc4h2 protein_coding protein_coding MGP_CBAJ_T0096364.1 MGP_CBAJ_G0035572.1 mouse_genomes_project X 97708905 97732501 - MGP_CBAJ_P0096364 Zc4h2 protein_coding protein_coding MGP_CBAJ_T0096365.1 MGP_CBAJ_G0035572.1 mouse_genomes_project X 97708908 97732627 - MGP_CBAJ_P0096365 Zc4h2 protein_coding protein_coding MGP_CBAJ_T0102254.1 MGP_CBAJ_G0040283.1 mouse_genomes_project X 78283786 78292991 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015935.1 MGP_CBAJ_G0014047.1 mouse_genomes_project X 230908 232722 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095880.1 MGP_CBAJ_G0035466.1 mouse_genomes_project X 73663750 73671685 - Idh3g protein_coding retained_intron MGP_CBAJ_T0095881.1 MGP_CBAJ_G0035466.1 mouse_genomes_project X 73663750 73671685 - MGP_CBAJ_P0095881 Idh3g protein_coding protein_coding MGP_CBAJ_T0095882.1 MGP_CBAJ_G0035466.1 mouse_genomes_project X 73663830 73665685 - Idh3g protein_coding retained_intron MGP_CBAJ_T0095883.1 MGP_CBAJ_G0035466.1 mouse_genomes_project X 73664457 73665484 - Idh3g protein_coding retained_intron MGP_CBAJ_T0095884.1 MGP_CBAJ_G0035466.1 mouse_genomes_project X 73664823 73665600 - Idh3g protein_coding retained_intron MGP_CBAJ_T0095885.1 MGP_CBAJ_G0035466.1 mouse_genomes_project X 73664861 73671410 - Idh3g protein_coding processed_transcript MGP_CBAJ_T0095886.1 MGP_CBAJ_G0035466.1 mouse_genomes_project X 73665208 73666495 - Idh3g protein_coding retained_intron MGP_CBAJ_T0095887.1 MGP_CBAJ_G0035466.1 mouse_genomes_project X 73665375 73667007 - Idh3g protein_coding retained_intron MGP_CBAJ_T0095888.1 MGP_CBAJ_G0035466.1 mouse_genomes_project X 73665766 73667156 - Idh3g protein_coding processed_transcript MGP_CBAJ_T0096536.1 MGP_CBAJ_G0035613.1 mouse_genomes_project X 103969028 103979316 + MGP_CBAJ_P0096536 Nono protein_coding protein_coding MGP_CBAJ_T0096537.1 MGP_CBAJ_G0035613.1 mouse_genomes_project X 103969265 103994562 + MGP_CBAJ_P0096537 Nono protein_coding protein_coding MGP_CBAJ_T0096538.1 MGP_CBAJ_G0035613.1 mouse_genomes_project X 103969445 103983439 + Nono protein_coding retained_intron MGP_CBAJ_T0096539.1 MGP_CBAJ_G0035613.1 mouse_genomes_project X 103983598 103985339 + Nono protein_coding retained_intron MGP_CBAJ_T0096540.1 MGP_CBAJ_G0035613.1 mouse_genomes_project X 103984313 103988910 + Nono protein_coding retained_intron MGP_CBAJ_T0096541.1 MGP_CBAJ_G0035613.1 mouse_genomes_project X 103985740 103988711 + Nono protein_coding processed_transcript MGP_CBAJ_T0096542.1 MGP_CBAJ_G0035613.1 mouse_genomes_project X 103986830 103988826 + Nono protein_coding retained_intron MGP_CBAJ_T0097343.1 MGP_CBAJ_G0035855.1 mouse_genomes_project X 162048954 162052272 - MGP_CBAJ_P0097343 Sat1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0097344.1 MGP_CBAJ_G0035855.1 mouse_genomes_project X 162048954 162052272 - MGP_CBAJ_P0097344 Sat1 protein_coding protein_coding MGP_CBAJ_T0097345.1 MGP_CBAJ_G0035855.1 mouse_genomes_project X 162049129 162052155 - Sat1 protein_coding retained_intron MGP_CBAJ_T0097346.1 MGP_CBAJ_G0035855.1 mouse_genomes_project X 162049129 162050727 - Sat1 protein_coding retained_intron MGP_CBAJ_T0097347.1 MGP_CBAJ_G0035855.1 mouse_genomes_project X 162049129 162049883 - Sat1 protein_coding retained_intron MGP_CBAJ_T0097348.1 MGP_CBAJ_G0035855.1 mouse_genomes_project X 162049138 162052168 - MGP_CBAJ_P0097348 Sat1 protein_coding protein_coding MGP_CBAJ_T0097349.1 MGP_CBAJ_G0035855.1 mouse_genomes_project X 162051277 162052150 - Sat1 protein_coding retained_intron MGP_CBAJ_T0005503.1 MGP_CBAJ_G0004632.1 mouse_genomes_project X 59137424 59408787 + antisense antisense MGP_CBAJ_T0016043.1 MGP_CBAJ_G0014155.1 mouse_genomes_project X 36724386 36725838 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016235.1 MGP_CBAJ_G0014347.1 mouse_genomes_project X 86294307 86294633 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016362.1 MGP_CBAJ_G0014474.1 mouse_genomes_project X 107260840 107261305 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095721.1 MGP_CBAJ_G0035413.1 mouse_genomes_project X 64160591 64161962 + MGP_CBAJ_P0095721 Ctag2 protein_coding protein_coding MGP_CBAJ_T0097390.1 MGP_CBAJ_G0035867.1 mouse_genomes_project X 166443048 166498341 + MGP_CBAJ_P0097390 Rps6ka3 protein_coding protein_coding MGP_CBAJ_T0097391.1 MGP_CBAJ_G0035867.1 mouse_genomes_project X 166443136 166559851 + MGP_CBAJ_P0097391 Rps6ka3 protein_coding protein_coding MGP_CBAJ_T0097392.1 MGP_CBAJ_G0035867.1 mouse_genomes_project X 166443203 166515869 + MGP_CBAJ_P0097392 Rps6ka3 protein_coding protein_coding MGP_CBAJ_T0097393.1 MGP_CBAJ_G0035867.1 mouse_genomes_project X 166443456 166515959 + MGP_CBAJ_P0097393 Rps6ka3 protein_coding protein_coding MGP_CBAJ_T0097394.1 MGP_CBAJ_G0035867.1 mouse_genomes_project X 166463630 166514349 + MGP_CBAJ_P0097394 Rps6ka3 protein_coding protein_coding MGP_CBAJ_T0097395.1 MGP_CBAJ_G0035867.1 mouse_genomes_project X 166472015 166559858 + MGP_CBAJ_P0097395 Rps6ka3 protein_coding unknown_likely_coding MGP_CBAJ_T0097396.1 MGP_CBAJ_G0035867.1 mouse_genomes_project X 166490096 166518372 + MGP_CBAJ_P0097396 Rps6ka3 protein_coding protein_coding MGP_CBAJ_T0097397.1 MGP_CBAJ_G0035867.1 mouse_genomes_project X 166553927 166555112 + Rps6ka3 protein_coding processed_transcript MGP_CBAJ_T0097398.1 MGP_CBAJ_G0035867.1 mouse_genomes_project X 166554012 166555347 + Rps6ka3 protein_coding retained_intron MGP_CBAJ_T0016404.1 MGP_CBAJ_G0014516.1 mouse_genomes_project X 115943706 115949684 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018426.1 MGP_CBAJ_G0015535.1 mouse_genomes_project X 170231710 170233246 - Gm15201 processed_transcript processed_transcript MGP_CBAJ_T0096205.1 MGP_CBAJ_G0035516.1 mouse_genomes_project X 76437957 76441392 + MGP_CBAJ_P0096205 Cldn34b3 protein_coding protein_coding MGP_CBAJ_T0005528.1 MGP_CBAJ_G0004651.1 mouse_genomes_project X 162495840 162496413 + Gm15156 antisense antisense MGP_CBAJ_T0011013.1 MGP_CBAJ_G0009151.1 mouse_genomes_project X 50451844 50451928 - Mir19b-2 miRNA miRNA MGP_CBAJ_T0101227.1 MGP_CBAJ_G0039375.1 mouse_genomes_project X 142367688 142368010 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0096421.1 MGP_CBAJ_G0035587.1 mouse_genomes_project X 101499928 101512791 + MGP_CBAJ_P0096421 Efnb1 protein_coding protein_coding MGP_CBAJ_T0096422.1 MGP_CBAJ_G0035587.1 mouse_genomes_project X 101501924 101511032 + Efnb1 protein_coding processed_transcript MGP_CBAJ_T0095380.1 MGP_CBAJ_G0035292.1 mouse_genomes_project X 33649982 33651205 + MGP_CBAJ_P0095380 Rnf113a1 protein_coding protein_coding MGP_CBAJ_T0095774.1 MGP_CBAJ_G0035430.1 mouse_genomes_project X 70982573 71006729 + MGP_CBAJ_P0095774 Mtmr1 protein_coding protein_coding MGP_CBAJ_T0095775.1 MGP_CBAJ_G0035430.1 mouse_genomes_project X 70982573 71037191 + MGP_CBAJ_P0095775 Mtmr1 protein_coding protein_coding MGP_CBAJ_T0095776.1 MGP_CBAJ_G0035430.1 mouse_genomes_project X 70982750 71012246 + MGP_CBAJ_P0095776 Mtmr1 protein_coding protein_coding MGP_CBAJ_T0095777.1 MGP_CBAJ_G0035430.1 mouse_genomes_project X 70987649 71006707 + MGP_CBAJ_P0095777 Mtmr1 protein_coding protein_coding MGP_CBAJ_T0095778.1 MGP_CBAJ_G0035430.1 mouse_genomes_project X 70987649 71006707 + MGP_CBAJ_P0095778 Mtmr1 protein_coding protein_coding MGP_CBAJ_T0095779.1 MGP_CBAJ_G0035430.1 mouse_genomes_project X 70987649 71006707 + MGP_CBAJ_P0095779 Mtmr1 protein_coding protein_coding MGP_CBAJ_T0095780.1 MGP_CBAJ_G0035430.1 mouse_genomes_project X 71009149 71010535 + Mtmr1 protein_coding retained_intron MGP_CBAJ_T0095781.1 MGP_CBAJ_G0035430.1 mouse_genomes_project X 71009650 71010876 + Mtmr1 protein_coding retained_intron MGP_CBAJ_T0095782.1 MGP_CBAJ_G0035430.1 mouse_genomes_project X 71011939 71036658 + Mtmr1 protein_coding retained_intron MGP_CBAJ_T0097378.1 MGP_CBAJ_G0035864.1 mouse_genomes_project X 164775083 164831804 + MGP_CBAJ_P0097378 Smpx protein_coding nonsense_mediated_decay MGP_CBAJ_T0097379.1 MGP_CBAJ_G0035864.1 mouse_genomes_project X 164775083 164779186 + MGP_CBAJ_P0097379 Smpx protein_coding protein_coding MGP_CBAJ_T0097380.1 MGP_CBAJ_G0035864.1 mouse_genomes_project X 164775146 164831802 + MGP_CBAJ_P0097380 Smpx protein_coding protein_coding MGP_CBAJ_T0097381.1 MGP_CBAJ_G0035864.1 mouse_genomes_project X 164775300 164831802 + MGP_CBAJ_P0097381 Smpx protein_coding protein_coding MGP_CBAJ_T0097382.1 MGP_CBAJ_G0035864.1 mouse_genomes_project X 164775433 164831427 + MGP_CBAJ_P0097382 Smpx protein_coding nonsense_mediated_decay MGP_CBAJ_T0097383.1 MGP_CBAJ_G0035864.1 mouse_genomes_project X 164778771 164831454 + MGP_CBAJ_P0097383 Smpx protein_coding protein_coding MGP_CBAJ_T0097384.1 MGP_CBAJ_G0035864.1 mouse_genomes_project X 164790302 164831424 + Smpx protein_coding retained_intron MGP_CBAJ_T0097385.1 MGP_CBAJ_G0035864.1 mouse_genomes_project X 164796455 164831496 + Smpx protein_coding retained_intron MGP_CBAJ_T0005533.1 MGP_CBAJ_G0004655.1 mouse_genomes_project X 169336280 169336835 + Gm15202 antisense antisense MGP_CBAJ_T0009316.1 MGP_CBAJ_G0007463.1 mouse_genomes_project X 123855071 123857102 - Gm14929 lincRNA lincRNA MGP_CBAJ_T0016126.1 MGP_CBAJ_G0014238.1 mouse_genomes_project X 59735843 59736996 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095698.1 MGP_CBAJ_G0035401.1 mouse_genomes_project X 58505802 58543786 + MGP_CBAJ_P0095698 F9 protein_coding protein_coding MGP_CBAJ_T0098135.1 MGP_CBAJ_G0036408.1 mouse_genomes_project X 70713541 70713659 + n-R5s8 rRNA rRNA MGP_CBAJ_T0016445.1 MGP_CBAJ_G0014557.1 mouse_genomes_project X 123475121 123486420 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016499.1 MGP_CBAJ_G0014611.1 mouse_genomes_project X 142009991 142011071 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011029.1 MGP_CBAJ_G0009167.1 mouse_genomes_project X 66004224 66004286 - Mir743 miRNA miRNA MGP_CBAJ_T0016142.1 MGP_CBAJ_G0014254.1 mouse_genomes_project X 62304875 62305177 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096801.1 MGP_CBAJ_G0035701.1 mouse_genomes_project X 128188869 128190768 + MGP_CBAJ_P0096801 protein_coding protein_coding MGP_CBAJ_T0096175.1 MGP_CBAJ_G0035508.1 mouse_genomes_project X 75257301 75469450 - MGP_CBAJ_P0096175 F8 protein_coding protein_coding MGP_CBAJ_T0096176.1 MGP_CBAJ_G0035508.1 mouse_genomes_project X 75257305 75467175 - MGP_CBAJ_P0096176 F8 protein_coding protein_coding MGP_CBAJ_T0096177.1 MGP_CBAJ_G0035508.1 mouse_genomes_project X 75430767 75469754 - MGP_CBAJ_P0096177 F8 protein_coding protein_coding MGP_CBAJ_T0102240.1 MGP_CBAJ_G0040269.1 mouse_genomes_project X 43822500 43823271 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0096038.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74235698 74236702 + Taz protein_coding processed_transcript MGP_CBAJ_T0096039.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74235698 74236652 + Taz protein_coding processed_transcript MGP_CBAJ_T0096040.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74236483 74243938 + MGP_CBAJ_P0096040 Taz protein_coding protein_coding MGP_CBAJ_T0096041.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74236536 74239674 + Taz protein_coding retained_intron MGP_CBAJ_T0096042.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74236536 74241822 + Taz protein_coding retained_intron MGP_CBAJ_T0096043.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74236536 74243935 + Taz protein_coding retained_intron MGP_CBAJ_T0096044.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74236536 74243935 + MGP_CBAJ_P0096044 Taz protein_coding protein_coding MGP_CBAJ_T0096045.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74236546 74242066 + Taz protein_coding retained_intron MGP_CBAJ_T0096046.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74236546 74242491 + Taz protein_coding retained_intron MGP_CBAJ_T0096047.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74236548 74243935 + MGP_CBAJ_P0096047 Taz protein_coding protein_coding MGP_CBAJ_T0096048.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74236552 74237756 + Taz protein_coding retained_intron MGP_CBAJ_T0096049.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74236558 74242945 + MGP_CBAJ_P0096049 Taz protein_coding protein_coding MGP_CBAJ_T0096050.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74236575 74238101 + Taz protein_coding retained_intron MGP_CBAJ_T0096051.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74236707 74242631 + Taz protein_coding retained_intron MGP_CBAJ_T0096052.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74236794 74243187 + MGP_CBAJ_P0096052 Taz protein_coding protein_coding MGP_CBAJ_T0096053.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74236868 74243272 + MGP_CBAJ_P0096053 Taz protein_coding protein_coding MGP_CBAJ_T0096054.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74237723 74243135 + MGP_CBAJ_P0096054 Taz protein_coding protein_coding MGP_CBAJ_T0096055.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74241451 74242396 + Taz protein_coding retained_intron MGP_CBAJ_T0096056.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74241806 74243521 + MGP_CBAJ_P0096056 Taz protein_coding nonsense_mediated_decay MGP_CBAJ_T0096057.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74241858 74243675 + MGP_CBAJ_P0096057 Taz protein_coding protein_coding MGP_CBAJ_T0096058.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74242448 74243518 + MGP_CBAJ_P0096058 Taz protein_coding nonsense_mediated_decay MGP_CBAJ_T0096059.1 MGP_CBAJ_G0035484.1 mouse_genomes_project X 74242459 74243468 + Taz protein_coding retained_intron MGP_CBAJ_T0096208.1 MGP_CBAJ_G0035519.1 mouse_genomes_project X 76577503 76582126 + MGP_CBAJ_P0096208 Cldn34b4 protein_coding protein_coding MGP_CBAJ_T0096209.1 MGP_CBAJ_G0035519.1 mouse_genomes_project X 76577605 76582035 + MGP_CBAJ_P0096209 Cldn34b4 protein_coding protein_coding MGP_CBAJ_T0016013.1 MGP_CBAJ_G0014125.1 mouse_genomes_project X 16971980 16972179 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0102236.1 MGP_CBAJ_G0040265.1 mouse_genomes_project X 34236898 34237490 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0095505.1 MGP_CBAJ_G0035333.1 mouse_genomes_project X 45410317 45422969 - MGP_CBAJ_P0095505 Apln protein_coding protein_coding MGP_CBAJ_T0096773.1 MGP_CBAJ_G0035690.1 mouse_genomes_project X 116831385 117416157 + MGP_CBAJ_P0096773 Dach2 protein_coding protein_coding MGP_CBAJ_T0096774.1 MGP_CBAJ_G0035690.1 mouse_genomes_project X 116831397 117411698 + MGP_CBAJ_P0096774 Dach2 protein_coding protein_coding MGP_CBAJ_T0096775.1 MGP_CBAJ_G0035690.1 mouse_genomes_project X 116831451 117415355 + MGP_CBAJ_P0096775 Dach2 protein_coding protein_coding MGP_CBAJ_T0096776.1 MGP_CBAJ_G0035690.1 mouse_genomes_project X 116832127 117319641 + Dach2 protein_coding retained_intron MGP_CBAJ_T0096777.1 MGP_CBAJ_G0035690.1 mouse_genomes_project X 116832132 117414037 + MGP_CBAJ_P0096777 Dach2 protein_coding protein_coding MGP_CBAJ_T0096778.1 MGP_CBAJ_G0035690.1 mouse_genomes_project X 116832132 117415664 + MGP_CBAJ_P0096778 Dach2 protein_coding protein_coding MGP_CBAJ_T0096779.1 MGP_CBAJ_G0035690.1 mouse_genomes_project X 116832513 117079363 + Dach2 protein_coding processed_transcript MGP_CBAJ_T0096780.1 MGP_CBAJ_G0035690.1 mouse_genomes_project X 117273694 117414037 + Dach2 protein_coding processed_transcript MGP_CBAJ_T0096162.1 MGP_CBAJ_G0035506.1 mouse_genomes_project X 75181681 75203229 - MGP_CBAJ_P0096162 Mpp1 protein_coding protein_coding MGP_CBAJ_T0096163.1 MGP_CBAJ_G0035506.1 mouse_genomes_project X 75182596 75203057 - MGP_CBAJ_P0096163 Mpp1 protein_coding protein_coding MGP_CBAJ_T0096164.1 MGP_CBAJ_G0035506.1 mouse_genomes_project X 75183664 75203162 - MGP_CBAJ_P0096164 Mpp1 protein_coding protein_coding MGP_CBAJ_T0096165.1 MGP_CBAJ_G0035506.1 mouse_genomes_project X 75184301 75203067 - MGP_CBAJ_P0096165 Mpp1 protein_coding protein_coding MGP_CBAJ_T0096166.1 MGP_CBAJ_G0035506.1 mouse_genomes_project X 75185513 75203067 - Mpp1 protein_coding processed_transcript MGP_CBAJ_T0096167.1 MGP_CBAJ_G0035506.1 mouse_genomes_project X 75187783 75189796 - Mpp1 protein_coding retained_intron MGP_CBAJ_T0096168.1 MGP_CBAJ_G0035506.1 mouse_genomes_project X 75188009 75203067 - MGP_CBAJ_P0096168 Mpp1 protein_coding protein_coding MGP_CBAJ_T0096169.1 MGP_CBAJ_G0035506.1 mouse_genomes_project X 75193687 75203067 - MGP_CBAJ_P0096169 Mpp1 protein_coding protein_coding MGP_CBAJ_T0096170.1 MGP_CBAJ_G0035506.1 mouse_genomes_project X 75195222 75203199 - Mpp1 protein_coding retained_intron MGP_CBAJ_T0096171.1 MGP_CBAJ_G0035506.1 mouse_genomes_project X 75198045 75203166 - MGP_CBAJ_P0096171 Mpp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0011074.1 MGP_CBAJ_G0009212.1 mouse_genomes_project X 108387306 108387404 - Mir325 miRNA miRNA MGP_CBAJ_T0099726.1 MGP_CBAJ_G0037981.1 mouse_genomes_project X 176619395 176619507 - Gm23197 snRNA snRNA MGP_CBAJ_T0016597.1 MGP_CBAJ_G0014709.1 mouse_genomes_project X 160094576 160095557 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097457.1 MGP_CBAJ_G0035880.1 mouse_genomes_project X 168509794 168628402 + MGP_CBAJ_P0097457 Scml2 protein_coding protein_coding MGP_CBAJ_T0097458.1 MGP_CBAJ_G0035880.1 mouse_genomes_project X 168509794 168628416 + MGP_CBAJ_P0097458 Scml2 protein_coding protein_coding MGP_CBAJ_T0097459.1 MGP_CBAJ_G0035880.1 mouse_genomes_project X 168531928 168628468 + MGP_CBAJ_P0097459 Scml2 protein_coding protein_coding MGP_CBAJ_T0097460.1 MGP_CBAJ_G0035880.1 mouse_genomes_project X 168532238 168625027 + MGP_CBAJ_P0097460 Scml2 protein_coding protein_coding MGP_CBAJ_T0097461.1 MGP_CBAJ_G0035880.1 mouse_genomes_project X 168542887 168622608 + MGP_CBAJ_P0097461 Scml2 protein_coding protein_coding MGP_CBAJ_T0097462.1 MGP_CBAJ_G0035880.1 mouse_genomes_project X 168603063 168608550 + Scml2 protein_coding processed_transcript MGP_CBAJ_T0016479.1 MGP_CBAJ_G0014591.1 mouse_genomes_project X 136980764 136981666 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016132.1 MGP_CBAJ_G0014244.1 mouse_genomes_project X 60544956 60546022 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016278.1 MGP_CBAJ_G0014390.1 mouse_genomes_project X 94311048 94312608 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095832.1 MGP_CBAJ_G0035453.1 mouse_genomes_project X 73163364 73179806 + MGP_CBAJ_P0095832 Zfp275 protein_coding protein_coding MGP_CBAJ_T0095833.1 MGP_CBAJ_G0035453.1 mouse_genomes_project X 73165184 73172564 + Zfp275 protein_coding retained_intron MGP_CBAJ_T0016662.1 MGP_CBAJ_G0014774.1 mouse_genomes_project X 174356369 174357195 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096342.1 MGP_CBAJ_G0035566.1 mouse_genomes_project X 96542671 96545162 + MGP_CBAJ_P0096342 Gspt2 protein_coding protein_coding MGP_CBAJ_T0096343.1 MGP_CBAJ_G0035566.1 mouse_genomes_project X 96542678 96549853 + MGP_CBAJ_P0096343 Gspt2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0100940.1 MGP_CBAJ_G0039195.1 mouse_genomes_project X 75173398 75173516 + Gm25520 snoRNA snoRNA MGP_CBAJ_T0016189.1 MGP_CBAJ_G0014301.1 mouse_genomes_project X 74780463 74780847 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097061.1 MGP_CBAJ_G0035788.1 mouse_genomes_project X 146413982 146425760 + Prps1 protein_coding processed_transcript MGP_CBAJ_T0097062.1 MGP_CBAJ_G0035788.1 mouse_genomes_project X 146413982 146436456 + MGP_CBAJ_P0097062 Prps1 protein_coding protein_coding MGP_CBAJ_T0016012.1 MGP_CBAJ_G0014124.1 mouse_genomes_project X 16896231 16896601 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015971.1 MGP_CBAJ_G0014083.1 mouse_genomes_project X 7183070 7183511 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009317.1 MGP_CBAJ_G0007464.1 mouse_genomes_project X 133650376 133653226 + 4930558G05Rik lincRNA lincRNA MGP_CBAJ_T0095603.1 MGP_CBAJ_G0035367.1 mouse_genomes_project X 50828132 51017648 - MGP_CBAJ_P0095603 Plac1 protein_coding protein_coding MGP_CBAJ_T0095604.1 MGP_CBAJ_G0035367.1 mouse_genomes_project X 50828133 50874513 - MGP_CBAJ_P0095604 Plac1 protein_coding protein_coding MGP_CBAJ_T0095605.1 MGP_CBAJ_G0035367.1 mouse_genomes_project X 50828309 50982954 - MGP_CBAJ_P0095605 Plac1 protein_coding protein_coding MGP_CBAJ_T0016323.1 MGP_CBAJ_G0014435.1 mouse_genomes_project X 103563462 103563745 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096800.1 MGP_CBAJ_G0035700.1 mouse_genomes_project X 126729766 126732602 - MGP_CBAJ_P0096800 Nap1l3 protein_coding protein_coding MGP_CBAJ_T0016166.1 MGP_CBAJ_G0014278.1 mouse_genomes_project X 69946632 69948471 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016366.1 MGP_CBAJ_G0014478.1 mouse_genomes_project X 107922473 107925304 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097555.1 MGP_CBAJ_G0035906.1 mouse_genomes_project X 172917297 173126218 - MGP_CBAJ_P0097555 Glra2 protein_coding protein_coding MGP_CBAJ_T0102252.1 MGP_CBAJ_G0040281.1 mouse_genomes_project X 77914874 77918953 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0095852.1 MGP_CBAJ_G0035460.1 mouse_genomes_project X 73508985 73512716 - MGP_CBAJ_P0095852 Pnck protein_coding protein_coding MGP_CBAJ_T0095853.1 MGP_CBAJ_G0035460.1 mouse_genomes_project X 73508985 73512820 - MGP_CBAJ_P0095853 Pnck protein_coding protein_coding MGP_CBAJ_T0095854.1 MGP_CBAJ_G0035460.1 mouse_genomes_project X 73508986 73513109 - MGP_CBAJ_P0095854 Pnck protein_coding protein_coding MGP_CBAJ_T0095855.1 MGP_CBAJ_G0035460.1 mouse_genomes_project X 73509242 73510823 - Pnck protein_coding retained_intron MGP_CBAJ_T0095856.1 MGP_CBAJ_G0035460.1 mouse_genomes_project X 73510267 73512425 - MGP_CBAJ_P0095856 Pnck protein_coding protein_coding MGP_CBAJ_T0096449.1 MGP_CBAJ_G0035597.1 mouse_genomes_project X 103071901 103084889 + MGP_CBAJ_P0096449 Arr3 protein_coding protein_coding MGP_CBAJ_T0096450.1 MGP_CBAJ_G0035597.1 mouse_genomes_project X 103071927 103080025 + Arr3 protein_coding retained_intron MGP_CBAJ_T0096451.1 MGP_CBAJ_G0035597.1 mouse_genomes_project X 103071948 103079465 + Arr3 protein_coding retained_intron MGP_CBAJ_T0096452.1 MGP_CBAJ_G0035597.1 mouse_genomes_project X 103071959 103080233 + Arr3 protein_coding retained_intron MGP_CBAJ_T0096453.1 MGP_CBAJ_G0035597.1 mouse_genomes_project X 103071966 103084889 + Arr3 protein_coding retained_intron MGP_CBAJ_T0096454.1 MGP_CBAJ_G0035597.1 mouse_genomes_project X 103072051 103078335 + MGP_CBAJ_P0096454 Arr3 protein_coding protein_coding MGP_CBAJ_T0096455.1 MGP_CBAJ_G0035597.1 mouse_genomes_project X 103073028 103084783 + MGP_CBAJ_P0096455 Arr3 protein_coding unknown_likely_coding MGP_CBAJ_T0096456.1 MGP_CBAJ_G0035597.1 mouse_genomes_project X 103078229 103080832 + Arr3 protein_coding retained_intron MGP_CBAJ_T0097333.1 MGP_CBAJ_G0035850.1 mouse_genomes_project X 160447017 160466124 + MGP_CBAJ_P0097333 2210013O21Rik protein_coding protein_coding MGP_CBAJ_T0097334.1 MGP_CBAJ_G0035850.1 mouse_genomes_project X 160447037 160466780 + MGP_CBAJ_P0097334 2210013O21Rik protein_coding protein_coding MGP_CBAJ_T0097335.1 MGP_CBAJ_G0035850.1 mouse_genomes_project X 160447054 160452609 + MGP_CBAJ_P0097335 2210013O21Rik protein_coding protein_coding MGP_CBAJ_T0097336.1 MGP_CBAJ_G0035850.1 mouse_genomes_project X 160447366 160465982 + 2210013O21Rik protein_coding processed_transcript MGP_CBAJ_T0099716.1 MGP_CBAJ_G0037971.1 mouse_genomes_project X 160628792 160628892 - Gm25895 snRNA snRNA MGP_CBAJ_T0100971.1 MGP_CBAJ_G0039226.1 mouse_genomes_project X 158059230 158059336 - Gm24460 snoRNA snoRNA MGP_CBAJ_T0095142.1 MGP_CBAJ_G0035218.1 mouse_genomes_project X 5274591 5438726 - MGP_CBAJ_P0095142 Rpgr protein_coding protein_coding MGP_CBAJ_T0095143.1 MGP_CBAJ_G0035218.1 mouse_genomes_project X 5371112 5438259 - MGP_CBAJ_P0095143 Rpgr protein_coding protein_coding MGP_CBAJ_T0095144.1 MGP_CBAJ_G0035218.1 mouse_genomes_project X 5371112 5438726 - MGP_CBAJ_P0095144 Rpgr protein_coding protein_coding MGP_CBAJ_T0095145.1 MGP_CBAJ_G0035218.1 mouse_genomes_project X 5371112 5438726 - MGP_CBAJ_P0095145 Rpgr protein_coding protein_coding MGP_CBAJ_T0095146.1 MGP_CBAJ_G0035218.1 mouse_genomes_project X 5371268 5438726 - MGP_CBAJ_P0095146 Rpgr protein_coding protein_coding MGP_CBAJ_T0095147.1 MGP_CBAJ_G0035218.1 mouse_genomes_project X 5373677 5438726 - MGP_CBAJ_P0095147 Rpgr protein_coding protein_coding MGP_CBAJ_T0095148.1 MGP_CBAJ_G0035218.1 mouse_genomes_project X 5396531 5438564 - Rpgr protein_coding retained_intron MGP_CBAJ_T0095149.1 MGP_CBAJ_G0035218.1 mouse_genomes_project X 5428870 5438539 - Rpgr protein_coding retained_intron MGP_CBAJ_T0095150.1 MGP_CBAJ_G0035218.1 mouse_genomes_project X 5435368 5438288 - Rpgr protein_coding processed_transcript MGP_CBAJ_T0016317.1 MGP_CBAJ_G0014429.1 mouse_genomes_project X 102081679 102081973 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011019.1 MGP_CBAJ_G0009157.1 mouse_genomes_project X 50804670 50804739 - Mir450-2 miRNA miRNA MGP_CBAJ_T0095291.1 MGP_CBAJ_G0035259.1 mouse_genomes_project X 17002716 17023184 - Uxt protein_coding processed_transcript MGP_CBAJ_T0095292.1 MGP_CBAJ_G0035259.1 mouse_genomes_project X 17012854 17023210 - MGP_CBAJ_P0095292 Uxt protein_coding protein_coding MGP_CBAJ_T0095293.1 MGP_CBAJ_G0035259.1 mouse_genomes_project X 17013115 17023108 - Uxt protein_coding retained_intron MGP_CBAJ_T0095294.1 MGP_CBAJ_G0035259.1 mouse_genomes_project X 17013121 17023193 - Uxt protein_coding processed_transcript MGP_CBAJ_T0095295.1 MGP_CBAJ_G0035259.1 mouse_genomes_project X 17020254 17023179 - Uxt protein_coding retained_intron MGP_CBAJ_T0095296.1 MGP_CBAJ_G0035259.1 mouse_genomes_project X 17022609 17023167 - Uxt protein_coding processed_transcript MGP_CBAJ_T0096199.1 MGP_CBAJ_G0035515.1 mouse_genomes_project X 75882316 75969971 - MGP_CBAJ_P0096199 Pls3 protein_coding protein_coding MGP_CBAJ_T0096200.1 MGP_CBAJ_G0035515.1 mouse_genomes_project X 75882325 75969378 - MGP_CBAJ_P0096200 Pls3 protein_coding protein_coding MGP_CBAJ_T0096201.1 MGP_CBAJ_G0035515.1 mouse_genomes_project X 75882325 75921821 - MGP_CBAJ_P0096201 Pls3 protein_coding protein_coding MGP_CBAJ_T0096202.1 MGP_CBAJ_G0035515.1 mouse_genomes_project X 75882330 75937907 - MGP_CBAJ_P0096202 Pls3 protein_coding protein_coding MGP_CBAJ_T0096203.1 MGP_CBAJ_G0035515.1 mouse_genomes_project X 75883433 75938029 - MGP_CBAJ_P0096203 Pls3 protein_coding protein_coding MGP_CBAJ_T0096204.1 MGP_CBAJ_G0035515.1 mouse_genomes_project X 75968198 75969888 - Pls3 protein_coding processed_transcript MGP_CBAJ_T0016453.1 MGP_CBAJ_G0014565.1 mouse_genomes_project X 125612912 125614502 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016532.1 MGP_CBAJ_G0014644.1 mouse_genomes_project X 147355184 147355400 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016497.1 MGP_CBAJ_G0014609.1 mouse_genomes_project X 141395696 141396416 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011088.1 MGP_CBAJ_G0009226.1 mouse_genomes_project X 151151031 151151102 + Mir3472 miRNA miRNA MGP_CBAJ_T0016426.1 MGP_CBAJ_G0014538.1 mouse_genomes_project X 119146683 119147787 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016338.1 MGP_CBAJ_G0014450.1 mouse_genomes_project X 105834281 105834794 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095714.1 MGP_CBAJ_G0035409.1 mouse_genomes_project X 61232171 61232993 + MGP_CBAJ_P0095714 4931400O07Rik protein_coding protein_coding MGP_CBAJ_T0016175.1 MGP_CBAJ_G0014287.1 mouse_genomes_project X 70553658 70554289 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016438.1 MGP_CBAJ_G0014550.1 mouse_genomes_project X 121830460 121832541 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005510.1 MGP_CBAJ_G0004638.1 mouse_genomes_project X 75656804 75657512 + Gm15384 antisense antisense MGP_CBAJ_T0094912.1 MGP_CBAJ_G0035155.1 mouse_genomes_project X 883559 887808 - MGP_CBAJ_P0094912 Nudt10 protein_coding protein_coding MGP_CBAJ_T0097329.1 MGP_CBAJ_G0035848.1 mouse_genomes_project X 160265383 160266214 + MGP_CBAJ_P0097329 Cypt3 protein_coding protein_coding MGP_CBAJ_T0097330.1 MGP_CBAJ_G0035848.1 mouse_genomes_project X 160265383 160266220 + MGP_CBAJ_P0097330 Cypt3 protein_coding protein_coding MGP_CBAJ_T0099694.1 MGP_CBAJ_G0037949.1 mouse_genomes_project X 108889359 108889471 + Gm23656 snRNA snRNA MGP_CBAJ_T0095711.1 MGP_CBAJ_G0035407.1 mouse_genomes_project X 60416019 60417478 + MGP_CBAJ_P0095711 Ldoc1 protein_coding protein_coding MGP_CBAJ_T0011660.1 MGP_CBAJ_G0009798.1 mouse_genomes_project X 177363800 177363969 + Gm27980 misc_RNA misc_RNA MGP_CBAJ_T0016617.1 MGP_CBAJ_G0014729.1 mouse_genomes_project X 164674006 164674138 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099650.1 MGP_CBAJ_G0037905.1 mouse_genomes_project X 4466394 4466553 + Gm25481 snRNA snRNA MGP_CBAJ_T0016098.1 MGP_CBAJ_G0014210.1 mouse_genomes_project X 53933251 53934131 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009342.1 MGP_CBAJ_G0007480.1 mouse_genomes_project X 175004663 175022387 - Gm15232 lincRNA lincRNA MGP_CBAJ_T0099664.1 MGP_CBAJ_G0037919.1 mouse_genomes_project X 33490502 33490611 - Gm26099 snRNA snRNA MGP_CBAJ_T0016329.1 MGP_CBAJ_G0014441.1 mouse_genomes_project X 104392153 104393033 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100963.1 MGP_CBAJ_G0039218.1 mouse_genomes_project X 140824388 140824502 - snoRNA snoRNA MGP_CBAJ_T0096808.1 MGP_CBAJ_G0035708.1 mouse_genomes_project X 134380287 134852071 + Diaph2 protein_coding retained_intron MGP_CBAJ_T0096809.1 MGP_CBAJ_G0035708.1 mouse_genomes_project X 134380287 135166761 + MGP_CBAJ_P0096809 Diaph2 protein_coding protein_coding MGP_CBAJ_T0096810.1 MGP_CBAJ_G0035708.1 mouse_genomes_project X 134380341 135016647 + Diaph2 protein_coding retained_intron MGP_CBAJ_T0096811.1 MGP_CBAJ_G0035708.1 mouse_genomes_project X 134380350 135159410 + MGP_CBAJ_P0096811 Diaph2 protein_coding protein_coding MGP_CBAJ_T0096812.1 MGP_CBAJ_G0035708.1 mouse_genomes_project X 134380369 135016320 + Diaph2 protein_coding retained_intron MGP_CBAJ_T0096813.1 MGP_CBAJ_G0035708.1 mouse_genomes_project X 134380521 135166764 + MGP_CBAJ_P0096813 Diaph2 protein_coding protein_coding MGP_CBAJ_T0096814.1 MGP_CBAJ_G0035708.1 mouse_genomes_project X 134606704 134681782 + Diaph2 protein_coding processed_transcript MGP_CBAJ_T0011093.1 MGP_CBAJ_G0009231.1 mouse_genomes_project X 153376495 153376593 + Mir1298 miRNA miRNA MGP_CBAJ_T0016092.1 MGP_CBAJ_G0014204.1 mouse_genomes_project X 51094247 51094881 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010987.1 MGP_CBAJ_G0009125.1 mouse_genomes_project X 2010466 2010575 - Mir501 miRNA miRNA MGP_CBAJ_T0100974.1 MGP_CBAJ_G0039229.1 mouse_genomes_project X 164322261 164322393 - Gm25795 snoRNA snoRNA MGP_CBAJ_T0095401.1 MGP_CBAJ_G0035309.1 mouse_genomes_project X 34735197 34747334 + MGP_CBAJ_P0095401 Zbtb33 protein_coding protein_coding MGP_CBAJ_T0095402.1 MGP_CBAJ_G0035309.1 mouse_genomes_project X 34735216 34740089 + MGP_CBAJ_P0095402 Zbtb33 protein_coding protein_coding MGP_CBAJ_T0095403.1 MGP_CBAJ_G0035309.1 mouse_genomes_project X 34735238 34739473 + MGP_CBAJ_P0095403 Zbtb33 protein_coding protein_coding MGP_CBAJ_T0016176.1 MGP_CBAJ_G0014288.1 mouse_genomes_project X 71119997 71120302 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011086.1 MGP_CBAJ_G0009224.1 mouse_genomes_project X 149037256 149037351 - Gm44351 miRNA miRNA MGP_CBAJ_T0095836.1 MGP_CBAJ_G0035455.1 mouse_genomes_project X 73258758 73260398 - MGP_CBAJ_P0095836 Trex2 protein_coding protein_coding MGP_CBAJ_T0016492.1 MGP_CBAJ_G0014604.1 mouse_genomes_project X 140021225 140022087 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095557.1 MGP_CBAJ_G0035348.1 mouse_genomes_project X 46982207 47014816 + MGP_CBAJ_P0095557 Arhgap36 protein_coding protein_coding MGP_CBAJ_T0095558.1 MGP_CBAJ_G0035348.1 mouse_genomes_project X 46988720 47018551 + MGP_CBAJ_P0095558 Arhgap36 protein_coding protein_coding MGP_CBAJ_T0095559.1 MGP_CBAJ_G0035348.1 mouse_genomes_project X 46988847 47018549 + MGP_CBAJ_P0095559 Arhgap36 protein_coding protein_coding MGP_CBAJ_T0095560.1 MGP_CBAJ_G0035348.1 mouse_genomes_project X 47003386 47018549 + MGP_CBAJ_P0095560 Arhgap36 protein_coding unknown_likely_coding MGP_CBAJ_T0095561.1 MGP_CBAJ_G0035348.1 mouse_genomes_project X 47003947 47013557 + Arhgap36 protein_coding processed_transcript MGP_CBAJ_T0095562.1 MGP_CBAJ_G0035348.1 mouse_genomes_project X 47012183 47013762 + Arhgap36 protein_coding processed_transcript MGP_CBAJ_T0016440.1 MGP_CBAJ_G0014552.1 mouse_genomes_project X 121853123 121853327 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015974.1 MGP_CBAJ_G0014086.1 mouse_genomes_project X 7536781 7537131 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099651.1 MGP_CBAJ_G0037906.1 mouse_genomes_project X 7166289 7166396 + Gm26314 snRNA snRNA MGP_CBAJ_T0095289.1 MGP_CBAJ_G0035258.1 mouse_genomes_project X 16994389 17011801 - MGP_CBAJ_P0095289 Elk1 protein_coding protein_coding MGP_CBAJ_T0095290.1 MGP_CBAJ_G0035258.1 mouse_genomes_project X 17000715 17011801 - Elk1 protein_coding retained_intron MGP_CBAJ_T0097282.1 MGP_CBAJ_G0035833.1 mouse_genomes_project X 158551734 158565861 - MGP_CBAJ_P0097282 Ribc1 protein_coding protein_coding MGP_CBAJ_T0097283.1 MGP_CBAJ_G0035833.1 mouse_genomes_project X 158559148 158565836 - Ribc1 protein_coding processed_transcript MGP_CBAJ_T0102260.1 MGP_CBAJ_G0040289.1 mouse_genomes_project X 90546366 90547420 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0096022.1 MGP_CBAJ_G0035482.1 mouse_genomes_project X 74221349 74224969 + MGP_CBAJ_P0096022 protein_coding protein_coding MGP_CBAJ_T0096023.1 MGP_CBAJ_G0035482.1 mouse_genomes_project X 74221395 74223300 + protein_coding processed_transcript MGP_CBAJ_T0096024.1 MGP_CBAJ_G0035482.1 mouse_genomes_project X 74221397 74224969 + MGP_CBAJ_P0096024 protein_coding protein_coding MGP_CBAJ_T0096025.1 MGP_CBAJ_G0035482.1 mouse_genomes_project X 74221493 74222760 + protein_coding retained_intron MGP_CBAJ_T0096026.1 MGP_CBAJ_G0035482.1 mouse_genomes_project X 74221516 74224918 + MGP_CBAJ_P0096026 protein_coding protein_coding MGP_CBAJ_T0096027.1 MGP_CBAJ_G0035482.1 mouse_genomes_project X 74221523 74223462 + protein_coding retained_intron MGP_CBAJ_T0096028.1 MGP_CBAJ_G0035482.1 mouse_genomes_project X 74221946 74224877 + protein_coding retained_intron MGP_CBAJ_T0096029.1 MGP_CBAJ_G0035482.1 mouse_genomes_project X 74221979 74222780 + protein_coding retained_intron MGP_CBAJ_T0096030.1 MGP_CBAJ_G0035482.1 mouse_genomes_project X 74222280 74222950 + protein_coding retained_intron MGP_CBAJ_T0096031.1 MGP_CBAJ_G0035482.1 mouse_genomes_project X 74222374 74223343 + protein_coding retained_intron MGP_CBAJ_T0015961.1 MGP_CBAJ_G0014073.1 mouse_genomes_project X 4100173 4101224 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016481.1 MGP_CBAJ_G0014593.1 mouse_genomes_project X 137794894 137795946 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016100.1 MGP_CBAJ_G0014212.1 mouse_genomes_project X 54353944 54354511 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095038.1 MGP_CBAJ_G0035181.1 mouse_genomes_project X 2729502 2734258 - MGP_CBAJ_P0095038 Pqbp1 protein_coding protein_coding MGP_CBAJ_T0095039.1 MGP_CBAJ_G0035181.1 mouse_genomes_project X 2729566 2733968 - MGP_CBAJ_P0095039 Pqbp1 protein_coding protein_coding MGP_CBAJ_T0095040.1 MGP_CBAJ_G0035181.1 mouse_genomes_project X 2729694 2734188 - MGP_CBAJ_P0095040 Pqbp1 protein_coding protein_coding MGP_CBAJ_T0095041.1 MGP_CBAJ_G0035181.1 mouse_genomes_project X 2729777 2733989 - MGP_CBAJ_P0095041 Pqbp1 protein_coding protein_coding MGP_CBAJ_T0095042.1 MGP_CBAJ_G0035181.1 mouse_genomes_project X 2730863 2733885 - MGP_CBAJ_P0095042 Pqbp1 protein_coding protein_coding MGP_CBAJ_T0016406.1 MGP_CBAJ_G0014518.1 mouse_genomes_project X 116161798 116162706 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096141.1 MGP_CBAJ_G0035499.1 mouse_genomes_project X 74762949 74764211 + MGP_CBAJ_P0096141 protein_coding protein_coding MGP_CBAJ_T0011655.1 MGP_CBAJ_G0009793.1 mouse_genomes_project X 159553155 159553465 - Gm26035 misc_RNA misc_RNA MGP_CBAJ_T0100924.1 MGP_CBAJ_G0039179.1 mouse_genomes_project X 17637116 17637247 - Gm22592 snoRNA snoRNA MGP_CBAJ_T0099719.1 MGP_CBAJ_G0037974.1 mouse_genomes_project X 169503116 169503203 + Gm26317 snRNA snRNA MGP_CBAJ_T0016048.1 MGP_CBAJ_G0014160.1 mouse_genomes_project X 38200511 38200767 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0102283.1 MGP_CBAJ_G0040312.1 mouse_genomes_project X 178090026 178098250 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015942.1 MGP_CBAJ_G0014054.1 mouse_genomes_project X 1898033 1898464 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096480.1 MGP_CBAJ_G0035603.1 mouse_genomes_project X 103585470 103591678 - Slc7a3 protein_coding retained_intron MGP_CBAJ_T0096481.1 MGP_CBAJ_G0035603.1 mouse_genomes_project X 103585482 103591625 - MGP_CBAJ_P0096481 Slc7a3 protein_coding protein_coding MGP_CBAJ_T0096482.1 MGP_CBAJ_G0035603.1 mouse_genomes_project X 103585483 103592287 - MGP_CBAJ_P0096482 Slc7a3 protein_coding protein_coding MGP_CBAJ_T0096483.1 MGP_CBAJ_G0035603.1 mouse_genomes_project X 103585483 103591645 - MGP_CBAJ_P0096483 Slc7a3 protein_coding protein_coding MGP_CBAJ_T0096484.1 MGP_CBAJ_G0035603.1 mouse_genomes_project X 103586067 103590453 - Slc7a3 protein_coding processed_transcript MGP_CBAJ_T0096485.1 MGP_CBAJ_G0035603.1 mouse_genomes_project X 103587859 103588523 - Slc7a3 protein_coding retained_intron MGP_CBAJ_T0096486.1 MGP_CBAJ_G0035603.1 mouse_genomes_project X 103588047 103588749 - Slc7a3 protein_coding retained_intron MGP_CBAJ_T0016540.1 MGP_CBAJ_G0014652.1 mouse_genomes_project X 147843047 147843303 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096975.1 MGP_CBAJ_G0035761.1 mouse_genomes_project X 142432139 142442852 - MGP_CBAJ_P0096975 Rab9b protein_coding protein_coding MGP_CBAJ_T0096821.1 MGP_CBAJ_G0035711.1 mouse_genomes_project X 138935815 138943518 - MGP_CBAJ_P0096821 Tspan6 protein_coding protein_coding MGP_CBAJ_T0096822.1 MGP_CBAJ_G0035711.1 mouse_genomes_project X 138935834 138943383 - MGP_CBAJ_P0096822 Tspan6 protein_coding unknown_likely_coding MGP_CBAJ_T0096823.1 MGP_CBAJ_G0035711.1 mouse_genomes_project X 138937448 138943383 - MGP_CBAJ_P0096823 Tspan6 protein_coding protein_coding MGP_CBAJ_T0096824.1 MGP_CBAJ_G0035711.1 mouse_genomes_project X 138939267 138943383 - MGP_CBAJ_P0096824 Tspan6 protein_coding protein_coding MGP_CBAJ_T0096825.1 MGP_CBAJ_G0035711.1 mouse_genomes_project X 138941464 138943202 - Tspan6 protein_coding processed_transcript MGP_CBAJ_T0096289.1 MGP_CBAJ_G0035553.1 mouse_genomes_project X 93558175 93559210 - MGP_CBAJ_P0096289 Gm8914 protein_coding protein_coding MGP_CBAJ_T0009287.1 MGP_CBAJ_G0007447.1 mouse_genomes_project X 92637630 92638254 + Gm14773 lincRNA lincRNA MGP_CBAJ_T0015949.1 MGP_CBAJ_G0014061.1 mouse_genomes_project X 2895842 2896710 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095725.1 MGP_CBAJ_G0035416.1 mouse_genomes_project X 67023282 67036587 - MGP_CBAJ_P0095725 Gm14692 protein_coding protein_coding MGP_CBAJ_T0095386.1 MGP_CBAJ_G0035298.1 mouse_genomes_project X 34159843 34170018 - MGP_CBAJ_P0095386 protein_coding protein_coding MGP_CBAJ_T0016639.1 MGP_CBAJ_G0014751.1 mouse_genomes_project X 168864222 168865141 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016331.1 MGP_CBAJ_G0014443.1 mouse_genomes_project X 104841875 104842349 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0102238.1 MGP_CBAJ_G0040267.1 mouse_genomes_project X 34440844 34445631 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016573.1 MGP_CBAJ_G0014685.1 mouse_genomes_project X 152451600 152452646 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011012.1 MGP_CBAJ_G0009150.1 mouse_genomes_project X 50451699 50451790 - Mir92-2 miRNA miRNA MGP_CBAJ_T0018339.1 MGP_CBAJ_G0015507.1 mouse_genomes_project X 2359521 2408768 - Gm36995 processed_transcript retained_intron MGP_CBAJ_T0095783.1 MGP_CBAJ_G0035431.1 mouse_genomes_project X 71038054 71114702 - MGP_CBAJ_P0095783 Cd99l2 protein_coding protein_coding MGP_CBAJ_T0095784.1 MGP_CBAJ_G0035431.1 mouse_genomes_project X 71038054 71114498 - MGP_CBAJ_P0095784 Cd99l2 protein_coding protein_coding MGP_CBAJ_T0095785.1 MGP_CBAJ_G0035431.1 mouse_genomes_project X 71038054 71114702 - MGP_CBAJ_P0095785 Cd99l2 protein_coding protein_coding MGP_CBAJ_T0095786.1 MGP_CBAJ_G0035431.1 mouse_genomes_project X 71040616 71114702 - MGP_CBAJ_P0095786 Cd99l2 protein_coding protein_coding MGP_CBAJ_T0095787.1 MGP_CBAJ_G0035431.1 mouse_genomes_project X 71057255 71114502 - Cd99l2 protein_coding retained_intron MGP_CBAJ_T0095788.1 MGP_CBAJ_G0035431.1 mouse_genomes_project X 71113751 71114458 - Cd99l2 protein_coding processed_transcript MGP_CBAJ_T0016583.1 MGP_CBAJ_G0014695.1 mouse_genomes_project X 157155832 157156427 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016629.1 MGP_CBAJ_G0014741.1 mouse_genomes_project X 166809848 166810124 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015997.1 MGP_CBAJ_G0014109.1 mouse_genomes_project X 13403380 13404200 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095506.1 MGP_CBAJ_G0035334.1 mouse_genomes_project X 45509154 45538505 + MGP_CBAJ_P0095506 Xpnpep2 protein_coding protein_coding MGP_CBAJ_T0095507.1 MGP_CBAJ_G0035334.1 mouse_genomes_project X 45509348 45535549 + MGP_CBAJ_P0095507 Xpnpep2 protein_coding protein_coding MGP_CBAJ_T0095508.1 MGP_CBAJ_G0035334.1 mouse_genomes_project X 45509350 45512585 + Xpnpep2 protein_coding processed_transcript MGP_CBAJ_T0095509.1 MGP_CBAJ_G0035334.1 mouse_genomes_project X 45509358 45538194 + MGP_CBAJ_P0095509 Xpnpep2 protein_coding protein_coding MGP_CBAJ_T0095510.1 MGP_CBAJ_G0035334.1 mouse_genomes_project X 45529271 45532685 + Xpnpep2 protein_coding processed_transcript MGP_CBAJ_T0016037.1 MGP_CBAJ_G0014149.1 mouse_genomes_project X 35890516 35890837 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016595.1 MGP_CBAJ_G0014707.1 mouse_genomes_project X 159769508 159770040 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011628.1 MGP_CBAJ_G0009766.1 mouse_genomes_project X 47532891 47533186 + Gm23385 misc_RNA misc_RNA MGP_CBAJ_T0100922.1 MGP_CBAJ_G0039177.1 mouse_genomes_project X 2343124 2343257 - Gm23082 snoRNA snoRNA MGP_CBAJ_T0011653.1 MGP_CBAJ_G0009791.1 mouse_genomes_project X 146619344 146619646 - Gm22025 misc_RNA misc_RNA MGP_CBAJ_T0097013.1 MGP_CBAJ_G0035774.1 mouse_genomes_project X 144959923 144961705 + MGP_CBAJ_P0097013 4933428M09Rik protein_coding protein_coding MGP_CBAJ_T0095828.1 MGP_CBAJ_G0035449.1 mouse_genomes_project X 72898058 72904535 - MGP_CBAJ_P0095828 protein_coding protein_coding MGP_CBAJ_T0095749.1 MGP_CBAJ_G0035423.1 mouse_genomes_project X 69410907 69411586 + MGP_CBAJ_P0095749 protein_coding protein_coding MGP_CBAJ_T0016568.1 MGP_CBAJ_G0014680.1 mouse_genomes_project X 151991962 151992780 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011647.1 MGP_CBAJ_G0009785.1 mouse_genomes_project X 137535944 137536147 + Gm22143 misc_RNA misc_RNA MGP_CBAJ_T0016565.1 MGP_CBAJ_G0014677.1 mouse_genomes_project X 151732892 151733357 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095640.1 MGP_CBAJ_G0035387.1 mouse_genomes_project X 54974531 55036252 + MGP_CBAJ_P0095640 Fhl1 protein_coding protein_coding MGP_CBAJ_T0095641.1 MGP_CBAJ_G0035387.1 mouse_genomes_project X 54974609 55036244 + MGP_CBAJ_P0095641 Fhl1 protein_coding protein_coding MGP_CBAJ_T0095642.1 MGP_CBAJ_G0035387.1 mouse_genomes_project X 54974873 55035141 + MGP_CBAJ_P0095642 Fhl1 protein_coding protein_coding MGP_CBAJ_T0095643.1 MGP_CBAJ_G0035387.1 mouse_genomes_project X 55022351 55036246 + MGP_CBAJ_P0095643 Fhl1 protein_coding protein_coding MGP_CBAJ_T0095644.1 MGP_CBAJ_G0035387.1 mouse_genomes_project X 55022637 55036246 + MGP_CBAJ_P0095644 Fhl1 protein_coding protein_coding MGP_CBAJ_T0095645.1 MGP_CBAJ_G0035387.1 mouse_genomes_project X 55022644 55035494 + MGP_CBAJ_P0095645 Fhl1 protein_coding protein_coding MGP_CBAJ_T0095646.1 MGP_CBAJ_G0035387.1 mouse_genomes_project X 55022733 55032111 + MGP_CBAJ_P0095646 Fhl1 protein_coding protein_coding MGP_CBAJ_T0095647.1 MGP_CBAJ_G0035387.1 mouse_genomes_project X 55029445 55033572 + MGP_CBAJ_P0095647 Fhl1 protein_coding protein_coding MGP_CBAJ_T0095648.1 MGP_CBAJ_G0035387.1 mouse_genomes_project X 55030630 55032161 + MGP_CBAJ_P0095648 Fhl1 protein_coding protein_coding MGP_CBAJ_T0095649.1 MGP_CBAJ_G0035387.1 mouse_genomes_project X 55030903 55032649 + Fhl1 protein_coding processed_transcript MGP_CBAJ_T0016538.1 MGP_CBAJ_G0014650.1 mouse_genomes_project X 147843045 147843316 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097105.1 MGP_CBAJ_G0035807.1 mouse_genomes_project X 149358099 149468583 - MGP_CBAJ_P0097105 Chrdl1 protein_coding protein_coding MGP_CBAJ_T0097106.1 MGP_CBAJ_G0035807.1 mouse_genomes_project X 149358109 149472763 - MGP_CBAJ_P0097106 Chrdl1 protein_coding protein_coding MGP_CBAJ_T0097107.1 MGP_CBAJ_G0035807.1 mouse_genomes_project X 149369599 149472685 - MGP_CBAJ_P0097107 Chrdl1 protein_coding protein_coding MGP_CBAJ_T0097108.1 MGP_CBAJ_G0035807.1 mouse_genomes_project X 149369601 149472397 - MGP_CBAJ_P0097108 Chrdl1 protein_coding protein_coding MGP_CBAJ_T0097109.1 MGP_CBAJ_G0035807.1 mouse_genomes_project X 149372247 149472382 - MGP_CBAJ_P0097109 Chrdl1 protein_coding unknown_likely_coding MGP_CBAJ_T0016116.1 MGP_CBAJ_G0014228.1 mouse_genomes_project X 58556640 58568639 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015943.1 MGP_CBAJ_G0014055.1 mouse_genomes_project X 2306828 2307242 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101219.1 MGP_CBAJ_G0039370.1 mouse_genomes_project X 106614366 106614995 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101220.1 MGP_CBAJ_G0039370.1 mouse_genomes_project X 106614470 106614866 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0096335.1 MGP_CBAJ_G0035565.1 mouse_genomes_project X 96426021 96432694 - MGP_CBAJ_P0096335 Maged1 protein_coding protein_coding MGP_CBAJ_T0096336.1 MGP_CBAJ_G0035565.1 mouse_genomes_project X 96426023 96428383 - Maged1 protein_coding retained_intron MGP_CBAJ_T0096337.1 MGP_CBAJ_G0035565.1 mouse_genomes_project X 96426023 96432541 - Maged1 protein_coding retained_intron MGP_CBAJ_T0096338.1 MGP_CBAJ_G0035565.1 mouse_genomes_project X 96426023 96428112 - Maged1 protein_coding retained_intron MGP_CBAJ_T0096339.1 MGP_CBAJ_G0035565.1 mouse_genomes_project X 96426629 96428432 - Maged1 protein_coding retained_intron MGP_CBAJ_T0096340.1 MGP_CBAJ_G0035565.1 mouse_genomes_project X 96428222 96429374 - Maged1 protein_coding retained_intron MGP_CBAJ_T0096341.1 MGP_CBAJ_G0035565.1 mouse_genomes_project X 96431041 96432554 - Maged1 protein_coding retained_intron MGP_CBAJ_T0011638.1 MGP_CBAJ_G0009776.1 mouse_genomes_project X 106278278 106278359 + Gm27520 misc_RNA misc_RNA MGP_CBAJ_T0016344.1 MGP_CBAJ_G0014456.1 mouse_genomes_project X 106045744 106047548 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016536.1 MGP_CBAJ_G0014648.1 mouse_genomes_project X 147842376 147843349 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016601.1 MGP_CBAJ_G0014713.1 mouse_genomes_project X 160955725 160956324 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100937.1 MGP_CBAJ_G0039192.1 mouse_genomes_project X 73700391 73700456 + Gm23615 snoRNA snoRNA MGP_CBAJ_T0095388.1 MGP_CBAJ_G0035300.1 mouse_genomes_project X 34159848 34170213 - MGP_CBAJ_P0095388 protein_coding protein_coding MGP_CBAJ_T0095827.1 MGP_CBAJ_G0035448.1 mouse_genomes_project X 72898058 72916668 - MGP_CBAJ_P0095827 protein_coding protein_coding MGP_CBAJ_T0018378.1 MGP_CBAJ_G0015523.1 mouse_genomes_project X 104932946 105058219 + Gm14858 processed_transcript processed_transcript MGP_CBAJ_T0018379.1 MGP_CBAJ_G0015523.1 mouse_genomes_project X 104933075 104941247 + Gm14858 processed_transcript processed_transcript MGP_CBAJ_T0016062.1 MGP_CBAJ_G0014174.1 mouse_genomes_project X 41582170 41582565 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016111.1 MGP_CBAJ_G0014223.1 mouse_genomes_project X 56997402 56998831 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016416.1 MGP_CBAJ_G0014528.1 mouse_genomes_project X 117653050 117654403 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016585.1 MGP_CBAJ_G0014697.1 mouse_genomes_project X 157484696 157485355 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095070.1 MGP_CBAJ_G0035192.1 mouse_genomes_project X 3014466 3023975 - MGP_CBAJ_P0095070 Wdr13 protein_coding protein_coding MGP_CBAJ_T0095071.1 MGP_CBAJ_G0035192.1 mouse_genomes_project X 3014468 3024025 - MGP_CBAJ_P0095071 Wdr13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0095072.1 MGP_CBAJ_G0035192.1 mouse_genomes_project X 3014489 3023937 - MGP_CBAJ_P0095072 Wdr13 protein_coding protein_coding MGP_CBAJ_T0095073.1 MGP_CBAJ_G0035192.1 mouse_genomes_project X 3016469 3023990 - MGP_CBAJ_P0095073 Wdr13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0095074.1 MGP_CBAJ_G0035192.1 mouse_genomes_project X 3016573 3023987 - MGP_CBAJ_P0095074 Wdr13 protein_coding protein_coding MGP_CBAJ_T0095075.1 MGP_CBAJ_G0035192.1 mouse_genomes_project X 3016866 3019683 - Wdr13 protein_coding retained_intron MGP_CBAJ_T0095076.1 MGP_CBAJ_G0035192.1 mouse_genomes_project X 3019199 3023986 - Wdr13 protein_coding processed_transcript MGP_CBAJ_T0095077.1 MGP_CBAJ_G0035192.1 mouse_genomes_project X 3020306 3024012 - MGP_CBAJ_P0095077 Wdr13 protein_coding protein_coding MGP_CBAJ_T0095078.1 MGP_CBAJ_G0035192.1 mouse_genomes_project X 3020883 3023677 - Wdr13 protein_coding retained_intron MGP_CBAJ_T0095079.1 MGP_CBAJ_G0035192.1 mouse_genomes_project X 3023282 3024059 - Wdr13 protein_coding processed_transcript MGP_CBAJ_T0095912.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73810338 73830225 - MGP_CBAJ_P0095912 Arhgap4 protein_coding protein_coding MGP_CBAJ_T0095917.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73813248 73830219 - MGP_CBAJ_P0095917 Arhgap4 protein_coding protein_coding MGP_CBAJ_T0095918.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73813254 73830185 - MGP_CBAJ_P0095918 Arhgap4 protein_coding protein_coding MGP_CBAJ_T0095919.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73813428 73830160 - Arhgap4 protein_coding retained_intron MGP_CBAJ_T0095920.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73813428 73830160 - Arhgap4 protein_coding retained_intron MGP_CBAJ_T0095921.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73813428 73830160 - Arhgap4 protein_coding retained_intron MGP_CBAJ_T0095922.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73813428 73830160 - Arhgap4 protein_coding retained_intron MGP_CBAJ_T0095923.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73813428 73830160 - Arhgap4 protein_coding retained_intron MGP_CBAJ_T0095924.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73813428 73830160 - MGP_CBAJ_P0095924 Arhgap4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0095925.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73813428 73830160 - MGP_CBAJ_P0095925 Arhgap4 protein_coding protein_coding MGP_CBAJ_T0095926.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73813434 73830160 - MGP_CBAJ_P0095926 Arhgap4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0095927.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73813572 73830118 - MGP_CBAJ_P0095927 Arhgap4 protein_coding protein_coding MGP_CBAJ_T0095928.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73815307 73816323 - Arhgap4 protein_coding processed_transcript MGP_CBAJ_T0095929.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73815710 73816963 - MGP_CBAJ_P0095929 Arhgap4 protein_coding protein_coding MGP_CBAJ_T0095930.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73815767 73818523 - MGP_CBAJ_P0095930 Arhgap4 protein_coding protein_coding MGP_CBAJ_T0095931.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73818209 73843223 - Arhgap4 protein_coding retained_intron MGP_CBAJ_T0095932.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73818213 73819635 - Arhgap4 protein_coding processed_transcript MGP_CBAJ_T0095933.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73819005 73824547 - MGP_CBAJ_P0095933 Arhgap4 protein_coding protein_coding MGP_CBAJ_T0095934.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73825275 73830187 - Arhgap4 protein_coding processed_transcript MGP_CBAJ_T0095935.1 MGP_CBAJ_G0035470.1 mouse_genomes_project X 73825668 73830182 - MGP_CBAJ_P0095935 Arhgap4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0016276.1 MGP_CBAJ_G0014388.1 mouse_genomes_project X 93643018 93643680 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016385.1 MGP_CBAJ_G0014497.1 mouse_genomes_project X 110351723 110352608 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099657.1 MGP_CBAJ_G0037912.1 mouse_genomes_project X 15712531 15712638 - Gm23678 snRNA snRNA MGP_CBAJ_T0095897.1 MGP_CBAJ_G0035468.1 mouse_genomes_project X 73679419 73723013 - MGP_CBAJ_P0095897 Pdzd4 protein_coding protein_coding MGP_CBAJ_T0095898.1 MGP_CBAJ_G0035468.1 mouse_genomes_project X 73679419 73723013 - MGP_CBAJ_P0095898 Pdzd4 protein_coding protein_coding MGP_CBAJ_T0096955.1 MGP_CBAJ_G0035752.1 mouse_genomes_project X 141678426 141680481 + MGP_CBAJ_P0096955 Wbp5 protein_coding protein_coding MGP_CBAJ_T0096956.1 MGP_CBAJ_G0035752.1 mouse_genomes_project X 141679030 141680481 + MGP_CBAJ_P0096956 Wbp5 protein_coding protein_coding MGP_CBAJ_T0016612.1 MGP_CBAJ_G0014724.1 mouse_genomes_project X 163727331 163727614 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016620.1 MGP_CBAJ_G0014732.1 mouse_genomes_project X 164732845 164733179 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096276.1 MGP_CBAJ_G0035543.1 mouse_genomes_project X 87111576 87115725 + MGP_CBAJ_P0096276 Nr0b1 protein_coding protein_coding MGP_CBAJ_T0095429.1 MGP_CBAJ_G0035317.1 mouse_genomes_project X 36557027 36566907 - MGP_CBAJ_P0095429 Cypt15 protein_coding protein_coding MGP_CBAJ_T0015981.1 MGP_CBAJ_G0014093.1 mouse_genomes_project X 8723507 8724734 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095479.1 MGP_CBAJ_G0035325.1 mouse_genomes_project X 39440699 40144006 - MGP_CBAJ_P0095479 Tenm1 protein_coding protein_coding MGP_CBAJ_T0095480.1 MGP_CBAJ_G0035325.1 mouse_genomes_project X 39440699 40144027 - MGP_CBAJ_P0095480 Tenm1 protein_coding protein_coding MGP_CBAJ_T0095481.1 MGP_CBAJ_G0035325.1 mouse_genomes_project X 39445224 40253558 - MGP_CBAJ_P0095481 Tenm1 protein_coding protein_coding MGP_CBAJ_T0095482.1 MGP_CBAJ_G0035325.1 mouse_genomes_project X 39748873 40420340 - Tenm1 protein_coding retained_intron MGP_CBAJ_T0095483.1 MGP_CBAJ_G0035325.1 mouse_genomes_project X 39833516 40420463 - Tenm1 protein_coding retained_intron MGP_CBAJ_T0095484.1 MGP_CBAJ_G0035325.1 mouse_genomes_project X 40306095 40420340 - Tenm1 protein_coding processed_transcript MGP_CBAJ_T0016074.1 MGP_CBAJ_G0014186.1 mouse_genomes_project X 45725419 45725767 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016354.1 MGP_CBAJ_G0014466.1 mouse_genomes_project X 106466938 106468111 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011035.1 MGP_CBAJ_G0009173.1 mouse_genomes_project X 66027377 66027448 - Mir741 miRNA miRNA MGP_CBAJ_T0096000.1 MGP_CBAJ_G0035479.1 mouse_genomes_project X 74119663 74151875 + MGP_CBAJ_P0096000 Tktl1 protein_coding protein_coding MGP_CBAJ_T0096001.1 MGP_CBAJ_G0035479.1 mouse_genomes_project X 74119694 74140370 + MGP_CBAJ_P0096001 Tktl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0102257.1 MGP_CBAJ_G0040286.1 mouse_genomes_project X 87306315 87307338 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0096787.1 MGP_CBAJ_G0035696.1 mouse_genomes_project X 120875390 120875893 + MGP_CBAJ_P0096787 H2afb3 protein_coding protein_coding MGP_CBAJ_T0016196.1 MGP_CBAJ_G0014308.1 mouse_genomes_project X 76137078 76137516 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011636.1 MGP_CBAJ_G0009774.1 mouse_genomes_project X 106259375 106259443 - Gm27733 misc_RNA misc_RNA MGP_CBAJ_T0097576.1 MGP_CBAJ_G0035910.1 mouse_genomes_project X 174310564 174323253 + MGP_CBAJ_P0097576 Trappc2 protein_coding protein_coding MGP_CBAJ_T0097577.1 MGP_CBAJ_G0035910.1 mouse_genomes_project X 174310766 174321888 + Trappc2 protein_coding retained_intron MGP_CBAJ_T0097578.1 MGP_CBAJ_G0035910.1 mouse_genomes_project X 174310766 174323251 + MGP_CBAJ_P0097578 Trappc2 protein_coding protein_coding MGP_CBAJ_T0097579.1 MGP_CBAJ_G0035910.1 mouse_genomes_project X 174315293 174323253 + MGP_CBAJ_P0097579 Trappc2 protein_coding protein_coding MGP_CBAJ_T0011009.1 MGP_CBAJ_G0009147.1 mouse_genomes_project X 50065390 50065451 - Mir6384 miRNA miRNA MGP_CBAJ_T0016222.1 MGP_CBAJ_G0014334.1 mouse_genomes_project X 80742378 80743063 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095254.1 MGP_CBAJ_G0035251.1 mouse_genomes_project X 16692042 16717247 + MGP_CBAJ_P0095254 Uba1 protein_coding protein_coding MGP_CBAJ_T0095255.1 MGP_CBAJ_G0035251.1 mouse_genomes_project X 16692137 16704419 + Uba1 protein_coding processed_transcript MGP_CBAJ_T0095256.1 MGP_CBAJ_G0035251.1 mouse_genomes_project X 16693143 16703333 + Uba1 protein_coding processed_transcript MGP_CBAJ_T0095257.1 MGP_CBAJ_G0035251.1 mouse_genomes_project X 16697013 16717247 + MGP_CBAJ_P0095257 Uba1 protein_coding protein_coding MGP_CBAJ_T0095258.1 MGP_CBAJ_G0035251.1 mouse_genomes_project X 16712192 16715268 + Uba1 protein_coding processed_transcript MGP_CBAJ_T0095259.1 MGP_CBAJ_G0035251.1 mouse_genomes_project X 16714662 16716273 + Uba1 protein_coding processed_transcript MGP_CBAJ_T0005504.1 MGP_CBAJ_G0004633.1 mouse_genomes_project X 59501071 59505573 + Gm14662 antisense antisense MGP_CBAJ_T0016371.1 MGP_CBAJ_G0014483.1 mouse_genomes_project X 108506822 108507428 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016155.1 MGP_CBAJ_G0014267.1 mouse_genomes_project X 66989537 66992864 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097587.1 MGP_CBAJ_G0035914.1 mouse_genomes_project X 175143451 175145673 - MGP_CBAJ_P0097587 Tmsb4x protein_coding protein_coding MGP_CBAJ_T0097588.1 MGP_CBAJ_G0035914.1 mouse_genomes_project X 175143453 175145507 - MGP_CBAJ_P0097588 Tmsb4x protein_coding protein_coding MGP_CBAJ_T0097589.1 MGP_CBAJ_G0035914.1 mouse_genomes_project X 175143650 175145185 - MGP_CBAJ_P0097589 Tmsb4x protein_coding protein_coding MGP_CBAJ_T0016303.1 MGP_CBAJ_G0014415.1 mouse_genomes_project X 98399355 98399793 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096690.1 MGP_CBAJ_G0035661.1 mouse_genomes_project X 109989804 109993367 - MGP_CBAJ_P0096690 Zcchc5 protein_coding protein_coding MGP_CBAJ_T0096287.1 MGP_CBAJ_G0035551.1 mouse_genomes_project X 93154350 93155025 - MGP_CBAJ_P0096287 1700084M14Rik protein_coding protein_coding MGP_CBAJ_T0099656.1 MGP_CBAJ_G0037911.1 mouse_genomes_project X 15270514 15270621 + Gm22783 snRNA snRNA MGP_CBAJ_T0018344.1 MGP_CBAJ_G0015511.1 mouse_genomes_project X 8505416 8508611 + 5730405O15Rik processed_transcript processed_transcript MGP_CBAJ_T0018345.1 MGP_CBAJ_G0015511.1 mouse_genomes_project X 8505452 8508698 + 5730405O15Rik processed_transcript processed_transcript MGP_CBAJ_T0095465.1 MGP_CBAJ_G0035322.1 mouse_genomes_project X 39038543 39176391 + MGP_CBAJ_P0095465 Stag2 protein_coding protein_coding MGP_CBAJ_T0095466.1 MGP_CBAJ_G0035322.1 mouse_genomes_project X 39038610 39176381 + MGP_CBAJ_P0095466 Stag2 protein_coding protein_coding MGP_CBAJ_T0095467.1 MGP_CBAJ_G0035322.1 mouse_genomes_project X 39038739 39102215 + Stag2 protein_coding retained_intron MGP_CBAJ_T0095468.1 MGP_CBAJ_G0035322.1 mouse_genomes_project X 39038881 39095765 + MGP_CBAJ_P0095468 Stag2 protein_coding protein_coding MGP_CBAJ_T0095469.1 MGP_CBAJ_G0035322.1 mouse_genomes_project X 39039352 39100954 + Stag2 protein_coding processed_transcript MGP_CBAJ_T0095470.1 MGP_CBAJ_G0035322.1 mouse_genomes_project X 39039655 39176391 + MGP_CBAJ_P0095470 Stag2 protein_coding protein_coding MGP_CBAJ_T0095471.1 MGP_CBAJ_G0035322.1 mouse_genomes_project X 39039968 39095768 + MGP_CBAJ_P0095471 Stag2 protein_coding protein_coding MGP_CBAJ_T0095472.1 MGP_CBAJ_G0035322.1 mouse_genomes_project X 39041134 39110564 + MGP_CBAJ_P0095472 Stag2 protein_coding protein_coding MGP_CBAJ_T0016659.1 MGP_CBAJ_G0014771.1 mouse_genomes_project X 174066603 174067002 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016647.1 MGP_CBAJ_G0014759.1 mouse_genomes_project X 170419799 170420199 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016072.1 MGP_CBAJ_G0014184.1 mouse_genomes_project X 44806162 44807167 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100941.1 MGP_CBAJ_G0039196.1 mouse_genomes_project X 75980693 75980820 + Gm23320 snoRNA snoRNA MGP_CBAJ_T0009315.1 MGP_CBAJ_G0007462.1 mouse_genomes_project X 121451317 121451686 + Gm28579 lincRNA lincRNA MGP_CBAJ_T0095396.1 MGP_CBAJ_G0035306.1 mouse_genomes_project X 34592176 34600724 - MGP_CBAJ_P0095396 Rhox11 protein_coding protein_coding MGP_CBAJ_T0016070.1 MGP_CBAJ_G0014182.1 mouse_genomes_project X 44724399 44725301 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016516.1 MGP_CBAJ_G0014628.1 mouse_genomes_project X 144250411 144251654 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011052.1 MGP_CBAJ_G0009190.1 mouse_genomes_project X 72269081 72269188 - Mir767 miRNA miRNA MGP_CBAJ_T0097104.1 MGP_CBAJ_G0035806.1 mouse_genomes_project X 149180764 149185468 + MGP_CBAJ_P0097104 Rgag1 protein_coding protein_coding MGP_CBAJ_T0016615.1 MGP_CBAJ_G0014727.1 mouse_genomes_project X 164598450 164600220 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010991.1 MGP_CBAJ_G0009129.1 mouse_genomes_project X 2632348 2632469 + Mir1198 miRNA miRNA MGP_CBAJ_T0097022.1 MGP_CBAJ_G0035776.1 mouse_genomes_project X 145142549 145148743 + MGP_CBAJ_P0097022 Trap1a protein_coding protein_coding MGP_CBAJ_T0016249.1 MGP_CBAJ_G0014361.1 mouse_genomes_project X 89613333 89613644 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097145.1 MGP_CBAJ_G0035813.1 mouse_genomes_project X 150780388 151242098 + MGP_CBAJ_P0097145 Zcchc16 protein_coding protein_coding MGP_CBAJ_T0097146.1 MGP_CBAJ_G0035813.1 mouse_genomes_project X 151239187 151240945 + MGP_CBAJ_P0097146 Zcchc16 protein_coding protein_coding MGP_CBAJ_T0016144.1 MGP_CBAJ_G0014256.1 mouse_genomes_project X 63838951 63839809 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095440.1 MGP_CBAJ_G0035320.1 mouse_genomes_project X 38632592 38652225 - MGP_CBAJ_P0095440 Thoc2 protein_coding protein_coding MGP_CBAJ_T0095441.1 MGP_CBAJ_G0035320.1 mouse_genomes_project X 38634711 38652599 - MGP_CBAJ_P0095441 Thoc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0095442.1 MGP_CBAJ_G0035320.1 mouse_genomes_project X 38635085 38644588 - MGP_CBAJ_P0095442 Thoc2 protein_coding protein_coding MGP_CBAJ_T0095443.1 MGP_CBAJ_G0035320.1 mouse_genomes_project X 38640368 38761509 - MGP_CBAJ_P0095443 Thoc2 protein_coding protein_coding MGP_CBAJ_T0095444.1 MGP_CBAJ_G0035320.1 mouse_genomes_project X 38640396 38645076 - MGP_CBAJ_P0095444 Thoc2 protein_coding protein_coding MGP_CBAJ_T0095445.1 MGP_CBAJ_G0035320.1 mouse_genomes_project X 38640408 38644740 - MGP_CBAJ_P0095445 Thoc2 protein_coding protein_coding MGP_CBAJ_T0095446.1 MGP_CBAJ_G0035320.1 mouse_genomes_project X 38641580 38651694 - Thoc2 protein_coding processed_transcript MGP_CBAJ_T0095447.1 MGP_CBAJ_G0035320.1 mouse_genomes_project X 38649982 38652301 - Thoc2 protein_coding retained_intron MGP_CBAJ_T0095448.1 MGP_CBAJ_G0035320.1 mouse_genomes_project X 38652176 38703474 - Thoc2 protein_coding processed_transcript MGP_CBAJ_T0095449.1 MGP_CBAJ_G0035320.1 mouse_genomes_project X 38652572 38670264 - Thoc2 protein_coding retained_intron MGP_CBAJ_T0095450.1 MGP_CBAJ_G0035320.1 mouse_genomes_project X 38661328 38670379 - Thoc2 protein_coding retained_intron MGP_CBAJ_T0095451.1 MGP_CBAJ_G0035320.1 mouse_genomes_project X 38701112 38761539 - Thoc2 protein_coding retained_intron MGP_CBAJ_T0095452.1 MGP_CBAJ_G0035320.1 mouse_genomes_project X 38704644 38761524 - MGP_CBAJ_P0095452 Thoc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0095453.1 MGP_CBAJ_G0035320.1 mouse_genomes_project X 38720555 38770114 - MGP_CBAJ_P0095453 Thoc2 protein_coding protein_coding MGP_CBAJ_T0095454.1 MGP_CBAJ_G0035320.1 mouse_genomes_project X 38720559 38745681 - MGP_CBAJ_P0095454 Thoc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0095455.1 MGP_CBAJ_G0035320.1 mouse_genomes_project X 38728076 38747136 - Thoc2 protein_coding retained_intron MGP_CBAJ_T0016671.1 MGP_CBAJ_G0014783.1 mouse_genomes_project X 176578291 176578624 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097181.1 MGP_CBAJ_G0035821.1 mouse_genomes_project X 157006057 157031019 + MGP_CBAJ_P0097181 Alas2 protein_coding protein_coding MGP_CBAJ_T0097182.1 MGP_CBAJ_G0035821.1 mouse_genomes_project X 157006141 157031003 + MGP_CBAJ_P0097182 Alas2 protein_coding protein_coding MGP_CBAJ_T0097183.1 MGP_CBAJ_G0035821.1 mouse_genomes_project X 157012719 157016266 + Alas2 protein_coding retained_intron MGP_CBAJ_T0097184.1 MGP_CBAJ_G0035821.1 mouse_genomes_project X 157026770 157031003 + Alas2 protein_coding processed_transcript MGP_CBAJ_T0094967.1 MGP_CBAJ_G0035171.1 mouse_genomes_project X 2511094 2528622 + MGP_CBAJ_P0094967 Gpkow protein_coding protein_coding MGP_CBAJ_T0094968.1 MGP_CBAJ_G0035171.1 mouse_genomes_project X 2520580 2527362 + MGP_CBAJ_P0094968 Gpkow protein_coding protein_coding MGP_CBAJ_T0094969.1 MGP_CBAJ_G0035171.1 mouse_genomes_project X 2522928 2527551 + Gpkow protein_coding retained_intron MGP_CBAJ_T0016030.1 MGP_CBAJ_G0014142.1 mouse_genomes_project X 33250302 33250459 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011053.1 MGP_CBAJ_G0009191.1 mouse_genomes_project X 72271177 72271257 - Mir105 miRNA miRNA MGP_CBAJ_T0016651.1 MGP_CBAJ_G0014763.1 mouse_genomes_project X 171075486 171076971 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096728.1 MGP_CBAJ_G0035673.1 mouse_genomes_project X 112316764 112328319 - MGP_CBAJ_P0096728 Hmgn5 protein_coding protein_coding MGP_CBAJ_T0096839.1 MGP_CBAJ_G0035715.1 mouse_genomes_project X 139141595 139173125 - MGP_CBAJ_P0096839 Nox1 protein_coding protein_coding MGP_CBAJ_T0096840.1 MGP_CBAJ_G0035715.1 mouse_genomes_project X 139142226 139173036 - MGP_CBAJ_P0096840 Nox1 protein_coding protein_coding MGP_CBAJ_T0096841.1 MGP_CBAJ_G0035715.1 mouse_genomes_project X 139142318 139172979 - MGP_CBAJ_P0096841 Nox1 protein_coding protein_coding MGP_CBAJ_T0096842.1 MGP_CBAJ_G0035715.1 mouse_genomes_project X 139167460 139302846 - MGP_CBAJ_P0096842 Nox1 protein_coding protein_coding MGP_CBAJ_T0096843.1 MGP_CBAJ_G0035715.1 mouse_genomes_project X 139167460 139200309 - MGP_CBAJ_P0096843 Nox1 protein_coding protein_coding MGP_CBAJ_T0016319.1 MGP_CBAJ_G0014431.1 mouse_genomes_project X 102579061 102579383 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095634.1 MGP_CBAJ_G0035384.1 mouse_genomes_project X 54769192 54778221 - MGP_CBAJ_P0095634 Gm648 protein_coding protein_coding MGP_CBAJ_T0095675.1 MGP_CBAJ_G0035395.1 mouse_genomes_project X 55692290 55701738 - MGP_CBAJ_P0095675 Rbmx protein_coding nonsense_mediated_decay MGP_CBAJ_T0095676.1 MGP_CBAJ_G0035395.1 mouse_genomes_project X 55695113 55701719 - MGP_CBAJ_P0095676 Rbmx protein_coding protein_coding MGP_CBAJ_T0095677.1 MGP_CBAJ_G0035395.1 mouse_genomes_project X 55695117 55701793 - MGP_CBAJ_P0095677 Rbmx protein_coding protein_coding MGP_CBAJ_T0095678.1 MGP_CBAJ_G0035395.1 mouse_genomes_project X 55695671 55701777 - MGP_CBAJ_P0095678 Rbmx protein_coding protein_coding MGP_CBAJ_T0095679.1 MGP_CBAJ_G0035395.1 mouse_genomes_project X 55696780 55701716 - MGP_CBAJ_P0095679 Rbmx protein_coding unknown_likely_coding MGP_CBAJ_T0095680.1 MGP_CBAJ_G0035395.1 mouse_genomes_project X 55698899 55701554 - MGP_CBAJ_P0095680 Rbmx protein_coding protein_coding MGP_CBAJ_T0095156.1 MGP_CBAJ_G0035221.1 mouse_genomes_project X 5977162 5978608 + Mid1ip1 protein_coding processed_transcript MGP_CBAJ_T0095157.1 MGP_CBAJ_G0035221.1 mouse_genomes_project X 5977168 5980545 + MGP_CBAJ_P0095157 Mid1ip1 protein_coding protein_coding MGP_CBAJ_T0095158.1 MGP_CBAJ_G0035221.1 mouse_genomes_project X 5979550 5981851 + MGP_CBAJ_P0095158 Mid1ip1 protein_coding protein_coding MGP_CBAJ_T0095159.1 MGP_CBAJ_G0035221.1 mouse_genomes_project X 5979550 5981851 + MGP_CBAJ_P0095159 Mid1ip1 protein_coding protein_coding MGP_CBAJ_T0095160.1 MGP_CBAJ_G0035221.1 mouse_genomes_project X 5979628 5980545 + MGP_CBAJ_P0095160 Mid1ip1 protein_coding protein_coding MGP_CBAJ_T0095619.1 MGP_CBAJ_G0035375.1 mouse_genomes_project X 51572427 51587868 + MGP_CBAJ_P0095619 4930502E18Rik protein_coding protein_coding MGP_CBAJ_T0096559.1 MGP_CBAJ_G0035618.1 mouse_genomes_project X 104399435 104408369 + MGP_CBAJ_P0096559 8030474K03Rik protein_coding protein_coding MGP_CBAJ_T0016178.1 MGP_CBAJ_G0014290.1 mouse_genomes_project X 72383887 72384223 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095373.1 MGP_CBAJ_G0035288.1 mouse_genomes_project X 33537025 33557501 - MGP_CBAJ_P0095373 Upf3b protein_coding protein_coding MGP_CBAJ_T0095374.1 MGP_CBAJ_G0035288.1 mouse_genomes_project X 33541023 33549870 - MGP_CBAJ_P0095374 Upf3b protein_coding protein_coding MGP_CBAJ_T0095375.1 MGP_CBAJ_G0035288.1 mouse_genomes_project X 33542797 33557501 - Upf3b protein_coding processed_transcript MGP_CBAJ_T0096233.1 MGP_CBAJ_G0035531.1 mouse_genomes_project X 78986107 78987746 + MGP_CBAJ_P0096233 Fam47c protein_coding protein_coding MGP_CBAJ_T0016379.1 MGP_CBAJ_G0014491.1 mouse_genomes_project X 109763566 109763859 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016353.1 MGP_CBAJ_G0014465.1 mouse_genomes_project X 106409341 106409907 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015967.1 MGP_CBAJ_G0014079.1 mouse_genomes_project X 6281604 6282097 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016658.1 MGP_CBAJ_G0014770.1 mouse_genomes_project X 173911710 173913722 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016394.1 MGP_CBAJ_G0014506.1 mouse_genomes_project X 112433872 112434756 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095796.1 MGP_CBAJ_G0035435.1 mouse_genomes_project X 71602734 71619920 + MGP_CBAJ_P0095796 Gm1141 protein_coding protein_coding MGP_CBAJ_T0095797.1 MGP_CBAJ_G0035435.1 mouse_genomes_project X 71608401 71615975 + MGP_CBAJ_P0095797 Gm1141 protein_coding protein_coding MGP_CBAJ_T0016146.1 MGP_CBAJ_G0014258.1 mouse_genomes_project X 64054096 64054999 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016626.1 MGP_CBAJ_G0014738.1 mouse_genomes_project X 166272062 166272808 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016454.1 MGP_CBAJ_G0014566.1 mouse_genomes_project X 125692195 125692842 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011090.1 MGP_CBAJ_G0009228.1 mouse_genomes_project X 153299230 153299338 + Mir764 miRNA miRNA MGP_CBAJ_T0016605.1 MGP_CBAJ_G0014717.1 mouse_genomes_project X 162010303 162010933 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097387.1 MGP_CBAJ_G0035866.1 mouse_genomes_project X 164894440 165143504 - MGP_CBAJ_P0097387 Cnksr2 protein_coding protein_coding MGP_CBAJ_T0097388.1 MGP_CBAJ_G0035866.1 mouse_genomes_project X 164905747 165143504 - MGP_CBAJ_P0097388 Cnksr2 protein_coding protein_coding MGP_CBAJ_T0097389.1 MGP_CBAJ_G0035866.1 mouse_genomes_project X 164932588 164944107 - Cnksr2 protein_coding retained_intron MGP_CBAJ_T0016277.1 MGP_CBAJ_G0014389.1 mouse_genomes_project X 94115756 94115932 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096965.1 MGP_CBAJ_G0035758.1 mouse_genomes_project X 142290278 142301047 - MGP_CBAJ_P0096965 protein_coding protein_coding MGP_CBAJ_T0096966.1 MGP_CBAJ_G0035758.1 mouse_genomes_project X 142293582 142299876 - MGP_CBAJ_P0096966 protein_coding protein_coding MGP_CBAJ_T0096967.1 MGP_CBAJ_G0035758.1 mouse_genomes_project X 142293584 142302318 - MGP_CBAJ_P0096967 protein_coding protein_coding MGP_CBAJ_T0096968.1 MGP_CBAJ_G0035758.1 mouse_genomes_project X 142294880 142300664 - protein_coding processed_transcript MGP_CBAJ_T0016088.1 MGP_CBAJ_G0014200.1 mouse_genomes_project X 49481954 49483028 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096612.1 MGP_CBAJ_G0035638.1 mouse_genomes_project X 106453930 106455015 + MGP_CBAJ_P0096612 Zcchc13 protein_coding protein_coding MGP_CBAJ_T0096611.1 MGP_CBAJ_G0035637.1 mouse_genomes_project X 106213216 106279038 + MGP_CBAJ_P0096611 Gm26992 protein_coding protein_coding MGP_CBAJ_T0016548.1 MGP_CBAJ_G0014660.1 mouse_genomes_project X 148446640 148446850 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096120.1 MGP_CBAJ_G0035494.1 mouse_genomes_project X 74381857 74408639 - MGP_CBAJ_P0096120 G6pdx protein_coding protein_coding MGP_CBAJ_T0096121.1 MGP_CBAJ_G0035494.1 mouse_genomes_project X 74383233 74408321 - MGP_CBAJ_P0096121 G6pdx protein_coding protein_coding MGP_CBAJ_T0096128.1 MGP_CBAJ_G0035494.1 mouse_genomes_project X 74407131 74408325 - G6pdx protein_coding retained_intron MGP_CBAJ_T0096732.1 MGP_CBAJ_G0035675.1 mouse_genomes_project X 112509856 112511679 + MGP_CBAJ_P0096732 Gm6377 protein_coding protein_coding MGP_CBAJ_T0096733.1 MGP_CBAJ_G0035675.1 mouse_genomes_project X 112509858 112513540 + MGP_CBAJ_P0096733 Gm6377 protein_coding protein_coding MGP_CBAJ_T0096032.1 MGP_CBAJ_G0035483.1 mouse_genomes_project X 74225049 74235523 - MGP_CBAJ_P0096032 Dnase1l1 protein_coding protein_coding MGP_CBAJ_T0096033.1 MGP_CBAJ_G0035483.1 mouse_genomes_project X 74225050 74236124 - MGP_CBAJ_P0096033 Dnase1l1 protein_coding protein_coding MGP_CBAJ_T0096034.1 MGP_CBAJ_G0035483.1 mouse_genomes_project X 74225151 74235385 - MGP_CBAJ_P0096034 Dnase1l1 protein_coding protein_coding MGP_CBAJ_T0096035.1 MGP_CBAJ_G0035483.1 mouse_genomes_project X 74225805 74235462 - MGP_CBAJ_P0096035 Dnase1l1 protein_coding protein_coding MGP_CBAJ_T0096036.1 MGP_CBAJ_G0035483.1 mouse_genomes_project X 74226200 74230671 - Dnase1l1 protein_coding retained_intron MGP_CBAJ_T0096037.1 MGP_CBAJ_G0035483.1 mouse_genomes_project X 74230609 74235413 - Dnase1l1 protein_coding retained_intron MGP_CBAJ_T0011047.1 MGP_CBAJ_G0009185.1 mouse_genomes_project X 67341902 67341980 - Mir547 miRNA miRNA MGP_CBAJ_T0016239.1 MGP_CBAJ_G0014351.1 mouse_genomes_project X 86678034 86678463 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101221.1 MGP_CBAJ_G0039371.1 mouse_genomes_project X 107922452 107925351 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101222.1 MGP_CBAJ_G0039371.1 mouse_genomes_project X 107922473 107925301 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0097326.1 MGP_CBAJ_G0035846.1 mouse_genomes_project X 159910252 160059248 + MGP_CBAJ_P0097326 Klf8 protein_coding protein_coding MGP_CBAJ_T0097327.1 MGP_CBAJ_G0035846.1 mouse_genomes_project X 160058956 160084355 + MGP_CBAJ_P0097327 Klf8 protein_coding protein_coding MGP_CBAJ_T0100948.1 MGP_CBAJ_G0039203.1 mouse_genomes_project X 96337506 96337616 - Gm24595 snoRNA snoRNA MGP_CBAJ_T0095857.1 MGP_CBAJ_G0035461.1 mouse_genomes_project X 73530056 73539414 + MGP_CBAJ_P0095857 Slc6a8 protein_coding protein_coding MGP_CBAJ_T0095858.1 MGP_CBAJ_G0035461.1 mouse_genomes_project X 73530613 73538199 + MGP_CBAJ_P0095858 Slc6a8 protein_coding protein_coding MGP_CBAJ_T0095859.1 MGP_CBAJ_G0035461.1 mouse_genomes_project X 73530695 73539417 + MGP_CBAJ_P0095859 Slc6a8 protein_coding protein_coding MGP_CBAJ_T0095860.1 MGP_CBAJ_G0035461.1 mouse_genomes_project X 73530825 73534233 + Slc6a8 protein_coding retained_intron MGP_CBAJ_T0095861.1 MGP_CBAJ_G0035461.1 mouse_genomes_project X 73532413 73534252 + MGP_CBAJ_P0095861 Slc6a8 protein_coding protein_coding MGP_CBAJ_T0095862.1 MGP_CBAJ_G0035461.1 mouse_genomes_project X 73533753 73539414 + MGP_CBAJ_P0095862 Slc6a8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0095863.1 MGP_CBAJ_G0035461.1 mouse_genomes_project X 73533966 73536676 + Slc6a8 protein_coding retained_intron MGP_CBAJ_T0095864.1 MGP_CBAJ_G0035461.1 mouse_genomes_project X 73535061 73538008 + Slc6a8 protein_coding retained_intron MGP_CBAJ_T0095865.1 MGP_CBAJ_G0035461.1 mouse_genomes_project X 73535785 73536907 + Slc6a8 protein_coding processed_transcript MGP_CBAJ_T0095866.1 MGP_CBAJ_G0035461.1 mouse_genomes_project X 73535800 73536823 + Slc6a8 protein_coding retained_intron MGP_CBAJ_T0095867.1 MGP_CBAJ_G0035461.1 mouse_genomes_project X 73535800 73536910 + Slc6a8 protein_coding retained_intron MGP_CBAJ_T0097595.1 MGP_CBAJ_G0035916.1 mouse_genomes_project X 175239565 175266604 - MGP_CBAJ_P0097595 Tlr7 protein_coding protein_coding MGP_CBAJ_T0097596.1 MGP_CBAJ_G0035916.1 mouse_genomes_project X 175239567 175266634 - MGP_CBAJ_P0097596 Tlr7 protein_coding protein_coding MGP_CBAJ_T0097597.1 MGP_CBAJ_G0035916.1 mouse_genomes_project X 175239850 175266573 - MGP_CBAJ_P0097597 Tlr7 protein_coding protein_coding MGP_CBAJ_T0097598.1 MGP_CBAJ_G0035916.1 mouse_genomes_project X 175242978 175266567 - MGP_CBAJ_P0097598 Tlr7 protein_coding protein_coding MGP_CBAJ_T0097599.1 MGP_CBAJ_G0035916.1 mouse_genomes_project X 175242992 175266586 - MGP_CBAJ_P0097599 Tlr7 protein_coding protein_coding MGP_CBAJ_T0097600.1 MGP_CBAJ_G0035916.1 mouse_genomes_project X 175253758 175266519 - Tlr7 protein_coding processed_transcript MGP_CBAJ_T0096092.1 MGP_CBAJ_G0035489.1 mouse_genomes_project X 74312145 74314464 - MGP_CBAJ_P0096092 Lage3 protein_coding protein_coding MGP_CBAJ_T0096093.1 MGP_CBAJ_G0035489.1 mouse_genomes_project X 74313030 74314488 - MGP_CBAJ_P0096093 Lage3 protein_coding protein_coding MGP_CBAJ_T0096094.1 MGP_CBAJ_G0035489.1 mouse_genomes_project X 74313031 74314445 - MGP_CBAJ_P0096094 Lage3 protein_coding protein_coding MGP_CBAJ_T0010993.1 MGP_CBAJ_G0009131.1 mouse_genomes_project X 9165830 9165899 + Gm25246 miRNA miRNA MGP_CBAJ_T0011095.1 MGP_CBAJ_G0009233.1 mouse_genomes_project X 153482635 153482747 + Mir448 miRNA miRNA MGP_CBAJ_T0011630.1 MGP_CBAJ_G0009768.1 mouse_genomes_project X 65673109 65673374 + Gm23028 misc_RNA misc_RNA MGP_CBAJ_T0016313.1 MGP_CBAJ_G0014425.1 mouse_genomes_project X 100325511 100327396 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016248.1 MGP_CBAJ_G0014360.1 mouse_genomes_project X 89608296 89608638 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002443.1 MGP_CBAJ_G0002355.1 mouse_genomes_project X 132907926 132908991 + TEC TEC MGP_CBAJ_T0097541.1 MGP_CBAJ_G0035902.1 mouse_genomes_project X 172243918 172279965 + MGP_CBAJ_P0097541 Asb9 protein_coding protein_coding MGP_CBAJ_T0096820.1 MGP_CBAJ_G0035710.1 mouse_genomes_project X 138902365 138916968 + MGP_CBAJ_P0096820 Tnmd protein_coding protein_coding MGP_CBAJ_T0016414.1 MGP_CBAJ_G0014526.1 mouse_genomes_project X 116771589 116773354 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016022.1 MGP_CBAJ_G0014134.1 mouse_genomes_project X 19612869 19613319 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011021.1 MGP_CBAJ_G0009159.1 mouse_genomes_project X 50809619 50809718 - Mir351 miRNA miRNA MGP_CBAJ_T0015979.1 MGP_CBAJ_G0014091.1 mouse_genomes_project X 8377830 8379087 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096616.1 MGP_CBAJ_G0035640.1 mouse_genomes_project X 106810923 106837095 - MGP_CBAJ_P0096616 Rlim protein_coding protein_coding MGP_CBAJ_T0096617.1 MGP_CBAJ_G0035640.1 mouse_genomes_project X 106810923 106837095 - MGP_CBAJ_P0096617 Rlim protein_coding protein_coding MGP_CBAJ_T0096618.1 MGP_CBAJ_G0035640.1 mouse_genomes_project X 106833605 106837095 - Rlim protein_coding retained_intron MGP_CBAJ_T0011067.1 MGP_CBAJ_G0009205.1 mouse_genomes_project X 104938995 104939091 - Gm26318 miRNA miRNA MGP_CBAJ_T0016633.1 MGP_CBAJ_G0014745.1 mouse_genomes_project X 167542801 167543064 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096379.1 MGP_CBAJ_G0035577.1 mouse_genomes_project X 98458804 98493391 - MGP_CBAJ_P0096379 Vsig4 protein_coding protein_coding MGP_CBAJ_T0096380.1 MGP_CBAJ_G0035577.1 mouse_genomes_project X 98461551 98493365 - Vsig4 protein_coding processed_transcript MGP_CBAJ_T0018420.1 MGP_CBAJ_G0015533.1 mouse_genomes_project X 158953073 159040339 + processed_transcript processed_transcript MGP_CBAJ_T0018421.1 MGP_CBAJ_G0015533.1 mouse_genomes_project X 158953528 158993711 + processed_transcript processed_transcript MGP_CBAJ_T0018422.1 MGP_CBAJ_G0015533.1 mouse_genomes_project X 158953528 159040339 + processed_transcript processed_transcript MGP_CBAJ_T0018423.1 MGP_CBAJ_G0015533.1 mouse_genomes_project X 158954342 158972906 + processed_transcript processed_transcript MGP_CBAJ_T0018424.1 MGP_CBAJ_G0015533.1 mouse_genomes_project X 158993261 159040339 + processed_transcript processed_transcript MGP_CBAJ_T0095400.1 MGP_CBAJ_G0035308.1 mouse_genomes_project X 34649606 34660149 + MGP_CBAJ_P0095400 Rhox13 protein_coding protein_coding MGP_CBAJ_T0097449.1 MGP_CBAJ_G0035878.1 mouse_genomes_project X 168079244 168247023 - MGP_CBAJ_P0097449 Cdkl5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0097450.1 MGP_CBAJ_G0035878.1 mouse_genomes_project X 168079244 168246990 - MGP_CBAJ_P0097450 Cdkl5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0097451.1 MGP_CBAJ_G0035878.1 mouse_genomes_project X 168092742 168330325 - MGP_CBAJ_P0097451 Cdkl5 protein_coding protein_coding MGP_CBAJ_T0097453.1 MGP_CBAJ_G0035878.1 mouse_genomes_project X 168107575 168125607 - Cdkl5 protein_coding processed_transcript MGP_CBAJ_T0097454.1 MGP_CBAJ_G0035878.1 mouse_genomes_project X 168109816 168246990 - MGP_CBAJ_P0097454 Cdkl5 protein_coding protein_coding MGP_CBAJ_T0097455.1 MGP_CBAJ_G0035878.1 mouse_genomes_project X 168156217 168159773 - Cdkl5 protein_coding retained_intron MGP_CBAJ_T0016417.1 MGP_CBAJ_G0014529.1 mouse_genomes_project X 117670438 117691800 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016071.1 MGP_CBAJ_G0014183.1 mouse_genomes_project X 44731150 44732116 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097023.1 MGP_CBAJ_G0035777.1 mouse_genomes_project X 145275402 145392752 + MGP_CBAJ_P0097023 protein_coding unknown_likely_coding MGP_CBAJ_T0016602.1 MGP_CBAJ_G0014714.1 mouse_genomes_project X 161183856 161184503 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015951.1 MGP_CBAJ_G0014063.1 mouse_genomes_project X 2904955 2905384 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095816.1 MGP_CBAJ_G0035444.1 mouse_genomes_project X 72608269 72617236 - MGP_CBAJ_P0095816 Cetn2 protein_coding protein_coding MGP_CBAJ_T0095817.1 MGP_CBAJ_G0035444.1 mouse_genomes_project X 72612625 72615777 - MGP_CBAJ_P0095817 Cetn2 protein_coding protein_coding MGP_CBAJ_T0095818.1 MGP_CBAJ_G0035444.1 mouse_genomes_project X 72613829 72617204 - MGP_CBAJ_P0095818 Cetn2 protein_coding protein_coding MGP_CBAJ_T0096210.1 MGP_CBAJ_G0035520.1 mouse_genomes_project X 76748261 76757917 - MGP_CBAJ_P0096210 Cldn34d protein_coding protein_coding MGP_CBAJ_T0016283.1 MGP_CBAJ_G0014395.1 mouse_genomes_project X 95813844 95814346 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096423.1 MGP_CBAJ_G0035588.1 mouse_genomes_project X 101855727 101861326 - MGP_CBAJ_P0096423 Pja1 protein_coding protein_coding MGP_CBAJ_T0096424.1 MGP_CBAJ_G0035588.1 mouse_genomes_project X 101855731 101860772 - MGP_CBAJ_P0096424 Pja1 protein_coding protein_coding MGP_CBAJ_T0096425.1 MGP_CBAJ_G0035588.1 mouse_genomes_project X 101855761 101860820 - MGP_CBAJ_P0096425 Pja1 protein_coding protein_coding MGP_CBAJ_T0096426.1 MGP_CBAJ_G0035588.1 mouse_genomes_project X 101856108 101860777 - MGP_CBAJ_P0096426 Pja1 protein_coding protein_coding MGP_CBAJ_T0096427.1 MGP_CBAJ_G0035588.1 mouse_genomes_project X 101856140 101860757 - MGP_CBAJ_P0096427 Pja1 protein_coding protein_coding MGP_CBAJ_T0011078.1 MGP_CBAJ_G0009216.1 mouse_genomes_project X 135605616 135605726 - Gm26209 miRNA miRNA MGP_CBAJ_T0016035.1 MGP_CBAJ_G0014147.1 mouse_genomes_project X 35774978 35775925 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016032.1 MGP_CBAJ_G0014144.1 mouse_genomes_project X 34980030 34980421 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015988.1 MGP_CBAJ_G0014100.1 mouse_genomes_project X 10535155 10536032 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016534.1 MGP_CBAJ_G0014646.1 mouse_genomes_project X 147634243 147634543 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096218.1 MGP_CBAJ_G0035525.1 mouse_genomes_project X 78283734 78362148 + MGP_CBAJ_P0096218 Gm5938 protein_coding protein_coding MGP_CBAJ_T0016084.1 MGP_CBAJ_G0014196.1 mouse_genomes_project X 48824431 48827539 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016091.1 MGP_CBAJ_G0014203.1 mouse_genomes_project X 50605386 50606784 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016215.1 MGP_CBAJ_G0014327.1 mouse_genomes_project X 78936235 78937219 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098170.1 MGP_CBAJ_G0036443.1 mouse_genomes_project X 159494674 159494915 + Gm24687 ribozyme ribozyme MGP_CBAJ_T0011629.1 MGP_CBAJ_G0009767.1 mouse_genomes_project X 51085922 51086229 + Gm23718 misc_RNA misc_RNA MGP_CBAJ_T0096576.1 MGP_CBAJ_G0035624.1 mouse_genomes_project X 104927805 104932606 - MGP_CBAJ_P0096576 Cited1 protein_coding protein_coding MGP_CBAJ_T0096577.1 MGP_CBAJ_G0035624.1 mouse_genomes_project X 104927828 104932277 - MGP_CBAJ_P0096577 Cited1 protein_coding protein_coding MGP_CBAJ_T0096578.1 MGP_CBAJ_G0035624.1 mouse_genomes_project X 104928138 104931371 - MGP_CBAJ_P0096578 Cited1 protein_coding protein_coding MGP_CBAJ_T0096579.1 MGP_CBAJ_G0035624.1 mouse_genomes_project X 104928245 104931200 - MGP_CBAJ_P0096579 Cited1 protein_coding protein_coding MGP_CBAJ_T0096580.1 MGP_CBAJ_G0035624.1 mouse_genomes_project X 104928310 104932343 - MGP_CBAJ_P0096580 Cited1 protein_coding protein_coding MGP_CBAJ_T0096716.1 MGP_CBAJ_G0035669.1 mouse_genomes_project X 111056793 111141533 + MGP_CBAJ_P0096716 Fam46d protein_coding protein_coding MGP_CBAJ_T0096717.1 MGP_CBAJ_G0035669.1 mouse_genomes_project X 111081508 111139183 + MGP_CBAJ_P0096717 Fam46d protein_coding protein_coding MGP_CBAJ_T0096718.1 MGP_CBAJ_G0035669.1 mouse_genomes_project X 111081603 111141533 + MGP_CBAJ_P0096718 Fam46d protein_coding protein_coding MGP_CBAJ_T0096719.1 MGP_CBAJ_G0035669.1 mouse_genomes_project X 111081603 111139024 + MGP_CBAJ_P0096719 Fam46d protein_coding protein_coding MGP_CBAJ_T0011635.1 MGP_CBAJ_G0009773.1 mouse_genomes_project X 103225220 103225548 + Gm22160 misc_RNA misc_RNA MGP_CBAJ_T0100935.1 MGP_CBAJ_G0039190.1 mouse_genomes_project X 70246700 70246832 + Gm22785 snoRNA snoRNA MGP_CBAJ_T0011032.1 MGP_CBAJ_G0009170.1 mouse_genomes_project X 66008089 66008165 - Mir883a miRNA miRNA MGP_CBAJ_T0016273.1 MGP_CBAJ_G0014385.1 mouse_genomes_project X 93118190 93119337 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016031.1 MGP_CBAJ_G0014143.1 mouse_genomes_project X 33463985 33466188 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096150.1 MGP_CBAJ_G0035505.1 mouse_genomes_project X 75167860 75181726 + MGP_CBAJ_P0096150 Dkc1 protein_coding protein_coding MGP_CBAJ_T0096151.1 MGP_CBAJ_G0035505.1 mouse_genomes_project X 75168059 75174537 + MGP_CBAJ_P0096151 Dkc1 protein_coding protein_coding MGP_CBAJ_T0096152.1 MGP_CBAJ_G0035505.1 mouse_genomes_project X 75168092 75170894 + MGP_CBAJ_P0096152 Dkc1 protein_coding protein_coding MGP_CBAJ_T0096153.1 MGP_CBAJ_G0035505.1 mouse_genomes_project X 75168105 75170804 + Dkc1 protein_coding retained_intron MGP_CBAJ_T0096154.1 MGP_CBAJ_G0035505.1 mouse_genomes_project X 75168107 75170954 + Dkc1 protein_coding processed_transcript MGP_CBAJ_T0096155.1 MGP_CBAJ_G0035505.1 mouse_genomes_project X 75168121 75174459 + MGP_CBAJ_P0096155 Dkc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0096156.1 MGP_CBAJ_G0035505.1 mouse_genomes_project X 75168552 75170826 + Dkc1 protein_coding retained_intron MGP_CBAJ_T0096157.1 MGP_CBAJ_G0035505.1 mouse_genomes_project X 75171924 75179160 + Dkc1 protein_coding retained_intron MGP_CBAJ_T0096158.1 MGP_CBAJ_G0035505.1 mouse_genomes_project X 75172059 75180192 + MGP_CBAJ_P0096158 Dkc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0096159.1 MGP_CBAJ_G0035505.1 mouse_genomes_project X 75172265 75177667 + Dkc1 protein_coding processed_transcript MGP_CBAJ_T0096160.1 MGP_CBAJ_G0035505.1 mouse_genomes_project X 75172937 75177715 + Dkc1 protein_coding processed_transcript MGP_CBAJ_T0096161.1 MGP_CBAJ_G0035505.1 mouse_genomes_project X 75177897 75180225 + Dkc1 protein_coding retained_intron MGP_CBAJ_T0015995.1 MGP_CBAJ_G0014107.1 mouse_genomes_project X 12983439 12985772 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011076.1 MGP_CBAJ_G0009214.1 mouse_genomes_project X 116589928 116589998 - Mir361 miRNA miRNA MGP_CBAJ_T0096827.1 MGP_CBAJ_G0035713.1 mouse_genomes_project X 138984382 139008716 - MGP_CBAJ_P0096827 Sytl4 protein_coding protein_coding MGP_CBAJ_T0096828.1 MGP_CBAJ_G0035713.1 mouse_genomes_project X 138992919 139028310 - MGP_CBAJ_P0096828 Sytl4 protein_coding protein_coding MGP_CBAJ_T0096829.1 MGP_CBAJ_G0035713.1 mouse_genomes_project X 138996777 139007471 - Sytl4 protein_coding processed_transcript MGP_CBAJ_T0096830.1 MGP_CBAJ_G0035713.1 mouse_genomes_project X 138998819 139028307 - MGP_CBAJ_P0096830 Sytl4 protein_coding protein_coding MGP_CBAJ_T0016505.1 MGP_CBAJ_G0014617.1 mouse_genomes_project X 142493799 142494217 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096283.1 MGP_CBAJ_G0035547.1 mouse_genomes_project X 91062431 91065655 + MGP_CBAJ_P0096283 4932429P05Rik protein_coding protein_coding MGP_CBAJ_T0016513.1 MGP_CBAJ_G0014625.1 mouse_genomes_project X 142829018 142832675 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011066.1 MGP_CBAJ_G0009204.1 mouse_genomes_project X 104647956 104648060 - Gm27843 miRNA miRNA MGP_CBAJ_T0096145.1 MGP_CBAJ_G0035502.1 mouse_genomes_project X 74985257 74995071 + MGP_CBAJ_P0096145 protein_coding protein_coding MGP_CBAJ_T0096928.1 MGP_CBAJ_G0035742.1 mouse_genomes_project X 141092647 141097237 + MGP_CBAJ_P0096928 Armcx5 protein_coding protein_coding MGP_CBAJ_T0096933.1 MGP_CBAJ_G0035742.1 mouse_genomes_project X 141092649 141095321 + Armcx5 protein_coding retained_intron MGP_CBAJ_T0016545.1 MGP_CBAJ_G0014657.1 mouse_genomes_project X 148218540 148218798 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095260.1 MGP_CBAJ_G0035252.1 mouse_genomes_project X 16722107 16734034 + MGP_CBAJ_P0095260 Cdk16 protein_coding protein_coding MGP_CBAJ_T0095261.1 MGP_CBAJ_G0035252.1 mouse_genomes_project X 16722152 16728516 + Cdk16 protein_coding processed_transcript MGP_CBAJ_T0095262.1 MGP_CBAJ_G0035252.1 mouse_genomes_project X 16722571 16734034 + MGP_CBAJ_P0095262 Cdk16 protein_coding protein_coding MGP_CBAJ_T0095263.1 MGP_CBAJ_G0035252.1 mouse_genomes_project X 16728436 16730439 + Cdk16 protein_coding retained_intron MGP_CBAJ_T0095264.1 MGP_CBAJ_G0035252.1 mouse_genomes_project X 16730014 16730639 + Cdk16 protein_coding retained_intron MGP_CBAJ_T0095265.1 MGP_CBAJ_G0035252.1 mouse_genomes_project X 16730171 16731362 + Cdk16 protein_coding retained_intron MGP_CBAJ_T0095266.1 MGP_CBAJ_G0035252.1 mouse_genomes_project X 16730558 16731321 + Cdk16 protein_coding retained_intron MGP_CBAJ_T0095267.1 MGP_CBAJ_G0035252.1 mouse_genomes_project X 16730598 16733953 + Cdk16 protein_coding processed_transcript MGP_CBAJ_T0016380.1 MGP_CBAJ_G0014492.1 mouse_genomes_project X 109784988 109785495 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011632.1 MGP_CBAJ_G0009770.1 mouse_genomes_project X 68038530 68038658 + Gm27838 misc_RNA misc_RNA MGP_CBAJ_T0016493.1 MGP_CBAJ_G0014605.1 mouse_genomes_project X 140095802 140096435 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100934.1 MGP_CBAJ_G0039189.1 mouse_genomes_project X 68044215 68044343 - Gm22435 snoRNA snoRNA MGP_CBAJ_T0016020.1 MGP_CBAJ_G0014132.1 mouse_genomes_project X 18639123 18639666 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011042.1 MGP_CBAJ_G0009180.1 mouse_genomes_project X 66055585 66055643 - Mir465d miRNA miRNA MGP_CBAJ_T0018364.1 MGP_CBAJ_G0015517.1 mouse_genomes_project X 50811410 50813555 - C430049B03Rik processed_transcript processed_transcript MGP_CBAJ_T0018365.1 MGP_CBAJ_G0015517.1 mouse_genomes_project X 50811571 50813525 - C430049B03Rik processed_transcript processed_transcript MGP_CBAJ_T0018366.1 MGP_CBAJ_G0015517.1 mouse_genomes_project X 50812134 50813553 - C430049B03Rik processed_transcript processed_transcript MGP_CBAJ_T0018367.1 MGP_CBAJ_G0015517.1 mouse_genomes_project X 50812557 50813555 - C430049B03Rik processed_transcript processed_transcript MGP_CBAJ_T0096678.1 MGP_CBAJ_G0035657.1 mouse_genomes_project X 109383653 109553602 - protein_coding retained_intron MGP_CBAJ_T0096679.1 MGP_CBAJ_G0035657.1 mouse_genomes_project X 109383660 109566111 - protein_coding processed_transcript MGP_CBAJ_T0096681.1 MGP_CBAJ_G0035657.1 mouse_genomes_project X 109538078 109625455 - MGP_CBAJ_P0096681 protein_coding protein_coding MGP_CBAJ_T0096682.1 MGP_CBAJ_G0035657.1 mouse_genomes_project X 109563787 109567440 - protein_coding retained_intron MGP_CBAJ_T0096683.1 MGP_CBAJ_G0035657.1 mouse_genomes_project X 109579817 109625203 - MGP_CBAJ_P0096683 protein_coding protein_coding MGP_CBAJ_T0096684.1 MGP_CBAJ_G0035657.1 mouse_genomes_project X 109612838 109625078 - MGP_CBAJ_P0096684 protein_coding protein_coding MGP_CBAJ_T0096685.1 MGP_CBAJ_G0035657.1 mouse_genomes_project X 109612850 109625582 - MGP_CBAJ_P0096685 protein_coding protein_coding MGP_CBAJ_T0097009.1 MGP_CBAJ_G0035772.1 mouse_genomes_project X 144856328 144862287 - MGP_CBAJ_P0097009 Serpina7 protein_coding protein_coding MGP_CBAJ_T0097010.1 MGP_CBAJ_G0035772.1 mouse_genomes_project X 144856328 144862289 - MGP_CBAJ_P0097010 Serpina7 protein_coding protein_coding MGP_CBAJ_T0097011.1 MGP_CBAJ_G0035772.1 mouse_genomes_project X 144860557 144862308 - MGP_CBAJ_P0097011 Serpina7 protein_coding protein_coding MGP_CBAJ_T0096664.1 MGP_CBAJ_G0035652.1 mouse_genomes_project X 109052718 109061253 + MGP_CBAJ_P0096664 Cox7b protein_coding protein_coding MGP_CBAJ_T0096665.1 MGP_CBAJ_G0035652.1 mouse_genomes_project X 109052734 109053148 + Cox7b protein_coding processed_transcript MGP_CBAJ_T0096666.1 MGP_CBAJ_G0035652.1 mouse_genomes_project X 109058193 109060761 + Cox7b protein_coding retained_intron MGP_CBAJ_T0016592.1 MGP_CBAJ_G0014704.1 mouse_genomes_project X 158318880 158319267 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096370.1 MGP_CBAJ_G0035575.1 mouse_genomes_project X 98057642 98085493 - MGP_CBAJ_P0096370 Las1l protein_coding protein_coding MGP_CBAJ_T0096371.1 MGP_CBAJ_G0035575.1 mouse_genomes_project X 98057642 98085493 - MGP_CBAJ_P0096371 Las1l protein_coding protein_coding MGP_CBAJ_T0096372.1 MGP_CBAJ_G0035575.1 mouse_genomes_project X 98063549 98085466 - Las1l protein_coding retained_intron MGP_CBAJ_T0096373.1 MGP_CBAJ_G0035575.1 mouse_genomes_project X 98071853 98073589 - Las1l protein_coding processed_transcript MGP_CBAJ_T0096374.1 MGP_CBAJ_G0035575.1 mouse_genomes_project X 98072322 98076444 - Las1l protein_coding processed_transcript MGP_CBAJ_T0096375.1 MGP_CBAJ_G0035575.1 mouse_genomes_project X 98074820 98085542 - Las1l protein_coding retained_intron MGP_CBAJ_T0016547.1 MGP_CBAJ_G0014659.1 mouse_genomes_project X 148430780 148430993 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096784.1 MGP_CBAJ_G0035693.1 mouse_genomes_project X 118557040 118557969 + MGP_CBAJ_P0096784 Ube2dnl2 protein_coding protein_coding MGP_CBAJ_T0094965.1 MGP_CBAJ_G0035170.1 mouse_genomes_project X 2487258 2495330 - Magix protein_coding processed_transcript MGP_CBAJ_T0094966.1 MGP_CBAJ_G0035170.1 mouse_genomes_project X 2488720 2495168 - MGP_CBAJ_P0094966 Magix protein_coding protein_coding MGP_CBAJ_T0016433.1 MGP_CBAJ_G0014545.1 mouse_genomes_project X 121199031 121199304 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016181.1 MGP_CBAJ_G0014293.1 mouse_genomes_project X 73936893 73937694 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0102274.1 MGP_CBAJ_G0040303.1 mouse_genomes_project X 141949816 141951731 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0094934.1 MGP_CBAJ_G0035164.1 mouse_genomes_project X 2380526 2398632 + MGP_CBAJ_P0094934 Foxp3 protein_coding protein_coding MGP_CBAJ_T0094935.1 MGP_CBAJ_G0035164.1 mouse_genomes_project X 2380543 2398623 + MGP_CBAJ_P0094935 Foxp3 protein_coding protein_coding MGP_CBAJ_T0094936.1 MGP_CBAJ_G0035164.1 mouse_genomes_project X 2381333 2398623 + MGP_CBAJ_P0094936 Foxp3 protein_coding protein_coding MGP_CBAJ_T0094937.1 MGP_CBAJ_G0035164.1 mouse_genomes_project X 2387009 2398632 + MGP_CBAJ_P0094937 Foxp3 protein_coding protein_coding MGP_CBAJ_T0102271.1 MGP_CBAJ_G0040300.1 mouse_genomes_project X 109439005 109466131 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0098132.1 MGP_CBAJ_G0036405.1 mouse_genomes_project X 17875516 17875595 + Gm25553 rRNA rRNA MGP_CBAJ_T0016203.1 MGP_CBAJ_G0014315.1 mouse_genomes_project X 77448953 77449939 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016599.1 MGP_CBAJ_G0014711.1 mouse_genomes_project X 160374531 160375297 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015963.1 MGP_CBAJ_G0014075.1 mouse_genomes_project X 4496325 4496631 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095376.1 MGP_CBAJ_G0035289.1 mouse_genomes_project X 33574734 33605584 + MGP_CBAJ_P0095376 Nkap protein_coding protein_coding MGP_CBAJ_T0095377.1 MGP_CBAJ_G0035289.1 mouse_genomes_project X 33586607 33594459 + Nkap protein_coding retained_intron MGP_CBAJ_T0016208.1 MGP_CBAJ_G0014320.1 mouse_genomes_project X 78244411 78244657 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016572.1 MGP_CBAJ_G0014684.1 mouse_genomes_project X 152264350 152265434 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016009.1 MGP_CBAJ_G0014121.1 mouse_genomes_project X 16392284 16393077 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016238.1 MGP_CBAJ_G0014350.1 mouse_genomes_project X 86678032 86678469 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005524.1 MGP_CBAJ_G0004650.1 mouse_genomes_project X 157795806 157854192 - A230072E10Rik antisense antisense MGP_CBAJ_T0005525.1 MGP_CBAJ_G0004650.1 mouse_genomes_project X 157797056 157816159 - A230072E10Rik antisense antisense MGP_CBAJ_T0005526.1 MGP_CBAJ_G0004650.1 mouse_genomes_project X 157797056 157803118 - A230072E10Rik antisense antisense MGP_CBAJ_T0005527.1 MGP_CBAJ_G0004650.1 mouse_genomes_project X 157818085 157851225 - A230072E10Rik antisense antisense MGP_CBAJ_T0016207.1 MGP_CBAJ_G0014319.1 mouse_genomes_project X 77938556 77939325 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095617.1 MGP_CBAJ_G0035373.1 mouse_genomes_project X 51465498 51466542 - MGP_CBAJ_P0095617 Cxx1b protein_coding protein_coding MGP_CBAJ_T0095363.1 MGP_CBAJ_G0035284.1 mouse_genomes_project X 33307876 33323235 - MGP_CBAJ_P0095363 Nkrf protein_coding protein_coding MGP_CBAJ_T0016495.1 MGP_CBAJ_G0014607.1 mouse_genomes_project X 140950778 140951521 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096543.1 MGP_CBAJ_G0035614.1 mouse_genomes_project X 103995058 103999512 + MGP_CBAJ_P0096543 Itgb1bp2 protein_coding protein_coding MGP_CBAJ_T0096544.1 MGP_CBAJ_G0035614.1 mouse_genomes_project X 103998081 103999115 + Itgb1bp2 protein_coding retained_intron MGP_CBAJ_T0096735.1 MGP_CBAJ_G0035677.1 mouse_genomes_project X 114308287 114311214 + MGP_CBAJ_P0096735 Pou3f4 protein_coding protein_coding MGP_CBAJ_T0102256.1 MGP_CBAJ_G0040285.1 mouse_genomes_project X 87289413 87290446 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016377.1 MGP_CBAJ_G0014489.1 mouse_genomes_project X 109355064 109358249 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097324.1 MGP_CBAJ_G0035845.1 mouse_genomes_project X 159798418 159838138 + MGP_CBAJ_P0097324 Rragb protein_coding protein_coding MGP_CBAJ_T0097325.1 MGP_CBAJ_G0035845.1 mouse_genomes_project X 159798424 159811649 + MGP_CBAJ_P0097325 Rragb protein_coding protein_coding MGP_CBAJ_T0098134.1 MGP_CBAJ_G0036407.1 mouse_genomes_project X 68334715 68334836 - n-R5s7 rRNA rRNA MGP_CBAJ_T0097629.1 MGP_CBAJ_G0035924.1 mouse_genomes_project X 177985062 178099070 + MGP_CBAJ_P0097629 Mid1 protein_coding protein_coding MGP_CBAJ_T0097630.1 MGP_CBAJ_G0035924.1 mouse_genomes_project X 178036209 178088425 + Mid1 protein_coding processed_transcript MGP_CBAJ_T0097631.1 MGP_CBAJ_G0035924.1 mouse_genomes_project X 178086050 178097126 + Mid1 protein_coding processed_transcript MGP_CBAJ_T0097632.1 MGP_CBAJ_G0035924.1 mouse_genomes_project X 178086050 178097126 + Mid1 protein_coding processed_transcript MGP_CBAJ_T0097633.1 MGP_CBAJ_G0035924.1 mouse_genomes_project X 178088424 178097126 + Mid1 protein_coding processed_transcript MGP_CBAJ_T0097634.1 MGP_CBAJ_G0035924.1 mouse_genomes_project X 178088424 178097127 + Mid1 protein_coding processed_transcript MGP_CBAJ_T0097635.1 MGP_CBAJ_G0035924.1 mouse_genomes_project X 178088424 178097126 + Mid1 protein_coding processed_transcript MGP_CBAJ_T0097636.1 MGP_CBAJ_G0035924.1 mouse_genomes_project X 178088424 178097126 + Mid1 protein_coding processed_transcript MGP_CBAJ_T0016263.1 MGP_CBAJ_G0014375.1 mouse_genomes_project X 91227701 91227951 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015983.1 MGP_CBAJ_G0014095.1 mouse_genomes_project X 8793452 8795589 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016324.1 MGP_CBAJ_G0014436.1 mouse_genomes_project X 103754801 103755070 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095226.1 MGP_CBAJ_G0035242.1 mouse_genomes_project X 14263003 14312211 - 4930578C19Rik protein_coding processed_transcript MGP_CBAJ_T0095227.1 MGP_CBAJ_G0035242.1 mouse_genomes_project X 14266549 14312185 - MGP_CBAJ_P0095227 4930578C19Rik protein_coding protein_coding MGP_CBAJ_T0016584.1 MGP_CBAJ_G0014696.1 mouse_genomes_project X 157387897 157389437 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0102272.1 MGP_CBAJ_G0040301.1 mouse_genomes_project X 140550303 140553665 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0097063.1 MGP_CBAJ_G0035789.1 mouse_genomes_project X 146510034 146513175 - Tsc22d3 protein_coding processed_transcript MGP_CBAJ_T0097064.1 MGP_CBAJ_G0035789.1 mouse_genomes_project X 146510034 146513694 - MGP_CBAJ_P0097064 Tsc22d3 protein_coding protein_coding MGP_CBAJ_T0097065.1 MGP_CBAJ_G0035789.1 mouse_genomes_project X 146510043 146513608 - Tsc22d3 protein_coding retained_intron MGP_CBAJ_T0097066.1 MGP_CBAJ_G0035789.1 mouse_genomes_project X 146510768 146574799 - MGP_CBAJ_P0097066 Tsc22d3 protein_coding protein_coding MGP_CBAJ_T0097067.1 MGP_CBAJ_G0035789.1 mouse_genomes_project X 146510857 146520606 - MGP_CBAJ_P0097067 Tsc22d3 protein_coding protein_coding MGP_CBAJ_T0097068.1 MGP_CBAJ_G0035789.1 mouse_genomes_project X 146513609 146520797 - Tsc22d3 protein_coding processed_transcript MGP_CBAJ_T0011018.1 MGP_CBAJ_G0009156.1 mouse_genomes_project X 50804525 50804616 - Mir450-1 miRNA miRNA MGP_CBAJ_T0095268.1 MGP_CBAJ_G0035253.1 mouse_genomes_project X 16740394 16764048 + MGP_CBAJ_P0095268 Usp11 protein_coding protein_coding MGP_CBAJ_T0095269.1 MGP_CBAJ_G0035253.1 mouse_genomes_project X 16740422 16749642 + Usp11 protein_coding processed_transcript MGP_CBAJ_T0095270.1 MGP_CBAJ_G0035253.1 mouse_genomes_project X 16740448 16761194 + Usp11 protein_coding retained_intron MGP_CBAJ_T0095271.1 MGP_CBAJ_G0035253.1 mouse_genomes_project X 16748313 16764046 + Usp11 protein_coding retained_intron MGP_CBAJ_T0016494.1 MGP_CBAJ_G0014606.1 mouse_genomes_project X 140518107 140518853 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0102277.1 MGP_CBAJ_G0040306.1 mouse_genomes_project X 159770638 159771285 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0097357.1 MGP_CBAJ_G0035858.1 mouse_genomes_project X 162443486 162496377 - MGP_CBAJ_P0097357 Ptchd1 protein_coding protein_coding MGP_CBAJ_T0097358.1 MGP_CBAJ_G0035858.1 mouse_genomes_project X 162443572 162496170 - MGP_CBAJ_P0097358 Ptchd1 protein_coding protein_coding MGP_CBAJ_T0097359.1 MGP_CBAJ_G0035858.1 mouse_genomes_project X 162459866 162496866 - Ptchd1 protein_coding processed_transcript MGP_CBAJ_T0016666.1 MGP_CBAJ_G0014778.1 mouse_genomes_project X 175387677 175388220 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096139.1 MGP_CBAJ_G0035497.1 mouse_genomes_project X 74634126 74651964 - MGP_CBAJ_P0096139 protein_coding protein_coding MGP_CBAJ_T0095602.1 MGP_CBAJ_G0035366.1 mouse_genomes_project X 50740438 50777507 + MGP_CBAJ_P0095602 Hprt protein_coding protein_coding MGP_CBAJ_T0009338.1 MGP_CBAJ_G0007478.1 mouse_genomes_project X 174767853 174774634 - Gm15230 lincRNA lincRNA MGP_CBAJ_T0016439.1 MGP_CBAJ_G0014551.1 mouse_genomes_project X 121848899 121852996 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096278.1 MGP_CBAJ_G0035545.1 mouse_genomes_project X 87742380 89295592 - MGP_CBAJ_P0096278 Il1rapl1 protein_coding protein_coding MGP_CBAJ_T0096279.1 MGP_CBAJ_G0035545.1 mouse_genomes_project X 87749786 89053634 - MGP_CBAJ_P0096279 Il1rapl1 protein_coding protein_coding MGP_CBAJ_T0096280.1 MGP_CBAJ_G0035545.1 mouse_genomes_project X 87776028 89295592 - MGP_CBAJ_P0096280 Il1rapl1 protein_coding protein_coding MGP_CBAJ_T0016537.1 MGP_CBAJ_G0014649.1 mouse_genomes_project X 147843043 147843316 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016564.1 MGP_CBAJ_G0014676.1 mouse_genomes_project X 151363134 151363830 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016334.1 MGP_CBAJ_G0014446.1 mouse_genomes_project X 105370237 105371642 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016463.1 MGP_CBAJ_G0014575.1 mouse_genomes_project X 131354913 131356950 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095136.1 MGP_CBAJ_G0035216.1 mouse_genomes_project X 5077579 5191735 + MGP_CBAJ_P0095136 Sytl5 protein_coding protein_coding MGP_CBAJ_T0095137.1 MGP_CBAJ_G0035216.1 mouse_genomes_project X 5077579 5191735 + MGP_CBAJ_P0095137 Sytl5 protein_coding protein_coding MGP_CBAJ_T0102282.1 MGP_CBAJ_G0040311.1 mouse_genomes_project X 167572097 167572390 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0096317.1 MGP_CBAJ_G0035561.1 mouse_genomes_project X 96040695 96067778 - MGP_CBAJ_P0096317 Eif2s3x protein_coding protein_coding MGP_CBAJ_T0096318.1 MGP_CBAJ_G0035561.1 mouse_genomes_project X 96044909 96066818 - MGP_CBAJ_P0096318 Eif2s3x protein_coding unknown_likely_coding MGP_CBAJ_T0096319.1 MGP_CBAJ_G0035561.1 mouse_genomes_project X 96053675 96067720 - MGP_CBAJ_P0096319 Eif2s3x protein_coding protein_coding MGP_CBAJ_T0096320.1 MGP_CBAJ_G0035561.1 mouse_genomes_project X 96056918 96067931 - Eif2s3x protein_coding processed_transcript MGP_CBAJ_T0011048.1 MGP_CBAJ_G0009186.1 mouse_genomes_project X 67366612 67366687 - Mir509 miRNA miRNA MGP_CBAJ_T0101207.1 MGP_CBAJ_G0039363.1 mouse_genomes_project X 17482178 17490236 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101208.1 MGP_CBAJ_G0039363.1 mouse_genomes_project X 17482253 17484336 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0096469.1 MGP_CBAJ_G0035601.1 mouse_genomes_project X 103240214 103297547 + MGP_CBAJ_P0096469 Dlg3 protein_coding protein_coding MGP_CBAJ_T0096470.1 MGP_CBAJ_G0035601.1 mouse_genomes_project X 103240215 103297549 + MGP_CBAJ_P0096470 Dlg3 protein_coding protein_coding MGP_CBAJ_T0096471.1 MGP_CBAJ_G0035601.1 mouse_genomes_project X 103240241 103297549 + MGP_CBAJ_P0096471 Dlg3 protein_coding protein_coding MGP_CBAJ_T0096472.1 MGP_CBAJ_G0035601.1 mouse_genomes_project X 103240487 103297551 + Dlg3 protein_coding retained_intron MGP_CBAJ_T0096473.1 MGP_CBAJ_G0035601.1 mouse_genomes_project X 103248766 103297549 + MGP_CBAJ_P0096473 Dlg3 protein_coding protein_coding MGP_CBAJ_T0096474.1 MGP_CBAJ_G0035601.1 mouse_genomes_project X 103254476 103297549 + Dlg3 protein_coding processed_transcript MGP_CBAJ_T0096475.1 MGP_CBAJ_G0035601.1 mouse_genomes_project X 103273730 103285791 + Dlg3 protein_coding processed_transcript MGP_CBAJ_T0096476.1 MGP_CBAJ_G0035601.1 mouse_genomes_project X 103287177 103293971 + Dlg3 protein_coding processed_transcript MGP_CBAJ_T0095592.1 MGP_CBAJ_G0035360.1 mouse_genomes_project X 49401387 49443340 - MGP_CBAJ_P0095592 Usp26 protein_coding protein_coding MGP_CBAJ_T0095593.1 MGP_CBAJ_G0035360.1 mouse_genomes_project X 49401387 49443251 - MGP_CBAJ_P0095593 Usp26 protein_coding protein_coding MGP_CBAJ_T0099673.1 MGP_CBAJ_G0037928.1 mouse_genomes_project X 56349513 56349620 + Gm25023 snRNA snRNA MGP_CBAJ_T0016113.1 MGP_CBAJ_G0014225.1 mouse_genomes_project X 57098856 57099318 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016558.1 MGP_CBAJ_G0014670.1 mouse_genomes_project X 150384260 150384590 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096195.1 MGP_CBAJ_G0035513.1 mouse_genomes_project X 75622572 75632321 + MGP_CBAJ_P0096195 Vbp1 protein_coding protein_coding MGP_CBAJ_T0096196.1 MGP_CBAJ_G0035513.1 mouse_genomes_project X 75622572 75643188 + MGP_CBAJ_P0096196 Vbp1 protein_coding protein_coding MGP_CBAJ_T0096197.1 MGP_CBAJ_G0035513.1 mouse_genomes_project X 75622590 75630029 + Vbp1 protein_coding retained_intron MGP_CBAJ_T0015982.1 MGP_CBAJ_G0014094.1 mouse_genomes_project X 8782361 8782542 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096321.1 MGP_CBAJ_G0035562.1 mouse_genomes_project X 96099289 96102850 + Klhl15 protein_coding processed_transcript MGP_CBAJ_T0096322.1 MGP_CBAJ_G0035562.1 mouse_genomes_project X 96099294 96117114 + MGP_CBAJ_P0096322 Klhl15 protein_coding protein_coding MGP_CBAJ_T0096323.1 MGP_CBAJ_G0035562.1 mouse_genomes_project X 96099617 96118437 + MGP_CBAJ_P0096323 Klhl15 protein_coding protein_coding MGP_CBAJ_T0096324.1 MGP_CBAJ_G0035562.1 mouse_genomes_project X 96099620 96140128 + MGP_CBAJ_P0096324 Klhl15 protein_coding protein_coding MGP_CBAJ_T0096325.1 MGP_CBAJ_G0035562.1 mouse_genomes_project X 96099677 96120342 + MGP_CBAJ_P0096325 Klhl15 protein_coding protein_coding MGP_CBAJ_T0096326.1 MGP_CBAJ_G0035562.1 mouse_genomes_project X 96099680 96139357 + Klhl15 protein_coding retained_intron MGP_CBAJ_T0096327.1 MGP_CBAJ_G0035562.1 mouse_genomes_project X 96099680 96118441 + MGP_CBAJ_P0096327 Klhl15 protein_coding protein_coding MGP_CBAJ_T0096328.1 MGP_CBAJ_G0035562.1 mouse_genomes_project X 96100001 96140122 + MGP_CBAJ_P0096328 Klhl15 protein_coding protein_coding MGP_CBAJ_T0096329.1 MGP_CBAJ_G0035562.1 mouse_genomes_project X 96100503 96144361 + MGP_CBAJ_P0096329 Klhl15 protein_coding protein_coding MGP_CBAJ_T0011011.1 MGP_CBAJ_G0009149.1 mouse_genomes_project X 50451554 50451629 - Mir363 miRNA miRNA MGP_CBAJ_T0096299.1 MGP_CBAJ_G0035557.1 mouse_genomes_project X 95467003 95561352 + MGP_CBAJ_P0096299 Pcyt1b protein_coding protein_coding MGP_CBAJ_T0096300.1 MGP_CBAJ_G0035557.1 mouse_genomes_project X 95488774 95561352 + MGP_CBAJ_P0096300 Pcyt1b protein_coding protein_coding MGP_CBAJ_T0096301.1 MGP_CBAJ_G0035557.1 mouse_genomes_project X 95542956 95546250 + Pcyt1b protein_coding processed_transcript MGP_CBAJ_T0099721.1 MGP_CBAJ_G0037976.1 mouse_genomes_project X 170365034 170365141 - Gm23901 snRNA snRNA MGP_CBAJ_T0096708.1 MGP_CBAJ_G0035666.1 mouse_genomes_project X 110616822 110622766 - MGP_CBAJ_P0096708 Itm2a protein_coding protein_coding MGP_CBAJ_T0097601.1 MGP_CBAJ_G0035917.1 mouse_genomes_project X 175283223 175323072 - MGP_CBAJ_P0097601 Prps2 protein_coding protein_coding MGP_CBAJ_T0097602.1 MGP_CBAJ_G0035917.1 mouse_genomes_project X 175311531 175323033 - Prps2 protein_coding processed_transcript MGP_CBAJ_T0016594.1 MGP_CBAJ_G0014706.1 mouse_genomes_project X 159534093 159540357 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096017.1 MGP_CBAJ_G0035481.1 mouse_genomes_project X 74203751 74206950 + MGP_CBAJ_P0096017 Emd protein_coding protein_coding MGP_CBAJ_T0096018.1 MGP_CBAJ_G0035481.1 mouse_genomes_project X 74203816 74206424 + MGP_CBAJ_P0096018 Emd protein_coding protein_coding MGP_CBAJ_T0096019.1 MGP_CBAJ_G0035481.1 mouse_genomes_project X 74203825 74204750 + Emd protein_coding processed_transcript MGP_CBAJ_T0096020.1 MGP_CBAJ_G0035481.1 mouse_genomes_project X 74203874 74210061 + MGP_CBAJ_P0096020 Emd protein_coding protein_coding MGP_CBAJ_T0096021.1 MGP_CBAJ_G0035481.1 mouse_genomes_project X 74203880 74206386 + MGP_CBAJ_P0096021 Emd protein_coding nonsense_mediated_decay MGP_CBAJ_T0096244.1 MGP_CBAJ_G0035536.1 mouse_genomes_project X 83487452 84114510 + protein_coding retained_intron MGP_CBAJ_T0096245.1 MGP_CBAJ_G0035536.1 mouse_genomes_project X 83487485 86043932 + MGP_CBAJ_P0096245 protein_coding protein_coding MGP_CBAJ_T0096246.1 MGP_CBAJ_G0035536.1 mouse_genomes_project X 83584873 84396889 + protein_coding retained_intron MGP_CBAJ_T0096248.1 MGP_CBAJ_G0035536.1 mouse_genomes_project X 84272199 84788646 + MGP_CBAJ_P0096248 protein_coding unknown_likely_coding MGP_CBAJ_T0096249.1 MGP_CBAJ_G0035536.1 mouse_genomes_project X 84546875 84587684 + protein_coding processed_transcript MGP_CBAJ_T0096250.1 MGP_CBAJ_G0035536.1 mouse_genomes_project X 84629848 84630850 + protein_coding processed_transcript MGP_CBAJ_T0096251.1 MGP_CBAJ_G0035536.1 mouse_genomes_project X 84800654 85048510 + protein_coding processed_transcript MGP_CBAJ_T0096252.1 MGP_CBAJ_G0035536.1 mouse_genomes_project X 85378011 85976290 + protein_coding retained_intron MGP_CBAJ_T0096253.1 MGP_CBAJ_G0035536.1 mouse_genomes_project X 85566021 85793124 + protein_coding retained_intron MGP_CBAJ_T0096254.1 MGP_CBAJ_G0035536.1 mouse_genomes_project X 85879174 85886440 + protein_coding retained_intron MGP_CBAJ_T0096255.1 MGP_CBAJ_G0035536.1 mouse_genomes_project X 85879198 85971012 + protein_coding retained_intron MGP_CBAJ_T0096256.1 MGP_CBAJ_G0035536.1 mouse_genomes_project X 85879201 85976288 + protein_coding retained_intron MGP_CBAJ_T0096257.1 MGP_CBAJ_G0035536.1 mouse_genomes_project X 85879247 86042837 + MGP_CBAJ_P0096257 protein_coding unknown_likely_coding MGP_CBAJ_T0096258.1 MGP_CBAJ_G0035536.1 mouse_genomes_project X 85879292 86042830 + MGP_CBAJ_P0096258 protein_coding protein_coding MGP_CBAJ_T0096259.1 MGP_CBAJ_G0035536.1 mouse_genomes_project X 85879292 86040295 + MGP_CBAJ_P0096259 protein_coding protein_coding MGP_CBAJ_T0096260.1 MGP_CBAJ_G0035536.1 mouse_genomes_project X 86010397 86040634 + protein_coding processed_transcript MGP_CBAJ_T0095138.1 MGP_CBAJ_G0035217.1 mouse_genomes_project X 5237061 5325680 - MGP_CBAJ_P0095138 Srpx protein_coding protein_coding MGP_CBAJ_T0095139.1 MGP_CBAJ_G0035217.1 mouse_genomes_project X 5237639 5325707 - MGP_CBAJ_P0095139 Srpx protein_coding protein_coding MGP_CBAJ_T0095140.1 MGP_CBAJ_G0035217.1 mouse_genomes_project X 5237990 5325603 - MGP_CBAJ_P0095140 Srpx protein_coding protein_coding MGP_CBAJ_T0095141.1 MGP_CBAJ_G0035217.1 mouse_genomes_project X 5274591 5325674 - Srpx protein_coding processed_transcript MGP_CBAJ_T0009322.1 MGP_CBAJ_G0007469.1 mouse_genomes_project X 156746028 156775135 - Gm15104 lincRNA lincRNA MGP_CBAJ_T0009323.1 MGP_CBAJ_G0007469.1 mouse_genomes_project X 156746378 156746792 - Gm15104 lincRNA lincRNA MGP_CBAJ_T0011096.1 MGP_CBAJ_G0009234.1 mouse_genomes_project X 157006067 157006128 - Mir3620 miRNA miRNA MGP_CBAJ_T0095683.1 MGP_CBAJ_G0035398.1 mouse_genomes_project X 56402711 56411468 + MGP_CBAJ_P0095683 Zic3 protein_coding protein_coding MGP_CBAJ_T0095684.1 MGP_CBAJ_G0035398.1 mouse_genomes_project X 56410665 56416582 + MGP_CBAJ_P0095684 Zic3 protein_coding protein_coding MGP_CBAJ_T0095685.1 MGP_CBAJ_G0035398.1 mouse_genomes_project X 56411018 56416582 + MGP_CBAJ_P0095685 Zic3 protein_coding protein_coding MGP_CBAJ_T0095686.1 MGP_CBAJ_G0035398.1 mouse_genomes_project X 56411029 56421746 + MGP_CBAJ_P0095686 Zic3 protein_coding protein_coding MGP_CBAJ_T0016650.1 MGP_CBAJ_G0014762.1 mouse_genomes_project X 170912532 170913002 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0094985.1 MGP_CBAJ_G0035173.1 mouse_genomes_project X 2550251 2553365 + MGP_CBAJ_P0094985 Praf2 protein_coding protein_coding MGP_CBAJ_T0016140.1 MGP_CBAJ_G0014252.1 mouse_genomes_project X 61945901 61946814 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009344.1 MGP_CBAJ_G0007482.1 mouse_genomes_project X 177520843 177551200 + Gm15245 lincRNA lincRNA MGP_CBAJ_T0011073.1 MGP_CBAJ_G0009211.1 mouse_genomes_project X 108350428 108350516 - Mir384 miRNA miRNA MGP_CBAJ_T0016421.1 MGP_CBAJ_G0014533.1 mouse_genomes_project X 118506256 118506463 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097100.1 MGP_CBAJ_G0035804.1 mouse_genomes_project X 148739182 148899840 + MGP_CBAJ_P0097100 Tmem164 protein_coding protein_coding MGP_CBAJ_T0097101.1 MGP_CBAJ_G0035804.1 mouse_genomes_project X 148740570 148826497 + Tmem164 protein_coding retained_intron MGP_CBAJ_T0097102.1 MGP_CBAJ_G0035804.1 mouse_genomes_project X 148826199 148904954 + MGP_CBAJ_P0097102 Tmem164 protein_coding protein_coding MGP_CBAJ_T0095913.1 MGP_CBAJ_G0035471.1 mouse_genomes_project X 73810998 73813325 + MGP_CBAJ_P0095913 Avpr2 protein_coding protein_coding MGP_CBAJ_T0095914.1 MGP_CBAJ_G0035471.1 mouse_genomes_project X 73810999 73812318 + Avpr2 protein_coding processed_transcript MGP_CBAJ_T0095915.1 MGP_CBAJ_G0035471.1 mouse_genomes_project X 73811006 73814399 + MGP_CBAJ_P0095915 Avpr2 protein_coding protein_coding MGP_CBAJ_T0095916.1 MGP_CBAJ_G0035471.1 mouse_genomes_project X 73811010 73813094 + MGP_CBAJ_P0095916 Avpr2 protein_coding protein_coding MGP_CBAJ_T0099712.1 MGP_CBAJ_G0037967.1 mouse_genomes_project X 152487026 152487086 - Gm26151 snRNA snRNA MGP_CBAJ_T0018351.1 MGP_CBAJ_G0015515.1 mouse_genomes_project X 48097712 48108047 - processed_transcript processed_transcript MGP_CBAJ_T0018352.1 MGP_CBAJ_G0015515.1 mouse_genomes_project X 48097712 48181016 - processed_transcript processed_transcript MGP_CBAJ_T0018353.1 MGP_CBAJ_G0015515.1 mouse_genomes_project X 48097719 48106035 - processed_transcript processed_transcript MGP_CBAJ_T0018354.1 MGP_CBAJ_G0015515.1 mouse_genomes_project X 48101305 48113074 - processed_transcript processed_transcript MGP_CBAJ_T0018355.1 MGP_CBAJ_G0015515.1 mouse_genomes_project X 48101514 48104192 - processed_transcript processed_transcript MGP_CBAJ_T0018356.1 MGP_CBAJ_G0015515.1 mouse_genomes_project X 48102823 48136883 - processed_transcript processed_transcript MGP_CBAJ_T0018357.1 MGP_CBAJ_G0015515.1 mouse_genomes_project X 48162480 48181058 - processed_transcript processed_transcript MGP_CBAJ_T0018358.1 MGP_CBAJ_G0015515.1 mouse_genomes_project X 48172205 48181066 - processed_transcript processed_transcript MGP_CBAJ_T0018359.1 MGP_CBAJ_G0015515.1 mouse_genomes_project X 48172205 48181076 - processed_transcript processed_transcript MGP_CBAJ_T0016582.1 MGP_CBAJ_G0014694.1 mouse_genomes_project X 157142642 157143290 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100954.1 MGP_CBAJ_G0039209.1 mouse_genomes_project X 123604126 123604242 - Gm26182 snoRNA snoRNA MGP_CBAJ_T0016630.1 MGP_CBAJ_G0014742.1 mouse_genomes_project X 166814775 166815338 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015985.1 MGP_CBAJ_G0014097.1 mouse_genomes_project X 8997926 8998462 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015953.1 MGP_CBAJ_G0014065.1 mouse_genomes_project X 3579702 3580062 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016173.1 MGP_CBAJ_G0014285.1 mouse_genomes_project X 70178949 70179325 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016373.1 MGP_CBAJ_G0014485.1 mouse_genomes_project X 108710263 108710455 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096769.1 MGP_CBAJ_G0035689.1 mouse_genomes_project X 116553066 116726245 - MGP_CBAJ_P0096769 Chm protein_coding protein_coding MGP_CBAJ_T0096770.1 MGP_CBAJ_G0035689.1 mouse_genomes_project X 116555647 116560043 - Chm protein_coding processed_transcript MGP_CBAJ_T0096771.1 MGP_CBAJ_G0035689.1 mouse_genomes_project X 116574978 116720160 - Chm protein_coding processed_transcript MGP_CBAJ_T0096772.1 MGP_CBAJ_G0035689.1 mouse_genomes_project X 116646188 116720160 - Chm protein_coding processed_transcript MGP_CBAJ_T0016498.1 MGP_CBAJ_G0014610.1 mouse_genomes_project X 142009629 142011117 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011627.1 MGP_CBAJ_G0009765.1 mouse_genomes_project X 33507219 33507490 - Gm24809 misc_RNA misc_RNA MGP_CBAJ_T0009343.1 MGP_CBAJ_G0007481.1 mouse_genomes_project X 175098908 175107716 + Gm15228 lincRNA lincRNA MGP_CBAJ_T0016119.1 MGP_CBAJ_G0014231.1 mouse_genomes_project X 59161398 59163330 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100936.1 MGP_CBAJ_G0039191.1 mouse_genomes_project X 73637456 73637579 + Gm25226 snoRNA snoRNA MGP_CBAJ_T0096944.1 MGP_CBAJ_G0035747.1 mouse_genomes_project X 141476417 141481687 - MGP_CBAJ_P0096944 Bex2 protein_coding protein_coding MGP_CBAJ_T0015968.1 MGP_CBAJ_G0014080.1 mouse_genomes_project X 6488783 6489412 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100972.1 MGP_CBAJ_G0039227.1 mouse_genomes_project X 161971569 161971701 + Gm25429 snoRNA snoRNA MGP_CBAJ_T0016466.1 MGP_CBAJ_G0014578.1 mouse_genomes_project X 132552687 132555472 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099676.1 MGP_CBAJ_G0037931.1 mouse_genomes_project X 58806723 58806830 + Gm22287 snRNA snRNA MGP_CBAJ_T0011063.1 MGP_CBAJ_G0009201.1 mouse_genomes_project X 98454282 98454392 + Mir223 miRNA miRNA MGP_CBAJ_T0010998.1 MGP_CBAJ_G0009136.1 mouse_genomes_project X 16917763 16917820 - Mir5617 miRNA miRNA MGP_CBAJ_T0011645.1 MGP_CBAJ_G0009783.1 mouse_genomes_project X 131821612 131821887 + Gm22636 misc_RNA misc_RNA MGP_CBAJ_T0096768.1 MGP_CBAJ_G0035688.1 mouse_genomes_project X 116139755 116204096 - MGP_CBAJ_P0096768 Pof1b protein_coding protein_coding MGP_CBAJ_T0016521.1 MGP_CBAJ_G0014633.1 mouse_genomes_project X 145534277 145538798 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016095.1 MGP_CBAJ_G0014207.1 mouse_genomes_project X 51611937 51612138 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011016.1 MGP_CBAJ_G0009154.1 mouse_genomes_project X 50452364 50452429 - Mir106a miRNA miRNA MGP_CBAJ_T0095986.1 MGP_CBAJ_G0035476.1 mouse_genomes_project X 73957847 74020635 - MGP_CBAJ_P0095986 Mecp2 protein_coding protein_coding MGP_CBAJ_T0095987.1 MGP_CBAJ_G0035476.1 mouse_genomes_project X 73958083 74014999 - MGP_CBAJ_P0095987 Mecp2 protein_coding protein_coding MGP_CBAJ_T0095988.1 MGP_CBAJ_G0035476.1 mouse_genomes_project X 73966441 74020656 - MGP_CBAJ_P0095988 Mecp2 protein_coding protein_coding MGP_CBAJ_T0095989.1 MGP_CBAJ_G0035476.1 mouse_genomes_project X 73966442 74020578 - MGP_CBAJ_P0095989 Mecp2 protein_coding protein_coding MGP_CBAJ_T0095990.1 MGP_CBAJ_G0035476.1 mouse_genomes_project X 73966823 74020576 - MGP_CBAJ_P0095990 Mecp2 protein_coding protein_coding MGP_CBAJ_T0095991.1 MGP_CBAJ_G0035476.1 mouse_genomes_project X 74015998 74020563 - Mecp2 protein_coding retained_intron MGP_CBAJ_T0097512.1 MGP_CBAJ_G0035893.1 mouse_genomes_project X 171623181 171685473 - MGP_CBAJ_P0097512 Car5b protein_coding protein_coding MGP_CBAJ_T0097513.1 MGP_CBAJ_G0035893.1 mouse_genomes_project X 171666053 171685457 - Car5b protein_coding retained_intron MGP_CBAJ_T0096945.1 MGP_CBAJ_G0035748.1 mouse_genomes_project X 141485479 141502029 - MGP_CBAJ_P0096945 Nxf3 protein_coding protein_coding MGP_CBAJ_T0096946.1 MGP_CBAJ_G0035748.1 mouse_genomes_project X 141492991 141502016 - MGP_CBAJ_P0096946 Nxf3 protein_coding protein_coding MGP_CBAJ_T0016223.1 MGP_CBAJ_G0014335.1 mouse_genomes_project X 80912964 80917068 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011001.1 MGP_CBAJ_G0009139.1 mouse_genomes_project X 34760521 34760601 + Mir3110 miRNA miRNA MGP_CBAJ_T0095020.1 MGP_CBAJ_G0035178.1 mouse_genomes_project X 2668426 2669071 + Otud5 protein_coding processed_transcript MGP_CBAJ_T0095021.1 MGP_CBAJ_G0035178.1 mouse_genomes_project X 2668893 2705772 + MGP_CBAJ_P0095021 Otud5 protein_coding protein_coding MGP_CBAJ_T0095022.1 MGP_CBAJ_G0035178.1 mouse_genomes_project X 2668918 2704006 + MGP_CBAJ_P0095022 Otud5 protein_coding protein_coding MGP_CBAJ_T0095023.1 MGP_CBAJ_G0035178.1 mouse_genomes_project X 2669118 2704431 + MGP_CBAJ_P0095023 Otud5 protein_coding protein_coding MGP_CBAJ_T0095024.1 MGP_CBAJ_G0035178.1 mouse_genomes_project X 2669144 2704436 + MGP_CBAJ_P0095024 Otud5 protein_coding protein_coding MGP_CBAJ_T0095025.1 MGP_CBAJ_G0035178.1 mouse_genomes_project X 2669178 2705766 + MGP_CBAJ_P0095025 Otud5 protein_coding protein_coding MGP_CBAJ_T0095026.1 MGP_CBAJ_G0035178.1 mouse_genomes_project X 2669667 2704430 + Otud5 protein_coding retained_intron MGP_CBAJ_T0095027.1 MGP_CBAJ_G0035178.1 mouse_genomes_project X 2669668 2697111 + Otud5 protein_coding retained_intron MGP_CBAJ_T0098128.1 MGP_CBAJ_G0036401.1 mouse_genomes_project X 821175 821294 + n-R5s2 rRNA rRNA MGP_CBAJ_T0016514.1 MGP_CBAJ_G0014626.1 mouse_genomes_project X 143281834 143285269 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018342.1 MGP_CBAJ_G0015510.1 mouse_genomes_project X 8175198 8241716 + Gm14634 processed_transcript processed_transcript MGP_CBAJ_T0018343.1 MGP_CBAJ_G0015510.1 mouse_genomes_project X 8175464 8238443 + Gm14634 processed_transcript processed_transcript MGP_CBAJ_T0016280.1 MGP_CBAJ_G0014392.1 mouse_genomes_project X 95450670 95450941 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016383.1 MGP_CBAJ_G0014495.1 mouse_genomes_project X 109902434 109902840 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095230.1 MGP_CBAJ_G0035245.1 mouse_genomes_project X 16072293 16281591 - MGP_CBAJ_P0095230 Slc9a7 protein_coding protein_coding MGP_CBAJ_T0095231.1 MGP_CBAJ_G0035245.1 mouse_genomes_project X 16072501 16281468 - MGP_CBAJ_P0095231 Slc9a7 protein_coding unknown_likely_coding MGP_CBAJ_T0095232.1 MGP_CBAJ_G0035245.1 mouse_genomes_project X 16072501 16281309 - MGP_CBAJ_P0095232 Slc9a7 protein_coding unknown_likely_coding MGP_CBAJ_T0095233.1 MGP_CBAJ_G0035245.1 mouse_genomes_project X 16099676 16281570 - Slc9a7 protein_coding retained_intron MGP_CBAJ_T0095234.1 MGP_CBAJ_G0035245.1 mouse_genomes_project X 16132785 16281554 - MGP_CBAJ_P0095234 Slc9a7 protein_coding protein_coding MGP_CBAJ_T0095235.1 MGP_CBAJ_G0035245.1 mouse_genomes_project X 16143333 16281591 - Slc9a7 protein_coding retained_intron MGP_CBAJ_T0101203.1 MGP_CBAJ_G0039361.1 mouse_genomes_project X 5647348 5649287 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101204.1 MGP_CBAJ_G0039361.1 mouse_genomes_project X 5648691 5649182 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0095118.1 MGP_CBAJ_G0035205.1 mouse_genomes_project X 3924746 3927329 + MGP_CBAJ_P0095118 B630019K06Rik protein_coding protein_coding MGP_CBAJ_T0016384.1 MGP_CBAJ_G0014496.1 mouse_genomes_project X 109971347 109971639 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002438.1 MGP_CBAJ_G0002350.1 mouse_genomes_project X 39035259 39039380 - TEC TEC MGP_CBAJ_T0015978.1 MGP_CBAJ_G0014090.1 mouse_genomes_project X 8349826 8350509 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0094940.1 MGP_CBAJ_G0035166.1 mouse_genomes_project X 2410467 2438429 + MGP_CBAJ_P0094940 Cacna1f protein_coding nonsense_mediated_decay MGP_CBAJ_T0094941.1 MGP_CBAJ_G0035166.1 mouse_genomes_project X 2410482 2421341 + Cacna1f protein_coding retained_intron MGP_CBAJ_T0094942.1 MGP_CBAJ_G0035166.1 mouse_genomes_project X 2410483 2438432 + MGP_CBAJ_P0094942 Cacna1f protein_coding protein_coding MGP_CBAJ_T0094943.1 MGP_CBAJ_G0035166.1 mouse_genomes_project X 2410504 2422365 + MGP_CBAJ_P0094943 Cacna1f protein_coding protein_coding MGP_CBAJ_T0094944.1 MGP_CBAJ_G0035166.1 mouse_genomes_project X 2410513 2438432 + MGP_CBAJ_P0094944 Cacna1f protein_coding protein_coding MGP_CBAJ_T0094945.1 MGP_CBAJ_G0035166.1 mouse_genomes_project X 2410528 2438430 + Cacna1f protein_coding retained_intron MGP_CBAJ_T0094946.1 MGP_CBAJ_G0035166.1 mouse_genomes_project X 2429465 2431177 + Cacna1f protein_coding retained_intron MGP_CBAJ_T0094947.1 MGP_CBAJ_G0035166.1 mouse_genomes_project X 2430429 2433482 + MGP_CBAJ_P0094947 Cacna1f protein_coding protein_coding MGP_CBAJ_T0094948.1 MGP_CBAJ_G0035166.1 mouse_genomes_project X 2430429 2433735 + MGP_CBAJ_P0094948 Cacna1f protein_coding protein_coding MGP_CBAJ_T0094949.1 MGP_CBAJ_G0035166.1 mouse_genomes_project X 2431424 2432998 + Cacna1f protein_coding retained_intron MGP_CBAJ_T0094950.1 MGP_CBAJ_G0035166.1 mouse_genomes_project X 2434511 2436225 + Cacna1f protein_coding retained_intron MGP_CBAJ_T0005519.1 MGP_CBAJ_G0004646.1 mouse_genomes_project X 106163644 106164857 - Gm26952 antisense antisense MGP_CBAJ_T0096997.1 MGP_CBAJ_G0035768.1 mouse_genomes_project X 142720735 142726420 - MGP_CBAJ_P0096997 Esx1 protein_coding protein_coding MGP_CBAJ_T0096998.1 MGP_CBAJ_G0035768.1 mouse_genomes_project X 142720735 142726265 - MGP_CBAJ_P0096998 Esx1 protein_coding protein_coding MGP_CBAJ_T0096999.1 MGP_CBAJ_G0035768.1 mouse_genomes_project X 142723482 142730907 - MGP_CBAJ_P0096999 Esx1 protein_coding protein_coding MGP_CBAJ_T0102233.1 MGP_CBAJ_G0040262.1 mouse_genomes_project X 4229395 4229908 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016290.1 MGP_CBAJ_G0014402.1 mouse_genomes_project X 96438885 96439492 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097052.1 MGP_CBAJ_G0035785.1 mouse_genomes_project X 145904679 145960217 - MGP_CBAJ_P0097052 Nup62cl protein_coding protein_coding MGP_CBAJ_T0097053.1 MGP_CBAJ_G0035785.1 mouse_genomes_project X 145919920 145959942 - MGP_CBAJ_P0097053 Nup62cl protein_coding protein_coding MGP_CBAJ_T0097054.1 MGP_CBAJ_G0035785.1 mouse_genomes_project X 145925467 145960361 - MGP_CBAJ_P0097054 Nup62cl protein_coding protein_coding MGP_CBAJ_T0097055.1 MGP_CBAJ_G0035785.1 mouse_genomes_project X 145926067 145960229 - MGP_CBAJ_P0097055 Nup62cl protein_coding protein_coding MGP_CBAJ_T0097056.1 MGP_CBAJ_G0035785.1 mouse_genomes_project X 145932647 145960200 - MGP_CBAJ_P0097056 Nup62cl protein_coding protein_coding MGP_CBAJ_T0097321.1 MGP_CBAJ_G0035843.1 mouse_genomes_project X 159670434 159671844 - MGP_CBAJ_P0097321 Mageh1 protein_coding protein_coding MGP_CBAJ_T0096922.1 MGP_CBAJ_G0035738.1 mouse_genomes_project X 140947786 140962841 - MGP_CBAJ_P0096922 Prame protein_coding protein_coding MGP_CBAJ_T0096923.1 MGP_CBAJ_G0035738.1 mouse_genomes_project X 140947928 140950590 - MGP_CBAJ_P0096923 Prame protein_coding protein_coding MGP_CBAJ_T0099667.1 MGP_CBAJ_G0037922.1 mouse_genomes_project X 43032245 43032352 - Gm25078 snRNA snRNA MGP_CBAJ_T0016213.1 MGP_CBAJ_G0014325.1 mouse_genomes_project X 78890833 78891205 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096284.1 MGP_CBAJ_G0035548.1 mouse_genomes_project X 91300639 91303394 - MGP_CBAJ_P0096284 4930415L06Rik protein_coding protein_coding MGP_CBAJ_T0095349.1 MGP_CBAJ_G0035281.1 mouse_genomes_project X 33205071 33207137 + MGP_CBAJ_P0095349 protein_coding protein_coding MGP_CBAJ_T0095350.1 MGP_CBAJ_G0035281.1 mouse_genomes_project X 33205353 33206891 + protein_coding retained_intron MGP_CBAJ_T0096714.1 MGP_CBAJ_G0035668.1 mouse_genomes_project X 111045254 111081366 - MGP_CBAJ_P0096714 2610002M06Rik protein_coding protein_coding MGP_CBAJ_T0096715.1 MGP_CBAJ_G0035668.1 mouse_genomes_project X 111050340 111058353 - 2610002M06Rik protein_coding retained_intron MGP_CBAJ_T0016154.1 MGP_CBAJ_G0014266.1 mouse_genomes_project X 66446972 66447590 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100950.1 MGP_CBAJ_G0039205.1 mouse_genomes_project X 106931795 106931933 - Gm22266 snoRNA snoRNA MGP_CBAJ_T0016212.1 MGP_CBAJ_G0014324.1 mouse_genomes_project X 78635196 78636262 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098147.1 MGP_CBAJ_G0036420.1 mouse_genomes_project X 166654340 166654449 + Gm23806 rRNA rRNA MGP_CBAJ_T0016378.1 MGP_CBAJ_G0014490.1 mouse_genomes_project X 109763368 109764241 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0018411.1 MGP_CBAJ_G0015531.1 mouse_genomes_project X 142301209 142317426 + BC065397 processed_transcript processed_transcript MGP_CBAJ_T0018412.1 MGP_CBAJ_G0015531.1 mouse_genomes_project X 142301231 142319125 + BC065397 processed_transcript processed_transcript MGP_CBAJ_T0018413.1 MGP_CBAJ_G0015531.1 mouse_genomes_project X 142301243 142304013 + BC065397 processed_transcript processed_transcript MGP_CBAJ_T0018414.1 MGP_CBAJ_G0015531.1 mouse_genomes_project X 142301273 142317404 + BC065397 processed_transcript processed_transcript MGP_CBAJ_T0018415.1 MGP_CBAJ_G0015531.1 mouse_genomes_project X 142302375 142368132 + BC065397 processed_transcript processed_transcript MGP_CBAJ_T0018416.1 MGP_CBAJ_G0015531.1 mouse_genomes_project X 142302838 142317441 + BC065397 processed_transcript processed_transcript MGP_CBAJ_T0018417.1 MGP_CBAJ_G0015531.1 mouse_genomes_project X 142324856 142368141 + BC065397 processed_transcript processed_transcript MGP_CBAJ_T0015944.1 MGP_CBAJ_G0014056.1 mouse_genomes_project X 2330854 2331417 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009294.1 MGP_CBAJ_G0007454.1 mouse_genomes_project X 103214523 103225221 + Gm14902 lincRNA lincRNA MGP_CBAJ_T0095718.1 MGP_CBAJ_G0035412.1 mouse_genomes_project X 63283645 63296180 - MGP_CBAJ_P0095718 Slitrk4 protein_coding protein_coding MGP_CBAJ_T0095719.1 MGP_CBAJ_G0035412.1 mouse_genomes_project X 63288970 63296163 - MGP_CBAJ_P0095719 Slitrk4 protein_coding protein_coding MGP_CBAJ_T0095720.1 MGP_CBAJ_G0035412.1 mouse_genomes_project X 63291921 63295006 - MGP_CBAJ_P0095720 Slitrk4 protein_coding protein_coding MGP_CBAJ_T0016025.1 MGP_CBAJ_G0014137.1 mouse_genomes_project X 32585647 32586022 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0094938.1 MGP_CBAJ_G0035165.1 mouse_genomes_project X 2397197 2408904 - MGP_CBAJ_P0094938 Ccdc22 protein_coding protein_coding MGP_CBAJ_T0094939.1 MGP_CBAJ_G0035165.1 mouse_genomes_project X 2397198 2400668 - Ccdc22 protein_coding retained_intron MGP_CBAJ_T0015937.1 MGP_CBAJ_G0014049.1 mouse_genomes_project X 531724 533548 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016356.1 MGP_CBAJ_G0014468.1 mouse_genomes_project X 106517941 106518659 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095344.1 MGP_CBAJ_G0035278.1 mouse_genomes_project X 33010258 33018938 + MGP_CBAJ_P0095344 Pgrmc1 protein_coding protein_coding MGP_CBAJ_T0096461.1 MGP_CBAJ_G0035599.1 mouse_genomes_project X 103092131 103200985 + MGP_CBAJ_P0096461 Kif4 protein_coding protein_coding MGP_CBAJ_T0096462.1 MGP_CBAJ_G0035599.1 mouse_genomes_project X 103100290 103102640 + Kif4 protein_coding retained_intron MGP_CBAJ_T0096463.1 MGP_CBAJ_G0035599.1 mouse_genomes_project X 103180781 103198421 + Kif4 protein_coding processed_transcript MGP_CBAJ_T0096137.1 MGP_CBAJ_G0035495.1 mouse_genomes_project X 74557657 74558593 - MGP_CBAJ_P0096137 Olfr1326-ps1 protein_coding protein_coding MGP_CBAJ_T0016110.1 MGP_CBAJ_G0014222.1 mouse_genomes_project X 56803187 56803604 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096441.1 MGP_CBAJ_G0035591.1 mouse_genomes_project X 102846164 102859460 - MGP_CBAJ_P0096441 Awat2 protein_coding protein_coding MGP_CBAJ_T0011641.1 MGP_CBAJ_G0009779.1 mouse_genomes_project X 106416792 106416885 + Gm27987 misc_RNA misc_RNA MGP_CBAJ_T0097362.1 MGP_CBAJ_G0035860.1 mouse_genomes_project X 164170666 164451406 - MGP_CBAJ_P0097362 Phex protein_coding protein_coding MGP_CBAJ_T0097363.1 MGP_CBAJ_G0035860.1 mouse_genomes_project X 164174151 164437732 - MGP_CBAJ_P0097363 Phex protein_coding protein_coding MGP_CBAJ_T0097364.1 MGP_CBAJ_G0035860.1 mouse_genomes_project X 164233603 164451432 - MGP_CBAJ_P0097364 Phex protein_coding protein_coding MGP_CBAJ_T0096934.1 MGP_CBAJ_G0035743.1 mouse_genomes_project X 141213473 141223484 + MGP_CBAJ_P0096934 Gprasp2 protein_coding protein_coding MGP_CBAJ_T0096935.1 MGP_CBAJ_G0035743.1 mouse_genomes_project X 141213495 141223480 + MGP_CBAJ_P0096935 Gprasp2 protein_coding protein_coding MGP_CBAJ_T0096936.1 MGP_CBAJ_G0035743.1 mouse_genomes_project X 141213530 141215555 + Gprasp2 protein_coding processed_transcript MGP_CBAJ_T0096937.1 MGP_CBAJ_G0035743.1 mouse_genomes_project X 141213543 141215430 + Gprasp2 protein_coding processed_transcript MGP_CBAJ_T0095511.1 MGP_CBAJ_G0035335.1 mouse_genomes_project X 45548002 45563159 + MGP_CBAJ_P0095511 Sash3 protein_coding protein_coding MGP_CBAJ_T0016325.1 MGP_CBAJ_G0014437.1 mouse_genomes_project X 104028653 104028865 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016269.1 MGP_CBAJ_G0014381.1 mouse_genomes_project X 92787366 92787741 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097143.1 MGP_CBAJ_G0035812.1 mouse_genomes_project X 150447297 150779625 - MGP_CBAJ_P0097143 Trpc5 protein_coding protein_coding MGP_CBAJ_T0097144.1 MGP_CBAJ_G0035812.1 mouse_genomes_project X 150487620 150779448 - Trpc5 protein_coding retained_intron MGP_CBAJ_T0016360.1 MGP_CBAJ_G0014472.1 mouse_genomes_project X 106775597 106777046 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016281.1 MGP_CBAJ_G0014393.1 mouse_genomes_project X 95745003 95746641 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016476.1 MGP_CBAJ_G0014588.1 mouse_genomes_project X 135905685 135906995 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097514.1 MGP_CBAJ_G0035894.1 mouse_genomes_project X 171725872 171731280 - MGP_CBAJ_P0097514 Siah1b protein_coding protein_coding MGP_CBAJ_T0097515.1 MGP_CBAJ_G0035894.1 mouse_genomes_project X 171725872 171731309 - MGP_CBAJ_P0097515 Siah1b protein_coding protein_coding MGP_CBAJ_T0097516.1 MGP_CBAJ_G0035894.1 mouse_genomes_project X 171727045 171731652 - MGP_CBAJ_P0097516 Siah1b protein_coding protein_coding MGP_CBAJ_T0095063.1 MGP_CBAJ_G0035189.1 mouse_genomes_project X 2850811 2871756 - MGP_CBAJ_P0095063 Glod5 protein_coding protein_coding MGP_CBAJ_T0095681.1 MGP_CBAJ_G0035396.1 mouse_genomes_project X 55717915 55811458 + MGP_CBAJ_P0095681 Gm364 protein_coding protein_coding MGP_CBAJ_T0011027.1 MGP_CBAJ_G0009165.1 mouse_genomes_project X 58951702 58951792 - Mir505 miRNA miRNA MGP_CBAJ_T0094916.1 MGP_CBAJ_G0035158.1 mouse_genomes_project X 1560486 1689260 + MGP_CBAJ_P0094916 Dgkk protein_coding protein_coding MGP_CBAJ_T0095834.1 MGP_CBAJ_G0035454.1 mouse_genomes_project X 73236251 73252050 + MGP_CBAJ_P0095834 Zfp92 protein_coding protein_coding MGP_CBAJ_T0095835.1 MGP_CBAJ_G0035454.1 mouse_genomes_project X 73236715 73253437 + MGP_CBAJ_P0095835 Zfp92 protein_coding protein_coding MGP_CBAJ_T0016448.1 MGP_CBAJ_G0014560.1 mouse_genomes_project X 124337759 124338214 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0018350.1 MGP_CBAJ_G0015514.1 mouse_genomes_project X 36792513 37250441 + processed_transcript processed_transcript MGP_CBAJ_T0016206.1 MGP_CBAJ_G0014318.1 mouse_genomes_project X 77893791 77897023 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097310.1 MGP_CBAJ_G0035839.1 mouse_genomes_project X 159190837 159191473 + MGP_CBAJ_P0097310 Cldn34a protein_coding protein_coding MGP_CBAJ_T0016264.1 MGP_CBAJ_G0014376.1 mouse_genomes_project X 91466291 91467047 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016202.1 MGP_CBAJ_G0014314.1 mouse_genomes_project X 77171465 77171904 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011033.1 MGP_CBAJ_G0009171.1 mouse_genomes_project X 66017446 66017524 - Mir883b miRNA miRNA MGP_CBAJ_T0096964.1 MGP_CBAJ_G0035757.1 mouse_genomes_project X 142260642 142264139 + MGP_CBAJ_P0096964 Tceal1 protein_coding protein_coding MGP_CBAJ_T0005491.1 MGP_CBAJ_G0004622.1 mouse_genomes_project X 3038960 3041504 + Rbm3os antisense antisense MGP_CBAJ_T0005492.1 MGP_CBAJ_G0004622.1 mouse_genomes_project X 3039456 3041216 + Rbm3os antisense antisense MGP_CBAJ_T0005508.1 MGP_CBAJ_G0004636.1 mouse_genomes_project X 71057633 71088032 + Gm16189 antisense antisense MGP_CBAJ_T0096286.1 MGP_CBAJ_G0035550.1 mouse_genomes_project X 93034877 93035912 + MGP_CBAJ_P0096286 protein_coding protein_coding MGP_CBAJ_T0016575.1 MGP_CBAJ_G0014687.1 mouse_genomes_project X 152830845 152832053 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095948.1 MGP_CBAJ_G0035473.1 mouse_genomes_project X 73843473 73854304 - MGP_CBAJ_P0095948 Renbp protein_coding protein_coding MGP_CBAJ_T0095949.1 MGP_CBAJ_G0035473.1 mouse_genomes_project X 73843473 73854246 - MGP_CBAJ_P0095949 Renbp protein_coding protein_coding MGP_CBAJ_T0095950.1 MGP_CBAJ_G0035473.1 mouse_genomes_project X 73843474 73847740 - Renbp protein_coding retained_intron MGP_CBAJ_T0095951.1 MGP_CBAJ_G0035473.1 mouse_genomes_project X 73843475 73854271 - Renbp protein_coding retained_intron MGP_CBAJ_T0095952.1 MGP_CBAJ_G0035473.1 mouse_genomes_project X 73843491 73854210 - MGP_CBAJ_P0095952 Renbp protein_coding protein_coding MGP_CBAJ_T0095953.1 MGP_CBAJ_G0035473.1 mouse_genomes_project X 73846601 73852583 - Renbp protein_coding processed_transcript MGP_CBAJ_T0095954.1 MGP_CBAJ_G0035473.1 mouse_genomes_project X 73847605 73849390 - Renbp protein_coding retained_intron MGP_CBAJ_T0095955.1 MGP_CBAJ_G0035473.1 mouse_genomes_project X 73849548 73854195 - Renbp protein_coding retained_intron MGP_CBAJ_T0095956.1 MGP_CBAJ_G0035473.1 mouse_genomes_project X 73852595 73854199 - MGP_CBAJ_P0095956 Renbp protein_coding nonsense_mediated_decay MGP_CBAJ_T0095957.1 MGP_CBAJ_G0035473.1 mouse_genomes_project X 73853042 73854206 - Renbp protein_coding retained_intron MGP_CBAJ_T0098218.1 MGP_CBAJ_G0036491.1 mouse_genomes_project X 32173988 32174263 + Gm25624 scaRNA scaRNA MGP_CBAJ_T0095080.1 MGP_CBAJ_G0035193.1 mouse_genomes_project X 3032791 3035025 - Rbm3 protein_coding processed_transcript MGP_CBAJ_T0095081.1 MGP_CBAJ_G0035193.1 mouse_genomes_project X 3032794 3039229 - MGP_CBAJ_P0095081 Rbm3 protein_coding protein_coding MGP_CBAJ_T0095082.1 MGP_CBAJ_G0035193.1 mouse_genomes_project X 3034600 3039211 - MGP_CBAJ_P0095082 Rbm3 protein_coding protein_coding MGP_CBAJ_T0095083.1 MGP_CBAJ_G0035193.1 mouse_genomes_project X 3036655 3039229 - MGP_CBAJ_P0095083 Rbm3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0095084.1 MGP_CBAJ_G0035193.1 mouse_genomes_project X 3036878 3039254 - Rbm3 protein_coding retained_intron MGP_CBAJ_T0095085.1 MGP_CBAJ_G0035193.1 mouse_genomes_project X 3038005 3039291 - Rbm3 protein_coding retained_intron MGP_CBAJ_T0016200.1 MGP_CBAJ_G0014312.1 mouse_genomes_project X 76922247 76925202 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097093.1 MGP_CBAJ_G0035801.1 mouse_genomes_project X 148233279 148246755 + MGP_CBAJ_P0097093 Nxt2 protein_coding protein_coding MGP_CBAJ_T0097094.1 MGP_CBAJ_G0035801.1 mouse_genomes_project X 148234735 148238632 + Nxt2 protein_coding retained_intron MGP_CBAJ_T0097095.1 MGP_CBAJ_G0035801.1 mouse_genomes_project X 148234875 148246761 + MGP_CBAJ_P0097095 Nxt2 protein_coding protein_coding MGP_CBAJ_T0102234.1 MGP_CBAJ_G0040263.1 mouse_genomes_project X 4750987 4751241 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099715.1 MGP_CBAJ_G0037970.1 mouse_genomes_project X 160289967 160290074 - Gm25793 snRNA snRNA MGP_CBAJ_T0016159.1 MGP_CBAJ_G0014271.1 mouse_genomes_project X 67679163 67679776 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100942.1 MGP_CBAJ_G0039197.1 mouse_genomes_project X 77017573 77017712 + Gm23280 snoRNA snoRNA MGP_CBAJ_T0016359.1 MGP_CBAJ_G0014471.1 mouse_genomes_project X 106739088 106740102 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016112.1 MGP_CBAJ_G0014224.1 mouse_genomes_project X 57020666 57021555 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095745.1 MGP_CBAJ_G0035422.1 mouse_genomes_project X 68767455 69319484 + MGP_CBAJ_P0095745 Aff2 protein_coding protein_coding MGP_CBAJ_T0095746.1 MGP_CBAJ_G0035422.1 mouse_genomes_project X 68767666 68966478 + Aff2 protein_coding processed_transcript MGP_CBAJ_T0095747.1 MGP_CBAJ_G0035422.1 mouse_genomes_project X 68767861 69232199 + Aff2 protein_coding processed_transcript MGP_CBAJ_T0095748.1 MGP_CBAJ_G0035422.1 mouse_genomes_project X 69308089 69318223 + Aff2 protein_coding retained_intron MGP_CBAJ_T0095599.1 MGP_CBAJ_G0035364.1 mouse_genomes_project X 50508743 50517015 + MGP_CBAJ_P0095599 Ccdc160 protein_coding protein_coding MGP_CBAJ_T0097328.1 MGP_CBAJ_G0035847.1 mouse_genomes_project X 160198557 160201882 + MGP_CBAJ_P0097328 Ubqln2 protein_coding protein_coding MGP_CBAJ_T0011642.1 MGP_CBAJ_G0009780.1 mouse_genomes_project X 106417890 106418017 + Gm27285 misc_RNA misc_RNA MGP_CBAJ_T0096477.1 MGP_CBAJ_G0035602.1 mouse_genomes_project X 103322977 103564092 - MGP_CBAJ_P0096477 Tex11 protein_coding protein_coding MGP_CBAJ_T0096478.1 MGP_CBAJ_G0035602.1 mouse_genomes_project X 103322977 103564120 - MGP_CBAJ_P0096478 Tex11 protein_coding protein_coding MGP_CBAJ_T0096479.1 MGP_CBAJ_G0035602.1 mouse_genomes_project X 103357449 103564120 - MGP_CBAJ_P0096479 Tex11 protein_coding protein_coding MGP_CBAJ_T0011101.1 MGP_CBAJ_G0009239.1 mouse_genomes_project X 170396256 170396431 - miRNA miRNA MGP_CBAJ_T0016147.1 MGP_CBAJ_G0014259.1 mouse_genomes_project X 64194035 64194285 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098220.1 MGP_CBAJ_G0036493.1 mouse_genomes_project X 98343884 98344020 - Gm24718 scaRNA scaRNA MGP_CBAJ_T0096791.1 MGP_CBAJ_G0035699.1 mouse_genomes_project X 124449420 125155003 + MGP_CBAJ_P0096791 Pcdh11x protein_coding protein_coding MGP_CBAJ_T0096792.1 MGP_CBAJ_G0035699.1 mouse_genomes_project X 124449420 125155003 + MGP_CBAJ_P0096792 Pcdh11x protein_coding protein_coding MGP_CBAJ_T0096793.1 MGP_CBAJ_G0035699.1 mouse_genomes_project X 124449488 124451626 + Pcdh11x protein_coding retained_intron MGP_CBAJ_T0096794.1 MGP_CBAJ_G0035699.1 mouse_genomes_project X 124449488 125159366 + MGP_CBAJ_P0096794 Pcdh11x protein_coding protein_coding MGP_CBAJ_T0096795.1 MGP_CBAJ_G0035699.1 mouse_genomes_project X 124449564 125155003 + MGP_CBAJ_P0096795 Pcdh11x protein_coding nonsense_mediated_decay MGP_CBAJ_T0096796.1 MGP_CBAJ_G0035699.1 mouse_genomes_project X 124532562 125159354 + MGP_CBAJ_P0096796 Pcdh11x protein_coding protein_coding MGP_CBAJ_T0096797.1 MGP_CBAJ_G0035699.1 mouse_genomes_project X 124533248 124583551 + MGP_CBAJ_P0096797 Pcdh11x protein_coding protein_coding MGP_CBAJ_T0096798.1 MGP_CBAJ_G0035699.1 mouse_genomes_project X 124567682 125155003 + MGP_CBAJ_P0096798 Pcdh11x protein_coding protein_coding MGP_CBAJ_T0096799.1 MGP_CBAJ_G0035699.1 mouse_genomes_project X 124567682 125155001 + MGP_CBAJ_P0096799 Pcdh11x protein_coding nonsense_mediated_decay MGP_CBAJ_T0016018.1 MGP_CBAJ_G0014130.1 mouse_genomes_project X 18413184 18415153 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015936.1 MGP_CBAJ_G0014048.1 mouse_genomes_project X 325045 326961 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096631.1 MGP_CBAJ_G0035648.1 mouse_genomes_project X 108528817 108529685 + MGP_CBAJ_P0096631 Cypt2 protein_coding protein_coding MGP_CBAJ_T0016469.1 MGP_CBAJ_G0014581.1 mouse_genomes_project X 134149550 134150336 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016420.1 MGP_CBAJ_G0014532.1 mouse_genomes_project X 118414708 118415146 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016193.1 MGP_CBAJ_G0014305.1 mouse_genomes_project X 75550336 75550984 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095117.1 MGP_CBAJ_G0035204.1 mouse_genomes_project X 3847710 3854578 + MGP_CBAJ_P0095117 protein_coding protein_coding MGP_CBAJ_T0095420.1 MGP_CBAJ_G0035314.1 mouse_genomes_project X 35209291 35223654 + Mcts1 protein_coding processed_transcript MGP_CBAJ_T0095421.1 MGP_CBAJ_G0035314.1 mouse_genomes_project X 35209367 35225162 + MGP_CBAJ_P0095421 Mcts1 protein_coding unknown_likely_coding MGP_CBAJ_T0095422.1 MGP_CBAJ_G0035314.1 mouse_genomes_project X 35209368 35225286 + MGP_CBAJ_P0095422 Mcts1 protein_coding protein_coding MGP_CBAJ_T0095423.1 MGP_CBAJ_G0035314.1 mouse_genomes_project X 35210012 35215838 + Mcts1 protein_coding processed_transcript MGP_CBAJ_T0095424.1 MGP_CBAJ_G0035314.1 mouse_genomes_project X 35220428 35225286 + Mcts1 protein_coding processed_transcript MGP_CBAJ_T0095425.1 MGP_CBAJ_G0035314.1 mouse_genomes_project X 35221623 35225260 + Mcts1 protein_coding processed_transcript MGP_CBAJ_T0095577.1 MGP_CBAJ_G0035356.1 mouse_genomes_project X 48440000 48500049 - MGP_CBAJ_P0095577 Frmd7 protein_coding protein_coding MGP_CBAJ_T0095578.1 MGP_CBAJ_G0035356.1 mouse_genomes_project X 48440000 48500049 - MGP_CBAJ_P0095578 Frmd7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0016473.1 MGP_CBAJ_G0014585.1 mouse_genomes_project X 135227308 135228990 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100927.1 MGP_CBAJ_G0039182.1 mouse_genomes_project X 34009115 34009258 + snoRNA snoRNA MGP_CBAJ_T0095008.1 MGP_CBAJ_G0035176.1 mouse_genomes_project X 2614948 2645672 + MGP_CBAJ_P0095008 Gripap1 protein_coding protein_coding MGP_CBAJ_T0095009.1 MGP_CBAJ_G0035176.1 mouse_genomes_project X 2615177 2637588 + MGP_CBAJ_P0095009 Gripap1 protein_coding protein_coding MGP_CBAJ_T0095010.1 MGP_CBAJ_G0035176.1 mouse_genomes_project X 2615178 2645668 + MGP_CBAJ_P0095010 Gripap1 protein_coding protein_coding MGP_CBAJ_T0095011.1 MGP_CBAJ_G0035176.1 mouse_genomes_project X 2615189 2619728 + Gripap1 protein_coding retained_intron MGP_CBAJ_T0095012.1 MGP_CBAJ_G0035176.1 mouse_genomes_project X 2615191 2645668 + MGP_CBAJ_P0095012 Gripap1 protein_coding protein_coding MGP_CBAJ_T0095013.1 MGP_CBAJ_G0035176.1 mouse_genomes_project X 2615195 2637588 + MGP_CBAJ_P0095013 Gripap1 protein_coding protein_coding MGP_CBAJ_T0095014.1 MGP_CBAJ_G0035176.1 mouse_genomes_project X 2615201 2645061 + Gripap1 protein_coding processed_transcript MGP_CBAJ_T0095015.1 MGP_CBAJ_G0035176.1 mouse_genomes_project X 2623630 2636074 + Gripap1 protein_coding retained_intron MGP_CBAJ_T0095016.1 MGP_CBAJ_G0035176.1 mouse_genomes_project X 2635512 2636061 + Gripap1 protein_coding processed_transcript MGP_CBAJ_T0095017.1 MGP_CBAJ_G0035176.1 mouse_genomes_project X 2644023 2645668 + Gripap1 protein_coding retained_intron MGP_CBAJ_T0099692.1 MGP_CBAJ_G0037947.1 mouse_genomes_project X 108002584 108002695 - Gm22090 snRNA snRNA MGP_CBAJ_T0095744.1 MGP_CBAJ_G0035421.1 mouse_genomes_project X 68274232 68274911 - MGP_CBAJ_P0095744 protein_coding protein_coding MGP_CBAJ_T0011099.1 MGP_CBAJ_G0009237.1 mouse_genomes_project X 158456080 158456188 + Mir98 miRNA miRNA MGP_CBAJ_T0010990.1 MGP_CBAJ_G0009128.1 mouse_genomes_project X 2017593 2017689 - Mir532 miRNA miRNA MGP_CBAJ_T0016357.1 MGP_CBAJ_G0014469.1 mouse_genomes_project X 106614470 106614956 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096497.1 MGP_CBAJ_G0035608.1 mouse_genomes_project X 103786294 103790098 - MGP_CBAJ_P0096497 Il2rg protein_coding protein_coding MGP_CBAJ_T0096498.1 MGP_CBAJ_G0035608.1 mouse_genomes_project X 103786854 103789277 - MGP_CBAJ_P0096498 Il2rg protein_coding protein_coding MGP_CBAJ_T0096499.1 MGP_CBAJ_G0035608.1 mouse_genomes_project X 103788508 103790033 - Il2rg protein_coding retained_intron MGP_CBAJ_T0096500.1 MGP_CBAJ_G0035608.1 mouse_genomes_project X 103789038 103790001 - Il2rg protein_coding processed_transcript MGP_CBAJ_T0095806.1 MGP_CBAJ_G0035439.1 mouse_genomes_project X 71893410 71894358 + MGP_CBAJ_P0095806 Magea4 protein_coding protein_coding MGP_CBAJ_T0095848.1 MGP_CBAJ_G0035458.1 mouse_genomes_project X 73336834 73415126 + MGP_CBAJ_P0095848 Atp2b3 protein_coding protein_coding MGP_CBAJ_T0095849.1 MGP_CBAJ_G0035458.1 mouse_genomes_project X 73336834 73402333 + MGP_CBAJ_P0095849 Atp2b3 protein_coding protein_coding MGP_CBAJ_T0095850.1 MGP_CBAJ_G0035458.1 mouse_genomes_project X 73336834 73415126 + MGP_CBAJ_P0095850 Atp2b3 protein_coding protein_coding MGP_CBAJ_T0011058.1 MGP_CBAJ_G0009196.1 mouse_genomes_project X 74277611 74277679 + Mir7092 miRNA miRNA MGP_CBAJ_T0096566.1 MGP_CBAJ_G0035620.1 mouse_genomes_project X 104707904 104712557 - MGP_CBAJ_P0096566 Rgag4 protein_coding protein_coding MGP_CBAJ_T0096567.1 MGP_CBAJ_G0035620.1 mouse_genomes_project X 104707904 104712665 - MGP_CBAJ_P0096567 Rgag4 protein_coding protein_coding MGP_CBAJ_T0096568.1 MGP_CBAJ_G0035620.1 mouse_genomes_project X 104708094 104708961 - Rgag4 protein_coding processed_transcript MGP_CBAJ_T0016456.1 MGP_CBAJ_G0014568.1 mouse_genomes_project X 126213714 126214833 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016128.1 MGP_CBAJ_G0014240.1 mouse_genomes_project X 60172238 60173081 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098140.1 MGP_CBAJ_G0036413.1 mouse_genomes_project X 105609084 105609185 - Gm24509 rRNA rRNA MGP_CBAJ_T0100949.1 MGP_CBAJ_G0039204.1 mouse_genomes_project X 103655297 103655417 - Gm24061 snoRNA snoRNA MGP_CBAJ_T0096362.1 MGP_CBAJ_G0035571.1 mouse_genomes_project X 97496225 97514665 - MGP_CBAJ_P0096362 Asb12 protein_coding protein_coding MGP_CBAJ_T0016645.1 MGP_CBAJ_G0014757.1 mouse_genomes_project X 170357770 170358456 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0102246.1 MGP_CBAJ_G0040275.1 mouse_genomes_project X 74762949 74764062 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0011069.1 MGP_CBAJ_G0009207.1 mouse_genomes_project X 106381169 106381264 - Mir374b miRNA miRNA MGP_CBAJ_T0095216.1 MGP_CBAJ_G0035238.1 mouse_genomes_project X 12859416 13065135 - MGP_CBAJ_P0095216 Efhc2 protein_coding protein_coding MGP_CBAJ_T0094957.1 MGP_CBAJ_G0035168.1 mouse_genomes_project X 2464304 2474904 + MGP_CBAJ_P0094957 Prickle3 protein_coding protein_coding MGP_CBAJ_T0094958.1 MGP_CBAJ_G0035168.1 mouse_genomes_project X 2464516 2468173 + Prickle3 protein_coding retained_intron MGP_CBAJ_T0094959.1 MGP_CBAJ_G0035168.1 mouse_genomes_project X 2465577 2482222 + MGP_CBAJ_P0094959 Prickle3 protein_coding protein_coding MGP_CBAJ_T0094960.1 MGP_CBAJ_G0035168.1 mouse_genomes_project X 2469801 2474904 + Prickle3 protein_coding retained_intron MGP_CBAJ_T0094961.1 MGP_CBAJ_G0035168.1 mouse_genomes_project X 2473068 2474108 + Prickle3 protein_coding retained_intron MGP_CBAJ_T0016102.1 MGP_CBAJ_G0014214.1 mouse_genomes_project X 54659172 54662740 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016101.1 MGP_CBAJ_G0014213.1 mouse_genomes_project X 54493555 54493846 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016036.1 MGP_CBAJ_G0014148.1 mouse_genomes_project X 35781973 35782229 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016251.1 MGP_CBAJ_G0014363.1 mouse_genomes_project X 89913163 89913421 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099671.1 MGP_CBAJ_G0037926.1 mouse_genomes_project X 54966523 54966688 + Gm26312 snRNA snRNA MGP_CBAJ_T0009285.1 MGP_CBAJ_G0007446.1 mouse_genomes_project X 86705984 86707755 + Gm14762 lincRNA lincRNA MGP_CBAJ_T0009286.1 MGP_CBAJ_G0007446.1 mouse_genomes_project X 86706753 86714928 + Gm14762 lincRNA lincRNA MGP_CBAJ_T0096951.1 MGP_CBAJ_G0035750.1 mouse_genomes_project X 141647596 141648207 - MGP_CBAJ_P0096951 Bex1 protein_coding protein_coding MGP_CBAJ_T0096952.1 MGP_CBAJ_G0035750.1 mouse_genomes_project X 141648167 141648586 - Bex1 protein_coding retained_intron MGP_CBAJ_T0016464.1 MGP_CBAJ_G0014576.1 mouse_genomes_project X 131405589 131405844 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016546.1 MGP_CBAJ_G0014658.1 mouse_genomes_project X 148423566 148424057 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016621.1 MGP_CBAJ_G0014733.1 mouse_genomes_project X 164736812 164737033 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015970.1 MGP_CBAJ_G0014082.1 mouse_genomes_project X 6987580 6987703 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0102269.1 MGP_CBAJ_G0040298.1 mouse_genomes_project X 109380521 109383863 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0097538.1 MGP_CBAJ_G0035901.1 mouse_genomes_project X 172146161 172168280 + MGP_CBAJ_P0097538 Asb11 protein_coding protein_coding MGP_CBAJ_T0097539.1 MGP_CBAJ_G0035901.1 mouse_genomes_project X 172146177 172156165 + Asb11 protein_coding retained_intron MGP_CBAJ_T0097540.1 MGP_CBAJ_G0035901.1 mouse_genomes_project X 172147225 172168274 + MGP_CBAJ_P0097540 Asb11 protein_coding protein_coding MGP_CBAJ_T0016291.1 MGP_CBAJ_G0014403.1 mouse_genomes_project X 96453489 96453898 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009291.1 MGP_CBAJ_G0007451.1 mouse_genomes_project X 97805598 97806387 - 1700010D01Rik lincRNA lincRNA MGP_CBAJ_T0096846.1 MGP_CBAJ_G0035717.1 mouse_genomes_project X 139258619 139279115 + MGP_CBAJ_P0096846 Arl13a protein_coding protein_coding MGP_CBAJ_T0096610.1 MGP_CBAJ_G0035636.1 mouse_genomes_project X 106203849 106215787 + MGP_CBAJ_P0096610 Tsx protein_coding protein_coding MGP_CBAJ_T0096344.1 MGP_CBAJ_G0035567.1 mouse_genomes_project X 96731932 96735485 - MGP_CBAJ_P0096344 Zxdb protein_coding protein_coding MGP_CBAJ_T0096917.1 MGP_CBAJ_G0035737.1 mouse_genomes_project X 140910861 140922448 - MGP_CBAJ_P0096917 Nxf7 protein_coding protein_coding MGP_CBAJ_T0096918.1 MGP_CBAJ_G0035737.1 mouse_genomes_project X 140911087 140925737 - MGP_CBAJ_P0096918 Nxf7 protein_coding protein_coding MGP_CBAJ_T0096919.1 MGP_CBAJ_G0035737.1 mouse_genomes_project X 140915658 140917412 - Nxf7 protein_coding retained_intron MGP_CBAJ_T0096920.1 MGP_CBAJ_G0035737.1 mouse_genomes_project X 140921910 140932225 - MGP_CBAJ_P0096920 Nxf7 protein_coding protein_coding MGP_CBAJ_T0096921.1 MGP_CBAJ_G0035737.1 mouse_genomes_project X 140922093 140930175 - MGP_CBAJ_P0096921 Nxf7 protein_coding protein_coding MGP_CBAJ_T0099660.1 MGP_CBAJ_G0037915.1 mouse_genomes_project X 18633560 18633663 + Gm25812 snRNA snRNA MGP_CBAJ_T0011649.1 MGP_CBAJ_G0009787.1 mouse_genomes_project X 142256839 142257132 + Gm23068 misc_RNA misc_RNA MGP_CBAJ_T0094917.1 MGP_CBAJ_G0035159.1 mouse_genomes_project X 1723868 1781606 - MGP_CBAJ_P0094917 Ccnb3 protein_coding protein_coding MGP_CBAJ_T0094918.1 MGP_CBAJ_G0035159.1 mouse_genomes_project X 1723868 1792622 - MGP_CBAJ_P0094918 Ccnb3 protein_coding protein_coding MGP_CBAJ_T0018418.1 MGP_CBAJ_G0015532.1 mouse_genomes_project X 145035738 145169202 - Platr21 processed_transcript processed_transcript MGP_CBAJ_T0018419.1 MGP_CBAJ_G0015532.1 mouse_genomes_project X 145159921 145170174 - Platr21 processed_transcript processed_transcript MGP_CBAJ_T0016622.1 MGP_CBAJ_G0014734.1 mouse_genomes_project X 165243992 165245076 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016121.1 MGP_CBAJ_G0014233.1 mouse_genomes_project X 59293545 59294339 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095606.1 MGP_CBAJ_G0035368.1 mouse_genomes_project X 51023677 51050019 - MGP_CBAJ_P0095606 Fam122b protein_coding protein_coding MGP_CBAJ_T0095607.1 MGP_CBAJ_G0035368.1 mouse_genomes_project X 51023687 51049233 - MGP_CBAJ_P0095607 Fam122b protein_coding protein_coding MGP_CBAJ_T0095608.1 MGP_CBAJ_G0035368.1 mouse_genomes_project X 51024008 51050012 - MGP_CBAJ_P0095608 Fam122b protein_coding protein_coding MGP_CBAJ_T0095609.1 MGP_CBAJ_G0035368.1 mouse_genomes_project X 51025124 51050019 - Fam122b protein_coding processed_transcript MGP_CBAJ_T0095123.1 MGP_CBAJ_G0035210.1 mouse_genomes_project X 4380372 4386345 - MGP_CBAJ_P0095123 Gm14862 protein_coding protein_coding MGP_CBAJ_T0016571.1 MGP_CBAJ_G0014683.1 mouse_genomes_project X 152235529 152235896 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096804.1 MGP_CBAJ_G0035704.1 mouse_genomes_project X 131489615 131511230 + MGP_CBAJ_P0096804 Gm382 protein_coding protein_coding MGP_CBAJ_T0097467.1 MGP_CBAJ_G0035883.1 mouse_genomes_project X 169871975 170038543 - MGP_CBAJ_P0097467 Reps2 protein_coding protein_coding MGP_CBAJ_T0097468.1 MGP_CBAJ_G0035883.1 mouse_genomes_project X 169871975 170129085 - MGP_CBAJ_P0097468 Reps2 protein_coding protein_coding MGP_CBAJ_T0097469.1 MGP_CBAJ_G0035883.1 mouse_genomes_project X 169871975 170129133 - MGP_CBAJ_P0097469 Reps2 protein_coding protein_coding MGP_CBAJ_T0097470.1 MGP_CBAJ_G0035883.1 mouse_genomes_project X 169995563 170038641 - Reps2 protein_coding processed_transcript MGP_CBAJ_T0097471.1 MGP_CBAJ_G0035883.1 mouse_genomes_project X 170016808 170023168 - Reps2 protein_coding retained_intron MGP_CBAJ_T0096247.1 MGP_CBAJ_G0035537.1 mouse_genomes_project X 84108282 84109700 - MGP_CBAJ_P0096247 Tsga8 protein_coding protein_coding MGP_CBAJ_T0005509.1 MGP_CBAJ_G0004637.1 mouse_genomes_project X 73227396 73236592 - Gm26726 antisense antisense MGP_CBAJ_T0016002.1 MGP_CBAJ_G0014114.1 mouse_genomes_project X 15311611 15312107 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096734.1 MGP_CBAJ_G0035676.1 mouse_genomes_project X 113283619 113285433 + MGP_CBAJ_P0096734 protein_coding protein_coding MGP_CBAJ_T0096692.1 MGP_CBAJ_G0035663.1 mouse_genomes_project X 110258451 110274772 + MGP_CBAJ_P0096692 P2ry10 protein_coding protein_coding MGP_CBAJ_T0096693.1 MGP_CBAJ_G0035663.1 mouse_genomes_project X 110259193 110274776 + MGP_CBAJ_P0096693 P2ry10 protein_coding protein_coding MGP_CBAJ_T0096694.1 MGP_CBAJ_G0035663.1 mouse_genomes_project X 110259237 110274776 + MGP_CBAJ_P0096694 P2ry10 protein_coding protein_coding MGP_CBAJ_T0011082.1 MGP_CBAJ_G0009220.1 mouse_genomes_project X 141141781 141141885 - Mir1970 miRNA miRNA MGP_CBAJ_T0095336.1 MGP_CBAJ_G0035275.1 mouse_genomes_project X 32725411 32739656 + Lonrf3 protein_coding retained_intron MGP_CBAJ_T0095337.1 MGP_CBAJ_G0035275.1 mouse_genomes_project X 32725411 32759296 + MGP_CBAJ_P0095337 Lonrf3 protein_coding protein_coding MGP_CBAJ_T0095338.1 MGP_CBAJ_G0035275.1 mouse_genomes_project X 32726274 32738799 + MGP_CBAJ_P0095338 Lonrf3 protein_coding protein_coding MGP_CBAJ_T0016483.1 MGP_CBAJ_G0014595.1 mouse_genomes_project X 138045350 138046973 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095043.1 MGP_CBAJ_G0035182.1 mouse_genomes_project X 2734345 2744807 + MGP_CBAJ_P0095043 Timm17b protein_coding protein_coding MGP_CBAJ_T0095044.1 MGP_CBAJ_G0035182.1 mouse_genomes_project X 2734659 2742786 + MGP_CBAJ_P0095044 Timm17b protein_coding protein_coding MGP_CBAJ_T0095045.1 MGP_CBAJ_G0035182.1 mouse_genomes_project X 2742569 2743426 + Timm17b protein_coding retained_intron MGP_CBAJ_T0016209.1 MGP_CBAJ_G0014321.1 mouse_genomes_project X 78579114 78579445 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098131.1 MGP_CBAJ_G0036404.1 mouse_genomes_project X 14162899 14163018 - n-R5s5 rRNA rRNA MGP_CBAJ_T0100962.1 MGP_CBAJ_G0039217.1 mouse_genomes_project X 140681085 140681199 - Gm25868 snoRNA snoRNA MGP_CBAJ_T0016087.1 MGP_CBAJ_G0014199.1 mouse_genomes_project X 49264487 49264685 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096292.1 MGP_CBAJ_G0035555.1 mouse_genomes_project X 95073120 95075058 + Arx protein_coding retained_intron MGP_CBAJ_T0096293.1 MGP_CBAJ_G0035555.1 mouse_genomes_project X 95073171 95084984 + MGP_CBAJ_P0096293 Arx protein_coding protein_coding MGP_CBAJ_T0096294.1 MGP_CBAJ_G0035555.1 mouse_genomes_project X 95073185 95084689 + MGP_CBAJ_P0096294 Arx protein_coding protein_coding MGP_CBAJ_T0097057.1 MGP_CBAJ_G0035786.1 mouse_genomes_project X 145960527 146005818 + MGP_CBAJ_P0097057 Pih1h3b protein_coding protein_coding MGP_CBAJ_T0096757.1 MGP_CBAJ_G0035684.1 mouse_genomes_project X 115782777 115849420 + MGP_CBAJ_P0096757 Apool protein_coding protein_coding MGP_CBAJ_T0096758.1 MGP_CBAJ_G0035684.1 mouse_genomes_project X 115782791 115822954 + Apool protein_coding retained_intron MGP_CBAJ_T0096759.1 MGP_CBAJ_G0035684.1 mouse_genomes_project X 115782809 115849100 + MGP_CBAJ_P0096759 Apool protein_coding protein_coding MGP_CBAJ_T0102263.1 MGP_CBAJ_G0040292.1 mouse_genomes_project X 96732796 96735379 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0097308.1 MGP_CBAJ_G0035838.1 mouse_genomes_project X 158925795 158953205 - MGP_CBAJ_P0097308 Gpr173 protein_coding protein_coding MGP_CBAJ_T0097309.1 MGP_CBAJ_G0035838.1 mouse_genomes_project X 158951516 158953205 - Gpr173 protein_coding processed_transcript MGP_CBAJ_T0005522.1 MGP_CBAJ_G0004649.1 mouse_genomes_project X 150535700 150555832 + antisense antisense MGP_CBAJ_T0005523.1 MGP_CBAJ_G0004649.1 mouse_genomes_project X 150549839 150555829 + antisense antisense MGP_CBAJ_T0096581.1 MGP_CBAJ_G0035625.1 mouse_genomes_project X 104974868 105210079 - MGP_CBAJ_P0096581 Hdac8 protein_coding protein_coding MGP_CBAJ_T0096582.1 MGP_CBAJ_G0035625.1 mouse_genomes_project X 105101924 105209801 - MGP_CBAJ_P0096582 Hdac8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0096583.1 MGP_CBAJ_G0035625.1 mouse_genomes_project X 105103879 105209866 - Hdac8 protein_coding processed_transcript MGP_CBAJ_T0096584.1 MGP_CBAJ_G0035625.1 mouse_genomes_project X 105110615 105210065 - Hdac8 protein_coding processed_transcript MGP_CBAJ_T0096585.1 MGP_CBAJ_G0035625.1 mouse_genomes_project X 105202876 105209461 - Hdac8 protein_coding retained_intron MGP_CBAJ_T0015962.1 MGP_CBAJ_G0014074.1 mouse_genomes_project X 4416807 4417071 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096736.1 MGP_CBAJ_G0035678.1 mouse_genomes_project X 114617593 114627779 + MGP_CBAJ_P0096736 Cylc1 protein_coding protein_coding MGP_CBAJ_T0096386.1 MGP_CBAJ_G0035579.1 mouse_genomes_project X 98651810 98773395 + MGP_CBAJ_P0096386 Heph protein_coding protein_coding MGP_CBAJ_T0096387.1 MGP_CBAJ_G0035579.1 mouse_genomes_project X 98652824 98741713 + MGP_CBAJ_P0096387 Heph protein_coding protein_coding MGP_CBAJ_T0096388.1 MGP_CBAJ_G0035579.1 mouse_genomes_project X 98652841 98773392 + MGP_CBAJ_P0096388 Heph protein_coding protein_coding MGP_CBAJ_T0096389.1 MGP_CBAJ_G0035579.1 mouse_genomes_project X 98652879 98681282 + Heph protein_coding retained_intron MGP_CBAJ_T0096390.1 MGP_CBAJ_G0035579.1 mouse_genomes_project X 98652879 98695684 + Heph protein_coding retained_intron MGP_CBAJ_T0096491.1 MGP_CBAJ_G0035605.1 mouse_genomes_project X 103774758 103782790 + MGP_CBAJ_P0096491 Foxo4 protein_coding protein_coding MGP_CBAJ_T0096492.1 MGP_CBAJ_G0035605.1 mouse_genomes_project X 103774797 103776666 + Foxo4 protein_coding processed_transcript MGP_CBAJ_T0096493.1 MGP_CBAJ_G0035605.1 mouse_genomes_project X 103775051 103779464 + MGP_CBAJ_P0096493 Foxo4 protein_coding protein_coding MGP_CBAJ_T0098130.1 MGP_CBAJ_G0036403.1 mouse_genomes_project X 8691734 8691846 - n-R5s3 rRNA rRNA MGP_CBAJ_T0016589.1 MGP_CBAJ_G0014701.1 mouse_genomes_project X 158182067 158182982 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096723.1 MGP_CBAJ_G0035672.1 mouse_genomes_project X 112025403 112141881 - MGP_CBAJ_P0096723 Brwd3 protein_coding protein_coding MGP_CBAJ_T0096724.1 MGP_CBAJ_G0035672.1 mouse_genomes_project X 112030954 112141905 - MGP_CBAJ_P0096724 Brwd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0096725.1 MGP_CBAJ_G0035672.1 mouse_genomes_project X 112030954 112141905 - MGP_CBAJ_P0096725 Brwd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0096726.1 MGP_CBAJ_G0035672.1 mouse_genomes_project X 112109074 112141873 - Brwd3 protein_coding retained_intron MGP_CBAJ_T0096727.1 MGP_CBAJ_G0035672.1 mouse_genomes_project X 112128628 112141879 - MGP_CBAJ_P0096727 Brwd3 protein_coding protein_coding MGP_CBAJ_T0095347.1 MGP_CBAJ_G0035280.1 mouse_genomes_project X 33148633 33182192 + MGP_CBAJ_P0095347 Slc25a43 protein_coding protein_coding MGP_CBAJ_T0095348.1 MGP_CBAJ_G0035280.1 mouse_genomes_project X 33148685 33181275 + Slc25a43 protein_coding processed_transcript MGP_CBAJ_T0097426.1 MGP_CBAJ_G0035873.1 mouse_genomes_project X 167378591 167394721 - MGP_CBAJ_P0097426 Pdha1 protein_coding protein_coding MGP_CBAJ_T0097427.1 MGP_CBAJ_G0035873.1 mouse_genomes_project X 167383673 167385348 - Pdha1 protein_coding retained_intron MGP_CBAJ_T0097428.1 MGP_CBAJ_G0035873.1 mouse_genomes_project X 167385670 167394617 - Pdha1 protein_coding retained_intron MGP_CBAJ_T0097429.1 MGP_CBAJ_G0035873.1 mouse_genomes_project X 167393204 167394664 - Pdha1 protein_coding processed_transcript MGP_CBAJ_T0098149.1 MGP_CBAJ_G0036422.1 mouse_genomes_project X 171803714 171803835 + n-R5s18 rRNA rRNA MGP_CBAJ_T0016600.1 MGP_CBAJ_G0014712.1 mouse_genomes_project X 160510888 160511168 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011049.1 MGP_CBAJ_G0009187.1 mouse_genomes_project X 71157056 71157148 - Gm23945 miRNA miRNA MGP_CBAJ_T0016395.1 MGP_CBAJ_G0014507.1 mouse_genomes_project X 113283662 113285214 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099652.1 MGP_CBAJ_G0037907.1 mouse_genomes_project X 9523789 9523880 - Gm25552 snRNA snRNA MGP_CBAJ_T0009278.1 MGP_CBAJ_G0007439.1 mouse_genomes_project X 59687349 59720067 + Gm14664 lincRNA lincRNA MGP_CBAJ_T0009270.1 MGP_CBAJ_G0007434.1 mouse_genomes_project X 35330903 35370479 - Gm14565 lincRNA lincRNA MGP_CBAJ_T0097081.1 MGP_CBAJ_G0035795.1 mouse_genomes_project X 147071334 147399735 - MGP_CBAJ_P0097081 Col4a6 protein_coding protein_coding MGP_CBAJ_T0097082.1 MGP_CBAJ_G0035795.1 mouse_genomes_project X 147092120 147114280 - Col4a6 protein_coding processed_transcript MGP_CBAJ_T0097083.1 MGP_CBAJ_G0035795.1 mouse_genomes_project X 147095752 147098637 - Col4a6 protein_coding retained_intron MGP_CBAJ_T0099686.1 MGP_CBAJ_G0037941.1 mouse_genomes_project X 101141269 101141376 + Gm26000 snRNA snRNA MGP_CBAJ_T0011004.1 MGP_CBAJ_G0009142.1 mouse_genomes_project X 38508001 38508086 + Gm22413 miRNA miRNA MGP_CBAJ_T0097447.1 MGP_CBAJ_G0035877.1 mouse_genomes_project X 168075334 168108088 + MGP_CBAJ_P0097447 Rs1 protein_coding protein_coding MGP_CBAJ_T0097448.1 MGP_CBAJ_G0035877.1 mouse_genomes_project X 168075501 168103278 + MGP_CBAJ_P0097448 Rs1 protein_coding protein_coding MGP_CBAJ_T0097452.1 MGP_CBAJ_G0035877.1 mouse_genomes_project X 168099935 168103775 + Rs1 protein_coding processed_transcript MGP_CBAJ_T0100965.1 MGP_CBAJ_G0039220.1 mouse_genomes_project X 142768410 142768529 + Gm23679 snoRNA snoRNA MGP_CBAJ_T0099683.1 MGP_CBAJ_G0037938.1 mouse_genomes_project X 82698956 82699056 + Gm22686 snRNA snRNA MGP_CBAJ_T0102235.1 MGP_CBAJ_G0040264.1 mouse_genomes_project X 8656303 8656441 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016580.1 MGP_CBAJ_G0014692.1 mouse_genomes_project X 156869274 156869553 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097097.1 MGP_CBAJ_G0035803.1 mouse_genomes_project X 148320474 148406224 - MGP_CBAJ_P0097097 Acsl4 protein_coding protein_coding MGP_CBAJ_T0097098.1 MGP_CBAJ_G0035803.1 mouse_genomes_project X 148323144 148331873 - Acsl4 protein_coding processed_transcript MGP_CBAJ_T0097099.1 MGP_CBAJ_G0035803.1 mouse_genomes_project X 148323150 148406208 - MGP_CBAJ_P0097099 Acsl4 protein_coding protein_coding MGP_CBAJ_T0100926.1 MGP_CBAJ_G0039181.1 mouse_genomes_project X 33524606 33524737 - Snora69 snoRNA snoRNA MGP_CBAJ_T0102278.1 MGP_CBAJ_G0040307.1 mouse_genomes_project X 160921104 160921587 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099709.1 MGP_CBAJ_G0037964.1 mouse_genomes_project X 146657084 146657191 + Gm23199 snRNA snRNA MGP_CBAJ_T0095090.1 MGP_CBAJ_G0035195.1 mouse_genomes_project X 3084825 3092799 - MGP_CBAJ_P0095090 Ebp protein_coding protein_coding MGP_CBAJ_T0095091.1 MGP_CBAJ_G0035195.1 mouse_genomes_project X 3084827 3086671 - Ebp protein_coding retained_intron MGP_CBAJ_T0095092.1 MGP_CBAJ_G0035195.1 mouse_genomes_project X 3086244 3092687 - MGP_CBAJ_P0095092 Ebp protein_coding protein_coding MGP_CBAJ_T0095093.1 MGP_CBAJ_G0035195.1 mouse_genomes_project X 3089198 3092185 - Ebp protein_coding retained_intron MGP_CBAJ_T0100976.1 MGP_CBAJ_G0039231.1 mouse_genomes_project X 165490506 165490657 + Gm22522 snoRNA snoRNA MGP_CBAJ_T0095810.1 MGP_CBAJ_G0035441.1 mouse_genomes_project X 72063793 72068782 - MGP_CBAJ_P0095810 Magea10 protein_coding protein_coding MGP_CBAJ_T0096971.1 MGP_CBAJ_G0035760.1 mouse_genomes_project X 142390369 142411458 + MGP_CBAJ_P0096971 Plp1 protein_coding protein_coding MGP_CBAJ_T0096972.1 MGP_CBAJ_G0035760.1 mouse_genomes_project X 142390488 142409337 + MGP_CBAJ_P0096972 Plp1 protein_coding protein_coding MGP_CBAJ_T0096973.1 MGP_CBAJ_G0035760.1 mouse_genomes_project X 142400876 142402307 + Plp1 protein_coding retained_intron MGP_CBAJ_T0096974.1 MGP_CBAJ_G0035760.1 mouse_genomes_project X 142402965 142406301 + Plp1 protein_coding retained_intron MGP_CBAJ_T0095161.1 MGP_CBAJ_G0035222.1 mouse_genomes_project X 7376913 7423437 - MGP_CBAJ_P0095161 Bcor protein_coding protein_coding MGP_CBAJ_T0095162.1 MGP_CBAJ_G0035222.1 mouse_genomes_project X 7376913 7423437 - MGP_CBAJ_P0095162 Bcor protein_coding protein_coding MGP_CBAJ_T0095163.1 MGP_CBAJ_G0035222.1 mouse_genomes_project X 7376913 7423437 - MGP_CBAJ_P0095163 Bcor protein_coding protein_coding MGP_CBAJ_T0095164.1 MGP_CBAJ_G0035222.1 mouse_genomes_project X 7376913 7423437 - MGP_CBAJ_P0095164 Bcor protein_coding protein_coding MGP_CBAJ_T0095165.1 MGP_CBAJ_G0035222.1 mouse_genomes_project X 7376916 7518074 - MGP_CBAJ_P0095165 Bcor protein_coding protein_coding MGP_CBAJ_T0095166.1 MGP_CBAJ_G0035222.1 mouse_genomes_project X 7399126 7480045 - MGP_CBAJ_P0095166 Bcor protein_coding protein_coding MGP_CBAJ_T0095167.1 MGP_CBAJ_G0035222.1 mouse_genomes_project X 7399216 7479995 - MGP_CBAJ_P0095167 Bcor protein_coding protein_coding MGP_CBAJ_T0016370.1 MGP_CBAJ_G0014482.1 mouse_genomes_project X 108333897 108334634 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095525.1 MGP_CBAJ_G0035339.1 mouse_genomes_project X 45849375 45901001 - MGP_CBAJ_P0095525 Elf4 protein_coding protein_coding MGP_CBAJ_T0095526.1 MGP_CBAJ_G0035339.1 mouse_genomes_project X 45849378 45909963 - MGP_CBAJ_P0095526 Elf4 protein_coding protein_coding MGP_CBAJ_T0095527.1 MGP_CBAJ_G0035339.1 mouse_genomes_project X 45854990 45909963 - MGP_CBAJ_P0095527 Elf4 protein_coding protein_coding MGP_CBAJ_T0005520.1 MGP_CBAJ_G0004647.1 mouse_genomes_project X 106221990 106282286 + Tsix antisense antisense MGP_CBAJ_T0018370.1 MGP_CBAJ_G0015519.1 mouse_genomes_project X 59763006 59781892 + C230004F18Rik processed_transcript processed_transcript MGP_CBAJ_T0018371.1 MGP_CBAJ_G0015519.1 mouse_genomes_project X 59763006 59789388 + C230004F18Rik processed_transcript processed_transcript MGP_CBAJ_T0018372.1 MGP_CBAJ_G0015519.1 mouse_genomes_project X 59763006 59832209 + C230004F18Rik processed_transcript processed_transcript MGP_CBAJ_T0018373.1 MGP_CBAJ_G0015519.1 mouse_genomes_project X 59763006 59767751 + C230004F18Rik processed_transcript processed_transcript MGP_CBAJ_T0018374.1 MGP_CBAJ_G0015519.1 mouse_genomes_project X 59763018 59832209 + C230004F18Rik processed_transcript processed_transcript MGP_CBAJ_T0016257.1 MGP_CBAJ_G0014369.1 mouse_genomes_project X 90330930 90331889 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016398.1 MGP_CBAJ_G0014510.1 mouse_genomes_project X 114076665 114079294 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096738.1 MGP_CBAJ_G0035680.1 mouse_genomes_project X 114744835 114852721 - MGP_CBAJ_P0096738 Rps6ka6 protein_coding protein_coding MGP_CBAJ_T0096739.1 MGP_CBAJ_G0035680.1 mouse_genomes_project X 114744835 114852873 - MGP_CBAJ_P0096739 Rps6ka6 protein_coding protein_coding MGP_CBAJ_T0096740.1 MGP_CBAJ_G0035680.1 mouse_genomes_project X 114744836 114880081 - MGP_CBAJ_P0096740 Rps6ka6 protein_coding protein_coding MGP_CBAJ_T0096741.1 MGP_CBAJ_G0035680.1 mouse_genomes_project X 114744836 114852873 - MGP_CBAJ_P0096741 Rps6ka6 protein_coding protein_coding MGP_CBAJ_T0096742.1 MGP_CBAJ_G0035680.1 mouse_genomes_project X 114746422 114852783 - MGP_CBAJ_P0096742 Rps6ka6 protein_coding protein_coding MGP_CBAJ_T0096743.1 MGP_CBAJ_G0035680.1 mouse_genomes_project X 114814280 114880060 - MGP_CBAJ_P0096743 Rps6ka6 protein_coding protein_coding MGP_CBAJ_T0096744.1 MGP_CBAJ_G0035680.1 mouse_genomes_project X 114814312 114853133 - MGP_CBAJ_P0096744 Rps6ka6 protein_coding protein_coding MGP_CBAJ_T0096745.1 MGP_CBAJ_G0035680.1 mouse_genomes_project X 114815219 114932700 - MGP_CBAJ_P0096745 Rps6ka6 protein_coding protein_coding MGP_CBAJ_T0096746.1 MGP_CBAJ_G0035680.1 mouse_genomes_project X 114819937 114852317 - MGP_CBAJ_P0096746 Rps6ka6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0096747.1 MGP_CBAJ_G0035680.1 mouse_genomes_project X 114820014 114943197 - MGP_CBAJ_P0096747 Rps6ka6 protein_coding protein_coding MGP_CBAJ_T0096748.1 MGP_CBAJ_G0035680.1 mouse_genomes_project X 114827025 114943209 - MGP_CBAJ_P0096748 Rps6ka6 protein_coding protein_coding MGP_CBAJ_T0096749.1 MGP_CBAJ_G0035680.1 mouse_genomes_project X 114833131 114941591 - MGP_CBAJ_P0096749 Rps6ka6 protein_coding protein_coding MGP_CBAJ_T0097401.1 MGP_CBAJ_G0035869.1 mouse_genomes_project X 166616249 166708927 + MGP_CBAJ_P0097401 Map7d2 protein_coding protein_coding MGP_CBAJ_T0097402.1 MGP_CBAJ_G0035869.1 mouse_genomes_project X 166651071 166701184 + MGP_CBAJ_P0097402 Map7d2 protein_coding protein_coding MGP_CBAJ_T0097403.1 MGP_CBAJ_G0035869.1 mouse_genomes_project X 166666006 166696970 + MGP_CBAJ_P0097403 Map7d2 protein_coding protein_coding MGP_CBAJ_T0097404.1 MGP_CBAJ_G0035869.1 mouse_genomes_project X 166666018 166677386 + MGP_CBAJ_P0097404 Map7d2 protein_coding protein_coding MGP_CBAJ_T0016258.1 MGP_CBAJ_G0014370.1 mouse_genomes_project X 90353091 90354571 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096572.1 MGP_CBAJ_G0035622.1 mouse_genomes_project X 104794671 104809700 - MGP_CBAJ_P0096572 Ercc6l protein_coding protein_coding MGP_CBAJ_T0016028.1 MGP_CBAJ_G0014140.1 mouse_genomes_project X 32773681 32773993 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016160.1 MGP_CBAJ_G0014272.1 mouse_genomes_project X 67847492 67848498 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016369.1 MGP_CBAJ_G0014481.1 mouse_genomes_project X 108126739 108127707 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016086.1 MGP_CBAJ_G0014198.1 mouse_genomes_project X 48846430 48847119 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011646.1 MGP_CBAJ_G0009784.1 mouse_genomes_project X 133908353 133908631 - Gm22225 misc_RNA misc_RNA MGP_CBAJ_T0016528.1 MGP_CBAJ_G0014640.1 mouse_genomes_project X 146795366 146797905 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016375.1 MGP_CBAJ_G0014487.1 mouse_genomes_project X 108744241 108744628 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016107.1 MGP_CBAJ_G0014219.1 mouse_genomes_project X 56086788 56087374 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095613.1 MGP_CBAJ_G0035370.1 mouse_genomes_project X 51127799 51153535 - MGP_CBAJ_P0095613 Mospd1 protein_coding unknown_likely_coding MGP_CBAJ_T0095614.1 MGP_CBAJ_G0035370.1 mouse_genomes_project X 51128658 51153519 - MGP_CBAJ_P0095614 Mospd1 protein_coding protein_coding MGP_CBAJ_T0097411.1 MGP_CBAJ_G0035871.1 mouse_genomes_project X 166854424 167223388 + MGP_CBAJ_P0097411 Sh3kbp1 protein_coding protein_coding MGP_CBAJ_T0097412.1 MGP_CBAJ_G0035871.1 mouse_genomes_project X 166854693 167159427 + Sh3kbp1 protein_coding retained_intron MGP_CBAJ_T0097413.1 MGP_CBAJ_G0035871.1 mouse_genomes_project X 166854693 167216502 + MGP_CBAJ_P0097413 Sh3kbp1 protein_coding protein_coding MGP_CBAJ_T0097414.1 MGP_CBAJ_G0035871.1 mouse_genomes_project X 166926403 167099625 + MGP_CBAJ_P0097414 Sh3kbp1 protein_coding protein_coding MGP_CBAJ_T0097415.1 MGP_CBAJ_G0035871.1 mouse_genomes_project X 166937679 167217500 + MGP_CBAJ_P0097415 Sh3kbp1 protein_coding protein_coding MGP_CBAJ_T0097416.1 MGP_CBAJ_G0035871.1 mouse_genomes_project X 166937679 167217198 + MGP_CBAJ_P0097416 Sh3kbp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0097417.1 MGP_CBAJ_G0035871.1 mouse_genomes_project X 167073910 167218997 + MGP_CBAJ_P0097417 Sh3kbp1 protein_coding protein_coding MGP_CBAJ_T0097418.1 MGP_CBAJ_G0035871.1 mouse_genomes_project X 167073923 167217500 + MGP_CBAJ_P0097418 Sh3kbp1 protein_coding protein_coding MGP_CBAJ_T0097419.1 MGP_CBAJ_G0035871.1 mouse_genomes_project X 167074476 167219249 + Sh3kbp1 protein_coding processed_transcript MGP_CBAJ_T0097420.1 MGP_CBAJ_G0035871.1 mouse_genomes_project X 167158200 167216652 + MGP_CBAJ_P0097420 Sh3kbp1 protein_coding protein_coding MGP_CBAJ_T0097421.1 MGP_CBAJ_G0035871.1 mouse_genomes_project X 167184010 167215221 + Sh3kbp1 protein_coding processed_transcript MGP_CBAJ_T0097422.1 MGP_CBAJ_G0035871.1 mouse_genomes_project X 167185006 167219250 + Sh3kbp1 protein_coding processed_transcript MGP_CBAJ_T0097423.1 MGP_CBAJ_G0035871.1 mouse_genomes_project X 167185225 167217500 + Sh3kbp1 protein_coding processed_transcript MGP_CBAJ_T0097424.1 MGP_CBAJ_G0035871.1 mouse_genomes_project X 167185331 167216523 + Sh3kbp1 protein_coding processed_transcript MGP_CBAJ_T0095392.1 MGP_CBAJ_G0035303.1 mouse_genomes_project X 34378505 34381111 - MGP_CBAJ_P0095392 protein_coding protein_coding MGP_CBAJ_T0095626.1 MGP_CBAJ_G0035382.1 mouse_genomes_project X 54669239 54725313 + Ddx26b protein_coding processed_transcript MGP_CBAJ_T0095627.1 MGP_CBAJ_G0035382.1 mouse_genomes_project X 54669259 54725312 + MGP_CBAJ_P0095627 Ddx26b protein_coding protein_coding MGP_CBAJ_T0095628.1 MGP_CBAJ_G0035382.1 mouse_genomes_project X 54669262 54713217 + MGP_CBAJ_P0095628 Ddx26b protein_coding protein_coding MGP_CBAJ_T0095629.1 MGP_CBAJ_G0035382.1 mouse_genomes_project X 54669267 54725313 + MGP_CBAJ_P0095629 Ddx26b protein_coding protein_coding MGP_CBAJ_T0095630.1 MGP_CBAJ_G0035382.1 mouse_genomes_project X 54669267 54725316 + MGP_CBAJ_P0095630 Ddx26b protein_coding nonsense_mediated_decay MGP_CBAJ_T0095631.1 MGP_CBAJ_G0035382.1 mouse_genomes_project X 54701315 54725311 + MGP_CBAJ_P0095631 Ddx26b protein_coding protein_coding MGP_CBAJ_T0095632.1 MGP_CBAJ_G0035382.1 mouse_genomes_project X 54722563 54725158 + MGP_CBAJ_P0095632 Ddx26b protein_coding protein_coding MGP_CBAJ_T0005534.1 MGP_CBAJ_G0004656.1 mouse_genomes_project X 175298361 175301338 + Gm15239 antisense antisense MGP_CBAJ_T0016266.1 MGP_CBAJ_G0014378.1 mouse_genomes_project X 92765273 92771856 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098168.1 MGP_CBAJ_G0036441.1 mouse_genomes_project X 57525317 57525549 - Gm26351 ribozyme ribozyme MGP_CBAJ_T0095528.1 MGP_CBAJ_G0035340.1 mouse_genomes_project X 45921605 45963181 - Aifm1 protein_coding retained_intron MGP_CBAJ_T0095529.1 MGP_CBAJ_G0035340.1 mouse_genomes_project X 45921605 45963314 - MGP_CBAJ_P0095529 Aifm1 protein_coding protein_coding MGP_CBAJ_T0095530.1 MGP_CBAJ_G0035340.1 mouse_genomes_project X 45921605 45963318 - MGP_CBAJ_P0095530 Aifm1 protein_coding protein_coding MGP_CBAJ_T0095531.1 MGP_CBAJ_G0035340.1 mouse_genomes_project X 45921606 45929562 - Aifm1 protein_coding processed_transcript MGP_CBAJ_T0095532.1 MGP_CBAJ_G0035340.1 mouse_genomes_project X 45932123 45933184 - Aifm1 protein_coding processed_transcript MGP_CBAJ_T0095168.1 MGP_CBAJ_G0035223.1 mouse_genomes_project X 7984033 7992814 + Atp6ap2 protein_coding retained_intron MGP_CBAJ_T0095169.1 MGP_CBAJ_G0035223.1 mouse_genomes_project X 7984033 8020905 + MGP_CBAJ_P0095169 Atp6ap2 protein_coding protein_coding MGP_CBAJ_T0095658.1 MGP_CBAJ_G0035390.1 mouse_genomes_project X 55321307 55326992 + MGP_CBAJ_P0095658 Brs3 protein_coding protein_coding MGP_CBAJ_T0096675.1 MGP_CBAJ_G0035656.1 mouse_genomes_project X 109255585 109269257 - MGP_CBAJ_P0096675 Taf9b protein_coding protein_coding MGP_CBAJ_T0096676.1 MGP_CBAJ_G0035656.1 mouse_genomes_project X 109255585 109268000 - MGP_CBAJ_P0096676 Taf9b protein_coding protein_coding MGP_CBAJ_T0096677.1 MGP_CBAJ_G0035656.1 mouse_genomes_project X 109266438 109268849 - MGP_CBAJ_P0096677 Taf9b protein_coding protein_coding MGP_CBAJ_T0016221.1 MGP_CBAJ_G0014333.1 mouse_genomes_project X 80565094 80565253 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095210.1 MGP_CBAJ_G0035235.1 mouse_genomes_project X 12304618 12382358 + MGP_CBAJ_P0095210 Maoa protein_coding protein_coding MGP_CBAJ_T0016183.1 MGP_CBAJ_G0014295.1 mouse_genomes_project X 74476465 74477298 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0102247.1 MGP_CBAJ_G0040276.1 mouse_genomes_project X 74783947 74784814 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016055.1 MGP_CBAJ_G0014167.1 mouse_genomes_project X 39825111 39825502 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096976.1 MGP_CBAJ_G0035762.1 mouse_genomes_project X 142500324 142501376 + MGP_CBAJ_P0096976 H2bfm protein_coding protein_coding MGP_CBAJ_T0099698.1 MGP_CBAJ_G0037953.1 mouse_genomes_project X 112338284 112338391 - Gm25797 snRNA snRNA MGP_CBAJ_T0011634.1 MGP_CBAJ_G0009772.1 mouse_genomes_project X 89062603 89062887 - Gm24812 misc_RNA misc_RNA MGP_CBAJ_T0096624.1 MGP_CBAJ_G0035643.1 mouse_genomes_project X 107378500 107406284 + MGP_CBAJ_P0096624 Uprt protein_coding protein_coding MGP_CBAJ_T0016094.1 MGP_CBAJ_G0014206.1 mouse_genomes_project X 51441637 51442267 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096586.1 MGP_CBAJ_G0035626.1 mouse_genomes_project X 105217818 105355038 - MGP_CBAJ_P0096586 Phka1 protein_coding protein_coding MGP_CBAJ_T0096587.1 MGP_CBAJ_G0035626.1 mouse_genomes_project X 105217818 105355038 - MGP_CBAJ_P0096587 Phka1 protein_coding protein_coding MGP_CBAJ_T0096588.1 MGP_CBAJ_G0035626.1 mouse_genomes_project X 105217818 105355038 - MGP_CBAJ_P0096588 Phka1 protein_coding protein_coding MGP_CBAJ_T0096589.1 MGP_CBAJ_G0035626.1 mouse_genomes_project X 105217818 105355038 - MGP_CBAJ_P0096589 Phka1 protein_coding protein_coding MGP_CBAJ_T0096590.1 MGP_CBAJ_G0035626.1 mouse_genomes_project X 105217818 105355038 - MGP_CBAJ_P0096590 Phka1 protein_coding protein_coding MGP_CBAJ_T0096591.1 MGP_CBAJ_G0035626.1 mouse_genomes_project X 105217818 105355038 - MGP_CBAJ_P0096591 Phka1 protein_coding protein_coding MGP_CBAJ_T0096592.1 MGP_CBAJ_G0035626.1 mouse_genomes_project X 105261835 105355038 - Phka1 protein_coding retained_intron MGP_CBAJ_T0102268.1 MGP_CBAJ_G0040297.1 mouse_genomes_project X 105431859 105569844 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099678.1 MGP_CBAJ_G0037933.1 mouse_genomes_project X 63895205 63895311 + Gm26111 snRNA snRNA MGP_CBAJ_T0018368.1 MGP_CBAJ_G0015518.1 mouse_genomes_project X 51529988 51531344 - processed_transcript TEC MGP_CBAJ_T0018369.1 MGP_CBAJ_G0015518.1 mouse_genomes_project X 51531001 51549009 - processed_transcript lincRNA MGP_CBAJ_T0096223.1 MGP_CBAJ_G0035530.1 mouse_genomes_project X 78674233 78844530 - MGP_CBAJ_P0096223 Prrg1 protein_coding protein_coding MGP_CBAJ_T0096224.1 MGP_CBAJ_G0035530.1 mouse_genomes_project X 78674233 78844639 - MGP_CBAJ_P0096224 Prrg1 protein_coding protein_coding MGP_CBAJ_T0096225.1 MGP_CBAJ_G0035530.1 mouse_genomes_project X 78674233 78844644 - MGP_CBAJ_P0096225 Prrg1 protein_coding protein_coding MGP_CBAJ_T0096226.1 MGP_CBAJ_G0035530.1 mouse_genomes_project X 78699304 78844603 - Prrg1 protein_coding processed_transcript MGP_CBAJ_T0096227.1 MGP_CBAJ_G0035530.1 mouse_genomes_project X 78714161 78844530 - Prrg1 protein_coding retained_intron MGP_CBAJ_T0096228.1 MGP_CBAJ_G0035530.1 mouse_genomes_project X 78714178 78844644 - Prrg1 protein_coding retained_intron MGP_CBAJ_T0096229.1 MGP_CBAJ_G0035530.1 mouse_genomes_project X 78717254 78844642 - MGP_CBAJ_P0096229 Prrg1 protein_coding protein_coding MGP_CBAJ_T0096230.1 MGP_CBAJ_G0035530.1 mouse_genomes_project X 78755624 78844639 - Prrg1 protein_coding retained_intron MGP_CBAJ_T0096231.1 MGP_CBAJ_G0035530.1 mouse_genomes_project X 78758630 78844638 - Prrg1 protein_coding retained_intron MGP_CBAJ_T0096232.1 MGP_CBAJ_G0035530.1 mouse_genomes_project X 78759096 78844600 - Prrg1 protein_coding processed_transcript MGP_CBAJ_T0016418.1 MGP_CBAJ_G0014530.1 mouse_genomes_project X 117806024 117806763 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016648.1 MGP_CBAJ_G0014760.1 mouse_genomes_project X 170781927 170782406 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096671.1 MGP_CBAJ_G0035654.1 mouse_genomes_project X 109190800 109191219 + Tlr13 protein_coding retained_intron MGP_CBAJ_T0096672.1 MGP_CBAJ_G0035654.1 mouse_genomes_project X 109190825 109208742 + MGP_CBAJ_P0096672 Tlr13 protein_coding protein_coding MGP_CBAJ_T0016027.1 MGP_CBAJ_G0014139.1 mouse_genomes_project X 32693657 32694153 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009319.1 MGP_CBAJ_G0007466.1 mouse_genomes_project X 146086679 146206795 - Gm15046 lincRNA lincRNA MGP_CBAJ_T0009334.1 MGP_CBAJ_G0007474.1 mouse_genomes_project X 169234619 169236473 - Scml1 lincRNA lincRNA MGP_CBAJ_T0100932.1 MGP_CBAJ_G0039187.1 mouse_genomes_project X 66903891 66904000 - Gm26276 snoRNA snoRNA MGP_CBAJ_T0100943.1 MGP_CBAJ_G0039198.1 mouse_genomes_project X 78798568 78798702 - Gm22843 snoRNA snoRNA MGP_CBAJ_T0097617.1 MGP_CBAJ_G0035921.1 mouse_genomes_project X 177242850 177253936 - MGP_CBAJ_P0097617 Amelx protein_coding protein_coding MGP_CBAJ_T0097618.1 MGP_CBAJ_G0035921.1 mouse_genomes_project X 177246758 177253936 - Amelx protein_coding processed_transcript MGP_CBAJ_T0097619.1 MGP_CBAJ_G0035921.1 mouse_genomes_project X 177246758 177253936 - MGP_CBAJ_P0097619 Amelx protein_coding protein_coding MGP_CBAJ_T0097620.1 MGP_CBAJ_G0035921.1 mouse_genomes_project X 177246758 177253936 - MGP_CBAJ_P0097620 Amelx protein_coding protein_coding MGP_CBAJ_T0097621.1 MGP_CBAJ_G0035921.1 mouse_genomes_project X 177246758 177253936 - MGP_CBAJ_P0097621 Amelx protein_coding protein_coding MGP_CBAJ_T0097284.1 MGP_CBAJ_G0035834.1 mouse_genomes_project X 158565993 158591399 + MGP_CBAJ_P0097284 Smc1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0097285.1 MGP_CBAJ_G0035834.1 mouse_genomes_project X 158565993 158618419 + MGP_CBAJ_P0097285 Smc1a protein_coding protein_coding MGP_CBAJ_T0097286.1 MGP_CBAJ_G0035834.1 mouse_genomes_project X 158591633 158593245 + Smc1a protein_coding retained_intron MGP_CBAJ_T0097287.1 MGP_CBAJ_G0035834.1 mouse_genomes_project X 158602366 158603674 + Smc1a protein_coding retained_intron MGP_CBAJ_T0097288.1 MGP_CBAJ_G0035834.1 mouse_genomes_project X 158614191 158615233 + Smc1a protein_coding retained_intron MGP_CBAJ_T0097289.1 MGP_CBAJ_G0035834.1 mouse_genomes_project X 158614799 158615505 + Smc1a protein_coding retained_intron MGP_CBAJ_T0096858.1 MGP_CBAJ_G0035721.1 mouse_genomes_project X 139519252 139572619 + MGP_CBAJ_P0096858 Drp2 protein_coding protein_coding MGP_CBAJ_T0096859.1 MGP_CBAJ_G0035721.1 mouse_genomes_project X 139519329 139576484 + MGP_CBAJ_P0096859 Drp2 protein_coding protein_coding MGP_CBAJ_T0096860.1 MGP_CBAJ_G0035721.1 mouse_genomes_project X 139519451 139573527 + MGP_CBAJ_P0096860 Drp2 protein_coding protein_coding MGP_CBAJ_T0096861.1 MGP_CBAJ_G0035721.1 mouse_genomes_project X 139519462 139572926 + MGP_CBAJ_P0096861 Drp2 protein_coding protein_coding MGP_CBAJ_T0096862.1 MGP_CBAJ_G0035721.1 mouse_genomes_project X 139540339 139555348 + Drp2 protein_coding processed_transcript MGP_CBAJ_T0096863.1 MGP_CBAJ_G0035721.1 mouse_genomes_project X 139540393 139573319 + Drp2 protein_coding retained_intron MGP_CBAJ_T0099661.1 MGP_CBAJ_G0037916.1 mouse_genomes_project X 19062476 19062586 + Gm26131 snRNA snRNA MGP_CBAJ_T0095206.1 MGP_CBAJ_G0035232.1 mouse_genomes_project X 9740952 9748296 + MGP_CBAJ_P0095206 Gm14501 protein_coding protein_coding MGP_CBAJ_T0101209.1 MGP_CBAJ_G0039364.1 mouse_genomes_project X 18672887 18673650 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101210.1 MGP_CBAJ_G0039364.1 mouse_genomes_project X 18672984 18673593 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0095220.1 MGP_CBAJ_G0035240.1 mouse_genomes_project X 13950679 13951524 + MGP_CBAJ_P0095220 Dusp21 protein_coding protein_coding MGP_CBAJ_T0096510.1 MGP_CBAJ_G0035610.1 mouse_genomes_project X 103820766 103840261 + MGP_CBAJ_P0096510 Nlgn3 protein_coding protein_coding MGP_CBAJ_T0096511.1 MGP_CBAJ_G0035610.1 mouse_genomes_project X 103820770 103847212 + MGP_CBAJ_P0096511 Nlgn3 protein_coding protein_coding MGP_CBAJ_T0096512.1 MGP_CBAJ_G0035610.1 mouse_genomes_project X 103820785 103847545 + MGP_CBAJ_P0096512 Nlgn3 protein_coding protein_coding MGP_CBAJ_T0096513.1 MGP_CBAJ_G0035610.1 mouse_genomes_project X 103822065 103823666 + Nlgn3 protein_coding processed_transcript MGP_CBAJ_T0096514.1 MGP_CBAJ_G0035610.1 mouse_genomes_project X 103835986 103839737 + Nlgn3 protein_coding processed_transcript MGP_CBAJ_T0016105.1 MGP_CBAJ_G0014217.1 mouse_genomes_project X 56063592 56065600 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100958.1 MGP_CBAJ_G0039213.1 mouse_genomes_project X 133746048 133746180 - Gm26029 snoRNA snoRNA MGP_CBAJ_T0016458.1 MGP_CBAJ_G0014570.1 mouse_genomes_project X 126555901 126556197 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016274.1 MGP_CBAJ_G0014386.1 mouse_genomes_project X 93469757 93469952 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095047.1 MGP_CBAJ_G0035184.1 mouse_genomes_project X 2746109 2746495 + MGP_CBAJ_P0095047 protein_coding protein_coding MGP_CBAJ_T0015960.1 MGP_CBAJ_G0014072.1 mouse_genomes_project X 4018862 4019525 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016446.1 MGP_CBAJ_G0014558.1 mouse_genomes_project X 124100969 124102258 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016364.1 MGP_CBAJ_G0014476.1 mouse_genomes_project X 107922452 107925304 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097637.1 MGP_CBAJ_G0035925.1 mouse_genomes_project X 178091482 178091791 - MGP_CBAJ_P0097637 Gm21860 protein_coding protein_coding MGP_CBAJ_T0011006.1 MGP_CBAJ_G0009144.1 mouse_genomes_project X 46103734 46103853 + Gm27828 miRNA miRNA MGP_CBAJ_T0099706.1 MGP_CBAJ_G0037961.1 mouse_genomes_project X 139620355 139620462 + Gm23124 snRNA snRNA MGP_CBAJ_T0016491.1 MGP_CBAJ_G0014603.1 mouse_genomes_project X 140021224 140022087 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016635.1 MGP_CBAJ_G0014747.1 mouse_genomes_project X 167625054 167631342 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096376.1 MGP_CBAJ_G0035576.1 mouse_genomes_project X 98284437 98363286 + MGP_CBAJ_P0096376 Msn protein_coding protein_coding MGP_CBAJ_T0096377.1 MGP_CBAJ_G0035576.1 mouse_genomes_project X 98284452 98347087 + Msn protein_coding processed_transcript MGP_CBAJ_T0096378.1 MGP_CBAJ_G0035576.1 mouse_genomes_project X 98284492 98345007 + Msn protein_coding processed_transcript MGP_CBAJ_T0016129.1 MGP_CBAJ_G0014241.1 mouse_genomes_project X 60321719 60322154 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016654.1 MGP_CBAJ_G0014766.1 mouse_genomes_project X 172184797 172187466 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016127.1 MGP_CBAJ_G0014239.1 mouse_genomes_project X 60068629 60069186 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016244.1 MGP_CBAJ_G0014356.1 mouse_genomes_project X 87803221 87803531 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096826.1 MGP_CBAJ_G0035712.1 mouse_genomes_project X 138955090 138977833 + MGP_CBAJ_P0096826 Srpx2 protein_coding protein_coding MGP_CBAJ_T0099700.1 MGP_CBAJ_G0037955.1 mouse_genomes_project X 116863377 116863503 - Gm24831 snRNA snRNA MGP_CBAJ_T0095236.1 MGP_CBAJ_G0035246.1 mouse_genomes_project X 16361140 16401363 + MGP_CBAJ_P0095236 Rp2 protein_coding protein_coding MGP_CBAJ_T0095237.1 MGP_CBAJ_G0035246.1 mouse_genomes_project X 16361140 16401359 + MGP_CBAJ_P0095237 Rp2 protein_coding protein_coding MGP_CBAJ_T0095238.1 MGP_CBAJ_G0035246.1 mouse_genomes_project X 16361218 16401359 + MGP_CBAJ_P0095238 Rp2 protein_coding protein_coding MGP_CBAJ_T0095239.1 MGP_CBAJ_G0035246.1 mouse_genomes_project X 16361234 16408247 + MGP_CBAJ_P0095239 Rp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0095240.1 MGP_CBAJ_G0035246.1 mouse_genomes_project X 16361278 16408224 + MGP_CBAJ_P0095240 Rp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0100979.1 MGP_CBAJ_G0039234.1 mouse_genomes_project X 171974665 171974795 + Gm22023 snoRNA snoRNA MGP_CBAJ_T0016614.1 MGP_CBAJ_G0014726.1 mouse_genomes_project X 164465490 164466400 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016320.1 MGP_CBAJ_G0014432.1 mouse_genomes_project X 102767898 102769036 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095207.1 MGP_CBAJ_G0035233.1 mouse_genomes_project X 12201627 12202448 + MGP_CBAJ_P0095207 Cypt1 protein_coding protein_coding MGP_CBAJ_T0095208.1 MGP_CBAJ_G0035233.1 mouse_genomes_project X 12201630 12202447 + MGP_CBAJ_P0095208 Cypt1 protein_coding protein_coding MGP_CBAJ_T0016661.1 MGP_CBAJ_G0014773.1 mouse_genomes_project X 174356367 174357193 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016065.1 MGP_CBAJ_G0014177.1 mouse_genomes_project X 42598379 42599534 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009259.1 MGP_CBAJ_G0007427.1 mouse_genomes_project X 11579928 11582571 - lincRNA lincRNA MGP_CBAJ_T0009260.1 MGP_CBAJ_G0007427.1 mouse_genomes_project X 11579928 11590162 - lincRNA lincRNA MGP_CBAJ_T0096869.1 MGP_CBAJ_G0035725.1 mouse_genomes_project X 139676758 139720942 - MGP_CBAJ_P0096869 Btk protein_coding protein_coding MGP_CBAJ_T0096870.1 MGP_CBAJ_G0035725.1 mouse_genomes_project X 139676792 139720930 - MGP_CBAJ_P0096870 Btk protein_coding protein_coding MGP_CBAJ_T0096871.1 MGP_CBAJ_G0035725.1 mouse_genomes_project X 139683648 139720942 - Btk protein_coding retained_intron MGP_CBAJ_T0096872.1 MGP_CBAJ_G0035725.1 mouse_genomes_project X 139704754 139720275 - Btk protein_coding processed_transcript MGP_CBAJ_T0096873.1 MGP_CBAJ_G0035725.1 mouse_genomes_project X 139711038 139721371 - Btk protein_coding processed_transcript MGP_CBAJ_T0096181.1 MGP_CBAJ_G0035510.1 mouse_genomes_project X 75493357 75505060 - MGP_CBAJ_P0096181 Cmc4 protein_coding protein_coding MGP_CBAJ_T0096182.1 MGP_CBAJ_G0035510.1 mouse_genomes_project X 75493537 75505079 - MGP_CBAJ_P0096182 Cmc4 protein_coding protein_coding MGP_CBAJ_T0096183.1 MGP_CBAJ_G0035510.1 mouse_genomes_project X 75493581 75498423 - MGP_CBAJ_P0096183 Cmc4 protein_coding protein_coding MGP_CBAJ_T0100938.1 MGP_CBAJ_G0039193.1 mouse_genomes_project X 74223020 74223157 + Snora70 snoRNA snoRNA MGP_CBAJ_T0096095.1 MGP_CBAJ_G0035490.1 mouse_genomes_project X 74335708 74338664 - MGP_CBAJ_P0096095 Ubl4a protein_coding protein_coding MGP_CBAJ_T0096096.1 MGP_CBAJ_G0035490.1 mouse_genomes_project X 74335709 74338549 - Ubl4a protein_coding processed_transcript MGP_CBAJ_T0096097.1 MGP_CBAJ_G0035490.1 mouse_genomes_project X 74337262 74338457 - MGP_CBAJ_P0096097 Ubl4a protein_coding nonsense_mediated_decay MGP_CBAJ_T0096098.1 MGP_CBAJ_G0035490.1 mouse_genomes_project X 74337300 74338487 - Ubl4a protein_coding retained_intron MGP_CBAJ_T0096099.1 MGP_CBAJ_G0035490.1 mouse_genomes_project X 74337455 74343205 - MGP_CBAJ_P0096099 Ubl4a protein_coding protein_coding MGP_CBAJ_T0096100.1 MGP_CBAJ_G0035490.1 mouse_genomes_project X 74337733 74338504 - Ubl4a protein_coding retained_intron MGP_CBAJ_T0096101.1 MGP_CBAJ_G0035490.1 mouse_genomes_project X 74337787 74338494 - Ubl4a protein_coding processed_transcript MGP_CBAJ_T0095958.1 MGP_CBAJ_G0035474.1 mouse_genomes_project X 73865930 73892413 - MGP_CBAJ_P0095958 Hcfc1 protein_coding protein_coding MGP_CBAJ_T0095959.1 MGP_CBAJ_G0035474.1 mouse_genomes_project X 73865933 73875313 - MGP_CBAJ_P0095959 Hcfc1 protein_coding protein_coding MGP_CBAJ_T0095960.1 MGP_CBAJ_G0035474.1 mouse_genomes_project X 73865935 73892407 - MGP_CBAJ_P0095960 Hcfc1 protein_coding protein_coding MGP_CBAJ_T0095961.1 MGP_CBAJ_G0035474.1 mouse_genomes_project X 73868459 73870571 - Hcfc1 protein_coding retained_intron MGP_CBAJ_T0095962.1 MGP_CBAJ_G0035474.1 mouse_genomes_project X 73870333 73871485 - Hcfc1 protein_coding processed_transcript MGP_CBAJ_T0095963.1 MGP_CBAJ_G0035474.1 mouse_genomes_project X 73881182 73883491 - Hcfc1 protein_coding processed_transcript MGP_CBAJ_T0096695.1 MGP_CBAJ_G0035664.1 mouse_genomes_project X 110324092 110350992 + MGP_CBAJ_P0096695 A630033H20Rik protein_coding protein_coding MGP_CBAJ_T0096696.1 MGP_CBAJ_G0035664.1 mouse_genomes_project X 110324092 110348732 + MGP_CBAJ_P0096696 A630033H20Rik protein_coding protein_coding MGP_CBAJ_T0096697.1 MGP_CBAJ_G0035664.1 mouse_genomes_project X 110324619 110350992 + MGP_CBAJ_P0096697 A630033H20Rik protein_coding protein_coding MGP_CBAJ_T0096698.1 MGP_CBAJ_G0035664.1 mouse_genomes_project X 110324619 110348758 + MGP_CBAJ_P0096698 A630033H20Rik protein_coding protein_coding MGP_CBAJ_T0096699.1 MGP_CBAJ_G0035664.1 mouse_genomes_project X 110324763 110348478 + MGP_CBAJ_P0096699 A630033H20Rik protein_coding protein_coding MGP_CBAJ_T0096700.1 MGP_CBAJ_G0035664.1 mouse_genomes_project X 110324780 110350988 + MGP_CBAJ_P0096700 A630033H20Rik protein_coding protein_coding MGP_CBAJ_T0095332.1 MGP_CBAJ_G0035274.1 mouse_genomes_project X 32567565 32572285 + MGP_CBAJ_P0095332 Zcchc12 protein_coding protein_coding MGP_CBAJ_T0095333.1 MGP_CBAJ_G0035274.1 mouse_genomes_project X 32567607 32572293 + MGP_CBAJ_P0095333 Zcchc12 protein_coding protein_coding MGP_CBAJ_T0095334.1 MGP_CBAJ_G0035274.1 mouse_genomes_project X 32567620 32572292 + MGP_CBAJ_P0095334 Zcchc12 protein_coding protein_coding MGP_CBAJ_T0095335.1 MGP_CBAJ_G0035274.1 mouse_genomes_project X 32567647 32572292 + MGP_CBAJ_P0095335 Zcchc12 protein_coding protein_coding MGP_CBAJ_T0011002.1 MGP_CBAJ_G0009140.1 mouse_genomes_project X 35381556 35381622 - Gm25642 miRNA miRNA MGP_CBAJ_T0010995.1 MGP_CBAJ_G0009133.1 mouse_genomes_project X 15041734 15041829 - Mir221 miRNA miRNA MGP_CBAJ_T0097149.1 MGP_CBAJ_G0035815.1 mouse_genomes_project X 151571527 151616039 - MGP_CBAJ_P0097149 Amot protein_coding protein_coding MGP_CBAJ_T0097150.1 MGP_CBAJ_G0035815.1 mouse_genomes_project X 151576926 151613217 - MGP_CBAJ_P0097150 Amot protein_coding protein_coding MGP_CBAJ_T0097151.1 MGP_CBAJ_G0035815.1 mouse_genomes_project X 151584806 151586971 - Amot protein_coding retained_intron MGP_CBAJ_T0097152.1 MGP_CBAJ_G0035815.1 mouse_genomes_project X 151600709 151633760 - MGP_CBAJ_P0097152 Amot protein_coding protein_coding MGP_CBAJ_T0095712.1 MGP_CBAJ_G0035408.1 mouse_genomes_project X 61045207 61053787 + MGP_CBAJ_P0095712 4933402E13Rik protein_coding protein_coding MGP_CBAJ_T0095713.1 MGP_CBAJ_G0035408.1 mouse_genomes_project X 61048850 61053787 + MGP_CBAJ_P0095713 4933402E13Rik protein_coding protein_coding MGP_CBAJ_T0096853.1 MGP_CBAJ_G0035720.1 mouse_genomes_project X 139409316 139470125 + MGP_CBAJ_P0096853 Cenpi protein_coding protein_coding MGP_CBAJ_T0096854.1 MGP_CBAJ_G0035720.1 mouse_genomes_project X 139409387 139470122 + MGP_CBAJ_P0096854 Cenpi protein_coding protein_coding MGP_CBAJ_T0096855.1 MGP_CBAJ_G0035720.1 mouse_genomes_project X 139409431 139411483 + MGP_CBAJ_P0096855 Cenpi protein_coding protein_coding MGP_CBAJ_T0096856.1 MGP_CBAJ_G0035720.1 mouse_genomes_project X 139413209 139448858 + Cenpi protein_coding processed_transcript MGP_CBAJ_T0096857.1 MGP_CBAJ_G0035720.1 mouse_genomes_project X 139450527 139470123 + Cenpi protein_coding processed_transcript MGP_CBAJ_T0016559.1 MGP_CBAJ_G0014671.1 mouse_genomes_project X 150575363 150576729 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016649.1 MGP_CBAJ_G0014761.1 mouse_genomes_project X 170856097 170856563 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099696.1 MGP_CBAJ_G0037951.1 mouse_genomes_project X 109802363 109802470 - Gm24491 snRNA snRNA MGP_CBAJ_T0096207.1 MGP_CBAJ_G0035518.1 mouse_genomes_project X 76437965 76441394 + MGP_CBAJ_P0096207 protein_coding protein_coding MGP_CBAJ_T0097014.1 MGP_CBAJ_G0035775.1 mouse_genomes_project X 145001931 145030488 + MGP_CBAJ_P0097014 Mum1l1 protein_coding protein_coding MGP_CBAJ_T0097015.1 MGP_CBAJ_G0035775.1 mouse_genomes_project X 145001931 145033846 + MGP_CBAJ_P0097015 Mum1l1 protein_coding protein_coding MGP_CBAJ_T0097016.1 MGP_CBAJ_G0035775.1 mouse_genomes_project X 145001933 145033848 + MGP_CBAJ_P0097016 Mum1l1 protein_coding protein_coding MGP_CBAJ_T0097017.1 MGP_CBAJ_G0035775.1 mouse_genomes_project X 145001997 145005175 + Mum1l1 protein_coding retained_intron MGP_CBAJ_T0097018.1 MGP_CBAJ_G0035775.1 mouse_genomes_project X 145009056 145033848 + MGP_CBAJ_P0097018 Mum1l1 protein_coding protein_coding MGP_CBAJ_T0097019.1 MGP_CBAJ_G0035775.1 mouse_genomes_project X 145009056 145033848 + MGP_CBAJ_P0097019 Mum1l1 protein_coding protein_coding MGP_CBAJ_T0097020.1 MGP_CBAJ_G0035775.1 mouse_genomes_project X 145009056 145030315 + MGP_CBAJ_P0097020 Mum1l1 protein_coding protein_coding MGP_CBAJ_T0097021.1 MGP_CBAJ_G0035775.1 mouse_genomes_project X 145009056 145030554 + MGP_CBAJ_P0097021 Mum1l1 protein_coding protein_coding MGP_CBAJ_T0096275.1 MGP_CBAJ_G0035542.1 mouse_genomes_project X 86940369 86943482 + MGP_CBAJ_P0096275 Samt3 protein_coding protein_coding MGP_CBAJ_T0095049.1 MGP_CBAJ_G0035186.1 mouse_genomes_project X 2763407 2767736 - MGP_CBAJ_P0095049 Eras protein_coding protein_coding MGP_CBAJ_T0095624.1 MGP_CBAJ_G0035380.1 mouse_genomes_project X 54564148 54569806 + MGP_CBAJ_P0095624 Smim10l2a protein_coding protein_coding MGP_CBAJ_T0011045.1 MGP_CBAJ_G0009183.1 mouse_genomes_project X 66068085 66068159 - Mir465 miRNA miRNA MGP_CBAJ_T0102273.1 MGP_CBAJ_G0040302.1 mouse_genomes_project X 141074583 141078363 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016610.1 MGP_CBAJ_G0014722.1 mouse_genomes_project X 163476035 163477632 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005485.1 MGP_CBAJ_G0004620.1 mouse_genomes_project X 2458583 2464303 - Gm14703 antisense antisense MGP_CBAJ_T0011014.1 MGP_CBAJ_G0009152.1 mouse_genomes_project X 50451974 50452054 - Mir20b miRNA miRNA MGP_CBAJ_T0016242.1 MGP_CBAJ_G0014354.1 mouse_genomes_project X 87203999 87205644 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095652.1 MGP_CBAJ_G0035389.1 mouse_genomes_project X 55125351 55240004 + MGP_CBAJ_P0095652 protein_coding protein_coding MGP_CBAJ_T0095653.1 MGP_CBAJ_G0035389.1 mouse_genomes_project X 55127634 55240036 + MGP_CBAJ_P0095653 protein_coding protein_coding MGP_CBAJ_T0095654.1 MGP_CBAJ_G0035389.1 mouse_genomes_project X 55144221 55271657 + MGP_CBAJ_P0095654 protein_coding protein_coding MGP_CBAJ_T0095655.1 MGP_CBAJ_G0035389.1 mouse_genomes_project X 55166236 55166767 + MGP_CBAJ_P0095655 protein_coding protein_coding MGP_CBAJ_T0095656.1 MGP_CBAJ_G0035389.1 mouse_genomes_project X 55221073 55240019 + MGP_CBAJ_P0095656 protein_coding protein_coding MGP_CBAJ_T0095657.1 MGP_CBAJ_G0035389.1 mouse_genomes_project X 55225708 55240026 + MGP_CBAJ_P0095657 protein_coding protein_coding MGP_CBAJ_T0095518.1 MGP_CBAJ_G0035337.1 mouse_genomes_project X 45669441 45700898 + MGP_CBAJ_P0095518 Utp14a protein_coding protein_coding MGP_CBAJ_T0095519.1 MGP_CBAJ_G0035337.1 mouse_genomes_project X 45669476 45683289 + Utp14a protein_coding processed_transcript MGP_CBAJ_T0095520.1 MGP_CBAJ_G0035337.1 mouse_genomes_project X 45669497 45688402 + Utp14a protein_coding processed_transcript MGP_CBAJ_T0016151.1 MGP_CBAJ_G0014263.1 mouse_genomes_project X 66215321 66216758 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096222.1 MGP_CBAJ_G0035529.1 mouse_genomes_project X 78590952 78592438 + MGP_CBAJ_P0096222 4930480E11Rik protein_coding protein_coding MGP_CBAJ_T0015994.1 MGP_CBAJ_G0014106.1 mouse_genomes_project X 12294070 12295245 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016260.1 MGP_CBAJ_G0014372.1 mouse_genomes_project X 90700635 90701143 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016205.1 MGP_CBAJ_G0014317.1 mouse_genomes_project X 77851595 77852195 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096852.1 MGP_CBAJ_G0035719.1 mouse_genomes_project X 139393979 139407216 + MGP_CBAJ_P0096852 Tmem35a protein_coding protein_coding MGP_CBAJ_T0096333.1 MGP_CBAJ_G0035564.1 mouse_genomes_project X 96245819 96294664 + MGP_CBAJ_P0096333 Apoo protein_coding protein_coding MGP_CBAJ_T0096334.1 MGP_CBAJ_G0035564.1 mouse_genomes_project X 96245819 96299367 + MGP_CBAJ_P0096334 Apoo protein_coding protein_coding MGP_CBAJ_T0011072.1 MGP_CBAJ_G0009210.1 mouse_genomes_project X 106981498 106981598 - Mir672 miRNA miRNA MGP_CBAJ_T0016554.1 MGP_CBAJ_G0014666.1 mouse_genomes_project X 150281690 150282513 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095521.1 MGP_CBAJ_G0035338.1 mouse_genomes_project X 45767871 45844512 + MGP_CBAJ_P0095521 Bcorl1 protein_coding protein_coding MGP_CBAJ_T0095522.1 MGP_CBAJ_G0035338.1 mouse_genomes_project X 45769512 45791841 + Bcorl1 protein_coding processed_transcript MGP_CBAJ_T0095523.1 MGP_CBAJ_G0035338.1 mouse_genomes_project X 45790954 45810274 + MGP_CBAJ_P0095523 Bcorl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0095524.1 MGP_CBAJ_G0035338.1 mouse_genomes_project X 45798682 45815099 + MGP_CBAJ_P0095524 Bcorl1 protein_coding protein_coding MGP_CBAJ_T0100956.1 MGP_CBAJ_G0039211.1 mouse_genomes_project X 126028650 126028786 + Gm23277 snoRNA snoRNA MGP_CBAJ_T0100960.1 MGP_CBAJ_G0039215.1 mouse_genomes_project X 137334877 137335001 + Gm26406 snoRNA snoRNA MGP_CBAJ_T0095487.1 MGP_CBAJ_G0035328.1 mouse_genomes_project X 41932749 41936377 - MGP_CBAJ_P0095487 Dcaf12l1 protein_coding protein_coding MGP_CBAJ_T0095488.1 MGP_CBAJ_G0035328.1 mouse_genomes_project X 41932749 41936341 - MGP_CBAJ_P0095488 Dcaf12l1 protein_coding protein_coding MGP_CBAJ_T0016130.1 MGP_CBAJ_G0014242.1 mouse_genomes_project X 60323103 60323681 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096673.1 MGP_CBAJ_G0035655.1 mouse_genomes_project X 109235131 109251244 + MGP_CBAJ_P0096673 Pgk1-rs7 protein_coding unknown_likely_coding MGP_CBAJ_T0096674.1 MGP_CBAJ_G0035655.1 mouse_genomes_project X 109239528 109242680 + Pgk1-rs7 protein_coding retained_intron MGP_CBAJ_T0095113.1 MGP_CBAJ_G0035200.1 mouse_genomes_project X 3847639 3854532 + MGP_CBAJ_P0095113 protein_coding protein_coding MGP_CBAJ_T0016660.1 MGP_CBAJ_G0014772.1 mouse_genomes_project X 174352987 174354385 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096496.1 MGP_CBAJ_G0035607.1 mouse_genomes_project X 103783321 103790866 - MGP_CBAJ_P0096496 Gm20489 protein_coding protein_coding MGP_CBAJ_T0095621.1 MGP_CBAJ_G0035377.1 mouse_genomes_project X 51623205 51625552 - MGP_CBAJ_P0095621 Zfp36l3 protein_coding protein_coding MGP_CBAJ_T0095119.1 MGP_CBAJ_G0035206.1 mouse_genomes_project X 4185436 4186114 + MGP_CBAJ_P0095119 protein_coding protein_coding MGP_CBAJ_T0016034.1 MGP_CBAJ_G0014146.1 mouse_genomes_project X 35539714 35541272 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099679.1 MGP_CBAJ_G0037934.1 mouse_genomes_project X 65956536 65956675 + Gm23000 snRNA snRNA MGP_CBAJ_T0097554.1 MGP_CBAJ_G0035905.1 mouse_genomes_project X 172779019 172780078 - MGP_CBAJ_P0097554 Gm17604 protein_coding protein_coding MGP_CBAJ_T0016637.1 MGP_CBAJ_G0014749.1 mouse_genomes_project X 168017013 168017143 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095112.1 MGP_CBAJ_G0035199.1 mouse_genomes_project X 3730887 3813892 + MGP_CBAJ_P0095112 Ssxb3 protein_coding protein_coding MGP_CBAJ_T0016550.1 MGP_CBAJ_G0014662.1 mouse_genomes_project X 148671009 148671420 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097290.1 MGP_CBAJ_G0035835.1 mouse_genomes_project X 158704617 158793754 + MGP_CBAJ_P0097290 Iqsec2 protein_coding protein_coding MGP_CBAJ_T0097291.1 MGP_CBAJ_G0035835.1 mouse_genomes_project X 158704621 158793755 + MGP_CBAJ_P0097291 Iqsec2 protein_coding protein_coding MGP_CBAJ_T0097292.1 MGP_CBAJ_G0035835.1 mouse_genomes_project X 158704822 158760654 + MGP_CBAJ_P0097292 Iqsec2 protein_coding unknown_likely_coding MGP_CBAJ_T0097293.1 MGP_CBAJ_G0035835.1 mouse_genomes_project X 158745055 158770043 + Iqsec2 protein_coding processed_transcript MGP_CBAJ_T0097294.1 MGP_CBAJ_G0035835.1 mouse_genomes_project X 158745055 158760643 + Iqsec2 protein_coding processed_transcript MGP_CBAJ_T0097295.1 MGP_CBAJ_G0035835.1 mouse_genomes_project X 158745055 158760643 + Iqsec2 protein_coding processed_transcript MGP_CBAJ_T0097296.1 MGP_CBAJ_G0035835.1 mouse_genomes_project X 158766908 158792406 + MGP_CBAJ_P0097296 Iqsec2 protein_coding protein_coding MGP_CBAJ_T0016350.1 MGP_CBAJ_G0014462.1 mouse_genomes_project X 106307251 106308029 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095391.1 MGP_CBAJ_G0035302.1 mouse_genomes_project X 34353647 34357736 - MGP_CBAJ_P0095391 Rhox8 protein_coding protein_coding MGP_CBAJ_T0095215.1 MGP_CBAJ_G0035237.1 mouse_genomes_project X 12589482 12614688 - MGP_CBAJ_P0095215 Ndp protein_coding protein_coding MGP_CBAJ_T0096206.1 MGP_CBAJ_G0035517.1 mouse_genomes_project X 76437964 76441394 + MGP_CBAJ_P0096206 protein_coding protein_coding MGP_CBAJ_T0101431.1 MGP_CBAJ_G0039469.1 mouse_genomes_project X 105938700 106014743 - unitary_pseudogene processed_transcript MGP_CBAJ_T0101432.1 MGP_CBAJ_G0039469.1 mouse_genomes_project X 105984766 106086220 - unitary_pseudogene processed_transcript MGP_CBAJ_T0101433.1 MGP_CBAJ_G0039469.1 mouse_genomes_project X 105984766 106014743 - unitary_pseudogene unitary_pseudogene MGP_CBAJ_T0101434.1 MGP_CBAJ_G0039469.1 mouse_genomes_project X 105984832 106011176 - unitary_pseudogene processed_transcript MGP_CBAJ_T0101435.1 MGP_CBAJ_G0039469.1 mouse_genomes_project X 105986120 106014735 - unitary_pseudogene retained_intron MGP_CBAJ_T0101436.1 MGP_CBAJ_G0039469.1 mouse_genomes_project X 105987660 106057081 - unitary_pseudogene processed_transcript MGP_CBAJ_T0101437.1 MGP_CBAJ_G0039469.1 mouse_genomes_project X 105987671 106046656 - unitary_pseudogene processed_transcript MGP_CBAJ_T0016241.1 MGP_CBAJ_G0014353.1 mouse_genomes_project X 86928505 86929019 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095580.1 MGP_CBAJ_G0035358.1 mouse_genomes_project X 48702131 48811382 - MGP_CBAJ_P0095580 Mbnl3 protein_coding protein_coding MGP_CBAJ_T0095581.1 MGP_CBAJ_G0035358.1 mouse_genomes_project X 48704944 48811540 - MGP_CBAJ_P0095581 Mbnl3 protein_coding protein_coding MGP_CBAJ_T0095582.1 MGP_CBAJ_G0035358.1 mouse_genomes_project X 48704944 48744086 - MGP_CBAJ_P0095582 Mbnl3 protein_coding protein_coding MGP_CBAJ_T0095583.1 MGP_CBAJ_G0035358.1 mouse_genomes_project X 48705316 48714084 - Mbnl3 protein_coding retained_intron MGP_CBAJ_T0095584.1 MGP_CBAJ_G0035358.1 mouse_genomes_project X 48705353 48762030 - MGP_CBAJ_P0095584 Mbnl3 protein_coding protein_coding MGP_CBAJ_T0095585.1 MGP_CBAJ_G0035358.1 mouse_genomes_project X 48705749 48729654 - Mbnl3 protein_coding processed_transcript MGP_CBAJ_T0095586.1 MGP_CBAJ_G0035358.1 mouse_genomes_project X 48761772 48812082 - Mbnl3 protein_coding processed_transcript MGP_CBAJ_T0096720.1 MGP_CBAJ_G0035670.1 mouse_genomes_project X 111218078 111220780 - MGP_CBAJ_P0096720 Gm732 protein_coding protein_coding MGP_CBAJ_T0096721.1 MGP_CBAJ_G0035670.1 mouse_genomes_project X 111219219 111220809 - MGP_CBAJ_P0096721 Gm732 protein_coding protein_coding MGP_CBAJ_T0101226.1 MGP_CBAJ_G0039374.1 mouse_genomes_project X 135227387 135228096 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0016296.1 MGP_CBAJ_G0014408.1 mouse_genomes_project X 96707228 96707928 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011038.1 MGP_CBAJ_G0009176.1 mouse_genomes_project X 66031816 66031894 - Mir878 miRNA miRNA MGP_CBAJ_T0096172.1 MGP_CBAJ_G0035507.1 mouse_genomes_project X 75227259 75248341 - MGP_CBAJ_P0096172 Smim9 protein_coding protein_coding MGP_CBAJ_T0096173.1 MGP_CBAJ_G0035507.1 mouse_genomes_project X 75227437 75246208 - MGP_CBAJ_P0096173 Smim9 protein_coding protein_coding MGP_CBAJ_T0096174.1 MGP_CBAJ_G0035507.1 mouse_genomes_project X 75230326 75248358 - Smim9 protein_coding processed_transcript MGP_CBAJ_T0097525.1 MGP_CBAJ_G0035898.1 mouse_genomes_project X 171947415 172075188 + MGP_CBAJ_P0097525 Pir protein_coding protein_coding MGP_CBAJ_T0097526.1 MGP_CBAJ_G0035898.1 mouse_genomes_project X 171947475 172079088 + MGP_CBAJ_P0097526 Pir protein_coding protein_coding MGP_CBAJ_T0097527.1 MGP_CBAJ_G0035898.1 mouse_genomes_project X 171947555 171949919 + Pir protein_coding retained_intron MGP_CBAJ_T0097528.1 MGP_CBAJ_G0035898.1 mouse_genomes_project X 171947591 172048542 + Pir protein_coding retained_intron MGP_CBAJ_T0097529.1 MGP_CBAJ_G0035898.1 mouse_genomes_project X 171947617 172012126 + Pir protein_coding processed_transcript MGP_CBAJ_T0016430.1 MGP_CBAJ_G0014542.1 mouse_genomes_project X 119976939 119977274 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011077.1 MGP_CBAJ_G0009215.1 mouse_genomes_project X 119894772 119894860 + Gm24683 miRNA miRNA MGP_CBAJ_T0095307.1 MGP_CBAJ_G0035263.1 mouse_genomes_project X 17191715 17197088 + MGP_CBAJ_P0095307 Ssxa1 protein_coding protein_coding MGP_CBAJ_T0095308.1 MGP_CBAJ_G0035263.1 mouse_genomes_project X 17194267 17197088 + MGP_CBAJ_P0095308 Ssxa1 protein_coding protein_coding MGP_CBAJ_T0016586.1 MGP_CBAJ_G0014698.1 mouse_genomes_project X 157650901 157651261 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0094922.1 MGP_CBAJ_G0035161.1 mouse_genomes_project X 1912895 1950436 - MGP_CBAJ_P0094922 Clcn5 protein_coding protein_coding MGP_CBAJ_T0094923.1 MGP_CBAJ_G0035161.1 mouse_genomes_project X 1918554 2090485 - MGP_CBAJ_P0094923 Clcn5 protein_coding protein_coding MGP_CBAJ_T0094924.1 MGP_CBAJ_G0035161.1 mouse_genomes_project X 1919262 1950395 - Clcn5 protein_coding retained_intron MGP_CBAJ_T0094925.1 MGP_CBAJ_G0035161.1 mouse_genomes_project X 1930284 2090610 - MGP_CBAJ_P0094925 Clcn5 protein_coding protein_coding MGP_CBAJ_T0094926.1 MGP_CBAJ_G0035161.1 mouse_genomes_project X 1976120 2090422 - Clcn5 protein_coding processed_transcript MGP_CBAJ_T0099711.1 MGP_CBAJ_G0037966.1 mouse_genomes_project X 151812925 151813023 - Gm27659 snRNA snRNA MGP_CBAJ_T0095209.1 MGP_CBAJ_G0035234.1 mouse_genomes_project X 12293855 12296532 + MGP_CBAJ_P0095209 protein_coding protein_coding MGP_CBAJ_T0096070.1 MGP_CBAJ_G0035486.1 mouse_genomes_project X 74261464 74272343 + MGP_CBAJ_P0096070 Gdi1 protein_coding protein_coding MGP_CBAJ_T0096071.1 MGP_CBAJ_G0035486.1 mouse_genomes_project X 74261478 74272341 + Gdi1 protein_coding retained_intron MGP_CBAJ_T0096072.1 MGP_CBAJ_G0035486.1 mouse_genomes_project X 74261722 74264254 + Gdi1 protein_coding processed_transcript MGP_CBAJ_T0096073.1 MGP_CBAJ_G0035486.1 mouse_genomes_project X 74261733 74272339 + Gdi1 protein_coding retained_intron MGP_CBAJ_T0096074.1 MGP_CBAJ_G0035486.1 mouse_genomes_project X 74261779 74264391 + MGP_CBAJ_P0096074 Gdi1 protein_coding protein_coding MGP_CBAJ_T0096075.1 MGP_CBAJ_G0035486.1 mouse_genomes_project X 74262294 74264432 + Gdi1 protein_coding processed_transcript MGP_CBAJ_T0096076.1 MGP_CBAJ_G0035486.1 mouse_genomes_project X 74264395 74270040 + Gdi1 protein_coding retained_intron MGP_CBAJ_T0096077.1 MGP_CBAJ_G0035486.1 mouse_genomes_project X 74266402 74271629 + MGP_CBAJ_P0096077 Gdi1 protein_coding protein_coding MGP_CBAJ_T0096078.1 MGP_CBAJ_G0035486.1 mouse_genomes_project X 74270324 74271409 + Gdi1 protein_coding processed_transcript MGP_CBAJ_T0096079.1 MGP_CBAJ_G0035486.1 mouse_genomes_project X 74270853 74271506 + Gdi1 protein_coding processed_transcript MGP_CBAJ_T0016049.1 MGP_CBAJ_G0014161.1 mouse_genomes_project X 38539738 38540122 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100928.1 MGP_CBAJ_G0039183.1 mouse_genomes_project X 34173062 34173205 - snoRNA snoRNA MGP_CBAJ_T0097520.1 MGP_CBAJ_G0035896.1 mouse_genomes_project X 171811366 171864387 + MGP_CBAJ_P0097520 Ace2 protein_coding protein_coding MGP_CBAJ_T0097521.1 MGP_CBAJ_G0035896.1 mouse_genomes_project X 171812512 171864387 + MGP_CBAJ_P0097521 Ace2 protein_coding protein_coding MGP_CBAJ_T0097522.1 MGP_CBAJ_G0035896.1 mouse_genomes_project X 171836897 171861791 + MGP_CBAJ_P0097522 Ace2 protein_coding protein_coding MGP_CBAJ_T0099693.1 MGP_CBAJ_G0037948.1 mouse_genomes_project X 108831625 108831808 + Gm26020 snRNA snRNA MGP_CBAJ_T0016077.1 MGP_CBAJ_G0014189.1 mouse_genomes_project X 46676078 46676478 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097476.1 MGP_CBAJ_G0035885.1 mouse_genomes_project X 170280071 170316378 - Txlng protein_coding retained_intron MGP_CBAJ_T0097477.1 MGP_CBAJ_G0035885.1 mouse_genomes_project X 170280071 170337014 - MGP_CBAJ_P0097477 Txlng protein_coding protein_coding MGP_CBAJ_T0097478.1 MGP_CBAJ_G0035885.1 mouse_genomes_project X 170280071 170337014 - MGP_CBAJ_P0097478 Txlng protein_coding protein_coding MGP_CBAJ_T0097479.1 MGP_CBAJ_G0035885.1 mouse_genomes_project X 170290070 170337014 - MGP_CBAJ_P0097479 Txlng protein_coding protein_coding MGP_CBAJ_T0097480.1 MGP_CBAJ_G0035885.1 mouse_genomes_project X 170291755 170336900 - MGP_CBAJ_P0097480 Txlng protein_coding protein_coding MGP_CBAJ_T0097481.1 MGP_CBAJ_G0035885.1 mouse_genomes_project X 170335619 170337014 - Txlng protein_coding processed_transcript MGP_CBAJ_T0016642.1 MGP_CBAJ_G0014754.1 mouse_genomes_project X 170168452 170168907 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096558.1 MGP_CBAJ_G0035617.1 mouse_genomes_project X 104320666 104323398 - MGP_CBAJ_P0096558 Cxcr3 protein_coding protein_coding MGP_CBAJ_T0097430.1 MGP_CBAJ_G0035874.1 mouse_genomes_project X 167676009 167752663 + Adgrg2 protein_coding retained_intron MGP_CBAJ_T0097431.1 MGP_CBAJ_G0035874.1 mouse_genomes_project X 167676009 167760677 + MGP_CBAJ_P0097431 Adgrg2 protein_coding protein_coding MGP_CBAJ_T0097432.1 MGP_CBAJ_G0035874.1 mouse_genomes_project X 167709697 167786940 + MGP_CBAJ_P0097432 Adgrg2 protein_coding protein_coding MGP_CBAJ_T0097433.1 MGP_CBAJ_G0035874.1 mouse_genomes_project X 167709697 167786940 + MGP_CBAJ_P0097433 Adgrg2 protein_coding protein_coding MGP_CBAJ_T0097434.1 MGP_CBAJ_G0035874.1 mouse_genomes_project X 167718171 167787189 + MGP_CBAJ_P0097434 Adgrg2 protein_coding protein_coding MGP_CBAJ_T0016157.1 MGP_CBAJ_G0014269.1 mouse_genomes_project X 67363492 67363795 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018410.1 MGP_CBAJ_G0015530.1 mouse_genomes_project X 141527788 141540686 + 5730412P04Rik processed_transcript processed_transcript MGP_CBAJ_T0009288.1 MGP_CBAJ_G0007448.1 mouse_genomes_project X 94924427 94930099 + lincRNA lincRNA MGP_CBAJ_T0096593.1 MGP_CBAJ_G0035627.1 mouse_genomes_project X 105428592 105433841 + MGP_CBAJ_P0096593 protein_coding protein_coding MGP_CBAJ_T0096594.1 MGP_CBAJ_G0035627.1 mouse_genomes_project X 105428592 105433841 + MGP_CBAJ_P0096594 protein_coding protein_coding MGP_CBAJ_T0096595.1 MGP_CBAJ_G0035627.1 mouse_genomes_project X 105428775 105433841 + MGP_CBAJ_P0096595 protein_coding protein_coding MGP_CBAJ_T0096596.1 MGP_CBAJ_G0035628.1 mouse_genomes_project X 105474418 105479807 + MGP_CBAJ_P0096596 1700031F05Rik protein_coding protein_coding MGP_CBAJ_T0016216.1 MGP_CBAJ_G0014328.1 mouse_genomes_project X 79039246 79040354 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016393.1 MGP_CBAJ_G0014505.1 mouse_genomes_project X 112313713 112314525 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016587.1 MGP_CBAJ_G0014699.1 mouse_genomes_project X 157660013 157660398 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0102245.1 MGP_CBAJ_G0040274.1 mouse_genomes_project X 70089513 70090353 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016413.1 MGP_CBAJ_G0014525.1 mouse_genomes_project X 116547053 116548187 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016103.1 MGP_CBAJ_G0014215.1 mouse_genomes_project X 55962555 55962801 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009314.1 MGP_CBAJ_G0007461.1 mouse_genomes_project X 118577232 118578841 + 4930555B12Rik lincRNA lincRNA MGP_CBAJ_T0096627.1 MGP_CBAJ_G0035646.1 mouse_genomes_project X 108059895 108065326 + MGP_CBAJ_P0096627 Pbdc1 protein_coding protein_coding MGP_CBAJ_T0096628.1 MGP_CBAJ_G0035646.1 mouse_genomes_project X 108059900 108099733 + MGP_CBAJ_P0096628 Pbdc1 protein_coding protein_coding MGP_CBAJ_T0096629.1 MGP_CBAJ_G0035646.1 mouse_genomes_project X 108059914 108063300 + Pbdc1 protein_coding retained_intron MGP_CBAJ_T0095190.1 MGP_CBAJ_G0035229.1 mouse_genomes_project X 9024490 9324875 - MGP_CBAJ_P0095190 Cask protein_coding unknown_likely_coding MGP_CBAJ_T0095191.1 MGP_CBAJ_G0035229.1 mouse_genomes_project X 9024494 9379750 - MGP_CBAJ_P0095191 Cask protein_coding protein_coding MGP_CBAJ_T0095192.1 MGP_CBAJ_G0035229.1 mouse_genomes_project X 9024494 9314758 - MGP_CBAJ_P0095192 Cask protein_coding protein_coding MGP_CBAJ_T0095193.1 MGP_CBAJ_G0035229.1 mouse_genomes_project X 9024494 9379713 - MGP_CBAJ_P0095193 Cask protein_coding protein_coding MGP_CBAJ_T0095194.1 MGP_CBAJ_G0035229.1 mouse_genomes_project X 9028793 9379728 - MGP_CBAJ_P0095194 Cask protein_coding protein_coding MGP_CBAJ_T0095195.1 MGP_CBAJ_G0035229.1 mouse_genomes_project X 9029244 9034231 - MGP_CBAJ_P0095195 Cask protein_coding protein_coding MGP_CBAJ_T0095196.1 MGP_CBAJ_G0035229.1 mouse_genomes_project X 9029542 9045130 - MGP_CBAJ_P0095196 Cask protein_coding protein_coding MGP_CBAJ_T0095197.1 MGP_CBAJ_G0035229.1 mouse_genomes_project X 9040800 9067321 - MGP_CBAJ_P0095197 Cask protein_coding protein_coding MGP_CBAJ_T0095198.1 MGP_CBAJ_G0035229.1 mouse_genomes_project X 9062486 9379750 - Cask protein_coding retained_intron MGP_CBAJ_T0095199.1 MGP_CBAJ_G0035229.1 mouse_genomes_project X 9079555 9191241 - MGP_CBAJ_P0095199 Cask protein_coding protein_coding MGP_CBAJ_T0095200.1 MGP_CBAJ_G0035229.1 mouse_genomes_project X 9141078 9379260 - MGP_CBAJ_P0095200 Cask protein_coding protein_coding MGP_CBAJ_T0095204.1 MGP_CBAJ_G0035229.1 mouse_genomes_project X 9233183 9384539 - Cask protein_coding processed_transcript MGP_CBAJ_T0095205.1 MGP_CBAJ_G0035229.1 mouse_genomes_project X 9379261 9379907 - Cask protein_coding processed_transcript MGP_CBAJ_T0101231.1 MGP_CBAJ_G0039379.1 mouse_genomes_project X 159119129 159121329 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101232.1 MGP_CBAJ_G0039379.1 mouse_genomes_project X 159119902 159121044 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0011039.1 MGP_CBAJ_G0009177.1 mouse_genomes_project X 66032252 66032330 - Mir881 miRNA miRNA MGP_CBAJ_T0095759.1 MGP_CBAJ_G0035428.1 mouse_genomes_project X 70630195 70737023 + MGP_CBAJ_P0095759 Mamld1 protein_coding protein_coding MGP_CBAJ_T0095760.1 MGP_CBAJ_G0035428.1 mouse_genomes_project X 70630195 70738362 + MGP_CBAJ_P0095760 Mamld1 protein_coding protein_coding MGP_CBAJ_T0099655.1 MGP_CBAJ_G0037910.1 mouse_genomes_project X 13071039 13071143 + Gm22294 snRNA snRNA MGP_CBAJ_T0096883.1 MGP_CBAJ_G0035728.1 mouse_genomes_project X 139843126 139853363 + MGP_CBAJ_P0096883 Armcx4 protein_coding protein_coding MGP_CBAJ_T0002439.1 MGP_CBAJ_G0002351.1 mouse_genomes_project X 73232857 73234113 + TEC TEC MGP_CBAJ_T0096142.1 MGP_CBAJ_G0035500.1 mouse_genomes_project X 74851819 74884262 - MGP_CBAJ_P0096142 protein_coding protein_coding MGP_CBAJ_T0015958.1 MGP_CBAJ_G0014070.1 mouse_genomes_project X 4004398 4005230 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016052.1 MGP_CBAJ_G0014164.1 mouse_genomes_project X 38772694 38773267 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016304.1 MGP_CBAJ_G0014416.1 mouse_genomes_project X 98430869 98433649 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016403.1 MGP_CBAJ_G0014515.1 mouse_genomes_project X 115772272 115772544 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009313.1 MGP_CBAJ_G0007460.1 mouse_genomes_project X 116485725 116521782 - Gm14936 lincRNA lincRNA MGP_CBAJ_T0095899.1 MGP_CBAJ_G0035469.1 mouse_genomes_project X 73758946 73775083 - MGP_CBAJ_P0095899 L1cam protein_coding protein_coding MGP_CBAJ_T0095900.1 MGP_CBAJ_G0035469.1 mouse_genomes_project X 73759123 73785765 - MGP_CBAJ_P0095900 L1cam protein_coding protein_coding MGP_CBAJ_T0095901.1 MGP_CBAJ_G0035469.1 mouse_genomes_project X 73759840 73774982 - MGP_CBAJ_P0095901 L1cam protein_coding protein_coding MGP_CBAJ_T0095902.1 MGP_CBAJ_G0035469.1 mouse_genomes_project X 73760067 73761563 - L1cam protein_coding retained_intron MGP_CBAJ_T0095903.1 MGP_CBAJ_G0035469.1 mouse_genomes_project X 73760173 73761931 - MGP_CBAJ_P0095903 L1cam protein_coding protein_coding MGP_CBAJ_T0095904.1 MGP_CBAJ_G0035469.1 mouse_genomes_project X 73761593 73762833 - L1cam protein_coding retained_intron MGP_CBAJ_T0095905.1 MGP_CBAJ_G0035469.1 mouse_genomes_project X 73761847 73762583 - L1cam protein_coding retained_intron MGP_CBAJ_T0095906.1 MGP_CBAJ_G0035469.1 mouse_genomes_project X 73762650 73763802 - L1cam protein_coding retained_intron MGP_CBAJ_T0095907.1 MGP_CBAJ_G0035469.1 mouse_genomes_project X 73764241 73765324 - L1cam protein_coding retained_intron MGP_CBAJ_T0095908.1 MGP_CBAJ_G0035469.1 mouse_genomes_project X 73764594 73766292 - MGP_CBAJ_P0095908 L1cam protein_coding protein_coding MGP_CBAJ_T0095909.1 MGP_CBAJ_G0035469.1 mouse_genomes_project X 73768881 73785726 - L1cam protein_coding retained_intron MGP_CBAJ_T0095910.1 MGP_CBAJ_G0035469.1 mouse_genomes_project X 73770864 73815002 - L1cam protein_coding processed_transcript MGP_CBAJ_T0095911.1 MGP_CBAJ_G0035469.1 mouse_genomes_project X 73770941 73775457 - MGP_CBAJ_P0095911 L1cam protein_coding protein_coding MGP_CBAJ_T0005518.1 MGP_CBAJ_G0004645.1 mouse_genomes_project X 101849018 101850747 + Gm14808 antisense antisense MGP_CBAJ_T0095427.1 MGP_CBAJ_G0035316.1 mouse_genomes_project X 35406335 35607165 + MGP_CBAJ_P0095427 6030498E09Rik protein_coding protein_coding MGP_CBAJ_T0095428.1 MGP_CBAJ_G0035316.1 mouse_genomes_project X 35600599 35602146 + MGP_CBAJ_P0095428 6030498E09Rik protein_coding protein_coding MGP_CBAJ_T0102270.1 MGP_CBAJ_G0040299.1 mouse_genomes_project X 109423006 109426852 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0098141.1 MGP_CBAJ_G0036414.1 mouse_genomes_project X 141714631 141714750 + n-R5s12 rRNA rRNA MGP_CBAJ_T0097092.1 MGP_CBAJ_G0035800.1 mouse_genomes_project X 148081425 148199958 - MGP_CBAJ_P0097092 Gucy2f protein_coding protein_coding MGP_CBAJ_T0016634.1 MGP_CBAJ_G0014746.1 mouse_genomes_project X 167579937 167580419 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097147.1 MGP_CBAJ_G0035814.1 mouse_genomes_project X 151389180 151458796 - MGP_CBAJ_P0097147 Lhfpl1 protein_coding protein_coding MGP_CBAJ_T0097148.1 MGP_CBAJ_G0035814.1 mouse_genomes_project X 151450858 151458935 - MGP_CBAJ_P0097148 Lhfpl1 protein_coding protein_coding MGP_CBAJ_T0016307.1 MGP_CBAJ_G0014419.1 mouse_genomes_project X 99116759 99119124 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016450.1 MGP_CBAJ_G0014562.1 mouse_genomes_project X 124539198 124539654 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016247.1 MGP_CBAJ_G0014359.1 mouse_genomes_project X 89208190 89208726 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016051.1 MGP_CBAJ_G0014163.1 mouse_genomes_project X 38765856 38766522 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005512.1 MGP_CBAJ_G0004640.1 mouse_genomes_project X 76406997 76407577 - Gm14707 antisense antisense MGP_CBAJ_T0095130.1 MGP_CBAJ_G0035213.1 mouse_genomes_project X 4832406 4841392 - MGP_CBAJ_P0095130 Dynlt3 protein_coding protein_coding MGP_CBAJ_T0095131.1 MGP_CBAJ_G0035213.1 mouse_genomes_project X 4834316 4838012 - Dynlt3 protein_coding processed_transcript MGP_CBAJ_T0095132.1 MGP_CBAJ_G0035213.1 mouse_genomes_project X 4834598 4841392 - Dynlt3 protein_coding processed_transcript MGP_CBAJ_T0095133.1 MGP_CBAJ_G0035213.1 mouse_genomes_project X 4834660 4835680 - Dynlt3 protein_coding processed_transcript MGP_CBAJ_T0011017.1 MGP_CBAJ_G0009155.1 mouse_genomes_project X 50804368 50804450 - Mir450b miRNA miRNA MGP_CBAJ_T0095761.1 MGP_CBAJ_G0035429.1 mouse_genomes_project X 70793612 70919330 + MGP_CBAJ_P0095761 Mtm1 protein_coding protein_coding MGP_CBAJ_T0095762.1 MGP_CBAJ_G0035429.1 mouse_genomes_project X 70800679 70919330 + MGP_CBAJ_P0095762 Mtm1 protein_coding protein_coding MGP_CBAJ_T0095763.1 MGP_CBAJ_G0035429.1 mouse_genomes_project X 70800679 70919330 + MGP_CBAJ_P0095763 Mtm1 protein_coding protein_coding MGP_CBAJ_T0095764.1 MGP_CBAJ_G0035429.1 mouse_genomes_project X 70800679 70849847 + MGP_CBAJ_P0095764 Mtm1 protein_coding protein_coding MGP_CBAJ_T0095765.1 MGP_CBAJ_G0035429.1 mouse_genomes_project X 70800701 70919323 + MGP_CBAJ_P0095765 Mtm1 protein_coding protein_coding MGP_CBAJ_T0095766.1 MGP_CBAJ_G0035429.1 mouse_genomes_project X 70800704 70900953 + Mtm1 protein_coding retained_intron MGP_CBAJ_T0095767.1 MGP_CBAJ_G0035429.1 mouse_genomes_project X 70800709 70899674 + Mtm1 protein_coding retained_intron MGP_CBAJ_T0095768.1 MGP_CBAJ_G0035429.1 mouse_genomes_project X 70800712 70919300 + MGP_CBAJ_P0095768 Mtm1 protein_coding protein_coding MGP_CBAJ_T0095769.1 MGP_CBAJ_G0035429.1 mouse_genomes_project X 70800732 70914348 + Mtm1 protein_coding retained_intron MGP_CBAJ_T0095770.1 MGP_CBAJ_G0035429.1 mouse_genomes_project X 70800755 70919300 + MGP_CBAJ_P0095770 Mtm1 protein_coding protein_coding MGP_CBAJ_T0095771.1 MGP_CBAJ_G0035429.1 mouse_genomes_project X 70800758 70822329 + Mtm1 protein_coding retained_intron MGP_CBAJ_T0095772.1 MGP_CBAJ_G0035429.1 mouse_genomes_project X 70800758 70844335 + Mtm1 protein_coding retained_intron MGP_CBAJ_T0095773.1 MGP_CBAJ_G0035429.1 mouse_genomes_project X 70903460 70919726 + Mtm1 protein_coding retained_intron MGP_CBAJ_T0016391.1 MGP_CBAJ_G0014503.1 mouse_genomes_project X 111711609 111714900 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099724.1 MGP_CBAJ_G0037979.1 mouse_genomes_project X 171946115 171946221 - Gm25367 snRNA snRNA MGP_CBAJ_T0096288.1 MGP_CBAJ_G0035552.1 mouse_genomes_project X 93354186 93357661 - MGP_CBAJ_P0096288 Gm14781 protein_coding protein_coding MGP_CBAJ_T0016024.1 MGP_CBAJ_G0014136.1 mouse_genomes_project X 32121214 32122447 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096147.1 MGP_CBAJ_G0035504.1 mouse_genomes_project X 75034569 75154125 - MGP_CBAJ_P0096147 Gab3 protein_coding protein_coding MGP_CBAJ_T0096148.1 MGP_CBAJ_G0035504.1 mouse_genomes_project X 75034571 75156467 - Gab3 protein_coding processed_transcript MGP_CBAJ_T0096149.1 MGP_CBAJ_G0035504.1 mouse_genomes_project X 75034585 75154107 - MGP_CBAJ_P0096149 Gab3 protein_coding protein_coding MGP_CBAJ_T0095409.1 MGP_CBAJ_G0035311.1 mouse_genomes_project X 34883695 34904259 + MGP_CBAJ_P0095409 Atp1b4 protein_coding protein_coding MGP_CBAJ_T0095410.1 MGP_CBAJ_G0035311.1 mouse_genomes_project X 34883695 34904259 + MGP_CBAJ_P0095410 Atp1b4 protein_coding protein_coding MGP_CBAJ_T0016123.1 MGP_CBAJ_G0014235.1 mouse_genomes_project X 59422179 59422754 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0018376.1 MGP_CBAJ_G0015521.1 mouse_genomes_project X 103210681 103214360 - Gm14866 processed_transcript processed_transcript MGP_CBAJ_T0016529.1 MGP_CBAJ_G0014641.1 mouse_genomes_project X 146819703 146820289 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016316.1 MGP_CBAJ_G0014428.1 mouse_genomes_project X 101442083 101443085 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095171.1 MGP_CBAJ_G0035225.1 mouse_genomes_project X 8085388 8174994 - MGP_CBAJ_P0095171 Med14 protein_coding protein_coding MGP_CBAJ_T0095172.1 MGP_CBAJ_G0035225.1 mouse_genomes_project X 8089054 8126987 - MGP_CBAJ_P0095172 Med14 protein_coding protein_coding MGP_CBAJ_T0095173.1 MGP_CBAJ_G0035225.1 mouse_genomes_project X 8089768 8174994 - Med14 protein_coding retained_intron MGP_CBAJ_T0095174.1 MGP_CBAJ_G0035225.1 mouse_genomes_project X 8090255 8174620 - MGP_CBAJ_P0095174 Med14 protein_coding unknown_likely_coding MGP_CBAJ_T0095175.1 MGP_CBAJ_G0035225.1 mouse_genomes_project X 8117249 8124804 - Med14 protein_coding retained_intron MGP_CBAJ_T0095176.1 MGP_CBAJ_G0035225.1 mouse_genomes_project X 8120005 8174994 - MGP_CBAJ_P0095176 Med14 protein_coding protein_coding MGP_CBAJ_T0096737.1 MGP_CBAJ_G0035679.1 mouse_genomes_project X 114656950 114657304 + MGP_CBAJ_P0096737 Gm10112 protein_coding protein_coding MGP_CBAJ_T0011000.1 MGP_CBAJ_G0009138.1 mouse_genomes_project X 32780210 32780347 - Gm44485 miRNA miRNA MGP_CBAJ_T0097088.1 MGP_CBAJ_G0035797.1 mouse_genomes_project X 147671633 147685897 - MGP_CBAJ_P0097088 Irs4 protein_coding protein_coding MGP_CBAJ_T0095340.1 MGP_CBAJ_G0035277.1 mouse_genomes_project X 32825686 32832730 - Gm14569 protein_coding processed_transcript MGP_CBAJ_T0095341.1 MGP_CBAJ_G0035277.1 mouse_genomes_project X 32825686 32828766 - Gm14569 protein_coding processed_transcript MGP_CBAJ_T0095342.1 MGP_CBAJ_G0035277.1 mouse_genomes_project X 32825686 32888250 - MGP_CBAJ_P0095342 Gm14569 protein_coding protein_coding MGP_CBAJ_T0095343.1 MGP_CBAJ_G0035277.1 mouse_genomes_project X 32841893 32870648 - Gm14569 protein_coding processed_transcript MGP_CBAJ_T0096302.1 MGP_CBAJ_G0035558.1 mouse_genomes_project X 95576132 95648093 - MGP_CBAJ_P0096302 Pdk3 protein_coding protein_coding MGP_CBAJ_T0096303.1 MGP_CBAJ_G0035558.1 mouse_genomes_project X 95576621 95580650 - Pdk3 protein_coding processed_transcript MGP_CBAJ_T0096304.1 MGP_CBAJ_G0035558.1 mouse_genomes_project X 95595734 95603190 - Pdk3 protein_coding processed_transcript MGP_CBAJ_T0016333.1 MGP_CBAJ_G0014445.1 mouse_genomes_project X 104883458 104883815 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016409.1 MGP_CBAJ_G0014521.1 mouse_genomes_project X 116285295 116286276 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097076.1 MGP_CBAJ_G0035792.1 mouse_genomes_project X 146919245 146953477 + MGP_CBAJ_P0097076 Vsig1 protein_coding protein_coding MGP_CBAJ_T0097077.1 MGP_CBAJ_G0035792.1 mouse_genomes_project X 146934825 146952238 + Vsig1 protein_coding processed_transcript MGP_CBAJ_T0016593.1 MGP_CBAJ_G0014705.1 mouse_genomes_project X 159192715 159193241 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009271.1 MGP_CBAJ_G0007435.1 mouse_genomes_project X 43761313 44079035 - lincRNA lincRNA MGP_CBAJ_T0011639.1 MGP_CBAJ_G0009777.1 mouse_genomes_project X 106292703 106292826 + Gm27875 misc_RNA misc_RNA MGP_CBAJ_T0009283.1 MGP_CBAJ_G0007444.1 mouse_genomes_project X 76015722 76041646 - lincRNA lincRNA MGP_CBAJ_T0096060.1 MGP_CBAJ_G0035485.1 mouse_genomes_project X 74252977 74261188 + MGP_CBAJ_P0096060 Atp6ap1 protein_coding protein_coding MGP_CBAJ_T0096061.1 MGP_CBAJ_G0035485.1 mouse_genomes_project X 74253023 74258841 + MGP_CBAJ_P0096061 Atp6ap1 protein_coding protein_coding MGP_CBAJ_T0096062.1 MGP_CBAJ_G0035485.1 mouse_genomes_project X 74253042 74259897 + MGP_CBAJ_P0096062 Atp6ap1 protein_coding protein_coding MGP_CBAJ_T0096063.1 MGP_CBAJ_G0035485.1 mouse_genomes_project X 74253043 74261156 + MGP_CBAJ_P0096063 Atp6ap1 protein_coding protein_coding MGP_CBAJ_T0096064.1 MGP_CBAJ_G0035485.1 mouse_genomes_project X 74253057 74257825 + Atp6ap1 protein_coding retained_intron MGP_CBAJ_T0096065.1 MGP_CBAJ_G0035485.1 mouse_genomes_project X 74253113 74259930 + MGP_CBAJ_P0096065 Atp6ap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0096066.1 MGP_CBAJ_G0035485.1 mouse_genomes_project X 74253142 74258981 + MGP_CBAJ_P0096066 Atp6ap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0096067.1 MGP_CBAJ_G0035485.1 mouse_genomes_project X 74258390 74259700 + Atp6ap1 protein_coding processed_transcript MGP_CBAJ_T0096068.1 MGP_CBAJ_G0035485.1 mouse_genomes_project X 74259019 74260480 + Atp6ap1 protein_coding retained_intron MGP_CBAJ_T0096069.1 MGP_CBAJ_G0035485.1 mouse_genomes_project X 74259955 74260482 + MGP_CBAJ_P0096069 Atp6ap1 protein_coding protein_coding MGP_CBAJ_T0098143.1 MGP_CBAJ_G0036416.1 mouse_genomes_project X 158532422 158532529 + n-R5s14 rRNA rRNA MGP_CBAJ_T0095378.1 MGP_CBAJ_G0035290.1 mouse_genomes_project X 33605535 33623666 - MGP_CBAJ_P0095378 Akap14 protein_coding protein_coding MGP_CBAJ_T0096217.1 MGP_CBAJ_G0035524.1 mouse_genomes_project X 78075088 78082215 + MGP_CBAJ_P0096217 5430402E10Rik protein_coding protein_coding MGP_CBAJ_T0096622.1 MGP_CBAJ_G0035642.1 mouse_genomes_project X 107145834 107292230 - MGP_CBAJ_P0096622 Abcb7 protein_coding protein_coding MGP_CBAJ_T0096623.1 MGP_CBAJ_G0035642.1 mouse_genomes_project X 107213634 107292240 - Abcb7 protein_coding retained_intron MGP_CBAJ_T0016250.1 MGP_CBAJ_G0014362.1 mouse_genomes_project X 89841077 89841548 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016341.1 MGP_CBAJ_G0014453.1 mouse_genomes_project X 105854441 105854689 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097331.1 MGP_CBAJ_G0035849.1 mouse_genomes_project X 160405389 160416631 - MGP_CBAJ_P0097331 Kctd12b protein_coding protein_coding MGP_CBAJ_T0097332.1 MGP_CBAJ_G0035849.1 mouse_genomes_project X 160405389 160416500 - MGP_CBAJ_P0097332 Kctd12b protein_coding protein_coding MGP_CBAJ_T0097241.1 MGP_CBAJ_G0035829.1 mouse_genomes_project X 157853520 157990469 + Fam120c protein_coding retained_intron MGP_CBAJ_T0097242.1 MGP_CBAJ_G0035829.1 mouse_genomes_project X 157853520 157990469 + MGP_CBAJ_P0097242 Fam120c protein_coding protein_coding MGP_CBAJ_T0095028.1 MGP_CBAJ_G0035179.1 mouse_genomes_project X 2707407 2709467 + Pim2 protein_coding retained_intron MGP_CBAJ_T0095029.1 MGP_CBAJ_G0035179.1 mouse_genomes_project X 2707447 2712577 + MGP_CBAJ_P0095029 Pim2 protein_coding protein_coding MGP_CBAJ_T0095030.1 MGP_CBAJ_G0035179.1 mouse_genomes_project X 2707451 2712573 + MGP_CBAJ_P0095030 Pim2 protein_coding protein_coding MGP_CBAJ_T0095031.1 MGP_CBAJ_G0035179.1 mouse_genomes_project X 2707763 2710547 + Pim2 protein_coding processed_transcript MGP_CBAJ_T0016199.1 MGP_CBAJ_G0014311.1 mouse_genomes_project X 76785771 76786486 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0018409.1 MGP_CBAJ_G0015529.1 mouse_genomes_project X 140335259 140416088 - processed_transcript processed_transcript MGP_CBAJ_T0100946.1 MGP_CBAJ_G0039201.1 mouse_genomes_project X 94938146 94938229 + Gm24123 snoRNA snoRNA MGP_CBAJ_T0095323.1 MGP_CBAJ_G0035270.1 mouse_genomes_project X 20117804 20146083 + MGP_CBAJ_P0095323 Gm4907 protein_coding protein_coding MGP_CBAJ_T0095324.1 MGP_CBAJ_G0035270.1 mouse_genomes_project X 20131246 20145973 + MGP_CBAJ_P0095324 Gm4907 protein_coding protein_coding MGP_CBAJ_T0016577.1 MGP_CBAJ_G0014689.1 mouse_genomes_project X 152900879 152901815 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097574.1 MGP_CBAJ_G0035909.1 mouse_genomes_project X 174256282 174310695 - MGP_CBAJ_P0097574 Ofd1 protein_coding protein_coding MGP_CBAJ_T0097575.1 MGP_CBAJ_G0035909.1 mouse_genomes_project X 174257176 174310304 - MGP_CBAJ_P0097575 Ofd1 protein_coding unknown_likely_coding MGP_CBAJ_T0101230.1 MGP_CBAJ_G0039378.1 mouse_genomes_project X 159030589 159031731 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0018375.1 MGP_CBAJ_G0015520.1 mouse_genomes_project X 73681275 73683655 + Gm14817 processed_transcript processed_transcript MGP_CBAJ_T0015955.1 MGP_CBAJ_G0014067.1 mouse_genomes_project X 3954788 3956285 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099704.1 MGP_CBAJ_G0037959.1 mouse_genomes_project X 132385158 132385265 - Gm25061 snRNA snRNA MGP_CBAJ_T0016106.1 MGP_CBAJ_G0014218.1 mouse_genomes_project X 56072600 56073591 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016219.1 MGP_CBAJ_G0014331.1 mouse_genomes_project X 80249115 80249958 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005493.1 MGP_CBAJ_G0004623.1 mouse_genomes_project X 5979633 5980871 - Gm14493 antisense antisense MGP_CBAJ_T0011640.1 MGP_CBAJ_G0009778.1 mouse_genomes_project X 106407500 106407571 + Gm27798 misc_RNA misc_RNA MGP_CBAJ_T0016410.1 MGP_CBAJ_G0014522.1 mouse_genomes_project X 116314136 116314611 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016561.1 MGP_CBAJ_G0014673.1 mouse_genomes_project X 150633509 150634636 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016297.1 MGP_CBAJ_G0014409.1 mouse_genomes_project X 96721949 96722579 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095702.1 MGP_CBAJ_G0035403.1 mouse_genomes_project X 58768953 58961076 - MGP_CBAJ_P0095702 Atp11c protein_coding unknown_likely_coding MGP_CBAJ_T0095703.1 MGP_CBAJ_G0035403.1 mouse_genomes_project X 58768962 59180890 - MGP_CBAJ_P0095703 Atp11c protein_coding protein_coding MGP_CBAJ_T0095704.1 MGP_CBAJ_G0035403.1 mouse_genomes_project X 58768965 58961226 - MGP_CBAJ_P0095704 Atp11c protein_coding protein_coding MGP_CBAJ_T0095705.1 MGP_CBAJ_G0035403.1 mouse_genomes_project X 58768965 58961226 - MGP_CBAJ_P0095705 Atp11c protein_coding protein_coding MGP_CBAJ_T0095706.1 MGP_CBAJ_G0035403.1 mouse_genomes_project X 58771295 58818434 - Atp11c protein_coding processed_transcript MGP_CBAJ_T0095707.1 MGP_CBAJ_G0035403.1 mouse_genomes_project X 58784070 59180890 - Atp11c protein_coding processed_transcript MGP_CBAJ_T0016663.1 MGP_CBAJ_G0014775.1 mouse_genomes_project X 174356980 174357195 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100933.1 MGP_CBAJ_G0039188.1 mouse_genomes_project X 67907886 67908012 + Gm22332 snoRNA snoRNA MGP_CBAJ_T0096290.1 MGP_CBAJ_G0035554.1 mouse_genomes_project X 93775392 94316812 - MGP_CBAJ_P0096290 Mageb18 protein_coding protein_coding MGP_CBAJ_T0096291.1 MGP_CBAJ_G0035554.1 mouse_genomes_project X 93775714 93777285 - MGP_CBAJ_P0096291 Mageb18 protein_coding protein_coding MGP_CBAJ_T0098133.1 MGP_CBAJ_G0036406.1 mouse_genomes_project X 47387073 47387161 + n-R5s6 rRNA rRNA MGP_CBAJ_T0096261.1 MGP_CBAJ_G0035538.1 mouse_genomes_project X 86091838 86116909 + MGP_CBAJ_P0096261 Fthl17a protein_coding protein_coding MGP_CBAJ_T0095616.1 MGP_CBAJ_G0035372.1 mouse_genomes_project X 51465378 51466488 - MGP_CBAJ_P0095616 protein_coding protein_coding MGP_CBAJ_T0011085.1 MGP_CBAJ_G0009223.1 mouse_genomes_project X 148790444 148790542 + Mir652 miRNA miRNA MGP_CBAJ_T0102267.1 MGP_CBAJ_G0040296.1 mouse_genomes_project X 105429710 105431122 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0095370.1 MGP_CBAJ_G0035287.1 mouse_genomes_project X 33524214 33527097 - MGP_CBAJ_P0095370 Rpl39 protein_coding protein_coding MGP_CBAJ_T0095371.1 MGP_CBAJ_G0035287.1 mouse_genomes_project X 33525337 33526861 - Rpl39 protein_coding retained_intron MGP_CBAJ_T0095372.1 MGP_CBAJ_G0035287.1 mouse_genomes_project X 33526231 33526851 - Rpl39 protein_coding retained_intron MGP_CBAJ_T0002442.1 MGP_CBAJ_G0002354.1 mouse_genomes_project X 132907407 132909271 + TEC TEC MGP_CBAJ_T0101211.1 MGP_CBAJ_G0039365.1 mouse_genomes_project X 19577674 19578232 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0016171.1 MGP_CBAJ_G0014283.1 mouse_genomes_project X 70112967 70113460 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095998.1 MGP_CBAJ_G0035478.1 mouse_genomes_project X 74094036 74109009 - MGP_CBAJ_P0095998 Tex28 protein_coding protein_coding MGP_CBAJ_T0095999.1 MGP_CBAJ_G0035478.1 mouse_genomes_project X 74094036 74109009 - MGP_CBAJ_P0095999 Tex28 protein_coding protein_coding MGP_CBAJ_T0016066.1 MGP_CBAJ_G0014178.1 mouse_genomes_project X 42757690 42760140 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095625.1 MGP_CBAJ_G0035381.1 mouse_genomes_project X 54659249 54662749 + MGP_CBAJ_P0095625 Gm2174 protein_coding protein_coding MGP_CBAJ_T0005483.1 MGP_CBAJ_G0004619.1 mouse_genomes_project X 2374433 2381866 + Ppp1r3fos antisense antisense MGP_CBAJ_T0005484.1 MGP_CBAJ_G0004619.1 mouse_genomes_project X 2375325 2379267 + Ppp1r3fos antisense antisense MGP_CBAJ_T0016570.1 MGP_CBAJ_G0014682.1 mouse_genomes_project X 152155482 152156317 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0018406.1 MGP_CBAJ_G0015528.1 mouse_genomes_project X 140227347 140240744 - 3632454L22Rik processed_transcript processed_transcript MGP_CBAJ_T0018407.1 MGP_CBAJ_G0015528.1 mouse_genomes_project X 140228146 140254117 - 3632454L22Rik processed_transcript processed_transcript MGP_CBAJ_T0018408.1 MGP_CBAJ_G0015528.1 mouse_genomes_project X 140232522 140241198 - 3632454L22Rik processed_transcript processed_transcript MGP_CBAJ_T0011026.1 MGP_CBAJ_G0009164.1 mouse_genomes_project X 58189338 58189438 - Gm44500 miRNA miRNA MGP_CBAJ_T0102264.1 MGP_CBAJ_G0040293.1 mouse_genomes_project X 97688685 97689220 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015947.1 MGP_CBAJ_G0014059.1 mouse_genomes_project X 2576680 2577386 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097342.1 MGP_CBAJ_G0035854.1 mouse_genomes_project X 161736988 161740172 - MGP_CBAJ_P0097342 protein_coding protein_coding MGP_CBAJ_T0009280.1 MGP_CBAJ_G0007441.1 mouse_genomes_project X 66762939 66769970 + lincRNA lincRNA MGP_CBAJ_T0011022.1 MGP_CBAJ_G0009160.1 mouse_genomes_project X 50810348 50810419 - Mir503 miRNA miRNA MGP_CBAJ_T0005532.1 MGP_CBAJ_G0004654.1 mouse_genomes_project X 167821517 167829008 - Gm15243 antisense antisense MGP_CBAJ_T0096977.1 MGP_CBAJ_G0035763.1 mouse_genomes_project X 142531912 142564171 - MGP_CBAJ_P0096977 protein_coding protein_coding MGP_CBAJ_T0016511.1 MGP_CBAJ_G0014623.1 mouse_genomes_project X 142736618 142738329 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098129.1 MGP_CBAJ_G0036402.1 mouse_genomes_project X 5757993 5758102 + Gm25885 rRNA rRNA MGP_CBAJ_T0094962.1 MGP_CBAJ_G0035169.1 mouse_genomes_project X 2474943 2485419 - Plp2 protein_coding retained_intron MGP_CBAJ_T0094963.1 MGP_CBAJ_G0035169.1 mouse_genomes_project X 2474943 2485437 - MGP_CBAJ_P0094963 Plp2 protein_coding protein_coding MGP_CBAJ_T0094964.1 MGP_CBAJ_G0035169.1 mouse_genomes_project X 2483376 2485360 - Plp2 protein_coding retained_intron MGP_CBAJ_T0016381.1 MGP_CBAJ_G0014493.1 mouse_genomes_project X 109793590 109794944 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016543.1 MGP_CBAJ_G0014655.1 mouse_genomes_project X 148057698 148058058 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096305.1 MGP_CBAJ_G0035559.1 mouse_genomes_project X 95794816 95801605 + MGP_CBAJ_P0096305 AU015836 protein_coding protein_coding MGP_CBAJ_T0096306.1 MGP_CBAJ_G0035559.1 mouse_genomes_project X 95794831 95801605 + MGP_CBAJ_P0096306 AU015836 protein_coding nonsense_mediated_decay MGP_CBAJ_T0096307.1 MGP_CBAJ_G0035559.1 mouse_genomes_project X 95794839 95795816 + MGP_CBAJ_P0096307 AU015836 protein_coding protein_coding MGP_CBAJ_T0096308.1 MGP_CBAJ_G0035559.1 mouse_genomes_project X 95795799 95797820 + AU015836 protein_coding processed_transcript MGP_CBAJ_T0096309.1 MGP_CBAJ_G0035559.1 mouse_genomes_project X 95795953 95801206 + MGP_CBAJ_P0096309 AU015836 protein_coding protein_coding MGP_CBAJ_T0096947.1 MGP_CBAJ_G0035749.1 mouse_genomes_project X 141601082 141606230 - MGP_CBAJ_P0096947 Tceal8 protein_coding protein_coding MGP_CBAJ_T0096948.1 MGP_CBAJ_G0035749.1 mouse_genomes_project X 141602179 141606321 - MGP_CBAJ_P0096948 Tceal8 protein_coding protein_coding MGP_CBAJ_T0096949.1 MGP_CBAJ_G0035749.1 mouse_genomes_project X 141602983 141606195 - MGP_CBAJ_P0096949 Tceal8 protein_coding protein_coding MGP_CBAJ_T0096950.1 MGP_CBAJ_G0035749.1 mouse_genomes_project X 141603087 141606180 - MGP_CBAJ_P0096950 Tceal8 protein_coding protein_coding MGP_CBAJ_T0100961.1 MGP_CBAJ_G0039216.1 mouse_genomes_project X 137388307 137388438 - Gm23768 snoRNA snoRNA MGP_CBAJ_T0098146.1 MGP_CBAJ_G0036419.1 mouse_genomes_project X 164703023 164703117 - Gm23381 rRNA rRNA MGP_CBAJ_T0097243.1 MGP_CBAJ_G0035830.1 mouse_genomes_project X 158038740 158097716 + MGP_CBAJ_P0097243 Phf8 protein_coding protein_coding MGP_CBAJ_T0097244.1 MGP_CBAJ_G0035830.1 mouse_genomes_project X 158038740 158149956 + MGP_CBAJ_P0097244 Phf8 protein_coding protein_coding MGP_CBAJ_T0097245.1 MGP_CBAJ_G0035830.1 mouse_genomes_project X 158038740 158157945 + MGP_CBAJ_P0097245 Phf8 protein_coding protein_coding MGP_CBAJ_T0097246.1 MGP_CBAJ_G0035830.1 mouse_genomes_project X 158039237 158123565 + MGP_CBAJ_P0097246 Phf8 protein_coding protein_coding MGP_CBAJ_T0097247.1 MGP_CBAJ_G0035830.1 mouse_genomes_project X 158039249 158149956 + MGP_CBAJ_P0097247 Phf8 protein_coding protein_coding MGP_CBAJ_T0097248.1 MGP_CBAJ_G0035830.1 mouse_genomes_project X 158039255 158111155 + MGP_CBAJ_P0097248 Phf8 protein_coding protein_coding MGP_CBAJ_T0097249.1 MGP_CBAJ_G0035830.1 mouse_genomes_project X 158039255 158157947 + MGP_CBAJ_P0097249 Phf8 protein_coding protein_coding MGP_CBAJ_T0097250.1 MGP_CBAJ_G0035830.1 mouse_genomes_project X 158040428 158071240 + MGP_CBAJ_P0097250 Phf8 protein_coding protein_coding MGP_CBAJ_T0097251.1 MGP_CBAJ_G0035830.1 mouse_genomes_project X 158077560 158079784 + Phf8 protein_coding retained_intron MGP_CBAJ_T0097252.1 MGP_CBAJ_G0035830.1 mouse_genomes_project X 158092950 158102745 + MGP_CBAJ_P0097252 Phf8 protein_coding protein_coding MGP_CBAJ_T0097253.1 MGP_CBAJ_G0035830.1 mouse_genomes_project X 158153904 158157947 + Phf8 protein_coding retained_intron MGP_CBAJ_T0016477.1 MGP_CBAJ_G0014589.1 mouse_genomes_project X 136317733 136321181 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096116.1 MGP_CBAJ_G0035493.1 mouse_genomes_project X 74365661 74413438 + MGP_CBAJ_P0096116 Ikbkg protein_coding protein_coding MGP_CBAJ_T0096117.1 MGP_CBAJ_G0035493.1 mouse_genomes_project X 74365662 74431318 + MGP_CBAJ_P0096117 Ikbkg protein_coding protein_coding MGP_CBAJ_T0096118.1 MGP_CBAJ_G0035493.1 mouse_genomes_project X 74365662 74431318 + MGP_CBAJ_P0096118 Ikbkg protein_coding protein_coding MGP_CBAJ_T0096119.1 MGP_CBAJ_G0035493.1 mouse_genomes_project X 74365698 74419333 + MGP_CBAJ_P0096119 Ikbkg protein_coding protein_coding MGP_CBAJ_T0096122.1 MGP_CBAJ_G0035493.1 mouse_genomes_project X 74403978 74419395 + MGP_CBAJ_P0096122 Ikbkg protein_coding protein_coding MGP_CBAJ_T0096123.1 MGP_CBAJ_G0035493.1 mouse_genomes_project X 74404048 74426281 + MGP_CBAJ_P0096123 Ikbkg protein_coding protein_coding MGP_CBAJ_T0096124.1 MGP_CBAJ_G0035493.1 mouse_genomes_project X 74404056 74431394 + MGP_CBAJ_P0096124 Ikbkg protein_coding protein_coding MGP_CBAJ_T0096125.1 MGP_CBAJ_G0035493.1 mouse_genomes_project X 74404056 74431318 + MGP_CBAJ_P0096125 Ikbkg protein_coding protein_coding MGP_CBAJ_T0096126.1 MGP_CBAJ_G0035493.1 mouse_genomes_project X 74404077 74426640 + MGP_CBAJ_P0096126 Ikbkg protein_coding protein_coding MGP_CBAJ_T0096127.1 MGP_CBAJ_G0035493.1 mouse_genomes_project X 74404082 74412313 + MGP_CBAJ_P0096127 Ikbkg protein_coding protein_coding MGP_CBAJ_T0096129.1 MGP_CBAJ_G0035493.1 mouse_genomes_project X 74407346 74416615 + MGP_CBAJ_P0096129 Ikbkg protein_coding protein_coding MGP_CBAJ_T0096130.1 MGP_CBAJ_G0035493.1 mouse_genomes_project X 74408725 74422802 + MGP_CBAJ_P0096130 Ikbkg protein_coding protein_coding MGP_CBAJ_T0096131.1 MGP_CBAJ_G0035493.1 mouse_genomes_project X 74408759 74431318 + MGP_CBAJ_P0096131 Ikbkg protein_coding protein_coding MGP_CBAJ_T0096132.1 MGP_CBAJ_G0035493.1 mouse_genomes_project X 74409115 74427826 + MGP_CBAJ_P0096132 Ikbkg protein_coding protein_coding MGP_CBAJ_T0096133.1 MGP_CBAJ_G0035493.1 mouse_genomes_project X 74409148 74429060 + MGP_CBAJ_P0096133 Ikbkg protein_coding protein_coding MGP_CBAJ_T0096134.1 MGP_CBAJ_G0035493.1 mouse_genomes_project X 74409166 74412800 + Ikbkg protein_coding retained_intron MGP_CBAJ_T0096135.1 MGP_CBAJ_G0035493.1 mouse_genomes_project X 74409207 74423299 + MGP_CBAJ_P0096135 Ikbkg protein_coding protein_coding MGP_CBAJ_T0096136.1 MGP_CBAJ_G0035493.1 mouse_genomes_project X 74418331 74425763 + Ikbkg protein_coding processed_transcript MGP_CBAJ_T0010985.1 MGP_CBAJ_G0009123.1 mouse_genomes_project X 783859 783939 + Gm27360 miRNA miRNA MGP_CBAJ_T0005499.1 MGP_CBAJ_G0004629.1 mouse_genomes_project X 50275958 50320163 + A630012P03Rik antisense antisense MGP_CBAJ_T0005500.1 MGP_CBAJ_G0004629.1 mouse_genomes_project X 50275958 50320163 + A630012P03Rik antisense antisense MGP_CBAJ_T0016624.1 MGP_CBAJ_G0014736.1 mouse_genomes_project X 165418382 165418959 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016046.1 MGP_CBAJ_G0014158.1 mouse_genomes_project X 37472379 37472658 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095189.1 MGP_CBAJ_G0035228.1 mouse_genomes_project X 8971649 8996742 + MGP_CBAJ_P0095189 Nyx protein_coding protein_coding MGP_CBAJ_T0097590.1 MGP_CBAJ_G0035915.1 mouse_genomes_project X 175175588 175193458 - MGP_CBAJ_P0097590 Tlr8 protein_coding protein_coding MGP_CBAJ_T0097591.1 MGP_CBAJ_G0035915.1 mouse_genomes_project X 175175624 175192960 - MGP_CBAJ_P0097591 Tlr8 protein_coding protein_coding MGP_CBAJ_T0097592.1 MGP_CBAJ_G0035915.1 mouse_genomes_project X 175177711 175193471 - Tlr8 protein_coding processed_transcript MGP_CBAJ_T0097593.1 MGP_CBAJ_G0035915.1 mouse_genomes_project X 175178435 175193501 - MGP_CBAJ_P0097593 Tlr8 protein_coding protein_coding MGP_CBAJ_T0097594.1 MGP_CBAJ_G0035915.1 mouse_genomes_project X 175188524 175193456 - Tlr8 protein_coding processed_transcript MGP_CBAJ_T0016167.1 MGP_CBAJ_G0014279.1 mouse_genomes_project X 69946632 69948371 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009279.1 MGP_CBAJ_G0007440.1 mouse_genomes_project X 61274319 61280085 - lincRNA lincRNA MGP_CBAJ_T0096274.1 MGP_CBAJ_G0035541.1 mouse_genomes_project X 86752496 86773372 + MGP_CBAJ_P0096274 5430427O19Rik protein_coding protein_coding MGP_CBAJ_T0096786.1 MGP_CBAJ_G0035695.1 mouse_genomes_project X 120541806 120542154 + MGP_CBAJ_P0096786 H2afb2 protein_coding protein_coding MGP_CBAJ_T0016525.1 MGP_CBAJ_G0014637.1 mouse_genomes_project X 145983513 145984494 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095473.1 MGP_CBAJ_G0035323.1 mouse_genomes_project X 39399661 39401495 + MGP_CBAJ_P0095473 Gm43337 protein_coding protein_coding MGP_CBAJ_T0095699.1 MGP_CBAJ_G0035402.1 mouse_genomes_project X 58585625 58686474 - MGP_CBAJ_P0095699 Mcf2 protein_coding protein_coding MGP_CBAJ_T0095700.1 MGP_CBAJ_G0035402.1 mouse_genomes_project X 58585625 58724685 - MGP_CBAJ_P0095700 Mcf2 protein_coding protein_coding MGP_CBAJ_T0095701.1 MGP_CBAJ_G0035402.1 mouse_genomes_project X 58585628 58686417 - MGP_CBAJ_P0095701 Mcf2 protein_coding protein_coding MGP_CBAJ_T0096789.1 MGP_CBAJ_G0035698.1 mouse_genomes_project X 124054483 124058782 + MGP_CBAJ_P0096789 Pabpc5 protein_coding protein_coding MGP_CBAJ_T0096790.1 MGP_CBAJ_G0035698.1 mouse_genomes_project X 124054512 124058626 + MGP_CBAJ_P0096790 Pabpc5 protein_coding protein_coding MGP_CBAJ_T0095431.1 MGP_CBAJ_G0035319.1 mouse_genomes_project X 38237137 38457225 + Gria3 protein_coding retained_intron MGP_CBAJ_T0095432.1 MGP_CBAJ_G0035319.1 mouse_genomes_project X 38237371 38530114 + MGP_CBAJ_P0095432 Gria3 protein_coding protein_coding MGP_CBAJ_T0095433.1 MGP_CBAJ_G0035319.1 mouse_genomes_project X 38237507 38532130 + MGP_CBAJ_P0095433 Gria3 protein_coding protein_coding MGP_CBAJ_T0095434.1 MGP_CBAJ_G0035319.1 mouse_genomes_project X 38237601 38530121 + Gria3 protein_coding retained_intron MGP_CBAJ_T0095435.1 MGP_CBAJ_G0035319.1 mouse_genomes_project X 38237639 38532127 + MGP_CBAJ_P0095435 Gria3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0095436.1 MGP_CBAJ_G0035319.1 mouse_genomes_project X 38237685 38457680 + Gria3 protein_coding retained_intron MGP_CBAJ_T0095437.1 MGP_CBAJ_G0035319.1 mouse_genomes_project X 38237768 38526011 + MGP_CBAJ_P0095437 Gria3 protein_coding protein_coding MGP_CBAJ_T0095438.1 MGP_CBAJ_G0035319.1 mouse_genomes_project X 38238943 38314559 + MGP_CBAJ_P0095438 Gria3 protein_coding protein_coding MGP_CBAJ_T0095439.1 MGP_CBAJ_G0035319.1 mouse_genomes_project X 38454322 38465388 + Gria3 protein_coding retained_intron MGP_CBAJ_T0098219.1 MGP_CBAJ_G0036492.1 mouse_genomes_project X 95380789 95380927 - Gm23557 scaRNA scaRNA MGP_CBAJ_T0015965.1 MGP_CBAJ_G0014077.1 mouse_genomes_project X 5959612 5960045 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016272.1 MGP_CBAJ_G0014384.1 mouse_genomes_project X 93111348 93111736 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016259.1 MGP_CBAJ_G0014371.1 mouse_genomes_project X 90676904 90677243 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095710.1 MGP_CBAJ_G0035406.1 mouse_genomes_project X 59850390 59852925 - MGP_CBAJ_P0095710 Cdr1 protein_coding protein_coding MGP_CBAJ_T0016177.1 MGP_CBAJ_G0014289.1 mouse_genomes_project X 71388105 71388320 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016519.1 MGP_CBAJ_G0014631.1 mouse_genomes_project X 145053756 145055232 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096909.1 MGP_CBAJ_G0035733.1 mouse_genomes_project X 140172294 140214044 - MGP_CBAJ_P0096909 Zmat1 protein_coding protein_coding MGP_CBAJ_T0096910.1 MGP_CBAJ_G0035733.1 mouse_genomes_project X 140172297 140214068 - MGP_CBAJ_P0096910 Zmat1 protein_coding protein_coding MGP_CBAJ_T0096911.1 MGP_CBAJ_G0035733.1 mouse_genomes_project X 140173699 140179813 - Zmat1 protein_coding retained_intron MGP_CBAJ_T0095101.1 MGP_CBAJ_G0035197.1 mouse_genomes_project X 3149543 3163969 - MGP_CBAJ_P0095101 Ftsj1 protein_coding protein_coding MGP_CBAJ_T0095102.1 MGP_CBAJ_G0035197.1 mouse_genomes_project X 3151849 3163873 - MGP_CBAJ_P0095102 Ftsj1 protein_coding protein_coding MGP_CBAJ_T0095103.1 MGP_CBAJ_G0035197.1 mouse_genomes_project X 3151849 3163958 - MGP_CBAJ_P0095103 Ftsj1 protein_coding protein_coding MGP_CBAJ_T0095104.1 MGP_CBAJ_G0035197.1 mouse_genomes_project X 3156053 3163771 - Ftsj1 protein_coding retained_intron MGP_CBAJ_T0095105.1 MGP_CBAJ_G0035197.1 mouse_genomes_project X 3156350 3157919 - MGP_CBAJ_P0095105 Ftsj1 protein_coding protein_coding MGP_CBAJ_T0095106.1 MGP_CBAJ_G0035197.1 mouse_genomes_project X 3156381 3157241 - Ftsj1 protein_coding processed_transcript MGP_CBAJ_T0095107.1 MGP_CBAJ_G0035197.1 mouse_genomes_project X 3160084 3163926 - Ftsj1 protein_coding retained_intron MGP_CBAJ_T0095565.1 MGP_CBAJ_G0035351.1 mouse_genomes_project X 47279513 47300775 - MGP_CBAJ_P0095565 Igsf1 protein_coding protein_coding MGP_CBAJ_T0095566.1 MGP_CBAJ_G0035351.1 mouse_genomes_project X 47279513 47285222 - MGP_CBAJ_P0095566 Igsf1 protein_coding protein_coding MGP_CBAJ_T0095567.1 MGP_CBAJ_G0035351.1 mouse_genomes_project X 47283323 47298391 - MGP_CBAJ_P0095567 Igsf1 protein_coding protein_coding MGP_CBAJ_T0095568.1 MGP_CBAJ_G0035351.1 mouse_genomes_project X 47295992 47300775 - MGP_CBAJ_P0095568 Igsf1 protein_coding protein_coding MGP_CBAJ_T0095569.1 MGP_CBAJ_G0035351.1 mouse_genomes_project X 47297971 47300761 - Igsf1 protein_coding processed_transcript MGP_CBAJ_T0016170.1 MGP_CBAJ_G0014282.1 mouse_genomes_project X 69964729 69968161 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015946.1 MGP_CBAJ_G0014058.1 mouse_genomes_project X 2501104 2501508 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099701.1 MGP_CBAJ_G0037956.1 mouse_genomes_project X 119074528 119074652 - Gm25366 snRNA snRNA MGP_CBAJ_T0016292.1 MGP_CBAJ_G0014404.1 mouse_genomes_project X 96504250 96504728 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095364.1 MGP_CBAJ_G0035285.1 mouse_genomes_project X 33331686 33414896 - MGP_CBAJ_P0095364 Sept6 protein_coding protein_coding MGP_CBAJ_T0095365.1 MGP_CBAJ_G0035285.1 mouse_genomes_project X 33333806 33414896 - MGP_CBAJ_P0095365 Sept6 protein_coding protein_coding MGP_CBAJ_T0095366.1 MGP_CBAJ_G0035285.1 mouse_genomes_project X 33343169 33414896 - MGP_CBAJ_P0095366 Sept6 protein_coding protein_coding MGP_CBAJ_T0095367.1 MGP_CBAJ_G0035285.1 mouse_genomes_project X 33391852 33417028 - MGP_CBAJ_P0095367 Sept6 protein_coding protein_coding MGP_CBAJ_T0095368.1 MGP_CBAJ_G0035285.1 mouse_genomes_project X 33397158 33414731 - Sept6 protein_coding retained_intron MGP_CBAJ_T0016233.1 MGP_CBAJ_G0014345.1 mouse_genomes_project X 86073199 86073402 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016198.1 MGP_CBAJ_G0014310.1 mouse_genomes_project X 76545785 76546089 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011091.1 MGP_CBAJ_G0009229.1 mouse_genomes_project X 153312857 153312944 + Mir1912 miRNA miRNA MGP_CBAJ_T0095489.1 MGP_CBAJ_G0035329.1 mouse_genomes_project X 42259238 42261126 + MGP_CBAJ_P0095489 Prr32 protein_coding protein_coding MGP_CBAJ_T0095060.1 MGP_CBAJ_G0035188.1 mouse_genomes_project X 2801268 2811792 - MGP_CBAJ_P0095060 Gata1 protein_coding protein_coding MGP_CBAJ_T0095061.1 MGP_CBAJ_G0035188.1 mouse_genomes_project X 2806337 2823544 - MGP_CBAJ_P0095061 Gata1 protein_coding protein_coding MGP_CBAJ_T0095062.1 MGP_CBAJ_G0035188.1 mouse_genomes_project X 2806926 2808064 - MGP_CBAJ_P0095062 Gata1 protein_coding protein_coding MGP_CBAJ_T0016590.1 MGP_CBAJ_G0014702.1 mouse_genomes_project X 158288225 158288402 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095387.1 MGP_CBAJ_G0035299.1 mouse_genomes_project X 34159846 34170021 - MGP_CBAJ_P0095387 protein_coding protein_coding MGP_CBAJ_T0009281.1 MGP_CBAJ_G0007442.1 mouse_genomes_project X 68026892 68038445 - Fmr1os lincRNA lincRNA MGP_CBAJ_T0011650.1 MGP_CBAJ_G0009788.1 mouse_genomes_project X 143477171 143477456 - Gm25393 misc_RNA misc_RNA MGP_CBAJ_T0016367.1 MGP_CBAJ_G0014479.1 mouse_genomes_project X 108011233 108012014 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011103.1 MGP_CBAJ_G0009241.1 mouse_genomes_project X 174945462 174945571 - Gm22368 miRNA miRNA MGP_CBAJ_T0099708.1 MGP_CBAJ_G0037963.1 mouse_genomes_project X 144145116 144145221 - Gm23958 snRNA snRNA MGP_CBAJ_T0096138.1 MGP_CBAJ_G0035496.1 mouse_genomes_project X 74586731 74587679 + MGP_CBAJ_P0096138 Olfr1325 protein_coding protein_coding MGP_CBAJ_T0096213.1 MGP_CBAJ_G0035522.1 mouse_genomes_project X 77942588 77982515 - MGP_CBAJ_P0096213 Prkx protein_coding protein_coding MGP_CBAJ_T0096214.1 MGP_CBAJ_G0035522.1 mouse_genomes_project X 77954839 77982223 - MGP_CBAJ_P0096214 Prkx protein_coding protein_coding MGP_CBAJ_T0102243.1 MGP_CBAJ_G0040272.1 mouse_genomes_project X 54014358 54028068 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016003.1 MGP_CBAJ_G0014115.1 mouse_genomes_project X 15680516 15680913 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011070.1 MGP_CBAJ_G0009208.1 mouse_genomes_project X 106381194 106381243 + Mir374c miRNA miRNA MGP_CBAJ_T0016328.1 MGP_CBAJ_G0014440.1 mouse_genomes_project X 104364016 104364516 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016033.1 MGP_CBAJ_G0014145.1 mouse_genomes_project X 35393569 35393863 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016478.1 MGP_CBAJ_G0014590.1 mouse_genomes_project X 136642309 136644436 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016040.1 MGP_CBAJ_G0014152.1 mouse_genomes_project X 36493552 36494122 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097128.1 MGP_CBAJ_G0035811.1 mouse_genomes_project X 150381186 150388532 + MGP_CBAJ_P0097128 Alg13 protein_coding protein_coding MGP_CBAJ_T0097129.1 MGP_CBAJ_G0035811.1 mouse_genomes_project X 150381382 150440072 + MGP_CBAJ_P0097129 Alg13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0097130.1 MGP_CBAJ_G0035811.1 mouse_genomes_project X 150381385 150387485 + MGP_CBAJ_P0097130 Alg13 protein_coding protein_coding MGP_CBAJ_T0097131.1 MGP_CBAJ_G0035811.1 mouse_genomes_project X 150381385 150387512 + MGP_CBAJ_P0097131 Alg13 protein_coding protein_coding MGP_CBAJ_T0097132.1 MGP_CBAJ_G0035811.1 mouse_genomes_project X 150381385 150404626 + MGP_CBAJ_P0097132 Alg13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0097133.1 MGP_CBAJ_G0035811.1 mouse_genomes_project X 150381400 150440072 + MGP_CBAJ_P0097133 Alg13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0097134.1 MGP_CBAJ_G0035811.1 mouse_genomes_project X 150381405 150387356 + Alg13 protein_coding processed_transcript MGP_CBAJ_T0097135.1 MGP_CBAJ_G0035811.1 mouse_genomes_project X 150381405 150440077 + MGP_CBAJ_P0097135 Alg13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0097136.1 MGP_CBAJ_G0035811.1 mouse_genomes_project X 150400770 150403893 + Alg13 protein_coding processed_transcript MGP_CBAJ_T0097137.1 MGP_CBAJ_G0035811.1 mouse_genomes_project X 150401395 150407323 + Alg13 protein_coding retained_intron MGP_CBAJ_T0097138.1 MGP_CBAJ_G0035811.1 mouse_genomes_project X 150403896 150440077 + Alg13 protein_coding processed_transcript MGP_CBAJ_T0097139.1 MGP_CBAJ_G0035811.1 mouse_genomes_project X 150405327 150410556 + Alg13 protein_coding retained_intron MGP_CBAJ_T0097140.1 MGP_CBAJ_G0035811.1 mouse_genomes_project X 150405611 150439431 + MGP_CBAJ_P0097140 Alg13 protein_coding unknown_likely_coding MGP_CBAJ_T0097141.1 MGP_CBAJ_G0035811.1 mouse_genomes_project X 150411638 150440077 + Alg13 protein_coding processed_transcript MGP_CBAJ_T0097142.1 MGP_CBAJ_G0035811.1 mouse_genomes_project X 150422710 150435398 + Alg13 protein_coding processed_transcript MGP_CBAJ_T0095046.1 MGP_CBAJ_G0035183.1 mouse_genomes_project X 2744148 2744291 - MGP_CBAJ_P0095046 protein_coding protein_coding MGP_CBAJ_T0095247.1 MGP_CBAJ_G0035250.1 mouse_genomes_project X 16648492 16684715 + MGP_CBAJ_P0095247 Rbm10 protein_coding protein_coding MGP_CBAJ_T0095248.1 MGP_CBAJ_G0035250.1 mouse_genomes_project X 16648611 16684728 + MGP_CBAJ_P0095248 Rbm10 protein_coding protein_coding MGP_CBAJ_T0095249.1 MGP_CBAJ_G0035250.1 mouse_genomes_project X 16648772 16684728 + MGP_CBAJ_P0095249 Rbm10 protein_coding protein_coding MGP_CBAJ_T0095250.1 MGP_CBAJ_G0035250.1 mouse_genomes_project X 16648774 16683023 + Rbm10 protein_coding processed_transcript MGP_CBAJ_T0095251.1 MGP_CBAJ_G0035250.1 mouse_genomes_project X 16651087 16684511 + MGP_CBAJ_P0095251 Rbm10 protein_coding protein_coding MGP_CBAJ_T0095252.1 MGP_CBAJ_G0035250.1 mouse_genomes_project X 16651087 16684511 + MGP_CBAJ_P0095252 Rbm10 protein_coding protein_coding MGP_CBAJ_T0095253.1 MGP_CBAJ_G0035250.1 mouse_genomes_project X 16651087 16684511 + MGP_CBAJ_P0095253 Rbm10 protein_coding protein_coding MGP_CBAJ_T0096140.1 MGP_CBAJ_G0035498.1 mouse_genomes_project X 74634126 74640963 - MGP_CBAJ_P0096140 protein_coding protein_coding MGP_CBAJ_T0095662.1 MGP_CBAJ_G0035392.1 mouse_genomes_project X 55368127 55389314 + MGP_CBAJ_P0095662 Vgll1 protein_coding protein_coding MGP_CBAJ_T0095663.1 MGP_CBAJ_G0035392.1 mouse_genomes_project X 55369333 55388303 + MGP_CBAJ_P0095663 Vgll1 protein_coding protein_coding MGP_CBAJ_T0095664.1 MGP_CBAJ_G0035392.1 mouse_genomes_project X 55369395 55389314 + MGP_CBAJ_P0095664 Vgll1 protein_coding protein_coding MGP_CBAJ_T0095665.1 MGP_CBAJ_G0035392.1 mouse_genomes_project X 55380513 55384977 + MGP_CBAJ_P0095665 Vgll1 protein_coding protein_coding MGP_CBAJ_T0096986.1 MGP_CBAJ_G0035766.1 mouse_genomes_project X 142589522 142589818 + MGP_CBAJ_P0096986 Vma21-ps protein_coding protein_coding MGP_CBAJ_T0009267.1 MGP_CBAJ_G0007431.1 mouse_genomes_project X 17482178 17490236 - lincRNA lincRNA MGP_CBAJ_T0016668.1 MGP_CBAJ_G0014780.1 mouse_genomes_project X 175982001 175982721 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095201.1 MGP_CBAJ_G0035230.1 mouse_genomes_project X 9146883 9155576 + MGP_CBAJ_P0095201 Gpr34 protein_coding protein_coding MGP_CBAJ_T0095202.1 MGP_CBAJ_G0035230.1 mouse_genomes_project X 9147563 9155578 + MGP_CBAJ_P0095202 Gpr34 protein_coding protein_coding MGP_CBAJ_T0099665.1 MGP_CBAJ_G0037920.1 mouse_genomes_project X 35973866 35973971 - Gm26437 snRNA snRNA MGP_CBAJ_T0095124.1 MGP_CBAJ_G0035211.1 mouse_genomes_project X 4436840 4454547 + MGP_CBAJ_P0095124 Xk protein_coding protein_coding MGP_CBAJ_T0097078.1 MGP_CBAJ_G0035793.1 mouse_genomes_project X 146963895 146972146 - MGP_CBAJ_P0097078 Psmd10 protein_coding protein_coding MGP_CBAJ_T0016343.1 MGP_CBAJ_G0014455.1 mouse_genomes_project X 105990809 105991328 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095383.1 MGP_CBAJ_G0035295.1 mouse_genomes_project X 33912910 33919326 + MGP_CBAJ_P0095383 protein_coding protein_coding MGP_CBAJ_T0095018.1 MGP_CBAJ_G0035177.1 mouse_genomes_project X 2647393 2663249 + MGP_CBAJ_P0095018 Kcnd1 protein_coding protein_coding MGP_CBAJ_T0095019.1 MGP_CBAJ_G0035177.1 mouse_genomes_project X 2647411 2648372 + Kcnd1 protein_coding processed_transcript MGP_CBAJ_T0016179.1 MGP_CBAJ_G0014291.1 mouse_genomes_project X 73126884 73127316 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016518.1 MGP_CBAJ_G0014630.1 mouse_genomes_project X 144991213 144991923 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101223.1 MGP_CBAJ_G0039372.1 mouse_genomes_project X 110771626 110772845 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101224.1 MGP_CBAJ_G0039372.1 mouse_genomes_project X 110771635 110772790 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0005536.1 MGP_CBAJ_G0004658.1 mouse_genomes_project X 178092153 178098321 - Gm15726 antisense antisense MGP_CBAJ_T0095309.1 MGP_CBAJ_G0035264.1 mouse_genomes_project X 17253798 17256720 - MGP_CBAJ_P0095309 Gm21876 protein_coding protein_coding MGP_CBAJ_T0097028.1 MGP_CBAJ_G0035780.1 mouse_genomes_project X 145576688 145580405 - MGP_CBAJ_P0097028 Gm15013 protein_coding protein_coding MGP_CBAJ_T0097029.1 MGP_CBAJ_G0035780.1 mouse_genomes_project X 145576770 145580299 - Gm15013 protein_coding translated_processed_pseudogene MGP_CBAJ_T0095069.1 MGP_CBAJ_G0035191.1 mouse_genomes_project X 2961957 2972927 - MGP_CBAJ_P0095069 Was protein_coding protein_coding MGP_CBAJ_T0095789.1 MGP_CBAJ_G0035432.1 mouse_genomes_project X 71187769 71193659 + MGP_CBAJ_P0095789 Hmgb3 protein_coding unknown_likely_coding MGP_CBAJ_T0095790.1 MGP_CBAJ_G0035432.1 mouse_genomes_project X 71188732 71193128 + MGP_CBAJ_P0095790 Hmgb3 protein_coding protein_coding MGP_CBAJ_T0095791.1 MGP_CBAJ_G0035432.1 mouse_genomes_project X 71191637 71193127 + Hmgb3 protein_coding retained_intron MGP_CBAJ_T0097444.1 MGP_CBAJ_G0035876.1 mouse_genomes_project X 167913559 168026156 - MGP_CBAJ_P0097444 Ppef1 protein_coding protein_coding MGP_CBAJ_T0097445.1 MGP_CBAJ_G0035876.1 mouse_genomes_project X 167936364 168038822 - MGP_CBAJ_P0097445 Ppef1 protein_coding protein_coding MGP_CBAJ_T0097446.1 MGP_CBAJ_G0035876.1 mouse_genomes_project X 167996393 168026120 - MGP_CBAJ_P0097446 Ppef1 protein_coding protein_coding MGP_CBAJ_T0016631.1 MGP_CBAJ_G0014743.1 mouse_genomes_project X 167272303 167272737 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095246.1 MGP_CBAJ_G0035249.1 mouse_genomes_project X 16646315 16648609 - MGP_CBAJ_P0095246 Ndufb11 protein_coding protein_coding MGP_CBAJ_T0016472.1 MGP_CBAJ_G0014584.1 mouse_genomes_project X 135212069 135212745 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016227.1 MGP_CBAJ_G0014339.1 mouse_genomes_project X 82913908 82914194 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096764.1 MGP_CBAJ_G0035687.1 mouse_genomes_project X 116097127 116128567 + Zfp711 protein_coding retained_intron MGP_CBAJ_T0096765.1 MGP_CBAJ_G0035687.1 mouse_genomes_project X 116097127 116136395 + MGP_CBAJ_P0096765 Zfp711 protein_coding protein_coding MGP_CBAJ_T0096766.1 MGP_CBAJ_G0035687.1 mouse_genomes_project X 116098185 116134889 + MGP_CBAJ_P0096766 Zfp711 protein_coding unknown_likely_coding MGP_CBAJ_T0096767.1 MGP_CBAJ_G0035687.1 mouse_genomes_project X 116111860 116133206 + MGP_CBAJ_P0096767 Zfp711 protein_coding protein_coding MGP_CBAJ_T0016286.1 MGP_CBAJ_G0014398.1 mouse_genomes_project X 96185218 96186071 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097551.1 MGP_CBAJ_G0035904.1 mouse_genomes_project X 172755729 172772522 + MGP_CBAJ_P0097551 Fancb protein_coding protein_coding MGP_CBAJ_T0097552.1 MGP_CBAJ_G0035904.1 mouse_genomes_project X 172755729 172772522 + MGP_CBAJ_P0097552 Fancb protein_coding protein_coding MGP_CBAJ_T0097553.1 MGP_CBAJ_G0035904.1 mouse_genomes_project X 172755849 172772525 + MGP_CBAJ_P0097553 Fancb protein_coding protein_coding MGP_CBAJ_T0016190.1 MGP_CBAJ_G0014302.1 mouse_genomes_project X 75061046 75062062 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095339.1 MGP_CBAJ_G0035276.1 mouse_genomes_project X 32802508 32803687 + MGP_CBAJ_P0095339 protein_coding protein_coding MGP_CBAJ_T0016428.1 MGP_CBAJ_G0014540.1 mouse_genomes_project X 119393494 119393884 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096709.1 MGP_CBAJ_G0035667.1 mouse_genomes_project X 110920350 110941234 + MGP_CBAJ_P0096709 Tbx22 protein_coding protein_coding MGP_CBAJ_T0096710.1 MGP_CBAJ_G0035667.1 mouse_genomes_project X 110920350 110933561 + MGP_CBAJ_P0096710 Tbx22 protein_coding nonsense_mediated_decay MGP_CBAJ_T0096711.1 MGP_CBAJ_G0035667.1 mouse_genomes_project X 110928898 110939222 + MGP_CBAJ_P0096711 Tbx22 protein_coding protein_coding MGP_CBAJ_T0096712.1 MGP_CBAJ_G0035667.1 mouse_genomes_project X 110931350 110941237 + MGP_CBAJ_P0096712 Tbx22 protein_coding protein_coding MGP_CBAJ_T0096713.1 MGP_CBAJ_G0035667.1 mouse_genomes_project X 110931402 110939947 + MGP_CBAJ_P0096713 Tbx22 protein_coding protein_coding MGP_CBAJ_T0096942.1 MGP_CBAJ_G0035745.1 mouse_genomes_project X 141401300 141402832 + MGP_CBAJ_P0096942 protein_coding protein_coding MGP_CBAJ_T0095659.1 MGP_CBAJ_G0035391.1 mouse_genomes_project X 55333241 55336865 + MGP_CBAJ_P0095659 Htatsf1 protein_coding protein_coding MGP_CBAJ_T0095660.1 MGP_CBAJ_G0035391.1 mouse_genomes_project X 55333273 55346842 + MGP_CBAJ_P0095660 Htatsf1 protein_coding protein_coding MGP_CBAJ_T0095661.1 MGP_CBAJ_G0035391.1 mouse_genomes_project X 55333556 55336863 + Htatsf1 protein_coding retained_intron MGP_CBAJ_T0096864.1 MGP_CBAJ_G0035722.1 mouse_genomes_project X 139581575 139597901 - MGP_CBAJ_P0096864 Taf7l protein_coding protein_coding MGP_CBAJ_T0096865.1 MGP_CBAJ_G0035722.1 mouse_genomes_project X 139582015 139596448 - MGP_CBAJ_P0096865 Taf7l protein_coding protein_coding MGP_CBAJ_T0096866.1 MGP_CBAJ_G0035722.1 mouse_genomes_project X 139591330 139596443 - Taf7l protein_coding processed_transcript MGP_CBAJ_T0009298.1 MGP_CBAJ_G0007456.1 mouse_genomes_project X 106292696 106306877 + Jpx lincRNA lincRNA MGP_CBAJ_T0009299.1 MGP_CBAJ_G0007456.1 mouse_genomes_project X 106292706 106293750 + Jpx lincRNA lincRNA MGP_CBAJ_T0009300.1 MGP_CBAJ_G0007456.1 mouse_genomes_project X 106292899 106303684 + Jpx lincRNA lincRNA MGP_CBAJ_T0009301.1 MGP_CBAJ_G0007456.1 mouse_genomes_project X 106292924 106303405 + Jpx lincRNA lincRNA MGP_CBAJ_T0016460.1 MGP_CBAJ_G0014572.1 mouse_genomes_project X 127108311 127109052 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095682.1 MGP_CBAJ_G0035397.1 mouse_genomes_project X 55819261 55826373 - MGP_CBAJ_P0095682 Gpr101 protein_coding protein_coding MGP_CBAJ_T0095303.1 MGP_CBAJ_G0035262.1 mouse_genomes_project X 17154124 17165708 - MGP_CBAJ_P0095303 Zfp300 protein_coding protein_coding MGP_CBAJ_T0095304.1 MGP_CBAJ_G0035262.1 mouse_genomes_project X 17158064 17165728 - MGP_CBAJ_P0095304 Zfp300 protein_coding unknown_likely_coding MGP_CBAJ_T0095305.1 MGP_CBAJ_G0035262.1 mouse_genomes_project X 17160420 17165465 - Zfp300 protein_coding retained_intron MGP_CBAJ_T0095306.1 MGP_CBAJ_G0035262.1 mouse_genomes_project X 17160728 17166006 - Zfp300 protein_coding processed_transcript MGP_CBAJ_T0018360.1 MGP_CBAJ_G0015516.1 mouse_genomes_project X 50452424 50454455 - Kis2 processed_transcript processed_transcript MGP_CBAJ_T0018361.1 MGP_CBAJ_G0015516.1 mouse_genomes_project X 50452424 50454455 - Kis2 processed_transcript processed_transcript MGP_CBAJ_T0018362.1 MGP_CBAJ_G0015516.1 mouse_genomes_project X 50452424 50454455 - Kis2 processed_transcript processed_transcript MGP_CBAJ_T0018363.1 MGP_CBAJ_G0015516.1 mouse_genomes_project X 50452426 50454822 - Kis2 processed_transcript processed_transcript MGP_CBAJ_T0009324.1 MGP_CBAJ_G0007470.1 mouse_genomes_project X 157297326 157297867 - Gm27191 lincRNA lincRNA MGP_CBAJ_T0095379.1 MGP_CBAJ_G0035291.1 mouse_genomes_project X 33646335 33649901 - MGP_CBAJ_P0095379 Ndufa1 protein_coding protein_coding MGP_CBAJ_T0005486.1 MGP_CBAJ_G0004621.1 mouse_genomes_project X 2905433 2952749 + Gm14820 antisense antisense MGP_CBAJ_T0005487.1 MGP_CBAJ_G0004621.1 mouse_genomes_project X 2926170 2940336 + Gm14820 antisense antisense MGP_CBAJ_T0005488.1 MGP_CBAJ_G0004621.1 mouse_genomes_project X 2926246 2953467 + Gm14820 antisense antisense MGP_CBAJ_T0005489.1 MGP_CBAJ_G0004621.1 mouse_genomes_project X 2926326 2955127 + Gm14820 antisense antisense MGP_CBAJ_T0005490.1 MGP_CBAJ_G0004621.1 mouse_genomes_project X 2930536 2953464 + Gm14820 antisense antisense MGP_CBAJ_T0095798.1 MGP_CBAJ_G0035436.1 mouse_genomes_project X 71641966 71645994 + MGP_CBAJ_P0095798 Prrg3 protein_coding protein_coding MGP_CBAJ_T0095799.1 MGP_CBAJ_G0035436.1 mouse_genomes_project X 71641967 71649439 + MGP_CBAJ_P0095799 Prrg3 protein_coding protein_coding MGP_CBAJ_T0095800.1 MGP_CBAJ_G0035436.1 mouse_genomes_project X 71642324 71652057 + MGP_CBAJ_P0095800 Prrg3 protein_coding protein_coding MGP_CBAJ_T0095594.1 MGP_CBAJ_G0035361.1 mouse_genomes_project X 49620058 49624135 - MGP_CBAJ_P0095594 1700080O16Rik protein_coding protein_coding MGP_CBAJ_T0095595.1 MGP_CBAJ_G0035361.1 mouse_genomes_project X 49620255 49622411 - MGP_CBAJ_P0095595 1700080O16Rik protein_coding protein_coding MGP_CBAJ_T0097254.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158342648 158344104 + Huwe1 protein_coding processed_transcript MGP_CBAJ_T0097255.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158342723 158346352 + Huwe1 protein_coding processed_transcript MGP_CBAJ_T0097256.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158343154 158348701 + Huwe1 protein_coding processed_transcript MGP_CBAJ_T0097257.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158345083 158415900 + MGP_CBAJ_P0097257 Huwe1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0097258.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158345101 158348701 + Huwe1 protein_coding processed_transcript MGP_CBAJ_T0097259.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158345167 158396052 + Huwe1 protein_coding retained_intron MGP_CBAJ_T0097260.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158345167 158479583 + MGP_CBAJ_P0097260 Huwe1 protein_coding protein_coding MGP_CBAJ_T0097261.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158345178 158479585 + MGP_CBAJ_P0097261 Huwe1 protein_coding unknown_likely_coding MGP_CBAJ_T0097262.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158345187 158403396 + Huwe1 protein_coding retained_intron MGP_CBAJ_T0097263.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158345187 158416415 + Huwe1 protein_coding retained_intron MGP_CBAJ_T0097264.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158345498 158378127 + MGP_CBAJ_P0097264 Huwe1 protein_coding protein_coding MGP_CBAJ_T0097265.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158345502 158390440 + Huwe1 protein_coding processed_transcript MGP_CBAJ_T0097266.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158345502 158415177 + Huwe1 protein_coding retained_intron MGP_CBAJ_T0097267.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158345502 158382959 + MGP_CBAJ_P0097267 Huwe1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0097268.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158378098 158479583 + MGP_CBAJ_P0097268 Huwe1 protein_coding protein_coding MGP_CBAJ_T0097269.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158403016 158434018 + MGP_CBAJ_P0097269 Huwe1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0097270.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158407369 158416769 + MGP_CBAJ_P0097270 Huwe1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0097271.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158425452 158426167 + Huwe1 protein_coding processed_transcript MGP_CBAJ_T0097272.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158447860 158452784 + Huwe1 protein_coding retained_intron MGP_CBAJ_T0097273.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158451711 158453256 + Huwe1 protein_coding retained_intron MGP_CBAJ_T0097274.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158451711 158453059 + Huwe1 protein_coding retained_intron MGP_CBAJ_T0097275.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158464148 158465479 + Huwe1 protein_coding retained_intron MGP_CBAJ_T0097276.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158464209 158466600 + Huwe1 protein_coding retained_intron MGP_CBAJ_T0097277.1 MGP_CBAJ_G0035831.1 mouse_genomes_project X 158467124 158471937 + Huwe1 protein_coding retained_intron MGP_CBAJ_T0005521.1 MGP_CBAJ_G0004648.1 mouse_genomes_project X 147685471 147686797 + Gm15295 antisense antisense MGP_CBAJ_T0098222.1 MGP_CBAJ_G0036495.1 mouse_genomes_project X 125584256 125584377 - Gm25825 scaRNA scaRNA MGP_CBAJ_T0097562.1 MGP_CBAJ_G0035908.1 mouse_genomes_project X 174100355 174255238 + MGP_CBAJ_P0097562 Gpm6b protein_coding protein_coding MGP_CBAJ_T0097563.1 MGP_CBAJ_G0035908.1 mouse_genomes_project X 174100416 174255238 + MGP_CBAJ_P0097563 Gpm6b protein_coding protein_coding MGP_CBAJ_T0097564.1 MGP_CBAJ_G0035908.1 mouse_genomes_project X 174100416 174255238 + MGP_CBAJ_P0097564 Gpm6b protein_coding protein_coding MGP_CBAJ_T0097565.1 MGP_CBAJ_G0035908.1 mouse_genomes_project X 174210859 174255238 + MGP_CBAJ_P0097565 Gpm6b protein_coding protein_coding MGP_CBAJ_T0097566.1 MGP_CBAJ_G0035908.1 mouse_genomes_project X 174210859 174250251 + MGP_CBAJ_P0097566 Gpm6b protein_coding nonsense_mediated_decay MGP_CBAJ_T0097567.1 MGP_CBAJ_G0035908.1 mouse_genomes_project X 174210859 174255238 + MGP_CBAJ_P0097567 Gpm6b protein_coding protein_coding MGP_CBAJ_T0097568.1 MGP_CBAJ_G0035908.1 mouse_genomes_project X 174210859 174255238 + MGP_CBAJ_P0097568 Gpm6b protein_coding protein_coding MGP_CBAJ_T0097569.1 MGP_CBAJ_G0035908.1 mouse_genomes_project X 174210859 174255238 + MGP_CBAJ_P0097569 Gpm6b protein_coding protein_coding MGP_CBAJ_T0097570.1 MGP_CBAJ_G0035908.1 mouse_genomes_project X 174210859 174255238 + MGP_CBAJ_P0097570 Gpm6b protein_coding protein_coding MGP_CBAJ_T0097571.1 MGP_CBAJ_G0035908.1 mouse_genomes_project X 174210859 174255238 + MGP_CBAJ_P0097571 Gpm6b protein_coding protein_coding MGP_CBAJ_T0097572.1 MGP_CBAJ_G0035908.1 mouse_genomes_project X 174210859 174250251 + MGP_CBAJ_P0097572 Gpm6b protein_coding nonsense_mediated_decay MGP_CBAJ_T0097573.1 MGP_CBAJ_G0035908.1 mouse_genomes_project X 174211009 174239558 + Gpm6b protein_coding retained_intron MGP_CBAJ_T0016588.1 MGP_CBAJ_G0014700.1 mouse_genomes_project X 158016401 158016557 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016553.1 MGP_CBAJ_G0014665.1 mouse_genomes_project X 150204617 150206913 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097354.1 MGP_CBAJ_G0035857.1 mouse_genomes_project X 162177508 162192094 - MGP_CBAJ_P0097354 Prdx4 protein_coding protein_coding MGP_CBAJ_T0097355.1 MGP_CBAJ_G0035857.1 mouse_genomes_project X 162182072 162194365 - MGP_CBAJ_P0097355 Prdx4 protein_coding protein_coding MGP_CBAJ_T0097356.1 MGP_CBAJ_G0035857.1 mouse_genomes_project X 162190418 162192101 - Prdx4 protein_coding processed_transcript MGP_CBAJ_T0016500.1 MGP_CBAJ_G0014612.1 mouse_genomes_project X 142009994 142011116 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016174.1 MGP_CBAJ_G0014286.1 mouse_genomes_project X 70322189 70322794 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096494.1 MGP_CBAJ_G0035606.1 mouse_genomes_project X 103783292 103785892 - Gm614 protein_coding processed_transcript MGP_CBAJ_T0096495.1 MGP_CBAJ_G0035606.1 mouse_genomes_project X 103783292 103785909 - MGP_CBAJ_P0096495 Gm614 protein_coding protein_coding MGP_CBAJ_T0096762.1 MGP_CBAJ_G0035686.1 mouse_genomes_project X 115978403 116055179 + MGP_CBAJ_P0096762 2010106E10Rik protein_coding protein_coding MGP_CBAJ_T0096763.1 MGP_CBAJ_G0035686.1 mouse_genomes_project X 115978403 116055189 + MGP_CBAJ_P0096763 2010106E10Rik protein_coding protein_coding MGP_CBAJ_T0095811.1 MGP_CBAJ_G0035442.1 mouse_genomes_project X 72109143 72333398 - MGP_CBAJ_P0095811 Gabra3 protein_coding protein_coding MGP_CBAJ_T0095812.1 MGP_CBAJ_G0035442.1 mouse_genomes_project X 72111037 72335372 - MGP_CBAJ_P0095812 Gabra3 protein_coding protein_coding MGP_CBAJ_T0095813.1 MGP_CBAJ_G0035442.1 mouse_genomes_project X 72188182 72334783 - Gabra3 protein_coding processed_transcript MGP_CBAJ_T0096570.1 MGP_CBAJ_G0035621.1 mouse_genomes_project X 104768867 104777090 + MGP_CBAJ_P0096570 Pin4 protein_coding protein_coding MGP_CBAJ_T0096571.1 MGP_CBAJ_G0035621.1 mouse_genomes_project X 104768989 104777087 + Pin4 protein_coding processed_transcript MGP_CBAJ_T0009335.1 MGP_CBAJ_G0007475.1 mouse_genomes_project X 169238107 169248687 - Gm15205 lincRNA lincRNA MGP_CBAJ_T0016150.1 MGP_CBAJ_G0014262.1 mouse_genomes_project X 65988418 65989611 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095108.1 MGP_CBAJ_G0035198.1 mouse_genomes_project X 3184158 3189272 + MGP_CBAJ_P0095108 Slc38a5 protein_coding protein_coding MGP_CBAJ_T0095109.1 MGP_CBAJ_G0035198.1 mouse_genomes_project X 3184176 3196518 + MGP_CBAJ_P0095109 Slc38a5 protein_coding protein_coding MGP_CBAJ_T0095110.1 MGP_CBAJ_G0035198.1 mouse_genomes_project X 3187767 3196518 + MGP_CBAJ_P0095110 Slc38a5 protein_coding protein_coding MGP_CBAJ_T0095111.1 MGP_CBAJ_G0035198.1 mouse_genomes_project X 3188030 3196513 + MGP_CBAJ_P0095111 Slc38a5 protein_coding protein_coding MGP_CBAJ_T0016083.1 MGP_CBAJ_G0014195.1 mouse_genomes_project X 48824431 48825531 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099689.1 MGP_CBAJ_G0037944.1 mouse_genomes_project X 103763148 103763282 + Gm22472 snRNA snRNA MGP_CBAJ_T0016139.1 MGP_CBAJ_G0014251.1 mouse_genomes_project X 61463120 61463608 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011008.1 MGP_CBAJ_G0009146.1 mouse_genomes_project X 48826655 48826735 - Gm22801 miRNA miRNA MGP_CBAJ_T0016470.1 MGP_CBAJ_G0014582.1 mouse_genomes_project X 134217734 134218057 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100930.1 MGP_CBAJ_G0039185.1 mouse_genomes_project X 49490380 49490497 + Gm22539 snoRNA snoRNA MGP_CBAJ_T0097035.1 MGP_CBAJ_G0035783.1 mouse_genomes_project X 145706091 145756135 - MGP_CBAJ_P0097035 Morc4 protein_coding protein_coding MGP_CBAJ_T0097036.1 MGP_CBAJ_G0035783.1 mouse_genomes_project X 145706363 145756158 - MGP_CBAJ_P0097036 Morc4 protein_coding protein_coding MGP_CBAJ_T0097037.1 MGP_CBAJ_G0035783.1 mouse_genomes_project X 145707134 145742358 - MGP_CBAJ_P0097037 Morc4 protein_coding protein_coding MGP_CBAJ_T0097038.1 MGP_CBAJ_G0035783.1 mouse_genomes_project X 145708690 145720563 - Morc4 protein_coding retained_intron MGP_CBAJ_T0097039.1 MGP_CBAJ_G0035783.1 mouse_genomes_project X 145720938 145739477 - MGP_CBAJ_P0097039 Morc4 protein_coding protein_coding MGP_CBAJ_T0097040.1 MGP_CBAJ_G0035783.1 mouse_genomes_project X 145740815 145756106 - Morc4 protein_coding retained_intron MGP_CBAJ_T0097041.1 MGP_CBAJ_G0035783.1 mouse_genomes_project X 145740822 145756103 - Morc4 protein_coding processed_transcript MGP_CBAJ_T0097042.1 MGP_CBAJ_G0035783.1 mouse_genomes_project X 145743229 145755891 - Morc4 protein_coding retained_intron MGP_CBAJ_T0097043.1 MGP_CBAJ_G0035783.1 mouse_genomes_project X 145743263 145755854 - MGP_CBAJ_P0097043 Morc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0097044.1 MGP_CBAJ_G0035783.1 mouse_genomes_project X 145743377 145755680 - MGP_CBAJ_P0097044 Morc4 protein_coding protein_coding MGP_CBAJ_T0016539.1 MGP_CBAJ_G0014651.1 mouse_genomes_project X 147843046 147843313 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095229.1 MGP_CBAJ_G0035244.1 mouse_genomes_project X 16025042 16064060 + MGP_CBAJ_P0095229 Chst7 protein_coding protein_coding MGP_CBAJ_T0095635.1 MGP_CBAJ_G0035385.1 mouse_genomes_project X 54818649 54831207 - MGP_CBAJ_P0095635 Mmgt1 protein_coding protein_coding MGP_CBAJ_T0009336.1 MGP_CBAJ_G0007476.1 mouse_genomes_project X 174506094 174509534 - Gm15226 lincRNA lincRNA MGP_CBAJ_T0100970.1 MGP_CBAJ_G0039225.1 mouse_genomes_project X 157245538 157245666 - Gm24907 snoRNA snoRNA MGP_CBAJ_T0096277.1 MGP_CBAJ_G0035544.1 mouse_genomes_project X 87171687 87177262 - MGP_CBAJ_P0096277 Mageb4 protein_coding protein_coding MGP_CBAJ_T0102249.1 MGP_CBAJ_G0040278.1 mouse_genomes_project X 75013776 75013914 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0096802.1 MGP_CBAJ_G0035702.1 mouse_genomes_project X 130584818 130623873 - MGP_CBAJ_P0096802 protein_coding protein_coding MGP_CBAJ_T0005495.1 MGP_CBAJ_G0004625.1 mouse_genomes_project X 33331194 33332346 + Gm15008 antisense antisense MGP_CBAJ_T0096106.1 MGP_CBAJ_G0035492.1 mouse_genomes_project X 74356258 74365644 - MGP_CBAJ_P0096106 Fam3a protein_coding protein_coding MGP_CBAJ_T0096107.1 MGP_CBAJ_G0035492.1 mouse_genomes_project X 74356300 74365475 - MGP_CBAJ_P0096107 Fam3a protein_coding protein_coding MGP_CBAJ_T0096108.1 MGP_CBAJ_G0035492.1 mouse_genomes_project X 74356300 74365375 - MGP_CBAJ_P0096108 Fam3a protein_coding protein_coding MGP_CBAJ_T0096109.1 MGP_CBAJ_G0035492.1 mouse_genomes_project X 74356743 74365554 - MGP_CBAJ_P0096109 Fam3a protein_coding protein_coding MGP_CBAJ_T0096110.1 MGP_CBAJ_G0035492.1 mouse_genomes_project X 74356841 74365475 - MGP_CBAJ_P0096110 Fam3a protein_coding protein_coding MGP_CBAJ_T0096111.1 MGP_CBAJ_G0035492.1 mouse_genomes_project X 74357961 74365627 - MGP_CBAJ_P0096111 Fam3a protein_coding protein_coding MGP_CBAJ_T0096112.1 MGP_CBAJ_G0035492.1 mouse_genomes_project X 74358171 74365475 - MGP_CBAJ_P0096112 Fam3a protein_coding nonsense_mediated_decay MGP_CBAJ_T0096113.1 MGP_CBAJ_G0035492.1 mouse_genomes_project X 74358395 74359295 - Fam3a protein_coding retained_intron MGP_CBAJ_T0096114.1 MGP_CBAJ_G0035492.1 mouse_genomes_project X 74358451 74365059 - MGP_CBAJ_P0096114 Fam3a protein_coding protein_coding MGP_CBAJ_T0096115.1 MGP_CBAJ_G0035492.1 mouse_genomes_project X 74358451 74365122 - MGP_CBAJ_P0096115 Fam3a protein_coding nonsense_mediated_decay MGP_CBAJ_T0095727.1 MGP_CBAJ_G0035418.1 mouse_genomes_project X 67980683 67982501 + MGP_CBAJ_P0095727 protein_coding protein_coding MGP_CBAJ_T0095086.1 MGP_CBAJ_G0035194.1 mouse_genomes_project X 3048011 3074069 - MGP_CBAJ_P0095086 Tbc1d25 protein_coding protein_coding MGP_CBAJ_T0095087.1 MGP_CBAJ_G0035194.1 mouse_genomes_project X 3048011 3074069 - MGP_CBAJ_P0095087 Tbc1d25 protein_coding protein_coding MGP_CBAJ_T0095088.1 MGP_CBAJ_G0035194.1 mouse_genomes_project X 3048022 3073846 - Tbc1d25 protein_coding retained_intron MGP_CBAJ_T0095089.1 MGP_CBAJ_G0035194.1 mouse_genomes_project X 3048244 3073721 - MGP_CBAJ_P0095089 Tbc1d25 protein_coding protein_coding MGP_CBAJ_T0016628.1 MGP_CBAJ_G0014740.1 mouse_genomes_project X 166611711 166611975 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099723.1 MGP_CBAJ_G0037978.1 mouse_genomes_project X 170979708 170979828 - Gm26007 snRNA snRNA MGP_CBAJ_T0097000.1 MGP_CBAJ_G0035769.1 mouse_genomes_project X 143207122 144595512 + MGP_CBAJ_P0097000 Il1rapl2 protein_coding protein_coding MGP_CBAJ_T0097001.1 MGP_CBAJ_G0035769.1 mouse_genomes_project X 143207533 144237171 + Il1rapl2 protein_coding retained_intron MGP_CBAJ_T0097002.1 MGP_CBAJ_G0035769.1 mouse_genomes_project X 143298880 144595190 + MGP_CBAJ_P0097002 Il1rapl2 protein_coding protein_coding MGP_CBAJ_T0096898.1 MGP_CBAJ_G0035731.1 mouse_genomes_project X 139995735 139999114 - MGP_CBAJ_P0096898 Armcx2 protein_coding protein_coding MGP_CBAJ_T0096899.1 MGP_CBAJ_G0035731.1 mouse_genomes_project X 139995737 140000809 - MGP_CBAJ_P0096899 Armcx2 protein_coding protein_coding MGP_CBAJ_T0096900.1 MGP_CBAJ_G0035731.1 mouse_genomes_project X 139995737 140000584 - MGP_CBAJ_P0096900 Armcx2 protein_coding protein_coding MGP_CBAJ_T0096901.1 MGP_CBAJ_G0035731.1 mouse_genomes_project X 139995737 140000809 - MGP_CBAJ_P0096901 Armcx2 protein_coding protein_coding MGP_CBAJ_T0096902.1 MGP_CBAJ_G0035731.1 mouse_genomes_project X 139998075 139999100 - Armcx2 protein_coding processed_transcript MGP_CBAJ_T0096903.1 MGP_CBAJ_G0035731.1 mouse_genomes_project X 139998850 139999531 - Armcx2 protein_coding processed_transcript MGP_CBAJ_T0096904.1 MGP_CBAJ_G0035731.1 mouse_genomes_project X 139999475 140000549 - Armcx2 protein_coding processed_transcript MGP_CBAJ_T0098150.1 MGP_CBAJ_G0036423.1 mouse_genomes_project X 175887426 175887536 + Gm24772 rRNA rRNA MGP_CBAJ_T0095287.1 MGP_CBAJ_G0035257.1 mouse_genomes_project X 16986457 16992559 - MGP_CBAJ_P0095287 Cfp protein_coding protein_coding MGP_CBAJ_T0095288.1 MGP_CBAJ_G0035257.1 mouse_genomes_project X 16986654 16988618 - Cfp protein_coding processed_transcript MGP_CBAJ_T0100964.1 MGP_CBAJ_G0039219.1 mouse_genomes_project X 142697586 142697701 - Gm25770 snoRNA snoRNA MGP_CBAJ_T0099653.1 MGP_CBAJ_G0037908.1 mouse_genomes_project X 9849177 9849368 - Gm25202 snRNA snRNA MGP_CBAJ_T0016115.1 MGP_CBAJ_G0014227.1 mouse_genomes_project X 58363310 58364367 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096597.1 MGP_CBAJ_G0035629.1 mouse_genomes_project X 105528920 105535899 + MGP_CBAJ_P0096597 Dmrtc1c1 protein_coding protein_coding MGP_CBAJ_T0096599.1 MGP_CBAJ_G0035629.1 mouse_genomes_project X 105530180 105531874 + MGP_CBAJ_P0096599 Dmrtc1c1 protein_coding protein_coding MGP_CBAJ_T0015959.1 MGP_CBAJ_G0014071.1 mouse_genomes_project X 4004400 4005226 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101228.1 MGP_CBAJ_G0039376.1 mouse_genomes_project X 142589522 142589818 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0016502.1 MGP_CBAJ_G0014614.1 mouse_genomes_project X 142101305 142101934 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096266.1 MGP_CBAJ_G0035540.1 mouse_genomes_project X 86581322 86659166 - MGP_CBAJ_P0096266 Gk protein_coding protein_coding MGP_CBAJ_T0096267.1 MGP_CBAJ_G0035540.1 mouse_genomes_project X 86581322 86659153 - MGP_CBAJ_P0096267 Gk protein_coding protein_coding MGP_CBAJ_T0096268.1 MGP_CBAJ_G0035540.1 mouse_genomes_project X 86581322 86659348 - MGP_CBAJ_P0096268 Gk protein_coding protein_coding MGP_CBAJ_T0096269.1 MGP_CBAJ_G0035540.1 mouse_genomes_project X 86581322 86659182 - MGP_CBAJ_P0096269 Gk protein_coding protein_coding MGP_CBAJ_T0096270.1 MGP_CBAJ_G0035540.1 mouse_genomes_project X 86586381 86591751 - Gk protein_coding processed_transcript MGP_CBAJ_T0096271.1 MGP_CBAJ_G0035540.1 mouse_genomes_project X 86591670 86593734 - Gk protein_coding retained_intron MGP_CBAJ_T0096272.1 MGP_CBAJ_G0035540.1 mouse_genomes_project X 86591967 86616840 - Gk protein_coding retained_intron MGP_CBAJ_T0096273.1 MGP_CBAJ_G0035540.1 mouse_genomes_project X 86638930 86642389 - Gk protein_coding retained_intron MGP_CBAJ_T0016184.1 MGP_CBAJ_G0014296.1 mouse_genomes_project X 74485864 74486308 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016262.1 MGP_CBAJ_G0014374.1 mouse_genomes_project X 91130308 91134789 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016490.1 MGP_CBAJ_G0014602.1 mouse_genomes_project X 140021179 140022085 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011040.1 MGP_CBAJ_G0009178.1 mouse_genomes_project X 66040736 66040813 - Mir871 miRNA miRNA MGP_CBAJ_T0016117.1 MGP_CBAJ_G0014229.1 mouse_genomes_project X 58573600 58574196 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096429.1 MGP_CBAJ_G0035590.1 mouse_genomes_project X 102399513 102744817 + Eda protein_coding retained_intron MGP_CBAJ_T0096430.1 MGP_CBAJ_G0035590.1 mouse_genomes_project X 102399513 102844141 + MGP_CBAJ_P0096430 Eda protein_coding protein_coding MGP_CBAJ_T0096431.1 MGP_CBAJ_G0035590.1 mouse_genomes_project X 102399513 102844141 + MGP_CBAJ_P0096431 Eda protein_coding protein_coding MGP_CBAJ_T0096432.1 MGP_CBAJ_G0035590.1 mouse_genomes_project X 102399513 102844138 + MGP_CBAJ_P0096432 Eda protein_coding protein_coding MGP_CBAJ_T0096433.1 MGP_CBAJ_G0035590.1 mouse_genomes_project X 102399513 102844138 + MGP_CBAJ_P0096433 Eda protein_coding protein_coding MGP_CBAJ_T0096434.1 MGP_CBAJ_G0035590.1 mouse_genomes_project X 102399513 102844139 + MGP_CBAJ_P0096434 Eda protein_coding protein_coding MGP_CBAJ_T0096435.1 MGP_CBAJ_G0035590.1 mouse_genomes_project X 102399513 102844139 + MGP_CBAJ_P0096435 Eda protein_coding protein_coding MGP_CBAJ_T0096436.1 MGP_CBAJ_G0035590.1 mouse_genomes_project X 102399513 102844139 + MGP_CBAJ_P0096436 Eda protein_coding protein_coding MGP_CBAJ_T0096437.1 MGP_CBAJ_G0035590.1 mouse_genomes_project X 102399688 102839191 + MGP_CBAJ_P0096437 Eda protein_coding protein_coding MGP_CBAJ_T0096438.1 MGP_CBAJ_G0035590.1 mouse_genomes_project X 102399688 102840535 + MGP_CBAJ_P0096438 Eda protein_coding protein_coding MGP_CBAJ_T0096439.1 MGP_CBAJ_G0035590.1 mouse_genomes_project X 102830623 102838415 + Eda protein_coding processed_transcript MGP_CBAJ_T0096440.1 MGP_CBAJ_G0035590.1 mouse_genomes_project X 102833082 102837817 + Eda protein_coding processed_transcript MGP_CBAJ_T0005498.1 MGP_CBAJ_G0004628.1 mouse_genomes_project X 49983161 50020298 + Gm14582 antisense antisense MGP_CBAJ_T0095310.1 MGP_CBAJ_G0035265.1 mouse_genomes_project X 17621304 17625925 + MGP_CBAJ_P0095310 Agtr2 protein_coding protein_coding MGP_CBAJ_T0095311.1 MGP_CBAJ_G0035265.1 mouse_genomes_project X 17621482 17623064 + Agtr2 protein_coding processed_transcript MGP_CBAJ_T0097499.1 MGP_CBAJ_G0035890.1 mouse_genomes_project X 171393716 171394907 - MGP_CBAJ_P0097499 Rnf138rt1 protein_coding protein_coding MGP_CBAJ_T0096515.1 MGP_CBAJ_G0035611.1 mouse_genomes_project X 103906810 103916062 + MGP_CBAJ_P0096515 Gjb1 protein_coding protein_coding MGP_CBAJ_T0096516.1 MGP_CBAJ_G0035611.1 mouse_genomes_project X 103907705 103916062 + MGP_CBAJ_P0096516 Gjb1 protein_coding protein_coding MGP_CBAJ_T0096517.1 MGP_CBAJ_G0035611.1 mouse_genomes_project X 103914168 103916062 + MGP_CBAJ_P0096517 Gjb1 protein_coding protein_coding MGP_CBAJ_T0099718.1 MGP_CBAJ_G0037973.1 mouse_genomes_project X 164043311 164043475 + Gm22666 snRNA snRNA MGP_CBAJ_T0100945.1 MGP_CBAJ_G0039200.1 mouse_genomes_project X 83198371 83198503 - Gm24470 snoRNA snoRNA MGP_CBAJ_T0096867.1 MGP_CBAJ_G0035723.1 mouse_genomes_project X 139672249 139676288 - MGP_CBAJ_P0096867 Gm9797 protein_coding protein_coding MGP_CBAJ_T0005516.1 MGP_CBAJ_G0004644.1 mouse_genomes_project X 98451391 98455102 + F630028O10Rik antisense antisense MGP_CBAJ_T0005517.1 MGP_CBAJ_G0004644.1 mouse_genomes_project X 98451431 98455102 + F630028O10Rik antisense antisense MGP_CBAJ_T0009266.1 MGP_CBAJ_G0007430.1 mouse_genomes_project X 17418415 17443015 - Gm6938 lincRNA lincRNA MGP_CBAJ_T0009318.1 MGP_CBAJ_G0007465.1 mouse_genomes_project X 138722545 138742497 + Gm26851 lincRNA lincRNA MGP_CBAJ_T0095393.1 MGP_CBAJ_G0035304.1 mouse_genomes_project X 34512842 34517738 - protein_coding unprocessed_pseudogene MGP_CBAJ_T0095394.1 MGP_CBAJ_G0035304.1 mouse_genomes_project X 34513545 34517738 - MGP_CBAJ_P0095394 protein_coding protein_coding MGP_CBAJ_T0099695.1 MGP_CBAJ_G0037950.1 mouse_genomes_project X 109735755 109735917 - Gm24622 snRNA snRNA MGP_CBAJ_T0102237.1 MGP_CBAJ_G0040266.1 mouse_genomes_project X 34430914 34431924 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016165.1 MGP_CBAJ_G0014277.1 mouse_genomes_project X 68303170 68304026 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016480.1 MGP_CBAJ_G0014592.1 mouse_genomes_project X 137003386 137004329 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100944.1 MGP_CBAJ_G0039199.1 mouse_genomes_project X 82914275 82914412 - Gm24706 snoRNA snoRNA MGP_CBAJ_T0005494.1 MGP_CBAJ_G0004624.1 mouse_genomes_project X 33224581 33227001 + Gm14549 antisense antisense MGP_CBAJ_T0016429.1 MGP_CBAJ_G0014541.1 mouse_genomes_project X 119525790 119526644 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011100.1 MGP_CBAJ_G0009238.1 mouse_genomes_project X 164200512 164200611 + Gm23798 miRNA miRNA MGP_CBAJ_T0100952.1 MGP_CBAJ_G0039207.1 mouse_genomes_project X 117473676 117473800 - Gm23985 snoRNA snoRNA MGP_CBAJ_T0016017.1 MGP_CBAJ_G0014129.1 mouse_genomes_project X 18380991 18381345 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015957.1 MGP_CBAJ_G0014069.1 mouse_genomes_project X 3996192 3997712 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010994.1 MGP_CBAJ_G0009132.1 mouse_genomes_project X 11354216 11354280 + Gm22464 miRNA miRNA MGP_CBAJ_T0016390.1 MGP_CBAJ_G0014502.1 mouse_genomes_project X 111330037 111334864 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096391.1 MGP_CBAJ_G0035580.1 mouse_genomes_project X 98903433 98906501 + Gpr165 protein_coding retained_intron MGP_CBAJ_T0096392.1 MGP_CBAJ_G0035580.1 mouse_genomes_project X 98903484 98909369 + MGP_CBAJ_P0096392 Gpr165 protein_coding protein_coding MGP_CBAJ_T0096393.1 MGP_CBAJ_G0035580.1 mouse_genomes_project X 98903505 98905766 + Gpr165 protein_coding retained_intron MGP_CBAJ_T0096394.1 MGP_CBAJ_G0035580.1 mouse_genomes_project X 98904177 98909263 + Gpr165 protein_coding retained_intron MGP_CBAJ_T0010997.1 MGP_CBAJ_G0009135.1 mouse_genomes_project X 16872248 16872326 - Gm24824 miRNA miRNA MGP_CBAJ_T0095389.1 MGP_CBAJ_G0035301.1 mouse_genomes_project X 34268599 34272634 + MGP_CBAJ_P0095389 Rhox5 protein_coding protein_coding MGP_CBAJ_T0095390.1 MGP_CBAJ_G0035301.1 mouse_genomes_project X 34268608 34272522 + MGP_CBAJ_P0095390 Rhox5 protein_coding protein_coding MGP_CBAJ_T0095596.1 MGP_CBAJ_G0035362.1 mouse_genomes_project X 49707923 49828918 - MGP_CBAJ_P0095596 Gpc4 protein_coding protein_coding MGP_CBAJ_T0095151.1 MGP_CBAJ_G0035219.1 mouse_genomes_project X 5479858 5555078 + MGP_CBAJ_P0095151 Otc protein_coding protein_coding MGP_CBAJ_T0095152.1 MGP_CBAJ_G0035219.1 mouse_genomes_project X 5479920 5550586 + MGP_CBAJ_P0095152 Otc protein_coding protein_coding MGP_CBAJ_T0095687.1 MGP_CBAJ_G0035399.1 mouse_genomes_project X 57319390 57331106 + MGP_CBAJ_P0095687 4930550L24Rik protein_coding protein_coding MGP_CBAJ_T0095688.1 MGP_CBAJ_G0035399.1 mouse_genomes_project X 57321493 57331106 + MGP_CBAJ_P0095688 4930550L24Rik protein_coding protein_coding MGP_CBAJ_T0095622.1 MGP_CBAJ_G0035378.1 mouse_genomes_project X 54352839 54376105 - MGP_CBAJ_P0095622 Gm773 protein_coding protein_coding MGP_CBAJ_T0096924.1 MGP_CBAJ_G0035739.1 mouse_genomes_project X 140989909 141033322 - MGP_CBAJ_P0096924 Tcp11x2 protein_coding protein_coding MGP_CBAJ_T0096367.1 MGP_CBAJ_G0035574.1 mouse_genomes_project X 97805598 97806440 - MGP_CBAJ_P0096367 Gm5941 protein_coding protein_coding MGP_CBAJ_T0094914.1 MGP_CBAJ_G0035157.1 mouse_genomes_project X 1148122 1404498 + MGP_CBAJ_P0094914 Shroom4 protein_coding protein_coding MGP_CBAJ_T0094915.1 MGP_CBAJ_G0035157.1 mouse_genomes_project X 1168103 1350281 + MGP_CBAJ_P0094915 Shroom4 protein_coding protein_coding MGP_CBAJ_T0016029.1 MGP_CBAJ_G0014141.1 mouse_genomes_project X 33081862 33082659 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016163.1 MGP_CBAJ_G0014275.1 mouse_genomes_project X 67980683 67981898 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097399.1 MGP_CBAJ_G0035868.1 mouse_genomes_project X 166565845 166570226 + Eif1ax protein_coding retained_intron MGP_CBAJ_T0097400.1 MGP_CBAJ_G0035868.1 mouse_genomes_project X 166565845 166583738 + MGP_CBAJ_P0097400 Eif1ax protein_coding protein_coding MGP_CBAJ_T0097603.1 MGP_CBAJ_G0035918.1 mouse_genomes_project X 175422219 176135222 - MGP_CBAJ_P0097603 Frmpd4 protein_coding protein_coding MGP_CBAJ_T0097604.1 MGP_CBAJ_G0035918.1 mouse_genomes_project X 175422219 176612967 - MGP_CBAJ_P0097604 Frmpd4 protein_coding protein_coding MGP_CBAJ_T0097605.1 MGP_CBAJ_G0035918.1 mouse_genomes_project X 175422223 175882670 - MGP_CBAJ_P0097605 Frmpd4 protein_coding protein_coding MGP_CBAJ_T0097606.1 MGP_CBAJ_G0035918.1 mouse_genomes_project X 175426208 175704699 - MGP_CBAJ_P0097606 Frmpd4 protein_coding protein_coding MGP_CBAJ_T0094910.1 MGP_CBAJ_G0035154.1 mouse_genomes_project X 793585 795786 - MGP_CBAJ_P0094910 AU022751 protein_coding protein_coding MGP_CBAJ_T0094911.1 MGP_CBAJ_G0035154.1 mouse_genomes_project X 793585 795786 - MGP_CBAJ_P0094911 AU022751 protein_coding protein_coding MGP_CBAJ_T0016531.1 MGP_CBAJ_G0014643.1 mouse_genomes_project X 147272617 147273399 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095722.1 MGP_CBAJ_G0035414.1 mouse_genomes_project X 65527367 65528231 - MGP_CBAJ_P0095722 4930447F04Rik protein_coding protein_coding MGP_CBAJ_T0016611.1 MGP_CBAJ_G0014723.1 mouse_genomes_project X 163616975 163617444 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100975.1 MGP_CBAJ_G0039230.1 mouse_genomes_project X 164466677 164466813 + Gm24281 snoRNA snoRNA MGP_CBAJ_T0100923.1 MGP_CBAJ_G0039178.1 mouse_genomes_project X 8676509 8676603 + Snord83b snoRNA snoRNA MGP_CBAJ_T0095456.1 MGP_CBAJ_G0035321.1 mouse_genomes_project X 38940232 38953257 + Xiap protein_coding processed_transcript MGP_CBAJ_T0095457.1 MGP_CBAJ_G0035321.1 mouse_genomes_project X 38948388 38994403 + MGP_CBAJ_P0095457 Xiap protein_coding protein_coding MGP_CBAJ_T0095458.1 MGP_CBAJ_G0035321.1 mouse_genomes_project X 38948433 38976798 + MGP_CBAJ_P0095458 Xiap protein_coding protein_coding MGP_CBAJ_T0095459.1 MGP_CBAJ_G0035321.1 mouse_genomes_project X 38948470 38989566 + Xiap protein_coding processed_transcript MGP_CBAJ_T0095460.1 MGP_CBAJ_G0035321.1 mouse_genomes_project X 38948977 38994403 + MGP_CBAJ_P0095460 Xiap protein_coding protein_coding MGP_CBAJ_T0095461.1 MGP_CBAJ_G0035321.1 mouse_genomes_project X 38948989 38953257 + Xiap protein_coding processed_transcript MGP_CBAJ_T0095462.1 MGP_CBAJ_G0035321.1 mouse_genomes_project X 38949334 38994403 + Xiap protein_coding processed_transcript MGP_CBAJ_T0095463.1 MGP_CBAJ_G0035321.1 mouse_genomes_project X 38951944 38994403 + MGP_CBAJ_P0095463 Xiap protein_coding protein_coding MGP_CBAJ_T0095464.1 MGP_CBAJ_G0035321.1 mouse_genomes_project X 38975969 38994403 + MGP_CBAJ_P0095464 Xiap protein_coding protein_coding MGP_CBAJ_T0097303.1 MGP_CBAJ_G0035837.1 mouse_genomes_project X 158919049 158924623 - Tspyl2 protein_coding retained_intron MGP_CBAJ_T0097304.1 MGP_CBAJ_G0035837.1 mouse_genomes_project X 158919049 158924623 - Tspyl2 protein_coding retained_intron MGP_CBAJ_T0097305.1 MGP_CBAJ_G0035837.1 mouse_genomes_project X 158919052 158924623 - MGP_CBAJ_P0097305 Tspyl2 protein_coding protein_coding MGP_CBAJ_T0097306.1 MGP_CBAJ_G0035837.1 mouse_genomes_project X 158921498 158924042 - MGP_CBAJ_P0097306 Tspyl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0097307.1 MGP_CBAJ_G0035837.1 mouse_genomes_project X 158922462 158923999 - Tspyl2 protein_coding retained_intron MGP_CBAJ_T0016447.1 MGP_CBAJ_G0014559.1 mouse_genomes_project X 124257880 124258710 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016152.1 MGP_CBAJ_G0014264.1 mouse_genomes_project X 66218253 66218777 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011043.1 MGP_CBAJ_G0009181.1 mouse_genomes_project X 66058732 66058813 - Mir465c-1 miRNA miRNA MGP_CBAJ_T0102276.1 MGP_CBAJ_G0040305.1 mouse_genomes_project X 158665301 158669044 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0011015.1 MGP_CBAJ_G0009153.1 mouse_genomes_project X 50452192 50452275 - Mir18b miRNA miRNA MGP_CBAJ_T0095814.1 MGP_CBAJ_G0035443.1 mouse_genomes_project X 72526948 72544374 + MGP_CBAJ_P0095814 Gabrq protein_coding protein_coding MGP_CBAJ_T0095815.1 MGP_CBAJ_G0035443.1 mouse_genomes_project X 72527206 72540315 + MGP_CBAJ_P0095815 Gabrq protein_coding protein_coding MGP_CBAJ_T0016008.1 MGP_CBAJ_G0014120.1 mouse_genomes_project X 16382827 16383899 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016068.1 MGP_CBAJ_G0014180.1 mouse_genomes_project X 43384376 43385909 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016604.1 MGP_CBAJ_G0014716.1 mouse_genomes_project X 161982443 161982803 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011057.1 MGP_CBAJ_G0009195.1 mouse_genomes_project X 74225859 74225938 - Mir7091 miRNA miRNA MGP_CBAJ_T0015976.1 MGP_CBAJ_G0014088.1 mouse_genomes_project X 8060281 8060641 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095741.1 MGP_CBAJ_G0035420.1 mouse_genomes_project X 68122174 68174116 + MGP_CBAJ_P0095741 Fmr1nb protein_coding protein_coding MGP_CBAJ_T0095742.1 MGP_CBAJ_G0035420.1 mouse_genomes_project X 68122216 68174116 + MGP_CBAJ_P0095742 Fmr1nb protein_coding protein_coding MGP_CBAJ_T0095743.1 MGP_CBAJ_G0035420.1 mouse_genomes_project X 68122269 68174116 + MGP_CBAJ_P0095743 Fmr1nb protein_coding protein_coding MGP_CBAJ_T0009321.1 MGP_CBAJ_G0007468.1 mouse_genomes_project X 150211091 150223669 + lincRNA lincRNA MGP_CBAJ_T0096630.1 MGP_CBAJ_G0035647.1 mouse_genomes_project X 108103020 108106570 + MGP_CBAJ_P0096630 Magee1 protein_coding protein_coding MGP_CBAJ_T0096211.1 MGP_CBAJ_G0035521.1 mouse_genomes_project X 77676368 77839832 + MGP_CBAJ_P0096211 Tbl1x protein_coding protein_coding MGP_CBAJ_T0096212.1 MGP_CBAJ_G0035521.1 mouse_genomes_project X 77676569 77836593 + Tbl1x protein_coding retained_intron MGP_CBAJ_T0099663.1 MGP_CBAJ_G0037918.1 mouse_genomes_project X 32808804 32808902 - Gm22364 snRNA snRNA MGP_CBAJ_T0016397.1 MGP_CBAJ_G0014509.1 mouse_genomes_project X 113992923 113994067 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016432.1 MGP_CBAJ_G0014544.1 mouse_genomes_project X 120761677 120762065 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097089.1 MGP_CBAJ_G0035798.1 mouse_genomes_project X 147842376 147843411 - MGP_CBAJ_P0097089 protein_coding protein_coding MGP_CBAJ_T0095241.1 MGP_CBAJ_G0035247.1 mouse_genomes_project X 16432088 16539992 + MGP_CBAJ_P0095241 Jade3 protein_coding protein_coding MGP_CBAJ_T0095242.1 MGP_CBAJ_G0035247.1 mouse_genomes_project X 16432188 16512612 + Jade3 protein_coding retained_intron MGP_CBAJ_T0095243.1 MGP_CBAJ_G0035247.1 mouse_genomes_project X 16437535 16537949 + MGP_CBAJ_P0095243 Jade3 protein_coding unknown_likely_coding MGP_CBAJ_T0095244.1 MGP_CBAJ_G0035247.1 mouse_genomes_project X 16467930 16537949 + MGP_CBAJ_P0095244 Jade3 protein_coding protein_coding MGP_CBAJ_T0096080.1 MGP_CBAJ_G0035487.1 mouse_genomes_project X 74273516 74280376 + MGP_CBAJ_P0096080 Fam50a protein_coding protein_coding MGP_CBAJ_T0096081.1 MGP_CBAJ_G0035487.1 mouse_genomes_project X 74273609 74280361 + Fam50a protein_coding retained_intron MGP_CBAJ_T0096082.1 MGP_CBAJ_G0035487.1 mouse_genomes_project X 74277717 74278215 + Fam50a protein_coding retained_intron MGP_CBAJ_T0016026.1 MGP_CBAJ_G0014138.1 mouse_genomes_project X 32586511 32587117 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097120.1 MGP_CBAJ_G0035809.1 mouse_genomes_project X 149882214 149907263 - MGP_CBAJ_P0097120 Capn6 protein_coding protein_coding MGP_CBAJ_T0097121.1 MGP_CBAJ_G0035809.1 mouse_genomes_project X 149895912 149907181 - Capn6 protein_coding retained_intron MGP_CBAJ_T0016169.1 MGP_CBAJ_G0014281.1 mouse_genomes_project X 69953036 69953960 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100957.1 MGP_CBAJ_G0039212.1 mouse_genomes_project X 131349747 131349870 + Gm23586 snoRNA snoRNA MGP_CBAJ_T0016059.1 MGP_CBAJ_G0014171.1 mouse_genomes_project X 40751868 40752586 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099717.1 MGP_CBAJ_G0037972.1 mouse_genomes_project X 161491117 161491225 + Gm22359 snRNA snRNA MGP_CBAJ_T0016214.1 MGP_CBAJ_G0014326.1 mouse_genomes_project X 78916670 78917625 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016551.1 MGP_CBAJ_G0014663.1 mouse_genomes_project X 148831091 148831554 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095534.1 MGP_CBAJ_G0035342.1 mouse_genomes_project X 45993406 46048770 - MGP_CBAJ_P0095534 Zfp280c protein_coding protein_coding MGP_CBAJ_T0095535.1 MGP_CBAJ_G0035342.1 mouse_genomes_project X 45993406 46048691 - MGP_CBAJ_P0095535 Zfp280c protein_coding protein_coding MGP_CBAJ_T0095536.1 MGP_CBAJ_G0035342.1 mouse_genomes_project X 45993406 46046458 - MGP_CBAJ_P0095536 Zfp280c protein_coding protein_coding MGP_CBAJ_T0095537.1 MGP_CBAJ_G0035342.1 mouse_genomes_project X 45993407 46046086 - MGP_CBAJ_P0095537 Zfp280c protein_coding protein_coding MGP_CBAJ_T0095538.1 MGP_CBAJ_G0035342.1 mouse_genomes_project X 45994538 45995485 - Zfp280c protein_coding retained_intron MGP_CBAJ_T0095539.1 MGP_CBAJ_G0035342.1 mouse_genomes_project X 46032748 46048709 - Zfp280c protein_coding processed_transcript MGP_CBAJ_T0095540.1 MGP_CBAJ_G0035342.1 mouse_genomes_project X 46040421 46048822 - Zfp280c protein_coding processed_transcript MGP_CBAJ_T0016011.1 MGP_CBAJ_G0014123.1 mouse_genomes_project X 16548111 16549438 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016557.1 MGP_CBAJ_G0014669.1 mouse_genomes_project X 150336273 150343791 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095184.1 MGP_CBAJ_G0035227.1 mouse_genomes_project X 8770683 8784407 + MGP_CBAJ_P0095184 Ddx3x protein_coding protein_coding MGP_CBAJ_T0095185.1 MGP_CBAJ_G0035227.1 mouse_genomes_project X 8770688 8784937 + Ddx3x protein_coding processed_transcript MGP_CBAJ_T0095186.1 MGP_CBAJ_G0035227.1 mouse_genomes_project X 8770698 8777545 + Ddx3x protein_coding retained_intron MGP_CBAJ_T0095187.1 MGP_CBAJ_G0035227.1 mouse_genomes_project X 8776956 8778525 + Ddx3x protein_coding retained_intron MGP_CBAJ_T0095188.1 MGP_CBAJ_G0035227.1 mouse_genomes_project X 8777457 8779588 + Ddx3x protein_coding retained_intron MGP_CBAJ_T0097523.1 MGP_CBAJ_G0035897.1 mouse_genomes_project X 171868790 171936156 - MGP_CBAJ_P0097523 Bmx protein_coding protein_coding MGP_CBAJ_T0097524.1 MGP_CBAJ_G0035897.1 mouse_genomes_project X 171869303 171928344 - MGP_CBAJ_P0097524 Bmx protein_coding protein_coding MGP_CBAJ_T0016050.1 MGP_CBAJ_G0014162.1 mouse_genomes_project X 38588321 38589628 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096815.1 MGP_CBAJ_G0035709.1 mouse_genomes_project X 138611288 138723752 - MGP_CBAJ_P0096815 Pcdh19 protein_coding protein_coding MGP_CBAJ_T0096816.1 MGP_CBAJ_G0035709.1 mouse_genomes_project X 138611303 138722030 - MGP_CBAJ_P0096816 Pcdh19 protein_coding protein_coding MGP_CBAJ_T0096817.1 MGP_CBAJ_G0035709.1 mouse_genomes_project X 138611307 138720659 - MGP_CBAJ_P0096817 Pcdh19 protein_coding protein_coding MGP_CBAJ_T0096818.1 MGP_CBAJ_G0035709.1 mouse_genomes_project X 138611308 138616440 - MGP_CBAJ_P0096818 Pcdh19 protein_coding nonsense_mediated_decay MGP_CBAJ_T0096819.1 MGP_CBAJ_G0035709.1 mouse_genomes_project X 138714010 138719757 - Pcdh19 protein_coding processed_transcript MGP_CBAJ_T0096234.1 MGP_CBAJ_G0035532.1 mouse_genomes_project X 79574349 79853274 - MGP_CBAJ_P0096234 Gm7173 protein_coding protein_coding MGP_CBAJ_T0096235.1 MGP_CBAJ_G0035532.1 mouse_genomes_project X 79635793 79672388 - MGP_CBAJ_P0096235 Gm7173 protein_coding protein_coding MGP_CBAJ_T0096236.1 MGP_CBAJ_G0035532.1 mouse_genomes_project X 79661779 79672497 - Gm7173 protein_coding processed_transcript MGP_CBAJ_T0096237.1 MGP_CBAJ_G0035532.1 mouse_genomes_project X 79721386 79756470 - MGP_CBAJ_P0096237 Gm7173 protein_coding protein_coding MGP_CBAJ_T0096238.1 MGP_CBAJ_G0035532.1 mouse_genomes_project X 79815062 79853274 - MGP_CBAJ_P0096238 Gm7173 protein_coding protein_coding MGP_CBAJ_T0016041.1 MGP_CBAJ_G0014153.1 mouse_genomes_project X 36718324 36718753 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011648.1 MGP_CBAJ_G0009786.1 mouse_genomes_project X 138359954 138360290 - Gm22552 misc_RNA misc_RNA MGP_CBAJ_T0097435.1 MGP_CBAJ_G0035875.1 mouse_genomes_project X 167792622 167821793 + MGP_CBAJ_P0097435 Phka2 protein_coding protein_coding MGP_CBAJ_T0097436.1 MGP_CBAJ_G0035875.1 mouse_genomes_project X 167792884 167823829 + Phka2 protein_coding retained_intron MGP_CBAJ_T0097437.1 MGP_CBAJ_G0035875.1 mouse_genomes_project X 167792884 167889476 + MGP_CBAJ_P0097437 Phka2 protein_coding protein_coding MGP_CBAJ_T0097438.1 MGP_CBAJ_G0035875.1 mouse_genomes_project X 167792915 167850454 + MGP_CBAJ_P0097438 Phka2 protein_coding protein_coding MGP_CBAJ_T0097439.1 MGP_CBAJ_G0035875.1 mouse_genomes_project X 167793262 167882088 + MGP_CBAJ_P0097439 Phka2 protein_coding protein_coding MGP_CBAJ_T0097440.1 MGP_CBAJ_G0035875.1 mouse_genomes_project X 167817364 167832990 + Phka2 protein_coding processed_transcript MGP_CBAJ_T0097441.1 MGP_CBAJ_G0035875.1 mouse_genomes_project X 167817374 167832985 + Phka2 protein_coding processed_transcript MGP_CBAJ_T0097442.1 MGP_CBAJ_G0035875.1 mouse_genomes_project X 167824910 167882120 + Phka2 protein_coding processed_transcript MGP_CBAJ_T0097443.1 MGP_CBAJ_G0035875.1 mouse_genomes_project X 167849285 167854248 + Phka2 protein_coding processed_transcript MGP_CBAJ_T0096783.1 MGP_CBAJ_G0035692.1 mouse_genomes_project X 118552827 118555401 + MGP_CBAJ_P0096783 Ube2dnl1 protein_coding protein_coding MGP_CBAJ_T0016496.1 MGP_CBAJ_G0014608.1 mouse_genomes_project X 141095091 141096912 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097425.1 MGP_CBAJ_G0035872.1 mouse_genomes_project X 167236280 167379734 + MGP_CBAJ_P0097425 Map3k15 protein_coding protein_coding MGP_CBAJ_T0016056.1 MGP_CBAJ_G0014168.1 mouse_genomes_project X 40401922 40402580 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005513.1 MGP_CBAJ_G0004641.1 mouse_genomes_project X 86623577 86628482 + Gm14764 antisense antisense MGP_CBAJ_T0098505.1 MGP_CBAJ_G0036760.1 mouse_genomes_project X 738466 804640 - Gm26618 sense_overlapping sense_overlapping MGP_CBAJ_T0097278.1 MGP_CBAJ_G0035832.1 mouse_genomes_project X 158548982 158551595 + MGP_CBAJ_P0097278 Hsd17b10 protein_coding protein_coding MGP_CBAJ_T0097279.1 MGP_CBAJ_G0035832.1 mouse_genomes_project X 158548982 158551595 + MGP_CBAJ_P0097279 Hsd17b10 protein_coding protein_coding MGP_CBAJ_T0097280.1 MGP_CBAJ_G0035832.1 mouse_genomes_project X 158549286 158551595 + Hsd17b10 protein_coding processed_transcript MGP_CBAJ_T0097281.1 MGP_CBAJ_G0035832.1 mouse_genomes_project X 158550549 158551595 + Hsd17b10 protein_coding retained_intron MGP_CBAJ_T0097096.1 MGP_CBAJ_G0035802.1 mouse_genomes_project X 148307233 148308776 - MGP_CBAJ_P0097096 Kcne1l protein_coding protein_coding MGP_CBAJ_T0016230.1 MGP_CBAJ_G0014342.1 mouse_genomes_project X 83276363 83277332 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095319.1 MGP_CBAJ_G0035269.1 mouse_genomes_project X 19899328 19961793 + Wdr44 protein_coding retained_intron MGP_CBAJ_T0095320.1 MGP_CBAJ_G0035269.1 mouse_genomes_project X 19899410 19967123 + MGP_CBAJ_P0095320 Wdr44 protein_coding nonsense_mediated_decay MGP_CBAJ_T0095321.1 MGP_CBAJ_G0035269.1 mouse_genomes_project X 19899714 20017928 + MGP_CBAJ_P0095321 Wdr44 protein_coding protein_coding MGP_CBAJ_T0095322.1 MGP_CBAJ_G0035269.1 mouse_genomes_project X 19988841 19993591 + Wdr44 protein_coding retained_intron MGP_CBAJ_T0016603.1 MGP_CBAJ_G0014715.1 mouse_genomes_project X 161547297 161565713 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016576.1 MGP_CBAJ_G0014688.1 mouse_genomes_project X 152894504 152894981 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016526.1 MGP_CBAJ_G0014638.1 mouse_genomes_project X 146402275 146403104 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016039.1 MGP_CBAJ_G0014151.1 mouse_genomes_project X 36441870 36442261 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096220.1 MGP_CBAJ_G0035527.1 mouse_genomes_project X 78464447 78469895 - MGP_CBAJ_P0096220 protein_coding protein_coding MGP_CBAJ_T0095345.1 MGP_CBAJ_G0035279.1 mouse_genomes_project X 33021172 33059066 - MGP_CBAJ_P0095345 Akap17b protein_coding protein_coding MGP_CBAJ_T0095346.1 MGP_CBAJ_G0035279.1 mouse_genomes_project X 33024737 33058767 - MGP_CBAJ_P0095346 Akap17b protein_coding protein_coding MGP_CBAJ_T0095397.1 MGP_CBAJ_G0035307.1 mouse_genomes_project X 34623419 34639305 - MGP_CBAJ_P0095397 Rhox12 protein_coding protein_coding MGP_CBAJ_T0095398.1 MGP_CBAJ_G0035307.1 mouse_genomes_project X 34623520 34636932 - MGP_CBAJ_P0095398 Rhox12 protein_coding protein_coding MGP_CBAJ_T0095399.1 MGP_CBAJ_G0035307.1 mouse_genomes_project X 34624919 34639185 - MGP_CBAJ_P0095399 Rhox12 protein_coding protein_coding MGP_CBAJ_T0099677.1 MGP_CBAJ_G0037932.1 mouse_genomes_project X 60685574 60685681 + Gm25412 snRNA snRNA MGP_CBAJ_T0011041.1 MGP_CBAJ_G0009179.1 mouse_genomes_project X 66046358 66046433 - Mir470 miRNA miRNA MGP_CBAJ_T0096874.1 MGP_CBAJ_G0035726.1 mouse_genomes_project X 139723454 139727919 + MGP_CBAJ_P0096874 Rpl36a protein_coding protein_coding MGP_CBAJ_T0096875.1 MGP_CBAJ_G0035726.1 mouse_genomes_project X 139723489 139727925 + Rpl36a protein_coding retained_intron MGP_CBAJ_T0096876.1 MGP_CBAJ_G0035726.1 mouse_genomes_project X 139723490 139727925 + MGP_CBAJ_P0096876 Rpl36a protein_coding nonsense_mediated_decay MGP_CBAJ_T0096877.1 MGP_CBAJ_G0035726.1 mouse_genomes_project X 139723501 139727896 + Rpl36a protein_coding retained_intron MGP_CBAJ_T0096878.1 MGP_CBAJ_G0035726.1 mouse_genomes_project X 139723517 139725758 + MGP_CBAJ_P0096878 Rpl36a protein_coding unknown_likely_coding MGP_CBAJ_T0096879.1 MGP_CBAJ_G0035726.1 mouse_genomes_project X 139723890 139726879 + Rpl36a protein_coding retained_intron MGP_CBAJ_T0096880.1 MGP_CBAJ_G0035726.1 mouse_genomes_project X 139726943 139727859 + Rpl36a protein_coding retained_intron MGP_CBAJ_T0096805.1 MGP_CBAJ_G0035705.1 mouse_genomes_project X 131808614 131810220 + MGP_CBAJ_P0096805 4921511C20Rik protein_coding protein_coding MGP_CBAJ_T0016067.1 MGP_CBAJ_G0014179.1 mouse_genomes_project X 43022420 43022655 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096178.1 MGP_CBAJ_G0035509.1 mouse_genomes_project X 75469532 75484971 + MGP_CBAJ_P0096178 Fundc2 protein_coding protein_coding MGP_CBAJ_T0096179.1 MGP_CBAJ_G0035509.1 mouse_genomes_project X 75469560 75475857 + Fundc2 protein_coding retained_intron MGP_CBAJ_T0096180.1 MGP_CBAJ_G0035509.1 mouse_genomes_project X 75475483 75482840 + Fundc2 protein_coding processed_transcript MGP_CBAJ_T0095285.1 MGP_CBAJ_G0035256.1 mouse_genomes_project X 16924751 16929319 + MGP_CBAJ_P0095285 Timp1 protein_coding protein_coding MGP_CBAJ_T0095286.1 MGP_CBAJ_G0035256.1 mouse_genomes_project X 16924806 16929321 + MGP_CBAJ_P0095286 Timp1 protein_coding protein_coding MGP_CBAJ_T0016268.1 MGP_CBAJ_G0014380.1 mouse_genomes_project X 92783968 92784919 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011633.1 MGP_CBAJ_G0009771.1 mouse_genomes_project X 83431806 83431909 - Gm23671 misc_RNA misc_RNA MGP_CBAJ_T0096602.1 MGP_CBAJ_G0035631.1 mouse_genomes_project X 105663880 105667537 - MGP_CBAJ_P0096602 Dmrtc1a protein_coding protein_coding MGP_CBAJ_T0096603.1 MGP_CBAJ_G0035631.1 mouse_genomes_project X 105663886 105667137 - MGP_CBAJ_P0096603 Dmrtc1a protein_coding protein_coding MGP_CBAJ_T0096604.1 MGP_CBAJ_G0035631.1 mouse_genomes_project X 105663886 105667226 - MGP_CBAJ_P0096604 Dmrtc1a protein_coding protein_coding MGP_CBAJ_T0096605.1 MGP_CBAJ_G0035631.1 mouse_genomes_project X 105664476 105669034 - MGP_CBAJ_P0096605 Dmrtc1a protein_coding protein_coding MGP_CBAJ_T0011083.1 MGP_CBAJ_G0009221.1 mouse_genomes_project X 141617184 141617300 + Mir6383 miRNA miRNA MGP_CBAJ_T0100947.1 MGP_CBAJ_G0039202.1 mouse_genomes_project X 95033975 95034108 + Gm23454 snoRNA snoRNA MGP_CBAJ_T0095032.1 MGP_CBAJ_G0035180.1 mouse_genomes_project X 2713185 2729476 + MGP_CBAJ_P0095032 Slc35a2 protein_coding protein_coding MGP_CBAJ_T0095033.1 MGP_CBAJ_G0035180.1 mouse_genomes_project X 2713388 2729448 + MGP_CBAJ_P0095033 Slc35a2 protein_coding protein_coding MGP_CBAJ_T0095034.1 MGP_CBAJ_G0035180.1 mouse_genomes_project X 2713467 2729011 + MGP_CBAJ_P0095034 Slc35a2 protein_coding protein_coding MGP_CBAJ_T0095035.1 MGP_CBAJ_G0035180.1 mouse_genomes_project X 2713522 2729446 + MGP_CBAJ_P0095035 Slc35a2 protein_coding protein_coding MGP_CBAJ_T0095036.1 MGP_CBAJ_G0035180.1 mouse_genomes_project X 2714980 2729444 + MGP_CBAJ_P0095036 Slc35a2 protein_coding protein_coding MGP_CBAJ_T0095037.1 MGP_CBAJ_G0035180.1 mouse_genomes_project X 2728004 2729448 + Slc35a2 protein_coding processed_transcript MGP_CBAJ_T0016122.1 MGP_CBAJ_G0014234.1 mouse_genomes_project X 59313629 59314689 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0094986.1 MGP_CBAJ_G0035174.1 mouse_genomes_project X 2554014 2563638 - MGP_CBAJ_P0094986 Ccdc120 protein_coding protein_coding MGP_CBAJ_T0094987.1 MGP_CBAJ_G0035174.1 mouse_genomes_project X 2560259 2562507 - MGP_CBAJ_P0094987 Ccdc120 protein_coding protein_coding MGP_CBAJ_T0094988.1 MGP_CBAJ_G0035174.1 mouse_genomes_project X 2560516 2563605 - Ccdc120 protein_coding processed_transcript MGP_CBAJ_T0094989.1 MGP_CBAJ_G0035174.1 mouse_genomes_project X 2560530 2562528 - Ccdc120 protein_coding processed_transcript MGP_CBAJ_T0094990.1 MGP_CBAJ_G0035174.1 mouse_genomes_project X 2560541 2563621 - Ccdc120 protein_coding processed_transcript MGP_CBAJ_T0094991.1 MGP_CBAJ_G0035174.1 mouse_genomes_project X 2560668 2562504 - Ccdc120 protein_coding processed_transcript MGP_CBAJ_T0094992.1 MGP_CBAJ_G0035174.1 mouse_genomes_project X 2560758 2575456 - Ccdc120 protein_coding processed_transcript MGP_CBAJ_T0094993.1 MGP_CBAJ_G0035174.1 mouse_genomes_project X 2560811 2575448 - Ccdc120 protein_coding processed_transcript MGP_CBAJ_T0095829.1 MGP_CBAJ_G0035450.1 mouse_genomes_project X 73009761 73012266 + MGP_CBAJ_P0095829 F8a protein_coding protein_coding MGP_CBAJ_T0096781.1 MGP_CBAJ_G0035691.1 mouse_genomes_project X 118102054 118186150 + MGP_CBAJ_P0096781 Klhl4 protein_coding protein_coding MGP_CBAJ_T0096782.1 MGP_CBAJ_G0035691.1 mouse_genomes_project X 118102234 118185823 + MGP_CBAJ_P0096782 Klhl4 protein_coding protein_coding MGP_CBAJ_T0016047.1 MGP_CBAJ_G0014159.1 mouse_genomes_project X 37725513 37726624 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096943.1 MGP_CBAJ_G0035746.1 mouse_genomes_project X 141439713 141443335 + MGP_CBAJ_P0096943 protein_coding protein_coding MGP_CBAJ_T0016552.1 MGP_CBAJ_G0014664.1 mouse_genomes_project X 149263279 149264309 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016312.1 MGP_CBAJ_G0014424.1 mouse_genomes_project X 100113304 100114031 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016613.1 MGP_CBAJ_G0014725.1 mouse_genomes_project X 164405992 164407038 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011055.1 MGP_CBAJ_G0009193.1 mouse_genomes_project X 73954783 73954854 - Mir5132 miRNA miRNA MGP_CBAJ_T0016623.1 MGP_CBAJ_G0014735.1 mouse_genomes_project X 165283386 165286052 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015948.1 MGP_CBAJ_G0014060.1 mouse_genomes_project X 2792123 2792836 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016004.1 MGP_CBAJ_G0014116.1 mouse_genomes_project X 15712796 15713129 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015956.1 MGP_CBAJ_G0014068.1 mouse_genomes_project X 3974534 3975128 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016474.1 MGP_CBAJ_G0014586.1 mouse_genomes_project X 135273260 135273702 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016632.1 MGP_CBAJ_G0014744.1 mouse_genomes_project X 167288366 167288864 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016194.1 MGP_CBAJ_G0014306.1 mouse_genomes_project X 75573004 75573283 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095221.1 MGP_CBAJ_G0035241.1 mouse_genomes_project X 13975035 14110237 + MGP_CBAJ_P0095221 Kdm6a protein_coding protein_coding MGP_CBAJ_T0095222.1 MGP_CBAJ_G0035241.1 mouse_genomes_project X 13975035 14110237 + MGP_CBAJ_P0095222 Kdm6a protein_coding protein_coding MGP_CBAJ_T0095223.1 MGP_CBAJ_G0035241.1 mouse_genomes_project X 13975108 14087792 + Kdm6a protein_coding retained_intron MGP_CBAJ_T0095224.1 MGP_CBAJ_G0035241.1 mouse_genomes_project X 13975466 14099682 + MGP_CBAJ_P0095224 Kdm6a protein_coding unknown_likely_coding MGP_CBAJ_T0095225.1 MGP_CBAJ_G0035241.1 mouse_genomes_project X 14104148 14107893 + Kdm6a protein_coding retained_intron MGP_CBAJ_T0096281.1 MGP_CBAJ_G0035546.1 mouse_genomes_project X 90683626 90691537 - MGP_CBAJ_P0096281 Pet2 protein_coding protein_coding MGP_CBAJ_T0096282.1 MGP_CBAJ_G0035546.1 mouse_genomes_project X 90683626 90691537 - MGP_CBAJ_P0096282 Pet2 protein_coding protein_coding MGP_CBAJ_T0015992.1 MGP_CBAJ_G0014104.1 mouse_genomes_project X 12059431 12059683 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095404.1 MGP_CBAJ_G0035310.1 mouse_genomes_project X 34746860 34802414 - MGP_CBAJ_P0095404 Tmem255a protein_coding protein_coding MGP_CBAJ_T0095405.1 MGP_CBAJ_G0035310.1 mouse_genomes_project X 34747593 34802424 - Tmem255a protein_coding retained_intron MGP_CBAJ_T0095406.1 MGP_CBAJ_G0035310.1 mouse_genomes_project X 34747593 34802424 - MGP_CBAJ_P0095406 Tmem255a protein_coding protein_coding MGP_CBAJ_T0095407.1 MGP_CBAJ_G0035310.1 mouse_genomes_project X 34747593 34802424 - MGP_CBAJ_P0095407 Tmem255a protein_coding protein_coding MGP_CBAJ_T0095408.1 MGP_CBAJ_G0035310.1 mouse_genomes_project X 34765361 34802386 - Tmem255a protein_coding processed_transcript MGP_CBAJ_T0097032.1 MGP_CBAJ_G0035782.1 mouse_genomes_project X 145682534 145693092 + MGP_CBAJ_P0097032 Cldn2 protein_coding protein_coding MGP_CBAJ_T0097033.1 MGP_CBAJ_G0035782.1 mouse_genomes_project X 145684492 145690419 + MGP_CBAJ_P0097033 Cldn2 protein_coding protein_coding MGP_CBAJ_T0097034.1 MGP_CBAJ_G0035782.1 mouse_genomes_project X 145687786 145690807 + MGP_CBAJ_P0097034 Cldn2 protein_coding protein_coding MGP_CBAJ_T0016542.1 MGP_CBAJ_G0014654.1 mouse_genomes_project X 148010016 148010274 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095135.1 MGP_CBAJ_G0035215.1 mouse_genomes_project X 5038691 5039244 + MGP_CBAJ_P0095135 4930557A04Rik protein_coding protein_coding MGP_CBAJ_T0015986.1 MGP_CBAJ_G0014098.1 mouse_genomes_project X 9462944 9465169 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016374.1 MGP_CBAJ_G0014486.1 mouse_genomes_project X 108726227 108727068 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096894.1 MGP_CBAJ_G0035730.1 mouse_genomes_project X 139915008 139917868 - MGP_CBAJ_P0096894 Armcx6 protein_coding protein_coding MGP_CBAJ_T0096895.1 MGP_CBAJ_G0035730.1 mouse_genomes_project X 139915010 139917954 - MGP_CBAJ_P0096895 Armcx6 protein_coding protein_coding MGP_CBAJ_T0096896.1 MGP_CBAJ_G0035730.1 mouse_genomes_project X 139916506 139917884 - Armcx6 protein_coding processed_transcript MGP_CBAJ_T0096897.1 MGP_CBAJ_G0035730.1 mouse_genomes_project X 139916686 139917898 - Armcx6 protein_coding processed_transcript MGP_CBAJ_T0011081.1 MGP_CBAJ_G0009219.1 mouse_genomes_project X 141096630 141096684 + Mir7646 miRNA miRNA MGP_CBAJ_T0016487.1 MGP_CBAJ_G0014599.1 mouse_genomes_project X 139686315 139686680 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097003.1 MGP_CBAJ_G0035770.1 mouse_genomes_project X 143914174 143915590 - MGP_CBAJ_P0097003 Tex13a protein_coding protein_coding MGP_CBAJ_T0016321.1 MGP_CBAJ_G0014433.1 mouse_genomes_project X 102775700 102776855 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095571.1 MGP_CBAJ_G0035353.1 mouse_genomes_project X 47519596 47520526 - MGP_CBAJ_P0095571 Olfr1323 protein_coding protein_coding MGP_CBAJ_T0096983.1 MGP_CBAJ_G0035765.1 mouse_genomes_project X 142584629 142587859 + MGP_CBAJ_P0096983 Zcchc18 protein_coding protein_coding MGP_CBAJ_T0096984.1 MGP_CBAJ_G0035765.1 mouse_genomes_project X 142584633 142587597 + MGP_CBAJ_P0096984 Zcchc18 protein_coding protein_coding MGP_CBAJ_T0096985.1 MGP_CBAJ_G0035765.1 mouse_genomes_project X 142584772 142589953 + MGP_CBAJ_P0096985 Zcchc18 protein_coding protein_coding MGP_CBAJ_T0016508.1 MGP_CBAJ_G0014620.1 mouse_genomes_project X 142703523 142704475 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016358.1 MGP_CBAJ_G0014470.1 mouse_genomes_project X 106629080 106629388 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016234.1 MGP_CBAJ_G0014346.1 mouse_genomes_project X 86081119 86082234 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011062.1 MGP_CBAJ_G0009200.1 mouse_genomes_project X 96277921 96278031 - Gm44477 miRNA miRNA MGP_CBAJ_T0016452.1 MGP_CBAJ_G0014564.1 mouse_genomes_project X 125205710 125206887 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009308.1 MGP_CBAJ_G0007458.1 mouse_genomes_project X 107780641 107809873 + lincRNA lincRNA MGP_CBAJ_T0005497.1 MGP_CBAJ_G0004627.1 mouse_genomes_project X 46845312 46966246 - Gm14697 antisense antisense MGP_CBAJ_T0095610.1 MGP_CBAJ_G0035369.1 mouse_genomes_project X 51053427 51081243 + MGP_CBAJ_P0095610 Fam122c protein_coding protein_coding MGP_CBAJ_T0095611.1 MGP_CBAJ_G0035369.1 mouse_genomes_project X 51053427 51112531 + MGP_CBAJ_P0095611 Fam122c protein_coding nonsense_mediated_decay MGP_CBAJ_T0095612.1 MGP_CBAJ_G0035369.1 mouse_genomes_project X 51053436 51112531 + MGP_CBAJ_P0095612 Fam122c protein_coding protein_coding MGP_CBAJ_T0098139.1 MGP_CBAJ_G0036412.1 mouse_genomes_project X 105527142 105527243 + Gm26152 rRNA rRNA MGP_CBAJ_T0016372.1 MGP_CBAJ_G0014484.1 mouse_genomes_project X 108603142 108603380 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096346.1 MGP_CBAJ_G0035569.1 mouse_genomes_project X 97042556 97210643 - MGP_CBAJ_P0096346 Arhgef9 protein_coding protein_coding MGP_CBAJ_T0096347.1 MGP_CBAJ_G0035569.1 mouse_genomes_project X 97042559 97173857 - MGP_CBAJ_P0096347 Arhgef9 protein_coding protein_coding MGP_CBAJ_T0096348.1 MGP_CBAJ_G0035569.1 mouse_genomes_project X 97042565 97173959 - MGP_CBAJ_P0096348 Arhgef9 protein_coding protein_coding MGP_CBAJ_T0096349.1 MGP_CBAJ_G0035569.1 mouse_genomes_project X 97043798 97210646 - MGP_CBAJ_P0096349 Arhgef9 protein_coding protein_coding MGP_CBAJ_T0096350.1 MGP_CBAJ_G0035569.1 mouse_genomes_project X 97043887 97210974 - MGP_CBAJ_P0096350 Arhgef9 protein_coding protein_coding MGP_CBAJ_T0096351.1 MGP_CBAJ_G0035569.1 mouse_genomes_project X 97045145 97210962 - MGP_CBAJ_P0096351 Arhgef9 protein_coding protein_coding MGP_CBAJ_T0096352.1 MGP_CBAJ_G0035569.1 mouse_genomes_project X 97045176 97210997 - MGP_CBAJ_P0096352 Arhgef9 protein_coding protein_coding MGP_CBAJ_T0096353.1 MGP_CBAJ_G0035569.1 mouse_genomes_project X 97045225 97076412 - MGP_CBAJ_P0096353 Arhgef9 protein_coding protein_coding MGP_CBAJ_T0096354.1 MGP_CBAJ_G0035569.1 mouse_genomes_project X 97045540 97048566 - MGP_CBAJ_P0096354 Arhgef9 protein_coding protein_coding MGP_CBAJ_T0096355.1 MGP_CBAJ_G0035569.1 mouse_genomes_project X 97045541 97052558 - MGP_CBAJ_P0096355 Arhgef9 protein_coding protein_coding MGP_CBAJ_T0096356.1 MGP_CBAJ_G0035569.1 mouse_genomes_project X 97045594 97173070 - MGP_CBAJ_P0096356 Arhgef9 protein_coding protein_coding MGP_CBAJ_T0096357.1 MGP_CBAJ_G0035569.1 mouse_genomes_project X 97070511 97173298 - MGP_CBAJ_P0096357 Arhgef9 protein_coding protein_coding MGP_CBAJ_T0096358.1 MGP_CBAJ_G0035569.1 mouse_genomes_project X 97076332 97210593 - MGP_CBAJ_P0096358 Arhgef9 protein_coding protein_coding MGP_CBAJ_T0096359.1 MGP_CBAJ_G0035569.1 mouse_genomes_project X 97096220 97174012 - MGP_CBAJ_P0096359 Arhgef9 protein_coding protein_coding MGP_CBAJ_T0096360.1 MGP_CBAJ_G0035569.1 mouse_genomes_project X 97109972 97173911 - MGP_CBAJ_P0096360 Arhgef9 protein_coding protein_coding MGP_CBAJ_T0016544.1 MGP_CBAJ_G0014656.1 mouse_genomes_project X 148212635 148213577 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016186.1 MGP_CBAJ_G0014298.1 mouse_genomes_project X 74502930 74503515 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0094951.1 MGP_CBAJ_G0035167.1 mouse_genomes_project X 2441706 2460736 + MGP_CBAJ_P0094951 Syp protein_coding protein_coding MGP_CBAJ_T0094952.1 MGP_CBAJ_G0035167.1 mouse_genomes_project X 2441873 2451194 + Syp protein_coding retained_intron MGP_CBAJ_T0094953.1 MGP_CBAJ_G0035167.1 mouse_genomes_project X 2441957 2448119 + MGP_CBAJ_P0094953 Syp protein_coding protein_coding MGP_CBAJ_T0094954.1 MGP_CBAJ_G0035167.1 mouse_genomes_project X 2442540 2448108 + Syp protein_coding processed_transcript MGP_CBAJ_T0094955.1 MGP_CBAJ_G0035167.1 mouse_genomes_project X 2442996 2448067 + Syp protein_coding retained_intron MGP_CBAJ_T0094956.1 MGP_CBAJ_G0035167.1 mouse_genomes_project X 2447733 2448858 + Syp protein_coding retained_intron MGP_CBAJ_T0016045.1 MGP_CBAJ_G0014157.1 mouse_genomes_project X 37436397 37436957 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015954.1 MGP_CBAJ_G0014066.1 mouse_genomes_project X 3584682 3586156 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096285.1 MGP_CBAJ_G0035549.1 mouse_genomes_project X 92358257 92359250 + MGP_CBAJ_P0096285 Gm44 protein_coding protein_coding MGP_CBAJ_T0096428.1 MGP_CBAJ_G0035589.1 mouse_genomes_project X 102227732 102255382 + MGP_CBAJ_P0096428 Tmem28 protein_coding protein_coding MGP_CBAJ_T0095851.1 MGP_CBAJ_G0035459.1 mouse_genomes_project X 73487783 73491879 + MGP_CBAJ_P0095851 Dusp9 protein_coding protein_coding MGP_CBAJ_T0097031.1 MGP_CBAJ_G0035781.1 mouse_genomes_project X 145654387 145657166 - MGP_CBAJ_P0097031 Ripply1 protein_coding protein_coding MGP_CBAJ_T0016172.1 MGP_CBAJ_G0014284.1 mouse_genomes_project X 70149379 70149924 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096447.1 MGP_CBAJ_G0035595.1 mouse_genomes_project X 103036950 103042906 + MGP_CBAJ_P0096447 Awat1 protein_coding protein_coding MGP_CBAJ_T0011071.1 MGP_CBAJ_G0009209.1 mouse_genomes_project X 106938577 106938668 + Gm24993 miRNA miRNA MGP_CBAJ_T0015996.1 MGP_CBAJ_G0014108.1 mouse_genomes_project X 13403365 13404202 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0094919.1 MGP_CBAJ_G0035160.1 mouse_genomes_project X 1819569 1833025 + MGP_CBAJ_P0094919 Akap4 protein_coding protein_coding MGP_CBAJ_T0094920.1 MGP_CBAJ_G0035160.1 mouse_genomes_project X 1819570 1833020 + MGP_CBAJ_P0094920 Akap4 protein_coding protein_coding MGP_CBAJ_T0094921.1 MGP_CBAJ_G0035160.1 mouse_genomes_project X 1820263 1833007 + MGP_CBAJ_P0094921 Akap4 protein_coding protein_coding MGP_CBAJ_T0016108.1 MGP_CBAJ_G0014220.1 mouse_genomes_project X 56581830 56582154 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016355.1 MGP_CBAJ_G0014467.1 mouse_genomes_project X 106513884 106514203 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097472.1 MGP_CBAJ_G0035884.1 mouse_genomes_project X 170259953 170277182 + MGP_CBAJ_P0097472 Rbbp7 protein_coding protein_coding MGP_CBAJ_T0097473.1 MGP_CBAJ_G0035884.1 mouse_genomes_project X 170260183 170279679 + MGP_CBAJ_P0097473 Rbbp7 protein_coding protein_coding MGP_CBAJ_T0097474.1 MGP_CBAJ_G0035884.1 mouse_genomes_project X 170260558 170273517 + MGP_CBAJ_P0097474 Rbbp7 protein_coding protein_coding MGP_CBAJ_T0097475.1 MGP_CBAJ_G0035884.1 mouse_genomes_project X 170275864 170279676 + MGP_CBAJ_P0097475 Rbbp7 protein_coding protein_coding MGP_CBAJ_T0096613.1 MGP_CBAJ_G0035639.1 mouse_genomes_project X 106543260 106666948 - MGP_CBAJ_P0096613 Slc16a2 protein_coding protein_coding MGP_CBAJ_T0096614.1 MGP_CBAJ_G0035639.1 mouse_genomes_project X 106545714 106552318 - Slc16a2 protein_coding retained_intron MGP_CBAJ_T0096615.1 MGP_CBAJ_G0035639.1 mouse_genomes_project X 106552247 106580021 - Slc16a2 protein_coding processed_transcript MGP_CBAJ_T0011003.1 MGP_CBAJ_G0009141.1 mouse_genomes_project X 36691226 36691297 - Gm26194 miRNA miRNA MGP_CBAJ_T0016109.1 MGP_CBAJ_G0014221.1 mouse_genomes_project X 56616023 56616703 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096868.1 MGP_CBAJ_G0035724.1 mouse_genomes_project X 139672256 139676051 - MGP_CBAJ_P0096868 protein_coding protein_coding MGP_CBAJ_T0016342.1 MGP_CBAJ_G0014454.1 mouse_genomes_project X 105886065 105886823 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096240.1 MGP_CBAJ_G0035534.1 mouse_genomes_project X 81478800 81502667 + Tmem47 protein_coding processed_transcript MGP_CBAJ_T0096241.1 MGP_CBAJ_G0035534.1 mouse_genomes_project X 81478807 81503622 + MGP_CBAJ_P0096241 Tmem47 protein_coding protein_coding MGP_CBAJ_T0096242.1 MGP_CBAJ_G0035534.1 mouse_genomes_project X 81478818 81505772 + MGP_CBAJ_P0096242 Tmem47 protein_coding protein_coding MGP_CBAJ_T0100931.1 MGP_CBAJ_G0039186.1 mouse_genomes_project X 55700205 55700276 - Snord61 snoRNA snoRNA MGP_CBAJ_T0096310.1 MGP_CBAJ_G0035560.1 mouse_genomes_project X 95915828 95970213 - MGP_CBAJ_P0096310 Zfx protein_coding protein_coding MGP_CBAJ_T0096311.1 MGP_CBAJ_G0035560.1 mouse_genomes_project X 95915829 95969706 - MGP_CBAJ_P0096311 Zfx protein_coding protein_coding MGP_CBAJ_T0096312.1 MGP_CBAJ_G0035560.1 mouse_genomes_project X 95915829 95970213 - MGP_CBAJ_P0096312 Zfx protein_coding protein_coding MGP_CBAJ_T0096313.1 MGP_CBAJ_G0035560.1 mouse_genomes_project X 95923790 95970181 - MGP_CBAJ_P0096313 Zfx protein_coding protein_coding MGP_CBAJ_T0096314.1 MGP_CBAJ_G0035560.1 mouse_genomes_project X 95939726 95969915 - MGP_CBAJ_P0096314 Zfx protein_coding protein_coding MGP_CBAJ_T0096315.1 MGP_CBAJ_G0035560.1 mouse_genomes_project X 95940224 95970488 - Zfx protein_coding processed_transcript MGP_CBAJ_T0096316.1 MGP_CBAJ_G0035560.1 mouse_genomes_project X 95958551 95969938 - Zfx protein_coding retained_intron MGP_CBAJ_T0015980.1 MGP_CBAJ_G0014092.1 mouse_genomes_project X 8386917 8387274 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099658.1 MGP_CBAJ_G0037913.1 mouse_genomes_project X 16645512 16645685 - Gm23628 snRNA snRNA MGP_CBAJ_T0016217.1 MGP_CBAJ_G0014329.1 mouse_genomes_project X 79121382 79124256 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016078.1 MGP_CBAJ_G0014190.1 mouse_genomes_project X 47082526 47082785 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016501.1 MGP_CBAJ_G0014613.1 mouse_genomes_project X 142017989 142020546 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097583.1 MGP_CBAJ_G0035912.1 mouse_genomes_project X 174371911 174384091 - MGP_CBAJ_P0097583 Tceanc protein_coding protein_coding MGP_CBAJ_T0097584.1 MGP_CBAJ_G0035912.1 mouse_genomes_project X 174374418 174375498 - MGP_CBAJ_P0097584 Tceanc protein_coding protein_coding MGP_CBAJ_T0097585.1 MGP_CBAJ_G0035912.1 mouse_genomes_project X 174375392 174394903 - MGP_CBAJ_P0097585 Tceanc protein_coding protein_coding MGP_CBAJ_T0100955.1 MGP_CBAJ_G0039210.1 mouse_genomes_project X 125245832 125245960 + Gm22590 snoRNA snoRNA MGP_CBAJ_T0016311.1 MGP_CBAJ_G0014423.1 mouse_genomes_project X 99410167 99411437 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011023.1 MGP_CBAJ_G0009161.1 mouse_genomes_project X 50810619 50810714 - Mir322 miRNA miRNA MGP_CBAJ_T0095416.1 MGP_CBAJ_G0035313.1 mouse_genomes_project X 35136963 35168857 - MGP_CBAJ_P0095416 Cul4b protein_coding protein_coding MGP_CBAJ_T0095417.1 MGP_CBAJ_G0035313.1 mouse_genomes_project X 35136963 35184255 - MGP_CBAJ_P0095417 Cul4b protein_coding protein_coding MGP_CBAJ_T0095418.1 MGP_CBAJ_G0035313.1 mouse_genomes_project X 35137259 35168994 - MGP_CBAJ_P0095418 Cul4b protein_coding nonsense_mediated_decay MGP_CBAJ_T0095419.1 MGP_CBAJ_G0035313.1 mouse_genomes_project X 35137263 35184242 - MGP_CBAJ_P0095419 Cul4b protein_coding protein_coding MGP_CBAJ_T0100929.1 MGP_CBAJ_G0039184.1 mouse_genomes_project X 39599253 39599383 - Gm23705 snoRNA snoRNA MGP_CBAJ_T0009272.1 MGP_CBAJ_G0007436.1 mouse_genomes_project X 46821106 46858169 - Gm14696 lincRNA lincRNA MGP_CBAJ_T0016000.1 MGP_CBAJ_G0014112.1 mouse_genomes_project X 14783592 14783998 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005514.1 MGP_CBAJ_G0004642.1 mouse_genomes_project X 95861073 95940857 + Gm14798 antisense antisense MGP_CBAJ_T0097341.1 MGP_CBAJ_G0035853.1 mouse_genomes_project X 161235094 161237775 + MGP_CBAJ_P0097341 Samt4 protein_coding protein_coding MGP_CBAJ_T0018377.1 MGP_CBAJ_G0015522.1 mouse_genomes_project X 103817446 103842934 + Gm21986 processed_transcript processed_transcript MGP_CBAJ_T0016064.1 MGP_CBAJ_G0014176.1 mouse_genomes_project X 42018717 42019687 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097084.1 MGP_CBAJ_G0035796.1 mouse_genomes_project X 147401043 147645779 + MGP_CBAJ_P0097084 Col4a5 protein_coding protein_coding MGP_CBAJ_T0097085.1 MGP_CBAJ_G0035796.1 mouse_genomes_project X 147401068 147645725 + MGP_CBAJ_P0097085 Col4a5 protein_coding protein_coding MGP_CBAJ_T0097086.1 MGP_CBAJ_G0035796.1 mouse_genomes_project X 147581213 147645779 + MGP_CBAJ_P0097086 Col4a5 protein_coding protein_coding MGP_CBAJ_T0097087.1 MGP_CBAJ_G0035796.1 mouse_genomes_project X 147612093 147629511 + Col4a5 protein_coding processed_transcript MGP_CBAJ_T0016643.1 MGP_CBAJ_G0014755.1 mouse_genomes_project X 170186489 170187131 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016075.1 MGP_CBAJ_G0014187.1 mouse_genomes_project X 46379757 46380054 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099672.1 MGP_CBAJ_G0037927.1 mouse_genomes_project X 54992943 54993049 + Gm23258 snRNA snRNA MGP_CBAJ_T0018429.1 MGP_CBAJ_G0015537.1 mouse_genomes_project X 178088208 178092024 - G530011O06Rik processed_transcript processed_transcript MGP_CBAJ_T0015984.1 MGP_CBAJ_G0014096.1 mouse_genomes_project X 8877743 8878556 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095795.1 MGP_CBAJ_G0035434.1 mouse_genomes_project X 71488535 71514356 + protein_coding processed_transcript MGP_CBAJ_T0016376.1 MGP_CBAJ_G0014488.1 mouse_genomes_project X 109222123 109222736 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016652.1 MGP_CBAJ_G0014764.1 mouse_genomes_project X 171412943 171413159 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016099.1 MGP_CBAJ_G0014211.1 mouse_genomes_project X 54088471 54090371 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016224.1 MGP_CBAJ_G0014336.1 mouse_genomes_project X 81058092 81058317 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009309.1 MGP_CBAJ_G0007459.1 mouse_genomes_project X 108354428 108402797 - 5330434G04Rik lincRNA lincRNA MGP_CBAJ_T0009310.1 MGP_CBAJ_G0007459.1 mouse_genomes_project X 108356506 108402797 - 5330434G04Rik lincRNA lincRNA MGP_CBAJ_T0009311.1 MGP_CBAJ_G0007459.1 mouse_genomes_project X 108381218 108402775 - 5330434G04Rik lincRNA lincRNA MGP_CBAJ_T0009312.1 MGP_CBAJ_G0007459.1 mouse_genomes_project X 108383886 108398935 - 5330434G04Rik lincRNA lincRNA MGP_CBAJ_T0016143.1 MGP_CBAJ_G0014255.1 mouse_genomes_project X 63031283 63031636 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016270.1 MGP_CBAJ_G0014382.1 mouse_genomes_project X 92843808 92844471 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096545.1 MGP_CBAJ_G0035615.1 mouse_genomes_project X 104094483 104170197 + MGP_CBAJ_P0096545 Taf1 protein_coding protein_coding MGP_CBAJ_T0096546.1 MGP_CBAJ_G0035615.1 mouse_genomes_project X 104094490 104170951 + MGP_CBAJ_P0096546 Taf1 protein_coding protein_coding MGP_CBAJ_T0096547.1 MGP_CBAJ_G0035615.1 mouse_genomes_project X 104094508 104170197 + MGP_CBAJ_P0096547 Taf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0096548.1 MGP_CBAJ_G0035615.1 mouse_genomes_project X 104094508 104110913 + MGP_CBAJ_P0096548 Taf1 protein_coding protein_coding MGP_CBAJ_T0096549.1 MGP_CBAJ_G0035615.1 mouse_genomes_project X 104118023 104170197 + Taf1 protein_coding retained_intron MGP_CBAJ_T0096550.1 MGP_CBAJ_G0035615.1 mouse_genomes_project X 104159709 104169734 + Taf1 protein_coding processed_transcript MGP_CBAJ_T0009339.1 MGP_CBAJ_G0007479.1 mouse_genomes_project X 174979792 174986973 - Gm8817 lincRNA lincRNA MGP_CBAJ_T0009340.1 MGP_CBAJ_G0007479.1 mouse_genomes_project X 174979934 174986973 - Gm8817 lincRNA lincRNA MGP_CBAJ_T0009341.1 MGP_CBAJ_G0007479.1 mouse_genomes_project X 174980150 174984982 - Gm8817 lincRNA lincRNA MGP_CBAJ_T0099654.1 MGP_CBAJ_G0037909.1 mouse_genomes_project X 11327205 11327312 - Gm25207 snRNA snRNA MGP_CBAJ_T0016423.1 MGP_CBAJ_G0014535.1 mouse_genomes_project X 118663664 118664123 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016389.1 MGP_CBAJ_G0014501.1 mouse_genomes_project X 110625283 110625598 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097004.1 MGP_CBAJ_G0035771.1 mouse_genomes_project X 144666982 144767814 + MGP_CBAJ_P0097004 Nrk protein_coding protein_coding MGP_CBAJ_T0097005.1 MGP_CBAJ_G0035771.1 mouse_genomes_project X 144666983 144723518 + Nrk protein_coding processed_transcript MGP_CBAJ_T0097006.1 MGP_CBAJ_G0035771.1 mouse_genomes_project X 144666983 144769254 + MGP_CBAJ_P0097006 Nrk protein_coding protein_coding MGP_CBAJ_T0097007.1 MGP_CBAJ_G0035771.1 mouse_genomes_project X 144666983 144768526 + MGP_CBAJ_P0097007 Nrk protein_coding nonsense_mediated_decay MGP_CBAJ_T0097008.1 MGP_CBAJ_G0035771.1 mouse_genomes_project X 144740289 144747350 + Nrk protein_coding retained_intron MGP_CBAJ_T0096754.1 MGP_CBAJ_G0035683.1 mouse_genomes_project X 115703778 115708573 + MGP_CBAJ_P0096754 4933403O08Rik protein_coding protein_coding MGP_CBAJ_T0096755.1 MGP_CBAJ_G0035683.1 mouse_genomes_project X 115705193 115708573 + MGP_CBAJ_P0096755 4933403O08Rik protein_coding protein_coding MGP_CBAJ_T0096756.1 MGP_CBAJ_G0035683.1 mouse_genomes_project X 115705302 115708500 + MGP_CBAJ_P0096756 4933403O08Rik protein_coding protein_coding MGP_CBAJ_T0016326.1 MGP_CBAJ_G0014438.1 mouse_genomes_project X 104078001 104079259 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011025.1 MGP_CBAJ_G0009163.1 mouse_genomes_project X 57543790 57543869 - Mir504 miRNA miRNA MGP_CBAJ_T0018335.1 MGP_CBAJ_G0015506.1 mouse_genomes_project X 2187160 2196429 - 2010204K13Rik processed_transcript processed_transcript MGP_CBAJ_T0018336.1 MGP_CBAJ_G0015506.1 mouse_genomes_project X 2187430 2188169 - 2010204K13Rik processed_transcript processed_transcript MGP_CBAJ_T0018337.1 MGP_CBAJ_G0015506.1 mouse_genomes_project X 2187446 2198332 - 2010204K13Rik processed_transcript processed_transcript MGP_CBAJ_T0018338.1 MGP_CBAJ_G0015506.1 mouse_genomes_project X 2187449 2222808 - 2010204K13Rik processed_transcript processed_transcript MGP_CBAJ_T0096381.1 MGP_CBAJ_G0035578.1 mouse_genomes_project X 98506071 98652746 - MGP_CBAJ_P0096381 Hsf3 protein_coding protein_coding MGP_CBAJ_T0096382.1 MGP_CBAJ_G0035578.1 mouse_genomes_project X 98506760 98550892 - MGP_CBAJ_P0096382 Hsf3 protein_coding protein_coding MGP_CBAJ_T0096383.1 MGP_CBAJ_G0035578.1 mouse_genomes_project X 98507263 98652735 - MGP_CBAJ_P0096383 Hsf3 protein_coding protein_coding MGP_CBAJ_T0096384.1 MGP_CBAJ_G0035578.1 mouse_genomes_project X 98507421 98567692 - MGP_CBAJ_P0096384 Hsf3 protein_coding protein_coding MGP_CBAJ_T0096385.1 MGP_CBAJ_G0035578.1 mouse_genomes_project X 98519156 98537115 - Hsf3 protein_coding retained_intron MGP_CBAJ_T0015950.1 MGP_CBAJ_G0014062.1 mouse_genomes_project X 2901101 2901487 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016021.1 MGP_CBAJ_G0014133.1 mouse_genomes_project X 18646303 18646787 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016192.1 MGP_CBAJ_G0014304.1 mouse_genomes_project X 75360041 75361970 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096905.1 MGP_CBAJ_G0035732.1 mouse_genomes_project X 140137857 140152996 - Nxf2 protein_coding retained_intron MGP_CBAJ_T0096906.1 MGP_CBAJ_G0035732.1 mouse_genomes_project X 140137859 140163400 - MGP_CBAJ_P0096906 Nxf2 protein_coding protein_coding MGP_CBAJ_T0096907.1 MGP_CBAJ_G0035732.1 mouse_genomes_project X 140137859 140163400 - MGP_CBAJ_P0096907 Nxf2 protein_coding protein_coding MGP_CBAJ_T0096908.1 MGP_CBAJ_G0035732.1 mouse_genomes_project X 140137859 140162542 - MGP_CBAJ_P0096908 Nxf2 protein_coding protein_coding MGP_CBAJ_T0095369.1 MGP_CBAJ_G0035286.1 mouse_genomes_project X 33477707 33479281 + MGP_CBAJ_P0095369 Sowahd protein_coding protein_coding MGP_CBAJ_T0097369.1 MGP_CBAJ_G0035862.1 mouse_genomes_project X 164593016 164632225 - Mbtps2 protein_coding processed_transcript MGP_CBAJ_T0097370.1 MGP_CBAJ_G0035862.1 mouse_genomes_project X 164608729 164668372 - MGP_CBAJ_P0097370 Mbtps2 protein_coding protein_coding MGP_CBAJ_T0097371.1 MGP_CBAJ_G0035862.1 mouse_genomes_project X 164629165 164668307 - MGP_CBAJ_P0097371 Mbtps2 protein_coding protein_coding MGP_CBAJ_T0097372.1 MGP_CBAJ_G0035862.1 mouse_genomes_project X 164629166 164668307 - MGP_CBAJ_P0097372 Mbtps2 protein_coding protein_coding MGP_CBAJ_T0097374.1 MGP_CBAJ_G0035862.1 mouse_genomes_project X 164632285 164644187 - Mbtps2 protein_coding processed_transcript MGP_CBAJ_T0097375.1 MGP_CBAJ_G0035862.1 mouse_genomes_project X 164635622 164668308 - Mbtps2 protein_coding retained_intron MGP_CBAJ_T0097376.1 MGP_CBAJ_G0035862.1 mouse_genomes_project X 164637351 164668336 - MGP_CBAJ_P0097376 Mbtps2 protein_coding protein_coding MGP_CBAJ_T0097377.1 MGP_CBAJ_G0035862.1 mouse_genomes_project X 164657005 164668300 - Mbtps2 protein_coding retained_intron MGP_CBAJ_T0016220.1 MGP_CBAJ_G0014332.1 mouse_genomes_project X 80409513 80410215 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011652.1 MGP_CBAJ_G0009790.1 mouse_genomes_project X 145509301 145509625 - Gm24380 misc_RNA misc_RNA MGP_CBAJ_T0094994.1 MGP_CBAJ_G0035175.1 mouse_genomes_project X 2587207 2590718 + Tfe3 protein_coding retained_intron MGP_CBAJ_T0094995.1 MGP_CBAJ_G0035175.1 mouse_genomes_project X 2587233 2591414 + Tfe3 protein_coding processed_transcript MGP_CBAJ_T0094996.1 MGP_CBAJ_G0035175.1 mouse_genomes_project X 2587305 2599849 + MGP_CBAJ_P0094996 Tfe3 protein_coding protein_coding MGP_CBAJ_T0094997.1 MGP_CBAJ_G0035175.1 mouse_genomes_project X 2587311 2599846 + MGP_CBAJ_P0094997 Tfe3 protein_coding protein_coding MGP_CBAJ_T0094998.1 MGP_CBAJ_G0035175.1 mouse_genomes_project X 2587323 2599848 + MGP_CBAJ_P0094998 Tfe3 protein_coding protein_coding MGP_CBAJ_T0094999.1 MGP_CBAJ_G0035175.1 mouse_genomes_project X 2587342 2599846 + MGP_CBAJ_P0094999 Tfe3 protein_coding protein_coding MGP_CBAJ_T0095000.1 MGP_CBAJ_G0035175.1 mouse_genomes_project X 2587344 2599848 + Tfe3 protein_coding retained_intron MGP_CBAJ_T0095001.1 MGP_CBAJ_G0035175.1 mouse_genomes_project X 2587414 2599849 + MGP_CBAJ_P0095001 Tfe3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0095002.1 MGP_CBAJ_G0035175.1 mouse_genomes_project X 2588590 2591439 + MGP_CBAJ_P0095002 Tfe3 protein_coding protein_coding MGP_CBAJ_T0095003.1 MGP_CBAJ_G0035175.1 mouse_genomes_project X 2588606 2599848 + MGP_CBAJ_P0095003 Tfe3 protein_coding protein_coding MGP_CBAJ_T0095004.1 MGP_CBAJ_G0035175.1 mouse_genomes_project X 2588688 2599844 + MGP_CBAJ_P0095004 Tfe3 protein_coding protein_coding MGP_CBAJ_T0095005.1 MGP_CBAJ_G0035175.1 mouse_genomes_project X 2588734 2599846 + MGP_CBAJ_P0095005 Tfe3 protein_coding protein_coding MGP_CBAJ_T0095006.1 MGP_CBAJ_G0035175.1 mouse_genomes_project X 2589299 2599844 + Tfe3 protein_coding retained_intron MGP_CBAJ_T0095007.1 MGP_CBAJ_G0035175.1 mouse_genomes_project X 2594076 2595965 + Tfe3 protein_coding retained_intron MGP_CBAJ_T0016229.1 MGP_CBAJ_G0014341.1 mouse_genomes_project X 83193081 83193883 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011631.1 MGP_CBAJ_G0009769.1 mouse_genomes_project X 68036893 68036949 + Gm27979 misc_RNA misc_RNA MGP_CBAJ_T0011654.1 MGP_CBAJ_G0009792.1 mouse_genomes_project X 150931551 150931873 + Gm26024 misc_RNA misc_RNA MGP_CBAJ_T0016141.1 MGP_CBAJ_G0014253.1 mouse_genomes_project X 62110377 62112256 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016161.1 MGP_CBAJ_G0014273.1 mouse_genomes_project X 67959519 67959867 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095587.1 MGP_CBAJ_G0035359.1 mouse_genomes_project X 49007149 49323659 - MGP_CBAJ_P0095587 Hs6st2 protein_coding protein_coding MGP_CBAJ_T0095588.1 MGP_CBAJ_G0035359.1 mouse_genomes_project X 49007149 49323812 - MGP_CBAJ_P0095588 Hs6st2 protein_coding protein_coding MGP_CBAJ_T0095589.1 MGP_CBAJ_G0035359.1 mouse_genomes_project X 49318738 49323304 - Hs6st2 protein_coding retained_intron MGP_CBAJ_T0095590.1 MGP_CBAJ_G0035359.1 mouse_genomes_project X 49321947 49322521 - Hs6st2 protein_coding processed_transcript MGP_CBAJ_T0095591.1 MGP_CBAJ_G0035359.1 mouse_genomes_project X 49322133 49323042 - Hs6st2 protein_coding processed_transcript MGP_CBAJ_T0011651.1 MGP_CBAJ_G0009789.1 mouse_genomes_project X 143851117 143851376 - Gm24675 misc_RNA misc_RNA MGP_CBAJ_T0016118.1 MGP_CBAJ_G0014230.1 mouse_genomes_project X 59127788 59128619 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016462.1 MGP_CBAJ_G0014574.1 mouse_genomes_project X 131073149 131073648 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010986.1 MGP_CBAJ_G0009124.1 mouse_genomes_project X 2005591 2005683 - Mir500 miRNA miRNA MGP_CBAJ_T0095752.1 MGP_CBAJ_G0035425.1 mouse_genomes_project X 69878585 69882125 + MGP_CBAJ_P0095752 1110012L19Rik protein_coding protein_coding MGP_CBAJ_T0016457.1 MGP_CBAJ_G0014569.1 mouse_genomes_project X 126414773 126416330 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0102239.1 MGP_CBAJ_G0040268.1 mouse_genomes_project X 34955128 34956811 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0011637.1 MGP_CBAJ_G0009775.1 mouse_genomes_project X 106267890 106268016 - Gm27927 misc_RNA misc_RNA MGP_CBAJ_T0011658.1 MGP_CBAJ_G0009796.1 mouse_genomes_project X 170183439 170183754 + Gm25557 misc_RNA misc_RNA MGP_CBAJ_T0009326.1 MGP_CBAJ_G0007472.1 mouse_genomes_project X 158877379 158909279 - Kantr lincRNA lincRNA MGP_CBAJ_T0009327.1 MGP_CBAJ_G0007472.1 mouse_genomes_project X 158877531 158909279 - Kantr lincRNA lincRNA MGP_CBAJ_T0009328.1 MGP_CBAJ_G0007472.1 mouse_genomes_project X 158877531 158909279 - Kantr lincRNA lincRNA MGP_CBAJ_T0009329.1 MGP_CBAJ_G0007472.1 mouse_genomes_project X 158877608 158909247 - Kantr lincRNA lincRNA MGP_CBAJ_T0009330.1 MGP_CBAJ_G0007472.1 mouse_genomes_project X 158896999 158899795 - Kantr lincRNA lincRNA MGP_CBAJ_T0009331.1 MGP_CBAJ_G0007472.1 mouse_genomes_project X 158897095 158909254 - Kantr lincRNA lincRNA MGP_CBAJ_T0009332.1 MGP_CBAJ_G0007472.1 mouse_genomes_project X 158901580 158909254 - Kantr lincRNA lincRNA MGP_CBAJ_T0016670.1 MGP_CBAJ_G0014782.1 mouse_genomes_project X 176400662 176401057 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016124.1 MGP_CBAJ_G0014236.1 mouse_genomes_project X 59513583 59514039 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097504.1 MGP_CBAJ_G0035892.1 mouse_genomes_project X 171580299 171603456 - MGP_CBAJ_P0097504 Zrsr2 protein_coding protein_coding MGP_CBAJ_T0097505.1 MGP_CBAJ_G0035892.1 mouse_genomes_project X 171583931 171595083 - Zrsr2 protein_coding retained_intron MGP_CBAJ_T0097506.1 MGP_CBAJ_G0035892.1 mouse_genomes_project X 171584834 171588343 - Zrsr2 protein_coding retained_intron MGP_CBAJ_T0097507.1 MGP_CBAJ_G0035892.1 mouse_genomes_project X 171593805 171595325 - Zrsr2 protein_coding retained_intron MGP_CBAJ_T0097508.1 MGP_CBAJ_G0035892.1 mouse_genomes_project X 171595252 171603465 - MGP_CBAJ_P0097508 Zrsr2 protein_coding protein_coding MGP_CBAJ_T0097509.1 MGP_CBAJ_G0035892.1 mouse_genomes_project X 171598457 171603029 - Zrsr2 protein_coding processed_transcript MGP_CBAJ_T0097510.1 MGP_CBAJ_G0035892.1 mouse_genomes_project X 171598506 171603419 - MGP_CBAJ_P0097510 Zrsr2 protein_coding protein_coding MGP_CBAJ_T0097511.1 MGP_CBAJ_G0035892.1 mouse_genomes_project X 171601338 171603528 - MGP_CBAJ_P0097511 Zrsr2 protein_coding protein_coding MGP_CBAJ_T0016253.1 MGP_CBAJ_G0014365.1 mouse_genomes_project X 89986958 89987150 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096443.1 MGP_CBAJ_G0035593.1 mouse_genomes_project X 102955718 102978385 + MGP_CBAJ_P0096443 Igbp1 protein_coding protein_coding MGP_CBAJ_T0096444.1 MGP_CBAJ_G0035593.1 mouse_genomes_project X 102955782 102960830 + Igbp1 protein_coding retained_intron MGP_CBAJ_T0095094.1 MGP_CBAJ_G0035196.1 mouse_genomes_project X 3093133 3105811 - MGP_CBAJ_P0095094 Porcn protein_coding protein_coding MGP_CBAJ_T0095095.1 MGP_CBAJ_G0035196.1 mouse_genomes_project X 3093134 3105777 - MGP_CBAJ_P0095095 Porcn protein_coding nonsense_mediated_decay MGP_CBAJ_T0095096.1 MGP_CBAJ_G0035196.1 mouse_genomes_project X 3093135 3105787 - MGP_CBAJ_P0095096 Porcn protein_coding protein_coding MGP_CBAJ_T0095097.1 MGP_CBAJ_G0035196.1 mouse_genomes_project X 3093135 3105787 - MGP_CBAJ_P0095097 Porcn protein_coding protein_coding MGP_CBAJ_T0095098.1 MGP_CBAJ_G0035196.1 mouse_genomes_project X 3093135 3105787 - MGP_CBAJ_P0095098 Porcn protein_coding protein_coding MGP_CBAJ_T0095099.1 MGP_CBAJ_G0035196.1 mouse_genomes_project X 3093138 3105783 - MGP_CBAJ_P0095099 Porcn protein_coding nonsense_mediated_decay MGP_CBAJ_T0095100.1 MGP_CBAJ_G0035196.1 mouse_genomes_project X 3102724 3105799 - Porcn protein_coding retained_intron MGP_CBAJ_T0095709.1 MGP_CBAJ_G0035405.1 mouse_genomes_project X 59498784 59500849 - MGP_CBAJ_P0095709 Sox3 protein_coding protein_coding MGP_CBAJ_T0099674.1 MGP_CBAJ_G0037929.1 mouse_genomes_project X 56745054 56745161 - Gm25851 snRNA snRNA MGP_CBAJ_T0016245.1 MGP_CBAJ_G0014357.1 mouse_genomes_project X 88793524 88794402 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098137.1 MGP_CBAJ_G0036410.1 mouse_genomes_project X 83943917 83944034 + n-R5s9 rRNA rRNA MGP_CBAJ_T0016591.1 MGP_CBAJ_G0014703.1 mouse_genomes_project X 158293278 158293994 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016665.1 MGP_CBAJ_G0014777.1 mouse_genomes_project X 174945475 174946010 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016461.1 MGP_CBAJ_G0014573.1 mouse_genomes_project X 130764394 130765057 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095553.1 MGP_CBAJ_G0035347.1 mouse_genomes_project X 46505608 46702616 - MGP_CBAJ_P0095553 Enox2 protein_coding protein_coding MGP_CBAJ_T0095554.1 MGP_CBAJ_G0035347.1 mouse_genomes_project X 46560953 46805077 - Enox2 protein_coding processed_transcript MGP_CBAJ_T0095555.1 MGP_CBAJ_G0035347.1 mouse_genomes_project X 46564169 46805030 - Enox2 protein_coding processed_transcript MGP_CBAJ_T0095556.1 MGP_CBAJ_G0035347.1 mouse_genomes_project X 46568460 46805060 - Enox2 protein_coding processed_transcript MGP_CBAJ_T0016265.1 MGP_CBAJ_G0014377.1 mouse_genomes_project X 92201075 92201592 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095549.1 MGP_CBAJ_G0035344.1 mouse_genomes_project X 46137911 46144360 - MGP_CBAJ_P0095549 Gpr119 protein_coding protein_coding MGP_CBAJ_T0095491.1 MGP_CBAJ_G0035331.1 mouse_genomes_project X 45181411 45267101 - MGP_CBAJ_P0095491 Smarca1 protein_coding protein_coding MGP_CBAJ_T0095492.1 MGP_CBAJ_G0035331.1 mouse_genomes_project X 45181413 45267101 - MGP_CBAJ_P0095492 Smarca1 protein_coding protein_coding MGP_CBAJ_T0095493.1 MGP_CBAJ_G0035331.1 mouse_genomes_project X 45181676 45267134 - MGP_CBAJ_P0095493 Smarca1 protein_coding protein_coding MGP_CBAJ_T0095494.1 MGP_CBAJ_G0035331.1 mouse_genomes_project X 45213434 45266978 - MGP_CBAJ_P0095494 Smarca1 protein_coding protein_coding MGP_CBAJ_T0095495.1 MGP_CBAJ_G0035331.1 mouse_genomes_project X 45241511 45267014 - MGP_CBAJ_P0095495 Smarca1 protein_coding protein_coding MGP_CBAJ_T0095496.1 MGP_CBAJ_G0035331.1 mouse_genomes_project X 45261746 45267523 - MGP_CBAJ_P0095496 Smarca1 protein_coding protein_coding MGP_CBAJ_T0095497.1 MGP_CBAJ_G0035331.1 mouse_genomes_project X 45264397 45267556 - Smarca1 protein_coding processed_transcript MGP_CBAJ_T0095114.1 MGP_CBAJ_G0035201.1 mouse_genomes_project X 3847657 3855077 + MGP_CBAJ_P0095114 protein_coding protein_coding MGP_CBAJ_T0018341.1 MGP_CBAJ_G0015509.1 mouse_genomes_project X 2982887 2996186 + Gm6787 processed_transcript processed_transcript MGP_CBAJ_T0096626.1 MGP_CBAJ_G0035645.1 mouse_genomes_project X 107823612 107825928 - MGP_CBAJ_P0096626 Magee2 protein_coding protein_coding MGP_CBAJ_T0095821.1 MGP_CBAJ_G0035446.1 mouse_genomes_project X 72685820 72737096 + MGP_CBAJ_P0095821 Zfp185 protein_coding protein_coding MGP_CBAJ_T0095822.1 MGP_CBAJ_G0035446.1 mouse_genomes_project X 72685841 72737096 + MGP_CBAJ_P0095822 Zfp185 protein_coding protein_coding MGP_CBAJ_T0095823.1 MGP_CBAJ_G0035446.1 mouse_genomes_project X 72686734 72696051 + MGP_CBAJ_P0095823 Zfp185 protein_coding protein_coding MGP_CBAJ_T0096958.1 MGP_CBAJ_G0035754.1 mouse_genomes_project X 141901873 142009177 - MGP_CBAJ_P0096958 Kir3dl1 protein_coding protein_coding MGP_CBAJ_T0016158.1 MGP_CBAJ_G0014270.1 mouse_genomes_project X 67672530 67672896 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011065.1 MGP_CBAJ_G0009203.1 mouse_genomes_project X 102823081 102823170 + Mir676 miRNA miRNA MGP_CBAJ_T0009292.1 MGP_CBAJ_G0007452.1 mouse_genomes_project X 101790972 101833886 - Gm14812 lincRNA lincRNA MGP_CBAJ_T0096680.1 MGP_CBAJ_G0035658.1 mouse_genomes_project X 109422561 109468704 - MGP_CBAJ_P0096680 protein_coding protein_coding MGP_CBAJ_T0095992.1 MGP_CBAJ_G0035477.1 mouse_genomes_project X 74063877 74093852 + MGP_CBAJ_P0095992 Opn1mw protein_coding protein_coding MGP_CBAJ_T0095993.1 MGP_CBAJ_G0035477.1 mouse_genomes_project X 74063879 74093843 + MGP_CBAJ_P0095993 Opn1mw protein_coding protein_coding MGP_CBAJ_T0095994.1 MGP_CBAJ_G0035477.1 mouse_genomes_project X 74063894 74085830 + Opn1mw protein_coding processed_transcript MGP_CBAJ_T0095995.1 MGP_CBAJ_G0035477.1 mouse_genomes_project X 74080179 74093848 + Opn1mw protein_coding processed_transcript MGP_CBAJ_T0095996.1 MGP_CBAJ_G0035477.1 mouse_genomes_project X 74080200 74082143 + Opn1mw protein_coding processed_transcript MGP_CBAJ_T0095997.1 MGP_CBAJ_G0035477.1 mouse_genomes_project X 74080697 74093848 + MGP_CBAJ_P0095997 Opn1mw protein_coding protein_coding MGP_CBAJ_T0016435.1 MGP_CBAJ_G0014547.1 mouse_genomes_project X 121436982 121438668 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016345.1 MGP_CBAJ_G0014457.1 mouse_genomes_project X 106073741 106074808 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095618.1 MGP_CBAJ_G0035374.1 mouse_genomes_project X 51486531 51486932 - MGP_CBAJ_P0095618 Cxx1c protein_coding protein_coding MGP_CBAJ_T0005505.1 MGP_CBAJ_G0004634.1 mouse_genomes_project X 68763741 68768431 - Gm14705 antisense antisense MGP_CBAJ_T0005506.1 MGP_CBAJ_G0004634.1 mouse_genomes_project X 68765103 68767503 - Gm14705 antisense antisense MGP_CBAJ_T0095801.1 MGP_CBAJ_G0035437.1 mouse_genomes_project X 71652320 71668436 + MGP_CBAJ_P0095801 Fate1 protein_coding protein_coding MGP_CBAJ_T0095802.1 MGP_CBAJ_G0035437.1 mouse_genomes_project X 71660951 71668436 + MGP_CBAJ_P0095802 Fate1 protein_coding protein_coding MGP_CBAJ_T0095803.1 MGP_CBAJ_G0035437.1 mouse_genomes_project X 71662590 71668158 + Fate1 protein_coding processed_transcript MGP_CBAJ_T0095203.1 MGP_CBAJ_G0035231.1 mouse_genomes_project X 9175109 9181127 + MGP_CBAJ_P0095203 Gpr82 protein_coding protein_coding MGP_CBAJ_T0095122.1 MGP_CBAJ_G0035209.1 mouse_genomes_project X 4328251 4397522 + MGP_CBAJ_P0095122 Lancl3 protein_coding protein_coding MGP_CBAJ_T0099714.1 MGP_CBAJ_G0037969.1 mouse_genomes_project X 157898530 157898680 + Gm22248 snRNA snRNA MGP_CBAJ_T0009269.1 MGP_CBAJ_G0007433.1 mouse_genomes_project X 35063802 35071736 + Gm7598 lincRNA lincRNA MGP_CBAJ_T0016061.1 MGP_CBAJ_G0014173.1 mouse_genomes_project X 41424522 41424970 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016455.1 MGP_CBAJ_G0014567.1 mouse_genomes_project X 126138517 126141444 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016669.1 MGP_CBAJ_G0014781.1 mouse_genomes_project X 176081393 176081862 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016578.1 MGP_CBAJ_G0014690.1 mouse_genomes_project X 153221418 153223614 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009258.1 MGP_CBAJ_G0007426.1 mouse_genomes_project X 10353807 10409995 + Gm14505 lincRNA lincRNA MGP_CBAJ_T0016434.1 MGP_CBAJ_G0014546.1 mouse_genomes_project X 121311720 121312813 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016044.1 MGP_CBAJ_G0014156.1 mouse_genomes_project X 36880547 36881060 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096957.1 MGP_CBAJ_G0035753.1 mouse_genomes_project X 141705654 141706707 + MGP_CBAJ_P0096957 Ngfrap1 protein_coding protein_coding MGP_CBAJ_T0016436.1 MGP_CBAJ_G0014548.1 mouse_genomes_project X 121596762 121597751 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005515.1 MGP_CBAJ_G0004643.1 mouse_genomes_project X 97497472 97609173 + antisense antisense MGP_CBAJ_T0016449.1 MGP_CBAJ_G0014561.1 mouse_genomes_project X 124508688 124508941 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009302.1 MGP_CBAJ_G0007457.1 mouse_genomes_project X 106369016 106447137 - Ftx lincRNA lincRNA MGP_CBAJ_T0009303.1 MGP_CBAJ_G0007457.1 mouse_genomes_project X 106371006 106434299 - Ftx lincRNA lincRNA MGP_CBAJ_T0009304.1 MGP_CBAJ_G0007457.1 mouse_genomes_project X 106377677 106434208 - Ftx lincRNA lincRNA MGP_CBAJ_T0009305.1 MGP_CBAJ_G0007457.1 mouse_genomes_project X 106377677 106447046 - Ftx lincRNA lincRNA MGP_CBAJ_T0009306.1 MGP_CBAJ_G0007457.1 mouse_genomes_project X 106419120 106447137 - Ftx lincRNA lincRNA MGP_CBAJ_T0009307.1 MGP_CBAJ_G0007457.1 mouse_genomes_project X 106419173 106445883 - Ftx lincRNA lincRNA MGP_CBAJ_T0016541.1 MGP_CBAJ_G0014653.1 mouse_genomes_project X 147966833 147968980 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016145.1 MGP_CBAJ_G0014257.1 mouse_genomes_project X 63947605 63948917 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016535.1 MGP_CBAJ_G0014647.1 mouse_genomes_project X 147741011 147741494 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010992.1 MGP_CBAJ_G0009130.1 mouse_genomes_project X 8295475 8295557 - Gm25063 miRNA miRNA MGP_CBAJ_T0016197.1 MGP_CBAJ_G0014309.1 mouse_genomes_project X 76491272 76492044 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016365.1 MGP_CBAJ_G0014477.1 mouse_genomes_project X 107922473 107925301 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016396.1 MGP_CBAJ_G0014508.1 mouse_genomes_project X 113793608 113796014 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097058.1 MGP_CBAJ_G0035787.1 mouse_genomes_project X 146279511 146383846 + MGP_CBAJ_P0097058 Frmpd3 protein_coding unknown_likely_coding MGP_CBAJ_T0097059.1 MGP_CBAJ_G0035787.1 mouse_genomes_project X 146310599 146338734 + MGP_CBAJ_P0097059 Frmpd3 protein_coding protein_coding MGP_CBAJ_T0097060.1 MGP_CBAJ_G0035787.1 mouse_genomes_project X 146326797 146339379 + MGP_CBAJ_P0097060 Frmpd3 protein_coding protein_coding MGP_CBAJ_T0096295.1 MGP_CBAJ_G0035556.1 mouse_genomes_project X 95091411 95439730 - MGP_CBAJ_P0096295 Pola1 protein_coding protein_coding MGP_CBAJ_T0096296.1 MGP_CBAJ_G0035556.1 mouse_genomes_project X 95283817 95294318 - Pola1 protein_coding processed_transcript MGP_CBAJ_T0096297.1 MGP_CBAJ_G0035556.1 mouse_genomes_project X 95430611 95439718 - Pola1 protein_coding retained_intron MGP_CBAJ_T0096298.1 MGP_CBAJ_G0035556.1 mouse_genomes_project X 95430833 95439690 - Pola1 protein_coding processed_transcript MGP_CBAJ_T0095490.1 MGP_CBAJ_G0035330.1 mouse_genomes_project X 43596266 43597605 + MGP_CBAJ_P0095490 Actrt1 protein_coding protein_coding MGP_CBAJ_T0016164.1 MGP_CBAJ_G0014276.1 mouse_genomes_project X 68152989 68153217 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010988.1 MGP_CBAJ_G0009126.1 mouse_genomes_project X 2011205 2011270 - Mir362 miRNA miRNA MGP_CBAJ_T0097193.1 MGP_CBAJ_G0035822.1 mouse_genomes_project X 157048649 157085839 + MGP_CBAJ_P0097193 Pfkfb1 protein_coding protein_coding MGP_CBAJ_T0097194.1 MGP_CBAJ_G0035822.1 mouse_genomes_project X 157048676 157078119 + Pfkfb1 protein_coding processed_transcript MGP_CBAJ_T0097195.1 MGP_CBAJ_G0035822.1 mouse_genomes_project X 157050341 157100713 + MGP_CBAJ_P0097195 Pfkfb1 protein_coding protein_coding MGP_CBAJ_T0097196.1 MGP_CBAJ_G0035822.1 mouse_genomes_project X 157054898 157100713 + MGP_CBAJ_P0097196 Pfkfb1 protein_coding protein_coding MGP_CBAJ_T0097197.1 MGP_CBAJ_G0035822.1 mouse_genomes_project X 157055030 157100692 + Pfkfb1 protein_coding retained_intron MGP_CBAJ_T0097198.1 MGP_CBAJ_G0035822.1 mouse_genomes_project X 157079120 157085362 + Pfkfb1 protein_coding processed_transcript MGP_CBAJ_T0097199.1 MGP_CBAJ_G0035822.1 mouse_genomes_project X 157085996 157098812 + Pfkfb1 protein_coding processed_transcript MGP_CBAJ_T0016655.1 MGP_CBAJ_G0014767.1 mouse_genomes_project X 172625030 172625307 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016232.1 MGP_CBAJ_G0014344.1 mouse_genomes_project X 85687755 85688067 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016441.1 MGP_CBAJ_G0014553.1 mouse_genomes_project X 121854217 121855974 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096445.1 MGP_CBAJ_G0035594.1 mouse_genomes_project X 102987103 103008133 + Dgat2l6 protein_coding retained_intron MGP_CBAJ_T0096446.1 MGP_CBAJ_G0035594.1 mouse_genomes_project X 102987106 103008386 + MGP_CBAJ_P0096446 Dgat2l6 protein_coding protein_coding MGP_CBAJ_T0016485.1 MGP_CBAJ_G0014597.1 mouse_genomes_project X 138399719 138404971 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097045.1 MGP_CBAJ_G0035784.1 mouse_genomes_project X 145776479 145894560 - MGP_CBAJ_P0097045 Rbm41 protein_coding protein_coding MGP_CBAJ_T0097046.1 MGP_CBAJ_G0035784.1 mouse_genomes_project X 145835068 145894522 - MGP_CBAJ_P0097046 Rbm41 protein_coding protein_coding MGP_CBAJ_T0097047.1 MGP_CBAJ_G0035784.1 mouse_genomes_project X 145835100 145894507 - MGP_CBAJ_P0097047 Rbm41 protein_coding protein_coding MGP_CBAJ_T0097048.1 MGP_CBAJ_G0035784.1 mouse_genomes_project X 145835931 145894516 - MGP_CBAJ_P0097048 Rbm41 protein_coding protein_coding MGP_CBAJ_T0097049.1 MGP_CBAJ_G0035784.1 mouse_genomes_project X 145863643 145890047 - Rbm41 protein_coding retained_intron MGP_CBAJ_T0097050.1 MGP_CBAJ_G0035784.1 mouse_genomes_project X 145864427 145894501 - Rbm41 protein_coding processed_transcript MGP_CBAJ_T0097051.1 MGP_CBAJ_G0035784.1 mouse_genomes_project X 145888321 145894531 - Rbm41 protein_coding retained_intron MGP_CBAJ_T0016664.1 MGP_CBAJ_G0014776.1 mouse_genomes_project X 174852381 174852828 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016252.1 MGP_CBAJ_G0014364.1 mouse_genomes_project X 89967298 89969743 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016336.1 MGP_CBAJ_G0014448.1 mouse_genomes_project X 105799707 105801477 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016254.1 MGP_CBAJ_G0014366.1 mouse_genomes_project X 89993107 89994229 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016337.1 MGP_CBAJ_G0014449.1 mouse_genomes_project X 105834161 105834851 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016656.1 MGP_CBAJ_G0014768.1 mouse_genomes_project X 173501340 173501719 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016524.1 MGP_CBAJ_G0014636.1 mouse_genomes_project X 145779902 145781382 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0094929.1 MGP_CBAJ_G0035163.1 mouse_genomes_project X 2358215 2375117 - MGP_CBAJ_P0094929 Ppp1r3f protein_coding protein_coding MGP_CBAJ_T0094930.1 MGP_CBAJ_G0035163.1 mouse_genomes_project X 2359871 2375082 - MGP_CBAJ_P0094930 Ppp1r3f protein_coding protein_coding MGP_CBAJ_T0094931.1 MGP_CBAJ_G0035163.1 mouse_genomes_project X 2360141 2365127 - Ppp1r3f protein_coding processed_transcript MGP_CBAJ_T0094932.1 MGP_CBAJ_G0035163.1 mouse_genomes_project X 2361161 2373677 - MGP_CBAJ_P0094932 Ppp1r3f protein_coding protein_coding MGP_CBAJ_T0094933.1 MGP_CBAJ_G0035163.1 mouse_genomes_project X 2363149 2365158 - Ppp1r3f protein_coding processed_transcript MGP_CBAJ_T0015991.1 MGP_CBAJ_G0014103.1 mouse_genomes_project X 11945154 11945541 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016240.1 MGP_CBAJ_G0014352.1 mouse_genomes_project X 86703371 86703630 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097405.1 MGP_CBAJ_G0035870.1 mouse_genomes_project X 166741016 166771296 + MGP_CBAJ_P0097405 A830080D01Rik protein_coding protein_coding MGP_CBAJ_T0097406.1 MGP_CBAJ_G0035870.1 mouse_genomes_project X 166751866 166819392 + MGP_CBAJ_P0097406 A830080D01Rik protein_coding protein_coding MGP_CBAJ_T0097407.1 MGP_CBAJ_G0035870.1 mouse_genomes_project X 166761834 166771346 + MGP_CBAJ_P0097407 A830080D01Rik protein_coding protein_coding MGP_CBAJ_T0097408.1 MGP_CBAJ_G0035870.1 mouse_genomes_project X 166762309 166819379 + MGP_CBAJ_P0097408 A830080D01Rik protein_coding protein_coding MGP_CBAJ_T0097409.1 MGP_CBAJ_G0035870.1 mouse_genomes_project X 166787118 166818513 + A830080D01Rik protein_coding processed_transcript MGP_CBAJ_T0097410.1 MGP_CBAJ_G0035870.1 mouse_genomes_project X 166787807 166795367 + A830080D01Rik protein_coding retained_intron MGP_CBAJ_T0098169.1 MGP_CBAJ_G0036442.1 mouse_genomes_project X 82689712 82689931 + Gm26174 ribozyme ribozyme MGP_CBAJ_T0009273.1 MGP_CBAJ_G0007437.1 mouse_genomes_project X 50807558 50808980 - Gm28730 lincRNA lincRNA MGP_CBAJ_T0009274.1 MGP_CBAJ_G0007437.1 mouse_genomes_project X 50807566 50808964 - Gm28730 lincRNA lincRNA MGP_CBAJ_T0009275.1 MGP_CBAJ_G0007437.1 mouse_genomes_project X 50807671 50809524 - Gm28730 lincRNA lincRNA MGP_CBAJ_T0097027.1 MGP_CBAJ_G0035779.1 mouse_genomes_project X 145546301 145622998 + MGP_CBAJ_P0097027 Tbc1d8b protein_coding protein_coding MGP_CBAJ_T0097030.1 MGP_CBAJ_G0035779.1 mouse_genomes_project X 145605966 145614826 + Tbc1d8b protein_coding processed_transcript MGP_CBAJ_T0102258.1 MGP_CBAJ_G0040287.1 mouse_genomes_project X 87333896 87334928 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0011094.1 MGP_CBAJ_G0009232.1 mouse_genomes_project X 153425426 153425564 + Gm24627 miRNA miRNA MGP_CBAJ_T0016302.1 MGP_CBAJ_G0014414.1 mouse_genomes_project X 97404701 97406815 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016579.1 MGP_CBAJ_G0014691.1 mouse_genomes_project X 156812805 156813009 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016351.1 MGP_CBAJ_G0014463.1 mouse_genomes_project X 106316820 106317249 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099680.1 MGP_CBAJ_G0037935.1 mouse_genomes_project X 75048116 75048223 - Gm25629 snRNA snRNA MGP_CBAJ_T0097607.1 MGP_CBAJ_G0035919.1 mouse_genomes_project X 176691086 176715428 - MGP_CBAJ_P0097607 Msl3 protein_coding protein_coding MGP_CBAJ_T0097608.1 MGP_CBAJ_G0035919.1 mouse_genomes_project X 176693948 176698839 - Msl3 protein_coding retained_intron MGP_CBAJ_T0097609.1 MGP_CBAJ_G0035919.1 mouse_genomes_project X 176698510 176714118 - Msl3 protein_coding retained_intron MGP_CBAJ_T0097103.1 MGP_CBAJ_G0035805.1 mouse_genomes_project X 148912308 149041382 - MGP_CBAJ_P0097103 Ammecr1 protein_coding protein_coding MGP_CBAJ_T0016412.1 MGP_CBAJ_G0014524.1 mouse_genomes_project X 116463190 116464125 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097532.1 MGP_CBAJ_G0035900.1 mouse_genomes_project X 172128949 172143069 + MGP_CBAJ_P0097532 Piga protein_coding nonsense_mediated_decay MGP_CBAJ_T0097533.1 MGP_CBAJ_G0035900.1 mouse_genomes_project X 172128949 172143064 + MGP_CBAJ_P0097533 Piga protein_coding protein_coding MGP_CBAJ_T0097534.1 MGP_CBAJ_G0035900.1 mouse_genomes_project X 172128974 172143062 + MGP_CBAJ_P0097534 Piga protein_coding nonsense_mediated_decay MGP_CBAJ_T0097535.1 MGP_CBAJ_G0035900.1 mouse_genomes_project X 172129065 172143066 + MGP_CBAJ_P0097535 Piga protein_coding protein_coding MGP_CBAJ_T0097536.1 MGP_CBAJ_G0035900.1 mouse_genomes_project X 172131742 172141131 + MGP_CBAJ_P0097536 Piga protein_coding protein_coding MGP_CBAJ_T0097537.1 MGP_CBAJ_G0035900.1 mouse_genomes_project X 172134672 172141218 + Piga protein_coding retained_intron MGP_CBAJ_T0018396.1 MGP_CBAJ_G0015525.1 mouse_genomes_project X 112142005 112202051 + processed_transcript processed_transcript MGP_CBAJ_T0018397.1 MGP_CBAJ_G0015525.1 mouse_genomes_project X 112142029 112201845 + processed_transcript processed_transcript MGP_CBAJ_T0018398.1 MGP_CBAJ_G0015525.1 mouse_genomes_project X 112142105 112285926 + processed_transcript processed_transcript MGP_CBAJ_T0018399.1 MGP_CBAJ_G0015525.1 mouse_genomes_project X 112142184 112201838 + processed_transcript processed_transcript MGP_CBAJ_T0018400.1 MGP_CBAJ_G0015525.1 mouse_genomes_project X 112142191 112147035 + processed_transcript retained_intron MGP_CBAJ_T0018401.1 MGP_CBAJ_G0015525.1 mouse_genomes_project X 112142206 112188547 + processed_transcript processed_transcript MGP_CBAJ_T0018402.1 MGP_CBAJ_G0015525.1 mouse_genomes_project X 112142222 112188751 + processed_transcript processed_transcript MGP_CBAJ_T0018403.1 MGP_CBAJ_G0015525.1 mouse_genomes_project X 112220702 112286241 + processed_transcript processed_transcript MGP_CBAJ_T0016443.1 MGP_CBAJ_G0014555.1 mouse_genomes_project X 122249932 122251737 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099703.1 MGP_CBAJ_G0037958.1 mouse_genomes_project X 131750261 131750366 + Gm22139 snRNA snRNA MGP_CBAJ_T0095620.1 MGP_CBAJ_G0035376.1 mouse_genomes_project X 51592327 51606954 - MGP_CBAJ_P0095620 1700013H16Rik protein_coding protein_coding MGP_CBAJ_T0097158.1 MGP_CBAJ_G0035817.1 mouse_genomes_project X 153728142 153777128 - MGP_CBAJ_P0097158 Il13ra2 protein_coding protein_coding MGP_CBAJ_T0097159.1 MGP_CBAJ_G0035817.1 mouse_genomes_project X 153728144 153748493 - MGP_CBAJ_P0097159 Il13ra2 protein_coding protein_coding MGP_CBAJ_T0016510.1 MGP_CBAJ_G0014622.1 mouse_genomes_project X 142718847 142719445 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016131.1 MGP_CBAJ_G0014243.1 mouse_genomes_project X 60492805 60493457 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095228.1 MGP_CBAJ_G0035243.1 mouse_genomes_project X 15424067 15425861 - MGP_CBAJ_P0095228 BC049702 protein_coding protein_coding MGP_CBAJ_T0096806.1 MGP_CBAJ_G0035706.1 mouse_genomes_project X 132181595 132199899 - MGP_CBAJ_P0096806 Cldn34c4 protein_coding protein_coding MGP_CBAJ_T0016672.1 MGP_CBAJ_G0014784.1 mouse_genomes_project X 176815932 176816332 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016318.1 MGP_CBAJ_G0014430.1 mouse_genomes_project X 102198353 102199546 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095804.1 MGP_CBAJ_G0035438.1 mouse_genomes_project X 71671240 71689370 + MGP_CBAJ_P0095804 Cnga2 protein_coding protein_coding MGP_CBAJ_T0095805.1 MGP_CBAJ_G0035438.1 mouse_genomes_project X 71671246 71680727 + Cnga2 protein_coding processed_transcript MGP_CBAJ_T0016104.1 MGP_CBAJ_G0014216.1 mouse_genomes_project X 55986419 55987595 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016137.1 MGP_CBAJ_G0014249.1 mouse_genomes_project X 61133507 61134229 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096401.1 MGP_CBAJ_G0035584.1 mouse_genomes_project X 100860260 101220281 - MGP_CBAJ_P0096401 Ophn1 protein_coding protein_coding MGP_CBAJ_T0096402.1 MGP_CBAJ_G0035584.1 mouse_genomes_project X 100864234 101220077 - MGP_CBAJ_P0096402 Ophn1 protein_coding protein_coding MGP_CBAJ_T0096403.1 MGP_CBAJ_G0035584.1 mouse_genomes_project X 100864240 100884464 - MGP_CBAJ_P0096403 Ophn1 protein_coding protein_coding MGP_CBAJ_T0096404.1 MGP_CBAJ_G0035584.1 mouse_genomes_project X 100869551 100884410 - Ophn1 protein_coding processed_transcript MGP_CBAJ_T0096405.1 MGP_CBAJ_G0035584.1 mouse_genomes_project X 101023367 101220321 - Ophn1 protein_coding retained_intron MGP_CBAJ_T0096406.1 MGP_CBAJ_G0035584.1 mouse_genomes_project X 101023595 101220281 - Ophn1 protein_coding retained_intron MGP_CBAJ_T0096407.1 MGP_CBAJ_G0035584.1 mouse_genomes_project X 101054830 101220281 - MGP_CBAJ_P0096407 Ophn1 protein_coding protein_coding MGP_CBAJ_T0096408.1 MGP_CBAJ_G0035584.1 mouse_genomes_project X 101126579 101219905 - Ophn1 protein_coding retained_intron MGP_CBAJ_T0096409.1 MGP_CBAJ_G0035584.1 mouse_genomes_project X 101201858 101219680 - Ophn1 protein_coding processed_transcript MGP_CBAJ_T0096410.1 MGP_CBAJ_G0035584.1 mouse_genomes_project X 101217055 101219921 - Ophn1 protein_coding retained_intron MGP_CBAJ_T0102250.1 MGP_CBAJ_G0040279.1 mouse_genomes_project X 75551535 75586508 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016096.1 MGP_CBAJ_G0014208.1 mouse_genomes_project X 51621993 51622287 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0095876.1 MGP_CBAJ_G0035465.1 mouse_genomes_project X 73659192 73663713 + Srpk3 protein_coding retained_intron MGP_CBAJ_T0095877.1 MGP_CBAJ_G0035465.1 mouse_genomes_project X 73659192 73663713 + MGP_CBAJ_P0095877 Srpk3 protein_coding protein_coding MGP_CBAJ_T0095878.1 MGP_CBAJ_G0035465.1 mouse_genomes_project X 73662732 73663390 + Srpk3 protein_coding retained_intron MGP_CBAJ_T0095879.1 MGP_CBAJ_G0035465.1 mouse_genomes_project X 73662765 73663516 + Srpk3 protein_coding retained_intron MGP_CBAJ_T0094913.1 MGP_CBAJ_G0035156.1 mouse_genomes_project X 1051925 1058540 - MGP_CBAJ_P0094913 Bmp15 protein_coding protein_coding MGP_CBAJ_T0016609.1 MGP_CBAJ_G0014721.1 mouse_genomes_project X 162836567 162837474 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016484.1 MGP_CBAJ_G0014596.1 mouse_genomes_project X 138170869 138171903 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099687.1 MGP_CBAJ_G0037942.1 mouse_genomes_project X 103504605 103504668 + Gm24577 snRNA snRNA MGP_CBAJ_T0095331.1 MGP_CBAJ_G0035273.1 mouse_genomes_project X 32479636 32541667 + MGP_CBAJ_P0095331 Il13ra1 protein_coding protein_coding MGP_CBAJ_T0097167.1 MGP_CBAJ_G0035819.1 mouse_genomes_project X 156837212 156878899 - MGP_CBAJ_P0097167 Tmem29 protein_coding protein_coding MGP_CBAJ_T0097168.1 MGP_CBAJ_G0035819.1 mouse_genomes_project X 156837212 156896165 - MGP_CBAJ_P0097168 Tmem29 protein_coding protein_coding MGP_CBAJ_T0097169.1 MGP_CBAJ_G0035819.1 mouse_genomes_project X 156838234 156896165 - Tmem29 protein_coding processed_transcript MGP_CBAJ_T0097170.1 MGP_CBAJ_G0035819.1 mouse_genomes_project X 156847984 156896169 - Tmem29 protein_coding processed_transcript MGP_CBAJ_T0097171.1 MGP_CBAJ_G0035819.1 mouse_genomes_project X 156847984 156878868 - Tmem29 protein_coding processed_transcript MGP_CBAJ_T0097172.1 MGP_CBAJ_G0035819.1 mouse_genomes_project X 156847990 156878667 - MGP_CBAJ_P0097172 Tmem29 protein_coding protein_coding MGP_CBAJ_T0097173.1 MGP_CBAJ_G0035819.1 mouse_genomes_project X 156848326 156896169 - Tmem29 protein_coding processed_transcript MGP_CBAJ_T0097174.1 MGP_CBAJ_G0035819.1 mouse_genomes_project X 156848512 156873284 - Tmem29 protein_coding processed_transcript MGP_CBAJ_T0097175.1 MGP_CBAJ_G0035819.1 mouse_genomes_project X 156848577 156878667 - Tmem29 protein_coding processed_transcript MGP_CBAJ_T0097176.1 MGP_CBAJ_G0035819.1 mouse_genomes_project X 156856368 156896169 - Tmem29 protein_coding retained_intron MGP_CBAJ_T0097177.1 MGP_CBAJ_G0035819.1 mouse_genomes_project X 156874910 156878925 - Tmem29 protein_coding processed_transcript MGP_CBAJ_T0097178.1 MGP_CBAJ_G0035819.1 mouse_genomes_project X 156875715 156878551 - Tmem29 protein_coding processed_transcript MGP_CBAJ_T0016125.1 MGP_CBAJ_G0014237.1 mouse_genomes_project X 59582979 59583704 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0096807.1 MGP_CBAJ_G0035707.1 mouse_genomes_project X 132907407 132909271 + MGP_CBAJ_P0096807 Rbm31y protein_coding protein_coding MGP_CBAJ_T0016090.1 MGP_CBAJ_G0014202.1 mouse_genomes_project X 50604837 50605328 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096632.1 MGP_CBAJ_G0035649.1 mouse_genomes_project X 108774701 108785297 + MGP_CBAJ_P0096632 Fgf16 protein_coding protein_coding MGP_CBAJ_T0016267.1 MGP_CBAJ_G0014379.1 mouse_genomes_project X 92783895 92784919 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095666.1 MGP_CBAJ_G0035393.1 mouse_genomes_project X 55509027 55522287 + MGP_CBAJ_P0095666 Cd40lg protein_coding protein_coding MGP_CBAJ_T0018346.1 MGP_CBAJ_G0015512.1 mouse_genomes_project X 15052423 15062668 - Gm14636 processed_transcript processed_transcript MGP_CBAJ_T0018347.1 MGP_CBAJ_G0015512.1 mouse_genomes_project X 15057489 15062677 - Gm14636 processed_transcript processed_transcript MGP_CBAJ_T0095550.1 MGP_CBAJ_G0035345.1 mouse_genomes_project X 46167711 46193865 + MGP_CBAJ_P0095550 Rbmx2 protein_coding protein_coding MGP_CBAJ_T0095551.1 MGP_CBAJ_G0035345.1 mouse_genomes_project X 46189602 46192379 + Rbmx2 protein_coding processed_transcript MGP_CBAJ_T0011024.1 MGP_CBAJ_G0009162.1 mouse_genomes_project X 54820989 54821052 - Mir5116 miRNA miRNA MGP_CBAJ_T0096788.1 MGP_CBAJ_G0035697.1 mouse_genomes_project X 122519474 122520535 - MGP_CBAJ_P0096788 Tgif2lx2 protein_coding protein_coding MGP_CBAJ_T0096002.1 MGP_CBAJ_G0035480.1 mouse_genomes_project X 74169610 74198303 - MGP_CBAJ_P0096002 Flna protein_coding protein_coding MGP_CBAJ_T0096003.1 MGP_CBAJ_G0035480.1 mouse_genomes_project X 74169610 74192383 - MGP_CBAJ_P0096003 Flna protein_coding nonsense_mediated_decay MGP_CBAJ_T0096004.1 MGP_CBAJ_G0035480.1 mouse_genomes_project X 74169612 74192519 - MGP_CBAJ_P0096004 Flna protein_coding protein_coding MGP_CBAJ_T0096005.1 MGP_CBAJ_G0035480.1 mouse_genomes_project X 74169690 74192540 - MGP_CBAJ_P0096005 Flna protein_coding protein_coding MGP_CBAJ_T0096006.1 MGP_CBAJ_G0035480.1 mouse_genomes_project X 74169938 74192349 - MGP_CBAJ_P0096006 Flna protein_coding protein_coding MGP_CBAJ_T0096007.1 MGP_CBAJ_G0035480.1 mouse_genomes_project X 74170959 74172629 - Flna protein_coding processed_transcript MGP_CBAJ_T0096008.1 MGP_CBAJ_G0035480.1 mouse_genomes_project X 74170983 74172939 - Flna protein_coding retained_intron MGP_CBAJ_T0096009.1 MGP_CBAJ_G0035480.1 mouse_genomes_project X 74172597 74173770 - Flna protein_coding retained_intron MGP_CBAJ_T0096010.1 MGP_CBAJ_G0035480.1 mouse_genomes_project X 74173021 74174639 - MGP_CBAJ_P0096010 Flna protein_coding protein_coding MGP_CBAJ_T0096011.1 MGP_CBAJ_G0035480.1 mouse_genomes_project X 74173386 74174118 - Flna protein_coding retained_intron MGP_CBAJ_T0096012.1 MGP_CBAJ_G0035480.1 mouse_genomes_project X 74174001 74175213 - MGP_CBAJ_P0096012 Flna protein_coding nonsense_mediated_decay MGP_CBAJ_T0096013.1 MGP_CBAJ_G0035480.1 mouse_genomes_project X 74174235 74174949 - Flna protein_coding retained_intron MGP_CBAJ_T0096014.1 MGP_CBAJ_G0035480.1 mouse_genomes_project X 74174529 74176720 - MGP_CBAJ_P0096014 Flna protein_coding protein_coding MGP_CBAJ_T0096015.1 MGP_CBAJ_G0035480.1 mouse_genomes_project X 74176845 74182113 - Flna protein_coding processed_transcript MGP_CBAJ_T0096016.1 MGP_CBAJ_G0035480.1 mouse_genomes_project X 74182231 74183901 - Flna protein_coding processed_transcript MGP_CBAJ_T0095048.1 MGP_CBAJ_G0035185.1 mouse_genomes_project X 2758953 2763542 + MGP_CBAJ_P0095048 Pcsk1n protein_coding protein_coding MGP_CBAJ_T0096448.1 MGP_CBAJ_G0035596.1 mouse_genomes_project X 103056715 103061423 - MGP_CBAJ_P0096448 P2ry4 protein_coding protein_coding MGP_CBAJ_T0101229.1 MGP_CBAJ_G0039377.1 mouse_genomes_project X 156654727 156655697 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0016284.1 MGP_CBAJ_G0014396.1 mouse_genomes_project X 95856118 95856885 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0096573.1 MGP_CBAJ_G0035623.1 mouse_genomes_project X 104848628 104853075 - MGP_CBAJ_P0096573 Rps4x protein_coding protein_coding MGP_CBAJ_T0096574.1 MGP_CBAJ_G0035623.1 mouse_genomes_project X 104848754 104850418 - Rps4x protein_coding retained_intron MGP_CBAJ_T0096575.1 MGP_CBAJ_G0035623.1 mouse_genomes_project X 104851307 104853017 - Rps4x protein_coding retained_intron MGP_CBAJ_T0102251.1 MGP_CBAJ_G0040280.1 mouse_genomes_project X 76535437 76536397 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0095936.1 MGP_CBAJ_G0035472.1 mouse_genomes_project X 73838226 73841216 - Naa10 protein_coding processed_transcript MGP_CBAJ_T0095937.1 MGP_CBAJ_G0035472.1 mouse_genomes_project X 73838226 73843297 - MGP_CBAJ_P0095937 Naa10 protein_coding protein_coding MGP_CBAJ_T0095938.1 MGP_CBAJ_G0035472.1 mouse_genomes_project X 73838228 73843277 - MGP_CBAJ_P0095938 Naa10 protein_coding protein_coding MGP_CBAJ_T0095939.1 MGP_CBAJ_G0035472.1 mouse_genomes_project X 73838240 73843241 - MGP_CBAJ_P0095939 Naa10 protein_coding protein_coding MGP_CBAJ_T0095940.1 MGP_CBAJ_G0035472.1 mouse_genomes_project X 73838249 73843237 - MGP_CBAJ_P0095940 Naa10 protein_coding protein_coding MGP_CBAJ_T0095941.1 MGP_CBAJ_G0035472.1 mouse_genomes_project X 73838273 73843185 - MGP_CBAJ_P0095941 Naa10 protein_coding protein_coding MGP_CBAJ_T0095942.1 MGP_CBAJ_G0035472.1 mouse_genomes_project X 73838445 73841258 - Naa10 protein_coding processed_transcript MGP_CBAJ_T0095943.1 MGP_CBAJ_G0035472.1 mouse_genomes_project X 73838827 73843181 - MGP_CBAJ_P0095943 Naa10 protein_coding protein_coding MGP_CBAJ_T0095944.1 MGP_CBAJ_G0035472.1 mouse_genomes_project X 73839214 73841816 - Naa10 protein_coding retained_intron MGP_CBAJ_T0095945.1 MGP_CBAJ_G0035472.1 mouse_genomes_project X 73839422 73843259 - Naa10 protein_coding retained_intron MGP_CBAJ_T0095946.1 MGP_CBAJ_G0035472.1 mouse_genomes_project X 73842329 73843208 - Naa10 protein_coding retained_intron MGP_CBAJ_T0095947.1 MGP_CBAJ_G0035472.1 mouse_genomes_project X 73842465 73843205 - Naa10 protein_coding retained_intron MGP_CBAJ_T0015999.1 MGP_CBAJ_G0014111.1 mouse_genomes_project X 14186091 14186248 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016218.1 MGP_CBAJ_G0014330.1 mouse_genomes_project X 79288183 79288405 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099684.1 MGP_CBAJ_G0037939.1 mouse_genomes_project X 89374977 89375084 + Gm25006 snRNA snRNA MGP_CBAJ_T0016411.1 MGP_CBAJ_G0014523.1 mouse_genomes_project X 116458128 116458336 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097626.1 MGP_CBAJ_G0035923.1 mouse_genomes_project X 177875215 177879970 - MGP_CBAJ_P0097626 4933400A11Rik protein_coding protein_coding MGP_CBAJ_T0097627.1 MGP_CBAJ_G0035923.1 mouse_genomes_project X 177875336 177880013 - MGP_CBAJ_P0097627 4933400A11Rik protein_coding protein_coding MGP_CBAJ_T0097628.1 MGP_CBAJ_G0035923.1 mouse_genomes_project X 177875383 177879935 - MGP_CBAJ_P0097628 4933400A11Rik protein_coding protein_coding MGP_CBAJ_T0096198.1 MGP_CBAJ_G0035514.1 mouse_genomes_project X 75681708 75687894 - MGP_CBAJ_P0096198 Rab39b protein_coding protein_coding MGP_CBAJ_T0100977.1 MGP_CBAJ_G0039232.1 mouse_genomes_project X 170245648 170245769 + Gm23786 snoRNA snoRNA MGP_CBAJ_T0016506.1 MGP_CBAJ_G0014618.1 mouse_genomes_project X 142502833 142503955 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099699.1 MGP_CBAJ_G0037954.1 mouse_genomes_project X 114102750 114102941 - Gm26108 snRNA snRNA MGP_CBAJ_T0016007.1 MGP_CBAJ_G0014119.1 mouse_genomes_project X 16333258 16333664 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002441.1 MGP_CBAJ_G0002353.1 mouse_genomes_project X 106620665 106622677 - TEC TEC MGP_CBAJ_T0095728.1 MGP_CBAJ_G0035419.1 mouse_genomes_project X 68038586 68077441 + MGP_CBAJ_P0095728 Fmr1 protein_coding protein_coding MGP_CBAJ_T0095729.1 MGP_CBAJ_G0035419.1 mouse_genomes_project X 68038627 68052332 + Fmr1 protein_coding retained_intron MGP_CBAJ_T0095730.1 MGP_CBAJ_G0035419.1 mouse_genomes_project X 68038627 68066467 + Fmr1 protein_coding retained_intron MGP_CBAJ_T0095731.1 MGP_CBAJ_G0035419.1 mouse_genomes_project X 68038627 68068327 + Fmr1 protein_coding retained_intron MGP_CBAJ_T0095732.1 MGP_CBAJ_G0035419.1 mouse_genomes_project X 68038627 68040151 + Fmr1 protein_coding processed_transcript MGP_CBAJ_T0095733.1 MGP_CBAJ_G0035419.1 mouse_genomes_project X 68038669 68077441 + MGP_CBAJ_P0095733 Fmr1 protein_coding protein_coding MGP_CBAJ_T0095734.1 MGP_CBAJ_G0035419.1 mouse_genomes_project X 68038847 68077441 + MGP_CBAJ_P0095734 Fmr1 protein_coding protein_coding MGP_CBAJ_T0095735.1 MGP_CBAJ_G0035419.1 mouse_genomes_project X 68038847 68077441 + MGP_CBAJ_P0095735 Fmr1 protein_coding protein_coding MGP_CBAJ_T0095736.1 MGP_CBAJ_G0035419.1 mouse_genomes_project X 68038856 68077441 + MGP_CBAJ_P0095736 Fmr1 protein_coding protein_coding MGP_CBAJ_T0095737.1 MGP_CBAJ_G0035419.1 mouse_genomes_project X 68038862 68077441 + MGP_CBAJ_P0095737 Fmr1 protein_coding protein_coding MGP_CBAJ_T0095738.1 MGP_CBAJ_G0035419.1 mouse_genomes_project X 68054371 68065764 + Fmr1 protein_coding retained_intron MGP_CBAJ_T0095739.1 MGP_CBAJ_G0035419.1 mouse_genomes_project X 68057235 68057909 + Fmr1 protein_coding retained_intron MGP_CBAJ_T0095740.1 MGP_CBAJ_G0035419.1 mouse_genomes_project X 68071300 68072773 + Fmr1 protein_coding retained_intron MGP_CBAJ_T0097220.1 MGP_CBAJ_G0035825.1 mouse_genomes_project X 157455812 157498695 - MGP_CBAJ_P0097220 Gnl3l protein_coding protein_coding MGP_CBAJ_T0097221.1 MGP_CBAJ_G0035825.1 mouse_genomes_project X 157455812 157498695 - MGP_CBAJ_P0097221 Gnl3l protein_coding protein_coding MGP_CBAJ_T0097222.1 MGP_CBAJ_G0035825.1 mouse_genomes_project X 157461482 157467583 - Gnl3l protein_coding retained_intron MGP_CBAJ_T0097223.1 MGP_CBAJ_G0035825.1 mouse_genomes_project X 157473472 157476761 - Gnl3l protein_coding retained_intron MGP_CBAJ_T0097224.1 MGP_CBAJ_G0035825.1 mouse_genomes_project X 157473842 157498695 - MGP_CBAJ_P0097224 Gnl3l protein_coding protein_coding MGP_CBAJ_T0097225.1 MGP_CBAJ_G0035825.1 mouse_genomes_project X 157479191 157498695 - MGP_CBAJ_P0097225 Gnl3l protein_coding nonsense_mediated_decay MGP_CBAJ_T0097226.1 MGP_CBAJ_G0035825.1 mouse_genomes_project X 157479235 157498695 - MGP_CBAJ_P0097226 Gnl3l protein_coding protein_coding MGP_CBAJ_T0016149.1 MGP_CBAJ_G0014261.1 mouse_genomes_project X 65237137 65237395 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009290.1 MGP_CBAJ_G0007450.1 mouse_genomes_project X 96729777 96735433 + Gm26617 lincRNA lincRNA MGP_CBAJ_T0096691.1 MGP_CBAJ_G0035662.1 mouse_genomes_project X 110076583 110089828 + MGP_CBAJ_P0096691 Lpar4 protein_coding protein_coding MGP_CBAJ_T0016646.1 MGP_CBAJ_G0014758.1 mouse_genomes_project X 170358753 170359195 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016114.1 MGP_CBAJ_G0014226.1 mouse_genomes_project X 57653228 57653904 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011056.1 MGP_CBAJ_G0009194.1 mouse_genomes_project X 73955104 73955192 - Mir718 miRNA miRNA MGP_CBAJ_T0015972.1 MGP_CBAJ_G0014084.1 mouse_genomes_project X 7234265 7234464 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0095792.1 MGP_CBAJ_G0035433.1 mouse_genomes_project X 71312188 71319548 + MGP_CBAJ_P0095792 Gpr50 protein_coding protein_coding MGP_CBAJ_T0095793.1 MGP_CBAJ_G0035433.1 mouse_genomes_project X 71312487 71317683 + Gpr50 protein_coding processed_transcript MGP_CBAJ_T0095794.1 MGP_CBAJ_G0035433.1 mouse_genomes_project X 71312487 71317683 + Gpr50 protein_coding processed_transcript MGP_CBAJ_T0095512.1 MGP_CBAJ_G0035336.1 mouse_genomes_project X 45575792 45614081 - MGP_CBAJ_P0095512 Zdhhc9 protein_coding protein_coding MGP_CBAJ_T0095513.1 MGP_CBAJ_G0035336.1 mouse_genomes_project X 45575792 45613890 - MGP_CBAJ_P0095513 Zdhhc9 protein_coding protein_coding MGP_CBAJ_T0095514.1 MGP_CBAJ_G0035336.1 mouse_genomes_project X 45585095 45613868 - Zdhhc9 protein_coding retained_intron MGP_CBAJ_T0095515.1 MGP_CBAJ_G0035336.1 mouse_genomes_project X 45595254 45613805 - Zdhhc9 protein_coding retained_intron MGP_CBAJ_T0095516.1 MGP_CBAJ_G0035336.1 mouse_genomes_project X 45606922 45613531 - Zdhhc9 protein_coding processed_transcript MGP_CBAJ_T0095517.1 MGP_CBAJ_G0035336.1 mouse_genomes_project X 45611870 45613861 - Zdhhc9 protein_coding processed_transcript MGP_CBAJ_T0100951.1 MGP_CBAJ_G0039206.1 mouse_genomes_project X 107550194 107550301 + Gm22430 snoRNA snoRNA MGP_CBAJ_T0011102.1 MGP_CBAJ_G0009240.1 mouse_genomes_project X 174873864 174873992 + Gm44376 miRNA miRNA MGP_CBAJ_T0007357.1 MGP_CBAJ_G0006026.1 mouse_genomes_project 3 11441573 11442711 + lincRNA lincRNA MGP_CBAJ_T0007358.1 MGP_CBAJ_G0006026.1 mouse_genomes_project 3 11441600 11442712 + lincRNA lincRNA MGP_CBAJ_T0007359.1 MGP_CBAJ_G0006026.1 mouse_genomes_project 3 11441646 11442499 + lincRNA lincRNA MGP_CBAJ_T0007360.1 MGP_CBAJ_G0006026.1 mouse_genomes_project 3 11441824 11444515 + lincRNA lincRNA MGP_CBAJ_T0014017.1 MGP_CBAJ_G0012129.1 mouse_genomes_project 3 107926603 107926837 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061726.1 MGP_CBAJ_G0027169.1 mouse_genomes_project 3 97613749 97614807 + MGP_CBAJ_P0061726 S100a8 protein_coding protein_coding MGP_CBAJ_T0061727.1 MGP_CBAJ_G0027169.1 mouse_genomes_project 3 97614082 97614736 + S100a8 protein_coding retained_intron MGP_CBAJ_T0063153.1 MGP_CBAJ_G0027518.1 mouse_genomes_project 3 134109183 134113617 + MGP_CBAJ_P0063153 Fabp2 protein_coding protein_coding MGP_CBAJ_T0060696.1 MGP_CBAJ_G0026965.1 mouse_genomes_project 3 69310869 69331657 + MGP_CBAJ_P0060696 Lekr1 protein_coding protein_coding MGP_CBAJ_T0060697.1 MGP_CBAJ_G0026965.1 mouse_genomes_project 3 69310876 69329702 + Lekr1 protein_coding processed_transcript MGP_CBAJ_T0060698.1 MGP_CBAJ_G0026965.1 mouse_genomes_project 3 69310887 69392009 + Lekr1 protein_coding processed_transcript MGP_CBAJ_T0060699.1 MGP_CBAJ_G0026965.1 mouse_genomes_project 3 69310909 69313078 + Lekr1 protein_coding retained_intron MGP_CBAJ_T0060700.1 MGP_CBAJ_G0026965.1 mouse_genomes_project 3 69310923 69426626 + Lekr1 protein_coding processed_transcript MGP_CBAJ_T0060701.1 MGP_CBAJ_G0026965.1 mouse_genomes_project 3 69310958 69380872 + Lekr1 protein_coding processed_transcript MGP_CBAJ_T0060702.1 MGP_CBAJ_G0026965.1 mouse_genomes_project 3 69329530 69486237 + Lekr1 protein_coding processed_transcript MGP_CBAJ_T0060087.1 MGP_CBAJ_G0026843.1 mouse_genomes_project 3 36069215 36071123 + Atp11b protein_coding retained_intron MGP_CBAJ_T0060088.1 MGP_CBAJ_G0026843.1 mouse_genomes_project 3 36069243 36147735 + Atp11b protein_coding processed_transcript MGP_CBAJ_T0060089.1 MGP_CBAJ_G0026843.1 mouse_genomes_project 3 36069243 36179872 + Atp11b protein_coding retained_intron MGP_CBAJ_T0060090.1 MGP_CBAJ_G0026843.1 mouse_genomes_project 3 36069243 36179877 + MGP_CBAJ_P0060090 Atp11b protein_coding protein_coding MGP_CBAJ_T0060091.1 MGP_CBAJ_G0026843.1 mouse_genomes_project 3 36104392 36123242 + MGP_CBAJ_P0060091 Atp11b protein_coding protein_coding MGP_CBAJ_T0060092.1 MGP_CBAJ_G0026843.1 mouse_genomes_project 3 36105883 36179875 + MGP_CBAJ_P0060092 Atp11b protein_coding protein_coding MGP_CBAJ_T0060093.1 MGP_CBAJ_G0026843.1 mouse_genomes_project 3 36124115 36126555 + Atp11b protein_coding processed_transcript MGP_CBAJ_T0060094.1 MGP_CBAJ_G0026843.1 mouse_genomes_project 3 36156832 36179872 + Atp11b protein_coding retained_intron MGP_CBAJ_T0060095.1 MGP_CBAJ_G0026843.1 mouse_genomes_project 3 36157165 36179877 + MGP_CBAJ_P0060095 Atp11b protein_coding protein_coding MGP_CBAJ_T0001170.1 MGP_CBAJ_G0001097.1 mouse_genomes_project 3 55362672 55365770 - TEC TEC MGP_CBAJ_T0059864.1 MGP_CBAJ_G0026804.1 mouse_genomes_project 3 27326042 27361722 - MGP_CBAJ_P0059864 Tmem212 protein_coding protein_coding MGP_CBAJ_T0063753.1 MGP_CBAJ_G0027634.1 mouse_genomes_project 3 158941361 158945155 + Odf2l protein_coding retained_intron MGP_CBAJ_T0063754.1 MGP_CBAJ_G0027634.1 mouse_genomes_project 3 158941362 158984553 + MGP_CBAJ_P0063754 Odf2l protein_coding protein_coding MGP_CBAJ_T0063755.1 MGP_CBAJ_G0027634.1 mouse_genomes_project 3 158941362 158984573 + MGP_CBAJ_P0063755 Odf2l protein_coding protein_coding MGP_CBAJ_T0063756.1 MGP_CBAJ_G0027634.1 mouse_genomes_project 3 158941373 158960386 + Odf2l protein_coding retained_intron MGP_CBAJ_T0063757.1 MGP_CBAJ_G0027634.1 mouse_genomes_project 3 158941373 158984543 + MGP_CBAJ_P0063757 Odf2l protein_coding protein_coding MGP_CBAJ_T0063758.1 MGP_CBAJ_G0027634.1 mouse_genomes_project 3 158941381 158960297 + Odf2l protein_coding retained_intron MGP_CBAJ_T0063759.1 MGP_CBAJ_G0027634.1 mouse_genomes_project 3 158941393 158984547 + MGP_CBAJ_P0063759 Odf2l protein_coding protein_coding MGP_CBAJ_T0063760.1 MGP_CBAJ_G0027634.1 mouse_genomes_project 3 158941394 158952016 + MGP_CBAJ_P0063760 Odf2l protein_coding nonsense_mediated_decay MGP_CBAJ_T0063761.1 MGP_CBAJ_G0027634.1 mouse_genomes_project 3 158941747 158942403 + Odf2l protein_coding processed_transcript MGP_CBAJ_T0063762.1 MGP_CBAJ_G0027634.1 mouse_genomes_project 3 158941747 158949117 + MGP_CBAJ_P0063762 Odf2l protein_coding protein_coding MGP_CBAJ_T0063763.1 MGP_CBAJ_G0027634.1 mouse_genomes_project 3 158943419 158952008 + MGP_CBAJ_P0063763 Odf2l protein_coding protein_coding MGP_CBAJ_T0063764.1 MGP_CBAJ_G0027634.1 mouse_genomes_project 3 158950832 158969429 + MGP_CBAJ_P0063764 Odf2l protein_coding protein_coding MGP_CBAJ_T0063765.1 MGP_CBAJ_G0027634.1 mouse_genomes_project 3 158955625 158979616 + Odf2l protein_coding retained_intron MGP_CBAJ_T0063766.1 MGP_CBAJ_G0027634.1 mouse_genomes_project 3 158962632 158979616 + Odf2l protein_coding retained_intron MGP_CBAJ_T0063767.1 MGP_CBAJ_G0027634.1 mouse_genomes_project 3 158962841 158972623 + Odf2l protein_coding processed_transcript MGP_CBAJ_T0063768.1 MGP_CBAJ_G0027634.1 mouse_genomes_project 3 158962850 158984551 + Odf2l protein_coding retained_intron MGP_CBAJ_T0063769.1 MGP_CBAJ_G0027634.1 mouse_genomes_project 3 158962872 158979568 + MGP_CBAJ_P0063769 Odf2l protein_coding protein_coding MGP_CBAJ_T0063770.1 MGP_CBAJ_G0027634.1 mouse_genomes_project 3 158979556 158984284 + MGP_CBAJ_P0063770 Odf2l protein_coding nonsense_mediated_decay MGP_CBAJ_T0062625.1 MGP_CBAJ_G0027402.1 mouse_genomes_project 3 115101006 115107592 + Wdr77 protein_coding retained_intron MGP_CBAJ_T0062626.1 MGP_CBAJ_G0027402.1 mouse_genomes_project 3 115101012 115111536 + MGP_CBAJ_P0062626 Wdr77 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062627.1 MGP_CBAJ_G0027402.1 mouse_genomes_project 3 115101082 115108822 + MGP_CBAJ_P0062627 Wdr77 protein_coding protein_coding MGP_CBAJ_T0062628.1 MGP_CBAJ_G0027402.1 mouse_genomes_project 3 115105948 115107051 + Wdr77 protein_coding retained_intron MGP_CBAJ_T0013860.1 MGP_CBAJ_G0011972.1 mouse_genomes_project 3 56036417 56036883 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013966.1 MGP_CBAJ_G0012078.1 mouse_genomes_project 3 93363194 93364141 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013808.1 MGP_CBAJ_G0011920.1 mouse_genomes_project 3 37578244 37579340 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099166.1 MGP_CBAJ_G0037421.1 mouse_genomes_project 3 60786718 60786818 - Gm24531 snRNA snRNA MGP_CBAJ_T0059741.1 MGP_CBAJ_G0026778.1 mouse_genomes_project 3 16557628 16560972 + MGP_CBAJ_P0059741 Bhlhe22 protein_coding protein_coding MGP_CBAJ_T0063795.1 MGP_CBAJ_G0027641.1 mouse_genomes_project 3 159947659 159985511 + MGP_CBAJ_P0063795 Syde2 protein_coding protein_coding MGP_CBAJ_T0063796.1 MGP_CBAJ_G0027641.1 mouse_genomes_project 3 159948442 159985511 + MGP_CBAJ_P0063796 Syde2 protein_coding protein_coding MGP_CBAJ_T0063797.1 MGP_CBAJ_G0027641.1 mouse_genomes_project 3 159948592 159984389 + MGP_CBAJ_P0063797 Syde2 protein_coding unknown_likely_coding MGP_CBAJ_T0063798.1 MGP_CBAJ_G0027641.1 mouse_genomes_project 3 159954153 159958825 + Syde2 protein_coding processed_transcript MGP_CBAJ_T0098356.1 MGP_CBAJ_G0036622.1 mouse_genomes_project 3 113099356 113101013 - Gm42701 sense_intronic sense_intronic MGP_CBAJ_T0001235.1 MGP_CBAJ_G0001162.1 mouse_genomes_project 3 105465996 105467185 - TEC TEC MGP_CBAJ_T0061776.1 MGP_CBAJ_G0027211.1 mouse_genomes_project 3 100266009 100266953 - MGP_CBAJ_P0061776 Lce3a protein_coding protein_coding MGP_CBAJ_T0061980.1 MGP_CBAJ_G0027258.1 mouse_genomes_project 3 103116687 103124524 - MGP_CBAJ_P0061980 Gm128 protein_coding protein_coding MGP_CBAJ_T0061981.1 MGP_CBAJ_G0027258.1 mouse_genomes_project 3 103116874 103124524 - MGP_CBAJ_P0061981 Gm128 protein_coding protein_coding MGP_CBAJ_T0061407.1 MGP_CBAJ_G0027111.1 mouse_genomes_project 3 95975675 95980489 - MGP_CBAJ_P0061407 Mtx1 protein_coding protein_coding MGP_CBAJ_T0061408.1 MGP_CBAJ_G0027111.1 mouse_genomes_project 3 95975677 95981026 - MGP_CBAJ_P0061408 Mtx1 protein_coding protein_coding MGP_CBAJ_T0061409.1 MGP_CBAJ_G0027111.1 mouse_genomes_project 3 95975682 95976931 - MGP_CBAJ_P0061409 Mtx1 protein_coding protein_coding MGP_CBAJ_T0061410.1 MGP_CBAJ_G0027111.1 mouse_genomes_project 3 95975683 95976261 - Mtx1 protein_coding retained_intron MGP_CBAJ_T0061411.1 MGP_CBAJ_G0027111.1 mouse_genomes_project 3 95975683 95976689 - Mtx1 protein_coding processed_transcript MGP_CBAJ_T0061412.1 MGP_CBAJ_G0027111.1 mouse_genomes_project 3 95975683 95980953 - MGP_CBAJ_P0061412 Mtx1 protein_coding protein_coding MGP_CBAJ_T0061413.1 MGP_CBAJ_G0027111.1 mouse_genomes_project 3 95975685 95976716 - MGP_CBAJ_P0061413 Mtx1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061414.1 MGP_CBAJ_G0027111.1 mouse_genomes_project 3 95975688 95980503 - MGP_CBAJ_P0061414 Mtx1 protein_coding protein_coding MGP_CBAJ_T0061415.1 MGP_CBAJ_G0027111.1 mouse_genomes_project 3 95975809 95980436 - MGP_CBAJ_P0061415 Mtx1 protein_coding protein_coding MGP_CBAJ_T0061416.1 MGP_CBAJ_G0027111.1 mouse_genomes_project 3 95975924 95980508 - MGP_CBAJ_P0061416 Mtx1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061417.1 MGP_CBAJ_G0027111.1 mouse_genomes_project 3 95975952 95993516 - MGP_CBAJ_P0061417 Mtx1 protein_coding protein_coding MGP_CBAJ_T0061418.1 MGP_CBAJ_G0027111.1 mouse_genomes_project 3 95976010 95977431 - Mtx1 protein_coding retained_intron MGP_CBAJ_T0061419.1 MGP_CBAJ_G0027111.1 mouse_genomes_project 3 95976242 95977318 - Mtx1 protein_coding retained_intron MGP_CBAJ_T0061420.1 MGP_CBAJ_G0027111.1 mouse_genomes_project 3 95976339 95980458 - Mtx1 protein_coding retained_intron MGP_CBAJ_T0061421.1 MGP_CBAJ_G0027111.1 mouse_genomes_project 3 95976626 95980481 - MGP_CBAJ_P0061421 Mtx1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061422.1 MGP_CBAJ_G0027111.1 mouse_genomes_project 3 95976854 95980473 - Mtx1 protein_coding retained_intron MGP_CBAJ_T0061423.1 MGP_CBAJ_G0027111.1 mouse_genomes_project 3 95977270 95980422 - MGP_CBAJ_P0061423 Mtx1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061430.1 MGP_CBAJ_G0027111.1 mouse_genomes_project 3 95990563 95993552 - Mtx1 protein_coding processed_transcript MGP_CBAJ_T0062419.1 MGP_CBAJ_G0027362.1 mouse_genomes_project 3 111732831 111761974 - MGP_CBAJ_P0062419 Nr1h5 protein_coding protein_coding MGP_CBAJ_T0062420.1 MGP_CBAJ_G0027362.1 mouse_genomes_project 3 111734043 111753997 - MGP_CBAJ_P0062420 Nr1h5 protein_coding protein_coding MGP_CBAJ_T0062421.1 MGP_CBAJ_G0027362.1 mouse_genomes_project 3 111734043 111753997 - MGP_CBAJ_P0062421 Nr1h5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062422.1 MGP_CBAJ_G0027362.1 mouse_genomes_project 3 111734043 111753997 - MGP_CBAJ_P0062422 Nr1h5 protein_coding protein_coding MGP_CBAJ_T0062423.1 MGP_CBAJ_G0027362.1 mouse_genomes_project 3 111734043 111753997 - MGP_CBAJ_P0062423 Nr1h5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0099223.1 MGP_CBAJ_G0037478.1 mouse_genomes_project 3 150546154 150546259 + Gm25080 snRNA snRNA MGP_CBAJ_T0063853.1 MGP_CBAJ_G0027655.1 mouse_genomes_project 3 160807934 160897350 - MGP_CBAJ_P0063853 Prkacb protein_coding protein_coding MGP_CBAJ_T0063854.1 MGP_CBAJ_G0027655.1 mouse_genomes_project 3 160808225 160848780 - MGP_CBAJ_P0063854 Prkacb protein_coding protein_coding MGP_CBAJ_T0063855.1 MGP_CBAJ_G0027655.1 mouse_genomes_project 3 160808225 160849300 - MGP_CBAJ_P0063855 Prkacb protein_coding protein_coding MGP_CBAJ_T0063856.1 MGP_CBAJ_G0027655.1 mouse_genomes_project 3 160808227 160859929 - MGP_CBAJ_P0063856 Prkacb protein_coding protein_coding MGP_CBAJ_T0063857.1 MGP_CBAJ_G0027655.1 mouse_genomes_project 3 160810688 160824135 - Prkacb protein_coding retained_intron MGP_CBAJ_T0063858.1 MGP_CBAJ_G0027655.1 mouse_genomes_project 3 160826480 160871295 - MGP_CBAJ_P0063858 Prkacb protein_coding protein_coding MGP_CBAJ_T0063859.1 MGP_CBAJ_G0027655.1 mouse_genomes_project 3 160826480 160843089 - MGP_CBAJ_P0063859 Prkacb protein_coding protein_coding MGP_CBAJ_T0063860.1 MGP_CBAJ_G0027655.1 mouse_genomes_project 3 160893907 160897380 - Prkacb protein_coding retained_intron MGP_CBAJ_T0060557.1 MGP_CBAJ_G0026928.1 mouse_genomes_project 3 61446029 61489213 + MGP_CBAJ_P0060557 Eif2a protein_coding protein_coding MGP_CBAJ_T0060558.1 MGP_CBAJ_G0026928.1 mouse_genomes_project 3 61446250 61471820 + Eif2a protein_coding retained_intron MGP_CBAJ_T0060559.1 MGP_CBAJ_G0026928.1 mouse_genomes_project 3 61446251 61487354 + MGP_CBAJ_P0060559 Eif2a protein_coding nonsense_mediated_decay MGP_CBAJ_T0060560.1 MGP_CBAJ_G0026928.1 mouse_genomes_project 3 61446264 61489213 + MGP_CBAJ_P0060560 Eif2a protein_coding nonsense_mediated_decay MGP_CBAJ_T0060561.1 MGP_CBAJ_G0026928.1 mouse_genomes_project 3 61446511 61471585 + MGP_CBAJ_P0060561 Eif2a protein_coding protein_coding MGP_CBAJ_T0060562.1 MGP_CBAJ_G0026928.1 mouse_genomes_project 3 61469108 61471820 + Eif2a protein_coding retained_intron MGP_CBAJ_T0060563.1 MGP_CBAJ_G0026928.1 mouse_genomes_project 3 61470222 61482431 + Eif2a protein_coding retained_intron MGP_CBAJ_T0062594.1 MGP_CBAJ_G0027393.1 mouse_genomes_project 3 114118451 114132577 + MGP_CBAJ_P0062594 4930564D02Rik protein_coding protein_coding MGP_CBAJ_T0004303.1 MGP_CBAJ_G0003754.1 mouse_genomes_project 3 150976820 150987578 + Gm43691 antisense antisense MGP_CBAJ_T0062899.1 MGP_CBAJ_G0027471.1 mouse_genomes_project 3 119022755 119394599 + MGP_CBAJ_P0062899 Vav3 protein_coding protein_coding MGP_CBAJ_T0062900.1 MGP_CBAJ_G0027471.1 mouse_genomes_project 3 119022785 119272908 + Vav3 protein_coding retained_intron MGP_CBAJ_T0062901.1 MGP_CBAJ_G0027471.1 mouse_genomes_project 3 119023141 119394601 + MGP_CBAJ_P0062901 Vav3 protein_coding unknown_likely_coding MGP_CBAJ_T0062902.1 MGP_CBAJ_G0027471.1 mouse_genomes_project 3 119023208 119146981 + Vav3 protein_coding processed_transcript MGP_CBAJ_T0062903.1 MGP_CBAJ_G0027471.1 mouse_genomes_project 3 119204659 119213570 + Vav3 protein_coding processed_transcript MGP_CBAJ_T0062904.1 MGP_CBAJ_G0027471.1 mouse_genomes_project 3 119283267 119394595 + MGP_CBAJ_P0062904 Vav3 protein_coding protein_coding MGP_CBAJ_T0062905.1 MGP_CBAJ_G0027471.1 mouse_genomes_project 3 119358532 119391800 + Vav3 protein_coding processed_transcript MGP_CBAJ_T0100462.1 MGP_CBAJ_G0038717.1 mouse_genomes_project 3 92348880 92348948 - Snord73a snoRNA snoRNA MGP_CBAJ_T0013704.1 MGP_CBAJ_G0011816.1 mouse_genomes_project 3 619319 620093 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013777.1 MGP_CBAJ_G0011889.1 mouse_genomes_project 3 24357732 24357912 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061248.1 MGP_CBAJ_G0027087.1 mouse_genomes_project 3 95102128 95106588 - Lmna protein_coding retained_intron MGP_CBAJ_T0061249.1 MGP_CBAJ_G0027087.1 mouse_genomes_project 3 95103129 95131048 - MGP_CBAJ_P0061249 Lmna protein_coding protein_coding MGP_CBAJ_T0061250.1 MGP_CBAJ_G0027087.1 mouse_genomes_project 3 95103827 95131050 - Lmna protein_coding processed_transcript MGP_CBAJ_T0061251.1 MGP_CBAJ_G0027087.1 mouse_genomes_project 3 95104057 95104845 - Lmna protein_coding retained_intron MGP_CBAJ_T0061252.1 MGP_CBAJ_G0027087.1 mouse_genomes_project 3 95105185 95131020 - MGP_CBAJ_P0061252 Lmna protein_coding protein_coding MGP_CBAJ_T0061253.1 MGP_CBAJ_G0027087.1 mouse_genomes_project 3 95105186 95115293 - MGP_CBAJ_P0061253 Lmna protein_coding protein_coding MGP_CBAJ_T0061254.1 MGP_CBAJ_G0027087.1 mouse_genomes_project 3 95130465 95140052 - MGP_CBAJ_P0061254 Lmna protein_coding protein_coding MGP_CBAJ_T0014088.1 MGP_CBAJ_G0012200.1 mouse_genomes_project 3 130830680 130831488 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007632.1 MGP_CBAJ_G0006236.1 mouse_genomes_project 3 156575698 156592939 + 4930519L02Rik lincRNA lincRNA MGP_CBAJ_T0062050.1 MGP_CBAJ_G0027271.1 mouse_genomes_project 3 103621182 103625571 + MGP_CBAJ_P0062050 Mcl1 protein_coding protein_coding MGP_CBAJ_T0062051.1 MGP_CBAJ_G0027271.1 mouse_genomes_project 3 103621251 103623218 + MGP_CBAJ_P0062051 Mcl1 protein_coding protein_coding MGP_CBAJ_T0007442.1 MGP_CBAJ_G0006088.1 mouse_genomes_project 3 54741843 54778220 + Gm30173 lincRNA lincRNA MGP_CBAJ_T0007559.1 MGP_CBAJ_G0006176.1 mouse_genomes_project 3 117249322 117262553 - Gm36211 lincRNA lincRNA MGP_CBAJ_T0013820.1 MGP_CBAJ_G0011932.1 mouse_genomes_project 3 41373577 41373877 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011419.1 MGP_CBAJ_G0009557.1 mouse_genomes_project 3 109226065 109226327 - Gm23465 misc_RNA misc_RNA MGP_CBAJ_T0001214.1 MGP_CBAJ_G0001141.1 mouse_genomes_project 3 85636595 85638920 + TEC TEC MGP_CBAJ_T0014057.1 MGP_CBAJ_G0012169.1 mouse_genomes_project 3 118855153 118856018 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010396.1 MGP_CBAJ_G0008534.1 mouse_genomes_project 3 91594299 91594419 + Mir466k miRNA miRNA MGP_CBAJ_T0061050.1 MGP_CBAJ_G0027048.1 mouse_genomes_project 3 93077128 93246152 - MGP_CBAJ_P0061050 Dclk2 protein_coding protein_coding MGP_CBAJ_T0061051.1 MGP_CBAJ_G0027048.1 mouse_genomes_project 3 93077128 93246669 - MGP_CBAJ_P0061051 Dclk2 protein_coding protein_coding MGP_CBAJ_T0061052.1 MGP_CBAJ_G0027048.1 mouse_genomes_project 3 93077128 93246196 - MGP_CBAJ_P0061052 Dclk2 protein_coding protein_coding MGP_CBAJ_T0061053.1 MGP_CBAJ_G0027048.1 mouse_genomes_project 3 93077128 93246005 - MGP_CBAJ_P0061053 Dclk2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061054.1 MGP_CBAJ_G0027048.1 mouse_genomes_project 3 93081046 93245987 - MGP_CBAJ_P0061054 Dclk2 protein_coding protein_coding MGP_CBAJ_T0061055.1 MGP_CBAJ_G0027048.1 mouse_genomes_project 3 93081075 93086150 - Dclk2 protein_coding processed_transcript MGP_CBAJ_T0061056.1 MGP_CBAJ_G0027048.1 mouse_genomes_project 3 93081183 93092995 - Dclk2 protein_coding processed_transcript MGP_CBAJ_T0061057.1 MGP_CBAJ_G0027048.1 mouse_genomes_project 3 93083180 93091847 - Dclk2 protein_coding processed_transcript MGP_CBAJ_T0061058.1 MGP_CBAJ_G0027048.1 mouse_genomes_project 3 93092755 93246191 - MGP_CBAJ_P0061058 Dclk2 protein_coding protein_coding MGP_CBAJ_T0062430.1 MGP_CBAJ_G0027364.1 mouse_genomes_project 3 111818077 111860993 + MGP_CBAJ_P0062430 Csde1 protein_coding protein_coding MGP_CBAJ_T0062431.1 MGP_CBAJ_G0027364.1 mouse_genomes_project 3 111818216 111860991 + MGP_CBAJ_P0062431 Csde1 protein_coding protein_coding MGP_CBAJ_T0062432.1 MGP_CBAJ_G0027364.1 mouse_genomes_project 3 111818258 111860798 + MGP_CBAJ_P0062432 Csde1 protein_coding protein_coding MGP_CBAJ_T0062433.1 MGP_CBAJ_G0027364.1 mouse_genomes_project 3 111818263 111859955 + MGP_CBAJ_P0062433 Csde1 protein_coding protein_coding MGP_CBAJ_T0062434.1 MGP_CBAJ_G0027364.1 mouse_genomes_project 3 111818264 111860993 + MGP_CBAJ_P0062434 Csde1 protein_coding protein_coding MGP_CBAJ_T0062435.1 MGP_CBAJ_G0027364.1 mouse_genomes_project 3 111818271 111860507 + MGP_CBAJ_P0062435 Csde1 protein_coding protein_coding MGP_CBAJ_T0062436.1 MGP_CBAJ_G0027364.1 mouse_genomes_project 3 111818315 111860611 + MGP_CBAJ_P0062436 Csde1 protein_coding protein_coding MGP_CBAJ_T0062437.1 MGP_CBAJ_G0027364.1 mouse_genomes_project 3 111828552 111845602 + Csde1 protein_coding retained_intron MGP_CBAJ_T0062438.1 MGP_CBAJ_G0027364.1 mouse_genomes_project 3 111828645 111830449 + Csde1 protein_coding retained_intron MGP_CBAJ_T0062439.1 MGP_CBAJ_G0027364.1 mouse_genomes_project 3 111829715 111846730 + Csde1 protein_coding processed_transcript MGP_CBAJ_T0062440.1 MGP_CBAJ_G0027364.1 mouse_genomes_project 3 111842584 111847489 + Csde1 protein_coding processed_transcript MGP_CBAJ_T0062441.1 MGP_CBAJ_G0027364.1 mouse_genomes_project 3 111842843 111846909 + Csde1 protein_coding retained_intron MGP_CBAJ_T0062442.1 MGP_CBAJ_G0027364.1 mouse_genomes_project 3 111842872 111849609 + MGP_CBAJ_P0062442 Csde1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062443.1 MGP_CBAJ_G0027364.1 mouse_genomes_project 3 111846037 111860593 + MGP_CBAJ_P0062443 Csde1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062444.1 MGP_CBAJ_G0027364.1 mouse_genomes_project 3 111846386 111847091 + Csde1 protein_coding retained_intron MGP_CBAJ_T0062445.1 MGP_CBAJ_G0027364.1 mouse_genomes_project 3 111852806 111853878 + Csde1 protein_coding retained_intron MGP_CBAJ_T0062446.1 MGP_CBAJ_G0027364.1 mouse_genomes_project 3 111858859 111859938 + Csde1 protein_coding retained_intron MGP_CBAJ_T0062727.1 MGP_CBAJ_G0027432.1 mouse_genomes_project 3 117162150 117181608 - MGP_CBAJ_P0062727 Csf1 protein_coding protein_coding MGP_CBAJ_T0062728.1 MGP_CBAJ_G0027432.1 mouse_genomes_project 3 117162150 117181375 - MGP_CBAJ_P0062728 Csf1 protein_coding protein_coding MGP_CBAJ_T0062729.1 MGP_CBAJ_G0027432.1 mouse_genomes_project 3 117164116 117172082 - MGP_CBAJ_P0062729 Csf1 protein_coding protein_coding MGP_CBAJ_T0062730.1 MGP_CBAJ_G0027432.1 mouse_genomes_project 3 117166697 117181381 - MGP_CBAJ_P0062730 Csf1 protein_coding protein_coding MGP_CBAJ_T0062731.1 MGP_CBAJ_G0027432.1 mouse_genomes_project 3 117168835 117181381 - Csf1 protein_coding retained_intron MGP_CBAJ_T0062732.1 MGP_CBAJ_G0027432.1 mouse_genomes_project 3 117169644 117171844 - MGP_CBAJ_P0062732 Csf1 protein_coding protein_coding MGP_CBAJ_T0062733.1 MGP_CBAJ_G0027432.1 mouse_genomes_project 3 117171482 117181360 - MGP_CBAJ_P0062733 Csf1 protein_coding protein_coding MGP_CBAJ_T0010423.1 MGP_CBAJ_G0008561.1 mouse_genomes_project 3 133722230 133722287 - Mir7657 miRNA miRNA MGP_CBAJ_T0098203.1 MGP_CBAJ_G0036476.1 mouse_genomes_project 3 95345393 95345520 + Gm25820 scaRNA scaRNA MGP_CBAJ_T0010404.1 MGP_CBAJ_G0008542.1 mouse_genomes_project 3 96970145 96970225 + Mir190b miRNA miRNA MGP_CBAJ_T0007569.1 MGP_CBAJ_G0006185.1 mouse_genomes_project 3 126931258 126935671 + Gm26530 lincRNA lincRNA MGP_CBAJ_T0059814.1 MGP_CBAJ_G0026794.1 mouse_genomes_project 3 19074479 19138129 - MGP_CBAJ_P0059814 Agtr1b protein_coding protein_coding MGP_CBAJ_T0059815.1 MGP_CBAJ_G0026794.1 mouse_genomes_project 3 19074903 19138076 - MGP_CBAJ_P0059815 Agtr1b protein_coding protein_coding MGP_CBAJ_T0007403.1 MGP_CBAJ_G0006060.1 mouse_genomes_project 3 35908437 35968143 - Gm6639 lincRNA lincRNA MGP_CBAJ_T0013861.1 MGP_CBAJ_G0011973.1 mouse_genomes_project 3 56432795 56435636 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001116.1 MGP_CBAJ_G0001045.1 mouse_genomes_project 3 38143743 38145817 - TEC TEC MGP_CBAJ_T0001164.1 MGP_CBAJ_G0001091.1 mouse_genomes_project 3 54150458 54152675 - TEC TEC MGP_CBAJ_T0098496.1 MGP_CBAJ_G0036752.1 mouse_genomes_project 3 99336669 99387322 - 4930511M18Rik sense_overlapping sense_overlapping MGP_CBAJ_T0060253.1 MGP_CBAJ_G0026873.1 mouse_genomes_project 3 41543269 41587173 - MGP_CBAJ_P0060253 Mfsd8 protein_coding protein_coding MGP_CBAJ_T0060254.1 MGP_CBAJ_G0026873.1 mouse_genomes_project 3 41543280 41567471 - MGP_CBAJ_P0060254 Mfsd8 protein_coding unknown_likely_coding MGP_CBAJ_T0060255.1 MGP_CBAJ_G0026873.1 mouse_genomes_project 3 41544674 41587090 - MGP_CBAJ_P0060255 Mfsd8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060256.1 MGP_CBAJ_G0026873.1 mouse_genomes_project 3 41552097 41586982 - MGP_CBAJ_P0060256 Mfsd8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060257.1 MGP_CBAJ_G0026873.1 mouse_genomes_project 3 41552605 41556120 - Mfsd8 protein_coding retained_intron MGP_CBAJ_T0060258.1 MGP_CBAJ_G0026873.1 mouse_genomes_project 3 41557167 41586822 - MGP_CBAJ_P0060258 Mfsd8 protein_coding protein_coding MGP_CBAJ_T0060259.1 MGP_CBAJ_G0026873.1 mouse_genomes_project 3 41578113 41587174 - Mfsd8 protein_coding retained_intron MGP_CBAJ_T0060260.1 MGP_CBAJ_G0026873.1 mouse_genomes_project 3 41580183 41587104 - MGP_CBAJ_P0060260 Mfsd8 protein_coding protein_coding MGP_CBAJ_T0100457.1 MGP_CBAJ_G0038712.1 mouse_genomes_project 3 82285797 82285874 - Gm23644 snoRNA snoRNA MGP_CBAJ_T0007552.1 MGP_CBAJ_G0006172.1 mouse_genomes_project 3 114944068 114945905 + Gm5547 lincRNA lincRNA MGP_CBAJ_T0007553.1 MGP_CBAJ_G0006172.1 mouse_genomes_project 3 114944095 114945898 + Gm5547 lincRNA lincRNA MGP_CBAJ_T0007554.1 MGP_CBAJ_G0006172.1 mouse_genomes_project 3 114945157 114945906 + Gm5547 lincRNA lincRNA MGP_CBAJ_T0001261.1 MGP_CBAJ_G0001188.1 mouse_genomes_project 3 131990441 131991138 - TEC TEC MGP_CBAJ_T0098374.1 MGP_CBAJ_G0036640.1 mouse_genomes_project 3 114913384 114915073 - Gm43331 sense_intronic sense_intronic MGP_CBAJ_T0062345.1 MGP_CBAJ_G0027343.1 mouse_genomes_project 3 108900385 108937941 - Fam46c protein_coding processed_transcript MGP_CBAJ_T0062346.1 MGP_CBAJ_G0027343.1 mouse_genomes_project 3 108900388 108937937 - Fam46c protein_coding processed_transcript MGP_CBAJ_T0062347.1 MGP_CBAJ_G0027343.1 mouse_genomes_project 3 108916791 108938067 - MGP_CBAJ_P0062347 Fam46c protein_coding protein_coding MGP_CBAJ_T0001112.1 MGP_CBAJ_G0001041.1 mouse_genomes_project 3 36954176 36957286 - TEC TEC MGP_CBAJ_T0007494.1 MGP_CBAJ_G0006129.1 mouse_genomes_project 3 89445992 89464778 - 1700028M03Rik lincRNA lincRNA MGP_CBAJ_T0007377.1 MGP_CBAJ_G0006036.1 mouse_genomes_project 3 19280871 19283978 - Gm31466 lincRNA lincRNA MGP_CBAJ_T0004312.1 MGP_CBAJ_G0003760.1 mouse_genomes_project 3 158396615 158399437 + antisense antisense MGP_CBAJ_T0007475.1 MGP_CBAJ_G0006114.1 mouse_genomes_project 3 80581346 80589478 - Platr10 lincRNA lincRNA MGP_CBAJ_T0007476.1 MGP_CBAJ_G0006114.1 mouse_genomes_project 3 80581740 80582555 - Platr10 lincRNA lincRNA MGP_CBAJ_T0063041.1 MGP_CBAJ_G0027500.1 mouse_genomes_project 3 128423744 128523466 - MGP_CBAJ_P0063041 Snx7 protein_coding protein_coding MGP_CBAJ_T0063042.1 MGP_CBAJ_G0027500.1 mouse_genomes_project 3 128424049 128494230 - MGP_CBAJ_P0063042 Snx7 protein_coding protein_coding MGP_CBAJ_T0063043.1 MGP_CBAJ_G0027500.1 mouse_genomes_project 3 128424175 128523382 - MGP_CBAJ_P0063043 Snx7 protein_coding protein_coding MGP_CBAJ_T0063044.1 MGP_CBAJ_G0027500.1 mouse_genomes_project 3 128470520 128474713 - Snx7 protein_coding retained_intron MGP_CBAJ_T0007517.1 MGP_CBAJ_G0006140.1 mouse_genomes_project 3 99329463 99331744 + Gm43736 lincRNA lincRNA MGP_CBAJ_T0007622.1 MGP_CBAJ_G0006228.1 mouse_genomes_project 3 150768800 150769244 - Gm43689 lincRNA lincRNA MGP_CBAJ_T0007583.1 MGP_CBAJ_G0006194.1 mouse_genomes_project 3 132751311 132752129 - Gm43607 lincRNA lincRNA MGP_CBAJ_T0062155.1 MGP_CBAJ_G0027287.1 mouse_genomes_project 3 104220524 104225301 + MGP_CBAJ_P0062155 Sf3b4 protein_coding protein_coding MGP_CBAJ_T0062156.1 MGP_CBAJ_G0027287.1 mouse_genomes_project 3 104220737 104221537 + Sf3b4 protein_coding retained_intron MGP_CBAJ_T0059891.1 MGP_CBAJ_G0026807.1 mouse_genomes_project 3 28222257 28263998 + MGP_CBAJ_P0059891 Slc2a2 protein_coding protein_coding MGP_CBAJ_T0059892.1 MGP_CBAJ_G0026807.1 mouse_genomes_project 3 28222371 28260104 + MGP_CBAJ_P0059892 Slc2a2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059893.1 MGP_CBAJ_G0026807.1 mouse_genomes_project 3 28249730 28260953 + Slc2a2 protein_coding retained_intron MGP_CBAJ_T0001323.1 MGP_CBAJ_G0001249.1 mouse_genomes_project 3 148233017 148236914 - TEC TEC MGP_CBAJ_T0061182.1 MGP_CBAJ_G0027076.1 mouse_genomes_project 3 94766834 94778670 - MGP_CBAJ_P0061182 Rhbg protein_coding protein_coding MGP_CBAJ_T0007392.1 MGP_CBAJ_G0006050.1 mouse_genomes_project 3 34111461 34113658 - Gm43077 lincRNA lincRNA MGP_CBAJ_T0013722.1 MGP_CBAJ_G0011834.1 mouse_genomes_project 3 6267184 6267517 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062946.1 MGP_CBAJ_G0027480.1 mouse_genomes_project 3 126258478 126291632 + MGP_CBAJ_P0062946 Dph5 protein_coding protein_coding MGP_CBAJ_T0062947.1 MGP_CBAJ_G0027480.1 mouse_genomes_project 3 126258493 126259120 + MGP_CBAJ_P0062947 Dph5 protein_coding protein_coding MGP_CBAJ_T0062948.1 MGP_CBAJ_G0027480.1 mouse_genomes_project 3 126258787 126272168 + MGP_CBAJ_P0062948 Dph5 protein_coding protein_coding MGP_CBAJ_T0062949.1 MGP_CBAJ_G0027480.1 mouse_genomes_project 3 126258805 126296846 + MGP_CBAJ_P0062949 Dph5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062950.1 MGP_CBAJ_G0027480.1 mouse_genomes_project 3 126258813 126273534 + MGP_CBAJ_P0062950 Dph5 protein_coding protein_coding MGP_CBAJ_T0062951.1 MGP_CBAJ_G0027480.1 mouse_genomes_project 3 126258823 126291811 + MGP_CBAJ_P0062951 Dph5 protein_coding protein_coding MGP_CBAJ_T0062952.1 MGP_CBAJ_G0027480.1 mouse_genomes_project 3 126258834 126262915 + Dph5 protein_coding retained_intron MGP_CBAJ_T0062953.1 MGP_CBAJ_G0027480.1 mouse_genomes_project 3 126258835 126263630 + Dph5 protein_coding retained_intron MGP_CBAJ_T0004180.1 MGP_CBAJ_G0003675.1 mouse_genomes_project 3 84606531 84648074 + 4921511C10Rik antisense antisense MGP_CBAJ_T0007422.1 MGP_CBAJ_G0006075.1 mouse_genomes_project 3 42067647 42072174 - Gm16508 lincRNA lincRNA MGP_CBAJ_T0063116.1 MGP_CBAJ_G0027512.1 mouse_genomes_project 3 133156832 133317912 + MGP_CBAJ_P0063116 Abca4 protein_coding protein_coding MGP_CBAJ_T0063117.1 MGP_CBAJ_G0027512.1 mouse_genomes_project 3 133158893 133217560 + Abca4 protein_coding processed_transcript MGP_CBAJ_T0063118.1 MGP_CBAJ_G0027512.1 mouse_genomes_project 3 133188583 133205384 + Abca4 protein_coding processed_transcript MGP_CBAJ_T0063119.1 MGP_CBAJ_G0027512.1 mouse_genomes_project 3 133245336 133256045 + Abca4 protein_coding retained_intron MGP_CBAJ_T0063120.1 MGP_CBAJ_G0027512.1 mouse_genomes_project 3 133247050 133253855 + Abca4 protein_coding retained_intron MGP_CBAJ_T0063121.1 MGP_CBAJ_G0027512.1 mouse_genomes_project 3 133259389 133317914 + MGP_CBAJ_P0063121 Abca4 protein_coding protein_coding MGP_CBAJ_T0063122.1 MGP_CBAJ_G0027512.1 mouse_genomes_project 3 133294504 133300291 + Abca4 protein_coding retained_intron MGP_CBAJ_T0063123.1 MGP_CBAJ_G0027512.1 mouse_genomes_project 3 133299789 133308181 + Abca4 protein_coding retained_intron MGP_CBAJ_T0063124.1 MGP_CBAJ_G0027512.1 mouse_genomes_project 3 133307820 133308848 + Abca4 protein_coding processed_transcript MGP_CBAJ_T0063125.1 MGP_CBAJ_G0027512.1 mouse_genomes_project 3 133310865 133317976 + Abca4 protein_coding retained_intron MGP_CBAJ_T0007456.1 MGP_CBAJ_G0006098.1 mouse_genomes_project 3 61000049 61050269 + 4921539H07Rik lincRNA lincRNA MGP_CBAJ_T0007458.1 MGP_CBAJ_G0006098.1 mouse_genomes_project 3 61049127 61052812 + 4921539H07Rik lincRNA lincRNA MGP_CBAJ_T0014041.1 MGP_CBAJ_G0012153.1 mouse_genomes_project 3 113642450 113642793 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061697.1 MGP_CBAJ_G0027159.1 mouse_genomes_project 3 97458581 97468501 + MGP_CBAJ_P0061697 S100a13 protein_coding protein_coding MGP_CBAJ_T0100491.1 MGP_CBAJ_G0038746.1 mouse_genomes_project 3 140383167 140383276 + Gm22293 snoRNA snoRNA MGP_CBAJ_T0014026.1 MGP_CBAJ_G0012138.1 mouse_genomes_project 3 109836647 109837207 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0060681.1 MGP_CBAJ_G0026960.1 mouse_genomes_project 3 67629841 67655271 - MGP_CBAJ_P0060681 protein_coding protein_coding MGP_CBAJ_T0060959.1 MGP_CBAJ_G0027026.1 mouse_genomes_project 3 88903530 88924157 + MGP_CBAJ_P0060959 Plrg1 protein_coding protein_coding MGP_CBAJ_T0060960.1 MGP_CBAJ_G0027026.1 mouse_genomes_project 3 88903540 88924091 + MGP_CBAJ_P0060960 Plrg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060961.1 MGP_CBAJ_G0027026.1 mouse_genomes_project 3 88903563 88923974 + MGP_CBAJ_P0060961 Plrg1 protein_coding protein_coding MGP_CBAJ_T0060962.1 MGP_CBAJ_G0027026.1 mouse_genomes_project 3 88918292 88919314 + Plrg1 protein_coding retained_intron MGP_CBAJ_T0060963.1 MGP_CBAJ_G0027026.1 mouse_genomes_project 3 88919221 88920411 + Plrg1 protein_coding retained_intron MGP_CBAJ_T0061220.1 MGP_CBAJ_G0027083.1 mouse_genomes_project 3 94900362 94903357 + MGP_CBAJ_P0061220 Paqr6 protein_coding unknown_likely_coding MGP_CBAJ_T0061221.1 MGP_CBAJ_G0027083.1 mouse_genomes_project 3 94900416 94903069 + Paqr6 protein_coding processed_transcript MGP_CBAJ_T0061222.1 MGP_CBAJ_G0027083.1 mouse_genomes_project 3 94900418 94901628 + Paqr6 protein_coding retained_intron MGP_CBAJ_T0007619.1 MGP_CBAJ_G0006225.1 mouse_genomes_project 3 150090055 150103234 + Gm567 lincRNA lincRNA MGP_CBAJ_T0061805.1 MGP_CBAJ_G0027228.1 mouse_genomes_project 3 102017338 102019467 + MGP_CBAJ_P0061805 C2cd4d protein_coding protein_coding MGP_CBAJ_T0061806.1 MGP_CBAJ_G0027228.1 mouse_genomes_project 3 102017403 102018065 + C2cd4d protein_coding retained_intron MGP_CBAJ_T0061756.1 MGP_CBAJ_G0027193.1 mouse_genomes_project 3 99922427 99925202 - MGP_CBAJ_P0061756 2210017I01Rik protein_coding protein_coding MGP_CBAJ_T0013935.1 MGP_CBAJ_G0012047.1 mouse_genomes_project 3 79649554 79650179 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063607.1 MGP_CBAJ_G0027603.1 mouse_genomes_project 3 151094652 151110298 + MGP_CBAJ_P0063607 Adh7 protein_coding protein_coding MGP_CBAJ_T0063608.1 MGP_CBAJ_G0027603.1 mouse_genomes_project 3 151098356 151099973 + Adh7 protein_coding retained_intron MGP_CBAJ_T0063609.1 MGP_CBAJ_G0027603.1 mouse_genomes_project 3 151104934 151108325 + Adh7 protein_coding processed_transcript MGP_CBAJ_T0010434.1 MGP_CBAJ_G0008572.1 mouse_genomes_project 3 150613003 150613084 - Mir6380 miRNA miRNA MGP_CBAJ_T0007610.1 MGP_CBAJ_G0006217.1 mouse_genomes_project 3 146193912 146198071 - lincRNA lincRNA MGP_CBAJ_T0011422.1 MGP_CBAJ_G0009560.1 mouse_genomes_project 3 132330027 132330295 + Gm26027 misc_RNA misc_RNA MGP_CBAJ_T0059905.1 MGP_CBAJ_G0026811.1 mouse_genomes_project 3 28680447 28753531 + MGP_CBAJ_P0059905 Egfem1 protein_coding protein_coding MGP_CBAJ_T0059906.1 MGP_CBAJ_G0026811.1 mouse_genomes_project 3 28680724 29231600 + MGP_CBAJ_P0059906 Egfem1 protein_coding protein_coding MGP_CBAJ_T0059907.1 MGP_CBAJ_G0026811.1 mouse_genomes_project 3 28680987 29330435 + Egfem1 protein_coding retained_intron MGP_CBAJ_T0059908.1 MGP_CBAJ_G0026811.1 mouse_genomes_project 3 28681143 29357426 + MGP_CBAJ_P0059908 Egfem1 protein_coding protein_coding MGP_CBAJ_T0059909.1 MGP_CBAJ_G0026811.1 mouse_genomes_project 3 28681181 29356727 + MGP_CBAJ_P0059909 Egfem1 protein_coding protein_coding MGP_CBAJ_T0059910.1 MGP_CBAJ_G0026811.1 mouse_genomes_project 3 29117918 29304546 + Egfem1 protein_coding processed_transcript MGP_CBAJ_T0059911.1 MGP_CBAJ_G0026811.1 mouse_genomes_project 3 29168285 29329542 + MGP_CBAJ_P0059911 Egfem1 protein_coding protein_coding MGP_CBAJ_T0007473.1 MGP_CBAJ_G0006112.1 mouse_genomes_project 3 77979227 78131245 - lincRNA lincRNA MGP_CBAJ_T0013949.1 MGP_CBAJ_G0012061.1 mouse_genomes_project 3 84231959 84237877 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004159.1 MGP_CBAJ_G0003659.1 mouse_genomes_project 3 55325355 55328526 - Gm42901 antisense antisense MGP_CBAJ_T0060860.1 MGP_CBAJ_G0027002.1 mouse_genomes_project 3 84429946 84529949 - MGP_CBAJ_P0060860 Rapgef2 protein_coding protein_coding MGP_CBAJ_T0060861.1 MGP_CBAJ_G0027002.1 mouse_genomes_project 3 84429958 84530849 - MGP_CBAJ_P0060861 Rapgef2 protein_coding protein_coding MGP_CBAJ_T0060862.1 MGP_CBAJ_G0027002.1 mouse_genomes_project 3 84429961 84687062 - MGP_CBAJ_P0060862 Rapgef2 protein_coding protein_coding MGP_CBAJ_T0060863.1 MGP_CBAJ_G0027002.1 mouse_genomes_project 3 84489644 84565080 - Rapgef2 protein_coding retained_intron MGP_CBAJ_T0060864.1 MGP_CBAJ_G0027002.1 mouse_genomes_project 3 84492734 84565182 - Rapgef2 protein_coding processed_transcript MGP_CBAJ_T0060865.1 MGP_CBAJ_G0027002.1 mouse_genomes_project 3 84560255 84575068 - Rapgef2 protein_coding retained_intron MGP_CBAJ_T0061737.1 MGP_CBAJ_G0027176.1 mouse_genomes_project 3 99361675 99363389 - MGP_CBAJ_P0061737 Prr9 protein_coding protein_coding MGP_CBAJ_T0001231.1 MGP_CBAJ_G0001158.1 mouse_genomes_project 3 104575702 104578567 - TEC TEC MGP_CBAJ_T0013854.1 MGP_CBAJ_G0011966.1 mouse_genomes_project 3 53688283 53688596 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060389.1 MGP_CBAJ_G0026893.1 mouse_genomes_project 3 53812208 53944097 - MGP_CBAJ_P0060389 Maml3 protein_coding protein_coding MGP_CBAJ_T0060390.1 MGP_CBAJ_G0026893.1 mouse_genomes_project 3 53812208 54281174 - MGP_CBAJ_P0060390 Maml3 protein_coding protein_coding MGP_CBAJ_T0060391.1 MGP_CBAJ_G0026893.1 mouse_genomes_project 3 53941939 53944135 - Maml3 protein_coding retained_intron MGP_CBAJ_T0100464.1 MGP_CBAJ_G0038719.1 mouse_genomes_project 3 92512952 92513083 - Gm26343 snoRNA snoRNA MGP_CBAJ_T0014171.1 MGP_CBAJ_G0012283.1 mouse_genomes_project 3 158577616 158578253 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0060564.1 MGP_CBAJ_G0026929.1 mouse_genomes_project 3 61508394 61528312 + MGP_CBAJ_P0060564 Selt protein_coding protein_coding MGP_CBAJ_T0060565.1 MGP_CBAJ_G0026929.1 mouse_genomes_project 3 61508419 61528302 + MGP_CBAJ_P0060565 Selt protein_coding unknown_likely_coding MGP_CBAJ_T0060566.1 MGP_CBAJ_G0026929.1 mouse_genomes_project 3 61508456 61525072 + Selt protein_coding retained_intron MGP_CBAJ_T0098350.1 MGP_CBAJ_G0036616.1 mouse_genomes_project 3 112795987 112798078 + Gm43065 sense_intronic sense_intronic MGP_CBAJ_T0007617.1 MGP_CBAJ_G0006223.1 mouse_genomes_project 3 149715669 149718988 - Gm43357 lincRNA lincRNA MGP_CBAJ_T0099230.1 MGP_CBAJ_G0037485.1 mouse_genomes_project 3 166662445 166662507 - Gm25056 snRNA snRNA MGP_CBAJ_T0007411.1 MGP_CBAJ_G0006067.1 mouse_genomes_project 3 38443057 38540665 + lincRNA lincRNA MGP_CBAJ_T0001283.1 MGP_CBAJ_G0001210.1 mouse_genomes_project 3 138229795 138231433 + TEC TEC MGP_CBAJ_T0060152.1 MGP_CBAJ_G0026855.1 mouse_genomes_project 3 37057281 37126700 - MGP_CBAJ_P0060152 Trpc3 protein_coding protein_coding MGP_CBAJ_T0060153.1 MGP_CBAJ_G0026855.1 mouse_genomes_project 3 37057362 37058164 - Trpc3 protein_coding processed_transcript MGP_CBAJ_T0060154.1 MGP_CBAJ_G0026855.1 mouse_genomes_project 3 37057362 37058142 - Trpc3 protein_coding processed_transcript MGP_CBAJ_T0060155.1 MGP_CBAJ_G0026855.1 mouse_genomes_project 3 37074998 37077246 - Trpc3 protein_coding retained_intron MGP_CBAJ_T0060156.1 MGP_CBAJ_G0026855.1 mouse_genomes_project 3 37105686 37126700 - Trpc3 protein_coding retained_intron MGP_CBAJ_T0063344.1 MGP_CBAJ_G0027550.1 mouse_genomes_project 3 141855042 141861521 - MGP_CBAJ_P0063344 Gar1 protein_coding protein_coding MGP_CBAJ_T0063345.1 MGP_CBAJ_G0027550.1 mouse_genomes_project 3 141855046 141859497 - MGP_CBAJ_P0063345 Gar1 protein_coding protein_coding MGP_CBAJ_T0063346.1 MGP_CBAJ_G0027550.1 mouse_genomes_project 3 141855049 141855805 - Gar1 protein_coding retained_intron MGP_CBAJ_T0063347.1 MGP_CBAJ_G0027550.1 mouse_genomes_project 3 141855682 141857411 - Gar1 protein_coding retained_intron MGP_CBAJ_T0063348.1 MGP_CBAJ_G0027550.1 mouse_genomes_project 3 141855701 141861485 - Gar1 protein_coding processed_transcript MGP_CBAJ_T0063349.1 MGP_CBAJ_G0027550.1 mouse_genomes_project 3 141856973 141861057 - MGP_CBAJ_P0063349 Gar1 protein_coding protein_coding MGP_CBAJ_T0014051.1 MGP_CBAJ_G0012163.1 mouse_genomes_project 3 117456821 117457058 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007393.1 MGP_CBAJ_G0006051.1 mouse_genomes_project 3 34424117 34479794 - Gm38505 lincRNA lincRNA MGP_CBAJ_T0004153.1 MGP_CBAJ_G0003653.1 mouse_genomes_project 3 39649254 39650334 - Gm43539 antisense antisense MGP_CBAJ_T0014089.1 MGP_CBAJ_G0012201.1 mouse_genomes_project 3 132142453 132143448 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101878.1 MGP_CBAJ_G0039909.1 mouse_genomes_project 3 156210479 156223930 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099232.1 MGP_CBAJ_G0037487.1 mouse_genomes_project 3 172573414 172573521 - Gm23725 snRNA snRNA MGP_CBAJ_T0100467.1 MGP_CBAJ_G0038722.1 mouse_genomes_project 3 95358640 95358775 + Gm25945 snoRNA snoRNA MGP_CBAJ_T0061305.1 MGP_CBAJ_G0027094.1 mouse_genomes_project 3 95299377 95300622 - MGP_CBAJ_P0061305 Rxfp4 protein_coding protein_coding MGP_CBAJ_T0059633.1 MGP_CBAJ_G0026742.1 mouse_genomes_project 3 4758411 4805916 - MGP_CBAJ_P0059633 Il7 protein_coding protein_coding MGP_CBAJ_T0059634.1 MGP_CBAJ_G0026742.1 mouse_genomes_project 3 4758505 4806477 - Il7 protein_coding processed_transcript MGP_CBAJ_T0062180.1 MGP_CBAJ_G0027300.1 mouse_genomes_project 3 104706597 104710948 - MGP_CBAJ_P0062180 Polr3gl protein_coding protein_coding MGP_CBAJ_T0062181.1 MGP_CBAJ_G0027300.1 mouse_genomes_project 3 104707130 104710412 - Polr3gl protein_coding retained_intron MGP_CBAJ_T0062182.1 MGP_CBAJ_G0027300.1 mouse_genomes_project 3 104707138 104708893 - Polr3gl protein_coding retained_intron MGP_CBAJ_T0061826.1 MGP_CBAJ_G0027233.1 mouse_genomes_project 3 102100066 102103586 + Mrpl9 protein_coding retained_intron MGP_CBAJ_T0061827.1 MGP_CBAJ_G0027233.1 mouse_genomes_project 3 102100073 102105491 + MGP_CBAJ_P0061827 Mrpl9 protein_coding protein_coding MGP_CBAJ_T0061828.1 MGP_CBAJ_G0027233.1 mouse_genomes_project 3 102100085 102107871 + MGP_CBAJ_P0061828 Mrpl9 protein_coding protein_coding MGP_CBAJ_T0062872.1 MGP_CBAJ_G0027464.1 mouse_genomes_project 3 118452079 118494567 - MGP_CBAJ_P0062872 Fndc7 protein_coding protein_coding MGP_CBAJ_T0062873.1 MGP_CBAJ_G0027464.1 mouse_genomes_project 3 118452084 118457004 - Fndc7 protein_coding processed_transcript MGP_CBAJ_T0062874.1 MGP_CBAJ_G0027464.1 mouse_genomes_project 3 118453724 118494869 - MGP_CBAJ_P0062874 Fndc7 protein_coding protein_coding MGP_CBAJ_T0062875.1 MGP_CBAJ_G0027464.1 mouse_genomes_project 3 118453741 118494676 - MGP_CBAJ_P0062875 Fndc7 protein_coding protein_coding MGP_CBAJ_T0062876.1 MGP_CBAJ_G0027464.1 mouse_genomes_project 3 118454489 118457000 - Fndc7 protein_coding processed_transcript MGP_CBAJ_T0062877.1 MGP_CBAJ_G0027464.1 mouse_genomes_project 3 118463459 118472890 - Fndc7 protein_coding processed_transcript MGP_CBAJ_T0062878.1 MGP_CBAJ_G0027464.1 mouse_genomes_project 3 118471631 118484047 - Fndc7 protein_coding retained_intron MGP_CBAJ_T0014049.1 MGP_CBAJ_G0012161.1 mouse_genomes_project 3 117318817 117321090 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100488.1 MGP_CBAJ_G0038743.1 mouse_genomes_project 3 134774687 134774817 - Snora24 snoRNA snoRNA MGP_CBAJ_T0001119.1 MGP_CBAJ_G0001048.1 mouse_genomes_project 3 38366690 38367822 + TEC TEC MGP_CBAJ_T0001174.1 MGP_CBAJ_G0001101.1 mouse_genomes_project 3 55404263 55405087 + TEC TEC MGP_CBAJ_T0014154.1 MGP_CBAJ_G0012266.1 mouse_genomes_project 3 152450650 152451092 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061719.1 MGP_CBAJ_G0027166.1 mouse_genomes_project 3 97551436 97554692 + MGP_CBAJ_P0061719 S100a5 protein_coding protein_coding MGP_CBAJ_T0061720.1 MGP_CBAJ_G0027166.1 mouse_genomes_project 3 97552721 97554692 + MGP_CBAJ_P0061720 S100a5 protein_coding protein_coding MGP_CBAJ_T0007355.1 MGP_CBAJ_G0006024.1 mouse_genomes_project 3 9642935 9666283 - Gm10745 lincRNA lincRNA MGP_CBAJ_T0099196.1 MGP_CBAJ_G0037451.1 mouse_genomes_project 3 102713181 102713283 - Gm26279 snRNA snRNA MGP_CBAJ_T0099224.1 MGP_CBAJ_G0037479.1 mouse_genomes_project 3 150764225 150764324 - Gm25920 snRNA snRNA MGP_CBAJ_T0013965.1 MGP_CBAJ_G0012077.1 mouse_genomes_project 3 93259084 93259380 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013912.1 MGP_CBAJ_G0012024.1 mouse_genomes_project 3 72791664 72792826 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061790.1 MGP_CBAJ_G0027220.1 mouse_genomes_project 3 100712887 100719494 + Flg protein_coding TEC MGP_CBAJ_T0061791.1 MGP_CBAJ_G0027220.1 mouse_genomes_project 3 100712905 100721759 + MGP_CBAJ_P0061791 Flg protein_coding protein_coding MGP_CBAJ_T0061792.1 MGP_CBAJ_G0027220.1 mouse_genomes_project 3 100719016 100721759 + MGP_CBAJ_P0061792 Flg protein_coding protein_coding MGP_CBAJ_T0060392.1 MGP_CBAJ_G0026894.1 mouse_genomes_project 3 54458004 54548517 + MGP_CBAJ_P0060392 Foxo1 protein_coding protein_coding MGP_CBAJ_T0063626.1 MGP_CBAJ_G0027608.1 mouse_genomes_project 3 151373580 151407146 - MGP_CBAJ_P0063626 Metap1 protein_coding protein_coding MGP_CBAJ_T0063627.1 MGP_CBAJ_G0027608.1 mouse_genomes_project 3 151374305 151383545 - MGP_CBAJ_P0063627 Metap1 protein_coding protein_coding MGP_CBAJ_T0063628.1 MGP_CBAJ_G0027608.1 mouse_genomes_project 3 151380862 151389707 - Metap1 protein_coding retained_intron MGP_CBAJ_T0063629.1 MGP_CBAJ_G0027608.1 mouse_genomes_project 3 151380923 151389796 - Metap1 protein_coding retained_intron MGP_CBAJ_T0063630.1 MGP_CBAJ_G0027608.1 mouse_genomes_project 3 151383543 151396189 - Metap1 protein_coding processed_transcript MGP_CBAJ_T0063631.1 MGP_CBAJ_G0027608.1 mouse_genomes_project 3 151390051 151407030 - MGP_CBAJ_P0063631 Metap1 protein_coding protein_coding MGP_CBAJ_T0063632.1 MGP_CBAJ_G0027608.1 mouse_genomes_project 3 151394661 151407000 - Metap1 protein_coding retained_intron MGP_CBAJ_T0098335.1 MGP_CBAJ_G0036601.1 mouse_genomes_project 3 109148984 109150788 - Gm43463 sense_intronic sense_intronic MGP_CBAJ_T0007479.1 MGP_CBAJ_G0006117.1 mouse_genomes_project 3 84687717 84688718 + 6430573P05Rik lincRNA lincRNA MGP_CBAJ_T0007480.1 MGP_CBAJ_G0006117.1 mouse_genomes_project 3 84687936 84690389 + 6430573P05Rik lincRNA lincRNA MGP_CBAJ_T0007481.1 MGP_CBAJ_G0006117.1 mouse_genomes_project 3 84688272 84689349 + 6430573P05Rik lincRNA lincRNA MGP_CBAJ_T0007398.1 MGP_CBAJ_G0006056.1 mouse_genomes_project 3 34752829 34756549 - Gm43207 lincRNA lincRNA MGP_CBAJ_T0063867.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163074694 163087664 - MGP_CBAJ_P0063867 Adgrl2 protein_coding protein_coding MGP_CBAJ_T0063868.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163074697 163232742 - MGP_CBAJ_P0063868 Adgrl2 protein_coding protein_coding MGP_CBAJ_T0063869.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163074962 163119566 - MGP_CBAJ_P0063869 Adgrl2 protein_coding protein_coding MGP_CBAJ_T0063870.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163074966 163082887 - MGP_CBAJ_P0063870 Adgrl2 protein_coding protein_coding MGP_CBAJ_T0063871.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163074967 163082095 - MGP_CBAJ_P0063871 Adgrl2 protein_coding protein_coding MGP_CBAJ_T0063872.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163075187 163232707 - MGP_CBAJ_P0063872 Adgrl2 protein_coding protein_coding MGP_CBAJ_T0063873.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163075204 163272059 - MGP_CBAJ_P0063873 Adgrl2 protein_coding protein_coding MGP_CBAJ_T0063874.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163075204 163272059 - MGP_CBAJ_P0063874 Adgrl2 protein_coding protein_coding MGP_CBAJ_T0063875.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163076051 163232823 - MGP_CBAJ_P0063875 Adgrl2 protein_coding protein_coding MGP_CBAJ_T0063876.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163076204 163232836 - MGP_CBAJ_P0063876 Adgrl2 protein_coding protein_coding MGP_CBAJ_T0063877.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163076204 163232836 - MGP_CBAJ_P0063877 Adgrl2 protein_coding protein_coding MGP_CBAJ_T0063878.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163076204 163232836 - MGP_CBAJ_P0063878 Adgrl2 protein_coding protein_coding MGP_CBAJ_T0063879.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163076204 163232836 - MGP_CBAJ_P0063879 Adgrl2 protein_coding protein_coding MGP_CBAJ_T0063880.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163076833 163093042 - MGP_CBAJ_P0063880 Adgrl2 protein_coding protein_coding MGP_CBAJ_T0063881.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163076856 163094505 - MGP_CBAJ_P0063881 Adgrl2 protein_coding protein_coding MGP_CBAJ_T0063882.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163076875 163085512 - MGP_CBAJ_P0063882 Adgrl2 protein_coding protein_coding MGP_CBAJ_T0063883.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163079435 163084290 - Adgrl2 protein_coding retained_intron MGP_CBAJ_T0063884.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163086287 163094639 - Adgrl2 protein_coding retained_intron MGP_CBAJ_T0063885.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163120390 163232684 - MGP_CBAJ_P0063885 Adgrl2 protein_coding unknown_likely_coding MGP_CBAJ_T0063886.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163153695 163270820 - Adgrl2 protein_coding retained_intron MGP_CBAJ_T0063887.1 MGP_CBAJ_G0027657.1 mouse_genomes_project 3 163232008 163270986 - Adgrl2 protein_coding retained_intron MGP_CBAJ_T0004264.1 MGP_CBAJ_G0003724.1 mouse_genomes_project 3 117802948 117803890 - Gm12523 antisense antisense MGP_CBAJ_T0061463.1 MGP_CBAJ_G0027119.1 mouse_genomes_project 3 96089933 96099001 - MGP_CBAJ_P0061463 Efna3 protein_coding protein_coding MGP_CBAJ_T0061464.1 MGP_CBAJ_G0027119.1 mouse_genomes_project 3 96091398 96098923 - MGP_CBAJ_P0061464 Efna3 protein_coding protein_coding MGP_CBAJ_T0061465.1 MGP_CBAJ_G0027119.1 mouse_genomes_project 3 96091893 96097667 - Efna3 protein_coding processed_transcript MGP_CBAJ_T0062403.1 MGP_CBAJ_G0027358.1 mouse_genomes_project 3 111201207 111253798 + MGP_CBAJ_P0062403 Ngf protein_coding protein_coding MGP_CBAJ_T0062404.1 MGP_CBAJ_G0027358.1 mouse_genomes_project 3 111201216 111242791 + MGP_CBAJ_P0062404 Ngf protein_coding protein_coding MGP_CBAJ_T0062405.1 MGP_CBAJ_G0027358.1 mouse_genomes_project 3 111201216 111253963 + MGP_CBAJ_P0062405 Ngf protein_coding protein_coding MGP_CBAJ_T0062406.1 MGP_CBAJ_G0027358.1 mouse_genomes_project 3 111219930 111253945 + MGP_CBAJ_P0062406 Ngf protein_coding protein_coding MGP_CBAJ_T0007620.1 MGP_CBAJ_G0006226.1 mouse_genomes_project 3 150516451 150524617 + Gm42610 lincRNA lincRNA MGP_CBAJ_T0098362.1 MGP_CBAJ_G0036628.1 mouse_genomes_project 3 113463780 113469827 - Gm43696 sense_intronic sense_intronic MGP_CBAJ_T0007652.1 MGP_CBAJ_G0006253.1 mouse_genomes_project 3 157939130 157940665 + Gm43447 lincRNA lincRNA MGP_CBAJ_T0014011.1 MGP_CBAJ_G0012123.1 mouse_genomes_project 3 105325079 105325682 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061769.1 MGP_CBAJ_G0027205.1 mouse_genomes_project 3 100110530 100112202 - MGP_CBAJ_P0061769 Lce1i protein_coding protein_coding MGP_CBAJ_T0061716.1 MGP_CBAJ_G0027164.1 mouse_genomes_project 3 97544812 97548793 + MGP_CBAJ_P0061716 Gm42674 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061660.1 MGP_CBAJ_G0027152.1 mouse_genomes_project 3 97325681 97330347 - Slc27a3 protein_coding retained_intron MGP_CBAJ_T0061661.1 MGP_CBAJ_G0027152.1 mouse_genomes_project 3 97325681 97330336 - MGP_CBAJ_P0061661 Slc27a3 protein_coding protein_coding MGP_CBAJ_T0061662.1 MGP_CBAJ_G0027152.1 mouse_genomes_project 3 97325683 97330073 - MGP_CBAJ_P0061662 Slc27a3 protein_coding protein_coding MGP_CBAJ_T0061663.1 MGP_CBAJ_G0027152.1 mouse_genomes_project 3 97327843 97329390 - Slc27a3 protein_coding retained_intron MGP_CBAJ_T0061664.1 MGP_CBAJ_G0027152.1 mouse_genomes_project 3 97328771 97330039 - Slc27a3 protein_coding processed_transcript MGP_CBAJ_T0100465.1 MGP_CBAJ_G0038720.1 mouse_genomes_project 3 93412452 93412584 + Gm24472 snoRNA snoRNA MGP_CBAJ_T0014138.1 MGP_CBAJ_G0012250.1 mouse_genomes_project 3 148094684 148095199 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061739.1 MGP_CBAJ_G0027178.1 mouse_genomes_project 3 99585899 99587365 + MGP_CBAJ_P0061739 Sprr2b protein_coding protein_coding MGP_CBAJ_T0001244.1 MGP_CBAJ_G0001171.1 mouse_genomes_project 3 116017525 116023799 + TEC TEC MGP_CBAJ_T0059614.1 MGP_CBAJ_G0026736.1 mouse_genomes_project 3 1031105 1032202 + MGP_CBAJ_P0059614 protein_coding protein_coding MGP_CBAJ_T0099176.1 MGP_CBAJ_G0037431.1 mouse_genomes_project 3 70801425 70801529 + Gm22295 snRNA snRNA MGP_CBAJ_T0013747.1 MGP_CBAJ_G0011859.1 mouse_genomes_project 3 12764016 12764305 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001210.1 MGP_CBAJ_G0001137.1 mouse_genomes_project 3 82800413 82806800 - TEC TEC MGP_CBAJ_T0001237.1 MGP_CBAJ_G0001164.1 mouse_genomes_project 3 105868144 105872040 + TEC TEC MGP_CBAJ_T0101096.1 MGP_CBAJ_G0039303.1 mouse_genomes_project 3 58472822 58473786 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101097.1 MGP_CBAJ_G0039303.1 mouse_genomes_project 3 58472981 58474118 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0001079.1 MGP_CBAJ_G0001008.1 mouse_genomes_project 3 16825773 16830603 + TEC TEC MGP_CBAJ_T0007637.1 MGP_CBAJ_G0006240.1 mouse_genomes_project 3 156931277 156934654 + Gm43612 lincRNA lincRNA MGP_CBAJ_T0007522.1 MGP_CBAJ_G0006145.1 mouse_genomes_project 3 102373320 102374473 + lincRNA lincRNA MGP_CBAJ_T0060575.1 MGP_CBAJ_G0026933.1 mouse_genomes_project 3 61988296 62092805 + MGP_CBAJ_P0060575 Med12l protein_coding protein_coding MGP_CBAJ_T0060576.1 MGP_CBAJ_G0026933.1 mouse_genomes_project 3 61988958 62333804 + MGP_CBAJ_P0060576 Med12l protein_coding protein_coding MGP_CBAJ_T0060577.1 MGP_CBAJ_G0026933.1 mouse_genomes_project 3 61989449 62333532 + MGP_CBAJ_P0060577 Med12l protein_coding protein_coding MGP_CBAJ_T0060578.1 MGP_CBAJ_G0026933.1 mouse_genomes_project 3 61989449 62333532 + MGP_CBAJ_P0060578 Med12l protein_coding protein_coding MGP_CBAJ_T0060579.1 MGP_CBAJ_G0026933.1 mouse_genomes_project 3 61989449 62091705 + MGP_CBAJ_P0060579 Med12l protein_coding protein_coding MGP_CBAJ_T0060599.1 MGP_CBAJ_G0026933.1 mouse_genomes_project 3 62274486 62331023 + MGP_CBAJ_P0060599 Med12l protein_coding nonsense_mediated_decay MGP_CBAJ_T0010409.1 MGP_CBAJ_G0008547.1 mouse_genomes_project 3 102830857 102830929 + Mir7013 miRNA miRNA MGP_CBAJ_T0013891.1 MGP_CBAJ_G0012003.1 mouse_genomes_project 3 66284797 66288514 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001364.1 MGP_CBAJ_G0001290.1 mouse_genomes_project 3 173936440 173937465 + TEC TEC MGP_CBAJ_T0062173.1 MGP_CBAJ_G0027298.1 mouse_genomes_project 3 104683139 104687077 + MGP_CBAJ_P0062173 Txnip protein_coding protein_coding MGP_CBAJ_T0062174.1 MGP_CBAJ_G0027298.1 mouse_genomes_project 3 104683142 104687051 + MGP_CBAJ_P0062174 Txnip protein_coding protein_coding MGP_CBAJ_T0062175.1 MGP_CBAJ_G0027298.1 mouse_genomes_project 3 104684680 104685196 + Txnip protein_coding retained_intron MGP_CBAJ_T0062176.1 MGP_CBAJ_G0027298.1 mouse_genomes_project 3 104684693 104685387 + Txnip protein_coding processed_transcript MGP_CBAJ_T0062177.1 MGP_CBAJ_G0027298.1 mouse_genomes_project 3 104684905 104687052 + Txnip protein_coding processed_transcript MGP_CBAJ_T0062178.1 MGP_CBAJ_G0027298.1 mouse_genomes_project 3 104685236 104685757 + Txnip protein_coding retained_intron MGP_CBAJ_T0063492.1 MGP_CBAJ_G0027581.1 mouse_genomes_project 3 147899262 147925379 + MGP_CBAJ_P0063492 Slc9b1 protein_coding protein_coding MGP_CBAJ_T0063493.1 MGP_CBAJ_G0027581.1 mouse_genomes_project 3 147899267 147954407 + MGP_CBAJ_P0063493 Slc9b1 protein_coding protein_coding MGP_CBAJ_T0063494.1 MGP_CBAJ_G0027581.1 mouse_genomes_project 3 147899279 147910406 + Slc9b1 protein_coding retained_intron MGP_CBAJ_T0063495.1 MGP_CBAJ_G0027581.1 mouse_genomes_project 3 147899279 147910645 + Slc9b1 protein_coding retained_intron MGP_CBAJ_T0063496.1 MGP_CBAJ_G0027581.1 mouse_genomes_project 3 147899291 147949663 + Slc9b1 protein_coding processed_transcript MGP_CBAJ_T0063497.1 MGP_CBAJ_G0027581.1 mouse_genomes_project 3 147899563 147931400 + Slc9b1 protein_coding retained_intron MGP_CBAJ_T0063498.1 MGP_CBAJ_G0027581.1 mouse_genomes_project 3 147927743 147931124 + Slc9b1 protein_coding retained_intron MGP_CBAJ_T0063499.1 MGP_CBAJ_G0027581.1 mouse_genomes_project 3 147939434 147954404 + MGP_CBAJ_P0063499 Slc9b1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063500.1 MGP_CBAJ_G0027581.1 mouse_genomes_project 3 147950583 147954404 + Slc9b1 protein_coding processed_transcript MGP_CBAJ_T0007455.1 MGP_CBAJ_G0006097.1 mouse_genomes_project 3 60819842 60824413 - Gm42512 lincRNA lincRNA MGP_CBAJ_T0098378.1 MGP_CBAJ_G0036644.1 mouse_genomes_project 3 157809282 157811373 - Gm43445 sense_intronic sense_intronic MGP_CBAJ_T0062372.1 MGP_CBAJ_G0027351.1 mouse_genomes_project 3 109972104 109974562 + Igsf3 protein_coding retained_intron MGP_CBAJ_T0062373.1 MGP_CBAJ_G0027351.1 mouse_genomes_project 3 109972104 110066764 + MGP_CBAJ_P0062373 Igsf3 protein_coding protein_coding MGP_CBAJ_T0062374.1 MGP_CBAJ_G0027351.1 mouse_genomes_project 3 109973359 110063854 + MGP_CBAJ_P0062374 Igsf3 protein_coding protein_coding MGP_CBAJ_T0059745.1 MGP_CBAJ_G0026782.1 mouse_genomes_project 3 17812283 17842765 + MGP_CBAJ_P0059745 Mtfr1 protein_coding protein_coding MGP_CBAJ_T0059746.1 MGP_CBAJ_G0026782.1 mouse_genomes_project 3 17812285 17846789 + MGP_CBAJ_P0059746 Mtfr1 protein_coding protein_coding MGP_CBAJ_T0059747.1 MGP_CBAJ_G0026782.1 mouse_genomes_project 3 17812303 17846440 + MGP_CBAJ_P0059747 Mtfr1 protein_coding protein_coding MGP_CBAJ_T0059748.1 MGP_CBAJ_G0026782.1 mouse_genomes_project 3 17813066 17847887 + MGP_CBAJ_P0059748 Mtfr1 protein_coding protein_coding MGP_CBAJ_T0059749.1 MGP_CBAJ_G0026782.1 mouse_genomes_project 3 17813147 17847874 + MGP_CBAJ_P0059749 Mtfr1 protein_coding unknown_likely_coding MGP_CBAJ_T0059750.1 MGP_CBAJ_G0026782.1 mouse_genomes_project 3 17813221 17846626 + MGP_CBAJ_P0059750 Mtfr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059751.1 MGP_CBAJ_G0026782.1 mouse_genomes_project 3 17813230 17842774 + MGP_CBAJ_P0059751 Mtfr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059752.1 MGP_CBAJ_G0026782.1 mouse_genomes_project 3 17813270 17838630 + MGP_CBAJ_P0059752 Mtfr1 protein_coding protein_coding MGP_CBAJ_T0059753.1 MGP_CBAJ_G0026782.1 mouse_genomes_project 3 17838650 17843292 + Mtfr1 protein_coding retained_intron MGP_CBAJ_T0060590.1 MGP_CBAJ_G0026936.1 mouse_genomes_project 3 62189965 62191157 - Gpr87 protein_coding retained_intron MGP_CBAJ_T0060591.1 MGP_CBAJ_G0026936.1 mouse_genomes_project 3 62189965 62206147 - MGP_CBAJ_P0060591 Gpr87 protein_coding protein_coding MGP_CBAJ_T0060592.1 MGP_CBAJ_G0026936.1 mouse_genomes_project 3 62190048 62191128 - MGP_CBAJ_P0060592 Gpr87 protein_coding protein_coding MGP_CBAJ_T0063005.1 MGP_CBAJ_G0027491.1 mouse_genomes_project 3 127081066 127115231 - MGP_CBAJ_P0063005 Mfsd14a protein_coding protein_coding MGP_CBAJ_T0063006.1 MGP_CBAJ_G0027491.1 mouse_genomes_project 3 127082503 127086391 - Mfsd14a protein_coding retained_intron MGP_CBAJ_T0063007.1 MGP_CBAJ_G0027491.1 mouse_genomes_project 3 127091255 127095693 - Mfsd14a protein_coding retained_intron MGP_CBAJ_T0063009.1 MGP_CBAJ_G0027491.1 mouse_genomes_project 3 127098079 127115045 - Mfsd14a protein_coding retained_intron MGP_CBAJ_T0063010.1 MGP_CBAJ_G0027491.1 mouse_genomes_project 3 127100839 127115164 - Mfsd14a protein_coding retained_intron MGP_CBAJ_T0100484.1 MGP_CBAJ_G0038739.1 mouse_genomes_project 3 126440703 126440835 - Gm26344 snoRNA snoRNA MGP_CBAJ_T0004217.1 MGP_CBAJ_G0003701.1 mouse_genomes_project 3 103864170 103882759 + C920021L13Rik antisense antisense MGP_CBAJ_T0004218.1 MGP_CBAJ_G0003701.1 mouse_genomes_project 3 103864173 103883896 + C920021L13Rik antisense antisense MGP_CBAJ_T0004219.1 MGP_CBAJ_G0003701.1 mouse_genomes_project 3 103864179 103867539 + C920021L13Rik antisense antisense MGP_CBAJ_T0060965.1 MGP_CBAJ_G0027028.1 mouse_genomes_project 3 89681591 89689591 + MGP_CBAJ_P0060965 Sfrp2 protein_coding protein_coding MGP_CBAJ_T0060966.1 MGP_CBAJ_G0027028.1 mouse_genomes_project 3 89681835 89685414 + Sfrp2 protein_coding processed_transcript MGP_CBAJ_T0060967.1 MGP_CBAJ_G0027028.1 mouse_genomes_project 3 89682123 89687424 + Sfrp2 protein_coding processed_transcript MGP_CBAJ_T0001250.1 MGP_CBAJ_G0001177.1 mouse_genomes_project 3 119998566 120002531 - TEC TEC MGP_CBAJ_T0010377.1 MGP_CBAJ_G0008515.1 mouse_genomes_project 3 27919080 27919154 + Mir466q miRNA miRNA MGP_CBAJ_T0063937.1 MGP_CBAJ_G0027665.1 mouse_genomes_project 3 167018836 167050350 - MGP_CBAJ_P0063937 Nexn protein_coding protein_coding MGP_CBAJ_T0063938.1 MGP_CBAJ_G0027665.1 mouse_genomes_project 3 167019204 167040110 - MGP_CBAJ_P0063938 Nexn protein_coding protein_coding MGP_CBAJ_T0063939.1 MGP_CBAJ_G0027665.1 mouse_genomes_project 3 167019469 167030069 - MGP_CBAJ_P0063939 Nexn protein_coding protein_coding MGP_CBAJ_T0063940.1 MGP_CBAJ_G0027665.1 mouse_genomes_project 3 167019506 167040110 - MGP_CBAJ_P0063940 Nexn protein_coding protein_coding MGP_CBAJ_T0063941.1 MGP_CBAJ_G0027665.1 mouse_genomes_project 3 167020107 167026633 - Nexn protein_coding processed_transcript MGP_CBAJ_T0063942.1 MGP_CBAJ_G0027665.1 mouse_genomes_project 3 167024558 167025955 - Nexn protein_coding retained_intron MGP_CBAJ_T0063943.1 MGP_CBAJ_G0027665.1 mouse_genomes_project 3 167025774 167050351 - MGP_CBAJ_P0063943 Nexn protein_coding protein_coding MGP_CBAJ_T0063944.1 MGP_CBAJ_G0027665.1 mouse_genomes_project 3 167025830 167040164 - MGP_CBAJ_P0063944 Nexn protein_coding protein_coding MGP_CBAJ_T0063945.1 MGP_CBAJ_G0027665.1 mouse_genomes_project 3 167029825 167030269 - Nexn protein_coding retained_intron MGP_CBAJ_T0063946.1 MGP_CBAJ_G0027665.1 mouse_genomes_project 3 167029836 167050378 - MGP_CBAJ_P0063946 Nexn protein_coding nonsense_mediated_decay MGP_CBAJ_T0063947.1 MGP_CBAJ_G0027665.1 mouse_genomes_project 3 167029867 167048084 - MGP_CBAJ_P0063947 Nexn protein_coding protein_coding MGP_CBAJ_T0063948.1 MGP_CBAJ_G0027665.1 mouse_genomes_project 3 167029885 167046120 - MGP_CBAJ_P0063948 Nexn protein_coding protein_coding MGP_CBAJ_T0063949.1 MGP_CBAJ_G0027665.1 mouse_genomes_project 3 167029987 167047108 - MGP_CBAJ_P0063949 Nexn protein_coding protein_coding MGP_CBAJ_T0063950.1 MGP_CBAJ_G0027665.1 mouse_genomes_project 3 167034309 167050933 - Nexn protein_coding retained_intron MGP_CBAJ_T0063951.1 MGP_CBAJ_G0027665.1 mouse_genomes_project 3 167034522 167034891 - Nexn protein_coding retained_intron MGP_CBAJ_T0004237.1 MGP_CBAJ_G0003714.1 mouse_genomes_project 3 111532198 111533814 - Gm42681 antisense antisense MGP_CBAJ_T0060751.1 MGP_CBAJ_G0026975.1 mouse_genomes_project 3 71388952 71413950 + MGP_CBAJ_P0060751 Mfsd1 protein_coding protein_coding MGP_CBAJ_T0060752.1 MGP_CBAJ_G0026975.1 mouse_genomes_project 3 71390957 71405921 + Mfsd1 protein_coding processed_transcript MGP_CBAJ_T0004283.1 MGP_CBAJ_G0003740.1 mouse_genomes_project 3 138808812 138815640 + Gm16958 antisense antisense MGP_CBAJ_T0004284.1 MGP_CBAJ_G0003740.1 mouse_genomes_project 3 138808846 138814669 + Gm16958 antisense antisense MGP_CBAJ_T0013910.1 MGP_CBAJ_G0012022.1 mouse_genomes_project 3 72243921 72244506 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0060739.1 MGP_CBAJ_G0026971.1 mouse_genomes_project 3 71161773 71196262 + MGP_CBAJ_P0060739 Mlf1 protein_coding protein_coding MGP_CBAJ_T0060740.1 MGP_CBAJ_G0026971.1 mouse_genomes_project 3 71161801 71171367 + Mlf1 protein_coding processed_transcript MGP_CBAJ_T0060741.1 MGP_CBAJ_G0026971.1 mouse_genomes_project 3 71161818 71189277 + MGP_CBAJ_P0060741 Mlf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060742.1 MGP_CBAJ_G0026971.1 mouse_genomes_project 3 71161824 71196267 + MGP_CBAJ_P0060742 Mlf1 protein_coding protein_coding MGP_CBAJ_T0004189.1 MGP_CBAJ_G0003682.1 mouse_genomes_project 3 93058943 93069537 - Gm37876 antisense antisense MGP_CBAJ_T0001142.1 MGP_CBAJ_G0001071.1 mouse_genomes_project 3 52729230 52732934 - TEC TEC MGP_CBAJ_T0007464.1 MGP_CBAJ_G0006104.1 mouse_genomes_project 3 71357749 71359848 - Gm35299 lincRNA lincRNA MGP_CBAJ_T0063832.1 MGP_CBAJ_G0027650.1 mouse_genomes_project 3 160559639 160575079 - MGP_CBAJ_P0063832 Rpf1 protein_coding protein_coding MGP_CBAJ_T0063833.1 MGP_CBAJ_G0027650.1 mouse_genomes_project 3 160560027 160561908 - MGP_CBAJ_P0063833 Rpf1 protein_coding protein_coding MGP_CBAJ_T0063834.1 MGP_CBAJ_G0027650.1 mouse_genomes_project 3 160560106 160562176 - Rpf1 protein_coding retained_intron MGP_CBAJ_T0063835.1 MGP_CBAJ_G0027650.1 mouse_genomes_project 3 160561856 160574701 - Rpf1 protein_coding processed_transcript MGP_CBAJ_T0063836.1 MGP_CBAJ_G0027650.1 mouse_genomes_project 3 160564478 160575061 - MGP_CBAJ_P0063836 Rpf1 protein_coding protein_coding MGP_CBAJ_T0014143.1 MGP_CBAJ_G0012255.1 mouse_genomes_project 3 149024224 149024383 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007625.1 MGP_CBAJ_G0006231.1 mouse_genomes_project 3 152859329 152864783 - Gm32693 lincRNA lincRNA MGP_CBAJ_T0011414.1 MGP_CBAJ_G0009552.1 mouse_genomes_project 3 84177083 84177426 + Gm24749 misc_RNA misc_RNA MGP_CBAJ_T0011401.1 MGP_CBAJ_G0009539.1 mouse_genomes_project 3 6865862 6866171 + Gm22604 misc_RNA misc_RNA MGP_CBAJ_T0062778.1 MGP_CBAJ_G0027443.1 mouse_genomes_project 3 117600487 117645576 - MGP_CBAJ_P0062778 Gnai3 protein_coding protein_coding MGP_CBAJ_T0001238.1 MGP_CBAJ_G0001165.1 mouse_genomes_project 3 106345225 106350346 + TEC TEC MGP_CBAJ_T0101113.1 MGP_CBAJ_G0039311.1 mouse_genomes_project 3 140728747 140729433 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0013920.1 MGP_CBAJ_G0012032.1 mouse_genomes_project 3 74057545 74057745 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061113.1 MGP_CBAJ_G0027059.1 mouse_genomes_project 3 94206775 94226301 - MGP_CBAJ_P0061113 Ntrk1 protein_coding protein_coding MGP_CBAJ_T0061797.1 MGP_CBAJ_G0027225.1 mouse_genomes_project 3 101038213 101049214 + MGP_CBAJ_P0061797 S100a10 protein_coding protein_coding MGP_CBAJ_T0061798.1 MGP_CBAJ_G0027225.1 mouse_genomes_project 3 101038296 101044645 + S100a10 protein_coding retained_intron MGP_CBAJ_T0061799.1 MGP_CBAJ_G0027225.1 mouse_genomes_project 3 101043866 101049021 + MGP_CBAJ_P0061799 S100a10 protein_coding protein_coding MGP_CBAJ_T0063462.1 MGP_CBAJ_G0027575.1 mouse_genomes_project 3 145810139 145918562 - MGP_CBAJ_P0063462 Tet2 protein_coding protein_coding MGP_CBAJ_T0063463.1 MGP_CBAJ_G0027575.1 mouse_genomes_project 3 145810143 145825721 - Tet2 protein_coding retained_intron MGP_CBAJ_T0063464.1 MGP_CBAJ_G0027575.1 mouse_genomes_project 3 145810299 145918540 - MGP_CBAJ_P0063464 Tet2 protein_coding protein_coding MGP_CBAJ_T0063465.1 MGP_CBAJ_G0027575.1 mouse_genomes_project 3 145814729 145820700 - Tet2 protein_coding retained_intron MGP_CBAJ_T0063466.1 MGP_CBAJ_G0027575.1 mouse_genomes_project 3 145816409 145827426 - MGP_CBAJ_P0063466 Tet2 protein_coding protein_coding MGP_CBAJ_T0063467.1 MGP_CBAJ_G0027575.1 mouse_genomes_project 3 145825930 145829782 - Tet2 protein_coding retained_intron MGP_CBAJ_T0063468.1 MGP_CBAJ_G0027575.1 mouse_genomes_project 3 145829911 145831554 - Tet2 protein_coding retained_intron MGP_CBAJ_T0063469.1 MGP_CBAJ_G0027575.1 mouse_genomes_project 3 145849321 145919311 - MGP_CBAJ_P0063469 Tet2 protein_coding protein_coding MGP_CBAJ_T0063470.1 MGP_CBAJ_G0027575.1 mouse_genomes_project 3 145879663 145918474 - Tet2 protein_coding retained_intron MGP_CBAJ_T0063471.1 MGP_CBAJ_G0027575.1 mouse_genomes_project 3 145912936 145918458 - Tet2 protein_coding processed_transcript MGP_CBAJ_T0061522.1 MGP_CBAJ_G0027131.1 mouse_genomes_project 3 96256971 96272568 + MGP_CBAJ_P0061522 Pmvk protein_coding protein_coding MGP_CBAJ_T0061523.1 MGP_CBAJ_G0027131.1 mouse_genomes_project 3 96257010 96272580 + MGP_CBAJ_P0061523 Pmvk protein_coding protein_coding MGP_CBAJ_T0061524.1 MGP_CBAJ_G0027131.1 mouse_genomes_project 3 96257211 96272570 + MGP_CBAJ_P0061524 Pmvk protein_coding protein_coding MGP_CBAJ_T0013926.1 MGP_CBAJ_G0012038.1 mouse_genomes_project 3 76025027 76030064 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0060127.1 MGP_CBAJ_G0026849.1 mouse_genomes_project 3 36553418 36604399 - MGP_CBAJ_P0060127 Qrfpr protein_coding protein_coding MGP_CBAJ_T0060128.1 MGP_CBAJ_G0026849.1 mouse_genomes_project 3 36561362 36604340 - Qrfpr protein_coding retained_intron MGP_CBAJ_T0001221.1 MGP_CBAJ_G0001148.1 mouse_genomes_project 3 95977019 95979760 + TEC TEC MGP_CBAJ_T0100487.1 MGP_CBAJ_G0038742.1 mouse_genomes_project 3 131569897 131570025 - Gm25013 snoRNA snoRNA MGP_CBAJ_T0062633.1 MGP_CBAJ_G0027404.1 mouse_genomes_project 3 115153316 115168986 - MGP_CBAJ_P0062633 Pifo protein_coding protein_coding MGP_CBAJ_T0062634.1 MGP_CBAJ_G0027404.1 mouse_genomes_project 3 115153325 115166656 - MGP_CBAJ_P0062634 Pifo protein_coding protein_coding MGP_CBAJ_T0007344.1 MGP_CBAJ_G0006017.1 mouse_genomes_project 3 5150931 5184077 - 1700010I02Rik lincRNA lincRNA MGP_CBAJ_T0007345.1 MGP_CBAJ_G0006017.1 mouse_genomes_project 3 5150931 5184084 - 1700010I02Rik lincRNA lincRNA MGP_CBAJ_T0063633.1 MGP_CBAJ_G0027609.1 mouse_genomes_project 3 151454421 151490421 + MGP_CBAJ_P0063633 Eif4e protein_coding protein_coding MGP_CBAJ_T0063634.1 MGP_CBAJ_G0027609.1 mouse_genomes_project 3 151454667 151486132 + MGP_CBAJ_P0063634 Eif4e protein_coding protein_coding MGP_CBAJ_T0063635.1 MGP_CBAJ_G0027609.1 mouse_genomes_project 3 151455517 151486947 + MGP_CBAJ_P0063635 Eif4e protein_coding protein_coding MGP_CBAJ_T0063636.1 MGP_CBAJ_G0027609.1 mouse_genomes_project 3 151455517 151486291 + MGP_CBAJ_P0063636 Eif4e protein_coding protein_coding MGP_CBAJ_T0063637.1 MGP_CBAJ_G0027609.1 mouse_genomes_project 3 151455528 151486407 + MGP_CBAJ_P0063637 Eif4e protein_coding protein_coding MGP_CBAJ_T0063638.1 MGP_CBAJ_G0027609.1 mouse_genomes_project 3 151481589 151484458 + Eif4e protein_coding retained_intron MGP_CBAJ_T0101877.1 MGP_CBAJ_G0039908.1 mouse_genomes_project 3 133252493 133378853 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0061725.1 MGP_CBAJ_G0027168.1 mouse_genomes_project 3 97599323 97603682 + MGP_CBAJ_P0061725 S100a7a protein_coding protein_coding MGP_CBAJ_T0014176.1 MGP_CBAJ_G0012288.1 mouse_genomes_project 3 160887556 160888235 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099208.1 MGP_CBAJ_G0037463.1 mouse_genomes_project 3 113600135 113600217 - Gm26091 snRNA snRNA MGP_CBAJ_T0061527.1 MGP_CBAJ_G0027133.1 mouse_genomes_project 3 96551760 96553433 + Adar protein_coding retained_intron MGP_CBAJ_T0061528.1 MGP_CBAJ_G0027133.1 mouse_genomes_project 3 96552070 96574050 + Adar protein_coding processed_transcript MGP_CBAJ_T0061529.1 MGP_CBAJ_G0027133.1 mouse_genomes_project 3 96569650 96592743 + MGP_CBAJ_P0061529 Adar protein_coding protein_coding MGP_CBAJ_T0061530.1 MGP_CBAJ_G0027133.1 mouse_genomes_project 3 96569650 96592743 + MGP_CBAJ_P0061530 Adar protein_coding protein_coding MGP_CBAJ_T0061531.1 MGP_CBAJ_G0027133.1 mouse_genomes_project 3 96569650 96592743 + MGP_CBAJ_P0061531 Adar protein_coding protein_coding MGP_CBAJ_T0061532.1 MGP_CBAJ_G0027133.1 mouse_genomes_project 3 96569713 96592512 + MGP_CBAJ_P0061532 Adar protein_coding protein_coding MGP_CBAJ_T0061533.1 MGP_CBAJ_G0027133.1 mouse_genomes_project 3 96576482 96578186 + Adar protein_coding retained_intron MGP_CBAJ_T0061534.1 MGP_CBAJ_G0027133.1 mouse_genomes_project 3 96586981 96588548 + Adar protein_coding retained_intron MGP_CBAJ_T0101841.1 MGP_CBAJ_G0039872.1 mouse_genomes_project 3 22031107 22033610 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0060231.1 MGP_CBAJ_G0026869.1 mouse_genomes_project 3 41346970 41369327 + MGP_CBAJ_P0060231 Intu protein_coding protein_coding MGP_CBAJ_T0060232.1 MGP_CBAJ_G0026869.1 mouse_genomes_project 3 41356513 41425540 + MGP_CBAJ_P0060232 Intu protein_coding protein_coding MGP_CBAJ_T0060233.1 MGP_CBAJ_G0026869.1 mouse_genomes_project 3 41393795 41413676 + MGP_CBAJ_P0060233 Intu protein_coding protein_coding MGP_CBAJ_T0101854.1 MGP_CBAJ_G0039885.1 mouse_genomes_project 3 89740439 89762492 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0060530.1 MGP_CBAJ_G0026922.1 mouse_genomes_project 3 60466671 60473793 - MGP_CBAJ_P0060530 Commd2 protein_coding protein_coding MGP_CBAJ_T0060531.1 MGP_CBAJ_G0026922.1 mouse_genomes_project 3 60468681 60473786 - MGP_CBAJ_P0060531 Commd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060532.1 MGP_CBAJ_G0026922.1 mouse_genomes_project 3 60473179 60473793 - Commd2 protein_coding retained_intron MGP_CBAJ_T0062814.1 MGP_CBAJ_G0027453.1 mouse_genomes_project 3 117934429 117960250 - MGP_CBAJ_P0062814 Celsr2 protein_coding protein_coding MGP_CBAJ_T0062815.1 MGP_CBAJ_G0027453.1 mouse_genomes_project 3 117935800 117942530 - MGP_CBAJ_P0062815 Celsr2 protein_coding protein_coding MGP_CBAJ_T0062816.1 MGP_CBAJ_G0027453.1 mouse_genomes_project 3 117935957 117937012 - Celsr2 protein_coding processed_transcript MGP_CBAJ_T0062817.1 MGP_CBAJ_G0027453.1 mouse_genomes_project 3 117936178 117937103 - Celsr2 protein_coding retained_intron MGP_CBAJ_T0062818.1 MGP_CBAJ_G0027453.1 mouse_genomes_project 3 117937113 117937881 - Celsr2 protein_coding retained_intron MGP_CBAJ_T0062819.1 MGP_CBAJ_G0027453.1 mouse_genomes_project 3 117939138 117940072 - Celsr2 protein_coding retained_intron MGP_CBAJ_T0062820.1 MGP_CBAJ_G0027453.1 mouse_genomes_project 3 117944838 117946168 - Celsr2 protein_coding retained_intron MGP_CBAJ_T0013918.1 MGP_CBAJ_G0012030.1 mouse_genomes_project 3 73782504 73783010 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004209.1 MGP_CBAJ_G0003697.1 mouse_genomes_project 3 102821102 102823689 - A730011C13Rik antisense antisense MGP_CBAJ_T0004210.1 MGP_CBAJ_G0003697.1 mouse_genomes_project 3 102821735 102824043 - A730011C13Rik antisense antisense MGP_CBAJ_T0013955.1 MGP_CBAJ_G0012067.1 mouse_genomes_project 3 88387674 88388173 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001098.1 MGP_CBAJ_G0001027.1 mouse_genomes_project 3 31857908 31860866 + TEC TEC MGP_CBAJ_T0013732.1 MGP_CBAJ_G0011844.1 mouse_genomes_project 3 8722957 8723711 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001277.1 MGP_CBAJ_G0001204.1 mouse_genomes_project 3 135720731 135721666 - TEC TEC MGP_CBAJ_T0060356.1 MGP_CBAJ_G0026887.1 mouse_genomes_project 3 53474591 53483789 - MGP_CBAJ_P0060356 Mgarp protein_coding protein_coding MGP_CBAJ_T0060357.1 MGP_CBAJ_G0026887.1 mouse_genomes_project 3 53474591 53483979 - MGP_CBAJ_P0060357 Mgarp protein_coding protein_coding MGP_CBAJ_T0060358.1 MGP_CBAJ_G0026887.1 mouse_genomes_project 3 53474591 53483767 - MGP_CBAJ_P0060358 Mgarp protein_coding protein_coding MGP_CBAJ_T0060359.1 MGP_CBAJ_G0026887.1 mouse_genomes_project 3 53476980 53483744 - Mgarp protein_coding retained_intron MGP_CBAJ_T0060360.1 MGP_CBAJ_G0026887.1 mouse_genomes_project 3 53477421 53483729 - Mgarp protein_coding processed_transcript MGP_CBAJ_T0101862.1 MGP_CBAJ_G0039893.1 mouse_genomes_project 3 97946112 97953210 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013806.1 MGP_CBAJ_G0011918.1 mouse_genomes_project 3 37565268 37566122 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004164.1 MGP_CBAJ_G0003663.1 mouse_genomes_project 3 57958260 57983893 - Gm42609 antisense antisense MGP_CBAJ_T0004165.1 MGP_CBAJ_G0003663.1 mouse_genomes_project 3 57961059 57981795 - Gm42609 antisense antisense MGP_CBAJ_T0063190.1 MGP_CBAJ_G0027526.1 mouse_genomes_project 3 134711220 134773386 + MGP_CBAJ_P0063190 Prss12 protein_coding protein_coding MGP_CBAJ_T0098372.1 MGP_CBAJ_G0036638.1 mouse_genomes_project 3 114887219 114890559 - Gm43329 sense_intronic sense_intronic MGP_CBAJ_T0059982.1 MGP_CBAJ_G0026824.1 mouse_genomes_project 3 30956320 30970723 + MGP_CBAJ_P0059982 Cldn11 protein_coding protein_coding MGP_CBAJ_T0063454.1 MGP_CBAJ_G0027574.1 mouse_genomes_project 3 145635467 145706431 + MGP_CBAJ_P0063454 Ppa2 protein_coding protein_coding MGP_CBAJ_T0063455.1 MGP_CBAJ_G0027574.1 mouse_genomes_project 3 145635479 145706588 + MGP_CBAJ_P0063455 Ppa2 protein_coding protein_coding MGP_CBAJ_T0063456.1 MGP_CBAJ_G0027574.1 mouse_genomes_project 3 145635839 145698796 + Ppa2 protein_coding processed_transcript MGP_CBAJ_T0063457.1 MGP_CBAJ_G0027574.1 mouse_genomes_project 3 145646733 145651833 + Ppa2 protein_coding retained_intron MGP_CBAJ_T0063458.1 MGP_CBAJ_G0027574.1 mouse_genomes_project 3 145664114 145696298 + Ppa2 protein_coding processed_transcript MGP_CBAJ_T0063459.1 MGP_CBAJ_G0027574.1 mouse_genomes_project 3 145664287 145706435 + Ppa2 protein_coding retained_intron MGP_CBAJ_T0063460.1 MGP_CBAJ_G0027574.1 mouse_genomes_project 3 145673192 145706420 + MGP_CBAJ_P0063460 Ppa2 protein_coding protein_coding MGP_CBAJ_T0063461.1 MGP_CBAJ_G0027574.1 mouse_genomes_project 3 145700762 145702796 + Ppa2 protein_coding retained_intron MGP_CBAJ_T0013875.1 MGP_CBAJ_G0011987.1 mouse_genomes_project 3 61210277 61210649 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060770.1 MGP_CBAJ_G0026981.1 mouse_genomes_project 3 72821854 72824432 + MGP_CBAJ_P0060770 1110032F04Rik protein_coding protein_coding MGP_CBAJ_T0062298.1 MGP_CBAJ_G0027328.1 mouse_genomes_project 3 106555156 106569750 + MGP_CBAJ_P0062298 Reg4 protein_coding protein_coding MGP_CBAJ_T0013991.1 MGP_CBAJ_G0012103.1 mouse_genomes_project 3 100882565 100883348 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001161.1 MGP_CBAJ_G0001089.1 mouse_genomes_project 3 54034461 54037077 - TEC TEC MGP_CBAJ_T0063563.1 MGP_CBAJ_G0027592.1 mouse_genomes_project 3 150458340 150462114 + Ddit4l protein_coding processed_transcript MGP_CBAJ_T0063564.1 MGP_CBAJ_G0027592.1 mouse_genomes_project 3 150460391 150465062 + MGP_CBAJ_P0063564 Ddit4l protein_coding protein_coding MGP_CBAJ_T0063565.1 MGP_CBAJ_G0027592.1 mouse_genomes_project 3 150460756 150462889 + MGP_CBAJ_P0063565 Ddit4l protein_coding protein_coding MGP_CBAJ_T0013809.1 MGP_CBAJ_G0011921.1 mouse_genomes_project 3 37808003 37808322 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007527.1 MGP_CBAJ_G0006150.1 mouse_genomes_project 3 104446273 104469255 + lincRNA lincRNA MGP_CBAJ_T0010428.1 MGP_CBAJ_G0008566.1 mouse_genomes_project 3 139288093 139288168 + Mir367 miRNA miRNA MGP_CBAJ_T0062166.1 MGP_CBAJ_G0027293.1 mouse_genomes_project 3 104320266 104322007 - MGP_CBAJ_P0062166 Hist2h4 protein_coding protein_coding MGP_CBAJ_T0007440.1 MGP_CBAJ_G0006086.1 mouse_genomes_project 3 54350208 54357936 - Gm30074 lincRNA lincRNA MGP_CBAJ_T0059653.1 MGP_CBAJ_G0026748.1 mouse_genomes_project 3 6889600 7108118 - MGP_CBAJ_P0059653 Zfp704 protein_coding protein_coding MGP_CBAJ_T0059654.1 MGP_CBAJ_G0026748.1 mouse_genomes_project 3 6900912 7048546 - MGP_CBAJ_P0059654 Zfp704 protein_coding protein_coding MGP_CBAJ_T0059655.1 MGP_CBAJ_G0026748.1 mouse_genomes_project 3 6901320 6903661 - Zfp704 protein_coding retained_intron MGP_CBAJ_T0001262.1 MGP_CBAJ_G0001189.1 mouse_genomes_project 3 132131076 132133693 + TEC TEC MGP_CBAJ_T0099171.1 MGP_CBAJ_G0037426.1 mouse_genomes_project 3 66903375 66903481 + Gm24946 snRNA snRNA MGP_CBAJ_T0100494.1 MGP_CBAJ_G0038749.1 mouse_genomes_project 3 145971110 145971242 - Gm23011 snoRNA snoRNA MGP_CBAJ_T0063398.1 MGP_CBAJ_G0027561.1 mouse_genomes_project 3 143276912 143405955 + MGP_CBAJ_P0063398 Lef1 protein_coding protein_coding MGP_CBAJ_T0063399.1 MGP_CBAJ_G0027561.1 mouse_genomes_project 3 143276912 143405955 + MGP_CBAJ_P0063399 Lef1 protein_coding protein_coding MGP_CBAJ_T0063400.1 MGP_CBAJ_G0027561.1 mouse_genomes_project 3 143276912 143405955 + MGP_CBAJ_P0063400 Lef1 protein_coding protein_coding MGP_CBAJ_T0063401.1 MGP_CBAJ_G0027561.1 mouse_genomes_project 3 143279244 143283835 + Lef1 protein_coding retained_intron MGP_CBAJ_T0063402.1 MGP_CBAJ_G0027561.1 mouse_genomes_project 3 143279244 143405955 + MGP_CBAJ_P0063402 Lef1 protein_coding protein_coding MGP_CBAJ_T0063403.1 MGP_CBAJ_G0027561.1 mouse_genomes_project 3 143279253 143366071 + Lef1 protein_coding retained_intron MGP_CBAJ_T0063404.1 MGP_CBAJ_G0027561.1 mouse_genomes_project 3 143280261 143362733 + Lef1 protein_coding retained_intron MGP_CBAJ_T0063405.1 MGP_CBAJ_G0027561.1 mouse_genomes_project 3 143280303 143384386 + Lef1 protein_coding processed_transcript MGP_CBAJ_T0061373.1 MGP_CBAJ_G0027107.1 mouse_genomes_project 3 95920697 95936388 + MGP_CBAJ_P0061373 Clk2 protein_coding protein_coding MGP_CBAJ_T0061374.1 MGP_CBAJ_G0027107.1 mouse_genomes_project 3 95920719 95923107 + MGP_CBAJ_P0061374 Clk2 protein_coding protein_coding MGP_CBAJ_T0061375.1 MGP_CBAJ_G0027107.1 mouse_genomes_project 3 95920720 95936388 + MGP_CBAJ_P0061375 Clk2 protein_coding protein_coding MGP_CBAJ_T0061376.1 MGP_CBAJ_G0027107.1 mouse_genomes_project 3 95920721 95936386 + Clk2 protein_coding retained_intron MGP_CBAJ_T0061377.1 MGP_CBAJ_G0027107.1 mouse_genomes_project 3 95920721 95932924 + MGP_CBAJ_P0061377 Clk2 protein_coding protein_coding MGP_CBAJ_T0061378.1 MGP_CBAJ_G0027107.1 mouse_genomes_project 3 95920742 95936388 + MGP_CBAJ_P0061378 Clk2 protein_coding protein_coding MGP_CBAJ_T0061379.1 MGP_CBAJ_G0027107.1 mouse_genomes_project 3 95920881 95936388 + MGP_CBAJ_P0061379 Clk2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061380.1 MGP_CBAJ_G0027107.1 mouse_genomes_project 3 95923066 95926305 + Clk2 protein_coding retained_intron MGP_CBAJ_T0061381.1 MGP_CBAJ_G0027107.1 mouse_genomes_project 3 95931631 95935547 + Clk2 protein_coding retained_intron MGP_CBAJ_T0061382.1 MGP_CBAJ_G0027107.1 mouse_genomes_project 3 95933421 95935214 + Clk2 protein_coding retained_intron MGP_CBAJ_T0061383.1 MGP_CBAJ_G0027107.1 mouse_genomes_project 3 95934501 95935438 + Clk2 protein_coding processed_transcript MGP_CBAJ_T0099150.1 MGP_CBAJ_G0037405.1 mouse_genomes_project 3 16263086 16263213 - Gm23441 snRNA snRNA MGP_CBAJ_T0004308.1 MGP_CBAJ_G0003756.1 mouse_genomes_project 3 151160774 151191088 - Gm16559 antisense antisense MGP_CBAJ_T0062508.1 MGP_CBAJ_G0027377.1 mouse_genomes_project 3 112738990 112768089 + MGP_CBAJ_P0062508 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063911.1 MGP_CBAJ_G0027663.1 mouse_genomes_project 3 166960111 166992230 - Dnajb4 protein_coding processed_transcript MGP_CBAJ_T0063912.1 MGP_CBAJ_G0027663.1 mouse_genomes_project 3 166965553 166975382 - MGP_CBAJ_P0063912 Dnajb4 protein_coding protein_coding MGP_CBAJ_T0063913.1 MGP_CBAJ_G0027663.1 mouse_genomes_project 3 166965580 166992034 - MGP_CBAJ_P0063913 Dnajb4 protein_coding protein_coding MGP_CBAJ_T0063914.1 MGP_CBAJ_G0027663.1 mouse_genomes_project 3 166966679 166991970 - MGP_CBAJ_P0063914 Dnajb4 protein_coding protein_coding MGP_CBAJ_T0063915.1 MGP_CBAJ_G0027663.1 mouse_genomes_project 3 166974913 166992008 - Dnajb4 protein_coding processed_transcript MGP_CBAJ_T0063916.1 MGP_CBAJ_G0027663.1 mouse_genomes_project 3 166975099 166992008 - MGP_CBAJ_P0063916 Dnajb4 protein_coding protein_coding MGP_CBAJ_T0063917.1 MGP_CBAJ_G0027663.1 mouse_genomes_project 3 166987342 166992253 - Dnajb4 protein_coding retained_intron MGP_CBAJ_T0007682.1 MGP_CBAJ_G0006274.1 mouse_genomes_project 3 171266040 171272101 - Gm42947 lincRNA lincRNA MGP_CBAJ_T0063085.1 MGP_CBAJ_G0027506.1 mouse_genomes_project 3 132428964 132468550 + MGP_CBAJ_P0063085 Cnn3 protein_coding protein_coding MGP_CBAJ_T0063086.1 MGP_CBAJ_G0027506.1 mouse_genomes_project 3 132429012 132468542 + Cnn3 protein_coding retained_intron MGP_CBAJ_T0063087.1 MGP_CBAJ_G0027506.1 mouse_genomes_project 3 132429249 132468155 + MGP_CBAJ_P0063087 Cnn3 protein_coding protein_coding MGP_CBAJ_T0063088.1 MGP_CBAJ_G0027506.1 mouse_genomes_project 3 132429761 132455875 + Cnn3 protein_coding processed_transcript MGP_CBAJ_T0063089.1 MGP_CBAJ_G0027506.1 mouse_genomes_project 3 132455282 132465238 + MGP_CBAJ_P0063089 Cnn3 protein_coding protein_coding MGP_CBAJ_T0063090.1 MGP_CBAJ_G0027506.1 mouse_genomes_project 3 132459273 132467698 + Cnn3 protein_coding retained_intron MGP_CBAJ_T0063091.1 MGP_CBAJ_G0027506.1 mouse_genomes_project 3 132465178 132468291 + MGP_CBAJ_P0063091 Cnn3 protein_coding protein_coding MGP_CBAJ_T0063092.1 MGP_CBAJ_G0027506.1 mouse_genomes_project 3 132465207 132468293 + MGP_CBAJ_P0063092 Cnn3 protein_coding protein_coding MGP_CBAJ_T0001216.1 MGP_CBAJ_G0001143.1 mouse_genomes_project 3 90936229 90940117 + TEC TEC MGP_CBAJ_T0098340.1 MGP_CBAJ_G0036606.1 mouse_genomes_project 3 110221032 110222350 - Gm42941 sense_intronic sense_intronic MGP_CBAJ_T0010384.1 MGP_CBAJ_G0008522.1 mouse_genomes_project 3 35581824 35581916 + Gm25442 miRNA miRNA MGP_CBAJ_T0061349.1 MGP_CBAJ_G0027102.1 mouse_genomes_project 3 95822406 95842713 - MGP_CBAJ_P0061349 Gm43738 protein_coding protein_coding MGP_CBAJ_T0014155.1 MGP_CBAJ_G0012267.1 mouse_genomes_project 3 153257640 153259021 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010441.1 MGP_CBAJ_G0008579.1 mouse_genomes_project 3 172895931 172896002 + Mir186 miRNA miRNA MGP_CBAJ_T0001270.1 MGP_CBAJ_G0001197.1 mouse_genomes_project 3 133759730 133762279 - TEC TEC MGP_CBAJ_T0007536.1 MGP_CBAJ_G0006158.1 mouse_genomes_project 3 108886591 108887896 + Gm43121 lincRNA lincRNA MGP_CBAJ_T0001306.1 MGP_CBAJ_G0001232.1 mouse_genomes_project 3 141559449 141561120 + TEC TEC MGP_CBAJ_T0007631.1 MGP_CBAJ_G0006235.1 mouse_genomes_project 3 156447084 156457117 + 9530052C20Rik lincRNA lincRNA MGP_CBAJ_T0001298.1 MGP_CBAJ_G0001225.1 mouse_genomes_project 3 139501720 139503706 - TEC TEC MGP_CBAJ_T0001087.1 MGP_CBAJ_G0001016.1 mouse_genomes_project 3 27809405 27811143 + TEC TEC MGP_CBAJ_T0013967.1 MGP_CBAJ_G0012079.1 mouse_genomes_project 3 93400070 93400599 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098359.1 MGP_CBAJ_G0036625.1 mouse_genomes_project 3 113119695 113122972 - Gm43259 sense_intronic sense_intronic MGP_CBAJ_T0007579.1 MGP_CBAJ_G0006192.1 mouse_genomes_project 3 132667324 132675871 - A730020M07Rik lincRNA lincRNA MGP_CBAJ_T0007580.1 MGP_CBAJ_G0006192.1 mouse_genomes_project 3 132669514 132675874 - A730020M07Rik lincRNA lincRNA MGP_CBAJ_T0007581.1 MGP_CBAJ_G0006192.1 mouse_genomes_project 3 132669516 132675756 - A730020M07Rik lincRNA lincRNA MGP_CBAJ_T0014083.1 MGP_CBAJ_G0012195.1 mouse_genomes_project 3 127646944 127647625 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013841.1 MGP_CBAJ_G0011953.1 mouse_genomes_project 3 49741141 49741891 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011421.1 MGP_CBAJ_G0009559.1 mouse_genomes_project 3 116812879 116813212 - Gm24383 misc_RNA misc_RNA MGP_CBAJ_T0059698.1 MGP_CBAJ_G0026763.1 mouse_genomes_project 3 12592855 12625845 + MGP_CBAJ_P0059698 Slc7a12 protein_coding protein_coding MGP_CBAJ_T0059699.1 MGP_CBAJ_G0026763.1 mouse_genomes_project 3 12592858 12625739 + MGP_CBAJ_P0059699 Slc7a12 protein_coding protein_coding MGP_CBAJ_T0059700.1 MGP_CBAJ_G0026763.1 mouse_genomes_project 3 12592931 12625739 + MGP_CBAJ_P0059700 Slc7a12 protein_coding protein_coding MGP_CBAJ_T0063695.1 MGP_CBAJ_G0027622.1 mouse_genomes_project 3 156267097 156310790 + MGP_CBAJ_P0063695 Kyat3 protein_coding protein_coding MGP_CBAJ_T0063696.1 MGP_CBAJ_G0027622.1 mouse_genomes_project 3 156267126 156313137 + MGP_CBAJ_P0063696 Kyat3 protein_coding protein_coding MGP_CBAJ_T0063697.1 MGP_CBAJ_G0027622.1 mouse_genomes_project 3 156267132 156292154 + MGP_CBAJ_P0063697 Kyat3 protein_coding protein_coding MGP_CBAJ_T0063698.1 MGP_CBAJ_G0027622.1 mouse_genomes_project 3 156267140 156310601 + MGP_CBAJ_P0063698 Kyat3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063699.1 MGP_CBAJ_G0027622.1 mouse_genomes_project 3 156289084 156297356 + Kyat3 protein_coding processed_transcript MGP_CBAJ_T0063700.1 MGP_CBAJ_G0027622.1 mouse_genomes_project 3 156294468 156296424 + Kyat3 protein_coding retained_intron MGP_CBAJ_T0063701.1 MGP_CBAJ_G0027622.1 mouse_genomes_project 3 156303655 156306984 + Kyat3 protein_coding retained_intron MGP_CBAJ_T0063702.1 MGP_CBAJ_G0027622.1 mouse_genomes_project 3 156304555 156310599 + Kyat3 protein_coding processed_transcript MGP_CBAJ_T0101842.1 MGP_CBAJ_G0039873.1 mouse_genomes_project 3 62514306 62514571 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0063278.1 MGP_CBAJ_G0027538.1 mouse_genomes_project 3 139294350 139373537 + MGP_CBAJ_P0063278 Zgrf1 protein_coding unknown_likely_coding MGP_CBAJ_T0063279.1 MGP_CBAJ_G0027538.1 mouse_genomes_project 3 139297831 139374751 + MGP_CBAJ_P0063279 Zgrf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063280.1 MGP_CBAJ_G0027538.1 mouse_genomes_project 3 139297831 139374756 + MGP_CBAJ_P0063280 Zgrf1 protein_coding protein_coding MGP_CBAJ_T0063281.1 MGP_CBAJ_G0027538.1 mouse_genomes_project 3 139297844 139373868 + MGP_CBAJ_P0063281 Zgrf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063282.1 MGP_CBAJ_G0027538.1 mouse_genomes_project 3 139297844 139374759 + MGP_CBAJ_P0063282 Zgrf1 protein_coding protein_coding MGP_CBAJ_T0063283.1 MGP_CBAJ_G0027538.1 mouse_genomes_project 3 139297975 139310938 + MGP_CBAJ_P0063283 Zgrf1 protein_coding protein_coding MGP_CBAJ_T0063284.1 MGP_CBAJ_G0027538.1 mouse_genomes_project 3 139333357 139373719 + MGP_CBAJ_P0063284 Zgrf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0010420.1 MGP_CBAJ_G0008558.1 mouse_genomes_project 3 129143542 129143615 + Mir137 miRNA miRNA MGP_CBAJ_T0060516.1 MGP_CBAJ_G0026918.1 mouse_genomes_project 3 58402048 58404540 + MGP_CBAJ_P0060516 Mab21l1 protein_coding protein_coding MGP_CBAJ_T0101856.1 MGP_CBAJ_G0039887.1 mouse_genomes_project 3 94959299 94960412 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0061449.1 MGP_CBAJ_G0027116.1 mouse_genomes_project 3 96025733 96037218 + MGP_CBAJ_P0061449 Dpm3 protein_coding protein_coding MGP_CBAJ_T0061450.1 MGP_CBAJ_G0027116.1 mouse_genomes_project 3 96036692 96037218 + MGP_CBAJ_P0061450 Dpm3 protein_coding protein_coding MGP_CBAJ_T0061451.1 MGP_CBAJ_G0027116.1 mouse_genomes_project 3 96036779 96037220 + Dpm3 protein_coding retained_intron MGP_CBAJ_T0007459.1 MGP_CBAJ_G0006100.1 mouse_genomes_project 3 61648082 61752413 + 4930593A02Rik lincRNA lincRNA MGP_CBAJ_T0007460.1 MGP_CBAJ_G0006100.1 mouse_genomes_project 3 61690163 61761233 + 4930593A02Rik lincRNA lincRNA MGP_CBAJ_T0001191.1 MGP_CBAJ_G0001118.1 mouse_genomes_project 3 62682192 62684537 + TEC TEC MGP_CBAJ_T0007630.1 MGP_CBAJ_G0006234.1 mouse_genomes_project 3 154222330 154223703 + 4930590L14Rik lincRNA lincRNA MGP_CBAJ_T0063888.1 MGP_CBAJ_G0027658.1 mouse_genomes_project 3 166096747 166228907 + MGP_CBAJ_P0063888 Adgrl4 protein_coding protein_coding MGP_CBAJ_T0063889.1 MGP_CBAJ_G0027658.1 mouse_genomes_project 3 166096789 166176067 + MGP_CBAJ_P0063889 Adgrl4 protein_coding protein_coding MGP_CBAJ_T0063890.1 MGP_CBAJ_G0027658.1 mouse_genomes_project 3 166097134 166173863 + Adgrl4 protein_coding processed_transcript MGP_CBAJ_T0063891.1 MGP_CBAJ_G0027658.1 mouse_genomes_project 3 166097956 166176038 + Adgrl4 protein_coding retained_intron MGP_CBAJ_T0063892.1 MGP_CBAJ_G0027658.1 mouse_genomes_project 3 166175941 166184326 + Adgrl4 protein_coding processed_transcript MGP_CBAJ_T0063893.1 MGP_CBAJ_G0027658.1 mouse_genomes_project 3 166194314 166199032 + Adgrl4 protein_coding processed_transcript MGP_CBAJ_T0001227.1 MGP_CBAJ_G0001154.1 mouse_genomes_project 3 103548701 103550305 + TEC TEC MGP_CBAJ_T0062841.1 MGP_CBAJ_G0027459.1 mouse_genomes_project 3 118159152 118216585 + MGP_CBAJ_P0062841 Wdr47 protein_coding protein_coding MGP_CBAJ_T0062842.1 MGP_CBAJ_G0027459.1 mouse_genomes_project 3 118159225 118186533 + MGP_CBAJ_P0062842 Wdr47 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062843.1 MGP_CBAJ_G0027459.1 mouse_genomes_project 3 118159262 118183259 + Wdr47 protein_coding retained_intron MGP_CBAJ_T0062844.1 MGP_CBAJ_G0027459.1 mouse_genomes_project 3 118186729 118195552 + Wdr47 protein_coding processed_transcript MGP_CBAJ_T0062845.1 MGP_CBAJ_G0027459.1 mouse_genomes_project 3 118187110 118198436 + Wdr47 protein_coding retained_intron MGP_CBAJ_T0062846.1 MGP_CBAJ_G0027459.1 mouse_genomes_project 3 118194245 118204025 + Wdr47 protein_coding processed_transcript MGP_CBAJ_T0062847.1 MGP_CBAJ_G0027459.1 mouse_genomes_project 3 118198084 118208788 + Wdr47 protein_coding retained_intron MGP_CBAJ_T0062378.1 MGP_CBAJ_G0027353.1 mouse_genomes_project 3 110481057 110504204 - MGP_CBAJ_P0062378 Mab21l3 protein_coding protein_coding MGP_CBAJ_T0062379.1 MGP_CBAJ_G0027353.1 mouse_genomes_project 3 110481664 110522258 - MGP_CBAJ_P0062379 Mab21l3 protein_coding protein_coding MGP_CBAJ_T0061765.1 MGP_CBAJ_G0027201.1 mouse_genomes_project 3 100043732 100045398 - MGP_CBAJ_P0061765 Lce1f protein_coding protein_coding MGP_CBAJ_T0014092.1 MGP_CBAJ_G0012204.1 mouse_genomes_project 3 132377513 132377934 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0063247.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138532918 138613753 - MGP_CBAJ_P0063247 protein_coding protein_coding MGP_CBAJ_T0063248.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138532920 138535287 - protein_coding retained_intron MGP_CBAJ_T0063249.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138532920 138555448 - MGP_CBAJ_P0063249 protein_coding protein_coding MGP_CBAJ_T0063250.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138535226 138541921 - MGP_CBAJ_P0063250 protein_coding protein_coding MGP_CBAJ_T0063251.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138535227 138541921 - MGP_CBAJ_P0063251 protein_coding protein_coding MGP_CBAJ_T0063252.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138537709 138540477 - protein_coding retained_intron MGP_CBAJ_T0063253.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138545291 138547213 - protein_coding retained_intron MGP_CBAJ_T0063254.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138549833 138568117 - MGP_CBAJ_P0063254 protein_coding protein_coding MGP_CBAJ_T0063255.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138552180 138567916 - MGP_CBAJ_P0063255 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063256.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138559173 139107825 - MGP_CBAJ_P0063256 protein_coding protein_coding MGP_CBAJ_T0063257.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138562222 138613729 - protein_coding retained_intron MGP_CBAJ_T0063258.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138571070 139223724 - MGP_CBAJ_P0063258 protein_coding protein_coding MGP_CBAJ_T0063259.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138573543 139107764 - MGP_CBAJ_P0063259 protein_coding protein_coding MGP_CBAJ_T0063260.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138630518 138639456 - protein_coding retained_intron MGP_CBAJ_T0063261.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138639981 139107797 - MGP_CBAJ_P0063261 protein_coding protein_coding MGP_CBAJ_T0063262.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138640051 139107797 - MGP_CBAJ_P0063262 protein_coding protein_coding MGP_CBAJ_T0063263.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138655496 139107733 - MGP_CBAJ_P0063263 protein_coding protein_coding MGP_CBAJ_T0063264.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138655496 138809852 - MGP_CBAJ_P0063264 protein_coding protein_coding MGP_CBAJ_T0063265.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138719732 138886163 - MGP_CBAJ_P0063265 protein_coding protein_coding MGP_CBAJ_T0063266.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138720337 138809745 - protein_coding retained_intron MGP_CBAJ_T0063267.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138722147 139107720 - MGP_CBAJ_P0063267 protein_coding protein_coding MGP_CBAJ_T0063268.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 138807225 138809711 - protein_coding retained_intron MGP_CBAJ_T0063269.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 139010759 139107761 - protein_coding retained_intron MGP_CBAJ_T0063270.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 139012389 139223376 - protein_coding retained_intron MGP_CBAJ_T0063271.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 139220480 139223634 - protein_coding retained_intron MGP_CBAJ_T0063272.1 MGP_CBAJ_G0027535.1 mouse_genomes_project 3 139223036 139223375 - MGP_CBAJ_P0063272 protein_coding protein_coding MGP_CBAJ_T0061066.1 MGP_CBAJ_G0027053.1 mouse_genomes_project 3 93766425 93783285 + MGP_CBAJ_P0061066 Fcrl1 protein_coding protein_coding MGP_CBAJ_T0061067.1 MGP_CBAJ_G0027053.1 mouse_genomes_project 3 93766427 93783678 + MGP_CBAJ_P0061067 Fcrl1 protein_coding protein_coding MGP_CBAJ_T0061068.1 MGP_CBAJ_G0027053.1 mouse_genomes_project 3 93766486 93783679 + MGP_CBAJ_P0061068 Fcrl1 protein_coding protein_coding MGP_CBAJ_T0061069.1 MGP_CBAJ_G0027053.1 mouse_genomes_project 3 93766498 93795017 + MGP_CBAJ_P0061069 Fcrl1 protein_coding protein_coding MGP_CBAJ_T0061070.1 MGP_CBAJ_G0027053.1 mouse_genomes_project 3 93766505 93783299 + MGP_CBAJ_P0061070 Fcrl1 protein_coding protein_coding MGP_CBAJ_T0061071.1 MGP_CBAJ_G0027053.1 mouse_genomes_project 3 93766533 93782836 + MGP_CBAJ_P0061071 Fcrl1 protein_coding unknown_likely_coding MGP_CBAJ_T0061072.1 MGP_CBAJ_G0027053.1 mouse_genomes_project 3 93777172 93783643 + Fcrl1 protein_coding retained_intron MGP_CBAJ_T0013969.1 MGP_CBAJ_G0012081.1 mouse_genomes_project 3 94437017 94437438 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063971.1 MGP_CBAJ_G0027668.1 mouse_genomes_project 3 167191885 167268556 + MGP_CBAJ_P0063971 Zzz3 protein_coding protein_coding MGP_CBAJ_T0063972.1 MGP_CBAJ_G0027668.1 mouse_genomes_project 3 167191937 167237077 + Zzz3 protein_coding retained_intron MGP_CBAJ_T0063973.1 MGP_CBAJ_G0027668.1 mouse_genomes_project 3 167192415 167273613 + MGP_CBAJ_P0063973 Zzz3 protein_coding protein_coding MGP_CBAJ_T0063974.1 MGP_CBAJ_G0027668.1 mouse_genomes_project 3 167192444 167258351 + Zzz3 protein_coding processed_transcript MGP_CBAJ_T0063975.1 MGP_CBAJ_G0027668.1 mouse_genomes_project 3 167192491 167258049 + Zzz3 protein_coding processed_transcript MGP_CBAJ_T0063976.1 MGP_CBAJ_G0027668.1 mouse_genomes_project 3 167192543 167268634 + MGP_CBAJ_P0063976 Zzz3 protein_coding protein_coding MGP_CBAJ_T0063977.1 MGP_CBAJ_G0027668.1 mouse_genomes_project 3 167193090 167268559 + MGP_CBAJ_P0063977 Zzz3 protein_coding protein_coding MGP_CBAJ_T0063978.1 MGP_CBAJ_G0027668.1 mouse_genomes_project 3 167193100 167273613 + MGP_CBAJ_P0063978 Zzz3 protein_coding protein_coding MGP_CBAJ_T0063979.1 MGP_CBAJ_G0027668.1 mouse_genomes_project 3 167245121 167248311 + Zzz3 protein_coding retained_intron MGP_CBAJ_T0063980.1 MGP_CBAJ_G0027668.1 mouse_genomes_project 3 167266498 167267900 + Zzz3 protein_coding processed_transcript MGP_CBAJ_T0007385.1 MGP_CBAJ_G0006044.1 mouse_genomes_project 3 28349954 28352457 - Gm32950 lincRNA lincRNA MGP_CBAJ_T0001080.1 MGP_CBAJ_G0001009.1 mouse_genomes_project 3 17188830 17192778 + TEC TEC MGP_CBAJ_T0061503.1 MGP_CBAJ_G0027128.1 mouse_genomes_project 3 96209021 96220801 + MGP_CBAJ_P0061503 Shc1 protein_coding protein_coding MGP_CBAJ_T0061504.1 MGP_CBAJ_G0027128.1 mouse_genomes_project 3 96209041 96218499 + MGP_CBAJ_P0061504 Shc1 protein_coding protein_coding MGP_CBAJ_T0061505.1 MGP_CBAJ_G0027128.1 mouse_genomes_project 3 96209064 96220957 + MGP_CBAJ_P0061505 Shc1 protein_coding protein_coding MGP_CBAJ_T0061506.1 MGP_CBAJ_G0027128.1 mouse_genomes_project 3 96209157 96222711 + MGP_CBAJ_P0061506 Shc1 protein_coding protein_coding MGP_CBAJ_T0061507.1 MGP_CBAJ_G0027128.1 mouse_genomes_project 3 96214887 96218298 + Shc1 protein_coding retained_intron MGP_CBAJ_T0061508.1 MGP_CBAJ_G0027128.1 mouse_genomes_project 3 96215882 96223365 + MGP_CBAJ_P0061508 Shc1 protein_coding protein_coding MGP_CBAJ_T0061509.1 MGP_CBAJ_G0027128.1 mouse_genomes_project 3 96215896 96220957 + MGP_CBAJ_P0061509 Shc1 protein_coding protein_coding MGP_CBAJ_T0061510.1 MGP_CBAJ_G0027128.1 mouse_genomes_project 3 96218780 96221613 + Shc1 protein_coding processed_transcript MGP_CBAJ_T0010417.1 MGP_CBAJ_G0008555.1 mouse_genomes_project 3 118698964 118699078 + Gm44384 miRNA miRNA MGP_CBAJ_T0059852.1 MGP_CBAJ_G0026800.1 mouse_genomes_project 3 26527253 26589300 + MGP_CBAJ_P0059852 Nceh1 protein_coding protein_coding MGP_CBAJ_T0059853.1 MGP_CBAJ_G0026800.1 mouse_genomes_project 3 26527292 26570666 + Nceh1 protein_coding retained_intron MGP_CBAJ_T0059854.1 MGP_CBAJ_G0026800.1 mouse_genomes_project 3 26527292 26636028 + MGP_CBAJ_P0059854 Nceh1 protein_coding protein_coding MGP_CBAJ_T0059855.1 MGP_CBAJ_G0026800.1 mouse_genomes_project 3 26527292 26567018 + MGP_CBAJ_P0059855 Nceh1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059856.1 MGP_CBAJ_G0026800.1 mouse_genomes_project 3 26532743 26583925 + Nceh1 protein_coding processed_transcript MGP_CBAJ_T0059615.1 MGP_CBAJ_G0026737.1 mouse_genomes_project 3 2178864 2390838 + MGP_CBAJ_P0059615 Zfhx4 protein_coding protein_coding MGP_CBAJ_T0059616.1 MGP_CBAJ_G0026737.1 mouse_genomes_project 3 2178884 2303101 + Zfhx4 protein_coding retained_intron MGP_CBAJ_T0059617.1 MGP_CBAJ_G0026737.1 mouse_genomes_project 3 2178892 2393527 + MGP_CBAJ_P0059617 Zfhx4 protein_coding protein_coding MGP_CBAJ_T0059618.1 MGP_CBAJ_G0026737.1 mouse_genomes_project 3 2181770 2202291 + MGP_CBAJ_P0059618 Zfhx4 protein_coding protein_coding MGP_CBAJ_T0059619.1 MGP_CBAJ_G0026737.1 mouse_genomes_project 3 2201944 2393529 + MGP_CBAJ_P0059619 Zfhx4 protein_coding protein_coding MGP_CBAJ_T0059729.1 MGP_CBAJ_G0026773.1 mouse_genomes_project 3 13751522 13850779 - MGP_CBAJ_P0059729 protein_coding protein_coding MGP_CBAJ_T0059733.1 MGP_CBAJ_G0026773.1 mouse_genomes_project 3 13798694 13850785 - MGP_CBAJ_P0059733 protein_coding protein_coding MGP_CBAJ_T0062532.1 MGP_CBAJ_G0027381.1 mouse_genomes_project 3 112901520 112940898 + MGP_CBAJ_P0062532 Phtf1 protein_coding protein_coding MGP_CBAJ_T0062533.1 MGP_CBAJ_G0027381.1 mouse_genomes_project 3 112901668 112940898 + MGP_CBAJ_P0062533 Phtf1 protein_coding protein_coding MGP_CBAJ_T0062534.1 MGP_CBAJ_G0027381.1 mouse_genomes_project 3 112901776 112957990 + MGP_CBAJ_P0062534 Phtf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062535.1 MGP_CBAJ_G0027381.1 mouse_genomes_project 3 112901778 112940900 + MGP_CBAJ_P0062535 Phtf1 protein_coding protein_coding MGP_CBAJ_T0062536.1 MGP_CBAJ_G0027381.1 mouse_genomes_project 3 112901782 112940898 + Phtf1 protein_coding retained_intron MGP_CBAJ_T0062537.1 MGP_CBAJ_G0027381.1 mouse_genomes_project 3 112901784 112924528 + MGP_CBAJ_P0062537 Phtf1 protein_coding protein_coding MGP_CBAJ_T0062538.1 MGP_CBAJ_G0027381.1 mouse_genomes_project 3 112901856 112940900 + MGP_CBAJ_P0062538 Phtf1 protein_coding protein_coding MGP_CBAJ_T0062539.1 MGP_CBAJ_G0027381.1 mouse_genomes_project 3 112901998 112920964 + MGP_CBAJ_P0062539 Phtf1 protein_coding protein_coding MGP_CBAJ_T0062540.1 MGP_CBAJ_G0027381.1 mouse_genomes_project 3 112902335 112930931 + MGP_CBAJ_P0062540 Phtf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062541.1 MGP_CBAJ_G0027381.1 mouse_genomes_project 3 112929829 112930975 + Phtf1 protein_coding retained_intron MGP_CBAJ_T0098495.1 MGP_CBAJ_G0036751.1 mouse_genomes_project 3 68568910 68830454 + sense_overlapping sense_overlapping MGP_CBAJ_T0007521.1 MGP_CBAJ_G0006144.1 mouse_genomes_project 3 102064043 102067568 - 1700040D17Rik lincRNA lincRNA MGP_CBAJ_T0001354.1 MGP_CBAJ_G0001280.1 mouse_genomes_project 3 172058819 172060493 + TEC TEC MGP_CBAJ_T0014169.1 MGP_CBAJ_G0012281.1 mouse_genomes_project 3 158373512 158374079 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001337.1 MGP_CBAJ_G0001263.1 mouse_genomes_project 3 165716451 165722455 - TEC TEC MGP_CBAJ_T0010378.1 MGP_CBAJ_G0008516.1 mouse_genomes_project 3 29067888 29067986 + Mir551b miRNA miRNA MGP_CBAJ_T0062202.1 MGP_CBAJ_G0027307.1 mouse_genomes_project 3 104817208 104841419 + MGP_CBAJ_P0062202 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062203.1 MGP_CBAJ_G0027307.1 mouse_genomes_project 3 104817292 104845840 + MGP_CBAJ_P0062203 protein_coding unknown_likely_coding MGP_CBAJ_T0062204.1 MGP_CBAJ_G0027307.1 mouse_genomes_project 3 104830424 104833557 + protein_coding processed_transcript MGP_CBAJ_T0062848.1 MGP_CBAJ_G0027460.1 mouse_genomes_project 3 118226650 118259639 + MGP_CBAJ_P0062848 Clcc1 protein_coding protein_coding MGP_CBAJ_T0062849.1 MGP_CBAJ_G0027460.1 mouse_genomes_project 3 118226686 118241166 + Clcc1 protein_coding processed_transcript MGP_CBAJ_T0062850.1 MGP_CBAJ_G0027460.1 mouse_genomes_project 3 118226694 118248939 + Clcc1 protein_coding processed_transcript MGP_CBAJ_T0062851.1 MGP_CBAJ_G0027460.1 mouse_genomes_project 3 118226695 118259635 + MGP_CBAJ_P0062851 Clcc1 protein_coding protein_coding MGP_CBAJ_T0062852.1 MGP_CBAJ_G0027460.1 mouse_genomes_project 3 118226695 118241715 + MGP_CBAJ_P0062852 Clcc1 protein_coding protein_coding MGP_CBAJ_T0062853.1 MGP_CBAJ_G0027460.1 mouse_genomes_project 3 118226727 118258811 + MGP_CBAJ_P0062853 Clcc1 protein_coding protein_coding MGP_CBAJ_T0062854.1 MGP_CBAJ_G0027460.1 mouse_genomes_project 3 118241358 118249665 + Clcc1 protein_coding processed_transcript MGP_CBAJ_T0062855.1 MGP_CBAJ_G0027460.1 mouse_genomes_project 3 118248712 118249671 + Clcc1 protein_coding retained_intron MGP_CBAJ_T0004285.1 MGP_CBAJ_G0003741.1 mouse_genomes_project 3 139300423 139301756 - Gm43729 antisense antisense MGP_CBAJ_T0061357.1 MGP_CBAJ_G0027104.1 mouse_genomes_project 3 95835203 95843573 - MGP_CBAJ_P0061357 Fdps protein_coding protein_coding MGP_CBAJ_T0061358.1 MGP_CBAJ_G0027104.1 mouse_genomes_project 3 95835203 95843502 - MGP_CBAJ_P0061358 Fdps protein_coding protein_coding MGP_CBAJ_T0061359.1 MGP_CBAJ_G0027104.1 mouse_genomes_project 3 95835364 95837295 - MGP_CBAJ_P0061359 Fdps protein_coding protein_coding MGP_CBAJ_T0061360.1 MGP_CBAJ_G0027104.1 mouse_genomes_project 3 95836671 95837599 - Fdps protein_coding retained_intron MGP_CBAJ_T0061361.1 MGP_CBAJ_G0027104.1 mouse_genomes_project 3 95836979 95842929 - MGP_CBAJ_P0061361 Fdps protein_coding protein_coding MGP_CBAJ_T0061362.1 MGP_CBAJ_G0027104.1 mouse_genomes_project 3 95837214 95843466 - MGP_CBAJ_P0061362 Fdps protein_coding protein_coding MGP_CBAJ_T0061363.1 MGP_CBAJ_G0027104.1 mouse_genomes_project 3 95840551 95843505 - Fdps protein_coding retained_intron MGP_CBAJ_T0001278.1 MGP_CBAJ_G0001205.1 mouse_genomes_project 3 136640780 136644948 - TEC TEC MGP_CBAJ_T0004231.1 MGP_CBAJ_G0003710.1 mouse_genomes_project 3 108569706 108575828 - Spag17os antisense antisense MGP_CBAJ_T0004232.1 MGP_CBAJ_G0003710.1 mouse_genomes_project 3 108571681 108575828 - Spag17os antisense antisense MGP_CBAJ_T0007541.1 MGP_CBAJ_G0006163.1 mouse_genomes_project 3 110974182 110974778 + Gm43241 lincRNA lincRNA MGP_CBAJ_T0014190.1 MGP_CBAJ_G0012302.1 mouse_genomes_project 3 171521682 171522148 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014028.1 MGP_CBAJ_G0012140.1 mouse_genomes_project 3 110770094 110770372 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001077.1 MGP_CBAJ_G0001006.1 mouse_genomes_project 3 8476547 8478233 - TEC TEC MGP_CBAJ_T0060180.1 MGP_CBAJ_G0026857.1 mouse_genomes_project 3 37524335 37569581 + MGP_CBAJ_P0060180 Adad1 protein_coding protein_coding MGP_CBAJ_T0060181.1 MGP_CBAJ_G0026857.1 mouse_genomes_project 3 37524439 37568580 + MGP_CBAJ_P0060181 Adad1 protein_coding protein_coding MGP_CBAJ_T0060182.1 MGP_CBAJ_G0026857.1 mouse_genomes_project 3 37524486 37528177 + Adad1 protein_coding retained_intron MGP_CBAJ_T0060183.1 MGP_CBAJ_G0026857.1 mouse_genomes_project 3 37545688 37574381 + Adad1 protein_coding retained_intron MGP_CBAJ_T0007376.1 MGP_CBAJ_G0006035.1 mouse_genomes_project 3 19066239 19067998 + Gm43525 lincRNA lincRNA MGP_CBAJ_T0001101.1 MGP_CBAJ_G0001030.1 mouse_genomes_project 3 33106976 33109414 - TEC TEC MGP_CBAJ_T0007413.1 MGP_CBAJ_G0006069.1 mouse_genomes_project 3 38754633 38759558 - 5430434I15Rik lincRNA lincRNA MGP_CBAJ_T0014033.1 MGP_CBAJ_G0012145.1 mouse_genomes_project 3 111593105 111593513 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001294.1 MGP_CBAJ_G0001221.1 mouse_genomes_project 3 138900275 138903475 - TEC TEC MGP_CBAJ_T0059768.1 MGP_CBAJ_G0026785.1 mouse_genomes_project 3 18265309 18284363 - MGP_CBAJ_P0059768 1700064H15Rik protein_coding protein_coding MGP_CBAJ_T0060956.1 MGP_CBAJ_G0027024.1 mouse_genomes_project 3 88874017 88880172 + MGP_CBAJ_P0060956 Fga protein_coding protein_coding MGP_CBAJ_T0060957.1 MGP_CBAJ_G0027024.1 mouse_genomes_project 3 88874156 88881534 + MGP_CBAJ_P0060957 Fga protein_coding protein_coding MGP_CBAJ_T0059948.1 MGP_CBAJ_G0026819.1 mouse_genomes_project 3 30553470 30583066 + MGP_CBAJ_P0059948 Sec62 protein_coding protein_coding MGP_CBAJ_T0059949.1 MGP_CBAJ_G0026819.1 mouse_genomes_project 3 30553931 30562207 + Sec62 protein_coding retained_intron MGP_CBAJ_T0059950.1 MGP_CBAJ_G0026819.1 mouse_genomes_project 3 30580653 30581835 + Sec62 protein_coding processed_transcript MGP_CBAJ_T0014056.1 MGP_CBAJ_G0012168.1 mouse_genomes_project 3 118169972 118170397 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014163.1 MGP_CBAJ_G0012275.1 mouse_genomes_project 3 155823734 155823828 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0063610.1 MGP_CBAJ_G0027604.1 mouse_genomes_project 3 151142959 151162156 + Adh1 protein_coding processed_transcript MGP_CBAJ_T0063611.1 MGP_CBAJ_G0027604.1 mouse_genomes_project 3 151157009 151170068 + MGP_CBAJ_P0063611 Adh1 protein_coding protein_coding MGP_CBAJ_T0063612.1 MGP_CBAJ_G0027604.1 mouse_genomes_project 3 151157160 151160320 + Adh1 protein_coding retained_intron MGP_CBAJ_T0063613.1 MGP_CBAJ_G0027604.1 mouse_genomes_project 3 151157166 151170068 + MGP_CBAJ_P0063613 Adh1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060690.1 MGP_CBAJ_G0026963.1 mouse_genomes_project 3 68996811 69009815 - MGP_CBAJ_P0060690 Ssr3 protein_coding protein_coding MGP_CBAJ_T0060691.1 MGP_CBAJ_G0026963.1 mouse_genomes_project 3 68998835 69000537 - Ssr3 protein_coding retained_intron MGP_CBAJ_T0060692.1 MGP_CBAJ_G0026963.1 mouse_genomes_project 3 68999185 69009745 - MGP_CBAJ_P0060692 Ssr3 protein_coding protein_coding MGP_CBAJ_T0063746.1 MGP_CBAJ_G0027631.1 mouse_genomes_project 3 158549842 158579207 - MGP_CBAJ_P0063746 Clca3b protein_coding protein_coding MGP_CBAJ_T0004150.1 MGP_CBAJ_G0003650.1 mouse_genomes_project 3 37699649 37700789 + Gm12534 antisense antisense MGP_CBAJ_T0007436.1 MGP_CBAJ_G0006083.1 mouse_genomes_project 3 53091886 53110580 - Gm29230 lincRNA lincRNA MGP_CBAJ_T0001256.1 MGP_CBAJ_G0001183.1 mouse_genomes_project 3 127454310 127458282 - TEC TEC MGP_CBAJ_T0013869.1 MGP_CBAJ_G0011981.1 mouse_genomes_project 3 60145314 60146361 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063380.1 MGP_CBAJ_G0027557.1 mouse_genomes_project 3 142729613 142747017 + MGP_CBAJ_P0063380 Etnppl protein_coding protein_coding MGP_CBAJ_T0063381.1 MGP_CBAJ_G0027557.1 mouse_genomes_project 3 142729734 142749729 + MGP_CBAJ_P0063381 Etnppl protein_coding protein_coding MGP_CBAJ_T0063382.1 MGP_CBAJ_G0027557.1 mouse_genomes_project 3 142729737 142733836 + Etnppl protein_coding retained_intron MGP_CBAJ_T0063383.1 MGP_CBAJ_G0027557.1 mouse_genomes_project 3 142729764 142733858 + Etnppl protein_coding retained_intron MGP_CBAJ_T0063384.1 MGP_CBAJ_G0027557.1 mouse_genomes_project 3 142729858 142746885 + MGP_CBAJ_P0063384 Etnppl protein_coding protein_coding MGP_CBAJ_T0063385.1 MGP_CBAJ_G0027557.1 mouse_genomes_project 3 142738727 142741932 + MGP_CBAJ_P0063385 Etnppl protein_coding protein_coding MGP_CBAJ_T0001169.1 MGP_CBAJ_G0001096.1 mouse_genomes_project 3 54471895 54473962 + TEC TEC MGP_CBAJ_T0060964.1 MGP_CBAJ_G0027027.1 mouse_genomes_project 3 88984390 89231250 + MGP_CBAJ_P0060964 Dchs2 protein_coding protein_coding MGP_CBAJ_T0013804.1 MGP_CBAJ_G0011916.1 mouse_genomes_project 3 37261255 37261862 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013904.1 MGP_CBAJ_G0012016.1 mouse_genomes_project 3 70267277 70268018 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004168.1 MGP_CBAJ_G0003665.1 mouse_genomes_project 3 61984948 61988630 - Gm43570 antisense antisense MGP_CBAJ_T0013816.1 MGP_CBAJ_G0011928.1 mouse_genomes_project 3 39168560 39169095 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004276.1 MGP_CBAJ_G0003734.1 mouse_genomes_project 3 133597741 133631507 - Gm42836 antisense antisense MGP_CBAJ_T0014112.1 MGP_CBAJ_G0012224.1 mouse_genomes_project 3 140855567 140856887 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098331.1 MGP_CBAJ_G0036597.1 mouse_genomes_project 3 108946163 108948860 + Gm42868 sense_intronic sense_intronic MGP_CBAJ_T0098336.1 MGP_CBAJ_G0036602.1 mouse_genomes_project 3 109633402 109637690 - Gm43465 sense_intronic sense_intronic MGP_CBAJ_T0060129.1 MGP_CBAJ_G0026850.1 mouse_genomes_project 3 36863642 36894896 - MGP_CBAJ_P0060129 Anxa5 protein_coding protein_coding MGP_CBAJ_T0060130.1 MGP_CBAJ_G0026850.1 mouse_genomes_project 3 36863883 36867054 - Anxa5 protein_coding retained_intron MGP_CBAJ_T0060131.1 MGP_CBAJ_G0026850.1 mouse_genomes_project 3 36866930 36894661 - MGP_CBAJ_P0060131 Anxa5 protein_coding protein_coding MGP_CBAJ_T0064102.1 MGP_CBAJ_G0027690.1 mouse_genomes_project 3 173429593 173458085 - MGP_CBAJ_P0064102 Srsf11 protein_coding protein_coding MGP_CBAJ_T0064103.1 MGP_CBAJ_G0027690.1 mouse_genomes_project 3 173429764 173444917 - Srsf11 protein_coding retained_intron MGP_CBAJ_T0064104.1 MGP_CBAJ_G0027690.1 mouse_genomes_project 3 173430039 173453211 - MGP_CBAJ_P0064104 Srsf11 protein_coding protein_coding MGP_CBAJ_T0064105.1 MGP_CBAJ_G0027690.1 mouse_genomes_project 3 173430623 173444635 - Srsf11 protein_coding retained_intron MGP_CBAJ_T0064106.1 MGP_CBAJ_G0027690.1 mouse_genomes_project 3 173430989 173457997 - MGP_CBAJ_P0064106 Srsf11 protein_coding protein_coding MGP_CBAJ_T0064107.1 MGP_CBAJ_G0027690.1 mouse_genomes_project 3 173431014 173431641 - Srsf11 protein_coding retained_intron MGP_CBAJ_T0064108.1 MGP_CBAJ_G0027690.1 mouse_genomes_project 3 173431463 173432268 - Srsf11 protein_coding retained_intron MGP_CBAJ_T0064109.1 MGP_CBAJ_G0027690.1 mouse_genomes_project 3 173431471 173443499 - MGP_CBAJ_P0064109 Srsf11 protein_coding protein_coding MGP_CBAJ_T0064110.1 MGP_CBAJ_G0027690.1 mouse_genomes_project 3 173433108 173445164 - Srsf11 protein_coding retained_intron MGP_CBAJ_T0064111.1 MGP_CBAJ_G0027690.1 mouse_genomes_project 3 173435440 173437233 - Srsf11 protein_coding retained_intron MGP_CBAJ_T0064112.1 MGP_CBAJ_G0027690.1 mouse_genomes_project 3 173438509 173458042 - MGP_CBAJ_P0064112 Srsf11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064113.1 MGP_CBAJ_G0027690.1 mouse_genomes_project 3 173438549 173458061 - MGP_CBAJ_P0064113 Srsf11 protein_coding protein_coding MGP_CBAJ_T0064114.1 MGP_CBAJ_G0027690.1 mouse_genomes_project 3 173443507 173452900 - MGP_CBAJ_P0064114 Srsf11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064115.1 MGP_CBAJ_G0027690.1 mouse_genomes_project 3 173444424 173453016 - MGP_CBAJ_P0064115 Srsf11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064116.1 MGP_CBAJ_G0027690.1 mouse_genomes_project 3 173444903 173458052 - Srsf11 protein_coding retained_intron MGP_CBAJ_T0064117.1 MGP_CBAJ_G0027690.1 mouse_genomes_project 3 173446229 173458057 - Srsf11 protein_coding retained_intron MGP_CBAJ_T0064118.1 MGP_CBAJ_G0027690.1 mouse_genomes_project 3 173448018 173453205 - Srsf11 protein_coding retained_intron MGP_CBAJ_T0064119.1 MGP_CBAJ_G0027690.1 mouse_genomes_project 3 173451651 173453199 - Srsf11 protein_coding retained_intron MGP_CBAJ_T0064120.1 MGP_CBAJ_G0027690.1 mouse_genomes_project 3 173452262 173458060 - Srsf11 protein_coding retained_intron MGP_CBAJ_T0014093.1 MGP_CBAJ_G0012205.1 mouse_genomes_project 3 132885670 132886076 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007677.1 MGP_CBAJ_G0006270.1 mouse_genomes_project 3 166723675 166731426 + lincRNA lincRNA MGP_CBAJ_T0062520.1 MGP_CBAJ_G0027379.1 mouse_genomes_project 3 112790901 112843640 + MGP_CBAJ_P0062520 Ptpn22 protein_coding unknown_likely_coding MGP_CBAJ_T0062521.1 MGP_CBAJ_G0027379.1 mouse_genomes_project 3 112791076 112843627 + MGP_CBAJ_P0062521 Ptpn22 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062522.1 MGP_CBAJ_G0027379.1 mouse_genomes_project 3 112791836 112808240 + Ptpn22 protein_coding processed_transcript MGP_CBAJ_T0062523.1 MGP_CBAJ_G0027379.1 mouse_genomes_project 3 112809543 112811426 + Ptpn22 protein_coding retained_intron MGP_CBAJ_T0062524.1 MGP_CBAJ_G0027379.1 mouse_genomes_project 3 112817760 112819934 + Ptpn22 protein_coding retained_intron MGP_CBAJ_T0062525.1 MGP_CBAJ_G0027379.1 mouse_genomes_project 3 112817850 112834769 + Ptpn22 protein_coding processed_transcript MGP_CBAJ_T0062526.1 MGP_CBAJ_G0027379.1 mouse_genomes_project 3 112820391 112840841 + Ptpn22 protein_coding retained_intron MGP_CBAJ_T0062527.1 MGP_CBAJ_G0027379.1 mouse_genomes_project 3 112833421 112843629 + Ptpn22 protein_coding retained_intron MGP_CBAJ_T0060659.1 MGP_CBAJ_G0026954.1 mouse_genomes_project 3 67130900 67214053 - MGP_CBAJ_P0060659 Plch1 protein_coding protein_coding MGP_CBAJ_T0060660.1 MGP_CBAJ_G0026954.1 mouse_genomes_project 3 67130904 67295448 - MGP_CBAJ_P0060660 Plch1 protein_coding protein_coding MGP_CBAJ_T0060661.1 MGP_CBAJ_G0026954.1 mouse_genomes_project 3 67130907 67137025 - Plch1 protein_coding retained_intron MGP_CBAJ_T0060662.1 MGP_CBAJ_G0026954.1 mouse_genomes_project 3 67130907 67177224 - Plch1 protein_coding retained_intron MGP_CBAJ_T0060663.1 MGP_CBAJ_G0026954.1 mouse_genomes_project 3 67130907 67295666 - MGP_CBAJ_P0060663 Plch1 protein_coding protein_coding MGP_CBAJ_T0060664.1 MGP_CBAJ_G0026954.1 mouse_genomes_project 3 67130907 67295400 - MGP_CBAJ_P0060664 Plch1 protein_coding protein_coding MGP_CBAJ_T0060665.1 MGP_CBAJ_G0026954.1 mouse_genomes_project 3 67130907 67295692 - MGP_CBAJ_P0060665 Plch1 protein_coding protein_coding MGP_CBAJ_T0060666.1 MGP_CBAJ_G0026954.1 mouse_genomes_project 3 67130908 67295400 - MGP_CBAJ_P0060666 Plch1 protein_coding protein_coding MGP_CBAJ_T0060667.1 MGP_CBAJ_G0026954.1 mouse_genomes_project 3 67131401 67347234 - MGP_CBAJ_P0060667 Plch1 protein_coding protein_coding MGP_CBAJ_T0060668.1 MGP_CBAJ_G0026954.1 mouse_genomes_project 3 67133603 67136714 - MGP_CBAJ_P0060668 Plch1 protein_coding protein_coding MGP_CBAJ_T0060669.1 MGP_CBAJ_G0026954.1 mouse_genomes_project 3 67136486 67295768 - MGP_CBAJ_P0060669 Plch1 protein_coding protein_coding MGP_CBAJ_T0060670.1 MGP_CBAJ_G0026954.1 mouse_genomes_project 3 67221770 67347204 - MGP_CBAJ_P0060670 Plch1 protein_coding protein_coding MGP_CBAJ_T0060671.1 MGP_CBAJ_G0026954.1 mouse_genomes_project 3 67314937 67347135 - MGP_CBAJ_P0060671 Plch1 protein_coding protein_coding MGP_CBAJ_T0100480.1 MGP_CBAJ_G0038735.1 mouse_genomes_project 3 117985984 117986108 + Gm22942 snoRNA snoRNA MGP_CBAJ_T0013746.1 MGP_CBAJ_G0011858.1 mouse_genomes_project 3 12631087 12632095 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004141.1 MGP_CBAJ_G0003646.1 mouse_genomes_project 3 36261141 36322105 + Gm15952 antisense antisense MGP_CBAJ_T0004142.1 MGP_CBAJ_G0003646.1 mouse_genomes_project 3 36261141 36270807 + Gm15952 antisense antisense MGP_CBAJ_T0004143.1 MGP_CBAJ_G0003646.1 mouse_genomes_project 3 36261153 36266138 + Gm15952 antisense antisense MGP_CBAJ_T0007487.1 MGP_CBAJ_G0006123.1 mouse_genomes_project 3 87508479 87511861 + A830029E22Rik lincRNA lincRNA MGP_CBAJ_T0007450.1 MGP_CBAJ_G0006095.1 mouse_genomes_project 3 57131380 57134573 + Gm26678 lincRNA lincRNA MGP_CBAJ_T0061007.1 MGP_CBAJ_G0027036.1 mouse_genomes_project 3 90497619 92068679 - MGP_CBAJ_P0061007 protein_coding protein_coding MGP_CBAJ_T0061029.1 MGP_CBAJ_G0027036.1 mouse_genomes_project 3 91971090 92068681 - protein_coding processed_transcript MGP_CBAJ_T0061030.1 MGP_CBAJ_G0027036.1 mouse_genomes_project 3 91987155 92068531 - protein_coding retained_intron MGP_CBAJ_T0010422.1 MGP_CBAJ_G0008560.1 mouse_genomes_project 3 133444954 133445073 - Mir760 miRNA miRNA MGP_CBAJ_T0059652.1 MGP_CBAJ_G0026747.1 mouse_genomes_project 3 6698255 6733784 + MGP_CBAJ_P0059652 Zbtb10 protein_coding protein_coding MGP_CBAJ_T0098328.1 MGP_CBAJ_G0036594.1 mouse_genomes_project 3 106627687 106632964 + sense_intronic sense_intronic MGP_CBAJ_T0014045.1 MGP_CBAJ_G0012157.1 mouse_genomes_project 3 115206973 115207441 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013895.1 MGP_CBAJ_G0012007.1 mouse_genomes_project 3 69013039 69014853 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013849.1 MGP_CBAJ_G0011961.1 mouse_genomes_project 3 52187804 52188036 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0063562.1 MGP_CBAJ_G0027591.1 mouse_genomes_project 3 150380709 150383287 - protein_coding lincRNA MGP_CBAJ_T0099194.1 MGP_CBAJ_G0037449.1 mouse_genomes_project 3 97492386 97492492 + Gm24593 snRNA snRNA MGP_CBAJ_T0101319.1 MGP_CBAJ_G0039419.1 mouse_genomes_project 3 139201742 139203512 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0063619.1 MGP_CBAJ_G0027607.1 mouse_genomes_project 3 151357786 151370125 + MGP_CBAJ_P0063619 Adh5 protein_coding protein_coding MGP_CBAJ_T0063620.1 MGP_CBAJ_G0027607.1 mouse_genomes_project 3 151357804 151360638 + Adh5 protein_coding retained_intron MGP_CBAJ_T0063621.1 MGP_CBAJ_G0027607.1 mouse_genomes_project 3 151357805 151361526 + Adh5 protein_coding retained_intron MGP_CBAJ_T0063622.1 MGP_CBAJ_G0027607.1 mouse_genomes_project 3 151357863 151360093 + Adh5 protein_coding retained_intron MGP_CBAJ_T0063623.1 MGP_CBAJ_G0027607.1 mouse_genomes_project 3 151357863 151362629 + MGP_CBAJ_P0063623 Adh5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063624.1 MGP_CBAJ_G0027607.1 mouse_genomes_project 3 151357874 151369429 + MGP_CBAJ_P0063624 Adh5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063625.1 MGP_CBAJ_G0027607.1 mouse_genomes_project 3 151369030 151369869 + Adh5 protein_coding retained_intron MGP_CBAJ_T0062369.1 MGP_CBAJ_G0027350.1 mouse_genomes_project 3 109851622 109865368 - MGP_CBAJ_P0062369 Cd2 protein_coding protein_coding MGP_CBAJ_T0062370.1 MGP_CBAJ_G0027350.1 mouse_genomes_project 3 109851631 109856105 - Cd2 protein_coding retained_intron MGP_CBAJ_T0062371.1 MGP_CBAJ_G0027350.1 mouse_genomes_project 3 109860485 109865308 - Cd2 protein_coding retained_intron MGP_CBAJ_T0060376.1 MGP_CBAJ_G0026891.1 mouse_genomes_project 3 53627877 53678281 - MGP_CBAJ_P0060376 Setd7 protein_coding protein_coding MGP_CBAJ_T0060377.1 MGP_CBAJ_G0026891.1 mouse_genomes_project 3 53645427 53652045 - Setd7 protein_coding retained_intron MGP_CBAJ_T0060378.1 MGP_CBAJ_G0026891.1 mouse_genomes_project 3 53650898 53652526 - Setd7 protein_coding retained_intron MGP_CBAJ_T0060379.1 MGP_CBAJ_G0026891.1 mouse_genomes_project 3 53666104 53668742 - Setd7 protein_coding retained_intron MGP_CBAJ_T0013834.1 MGP_CBAJ_G0011946.1 mouse_genomes_project 3 46981008 46981369 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001253.1 MGP_CBAJ_G0001180.1 mouse_genomes_project 3 126534342 126535365 + TEC TEC MGP_CBAJ_T0001182.1 MGP_CBAJ_G0001109.1 mouse_genomes_project 3 58764293 58767297 - TEC TEC MGP_CBAJ_T0014077.1 MGP_CBAJ_G0012189.1 mouse_genomes_project 3 125844221 125846382 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101838.1 MGP_CBAJ_G0039869.1 mouse_genomes_project 3 12454317 12480949 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0001228.1 MGP_CBAJ_G0001155.1 mouse_genomes_project 3 103601751 103603484 + TEC TEC MGP_CBAJ_T0014159.1 MGP_CBAJ_G0012271.1 mouse_genomes_project 3 154089055 154089599 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098034.1 MGP_CBAJ_G0036307.1 mouse_genomes_project 3 53976805 53976922 + n-R5s196 rRNA rRNA MGP_CBAJ_T0101870.1 MGP_CBAJ_G0039901.1 mouse_genomes_project 3 115634293 115635395 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099165.1 MGP_CBAJ_G0037420.1 mouse_genomes_project 3 58161120 58161227 + Gm25404 snRNA snRNA MGP_CBAJ_T0007575.1 MGP_CBAJ_G0006191.1 mouse_genomes_project 3 131564046 131835656 - lincRNA lincRNA MGP_CBAJ_T0007576.1 MGP_CBAJ_G0006191.1 mouse_genomes_project 3 131660818 131835655 - lincRNA lincRNA MGP_CBAJ_T0007577.1 MGP_CBAJ_G0006191.1 mouse_genomes_project 3 131664572 131835637 - lincRNA lincRNA MGP_CBAJ_T0007578.1 MGP_CBAJ_G0006191.1 mouse_genomes_project 3 131734556 131835614 - lincRNA lincRNA MGP_CBAJ_T0059816.1 MGP_CBAJ_G0026795.1 mouse_genomes_project 3 20999066 21157839 + MGP_CBAJ_P0059816 Tbl1xr1 protein_coding protein_coding MGP_CBAJ_T0059817.1 MGP_CBAJ_G0026795.1 mouse_genomes_project 3 20999141 21153996 + MGP_CBAJ_P0059817 Tbl1xr1 protein_coding protein_coding MGP_CBAJ_T0059818.1 MGP_CBAJ_G0026795.1 mouse_genomes_project 3 20999170 21129720 + Tbl1xr1 protein_coding processed_transcript MGP_CBAJ_T0059819.1 MGP_CBAJ_G0026795.1 mouse_genomes_project 3 20999246 21132168 + MGP_CBAJ_P0059819 Tbl1xr1 protein_coding protein_coding MGP_CBAJ_T0059820.1 MGP_CBAJ_G0026795.1 mouse_genomes_project 3 20999295 21131007 + Tbl1xr1 protein_coding processed_transcript MGP_CBAJ_T0059821.1 MGP_CBAJ_G0026795.1 mouse_genomes_project 3 20999350 21129688 + MGP_CBAJ_P0059821 Tbl1xr1 protein_coding protein_coding MGP_CBAJ_T0059822.1 MGP_CBAJ_G0026795.1 mouse_genomes_project 3 20999698 21156538 + MGP_CBAJ_P0059822 Tbl1xr1 protein_coding protein_coding MGP_CBAJ_T0059823.1 MGP_CBAJ_G0026795.1 mouse_genomes_project 3 21045662 21153213 + MGP_CBAJ_P0059823 Tbl1xr1 protein_coding protein_coding MGP_CBAJ_T0059824.1 MGP_CBAJ_G0026795.1 mouse_genomes_project 3 21075931 21131000 + MGP_CBAJ_P0059824 Tbl1xr1 protein_coding protein_coding MGP_CBAJ_T0059825.1 MGP_CBAJ_G0026795.1 mouse_genomes_project 3 21085592 21154320 + MGP_CBAJ_P0059825 Tbl1xr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059826.1 MGP_CBAJ_G0026795.1 mouse_genomes_project 3 21144436 21151824 + MGP_CBAJ_P0059826 Tbl1xr1 protein_coding protein_coding MGP_CBAJ_T0001336.1 MGP_CBAJ_G0001262.1 mouse_genomes_project 3 165687188 165691615 - TEC TEC MGP_CBAJ_T0061185.1 MGP_CBAJ_G0027078.1 mouse_genomes_project 3 94806837 94831788 - MGP_CBAJ_P0061185 Tsacc protein_coding protein_coding MGP_CBAJ_T0061186.1 MGP_CBAJ_G0027078.1 mouse_genomes_project 3 94806840 94831627 - MGP_CBAJ_P0061186 Tsacc protein_coding protein_coding MGP_CBAJ_T0001313.1 MGP_CBAJ_G0001239.1 mouse_genomes_project 3 143163312 143165844 - TEC TEC MGP_CBAJ_T0014050.1 MGP_CBAJ_G0012162.1 mouse_genomes_project 3 117385255 117385403 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007670.1 MGP_CBAJ_G0006266.1 mouse_genomes_project 3 165663933 165667824 + Gm43468 lincRNA lincRNA MGP_CBAJ_T0004292.1 MGP_CBAJ_G0003747.1 mouse_genomes_project 3 143488803 143505922 + 4930534D22Rik antisense antisense MGP_CBAJ_T0017747.1 MGP_CBAJ_G0015266.1 mouse_genomes_project 3 133962192 134006288 - 4930447N08Rik processed_transcript antisense MGP_CBAJ_T0017748.1 MGP_CBAJ_G0015266.1 mouse_genomes_project 3 133969777 134006387 - 4930447N08Rik processed_transcript retained_intron MGP_CBAJ_T0017749.1 MGP_CBAJ_G0015266.1 mouse_genomes_project 3 133999421 134006233 - 4930447N08Rik processed_transcript processed_transcript MGP_CBAJ_T0017750.1 MGP_CBAJ_G0015266.1 mouse_genomes_project 3 133999428 134006320 - 4930447N08Rik processed_transcript antisense MGP_CBAJ_T0063805.1 MGP_CBAJ_G0027644.1 mouse_genomes_project 3 160138296 160198901 + MGP_CBAJ_P0063805 Mcoln2 protein_coding protein_coding MGP_CBAJ_T0063806.1 MGP_CBAJ_G0027644.1 mouse_genomes_project 3 160138442 160173193 + Mcoln2 protein_coding retained_intron MGP_CBAJ_T0063807.1 MGP_CBAJ_G0027644.1 mouse_genomes_project 3 160138637 160198900 + MGP_CBAJ_P0063807 Mcoln2 protein_coding protein_coding MGP_CBAJ_T0063808.1 MGP_CBAJ_G0027644.1 mouse_genomes_project 3 160191113 160195874 + MGP_CBAJ_P0063808 Mcoln2 protein_coding protein_coding MGP_CBAJ_T0063809.1 MGP_CBAJ_G0027644.1 mouse_genomes_project 3 160195470 160198528 + Mcoln2 protein_coding retained_intron MGP_CBAJ_T0101110.1 MGP_CBAJ_G0039308.1 mouse_genomes_project 3 133992421 133992715 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0062014.1 MGP_CBAJ_G0027264.1 mouse_genomes_project 3 103228622 103262269 - Setdb1 protein_coding retained_intron MGP_CBAJ_T0062015.1 MGP_CBAJ_G0027264.1 mouse_genomes_project 3 103228622 103262270 - MGP_CBAJ_P0062015 Setdb1 protein_coding protein_coding MGP_CBAJ_T0062016.1 MGP_CBAJ_G0027264.1 mouse_genomes_project 3 103228622 103263347 - MGP_CBAJ_P0062016 Setdb1 protein_coding protein_coding MGP_CBAJ_T0062017.1 MGP_CBAJ_G0027264.1 mouse_genomes_project 3 103228622 103263345 - MGP_CBAJ_P0062017 Setdb1 protein_coding protein_coding MGP_CBAJ_T0062018.1 MGP_CBAJ_G0027264.1 mouse_genomes_project 3 103244202 103262270 - Setdb1 protein_coding retained_intron MGP_CBAJ_T0062019.1 MGP_CBAJ_G0027264.1 mouse_genomes_project 3 103260700 103262203 - Setdb1 protein_coding retained_intron MGP_CBAJ_T0098321.1 MGP_CBAJ_G0036588.1 mouse_genomes_project 3 91708250 91728502 - Gm15535 sense_intronic sense_intronic MGP_CBAJ_T0098322.1 MGP_CBAJ_G0036588.1 mouse_genomes_project 3 91712703 91728408 - Gm15535 sense_intronic sense_intronic MGP_CBAJ_T0062205.1 MGP_CBAJ_G0027308.1 mouse_genomes_project 3 104854426 104866073 + MGP_CBAJ_P0062205 Pias3 protein_coding protein_coding MGP_CBAJ_T0062206.1 MGP_CBAJ_G0027308.1 mouse_genomes_project 3 104854484 104865585 + MGP_CBAJ_P0062206 Pias3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062207.1 MGP_CBAJ_G0027308.1 mouse_genomes_project 3 104855117 104857717 + MGP_CBAJ_P0062207 Pias3 protein_coding protein_coding MGP_CBAJ_T0062208.1 MGP_CBAJ_G0027308.1 mouse_genomes_project 3 104855124 104866181 + MGP_CBAJ_P0062208 Pias3 protein_coding protein_coding MGP_CBAJ_T0062209.1 MGP_CBAJ_G0027308.1 mouse_genomes_project 3 104855158 104866084 + MGP_CBAJ_P0062209 Pias3 protein_coding protein_coding MGP_CBAJ_T0062210.1 MGP_CBAJ_G0027308.1 mouse_genomes_project 3 104855174 104858008 + Pias3 protein_coding retained_intron MGP_CBAJ_T0062211.1 MGP_CBAJ_G0027308.1 mouse_genomes_project 3 104855235 104859718 + MGP_CBAJ_P0062211 Pias3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062212.1 MGP_CBAJ_G0027308.1 mouse_genomes_project 3 104858503 104863931 + Pias3 protein_coding retained_intron MGP_CBAJ_T0062213.1 MGP_CBAJ_G0027308.1 mouse_genomes_project 3 104859379 104863996 + Pias3 protein_coding retained_intron MGP_CBAJ_T0062214.1 MGP_CBAJ_G0027308.1 mouse_genomes_project 3 104864275 104865244 + MGP_CBAJ_P0062214 Pias3 protein_coding protein_coding MGP_CBAJ_T0060988.1 MGP_CBAJ_G0027033.1 mouse_genomes_project 3 90142714 90143743 + MGP_CBAJ_P0060988 Gm6525 protein_coding protein_coding MGP_CBAJ_T0014162.1 MGP_CBAJ_G0012274.1 mouse_genomes_project 3 155823732 155823870 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001150.1 MGP_CBAJ_G0001079.1 mouse_genomes_project 3 53589076 53591583 - TEC TEC MGP_CBAJ_T0004152.1 MGP_CBAJ_G0003652.1 mouse_genomes_project 3 39504718 39518329 - C230034O21Rik antisense antisense MGP_CBAJ_T0060072.1 MGP_CBAJ_G0026840.1 mouse_genomes_project 3 34113718 34166691 + MGP_CBAJ_P0060072 Fxr1 protein_coding protein_coding MGP_CBAJ_T0060073.1 MGP_CBAJ_G0026840.1 mouse_genomes_project 3 34113873 34166720 + MGP_CBAJ_P0060073 Fxr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060074.1 MGP_CBAJ_G0026840.1 mouse_genomes_project 3 34113880 34166694 + MGP_CBAJ_P0060074 Fxr1 protein_coding protein_coding MGP_CBAJ_T0060075.1 MGP_CBAJ_G0026840.1 mouse_genomes_project 3 34113883 34166694 + MGP_CBAJ_P0060075 Fxr1 protein_coding protein_coding MGP_CBAJ_T0060076.1 MGP_CBAJ_G0026840.1 mouse_genomes_project 3 34113883 34167671 + MGP_CBAJ_P0060076 Fxr1 protein_coding protein_coding MGP_CBAJ_T0060077.1 MGP_CBAJ_G0026840.1 mouse_genomes_project 3 34113888 34161676 + MGP_CBAJ_P0060077 Fxr1 protein_coding protein_coding MGP_CBAJ_T0060078.1 MGP_CBAJ_G0026840.1 mouse_genomes_project 3 34136881 34139015 + Fxr1 protein_coding retained_intron MGP_CBAJ_T0060079.1 MGP_CBAJ_G0026840.1 mouse_genomes_project 3 34136884 34143882 + MGP_CBAJ_P0060079 Fxr1 protein_coding protein_coding MGP_CBAJ_T0060080.1 MGP_CBAJ_G0026840.1 mouse_genomes_project 3 34143976 34146464 + Fxr1 protein_coding retained_intron MGP_CBAJ_T0062713.1 MGP_CBAJ_G0027429.1 mouse_genomes_project 3 117031046 117032596 - Strip1 protein_coding retained_intron MGP_CBAJ_T0062714.1 MGP_CBAJ_G0027429.1 mouse_genomes_project 3 117031046 117050209 - MGP_CBAJ_P0062714 Strip1 protein_coding protein_coding MGP_CBAJ_T0062715.1 MGP_CBAJ_G0027429.1 mouse_genomes_project 3 117031049 117045359 - Strip1 protein_coding processed_transcript MGP_CBAJ_T0062716.1 MGP_CBAJ_G0027429.1 mouse_genomes_project 3 117035408 117038590 - Strip1 protein_coding processed_transcript MGP_CBAJ_T0062717.1 MGP_CBAJ_G0027429.1 mouse_genomes_project 3 117038966 117050209 - Strip1 protein_coding retained_intron MGP_CBAJ_T0060451.1 MGP_CBAJ_G0026905.1 mouse_genomes_project 3 57219715 57220892 - MGP_CBAJ_P0060451 Gm21958 protein_coding protein_coding MGP_CBAJ_T0004124.1 MGP_CBAJ_G0003634.1 mouse_genomes_project 3 17854845 17867986 + Gm16093 antisense antisense MGP_CBAJ_T0010376.1 MGP_CBAJ_G0008514.1 mouse_genomes_project 3 26980594 26980690 - Mir3092 miRNA miRNA MGP_CBAJ_T0059912.1 MGP_CBAJ_G0026812.1 mouse_genomes_project 3 29634933 29704940 - MGP_CBAJ_P0059912 Mecom protein_coding protein_coding MGP_CBAJ_T0059913.1 MGP_CBAJ_G0026812.1 mouse_genomes_project 3 29634936 30226901 - MGP_CBAJ_P0059913 Mecom protein_coding protein_coding MGP_CBAJ_T0059914.1 MGP_CBAJ_G0026812.1 mouse_genomes_project 3 29634943 29705289 - MGP_CBAJ_P0059914 Mecom protein_coding protein_coding MGP_CBAJ_T0059915.1 MGP_CBAJ_G0026812.1 mouse_genomes_project 3 29634944 29833396 - MGP_CBAJ_P0059915 Mecom protein_coding protein_coding MGP_CBAJ_T0059916.1 MGP_CBAJ_G0026812.1 mouse_genomes_project 3 29636204 29937142 - MGP_CBAJ_P0059916 Mecom protein_coding protein_coding MGP_CBAJ_T0059917.1 MGP_CBAJ_G0026812.1 mouse_genomes_project 3 29636353 29688486 - MGP_CBAJ_P0059917 Mecom protein_coding protein_coding MGP_CBAJ_T0059918.1 MGP_CBAJ_G0026812.1 mouse_genomes_project 3 29636419 29688525 - MGP_CBAJ_P0059918 Mecom protein_coding protein_coding MGP_CBAJ_T0059919.1 MGP_CBAJ_G0026812.1 mouse_genomes_project 3 29646723 30226676 - MGP_CBAJ_P0059919 Mecom protein_coding protein_coding MGP_CBAJ_T0059920.1 MGP_CBAJ_G0026812.1 mouse_genomes_project 3 29649078 30226990 - MGP_CBAJ_P0059920 Mecom protein_coding protein_coding MGP_CBAJ_T0059921.1 MGP_CBAJ_G0026812.1 mouse_genomes_project 3 29661000 30270696 - MGP_CBAJ_P0059921 Mecom protein_coding nonsense_mediated_decay MGP_CBAJ_T0059922.1 MGP_CBAJ_G0026812.1 mouse_genomes_project 3 29667611 29704845 - Mecom protein_coding processed_transcript MGP_CBAJ_T0059923.1 MGP_CBAJ_G0026812.1 mouse_genomes_project 3 29667611 29704988 - Mecom protein_coding retained_intron MGP_CBAJ_T0059924.1 MGP_CBAJ_G0026812.1 mouse_genomes_project 3 29688551 29703222 - MGP_CBAJ_P0059924 Mecom protein_coding protein_coding MGP_CBAJ_T0059925.1 MGP_CBAJ_G0026812.1 mouse_genomes_project 3 29706737 30226901 - Mecom protein_coding processed_transcript MGP_CBAJ_T0059926.1 MGP_CBAJ_G0026812.1 mouse_genomes_project 3 29934416 29936940 - Mecom protein_coding retained_intron MGP_CBAJ_T0059927.1 MGP_CBAJ_G0026812.1 mouse_genomes_project 3 29935542 30226649 - Mecom protein_coding processed_transcript MGP_CBAJ_T0059928.1 MGP_CBAJ_G0026812.1 mouse_genomes_project 3 29936951 29937299 - MGP_CBAJ_P0059928 Mecom protein_coding protein_coding MGP_CBAJ_T0004206.1 MGP_CBAJ_G0003694.1 mouse_genomes_project 3 102023514 102031762 - Gm43306 antisense antisense MGP_CBAJ_T0063017.1 MGP_CBAJ_G0027494.1 mouse_genomes_project 3 127208631 127279252 - MGP_CBAJ_P0063017 Agl protein_coding protein_coding MGP_CBAJ_T0063018.1 MGP_CBAJ_G0027494.1 mouse_genomes_project 3 127211140 127278508 - MGP_CBAJ_P0063018 Agl protein_coding protein_coding MGP_CBAJ_T0063019.1 MGP_CBAJ_G0027494.1 mouse_genomes_project 3 127211684 127250747 - MGP_CBAJ_P0063019 Agl protein_coding protein_coding MGP_CBAJ_T0063020.1 MGP_CBAJ_G0027494.1 mouse_genomes_project 3 127216692 127279128 - MGP_CBAJ_P0063020 Agl protein_coding nonsense_mediated_decay MGP_CBAJ_T0063021.1 MGP_CBAJ_G0027494.1 mouse_genomes_project 3 127225813 127279215 - MGP_CBAJ_P0063021 Agl protein_coding protein_coding MGP_CBAJ_T0063022.1 MGP_CBAJ_G0027494.1 mouse_genomes_project 3 127249509 127251247 - MGP_CBAJ_P0063022 Agl protein_coding protein_coding MGP_CBAJ_T0063023.1 MGP_CBAJ_G0027494.1 mouse_genomes_project 3 127260124 127279117 - Agl protein_coding retained_intron MGP_CBAJ_T0063024.1 MGP_CBAJ_G0027494.1 mouse_genomes_project 3 127261460 127278937 - MGP_CBAJ_P0063024 Agl protein_coding protein_coding MGP_CBAJ_T0061122.1 MGP_CBAJ_G0027063.1 mouse_genomes_project 3 94369094 94378605 + MGP_CBAJ_P0061122 Hdgf protein_coding protein_coding MGP_CBAJ_T0061123.1 MGP_CBAJ_G0027063.1 mouse_genomes_project 3 94369521 94377121 + MGP_CBAJ_P0061123 Hdgf protein_coding nonsense_mediated_decay MGP_CBAJ_T0061124.1 MGP_CBAJ_G0027063.1 mouse_genomes_project 3 94370003 94376638 + Hdgf protein_coding processed_transcript MGP_CBAJ_T0061125.1 MGP_CBAJ_G0027063.1 mouse_genomes_project 3 94372504 94376654 + Hdgf protein_coding processed_transcript MGP_CBAJ_T0061126.1 MGP_CBAJ_G0027063.1 mouse_genomes_project 3 94376432 94377249 + Hdgf protein_coding retained_intron MGP_CBAJ_T0001259.1 MGP_CBAJ_G0001186.1 mouse_genomes_project 3 129246871 129250382 + TEC TEC MGP_CBAJ_T0013712.1 MGP_CBAJ_G0011824.1 mouse_genomes_project 3 3529890 3530872 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0063039.1 MGP_CBAJ_G0027499.1 mouse_genomes_project 3 128185623 128315678 + MGP_CBAJ_P0063039 Plppr5 protein_coding protein_coding MGP_CBAJ_T0063040.1 MGP_CBAJ_G0027499.1 mouse_genomes_project 3 128186014 128315678 + MGP_CBAJ_P0063040 Plppr5 protein_coding protein_coding MGP_CBAJ_T0098334.1 MGP_CBAJ_G0036600.1 mouse_genomes_project 3 109093453 109096841 - Gm43462 sense_intronic sense_intronic MGP_CBAJ_T0013931.1 MGP_CBAJ_G0012043.1 mouse_genomes_project 3 77125295 77125809 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060567.1 MGP_CBAJ_G0026930.1 mouse_genomes_project 3 61552560 61583847 - MGP_CBAJ_P0060567 Erich6 protein_coding protein_coding MGP_CBAJ_T0060568.1 MGP_CBAJ_G0026930.1 mouse_genomes_project 3 61552570 61577391 - MGP_CBAJ_P0060568 Erich6 protein_coding unknown_likely_coding MGP_CBAJ_T0099167.1 MGP_CBAJ_G0037422.1 mouse_genomes_project 3 61181604 61181711 - Gm26166 snRNA snRNA MGP_CBAJ_T0062273.1 MGP_CBAJ_G0027322.1 mouse_genomes_project 3 105924074 105936683 + MGP_CBAJ_P0062273 Prkab2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062274.1 MGP_CBAJ_G0027322.1 mouse_genomes_project 3 105924093 105939696 + MGP_CBAJ_P0062274 Prkab2 protein_coding protein_coding MGP_CBAJ_T0062275.1 MGP_CBAJ_G0027322.1 mouse_genomes_project 3 105924095 105936817 + MGP_CBAJ_P0062275 Prkab2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062276.1 MGP_CBAJ_G0027322.1 mouse_genomes_project 3 105932413 105938989 + Prkab2 protein_coding retained_intron MGP_CBAJ_T0062277.1 MGP_CBAJ_G0027322.1 mouse_genomes_project 3 105933223 105938965 + Prkab2 protein_coding retained_intron MGP_CBAJ_T0062278.1 MGP_CBAJ_G0027322.1 mouse_genomes_project 3 105936081 105936932 + Prkab2 protein_coding processed_transcript MGP_CBAJ_T0007687.1 MGP_CBAJ_G0006276.1 mouse_genomes_project 3 173092708 173098583 - Gm33466 lincRNA lincRNA MGP_CBAJ_T0063594.1 MGP_CBAJ_G0027600.1 mouse_genomes_project 3 150962413 151004979 - MGP_CBAJ_P0063594 Mttp protein_coding protein_coding MGP_CBAJ_T0063595.1 MGP_CBAJ_G0027600.1 mouse_genomes_project 3 150962428 151018731 - MGP_CBAJ_P0063595 Mttp protein_coding unknown_likely_coding MGP_CBAJ_T0063596.1 MGP_CBAJ_G0027600.1 mouse_genomes_project 3 150963613 151018681 - MGP_CBAJ_P0063596 Mttp protein_coding protein_coding MGP_CBAJ_T0063597.1 MGP_CBAJ_G0027600.1 mouse_genomes_project 3 151017555 151020257 - Mttp protein_coding retained_intron MGP_CBAJ_T0001188.1 MGP_CBAJ_G0001115.1 mouse_genomes_project 3 61447138 61448333 + TEC TEC MGP_CBAJ_T0063995.1 MGP_CBAJ_G0027672.1 mouse_genomes_project 3 168090392 168679769 - MGP_CBAJ_P0063995 St6galnac3 protein_coding protein_coding MGP_CBAJ_T0063996.1 MGP_CBAJ_G0027672.1 mouse_genomes_project 3 168097491 168122709 - MGP_CBAJ_P0063996 St6galnac3 protein_coding protein_coding MGP_CBAJ_T0063997.1 MGP_CBAJ_G0027672.1 mouse_genomes_project 3 168098742 168679708 - MGP_CBAJ_P0063997 St6galnac3 protein_coding protein_coding MGP_CBAJ_T0063998.1 MGP_CBAJ_G0027672.1 mouse_genomes_project 3 168425180 168426046 - St6galnac3 protein_coding retained_intron MGP_CBAJ_T0063999.1 MGP_CBAJ_G0027672.1 mouse_genomes_project 3 168425435 168675591 - St6galnac3 protein_coding retained_intron MGP_CBAJ_T0010395.1 MGP_CBAJ_G0008533.1 mouse_genomes_project 3 87851955 87852018 - Mir7010 miRNA miRNA MGP_CBAJ_T0004125.1 MGP_CBAJ_G0003635.1 mouse_genomes_project 3 25592535 25593765 + A830092H15Rik antisense antisense MGP_CBAJ_T0004126.1 MGP_CBAJ_G0003635.1 mouse_genomes_project 3 25593337 25594768 + A830092H15Rik antisense antisense MGP_CBAJ_T0013983.1 MGP_CBAJ_G0012095.1 mouse_genomes_project 3 99760554 99760858 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001180.1 MGP_CBAJ_G0001107.1 mouse_genomes_project 3 58192010 58194363 + TEC TEC MGP_CBAJ_T0059837.1 MGP_CBAJ_G0026798.1 mouse_genomes_project 3 25915396 26293822 + MGP_CBAJ_P0059837 Spata16 protein_coding protein_coding MGP_CBAJ_T0059838.1 MGP_CBAJ_G0026798.1 mouse_genomes_project 3 25917642 26238117 + MGP_CBAJ_P0059838 Spata16 protein_coding protein_coding MGP_CBAJ_T0098324.1 MGP_CBAJ_G0036590.1 mouse_genomes_project 3 102068049 102073041 + Gm42463 sense_intronic sense_intronic MGP_CBAJ_T0061041.1 MGP_CBAJ_G0027046.1 mouse_genomes_project 3 92441447 93073566 + MGP_CBAJ_P0061041 Lrba protein_coding protein_coding MGP_CBAJ_T0061042.1 MGP_CBAJ_G0027046.1 mouse_genomes_project 3 92441447 93036457 + MGP_CBAJ_P0061042 Lrba protein_coding protein_coding MGP_CBAJ_T0061043.1 MGP_CBAJ_G0027046.1 mouse_genomes_project 3 92441447 93067840 + MGP_CBAJ_P0061043 Lrba protein_coding protein_coding MGP_CBAJ_T0061044.1 MGP_CBAJ_G0027046.1 mouse_genomes_project 3 92598779 92600187 + Lrba protein_coding retained_intron MGP_CBAJ_T0061045.1 MGP_CBAJ_G0027046.1 mouse_genomes_project 3 92802269 92880411 + Lrba protein_coding retained_intron MGP_CBAJ_T0061048.1 MGP_CBAJ_G0027046.1 mouse_genomes_project 3 92809006 92894120 + Lrba protein_coding retained_intron MGP_CBAJ_T0061049.1 MGP_CBAJ_G0027046.1 mouse_genomes_project 3 92810468 93073570 + MGP_CBAJ_P0061049 Lrba protein_coding protein_coding MGP_CBAJ_T0001312.1 MGP_CBAJ_G0001238.1 mouse_genomes_project 3 143030033 143031412 + TEC TEC MGP_CBAJ_T0099175.1 MGP_CBAJ_G0037430.1 mouse_genomes_project 3 69778100 69778253 - Gm26442 snRNA snRNA MGP_CBAJ_T0013779.1 MGP_CBAJ_G0011891.1 mouse_genomes_project 3 26331520 26331631 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013726.1 MGP_CBAJ_G0011838.1 mouse_genomes_project 3 7471176 7474125 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0060308.1 MGP_CBAJ_G0026880.1 mouse_genomes_project 3 42561772 42578060 + MGP_CBAJ_P0060308 D3Ertd751e protein_coding protein_coding MGP_CBAJ_T0060309.1 MGP_CBAJ_G0026880.1 mouse_genomes_project 3 42561817 42575451 + MGP_CBAJ_P0060309 D3Ertd751e protein_coding protein_coding MGP_CBAJ_T0060310.1 MGP_CBAJ_G0026880.1 mouse_genomes_project 3 42561820 42578050 + MGP_CBAJ_P0060310 D3Ertd751e protein_coding protein_coding MGP_CBAJ_T0060311.1 MGP_CBAJ_G0026880.1 mouse_genomes_project 3 42561823 42578509 + MGP_CBAJ_P0060311 D3Ertd751e protein_coding nonsense_mediated_decay MGP_CBAJ_T0060312.1 MGP_CBAJ_G0026880.1 mouse_genomes_project 3 42561824 42578059 + MGP_CBAJ_P0060312 D3Ertd751e protein_coding protein_coding MGP_CBAJ_T0060313.1 MGP_CBAJ_G0026880.1 mouse_genomes_project 3 42561824 42578059 + MGP_CBAJ_P0060313 D3Ertd751e protein_coding protein_coding MGP_CBAJ_T0060314.1 MGP_CBAJ_G0026880.1 mouse_genomes_project 3 42561860 42578059 + MGP_CBAJ_P0060314 D3Ertd751e protein_coding protein_coding MGP_CBAJ_T0060315.1 MGP_CBAJ_G0026880.1 mouse_genomes_project 3 42561862 42563127 + D3Ertd751e protein_coding retained_intron MGP_CBAJ_T0060316.1 MGP_CBAJ_G0026880.1 mouse_genomes_project 3 42561869 42576780 + MGP_CBAJ_P0060316 D3Ertd751e protein_coding protein_coding MGP_CBAJ_T0060317.1 MGP_CBAJ_G0026880.1 mouse_genomes_project 3 42561932 42572904 + MGP_CBAJ_P0060317 D3Ertd751e protein_coding protein_coding MGP_CBAJ_T0060318.1 MGP_CBAJ_G0026880.1 mouse_genomes_project 3 42563876 42575275 + MGP_CBAJ_P0060318 D3Ertd751e protein_coding protein_coding MGP_CBAJ_T0060319.1 MGP_CBAJ_G0026880.1 mouse_genomes_project 3 42565679 42575291 + MGP_CBAJ_P0060319 D3Ertd751e protein_coding protein_coding MGP_CBAJ_T0060320.1 MGP_CBAJ_G0026880.1 mouse_genomes_project 3 42565909 42578077 + MGP_CBAJ_P0060320 D3Ertd751e protein_coding nonsense_mediated_decay MGP_CBAJ_T0060321.1 MGP_CBAJ_G0026880.1 mouse_genomes_project 3 42567777 42575626 + D3Ertd751e protein_coding retained_intron MGP_CBAJ_T0014078.1 MGP_CBAJ_G0012190.1 mouse_genomes_project 3 126305008 126306173 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0062348.1 MGP_CBAJ_G0027344.1 mouse_genomes_project 3 109016749 109156197 - MGP_CBAJ_P0062348 Man1a2 protein_coding protein_coding MGP_CBAJ_T0062349.1 MGP_CBAJ_G0027344.1 mouse_genomes_project 3 109047042 109119414 - Man1a2 protein_coding processed_transcript MGP_CBAJ_T0062350.1 MGP_CBAJ_G0027344.1 mouse_genomes_project 3 109083505 109155306 - MGP_CBAJ_P0062350 Man1a2 protein_coding protein_coding MGP_CBAJ_T0062351.1 MGP_CBAJ_G0027344.1 mouse_genomes_project 3 109110478 109155819 - MGP_CBAJ_P0062351 Man1a2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062352.1 MGP_CBAJ_G0027344.1 mouse_genomes_project 3 109122882 109156002 - Man1a2 protein_coding processed_transcript MGP_CBAJ_T0062353.1 MGP_CBAJ_G0027344.1 mouse_genomes_project 3 109155286 109156153 - Man1a2 protein_coding processed_transcript MGP_CBAJ_T0060234.1 MGP_CBAJ_G0026870.1 mouse_genomes_project 3 41429611 41449737 + MGP_CBAJ_P0060234 Slc25a31 protein_coding protein_coding MGP_CBAJ_T0062607.1 MGP_CBAJ_G0027399.1 mouse_genomes_project 3 115007313 115009043 + Tmigd3 protein_coding processed_transcript MGP_CBAJ_T0062608.1 MGP_CBAJ_G0027399.1 mouse_genomes_project 3 115007317 115059872 + MGP_CBAJ_P0062608 Tmigd3 protein_coding protein_coding MGP_CBAJ_T0062609.1 MGP_CBAJ_G0027399.1 mouse_genomes_project 3 115007317 115059791 + MGP_CBAJ_P0062609 Tmigd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062610.1 MGP_CBAJ_G0027399.1 mouse_genomes_project 3 115007387 115008273 + Tmigd3 protein_coding processed_transcript MGP_CBAJ_T0062612.1 MGP_CBAJ_G0027399.1 mouse_genomes_project 3 115040116 115054507 + MGP_CBAJ_P0062612 Tmigd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062614.1 MGP_CBAJ_G0027399.1 mouse_genomes_project 3 115049846 115059875 + MGP_CBAJ_P0062614 Tmigd3 protein_coding protein_coding MGP_CBAJ_T0062615.1 MGP_CBAJ_G0027399.1 mouse_genomes_project 3 115049846 115059878 + MGP_CBAJ_P0062615 Tmigd3 protein_coding protein_coding MGP_CBAJ_T0010397.1 MGP_CBAJ_G0008535.1 mouse_genomes_project 3 94734706 94734793 + Mir3093 miRNA miRNA MGP_CBAJ_T0001202.1 MGP_CBAJ_G0001129.1 mouse_genomes_project 3 73090377 73093359 - TEC TEC MGP_CBAJ_T0013858.1 MGP_CBAJ_G0011970.1 mouse_genomes_project 3 55236134 55236453 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099213.1 MGP_CBAJ_G0037468.1 mouse_genomes_project 3 126888817 126888993 - Gm22361 snRNA snRNA MGP_CBAJ_T0014146.1 MGP_CBAJ_G0012258.1 mouse_genomes_project 3 150755433 150756657 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014052.1 MGP_CBAJ_G0012164.1 mouse_genomes_project 3 117478074 117478477 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013980.1 MGP_CBAJ_G0012092.1 mouse_genomes_project 3 99247488 99247833 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101850.1 MGP_CBAJ_G0039881.1 mouse_genomes_project 3 68507158 68507734 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0014076.1 MGP_CBAJ_G0012188.1 mouse_genomes_project 3 125464493 125464914 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060510.1 MGP_CBAJ_G0026917.1 mouse_genomes_project 3 58235955 58834196 - MGP_CBAJ_P0060510 Nbea protein_coding protein_coding MGP_CBAJ_T0060511.1 MGP_CBAJ_G0026917.1 mouse_genomes_project 3 58235959 58303724 - Nbea protein_coding processed_transcript MGP_CBAJ_T0060512.1 MGP_CBAJ_G0026917.1 mouse_genomes_project 3 58237280 58406441 - Nbea protein_coding processed_transcript MGP_CBAJ_T0060513.1 MGP_CBAJ_G0026917.1 mouse_genomes_project 3 58309143 58339421 - Nbea protein_coding retained_intron MGP_CBAJ_T0060514.1 MGP_CBAJ_G0026917.1 mouse_genomes_project 3 58398260 58407484 - Nbea protein_coding retained_intron MGP_CBAJ_T0060515.1 MGP_CBAJ_G0026917.1 mouse_genomes_project 3 58399169 58403029 - Nbea protein_coding retained_intron MGP_CBAJ_T0060517.1 MGP_CBAJ_G0026917.1 mouse_genomes_project 3 58591246 58600999 - Nbea protein_coding retained_intron MGP_CBAJ_T0060518.1 MGP_CBAJ_G0026917.1 mouse_genomes_project 3 58634882 58637307 - Nbea protein_coding retained_intron MGP_CBAJ_T0060519.1 MGP_CBAJ_G0026917.1 mouse_genomes_project 3 58650137 58655503 - Nbea protein_coding retained_intron MGP_CBAJ_T0060520.1 MGP_CBAJ_G0026917.1 mouse_genomes_project 3 58662055 58670446 - Nbea protein_coding retained_intron MGP_CBAJ_T0007410.1 MGP_CBAJ_G0006066.1 mouse_genomes_project 3 38279767 38286009 + Gm42921 lincRNA lincRNA MGP_CBAJ_T0098375.1 MGP_CBAJ_G0036641.1 mouse_genomes_project 3 115145092 115146615 - Gm42721 sense_intronic sense_intronic MGP_CBAJ_T0007443.1 MGP_CBAJ_G0006089.1 mouse_genomes_project 3 54995292 55045661 + Gm2447 lincRNA lincRNA MGP_CBAJ_T0007444.1 MGP_CBAJ_G0006089.1 mouse_genomes_project 3 55028516 55045659 + Gm2447 lincRNA lincRNA MGP_CBAJ_T0010381.1 MGP_CBAJ_G0008519.1 mouse_genomes_project 3 33297516 33297621 - Gm27974 miRNA miRNA MGP_CBAJ_T0013775.1 MGP_CBAJ_G0011887.1 mouse_genomes_project 3 22361024 22361400 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001072.1 MGP_CBAJ_G0001001.1 mouse_genomes_project 3 6087573 6090539 - TEC TEC MGP_CBAJ_T0098370.1 MGP_CBAJ_G0036636.1 mouse_genomes_project 3 114594494 114596443 + Gm43847 sense_intronic sense_intronic MGP_CBAJ_T0001165.1 MGP_CBAJ_G0001092.1 mouse_genomes_project 3 54154244 54154863 - TEC TEC MGP_CBAJ_T0004268.1 MGP_CBAJ_G0003728.1 mouse_genomes_project 3 126509591 126528169 + Gm43109 antisense antisense MGP_CBAJ_T0014105.1 MGP_CBAJ_G0012217.1 mouse_genomes_project 3 135615994 135616241 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014079.1 MGP_CBAJ_G0012191.1 mouse_genomes_project 3 126975113 126975555 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100448.1 MGP_CBAJ_G0038703.1 mouse_genomes_project 3 58586812 58586944 - Gm22784 snoRNA snoRNA MGP_CBAJ_T0100435.1 MGP_CBAJ_G0038690.1 mouse_genomes_project 3 26430972 26431086 + Gm25152 snoRNA snoRNA MGP_CBAJ_T0011403.1 MGP_CBAJ_G0009541.1 mouse_genomes_project 3 12082354 12082635 - Gm22026 misc_RNA misc_RNA MGP_CBAJ_T0061857.1 MGP_CBAJ_G0027238.1 mouse_genomes_project 3 102420232 102768549 + MGP_CBAJ_P0061857 protein_coding protein_coding MGP_CBAJ_T0061858.1 MGP_CBAJ_G0027238.1 mouse_genomes_project 3 102420323 102768556 + MGP_CBAJ_P0061858 protein_coding protein_coding MGP_CBAJ_T0061879.1 MGP_CBAJ_G0027238.1 mouse_genomes_project 3 102767208 102768587 + protein_coding retained_intron MGP_CBAJ_T0007388.1 MGP_CBAJ_G0006047.1 mouse_genomes_project 3 30275343 30276729 - lincRNA lincRNA MGP_CBAJ_T0061328.1 MGP_CBAJ_G0027099.1 mouse_genomes_project 3 95624022 95633374 - MGP_CBAJ_P0061328 Msto1 protein_coding protein_coding MGP_CBAJ_T0061329.1 MGP_CBAJ_G0027099.1 mouse_genomes_project 3 95627543 95631517 - Msto1 protein_coding retained_intron MGP_CBAJ_T0061330.1 MGP_CBAJ_G0027099.1 mouse_genomes_project 3 95629057 95633442 - MGP_CBAJ_P0061330 Msto1 protein_coding protein_coding MGP_CBAJ_T0061331.1 MGP_CBAJ_G0027099.1 mouse_genomes_project 3 95629086 95633346 - Msto1 protein_coding retained_intron MGP_CBAJ_T0061332.1 MGP_CBAJ_G0027099.1 mouse_genomes_project 3 95630801 95633325 - Msto1 protein_coding retained_intron MGP_CBAJ_T0063334.1 MGP_CBAJ_G0027548.1 mouse_genomes_project 3 141813810 141829935 - MGP_CBAJ_P0063334 Lrit3 protein_coding protein_coding MGP_CBAJ_T0063335.1 MGP_CBAJ_G0027548.1 mouse_genomes_project 3 141814220 141829935 - MGP_CBAJ_P0063335 Lrit3 protein_coding protein_coding MGP_CBAJ_T0063336.1 MGP_CBAJ_G0027548.1 mouse_genomes_project 3 141816847 141826426 - Lrit3 protein_coding retained_intron MGP_CBAJ_T0013976.1 MGP_CBAJ_G0012088.1 mouse_genomes_project 3 97656173 97656907 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007383.1 MGP_CBAJ_G0006042.1 mouse_genomes_project 3 22458492 22512948 + 4930412E21Rik lincRNA lincRNA MGP_CBAJ_T0014100.1 MGP_CBAJ_G0012212.1 mouse_genomes_project 3 134279777 134280201 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098353.1 MGP_CBAJ_G0036619.1 mouse_genomes_project 3 113045801 113048238 - Gm42700 sense_intronic sense_intronic MGP_CBAJ_T0014059.1 MGP_CBAJ_G0012171.1 mouse_genomes_project 3 120039139 120039476 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060869.1 MGP_CBAJ_G0027004.1 mouse_genomes_project 3 84888114 85011642 - MGP_CBAJ_P0060869 Fnip2 protein_coding protein_coding MGP_CBAJ_T0060870.1 MGP_CBAJ_G0027004.1 mouse_genomes_project 3 84889008 84898325 - Fnip2 protein_coding retained_intron MGP_CBAJ_T0060871.1 MGP_CBAJ_G0027004.1 mouse_genomes_project 3 84891415 85011528 - MGP_CBAJ_P0060871 Fnip2 protein_coding protein_coding MGP_CBAJ_T0060872.1 MGP_CBAJ_G0027004.1 mouse_genomes_project 3 84891714 84932813 - Fnip2 protein_coding retained_intron MGP_CBAJ_T0060873.1 MGP_CBAJ_G0027004.1 mouse_genomes_project 3 84936517 84951915 - Fnip2 protein_coding processed_transcript MGP_CBAJ_T0060874.1 MGP_CBAJ_G0027004.1 mouse_genomes_project 3 84940182 85011525 - Fnip2 protein_coding retained_intron MGP_CBAJ_T0014181.1 MGP_CBAJ_G0012293.1 mouse_genomes_project 3 166707624 166708331 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001333.1 MGP_CBAJ_G0001259.1 mouse_genomes_project 3 161523384 161527881 - TEC TEC MGP_CBAJ_T0011420.1 MGP_CBAJ_G0009558.1 mouse_genomes_project 3 111887585 111887885 + Gm23820 misc_RNA misc_RNA MGP_CBAJ_T0063447.1 MGP_CBAJ_G0027572.1 mouse_genomes_project 3 145403326 145422550 + MGP_CBAJ_P0063447 Ints12 protein_coding protein_coding MGP_CBAJ_T0063448.1 MGP_CBAJ_G0027572.1 mouse_genomes_project 3 145403424 145413581 + Ints12 protein_coding retained_intron MGP_CBAJ_T0063449.1 MGP_CBAJ_G0027572.1 mouse_genomes_project 3 145411873 145418599 + Ints12 protein_coding processed_transcript MGP_CBAJ_T0062238.1 MGP_CBAJ_G0027314.1 mouse_genomes_project 3 105056420 105096154 - MGP_CBAJ_P0062238 Gpr89 protein_coding protein_coding MGP_CBAJ_T0062239.1 MGP_CBAJ_G0027314.1 mouse_genomes_project 3 105056730 105083011 - Gpr89 protein_coding processed_transcript MGP_CBAJ_T0062240.1 MGP_CBAJ_G0027314.1 mouse_genomes_project 3 105059625 105064345 - Gpr89 protein_coding retained_intron MGP_CBAJ_T0062241.1 MGP_CBAJ_G0027314.1 mouse_genomes_project 3 105068723 105089774 - Gpr89 protein_coding processed_transcript MGP_CBAJ_T0062242.1 MGP_CBAJ_G0027314.1 mouse_genomes_project 3 105070612 105088666 - Gpr89 protein_coding processed_transcript MGP_CBAJ_T0062243.1 MGP_CBAJ_G0027314.1 mouse_genomes_project 3 105070612 105096120 - MGP_CBAJ_P0062243 Gpr89 protein_coding nonsense_mediated_decay MGP_CBAJ_T0013748.1 MGP_CBAJ_G0011860.1 mouse_genomes_project 3 12967087 12967306 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064072.1 MGP_CBAJ_G0027685.1 mouse_genomes_project 3 171862042 172658676 + MGP_CBAJ_P0064072 Negr1 protein_coding protein_coding MGP_CBAJ_T0064073.1 MGP_CBAJ_G0027685.1 mouse_genomes_project 3 171862207 172505846 + MGP_CBAJ_P0064073 Negr1 protein_coding protein_coding MGP_CBAJ_T0064074.1 MGP_CBAJ_G0027685.1 mouse_genomes_project 3 171862217 172533915 + MGP_CBAJ_P0064074 Negr1 protein_coding protein_coding MGP_CBAJ_T0064075.1 MGP_CBAJ_G0027685.1 mouse_genomes_project 3 171862394 171866391 + Negr1 protein_coding retained_intron MGP_CBAJ_T0064076.1 MGP_CBAJ_G0027685.1 mouse_genomes_project 3 171862398 172342110 + MGP_CBAJ_P0064076 Negr1 protein_coding protein_coding MGP_CBAJ_T0060195.1 MGP_CBAJ_G0026862.1 mouse_genomes_project 3 37829168 37892013 + MGP_CBAJ_P0060195 Fgf2 protein_coding protein_coding MGP_CBAJ_T0060196.1 MGP_CBAJ_G0026862.1 mouse_genomes_project 3 37829475 37896713 + MGP_CBAJ_P0060196 Fgf2 protein_coding protein_coding MGP_CBAJ_T0060197.1 MGP_CBAJ_G0026862.1 mouse_genomes_project 3 37829672 37891437 + MGP_CBAJ_P0060197 Fgf2 protein_coding protein_coding MGP_CBAJ_T0060198.1 MGP_CBAJ_G0026862.1 mouse_genomes_project 3 37855859 37891437 + Fgf2 protein_coding processed_transcript MGP_CBAJ_T0060199.1 MGP_CBAJ_G0026862.1 mouse_genomes_project 3 37872585 37891437 + Fgf2 protein_coding processed_transcript MGP_CBAJ_T0060200.1 MGP_CBAJ_G0026862.1 mouse_genomes_project 3 37872681 37891437 + MGP_CBAJ_P0060200 Fgf2 protein_coding protein_coding MGP_CBAJ_T0060201.1 MGP_CBAJ_G0026862.1 mouse_genomes_project 3 37872681 37891437 + MGP_CBAJ_P0060201 Fgf2 protein_coding protein_coding MGP_CBAJ_T0060202.1 MGP_CBAJ_G0026862.1 mouse_genomes_project 3 37891180 37891437 + Fgf2 protein_coding retained_intron MGP_CBAJ_T0004184.1 MGP_CBAJ_G0003679.1 mouse_genomes_project 3 88722916 88791646 + Rbm46os antisense antisense MGP_CBAJ_T0004185.1 MGP_CBAJ_G0003679.1 mouse_genomes_project 3 88722916 88793564 + Rbm46os antisense antisense MGP_CBAJ_T0004186.1 MGP_CBAJ_G0003679.1 mouse_genomes_project 3 88750379 88794209 + Rbm46os antisense antisense MGP_CBAJ_T0062461.1 MGP_CBAJ_G0027367.1 mouse_genomes_project 3 111914926 111982852 + MGP_CBAJ_P0062461 Dennd2c protein_coding protein_coding MGP_CBAJ_T0062462.1 MGP_CBAJ_G0027367.1 mouse_genomes_project 3 111914982 111970575 + Dennd2c protein_coding retained_intron MGP_CBAJ_T0062463.1 MGP_CBAJ_G0027367.1 mouse_genomes_project 3 111939849 111982821 + MGP_CBAJ_P0062463 Dennd2c protein_coding protein_coding MGP_CBAJ_T0062464.1 MGP_CBAJ_G0027367.1 mouse_genomes_project 3 111953778 111981747 + Dennd2c protein_coding processed_transcript MGP_CBAJ_T0062465.1 MGP_CBAJ_G0027367.1 mouse_genomes_project 3 111954270 111982814 + Dennd2c protein_coding retained_intron MGP_CBAJ_T0062466.1 MGP_CBAJ_G0027367.1 mouse_genomes_project 3 111962466 111971733 + Dennd2c protein_coding retained_intron MGP_CBAJ_T0001183.1 MGP_CBAJ_G0001110.1 mouse_genomes_project 3 58769733 58775243 - TEC TEC MGP_CBAJ_T0011418.1 MGP_CBAJ_G0009556.1 mouse_genomes_project 3 104519514 104519937 - Terc misc_RNA misc_RNA MGP_CBAJ_T0100505.1 MGP_CBAJ_G0038760.1 mouse_genomes_project 3 172545613 172545745 + Gm24373 snoRNA snoRNA MGP_CBAJ_T0007484.1 MGP_CBAJ_G0006120.1 mouse_genomes_project 3 85803413 85860821 - Gm37971 lincRNA lincRNA MGP_CBAJ_T0059701.1 MGP_CBAJ_G0026764.1 mouse_genomes_project 3 12657010 12698171 + MGP_CBAJ_P0059701 Lrrcc1 protein_coding protein_coding MGP_CBAJ_T0059702.1 MGP_CBAJ_G0026764.1 mouse_genomes_project 3 12657045 12691521 + MGP_CBAJ_P0059702 Lrrcc1 protein_coding protein_coding MGP_CBAJ_T0059703.1 MGP_CBAJ_G0026764.1 mouse_genomes_project 3 12657046 12689323 + MGP_CBAJ_P0059703 Lrrcc1 protein_coding protein_coding MGP_CBAJ_T0059704.1 MGP_CBAJ_G0026764.1 mouse_genomes_project 3 12657101 12685383 + MGP_CBAJ_P0059704 Lrrcc1 protein_coding protein_coding MGP_CBAJ_T0059705.1 MGP_CBAJ_G0026764.1 mouse_genomes_project 3 12657156 12674692 + MGP_CBAJ_P0059705 Lrrcc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059706.1 MGP_CBAJ_G0026764.1 mouse_genomes_project 3 12671335 12689626 + MGP_CBAJ_P0059706 Lrrcc1 protein_coding protein_coding MGP_CBAJ_T0059707.1 MGP_CBAJ_G0026764.1 mouse_genomes_project 3 12671411 12677692 + MGP_CBAJ_P0059707 Lrrcc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059708.1 MGP_CBAJ_G0026764.1 mouse_genomes_project 3 12673598 12682545 + MGP_CBAJ_P0059708 Lrrcc1 protein_coding protein_coding MGP_CBAJ_T0101847.1 MGP_CBAJ_G0039878.1 mouse_genomes_project 3 67716726 67745029 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0007379.1 MGP_CBAJ_G0006038.1 mouse_genomes_project 3 20913865 20914650 - Gm43674 lincRNA lincRNA MGP_CBAJ_T0063899.1 MGP_CBAJ_G0027661.1 mouse_genomes_project 3 166509735 166558947 - MGP_CBAJ_P0063899 Ptgfr protein_coding protein_coding MGP_CBAJ_T0063900.1 MGP_CBAJ_G0027661.1 mouse_genomes_project 3 166514534 166557309 - MGP_CBAJ_P0063900 Ptgfr protein_coding protein_coding MGP_CBAJ_T0063901.1 MGP_CBAJ_G0027661.1 mouse_genomes_project 3 166514906 166555435 - Ptgfr protein_coding processed_transcript MGP_CBAJ_T0060322.1 MGP_CBAJ_G0026881.1 mouse_genomes_project 3 46637475 46642124 + MGP_CBAJ_P0060322 Pcdh10 protein_coding protein_coding MGP_CBAJ_T0060323.1 MGP_CBAJ_G0026881.1 mouse_genomes_project 3 46637483 46666994 + MGP_CBAJ_P0060323 Pcdh10 protein_coding protein_coding MGP_CBAJ_T0060324.1 MGP_CBAJ_G0026881.1 mouse_genomes_project 3 46637502 46702435 + MGP_CBAJ_P0060324 Pcdh10 protein_coding protein_coding MGP_CBAJ_T0060325.1 MGP_CBAJ_G0026881.1 mouse_genomes_project 3 46637504 46687576 + MGP_CBAJ_P0060325 Pcdh10 protein_coding protein_coding MGP_CBAJ_T0060326.1 MGP_CBAJ_G0026881.1 mouse_genomes_project 3 46641721 46699296 + Pcdh10 protein_coding processed_transcript MGP_CBAJ_T0098349.1 MGP_CBAJ_G0036615.1 mouse_genomes_project 3 112794446 112795706 + Gm15472 sense_intronic sense_intronic MGP_CBAJ_T0060203.1 MGP_CBAJ_G0026863.1 mouse_genomes_project 3 37891549 37906793 - MGP_CBAJ_P0060203 Nudt6 protein_coding protein_coding MGP_CBAJ_T0060204.1 MGP_CBAJ_G0026863.1 mouse_genomes_project 3 37891549 37906177 - MGP_CBAJ_P0060204 Nudt6 protein_coding protein_coding MGP_CBAJ_T0060205.1 MGP_CBAJ_G0026863.1 mouse_genomes_project 3 37891625 37906187 - MGP_CBAJ_P0060205 Nudt6 protein_coding protein_coding MGP_CBAJ_T0060206.1 MGP_CBAJ_G0026863.1 mouse_genomes_project 3 37891714 37897280 - Nudt6 protein_coding processed_transcript MGP_CBAJ_T0060207.1 MGP_CBAJ_G0026863.1 mouse_genomes_project 3 37891732 37906167 - MGP_CBAJ_P0060207 Nudt6 protein_coding protein_coding MGP_CBAJ_T0060208.1 MGP_CBAJ_G0026863.1 mouse_genomes_project 3 37891991 37906170 - MGP_CBAJ_P0060208 Nudt6 protein_coding protein_coding MGP_CBAJ_T0060209.1 MGP_CBAJ_G0026863.1 mouse_genomes_project 3 37896110 37906154 - MGP_CBAJ_P0060209 Nudt6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060210.1 MGP_CBAJ_G0026863.1 mouse_genomes_project 3 37898996 37906163 - MGP_CBAJ_P0060210 Nudt6 protein_coding protein_coding MGP_CBAJ_T0001234.1 MGP_CBAJ_G0001161.1 mouse_genomes_project 3 105454874 105458102 + TEC TEC MGP_CBAJ_T0001282.1 MGP_CBAJ_G0001209.1 mouse_genomes_project 3 138216665 138220202 + TEC TEC MGP_CBAJ_T0100483.1 MGP_CBAJ_G0038738.1 mouse_genomes_project 3 125708276 125708408 + Gm22337 snoRNA snoRNA MGP_CBAJ_T0004220.1 MGP_CBAJ_G0003702.1 mouse_genomes_project 3 104215656 104220607 - Gm17690 antisense antisense MGP_CBAJ_T0004221.1 MGP_CBAJ_G0003702.1 mouse_genomes_project 3 104219567 104220609 - Gm17690 antisense antisense MGP_CBAJ_T0060211.1 MGP_CBAJ_G0026864.1 mouse_genomes_project 3 37906492 38074562 + MGP_CBAJ_P0060211 Spata5 protein_coding protein_coding MGP_CBAJ_T0060212.1 MGP_CBAJ_G0026864.1 mouse_genomes_project 3 37906904 38074562 + MGP_CBAJ_P0060212 Spata5 protein_coding protein_coding MGP_CBAJ_T0060213.1 MGP_CBAJ_G0026864.1 mouse_genomes_project 3 37906918 38074562 + MGP_CBAJ_P0060213 Spata5 protein_coding protein_coding MGP_CBAJ_T0060214.1 MGP_CBAJ_G0026864.1 mouse_genomes_project 3 37906979 37913995 + Spata5 protein_coding processed_transcript MGP_CBAJ_T0060215.1 MGP_CBAJ_G0026864.1 mouse_genomes_project 3 37907458 37914757 + Spata5 protein_coding processed_transcript MGP_CBAJ_T0060216.1 MGP_CBAJ_G0026864.1 mouse_genomes_project 3 37920682 37927935 + Spata5 protein_coding processed_transcript MGP_CBAJ_T0060217.1 MGP_CBAJ_G0026864.1 mouse_genomes_project 3 37925349 37928055 + Spata5 protein_coding retained_intron MGP_CBAJ_T0060218.1 MGP_CBAJ_G0026864.1 mouse_genomes_project 3 37940345 38028402 + Spata5 protein_coding retained_intron MGP_CBAJ_T0060219.1 MGP_CBAJ_G0026864.1 mouse_genomes_project 3 37988904 38074475 + Spata5 protein_coding processed_transcript MGP_CBAJ_T0060220.1 MGP_CBAJ_G0026864.1 mouse_genomes_project 3 38069153 38074556 + Spata5 protein_coding processed_transcript MGP_CBAJ_T0062954.1 MGP_CBAJ_G0027481.1 mouse_genomes_project 3 126301034 126304921 - Slc30a7 protein_coding processed_transcript MGP_CBAJ_T0062955.1 MGP_CBAJ_G0027481.1 mouse_genomes_project 3 126301034 126374999 - MGP_CBAJ_P0062955 Slc30a7 protein_coding protein_coding MGP_CBAJ_T0062956.1 MGP_CBAJ_G0027481.1 mouse_genomes_project 3 126347610 126355480 - Slc30a7 protein_coding processed_transcript MGP_CBAJ_T0062957.1 MGP_CBAJ_G0027481.1 mouse_genomes_project 3 126354481 126356746 - Slc30a7 protein_coding retained_intron MGP_CBAJ_T0063543.1 MGP_CBAJ_G0027587.1 mouse_genomes_project 3 148584710 148588565 - MGP_CBAJ_P0063543 Scoc protein_coding protein_coding MGP_CBAJ_T0061785.1 MGP_CBAJ_G0027218.1 mouse_genomes_project 3 100586642 100591332 + MGP_CBAJ_P0061785 Crnn protein_coding protein_coding MGP_CBAJ_T0061786.1 MGP_CBAJ_G0027218.1 mouse_genomes_project 3 100586644 100591702 + MGP_CBAJ_P0061786 Crnn protein_coding protein_coding MGP_CBAJ_T0061787.1 MGP_CBAJ_G0027218.1 mouse_genomes_project 3 100590070 100591701 + MGP_CBAJ_P0061787 Crnn protein_coding protein_coding MGP_CBAJ_T0001073.1 MGP_CBAJ_G0001002.1 mouse_genomes_project 3 6973000 6976763 + TEC TEC MGP_CBAJ_T0001209.1 MGP_CBAJ_G0001136.1 mouse_genomes_project 3 81645322 81648883 + TEC TEC MGP_CBAJ_T0007605.1 MGP_CBAJ_G0006212.1 mouse_genomes_project 3 143898255 144202350 + lincRNA lincRNA MGP_CBAJ_T0063861.1 MGP_CBAJ_G0027656.1 mouse_genomes_project 3 160941646 161042123 + Ttll7 protein_coding retained_intron MGP_CBAJ_T0063862.1 MGP_CBAJ_G0027656.1 mouse_genomes_project 3 160941646 161084430 + MGP_CBAJ_P0063862 Ttll7 protein_coding protein_coding MGP_CBAJ_T0063863.1 MGP_CBAJ_G0027656.1 mouse_genomes_project 3 160941646 161085689 + MGP_CBAJ_P0063863 Ttll7 protein_coding protein_coding MGP_CBAJ_T0063864.1 MGP_CBAJ_G0027656.1 mouse_genomes_project 3 160988931 161081431 + MGP_CBAJ_P0063864 Ttll7 protein_coding protein_coding MGP_CBAJ_T0063865.1 MGP_CBAJ_G0027656.1 mouse_genomes_project 3 160991411 160993262 + MGP_CBAJ_P0063865 Ttll7 protein_coding protein_coding MGP_CBAJ_T0063866.1 MGP_CBAJ_G0027656.1 mouse_genomes_project 3 161045714 161083600 + Ttll7 protein_coding retained_intron MGP_CBAJ_T0063219.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138166840 138255676 + Camk2d protein_coding processed_transcript MGP_CBAJ_T0063220.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138167489 138443502 + MGP_CBAJ_P0063220 Camk2d protein_coding protein_coding MGP_CBAJ_T0063221.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138167498 138443500 + MGP_CBAJ_P0063221 Camk2d protein_coding protein_coding MGP_CBAJ_T0063222.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138167536 138443504 + MGP_CBAJ_P0063222 Camk2d protein_coding protein_coding MGP_CBAJ_T0063223.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138167543 138414356 + MGP_CBAJ_P0063223 Camk2d protein_coding protein_coding MGP_CBAJ_T0063224.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138167545 138444915 + MGP_CBAJ_P0063224 Camk2d protein_coding protein_coding MGP_CBAJ_T0063225.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138167547 138351909 + Camk2d protein_coding retained_intron MGP_CBAJ_T0063226.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138167548 138439051 + Camk2d protein_coding retained_intron MGP_CBAJ_T0063227.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138167548 138402038 + MGP_CBAJ_P0063227 Camk2d protein_coding nonsense_mediated_decay MGP_CBAJ_T0063228.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138167558 138441304 + MGP_CBAJ_P0063228 Camk2d protein_coding nonsense_mediated_decay MGP_CBAJ_T0063229.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138167573 138442419 + Camk2d protein_coding processed_transcript MGP_CBAJ_T0063230.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138167635 138442292 + MGP_CBAJ_P0063230 Camk2d protein_coding protein_coding MGP_CBAJ_T0063231.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138167744 138444884 + MGP_CBAJ_P0063231 Camk2d protein_coding protein_coding MGP_CBAJ_T0063232.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138167846 138441811 + MGP_CBAJ_P0063232 Camk2d protein_coding protein_coding MGP_CBAJ_T0063233.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138167879 138256373 + Camk2d protein_coding retained_intron MGP_CBAJ_T0063234.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138167937 138442273 + Camk2d protein_coding retained_intron MGP_CBAJ_T0063235.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138167952 138442916 + MGP_CBAJ_P0063235 Camk2d protein_coding protein_coding MGP_CBAJ_T0063236.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138360908 138369825 + Camk2d protein_coding retained_intron MGP_CBAJ_T0063237.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138361484 138398876 + Camk2d protein_coding processed_transcript MGP_CBAJ_T0063238.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138369073 138396708 + Camk2d protein_coding retained_intron MGP_CBAJ_T0063239.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138383591 138438850 + Camk2d protein_coding retained_intron MGP_CBAJ_T0063240.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138386462 138442602 + Camk2d protein_coding retained_intron MGP_CBAJ_T0063241.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138389951 138440141 + Camk2d protein_coding retained_intron MGP_CBAJ_T0063242.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138389951 138440141 + Camk2d protein_coding retained_intron MGP_CBAJ_T0063243.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138391158 138441768 + MGP_CBAJ_P0063243 Camk2d protein_coding protein_coding MGP_CBAJ_T0063244.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138392743 138395117 + Camk2d protein_coding retained_intron MGP_CBAJ_T0063245.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138394079 138441487 + MGP_CBAJ_P0063245 Camk2d protein_coding protein_coding MGP_CBAJ_T0063246.1 MGP_CBAJ_G0027534.1 mouse_genomes_project 3 138395384 138398477 + Camk2d protein_coding retained_intron MGP_CBAJ_T0059620.1 MGP_CBAJ_G0026738.1 mouse_genomes_project 3 2546719 2562711 - MGP_CBAJ_P0059620 Pex2 protein_coding protein_coding MGP_CBAJ_T0059621.1 MGP_CBAJ_G0026738.1 mouse_genomes_project 3 2546719 2562711 - MGP_CBAJ_P0059621 Pex2 protein_coding protein_coding MGP_CBAJ_T0059622.1 MGP_CBAJ_G0026738.1 mouse_genomes_project 3 2547030 2550267 - MGP_CBAJ_P0059622 Pex2 protein_coding protein_coding MGP_CBAJ_T0059623.1 MGP_CBAJ_G0026738.1 mouse_genomes_project 3 2547031 2562706 - MGP_CBAJ_P0059623 Pex2 protein_coding protein_coding MGP_CBAJ_T0059624.1 MGP_CBAJ_G0026738.1 mouse_genomes_project 3 2547031 2562800 - MGP_CBAJ_P0059624 Pex2 protein_coding protein_coding MGP_CBAJ_T0059625.1 MGP_CBAJ_G0026738.1 mouse_genomes_project 3 2547035 2562689 - MGP_CBAJ_P0059625 Pex2 protein_coding protein_coding MGP_CBAJ_T0007530.1 MGP_CBAJ_G0006152.1 mouse_genomes_project 3 104504394 104505259 - 4930477E14Rik lincRNA lincRNA MGP_CBAJ_T0098031.1 MGP_CBAJ_G0036304.1 mouse_genomes_project 3 24722416 24722551 + Gm24250 rRNA rRNA MGP_CBAJ_T0060468.1 MGP_CBAJ_G0026909.1 mouse_genomes_project 3 57333702 57338379 - MGP_CBAJ_P0060468 Rfxap protein_coding protein_coding MGP_CBAJ_T0060469.1 MGP_CBAJ_G0026909.1 mouse_genomes_project 3 57334807 57336355 - Rfxap protein_coding processed_transcript MGP_CBAJ_T0060470.1 MGP_CBAJ_G0026909.1 mouse_genomes_project 3 57336362 57338008 - Rfxap protein_coding processed_transcript MGP_CBAJ_T0014068.1 MGP_CBAJ_G0012180.1 mouse_genomes_project 3 122599889 122600282 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013941.1 MGP_CBAJ_G0012053.1 mouse_genomes_project 3 83126955 83127327 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0063785.1 MGP_CBAJ_G0027639.1 mouse_genomes_project 3 159869992 159872359 + Bcl10 protein_coding retained_intron MGP_CBAJ_T0063786.1 MGP_CBAJ_G0027639.1 mouse_genomes_project 3 159871450 159881520 + MGP_CBAJ_P0063786 Bcl10 protein_coding protein_coding MGP_CBAJ_T0063787.1 MGP_CBAJ_G0027639.1 mouse_genomes_project 3 159871545 159875119 + Bcl10 protein_coding processed_transcript MGP_CBAJ_T0004265.1 MGP_CBAJ_G0003725.1 mouse_genomes_project 3 118289360 118293088 + Gm27244 antisense antisense MGP_CBAJ_T0099216.1 MGP_CBAJ_G0037471.1 mouse_genomes_project 3 134650408 134650538 - Gm22713 snRNA snRNA MGP_CBAJ_T0059734.1 MGP_CBAJ_G0026775.1 mouse_genomes_project 3 14219846 14319882 - MGP_CBAJ_P0059734 Gm5150 protein_coding protein_coding MGP_CBAJ_T0059735.1 MGP_CBAJ_G0026775.1 mouse_genomes_project 3 14221045 14319777 - MGP_CBAJ_P0059735 Gm5150 protein_coding protein_coding MGP_CBAJ_T0014152.1 MGP_CBAJ_G0012264.1 mouse_genomes_project 3 151586164 151586353 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064000.1 MGP_CBAJ_G0027673.1 mouse_genomes_project 3 168825161 168836076 + MGP_CBAJ_P0064000 Asb17 protein_coding protein_coding MGP_CBAJ_T0064001.1 MGP_CBAJ_G0027673.1 mouse_genomes_project 3 168825218 168834581 + MGP_CBAJ_P0064001 Asb17 protein_coding nonsense_mediated_decay MGP_CBAJ_T0007395.1 MGP_CBAJ_G0006053.1 mouse_genomes_project 3 34556181 34563904 - Gm20515 lincRNA lincRNA MGP_CBAJ_T0061764.1 MGP_CBAJ_G0027200.1 mouse_genomes_project 3 100032216 100034350 - MGP_CBAJ_P0061764 Lce1e protein_coding protein_coding MGP_CBAJ_T0007555.1 MGP_CBAJ_G0006173.1 mouse_genomes_project 3 116141599 116188235 - Gm35507 lincRNA lincRNA MGP_CBAJ_T0063952.1 MGP_CBAJ_G0027666.1 mouse_genomes_project 3 167062528 167130825 - MGP_CBAJ_P0063952 Fam73a protein_coding protein_coding MGP_CBAJ_T0063953.1 MGP_CBAJ_G0027666.1 mouse_genomes_project 3 167064610 167130823 - MGP_CBAJ_P0063953 Fam73a protein_coding protein_coding MGP_CBAJ_T0063954.1 MGP_CBAJ_G0027666.1 mouse_genomes_project 3 167075694 167130801 - MGP_CBAJ_P0063954 Fam73a protein_coding protein_coding MGP_CBAJ_T0063955.1 MGP_CBAJ_G0027666.1 mouse_genomes_project 3 167075861 167079671 - Fam73a protein_coding retained_intron MGP_CBAJ_T0063956.1 MGP_CBAJ_G0027666.1 mouse_genomes_project 3 167086864 167114150 - MGP_CBAJ_P0063956 Fam73a protein_coding protein_coding MGP_CBAJ_T0063957.1 MGP_CBAJ_G0027666.1 mouse_genomes_project 3 167087038 167093801 - Fam73a protein_coding retained_intron MGP_CBAJ_T0063958.1 MGP_CBAJ_G0027666.1 mouse_genomes_project 3 167093343 167127548 - MGP_CBAJ_P0063958 Fam73a protein_coding nonsense_mediated_decay MGP_CBAJ_T0063959.1 MGP_CBAJ_G0027666.1 mouse_genomes_project 3 167127094 167130802 - Fam73a protein_coding retained_intron MGP_CBAJ_T0001194.1 MGP_CBAJ_G0001121.1 mouse_genomes_project 3 66898274 66898760 + TEC TEC MGP_CBAJ_T0098327.1 MGP_CBAJ_G0036593.1 mouse_genomes_project 3 102243634 102244889 - Gm43768 sense_intronic sense_intronic MGP_CBAJ_T0013880.1 MGP_CBAJ_G0011992.1 mouse_genomes_project 3 62771893 62772007 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0063408.1 MGP_CBAJ_G0027563.1 mouse_genomes_project 3 143472067 143489385 - MGP_CBAJ_P0063408 Cyp2u1 protein_coding protein_coding MGP_CBAJ_T0063409.1 MGP_CBAJ_G0027563.1 mouse_genomes_project 3 143479448 143489361 - MGP_CBAJ_P0063409 Cyp2u1 protein_coding protein_coding MGP_CBAJ_T0063410.1 MGP_CBAJ_G0027563.1 mouse_genomes_project 3 143480584 143489388 - Cyp2u1 protein_coding processed_transcript MGP_CBAJ_T0004261.1 MGP_CBAJ_G0003722.1 mouse_genomes_project 3 117578803 117581231 + Gm12500 antisense antisense MGP_CBAJ_T0004262.1 MGP_CBAJ_G0003722.1 mouse_genomes_project 3 117579195 117581229 + Gm12500 antisense antisense MGP_CBAJ_T0060471.1 MGP_CBAJ_G0026910.1 mouse_genomes_project 3 57434163 57453893 - MGP_CBAJ_P0060471 Sertm1 protein_coding protein_coding MGP_CBAJ_T0060472.1 MGP_CBAJ_G0026910.1 mouse_genomes_project 3 57434166 57454749 - MGP_CBAJ_P0060472 Sertm1 protein_coding protein_coding MGP_CBAJ_T0014151.1 MGP_CBAJ_G0012263.1 mouse_genomes_project 3 151546299 151546966 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001310.1 MGP_CBAJ_G0001236.1 mouse_genomes_project 3 142820315 142822686 - TEC TEC MGP_CBAJ_T0007446.1 MGP_CBAJ_G0006091.1 mouse_genomes_project 3 55186438 55201247 - Gm20750 lincRNA lincRNA MGP_CBAJ_T0062693.1 MGP_CBAJ_G0027422.1 mouse_genomes_project 3 116655865 116661134 + MGP_CBAJ_P0062693 Lamtor5 protein_coding protein_coding MGP_CBAJ_T0062694.1 MGP_CBAJ_G0027422.1 mouse_genomes_project 3 116656006 116661137 + MGP_CBAJ_P0062694 Lamtor5 protein_coding protein_coding MGP_CBAJ_T0014099.1 MGP_CBAJ_G0012211.1 mouse_genomes_project 3 134149214 134149409 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063960.1 MGP_CBAJ_G0027667.1 mouse_genomes_project 3 167136426 167190029 + MGP_CBAJ_P0063960 Usp33 protein_coding protein_coding MGP_CBAJ_T0063961.1 MGP_CBAJ_G0027667.1 mouse_genomes_project 3 167136426 167189750 + MGP_CBAJ_P0063961 Usp33 protein_coding protein_coding MGP_CBAJ_T0063962.1 MGP_CBAJ_G0027667.1 mouse_genomes_project 3 167136437 167190034 + MGP_CBAJ_P0063962 Usp33 protein_coding protein_coding MGP_CBAJ_T0063963.1 MGP_CBAJ_G0027667.1 mouse_genomes_project 3 167136460 167165215 + MGP_CBAJ_P0063963 Usp33 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063964.1 MGP_CBAJ_G0027667.1 mouse_genomes_project 3 167136463 167151607 + Usp33 protein_coding retained_intron MGP_CBAJ_T0063965.1 MGP_CBAJ_G0027667.1 mouse_genomes_project 3 167155174 167161770 + Usp33 protein_coding processed_transcript MGP_CBAJ_T0063966.1 MGP_CBAJ_G0027667.1 mouse_genomes_project 3 167157184 167160435 + Usp33 protein_coding retained_intron MGP_CBAJ_T0063967.1 MGP_CBAJ_G0027667.1 mouse_genomes_project 3 167159560 167166931 + Usp33 protein_coding retained_intron MGP_CBAJ_T0063968.1 MGP_CBAJ_G0027667.1 mouse_genomes_project 3 167161708 167168301 + MGP_CBAJ_P0063968 Usp33 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063969.1 MGP_CBAJ_G0027667.1 mouse_genomes_project 3 167178466 167188924 + Usp33 protein_coding processed_transcript MGP_CBAJ_T0063970.1 MGP_CBAJ_G0027667.1 mouse_genomes_project 3 167178954 167180673 + Usp33 protein_coding retained_intron MGP_CBAJ_T0060921.1 MGP_CBAJ_G0027014.1 mouse_genomes_project 3 87667684 87694231 + MGP_CBAJ_P0060921 Ctso protein_coding protein_coding MGP_CBAJ_T0060922.1 MGP_CBAJ_G0027014.1 mouse_genomes_project 3 87667706 87668408 + Ctso protein_coding retained_intron MGP_CBAJ_T0060923.1 MGP_CBAJ_G0027014.1 mouse_genomes_project 3 87667725 87678111 + Ctso protein_coding processed_transcript MGP_CBAJ_T0060924.1 MGP_CBAJ_G0027014.1 mouse_genomes_project 3 87687983 87691808 + Ctso protein_coding retained_intron MGP_CBAJ_T0013790.1 MGP_CBAJ_G0011902.1 mouse_genomes_project 3 33235155 33235387 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013811.1 MGP_CBAJ_G0011923.1 mouse_genomes_project 3 38103072 38103716 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060611.1 MGP_CBAJ_G0026945.1 mouse_genomes_project 3 63210704 63216354 + MGP_CBAJ_P0060611 Sucnr1 protein_coding protein_coding MGP_CBAJ_T0060612.1 MGP_CBAJ_G0026945.1 mouse_genomes_project 3 63210737 63215113 + Sucnr1 protein_coding processed_transcript MGP_CBAJ_T0062172.1 MGP_CBAJ_G0027297.1 mouse_genomes_project 3 104642111 104646144 + MGP_CBAJ_P0062172 Hfe2 protein_coding protein_coding MGP_CBAJ_T0007533.1 MGP_CBAJ_G0006155.1 mouse_genomes_project 3 106229221 106275842 + Gm5544 lincRNA lincRNA MGP_CBAJ_T0013953.1 MGP_CBAJ_G0012065.1 mouse_genomes_project 3 87064388 87064668 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061161.1 MGP_CBAJ_G0027071.1 mouse_genomes_project 3 94522240 94538354 + MGP_CBAJ_P0061161 Gpatch4 protein_coding protein_coding MGP_CBAJ_T0061162.1 MGP_CBAJ_G0027071.1 mouse_genomes_project 3 94522240 94538351 + MGP_CBAJ_P0061162 Gpatch4 protein_coding protein_coding MGP_CBAJ_T0061163.1 MGP_CBAJ_G0027071.1 mouse_genomes_project 3 94522241 94537021 + Gpatch4 protein_coding retained_intron MGP_CBAJ_T0061164.1 MGP_CBAJ_G0027071.1 mouse_genomes_project 3 94522256 94537561 + MGP_CBAJ_P0061164 Gpatch4 protein_coding protein_coding MGP_CBAJ_T0061165.1 MGP_CBAJ_G0027071.1 mouse_genomes_project 3 94522260 94538337 + MGP_CBAJ_P0061165 Gpatch4 protein_coding protein_coding MGP_CBAJ_T0063373.1 MGP_CBAJ_G0027556.1 mouse_genomes_project 3 142205218 142265835 + Col25a1 protein_coding processed_transcript MGP_CBAJ_T0063374.1 MGP_CBAJ_G0027556.1 mouse_genomes_project 3 142263843 142657796 + Col25a1 protein_coding retained_intron MGP_CBAJ_T0063375.1 MGP_CBAJ_G0027556.1 mouse_genomes_project 3 142263843 142707301 + MGP_CBAJ_P0063375 Col25a1 protein_coding protein_coding MGP_CBAJ_T0063376.1 MGP_CBAJ_G0027556.1 mouse_genomes_project 3 142263843 142712046 + MGP_CBAJ_P0063376 Col25a1 protein_coding protein_coding MGP_CBAJ_T0063377.1 MGP_CBAJ_G0027556.1 mouse_genomes_project 3 142263843 142708490 + MGP_CBAJ_P0063377 Col25a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063378.1 MGP_CBAJ_G0027556.1 mouse_genomes_project 3 142264436 142712056 + MGP_CBAJ_P0063378 Col25a1 protein_coding unknown_likely_coding MGP_CBAJ_T0063379.1 MGP_CBAJ_G0027556.1 mouse_genomes_project 3 142584050 142586793 + Col25a1 protein_coding retained_intron MGP_CBAJ_T0059975.1 MGP_CBAJ_G0026823.1 mouse_genomes_project 3 30895153 30927107 + MGP_CBAJ_P0059975 Skil protein_coding protein_coding MGP_CBAJ_T0059976.1 MGP_CBAJ_G0026823.1 mouse_genomes_project 3 30895156 30901490 + Skil protein_coding retained_intron MGP_CBAJ_T0059977.1 MGP_CBAJ_G0026823.1 mouse_genomes_project 3 30895156 30927111 + MGP_CBAJ_P0059977 Skil protein_coding protein_coding MGP_CBAJ_T0059978.1 MGP_CBAJ_G0026823.1 mouse_genomes_project 3 30895160 30921294 + MGP_CBAJ_P0059978 Skil protein_coding unknown_likely_coding MGP_CBAJ_T0059979.1 MGP_CBAJ_G0026823.1 mouse_genomes_project 3 30895160 30897989 + MGP_CBAJ_P0059979 Skil protein_coding protein_coding MGP_CBAJ_T0059980.1 MGP_CBAJ_G0026823.1 mouse_genomes_project 3 30895220 30921961 + MGP_CBAJ_P0059980 Skil protein_coding protein_coding MGP_CBAJ_T0059981.1 MGP_CBAJ_G0026823.1 mouse_genomes_project 3 30896929 30921672 + MGP_CBAJ_P0059981 Skil protein_coding protein_coding MGP_CBAJ_T0014192.1 MGP_CBAJ_G0012304.1 mouse_genomes_project 3 173298239 173298649 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062380.1 MGP_CBAJ_G0027354.1 mouse_genomes_project 3 110529048 110599515 - MGP_CBAJ_P0062380 Slc22a15 protein_coding protein_coding MGP_CBAJ_T0062381.1 MGP_CBAJ_G0027354.1 mouse_genomes_project 3 110534473 110599571 - MGP_CBAJ_P0062381 Slc22a15 protein_coding protein_coding MGP_CBAJ_T0062382.1 MGP_CBAJ_G0027354.1 mouse_genomes_project 3 110534497 110566030 - Slc22a15 protein_coding processed_transcript MGP_CBAJ_T0062383.1 MGP_CBAJ_G0027354.1 mouse_genomes_project 3 110538041 110553439 - Slc22a15 protein_coding retained_intron MGP_CBAJ_T0062384.1 MGP_CBAJ_G0027354.1 mouse_genomes_project 3 110539279 110599501 - MGP_CBAJ_P0062384 Slc22a15 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062385.1 MGP_CBAJ_G0027354.1 mouse_genomes_project 3 110547192 110552166 - Slc22a15 protein_coding retained_intron MGP_CBAJ_T0062386.1 MGP_CBAJ_G0027354.1 mouse_genomes_project 3 110596126 110599575 - Slc22a15 protein_coding processed_transcript MGP_CBAJ_T0013836.1 MGP_CBAJ_G0011948.1 mouse_genomes_project 3 47836603 47837322 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013729.1 MGP_CBAJ_G0011841.1 mouse_genomes_project 3 7843922 7844054 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100452.1 MGP_CBAJ_G0038707.1 mouse_genomes_project 3 68502450 68502576 - Gm25222 snoRNA snoRNA MGP_CBAJ_T0001291.1 MGP_CBAJ_G0001218.1 mouse_genomes_project 3 138683052 138688364 - TEC TEC MGP_CBAJ_T0014116.1 MGP_CBAJ_G0012228.1 mouse_genomes_project 3 142214097 142214871 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010387.1 MGP_CBAJ_G0008525.1 mouse_genomes_project 3 41331748 41331822 + Gm23810 miRNA miRNA MGP_CBAJ_T0063592.1 MGP_CBAJ_G0027599.1 mouse_genomes_project 3 150931469 150947979 + MGP_CBAJ_P0063592 1110002E22Rik protein_coding protein_coding MGP_CBAJ_T0063593.1 MGP_CBAJ_G0027599.1 mouse_genomes_project 3 150938045 150943833 + 1110002E22Rik protein_coding processed_transcript MGP_CBAJ_T0060969.1 MGP_CBAJ_G0027030.1 mouse_genomes_project 3 89847069 90003586 - MGP_CBAJ_P0060969 D930015E06Rik protein_coding protein_coding MGP_CBAJ_T0060970.1 MGP_CBAJ_G0027030.1 mouse_genomes_project 3 89847623 90003548 - MGP_CBAJ_P0060970 D930015E06Rik protein_coding protein_coding MGP_CBAJ_T0060971.1 MGP_CBAJ_G0027030.1 mouse_genomes_project 3 89847623 90003586 - MGP_CBAJ_P0060971 D930015E06Rik protein_coding protein_coding MGP_CBAJ_T0060972.1 MGP_CBAJ_G0027030.1 mouse_genomes_project 3 89847624 89859075 - D930015E06Rik protein_coding processed_transcript MGP_CBAJ_T0060973.1 MGP_CBAJ_G0027030.1 mouse_genomes_project 3 89850195 89857445 - D930015E06Rik protein_coding retained_intron MGP_CBAJ_T0060974.1 MGP_CBAJ_G0027030.1 mouse_genomes_project 3 89850209 89859401 - D930015E06Rik protein_coding retained_intron MGP_CBAJ_T0060975.1 MGP_CBAJ_G0027030.1 mouse_genomes_project 3 89871215 89922351 - D930015E06Rik protein_coding processed_transcript MGP_CBAJ_T0060976.1 MGP_CBAJ_G0027030.1 mouse_genomes_project 3 89892291 89898101 - D930015E06Rik protein_coding processed_transcript MGP_CBAJ_T0060977.1 MGP_CBAJ_G0027030.1 mouse_genomes_project 3 89993742 90003539 - D930015E06Rik protein_coding retained_intron MGP_CBAJ_T0060978.1 MGP_CBAJ_G0027030.1 mouse_genomes_project 3 90000588 90003572 - D930015E06Rik protein_coding retained_intron MGP_CBAJ_T0060979.1 MGP_CBAJ_G0027030.1 mouse_genomes_project 3 90000786 90003545 - D930015E06Rik protein_coding retained_intron MGP_CBAJ_T0010407.1 MGP_CBAJ_G0008545.1 mouse_genomes_project 3 100849225 100849363 + Gm44353 miRNA miRNA MGP_CBAJ_T0010371.1 MGP_CBAJ_G0008509.1 mouse_genomes_project 3 307218 307410 + miRNA miRNA MGP_CBAJ_T0013715.1 MGP_CBAJ_G0011827.1 mouse_genomes_project 3 4579777 4579897 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004226.1 MGP_CBAJ_G0003706.1 mouse_genomes_project 3 105011898 105014169 - 4930442L01Rik antisense antisense MGP_CBAJ_T0014180.1 MGP_CBAJ_G0012292.1 mouse_genomes_project 3 166701047 166701525 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001151.1 MGP_CBAJ_G0001080.1 mouse_genomes_project 3 53599753 53602957 + TEC TEC MGP_CBAJ_T0098341.1 MGP_CBAJ_G0036607.1 mouse_genomes_project 3 110838196 110841673 + sense_intronic sense_intronic MGP_CBAJ_T0063566.1 MGP_CBAJ_G0027593.1 mouse_genomes_project 3 150710752 150715750 + MGP_CBAJ_P0063566 H2afz protein_coding protein_coding MGP_CBAJ_T0063567.1 MGP_CBAJ_G0027593.1 mouse_genomes_project 3 150710770 150715014 + H2afz protein_coding processed_transcript MGP_CBAJ_T0063568.1 MGP_CBAJ_G0027593.1 mouse_genomes_project 3 150710873 150715379 + MGP_CBAJ_P0063568 H2afz protein_coding nonsense_mediated_decay MGP_CBAJ_T0063569.1 MGP_CBAJ_G0027593.1 mouse_genomes_project 3 150710873 150715856 + MGP_CBAJ_P0063569 H2afz protein_coding protein_coding MGP_CBAJ_T0063570.1 MGP_CBAJ_G0027593.1 mouse_genomes_project 3 150713898 150715467 + H2afz protein_coding retained_intron MGP_CBAJ_T0063571.1 MGP_CBAJ_G0027593.1 mouse_genomes_project 3 150714044 150715318 + H2afz protein_coding retained_intron MGP_CBAJ_T0007623.1 MGP_CBAJ_G0006229.1 mouse_genomes_project 3 150860253 150876764 + Gm19708 lincRNA lincRNA MGP_CBAJ_T0007408.1 MGP_CBAJ_G0006065.1 mouse_genomes_project 3 38117476 38118843 + 4930594O21Rik lincRNA lincRNA MGP_CBAJ_T0007409.1 MGP_CBAJ_G0006065.1 mouse_genomes_project 3 38117486 38118393 + 4930594O21Rik lincRNA lincRNA MGP_CBAJ_T0011404.1 MGP_CBAJ_G0009542.1 mouse_genomes_project 3 17969429 17969741 + Gm22282 misc_RNA misc_RNA MGP_CBAJ_T0064068.1 MGP_CBAJ_G0027684.1 mouse_genomes_project 3 170220220 170229409 + Lrriq3 protein_coding retained_intron MGP_CBAJ_T0064069.1 MGP_CBAJ_G0027684.1 mouse_genomes_project 3 170220220 170320716 + MGP_CBAJ_P0064069 Lrriq3 protein_coding protein_coding MGP_CBAJ_T0064070.1 MGP_CBAJ_G0027684.1 mouse_genomes_project 3 170220324 170308834 + MGP_CBAJ_P0064070 Lrriq3 protein_coding protein_coding MGP_CBAJ_T0064071.1 MGP_CBAJ_G0027684.1 mouse_genomes_project 3 170220374 170264470 + MGP_CBAJ_P0064071 Lrriq3 protein_coding protein_coding MGP_CBAJ_T0014025.1 MGP_CBAJ_G0012137.1 mouse_genomes_project 3 109809106 109809542 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0060054.1 MGP_CBAJ_G0026838.1 mouse_genomes_project 3 33873861 33893091 + MGP_CBAJ_P0060054 Ttc14 protein_coding protein_coding MGP_CBAJ_T0060055.1 MGP_CBAJ_G0026838.1 mouse_genomes_project 3 33874204 33874901 + Ttc14 protein_coding retained_intron MGP_CBAJ_T0060056.1 MGP_CBAJ_G0026838.1 mouse_genomes_project 3 33874212 33879360 + Ttc14 protein_coding retained_intron MGP_CBAJ_T0060057.1 MGP_CBAJ_G0026838.1 mouse_genomes_project 3 33874220 33885836 + MGP_CBAJ_P0060057 Ttc14 protein_coding protein_coding MGP_CBAJ_T0060058.1 MGP_CBAJ_G0026838.1 mouse_genomes_project 3 33874220 33880767 + MGP_CBAJ_P0060058 Ttc14 protein_coding protein_coding MGP_CBAJ_T0060059.1 MGP_CBAJ_G0026838.1 mouse_genomes_project 3 33874239 33885688 + MGP_CBAJ_P0060059 Ttc14 protein_coding protein_coding MGP_CBAJ_T0060060.1 MGP_CBAJ_G0026838.1 mouse_genomes_project 3 33874242 33890527 + MGP_CBAJ_P0060060 Ttc14 protein_coding protein_coding MGP_CBAJ_T0060061.1 MGP_CBAJ_G0026838.1 mouse_genomes_project 3 33874242 33887913 + MGP_CBAJ_P0060061 Ttc14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060062.1 MGP_CBAJ_G0026838.1 mouse_genomes_project 3 33874280 33888179 + MGP_CBAJ_P0060062 Ttc14 protein_coding protein_coding MGP_CBAJ_T0060063.1 MGP_CBAJ_G0026838.1 mouse_genomes_project 3 33874292 33885286 + MGP_CBAJ_P0060063 Ttc14 protein_coding protein_coding MGP_CBAJ_T0060064.1 MGP_CBAJ_G0026838.1 mouse_genomes_project 3 33879062 33885820 + MGP_CBAJ_P0060064 Ttc14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060065.1 MGP_CBAJ_G0026838.1 mouse_genomes_project 3 33880372 33880948 + Ttc14 protein_coding retained_intron MGP_CBAJ_T0004139.1 MGP_CBAJ_G0003644.1 mouse_genomes_project 3 33056732 33123838 + 4930419G24Rik antisense antisense MGP_CBAJ_T0061619.1 MGP_CBAJ_G0027144.1 mouse_genomes_project 3 97139379 97140980 - MGP_CBAJ_P0061619 protein_coding protein_coding MGP_CBAJ_T0061620.1 MGP_CBAJ_G0027144.1 mouse_genomes_project 3 97139886 97140666 - MGP_CBAJ_P0061620 protein_coding protein_coding MGP_CBAJ_T0061621.1 MGP_CBAJ_G0027144.1 mouse_genomes_project 3 97140031 97140998 - protein_coding retained_intron MGP_CBAJ_T0061622.1 MGP_CBAJ_G0027144.1 mouse_genomes_project 3 97140031 97140999 - protein_coding retained_intron MGP_CBAJ_T0061623.1 MGP_CBAJ_G0027144.1 mouse_genomes_project 3 97140035 97140988 - protein_coding retained_intron MGP_CBAJ_T0061624.1 MGP_CBAJ_G0027144.1 mouse_genomes_project 3 97140035 97141013 - MGP_CBAJ_P0061624 protein_coding protein_coding MGP_CBAJ_T0061625.1 MGP_CBAJ_G0027144.1 mouse_genomes_project 3 97140035 97141016 - MGP_CBAJ_P0061625 protein_coding protein_coding MGP_CBAJ_T0061626.1 MGP_CBAJ_G0027144.1 mouse_genomes_project 3 97140191 97141011 - protein_coding retained_intron MGP_CBAJ_T0061627.1 MGP_CBAJ_G0027144.1 mouse_genomes_project 3 97140423 97141010 - protein_coding retained_intron MGP_CBAJ_T0060409.1 MGP_CBAJ_G0026898.1 mouse_genomes_project 3 55787626 55809030 + MGP_CBAJ_P0060409 Proser1 protein_coding protein_coding MGP_CBAJ_T0060410.1 MGP_CBAJ_G0026898.1 mouse_genomes_project 3 55787767 55788707 + Proser1 protein_coding retained_intron MGP_CBAJ_T0060411.1 MGP_CBAJ_G0026898.1 mouse_genomes_project 3 55787892 55798149 + Proser1 protein_coding retained_intron MGP_CBAJ_T0060412.1 MGP_CBAJ_G0026898.1 mouse_genomes_project 3 55805270 55807060 + Proser1 protein_coding retained_intron MGP_CBAJ_T0061717.1 MGP_CBAJ_G0027165.1 mouse_genomes_project 3 97546679 97548953 + MGP_CBAJ_P0061717 S100a4 protein_coding protein_coding MGP_CBAJ_T0061718.1 MGP_CBAJ_G0027165.1 mouse_genomes_project 3 97547818 97548741 + MGP_CBAJ_P0061718 S100a4 protein_coding protein_coding MGP_CBAJ_T0007401.1 MGP_CBAJ_G0006058.1 mouse_genomes_project 3 34961550 34974774 + Gm38509 lincRNA lincRNA MGP_CBAJ_T0004300.1 MGP_CBAJ_G0003752.1 mouse_genomes_project 3 150708763 150710553 - Gm43403 antisense antisense MGP_CBAJ_T0004301.1 MGP_CBAJ_G0003752.1 mouse_genomes_project 3 150709866 150710363 - Gm43403 antisense antisense MGP_CBAJ_T0063093.1 MGP_CBAJ_G0027507.1 mouse_genomes_project 3 132469868 132471252 - Slc44a3 protein_coding processed_transcript MGP_CBAJ_T0063094.1 MGP_CBAJ_G0027507.1 mouse_genomes_project 3 132469868 132551633 - MGP_CBAJ_P0063094 Slc44a3 protein_coding protein_coding MGP_CBAJ_T0063095.1 MGP_CBAJ_G0027507.1 mouse_genomes_project 3 132536301 132546336 - Slc44a3 protein_coding processed_transcript MGP_CBAJ_T0014122.1 MGP_CBAJ_G0012234.1 mouse_genomes_project 3 143553352 143553547 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013713.1 MGP_CBAJ_G0011825.1 mouse_genomes_project 3 3697483 3697742 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013916.1 MGP_CBAJ_G0012028.1 mouse_genomes_project 3 73457115 73458475 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001200.1 MGP_CBAJ_G0001127.1 mouse_genomes_project 3 71281839 71283679 + TEC TEC MGP_CBAJ_T0014187.1 MGP_CBAJ_G0012299.1 mouse_genomes_project 3 169161350 169161802 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100432.1 MGP_CBAJ_G0038687.1 mouse_genomes_project 3 12348666 12348791 - Gm23112 snoRNA snoRNA MGP_CBAJ_T0013827.1 MGP_CBAJ_G0011939.1 mouse_genomes_project 3 44217737 44221999 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010401.1 MGP_CBAJ_G0008539.1 mouse_genomes_project 3 95175479 95175561 - Mir1905 miRNA miRNA MGP_CBAJ_T0063918.1 MGP_CBAJ_G0027664.1 mouse_genomes_project 3 166992370 167018681 + MGP_CBAJ_P0063918 Fubp1 protein_coding protein_coding MGP_CBAJ_T0063919.1 MGP_CBAJ_G0027664.1 mouse_genomes_project 3 166992421 167002288 + MGP_CBAJ_P0063919 Fubp1 protein_coding protein_coding MGP_CBAJ_T0063920.1 MGP_CBAJ_G0027664.1 mouse_genomes_project 3 166992430 167014603 + MGP_CBAJ_P0063920 Fubp1 protein_coding protein_coding MGP_CBAJ_T0063921.1 MGP_CBAJ_G0027664.1 mouse_genomes_project 3 166992440 167006687 + MGP_CBAJ_P0063921 Fubp1 protein_coding protein_coding MGP_CBAJ_T0063922.1 MGP_CBAJ_G0027664.1 mouse_genomes_project 3 166992446 167014602 + MGP_CBAJ_P0063922 Fubp1 protein_coding protein_coding MGP_CBAJ_T0063923.1 MGP_CBAJ_G0027664.1 mouse_genomes_project 3 166992462 167001504 + MGP_CBAJ_P0063923 Fubp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063924.1 MGP_CBAJ_G0027664.1 mouse_genomes_project 3 166992467 167014602 + MGP_CBAJ_P0063924 Fubp1 protein_coding protein_coding MGP_CBAJ_T0063925.1 MGP_CBAJ_G0027664.1 mouse_genomes_project 3 166992467 167017620 + MGP_CBAJ_P0063925 Fubp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063926.1 MGP_CBAJ_G0027664.1 mouse_genomes_project 3 166992469 167018681 + MGP_CBAJ_P0063926 Fubp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063927.1 MGP_CBAJ_G0027664.1 mouse_genomes_project 3 166999207 167000287 + Fubp1 protein_coding retained_intron MGP_CBAJ_T0063928.1 MGP_CBAJ_G0027664.1 mouse_genomes_project 3 167003151 167005924 + MGP_CBAJ_P0063928 Fubp1 protein_coding protein_coding MGP_CBAJ_T0063929.1 MGP_CBAJ_G0027664.1 mouse_genomes_project 3 167003673 167004770 + Fubp1 protein_coding retained_intron MGP_CBAJ_T0063930.1 MGP_CBAJ_G0027664.1 mouse_genomes_project 3 167005087 167014603 + MGP_CBAJ_P0063930 Fubp1 protein_coding protein_coding MGP_CBAJ_T0063931.1 MGP_CBAJ_G0027664.1 mouse_genomes_project 3 167005100 167014620 + MGP_CBAJ_P0063931 Fubp1 protein_coding protein_coding MGP_CBAJ_T0063932.1 MGP_CBAJ_G0027664.1 mouse_genomes_project 3 167005110 167017686 + MGP_CBAJ_P0063932 Fubp1 protein_coding protein_coding MGP_CBAJ_T0063933.1 MGP_CBAJ_G0027664.1 mouse_genomes_project 3 167006548 167017250 + Fubp1 protein_coding retained_intron MGP_CBAJ_T0063934.1 MGP_CBAJ_G0027664.1 mouse_genomes_project 3 167007693 167010095 + Fubp1 protein_coding retained_intron MGP_CBAJ_T0063935.1 MGP_CBAJ_G0027664.1 mouse_genomes_project 3 167009128 167013130 + Fubp1 protein_coding retained_intron MGP_CBAJ_T0063936.1 MGP_CBAJ_G0027664.1 mouse_genomes_project 3 167009688 167014339 + Fubp1 protein_coding retained_intron MGP_CBAJ_T0001330.1 MGP_CBAJ_G0001256.1 mouse_genomes_project 3 155050671 155053290 + TEC TEC MGP_CBAJ_T0001353.1 MGP_CBAJ_G0001279.1 mouse_genomes_project 3 172027758 172029092 + TEC TEC MGP_CBAJ_T0101323.1 MGP_CBAJ_G0039421.1 mouse_genomes_project 3 158599557 158641025 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101324.1 MGP_CBAJ_G0039421.1 mouse_genomes_project 3 158618461 158647291 - transcribed_unprocessed_pseudogene retained_intron MGP_CBAJ_T0062165.1 MGP_CBAJ_G0027292.1 mouse_genomes_project 3 104270495 104273116 + MGP_CBAJ_P0062165 Hist2h2be protein_coding protein_coding MGP_CBAJ_T0064044.1 MGP_CBAJ_G0027680.1 mouse_genomes_project 3 169682113 169708267 + MGP_CBAJ_P0064044 Cryz protein_coding nonsense_mediated_decay MGP_CBAJ_T0064045.1 MGP_CBAJ_G0027680.1 mouse_genomes_project 3 169682113 169708267 + MGP_CBAJ_P0064045 Cryz protein_coding protein_coding MGP_CBAJ_T0064046.1 MGP_CBAJ_G0027680.1 mouse_genomes_project 3 169682113 169708265 + MGP_CBAJ_P0064046 Cryz protein_coding protein_coding MGP_CBAJ_T0064047.1 MGP_CBAJ_G0027680.1 mouse_genomes_project 3 169682546 169707252 + MGP_CBAJ_P0064047 Cryz protein_coding protein_coding MGP_CBAJ_T0064048.1 MGP_CBAJ_G0027680.1 mouse_genomes_project 3 169682599 169696648 + MGP_CBAJ_P0064048 Cryz protein_coding protein_coding MGP_CBAJ_T0064049.1 MGP_CBAJ_G0027680.1 mouse_genomes_project 3 169682624 169703692 + MGP_CBAJ_P0064049 Cryz protein_coding nonsense_mediated_decay MGP_CBAJ_T0064050.1 MGP_CBAJ_G0027680.1 mouse_genomes_project 3 169682754 169696530 + MGP_CBAJ_P0064050 Cryz protein_coding protein_coding MGP_CBAJ_T0064051.1 MGP_CBAJ_G0027680.1 mouse_genomes_project 3 169682804 169698944 + MGP_CBAJ_P0064051 Cryz protein_coding protein_coding MGP_CBAJ_T0064052.1 MGP_CBAJ_G0027680.1 mouse_genomes_project 3 169682840 169703592 + MGP_CBAJ_P0064052 Cryz protein_coding protein_coding MGP_CBAJ_T0064053.1 MGP_CBAJ_G0027680.1 mouse_genomes_project 3 169692924 169707255 + MGP_CBAJ_P0064053 Cryz protein_coding protein_coding MGP_CBAJ_T0064054.1 MGP_CBAJ_G0027680.1 mouse_genomes_project 3 169700977 169704453 + Cryz protein_coding retained_intron MGP_CBAJ_T0014150.1 MGP_CBAJ_G0012262.1 mouse_genomes_project 3 151542576 151543893 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100438.1 MGP_CBAJ_G0038693.1 mouse_genomes_project 3 34047546 34047678 - Gm23175 snoRNA snoRNA MGP_CBAJ_T0059668.1 MGP_CBAJ_G0026754.1 mouse_genomes_project 3 7817418 7821907 - MGP_CBAJ_P0059668 Fabp4 protein_coding protein_coding MGP_CBAJ_T0059669.1 MGP_CBAJ_G0026754.1 mouse_genomes_project 3 7817658 7821889 - Fabp4 protein_coding retained_intron MGP_CBAJ_T0062140.1 MGP_CBAJ_G0027285.1 mouse_genomes_project 3 104148506 104188020 + MGP_CBAJ_P0062140 Otud7b protein_coding protein_coding MGP_CBAJ_T0062141.1 MGP_CBAJ_G0027285.1 mouse_genomes_project 3 104148506 104190828 + MGP_CBAJ_P0062141 Otud7b protein_coding protein_coding MGP_CBAJ_T0062142.1 MGP_CBAJ_G0027285.1 mouse_genomes_project 3 104148506 104207751 + MGP_CBAJ_P0062142 Otud7b protein_coding protein_coding MGP_CBAJ_T0062143.1 MGP_CBAJ_G0027285.1 mouse_genomes_project 3 104148506 104207751 + MGP_CBAJ_P0062143 Otud7b protein_coding protein_coding MGP_CBAJ_T0062144.1 MGP_CBAJ_G0027285.1 mouse_genomes_project 3 104148525 104177553 + Otud7b protein_coding processed_transcript MGP_CBAJ_T0062145.1 MGP_CBAJ_G0027285.1 mouse_genomes_project 3 104148527 104188055 + Otud7b protein_coding processed_transcript MGP_CBAJ_T0062146.1 MGP_CBAJ_G0027285.1 mouse_genomes_project 3 104151055 104207751 + MGP_CBAJ_P0062146 Otud7b protein_coding protein_coding MGP_CBAJ_T0062147.1 MGP_CBAJ_G0027285.1 mouse_genomes_project 3 104197218 104199078 + Otud7b protein_coding processed_transcript MGP_CBAJ_T0001315.1 MGP_CBAJ_G0001241.1 mouse_genomes_project 3 143746215 143749559 - TEC TEC MGP_CBAJ_T0010426.1 MGP_CBAJ_G0008564.1 mouse_genomes_project 3 139287856 139287925 + Mir302a miRNA miRNA MGP_CBAJ_T0001137.1 MGP_CBAJ_G0001066.1 mouse_genomes_project 3 49807632 49807741 + TEC TEC MGP_CBAJ_T0061234.1 MGP_CBAJ_G0027086.1 mouse_genomes_project 3 95043598 95062292 - MGP_CBAJ_P0061234 Sema4a protein_coding protein_coding MGP_CBAJ_T0061235.1 MGP_CBAJ_G0027086.1 mouse_genomes_project 3 95043601 95048779 - Sema4a protein_coding retained_intron MGP_CBAJ_T0061236.1 MGP_CBAJ_G0027086.1 mouse_genomes_project 3 95043601 95056270 - Sema4a protein_coding retained_intron MGP_CBAJ_T0061237.1 MGP_CBAJ_G0027086.1 mouse_genomes_project 3 95043601 95057678 - Sema4a protein_coding retained_intron MGP_CBAJ_T0061238.1 MGP_CBAJ_G0027086.1 mouse_genomes_project 3 95057325 95059090 - MGP_CBAJ_P0061238 Sema4a protein_coding nonsense_mediated_decay MGP_CBAJ_T0061239.1 MGP_CBAJ_G0027086.1 mouse_genomes_project 3 95057674 95062789 - MGP_CBAJ_P0061239 Sema4a protein_coding nonsense_mediated_decay MGP_CBAJ_T0061240.1 MGP_CBAJ_G0027086.1 mouse_genomes_project 3 95057736 95066576 - MGP_CBAJ_P0061240 Sema4a protein_coding protein_coding MGP_CBAJ_T0061241.1 MGP_CBAJ_G0027086.1 mouse_genomes_project 3 95058207 95066505 - MGP_CBAJ_P0061241 Sema4a protein_coding nonsense_mediated_decay MGP_CBAJ_T0061242.1 MGP_CBAJ_G0027086.1 mouse_genomes_project 3 95058224 95066351 - MGP_CBAJ_P0061242 Sema4a protein_coding protein_coding MGP_CBAJ_T0061243.1 MGP_CBAJ_G0027086.1 mouse_genomes_project 3 95059502 95062780 - MGP_CBAJ_P0061243 Sema4a protein_coding protein_coding MGP_CBAJ_T0061244.1 MGP_CBAJ_G0027086.1 mouse_genomes_project 3 95060293 95062317 - Sema4a protein_coding retained_intron MGP_CBAJ_T0061245.1 MGP_CBAJ_G0027086.1 mouse_genomes_project 3 95060551 95063890 - MGP_CBAJ_P0061245 Sema4a protein_coding protein_coding MGP_CBAJ_T0061246.1 MGP_CBAJ_G0027086.1 mouse_genomes_project 3 95062239 95063911 - MGP_CBAJ_P0061246 Sema4a protein_coding protein_coding MGP_CBAJ_T0061247.1 MGP_CBAJ_G0027086.1 mouse_genomes_project 3 95063199 95063911 - Sema4a protein_coding processed_transcript MGP_CBAJ_T0060594.1 MGP_CBAJ_G0026938.1 mouse_genomes_project 3 62227313 62238614 - MGP_CBAJ_P0060594 P2ry12 protein_coding protein_coding MGP_CBAJ_T0060595.1 MGP_CBAJ_G0026938.1 mouse_genomes_project 3 62227400 62280271 - MGP_CBAJ_P0060595 P2ry12 protein_coding protein_coding MGP_CBAJ_T0060596.1 MGP_CBAJ_G0026938.1 mouse_genomes_project 3 62227401 62231301 - MGP_CBAJ_P0060596 P2ry12 protein_coding protein_coding MGP_CBAJ_T0060597.1 MGP_CBAJ_G0026938.1 mouse_genomes_project 3 62227402 62280311 - MGP_CBAJ_P0060597 P2ry12 protein_coding protein_coding MGP_CBAJ_T0060598.1 MGP_CBAJ_G0026938.1 mouse_genomes_project 3 62228946 62231242 - MGP_CBAJ_P0060598 P2ry12 protein_coding protein_coding MGP_CBAJ_T0001100.1 MGP_CBAJ_G0001029.1 mouse_genomes_project 3 32712164 32712477 - TEC TEC MGP_CBAJ_T0013781.1 MGP_CBAJ_G0011893.1 mouse_genomes_project 3 26629595 26629983 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0060581.1 MGP_CBAJ_G0026935.1 mouse_genomes_project 3 62117203 62134003 - MGP_CBAJ_P0060581 P2ry14 protein_coding protein_coding MGP_CBAJ_T0060582.1 MGP_CBAJ_G0026935.1 mouse_genomes_project 3 62117973 62156710 - MGP_CBAJ_P0060582 P2ry14 protein_coding protein_coding MGP_CBAJ_T0060583.1 MGP_CBAJ_G0026935.1 mouse_genomes_project 3 62117973 62133865 - MGP_CBAJ_P0060583 P2ry14 protein_coding protein_coding MGP_CBAJ_T0060584.1 MGP_CBAJ_G0026935.1 mouse_genomes_project 3 62117974 62133863 - MGP_CBAJ_P0060584 P2ry14 protein_coding protein_coding MGP_CBAJ_T0060585.1 MGP_CBAJ_G0026935.1 mouse_genomes_project 3 62118280 62134568 - MGP_CBAJ_P0060585 P2ry14 protein_coding protein_coding MGP_CBAJ_T0060586.1 MGP_CBAJ_G0026935.1 mouse_genomes_project 3 62119055 62134454 - MGP_CBAJ_P0060586 P2ry14 protein_coding protein_coding MGP_CBAJ_T0060587.1 MGP_CBAJ_G0026935.1 mouse_genomes_project 3 62119359 62134359 - MGP_CBAJ_P0060587 P2ry14 protein_coding protein_coding MGP_CBAJ_T0060588.1 MGP_CBAJ_G0026935.1 mouse_genomes_project 3 62119374 62135690 - MGP_CBAJ_P0060588 P2ry14 protein_coding protein_coding MGP_CBAJ_T0060589.1 MGP_CBAJ_G0026935.1 mouse_genomes_project 3 62149050 62156836 - P2ry14 protein_coding retained_intron MGP_CBAJ_T0099227.1 MGP_CBAJ_G0037482.1 mouse_genomes_project 3 160102382 160102535 - Gm25627 snRNA snRNA MGP_CBAJ_T0101867.1 MGP_CBAJ_G0039898.1 mouse_genomes_project 3 107252294 107254232 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0060828.1 MGP_CBAJ_G0026995.1 mouse_genomes_project 3 79899224 80024494 - MGP_CBAJ_P0060828 Zbbx protein_coding protein_coding MGP_CBAJ_T0060829.1 MGP_CBAJ_G0026995.1 mouse_genomes_project 3 79899224 80024536 - MGP_CBAJ_P0060829 Zbbx protein_coding protein_coding MGP_CBAJ_T0060830.1 MGP_CBAJ_G0026995.1 mouse_genomes_project 3 79909340 80024467 - MGP_CBAJ_P0060830 Zbbx protein_coding protein_coding MGP_CBAJ_T0060831.1 MGP_CBAJ_G0026995.1 mouse_genomes_project 3 79941631 80024536 - MGP_CBAJ_P0060831 Zbbx protein_coding protein_coding MGP_CBAJ_T0060832.1 MGP_CBAJ_G0026995.1 mouse_genomes_project 3 79986852 80045902 - MGP_CBAJ_P0060832 Zbbx protein_coding protein_coding MGP_CBAJ_T0062573.1 MGP_CBAJ_G0027389.1 mouse_genomes_project 3 113868473 113909443 - MGP_CBAJ_P0062573 protein_coding unknown_likely_coding MGP_CBAJ_T0062574.1 MGP_CBAJ_G0027389.1 mouse_genomes_project 3 113879004 113909465 - MGP_CBAJ_P0062574 protein_coding protein_coding MGP_CBAJ_T0062575.1 MGP_CBAJ_G0027389.1 mouse_genomes_project 3 113884663 113887531 - protein_coding retained_intron MGP_CBAJ_T0062576.1 MGP_CBAJ_G0027389.1 mouse_genomes_project 3 113886856 113909438 - protein_coding retained_intron MGP_CBAJ_T0063585.1 MGP_CBAJ_G0027597.1 mouse_genomes_project 3 150783513 150809449 - Dapp1 protein_coding processed_transcript MGP_CBAJ_T0063586.1 MGP_CBAJ_G0027597.1 mouse_genomes_project 3 150783816 150808293 - Dapp1 protein_coding processed_transcript MGP_CBAJ_T0063587.1 MGP_CBAJ_G0027597.1 mouse_genomes_project 3 150783927 150838460 - Dapp1 protein_coding processed_transcript MGP_CBAJ_T0063588.1 MGP_CBAJ_G0027597.1 mouse_genomes_project 3 150783944 150838388 - MGP_CBAJ_P0063588 Dapp1 protein_coding protein_coding MGP_CBAJ_T0063589.1 MGP_CBAJ_G0027597.1 mouse_genomes_project 3 150803310 150808293 - Dapp1 protein_coding processed_transcript MGP_CBAJ_T0063590.1 MGP_CBAJ_G0027597.1 mouse_genomes_project 3 150837634 150838466 - Dapp1 protein_coding retained_intron MGP_CBAJ_T0063389.1 MGP_CBAJ_G0027559.1 mouse_genomes_project 3 142843567 142847074 - MGP_CBAJ_P0063389 Rpl34 protein_coding protein_coding MGP_CBAJ_T0063390.1 MGP_CBAJ_G0027559.1 mouse_genomes_project 3 142843570 142844143 - Rpl34 protein_coding retained_intron MGP_CBAJ_T0063391.1 MGP_CBAJ_G0027559.1 mouse_genomes_project 3 142843575 142847135 - MGP_CBAJ_P0063391 Rpl34 protein_coding protein_coding MGP_CBAJ_T0063392.1 MGP_CBAJ_G0027559.1 mouse_genomes_project 3 142843600 142847079 - Rpl34 protein_coding retained_intron MGP_CBAJ_T0063393.1 MGP_CBAJ_G0027559.1 mouse_genomes_project 3 142843612 142847058 - MGP_CBAJ_P0063393 Rpl34 protein_coding protein_coding MGP_CBAJ_T0063394.1 MGP_CBAJ_G0027559.1 mouse_genomes_project 3 142845068 142847071 - MGP_CBAJ_P0063394 Rpl34 protein_coding protein_coding MGP_CBAJ_T0063395.1 MGP_CBAJ_G0027559.1 mouse_genomes_project 3 142845303 142847084 - Rpl34 protein_coding retained_intron MGP_CBAJ_T0063396.1 MGP_CBAJ_G0027559.1 mouse_genomes_project 3 142845574 142847083 - MGP_CBAJ_P0063396 Rpl34 protein_coding protein_coding MGP_CBAJ_T0007421.1 MGP_CBAJ_G0006074.1 mouse_genomes_project 3 41953385 41963002 - Gm42784 lincRNA lincRNA MGP_CBAJ_T0007591.1 MGP_CBAJ_G0006200.1 mouse_genomes_project 3 139647218 139650895 + Gm42586 lincRNA lincRNA MGP_CBAJ_T0059940.1 MGP_CBAJ_G0026817.1 mouse_genomes_project 3 30421631 30445031 - MGP_CBAJ_P0059940 Lrrc31 protein_coding protein_coding MGP_CBAJ_T0059941.1 MGP_CBAJ_G0026817.1 mouse_genomes_project 3 30425372 30445044 - MGP_CBAJ_P0059941 Lrrc31 protein_coding protein_coding MGP_CBAJ_T0059942.1 MGP_CBAJ_G0026817.1 mouse_genomes_project 3 30443142 30444969 - Lrrc31 protein_coding retained_intron MGP_CBAJ_T0059943.1 MGP_CBAJ_G0026817.1 mouse_genomes_project 3 30443317 30445011 - Lrrc31 protein_coding processed_transcript MGP_CBAJ_T0010383.1 MGP_CBAJ_G0008521.1 mouse_genomes_project 3 35126370 35126477 - Mir6378 miRNA miRNA MGP_CBAJ_T0014095.1 MGP_CBAJ_G0012207.1 mouse_genomes_project 3 133284407 133284819 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013832.1 MGP_CBAJ_G0011944.1 mouse_genomes_project 3 45920248 45920636 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061592.1 MGP_CBAJ_G0027141.1 mouse_genomes_project 3 96951230 96962148 + MGP_CBAJ_P0061592 4933434E20Rik protein_coding protein_coding MGP_CBAJ_T0061593.1 MGP_CBAJ_G0027141.1 mouse_genomes_project 3 96952408 96963471 + MGP_CBAJ_P0061593 4933434E20Rik protein_coding protein_coding MGP_CBAJ_T0061594.1 MGP_CBAJ_G0027141.1 mouse_genomes_project 3 96952423 96958781 + 4933434E20Rik protein_coding processed_transcript MGP_CBAJ_T0061595.1 MGP_CBAJ_G0027141.1 mouse_genomes_project 3 96952431 96959227 + MGP_CBAJ_P0061595 4933434E20Rik protein_coding protein_coding MGP_CBAJ_T0061596.1 MGP_CBAJ_G0027141.1 mouse_genomes_project 3 96952436 96961124 + MGP_CBAJ_P0061596 4933434E20Rik protein_coding protein_coding MGP_CBAJ_T0061597.1 MGP_CBAJ_G0027141.1 mouse_genomes_project 3 96952448 96953281 + 4933434E20Rik protein_coding retained_intron MGP_CBAJ_T0061598.1 MGP_CBAJ_G0027141.1 mouse_genomes_project 3 96952465 96962572 + MGP_CBAJ_P0061598 4933434E20Rik protein_coding protein_coding MGP_CBAJ_T0061599.1 MGP_CBAJ_G0027141.1 mouse_genomes_project 3 96952465 96962575 + MGP_CBAJ_P0061599 4933434E20Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0061600.1 MGP_CBAJ_G0027141.1 mouse_genomes_project 3 96953181 96958997 + 4933434E20Rik protein_coding retained_intron MGP_CBAJ_T0061601.1 MGP_CBAJ_G0027141.1 mouse_genomes_project 3 96958774 96962426 + 4933434E20Rik protein_coding retained_intron MGP_CBAJ_T0061602.1 MGP_CBAJ_G0027141.1 mouse_genomes_project 3 96962925 96968473 + MGP_CBAJ_P0061602 4933434E20Rik protein_coding protein_coding MGP_CBAJ_T0014179.1 MGP_CBAJ_G0012291.1 mouse_genomes_project 3 163512497 163512956 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061445.1 MGP_CBAJ_G0027115.1 mouse_genomes_project 3 96012317 96013545 + Krtcap2 protein_coding retained_intron MGP_CBAJ_T0061446.1 MGP_CBAJ_G0027115.1 mouse_genomes_project 3 96012317 96016258 + MGP_CBAJ_P0061446 Krtcap2 protein_coding protein_coding MGP_CBAJ_T0061447.1 MGP_CBAJ_G0027115.1 mouse_genomes_project 3 96012785 96016061 + MGP_CBAJ_P0061447 Krtcap2 protein_coding protein_coding MGP_CBAJ_T0061448.1 MGP_CBAJ_G0027115.1 mouse_genomes_project 3 96015214 96016074 + Krtcap2 protein_coding retained_intron MGP_CBAJ_T0010411.1 MGP_CBAJ_G0008549.1 mouse_genomes_project 3 103717447 103717510 - Mir7014 miRNA miRNA MGP_CBAJ_T0063576.1 MGP_CBAJ_G0027595.1 mouse_genomes_project 3 150769304 150779041 + MGP_CBAJ_P0063576 Lamtor3 protein_coding protein_coding MGP_CBAJ_T0063577.1 MGP_CBAJ_G0027595.1 mouse_genomes_project 3 150769324 150770313 + Lamtor3 protein_coding retained_intron MGP_CBAJ_T0063578.1 MGP_CBAJ_G0027595.1 mouse_genomes_project 3 150769324 150779584 + MGP_CBAJ_P0063578 Lamtor3 protein_coding protein_coding MGP_CBAJ_T0063579.1 MGP_CBAJ_G0027595.1 mouse_genomes_project 3 150769360 150779062 + Lamtor3 protein_coding processed_transcript MGP_CBAJ_T0063580.1 MGP_CBAJ_G0027595.1 mouse_genomes_project 3 150769370 150777638 + MGP_CBAJ_P0063580 Lamtor3 protein_coding protein_coding MGP_CBAJ_T0063581.1 MGP_CBAJ_G0027595.1 mouse_genomes_project 3 150769642 150777923 + Lamtor3 protein_coding retained_intron MGP_CBAJ_T0063582.1 MGP_CBAJ_G0027595.1 mouse_genomes_project 3 150775620 150778977 + Lamtor3 protein_coding retained_intron MGP_CBAJ_T0063583.1 MGP_CBAJ_G0027595.1 mouse_genomes_project 3 150777000 150779718 + Lamtor3 protein_coding retained_intron MGP_CBAJ_T0014149.1 MGP_CBAJ_G0012261.1 mouse_genomes_project 3 151521224 151521999 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001140.1 MGP_CBAJ_G0001069.1 mouse_genomes_project 3 52632433 52633765 - TEC TEC MGP_CBAJ_T0007406.1 MGP_CBAJ_G0006063.1 mouse_genomes_project 3 36935288 36944143 - Gm11549 lincRNA lincRNA MGP_CBAJ_T0101858.1 MGP_CBAJ_G0039889.1 mouse_genomes_project 3 95088445 95089016 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0060580.1 MGP_CBAJ_G0026934.1 mouse_genomes_project 3 62094364 62099742 - MGP_CBAJ_P0060580 Gpr171 protein_coding protein_coding MGP_CBAJ_T0061665.1 MGP_CBAJ_G0027153.1 mouse_genomes_project 3 97331796 97373570 - MGP_CBAJ_P0061665 Ints3 protein_coding protein_coding MGP_CBAJ_T0061666.1 MGP_CBAJ_G0027153.1 mouse_genomes_project 3 97331804 97373796 - MGP_CBAJ_P0061666 Ints3 protein_coding protein_coding MGP_CBAJ_T0061667.1 MGP_CBAJ_G0027153.1 mouse_genomes_project 3 97332484 97343623 - Ints3 protein_coding retained_intron MGP_CBAJ_T0061668.1 MGP_CBAJ_G0027153.1 mouse_genomes_project 3 97332484 97373880 - MGP_CBAJ_P0061668 Ints3 protein_coding protein_coding MGP_CBAJ_T0061669.1 MGP_CBAJ_G0027153.1 mouse_genomes_project 3 97334775 97341184 - Ints3 protein_coding retained_intron MGP_CBAJ_T0061670.1 MGP_CBAJ_G0027153.1 mouse_genomes_project 3 97341513 97343083 - Ints3 protein_coding retained_intron MGP_CBAJ_T0061671.1 MGP_CBAJ_G0027153.1 mouse_genomes_project 3 97348315 97373889 - Ints3 protein_coding retained_intron MGP_CBAJ_T0014012.1 MGP_CBAJ_G0012124.1 mouse_genomes_project 3 106515020 106516157 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001208.1 MGP_CBAJ_G0001135.1 mouse_genomes_project 3 80926862 80929039 + TEC TEC MGP_CBAJ_T0007621.1 MGP_CBAJ_G0006227.1 mouse_genomes_project 3 150624780 150632794 - Gm31678 lincRNA lincRNA MGP_CBAJ_T0062748.1 MGP_CBAJ_G0027436.1 mouse_genomes_project 3 117407148 117412035 - MGP_CBAJ_P0062748 Gstm6 protein_coding protein_coding MGP_CBAJ_T0062749.1 MGP_CBAJ_G0027436.1 mouse_genomes_project 3 117407406 117411684 - MGP_CBAJ_P0062749 Gstm6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062750.1 MGP_CBAJ_G0027436.1 mouse_genomes_project 3 117407527 117411934 - MGP_CBAJ_P0062750 Gstm6 protein_coding protein_coding MGP_CBAJ_T0062751.1 MGP_CBAJ_G0027436.1 mouse_genomes_project 3 117410118 117412016 - Gstm6 protein_coding processed_transcript MGP_CBAJ_T0010415.1 MGP_CBAJ_G0008553.1 mouse_genomes_project 3 112583745 112583831 - Gm25325 miRNA miRNA MGP_CBAJ_T0013914.1 MGP_CBAJ_G0012026.1 mouse_genomes_project 3 73325309 73325850 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017706.1 MGP_CBAJ_G0015250.1 mouse_genomes_project 3 88478590 88481473 - Gm29999 processed_transcript retained_intron MGP_CBAJ_T0017707.1 MGP_CBAJ_G0015250.1 mouse_genomes_project 3 88478736 88483093 - Gm29999 processed_transcript lincRNA MGP_CBAJ_T0063135.1 MGP_CBAJ_G0027515.1 mouse_genomes_project 3 133445505 133598447 + Bcar3 protein_coding retained_intron MGP_CBAJ_T0063136.1 MGP_CBAJ_G0027515.1 mouse_genomes_project 3 133591055 133598165 + Bcar3 protein_coding retained_intron MGP_CBAJ_T0063137.1 MGP_CBAJ_G0027515.1 mouse_genomes_project 3 133591076 133705293 + MGP_CBAJ_P0063137 Bcar3 protein_coding protein_coding MGP_CBAJ_T0063138.1 MGP_CBAJ_G0027515.1 mouse_genomes_project 3 133591121 133646636 + Bcar3 protein_coding processed_transcript MGP_CBAJ_T0063139.1 MGP_CBAJ_G0027515.1 mouse_genomes_project 3 133658757 133683476 + MGP_CBAJ_P0063139 Bcar3 protein_coding protein_coding MGP_CBAJ_T0063140.1 MGP_CBAJ_G0027515.1 mouse_genomes_project 3 133679702 133683477 + MGP_CBAJ_P0063140 Bcar3 protein_coding protein_coding MGP_CBAJ_T0063141.1 MGP_CBAJ_G0027515.1 mouse_genomes_project 3 133683091 133687769 + Bcar3 protein_coding retained_intron MGP_CBAJ_T0063142.1 MGP_CBAJ_G0027515.1 mouse_genomes_project 3 133686148 133687957 + MGP_CBAJ_P0063142 Bcar3 protein_coding protein_coding MGP_CBAJ_T0063143.1 MGP_CBAJ_G0027515.1 mouse_genomes_project 3 133687241 133698312 + MGP_CBAJ_P0063143 Bcar3 protein_coding protein_coding MGP_CBAJ_T0063144.1 MGP_CBAJ_G0027515.1 mouse_genomes_project 3 133699747 133700507 + Bcar3 protein_coding retained_intron MGP_CBAJ_T0001347.1 MGP_CBAJ_G0001273.1 mouse_genomes_project 3 168387616 168388527 - TEC TEC MGP_CBAJ_T0013943.1 MGP_CBAJ_G0012055.1 mouse_genomes_project 3 83267012 83267453 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098029.1 MGP_CBAJ_G0036302.1 mouse_genomes_project 3 1189351 1189470 + n-R5s194 rRNA rRNA MGP_CBAJ_T0062183.1 MGP_CBAJ_G0027301.1 mouse_genomes_project 3 104727952 104731091 + MGP_CBAJ_P0062183 Ankrd34a protein_coding protein_coding MGP_CBAJ_T0007557.1 MGP_CBAJ_G0006175.1 mouse_genomes_project 3 116425490 116435089 + A930002I21Rik lincRNA lincRNA MGP_CBAJ_T0007558.1 MGP_CBAJ_G0006175.1 mouse_genomes_project 3 116425492 116433908 + A930002I21Rik lincRNA lincRNA MGP_CBAJ_T0014094.1 MGP_CBAJ_G0012206.1 mouse_genomes_project 3 132949488 132949865 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007563.1 MGP_CBAJ_G0006180.1 mouse_genomes_project 3 118725479 118727306 - 4930408K08Rik lincRNA lincRNA MGP_CBAJ_T0014145.1 MGP_CBAJ_G0012257.1 mouse_genomes_project 3 150481862 150482586 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001329.1 MGP_CBAJ_G0001255.1 mouse_genomes_project 3 151947714 151949490 - TEC TEC MGP_CBAJ_T0014134.1 MGP_CBAJ_G0012246.1 mouse_genomes_project 3 147663775 147664364 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001159.1 MGP_CBAJ_G0001087.1 mouse_genomes_project 3 54015180 54016392 - TEC TEC MGP_CBAJ_T0013892.1 MGP_CBAJ_G0012004.1 mouse_genomes_project 3 67266683 67267334 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0059839.1 MGP_CBAJ_G0026799.1 mouse_genomes_project 3 26419207 26489223 - MGP_CBAJ_P0059839 Ect2 protein_coding protein_coding MGP_CBAJ_T0059840.1 MGP_CBAJ_G0026799.1 mouse_genomes_project 3 26419207 26489240 - MGP_CBAJ_P0059840 Ect2 protein_coding protein_coding MGP_CBAJ_T0059841.1 MGP_CBAJ_G0026799.1 mouse_genomes_project 3 26419208 26489216 - MGP_CBAJ_P0059841 Ect2 protein_coding protein_coding MGP_CBAJ_T0059842.1 MGP_CBAJ_G0026799.1 mouse_genomes_project 3 26419211 26489212 - MGP_CBAJ_P0059842 Ect2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059843.1 MGP_CBAJ_G0026799.1 mouse_genomes_project 3 26420291 26444636 - MGP_CBAJ_P0059843 Ect2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059844.1 MGP_CBAJ_G0026799.1 mouse_genomes_project 3 26444680 26451474 - Ect2 protein_coding retained_intron MGP_CBAJ_T0059845.1 MGP_CBAJ_G0026799.1 mouse_genomes_project 3 26450659 26489174 - Ect2 protein_coding retained_intron MGP_CBAJ_T0059846.1 MGP_CBAJ_G0026799.1 mouse_genomes_project 3 26460212 26466545 - Ect2 protein_coding retained_intron MGP_CBAJ_T0059847.1 MGP_CBAJ_G0026799.1 mouse_genomes_project 3 26480102 26482367 - Ect2 protein_coding retained_intron MGP_CBAJ_T0059848.1 MGP_CBAJ_G0026799.1 mouse_genomes_project 3 26480172 26489216 - MGP_CBAJ_P0059848 Ect2 protein_coding protein_coding MGP_CBAJ_T0059849.1 MGP_CBAJ_G0026799.1 mouse_genomes_project 3 26481121 26489190 - MGP_CBAJ_P0059849 Ect2 protein_coding protein_coding MGP_CBAJ_T0059850.1 MGP_CBAJ_G0026799.1 mouse_genomes_project 3 26481137 26489172 - MGP_CBAJ_P0059850 Ect2 protein_coding protein_coding MGP_CBAJ_T0059851.1 MGP_CBAJ_G0026799.1 mouse_genomes_project 3 26481181 26489144 - MGP_CBAJ_P0059851 Ect2 protein_coding protein_coding MGP_CBAJ_T0001168.1 MGP_CBAJ_G0001095.1 mouse_genomes_project 3 54243044 54244843 - TEC TEC MGP_CBAJ_T0063101.1 MGP_CBAJ_G0027510.1 mouse_genomes_project 3 132811661 132877397 - MGP_CBAJ_P0063101 Abcd3 protein_coding protein_coding MGP_CBAJ_T0063102.1 MGP_CBAJ_G0027510.1 mouse_genomes_project 3 132811794 132877533 - MGP_CBAJ_P0063102 Abcd3 protein_coding protein_coding MGP_CBAJ_T0063103.1 MGP_CBAJ_G0027510.1 mouse_genomes_project 3 132812643 132877397 - MGP_CBAJ_P0063103 Abcd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063104.1 MGP_CBAJ_G0027510.1 mouse_genomes_project 3 132819041 132821600 - Abcd3 protein_coding retained_intron MGP_CBAJ_T0063105.1 MGP_CBAJ_G0027510.1 mouse_genomes_project 3 132838494 132877140 - Abcd3 protein_coding processed_transcript MGP_CBAJ_T0063106.1 MGP_CBAJ_G0027510.1 mouse_genomes_project 3 132855341 132877428 - Abcd3 protein_coding retained_intron MGP_CBAJ_T0007430.1 MGP_CBAJ_G0006079.1 mouse_genomes_project 3 42322553 42329734 - Gm43733 lincRNA lincRNA MGP_CBAJ_T0007431.1 MGP_CBAJ_G0006079.1 mouse_genomes_project 3 42323510 42329764 - Gm43733 lincRNA lincRNA MGP_CBAJ_T0007432.1 MGP_CBAJ_G0006079.1 mouse_genomes_project 3 42323593 42324524 - Gm43733 lincRNA lincRNA MGP_CBAJ_T0099159.1 MGP_CBAJ_G0037414.1 mouse_genomes_project 3 47129181 47129344 + Gm25796 snRNA snRNA MGP_CBAJ_T0061223.1 MGP_CBAJ_G0027084.1 mouse_genomes_project 3 94989525 95009125 - MGP_CBAJ_P0061223 Pmf1 protein_coding protein_coding MGP_CBAJ_T0061224.1 MGP_CBAJ_G0027084.1 mouse_genomes_project 3 94989525 95009120 - MGP_CBAJ_P0061224 Pmf1 protein_coding protein_coding MGP_CBAJ_T0061225.1 MGP_CBAJ_G0027084.1 mouse_genomes_project 3 94989761 95009059 - Pmf1 protein_coding processed_transcript MGP_CBAJ_T0061226.1 MGP_CBAJ_G0027084.1 mouse_genomes_project 3 94991125 94992103 - Pmf1 protein_coding retained_intron MGP_CBAJ_T0061227.1 MGP_CBAJ_G0027084.1 mouse_genomes_project 3 94991450 95009080 - MGP_CBAJ_P0061227 Pmf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061228.1 MGP_CBAJ_G0027084.1 mouse_genomes_project 3 94992747 94994809 - Pmf1 protein_coding retained_intron MGP_CBAJ_T0061229.1 MGP_CBAJ_G0027084.1 mouse_genomes_project 3 94994631 95009102 - Pmf1 protein_coding retained_intron MGP_CBAJ_T0098339.1 MGP_CBAJ_G0036605.1 mouse_genomes_project 3 110205534 110206286 - Gm42937 sense_intronic sense_intronic MGP_CBAJ_T0014160.1 MGP_CBAJ_G0012272.1 mouse_genomes_project 3 154122631 154122995 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100501.1 MGP_CBAJ_G0038756.1 mouse_genomes_project 3 168850377 168850502 + Gm24395 snoRNA snoRNA MGP_CBAJ_T0014193.1 MGP_CBAJ_G0012305.1 mouse_genomes_project 3 174441598 174442595 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063822.1 MGP_CBAJ_G0027648.1 mouse_genomes_project 3 160507485 160521594 - MGP_CBAJ_P0063822 Spata1 protein_coding protein_coding MGP_CBAJ_T0063823.1 MGP_CBAJ_G0027648.1 mouse_genomes_project 3 160507491 160547531 - MGP_CBAJ_P0063823 Spata1 protein_coding protein_coding MGP_CBAJ_T0063824.1 MGP_CBAJ_G0027648.1 mouse_genomes_project 3 160507492 160553437 - MGP_CBAJ_P0063824 Spata1 protein_coding protein_coding MGP_CBAJ_T0063825.1 MGP_CBAJ_G0027648.1 mouse_genomes_project 3 160517809 160528061 - MGP_CBAJ_P0063825 Spata1 protein_coding protein_coding MGP_CBAJ_T0063826.1 MGP_CBAJ_G0027648.1 mouse_genomes_project 3 160521480 160534925 - Spata1 protein_coding processed_transcript MGP_CBAJ_T0063827.1 MGP_CBAJ_G0027648.1 mouse_genomes_project 3 160527184 160553393 - Spata1 protein_coding processed_transcript MGP_CBAJ_T0063828.1 MGP_CBAJ_G0027648.1 mouse_genomes_project 3 160536814 160548801 - MGP_CBAJ_P0063828 Spata1 protein_coding protein_coding MGP_CBAJ_T0064085.1 MGP_CBAJ_G0027687.1 mouse_genomes_project 3 172929327 173020940 + MGP_CBAJ_P0064085 Ptger3 protein_coding protein_coding MGP_CBAJ_T0064086.1 MGP_CBAJ_G0027687.1 mouse_genomes_project 3 172929335 172978250 + Ptger3 protein_coding retained_intron MGP_CBAJ_T0064087.1 MGP_CBAJ_G0027687.1 mouse_genomes_project 3 172929335 173019808 + MGP_CBAJ_P0064087 Ptger3 protein_coding protein_coding MGP_CBAJ_T0101869.1 MGP_CBAJ_G0039900.1 mouse_genomes_project 3 115513668 115543318 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0001126.1 MGP_CBAJ_G0001055.1 mouse_genomes_project 3 41776912 41777835 - TEC TEC MGP_CBAJ_T0014087.1 MGP_CBAJ_G0012199.1 mouse_genomes_project 3 130602709 130602883 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0059727.1 MGP_CBAJ_G0026772.1 mouse_genomes_project 3 13751522 13850761 - MGP_CBAJ_P0059727 protein_coding protein_coding MGP_CBAJ_T0059728.1 MGP_CBAJ_G0026772.1 mouse_genomes_project 3 13751522 13850859 - MGP_CBAJ_P0059728 protein_coding protein_coding MGP_CBAJ_T0062479.1 MGP_CBAJ_G0027370.1 mouse_genomes_project 3 112487881 112545630 + MGP_CBAJ_P0062479 Syt6 protein_coding protein_coding MGP_CBAJ_T0062480.1 MGP_CBAJ_G0027370.1 mouse_genomes_project 3 112487931 112549877 + MGP_CBAJ_P0062480 Syt6 protein_coding protein_coding MGP_CBAJ_T0062481.1 MGP_CBAJ_G0027370.1 mouse_genomes_project 3 112487932 112549877 + MGP_CBAJ_P0062481 Syt6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062482.1 MGP_CBAJ_G0027370.1 mouse_genomes_project 3 112487950 112547467 + MGP_CBAJ_P0062482 Syt6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062483.1 MGP_CBAJ_G0027370.1 mouse_genomes_project 3 112488028 112545611 + MGP_CBAJ_P0062483 Syt6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062484.1 MGP_CBAJ_G0027370.1 mouse_genomes_project 3 112488717 112499906 + MGP_CBAJ_P0062484 Syt6 protein_coding protein_coding MGP_CBAJ_T0062485.1 MGP_CBAJ_G0027370.1 mouse_genomes_project 3 112488762 112549876 + MGP_CBAJ_P0062485 Syt6 protein_coding protein_coding MGP_CBAJ_T0062486.1 MGP_CBAJ_G0027370.1 mouse_genomes_project 3 112488778 112560961 + MGP_CBAJ_P0062486 Syt6 protein_coding protein_coding MGP_CBAJ_T0062487.1 MGP_CBAJ_G0027370.1 mouse_genomes_project 3 112488778 112542259 + MGP_CBAJ_P0062487 Syt6 protein_coding protein_coding MGP_CBAJ_T0060798.1 MGP_CBAJ_G0026985.1 mouse_genomes_project 3 73030370 73097740 - MGP_CBAJ_P0060798 Kpna4 protein_coding protein_coding MGP_CBAJ_T0060799.1 MGP_CBAJ_G0026985.1 mouse_genomes_project 3 73035442 73097719 - MGP_CBAJ_P0060799 Kpna4 protein_coding protein_coding MGP_CBAJ_T0060800.1 MGP_CBAJ_G0026985.1 mouse_genomes_project 3 73060309 73097257 - MGP_CBAJ_P0060800 Kpna4 protein_coding protein_coding MGP_CBAJ_T0013852.1 MGP_CBAJ_G0011964.1 mouse_genomes_project 3 53456652 53457037 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0060637.1 MGP_CBAJ_G0026948.1 mouse_genomes_project 3 64638354 64645141 + MGP_CBAJ_P0060637 Rap2b protein_coding protein_coding MGP_CBAJ_T0060763.1 MGP_CBAJ_G0026979.1 mouse_genomes_project 3 72637425 72645329 + MGP_CBAJ_P0060763 Il12a protein_coding protein_coding MGP_CBAJ_T0060764.1 MGP_CBAJ_G0026979.1 mouse_genomes_project 3 72638205 72645325 + MGP_CBAJ_P0060764 Il12a protein_coding protein_coding MGP_CBAJ_T0060765.1 MGP_CBAJ_G0026979.1 mouse_genomes_project 3 72638308 72644873 + Il12a protein_coding retained_intron MGP_CBAJ_T0060766.1 MGP_CBAJ_G0026979.1 mouse_genomes_project 3 72640774 72644805 + Il12a protein_coding retained_intron MGP_CBAJ_T0060767.1 MGP_CBAJ_G0026979.1 mouse_genomes_project 3 72640802 72645327 + Il12a protein_coding retained_intron MGP_CBAJ_T0060768.1 MGP_CBAJ_G0026979.1 mouse_genomes_project 3 72640802 72645329 + Il12a protein_coding retained_intron MGP_CBAJ_T0004166.1 MGP_CBAJ_G0003664.1 mouse_genomes_project 3 58515164 58555800 + Gm43376 antisense antisense MGP_CBAJ_T0004167.1 MGP_CBAJ_G0003664.1 mouse_genomes_project 3 58515235 58517122 + Gm43376 antisense antisense MGP_CBAJ_T0010416.1 MGP_CBAJ_G0008554.1 mouse_genomes_project 3 118126695 118126769 - Gm22860 miRNA miRNA MGP_CBAJ_T0013780.1 MGP_CBAJ_G0011892.1 mouse_genomes_project 3 26360255 26361420 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014006.1 MGP_CBAJ_G0012118.1 mouse_genomes_project 3 104125947 104126133 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0062922.1 MGP_CBAJ_G0027474.1 mouse_genomes_project 3 123243477 123370949 - MGP_CBAJ_P0062922 protein_coding protein_coding MGP_CBAJ_T0007486.1 MGP_CBAJ_G0006122.1 mouse_genomes_project 3 86669595 86670418 + Gm42476 lincRNA lincRNA MGP_CBAJ_T0004123.1 MGP_CBAJ_G0003633.1 mouse_genomes_project 3 4805440 4905215 + Gm16685 antisense antisense MGP_CBAJ_T0099234.1 MGP_CBAJ_G0037489.1 mouse_genomes_project 3 172754165 172754272 - Gm23379 snRNA snRNA MGP_CBAJ_T0060678.1 MGP_CBAJ_G0026957.1 mouse_genomes_project 3 67436095 67493159 + MGP_CBAJ_P0060678 Gmps protein_coding unknown_likely_coding MGP_CBAJ_T0014086.1 MGP_CBAJ_G0012198.1 mouse_genomes_project 3 128542516 128542958 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062052.1 MGP_CBAJ_G0027272.1 mouse_genomes_project 3 103638282 103655174 - MGP_CBAJ_P0062052 Adamtsl4 protein_coding protein_coding MGP_CBAJ_T0062053.1 MGP_CBAJ_G0027272.1 mouse_genomes_project 3 103638285 103655115 - MGP_CBAJ_P0062053 Adamtsl4 protein_coding protein_coding MGP_CBAJ_T0062054.1 MGP_CBAJ_G0027272.1 mouse_genomes_project 3 103638831 103639233 - Adamtsl4 protein_coding processed_transcript MGP_CBAJ_T0062055.1 MGP_CBAJ_G0027272.1 mouse_genomes_project 3 103641106 103642178 - Adamtsl4 protein_coding processed_transcript MGP_CBAJ_T0062056.1 MGP_CBAJ_G0027272.1 mouse_genomes_project 3 103648254 103655122 - MGP_CBAJ_P0062056 Adamtsl4 protein_coding protein_coding MGP_CBAJ_T0060843.1 MGP_CBAJ_G0026999.1 mouse_genomes_project 3 80479165 80575491 + MGP_CBAJ_P0060843 Serpini1 protein_coding protein_coding MGP_CBAJ_T0060844.1 MGP_CBAJ_G0026999.1 mouse_genomes_project 3 80479165 80546451 + MGP_CBAJ_P0060844 Serpini1 protein_coding protein_coding MGP_CBAJ_T0060845.1 MGP_CBAJ_G0026999.1 mouse_genomes_project 3 80479179 80541490 + Serpini1 protein_coding processed_transcript MGP_CBAJ_T0060846.1 MGP_CBAJ_G0026999.1 mouse_genomes_project 3 80479196 80545943 + Serpini1 protein_coding retained_intron MGP_CBAJ_T0063156.1 MGP_CBAJ_G0027521.1 mouse_genomes_project 3 134158203 134220900 - MGP_CBAJ_P0063156 Usp53 protein_coding protein_coding MGP_CBAJ_T0063157.1 MGP_CBAJ_G0027521.1 mouse_genomes_project 3 134175478 134179785 - Usp53 protein_coding retained_intron MGP_CBAJ_T0063158.1 MGP_CBAJ_G0027521.1 mouse_genomes_project 3 134181454 134220713 - MGP_CBAJ_P0063158 Usp53 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063159.1 MGP_CBAJ_G0027521.1 mouse_genomes_project 3 134182784 134220896 - MGP_CBAJ_P0063159 Usp53 protein_coding protein_coding MGP_CBAJ_T0063160.1 MGP_CBAJ_G0027521.1 mouse_genomes_project 3 134185721 134220894 - MGP_CBAJ_P0063160 Usp53 protein_coding protein_coding MGP_CBAJ_T0063161.1 MGP_CBAJ_G0027521.1 mouse_genomes_project 3 134189528 134220900 - Usp53 protein_coding retained_intron MGP_CBAJ_T0063162.1 MGP_CBAJ_G0027521.1 mouse_genomes_project 3 134193075 134195478 - Usp53 protein_coding retained_intron MGP_CBAJ_T0063163.1 MGP_CBAJ_G0027521.1 mouse_genomes_project 3 134193118 134220861 - MGP_CBAJ_P0063163 Usp53 protein_coding protein_coding MGP_CBAJ_T0063164.1 MGP_CBAJ_G0027521.1 mouse_genomes_project 3 134193789 134197197 - Usp53 protein_coding retained_intron MGP_CBAJ_T0063165.1 MGP_CBAJ_G0027521.1 mouse_genomes_project 3 134203773 134220283 - Usp53 protein_coding retained_intron MGP_CBAJ_T0100498.1 MGP_CBAJ_G0038753.1 mouse_genomes_project 3 162580118 162580250 - Gm23131 snoRNA snoRNA MGP_CBAJ_T0007572.1 MGP_CBAJ_G0006188.1 mouse_genomes_project 3 127822442 127823131 + Gm42891 lincRNA lincRNA MGP_CBAJ_T0013909.1 MGP_CBAJ_G0012021.1 mouse_genomes_project 3 71583839 71585169 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101843.1 MGP_CBAJ_G0039874.1 mouse_genomes_project 3 62564205 62564442 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0060815.1 MGP_CBAJ_G0026990.1 mouse_genomes_project 3 73891730 73929891 - MGP_CBAJ_P0060815 Sptssb protein_coding protein_coding MGP_CBAJ_T0060816.1 MGP_CBAJ_G0026990.1 mouse_genomes_project 3 73892766 73929873 - MGP_CBAJ_P0060816 Sptssb protein_coding protein_coding MGP_CBAJ_T0017720.1 MGP_CBAJ_G0015257.1 mouse_genomes_project 3 112732531 112737855 + Gm15471 processed_transcript retained_intron MGP_CBAJ_T0017721.1 MGP_CBAJ_G0015257.1 mouse_genomes_project 3 112732538 112737856 + Gm15471 processed_transcript antisense MGP_CBAJ_T0061333.1 MGP_CBAJ_G0027100.1 mouse_genomes_project 3 95645201 95647110 - Dap3 protein_coding retained_intron MGP_CBAJ_T0061334.1 MGP_CBAJ_G0027100.1 mouse_genomes_project 3 95645201 95673857 - MGP_CBAJ_P0061334 Dap3 protein_coding protein_coding MGP_CBAJ_T0061335.1 MGP_CBAJ_G0027100.1 mouse_genomes_project 3 95645328 95652553 - MGP_CBAJ_P0061335 Dap3 protein_coding protein_coding MGP_CBAJ_T0061336.1 MGP_CBAJ_G0027100.1 mouse_genomes_project 3 95645364 95652586 - MGP_CBAJ_P0061336 Dap3 protein_coding protein_coding MGP_CBAJ_T0061337.1 MGP_CBAJ_G0027100.1 mouse_genomes_project 3 95645394 95673776 - MGP_CBAJ_P0061337 Dap3 protein_coding protein_coding MGP_CBAJ_T0061338.1 MGP_CBAJ_G0027100.1 mouse_genomes_project 3 95650041 95674204 - MGP_CBAJ_P0061338 Dap3 protein_coding protein_coding MGP_CBAJ_T0061339.1 MGP_CBAJ_G0027100.1 mouse_genomes_project 3 95650075 95678123 - MGP_CBAJ_P0061339 Dap3 protein_coding protein_coding MGP_CBAJ_T0061340.1 MGP_CBAJ_G0027100.1 mouse_genomes_project 3 95651010 95674177 - MGP_CBAJ_P0061340 Dap3 protein_coding protein_coding MGP_CBAJ_T0061341.1 MGP_CBAJ_G0027100.1 mouse_genomes_project 3 95651058 95673812 - MGP_CBAJ_P0061341 Dap3 protein_coding protein_coding MGP_CBAJ_T0061342.1 MGP_CBAJ_G0027100.1 mouse_genomes_project 3 95657501 95662420 - MGP_CBAJ_P0061342 Dap3 protein_coding protein_coding MGP_CBAJ_T0061343.1 MGP_CBAJ_G0027100.1 mouse_genomes_project 3 95672958 95678052 - Dap3 protein_coding processed_transcript MGP_CBAJ_T0061345.1 MGP_CBAJ_G0027100.1 mouse_genomes_project 3 95677658 95678124 - Dap3 protein_coding processed_transcript MGP_CBAJ_T0007499.1 MGP_CBAJ_G0006134.1 mouse_genomes_project 3 93505826 93510575 + Gm37855 lincRNA lincRNA MGP_CBAJ_T0062020.1 MGP_CBAJ_G0027265.1 mouse_genomes_project 3 103369283 103438472 + Arnt protein_coding retained_intron MGP_CBAJ_T0062021.1 MGP_CBAJ_G0027265.1 mouse_genomes_project 3 103369283 103442417 + MGP_CBAJ_P0062021 Arnt protein_coding protein_coding MGP_CBAJ_T0062022.1 MGP_CBAJ_G0027265.1 mouse_genomes_project 3 103369285 103444090 + MGP_CBAJ_P0062022 Arnt protein_coding protein_coding MGP_CBAJ_T0062023.1 MGP_CBAJ_G0027265.1 mouse_genomes_project 3 103369299 103444087 + MGP_CBAJ_P0062023 Arnt protein_coding protein_coding MGP_CBAJ_T0062024.1 MGP_CBAJ_G0027265.1 mouse_genomes_project 3 103369323 103402776 + MGP_CBAJ_P0062024 Arnt protein_coding protein_coding MGP_CBAJ_T0062025.1 MGP_CBAJ_G0027265.1 mouse_genomes_project 3 103369323 103442421 + MGP_CBAJ_P0062025 Arnt protein_coding protein_coding MGP_CBAJ_T0062026.1 MGP_CBAJ_G0027265.1 mouse_genomes_project 3 103369414 103439540 + Arnt protein_coding retained_intron MGP_CBAJ_T0062027.1 MGP_CBAJ_G0027265.1 mouse_genomes_project 3 103408193 103442417 + Arnt protein_coding retained_intron MGP_CBAJ_T0062028.1 MGP_CBAJ_G0027265.1 mouse_genomes_project 3 103415231 103425368 + Arnt protein_coding retained_intron MGP_CBAJ_T0062029.1 MGP_CBAJ_G0027265.1 mouse_genomes_project 3 103421236 103434161 + MGP_CBAJ_P0062029 Arnt protein_coding protein_coding MGP_CBAJ_T0062030.1 MGP_CBAJ_G0027265.1 mouse_genomes_project 3 103436254 103437256 + Arnt protein_coding retained_intron MGP_CBAJ_T0099200.1 MGP_CBAJ_G0037455.1 mouse_genomes_project 3 104473661 104473826 + Rnu1b1 snRNA snRNA MGP_CBAJ_T0007492.1 MGP_CBAJ_G0006127.1 mouse_genomes_project 3 88981719 88985689 - Gm10710 lincRNA lincRNA MGP_CBAJ_T0013890.1 MGP_CBAJ_G0012002.1 mouse_genomes_project 3 66087556 66088138 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007490.1 MGP_CBAJ_G0006126.1 mouse_genomes_project 3 88776622 88856599 - Gm30097 lincRNA lincRNA MGP_CBAJ_T0007491.1 MGP_CBAJ_G0006126.1 mouse_genomes_project 3 88776724 88843741 - Gm30097 lincRNA lincRNA MGP_CBAJ_T0007606.1 MGP_CBAJ_G0006213.1 mouse_genomes_project 3 144666643 144668309 - Gm42880 lincRNA lincRNA MGP_CBAJ_T0017697.1 MGP_CBAJ_G0015246.1 mouse_genomes_project 3 52571436 52664440 - Gm6209 processed_transcript lincRNA MGP_CBAJ_T0017698.1 MGP_CBAJ_G0015246.1 mouse_genomes_project 3 52636987 52641630 - Gm6209 processed_transcript retained_intron MGP_CBAJ_T0059680.1 MGP_CBAJ_G0026758.1 mouse_genomes_project 3 7957563 7961486 - MGP_CBAJ_P0059680 Slc10a5 protein_coding protein_coding MGP_CBAJ_T0007525.1 MGP_CBAJ_G0006148.1 mouse_genomes_project 3 104328256 104334343 + Gm42743 lincRNA lincRNA MGP_CBAJ_T0013710.1 MGP_CBAJ_G0011822.1 mouse_genomes_project 3 3189905 3190321 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062906.1 MGP_CBAJ_G0027472.1 mouse_genomes_project 3 119497672 119898873 - MGP_CBAJ_P0062906 Ntng1 protein_coding protein_coding MGP_CBAJ_T0062907.1 MGP_CBAJ_G0027472.1 mouse_genomes_project 3 119497675 119899470 - MGP_CBAJ_P0062907 Ntng1 protein_coding unknown_likely_coding MGP_CBAJ_T0062908.1 MGP_CBAJ_G0027472.1 mouse_genomes_project 3 119497678 119899880 - MGP_CBAJ_P0062908 Ntng1 protein_coding protein_coding MGP_CBAJ_T0062909.1 MGP_CBAJ_G0027472.1 mouse_genomes_project 3 119498747 119899344 - MGP_CBAJ_P0062909 Ntng1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062910.1 MGP_CBAJ_G0027472.1 mouse_genomes_project 3 119500314 119891404 - MGP_CBAJ_P0062910 Ntng1 protein_coding protein_coding MGP_CBAJ_T0062911.1 MGP_CBAJ_G0027472.1 mouse_genomes_project 3 119500314 119891404 - MGP_CBAJ_P0062911 Ntng1 protein_coding protein_coding MGP_CBAJ_T0062912.1 MGP_CBAJ_G0027472.1 mouse_genomes_project 3 119500314 119891404 - MGP_CBAJ_P0062912 Ntng1 protein_coding protein_coding MGP_CBAJ_T0062913.1 MGP_CBAJ_G0027472.1 mouse_genomes_project 3 119500314 119891404 - MGP_CBAJ_P0062913 Ntng1 protein_coding protein_coding MGP_CBAJ_T0062914.1 MGP_CBAJ_G0027472.1 mouse_genomes_project 3 119500314 119891404 - MGP_CBAJ_P0062914 Ntng1 protein_coding protein_coding MGP_CBAJ_T0062915.1 MGP_CBAJ_G0027472.1 mouse_genomes_project 3 119500314 119891404 - MGP_CBAJ_P0062915 Ntng1 protein_coding protein_coding MGP_CBAJ_T0062916.1 MGP_CBAJ_G0027472.1 mouse_genomes_project 3 119554328 119556640 - Ntng1 protein_coding retained_intron MGP_CBAJ_T0062917.1 MGP_CBAJ_G0027472.1 mouse_genomes_project 3 119554328 119891364 - Ntng1 protein_coding retained_intron MGP_CBAJ_T0062918.1 MGP_CBAJ_G0027472.1 mouse_genomes_project 3 119899553 119899880 - MGP_CBAJ_P0062918 Ntng1 protein_coding protein_coding MGP_CBAJ_T0100479.1 MGP_CBAJ_G0038734.1 mouse_genomes_project 3 117517191 117517322 + Gm25592 snoRNA snoRNA MGP_CBAJ_T0062795.1 MGP_CBAJ_G0027448.1 mouse_genomes_project 3 117718737 117733912 - MGP_CBAJ_P0062795 Sypl2 protein_coding protein_coding MGP_CBAJ_T0062796.1 MGP_CBAJ_G0027448.1 mouse_genomes_project 3 117724566 117733907 - Sypl2 protein_coding retained_intron MGP_CBAJ_T0061511.1 MGP_CBAJ_G0027129.1 mouse_genomes_project 3 96224675 96227205 + Pygo2 protein_coding processed_transcript MGP_CBAJ_T0061512.1 MGP_CBAJ_G0027129.1 mouse_genomes_project 3 96224722 96229590 + MGP_CBAJ_P0061512 Pygo2 protein_coding protein_coding MGP_CBAJ_T0061513.1 MGP_CBAJ_G0027129.1 mouse_genomes_project 3 96224885 96225631 + Pygo2 protein_coding processed_transcript MGP_CBAJ_T0061514.1 MGP_CBAJ_G0027129.1 mouse_genomes_project 3 96225201 96227144 + Pygo2 protein_coding processed_transcript MGP_CBAJ_T0061515.1 MGP_CBAJ_G0027129.1 mouse_genomes_project 3 96225298 96229590 + MGP_CBAJ_P0061515 Pygo2 protein_coding protein_coding MGP_CBAJ_T0061516.1 MGP_CBAJ_G0027129.1 mouse_genomes_project 3 96225493 96227454 + Pygo2 protein_coding processed_transcript MGP_CBAJ_T0060042.1 MGP_CBAJ_G0026837.1 mouse_genomes_project 3 32972120 33118313 - MGP_CBAJ_P0060042 Pex5l protein_coding protein_coding MGP_CBAJ_T0060043.1 MGP_CBAJ_G0026837.1 mouse_genomes_project 3 32972120 33117321 - MGP_CBAJ_P0060043 Pex5l protein_coding protein_coding MGP_CBAJ_T0060044.1 MGP_CBAJ_G0026837.1 mouse_genomes_project 3 32972120 33118313 - MGP_CBAJ_P0060044 Pex5l protein_coding protein_coding MGP_CBAJ_T0060045.1 MGP_CBAJ_G0026837.1 mouse_genomes_project 3 32972120 33118313 - MGP_CBAJ_P0060045 Pex5l protein_coding protein_coding MGP_CBAJ_T0060046.1 MGP_CBAJ_G0026837.1 mouse_genomes_project 3 32972120 33118313 - MGP_CBAJ_P0060046 Pex5l protein_coding protein_coding MGP_CBAJ_T0060047.1 MGP_CBAJ_G0026837.1 mouse_genomes_project 3 32972346 33118282 - MGP_CBAJ_P0060047 Pex5l protein_coding protein_coding MGP_CBAJ_T0060048.1 MGP_CBAJ_G0026837.1 mouse_genomes_project 3 32972666 33189301 - MGP_CBAJ_P0060048 Pex5l protein_coding protein_coding MGP_CBAJ_T0060049.1 MGP_CBAJ_G0026837.1 mouse_genomes_project 3 32972666 33118288 - MGP_CBAJ_P0060049 Pex5l protein_coding protein_coding MGP_CBAJ_T0060050.1 MGP_CBAJ_G0026837.1 mouse_genomes_project 3 32973342 33015622 - MGP_CBAJ_P0060050 Pex5l protein_coding protein_coding MGP_CBAJ_T0060051.1 MGP_CBAJ_G0026837.1 mouse_genomes_project 3 32977070 33189466 - Pex5l protein_coding retained_intron MGP_CBAJ_T0060052.1 MGP_CBAJ_G0026837.1 mouse_genomes_project 3 33172524 33189295 - Pex5l protein_coding processed_transcript MGP_CBAJ_T0060053.1 MGP_CBAJ_G0026837.1 mouse_genomes_project 3 33186178 33189402 - Pex5l protein_coding retained_intron MGP_CBAJ_T0099209.1 MGP_CBAJ_G0037464.1 mouse_genomes_project 3 113720538 113720628 + Gm24223 snRNA snRNA MGP_CBAJ_T0017731.1 MGP_CBAJ_G0015262.1 mouse_genomes_project 3 118775812 118778175 - Gm43223 processed_transcript lincRNA MGP_CBAJ_T0017732.1 MGP_CBAJ_G0015262.1 mouse_genomes_project 3 118775821 118777953 - Gm43223 processed_transcript processed_transcript MGP_CBAJ_T0013903.1 MGP_CBAJ_G0012015.1 mouse_genomes_project 3 69899117 69899270 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013844.1 MGP_CBAJ_G0011956.1 mouse_genomes_project 3 51453321 51453883 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098381.1 MGP_CBAJ_G0036647.1 mouse_genomes_project 3 168199295 168201438 - 1700012D16Rik sense_intronic sense_intronic MGP_CBAJ_T0101866.1 MGP_CBAJ_G0039897.1 mouse_genomes_project 3 107084820 107095477 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013714.1 MGP_CBAJ_G0011826.1 mouse_genomes_project 3 3821891 3822237 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062888.1 MGP_CBAJ_G0027467.1 mouse_genomes_project 3 118557895 118558288 - MGP_CBAJ_P0062888 Gm9857 protein_coding protein_coding MGP_CBAJ_T0061166.1 MGP_CBAJ_G0027072.1 mouse_genomes_project 3 94538880 94540856 - MGP_CBAJ_P0061166 Apoa1bp protein_coding protein_coding MGP_CBAJ_T0061859.1 MGP_CBAJ_G0027239.1 mouse_genomes_project 3 102520040 102549317 - MGP_CBAJ_P0061859 Cgn protein_coding protein_coding MGP_CBAJ_T0061860.1 MGP_CBAJ_G0027239.1 mouse_genomes_project 3 102520040 102549288 - MGP_CBAJ_P0061860 Cgn protein_coding protein_coding MGP_CBAJ_T0061861.1 MGP_CBAJ_G0027239.1 mouse_genomes_project 3 102538044 102549292 - MGP_CBAJ_P0061861 Cgn protein_coding protein_coding MGP_CBAJ_T0061862.1 MGP_CBAJ_G0027239.1 mouse_genomes_project 3 102538044 102549276 - MGP_CBAJ_P0061862 Cgn protein_coding protein_coding MGP_CBAJ_T0099207.1 MGP_CBAJ_G0037462.1 mouse_genomes_project 3 113040945 113041047 + Gm23830 snRNA snRNA MGP_CBAJ_T0013821.1 MGP_CBAJ_G0011933.1 mouse_genomes_project 3 41563755 41564026 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062887.1 MGP_CBAJ_G0027466.1 mouse_genomes_project 3 118557715 118558287 + protein_coding processed_transcript MGP_CBAJ_T0062889.1 MGP_CBAJ_G0027466.1 mouse_genomes_project 3 118557901 118563729 + MGP_CBAJ_P0062889 protein_coding protein_coding MGP_CBAJ_T0062890.1 MGP_CBAJ_G0027466.1 mouse_genomes_project 3 118557926 118577677 + MGP_CBAJ_P0062890 protein_coding protein_coding MGP_CBAJ_T0062891.1 MGP_CBAJ_G0027466.1 mouse_genomes_project 3 118557956 118576322 + MGP_CBAJ_P0062891 protein_coding protein_coding MGP_CBAJ_T0062892.1 MGP_CBAJ_G0027466.1 mouse_genomes_project 3 118561495 118577775 + MGP_CBAJ_P0062892 protein_coding protein_coding MGP_CBAJ_T0062893.1 MGP_CBAJ_G0027466.1 mouse_genomes_project 3 118562306 118577689 + MGP_CBAJ_P0062893 protein_coding protein_coding MGP_CBAJ_T0101853.1 MGP_CBAJ_G0039884.1 mouse_genomes_project 3 86636097 86636565 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0014064.1 MGP_CBAJ_G0012176.1 mouse_genomes_project 3 121703173 121703567 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004243.1 MGP_CBAJ_G0003717.1 mouse_genomes_project 3 113391459 113402799 + Gm43257 antisense antisense MGP_CBAJ_T0001260.1 MGP_CBAJ_G0001187.1 mouse_genomes_project 3 129627937 129630171 + TEC TEC MGP_CBAJ_T0062120.1 MGP_CBAJ_G0027281.1 mouse_genomes_project 3 103899991 103906917 - MGP_CBAJ_P0062120 Car14 protein_coding protein_coding MGP_CBAJ_T0062121.1 MGP_CBAJ_G0027281.1 mouse_genomes_project 3 103901963 103906911 - MGP_CBAJ_P0062121 Car14 protein_coding protein_coding MGP_CBAJ_T0062122.1 MGP_CBAJ_G0027281.1 mouse_genomes_project 3 103903735 103906910 - Car14 protein_coding retained_intron MGP_CBAJ_T0062123.1 MGP_CBAJ_G0027281.1 mouse_genomes_project 3 103904116 103905974 - Car14 protein_coding retained_intron MGP_CBAJ_T0063802.1 MGP_CBAJ_G0027643.1 mouse_genomes_project 3 160103731 160114114 + MGP_CBAJ_P0063802 Mcoln3 protein_coding protein_coding MGP_CBAJ_T0063803.1 MGP_CBAJ_G0027643.1 mouse_genomes_project 3 160107922 160131854 + MGP_CBAJ_P0063803 Mcoln3 protein_coding protein_coding MGP_CBAJ_T0063804.1 MGP_CBAJ_G0027643.1 mouse_genomes_project 3 160129127 160130711 + Mcoln3 protein_coding retained_intron MGP_CBAJ_T0062264.1 MGP_CBAJ_G0027319.1 mouse_genomes_project 3 105634092 105635055 - MGP_CBAJ_P0062264 Olfr1402 protein_coding protein_coding MGP_CBAJ_T0099198.1 MGP_CBAJ_G0037453.1 mouse_genomes_project 3 103781105 103781291 - Gm26361 snRNA snRNA MGP_CBAJ_T0007596.1 MGP_CBAJ_G0006205.1 mouse_genomes_project 3 140975819 140978559 - Gm28543 lincRNA lincRNA MGP_CBAJ_T0060494.1 MGP_CBAJ_G0026915.1 mouse_genomes_project 3 57808974 58151743 + MGP_CBAJ_P0060494 Dclk1 protein_coding protein_coding MGP_CBAJ_T0060495.1 MGP_CBAJ_G0026915.1 mouse_genomes_project 3 57809136 58151739 + MGP_CBAJ_P0060495 Dclk1 protein_coding protein_coding MGP_CBAJ_T0060496.1 MGP_CBAJ_G0026915.1 mouse_genomes_project 3 57809136 58072239 + MGP_CBAJ_P0060496 Dclk1 protein_coding protein_coding MGP_CBAJ_T0060497.1 MGP_CBAJ_G0026915.1 mouse_genomes_project 3 57813677 57823045 + MGP_CBAJ_P0060497 Dclk1 protein_coding protein_coding MGP_CBAJ_T0060498.1 MGP_CBAJ_G0026915.1 mouse_genomes_project 3 57813885 57823015 + Dclk1 protein_coding retained_intron MGP_CBAJ_T0060499.1 MGP_CBAJ_G0026915.1 mouse_genomes_project 3 57929317 58081563 + Dclk1 protein_coding processed_transcript MGP_CBAJ_T0060500.1 MGP_CBAJ_G0026915.1 mouse_genomes_project 3 58046751 58084196 + Dclk1 protein_coding retained_intron MGP_CBAJ_T0060501.1 MGP_CBAJ_G0026915.1 mouse_genomes_project 3 58057420 58072241 + MGP_CBAJ_P0060501 Dclk1 protein_coding protein_coding MGP_CBAJ_T0060502.1 MGP_CBAJ_G0026915.1 mouse_genomes_project 3 58057450 58151739 + MGP_CBAJ_P0060502 Dclk1 protein_coding protein_coding MGP_CBAJ_T0060503.1 MGP_CBAJ_G0026915.1 mouse_genomes_project 3 58057591 58149227 + MGP_CBAJ_P0060503 Dclk1 protein_coding protein_coding MGP_CBAJ_T0060504.1 MGP_CBAJ_G0026915.1 mouse_genomes_project 3 58057608 58149226 + MGP_CBAJ_P0060504 Dclk1 protein_coding protein_coding MGP_CBAJ_T0060505.1 MGP_CBAJ_G0026915.1 mouse_genomes_project 3 58057608 58129875 + MGP_CBAJ_P0060505 Dclk1 protein_coding protein_coding MGP_CBAJ_T0060506.1 MGP_CBAJ_G0026915.1 mouse_genomes_project 3 58057608 58147810 + MGP_CBAJ_P0060506 Dclk1 protein_coding protein_coding MGP_CBAJ_T0060507.1 MGP_CBAJ_G0026915.1 mouse_genomes_project 3 58057664 58134957 + MGP_CBAJ_P0060507 Dclk1 protein_coding protein_coding MGP_CBAJ_T0060509.1 MGP_CBAJ_G0026915.1 mouse_genomes_project 3 58140553 58146987 + Dclk1 protein_coding processed_transcript MGP_CBAJ_T0013771.1 MGP_CBAJ_G0011883.1 mouse_genomes_project 3 20531122 20531894 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100441.1 MGP_CBAJ_G0038696.1 mouse_genomes_project 3 40544544 40544629 - Gm23831 snoRNA snoRNA MGP_CBAJ_T0098163.1 MGP_CBAJ_G0036436.1 mouse_genomes_project 3 14442731 14443060 - Gm25863 ribozyme ribozyme MGP_CBAJ_T0061946.1 MGP_CBAJ_G0027251.1 mouse_genomes_project 3 102999996 103006851 + MGP_CBAJ_P0061946 protein_coding protein_coding MGP_CBAJ_T0061344.1 MGP_CBAJ_G0027101.1 mouse_genomes_project 3 95677636 95819829 + MGP_CBAJ_P0061344 Ash1l protein_coding protein_coding MGP_CBAJ_T0061346.1 MGP_CBAJ_G0027101.1 mouse_genomes_project 3 95694340 95819827 + MGP_CBAJ_P0061346 Ash1l protein_coding protein_coding MGP_CBAJ_T0061347.1 MGP_CBAJ_G0027101.1 mouse_genomes_project 3 95758028 95763113 + Ash1l protein_coding retained_intron MGP_CBAJ_T0061348.1 MGP_CBAJ_G0027101.1 mouse_genomes_project 3 95792274 95795205 + Ash1l protein_coding retained_intron MGP_CBAJ_T0011423.1 MGP_CBAJ_G0009561.1 mouse_genomes_project 3 136237394 136237692 + Gm23673 misc_RNA misc_RNA MGP_CBAJ_T0063703.1 MGP_CBAJ_G0027623.1 mouse_genomes_project 3 156330155 156349229 + MGP_CBAJ_P0063703 Gtf2b protein_coding protein_coding MGP_CBAJ_T0063704.1 MGP_CBAJ_G0027623.1 mouse_genomes_project 3 156330333 156333533 + Gtf2b protein_coding retained_intron MGP_CBAJ_T0013936.1 MGP_CBAJ_G0012048.1 mouse_genomes_project 3 80312384 80313686 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010438.1 MGP_CBAJ_G0008576.1 mouse_genomes_project 3 160437111 160437185 - Gm22901 miRNA miRNA MGP_CBAJ_T0013711.1 MGP_CBAJ_G0011823.1 mouse_genomes_project 3 3215738 3218668 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007546.1 MGP_CBAJ_G0006166.1 mouse_genomes_project 3 111339237 111341458 + Gm42678 lincRNA lincRNA MGP_CBAJ_T0062148.1 MGP_CBAJ_G0027286.1 mouse_genomes_project 3 104208626 104219910 + Mtmr11 protein_coding retained_intron MGP_CBAJ_T0062149.1 MGP_CBAJ_G0027286.1 mouse_genomes_project 3 104208626 104219911 + MGP_CBAJ_P0062149 Mtmr11 protein_coding protein_coding MGP_CBAJ_T0062150.1 MGP_CBAJ_G0027286.1 mouse_genomes_project 3 104208707 104219911 + MGP_CBAJ_P0062150 Mtmr11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062151.1 MGP_CBAJ_G0027286.1 mouse_genomes_project 3 104208788 104210015 + Mtmr11 protein_coding retained_intron MGP_CBAJ_T0062152.1 MGP_CBAJ_G0027286.1 mouse_genomes_project 3 104209207 104219911 + Mtmr11 protein_coding processed_transcript MGP_CBAJ_T0062153.1 MGP_CBAJ_G0027286.1 mouse_genomes_project 3 104217068 104218187 + Mtmr11 protein_coding processed_transcript MGP_CBAJ_T0062154.1 MGP_CBAJ_G0027286.1 mouse_genomes_project 3 104218778 104219663 + Mtmr11 protein_coding processed_transcript MGP_CBAJ_T0001135.1 MGP_CBAJ_G0001064.1 mouse_genomes_project 3 46717439 46720578 + TEC TEC MGP_CBAJ_T0101093.1 MGP_CBAJ_G0039302.1 mouse_genomes_project 3 20643798 20703750 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101094.1 MGP_CBAJ_G0039302.1 mouse_genomes_project 3 20643877 20655162 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101095.1 MGP_CBAJ_G0039302.1 mouse_genomes_project 3 20644067 20644232 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0061743.1 MGP_CBAJ_G0027182.1 mouse_genomes_project 3 99659669 99661282 + MGP_CBAJ_P0061743 Sprr2h protein_coding protein_coding MGP_CBAJ_T0061744.1 MGP_CBAJ_G0027182.1 mouse_genomes_project 3 99659684 99661058 + MGP_CBAJ_P0061744 Sprr2h protein_coding protein_coding MGP_CBAJ_T0060106.1 MGP_CBAJ_G0026845.1 mouse_genomes_project 3 36287336 36332591 - MGP_CBAJ_P0060106 Mccc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060107.1 MGP_CBAJ_G0026845.1 mouse_genomes_project 3 36287860 36332660 - MGP_CBAJ_P0060107 Mccc1 protein_coding protein_coding MGP_CBAJ_T0060108.1 MGP_CBAJ_G0026845.1 mouse_genomes_project 3 36287866 36289137 - Mccc1 protein_coding retained_intron MGP_CBAJ_T0060109.1 MGP_CBAJ_G0026845.1 mouse_genomes_project 3 36289754 36297142 - Mccc1 protein_coding retained_intron MGP_CBAJ_T0060110.1 MGP_CBAJ_G0026845.1 mouse_genomes_project 3 36301416 36327890 - Mccc1 protein_coding retained_intron MGP_CBAJ_T0060111.1 MGP_CBAJ_G0026845.1 mouse_genomes_project 3 36303229 36306121 - Mccc1 protein_coding retained_intron MGP_CBAJ_T0060112.1 MGP_CBAJ_G0026845.1 mouse_genomes_project 3 36305330 36321199 - MGP_CBAJ_P0060112 Mccc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060113.1 MGP_CBAJ_G0026845.1 mouse_genomes_project 3 36316355 36332623 - MGP_CBAJ_P0060113 Mccc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0014121.1 MGP_CBAJ_G0012233.1 mouse_genomes_project 3 143467765 143468783 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100427.1 MGP_CBAJ_G0038682.1 mouse_genomes_project 3 1441269 1441402 - Gm22944 snoRNA snoRNA MGP_CBAJ_T0014027.1 MGP_CBAJ_G0012139.1 mouse_genomes_project 3 109894064 109894494 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063680.1 MGP_CBAJ_G0027617.1 mouse_genomes_project 3 155941763 155964009 + Gbp5 protein_coding processed_transcript MGP_CBAJ_T0063681.1 MGP_CBAJ_G0027617.1 mouse_genomes_project 3 155946812 155968041 + MGP_CBAJ_P0063681 Gbp5 protein_coding protein_coding MGP_CBAJ_T0063682.1 MGP_CBAJ_G0027617.1 mouse_genomes_project 3 155955436 155960239 + Gbp5 protein_coding retained_intron MGP_CBAJ_T0061402.1 MGP_CBAJ_G0027110.1 mouse_genomes_project 3 95968349 95975276 + MGP_CBAJ_P0061402 Gba protein_coding protein_coding MGP_CBAJ_T0061403.1 MGP_CBAJ_G0027110.1 mouse_genomes_project 3 95968357 95975278 + MGP_CBAJ_P0061403 Gba protein_coding nonsense_mediated_decay MGP_CBAJ_T0061404.1 MGP_CBAJ_G0027110.1 mouse_genomes_project 3 95968361 95975278 + MGP_CBAJ_P0061404 Gba protein_coding protein_coding MGP_CBAJ_T0061405.1 MGP_CBAJ_G0027110.1 mouse_genomes_project 3 95972081 95972985 + Gba protein_coding retained_intron MGP_CBAJ_T0061406.1 MGP_CBAJ_G0027110.1 mouse_genomes_project 3 95974813 95975563 + Gba protein_coding retained_intron MGP_CBAJ_T0014037.1 MGP_CBAJ_G0012149.1 mouse_genomes_project 3 112616431 112616831 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014110.1 MGP_CBAJ_G0012222.1 mouse_genomes_project 3 139464952 139465493 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007573.1 MGP_CBAJ_G0006189.1 mouse_genomes_project 3 128635257 128639423 + 4921521D15Rik lincRNA lincRNA MGP_CBAJ_T0101317.1 MGP_CBAJ_G0039417.1 mouse_genomes_project 3 68335593 68335826 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0063584.1 MGP_CBAJ_G0027596.1 mouse_genomes_project 3 150777492 150779535 + MGP_CBAJ_P0063584 protein_coding protein_coding MGP_CBAJ_T0060399.1 MGP_CBAJ_G0026896.1 mouse_genomes_project 3 55328298 55559816 + MGP_CBAJ_P0060399 Lhfp protein_coding protein_coding MGP_CBAJ_T0060400.1 MGP_CBAJ_G0026896.1 mouse_genomes_project 3 55328329 55559812 + Lhfp protein_coding processed_transcript MGP_CBAJ_T0060401.1 MGP_CBAJ_G0026896.1 mouse_genomes_project 3 55328353 55559816 + MGP_CBAJ_P0060401 Lhfp protein_coding protein_coding MGP_CBAJ_T0060402.1 MGP_CBAJ_G0026896.1 mouse_genomes_project 3 55526026 55529119 + Lhfp protein_coding retained_intron MGP_CBAJ_T0007489.1 MGP_CBAJ_G0006125.1 mouse_genomes_project 3 88631663 88648659 - Gm43348 lincRNA lincRNA MGP_CBAJ_T0001289.1 MGP_CBAJ_G0001216.1 mouse_genomes_project 3 138600452 138601338 - TEC TEC MGP_CBAJ_T0007478.1 MGP_CBAJ_G0006116.1 mouse_genomes_project 3 80930839 80979974 + Gm37256 lincRNA lincRNA MGP_CBAJ_T0007661.1 MGP_CBAJ_G0006261.1 mouse_genomes_project 3 163523601 163527681 - Gm10287 lincRNA lincRNA MGP_CBAJ_T0007662.1 MGP_CBAJ_G0006261.1 mouse_genomes_project 3 163523607 163527681 - Gm10287 lincRNA lincRNA MGP_CBAJ_T0060980.1 MGP_CBAJ_G0027031.1 mouse_genomes_project 3 90055878 90122248 - MGP_CBAJ_P0060980 Mnd1 protein_coding protein_coding MGP_CBAJ_T0014113.1 MGP_CBAJ_G0012225.1 mouse_genomes_project 3 141248463 141249227 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001224.1 MGP_CBAJ_G0001151.1 mouse_genomes_project 3 100753436 100758998 + TEC TEC MGP_CBAJ_T0013856.1 MGP_CBAJ_G0011968.1 mouse_genomes_project 3 54422239 54422990 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062860.1 MGP_CBAJ_G0027462.1 mouse_genomes_project 3 118320074 118369227 + MGP_CBAJ_P0062860 Aknad1 protein_coding protein_coding MGP_CBAJ_T0062861.1 MGP_CBAJ_G0027462.1 mouse_genomes_project 3 118328633 118361727 + MGP_CBAJ_P0062861 Aknad1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062862.1 MGP_CBAJ_G0027462.1 mouse_genomes_project 3 118337349 118346924 + Aknad1 protein_coding retained_intron MGP_CBAJ_T0062863.1 MGP_CBAJ_G0027462.1 mouse_genomes_project 3 118345041 118361432 + Aknad1 protein_coding retained_intron MGP_CBAJ_T0013819.1 MGP_CBAJ_G0011931.1 mouse_genomes_project 3 40567027 40567307 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0063667.1 MGP_CBAJ_G0027616.1 mouse_genomes_project 3 155654845 155830266 - MGP_CBAJ_P0063667 Pdlim5 protein_coding protein_coding MGP_CBAJ_T0063668.1 MGP_CBAJ_G0027616.1 mouse_genomes_project 3 155658028 155823828 - MGP_CBAJ_P0063668 Pdlim5 protein_coding protein_coding MGP_CBAJ_T0063669.1 MGP_CBAJ_G0027616.1 mouse_genomes_project 3 155658028 155823828 - MGP_CBAJ_P0063669 Pdlim5 protein_coding protein_coding MGP_CBAJ_T0063670.1 MGP_CBAJ_G0027616.1 mouse_genomes_project 3 155658028 155830151 - MGP_CBAJ_P0063670 Pdlim5 protein_coding protein_coding MGP_CBAJ_T0063671.1 MGP_CBAJ_G0027616.1 mouse_genomes_project 3 155658028 155823828 - MGP_CBAJ_P0063671 Pdlim5 protein_coding protein_coding MGP_CBAJ_T0063672.1 MGP_CBAJ_G0027616.1 mouse_genomes_project 3 155659808 155661874 - Pdlim5 protein_coding retained_intron MGP_CBAJ_T0063673.1 MGP_CBAJ_G0027616.1 mouse_genomes_project 3 155664707 155728355 - MGP_CBAJ_P0063673 Pdlim5 protein_coding protein_coding MGP_CBAJ_T0063674.1 MGP_CBAJ_G0027616.1 mouse_genomes_project 3 155664766 155728818 - MGP_CBAJ_P0063674 Pdlim5 protein_coding protein_coding MGP_CBAJ_T0063675.1 MGP_CBAJ_G0027616.1 mouse_genomes_project 3 155726440 155823870 - MGP_CBAJ_P0063675 Pdlim5 protein_coding protein_coding MGP_CBAJ_T0063676.1 MGP_CBAJ_G0027616.1 mouse_genomes_project 3 155726675 155830180 - MGP_CBAJ_P0063676 Pdlim5 protein_coding protein_coding MGP_CBAJ_T0063677.1 MGP_CBAJ_G0027616.1 mouse_genomes_project 3 155726680 155823870 - MGP_CBAJ_P0063677 Pdlim5 protein_coding protein_coding MGP_CBAJ_T0063678.1 MGP_CBAJ_G0027616.1 mouse_genomes_project 3 155727596 155830191 - MGP_CBAJ_P0063678 Pdlim5 protein_coding protein_coding MGP_CBAJ_T0063679.1 MGP_CBAJ_G0027616.1 mouse_genomes_project 3 155727703 155830269 - MGP_CBAJ_P0063679 Pdlim5 protein_coding protein_coding MGP_CBAJ_T0013740.1 MGP_CBAJ_G0011852.1 mouse_genomes_project 3 11778886 11779445 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013961.1 MGP_CBAJ_G0012073.1 mouse_genomes_project 3 92100514 92100989 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007535.1 MGP_CBAJ_G0006157.1 mouse_genomes_project 3 107488636 107492559 + Gm12440 lincRNA lincRNA MGP_CBAJ_T0099169.1 MGP_CBAJ_G0037424.1 mouse_genomes_project 3 61960740 61960912 - Gm25572 snRNA snRNA MGP_CBAJ_T0001254.1 MGP_CBAJ_G0001181.1 mouse_genomes_project 3 126981318 126981757 + TEC TEC MGP_CBAJ_T0014183.1 MGP_CBAJ_G0012295.1 mouse_genomes_project 3 166921546 166922217 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063203.1 MGP_CBAJ_G0027530.1 mouse_genomes_project 3 135901833 135923979 - MGP_CBAJ_P0063203 1700003H04Rik protein_coding protein_coding MGP_CBAJ_T0063204.1 MGP_CBAJ_G0027530.1 mouse_genomes_project 3 135901833 135923979 - MGP_CBAJ_P0063204 1700003H04Rik protein_coding protein_coding MGP_CBAJ_T0063205.1 MGP_CBAJ_G0027530.1 mouse_genomes_project 3 135911486 135923980 - MGP_CBAJ_P0063205 1700003H04Rik protein_coding protein_coding MGP_CBAJ_T0063206.1 MGP_CBAJ_G0027530.1 mouse_genomes_project 3 135916170 135923989 - MGP_CBAJ_P0063206 1700003H04Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0063207.1 MGP_CBAJ_G0027530.1 mouse_genomes_project 3 135916171 135921406 - MGP_CBAJ_P0063207 1700003H04Rik protein_coding protein_coding MGP_CBAJ_T0063208.1 MGP_CBAJ_G0027530.1 mouse_genomes_project 3 135916171 135923982 - MGP_CBAJ_P0063208 1700003H04Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0013878.1 MGP_CBAJ_G0011990.1 mouse_genomes_project 3 62452807 62454619 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0060817.1 MGP_CBAJ_G0026991.1 mouse_genomes_project 3 74108214 74132614 + MGP_CBAJ_P0060817 Otol1 protein_coding protein_coding MGP_CBAJ_T0060424.1 MGP_CBAJ_G0026902.1 mouse_genomes_project 3 56582656 56614475 + Trpc4 protein_coding processed_transcript MGP_CBAJ_T0060425.1 MGP_CBAJ_G0026902.1 mouse_genomes_project 3 56582678 56765594 + MGP_CBAJ_P0060425 Trpc4 protein_coding protein_coding MGP_CBAJ_T0060426.1 MGP_CBAJ_G0026902.1 mouse_genomes_project 3 56582687 56708354 + Trpc4 protein_coding retained_intron MGP_CBAJ_T0060427.1 MGP_CBAJ_G0026902.1 mouse_genomes_project 3 56582725 56765590 + MGP_CBAJ_P0060427 Trpc4 protein_coding protein_coding MGP_CBAJ_T0060428.1 MGP_CBAJ_G0026902.1 mouse_genomes_project 3 56582994 56658127 + Trpc4 protein_coding retained_intron MGP_CBAJ_T0060429.1 MGP_CBAJ_G0026902.1 mouse_genomes_project 3 56583236 56765538 + MGP_CBAJ_P0060429 Trpc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0098330.1 MGP_CBAJ_G0036596.1 mouse_genomes_project 3 107667088 107670555 + Gm42717 sense_intronic sense_intronic MGP_CBAJ_T0060270.1 MGP_CBAJ_G0026876.1 mouse_genomes_project 3 41716099 41746911 + MGP_CBAJ_P0060270 Larp1b protein_coding protein_coding MGP_CBAJ_T0060271.1 MGP_CBAJ_G0026876.1 mouse_genomes_project 3 41716495 41746375 + MGP_CBAJ_P0060271 Larp1b protein_coding protein_coding MGP_CBAJ_T0060272.1 MGP_CBAJ_G0026876.1 mouse_genomes_project 3 41716521 41730987 + MGP_CBAJ_P0060272 Larp1b protein_coding protein_coding MGP_CBAJ_T0060273.1 MGP_CBAJ_G0026876.1 mouse_genomes_project 3 41730390 41732793 + Larp1b protein_coding processed_transcript MGP_CBAJ_T0060274.1 MGP_CBAJ_G0026876.1 mouse_genomes_project 3 41730927 41746528 + MGP_CBAJ_P0060274 Larp1b protein_coding protein_coding MGP_CBAJ_T0060275.1 MGP_CBAJ_G0026876.1 mouse_genomes_project 3 41732738 41783776 + MGP_CBAJ_P0060275 Larp1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0060276.1 MGP_CBAJ_G0026876.1 mouse_genomes_project 3 41740386 41746122 + Larp1b protein_coding processed_transcript MGP_CBAJ_T0060277.1 MGP_CBAJ_G0026876.1 mouse_genomes_project 3 41782486 41811351 + Larp1b protein_coding processed_transcript MGP_CBAJ_T0060278.1 MGP_CBAJ_G0026876.1 mouse_genomes_project 3 41793127 41811407 + Larp1b protein_coding retained_intron MGP_CBAJ_T0060279.1 MGP_CBAJ_G0026876.1 mouse_genomes_project 3 41795021 41810840 + Larp1b protein_coding processed_transcript MGP_CBAJ_T0060280.1 MGP_CBAJ_G0026876.1 mouse_genomes_project 3 41795699 41810276 + MGP_CBAJ_P0060280 Larp1b protein_coding protein_coding MGP_CBAJ_T0060281.1 MGP_CBAJ_G0026876.1 mouse_genomes_project 3 41804699 41805425 + Larp1b protein_coding processed_transcript MGP_CBAJ_T0060282.1 MGP_CBAJ_G0026876.1 mouse_genomes_project 3 41804718 41811371 + Larp1b protein_coding processed_transcript MGP_CBAJ_T0060283.1 MGP_CBAJ_G0026876.1 mouse_genomes_project 3 41807917 41809798 + Larp1b protein_coding processed_transcript MGP_CBAJ_T0062700.1 MGP_CBAJ_G0027425.1 mouse_genomes_project 3 116844911 116866127 - MGP_CBAJ_P0062700 Kcnc4 protein_coding protein_coding MGP_CBAJ_T0007602.1 MGP_CBAJ_G0006209.1 mouse_genomes_project 3 142989505 142990996 + Gm36520 lincRNA lincRNA MGP_CBAJ_T0063829.1 MGP_CBAJ_G0027649.1 mouse_genomes_project 3 160553490 160559256 + MGP_CBAJ_P0063829 Gng5 protein_coding protein_coding MGP_CBAJ_T0063830.1 MGP_CBAJ_G0027649.1 mouse_genomes_project 3 160553573 160559231 + MGP_CBAJ_P0063830 Gng5 protein_coding protein_coding MGP_CBAJ_T0063831.1 MGP_CBAJ_G0027649.1 mouse_genomes_project 3 160553792 160559232 + MGP_CBAJ_P0063831 Gng5 protein_coding protein_coding MGP_CBAJ_T0001309.1 MGP_CBAJ_G0001235.1 mouse_genomes_project 3 142704300 142707118 + TEC TEC MGP_CBAJ_T0014103.1 MGP_CBAJ_G0012215.1 mouse_genomes_project 3 135045621 135046222 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007641.1 MGP_CBAJ_G0006244.1 mouse_genomes_project 3 157180381 157201023 + Gm42703 lincRNA lincRNA MGP_CBAJ_T0062560.1 MGP_CBAJ_G0027387.1 mouse_genomes_project 3 113823289 113828738 + MGP_CBAJ_P0062560 Rhoc protein_coding protein_coding MGP_CBAJ_T0062561.1 MGP_CBAJ_G0027387.1 mouse_genomes_project 3 113823505 113827253 + MGP_CBAJ_P0062561 Rhoc protein_coding protein_coding MGP_CBAJ_T0062562.1 MGP_CBAJ_G0027387.1 mouse_genomes_project 3 113826258 113827156 + Rhoc protein_coding retained_intron MGP_CBAJ_T0063337.1 MGP_CBAJ_G0027549.1 mouse_genomes_project 3 141830312 141852624 - Rrh protein_coding processed_transcript MGP_CBAJ_T0063338.1 MGP_CBAJ_G0027549.1 mouse_genomes_project 3 141834520 141852636 - MGP_CBAJ_P0063338 Rrh protein_coding protein_coding MGP_CBAJ_T0063339.1 MGP_CBAJ_G0027549.1 mouse_genomes_project 3 141834523 141852622 - MGP_CBAJ_P0063339 Rrh protein_coding protein_coding MGP_CBAJ_T0063340.1 MGP_CBAJ_G0027549.1 mouse_genomes_project 3 141834749 141852718 - MGP_CBAJ_P0063340 Rrh protein_coding protein_coding MGP_CBAJ_T0063341.1 MGP_CBAJ_G0027549.1 mouse_genomes_project 3 141834857 141852593 - MGP_CBAJ_P0063341 Rrh protein_coding nonsense_mediated_decay MGP_CBAJ_T0063342.1 MGP_CBAJ_G0027549.1 mouse_genomes_project 3 141843543 141852625 - Rrh protein_coding processed_transcript MGP_CBAJ_T0063343.1 MGP_CBAJ_G0027549.1 mouse_genomes_project 3 141849584 141852589 - Rrh protein_coding retained_intron MGP_CBAJ_T0013745.1 MGP_CBAJ_G0011857.1 mouse_genomes_project 3 12593280 12593420 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100469.1 MGP_CBAJ_G0038724.1 mouse_genomes_project 3 96907805 96907941 - Gm24608 snoRNA snoRNA MGP_CBAJ_T0013963.1 MGP_CBAJ_G0012075.1 mouse_genomes_project 3 92354948 92355381 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061089.1 MGP_CBAJ_G0027057.1 mouse_genomes_project 3 94163239 94174892 - MGP_CBAJ_P0061089 Lrrc71 protein_coding protein_coding MGP_CBAJ_T0061090.1 MGP_CBAJ_G0027057.1 mouse_genomes_project 3 94164211 94174894 - Lrrc71 protein_coding retained_intron MGP_CBAJ_T0061091.1 MGP_CBAJ_G0027057.1 mouse_genomes_project 3 94164262 94164889 - Lrrc71 protein_coding processed_transcript MGP_CBAJ_T0061092.1 MGP_CBAJ_G0027057.1 mouse_genomes_project 3 94165302 94167369 - MGP_CBAJ_P0061092 Lrrc71 protein_coding protein_coding MGP_CBAJ_T0061093.1 MGP_CBAJ_G0027057.1 mouse_genomes_project 3 94165397 94174733 - MGP_CBAJ_P0061093 Lrrc71 protein_coding unknown_likely_coding MGP_CBAJ_T0061094.1 MGP_CBAJ_G0027057.1 mouse_genomes_project 3 94165397 94174733 - MGP_CBAJ_P0061094 Lrrc71 protein_coding unknown_likely_coding MGP_CBAJ_T0061095.1 MGP_CBAJ_G0027057.1 mouse_genomes_project 3 94171551 94174863 - Lrrc71 protein_coding retained_intron MGP_CBAJ_T0001201.1 MGP_CBAJ_G0001128.1 mouse_genomes_project 3 72321517 72328435 + TEC TEC MGP_CBAJ_T0063902.1 MGP_CBAJ_G0027662.1 mouse_genomes_project 3 166843807 166864057 - Gipc2 protein_coding processed_transcript MGP_CBAJ_T0063903.1 MGP_CBAJ_G0027662.1 mouse_genomes_project 3 166844113 166947763 - MGP_CBAJ_P0063903 Gipc2 protein_coding protein_coding MGP_CBAJ_T0063904.1 MGP_CBAJ_G0027662.1 mouse_genomes_project 3 166844115 166859236 - Gipc2 protein_coding processed_transcript MGP_CBAJ_T0063905.1 MGP_CBAJ_G0027662.1 mouse_genomes_project 3 166844156 166858784 - Gipc2 protein_coding processed_transcript MGP_CBAJ_T0063906.1 MGP_CBAJ_G0027662.1 mouse_genomes_project 3 166844293 166855046 - Gipc2 protein_coding retained_intron MGP_CBAJ_T0063907.1 MGP_CBAJ_G0027662.1 mouse_genomes_project 3 166844468 166912031 - Gipc2 protein_coding processed_transcript MGP_CBAJ_T0063908.1 MGP_CBAJ_G0027662.1 mouse_genomes_project 3 166854028 166863961 - Gipc2 protein_coding retained_intron MGP_CBAJ_T0063909.1 MGP_CBAJ_G0027662.1 mouse_genomes_project 3 166889973 166902177 - Gipc2 protein_coding retained_intron MGP_CBAJ_T0063910.1 MGP_CBAJ_G0027662.1 mouse_genomes_project 3 166892467 166947283 - Gipc2 protein_coding processed_transcript MGP_CBAJ_T0007425.1 MGP_CBAJ_G0006077.1 mouse_genomes_project 3 42274376 42278685 - Gm42434 lincRNA lincRNA MGP_CBAJ_T0007426.1 MGP_CBAJ_G0006077.1 mouse_genomes_project 3 42278560 42279191 - Gm42434 lincRNA lincRNA MGP_CBAJ_T0013812.1 MGP_CBAJ_G0011924.1 mouse_genomes_project 3 38251193 38251568 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0062301.1 MGP_CBAJ_G0027330.1 mouse_genomes_project 3 106657849 106684378 - MGP_CBAJ_P0062301 protein_coding protein_coding MGP_CBAJ_T0062302.1 MGP_CBAJ_G0027330.1 mouse_genomes_project 3 106665174 106677943 - protein_coding retained_intron MGP_CBAJ_T0062303.1 MGP_CBAJ_G0027330.1 mouse_genomes_project 3 106665709 106672963 - protein_coding retained_intron MGP_CBAJ_T0062304.1 MGP_CBAJ_G0027330.1 mouse_genomes_project 3 106665816 106681934 - MGP_CBAJ_P0062304 protein_coding protein_coding MGP_CBAJ_T0063501.1 MGP_CBAJ_G0027582.1 mouse_genomes_project 3 147962991 147981098 - MGP_CBAJ_P0063501 Cisd2 protein_coding protein_coding MGP_CBAJ_T0063502.1 MGP_CBAJ_G0027582.1 mouse_genomes_project 3 147966591 147980580 - MGP_CBAJ_P0063502 Cisd2 protein_coding protein_coding MGP_CBAJ_T0063503.1 MGP_CBAJ_G0027582.1 mouse_genomes_project 3 147977124 147980577 - Cisd2 protein_coding retained_intron MGP_CBAJ_T0063504.1 MGP_CBAJ_G0027582.1 mouse_genomes_project 3 147978030 147980252 - Cisd2 protein_coding processed_transcript MGP_CBAJ_T0001104.1 MGP_CBAJ_G0001033.1 mouse_genomes_project 3 34151717 34152802 - TEC TEC MGP_CBAJ_T0060268.1 MGP_CBAJ_G0026875.1 mouse_genomes_project 3 41641209 41646768 - MGP_CBAJ_P0060268 1700034I23Rik protein_coding protein_coding MGP_CBAJ_T0001281.1 MGP_CBAJ_G0001208.1 mouse_genomes_project 3 138196612 138199091 + TEC TEC MGP_CBAJ_T0007678.1 MGP_CBAJ_G0006271.1 mouse_genomes_project 3 168048302 168068225 - Gm43832 lincRNA lincRNA MGP_CBAJ_T0007679.1 MGP_CBAJ_G0006271.1 mouse_genomes_project 3 168051810 168060830 - Gm43832 lincRNA lincRNA MGP_CBAJ_T0099164.1 MGP_CBAJ_G0037419.1 mouse_genomes_project 3 57875479 57875586 + Gm25132 snRNA snRNA MGP_CBAJ_T0013896.1 MGP_CBAJ_G0012008.1 mouse_genomes_project 3 69244900 69245707 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060117.1 MGP_CBAJ_G0026847.1 mouse_genomes_project 3 36404591 36438731 + MGP_CBAJ_P0060117 Acad9 protein_coding protein_coding MGP_CBAJ_T0060118.1 MGP_CBAJ_G0026847.1 mouse_genomes_project 3 36404679 36416308 + MGP_CBAJ_P0060118 Acad9 protein_coding protein_coding MGP_CBAJ_T0060119.1 MGP_CBAJ_G0026847.1 mouse_genomes_project 3 36404684 36434272 + Acad9 protein_coding retained_intron MGP_CBAJ_T0060120.1 MGP_CBAJ_G0026847.1 mouse_genomes_project 3 36417056 36420994 + Acad9 protein_coding retained_intron MGP_CBAJ_T0060121.1 MGP_CBAJ_G0026847.1 mouse_genomes_project 3 36418739 36432067 + MGP_CBAJ_P0060121 Acad9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060122.1 MGP_CBAJ_G0026847.1 mouse_genomes_project 3 36420433 36431719 + Acad9 protein_coding retained_intron MGP_CBAJ_T0060123.1 MGP_CBAJ_G0026847.1 mouse_genomes_project 3 36420508 36434272 + Acad9 protein_coding retained_intron MGP_CBAJ_T0063665.1 MGP_CBAJ_G0027615.1 mouse_genomes_project 3 155207846 155256189 - MGP_CBAJ_P0063665 Bmpr1b protein_coding protein_coding MGP_CBAJ_T0063666.1 MGP_CBAJ_G0027615.1 mouse_genomes_project 3 155211027 155315612 - MGP_CBAJ_P0063666 Bmpr1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0014069.1 MGP_CBAJ_G0012181.1 mouse_genomes_project 3 123100690 123102945 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013735.1 MGP_CBAJ_G0011847.1 mouse_genomes_project 3 10262607 10262974 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0063550.1 MGP_CBAJ_G0027589.1 mouse_genomes_project 3 149400063 149550000 + Ppp3ca protein_coding processed_transcript MGP_CBAJ_T0063551.1 MGP_CBAJ_G0027589.1 mouse_genomes_project 3 149400063 149710364 + MGP_CBAJ_P0063551 Ppp3ca protein_coding protein_coding MGP_CBAJ_T0063552.1 MGP_CBAJ_G0027589.1 mouse_genomes_project 3 149400787 149708413 + MGP_CBAJ_P0063552 Ppp3ca protein_coding protein_coding MGP_CBAJ_T0063553.1 MGP_CBAJ_G0027589.1 mouse_genomes_project 3 149596671 149644787 + Ppp3ca protein_coding processed_transcript MGP_CBAJ_T0063554.1 MGP_CBAJ_G0027589.1 mouse_genomes_project 3 149643720 149646367 + Ppp3ca protein_coding retained_intron MGP_CBAJ_T0063555.1 MGP_CBAJ_G0027589.1 mouse_genomes_project 3 149651221 149653258 + Ppp3ca protein_coding retained_intron MGP_CBAJ_T0063556.1 MGP_CBAJ_G0027589.1 mouse_genomes_project 3 149668703 149699378 + Ppp3ca protein_coding processed_transcript MGP_CBAJ_T0063557.1 MGP_CBAJ_G0027589.1 mouse_genomes_project 3 149669519 149672053 + Ppp3ca protein_coding retained_intron MGP_CBAJ_T0063639.1 MGP_CBAJ_G0027610.1 mouse_genomes_project 3 151688389 151872826 + MGP_CBAJ_P0063639 Tspan5 protein_coding protein_coding MGP_CBAJ_T0063640.1 MGP_CBAJ_G0027610.1 mouse_genomes_project 3 151688499 151869571 + MGP_CBAJ_P0063640 Tspan5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063641.1 MGP_CBAJ_G0027610.1 mouse_genomes_project 3 151688699 151861889 + MGP_CBAJ_P0063641 Tspan5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063642.1 MGP_CBAJ_G0027610.1 mouse_genomes_project 3 151688963 151859521 + MGP_CBAJ_P0063642 Tspan5 protein_coding protein_coding MGP_CBAJ_T0063643.1 MGP_CBAJ_G0027610.1 mouse_genomes_project 3 151730002 151867640 + MGP_CBAJ_P0063643 Tspan5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063644.1 MGP_CBAJ_G0027610.1 mouse_genomes_project 3 151805568 151869562 + MGP_CBAJ_P0063644 Tspan5 protein_coding protein_coding MGP_CBAJ_T0099225.1 MGP_CBAJ_G0037480.1 mouse_genomes_project 3 151229805 151229964 + Gm23467 snRNA snRNA MGP_CBAJ_T0004204.1 MGP_CBAJ_G0003692.1 mouse_genomes_project 3 97391280 97400507 + antisense antisense MGP_CBAJ_T0014111.1 MGP_CBAJ_G0012223.1 mouse_genomes_project 3 140105713 140106147 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004270.1 MGP_CBAJ_G0003730.1 mouse_genomes_project 3 127079058 127080887 - Gm42893 antisense antisense MGP_CBAJ_T0004156.1 MGP_CBAJ_G0003656.1 mouse_genomes_project 3 53960837 53967207 + Gm37229 antisense antisense MGP_CBAJ_T0001127.1 MGP_CBAJ_G0001056.1 mouse_genomes_project 3 42459746 42460761 - TEC TEC MGP_CBAJ_T0007427.1 MGP_CBAJ_G0006078.1 mouse_genomes_project 3 42280823 42285288 - Platr4 lincRNA lincRNA MGP_CBAJ_T0007428.1 MGP_CBAJ_G0006078.1 mouse_genomes_project 3 42284490 42290000 - Platr4 lincRNA lincRNA MGP_CBAJ_T0007429.1 MGP_CBAJ_G0006078.1 mouse_genomes_project 3 42285615 42290002 - Platr4 lincRNA lincRNA MGP_CBAJ_T0061364.1 MGP_CBAJ_G0027105.1 mouse_genomes_project 3 95887306 95898055 + MGP_CBAJ_P0061364 Pklr protein_coding protein_coding MGP_CBAJ_T0061365.1 MGP_CBAJ_G0027105.1 mouse_genomes_project 3 95887338 95888620 + Pklr protein_coding processed_transcript MGP_CBAJ_T0061366.1 MGP_CBAJ_G0027105.1 mouse_genomes_project 3 95887736 95898267 + MGP_CBAJ_P0061366 Pklr protein_coding protein_coding MGP_CBAJ_T0061367.1 MGP_CBAJ_G0027105.1 mouse_genomes_project 3 95887743 95893000 + MGP_CBAJ_P0061367 Pklr protein_coding protein_coding MGP_CBAJ_T0061368.1 MGP_CBAJ_G0027105.1 mouse_genomes_project 3 95887787 95892368 + Pklr protein_coding processed_transcript MGP_CBAJ_T0004171.1 MGP_CBAJ_G0003668.1 mouse_genomes_project 3 64632931 64638614 - antisense antisense MGP_CBAJ_T0001141.1 MGP_CBAJ_G0001070.1 mouse_genomes_project 3 52681379 52685444 - TEC TEC MGP_CBAJ_T0004330.1 MGP_CBAJ_G0003774.1 mouse_genomes_project 3 173490286 173499216 - B230334C09Rik antisense antisense MGP_CBAJ_T0001308.1 MGP_CBAJ_G0001234.1 mouse_genomes_project 3 142671541 142673440 + TEC TEC MGP_CBAJ_T0062387.1 MGP_CBAJ_G0027355.1 mouse_genomes_project 3 110692756 110697406 + MGP_CBAJ_P0062387 Nhlh2 protein_coding protein_coding MGP_CBAJ_T0062388.1 MGP_CBAJ_G0027355.1 mouse_genomes_project 3 110692826 110698181 + MGP_CBAJ_P0062388 Nhlh2 protein_coding protein_coding MGP_CBAJ_T0062389.1 MGP_CBAJ_G0027355.1 mouse_genomes_project 3 110692835 110697186 + MGP_CBAJ_P0062389 Nhlh2 protein_coding protein_coding MGP_CBAJ_T0060881.1 MGP_CBAJ_G0027006.1 mouse_genomes_project 3 85055655 85087410 - MGP_CBAJ_P0060881 Etfdh protein_coding protein_coding MGP_CBAJ_T0060882.1 MGP_CBAJ_G0027006.1 mouse_genomes_project 3 85055670 85087244 - MGP_CBAJ_P0060882 Etfdh protein_coding protein_coding MGP_CBAJ_T0060883.1 MGP_CBAJ_G0027006.1 mouse_genomes_project 3 85072882 85087230 - Etfdh protein_coding retained_intron MGP_CBAJ_T0060884.1 MGP_CBAJ_G0027006.1 mouse_genomes_project 3 85074465 85087410 - Etfdh protein_coding retained_intron MGP_CBAJ_T0060885.1 MGP_CBAJ_G0027006.1 mouse_genomes_project 3 85076644 85087265 - Etfdh protein_coding retained_intron MGP_CBAJ_T0060886.1 MGP_CBAJ_G0027006.1 mouse_genomes_project 3 85086795 85088047 - Etfdh protein_coding retained_intron MGP_CBAJ_T0060887.1 MGP_CBAJ_G0027006.1 mouse_genomes_project 3 85086813 85087286 - Etfdh protein_coding processed_transcript MGP_CBAJ_T0004227.1 MGP_CBAJ_G0003707.1 mouse_genomes_project 3 105194614 105196664 - 9230114J08Rik antisense antisense MGP_CBAJ_T0063096.1 MGP_CBAJ_G0027508.1 mouse_genomes_project 3 132703080 132715295 + MGP_CBAJ_P0063096 4930432M17Rik protein_coding protein_coding MGP_CBAJ_T0063097.1 MGP_CBAJ_G0027508.1 mouse_genomes_project 3 132703635 132715148 + MGP_CBAJ_P0063097 4930432M17Rik protein_coding protein_coding MGP_CBAJ_T0004286.1 MGP_CBAJ_G0003742.1 mouse_genomes_project 3 139617540 139619283 + Gm43653 antisense antisense MGP_CBAJ_T0099212.1 MGP_CBAJ_G0037467.1 mouse_genomes_project 3 120345457 120345562 - Gm26076 snRNA snRNA MGP_CBAJ_T0001203.1 MGP_CBAJ_G0001130.1 mouse_genomes_project 3 77622261 77624126 - TEC TEC MGP_CBAJ_T0062296.1 MGP_CBAJ_G0027327.1 mouse_genomes_project 3 106485684 106487126 + MGP_CBAJ_P0062296 Adam30 protein_coding protein_coding MGP_CBAJ_T0062297.1 MGP_CBAJ_G0027327.1 mouse_genomes_project 3 106485714 106489224 + MGP_CBAJ_P0062297 Adam30 protein_coding protein_coding MGP_CBAJ_T0061683.1 MGP_CBAJ_G0027156.1 mouse_genomes_project 3 97431514 97433916 - Snapin protein_coding retained_intron MGP_CBAJ_T0061684.1 MGP_CBAJ_G0027156.1 mouse_genomes_project 3 97431522 97434521 - MGP_CBAJ_P0061684 Snapin protein_coding protein_coding MGP_CBAJ_T0061685.1 MGP_CBAJ_G0027156.1 mouse_genomes_project 3 97431858 97434481 - MGP_CBAJ_P0061685 Snapin protein_coding nonsense_mediated_decay MGP_CBAJ_T0061686.1 MGP_CBAJ_G0027156.1 mouse_genomes_project 3 97431861 97434512 - MGP_CBAJ_P0061686 Snapin protein_coding nonsense_mediated_decay MGP_CBAJ_T0061687.1 MGP_CBAJ_G0027156.1 mouse_genomes_project 3 97432487 97434280 - Snapin protein_coding retained_intron MGP_CBAJ_T0013763.1 MGP_CBAJ_G0011875.1 mouse_genomes_project 3 18371209 18372260 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061634.1 MGP_CBAJ_G0027147.1 mouse_genomes_project 3 97175784 97181797 - MGP_CBAJ_P0061634 Creb3l4 protein_coding protein_coding MGP_CBAJ_T0061635.1 MGP_CBAJ_G0027147.1 mouse_genomes_project 3 97175854 97181428 - MGP_CBAJ_P0061635 Creb3l4 protein_coding protein_coding MGP_CBAJ_T0063516.1 MGP_CBAJ_G0027584.1 mouse_genomes_project 3 148046308 148146000 + MGP_CBAJ_P0063516 Manba protein_coding protein_coding MGP_CBAJ_T0063517.1 MGP_CBAJ_G0027584.1 mouse_genomes_project 3 148046308 148130168 + MGP_CBAJ_P0063517 Manba protein_coding nonsense_mediated_decay MGP_CBAJ_T0063518.1 MGP_CBAJ_G0027584.1 mouse_genomes_project 3 148046316 148130129 + Manba protein_coding retained_intron MGP_CBAJ_T0063519.1 MGP_CBAJ_G0027584.1 mouse_genomes_project 3 148046322 148081857 + Manba protein_coding retained_intron MGP_CBAJ_T0063520.1 MGP_CBAJ_G0027584.1 mouse_genomes_project 3 148086176 148113512 + Manba protein_coding processed_transcript MGP_CBAJ_T0063521.1 MGP_CBAJ_G0027584.1 mouse_genomes_project 3 148091945 148093570 + Manba protein_coding processed_transcript MGP_CBAJ_T0063522.1 MGP_CBAJ_G0027584.1 mouse_genomes_project 3 148115840 148123981 + Manba protein_coding retained_intron MGP_CBAJ_T0063523.1 MGP_CBAJ_G0027584.1 mouse_genomes_project 3 148121560 148129371 + Manba protein_coding processed_transcript MGP_CBAJ_T0063524.1 MGP_CBAJ_G0027584.1 mouse_genomes_project 3 148123385 148131367 + Manba protein_coding processed_transcript MGP_CBAJ_T0063525.1 MGP_CBAJ_G0027584.1 mouse_genomes_project 3 148123456 148137836 + Manba protein_coding processed_transcript MGP_CBAJ_T0063526.1 MGP_CBAJ_G0027584.1 mouse_genomes_project 3 148137796 148142149 + Manba protein_coding processed_transcript MGP_CBAJ_T0060300.1 MGP_CBAJ_G0026879.1 mouse_genomes_project 3 42435894 42561721 - MGP_CBAJ_P0060300 Sclt1 protein_coding protein_coding MGP_CBAJ_T0060301.1 MGP_CBAJ_G0026879.1 mouse_genomes_project 3 42438625 42561688 - MGP_CBAJ_P0060301 Sclt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060302.1 MGP_CBAJ_G0026879.1 mouse_genomes_project 3 42438625 42561235 - MGP_CBAJ_P0060302 Sclt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060303.1 MGP_CBAJ_G0026879.1 mouse_genomes_project 3 42438789 42441870 - Sclt1 protein_coding retained_intron MGP_CBAJ_T0060304.1 MGP_CBAJ_G0026879.1 mouse_genomes_project 3 42441146 42491160 - Sclt1 protein_coding retained_intron MGP_CBAJ_T0060305.1 MGP_CBAJ_G0026879.1 mouse_genomes_project 3 42471120 42477890 - MGP_CBAJ_P0060305 Sclt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060306.1 MGP_CBAJ_G0026879.1 mouse_genomes_project 3 42491668 42538106 - Sclt1 protein_coding retained_intron MGP_CBAJ_T0060307.1 MGP_CBAJ_G0026879.1 mouse_genomes_project 3 42560725 42561612 - Sclt1 protein_coding retained_intron MGP_CBAJ_T0001331.1 MGP_CBAJ_G0001257.1 mouse_genomes_project 3 157233059 157239101 + TEC TEC MGP_CBAJ_T0001184.1 MGP_CBAJ_G0001111.1 mouse_genomes_project 3 58809016 58812632 - TEC TEC MGP_CBAJ_T0013929.1 MGP_CBAJ_G0012041.1 mouse_genomes_project 3 76483790 76484295 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0059663.1 MGP_CBAJ_G0026751.1 mouse_genomes_project 3 7790987 7795066 - MGP_CBAJ_P0059663 Pmp2 protein_coding protein_coding MGP_CBAJ_T0001128.1 MGP_CBAJ_G0001057.1 mouse_genomes_project 3 42585098 42588293 + TEC TEC MGP_CBAJ_T0063718.1 MGP_CBAJ_G0027625.1 mouse_genomes_project 3 157800682 157814485 - MGP_CBAJ_P0063718 Lmo4 protein_coding protein_coding MGP_CBAJ_T0063719.1 MGP_CBAJ_G0027625.1 mouse_genomes_project 3 157800682 157817307 - MGP_CBAJ_P0063719 Lmo4 protein_coding protein_coding MGP_CBAJ_T0063720.1 MGP_CBAJ_G0027625.1 mouse_genomes_project 3 157800784 157814421 - MGP_CBAJ_P0063720 Lmo4 protein_coding protein_coding MGP_CBAJ_T0063721.1 MGP_CBAJ_G0027625.1 mouse_genomes_project 3 157800835 157817307 - MGP_CBAJ_P0063721 Lmo4 protein_coding protein_coding MGP_CBAJ_T0063722.1 MGP_CBAJ_G0027625.1 mouse_genomes_project 3 157801214 157806971 - Lmo4 protein_coding retained_intron MGP_CBAJ_T0063723.1 MGP_CBAJ_G0027625.1 mouse_genomes_project 3 157806140 157815052 - MGP_CBAJ_P0063723 Lmo4 protein_coding protein_coding MGP_CBAJ_T0063724.1 MGP_CBAJ_G0027625.1 mouse_genomes_project 3 157812871 157817267 - Lmo4 protein_coding retained_intron MGP_CBAJ_T0063725.1 MGP_CBAJ_G0027625.1 mouse_genomes_project 3 157813711 157814389 - Lmo4 protein_coding retained_intron MGP_CBAJ_T0013850.1 MGP_CBAJ_G0011962.1 mouse_genomes_project 3 52291265 52291854 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013964.1 MGP_CBAJ_G0012076.1 mouse_genomes_project 3 92497274 92497645 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001152.1 MGP_CBAJ_G0001081.1 mouse_genomes_project 3 53674948 53677057 - TEC TEC MGP_CBAJ_T0063064.1 MGP_CBAJ_G0027503.1 mouse_genomes_project 3 132118029 132134111 - MGP_CBAJ_P0063064 Rwdd3 protein_coding protein_coding MGP_CBAJ_T0063065.1 MGP_CBAJ_G0027503.1 mouse_genomes_project 3 132118031 132119452 - Rwdd3 protein_coding retained_intron MGP_CBAJ_T0063066.1 MGP_CBAJ_G0027503.1 mouse_genomes_project 3 132118474 132121490 - MGP_CBAJ_P0063066 Rwdd3 protein_coding protein_coding MGP_CBAJ_T0063067.1 MGP_CBAJ_G0027503.1 mouse_genomes_project 3 132118477 132134104 - MGP_CBAJ_P0063067 Rwdd3 protein_coding protein_coding MGP_CBAJ_T0063068.1 MGP_CBAJ_G0027503.1 mouse_genomes_project 3 132118496 132134110 - MGP_CBAJ_P0063068 Rwdd3 protein_coding protein_coding MGP_CBAJ_T0063069.1 MGP_CBAJ_G0027503.1 mouse_genomes_project 3 132118570 132134110 - MGP_CBAJ_P0063069 Rwdd3 protein_coding protein_coding MGP_CBAJ_T0063070.1 MGP_CBAJ_G0027503.1 mouse_genomes_project 3 132118909 132134111 - MGP_CBAJ_P0063070 Rwdd3 protein_coding protein_coding MGP_CBAJ_T0063071.1 MGP_CBAJ_G0027503.1 mouse_genomes_project 3 132120646 132134111 - Rwdd3 protein_coding retained_intron MGP_CBAJ_T0063072.1 MGP_CBAJ_G0027503.1 mouse_genomes_project 3 132131585 132134110 - Rwdd3 protein_coding retained_intron MGP_CBAJ_T0101315.1 MGP_CBAJ_G0039416.1 mouse_genomes_project 3 62827291 62903880 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101316.1 MGP_CBAJ_G0039416.1 mouse_genomes_project 3 62877494 62912105 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0004190.1 MGP_CBAJ_G0003683.1 mouse_genomes_project 3 94681334 94694178 - antisense antisense MGP_CBAJ_T0004191.1 MGP_CBAJ_G0003683.1 mouse_genomes_project 3 94681334 94694271 - antisense antisense MGP_CBAJ_T0004192.1 MGP_CBAJ_G0003683.1 mouse_genomes_project 3 94681787 94694192 - antisense antisense MGP_CBAJ_T0100497.1 MGP_CBAJ_G0038752.1 mouse_genomes_project 3 158230944 158231072 - Gm24406 snoRNA snoRNA MGP_CBAJ_T0001160.1 MGP_CBAJ_G0001088.1 mouse_genomes_project 3 54020822 54023666 - TEC TEC MGP_CBAJ_T0059754.1 MGP_CBAJ_G0026783.1 mouse_genomes_project 3 17850176 17947713 - MGP_CBAJ_P0059754 Pde7a protein_coding protein_coding MGP_CBAJ_T0059755.1 MGP_CBAJ_G0026783.1 mouse_genomes_project 3 17851747 17893044 - MGP_CBAJ_P0059755 Pde7a protein_coding protein_coding MGP_CBAJ_T0059756.1 MGP_CBAJ_G0026783.1 mouse_genomes_project 3 17854450 17857094 - Pde7a protein_coding retained_intron MGP_CBAJ_T0059757.1 MGP_CBAJ_G0026783.1 mouse_genomes_project 3 17854787 17860596 - Pde7a protein_coding processed_transcript MGP_CBAJ_T0059758.1 MGP_CBAJ_G0026783.1 mouse_genomes_project 3 17857354 17888277 - MGP_CBAJ_P0059758 Pde7a protein_coding nonsense_mediated_decay MGP_CBAJ_T0059759.1 MGP_CBAJ_G0026783.1 mouse_genomes_project 3 17857426 17863496 - Pde7a protein_coding retained_intron MGP_CBAJ_T0059760.1 MGP_CBAJ_G0026783.1 mouse_genomes_project 3 17860871 17947444 - MGP_CBAJ_P0059760 Pde7a protein_coding nonsense_mediated_decay MGP_CBAJ_T0059761.1 MGP_CBAJ_G0026783.1 mouse_genomes_project 3 17863447 17893001 - MGP_CBAJ_P0059761 Pde7a protein_coding protein_coding MGP_CBAJ_T0059762.1 MGP_CBAJ_G0026783.1 mouse_genomes_project 3 17884729 17947696 - Pde7a protein_coding retained_intron MGP_CBAJ_T0059763.1 MGP_CBAJ_G0026783.1 mouse_genomes_project 3 17884827 17947295 - Pde7a protein_coding processed_transcript MGP_CBAJ_T0010413.1 MGP_CBAJ_G0008551.1 mouse_genomes_project 3 105957428 105957482 - Mir7225 miRNA miRNA MGP_CBAJ_T0004324.1 MGP_CBAJ_G0003769.1 mouse_genomes_project 3 168903373 168907131 + Gm43400 antisense antisense MGP_CBAJ_T0013872.1 MGP_CBAJ_G0011984.1 mouse_genomes_project 3 60660216 60660712 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007397.1 MGP_CBAJ_G0006055.1 mouse_genomes_project 3 34715157 34722096 - Gm42695 lincRNA lincRNA MGP_CBAJ_T0014070.1 MGP_CBAJ_G0012182.1 mouse_genomes_project 3 123148212 123149043 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099228.1 MGP_CBAJ_G0037483.1 mouse_genomes_project 3 160423887 160423990 - Gm22078 snRNA snRNA MGP_CBAJ_T0013757.1 MGP_CBAJ_G0011869.1 mouse_genomes_project 3 17082593 17082994 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010431.1 MGP_CBAJ_G0008569.1 mouse_genomes_project 3 146674975 146675054 - Mir1895 miRNA miRNA MGP_CBAJ_T0062606.1 MGP_CBAJ_G0027398.1 mouse_genomes_project 3 115007268 115043998 + MGP_CBAJ_P0062606 Adora3 protein_coding protein_coding MGP_CBAJ_T0062611.1 MGP_CBAJ_G0027398.1 mouse_genomes_project 3 115040054 115044571 + MGP_CBAJ_P0062611 Adora3 protein_coding protein_coding MGP_CBAJ_T0062613.1 MGP_CBAJ_G0027398.1 mouse_genomes_project 3 115040328 115042001 + Adora3 protein_coding retained_intron MGP_CBAJ_T0011415.1 MGP_CBAJ_G0009553.1 mouse_genomes_project 3 88630344 88630586 - Gm22038 misc_RNA misc_RNA MGP_CBAJ_T0013884.1 MGP_CBAJ_G0011996.1 mouse_genomes_project 3 63521919 63522655 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060533.1 MGP_CBAJ_G0026923.1 mouse_genomes_project 3 60481652 60516549 - MGP_CBAJ_P0060533 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060534.1 MGP_CBAJ_G0026923.1 mouse_genomes_project 3 60481696 60516096 - MGP_CBAJ_P0060534 protein_coding unknown_likely_coding MGP_CBAJ_T0060535.1 MGP_CBAJ_G0026923.1 mouse_genomes_project 3 60491974 60516285 - MGP_CBAJ_P0060535 protein_coding protein_coding MGP_CBAJ_T0060536.1 MGP_CBAJ_G0026923.1 mouse_genomes_project 3 60493827 60516287 - MGP_CBAJ_P0060536 protein_coding protein_coding MGP_CBAJ_T0014021.1 MGP_CBAJ_G0012133.1 mouse_genomes_project 3 108862877 108863894 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014022.1 MGP_CBAJ_G0012134.1 mouse_genomes_project 3 109150958 109151249 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004155.1 MGP_CBAJ_G0003655.1 mouse_genomes_project 3 46680836 46707678 - 1700027H10Rik antisense antisense MGP_CBAJ_T0001179.1 MGP_CBAJ_G0001106.1 mouse_genomes_project 3 58130243 58132261 + TEC TEC MGP_CBAJ_T0063614.1 MGP_CBAJ_G0027605.1 mouse_genomes_project 3 151199509 151216809 + MGP_CBAJ_P0063614 Adh6a protein_coding protein_coding MGP_CBAJ_T0063615.1 MGP_CBAJ_G0027605.1 mouse_genomes_project 3 151199509 151217405 + MGP_CBAJ_P0063615 Adh6a protein_coding protein_coding MGP_CBAJ_T0001287.1 MGP_CBAJ_G0001214.1 mouse_genomes_project 3 138580162 138581202 - TEC TEC MGP_CBAJ_T0014082.1 MGP_CBAJ_G0012194.1 mouse_genomes_project 3 127521175 127521905 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100439.1 MGP_CBAJ_G0038694.1 mouse_genomes_project 3 38325699 38325808 - Gm26404 snoRNA snoRNA MGP_CBAJ_T0013871.1 MGP_CBAJ_G0011983.1 mouse_genomes_project 3 60546435 60546912 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0059811.1 MGP_CBAJ_G0026793.1 mouse_genomes_project 3 18995035 18997732 - Cpb1 protein_coding retained_intron MGP_CBAJ_T0059812.1 MGP_CBAJ_G0026793.1 mouse_genomes_project 3 18995060 19028676 - MGP_CBAJ_P0059812 Cpb1 protein_coding protein_coding MGP_CBAJ_T0059813.1 MGP_CBAJ_G0026793.1 mouse_genomes_project 3 19015338 19017593 - Cpb1 protein_coding processed_transcript MGP_CBAJ_T0013705.1 MGP_CBAJ_G0011817.1 mouse_genomes_project 3 729433 729752 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098202.1 MGP_CBAJ_G0036475.1 mouse_genomes_project 3 95345392 95345520 + Gm25820 scaRNA scaRNA MGP_CBAJ_T0062395.1 MGP_CBAJ_G0027357.1 mouse_genomes_project 3 110868127 110921496 - MGP_CBAJ_P0062395 Vangl1 protein_coding protein_coding MGP_CBAJ_T0062396.1 MGP_CBAJ_G0027357.1 mouse_genomes_project 3 110872757 110884006 - MGP_CBAJ_P0062396 Vangl1 protein_coding protein_coding MGP_CBAJ_T0062397.1 MGP_CBAJ_G0027357.1 mouse_genomes_project 3 110872757 110920766 - MGP_CBAJ_P0062397 Vangl1 protein_coding protein_coding MGP_CBAJ_T0062398.1 MGP_CBAJ_G0027357.1 mouse_genomes_project 3 110872810 110921331 - MGP_CBAJ_P0062398 Vangl1 protein_coding protein_coding MGP_CBAJ_T0062399.1 MGP_CBAJ_G0027357.1 mouse_genomes_project 3 110878254 110884049 - Vangl1 protein_coding retained_intron MGP_CBAJ_T0062400.1 MGP_CBAJ_G0027357.1 mouse_genomes_project 3 110878431 110883017 - Vangl1 protein_coding processed_transcript MGP_CBAJ_T0062401.1 MGP_CBAJ_G0027357.1 mouse_genomes_project 3 110901028 110914585 - MGP_CBAJ_P0062401 Vangl1 protein_coding protein_coding MGP_CBAJ_T0062402.1 MGP_CBAJ_G0027357.1 mouse_genomes_project 3 110913502 110920684 - MGP_CBAJ_P0062402 Vangl1 protein_coding protein_coding MGP_CBAJ_T0014147.1 MGP_CBAJ_G0012259.1 mouse_genomes_project 3 151416226 151416452 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0063325.1 MGP_CBAJ_G0027547.1 mouse_genomes_project 3 141697334 141781703 - MGP_CBAJ_P0063325 Egf protein_coding protein_coding MGP_CBAJ_T0063326.1 MGP_CBAJ_G0027547.1 mouse_genomes_project 3 141697347 141749272 - MGP_CBAJ_P0063326 Egf protein_coding protein_coding MGP_CBAJ_T0063327.1 MGP_CBAJ_G0027547.1 mouse_genomes_project 3 141697349 141749262 - MGP_CBAJ_P0063327 Egf protein_coding protein_coding MGP_CBAJ_T0063328.1 MGP_CBAJ_G0027547.1 mouse_genomes_project 3 141698106 141701356 - Egf protein_coding retained_intron MGP_CBAJ_T0063329.1 MGP_CBAJ_G0027547.1 mouse_genomes_project 3 141706083 141714980 - Egf protein_coding retained_intron MGP_CBAJ_T0063330.1 MGP_CBAJ_G0027547.1 mouse_genomes_project 3 141714261 141717171 - Egf protein_coding retained_intron MGP_CBAJ_T0063331.1 MGP_CBAJ_G0027547.1 mouse_genomes_project 3 141721354 141749271 - MGP_CBAJ_P0063331 Egf protein_coding nonsense_mediated_decay MGP_CBAJ_T0063332.1 MGP_CBAJ_G0027547.1 mouse_genomes_project 3 141759633 141781703 - Egf protein_coding retained_intron MGP_CBAJ_T0063333.1 MGP_CBAJ_G0027547.1 mouse_genomes_project 3 141761105 141781703 - Egf protein_coding processed_transcript MGP_CBAJ_T0017718.1 MGP_CBAJ_G0015256.1 mouse_genomes_project 3 108875695 108878156 + 4930406D18Rik processed_transcript retained_intron MGP_CBAJ_T0017719.1 MGP_CBAJ_G0015256.1 mouse_genomes_project 3 108875729 108886512 + 4930406D18Rik processed_transcript lincRNA MGP_CBAJ_T0014148.1 MGP_CBAJ_G0012260.1 mouse_genomes_project 3 151427705 151428074 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060747.1 MGP_CBAJ_G0026973.1 mouse_genomes_project 3 71262879 71268796 - MGP_CBAJ_P0060747 Lxn protein_coding protein_coding MGP_CBAJ_T0060748.1 MGP_CBAJ_G0026973.1 mouse_genomes_project 3 71262882 71266509 - Lxn protein_coding retained_intron MGP_CBAJ_T0060749.1 MGP_CBAJ_G0026973.1 mouse_genomes_project 3 71265940 71268652 - Lxn protein_coding retained_intron MGP_CBAJ_T0007434.1 MGP_CBAJ_G0006081.1 mouse_genomes_project 3 50584694 50597113 - Gm37190 lincRNA lincRNA MGP_CBAJ_T0007651.1 MGP_CBAJ_G0006252.1 mouse_genomes_project 3 157901868 157902964 + Gm43446 lincRNA lincRNA MGP_CBAJ_T0064055.1 MGP_CBAJ_G0027681.1 mouse_genomes_project 3 169753198 169864789 + MGP_CBAJ_P0064055 protein_coding protein_coding MGP_CBAJ_T0064056.1 MGP_CBAJ_G0027681.1 mouse_genomes_project 3 169800573 169846015 + MGP_CBAJ_P0064056 protein_coding protein_coding MGP_CBAJ_T0064057.1 MGP_CBAJ_G0027681.1 mouse_genomes_project 3 169801330 169807039 + protein_coding processed_transcript MGP_CBAJ_T0064058.1 MGP_CBAJ_G0027681.1 mouse_genomes_project 3 169861328 169864788 + MGP_CBAJ_P0064058 protein_coding protein_coding MGP_CBAJ_T0101844.1 MGP_CBAJ_G0039875.1 mouse_genomes_project 3 62640612 62660493 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0007550.1 MGP_CBAJ_G0006170.1 mouse_genomes_project 3 113673501 113676302 - Gm29561 lincRNA lincRNA MGP_CBAJ_T0061424.1 MGP_CBAJ_G0027112.1 mouse_genomes_project 3 95981767 95993301 + MGP_CBAJ_P0061424 Thbs3 protein_coding protein_coding MGP_CBAJ_T0061425.1 MGP_CBAJ_G0027112.1 mouse_genomes_project 3 95981792 95984660 + MGP_CBAJ_P0061425 Thbs3 protein_coding protein_coding MGP_CBAJ_T0061426.1 MGP_CBAJ_G0027112.1 mouse_genomes_project 3 95981814 95993301 + Thbs3 protein_coding retained_intron MGP_CBAJ_T0061427.1 MGP_CBAJ_G0027112.1 mouse_genomes_project 3 95981820 95993268 + MGP_CBAJ_P0061427 Thbs3 protein_coding protein_coding MGP_CBAJ_T0061428.1 MGP_CBAJ_G0027112.1 mouse_genomes_project 3 95983993 95985664 + Thbs3 protein_coding retained_intron MGP_CBAJ_T0061429.1 MGP_CBAJ_G0027112.1 mouse_genomes_project 3 95987528 95989630 + Thbs3 protein_coding processed_transcript MGP_CBAJ_T0061431.1 MGP_CBAJ_G0027112.1 mouse_genomes_project 3 95990594 95992016 + Thbs3 protein_coding retained_intron MGP_CBAJ_T0061432.1 MGP_CBAJ_G0027112.1 mouse_genomes_project 3 95990743 95993167 + MGP_CBAJ_P0061432 Thbs3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061433.1 MGP_CBAJ_G0027112.1 mouse_genomes_project 3 95990784 95991884 + Thbs3 protein_coding retained_intron MGP_CBAJ_T0061434.1 MGP_CBAJ_G0027112.1 mouse_genomes_project 3 95991635 95993027 + Thbs3 protein_coding retained_intron MGP_CBAJ_T0061435.1 MGP_CBAJ_G0027112.1 mouse_genomes_project 3 95992713 95993250 + Thbs3 protein_coding retained_intron MGP_CBAJ_T0062447.1 MGP_CBAJ_G0027365.1 mouse_genomes_project 3 111861091 111871264 + MGP_CBAJ_P0062447 Nras protein_coding protein_coding MGP_CBAJ_T0062448.1 MGP_CBAJ_G0027365.1 mouse_genomes_project 3 111861154 111865341 + MGP_CBAJ_P0062448 Nras protein_coding nonsense_mediated_decay MGP_CBAJ_T0062449.1 MGP_CBAJ_G0027365.1 mouse_genomes_project 3 111861173 111867207 + MGP_CBAJ_P0062449 Nras protein_coding protein_coding MGP_CBAJ_T0062450.1 MGP_CBAJ_G0027365.1 mouse_genomes_project 3 111861400 111863119 + MGP_CBAJ_P0062450 Nras protein_coding protein_coding MGP_CBAJ_T0062451.1 MGP_CBAJ_G0027365.1 mouse_genomes_project 3 111861402 111866237 + MGP_CBAJ_P0062451 Nras protein_coding protein_coding MGP_CBAJ_T0062452.1 MGP_CBAJ_G0027365.1 mouse_genomes_project 3 111861549 111865340 + MGP_CBAJ_P0062452 Nras protein_coding protein_coding MGP_CBAJ_T0062453.1 MGP_CBAJ_G0027365.1 mouse_genomes_project 3 111861709 111869839 + MGP_CBAJ_P0062453 Nras protein_coding nonsense_mediated_decay MGP_CBAJ_T0062454.1 MGP_CBAJ_G0027365.1 mouse_genomes_project 3 111861709 111871256 + MGP_CBAJ_P0062454 Nras protein_coding nonsense_mediated_decay MGP_CBAJ_T0062455.1 MGP_CBAJ_G0027365.1 mouse_genomes_project 3 111861794 111865789 + Nras protein_coding retained_intron MGP_CBAJ_T0004205.1 MGP_CBAJ_G0003693.1 mouse_genomes_project 3 99350628 99356754 + Gm43735 antisense antisense MGP_CBAJ_T0013913.1 MGP_CBAJ_G0012025.1 mouse_genomes_project 3 72791664 72792823 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007466.1 MGP_CBAJ_G0006106.1 mouse_genomes_project 3 72697113 72698629 - 4930535E02Rik lincRNA lincRNA MGP_CBAJ_T0061542.1 MGP_CBAJ_G0027137.1 mouse_genomes_project 3 96722713 96784193 - MGP_CBAJ_P0061542 Il6ra protein_coding protein_coding MGP_CBAJ_T0061543.1 MGP_CBAJ_G0027137.1 mouse_genomes_project 3 96728980 96784159 - MGP_CBAJ_P0061543 Il6ra protein_coding protein_coding MGP_CBAJ_T0013796.1 MGP_CBAJ_G0011908.1 mouse_genomes_project 3 35834880 35835316 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001115.1 MGP_CBAJ_G0001044.1 mouse_genomes_project 3 37984705 37990509 + TEC TEC MGP_CBAJ_T0062790.1 MGP_CBAJ_G0027447.1 mouse_genomes_project 3 117709487 117718200 - MGP_CBAJ_P0062790 Atxn7l2 protein_coding protein_coding MGP_CBAJ_T0062791.1 MGP_CBAJ_G0027447.1 mouse_genomes_project 3 117709493 117715840 - Atxn7l2 protein_coding retained_intron MGP_CBAJ_T0062792.1 MGP_CBAJ_G0027447.1 mouse_genomes_project 3 117709624 117717707 - MGP_CBAJ_P0062792 Atxn7l2 protein_coding protein_coding MGP_CBAJ_T0062793.1 MGP_CBAJ_G0027447.1 mouse_genomes_project 3 117714347 117716837 - MGP_CBAJ_P0062793 Atxn7l2 protein_coding protein_coding MGP_CBAJ_T0062794.1 MGP_CBAJ_G0027447.1 mouse_genomes_project 3 117716241 117717734 - Atxn7l2 protein_coding processed_transcript MGP_CBAJ_T0060613.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63674129 63808102 + MGP_CBAJ_P0060613 Mbnl1 protein_coding protein_coding MGP_CBAJ_T0060614.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63674341 63816329 + MGP_CBAJ_P0060614 Mbnl1 protein_coding protein_coding MGP_CBAJ_T0060615.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63674367 63676917 + Mbnl1 protein_coding retained_intron MGP_CBAJ_T0060616.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63674373 63835232 + MGP_CBAJ_P0060616 Mbnl1 protein_coding protein_coding MGP_CBAJ_T0060617.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63674376 63808087 + MGP_CBAJ_P0060617 Mbnl1 protein_coding protein_coding MGP_CBAJ_T0060618.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63698573 63759451 + Mbnl1 protein_coding processed_transcript MGP_CBAJ_T0060619.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63698858 63810439 + Mbnl1 protein_coding retained_intron MGP_CBAJ_T0060620.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63698875 63841336 + Mbnl1 protein_coding processed_transcript MGP_CBAJ_T0060621.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63698903 63759429 + Mbnl1 protein_coding processed_transcript MGP_CBAJ_T0060622.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63698903 63732087 + Mbnl1 protein_coding retained_intron MGP_CBAJ_T0060623.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63698916 63842104 + MGP_CBAJ_P0060623 Mbnl1 protein_coding protein_coding MGP_CBAJ_T0060624.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63728526 63729500 + Mbnl1 protein_coding processed_transcript MGP_CBAJ_T0060625.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63728619 63842043 + MGP_CBAJ_P0060625 Mbnl1 protein_coding protein_coding MGP_CBAJ_T0060626.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63729439 63842107 + MGP_CBAJ_P0060626 Mbnl1 protein_coding protein_coding MGP_CBAJ_T0060627.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63729439 63842107 + MGP_CBAJ_P0060627 Mbnl1 protein_coding protein_coding MGP_CBAJ_T0060628.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63730039 63833110 + Mbnl1 protein_coding retained_intron MGP_CBAJ_T0060629.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63730103 63838955 + Mbnl1 protein_coding processed_transcript MGP_CBAJ_T0060630.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63807978 63827481 + MGP_CBAJ_P0060630 Mbnl1 protein_coding protein_coding MGP_CBAJ_T0060631.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63808048 63840601 + MGP_CBAJ_P0060631 Mbnl1 protein_coding protein_coding MGP_CBAJ_T0060632.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63815883 63829852 + Mbnl1 protein_coding retained_intron MGP_CBAJ_T0060633.1 MGP_CBAJ_G0026946.1 mouse_genomes_project 3 63837051 63840317 + Mbnl1 protein_coding retained_intron MGP_CBAJ_T0061466.1 MGP_CBAJ_G0027120.1 mouse_genomes_project 3 96109463 96114102 - MGP_CBAJ_P0061466 Efna4 protein_coding protein_coding MGP_CBAJ_T0061730.1 MGP_CBAJ_G0027171.1 mouse_genomes_project 3 97668685 97682992 + MGP_CBAJ_P0061730 Pglyrp4 protein_coding protein_coding MGP_CBAJ_T0061731.1 MGP_CBAJ_G0027171.1 mouse_genomes_project 3 97668690 97681989 + MGP_CBAJ_P0061731 Pglyrp4 protein_coding protein_coding MGP_CBAJ_T0061732.1 MGP_CBAJ_G0027171.1 mouse_genomes_project 3 97679607 97682990 + Pglyrp4 protein_coding processed_transcript MGP_CBAJ_T0010410.1 MGP_CBAJ_G0008548.1 mouse_genomes_project 3 103006390 103006517 - Mir8099-1 miRNA miRNA MGP_CBAJ_T0013924.1 MGP_CBAJ_G0012036.1 mouse_genomes_project 3 75694759 75695215 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060953.1 MGP_CBAJ_G0027022.1 mouse_genomes_project 3 88738656 88749876 - MGP_CBAJ_P0060953 Lrat protein_coding protein_coding MGP_CBAJ_T0007565.1 MGP_CBAJ_G0006182.1 mouse_genomes_project 3 126062577 126064155 + Gm9889 lincRNA pseudogene MGP_CBAJ_T0007566.1 MGP_CBAJ_G0006182.1 mouse_genomes_project 3 126062577 126064156 + Gm9889 lincRNA lincRNA MGP_CBAJ_T0063218.1 MGP_CBAJ_G0027533.1 mouse_genomes_project 3 137898694 137984932 + MGP_CBAJ_P0063218 Arsj protein_coding protein_coding MGP_CBAJ_T0004154.1 MGP_CBAJ_G0003654.1 mouse_genomes_project 3 42371345 42372765 - Gm31266 antisense antisense MGP_CBAJ_T0007595.1 MGP_CBAJ_G0006204.1 mouse_genomes_project 3 140565963 140567981 - 4933424H11Rik lincRNA lincRNA MGP_CBAJ_T0098360.1 MGP_CBAJ_G0036626.1 mouse_genomes_project 3 113139125 113141555 - Gm43260 sense_intronic sense_intronic MGP_CBAJ_T0013954.1 MGP_CBAJ_G0012066.1 mouse_genomes_project 3 87238361 87239146 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004313.1 MGP_CBAJ_G0003761.1 mouse_genomes_project 3 159284071 159286131 - 9530034A14Rik antisense antisense MGP_CBAJ_T0060419.1 MGP_CBAJ_G0026901.1 mouse_genomes_project 3 56252525 56258393 - Ufm1 protein_coding retained_intron MGP_CBAJ_T0060420.1 MGP_CBAJ_G0026901.1 mouse_genomes_project 3 56252572 56258978 - MGP_CBAJ_P0060420 Ufm1 protein_coding protein_coding MGP_CBAJ_T0060421.1 MGP_CBAJ_G0026901.1 mouse_genomes_project 3 56252646 56258466 - MGP_CBAJ_P0060421 Ufm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060422.1 MGP_CBAJ_G0026901.1 mouse_genomes_project 3 56253514 56258470 - MGP_CBAJ_P0060422 Ufm1 protein_coding protein_coding MGP_CBAJ_T0060423.1 MGP_CBAJ_G0026901.1 mouse_genomes_project 3 56254319 56258466 - Ufm1 protein_coding retained_intron MGP_CBAJ_T0007472.1 MGP_CBAJ_G0006111.1 mouse_genomes_project 3 77954842 78116103 + Gm38353 lincRNA lincRNA MGP_CBAJ_T0100461.1 MGP_CBAJ_G0038716.1 mouse_genomes_project 3 92307299 92307421 + Gm25188 snoRNA snoRNA MGP_CBAJ_T0013814.1 MGP_CBAJ_G0011926.1 mouse_genomes_project 3 38772508 38772851 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098357.1 MGP_CBAJ_G0036623.1 mouse_genomes_project 3 113105207 113107117 - Gm43258 sense_intronic sense_intronic MGP_CBAJ_T0013973.1 MGP_CBAJ_G0012085.1 mouse_genomes_project 3 95861416 95861669 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0060847.1 MGP_CBAJ_G0027000.1 mouse_genomes_project 3 80842299 80931668 - MGP_CBAJ_P0060847 Golim4 protein_coding protein_coding MGP_CBAJ_T0060848.1 MGP_CBAJ_G0027000.1 mouse_genomes_project 3 80843398 80931688 - MGP_CBAJ_P0060848 Golim4 protein_coding protein_coding MGP_CBAJ_T0060849.1 MGP_CBAJ_G0027000.1 mouse_genomes_project 3 80843694 80846337 - Golim4 protein_coding retained_intron MGP_CBAJ_T0060850.1 MGP_CBAJ_G0027000.1 mouse_genomes_project 3 80844874 80931676 - MGP_CBAJ_P0060850 Golim4 protein_coding protein_coding MGP_CBAJ_T0060851.1 MGP_CBAJ_G0027000.1 mouse_genomes_project 3 80854059 80860247 - Golim4 protein_coding retained_intron MGP_CBAJ_T0060852.1 MGP_CBAJ_G0027000.1 mouse_genomes_project 3 80864014 80871602 - MGP_CBAJ_P0060852 Golim4 protein_coding protein_coding MGP_CBAJ_T0060853.1 MGP_CBAJ_G0027000.1 mouse_genomes_project 3 80868382 80931647 - Golim4 protein_coding retained_intron MGP_CBAJ_T0060854.1 MGP_CBAJ_G0027000.1 mouse_genomes_project 3 80929854 80931670 - Golim4 protein_coding retained_intron MGP_CBAJ_T0007439.1 MGP_CBAJ_G0006085.1 mouse_genomes_project 3 54312165 54407920 - Gm37202 lincRNA lincRNA MGP_CBAJ_T0001316.1 MGP_CBAJ_G0001242.1 mouse_genomes_project 3 145050689 145052656 + TEC TEC MGP_CBAJ_T0007534.1 MGP_CBAJ_G0006156.1 mouse_genomes_project 3 107372887 107376495 - 5730437C11Rik lincRNA lincRNA MGP_CBAJ_T0100478.1 MGP_CBAJ_G0038733.1 mouse_genomes_project 3 113159083 113159199 + Gm23077 snoRNA snoRNA MGP_CBAJ_T0060552.1 MGP_CBAJ_G0026926.1 mouse_genomes_project 3 61331414 61385244 + MGP_CBAJ_P0060552 Tsc22d2 protein_coding protein_coding MGP_CBAJ_T0060553.1 MGP_CBAJ_G0026926.1 mouse_genomes_project 3 61331419 61380181 + MGP_CBAJ_P0060553 Tsc22d2 protein_coding protein_coding MGP_CBAJ_T0060554.1 MGP_CBAJ_G0026926.1 mouse_genomes_project 3 61332577 61335599 + Tsc22d2 protein_coding retained_intron MGP_CBAJ_T0060555.1 MGP_CBAJ_G0026926.1 mouse_genomes_project 3 61334183 61378770 + MGP_CBAJ_P0060555 Tsc22d2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0001131.1 MGP_CBAJ_G0001060.1 mouse_genomes_project 3 45855971 45859297 + TEC TEC MGP_CBAJ_T0013867.1 MGP_CBAJ_G0011979.1 mouse_genomes_project 3 60029960 60030213 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063450.1 MGP_CBAJ_G0027573.1 mouse_genomes_project 3 145423839 145557927 - MGP_CBAJ_P0063450 protein_coding protein_coding MGP_CBAJ_T0063451.1 MGP_CBAJ_G0027573.1 mouse_genomes_project 3 145427993 145447588 - MGP_CBAJ_P0063451 protein_coding protein_coding MGP_CBAJ_T0063452.1 MGP_CBAJ_G0027573.1 mouse_genomes_project 3 145472140 145557927 - MGP_CBAJ_P0063452 protein_coding protein_coding MGP_CBAJ_T0063453.1 MGP_CBAJ_G0027573.1 mouse_genomes_project 3 145486931 145557987 - MGP_CBAJ_P0063453 protein_coding protein_coding MGP_CBAJ_T0010421.1 MGP_CBAJ_G0008559.1 mouse_genomes_project 3 129144977 129145087 + Gm24155 miRNA miRNA MGP_CBAJ_T0014144.1 MGP_CBAJ_G0012256.1 mouse_genomes_project 3 149720994 149721310 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061713.1 MGP_CBAJ_G0027163.1 mouse_genomes_project 3 97533482 97534744 + MGP_CBAJ_P0061713 S100a2 protein_coding protein_coding MGP_CBAJ_T0062164.1 MGP_CBAJ_G0027291.1 mouse_genomes_project 3 104266616 104267060 + MGP_CBAJ_P0062164 Hist2h2ab protein_coding protein_coding MGP_CBAJ_T0101868.1 MGP_CBAJ_G0039899.1 mouse_genomes_project 3 115349134 115350478 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0007519.1 MGP_CBAJ_G0006142.1 mouse_genomes_project 3 100175222 100175609 - Gm38201 lincRNA lincRNA MGP_CBAJ_T0007518.1 MGP_CBAJ_G0006141.1 mouse_genomes_project 3 99416914 99431103 + lincRNA lincRNA MGP_CBAJ_T0101875.1 MGP_CBAJ_G0039906.1 mouse_genomes_project 3 123239602 123250456 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0060473.1 MGP_CBAJ_G0026911.1 mouse_genomes_project 3 57595864 57601008 - MGP_CBAJ_P0060473 Ccna1 protein_coding protein_coding MGP_CBAJ_T0060474.1 MGP_CBAJ_G0026911.1 mouse_genomes_project 3 57595870 57605396 - MGP_CBAJ_P0060474 Ccna1 protein_coding protein_coding MGP_CBAJ_T0060475.1 MGP_CBAJ_G0026911.1 mouse_genomes_project 3 57595872 57605383 - MGP_CBAJ_P0060475 Ccna1 protein_coding protein_coding MGP_CBAJ_T0060476.1 MGP_CBAJ_G0026911.1 mouse_genomes_project 3 57595873 57605842 - MGP_CBAJ_P0060476 Ccna1 protein_coding protein_coding MGP_CBAJ_T0060477.1 MGP_CBAJ_G0026911.1 mouse_genomes_project 3 57600955 57605823 - MGP_CBAJ_P0060477 Ccna1 protein_coding protein_coding MGP_CBAJ_T0060478.1 MGP_CBAJ_G0026911.1 mouse_genomes_project 3 57601349 57605378 - MGP_CBAJ_P0060478 Ccna1 protein_coding protein_coding MGP_CBAJ_T0098345.1 MGP_CBAJ_G0036611.1 mouse_genomes_project 3 112208646 112210887 + Gm43061 sense_intronic sense_intronic MGP_CBAJ_T0099210.1 MGP_CBAJ_G0037465.1 mouse_genomes_project 3 118044507 118044630 + Gm23336 snRNA snRNA MGP_CBAJ_T0011408.1 MGP_CBAJ_G0009546.1 mouse_genomes_project 3 34799241 34799513 + Mir1897 misc_RNA misc_RNA MGP_CBAJ_T0004328.1 MGP_CBAJ_G0003773.1 mouse_genomes_project 3 173335560 173337155 + 1810013D15Rik antisense antisense MGP_CBAJ_T0004329.1 MGP_CBAJ_G0003773.1 mouse_genomes_project 3 173335822 173350525 + 1810013D15Rik antisense antisense MGP_CBAJ_T0063693.1 MGP_CBAJ_G0027621.1 mouse_genomes_project 3 156165981 156186369 + MGP_CBAJ_P0063693 Gbp2 protein_coding protein_coding MGP_CBAJ_T0063694.1 MGP_CBAJ_G0027621.1 mouse_genomes_project 3 156166014 156178924 + MGP_CBAJ_P0063694 Gbp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059689.1 MGP_CBAJ_G0026760.1 mouse_genomes_project 3 8008262 8043494 + MGP_CBAJ_P0059689 Chmp4c protein_coding protein_coding MGP_CBAJ_T0059690.1 MGP_CBAJ_G0026760.1 mouse_genomes_project 3 8008313 8081661 + MGP_CBAJ_P0059690 Chmp4c protein_coding nonsense_mediated_decay MGP_CBAJ_T0001185.1 MGP_CBAJ_G0001112.1 mouse_genomes_project 3 60459205 60463160 - TEC TEC MGP_CBAJ_T0004319.1 MGP_CBAJ_G0003765.1 mouse_genomes_project 3 167511515 167526025 + AI115009 antisense antisense MGP_CBAJ_T0063645.1 MGP_CBAJ_G0027611.1 mouse_genomes_project 3 151893338 152060786 - MGP_CBAJ_P0063645 Rap1gds1 protein_coding protein_coding MGP_CBAJ_T0063646.1 MGP_CBAJ_G0027611.1 mouse_genomes_project 3 151893342 152060722 - MGP_CBAJ_P0063646 Rap1gds1 protein_coding protein_coding MGP_CBAJ_T0063647.1 MGP_CBAJ_G0027611.1 mouse_genomes_project 3 151893346 152060655 - MGP_CBAJ_P0063647 Rap1gds1 protein_coding protein_coding MGP_CBAJ_T0063648.1 MGP_CBAJ_G0027611.1 mouse_genomes_project 3 151909588 152060725 - MGP_CBAJ_P0063648 Rap1gds1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063649.1 MGP_CBAJ_G0027611.1 mouse_genomes_project 3 151909591 152060733 - MGP_CBAJ_P0063649 Rap1gds1 protein_coding protein_coding MGP_CBAJ_T0063650.1 MGP_CBAJ_G0027611.1 mouse_genomes_project 3 151925616 151955739 - Rap1gds1 protein_coding retained_intron MGP_CBAJ_T0063651.1 MGP_CBAJ_G0027611.1 mouse_genomes_project 3 151997161 152060778 - Rap1gds1 protein_coding retained_intron MGP_CBAJ_T0063652.1 MGP_CBAJ_G0027611.1 mouse_genomes_project 3 152004466 152060383 - Rap1gds1 protein_coding processed_transcript MGP_CBAJ_T0063653.1 MGP_CBAJ_G0027611.1 mouse_genomes_project 3 152032492 152060725 - Rap1gds1 protein_coding retained_intron MGP_CBAJ_T0100440.1 MGP_CBAJ_G0038695.1 mouse_genomes_project 3 38543043 38543174 - Gm22899 snoRNA snoRNA MGP_CBAJ_T0061733.1 MGP_CBAJ_G0027172.1 mouse_genomes_project 3 97857341 97859272 - MGP_CBAJ_P0061733 Gm5849 protein_coding protein_coding MGP_CBAJ_T0062600.1 MGP_CBAJ_G0027395.1 mouse_genomes_project 3 114795408 114804654 - MGP_CBAJ_P0062600 Ddx20 protein_coding protein_coding MGP_CBAJ_T0062601.1 MGP_CBAJ_G0027395.1 mouse_genomes_project 3 114796758 114804532 - MGP_CBAJ_P0062601 Ddx20 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062602.1 MGP_CBAJ_G0027395.1 mouse_genomes_project 3 114798627 114804524 - Ddx20 protein_coding retained_intron MGP_CBAJ_T0098346.1 MGP_CBAJ_G0036612.1 mouse_genomes_project 3 112516624 112517884 + Gm43066 sense_intronic sense_intronic MGP_CBAJ_T0013951.1 MGP_CBAJ_G0012063.1 mouse_genomes_project 3 85583290 85584370 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013725.1 MGP_CBAJ_G0011837.1 mouse_genomes_project 3 7164482 7164865 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004314.1 MGP_CBAJ_G0003762.1 mouse_genomes_project 3 160707385 160717157 + Gm16325 antisense antisense MGP_CBAJ_T0004315.1 MGP_CBAJ_G0003762.1 mouse_genomes_project 3 160714050 160714954 + Gm16325 antisense antisense MGP_CBAJ_T0099160.1 MGP_CBAJ_G0037415.1 mouse_genomes_project 3 47341935 47342053 + Gm23337 snRNA snRNA MGP_CBAJ_T0017714.1 MGP_CBAJ_G0015254.1 mouse_genomes_project 3 102842310 102843762 + 4930481B07Rik processed_transcript lincRNA MGP_CBAJ_T0017715.1 MGP_CBAJ_G0015254.1 mouse_genomes_project 3 102842934 102846838 + 4930481B07Rik processed_transcript processed_transcript MGP_CBAJ_T0061752.1 MGP_CBAJ_G0027190.1 mouse_genomes_project 3 99844741 99846748 - MGP_CBAJ_P0061752 2310046K23Rik protein_coding protein_coding MGP_CBAJ_T0100470.1 MGP_CBAJ_G0038725.1 mouse_genomes_project 3 97031859 97031991 + Gm23723 snoRNA snoRNA MGP_CBAJ_T0061517.1 MGP_CBAJ_G0027130.1 mouse_genomes_project 3 96231167 96245411 + MGP_CBAJ_P0061517 Pbxip1 protein_coding protein_coding MGP_CBAJ_T0061518.1 MGP_CBAJ_G0027130.1 mouse_genomes_project 3 96231173 96239989 + Pbxip1 protein_coding processed_transcript MGP_CBAJ_T0061519.1 MGP_CBAJ_G0027130.1 mouse_genomes_project 3 96231176 96240628 + MGP_CBAJ_P0061519 Pbxip1 protein_coding protein_coding MGP_CBAJ_T0061520.1 MGP_CBAJ_G0027130.1 mouse_genomes_project 3 96231215 96239937 + MGP_CBAJ_P0061520 Pbxip1 protein_coding protein_coding MGP_CBAJ_T0061521.1 MGP_CBAJ_G0027130.1 mouse_genomes_project 3 96231217 96239981 + MGP_CBAJ_P0061521 Pbxip1 protein_coding protein_coding MGP_CBAJ_T0060875.1 MGP_CBAJ_G0027005.1 mouse_genomes_project 3 85040393 85055144 + Ppid protein_coding retained_intron MGP_CBAJ_T0060876.1 MGP_CBAJ_G0027005.1 mouse_genomes_project 3 85040416 85055518 + MGP_CBAJ_P0060876 Ppid protein_coding protein_coding MGP_CBAJ_T0060877.1 MGP_CBAJ_G0027005.1 mouse_genomes_project 3 85040539 85044359 + Ppid protein_coding processed_transcript MGP_CBAJ_T0060878.1 MGP_CBAJ_G0027005.1 mouse_genomes_project 3 85042740 85046812 + MGP_CBAJ_P0060878 Ppid protein_coding nonsense_mediated_decay MGP_CBAJ_T0060879.1 MGP_CBAJ_G0027005.1 mouse_genomes_project 3 85045207 85047239 + Ppid protein_coding retained_intron MGP_CBAJ_T0060880.1 MGP_CBAJ_G0027005.1 mouse_genomes_project 3 85047759 85054196 + Ppid protein_coding retained_intron MGP_CBAJ_T0064059.1 MGP_CBAJ_G0027682.1 mouse_genomes_project 3 169885769 170173029 - MGP_CBAJ_P0064059 Tnni3k protein_coding nonsense_mediated_decay MGP_CBAJ_T0064060.1 MGP_CBAJ_G0027682.1 mouse_genomes_project 3 169885777 170173029 - MGP_CBAJ_P0064060 Tnni3k protein_coding protein_coding MGP_CBAJ_T0064061.1 MGP_CBAJ_G0027682.1 mouse_genomes_project 3 170146951 170172972 - Tnni3k protein_coding retained_intron MGP_CBAJ_T0014107.1 MGP_CBAJ_G0012219.1 mouse_genomes_project 3 136457103 136458115 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001275.1 MGP_CBAJ_G0001202.1 mouse_genomes_project 3 134961522 134963814 - TEC TEC MGP_CBAJ_T0001311.1 MGP_CBAJ_G0001237.1 mouse_genomes_project 3 143010725 143011436 + TEC TEC MGP_CBAJ_T0013831.1 MGP_CBAJ_G0011943.1 mouse_genomes_project 3 45667488 45667897 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060899.1 MGP_CBAJ_G0027010.1 mouse_genomes_project 3 85360161 85427231 + MGP_CBAJ_P0060899 Fam198b protein_coding protein_coding MGP_CBAJ_T0060900.1 MGP_CBAJ_G0027010.1 mouse_genomes_project 3 85360225 85417512 + MGP_CBAJ_P0060900 Fam198b protein_coding protein_coding MGP_CBAJ_T0060901.1 MGP_CBAJ_G0027010.1 mouse_genomes_project 3 85360559 85361859 + MGP_CBAJ_P0060901 Fam198b protein_coding protein_coding MGP_CBAJ_T0060902.1 MGP_CBAJ_G0027010.1 mouse_genomes_project 3 85361545 85427229 + MGP_CBAJ_P0060902 Fam198b protein_coding protein_coding MGP_CBAJ_T0060903.1 MGP_CBAJ_G0027010.1 mouse_genomes_project 3 85361671 85365261 + Fam198b protein_coding retained_intron MGP_CBAJ_T0007448.1 MGP_CBAJ_G0006093.1 mouse_genomes_project 3 56147197 56163205 + C820005J03Rik lincRNA lincRNA MGP_CBAJ_T0007568.1 MGP_CBAJ_G0006184.1 mouse_genomes_project 3 126600622 126602928 + Gm43202 lincRNA lincRNA MGP_CBAJ_T0013921.1 MGP_CBAJ_G0012033.1 mouse_genomes_project 3 74164480 74165207 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001339.1 MGP_CBAJ_G0001265.1 mouse_genomes_project 3 166946906 166948021 + TEC TEC MGP_CBAJ_T0013887.1 MGP_CBAJ_G0011999.1 mouse_genomes_project 3 64121444 64121823 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099184.1 MGP_CBAJ_G0037439.1 mouse_genomes_project 3 92402300 92402411 + Gm23025 snRNA snRNA MGP_CBAJ_T0013873.1 MGP_CBAJ_G0011985.1 mouse_genomes_project 3 60809346 60809580 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061795.1 MGP_CBAJ_G0027223.1 mouse_genomes_project 3 100939810 100943037 + MGP_CBAJ_P0061795 Tchhl1 protein_coding protein_coding MGP_CBAJ_T0101863.1 MGP_CBAJ_G0039894.1 mouse_genomes_project 3 100443669 100443894 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013971.1 MGP_CBAJ_G0012083.1 mouse_genomes_project 3 95028510 95028944 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001276.1 MGP_CBAJ_G0001203.1 mouse_genomes_project 3 135720010 135720256 - TEC TEC MGP_CBAJ_T0062170.1 MGP_CBAJ_G0027296.1 mouse_genomes_project 3 104543788 104572998 - MGP_CBAJ_P0062170 BC107364 protein_coding protein_coding MGP_CBAJ_T0062171.1 MGP_CBAJ_G0027296.1 mouse_genomes_project 3 104543788 104572998 - MGP_CBAJ_P0062171 BC107364 protein_coding protein_coding MGP_CBAJ_T0001335.1 MGP_CBAJ_G0001261.1 mouse_genomes_project 3 162812353 162812893 + TEC TEC MGP_CBAJ_T0001296.1 MGP_CBAJ_G0001223.1 mouse_genomes_project 3 139083393 139086608 - TEC TEC MGP_CBAJ_T0063145.1 MGP_CBAJ_G0027516.1 mouse_genomes_project 3 133719324 133747180 - MGP_CBAJ_P0063145 Fnbp1l protein_coding protein_coding MGP_CBAJ_T0063146.1 MGP_CBAJ_G0027516.1 mouse_genomes_project 3 133719330 133811726 - MGP_CBAJ_P0063146 Fnbp1l protein_coding protein_coding MGP_CBAJ_T0063147.1 MGP_CBAJ_G0027516.1 mouse_genomes_project 3 133722710 133811564 - MGP_CBAJ_P0063147 Fnbp1l protein_coding protein_coding MGP_CBAJ_T0063148.1 MGP_CBAJ_G0027516.1 mouse_genomes_project 3 133728674 133735717 - Fnbp1l protein_coding retained_intron MGP_CBAJ_T0063149.1 MGP_CBAJ_G0027516.1 mouse_genomes_project 3 133741215 133742551 - Fnbp1l protein_coding retained_intron MGP_CBAJ_T0100456.1 MGP_CBAJ_G0038711.1 mouse_genomes_project 3 80664340 80664475 + Gm25846 snoRNA snoRNA MGP_CBAJ_T0013818.1 MGP_CBAJ_G0011930.1 mouse_genomes_project 3 39877593 39877878 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011411.1 MGP_CBAJ_G0009549.1 mouse_genomes_project 3 61984097 61984173 + Gm27793 misc_RNA misc_RNA MGP_CBAJ_T0061436.1 MGP_CBAJ_G0027113.1 mouse_genomes_project 3 95995515 95999813 + MGP_CBAJ_P0061436 Muc1 protein_coding protein_coding MGP_CBAJ_T0061437.1 MGP_CBAJ_G0027113.1 mouse_genomes_project 3 95997688 95998532 + Muc1 protein_coding processed_transcript MGP_CBAJ_T0061438.1 MGP_CBAJ_G0027113.1 mouse_genomes_project 3 95997920 95999629 + Muc1 protein_coding processed_transcript MGP_CBAJ_T0001212.1 MGP_CBAJ_G0001139.1 mouse_genomes_project 3 83744365 83749970 - TEC TEC MGP_CBAJ_T0061702.1 MGP_CBAJ_G0027161.1 mouse_genomes_project 3 97481143 97487036 + MGP_CBAJ_P0061702 S100a16 protein_coding protein_coding MGP_CBAJ_T0061703.1 MGP_CBAJ_G0027161.1 mouse_genomes_project 3 97481204 97486902 + MGP_CBAJ_P0061703 S100a16 protein_coding protein_coding MGP_CBAJ_T0061704.1 MGP_CBAJ_G0027161.1 mouse_genomes_project 3 97481214 97486623 + S100a16 protein_coding processed_transcript MGP_CBAJ_T0061705.1 MGP_CBAJ_G0027161.1 mouse_genomes_project 3 97482774 97486815 + MGP_CBAJ_P0061705 S100a16 protein_coding protein_coding MGP_CBAJ_T0061706.1 MGP_CBAJ_G0027161.1 mouse_genomes_project 3 97483177 97486317 + MGP_CBAJ_P0061706 S100a16 protein_coding protein_coding MGP_CBAJ_T0061707.1 MGP_CBAJ_G0027161.1 mouse_genomes_project 3 97485035 97486636 + MGP_CBAJ_P0061707 S100a16 protein_coding protein_coding MGP_CBAJ_T0061708.1 MGP_CBAJ_G0027161.1 mouse_genomes_project 3 97485038 97486750 + MGP_CBAJ_P0061708 S100a16 protein_coding protein_coding MGP_CBAJ_T0061709.1 MGP_CBAJ_G0027161.1 mouse_genomes_project 3 97485050 97487039 + MGP_CBAJ_P0061709 S100a16 protein_coding protein_coding MGP_CBAJ_T0007462.1 MGP_CBAJ_G0006102.1 mouse_genomes_project 3 66852885 66872326 + Gm34240 lincRNA lincRNA MGP_CBAJ_T0098037.1 MGP_CBAJ_G0036310.1 mouse_genomes_project 3 104600978 104601095 + Gm28001 rRNA rRNA MGP_CBAJ_T0001226.1 MGP_CBAJ_G0001153.1 mouse_genomes_project 3 103261247 103263717 + TEC TEC MGP_CBAJ_T0059788.1 MGP_CBAJ_G0026789.1 mouse_genomes_project 3 18688929 18731609 - MGP_CBAJ_P0059788 Hps3 protein_coding protein_coding MGP_CBAJ_T0059789.1 MGP_CBAJ_G0026789.1 mouse_genomes_project 3 18688934 18731574 - Hps3 protein_coding retained_intron MGP_CBAJ_T0059790.1 MGP_CBAJ_G0026789.1 mouse_genomes_project 3 18689051 18709008 - Hps3 protein_coding processed_transcript MGP_CBAJ_T0059791.1 MGP_CBAJ_G0026789.1 mouse_genomes_project 3 18689054 18731596 - MGP_CBAJ_P0059791 Hps3 protein_coding protein_coding MGP_CBAJ_T0059792.1 MGP_CBAJ_G0026789.1 mouse_genomes_project 3 18695216 18707814 - Hps3 protein_coding processed_transcript MGP_CBAJ_T0059793.1 MGP_CBAJ_G0026789.1 mouse_genomes_project 3 18706111 18731596 - Hps3 protein_coding retained_intron MGP_CBAJ_T0059794.1 MGP_CBAJ_G0026789.1 mouse_genomes_project 3 18707406 18731588 - Hps3 protein_coding retained_intron MGP_CBAJ_T0059795.1 MGP_CBAJ_G0026789.1 mouse_genomes_project 3 18709833 18731596 - Hps3 protein_coding retained_intron MGP_CBAJ_T0059796.1 MGP_CBAJ_G0026789.1 mouse_genomes_project 3 18710098 18731590 - Hps3 protein_coding processed_transcript MGP_CBAJ_T0059797.1 MGP_CBAJ_G0026789.1 mouse_genomes_project 3 18711241 18731588 - Hps3 protein_coding retained_intron MGP_CBAJ_T0059798.1 MGP_CBAJ_G0026789.1 mouse_genomes_project 3 18731121 18731596 - Hps3 protein_coding processed_transcript MGP_CBAJ_T0099186.1 MGP_CBAJ_G0037441.1 mouse_genomes_project 3 92633946 92634053 + Gm25039 snRNA snRNA MGP_CBAJ_T0001363.1 MGP_CBAJ_G0001289.1 mouse_genomes_project 3 173728302 173732641 + TEC TEC MGP_CBAJ_T0001143.1 MGP_CBAJ_G0001072.1 mouse_genomes_project 3 52902593 52906371 - TEC TEC MGP_CBAJ_T0011410.1 MGP_CBAJ_G0009548.1 mouse_genomes_project 3 45034663 45034973 + Gm25714 misc_RNA misc_RNA MGP_CBAJ_T0060029.1 MGP_CBAJ_G0026834.1 mouse_genomes_project 3 32715784 32729883 - MGP_CBAJ_P0060029 Mrpl47 protein_coding protein_coding MGP_CBAJ_T0060030.1 MGP_CBAJ_G0026834.1 mouse_genomes_project 3 32717962 32722928 - Mrpl47 protein_coding processed_transcript MGP_CBAJ_T0060031.1 MGP_CBAJ_G0026834.1 mouse_genomes_project 3 32728836 32730339 - Mrpl47 protein_coding retained_intron MGP_CBAJ_T0060968.1 MGP_CBAJ_G0027029.1 mouse_genomes_project 3 89768281 89773777 - MGP_CBAJ_P0060968 Tlr2 protein_coding protein_coding MGP_CBAJ_T0100489.1 MGP_CBAJ_G0038744.1 mouse_genomes_project 3 135830872 135831002 + Gm22900 snoRNA snoRNA MGP_CBAJ_T0001230.1 MGP_CBAJ_G0001157.1 mouse_genomes_project 3 104322480 104324094 + TEC TEC MGP_CBAJ_T0063591.1 MGP_CBAJ_G0027598.1 mouse_genomes_project 3 150915173 150933803 - MGP_CBAJ_P0063591 Gm5105 protein_coding protein_coding MGP_CBAJ_T0100473.1 MGP_CBAJ_G0038728.1 mouse_genomes_project 3 104884095 104884231 - Gm22581 snoRNA snoRNA MGP_CBAJ_T0004291.1 MGP_CBAJ_G0003746.1 mouse_genomes_project 3 143272664 143278538 - antisense antisense MGP_CBAJ_T0061046.1 MGP_CBAJ_G0027047.1 mouse_genomes_project 3 92808049 92810536 - MGP_CBAJ_P0061046 Mab21l2 protein_coding protein_coding MGP_CBAJ_T0061047.1 MGP_CBAJ_G0027047.1 mouse_genomes_project 3 92808301 92810881 - Mab21l2 protein_coding processed_pseudogene MGP_CBAJ_T0059832.1 MGP_CBAJ_G0026797.1 mouse_genomes_project 3 24591222 25593847 - MGP_CBAJ_P0059832 Nlgn1 protein_coding protein_coding MGP_CBAJ_T0059833.1 MGP_CBAJ_G0026797.1 mouse_genomes_project 3 24596799 25375903 - MGP_CBAJ_P0059833 Nlgn1 protein_coding protein_coding MGP_CBAJ_T0059834.1 MGP_CBAJ_G0026797.1 mouse_genomes_project 3 24596799 25375903 - MGP_CBAJ_P0059834 Nlgn1 protein_coding protein_coding MGP_CBAJ_T0059835.1 MGP_CBAJ_G0026797.1 mouse_genomes_project 3 24598419 25395293 - MGP_CBAJ_P0059835 Nlgn1 protein_coding protein_coding MGP_CBAJ_T0059836.1 MGP_CBAJ_G0026797.1 mouse_genomes_project 3 25373838 25593257 - Nlgn1 protein_coding retained_intron MGP_CBAJ_T0014039.1 MGP_CBAJ_G0012151.1 mouse_genomes_project 3 113084646 113085484 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004193.1 MGP_CBAJ_G0003684.1 mouse_genomes_project 3 95263819 95268436 - Gm20652 antisense antisense MGP_CBAJ_T0004169.1 MGP_CBAJ_G0003666.1 mouse_genomes_project 3 62361731 62368732 + Gm38186 antisense antisense MGP_CBAJ_T0001225.1 MGP_CBAJ_G0001152.1 mouse_genomes_project 3 100853844 100855043 + TEC TEC MGP_CBAJ_T0061774.1 MGP_CBAJ_G0027209.1 mouse_genomes_project 3 100181868 100183206 - MGP_CBAJ_P0061774 Lce1l protein_coding protein_coding MGP_CBAJ_T0061759.1 MGP_CBAJ_G0027195.1 mouse_genomes_project 3 99966478 99968220 - MGP_CBAJ_P0061759 Lce1a1 protein_coding protein_coding MGP_CBAJ_T0060336.1 MGP_CBAJ_G0026884.1 mouse_genomes_project 3 51868589 52491670 - MGP_CBAJ_P0060336 Slc7a11 protein_coding protein_coding MGP_CBAJ_T0060337.1 MGP_CBAJ_G0026884.1 mouse_genomes_project 3 52411849 52491667 - MGP_CBAJ_P0060337 Slc7a11 protein_coding protein_coding MGP_CBAJ_T0060338.1 MGP_CBAJ_G0026884.1 mouse_genomes_project 3 52416760 52417711 - Slc7a11 protein_coding processed_transcript MGP_CBAJ_T0060339.1 MGP_CBAJ_G0026884.1 mouse_genomes_project 3 52463978 52491670 - Slc7a11 protein_coding retained_intron MGP_CBAJ_T0060340.1 MGP_CBAJ_G0026884.1 mouse_genomes_project 3 52488976 52491661 - Slc7a11 protein_coding retained_intron MGP_CBAJ_T0062308.1 MGP_CBAJ_G0027332.1 mouse_genomes_project 3 106936028 106943756 - MGP_CBAJ_P0062308 protein_coding protein_coding MGP_CBAJ_T0099214.1 MGP_CBAJ_G0037469.1 mouse_genomes_project 3 131236198 131236304 - Gm23733 snRNA snRNA MGP_CBAJ_T0010432.1 MGP_CBAJ_G0008570.1 mouse_genomes_project 3 147689302 147689408 + Gm24048 miRNA miRNA MGP_CBAJ_T0001070.1 MGP_CBAJ_G0001000.1 mouse_genomes_project 3 2173173 2175558 + TEC TEC MGP_CBAJ_T0001071.1 MGP_CBAJ_G0001000.1 mouse_genomes_project 3 2175104 2175437 + TEC TEC MGP_CBAJ_T0060527.1 MGP_CBAJ_G0026920.1 mouse_genomes_project 3 60219745 60234713 + MGP_CBAJ_P0060527 Tm4sf4 protein_coding protein_coding MGP_CBAJ_T0098204.1 MGP_CBAJ_G0036477.1 mouse_genomes_project 3 118113722 118114136 - Scarna2 scaRNA scaRNA MGP_CBAJ_T0004194.1 MGP_CBAJ_G0003685.1 mouse_genomes_project 3 95336583 95337951 - Gm43714 antisense antisense MGP_CBAJ_T0062688.1 MGP_CBAJ_G0027419.1 mouse_genomes_project 3 116580066 116590509 - MGP_CBAJ_P0062688 Cym protein_coding protein_coding MGP_CBAJ_T0101851.1 MGP_CBAJ_G0039882.1 mouse_genomes_project 3 74749586 74750621 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0059744.1 MGP_CBAJ_G0026781.1 mouse_genomes_project 3 17748789 17783320 - MGP_CBAJ_P0059744 Armc1 protein_coding protein_coding MGP_CBAJ_T0060918.1 MGP_CBAJ_G0027013.1 mouse_genomes_project 3 86673055 86868155 + MGP_CBAJ_P0060918 Pdgfc protein_coding protein_coding MGP_CBAJ_T0060919.1 MGP_CBAJ_G0027013.1 mouse_genomes_project 3 86673811 86868149 + MGP_CBAJ_P0060919 Pdgfc protein_coding nonsense_mediated_decay MGP_CBAJ_T0060920.1 MGP_CBAJ_G0027013.1 mouse_genomes_project 3 86674063 86864885 + MGP_CBAJ_P0060920 Pdgfc protein_coding nonsense_mediated_decay MGP_CBAJ_T0007531.1 MGP_CBAJ_G0006153.1 mouse_genomes_project 3 104505625 104506194 + Gm26654 lincRNA lincRNA MGP_CBAJ_T0007638.1 MGP_CBAJ_G0006241.1 mouse_genomes_project 3 156977056 156979146 + 1700001N15Rik lincRNA lincRNA MGP_CBAJ_T0059809.1 MGP_CBAJ_G0026792.1 mouse_genomes_project 3 18948159 18982559 - MGP_CBAJ_P0059809 Cpa3 protein_coding protein_coding MGP_CBAJ_T0059810.1 MGP_CBAJ_G0026792.1 mouse_genomes_project 3 18961315 18981125 - Cpa3 protein_coding processed_transcript MGP_CBAJ_T0061747.1 MGP_CBAJ_G0027185.1 mouse_genomes_project 3 99713519 99714863 + MGP_CBAJ_P0061747 Sprr2k protein_coding protein_coding MGP_CBAJ_T0064092.1 MGP_CBAJ_G0027689.1 mouse_genomes_project 3 173359378 173426548 + MGP_CBAJ_P0064092 Ankrd13c protein_coding nonsense_mediated_decay MGP_CBAJ_T0064093.1 MGP_CBAJ_G0027689.1 mouse_genomes_project 3 173359553 173423010 + MGP_CBAJ_P0064093 Ankrd13c protein_coding protein_coding MGP_CBAJ_T0064094.1 MGP_CBAJ_G0027689.1 mouse_genomes_project 3 173359553 173427155 + MGP_CBAJ_P0064094 Ankrd13c protein_coding protein_coding MGP_CBAJ_T0064095.1 MGP_CBAJ_G0027689.1 mouse_genomes_project 3 173359605 173424636 + Ankrd13c protein_coding retained_intron MGP_CBAJ_T0064096.1 MGP_CBAJ_G0027689.1 mouse_genomes_project 3 173405607 173411840 + Ankrd13c protein_coding retained_intron MGP_CBAJ_T0064097.1 MGP_CBAJ_G0027689.1 mouse_genomes_project 3 173408797 173421099 + Ankrd13c protein_coding retained_intron MGP_CBAJ_T0064098.1 MGP_CBAJ_G0027689.1 mouse_genomes_project 3 173410730 173418220 + Ankrd13c protein_coding processed_transcript MGP_CBAJ_T0064099.1 MGP_CBAJ_G0027689.1 mouse_genomes_project 3 173411308 173418190 + Ankrd13c protein_coding retained_intron MGP_CBAJ_T0064100.1 MGP_CBAJ_G0027689.1 mouse_genomes_project 3 173415620 173420197 + Ankrd13c protein_coding retained_intron MGP_CBAJ_T0064101.1 MGP_CBAJ_G0027689.1 mouse_genomes_project 3 173416498 173418236 + Ankrd13c protein_coding retained_intron MGP_CBAJ_T0013956.1 MGP_CBAJ_G0012068.1 mouse_genomes_project 3 88490167 88490747 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061151.1 MGP_CBAJ_G0027069.1 mouse_genomes_project 3 94458328 94476071 - MGP_CBAJ_P0061151 Bcan protein_coding protein_coding MGP_CBAJ_T0061152.1 MGP_CBAJ_G0027069.1 mouse_genomes_project 3 94463307 94466788 - Bcan protein_coding retained_intron MGP_CBAJ_T0061153.1 MGP_CBAJ_G0027069.1 mouse_genomes_project 3 94463307 94470174 - Bcan protein_coding retained_intron MGP_CBAJ_T0061154.1 MGP_CBAJ_G0027069.1 mouse_genomes_project 3 94464387 94468684 - Bcan protein_coding retained_intron MGP_CBAJ_T0061155.1 MGP_CBAJ_G0027069.1 mouse_genomes_project 3 94468763 94469584 - Bcan protein_coding retained_intron MGP_CBAJ_T0061156.1 MGP_CBAJ_G0027069.1 mouse_genomes_project 3 94469451 94475475 - MGP_CBAJ_P0061156 Bcan protein_coding protein_coding MGP_CBAJ_T0099162.1 MGP_CBAJ_G0037417.1 mouse_genomes_project 3 51625924 51626031 + Gm23096 snRNA snRNA MGP_CBAJ_T0017723.1 MGP_CBAJ_G0015259.1 mouse_genomes_project 3 115101001 115128658 + Gm42890 processed_transcript retained_intron MGP_CBAJ_T0017724.1 MGP_CBAJ_G0015259.1 mouse_genomes_project 3 115107614 115117906 + Gm42890 processed_transcript retained_intron MGP_CBAJ_T0063130.1 MGP_CBAJ_G0027514.1 mouse_genomes_project 3 133425785 133436669 + MGP_CBAJ_P0063130 Dnttip2 protein_coding protein_coding MGP_CBAJ_T0063131.1 MGP_CBAJ_G0027514.1 mouse_genomes_project 3 133425815 133427608 + Dnttip2 protein_coding processed_transcript MGP_CBAJ_T0063132.1 MGP_CBAJ_G0027514.1 mouse_genomes_project 3 133427414 133436647 + Dnttip2 protein_coding processed_transcript MGP_CBAJ_T0063133.1 MGP_CBAJ_G0027514.1 mouse_genomes_project 3 133428170 133431011 + Dnttip2 protein_coding retained_intron MGP_CBAJ_T0063134.1 MGP_CBAJ_G0027514.1 mouse_genomes_project 3 133431974 133436496 + Dnttip2 protein_coding retained_intron MGP_CBAJ_T0062219.1 MGP_CBAJ_G0027310.1 mouse_genomes_project 3 104871588 104887501 - MGP_CBAJ_P0062219 Polr3c protein_coding protein_coding MGP_CBAJ_T0062220.1 MGP_CBAJ_G0027310.1 mouse_genomes_project 3 104871621 104887314 - MGP_CBAJ_P0062220 Polr3c protein_coding protein_coding MGP_CBAJ_T0062221.1 MGP_CBAJ_G0027310.1 mouse_genomes_project 3 104876552 104883650 - MGP_CBAJ_P0062221 Polr3c protein_coding nonsense_mediated_decay MGP_CBAJ_T0062222.1 MGP_CBAJ_G0027310.1 mouse_genomes_project 3 104878552 104887349 - Polr3c protein_coding retained_intron MGP_CBAJ_T0062223.1 MGP_CBAJ_G0027310.1 mouse_genomes_project 3 104883250 104887327 - MGP_CBAJ_P0062223 Polr3c protein_coding protein_coding MGP_CBAJ_T0062224.1 MGP_CBAJ_G0027310.1 mouse_genomes_project 3 104883253 104887348 - MGP_CBAJ_P0062224 Polr3c protein_coding protein_coding MGP_CBAJ_T0100490.1 MGP_CBAJ_G0038745.1 mouse_genomes_project 3 138620662 138620794 + Gm25501 snoRNA snoRNA MGP_CBAJ_T0061121.1 MGP_CBAJ_G0027062.1 mouse_genomes_project 3 94300337 94335036 - MGP_CBAJ_P0061121 Prcc protein_coding protein_coding MGP_CBAJ_T0061904.1 MGP_CBAJ_G0027245.1 mouse_genomes_project 3 102833274 102838492 - protein_coding retained_intron MGP_CBAJ_T0061905.1 MGP_CBAJ_G0027245.1 mouse_genomes_project 3 102833515 102842034 - MGP_CBAJ_P0061905 protein_coding unknown_likely_coding MGP_CBAJ_T0061906.1 MGP_CBAJ_G0027245.1 mouse_genomes_project 3 102833516 102841909 - protein_coding retained_intron MGP_CBAJ_T0061907.1 MGP_CBAJ_G0027245.1 mouse_genomes_project 3 102833516 102842090 - protein_coding retained_intron MGP_CBAJ_T0061908.1 MGP_CBAJ_G0027245.1 mouse_genomes_project 3 102833521 102842123 - MGP_CBAJ_P0061908 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061909.1 MGP_CBAJ_G0027245.1 mouse_genomes_project 3 102838524 102842134 - MGP_CBAJ_P0061909 protein_coding protein_coding MGP_CBAJ_T0061910.1 MGP_CBAJ_G0027245.1 mouse_genomes_project 3 102838653 102841910 - MGP_CBAJ_P0061910 protein_coding protein_coding MGP_CBAJ_T0061911.1 MGP_CBAJ_G0027245.1 mouse_genomes_project 3 102838858 102841904 - MGP_CBAJ_P0061911 protein_coding protein_coding MGP_CBAJ_T0060600.1 MGP_CBAJ_G0026939.1 mouse_genomes_project 3 62331855 62361717 - MGP_CBAJ_P0060600 Igsf10 protein_coding protein_coding MGP_CBAJ_T0060601.1 MGP_CBAJ_G0026939.1 mouse_genomes_project 3 62333046 62361620 - MGP_CBAJ_P0060601 Igsf10 protein_coding protein_coding MGP_CBAJ_T0060602.1 MGP_CBAJ_G0026939.1 mouse_genomes_project 3 62333046 62361855 - MGP_CBAJ_P0060602 Igsf10 protein_coding protein_coding MGP_CBAJ_T0060603.1 MGP_CBAJ_G0026939.1 mouse_genomes_project 3 62357231 62361717 - MGP_CBAJ_P0060603 Igsf10 protein_coding protein_coding MGP_CBAJ_T0061688.1 MGP_CBAJ_G0027157.1 mouse_genomes_project 3 97441967 97453546 - MGP_CBAJ_P0061688 Chtop protein_coding protein_coding MGP_CBAJ_T0061689.1 MGP_CBAJ_G0027157.1 mouse_genomes_project 3 97441967 97453548 - MGP_CBAJ_P0061689 Chtop protein_coding protein_coding MGP_CBAJ_T0061690.1 MGP_CBAJ_G0027157.1 mouse_genomes_project 3 97441967 97453547 - MGP_CBAJ_P0061690 Chtop protein_coding protein_coding MGP_CBAJ_T0061691.1 MGP_CBAJ_G0027157.1 mouse_genomes_project 3 97442505 97453570 - MGP_CBAJ_P0061691 Chtop protein_coding protein_coding MGP_CBAJ_T0061692.1 MGP_CBAJ_G0027157.1 mouse_genomes_project 3 97442706 97453581 - MGP_CBAJ_P0061692 Chtop protein_coding protein_coding MGP_CBAJ_T0061693.1 MGP_CBAJ_G0027157.1 mouse_genomes_project 3 97445400 97453572 - MGP_CBAJ_P0061693 Chtop protein_coding protein_coding MGP_CBAJ_T0061694.1 MGP_CBAJ_G0027157.1 mouse_genomes_project 3 97446373 97453118 - MGP_CBAJ_P0061694 Chtop protein_coding protein_coding MGP_CBAJ_T0014142.1 MGP_CBAJ_G0012254.1 mouse_genomes_project 3 149006717 149008222 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061114.1 MGP_CBAJ_G0027060.1 mouse_genomes_project 3 94232290 94253762 + MGP_CBAJ_P0061114 Insrr protein_coding protein_coding MGP_CBAJ_T0061115.1 MGP_CBAJ_G0027060.1 mouse_genomes_project 3 94232304 94242800 + Insrr protein_coding retained_intron MGP_CBAJ_T0061116.1 MGP_CBAJ_G0027060.1 mouse_genomes_project 3 94232433 94253713 + MGP_CBAJ_P0061116 Insrr protein_coding protein_coding MGP_CBAJ_T0061117.1 MGP_CBAJ_G0027060.1 mouse_genomes_project 3 94239657 94240523 + Insrr protein_coding processed_transcript MGP_CBAJ_T0063811.1 MGP_CBAJ_G0027646.1 mouse_genomes_project 3 160442498 160486254 + MGP_CBAJ_P0063811 Ssx2ip protein_coding protein_coding MGP_CBAJ_T0063812.1 MGP_CBAJ_G0027646.1 mouse_genomes_project 3 160442498 160485892 + MGP_CBAJ_P0063812 Ssx2ip protein_coding protein_coding MGP_CBAJ_T0063813.1 MGP_CBAJ_G0027646.1 mouse_genomes_project 3 160442520 160486243 + MGP_CBAJ_P0063813 Ssx2ip protein_coding protein_coding MGP_CBAJ_T0063814.1 MGP_CBAJ_G0027646.1 mouse_genomes_project 3 160442542 160485016 + MGP_CBAJ_P0063814 Ssx2ip protein_coding protein_coding MGP_CBAJ_T0063815.1 MGP_CBAJ_G0027646.1 mouse_genomes_project 3 160442547 160458900 + MGP_CBAJ_P0063815 Ssx2ip protein_coding protein_coding MGP_CBAJ_T0063816.1 MGP_CBAJ_G0027646.1 mouse_genomes_project 3 160442834 160459860 + MGP_CBAJ_P0063816 Ssx2ip protein_coding protein_coding MGP_CBAJ_T0063817.1 MGP_CBAJ_G0027646.1 mouse_genomes_project 3 160476610 160478686 + Ssx2ip protein_coding retained_intron MGP_CBAJ_T0101845.1 MGP_CBAJ_G0039876.1 mouse_genomes_project 3 62640614 62660493 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0063898.1 MGP_CBAJ_G0027660.1 mouse_genomes_project 3 166455480 166459620 - MGP_CBAJ_P0063898 Ifi44l protein_coding protein_coding MGP_CBAJ_T0062826.1 MGP_CBAJ_G0027455.1 mouse_genomes_project 3 118000207 118095321 - MGP_CBAJ_P0062826 5330417C22Rik protein_coding protein_coding MGP_CBAJ_T0062827.1 MGP_CBAJ_G0027455.1 mouse_genomes_project 3 118002590 118095397 - MGP_CBAJ_P0062827 5330417C22Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0062828.1 MGP_CBAJ_G0027455.1 mouse_genomes_project 3 118002696 118095401 - MGP_CBAJ_P0062828 5330417C22Rik protein_coding protein_coding MGP_CBAJ_T0062829.1 MGP_CBAJ_G0027455.1 mouse_genomes_project 3 118009990 118011419 - 5330417C22Rik protein_coding retained_intron MGP_CBAJ_T0062830.1 MGP_CBAJ_G0027455.1 mouse_genomes_project 3 118014215 118016497 - 5330417C22Rik protein_coding retained_intron MGP_CBAJ_T0062831.1 MGP_CBAJ_G0027455.1 mouse_genomes_project 3 118038325 118095332 - 5330417C22Rik protein_coding retained_intron MGP_CBAJ_T0060003.1 MGP_CBAJ_G0026831.1 mouse_genomes_project 3 32488539 32542232 + MGP_CBAJ_P0060003 Mfn1 protein_coding protein_coding MGP_CBAJ_T0060004.1 MGP_CBAJ_G0026831.1 mouse_genomes_project 3 32488605 32508760 + Mfn1 protein_coding retained_intron MGP_CBAJ_T0060005.1 MGP_CBAJ_G0026831.1 mouse_genomes_project 3 32488613 32508473 + MGP_CBAJ_P0060005 Mfn1 protein_coding protein_coding MGP_CBAJ_T0060006.1 MGP_CBAJ_G0026831.1 mouse_genomes_project 3 32490609 32505911 + MGP_CBAJ_P0060006 Mfn1 protein_coding protein_coding MGP_CBAJ_T0060007.1 MGP_CBAJ_G0026831.1 mouse_genomes_project 3 32490618 32540350 + MGP_CBAJ_P0060007 Mfn1 protein_coding protein_coding MGP_CBAJ_T0060008.1 MGP_CBAJ_G0026831.1 mouse_genomes_project 3 32508308 32523893 + Mfn1 protein_coding retained_intron MGP_CBAJ_T0060009.1 MGP_CBAJ_G0026831.1 mouse_genomes_project 3 32514869 32524162 + Mfn1 protein_coding retained_intron MGP_CBAJ_T0060010.1 MGP_CBAJ_G0026831.1 mouse_genomes_project 3 32522305 32531127 + MGP_CBAJ_P0060010 Mfn1 protein_coding protein_coding MGP_CBAJ_T0060011.1 MGP_CBAJ_G0026831.1 mouse_genomes_project 3 32523666 32524560 + Mfn1 protein_coding retained_intron MGP_CBAJ_T0060012.1 MGP_CBAJ_G0026831.1 mouse_genomes_project 3 32537291 32540154 + Mfn1 protein_coding retained_intron MGP_CBAJ_T0007608.1 MGP_CBAJ_G0006215.1 mouse_genomes_project 3 145632875 145635366 - Gm43254 lincRNA lincRNA MGP_CBAJ_T0064121.1 MGP_CBAJ_G0027691.1 mouse_genomes_project 3 173458107 173491588 + MGP_CBAJ_P0064121 Lrrc40 protein_coding protein_coding MGP_CBAJ_T0064122.1 MGP_CBAJ_G0027691.1 mouse_genomes_project 3 173458145 173490190 + MGP_CBAJ_P0064122 Lrrc40 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064123.1 MGP_CBAJ_G0027691.1 mouse_genomes_project 3 173458147 173490190 + MGP_CBAJ_P0064123 Lrrc40 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064124.1 MGP_CBAJ_G0027691.1 mouse_genomes_project 3 173458167 173474944 + MGP_CBAJ_P0064124 Lrrc40 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064125.1 MGP_CBAJ_G0027691.1 mouse_genomes_project 3 173458195 173474933 + MGP_CBAJ_P0064125 Lrrc40 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064126.1 MGP_CBAJ_G0027691.1 mouse_genomes_project 3 173458305 173474879 + MGP_CBAJ_P0064126 Lrrc40 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064127.1 MGP_CBAJ_G0027691.1 mouse_genomes_project 3 173485384 173489647 + Lrrc40 protein_coding retained_intron MGP_CBAJ_T0064128.1 MGP_CBAJ_G0027691.1 mouse_genomes_project 3 173485785 173487163 + Lrrc40 protein_coding retained_intron MGP_CBAJ_T0064032.1 MGP_CBAJ_G0027677.1 mouse_genomes_project 3 168973090 169331225 + MGP_CBAJ_P0064032 Slc44a5 protein_coding protein_coding MGP_CBAJ_T0064033.1 MGP_CBAJ_G0027677.1 mouse_genomes_project 3 168973419 169327283 + MGP_CBAJ_P0064033 Slc44a5 protein_coding unknown_likely_coding MGP_CBAJ_T0064034.1 MGP_CBAJ_G0027677.1 mouse_genomes_project 3 169274746 169277790 + Slc44a5 protein_coding processed_transcript MGP_CBAJ_T0064035.1 MGP_CBAJ_G0027677.1 mouse_genomes_project 3 169312167 169331225 + Slc44a5 protein_coding retained_intron MGP_CBAJ_T0062635.1 MGP_CBAJ_G0027405.1 mouse_genomes_project 3 115171246 115179238 - MGP_CBAJ_P0062635 Chil5 protein_coding protein_coding MGP_CBAJ_T0062636.1 MGP_CBAJ_G0027405.1 mouse_genomes_project 3 115171292 115179243 - MGP_CBAJ_P0062636 Chil5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062637.1 MGP_CBAJ_G0027405.1 mouse_genomes_project 3 115171459 115185803 - MGP_CBAJ_P0062637 Chil5 protein_coding protein_coding MGP_CBAJ_T0013893.1 MGP_CBAJ_G0012005.1 mouse_genomes_project 3 67285594 67286548 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0062737.1 MGP_CBAJ_G0027434.1 mouse_genomes_project 3 117351520 117354386 + MGP_CBAJ_P0062737 Gstm5 protein_coding protein_coding MGP_CBAJ_T0062738.1 MGP_CBAJ_G0027434.1 mouse_genomes_project 3 117351535 117354275 + MGP_CBAJ_P0062738 Gstm5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062739.1 MGP_CBAJ_G0027434.1 mouse_genomes_project 3 117351545 117354386 + MGP_CBAJ_P0062739 Gstm5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062740.1 MGP_CBAJ_G0027434.1 mouse_genomes_project 3 117351640 117354045 + MGP_CBAJ_P0062740 Gstm5 protein_coding protein_coding MGP_CBAJ_T0062741.1 MGP_CBAJ_G0027434.1 mouse_genomes_project 3 117351653 117354249 + MGP_CBAJ_P0062741 Gstm5 protein_coding protein_coding MGP_CBAJ_T0062742.1 MGP_CBAJ_G0027434.1 mouse_genomes_project 3 117351946 117354378 + MGP_CBAJ_P0062742 Gstm5 protein_coding protein_coding MGP_CBAJ_T0062616.1 MGP_CBAJ_G0027400.1 mouse_genomes_project 3 115060194 115073523 - MGP_CBAJ_P0062616 I830077J02Rik protein_coding protein_coding MGP_CBAJ_T0062617.1 MGP_CBAJ_G0027400.1 mouse_genomes_project 3 115062245 115063834 - MGP_CBAJ_P0062617 I830077J02Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0062618.1 MGP_CBAJ_G0027400.1 mouse_genomes_project 3 115063520 115073475 - I830077J02Rik protein_coding retained_intron MGP_CBAJ_T0013998.1 MGP_CBAJ_G0012110.1 mouse_genomes_project 3 103257815 103258009 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061803.1 MGP_CBAJ_G0027227.1 mouse_genomes_project 3 101997322 102002572 + MGP_CBAJ_P0061803 Them5 protein_coding protein_coding MGP_CBAJ_T0061804.1 MGP_CBAJ_G0027227.1 mouse_genomes_project 3 101997482 102002570 + MGP_CBAJ_P0061804 Them5 protein_coding protein_coding MGP_CBAJ_T0013742.1 MGP_CBAJ_G0011854.1 mouse_genomes_project 3 11882148 11883505 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013937.1 MGP_CBAJ_G0012049.1 mouse_genomes_project 3 81022722 81023513 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101852.1 MGP_CBAJ_G0039883.1 mouse_genomes_project 3 85703087 85703238 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0060393.1 MGP_CBAJ_G0026895.1 mouse_genomes_project 3 55263850 55301306 - MGP_CBAJ_P0060393 Cog6 protein_coding protein_coding MGP_CBAJ_T0060394.1 MGP_CBAJ_G0026895.1 mouse_genomes_project 3 55264097 55278786 - Cog6 protein_coding retained_intron MGP_CBAJ_T0060395.1 MGP_CBAJ_G0026895.1 mouse_genomes_project 3 55266691 55301285 - MGP_CBAJ_P0060395 Cog6 protein_coding protein_coding MGP_CBAJ_T0060396.1 MGP_CBAJ_G0026895.1 mouse_genomes_project 3 55275412 55301287 - MGP_CBAJ_P0060396 Cog6 protein_coding protein_coding MGP_CBAJ_T0060397.1 MGP_CBAJ_G0026895.1 mouse_genomes_project 3 55279883 55301279 - Cog6 protein_coding retained_intron MGP_CBAJ_T0060398.1 MGP_CBAJ_G0026895.1 mouse_genomes_project 3 55294426 55301281 - Cog6 protein_coding retained_intron MGP_CBAJ_T0014005.1 MGP_CBAJ_G0012117.1 mouse_genomes_project 3 103990949 103991309 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0063297.1 MGP_CBAJ_G0027542.1 mouse_genomes_project 3 139582698 139618153 - MGP_CBAJ_P0063297 Ap1ar protein_coding protein_coding MGP_CBAJ_T0063298.1 MGP_CBAJ_G0027542.1 mouse_genomes_project 3 139582703 139618141 - MGP_CBAJ_P0063298 Ap1ar protein_coding protein_coding MGP_CBAJ_T0063299.1 MGP_CBAJ_G0027542.1 mouse_genomes_project 3 139582957 139584606 - Ap1ar protein_coding retained_intron MGP_CBAJ_T0063300.1 MGP_CBAJ_G0027542.1 mouse_genomes_project 3 139587915 139588550 - Ap1ar protein_coding retained_intron MGP_CBAJ_T0063301.1 MGP_CBAJ_G0027542.1 mouse_genomes_project 3 139589110 139595990 - Ap1ar protein_coding retained_intron MGP_CBAJ_T0063302.1 MGP_CBAJ_G0027542.1 mouse_genomes_project 3 139594016 139595679 - Ap1ar protein_coding retained_intron MGP_CBAJ_T0063303.1 MGP_CBAJ_G0027542.1 mouse_genomes_project 3 139598043 139606645 - Ap1ar protein_coding retained_intron MGP_CBAJ_T0063304.1 MGP_CBAJ_G0027542.1 mouse_genomes_project 3 139599098 139617861 - Ap1ar protein_coding retained_intron MGP_CBAJ_T0063305.1 MGP_CBAJ_G0027542.1 mouse_genomes_project 3 139599099 139603801 - Ap1ar protein_coding retained_intron MGP_CBAJ_T0063306.1 MGP_CBAJ_G0027542.1 mouse_genomes_project 3 139599134 139617886 - MGP_CBAJ_P0063306 Ap1ar protein_coding nonsense_mediated_decay MGP_CBAJ_T0013839.1 MGP_CBAJ_G0011951.1 mouse_genomes_project 3 48798374 48798840 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098351.1 MGP_CBAJ_G0036617.1 mouse_genomes_project 3 113001509 113002663 - Gm42696 sense_intronic sense_intronic MGP_CBAJ_T0014126.1 MGP_CBAJ_G0012238.1 mouse_genomes_project 3 145962486 145962761 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060912.1 MGP_CBAJ_G0027012.1 mouse_genomes_project 3 86441486 86521295 - MGP_CBAJ_P0060912 Glrb protein_coding protein_coding MGP_CBAJ_T0060913.1 MGP_CBAJ_G0027012.1 mouse_genomes_project 3 86441486 86521249 - MGP_CBAJ_P0060913 Glrb protein_coding nonsense_mediated_decay MGP_CBAJ_T0060914.1 MGP_CBAJ_G0027012.1 mouse_genomes_project 3 86442847 86519726 - MGP_CBAJ_P0060914 Glrb protein_coding protein_coding MGP_CBAJ_T0060915.1 MGP_CBAJ_G0027012.1 mouse_genomes_project 3 86455480 86521163 - MGP_CBAJ_P0060915 Glrb protein_coding protein_coding MGP_CBAJ_T0060916.1 MGP_CBAJ_G0027012.1 mouse_genomes_project 3 86455487 86457108 - Glrb protein_coding retained_intron MGP_CBAJ_T0060917.1 MGP_CBAJ_G0027012.1 mouse_genomes_project 3 86464381 86521224 - MGP_CBAJ_P0060917 Glrb protein_coding nonsense_mediated_decay MGP_CBAJ_T0059709.1 MGP_CBAJ_G0026765.1 mouse_genomes_project 3 12705162 12732578 + MGP_CBAJ_P0059709 E2f5 protein_coding protein_coding MGP_CBAJ_T0059710.1 MGP_CBAJ_G0026765.1 mouse_genomes_project 3 12705192 12732577 + MGP_CBAJ_P0059710 E2f5 protein_coding protein_coding MGP_CBAJ_T0001264.1 MGP_CBAJ_G0001191.1 mouse_genomes_project 3 132430525 132431813 + TEC TEC MGP_CBAJ_T0007441.1 MGP_CBAJ_G0006087.1 mouse_genomes_project 3 54379852 54382094 + Gm37170 lincRNA lincRNA MGP_CBAJ_T0001129.1 MGP_CBAJ_G0001058.1 mouse_genomes_project 3 43007534 43011309 + TEC TEC MGP_CBAJ_T0059723.1 MGP_CBAJ_G0026770.1 mouse_genomes_project 3 13060933 13069334 + MGP_CBAJ_P0059723 Car2 protein_coding protein_coding MGP_CBAJ_T0059724.1 MGP_CBAJ_G0026770.1 mouse_genomes_project 3 13061088 13074964 + MGP_CBAJ_P0059724 Car2 protein_coding protein_coding MGP_CBAJ_T0059725.1 MGP_CBAJ_G0026770.1 mouse_genomes_project 3 13061299 13063227 + Car2 protein_coding retained_intron MGP_CBAJ_T0001176.1 MGP_CBAJ_G0001103.1 mouse_genomes_project 3 56127156 56128758 + TEC TEC MGP_CBAJ_T0013957.1 MGP_CBAJ_G0012069.1 mouse_genomes_project 3 89592211 89592770 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007648.1 MGP_CBAJ_G0006250.1 mouse_genomes_project 3 157472927 157473832 + Gm42708 lincRNA lincRNA MGP_CBAJ_T0013791.1 MGP_CBAJ_G0011903.1 mouse_genomes_project 3 33744365 33744723 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004280.1 MGP_CBAJ_G0003737.1 mouse_genomes_project 3 134708635 134711755 - Gm43591 antisense antisense MGP_CBAJ_T0013738.1 MGP_CBAJ_G0011850.1 mouse_genomes_project 3 10918016 10918359 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100475.1 MGP_CBAJ_G0038730.1 mouse_genomes_project 3 107571739 107571856 - Gm24216 snoRNA snoRNA MGP_CBAJ_T0061065.1 MGP_CBAJ_G0027052.1 mouse_genomes_project 3 93745249 93761135 + MGP_CBAJ_P0061065 Cd5l protein_coding protein_coding MGP_CBAJ_T0017704.1 MGP_CBAJ_G0015249.1 mouse_genomes_project 3 87653217 87659472 - Gm9989 processed_transcript lincRNA MGP_CBAJ_T0017705.1 MGP_CBAJ_G0015249.1 mouse_genomes_project 3 87656341 87659537 - Gm9989 processed_transcript retained_intron MGP_CBAJ_T0007495.1 MGP_CBAJ_G0006130.1 mouse_genomes_project 3 90334341 90363287 - 4930565D16Rik lincRNA lincRNA MGP_CBAJ_T0001293.1 MGP_CBAJ_G0001220.1 mouse_genomes_project 3 138833783 138837486 - TEC TEC MGP_CBAJ_T0007564.1 MGP_CBAJ_G0006181.1 mouse_genomes_project 3 121789629 122010211 + lincRNA lincRNA MGP_CBAJ_T0007362.1 MGP_CBAJ_G0006028.1 mouse_genomes_project 3 13150523 13176168 + A930001A20Rik lincRNA lincRNA MGP_CBAJ_T0062646.1 MGP_CBAJ_G0027410.1 mouse_genomes_project 3 115760624 115766804 + Dennd2d protein_coding processed_transcript MGP_CBAJ_T0062647.1 MGP_CBAJ_G0027410.1 mouse_genomes_project 3 115760650 115782998 + MGP_CBAJ_P0062647 Dennd2d protein_coding protein_coding MGP_CBAJ_T0062648.1 MGP_CBAJ_G0027410.1 mouse_genomes_project 3 115760669 115766822 + MGP_CBAJ_P0062648 Dennd2d protein_coding nonsense_mediated_decay MGP_CBAJ_T0062649.1 MGP_CBAJ_G0027410.1 mouse_genomes_project 3 115764266 115780963 + MGP_CBAJ_P0062649 Dennd2d protein_coding protein_coding MGP_CBAJ_T0062650.1 MGP_CBAJ_G0027410.1 mouse_genomes_project 3 115765634 115766858 + Dennd2d protein_coding retained_intron MGP_CBAJ_T0062651.1 MGP_CBAJ_G0027410.1 mouse_genomes_project 3 115771389 115773510 + Dennd2d protein_coding retained_intron MGP_CBAJ_T0007433.1 MGP_CBAJ_G0006080.1 mouse_genomes_project 3 50432814 50436176 - 1700018B24Rik lincRNA lincRNA MGP_CBAJ_T0064140.1 MGP_CBAJ_G0027695.1 mouse_genomes_project 3 175344553 175450584 + MGP_CBAJ_P0064140 Wls protein_coding protein_coding MGP_CBAJ_T0064141.1 MGP_CBAJ_G0027695.1 mouse_genomes_project 3 175344618 175453325 + MGP_CBAJ_P0064141 Wls protein_coding protein_coding MGP_CBAJ_T0064142.1 MGP_CBAJ_G0027695.1 mouse_genomes_project 3 175344620 175422537 + Wls protein_coding retained_intron MGP_CBAJ_T0064143.1 MGP_CBAJ_G0027695.1 mouse_genomes_project 3 175344620 175423512 + Wls protein_coding retained_intron MGP_CBAJ_T0064144.1 MGP_CBAJ_G0027695.1 mouse_genomes_project 3 175344620 175449464 + MGP_CBAJ_P0064144 Wls protein_coding nonsense_mediated_decay MGP_CBAJ_T0064145.1 MGP_CBAJ_G0027695.1 mouse_genomes_project 3 175344791 175382333 + Wls protein_coding retained_intron MGP_CBAJ_T0064146.1 MGP_CBAJ_G0027695.1 mouse_genomes_project 3 175344823 175448921 + MGP_CBAJ_P0064146 Wls protein_coding unknown_likely_coding MGP_CBAJ_T0064147.1 MGP_CBAJ_G0027695.1 mouse_genomes_project 3 175353348 175356240 + Wls protein_coding retained_intron MGP_CBAJ_T0014118.1 MGP_CBAJ_G0012230.1 mouse_genomes_project 3 142967032 142967544 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060221.1 MGP_CBAJ_G0026865.1 mouse_genomes_project 3 38145112 38149804 + MGP_CBAJ_P0060221 Spry1 protein_coding protein_coding MGP_CBAJ_T0060222.1 MGP_CBAJ_G0026865.1 mouse_genomes_project 3 38145123 38149804 + MGP_CBAJ_P0060222 Spry1 protein_coding protein_coding MGP_CBAJ_T0060223.1 MGP_CBAJ_G0026865.1 mouse_genomes_project 3 38145245 38149804 + MGP_CBAJ_P0060223 Spry1 protein_coding protein_coding MGP_CBAJ_T0007404.1 MGP_CBAJ_G0006061.1 mouse_genomes_project 3 36673132 36675466 - Gm43204 lincRNA lincRNA MGP_CBAJ_T0013853.1 MGP_CBAJ_G0011965.1 mouse_genomes_project 3 53494900 53495219 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013787.1 MGP_CBAJ_G0011899.1 mouse_genomes_project 3 30590348 30590616 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062682.1 MGP_CBAJ_G0027416.1 mouse_genomes_project 3 116358783 116360685 + MGP_CBAJ_P0062682 Kcna3 protein_coding protein_coding MGP_CBAJ_T0062695.1 MGP_CBAJ_G0027423.1 mouse_genomes_project 3 116668547 116689376 + MGP_CBAJ_P0062695 Slc16a4 protein_coding protein_coding MGP_CBAJ_T0062696.1 MGP_CBAJ_G0027423.1 mouse_genomes_project 3 116668611 116679866 + Slc16a4 protein_coding retained_intron MGP_CBAJ_T0062697.1 MGP_CBAJ_G0027423.1 mouse_genomes_project 3 116668632 116684978 + MGP_CBAJ_P0062697 Slc16a4 protein_coding protein_coding MGP_CBAJ_T0001343.1 MGP_CBAJ_G0001269.1 mouse_genomes_project 3 167182681 167184460 + TEC TEC MGP_CBAJ_T0059736.1 MGP_CBAJ_G0026776.1 mouse_genomes_project 3 14515997 14551591 + MGP_CBAJ_P0059736 Ythdf3 protein_coding protein_coding MGP_CBAJ_T0059737.1 MGP_CBAJ_G0026776.1 mouse_genomes_project 3 14516021 14538503 + Ythdf3 protein_coding processed_transcript MGP_CBAJ_T0059738.1 MGP_CBAJ_G0026776.1 mouse_genomes_project 3 14516021 14549559 + MGP_CBAJ_P0059738 Ythdf3 protein_coding protein_coding MGP_CBAJ_T0059739.1 MGP_CBAJ_G0026776.1 mouse_genomes_project 3 14516021 14551409 + MGP_CBAJ_P0059739 Ythdf3 protein_coding protein_coding MGP_CBAJ_T0001211.1 MGP_CBAJ_G0001138.1 mouse_genomes_project 3 82950913 82952428 - TEC TEC MGP_CBAJ_T0062046.1 MGP_CBAJ_G0027270.1 mouse_genomes_project 3 103587434 103588432 + Ensa protein_coding TEC MGP_CBAJ_T0062047.1 MGP_CBAJ_G0027270.1 mouse_genomes_project 3 103587452 103594544 + MGP_CBAJ_P0062047 Ensa protein_coding protein_coding MGP_CBAJ_T0062048.1 MGP_CBAJ_G0027270.1 mouse_genomes_project 3 103587461 103594544 + MGP_CBAJ_P0062048 Ensa protein_coding protein_coding MGP_CBAJ_T0062049.1 MGP_CBAJ_G0027270.1 mouse_genomes_project 3 103587467 103589976 + Ensa protein_coding retained_intron MGP_CBAJ_T0001325.1 MGP_CBAJ_G0001251.1 mouse_genomes_project 3 148483837 148487684 + TEC TEC MGP_CBAJ_T0099222.1 MGP_CBAJ_G0037477.1 mouse_genomes_project 3 149845265 149845372 + Gm26107 snRNA snRNA MGP_CBAJ_T0063483.1 MGP_CBAJ_G0027579.1 mouse_genomes_project 3 147831254 147855856 + MGP_CBAJ_P0063483 Bdh2 protein_coding protein_coding MGP_CBAJ_T0063484.1 MGP_CBAJ_G0027579.1 mouse_genomes_project 3 147831294 147855856 + MGP_CBAJ_P0063484 Bdh2 protein_coding protein_coding MGP_CBAJ_T0063485.1 MGP_CBAJ_G0027579.1 mouse_genomes_project 3 147831316 147834450 + Bdh2 protein_coding retained_intron MGP_CBAJ_T0063486.1 MGP_CBAJ_G0027579.1 mouse_genomes_project 3 147838691 147855853 + Bdh2 protein_coding processed_transcript MGP_CBAJ_T0061773.1 MGP_CBAJ_G0027208.1 mouse_genomes_project 3 100154904 100159120 - MGP_CBAJ_P0061773 Kprp protein_coding protein_coding MGP_CBAJ_T0013883.1 MGP_CBAJ_G0011995.1 mouse_genomes_project 3 63138762 63139277 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060021.1 MGP_CBAJ_G0026833.1 mouse_genomes_project 3 32696685 32709001 + MGP_CBAJ_P0060021 Actl6a protein_coding protein_coding MGP_CBAJ_T0060022.1 MGP_CBAJ_G0026833.1 mouse_genomes_project 3 32698894 32717361 + MGP_CBAJ_P0060022 Actl6a protein_coding protein_coding MGP_CBAJ_T0060023.1 MGP_CBAJ_G0026833.1 mouse_genomes_project 3 32698937 32700394 + Actl6a protein_coding retained_intron MGP_CBAJ_T0060024.1 MGP_CBAJ_G0026833.1 mouse_genomes_project 3 32699152 32708995 + MGP_CBAJ_P0060024 Actl6a protein_coding nonsense_mediated_decay MGP_CBAJ_T0060025.1 MGP_CBAJ_G0026833.1 mouse_genomes_project 3 32699551 32709044 + MGP_CBAJ_P0060025 Actl6a protein_coding protein_coding MGP_CBAJ_T0060026.1 MGP_CBAJ_G0026833.1 mouse_genomes_project 3 32701770 32702558 + Actl6a protein_coding retained_intron MGP_CBAJ_T0060027.1 MGP_CBAJ_G0026833.1 mouse_genomes_project 3 32702559 32717161 + MGP_CBAJ_P0060027 Actl6a protein_coding nonsense_mediated_decay MGP_CBAJ_T0060028.1 MGP_CBAJ_G0026833.1 mouse_genomes_project 3 32708954 32717356 + Actl6a protein_coding retained_intron MGP_CBAJ_T0001355.1 MGP_CBAJ_G0001281.1 mouse_genomes_project 3 172332946 172336121 + TEC TEC MGP_CBAJ_T0061782.1 MGP_CBAJ_G0027216.1 mouse_genomes_project 3 100392903 100394130 - MGP_CBAJ_P0061782 Lce1m protein_coding protein_coding MGP_CBAJ_T0061783.1 MGP_CBAJ_G0027216.1 mouse_genomes_project 3 100393576 100394129 - MGP_CBAJ_P0061783 Lce1m protein_coding protein_coding MGP_CBAJ_T0014129.1 MGP_CBAJ_G0012241.1 mouse_genomes_project 3 146823833 146824332 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060157.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37300072 37327468 + 4932438A13Rik protein_coding retained_intron MGP_CBAJ_T0060158.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37300074 37513817 + MGP_CBAJ_P0060158 4932438A13Rik protein_coding protein_coding MGP_CBAJ_T0060159.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37300089 37326171 + 4932438A13Rik protein_coding retained_intron MGP_CBAJ_T0060160.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37300089 37386689 + 4932438A13Rik protein_coding retained_intron MGP_CBAJ_T0060161.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37300096 37513804 + MGP_CBAJ_P0060161 4932438A13Rik protein_coding unknown_likely_coding MGP_CBAJ_T0060162.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37300124 37391446 + MGP_CBAJ_P0060162 4932438A13Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0060163.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37301437 37372987 + 4932438A13Rik protein_coding retained_intron MGP_CBAJ_T0060164.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37306970 37513817 + MGP_CBAJ_P0060164 4932438A13Rik protein_coding protein_coding MGP_CBAJ_T0060165.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37306983 37326178 + 4932438A13Rik protein_coding retained_intron MGP_CBAJ_T0060166.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37327945 37332594 + 4932438A13Rik protein_coding retained_intron MGP_CBAJ_T0060167.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37332503 37391448 + MGP_CBAJ_P0060167 4932438A13Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0060168.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37340819 37359751 + 4932438A13Rik protein_coding retained_intron MGP_CBAJ_T0060169.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37389514 37391443 + 4932438A13Rik protein_coding retained_intron MGP_CBAJ_T0060170.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37458934 37513799 + MGP_CBAJ_P0060170 4932438A13Rik protein_coding protein_coding MGP_CBAJ_T0060171.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37463358 37513800 + MGP_CBAJ_P0060171 4932438A13Rik protein_coding protein_coding MGP_CBAJ_T0060172.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37463489 37513798 + MGP_CBAJ_P0060172 4932438A13Rik protein_coding protein_coding MGP_CBAJ_T0060173.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37466287 37483464 + MGP_CBAJ_P0060173 4932438A13Rik protein_coding protein_coding MGP_CBAJ_T0060174.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37470612 37475611 + 4932438A13Rik protein_coding retained_intron MGP_CBAJ_T0060175.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37471935 37475841 + 4932438A13Rik protein_coding retained_intron MGP_CBAJ_T0060176.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37476183 37491270 + 4932438A13Rik protein_coding retained_intron MGP_CBAJ_T0060177.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37491252 37494361 + 4932438A13Rik protein_coding retained_intron MGP_CBAJ_T0060178.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37491949 37494363 + 4932438A13Rik protein_coding retained_intron MGP_CBAJ_T0060179.1 MGP_CBAJ_G0026856.1 mouse_genomes_project 3 37499278 37502022 + 4932438A13Rik protein_coding retained_intron MGP_CBAJ_T0007683.1 MGP_CBAJ_G0006275.1 mouse_genomes_project 3 171845101 171861936 - 4930570G19Rik lincRNA lincRNA MGP_CBAJ_T0007684.1 MGP_CBAJ_G0006275.1 mouse_genomes_project 3 171845109 171861831 - 4930570G19Rik lincRNA lincRNA MGP_CBAJ_T0007685.1 MGP_CBAJ_G0006275.1 mouse_genomes_project 3 171846768 171861924 - 4930570G19Rik lincRNA lincRNA MGP_CBAJ_T0007686.1 MGP_CBAJ_G0006275.1 mouse_genomes_project 3 171858089 171861995 - 4930570G19Rik lincRNA lincRNA MGP_CBAJ_T0013753.1 MGP_CBAJ_G0011865.1 mouse_genomes_project 3 15667387 15668726 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011426.1 MGP_CBAJ_G0009564.1 mouse_genomes_project 3 170218804 170218915 + Gm26456 misc_RNA misc_RNA MGP_CBAJ_T0060193.1 MGP_CBAJ_G0026861.1 mouse_genomes_project 3 37793604 37802502 + MGP_CBAJ_P0060193 Bbs12 protein_coding protein_coding MGP_CBAJ_T0060194.1 MGP_CBAJ_G0026861.1 mouse_genomes_project 3 37793606 37802505 + MGP_CBAJ_P0060194 Bbs12 protein_coding protein_coding MGP_CBAJ_T0061006.1 MGP_CBAJ_G0027035.1 mouse_genomes_project 3 90497286 90600732 - MGP_CBAJ_P0061006 protein_coding protein_coding MGP_CBAJ_T0061008.1 MGP_CBAJ_G0027035.1 mouse_genomes_project 3 90498397 90600683 - MGP_CBAJ_P0061008 protein_coding protein_coding MGP_CBAJ_T0061009.1 MGP_CBAJ_G0027035.1 mouse_genomes_project 3 90498929 90600823 - MGP_CBAJ_P0061009 protein_coding protein_coding MGP_CBAJ_T0001279.1 MGP_CBAJ_G0001206.1 mouse_genomes_project 3 137985568 137990735 + TEC TEC MGP_CBAJ_T0004132.1 MGP_CBAJ_G0003639.1 mouse_genomes_project 3 30553189 30554160 - 4933429H19Rik antisense antisense MGP_CBAJ_T0004133.1 MGP_CBAJ_G0003639.1 mouse_genomes_project 3 30553733 30554156 - 4933429H19Rik antisense antisense MGP_CBAJ_T0007477.1 MGP_CBAJ_G0006115.1 mouse_genomes_project 3 80710233 80745170 + lincRNA lincRNA MGP_CBAJ_T0007342.1 MGP_CBAJ_G0006015.1 mouse_genomes_project 3 2024408 2028909 + Gm17308 lincRNA lincRNA MGP_CBAJ_T0007437.1 MGP_CBAJ_G0006084.1 mouse_genomes_project 3 53464420 53472495 + Gm5103 lincRNA lincRNA MGP_CBAJ_T0007438.1 MGP_CBAJ_G0006084.1 mouse_genomes_project 3 53464472 53472502 + Gm5103 lincRNA lincRNA MGP_CBAJ_T0099179.1 MGP_CBAJ_G0037434.1 mouse_genomes_project 3 84590100 84590204 + Gm24150 snRNA snRNA MGP_CBAJ_T0004302.1 MGP_CBAJ_G0003753.1 mouse_genomes_project 3 150724669 150726872 - Gm43087 antisense antisense MGP_CBAJ_T0060866.1 MGP_CBAJ_G0027003.1 mouse_genomes_project 3 84741466 84858752 + MGP_CBAJ_P0060866 protein_coding protein_coding MGP_CBAJ_T0060867.1 MGP_CBAJ_G0027003.1 mouse_genomes_project 3 84758430 84896250 + MGP_CBAJ_P0060867 protein_coding protein_coding MGP_CBAJ_T0060868.1 MGP_CBAJ_G0027003.1 mouse_genomes_project 3 84758433 84860010 + MGP_CBAJ_P0060868 protein_coding protein_coding MGP_CBAJ_T0007601.1 MGP_CBAJ_G0006208.1 mouse_genomes_project 3 142957909 142962390 - lincRNA lincRNA MGP_CBAJ_T0059720.1 MGP_CBAJ_G0026769.1 mouse_genomes_project 3 13038429 13040509 + Car3 protein_coding retained_intron MGP_CBAJ_T0059721.1 MGP_CBAJ_G0026769.1 mouse_genomes_project 3 13038455 13047545 + MGP_CBAJ_P0059721 Car3 protein_coding protein_coding MGP_CBAJ_T0059722.1 MGP_CBAJ_G0026769.1 mouse_genomes_project 3 13044184 13047093 + Car3 protein_coding retained_intron MGP_CBAJ_T0007633.1 MGP_CBAJ_G0006237.1 mouse_genomes_project 3 156659938 156710641 + Gm43614 lincRNA lincRNA MGP_CBAJ_T0014136.1 MGP_CBAJ_G0012248.1 mouse_genomes_project 3 147749597 147750022 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013881.1 MGP_CBAJ_G0011993.1 mouse_genomes_project 3 62772321 62772463 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061467.1 MGP_CBAJ_G0027121.1 mouse_genomes_project 3 96114615 96126001 - MGP_CBAJ_P0061467 Adam15 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061468.1 MGP_CBAJ_G0027121.1 mouse_genomes_project 3 96115713 96126008 - MGP_CBAJ_P0061468 Adam15 protein_coding protein_coding MGP_CBAJ_T0061469.1 MGP_CBAJ_G0027121.1 mouse_genomes_project 3 96115713 96126015 - MGP_CBAJ_P0061469 Adam15 protein_coding protein_coding MGP_CBAJ_T0061470.1 MGP_CBAJ_G0027121.1 mouse_genomes_project 3 96115714 96117231 - Adam15 protein_coding processed_transcript MGP_CBAJ_T0061471.1 MGP_CBAJ_G0027121.1 mouse_genomes_project 3 96115717 96116514 - Adam15 protein_coding processed_transcript MGP_CBAJ_T0061472.1 MGP_CBAJ_G0027121.1 mouse_genomes_project 3 96115717 96125978 - MGP_CBAJ_P0061472 Adam15 protein_coding protein_coding MGP_CBAJ_T0061473.1 MGP_CBAJ_G0027121.1 mouse_genomes_project 3 96115721 96125994 - MGP_CBAJ_P0061473 Adam15 protein_coding protein_coding MGP_CBAJ_T0061474.1 MGP_CBAJ_G0027121.1 mouse_genomes_project 3 96115818 96116426 - Adam15 protein_coding retained_intron MGP_CBAJ_T0061475.1 MGP_CBAJ_G0027121.1 mouse_genomes_project 3 96115988 96116993 - Adam15 protein_coding retained_intron MGP_CBAJ_T0061476.1 MGP_CBAJ_G0027121.1 mouse_genomes_project 3 96116147 96119753 - Adam15 protein_coding retained_intron MGP_CBAJ_T0061477.1 MGP_CBAJ_G0027121.1 mouse_genomes_project 3 96118805 96125993 - Adam15 protein_coding retained_intron MGP_CBAJ_T0061478.1 MGP_CBAJ_G0027121.1 mouse_genomes_project 3 96122546 96125979 - Adam15 protein_coding retained_intron MGP_CBAJ_T0061479.1 MGP_CBAJ_G0027121.1 mouse_genomes_project 3 96124536 96125126 - Adam15 protein_coding processed_transcript MGP_CBAJ_T0101880.1 MGP_CBAJ_G0039911.1 mouse_genomes_project 3 172136505 172136980 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010390.1 MGP_CBAJ_G0008528.1 mouse_genomes_project 3 60435303 60435417 + Mir6377 miRNA miRNA MGP_CBAJ_T0060634.1 MGP_CBAJ_G0026947.1 mouse_genomes_project 3 64268281 64274467 + MGP_CBAJ_P0060634 P2ry1 protein_coding protein_coding MGP_CBAJ_T0060635.1 MGP_CBAJ_G0026947.1 mouse_genomes_project 3 64268281 64274464 + MGP_CBAJ_P0060635 P2ry1 protein_coding protein_coding MGP_CBAJ_T0060636.1 MGP_CBAJ_G0026947.1 mouse_genomes_project 3 64268285 64270486 + MGP_CBAJ_P0060636 P2ry1 protein_coding protein_coding MGP_CBAJ_T0062958.1 MGP_CBAJ_G0027482.1 mouse_genomes_project 3 126375077 126376089 + Extl2 protein_coding processed_transcript MGP_CBAJ_T0062959.1 MGP_CBAJ_G0027482.1 mouse_genomes_project 3 126375115 126391697 + Extl2 protein_coding processed_transcript MGP_CBAJ_T0062960.1 MGP_CBAJ_G0027482.1 mouse_genomes_project 3 126375420 126378460 + Extl2 protein_coding processed_transcript MGP_CBAJ_T0062961.1 MGP_CBAJ_G0027482.1 mouse_genomes_project 3 126378283 126395573 + MGP_CBAJ_P0062961 Extl2 protein_coding protein_coding MGP_CBAJ_T0013992.1 MGP_CBAJ_G0012104.1 mouse_genomes_project 3 100895954 100896506 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062690.1 MGP_CBAJ_G0027421.1 mouse_genomes_project 3 116601573 116607421 - MGP_CBAJ_P0062690 Prok1 protein_coding protein_coding MGP_CBAJ_T0062691.1 MGP_CBAJ_G0027421.1 mouse_genomes_project 3 116601589 116606037 - Prok1 protein_coding retained_intron MGP_CBAJ_T0062692.1 MGP_CBAJ_G0027421.1 mouse_genomes_project 3 116603907 116608476 - MGP_CBAJ_P0062692 Prok1 protein_coding protein_coding MGP_CBAJ_T0059711.1 MGP_CBAJ_G0026766.1 mouse_genomes_project 3 12732552 12740235 - MGP_CBAJ_P0059711 1810022K09Rik protein_coding protein_coding MGP_CBAJ_T0059712.1 MGP_CBAJ_G0026766.1 mouse_genomes_project 3 12732557 12740171 - MGP_CBAJ_P0059712 1810022K09Rik protein_coding protein_coding MGP_CBAJ_T0059713.1 MGP_CBAJ_G0026766.1 mouse_genomes_project 3 12732557 12740211 - MGP_CBAJ_P0059713 1810022K09Rik protein_coding protein_coding MGP_CBAJ_T0059714.1 MGP_CBAJ_G0026766.1 mouse_genomes_project 3 12732561 12740204 - MGP_CBAJ_P0059714 1810022K09Rik protein_coding protein_coding MGP_CBAJ_T0059715.1 MGP_CBAJ_G0026766.1 mouse_genomes_project 3 12738133 12740193 - 1810022K09Rik protein_coding retained_intron MGP_CBAJ_T0063025.1 MGP_CBAJ_G0027495.1 mouse_genomes_project 3 127334612 127391509 + MGP_CBAJ_P0063025 Frrs1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063026.1 MGP_CBAJ_G0027495.1 mouse_genomes_project 3 127334612 127406725 + MGP_CBAJ_P0063026 Frrs1 protein_coding protein_coding MGP_CBAJ_T0063027.1 MGP_CBAJ_G0027495.1 mouse_genomes_project 3 127371800 127411347 + MGP_CBAJ_P0063027 Frrs1 protein_coding protein_coding MGP_CBAJ_T0063028.1 MGP_CBAJ_G0027495.1 mouse_genomes_project 3 127391429 127397212 + Frrs1 protein_coding retained_intron MGP_CBAJ_T0063029.1 MGP_CBAJ_G0027495.1 mouse_genomes_project 3 127392179 127399600 + Frrs1 protein_coding retained_intron MGP_CBAJ_T0063030.1 MGP_CBAJ_G0027495.1 mouse_genomes_project 3 127397200 127405688 + MGP_CBAJ_P0063030 Frrs1 protein_coding protein_coding MGP_CBAJ_T0004224.1 MGP_CBAJ_G0003705.1 mouse_genomes_project 3 104679182 104682998 - Gm15441 antisense antisense MGP_CBAJ_T0004225.1 MGP_CBAJ_G0003705.1 mouse_genomes_project 3 104679205 104692008 - Gm15441 antisense antisense MGP_CBAJ_T0007616.1 MGP_CBAJ_G0006222.1 mouse_genomes_project 3 149127080 149142784 - 1700030L20Rik lincRNA lincRNA MGP_CBAJ_T0063126.1 MGP_CBAJ_G0027513.1 mouse_genomes_project 3 133393169 133418144 + MGP_CBAJ_P0063126 Gclm protein_coding protein_coding MGP_CBAJ_T0063127.1 MGP_CBAJ_G0027513.1 mouse_genomes_project 3 133393171 133414227 + MGP_CBAJ_P0063127 Gclm protein_coding protein_coding MGP_CBAJ_T0063128.1 MGP_CBAJ_G0027513.1 mouse_genomes_project 3 133393264 133416972 + MGP_CBAJ_P0063128 Gclm protein_coding protein_coding MGP_CBAJ_T0063129.1 MGP_CBAJ_G0027513.1 mouse_genomes_project 3 133412930 133418002 + Gclm protein_coding retained_intron MGP_CBAJ_T0060439.1 MGP_CBAJ_G0026904.1 mouse_genomes_project 3 57196560 57234845 + MGP_CBAJ_P0060439 Supt20 protein_coding protein_coding MGP_CBAJ_T0060440.1 MGP_CBAJ_G0026904.1 mouse_genomes_project 3 57196576 57234971 + MGP_CBAJ_P0060440 Supt20 protein_coding protein_coding MGP_CBAJ_T0060441.1 MGP_CBAJ_G0026904.1 mouse_genomes_project 3 57196576 57234971 + MGP_CBAJ_P0060441 Supt20 protein_coding protein_coding MGP_CBAJ_T0060442.1 MGP_CBAJ_G0026904.1 mouse_genomes_project 3 57196578 57234975 + MGP_CBAJ_P0060442 Supt20 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060443.1 MGP_CBAJ_G0026904.1 mouse_genomes_project 3 57196588 57213422 + MGP_CBAJ_P0060443 Supt20 protein_coding protein_coding MGP_CBAJ_T0060444.1 MGP_CBAJ_G0026904.1 mouse_genomes_project 3 57196611 57219294 + Supt20 protein_coding retained_intron MGP_CBAJ_T0060445.1 MGP_CBAJ_G0026904.1 mouse_genomes_project 3 57196611 57199108 + Supt20 protein_coding retained_intron MGP_CBAJ_T0060446.1 MGP_CBAJ_G0026904.1 mouse_genomes_project 3 57196611 57200072 + Supt20 protein_coding retained_intron MGP_CBAJ_T0060447.1 MGP_CBAJ_G0026904.1 mouse_genomes_project 3 57196615 57213653 + MGP_CBAJ_P0060447 Supt20 protein_coding protein_coding MGP_CBAJ_T0060448.1 MGP_CBAJ_G0026904.1 mouse_genomes_project 3 57196858 57223377 + MGP_CBAJ_P0060448 Supt20 protein_coding protein_coding MGP_CBAJ_T0060449.1 MGP_CBAJ_G0026904.1 mouse_genomes_project 3 57196866 57234972 + MGP_CBAJ_P0060449 Supt20 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060450.1 MGP_CBAJ_G0026904.1 mouse_genomes_project 3 57218779 57220892 + Supt20 protein_coding retained_intron MGP_CBAJ_T0060146.1 MGP_CBAJ_G0026854.1 mouse_genomes_project 3 37001367 37050259 - MGP_CBAJ_P0060146 Bbs7 protein_coding protein_coding MGP_CBAJ_T0060147.1 MGP_CBAJ_G0026854.1 mouse_genomes_project 3 37001367 37050347 - MGP_CBAJ_P0060147 Bbs7 protein_coding protein_coding MGP_CBAJ_T0060148.1 MGP_CBAJ_G0026854.1 mouse_genomes_project 3 37003098 37050155 - MGP_CBAJ_P0060148 Bbs7 protein_coding protein_coding MGP_CBAJ_T0060149.1 MGP_CBAJ_G0026854.1 mouse_genomes_project 3 37004009 37005521 - Bbs7 protein_coding retained_intron MGP_CBAJ_T0060150.1 MGP_CBAJ_G0026854.1 mouse_genomes_project 3 37044414 37050259 - Bbs7 protein_coding retained_intron MGP_CBAJ_T0060151.1 MGP_CBAJ_G0026854.1 mouse_genomes_project 3 37045241 37050259 - MGP_CBAJ_P0060151 Bbs7 protein_coding protein_coding MGP_CBAJ_T0062340.1 MGP_CBAJ_G0027342.1 mouse_genomes_project 3 108622802 108668443 + MGP_CBAJ_P0062340 Gdap2 protein_coding protein_coding MGP_CBAJ_T0062341.1 MGP_CBAJ_G0027342.1 mouse_genomes_project 3 108622939 108663942 + MGP_CBAJ_P0062341 Gdap2 protein_coding protein_coding MGP_CBAJ_T0062342.1 MGP_CBAJ_G0027342.1 mouse_genomes_project 3 108622965 108630441 + Gdap2 protein_coding processed_transcript MGP_CBAJ_T0062343.1 MGP_CBAJ_G0027342.1 mouse_genomes_project 3 108656057 108668117 + MGP_CBAJ_P0062343 Gdap2 protein_coding protein_coding MGP_CBAJ_T0062344.1 MGP_CBAJ_G0027342.1 mouse_genomes_project 3 108662158 108663942 + Gdap2 protein_coding retained_intron MGP_CBAJ_T0001147.1 MGP_CBAJ_G0001076.1 mouse_genomes_project 3 53345334 53346959 + TEC TEC MGP_CBAJ_T0060771.1 MGP_CBAJ_G0026982.1 mouse_genomes_project 3 72846740 72960917 - Ift80 protein_coding retained_intron MGP_CBAJ_T0060772.1 MGP_CBAJ_G0026982.1 mouse_genomes_project 3 72846740 72960901 - MGP_CBAJ_P0060772 Ift80 protein_coding protein_coding MGP_CBAJ_T0060773.1 MGP_CBAJ_G0026982.1 mouse_genomes_project 3 72846766 72960928 - MGP_CBAJ_P0060773 Ift80 protein_coding protein_coding MGP_CBAJ_T0060774.1 MGP_CBAJ_G0026982.1 mouse_genomes_project 3 72846766 72951019 - MGP_CBAJ_P0060774 Ift80 protein_coding protein_coding MGP_CBAJ_T0060775.1 MGP_CBAJ_G0026982.1 mouse_genomes_project 3 72847886 72869595 - Ift80 protein_coding retained_intron MGP_CBAJ_T0060776.1 MGP_CBAJ_G0026982.1 mouse_genomes_project 3 72864525 72864875 - Ift80 protein_coding retained_intron MGP_CBAJ_T0060777.1 MGP_CBAJ_G0026982.1 mouse_genomes_project 3 72867204 72960856 - Ift80 protein_coding retained_intron MGP_CBAJ_T0060778.1 MGP_CBAJ_G0026982.1 mouse_genomes_project 3 72886853 72930325 - Ift80 protein_coding processed_transcript MGP_CBAJ_T0060779.1 MGP_CBAJ_G0026982.1 mouse_genomes_project 3 72920225 72960835 - MGP_CBAJ_P0060779 Ift80 protein_coding protein_coding MGP_CBAJ_T0060780.1 MGP_CBAJ_G0026982.1 mouse_genomes_project 3 72924510 72960842 - MGP_CBAJ_P0060780 Ift80 protein_coding protein_coding MGP_CBAJ_T0060781.1 MGP_CBAJ_G0026982.1 mouse_genomes_project 3 72929883 72960746 - Ift80 protein_coding processed_transcript MGP_CBAJ_T0060782.1 MGP_CBAJ_G0026982.1 mouse_genomes_project 3 72958652 72960883 - Ift80 protein_coding retained_intron MGP_CBAJ_T0010419.1 MGP_CBAJ_G0008557.1 mouse_genomes_project 3 127898908 127898973 + Gm22408 miRNA miRNA MGP_CBAJ_T0001332.1 MGP_CBAJ_G0001258.1 mouse_genomes_project 3 160361249 160362589 + TEC TEC MGP_CBAJ_T0063352.1 MGP_CBAJ_G0027552.1 mouse_genomes_project 3 141920001 141939343 + MGP_CBAJ_P0063352 Pla2g12a protein_coding protein_coding MGP_CBAJ_T0063353.1 MGP_CBAJ_G0027552.1 mouse_genomes_project 3 141920209 141938457 + MGP_CBAJ_P0063353 Pla2g12a protein_coding nonsense_mediated_decay MGP_CBAJ_T0063354.1 MGP_CBAJ_G0027552.1 mouse_genomes_project 3 141922575 141938475 + MGP_CBAJ_P0063354 Pla2g12a protein_coding protein_coding MGP_CBAJ_T0063355.1 MGP_CBAJ_G0027552.1 mouse_genomes_project 3 141936347 141939339 + Pla2g12a protein_coding retained_intron MGP_CBAJ_T0059627.1 MGP_CBAJ_G0026740.1 mouse_genomes_project 3 4520975 4604720 + MGP_CBAJ_P0059627 Pkia protein_coding protein_coding MGP_CBAJ_T0059628.1 MGP_CBAJ_G0026740.1 mouse_genomes_project 3 4520976 4613673 + MGP_CBAJ_P0059628 Pkia protein_coding protein_coding MGP_CBAJ_T0059629.1 MGP_CBAJ_G0026740.1 mouse_genomes_project 3 4593874 4610719 + MGP_CBAJ_P0059629 Pkia protein_coding protein_coding MGP_CBAJ_T0013723.1 MGP_CBAJ_G0011835.1 mouse_genomes_project 3 6458915 6459237 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014161.1 MGP_CBAJ_G0012273.1 mouse_genomes_project 3 155594173 155594513 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099226.1 MGP_CBAJ_G0037481.1 mouse_genomes_project 3 156338296 156338401 - Gm24457 snRNA snRNA MGP_CBAJ_T0013994.1 MGP_CBAJ_G0012106.1 mouse_genomes_project 3 102109867 102110756 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001258.1 MGP_CBAJ_G0001185.1 mouse_genomes_project 3 129240733 129244864 + TEC TEC MGP_CBAJ_T0004181.1 MGP_CBAJ_G0003676.1 mouse_genomes_project 3 85334949 85362422 - Gm36569 antisense antisense MGP_CBAJ_T0007680.1 MGP_CBAJ_G0006272.1 mouse_genomes_project 3 168754569 168757342 - 5730460C07Rik lincRNA lincRNA MGP_CBAJ_T0011406.1 MGP_CBAJ_G0009544.1 mouse_genomes_project 3 30321555 30321967 - 1600017P15Rik misc_RNA misc_RNA MGP_CBAJ_T0061538.1 MGP_CBAJ_G0027135.1 mouse_genomes_project 3 96617707 96628004 + MGP_CBAJ_P0061538 Ube2q1 protein_coding protein_coding MGP_CBAJ_T0061539.1 MGP_CBAJ_G0027135.1 mouse_genomes_project 3 96617855 96621415 + Ube2q1 protein_coding retained_intron MGP_CBAJ_T0007582.1 MGP_CBAJ_G0006193.1 mouse_genomes_project 3 132737193 132749947 - Gm43608 lincRNA lincRNA MGP_CBAJ_T0004148.1 MGP_CBAJ_G0003649.1 mouse_genomes_project 3 37512999 37520840 - Gm12531 antisense antisense MGP_CBAJ_T0004149.1 MGP_CBAJ_G0003649.1 mouse_genomes_project 3 37513001 37520835 - Gm12531 antisense antisense MGP_CBAJ_T0100454.1 MGP_CBAJ_G0038709.1 mouse_genomes_project 3 74056578 74056709 - Gm23484 snoRNA snoRNA MGP_CBAJ_T0062781.1 MGP_CBAJ_G0027445.1 mouse_genomes_project 3 117689435 117694877 + MGP_CBAJ_P0062781 Amigo1 protein_coding protein_coding MGP_CBAJ_T0062782.1 MGP_CBAJ_G0027445.1 mouse_genomes_project 3 117689450 117694878 + MGP_CBAJ_P0062782 Amigo1 protein_coding protein_coding MGP_CBAJ_T0062783.1 MGP_CBAJ_G0027445.1 mouse_genomes_project 3 117689458 117695387 + MGP_CBAJ_P0062783 Amigo1 protein_coding protein_coding MGP_CBAJ_T0062784.1 MGP_CBAJ_G0027445.1 mouse_genomes_project 3 117691143 117694876 + MGP_CBAJ_P0062784 Amigo1 protein_coding protein_coding MGP_CBAJ_T0062785.1 MGP_CBAJ_G0027445.1 mouse_genomes_project 3 117691201 117694868 + MGP_CBAJ_P0062785 Amigo1 protein_coding protein_coding MGP_CBAJ_T0060822.1 MGP_CBAJ_G0026993.1 mouse_genomes_project 3 77629650 77642495 - MGP_CBAJ_P0060822 Slitrk3 protein_coding protein_coding MGP_CBAJ_T0060823.1 MGP_CBAJ_G0026993.1 mouse_genomes_project 3 77630510 77643265 - MGP_CBAJ_P0060823 Slitrk3 protein_coding protein_coding MGP_CBAJ_T0004281.1 MGP_CBAJ_G0003738.1 mouse_genomes_project 3 135747919 135749608 + Gm42823 antisense antisense MGP_CBAJ_T0013972.1 MGP_CBAJ_G0012084.1 mouse_genomes_project 3 95215128 95218129 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0063406.1 MGP_CBAJ_G0027562.1 mouse_genomes_project 3 143417056 143455707 - MGP_CBAJ_P0063406 Hadh protein_coding protein_coding MGP_CBAJ_T0063407.1 MGP_CBAJ_G0027562.1 mouse_genomes_project 3 143428738 143455630 - Hadh protein_coding retained_intron MGP_CBAJ_T0007372.1 MGP_CBAJ_G0006032.1 mouse_genomes_project 3 16879257 16996540 - lincRNA lincRNA MGP_CBAJ_T0007374.1 MGP_CBAJ_G0006034.1 mouse_genomes_project 3 18569695 18570778 + lincRNA lincRNA MGP_CBAJ_T0007375.1 MGP_CBAJ_G0006034.1 mouse_genomes_project 3 18569707 18579011 + lincRNA lincRNA MGP_CBAJ_T0007387.1 MGP_CBAJ_G0006046.1 mouse_genomes_project 3 29556122 29589238 + Mannr lincRNA lincRNA MGP_CBAJ_T0007346.1 MGP_CBAJ_G0006018.1 mouse_genomes_project 3 5944374 5948778 + Gm32496 lincRNA lincRNA MGP_CBAJ_T0001197.1 MGP_CBAJ_G0001124.1 mouse_genomes_project 3 69520706 69522267 - TEC TEC MGP_CBAJ_T0001218.1 MGP_CBAJ_G0001145.1 mouse_genomes_project 3 92068853 92070393 + TEC TEC MGP_CBAJ_T0014128.1 MGP_CBAJ_G0012240.1 mouse_genomes_project 3 146710073 146710539 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017730.1 MGP_CBAJ_G0015261.1 mouse_genomes_project 3 117907226 117918282 - processed_transcript processed_transcript MGP_CBAJ_T0100485.1 MGP_CBAJ_G0038740.1 mouse_genomes_project 3 126907043 126907140 + Gm26358 snoRNA snoRNA MGP_CBAJ_T0062316.1 MGP_CBAJ_G0027335.1 mouse_genomes_project 3 107239827 107248656 - MGP_CBAJ_P0062316 Hsd3b6 protein_coding protein_coding MGP_CBAJ_T0062317.1 MGP_CBAJ_G0027335.1 mouse_genomes_project 3 107239828 107245381 - MGP_CBAJ_P0062317 Hsd3b6 protein_coding protein_coding MGP_CBAJ_T0062318.1 MGP_CBAJ_G0027335.1 mouse_genomes_project 3 107240800 107248635 - Hsd3b6 protein_coding processed_transcript MGP_CBAJ_T0061461.1 MGP_CBAJ_G0027118.1 mouse_genomes_project 3 96045871 96053764 - MGP_CBAJ_P0061461 Efna1 protein_coding protein_coding MGP_CBAJ_T0061462.1 MGP_CBAJ_G0027118.1 mouse_genomes_project 3 96046623 96053665 - MGP_CBAJ_P0061462 Efna1 protein_coding protein_coding MGP_CBAJ_T0098343.1 MGP_CBAJ_G0036609.1 mouse_genomes_project 3 111222578 111225484 + Gm42679 sense_intronic sense_intronic MGP_CBAJ_T0001318.1 MGP_CBAJ_G0001244.1 mouse_genomes_project 3 145358587 145360361 - TEC TEC MGP_CBAJ_T0061015.1 MGP_CBAJ_G0027039.1 mouse_genomes_project 3 90870152 91059177 + MGP_CBAJ_P0061015 Fbxw7 protein_coding protein_coding MGP_CBAJ_T0061016.1 MGP_CBAJ_G0027039.1 mouse_genomes_project 3 90870362 91057661 + Fbxw7 protein_coding retained_intron MGP_CBAJ_T0061017.1 MGP_CBAJ_G0027039.1 mouse_genomes_project 3 90926478 91059177 + MGP_CBAJ_P0061017 Fbxw7 protein_coding protein_coding MGP_CBAJ_T0061018.1 MGP_CBAJ_G0027039.1 mouse_genomes_project 3 91005633 91059176 + MGP_CBAJ_P0061018 Fbxw7 protein_coding protein_coding MGP_CBAJ_T0061019.1 MGP_CBAJ_G0027039.1 mouse_genomes_project 3 91032210 91057624 + MGP_CBAJ_P0061019 Fbxw7 protein_coding protein_coding MGP_CBAJ_T0010382.1 MGP_CBAJ_G0008520.1 mouse_genomes_project 3 34799337 34799416 + Mir1897 miRNA miRNA MGP_CBAJ_T0013995.1 MGP_CBAJ_G0012107.1 mouse_genomes_project 3 102489287 102489660 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061779.1 MGP_CBAJ_G0027214.1 mouse_genomes_project 3 100332923 100334039 + MGP_CBAJ_P0061779 protein_coding protein_coding MGP_CBAJ_T0007593.1 MGP_CBAJ_G0006202.1 mouse_genomes_project 3 139762835 139764966 + Gm43053 lincRNA lincRNA MGP_CBAJ_T0001190.1 MGP_CBAJ_G0001117.1 mouse_genomes_project 3 62288864 62290376 + TEC TEC MGP_CBAJ_T0063107.1 MGP_CBAJ_G0027511.1 mouse_genomes_project 3 133046894 133070861 + MGP_CBAJ_P0063107 Arhgap29 protein_coding protein_coding MGP_CBAJ_T0063108.1 MGP_CBAJ_G0027511.1 mouse_genomes_project 3 133047582 133118355 + MGP_CBAJ_P0063108 Arhgap29 protein_coding protein_coding MGP_CBAJ_T0063109.1 MGP_CBAJ_G0027511.1 mouse_genomes_project 3 133047583 133085851 + MGP_CBAJ_P0063109 Arhgap29 protein_coding protein_coding MGP_CBAJ_T0063110.1 MGP_CBAJ_G0027511.1 mouse_genomes_project 3 133064760 133089726 + MGP_CBAJ_P0063110 Arhgap29 protein_coding protein_coding MGP_CBAJ_T0063111.1 MGP_CBAJ_G0027511.1 mouse_genomes_project 3 133064760 133111516 + MGP_CBAJ_P0063111 Arhgap29 protein_coding protein_coding MGP_CBAJ_T0063112.1 MGP_CBAJ_G0027511.1 mouse_genomes_project 3 133064863 133116577 + MGP_CBAJ_P0063112 Arhgap29 protein_coding protein_coding MGP_CBAJ_T0063113.1 MGP_CBAJ_G0027511.1 mouse_genomes_project 3 133078484 133089821 + Arhgap29 protein_coding retained_intron MGP_CBAJ_T0063114.1 MGP_CBAJ_G0027511.1 mouse_genomes_project 3 133085803 133089495 + Arhgap29 protein_coding retained_intron MGP_CBAJ_T0063115.1 MGP_CBAJ_G0027511.1 mouse_genomes_project 3 133099917 133107400 + Arhgap29 protein_coding retained_intron MGP_CBAJ_T0013865.1 MGP_CBAJ_G0011977.1 mouse_genomes_project 3 59574379 59574850 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013736.1 MGP_CBAJ_G0011848.1 mouse_genomes_project 3 10524244 10524830 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0062680.1 MGP_CBAJ_G0027414.1 mouse_genomes_project 3 116065851 116098004 - MGP_CBAJ_P0062680 Cd53 protein_coding protein_coding MGP_CBAJ_T0007363.1 MGP_CBAJ_G0006029.1 mouse_genomes_project 3 13353148 13378066 - Gm33819 lincRNA lincRNA MGP_CBAJ_T0013999.1 MGP_CBAJ_G0012111.1 mouse_genomes_project 3 103348972 103349372 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101857.1 MGP_CBAJ_G0039888.1 mouse_genomes_project 3 94959319 94960412 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0061197.1 MGP_CBAJ_G0027080.1 mouse_genomes_project 3 94861015 94867306 + MGP_CBAJ_P0061197 Glmp protein_coding protein_coding MGP_CBAJ_T0061198.1 MGP_CBAJ_G0027080.1 mouse_genomes_project 3 94861047 94865504 + Glmp protein_coding retained_intron MGP_CBAJ_T0061199.1 MGP_CBAJ_G0027080.1 mouse_genomes_project 3 94861050 94862571 + Glmp protein_coding retained_intron MGP_CBAJ_T0061200.1 MGP_CBAJ_G0027080.1 mouse_genomes_project 3 94861052 94863580 + Glmp protein_coding retained_intron MGP_CBAJ_T0061201.1 MGP_CBAJ_G0027080.1 mouse_genomes_project 3 94861064 94862460 + MGP_CBAJ_P0061201 Glmp protein_coding nonsense_mediated_decay MGP_CBAJ_T0061202.1 MGP_CBAJ_G0027080.1 mouse_genomes_project 3 94861074 94864356 + MGP_CBAJ_P0061202 Glmp protein_coding protein_coding MGP_CBAJ_T0061203.1 MGP_CBAJ_G0027080.1 mouse_genomes_project 3 94861074 94864361 + MGP_CBAJ_P0061203 Glmp protein_coding protein_coding MGP_CBAJ_T0061204.1 MGP_CBAJ_G0027080.1 mouse_genomes_project 3 94861074 94864361 + MGP_CBAJ_P0061204 Glmp protein_coding protein_coding MGP_CBAJ_T0061205.1 MGP_CBAJ_G0027080.1 mouse_genomes_project 3 94862036 94864311 + Glmp protein_coding retained_intron MGP_CBAJ_T0061206.1 MGP_CBAJ_G0027080.1 mouse_genomes_project 3 94862170 94864574 + MGP_CBAJ_P0061206 Glmp protein_coding protein_coding MGP_CBAJ_T0007675.1 MGP_CBAJ_G0006268.1 mouse_genomes_project 3 165953432 165957708 + Gm42949 lincRNA lincRNA MGP_CBAJ_T0007405.1 MGP_CBAJ_G0006062.1 mouse_genomes_project 3 36918856 36925864 - Gm11548 lincRNA lincRNA MGP_CBAJ_T0010403.1 MGP_CBAJ_G0008541.1 mouse_genomes_project 3 96908363 96908421 - Mir7669 miRNA miRNA MGP_CBAJ_T0060824.1 MGP_CBAJ_G0026994.1 mouse_genomes_project 3 78281693 78358936 - MGP_CBAJ_P0060824 Bche protein_coding protein_coding MGP_CBAJ_T0060825.1 MGP_CBAJ_G0026994.1 mouse_genomes_project 3 78294296 78358763 - Bche protein_coding retained_intron MGP_CBAJ_T0060826.1 MGP_CBAJ_G0026994.1 mouse_genomes_project 3 78350874 78358788 - MGP_CBAJ_P0060826 Bche protein_coding protein_coding MGP_CBAJ_T0060827.1 MGP_CBAJ_G0026994.1 mouse_genomes_project 3 78353363 78358788 - Bche protein_coding processed_transcript MGP_CBAJ_T0017694.1 MGP_CBAJ_G0015245.1 mouse_genomes_project 3 46527817 46637338 - processed_transcript lincRNA MGP_CBAJ_T0017695.1 MGP_CBAJ_G0015245.1 mouse_genomes_project 3 46528730 46618726 - processed_transcript lincRNA MGP_CBAJ_T0017696.1 MGP_CBAJ_G0015245.1 mouse_genomes_project 3 46587937 46637283 - processed_transcript retained_intron MGP_CBAJ_T0007389.1 MGP_CBAJ_G0006048.1 mouse_genomes_project 3 33763798 33834487 - lincRNA lincRNA MGP_CBAJ_T0001265.1 MGP_CBAJ_G0001192.1 mouse_genomes_project 3 132761295 132763103 - TEC TEC MGP_CBAJ_T0001274.1 MGP_CBAJ_G0001201.1 mouse_genomes_project 3 134453729 134456289 - TEC TEC MGP_CBAJ_T0013773.1 MGP_CBAJ_G0011885.1 mouse_genomes_project 3 21319514 21320208 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097809.1 MGP_CBAJ_G0036082.1 mouse_genomes_project 3 91045006 91045531 - pseudogene pseudogene MGP_CBAJ_T0014047.1 MGP_CBAJ_G0012159.1 mouse_genomes_project 3 116723725 116724470 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061025.1 MGP_CBAJ_G0027041.1 mouse_genomes_project 3 91816704 91830619 - Fam160a1 protein_coding retained_intron MGP_CBAJ_T0061026.1 MGP_CBAJ_G0027041.1 mouse_genomes_project 3 91816706 91987324 - MGP_CBAJ_P0061026 Fam160a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061027.1 MGP_CBAJ_G0027041.1 mouse_genomes_project 3 91816706 91905760 - MGP_CBAJ_P0061027 Fam160a1 protein_coding protein_coding MGP_CBAJ_T0061028.1 MGP_CBAJ_G0027041.1 mouse_genomes_project 3 91816708 91900968 - MGP_CBAJ_P0061028 Fam160a1 protein_coding protein_coding MGP_CBAJ_T0060639.1 MGP_CBAJ_G0026950.1 mouse_genomes_project 3 65654084 65789389 + MGP_CBAJ_P0060639 Arhgef26 protein_coding protein_coding MGP_CBAJ_T0060640.1 MGP_CBAJ_G0026950.1 mouse_genomes_project 3 65654739 65688322 + Arhgef26 protein_coding processed_transcript MGP_CBAJ_T0060641.1 MGP_CBAJ_G0026950.1 mouse_genomes_project 3 65656130 65686712 + Arhgef26 protein_coding retained_intron MGP_CBAJ_T0060642.1 MGP_CBAJ_G0026950.1 mouse_genomes_project 3 65656841 65689582 + Arhgef26 protein_coding processed_transcript MGP_CBAJ_T0060643.1 MGP_CBAJ_G0026950.1 mouse_genomes_project 3 65736864 65787380 + MGP_CBAJ_P0060643 Arhgef26 protein_coding protein_coding MGP_CBAJ_T0060644.1 MGP_CBAJ_G0026950.1 mouse_genomes_project 3 65744372 65747204 + Arhgef26 protein_coding retained_intron MGP_CBAJ_T0001268.1 MGP_CBAJ_G0001195.1 mouse_genomes_project 3 132839985 132841058 - TEC TEC MGP_CBAJ_T0061020.1 MGP_CBAJ_G0027040.1 mouse_genomes_project 3 91728675 91812272 + MGP_CBAJ_P0061020 Gatb protein_coding protein_coding MGP_CBAJ_T0061021.1 MGP_CBAJ_G0027040.1 mouse_genomes_project 3 91728675 91803212 + MGP_CBAJ_P0061021 Gatb protein_coding protein_coding MGP_CBAJ_T0061022.1 MGP_CBAJ_G0027040.1 mouse_genomes_project 3 91728683 91809467 + MGP_CBAJ_P0061022 Gatb protein_coding protein_coding MGP_CBAJ_T0061023.1 MGP_CBAJ_G0027040.1 mouse_genomes_project 3 91728688 91730598 + Gatb protein_coding processed_transcript MGP_CBAJ_T0061024.1 MGP_CBAJ_G0027040.1 mouse_genomes_project 3 91728751 91810791 + Gatb protein_coding processed_transcript MGP_CBAJ_T0007402.1 MGP_CBAJ_G0006059.1 mouse_genomes_project 3 35500965 35522399 - Gm43003 lincRNA lincRNA MGP_CBAJ_T0061938.1 MGP_CBAJ_G0027250.1 mouse_genomes_project 3 102995845 102996786 - Scnm1 protein_coding retained_intron MGP_CBAJ_T0061939.1 MGP_CBAJ_G0027250.1 mouse_genomes_project 3 102995846 102999692 - Scnm1 protein_coding retained_intron MGP_CBAJ_T0061940.1 MGP_CBAJ_G0027250.1 mouse_genomes_project 3 102995848 102996415 - Scnm1 protein_coding retained_intron MGP_CBAJ_T0061941.1 MGP_CBAJ_G0027250.1 mouse_genomes_project 3 102995850 102996588 - Scnm1 protein_coding retained_intron MGP_CBAJ_T0061942.1 MGP_CBAJ_G0027250.1 mouse_genomes_project 3 102995850 102999814 - MGP_CBAJ_P0061942 Scnm1 protein_coding protein_coding MGP_CBAJ_T0061943.1 MGP_CBAJ_G0027250.1 mouse_genomes_project 3 102995852 102997184 - Scnm1 protein_coding processed_transcript MGP_CBAJ_T0061944.1 MGP_CBAJ_G0027250.1 mouse_genomes_project 3 102995855 102999930 - MGP_CBAJ_P0061944 Scnm1 protein_coding protein_coding MGP_CBAJ_T0061945.1 MGP_CBAJ_G0027250.1 mouse_genomes_project 3 102996419 102999858 - Scnm1 protein_coding retained_intron MGP_CBAJ_T0010439.1 MGP_CBAJ_G0008577.1 mouse_genomes_project 3 165602920 165602991 - Mir3963 miRNA miRNA MGP_CBAJ_T0001314.1 MGP_CBAJ_G0001240.1 mouse_genomes_project 3 143307310 143309568 + TEC TEC MGP_CBAJ_T0001257.1 MGP_CBAJ_G0001184.1 mouse_genomes_project 3 129236218 129238121 + TEC TEC MGP_CBAJ_T0013948.1 MGP_CBAJ_G0012060.1 mouse_genomes_project 3 84195363 84196029 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060925.1 MGP_CBAJ_G0027015.1 mouse_genomes_project 3 87694628 87718612 - MGP_CBAJ_P0060925 Tdo2 protein_coding protein_coding MGP_CBAJ_T0060926.1 MGP_CBAJ_G0027015.1 mouse_genomes_project 3 87696262 87701517 - Tdo2 protein_coding processed_transcript MGP_CBAJ_T0060927.1 MGP_CBAJ_G0027015.1 mouse_genomes_project 3 87696329 87718612 - MGP_CBAJ_P0060927 Tdo2 protein_coding protein_coding MGP_CBAJ_T0060928.1 MGP_CBAJ_G0027015.1 mouse_genomes_project 3 87698575 87701469 - Tdo2 protein_coding retained_intron MGP_CBAJ_T0007545.1 MGP_CBAJ_G0006165.1 mouse_genomes_project 3 111106037 111107819 + Gm43242 lincRNA lincRNA MGP_CBAJ_T0004157.1 MGP_CBAJ_G0003657.1 mouse_genomes_project 3 54143825 54152902 + Gm20089 antisense antisense MGP_CBAJ_T0062981.1 MGP_CBAJ_G0027487.1 mouse_genomes_project 3 126957869 126999154 + MGP_CBAJ_P0062981 Dbt protein_coding protein_coding MGP_CBAJ_T0062982.1 MGP_CBAJ_G0027487.1 mouse_genomes_project 3 126957918 126988326 + MGP_CBAJ_P0062982 Dbt protein_coding protein_coding MGP_CBAJ_T0062983.1 MGP_CBAJ_G0027487.1 mouse_genomes_project 3 126957927 126988348 + MGP_CBAJ_P0062983 Dbt protein_coding nonsense_mediated_decay MGP_CBAJ_T0062984.1 MGP_CBAJ_G0027487.1 mouse_genomes_project 3 126967498 126984083 + Dbt protein_coding retained_intron MGP_CBAJ_T0014127.1 MGP_CBAJ_G0012239.1 mouse_genomes_project 3 146614997 146615438 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007656.1 MGP_CBAJ_G0006256.1 mouse_genomes_project 3 160401384 160413131 - Gm10636 lincRNA lincRNA MGP_CBAJ_T0014173.1 MGP_CBAJ_G0012285.1 mouse_genomes_project 3 159826526 159826806 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010374.1 MGP_CBAJ_G0008512.1 mouse_genomes_project 3 25902038 25902165 - Gm25773 miRNA miRNA MGP_CBAJ_T0061211.1 MGP_CBAJ_G0027082.1 mouse_genomes_project 3 94872176 94898164 + MGP_CBAJ_P0061211 Smg5 protein_coding protein_coding MGP_CBAJ_T0061212.1 MGP_CBAJ_G0027082.1 mouse_genomes_project 3 94872227 94888559 + Smg5 protein_coding retained_intron MGP_CBAJ_T0061213.1 MGP_CBAJ_G0027082.1 mouse_genomes_project 3 94872281 94879156 + Smg5 protein_coding retained_intron MGP_CBAJ_T0061214.1 MGP_CBAJ_G0027082.1 mouse_genomes_project 3 94876559 94883435 + Smg5 protein_coding processed_transcript MGP_CBAJ_T0061215.1 MGP_CBAJ_G0027082.1 mouse_genomes_project 3 94878280 94886561 + MGP_CBAJ_P0061215 Smg5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061216.1 MGP_CBAJ_G0027082.1 mouse_genomes_project 3 94888320 94890467 + Smg5 protein_coding retained_intron MGP_CBAJ_T0061217.1 MGP_CBAJ_G0027082.1 mouse_genomes_project 3 94894019 94895463 + Smg5 protein_coding retained_intron MGP_CBAJ_T0061218.1 MGP_CBAJ_G0027082.1 mouse_genomes_project 3 94894172 94897096 + Smg5 protein_coding processed_transcript MGP_CBAJ_T0061219.1 MGP_CBAJ_G0027082.1 mouse_genomes_project 3 94896361 94896917 + Smg5 protein_coding retained_intron MGP_CBAJ_T0001148.1 MGP_CBAJ_G0001077.1 mouse_genomes_project 3 53372119 53372535 - TEC TEC MGP_CBAJ_T0001248.1 MGP_CBAJ_G0001175.1 mouse_genomes_project 3 118091523 118093696 - TEC TEC MGP_CBAJ_T0099190.1 MGP_CBAJ_G0037445.1 mouse_genomes_project 3 95839522 95839626 - Gm22935 snRNA snRNA MGP_CBAJ_T0007520.1 MGP_CBAJ_G0006143.1 mouse_genomes_project 3 100753436 100933565 - lincRNA lincRNA MGP_CBAJ_T0013749.1 MGP_CBAJ_G0011861.1 mouse_genomes_project 3 13152887 13153871 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098367.1 MGP_CBAJ_G0036633.1 mouse_genomes_project 3 113869778 113871316 - Gm42658 sense_intronic sense_intronic MGP_CBAJ_T0061060.1 MGP_CBAJ_G0027050.1 mouse_genomes_project 3 93424193 93522837 - MGP_CBAJ_P0061060 Kirrel protein_coding protein_coding MGP_CBAJ_T0061061.1 MGP_CBAJ_G0027050.1 mouse_genomes_project 3 93424201 93522884 - MGP_CBAJ_P0061061 Kirrel protein_coding protein_coding MGP_CBAJ_T0061062.1 MGP_CBAJ_G0027050.1 mouse_genomes_project 3 93430228 93522687 - MGP_CBAJ_P0061062 Kirrel protein_coding protein_coding MGP_CBAJ_T0098347.1 MGP_CBAJ_G0036613.1 mouse_genomes_project 3 112695386 112696809 - Gm43149 sense_intronic sense_intronic MGP_CBAJ_T0013979.1 MGP_CBAJ_G0012091.1 mouse_genomes_project 3 97987049 97987352 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007354.1 MGP_CBAJ_G0006023.1 mouse_genomes_project 3 7597433 7601710 - Gm38335 lincRNA lincRNA MGP_CBAJ_T0013760.1 MGP_CBAJ_G0011872.1 mouse_genomes_project 3 17335281 17335570 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0060794.1 MGP_CBAJ_G0026984.1 mouse_genomes_project 3 72993373 73004800 - MGP_CBAJ_P0060794 Trim59 protein_coding protein_coding MGP_CBAJ_T0060795.1 MGP_CBAJ_G0026984.1 mouse_genomes_project 3 72994891 73004760 - MGP_CBAJ_P0060795 Trim59 protein_coding protein_coding MGP_CBAJ_T0060796.1 MGP_CBAJ_G0026984.1 mouse_genomes_project 3 73003589 73004760 - Trim59 protein_coding retained_intron MGP_CBAJ_T0060797.1 MGP_CBAJ_G0026984.1 mouse_genomes_project 3 73003815 73004768 - Trim59 protein_coding processed_transcript MGP_CBAJ_T0014098.1 MGP_CBAJ_G0012210.1 mouse_genomes_project 3 134070253 134070713 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098379.1 MGP_CBAJ_G0036645.1 mouse_genomes_project 3 158128092 158131279 - Gm43707 sense_intronic sense_intronic MGP_CBAJ_T0013778.1 MGP_CBAJ_G0011890.1 mouse_genomes_project 3 25631395 25633362 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013989.1 MGP_CBAJ_G0012101.1 mouse_genomes_project 3 100719589 100720411 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099163.1 MGP_CBAJ_G0037418.1 mouse_genomes_project 3 56237419 56237522 + Gm24851 snRNA snRNA MGP_CBAJ_T0013846.1 MGP_CBAJ_G0011958.1 mouse_genomes_project 3 51612027 51612447 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001153.1 MGP_CBAJ_G0001082.1 mouse_genomes_project 3 53705011 53705553 + TEC TEC MGP_CBAJ_T0060783.1 MGP_CBAJ_G0026983.1 mouse_genomes_project 3 72961095 72992722 + MGP_CBAJ_P0060783 Smc4 protein_coding protein_coding MGP_CBAJ_T0060784.1 MGP_CBAJ_G0026983.1 mouse_genomes_project 3 72961327 72976238 + MGP_CBAJ_P0060784 Smc4 protein_coding protein_coding MGP_CBAJ_T0060785.1 MGP_CBAJ_G0026983.1 mouse_genomes_project 3 72961348 72992717 + MGP_CBAJ_P0060785 Smc4 protein_coding protein_coding MGP_CBAJ_T0060786.1 MGP_CBAJ_G0026983.1 mouse_genomes_project 3 72961365 72992722 + MGP_CBAJ_P0060786 Smc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060787.1 MGP_CBAJ_G0026983.1 mouse_genomes_project 3 72961372 72986509 + MGP_CBAJ_P0060787 Smc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060788.1 MGP_CBAJ_G0026983.1 mouse_genomes_project 3 72974619 72976303 + Smc4 protein_coding retained_intron MGP_CBAJ_T0060789.1 MGP_CBAJ_G0026983.1 mouse_genomes_project 3 72974825 72977417 + Smc4 protein_coding processed_transcript MGP_CBAJ_T0060790.1 MGP_CBAJ_G0026983.1 mouse_genomes_project 3 72977025 72979493 + Smc4 protein_coding retained_intron MGP_CBAJ_T0060791.1 MGP_CBAJ_G0026983.1 mouse_genomes_project 3 72980140 72982371 + Smc4 protein_coding retained_intron MGP_CBAJ_T0060792.1 MGP_CBAJ_G0026983.1 mouse_genomes_project 3 72982263 72985952 + MGP_CBAJ_P0060792 Smc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060793.1 MGP_CBAJ_G0026983.1 mouse_genomes_project 3 72988447 72991175 + Smc4 protein_coding retained_intron MGP_CBAJ_T0101092.1 MGP_CBAJ_G0039301.1 mouse_genomes_project 3 12687621 12687901 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0059716.1 MGP_CBAJ_G0026767.1 mouse_genomes_project 3 12779654 12800906 + MGP_CBAJ_P0059716 Car13 protein_coding protein_coding MGP_CBAJ_T0013987.1 MGP_CBAJ_G0012099.1 mouse_genomes_project 3 100594065 100594729 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001290.1 MGP_CBAJ_G0001217.1 mouse_genomes_project 3 138623580 138626068 - TEC TEC MGP_CBAJ_T0060229.1 MGP_CBAJ_G0026868.1 mouse_genomes_project 3 39516563 39651495 + MGP_CBAJ_P0060229 Fat4 protein_coding unknown_likely_coding MGP_CBAJ_T0060230.1 MGP_CBAJ_G0026868.1 mouse_genomes_project 3 39521011 39584055 + Fat4 protein_coding retained_intron MGP_CBAJ_T0062280.1 MGP_CBAJ_G0027324.1 mouse_genomes_project 3 105956743 106187798 - MGP_CBAJ_P0062280 Pde4dip protein_coding protein_coding MGP_CBAJ_T0062281.1 MGP_CBAJ_G0027324.1 mouse_genomes_project 3 105956749 105961943 - Pde4dip protein_coding processed_transcript MGP_CBAJ_T0062282.1 MGP_CBAJ_G0027324.1 mouse_genomes_project 3 105956784 106187798 - MGP_CBAJ_P0062282 Pde4dip protein_coding protein_coding MGP_CBAJ_T0062283.1 MGP_CBAJ_G0027324.1 mouse_genomes_project 3 105961900 105964187 - Pde4dip protein_coding processed_transcript MGP_CBAJ_T0062284.1 MGP_CBAJ_G0027324.1 mouse_genomes_project 3 106012192 106043238 - MGP_CBAJ_P0062284 Pde4dip protein_coding protein_coding MGP_CBAJ_T0062285.1 MGP_CBAJ_G0027324.1 mouse_genomes_project 3 106014155 106043160 - MGP_CBAJ_P0062285 Pde4dip protein_coding nonsense_mediated_decay MGP_CBAJ_T0062286.1 MGP_CBAJ_G0027324.1 mouse_genomes_project 3 106021938 106160830 - MGP_CBAJ_P0062286 Pde4dip protein_coding protein_coding MGP_CBAJ_T0062287.1 MGP_CBAJ_G0027324.1 mouse_genomes_project 3 106070631 106109578 - MGP_CBAJ_P0062287 Pde4dip protein_coding protein_coding MGP_CBAJ_T0062288.1 MGP_CBAJ_G0027324.1 mouse_genomes_project 3 106105947 106160779 - Pde4dip protein_coding retained_intron MGP_CBAJ_T0013996.1 MGP_CBAJ_G0012108.1 mouse_genomes_project 3 102617564 102618393 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004277.1 MGP_CBAJ_G0003735.1 mouse_genomes_project 3 133748348 133759947 + Gm43569 antisense antisense MGP_CBAJ_T0062265.1 MGP_CBAJ_G0027320.1 mouse_genomes_project 3 105814890 105868416 - MGP_CBAJ_P0062265 Chd1l protein_coding protein_coding MGP_CBAJ_T0062266.1 MGP_CBAJ_G0027320.1 mouse_genomes_project 3 105818524 105822990 - Chd1l protein_coding retained_intron MGP_CBAJ_T0062267.1 MGP_CBAJ_G0027320.1 mouse_genomes_project 3 105826912 105868405 - Chd1l protein_coding retained_intron MGP_CBAJ_T0017699.1 MGP_CBAJ_G0015247.1 mouse_genomes_project 3 53677436 53684515 + 5031434O11Rik processed_transcript antisense MGP_CBAJ_T0017700.1 MGP_CBAJ_G0015247.1 mouse_genomes_project 3 53679872 53684503 + 5031434O11Rik processed_transcript antisense MGP_CBAJ_T0017701.1 MGP_CBAJ_G0015247.1 mouse_genomes_project 3 53681044 53684509 + 5031434O11Rik processed_transcript retained_intron MGP_CBAJ_T0062289.1 MGP_CBAJ_G0027325.1 mouse_genomes_project 3 106200238 106222325 + MGP_CBAJ_P0062289 Sec22b protein_coding protein_coding MGP_CBAJ_T0062290.1 MGP_CBAJ_G0027325.1 mouse_genomes_project 3 106200264 106220900 + MGP_CBAJ_P0062290 Sec22b protein_coding nonsense_mediated_decay MGP_CBAJ_T0062291.1 MGP_CBAJ_G0027325.1 mouse_genomes_project 3 106200273 106206713 + MGP_CBAJ_P0062291 Sec22b protein_coding protein_coding MGP_CBAJ_T0062292.1 MGP_CBAJ_G0027325.1 mouse_genomes_project 3 106200275 106214260 + MGP_CBAJ_P0062292 Sec22b protein_coding protein_coding MGP_CBAJ_T0062293.1 MGP_CBAJ_G0027325.1 mouse_genomes_project 3 106206002 106206713 + Sec22b protein_coding processed_transcript MGP_CBAJ_T0014084.1 MGP_CBAJ_G0012196.1 mouse_genomes_project 3 127751209 127751852 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101839.1 MGP_CBAJ_G0039870.1 mouse_genomes_project 3 12915426 12925631 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0061350.1 MGP_CBAJ_G0027103.1 mouse_genomes_project 3 95825580 95831661 - MGP_CBAJ_P0061350 Rusc1 protein_coding protein_coding MGP_CBAJ_T0061351.1 MGP_CBAJ_G0027103.1 mouse_genomes_project 3 95825580 95834906 - MGP_CBAJ_P0061351 Rusc1 protein_coding protein_coding MGP_CBAJ_T0061352.1 MGP_CBAJ_G0027103.1 mouse_genomes_project 3 95825580 95834927 - MGP_CBAJ_P0061352 Rusc1 protein_coding protein_coding MGP_CBAJ_T0061353.1 MGP_CBAJ_G0027103.1 mouse_genomes_project 3 95828736 95831357 - Rusc1 protein_coding retained_intron MGP_CBAJ_T0061354.1 MGP_CBAJ_G0027103.1 mouse_genomes_project 3 95829836 95831591 - MGP_CBAJ_P0061354 Rusc1 protein_coding protein_coding MGP_CBAJ_T0061355.1 MGP_CBAJ_G0027103.1 mouse_genomes_project 3 95830670 95831371 - Rusc1 protein_coding retained_intron MGP_CBAJ_T0061356.1 MGP_CBAJ_G0027103.1 mouse_genomes_project 3 95830854 95831591 - MGP_CBAJ_P0061356 Rusc1 protein_coding protein_coding MGP_CBAJ_T0098337.1 MGP_CBAJ_G0036603.1 mouse_genomes_project 3 110002872 110005061 + Gm42939 sense_intronic sense_intronic MGP_CBAJ_T0098323.1 MGP_CBAJ_G0036589.1 mouse_genomes_project 3 96956845 96958510 + Gm16540 sense_intronic sense_intronic MGP_CBAJ_T0014188.1 MGP_CBAJ_G0012300.1 mouse_genomes_project 3 169161469 169161807 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001089.1 MGP_CBAJ_G0001018.1 mouse_genomes_project 3 28823966 28825322 + TEC TEC MGP_CBAJ_T0001326.1 MGP_CBAJ_G0001252.1 mouse_genomes_project 3 149436741 149438264 + TEC TEC MGP_CBAJ_T0013946.1 MGP_CBAJ_G0012058.1 mouse_genomes_project 3 83426122 83427062 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101848.1 MGP_CBAJ_G0039879.1 mouse_genomes_project 3 67884231 67888444 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0061561.1 MGP_CBAJ_G0027139.1 mouse_genomes_project 3 96891868 96895897 - Hax1 protein_coding retained_intron MGP_CBAJ_T0061562.1 MGP_CBAJ_G0027139.1 mouse_genomes_project 3 96893006 96895600 - MGP_CBAJ_P0061562 Hax1 protein_coding protein_coding MGP_CBAJ_T0061563.1 MGP_CBAJ_G0027139.1 mouse_genomes_project 3 96893006 96895831 - MGP_CBAJ_P0061563 Hax1 protein_coding protein_coding MGP_CBAJ_T0061564.1 MGP_CBAJ_G0027139.1 mouse_genomes_project 3 96893006 96895877 - MGP_CBAJ_P0061564 Hax1 protein_coding protein_coding MGP_CBAJ_T0061565.1 MGP_CBAJ_G0027139.1 mouse_genomes_project 3 96893006 96895908 - MGP_CBAJ_P0061565 Hax1 protein_coding protein_coding MGP_CBAJ_T0061566.1 MGP_CBAJ_G0027139.1 mouse_genomes_project 3 96893104 96895891 - MGP_CBAJ_P0061566 Hax1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061567.1 MGP_CBAJ_G0027139.1 mouse_genomes_project 3 96894730 96895991 - Hax1 protein_coding retained_intron MGP_CBAJ_T0061568.1 MGP_CBAJ_G0027139.1 mouse_genomes_project 3 96894980 96895573 - MGP_CBAJ_P0061568 Hax1 protein_coding protein_coding MGP_CBAJ_T0098036.1 MGP_CBAJ_G0036309.1 mouse_genomes_project 3 95625425 95625544 + n-R5s197 rRNA rRNA MGP_CBAJ_T0001236.1 MGP_CBAJ_G0001163.1 mouse_genomes_project 3 105634092 105635055 + TEC TEC MGP_CBAJ_T0001097.1 MGP_CBAJ_G0001026.1 mouse_genomes_project 3 30732165 30732475 - TEC TEC MGP_CBAJ_T0060802.1 MGP_CBAJ_G0026987.1 mouse_genomes_project 3 73322129 73593345 + MGP_CBAJ_P0060802 Ppm1l protein_coding protein_coding MGP_CBAJ_T0060803.1 MGP_CBAJ_G0026987.1 mouse_genomes_project 3 73525917 73526672 + Ppm1l protein_coding retained_intron MGP_CBAJ_T0060804.1 MGP_CBAJ_G0026987.1 mouse_genomes_project 3 73575074 73585457 + Ppm1l protein_coding processed_transcript MGP_CBAJ_T0060805.1 MGP_CBAJ_G0026987.1 mouse_genomes_project 3 73581543 73585638 + Ppm1l protein_coding retained_intron MGP_CBAJ_T0060722.1 MGP_CBAJ_G0026968.1 mouse_genomes_project 3 69930119 69936015 + MGP_CBAJ_P0060722 Ptx3 protein_coding protein_coding MGP_CBAJ_T0060723.1 MGP_CBAJ_G0026968.1 mouse_genomes_project 3 69930454 69931640 + Ptx3 protein_coding retained_intron MGP_CBAJ_T0100428.1 MGP_CBAJ_G0038683.1 mouse_genomes_project 3 4069872 4069985 + Gm22074 snoRNA snoRNA MGP_CBAJ_T0100486.1 MGP_CBAJ_G0038741.1 mouse_genomes_project 3 130474930 130475061 - Gm23432 snoRNA snoRNA MGP_CBAJ_T0007414.1 MGP_CBAJ_G0006070.1 mouse_genomes_project 3 38937835 38942080 + Gm42920 lincRNA lincRNA MGP_CBAJ_T0059951.1 MGP_CBAJ_G0026820.1 mouse_genomes_project 3 30619864 30646760 + Gpr160 protein_coding retained_intron MGP_CBAJ_T0059952.1 MGP_CBAJ_G0026820.1 mouse_genomes_project 3 30619864 30669570 + MGP_CBAJ_P0059952 Gpr160 protein_coding protein_coding MGP_CBAJ_T0059953.1 MGP_CBAJ_G0026820.1 mouse_genomes_project 3 30619864 30669570 + MGP_CBAJ_P0059953 Gpr160 protein_coding protein_coding MGP_CBAJ_T0059954.1 MGP_CBAJ_G0026820.1 mouse_genomes_project 3 30619864 30669572 + MGP_CBAJ_P0059954 Gpr160 protein_coding protein_coding MGP_CBAJ_T0059955.1 MGP_CBAJ_G0026820.1 mouse_genomes_project 3 30619903 30669570 + MGP_CBAJ_P0059955 Gpr160 protein_coding protein_coding MGP_CBAJ_T0059956.1 MGP_CBAJ_G0026820.1 mouse_genomes_project 3 30619907 30668172 + MGP_CBAJ_P0059956 Gpr160 protein_coding protein_coding MGP_CBAJ_T0059957.1 MGP_CBAJ_G0026820.1 mouse_genomes_project 3 30619929 30669570 + MGP_CBAJ_P0059957 Gpr160 protein_coding protein_coding MGP_CBAJ_T0059958.1 MGP_CBAJ_G0026820.1 mouse_genomes_project 3 30620057 30668201 + MGP_CBAJ_P0059958 Gpr160 protein_coding protein_coding MGP_CBAJ_T0099220.1 MGP_CBAJ_G0037475.1 mouse_genomes_project 3 144789680 144789786 - Gm25307 snRNA snRNA MGP_CBAJ_T0100449.1 MGP_CBAJ_G0038704.1 mouse_genomes_project 3 59136173 59136304 - Gm25727 snoRNA snoRNA MGP_CBAJ_T0060801.1 MGP_CBAJ_G0026986.1 mouse_genomes_project 3 73211195 73212395 + MGP_CBAJ_P0060801 Arl14 protein_coding protein_coding MGP_CBAJ_T0013743.1 MGP_CBAJ_G0011855.1 mouse_genomes_project 3 12487265 12487744 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007485.1 MGP_CBAJ_G0006121.1 mouse_genomes_project 3 86578121 86589100 + Gm42468 lincRNA lincRNA MGP_CBAJ_T0007467.1 MGP_CBAJ_G0006107.1 mouse_genomes_project 3 72698690 72701934 + lincRNA lincRNA MGP_CBAJ_T0063031.1 MGP_CBAJ_G0027496.1 mouse_genomes_project 3 127427521 127485712 - MGP_CBAJ_P0063031 Palmd protein_coding protein_coding MGP_CBAJ_T0063032.1 MGP_CBAJ_G0027496.1 mouse_genomes_project 3 127430886 127485583 - MGP_CBAJ_P0063032 Palmd protein_coding protein_coding MGP_CBAJ_T0063033.1 MGP_CBAJ_G0027496.1 mouse_genomes_project 3 127436283 127485711 - MGP_CBAJ_P0063033 Palmd protein_coding protein_coding MGP_CBAJ_T0063034.1 MGP_CBAJ_G0027496.1 mouse_genomes_project 3 127481769 127485468 - Palmd protein_coding retained_intron MGP_CBAJ_T0013744.1 MGP_CBAJ_G0011856.1 mouse_genomes_project 3 12539715 12546233 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014153.1 MGP_CBAJ_G0012265.1 mouse_genomes_project 3 152123936 152124374 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007445.1 MGP_CBAJ_G0006090.1 mouse_genomes_project 3 55058057 55066838 - Gm30292 lincRNA lincRNA MGP_CBAJ_T0013716.1 MGP_CBAJ_G0011828.1 mouse_genomes_project 3 4628640 4629669 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014108.1 MGP_CBAJ_G0012220.1 mouse_genomes_project 3 137805594 137806840 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001307.1 MGP_CBAJ_G0001233.1 mouse_genomes_project 3 142646270 142652412 + TEC TEC MGP_CBAJ_T0001267.1 MGP_CBAJ_G0001194.1 mouse_genomes_project 3 132814892 132817582 - TEC TEC MGP_CBAJ_T0001111.1 MGP_CBAJ_G0001040.1 mouse_genomes_project 3 36297414 36300057 - TEC TEC MGP_CBAJ_T0060904.1 MGP_CBAJ_G0027011.1 mouse_genomes_project 3 86265255 86399223 - MGP_CBAJ_P0060904 Gria2 protein_coding protein_coding MGP_CBAJ_T0060905.1 MGP_CBAJ_G0027011.1 mouse_genomes_project 3 86273017 86399223 - MGP_CBAJ_P0060905 Gria2 protein_coding protein_coding MGP_CBAJ_T0060906.1 MGP_CBAJ_G0027011.1 mouse_genomes_project 3 86273262 86398967 - MGP_CBAJ_P0060906 Gria2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060907.1 MGP_CBAJ_G0027011.1 mouse_genomes_project 3 86278144 86399179 - Gria2 protein_coding retained_intron MGP_CBAJ_T0060908.1 MGP_CBAJ_G0027011.1 mouse_genomes_project 3 86291258 86399038 - Gria2 protein_coding retained_intron MGP_CBAJ_T0060909.1 MGP_CBAJ_G0027011.1 mouse_genomes_project 3 86292951 86399112 - Gria2 protein_coding retained_intron MGP_CBAJ_T0060910.1 MGP_CBAJ_G0027011.1 mouse_genomes_project 3 86294191 86399168 - Gria2 protein_coding retained_intron MGP_CBAJ_T0060911.1 MGP_CBAJ_G0027011.1 mouse_genomes_project 3 86396420 86399081 - Gria2 protein_coding retained_intron MGP_CBAJ_T0013810.1 MGP_CBAJ_G0011922.1 mouse_genomes_project 3 38058434 38058755 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013838.1 MGP_CBAJ_G0011950.1 mouse_genomes_project 3 48613072 48614075 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0063604.1 MGP_CBAJ_G0027602.1 mouse_genomes_project 3 151043768 151065456 - MGP_CBAJ_P0063604 4930579F01Rik protein_coding protein_coding MGP_CBAJ_T0063605.1 MGP_CBAJ_G0027602.1 mouse_genomes_project 3 151043825 151065496 - MGP_CBAJ_P0063605 4930579F01Rik protein_coding protein_coding MGP_CBAJ_T0063606.1 MGP_CBAJ_G0027602.1 mouse_genomes_project 3 151058682 151072538 - 4930579F01Rik protein_coding processed_transcript MGP_CBAJ_T0014063.1 MGP_CBAJ_G0012175.1 mouse_genomes_project 3 121197026 121198554 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007512.1 MGP_CBAJ_G0006137.1 mouse_genomes_project 3 95158842 95161434 - lincRNA lincRNA MGP_CBAJ_T0001246.1 MGP_CBAJ_G0001173.1 mouse_genomes_project 3 117338369 117340252 + TEC TEC MGP_CBAJ_T0014020.1 MGP_CBAJ_G0012132.1 mouse_genomes_project 3 108548036 108548204 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014032.1 MGP_CBAJ_G0012144.1 mouse_genomes_project 3 111431768 111431895 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004203.1 MGP_CBAJ_G0003691.1 mouse_genomes_project 3 97230997 97232630 - 4930537H20Rik antisense antisense MGP_CBAJ_T0001173.1 MGP_CBAJ_G0001100.1 mouse_genomes_project 3 55401764 55402220 + TEC TEC MGP_CBAJ_T0062629.1 MGP_CBAJ_G0027403.1 mouse_genomes_project 3 115115215 115131549 + MGP_CBAJ_P0062629 Ovgp1 protein_coding protein_coding MGP_CBAJ_T0062630.1 MGP_CBAJ_G0027403.1 mouse_genomes_project 3 115115587 115130178 + MGP_CBAJ_P0062630 Ovgp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062631.1 MGP_CBAJ_G0027403.1 mouse_genomes_project 3 115118790 115124263 + Ovgp1 protein_coding retained_intron MGP_CBAJ_T0062632.1 MGP_CBAJ_G0027403.1 mouse_genomes_project 3 115124238 115128876 + Ovgp1 protein_coding processed_transcript MGP_CBAJ_T0098348.1 MGP_CBAJ_G0036614.1 mouse_genomes_project 3 112711629 112712695 - Gm43387 sense_intronic sense_intronic MGP_CBAJ_T0001096.1 MGP_CBAJ_G0001025.1 mouse_genomes_project 3 30321053 30321943 - TEC TEC MGP_CBAJ_T0100504.1 MGP_CBAJ_G0038759.1 mouse_genomes_project 3 168902403 168902483 - Snord45c snoRNA snoRNA MGP_CBAJ_T0013782.1 MGP_CBAJ_G0011894.1 mouse_genomes_project 3 26669132 26669401 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014035.1 MGP_CBAJ_G0012147.1 mouse_genomes_project 3 111992751 111993506 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0063441.1 MGP_CBAJ_G0027571.1 mouse_genomes_project 3 145272692 145403312 - MGP_CBAJ_P0063441 Gstcd protein_coding protein_coding MGP_CBAJ_T0063442.1 MGP_CBAJ_G0027571.1 mouse_genomes_project 3 145274938 145403520 - MGP_CBAJ_P0063442 Gstcd protein_coding protein_coding MGP_CBAJ_T0063443.1 MGP_CBAJ_G0027571.1 mouse_genomes_project 3 145294427 145303956 - Gstcd protein_coding retained_intron MGP_CBAJ_T0063444.1 MGP_CBAJ_G0027571.1 mouse_genomes_project 3 145297109 145403234 - Gstcd protein_coding processed_transcript MGP_CBAJ_T0063445.1 MGP_CBAJ_G0027571.1 mouse_genomes_project 3 145390819 145403265 - Gstcd protein_coding retained_intron MGP_CBAJ_T0063446.1 MGP_CBAJ_G0027571.1 mouse_genomes_project 3 145391015 145392756 - Gstcd protein_coding retained_intron MGP_CBAJ_T0013933.1 MGP_CBAJ_G0012045.1 mouse_genomes_project 3 78976248 78976585 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062364.1 MGP_CBAJ_G0027348.1 mouse_genomes_project 3 109530529 109572841 - MGP_CBAJ_P0062364 Cd101 protein_coding protein_coding MGP_CBAJ_T0062365.1 MGP_CBAJ_G0027348.1 mouse_genomes_project 3 109530532 109561984 - MGP_CBAJ_P0062365 Cd101 protein_coding protein_coding MGP_CBAJ_T0007681.1 MGP_CBAJ_G0006273.1 mouse_genomes_project 3 171197255 171236773 + 9330178D15Rik lincRNA lincRNA MGP_CBAJ_T0098354.1 MGP_CBAJ_G0036620.1 mouse_genomes_project 3 113066776 113070865 - sense_intronic sense_intronic MGP_CBAJ_T0061761.1 MGP_CBAJ_G0027197.1 mouse_genomes_project 3 99992810 99994513 - MGP_CBAJ_P0061761 Lce1a2 protein_coding protein_coding MGP_CBAJ_T0001338.1 MGP_CBAJ_G0001264.1 mouse_genomes_project 3 166557821 166561269 + TEC TEC MGP_CBAJ_T0060679.1 MGP_CBAJ_G0026958.1 mouse_genomes_project 3 67586091 67620124 + MGP_CBAJ_P0060679 Vmn2r1 protein_coding protein_coding MGP_CBAJ_T0001196.1 MGP_CBAJ_G0001123.1 mouse_genomes_project 3 69323846 69326349 + TEC TEC MGP_CBAJ_T0059691.1 MGP_CBAJ_G0026761.1 mouse_genomes_project 3 8070621 8092720 - MGP_CBAJ_P0059691 Snx16 protein_coding protein_coding MGP_CBAJ_T0059692.1 MGP_CBAJ_G0026761.1 mouse_genomes_project 3 8070950 8092705 - MGP_CBAJ_P0059692 Snx16 protein_coding protein_coding MGP_CBAJ_T0059693.1 MGP_CBAJ_G0026761.1 mouse_genomes_project 3 8071741 8092718 - MGP_CBAJ_P0059693 Snx16 protein_coding protein_coding MGP_CBAJ_T0014065.1 MGP_CBAJ_G0012177.1 mouse_genomes_project 3 122143064 122143364 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017759.1 MGP_CBAJ_G0015269.1 mouse_genomes_project 3 148434942 148447771 - processed_transcript macro_lncRNA MGP_CBAJ_T0017760.1 MGP_CBAJ_G0015269.1 mouse_genomes_project 3 148435045 148447771 - processed_transcript antisense MGP_CBAJ_T0014007.1 MGP_CBAJ_G0012119.1 mouse_genomes_project 3 104510578 104514133 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001177.1 MGP_CBAJ_G0001104.1 mouse_genomes_project 3 57900647 57902778 + TEC TEC MGP_CBAJ_T0001359.1 MGP_CBAJ_G0001285.1 mouse_genomes_project 3 173393379 173399236 + TEC TEC MGP_CBAJ_T0060607.1 MGP_CBAJ_G0026943.1 mouse_genomes_project 3 63125854 63143828 + MGP_CBAJ_P0060607 Aadacl2 protein_coding protein_coding MGP_CBAJ_T0060081.1 MGP_CBAJ_G0026841.1 mouse_genomes_project 3 34153389 34178636 - MGP_CBAJ_P0060081 Dnajc19 protein_coding protein_coding MGP_CBAJ_T0060082.1 MGP_CBAJ_G0026841.1 mouse_genomes_project 3 34174617 34178645 - MGP_CBAJ_P0060082 Dnajc19 protein_coding protein_coding MGP_CBAJ_T0060083.1 MGP_CBAJ_G0026841.1 mouse_genomes_project 3 34174662 34178634 - MGP_CBAJ_P0060083 Dnajc19 protein_coding protein_coding MGP_CBAJ_T0060084.1 MGP_CBAJ_G0026841.1 mouse_genomes_project 3 34174692 34177504 - Dnajc19 protein_coding retained_intron MGP_CBAJ_T0060085.1 MGP_CBAJ_G0026841.1 mouse_genomes_project 3 34174772 34178586 - MGP_CBAJ_P0060085 Dnajc19 protein_coding protein_coding MGP_CBAJ_T0001093.1 MGP_CBAJ_G0001022.1 mouse_genomes_project 3 29977685 29979749 - TEC TEC MGP_CBAJ_T0004322.1 MGP_CBAJ_G0003768.1 mouse_genomes_project 3 168814367 168833371 - Asb17os antisense antisense MGP_CBAJ_T0004323.1 MGP_CBAJ_G0003768.1 mouse_genomes_project 3 168831300 168833394 - Asb17os antisense antisense MGP_CBAJ_T0007611.1 MGP_CBAJ_G0006218.1 mouse_genomes_project 3 146594993 146627471 + Gm43192 lincRNA lincRNA MGP_CBAJ_T0010386.1 MGP_CBAJ_G0008524.1 mouse_genomes_project 3 39168532 39168638 - Gm24462 miRNA miRNA MGP_CBAJ_T0007599.1 MGP_CBAJ_G0006207.1 mouse_genomes_project 3 142882380 142887064 + lincRNA lincRNA MGP_CBAJ_T0007600.1 MGP_CBAJ_G0006207.1 mouse_genomes_project 3 142886201 142888123 + lincRNA lincRNA MGP_CBAJ_T0060818.1 MGP_CBAJ_G0026992.1 mouse_genomes_project 3 77442491 77539641 - MGP_CBAJ_P0060818 Sis protein_coding protein_coding MGP_CBAJ_T0060819.1 MGP_CBAJ_G0026992.1 mouse_genomes_project 3 77442494 77535609 - MGP_CBAJ_P0060819 Sis protein_coding protein_coding MGP_CBAJ_T0060820.1 MGP_CBAJ_G0026992.1 mouse_genomes_project 3 77513587 77514737 - Sis protein_coding retained_intron MGP_CBAJ_T0060821.1 MGP_CBAJ_G0026992.1 mouse_genomes_project 3 77533755 77539638 - Sis protein_coding retained_intron MGP_CBAJ_T0007447.1 MGP_CBAJ_G0006092.1 mouse_genomes_project 3 56112785 56123946 + lincRNA lincRNA MGP_CBAJ_T0060185.1 MGP_CBAJ_G0026859.1 mouse_genomes_project 3 37688963 37700938 - MGP_CBAJ_P0060185 Il21 protein_coding protein_coding MGP_CBAJ_T0060186.1 MGP_CBAJ_G0026859.1 mouse_genomes_project 3 37693729 37700885 - MGP_CBAJ_P0060186 Il21 protein_coding protein_coding MGP_CBAJ_T0060187.1 MGP_CBAJ_G0026859.1 mouse_genomes_project 3 37698614 37700956 - Il21 protein_coding retained_intron MGP_CBAJ_T0001303.1 MGP_CBAJ_G0001229.1 mouse_genomes_project 3 141173923 141176514 - TEC TEC MGP_CBAJ_T0060954.1 MGP_CBAJ_G0027023.1 mouse_genomes_project 3 88855870 88862982 + MGP_CBAJ_P0060954 Fgg protein_coding protein_coding MGP_CBAJ_T0060955.1 MGP_CBAJ_G0027023.1 mouse_genomes_project 3 88856007 88862729 + MGP_CBAJ_P0060955 Fgg protein_coding protein_coding MGP_CBAJ_T0062124.1 MGP_CBAJ_G0027282.1 mouse_genomes_project 3 103950067 103972481 + MGP_CBAJ_P0062124 Anp32e protein_coding protein_coding MGP_CBAJ_T0062125.1 MGP_CBAJ_G0027282.1 mouse_genomes_project 3 103950072 103972551 + MGP_CBAJ_P0062125 Anp32e protein_coding protein_coding MGP_CBAJ_T0062126.1 MGP_CBAJ_G0027282.1 mouse_genomes_project 3 103950114 103972358 + MGP_CBAJ_P0062126 Anp32e protein_coding protein_coding MGP_CBAJ_T0062127.1 MGP_CBAJ_G0027282.1 mouse_genomes_project 3 103950175 103974185 + MGP_CBAJ_P0062127 Anp32e protein_coding protein_coding MGP_CBAJ_T0062128.1 MGP_CBAJ_G0027282.1 mouse_genomes_project 3 103950330 103972463 + MGP_CBAJ_P0062128 Anp32e protein_coding nonsense_mediated_decay MGP_CBAJ_T0062129.1 MGP_CBAJ_G0027282.1 mouse_genomes_project 3 103950371 103972234 + MGP_CBAJ_P0062129 Anp32e protein_coding protein_coding MGP_CBAJ_T0062130.1 MGP_CBAJ_G0027282.1 mouse_genomes_project 3 103950386 103974307 + MGP_CBAJ_P0062130 Anp32e protein_coding protein_coding MGP_CBAJ_T0062131.1 MGP_CBAJ_G0027282.1 mouse_genomes_project 3 103951325 103964114 + MGP_CBAJ_P0062131 Anp32e protein_coding protein_coding MGP_CBAJ_T0062132.1 MGP_CBAJ_G0027282.1 mouse_genomes_project 3 103971121 103972439 + Anp32e protein_coding retained_intron MGP_CBAJ_T0014172.1 MGP_CBAJ_G0012284.1 mouse_genomes_project 3 159670430 159670870 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004179.1 MGP_CBAJ_G0003674.1 mouse_genomes_project 3 69632382 69636661 + Gm37305 antisense antisense MGP_CBAJ_T0060235.1 MGP_CBAJ_G0026871.1 mouse_genomes_project 3 41468116 41480688 + MGP_CBAJ_P0060235 Hspa4l protein_coding protein_coding MGP_CBAJ_T0060236.1 MGP_CBAJ_G0026871.1 mouse_genomes_project 3 41469004 41507007 + MGP_CBAJ_P0060236 Hspa4l protein_coding protein_coding MGP_CBAJ_T0060237.1 MGP_CBAJ_G0026871.1 mouse_genomes_project 3 41469052 41521332 + MGP_CBAJ_P0060237 Hspa4l protein_coding protein_coding MGP_CBAJ_T0060238.1 MGP_CBAJ_G0026871.1 mouse_genomes_project 3 41469106 41484432 + MGP_CBAJ_P0060238 Hspa4l protein_coding protein_coding MGP_CBAJ_T0060239.1 MGP_CBAJ_G0026871.1 mouse_genomes_project 3 41469205 41482215 + Hspa4l protein_coding retained_intron MGP_CBAJ_T0060240.1 MGP_CBAJ_G0026871.1 mouse_genomes_project 3 41469490 41515009 + MGP_CBAJ_P0060240 Hspa4l protein_coding protein_coding MGP_CBAJ_T0060241.1 MGP_CBAJ_G0026871.1 mouse_genomes_project 3 41495988 41507249 + Hspa4l protein_coding retained_intron MGP_CBAJ_T0060242.1 MGP_CBAJ_G0026871.1 mouse_genomes_project 3 41509432 41512242 + Hspa4l protein_coding retained_intron MGP_CBAJ_T0001271.1 MGP_CBAJ_G0001198.1 mouse_genomes_project 3 134231803 134235867 + TEC TEC MGP_CBAJ_T0004304.1 MGP_CBAJ_G0003755.1 mouse_genomes_project 3 151087594 151116596 - 0610031O16Rik antisense antisense MGP_CBAJ_T0004305.1 MGP_CBAJ_G0003755.1 mouse_genomes_project 3 151094685 151116596 - 0610031O16Rik antisense antisense MGP_CBAJ_T0004306.1 MGP_CBAJ_G0003755.1 mouse_genomes_project 3 151103444 151116612 - 0610031O16Rik antisense antisense MGP_CBAJ_T0004307.1 MGP_CBAJ_G0003755.1 mouse_genomes_project 3 151105951 151117338 - 0610031O16Rik antisense antisense MGP_CBAJ_T0001361.1 MGP_CBAJ_G0001287.1 mouse_genomes_project 3 173605767 173607127 + TEC TEC MGP_CBAJ_T0004233.1 MGP_CBAJ_G0003711.1 mouse_genomes_project 3 110028480 110029519 - Gm42538 antisense antisense MGP_CBAJ_T0004234.1 MGP_CBAJ_G0003711.1 mouse_genomes_project 3 110029139 110030810 - Gm42538 antisense antisense MGP_CBAJ_T0060604.1 MGP_CBAJ_G0026940.1 mouse_genomes_project 3 62766342 62797877 + MGP_CBAJ_P0060604 Gm5538 protein_coding protein_coding MGP_CBAJ_T0063771.1 MGP_CBAJ_G0027635.1 mouse_genomes_project 3 159144914 159437659 + MGP_CBAJ_P0063771 Col24a1 protein_coding protein_coding MGP_CBAJ_T0063772.1 MGP_CBAJ_G0027635.1 mouse_genomes_project 3 159144969 159169628 + MGP_CBAJ_P0063772 Col24a1 protein_coding protein_coding MGP_CBAJ_T0063773.1 MGP_CBAJ_G0027635.1 mouse_genomes_project 3 159399233 159424299 + Col24a1 protein_coding processed_transcript MGP_CBAJ_T0063774.1 MGP_CBAJ_G0027635.1 mouse_genomes_project 3 159430637 159437654 + Col24a1 protein_coding retained_intron MGP_CBAJ_T0063837.1 MGP_CBAJ_G0027651.1 mouse_genomes_project 3 160627276 160691542 + MGP_CBAJ_P0063837 Uox protein_coding protein_coding MGP_CBAJ_T0063840.1 MGP_CBAJ_G0027651.1 mouse_genomes_project 3 160658996 160697827 + MGP_CBAJ_P0063840 Uox protein_coding protein_coding MGP_CBAJ_T0063841.1 MGP_CBAJ_G0027651.1 mouse_genomes_project 3 160659067 160674249 + MGP_CBAJ_P0063841 Uox protein_coding protein_coding MGP_CBAJ_T0063842.1 MGP_CBAJ_G0027651.1 mouse_genomes_project 3 160659084 160696167 + MGP_CBAJ_P0063842 Uox protein_coding protein_coding MGP_CBAJ_T0063843.1 MGP_CBAJ_G0027651.1 mouse_genomes_project 3 160659085 160674367 + Uox protein_coding retained_intron MGP_CBAJ_T0063844.1 MGP_CBAJ_G0027651.1 mouse_genomes_project 3 160671908 160674272 + Uox protein_coding retained_intron MGP_CBAJ_T0013958.1 MGP_CBAJ_G0012070.1 mouse_genomes_project 3 90559371 90561997 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098030.1 MGP_CBAJ_G0036303.1 mouse_genomes_project 3 7371591 7371700 - Gm24786 rRNA rRNA MGP_CBAJ_T0062489.1 MGP_CBAJ_G0027372.1 mouse_genomes_project 3 112652039 112664067 - Olfml3 protein_coding processed_transcript MGP_CBAJ_T0062490.1 MGP_CBAJ_G0027372.1 mouse_genomes_project 3 112661504 112667834 - MGP_CBAJ_P0062490 Olfml3 protein_coding protein_coding MGP_CBAJ_T0062491.1 MGP_CBAJ_G0027372.1 mouse_genomes_project 3 112661520 112662394 - MGP_CBAJ_P0062491 Olfml3 protein_coding protein_coding MGP_CBAJ_T0062492.1 MGP_CBAJ_G0027372.1 mouse_genomes_project 3 112663537 112667801 - Olfml3 protein_coding retained_intron MGP_CBAJ_T0062359.1 MGP_CBAJ_G0027347.1 mouse_genomes_project 3 109466302 109504375 - MGP_CBAJ_P0062359 Ttf2 protein_coding protein_coding MGP_CBAJ_T0062360.1 MGP_CBAJ_G0027347.1 mouse_genomes_project 3 109469290 109475775 - Ttf2 protein_coding retained_intron MGP_CBAJ_T0062361.1 MGP_CBAJ_G0027347.1 mouse_genomes_project 3 109475767 109504375 - Ttf2 protein_coding retained_intron MGP_CBAJ_T0062362.1 MGP_CBAJ_G0027347.1 mouse_genomes_project 3 109476880 109484779 - MGP_CBAJ_P0062362 Ttf2 protein_coding protein_coding MGP_CBAJ_T0062363.1 MGP_CBAJ_G0027347.1 mouse_genomes_project 3 109490933 109492169 - Ttf2 protein_coding retained_intron MGP_CBAJ_T0001181.1 MGP_CBAJ_G0001108.1 mouse_genomes_project 3 58647590 58649550 - TEC TEC MGP_CBAJ_T0100502.1 MGP_CBAJ_G0038757.1 mouse_genomes_project 3 168900844 168900915 - Snord45b snoRNA snoRNA MGP_CBAJ_T0013706.1 MGP_CBAJ_G0011818.1 mouse_genomes_project 3 1234627 1234844 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0059656.1 MGP_CBAJ_G0026749.1 mouse_genomes_project 3 7208897 7375642 - MGP_CBAJ_P0059656 Pag1 protein_coding protein_coding MGP_CBAJ_T0059657.1 MGP_CBAJ_G0026749.1 mouse_genomes_project 3 7213298 7375593 - MGP_CBAJ_P0059657 Pag1 protein_coding protein_coding MGP_CBAJ_T0059658.1 MGP_CBAJ_G0026749.1 mouse_genomes_project 3 7214167 7226406 - Pag1 protein_coding retained_intron MGP_CBAJ_T0059659.1 MGP_CBAJ_G0026749.1 mouse_genomes_project 3 7281406 7375326 - Pag1 protein_coding retained_intron MGP_CBAJ_T0059660.1 MGP_CBAJ_G0026749.1 mouse_genomes_project 3 7369401 7375593 - Pag1 protein_coding processed_transcript MGP_CBAJ_T0001280.1 MGP_CBAJ_G0001207.1 mouse_genomes_project 3 138170754 138175259 + TEC TEC MGP_CBAJ_T0010429.1 MGP_CBAJ_G0008567.1 mouse_genomes_project 3 141703958 141704117 - Gm24515 miRNA miRNA MGP_CBAJ_T0013975.1 MGP_CBAJ_G0012087.1 mouse_genomes_project 3 97596759 97596912 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014164.1 MGP_CBAJ_G0012276.1 mouse_genomes_project 3 155997809 155998441 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013866.1 MGP_CBAJ_G0011978.1 mouse_genomes_project 3 59906979 59908315 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007349.1 MGP_CBAJ_G0006020.1 mouse_genomes_project 3 6484958 6497919 + 4930539M17Rik lincRNA lincRNA MGP_CBAJ_T0014096.1 MGP_CBAJ_G0012208.1 mouse_genomes_project 3 133324332 133325886 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014071.1 MGP_CBAJ_G0012183.1 mouse_genomes_project 3 123757492 123758099 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007415.1 MGP_CBAJ_G0006071.1 mouse_genomes_project 3 39015657 39034346 - Gm43536 lincRNA lincRNA MGP_CBAJ_T0007416.1 MGP_CBAJ_G0006071.1 mouse_genomes_project 3 39016461 39034348 - Gm43536 lincRNA lincRNA MGP_CBAJ_T0007417.1 MGP_CBAJ_G0006071.1 mouse_genomes_project 3 39018116 39034588 - Gm43536 lincRNA lincRNA MGP_CBAJ_T0060038.1 MGP_CBAJ_G0026836.1 mouse_genomes_project 3 32818870 32958478 + MGP_CBAJ_P0060038 Usp13 protein_coding protein_coding MGP_CBAJ_T0060039.1 MGP_CBAJ_G0026836.1 mouse_genomes_project 3 32818895 32953328 + MGP_CBAJ_P0060039 Usp13 protein_coding protein_coding MGP_CBAJ_T0060040.1 MGP_CBAJ_G0026836.1 mouse_genomes_project 3 32819035 32935050 + MGP_CBAJ_P0060040 Usp13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060041.1 MGP_CBAJ_G0026836.1 mouse_genomes_project 3 32935019 32953336 + MGP_CBAJ_P0060041 Usp13 protein_coding protein_coding MGP_CBAJ_T0060114.1 MGP_CBAJ_G0026846.1 mouse_genomes_project 3 36342178 36392174 - MGP_CBAJ_P0060114 Ccdc144b protein_coding protein_coding MGP_CBAJ_T0060115.1 MGP_CBAJ_G0026846.1 mouse_genomes_project 3 36345551 36392159 - MGP_CBAJ_P0060115 Ccdc144b protein_coding protein_coding MGP_CBAJ_T0060116.1 MGP_CBAJ_G0026846.1 mouse_genomes_project 3 36350097 36392159 - MGP_CBAJ_P0060116 Ccdc144b protein_coding nonsense_mediated_decay MGP_CBAJ_T0059772.1 MGP_CBAJ_G0026788.1 mouse_genomes_project 3 18646813 18684135 + MGP_CBAJ_P0059772 Cp protein_coding protein_coding MGP_CBAJ_T0059773.1 MGP_CBAJ_G0026788.1 mouse_genomes_project 3 18646813 18702646 + MGP_CBAJ_P0059773 Cp protein_coding protein_coding MGP_CBAJ_T0059774.1 MGP_CBAJ_G0026788.1 mouse_genomes_project 3 18646820 18659710 + Cp protein_coding retained_intron MGP_CBAJ_T0059775.1 MGP_CBAJ_G0026788.1 mouse_genomes_project 3 18646828 18704207 + MGP_CBAJ_P0059775 Cp protein_coding protein_coding MGP_CBAJ_T0059776.1 MGP_CBAJ_G0026788.1 mouse_genomes_project 3 18646870 18702646 + MGP_CBAJ_P0059776 Cp protein_coding protein_coding MGP_CBAJ_T0059777.1 MGP_CBAJ_G0026788.1 mouse_genomes_project 3 18646978 18659378 + Cp protein_coding retained_intron MGP_CBAJ_T0059778.1 MGP_CBAJ_G0026788.1 mouse_genomes_project 3 18647043 18683522 + MGP_CBAJ_P0059778 Cp protein_coding protein_coding MGP_CBAJ_T0059779.1 MGP_CBAJ_G0026788.1 mouse_genomes_project 3 18660214 18679490 + Cp protein_coding retained_intron MGP_CBAJ_T0059780.1 MGP_CBAJ_G0026788.1 mouse_genomes_project 3 18661257 18665489 + Cp protein_coding retained_intron MGP_CBAJ_T0059781.1 MGP_CBAJ_G0026788.1 mouse_genomes_project 3 18665195 18671166 + Cp protein_coding retained_intron MGP_CBAJ_T0059782.1 MGP_CBAJ_G0026788.1 mouse_genomes_project 3 18671052 18677821 + MGP_CBAJ_P0059782 Cp protein_coding nonsense_mediated_decay MGP_CBAJ_T0059783.1 MGP_CBAJ_G0026788.1 mouse_genomes_project 3 18671852 18673912 + Cp protein_coding retained_intron MGP_CBAJ_T0059784.1 MGP_CBAJ_G0026788.1 mouse_genomes_project 3 18672427 18676328 + MGP_CBAJ_P0059784 Cp protein_coding protein_coding MGP_CBAJ_T0059785.1 MGP_CBAJ_G0026788.1 mouse_genomes_project 3 18676036 18683579 + MGP_CBAJ_P0059785 Cp protein_coding protein_coding MGP_CBAJ_T0059786.1 MGP_CBAJ_G0026788.1 mouse_genomes_project 3 18677969 18680052 + Cp protein_coding retained_intron MGP_CBAJ_T0059787.1 MGP_CBAJ_G0026788.1 mouse_genomes_project 3 18679576 18701395 + MGP_CBAJ_P0059787 Cp protein_coding protein_coding MGP_CBAJ_T0060373.1 MGP_CBAJ_G0026890.1 mouse_genomes_project 3 53590675 53604232 + Rab33b protein_coding processed_transcript MGP_CBAJ_T0060374.1 MGP_CBAJ_G0026890.1 mouse_genomes_project 3 53590685 53591280 + MGP_CBAJ_P0060374 Rab33b protein_coding protein_coding MGP_CBAJ_T0060375.1 MGP_CBAJ_G0026890.1 mouse_genomes_project 3 53590719 53606287 + MGP_CBAJ_P0060375 Rab33b protein_coding protein_coding MGP_CBAJ_T0060934.1 MGP_CBAJ_G0027018.1 mouse_genomes_project 3 87838157 87894186 - MGP_CBAJ_P0060934 Gucy1a3 protein_coding protein_coding MGP_CBAJ_T0060935.1 MGP_CBAJ_G0027018.1 mouse_genomes_project 3 87838167 87894900 - MGP_CBAJ_P0060935 Gucy1a3 protein_coding protein_coding MGP_CBAJ_T0060936.1 MGP_CBAJ_G0027018.1 mouse_genomes_project 3 87840333 87847820 - MGP_CBAJ_P0060936 Gucy1a3 protein_coding protein_coding MGP_CBAJ_T0060937.1 MGP_CBAJ_G0027018.1 mouse_genomes_project 3 87852509 87894902 - Gucy1a3 protein_coding retained_intron MGP_CBAJ_T0060938.1 MGP_CBAJ_G0027018.1 mouse_genomes_project 3 87864884 87894718 - Gucy1a3 protein_coding processed_transcript MGP_CBAJ_T0060341.1 MGP_CBAJ_G0026885.1 mouse_genomes_project 3 53298463 53319950 + MGP_CBAJ_P0060341 Noct protein_coding protein_coding MGP_CBAJ_T0060342.1 MGP_CBAJ_G0026885.1 mouse_genomes_project 3 53298486 53319937 + MGP_CBAJ_P0060342 Noct protein_coding protein_coding MGP_CBAJ_T0014101.1 MGP_CBAJ_G0012213.1 mouse_genomes_project 3 134383298 134383986 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0062133.1 MGP_CBAJ_G0027283.1 mouse_genomes_project 3 104015198 104021986 - MGP_CBAJ_P0062133 Plekho1 protein_coding protein_coding MGP_CBAJ_T0062134.1 MGP_CBAJ_G0027283.1 mouse_genomes_project 3 104015216 104026460 - MGP_CBAJ_P0062134 Plekho1 protein_coding protein_coding MGP_CBAJ_T0062135.1 MGP_CBAJ_G0027283.1 mouse_genomes_project 3 104015769 104024079 - MGP_CBAJ_P0062135 Plekho1 protein_coding protein_coding MGP_CBAJ_T0062136.1 MGP_CBAJ_G0027283.1 mouse_genomes_project 3 104021652 104021986 - Plekho1 protein_coding retained_intron MGP_CBAJ_T0060743.1 MGP_CBAJ_G0026972.1 mouse_genomes_project 3 71230526 71281390 + MGP_CBAJ_P0060743 Gfm1 protein_coding protein_coding MGP_CBAJ_T0060744.1 MGP_CBAJ_G0026972.1 mouse_genomes_project 3 71230546 71263684 + Gfm1 protein_coding processed_transcript MGP_CBAJ_T0060745.1 MGP_CBAJ_G0026972.1 mouse_genomes_project 3 71230669 71263026 + MGP_CBAJ_P0060745 Gfm1 protein_coding unknown_likely_coding MGP_CBAJ_T0060746.1 MGP_CBAJ_G0026972.1 mouse_genomes_project 3 71261361 71279666 + Gfm1 protein_coding retained_intron MGP_CBAJ_T0013907.1 MGP_CBAJ_G0012019.1 mouse_genomes_project 3 71416758 71417334 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0063685.1 MGP_CBAJ_G0027619.1 mouse_genomes_project 3 156011796 156013725 + MGP_CBAJ_P0063685 Gbp3 protein_coding protein_coding MGP_CBAJ_T0063686.1 MGP_CBAJ_G0027619.1 mouse_genomes_project 3 156011822 156025018 + MGP_CBAJ_P0063686 Gbp3 protein_coding protein_coding MGP_CBAJ_T0063687.1 MGP_CBAJ_G0027619.1 mouse_genomes_project 3 156011913 156016067 + MGP_CBAJ_P0063687 Gbp3 protein_coding protein_coding MGP_CBAJ_T0063688.1 MGP_CBAJ_G0027619.1 mouse_genomes_project 3 156011915 156025025 + MGP_CBAJ_P0063688 Gbp3 protein_coding protein_coding MGP_CBAJ_T0063689.1 MGP_CBAJ_G0027619.1 mouse_genomes_project 3 156011945 156017365 + Gbp3 protein_coding processed_transcript MGP_CBAJ_T0063690.1 MGP_CBAJ_G0027619.1 mouse_genomes_project 3 156012187 156025023 + MGP_CBAJ_P0063690 Gbp3 protein_coding protein_coding MGP_CBAJ_T0063691.1 MGP_CBAJ_G0027619.1 mouse_genomes_project 3 156013020 156016911 + MGP_CBAJ_P0063691 Gbp3 protein_coding protein_coding MGP_CBAJ_T0062390.1 MGP_CBAJ_G0027356.1 mouse_genomes_project 3 110792372 110856926 + MGP_CBAJ_P0062390 Casq2 protein_coding protein_coding MGP_CBAJ_T0062391.1 MGP_CBAJ_G0027356.1 mouse_genomes_project 3 110792503 110856926 + MGP_CBAJ_P0062391 Casq2 protein_coding protein_coding MGP_CBAJ_T0062392.1 MGP_CBAJ_G0027356.1 mouse_genomes_project 3 110792596 110855744 + MGP_CBAJ_P0062392 Casq2 protein_coding protein_coding MGP_CBAJ_T0062393.1 MGP_CBAJ_G0027356.1 mouse_genomes_project 3 110834075 110855761 + Casq2 protein_coding processed_transcript MGP_CBAJ_T0062394.1 MGP_CBAJ_G0027356.1 mouse_genomes_project 3 110854463 110855998 + Casq2 protein_coding retained_intron MGP_CBAJ_T0007604.1 MGP_CBAJ_G0006211.1 mouse_genomes_project 3 143051928 143053283 - Gm43349 lincRNA lincRNA MGP_CBAJ_T0062605.1 MGP_CBAJ_G0027397.1 mouse_genomes_project 3 114844237 114927090 - MGP_CBAJ_P0062605 Rap1a protein_coding protein_coding MGP_CBAJ_T0061829.1 MGP_CBAJ_G0027234.1 mouse_genomes_project 3 102124304 102135794 - MGP_CBAJ_P0061829 Riiad1 protein_coding protein_coding MGP_CBAJ_T0061830.1 MGP_CBAJ_G0027234.1 mouse_genomes_project 3 102124306 102146239 - Riiad1 protein_coding processed_transcript MGP_CBAJ_T0061831.1 MGP_CBAJ_G0027234.1 mouse_genomes_project 3 102128828 102135125 - Riiad1 protein_coding processed_transcript MGP_CBAJ_T0007465.1 MGP_CBAJ_G0006105.1 mouse_genomes_project 3 71376833 71379090 - 4930402C01Rik lincRNA lincRNA MGP_CBAJ_T0099204.1 MGP_CBAJ_G0037459.1 mouse_genomes_project 3 105340243 105340353 - Gm24435 snRNA snRNA MGP_CBAJ_T0064062.1 MGP_CBAJ_G0027683.1 mouse_genomes_project 3 170205164 170220190 - MGP_CBAJ_P0064062 Fpgt protein_coding protein_coding MGP_CBAJ_T0064063.1 MGP_CBAJ_G0027683.1 mouse_genomes_project 3 170214511 170219984 - Fpgt protein_coding processed_transcript MGP_CBAJ_T0064064.1 MGP_CBAJ_G0027683.1 mouse_genomes_project 3 170215820 170217312 - Fpgt protein_coding retained_intron MGP_CBAJ_T0064065.1 MGP_CBAJ_G0027683.1 mouse_genomes_project 3 170217735 170220155 - Fpgt protein_coding retained_intron MGP_CBAJ_T0064066.1 MGP_CBAJ_G0027683.1 mouse_genomes_project 3 170218111 170219342 - Fpgt protein_coding processed_transcript MGP_CBAJ_T0064067.1 MGP_CBAJ_G0027683.1 mouse_genomes_project 3 170218196 170220014 - Fpgt protein_coding processed_transcript MGP_CBAJ_T0007639.1 MGP_CBAJ_G0006242.1 mouse_genomes_project 3 157152219 157153684 - Gm43616 lincRNA lincRNA MGP_CBAJ_T0013845.1 MGP_CBAJ_G0011957.1 mouse_genomes_project 3 51598397 51598932 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062683.1 MGP_CBAJ_G0027417.1 mouse_genomes_project 3 116437841 116448450 + MGP_CBAJ_P0062683 Kcna2 protein_coding protein_coding MGP_CBAJ_T0062684.1 MGP_CBAJ_G0027417.1 mouse_genomes_project 3 116438262 116457234 + MGP_CBAJ_P0062684 Kcna2 protein_coding protein_coding MGP_CBAJ_T0062685.1 MGP_CBAJ_G0027417.1 mouse_genomes_project 3 116439377 116442667 + MGP_CBAJ_P0062685 Kcna2 protein_coding protein_coding MGP_CBAJ_T0014016.1 MGP_CBAJ_G0012128.1 mouse_genomes_project 3 107635392 107635921 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014132.1 MGP_CBAJ_G0012244.1 mouse_genomes_project 3 147513840 147515142 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101112.1 MGP_CBAJ_G0039310.1 mouse_genomes_project 3 139202314 139203309 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0060508.1 MGP_CBAJ_G0026916.1 mouse_genomes_project 3 58057677 58075874 - MGP_CBAJ_P0060508 Gm21954 protein_coding protein_coding MGP_CBAJ_T0013730.1 MGP_CBAJ_G0011842.1 mouse_genomes_project 3 7934775 7934954 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001133.1 MGP_CBAJ_G0001062.1 mouse_genomes_project 3 46520968 46522513 - TEC TEC MGP_CBAJ_T0001240.1 MGP_CBAJ_G0001167.1 mouse_genomes_project 3 113679128 113682109 - TEC TEC MGP_CBAJ_T0004287.1 MGP_CBAJ_G0003743.1 mouse_genomes_project 3 141548744 141553419 - Gm35986 antisense antisense MGP_CBAJ_T0004288.1 MGP_CBAJ_G0003743.1 mouse_genomes_project 3 141548909 141553698 - Gm35986 antisense antisense MGP_CBAJ_T0059730.1 MGP_CBAJ_G0026774.1 mouse_genomes_project 3 13751522 13805136 - MGP_CBAJ_P0059730 protein_coding protein_coding MGP_CBAJ_T0059731.1 MGP_CBAJ_G0026774.1 mouse_genomes_project 3 13751522 13804814 - MGP_CBAJ_P0059731 protein_coding protein_coding MGP_CBAJ_T0059732.1 MGP_CBAJ_G0026774.1 mouse_genomes_project 3 13796546 13850822 - MGP_CBAJ_P0059732 protein_coding protein_coding MGP_CBAJ_T0013707.1 MGP_CBAJ_G0011819.1 mouse_genomes_project 3 1252385 1252815 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007407.1 MGP_CBAJ_G0006064.1 mouse_genomes_project 3 37649459 37655169 + Gm12532 lincRNA lincRNA MGP_CBAJ_T0004144.1 MGP_CBAJ_G0003647.1 mouse_genomes_project 3 36331814 36341842 + Mccc1os antisense antisense MGP_CBAJ_T0004145.1 MGP_CBAJ_G0003647.1 mouse_genomes_project 3 36331894 36343716 + Mccc1os antisense antisense MGP_CBAJ_T0004146.1 MGP_CBAJ_G0003647.1 mouse_genomes_project 3 36332416 36359959 + Mccc1os antisense antisense MGP_CBAJ_T0061778.1 MGP_CBAJ_G0027213.1 mouse_genomes_project 3 100332921 100334113 + MGP_CBAJ_P0061778 protein_coding protein_coding MGP_CBAJ_T0013833.1 MGP_CBAJ_G0011945.1 mouse_genomes_project 3 46593319 46593569 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060086.1 MGP_CBAJ_G0026842.1 mouse_genomes_project 3 34811346 34813397 + MGP_CBAJ_P0060086 Sox2 protein_coding protein_coding MGP_CBAJ_T0001078.1 MGP_CBAJ_G0001007.1 mouse_genomes_project 3 11259295 11262990 + TEC TEC MGP_CBAJ_T0061040.1 MGP_CBAJ_G0027045.1 mouse_genomes_project 3 92348062 92352730 - MGP_CBAJ_P0061040 Rps3a1 protein_coding protein_coding MGP_CBAJ_T0060929.1 MGP_CBAJ_G0027016.1 mouse_genomes_project 3 87724722 87743312 + Asic5 protein_coding processed_transcript MGP_CBAJ_T0060930.1 MGP_CBAJ_G0027016.1 mouse_genomes_project 3 87740567 87766037 + MGP_CBAJ_P0060930 Asic5 protein_coding protein_coding MGP_CBAJ_T0004208.1 MGP_CBAJ_G0003696.1 mouse_genomes_project 3 102785508 102788463 - B230398E01Rik antisense antisense MGP_CBAJ_T0004244.1 MGP_CBAJ_G0003718.1 mouse_genomes_project 3 114047981 114057954 + Gm42956 antisense antisense MGP_CBAJ_T0013876.1 MGP_CBAJ_G0011988.1 mouse_genomes_project 3 61321433 61321850 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007658.1 MGP_CBAJ_G0006258.1 mouse_genomes_project 3 161508745 161519859 + Gm36831 lincRNA lincRNA MGP_CBAJ_T0060284.1 MGP_CBAJ_G0026877.1 mouse_genomes_project 3 41837419 41856109 - MGP_CBAJ_P0060284 Pgrmc2 protein_coding protein_coding MGP_CBAJ_T0060285.1 MGP_CBAJ_G0026877.1 mouse_genomes_project 3 41839613 41841764 - Pgrmc2 protein_coding retained_intron MGP_CBAJ_T0007457.1 MGP_CBAJ_G0006099.1 mouse_genomes_project 3 61026318 61049003 - 1700007F19Rik lincRNA lincRNA MGP_CBAJ_T0013902.1 MGP_CBAJ_G0012014.1 mouse_genomes_project 3 69823565 69824321 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061187.1 MGP_CBAJ_G0027079.1 mouse_genomes_project 3 94831904 94857760 + MGP_CBAJ_P0061187 Cct3 protein_coding protein_coding MGP_CBAJ_T0061188.1 MGP_CBAJ_G0027079.1 mouse_genomes_project 3 94831905 94833736 + Cct3 protein_coding retained_intron MGP_CBAJ_T0061189.1 MGP_CBAJ_G0027079.1 mouse_genomes_project 3 94831911 94857500 + Cct3 protein_coding retained_intron MGP_CBAJ_T0061190.1 MGP_CBAJ_G0027079.1 mouse_genomes_project 3 94831914 94849187 + Cct3 protein_coding retained_intron MGP_CBAJ_T0061191.1 MGP_CBAJ_G0027079.1 mouse_genomes_project 3 94831941 94857500 + Cct3 protein_coding retained_intron MGP_CBAJ_T0061192.1 MGP_CBAJ_G0027079.1 mouse_genomes_project 3 94831962 94857759 + MGP_CBAJ_P0061192 Cct3 protein_coding protein_coding MGP_CBAJ_T0061193.1 MGP_CBAJ_G0027079.1 mouse_genomes_project 3 94831976 94857500 + MGP_CBAJ_P0061193 Cct3 protein_coding protein_coding MGP_CBAJ_T0061194.1 MGP_CBAJ_G0027079.1 mouse_genomes_project 3 94837603 94856643 + MGP_CBAJ_P0061194 Cct3 protein_coding protein_coding MGP_CBAJ_T0061195.1 MGP_CBAJ_G0027079.1 mouse_genomes_project 3 94856987 94857757 + Cct3 protein_coding retained_intron MGP_CBAJ_T0061196.1 MGP_CBAJ_G0027079.1 mouse_genomes_project 3 94857040 94857758 + MGP_CBAJ_P0061196 Cct3 protein_coding protein_coding MGP_CBAJ_T0001341.1 MGP_CBAJ_G0001267.1 mouse_genomes_project 3 167177275 167179587 - TEC TEC MGP_CBAJ_T0061770.1 MGP_CBAJ_G0027206.1 mouse_genomes_project 3 100121939 100123614 - MGP_CBAJ_P0061770 Lce1j protein_coding protein_coding MGP_CBAJ_T0061771.1 MGP_CBAJ_G0027206.1 mouse_genomes_project 3 100122149 100122569 - MGP_CBAJ_P0061771 Lce1j protein_coding protein_coding MGP_CBAJ_T0013960.1 MGP_CBAJ_G0012072.1 mouse_genomes_project 3 91243333 91243994 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013977.1 MGP_CBAJ_G0012089.1 mouse_genomes_project 3 97664394 97665297 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007468.1 MGP_CBAJ_G0006108.1 mouse_genomes_project 3 73101787 73134304 + Gm1647 lincRNA lincRNA MGP_CBAJ_T0013718.1 MGP_CBAJ_G0011830.1 mouse_genomes_project 3 5472088 5473940 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063011.1 MGP_CBAJ_G0027493.1 mouse_genomes_project 3 127128277 127168115 - MGP_CBAJ_P0063011 Slc35a3 protein_coding protein_coding MGP_CBAJ_T0063012.1 MGP_CBAJ_G0027493.1 mouse_genomes_project 3 127128318 127131081 - Slc35a3 protein_coding processed_transcript MGP_CBAJ_T0063013.1 MGP_CBAJ_G0027493.1 mouse_genomes_project 3 127135756 127168257 - MGP_CBAJ_P0063013 Slc35a3 protein_coding protein_coding MGP_CBAJ_T0063014.1 MGP_CBAJ_G0027493.1 mouse_genomes_project 3 127135891 127168627 - MGP_CBAJ_P0063014 Slc35a3 protein_coding protein_coding MGP_CBAJ_T0063015.1 MGP_CBAJ_G0027493.1 mouse_genomes_project 3 127146977 127168672 - Slc35a3 protein_coding retained_intron MGP_CBAJ_T0063016.1 MGP_CBAJ_G0027493.1 mouse_genomes_project 3 127150959 127169239 - MGP_CBAJ_P0063016 Slc35a3 protein_coding protein_coding MGP_CBAJ_T0017712.1 MGP_CBAJ_G0015253.1 mouse_genomes_project 3 102011406 102015743 - Gm36070 processed_transcript lincRNA MGP_CBAJ_T0017713.1 MGP_CBAJ_G0015253.1 mouse_genomes_project 3 102012225 102014113 - Gm36070 processed_transcript retained_intron MGP_CBAJ_T0014185.1 MGP_CBAJ_G0012297.1 mouse_genomes_project 3 167736191 167736358 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0059664.1 MGP_CBAJ_G0026752.1 mouse_genomes_project 3 7790988 7810600 - MGP_CBAJ_P0059664 Gm37389 protein_coding nonsense_mediated_decay MGP_CBAJ_T0001324.1 MGP_CBAJ_G0001250.1 mouse_genomes_project 3 148472306 148474567 + TEC TEC MGP_CBAJ_T0061133.1 MGP_CBAJ_G0027065.1 mouse_genomes_project 3 94384777 94392086 - Rrnad1 protein_coding retained_intron MGP_CBAJ_T0061134.1 MGP_CBAJ_G0027065.1 mouse_genomes_project 3 94384777 94392086 - MGP_CBAJ_P0061134 Rrnad1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061135.1 MGP_CBAJ_G0027065.1 mouse_genomes_project 3 94385083 94392103 - MGP_CBAJ_P0061135 Rrnad1 protein_coding protein_coding MGP_CBAJ_T0061136.1 MGP_CBAJ_G0027065.1 mouse_genomes_project 3 94385492 94391320 - Rrnad1 protein_coding retained_intron MGP_CBAJ_T0061137.1 MGP_CBAJ_G0027065.1 mouse_genomes_project 3 94385834 94390217 - MGP_CBAJ_P0061137 Rrnad1 protein_coding protein_coding MGP_CBAJ_T0061138.1 MGP_CBAJ_G0027065.1 mouse_genomes_project 3 94385835 94387452 - Rrnad1 protein_coding processed_transcript MGP_CBAJ_T0061139.1 MGP_CBAJ_G0027065.1 mouse_genomes_project 3 94385839 94392103 - Rrnad1 protein_coding retained_intron MGP_CBAJ_T0061140.1 MGP_CBAJ_G0027065.1 mouse_genomes_project 3 94385839 94392676 - Rrnad1 protein_coding retained_intron MGP_CBAJ_T0061141.1 MGP_CBAJ_G0027065.1 mouse_genomes_project 3 94385959 94392542 - MGP_CBAJ_P0061141 Rrnad1 protein_coding protein_coding MGP_CBAJ_T0061142.1 MGP_CBAJ_G0027065.1 mouse_genomes_project 3 94387229 94389051 - Rrnad1 protein_coding retained_intron MGP_CBAJ_T0061143.1 MGP_CBAJ_G0027065.1 mouse_genomes_project 3 94387402 94389667 - Rrnad1 protein_coding processed_transcript MGP_CBAJ_T0061144.1 MGP_CBAJ_G0027065.1 mouse_genomes_project 3 94387432 94392097 - MGP_CBAJ_P0061144 Rrnad1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060521.1 MGP_CBAJ_G0026919.1 mouse_genomes_project 3 60066956 60086965 - MGP_CBAJ_P0060521 Tm4sf1 protein_coding protein_coding MGP_CBAJ_T0060522.1 MGP_CBAJ_G0026919.1 mouse_genomes_project 3 60066956 60076241 - MGP_CBAJ_P0060522 Tm4sf1 protein_coding protein_coding MGP_CBAJ_T0060523.1 MGP_CBAJ_G0026919.1 mouse_genomes_project 3 60068829 60087017 - MGP_CBAJ_P0060523 Tm4sf1 protein_coding protein_coding MGP_CBAJ_T0060524.1 MGP_CBAJ_G0026919.1 mouse_genomes_project 3 60068861 60075904 - Tm4sf1 protein_coding processed_transcript MGP_CBAJ_T0060525.1 MGP_CBAJ_G0026919.1 mouse_genomes_project 3 60074134 60076477 - MGP_CBAJ_P0060525 Tm4sf1 protein_coding protein_coding MGP_CBAJ_T0060526.1 MGP_CBAJ_G0026919.1 mouse_genomes_project 3 60074170 60075055 - Tm4sf1 protein_coding retained_intron MGP_CBAJ_T0101320.1 MGP_CBAJ_G0039420.1 mouse_genomes_project 3 151228675 151237243 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101321.1 MGP_CBAJ_G0039420.1 mouse_genomes_project 3 151230736 151244349 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101322.1 MGP_CBAJ_G0039420.1 mouse_genomes_project 3 151238943 151245421 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0007589.1 MGP_CBAJ_G0006198.1 mouse_genomes_project 3 136228541 136355119 + Gm42825 lincRNA lincRNA MGP_CBAJ_T0014053.1 MGP_CBAJ_G0012165.1 mouse_genomes_project 3 117504221 117504665 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013807.1 MGP_CBAJ_G0011919.1 mouse_genomes_project 3 37565300 37566125 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063386.1 MGP_CBAJ_G0027558.1 mouse_genomes_project 3 142812417 142826181 - MGP_CBAJ_P0063386 Ostc protein_coding protein_coding MGP_CBAJ_T0063387.1 MGP_CBAJ_G0027558.1 mouse_genomes_project 3 142812424 142813128 - Ostc protein_coding retained_intron MGP_CBAJ_T0063388.1 MGP_CBAJ_G0027558.1 mouse_genomes_project 3 142824433 142826153 - Ostc protein_coding retained_intron MGP_CBAJ_T0014157.1 MGP_CBAJ_G0012269.1 mouse_genomes_project 3 153714217 153714759 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004127.1 MGP_CBAJ_G0003636.1 mouse_genomes_project 3 28227011 28325855 - antisense antisense MGP_CBAJ_T0004128.1 MGP_CBAJ_G0003636.1 mouse_genomes_project 3 28273131 28276574 - antisense antisense MGP_CBAJ_T0004245.1 MGP_CBAJ_G0003719.1 mouse_genomes_project 3 114530710 114541518 - Kcnd3os antisense antisense MGP_CBAJ_T0004246.1 MGP_CBAJ_G0003719.1 mouse_genomes_project 3 114537926 114544657 - Kcnd3os antisense antisense MGP_CBAJ_T0004173.1 MGP_CBAJ_G0003670.1 mouse_genomes_project 3 67421724 67426751 + Gm26850 antisense antisense MGP_CBAJ_T0004174.1 MGP_CBAJ_G0003670.1 mouse_genomes_project 3 67421726 67423542 + Gm26850 antisense antisense MGP_CBAJ_T0001171.1 MGP_CBAJ_G0001098.1 mouse_genomes_project 3 55373742 55376401 + TEC TEC MGP_CBAJ_T0010393.1 MGP_CBAJ_G0008531.1 mouse_genomes_project 3 72966269 72966364 + Mir16-2 miRNA miRNA MGP_CBAJ_T0099183.1 MGP_CBAJ_G0037438.1 mouse_genomes_project 3 92156241 92156305 - Gm27811 snRNA snRNA MGP_CBAJ_T0001358.1 MGP_CBAJ_G0001284.1 mouse_genomes_project 3 173304737 173306968 - TEC TEC MGP_CBAJ_T0098355.1 MGP_CBAJ_G0036621.1 mouse_genomes_project 3 113091007 113095194 - Gm42702 sense_intronic sense_intronic MGP_CBAJ_T0013928.1 MGP_CBAJ_G0012040.1 mouse_genomes_project 3 76296318 76296477 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013962.1 MGP_CBAJ_G0012074.1 mouse_genomes_project 3 92101665 92101942 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010400.1 MGP_CBAJ_G0008538.1 mouse_genomes_project 3 95048518 95048591 - Mir7011 miRNA miRNA MGP_CBAJ_T0061384.1 MGP_CBAJ_G0027108.1 mouse_genomes_project 3 95936939 95942305 + MGP_CBAJ_P0061384 Scamp3 protein_coding protein_coding MGP_CBAJ_T0061385.1 MGP_CBAJ_G0027108.1 mouse_genomes_project 3 95936956 95942305 + MGP_CBAJ_P0061385 Scamp3 protein_coding protein_coding MGP_CBAJ_T0061386.1 MGP_CBAJ_G0027108.1 mouse_genomes_project 3 95936962 95939132 + Scamp3 protein_coding retained_intron MGP_CBAJ_T0061387.1 MGP_CBAJ_G0027108.1 mouse_genomes_project 3 95936986 95942303 + MGP_CBAJ_P0061387 Scamp3 protein_coding protein_coding MGP_CBAJ_T0061388.1 MGP_CBAJ_G0027108.1 mouse_genomes_project 3 95936997 95938919 + Scamp3 protein_coding retained_intron MGP_CBAJ_T0061389.1 MGP_CBAJ_G0027108.1 mouse_genomes_project 3 95937003 95939131 + Scamp3 protein_coding retained_intron MGP_CBAJ_T0061390.1 MGP_CBAJ_G0027108.1 mouse_genomes_project 3 95937087 95940816 + Scamp3 protein_coding retained_intron MGP_CBAJ_T0061391.1 MGP_CBAJ_G0027108.1 mouse_genomes_project 3 95937224 95939852 + Scamp3 protein_coding retained_intron MGP_CBAJ_T0101105.1 MGP_CBAJ_G0039306.1 mouse_genomes_project 3 102076401 102077175 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101106.1 MGP_CBAJ_G0039306.1 mouse_genomes_project 3 102076592 102077009 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0010406.1 MGP_CBAJ_G0008544.1 mouse_genomes_project 3 99234543 99234653 - Gm23697 miRNA miRNA MGP_CBAJ_T0060243.1 MGP_CBAJ_G0026872.1 mouse_genomes_project 3 41525247 41542050 + MGP_CBAJ_P0060243 Plk4 protein_coding protein_coding MGP_CBAJ_T0060244.1 MGP_CBAJ_G0026872.1 mouse_genomes_project 3 41525256 41533584 + Plk4 protein_coding retained_intron MGP_CBAJ_T0060245.1 MGP_CBAJ_G0026872.1 mouse_genomes_project 3 41525270 41526852 + Plk4 protein_coding retained_intron MGP_CBAJ_T0060246.1 MGP_CBAJ_G0026872.1 mouse_genomes_project 3 41525270 41541918 + MGP_CBAJ_P0060246 Plk4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060247.1 MGP_CBAJ_G0026872.1 mouse_genomes_project 3 41525278 41531313 + Plk4 protein_coding retained_intron MGP_CBAJ_T0060248.1 MGP_CBAJ_G0026872.1 mouse_genomes_project 3 41525282 41542050 + MGP_CBAJ_P0060248 Plk4 protein_coding protein_coding MGP_CBAJ_T0060249.1 MGP_CBAJ_G0026872.1 mouse_genomes_project 3 41525482 41541584 + MGP_CBAJ_P0060249 Plk4 protein_coding protein_coding MGP_CBAJ_T0060250.1 MGP_CBAJ_G0026872.1 mouse_genomes_project 3 41526009 41530261 + MGP_CBAJ_P0060250 Plk4 protein_coding protein_coding MGP_CBAJ_T0060251.1 MGP_CBAJ_G0026872.1 mouse_genomes_project 3 41526691 41527273 + Plk4 protein_coding retained_intron MGP_CBAJ_T0060252.1 MGP_CBAJ_G0026872.1 mouse_genomes_project 3 41537904 41542049 + MGP_CBAJ_P0060252 Plk4 protein_coding protein_coding MGP_CBAJ_T0063729.1 MGP_CBAJ_G0027627.1 mouse_genomes_project 3 158214423 158241512 + protein_coding processed_transcript MGP_CBAJ_T0063730.1 MGP_CBAJ_G0027627.1 mouse_genomes_project 3 158214545 158241935 + MGP_CBAJ_P0063730 protein_coding protein_coding MGP_CBAJ_T0063731.1 MGP_CBAJ_G0027627.1 mouse_genomes_project 3 158214812 158241916 + MGP_CBAJ_P0063731 protein_coding protein_coding MGP_CBAJ_T0063732.1 MGP_CBAJ_G0027627.1 mouse_genomes_project 3 158214833 158217532 + protein_coding retained_intron MGP_CBAJ_T0063733.1 MGP_CBAJ_G0027627.1 mouse_genomes_project 3 158221771 158239687 + MGP_CBAJ_P0063733 protein_coding protein_coding MGP_CBAJ_T0063734.1 MGP_CBAJ_G0027627.1 mouse_genomes_project 3 158234679 158235845 + protein_coding retained_intron MGP_CBAJ_T0061793.1 MGP_CBAJ_G0027221.1 mouse_genomes_project 3 100853845 100859589 + MGP_CBAJ_P0061793 Rptn protein_coding protein_coding MGP_CBAJ_T0001120.1 MGP_CBAJ_G0001049.1 mouse_genomes_project 3 38373257 38374526 + TEC TEC MGP_CBAJ_T0007567.1 MGP_CBAJ_G0006183.1 mouse_genomes_project 3 126539226 126560699 + Gm26544 lincRNA lincRNA MGP_CBAJ_T0004296.1 MGP_CBAJ_G0003750.1 mouse_genomes_project 3 147993381 147995838 - 4930539J05Rik antisense antisense MGP_CBAJ_T0004297.1 MGP_CBAJ_G0003750.1 mouse_genomes_project 3 147993398 147994932 - 4930539J05Rik antisense antisense MGP_CBAJ_T0060889.1 MGP_CBAJ_G0027008.1 mouse_genomes_project 3 85098359 85207545 - MGP_CBAJ_P0060889 Rxfp1 protein_coding protein_coding MGP_CBAJ_T0060890.1 MGP_CBAJ_G0027008.1 mouse_genomes_project 3 85100852 85207631 - MGP_CBAJ_P0060890 Rxfp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060891.1 MGP_CBAJ_G0027008.1 mouse_genomes_project 3 85108387 85110270 - Rxfp1 protein_coding retained_intron MGP_CBAJ_T0060892.1 MGP_CBAJ_G0027008.1 mouse_genomes_project 3 85112051 85124550 - Rxfp1 protein_coding processed_transcript MGP_CBAJ_T0010424.1 MGP_CBAJ_G0008562.1 mouse_genomes_project 3 139287584 139287658 + Mir302b miRNA miRNA MGP_CBAJ_T0100434.1 MGP_CBAJ_G0038689.1 mouse_genomes_project 3 21379253 21379382 - Gm26354 snoRNA snoRNA MGP_CBAJ_T0061167.1 MGP_CBAJ_G0027073.1 mouse_genomes_project 3 94557409 94566176 - MGP_CBAJ_P0061167 Ttc24 protein_coding protein_coding MGP_CBAJ_T0061168.1 MGP_CBAJ_G0027073.1 mouse_genomes_project 3 94557812 94560072 - MGP_CBAJ_P0061168 Ttc24 protein_coding protein_coding MGP_CBAJ_T0061063.1 MGP_CBAJ_G0027051.1 mouse_genomes_project 3 93610805 93623686 - MGP_CBAJ_P0061063 Fcrls protein_coding protein_coding MGP_CBAJ_T0061064.1 MGP_CBAJ_G0027051.1 mouse_genomes_project 3 93619016 93623825 - MGP_CBAJ_P0061064 Fcrls protein_coding protein_coding MGP_CBAJ_T0007347.1 MGP_CBAJ_G0006019.1 mouse_genomes_project 3 6077007 6080338 - C230057A21Rik lincRNA lincRNA MGP_CBAJ_T0007348.1 MGP_CBAJ_G0006019.1 mouse_genomes_project 3 6077202 6080498 - C230057A21Rik lincRNA lincRNA MGP_CBAJ_T0001075.1 MGP_CBAJ_G0001004.1 mouse_genomes_project 3 7930528 7930858 + TEC TEC MGP_CBAJ_T0010399.1 MGP_CBAJ_G0008537.1 mouse_genomes_project 3 94735133 94735222 + Mir9-1 miRNA miRNA MGP_CBAJ_T0062410.1 MGP_CBAJ_G0027360.1 mouse_genomes_project 3 111524829 111529240 - Tshb protein_coding retained_intron MGP_CBAJ_T0062411.1 MGP_CBAJ_G0027360.1 mouse_genomes_project 3 111526762 111531734 - MGP_CBAJ_P0062411 Tshb protein_coding protein_coding MGP_CBAJ_T0062412.1 MGP_CBAJ_G0027360.1 mouse_genomes_project 3 111526762 111531694 - MGP_CBAJ_P0062412 Tshb protein_coding protein_coding MGP_CBAJ_T0062413.1 MGP_CBAJ_G0027360.1 mouse_genomes_project 3 111526771 111531738 - MGP_CBAJ_P0062413 Tshb protein_coding protein_coding MGP_CBAJ_T0062414.1 MGP_CBAJ_G0027360.1 mouse_genomes_project 3 111526783 111531694 - MGP_CBAJ_P0062414 Tshb protein_coding protein_coding MGP_CBAJ_T0062415.1 MGP_CBAJ_G0027360.1 mouse_genomes_project 3 111526810 111531503 - MGP_CBAJ_P0062415 Tshb protein_coding protein_coding MGP_CBAJ_T0001346.1 MGP_CBAJ_G0001272.1 mouse_genomes_project 3 168212228 168215546 - TEC TEC MGP_CBAJ_T0001207.1 MGP_CBAJ_G0001134.1 mouse_genomes_project 3 80648121 80648634 - TEC TEC MGP_CBAJ_T0063472.1 MGP_CBAJ_G0027576.1 mouse_genomes_project 3 146671010 146697651 + Cxxc4 protein_coding processed_transcript MGP_CBAJ_T0063473.1 MGP_CBAJ_G0027576.1 mouse_genomes_project 3 146671017 146700192 + MGP_CBAJ_P0063473 Cxxc4 protein_coding protein_coding MGP_CBAJ_T0063474.1 MGP_CBAJ_G0027576.1 mouse_genomes_project 3 146671021 146672912 + Cxxc4 protein_coding retained_intron MGP_CBAJ_T0063475.1 MGP_CBAJ_G0027576.1 mouse_genomes_project 3 146671346 146696262 + MGP_CBAJ_P0063475 Cxxc4 protein_coding protein_coding MGP_CBAJ_T0063476.1 MGP_CBAJ_G0027576.1 mouse_genomes_project 3 146675060 146681388 + Cxxc4 protein_coding retained_intron MGP_CBAJ_T0010398.1 MGP_CBAJ_G0008536.1 mouse_genomes_project 3 94735124 94735232 - Gm25641 miRNA miRNA MGP_CBAJ_T0007361.1 MGP_CBAJ_G0006027.1 mouse_genomes_project 3 11441824 11444515 - Gm2464 lincRNA lincRNA MGP_CBAJ_T0060719.1 MGP_CBAJ_G0026967.1 mouse_genomes_project 3 69746295 70000216 - MGP_CBAJ_P0060719 Veph1 protein_coding protein_coding MGP_CBAJ_T0060720.1 MGP_CBAJ_G0026967.1 mouse_genomes_project 3 69749347 69831056 - Veph1 protein_coding processed_transcript MGP_CBAJ_T0060721.1 MGP_CBAJ_G0026967.1 mouse_genomes_project 3 69749815 69925779 - MGP_CBAJ_P0060721 Veph1 protein_coding unknown_likely_coding MGP_CBAJ_T0060724.1 MGP_CBAJ_G0026967.1 mouse_genomes_project 3 69951697 70000127 - Veph1 protein_coding retained_intron MGP_CBAJ_T0007497.1 MGP_CBAJ_G0006132.1 mouse_genomes_project 3 91696512 91705588 - Gm42812 lincRNA lincRNA MGP_CBAJ_T0013754.1 MGP_CBAJ_G0011866.1 mouse_genomes_project 3 15804616 15805121 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061736.1 MGP_CBAJ_G0027175.1 mouse_genomes_project 3 99312383 99315255 - MGP_CBAJ_P0061736 Lor protein_coding protein_coding MGP_CBAJ_T0004228.1 MGP_CBAJ_G0003708.1 mouse_genomes_project 3 106003691 106009509 + Gm43076 antisense antisense MGP_CBAJ_T0004229.1 MGP_CBAJ_G0003708.1 mouse_genomes_project 3 106003881 106006418 + Gm43076 antisense antisense MGP_CBAJ_T0061763.1 MGP_CBAJ_G0027199.1 mouse_genomes_project 3 100011773 100013485 - MGP_CBAJ_P0061763 Lce1d protein_coding protein_coding MGP_CBAJ_T0099154.1 MGP_CBAJ_G0037409.1 mouse_genomes_project 3 33043909 33044067 + Gm23214 snRNA snRNA MGP_CBAJ_T0001158.1 MGP_CBAJ_G0001086.1 mouse_genomes_project 3 53977276 53978297 - TEC TEC MGP_CBAJ_T0007653.1 MGP_CBAJ_G0006254.1 mouse_genomes_project 3 159549257 159551378 + lincRNA lincRNA MGP_CBAJ_T0007654.1 MGP_CBAJ_G0006254.1 mouse_genomes_project 3 159550998 159594994 + lincRNA lincRNA MGP_CBAJ_T0099168.1 MGP_CBAJ_G0037423.1 mouse_genomes_project 3 61957523 61957625 + Gm22491 snRNA snRNA MGP_CBAJ_T0004160.1 MGP_CBAJ_G0003660.1 mouse_genomes_project 3 55402492 55405509 - Gm43803 antisense antisense MGP_CBAJ_T0004161.1 MGP_CBAJ_G0003660.1 mouse_genomes_project 3 55402509 55403813 - Gm43803 antisense antisense MGP_CBAJ_T0101318.1 MGP_CBAJ_G0039418.1 mouse_genomes_project 3 102376227 102385186 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0013766.1 MGP_CBAJ_G0011878.1 mouse_genomes_project 3 19158323 19159296 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061525.1 MGP_CBAJ_G0027132.1 mouse_genomes_project 3 96339155 96491979 + MGP_CBAJ_P0061525 Kcnn3 protein_coding protein_coding MGP_CBAJ_T0061526.1 MGP_CBAJ_G0027132.1 mouse_genomes_project 3 96486757 96499346 + Kcnn3 protein_coding retained_intron MGP_CBAJ_T0063155.1 MGP_CBAJ_G0027520.1 mouse_genomes_project 3 134148957 134150940 + MGP_CBAJ_P0063155 1810037I17Rik protein_coding protein_coding MGP_CBAJ_T0007537.1 MGP_CBAJ_G0006159.1 mouse_genomes_project 3 108938406 108977016 + Gm12474 lincRNA lincRNA MGP_CBAJ_T0062160.1 MGP_CBAJ_G0027289.1 mouse_genomes_project 3 104247663 104249565 - MGP_CBAJ_P0062160 Bola1 protein_coding protein_coding MGP_CBAJ_T0062161.1 MGP_CBAJ_G0027289.1 mouse_genomes_project 3 104247663 104248662 - MGP_CBAJ_P0062161 Bola1 protein_coding protein_coding MGP_CBAJ_T0062162.1 MGP_CBAJ_G0027289.1 mouse_genomes_project 3 104247938 104265511 - MGP_CBAJ_P0062162 Bola1 protein_coding protein_coding MGP_CBAJ_T0063527.1 MGP_CBAJ_G0027585.1 mouse_genomes_project 3 148159214 148278616 - MGP_CBAJ_P0063527 Nfkb1 protein_coding protein_coding MGP_CBAJ_T0063528.1 MGP_CBAJ_G0027585.1 mouse_genomes_project 3 148159216 148187433 - MGP_CBAJ_P0063528 Nfkb1 protein_coding protein_coding MGP_CBAJ_T0063529.1 MGP_CBAJ_G0027585.1 mouse_genomes_project 3 148159304 148182931 - MGP_CBAJ_P0063529 Nfkb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063530.1 MGP_CBAJ_G0027585.1 mouse_genomes_project 3 148159441 148187646 - Nfkb1 protein_coding retained_intron MGP_CBAJ_T0063531.1 MGP_CBAJ_G0027585.1 mouse_genomes_project 3 148159837 148250169 - MGP_CBAJ_P0063531 Nfkb1 protein_coding protein_coding MGP_CBAJ_T0063532.1 MGP_CBAJ_G0027585.1 mouse_genomes_project 3 148159840 148251709 - MGP_CBAJ_P0063532 Nfkb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063533.1 MGP_CBAJ_G0027585.1 mouse_genomes_project 3 148167777 148171439 - Nfkb1 protein_coding processed_transcript MGP_CBAJ_T0063534.1 MGP_CBAJ_G0027585.1 mouse_genomes_project 3 148180993 148182994 - Nfkb1 protein_coding retained_intron MGP_CBAJ_T0063535.1 MGP_CBAJ_G0027585.1 mouse_genomes_project 3 148189752 148278617 - Nfkb1 protein_coding retained_intron MGP_CBAJ_T0063536.1 MGP_CBAJ_G0027585.1 mouse_genomes_project 3 148197150 148201276 - Nfkb1 protein_coding retained_intron MGP_CBAJ_T0004242.1 MGP_CBAJ_G0003716.1 mouse_genomes_project 3 112897946 112901992 - Phtf1os antisense antisense MGP_CBAJ_T0013786.1 MGP_CBAJ_G0011898.1 mouse_genomes_project 3 30284185 30284658 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099202.1 MGP_CBAJ_G0037457.1 mouse_genomes_project 3 104560449 104569589 + Rnu1b6 snRNA snRNA MGP_CBAJ_T0062712.1 MGP_CBAJ_G0027428.1 mouse_genomes_project 3 117010494 117024250 + MGP_CBAJ_P0062712 Alx3 protein_coding protein_coding MGP_CBAJ_T0001154.1 MGP_CBAJ_G0001083.1 mouse_genomes_project 3 53796140 53797241 + TEC TEC MGP_CBAJ_T0059665.1 MGP_CBAJ_G0026753.1 mouse_genomes_project 3 7806958 7810560 - MGP_CBAJ_P0059665 protein_coding protein_coding MGP_CBAJ_T0059666.1 MGP_CBAJ_G0026753.1 mouse_genomes_project 3 7806960 7810621 - MGP_CBAJ_P0059666 protein_coding protein_coding MGP_CBAJ_T0059667.1 MGP_CBAJ_G0026753.1 mouse_genomes_project 3 7806963 7810560 - MGP_CBAJ_P0059667 protein_coding protein_coding MGP_CBAJ_T0060467.1 MGP_CBAJ_G0026908.1 mouse_genomes_project 3 57310670 57328089 + MGP_CBAJ_P0060467 Smad9 protein_coding protein_coding MGP_CBAJ_T0101873.1 MGP_CBAJ_G0039904.1 mouse_genomes_project 3 117419095 117421422 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0001365.1 MGP_CBAJ_G0001291.1 mouse_genomes_project 3 175384798 175387220 + TEC TEC MGP_CBAJ_T0011416.1 MGP_CBAJ_G0009554.1 mouse_genomes_project 3 89527331 89527629 - Gm22342 misc_RNA misc_RNA MGP_CBAJ_T0001088.1 MGP_CBAJ_G0001017.1 mouse_genomes_project 3 28779260 28781360 + TEC TEC MGP_CBAJ_T0007378.1 MGP_CBAJ_G0006037.1 mouse_genomes_project 3 20115462 20116181 - Gm29137 lincRNA lincRNA MGP_CBAJ_T0061146.1 MGP_CBAJ_G0027067.1 mouse_genomes_project 3 94414024 94418756 + MGP_CBAJ_P0061146 Crabp2 protein_coding protein_coding MGP_CBAJ_T0061147.1 MGP_CBAJ_G0027067.1 mouse_genomes_project 3 94417523 94418365 + Crabp2 protein_coding retained_intron MGP_CBAJ_T0014034.1 MGP_CBAJ_G0012146.1 mouse_genomes_project 3 111643933 111644222 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007343.1 MGP_CBAJ_G0006016.1 mouse_genomes_project 3 2505171 2507510 - 4930555M17Rik lincRNA lincRNA MGP_CBAJ_T0001125.1 MGP_CBAJ_G0001054.1 mouse_genomes_project 3 41773827 41777487 + TEC TEC MGP_CBAJ_T0014186.1 MGP_CBAJ_G0012298.1 mouse_genomes_project 3 168707983 168708276 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063683.1 MGP_CBAJ_G0027618.1 mouse_genomes_project 3 155977987 155996981 + MGP_CBAJ_P0063683 Gbp7 protein_coding protein_coding MGP_CBAJ_T0063684.1 MGP_CBAJ_G0027618.1 mouse_genomes_project 3 155977987 156000051 + MGP_CBAJ_P0063684 Gbp7 protein_coding protein_coding MGP_CBAJ_T0013802.1 MGP_CBAJ_G0011914.1 mouse_genomes_project 3 36967555 36968254 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0059860.1 MGP_CBAJ_G0026803.1 mouse_genomes_project 3 26788691 27133707 - MGP_CBAJ_P0059860 Fndc3b protein_coding protein_coding MGP_CBAJ_T0059861.1 MGP_CBAJ_G0026803.1 mouse_genomes_project 3 26788691 27133748 - MGP_CBAJ_P0059861 Fndc3b protein_coding protein_coding MGP_CBAJ_T0059862.1 MGP_CBAJ_G0026803.1 mouse_genomes_project 3 26881027 27134616 - Fndc3b protein_coding retained_intron MGP_CBAJ_T0059863.1 MGP_CBAJ_G0026803.1 mouse_genomes_project 3 26888040 27134548 - MGP_CBAJ_P0059863 Fndc3b protein_coding protein_coding MGP_CBAJ_T0001076.1 MGP_CBAJ_G0001005.1 mouse_genomes_project 3 8330525 8332312 + TEC TEC MGP_CBAJ_T0007474.1 MGP_CBAJ_G0006113.1 mouse_genomes_project 3 78722376 78730454 - Gm20356 lincRNA lincRNA MGP_CBAJ_T0098380.1 MGP_CBAJ_G0036646.1 mouse_genomes_project 3 158159219 158159992 - Gm43560 sense_intronic sense_intronic MGP_CBAJ_T0062996.1 MGP_CBAJ_G0027490.1 mouse_genomes_project 3 127042282 127068986 + MGP_CBAJ_P0062996 Sass6 protein_coding protein_coding MGP_CBAJ_T0062997.1 MGP_CBAJ_G0027490.1 mouse_genomes_project 3 127042303 127052844 + Sass6 protein_coding processed_transcript MGP_CBAJ_T0062998.1 MGP_CBAJ_G0027490.1 mouse_genomes_project 3 127042312 127080907 + MGP_CBAJ_P0062998 Sass6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062999.1 MGP_CBAJ_G0027490.1 mouse_genomes_project 3 127042371 127078703 + MGP_CBAJ_P0062999 Sass6 protein_coding protein_coding MGP_CBAJ_T0063001.1 MGP_CBAJ_G0027490.1 mouse_genomes_project 3 127060712 127066635 + Sass6 protein_coding processed_transcript MGP_CBAJ_T0063003.1 MGP_CBAJ_G0027490.1 mouse_genomes_project 3 127068842 127077455 + Sass6 protein_coding retained_intron MGP_CBAJ_T0063004.1 MGP_CBAJ_G0027490.1 mouse_genomes_project 3 127075837 127079021 + Sass6 protein_coding retained_intron MGP_CBAJ_T0059985.1 MGP_CBAJ_G0026826.1 mouse_genomes_project 3 31807364 32111473 + MGP_CBAJ_P0059985 Kcnmb2 protein_coding protein_coding MGP_CBAJ_T0059986.1 MGP_CBAJ_G0026826.1 mouse_genomes_project 3 32071681 32110068 + MGP_CBAJ_P0059986 Kcnmb2 protein_coding protein_coding MGP_CBAJ_T0059970.1 MGP_CBAJ_G0026822.1 mouse_genomes_project 3 30778155 30840684 + MGP_CBAJ_P0059970 Prkci protein_coding protein_coding MGP_CBAJ_T0059971.1 MGP_CBAJ_G0026822.1 mouse_genomes_project 3 30787601 30821229 + MGP_CBAJ_P0059971 Prkci protein_coding protein_coding MGP_CBAJ_T0059972.1 MGP_CBAJ_G0026822.1 mouse_genomes_project 3 30818437 30827189 + Prkci protein_coding processed_transcript MGP_CBAJ_T0059973.1 MGP_CBAJ_G0026822.1 mouse_genomes_project 3 30826241 30829016 + MGP_CBAJ_P0059973 Prkci protein_coding protein_coding MGP_CBAJ_T0059974.1 MGP_CBAJ_G0026822.1 mouse_genomes_project 3 30826306 30827761 + Prkci protein_coding retained_intron MGP_CBAJ_T0063654.1 MGP_CBAJ_G0027612.1 mouse_genomes_project 3 152216192 152780628 + MGP_CBAJ_P0063654 Stpg2 protein_coding protein_coding MGP_CBAJ_T0063655.1 MGP_CBAJ_G0027612.1 mouse_genomes_project 3 152216391 152781317 + MGP_CBAJ_P0063655 Stpg2 protein_coding protein_coding MGP_CBAJ_T0014178.1 MGP_CBAJ_G0012290.1 mouse_genomes_project 3 162921168 162921683 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099191.1 MGP_CBAJ_G0037446.1 mouse_genomes_project 3 95958079 95958186 - Gm23269 snRNA snRNA MGP_CBAJ_T0004188.1 MGP_CBAJ_G0003681.1 mouse_genomes_project 3 91420252 91435845 + 1700036G14Rik antisense antisense MGP_CBAJ_T0099153.1 MGP_CBAJ_G0037408.1 mouse_genomes_project 3 23679903 23680010 + Gm24704 snRNA snRNA MGP_CBAJ_T0007394.1 MGP_CBAJ_G0006052.1 mouse_genomes_project 3 34545317 34546985 + Gm43208 lincRNA lincRNA MGP_CBAJ_T0013851.1 MGP_CBAJ_G0011963.1 mouse_genomes_project 3 52655384 52655760 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007513.1 MGP_CBAJ_G0006138.1 mouse_genomes_project 3 96611506 96617236 - 4632404H12Rik lincRNA lincRNA MGP_CBAJ_T0007514.1 MGP_CBAJ_G0006138.1 mouse_genomes_project 3 96612116 96616787 - 4632404H12Rik lincRNA lincRNA MGP_CBAJ_T0001242.1 MGP_CBAJ_G0001169.1 mouse_genomes_project 3 115756504 115759088 + TEC TEC MGP_CBAJ_T0010433.1 MGP_CBAJ_G0008571.1 mouse_genomes_project 3 149550423 149550540 - Gm44327 miRNA miRNA MGP_CBAJ_T0014119.1 MGP_CBAJ_G0012231.1 mouse_genomes_project 3 143060250 143061555 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062835.1 MGP_CBAJ_G0027457.1 mouse_genomes_project 3 118115809 118121852 - MGP_CBAJ_P0062835 protein_coding protein_coding MGP_CBAJ_T0062836.1 MGP_CBAJ_G0027457.1 mouse_genomes_project 3 118115809 118121556 - MGP_CBAJ_P0062836 protein_coding protein_coding MGP_CBAJ_T0060286.1 MGP_CBAJ_G0026878.1 mouse_genomes_project 3 42359659 42426031 + MGP_CBAJ_P0060286 Jade1 protein_coding protein_coding MGP_CBAJ_T0060287.1 MGP_CBAJ_G0026878.1 mouse_genomes_project 3 42359669 42402914 + MGP_CBAJ_P0060287 Jade1 protein_coding protein_coding MGP_CBAJ_T0060288.1 MGP_CBAJ_G0026878.1 mouse_genomes_project 3 42359688 42405753 + MGP_CBAJ_P0060288 Jade1 protein_coding protein_coding MGP_CBAJ_T0060289.1 MGP_CBAJ_G0026878.1 mouse_genomes_project 3 42372435 42426026 + MGP_CBAJ_P0060289 Jade1 protein_coding protein_coding MGP_CBAJ_T0060290.1 MGP_CBAJ_G0026878.1 mouse_genomes_project 3 42372477 42400867 + Jade1 protein_coding processed_transcript MGP_CBAJ_T0060291.1 MGP_CBAJ_G0026878.1 mouse_genomes_project 3 42372673 42423226 + MGP_CBAJ_P0060291 Jade1 protein_coding protein_coding MGP_CBAJ_T0060292.1 MGP_CBAJ_G0026878.1 mouse_genomes_project 3 42373955 42425279 + MGP_CBAJ_P0060292 Jade1 protein_coding protein_coding MGP_CBAJ_T0060293.1 MGP_CBAJ_G0026878.1 mouse_genomes_project 3 42373999 42400865 + Jade1 protein_coding processed_transcript MGP_CBAJ_T0060294.1 MGP_CBAJ_G0026878.1 mouse_genomes_project 3 42374021 42415863 + MGP_CBAJ_P0060294 Jade1 protein_coding protein_coding MGP_CBAJ_T0060295.1 MGP_CBAJ_G0026878.1 mouse_genomes_project 3 42389953 42398136 + Jade1 protein_coding retained_intron MGP_CBAJ_T0060296.1 MGP_CBAJ_G0026878.1 mouse_genomes_project 3 42400805 42409304 + Jade1 protein_coding retained_intron MGP_CBAJ_T0060297.1 MGP_CBAJ_G0026878.1 mouse_genomes_project 3 42402905 42413732 + Jade1 protein_coding retained_intron MGP_CBAJ_T0060298.1 MGP_CBAJ_G0026878.1 mouse_genomes_project 3 42405799 42413968 + MGP_CBAJ_P0060298 Jade1 protein_coding protein_coding MGP_CBAJ_T0060299.1 MGP_CBAJ_G0026878.1 mouse_genomes_project 3 42411597 42413975 + Jade1 protein_coding processed_transcript MGP_CBAJ_T0007463.1 MGP_CBAJ_G0006103.1 mouse_genomes_project 3 66895502 66898270 - lincRNA lincRNA MGP_CBAJ_T0007390.1 MGP_CBAJ_G0006049.1 mouse_genomes_project 3 33946492 33982397 - 4930431L21Rik lincRNA lincRNA MGP_CBAJ_T0007391.1 MGP_CBAJ_G0006049.1 mouse_genomes_project 3 33950653 33951631 - 4930431L21Rik lincRNA lincRNA MGP_CBAJ_T0100429.1 MGP_CBAJ_G0038684.1 mouse_genomes_project 3 4673682 4673799 - Gm23592 snoRNA snoRNA MGP_CBAJ_T0007356.1 MGP_CBAJ_G0006025.1 mouse_genomes_project 3 11440356 11441748 - Gm2464 lincRNA lincRNA MGP_CBAJ_T0063421.1 MGP_CBAJ_G0027567.1 mouse_genomes_project 3 144894636 144912460 + MGP_CBAJ_P0063421 Gimd1 protein_coding protein_coding MGP_CBAJ_T0063422.1 MGP_CBAJ_G0027567.1 mouse_genomes_project 3 144899170 144911741 + MGP_CBAJ_P0063422 Gimd1 protein_coding protein_coding MGP_CBAJ_T0013728.1 MGP_CBAJ_G0011840.1 mouse_genomes_project 3 7670805 7670905 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061569.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96897350 96952060 - MGP_CBAJ_P0061569 Ubap2l protein_coding protein_coding MGP_CBAJ_T0061570.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96897350 96952050 - MGP_CBAJ_P0061570 Ubap2l protein_coding protein_coding MGP_CBAJ_T0061571.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96897498 96952070 - MGP_CBAJ_P0061571 Ubap2l protein_coding protein_coding MGP_CBAJ_T0061572.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96897503 96952057 - MGP_CBAJ_P0061572 Ubap2l protein_coding protein_coding MGP_CBAJ_T0061573.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96898023 96900500 - MGP_CBAJ_P0061573 Ubap2l protein_coding protein_coding MGP_CBAJ_T0061574.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96899609 96900997 - Ubap2l protein_coding retained_intron MGP_CBAJ_T0061575.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96903204 96952047 - MGP_CBAJ_P0061575 Ubap2l protein_coding protein_coding MGP_CBAJ_T0061576.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96903429 96920956 - MGP_CBAJ_P0061576 Ubap2l protein_coding protein_coding MGP_CBAJ_T0061577.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96903430 96952110 - MGP_CBAJ_P0061577 Ubap2l protein_coding protein_coding MGP_CBAJ_T0061578.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96903430 96952067 - MGP_CBAJ_P0061578 Ubap2l protein_coding protein_coding MGP_CBAJ_T0061579.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96913863 96915962 - Ubap2l protein_coding retained_intron MGP_CBAJ_T0061580.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96914036 96920253 - Ubap2l protein_coding retained_intron MGP_CBAJ_T0061581.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96914686 96951926 - Ubap2l protein_coding retained_intron MGP_CBAJ_T0061582.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96915808 96917296 - Ubap2l protein_coding retained_intron MGP_CBAJ_T0061583.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96916220 96918160 - Ubap2l protein_coding retained_intron MGP_CBAJ_T0061584.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96919909 96927100 - Ubap2l protein_coding retained_intron MGP_CBAJ_T0061585.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96921694 96923092 - Ubap2l protein_coding retained_intron MGP_CBAJ_T0061586.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96936122 96938518 - Ubap2l protein_coding retained_intron MGP_CBAJ_T0061587.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96938641 96951677 - MGP_CBAJ_P0061587 Ubap2l protein_coding protein_coding MGP_CBAJ_T0061588.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96941409 96952097 - Ubap2l protein_coding retained_intron MGP_CBAJ_T0061589.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96943349 96952223 - MGP_CBAJ_P0061589 Ubap2l protein_coding protein_coding MGP_CBAJ_T0061590.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96943419 96952033 - MGP_CBAJ_P0061590 Ubap2l protein_coding protein_coding MGP_CBAJ_T0061591.1 MGP_CBAJ_G0027140.1 mouse_genomes_project 3 96944483 96947904 - MGP_CBAJ_P0061591 Ubap2l protein_coding protein_coding MGP_CBAJ_T0059630.1 MGP_CBAJ_G0026741.1 mouse_genomes_project 3 4675263 4737849 + MGP_CBAJ_P0059630 Zc2hc1a protein_coding protein_coding MGP_CBAJ_T0059631.1 MGP_CBAJ_G0026741.1 mouse_genomes_project 3 4675266 4736091 + MGP_CBAJ_P0059631 Zc2hc1a protein_coding protein_coding MGP_CBAJ_T0059632.1 MGP_CBAJ_G0026741.1 mouse_genomes_project 3 4714103 4735516 + Zc2hc1a protein_coding retained_intron MGP_CBAJ_T0098366.1 MGP_CBAJ_G0036632.1 mouse_genomes_project 3 113656326 113657704 + Gm43585 sense_intronic sense_intronic MGP_CBAJ_T0062797.1 MGP_CBAJ_G0027449.1 mouse_genomes_project 3 117771580 117799027 + MGP_CBAJ_P0062797 Psma5 protein_coding protein_coding MGP_CBAJ_T0062798.1 MGP_CBAJ_G0027449.1 mouse_genomes_project 3 117787927 117798949 + MGP_CBAJ_P0062798 Psma5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0007449.1 MGP_CBAJ_G0006094.1 mouse_genomes_project 3 56322734 56345299 + Gm31026 lincRNA lincRNA MGP_CBAJ_T0004170.1 MGP_CBAJ_G0003667.1 mouse_genomes_project 3 64267125 64269273 - Gm37035 antisense antisense MGP_CBAJ_T0010437.1 MGP_CBAJ_G0008575.1 mouse_genomes_project 3 156169277 156169364 - Mir6381 miRNA miRNA MGP_CBAJ_T0062247.1 MGP_CBAJ_G0027317.1 mouse_genomes_project 3 105353585 105371380 + MGP_CBAJ_P0062247 Acp6 protein_coding protein_coding MGP_CBAJ_T0062248.1 MGP_CBAJ_G0027317.1 mouse_genomes_project 3 105353904 105355204 + Acp6 protein_coding retained_intron MGP_CBAJ_T0062249.1 MGP_CBAJ_G0027317.1 mouse_genomes_project 3 105353911 105363116 + Acp6 protein_coding retained_intron MGP_CBAJ_T0062250.1 MGP_CBAJ_G0027317.1 mouse_genomes_project 3 105353911 105361855 + Acp6 protein_coding retained_intron MGP_CBAJ_T0062251.1 MGP_CBAJ_G0027317.1 mouse_genomes_project 3 105362182 105363258 + Acp6 protein_coding retained_intron MGP_CBAJ_T0062252.1 MGP_CBAJ_G0027317.1 mouse_genomes_project 3 105362899 105368675 + Acp6 protein_coding retained_intron MGP_CBAJ_T0062253.1 MGP_CBAJ_G0027317.1 mouse_genomes_project 3 105365955 105368704 + Acp6 protein_coding retained_intron MGP_CBAJ_T0062254.1 MGP_CBAJ_G0027317.1 mouse_genomes_project 3 105367447 105371324 + Acp6 protein_coding retained_intron MGP_CBAJ_T0062255.1 MGP_CBAJ_G0027317.1 mouse_genomes_project 3 105368814 105372105 + Acp6 protein_coding retained_intron MGP_CBAJ_T0062114.1 MGP_CBAJ_G0027280.1 mouse_genomes_project 3 103890973 103900512 + MGP_CBAJ_P0062114 Aph1a protein_coding protein_coding MGP_CBAJ_T0062115.1 MGP_CBAJ_G0027280.1 mouse_genomes_project 3 103891037 103891996 + MGP_CBAJ_P0062115 Aph1a protein_coding protein_coding MGP_CBAJ_T0062116.1 MGP_CBAJ_G0027280.1 mouse_genomes_project 3 103891059 103899669 + MGP_CBAJ_P0062116 Aph1a protein_coding protein_coding MGP_CBAJ_T0062117.1 MGP_CBAJ_G0027280.1 mouse_genomes_project 3 103891175 103897397 + MGP_CBAJ_P0062117 Aph1a protein_coding unknown_likely_coding MGP_CBAJ_T0062118.1 MGP_CBAJ_G0027280.1 mouse_genomes_project 3 103891175 103897784 + MGP_CBAJ_P0062118 Aph1a protein_coding unknown_likely_coding MGP_CBAJ_T0062119.1 MGP_CBAJ_G0027280.1 mouse_genomes_project 3 103891469 103900056 + Aph1a protein_coding retained_intron MGP_CBAJ_T0062005.1 MGP_CBAJ_G0027263.1 mouse_genomes_project 3 103217266 103226978 + MGP_CBAJ_P0062005 Cers2 protein_coding protein_coding MGP_CBAJ_T0062006.1 MGP_CBAJ_G0027263.1 mouse_genomes_project 3 103217559 103228697 + MGP_CBAJ_P0062006 Cers2 protein_coding protein_coding MGP_CBAJ_T0062007.1 MGP_CBAJ_G0027263.1 mouse_genomes_project 3 103217722 103225871 + Cers2 protein_coding retained_intron MGP_CBAJ_T0062008.1 MGP_CBAJ_G0027263.1 mouse_genomes_project 3 103217742 103226421 + Cers2 protein_coding retained_intron MGP_CBAJ_T0062009.1 MGP_CBAJ_G0027263.1 mouse_genomes_project 3 103222447 103225648 + Cers2 protein_coding retained_intron MGP_CBAJ_T0062010.1 MGP_CBAJ_G0027263.1 mouse_genomes_project 3 103223118 103226140 + MGP_CBAJ_P0062010 Cers2 protein_coding protein_coding MGP_CBAJ_T0062011.1 MGP_CBAJ_G0027263.1 mouse_genomes_project 3 103223889 103227053 + MGP_CBAJ_P0062011 Cers2 protein_coding protein_coding MGP_CBAJ_T0062012.1 MGP_CBAJ_G0027263.1 mouse_genomes_project 3 103225230 103227770 + Cers2 protein_coding retained_intron MGP_CBAJ_T0062013.1 MGP_CBAJ_G0027263.1 mouse_genomes_project 3 103226037 103227055 + Cers2 protein_coding retained_intron MGP_CBAJ_T0062488.1 MGP_CBAJ_G0027371.1 mouse_genomes_project 3 112558656 112561051 - MGP_CBAJ_P0062488 protein_coding protein_coding MGP_CBAJ_T0013930.1 MGP_CBAJ_G0012042.1 mouse_genomes_project 3 76626807 76627026 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007560.1 MGP_CBAJ_G0006177.1 mouse_genomes_project 3 117669640 117689009 + Gm12524 lincRNA lincRNA MGP_CBAJ_T0004121.1 MGP_CBAJ_G0003632.1 mouse_genomes_project 3 2131787 2181093 - 2700069I18Rik antisense antisense MGP_CBAJ_T0004122.1 MGP_CBAJ_G0003632.1 mouse_genomes_project 3 2133181 2181111 - 2700069I18Rik antisense antisense MGP_CBAJ_T0013986.1 MGP_CBAJ_G0012098.1 mouse_genomes_project 3 100536069 100536202 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062330.1 MGP_CBAJ_G0027340.1 mouse_genomes_project 3 108356204 108429274 + Spag17 protein_coding processed_transcript MGP_CBAJ_T0062331.1 MGP_CBAJ_G0027340.1 mouse_genomes_project 3 108356215 108603435 + MGP_CBAJ_P0062331 Spag17 protein_coding protein_coding MGP_CBAJ_T0062332.1 MGP_CBAJ_G0027340.1 mouse_genomes_project 3 108491283 108496212 + Spag17 protein_coding retained_intron MGP_CBAJ_T0062333.1 MGP_CBAJ_G0027340.1 mouse_genomes_project 3 108496155 108507458 + Spag17 protein_coding retained_intron MGP_CBAJ_T0062752.1 MGP_CBAJ_G0027437.1 mouse_genomes_project 3 117438612 117446496 - MGP_CBAJ_P0062752 Gstm3 protein_coding protein_coding MGP_CBAJ_T0062753.1 MGP_CBAJ_G0027437.1 mouse_genomes_project 3 117439123 117446353 - MGP_CBAJ_P0062753 Gstm3 protein_coding unknown_likely_coding MGP_CBAJ_T0060331.1 MGP_CBAJ_G0026883.1 mouse_genomes_project 3 51718781 51732740 - MGP_CBAJ_P0060331 Pcdh18 protein_coding protein_coding MGP_CBAJ_T0060332.1 MGP_CBAJ_G0026883.1 mouse_genomes_project 3 51718783 51732709 - MGP_CBAJ_P0060332 Pcdh18 protein_coding protein_coding MGP_CBAJ_T0060333.1 MGP_CBAJ_G0026883.1 mouse_genomes_project 3 51720763 51732749 - Pcdh18 protein_coding processed_transcript MGP_CBAJ_T0060334.1 MGP_CBAJ_G0026883.1 mouse_genomes_project 3 51727840 51730889 - MGP_CBAJ_P0060334 Pcdh18 protein_coding protein_coding MGP_CBAJ_T0060335.1 MGP_CBAJ_G0026883.1 mouse_genomes_project 3 51730250 51732707 - Pcdh18 protein_coding processed_transcript MGP_CBAJ_T0010372.1 MGP_CBAJ_G0008510.1 mouse_genomes_project 3 16253970 16254079 + Mir124a-2 miRNA miRNA MGP_CBAJ_T0064010.1 MGP_CBAJ_G0027675.1 mouse_genomes_project 3 168897577 168902590 - MGP_CBAJ_P0064010 Rabggtb protein_coding nonsense_mediated_decay MGP_CBAJ_T0064011.1 MGP_CBAJ_G0027675.1 mouse_genomes_project 3 168897579 168902424 - MGP_CBAJ_P0064011 Rabggtb protein_coding protein_coding MGP_CBAJ_T0064012.1 MGP_CBAJ_G0027675.1 mouse_genomes_project 3 168897579 168903288 - MGP_CBAJ_P0064012 Rabggtb protein_coding protein_coding MGP_CBAJ_T0064013.1 MGP_CBAJ_G0027675.1 mouse_genomes_project 3 168897581 168903206 - MGP_CBAJ_P0064013 Rabggtb protein_coding nonsense_mediated_decay MGP_CBAJ_T0064014.1 MGP_CBAJ_G0027675.1 mouse_genomes_project 3 168897583 168903272 - MGP_CBAJ_P0064014 Rabggtb protein_coding nonsense_mediated_decay MGP_CBAJ_T0064015.1 MGP_CBAJ_G0027675.1 mouse_genomes_project 3 168897744 168902360 - MGP_CBAJ_P0064015 Rabggtb protein_coding nonsense_mediated_decay MGP_CBAJ_T0064016.1 MGP_CBAJ_G0027675.1 mouse_genomes_project 3 168897862 168902360 - MGP_CBAJ_P0064016 Rabggtb protein_coding nonsense_mediated_decay MGP_CBAJ_T0064017.1 MGP_CBAJ_G0027675.1 mouse_genomes_project 3 168897862 168902360 - MGP_CBAJ_P0064017 Rabggtb protein_coding nonsense_mediated_decay MGP_CBAJ_T0064018.1 MGP_CBAJ_G0027675.1 mouse_genomes_project 3 168897862 168902360 - MGP_CBAJ_P0064018 Rabggtb protein_coding nonsense_mediated_decay MGP_CBAJ_T0064019.1 MGP_CBAJ_G0027675.1 mouse_genomes_project 3 168898361 168902312 - MGP_CBAJ_P0064019 Rabggtb protein_coding nonsense_mediated_decay MGP_CBAJ_T0064020.1 MGP_CBAJ_G0027675.1 mouse_genomes_project 3 168899698 168903234 - MGP_CBAJ_P0064020 Rabggtb protein_coding nonsense_mediated_decay MGP_CBAJ_T0064021.1 MGP_CBAJ_G0027675.1 mouse_genomes_project 3 168902264 168903210 - Rabggtb protein_coding processed_transcript MGP_CBAJ_T0017763.1 MGP_CBAJ_G0015272.1 mouse_genomes_project 3 163287593 163289540 + Gm43572 processed_transcript processed_transcript MGP_CBAJ_T0097811.1 MGP_CBAJ_G0036084.1 mouse_genomes_project 3 168747398 168747480 + pseudogene pseudogene MGP_CBAJ_T0062935.1 MGP_CBAJ_G0027477.1 mouse_genomes_project 3 124197045 124416940 + MGP_CBAJ_P0062935 Col11a1 protein_coding protein_coding MGP_CBAJ_T0062936.1 MGP_CBAJ_G0027477.1 mouse_genomes_project 3 124197045 124295392 + MGP_CBAJ_P0062936 Col11a1 protein_coding protein_coding MGP_CBAJ_T0062937.1 MGP_CBAJ_G0027477.1 mouse_genomes_project 3 124197139 124199650 + Col11a1 protein_coding retained_intron MGP_CBAJ_T0062938.1 MGP_CBAJ_G0027477.1 mouse_genomes_project 3 124197404 124354220 + MGP_CBAJ_P0062938 Col11a1 protein_coding unknown_likely_coding MGP_CBAJ_T0062939.1 MGP_CBAJ_G0027477.1 mouse_genomes_project 3 124237630 124238598 + Col11a1 protein_coding retained_intron MGP_CBAJ_T0062940.1 MGP_CBAJ_G0027477.1 mouse_genomes_project 3 124333927 124342656 + Col11a1 protein_coding retained_intron MGP_CBAJ_T0062941.1 MGP_CBAJ_G0027477.1 mouse_genomes_project 3 124353993 124415537 + MGP_CBAJ_P0062941 Col11a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061766.1 MGP_CBAJ_G0027202.1 mouse_genomes_project 3 100066901 100068437 - MGP_CBAJ_P0061766 Gm38119 protein_coding protein_coding MGP_CBAJ_T0060225.1 MGP_CBAJ_G0026867.1 mouse_genomes_project 3 39039956 39077228 - MGP_CBAJ_P0060225 protein_coding protein_coding MGP_CBAJ_T0060226.1 MGP_CBAJ_G0026867.1 mouse_genomes_project 3 39040349 39075477 - MGP_CBAJ_P0060226 protein_coding protein_coding MGP_CBAJ_T0060227.1 MGP_CBAJ_G0026867.1 mouse_genomes_project 3 39042779 39046255 - MGP_CBAJ_P0060227 protein_coding protein_coding MGP_CBAJ_T0060228.1 MGP_CBAJ_G0026867.1 mouse_genomes_project 3 39075636 39077199 - protein_coding processed_transcript MGP_CBAJ_T0063178.1 MGP_CBAJ_G0027524.1 mouse_genomes_project 3 134513040 134624279 + MGP_CBAJ_P0063178 Sec24d protein_coding protein_coding MGP_CBAJ_T0063179.1 MGP_CBAJ_G0027524.1 mouse_genomes_project 3 134513064 134524829 + Sec24d protein_coding retained_intron MGP_CBAJ_T0063180.1 MGP_CBAJ_G0027524.1 mouse_genomes_project 3 134513075 134519995 + MGP_CBAJ_P0063180 Sec24d protein_coding protein_coding MGP_CBAJ_T0063181.1 MGP_CBAJ_G0027524.1 mouse_genomes_project 3 134535904 134624274 + Sec24d protein_coding retained_intron MGP_CBAJ_T0063182.1 MGP_CBAJ_G0027524.1 mouse_genomes_project 3 134590250 134592191 + Sec24d protein_coding retained_intron MGP_CBAJ_T0063183.1 MGP_CBAJ_G0027524.1 mouse_genomes_project 3 134592720 134608621 + Sec24d protein_coding processed_transcript MGP_CBAJ_T0063184.1 MGP_CBAJ_G0027524.1 mouse_genomes_project 3 134613543 134614601 + Sec24d protein_coding retained_intron MGP_CBAJ_T0063185.1 MGP_CBAJ_G0027524.1 mouse_genomes_project 3 134623351 134624274 + Sec24d protein_coding retained_intron MGP_CBAJ_T0062268.1 MGP_CBAJ_G0027321.1 mouse_genomes_project 3 105892646 105921164 + MGP_CBAJ_P0062268 Fmo5 protein_coding protein_coding MGP_CBAJ_T0062269.1 MGP_CBAJ_G0027321.1 mouse_genomes_project 3 105892680 105918436 + MGP_CBAJ_P0062269 Fmo5 protein_coding protein_coding MGP_CBAJ_T0062270.1 MGP_CBAJ_G0027321.1 mouse_genomes_project 3 105892690 105893785 + Fmo5 protein_coding retained_intron MGP_CBAJ_T0062271.1 MGP_CBAJ_G0027321.1 mouse_genomes_project 3 105892699 105918486 + MGP_CBAJ_P0062271 Fmo5 protein_coding protein_coding MGP_CBAJ_T0062272.1 MGP_CBAJ_G0027321.1 mouse_genomes_project 3 105892725 105902855 + Fmo5 protein_coding processed_transcript MGP_CBAJ_T0061495.1 MGP_CBAJ_G0027126.1 mouse_genomes_project 3 96188837 96199716 - MGP_CBAJ_P0061495 Flad1 protein_coding protein_coding MGP_CBAJ_T0061496.1 MGP_CBAJ_G0027126.1 mouse_genomes_project 3 96189802 96199709 - MGP_CBAJ_P0061496 Flad1 protein_coding protein_coding MGP_CBAJ_T0061497.1 MGP_CBAJ_G0027126.1 mouse_genomes_project 3 96190500 96199715 - MGP_CBAJ_P0061497 Flad1 protein_coding protein_coding MGP_CBAJ_T0061498.1 MGP_CBAJ_G0027126.1 mouse_genomes_project 3 96196575 96199627 - MGP_CBAJ_P0061498 Flad1 protein_coding protein_coding MGP_CBAJ_T0061499.1 MGP_CBAJ_G0027126.1 mouse_genomes_project 3 96196800 96199716 - MGP_CBAJ_P0061499 Flad1 protein_coding protein_coding MGP_CBAJ_T0063307.1 MGP_CBAJ_G0027543.1 mouse_genomes_project 3 139656763 139686968 - MGP_CBAJ_P0063307 5730508B09Rik protein_coding protein_coding MGP_CBAJ_T0063308.1 MGP_CBAJ_G0027543.1 mouse_genomes_project 3 139657385 139686932 - MGP_CBAJ_P0063308 5730508B09Rik protein_coding protein_coding MGP_CBAJ_T0007451.1 MGP_CBAJ_G0006096.1 mouse_genomes_project 3 60429517 60444643 - Gm26671 lincRNA lincRNA MGP_CBAJ_T0007452.1 MGP_CBAJ_G0006096.1 mouse_genomes_project 3 60439804 60444704 - Gm26671 lincRNA lincRNA MGP_CBAJ_T0007453.1 MGP_CBAJ_G0006096.1 mouse_genomes_project 3 60440158 60444674 - Gm26671 lincRNA lincRNA MGP_CBAJ_T0007454.1 MGP_CBAJ_G0006096.1 mouse_genomes_project 3 60441723 60444710 - Gm26671 lincRNA lincRNA MGP_CBAJ_T0014038.1 MGP_CBAJ_G0012150.1 mouse_genomes_project 3 112833883 112834347 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013724.1 MGP_CBAJ_G0011836.1 mouse_genomes_project 3 6499611 6500056 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061721.1 MGP_CBAJ_G0027167.1 mouse_genomes_project 3 97555793 97557326 + MGP_CBAJ_P0061721 S100a6 protein_coding protein_coding MGP_CBAJ_T0061722.1 MGP_CBAJ_G0027167.1 mouse_genomes_project 3 97556065 97556919 + S100a6 protein_coding retained_intron MGP_CBAJ_T0061723.1 MGP_CBAJ_G0027167.1 mouse_genomes_project 3 97556216 97557326 + MGP_CBAJ_P0061723 S100a6 protein_coding protein_coding MGP_CBAJ_T0061724.1 MGP_CBAJ_G0027167.1 mouse_genomes_project 3 97556671 97569348 + MGP_CBAJ_P0061724 S100a6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0001206.1 MGP_CBAJ_G0001133.1 mouse_genomes_project 3 80549088 80555458 + TEC TEC MGP_CBAJ_T0013750.1 MGP_CBAJ_G0011862.1 mouse_genomes_project 3 14214713 14215774 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007496.1 MGP_CBAJ_G0006131.1 mouse_genomes_project 3 91509602 91545081 - Gm42813 lincRNA lincRNA MGP_CBAJ_T0059805.1 MGP_CBAJ_G0026791.1 mouse_genomes_project 3 18851334 18884602 - MGP_CBAJ_P0059805 Gyg protein_coding protein_coding MGP_CBAJ_T0059806.1 MGP_CBAJ_G0026791.1 mouse_genomes_project 3 18851337 18884381 - MGP_CBAJ_P0059806 Gyg protein_coding protein_coding MGP_CBAJ_T0059807.1 MGP_CBAJ_G0026791.1 mouse_genomes_project 3 18851397 18884354 - MGP_CBAJ_P0059807 Gyg protein_coding protein_coding MGP_CBAJ_T0059808.1 MGP_CBAJ_G0026791.1 mouse_genomes_project 3 18851806 18852794 - Gyg protein_coding retained_intron MGP_CBAJ_T0099156.1 MGP_CBAJ_G0037411.1 mouse_genomes_project 3 40389576 40389736 + Gm23796 snRNA snRNA MGP_CBAJ_T0004202.1 MGP_CBAJ_G0003690.1 mouse_genomes_project 3 96783912 96785050 + Gm42809 antisense antisense MGP_CBAJ_T0014130.1 MGP_CBAJ_G0012242.1 mouse_genomes_project 3 147510266 147510719 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007549.1 MGP_CBAJ_G0006169.1 mouse_genomes_project 3 113326184 113342163 - Gm5546 lincRNA lincRNA MGP_CBAJ_T0062515.1 MGP_CBAJ_G0027378.1 mouse_genomes_project 3 112762051 112768089 + MGP_CBAJ_P0062515 Bcl2l15 protein_coding protein_coding MGP_CBAJ_T0062516.1 MGP_CBAJ_G0027378.1 mouse_genomes_project 3 112762221 112785914 + MGP_CBAJ_P0062516 Bcl2l15 protein_coding protein_coding MGP_CBAJ_T0062517.1 MGP_CBAJ_G0027378.1 mouse_genomes_project 3 112762282 112775815 + MGP_CBAJ_P0062517 Bcl2l15 protein_coding unknown_likely_coding MGP_CBAJ_T0062518.1 MGP_CBAJ_G0027378.1 mouse_genomes_project 3 112777513 112785122 + Bcl2l15 protein_coding processed_transcript MGP_CBAJ_T0062519.1 MGP_CBAJ_G0027378.1 mouse_genomes_project 3 112783258 112784955 + Bcl2l15 protein_coding processed_transcript MGP_CBAJ_T0001091.1 MGP_CBAJ_G0001020.1 mouse_genomes_project 3 29921925 29924038 - TEC TEC MGP_CBAJ_T0061672.1 MGP_CBAJ_G0027154.1 mouse_genomes_project 3 97390288 97409277 - MGP_CBAJ_P0061672 Npr1 protein_coding protein_coding MGP_CBAJ_T0061673.1 MGP_CBAJ_G0027154.1 mouse_genomes_project 3 97390407 97391479 - Npr1 protein_coding retained_intron MGP_CBAJ_T0061674.1 MGP_CBAJ_G0027154.1 mouse_genomes_project 3 97394804 97400888 - Npr1 protein_coding processed_transcript MGP_CBAJ_T0061675.1 MGP_CBAJ_G0027154.1 mouse_genomes_project 3 97400810 97402351 - Npr1 protein_coding retained_intron MGP_CBAJ_T0061676.1 MGP_CBAJ_G0027154.1 mouse_genomes_project 3 97400829 97404833 - MGP_CBAJ_P0061676 Npr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0004196.1 MGP_CBAJ_G0003687.1 mouse_genomes_project 3 96091473 96094943 + Gm15998 antisense antisense MGP_CBAJ_T0013815.1 MGP_CBAJ_G0011927.1 mouse_genomes_project 3 39029656 39030489 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062299.1 MGP_CBAJ_G0027329.1 mouse_genomes_project 3 106621123 106655424 + MGP_CBAJ_P0062299 Hmgcs2 protein_coding protein_coding MGP_CBAJ_T0062300.1 MGP_CBAJ_G0027329.1 mouse_genomes_project 3 106621123 106655430 + MGP_CBAJ_P0062300 Hmgcs2 protein_coding protein_coding MGP_CBAJ_T0099219.1 MGP_CBAJ_G0037474.1 mouse_genomes_project 3 144265364 144265471 - Gm22421 snRNA snRNA MGP_CBAJ_T0013708.1 MGP_CBAJ_G0011820.1 mouse_genomes_project 3 1540500 1540620 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0062821.1 MGP_CBAJ_G0027454.1 mouse_genomes_project 3 117969559 117989853 - MGP_CBAJ_P0062821 Sars protein_coding protein_coding MGP_CBAJ_T0062822.1 MGP_CBAJ_G0027454.1 mouse_genomes_project 3 117971306 117989824 - MGP_CBAJ_P0062822 Sars protein_coding protein_coding MGP_CBAJ_T0062823.1 MGP_CBAJ_G0027454.1 mouse_genomes_project 3 117972925 117989798 - MGP_CBAJ_P0062823 Sars protein_coding protein_coding MGP_CBAJ_T0062824.1 MGP_CBAJ_G0027454.1 mouse_genomes_project 3 117974044 117989864 - MGP_CBAJ_P0062824 Sars protein_coding protein_coding MGP_CBAJ_T0062825.1 MGP_CBAJ_G0027454.1 mouse_genomes_project 3 117979081 117989811 - Sars protein_coding retained_intron MGP_CBAJ_T0062923.1 MGP_CBAJ_G0027475.1 mouse_genomes_project 3 123671895 123686692 - MGP_CBAJ_P0062923 protein_coding unknown_likely_coding MGP_CBAJ_T0062924.1 MGP_CBAJ_G0027475.1 mouse_genomes_project 3 123672060 123677935 - protein_coding retained_intron MGP_CBAJ_T0062925.1 MGP_CBAJ_G0027475.1 mouse_genomes_project 3 123678606 123694089 - MGP_CBAJ_P0062925 protein_coding protein_coding MGP_CBAJ_T0062926.1 MGP_CBAJ_G0027475.1 mouse_genomes_project 3 123680903 123731477 - MGP_CBAJ_P0062926 protein_coding protein_coding MGP_CBAJ_T0060958.1 MGP_CBAJ_G0027025.1 mouse_genomes_project 3 88888105 88897881 - MGP_CBAJ_P0060958 Fgb protein_coding protein_coding MGP_CBAJ_T0060931.1 MGP_CBAJ_G0027017.1 mouse_genomes_project 3 87776961 87819474 - MGP_CBAJ_P0060931 Gucy1b3 protein_coding protein_coding MGP_CBAJ_T0060932.1 MGP_CBAJ_G0027017.1 mouse_genomes_project 3 87779282 87780294 - Gucy1b3 protein_coding retained_intron MGP_CBAJ_T0060933.1 MGP_CBAJ_G0027017.1 mouse_genomes_project 3 87795958 87819573 - Gucy1b3 protein_coding processed_transcript MGP_CBAJ_T0014036.1 MGP_CBAJ_G0012148.1 mouse_genomes_project 3 112101485 112101774 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097810.1 MGP_CBAJ_G0036083.1 mouse_genomes_project 3 96129645 96130915 + pseudogene pseudogene MGP_CBAJ_T0001222.1 MGP_CBAJ_G0001149.1 mouse_genomes_project 3 97250334 97255832 + TEC TEC MGP_CBAJ_T0098201.1 MGP_CBAJ_G0036474.1 mouse_genomes_project 3 73050685 73051034 - Gm22009 scaRNA scaRNA MGP_CBAJ_T0013968.1 MGP_CBAJ_G0012080.1 mouse_genomes_project 3 93405686 93405995 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007647.1 MGP_CBAJ_G0006249.1 mouse_genomes_project 3 157458337 157535943 - Gm42707 lincRNA lincRNA MGP_CBAJ_T0007649.1 MGP_CBAJ_G0006249.1 mouse_genomes_project 3 157488510 157535567 - Gm42707 lincRNA lincRNA MGP_CBAJ_T0013932.1 MGP_CBAJ_G0012044.1 mouse_genomes_project 3 78627412 78628489 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099180.1 MGP_CBAJ_G0037435.1 mouse_genomes_project 3 85305829 85305932 + Gm26420 snRNA snRNA MGP_CBAJ_T0014055.1 MGP_CBAJ_G0012167.1 mouse_genomes_project 3 117995791 117996170 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013857.1 MGP_CBAJ_G0011969.1 mouse_genomes_project 3 54626826 54627067 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0062334.1 MGP_CBAJ_G0027341.1 mouse_genomes_project 3 108598292 108622829 - MGP_CBAJ_P0062334 Wdr3 protein_coding protein_coding MGP_CBAJ_T0062335.1 MGP_CBAJ_G0027341.1 mouse_genomes_project 3 108598847 108601734 - Wdr3 protein_coding retained_intron MGP_CBAJ_T0062336.1 MGP_CBAJ_G0027341.1 mouse_genomes_project 3 108602611 108622829 - Wdr3 protein_coding retained_intron MGP_CBAJ_T0062337.1 MGP_CBAJ_G0027341.1 mouse_genomes_project 3 108602613 108603695 - Wdr3 protein_coding retained_intron MGP_CBAJ_T0062338.1 MGP_CBAJ_G0027341.1 mouse_genomes_project 3 108617484 108622819 - MGP_CBAJ_P0062338 Wdr3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062339.1 MGP_CBAJ_G0027341.1 mouse_genomes_project 3 108617484 108622754 - MGP_CBAJ_P0062339 Wdr3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062969.1 MGP_CBAJ_G0027485.1 mouse_genomes_project 3 126677248 126857694 - MGP_CBAJ_P0062969 Cdc14a protein_coding protein_coding MGP_CBAJ_T0062970.1 MGP_CBAJ_G0027485.1 mouse_genomes_project 3 126677248 126857648 - MGP_CBAJ_P0062970 Cdc14a protein_coding protein_coding MGP_CBAJ_T0062971.1 MGP_CBAJ_G0027485.1 mouse_genomes_project 3 126737893 126856311 - MGP_CBAJ_P0062971 Cdc14a protein_coding nonsense_mediated_decay MGP_CBAJ_T0062972.1 MGP_CBAJ_G0027485.1 mouse_genomes_project 3 126745463 126857694 - Cdc14a protein_coding retained_intron MGP_CBAJ_T0062973.1 MGP_CBAJ_G0027485.1 mouse_genomes_project 3 126833882 126856686 - Cdc14a protein_coding retained_intron MGP_CBAJ_T0062974.1 MGP_CBAJ_G0027485.1 mouse_genomes_project 3 126837084 126839186 - Cdc14a protein_coding retained_intron MGP_CBAJ_T0062975.1 MGP_CBAJ_G0027485.1 mouse_genomes_project 3 126837805 126857557 - Cdc14a protein_coding processed_transcript MGP_CBAJ_T0004249.1 MGP_CBAJ_G0003721.1 mouse_genomes_project 3 117341253 117351913 - 4933431E20Rik antisense antisense MGP_CBAJ_T0004250.1 MGP_CBAJ_G0003721.1 mouse_genomes_project 3 117345732 117351466 - 4933431E20Rik antisense antisense MGP_CBAJ_T0004251.1 MGP_CBAJ_G0003721.1 mouse_genomes_project 3 117347170 117351498 - 4933431E20Rik antisense antisense MGP_CBAJ_T0004252.1 MGP_CBAJ_G0003721.1 mouse_genomes_project 3 117348563 117351392 - 4933431E20Rik antisense antisense MGP_CBAJ_T0004253.1 MGP_CBAJ_G0003721.1 mouse_genomes_project 3 117348594 117351473 - 4933431E20Rik antisense antisense MGP_CBAJ_T0004254.1 MGP_CBAJ_G0003721.1 mouse_genomes_project 3 117348823 117351509 - 4933431E20Rik antisense antisense MGP_CBAJ_T0004255.1 MGP_CBAJ_G0003721.1 mouse_genomes_project 3 117348922 117351474 - 4933431E20Rik antisense antisense MGP_CBAJ_T0004256.1 MGP_CBAJ_G0003721.1 mouse_genomes_project 3 117348966 117351483 - 4933431E20Rik antisense antisense MGP_CBAJ_T0004257.1 MGP_CBAJ_G0003721.1 mouse_genomes_project 3 117349118 117351489 - 4933431E20Rik antisense antisense MGP_CBAJ_T0004258.1 MGP_CBAJ_G0003721.1 mouse_genomes_project 3 117349172 117351500 - 4933431E20Rik antisense antisense MGP_CBAJ_T0004259.1 MGP_CBAJ_G0003721.1 mouse_genomes_project 3 117349202 117351463 - 4933431E20Rik antisense antisense MGP_CBAJ_T0004260.1 MGP_CBAJ_G0003721.1 mouse_genomes_project 3 117349828 117351512 - 4933431E20Rik antisense antisense MGP_CBAJ_T0009347.1 MGP_CBAJ_G0007485.1 mouse_genomes_project 3 158783472 158802663 + macro_lncRNA macro_lncRNA MGP_CBAJ_T0010391.1 MGP_CBAJ_G0008529.1 mouse_genomes_project 3 69303939 69304078 + Mir8120 miRNA miRNA MGP_CBAJ_T0062681.1 MGP_CBAJ_G0027415.1 mouse_genomes_project 3 116135848 116136875 - MGP_CBAJ_P0062681 Olfr266 protein_coding protein_coding MGP_CBAJ_T0061011.1 MGP_CBAJ_G0027038.1 mouse_genomes_project 3 90708974 90754940 + MGP_CBAJ_P0061011 Tmem154 protein_coding protein_coding MGP_CBAJ_T0061012.1 MGP_CBAJ_G0027038.1 mouse_genomes_project 3 90708992 90732122 + Tmem154 protein_coding retained_intron MGP_CBAJ_T0061013.1 MGP_CBAJ_G0027038.1 mouse_genomes_project 3 90709152 90732012 + Tmem154 protein_coding processed_transcript MGP_CBAJ_T0061014.1 MGP_CBAJ_G0027038.1 mouse_genomes_project 3 90736673 90738994 + Tmem154 protein_coding retained_intron MGP_CBAJ_T0013905.1 MGP_CBAJ_G0012017.1 mouse_genomes_project 3 70615657 70616446 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0064129.1 MGP_CBAJ_G0027692.1 mouse_genomes_project 3 173505982 173788903 - MGP_CBAJ_P0064129 Lrrc7 protein_coding protein_coding MGP_CBAJ_T0064130.1 MGP_CBAJ_G0027692.1 mouse_genomes_project 3 173505986 174022726 - MGP_CBAJ_P0064130 Lrrc7 protein_coding protein_coding MGP_CBAJ_T0064131.1 MGP_CBAJ_G0027692.1 mouse_genomes_project 3 173507530 173793012 - MGP_CBAJ_P0064131 Lrrc7 protein_coding protein_coding MGP_CBAJ_T0064132.1 MGP_CBAJ_G0027692.1 mouse_genomes_project 3 173507530 174022726 - MGP_CBAJ_P0064132 Lrrc7 protein_coding protein_coding MGP_CBAJ_T0064133.1 MGP_CBAJ_G0027692.1 mouse_genomes_project 3 173853349 174021850 - Lrrc7 protein_coding retained_intron MGP_CBAJ_T0004183.1 MGP_CBAJ_G0003678.1 mouse_genomes_project 3 86674047 86677064 - Gm16000 antisense antisense MGP_CBAJ_T0062802.1 MGP_CBAJ_G0027451.1 mouse_genomes_project 3 117888345 117908007 + MGP_CBAJ_P0062802 Mybphl protein_coding protein_coding MGP_CBAJ_T0001352.1 MGP_CBAJ_G0001278.1 mouse_genomes_project 3 171956672 171959240 + TEC TEC MGP_CBAJ_T0013835.1 MGP_CBAJ_G0011947.1 mouse_genomes_project 3 47078066 47078325 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001328.1 MGP_CBAJ_G0001254.1 mouse_genomes_project 3 150747589 150749931 + TEC TEC MGP_CBAJ_T0100437.1 MGP_CBAJ_G0038692.1 mouse_genomes_project 3 33447372 33447515 - Gm24780 snoRNA snoRNA MGP_CBAJ_T0014158.1 MGP_CBAJ_G0012270.1 mouse_genomes_project 3 153862011 153862264 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060571.1 MGP_CBAJ_G0026932.1 mouse_genomes_project 3 61814282 61852468 - MGP_CBAJ_P0060571 Clrn1 protein_coding protein_coding MGP_CBAJ_T0060572.1 MGP_CBAJ_G0026932.1 mouse_genomes_project 3 61815469 61852468 - MGP_CBAJ_P0060572 Clrn1 protein_coding protein_coding MGP_CBAJ_T0060573.1 MGP_CBAJ_G0026932.1 mouse_genomes_project 3 61816235 61852596 - MGP_CBAJ_P0060573 Clrn1 protein_coding protein_coding MGP_CBAJ_T0060574.1 MGP_CBAJ_G0026932.1 mouse_genomes_project 3 61816617 61831030 - Clrn1 protein_coding retained_intron MGP_CBAJ_T0063477.1 MGP_CBAJ_G0027577.1 mouse_genomes_project 3 147342869 147458593 + MGP_CBAJ_P0063477 Tacr3 protein_coding protein_coding MGP_CBAJ_T0098338.1 MGP_CBAJ_G0036604.1 mouse_genomes_project 3 110006597 110007673 + Gm42938 sense_intronic sense_intronic MGP_CBAJ_T0061145.1 MGP_CBAJ_G0027066.1 mouse_genomes_project 3 94392272 94402548 + MGP_CBAJ_P0061145 Isg20l2 protein_coding protein_coding MGP_CBAJ_T0007612.1 MGP_CBAJ_G0006219.1 mouse_genomes_project 3 146637709 146648549 + Gm43194 lincRNA lincRNA MGP_CBAJ_T0007613.1 MGP_CBAJ_G0006219.1 mouse_genomes_project 3 146637847 146650046 + Gm43194 lincRNA lincRNA MGP_CBAJ_T0061439.1 MGP_CBAJ_G0027114.1 mouse_genomes_project 3 96000608 96011498 - MGP_CBAJ_P0061439 Trim46 protein_coding protein_coding MGP_CBAJ_T0061440.1 MGP_CBAJ_G0027114.1 mouse_genomes_project 3 96000608 96012249 - MGP_CBAJ_P0061440 Trim46 protein_coding protein_coding MGP_CBAJ_T0061441.1 MGP_CBAJ_G0027114.1 mouse_genomes_project 3 96000608 96011684 - MGP_CBAJ_P0061441 Trim46 protein_coding protein_coding MGP_CBAJ_T0061442.1 MGP_CBAJ_G0027114.1 mouse_genomes_project 3 96001266 96005774 - Trim46 protein_coding processed_transcript MGP_CBAJ_T0061443.1 MGP_CBAJ_G0027114.1 mouse_genomes_project 3 96001299 96012224 - MGP_CBAJ_P0061443 Trim46 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061444.1 MGP_CBAJ_G0027114.1 mouse_genomes_project 3 96010778 96012661 - MGP_CBAJ_P0061444 Trim46 protein_coding protein_coding MGP_CBAJ_T0062199.1 MGP_CBAJ_G0027306.1 mouse_genomes_project 3 104792188 104811610 + MGP_CBAJ_P0062199 Itga10 protein_coding protein_coding MGP_CBAJ_T0062200.1 MGP_CBAJ_G0027306.1 mouse_genomes_project 3 104792188 104811604 + MGP_CBAJ_P0062200 Itga10 protein_coding protein_coding MGP_CBAJ_T0062201.1 MGP_CBAJ_G0027306.1 mouse_genomes_project 3 104804283 104809919 + Itga10 protein_coding retained_intron MGP_CBAJ_T0063286.1 MGP_CBAJ_G0027540.1 mouse_genomes_project 3 139434889 139554820 - MGP_CBAJ_P0063286 Alpk1 protein_coding protein_coding MGP_CBAJ_T0063287.1 MGP_CBAJ_G0027540.1 mouse_genomes_project 3 139434889 139513794 - MGP_CBAJ_P0063287 Alpk1 protein_coding protein_coding MGP_CBAJ_T0063288.1 MGP_CBAJ_G0027540.1 mouse_genomes_project 3 139434978 139554820 - Alpk1 protein_coding retained_intron MGP_CBAJ_T0063289.1 MGP_CBAJ_G0027540.1 mouse_genomes_project 3 139444950 139453479 - MGP_CBAJ_P0063289 Alpk1 protein_coding protein_coding MGP_CBAJ_T0063290.1 MGP_CBAJ_G0027540.1 mouse_genomes_project 3 139508583 139554806 - Alpk1 protein_coding retained_intron MGP_CBAJ_T0063291.1 MGP_CBAJ_G0027540.1 mouse_genomes_project 3 139536432 139554783 - Alpk1 protein_coding processed_transcript MGP_CBAJ_T0061982.1 MGP_CBAJ_G0027259.1 mouse_genomes_project 3 103124196 103138313 - MGP_CBAJ_P0061982 Bnipl protein_coding protein_coding MGP_CBAJ_T0061983.1 MGP_CBAJ_G0027259.1 mouse_genomes_project 3 103124220 103138169 - MGP_CBAJ_P0061983 Bnipl protein_coding protein_coding MGP_CBAJ_T0061984.1 MGP_CBAJ_G0027259.1 mouse_genomes_project 3 103124750 103138256 - MGP_CBAJ_P0061984 Bnipl protein_coding protein_coding MGP_CBAJ_T0061985.1 MGP_CBAJ_G0027259.1 mouse_genomes_project 3 103130103 103138268 - MGP_CBAJ_P0061985 Bnipl protein_coding protein_coding MGP_CBAJ_T0061986.1 MGP_CBAJ_G0027259.1 mouse_genomes_project 3 103132258 103135699 - Bnipl protein_coding retained_intron MGP_CBAJ_T0061880.1 MGP_CBAJ_G0027243.1 mouse_genomes_project 3 102780552 102785971 + MGP_CBAJ_P0061880 Rfx5 protein_coding protein_coding MGP_CBAJ_T0061881.1 MGP_CBAJ_G0027243.1 mouse_genomes_project 3 102780585 102788036 + MGP_CBAJ_P0061881 Rfx5 protein_coding protein_coding MGP_CBAJ_T0061882.1 MGP_CBAJ_G0027243.1 mouse_genomes_project 3 102780585 102783004 + MGP_CBAJ_P0061882 Rfx5 protein_coding protein_coding MGP_CBAJ_T0061883.1 MGP_CBAJ_G0027243.1 mouse_genomes_project 3 102780586 102782788 + MGP_CBAJ_P0061883 Rfx5 protein_coding protein_coding MGP_CBAJ_T0061884.1 MGP_CBAJ_G0027243.1 mouse_genomes_project 3 102780612 102787824 + MGP_CBAJ_P0061884 Rfx5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061885.1 MGP_CBAJ_G0027243.1 mouse_genomes_project 3 102780637 102782178 + Rfx5 protein_coding processed_transcript MGP_CBAJ_T0061886.1 MGP_CBAJ_G0027243.1 mouse_genomes_project 3 102780637 102783623 + MGP_CBAJ_P0061886 Rfx5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061887.1 MGP_CBAJ_G0027243.1 mouse_genomes_project 3 102780647 102787824 + MGP_CBAJ_P0061887 Rfx5 protein_coding protein_coding MGP_CBAJ_T0061888.1 MGP_CBAJ_G0027243.1 mouse_genomes_project 3 102780672 102782866 + MGP_CBAJ_P0061888 Rfx5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061889.1 MGP_CBAJ_G0027243.1 mouse_genomes_project 3 102780678 102787821 + Rfx5 protein_coding retained_intron MGP_CBAJ_T0061890.1 MGP_CBAJ_G0027243.1 mouse_genomes_project 3 102780703 102787824 + MGP_CBAJ_P0061890 Rfx5 protein_coding protein_coding MGP_CBAJ_T0061891.1 MGP_CBAJ_G0027243.1 mouse_genomes_project 3 102780861 102783270 + MGP_CBAJ_P0061891 Rfx5 protein_coding protein_coding MGP_CBAJ_T0061892.1 MGP_CBAJ_G0027243.1 mouse_genomes_project 3 102780955 102782802 + MGP_CBAJ_P0061892 Rfx5 protein_coding protein_coding MGP_CBAJ_T0061893.1 MGP_CBAJ_G0027243.1 mouse_genomes_project 3 102781004 102782833 + MGP_CBAJ_P0061893 Rfx5 protein_coding protein_coding MGP_CBAJ_T0061894.1 MGP_CBAJ_G0027243.1 mouse_genomes_project 3 102781237 102786081 + MGP_CBAJ_P0061894 Rfx5 protein_coding protein_coding MGP_CBAJ_T0061895.1 MGP_CBAJ_G0027243.1 mouse_genomes_project 3 102781489 102788036 + MGP_CBAJ_P0061895 Rfx5 protein_coding protein_coding MGP_CBAJ_T0061896.1 MGP_CBAJ_G0027243.1 mouse_genomes_project 3 102781945 102783277 + Rfx5 protein_coding retained_intron MGP_CBAJ_T0001134.1 MGP_CBAJ_G0001063.1 mouse_genomes_project 3 46705199 46709361 + TEC TEC MGP_CBAJ_T0017675.1 MGP_CBAJ_G0015243.1 mouse_genomes_project 3 34206065 34208760 + processed_transcript retained_intron MGP_CBAJ_T0017676.1 MGP_CBAJ_G0015243.1 mouse_genomes_project 3 34206233 34799282 + processed_transcript sense_overlapping MGP_CBAJ_T0017677.1 MGP_CBAJ_G0015243.1 mouse_genomes_project 3 34206253 34836880 + processed_transcript sense_overlapping MGP_CBAJ_T0017678.1 MGP_CBAJ_G0015243.1 mouse_genomes_project 3 34313986 34799357 + processed_transcript sense_overlapping MGP_CBAJ_T0017679.1 MGP_CBAJ_G0015243.1 mouse_genomes_project 3 34314099 34653422 + processed_transcript sense_overlapping MGP_CBAJ_T0017680.1 MGP_CBAJ_G0015243.1 mouse_genomes_project 3 34707681 34836704 + processed_transcript sense_overlapping MGP_CBAJ_T0017681.1 MGP_CBAJ_G0015243.1 mouse_genomes_project 3 34707734 34838845 + processed_transcript sense_overlapping MGP_CBAJ_T0017682.1 MGP_CBAJ_G0015243.1 mouse_genomes_project 3 34707741 34723756 + processed_transcript sense_overlapping MGP_CBAJ_T0017683.1 MGP_CBAJ_G0015243.1 mouse_genomes_project 3 34707745 34799320 + processed_transcript sense_overlapping MGP_CBAJ_T0017684.1 MGP_CBAJ_G0015243.1 mouse_genomes_project 3 34708069 34708136 + processed_transcript misc_RNA MGP_CBAJ_T0017685.1 MGP_CBAJ_G0015243.1 mouse_genomes_project 3 34744216 34836844 + processed_transcript sense_overlapping MGP_CBAJ_T0017686.1 MGP_CBAJ_G0015243.1 mouse_genomes_project 3 34798040 34838845 + processed_transcript sense_overlapping MGP_CBAJ_T0017687.1 MGP_CBAJ_G0015243.1 mouse_genomes_project 3 34799047 34836747 + processed_transcript sense_overlapping MGP_CBAJ_T0017688.1 MGP_CBAJ_G0015243.1 mouse_genomes_project 3 34799125 34841710 + processed_transcript sense_overlapping MGP_CBAJ_T0017689.1 MGP_CBAJ_G0015243.1 mouse_genomes_project 3 34799170 34841673 + processed_transcript sense_overlapping MGP_CBAJ_T0017690.1 MGP_CBAJ_G0015243.1 mouse_genomes_project 3 34799377 34845395 + processed_transcript sense_overlapping MGP_CBAJ_T0017691.1 MGP_CBAJ_G0015243.1 mouse_genomes_project 3 34816959 34837000 + processed_transcript sense_overlapping MGP_CBAJ_T0017692.1 MGP_CBAJ_G0015243.1 mouse_genomes_project 3 34826155 34838847 + processed_transcript sense_overlapping MGP_CBAJ_T0010412.1 MGP_CBAJ_G0008550.1 mouse_genomes_project 3 104269877 104270018 + Gm44492 miRNA miRNA MGP_CBAJ_T0014067.1 MGP_CBAJ_G0012179.1 mouse_genomes_project 3 122301036 122301901 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099195.1 MGP_CBAJ_G0037450.1 mouse_genomes_project 3 97504266 97504413 - Gm23464 snRNA snRNA MGP_CBAJ_T0061762.1 MGP_CBAJ_G0027198.1 mouse_genomes_project 3 100003444 100007241 + MGP_CBAJ_P0061762 Lce1c protein_coding protein_coding MGP_CBAJ_T0013825.1 MGP_CBAJ_G0011937.1 mouse_genomes_project 3 43212515 43212663 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001304.1 MGP_CBAJ_G0001230.1 mouse_genomes_project 3 141321403 141322504 + TEC TEC MGP_CBAJ_T0001350.1 MGP_CBAJ_G0001276.1 mouse_genomes_project 3 170032924 170036916 + TEC TEC MGP_CBAJ_T0004207.1 MGP_CBAJ_G0003695.1 mouse_genomes_project 3 102047484 102057620 - Gm43401 antisense antisense MGP_CBAJ_T0007671.1 MGP_CBAJ_G0006267.1 mouse_genomes_project 3 165908293 165910809 + 4930555A03Rik lincRNA lincRNA MGP_CBAJ_T0007672.1 MGP_CBAJ_G0006267.1 mouse_genomes_project 3 165908329 165910473 + 4930555A03Rik lincRNA lincRNA MGP_CBAJ_T0007673.1 MGP_CBAJ_G0006267.1 mouse_genomes_project 3 165908330 165909759 + 4930555A03Rik lincRNA lincRNA MGP_CBAJ_T0007674.1 MGP_CBAJ_G0006267.1 mouse_genomes_project 3 165909170 165910471 + 4930555A03Rik lincRNA lincRNA MGP_CBAJ_T0013756.1 MGP_CBAJ_G0011868.1 mouse_genomes_project 3 16394931 16395847 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101860.1 MGP_CBAJ_G0039891.1 mouse_genomes_project 3 97412346 97414408 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0004162.1 MGP_CBAJ_G0003661.1 mouse_genomes_project 3 55776569 55781748 + Gm16206 antisense antisense MGP_CBAJ_T0013739.1 MGP_CBAJ_G0011851.1 mouse_genomes_project 3 11398315 11398716 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010408.1 MGP_CBAJ_G0008546.1 mouse_genomes_project 3 100895936 100896045 - Gm22752 miRNA miRNA MGP_CBAJ_T0060855.1 MGP_CBAJ_G0027001.1 mouse_genomes_project 3 81057358 81854572 + MGP_CBAJ_P0060855 Fstl5 protein_coding protein_coding MGP_CBAJ_T0060856.1 MGP_CBAJ_G0027001.1 mouse_genomes_project 3 81057647 81644970 + Fstl5 protein_coding processed_transcript MGP_CBAJ_T0060857.1 MGP_CBAJ_G0027001.1 mouse_genomes_project 3 81058671 81853189 + MGP_CBAJ_P0060857 Fstl5 protein_coding protein_coding MGP_CBAJ_T0060858.1 MGP_CBAJ_G0027001.1 mouse_genomes_project 3 81698900 81702208 + Fstl5 protein_coding retained_intron MGP_CBAJ_T0060859.1 MGP_CBAJ_G0027001.1 mouse_genomes_project 3 81708112 81852102 + MGP_CBAJ_P0060859 Fstl5 protein_coding protein_coding MGP_CBAJ_T0013917.1 MGP_CBAJ_G0012029.1 mouse_genomes_project 3 73705959 73706356 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063981.1 MGP_CBAJ_G0027669.1 mouse_genomes_project 3 167273601 167512959 - MGP_CBAJ_P0063981 Ak5 protein_coding protein_coding MGP_CBAJ_T0063982.1 MGP_CBAJ_G0027669.1 mouse_genomes_project 3 167274649 167347797 - MGP_CBAJ_P0063982 Ak5 protein_coding protein_coding MGP_CBAJ_T0063983.1 MGP_CBAJ_G0027669.1 mouse_genomes_project 3 167284236 167290007 - Ak5 protein_coding retained_intron MGP_CBAJ_T0061735.1 MGP_CBAJ_G0027174.1 mouse_genomes_project 3 99238367 99254493 + MGP_CBAJ_P0061735 Pglyrp3 protein_coding protein_coding MGP_CBAJ_T0062067.1 MGP_CBAJ_G0027274.1 mouse_genomes_project 3 103722512 103733490 - Tars2 protein_coding retained_intron MGP_CBAJ_T0062068.1 MGP_CBAJ_G0027274.1 mouse_genomes_project 3 103722512 103737414 - MGP_CBAJ_P0062068 Tars2 protein_coding protein_coding MGP_CBAJ_T0062069.1 MGP_CBAJ_G0027274.1 mouse_genomes_project 3 103722512 103737423 - MGP_CBAJ_P0062069 Tars2 protein_coding protein_coding MGP_CBAJ_T0062070.1 MGP_CBAJ_G0027274.1 mouse_genomes_project 3 103722512 103737403 - MGP_CBAJ_P0062070 Tars2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062071.1 MGP_CBAJ_G0027274.1 mouse_genomes_project 3 103722512 103737423 - MGP_CBAJ_P0062071 Tars2 protein_coding protein_coding MGP_CBAJ_T0062072.1 MGP_CBAJ_G0027274.1 mouse_genomes_project 3 103722512 103737387 - MGP_CBAJ_P0062072 Tars2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062073.1 MGP_CBAJ_G0027274.1 mouse_genomes_project 3 103722555 103724683 - Tars2 protein_coding processed_transcript MGP_CBAJ_T0062074.1 MGP_CBAJ_G0027274.1 mouse_genomes_project 3 103726389 103737435 - MGP_CBAJ_P0062074 Tars2 protein_coding protein_coding MGP_CBAJ_T0062075.1 MGP_CBAJ_G0027274.1 mouse_genomes_project 3 103728321 103731070 - Tars2 protein_coding processed_transcript MGP_CBAJ_T0062076.1 MGP_CBAJ_G0027274.1 mouse_genomes_project 3 103730052 103737423 - MGP_CBAJ_P0062076 Tars2 protein_coding protein_coding MGP_CBAJ_T0062077.1 MGP_CBAJ_G0027274.1 mouse_genomes_project 3 103730086 103737390 - MGP_CBAJ_P0062077 Tars2 protein_coding protein_coding MGP_CBAJ_T0062078.1 MGP_CBAJ_G0027274.1 mouse_genomes_project 3 103731089 103737423 - MGP_CBAJ_P0062078 Tars2 protein_coding protein_coding MGP_CBAJ_T0062079.1 MGP_CBAJ_G0027274.1 mouse_genomes_project 3 103731112 103736907 - Tars2 protein_coding processed_transcript MGP_CBAJ_T0062080.1 MGP_CBAJ_G0027274.1 mouse_genomes_project 3 103731114 103737401 - MGP_CBAJ_P0062080 Tars2 protein_coding protein_coding MGP_CBAJ_T0062081.1 MGP_CBAJ_G0027274.1 mouse_genomes_project 3 103732750 103733490 - Tars2 protein_coding retained_intron MGP_CBAJ_T0062082.1 MGP_CBAJ_G0027274.1 mouse_genomes_project 3 103732876 103737369 - Tars2 protein_coding processed_transcript MGP_CBAJ_T0062083.1 MGP_CBAJ_G0027274.1 mouse_genomes_project 3 103733211 103737024 - Tars2 protein_coding retained_intron MGP_CBAJ_T0062084.1 MGP_CBAJ_G0027274.1 mouse_genomes_project 3 103733275 103737401 - MGP_CBAJ_P0062084 Tars2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062085.1 MGP_CBAJ_G0027274.1 mouse_genomes_project 3 103737357 103742764 - MGP_CBAJ_P0062085 Tars2 protein_coding protein_coding MGP_CBAJ_T0014115.1 MGP_CBAJ_G0012227.1 mouse_genomes_project 3 142150582 142150933 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014091.1 MGP_CBAJ_G0012203.1 mouse_genomes_project 3 132253266 132254038 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100474.1 MGP_CBAJ_G0038729.1 mouse_genomes_project 3 107560707 107560836 - Gm22341 snoRNA snoRNA MGP_CBAJ_T0007626.1 MGP_CBAJ_G0006232.1 mouse_genomes_project 3 153935705 154005807 - lincRNA lincRNA MGP_CBAJ_T0007627.1 MGP_CBAJ_G0006232.1 mouse_genomes_project 3 154005167 154005807 - lincRNA lincRNA MGP_CBAJ_T0001103.1 MGP_CBAJ_G0001032.1 mouse_genomes_project 3 34044681 34045629 + TEC TEC MGP_CBAJ_T0061710.1 MGP_CBAJ_G0027162.1 mouse_genomes_project 3 97504288 97528563 + S100a3 protein_coding processed_transcript MGP_CBAJ_T0061711.1 MGP_CBAJ_G0027162.1 mouse_genomes_project 3 97527896 97545387 + MGP_CBAJ_P0061711 S100a3 protein_coding protein_coding MGP_CBAJ_T0061712.1 MGP_CBAJ_G0027162.1 mouse_genomes_project 3 97530189 97545433 + MGP_CBAJ_P0061712 S100a3 protein_coding protein_coding MGP_CBAJ_T0061714.1 MGP_CBAJ_G0027162.1 mouse_genomes_project 3 97543123 97545611 + MGP_CBAJ_P0061714 S100a3 protein_coding protein_coding MGP_CBAJ_T0061715.1 MGP_CBAJ_G0027162.1 mouse_genomes_project 3 97543153 97545611 + S100a3 protein_coding retained_intron MGP_CBAJ_T0061078.1 MGP_CBAJ_G0027055.1 mouse_genomes_project 3 93927038 93941759 + MGP_CBAJ_P0061078 Etv3 protein_coding protein_coding MGP_CBAJ_T0061079.1 MGP_CBAJ_G0027055.1 mouse_genomes_project 3 93927209 93941745 + MGP_CBAJ_P0061079 Etv3 protein_coding protein_coding MGP_CBAJ_T0061080.1 MGP_CBAJ_G0027055.1 mouse_genomes_project 3 93927238 93941759 + Etv3 protein_coding retained_intron MGP_CBAJ_T0061081.1 MGP_CBAJ_G0027055.1 mouse_genomes_project 3 93927245 93932675 + MGP_CBAJ_P0061081 Etv3 protein_coding protein_coding MGP_CBAJ_T0061082.1 MGP_CBAJ_G0027055.1 mouse_genomes_project 3 93927249 93932678 + Etv3 protein_coding retained_intron MGP_CBAJ_T0100477.1 MGP_CBAJ_G0038732.1 mouse_genomes_project 3 112280350 112280452 + Gm25009 snoRNA snoRNA MGP_CBAJ_T0011417.1 MGP_CBAJ_G0009555.1 mouse_genomes_project 3 96078426 96078678 + Gm22642 misc_RNA misc_RNA MGP_CBAJ_T0061912.1 MGP_CBAJ_G0027246.1 mouse_genomes_project 3 102865821 102883205 - MGP_CBAJ_P0061912 Psmd4 protein_coding protein_coding MGP_CBAJ_T0061913.1 MGP_CBAJ_G0027246.1 mouse_genomes_project 3 102865824 102883143 - MGP_CBAJ_P0061913 Psmd4 protein_coding protein_coding MGP_CBAJ_T0061914.1 MGP_CBAJ_G0027246.1 mouse_genomes_project 3 102865831 102868395 - MGP_CBAJ_P0061914 Psmd4 protein_coding protein_coding MGP_CBAJ_T0061915.1 MGP_CBAJ_G0027246.1 mouse_genomes_project 3 102865832 102883139 - Psmd4 protein_coding retained_intron MGP_CBAJ_T0061916.1 MGP_CBAJ_G0027246.1 mouse_genomes_project 3 102865832 102883134 - MGP_CBAJ_P0061916 Psmd4 protein_coding protein_coding MGP_CBAJ_T0061917.1 MGP_CBAJ_G0027246.1 mouse_genomes_project 3 102866050 102883136 - Psmd4 protein_coding retained_intron MGP_CBAJ_T0061918.1 MGP_CBAJ_G0027246.1 mouse_genomes_project 3 102866055 102867044 - Psmd4 protein_coding retained_intron MGP_CBAJ_T0061919.1 MGP_CBAJ_G0027246.1 mouse_genomes_project 3 102868950 102883141 - Psmd4 protein_coding processed_transcript MGP_CBAJ_T0063356.1 MGP_CBAJ_G0027553.1 mouse_genomes_project 3 141944942 141960275 + MGP_CBAJ_P0063356 Casp6 protein_coding protein_coding MGP_CBAJ_T0063357.1 MGP_CBAJ_G0027553.1 mouse_genomes_project 3 141944975 141954916 + Casp6 protein_coding processed_transcript MGP_CBAJ_T0063358.1 MGP_CBAJ_G0027553.1 mouse_genomes_project 3 141945018 141948932 + Casp6 protein_coding retained_intron MGP_CBAJ_T0063359.1 MGP_CBAJ_G0027553.1 mouse_genomes_project 3 141956633 141959773 + Casp6 protein_coding retained_intron MGP_CBAJ_T0013952.1 MGP_CBAJ_G0012064.1 mouse_genomes_project 3 85936212 85936530 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061630.1 MGP_CBAJ_G0027146.1 mouse_genomes_project 3 97168226 97174123 + MGP_CBAJ_P0061630 Jtb protein_coding protein_coding MGP_CBAJ_T0061631.1 MGP_CBAJ_G0027146.1 mouse_genomes_project 3 97168241 97173829 + MGP_CBAJ_P0061631 Jtb protein_coding protein_coding MGP_CBAJ_T0061632.1 MGP_CBAJ_G0027146.1 mouse_genomes_project 3 97168263 97173704 + Jtb protein_coding retained_intron MGP_CBAJ_T0061633.1 MGP_CBAJ_G0027146.1 mouse_genomes_project 3 97168676 97172287 + Jtb protein_coding retained_intron MGP_CBAJ_T0100450.1 MGP_CBAJ_G0038705.1 mouse_genomes_project 3 59824433 59824563 + Gm22269 snoRNA snoRNA MGP_CBAJ_T0098329.1 MGP_CBAJ_G0036595.1 mouse_genomes_project 3 107595665 107600027 + Gm43024 sense_intronic sense_intronic MGP_CBAJ_T0007636.1 MGP_CBAJ_G0006239.1 mouse_genomes_project 3 156895113 156896727 + Gm43613 lincRNA lincRNA MGP_CBAJ_T0013793.1 MGP_CBAJ_G0011905.1 mouse_genomes_project 3 34174792 34178512 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062686.1 MGP_CBAJ_G0027418.1 mouse_genomes_project 3 116548150 116560702 + MGP_CBAJ_P0062686 Kcna10 protein_coding protein_coding MGP_CBAJ_T0062687.1 MGP_CBAJ_G0027418.1 mouse_genomes_project 3 116548238 116552420 + Kcna10 protein_coding processed_transcript MGP_CBAJ_T0059859.1 MGP_CBAJ_G0026802.1 mouse_genomes_project 3 26741427 26748089 + MGP_CBAJ_P0059859 Ghsr protein_coding protein_coding MGP_CBAJ_T0014131.1 MGP_CBAJ_G0012243.1 mouse_genomes_project 3 147510268 147510722 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014023.1 MGP_CBAJ_G0012135.1 mouse_genomes_project 3 109487613 109488112 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001320.1 MGP_CBAJ_G0001246.1 mouse_genomes_project 3 146006200 146020447 - TEC TEC MGP_CBAJ_T0099173.1 MGP_CBAJ_G0037428.1 mouse_genomes_project 3 69151469 69151562 + Gm22279 snRNA snRNA MGP_CBAJ_T0063209.1 MGP_CBAJ_G0027531.1 mouse_genomes_project 3 136832852 137193382 + MGP_CBAJ_P0063209 Ndst4 protein_coding protein_coding MGP_CBAJ_T0063210.1 MGP_CBAJ_G0027531.1 mouse_genomes_project 3 136832866 137145629 + Ndst4 protein_coding retained_intron MGP_CBAJ_T0063211.1 MGP_CBAJ_G0027531.1 mouse_genomes_project 3 137011706 137065739 + MGP_CBAJ_P0063211 Ndst4 protein_coding protein_coding MGP_CBAJ_T0063212.1 MGP_CBAJ_G0027531.1 mouse_genomes_project 3 137139948 137192822 + MGP_CBAJ_P0063212 Ndst4 protein_coding protein_coding MGP_CBAJ_T0063213.1 MGP_CBAJ_G0027531.1 mouse_genomes_project 3 137139958 137151774 + Ndst4 protein_coding processed_transcript MGP_CBAJ_T0063214.1 MGP_CBAJ_G0027531.1 mouse_genomes_project 3 137173063 137187584 + MGP_CBAJ_P0063214 Ndst4 protein_coding protein_coding MGP_CBAJ_T0004309.1 MGP_CBAJ_G0003757.1 mouse_genomes_project 3 154795571 154803272 - Gm15688 antisense antisense MGP_CBAJ_T0061748.1 MGP_CBAJ_G0027186.1 mouse_genomes_project 3 99717742 99719747 - MGP_CBAJ_P0061748 Sprr1b protein_coding protein_coding MGP_CBAJ_T0001099.1 MGP_CBAJ_G0001028.1 mouse_genomes_project 3 32395837 32396994 + TEC TEC MGP_CBAJ_T0098342.1 MGP_CBAJ_G0036608.1 mouse_genomes_project 3 110845066 110847948 + 4632404M16Rik sense_intronic sense_intronic MGP_CBAJ_T0062456.1 MGP_CBAJ_G0027366.1 mouse_genomes_project 3 111878723 111912043 + MGP_CBAJ_P0062456 Ampd1 protein_coding protein_coding MGP_CBAJ_T0062457.1 MGP_CBAJ_G0027366.1 mouse_genomes_project 3 111878731 111912037 + MGP_CBAJ_P0062457 Ampd1 protein_coding protein_coding MGP_CBAJ_T0062458.1 MGP_CBAJ_G0027366.1 mouse_genomes_project 3 111878762 111895387 + MGP_CBAJ_P0062458 Ampd1 protein_coding protein_coding MGP_CBAJ_T0062459.1 MGP_CBAJ_G0027366.1 mouse_genomes_project 3 111900800 111901828 + Ampd1 protein_coding retained_intron MGP_CBAJ_T0062460.1 MGP_CBAJ_G0027366.1 mouse_genomes_project 3 111901471 111912029 + MGP_CBAJ_P0062460 Ampd1 protein_coding protein_coding MGP_CBAJ_T0004298.1 MGP_CBAJ_G0003751.1 mouse_genomes_project 3 148519410 148548493 + antisense antisense MGP_CBAJ_T0004299.1 MGP_CBAJ_G0003751.1 mouse_genomes_project 3 148547722 148828833 + antisense antisense MGP_CBAJ_T0062179.1 MGP_CBAJ_G0027299.1 mouse_genomes_project 3 104705713 104709401 + MGP_CBAJ_P0062179 Gm16253 protein_coding protein_coding MGP_CBAJ_T0014081.1 MGP_CBAJ_G0012193.1 mouse_genomes_project 3 127320753 127321143 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0062467.1 MGP_CBAJ_G0027368.1 mouse_genomes_project 3 111984729 111992215 + MGP_CBAJ_P0062467 Bcas2 protein_coding protein_coding MGP_CBAJ_T0062468.1 MGP_CBAJ_G0027368.1 mouse_genomes_project 3 111984777 111991888 + Bcas2 protein_coding retained_intron MGP_CBAJ_T0062469.1 MGP_CBAJ_G0027368.1 mouse_genomes_project 3 111984823 111991890 + Bcas2 protein_coding retained_intron MGP_CBAJ_T0062470.1 MGP_CBAJ_G0027368.1 mouse_genomes_project 3 111984836 111991510 + MGP_CBAJ_P0062470 Bcas2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062471.1 MGP_CBAJ_G0027368.1 mouse_genomes_project 3 111984846 111992229 + MGP_CBAJ_P0062471 Bcas2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062472.1 MGP_CBAJ_G0027368.1 mouse_genomes_project 3 111984859 111987610 + Bcas2 protein_coding retained_intron MGP_CBAJ_T0061754.1 MGP_CBAJ_G0027192.1 mouse_genomes_project 3 99897409 99899747 - MGP_CBAJ_P0061754 Smcp protein_coding protein_coding MGP_CBAJ_T0061755.1 MGP_CBAJ_G0027192.1 mouse_genomes_project 3 99897409 99902502 - MGP_CBAJ_P0061755 Smcp protein_coding protein_coding MGP_CBAJ_T0013970.1 MGP_CBAJ_G0012082.1 mouse_genomes_project 3 94808798 94808945 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013982.1 MGP_CBAJ_G0012094.1 mouse_genomes_project 3 99595841 99596142 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004289.1 MGP_CBAJ_G0003744.1 mouse_genomes_project 3 141753030 141764372 + Gm42697 antisense antisense MGP_CBAJ_T0100471.1 MGP_CBAJ_G0038726.1 mouse_genomes_project 3 102940661 102940746 - Gm24920 snoRNA snoRNA MGP_CBAJ_T0013981.1 MGP_CBAJ_G0012093.1 mouse_genomes_project 3 99590190 99590327 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004140.1 MGP_CBAJ_G0003645.1 mouse_genomes_project 3 33895506 33896197 + Gm43140 antisense antisense MGP_CBAJ_T0060645.1 MGP_CBAJ_G0026951.1 mouse_genomes_project 3 65795180 65838166 - MGP_CBAJ_P0060645 Dhx36 protein_coding protein_coding MGP_CBAJ_T0060646.1 MGP_CBAJ_G0026951.1 mouse_genomes_project 3 65797812 65799755 - Dhx36 protein_coding retained_intron MGP_CBAJ_T0060647.1 MGP_CBAJ_G0026951.1 mouse_genomes_project 3 65812541 65816979 - Dhx36 protein_coding retained_intron MGP_CBAJ_T0060648.1 MGP_CBAJ_G0026951.1 mouse_genomes_project 3 65829179 65833380 - Dhx36 protein_coding retained_intron MGP_CBAJ_T0007469.1 MGP_CBAJ_G0006109.1 mouse_genomes_project 3 74976045 75016543 - Gm6634 lincRNA lincRNA MGP_CBAJ_T0013840.1 MGP_CBAJ_G0011952.1 mouse_genomes_project 3 49057569 49058279 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014074.1 MGP_CBAJ_G0012186.1 mouse_genomes_project 3 124787306 124787658 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010414.1 MGP_CBAJ_G0008552.1 mouse_genomes_project 3 107653836 107653946 - Mir6481 miRNA miRNA MGP_CBAJ_T0007650.1 MGP_CBAJ_G0006251.1 mouse_genomes_project 3 157696235 157737319 - Gm42709 lincRNA lincRNA MGP_CBAJ_T0001269.1 MGP_CBAJ_G0001196.1 mouse_genomes_project 3 133127682 133134929 + TEC TEC MGP_CBAJ_T0017708.1 MGP_CBAJ_G0015251.1 mouse_genomes_project 3 94720132 94722991 + AW047730 processed_transcript processed_transcript MGP_CBAJ_T0017709.1 MGP_CBAJ_G0015251.1 mouse_genomes_project 3 94720144 94722991 + AW047730 processed_transcript processed_transcript MGP_CBAJ_T0059639.1 MGP_CBAJ_G0026744.1 mouse_genomes_project 3 5997603 6001501 - MGP_CBAJ_P0059639 Hey1 protein_coding protein_coding MGP_CBAJ_T0059640.1 MGP_CBAJ_G0026744.1 mouse_genomes_project 3 5998943 6001229 - Hey1 protein_coding retained_intron MGP_CBAJ_T0059641.1 MGP_CBAJ_G0026744.1 mouse_genomes_project 3 5999040 6000870 - Hey1 protein_coding retained_intron MGP_CBAJ_T0059642.1 MGP_CBAJ_G0026744.1 mouse_genomes_project 3 5999786 6001209 - Hey1 protein_coding retained_intron MGP_CBAJ_T0062494.1 MGP_CBAJ_G0027374.1 mouse_genomes_project 3 112669648 112720905 - MGP_CBAJ_P0062494 Hipk1 protein_coding protein_coding MGP_CBAJ_T0062495.1 MGP_CBAJ_G0027374.1 mouse_genomes_project 3 112673395 112720423 - MGP_CBAJ_P0062495 Hipk1 protein_coding protein_coding MGP_CBAJ_T0062496.1 MGP_CBAJ_G0027374.1 mouse_genomes_project 3 112673493 112720598 - MGP_CBAJ_P0062496 Hipk1 protein_coding protein_coding MGP_CBAJ_T0062497.1 MGP_CBAJ_G0027374.1 mouse_genomes_project 3 112674989 112720903 - MGP_CBAJ_P0062497 Hipk1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062498.1 MGP_CBAJ_G0027374.1 mouse_genomes_project 3 112677948 112680872 - Hipk1 protein_coding retained_intron MGP_CBAJ_T0062499.1 MGP_CBAJ_G0027374.1 mouse_genomes_project 3 112679197 112680821 - Hipk1 protein_coding retained_intron MGP_CBAJ_T0062500.1 MGP_CBAJ_G0027374.1 mouse_genomes_project 3 112683966 112720617 - Hipk1 protein_coding retained_intron MGP_CBAJ_T0100431.1 MGP_CBAJ_G0038686.1 mouse_genomes_project 3 8663741 8663859 - Gm22795 snoRNA snoRNA MGP_CBAJ_T0001083.1 MGP_CBAJ_G0001012.1 mouse_genomes_project 3 19626282 19630337 + TEC TEC MGP_CBAJ_T0062942.1 MGP_CBAJ_G0027478.1 mouse_genomes_project 3 125175885 125414080 + MGP_CBAJ_P0062942 Olfm3 protein_coding protein_coding MGP_CBAJ_T0062943.1 MGP_CBAJ_G0027478.1 mouse_genomes_project 3 125176442 125409343 + MGP_CBAJ_P0062943 Olfm3 protein_coding protein_coding MGP_CBAJ_T0062944.1 MGP_CBAJ_G0027478.1 mouse_genomes_project 3 125366448 125413625 + MGP_CBAJ_P0062944 Olfm3 protein_coding protein_coding MGP_CBAJ_T0007584.1 MGP_CBAJ_G0006195.1 mouse_genomes_project 3 133444808 133455003 + Gm40190 lincRNA lincRNA MGP_CBAJ_T0061740.1 MGP_CBAJ_G0027179.1 mouse_genomes_project 3 99608381 99610221 + MGP_CBAJ_P0061740 Sprr2d protein_coding protein_coding MGP_CBAJ_T0001342.1 MGP_CBAJ_G0001268.1 mouse_genomes_project 3 167180224 167181639 - TEC TEC MGP_CBAJ_T0013988.1 MGP_CBAJ_G0012100.1 mouse_genomes_project 3 100668499 100672483 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0062786.1 MGP_CBAJ_G0027446.1 mouse_genomes_project 3 117702956 117708104 - MGP_CBAJ_P0062786 Cyb561d1 protein_coding protein_coding MGP_CBAJ_T0062787.1 MGP_CBAJ_G0027446.1 mouse_genomes_project 3 117703040 117708482 - Cyb561d1 protein_coding processed_transcript MGP_CBAJ_T0062788.1 MGP_CBAJ_G0027446.1 mouse_genomes_project 3 117703040 117708104 - MGP_CBAJ_P0062788 Cyb561d1 protein_coding protein_coding MGP_CBAJ_T0062789.1 MGP_CBAJ_G0027446.1 mouse_genomes_project 3 117705542 117707865 - MGP_CBAJ_P0062789 Cyb561d1 protein_coding protein_coding MGP_CBAJ_T0060725.1 MGP_CBAJ_G0026969.1 mouse_genomes_project 3 70709627 70719200 - MGP_CBAJ_P0060725 Shox2 protein_coding protein_coding MGP_CBAJ_T0060726.1 MGP_CBAJ_G0026969.1 mouse_genomes_project 3 70709636 70719256 - MGP_CBAJ_P0060726 Shox2 protein_coding protein_coding MGP_CBAJ_T0060727.1 MGP_CBAJ_G0026969.1 mouse_genomes_project 3 70709691 70719709 - MGP_CBAJ_P0060727 Shox2 protein_coding protein_coding MGP_CBAJ_T0060728.1 MGP_CBAJ_G0026969.1 mouse_genomes_project 3 70711807 70716751 - MGP_CBAJ_P0060728 Shox2 protein_coding protein_coding MGP_CBAJ_T0063154.1 MGP_CBAJ_G0027519.1 mouse_genomes_project 3 134134466 134140758 - MGP_CBAJ_P0063154 Gm10959 protein_coding protein_coding MGP_CBAJ_T0061001.1 MGP_CBAJ_G0027034.1 mouse_genomes_project 3 90441066 90478986 - MGP_CBAJ_P0061001 Fhdc1 protein_coding protein_coding MGP_CBAJ_T0061002.1 MGP_CBAJ_G0027034.1 mouse_genomes_project 3 90442906 90478051 - MGP_CBAJ_P0061002 Fhdc1 protein_coding protein_coding MGP_CBAJ_T0061003.1 MGP_CBAJ_G0027034.1 mouse_genomes_project 3 90442979 90478950 - MGP_CBAJ_P0061003 Fhdc1 protein_coding protein_coding MGP_CBAJ_T0061004.1 MGP_CBAJ_G0027034.1 mouse_genomes_project 3 90447689 90452564 - Fhdc1 protein_coding retained_intron MGP_CBAJ_T0061005.1 MGP_CBAJ_G0027034.1 mouse_genomes_project 3 90473066 90477542 - Fhdc1 protein_coding processed_transcript MGP_CBAJ_T0004222.1 MGP_CBAJ_G0003703.1 mouse_genomes_project 3 104254050 104265970 - Gm15444 antisense antisense MGP_CBAJ_T0100460.1 MGP_CBAJ_G0038715.1 mouse_genomes_project 3 92139262 92139381 + Gm25876 snoRNA snoRNA MGP_CBAJ_T0059717.1 MGP_CBAJ_G0026768.1 mouse_genomes_project 3 12907303 12973712 - MGP_CBAJ_P0059717 Car1 protein_coding protein_coding MGP_CBAJ_T0059718.1 MGP_CBAJ_G0026768.1 mouse_genomes_project 3 12907304 12931382 - MGP_CBAJ_P0059718 Car1 protein_coding protein_coding MGP_CBAJ_T0059719.1 MGP_CBAJ_G0026768.1 mouse_genomes_project 3 12915465 12973715 - MGP_CBAJ_P0059719 Car1 protein_coding protein_coding MGP_CBAJ_T0001249.1 MGP_CBAJ_G0001176.1 mouse_genomes_project 3 118114851 118116290 + TEC TEC MGP_CBAJ_T0098382.1 MGP_CBAJ_G0036648.1 mouse_genomes_project 3 168381088 168392079 - 1700015C17Rik sense_intronic sense_intronic MGP_CBAJ_T0100481.1 MGP_CBAJ_G0038736.1 mouse_genomes_project 3 122139246 122139372 - Gm25519 snoRNA snoRNA MGP_CBAJ_T0060888.1 MGP_CBAJ_G0027007.1 mouse_genomes_project 3 85087625 85091357 + MGP_CBAJ_P0060888 4930579G24Rik protein_coding protein_coding MGP_CBAJ_T0001162.1 MGP_CBAJ_G0001090.1 mouse_genomes_project 3 54061433 54065416 - TEC TEC MGP_CBAJ_T0001163.1 MGP_CBAJ_G0001090.1 mouse_genomes_project 3 54061434 54065416 - TEC pseudogene MGP_CBAJ_T0013752.1 MGP_CBAJ_G0011864.1 mouse_genomes_project 3 15622020 15622354 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099206.1 MGP_CBAJ_G0037461.1 mouse_genomes_project 3 112342737 112342844 - Gm25199 snRNA snRNA MGP_CBAJ_T0014175.1 MGP_CBAJ_G0012287.1 mouse_genomes_project 3 160770901 160771517 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061734.1 MGP_CBAJ_G0027173.1 mouse_genomes_project 3 98041904 98044561 - MGP_CBAJ_P0061734 9130204L05Rik protein_coding protein_coding MGP_CBAJ_T0004311.1 MGP_CBAJ_G0003759.1 mouse_genomes_project 3 156309924 156310944 - Gm15540 antisense antisense MGP_CBAJ_T0062659.1 MGP_CBAJ_G0027412.1 mouse_genomes_project 3 115829801 115857682 + MGP_CBAJ_P0062659 Dram2 protein_coding protein_coding MGP_CBAJ_T0062660.1 MGP_CBAJ_G0027412.1 mouse_genomes_project 3 115829830 115848273 + Dram2 protein_coding retained_intron MGP_CBAJ_T0062661.1 MGP_CBAJ_G0027412.1 mouse_genomes_project 3 115829834 115837274 + MGP_CBAJ_P0062661 Dram2 protein_coding protein_coding MGP_CBAJ_T0062662.1 MGP_CBAJ_G0027412.1 mouse_genomes_project 3 115829867 115856645 + MGP_CBAJ_P0062662 Dram2 protein_coding protein_coding MGP_CBAJ_T0062663.1 MGP_CBAJ_G0027412.1 mouse_genomes_project 3 115829873 115848114 + Dram2 protein_coding retained_intron MGP_CBAJ_T0062664.1 MGP_CBAJ_G0027412.1 mouse_genomes_project 3 115829875 115856645 + MGP_CBAJ_P0062664 Dram2 protein_coding protein_coding MGP_CBAJ_T0062665.1 MGP_CBAJ_G0027412.1 mouse_genomes_project 3 115829880 115852686 + MGP_CBAJ_P0062665 Dram2 protein_coding protein_coding MGP_CBAJ_T0062666.1 MGP_CBAJ_G0027412.1 mouse_genomes_project 3 115829880 115837242 + MGP_CBAJ_P0062666 Dram2 protein_coding protein_coding MGP_CBAJ_T0062667.1 MGP_CBAJ_G0027412.1 mouse_genomes_project 3 115829884 115852623 + MGP_CBAJ_P0062667 Dram2 protein_coding protein_coding MGP_CBAJ_T0014194.1 MGP_CBAJ_G0012306.1 mouse_genomes_project 3 174980425 174980647 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001155.1 MGP_CBAJ_G0001084.1 mouse_genomes_project 3 53822687 53824046 + TEC TEC MGP_CBAJ_T0001156.1 MGP_CBAJ_G0001084.1 mouse_genomes_project 3 53822742 53824046 + TEC TEC MGP_CBAJ_T0007556.1 MGP_CBAJ_G0006174.1 mouse_genomes_project 3 116362117 116379533 + AI504432 lincRNA lincRNA MGP_CBAJ_T0001095.1 MGP_CBAJ_G0001024.1 mouse_genomes_project 3 30216006 30218085 - TEC TEC MGP_CBAJ_T0004131.1 MGP_CBAJ_G0003638.1 mouse_genomes_project 3 30428777 30436224 + Gm15462 antisense antisense MGP_CBAJ_T0001090.1 MGP_CBAJ_G0001019.1 mouse_genomes_project 3 29853097 29854732 - TEC TEC MGP_CBAJ_T0011409.1 MGP_CBAJ_G0009547.1 mouse_genomes_project 3 34814111 34814219 + Gm27611 misc_RNA misc_RNA MGP_CBAJ_T0001107.1 MGP_CBAJ_G0001036.1 mouse_genomes_project 3 34824571 34825202 - TEC TEC MGP_CBAJ_T0061927.1 MGP_CBAJ_G0027248.1 mouse_genomes_project 3 102974560 102989379 + MGP_CBAJ_P0061927 Vps72 protein_coding protein_coding MGP_CBAJ_T0061928.1 MGP_CBAJ_G0027248.1 mouse_genomes_project 3 102974580 102984868 + Vps72 protein_coding processed_transcript MGP_CBAJ_T0061929.1 MGP_CBAJ_G0027248.1 mouse_genomes_project 3 102974611 102989049 + Vps72 protein_coding processed_transcript MGP_CBAJ_T0061930.1 MGP_CBAJ_G0027248.1 mouse_genomes_project 3 102981417 102985668 + Vps72 protein_coding processed_transcript MGP_CBAJ_T0061931.1 MGP_CBAJ_G0027248.1 mouse_genomes_project 3 102983281 102985787 + Vps72 protein_coding retained_intron MGP_CBAJ_T0063051.1 MGP_CBAJ_G0027502.1 mouse_genomes_project 3 130560631 130632430 - MGP_CBAJ_P0063051 Ptbp2 protein_coding protein_coding MGP_CBAJ_T0063052.1 MGP_CBAJ_G0027502.1 mouse_genomes_project 3 130560631 130632018 - MGP_CBAJ_P0063052 Ptbp2 protein_coding protein_coding MGP_CBAJ_T0063053.1 MGP_CBAJ_G0027502.1 mouse_genomes_project 3 130562210 130631864 - MGP_CBAJ_P0063053 Ptbp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063054.1 MGP_CBAJ_G0027502.1 mouse_genomes_project 3 130562235 130568042 - MGP_CBAJ_P0063054 Ptbp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063055.1 MGP_CBAJ_G0027502.1 mouse_genomes_project 3 130562274 130586258 - Ptbp2 protein_coding retained_intron MGP_CBAJ_T0063056.1 MGP_CBAJ_G0027502.1 mouse_genomes_project 3 130562699 130566289 - Ptbp2 protein_coding retained_intron MGP_CBAJ_T0063057.1 MGP_CBAJ_G0027502.1 mouse_genomes_project 3 130566008 130585889 - MGP_CBAJ_P0063057 Ptbp2 protein_coding protein_coding MGP_CBAJ_T0063058.1 MGP_CBAJ_G0027502.1 mouse_genomes_project 3 130584100 130588147 - Ptbp2 protein_coding retained_intron MGP_CBAJ_T0063059.1 MGP_CBAJ_G0027502.1 mouse_genomes_project 3 130592014 130631916 - MGP_CBAJ_P0063059 Ptbp2 protein_coding protein_coding MGP_CBAJ_T0063060.1 MGP_CBAJ_G0027502.1 mouse_genomes_project 3 130593290 130633090 - Ptbp2 protein_coding processed_transcript MGP_CBAJ_T0063061.1 MGP_CBAJ_G0027502.1 mouse_genomes_project 3 130607820 130633092 - Ptbp2 protein_coding processed_transcript MGP_CBAJ_T0063062.1 MGP_CBAJ_G0027502.1 mouse_genomes_project 3 130607825 130632317 - Ptbp2 protein_coding processed_transcript MGP_CBAJ_T0063063.1 MGP_CBAJ_G0027502.1 mouse_genomes_project 3 130607827 130631937 - MGP_CBAJ_P0063063 Ptbp2 protein_coding protein_coding MGP_CBAJ_T0063364.1 MGP_CBAJ_G0027555.1 mouse_genomes_project 3 142042090 142127133 - MGP_CBAJ_P0063364 Sec24b protein_coding protein_coding MGP_CBAJ_T0063365.1 MGP_CBAJ_G0027555.1 mouse_genomes_project 3 142042774 142043852 - Sec24b protein_coding retained_intron MGP_CBAJ_T0063366.1 MGP_CBAJ_G0027555.1 mouse_genomes_project 3 142042943 142043614 - Sec24b protein_coding processed_transcript MGP_CBAJ_T0063367.1 MGP_CBAJ_G0027555.1 mouse_genomes_project 3 142047911 142049652 - Sec24b protein_coding retained_intron MGP_CBAJ_T0063368.1 MGP_CBAJ_G0027555.1 mouse_genomes_project 3 142049566 142100011 - MGP_CBAJ_P0063368 Sec24b protein_coding protein_coding MGP_CBAJ_T0063369.1 MGP_CBAJ_G0027555.1 mouse_genomes_project 3 142066532 142099981 - Sec24b protein_coding retained_intron MGP_CBAJ_T0063370.1 MGP_CBAJ_G0027555.1 mouse_genomes_project 3 142066558 142100287 - MGP_CBAJ_P0063370 Sec24b protein_coding protein_coding MGP_CBAJ_T0063371.1 MGP_CBAJ_G0027555.1 mouse_genomes_project 3 142068932 142090015 - Sec24b protein_coding retained_intron MGP_CBAJ_T0063372.1 MGP_CBAJ_G0027555.1 mouse_genomes_project 3 142100403 142127779 - Sec24b protein_coding processed_transcript MGP_CBAJ_T0060675.1 MGP_CBAJ_G0026956.1 mouse_genomes_project 3 67387445 67422758 - MGP_CBAJ_P0060675 Slc33a1 protein_coding protein_coding MGP_CBAJ_T0060676.1 MGP_CBAJ_G0026956.1 mouse_genomes_project 3 67400459 67422860 - MGP_CBAJ_P0060676 Slc33a1 protein_coding protein_coding MGP_CBAJ_T0060677.1 MGP_CBAJ_G0026956.1 mouse_genomes_project 3 67400543 67422464 - MGP_CBAJ_P0060677 Slc33a1 protein_coding protein_coding MGP_CBAJ_T0014062.1 MGP_CBAJ_G0012174.1 mouse_genomes_project 3 120952431 120952748 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011686.1 MGP_CBAJ_G0009815.1 mouse_genomes_project 3 99647832 99649147 + MGP_CBAJ_P0011686 Sprr2g polymorphic_pseudogene protein_coding MGP_CBAJ_T0061932.1 MGP_CBAJ_G0027249.1 mouse_genomes_project 3 102990802 102993760 + MGP_CBAJ_P0061932 Tmod4 protein_coding protein_coding MGP_CBAJ_T0061933.1 MGP_CBAJ_G0027249.1 mouse_genomes_project 3 102990840 102995336 + MGP_CBAJ_P0061933 Tmod4 protein_coding protein_coding MGP_CBAJ_T0061934.1 MGP_CBAJ_G0027249.1 mouse_genomes_project 3 102990841 102995332 + MGP_CBAJ_P0061934 Tmod4 protein_coding protein_coding MGP_CBAJ_T0061935.1 MGP_CBAJ_G0027249.1 mouse_genomes_project 3 102992530 102994871 + Tmod4 protein_coding retained_intron MGP_CBAJ_T0061936.1 MGP_CBAJ_G0027249.1 mouse_genomes_project 3 102993276 102993973 + Tmod4 protein_coding processed_transcript MGP_CBAJ_T0061937.1 MGP_CBAJ_G0027249.1 mouse_genomes_project 3 102993759 102995335 + Tmod4 protein_coding retained_intron MGP_CBAJ_T0004129.1 MGP_CBAJ_G0003637.1 mouse_genomes_project 3 29704164 29740423 + Mecomos antisense antisense MGP_CBAJ_T0004130.1 MGP_CBAJ_G0003637.1 mouse_genomes_project 3 29709174 29714875 + Mecomos antisense antisense MGP_CBAJ_T0099231.1 MGP_CBAJ_G0037486.1 mouse_genomes_project 3 170979622 170979726 - Gm23038 snRNA snRNA MGP_CBAJ_T0063993.1 MGP_CBAJ_G0027671.1 mouse_genomes_project 3 167675677 167845076 - MGP_CBAJ_P0063993 St6galnac5 protein_coding protein_coding MGP_CBAJ_T0063994.1 MGP_CBAJ_G0027671.1 mouse_genomes_project 3 167838242 167844882 - St6galnac5 protein_coding processed_transcript MGP_CBAJ_T0013719.1 MGP_CBAJ_G0011831.1 mouse_genomes_project 3 5767821 5768629 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062590.1 MGP_CBAJ_G0027392.1 mouse_genomes_project 3 114055863 114105208 - MGP_CBAJ_P0062590 Cttnbp2nl protein_coding protein_coding MGP_CBAJ_T0062591.1 MGP_CBAJ_G0027392.1 mouse_genomes_project 3 114055865 114105013 - MGP_CBAJ_P0062591 Cttnbp2nl protein_coding protein_coding MGP_CBAJ_T0062592.1 MGP_CBAJ_G0027392.1 mouse_genomes_project 3 114060013 114105016 - MGP_CBAJ_P0062592 Cttnbp2nl protein_coding protein_coding MGP_CBAJ_T0062593.1 MGP_CBAJ_G0027392.1 mouse_genomes_project 3 114060043 114104987 - Cttnbp2nl protein_coding retained_intron MGP_CBAJ_T0064041.1 MGP_CBAJ_G0027679.1 mouse_genomes_project 3 169663961 169679937 - Tyw3 protein_coding processed_transcript MGP_CBAJ_T0064042.1 MGP_CBAJ_G0027679.1 mouse_genomes_project 3 169664194 169682429 - MGP_CBAJ_P0064042 Tyw3 protein_coding protein_coding MGP_CBAJ_T0064043.1 MGP_CBAJ_G0027679.1 mouse_genomes_project 3 169672957 169682507 - MGP_CBAJ_P0064043 Tyw3 protein_coding protein_coding MGP_CBAJ_T0010425.1 MGP_CBAJ_G0008563.1 mouse_genomes_project 3 139287723 139287791 + Mir302c miRNA miRNA MGP_CBAJ_T0061207.1 MGP_CBAJ_G0027081.1 mouse_genomes_project 3 94864647 94870425 - MGP_CBAJ_P0061207 Tmem79 protein_coding protein_coding MGP_CBAJ_T0061208.1 MGP_CBAJ_G0027081.1 mouse_genomes_project 3 94865038 94870189 - MGP_CBAJ_P0061208 Tmem79 protein_coding protein_coding MGP_CBAJ_T0061209.1 MGP_CBAJ_G0027081.1 mouse_genomes_project 3 94865039 94870375 - MGP_CBAJ_P0061209 Tmem79 protein_coding protein_coding MGP_CBAJ_T0061210.1 MGP_CBAJ_G0027081.1 mouse_genomes_project 3 94869058 94872065 - MGP_CBAJ_P0061210 Tmem79 protein_coding protein_coding MGP_CBAJ_T0007384.1 MGP_CBAJ_G0006043.1 mouse_genomes_project 3 26489387 26492381 + 1700125G22Rik lincRNA lincRNA MGP_CBAJ_T0013768.1 MGP_CBAJ_G0011880.1 mouse_genomes_project 3 19611866 19613478 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013709.1 MGP_CBAJ_G0011821.1 mouse_genomes_project 3 1805988 1806954 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060133.1 MGP_CBAJ_G0026852.1 mouse_genomes_project 3 36981006 36993999 + MGP_CBAJ_P0060133 Exosc9 protein_coding protein_coding MGP_CBAJ_T0060134.1 MGP_CBAJ_G0026852.1 mouse_genomes_project 3 36981006 36991534 + MGP_CBAJ_P0060134 Exosc9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060135.1 MGP_CBAJ_G0026852.1 mouse_genomes_project 3 36981014 36985148 + Exosc9 protein_coding retained_intron MGP_CBAJ_T0060136.1 MGP_CBAJ_G0026852.1 mouse_genomes_project 3 36981027 36985367 + Exosc9 protein_coding retained_intron MGP_CBAJ_T0060137.1 MGP_CBAJ_G0026852.1 mouse_genomes_project 3 36981038 36985321 + MGP_CBAJ_P0060137 Exosc9 protein_coding protein_coding MGP_CBAJ_T0060138.1 MGP_CBAJ_G0026852.1 mouse_genomes_project 3 36981051 36989779 + Exosc9 protein_coding retained_intron MGP_CBAJ_T0060139.1 MGP_CBAJ_G0026852.1 mouse_genomes_project 3 36983933 36991509 + MGP_CBAJ_P0060139 Exosc9 protein_coding protein_coding MGP_CBAJ_T0060140.1 MGP_CBAJ_G0026852.1 mouse_genomes_project 3 36990566 36993917 + MGP_CBAJ_P0060140 Exosc9 protein_coding protein_coding MGP_CBAJ_T0013897.1 MGP_CBAJ_G0012009.1 mouse_genomes_project 3 69608015 69608439 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061316.1 MGP_CBAJ_G0027096.1 mouse_genomes_project 3 95368395 95377468 + MGP_CBAJ_P0061316 Rit1 protein_coding protein_coding MGP_CBAJ_T0061317.1 MGP_CBAJ_G0027096.1 mouse_genomes_project 3 95368400 95369570 + Rit1 protein_coding retained_intron MGP_CBAJ_T0061318.1 MGP_CBAJ_G0027096.1 mouse_genomes_project 3 95368412 95382456 + MGP_CBAJ_P0061318 Rit1 protein_coding protein_coding MGP_CBAJ_T0061319.1 MGP_CBAJ_G0027096.1 mouse_genomes_project 3 95368413 95382442 + MGP_CBAJ_P0061319 Rit1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061320.1 MGP_CBAJ_G0027096.1 mouse_genomes_project 3 95368417 95382450 + Rit1 protein_coding retained_intron MGP_CBAJ_T0061321.1 MGP_CBAJ_G0027096.1 mouse_genomes_project 3 95368418 95380949 + MGP_CBAJ_P0061321 Rit1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061322.1 MGP_CBAJ_G0027096.1 mouse_genomes_project 3 95368430 95377418 + Rit1 protein_coding retained_intron MGP_CBAJ_T0062555.1 MGP_CBAJ_G0027384.1 mouse_genomes_project 3 113646768 113670621 + MGP_CBAJ_P0062555 Slc16a1 protein_coding protein_coding MGP_CBAJ_T0001113.1 MGP_CBAJ_G0001042.1 mouse_genomes_project 3 37701186 37701666 + TEC TEC MGP_CBAJ_T0061897.1 MGP_CBAJ_G0027244.1 mouse_genomes_project 3 102801442 102833528 + MGP_CBAJ_P0061897 Pi4kb protein_coding protein_coding MGP_CBAJ_T0061898.1 MGP_CBAJ_G0027244.1 mouse_genomes_project 3 102801542 102832840 + MGP_CBAJ_P0061898 Pi4kb protein_coding protein_coding MGP_CBAJ_T0061899.1 MGP_CBAJ_G0027244.1 mouse_genomes_project 3 102801587 102832836 + MGP_CBAJ_P0061899 Pi4kb protein_coding protein_coding MGP_CBAJ_T0061900.1 MGP_CBAJ_G0027244.1 mouse_genomes_project 3 102802827 102833466 + MGP_CBAJ_P0061900 Pi4kb protein_coding protein_coding MGP_CBAJ_T0061901.1 MGP_CBAJ_G0027244.1 mouse_genomes_project 3 102802854 102822637 + MGP_CBAJ_P0061901 Pi4kb protein_coding protein_coding MGP_CBAJ_T0061902.1 MGP_CBAJ_G0027244.1 mouse_genomes_project 3 102825621 102832869 + MGP_CBAJ_P0061902 Pi4kb protein_coding protein_coding MGP_CBAJ_T0061903.1 MGP_CBAJ_G0027244.1 mouse_genomes_project 3 102831003 102832937 + Pi4kb protein_coding processed_transcript MGP_CBAJ_T0061800.1 MGP_CBAJ_G0027226.1 mouse_genomes_project 3 101965446 101987743 + MGP_CBAJ_P0061800 Them4 protein_coding protein_coding MGP_CBAJ_T0061801.1 MGP_CBAJ_G0027226.1 mouse_genomes_project 3 101965487 101973524 + Them4 protein_coding retained_intron MGP_CBAJ_T0061802.1 MGP_CBAJ_G0027226.1 mouse_genomes_project 3 101965493 101981393 + Them4 protein_coding retained_intron MGP_CBAJ_T0007350.1 MGP_CBAJ_G0006021.1 mouse_genomes_project 3 6866749 6898939 + C030034L19Rik lincRNA lincRNA MGP_CBAJ_T0007351.1 MGP_CBAJ_G0006021.1 mouse_genomes_project 3 6866753 6899854 + C030034L19Rik lincRNA lincRNA MGP_CBAJ_T0007352.1 MGP_CBAJ_G0006021.1 mouse_genomes_project 3 6866765 6877595 + C030034L19Rik lincRNA lincRNA MGP_CBAJ_T0098344.1 MGP_CBAJ_G0036610.1 mouse_genomes_project 3 111903250 111910147 + sense_intronic sense_intronic MGP_CBAJ_T0061544.1 MGP_CBAJ_G0027138.1 mouse_genomes_project 3 96820390 96849510 - MGP_CBAJ_P0061544 Atp8b2 protein_coding protein_coding MGP_CBAJ_T0061545.1 MGP_CBAJ_G0027138.1 mouse_genomes_project 3 96820390 96846631 - MGP_CBAJ_P0061545 Atp8b2 protein_coding protein_coding MGP_CBAJ_T0061546.1 MGP_CBAJ_G0027138.1 mouse_genomes_project 3 96820398 96834237 - Atp8b2 protein_coding retained_intron MGP_CBAJ_T0061547.1 MGP_CBAJ_G0027138.1 mouse_genomes_project 3 96821065 96849281 - Atp8b2 protein_coding retained_intron MGP_CBAJ_T0061548.1 MGP_CBAJ_G0027138.1 mouse_genomes_project 3 96821758 96849510 - MGP_CBAJ_P0061548 Atp8b2 protein_coding protein_coding MGP_CBAJ_T0061549.1 MGP_CBAJ_G0027138.1 mouse_genomes_project 3 96822106 96824661 - MGP_CBAJ_P0061549 Atp8b2 protein_coding protein_coding MGP_CBAJ_T0061550.1 MGP_CBAJ_G0027138.1 mouse_genomes_project 3 96824617 96826635 - Atp8b2 protein_coding retained_intron MGP_CBAJ_T0061551.1 MGP_CBAJ_G0027138.1 mouse_genomes_project 3 96826091 96827344 - MGP_CBAJ_P0061551 Atp8b2 protein_coding protein_coding MGP_CBAJ_T0061552.1 MGP_CBAJ_G0027138.1 mouse_genomes_project 3 96826911 96827427 - Atp8b2 protein_coding retained_intron MGP_CBAJ_T0061553.1 MGP_CBAJ_G0027138.1 mouse_genomes_project 3 96827307 96828223 - Atp8b2 protein_coding retained_intron MGP_CBAJ_T0061554.1 MGP_CBAJ_G0027138.1 mouse_genomes_project 3 96827334 96829274 - MGP_CBAJ_P0061554 Atp8b2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061555.1 MGP_CBAJ_G0027138.1 mouse_genomes_project 3 96827398 96829404 - Atp8b2 protein_coding retained_intron MGP_CBAJ_T0061556.1 MGP_CBAJ_G0027138.1 mouse_genomes_project 3 96829416 96831325 - Atp8b2 protein_coding retained_intron MGP_CBAJ_T0061557.1 MGP_CBAJ_G0027138.1 mouse_genomes_project 3 96834710 96835511 - Atp8b2 protein_coding retained_intron MGP_CBAJ_T0061558.1 MGP_CBAJ_G0027138.1 mouse_genomes_project 3 96835141 96845556 - MGP_CBAJ_P0061558 Atp8b2 protein_coding protein_coding MGP_CBAJ_T0061559.1 MGP_CBAJ_G0027138.1 mouse_genomes_project 3 96844008 96849116 - MGP_CBAJ_P0061559 Atp8b2 protein_coding protein_coding MGP_CBAJ_T0061560.1 MGP_CBAJ_G0027138.1 mouse_genomes_project 3 96844555 96847817 - MGP_CBAJ_P0061560 Atp8b2 protein_coding protein_coding MGP_CBAJ_T0060452.1 MGP_CBAJ_G0026906.1 mouse_genomes_project 3 57234886 57241604 - MGP_CBAJ_P0060452 Exosc8 protein_coding protein_coding MGP_CBAJ_T0060453.1 MGP_CBAJ_G0026906.1 mouse_genomes_project 3 57234889 57235667 - Exosc8 protein_coding retained_intron MGP_CBAJ_T0060454.1 MGP_CBAJ_G0026906.1 mouse_genomes_project 3 57234890 57241248 - Exosc8 protein_coding retained_intron MGP_CBAJ_T0060455.1 MGP_CBAJ_G0026906.1 mouse_genomes_project 3 57236050 57241013 - Exosc8 protein_coding retained_intron MGP_CBAJ_T0060456.1 MGP_CBAJ_G0026906.1 mouse_genomes_project 3 57236062 57240524 - MGP_CBAJ_P0060456 Exosc8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060457.1 MGP_CBAJ_G0026906.1 mouse_genomes_project 3 57237517 57241578 - Exosc8 protein_coding retained_intron MGP_CBAJ_T0060458.1 MGP_CBAJ_G0026906.1 mouse_genomes_project 3 57238212 57241257 - MGP_CBAJ_P0060458 Exosc8 protein_coding protein_coding MGP_CBAJ_T0060459.1 MGP_CBAJ_G0026906.1 mouse_genomes_project 3 57238361 57240548 - Exosc8 protein_coding retained_intron MGP_CBAJ_T0060460.1 MGP_CBAJ_G0026906.1 mouse_genomes_project 3 57238371 57239443 - Exosc8 protein_coding retained_intron MGP_CBAJ_T0060461.1 MGP_CBAJ_G0026906.1 mouse_genomes_project 3 57239820 57241246 - Exosc8 protein_coding retained_intron MGP_CBAJ_T0060462.1 MGP_CBAJ_G0026906.1 mouse_genomes_project 3 57240153 57241246 - Exosc8 protein_coding retained_intron MGP_CBAJ_T0007548.1 MGP_CBAJ_G0006168.1 mouse_genomes_project 3 111875888 111877202 + Gm43062 lincRNA lincRNA MGP_CBAJ_T0063186.1 MGP_CBAJ_G0027525.1 mouse_genomes_project 3 134627951 134645314 - MGP_CBAJ_P0063186 Mettl14 protein_coding protein_coding MGP_CBAJ_T0063187.1 MGP_CBAJ_G0027525.1 mouse_genomes_project 3 134627957 134645418 - MGP_CBAJ_P0063187 Mettl14 protein_coding protein_coding MGP_CBAJ_T0063188.1 MGP_CBAJ_G0027525.1 mouse_genomes_project 3 134629162 134634227 - MGP_CBAJ_P0063188 Mettl14 protein_coding protein_coding MGP_CBAJ_T0063189.1 MGP_CBAJ_G0027525.1 mouse_genomes_project 3 134645203 134645585 - Mettl14 protein_coding retained_intron MGP_CBAJ_T0001273.1 MGP_CBAJ_G0001200.1 mouse_genomes_project 3 134440749 134443346 - TEC TEC MGP_CBAJ_T0014137.1 MGP_CBAJ_G0012249.1 mouse_genomes_project 3 148044372 148044701 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063309.1 MGP_CBAJ_G0027544.1 mouse_genomes_project 3 141145125 141164842 + MGP_CBAJ_P0063309 Pitx2 protein_coding protein_coding MGP_CBAJ_T0063310.1 MGP_CBAJ_G0027544.1 mouse_genomes_project 3 141145169 141164830 + MGP_CBAJ_P0063310 Pitx2 protein_coding protein_coding MGP_CBAJ_T0063311.1 MGP_CBAJ_G0027544.1 mouse_genomes_project 3 141145173 141164843 + MGP_CBAJ_P0063311 Pitx2 protein_coding protein_coding MGP_CBAJ_T0063312.1 MGP_CBAJ_G0027544.1 mouse_genomes_project 3 141145216 141149825 + MGP_CBAJ_P0063312 Pitx2 protein_coding protein_coding MGP_CBAJ_T0063313.1 MGP_CBAJ_G0027544.1 mouse_genomes_project 3 141149194 141164149 + MGP_CBAJ_P0063313 Pitx2 protein_coding protein_coding MGP_CBAJ_T0063314.1 MGP_CBAJ_G0027544.1 mouse_genomes_project 3 141159183 141162026 + Pitx2 protein_coding retained_intron MGP_CBAJ_T0063315.1 MGP_CBAJ_G0027544.1 mouse_genomes_project 3 141159223 141164840 + MGP_CBAJ_P0063315 Pitx2 protein_coding protein_coding MGP_CBAJ_T0063316.1 MGP_CBAJ_G0027544.1 mouse_genomes_project 3 141159526 141161876 + MGP_CBAJ_P0063316 Pitx2 protein_coding protein_coding MGP_CBAJ_T0013798.1 MGP_CBAJ_G0011910.1 mouse_genomes_project 3 36301807 36302128 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100496.1 MGP_CBAJ_G0038751.1 mouse_genomes_project 3 157262383 157262508 + Gm24728 snoRNA snoRNA MGP_CBAJ_T0010388.1 MGP_CBAJ_G0008526.1 mouse_genomes_project 3 48403615 48403730 - Mir6379 miRNA miRNA MGP_CBAJ_T0099161.1 MGP_CBAJ_G0037416.1 mouse_genomes_project 3 50822081 50822246 + Gm23511 snRNA snRNA MGP_CBAJ_T0063783.1 MGP_CBAJ_G0027638.1 mouse_genomes_project 3 159693593 159841565 + MGP_CBAJ_P0063783 Ddah1 protein_coding protein_coding MGP_CBAJ_T0063784.1 MGP_CBAJ_G0027638.1 mouse_genomes_project 3 159755929 159836691 + Ddah1 protein_coding processed_transcript MGP_CBAJ_T0060556.1 MGP_CBAJ_G0026927.1 mouse_genomes_project 3 61440019 61446101 - MGP_CBAJ_P0060556 Serp1 protein_coding protein_coding MGP_CBAJ_T0062057.1 MGP_CBAJ_G0027273.1 mouse_genomes_project 3 103716683 103722106 - MGP_CBAJ_P0062057 Ecm1 protein_coding protein_coding MGP_CBAJ_T0062058.1 MGP_CBAJ_G0027273.1 mouse_genomes_project 3 103716684 103722104 - MGP_CBAJ_P0062058 Ecm1 protein_coding protein_coding MGP_CBAJ_T0062059.1 MGP_CBAJ_G0027273.1 mouse_genomes_project 3 103716685 103717555 - Ecm1 protein_coding retained_intron MGP_CBAJ_T0062060.1 MGP_CBAJ_G0027273.1 mouse_genomes_project 3 103718673 103722086 - MGP_CBAJ_P0062060 Ecm1 protein_coding protein_coding MGP_CBAJ_T0062061.1 MGP_CBAJ_G0027273.1 mouse_genomes_project 3 103718685 103722104 - MGP_CBAJ_P0062061 Ecm1 protein_coding protein_coding MGP_CBAJ_T0062062.1 MGP_CBAJ_G0027273.1 mouse_genomes_project 3 103718746 103722106 - MGP_CBAJ_P0062062 Ecm1 protein_coding protein_coding MGP_CBAJ_T0062063.1 MGP_CBAJ_G0027273.1 mouse_genomes_project 3 103719136 103722081 - MGP_CBAJ_P0062063 Ecm1 protein_coding protein_coding MGP_CBAJ_T0062064.1 MGP_CBAJ_G0027273.1 mouse_genomes_project 3 103719297 103722086 - MGP_CBAJ_P0062064 Ecm1 protein_coding protein_coding MGP_CBAJ_T0062065.1 MGP_CBAJ_G0027273.1 mouse_genomes_project 3 103719886 103720760 - Ecm1 protein_coding retained_intron MGP_CBAJ_T0062066.1 MGP_CBAJ_G0027273.1 mouse_genomes_project 3 103720420 103722106 - MGP_CBAJ_P0062066 Ecm1 protein_coding protein_coding MGP_CBAJ_T0062701.1 MGP_CBAJ_G0027426.1 mouse_genomes_project 3 116874084 116930732 - MGP_CBAJ_P0062701 Slc6a17 protein_coding protein_coding MGP_CBAJ_T0062702.1 MGP_CBAJ_G0027426.1 mouse_genomes_project 3 116874089 116930732 - MGP_CBAJ_P0062702 Slc6a17 protein_coding protein_coding MGP_CBAJ_T0062703.1 MGP_CBAJ_G0027426.1 mouse_genomes_project 3 116874090 116913252 - MGP_CBAJ_P0062703 Slc6a17 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062704.1 MGP_CBAJ_G0027426.1 mouse_genomes_project 3 116874092 116875247 - Slc6a17 protein_coding processed_transcript MGP_CBAJ_T0062705.1 MGP_CBAJ_G0027426.1 mouse_genomes_project 3 116894801 116930463 - Slc6a17 protein_coding processed_transcript MGP_CBAJ_T0062706.1 MGP_CBAJ_G0027426.1 mouse_genomes_project 3 116902492 116905918 - Slc6a17 protein_coding processed_transcript MGP_CBAJ_T0062707.1 MGP_CBAJ_G0027426.1 mouse_genomes_project 3 116902494 116930732 - Slc6a17 protein_coding retained_intron MGP_CBAJ_T0062708.1 MGP_CBAJ_G0027426.1 mouse_genomes_project 3 116908436 116930659 - Slc6a17 protein_coding processed_transcript MGP_CBAJ_T0062709.1 MGP_CBAJ_G0027426.1 mouse_genomes_project 3 116908482 116930051 - MGP_CBAJ_P0062709 Slc6a17 protein_coding protein_coding MGP_CBAJ_T0062710.1 MGP_CBAJ_G0027426.1 mouse_genomes_project 3 116913392 116930041 - Slc6a17 protein_coding processed_transcript MGP_CBAJ_T0062092.1 MGP_CBAJ_G0027276.1 mouse_genomes_project 3 103817793 103848913 - MGP_CBAJ_P0062092 Prpf3 protein_coding protein_coding MGP_CBAJ_T0062093.1 MGP_CBAJ_G0027276.1 mouse_genomes_project 3 103818258 103823334 - MGP_CBAJ_P0062093 Prpf3 protein_coding protein_coding MGP_CBAJ_T0062094.1 MGP_CBAJ_G0027276.1 mouse_genomes_project 3 103818280 103848814 - MGP_CBAJ_P0062094 Prpf3 protein_coding unknown_likely_coding MGP_CBAJ_T0062095.1 MGP_CBAJ_G0027276.1 mouse_genomes_project 3 103818287 103841459 - Prpf3 protein_coding retained_intron MGP_CBAJ_T0062096.1 MGP_CBAJ_G0027276.1 mouse_genomes_project 3 103818291 103820477 - Prpf3 protein_coding retained_intron MGP_CBAJ_T0062097.1 MGP_CBAJ_G0027276.1 mouse_genomes_project 3 103818291 103848781 - MGP_CBAJ_P0062097 Prpf3 protein_coding protein_coding MGP_CBAJ_T0062098.1 MGP_CBAJ_G0027276.1 mouse_genomes_project 3 103824157 103837052 - Prpf3 protein_coding processed_transcript MGP_CBAJ_T0062099.1 MGP_CBAJ_G0027276.1 mouse_genomes_project 3 103835689 103838061 - Prpf3 protein_coding retained_intron MGP_CBAJ_T0062100.1 MGP_CBAJ_G0027276.1 mouse_genomes_project 3 103839327 103846660 - MGP_CBAJ_P0062100 Prpf3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062101.1 MGP_CBAJ_G0027276.1 mouse_genomes_project 3 103841420 103848809 - Prpf3 protein_coding retained_intron MGP_CBAJ_T0004175.1 MGP_CBAJ_G0003671.1 mouse_genomes_project 3 68750630 68911189 - antisense antisense MGP_CBAJ_T0004176.1 MGP_CBAJ_G0003671.1 mouse_genomes_project 3 68902764 68911161 - antisense antisense MGP_CBAJ_T0061750.1 MGP_CBAJ_G0027188.1 mouse_genomes_project 3 99782902 99784846 - MGP_CBAJ_P0061750 Sprr1a protein_coding protein_coding MGP_CBAJ_T0059626.1 MGP_CBAJ_G0026739.1 mouse_genomes_project 3 3701648 3706542 - MGP_CBAJ_P0059626 1700008P02Rik protein_coding protein_coding MGP_CBAJ_T0059929.1 MGP_CBAJ_G0026813.1 mouse_genomes_project 3 30323284 30326143 - MGP_CBAJ_P0059929 Actrt3 protein_coding protein_coding MGP_CBAJ_T0098317.1 MGP_CBAJ_G0036584.1 mouse_genomes_project 3 18349213 18349820 + BC002189 sense_intronic sense_intronic MGP_CBAJ_T0062102.1 MGP_CBAJ_G0027277.1 mouse_genomes_project 3 103855543 103864016 - MGP_CBAJ_P0062102 protein_coding protein_coding MGP_CBAJ_T0001349.1 MGP_CBAJ_G0001275.1 mouse_genomes_project 3 169302527 169304497 - TEC TEC MGP_CBAJ_T0062743.1 MGP_CBAJ_G0027435.1 mouse_genomes_project 3 117393618 117399104 - MGP_CBAJ_P0062743 Gstm7 protein_coding protein_coding MGP_CBAJ_T0062744.1 MGP_CBAJ_G0027435.1 mouse_genomes_project 3 117393991 117398954 - MGP_CBAJ_P0062744 Gstm7 protein_coding protein_coding MGP_CBAJ_T0062745.1 MGP_CBAJ_G0027435.1 mouse_genomes_project 3 117394094 117398901 - MGP_CBAJ_P0062745 Gstm7 protein_coding protein_coding MGP_CBAJ_T0062746.1 MGP_CBAJ_G0027435.1 mouse_genomes_project 3 117396347 117398866 - MGP_CBAJ_P0062746 Gstm7 protein_coding protein_coding MGP_CBAJ_T0062747.1 MGP_CBAJ_G0027435.1 mouse_genomes_project 3 117396416 117398897 - MGP_CBAJ_P0062747 Gstm7 protein_coding protein_coding MGP_CBAJ_T0100442.1 MGP_CBAJ_G0038697.1 mouse_genomes_project 3 42234827 42234952 - Gm25487 snoRNA snoRNA MGP_CBAJ_T0059661.1 MGP_CBAJ_G0026750.1 mouse_genomes_project 3 7581980 7591743 + MGP_CBAJ_P0059661 Fabp5 protein_coding protein_coding MGP_CBAJ_T0059662.1 MGP_CBAJ_G0026750.1 mouse_genomes_project 3 7582037 7591471 + Fabp5 protein_coding retained_intron MGP_CBAJ_T0061603.1 MGP_CBAJ_G0027142.1 mouse_genomes_project 3 96972774 96994381 + MGP_CBAJ_P0061603 Tpm3 protein_coding protein_coding MGP_CBAJ_T0061604.1 MGP_CBAJ_G0027142.1 mouse_genomes_project 3 96972776 97004016 + MGP_CBAJ_P0061604 Tpm3 protein_coding protein_coding MGP_CBAJ_T0061605.1 MGP_CBAJ_G0027142.1 mouse_genomes_project 3 96979665 97004016 + MGP_CBAJ_P0061605 Tpm3 protein_coding protein_coding MGP_CBAJ_T0061606.1 MGP_CBAJ_G0027142.1 mouse_genomes_project 3 96979790 96991847 + Tpm3 protein_coding retained_intron MGP_CBAJ_T0061607.1 MGP_CBAJ_G0027142.1 mouse_genomes_project 3 96979790 96990131 + Tpm3 protein_coding retained_intron MGP_CBAJ_T0061608.1 MGP_CBAJ_G0027142.1 mouse_genomes_project 3 96979840 97001034 + MGP_CBAJ_P0061608 Tpm3 protein_coding protein_coding MGP_CBAJ_T0061609.1 MGP_CBAJ_G0027142.1 mouse_genomes_project 3 96979857 96993346 + MGP_CBAJ_P0061609 Tpm3 protein_coding protein_coding MGP_CBAJ_T0061610.1 MGP_CBAJ_G0027142.1 mouse_genomes_project 3 96986230 96989801 + Tpm3 protein_coding retained_intron MGP_CBAJ_T0061611.1 MGP_CBAJ_G0027142.1 mouse_genomes_project 3 96989562 96992058 + Tpm3 protein_coding retained_intron MGP_CBAJ_T0061612.1 MGP_CBAJ_G0027142.1 mouse_genomes_project 3 96989692 96990169 + Tpm3 protein_coding retained_intron MGP_CBAJ_T0061613.1 MGP_CBAJ_G0027142.1 mouse_genomes_project 3 96989709 96990821 + Tpm3 protein_coding retained_intron MGP_CBAJ_T0061614.1 MGP_CBAJ_G0027142.1 mouse_genomes_project 3 96990314 96992293 + Tpm3 protein_coding retained_intron MGP_CBAJ_T0061615.1 MGP_CBAJ_G0027142.1 mouse_genomes_project 3 96991881 96992723 + Tpm3 protein_coding retained_intron MGP_CBAJ_T0061616.1 MGP_CBAJ_G0027142.1 mouse_genomes_project 3 96992309 97001034 + Tpm3 protein_coding processed_transcript MGP_CBAJ_T0062895.1 MGP_CBAJ_G0027469.1 mouse_genomes_project 3 118727360 118771967 + MGP_CBAJ_P0062895 Slc25a54 protein_coding protein_coding MGP_CBAJ_T0062896.1 MGP_CBAJ_G0027469.1 mouse_genomes_project 3 118727390 118771862 + MGP_CBAJ_P0062896 Slc25a54 protein_coding nonsense_mediated_decay MGP_CBAJ_T0001284.1 MGP_CBAJ_G0001211.1 mouse_genomes_project 3 138234526 138235178 + TEC TEC MGP_CBAJ_T0013764.1 MGP_CBAJ_G0011876.1 mouse_genomes_project 3 18437902 18438285 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001285.1 MGP_CBAJ_G0001212.1 mouse_genomes_project 3 138316847 138323689 + TEC TEC MGP_CBAJ_T0014014.1 MGP_CBAJ_G0012126.1 mouse_genomes_project 3 107285173 107285362 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062563.1 MGP_CBAJ_G0027388.1 mouse_genomes_project 3 113829111 113856597 - MGP_CBAJ_P0062563 Mov10 protein_coding protein_coding MGP_CBAJ_T0062564.1 MGP_CBAJ_G0027388.1 mouse_genomes_project 3 113829111 113856339 - MGP_CBAJ_P0062564 Mov10 protein_coding protein_coding MGP_CBAJ_T0062565.1 MGP_CBAJ_G0027388.1 mouse_genomes_project 3 113829111 113856597 - MGP_CBAJ_P0062565 Mov10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062566.1 MGP_CBAJ_G0027388.1 mouse_genomes_project 3 113829111 113856597 - MGP_CBAJ_P0062566 Mov10 protein_coding protein_coding MGP_CBAJ_T0062567.1 MGP_CBAJ_G0027388.1 mouse_genomes_project 3 113829111 113856276 - MGP_CBAJ_P0062567 Mov10 protein_coding protein_coding MGP_CBAJ_T0062568.1 MGP_CBAJ_G0027388.1 mouse_genomes_project 3 113829424 113856106 - MGP_CBAJ_P0062568 Mov10 protein_coding unknown_likely_coding MGP_CBAJ_T0062569.1 MGP_CBAJ_G0027388.1 mouse_genomes_project 3 113843380 113855388 - Mov10 protein_coding processed_transcript MGP_CBAJ_T0062570.1 MGP_CBAJ_G0027388.1 mouse_genomes_project 3 113843421 113856597 - MGP_CBAJ_P0062570 Mov10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062571.1 MGP_CBAJ_G0027388.1 mouse_genomes_project 3 113844238 113856150 - Mov10 protein_coding retained_intron MGP_CBAJ_T0062572.1 MGP_CBAJ_G0027388.1 mouse_genomes_project 3 113844259 113856335 - Mov10 protein_coding processed_transcript MGP_CBAJ_T0099152.1 MGP_CBAJ_G0037407.1 mouse_genomes_project 3 18211815 18211979 + Gm23330 snRNA snRNA MGP_CBAJ_T0061256.1 MGP_CBAJ_G0027089.1 mouse_genomes_project 3 95181375 95187660 - MGP_CBAJ_P0061256 Rab25 protein_coding protein_coding MGP_CBAJ_T0061257.1 MGP_CBAJ_G0027089.1 mouse_genomes_project 3 95181655 95187609 - MGP_CBAJ_P0061257 Rab25 protein_coding protein_coding MGP_CBAJ_T0061258.1 MGP_CBAJ_G0027089.1 mouse_genomes_project 3 95182022 95182861 - Rab25 protein_coding retained_intron MGP_CBAJ_T0061259.1 MGP_CBAJ_G0027089.1 mouse_genomes_project 3 95183988 95187642 - Rab25 protein_coding retained_intron MGP_CBAJ_T0014031.1 MGP_CBAJ_G0012143.1 mouse_genomes_project 3 111431034 111431751 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013868.1 MGP_CBAJ_G0011980.1 mouse_genomes_project 3 60053094 60053723 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001288.1 MGP_CBAJ_G0001215.1 mouse_genomes_project 3 138587931 138589568 - TEC TEC MGP_CBAJ_T0061741.1 MGP_CBAJ_G0027180.1 mouse_genomes_project 3 99625879 99627186 + MGP_CBAJ_P0061741 Sprr2e protein_coding protein_coding MGP_CBAJ_T0014177.1 MGP_CBAJ_G0012289.1 mouse_genomes_project 3 161317234 161317683 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061636.1 MGP_CBAJ_G0027148.1 mouse_genomes_project 3 97186650 97191870 + MGP_CBAJ_P0061636 protein_coding protein_coding MGP_CBAJ_T0063838.1 MGP_CBAJ_G0027652.1 mouse_genomes_project 3 160641026 160677523 - MGP_CBAJ_P0063838 Dnase2b protein_coding protein_coding MGP_CBAJ_T0063839.1 MGP_CBAJ_G0027652.1 mouse_genomes_project 3 160641026 160658532 - MGP_CBAJ_P0063839 Dnase2b protein_coding protein_coding MGP_CBAJ_T0001220.1 MGP_CBAJ_G0001147.1 mouse_genomes_project 3 95390929 95391877 - TEC TEC MGP_CBAJ_T0004197.1 MGP_CBAJ_G0003688.1 mouse_genomes_project 3 96113923 96123850 + 4731419I09Rik antisense antisense MGP_CBAJ_T0099211.1 MGP_CBAJ_G0037466.1 mouse_genomes_project 3 119595349 119595455 + Gm25681 snRNA snRNA MGP_CBAJ_T0013721.1 MGP_CBAJ_G0011833.1 mouse_genomes_project 3 6007654 6007967 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0059944.1 MGP_CBAJ_G0026818.1 mouse_genomes_project 3 30504962 30527312 + MGP_CBAJ_P0059944 Samd7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059945.1 MGP_CBAJ_G0026818.1 mouse_genomes_project 3 30505009 30527320 + MGP_CBAJ_P0059945 Samd7 protein_coding protein_coding MGP_CBAJ_T0059946.1 MGP_CBAJ_G0026818.1 mouse_genomes_project 3 30509712 30525654 + MGP_CBAJ_P0059946 Samd7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059947.1 MGP_CBAJ_G0026818.1 mouse_genomes_project 3 30516454 30517693 + Samd7 protein_coding retained_intron MGP_CBAJ_T0101103.1 MGP_CBAJ_G0039305.1 mouse_genomes_project 3 101989596 101990293 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101104.1 MGP_CBAJ_G0039305.1 mouse_genomes_project 3 101989772 101990535 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0007640.1 MGP_CBAJ_G0006243.1 mouse_genomes_project 3 157153296 157165748 + Gm33651 lincRNA lincRNA MGP_CBAJ_T0061749.1 MGP_CBAJ_G0027187.1 mouse_genomes_project 3 99738516 99740467 - MGP_CBAJ_P0061749 Sprr3 protein_coding protein_coding MGP_CBAJ_T0013769.1 MGP_CBAJ_G0011881.1 mouse_genomes_project 3 19611884 19613478 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0062711.1 MGP_CBAJ_G0027427.1 mouse_genomes_project 3 116966373 116967760 - MGP_CBAJ_P0062711 Ubl4b protein_coding protein_coding MGP_CBAJ_T0060682.1 MGP_CBAJ_G0026961.1 mouse_genomes_project 3 67801386 67840185 - MGP_CBAJ_P0060682 Vmn2r3 protein_coding protein_coding MGP_CBAJ_T0060683.1 MGP_CBAJ_G0026961.1 mouse_genomes_project 3 67801550 67840263 - MGP_CBAJ_P0060683 Vmn2r3 protein_coding protein_coding MGP_CBAJ_T0013842.1 MGP_CBAJ_G0011954.1 mouse_genomes_project 3 51088596 51088952 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061784.1 MGP_CBAJ_G0027217.1 mouse_genomes_project 3 100453070 100485307 + MGP_CBAJ_P0061784 protein_coding protein_coding MGP_CBAJ_T0099199.1 MGP_CBAJ_G0037454.1 mouse_genomes_project 3 104435121 104435286 - Rnu1b2 snRNA snRNA MGP_CBAJ_T0063616.1 MGP_CBAJ_G0027606.1 mouse_genomes_project 3 151323183 151327762 + Adh4 protein_coding processed_transcript MGP_CBAJ_T0063617.1 MGP_CBAJ_G0027606.1 mouse_genomes_project 3 151323204 151338835 + MGP_CBAJ_P0063617 Adh4 protein_coding protein_coding MGP_CBAJ_T0063618.1 MGP_CBAJ_G0027606.1 mouse_genomes_project 3 151323212 151348068 + MGP_CBAJ_P0063618 Adh4 protein_coding protein_coding MGP_CBAJ_T0001138.1 MGP_CBAJ_G0001067.1 mouse_genomes_project 3 51012057 51013123 + TEC TEC MGP_CBAJ_T0098200.1 MGP_CBAJ_G0036473.1 mouse_genomes_project 3 66541640 66541782 + Gm22433 scaRNA scaRNA MGP_CBAJ_T0007515.1 MGP_CBAJ_G0006139.1 mouse_genomes_project 3 96895970 96898536 + Gm19710 lincRNA lincRNA MGP_CBAJ_T0007516.1 MGP_CBAJ_G0006139.1 mouse_genomes_project 3 96898325 96921108 + Gm19710 lincRNA lincRNA MGP_CBAJ_T0063598.1 MGP_CBAJ_G0027601.1 mouse_genomes_project 3 151018740 151037106 + MGP_CBAJ_P0063598 Trmt10a protein_coding protein_coding MGP_CBAJ_T0063599.1 MGP_CBAJ_G0027601.1 mouse_genomes_project 3 151018761 151031128 + Trmt10a protein_coding retained_intron MGP_CBAJ_T0063600.1 MGP_CBAJ_G0027601.1 mouse_genomes_project 3 151018809 151037103 + MGP_CBAJ_P0063600 Trmt10a protein_coding protein_coding MGP_CBAJ_T0063601.1 MGP_CBAJ_G0027601.1 mouse_genomes_project 3 151019091 151023665 + MGP_CBAJ_P0063601 Trmt10a protein_coding protein_coding MGP_CBAJ_T0063602.1 MGP_CBAJ_G0027601.1 mouse_genomes_project 3 151019153 151023767 + MGP_CBAJ_P0063602 Trmt10a protein_coding protein_coding MGP_CBAJ_T0063603.1 MGP_CBAJ_G0027601.1 mouse_genomes_project 3 151019202 151025786 + MGP_CBAJ_P0063603 Trmt10a protein_coding protein_coding MGP_CBAJ_T0061742.1 MGP_CBAJ_G0027181.1 mouse_genomes_project 3 99639103 99640359 + MGP_CBAJ_P0061742 Sprr2f protein_coding protein_coding MGP_CBAJ_T0060950.1 MGP_CBAJ_G0027021.1 mouse_genomes_project 3 88679920 88722695 - MGP_CBAJ_P0060950 Rbm46 protein_coding protein_coding MGP_CBAJ_T0060951.1 MGP_CBAJ_G0027021.1 mouse_genomes_project 3 88680507 88712864 - MGP_CBAJ_P0060951 Rbm46 protein_coding protein_coding MGP_CBAJ_T0060952.1 MGP_CBAJ_G0027021.1 mouse_genomes_project 3 88680510 88712864 - MGP_CBAJ_P0060952 Rbm46 protein_coding protein_coding MGP_CBAJ_T0061645.1 MGP_CBAJ_G0027150.1 mouse_genomes_project 3 97204067 97219542 + MGP_CBAJ_P0061645 Dennd4b protein_coding protein_coding MGP_CBAJ_T0061646.1 MGP_CBAJ_G0027150.1 mouse_genomes_project 3 97205396 97219542 + MGP_CBAJ_P0061646 Dennd4b protein_coding protein_coding MGP_CBAJ_T0061647.1 MGP_CBAJ_G0027150.1 mouse_genomes_project 3 97206343 97214517 + MGP_CBAJ_P0061647 Dennd4b protein_coding nonsense_mediated_decay MGP_CBAJ_T0061648.1 MGP_CBAJ_G0027150.1 mouse_genomes_project 3 97207898 97210580 + MGP_CBAJ_P0061648 Dennd4b protein_coding nonsense_mediated_decay MGP_CBAJ_T0061649.1 MGP_CBAJ_G0027150.1 mouse_genomes_project 3 97214334 97216351 + MGP_CBAJ_P0061649 Dennd4b protein_coding protein_coding MGP_CBAJ_T0061650.1 MGP_CBAJ_G0027150.1 mouse_genomes_project 3 97216275 97217216 + Dennd4b protein_coding retained_intron MGP_CBAJ_T0061651.1 MGP_CBAJ_G0027150.1 mouse_genomes_project 3 97216880 97217543 + Dennd4b protein_coding retained_intron MGP_CBAJ_T0061073.1 MGP_CBAJ_G0027054.1 mouse_genomes_project 3 93832524 93865279 + MGP_CBAJ_P0061073 Fcrl5 protein_coding protein_coding MGP_CBAJ_T0061074.1 MGP_CBAJ_G0027054.1 mouse_genomes_project 3 93832564 93900737 + MGP_CBAJ_P0061074 Fcrl5 protein_coding protein_coding MGP_CBAJ_T0061075.1 MGP_CBAJ_G0027054.1 mouse_genomes_project 3 93832636 93854968 + MGP_CBAJ_P0061075 Fcrl5 protein_coding protein_coding MGP_CBAJ_T0061076.1 MGP_CBAJ_G0027054.1 mouse_genomes_project 3 93832636 93854968 + MGP_CBAJ_P0061076 Fcrl5 protein_coding protein_coding MGP_CBAJ_T0061077.1 MGP_CBAJ_G0027054.1 mouse_genomes_project 3 93832636 93854968 + MGP_CBAJ_P0061077 Fcrl5 protein_coding protein_coding MGP_CBAJ_T0100436.1 MGP_CBAJ_G0038691.1 mouse_genomes_project 3 27328088 27328249 + Gm26040 snoRNA snoRNA MGP_CBAJ_T0060703.1 MGP_CBAJ_G0026966.1 mouse_genomes_project 3 69620774 69632824 - Ccnl1 protein_coding retained_intron MGP_CBAJ_T0060704.1 MGP_CBAJ_G0026966.1 mouse_genomes_project 3 69620774 69632874 - MGP_CBAJ_P0060704 Ccnl1 protein_coding protein_coding MGP_CBAJ_T0060705.1 MGP_CBAJ_G0026966.1 mouse_genomes_project 3 69620774 69632787 - MGP_CBAJ_P0060705 Ccnl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060706.1 MGP_CBAJ_G0026966.1 mouse_genomes_project 3 69620774 69632794 - MGP_CBAJ_P0060706 Ccnl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060707.1 MGP_CBAJ_G0026966.1 mouse_genomes_project 3 69620818 69632657 - MGP_CBAJ_P0060707 Ccnl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060708.1 MGP_CBAJ_G0026966.1 mouse_genomes_project 3 69621132 69632788 - Ccnl1 protein_coding retained_intron MGP_CBAJ_T0060709.1 MGP_CBAJ_G0026966.1 mouse_genomes_project 3 69621223 69626995 - MGP_CBAJ_P0060709 Ccnl1 protein_coding unknown_likely_coding MGP_CBAJ_T0060710.1 MGP_CBAJ_G0026966.1 mouse_genomes_project 3 69621405 69622623 - Ccnl1 protein_coding retained_intron MGP_CBAJ_T0060711.1 MGP_CBAJ_G0026966.1 mouse_genomes_project 3 69622578 69631481 - MGP_CBAJ_P0060711 Ccnl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060712.1 MGP_CBAJ_G0026966.1 mouse_genomes_project 3 69623132 69625603 - Ccnl1 protein_coding retained_intron MGP_CBAJ_T0060713.1 MGP_CBAJ_G0026966.1 mouse_genomes_project 3 69623516 69632806 - Ccnl1 protein_coding retained_intron MGP_CBAJ_T0060714.1 MGP_CBAJ_G0026966.1 mouse_genomes_project 3 69624525 69631514 - MGP_CBAJ_P0060714 Ccnl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060715.1 MGP_CBAJ_G0026966.1 mouse_genomes_project 3 69625031 69626493 - Ccnl1 protein_coding retained_intron MGP_CBAJ_T0060716.1 MGP_CBAJ_G0026966.1 mouse_genomes_project 3 69625873 69627618 - Ccnl1 protein_coding retained_intron MGP_CBAJ_T0060717.1 MGP_CBAJ_G0026966.1 mouse_genomes_project 3 69626058 69632278 - Ccnl1 protein_coding retained_intron MGP_CBAJ_T0060718.1 MGP_CBAJ_G0026966.1 mouse_genomes_project 3 69629870 69632528 - MGP_CBAJ_P0060718 Ccnl1 protein_coding unknown_likely_coding MGP_CBAJ_T0013886.1 MGP_CBAJ_G0011998.1 mouse_genomes_project 3 64015736 64016306 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007461.1 MGP_CBAJ_G0006101.1 mouse_genomes_project 3 64041494 64047845 + Gm38326 lincRNA lincRNA MGP_CBAJ_T0001198.1 MGP_CBAJ_G0001125.1 mouse_genomes_project 3 69646793 69648802 + TEC TEC MGP_CBAJ_T0007501.1 MGP_CBAJ_G0006136.1 mouse_genomes_project 3 94726321 94730831 + Gm3764 lincRNA lincRNA MGP_CBAJ_T0007502.1 MGP_CBAJ_G0006136.1 mouse_genomes_project 3 94726334 94749433 + Gm3764 lincRNA lincRNA MGP_CBAJ_T0007503.1 MGP_CBAJ_G0006136.1 mouse_genomes_project 3 94726814 94749990 + Gm3764 lincRNA lincRNA MGP_CBAJ_T0007504.1 MGP_CBAJ_G0006136.1 mouse_genomes_project 3 94729007 94748283 + Gm3764 lincRNA lincRNA MGP_CBAJ_T0007505.1 MGP_CBAJ_G0006136.1 mouse_genomes_project 3 94734020 94745855 + Gm3764 lincRNA lincRNA MGP_CBAJ_T0007506.1 MGP_CBAJ_G0006136.1 mouse_genomes_project 3 94734030 94750041 + Gm3764 lincRNA lincRNA MGP_CBAJ_T0007507.1 MGP_CBAJ_G0006136.1 mouse_genomes_project 3 94746658 94748297 + Gm3764 lincRNA lincRNA MGP_CBAJ_T0007508.1 MGP_CBAJ_G0006136.1 mouse_genomes_project 3 94748274 94753937 + Gm3764 lincRNA lincRNA MGP_CBAJ_T0007509.1 MGP_CBAJ_G0006136.1 mouse_genomes_project 3 94749927 94752004 + Gm3764 lincRNA lincRNA MGP_CBAJ_T0007510.1 MGP_CBAJ_G0006136.1 mouse_genomes_project 3 94752547 94753748 + Gm3764 lincRNA lincRNA MGP_CBAJ_T0007511.1 MGP_CBAJ_G0006136.1 mouse_genomes_project 3 94752762 94753937 + Gm3764 lincRNA lincRNA MGP_CBAJ_T0013776.1 MGP_CBAJ_G0011888.1 mouse_genomes_project 3 24169494 24169777 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001217.1 MGP_CBAJ_G0001144.1 mouse_genomes_project 3 91285605 91288850 - TEC TEC MGP_CBAJ_T0007562.1 MGP_CBAJ_G0006179.1 mouse_genomes_project 3 117883047 117885689 + lincRNA lincRNA MGP_CBAJ_T0001172.1 MGP_CBAJ_G0001099.1 mouse_genomes_project 3 55388915 55393091 + TEC TEC MGP_CBAJ_T0099182.1 MGP_CBAJ_G0037437.1 mouse_genomes_project 3 92156165 92156227 - Gm24501 snRNA snRNA MGP_CBAJ_T0098332.1 MGP_CBAJ_G0036598.1 mouse_genomes_project 3 109041445 109046660 - Gm43466 sense_intronic sense_intronic MGP_CBAJ_T0010435.1 MGP_CBAJ_G0008573.1 mouse_genomes_project 3 151454663 151454728 + Mir1956 miRNA miRNA MGP_CBAJ_T0064077.1 MGP_CBAJ_G0027686.1 mouse_genomes_project 3 172885870 172900061 + MGP_CBAJ_P0064077 Zranb2 protein_coding protein_coding MGP_CBAJ_T0064078.1 MGP_CBAJ_G0027686.1 mouse_genomes_project 3 172886069 172899987 + MGP_CBAJ_P0064078 Zranb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064079.1 MGP_CBAJ_G0027686.1 mouse_genomes_project 3 172886069 172899987 + MGP_CBAJ_P0064079 Zranb2 protein_coding protein_coding MGP_CBAJ_T0064080.1 MGP_CBAJ_G0027686.1 mouse_genomes_project 3 172886086 172894855 + MGP_CBAJ_P0064080 Zranb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064081.1 MGP_CBAJ_G0027686.1 mouse_genomes_project 3 172886098 172900027 + MGP_CBAJ_P0064081 Zranb2 protein_coding protein_coding MGP_CBAJ_T0064082.1 MGP_CBAJ_G0027686.1 mouse_genomes_project 3 172886135 172898574 + Zranb2 protein_coding retained_intron MGP_CBAJ_T0064083.1 MGP_CBAJ_G0027686.1 mouse_genomes_project 3 172890703 172893419 + Zranb2 protein_coding retained_intron MGP_CBAJ_T0064084.1 MGP_CBAJ_G0027686.1 mouse_genomes_project 3 172892304 172898454 + MGP_CBAJ_P0064084 Zranb2 protein_coding protein_coding MGP_CBAJ_T0059994.1 MGP_CBAJ_G0026830.1 mouse_genomes_project 3 32462873 32476984 + MGP_CBAJ_P0059994 Zfp639 protein_coding protein_coding MGP_CBAJ_T0059995.1 MGP_CBAJ_G0026830.1 mouse_genomes_project 3 32463149 32476894 + MGP_CBAJ_P0059995 Zfp639 protein_coding protein_coding MGP_CBAJ_T0059996.1 MGP_CBAJ_G0026830.1 mouse_genomes_project 3 32463278 32475717 + MGP_CBAJ_P0059996 Zfp639 protein_coding protein_coding MGP_CBAJ_T0059997.1 MGP_CBAJ_G0026830.1 mouse_genomes_project 3 32463510 32465790 + Zfp639 protein_coding processed_transcript MGP_CBAJ_T0059998.1 MGP_CBAJ_G0026830.1 mouse_genomes_project 3 32464792 32475780 + Zfp639 protein_coding retained_intron MGP_CBAJ_T0059999.1 MGP_CBAJ_G0026830.1 mouse_genomes_project 3 32465614 32475719 + MGP_CBAJ_P0059999 Zfp639 protein_coding protein_coding MGP_CBAJ_T0060000.1 MGP_CBAJ_G0026830.1 mouse_genomes_project 3 32471445 32476836 + MGP_CBAJ_P0060000 Zfp639 protein_coding protein_coding MGP_CBAJ_T0060001.1 MGP_CBAJ_G0026830.1 mouse_genomes_project 3 32473230 32476668 + MGP_CBAJ_P0060001 Zfp639 protein_coding protein_coding MGP_CBAJ_T0060002.1 MGP_CBAJ_G0026830.1 mouse_genomes_project 3 32474949 32475711 + Zfp639 protein_coding retained_intron MGP_CBAJ_T0059726.1 MGP_CBAJ_G0026771.1 mouse_genomes_project 3 13516950 13556193 - MGP_CBAJ_P0059726 Gm9733 protein_coding protein_coding MGP_CBAJ_T0004272.1 MGP_CBAJ_G0003732.1 mouse_genomes_project 3 132550847 132557763 + A530020G20Rik antisense antisense MGP_CBAJ_T0004273.1 MGP_CBAJ_G0003732.1 mouse_genomes_project 3 132550857 132551712 + A530020G20Rik antisense antisense MGP_CBAJ_T0004274.1 MGP_CBAJ_G0003732.1 mouse_genomes_project 3 132550907 132555173 + A530020G20Rik antisense antisense MGP_CBAJ_T0004326.1 MGP_CBAJ_G0003771.1 mouse_genomes_project 3 172228825 172250583 - Gm15577 antisense antisense MGP_CBAJ_T0014010.1 MGP_CBAJ_G0012122.1 mouse_genomes_project 3 104813423 104813903 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001189.1 MGP_CBAJ_G0001116.1 mouse_genomes_project 3 61653506 61654612 + TEC TEC MGP_CBAJ_T0007386.1 MGP_CBAJ_G0006045.1 mouse_genomes_project 3 29440058 29558276 - Gm33206 lincRNA lincRNA MGP_CBAJ_T0007667.1 MGP_CBAJ_G0006264.1 mouse_genomes_project 3 163909741 164025774 - Gm31121 lincRNA lincRNA MGP_CBAJ_T0059644.1 MGP_CBAJ_G0026746.1 mouse_genomes_project 3 6317119 6359746 - MGP_CBAJ_P0059644 Tpd52 protein_coding protein_coding MGP_CBAJ_T0059645.1 MGP_CBAJ_G0026746.1 mouse_genomes_project 3 6317248 6408204 - MGP_CBAJ_P0059645 Tpd52 protein_coding protein_coding MGP_CBAJ_T0059646.1 MGP_CBAJ_G0026746.1 mouse_genomes_project 3 6317287 6408220 - MGP_CBAJ_P0059646 Tpd52 protein_coding protein_coding MGP_CBAJ_T0059647.1 MGP_CBAJ_G0026746.1 mouse_genomes_project 3 6317395 6358083 - MGP_CBAJ_P0059647 Tpd52 protein_coding protein_coding MGP_CBAJ_T0059648.1 MGP_CBAJ_G0026746.1 mouse_genomes_project 3 6317470 6408259 - MGP_CBAJ_P0059648 Tpd52 protein_coding protein_coding MGP_CBAJ_T0059649.1 MGP_CBAJ_G0026746.1 mouse_genomes_project 3 6335252 6389918 - MGP_CBAJ_P0059649 Tpd52 protein_coding protein_coding MGP_CBAJ_T0059650.1 MGP_CBAJ_G0026746.1 mouse_genomes_project 3 6338060 6408218 - Tpd52 protein_coding processed_transcript MGP_CBAJ_T0059651.1 MGP_CBAJ_G0026746.1 mouse_genomes_project 3 6338122 6408259 - MGP_CBAJ_P0059651 Tpd52 protein_coding nonsense_mediated_decay MGP_CBAJ_T0100444.1 MGP_CBAJ_G0038699.1 mouse_genomes_project 3 48751893 48752031 + Gm23891 snoRNA snoRNA MGP_CBAJ_T0062652.1 MGP_CBAJ_G0027411.1 mouse_genomes_project 3 115782227 115829806 - MGP_CBAJ_P0062652 Cept1 protein_coding protein_coding MGP_CBAJ_T0062653.1 MGP_CBAJ_G0027411.1 mouse_genomes_project 3 115782950 115829586 - MGP_CBAJ_P0062653 Cept1 protein_coding protein_coding MGP_CBAJ_T0062654.1 MGP_CBAJ_G0027411.1 mouse_genomes_project 3 115782950 115829735 - MGP_CBAJ_P0062654 Cept1 protein_coding protein_coding MGP_CBAJ_T0062655.1 MGP_CBAJ_G0027411.1 mouse_genomes_project 3 115785221 115829703 - MGP_CBAJ_P0062655 Cept1 protein_coding protein_coding MGP_CBAJ_T0062656.1 MGP_CBAJ_G0027411.1 mouse_genomes_project 3 115802320 115829747 - MGP_CBAJ_P0062656 Cept1 protein_coding protein_coding MGP_CBAJ_T0062657.1 MGP_CBAJ_G0027411.1 mouse_genomes_project 3 115812464 115829722 - MGP_CBAJ_P0062657 Cept1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062658.1 MGP_CBAJ_G0027411.1 mouse_genomes_project 3 115820348 115829596 - MGP_CBAJ_P0062658 Cept1 protein_coding protein_coding MGP_CBAJ_T0063350.1 MGP_CBAJ_G0027551.1 mouse_genomes_project 3 141865987 141882298 + MGP_CBAJ_P0063350 Cfi protein_coding protein_coding MGP_CBAJ_T0063351.1 MGP_CBAJ_G0027551.1 mouse_genomes_project 3 141866843 141916728 + MGP_CBAJ_P0063351 Cfi protein_coding protein_coding MGP_CBAJ_T0001286.1 MGP_CBAJ_G0001213.1 mouse_genomes_project 3 138328742 138330650 + TEC TEC MGP_CBAJ_T0063657.1 MGP_CBAJ_G0027614.1 mouse_genomes_project 3 154803154 155199775 + MGP_CBAJ_P0063657 Unc5c protein_coding protein_coding MGP_CBAJ_T0063658.1 MGP_CBAJ_G0027614.1 mouse_genomes_project 3 154803512 155194319 + MGP_CBAJ_P0063658 Unc5c protein_coding protein_coding MGP_CBAJ_T0063659.1 MGP_CBAJ_G0027614.1 mouse_genomes_project 3 154803537 155021074 + Unc5c protein_coding processed_transcript MGP_CBAJ_T0063660.1 MGP_CBAJ_G0027614.1 mouse_genomes_project 3 154803537 154808876 + Unc5c protein_coding retained_intron MGP_CBAJ_T0063661.1 MGP_CBAJ_G0027614.1 mouse_genomes_project 3 154803537 155044956 + Unc5c protein_coding retained_intron MGP_CBAJ_T0063662.1 MGP_CBAJ_G0027614.1 mouse_genomes_project 3 154803537 155194271 + MGP_CBAJ_P0063662 Unc5c protein_coding protein_coding MGP_CBAJ_T0063663.1 MGP_CBAJ_G0027614.1 mouse_genomes_project 3 154803609 155195388 + MGP_CBAJ_P0063663 Unc5c protein_coding nonsense_mediated_decay MGP_CBAJ_T0063664.1 MGP_CBAJ_G0027614.1 mouse_genomes_project 3 155153020 155155182 + Unc5c protein_coding retained_intron MGP_CBAJ_T0001305.1 MGP_CBAJ_G0001231.1 mouse_genomes_project 3 141345513 141348961 + TEC TEC MGP_CBAJ_T0001094.1 MGP_CBAJ_G0001023.1 mouse_genomes_project 3 30202714 30203582 + TEC TEC MGP_CBAJ_T0010394.1 MGP_CBAJ_G0008532.1 mouse_genomes_project 3 86278826 86278937 - Gm25749 miRNA miRNA MGP_CBAJ_T0060493.1 MGP_CBAJ_G0026914.1 mouse_genomes_project 3 57744872 57772278 + MGP_CBAJ_P0060493 Sohlh2 protein_coding protein_coding MGP_CBAJ_T0062698.1 MGP_CBAJ_G0027424.1 mouse_genomes_project 3 116702682 116710909 - MGP_CBAJ_P0062698 Rbm15 protein_coding protein_coding MGP_CBAJ_T0062699.1 MGP_CBAJ_G0027424.1 mouse_genomes_project 3 116704391 116710337 - Rbm15 protein_coding retained_intron MGP_CBAJ_T0014042.1 MGP_CBAJ_G0012154.1 mouse_genomes_project 3 113968078 113968333 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098325.1 MGP_CBAJ_G0036591.1 mouse_genomes_project 3 102203782 102205941 - Gm43773 sense_intronic sense_intronic MGP_CBAJ_T0001272.1 MGP_CBAJ_G0001199.1 mouse_genomes_project 3 134408194 134408794 - TEC TEC MGP_CBAJ_T0007588.1 MGP_CBAJ_G0006197.1 mouse_genomes_project 3 135552035 135641179 + Gm43731 lincRNA lincRNA MGP_CBAJ_T0099218.1 MGP_CBAJ_G0037473.1 mouse_genomes_project 3 144088817 144088911 + Gm26103 snRNA snRNA MGP_CBAJ_T0004178.1 MGP_CBAJ_G0003673.1 mouse_genomes_project 3 69484193 69532532 - Gm37359 antisense antisense MGP_CBAJ_T0062001.1 MGP_CBAJ_G0027262.1 mouse_genomes_project 3 103191471 103204731 - MGP_CBAJ_P0062001 Anxa9 protein_coding protein_coding MGP_CBAJ_T0062002.1 MGP_CBAJ_G0027262.1 mouse_genomes_project 3 103191471 103205103 - MGP_CBAJ_P0062002 Anxa9 protein_coding protein_coding MGP_CBAJ_T0062003.1 MGP_CBAJ_G0027262.1 mouse_genomes_project 3 103191673 103204731 - MGP_CBAJ_P0062003 Anxa9 protein_coding protein_coding MGP_CBAJ_T0062004.1 MGP_CBAJ_G0027262.1 mouse_genomes_project 3 103203859 103204731 - MGP_CBAJ_P0062004 Anxa9 protein_coding protein_coding MGP_CBAJ_T0013805.1 MGP_CBAJ_G0011917.1 mouse_genomes_project 3 37538460 37539156 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101879.1 MGP_CBAJ_G0039910.1 mouse_genomes_project 3 170666012 170666883 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0062507.1 MGP_CBAJ_G0027376.1 mouse_genomes_project 3 112738937 112751471 + MGP_CBAJ_P0062507 protein_coding protein_coding MGP_CBAJ_T0062509.1 MGP_CBAJ_G0027376.1 mouse_genomes_project 3 112739010 112751276 + MGP_CBAJ_P0062509 protein_coding protein_coding MGP_CBAJ_T0062510.1 MGP_CBAJ_G0027376.1 mouse_genomes_project 3 112739017 112751471 + MGP_CBAJ_P0062510 protein_coding protein_coding MGP_CBAJ_T0062511.1 MGP_CBAJ_G0027376.1 mouse_genomes_project 3 112739045 112751473 + MGP_CBAJ_P0062511 protein_coding protein_coding MGP_CBAJ_T0062512.1 MGP_CBAJ_G0027376.1 mouse_genomes_project 3 112739253 112751209 + MGP_CBAJ_P0062512 protein_coding protein_coding MGP_CBAJ_T0062513.1 MGP_CBAJ_G0027376.1 mouse_genomes_project 3 112739281 112744305 + protein_coding processed_transcript MGP_CBAJ_T0062514.1 MGP_CBAJ_G0027376.1 mouse_genomes_project 3 112744494 112750132 + MGP_CBAJ_P0062514 protein_coding nonsense_mediated_decay MGP_CBAJ_T0013993.1 MGP_CBAJ_G0012105.1 mouse_genomes_project 3 100970774 100971262 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060608.1 MGP_CBAJ_G0026944.1 mouse_genomes_project 3 63144124 63161405 + Aadac protein_coding processed_transcript MGP_CBAJ_T0060609.1 MGP_CBAJ_G0026944.1 mouse_genomes_project 3 63151800 63163061 + MGP_CBAJ_P0060609 Aadac protein_coding protein_coding MGP_CBAJ_T0060610.1 MGP_CBAJ_G0026944.1 mouse_genomes_project 3 63151915 63158462 + Aadac protein_coding retained_intron MGP_CBAJ_T0014184.1 MGP_CBAJ_G0012296.1 mouse_genomes_project 3 167632364 167634496 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0059643.1 MGP_CBAJ_G0026745.1 mouse_genomes_project 3 6164564 6309998 - MGP_CBAJ_P0059643 Mrps28 protein_coding protein_coding MGP_CBAJ_T0001344.1 MGP_CBAJ_G0001270.1 mouse_genomes_project 3 167187578 167190659 - TEC TEC MGP_CBAJ_T0013855.1 MGP_CBAJ_G0011967.1 mouse_genomes_project 3 53757356 53757789 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014072.1 MGP_CBAJ_G0012184.1 mouse_genomes_project 3 123860390 123861544 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004214.1 MGP_CBAJ_G0003700.1 mouse_genomes_project 3 103205002 103217544 - 6330562C20Rik antisense antisense MGP_CBAJ_T0004215.1 MGP_CBAJ_G0003700.1 mouse_genomes_project 3 103205589 103217593 - 6330562C20Rik antisense antisense MGP_CBAJ_T0004216.1 MGP_CBAJ_G0003700.1 mouse_genomes_project 3 103213857 103217603 - 6330562C20Rik antisense antisense MGP_CBAJ_T0062894.1 MGP_CBAJ_G0027468.1 mouse_genomes_project 3 118588043 118667127 - MGP_CBAJ_P0062894 Fam102b protein_coding protein_coding MGP_CBAJ_T0060124.1 MGP_CBAJ_G0026848.1 mouse_genomes_project 3 36515880 36535197 + MGP_CBAJ_P0060124 D3Ertd254e protein_coding protein_coding MGP_CBAJ_T0060125.1 MGP_CBAJ_G0026848.1 mouse_genomes_project 3 36516025 36527529 + MGP_CBAJ_P0060125 D3Ertd254e protein_coding protein_coding MGP_CBAJ_T0060126.1 MGP_CBAJ_G0026848.1 mouse_genomes_project 3 36524376 36535190 + MGP_CBAJ_P0060126 D3Ertd254e protein_coding protein_coding MGP_CBAJ_T0060638.1 MGP_CBAJ_G0026949.1 mouse_genomes_project 3 64638966 64642668 - MGP_CBAJ_P0060638 B430305J03Rik protein_coding protein_coding MGP_CBAJ_T0007435.1 MGP_CBAJ_G0006082.1 mouse_genomes_project 3 50937961 50958792 + Gm31415 lincRNA lincRNA MGP_CBAJ_T0010380.1 MGP_CBAJ_G0008518.1 mouse_genomes_project 3 30826757 30826820 + Mir7008 miRNA miRNA MGP_CBAJ_T0013762.1 MGP_CBAJ_G0011874.1 mouse_genomes_project 3 18243589 18244337 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100482.1 MGP_CBAJ_G0038737.1 mouse_genomes_project 3 125093032 125093164 - Gm23750 snoRNA snoRNA MGP_CBAJ_T0060032.1 MGP_CBAJ_G0026835.1 mouse_genomes_project 3 32729806 32744513 + MGP_CBAJ_P0060032 Ndufb5 protein_coding protein_coding MGP_CBAJ_T0060033.1 MGP_CBAJ_G0026835.1 mouse_genomes_project 3 32729811 32732936 + Ndufb5 protein_coding retained_intron MGP_CBAJ_T0060034.1 MGP_CBAJ_G0026835.1 mouse_genomes_project 3 32729817 32747178 + MGP_CBAJ_P0060034 Ndufb5 protein_coding protein_coding MGP_CBAJ_T0060035.1 MGP_CBAJ_G0026835.1 mouse_genomes_project 3 32729841 32746859 + MGP_CBAJ_P0060035 Ndufb5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060036.1 MGP_CBAJ_G0026835.1 mouse_genomes_project 3 32729842 32744084 + MGP_CBAJ_P0060036 Ndufb5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060037.1 MGP_CBAJ_G0026835.1 mouse_genomes_project 3 32734328 32746715 + MGP_CBAJ_P0060037 Ndufb5 protein_coding protein_coding MGP_CBAJ_T0014085.1 MGP_CBAJ_G0012197.1 mouse_genomes_project 3 127786037 127786415 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007418.1 MGP_CBAJ_G0006072.1 mouse_genomes_project 3 39226328 39227636 + Gm43538 lincRNA lincRNA MGP_CBAJ_T0014043.1 MGP_CBAJ_G0012155.1 mouse_genomes_project 3 115101082 115108662 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0060380.1 MGP_CBAJ_G0026892.1 mouse_genomes_project 3 53783711 53808115 + Mgst2 protein_coding processed_transcript MGP_CBAJ_T0060381.1 MGP_CBAJ_G0026892.1 mouse_genomes_project 3 53784532 53803270 + Mgst2 protein_coding processed_transcript MGP_CBAJ_T0060382.1 MGP_CBAJ_G0026892.1 mouse_genomes_project 3 53784533 53808984 + MGP_CBAJ_P0060382 Mgst2 protein_coding protein_coding MGP_CBAJ_T0060383.1 MGP_CBAJ_G0026892.1 mouse_genomes_project 3 53784568 53808984 + MGP_CBAJ_P0060383 Mgst2 protein_coding protein_coding MGP_CBAJ_T0060384.1 MGP_CBAJ_G0026892.1 mouse_genomes_project 3 53784579 53808978 + MGP_CBAJ_P0060384 Mgst2 protein_coding protein_coding MGP_CBAJ_T0060385.1 MGP_CBAJ_G0026892.1 mouse_genomes_project 3 53794794 53808980 + Mgst2 protein_coding processed_transcript MGP_CBAJ_T0060386.1 MGP_CBAJ_G0026892.1 mouse_genomes_project 3 53795246 53808827 + Mgst2 protein_coding processed_transcript MGP_CBAJ_T0060387.1 MGP_CBAJ_G0026892.1 mouse_genomes_project 3 53801341 53808983 + Mgst2 protein_coding retained_intron MGP_CBAJ_T0060388.1 MGP_CBAJ_G0026892.1 mouse_genomes_project 3 53807924 53808986 + Mgst2 protein_coding retained_intron MGP_CBAJ_T0063435.1 MGP_CBAJ_G0027570.1 mouse_genomes_project 3 145167828 145236352 - MGP_CBAJ_P0063435 Npnt protein_coding protein_coding MGP_CBAJ_T0063436.1 MGP_CBAJ_G0027570.1 mouse_genomes_project 3 145167845 145236104 - MGP_CBAJ_P0063436 Npnt protein_coding protein_coding MGP_CBAJ_T0063437.1 MGP_CBAJ_G0027570.1 mouse_genomes_project 3 145168766 145236221 - MGP_CBAJ_P0063437 Npnt protein_coding protein_coding MGP_CBAJ_T0063438.1 MGP_CBAJ_G0027570.1 mouse_genomes_project 3 145170513 145236104 - MGP_CBAJ_P0063438 Npnt protein_coding protein_coding MGP_CBAJ_T0063439.1 MGP_CBAJ_G0027570.1 mouse_genomes_project 3 145170513 145236104 - MGP_CBAJ_P0063439 Npnt protein_coding protein_coding MGP_CBAJ_T0063440.1 MGP_CBAJ_G0027570.1 mouse_genomes_project 3 145177252 145192426 - Npnt protein_coding retained_intron MGP_CBAJ_T0059674.1 MGP_CBAJ_G0026756.1 mouse_genomes_project 3 7937683 7957230 - MGP_CBAJ_P0059674 Impa1 protein_coding protein_coding MGP_CBAJ_T0059675.1 MGP_CBAJ_G0026756.1 mouse_genomes_project 3 7939675 7957149 - MGP_CBAJ_P0059675 Impa1 protein_coding protein_coding MGP_CBAJ_T0059676.1 MGP_CBAJ_G0026756.1 mouse_genomes_project 3 7939681 7957230 - MGP_CBAJ_P0059676 Impa1 protein_coding protein_coding MGP_CBAJ_T0059677.1 MGP_CBAJ_G0026756.1 mouse_genomes_project 3 7940845 7942380 - Impa1 protein_coding retained_intron MGP_CBAJ_T0059679.1 MGP_CBAJ_G0026756.1 mouse_genomes_project 3 7951972 7956923 - MGP_CBAJ_P0059679 Impa1 protein_coding protein_coding MGP_CBAJ_T0060605.1 MGP_CBAJ_G0026941.1 mouse_genomes_project 3 62936268 62952542 + protein_coding unprocessed_pseudogene MGP_CBAJ_T0062803.1 MGP_CBAJ_G0027452.1 mouse_genomes_project 3 117918379 117922719 + MGP_CBAJ_P0062803 Psrc1 protein_coding protein_coding MGP_CBAJ_T0062804.1 MGP_CBAJ_G0027452.1 mouse_genomes_project 3 117918391 117919949 + Psrc1 protein_coding processed_transcript MGP_CBAJ_T0062805.1 MGP_CBAJ_G0027452.1 mouse_genomes_project 3 117918392 117921143 + Psrc1 protein_coding processed_transcript MGP_CBAJ_T0062806.1 MGP_CBAJ_G0027452.1 mouse_genomes_project 3 117918399 117922771 + MGP_CBAJ_P0062806 Psrc1 protein_coding protein_coding MGP_CBAJ_T0062807.1 MGP_CBAJ_G0027452.1 mouse_genomes_project 3 117918419 117920924 + Psrc1 protein_coding processed_transcript MGP_CBAJ_T0062808.1 MGP_CBAJ_G0027452.1 mouse_genomes_project 3 117918456 117919950 + MGP_CBAJ_P0062808 Psrc1 protein_coding protein_coding MGP_CBAJ_T0062809.1 MGP_CBAJ_G0027452.1 mouse_genomes_project 3 117918477 117921163 + Psrc1 protein_coding processed_transcript MGP_CBAJ_T0062810.1 MGP_CBAJ_G0027452.1 mouse_genomes_project 3 117918934 117920485 + Psrc1 protein_coding retained_intron MGP_CBAJ_T0062811.1 MGP_CBAJ_G0027452.1 mouse_genomes_project 3 117919394 117921414 + Psrc1 protein_coding retained_intron MGP_CBAJ_T0062812.1 MGP_CBAJ_G0027452.1 mouse_genomes_project 3 117919397 117921245 + Psrc1 protein_coding retained_intron MGP_CBAJ_T0062813.1 MGP_CBAJ_G0027452.1 mouse_genomes_project 3 117920605 117921253 + Psrc1 protein_coding processed_transcript MGP_CBAJ_T0004147.1 MGP_CBAJ_G0003648.1 mouse_genomes_project 3 36577817 36580152 + Gm43255 antisense antisense MGP_CBAJ_T0098498.1 MGP_CBAJ_G0036754.1 mouse_genomes_project 3 169746041 169769459 + Gm38139 sense_overlapping sense_overlapping MGP_CBAJ_T0059857.1 MGP_CBAJ_G0026801.1 mouse_genomes_project 3 26676191 26703452 + MGP_CBAJ_P0059857 Tnfsf10 protein_coding protein_coding MGP_CBAJ_T0059858.1 MGP_CBAJ_G0026801.1 mouse_genomes_project 3 26676224 26706121 + MGP_CBAJ_P0059858 Tnfsf10 protein_coding protein_coding MGP_CBAJ_T0013888.1 MGP_CBAJ_G0012000.1 mouse_genomes_project 3 64561016 64561308 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098377.1 MGP_CBAJ_G0036643.1 mouse_genomes_project 3 141155243 141156719 + Gm27195 sense_intronic sense_intronic MGP_CBAJ_T0101876.1 MGP_CBAJ_G0039907.1 mouse_genomes_project 3 123286380 123308712 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0059894.1 MGP_CBAJ_G0026808.1 mouse_genomes_project 3 28309621 28315416 - MGP_CBAJ_P0059894 Yae1d1 protein_coding protein_coding MGP_CBAJ_T0061753.1 MGP_CBAJ_G0027191.1 mouse_genomes_project 3 99883847 99886594 - MGP_CBAJ_P0061753 Ivl protein_coding protein_coding MGP_CBAJ_T0062966.1 MGP_CBAJ_G0027484.1 mouse_genomes_project 3 126652174 126656028 - MGP_CBAJ_P0062966 Gpr88 protein_coding protein_coding MGP_CBAJ_T0062967.1 MGP_CBAJ_G0027484.1 mouse_genomes_project 3 126655083 126655614 - MGP_CBAJ_P0062967 Gpr88 protein_coding protein_coding MGP_CBAJ_T0062968.1 MGP_CBAJ_G0027484.1 mouse_genomes_project 3 126655196 126655988 - Gpr88 protein_coding processed_transcript MGP_CBAJ_T0061118.1 MGP_CBAJ_G0027061.1 mouse_genomes_project 3 94288156 94294181 + MGP_CBAJ_P0061118 Sh2d2a protein_coding protein_coding MGP_CBAJ_T0061119.1 MGP_CBAJ_G0027061.1 mouse_genomes_project 3 94288406 94297155 + MGP_CBAJ_P0061119 Sh2d2a protein_coding protein_coding MGP_CBAJ_T0061120.1 MGP_CBAJ_G0027061.1 mouse_genomes_project 3 94288412 94291346 + Sh2d2a protein_coding retained_intron MGP_CBAJ_T0059771.1 MGP_CBAJ_G0026787.1 mouse_genomes_project 3 18356339 18358335 - MGP_CBAJ_P0059771 Crh protein_coding protein_coding MGP_CBAJ_T0007423.1 MGP_CBAJ_G0006076.1 mouse_genomes_project 3 42134134 42149200 + Gm30852 lincRNA lincRNA MGP_CBAJ_T0007424.1 MGP_CBAJ_G0006076.1 mouse_genomes_project 3 42147686 42178624 + Gm30852 lincRNA lincRNA MGP_CBAJ_T0001340.1 MGP_CBAJ_G0001266.1 mouse_genomes_project 3 167031824 167034596 - TEC TEC MGP_CBAJ_T0063008.1 MGP_CBAJ_G0027492.1 mouse_genomes_project 3 127091857 127135912 - MGP_CBAJ_P0063008 Gm43191 protein_coding protein_coding MGP_CBAJ_T0007657.1 MGP_CBAJ_G0006257.1 mouse_genomes_project 3 161203979 161239305 + Gm29771 lincRNA lincRNA MGP_CBAJ_T0014019.1 MGP_CBAJ_G0012131.1 mouse_genomes_project 3 108014998 108015653 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060754.1 MGP_CBAJ_G0026977.1 mouse_genomes_project 3 71735819 72562939 + MGP_CBAJ_P0060754 Gm21949 protein_coding protein_coding MGP_CBAJ_T0001319.1 MGP_CBAJ_G0001245.1 mouse_genomes_project 3 145360510 145362236 - TEC TEC MGP_CBAJ_T0062184.1 MGP_CBAJ_G0027302.1 mouse_genomes_project 3 104732462 104763661 + MGP_CBAJ_P0062184 Lix1l protein_coding protein_coding MGP_CBAJ_T0062185.1 MGP_CBAJ_G0027302.1 mouse_genomes_project 3 104755907 104759719 + Lix1l protein_coding retained_intron MGP_CBAJ_T0062528.1 MGP_CBAJ_G0027380.1 mouse_genomes_project 3 112845505 112900024 + MGP_CBAJ_P0062528 Rsbn1 protein_coding protein_coding MGP_CBAJ_T0062529.1 MGP_CBAJ_G0027380.1 mouse_genomes_project 3 112845536 112900047 + MGP_CBAJ_P0062529 Rsbn1 protein_coding protein_coding MGP_CBAJ_T0062530.1 MGP_CBAJ_G0027380.1 mouse_genomes_project 3 112845952 112897282 + MGP_CBAJ_P0062530 Rsbn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062531.1 MGP_CBAJ_G0027380.1 mouse_genomes_project 3 112859330 112893547 + MGP_CBAJ_P0062531 Rsbn1 protein_coding protein_coding MGP_CBAJ_T0062619.1 MGP_CBAJ_G0027401.1 mouse_genomes_project 3 115084197 115101598 - MGP_CBAJ_P0062619 Atp5f1 protein_coding protein_coding MGP_CBAJ_T0062620.1 MGP_CBAJ_G0027401.1 mouse_genomes_project 3 115084201 115100775 - MGP_CBAJ_P0062620 Atp5f1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062621.1 MGP_CBAJ_G0027401.1 mouse_genomes_project 3 115084397 115095681 - MGP_CBAJ_P0062621 Atp5f1 protein_coding protein_coding MGP_CBAJ_T0062622.1 MGP_CBAJ_G0027401.1 mouse_genomes_project 3 115095169 115100763 - Atp5f1 protein_coding retained_intron MGP_CBAJ_T0062623.1 MGP_CBAJ_G0027401.1 mouse_genomes_project 3 115095326 115097506 - Atp5f1 protein_coding retained_intron MGP_CBAJ_T0062624.1 MGP_CBAJ_G0027401.1 mouse_genomes_project 3 115100089 115100745 - Atp5f1 protein_coding retained_intron MGP_CBAJ_T0062375.1 MGP_CBAJ_G0027352.1 mouse_genomes_project 3 110201447 110229935 - MGP_CBAJ_P0062375 Atp1a1 protein_coding protein_coding MGP_CBAJ_T0062376.1 MGP_CBAJ_G0027352.1 mouse_genomes_project 3 110201544 110202791 - Atp1a1 protein_coding retained_intron MGP_CBAJ_T0062377.1 MGP_CBAJ_G0027352.1 mouse_genomes_project 3 110211020 110214262 - Atp1a1 protein_coding retained_intron MGP_CBAJ_T0060833.1 MGP_CBAJ_G0026996.1 mouse_genomes_project 3 80134225 80170310 - MGP_CBAJ_P0060833 Serpini2 protein_coding protein_coding MGP_CBAJ_T0098376.1 MGP_CBAJ_G0036642.1 mouse_genomes_project 3 130588586 130591826 - Gm42664 sense_intronic sense_intronic MGP_CBAJ_T0061540.1 MGP_CBAJ_G0027136.1 mouse_genomes_project 3 96687977 96715052 + MGP_CBAJ_P0061540 She protein_coding protein_coding MGP_CBAJ_T0061541.1 MGP_CBAJ_G0027136.1 mouse_genomes_project 3 96694108 96695596 + She protein_coding retained_intron MGP_CBAJ_T0007353.1 MGP_CBAJ_G0006022.1 mouse_genomes_project 3 7286939 7335006 + lincRNA lincRNA MGP_CBAJ_T0101114.1 MGP_CBAJ_G0039312.1 mouse_genomes_project 3 156462269 156462765 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0060327.1 MGP_CBAJ_G0026882.1 mouse_genomes_project 3 47872081 47878094 - MGP_CBAJ_P0060327 Pabpc4l protein_coding protein_coding MGP_CBAJ_T0060328.1 MGP_CBAJ_G0026882.1 mouse_genomes_project 3 47872081 47877816 - MGP_CBAJ_P0060328 Pabpc4l protein_coding protein_coding MGP_CBAJ_T0060329.1 MGP_CBAJ_G0026882.1 mouse_genomes_project 3 47876566 47877816 - MGP_CBAJ_P0060329 Pabpc4l protein_coding protein_coding MGP_CBAJ_T0060330.1 MGP_CBAJ_G0026882.1 mouse_genomes_project 3 47876930 47877795 - MGP_CBAJ_P0060330 Pabpc4l protein_coding protein_coding MGP_CBAJ_T0060684.1 MGP_CBAJ_G0026962.1 mouse_genomes_project 3 68724868 68982892 + Kcnab1 protein_coding processed_transcript MGP_CBAJ_T0060685.1 MGP_CBAJ_G0026962.1 mouse_genomes_project 3 68724868 68995376 + MGP_CBAJ_P0060685 Kcnab1 protein_coding protein_coding MGP_CBAJ_T0060686.1 MGP_CBAJ_G0026962.1 mouse_genomes_project 3 68803068 68995380 + Kcnab1 protein_coding processed_transcript MGP_CBAJ_T0060687.1 MGP_CBAJ_G0026962.1 mouse_genomes_project 3 68863037 68994241 + Kcnab1 protein_coding processed_transcript MGP_CBAJ_T0060688.1 MGP_CBAJ_G0026962.1 mouse_genomes_project 3 68905926 68974179 + Kcnab1 protein_coding processed_transcript MGP_CBAJ_T0060689.1 MGP_CBAJ_G0026962.1 mouse_genomes_project 3 68970844 68975913 + Kcnab1 protein_coding retained_intron MGP_CBAJ_T0061033.1 MGP_CBAJ_G0027044.1 mouse_genomes_project 3 92191687 92200395 - MGP_CBAJ_P0061033 Prss48 protein_coding protein_coding MGP_CBAJ_T0062168.1 MGP_CBAJ_G0027295.1 mouse_genomes_project 3 104339633 104349695 - MGP_CBAJ_P0062168 Fcgr1 protein_coding protein_coding MGP_CBAJ_T0062169.1 MGP_CBAJ_G0027295.1 mouse_genomes_project 3 104341192 104349216 - MGP_CBAJ_P0062169 Fcgr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0001121.1 MGP_CBAJ_G0001050.1 mouse_genomes_project 3 38531077 38531633 + TEC TEC MGP_CBAJ_T0101855.1 MGP_CBAJ_G0039886.1 mouse_genomes_project 3 93956350 93956875 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0098320.1 MGP_CBAJ_G0036587.1 mouse_genomes_project 3 85131411 85141241 - sense_intronic sense_intronic MGP_CBAJ_T0004263.1 MGP_CBAJ_G0003723.1 mouse_genomes_project 3 117763563 117771640 - 1700010K24Rik antisense antisense MGP_CBAJ_T0061083.1 MGP_CBAJ_G0027056.1 mouse_genomes_project 3 94026862 94118532 + Arhgef11 protein_coding retained_intron MGP_CBAJ_T0061084.1 MGP_CBAJ_G0027056.1 mouse_genomes_project 3 94026878 94164350 + MGP_CBAJ_P0061084 Arhgef11 protein_coding protein_coding MGP_CBAJ_T0061085.1 MGP_CBAJ_G0027056.1 mouse_genomes_project 3 94026888 94162226 + MGP_CBAJ_P0061085 Arhgef11 protein_coding protein_coding MGP_CBAJ_T0061086.1 MGP_CBAJ_G0027056.1 mouse_genomes_project 3 94026895 94140133 + Arhgef11 protein_coding retained_intron MGP_CBAJ_T0061087.1 MGP_CBAJ_G0027056.1 mouse_genomes_project 3 94027404 94164351 + MGP_CBAJ_P0061087 Arhgef11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061088.1 MGP_CBAJ_G0027056.1 mouse_genomes_project 3 94028079 94163419 + MGP_CBAJ_P0061088 Arhgef11 protein_coding unknown_likely_coding MGP_CBAJ_T0101840.1 MGP_CBAJ_G0039871.1 mouse_genomes_project 3 20477314 20479013 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0063191.1 MGP_CBAJ_G0027527.1 mouse_genomes_project 3 134795698 134952017 - MGP_CBAJ_P0063191 Ndst3 protein_coding protein_coding MGP_CBAJ_T0063192.1 MGP_CBAJ_G0027527.1 mouse_genomes_project 3 134795704 134966694 - MGP_CBAJ_P0063192 Ndst3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063193.1 MGP_CBAJ_G0027527.1 mouse_genomes_project 3 134795706 134966694 - MGP_CBAJ_P0063193 Ndst3 protein_coding protein_coding MGP_CBAJ_T0063194.1 MGP_CBAJ_G0027527.1 mouse_genomes_project 3 134795707 134952101 - MGP_CBAJ_P0063194 Ndst3 protein_coding protein_coding MGP_CBAJ_T0063195.1 MGP_CBAJ_G0027527.1 mouse_genomes_project 3 134798096 134892094 - MGP_CBAJ_P0063195 Ndst3 protein_coding protein_coding MGP_CBAJ_T0063196.1 MGP_CBAJ_G0027527.1 mouse_genomes_project 3 134798225 134966122 - MGP_CBAJ_P0063196 Ndst3 protein_coding protein_coding MGP_CBAJ_T0063197.1 MGP_CBAJ_G0027527.1 mouse_genomes_project 3 134822626 134952286 - Ndst3 protein_coding retained_intron MGP_CBAJ_T0063198.1 MGP_CBAJ_G0027527.1 mouse_genomes_project 3 134826461 134829921 - Ndst3 protein_coding retained_intron MGP_CBAJ_T0063199.1 MGP_CBAJ_G0027527.1 mouse_genomes_project 3 134826632 134845398 - Ndst3 protein_coding processed_transcript MGP_CBAJ_T0013703.1 MGP_CBAJ_G0011815.1 mouse_genomes_project 3 573973 574289 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001102.1 MGP_CBAJ_G0001031.1 mouse_genomes_project 3 33447689 33449155 - TEC TEC MGP_CBAJ_T0059743.1 MGP_CBAJ_G0026780.1 mouse_genomes_project 3 17122786 17124387 + MGP_CBAJ_P0059743 protein_coding protein_coding MGP_CBAJ_T0014044.1 MGP_CBAJ_G0012156.1 mouse_genomes_project 3 115186923 115189104 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061746.1 MGP_CBAJ_G0027184.1 mouse_genomes_project 3 99699221 99700536 + MGP_CBAJ_P0061746 Sprr2j-ps protein_coding protein_coding MGP_CBAJ_T0062718.1 MGP_CBAJ_G0027430.1 mouse_genomes_project 3 117049836 117051900 + MGP_CBAJ_P0062718 Gm10961 protein_coding protein_coding MGP_CBAJ_T0063292.1 MGP_CBAJ_G0027541.1 mouse_genomes_project 3 139563948 139572523 + MGP_CBAJ_P0063292 Tifa protein_coding protein_coding MGP_CBAJ_T0063293.1 MGP_CBAJ_G0027541.1 mouse_genomes_project 3 139564053 139612738 + Tifa protein_coding processed_transcript MGP_CBAJ_T0063294.1 MGP_CBAJ_G0027541.1 mouse_genomes_project 3 139564055 139572092 + MGP_CBAJ_P0063294 Tifa protein_coding protein_coding MGP_CBAJ_T0063295.1 MGP_CBAJ_G0027541.1 mouse_genomes_project 3 139564799 139572092 + MGP_CBAJ_P0063295 Tifa protein_coding protein_coding MGP_CBAJ_T0063296.1 MGP_CBAJ_G0027541.1 mouse_genomes_project 3 139564948 139572523 + MGP_CBAJ_P0063296 Tifa protein_coding protein_coding MGP_CBAJ_T0101872.1 MGP_CBAJ_G0039903.1 mouse_genomes_project 3 117362477 117368165 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0007646.1 MGP_CBAJ_G0006248.1 mouse_genomes_project 3 157360705 157362615 + Gm42706 lincRNA lincRNA MGP_CBAJ_T0007542.1 MGP_CBAJ_G0006164.1 mouse_genomes_project 3 110992937 111175378 + A230001M10Rik lincRNA lincRNA MGP_CBAJ_T0007543.1 MGP_CBAJ_G0006164.1 mouse_genomes_project 3 110993054 111020867 + A230001M10Rik lincRNA lincRNA MGP_CBAJ_T0007544.1 MGP_CBAJ_G0006164.1 mouse_genomes_project 3 110993370 111020072 + A230001M10Rik lincRNA lincRNA MGP_CBAJ_T0013789.1 MGP_CBAJ_G0011901.1 mouse_genomes_project 3 32156998 32157770 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007365.1 MGP_CBAJ_G0006031.1 mouse_genomes_project 3 16248249 16258170 + Mir124-2hg lincRNA lincRNA MGP_CBAJ_T0007366.1 MGP_CBAJ_G0006031.1 mouse_genomes_project 3 16248285 16257819 + Mir124-2hg lincRNA lincRNA MGP_CBAJ_T0007367.1 MGP_CBAJ_G0006031.1 mouse_genomes_project 3 16252228 16253714 + Mir124-2hg lincRNA lincRNA MGP_CBAJ_T0007368.1 MGP_CBAJ_G0006031.1 mouse_genomes_project 3 16252236 16257875 + Mir124-2hg lincRNA lincRNA MGP_CBAJ_T0007369.1 MGP_CBAJ_G0006031.1 mouse_genomes_project 3 16252253 16257788 + Mir124-2hg lincRNA lincRNA MGP_CBAJ_T0007370.1 MGP_CBAJ_G0006031.1 mouse_genomes_project 3 16253204 16268432 + Mir124-2hg lincRNA lincRNA MGP_CBAJ_T0007371.1 MGP_CBAJ_G0006031.1 mouse_genomes_project 3 16254052 16257875 + Mir124-2hg lincRNA lincRNA MGP_CBAJ_T0013788.1 MGP_CBAJ_G0011900.1 mouse_genomes_project 3 30749520 30749983 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101111.1 MGP_CBAJ_G0039309.1 mouse_genomes_project 3 135603497 135603927 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0013990.1 MGP_CBAJ_G0012102.1 mouse_genomes_project 3 100751983 100752438 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0062595.1 MGP_CBAJ_G0027394.1 mouse_genomes_project 3 114544017 114787658 + MGP_CBAJ_P0062595 Kcnd3 protein_coding protein_coding MGP_CBAJ_T0062596.1 MGP_CBAJ_G0027394.1 mouse_genomes_project 3 114544274 114781244 + Kcnd3 protein_coding retained_intron MGP_CBAJ_T0062597.1 MGP_CBAJ_G0027394.1 mouse_genomes_project 3 114544787 114783116 + MGP_CBAJ_P0062597 Kcnd3 protein_coding protein_coding MGP_CBAJ_T0062598.1 MGP_CBAJ_G0027394.1 mouse_genomes_project 3 114550460 114782965 + MGP_CBAJ_P0062598 Kcnd3 protein_coding protein_coding MGP_CBAJ_T0062599.1 MGP_CBAJ_G0027394.1 mouse_genomes_project 3 114782660 114783500 + Kcnd3 protein_coding processed_transcript MGP_CBAJ_T0061811.1 MGP_CBAJ_G0027230.1 mouse_genomes_project 3 102053294 102059289 + MGP_CBAJ_P0061811 Lingo4 protein_coding protein_coding MGP_CBAJ_T0007603.1 MGP_CBAJ_G0006210.1 mouse_genomes_project 3 142997485 143000237 + Gm43351 lincRNA lincRNA MGP_CBAJ_T0060693.1 MGP_CBAJ_G0026964.1 mouse_genomes_project 3 69155253 69182404 + MGP_CBAJ_P0060693 Tiparp protein_coding protein_coding MGP_CBAJ_T0060694.1 MGP_CBAJ_G0026964.1 mouse_genomes_project 3 69155303 69174482 + MGP_CBAJ_P0060694 Tiparp protein_coding protein_coding MGP_CBAJ_T0060695.1 MGP_CBAJ_G0026964.1 mouse_genomes_project 3 69172924 69179518 + Tiparp protein_coding processed_transcript MGP_CBAJ_T0063705.1 MGP_CBAJ_G0027624.1 mouse_genomes_project 3 156356521 156446594 - MGP_CBAJ_P0063705 Pkn2 protein_coding protein_coding MGP_CBAJ_T0063706.1 MGP_CBAJ_G0027624.1 mouse_genomes_project 3 156359328 156446505 - MGP_CBAJ_P0063706 Pkn2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063707.1 MGP_CBAJ_G0027624.1 mouse_genomes_project 3 156359430 156446252 - MGP_CBAJ_P0063707 Pkn2 protein_coding protein_coding MGP_CBAJ_T0063708.1 MGP_CBAJ_G0027624.1 mouse_genomes_project 3 156359430 156446252 - MGP_CBAJ_P0063708 Pkn2 protein_coding protein_coding MGP_CBAJ_T0063709.1 MGP_CBAJ_G0027624.1 mouse_genomes_project 3 156365552 156446510 - Pkn2 protein_coding processed_transcript MGP_CBAJ_T0063710.1 MGP_CBAJ_G0027624.1 mouse_genomes_project 3 156365634 156368698 - Pkn2 protein_coding retained_intron MGP_CBAJ_T0063711.1 MGP_CBAJ_G0027624.1 mouse_genomes_project 3 156370702 156446580 - Pkn2 protein_coding processed_transcript MGP_CBAJ_T0063712.1 MGP_CBAJ_G0027624.1 mouse_genomes_project 3 156375465 156388208 - MGP_CBAJ_P0063712 Pkn2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063713.1 MGP_CBAJ_G0027624.1 mouse_genomes_project 3 156376572 156378400 - Pkn2 protein_coding retained_intron MGP_CBAJ_T0063714.1 MGP_CBAJ_G0027624.1 mouse_genomes_project 3 156377367 156395761 - MGP_CBAJ_P0063714 Pkn2 protein_coding protein_coding MGP_CBAJ_T0063715.1 MGP_CBAJ_G0027624.1 mouse_genomes_project 3 156387918 156395724 - Pkn2 protein_coding retained_intron MGP_CBAJ_T0063716.1 MGP_CBAJ_G0027624.1 mouse_genomes_project 3 156396702 156446573 - Pkn2 protein_coding retained_intron MGP_CBAJ_T0063717.1 MGP_CBAJ_G0027624.1 mouse_genomes_project 3 156417464 156420259 - Pkn2 protein_coding retained_intron MGP_CBAJ_T0061260.1 MGP_CBAJ_G0027090.1 mouse_genomes_project 3 95189179 95190455 - Lamtor2 protein_coding retained_intron MGP_CBAJ_T0061261.1 MGP_CBAJ_G0027090.1 mouse_genomes_project 3 95189179 95192396 - MGP_CBAJ_P0061261 Lamtor2 protein_coding protein_coding MGP_CBAJ_T0061262.1 MGP_CBAJ_G0027090.1 mouse_genomes_project 3 95189180 95192231 - MGP_CBAJ_P0061262 Lamtor2 protein_coding protein_coding MGP_CBAJ_T0061263.1 MGP_CBAJ_G0027090.1 mouse_genomes_project 3 95189181 95192265 - Lamtor2 protein_coding processed_transcript MGP_CBAJ_T0061264.1 MGP_CBAJ_G0027090.1 mouse_genomes_project 3 95191601 95192446 - Lamtor2 protein_coding retained_intron MGP_CBAJ_T0013984.1 MGP_CBAJ_G0012096.1 mouse_genomes_project 3 99988411 99989039 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101864.1 MGP_CBAJ_G0039895.1 mouse_genomes_project 3 101681452 101681784 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0007607.1 MGP_CBAJ_G0006214.1 mouse_genomes_project 3 145123503 145164680 - Gm29811 lincRNA lincRNA MGP_CBAJ_T0063150.1 MGP_CBAJ_G0027517.1 mouse_genomes_project 3 133928525 134067747 + MGP_CBAJ_P0063150 Pde5a protein_coding protein_coding MGP_CBAJ_T0063151.1 MGP_CBAJ_G0027517.1 mouse_genomes_project 3 133929148 134067745 + MGP_CBAJ_P0063151 Pde5a protein_coding protein_coding MGP_CBAJ_T0063152.1 MGP_CBAJ_G0027517.1 mouse_genomes_project 3 133929800 133978277 + Pde5a protein_coding retained_intron MGP_CBAJ_T0004327.1 MGP_CBAJ_G0003772.1 mouse_genomes_project 3 172879225 172885801 - Gm43159 antisense antisense MGP_CBAJ_T0004247.1 MGP_CBAJ_G0003720.1 mouse_genomes_project 3 116248339 116426413 - Gm27008 antisense antisense MGP_CBAJ_T0004248.1 MGP_CBAJ_G0003720.1 mouse_genomes_project 3 116265034 116430577 - Gm27008 antisense antisense MGP_CBAJ_T0001139.1 MGP_CBAJ_G0001068.1 mouse_genomes_project 3 52448269 52452269 - TEC TEC MGP_CBAJ_T0014133.1 MGP_CBAJ_G0012245.1 mouse_genomes_project 3 147519439 147519956 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101098.1 MGP_CBAJ_G0039304.1 mouse_genomes_project 3 69128558 69155028 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101099.1 MGP_CBAJ_G0039304.1 mouse_genomes_project 3 69129998 69130472 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101100.1 MGP_CBAJ_G0039304.1 mouse_genomes_project 3 69139761 69156215 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101101.1 MGP_CBAJ_G0039304.1 mouse_genomes_project 3 69154332 69156057 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101102.1 MGP_CBAJ_G0039304.1 mouse_genomes_project 3 69154366 69156223 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0060649.1 MGP_CBAJ_G0026952.1 mouse_genomes_project 3 65850505 65932851 - MGP_CBAJ_P0060649 Gpr149 protein_coding protein_coding MGP_CBAJ_T0060650.1 MGP_CBAJ_G0026952.1 mouse_genomes_project 3 65919851 65930430 - Gpr149 protein_coding retained_intron MGP_CBAJ_T0060066.1 MGP_CBAJ_G0026839.1 mouse_genomes_project 3 33890597 33922027 - MGP_CBAJ_P0060066 Ccdc39 protein_coding protein_coding MGP_CBAJ_T0060067.1 MGP_CBAJ_G0026839.1 mouse_genomes_project 3 33891286 33892784 - Ccdc39 protein_coding retained_intron MGP_CBAJ_T0060068.1 MGP_CBAJ_G0026839.1 mouse_genomes_project 3 33896893 33922027 - Ccdc39 protein_coding retained_intron MGP_CBAJ_T0060069.1 MGP_CBAJ_G0026839.1 mouse_genomes_project 3 33898441 33921791 - Ccdc39 protein_coding retained_intron MGP_CBAJ_T0060070.1 MGP_CBAJ_G0026839.1 mouse_genomes_project 3 33902327 33904281 - Ccdc39 protein_coding retained_intron MGP_CBAJ_T0060071.1 MGP_CBAJ_G0026839.1 mouse_genomes_project 3 33915716 33922036 - Ccdc39 protein_coding retained_intron MGP_CBAJ_T0004213.1 MGP_CBAJ_G0003699.1 mouse_genomes_project 3 103097237 103106447 + Gm16740 antisense antisense MGP_CBAJ_T0014102.1 MGP_CBAJ_G0012214.1 mouse_genomes_project 3 134777138 134777884 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061780.1 MGP_CBAJ_G0027215.1 mouse_genomes_project 3 100388162 100389645 - MGP_CBAJ_P0061780 Crct1 protein_coding protein_coding MGP_CBAJ_T0061781.1 MGP_CBAJ_G0027215.1 mouse_genomes_project 3 100388476 100389627 - MGP_CBAJ_P0061781 Crct1 protein_coding protein_coding MGP_CBAJ_T0007381.1 MGP_CBAJ_G0006040.1 mouse_genomes_project 3 21243139 21255857 - Gm38324 lincRNA lincRNA MGP_CBAJ_T0061728.1 MGP_CBAJ_G0027170.1 mouse_genomes_project 3 97637288 97640366 - MGP_CBAJ_P0061728 S100a9 protein_coding protein_coding MGP_CBAJ_T0061729.1 MGP_CBAJ_G0027170.1 mouse_genomes_project 3 97637288 97640376 - MGP_CBAJ_P0061729 S100a9 protein_coding protein_coding MGP_CBAJ_T0062137.1 MGP_CBAJ_G0027284.1 mouse_genomes_project 3 104028511 104095623 - MGP_CBAJ_P0062137 Vps45 protein_coding protein_coding MGP_CBAJ_T0062138.1 MGP_CBAJ_G0027284.1 mouse_genomes_project 3 104082263 104094987 - Vps45 protein_coding retained_intron MGP_CBAJ_T0062139.1 MGP_CBAJ_G0027284.1 mouse_genomes_project 3 104094043 104094876 - Vps45 protein_coding processed_transcript MGP_CBAJ_T0061767.1 MGP_CBAJ_G0027203.1 mouse_genomes_project 3 100079032 100081085 - MGP_CBAJ_P0061767 Lce1g protein_coding protein_coding MGP_CBAJ_T0063201.1 MGP_CBAJ_G0027529.1 mouse_genomes_project 3 135722899 135753677 - MGP_CBAJ_P0063201 1700006A11Rik protein_coding protein_coding MGP_CBAJ_T0063202.1 MGP_CBAJ_G0027529.1 mouse_genomes_project 3 135723134 135753628 - MGP_CBAJ_P0063202 1700006A11Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0061148.1 MGP_CBAJ_G0027068.1 mouse_genomes_project 3 94439907 94442221 + Nes protein_coding retained_intron MGP_CBAJ_T0061149.1 MGP_CBAJ_G0027068.1 mouse_genomes_project 3 94439922 94449286 + MGP_CBAJ_P0061149 Nes protein_coding protein_coding MGP_CBAJ_T0061150.1 MGP_CBAJ_G0027068.1 mouse_genomes_project 3 94439958 94449286 + MGP_CBAJ_P0061150 Nes protein_coding protein_coding MGP_CBAJ_T0060415.1 MGP_CBAJ_G0026900.1 mouse_genomes_project 3 55848685 56018661 - MGP_CBAJ_P0060415 Frem2 protein_coding protein_coding MGP_CBAJ_T0060416.1 MGP_CBAJ_G0026900.1 mouse_genomes_project 3 55850470 55884899 - Frem2 protein_coding processed_transcript MGP_CBAJ_T0060417.1 MGP_CBAJ_G0026900.1 mouse_genomes_project 3 55850574 55859904 - Frem2 protein_coding retained_intron MGP_CBAJ_T0060418.1 MGP_CBAJ_G0026900.1 mouse_genomes_project 3 56009051 56013536 - Frem2 protein_coding retained_intron MGP_CBAJ_T0060569.1 MGP_CBAJ_G0026931.1 mouse_genomes_project 3 61630142 61647894 - MGP_CBAJ_P0060569 Siah2 protein_coding protein_coding MGP_CBAJ_T0060570.1 MGP_CBAJ_G0026931.1 mouse_genomes_project 3 61631380 61641595 - Siah2 protein_coding processed_transcript MGP_CBAJ_T0060188.1 MGP_CBAJ_G0026860.1 mouse_genomes_project 3 37787965 37793497 - MGP_CBAJ_P0060188 Cetn4 protein_coding protein_coding MGP_CBAJ_T0060189.1 MGP_CBAJ_G0026860.1 mouse_genomes_project 3 37788829 37793497 - MGP_CBAJ_P0060189 Cetn4 protein_coding protein_coding MGP_CBAJ_T0060190.1 MGP_CBAJ_G0026860.1 mouse_genomes_project 3 37788831 37793497 - MGP_CBAJ_P0060190 Cetn4 protein_coding protein_coding MGP_CBAJ_T0060191.1 MGP_CBAJ_G0026860.1 mouse_genomes_project 3 37788966 37793471 - MGP_CBAJ_P0060191 Cetn4 protein_coding protein_coding MGP_CBAJ_T0060192.1 MGP_CBAJ_G0026860.1 mouse_genomes_project 3 37790525 37793759 - MGP_CBAJ_P0060192 Cetn4 protein_coding protein_coding MGP_CBAJ_T0001105.1 MGP_CBAJ_G0001034.1 mouse_genomes_project 3 34168007 34173339 + TEC TEC MGP_CBAJ_T0001219.1 MGP_CBAJ_G0001146.1 mouse_genomes_project 3 94510124 94512392 + TEC TEC MGP_CBAJ_T0062032.1 MGP_CBAJ_G0027267.1 mouse_genomes_project 3 103476727 103506670 + MGP_CBAJ_P0062032 Ctss protein_coding protein_coding MGP_CBAJ_T0062033.1 MGP_CBAJ_G0027267.1 mouse_genomes_project 3 103476835 103506676 + MGP_CBAJ_P0062033 Ctss protein_coding protein_coding MGP_CBAJ_T0061949.1 MGP_CBAJ_G0027254.1 mouse_genomes_project 3 103030549 103034635 + Sema6c protein_coding processed_transcript MGP_CBAJ_T0061950.1 MGP_CBAJ_G0027254.1 mouse_genomes_project 3 103030586 103034520 + Sema6c protein_coding processed_transcript MGP_CBAJ_T0061951.1 MGP_CBAJ_G0027254.1 mouse_genomes_project 3 103030586 103043741 + MGP_CBAJ_P0061951 Sema6c protein_coding nonsense_mediated_decay MGP_CBAJ_T0061952.1 MGP_CBAJ_G0027254.1 mouse_genomes_project 3 103030586 103038430 + MGP_CBAJ_P0061952 Sema6c protein_coding nonsense_mediated_decay MGP_CBAJ_T0061953.1 MGP_CBAJ_G0027254.1 mouse_genomes_project 3 103030593 103034574 + MGP_CBAJ_P0061953 Sema6c protein_coding protein_coding MGP_CBAJ_T0061954.1 MGP_CBAJ_G0027254.1 mouse_genomes_project 3 103030597 103044112 + Sema6c protein_coding retained_intron MGP_CBAJ_T0061955.1 MGP_CBAJ_G0027254.1 mouse_genomes_project 3 103030597 103044112 + MGP_CBAJ_P0061955 Sema6c protein_coding nonsense_mediated_decay MGP_CBAJ_T0061956.1 MGP_CBAJ_G0027254.1 mouse_genomes_project 3 103030597 103044112 + MGP_CBAJ_P0061956 Sema6c protein_coding protein_coding MGP_CBAJ_T0061957.1 MGP_CBAJ_G0027254.1 mouse_genomes_project 3 103030728 103043376 + MGP_CBAJ_P0061957 Sema6c protein_coding unknown_likely_coding MGP_CBAJ_T0061958.1 MGP_CBAJ_G0027254.1 mouse_genomes_project 3 103034398 103043950 + MGP_CBAJ_P0061958 Sema6c protein_coding protein_coding MGP_CBAJ_T0061959.1 MGP_CBAJ_G0027254.1 mouse_genomes_project 3 103034398 103044112 + MGP_CBAJ_P0061959 Sema6c protein_coding protein_coding MGP_CBAJ_T0061960.1 MGP_CBAJ_G0027254.1 mouse_genomes_project 3 103038295 103040228 + Sema6c protein_coding processed_transcript MGP_CBAJ_T0061961.1 MGP_CBAJ_G0027254.1 mouse_genomes_project 3 103040410 103041983 + Sema6c protein_coding retained_intron MGP_CBAJ_T0061962.1 MGP_CBAJ_G0027254.1 mouse_genomes_project 3 103040892 103042064 + Sema6c protein_coding retained_intron MGP_CBAJ_T0007523.1 MGP_CBAJ_G0006146.1 mouse_genomes_project 3 103309377 103325546 - lincRNA lincRNA MGP_CBAJ_T0013800.1 MGP_CBAJ_G0011912.1 mouse_genomes_project 3 36805843 36806341 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060430.1 MGP_CBAJ_G0026903.1 mouse_genomes_project 3 56813607 56843517 + MGP_CBAJ_P0060430 Postn protein_coding protein_coding MGP_CBAJ_T0060431.1 MGP_CBAJ_G0026903.1 mouse_genomes_project 3 56813607 56843520 + MGP_CBAJ_P0060431 Postn protein_coding protein_coding MGP_CBAJ_T0060432.1 MGP_CBAJ_G0026903.1 mouse_genomes_project 3 56813623 56843517 + MGP_CBAJ_P0060432 Postn protein_coding protein_coding MGP_CBAJ_T0060433.1 MGP_CBAJ_G0026903.1 mouse_genomes_project 3 56813641 56842935 + MGP_CBAJ_P0060433 Postn protein_coding protein_coding MGP_CBAJ_T0060434.1 MGP_CBAJ_G0026903.1 mouse_genomes_project 3 56830047 56843130 + MGP_CBAJ_P0060434 Postn protein_coding protein_coding MGP_CBAJ_T0060435.1 MGP_CBAJ_G0026903.1 mouse_genomes_project 3 56830967 56837195 + Postn protein_coding retained_intron MGP_CBAJ_T0060436.1 MGP_CBAJ_G0026903.1 mouse_genomes_project 3 56835589 56842970 + Postn protein_coding retained_intron MGP_CBAJ_T0060437.1 MGP_CBAJ_G0026903.1 mouse_genomes_project 3 56835591 56843065 + Postn protein_coding retained_intron MGP_CBAJ_T0060438.1 MGP_CBAJ_G0026903.1 mouse_genomes_project 3 56841371 56842876 + Postn protein_coding retained_intron MGP_CBAJ_T0099155.1 MGP_CBAJ_G0037410.1 mouse_genomes_project 3 36045826 36045931 + Gm25696 snRNA snRNA MGP_CBAJ_T0101861.1 MGP_CBAJ_G0039892.1 mouse_genomes_project 3 97782277 97784160 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0007396.1 MGP_CBAJ_G0006054.1 mouse_genomes_project 3 34614238 34615018 - Gm29135 lincRNA lincRNA MGP_CBAJ_T0001166.1 MGP_CBAJ_G0001093.1 mouse_genomes_project 3 54163642 54166927 - TEC TEC MGP_CBAJ_T0013974.1 MGP_CBAJ_G0012086.1 mouse_genomes_project 3 96677615 96678141 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063505.1 MGP_CBAJ_G0027583.1 mouse_genomes_project 3 147995321 148025925 + MGP_CBAJ_P0063505 Ube2d3 protein_coding protein_coding MGP_CBAJ_T0063506.1 MGP_CBAJ_G0027583.1 mouse_genomes_project 3 147995488 148025974 + MGP_CBAJ_P0063506 Ube2d3 protein_coding protein_coding MGP_CBAJ_T0063507.1 MGP_CBAJ_G0027583.1 mouse_genomes_project 3 147995701 147998766 + Ube2d3 protein_coding processed_transcript MGP_CBAJ_T0063508.1 MGP_CBAJ_G0027583.1 mouse_genomes_project 3 147995705 148017150 + MGP_CBAJ_P0063508 Ube2d3 protein_coding protein_coding MGP_CBAJ_T0063509.1 MGP_CBAJ_G0027583.1 mouse_genomes_project 3 147995715 148023729 + MGP_CBAJ_P0063509 Ube2d3 protein_coding protein_coding MGP_CBAJ_T0063510.1 MGP_CBAJ_G0027583.1 mouse_genomes_project 3 147995737 148028531 + MGP_CBAJ_P0063510 Ube2d3 protein_coding protein_coding MGP_CBAJ_T0063511.1 MGP_CBAJ_G0027583.1 mouse_genomes_project 3 147995919 148012404 + MGP_CBAJ_P0063511 Ube2d3 protein_coding protein_coding MGP_CBAJ_T0063512.1 MGP_CBAJ_G0027583.1 mouse_genomes_project 3 147995926 148025985 + MGP_CBAJ_P0063512 Ube2d3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063513.1 MGP_CBAJ_G0027583.1 mouse_genomes_project 3 147996036 148015318 + Ube2d3 protein_coding retained_intron MGP_CBAJ_T0063514.1 MGP_CBAJ_G0027583.1 mouse_genomes_project 3 148011780 148017194 + Ube2d3 protein_coding retained_intron MGP_CBAJ_T0063515.1 MGP_CBAJ_G0027583.1 mouse_genomes_project 3 148015802 148021374 + Ube2d3 protein_coding retained_intron MGP_CBAJ_T0004290.1 MGP_CBAJ_G0003745.1 mouse_genomes_project 3 141769565 141774394 + Gm42650 antisense antisense MGP_CBAJ_T0013784.1 MGP_CBAJ_G0011896.1 mouse_genomes_project 3 29437867 29438006 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0060939.1 MGP_CBAJ_G0027019.1 mouse_genomes_project 3 88141139 88165875 + MGP_CBAJ_P0060939 Map9 protein_coding protein_coding MGP_CBAJ_T0060940.1 MGP_CBAJ_G0027019.1 mouse_genomes_project 3 88141167 88161279 + MGP_CBAJ_P0060940 Map9 protein_coding protein_coding MGP_CBAJ_T0060941.1 MGP_CBAJ_G0027019.1 mouse_genomes_project 3 88141167 88179280 + MGP_CBAJ_P0060941 Map9 protein_coding protein_coding MGP_CBAJ_T0060942.1 MGP_CBAJ_G0027019.1 mouse_genomes_project 3 88141265 88165811 + MGP_CBAJ_P0060942 Map9 protein_coding protein_coding MGP_CBAJ_T0060943.1 MGP_CBAJ_G0027019.1 mouse_genomes_project 3 88141282 88179280 + MGP_CBAJ_P0060943 Map9 protein_coding protein_coding MGP_CBAJ_T0060944.1 MGP_CBAJ_G0027019.1 mouse_genomes_project 3 88162029 88164219 + Map9 protein_coding retained_intron MGP_CBAJ_T0060945.1 MGP_CBAJ_G0027019.1 mouse_genomes_project 3 88162390 88165593 + MGP_CBAJ_P0060945 Map9 protein_coding protein_coding MGP_CBAJ_T0061796.1 MGP_CBAJ_G0027224.1 mouse_genomes_project 3 100994582 101000392 + MGP_CBAJ_P0061796 S100a11 protein_coding protein_coding MGP_CBAJ_T0062772.1 MGP_CBAJ_G0027442.1 mouse_genomes_project 3 117586008 117594652 + MGP_CBAJ_P0062772 Gnat2 protein_coding protein_coding MGP_CBAJ_T0062773.1 MGP_CBAJ_G0027442.1 mouse_genomes_project 3 117586099 117589604 + MGP_CBAJ_P0062773 Gnat2 protein_coding protein_coding MGP_CBAJ_T0062774.1 MGP_CBAJ_G0027442.1 mouse_genomes_project 3 117586357 117591637 + MGP_CBAJ_P0062774 Gnat2 protein_coding protein_coding MGP_CBAJ_T0062775.1 MGP_CBAJ_G0027442.1 mouse_genomes_project 3 117586411 117594650 + Gnat2 protein_coding retained_intron MGP_CBAJ_T0062776.1 MGP_CBAJ_G0027442.1 mouse_genomes_project 3 117587667 117591652 + MGP_CBAJ_P0062776 Gnat2 protein_coding protein_coding MGP_CBAJ_T0062777.1 MGP_CBAJ_G0027442.1 mouse_genomes_project 3 117590462 117594511 + Gnat2 protein_coding processed_transcript MGP_CBAJ_T0001295.1 MGP_CBAJ_G0001222.1 mouse_genomes_project 3 138931943 138937904 - TEC TEC MGP_CBAJ_T0062638.1 MGP_CBAJ_G0027406.1 mouse_genomes_project 3 115284291 115308234 + MGP_CBAJ_P0062638 Chia1 protein_coding protein_coding MGP_CBAJ_T0062639.1 MGP_CBAJ_G0027406.1 mouse_genomes_project 3 115284452 115305039 + MGP_CBAJ_P0062639 Chia1 protein_coding protein_coding MGP_CBAJ_T0062640.1 MGP_CBAJ_G0027406.1 mouse_genomes_project 3 115298561 115304655 + Chia1 protein_coding retained_intron MGP_CBAJ_T0004271.1 MGP_CBAJ_G0003731.1 mouse_genomes_project 3 127081573 127082112 + Gm42457 antisense antisense MGP_CBAJ_T0010436.1 MGP_CBAJ_G0008574.1 mouse_genomes_project 3 153157745 153157867 + Mir7j miRNA miRNA MGP_CBAJ_T0013889.1 MGP_CBAJ_G0012001.1 mouse_genomes_project 3 65407540 65411825 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061853.1 MGP_CBAJ_G0027237.1 mouse_genomes_project 3 102293477 102373232 - MGP_CBAJ_P0061853 Tuft1 protein_coding protein_coding MGP_CBAJ_T0061854.1 MGP_CBAJ_G0027237.1 mouse_genomes_project 3 102293714 102373160 - MGP_CBAJ_P0061854 Tuft1 protein_coding protein_coding MGP_CBAJ_T0061855.1 MGP_CBAJ_G0027237.1 mouse_genomes_project 3 102294886 102296019 - Tuft1 protein_coding retained_intron MGP_CBAJ_T0061856.1 MGP_CBAJ_G0027237.1 mouse_genomes_project 3 102303000 102373160 - MGP_CBAJ_P0061856 Tuft1 protein_coding protein_coding MGP_CBAJ_T0013755.1 MGP_CBAJ_G0011867.1 mouse_genomes_project 3 16121661 16122001 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011425.1 MGP_CBAJ_G0009563.1 mouse_genomes_project 3 168549210 168549478 + Gm22136 misc_RNA misc_RNA MGP_CBAJ_T0059740.1 MGP_CBAJ_G0026777.1 mouse_genomes_project 3 16432611 16433161 + MGP_CBAJ_P0059740 Cypt12 protein_coding protein_coding MGP_CBAJ_T0059993.1 MGP_CBAJ_G0026829.1 mouse_genomes_project 3 32412828 32438876 - MGP_CBAJ_P0059993 Kcnmb3 protein_coding protein_coding MGP_CBAJ_T0099174.1 MGP_CBAJ_G0037429.1 mouse_genomes_project 3 69424851 69424958 - Gm25755 snRNA snRNA MGP_CBAJ_T0013882.1 MGP_CBAJ_G0011994.1 mouse_genomes_project 3 62832772 62833173 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0063411.1 MGP_CBAJ_G0027564.1 mouse_genomes_project 3 143509770 143537734 - MGP_CBAJ_P0063411 Sgms2 protein_coding protein_coding MGP_CBAJ_T0063412.1 MGP_CBAJ_G0027564.1 mouse_genomes_project 3 143534910 143537741 - MGP_CBAJ_P0063412 Sgms2 protein_coding protein_coding MGP_CBAJ_T0063413.1 MGP_CBAJ_G0027564.1 mouse_genomes_project 3 143534969 143602724 - MGP_CBAJ_P0063413 Sgms2 protein_coding protein_coding MGP_CBAJ_T0063414.1 MGP_CBAJ_G0027564.1 mouse_genomes_project 3 143535034 143603656 - Sgms2 protein_coding processed_transcript MGP_CBAJ_T0062167.1 MGP_CBAJ_G0027294.1 mouse_genomes_project 3 104328287 104328668 + MGP_CBAJ_P0062167 Hist2h2bb protein_coding protein_coding MGP_CBAJ_T0007561.1 MGP_CBAJ_G0006178.1 mouse_genomes_project 3 117734050 117751164 + Gm42754 lincRNA lincRNA MGP_CBAJ_T0099172.1 MGP_CBAJ_G0037427.1 mouse_genomes_project 3 67210300 67210398 + Gm23500 snRNA snRNA MGP_CBAJ_T0060537.1 MGP_CBAJ_G0026924.1 mouse_genomes_project 3 60570890 60686931 + MGP_CBAJ_P0060537 Rnf13 protein_coding protein_coding MGP_CBAJ_T0060538.1 MGP_CBAJ_G0026924.1 mouse_genomes_project 3 60570891 60621197 + MGP_CBAJ_P0060538 Rnf13 protein_coding protein_coding MGP_CBAJ_T0060539.1 MGP_CBAJ_G0026924.1 mouse_genomes_project 3 60570903 60662484 + Rnf13 protein_coding processed_transcript MGP_CBAJ_T0060540.1 MGP_CBAJ_G0026924.1 mouse_genomes_project 3 60570910 60685588 + Rnf13 protein_coding processed_transcript MGP_CBAJ_T0060541.1 MGP_CBAJ_G0026924.1 mouse_genomes_project 3 60570910 60686933 + MGP_CBAJ_P0060541 Rnf13 protein_coding protein_coding MGP_CBAJ_T0060542.1 MGP_CBAJ_G0026924.1 mouse_genomes_project 3 60570913 60677996 + MGP_CBAJ_P0060542 Rnf13 protein_coding protein_coding MGP_CBAJ_T0060543.1 MGP_CBAJ_G0026924.1 mouse_genomes_project 3 60570941 60686819 + MGP_CBAJ_P0060543 Rnf13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060544.1 MGP_CBAJ_G0026924.1 mouse_genomes_project 3 60570948 60684932 + MGP_CBAJ_P0060544 Rnf13 protein_coding protein_coding MGP_CBAJ_T0060545.1 MGP_CBAJ_G0026924.1 mouse_genomes_project 3 60570948 60608301 + MGP_CBAJ_P0060545 Rnf13 protein_coding protein_coding MGP_CBAJ_T0060546.1 MGP_CBAJ_G0026924.1 mouse_genomes_project 3 60570948 60652966 + MGP_CBAJ_P0060546 Rnf13 protein_coding protein_coding MGP_CBAJ_T0060547.1 MGP_CBAJ_G0026924.1 mouse_genomes_project 3 60651259 60655132 + Rnf13 protein_coding retained_intron MGP_CBAJ_T0004325.1 MGP_CBAJ_G0003770.1 mouse_genomes_project 3 169798123 169800809 - Gm20389 antisense antisense MGP_CBAJ_T0060593.1 MGP_CBAJ_G0026937.1 mouse_genomes_project 3 62218933 62221924 - MGP_CBAJ_P0060593 P2ry13 protein_coding protein_coding MGP_CBAJ_T0014165.1 MGP_CBAJ_G0012277.1 mouse_genomes_project 3 156215729 156216791 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013817.1 MGP_CBAJ_G0011929.1 mouse_genomes_project 3 39779219 39779592 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014003.1 MGP_CBAJ_G0012115.1 mouse_genomes_project 3 103789071 103789966 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001109.1 MGP_CBAJ_G0001038.1 mouse_genomes_project 3 36165592 36166151 + TEC TEC MGP_CBAJ_T0099149.1 MGP_CBAJ_G0037404.1 mouse_genomes_project 3 15153937 15154001 - Gm26485 snRNA snRNA MGP_CBAJ_T0100499.1 MGP_CBAJ_G0038754.1 mouse_genomes_project 3 168658714 168658830 + Gm22206 snoRNA snoRNA MGP_CBAJ_T0004172.1 MGP_CBAJ_G0003669.1 mouse_genomes_project 3 65653264 65656273 - 9330121J05Rik antisense antisense MGP_CBAJ_T0063818.1 MGP_CBAJ_G0027647.1 mouse_genomes_project 3 160500066 160503207 + Ctbs protein_coding retained_intron MGP_CBAJ_T0063819.1 MGP_CBAJ_G0027647.1 mouse_genomes_project 3 160500741 160517719 + MGP_CBAJ_P0063819 Ctbs protein_coding protein_coding MGP_CBAJ_T0063820.1 MGP_CBAJ_G0027647.1 mouse_genomes_project 3 160500749 160507631 + MGP_CBAJ_P0063820 Ctbs protein_coding nonsense_mediated_decay MGP_CBAJ_T0063821.1 MGP_CBAJ_G0027647.1 mouse_genomes_project 3 160500764 160517641 + MGP_CBAJ_P0063821 Ctbs protein_coding protein_coding MGP_CBAJ_T0098318.1 MGP_CBAJ_G0036585.1 mouse_genomes_project 3 24890307 24899668 - sense_intronic sense_intronic MGP_CBAJ_T0100476.1 MGP_CBAJ_G0038731.1 mouse_genomes_project 3 108763793 108763870 + Gm25802 snoRNA snoRNA MGP_CBAJ_T0001124.1 MGP_CBAJ_G0001053.1 mouse_genomes_project 3 41604333 41605296 - TEC TEC MGP_CBAJ_T0001348.1 MGP_CBAJ_G0001274.1 mouse_genomes_project 3 169167667 169169900 + TEC TEC MGP_CBAJ_T0014080.1 MGP_CBAJ_G0012192.1 mouse_genomes_project 3 127318386 127318771 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100443.1 MGP_CBAJ_G0038698.1 mouse_genomes_project 3 47678220 47678352 + Gm26081 snoRNA snoRNA MGP_CBAJ_T0013797.1 MGP_CBAJ_G0011909.1 mouse_genomes_project 3 36188614 36189603 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013774.1 MGP_CBAJ_G0011886.1 mouse_genomes_project 3 21482817 21483587 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101107.1 MGP_CBAJ_G0039307.1 mouse_genomes_project 3 104741079 104769087 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101108.1 MGP_CBAJ_G0039307.1 mouse_genomes_project 3 104741082 104769086 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101109.1 MGP_CBAJ_G0039307.1 mouse_genomes_project 3 104742044 104746324 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0061480.1 MGP_CBAJ_G0027122.1 mouse_genomes_project 3 96126237 96143818 - MGP_CBAJ_P0061480 Dcst1 protein_coding protein_coding MGP_CBAJ_T0061481.1 MGP_CBAJ_G0027122.1 mouse_genomes_project 3 96127041 96131563 - Dcst1 protein_coding retained_intron MGP_CBAJ_T0061482.1 MGP_CBAJ_G0027122.1 mouse_genomes_project 3 96128737 96131533 - Dcst1 protein_coding processed_transcript MGP_CBAJ_T0061483.1 MGP_CBAJ_G0027122.1 mouse_genomes_project 3 96129645 96130915 - Dcst1 protein_coding retained_intron MGP_CBAJ_T0061484.1 MGP_CBAJ_G0027122.1 mouse_genomes_project 3 96133524 96142827 - Dcst1 protein_coding retained_intron MGP_CBAJ_T0061485.1 MGP_CBAJ_G0027122.1 mouse_genomes_project 3 96133609 96142828 - Dcst1 protein_coding retained_intron MGP_CBAJ_T0001317.1 MGP_CBAJ_G0001243.1 mouse_genomes_project 3 145091431 145094646 + TEC TEC MGP_CBAJ_T0063415.1 MGP_CBAJ_G0027565.1 mouse_genomes_project 3 143688784 143782126 + MGP_CBAJ_P0063415 Papss1 protein_coding protein_coding MGP_CBAJ_T0063416.1 MGP_CBAJ_G0027565.1 mouse_genomes_project 3 143688881 143782125 + MGP_CBAJ_P0063416 Papss1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063417.1 MGP_CBAJ_G0027565.1 mouse_genomes_project 3 143688912 143782125 + MGP_CBAJ_P0063417 Papss1 protein_coding protein_coding MGP_CBAJ_T0063418.1 MGP_CBAJ_G0027565.1 mouse_genomes_project 3 143688915 143782126 + MGP_CBAJ_P0063418 Papss1 protein_coding protein_coding MGP_CBAJ_T0063419.1 MGP_CBAJ_G0027565.1 mouse_genomes_project 3 143688951 143707740 + MGP_CBAJ_P0063419 Papss1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0004269.1 MGP_CBAJ_G0003729.1 mouse_genomes_project 3 126775127 126777913 + Gm29151 antisense antisense MGP_CBAJ_T0062244.1 MGP_CBAJ_G0027315.1 mouse_genomes_project 3 105104374 105117620 - MGP_CBAJ_P0062244 Gja8 protein_coding protein_coding MGP_CBAJ_T0001178.1 MGP_CBAJ_G0001105.1 mouse_genomes_project 3 58088584 58091977 + TEC TEC MGP_CBAJ_T0013847.1 MGP_CBAJ_G0011959.1 mouse_genomes_project 3 51759192 51759655 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014008.1 MGP_CBAJ_G0012120.1 mouse_genomes_project 3 104517985 104518437 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013765.1 MGP_CBAJ_G0011877.1 mouse_genomes_project 3 18593694 18594254 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014015.1 MGP_CBAJ_G0012127.1 mouse_genomes_project 3 107546215 107546799 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013879.1 MGP_CBAJ_G0011991.1 mouse_genomes_project 3 62494600 62498992 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001175.1 MGP_CBAJ_G0001102.1 mouse_genomes_project 3 55841088 55842279 + TEC TEC MGP_CBAJ_T0059937.1 MGP_CBAJ_G0026816.1 mouse_genomes_project 3 30382144 30412327 + MGP_CBAJ_P0059937 Lrriq4 protein_coding protein_coding MGP_CBAJ_T0059938.1 MGP_CBAJ_G0026816.1 mouse_genomes_project 3 30382960 30412195 + MGP_CBAJ_P0059938 Lrriq4 protein_coding protein_coding MGP_CBAJ_T0059939.1 MGP_CBAJ_G0026816.1 mouse_genomes_project 3 30385515 30412195 + MGP_CBAJ_P0059939 Lrriq4 protein_coding protein_coding MGP_CBAJ_T0011424.1 MGP_CBAJ_G0009562.1 mouse_genomes_project 3 137666688 137666956 - Gm26275 misc_RNA misc_RNA MGP_CBAJ_T0014123.1 MGP_CBAJ_G0012235.1 mouse_genomes_project 3 144922419 144922807 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001297.1 MGP_CBAJ_G0001224.1 mouse_genomes_project 3 139499165 139501526 - TEC TEC MGP_CBAJ_T0001360.1 MGP_CBAJ_G0001286.1 mouse_genomes_project 3 173455384 173457855 - TEC TEC MGP_CBAJ_T0098365.1 MGP_CBAJ_G0036631.1 mouse_genomes_project 3 113653088 113655943 + Gm43581 sense_intronic sense_intronic MGP_CBAJ_T0010430.1 MGP_CBAJ_G0008568.1 mouse_genomes_project 3 146577986 146578080 - Gm44361 miRNA miRNA MGP_CBAJ_T0100433.1 MGP_CBAJ_G0038688.1 mouse_genomes_project 3 15647080 15647219 - Gm24963 snoRNA snoRNA MGP_CBAJ_T0004163.1 MGP_CBAJ_G0003662.1 mouse_genomes_project 3 57605582 57640956 + 4931419H13Rik antisense antisense MGP_CBAJ_T0062424.1 MGP_CBAJ_G0027363.1 mouse_genomes_project 3 111791561 111804235 + MGP_CBAJ_P0062424 Sike1 protein_coding protein_coding MGP_CBAJ_T0062425.1 MGP_CBAJ_G0027363.1 mouse_genomes_project 3 111791583 111795061 + Sike1 protein_coding retained_intron MGP_CBAJ_T0062426.1 MGP_CBAJ_G0027363.1 mouse_genomes_project 3 111791648 111797970 + MGP_CBAJ_P0062426 Sike1 protein_coding protein_coding MGP_CBAJ_T0062427.1 MGP_CBAJ_G0027363.1 mouse_genomes_project 3 111791859 111793161 + Sike1 protein_coding retained_intron MGP_CBAJ_T0062428.1 MGP_CBAJ_G0027363.1 mouse_genomes_project 3 111791985 111797612 + MGP_CBAJ_P0062428 Sike1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062429.1 MGP_CBAJ_G0027363.1 mouse_genomes_project 3 111792537 111795048 + Sike1 protein_coding retained_intron MGP_CBAJ_T0010418.1 MGP_CBAJ_G0008556.1 mouse_genomes_project 3 126340625 126340679 + Mir669n miRNA miRNA MGP_CBAJ_T0017746.1 MGP_CBAJ_G0015265.1 mouse_genomes_project 3 133438274 133445090 - processed_transcript retained_intron MGP_CBAJ_T0013978.1 MGP_CBAJ_G0012090.1 mouse_genomes_project 3 97699809 97700641 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099205.1 MGP_CBAJ_G0037460.1 mouse_genomes_project 3 111744990 111745155 - Gm22826 snRNA snRNA MGP_CBAJ_T0013803.1 MGP_CBAJ_G0011915.1 mouse_genomes_project 3 37131572 37131824 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060806.1 MGP_CBAJ_G0026988.1 mouse_genomes_project 3 73611695 73636580 - MGP_CBAJ_P0060806 B3galnt1 protein_coding protein_coding MGP_CBAJ_T0101874.1 MGP_CBAJ_G0039905.1 mouse_genomes_project 3 117511722 117514527 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013829.1 MGP_CBAJ_G0011941.1 mouse_genomes_project 3 44884480 44885009 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062689.1 MGP_CBAJ_G0027420.1 mouse_genomes_project 3 116599390 116603499 + MGP_CBAJ_P0062689 A630076J17Rik protein_coding protein_coding MGP_CBAJ_T0010392.1 MGP_CBAJ_G0008530.1 mouse_genomes_project 3 72966139 72966203 + Mir15b miRNA miRNA MGP_CBAJ_T0013795.1 MGP_CBAJ_G0011907.1 mouse_genomes_project 3 35825351 35826270 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062086.1 MGP_CBAJ_G0027275.1 mouse_genomes_project 3 103742895 103802794 - MGP_CBAJ_P0062086 Rprd2 protein_coding protein_coding MGP_CBAJ_T0062087.1 MGP_CBAJ_G0027275.1 mouse_genomes_project 3 103742898 103802801 - MGP_CBAJ_P0062087 Rprd2 protein_coding protein_coding MGP_CBAJ_T0062088.1 MGP_CBAJ_G0027275.1 mouse_genomes_project 3 103755191 103761413 - Rprd2 protein_coding retained_intron MGP_CBAJ_T0062089.1 MGP_CBAJ_G0027275.1 mouse_genomes_project 3 103756889 103802821 - MGP_CBAJ_P0062089 Rprd2 protein_coding protein_coding MGP_CBAJ_T0062090.1 MGP_CBAJ_G0027275.1 mouse_genomes_project 3 103757704 103761391 - Rprd2 protein_coding processed_transcript MGP_CBAJ_T0062091.1 MGP_CBAJ_G0027275.1 mouse_genomes_project 3 103768417 103802906 - Rprd2 protein_coding retained_intron MGP_CBAJ_T0061777.1 MGP_CBAJ_G0027212.1 mouse_genomes_project 3 100275890 100277009 + MGP_CBAJ_P0061777 Lce3b protein_coding protein_coding MGP_CBAJ_T0099229.1 MGP_CBAJ_G0037484.1 mouse_genomes_project 3 163659654 163659760 - Gm26468 snRNA snRNA MGP_CBAJ_T0101846.1 MGP_CBAJ_G0039877.1 mouse_genomes_project 3 67538514 67545310 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013720.1 MGP_CBAJ_G0011832.1 mouse_genomes_project 3 5931616 5932846 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013894.1 MGP_CBAJ_G0012006.1 mouse_genomes_project 3 67353190 67353480 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063782.1 MGP_CBAJ_G0027637.1 mouse_genomes_project 3 159545921 159548928 - MGP_CBAJ_P0063782 Cyr61 protein_coding protein_coding MGP_CBAJ_T0059895.1 MGP_CBAJ_G0026809.1 mouse_genomes_project 3 28326022 28343368 + MGP_CBAJ_P0059895 Eif5a2 protein_coding protein_coding MGP_CBAJ_T0098361.1 MGP_CBAJ_G0036627.1 mouse_genomes_project 3 113145592 113148680 - Gm43256 sense_intronic sense_intronic MGP_CBAJ_T0013717.1 MGP_CBAJ_G0011829.1 mouse_genomes_project 3 5119423 5120008 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0060413.1 MGP_CBAJ_G0026899.1 mouse_genomes_project 3 55815918 55827529 + Stoml3 protein_coding retained_intron MGP_CBAJ_T0060414.1 MGP_CBAJ_G0026899.1 mouse_genomes_project 3 55815992 55840741 + MGP_CBAJ_P0060414 Stoml3 protein_coding protein_coding MGP_CBAJ_T0014167.1 MGP_CBAJ_G0012279.1 mouse_genomes_project 3 158268501 158269063 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017702.1 MGP_CBAJ_G0015248.1 mouse_genomes_project 3 54364530 54365915 + Gm38132 processed_transcript lincRNA MGP_CBAJ_T0017703.1 MGP_CBAJ_G0015248.1 mouse_genomes_project 3 54364559 54365572 + Gm38132 processed_transcript retained_intron MGP_CBAJ_T0013922.1 MGP_CBAJ_G0012034.1 mouse_genomes_project 3 74227120 74227400 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017725.1 MGP_CBAJ_G0015260.1 mouse_genomes_project 3 115760201 115764130 - 2010016I18Rik processed_transcript antisense MGP_CBAJ_T0017726.1 MGP_CBAJ_G0015260.1 mouse_genomes_project 3 115760219 115762043 - 2010016I18Rik processed_transcript antisense MGP_CBAJ_T0017727.1 MGP_CBAJ_G0015260.1 mouse_genomes_project 3 115760232 115761670 - 2010016I18Rik processed_transcript retained_intron MGP_CBAJ_T0017728.1 MGP_CBAJ_G0015260.1 mouse_genomes_project 3 115760232 115761657 - 2010016I18Rik processed_transcript processed_transcript MGP_CBAJ_T0017729.1 MGP_CBAJ_G0015260.1 mouse_genomes_project 3 115762278 115764065 - 2010016I18Rik processed_transcript retained_intron MGP_CBAJ_T0014018.1 MGP_CBAJ_G0012130.1 mouse_genomes_project 3 107974559 107975264 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063073.1 MGP_CBAJ_G0027504.1 mouse_genomes_project 3 132166689 132261259 - MGP_CBAJ_P0063073 Tmem56 protein_coding protein_coding MGP_CBAJ_T0063074.1 MGP_CBAJ_G0027504.1 mouse_genomes_project 3 132166936 132207177 - MGP_CBAJ_P0063074 Tmem56 protein_coding unknown_likely_coding MGP_CBAJ_T0063075.1 MGP_CBAJ_G0027504.1 mouse_genomes_project 3 132166936 132239109 - MGP_CBAJ_P0063075 Tmem56 protein_coding protein_coding MGP_CBAJ_T0063076.1 MGP_CBAJ_G0027504.1 mouse_genomes_project 3 132166936 132239083 - MGP_CBAJ_P0063076 Tmem56 protein_coding protein_coding MGP_CBAJ_T0063077.1 MGP_CBAJ_G0027504.1 mouse_genomes_project 3 132170966 132227775 - MGP_CBAJ_P0063077 Tmem56 protein_coding protein_coding MGP_CBAJ_T0063078.1 MGP_CBAJ_G0027504.1 mouse_genomes_project 3 132198451 132261259 - MGP_CBAJ_P0063078 Tmem56 protein_coding protein_coding MGP_CBAJ_T0063079.1 MGP_CBAJ_G0027504.1 mouse_genomes_project 3 132198495 132201651 - Tmem56 protein_coding retained_intron MGP_CBAJ_T0063080.1 MGP_CBAJ_G0027504.1 mouse_genomes_project 3 132205799 132261156 - Tmem56 protein_coding processed_transcript MGP_CBAJ_T0063081.1 MGP_CBAJ_G0027504.1 mouse_genomes_project 3 132205852 132261163 - Tmem56 protein_coding processed_transcript MGP_CBAJ_T0060487.1 MGP_CBAJ_G0026913.1 mouse_genomes_project 3 57694486 57732881 + MGP_CBAJ_P0060487 Ccdc169 protein_coding protein_coding MGP_CBAJ_T0060488.1 MGP_CBAJ_G0026913.1 mouse_genomes_project 3 57697220 57731503 + MGP_CBAJ_P0060488 Ccdc169 protein_coding protein_coding MGP_CBAJ_T0060489.1 MGP_CBAJ_G0026913.1 mouse_genomes_project 3 57697220 57730451 + MGP_CBAJ_P0060489 Ccdc169 protein_coding protein_coding MGP_CBAJ_T0060490.1 MGP_CBAJ_G0026913.1 mouse_genomes_project 3 57697237 57714267 + MGP_CBAJ_P0060490 Ccdc169 protein_coding protein_coding MGP_CBAJ_T0060491.1 MGP_CBAJ_G0026913.1 mouse_genomes_project 3 57699470 57731557 + MGP_CBAJ_P0060491 Ccdc169 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060492.1 MGP_CBAJ_G0026913.1 mouse_genomes_project 3 57699470 57731557 + MGP_CBAJ_P0060492 Ccdc169 protein_coding nonsense_mediated_decay MGP_CBAJ_T0013794.1 MGP_CBAJ_G0011906.1 mouse_genomes_project 3 34297360 34298255 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011413.1 MGP_CBAJ_G0009551.1 mouse_genomes_project 3 77819600 77819899 - Gm22538 misc_RNA misc_RNA MGP_CBAJ_T0001351.1 MGP_CBAJ_G0001277.1 mouse_genomes_project 3 170221651 170224442 + TEC TEC MGP_CBAJ_T0100446.1 MGP_CBAJ_G0038701.1 mouse_genomes_project 3 52851048 52851183 - Gm24503 snoRNA snoRNA MGP_CBAJ_T0007540.1 MGP_CBAJ_G0006162.1 mouse_genomes_project 3 110401156 110405429 + lincRNA lincRNA MGP_CBAJ_T0001192.1 MGP_CBAJ_G0001119.1 mouse_genomes_project 3 63748075 63752055 + TEC TEC MGP_CBAJ_T0099178.1 MGP_CBAJ_G0037433.1 mouse_genomes_project 3 77263327 77263478 - Gm22451 snRNA snRNA MGP_CBAJ_T0061306.1 MGP_CBAJ_G0027095.1 mouse_genomes_project 3 95337356 95364407 + MGP_CBAJ_P0061306 2810403A07Rik protein_coding protein_coding MGP_CBAJ_T0061307.1 MGP_CBAJ_G0027095.1 mouse_genomes_project 3 95337367 95339615 + 2810403A07Rik protein_coding retained_intron MGP_CBAJ_T0061308.1 MGP_CBAJ_G0027095.1 mouse_genomes_project 3 95337380 95364337 + MGP_CBAJ_P0061308 2810403A07Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0061309.1 MGP_CBAJ_G0027095.1 mouse_genomes_project 3 95337380 95364045 + MGP_CBAJ_P0061309 2810403A07Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0061310.1 MGP_CBAJ_G0027095.1 mouse_genomes_project 3 95337386 95353112 + 2810403A07Rik protein_coding retained_intron MGP_CBAJ_T0061311.1 MGP_CBAJ_G0027095.1 mouse_genomes_project 3 95337390 95363486 + MGP_CBAJ_P0061311 2810403A07Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0061312.1 MGP_CBAJ_G0027095.1 mouse_genomes_project 3 95344883 95360391 + 2810403A07Rik protein_coding processed_transcript MGP_CBAJ_T0061313.1 MGP_CBAJ_G0027095.1 mouse_genomes_project 3 95350342 95352415 + 2810403A07Rik protein_coding retained_intron MGP_CBAJ_T0061314.1 MGP_CBAJ_G0027095.1 mouse_genomes_project 3 95351138 95360470 + 2810403A07Rik protein_coding retained_intron MGP_CBAJ_T0061315.1 MGP_CBAJ_G0027095.1 mouse_genomes_project 3 95360262 95362568 + 2810403A07Rik protein_coding processed_transcript MGP_CBAJ_T0004182.1 MGP_CBAJ_G0003677.1 mouse_genomes_project 3 85710042 85713144 - Gm37892 antisense antisense MGP_CBAJ_T0001146.1 MGP_CBAJ_G0001075.1 mouse_genomes_project 3 53305875 53308209 + TEC TEC MGP_CBAJ_T0014040.1 MGP_CBAJ_G0012152.1 mouse_genomes_project 3 113402876 113403594 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014000.1 MGP_CBAJ_G0012112.1 mouse_genomes_project 3 103403098 103403450 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013925.1 MGP_CBAJ_G0012037.1 mouse_genomes_project 3 75769825 75770266 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001232.1 MGP_CBAJ_G0001159.1 mouse_genomes_project 3 104884398 104885193 - TEC TEC MGP_CBAJ_T0064134.1 MGP_CBAJ_G0027693.1 mouse_genomes_project 3 174984504 175024954 + MGP_CBAJ_P0064134 Depdc1a protein_coding protein_coding MGP_CBAJ_T0064135.1 MGP_CBAJ_G0027693.1 mouse_genomes_project 3 174984522 175024575 + MGP_CBAJ_P0064135 Depdc1a protein_coding protein_coding MGP_CBAJ_T0064136.1 MGP_CBAJ_G0027693.1 mouse_genomes_project 3 174984529 175024458 + MGP_CBAJ_P0064136 Depdc1a protein_coding protein_coding MGP_CBAJ_T0004195.1 MGP_CBAJ_G0003686.1 mouse_genomes_project 3 95940221 95941833 - Gm16069 antisense antisense MGP_CBAJ_T0061878.1 MGP_CBAJ_G0027242.1 mouse_genomes_project 3 102733677 102768587 + protein_coding processed_transcript MGP_CBAJ_T0004275.1 MGP_CBAJ_G0003733.1 mouse_genomes_project 3 133543676 133558929 - Gm42835 antisense antisense MGP_CBAJ_T0004236.1 MGP_CBAJ_G0003713.1 mouse_genomes_project 3 111465353 111484759 - Tspan2os antisense antisense MGP_CBAJ_T0063692.1 MGP_CBAJ_G0027620.1 mouse_genomes_project 3 156050264 156164562 + MGP_CBAJ_P0063692 protein_coding protein_coding MGP_CBAJ_T0063747.1 MGP_CBAJ_G0027632.1 mouse_genomes_project 3 158823863 158852850 - MGP_CBAJ_P0063747 Clca1 protein_coding protein_coding MGP_CBAJ_T0063748.1 MGP_CBAJ_G0027632.1 mouse_genomes_project 3 158824603 158829220 - Clca1 protein_coding processed_transcript MGP_CBAJ_T0063749.1 MGP_CBAJ_G0027632.1 mouse_genomes_project 3 158834007 158839077 - Clca1 protein_coding processed_transcript MGP_CBAJ_T0063656.1 MGP_CBAJ_G0027613.1 mouse_genomes_project 3 154507743 154510095 - MGP_CBAJ_P0063656 Pdha2 protein_coding protein_coding MGP_CBAJ_T0001321.1 MGP_CBAJ_G0001247.1 mouse_genomes_project 3 147982409 147985105 - TEC TEC MGP_CBAJ_T0062719.1 MGP_CBAJ_G0027431.1 mouse_genomes_project 3 117081313 117095948 - MGP_CBAJ_P0062719 Ahcyl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062720.1 MGP_CBAJ_G0027431.1 mouse_genomes_project 3 117081315 117114759 - MGP_CBAJ_P0062720 Ahcyl1 protein_coding protein_coding MGP_CBAJ_T0062721.1 MGP_CBAJ_G0027431.1 mouse_genomes_project 3 117082148 117083792 - Ahcyl1 protein_coding processed_transcript MGP_CBAJ_T0062722.1 MGP_CBAJ_G0027431.1 mouse_genomes_project 3 117082678 117088770 - Ahcyl1 protein_coding retained_intron MGP_CBAJ_T0062723.1 MGP_CBAJ_G0027431.1 mouse_genomes_project 3 117083587 117085679 - Ahcyl1 protein_coding retained_intron MGP_CBAJ_T0062724.1 MGP_CBAJ_G0027431.1 mouse_genomes_project 3 117086445 117087705 - Ahcyl1 protein_coding retained_intron MGP_CBAJ_T0062725.1 MGP_CBAJ_G0027431.1 mouse_genomes_project 3 117089343 117114162 - MGP_CBAJ_P0062725 Ahcyl1 protein_coding protein_coding MGP_CBAJ_T0062726.1 MGP_CBAJ_G0027431.1 mouse_genomes_project 3 117089931 117114704 - Ahcyl1 protein_coding retained_intron MGP_CBAJ_T0059635.1 MGP_CBAJ_G0026743.1 mouse_genomes_project 3 5822281 5879122 + MGP_CBAJ_P0059635 Stmn2 protein_coding protein_coding MGP_CBAJ_T0059636.1 MGP_CBAJ_G0026743.1 mouse_genomes_project 3 5822436 5866347 + Stmn2 protein_coding retained_intron MGP_CBAJ_T0059637.1 MGP_CBAJ_G0026743.1 mouse_genomes_project 3 5822507 5856646 + Stmn2 protein_coding retained_intron MGP_CBAJ_T0059638.1 MGP_CBAJ_G0026743.1 mouse_genomes_project 3 5877780 5879091 + Stmn2 protein_coding processed_transcript MGP_CBAJ_T0062038.1 MGP_CBAJ_G0027269.1 mouse_genomes_project 3 103548664 103581724 + MGP_CBAJ_P0062038 Golph3l protein_coding protein_coding MGP_CBAJ_T0062039.1 MGP_CBAJ_G0027269.1 mouse_genomes_project 3 103548664 103581719 + MGP_CBAJ_P0062039 Golph3l protein_coding protein_coding MGP_CBAJ_T0062040.1 MGP_CBAJ_G0027269.1 mouse_genomes_project 3 103548664 103581724 + MGP_CBAJ_P0062040 Golph3l protein_coding protein_coding MGP_CBAJ_T0062041.1 MGP_CBAJ_G0027269.1 mouse_genomes_project 3 103548699 103581718 + MGP_CBAJ_P0062041 Golph3l protein_coding protein_coding MGP_CBAJ_T0062042.1 MGP_CBAJ_G0027269.1 mouse_genomes_project 3 103548699 103580041 + MGP_CBAJ_P0062042 Golph3l protein_coding protein_coding MGP_CBAJ_T0062043.1 MGP_CBAJ_G0027269.1 mouse_genomes_project 3 103548704 103581717 + MGP_CBAJ_P0062043 Golph3l protein_coding protein_coding MGP_CBAJ_T0062044.1 MGP_CBAJ_G0027269.1 mouse_genomes_project 3 103548711 103581718 + MGP_CBAJ_P0062044 Golph3l protein_coding nonsense_mediated_decay MGP_CBAJ_T0062045.1 MGP_CBAJ_G0027269.1 mouse_genomes_project 3 103548720 103579972 + MGP_CBAJ_P0062045 Golph3l protein_coding protein_coding MGP_CBAJ_T0062864.1 MGP_CBAJ_G0027463.1 mouse_genomes_project 3 118380270 118436799 - MGP_CBAJ_P0062864 Stxbp3 protein_coding protein_coding MGP_CBAJ_T0062865.1 MGP_CBAJ_G0027463.1 mouse_genomes_project 3 118381522 118389570 - Stxbp3 protein_coding retained_intron MGP_CBAJ_T0062866.1 MGP_CBAJ_G0027463.1 mouse_genomes_project 3 118381966 118384820 - Stxbp3 protein_coding retained_intron MGP_CBAJ_T0062867.1 MGP_CBAJ_G0027463.1 mouse_genomes_project 3 118387147 118392629 - Stxbp3 protein_coding retained_intron MGP_CBAJ_T0062868.1 MGP_CBAJ_G0027463.1 mouse_genomes_project 3 118396648 118436739 - MGP_CBAJ_P0062868 Stxbp3 protein_coding protein_coding MGP_CBAJ_T0062869.1 MGP_CBAJ_G0027463.1 mouse_genomes_project 3 118411642 118436803 - Stxbp3 protein_coding processed_transcript MGP_CBAJ_T0062870.1 MGP_CBAJ_G0027463.1 mouse_genomes_project 3 118414372 118436814 - MGP_CBAJ_P0062870 Stxbp3 protein_coding protein_coding MGP_CBAJ_T0062871.1 MGP_CBAJ_G0027463.1 mouse_genomes_project 3 118415459 118436798 - MGP_CBAJ_P0062871 Stxbp3 protein_coding protein_coding MGP_CBAJ_T0013877.1 MGP_CBAJ_G0011989.1 mouse_genomes_project 3 61598691 61602212 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0062945.1 MGP_CBAJ_G0027479.1 mouse_genomes_project 3 126057844 126062500 - MGP_CBAJ_P0062945 S1pr1 protein_coding protein_coding MGP_CBAJ_T0001132.1 MGP_CBAJ_G0001061.1 mouse_genomes_project 3 46517595 46520197 - TEC TEC MGP_CBAJ_T0014061.1 MGP_CBAJ_G0012173.1 mouse_genomes_project 3 120345088 120345422 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001243.1 MGP_CBAJ_G0001170.1 mouse_genomes_project 3 115849465 115851498 + TEC TEC MGP_CBAJ_T0061031.1 MGP_CBAJ_G0027042.1 mouse_genomes_project 3 92047697 92068679 - MGP_CBAJ_P0061031 Glt28d2 protein_coding protein_coding MGP_CBAJ_T0062919.1 MGP_CBAJ_G0027473.1 mouse_genomes_project 3 120004010 120008900 - MGP_CBAJ_P0062919 Prmt6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062920.1 MGP_CBAJ_G0027473.1 mouse_genomes_project 3 120004013 120008895 - MGP_CBAJ_P0062920 Prmt6 protein_coding protein_coding MGP_CBAJ_T0062921.1 MGP_CBAJ_G0027473.1 mouse_genomes_project 3 120006450 120008900 - MGP_CBAJ_P0062921 Prmt6 protein_coding protein_coding MGP_CBAJ_T0013885.1 MGP_CBAJ_G0011997.1 mouse_genomes_project 3 63975222 63975380 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011412.1 MGP_CBAJ_G0009550.1 mouse_genomes_project 3 76782328 76782419 + Gm27465 misc_RNA misc_RNA MGP_CBAJ_T0010440.1 MGP_CBAJ_G0008578.1 mouse_genomes_project 3 168216517 168216614 + Gm27405 miRNA miRNA MGP_CBAJ_T0001118.1 MGP_CBAJ_G0001047.1 mouse_genomes_project 3 38222445 38227838 + TEC TEC MGP_CBAJ_T0014141.1 MGP_CBAJ_G0012253.1 mouse_genomes_project 3 148689099 148691233 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098368.1 MGP_CBAJ_G0036634.1 mouse_genomes_project 3 113881252 113882995 - Gm42659 sense_intronic sense_intronic MGP_CBAJ_T0014024.1 MGP_CBAJ_G0012136.1 mouse_genomes_project 3 109774378 109774918 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0063397.1 MGP_CBAJ_G0027560.1 mouse_genomes_project 3 143060079 143061579 - MGP_CBAJ_P0063397 protein_coding protein_coding MGP_CBAJ_T0013864.1 MGP_CBAJ_G0011976.1 mouse_genomes_project 3 57607672 57610523 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098032.1 MGP_CBAJ_G0036305.1 mouse_genomes_project 3 24722416 24722524 + Gm22832 rRNA rRNA MGP_CBAJ_T0001086.1 MGP_CBAJ_G0001015.1 mouse_genomes_project 3 26940709 26941933 + TEC TEC MGP_CBAJ_T0062031.1 MGP_CBAJ_G0027266.1 mouse_genomes_project 3 103447189 103459288 + MGP_CBAJ_P0062031 Ctsk protein_coding protein_coding MGP_CBAJ_T0063045.1 MGP_CBAJ_G0027501.1 mouse_genomes_project 3 129271951 130233612 + MGP_CBAJ_P0063045 Dpyd protein_coding protein_coding MGP_CBAJ_T0063046.1 MGP_CBAJ_G0027501.1 mouse_genomes_project 3 129271952 129544424 + Dpyd protein_coding retained_intron MGP_CBAJ_T0063047.1 MGP_CBAJ_G0027501.1 mouse_genomes_project 3 129271999 129524333 + Dpyd protein_coding retained_intron MGP_CBAJ_T0063048.1 MGP_CBAJ_G0027501.1 mouse_genomes_project 3 129272002 129390845 + MGP_CBAJ_P0063048 Dpyd protein_coding protein_coding MGP_CBAJ_T0063049.1 MGP_CBAJ_G0027501.1 mouse_genomes_project 3 129272008 129272975 + Dpyd protein_coding retained_intron MGP_CBAJ_T0063050.1 MGP_CBAJ_G0027501.1 mouse_genomes_project 3 129559323 129659355 + Dpyd protein_coding retained_intron MGP_CBAJ_T0060893.1 MGP_CBAJ_G0027009.1 mouse_genomes_project 3 85283386 85315988 - MGP_CBAJ_P0060893 Tmem144 protein_coding protein_coding MGP_CBAJ_T0060894.1 MGP_CBAJ_G0027009.1 mouse_genomes_project 3 85283955 85313325 - MGP_CBAJ_P0060894 Tmem144 protein_coding protein_coding MGP_CBAJ_T0060895.1 MGP_CBAJ_G0027009.1 mouse_genomes_project 3 85284888 85315931 - MGP_CBAJ_P0060895 Tmem144 protein_coding unknown_likely_coding MGP_CBAJ_T0060896.1 MGP_CBAJ_G0027009.1 mouse_genomes_project 3 85302957 85325879 - MGP_CBAJ_P0060896 Tmem144 protein_coding protein_coding MGP_CBAJ_T0060897.1 MGP_CBAJ_G0027009.1 mouse_genomes_project 3 85310020 85325874 - MGP_CBAJ_P0060897 Tmem144 protein_coding protein_coding MGP_CBAJ_T0060898.1 MGP_CBAJ_G0027009.1 mouse_genomes_project 3 85310149 85316221 - Tmem144 protein_coding processed_transcript MGP_CBAJ_T0062416.1 MGP_CBAJ_G0027361.1 mouse_genomes_project 3 111577714 111729272 - MGP_CBAJ_P0062416 Sycp1 protein_coding protein_coding MGP_CBAJ_T0062417.1 MGP_CBAJ_G0027361.1 mouse_genomes_project 3 111577956 111729272 - MGP_CBAJ_P0062417 Sycp1 protein_coding protein_coding MGP_CBAJ_T0062418.1 MGP_CBAJ_G0027361.1 mouse_genomes_project 3 111716018 111729262 - MGP_CBAJ_P0062418 Sycp1 protein_coding protein_coding MGP_CBAJ_T0059991.1 MGP_CBAJ_G0026828.1 mouse_genomes_project 3 32374170 32408060 + MGP_CBAJ_P0059991 Pik3ca protein_coding protein_coding MGP_CBAJ_T0059992.1 MGP_CBAJ_G0026828.1 mouse_genomes_project 3 32402910 32404062 + Pik3ca protein_coding retained_intron MGP_CBAJ_T0062761.1 MGP_CBAJ_G0027440.1 mouse_genomes_project 3 117526285 117530553 - MGP_CBAJ_P0062761 Gstm4 protein_coding protein_coding MGP_CBAJ_T0101871.1 MGP_CBAJ_G0039902.1 mouse_genomes_project 3 115835482 115835897 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013870.1 MGP_CBAJ_G0011982.1 mouse_genomes_project 3 60337580 60338130 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0062962.1 MGP_CBAJ_G0027483.1 mouse_genomes_project 3 126490002 126510822 - MGP_CBAJ_P0062962 Vcam1 protein_coding protein_coding MGP_CBAJ_T0062963.1 MGP_CBAJ_G0027483.1 mouse_genomes_project 3 126497816 126501907 - Vcam1 protein_coding retained_intron MGP_CBAJ_T0062964.1 MGP_CBAJ_G0027483.1 mouse_genomes_project 3 126503471 126510591 - MGP_CBAJ_P0062964 Vcam1 protein_coding protein_coding MGP_CBAJ_T0062965.1 MGP_CBAJ_G0027483.1 mouse_genomes_project 3 126505810 126510061 - MGP_CBAJ_P0062965 Vcam1 protein_coding protein_coding MGP_CBAJ_T0007655.1 MGP_CBAJ_G0006255.1 mouse_genomes_project 3 160004112 160008239 + lincRNA lincRNA MGP_CBAJ_T0061369.1 MGP_CBAJ_G0027106.1 mouse_genomes_project 3 95897534 95916518 - MGP_CBAJ_P0061369 Hcn3 protein_coding protein_coding MGP_CBAJ_T0061370.1 MGP_CBAJ_G0027106.1 mouse_genomes_project 3 95903047 95905549 - Hcn3 protein_coding retained_intron MGP_CBAJ_T0061371.1 MGP_CBAJ_G0027106.1 mouse_genomes_project 3 95903164 95905531 - Hcn3 protein_coding retained_intron MGP_CBAJ_T0061372.1 MGP_CBAJ_G0027106.1 mouse_genomes_project 3 95905797 95916302 - Hcn3 protein_coding processed_transcript MGP_CBAJ_T0001130.1 MGP_CBAJ_G0001059.1 mouse_genomes_project 3 43450168 43450713 + TEC TEC MGP_CBAJ_T0004223.1 MGP_CBAJ_G0003704.1 mouse_genomes_project 3 104325785 104328825 - Gm20628 antisense antisense MGP_CBAJ_T0062311.1 MGP_CBAJ_G0027334.1 mouse_genomes_project 3 107167776 107174112 - MGP_CBAJ_P0062311 Hsd3b3 protein_coding protein_coding MGP_CBAJ_T0062312.1 MGP_CBAJ_G0027334.1 mouse_genomes_project 3 107167776 107174112 - MGP_CBAJ_P0062312 Hsd3b3 protein_coding protein_coding MGP_CBAJ_T0062313.1 MGP_CBAJ_G0027334.1 mouse_genomes_project 3 107167776 107194414 - MGP_CBAJ_P0062313 Hsd3b3 protein_coding protein_coding MGP_CBAJ_T0062314.1 MGP_CBAJ_G0027334.1 mouse_genomes_project 3 107168695 107194047 - MGP_CBAJ_P0062314 Hsd3b3 protein_coding protein_coding MGP_CBAJ_T0062315.1 MGP_CBAJ_G0027334.1 mouse_genomes_project 3 107189372 107194453 - Hsd3b3 protein_coding processed_transcript MGP_CBAJ_T0001327.1 MGP_CBAJ_G0001253.1 mouse_genomes_project 3 149511510 149512513 - TEC TEC MGP_CBAJ_T0013944.1 MGP_CBAJ_G0012056.1 mouse_genomes_project 3 83365659 83367223 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100447.1 MGP_CBAJ_G0038702.1 mouse_genomes_project 3 55846747 55846866 + Gm23675 snoRNA snoRNA MGP_CBAJ_T0062103.1 MGP_CBAJ_G0027278.1 mouse_genomes_project 3 103873317 103877026 - MGP_CBAJ_P0062103 Ciart protein_coding protein_coding MGP_CBAJ_T0062104.1 MGP_CBAJ_G0027278.1 mouse_genomes_project 3 103873319 103877052 - MGP_CBAJ_P0062104 Ciart protein_coding protein_coding MGP_CBAJ_T0062105.1 MGP_CBAJ_G0027278.1 mouse_genomes_project 3 103873619 103877072 - MGP_CBAJ_P0062105 Ciart protein_coding protein_coding MGP_CBAJ_T0062106.1 MGP_CBAJ_G0027278.1 mouse_genomes_project 3 103874325 103876067 - MGP_CBAJ_P0062106 Ciart protein_coding protein_coding MGP_CBAJ_T0062107.1 MGP_CBAJ_G0027278.1 mouse_genomes_project 3 103875272 103877024 - MGP_CBAJ_P0062107 Ciart protein_coding protein_coding MGP_CBAJ_T0062108.1 MGP_CBAJ_G0027278.1 mouse_genomes_project 3 103875493 103876895 - MGP_CBAJ_P0062108 Ciart protein_coding protein_coding MGP_CBAJ_T0059896.1 MGP_CBAJ_G0026810.1 mouse_genomes_project 3 28352556 28354536 + MGP_CBAJ_P0059896 Rpl22l1 protein_coding protein_coding MGP_CBAJ_T0059897.1 MGP_CBAJ_G0026810.1 mouse_genomes_project 3 28352589 28354545 + MGP_CBAJ_P0059897 Rpl22l1 protein_coding protein_coding MGP_CBAJ_T0059898.1 MGP_CBAJ_G0026810.1 mouse_genomes_project 3 28352628 28354536 + Rpl22l1 protein_coding retained_intron MGP_CBAJ_T0059899.1 MGP_CBAJ_G0026810.1 mouse_genomes_project 3 28352630 28354543 + MGP_CBAJ_P0059899 Rpl22l1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059900.1 MGP_CBAJ_G0026810.1 mouse_genomes_project 3 28352685 28353821 + Rpl22l1 protein_coding processed_transcript MGP_CBAJ_T0059901.1 MGP_CBAJ_G0026810.1 mouse_genomes_project 3 28352717 28354415 + Rpl22l1 protein_coding processed_transcript MGP_CBAJ_T0059902.1 MGP_CBAJ_G0026810.1 mouse_genomes_project 3 28352783 28354536 + Rpl22l1 protein_coding processed_transcript MGP_CBAJ_T0059903.1 MGP_CBAJ_G0026810.1 mouse_genomes_project 3 28353578 28354536 + Rpl22l1 protein_coding retained_intron MGP_CBAJ_T0059904.1 MGP_CBAJ_G0026810.1 mouse_genomes_project 3 28353619 28354537 + Rpl22l1 protein_coding retained_intron MGP_CBAJ_T0013898.1 MGP_CBAJ_G0012010.1 mouse_genomes_project 3 69645781 69646031 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001223.1 MGP_CBAJ_G0001150.1 mouse_genomes_project 3 97274216 97276773 + TEC TEC MGP_CBAJ_T0004198.1 MGP_CBAJ_G0003689.1 mouse_genomes_project 3 96176942 96183285 + Gm15417 antisense antisense MGP_CBAJ_T0004199.1 MGP_CBAJ_G0003689.1 mouse_genomes_project 3 96177062 96183285 + Gm15417 antisense antisense MGP_CBAJ_T0004200.1 MGP_CBAJ_G0003689.1 mouse_genomes_project 3 96179306 96183835 + Gm15417 antisense antisense MGP_CBAJ_T0004201.1 MGP_CBAJ_G0003689.1 mouse_genomes_project 3 96181012 96183207 + Gm15417 antisense antisense MGP_CBAJ_T0060755.1 MGP_CBAJ_G0026978.1 mouse_genomes_project 3 71930621 72562937 + MGP_CBAJ_P0060755 Schip1 protein_coding protein_coding MGP_CBAJ_T0060756.1 MGP_CBAJ_G0026978.1 mouse_genomes_project 3 71930621 72562937 + MGP_CBAJ_P0060756 Schip1 protein_coding protein_coding MGP_CBAJ_T0060757.1 MGP_CBAJ_G0026978.1 mouse_genomes_project 3 72389338 72562954 + MGP_CBAJ_P0060757 Schip1 protein_coding protein_coding MGP_CBAJ_T0060758.1 MGP_CBAJ_G0026978.1 mouse_genomes_project 3 72420446 72555137 + MGP_CBAJ_P0060758 Schip1 protein_coding protein_coding MGP_CBAJ_T0060759.1 MGP_CBAJ_G0026978.1 mouse_genomes_project 3 72421163 72562936 + MGP_CBAJ_P0060759 Schip1 protein_coding protein_coding MGP_CBAJ_T0060760.1 MGP_CBAJ_G0026978.1 mouse_genomes_project 3 72498683 72562937 + MGP_CBAJ_P0060760 Schip1 protein_coding protein_coding MGP_CBAJ_T0060761.1 MGP_CBAJ_G0026978.1 mouse_genomes_project 3 72516565 72562937 + MGP_CBAJ_P0060761 Schip1 protein_coding protein_coding MGP_CBAJ_T0060762.1 MGP_CBAJ_G0026978.1 mouse_genomes_project 3 72528567 72530556 + Schip1 protein_coding retained_intron MGP_CBAJ_T0014002.1 MGP_CBAJ_G0012114.1 mouse_genomes_project 3 103765217 103765364 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0062109.1 MGP_CBAJ_G0027279.1 mouse_genomes_project 3 103878774 103886808 - MGP_CBAJ_P0062109 BC028528 protein_coding protein_coding MGP_CBAJ_T0062110.1 MGP_CBAJ_G0027279.1 mouse_genomes_project 3 103878778 103886758 - MGP_CBAJ_P0062110 BC028528 protein_coding protein_coding MGP_CBAJ_T0062111.1 MGP_CBAJ_G0027279.1 mouse_genomes_project 3 103879791 103886733 - MGP_CBAJ_P0062111 BC028528 protein_coding protein_coding MGP_CBAJ_T0062112.1 MGP_CBAJ_G0027279.1 mouse_genomes_project 3 103882761 103886754 - BC028528 protein_coding processed_transcript MGP_CBAJ_T0062113.1 MGP_CBAJ_G0027279.1 mouse_genomes_project 3 103883248 103886784 - BC028528 protein_coding retained_intron MGP_CBAJ_T0017716.1 MGP_CBAJ_G0015255.1 mouse_genomes_project 3 104309006 104310665 - Gm20627 processed_transcript lincRNA MGP_CBAJ_T0017717.1 MGP_CBAJ_G0015255.1 mouse_genomes_project 3 104309008 104309857 - Gm20627 processed_transcript retained_intron MGP_CBAJ_T0007498.1 MGP_CBAJ_G0006133.1 mouse_genomes_project 3 92352784 92355557 + Gm37933 lincRNA lincRNA MGP_CBAJ_T0061794.1 MGP_CBAJ_G0027222.1 mouse_genomes_project 3 100906103 100915175 + MGP_CBAJ_P0061794 Tchh protein_coding protein_coding MGP_CBAJ_T0063420.1 MGP_CBAJ_G0027566.1 mouse_genomes_project 3 144268379 144373073 + MGP_CBAJ_P0063420 Dkk2 protein_coding protein_coding MGP_CBAJ_T0062588.1 MGP_CBAJ_G0027391.1 mouse_genomes_project 3 114003067 114020014 - MGP_CBAJ_P0062588 Wnt2b protein_coding protein_coding MGP_CBAJ_T0062589.1 MGP_CBAJ_G0027391.1 mouse_genomes_project 3 114018505 114019814 - Wnt2b protein_coding retained_intron MGP_CBAJ_T0060807.1 MGP_CBAJ_G0026989.1 mouse_genomes_project 3 73787509 73789986 + Nmd3 protein_coding retained_intron MGP_CBAJ_T0060808.1 MGP_CBAJ_G0026989.1 mouse_genomes_project 3 73787509 73824013 + MGP_CBAJ_P0060808 Nmd3 protein_coding protein_coding MGP_CBAJ_T0060809.1 MGP_CBAJ_G0026989.1 mouse_genomes_project 3 73787556 73800609 + MGP_CBAJ_P0060809 Nmd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060810.1 MGP_CBAJ_G0026989.1 mouse_genomes_project 3 73787607 73796059 + MGP_CBAJ_P0060810 Nmd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060811.1 MGP_CBAJ_G0026989.1 mouse_genomes_project 3 73787614 73797500 + Nmd3 protein_coding retained_intron MGP_CBAJ_T0060812.1 MGP_CBAJ_G0026989.1 mouse_genomes_project 3 73787779 73791934 + MGP_CBAJ_P0060812 Nmd3 protein_coding protein_coding MGP_CBAJ_T0060813.1 MGP_CBAJ_G0026989.1 mouse_genomes_project 3 73789760 73807605 + Nmd3 protein_coding retained_intron MGP_CBAJ_T0060814.1 MGP_CBAJ_G0026989.1 mouse_genomes_project 3 73813943 73816572 + Nmd3 protein_coding retained_intron MGP_CBAJ_T0007570.1 MGP_CBAJ_G0006186.1 mouse_genomes_project 3 127116285 127116709 + 4930512P04Rik lincRNA lincRNA MGP_CBAJ_T0061974.1 MGP_CBAJ_G0027257.1 mouse_genomes_project 3 103108520 103116177 + MGP_CBAJ_P0061974 Cdc42se1 protein_coding protein_coding MGP_CBAJ_T0061975.1 MGP_CBAJ_G0027257.1 mouse_genomes_project 3 103108598 103112149 + Cdc42se1 protein_coding retained_intron MGP_CBAJ_T0061976.1 MGP_CBAJ_G0027257.1 mouse_genomes_project 3 103108740 103114350 + MGP_CBAJ_P0061976 Cdc42se1 protein_coding protein_coding MGP_CBAJ_T0061978.1 MGP_CBAJ_G0027257.1 mouse_genomes_project 3 103112054 103114308 + MGP_CBAJ_P0061978 Cdc42se1 protein_coding protein_coding MGP_CBAJ_T0061979.1 MGP_CBAJ_G0027257.1 mouse_genomes_project 3 103112060 103114430 + MGP_CBAJ_P0061979 Cdc42se1 protein_coding protein_coding MGP_CBAJ_T0004211.1 MGP_CBAJ_G0003698.1 mouse_genomes_project 3 102825492 102831136 - Gm15265 antisense antisense MGP_CBAJ_T0004212.1 MGP_CBAJ_G0003698.1 mouse_genomes_project 3 102825526 102831559 - Gm15265 antisense antisense MGP_CBAJ_T0061535.1 MGP_CBAJ_G0027134.1 mouse_genomes_project 3 96587531 96605949 - MGP_CBAJ_P0061535 Chrnb2 protein_coding protein_coding MGP_CBAJ_T0061536.1 MGP_CBAJ_G0027134.1 mouse_genomes_project 3 96593769 96604742 - Chrnb2 protein_coding processed_transcript MGP_CBAJ_T0061537.1 MGP_CBAJ_G0027134.1 mouse_genomes_project 3 96593769 96605973 - MGP_CBAJ_P0061537 Chrnb2 protein_coding protein_coding MGP_CBAJ_T0007643.1 MGP_CBAJ_G0006246.1 mouse_genomes_project 3 157258334 157298319 - Gm6260 lincRNA lincRNA MGP_CBAJ_T0007644.1 MGP_CBAJ_G0006246.1 mouse_genomes_project 3 157280823 157298386 - Gm6260 lincRNA lincRNA MGP_CBAJ_T0098363.1 MGP_CBAJ_G0036629.1 mouse_genomes_project 3 113497136 113499424 - A530041M06Rik sense_intronic sense_intronic MGP_CBAJ_T0059799.1 MGP_CBAJ_G0026790.1 mouse_genomes_project 3 18767308 18847161 + MGP_CBAJ_P0059799 Hltf protein_coding nonsense_mediated_decay MGP_CBAJ_T0059800.1 MGP_CBAJ_G0026790.1 mouse_genomes_project 3 18767308 18848370 + MGP_CBAJ_P0059800 Hltf protein_coding protein_coding MGP_CBAJ_T0059801.1 MGP_CBAJ_G0026790.1 mouse_genomes_project 3 18767317 18837009 + Hltf protein_coding retained_intron MGP_CBAJ_T0059802.1 MGP_CBAJ_G0026790.1 mouse_genomes_project 3 18767350 18773557 + Hltf protein_coding retained_intron MGP_CBAJ_T0059803.1 MGP_CBAJ_G0026790.1 mouse_genomes_project 3 18767782 18848356 + MGP_CBAJ_P0059803 Hltf protein_coding nonsense_mediated_decay MGP_CBAJ_T0059804.1 MGP_CBAJ_G0026790.1 mouse_genomes_project 3 18836981 18848370 + Hltf protein_coding retained_intron MGP_CBAJ_T0099157.1 MGP_CBAJ_G0037412.1 mouse_genomes_project 3 41764116 41764274 + Gm22043 snRNA snRNA MGP_CBAJ_T0001074.1 MGP_CBAJ_G0001003.1 mouse_genomes_project 3 7856637 7857134 + TEC TEC MGP_CBAJ_T0059670.1 MGP_CBAJ_G0026755.1 mouse_genomes_project 3 7862240 7926362 - MGP_CBAJ_P0059670 Fabp12 protein_coding protein_coding MGP_CBAJ_T0059671.1 MGP_CBAJ_G0026755.1 mouse_genomes_project 3 7863949 7872771 - MGP_CBAJ_P0059671 Fabp12 protein_coding protein_coding MGP_CBAJ_T0059672.1 MGP_CBAJ_G0026755.1 mouse_genomes_project 3 7863949 7872744 - MGP_CBAJ_P0059672 Fabp12 protein_coding protein_coding MGP_CBAJ_T0059673.1 MGP_CBAJ_G0026755.1 mouse_genomes_project 3 7863982 7926353 - MGP_CBAJ_P0059673 Fabp12 protein_coding protein_coding MGP_CBAJ_T0100495.1 MGP_CBAJ_G0038750.1 mouse_genomes_project 3 156360716 156360809 + Gm25965 snoRNA snoRNA MGP_CBAJ_T0061745.1 MGP_CBAJ_G0027183.1 mouse_genomes_project 3 99689142 99690423 + MGP_CBAJ_P0061745 Sprr2i protein_coding protein_coding MGP_CBAJ_T0062493.1 MGP_CBAJ_G0027373.1 mouse_genomes_project 3 112669191 112676210 + MGP_CBAJ_P0062493 protein_coding protein_coding MGP_CBAJ_T0014004.1 MGP_CBAJ_G0012116.1 mouse_genomes_project 3 103891175 103897784 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100472.1 MGP_CBAJ_G0038727.1 mouse_genomes_project 3 104224232 104224359 + Gm22027 snoRNA snoRNA MGP_CBAJ_T0014109.1 MGP_CBAJ_G0012221.1 mouse_genomes_project 3 139247776 139248122 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013758.1 MGP_CBAJ_G0011870.1 mouse_genomes_project 3 17122783 17123982 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007574.1 MGP_CBAJ_G0006190.1 mouse_genomes_project 3 129145026 129146254 + Gm9916 lincRNA lincRNA MGP_CBAJ_T0098352.1 MGP_CBAJ_G0036618.1 mouse_genomes_project 3 113024881 113025949 - 9530097N15Rik sense_intronic sense_intronic MGP_CBAJ_T0060729.1 MGP_CBAJ_G0026970.1 mouse_genomes_project 3 70719327 71141820 + MGP_CBAJ_P0060729 Rsrc1 protein_coding protein_coding MGP_CBAJ_T0060730.1 MGP_CBAJ_G0026970.1 mouse_genomes_project 3 70723574 70734388 + MGP_CBAJ_P0060730 Rsrc1 protein_coding protein_coding MGP_CBAJ_T0060731.1 MGP_CBAJ_G0026970.1 mouse_genomes_project 3 70723576 71143664 + MGP_CBAJ_P0060731 Rsrc1 protein_coding protein_coding MGP_CBAJ_T0060732.1 MGP_CBAJ_G0026970.1 mouse_genomes_project 3 70723589 70835218 + Rsrc1 protein_coding retained_intron MGP_CBAJ_T0060733.1 MGP_CBAJ_G0026970.1 mouse_genomes_project 3 70723589 71138988 + MGP_CBAJ_P0060733 Rsrc1 protein_coding protein_coding MGP_CBAJ_T0060734.1 MGP_CBAJ_G0026970.1 mouse_genomes_project 3 70723607 71143659 + MGP_CBAJ_P0060734 Rsrc1 protein_coding protein_coding MGP_CBAJ_T0060735.1 MGP_CBAJ_G0026970.1 mouse_genomes_project 3 70723608 71141819 + MGP_CBAJ_P0060735 Rsrc1 protein_coding protein_coding MGP_CBAJ_T0060736.1 MGP_CBAJ_G0026970.1 mouse_genomes_project 3 70723871 71143665 + MGP_CBAJ_P0060736 Rsrc1 protein_coding protein_coding MGP_CBAJ_T0060737.1 MGP_CBAJ_G0026970.1 mouse_genomes_project 3 70723882 70732626 + MGP_CBAJ_P0060737 Rsrc1 protein_coding protein_coding MGP_CBAJ_T0060738.1 MGP_CBAJ_G0026970.1 mouse_genomes_project 3 70728878 70732807 + Rsrc1 protein_coding retained_intron MGP_CBAJ_T0063478.1 MGP_CBAJ_G0027578.1 mouse_genomes_project 3 147753085 147822713 + MGP_CBAJ_P0063478 Cenpe protein_coding protein_coding MGP_CBAJ_T0063479.1 MGP_CBAJ_G0027578.1 mouse_genomes_project 3 147782111 147786547 + MGP_CBAJ_P0063479 Cenpe protein_coding protein_coding MGP_CBAJ_T0063480.1 MGP_CBAJ_G0027578.1 mouse_genomes_project 3 147808343 147808783 + Cenpe protein_coding retained_intron MGP_CBAJ_T0063481.1 MGP_CBAJ_G0027578.1 mouse_genomes_project 3 147809146 147815280 + Cenpe protein_coding retained_intron MGP_CBAJ_T0063482.1 MGP_CBAJ_G0027578.1 mouse_genomes_project 3 147819728 147820260 + Cenpe protein_coding retained_intron MGP_CBAJ_T0100445.1 MGP_CBAJ_G0038700.1 mouse_genomes_project 3 51408307 51408435 + Gm22480 snoRNA snoRNA MGP_CBAJ_T0059694.1 MGP_CBAJ_G0026762.1 mouse_genomes_project 3 11801826 12184989 + MGP_CBAJ_P0059694 Ralyl protein_coding unknown_likely_coding MGP_CBAJ_T0059695.1 MGP_CBAJ_G0026762.1 mouse_genomes_project 3 12003854 12259827 + MGP_CBAJ_P0059695 Ralyl protein_coding protein_coding MGP_CBAJ_T0059696.1 MGP_CBAJ_G0026762.1 mouse_genomes_project 3 12003865 12260683 + MGP_CBAJ_P0059696 Ralyl protein_coding protein_coding MGP_CBAJ_T0059697.1 MGP_CBAJ_G0026762.1 mouse_genomes_project 3 12003872 12260990 + MGP_CBAJ_P0059697 Ralyl protein_coding protein_coding MGP_CBAJ_T0061775.1 MGP_CBAJ_G0027210.1 mouse_genomes_project 3 100201396 100203254 - MGP_CBAJ_P0061775 2310050C09Rik protein_coding protein_coding MGP_CBAJ_T0007676.1 MGP_CBAJ_G0006269.1 mouse_genomes_project 3 166623245 166626988 + lincRNA lincRNA MGP_CBAJ_T0101859.1 MGP_CBAJ_G0039890.1 mouse_genomes_project 3 96851446 96854624 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0063894.1 MGP_CBAJ_G0027659.1 mouse_genomes_project 3 166422516 166443474 - MGP_CBAJ_P0063894 Ifi44 protein_coding protein_coding MGP_CBAJ_T0063895.1 MGP_CBAJ_G0027659.1 mouse_genomes_project 3 166424020 166443396 - Ifi44 protein_coding processed_transcript MGP_CBAJ_T0063896.1 MGP_CBAJ_G0027659.1 mouse_genomes_project 3 166439204 166443461 - Ifi44 protein_coding retained_intron MGP_CBAJ_T0063897.1 MGP_CBAJ_G0027659.1 mouse_genomes_project 3 166439305 166443417 - Ifi44 protein_coding processed_transcript MGP_CBAJ_T0100430.1 MGP_CBAJ_G0038685.1 mouse_genomes_project 3 6018310 6018429 - Gm23670 snoRNA snoRNA MGP_CBAJ_T0007659.1 MGP_CBAJ_G0006259.1 mouse_genomes_project 3 161549959 161554336 + Gm37041 lincRNA lincRNA MGP_CBAJ_T0001092.1 MGP_CBAJ_G0001021.1 mouse_genomes_project 3 29973192 29975307 - TEC TEC MGP_CBAJ_T0004267.1 MGP_CBAJ_G0003727.1 mouse_genomes_project 3 120007916 120011608 + C130013H08Rik antisense antisense MGP_CBAJ_T0061157.1 MGP_CBAJ_G0027070.1 mouse_genomes_project 3 94497580 94503411 - Hapln2 protein_coding retained_intron MGP_CBAJ_T0061158.1 MGP_CBAJ_G0027070.1 mouse_genomes_project 3 94497891 94503306 - MGP_CBAJ_P0061158 Hapln2 protein_coding protein_coding MGP_CBAJ_T0061159.1 MGP_CBAJ_G0027070.1 mouse_genomes_project 3 94498468 94499504 - Hapln2 protein_coding retained_intron MGP_CBAJ_T0061160.1 MGP_CBAJ_G0027070.1 mouse_genomes_project 3 94499364 94503320 - MGP_CBAJ_P0061160 Hapln2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0017754.1 MGP_CBAJ_G0015268.1 mouse_genomes_project 3 139940648 140052362 - D030025E07Rik processed_transcript lincRNA MGP_CBAJ_T0017755.1 MGP_CBAJ_G0015268.1 mouse_genomes_project 3 139947814 139958158 - D030025E07Rik processed_transcript lincRNA MGP_CBAJ_T0017756.1 MGP_CBAJ_G0015268.1 mouse_genomes_project 3 139948191 140052365 - D030025E07Rik processed_transcript retained_intron MGP_CBAJ_T0017757.1 MGP_CBAJ_G0015268.1 mouse_genomes_project 3 139966703 140052312 - D030025E07Rik processed_transcript retained_intron MGP_CBAJ_T0017758.1 MGP_CBAJ_G0015268.1 mouse_genomes_project 3 140012661 140052351 - D030025E07Rik processed_transcript lincRNA MGP_CBAJ_T0013731.1 MGP_CBAJ_G0011843.1 mouse_genomes_project 3 8455621 8456132 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017740.1 MGP_CBAJ_G0015264.1 mouse_genomes_project 3 129140017 129143645 + Gm26871 processed_transcript lincRNA MGP_CBAJ_T0017741.1 MGP_CBAJ_G0015264.1 mouse_genomes_project 3 129143482 129224695 + Gm26871 processed_transcript lincRNA MGP_CBAJ_T0017742.1 MGP_CBAJ_G0015264.1 mouse_genomes_project 3 129143607 129226779 + Gm26871 processed_transcript lincRNA MGP_CBAJ_T0017743.1 MGP_CBAJ_G0015264.1 mouse_genomes_project 3 129143618 129183612 + Gm26871 processed_transcript lincRNA MGP_CBAJ_T0017744.1 MGP_CBAJ_G0015264.1 mouse_genomes_project 3 129143651 129239873 + Gm26871 processed_transcript lincRNA MGP_CBAJ_T0017745.1 MGP_CBAJ_G0015264.1 mouse_genomes_project 3 129167962 129171006 + Gm26871 processed_transcript retained_intron MGP_CBAJ_T0059873.1 MGP_CBAJ_G0026806.1 mouse_genomes_project 3 27742150 28193002 + MGP_CBAJ_P0059873 Tnik protein_coding nonsense_mediated_decay MGP_CBAJ_T0059874.1 MGP_CBAJ_G0026806.1 mouse_genomes_project 3 27742151 28198276 + MGP_CBAJ_P0059874 Tnik protein_coding protein_coding MGP_CBAJ_T0059875.1 MGP_CBAJ_G0026806.1 mouse_genomes_project 3 27742212 27848082 + Tnik protein_coding retained_intron MGP_CBAJ_T0059876.1 MGP_CBAJ_G0026806.1 mouse_genomes_project 3 27742212 28004274 + Tnik protein_coding retained_intron MGP_CBAJ_T0059877.1 MGP_CBAJ_G0026806.1 mouse_genomes_project 3 27742499 28188867 + Tnik protein_coding retained_intron MGP_CBAJ_T0059878.1 MGP_CBAJ_G0026806.1 mouse_genomes_project 3 27742499 28190640 + MGP_CBAJ_P0059878 Tnik protein_coding protein_coding MGP_CBAJ_T0059879.1 MGP_CBAJ_G0026806.1 mouse_genomes_project 3 27742499 28190640 + MGP_CBAJ_P0059879 Tnik protein_coding protein_coding MGP_CBAJ_T0059880.1 MGP_CBAJ_G0026806.1 mouse_genomes_project 3 27742518 27743789 + Tnik protein_coding retained_intron MGP_CBAJ_T0059881.1 MGP_CBAJ_G0026806.1 mouse_genomes_project 3 27742579 28190399 + MGP_CBAJ_P0059881 Tnik protein_coding protein_coding MGP_CBAJ_T0059882.1 MGP_CBAJ_G0026806.1 mouse_genomes_project 3 27742579 28190399 + MGP_CBAJ_P0059882 Tnik protein_coding protein_coding MGP_CBAJ_T0059883.1 MGP_CBAJ_G0026806.1 mouse_genomes_project 3 27742579 28190399 + MGP_CBAJ_P0059883 Tnik protein_coding protein_coding MGP_CBAJ_T0059884.1 MGP_CBAJ_G0026806.1 mouse_genomes_project 3 27742579 28190399 + MGP_CBAJ_P0059884 Tnik protein_coding protein_coding MGP_CBAJ_T0059885.1 MGP_CBAJ_G0026806.1 mouse_genomes_project 3 27742579 28190399 + MGP_CBAJ_P0059885 Tnik protein_coding protein_coding MGP_CBAJ_T0059886.1 MGP_CBAJ_G0026806.1 mouse_genomes_project 3 27906091 28109313 + Tnik protein_coding processed_transcript MGP_CBAJ_T0059887.1 MGP_CBAJ_G0026806.1 mouse_genomes_project 3 28040325 28042140 + Tnik protein_coding retained_intron MGP_CBAJ_T0059888.1 MGP_CBAJ_G0026806.1 mouse_genomes_project 3 28145106 28153660 + Tnik protein_coding retained_intron MGP_CBAJ_T0059889.1 MGP_CBAJ_G0026806.1 mouse_genomes_project 3 28169481 28188363 + Tnik protein_coding retained_intron MGP_CBAJ_T0059890.1 MGP_CBAJ_G0026806.1 mouse_genomes_project 3 28189262 28191166 + Tnik protein_coding retained_intron MGP_CBAJ_T0062987.1 MGP_CBAJ_G0027489.1 mouse_genomes_project 3 127028403 127061966 - MGP_CBAJ_P0062987 Trmt13 protein_coding protein_coding MGP_CBAJ_T0062988.1 MGP_CBAJ_G0027489.1 mouse_genomes_project 3 127028404 127042137 - MGP_CBAJ_P0062988 Trmt13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062989.1 MGP_CBAJ_G0027489.1 mouse_genomes_project 3 127028405 127042161 - MGP_CBAJ_P0062989 Trmt13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062990.1 MGP_CBAJ_G0027489.1 mouse_genomes_project 3 127028646 127030787 - Trmt13 protein_coding processed_transcript MGP_CBAJ_T0062991.1 MGP_CBAJ_G0027489.1 mouse_genomes_project 3 127031434 127042188 - Trmt13 protein_coding retained_intron MGP_CBAJ_T0062992.1 MGP_CBAJ_G0027489.1 mouse_genomes_project 3 127033121 127041986 - MGP_CBAJ_P0062992 Trmt13 protein_coding protein_coding MGP_CBAJ_T0062993.1 MGP_CBAJ_G0027489.1 mouse_genomes_project 3 127036870 127041969 - MGP_CBAJ_P0062993 Trmt13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062994.1 MGP_CBAJ_G0027489.1 mouse_genomes_project 3 127039290 127042102 - Trmt13 protein_coding retained_intron MGP_CBAJ_T0062995.1 MGP_CBAJ_G0027489.1 mouse_genomes_project 3 127041259 127042139 - MGP_CBAJ_P0062995 Trmt13 protein_coding protein_coding MGP_CBAJ_T0063000.1 MGP_CBAJ_G0027489.1 mouse_genomes_project 3 127042695 127061500 - Trmt13 protein_coding processed_transcript MGP_CBAJ_T0063002.1 MGP_CBAJ_G0027489.1 mouse_genomes_project 3 127060918 127061787 - Trmt13 protein_coding retained_intron MGP_CBAJ_T0060839.1 MGP_CBAJ_G0026998.1 mouse_genomes_project 3 80433836 80441156 - Pdcd10 protein_coding retained_intron MGP_CBAJ_T0060840.1 MGP_CBAJ_G0026998.1 mouse_genomes_project 3 80434036 80478411 - MGP_CBAJ_P0060840 Pdcd10 protein_coding protein_coding MGP_CBAJ_T0060841.1 MGP_CBAJ_G0026998.1 mouse_genomes_project 3 80449004 80478378 - MGP_CBAJ_P0060841 Pdcd10 protein_coding protein_coding MGP_CBAJ_T0060842.1 MGP_CBAJ_G0026998.1 mouse_genomes_project 3 80453510 80478456 - Pdcd10 protein_coding retained_intron MGP_CBAJ_T0013940.1 MGP_CBAJ_G0012052.1 mouse_genomes_project 3 82798057 82799328 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099192.1 MGP_CBAJ_G0037447.1 mouse_genomes_project 3 96854000 96854165 - Gm24046 snRNA snRNA MGP_CBAJ_T0013899.1 MGP_CBAJ_G0012011.1 mouse_genomes_project 3 69665770 69668347 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014189.1 MGP_CBAJ_G0012301.1 mouse_genomes_project 3 171289543 171292613 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061845.1 MGP_CBAJ_G0027236.1 mouse_genomes_project 3 102163429 102250576 - MGP_CBAJ_P0061845 Snx27 protein_coding protein_coding MGP_CBAJ_T0061846.1 MGP_CBAJ_G0027236.1 mouse_genomes_project 3 102165197 102250409 - MGP_CBAJ_P0061846 Snx27 protein_coding protein_coding MGP_CBAJ_T0061847.1 MGP_CBAJ_G0027236.1 mouse_genomes_project 3 102166926 102194266 - Snx27 protein_coding processed_transcript MGP_CBAJ_T0061848.1 MGP_CBAJ_G0027236.1 mouse_genomes_project 3 102167012 102250539 - MGP_CBAJ_P0061848 Snx27 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061849.1 MGP_CBAJ_G0027236.1 mouse_genomes_project 3 102167022 102189073 - Snx27 protein_coding processed_transcript MGP_CBAJ_T0061850.1 MGP_CBAJ_G0027236.1 mouse_genomes_project 3 102167941 102227310 - MGP_CBAJ_P0061850 Snx27 protein_coding protein_coding MGP_CBAJ_T0061851.1 MGP_CBAJ_G0027236.1 mouse_genomes_project 3 102189091 102227073 - MGP_CBAJ_P0061851 Snx27 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061852.1 MGP_CBAJ_G0027236.1 mouse_genomes_project 3 102201178 102201827 - Snx27 protein_coding processed_transcript MGP_CBAJ_T0061265.1 MGP_CBAJ_G0027091.1 mouse_genomes_project 3 95193129 95209293 + MGP_CBAJ_P0061265 Ubqln4 protein_coding protein_coding MGP_CBAJ_T0061266.1 MGP_CBAJ_G0027091.1 mouse_genomes_project 3 95193138 95203115 + Ubqln4 protein_coding retained_intron MGP_CBAJ_T0061267.1 MGP_CBAJ_G0027091.1 mouse_genomes_project 3 95193170 95196292 + MGP_CBAJ_P0061267 Ubqln4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061268.1 MGP_CBAJ_G0027091.1 mouse_genomes_project 3 95196156 95204070 + Ubqln4 protein_coding processed_transcript MGP_CBAJ_T0061269.1 MGP_CBAJ_G0027091.1 mouse_genomes_project 3 95203462 95204830 + Ubqln4 protein_coding retained_intron MGP_CBAJ_T0007551.1 MGP_CBAJ_G0006171.1 mouse_genomes_project 3 114842871 114844118 - Gm43848 lincRNA lincRNA MGP_CBAJ_T0062734.1 MGP_CBAJ_G0027433.1 mouse_genomes_project 3 117329678 117348600 + MGP_CBAJ_P0062734 Eps8l3 protein_coding protein_coding MGP_CBAJ_T0062735.1 MGP_CBAJ_G0027433.1 mouse_genomes_project 3 117329693 117333703 + Eps8l3 protein_coding processed_transcript MGP_CBAJ_T0062736.1 MGP_CBAJ_G0027433.1 mouse_genomes_project 3 117329711 117334079 + MGP_CBAJ_P0062736 Eps8l3 protein_coding protein_coding MGP_CBAJ_T0014090.1 MGP_CBAJ_G0012202.1 mouse_genomes_project 3 132225045 132225649 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013985.1 MGP_CBAJ_G0012097.1 mouse_genomes_project 3 100282798 100283190 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061812.1 MGP_CBAJ_G0027231.1 mouse_genomes_project 3 102067921 102091531 + MGP_CBAJ_P0061812 Tdrkh protein_coding protein_coding MGP_CBAJ_T0061813.1 MGP_CBAJ_G0027231.1 mouse_genomes_project 3 102067948 102080376 + MGP_CBAJ_P0061813 Tdrkh protein_coding nonsense_mediated_decay MGP_CBAJ_T0061814.1 MGP_CBAJ_G0027231.1 mouse_genomes_project 3 102067966 102088369 + MGP_CBAJ_P0061814 Tdrkh protein_coding protein_coding MGP_CBAJ_T0061815.1 MGP_CBAJ_G0027231.1 mouse_genomes_project 3 102067966 102088353 + MGP_CBAJ_P0061815 Tdrkh protein_coding protein_coding MGP_CBAJ_T0061816.1 MGP_CBAJ_G0027231.1 mouse_genomes_project 3 102077540 102088371 + MGP_CBAJ_P0061816 Tdrkh protein_coding protein_coding MGP_CBAJ_T0061817.1 MGP_CBAJ_G0027231.1 mouse_genomes_project 3 102077540 102088358 + MGP_CBAJ_P0061817 Tdrkh protein_coding protein_coding MGP_CBAJ_T0061760.1 MGP_CBAJ_G0027196.1 mouse_genomes_project 3 99979841 99981118 - MGP_CBAJ_P0061760 Lce1b protein_coding protein_coding MGP_CBAJ_T0007483.1 MGP_CBAJ_G0006119.1 mouse_genomes_project 3 85548198 85722963 + A330069K06Rik lincRNA lincRNA MGP_CBAJ_T0001085.1 MGP_CBAJ_G0001014.1 mouse_genomes_project 3 24306641 24306835 + TEC TEC MGP_CBAJ_T0014166.1 MGP_CBAJ_G0012278.1 mouse_genomes_project 3 157452933 157453758 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063036.1 MGP_CBAJ_G0027498.1 mouse_genomes_project 3 127895171 127943172 - MGP_CBAJ_P0063036 Plppr4 protein_coding protein_coding MGP_CBAJ_T0063037.1 MGP_CBAJ_G0027498.1 mouse_genomes_project 3 127897071 127943172 - Plppr4 protein_coding retained_intron MGP_CBAJ_T0063038.1 MGP_CBAJ_G0027498.1 mouse_genomes_project 3 127897878 127942544 - MGP_CBAJ_P0063038 Plppr4 protein_coding protein_coding MGP_CBAJ_T0059742.1 MGP_CBAJ_G0026779.1 mouse_genomes_project 3 16574936 16766609 - MGP_CBAJ_P0059742 Cyp7b1 protein_coding protein_coding MGP_CBAJ_T0060463.1 MGP_CBAJ_G0026907.1 mouse_genomes_project 3 57241749 57268171 + MGP_CBAJ_P0060463 Alg5 protein_coding protein_coding MGP_CBAJ_T0060464.1 MGP_CBAJ_G0026907.1 mouse_genomes_project 3 57241769 57269694 + MGP_CBAJ_P0060464 Alg5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060465.1 MGP_CBAJ_G0026907.1 mouse_genomes_project 3 57241777 57263848 + MGP_CBAJ_P0060465 Alg5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060466.1 MGP_CBAJ_G0026907.1 mouse_genomes_project 3 57241783 57248908 + Alg5 protein_coding retained_intron MGP_CBAJ_T0062897.1 MGP_CBAJ_G0027470.1 mouse_genomes_project 3 118780121 118828574 + MGP_CBAJ_P0062897 Slc25a24 protein_coding protein_coding MGP_CBAJ_T0062898.1 MGP_CBAJ_G0027470.1 mouse_genomes_project 3 118780134 118818653 + MGP_CBAJ_P0062898 Slc25a24 protein_coding nonsense_mediated_decay MGP_CBAJ_T0007547.1 MGP_CBAJ_G0006167.1 mouse_genomes_project 3 111459375 111460640 + Gm42682 lincRNA lincRNA MGP_CBAJ_T0001215.1 MGP_CBAJ_G0001142.1 mouse_genomes_project 3 90021528 90025996 - TEC TEC MGP_CBAJ_T0014191.1 MGP_CBAJ_G0012303.1 mouse_genomes_project 3 172765893 172766663 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014029.1 MGP_CBAJ_G0012141.1 mouse_genomes_project 3 110777272 110777957 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010427.1 MGP_CBAJ_G0008565.1 mouse_genomes_project 3 139287984 139288050 + Mir302d miRNA miRNA MGP_CBAJ_T0064022.1 MGP_CBAJ_G0027676.1 mouse_genomes_project 3 168914699 168940636 - MGP_CBAJ_P0064022 Acadm protein_coding protein_coding MGP_CBAJ_T0064023.1 MGP_CBAJ_G0027676.1 mouse_genomes_project 3 168921899 168926359 - Acadm protein_coding retained_intron MGP_CBAJ_T0064024.1 MGP_CBAJ_G0027676.1 mouse_genomes_project 3 168922040 168933827 - Acadm protein_coding retained_intron MGP_CBAJ_T0064025.1 MGP_CBAJ_G0027676.1 mouse_genomes_project 3 168926340 168932811 - Acadm protein_coding retained_intron MGP_CBAJ_T0064026.1 MGP_CBAJ_G0027676.1 mouse_genomes_project 3 168932325 168934692 - Acadm protein_coding retained_intron MGP_CBAJ_T0064027.1 MGP_CBAJ_G0027676.1 mouse_genomes_project 3 168932331 168940471 - MGP_CBAJ_P0064027 Acadm protein_coding nonsense_mediated_decay MGP_CBAJ_T0064028.1 MGP_CBAJ_G0027676.1 mouse_genomes_project 3 168932385 168940450 - MGP_CBAJ_P0064028 Acadm protein_coding protein_coding MGP_CBAJ_T0064029.1 MGP_CBAJ_G0027676.1 mouse_genomes_project 3 168934312 168940446 - Acadm protein_coding retained_intron MGP_CBAJ_T0064030.1 MGP_CBAJ_G0027676.1 mouse_genomes_project 3 168934674 168937904 - Acadm protein_coding retained_intron MGP_CBAJ_T0064031.1 MGP_CBAJ_G0027676.1 mouse_genomes_project 3 168937602 168940467 - Acadm protein_coding retained_intron MGP_CBAJ_T0099233.1 MGP_CBAJ_G0037488.1 mouse_genomes_project 3 172712559 172712666 + Gm22458 snRNA snRNA MGP_CBAJ_T0007663.1 MGP_CBAJ_G0006262.1 mouse_genomes_project 3 163587895 163778425 - Gm30382 lincRNA lincRNA MGP_CBAJ_T0007664.1 MGP_CBAJ_G0006262.1 mouse_genomes_project 3 163588353 163638321 - Gm30382 lincRNA lincRNA MGP_CBAJ_T0007666.1 MGP_CBAJ_G0006262.1 mouse_genomes_project 3 163625013 163778450 - Gm30382 lincRNA lincRNA MGP_CBAJ_T0062976.1 MGP_CBAJ_G0027486.1 mouse_genomes_project 3 126931255 126953008 - MGP_CBAJ_P0062976 Rtca protein_coding protein_coding MGP_CBAJ_T0062977.1 MGP_CBAJ_G0027486.1 mouse_genomes_project 3 126931532 126940765 - Rtca protein_coding retained_intron MGP_CBAJ_T0062978.1 MGP_CBAJ_G0027486.1 mouse_genomes_project 3 126938950 126952824 - MGP_CBAJ_P0062978 Rtca protein_coding nonsense_mediated_decay MGP_CBAJ_T0062979.1 MGP_CBAJ_G0027486.1 mouse_genomes_project 3 126940490 126952865 - MGP_CBAJ_P0062979 Rtca protein_coding protein_coding MGP_CBAJ_T0062980.1 MGP_CBAJ_G0027486.1 mouse_genomes_project 3 126944345 126952933 - MGP_CBAJ_P0062980 Rtca protein_coding nonsense_mediated_decay MGP_CBAJ_T0098319.1 MGP_CBAJ_G0036586.1 mouse_genomes_project 3 84992627 84996136 - sense_intronic sense_intronic MGP_CBAJ_T0061989.1 MGP_CBAJ_G0027261.1 mouse_genomes_project 3 103173616 103178235 + Fam63a protein_coding processed_transcript MGP_CBAJ_T0061990.1 MGP_CBAJ_G0027261.1 mouse_genomes_project 3 103173688 103180108 + Fam63a protein_coding processed_transcript MGP_CBAJ_T0061991.1 MGP_CBAJ_G0027261.1 mouse_genomes_project 3 103173758 103175788 + Fam63a protein_coding processed_transcript MGP_CBAJ_T0061992.1 MGP_CBAJ_G0027261.1 mouse_genomes_project 3 103174116 103177129 + Fam63a protein_coding processed_transcript MGP_CBAJ_T0061993.1 MGP_CBAJ_G0027261.1 mouse_genomes_project 3 103175215 103191542 + MGP_CBAJ_P0061993 Fam63a protein_coding protein_coding MGP_CBAJ_T0061994.1 MGP_CBAJ_G0027261.1 mouse_genomes_project 3 103175215 103191542 + MGP_CBAJ_P0061994 Fam63a protein_coding protein_coding MGP_CBAJ_T0061995.1 MGP_CBAJ_G0027261.1 mouse_genomes_project 3 103175486 103187183 + Fam63a protein_coding retained_intron MGP_CBAJ_T0061996.1 MGP_CBAJ_G0027261.1 mouse_genomes_project 3 103175873 103180108 + Fam63a protein_coding processed_transcript MGP_CBAJ_T0061997.1 MGP_CBAJ_G0027261.1 mouse_genomes_project 3 103178110 103180286 + MGP_CBAJ_P0061997 Fam63a protein_coding protein_coding MGP_CBAJ_T0061998.1 MGP_CBAJ_G0027261.1 mouse_genomes_project 3 103178470 103180232 + Fam63a protein_coding processed_transcript MGP_CBAJ_T0061999.1 MGP_CBAJ_G0027261.1 mouse_genomes_project 3 103180219 103191539 + MGP_CBAJ_P0061999 Fam63a protein_coding protein_coding MGP_CBAJ_T0062000.1 MGP_CBAJ_G0027261.1 mouse_genomes_project 3 103187361 103191537 + Fam63a protein_coding processed_transcript MGP_CBAJ_T0007524.1 MGP_CBAJ_G0006147.1 mouse_genomes_project 3 103848993 103854401 + Gm26594 lincRNA lincRNA MGP_CBAJ_T0060834.1 MGP_CBAJ_G0026997.1 mouse_genomes_project 3 80175219 80395903 - MGP_CBAJ_P0060834 Wdr49 protein_coding unknown_likely_coding MGP_CBAJ_T0060835.1 MGP_CBAJ_G0026997.1 mouse_genomes_project 3 80175219 80395953 - MGP_CBAJ_P0060835 Wdr49 protein_coding protein_coding MGP_CBAJ_T0060836.1 MGP_CBAJ_G0026997.1 mouse_genomes_project 3 80317933 80366002 - MGP_CBAJ_P0060836 Wdr49 protein_coding protein_coding MGP_CBAJ_T0060837.1 MGP_CBAJ_G0026997.1 mouse_genomes_project 3 80317933 80395954 - MGP_CBAJ_P0060837 Wdr49 protein_coding protein_coding MGP_CBAJ_T0060838.1 MGP_CBAJ_G0026997.1 mouse_genomes_project 3 80393614 80396369 - Wdr49 protein_coding retained_intron MGP_CBAJ_T0001251.1 MGP_CBAJ_G0001178.1 mouse_genomes_project 3 120423003 120425572 + TEC TEC MGP_CBAJ_T0013751.1 MGP_CBAJ_G0011863.1 mouse_genomes_project 3 14392076 14392251 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0063273.1 MGP_CBAJ_G0027536.1 mouse_genomes_project 3 139276266 139291926 - MGP_CBAJ_P0063273 protein_coding protein_coding MGP_CBAJ_T0063274.1 MGP_CBAJ_G0027536.1 mouse_genomes_project 3 139286522 139291918 - protein_coding retained_intron MGP_CBAJ_T0063276.1 MGP_CBAJ_G0027536.1 mouse_genomes_project 3 139290847 139297540 - protein_coding retained_intron MGP_CBAJ_T0063277.1 MGP_CBAJ_G0027536.1 mouse_genomes_project 3 139291510 139297690 - MGP_CBAJ_P0063277 protein_coding protein_coding MGP_CBAJ_T0014060.1 MGP_CBAJ_G0012172.1 mouse_genomes_project 3 120171006 120171649 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0064036.1 MGP_CBAJ_G0027678.1 mouse_genomes_project 3 169368179 169392416 - MGP_CBAJ_P0064036 Lhx8 protein_coding protein_coding MGP_CBAJ_T0064037.1 MGP_CBAJ_G0027678.1 mouse_genomes_project 3 169368181 169391816 - MGP_CBAJ_P0064037 Lhx8 protein_coding protein_coding MGP_CBAJ_T0064038.1 MGP_CBAJ_G0027678.1 mouse_genomes_project 3 169368863 169389923 - MGP_CBAJ_P0064038 Lhx8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064039.1 MGP_CBAJ_G0027678.1 mouse_genomes_project 3 169378530 169386652 - Lhx8 protein_coding retained_intron MGP_CBAJ_T0064040.1 MGP_CBAJ_G0027678.1 mouse_genomes_project 3 169384025 169390391 - MGP_CBAJ_P0064040 Lhx8 protein_coding protein_coding MGP_CBAJ_T0098358.1 MGP_CBAJ_G0036624.1 mouse_genomes_project 3 113110358 113111074 - C030032O16Rik sense_intronic sense_intronic MGP_CBAJ_T0100500.1 MGP_CBAJ_G0038755.1 mouse_genomes_project 3 168808634 168808757 + Gm25757 snoRNA snoRNA MGP_CBAJ_T0013727.1 MGP_CBAJ_G0011839.1 mouse_genomes_project 3 7542660 7543474 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001229.1 MGP_CBAJ_G0001156.1 mouse_genomes_project 3 103967038 103969518 + TEC TEC MGP_CBAJ_T0014120.1 MGP_CBAJ_G0012232.1 mouse_genomes_project 3 143060254 143061555 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001082.1 MGP_CBAJ_G0001011.1 mouse_genomes_project 3 19173211 19173457 + TEC TEC MGP_CBAJ_T0062879.1 MGP_CBAJ_G0027465.1 mouse_genomes_project 3 118507986 118517108 - MGP_CBAJ_P0062879 Prpf38b protein_coding nonsense_mediated_decay MGP_CBAJ_T0062880.1 MGP_CBAJ_G0027465.1 mouse_genomes_project 3 118507988 118517139 - MGP_CBAJ_P0062880 Prpf38b protein_coding protein_coding MGP_CBAJ_T0062881.1 MGP_CBAJ_G0027465.1 mouse_genomes_project 3 118508328 118516880 - MGP_CBAJ_P0062881 Prpf38b protein_coding nonsense_mediated_decay MGP_CBAJ_T0062882.1 MGP_CBAJ_G0027465.1 mouse_genomes_project 3 118509447 118510997 - Prpf38b protein_coding retained_intron MGP_CBAJ_T0062883.1 MGP_CBAJ_G0027465.1 mouse_genomes_project 3 118509662 118511530 - Prpf38b protein_coding processed_transcript MGP_CBAJ_T0062884.1 MGP_CBAJ_G0027465.1 mouse_genomes_project 3 118509807 118513393 - Prpf38b protein_coding processed_transcript MGP_CBAJ_T0062885.1 MGP_CBAJ_G0027465.1 mouse_genomes_project 3 118511972 118517122 - Prpf38b protein_coding retained_intron MGP_CBAJ_T0062886.1 MGP_CBAJ_G0027465.1 mouse_genomes_project 3 118511975 118516041 - Prpf38b protein_coding retained_intron MGP_CBAJ_T0100458.1 MGP_CBAJ_G0038713.1 mouse_genomes_project 3 84333236 84333368 + Gm23440 snoRNA snoRNA MGP_CBAJ_T0062231.1 MGP_CBAJ_G0027313.1 mouse_genomes_project 3 105011356 105039855 + MGP_CBAJ_P0062231 Pdzk1 protein_coding protein_coding MGP_CBAJ_T0062232.1 MGP_CBAJ_G0027313.1 mouse_genomes_project 3 105011535 105039940 + MGP_CBAJ_P0062232 Pdzk1 protein_coding protein_coding MGP_CBAJ_T0062233.1 MGP_CBAJ_G0027313.1 mouse_genomes_project 3 105012148 105059066 + MGP_CBAJ_P0062233 Pdzk1 protein_coding protein_coding MGP_CBAJ_T0062234.1 MGP_CBAJ_G0027313.1 mouse_genomes_project 3 105014226 105058886 + MGP_CBAJ_P0062234 Pdzk1 protein_coding protein_coding MGP_CBAJ_T0062235.1 MGP_CBAJ_G0027313.1 mouse_genomes_project 3 105014243 105058612 + MGP_CBAJ_P0062235 Pdzk1 protein_coding protein_coding MGP_CBAJ_T0062236.1 MGP_CBAJ_G0027313.1 mouse_genomes_project 3 105014243 105058736 + MGP_CBAJ_P0062236 Pdzk1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062237.1 MGP_CBAJ_G0027313.1 mouse_genomes_project 3 105017812 105038576 + MGP_CBAJ_P0062237 Pdzk1 protein_coding protein_coding MGP_CBAJ_T0062556.1 MGP_CBAJ_G0027385.1 mouse_genomes_project 3 113799265 113811829 - MGP_CBAJ_P0062556 Fam19a3 protein_coding protein_coding MGP_CBAJ_T0062557.1 MGP_CBAJ_G0027385.1 mouse_genomes_project 3 113811642 113816124 - Fam19a3 protein_coding processed_transcript MGP_CBAJ_T0061255.1 MGP_CBAJ_G0027088.1 mouse_genomes_project 3 95166517 95180689 + MGP_CBAJ_P0061255 Mex3a protein_coding protein_coding MGP_CBAJ_T0098373.1 MGP_CBAJ_G0036639.1 mouse_genomes_project 3 114908626 114910779 - Gm43330 sense_intronic sense_intronic MGP_CBAJ_T0007665.1 MGP_CBAJ_G0006263.1 mouse_genomes_project 3 163613343 163664415 + Gm42649 lincRNA lincRNA MGP_CBAJ_T0059678.1 MGP_CBAJ_G0026757.1 mouse_genomes_project 3 7947439 7961511 - MGP_CBAJ_P0059678 Gm38303 protein_coding nonsense_mediated_decay MGP_CBAJ_T0001106.1 MGP_CBAJ_G0001035.1 mouse_genomes_project 3 34804166 34807038 + TEC TEC MGP_CBAJ_T0007412.1 MGP_CBAJ_G0006068.1 mouse_genomes_project 3 38644206 38675243 - Gm43821 lincRNA lincRNA MGP_CBAJ_T0011402.1 MGP_CBAJ_G0009540.1 mouse_genomes_project 3 11892771 11893066 + Gm25981 misc_RNA misc_RNA MGP_CBAJ_T0061970.1 MGP_CBAJ_G0027256.1 mouse_genomes_project 3 103098915 103108466 - MGP_CBAJ_P0061970 Mllt11 protein_coding protein_coding MGP_CBAJ_T0061971.1 MGP_CBAJ_G0027256.1 mouse_genomes_project 3 103099809 103111936 - MGP_CBAJ_P0061971 Mllt11 protein_coding protein_coding MGP_CBAJ_T0061972.1 MGP_CBAJ_G0027256.1 mouse_genomes_project 3 103099819 103111939 - MGP_CBAJ_P0061972 Mllt11 protein_coding protein_coding MGP_CBAJ_T0061973.1 MGP_CBAJ_G0027256.1 mouse_genomes_project 3 103107874 103110240 - Mllt11 protein_coding processed_transcript MGP_CBAJ_T0061977.1 MGP_CBAJ_G0027256.1 mouse_genomes_project 3 103108834 103110166 - Mllt11 protein_coding processed_transcript MGP_CBAJ_T0014174.1 MGP_CBAJ_G0012286.1 mouse_genomes_project 3 160619739 160620131 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062927.1 MGP_CBAJ_G0027476.1 mouse_genomes_project 3 123729935 123756064 - MGP_CBAJ_P0062927 Rnpc3 protein_coding protein_coding MGP_CBAJ_T0062928.1 MGP_CBAJ_G0027476.1 mouse_genomes_project 3 123730234 123755948 - MGP_CBAJ_P0062928 Rnpc3 protein_coding protein_coding MGP_CBAJ_T0062929.1 MGP_CBAJ_G0027476.1 mouse_genomes_project 3 123730241 123756064 - MGP_CBAJ_P0062929 Rnpc3 protein_coding protein_coding MGP_CBAJ_T0062930.1 MGP_CBAJ_G0027476.1 mouse_genomes_project 3 123731113 123756064 - MGP_CBAJ_P0062930 Rnpc3 protein_coding protein_coding MGP_CBAJ_T0062931.1 MGP_CBAJ_G0027476.1 mouse_genomes_project 3 123735910 123741404 - Rnpc3 protein_coding processed_transcript MGP_CBAJ_T0062932.1 MGP_CBAJ_G0027476.1 mouse_genomes_project 3 123742516 123747880 - Rnpc3 protein_coding processed_transcript MGP_CBAJ_T0062933.1 MGP_CBAJ_G0027476.1 mouse_genomes_project 3 123742765 123747231 - Rnpc3 protein_coding processed_transcript MGP_CBAJ_T0062934.1 MGP_CBAJ_G0027476.1 mouse_genomes_project 3 123752992 123755994 - Rnpc3 protein_coding retained_intron MGP_CBAJ_T0064002.1 MGP_CBAJ_G0027674.1 mouse_genomes_project 3 168838153 168896445 - MGP_CBAJ_P0064002 Msh4 protein_coding protein_coding MGP_CBAJ_T0064003.1 MGP_CBAJ_G0027674.1 mouse_genomes_project 3 168838273 168863468 - Msh4 protein_coding retained_intron MGP_CBAJ_T0064004.1 MGP_CBAJ_G0027674.1 mouse_genomes_project 3 168838273 168868416 - Msh4 protein_coding retained_intron MGP_CBAJ_T0064005.1 MGP_CBAJ_G0027674.1 mouse_genomes_project 3 168838273 168850645 - Msh4 protein_coding processed_transcript MGP_CBAJ_T0064006.1 MGP_CBAJ_G0027674.1 mouse_genomes_project 3 168838273 168868416 - Msh4 protein_coding retained_intron MGP_CBAJ_T0064007.1 MGP_CBAJ_G0027674.1 mouse_genomes_project 3 168838273 168850671 - Msh4 protein_coding retained_intron MGP_CBAJ_T0064008.1 MGP_CBAJ_G0027674.1 mouse_genomes_project 3 168838273 168895037 - MGP_CBAJ_P0064008 Msh4 protein_coding protein_coding MGP_CBAJ_T0064009.1 MGP_CBAJ_G0027674.1 mouse_genomes_project 3 168838277 168895197 - MGP_CBAJ_P0064009 Msh4 protein_coding protein_coding MGP_CBAJ_T0014075.1 MGP_CBAJ_G0012187.1 mouse_genomes_project 3 125098509 125099177 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0063775.1 MGP_CBAJ_G0027636.1 mouse_genomes_project 3 159463771 159496710 + MGP_CBAJ_P0063775 Znhit6 protein_coding protein_coding MGP_CBAJ_T0063776.1 MGP_CBAJ_G0027636.1 mouse_genomes_project 3 159463798 159497392 + MGP_CBAJ_P0063776 Znhit6 protein_coding protein_coding MGP_CBAJ_T0063777.1 MGP_CBAJ_G0027636.1 mouse_genomes_project 3 159463813 159466097 + MGP_CBAJ_P0063777 Znhit6 protein_coding protein_coding MGP_CBAJ_T0063778.1 MGP_CBAJ_G0027636.1 mouse_genomes_project 3 159463824 159487259 + MGP_CBAJ_P0063778 Znhit6 protein_coding protein_coding MGP_CBAJ_T0063779.1 MGP_CBAJ_G0027636.1 mouse_genomes_project 3 159463840 159470278 + MGP_CBAJ_P0063779 Znhit6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063780.1 MGP_CBAJ_G0027636.1 mouse_genomes_project 3 159463902 159483682 + MGP_CBAJ_P0063780 Znhit6 protein_coding protein_coding MGP_CBAJ_T0063781.1 MGP_CBAJ_G0027636.1 mouse_genomes_project 3 159488461 159496609 + Znhit6 protein_coding retained_intron MGP_CBAJ_T0013759.1 MGP_CBAJ_G0011871.1 mouse_genomes_project 3 17122786 17123986 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014139.1 MGP_CBAJ_G0012251.1 mouse_genomes_project 3 148517377 148517924 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099170.1 MGP_CBAJ_G0037425.1 mouse_genomes_project 3 63270512 63270618 - Gm24382 snRNA snRNA MGP_CBAJ_T0062215.1 MGP_CBAJ_G0027309.1 mouse_genomes_project 3 104866177 104868658 - MGP_CBAJ_P0062215 Nudt17 protein_coding protein_coding MGP_CBAJ_T0062216.1 MGP_CBAJ_G0027309.1 mouse_genomes_project 3 104866178 104867354 - Nudt17 protein_coding retained_intron MGP_CBAJ_T0062217.1 MGP_CBAJ_G0027309.1 mouse_genomes_project 3 104866179 104868673 - MGP_CBAJ_P0062217 Nudt17 protein_coding protein_coding MGP_CBAJ_T0062218.1 MGP_CBAJ_G0027309.1 mouse_genomes_project 3 104866278 104868650 - MGP_CBAJ_P0062218 Nudt17 protein_coding protein_coding MGP_CBAJ_T0001362.1 MGP_CBAJ_G0001288.1 mouse_genomes_project 3 173633872 173636597 + TEC TEC MGP_CBAJ_T0007500.1 MGP_CBAJ_G0006135.1 mouse_genomes_project 3 94718613 94724104 - AI849053 lincRNA lincRNA MGP_CBAJ_T0063726.1 MGP_CBAJ_G0027626.1 mouse_genomes_project 3 158064525 158214301 - MGP_CBAJ_P0063726 Hs2st1 protein_coding protein_coding MGP_CBAJ_T0063727.1 MGP_CBAJ_G0027626.1 mouse_genomes_project 3 158088782 158214001 - MGP_CBAJ_P0063727 Hs2st1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063728.1 MGP_CBAJ_G0027626.1 mouse_genomes_project 3 158211957 158214278 - Hs2st1 protein_coding retained_intron MGP_CBAJ_T0062294.1 MGP_CBAJ_G0027326.1 mouse_genomes_project 3 106328160 106419501 + Notch2 protein_coding retained_intron MGP_CBAJ_T0062295.1 MGP_CBAJ_G0027326.1 mouse_genomes_project 3 106328171 106475418 + MGP_CBAJ_P0062295 Notch2 protein_coding protein_coding MGP_CBAJ_T0100466.1 MGP_CBAJ_G0038721.1 mouse_genomes_project 3 93984868 93984988 - Gm25167 snoRNA snoRNA MGP_CBAJ_T0013799.1 MGP_CBAJ_G0011911.1 mouse_genomes_project 3 36593448 36594404 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001157.1 MGP_CBAJ_G0001085.1 mouse_genomes_project 3 53899298 53904260 - TEC TEC MGP_CBAJ_T0013783.1 MGP_CBAJ_G0011895.1 mouse_genomes_project 3 27724405 27724649 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100453.1 MGP_CBAJ_G0038708.1 mouse_genomes_project 3 71379428 71379560 - Gm25919 snoRNA snoRNA MGP_CBAJ_T0007482.1 MGP_CBAJ_G0006118.1 mouse_genomes_project 3 85012037 85019022 + 4930589L23Rik lincRNA lincRNA MGP_CBAJ_T0098369.1 MGP_CBAJ_G0036635.1 mouse_genomes_project 3 114015516 114016453 - Gm43846 sense_intronic sense_intronic MGP_CBAJ_T0007614.1 MGP_CBAJ_G0006220.1 mouse_genomes_project 3 146866683 146889188 - 4930539C22Rik lincRNA lincRNA MGP_CBAJ_T0004230.1 MGP_CBAJ_G0003709.1 mouse_genomes_project 3 107719903 107727542 - Gm43120 antisense antisense MGP_CBAJ_T0100503.1 MGP_CBAJ_G0038758.1 mouse_genomes_project 3 168901888 168901969 - Gm24494 snoRNA snoRNA MGP_CBAJ_T0060365.1 MGP_CBAJ_G0026889.1 mouse_genomes_project 3 53514293 53577639 + Naa15 protein_coding processed_transcript MGP_CBAJ_T0060366.1 MGP_CBAJ_G0026889.1 mouse_genomes_project 3 53514320 53583426 + MGP_CBAJ_P0060366 Naa15 protein_coding protein_coding MGP_CBAJ_T0060367.1 MGP_CBAJ_G0026889.1 mouse_genomes_project 3 53514611 53548937 + MGP_CBAJ_P0060367 Naa15 protein_coding protein_coding MGP_CBAJ_T0060368.1 MGP_CBAJ_G0026889.1 mouse_genomes_project 3 53545689 53549965 + Naa15 protein_coding retained_intron MGP_CBAJ_T0060369.1 MGP_CBAJ_G0026889.1 mouse_genomes_project 3 53547481 53554630 + MGP_CBAJ_P0060369 Naa15 protein_coding protein_coding MGP_CBAJ_T0060370.1 MGP_CBAJ_G0026889.1 mouse_genomes_project 3 53565819 53569391 + Naa15 protein_coding retained_intron MGP_CBAJ_T0060371.1 MGP_CBAJ_G0026889.1 mouse_genomes_project 3 53566808 53569127 + Naa15 protein_coding retained_intron MGP_CBAJ_T0060372.1 MGP_CBAJ_G0026889.1 mouse_genomes_project 3 53575214 53578287 + Naa15 protein_coding retained_intron MGP_CBAJ_T0061948.1 MGP_CBAJ_G0027253.1 mouse_genomes_project 3 103006851 103009694 - MGP_CBAJ_P0061948 Tnfaip8l2 protein_coding protein_coding MGP_CBAJ_T0062603.1 MGP_CBAJ_G0027396.1 mouse_genomes_project 3 114821658 114837813 + MGP_CBAJ_P0062603 Fam212b protein_coding protein_coding MGP_CBAJ_T0062604.1 MGP_CBAJ_G0027396.1 mouse_genomes_project 3 114822521 114835119 + MGP_CBAJ_P0062604 Fam212b protein_coding protein_coding MGP_CBAJ_T0013942.1 MGP_CBAJ_G0012054.1 mouse_genomes_project 3 83219604 83221013 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0060528.1 MGP_CBAJ_G0026921.1 mouse_genomes_project 3 60255056 60387365 - MGP_CBAJ_P0060528 Wwtr1 protein_coding protein_coding MGP_CBAJ_T0060529.1 MGP_CBAJ_G0026921.1 mouse_genomes_project 3 60255189 60387447 - MGP_CBAJ_P0060529 Wwtr1 protein_coding protein_coding MGP_CBAJ_T0013934.1 MGP_CBAJ_G0012046.1 mouse_genomes_project 3 79068090 79068556 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001247.1 MGP_CBAJ_G0001174.1 mouse_genomes_project 3 117806926 117812163 + TEC TEC MGP_CBAJ_T0063166.1 MGP_CBAJ_G0027522.1 mouse_genomes_project 3 134243064 134271482 - MGP_CBAJ_P0063166 Myoz2 protein_coding protein_coding MGP_CBAJ_T0063167.1 MGP_CBAJ_G0027522.1 mouse_genomes_project 3 134243375 134271311 - MGP_CBAJ_P0063167 Myoz2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063168.1 MGP_CBAJ_G0027522.1 mouse_genomes_project 3 134243460 134271471 - Myoz2 protein_coding processed_transcript MGP_CBAJ_T0063169.1 MGP_CBAJ_G0027522.1 mouse_genomes_project 3 134250737 134271430 - Myoz2 protein_coding processed_transcript MGP_CBAJ_T0063170.1 MGP_CBAJ_G0027522.1 mouse_genomes_project 3 134260597 134271419 - Myoz2 protein_coding retained_intron MGP_CBAJ_T0059681.1 MGP_CBAJ_G0026759.1 mouse_genomes_project 3 7965933 7986681 - MGP_CBAJ_P0059681 Zfand1 protein_coding protein_coding MGP_CBAJ_T0059682.1 MGP_CBAJ_G0026759.1 mouse_genomes_project 3 7965935 7970820 - Zfand1 protein_coding retained_intron MGP_CBAJ_T0059683.1 MGP_CBAJ_G0026759.1 mouse_genomes_project 3 7966599 7986677 - MGP_CBAJ_P0059683 Zfand1 protein_coding protein_coding MGP_CBAJ_T0059684.1 MGP_CBAJ_G0026759.1 mouse_genomes_project 3 7966662 7986681 - MGP_CBAJ_P0059684 Zfand1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059685.1 MGP_CBAJ_G0026759.1 mouse_genomes_project 3 7966705 7981532 - MGP_CBAJ_P0059685 Zfand1 protein_coding protein_coding MGP_CBAJ_T0059686.1 MGP_CBAJ_G0026759.1 mouse_genomes_project 3 7970750 7972515 - Zfand1 protein_coding retained_intron MGP_CBAJ_T0059687.1 MGP_CBAJ_G0026759.1 mouse_genomes_project 3 7972024 7986678 - Zfand1 protein_coding processed_transcript MGP_CBAJ_T0059688.1 MGP_CBAJ_G0026759.1 mouse_genomes_project 3 7985854 7986680 - Zfand1 protein_coding processed_transcript MGP_CBAJ_T0099215.1 MGP_CBAJ_G0037470.1 mouse_genomes_project 3 133637105 133637261 + Gm25153 snRNA snRNA MGP_CBAJ_T0063035.1 MGP_CBAJ_G0027497.1 mouse_genomes_project 3 127484991 127502441 + MGP_CBAJ_P0063035 4930455H04Rik protein_coding protein_coding MGP_CBAJ_T0007624.1 MGP_CBAJ_G0006230.1 mouse_genomes_project 3 151657900 151673153 - 4930425O10Rik lincRNA lincRNA MGP_CBAJ_T0062354.1 MGP_CBAJ_G0027345.1 mouse_genomes_project 3 109331859 109420579 + MGP_CBAJ_P0062354 Vtcn1 protein_coding protein_coding MGP_CBAJ_T0001245.1 MGP_CBAJ_G0001172.1 mouse_genomes_project 3 117327244 117327930 + TEC TEC MGP_CBAJ_T0004320.1 MGP_CBAJ_G0003766.1 mouse_genomes_project 3 167781184 167782342 + Gm16213 antisense antisense MGP_CBAJ_T0007585.1 MGP_CBAJ_G0006196.1 mouse_genomes_project 3 133814332 133822228 - Gm43568 lincRNA lincRNA MGP_CBAJ_T0007586.1 MGP_CBAJ_G0006196.1 mouse_genomes_project 3 133819277 133821723 - Gm43568 lincRNA lincRNA MGP_CBAJ_T0007587.1 MGP_CBAJ_G0006196.1 mouse_genomes_project 3 133820693 133821945 - Gm43568 lincRNA lincRNA MGP_CBAJ_T0061127.1 MGP_CBAJ_G0027064.1 mouse_genomes_project 3 94381960 94385849 + MGP_CBAJ_P0061127 Mrpl24 protein_coding protein_coding MGP_CBAJ_T0061128.1 MGP_CBAJ_G0027064.1 mouse_genomes_project 3 94381960 94385839 + MGP_CBAJ_P0061128 Mrpl24 protein_coding protein_coding MGP_CBAJ_T0061129.1 MGP_CBAJ_G0027064.1 mouse_genomes_project 3 94381990 94384229 + MGP_CBAJ_P0061129 Mrpl24 protein_coding protein_coding MGP_CBAJ_T0061130.1 MGP_CBAJ_G0027064.1 mouse_genomes_project 3 94382011 94382976 + Mrpl24 protein_coding retained_intron MGP_CBAJ_T0061131.1 MGP_CBAJ_G0027064.1 mouse_genomes_project 3 94382017 94385849 + MGP_CBAJ_P0061131 Mrpl24 protein_coding protein_coding MGP_CBAJ_T0061132.1 MGP_CBAJ_G0027064.1 mouse_genomes_project 3 94383824 94385849 + MGP_CBAJ_P0061132 Mrpl24 protein_coding protein_coding MGP_CBAJ_T0004137.1 MGP_CBAJ_G0003642.1 mouse_genomes_project 3 32577699 32580338 + Gm37640 antisense antisense MGP_CBAJ_T0013927.1 MGP_CBAJ_G0012039.1 mouse_genomes_project 3 76258173 76259138 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014013.1 MGP_CBAJ_G0012125.1 mouse_genomes_project 3 106584370 106584859 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001187.1 MGP_CBAJ_G0001114.1 mouse_genomes_project 3 60519930 60521227 - TEC TEC MGP_CBAJ_T0007539.1 MGP_CBAJ_G0006161.1 mouse_genomes_project 3 110339244 110347070 + Gm43135 lincRNA lincRNA MGP_CBAJ_T0004151.1 MGP_CBAJ_G0003651.1 mouse_genomes_project 3 37816100 37830563 - Fgf2os antisense antisense MGP_CBAJ_T0059865.1 MGP_CBAJ_G0026805.1 mouse_genomes_project 3 27415477 27424982 + Pld1 protein_coding processed_transcript MGP_CBAJ_T0059866.1 MGP_CBAJ_G0026805.1 mouse_genomes_project 3 27415478 27498362 + MGP_CBAJ_P0059866 Pld1 protein_coding protein_coding MGP_CBAJ_T0059867.1 MGP_CBAJ_G0026805.1 mouse_genomes_project 3 27489134 27599794 + MGP_CBAJ_P0059867 Pld1 protein_coding protein_coding MGP_CBAJ_T0059868.1 MGP_CBAJ_G0026805.1 mouse_genomes_project 3 27500933 27601418 + MGP_CBAJ_P0059868 Pld1 protein_coding protein_coding MGP_CBAJ_T0059869.1 MGP_CBAJ_G0026805.1 mouse_genomes_project 3 27510876 27517747 + Pld1 protein_coding processed_transcript MGP_CBAJ_T0059870.1 MGP_CBAJ_G0026805.1 mouse_genomes_project 3 27535772 27550514 + Pld1 protein_coding retained_intron MGP_CBAJ_T0059871.1 MGP_CBAJ_G0026805.1 mouse_genomes_project 3 27543009 27546322 + Pld1 protein_coding retained_intron MGP_CBAJ_T0059872.1 MGP_CBAJ_G0026805.1 mouse_genomes_project 3 27576039 27598851 + MGP_CBAJ_P0059872 Pld1 protein_coding protein_coding MGP_CBAJ_T0007532.1 MGP_CBAJ_G0006154.1 mouse_genomes_project 3 106191301 106200138 - Gm15999 lincRNA lincRNA MGP_CBAJ_T0063098.1 MGP_CBAJ_G0027509.1 mouse_genomes_project 3 132763237 132779415 + MGP_CBAJ_P0063098 F3 protein_coding protein_coding MGP_CBAJ_T0063099.1 MGP_CBAJ_G0027509.1 mouse_genomes_project 3 132763270 132769239 + F3 protein_coding processed_transcript MGP_CBAJ_T0063100.1 MGP_CBAJ_G0027509.1 mouse_genomes_project 3 132769026 132771869 + F3 protein_coding retained_intron MGP_CBAJ_T0013911.1 MGP_CBAJ_G0012023.1 mouse_genomes_project 3 72243922 72244503 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010402.1 MGP_CBAJ_G0008540.1 mouse_genomes_project 3 95993579 95993662 - Mir92b miRNA miRNA MGP_CBAJ_T0061863.1 MGP_CBAJ_G0027240.1 mouse_genomes_project 3 102622154 102668679 + MGP_CBAJ_P0061863 Pogz protein_coding protein_coding MGP_CBAJ_T0061864.1 MGP_CBAJ_G0027240.1 mouse_genomes_project 3 102622284 102647928 + Pogz protein_coding processed_transcript MGP_CBAJ_T0061865.1 MGP_CBAJ_G0027240.1 mouse_genomes_project 3 102622300 102652851 + Pogz protein_coding retained_intron MGP_CBAJ_T0061866.1 MGP_CBAJ_G0027240.1 mouse_genomes_project 3 102622300 102668677 + MGP_CBAJ_P0061866 Pogz protein_coding protein_coding MGP_CBAJ_T0061867.1 MGP_CBAJ_G0027240.1 mouse_genomes_project 3 102622300 102666685 + MGP_CBAJ_P0061867 Pogz protein_coding protein_coding MGP_CBAJ_T0061868.1 MGP_CBAJ_G0027240.1 mouse_genomes_project 3 102622300 102667228 + MGP_CBAJ_P0061868 Pogz protein_coding protein_coding MGP_CBAJ_T0061869.1 MGP_CBAJ_G0027240.1 mouse_genomes_project 3 102650062 102650885 + Pogz protein_coding retained_intron MGP_CBAJ_T0061870.1 MGP_CBAJ_G0027240.1 mouse_genomes_project 3 102650853 102658654 + MGP_CBAJ_P0061870 Pogz protein_coding nonsense_mediated_decay MGP_CBAJ_T0061871.1 MGP_CBAJ_G0027240.1 mouse_genomes_project 3 102657663 102660103 + Pogz protein_coding processed_transcript MGP_CBAJ_T0061872.1 MGP_CBAJ_G0027240.1 mouse_genomes_project 3 102664007 102665319 + Pogz protein_coding retained_intron MGP_CBAJ_T0001299.1 MGP_CBAJ_G0001226.1 mouse_genomes_project 3 139610136 139613545 - TEC TEC MGP_CBAJ_T0004266.1 MGP_CBAJ_G0003726.1 mouse_genomes_project 3 118638211 118640282 + Gm43221 antisense antisense MGP_CBAJ_T0100468.1 MGP_CBAJ_G0038723.1 mouse_genomes_project 3 95788624 95788754 - Gm24403 snoRNA snoRNA MGP_CBAJ_T0060606.1 MGP_CBAJ_G0026942.1 mouse_genomes_project 3 63014923 63027362 + MGP_CBAJ_P0060606 protein_coding protein_coding MGP_CBAJ_T0007373.1 MGP_CBAJ_G0006033.1 mouse_genomes_project 3 17003540 17015765 - 4930433B08Rik lincRNA lincRNA MGP_CBAJ_T0061772.1 MGP_CBAJ_G0027207.1 mouse_genomes_project 3 100138128 100139729 - MGP_CBAJ_P0061772 Lce1k protein_coding protein_coding MGP_CBAJ_T0001145.1 MGP_CBAJ_G0001074.1 mouse_genomes_project 3 52994693 52995986 - TEC TEC MGP_CBAJ_T0061987.1 MGP_CBAJ_G0027260.1 mouse_genomes_project 3 103141835 103174348 - MGP_CBAJ_P0061987 Prune protein_coding protein_coding MGP_CBAJ_T0061988.1 MGP_CBAJ_G0027260.1 mouse_genomes_project 3 103153109 103156896 - Prune protein_coding retained_intron MGP_CBAJ_T0013761.1 MGP_CBAJ_G0011873.1 mouse_genomes_project 3 18229876 18230092 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099185.1 MGP_CBAJ_G0037440.1 mouse_genomes_project 3 92612709 92612878 + Gm23850 snRNA snRNA MGP_CBAJ_T0063285.1 MGP_CBAJ_G0027539.1 mouse_genomes_project 3 139392888 139395384 + MGP_CBAJ_P0063285 Neurog2 protein_coding protein_coding MGP_CBAJ_T0062577.1 MGP_CBAJ_G0027390.1 mouse_genomes_project 3 113909069 113911524 + St7l protein_coding retained_intron MGP_CBAJ_T0062578.1 MGP_CBAJ_G0027390.1 mouse_genomes_project 3 113909567 113984711 + MGP_CBAJ_P0062578 St7l protein_coding protein_coding MGP_CBAJ_T0062579.1 MGP_CBAJ_G0027390.1 mouse_genomes_project 3 113909567 113987912 + MGP_CBAJ_P0062579 St7l protein_coding protein_coding MGP_CBAJ_T0062580.1 MGP_CBAJ_G0027390.1 mouse_genomes_project 3 113910131 113985628 + MGP_CBAJ_P0062580 St7l protein_coding protein_coding MGP_CBAJ_T0062581.1 MGP_CBAJ_G0027390.1 mouse_genomes_project 3 113910135 113985752 + MGP_CBAJ_P0062581 St7l protein_coding nonsense_mediated_decay MGP_CBAJ_T0062582.1 MGP_CBAJ_G0027390.1 mouse_genomes_project 3 113910144 113938072 + MGP_CBAJ_P0062582 St7l protein_coding protein_coding MGP_CBAJ_T0062583.1 MGP_CBAJ_G0027390.1 mouse_genomes_project 3 113910177 113938004 + St7l protein_coding processed_transcript MGP_CBAJ_T0062584.1 MGP_CBAJ_G0027390.1 mouse_genomes_project 3 113918766 113977400 + MGP_CBAJ_P0062584 St7l protein_coding protein_coding MGP_CBAJ_T0062585.1 MGP_CBAJ_G0027390.1 mouse_genomes_project 3 113918789 113931269 + St7l protein_coding processed_transcript MGP_CBAJ_T0062586.1 MGP_CBAJ_G0027390.1 mouse_genomes_project 3 113931172 113977388 + MGP_CBAJ_P0062586 St7l protein_coding nonsense_mediated_decay MGP_CBAJ_T0062587.1 MGP_CBAJ_G0027390.1 mouse_genomes_project 3 113937589 113944266 + St7l protein_coding retained_intron MGP_CBAJ_T0007419.1 MGP_CBAJ_G0006073.1 mouse_genomes_project 3 41314587 41335849 - 1700017G19Rik lincRNA lincRNA MGP_CBAJ_T0007420.1 MGP_CBAJ_G0006073.1 mouse_genomes_project 3 41318150 41319497 - 1700017G19Rik lincRNA lincRNA MGP_CBAJ_T0100455.1 MGP_CBAJ_G0038710.1 mouse_genomes_project 3 74348476 74348604 - Gm23477 snoRNA snoRNA MGP_CBAJ_T0064088.1 MGP_CBAJ_G0027688.1 mouse_genomes_project 3 173304025 173335369 - MGP_CBAJ_P0064088 Cth protein_coding protein_coding MGP_CBAJ_T0064089.1 MGP_CBAJ_G0027688.1 mouse_genomes_project 3 173304200 173307489 - Cth protein_coding processed_transcript MGP_CBAJ_T0064090.1 MGP_CBAJ_G0027688.1 mouse_genomes_project 3 173307078 173315465 - Cth protein_coding retained_intron MGP_CBAJ_T0064091.1 MGP_CBAJ_G0027688.1 mouse_genomes_project 3 173329968 173335343 - Cth protein_coding retained_intron MGP_CBAJ_T0059987.1 MGP_CBAJ_G0026827.1 mouse_genomes_project 3 32264382 32303500 - MGP_CBAJ_P0059987 Zmat3 protein_coding protein_coding MGP_CBAJ_T0059988.1 MGP_CBAJ_G0026827.1 mouse_genomes_project 3 32264386 32303442 - MGP_CBAJ_P0059988 Zmat3 protein_coding protein_coding MGP_CBAJ_T0059989.1 MGP_CBAJ_G0026827.1 mouse_genomes_project 3 32298887 32303282 - MGP_CBAJ_P0059989 Zmat3 protein_coding protein_coding MGP_CBAJ_T0059990.1 MGP_CBAJ_G0026827.1 mouse_genomes_project 3 32300007 32303842 - Zmat3 protein_coding retained_intron MGP_CBAJ_T0013859.1 MGP_CBAJ_G0011971.1 mouse_genomes_project 3 55648269 55649007 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099221.1 MGP_CBAJ_G0037476.1 mouse_genomes_project 3 145225870 145225977 + Gm23196 snRNA snRNA MGP_CBAJ_T0063984.1 MGP_CBAJ_G0027670.1 mouse_genomes_project 3 167560491 167648525 + MGP_CBAJ_P0063984 Pigk protein_coding protein_coding MGP_CBAJ_T0063985.1 MGP_CBAJ_G0027670.1 mouse_genomes_project 3 167560497 167591136 + Pigk protein_coding retained_intron MGP_CBAJ_T0063986.1 MGP_CBAJ_G0027670.1 mouse_genomes_project 3 167560504 167638288 + MGP_CBAJ_P0063986 Pigk protein_coding protein_coding MGP_CBAJ_T0063987.1 MGP_CBAJ_G0027670.1 mouse_genomes_project 3 167560504 167701512 + MGP_CBAJ_P0063987 Pigk protein_coding nonsense_mediated_decay MGP_CBAJ_T0063988.1 MGP_CBAJ_G0027670.1 mouse_genomes_project 3 167560511 167843235 + MGP_CBAJ_P0063988 Pigk protein_coding nonsense_mediated_decay MGP_CBAJ_T0063989.1 MGP_CBAJ_G0027670.1 mouse_genomes_project 3 167560514 167638019 + MGP_CBAJ_P0063989 Pigk protein_coding nonsense_mediated_decay MGP_CBAJ_T0063990.1 MGP_CBAJ_G0027670.1 mouse_genomes_project 3 167588011 167590168 + Pigk protein_coding processed_transcript MGP_CBAJ_T0063991.1 MGP_CBAJ_G0027670.1 mouse_genomes_project 3 167588230 167638214 + MGP_CBAJ_P0063991 Pigk protein_coding nonsense_mediated_decay MGP_CBAJ_T0063992.1 MGP_CBAJ_G0027670.1 mouse_genomes_project 3 167614934 167618115 + Pigk protein_coding processed_transcript MGP_CBAJ_T0063572.1 MGP_CBAJ_G0027594.1 mouse_genomes_project 3 150716596 150767344 + MGP_CBAJ_P0063572 Dnajb14 protein_coding protein_coding MGP_CBAJ_T0063573.1 MGP_CBAJ_G0027594.1 mouse_genomes_project 3 150716808 150746474 + Dnajb14 protein_coding retained_intron MGP_CBAJ_T0063574.1 MGP_CBAJ_G0027594.1 mouse_genomes_project 3 150717102 150752686 + MGP_CBAJ_P0063574 Dnajb14 protein_coding protein_coding MGP_CBAJ_T0063575.1 MGP_CBAJ_G0027594.1 mouse_genomes_project 3 150755654 150760187 + Dnajb14 protein_coding retained_intron MGP_CBAJ_T0011405.1 MGP_CBAJ_G0009543.1 mouse_genomes_project 3 23849280 23849546 + Gm24062 misc_RNA misc_RNA MGP_CBAJ_T0062407.1 MGP_CBAJ_G0027359.1 mouse_genomes_project 3 111484338 111518290 + MGP_CBAJ_P0062407 Tspan2 protein_coding protein_coding MGP_CBAJ_T0062408.1 MGP_CBAJ_G0027359.1 mouse_genomes_project 3 111484556 111518553 + MGP_CBAJ_P0062408 Tspan2 protein_coding protein_coding MGP_CBAJ_T0062409.1 MGP_CBAJ_G0027359.1 mouse_genomes_project 3 111508656 111561359 + MGP_CBAJ_P0062409 Tspan2 protein_coding protein_coding MGP_CBAJ_T0062245.1 MGP_CBAJ_G0027316.1 mouse_genomes_project 3 105228279 105246706 + MGP_CBAJ_P0062245 Gja5 protein_coding protein_coding MGP_CBAJ_T0062246.1 MGP_CBAJ_G0027316.1 mouse_genomes_project 3 105228279 105249470 + MGP_CBAJ_P0062246 Gja5 protein_coding protein_coding MGP_CBAJ_T0001149.1 MGP_CBAJ_G0001078.1 mouse_genomes_project 3 53521597 53521708 + TEC TEC MGP_CBAJ_T0060141.1 MGP_CBAJ_G0026853.1 mouse_genomes_project 3 36993126 37000361 - MGP_CBAJ_P0060141 Ccna2 protein_coding protein_coding MGP_CBAJ_T0060142.1 MGP_CBAJ_G0026853.1 mouse_genomes_project 3 36993906 36995123 - Ccna2 protein_coding processed_transcript MGP_CBAJ_T0060143.1 MGP_CBAJ_G0026853.1 mouse_genomes_project 3 36994250 36999762 - MGP_CBAJ_P0060143 Ccna2 protein_coding protein_coding MGP_CBAJ_T0060144.1 MGP_CBAJ_G0026853.1 mouse_genomes_project 3 36994250 37000138 - MGP_CBAJ_P0060144 Ccna2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060145.1 MGP_CBAJ_G0026853.1 mouse_genomes_project 3 36998657 37000175 - Ccna2 protein_coding retained_intron MGP_CBAJ_T0014125.1 MGP_CBAJ_G0012237.1 mouse_genomes_project 3 145332980 145333409 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0062779.1 MGP_CBAJ_G0027444.1 mouse_genomes_project 3 117647750 117654345 - MGP_CBAJ_P0062779 Gpr61 protein_coding protein_coding MGP_CBAJ_T0062780.1 MGP_CBAJ_G0027444.1 mouse_genomes_project 3 117648086 117654345 - MGP_CBAJ_P0062780 Gpr61 protein_coding nonsense_mediated_decay MGP_CBAJ_T0013862.1 MGP_CBAJ_G0011974.1 mouse_genomes_project 3 56443724 56444132 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061637.1 MGP_CBAJ_G0027149.1 mouse_genomes_project 3 97193045 97203008 + MGP_CBAJ_P0061637 Crtc2 protein_coding protein_coding MGP_CBAJ_T0061638.1 MGP_CBAJ_G0027149.1 mouse_genomes_project 3 97193178 97203003 + Crtc2 protein_coding retained_intron MGP_CBAJ_T0061639.1 MGP_CBAJ_G0027149.1 mouse_genomes_project 3 97193178 97203003 + Crtc2 protein_coding retained_intron MGP_CBAJ_T0061640.1 MGP_CBAJ_G0027149.1 mouse_genomes_project 3 97193206 97197516 + Crtc2 protein_coding retained_intron MGP_CBAJ_T0061641.1 MGP_CBAJ_G0027149.1 mouse_genomes_project 3 97193223 97203003 + Crtc2 protein_coding processed_transcript MGP_CBAJ_T0061642.1 MGP_CBAJ_G0027149.1 mouse_genomes_project 3 97196177 97203003 + MGP_CBAJ_P0061642 Crtc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061643.1 MGP_CBAJ_G0027149.1 mouse_genomes_project 3 97196933 97198375 + Crtc2 protein_coding retained_intron MGP_CBAJ_T0061644.1 MGP_CBAJ_G0027149.1 mouse_genomes_project 3 97197847 97199204 + Crtc2 protein_coding retained_intron MGP_CBAJ_T0059612.1 MGP_CBAJ_G0026735.1 mouse_genomes_project 3 256537 426287 + MGP_CBAJ_P0059612 Hnf4g protein_coding protein_coding MGP_CBAJ_T0059613.1 MGP_CBAJ_G0026735.1 mouse_genomes_project 3 401309 426495 + MGP_CBAJ_P0059613 Hnf4g protein_coding protein_coding MGP_CBAJ_T0099217.1 MGP_CBAJ_G0037472.1 mouse_genomes_project 3 135738074 135738184 + Gm22575 snRNA snRNA MGP_CBAJ_T0062321.1 MGP_CBAJ_G0027337.1 mouse_genomes_project 3 107315316 107334124 - MGP_CBAJ_P0062321 Hao2 protein_coding protein_coding MGP_CBAJ_T0062473.1 MGP_CBAJ_G0027369.1 mouse_genomes_project 3 112139475 112236903 + MGP_CBAJ_P0062473 Trim33 protein_coding protein_coding MGP_CBAJ_T0062474.1 MGP_CBAJ_G0027369.1 mouse_genomes_project 3 112139966 112236894 + MGP_CBAJ_P0062474 Trim33 protein_coding protein_coding MGP_CBAJ_T0062475.1 MGP_CBAJ_G0027369.1 mouse_genomes_project 3 112187949 112205642 + MGP_CBAJ_P0062475 Trim33 protein_coding protein_coding MGP_CBAJ_T0062476.1 MGP_CBAJ_G0027369.1 mouse_genomes_project 3 112197953 112202915 + Trim33 protein_coding retained_intron MGP_CBAJ_T0062477.1 MGP_CBAJ_G0027369.1 mouse_genomes_project 3 112202571 112203924 + Trim33 protein_coding retained_intron MGP_CBAJ_T0062478.1 MGP_CBAJ_G0027369.1 mouse_genomes_project 3 112202663 112235523 + MGP_CBAJ_P0062478 Trim33 protein_coding nonsense_mediated_decay MGP_CBAJ_T0001334.1 MGP_CBAJ_G0001260.1 mouse_genomes_project 3 162689478 162690348 + TEC TEC MGP_CBAJ_T0014170.1 MGP_CBAJ_G0012282.1 mouse_genomes_project 3 158465972 158467647 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063171.1 MGP_CBAJ_G0027523.1 mouse_genomes_project 3 134314747 134350234 - MGP_CBAJ_P0063171 Synpo2 protein_coding protein_coding MGP_CBAJ_T0063172.1 MGP_CBAJ_G0027523.1 mouse_genomes_project 3 134314747 134478904 - MGP_CBAJ_P0063172 Synpo2 protein_coding protein_coding MGP_CBAJ_T0063173.1 MGP_CBAJ_G0027523.1 mouse_genomes_project 3 134314747 134478853 - MGP_CBAJ_P0063173 Synpo2 protein_coding protein_coding MGP_CBAJ_T0063174.1 MGP_CBAJ_G0027523.1 mouse_genomes_project 3 134344016 134478904 - MGP_CBAJ_P0063174 Synpo2 protein_coding protein_coding MGP_CBAJ_T0063175.1 MGP_CBAJ_G0027523.1 mouse_genomes_project 3 134346099 134350410 - MGP_CBAJ_P0063175 Synpo2 protein_coding protein_coding MGP_CBAJ_T0063176.1 MGP_CBAJ_G0027523.1 mouse_genomes_project 3 134348380 134352099 - MGP_CBAJ_P0063176 Synpo2 protein_coding protein_coding MGP_CBAJ_T0063177.1 MGP_CBAJ_G0027523.1 mouse_genomes_project 3 134422199 134478906 - Synpo2 protein_coding processed_transcript MGP_CBAJ_T0010379.1 MGP_CBAJ_G0008517.1 mouse_genomes_project 3 29288289 29288397 + Mir21b miRNA miRNA MGP_CBAJ_T0001195.1 MGP_CBAJ_G0001122.1 mouse_genomes_project 3 69113666 69114615 - TEC TEC MGP_CBAJ_T0007571.1 MGP_CBAJ_G0006187.1 mouse_genomes_project 3 127603571 127620168 - 1700061I17Rik lincRNA lincRNA MGP_CBAJ_T0061677.1 MGP_CBAJ_G0027155.1 mouse_genomes_project 3 97419615 97431452 + Ilf2 protein_coding retained_intron MGP_CBAJ_T0061678.1 MGP_CBAJ_G0027155.1 mouse_genomes_project 3 97419629 97422796 + Ilf2 protein_coding retained_intron MGP_CBAJ_T0061679.1 MGP_CBAJ_G0027155.1 mouse_genomes_project 3 97419636 97425853 + Ilf2 protein_coding retained_intron MGP_CBAJ_T0061680.1 MGP_CBAJ_G0027155.1 mouse_genomes_project 3 97419636 97431868 + MGP_CBAJ_P0061680 Ilf2 protein_coding protein_coding MGP_CBAJ_T0061681.1 MGP_CBAJ_G0027155.1 mouse_genomes_project 3 97419646 97428951 + Ilf2 protein_coding retained_intron MGP_CBAJ_T0061682.1 MGP_CBAJ_G0027155.1 mouse_genomes_project 3 97424168 97429877 + Ilf2 protein_coding retained_intron MGP_CBAJ_T0004238.1 MGP_CBAJ_G0003715.1 mouse_genomes_project 3 112701681 112704149 + Gm15886 antisense antisense MGP_CBAJ_T0004239.1 MGP_CBAJ_G0003715.1 mouse_genomes_project 3 112701702 112718750 + Gm15886 antisense antisense MGP_CBAJ_T0004240.1 MGP_CBAJ_G0003715.1 mouse_genomes_project 3 112702037 112707712 + Gm15886 antisense antisense MGP_CBAJ_T0004241.1 MGP_CBAJ_G0003715.1 mouse_genomes_project 3 112707130 112708123 + Gm15886 antisense antisense MGP_CBAJ_T0007493.1 MGP_CBAJ_G0006128.1 mouse_genomes_project 3 89279018 89281400 + Gm38096 lincRNA lincRNA MGP_CBAJ_T0014054.1 MGP_CBAJ_G0012166.1 mouse_genomes_project 3 117750299 117750828 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013822.1 MGP_CBAJ_G0011934.1 mouse_genomes_project 3 41594812 41595260 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013901.1 MGP_CBAJ_G0012013.1 mouse_genomes_project 3 69790750 69791009 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099235.1 MGP_CBAJ_G0037490.1 mouse_genomes_project 3 175426532 175426639 - Gm23941 snRNA snRNA MGP_CBAJ_T0061807.1 MGP_CBAJ_G0027229.1 mouse_genomes_project 3 102027320 102052618 + MGP_CBAJ_P0061807 Rorc protein_coding protein_coding MGP_CBAJ_T0061808.1 MGP_CBAJ_G0027229.1 mouse_genomes_project 3 102031948 102053054 + MGP_CBAJ_P0061808 Rorc protein_coding protein_coding MGP_CBAJ_T0061809.1 MGP_CBAJ_G0027229.1 mouse_genomes_project 3 102031976 102052424 + Rorc protein_coding retained_intron MGP_CBAJ_T0061810.1 MGP_CBAJ_G0027229.1 mouse_genomes_project 3 102032032 102052426 + MGP_CBAJ_P0061810 Rorc protein_coding protein_coding MGP_CBAJ_T0013919.1 MGP_CBAJ_G0012031.1 mouse_genomes_project 3 74047024 74047900 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007597.1 MGP_CBAJ_G0006206.1 mouse_genomes_project 3 142847196 142848181 + Gm42997 lincRNA lincRNA MGP_CBAJ_T0007598.1 MGP_CBAJ_G0006206.1 mouse_genomes_project 3 142847337 142897645 + Gm42997 lincRNA lincRNA MGP_CBAJ_T0013830.1 MGP_CBAJ_G0011942.1 mouse_genomes_project 3 45036709 45037052 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004282.1 MGP_CBAJ_G0003739.1 mouse_genomes_project 3 137977425 137983827 - Gm17225 antisense antisense MGP_CBAJ_T0013938.1 MGP_CBAJ_G0012050.1 mouse_genomes_project 3 81966990 81967329 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100459.1 MGP_CBAJ_G0038714.1 mouse_genomes_project 3 87616004 87616144 + Gm22531 snoRNA snoRNA MGP_CBAJ_T0001301.1 MGP_CBAJ_G0001228.1 mouse_genomes_project 3 139846803 139848793 + TEC TEC MGP_CBAJ_T0001302.1 MGP_CBAJ_G0001228.1 mouse_genomes_project 3 139846804 139848793 + TEC TEC MGP_CBAJ_T0007634.1 MGP_CBAJ_G0006238.1 mouse_genomes_project 3 156799196 156813954 + A830019L24Rik lincRNA lincRNA MGP_CBAJ_T0007635.1 MGP_CBAJ_G0006238.1 mouse_genomes_project 3 156799670 156815790 + A830019L24Rik lincRNA lincRNA MGP_CBAJ_T0063317.1 MGP_CBAJ_G0027545.1 mouse_genomes_project 3 141229710 141299736 - MGP_CBAJ_P0063317 Enpep protein_coding protein_coding MGP_CBAJ_T0063318.1 MGP_CBAJ_G0027545.1 mouse_genomes_project 3 141230812 141299280 - MGP_CBAJ_P0063318 Enpep protein_coding nonsense_mediated_decay MGP_CBAJ_T0063319.1 MGP_CBAJ_G0027545.1 mouse_genomes_project 3 141238776 141244298 - Enpep protein_coding retained_intron MGP_CBAJ_T0063320.1 MGP_CBAJ_G0027545.1 mouse_genomes_project 3 141238947 141274407 - MGP_CBAJ_P0063320 Enpep protein_coding nonsense_mediated_decay MGP_CBAJ_T0063321.1 MGP_CBAJ_G0027545.1 mouse_genomes_project 3 141263965 141299736 - Enpep protein_coding retained_intron MGP_CBAJ_T0059983.1 MGP_CBAJ_G0026825.1 mouse_genomes_project 3 31017074 31132643 - MGP_CBAJ_P0059983 Slc7a14 protein_coding protein_coding MGP_CBAJ_T0059984.1 MGP_CBAJ_G0026825.1 mouse_genomes_project 3 31039087 31076236 - MGP_CBAJ_P0059984 Slc7a14 protein_coding protein_coding MGP_CBAJ_T0004293.1 MGP_CBAJ_G0003748.1 mouse_genomes_project 3 145919268 145967913 + Gm42567 antisense antisense MGP_CBAJ_T0001199.1 MGP_CBAJ_G0001126.1 mouse_genomes_project 3 69776675 69777784 + TEC TEC MGP_CBAJ_T0062837.1 MGP_CBAJ_G0027458.1 mouse_genomes_project 3 118131074 118147068 + Taf13 protein_coding processed_transcript MGP_CBAJ_T0062838.1 MGP_CBAJ_G0027458.1 mouse_genomes_project 3 118131075 118147767 + Taf13 protein_coding processed_transcript MGP_CBAJ_T0062839.1 MGP_CBAJ_G0027458.1 mouse_genomes_project 3 118131075 118148920 + MGP_CBAJ_P0062839 Taf13 protein_coding protein_coding MGP_CBAJ_T0062840.1 MGP_CBAJ_G0027458.1 mouse_genomes_project 3 118131087 118132674 + Taf13 protein_coding retained_intron MGP_CBAJ_T0062645.1 MGP_CBAJ_G0027409.1 mouse_genomes_project 3 115656212 115674992 - MGP_CBAJ_P0062645 Chil6 protein_coding protein_coding MGP_CBAJ_T0013823.1 MGP_CBAJ_G0011935.1 mouse_genomes_project 3 42282544 42283007 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0062668.1 MGP_CBAJ_G0027413.1 mouse_genomes_project 3 115979397 116029427 + MGP_CBAJ_P0062668 Lrif1 protein_coding protein_coding MGP_CBAJ_T0062669.1 MGP_CBAJ_G0027413.1 mouse_genomes_project 3 115979408 116025721 + Lrif1 protein_coding processed_transcript MGP_CBAJ_T0062670.1 MGP_CBAJ_G0027413.1 mouse_genomes_project 3 116013654 116025734 + MGP_CBAJ_P0062670 Lrif1 protein_coding protein_coding MGP_CBAJ_T0062671.1 MGP_CBAJ_G0027413.1 mouse_genomes_project 3 116013819 116030100 + MGP_CBAJ_P0062671 Lrif1 protein_coding protein_coding MGP_CBAJ_T0062672.1 MGP_CBAJ_G0027413.1 mouse_genomes_project 3 116013819 116027905 + MGP_CBAJ_P0062672 Lrif1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062673.1 MGP_CBAJ_G0027413.1 mouse_genomes_project 3 116013834 116025572 + MGP_CBAJ_P0062673 Lrif1 protein_coding protein_coding MGP_CBAJ_T0062674.1 MGP_CBAJ_G0027413.1 mouse_genomes_project 3 116013851 116028141 + Lrif1 protein_coding retained_intron MGP_CBAJ_T0062675.1 MGP_CBAJ_G0027413.1 mouse_genomes_project 3 116013852 116018589 + Lrif1 protein_coding retained_intron MGP_CBAJ_T0062676.1 MGP_CBAJ_G0027413.1 mouse_genomes_project 3 116013852 116027110 + Lrif1 protein_coding processed_transcript MGP_CBAJ_T0062677.1 MGP_CBAJ_G0027413.1 mouse_genomes_project 3 116013862 116030097 + MGP_CBAJ_P0062677 Lrif1 protein_coding protein_coding MGP_CBAJ_T0062678.1 MGP_CBAJ_G0027413.1 mouse_genomes_project 3 116013893 116025586 + MGP_CBAJ_P0062678 Lrif1 protein_coding protein_coding MGP_CBAJ_T0062679.1 MGP_CBAJ_G0027413.1 mouse_genomes_project 3 116026436 116027350 + Lrif1 protein_coding retained_intron MGP_CBAJ_T0099189.1 MGP_CBAJ_G0037444.1 mouse_genomes_project 3 95699163 95699270 - Gm26465 snRNA snRNA MGP_CBAJ_T0063082.1 MGP_CBAJ_G0027505.1 mouse_genomes_project 3 132273326 132308659 + MGP_CBAJ_P0063082 Alg14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063083.1 MGP_CBAJ_G0027505.1 mouse_genomes_project 3 132273376 132357003 + MGP_CBAJ_P0063083 Alg14 protein_coding protein_coding MGP_CBAJ_T0063084.1 MGP_CBAJ_G0027505.1 mouse_genomes_project 3 132273418 132309121 + MGP_CBAJ_P0063084 Alg14 protein_coding protein_coding MGP_CBAJ_T0001300.1 MGP_CBAJ_G0001227.1 mouse_genomes_project 3 139648813 139649489 - TEC TEC MGP_CBAJ_T0014114.1 MGP_CBAJ_G0012226.1 mouse_genomes_project 3 141439185 141440228 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007488.1 MGP_CBAJ_G0006124.1 mouse_genomes_project 3 88594466 88599677 + Gm30043 lincRNA lincRNA MGP_CBAJ_T0013997.1 MGP_CBAJ_G0012109.1 mouse_genomes_project 3 103012343 103012879 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063537.1 MGP_CBAJ_G0027586.1 mouse_genomes_project 3 148422822 148501805 + MGP_CBAJ_P0063537 Slc39a8 protein_coding protein_coding MGP_CBAJ_T0063538.1 MGP_CBAJ_G0027586.1 mouse_genomes_project 3 148423197 148471737 + Slc39a8 protein_coding retained_intron MGP_CBAJ_T0063539.1 MGP_CBAJ_G0027586.1 mouse_genomes_project 3 148426965 148501985 + MGP_CBAJ_P0063539 Slc39a8 protein_coding protein_coding MGP_CBAJ_T0063540.1 MGP_CBAJ_G0027586.1 mouse_genomes_project 3 148427031 148501983 + MGP_CBAJ_P0063540 Slc39a8 protein_coding protein_coding MGP_CBAJ_T0063541.1 MGP_CBAJ_G0027586.1 mouse_genomes_project 3 148427331 148501797 + MGP_CBAJ_P0063541 Slc39a8 protein_coding protein_coding MGP_CBAJ_T0063542.1 MGP_CBAJ_G0027586.1 mouse_genomes_project 3 148497564 148501979 + Slc39a8 protein_coding retained_intron MGP_CBAJ_T0061757.1 MGP_CBAJ_G0027194.1 mouse_genomes_project 3 99942383 99943963 - MGP_CBAJ_P0061757 Lce6a protein_coding protein_coding MGP_CBAJ_T0061758.1 MGP_CBAJ_G0027194.1 mouse_genomes_project 3 99942387 99943483 - MGP_CBAJ_P0061758 Lce6a protein_coding protein_coding MGP_CBAJ_T0011407.1 MGP_CBAJ_G0009545.1 mouse_genomes_project 3 34707693 34707907 + Gm27403 misc_RNA misc_RNA MGP_CBAJ_T0013734.1 MGP_CBAJ_G0011846.1 mouse_genomes_project 3 9463293 9464307 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062754.1 MGP_CBAJ_G0027438.1 mouse_genomes_project 3 117459441 117464137 - MGP_CBAJ_P0062754 Gstm2 protein_coding protein_coding MGP_CBAJ_T0062755.1 MGP_CBAJ_G0027438.1 mouse_genomes_project 3 117459731 117464044 - MGP_CBAJ_P0062755 Gstm2 protein_coding protein_coding MGP_CBAJ_T0062756.1 MGP_CBAJ_G0027438.1 mouse_genomes_project 3 117459788 117464077 - MGP_CBAJ_P0062756 Gstm2 protein_coding unknown_likely_coding MGP_CBAJ_T0062757.1 MGP_CBAJ_G0027438.1 mouse_genomes_project 3 117462744 117464105 - Gstm2 protein_coding retained_intron MGP_CBAJ_T0062758.1 MGP_CBAJ_G0027438.1 mouse_genomes_project 3 117463165 117464105 - Gstm2 protein_coding retained_intron MGP_CBAJ_T0013767.1 MGP_CBAJ_G0011879.1 mouse_genomes_project 3 19607823 19608033 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001357.1 MGP_CBAJ_G0001283.1 mouse_genomes_project 3 172542350 172543549 - TEC TEC MGP_CBAJ_T0001117.1 MGP_CBAJ_G0001046.1 mouse_genomes_project 3 38149812 38153287 + TEC TEC MGP_CBAJ_T0062279.1 MGP_CBAJ_G0027323.1 mouse_genomes_project 3 105938914 105940578 - MGP_CBAJ_P0062279 Gm17651 protein_coding protein_coding MGP_CBAJ_T0004136.1 MGP_CBAJ_G0003641.1 mouse_genomes_project 3 32464417 32464959 - Gm37592 antisense antisense MGP_CBAJ_T0061738.1 MGP_CBAJ_G0027177.1 mouse_genomes_project 3 99379582 99387330 - MGP_CBAJ_P0061738 Lelp1 protein_coding protein_coding MGP_CBAJ_T0099188.1 MGP_CBAJ_G0037443.1 mouse_genomes_project 3 95536471 95536633 + Gm23054 snRNA snRNA MGP_CBAJ_T0017733.1 MGP_CBAJ_G0015263.1 mouse_genomes_project 3 126250072 126258771 - A930005H10Rik processed_transcript antisense MGP_CBAJ_T0017734.1 MGP_CBAJ_G0015263.1 mouse_genomes_project 3 126250072 126258735 - A930005H10Rik processed_transcript antisense MGP_CBAJ_T0017735.1 MGP_CBAJ_G0015263.1 mouse_genomes_project 3 126250074 126258594 - A930005H10Rik processed_transcript antisense MGP_CBAJ_T0017736.1 MGP_CBAJ_G0015263.1 mouse_genomes_project 3 126250277 126258745 - A930005H10Rik processed_transcript antisense MGP_CBAJ_T0017737.1 MGP_CBAJ_G0015263.1 mouse_genomes_project 3 126256641 126258738 - A930005H10Rik processed_transcript retained_intron MGP_CBAJ_T0017738.1 MGP_CBAJ_G0015263.1 mouse_genomes_project 3 126256740 126258529 - A930005H10Rik processed_transcript retained_intron MGP_CBAJ_T0017739.1 MGP_CBAJ_G0015263.1 mouse_genomes_project 3 126258463 126258771 - A930005H10Rik processed_transcript processed_transcript MGP_CBAJ_T0060184.1 MGP_CBAJ_G0026858.1 mouse_genomes_project 3 37582015 37587469 - MGP_CBAJ_P0060184 Il2 protein_coding protein_coding MGP_CBAJ_T0062799.1 MGP_CBAJ_G0027450.1 mouse_genomes_project 3 117803132 117882940 + MGP_CBAJ_P0062799 Sort1 protein_coding protein_coding MGP_CBAJ_T0062800.1 MGP_CBAJ_G0027450.1 mouse_genomes_project 3 117803141 117883008 + MGP_CBAJ_P0062800 Sort1 protein_coding protein_coding MGP_CBAJ_T0062801.1 MGP_CBAJ_G0027450.1 mouse_genomes_project 3 117876963 117882935 + Sort1 protein_coding retained_intron MGP_CBAJ_T0017764.1 MGP_CBAJ_G0015273.1 mouse_genomes_project 3 169392577 169395989 + AI606473 processed_transcript lincRNA MGP_CBAJ_T0017765.1 MGP_CBAJ_G0015273.1 mouse_genomes_project 3 169393731 169394533 + AI606473 processed_transcript retained_intron MGP_CBAJ_T0007609.1 MGP_CBAJ_G0006216.1 mouse_genomes_project 3 146031592 146053346 - Gm42563 lincRNA lincRNA MGP_CBAJ_T0007618.1 MGP_CBAJ_G0006224.1 mouse_genomes_project 3 149725179 149727482 - Gm43356 lincRNA lincRNA MGP_CBAJ_T0060096.1 MGP_CBAJ_G0026844.1 mouse_genomes_project 3 36220174 36260933 - MGP_CBAJ_P0060096 Dcun1d1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060097.1 MGP_CBAJ_G0026844.1 mouse_genomes_project 3 36220484 36260884 - MGP_CBAJ_P0060097 Dcun1d1 protein_coding protein_coding MGP_CBAJ_T0060098.1 MGP_CBAJ_G0026844.1 mouse_genomes_project 3 36220510 36249271 - MGP_CBAJ_P0060098 Dcun1d1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060099.1 MGP_CBAJ_G0026844.1 mouse_genomes_project 3 36225009 36260431 - MGP_CBAJ_P0060099 Dcun1d1 protein_coding protein_coding MGP_CBAJ_T0060100.1 MGP_CBAJ_G0026844.1 mouse_genomes_project 3 36225073 36237963 - Dcun1d1 protein_coding processed_transcript MGP_CBAJ_T0060101.1 MGP_CBAJ_G0026844.1 mouse_genomes_project 3 36237261 36260912 - Dcun1d1 protein_coding processed_transcript MGP_CBAJ_T0060102.1 MGP_CBAJ_G0026844.1 mouse_genomes_project 3 36244238 36260921 - Dcun1d1 protein_coding retained_intron MGP_CBAJ_T0060103.1 MGP_CBAJ_G0026844.1 mouse_genomes_project 3 36247090 36258216 - MGP_CBAJ_P0060103 Dcun1d1 protein_coding protein_coding MGP_CBAJ_T0060104.1 MGP_CBAJ_G0026844.1 mouse_genomes_project 3 36247093 36265528 - MGP_CBAJ_P0060104 Dcun1d1 protein_coding protein_coding MGP_CBAJ_T0060105.1 MGP_CBAJ_G0026844.1 mouse_genomes_project 3 36256584 36259555 - Dcun1d1 protein_coding retained_intron MGP_CBAJ_T0060680.1 MGP_CBAJ_G0026959.1 mouse_genomes_project 3 67629841 67655271 - MGP_CBAJ_P0060680 protein_coding protein_coding MGP_CBAJ_T0062985.1 MGP_CBAJ_G0027488.1 mouse_genomes_project 3 127010318 127020630 + Lrrc39 protein_coding retained_intron MGP_CBAJ_T0062986.1 MGP_CBAJ_G0027488.1 mouse_genomes_project 3 127010323 127030445 + MGP_CBAJ_P0062986 Lrrc39 protein_coding protein_coding MGP_CBAJ_T0007615.1 MGP_CBAJ_G0006221.1 mouse_genomes_project 3 146933188 147129004 - lincRNA lincRNA MGP_CBAJ_T0062157.1 MGP_CBAJ_G0027288.1 mouse_genomes_project 3 104228841 104246597 + MGP_CBAJ_P0062157 Sv2a protein_coding protein_coding MGP_CBAJ_T0062158.1 MGP_CBAJ_G0027288.1 mouse_genomes_project 3 104234351 104236113 + Sv2a protein_coding retained_intron MGP_CBAJ_T0062159.1 MGP_CBAJ_G0027288.1 mouse_genomes_project 3 104243622 104246594 + Sv2a protein_coding processed_transcript MGP_CBAJ_T0062228.1 MGP_CBAJ_G0027312.1 mouse_genomes_project 3 104978154 105011424 - MGP_CBAJ_P0062228 Cd160 protein_coding protein_coding MGP_CBAJ_T0062229.1 MGP_CBAJ_G0027312.1 mouse_genomes_project 3 104978154 105011424 - MGP_CBAJ_P0062229 Cd160 protein_coding protein_coding MGP_CBAJ_T0062230.1 MGP_CBAJ_G0027312.1 mouse_genomes_project 3 104979546 104996637 - MGP_CBAJ_P0062230 Cd160 protein_coding protein_coding MGP_CBAJ_T0017761.1 MGP_CBAJ_G0015270.1 mouse_genomes_project 3 156446181 156462437 + Gm43646 processed_transcript processed_transcript MGP_CBAJ_T0001252.1 MGP_CBAJ_G0001179.1 mouse_genomes_project 3 121684128 121687735 + TEC TEC MGP_CBAJ_T0004158.1 MGP_CBAJ_G0003658.1 mouse_genomes_project 3 54458103 54459104 - Gm20402 antisense antisense MGP_CBAJ_T0007592.1 MGP_CBAJ_G0006201.1 mouse_genomes_project 3 139706274 139746577 + 9830132P13Rik lincRNA lincRNA MGP_CBAJ_T0060548.1 MGP_CBAJ_G0026925.1 mouse_genomes_project 3 60693578 60699763 - MGP_CBAJ_P0060548 Pfn2 protein_coding protein_coding MGP_CBAJ_T0060549.1 MGP_CBAJ_G0026925.1 mouse_genomes_project 3 60693588 60698829 - MGP_CBAJ_P0060549 Pfn2 protein_coding protein_coding MGP_CBAJ_T0060550.1 MGP_CBAJ_G0026925.1 mouse_genomes_project 3 60694791 60697562 - MGP_CBAJ_P0060550 Pfn2 protein_coding protein_coding MGP_CBAJ_T0060551.1 MGP_CBAJ_G0026925.1 mouse_genomes_project 3 60696344 60699233 - MGP_CBAJ_P0060551 Pfn2 protein_coding protein_coding MGP_CBAJ_T0001167.1 MGP_CBAJ_G0001094.1 mouse_genomes_project 3 54226422 54235722 - TEC TEC MGP_CBAJ_T0099201.1 MGP_CBAJ_G0037456.1 mouse_genomes_project 3 104530504 104530669 + Gm24136 snRNA snRNA MGP_CBAJ_T0014156.1 MGP_CBAJ_G0012268.1 mouse_genomes_project 3 153301521 153303160 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061695.1 MGP_CBAJ_G0027158.1 mouse_genomes_project 3 97455180 97458539 - MGP_CBAJ_P0061695 S100a1 protein_coding protein_coding MGP_CBAJ_T0061696.1 MGP_CBAJ_G0027158.1 mouse_genomes_project 3 97455183 97458425 - MGP_CBAJ_P0061696 S100a1 protein_coding protein_coding MGP_CBAJ_T0014140.1 MGP_CBAJ_G0012252.1 mouse_genomes_project 3 148588257 148588557 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007526.1 MGP_CBAJ_G0006149.1 mouse_genomes_project 3 104446273 104469312 + lincRNA lincRNA MGP_CBAJ_T0007529.1 MGP_CBAJ_G0006149.1 mouse_genomes_project 3 104452119 104469311 + lincRNA lincRNA MGP_CBAJ_T0060981.1 MGP_CBAJ_G0027032.1 mouse_genomes_project 3 90126888 90286825 - MGP_CBAJ_P0060981 Trim2 protein_coding protein_coding MGP_CBAJ_T0060982.1 MGP_CBAJ_G0027032.1 mouse_genomes_project 3 90126889 90238831 - MGP_CBAJ_P0060982 Trim2 protein_coding protein_coding MGP_CBAJ_T0060983.1 MGP_CBAJ_G0027032.1 mouse_genomes_project 3 90126890 90195554 - MGP_CBAJ_P0060983 Trim2 protein_coding protein_coding MGP_CBAJ_T0060984.1 MGP_CBAJ_G0027032.1 mouse_genomes_project 3 90128323 90195542 - MGP_CBAJ_P0060984 Trim2 protein_coding protein_coding MGP_CBAJ_T0060985.1 MGP_CBAJ_G0027032.1 mouse_genomes_project 3 90129789 90187504 - MGP_CBAJ_P0060985 Trim2 protein_coding protein_coding MGP_CBAJ_T0060986.1 MGP_CBAJ_G0027032.1 mouse_genomes_project 3 90130155 90195510 - Trim2 protein_coding retained_intron MGP_CBAJ_T0060987.1 MGP_CBAJ_G0027032.1 mouse_genomes_project 3 90130170 90252837 - MGP_CBAJ_P0060987 Trim2 protein_coding protein_coding MGP_CBAJ_T0060989.1 MGP_CBAJ_G0027032.1 mouse_genomes_project 3 90145838 90164821 - Trim2 protein_coding retained_intron MGP_CBAJ_T0060990.1 MGP_CBAJ_G0027032.1 mouse_genomes_project 3 90162683 90195539 - Trim2 protein_coding retained_intron MGP_CBAJ_T0060991.1 MGP_CBAJ_G0027032.1 mouse_genomes_project 3 90164959 90165846 - Trim2 protein_coding processed_transcript MGP_CBAJ_T0060992.1 MGP_CBAJ_G0027032.1 mouse_genomes_project 3 90166503 90287413 - MGP_CBAJ_P0060992 Trim2 protein_coding protein_coding MGP_CBAJ_T0060993.1 MGP_CBAJ_G0027032.1 mouse_genomes_project 3 90166514 90287462 - MGP_CBAJ_P0060993 Trim2 protein_coding protein_coding MGP_CBAJ_T0060994.1 MGP_CBAJ_G0027032.1 mouse_genomes_project 3 90167662 90238388 - MGP_CBAJ_P0060994 Trim2 protein_coding protein_coding MGP_CBAJ_T0060995.1 MGP_CBAJ_G0027032.1 mouse_genomes_project 3 90181147 90195526 - Trim2 protein_coding retained_intron MGP_CBAJ_T0060996.1 MGP_CBAJ_G0027032.1 mouse_genomes_project 3 90182444 90195539 - Trim2 protein_coding retained_intron MGP_CBAJ_T0060997.1 MGP_CBAJ_G0027032.1 mouse_genomes_project 3 90183046 90195539 - MGP_CBAJ_P0060997 Trim2 protein_coding protein_coding MGP_CBAJ_T0060998.1 MGP_CBAJ_G0027032.1 mouse_genomes_project 3 90236701 90238388 - Trim2 protein_coding processed_transcript MGP_CBAJ_T0060999.1 MGP_CBAJ_G0027032.1 mouse_genomes_project 3 90281976 90286757 - Trim2 protein_coding processed_transcript MGP_CBAJ_T0061000.1 MGP_CBAJ_G0027032.1 mouse_genomes_project 3 90286861 90288896 - Trim2 protein_coding processed_transcript MGP_CBAJ_T0098364.1 MGP_CBAJ_G0036630.1 mouse_genomes_project 3 113507899 113509111 - 4930509H03Rik sense_intronic sense_intronic MGP_CBAJ_T0060672.1 MGP_CBAJ_G0026955.1 mouse_genomes_project 3 67362493 67383482 - MGP_CBAJ_P0060672 E130311K13Rik protein_coding protein_coding MGP_CBAJ_T0060673.1 MGP_CBAJ_G0026955.1 mouse_genomes_project 3 67374769 67383401 - E130311K13Rik protein_coding processed_transcript MGP_CBAJ_T0060674.1 MGP_CBAJ_G0026955.1 mouse_genomes_project 3 67380825 67383401 - E130311K13Rik protein_coding retained_intron MGP_CBAJ_T0061768.1 MGP_CBAJ_G0027204.1 mouse_genomes_project 3 100094237 100096463 - MGP_CBAJ_P0061768 Lce1h protein_coding protein_coding MGP_CBAJ_T0014117.1 MGP_CBAJ_G0012229.1 mouse_genomes_project 3 142880576 142880874 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001136.1 MGP_CBAJ_G0001065.1 mouse_genomes_project 3 48834775 48837498 - TEC TEC MGP_CBAJ_T0062256.1 MGP_CBAJ_G0027318.1 mouse_genomes_project 3 105398438 105422154 - MGP_CBAJ_P0062256 Bcl9 protein_coding protein_coding MGP_CBAJ_T0062257.1 MGP_CBAJ_G0027318.1 mouse_genomes_project 3 105399404 105411297 - MGP_CBAJ_P0062257 Bcl9 protein_coding protein_coding MGP_CBAJ_T0062258.1 MGP_CBAJ_G0027318.1 mouse_genomes_project 3 105405239 105408786 - Bcl9 protein_coding processed_transcript MGP_CBAJ_T0062259.1 MGP_CBAJ_G0027318.1 mouse_genomes_project 3 105409285 105423710 - Bcl9 protein_coding retained_intron MGP_CBAJ_T0062260.1 MGP_CBAJ_G0027318.1 mouse_genomes_project 3 105411317 105424226 - Bcl9 protein_coding processed_transcript MGP_CBAJ_T0062261.1 MGP_CBAJ_G0027318.1 mouse_genomes_project 3 105411342 105489791 - Bcl9 protein_coding processed_transcript MGP_CBAJ_T0062262.1 MGP_CBAJ_G0027318.1 mouse_genomes_project 3 105411342 105422915 - Bcl9 protein_coding processed_transcript MGP_CBAJ_T0062263.1 MGP_CBAJ_G0027318.1 mouse_genomes_project 3 105416614 105418999 - Bcl9 protein_coding retained_intron MGP_CBAJ_T0063735.1 MGP_CBAJ_G0027628.1 mouse_genomes_project 3 158330226 158366514 - MGP_CBAJ_P0063735 Sh3glb1 protein_coding protein_coding MGP_CBAJ_T0063736.1 MGP_CBAJ_G0027628.1 mouse_genomes_project 3 158331443 158344007 - MGP_CBAJ_P0063736 Sh3glb1 protein_coding protein_coding MGP_CBAJ_T0063737.1 MGP_CBAJ_G0027628.1 mouse_genomes_project 3 158333459 158366727 - MGP_CBAJ_P0063737 Sh3glb1 protein_coding protein_coding MGP_CBAJ_T0063738.1 MGP_CBAJ_G0027628.1 mouse_genomes_project 3 158335392 158366739 - MGP_CBAJ_P0063738 Sh3glb1 protein_coding protein_coding MGP_CBAJ_T0063739.1 MGP_CBAJ_G0027628.1 mouse_genomes_project 3 158337894 158366609 - MGP_CBAJ_P0063739 Sh3glb1 protein_coding protein_coding MGP_CBAJ_T0063740.1 MGP_CBAJ_G0027628.1 mouse_genomes_project 3 158338526 158353173 - MGP_CBAJ_P0063740 Sh3glb1 protein_coding protein_coding MGP_CBAJ_T0061059.1 MGP_CBAJ_G0027049.1 mouse_genomes_project 3 93328093 93330860 - MGP_CBAJ_P0061059 protein_coding protein_coding MGP_CBAJ_T0013915.1 MGP_CBAJ_G0012027.1 mouse_genomes_project 3 73342607 73342867 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013947.1 MGP_CBAJ_G0012059.1 mouse_genomes_project 3 84094072 84094917 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013741.1 MGP_CBAJ_G0011853.1 mouse_genomes_project 3 11805550 11805805 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063275.1 MGP_CBAJ_G0027537.1 mouse_genomes_project 3 139288212 139291129 - MGP_CBAJ_P0063275 protein_coding protein_coding MGP_CBAJ_T0013959.1 MGP_CBAJ_G0012071.1 mouse_genomes_project 3 90565443 90566434 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013908.1 MGP_CBAJ_G0012020.1 mouse_genomes_project 3 71433532 71434480 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014182.1 MGP_CBAJ_G0012294.1 mouse_genomes_project 3 166817986 166818542 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061392.1 MGP_CBAJ_G0027109.1 mouse_genomes_project 3 95942682 95944215 + MGP_CBAJ_P0061392 Fam189b protein_coding protein_coding MGP_CBAJ_T0061393.1 MGP_CBAJ_G0027109.1 mouse_genomes_project 3 95942742 95952319 + MGP_CBAJ_P0061393 Fam189b protein_coding protein_coding MGP_CBAJ_T0061394.1 MGP_CBAJ_G0027109.1 mouse_genomes_project 3 95942743 95952317 + MGP_CBAJ_P0061394 Fam189b protein_coding nonsense_mediated_decay MGP_CBAJ_T0061395.1 MGP_CBAJ_G0027109.1 mouse_genomes_project 3 95943119 95952318 + MGP_CBAJ_P0061395 Fam189b protein_coding nonsense_mediated_decay MGP_CBAJ_T0061396.1 MGP_CBAJ_G0027109.1 mouse_genomes_project 3 95943172 95952316 + MGP_CBAJ_P0061396 Fam189b protein_coding protein_coding MGP_CBAJ_T0061397.1 MGP_CBAJ_G0027109.1 mouse_genomes_project 3 95943180 95952323 + MGP_CBAJ_P0061397 Fam189b protein_coding protein_coding MGP_CBAJ_T0061398.1 MGP_CBAJ_G0027109.1 mouse_genomes_project 3 95943768 95945305 + Fam189b protein_coding retained_intron MGP_CBAJ_T0061399.1 MGP_CBAJ_G0027109.1 mouse_genomes_project 3 95950403 95951505 + Fam189b protein_coding retained_intron MGP_CBAJ_T0061400.1 MGP_CBAJ_G0027109.1 mouse_genomes_project 3 95950961 95951504 + Fam189b protein_coding retained_intron MGP_CBAJ_T0061401.1 MGP_CBAJ_G0027109.1 mouse_genomes_project 3 95951011 95951808 + Fam189b protein_coding processed_transcript MGP_CBAJ_T0010373.1 MGP_CBAJ_G0008511.1 mouse_genomes_project 3 18954807 18954877 - Mir7007 miRNA miRNA MGP_CBAJ_T0100492.1 MGP_CBAJ_G0038747.1 mouse_genomes_project 3 142993167 142993295 - Gm26090 snoRNA snoRNA MGP_CBAJ_T0061494.1 MGP_CBAJ_G0027125.1 mouse_genomes_project 3 96188821 96190627 - MGP_CBAJ_P0061494 Lenep protein_coding protein_coding MGP_CBAJ_T0061617.1 MGP_CBAJ_G0027143.1 mouse_genomes_project 3 97007421 97138672 + MGP_CBAJ_P0061617 Nup210l protein_coding protein_coding MGP_CBAJ_T0061618.1 MGP_CBAJ_G0027143.1 mouse_genomes_project 3 97007423 97138703 + MGP_CBAJ_P0061618 Nup210l protein_coding protein_coding MGP_CBAJ_T0101837.1 MGP_CBAJ_G0039868.1 mouse_genomes_project 3 298180 298608 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0059769.1 MGP_CBAJ_G0026786.1 mouse_genomes_project 3 18305239 18355361 + MGP_CBAJ_P0059769 Trim55 protein_coding protein_coding MGP_CBAJ_T0059770.1 MGP_CBAJ_G0026786.1 mouse_genomes_project 3 18305273 18310805 + Trim55 protein_coding processed_transcript MGP_CBAJ_T0007364.1 MGP_CBAJ_G0006030.1 mouse_genomes_project 3 15726492 15733320 - Gm30340 lincRNA lincRNA MGP_CBAJ_T0013837.1 MGP_CBAJ_G0011949.1 mouse_genomes_project 3 48069598 48069840 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061452.1 MGP_CBAJ_G0027117.1 mouse_genomes_project 3 96038386 96040664 - Slc50a1 protein_coding retained_intron MGP_CBAJ_T0061453.1 MGP_CBAJ_G0027117.1 mouse_genomes_project 3 96038386 96040667 - Slc50a1 protein_coding retained_intron MGP_CBAJ_T0061454.1 MGP_CBAJ_G0027117.1 mouse_genomes_project 3 96038386 96040636 - MGP_CBAJ_P0061454 Slc50a1 protein_coding protein_coding MGP_CBAJ_T0061455.1 MGP_CBAJ_G0027117.1 mouse_genomes_project 3 96038386 96040711 - MGP_CBAJ_P0061455 Slc50a1 protein_coding protein_coding MGP_CBAJ_T0061456.1 MGP_CBAJ_G0027117.1 mouse_genomes_project 3 96038386 96040620 - MGP_CBAJ_P0061456 Slc50a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061457.1 MGP_CBAJ_G0027117.1 mouse_genomes_project 3 96038388 96040666 - Slc50a1 protein_coding retained_intron MGP_CBAJ_T0061458.1 MGP_CBAJ_G0027117.1 mouse_genomes_project 3 96038388 96040710 - Slc50a1 protein_coding retained_intron MGP_CBAJ_T0061459.1 MGP_CBAJ_G0027117.1 mouse_genomes_project 3 96039211 96040711 - MGP_CBAJ_P0061459 Slc50a1 protein_coding protein_coding MGP_CBAJ_T0061460.1 MGP_CBAJ_G0027117.1 mouse_genomes_project 3 96039285 96040368 - Slc50a1 protein_coding processed_transcript MGP_CBAJ_T0017722.1 MGP_CBAJ_G0015258.1 mouse_genomes_project 3 113785139 113805153 - Gm43584 processed_transcript processed_transcript MGP_CBAJ_T0004187.1 MGP_CBAJ_G0003680.1 mouse_genomes_project 3 89689127 89709409 - Gm26771 antisense antisense MGP_CBAJ_T0007380.1 MGP_CBAJ_G0006039.1 mouse_genomes_project 3 20996997 20998728 - Gm43672 lincRNA lincRNA MGP_CBAJ_T0001144.1 MGP_CBAJ_G0001073.1 mouse_genomes_project 3 52939834 52942485 - TEC TEC MGP_CBAJ_T0001255.1 MGP_CBAJ_G0001182.1 mouse_genomes_project 3 127019580 127021939 - TEC TEC MGP_CBAJ_T0001108.1 MGP_CBAJ_G0001037.1 mouse_genomes_project 3 34845408 34845522 + TEC TEC MGP_CBAJ_T0060479.1 MGP_CBAJ_G0026912.1 mouse_genomes_project 3 57669258 57694470 + MGP_CBAJ_P0060479 Spg20 protein_coding protein_coding MGP_CBAJ_T0060480.1 MGP_CBAJ_G0026912.1 mouse_genomes_project 3 57669263 57686474 + Spg20 protein_coding retained_intron MGP_CBAJ_T0060481.1 MGP_CBAJ_G0026912.1 mouse_genomes_project 3 57669279 57694459 + MGP_CBAJ_P0060481 Spg20 protein_coding protein_coding MGP_CBAJ_T0060482.1 MGP_CBAJ_G0026912.1 mouse_genomes_project 3 57669288 57671403 + Spg20 protein_coding retained_intron MGP_CBAJ_T0060483.1 MGP_CBAJ_G0026912.1 mouse_genomes_project 3 57669316 57694465 + MGP_CBAJ_P0060483 Spg20 protein_coding protein_coding MGP_CBAJ_T0060484.1 MGP_CBAJ_G0026912.1 mouse_genomes_project 3 57669537 57686842 + MGP_CBAJ_P0060484 Spg20 protein_coding protein_coding MGP_CBAJ_T0060485.1 MGP_CBAJ_G0026912.1 mouse_genomes_project 3 57669746 57674411 + MGP_CBAJ_P0060485 Spg20 protein_coding protein_coding MGP_CBAJ_T0060486.1 MGP_CBAJ_G0026912.1 mouse_genomes_project 3 57673325 57674483 + MGP_CBAJ_P0060486 Spg20 protein_coding protein_coding MGP_CBAJ_T0059930.1 MGP_CBAJ_G0026814.1 mouse_genomes_project 3 30331640 30351058 + MGP_CBAJ_P0059930 Mynn protein_coding protein_coding MGP_CBAJ_T0059931.1 MGP_CBAJ_G0026814.1 mouse_genomes_project 3 30332206 30351058 + MGP_CBAJ_P0059931 Mynn protein_coding nonsense_mediated_decay MGP_CBAJ_T0059932.1 MGP_CBAJ_G0026814.1 mouse_genomes_project 3 30332212 30349553 + MGP_CBAJ_P0059932 Mynn protein_coding protein_coding MGP_CBAJ_T0059933.1 MGP_CBAJ_G0026814.1 mouse_genomes_project 3 30332214 30333734 + Mynn protein_coding retained_intron MGP_CBAJ_T0059934.1 MGP_CBAJ_G0026814.1 mouse_genomes_project 3 30332219 30349686 + MGP_CBAJ_P0059934 Mynn protein_coding nonsense_mediated_decay MGP_CBAJ_T0059935.1 MGP_CBAJ_G0026814.1 mouse_genomes_project 3 30344951 30347980 + Mynn protein_coding retained_intron MGP_CBAJ_T0013900.1 MGP_CBAJ_G0012012.1 mouse_genomes_project 3 69721881 69724263 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001213.1 MGP_CBAJ_G0001140.1 mouse_genomes_project 3 85067636 85068925 - TEC TEC MGP_CBAJ_T0064137.1 MGP_CBAJ_G0027694.1 mouse_genomes_project 3 175101805 175132746 + MGP_CBAJ_P0064137 Rpe65 protein_coding protein_coding MGP_CBAJ_T0064138.1 MGP_CBAJ_G0027694.1 mouse_genomes_project 3 175101848 175109115 + MGP_CBAJ_P0064138 Rpe65 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064139.1 MGP_CBAJ_G0027694.1 mouse_genomes_project 3 175101863 175130250 + MGP_CBAJ_P0064139 Rpe65 protein_coding protein_coding MGP_CBAJ_T0004294.1 MGP_CBAJ_G0003749.1 mouse_genomes_project 3 146372057 146674965 - antisense antisense MGP_CBAJ_T0004295.1 MGP_CBAJ_G0003749.1 mouse_genomes_project 3 146586151 146675112 - antisense antisense MGP_CBAJ_T0007470.1 MGP_CBAJ_G0006110.1 mouse_genomes_project 3 77654529 77806770 + lincRNA lincRNA MGP_CBAJ_T0007471.1 MGP_CBAJ_G0006110.1 mouse_genomes_project 3 77654564 78244546 + lincRNA lincRNA MGP_CBAJ_T0100493.1 MGP_CBAJ_G0038748.1 mouse_genomes_project 3 145070378 145070489 - Gm22322 snoRNA snoRNA MGP_CBAJ_T0014104.1 MGP_CBAJ_G0012216.1 mouse_genomes_project 3 135260269 135267693 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004317.1 MGP_CBAJ_G0003764.1 mouse_genomes_project 3 166858647 166859587 + Gm43455 antisense antisense MGP_CBAJ_T0004318.1 MGP_CBAJ_G0003764.1 mouse_genomes_project 3 166858861 166859587 + Gm43455 antisense antisense MGP_CBAJ_T0007590.1 MGP_CBAJ_G0006199.1 mouse_genomes_project 3 137741654 137743677 + Gm42827 lincRNA lincRNA MGP_CBAJ_T0014001.1 MGP_CBAJ_G0012113.1 mouse_genomes_project 3 103584760 103585238 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014073.1 MGP_CBAJ_G0012185.1 mouse_genomes_project 3 124001757 124003409 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063846.1 MGP_CBAJ_G0027654.1 mouse_genomes_project 3 160710621 160760299 - MGP_CBAJ_P0063846 Samd13 protein_coding protein_coding MGP_CBAJ_T0063847.1 MGP_CBAJ_G0027654.1 mouse_genomes_project 3 160711539 160757109 - MGP_CBAJ_P0063847 Samd13 protein_coding protein_coding MGP_CBAJ_T0063848.1 MGP_CBAJ_G0027654.1 mouse_genomes_project 3 160711550 160757221 - MGP_CBAJ_P0063848 Samd13 protein_coding protein_coding MGP_CBAJ_T0063849.1 MGP_CBAJ_G0027654.1 mouse_genomes_project 3 160711635 160760182 - MGP_CBAJ_P0063849 Samd13 protein_coding protein_coding MGP_CBAJ_T0063852.1 MGP_CBAJ_G0027654.1 mouse_genomes_project 3 160755160 160760178 - Samd13 protein_coding retained_intron MGP_CBAJ_T0063360.1 MGP_CBAJ_G0027554.1 mouse_genomes_project 3 141961131 142026209 - MGP_CBAJ_P0063360 Ccdc109b protein_coding protein_coding MGP_CBAJ_T0063361.1 MGP_CBAJ_G0027554.1 mouse_genomes_project 3 141961146 142026051 - MGP_CBAJ_P0063361 Ccdc109b protein_coding protein_coding MGP_CBAJ_T0063362.1 MGP_CBAJ_G0027554.1 mouse_genomes_project 3 141963251 142025992 - MGP_CBAJ_P0063362 Ccdc109b protein_coding protein_coding MGP_CBAJ_T0063363.1 MGP_CBAJ_G0027554.1 mouse_genomes_project 3 141976196 142026127 - MGP_CBAJ_P0063363 Ccdc109b protein_coding nonsense_mediated_decay MGP_CBAJ_T0017693.1 MGP_CBAJ_G0015244.1 mouse_genomes_project 3 37793569 37891506 + Gm43439 processed_transcript processed_transcript MGP_CBAJ_T0001114.1 MGP_CBAJ_G0001043.1 mouse_genomes_project 3 37819790 37822254 + TEC TEC MGP_CBAJ_T0013785.1 MGP_CBAJ_G0011897.1 mouse_genomes_project 3 29591565 29592004 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061698.1 MGP_CBAJ_G0027160.1 mouse_genomes_project 3 97470775 97472150 + MGP_CBAJ_P0061698 S100a14 protein_coding protein_coding MGP_CBAJ_T0061699.1 MGP_CBAJ_G0027160.1 mouse_genomes_project 3 97470786 97472757 + MGP_CBAJ_P0061699 S100a14 protein_coding protein_coding MGP_CBAJ_T0061700.1 MGP_CBAJ_G0027160.1 mouse_genomes_project 3 97470789 97472757 + MGP_CBAJ_P0061700 S100a14 protein_coding protein_coding MGP_CBAJ_T0061701.1 MGP_CBAJ_G0027160.1 mouse_genomes_project 3 97470791 97472746 + S100a14 protein_coding retained_intron MGP_CBAJ_T0099181.1 MGP_CBAJ_G0037436.1 mouse_genomes_project 3 92093075 92093182 - Gm26204 snRNA snRNA MGP_CBAJ_T0001322.1 MGP_CBAJ_G0001248.1 mouse_genomes_project 3 147985335 147993061 - TEC TEC MGP_CBAJ_T0001110.1 MGP_CBAJ_G0001039.1 mouse_genomes_project 3 36283497 36284288 - TEC TEC MGP_CBAJ_T0004177.1 MGP_CBAJ_G0003672.1 mouse_genomes_project 3 68941581 68966522 - A730090N16Rik antisense antisense MGP_CBAJ_T0013737.1 MGP_CBAJ_G0011849.1 mouse_genomes_project 3 10828973 10829937 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004235.1 MGP_CBAJ_G0003712.1 mouse_genomes_project 3 110920758 110922934 + Gm16160 antisense antisense MGP_CBAJ_T0004316.1 MGP_CBAJ_G0003763.1 mouse_genomes_project 3 163270655 163286129 + Gm43573 antisense antisense MGP_CBAJ_T0007594.1 MGP_CBAJ_G0006203.1 mouse_genomes_project 3 140471710 140781713 + lincRNA lincRNA MGP_CBAJ_T0062832.1 MGP_CBAJ_G0027456.1 mouse_genomes_project 3 118093025 118096598 + 1700013F07Rik protein_coding processed_transcript MGP_CBAJ_T0062833.1 MGP_CBAJ_G0027456.1 mouse_genomes_project 3 118096438 118101980 + 1700013F07Rik protein_coding processed_transcript MGP_CBAJ_T0062834.1 MGP_CBAJ_G0027456.1 mouse_genomes_project 3 118096445 118103622 + MGP_CBAJ_P0062834 1700013F07Rik protein_coding protein_coding MGP_CBAJ_T0060261.1 MGP_CBAJ_G0026874.1 mouse_genomes_project 3 41587257 41696551 + MGP_CBAJ_P0060261 Abhd18 protein_coding protein_coding MGP_CBAJ_T0060262.1 MGP_CBAJ_G0026874.1 mouse_genomes_project 3 41635222 41698380 + MGP_CBAJ_P0060262 Abhd18 protein_coding protein_coding MGP_CBAJ_T0060263.1 MGP_CBAJ_G0026874.1 mouse_genomes_project 3 41635354 41698378 + MGP_CBAJ_P0060263 Abhd18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060264.1 MGP_CBAJ_G0026874.1 mouse_genomes_project 3 41635383 41681820 + MGP_CBAJ_P0060264 Abhd18 protein_coding protein_coding MGP_CBAJ_T0060265.1 MGP_CBAJ_G0026874.1 mouse_genomes_project 3 41635399 41697381 + MGP_CBAJ_P0060265 Abhd18 protein_coding protein_coding MGP_CBAJ_T0060266.1 MGP_CBAJ_G0026874.1 mouse_genomes_project 3 41635401 41697398 + MGP_CBAJ_P0060266 Abhd18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060267.1 MGP_CBAJ_G0026874.1 mouse_genomes_project 3 41635466 41695637 + MGP_CBAJ_P0060267 Abhd18 protein_coding unknown_likely_coding MGP_CBAJ_T0060269.1 MGP_CBAJ_G0026874.1 mouse_genomes_project 3 41690784 41696939 + Abhd18 protein_coding processed_transcript MGP_CBAJ_T0063810.1 MGP_CBAJ_G0027645.1 mouse_genomes_project 3 160232551 160312928 + MGP_CBAJ_P0063810 Lpar3 protein_coding protein_coding MGP_CBAJ_T0063845.1 MGP_CBAJ_G0027653.1 mouse_genomes_project 3 160710619 160716759 - MGP_CBAJ_P0063845 4930503B20Rik protein_coding protein_coding MGP_CBAJ_T0063850.1 MGP_CBAJ_G0027653.1 mouse_genomes_project 3 160711704 160713748 - 4930503B20Rik protein_coding processed_transcript MGP_CBAJ_T0063851.1 MGP_CBAJ_G0027653.1 mouse_genomes_project 3 160715007 160716757 - MGP_CBAJ_P0063851 4930503B20Rik protein_coding protein_coding MGP_CBAJ_T0013843.1 MGP_CBAJ_G0011955.1 mouse_genomes_project 3 51294783 51296151 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007382.1 MGP_CBAJ_G0006041.1 mouse_genomes_project 3 22040151 22043088 + Gm37021 lincRNA lincRNA MGP_CBAJ_T0060753.1 MGP_CBAJ_G0026976.1 mouse_genomes_project 3 71735807 71922414 + MGP_CBAJ_P0060753 Iqcj protein_coding protein_coding MGP_CBAJ_T0100463.1 MGP_CBAJ_G0038718.1 mouse_genomes_project 3 92350657 92350728 - Rnu73b snoRNA snoRNA MGP_CBAJ_T0061500.1 MGP_CBAJ_G0027127.1 mouse_genomes_project 3 96205936 96208854 - MGP_CBAJ_P0061500 Cks1b protein_coding protein_coding MGP_CBAJ_T0061501.1 MGP_CBAJ_G0027127.1 mouse_genomes_project 3 96206021 96208488 - MGP_CBAJ_P0061501 Cks1b protein_coding protein_coding MGP_CBAJ_T0061502.1 MGP_CBAJ_G0027127.1 mouse_genomes_project 3 96206308 96208690 - MGP_CBAJ_P0061502 Cks1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0010389.1 MGP_CBAJ_G0008527.1 mouse_genomes_project 3 53365510 53365576 + Gm24282 miRNA miRNA MGP_CBAJ_T0060403.1 MGP_CBAJ_G0026897.1 mouse_genomes_project 3 55772527 55787166 - MGP_CBAJ_P0060403 Nhlrc3 protein_coding unknown_likely_coding MGP_CBAJ_T0060404.1 MGP_CBAJ_G0026897.1 mouse_genomes_project 3 55772533 55787285 - MGP_CBAJ_P0060404 Nhlrc3 protein_coding protein_coding MGP_CBAJ_T0060405.1 MGP_CBAJ_G0026897.1 mouse_genomes_project 3 55772538 55787276 - MGP_CBAJ_P0060405 Nhlrc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060406.1 MGP_CBAJ_G0026897.1 mouse_genomes_project 3 55782322 55785936 - Nhlrc3 protein_coding retained_intron MGP_CBAJ_T0060407.1 MGP_CBAJ_G0026897.1 mouse_genomes_project 3 55782827 55787204 - Nhlrc3 protein_coding retained_intron MGP_CBAJ_T0060408.1 MGP_CBAJ_G0026897.1 mouse_genomes_project 3 55786015 55787250 - Nhlrc3 protein_coding retained_intron MGP_CBAJ_T0062309.1 MGP_CBAJ_G0027333.1 mouse_genomes_project 3 107137505 107150872 - MGP_CBAJ_P0062309 protein_coding protein_coding MGP_CBAJ_T0062310.1 MGP_CBAJ_G0027333.1 mouse_genomes_project 3 107137904 107142958 - MGP_CBAJ_P0062310 protein_coding protein_coding MGP_CBAJ_T0061963.1 MGP_CBAJ_G0027255.1 mouse_genomes_project 3 103056157 103097728 - MGP_CBAJ_P0061963 Gabpb2 protein_coding protein_coding MGP_CBAJ_T0061964.1 MGP_CBAJ_G0027255.1 mouse_genomes_project 3 103060357 103064667 - Gabpb2 protein_coding retained_intron MGP_CBAJ_T0061965.1 MGP_CBAJ_G0027255.1 mouse_genomes_project 3 103060493 103097490 - Gabpb2 protein_coding retained_intron MGP_CBAJ_T0061966.1 MGP_CBAJ_G0027255.1 mouse_genomes_project 3 103073567 103097697 - Gabpb2 protein_coding retained_intron MGP_CBAJ_T0061967.1 MGP_CBAJ_G0027255.1 mouse_genomes_project 3 103075713 103097697 - Gabpb2 protein_coding retained_intron MGP_CBAJ_T0061968.1 MGP_CBAJ_G0027255.1 mouse_genomes_project 3 103079156 103097535 - MGP_CBAJ_P0061968 Gabpb2 protein_coding protein_coding MGP_CBAJ_T0061969.1 MGP_CBAJ_G0027255.1 mouse_genomes_project 3 103095016 103097475 - Gabpb2 protein_coding processed_transcript MGP_CBAJ_T0062501.1 MGP_CBAJ_G0027375.1 mouse_genomes_project 3 112732287 112738742 - Dclre1b protein_coding retained_intron MGP_CBAJ_T0062502.1 MGP_CBAJ_G0027375.1 mouse_genomes_project 3 112732305 112737597 - MGP_CBAJ_P0062502 Dclre1b protein_coding protein_coding MGP_CBAJ_T0062503.1 MGP_CBAJ_G0027375.1 mouse_genomes_project 3 112732370 112738505 - MGP_CBAJ_P0062503 Dclre1b protein_coding protein_coding MGP_CBAJ_T0062504.1 MGP_CBAJ_G0027375.1 mouse_genomes_project 3 112733001 112737054 - Dclre1b protein_coding retained_intron MGP_CBAJ_T0062505.1 MGP_CBAJ_G0027375.1 mouse_genomes_project 3 112733429 112738609 - MGP_CBAJ_P0062505 Dclre1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0062506.1 MGP_CBAJ_G0027375.1 mouse_genomes_project 3 112735335 112738806 - MGP_CBAJ_P0062506 Dclre1b protein_coding protein_coding MGP_CBAJ_T0063200.1 MGP_CBAJ_G0027528.1 mouse_genomes_project 3 135643050 135646939 + MGP_CBAJ_P0063200 Tram1l1 protein_coding protein_coding MGP_CBAJ_T0062759.1 MGP_CBAJ_G0027439.1 mouse_genomes_project 3 117493315 117498917 - MGP_CBAJ_P0062759 Gstm1 protein_coding unknown_likely_coding MGP_CBAJ_T0062760.1 MGP_CBAJ_G0027439.1 mouse_genomes_project 3 117493326 117494382 - Gstm1 protein_coding processed_transcript MGP_CBAJ_T0062355.1 MGP_CBAJ_G0027346.1 mouse_genomes_project 3 109449576 109459145 + MGP_CBAJ_P0062355 Trim45 protein_coding protein_coding MGP_CBAJ_T0062356.1 MGP_CBAJ_G0027346.1 mouse_genomes_project 3 109449849 109461454 + MGP_CBAJ_P0062356 Trim45 protein_coding protein_coding MGP_CBAJ_T0062357.1 MGP_CBAJ_G0027346.1 mouse_genomes_project 3 109449867 109464362 + MGP_CBAJ_P0062357 Trim45 protein_coding protein_coding MGP_CBAJ_T0062358.1 MGP_CBAJ_G0027346.1 mouse_genomes_project 3 109450294 109459500 + MGP_CBAJ_P0062358 Trim45 protein_coding protein_coding MGP_CBAJ_T0017762.1 MGP_CBAJ_G0015271.1 mouse_genomes_project 3 162326682 162341242 + Gm43574 processed_transcript processed_transcript MGP_CBAJ_T0004278.1 MGP_CBAJ_G0003736.1 mouse_genomes_project 3 134073022 134148871 - 4933405D12Rik antisense antisense MGP_CBAJ_T0004279.1 MGP_CBAJ_G0003736.1 mouse_genomes_project 3 134090863 134148871 - 4933405D12Rik antisense antisense MGP_CBAJ_T0013772.1 MGP_CBAJ_G0011884.1 mouse_genomes_project 3 20940505 20940938 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0062191.1 MGP_CBAJ_G0027304.1 mouse_genomes_project 3 104778258 104791971 + Pex11b protein_coding processed_transcript MGP_CBAJ_T0062192.1 MGP_CBAJ_G0027304.1 mouse_genomes_project 3 104778312 104791971 + MGP_CBAJ_P0062192 Pex11b protein_coding protein_coding MGP_CBAJ_T0062194.1 MGP_CBAJ_G0027304.1 mouse_genomes_project 3 104778382 104790638 + MGP_CBAJ_P0062194 Pex11b protein_coding nonsense_mediated_decay MGP_CBAJ_T0062195.1 MGP_CBAJ_G0027304.1 mouse_genomes_project 3 104778535 104779836 + Pex11b protein_coding retained_intron MGP_CBAJ_T0062196.1 MGP_CBAJ_G0027304.1 mouse_genomes_project 3 104778554 104791331 + MGP_CBAJ_P0062196 Pex11b protein_coding protein_coding MGP_CBAJ_T0062197.1 MGP_CBAJ_G0027304.1 mouse_genomes_project 3 104778715 104791331 + MGP_CBAJ_P0062197 Pex11b protein_coding protein_coding MGP_CBAJ_T0062198.1 MGP_CBAJ_G0027304.1 mouse_genomes_project 3 104779935 104790405 + Pex11b protein_coding retained_intron MGP_CBAJ_T0007660.1 MGP_CBAJ_G0006260.1 mouse_genomes_project 3 161758388 161778604 - Gm36888 lincRNA lincRNA MGP_CBAJ_T0013863.1 MGP_CBAJ_G0011975.1 mouse_genomes_project 3 57132820 57134514 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0063423.1 MGP_CBAJ_G0027568.1 mouse_genomes_project 3 144926754 144951464 - MGP_CBAJ_P0063423 Aimp1 protein_coding protein_coding MGP_CBAJ_T0063424.1 MGP_CBAJ_G0027568.1 mouse_genomes_project 3 144937797 144940791 - Aimp1 protein_coding retained_intron MGP_CBAJ_T0063425.1 MGP_CBAJ_G0027568.1 mouse_genomes_project 3 144938060 144944819 - Aimp1 protein_coding retained_intron MGP_CBAJ_T0063426.1 MGP_CBAJ_G0027568.1 mouse_genomes_project 3 144940020 144951950 - MGP_CBAJ_P0063426 Aimp1 protein_coding protein_coding MGP_CBAJ_T0063427.1 MGP_CBAJ_G0027568.1 mouse_genomes_project 3 144940110 144951702 - MGP_CBAJ_P0063427 Aimp1 protein_coding protein_coding MGP_CBAJ_T0063428.1 MGP_CBAJ_G0027568.1 mouse_genomes_project 3 144940126 144951417 - MGP_CBAJ_P0063428 Aimp1 protein_coding protein_coding MGP_CBAJ_T0063429.1 MGP_CBAJ_G0027568.1 mouse_genomes_project 3 144940821 144951704 - MGP_CBAJ_P0063429 Aimp1 protein_coding protein_coding MGP_CBAJ_T0063430.1 MGP_CBAJ_G0027568.1 mouse_genomes_project 3 144947458 144951416 - Aimp1 protein_coding retained_intron MGP_CBAJ_T0063215.1 MGP_CBAJ_G0027532.1 mouse_genomes_project 3 137354661 137426040 - MGP_CBAJ_P0063215 Ugt8a protein_coding protein_coding MGP_CBAJ_T0063216.1 MGP_CBAJ_G0027532.1 mouse_genomes_project 3 137354896 137401470 - MGP_CBAJ_P0063216 Ugt8a protein_coding protein_coding MGP_CBAJ_T0063217.1 MGP_CBAJ_G0027532.1 mouse_genomes_project 3 137399850 137425972 - Ugt8a protein_coding retained_intron MGP_CBAJ_T0063750.1 MGP_CBAJ_G0027633.1 mouse_genomes_project 3 158890607 158919615 - MGP_CBAJ_P0063750 Clca2 protein_coding protein_coding MGP_CBAJ_T0063751.1 MGP_CBAJ_G0027633.1 mouse_genomes_project 3 158892100 158919617 - MGP_CBAJ_P0063751 Clca2 protein_coding protein_coding MGP_CBAJ_T0063752.1 MGP_CBAJ_G0027633.1 mouse_genomes_project 3 158919354 158919954 - Clca2 protein_coding processed_transcript MGP_CBAJ_T0059827.1 MGP_CBAJ_G0026796.1 mouse_genomes_project 3 22825723 23924797 - MGP_CBAJ_P0059827 Naaladl2 protein_coding protein_coding MGP_CBAJ_T0059828.1 MGP_CBAJ_G0026796.1 mouse_genomes_project 3 22833730 22995580 - Naaladl2 protein_coding processed_transcript MGP_CBAJ_T0059829.1 MGP_CBAJ_G0026796.1 mouse_genomes_project 3 22834311 23138096 - MGP_CBAJ_P0059829 Naaladl2 protein_coding unknown_likely_coding MGP_CBAJ_T0059830.1 MGP_CBAJ_G0026796.1 mouse_genomes_project 3 22834380 23028357 - Naaladl2 protein_coding processed_transcript MGP_CBAJ_T0059831.1 MGP_CBAJ_G0026796.1 mouse_genomes_project 3 23667466 24306835 - Naaladl2 protein_coding retained_intron MGP_CBAJ_T0007642.1 MGP_CBAJ_G0006245.1 mouse_genomes_project 3 157238457 157240235 + Gm42704 lincRNA lincRNA MGP_CBAJ_T0001233.1 MGP_CBAJ_G0001160.1 mouse_genomes_project 3 104958361 104958885 + TEC TEC MGP_CBAJ_T0061096.1 MGP_CBAJ_G0027058.1 mouse_genomes_project 3 94174160 94197475 - MGP_CBAJ_P0061096 Pear1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061097.1 MGP_CBAJ_G0027058.1 mouse_genomes_project 3 94175365 94197480 - MGP_CBAJ_P0061097 Pear1 protein_coding protein_coding MGP_CBAJ_T0061098.1 MGP_CBAJ_G0027058.1 mouse_genomes_project 3 94175365 94263803 - MGP_CBAJ_P0061098 Pear1 protein_coding protein_coding MGP_CBAJ_T0061099.1 MGP_CBAJ_G0027058.1 mouse_genomes_project 3 94175365 94263752 - MGP_CBAJ_P0061099 Pear1 protein_coding protein_coding MGP_CBAJ_T0061100.1 MGP_CBAJ_G0027058.1 mouse_genomes_project 3 94175366 94188187 - Pear1 protein_coding retained_intron MGP_CBAJ_T0061101.1 MGP_CBAJ_G0027058.1 mouse_genomes_project 3 94175366 94197476 - MGP_CBAJ_P0061101 Pear1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061102.1 MGP_CBAJ_G0027058.1 mouse_genomes_project 3 94175366 94197470 - MGP_CBAJ_P0061102 Pear1 protein_coding protein_coding MGP_CBAJ_T0061103.1 MGP_CBAJ_G0027058.1 mouse_genomes_project 3 94175374 94180581 - Pear1 protein_coding retained_intron MGP_CBAJ_T0061104.1 MGP_CBAJ_G0027058.1 mouse_genomes_project 3 94176168 94197470 - MGP_CBAJ_P0061104 Pear1 protein_coding protein_coding MGP_CBAJ_T0061105.1 MGP_CBAJ_G0027058.1 mouse_genomes_project 3 94177727 94180210 - MGP_CBAJ_P0061105 Pear1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061106.1 MGP_CBAJ_G0027058.1 mouse_genomes_project 3 94178708 94183202 - MGP_CBAJ_P0061106 Pear1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061107.1 MGP_CBAJ_G0027058.1 mouse_genomes_project 3 94182900 94197470 - MGP_CBAJ_P0061107 Pear1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061108.1 MGP_CBAJ_G0027058.1 mouse_genomes_project 3 94184221 94197482 - Pear1 protein_coding retained_intron MGP_CBAJ_T0061109.1 MGP_CBAJ_G0027058.1 mouse_genomes_project 3 94184661 94197470 - MGP_CBAJ_P0061109 Pear1 protein_coding protein_coding MGP_CBAJ_T0061110.1 MGP_CBAJ_G0027058.1 mouse_genomes_project 3 94184674 94197470 - MGP_CBAJ_P0061110 Pear1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061111.1 MGP_CBAJ_G0027058.1 mouse_genomes_project 3 94184688 94197493 - MGP_CBAJ_P0061111 Pear1 protein_coding protein_coding MGP_CBAJ_T0061112.1 MGP_CBAJ_G0027058.1 mouse_genomes_project 3 94185368 94197462 - MGP_CBAJ_P0061112 Pear1 protein_coding protein_coding MGP_CBAJ_T0099193.1 MGP_CBAJ_G0037448.1 mouse_genomes_project 3 97118911 97119016 + Gm24185 snRNA snRNA MGP_CBAJ_T0001241.1 MGP_CBAJ_G0001168.1 mouse_genomes_project 3 113728298 113735166 + TEC TEC MGP_CBAJ_T0013848.1 MGP_CBAJ_G0011960.1 mouse_genomes_project 3 52040956 52041278 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101865.1 MGP_CBAJ_G0039896.1 mouse_genomes_project 3 101799262 101799600 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0098326.1 MGP_CBAJ_G0036592.1 mouse_genomes_project 3 102206570 102207448 - Gm43774 sense_intronic sense_intronic MGP_CBAJ_T0010385.1 MGP_CBAJ_G0008523.1 mouse_genomes_project 3 36894462 36894526 - Mir7009 miRNA miRNA MGP_CBAJ_T0100451.1 MGP_CBAJ_G0038706.1 mouse_genomes_project 3 67873862 67874020 - Gm23897 snoRNA snoRNA MGP_CBAJ_T0059936.1 MGP_CBAJ_G0026815.1 mouse_genomes_project 3 30357949 30385499 - MGP_CBAJ_P0059936 Lrrc34 protein_coding protein_coding MGP_CBAJ_T0013733.1 MGP_CBAJ_G0011845.1 mouse_genomes_project 3 8760628 8760817 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014048.1 MGP_CBAJ_G0012160.1 mouse_genomes_project 3 117207650 117208266 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0060361.1 MGP_CBAJ_G0026888.1 mouse_genomes_project 3 53496706 53501000 - MGP_CBAJ_P0060361 Ndufc1 protein_coding protein_coding MGP_CBAJ_T0060362.1 MGP_CBAJ_G0026888.1 mouse_genomes_project 3 53497486 53499493 - Ndufc1 protein_coding retained_intron MGP_CBAJ_T0060363.1 MGP_CBAJ_G0026888.1 mouse_genomes_project 3 53497509 53500678 - Ndufc1 protein_coding processed_transcript MGP_CBAJ_T0060364.1 MGP_CBAJ_G0026888.1 mouse_genomes_project 3 53497613 53500976 - MGP_CBAJ_P0060364 Ndufc1 protein_coding protein_coding MGP_CBAJ_T0099151.1 MGP_CBAJ_G0037406.1 mouse_genomes_project 3 16691384 16691548 - Gm23686 snRNA snRNA MGP_CBAJ_T0007399.1 MGP_CBAJ_G0006057.1 mouse_genomes_project 3 34864615 34888627 - Gm3143 lincRNA lincRNA MGP_CBAJ_T0007400.1 MGP_CBAJ_G0006057.1 mouse_genomes_project 3 34877514 34888629 - Gm3143 lincRNA lincRNA MGP_CBAJ_T0001345.1 MGP_CBAJ_G0001271.1 mouse_genomes_project 3 167828302 167829287 + TEC TEC MGP_CBAJ_T0007538.1 MGP_CBAJ_G0006160.1 mouse_genomes_project 3 109163424 109182413 + lincRNA lincRNA MGP_CBAJ_T0013874.1 MGP_CBAJ_G0011986.1 mouse_genomes_project 3 60828381 60829560 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098497.1 MGP_CBAJ_G0036753.1 mouse_genomes_project 3 159289810 159290845 + D530037P16Rik sense_overlapping sense_overlapping MGP_CBAJ_T0062186.1 MGP_CBAJ_G0027303.1 mouse_genomes_project 3 104769199 104773057 + MGP_CBAJ_P0062186 Rbm8a protein_coding protein_coding MGP_CBAJ_T0062187.1 MGP_CBAJ_G0027303.1 mouse_genomes_project 3 104769206 104773057 + MGP_CBAJ_P0062187 Rbm8a protein_coding protein_coding MGP_CBAJ_T0062188.1 MGP_CBAJ_G0027303.1 mouse_genomes_project 3 104769228 104772176 + MGP_CBAJ_P0062188 Rbm8a protein_coding protein_coding MGP_CBAJ_T0062189.1 MGP_CBAJ_G0027303.1 mouse_genomes_project 3 104769239 104769821 + Rbm8a protein_coding retained_intron MGP_CBAJ_T0062190.1 MGP_CBAJ_G0027303.1 mouse_genomes_project 3 104770488 104771168 + Rbm8a protein_coding retained_intron MGP_CBAJ_T0101849.1 MGP_CBAJ_G0039880.1 mouse_genomes_project 3 68305414 68306311 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0062762.1 MGP_CBAJ_G0027441.1 mouse_genomes_project 3 117567281 117578775 - Ampd2 protein_coding retained_intron MGP_CBAJ_T0062763.1 MGP_CBAJ_G0027441.1 mouse_genomes_project 3 117567281 117579847 - MGP_CBAJ_P0062763 Ampd2 protein_coding protein_coding MGP_CBAJ_T0062764.1 MGP_CBAJ_G0027441.1 mouse_genomes_project 3 117567283 117579871 - MGP_CBAJ_P0062764 Ampd2 protein_coding protein_coding MGP_CBAJ_T0062765.1 MGP_CBAJ_G0027441.1 mouse_genomes_project 3 117567306 117578619 - MGP_CBAJ_P0062765 Ampd2 protein_coding protein_coding MGP_CBAJ_T0062766.1 MGP_CBAJ_G0027441.1 mouse_genomes_project 3 117567963 117568690 - Ampd2 protein_coding retained_intron MGP_CBAJ_T0062767.1 MGP_CBAJ_G0027441.1 mouse_genomes_project 3 117568583 117569652 - Ampd2 protein_coding retained_intron MGP_CBAJ_T0062768.1 MGP_CBAJ_G0027441.1 mouse_genomes_project 3 117569832 117571115 - Ampd2 protein_coding retained_intron MGP_CBAJ_T0062769.1 MGP_CBAJ_G0027441.1 mouse_genomes_project 3 117571687 117572929 - Ampd2 protein_coding retained_intron MGP_CBAJ_T0062770.1 MGP_CBAJ_G0027441.1 mouse_genomes_project 3 117571851 117573838 - Ampd2 protein_coding retained_intron MGP_CBAJ_T0062771.1 MGP_CBAJ_G0027441.1 mouse_genomes_project 3 117573141 117578615 - Ampd2 protein_coding retained_intron MGP_CBAJ_T0013923.1 MGP_CBAJ_G0012035.1 mouse_genomes_project 3 74555830 74556389 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014058.1 MGP_CBAJ_G0012170.1 mouse_genomes_project 3 119640846 119641330 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099187.1 MGP_CBAJ_G0037442.1 mouse_genomes_project 3 93256467 93256627 + Gm23376 snRNA snRNA MGP_CBAJ_T0098038.1 MGP_CBAJ_G0036311.1 mouse_genomes_project 3 139515801 139515887 + Gm23279 rRNA rRNA MGP_CBAJ_T0001084.1 MGP_CBAJ_G0001013.1 mouse_genomes_project 3 21806360 21806611 + TEC TEC MGP_CBAJ_T0098333.1 MGP_CBAJ_G0036599.1 mouse_genomes_project 3 109091058 109093179 - Gm42869 sense_intronic sense_intronic MGP_CBAJ_T0013906.1 MGP_CBAJ_G0012018.1 mouse_genomes_project 3 70689086 70689408 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063322.1 MGP_CBAJ_G0027546.1 mouse_genomes_project 3 141553989 141659614 + MGP_CBAJ_P0063322 Elovl6 protein_coding protein_coding MGP_CBAJ_T0063323.1 MGP_CBAJ_G0027546.1 mouse_genomes_project 3 141554036 141654694 + MGP_CBAJ_P0063323 Elovl6 protein_coding protein_coding MGP_CBAJ_T0063324.1 MGP_CBAJ_G0027546.1 mouse_genomes_project 3 141573725 141649451 + MGP_CBAJ_P0063324 Elovl6 protein_coding protein_coding MGP_CBAJ_T0010375.1 MGP_CBAJ_G0008513.1 mouse_genomes_project 3 26339083 26339218 - Gm44464 miRNA miRNA MGP_CBAJ_T0061818.1 MGP_CBAJ_G0027232.1 mouse_genomes_project 3 102089275 102091531 - protein_coding retained_intron MGP_CBAJ_T0061819.1 MGP_CBAJ_G0027232.1 mouse_genomes_project 3 102090032 102093484 - MGP_CBAJ_P0061819 protein_coding protein_coding MGP_CBAJ_T0061820.1 MGP_CBAJ_G0027232.1 mouse_genomes_project 3 102090253 102100664 - MGP_CBAJ_P0061820 protein_coding protein_coding MGP_CBAJ_T0061821.1 MGP_CBAJ_G0027232.1 mouse_genomes_project 3 102090253 102100582 - MGP_CBAJ_P0061821 protein_coding protein_coding MGP_CBAJ_T0061822.1 MGP_CBAJ_G0027232.1 mouse_genomes_project 3 102090253 102091980 - MGP_CBAJ_P0061822 protein_coding protein_coding MGP_CBAJ_T0061823.1 MGP_CBAJ_G0027232.1 mouse_genomes_project 3 102090253 102093435 - MGP_CBAJ_P0061823 protein_coding protein_coding MGP_CBAJ_T0061824.1 MGP_CBAJ_G0027232.1 mouse_genomes_project 3 102090253 102093505 - MGP_CBAJ_P0061824 protein_coding protein_coding MGP_CBAJ_T0061825.1 MGP_CBAJ_G0027232.1 mouse_genomes_project 3 102091978 102093631 - protein_coding retained_intron MGP_CBAJ_T0061010.1 MGP_CBAJ_G0027037.1 mouse_genomes_project 3 90611476 90614935 + MGP_CBAJ_P0061010 Tigd4 protein_coding protein_coding MGP_CBAJ_T0062546.1 MGP_CBAJ_G0027383.1 mouse_genomes_project 3 113373870 113453056 - MGP_CBAJ_P0062546 Lrig2 protein_coding protein_coding MGP_CBAJ_T0062547.1 MGP_CBAJ_G0027383.1 mouse_genomes_project 3 113445542 113509638 - MGP_CBAJ_P0062547 Lrig2 protein_coding protein_coding MGP_CBAJ_T0062548.1 MGP_CBAJ_G0027383.1 mouse_genomes_project 3 113445543 113509626 - MGP_CBAJ_P0062548 Lrig2 protein_coding protein_coding MGP_CBAJ_T0062549.1 MGP_CBAJ_G0027383.1 mouse_genomes_project 3 113448116 113472847 - Lrig2 protein_coding retained_intron MGP_CBAJ_T0062550.1 MGP_CBAJ_G0027383.1 mouse_genomes_project 3 113448674 113509654 - MGP_CBAJ_P0062550 Lrig2 protein_coding protein_coding MGP_CBAJ_T0062551.1 MGP_CBAJ_G0027383.1 mouse_genomes_project 3 113448890 113509716 - Lrig2 protein_coding retained_intron MGP_CBAJ_T0062552.1 MGP_CBAJ_G0027383.1 mouse_genomes_project 3 113450751 113454354 - Lrig2 protein_coding retained_intron MGP_CBAJ_T0062553.1 MGP_CBAJ_G0027383.1 mouse_genomes_project 3 113474248 113509459 - Lrig2 protein_coding retained_intron MGP_CBAJ_T0062554.1 MGP_CBAJ_G0027383.1 mouse_genomes_project 3 113486005 113487043 - Lrig2 protein_coding retained_intron MGP_CBAJ_T0061873.1 MGP_CBAJ_G0027241.1 mouse_genomes_project 3 102670445 102673314 - MGP_CBAJ_P0061873 Psmb4 protein_coding protein_coding MGP_CBAJ_T0061874.1 MGP_CBAJ_G0027241.1 mouse_genomes_project 3 102670674 102671196 - Psmb4 protein_coding retained_intron MGP_CBAJ_T0061875.1 MGP_CBAJ_G0027241.1 mouse_genomes_project 3 102671250 102673215 - Psmb4 protein_coding retained_intron MGP_CBAJ_T0061876.1 MGP_CBAJ_G0027241.1 mouse_genomes_project 3 102671269 102673098 - Psmb4 protein_coding retained_intron MGP_CBAJ_T0061877.1 MGP_CBAJ_G0027241.1 mouse_genomes_project 3 102671659 102672308 - Psmb4 protein_coding retained_intron MGP_CBAJ_T0014009.1 MGP_CBAJ_G0012121.1 mouse_genomes_project 3 104561022 104565953 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004134.1 MGP_CBAJ_G0003640.1 mouse_genomes_project 3 31105508 31141670 + Gm15496 antisense antisense MGP_CBAJ_T0004135.1 MGP_CBAJ_G0003640.1 mouse_genomes_project 3 31133418 31139785 + Gm15496 antisense antisense MGP_CBAJ_T0014046.1 MGP_CBAJ_G0012158.1 mouse_genomes_project 3 115253251 115253567 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0063544.1 MGP_CBAJ_G0027588.1 mouse_genomes_project 3 148692907 149001165 - MGP_CBAJ_P0063544 Bank1 protein_coding protein_coding MGP_CBAJ_T0063545.1 MGP_CBAJ_G0027588.1 mouse_genomes_project 3 148692907 149001145 - MGP_CBAJ_P0063545 Bank1 protein_coding protein_coding MGP_CBAJ_T0063546.1 MGP_CBAJ_G0027588.1 mouse_genomes_project 3 148692993 149001124 - MGP_CBAJ_P0063546 Bank1 protein_coding protein_coding MGP_CBAJ_T0063547.1 MGP_CBAJ_G0027588.1 mouse_genomes_project 3 148693466 148694261 - Bank1 protein_coding retained_intron MGP_CBAJ_T0063548.1 MGP_CBAJ_G0027588.1 mouse_genomes_project 3 148693481 148695648 - Bank1 protein_coding retained_intron MGP_CBAJ_T0063549.1 MGP_CBAJ_G0027588.1 mouse_genomes_project 3 148863685 148903318 - Bank1 protein_coding retained_intron MGP_CBAJ_T0007668.1 MGP_CBAJ_G0006265.1 mouse_genomes_project 3 165126713 165132215 + Gm43470 lincRNA lincRNA MGP_CBAJ_T0007669.1 MGP_CBAJ_G0006265.1 mouse_genomes_project 3 165126792 165151902 + Gm43470 lincRNA lincRNA MGP_CBAJ_T0062856.1 MGP_CBAJ_G0027461.1 mouse_genomes_project 3 118259436 118302737 - MGP_CBAJ_P0062856 Gpsm2 protein_coding protein_coding MGP_CBAJ_T0062857.1 MGP_CBAJ_G0027461.1 mouse_genomes_project 3 118281876 118282966 - Gpsm2 protein_coding retained_intron MGP_CBAJ_T0062858.1 MGP_CBAJ_G0027461.1 mouse_genomes_project 3 118282292 118292105 - MGP_CBAJ_P0062858 Gpsm2 protein_coding protein_coding MGP_CBAJ_T0062859.1 MGP_CBAJ_G0027461.1 mouse_genomes_project 3 118283428 118302544 - Gpsm2 protein_coding processed_transcript MGP_CBAJ_T0017751.1 MGP_CBAJ_G0015267.1 mouse_genomes_project 3 134774301 134775155 - Snhg8 processed_transcript lincRNA MGP_CBAJ_T0017752.1 MGP_CBAJ_G0015267.1 mouse_genomes_project 3 134774304 134775081 - Snhg8 processed_transcript retained_intron MGP_CBAJ_T0017753.1 MGP_CBAJ_G0015267.1 mouse_genomes_project 3 134774306 134775084 - Snhg8 processed_transcript lincRNA MGP_CBAJ_T0060224.1 MGP_CBAJ_G0026866.1 mouse_genomes_project 3 38234035 38240143 - protein_coding processed_transcript MGP_CBAJ_T0061270.1 MGP_CBAJ_G0027092.1 mouse_genomes_project 3 95214957 95224551 + MGP_CBAJ_P0061270 Ssr2 protein_coding protein_coding MGP_CBAJ_T0061271.1 MGP_CBAJ_G0027092.1 mouse_genomes_project 3 95217489 95231624 + MGP_CBAJ_P0061271 Ssr2 protein_coding protein_coding MGP_CBAJ_T0061272.1 MGP_CBAJ_G0027092.1 mouse_genomes_project 3 95224163 95235931 + MGP_CBAJ_P0061272 Ssr2 protein_coding protein_coding MGP_CBAJ_T0061273.1 MGP_CBAJ_G0027092.1 mouse_genomes_project 3 95224196 95235531 + MGP_CBAJ_P0061273 Ssr2 protein_coding protein_coding MGP_CBAJ_T0061274.1 MGP_CBAJ_G0027092.1 mouse_genomes_project 3 95224222 95235545 + MGP_CBAJ_P0061274 Ssr2 protein_coding protein_coding MGP_CBAJ_T0061275.1 MGP_CBAJ_G0027092.1 mouse_genomes_project 3 95224226 95235931 + MGP_CBAJ_P0061275 Ssr2 protein_coding protein_coding MGP_CBAJ_T0001356.1 MGP_CBAJ_G0001282.1 mouse_genomes_project 3 172400016 172401581 + TEC TEC MGP_CBAJ_T0004138.1 MGP_CBAJ_G0003643.1 mouse_genomes_project 3 32959721 33013844 + Gm37459 antisense antisense MGP_CBAJ_T0063431.1 MGP_CBAJ_G0027569.1 mouse_genomes_project 3 144951723 145122990 + MGP_CBAJ_P0063431 Tbck protein_coding protein_coding MGP_CBAJ_T0063432.1 MGP_CBAJ_G0027569.1 mouse_genomes_project 3 144951747 144967823 + Tbck protein_coding retained_intron MGP_CBAJ_T0063433.1 MGP_CBAJ_G0027569.1 mouse_genomes_project 3 144951779 145079988 + Tbck protein_coding processed_transcript MGP_CBAJ_T0063434.1 MGP_CBAJ_G0027569.1 mouse_genomes_project 3 145070063 145117153 + Tbck protein_coding processed_transcript MGP_CBAJ_T0014135.1 MGP_CBAJ_G0012247.1 mouse_genomes_project 3 147706651 147707327 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001122.1 MGP_CBAJ_G0001051.1 mouse_genomes_project 3 39007752 39008933 - TEC TEC MGP_CBAJ_T0060769.1 MGP_CBAJ_G0026980.1 mouse_genomes_project 3 72820185 72822535 - MGP_CBAJ_P0060769 Gm17641 protein_coding protein_coding MGP_CBAJ_T0099203.1 MGP_CBAJ_G0037458.1 mouse_genomes_project 3 104560449 104569584 + Gm22614 snRNA snRNA MGP_CBAJ_T0013813.1 MGP_CBAJ_G0011925.1 mouse_genomes_project 3 38506059 38506535 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0061486.1 MGP_CBAJ_G0027123.1 mouse_genomes_project 3 96144446 96156755 + MGP_CBAJ_P0061486 unknown_likely_coding unknown_likely_coding MGP_CBAJ_T0062558.1 MGP_CBAJ_G0027386.1 mouse_genomes_project 3 113815339 113820301 + MGP_CBAJ_P0062558 Ppm1j protein_coding protein_coding MGP_CBAJ_T0062559.1 MGP_CBAJ_G0027386.1 mouse_genomes_project 3 113819891 113820301 + Ppm1j protein_coding retained_intron MGP_CBAJ_T0014168.1 MGP_CBAJ_G0012280.1 mouse_genomes_project 3 158373512 158374037 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061183.1 MGP_CBAJ_G0027077.1 mouse_genomes_project 3 94767340 94811023 - MGP_CBAJ_P0061183 Gm38392 protein_coding protein_coding MGP_CBAJ_T0061184.1 MGP_CBAJ_G0027077.1 mouse_genomes_project 3 94769155 94811023 - MGP_CBAJ_P0061184 Gm38392 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063799.1 MGP_CBAJ_G0027642.1 mouse_genomes_project 3 160008924 160088749 - MGP_CBAJ_P0063799 Wdr63 protein_coding protein_coding MGP_CBAJ_T0063800.1 MGP_CBAJ_G0027642.1 mouse_genomes_project 3 160008926 160015613 - Wdr63 protein_coding processed_transcript MGP_CBAJ_T0063801.1 MGP_CBAJ_G0027642.1 mouse_genomes_project 3 160011173 160016865 - Wdr63 protein_coding processed_transcript MGP_CBAJ_T0001263.1 MGP_CBAJ_G0001190.1 mouse_genomes_project 3 132426701 132430054 - TEC TEC MGP_CBAJ_T0001292.1 MGP_CBAJ_G0001219.1 mouse_genomes_project 3 138789346 138791867 - TEC TEC MGP_CBAJ_T0013702.1 MGP_CBAJ_G0011814.1 mouse_genomes_project 3 1133 1884 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062163.1 MGP_CBAJ_G0027290.1 mouse_genomes_project 3 104266162 104270257 - MGP_CBAJ_P0062163 Hist2h2ac protein_coding protein_coding MGP_CBAJ_T0060343.1 MGP_CBAJ_G0026886.1 mouse_genomes_project 3 53321025 53420596 - MGP_CBAJ_P0060343 Elf2 protein_coding protein_coding MGP_CBAJ_T0060344.1 MGP_CBAJ_G0026886.1 mouse_genomes_project 3 53323544 53400380 - MGP_CBAJ_P0060344 Elf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060345.1 MGP_CBAJ_G0026886.1 mouse_genomes_project 3 53323545 53420577 - MGP_CBAJ_P0060345 Elf2 protein_coding protein_coding MGP_CBAJ_T0060346.1 MGP_CBAJ_G0026886.1 mouse_genomes_project 3 53323977 53345991 - MGP_CBAJ_P0060346 Elf2 protein_coding protein_coding MGP_CBAJ_T0060347.1 MGP_CBAJ_G0026886.1 mouse_genomes_project 3 53323979 53346151 - MGP_CBAJ_P0060347 Elf2 protein_coding protein_coding MGP_CBAJ_T0060348.1 MGP_CBAJ_G0026886.1 mouse_genomes_project 3 53323979 53346090 - MGP_CBAJ_P0060348 Elf2 protein_coding protein_coding MGP_CBAJ_T0060349.1 MGP_CBAJ_G0026886.1 mouse_genomes_project 3 53323999 53400338 - MGP_CBAJ_P0060349 Elf2 protein_coding protein_coding MGP_CBAJ_T0060350.1 MGP_CBAJ_G0026886.1 mouse_genomes_project 3 53326997 53328553 - Elf2 protein_coding retained_intron MGP_CBAJ_T0060351.1 MGP_CBAJ_G0026886.1 mouse_genomes_project 3 53333152 53420591 - MGP_CBAJ_P0060351 Elf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060352.1 MGP_CBAJ_G0026886.1 mouse_genomes_project 3 53333152 53345944 - MGP_CBAJ_P0060352 Elf2 protein_coding protein_coding MGP_CBAJ_T0060353.1 MGP_CBAJ_G0026886.1 mouse_genomes_project 3 53333168 53420494 - Elf2 protein_coding processed_transcript MGP_CBAJ_T0060354.1 MGP_CBAJ_G0026886.1 mouse_genomes_project 3 53333168 53346000 - MGP_CBAJ_P0060354 Elf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060355.1 MGP_CBAJ_G0026886.1 mouse_genomes_project 3 53333332 53346020 - MGP_CBAJ_P0060355 Elf2 protein_coding protein_coding MGP_CBAJ_T0061652.1 MGP_CBAJ_G0027151.1 mouse_genomes_project 3 97231874 97302790 + MGP_CBAJ_P0061652 Gatad2b protein_coding protein_coding MGP_CBAJ_T0061653.1 MGP_CBAJ_G0027151.1 mouse_genomes_project 3 97231880 97290980 + Gatad2b protein_coding retained_intron MGP_CBAJ_T0061654.1 MGP_CBAJ_G0027151.1 mouse_genomes_project 3 97231995 97296541 + Gatad2b protein_coding retained_intron MGP_CBAJ_T0061655.1 MGP_CBAJ_G0027151.1 mouse_genomes_project 3 97232729 97296801 + MGP_CBAJ_P0061655 Gatad2b protein_coding protein_coding MGP_CBAJ_T0061656.1 MGP_CBAJ_G0027151.1 mouse_genomes_project 3 97279850 97283505 + Gatad2b protein_coding retained_intron MGP_CBAJ_T0061657.1 MGP_CBAJ_G0027151.1 mouse_genomes_project 3 97280475 97296548 + MGP_CBAJ_P0061657 Gatad2b protein_coding protein_coding MGP_CBAJ_T0061658.1 MGP_CBAJ_G0027151.1 mouse_genomes_project 3 97280477 97296507 + MGP_CBAJ_P0061658 Gatad2b protein_coding protein_coding MGP_CBAJ_T0061659.1 MGP_CBAJ_G0027151.1 mouse_genomes_project 3 97289845 97294562 + MGP_CBAJ_P0061659 Gatad2b protein_coding protein_coding MGP_CBAJ_T0061751.1 MGP_CBAJ_G0027189.1 mouse_genomes_project 3 99801086 99801317 - MGP_CBAJ_P0061751 Sprr4 protein_coding protein_coding MGP_CBAJ_T0098371.1 MGP_CBAJ_G0036637.1 mouse_genomes_project 3 114848870 114850304 - Gm43328 sense_intronic sense_intronic MGP_CBAJ_T0001239.1 MGP_CBAJ_G0001166.1 mouse_genomes_project 3 106440428 106443491 + TEC TEC MGP_CBAJ_T0061276.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95254768 95261936 + Arhgef2 protein_coding processed_transcript MGP_CBAJ_T0061277.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95254973 95264702 + Arhgef2 protein_coding processed_transcript MGP_CBAJ_T0061278.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95255105 95294246 + MGP_CBAJ_P0061278 Arhgef2 protein_coding protein_coding MGP_CBAJ_T0061279.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95261779 95264864 + Arhgef2 protein_coding processed_transcript MGP_CBAJ_T0061280.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95261967 95280926 + MGP_CBAJ_P0061280 Arhgef2 protein_coding protein_coding MGP_CBAJ_T0061281.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95262725 95281830 + MGP_CBAJ_P0061281 Arhgef2 protein_coding protein_coding MGP_CBAJ_T0061282.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95263505 95295373 + MGP_CBAJ_P0061282 Arhgef2 protein_coding protein_coding MGP_CBAJ_T0061283.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95263505 95294849 + MGP_CBAJ_P0061283 Arhgef2 protein_coding protein_coding MGP_CBAJ_T0061284.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95263879 95294212 + MGP_CBAJ_P0061284 Arhgef2 protein_coding protein_coding MGP_CBAJ_T0061285.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95268499 95294180 + MGP_CBAJ_P0061285 Arhgef2 protein_coding protein_coding MGP_CBAJ_T0061286.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95268512 95286870 + Arhgef2 protein_coding retained_intron MGP_CBAJ_T0061287.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95268633 95296856 + MGP_CBAJ_P0061287 Arhgef2 protein_coding protein_coding MGP_CBAJ_T0061288.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95268666 95295371 + MGP_CBAJ_P0061288 Arhgef2 protein_coding protein_coding MGP_CBAJ_T0061289.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95268834 95281793 + Arhgef2 protein_coding retained_intron MGP_CBAJ_T0061290.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95268922 95280391 + Arhgef2 protein_coding retained_intron MGP_CBAJ_T0061291.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95269833 95280257 + MGP_CBAJ_P0061291 Arhgef2 protein_coding protein_coding MGP_CBAJ_T0061292.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95270232 95288042 + MGP_CBAJ_P0061292 Arhgef2 protein_coding protein_coding MGP_CBAJ_T0061293.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95270675 95280948 + MGP_CBAJ_P0061293 Arhgef2 protein_coding protein_coding MGP_CBAJ_T0061294.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95276777 95280307 + MGP_CBAJ_P0061294 Arhgef2 protein_coding protein_coding MGP_CBAJ_T0061295.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95276804 95279432 + Arhgef2 protein_coding retained_intron MGP_CBAJ_T0061296.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95276808 95280323 + MGP_CBAJ_P0061296 Arhgef2 protein_coding protein_coding MGP_CBAJ_T0061297.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95276906 95279665 + MGP_CBAJ_P0061297 Arhgef2 protein_coding protein_coding MGP_CBAJ_T0061298.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95279241 95281993 + Arhgef2 protein_coding processed_transcript MGP_CBAJ_T0061299.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95279526 95280921 + Arhgef2 protein_coding retained_intron MGP_CBAJ_T0061300.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95280063 95280969 + Arhgef2 protein_coding retained_intron MGP_CBAJ_T0061301.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95280248 95285146 + Arhgef2 protein_coding retained_intron MGP_CBAJ_T0061302.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95281653 95282407 + Arhgef2 protein_coding retained_intron MGP_CBAJ_T0061303.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95289730 95291217 + Arhgef2 protein_coding retained_intron MGP_CBAJ_T0061304.1 MGP_CBAJ_G0027093.1 mouse_genomes_project 3 95291236 95294282 + Arhgef2 protein_coding processed_transcript MGP_CBAJ_T0001204.1 MGP_CBAJ_G0001131.1 mouse_genomes_project 3 77768616 77770741 + TEC TEC MGP_CBAJ_T0013950.1 MGP_CBAJ_G0012062.1 mouse_genomes_project 3 85028773 85029420 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004310.1 MGP_CBAJ_G0003758.1 mouse_genomes_project 3 155023578 155045536 - Gm15689 antisense antisense MGP_CBAJ_T0001205.1 MGP_CBAJ_G0001132.1 mouse_genomes_project 3 79878059 79880279 - TEC TEC MGP_CBAJ_T0062327.1 MGP_CBAJ_G0027339.1 mouse_genomes_project 3 107705661 107780454 + MGP_CBAJ_P0062327 Tbx15 protein_coding protein_coding MGP_CBAJ_T0062328.1 MGP_CBAJ_G0027339.1 mouse_genomes_project 3 107718965 107821667 + MGP_CBAJ_P0062328 Tbx15 protein_coding protein_coding MGP_CBAJ_T0062329.1 MGP_CBAJ_G0027339.1 mouse_genomes_project 3 107763866 107783629 + MGP_CBAJ_P0062329 Tbx15 protein_coding protein_coding MGP_CBAJ_T0014030.1 MGP_CBAJ_G0012142.1 mouse_genomes_project 3 111127822 111128290 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001123.1 MGP_CBAJ_G0001052.1 mouse_genomes_project 3 40337854 40340834 + TEC TEC MGP_CBAJ_T0061947.1 MGP_CBAJ_G0027252.1 mouse_genomes_project 3 103001046 103006849 + MGP_CBAJ_P0061947 protein_coding protein_coding MGP_CBAJ_T0099177.1 MGP_CBAJ_G0037432.1 mouse_genomes_project 3 72472158 72472347 - Gm22073 snRNA snRNA MGP_CBAJ_T0063788.1 MGP_CBAJ_G0027640.1 mouse_genomes_project 3 159885174 159891991 + MGP_CBAJ_P0063788 2410004B18Rik protein_coding protein_coding MGP_CBAJ_T0063789.1 MGP_CBAJ_G0027640.1 mouse_genomes_project 3 159885202 159891989 + MGP_CBAJ_P0063789 2410004B18Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0063790.1 MGP_CBAJ_G0027640.1 mouse_genomes_project 3 159885350 159890972 + MGP_CBAJ_P0063790 2410004B18Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0063791.1 MGP_CBAJ_G0027640.1 mouse_genomes_project 3 159885396 159885948 + 2410004B18Rik protein_coding retained_intron MGP_CBAJ_T0063792.1 MGP_CBAJ_G0027640.1 mouse_genomes_project 3 159885445 159891404 + MGP_CBAJ_P0063792 2410004B18Rik protein_coding protein_coding MGP_CBAJ_T0063793.1 MGP_CBAJ_G0027640.1 mouse_genomes_project 3 159885804 159891015 + 2410004B18Rik protein_coding retained_intron MGP_CBAJ_T0063794.1 MGP_CBAJ_G0027640.1 mouse_genomes_project 3 159886246 159891360 + MGP_CBAJ_P0063794 2410004B18Rik protein_coding protein_coding MGP_CBAJ_T0063487.1 MGP_CBAJ_G0027580.1 mouse_genomes_project 3 147859104 147893947 + MGP_CBAJ_P0063487 Slc9b2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063488.1 MGP_CBAJ_G0027580.1 mouse_genomes_project 3 147859135 147876245 + Slc9b2 protein_coding retained_intron MGP_CBAJ_T0063489.1 MGP_CBAJ_G0027580.1 mouse_genomes_project 3 147859146 147869777 + MGP_CBAJ_P0063489 Slc9b2 protein_coding protein_coding MGP_CBAJ_T0063490.1 MGP_CBAJ_G0027580.1 mouse_genomes_project 3 147859149 147896621 + MGP_CBAJ_P0063490 Slc9b2 protein_coding protein_coding MGP_CBAJ_T0063491.1 MGP_CBAJ_G0027580.1 mouse_genomes_project 3 147881717 147894179 + Slc9b2 protein_coding retained_intron MGP_CBAJ_T0099197.1 MGP_CBAJ_G0037452.1 mouse_genomes_project 3 102960839 102960946 + Gm22301 snRNA snRNA MGP_CBAJ_T0014097.1 MGP_CBAJ_G0012209.1 mouse_genomes_project 3 133824947 133825455 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062305.1 MGP_CBAJ_G0027331.1 mouse_genomes_project 3 106733478 107174459 + Zfp697 protein_coding processed_transcript MGP_CBAJ_T0062306.1 MGP_CBAJ_G0027331.1 mouse_genomes_project 3 106733498 106769026 + MGP_CBAJ_P0062306 Zfp697 protein_coding protein_coding MGP_CBAJ_T0062307.1 MGP_CBAJ_G0027331.1 mouse_genomes_project 3 106733565 106769043 + MGP_CBAJ_P0062307 Zfp697 protein_coding protein_coding MGP_CBAJ_T0101313.1 MGP_CBAJ_G0039415.1 mouse_genomes_project 3 61752295 61755921 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101314.1 MGP_CBAJ_G0039415.1 mouse_genomes_project 3 61754030 61776668 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0098033.1 MGP_CBAJ_G0036306.1 mouse_genomes_project 3 40337759 40337878 - n-R5s195 rRNA rRNA MGP_CBAJ_T0059764.1 MGP_CBAJ_G0026784.1 mouse_genomes_project 3 18159314 18265673 + MGP_CBAJ_P0059764 Dnajc5b protein_coding protein_coding MGP_CBAJ_T0059765.1 MGP_CBAJ_G0026784.1 mouse_genomes_project 3 18159334 18265803 + MGP_CBAJ_P0059765 Dnajc5b protein_coding protein_coding MGP_CBAJ_T0059766.1 MGP_CBAJ_G0026784.1 mouse_genomes_project 3 18182719 18265691 + MGP_CBAJ_P0059766 Dnajc5b protein_coding protein_coding MGP_CBAJ_T0059767.1 MGP_CBAJ_G0026784.1 mouse_genomes_project 3 18183295 18265802 + MGP_CBAJ_P0059767 Dnajc5b protein_coding protein_coding MGP_CBAJ_T0007339.1 MGP_CBAJ_G0006014.1 mouse_genomes_project 3 1708355 1709619 + 1110015O18Rik lincRNA lincRNA MGP_CBAJ_T0007340.1 MGP_CBAJ_G0006014.1 mouse_genomes_project 3 1709505 1729366 + 1110015O18Rik lincRNA lincRNA MGP_CBAJ_T0007341.1 MGP_CBAJ_G0006014.1 mouse_genomes_project 3 1710290 1728430 + 1110015O18Rik lincRNA lincRNA MGP_CBAJ_T0013828.1 MGP_CBAJ_G0011940.1 mouse_genomes_project 3 44389962 44391126 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062322.1 MGP_CBAJ_G0027338.1 mouse_genomes_project 3 107592092 107677435 + MGP_CBAJ_P0062322 Wars2 protein_coding protein_coding MGP_CBAJ_T0062323.1 MGP_CBAJ_G0027338.1 mouse_genomes_project 3 107592134 107679731 + MGP_CBAJ_P0062323 Wars2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062324.1 MGP_CBAJ_G0027338.1 mouse_genomes_project 3 107592155 107699081 + MGP_CBAJ_P0062324 Wars2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062325.1 MGP_CBAJ_G0027338.1 mouse_genomes_project 3 107592158 107677129 + MGP_CBAJ_P0062325 Wars2 protein_coding protein_coding MGP_CBAJ_T0062326.1 MGP_CBAJ_G0027338.1 mouse_genomes_project 3 107592227 107660881 + Wars2 protein_coding retained_intron MGP_CBAJ_T0013826.1 MGP_CBAJ_G0011938.1 mouse_genomes_project 3 43465589 43466076 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004321.1 MGP_CBAJ_G0003767.1 mouse_genomes_project 3 167804267 167804897 + Gm16231 antisense antisense MGP_CBAJ_T0061169.1 MGP_CBAJ_G0027074.1 mouse_genomes_project 3 94569843 94618007 + MGP_CBAJ_P0061169 Iqgap3 protein_coding protein_coding MGP_CBAJ_T0061170.1 MGP_CBAJ_G0027074.1 mouse_genomes_project 3 94569892 94578522 + Iqgap3 protein_coding retained_intron MGP_CBAJ_T0061171.1 MGP_CBAJ_G0027074.1 mouse_genomes_project 3 94569900 94605365 + MGP_CBAJ_P0061171 Iqgap3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0061172.1 MGP_CBAJ_G0027074.1 mouse_genomes_project 3 94574021 94578515 + Iqgap3 protein_coding retained_intron MGP_CBAJ_T0061173.1 MGP_CBAJ_G0027074.1 mouse_genomes_project 3 94602116 94618003 + MGP_CBAJ_P0061173 Iqgap3 protein_coding protein_coding MGP_CBAJ_T0061174.1 MGP_CBAJ_G0027074.1 mouse_genomes_project 3 94604090 94609119 + Iqgap3 protein_coding retained_intron MGP_CBAJ_T0007645.1 MGP_CBAJ_G0006247.1 mouse_genomes_project 3 157328940 157417392 + Gm42705 lincRNA lincRNA MGP_CBAJ_T0061326.1 MGP_CBAJ_G0027098.1 mouse_genomes_project 3 95495368 95628830 + MGP_CBAJ_P0061326 protein_coding unknown_likely_coding MGP_CBAJ_T0061327.1 MGP_CBAJ_G0027098.1 mouse_genomes_project 3 95495368 95629461 + MGP_CBAJ_P0061327 protein_coding unknown_likely_coding MGP_CBAJ_T0014106.1 MGP_CBAJ_G0012218.1 mouse_genomes_project 3 135933755 135937152 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001193.1 MGP_CBAJ_G0001120.1 mouse_genomes_project 3 63816725 63820090 + TEC TEC MGP_CBAJ_T0062034.1 MGP_CBAJ_G0027268.1 mouse_genomes_project 3 103509944 103547402 + MGP_CBAJ_P0062034 Hormad1 protein_coding protein_coding MGP_CBAJ_T0062035.1 MGP_CBAJ_G0027268.1 mouse_genomes_project 3 103509945 103547403 + MGP_CBAJ_P0062035 Hormad1 protein_coding protein_coding MGP_CBAJ_T0062036.1 MGP_CBAJ_G0027268.1 mouse_genomes_project 3 103509945 103545678 + MGP_CBAJ_P0062036 Hormad1 protein_coding protein_coding MGP_CBAJ_T0062037.1 MGP_CBAJ_G0027268.1 mouse_genomes_project 3 103509945 103547322 + MGP_CBAJ_P0062037 Hormad1 protein_coding protein_coding MGP_CBAJ_T0061920.1 MGP_CBAJ_G0027247.1 mouse_genomes_project 3 102902461 102970465 - MGP_CBAJ_P0061920 Pip5k1a protein_coding protein_coding MGP_CBAJ_T0061921.1 MGP_CBAJ_G0027247.1 mouse_genomes_project 3 102902474 102970520 - MGP_CBAJ_P0061921 Pip5k1a protein_coding protein_coding MGP_CBAJ_T0061922.1 MGP_CBAJ_G0027247.1 mouse_genomes_project 3 102902476 102970446 - MGP_CBAJ_P0061922 Pip5k1a protein_coding protein_coding MGP_CBAJ_T0061923.1 MGP_CBAJ_G0027247.1 mouse_genomes_project 3 102902500 102970369 - MGP_CBAJ_P0061923 Pip5k1a protein_coding protein_coding MGP_CBAJ_T0061924.1 MGP_CBAJ_G0027247.1 mouse_genomes_project 3 102916276 102928885 - Pip5k1a protein_coding processed_transcript MGP_CBAJ_T0061925.1 MGP_CBAJ_G0027247.1 mouse_genomes_project 3 102928473 102933383 - Pip5k1a protein_coding retained_intron MGP_CBAJ_T0061926.1 MGP_CBAJ_G0027247.1 mouse_genomes_project 3 102958380 102970413 - Pip5k1a protein_coding processed_transcript MGP_CBAJ_T0061832.1 MGP_CBAJ_G0027235.1 mouse_genomes_project 3 102144330 102151240 + MGP_CBAJ_P0061832 Celf3 protein_coding protein_coding MGP_CBAJ_T0061833.1 MGP_CBAJ_G0027235.1 mouse_genomes_project 3 102144728 102158084 + MGP_CBAJ_P0061833 Celf3 protein_coding protein_coding MGP_CBAJ_T0061834.1 MGP_CBAJ_G0027235.1 mouse_genomes_project 3 102144975 102158085 + MGP_CBAJ_P0061834 Celf3 protein_coding protein_coding MGP_CBAJ_T0061835.1 MGP_CBAJ_G0027235.1 mouse_genomes_project 3 102145004 102155472 + MGP_CBAJ_P0061835 Celf3 protein_coding protein_coding MGP_CBAJ_T0061836.1 MGP_CBAJ_G0027235.1 mouse_genomes_project 3 102145014 102153489 + Celf3 protein_coding retained_intron MGP_CBAJ_T0061837.1 MGP_CBAJ_G0027235.1 mouse_genomes_project 3 102148472 102153132 + Celf3 protein_coding processed_transcript MGP_CBAJ_T0061838.1 MGP_CBAJ_G0027235.1 mouse_genomes_project 3 102148639 102158084 + Celf3 protein_coding processed_transcript MGP_CBAJ_T0061839.1 MGP_CBAJ_G0027235.1 mouse_genomes_project 3 102150248 102158084 + Celf3 protein_coding retained_intron MGP_CBAJ_T0061840.1 MGP_CBAJ_G0027235.1 mouse_genomes_project 3 102150285 102152860 + MGP_CBAJ_P0061840 Celf3 protein_coding protein_coding MGP_CBAJ_T0061841.1 MGP_CBAJ_G0027235.1 mouse_genomes_project 3 102150292 102153205 + MGP_CBAJ_P0061841 Celf3 protein_coding protein_coding MGP_CBAJ_T0061842.1 MGP_CBAJ_G0027235.1 mouse_genomes_project 3 102151198 102158073 + Celf3 protein_coding retained_intron MGP_CBAJ_T0061843.1 MGP_CBAJ_G0027235.1 mouse_genomes_project 3 102152566 102154532 + Celf3 protein_coding retained_intron MGP_CBAJ_T0061844.1 MGP_CBAJ_G0027235.1 mouse_genomes_project 3 102153122 102155481 + Celf3 protein_coding retained_intron MGP_CBAJ_T0062366.1 MGP_CBAJ_G0027349.1 mouse_genomes_project 3 109586602 109660248 - MGP_CBAJ_P0062366 Ptgfrn protein_coding protein_coding MGP_CBAJ_T0062367.1 MGP_CBAJ_G0027349.1 mouse_genomes_project 3 109609844 109622260 - Ptgfrn protein_coding processed_transcript MGP_CBAJ_T0062368.1 MGP_CBAJ_G0027349.1 mouse_genomes_project 3 109622746 109627532 - Ptgfrn protein_coding retained_intron MGP_CBAJ_T0060013.1 MGP_CBAJ_G0026832.1 mouse_genomes_project 3 32543338 32583339 - MGP_CBAJ_P0060013 Gnb4 protein_coding protein_coding MGP_CBAJ_T0060014.1 MGP_CBAJ_G0026832.1 mouse_genomes_project 3 32547003 32583279 - Gnb4 protein_coding retained_intron MGP_CBAJ_T0060015.1 MGP_CBAJ_G0026832.1 mouse_genomes_project 3 32547003 32583271 - MGP_CBAJ_P0060015 Gnb4 protein_coding protein_coding MGP_CBAJ_T0060016.1 MGP_CBAJ_G0026832.1 mouse_genomes_project 3 32548066 32583276 - MGP_CBAJ_P0060016 Gnb4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0060017.1 MGP_CBAJ_G0026832.1 mouse_genomes_project 3 32550733 32561208 - Gnb4 protein_coding retained_intron MGP_CBAJ_T0060018.1 MGP_CBAJ_G0026832.1 mouse_genomes_project 3 32554163 32583233 - MGP_CBAJ_P0060018 Gnb4 protein_coding protein_coding MGP_CBAJ_T0060019.1 MGP_CBAJ_G0026832.1 mouse_genomes_project 3 32555239 32583279 - Gnb4 protein_coding retained_intron MGP_CBAJ_T0060020.1 MGP_CBAJ_G0026832.1 mouse_genomes_project 3 32562864 32583283 - Gnb4 protein_coding retained_intron MGP_CBAJ_T0063741.1 MGP_CBAJ_G0027629.1 mouse_genomes_project 3 158377015 158453511 - MGP_CBAJ_P0063741 Clca3a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0063742.1 MGP_CBAJ_G0027629.1 mouse_genomes_project 3 158377254 158453375 - MGP_CBAJ_P0063742 Clca3a1 protein_coding protein_coding MGP_CBAJ_T0062319.1 MGP_CBAJ_G0027336.1 mouse_genomes_project 3 107294093 107303728 - MGP_CBAJ_P0062319 Hsd3b1 protein_coding protein_coding MGP_CBAJ_T0062320.1 MGP_CBAJ_G0027336.1 mouse_genomes_project 3 107294095 107303728 - MGP_CBAJ_P0062320 Hsd3b1 protein_coding protein_coding MGP_CBAJ_T0059959.1 MGP_CBAJ_G0026821.1 mouse_genomes_project 3 30673614 30744273 - MGP_CBAJ_P0059959 Phc3 protein_coding protein_coding MGP_CBAJ_T0059960.1 MGP_CBAJ_G0026821.1 mouse_genomes_project 3 30673767 30744277 - MGP_CBAJ_P0059960 Phc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059961.1 MGP_CBAJ_G0026821.1 mouse_genomes_project 3 30681027 30744277 - MGP_CBAJ_P0059961 Phc3 protein_coding protein_coding MGP_CBAJ_T0059962.1 MGP_CBAJ_G0026821.1 mouse_genomes_project 3 30681228 30744277 - MGP_CBAJ_P0059962 Phc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0059963.1 MGP_CBAJ_G0026821.1 mouse_genomes_project 3 30681554 30744271 - MGP_CBAJ_P0059963 Phc3 protein_coding protein_coding MGP_CBAJ_T0059964.1 MGP_CBAJ_G0026821.1 mouse_genomes_project 3 30681554 30744271 - MGP_CBAJ_P0059964 Phc3 protein_coding protein_coding MGP_CBAJ_T0059965.1 MGP_CBAJ_G0026821.1 mouse_genomes_project 3 30681554 30744271 - MGP_CBAJ_P0059965 Phc3 protein_coding protein_coding MGP_CBAJ_T0059966.1 MGP_CBAJ_G0026821.1 mouse_genomes_project 3 30681579 30740790 - MGP_CBAJ_P0059966 Phc3 protein_coding unknown_likely_coding MGP_CBAJ_T0059967.1 MGP_CBAJ_G0026821.1 mouse_genomes_project 3 30695414 30707502 - Phc3 protein_coding retained_intron MGP_CBAJ_T0059968.1 MGP_CBAJ_G0026821.1 mouse_genomes_project 3 30703506 30744287 - MGP_CBAJ_P0059968 Phc3 protein_coding protein_coding MGP_CBAJ_T0059969.1 MGP_CBAJ_G0026821.1 mouse_genomes_project 3 30733264 30740812 - Phc3 protein_coding retained_intron MGP_CBAJ_T0060750.1 MGP_CBAJ_G0026974.1 mouse_genomes_project 3 71283832 71328461 - MGP_CBAJ_P0060750 Rarres1 protein_coding protein_coding MGP_CBAJ_T0001081.1 MGP_CBAJ_G0001010.1 mouse_genomes_project 3 17761405 17762117 - TEC TEC MGP_CBAJ_T0061175.1 MGP_CBAJ_G0027075.1 mouse_genomes_project 3 94649467 94681864 + MGP_CBAJ_P0061175 Mef2d protein_coding protein_coding MGP_CBAJ_T0061176.1 MGP_CBAJ_G0027075.1 mouse_genomes_project 3 94649511 94679709 + MGP_CBAJ_P0061176 Mef2d protein_coding protein_coding MGP_CBAJ_T0061177.1 MGP_CBAJ_G0027075.1 mouse_genomes_project 3 94649667 94678434 + MGP_CBAJ_P0061177 Mef2d protein_coding protein_coding MGP_CBAJ_T0061178.1 MGP_CBAJ_G0027075.1 mouse_genomes_project 3 94649667 94678434 + MGP_CBAJ_P0061178 Mef2d protein_coding protein_coding MGP_CBAJ_T0061179.1 MGP_CBAJ_G0027075.1 mouse_genomes_project 3 94649669 94663098 + Mef2d protein_coding retained_intron MGP_CBAJ_T0061180.1 MGP_CBAJ_G0027075.1 mouse_genomes_project 3 94670054 94678564 + Mef2d protein_coding processed_transcript MGP_CBAJ_T0061181.1 MGP_CBAJ_G0027075.1 mouse_genomes_project 3 94678030 94678685 + Mef2d protein_coding processed_transcript MGP_CBAJ_T0001266.1 MGP_CBAJ_G0001193.1 mouse_genomes_project 3 132807931 132811534 - TEC TEC MGP_CBAJ_T0063558.1 MGP_CBAJ_G0027590.1 mouse_genomes_project 3 150145027 150263392 + MGP_CBAJ_P0063558 Emcn protein_coding protein_coding MGP_CBAJ_T0063559.1 MGP_CBAJ_G0027590.1 mouse_genomes_project 3 150145050 150243992 + Emcn protein_coding retained_intron MGP_CBAJ_T0063560.1 MGP_CBAJ_G0027590.1 mouse_genomes_project 3 150145103 150262276 + MGP_CBAJ_P0063560 Emcn protein_coding protein_coding MGP_CBAJ_T0063561.1 MGP_CBAJ_G0027590.1 mouse_genomes_project 3 150145134 150258551 + MGP_CBAJ_P0063561 Emcn protein_coding protein_coding MGP_CBAJ_T0014124.1 MGP_CBAJ_G0012236.1 mouse_genomes_project 3 145123697 145127978 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013945.1 MGP_CBAJ_G0012057.1 mouse_genomes_project 3 83366676 83367225 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013792.1 MGP_CBAJ_G0011904.1 mouse_genomes_project 3 33801891 33804837 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013824.1 MGP_CBAJ_G0011936.1 mouse_genomes_project 3 42821018 42821661 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0060946.1 MGP_CBAJ_G0027020.1 mouse_genomes_project 3 88341864 88351578 - MGP_CBAJ_P0060946 Npy2r protein_coding protein_coding MGP_CBAJ_T0060947.1 MGP_CBAJ_G0027020.1 mouse_genomes_project 3 88341867 88351546 - MGP_CBAJ_P0060947 Npy2r protein_coding protein_coding MGP_CBAJ_T0060948.1 MGP_CBAJ_G0027020.1 mouse_genomes_project 3 88343430 88351454 - MGP_CBAJ_P0060948 Npy2r protein_coding protein_coding MGP_CBAJ_T0060949.1 MGP_CBAJ_G0027020.1 mouse_genomes_project 3 88343430 88351454 - MGP_CBAJ_P0060949 Npy2r protein_coding protein_coding MGP_CBAJ_T0098035.1 MGP_CBAJ_G0036308.1 mouse_genomes_project 3 73739099 73739213 + Gm25621 rRNA rRNA MGP_CBAJ_T0007528.1 MGP_CBAJ_G0006151.1 mouse_genomes_project 3 104450819 104467924 - lincRNA lincRNA MGP_CBAJ_T0062193.1 MGP_CBAJ_G0027305.1 mouse_genomes_project 3 104778356 104799976 + MGP_CBAJ_P0062193 Gm42957 protein_coding nonsense_mediated_decay MGP_CBAJ_T0013770.1 MGP_CBAJ_G0011882.1 mouse_genomes_project 3 19950084 19950505 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0062542.1 MGP_CBAJ_G0027382.1 mouse_genomes_project 3 112946655 113179816 - MGP_CBAJ_P0062542 Magi3 protein_coding protein_coding MGP_CBAJ_T0062543.1 MGP_CBAJ_G0027382.1 mouse_genomes_project 3 112947021 113179545 - MGP_CBAJ_P0062543 Magi3 protein_coding protein_coding MGP_CBAJ_T0062544.1 MGP_CBAJ_G0027382.1 mouse_genomes_project 3 112949865 113179680 - MGP_CBAJ_P0062544 Magi3 protein_coding protein_coding MGP_CBAJ_T0062545.1 MGP_CBAJ_G0027382.1 mouse_genomes_project 3 113004979 113006784 - Magi3 protein_coding retained_intron MGP_CBAJ_T0001186.1 MGP_CBAJ_G0001113.1 mouse_genomes_project 3 60476481 60477657 - TEC TEC MGP_CBAJ_T0010405.1 MGP_CBAJ_G0008543.1 mouse_genomes_project 3 97209031 97209095 + Mir7012 miRNA miRNA MGP_CBAJ_T0014066.1 MGP_CBAJ_G0012178.1 mouse_genomes_project 3 122274647 122275588 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0061487.1 MGP_CBAJ_G0027124.1 mouse_genomes_project 3 96162735 96172283 - MGP_CBAJ_P0061487 Zbtb7b protein_coding protein_coding MGP_CBAJ_T0061488.1 MGP_CBAJ_G0027124.1 mouse_genomes_project 3 96162735 96178392 - MGP_CBAJ_P0061488 Zbtb7b protein_coding protein_coding MGP_CBAJ_T0061489.1 MGP_CBAJ_G0027124.1 mouse_genomes_project 3 96162735 96177162 - MGP_CBAJ_P0061489 Zbtb7b protein_coding protein_coding MGP_CBAJ_T0061490.1 MGP_CBAJ_G0027124.1 mouse_genomes_project 3 96162735 96172765 - MGP_CBAJ_P0061490 Zbtb7b protein_coding protein_coding MGP_CBAJ_T0061491.1 MGP_CBAJ_G0027124.1 mouse_genomes_project 3 96166229 96178695 - MGP_CBAJ_P0061491 Zbtb7b protein_coding protein_coding MGP_CBAJ_T0061492.1 MGP_CBAJ_G0027124.1 mouse_genomes_project 3 96166513 96178652 - MGP_CBAJ_P0061492 Zbtb7b protein_coding protein_coding MGP_CBAJ_T0061493.1 MGP_CBAJ_G0027124.1 mouse_genomes_project 3 96177605 96179793 - Zbtb7b protein_coding processed_transcript MGP_CBAJ_T0060651.1 MGP_CBAJ_G0026953.1 mouse_genomes_project 3 66638266 66727722 + MGP_CBAJ_P0060651 Mme protein_coding protein_coding MGP_CBAJ_T0060652.1 MGP_CBAJ_G0026953.1 mouse_genomes_project 3 66695178 66728091 + MGP_CBAJ_P0060652 Mme protein_coding protein_coding MGP_CBAJ_T0060653.1 MGP_CBAJ_G0026953.1 mouse_genomes_project 3 66695360 66728083 + MGP_CBAJ_P0060653 Mme protein_coding protein_coding MGP_CBAJ_T0060654.1 MGP_CBAJ_G0026953.1 mouse_genomes_project 3 66695473 66782830 + MGP_CBAJ_P0060654 Mme protein_coding protein_coding MGP_CBAJ_T0060655.1 MGP_CBAJ_G0026953.1 mouse_genomes_project 3 66695784 66787760 + MGP_CBAJ_P0060655 Mme protein_coding protein_coding MGP_CBAJ_T0060656.1 MGP_CBAJ_G0026953.1 mouse_genomes_project 3 66696007 66783357 + MGP_CBAJ_P0060656 Mme protein_coding protein_coding MGP_CBAJ_T0060657.1 MGP_CBAJ_G0026953.1 mouse_genomes_project 3 66696964 66727963 + MGP_CBAJ_P0060657 Mme protein_coding protein_coding MGP_CBAJ_T0060658.1 MGP_CBAJ_G0026953.1 mouse_genomes_project 3 66700072 66745797 + Mme protein_coding retained_intron MGP_CBAJ_T0013801.1 MGP_CBAJ_G0011913.1 mouse_genomes_project 3 36833454 36834001 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0060132.1 MGP_CBAJ_G0026851.1 mouse_genomes_project 3 36894938 36901319 + MGP_CBAJ_P0060132 1810062G17Rik protein_coding protein_coding MGP_CBAJ_T0099158.1 MGP_CBAJ_G0037413.1 mouse_genomes_project 3 46197645 46197750 + Gm24997 snRNA snRNA MGP_CBAJ_T0061230.1 MGP_CBAJ_G0027085.1 mouse_genomes_project 3 95009291 95024700 - MGP_CBAJ_P0061230 Slc25a44 protein_coding protein_coding MGP_CBAJ_T0061231.1 MGP_CBAJ_G0027085.1 mouse_genomes_project 3 95009291 95024701 - MGP_CBAJ_P0061231 Slc25a44 protein_coding protein_coding MGP_CBAJ_T0061232.1 MGP_CBAJ_G0027085.1 mouse_genomes_project 3 95009292 95024732 - MGP_CBAJ_P0061232 Slc25a44 protein_coding protein_coding MGP_CBAJ_T0061233.1 MGP_CBAJ_G0027085.1 mouse_genomes_project 3 95009292 95024705 - MGP_CBAJ_P0061233 Slc25a44 protein_coding protein_coding MGP_CBAJ_T0062225.1 MGP_CBAJ_G0027311.1 mouse_genomes_project 3 104887536 104965392 + MGP_CBAJ_P0062225 Rnf115 protein_coding protein_coding MGP_CBAJ_T0062226.1 MGP_CBAJ_G0027311.1 mouse_genomes_project 3 104887544 104965878 + MGP_CBAJ_P0062226 Rnf115 protein_coding nonsense_mediated_decay MGP_CBAJ_T0062227.1 MGP_CBAJ_G0027311.1 mouse_genomes_project 3 104887711 104957757 + Rnf115 protein_coding processed_transcript MGP_CBAJ_T0061032.1 MGP_CBAJ_G0027043.1 mouse_genomes_project 3 92166981 92288735 + Sh3d19 protein_coding processed_transcript MGP_CBAJ_T0061034.1 MGP_CBAJ_G0027043.1 mouse_genomes_project 3 92240534 92288491 + Sh3d19 protein_coding processed_transcript MGP_CBAJ_T0061035.1 MGP_CBAJ_G0027043.1 mouse_genomes_project 3 92242272 92288779 + Sh3d19 protein_coding processed_transcript MGP_CBAJ_T0061036.1 MGP_CBAJ_G0027043.1 mouse_genomes_project 3 92242380 92288768 + Sh3d19 protein_coding processed_transcript MGP_CBAJ_T0061037.1 MGP_CBAJ_G0027043.1 mouse_genomes_project 3 92274419 92339714 + MGP_CBAJ_P0061037 Sh3d19 protein_coding protein_coding MGP_CBAJ_T0061038.1 MGP_CBAJ_G0027043.1 mouse_genomes_project 3 92289630 92339710 + MGP_CBAJ_P0061038 Sh3d19 protein_coding protein_coding MGP_CBAJ_T0061039.1 MGP_CBAJ_G0027043.1 mouse_genomes_project 3 92334531 92338302 + Sh3d19 protein_coding retained_intron MGP_CBAJ_T0013939.1 MGP_CBAJ_G0012051.1 mouse_genomes_project 3 82038017 82038847 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004450.1 MGP_CBAJ_G0003865.1 mouse_genomes_project 4 134811285 134813433 - Gm12932 antisense antisense MGP_CBAJ_T0014577.1 MGP_CBAJ_G0012689.1 mouse_genomes_project 4 144785953 144786136 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001378.1 MGP_CBAJ_G0001304.1 mouse_genomes_project 4 114346014 114347054 - TEC TEC MGP_CBAJ_T0069131.1 MGP_CBAJ_G0028843.1 mouse_genomes_project 4 166865435 166877025 - MGP_CBAJ_P0069131 Rnf207 protein_coding protein_coding MGP_CBAJ_T0069132.1 MGP_CBAJ_G0028843.1 mouse_genomes_project 4 166865727 166867450 - Rnf207 protein_coding retained_intron MGP_CBAJ_T0069133.1 MGP_CBAJ_G0028843.1 mouse_genomes_project 4 166869800 166876875 - MGP_CBAJ_P0069133 Rnf207 protein_coding protein_coding MGP_CBAJ_T0069134.1 MGP_CBAJ_G0028843.1 mouse_genomes_project 4 166869973 166871820 - Rnf207 protein_coding retained_intron MGP_CBAJ_T0069135.1 MGP_CBAJ_G0028843.1 mouse_genomes_project 4 166870132 166871765 - Rnf207 protein_coding retained_intron MGP_CBAJ_T0069136.1 MGP_CBAJ_G0028843.1 mouse_genomes_project 4 166871250 166871817 - Rnf207 protein_coding retained_intron MGP_CBAJ_T0069137.1 MGP_CBAJ_G0028843.1 mouse_genomes_project 4 166871809 166876898 - MGP_CBAJ_P0069137 Rnf207 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069138.1 MGP_CBAJ_G0028843.1 mouse_genomes_project 4 166871819 166874382 - Rnf207 protein_coding retained_intron MGP_CBAJ_T0069139.1 MGP_CBAJ_G0028843.1 mouse_genomes_project 4 166872969 166877410 - Rnf207 protein_coding retained_intron MGP_CBAJ_T0069140.1 MGP_CBAJ_G0028843.1 mouse_genomes_project 4 166872971 166877036 - Rnf207 protein_coding retained_intron MGP_CBAJ_T0069141.1 MGP_CBAJ_G0028843.1 mouse_genomes_project 4 166873302 166877042 - Rnf207 protein_coding retained_intron MGP_CBAJ_T0069142.1 MGP_CBAJ_G0028843.1 mouse_genomes_project 4 166873877 166874745 - Rnf207 protein_coding retained_intron MGP_CBAJ_T0068423.1 MGP_CBAJ_G0028662.1 mouse_genomes_project 4 150714514 150729535 - MGP_CBAJ_P0068423 Ubxn10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068424.1 MGP_CBAJ_G0028662.1 mouse_genomes_project 4 150722888 150729579 - MGP_CBAJ_P0068424 Ubxn10 protein_coding protein_coding MGP_CBAJ_T0068425.1 MGP_CBAJ_G0028662.1 mouse_genomes_project 4 150722888 150741518 - MGP_CBAJ_P0068425 Ubxn10 protein_coding protein_coding MGP_CBAJ_T0068426.1 MGP_CBAJ_G0028662.1 mouse_genomes_project 4 150723188 150729172 - MGP_CBAJ_P0068426 Ubxn10 protein_coding protein_coding MGP_CBAJ_T0068430.1 MGP_CBAJ_G0028662.1 mouse_genomes_project 4 150736231 150741487 - Ubxn10 protein_coding processed_transcript MGP_CBAJ_T0065819.1 MGP_CBAJ_G0028078.1 mouse_genomes_project 4 92489109 92510406 - Plin2 protein_coding processed_transcript MGP_CBAJ_T0065820.1 MGP_CBAJ_G0028078.1 mouse_genomes_project 4 92508287 92521575 - MGP_CBAJ_P0065820 Plin2 protein_coding protein_coding MGP_CBAJ_T0065821.1 MGP_CBAJ_G0028078.1 mouse_genomes_project 4 92508629 92510367 - Plin2 protein_coding processed_transcript MGP_CBAJ_T0065822.1 MGP_CBAJ_G0028078.1 mouse_genomes_project 4 92508878 92510871 - Plin2 protein_coding processed_transcript MGP_CBAJ_T0065823.1 MGP_CBAJ_G0028078.1 mouse_genomes_project 4 92511844 92517491 - MGP_CBAJ_P0065823 Plin2 protein_coding protein_coding MGP_CBAJ_T0065824.1 MGP_CBAJ_G0028078.1 mouse_genomes_project 4 92514328 92521075 - MGP_CBAJ_P0065824 Plin2 protein_coding protein_coding MGP_CBAJ_T0065825.1 MGP_CBAJ_G0028078.1 mouse_genomes_project 4 92514328 92521283 - MGP_CBAJ_P0065825 Plin2 protein_coding protein_coding MGP_CBAJ_T0065826.1 MGP_CBAJ_G0028078.1 mouse_genomes_project 4 92519179 92521501 - Plin2 protein_coding processed_transcript MGP_CBAJ_T0017782.1 MGP_CBAJ_G0015282.1 mouse_genomes_project 4 33084748 33095099 - Gm11934 processed_transcript processed_transcript MGP_CBAJ_T0068838.1 MGP_CBAJ_G0028790.1 mouse_genomes_project 4 162397727 162440112 + MGP_CBAJ_P0068838 Exosc10 protein_coding protein_coding MGP_CBAJ_T0068839.1 MGP_CBAJ_G0028790.1 mouse_genomes_project 4 162397729 162440101 + Exosc10 protein_coding processed_transcript MGP_CBAJ_T0068840.1 MGP_CBAJ_G0028790.1 mouse_genomes_project 4 162397753 162440104 + MGP_CBAJ_P0068840 Exosc10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068841.1 MGP_CBAJ_G0028790.1 mouse_genomes_project 4 162397760 162440112 + MGP_CBAJ_P0068841 Exosc10 protein_coding protein_coding MGP_CBAJ_T0068842.1 MGP_CBAJ_G0028790.1 mouse_genomes_project 4 162409393 162410484 + MGP_CBAJ_P0068842 Exosc10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068843.1 MGP_CBAJ_G0028790.1 mouse_genomes_project 4 162415286 162430750 + Exosc10 protein_coding retained_intron MGP_CBAJ_T0068844.1 MGP_CBAJ_G0028790.1 mouse_genomes_project 4 162419334 162430640 + Exosc10 protein_coding retained_intron MGP_CBAJ_T0068845.1 MGP_CBAJ_G0028790.1 mouse_genomes_project 4 162430303 162440032 + Exosc10 protein_coding processed_transcript MGP_CBAJ_T0014334.1 MGP_CBAJ_G0012446.1 mouse_genomes_project 4 46615667 46615957 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065755.1 MGP_CBAJ_G0028069.1 mouse_genomes_project 4 89005138 89038736 - MGP_CBAJ_P0065755 Psip1 protein_coding protein_coding MGP_CBAJ_T0065756.1 MGP_CBAJ_G0028069.1 mouse_genomes_project 4 89007533 89009794 - Psip1 protein_coding retained_intron MGP_CBAJ_T0065757.1 MGP_CBAJ_G0028069.1 mouse_genomes_project 4 89011372 89017020 - MGP_CBAJ_P0065757 Psip1 protein_coding protein_coding MGP_CBAJ_T0065758.1 MGP_CBAJ_G0028069.1 mouse_genomes_project 4 89011372 89038730 - MGP_CBAJ_P0065758 Psip1 protein_coding protein_coding MGP_CBAJ_T0065759.1 MGP_CBAJ_G0028069.1 mouse_genomes_project 4 89011372 89038735 - MGP_CBAJ_P0065759 Psip1 protein_coding protein_coding MGP_CBAJ_T0065760.1 MGP_CBAJ_G0028069.1 mouse_genomes_project 4 89012331 89017099 - Psip1 protein_coding retained_intron MGP_CBAJ_T0065762.1 MGP_CBAJ_G0028069.1 mouse_genomes_project 4 89028687 89038455 - MGP_CBAJ_P0065762 Psip1 protein_coding protein_coding MGP_CBAJ_T0066129.1 MGP_CBAJ_G0028165.1 mouse_genomes_project 4 109650983 110261760 + MGP_CBAJ_P0066129 Pde4b protein_coding protein_coding MGP_CBAJ_T0066130.1 MGP_CBAJ_G0028165.1 mouse_genomes_project 4 109651165 109785061 + Pde4b protein_coding retained_intron MGP_CBAJ_T0066131.1 MGP_CBAJ_G0028165.1 mouse_genomes_project 4 109651181 110209145 + MGP_CBAJ_P0066131 Pde4b protein_coding nonsense_mediated_decay MGP_CBAJ_T0066132.1 MGP_CBAJ_G0028165.1 mouse_genomes_project 4 109858858 110207472 + MGP_CBAJ_P0066132 Pde4b protein_coding protein_coding MGP_CBAJ_T0066133.1 MGP_CBAJ_G0028165.1 mouse_genomes_project 4 109859118 110263186 + MGP_CBAJ_P0066133 Pde4b protein_coding protein_coding MGP_CBAJ_T0066134.1 MGP_CBAJ_G0028165.1 mouse_genomes_project 4 109859345 110156376 + MGP_CBAJ_P0066134 Pde4b protein_coding nonsense_mediated_decay MGP_CBAJ_T0066135.1 MGP_CBAJ_G0028165.1 mouse_genomes_project 4 110060083 110261463 + MGP_CBAJ_P0066135 Pde4b protein_coding protein_coding MGP_CBAJ_T0066136.1 MGP_CBAJ_G0028165.1 mouse_genomes_project 4 110071231 110194024 + MGP_CBAJ_P0066136 Pde4b protein_coding protein_coding MGP_CBAJ_T0066137.1 MGP_CBAJ_G0028165.1 mouse_genomes_project 4 110115418 110137085 + Pde4b protein_coding retained_intron MGP_CBAJ_T0066138.1 MGP_CBAJ_G0028165.1 mouse_genomes_project 4 110221536 110261774 + MGP_CBAJ_P0066138 Pde4b protein_coding protein_coding MGP_CBAJ_T0066139.1 MGP_CBAJ_G0028165.1 mouse_genomes_project 4 110243483 110261630 + MGP_CBAJ_P0066139 Pde4b protein_coding protein_coding MGP_CBAJ_T0066140.1 MGP_CBAJ_G0028165.1 mouse_genomes_project 4 110245652 110261788 + MGP_CBAJ_P0066140 Pde4b protein_coding protein_coding MGP_CBAJ_T0066141.1 MGP_CBAJ_G0028165.1 mouse_genomes_project 4 110245772 110259376 + MGP_CBAJ_P0066141 Pde4b protein_coding protein_coding MGP_CBAJ_T0064712.1 MGP_CBAJ_G0027830.1 mouse_genomes_project 4 42185446 42267208 - MGP_CBAJ_P0064712 Kif24 protein_coding protein_coding MGP_CBAJ_T0064713.1 MGP_CBAJ_G0027830.1 mouse_genomes_project 4 42186312 42267216 - MGP_CBAJ_P0064713 Kif24 protein_coding protein_coding MGP_CBAJ_T0064714.1 MGP_CBAJ_G0027830.1 mouse_genomes_project 4 42189886 42210830 - Kif24 protein_coding processed_transcript MGP_CBAJ_T0064715.1 MGP_CBAJ_G0027830.1 mouse_genomes_project 4 42200608 42202094 - Kif24 protein_coding processed_transcript MGP_CBAJ_T0064716.1 MGP_CBAJ_G0027830.1 mouse_genomes_project 4 42214599 42267208 - Kif24 protein_coding processed_transcript MGP_CBAJ_T0064717.1 MGP_CBAJ_G0027830.1 mouse_genomes_project 4 42231668 42267214 - MGP_CBAJ_P0064717 Kif24 protein_coding protein_coding MGP_CBAJ_T0064718.1 MGP_CBAJ_G0027830.1 mouse_genomes_project 4 42250470 42267214 - Kif24 protein_coding processed_transcript MGP_CBAJ_T0067222.1 MGP_CBAJ_G0028400.1 mouse_genomes_project 4 132757838 132774144 + MGP_CBAJ_P0067222 Heyl protein_coding protein_coding MGP_CBAJ_T0067223.1 MGP_CBAJ_G0028400.1 mouse_genomes_project 4 132758135 132764947 + Heyl protein_coding processed_transcript MGP_CBAJ_T0067224.1 MGP_CBAJ_G0028400.1 mouse_genomes_project 4 132764044 132770259 + Heyl protein_coding processed_transcript MGP_CBAJ_T0065731.1 MGP_CBAJ_G0028066.1 mouse_genomes_project 4 88398412 88557434 - MGP_CBAJ_P0065731 Frem1 protein_coding protein_coding MGP_CBAJ_T0065732.1 MGP_CBAJ_G0028066.1 mouse_genomes_project 4 88398419 88523792 - MGP_CBAJ_P0065732 Frem1 protein_coding protein_coding MGP_CBAJ_T0065733.1 MGP_CBAJ_G0028066.1 mouse_genomes_project 4 88398419 88557606 - MGP_CBAJ_P0065733 Frem1 protein_coding protein_coding MGP_CBAJ_T0065734.1 MGP_CBAJ_G0028066.1 mouse_genomes_project 4 88401056 88414946 - Frem1 protein_coding processed_transcript MGP_CBAJ_T0065735.1 MGP_CBAJ_G0028066.1 mouse_genomes_project 4 88416144 88425305 - Frem1 protein_coding retained_intron MGP_CBAJ_T0065736.1 MGP_CBAJ_G0028066.1 mouse_genomes_project 4 88435587 88440359 - Frem1 protein_coding retained_intron MGP_CBAJ_T0065737.1 MGP_CBAJ_G0028066.1 mouse_genomes_project 4 88437904 88473033 - MGP_CBAJ_P0065737 Frem1 protein_coding protein_coding MGP_CBAJ_T0065738.1 MGP_CBAJ_G0028066.1 mouse_genomes_project 4 88493404 88557606 - Frem1 protein_coding processed_transcript MGP_CBAJ_T0069413.1 MGP_CBAJ_G0028892.1 mouse_genomes_project 4 170848301 170851035 + MGP_CBAJ_P0069413 Ankrd65 protein_coding protein_coding MGP_CBAJ_T0069414.1 MGP_CBAJ_G0028892.1 mouse_genomes_project 4 170849034 170857199 + MGP_CBAJ_P0069414 Ankrd65 protein_coding protein_coding MGP_CBAJ_T0066984.1 MGP_CBAJ_G0028329.1 mouse_genomes_project 4 127434086 127440490 + MGP_CBAJ_P0066984 Med8 protein_coding protein_coding MGP_CBAJ_T0066985.1 MGP_CBAJ_G0028329.1 mouse_genomes_project 4 127434098 127439824 + MGP_CBAJ_P0066985 Med8 protein_coding protein_coding MGP_CBAJ_T0066986.1 MGP_CBAJ_G0028329.1 mouse_genomes_project 4 127434104 127439821 + MGP_CBAJ_P0066986 Med8 protein_coding protein_coding MGP_CBAJ_T0066987.1 MGP_CBAJ_G0028329.1 mouse_genomes_project 4 127434105 127438578 + Med8 protein_coding processed_transcript MGP_CBAJ_T0066988.1 MGP_CBAJ_G0028329.1 mouse_genomes_project 4 127435097 127436546 + Med8 protein_coding processed_transcript MGP_CBAJ_T0066989.1 MGP_CBAJ_G0028329.1 mouse_genomes_project 4 127436186 127437267 + Med8 protein_coding processed_transcript MGP_CBAJ_T0066990.1 MGP_CBAJ_G0028329.1 mouse_genomes_project 4 127436377 127438788 + Med8 protein_coding processed_transcript MGP_CBAJ_T0014402.1 MGP_CBAJ_G0012514.1 mouse_genomes_project 4 77761439 77762302 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098384.1 MGP_CBAJ_G0036650.1 mouse_genomes_project 4 62087673 62090065 - Gm12594 sense_intronic sense_intronic MGP_CBAJ_T0068284.1 MGP_CBAJ_G0028630.1 mouse_genomes_project 4 147953350 148040455 + MGP_CBAJ_P0068284 Luzp1 protein_coding protein_coding MGP_CBAJ_T0068285.1 MGP_CBAJ_G0028630.1 mouse_genomes_project 4 147953350 148040451 + MGP_CBAJ_P0068285 Luzp1 protein_coding protein_coding MGP_CBAJ_T0068286.1 MGP_CBAJ_G0028630.1 mouse_genomes_project 4 147953393 148008525 + Luzp1 protein_coding retained_intron MGP_CBAJ_T0068287.1 MGP_CBAJ_G0028630.1 mouse_genomes_project 4 147953440 148031805 + MGP_CBAJ_P0068287 Luzp1 protein_coding protein_coding MGP_CBAJ_T0068288.1 MGP_CBAJ_G0028630.1 mouse_genomes_project 4 148008208 148037529 + MGP_CBAJ_P0068288 Luzp1 protein_coding protein_coding MGP_CBAJ_T0068289.1 MGP_CBAJ_G0028630.1 mouse_genomes_project 4 148031491 148040454 + MGP_CBAJ_P0068289 Luzp1 protein_coding protein_coding MGP_CBAJ_T0068290.1 MGP_CBAJ_G0028630.1 mouse_genomes_project 4 148036399 148045923 + MGP_CBAJ_P0068290 Luzp1 protein_coding protein_coding MGP_CBAJ_T0098043.1 MGP_CBAJ_G0036316.1 mouse_genomes_project 4 56301035 56301154 + n-R5s185 rRNA rRNA MGP_CBAJ_T0066998.1 MGP_CBAJ_G0028332.1 mouse_genomes_project 4 127476472 127491328 - MGP_CBAJ_P0066998 Mpl protein_coding protein_coding MGP_CBAJ_T0066999.1 MGP_CBAJ_G0028332.1 mouse_genomes_project 4 127476474 127491310 - MGP_CBAJ_P0066999 Mpl protein_coding protein_coding MGP_CBAJ_T0067000.1 MGP_CBAJ_G0028332.1 mouse_genomes_project 4 127477329 127491272 - MGP_CBAJ_P0067000 Mpl protein_coding protein_coding MGP_CBAJ_T0067001.1 MGP_CBAJ_G0028332.1 mouse_genomes_project 4 127477486 127491265 - MGP_CBAJ_P0067001 Mpl protein_coding protein_coding MGP_CBAJ_T0004518.1 MGP_CBAJ_G0003917.1 mouse_genomes_project 4 165161625 165190655 - 1700045H11Rik antisense antisense MGP_CBAJ_T0069184.1 MGP_CBAJ_G0028850.1 mouse_genomes_project 4 168786024 168793461 - MGP_CBAJ_P0069184 Dffb protein_coding unknown_likely_coding MGP_CBAJ_T0069185.1 MGP_CBAJ_G0028850.1 mouse_genomes_project 4 168786032 168796679 - MGP_CBAJ_P0069185 Dffb protein_coding protein_coding MGP_CBAJ_T0069186.1 MGP_CBAJ_G0028850.1 mouse_genomes_project 4 168790656 168796604 - Dffb protein_coding processed_transcript MGP_CBAJ_T0069187.1 MGP_CBAJ_G0028850.1 mouse_genomes_project 4 168794012 168796610 - Dffb protein_coding retained_intron MGP_CBAJ_T0069188.1 MGP_CBAJ_G0028850.1 mouse_genomes_project 4 168794160 168796542 - MGP_CBAJ_P0069188 Dffb protein_coding unknown_likely_coding MGP_CBAJ_T0069189.1 MGP_CBAJ_G0028850.1 mouse_genomes_project 4 168796055 168796634 - Dffb protein_coding retained_intron MGP_CBAJ_T0001384.1 MGP_CBAJ_G0001309.1 mouse_genomes_project 4 142350169 142354779 + TEC TEC MGP_CBAJ_T0099295.1 MGP_CBAJ_G0037550.1 mouse_genomes_project 4 126091878 126091994 + Gm23287 snRNA snRNA MGP_CBAJ_T0014266.1 MGP_CBAJ_G0012378.1 mouse_genomes_project 4 24007931 24008625 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0066093.1 MGP_CBAJ_G0028154.1 mouse_genomes_project 4 108584691 108715548 - MGP_CBAJ_P0066093 Jak1 protein_coding protein_coding MGP_CBAJ_T0066094.1 MGP_CBAJ_G0028154.1 mouse_genomes_project 4 108586568 108587439 - Jak1 protein_coding processed_transcript MGP_CBAJ_T0066095.1 MGP_CBAJ_G0028154.1 mouse_genomes_project 4 108611806 108617642 - Jak1 protein_coding processed_transcript MGP_CBAJ_T0066096.1 MGP_CBAJ_G0028154.1 mouse_genomes_project 4 108613234 108617667 - Jak1 protein_coding processed_transcript MGP_CBAJ_T0066097.1 MGP_CBAJ_G0028154.1 mouse_genomes_project 4 108614087 108715547 - Jak1 protein_coding processed_transcript MGP_CBAJ_T0066098.1 MGP_CBAJ_G0028154.1 mouse_genomes_project 4 108614127 108715489 - Jak1 protein_coding processed_transcript MGP_CBAJ_T0066099.1 MGP_CBAJ_G0028154.1 mouse_genomes_project 4 108623842 108715539 - MGP_CBAJ_P0066099 Jak1 protein_coding protein_coding MGP_CBAJ_T0066100.1 MGP_CBAJ_G0028154.1 mouse_genomes_project 4 108630054 108715492 - Jak1 protein_coding processed_transcript MGP_CBAJ_T0066723.1 MGP_CBAJ_G0028282.1 mouse_genomes_project 4 124826196 124842304 + Pomgnt1 protein_coding processed_transcript MGP_CBAJ_T0066725.1 MGP_CBAJ_G0028282.1 mouse_genomes_project 4 124840690 124863066 + MGP_CBAJ_P0066725 Pomgnt1 protein_coding protein_coding MGP_CBAJ_T0066726.1 MGP_CBAJ_G0028282.1 mouse_genomes_project 4 124840705 124863067 + Pomgnt1 protein_coding retained_intron MGP_CBAJ_T0066728.1 MGP_CBAJ_G0028282.1 mouse_genomes_project 4 124841208 124863062 + MGP_CBAJ_P0066728 Pomgnt1 protein_coding protein_coding MGP_CBAJ_T0066729.1 MGP_CBAJ_G0028282.1 mouse_genomes_project 4 124853735 124863062 + MGP_CBAJ_P0066729 Pomgnt1 protein_coding protein_coding MGP_CBAJ_T0066730.1 MGP_CBAJ_G0028282.1 mouse_genomes_project 4 124853742 124863062 + MGP_CBAJ_P0066730 Pomgnt1 protein_coding protein_coding MGP_CBAJ_T0066731.1 MGP_CBAJ_G0028282.1 mouse_genomes_project 4 124854648 124862655 + MGP_CBAJ_P0066731 Pomgnt1 protein_coding protein_coding MGP_CBAJ_T0066732.1 MGP_CBAJ_G0028282.1 mouse_genomes_project 4 124857812 124859010 + Pomgnt1 protein_coding processed_transcript MGP_CBAJ_T0066733.1 MGP_CBAJ_G0028282.1 mouse_genomes_project 4 124858536 124862212 + Pomgnt1 protein_coding retained_intron MGP_CBAJ_T0066734.1 MGP_CBAJ_G0028282.1 mouse_genomes_project 4 124859154 124859871 + Pomgnt1 protein_coding retained_intron MGP_CBAJ_T0066735.1 MGP_CBAJ_G0028282.1 mouse_genomes_project 4 124859166 124862276 + Pomgnt1 protein_coding processed_transcript MGP_CBAJ_T0066736.1 MGP_CBAJ_G0028282.1 mouse_genomes_project 4 124860609 124862243 + Pomgnt1 protein_coding retained_intron MGP_CBAJ_T0068785.1 MGP_CBAJ_G0028776.1 mouse_genomes_project 4 161712866 161714284 + MGP_CBAJ_P0068785 Nppb protein_coding protein_coding MGP_CBAJ_T0014462.1 MGP_CBAJ_G0012574.1 mouse_genomes_project 4 104480153 104480820 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014260.1 MGP_CBAJ_G0012372.1 mouse_genomes_project 4 21159583 21160285 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007745.1 MGP_CBAJ_G0006324.1 mouse_genomes_project 4 56616517 56617015 - lincRNA lincRNA MGP_CBAJ_T0065346.1 MGP_CBAJ_G0027964.1 mouse_genomes_project 4 55373722 55506770 - MGP_CBAJ_P0065346 Abca1 protein_coding protein_coding MGP_CBAJ_T0065347.1 MGP_CBAJ_G0027964.1 mouse_genomes_project 4 55378423 55383820 - Abca1 protein_coding processed_transcript MGP_CBAJ_T0004405.1 MGP_CBAJ_G0003830.1 mouse_genomes_project 4 110661984 110686668 - Gm12709 antisense antisense MGP_CBAJ_T0014418.1 MGP_CBAJ_G0012530.1 mouse_genomes_project 4 81664776 81665121 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014239.1 MGP_CBAJ_G0012351.1 mouse_genomes_project 4 14516254 14516913 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014624.1 MGP_CBAJ_G0012736.1 mouse_genomes_project 4 169074893 169075365 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014612.1 MGP_CBAJ_G0012724.1 mouse_genomes_project 4 163068473 163068793 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004361.1 MGP_CBAJ_G0003798.1 mouse_genomes_project 4 44805377 44811850 + antisense antisense MGP_CBAJ_T0067897.1 MGP_CBAJ_G0028541.1 mouse_genomes_project 4 143401875 143414545 + Rpa2 protein_coding processed_transcript MGP_CBAJ_T0067898.1 MGP_CBAJ_G0028541.1 mouse_genomes_project 4 143401878 143416579 + MGP_CBAJ_P0067898 Rpa2 protein_coding protein_coding MGP_CBAJ_T0067899.1 MGP_CBAJ_G0028541.1 mouse_genomes_project 4 143401919 143412070 + Rpa2 protein_coding retained_intron MGP_CBAJ_T0067900.1 MGP_CBAJ_G0028541.1 mouse_genomes_project 4 143402178 143409954 + Rpa2 protein_coding retained_intron MGP_CBAJ_T0067901.1 MGP_CBAJ_G0028541.1 mouse_genomes_project 4 143406680 143410142 + Rpa2 protein_coding retained_intron MGP_CBAJ_T0067902.1 MGP_CBAJ_G0028541.1 mouse_genomes_project 4 143412962 143414989 + MGP_CBAJ_P0067902 Rpa2 protein_coding protein_coding MGP_CBAJ_T0014255.1 MGP_CBAJ_G0012367.1 mouse_genomes_project 4 20394576 20396004 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101908.1 MGP_CBAJ_G0039939.1 mouse_genomes_project 4 123793433 123953339 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0014384.1 MGP_CBAJ_G0012496.1 mouse_genomes_project 4 68587943 68588301 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010446.1 MGP_CBAJ_G0008584.1 mouse_genomes_project 4 8384714 8384800 + Mir684-2 miRNA miRNA MGP_CBAJ_T0064720.1 MGP_CBAJ_G0027832.1 mouse_genomes_project 4 42297700 42305174 - MGP_CBAJ_P0064720 AI464131 protein_coding protein_coding MGP_CBAJ_T0064721.1 MGP_CBAJ_G0027832.1 mouse_genomes_project 4 42301592 42304766 - MGP_CBAJ_P0064721 AI464131 protein_coding protein_coding MGP_CBAJ_T0014220.1 MGP_CBAJ_G0012332.1 mouse_genomes_project 4 9498443 9498718 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068609.1 MGP_CBAJ_G0028709.1 mouse_genomes_project 4 153877827 153881273 - MGP_CBAJ_P0068609 Gm694 protein_coding protein_coding MGP_CBAJ_T0065037.1 MGP_CBAJ_G0027890.1 mouse_genomes_project 4 44885491 44886448 - MGP_CBAJ_P0065037 Olfr156 protein_coding protein_coding MGP_CBAJ_T0064983.1 MGP_CBAJ_G0027877.1 mouse_genomes_project 4 44565162 44569883 + MGP_CBAJ_P0064983 Creb3 protein_coding protein_coding MGP_CBAJ_T0064984.1 MGP_CBAJ_G0027877.1 mouse_genomes_project 4 44565642 44569620 + MGP_CBAJ_P0064984 Creb3 protein_coding protein_coding MGP_CBAJ_T0064985.1 MGP_CBAJ_G0027877.1 mouse_genomes_project 4 44565776 44568142 + MGP_CBAJ_P0064985 Creb3 protein_coding protein_coding MGP_CBAJ_T0064986.1 MGP_CBAJ_G0027877.1 mouse_genomes_project 4 44566096 44569350 + Creb3 protein_coding retained_intron MGP_CBAJ_T0064987.1 MGP_CBAJ_G0027877.1 mouse_genomes_project 4 44566259 44568376 + Creb3 protein_coding retained_intron MGP_CBAJ_T0064988.1 MGP_CBAJ_G0027877.1 mouse_genomes_project 4 44568837 44569527 + Creb3 protein_coding retained_intron MGP_CBAJ_T0014434.1 MGP_CBAJ_G0012546.1 mouse_genomes_project 4 90848139 90848542 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004485.1 MGP_CBAJ_G0003894.1 mouse_genomes_project 4 153837383 153851653 + Gm13075 antisense antisense MGP_CBAJ_T0004486.1 MGP_CBAJ_G0003894.1 mouse_genomes_project 4 153837411 153855898 + Gm13075 antisense antisense MGP_CBAJ_T0065364.1 MGP_CBAJ_G0027969.1 mouse_genomes_project 4 56254592 56302403 + MGP_CBAJ_P0065364 Tmem38b protein_coding protein_coding MGP_CBAJ_T0065365.1 MGP_CBAJ_G0027969.1 mouse_genomes_project 4 56254602 56261225 + Tmem38b protein_coding processed_transcript MGP_CBAJ_T0065366.1 MGP_CBAJ_G0027969.1 mouse_genomes_project 4 56254604 56284365 + Tmem38b protein_coding processed_transcript MGP_CBAJ_T0065367.1 MGP_CBAJ_G0027969.1 mouse_genomes_project 4 56276815 56292896 + MGP_CBAJ_P0065367 Tmem38b protein_coding protein_coding MGP_CBAJ_T0066692.1 MGP_CBAJ_G0028277.1 mouse_genomes_project 4 124640505 124707639 - Faah protein_coding retained_intron MGP_CBAJ_T0066693.1 MGP_CBAJ_G0028277.1 mouse_genomes_project 4 124680932 124707680 - Faah protein_coding retained_intron MGP_CBAJ_T0066694.1 MGP_CBAJ_G0028277.1 mouse_genomes_project 4 124680932 124707890 - MGP_CBAJ_P0066694 Faah protein_coding protein_coding MGP_CBAJ_T0066695.1 MGP_CBAJ_G0028277.1 mouse_genomes_project 4 124682456 124707691 - Faah protein_coding retained_intron MGP_CBAJ_T0066696.1 MGP_CBAJ_G0028277.1 mouse_genomes_project 4 124682569 124684332 - Faah protein_coding retained_intron MGP_CBAJ_T0066697.1 MGP_CBAJ_G0028277.1 mouse_genomes_project 4 124682977 124684201 - Faah protein_coding retained_intron MGP_CBAJ_T0066698.1 MGP_CBAJ_G0028277.1 mouse_genomes_project 4 124685988 124707639 - Faah protein_coding processed_transcript MGP_CBAJ_T0066699.1 MGP_CBAJ_G0028277.1 mouse_genomes_project 4 124689993 124707661 - Faah protein_coding processed_transcript MGP_CBAJ_T0065622.1 MGP_CBAJ_G0028041.1 mouse_genomes_project 4 68715145 68969434 + MGP_CBAJ_P0065622 Pappa protein_coding protein_coding MGP_CBAJ_T0066863.1 MGP_CBAJ_G0028308.1 mouse_genomes_project 4 125993794 125999020 - MGP_CBAJ_P0066863 Plk3 protein_coding protein_coding MGP_CBAJ_T0066864.1 MGP_CBAJ_G0028308.1 mouse_genomes_project 4 125993802 125999100 - Plk3 protein_coding processed_transcript MGP_CBAJ_T0014473.1 MGP_CBAJ_G0012585.1 mouse_genomes_project 4 107713537 107714288 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067279.1 MGP_CBAJ_G0028414.1 mouse_genomes_project 4 134383789 134401378 + MGP_CBAJ_P0067279 Sf3a3 protein_coding protein_coding MGP_CBAJ_T0067280.1 MGP_CBAJ_G0028414.1 mouse_genomes_project 4 134383896 134387737 + Sf3a3 protein_coding processed_transcript MGP_CBAJ_T0067281.1 MGP_CBAJ_G0028414.1 mouse_genomes_project 4 134390742 134392392 + Sf3a3 protein_coding processed_transcript MGP_CBAJ_T0069190.1 MGP_CBAJ_G0028851.1 mouse_genomes_project 4 168796746 168832770 + MGP_CBAJ_P0069190 Cep104 protein_coding protein_coding MGP_CBAJ_T0069191.1 MGP_CBAJ_G0028851.1 mouse_genomes_project 4 168809805 168832770 + MGP_CBAJ_P0069191 Cep104 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069192.1 MGP_CBAJ_G0028851.1 mouse_genomes_project 4 168810545 168811416 + Cep104 protein_coding retained_intron MGP_CBAJ_T0014371.1 MGP_CBAJ_G0012483.1 mouse_genomes_project 4 58102157 58102585 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010463.1 MGP_CBAJ_G0008601.1 mouse_genomes_project 4 45356702 45356775 - Mir5106 miRNA miRNA MGP_CBAJ_T0064225.1 MGP_CBAJ_G0027713.1 mouse_genomes_project 4 5061026 5156994 - MGP_CBAJ_P0064225 Car8 protein_coding protein_coding MGP_CBAJ_T0014311.1 MGP_CBAJ_G0012423.1 mouse_genomes_project 4 36073395 36074337 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064199.1 MGP_CBAJ_G0027708.1 mouse_genomes_project 4 2878418 2940645 + MGP_CBAJ_P0064199 Ubxn2b protein_coding protein_coding MGP_CBAJ_T0014571.1 MGP_CBAJ_G0012683.1 mouse_genomes_project 4 140093244 140093532 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099279.1 MGP_CBAJ_G0037534.1 mouse_genomes_project 4 107186114 107186196 + Gm26425 snRNA snRNA MGP_CBAJ_T0065171.1 MGP_CBAJ_G0027915.1 mouse_genomes_project 4 47236982 47256248 + Ccdc180 protein_coding processed_transcript MGP_CBAJ_T0065172.1 MGP_CBAJ_G0027915.1 mouse_genomes_project 4 47236982 47309342 + MGP_CBAJ_P0065172 Ccdc180 protein_coding protein_coding MGP_CBAJ_T0065173.1 MGP_CBAJ_G0027915.1 mouse_genomes_project 4 47237534 47309335 + MGP_CBAJ_P0065173 Ccdc180 protein_coding protein_coding MGP_CBAJ_T0065174.1 MGP_CBAJ_G0027915.1 mouse_genomes_project 4 47263996 47274857 + MGP_CBAJ_P0065174 Ccdc180 protein_coding protein_coding MGP_CBAJ_T0100526.1 MGP_CBAJ_G0038781.1 mouse_genomes_project 4 41978112 41978189 - Gm22888 snoRNA snoRNA MGP_CBAJ_T0068317.1 MGP_CBAJ_G0028641.1 mouse_genomes_project 4 148941270 148987330 - MGP_CBAJ_P0068317 Cdc42 protein_coding protein_coding MGP_CBAJ_T0068318.1 MGP_CBAJ_G0028641.1 mouse_genomes_project 4 148943336 148987309 - MGP_CBAJ_P0068318 Cdc42 protein_coding protein_coding MGP_CBAJ_T0099302.1 MGP_CBAJ_G0037557.1 mouse_genomes_project 4 136999192 136999298 - Gm25600 snRNA snRNA MGP_CBAJ_T0014620.1 MGP_CBAJ_G0012732.1 mouse_genomes_project 4 166667264 166667748 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014387.1 MGP_CBAJ_G0012499.1 mouse_genomes_project 4 70863339 70863708 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004441.1 MGP_CBAJ_G0003859.1 mouse_genomes_project 4 133246111 133248950 + Gm12925 antisense antisense MGP_CBAJ_T0004442.1 MGP_CBAJ_G0003859.1 mouse_genomes_project 4 133247684 133251431 + Gm12925 antisense antisense MGP_CBAJ_T0004443.1 MGP_CBAJ_G0003859.1 mouse_genomes_project 4 133247846 133251438 + Gm12925 antisense antisense MGP_CBAJ_T0068129.1 MGP_CBAJ_G0028594.1 mouse_genomes_project 4 145617322 145774033 - MGP_CBAJ_P0068129 Man1c1 protein_coding protein_coding MGP_CBAJ_T0068130.1 MGP_CBAJ_G0028594.1 mouse_genomes_project 4 145617322 145774033 - MGP_CBAJ_P0068130 Man1c1 protein_coding protein_coding MGP_CBAJ_T0068131.1 MGP_CBAJ_G0028594.1 mouse_genomes_project 4 145623514 145773510 - Man1c1 protein_coding retained_intron MGP_CBAJ_T0069295.1 MGP_CBAJ_G0028870.1 mouse_genomes_project 4 169991330 169996748 + MGP_CBAJ_P0069295 Pex10 protein_coding protein_coding MGP_CBAJ_T0069296.1 MGP_CBAJ_G0028870.1 mouse_genomes_project 4 169991368 169993196 + Pex10 protein_coding processed_transcript MGP_CBAJ_T0069297.1 MGP_CBAJ_G0028870.1 mouse_genomes_project 4 169991371 169996496 + Pex10 protein_coding processed_transcript MGP_CBAJ_T0069298.1 MGP_CBAJ_G0028870.1 mouse_genomes_project 4 169991373 169992338 + Pex10 protein_coding processed_transcript MGP_CBAJ_T0069299.1 MGP_CBAJ_G0028870.1 mouse_genomes_project 4 169991373 169993431 + Pex10 protein_coding processed_transcript MGP_CBAJ_T0066275.1 MGP_CBAJ_G0028194.1 mouse_genomes_project 4 115219547 115231257 - MGP_CBAJ_P0066275 Mrpl37 protein_coding protein_coding MGP_CBAJ_T0066276.1 MGP_CBAJ_G0028194.1 mouse_genomes_project 4 115219558 115223624 - Mrpl37 protein_coding retained_intron MGP_CBAJ_T0066277.1 MGP_CBAJ_G0028194.1 mouse_genomes_project 4 115219641 115229159 - Mrpl37 protein_coding processed_transcript MGP_CBAJ_T0066278.1 MGP_CBAJ_G0028194.1 mouse_genomes_project 4 115219648 115231209 - Mrpl37 protein_coding processed_transcript MGP_CBAJ_T0066279.1 MGP_CBAJ_G0028194.1 mouse_genomes_project 4 115228784 115229746 - Mrpl37 protein_coding retained_intron MGP_CBAJ_T0067797.1 MGP_CBAJ_G0028521.1 mouse_genomes_project 4 142345158 142378034 + MGP_CBAJ_P0067797 Srsf4 protein_coding protein_coding MGP_CBAJ_T0067798.1 MGP_CBAJ_G0028521.1 mouse_genomes_project 4 142345357 142363686 + MGP_CBAJ_P0067798 Srsf4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067799.1 MGP_CBAJ_G0028521.1 mouse_genomes_project 4 142355836 142370707 + MGP_CBAJ_P0067799 Srsf4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067800.1 MGP_CBAJ_G0028521.1 mouse_genomes_project 4 142356749 142378034 + Srsf4 protein_coding retained_intron MGP_CBAJ_T0067801.1 MGP_CBAJ_G0028521.1 mouse_genomes_project 4 142356967 142378035 + MGP_CBAJ_P0067801 Srsf4 protein_coding unknown_likely_coding MGP_CBAJ_T0017795.1 MGP_CBAJ_G0015291.1 mouse_genomes_project 4 60589930 60596178 - Gm12526 processed_transcript processed_transcript MGP_CBAJ_T0007774.1 MGP_CBAJ_G0006350.1 mouse_genomes_project 4 87447931 87478846 - Gm11264 lincRNA lincRNA MGP_CBAJ_T0014429.1 MGP_CBAJ_G0012541.1 mouse_genomes_project 4 88634644 88634845 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014439.1 MGP_CBAJ_G0012551.1 mouse_genomes_project 4 94083992 94084230 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0017828.1 MGP_CBAJ_G0015314.1 mouse_genomes_project 4 128361162 128362801 + Gm12898 processed_transcript processed_transcript MGP_CBAJ_T0014580.1 MGP_CBAJ_G0012692.1 mouse_genomes_project 4 145527033 145527786 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0064989.1 MGP_CBAJ_G0027878.1 mouse_genomes_project 4 44569750 44581374 - Gba2 protein_coding retained_intron MGP_CBAJ_T0064990.1 MGP_CBAJ_G0027878.1 mouse_genomes_project 4 44569750 44580926 - Gba2 protein_coding retained_intron MGP_CBAJ_T0064991.1 MGP_CBAJ_G0027878.1 mouse_genomes_project 4 44569750 44581710 - MGP_CBAJ_P0064991 Gba2 protein_coding protein_coding MGP_CBAJ_T0064992.1 MGP_CBAJ_G0027878.1 mouse_genomes_project 4 44569751 44580926 - Gba2 protein_coding retained_intron MGP_CBAJ_T0064993.1 MGP_CBAJ_G0027878.1 mouse_genomes_project 4 44571216 44572465 - Gba2 protein_coding retained_intron MGP_CBAJ_T0064994.1 MGP_CBAJ_G0027878.1 mouse_genomes_project 4 44573185 44576891 - Gba2 protein_coding processed_transcript MGP_CBAJ_T0064995.1 MGP_CBAJ_G0027878.1 mouse_genomes_project 4 44573598 44581473 - MGP_CBAJ_P0064995 Gba2 protein_coding protein_coding MGP_CBAJ_T0004378.1 MGP_CBAJ_G0003813.1 mouse_genomes_project 4 65961009 65967073 - Gm11209 antisense antisense MGP_CBAJ_T0067821.1 MGP_CBAJ_G0028524.1 mouse_genomes_project 4 142570704 142573000 + MGP_CBAJ_P0067821 Gm10300 protein_coding protein_coding MGP_CBAJ_T0007726.1 MGP_CBAJ_G0006309.1 mouse_genomes_project 4 40948272 40952758 + 4930509K18Rik lincRNA lincRNA MGP_CBAJ_T0099301.1 MGP_CBAJ_G0037556.1 mouse_genomes_project 4 135951964 135952061 - Gm25323 snRNA snRNA MGP_CBAJ_T0065976.1 MGP_CBAJ_G0028123.1 mouse_genomes_project 4 102895299 102938085 - MGP_CBAJ_P0065976 Cyp2j12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065977.1 MGP_CBAJ_G0028123.1 mouse_genomes_project 4 102895556 102938071 - MGP_CBAJ_P0065977 Cyp2j12 protein_coding protein_coding MGP_CBAJ_T0014267.1 MGP_CBAJ_G0012379.1 mouse_genomes_project 4 24068305 24069133 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014511.1 MGP_CBAJ_G0012623.1 mouse_genomes_project 4 120506599 120507593 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064631.1 MGP_CBAJ_G0027810.1 mouse_genomes_project 4 40760839 40823135 + MGP_CBAJ_P0064631 Aco1 protein_coding protein_coding MGP_CBAJ_T0064632.1 MGP_CBAJ_G0027810.1 mouse_genomes_project 4 40781464 40787104 + Aco1 protein_coding processed_transcript MGP_CBAJ_T0064633.1 MGP_CBAJ_G0027810.1 mouse_genomes_project 4 40784620 40793608 + Aco1 protein_coding processed_transcript MGP_CBAJ_T0064634.1 MGP_CBAJ_G0027810.1 mouse_genomes_project 4 40808271 40821201 + Aco1 protein_coding processed_transcript MGP_CBAJ_T0067865.1 MGP_CBAJ_G0028535.1 mouse_genomes_project 4 143136491 143139419 - MGP_CBAJ_P0067865 Atpif1 protein_coding protein_coding MGP_CBAJ_T0067866.1 MGP_CBAJ_G0028535.1 mouse_genomes_project 4 143136491 143139590 - MGP_CBAJ_P0067866 Atpif1 protein_coding protein_coding MGP_CBAJ_T0067867.1 MGP_CBAJ_G0028535.1 mouse_genomes_project 4 143138418 143139526 - Atpif1 protein_coding retained_intron MGP_CBAJ_T0017845.1 MGP_CBAJ_G0015321.1 mouse_genomes_project 4 142915482 142924251 - Snhg3 processed_transcript processed_transcript MGP_CBAJ_T0017846.1 MGP_CBAJ_G0015321.1 mouse_genomes_project 4 142922522 142924274 - Snhg3 processed_transcript processed_transcript MGP_CBAJ_T0017847.1 MGP_CBAJ_G0015321.1 mouse_genomes_project 4 142922523 142923521 - Snhg3 processed_transcript processed_transcript MGP_CBAJ_T0017848.1 MGP_CBAJ_G0015321.1 mouse_genomes_project 4 142922523 142924221 - Snhg3 processed_transcript processed_transcript MGP_CBAJ_T0017849.1 MGP_CBAJ_G0015321.1 mouse_genomes_project 4 142922593 142923924 - Snhg3 processed_transcript processed_transcript MGP_CBAJ_T0065982.1 MGP_CBAJ_G0028128.1 mouse_genomes_project 4 103400688 103425935 - MGP_CBAJ_P0065982 Cyp2j9 protein_coding protein_coding MGP_CBAJ_T0065983.1 MGP_CBAJ_G0028128.1 mouse_genomes_project 4 103408527 103425935 - Cyp2j9 protein_coding retained_intron MGP_CBAJ_T0065942.1 MGP_CBAJ_G0028119.1 mouse_genomes_project 4 101754989 101758177 - MGP_CBAJ_P0065942 Jun protein_coding protein_coding MGP_CBAJ_T0001391.1 MGP_CBAJ_G0001315.1 mouse_genomes_project 4 155519318 155519537 + TEC TEC MGP_CBAJ_T0014490.1 MGP_CBAJ_G0012602.1 mouse_genomes_project 4 114121277 114122801 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007736.1 MGP_CBAJ_G0006318.1 mouse_genomes_project 4 47034619 47035872 + Gm12410 lincRNA lincRNA MGP_CBAJ_T0067584.1 MGP_CBAJ_G0028483.1 mouse_genomes_project 4 139532099 139560099 - MGP_CBAJ_P0067584 Zbtb8a protein_coding protein_coding MGP_CBAJ_T0065047.1 MGP_CBAJ_G0027896.1 mouse_genomes_project 4 45099172 45129806 + MGP_CBAJ_P0065047 Clta protein_coding protein_coding MGP_CBAJ_T0065048.1 MGP_CBAJ_G0027896.1 mouse_genomes_project 4 45109577 45129806 + MGP_CBAJ_P0065048 Clta protein_coding protein_coding MGP_CBAJ_T0065049.1 MGP_CBAJ_G0027896.1 mouse_genomes_project 4 45109582 45129805 + MGP_CBAJ_P0065049 Clta protein_coding protein_coding MGP_CBAJ_T0065050.1 MGP_CBAJ_G0027896.1 mouse_genomes_project 4 45109617 45129806 + MGP_CBAJ_P0065050 Clta protein_coding protein_coding MGP_CBAJ_T0065051.1 MGP_CBAJ_G0027896.1 mouse_genomes_project 4 45109617 45129806 + MGP_CBAJ_P0065051 Clta protein_coding protein_coding MGP_CBAJ_T0065052.1 MGP_CBAJ_G0027896.1 mouse_genomes_project 4 45109625 45129806 + MGP_CBAJ_P0065052 Clta protein_coding protein_coding MGP_CBAJ_T0068511.1 MGP_CBAJ_G0028686.1 mouse_genomes_project 4 152176560 152405006 - MGP_CBAJ_P0068511 Igsf21 protein_coding protein_coding MGP_CBAJ_T0066767.1 MGP_CBAJ_G0028291.1 mouse_genomes_project 4 125352154 125355702 + Ccdc17 protein_coding processed_transcript MGP_CBAJ_T0066768.1 MGP_CBAJ_G0028291.1 mouse_genomes_project 4 125352230 125355767 + MGP_CBAJ_P0066768 Ccdc17 protein_coding protein_coding MGP_CBAJ_T0066769.1 MGP_CBAJ_G0028291.1 mouse_genomes_project 4 125352303 125353701 + Ccdc17 protein_coding processed_transcript MGP_CBAJ_T0066770.1 MGP_CBAJ_G0028291.1 mouse_genomes_project 4 125353260 125355723 + Ccdc17 protein_coding processed_transcript MGP_CBAJ_T0066771.1 MGP_CBAJ_G0028291.1 mouse_genomes_project 4 125353992 125354665 + Ccdc17 protein_coding processed_transcript MGP_CBAJ_T0014505.1 MGP_CBAJ_G0012617.1 mouse_genomes_project 4 118128058 118129202 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0064289.1 MGP_CBAJ_G0027724.1 mouse_genomes_project 4 8455125 8519256 - MGP_CBAJ_P0064289 Ints8 protein_coding protein_coding MGP_CBAJ_T0064290.1 MGP_CBAJ_G0027724.1 mouse_genomes_project 4 8462926 8474165 - Ints8 protein_coding processed_transcript MGP_CBAJ_T0064291.1 MGP_CBAJ_G0027724.1 mouse_genomes_project 4 8463196 8498500 - Ints8 protein_coding processed_transcript MGP_CBAJ_T0064292.1 MGP_CBAJ_G0027724.1 mouse_genomes_project 4 8463198 8519256 - MGP_CBAJ_P0064292 Ints8 protein_coding protein_coding MGP_CBAJ_T0064293.1 MGP_CBAJ_G0027724.1 mouse_genomes_project 4 8463198 8519256 - MGP_CBAJ_P0064293 Ints8 protein_coding protein_coding MGP_CBAJ_T0064294.1 MGP_CBAJ_G0027724.1 mouse_genomes_project 4 8463199 8474732 - Ints8 protein_coding processed_transcript MGP_CBAJ_T0064295.1 MGP_CBAJ_G0027724.1 mouse_genomes_project 4 8467569 8480882 - Ints8 protein_coding processed_transcript MGP_CBAJ_T0064296.1 MGP_CBAJ_G0027724.1 mouse_genomes_project 4 8495521 8498909 - Ints8 protein_coding processed_transcript MGP_CBAJ_T0004526.1 MGP_CBAJ_G0003924.1 mouse_genomes_project 4 169539586 169549403 + antisense antisense MGP_CBAJ_T0067926.1 MGP_CBAJ_G0028548.1 mouse_genomes_project 4 143871657 143959575 + MGP_CBAJ_P0067926 Wasf2 protein_coding protein_coding MGP_CBAJ_T0067927.1 MGP_CBAJ_G0028548.1 mouse_genomes_project 4 143871692 143944980 + MGP_CBAJ_P0067927 Wasf2 protein_coding protein_coding MGP_CBAJ_T0067928.1 MGP_CBAJ_G0028548.1 mouse_genomes_project 4 143871781 143934154 + Wasf2 protein_coding processed_transcript MGP_CBAJ_T0067929.1 MGP_CBAJ_G0028548.1 mouse_genomes_project 4 143933594 143934206 + Wasf2 protein_coding processed_transcript MGP_CBAJ_T0067930.1 MGP_CBAJ_G0028548.1 mouse_genomes_project 4 143933964 143956325 + MGP_CBAJ_P0067930 Wasf2 protein_coding protein_coding MGP_CBAJ_T0067931.1 MGP_CBAJ_G0028548.1 mouse_genomes_project 4 143948936 143950468 + Wasf2 protein_coding processed_transcript MGP_CBAJ_T0004513.1 MGP_CBAJ_G0003913.1 mouse_genomes_project 4 163625530 163627701 - Gm13066 antisense antisense MGP_CBAJ_T0014489.1 MGP_CBAJ_G0012601.1 mouse_genomes_project 4 113550514 113551115 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0065249.1 MGP_CBAJ_G0027934.1 mouse_genomes_project 4 49044996 49053503 - Alg2 protein_coding processed_transcript MGP_CBAJ_T0065250.1 MGP_CBAJ_G0027934.1 mouse_genomes_project 4 49052565 49057112 - MGP_CBAJ_P0065250 Alg2 protein_coding protein_coding MGP_CBAJ_T0065251.1 MGP_CBAJ_G0027934.1 mouse_genomes_project 4 49054626 49056756 - MGP_CBAJ_P0065251 Alg2 protein_coding protein_coding MGP_CBAJ_T0014297.1 MGP_CBAJ_G0012409.1 mouse_genomes_project 4 32303771 32303931 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0068745.1 MGP_CBAJ_G0028766.1 mouse_genomes_project 4 158186293 158421100 - MGP_CBAJ_P0068745 Vps13d protein_coding protein_coding MGP_CBAJ_T0068746.1 MGP_CBAJ_G0028766.1 mouse_genomes_project 4 158186297 158416756 - MGP_CBAJ_P0068746 Vps13d protein_coding protein_coding MGP_CBAJ_T0068747.1 MGP_CBAJ_G0028766.1 mouse_genomes_project 4 158186297 158309001 - MGP_CBAJ_P0068747 Vps13d protein_coding nonsense_mediated_decay MGP_CBAJ_T0068748.1 MGP_CBAJ_G0028766.1 mouse_genomes_project 4 158188317 158379929 - MGP_CBAJ_P0068748 Vps13d protein_coding protein_coding MGP_CBAJ_T0068749.1 MGP_CBAJ_G0028766.1 mouse_genomes_project 4 158188647 158197711 - Vps13d protein_coding processed_transcript MGP_CBAJ_T0068750.1 MGP_CBAJ_G0028766.1 mouse_genomes_project 4 158194028 158271149 - Vps13d protein_coding retained_intron MGP_CBAJ_T0068751.1 MGP_CBAJ_G0028766.1 mouse_genomes_project 4 158232125 158268038 - Vps13d protein_coding processed_transcript MGP_CBAJ_T0068752.1 MGP_CBAJ_G0028766.1 mouse_genomes_project 4 158269985 158275239 - Vps13d protein_coding retained_intron MGP_CBAJ_T0068753.1 MGP_CBAJ_G0028766.1 mouse_genomes_project 4 158287004 158289639 - Vps13d protein_coding retained_intron MGP_CBAJ_T0068754.1 MGP_CBAJ_G0028766.1 mouse_genomes_project 4 158402551 158421090 - Vps13d protein_coding retained_intron MGP_CBAJ_T0004514.1 MGP_CBAJ_G0003914.1 mouse_genomes_project 4 163838947 163839870 + Gm13068 antisense antisense MGP_CBAJ_T0004515.1 MGP_CBAJ_G0003914.1 mouse_genomes_project 4 163838947 163839995 + Gm13068 antisense antisense MGP_CBAJ_T0014283.1 MGP_CBAJ_G0012395.1 mouse_genomes_project 4 27732185 27732944 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100522.1 MGP_CBAJ_G0038777.1 mouse_genomes_project 4 33861667 33861754 + Gm22010 snoRNA snoRNA MGP_CBAJ_T0067341.1 MGP_CBAJ_G0028430.1 mouse_genomes_project 4 135796893 135805490 + MGP_CBAJ_P0067341 Mrps15 protein_coding protein_coding MGP_CBAJ_T0067342.1 MGP_CBAJ_G0028430.1 mouse_genomes_project 4 135796945 135801934 + Mrps15 protein_coding processed_transcript MGP_CBAJ_T0067343.1 MGP_CBAJ_G0028430.1 mouse_genomes_project 4 135797202 135800452 + Mrps15 protein_coding processed_transcript MGP_CBAJ_T0010510.1 MGP_CBAJ_G0008648.1 mouse_genomes_project 4 145496161 145496252 + Gm23634 miRNA miRNA MGP_CBAJ_T0011438.1 MGP_CBAJ_G0009576.1 mouse_genomes_project 4 53674150 53674419 + Gm22563 misc_RNA misc_RNA MGP_CBAJ_T0064397.1 MGP_CBAJ_G0027755.1 mouse_genomes_project 4 17799027 17903064 - MGP_CBAJ_P0064397 Wwp1 protein_coding protein_coding MGP_CBAJ_T0064398.1 MGP_CBAJ_G0027755.1 mouse_genomes_project 4 17800397 17866397 - MGP_CBAJ_P0064398 Wwp1 protein_coding protein_coding MGP_CBAJ_T0065017.1 MGP_CBAJ_G0027883.1 mouse_genomes_project 4 44674275 44679201 - Hint2 protein_coding processed_transcript MGP_CBAJ_T0065018.1 MGP_CBAJ_G0027883.1 mouse_genomes_project 4 44674275 44679196 - Hint2 protein_coding processed_transcript MGP_CBAJ_T0065019.1 MGP_CBAJ_G0027883.1 mouse_genomes_project 4 44674276 44677709 - Hint2 protein_coding processed_transcript MGP_CBAJ_T0065020.1 MGP_CBAJ_G0027883.1 mouse_genomes_project 4 44674277 44677480 - Hint2 protein_coding processed_transcript MGP_CBAJ_T0065021.1 MGP_CBAJ_G0027883.1 mouse_genomes_project 4 44674277 44679219 - MGP_CBAJ_P0065021 Hint2 protein_coding protein_coding MGP_CBAJ_T0065022.1 MGP_CBAJ_G0027883.1 mouse_genomes_project 4 44674278 44679201 - Hint2 protein_coding processed_transcript MGP_CBAJ_T0065023.1 MGP_CBAJ_G0027883.1 mouse_genomes_project 4 44674722 44678496 - Hint2 protein_coding processed_transcript MGP_CBAJ_T0010488.1 MGP_CBAJ_G0008626.1 mouse_genomes_project 4 126499906 126499980 + Gm25559 miRNA miRNA MGP_CBAJ_T0065304.1 MGP_CBAJ_G0027951.1 mouse_genomes_project 4 51495128 51508513 - MGP_CBAJ_P0065304 Tmem246 protein_coding protein_coding MGP_CBAJ_T0065305.1 MGP_CBAJ_G0027951.1 mouse_genomes_project 4 51497388 51508107 - MGP_CBAJ_P0065305 Tmem246 protein_coding protein_coding MGP_CBAJ_T0065306.1 MGP_CBAJ_G0027951.1 mouse_genomes_project 4 51497674 51504524 - MGP_CBAJ_P0065306 Tmem246 protein_coding protein_coding MGP_CBAJ_T0065392.1 MGP_CBAJ_G0027978.1 mouse_genomes_project 4 59540074 59596947 - MGP_CBAJ_P0065392 Ctnnal1 protein_coding protein_coding MGP_CBAJ_T0065393.1 MGP_CBAJ_G0027978.1 mouse_genomes_project 4 59541279 59543458 - Ctnnal1 protein_coding processed_transcript MGP_CBAJ_T0065394.1 MGP_CBAJ_G0027978.1 mouse_genomes_project 4 59546126 59546794 - Ctnnal1 protein_coding processed_transcript MGP_CBAJ_T0065395.1 MGP_CBAJ_G0027978.1 mouse_genomes_project 4 59553161 59567559 - Ctnnal1 protein_coding processed_transcript MGP_CBAJ_T0065396.1 MGP_CBAJ_G0027978.1 mouse_genomes_project 4 59555106 59596927 - Ctnnal1 protein_coding processed_transcript MGP_CBAJ_T0065397.1 MGP_CBAJ_G0027978.1 mouse_genomes_project 4 59555369 59558961 - Ctnnal1 protein_coding processed_transcript MGP_CBAJ_T0065398.1 MGP_CBAJ_G0027978.1 mouse_genomes_project 4 59558632 59567443 - Ctnnal1 protein_coding processed_transcript MGP_CBAJ_T0065399.1 MGP_CBAJ_G0027978.1 mouse_genomes_project 4 59572967 59596913 - MGP_CBAJ_P0065399 Ctnnal1 protein_coding protein_coding MGP_CBAJ_T0065400.1 MGP_CBAJ_G0027978.1 mouse_genomes_project 4 59576935 59578451 - Ctnnal1 protein_coding processed_transcript MGP_CBAJ_T0010491.1 MGP_CBAJ_G0008629.1 mouse_genomes_project 4 130096442 130096531 - Mir30c-1 miRNA miRNA MGP_CBAJ_T0066964.1 MGP_CBAJ_G0028326.1 mouse_genomes_project 4 127116467 127174070 - MGP_CBAJ_P0066964 Kdm4a protein_coding protein_coding MGP_CBAJ_T0066965.1 MGP_CBAJ_G0028326.1 mouse_genomes_project 4 127116469 127173681 - MGP_CBAJ_P0066965 Kdm4a protein_coding protein_coding MGP_CBAJ_T0066966.1 MGP_CBAJ_G0028326.1 mouse_genomes_project 4 127116516 127174005 - MGP_CBAJ_P0066966 Kdm4a protein_coding protein_coding MGP_CBAJ_T0066967.1 MGP_CBAJ_G0028326.1 mouse_genomes_project 4 127127510 127173973 - MGP_CBAJ_P0066967 Kdm4a protein_coding protein_coding MGP_CBAJ_T0066968.1 MGP_CBAJ_G0028326.1 mouse_genomes_project 4 127131252 127132227 - Kdm4a protein_coding processed_transcript MGP_CBAJ_T0066969.1 MGP_CBAJ_G0028326.1 mouse_genomes_project 4 127134518 127147180 - Kdm4a protein_coding processed_transcript MGP_CBAJ_T0100587.1 MGP_CBAJ_G0038842.1 mouse_genomes_project 4 142877480 142877609 + Snora44 snoRNA snoRNA MGP_CBAJ_T0007732.1 MGP_CBAJ_G0006315.1 mouse_genomes_project 4 46155399 46166690 + lincRNA lincRNA MGP_CBAJ_T0007929.1 MGP_CBAJ_G0006466.1 mouse_genomes_project 4 167947042 167947462 + Gm13174 lincRNA lincRNA MGP_CBAJ_T0065209.1 MGP_CBAJ_G0027924.1 mouse_genomes_project 4 47898933 47925016 + MGP_CBAJ_P0065209 Anp32b protein_coding protein_coding MGP_CBAJ_T0007860.1 MGP_CBAJ_G0006414.1 mouse_genomes_project 4 139277976 139279796 + Gm15906 lincRNA lincRNA MGP_CBAJ_T0065406.1 MGP_CBAJ_G0027980.1 mouse_genomes_project 4 59715021 59751842 - MGP_CBAJ_P0065406 Frrs1l protein_coding protein_coding MGP_CBAJ_T0065407.1 MGP_CBAJ_G0027980.1 mouse_genomes_project 4 59717640 59751587 - MGP_CBAJ_P0065407 Frrs1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0000001.1 MGP_CBAJ_G0000001.1 mouse_genomes_project 4 126785502 126819136 - Gm17114 3prime_overlapping_ncRNA 3prime_overlapping_ncRNA MGP_CBAJ_T0066030.1 MGP_CBAJ_G0028139.1 mouse_genomes_project 4 106041355 106055460 + MGP_CBAJ_P0066030 protein_coding protein_coding MGP_CBAJ_T0066031.1 MGP_CBAJ_G0028139.1 mouse_genomes_project 4 106041424 106055460 + MGP_CBAJ_P0066031 protein_coding protein_coding MGP_CBAJ_T0066032.1 MGP_CBAJ_G0028139.1 mouse_genomes_project 4 106041509 106048095 + MGP_CBAJ_P0066032 protein_coding protein_coding MGP_CBAJ_T0066033.1 MGP_CBAJ_G0028139.1 mouse_genomes_project 4 106047921 106050706 + MGP_CBAJ_P0066033 protein_coding protein_coding MGP_CBAJ_T0099248.1 MGP_CBAJ_G0037503.1 mouse_genomes_project 4 33952934 33953042 + Gm25623 snRNA snRNA MGP_CBAJ_T0066085.1 MGP_CBAJ_G0028151.1 mouse_genomes_project 4 108170788 108440046 + MGP_CBAJ_P0066085 Cachd1 protein_coding protein_coding MGP_CBAJ_T0066086.1 MGP_CBAJ_G0028151.1 mouse_genomes_project 4 108170788 108457715 + MGP_CBAJ_P0066086 Cachd1 protein_coding protein_coding MGP_CBAJ_T0066087.1 MGP_CBAJ_G0028151.1 mouse_genomes_project 4 108430071 108438555 + Cachd1 protein_coding processed_transcript MGP_CBAJ_T0066088.1 MGP_CBAJ_G0028151.1 mouse_genomes_project 4 108430170 108438725 + Cachd1 protein_coding processed_transcript MGP_CBAJ_T0064338.1 MGP_CBAJ_G0027735.1 mouse_genomes_project 4 9552341 9570876 - MGP_CBAJ_P0064338 Fam92a protein_coding protein_coding MGP_CBAJ_T0064339.1 MGP_CBAJ_G0027735.1 mouse_genomes_project 4 9552732 9570876 - MGP_CBAJ_P0064339 Fam92a protein_coding protein_coding MGP_CBAJ_T0064340.1 MGP_CBAJ_G0027735.1 mouse_genomes_project 4 9552732 9570856 - MGP_CBAJ_P0064340 Fam92a protein_coding protein_coding MGP_CBAJ_T0064341.1 MGP_CBAJ_G0027735.1 mouse_genomes_project 4 9552819 9560007 - Fam92a protein_coding processed_transcript MGP_CBAJ_T0064342.1 MGP_CBAJ_G0027735.1 mouse_genomes_project 4 9554593 9570029 - MGP_CBAJ_P0064342 Fam92a protein_coding protein_coding MGP_CBAJ_T0064343.1 MGP_CBAJ_G0027735.1 mouse_genomes_project 4 9562981 9570732 - MGP_CBAJ_P0064343 Fam92a protein_coding nonsense_mediated_decay MGP_CBAJ_T0064344.1 MGP_CBAJ_G0027735.1 mouse_genomes_project 4 9564203 9570856 - Fam92a protein_coding retained_intron MGP_CBAJ_T0064345.1 MGP_CBAJ_G0027735.1 mouse_genomes_project 4 9564470 9570595 - Fam92a protein_coding retained_intron MGP_CBAJ_T0004416.1 MGP_CBAJ_G0003838.1 mouse_genomes_project 4 116058716 116061665 - Lrp8os1 antisense antisense MGP_CBAJ_T0004417.1 MGP_CBAJ_G0003838.1 mouse_genomes_project 4 116058737 116061665 - Lrp8os1 antisense antisense MGP_CBAJ_T0066620.1 MGP_CBAJ_G0028257.1 mouse_genomes_project 4 123363327 123409430 + MGP_CBAJ_P0066620 Stil protein_coding protein_coding MGP_CBAJ_T0066621.1 MGP_CBAJ_G0028257.1 mouse_genomes_project 4 123363350 123405624 + MGP_CBAJ_P0066621 Stil protein_coding protein_coding MGP_CBAJ_T0066622.1 MGP_CBAJ_G0028257.1 mouse_genomes_project 4 123363350 123409430 + MGP_CBAJ_P0066622 Stil protein_coding nonsense_mediated_decay MGP_CBAJ_T0066623.1 MGP_CBAJ_G0028257.1 mouse_genomes_project 4 123371740 123381250 + MGP_CBAJ_P0066623 Stil protein_coding nonsense_mediated_decay MGP_CBAJ_T0066624.1 MGP_CBAJ_G0028257.1 mouse_genomes_project 4 123375108 123388623 + Stil protein_coding processed_transcript MGP_CBAJ_T0066625.1 MGP_CBAJ_G0028257.1 mouse_genomes_project 4 123381184 123390186 + Stil protein_coding retained_intron MGP_CBAJ_T0007723.1 MGP_CBAJ_G0006306.1 mouse_genomes_project 4 37167176 37202417 + Gm12371 lincRNA lincRNA MGP_CBAJ_T0064719.1 MGP_CBAJ_G0027831.1 mouse_genomes_project 4 42267519 42283295 + MGP_CBAJ_P0064719 Nudt2 protein_coding protein_coding MGP_CBAJ_T0004371.1 MGP_CBAJ_G0003806.1 mouse_genomes_project 4 54710401 54719805 - Smc2os antisense antisense MGP_CBAJ_T0010454.1 MGP_CBAJ_G0008592.1 mouse_genomes_project 4 24629576 24629686 - Gm26067 miRNA miRNA MGP_CBAJ_T0014296.1 MGP_CBAJ_G0012408.1 mouse_genomes_project 4 32248622 32248997 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014549.1 MGP_CBAJ_G0012661.1 mouse_genomes_project 4 131064942 131065274 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010477.1 MGP_CBAJ_G0008615.1 mouse_genomes_project 4 94166562 94166648 + Mir491 miRNA miRNA MGP_CBAJ_T0014467.1 MGP_CBAJ_G0012579.1 mouse_genomes_project 4 105931472 105931892 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068120.1 MGP_CBAJ_G0028592.1 mouse_genomes_project 4 145570225 145579909 - MGP_CBAJ_P0068120 Mtfr1l protein_coding protein_coding MGP_CBAJ_T0068121.1 MGP_CBAJ_G0028592.1 mouse_genomes_project 4 145570232 145580028 - MGP_CBAJ_P0068121 Mtfr1l protein_coding protein_coding MGP_CBAJ_T0068122.1 MGP_CBAJ_G0028592.1 mouse_genomes_project 4 145570239 145579939 - MGP_CBAJ_P0068122 Mtfr1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0068123.1 MGP_CBAJ_G0028592.1 mouse_genomes_project 4 145573037 145579899 - Mtfr1l protein_coding retained_intron MGP_CBAJ_T0068124.1 MGP_CBAJ_G0028592.1 mouse_genomes_project 4 145573778 145579737 - MGP_CBAJ_P0068124 Mtfr1l protein_coding protein_coding MGP_CBAJ_T0068125.1 MGP_CBAJ_G0028592.1 mouse_genomes_project 4 145573813 145580028 - MGP_CBAJ_P0068125 Mtfr1l protein_coding protein_coding MGP_CBAJ_T0068126.1 MGP_CBAJ_G0028592.1 mouse_genomes_project 4 145573885 145579685 - Mtfr1l protein_coding retained_intron MGP_CBAJ_T0065135.1 MGP_CBAJ_G0027907.1 mouse_genomes_project 4 46568488 46591265 + MGP_CBAJ_P0065135 Trmt10b protein_coding protein_coding MGP_CBAJ_T0065136.1 MGP_CBAJ_G0027907.1 mouse_genomes_project 4 46568516 46575750 + MGP_CBAJ_P0065136 Trmt10b protein_coding protein_coding MGP_CBAJ_T0065137.1 MGP_CBAJ_G0027907.1 mouse_genomes_project 4 46571775 46584938 + Trmt10b protein_coding processed_transcript MGP_CBAJ_T0065138.1 MGP_CBAJ_G0027907.1 mouse_genomes_project 4 46571795 46590276 + Trmt10b protein_coding processed_transcript MGP_CBAJ_T0065139.1 MGP_CBAJ_G0027907.1 mouse_genomes_project 4 46571795 46575747 + Trmt10b protein_coding processed_transcript MGP_CBAJ_T0065140.1 MGP_CBAJ_G0027907.1 mouse_genomes_project 4 46571795 46590276 + MGP_CBAJ_P0065140 Trmt10b protein_coding protein_coding MGP_CBAJ_T0065141.1 MGP_CBAJ_G0027907.1 mouse_genomes_project 4 46589231 46590182 + Trmt10b protein_coding processed_transcript MGP_CBAJ_T0065156.1 MGP_CBAJ_G0027911.1 mouse_genomes_project 4 46715160 46780948 - Shb protein_coding processed_transcript MGP_CBAJ_T0065157.1 MGP_CBAJ_G0027911.1 mouse_genomes_project 4 46715160 46831468 - MGP_CBAJ_P0065157 Shb protein_coding protein_coding MGP_CBAJ_T0065158.1 MGP_CBAJ_G0027911.1 mouse_genomes_project 4 46736584 46790987 - Shb protein_coding processed_transcript MGP_CBAJ_T0065159.1 MGP_CBAJ_G0027911.1 mouse_genomes_project 4 46739384 46787549 - Shb protein_coding retained_intron MGP_CBAJ_T0065160.1 MGP_CBAJ_G0027911.1 mouse_genomes_project 4 46750009 46787940 - MGP_CBAJ_P0065160 Shb protein_coding protein_coding MGP_CBAJ_T0065161.1 MGP_CBAJ_G0027911.1 mouse_genomes_project 4 46750200 46833608 - MGP_CBAJ_P0065161 Shb protein_coding protein_coding MGP_CBAJ_T0004512.1 MGP_CBAJ_G0003912.1 mouse_genomes_project 4 163531269 163536182 + antisense antisense MGP_CBAJ_T0064389.1 MGP_CBAJ_G0027750.1 mouse_genomes_project 4 16957357 17263850 - MGP_CBAJ_P0064389 Cnbd1 protein_coding protein_coding MGP_CBAJ_T0065625.1 MGP_CBAJ_G0028043.1 mouse_genomes_project 4 69242905 69259286 + MGP_CBAJ_P0065625 Trim32 protein_coding protein_coding MGP_CBAJ_T0065626.1 MGP_CBAJ_G0028043.1 mouse_genomes_project 4 69242905 69259286 + MGP_CBAJ_P0065626 Trim32 protein_coding protein_coding MGP_CBAJ_T0065627.1 MGP_CBAJ_G0028043.1 mouse_genomes_project 4 69243168 69256665 + MGP_CBAJ_P0065627 Trim32 protein_coding protein_coding MGP_CBAJ_T0065628.1 MGP_CBAJ_G0028043.1 mouse_genomes_project 4 69243168 69256805 + MGP_CBAJ_P0065628 Trim32 protein_coding protein_coding MGP_CBAJ_T0069449.1 MGP_CBAJ_G0028899.1 mouse_genomes_project 4 170926940 170931659 - MGP_CBAJ_P0069449 Cptp protein_coding protein_coding MGP_CBAJ_T0069450.1 MGP_CBAJ_G0028899.1 mouse_genomes_project 4 170927515 170931581 - Cptp protein_coding processed_transcript MGP_CBAJ_T0069451.1 MGP_CBAJ_G0028899.1 mouse_genomes_project 4 170928582 170931037 - MGP_CBAJ_P0069451 Cptp protein_coding protein_coding MGP_CBAJ_T0064513.1 MGP_CBAJ_G0027782.1 mouse_genomes_project 4 32256654 32272860 + Casp8ap2 protein_coding processed_transcript MGP_CBAJ_T0064514.1 MGP_CBAJ_G0027782.1 mouse_genomes_project 4 32256673 32280563 + Casp8ap2 protein_coding processed_transcript MGP_CBAJ_T0064515.1 MGP_CBAJ_G0027782.1 mouse_genomes_project 4 32256676 32294720 + MGP_CBAJ_P0064515 Casp8ap2 protein_coding protein_coding MGP_CBAJ_T0064516.1 MGP_CBAJ_G0027782.1 mouse_genomes_project 4 32256681 32294720 + MGP_CBAJ_P0064516 Casp8ap2 protein_coding protein_coding MGP_CBAJ_T0064517.1 MGP_CBAJ_G0027782.1 mouse_genomes_project 4 32265150 32294720 + MGP_CBAJ_P0064517 Casp8ap2 protein_coding protein_coding MGP_CBAJ_T0004483.1 MGP_CBAJ_G0003892.1 mouse_genomes_project 4 153475955 153478383 + 4921514A10Rik antisense antisense MGP_CBAJ_T0014454.1 MGP_CBAJ_G0012566.1 mouse_genomes_project 4 99626226 99629153 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099268.1 MGP_CBAJ_G0037523.1 mouse_genomes_project 4 73031442 73031549 + Gm24697 snRNA snRNA MGP_CBAJ_T0004333.1 MGP_CBAJ_G0003776.1 mouse_genomes_project 4 3467080 3484738 + Gm11802 antisense antisense MGP_CBAJ_T0099276.1 MGP_CBAJ_G0037531.1 mouse_genomes_project 4 103773586 103773649 + Gm27579 snRNA snRNA MGP_CBAJ_T0067935.1 MGP_CBAJ_G0028550.1 mouse_genomes_project 4 143971844 143981646 + Cd164l2 protein_coding processed_transcript MGP_CBAJ_T0067936.1 MGP_CBAJ_G0028550.1 mouse_genomes_project 4 143972618 143984118 + MGP_CBAJ_P0067936 Cd164l2 protein_coding unknown_likely_coding MGP_CBAJ_T0067937.1 MGP_CBAJ_G0028550.1 mouse_genomes_project 4 143980686 143984415 + MGP_CBAJ_P0067937 Cd164l2 protein_coding protein_coding MGP_CBAJ_T0067938.1 MGP_CBAJ_G0028550.1 mouse_genomes_project 4 143981323 143984415 + Cd164l2 protein_coding processed_transcript MGP_CBAJ_T0067939.1 MGP_CBAJ_G0028550.1 mouse_genomes_project 4 143981409 143984102 + Cd164l2 protein_coding retained_intron MGP_CBAJ_T0007778.1 MGP_CBAJ_G0006352.1 mouse_genomes_project 4 88926270 88935376 + Gm11184 lincRNA lincRNA MGP_CBAJ_T0014582.1 MGP_CBAJ_G0012694.1 mouse_genomes_project 4 146546132 146546322 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0069023.1 MGP_CBAJ_G0028823.1 mouse_genomes_project 4 165270072 166332620 - MGP_CBAJ_P0069023 Camta1 protein_coding protein_coding MGP_CBAJ_T0069041.1 MGP_CBAJ_G0028823.1 mouse_genomes_project 4 165431900 166332827 - MGP_CBAJ_P0069041 Camta1 protein_coding protein_coding MGP_CBAJ_T0069042.1 MGP_CBAJ_G0028823.1 mouse_genomes_project 4 165431901 166332697 - MGP_CBAJ_P0069042 Camta1 protein_coding protein_coding MGP_CBAJ_T0069043.1 MGP_CBAJ_G0028823.1 mouse_genomes_project 4 165431901 165452164 - MGP_CBAJ_P0069043 Camta1 protein_coding protein_coding MGP_CBAJ_T0069044.1 MGP_CBAJ_G0028823.1 mouse_genomes_project 4 165432189 165503745 - MGP_CBAJ_P0069044 Camta1 protein_coding protein_coding MGP_CBAJ_T0069045.1 MGP_CBAJ_G0028823.1 mouse_genomes_project 4 165432189 165482918 - MGP_CBAJ_P0069045 Camta1 protein_coding protein_coding MGP_CBAJ_T0069046.1 MGP_CBAJ_G0028823.1 mouse_genomes_project 4 165458432 165513769 - Camta1 protein_coding processed_transcript MGP_CBAJ_T0069047.1 MGP_CBAJ_G0028823.1 mouse_genomes_project 4 165458517 165482645 - MGP_CBAJ_P0069047 Camta1 protein_coding protein_coding MGP_CBAJ_T0069049.1 MGP_CBAJ_G0028823.1 mouse_genomes_project 4 165890824 166332601 - Camta1 protein_coding processed_transcript MGP_CBAJ_T0069050.1 MGP_CBAJ_G0028823.1 mouse_genomes_project 4 166252232 166332655 - Camta1 protein_coding processed_transcript MGP_CBAJ_T0069051.1 MGP_CBAJ_G0028823.1 mouse_genomes_project 4 166253896 166332689 - Camta1 protein_coding processed_transcript MGP_CBAJ_T0069052.1 MGP_CBAJ_G0028823.1 mouse_genomes_project 4 166254160 166332620 - MGP_CBAJ_P0069052 Camta1 protein_coding unknown_likely_coding MGP_CBAJ_T0011449.1 MGP_CBAJ_G0009587.1 mouse_genomes_project 4 113978385 113978696 - Gm24363 misc_RNA misc_RNA MGP_CBAJ_T0066420.1 MGP_CBAJ_G0028216.1 mouse_genomes_project 4 116535810 116625676 - MGP_CBAJ_P0066420 Zyg11b protein_coding protein_coding MGP_CBAJ_T0066421.1 MGP_CBAJ_G0028216.1 mouse_genomes_project 4 116547535 116552255 - Zyg11b protein_coding processed_transcript MGP_CBAJ_T0017811.1 MGP_CBAJ_G0015302.1 mouse_genomes_project 4 102241054 102244503 + Gm12707 processed_transcript processed_transcript MGP_CBAJ_T0065024.1 MGP_CBAJ_G0027884.1 mouse_genomes_project 4 44682371 44691774 - MGP_CBAJ_P0065024 Fam221b protein_coding protein_coding MGP_CBAJ_T0065025.1 MGP_CBAJ_G0027884.1 mouse_genomes_project 4 44685845 44691778 - Fam221b protein_coding retained_intron MGP_CBAJ_T0014367.1 MGP_CBAJ_G0012479.1 mouse_genomes_project 4 57801771 57804544 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0065287.1 MGP_CBAJ_G0027943.1 mouse_genomes_project 4 50376766 50388096 + MGP_CBAJ_P0065287 Murc protein_coding protein_coding MGP_CBAJ_T0066486.1 MGP_CBAJ_G0028232.1 mouse_genomes_project 4 117502407 117569725 - MGP_CBAJ_P0066486 Osbpl9 protein_coding protein_coding MGP_CBAJ_T0066487.1 MGP_CBAJ_G0028232.1 mouse_genomes_project 4 117502876 117673014 - MGP_CBAJ_P0066487 Osbpl9 protein_coding protein_coding MGP_CBAJ_T0066488.1 MGP_CBAJ_G0028232.1 mouse_genomes_project 4 117502911 117569739 - MGP_CBAJ_P0066488 Osbpl9 protein_coding protein_coding MGP_CBAJ_T0066489.1 MGP_CBAJ_G0028232.1 mouse_genomes_project 4 117502916 117673052 - MGP_CBAJ_P0066489 Osbpl9 protein_coding protein_coding MGP_CBAJ_T0066490.1 MGP_CBAJ_G0028232.1 mouse_genomes_project 4 117502916 117672997 - MGP_CBAJ_P0066490 Osbpl9 protein_coding protein_coding MGP_CBAJ_T0066491.1 MGP_CBAJ_G0028232.1 mouse_genomes_project 4 117502916 117673014 - MGP_CBAJ_P0066491 Osbpl9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066492.1 MGP_CBAJ_G0028232.1 mouse_genomes_project 4 117503235 117531403 - Osbpl9 protein_coding processed_transcript MGP_CBAJ_T0066493.1 MGP_CBAJ_G0028232.1 mouse_genomes_project 4 117503340 117673052 - MGP_CBAJ_P0066493 Osbpl9 protein_coding protein_coding MGP_CBAJ_T0066494.1 MGP_CBAJ_G0028232.1 mouse_genomes_project 4 117503348 117616118 - MGP_CBAJ_P0066494 Osbpl9 protein_coding protein_coding MGP_CBAJ_T0066495.1 MGP_CBAJ_G0028232.1 mouse_genomes_project 4 117505690 117507243 - Osbpl9 protein_coding processed_transcript MGP_CBAJ_T0066496.1 MGP_CBAJ_G0028232.1 mouse_genomes_project 4 117509262 117513328 - Osbpl9 protein_coding processed_transcript MGP_CBAJ_T0066497.1 MGP_CBAJ_G0028232.1 mouse_genomes_project 4 117509616 117569401 - Osbpl9 protein_coding processed_transcript MGP_CBAJ_T0066498.1 MGP_CBAJ_G0028232.1 mouse_genomes_project 4 117527042 117561480 - Osbpl9 protein_coding processed_transcript MGP_CBAJ_T0066499.1 MGP_CBAJ_G0028232.1 mouse_genomes_project 4 117527166 117616304 - Osbpl9 protein_coding retained_intron MGP_CBAJ_T0066500.1 MGP_CBAJ_G0028232.1 mouse_genomes_project 4 117530355 117532733 - Osbpl9 protein_coding retained_intron MGP_CBAJ_T0066501.1 MGP_CBAJ_G0028232.1 mouse_genomes_project 4 117531363 117559746 - Osbpl9 protein_coding processed_transcript MGP_CBAJ_T0066502.1 MGP_CBAJ_G0028232.1 mouse_genomes_project 4 117531400 117616633 - Osbpl9 protein_coding processed_transcript MGP_CBAJ_T0066503.1 MGP_CBAJ_G0028232.1 mouse_genomes_project 4 117588097 117673016 - Osbpl9 protein_coding processed_transcript MGP_CBAJ_T0066504.1 MGP_CBAJ_G0028232.1 mouse_genomes_project 4 117631417 117673014 - Osbpl9 protein_coding retained_intron MGP_CBAJ_T0064786.1 MGP_CBAJ_G0027845.1 mouse_genomes_project 4 42604239 42605042 - protein_coding processed_transcript MGP_CBAJ_T0064787.1 MGP_CBAJ_G0027845.1 mouse_genomes_project 4 42604239 42608309 - protein_coding processed_transcript MGP_CBAJ_T0064788.1 MGP_CBAJ_G0027845.1 mouse_genomes_project 4 42604239 42608872 - protein_coding processed_transcript MGP_CBAJ_T0064789.1 MGP_CBAJ_G0027845.1 mouse_genomes_project 4 42604239 42608373 - protein_coding processed_transcript MGP_CBAJ_T0064790.1 MGP_CBAJ_G0027845.1 mouse_genomes_project 4 42604239 42606320 - MGP_CBAJ_P0064790 protein_coding protein_coding MGP_CBAJ_T0064791.1 MGP_CBAJ_G0027845.1 mouse_genomes_project 4 42604239 42608869 - MGP_CBAJ_P0064791 protein_coding protein_coding MGP_CBAJ_T0064792.1 MGP_CBAJ_G0027845.1 mouse_genomes_project 4 42604239 42608914 - MGP_CBAJ_P0064792 protein_coding protein_coding MGP_CBAJ_T0064793.1 MGP_CBAJ_G0027845.1 mouse_genomes_project 4 42604239 42604997 - MGP_CBAJ_P0064793 protein_coding protein_coding MGP_CBAJ_T0064796.1 MGP_CBAJ_G0027845.1 mouse_genomes_project 4 42604250 42604985 - MGP_CBAJ_P0064796 protein_coding protein_coding MGP_CBAJ_T0064801.1 MGP_CBAJ_G0027845.1 mouse_genomes_project 4 42604641 42608942 - protein_coding processed_transcript MGP_CBAJ_T0064802.1 MGP_CBAJ_G0027845.1 mouse_genomes_project 4 42604675 42608709 - protein_coding processed_transcript MGP_CBAJ_T0064807.1 MGP_CBAJ_G0027845.1 mouse_genomes_project 4 42607959 42609019 - protein_coding processed_transcript MGP_CBAJ_T0064808.1 MGP_CBAJ_G0027845.1 mouse_genomes_project 4 42607959 42608941 - protein_coding processed_transcript MGP_CBAJ_T0064809.1 MGP_CBAJ_G0027845.1 mouse_genomes_project 4 42607959 42608930 - MGP_CBAJ_P0064809 protein_coding protein_coding MGP_CBAJ_T0064815.1 MGP_CBAJ_G0027845.1 mouse_genomes_project 4 42608186 42608969 - protein_coding processed_transcript MGP_CBAJ_T0064816.1 MGP_CBAJ_G0027845.1 mouse_genomes_project 4 42608248 42609001 - protein_coding processed_transcript MGP_CBAJ_T0101904.1 MGP_CBAJ_G0039935.1 mouse_genomes_project 4 122362472 122363482 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0066865.1 MGP_CBAJ_G0028309.1 mouse_genomes_project 4 126026047 126032312 - MGP_CBAJ_P0066865 Rps8 protein_coding protein_coding MGP_CBAJ_T0066866.1 MGP_CBAJ_G0028309.1 mouse_genomes_project 4 126026054 126026717 - Rps8 protein_coding retained_intron MGP_CBAJ_T0066867.1 MGP_CBAJ_G0028309.1 mouse_genomes_project 4 126026054 126032130 - MGP_CBAJ_P0066867 Rps8 protein_coding unknown_likely_coding MGP_CBAJ_T0066868.1 MGP_CBAJ_G0028309.1 mouse_genomes_project 4 126026054 126028281 - MGP_CBAJ_P0066868 Rps8 protein_coding unknown_likely_coding MGP_CBAJ_T0066869.1 MGP_CBAJ_G0028309.1 mouse_genomes_project 4 126026592 126031250 - Rps8 protein_coding retained_intron MGP_CBAJ_T0066870.1 MGP_CBAJ_G0028309.1 mouse_genomes_project 4 126026611 126032153 - Rps8 protein_coding retained_intron MGP_CBAJ_T0066871.1 MGP_CBAJ_G0028309.1 mouse_genomes_project 4 126026729 126032138 - Rps8 protein_coding retained_intron MGP_CBAJ_T0066872.1 MGP_CBAJ_G0028309.1 mouse_genomes_project 4 126026905 126032141 - Rps8 protein_coding retained_intron MGP_CBAJ_T0067130.1 MGP_CBAJ_G0028371.1 mouse_genomes_project 4 129390372 129396496 + MGP_CBAJ_P0067130 Edn2 protein_coding protein_coding MGP_CBAJ_T0014478.1 MGP_CBAJ_G0012590.1 mouse_genomes_project 4 108821317 108822031 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010469.1 MGP_CBAJ_G0008607.1 mouse_genomes_project 4 59626358 59626428 - Mir32 miRNA miRNA MGP_CBAJ_T0068650.1 MGP_CBAJ_G0028718.1 mouse_genomes_project 4 154308510 154323047 + MGP_CBAJ_P0068650 Agmat protein_coding protein_coding MGP_CBAJ_T0068610.1 MGP_CBAJ_G0028710.1 mouse_genomes_project 4 153894033 153922276 + MGP_CBAJ_P0068610 Zbtb17 protein_coding protein_coding MGP_CBAJ_T0068611.1 MGP_CBAJ_G0028710.1 mouse_genomes_project 4 153894063 153922981 + Zbtb17 protein_coding processed_transcript MGP_CBAJ_T0068612.1 MGP_CBAJ_G0028710.1 mouse_genomes_project 4 153894078 153922276 + Zbtb17 protein_coding processed_transcript MGP_CBAJ_T0068613.1 MGP_CBAJ_G0028710.1 mouse_genomes_project 4 153894085 153914380 + Zbtb17 protein_coding processed_transcript MGP_CBAJ_T0068614.1 MGP_CBAJ_G0028710.1 mouse_genomes_project 4 153918433 153920098 + Zbtb17 protein_coding processed_transcript MGP_CBAJ_T0068615.1 MGP_CBAJ_G0028710.1 mouse_genomes_project 4 153919868 153921119 + Zbtb17 protein_coding processed_transcript MGP_CBAJ_T0068616.1 MGP_CBAJ_G0028710.1 mouse_genomes_project 4 153920465 153922120 + Zbtb17 protein_coding processed_transcript MGP_CBAJ_T0065618.1 MGP_CBAJ_G0028040.1 mouse_genomes_project 4 67438522 67499342 - MGP_CBAJ_P0065618 Tnc protein_coding protein_coding MGP_CBAJ_T0065619.1 MGP_CBAJ_G0028040.1 mouse_genomes_project 4 67438522 67527831 - MGP_CBAJ_P0065619 Tnc protein_coding protein_coding MGP_CBAJ_T0065620.1 MGP_CBAJ_G0028040.1 mouse_genomes_project 4 67438522 67499342 - MGP_CBAJ_P0065620 Tnc protein_coding protein_coding MGP_CBAJ_T0065621.1 MGP_CBAJ_G0028040.1 mouse_genomes_project 4 67491271 67499342 - MGP_CBAJ_P0065621 Tnc protein_coding protein_coding MGP_CBAJ_T0069212.1 MGP_CBAJ_G0028854.1 mouse_genomes_project 4 168850666 168866346 - MGP_CBAJ_P0069212 Ccdc27 protein_coding protein_coding MGP_CBAJ_T0065432.1 MGP_CBAJ_G0027986.1 mouse_genomes_project 4 60741274 60748183 - MGP_CBAJ_P0065432 D630039A03Rik protein_coding protein_coding MGP_CBAJ_T0010507.1 MGP_CBAJ_G0008645.1 mouse_genomes_project 4 144154529 144154618 + Mir5122 miRNA miRNA MGP_CBAJ_T0014240.1 MGP_CBAJ_G0012352.1 mouse_genomes_project 4 14892697 14893670 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004471.1 MGP_CBAJ_G0003882.1 mouse_genomes_project 4 147377723 147378131 - Gm24362 antisense antisense MGP_CBAJ_T0017831.1 MGP_CBAJ_G0015317.1 mouse_genomes_project 4 134650353 134651944 + 9930104L06Rik processed_transcript processed_transcript MGP_CBAJ_T0017832.1 MGP_CBAJ_G0015317.1 mouse_genomes_project 4 134650363 134652760 + 9930104L06Rik processed_transcript retained_intron MGP_CBAJ_T0017833.1 MGP_CBAJ_G0015317.1 mouse_genomes_project 4 134650367 134655725 + 9930104L06Rik processed_transcript processed_transcript MGP_CBAJ_T0017834.1 MGP_CBAJ_G0015317.1 mouse_genomes_project 4 134650370 134657770 + 9930104L06Rik processed_transcript retained_intron MGP_CBAJ_T0017835.1 MGP_CBAJ_G0015317.1 mouse_genomes_project 4 134650379 134657771 + 9930104L06Rik processed_transcript processed_transcript MGP_CBAJ_T0017836.1 MGP_CBAJ_G0015317.1 mouse_genomes_project 4 134652083 134655874 + 9930104L06Rik processed_transcript processed_transcript MGP_CBAJ_T0017837.1 MGP_CBAJ_G0015317.1 mouse_genomes_project 4 134656245 134656979 + 9930104L06Rik processed_transcript processed_transcript MGP_CBAJ_T0014469.1 MGP_CBAJ_G0012581.1 mouse_genomes_project 4 106624930 106625144 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065067.1 MGP_CBAJ_G0027898.1 mouse_genomes_project 4 45249888 45289688 - MGP_CBAJ_P0065067 Rnf38 protein_coding protein_coding MGP_CBAJ_T0065068.1 MGP_CBAJ_G0027898.1 mouse_genomes_project 4 45249891 45289406 - MGP_CBAJ_P0065068 Rnf38 protein_coding protein_coding MGP_CBAJ_T0065069.1 MGP_CBAJ_G0027898.1 mouse_genomes_project 4 45253099 45280615 - MGP_CBAJ_P0065069 Rnf38 protein_coding protein_coding MGP_CBAJ_T0065070.1 MGP_CBAJ_G0027898.1 mouse_genomes_project 4 45253103 45289728 - MGP_CBAJ_P0065070 Rnf38 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065071.1 MGP_CBAJ_G0027898.1 mouse_genomes_project 4 45253185 45262599 - Rnf38 protein_coding processed_transcript MGP_CBAJ_T0065072.1 MGP_CBAJ_G0027898.1 mouse_genomes_project 4 45253187 45262478 - Rnf38 protein_coding processed_transcript MGP_CBAJ_T0065073.1 MGP_CBAJ_G0027898.1 mouse_genomes_project 4 45263985 45290277 - MGP_CBAJ_P0065073 Rnf38 protein_coding protein_coding MGP_CBAJ_T0065074.1 MGP_CBAJ_G0027898.1 mouse_genomes_project 4 45264128 45280726 - MGP_CBAJ_P0065074 Rnf38 protein_coding protein_coding MGP_CBAJ_T0065075.1 MGP_CBAJ_G0027898.1 mouse_genomes_project 4 45264172 45290085 - MGP_CBAJ_P0065075 Rnf38 protein_coding protein_coding MGP_CBAJ_T0065076.1 MGP_CBAJ_G0027898.1 mouse_genomes_project 4 45270769 45289615 - Rnf38 protein_coding processed_transcript MGP_CBAJ_T0065077.1 MGP_CBAJ_G0027898.1 mouse_genomes_project 4 45270776 45363849 - Rnf38 protein_coding processed_transcript MGP_CBAJ_T0065078.1 MGP_CBAJ_G0027898.1 mouse_genomes_project 4 45270805 45290002 - Rnf38 protein_coding processed_transcript MGP_CBAJ_T0065079.1 MGP_CBAJ_G0027898.1 mouse_genomes_project 4 45280644 45289572 - Rnf38 protein_coding processed_transcript MGP_CBAJ_T0100585.1 MGP_CBAJ_G0038840.1 mouse_genomes_project 4 142877003 142877140 + Snora16a snoRNA snoRNA MGP_CBAJ_T0067028.1 MGP_CBAJ_G0028347.1 mouse_genomes_project 4 127963023 127964115 + MGP_CBAJ_P0067028 Olfr1330 protein_coding protein_coding MGP_CBAJ_T0014226.1 MGP_CBAJ_G0012338.1 mouse_genomes_project 4 12762493 12762820 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014340.1 MGP_CBAJ_G0012452.1 mouse_genomes_project 4 47858904 47859227 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011436.1 MGP_CBAJ_G0009574.1 mouse_genomes_project 4 49183894 49184021 + Gm27601 misc_RNA misc_RNA MGP_CBAJ_T0099300.1 MGP_CBAJ_G0037555.1 mouse_genomes_project 4 134363130 134363233 - Gm24480 snRNA snRNA MGP_CBAJ_T0099265.1 MGP_CBAJ_G0037520.1 mouse_genomes_project 4 66984756 66984863 - Gm24448 snRNA snRNA MGP_CBAJ_T0014360.1 MGP_CBAJ_G0012472.1 mouse_genomes_project 4 56083507 56084556 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098385.1 MGP_CBAJ_G0036651.1 mouse_genomes_project 4 88059092 88061374 - Gm11267 sense_intronic sense_intronic MGP_CBAJ_T0066520.1 MGP_CBAJ_G0028235.1 mouse_genomes_project 4 117889461 117911006 + MGP_CBAJ_P0066520 Ttc39a protein_coding protein_coding MGP_CBAJ_T0066521.1 MGP_CBAJ_G0028235.1 mouse_genomes_project 4 117889925 117927566 + MGP_CBAJ_P0066521 Ttc39a protein_coding protein_coding MGP_CBAJ_T0066522.1 MGP_CBAJ_G0028235.1 mouse_genomes_project 4 117889948 117907110 + MGP_CBAJ_P0066522 Ttc39a protein_coding protein_coding MGP_CBAJ_T0066523.1 MGP_CBAJ_G0028235.1 mouse_genomes_project 4 117889967 117905814 + Ttc39a protein_coding processed_transcript MGP_CBAJ_T0066524.1 MGP_CBAJ_G0028235.1 mouse_genomes_project 4 117897629 117911074 + MGP_CBAJ_P0066524 Ttc39a protein_coding protein_coding MGP_CBAJ_T0066525.1 MGP_CBAJ_G0028235.1 mouse_genomes_project 4 117898501 117927203 + MGP_CBAJ_P0066525 Ttc39a protein_coding protein_coding MGP_CBAJ_T0066526.1 MGP_CBAJ_G0028235.1 mouse_genomes_project 4 117898627 117904249 + Ttc39a protein_coding processed_transcript MGP_CBAJ_T0066527.1 MGP_CBAJ_G0028235.1 mouse_genomes_project 4 117903813 117909237 + MGP_CBAJ_P0066527 Ttc39a protein_coding protein_coding MGP_CBAJ_T0007765.1 MGP_CBAJ_G0006341.1 mouse_genomes_project 4 67076358 67081384 + Gm11482 lincRNA lincRNA MGP_CBAJ_T0067948.1 MGP_CBAJ_G0028553.1 mouse_genomes_project 4 144026452 144038412 - MGP_CBAJ_P0067948 Tmem222 protein_coding protein_coding MGP_CBAJ_T0067949.1 MGP_CBAJ_G0028553.1 mouse_genomes_project 4 144027237 144038282 - MGP_CBAJ_P0067949 Tmem222 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067950.1 MGP_CBAJ_G0028553.1 mouse_genomes_project 4 144027283 144038390 - MGP_CBAJ_P0067950 Tmem222 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067951.1 MGP_CBAJ_G0028553.1 mouse_genomes_project 4 144027294 144038238 - MGP_CBAJ_P0067951 Tmem222 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067952.1 MGP_CBAJ_G0028553.1 mouse_genomes_project 4 144027309 144030514 - Tmem222 protein_coding retained_intron MGP_CBAJ_T0067953.1 MGP_CBAJ_G0028553.1 mouse_genomes_project 4 144031289 144038371 - Tmem222 protein_coding retained_intron MGP_CBAJ_T0067168.1 MGP_CBAJ_G0028382.1 mouse_genomes_project 4 130277029 130297988 - MGP_CBAJ_P0067168 Zfp69 protein_coding protein_coding MGP_CBAJ_T0067169.1 MGP_CBAJ_G0028382.1 mouse_genomes_project 4 130277245 130295719 - MGP_CBAJ_P0067169 Zfp69 protein_coding protein_coding MGP_CBAJ_T0067170.1 MGP_CBAJ_G0028382.1 mouse_genomes_project 4 130278198 130294414 - MGP_CBAJ_P0067170 Zfp69 protein_coding protein_coding MGP_CBAJ_T0067171.1 MGP_CBAJ_G0028382.1 mouse_genomes_project 4 130278199 130281579 - Zfp69 protein_coding retained_intron MGP_CBAJ_T0067868.1 MGP_CBAJ_G0028536.1 mouse_genomes_project 4 143141475 143152502 + MGP_CBAJ_P0067868 Dnajc8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067869.1 MGP_CBAJ_G0028536.1 mouse_genomes_project 4 143141475 143163383 + MGP_CBAJ_P0067869 Dnajc8 protein_coding protein_coding MGP_CBAJ_T0067870.1 MGP_CBAJ_G0028536.1 mouse_genomes_project 4 143141492 143163302 + Dnajc8 protein_coding retained_intron MGP_CBAJ_T0067871.1 MGP_CBAJ_G0028536.1 mouse_genomes_project 4 143141501 143150061 + MGP_CBAJ_P0067871 Dnajc8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067872.1 MGP_CBAJ_G0028536.1 mouse_genomes_project 4 143141502 143162838 + MGP_CBAJ_P0067872 Dnajc8 protein_coding protein_coding MGP_CBAJ_T0067873.1 MGP_CBAJ_G0028536.1 mouse_genomes_project 4 143141506 143160025 + MGP_CBAJ_P0067873 Dnajc8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067874.1 MGP_CBAJ_G0028536.1 mouse_genomes_project 4 143141506 143162861 + MGP_CBAJ_P0067874 Dnajc8 protein_coding protein_coding MGP_CBAJ_T0067875.1 MGP_CBAJ_G0028536.1 mouse_genomes_project 4 143141565 143162780 + MGP_CBAJ_P0067875 Dnajc8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067876.1 MGP_CBAJ_G0028536.1 mouse_genomes_project 4 143141584 143163099 + MGP_CBAJ_P0067876 Dnajc8 protein_coding protein_coding MGP_CBAJ_T0067877.1 MGP_CBAJ_G0028536.1 mouse_genomes_project 4 143141953 143150478 + Dnajc8 protein_coding retained_intron MGP_CBAJ_T0067878.1 MGP_CBAJ_G0028536.1 mouse_genomes_project 4 143152514 143162835 + MGP_CBAJ_P0067878 Dnajc8 protein_coding protein_coding MGP_CBAJ_T0067879.1 MGP_CBAJ_G0028536.1 mouse_genomes_project 4 143160958 143163084 + Dnajc8 protein_coding retained_intron MGP_CBAJ_T0014316.1 MGP_CBAJ_G0012428.1 mouse_genomes_project 4 38667942 38668486 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0067083.1 MGP_CBAJ_G0028362.1 mouse_genomes_project 4 128473273 128514058 - Ccdc30 protein_coding retained_intron MGP_CBAJ_T0067084.1 MGP_CBAJ_G0028362.1 mouse_genomes_project 4 128474224 128577488 - MGP_CBAJ_P0067084 Ccdc30 protein_coding protein_coding MGP_CBAJ_T0067085.1 MGP_CBAJ_G0028362.1 mouse_genomes_project 4 128474381 128577283 - MGP_CBAJ_P0067085 Ccdc30 protein_coding unknown_likely_coding MGP_CBAJ_T0067086.1 MGP_CBAJ_G0028362.1 mouse_genomes_project 4 128490562 128507482 - Ccdc30 protein_coding retained_intron MGP_CBAJ_T0067087.1 MGP_CBAJ_G0028362.1 mouse_genomes_project 4 128506619 128540604 - MGP_CBAJ_P0067087 Ccdc30 protein_coding protein_coding MGP_CBAJ_T0067088.1 MGP_CBAJ_G0028362.1 mouse_genomes_project 4 128506620 128513851 - Ccdc30 protein_coding processed_transcript MGP_CBAJ_T0067089.1 MGP_CBAJ_G0028362.1 mouse_genomes_project 4 128507571 128552161 - MGP_CBAJ_P0067089 Ccdc30 protein_coding protein_coding MGP_CBAJ_T0067090.1 MGP_CBAJ_G0028362.1 mouse_genomes_project 4 128513962 128532193 - Ccdc30 protein_coding processed_transcript MGP_CBAJ_T0067091.1 MGP_CBAJ_G0028362.1 mouse_genomes_project 4 128521092 128540678 - Ccdc30 protein_coding processed_transcript MGP_CBAJ_T0067092.1 MGP_CBAJ_G0028362.1 mouse_genomes_project 4 128521094 128534159 - Ccdc30 protein_coding retained_intron MGP_CBAJ_T0067093.1 MGP_CBAJ_G0028362.1 mouse_genomes_project 4 128521102 128540604 - MGP_CBAJ_P0067093 Ccdc30 protein_coding protein_coding MGP_CBAJ_T0067094.1 MGP_CBAJ_G0028362.1 mouse_genomes_project 4 128528431 128540590 - Ccdc30 protein_coding retained_intron MGP_CBAJ_T0067095.1 MGP_CBAJ_G0028362.1 mouse_genomes_project 4 128549945 128559455 - Ccdc30 protein_coding processed_transcript MGP_CBAJ_T0068641.1 MGP_CBAJ_G0028715.1 mouse_genomes_project 4 154147582 154196984 - MGP_CBAJ_P0068641 Plekhm2 protein_coding protein_coding MGP_CBAJ_T0068642.1 MGP_CBAJ_G0028715.1 mouse_genomes_project 4 154147582 154197765 - MGP_CBAJ_P0068642 Plekhm2 protein_coding protein_coding MGP_CBAJ_T0068643.1 MGP_CBAJ_G0028715.1 mouse_genomes_project 4 154150285 154151473 - Plekhm2 protein_coding retained_intron MGP_CBAJ_T0068644.1 MGP_CBAJ_G0028715.1 mouse_genomes_project 4 154152382 154152983 - Plekhm2 protein_coding retained_intron MGP_CBAJ_T0068645.1 MGP_CBAJ_G0028715.1 mouse_genomes_project 4 154154417 154169118 - Plekhm2 protein_coding retained_intron MGP_CBAJ_T0068646.1 MGP_CBAJ_G0028715.1 mouse_genomes_project 4 154168239 154169688 - Plekhm2 protein_coding retained_intron MGP_CBAJ_T0010489.1 MGP_CBAJ_G0008627.1 mouse_genomes_project 4 127201564 127201624 - Mir7226 miRNA miRNA MGP_CBAJ_T0065550.1 MGP_CBAJ_G0028022.1 mouse_genomes_project 4 65795796 65799065 - MGP_CBAJ_P0065550 Hdhd3 protein_coding protein_coding MGP_CBAJ_T0065551.1 MGP_CBAJ_G0028022.1 mouse_genomes_project 4 65796731 65800256 - Hdhd3 protein_coding processed_transcript MGP_CBAJ_T0100576.1 MGP_CBAJ_G0038831.1 mouse_genomes_project 4 132824340 132824471 + Gm25788 snoRNA snoRNA MGP_CBAJ_T0066028.1 MGP_CBAJ_G0028138.1 mouse_genomes_project 4 105886591 105891954 - MGP_CBAJ_P0066028 I0C0044D17Rik protein_coding protein_coding MGP_CBAJ_T0066029.1 MGP_CBAJ_G0028138.1 mouse_genomes_project 4 105887929 105888439 - MGP_CBAJ_P0066029 I0C0044D17Rik protein_coding protein_coding MGP_CBAJ_T0066470.1 MGP_CBAJ_G0028230.1 mouse_genomes_project 4 117294820 117367962 + MGP_CBAJ_P0066470 Rab3b protein_coding protein_coding MGP_CBAJ_T0066471.1 MGP_CBAJ_G0028230.1 mouse_genomes_project 4 117294957 117365830 + MGP_CBAJ_P0066471 Rab3b protein_coding protein_coding MGP_CBAJ_T0066472.1 MGP_CBAJ_G0028230.1 mouse_genomes_project 4 117304778 117365833 + MGP_CBAJ_P0066472 Rab3b protein_coding protein_coding MGP_CBAJ_T0066473.1 MGP_CBAJ_G0028230.1 mouse_genomes_project 4 117363802 117365550 + Rab3b protein_coding processed_transcript MGP_CBAJ_T0069038.1 MGP_CBAJ_G0028826.1 mouse_genomes_project 4 165415801 165430327 - MGP_CBAJ_P0069038 Vamp3 protein_coding protein_coding MGP_CBAJ_T0069039.1 MGP_CBAJ_G0028826.1 mouse_genomes_project 4 165418910 165430320 - Vamp3 protein_coding retained_intron MGP_CBAJ_T0069040.1 MGP_CBAJ_G0028826.1 mouse_genomes_project 4 165428286 165430337 - Vamp3 protein_coding retained_intron MGP_CBAJ_T0064608.1 MGP_CBAJ_G0027804.1 mouse_genomes_project 4 34845845 34861182 + MGP_CBAJ_P0064608 Cga protein_coding protein_coding MGP_CBAJ_T0064609.1 MGP_CBAJ_G0027804.1 mouse_genomes_project 4 34845854 34860944 + MGP_CBAJ_P0064609 Cga protein_coding protein_coding MGP_CBAJ_T0064610.1 MGP_CBAJ_G0027804.1 mouse_genomes_project 4 34845854 34860990 + MGP_CBAJ_P0064610 Cga protein_coding protein_coding MGP_CBAJ_T0064856.1 MGP_CBAJ_G0027862.1 mouse_genomes_project 4 43974396 43982533 - MGP_CBAJ_P0064856 Pigo protein_coding unknown_likely_coding MGP_CBAJ_T0064857.1 MGP_CBAJ_G0027862.1 mouse_genomes_project 4 43974398 43981834 - MGP_CBAJ_P0064857 Pigo protein_coding protein_coding MGP_CBAJ_T0064858.1 MGP_CBAJ_G0027862.1 mouse_genomes_project 4 43974398 43982573 - MGP_CBAJ_P0064858 Pigo protein_coding protein_coding MGP_CBAJ_T0064859.1 MGP_CBAJ_G0027862.1 mouse_genomes_project 4 43974398 43982510 - MGP_CBAJ_P0064859 Pigo protein_coding protein_coding MGP_CBAJ_T0064860.1 MGP_CBAJ_G0027862.1 mouse_genomes_project 4 43974670 43976470 - Pigo protein_coding processed_transcript MGP_CBAJ_T0064861.1 MGP_CBAJ_G0027862.1 mouse_genomes_project 4 43981456 43982221 - Pigo protein_coding processed_transcript MGP_CBAJ_T0014217.1 MGP_CBAJ_G0012329.1 mouse_genomes_project 4 8395342 8395903 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014232.1 MGP_CBAJ_G0012344.1 mouse_genomes_project 4 13708145 13708502 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064689.1 MGP_CBAJ_G0027824.1 mouse_genomes_project 4 41836744 41842197 - MGP_CBAJ_P0064689 Aqp3 protein_coding protein_coding MGP_CBAJ_T0064690.1 MGP_CBAJ_G0027824.1 mouse_genomes_project 4 41837795 41838462 - Aqp3 protein_coding retained_intron MGP_CBAJ_T0068584.1 MGP_CBAJ_G0028702.1 mouse_genomes_project 4 153598463 153604602 + MGP_CBAJ_P0068584 Rsg1 protein_coding protein_coding MGP_CBAJ_T0068585.1 MGP_CBAJ_G0028702.1 mouse_genomes_project 4 153598952 153603128 + Rsg1 protein_coding processed_transcript MGP_CBAJ_T0068586.1 MGP_CBAJ_G0028702.1 mouse_genomes_project 4 153603099 153613616 + Rsg1 protein_coding processed_transcript MGP_CBAJ_T0100570.1 MGP_CBAJ_G0038825.1 mouse_genomes_project 4 126031254 126031358 - Gm26330 snoRNA snoRNA MGP_CBAJ_T0068417.1 MGP_CBAJ_G0028660.1 mouse_genomes_project 4 150386104 150394544 + MGP_CBAJ_P0068417 Camk2n1 protein_coding protein_coding MGP_CBAJ_T0014602.1 MGP_CBAJ_G0012714.1 mouse_genomes_project 4 156290376 156292917 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014512.1 MGP_CBAJ_G0012624.1 mouse_genomes_project 4 120506602 120507593 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0066203.1 MGP_CBAJ_G0028175.1 mouse_genomes_project 4 112663116 112702885 + MGP_CBAJ_P0066203 C8b protein_coding protein_coding MGP_CBAJ_T0066204.1 MGP_CBAJ_G0028175.1 mouse_genomes_project 4 112663189 112702896 + MGP_CBAJ_P0066204 C8b protein_coding protein_coding MGP_CBAJ_T0066205.1 MGP_CBAJ_G0028175.1 mouse_genomes_project 4 112697932 112703265 + C8b protein_coding processed_transcript MGP_CBAJ_T0067904.1 MGP_CBAJ_G0028543.1 mouse_genomes_project 4 143476470 143492526 - MGP_CBAJ_P0067904 Ppp1r8 protein_coding protein_coding MGP_CBAJ_T0067905.1 MGP_CBAJ_G0028543.1 mouse_genomes_project 4 143478308 143482260 - Ppp1r8 protein_coding processed_transcript MGP_CBAJ_T0067906.1 MGP_CBAJ_G0028543.1 mouse_genomes_project 4 143479699 143492481 - Ppp1r8 protein_coding processed_transcript MGP_CBAJ_T0067907.1 MGP_CBAJ_G0028543.1 mouse_genomes_project 4 143483976 143492491 - Ppp1r8 protein_coding processed_transcript MGP_CBAJ_T0007772.1 MGP_CBAJ_G0006348.1 mouse_genomes_project 4 87134246 87138033 + Gm11412 lincRNA lincRNA MGP_CBAJ_T0065449.1 MGP_CBAJ_G0027991.1 mouse_genomes_project 4 61301439 61377328 - MGP_CBAJ_P0065449 Lpar1 protein_coding protein_coding MGP_CBAJ_T0065450.1 MGP_CBAJ_G0027991.1 mouse_genomes_project 4 61301439 61439487 - MGP_CBAJ_P0065450 Lpar1 protein_coding protein_coding MGP_CBAJ_T0065451.1 MGP_CBAJ_G0027991.1 mouse_genomes_project 4 61301439 61439683 - MGP_CBAJ_P0065451 Lpar1 protein_coding protein_coding MGP_CBAJ_T0065452.1 MGP_CBAJ_G0027991.1 mouse_genomes_project 4 61301439 61439420 - MGP_CBAJ_P0065452 Lpar1 protein_coding protein_coding MGP_CBAJ_T0065453.1 MGP_CBAJ_G0027991.1 mouse_genomes_project 4 61301439 61439758 - MGP_CBAJ_P0065453 Lpar1 protein_coding protein_coding MGP_CBAJ_T0065454.1 MGP_CBAJ_G0027991.1 mouse_genomes_project 4 61362525 61434521 - MGP_CBAJ_P0065454 Lpar1 protein_coding protein_coding MGP_CBAJ_T0065455.1 MGP_CBAJ_G0027991.1 mouse_genomes_project 4 61362580 61440028 - MGP_CBAJ_P0065455 Lpar1 protein_coding protein_coding MGP_CBAJ_T0065456.1 MGP_CBAJ_G0027991.1 mouse_genomes_project 4 61362614 61439293 - MGP_CBAJ_P0065456 Lpar1 protein_coding protein_coding MGP_CBAJ_T0066386.1 MGP_CBAJ_G0028211.1 mouse_genomes_project 4 116222658 116279878 + MGP_CBAJ_P0066386 Slc1a7 protein_coding protein_coding MGP_CBAJ_T0066387.1 MGP_CBAJ_G0028211.1 mouse_genomes_project 4 116273435 116279872 + Slc1a7 protein_coding retained_intron MGP_CBAJ_T0014196.1 MGP_CBAJ_G0012308.1 mouse_genomes_project 4 517167 517667 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014385.1 MGP_CBAJ_G0012497.1 mouse_genomes_project 4 70033246 70033584 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0065474.1 MGP_CBAJ_G0027997.1 mouse_genomes_project 4 61945489 61985396 + MGP_CBAJ_P0065474 Gm20503 protein_coding protein_coding MGP_CBAJ_T0014595.1 MGP_CBAJ_G0012707.1 mouse_genomes_project 4 151248003 151248613 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0064394.1 MGP_CBAJ_G0027753.1 mouse_genomes_project 4 17762201 17789388 + MGP_CBAJ_P0064394 Rmdn1 protein_coding protein_coding MGP_CBAJ_T0064395.1 MGP_CBAJ_G0027753.1 mouse_genomes_project 4 17762246 17797657 + MGP_CBAJ_P0064395 Rmdn1 protein_coding protein_coding MGP_CBAJ_T0068833.1 MGP_CBAJ_G0028788.1 mouse_genomes_project 4 162275602 162281979 + Mtor protein_coding retained_intron MGP_CBAJ_T0068834.1 MGP_CBAJ_G0028788.1 mouse_genomes_project 4 162275602 162396987 + MGP_CBAJ_P0068834 Mtor protein_coding protein_coding MGP_CBAJ_T0068835.1 MGP_CBAJ_G0028788.1 mouse_genomes_project 4 162275616 162281983 + MGP_CBAJ_P0068835 Mtor protein_coding protein_coding MGP_CBAJ_T0068837.1 MGP_CBAJ_G0028788.1 mouse_genomes_project 4 162381080 162386960 + Mtor protein_coding retained_intron MGP_CBAJ_T0007836.1 MGP_CBAJ_G0006399.1 mouse_genomes_project 4 133516672 133522877 - Gm26606 lincRNA lincRNA MGP_CBAJ_T0007788.1 MGP_CBAJ_G0006360.1 mouse_genomes_project 4 96461192 96465716 + Gm12629 lincRNA lincRNA MGP_CBAJ_T0099256.1 MGP_CBAJ_G0037511.1 mouse_genomes_project 4 42132147 42132251 - Gm26084 snRNA snRNA MGP_CBAJ_T0010518.1 MGP_CBAJ_G0008656.1 mouse_genomes_project 4 150212250 150212319 - Mir7019 miRNA miRNA MGP_CBAJ_T0068529.1 MGP_CBAJ_G0028689.1 mouse_genomes_project 4 152989724 153005120 - MGP_CBAJ_P0068529 Padi6 protein_coding protein_coding MGP_CBAJ_T0068530.1 MGP_CBAJ_G0028689.1 mouse_genomes_project 4 152994728 152995477 - Padi6 protein_coding processed_transcript MGP_CBAJ_T0068531.1 MGP_CBAJ_G0028689.1 mouse_genomes_project 4 152998157 153004124 - MGP_CBAJ_P0068531 Padi6 protein_coding protein_coding MGP_CBAJ_T0010494.1 MGP_CBAJ_G0008632.1 mouse_genomes_project 4 130319454 130319518 - Mir7015 miRNA miRNA MGP_CBAJ_T0014198.1 MGP_CBAJ_G0012310.1 mouse_genomes_project 4 1577071 1577439 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065933.1 MGP_CBAJ_G0028118.1 mouse_genomes_project 4 101630159 101669303 - MGP_CBAJ_P0065933 Mysm1 protein_coding protein_coding MGP_CBAJ_T0065934.1 MGP_CBAJ_G0028118.1 mouse_genomes_project 4 101630182 101643336 - Mysm1 protein_coding processed_transcript MGP_CBAJ_T0065935.1 MGP_CBAJ_G0028118.1 mouse_genomes_project 4 101635223 101643467 - Mysm1 protein_coding processed_transcript MGP_CBAJ_T0065936.1 MGP_CBAJ_G0028118.1 mouse_genomes_project 4 101654328 101669278 - Mysm1 protein_coding processed_transcript MGP_CBAJ_T0065937.1 MGP_CBAJ_G0028118.1 mouse_genomes_project 4 101655555 101669245 - Mysm1 protein_coding processed_transcript MGP_CBAJ_T0065938.1 MGP_CBAJ_G0028118.1 mouse_genomes_project 4 101655595 101660625 - Mysm1 protein_coding processed_transcript MGP_CBAJ_T0065939.1 MGP_CBAJ_G0028118.1 mouse_genomes_project 4 101655687 101669281 - Mysm1 protein_coding processed_transcript MGP_CBAJ_T0065940.1 MGP_CBAJ_G0028118.1 mouse_genomes_project 4 101660252 101669256 - Mysm1 protein_coding processed_transcript MGP_CBAJ_T0065941.1 MGP_CBAJ_G0028118.1 mouse_genomes_project 4 101662451 101669278 - Mysm1 protein_coding processed_transcript MGP_CBAJ_T0014575.1 MGP_CBAJ_G0012687.1 mouse_genomes_project 4 143541184 143543048 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014453.1 MGP_CBAJ_G0012565.1 mouse_genomes_project 4 99491807 99492297 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007845.1 MGP_CBAJ_G0006404.1 mouse_genomes_project 4 134234100 134239516 + 4933407E24Rik lincRNA lincRNA MGP_CBAJ_T0066222.1 MGP_CBAJ_G0028184.1 mouse_genomes_project 4 114557025 114565825 - MGP_CBAJ_P0066222 Bsnd protein_coding protein_coding MGP_CBAJ_T0066082.1 MGP_CBAJ_G0028149.1 mouse_genomes_project 4 107401223 107813741 + MGP_CBAJ_P0066082 Ror1 protein_coding protein_coding MGP_CBAJ_T0068727.1 MGP_CBAJ_G0028753.1 mouse_genomes_project 4 157461729 157470342 + MGP_CBAJ_P0068727 protein_coding protein_coding MGP_CBAJ_T0014363.1 MGP_CBAJ_G0012475.1 mouse_genomes_project 4 57169372 57169940 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067511.1 MGP_CBAJ_G0028469.1 mouse_genomes_project 4 138850362 138885870 - MGP_CBAJ_P0067511 Zfp362 protein_coding protein_coding MGP_CBAJ_T0067512.1 MGP_CBAJ_G0028469.1 mouse_genomes_project 4 138850378 138872130 - MGP_CBAJ_P0067512 Zfp362 protein_coding protein_coding MGP_CBAJ_T0067513.1 MGP_CBAJ_G0028469.1 mouse_genomes_project 4 138854358 138885870 - MGP_CBAJ_P0067513 Zfp362 protein_coding protein_coding MGP_CBAJ_T0067514.1 MGP_CBAJ_G0028469.1 mouse_genomes_project 4 138866566 138867338 - Zfp362 protein_coding processed_transcript MGP_CBAJ_T0065529.1 MGP_CBAJ_G0028015.1 mouse_genomes_project 4 65641908 65677251 + MGP_CBAJ_P0065529 Slc31a1 protein_coding protein_coding MGP_CBAJ_T0065530.1 MGP_CBAJ_G0028015.1 mouse_genomes_project 4 65668277 65677251 + MGP_CBAJ_P0065530 Slc31a1 protein_coding protein_coding MGP_CBAJ_T0014553.1 MGP_CBAJ_G0012665.1 mouse_genomes_project 4 132998223 132998541 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004410.1 MGP_CBAJ_G0003835.1 mouse_genomes_project 4 115292481 115302145 + Gm12802 antisense antisense MGP_CBAJ_T0067692.1 MGP_CBAJ_G0028503.1 mouse_genomes_project 4 140383958 140427333 + MGP_CBAJ_P0067692 Adgrb2 protein_coding protein_coding MGP_CBAJ_T0067693.1 MGP_CBAJ_G0028503.1 mouse_genomes_project 4 140384241 140427333 + MGP_CBAJ_P0067693 Adgrb2 protein_coding protein_coding MGP_CBAJ_T0067694.1 MGP_CBAJ_G0028503.1 mouse_genomes_project 4 140384345 140427333 + MGP_CBAJ_P0067694 Adgrb2 protein_coding protein_coding MGP_CBAJ_T0067695.1 MGP_CBAJ_G0028503.1 mouse_genomes_project 4 140391130 140427333 + MGP_CBAJ_P0067695 Adgrb2 protein_coding protein_coding MGP_CBAJ_T0067696.1 MGP_CBAJ_G0028503.1 mouse_genomes_project 4 140391131 140427039 + MGP_CBAJ_P0067696 Adgrb2 protein_coding protein_coding MGP_CBAJ_T0067697.1 MGP_CBAJ_G0028503.1 mouse_genomes_project 4 140391131 140427039 + MGP_CBAJ_P0067697 Adgrb2 protein_coding protein_coding MGP_CBAJ_T0067698.1 MGP_CBAJ_G0028503.1 mouse_genomes_project 4 140391131 140427039 + MGP_CBAJ_P0067698 Adgrb2 protein_coding protein_coding MGP_CBAJ_T0067699.1 MGP_CBAJ_G0028503.1 mouse_genomes_project 4 140411952 140416580 + Adgrb2 protein_coding retained_intron MGP_CBAJ_T0067700.1 MGP_CBAJ_G0028503.1 mouse_genomes_project 4 140412145 140417260 + Adgrb2 protein_coding retained_intron MGP_CBAJ_T0067701.1 MGP_CBAJ_G0028503.1 mouse_genomes_project 4 140416914 140417291 + Adgrb2 protein_coding retained_intron MGP_CBAJ_T0067702.1 MGP_CBAJ_G0028503.1 mouse_genomes_project 4 140418353 140419297 + Adgrb2 protein_coding retained_intron MGP_CBAJ_T0067703.1 MGP_CBAJ_G0028503.1 mouse_genomes_project 4 140423477 140426264 + Adgrb2 protein_coding retained_intron MGP_CBAJ_T0067704.1 MGP_CBAJ_G0028503.1 mouse_genomes_project 4 140425815 140427131 + Adgrb2 protein_coding retained_intron MGP_CBAJ_T0004435.1 MGP_CBAJ_G0003853.1 mouse_genomes_project 4 128044517 128045163 - Gm12863 antisense antisense MGP_CBAJ_T0069258.1 MGP_CBAJ_G0028864.1 mouse_genomes_project 4 169775519 169806605 + MGP_CBAJ_P0069258 Mmel1 protein_coding protein_coding MGP_CBAJ_T0069259.1 MGP_CBAJ_G0028864.1 mouse_genomes_project 4 169775519 169806612 + MGP_CBAJ_P0069259 Mmel1 protein_coding protein_coding MGP_CBAJ_T0069260.1 MGP_CBAJ_G0028864.1 mouse_genomes_project 4 169775570 169806612 + MGP_CBAJ_P0069260 Mmel1 protein_coding protein_coding MGP_CBAJ_T0069261.1 MGP_CBAJ_G0028864.1 mouse_genomes_project 4 169777539 169806605 + MGP_CBAJ_P0069261 Mmel1 protein_coding protein_coding MGP_CBAJ_T0069262.1 MGP_CBAJ_G0028864.1 mouse_genomes_project 4 169777573 169806605 + MGP_CBAJ_P0069262 Mmel1 protein_coding protein_coding MGP_CBAJ_T0069263.1 MGP_CBAJ_G0028864.1 mouse_genomes_project 4 169790043 169796759 + MGP_CBAJ_P0069263 Mmel1 protein_coding protein_coding MGP_CBAJ_T0069264.1 MGP_CBAJ_G0028864.1 mouse_genomes_project 4 169803908 169805039 + Mmel1 protein_coding retained_intron MGP_CBAJ_T0069361.1 MGP_CBAJ_G0028880.1 mouse_genomes_project 4 170587415 170623407 + MGP_CBAJ_P0069361 Nadk protein_coding protein_coding MGP_CBAJ_T0069362.1 MGP_CBAJ_G0028880.1 mouse_genomes_project 4 170596303 170623411 + MGP_CBAJ_P0069362 Nadk protein_coding protein_coding MGP_CBAJ_T0069363.1 MGP_CBAJ_G0028880.1 mouse_genomes_project 4 170596429 170609503 + Nadk protein_coding processed_transcript MGP_CBAJ_T0069364.1 MGP_CBAJ_G0028880.1 mouse_genomes_project 4 170596445 170609497 + MGP_CBAJ_P0069364 Nadk protein_coding protein_coding MGP_CBAJ_T0069365.1 MGP_CBAJ_G0028880.1 mouse_genomes_project 4 170596511 170611793 + MGP_CBAJ_P0069365 Nadk protein_coding protein_coding MGP_CBAJ_T0069366.1 MGP_CBAJ_G0028880.1 mouse_genomes_project 4 170596675 170611747 + MGP_CBAJ_P0069366 Nadk protein_coding protein_coding MGP_CBAJ_T0069367.1 MGP_CBAJ_G0028880.1 mouse_genomes_project 4 170614904 170623411 + MGP_CBAJ_P0069367 Nadk protein_coding protein_coding MGP_CBAJ_T0069368.1 MGP_CBAJ_G0028880.1 mouse_genomes_project 4 170619186 170622030 + Nadk protein_coding processed_transcript MGP_CBAJ_T0004380.1 MGP_CBAJ_G0003815.1 mouse_genomes_project 4 76333153 76333835 + Gm11250 antisense antisense MGP_CBAJ_T0004474.1 MGP_CBAJ_G0003885.1 mouse_genomes_project 4 149725263 149726856 - Gm13012 antisense antisense MGP_CBAJ_T0004475.1 MGP_CBAJ_G0003885.1 mouse_genomes_project 4 149725263 149726331 - Gm13012 antisense antisense MGP_CBAJ_T0004476.1 MGP_CBAJ_G0003885.1 mouse_genomes_project 4 149725263 149726845 - Gm13012 antisense antisense MGP_CBAJ_T0064952.1 MGP_CBAJ_G0027873.1 mouse_genomes_project 4 44478996 44480089 - MGP_CBAJ_P0064952 Arhgef39 protein_coding protein_coding MGP_CBAJ_T0064953.1 MGP_CBAJ_G0027873.1 mouse_genomes_project 4 44478996 44482550 - MGP_CBAJ_P0064953 Arhgef39 protein_coding protein_coding MGP_CBAJ_T0064954.1 MGP_CBAJ_G0027873.1 mouse_genomes_project 4 44479000 44482474 - Arhgef39 protein_coding processed_transcript MGP_CBAJ_T0064955.1 MGP_CBAJ_G0027873.1 mouse_genomes_project 4 44479002 44480068 - Arhgef39 protein_coding processed_transcript MGP_CBAJ_T0064956.1 MGP_CBAJ_G0027873.1 mouse_genomes_project 4 44479378 44482516 - Arhgef39 protein_coding processed_transcript MGP_CBAJ_T0064957.1 MGP_CBAJ_G0027873.1 mouse_genomes_project 4 44479675 44482463 - MGP_CBAJ_P0064957 Arhgef39 protein_coding protein_coding MGP_CBAJ_T0064958.1 MGP_CBAJ_G0027873.1 mouse_genomes_project 4 44480074 44481970 - Arhgef39 protein_coding processed_transcript MGP_CBAJ_T0064959.1 MGP_CBAJ_G0027873.1 mouse_genomes_project 4 44480115 44481930 - Arhgef39 protein_coding processed_transcript MGP_CBAJ_T0064960.1 MGP_CBAJ_G0027873.1 mouse_genomes_project 4 44480586 44482466 - Arhgef39 protein_coding processed_transcript MGP_CBAJ_T0064961.1 MGP_CBAJ_G0027873.1 mouse_genomes_project 4 44482001 44482516 - Arhgef39 protein_coding processed_transcript MGP_CBAJ_T0014496.1 MGP_CBAJ_G0012608.1 mouse_genomes_project 4 115907919 115908470 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010502.1 MGP_CBAJ_G0008640.1 mouse_genomes_project 4 140093977 140094103 - Gm28017 miRNA miRNA MGP_CBAJ_T0068778.1 MGP_CBAJ_G0028774.1 mouse_genomes_project 4 161632502 161659364 - MGP_CBAJ_P0068778 Plod1 protein_coding protein_coding MGP_CBAJ_T0068779.1 MGP_CBAJ_G0028774.1 mouse_genomes_project 4 161638367 161643659 - MGP_CBAJ_P0068779 Plod1 protein_coding protein_coding MGP_CBAJ_T0068780.1 MGP_CBAJ_G0028774.1 mouse_genomes_project 4 161645015 161659339 - Plod1 protein_coding retained_intron MGP_CBAJ_T0068781.1 MGP_CBAJ_G0028774.1 mouse_genomes_project 4 161645402 161646295 - Plod1 protein_coding retained_intron MGP_CBAJ_T0068782.1 MGP_CBAJ_G0028774.1 mouse_genomes_project 4 161650241 161659322 - MGP_CBAJ_P0068782 Plod1 protein_coding protein_coding MGP_CBAJ_T0068783.1 MGP_CBAJ_G0028774.1 mouse_genomes_project 4 161654248 161659305 - Plod1 protein_coding processed_transcript MGP_CBAJ_T0064187.1 MGP_CBAJ_G0027705.1 mouse_genomes_project 4 679159 684099 - MGP_CBAJ_P0064187 Penk protein_coding protein_coding MGP_CBAJ_T0064188.1 MGP_CBAJ_G0027705.1 mouse_genomes_project 4 679160 684441 - MGP_CBAJ_P0064188 Penk protein_coding protein_coding MGP_CBAJ_T0017767.1 MGP_CBAJ_G0015275.1 mouse_genomes_project 4 6843558 6903133 + 4930412C18Rik processed_transcript processed_transcript MGP_CBAJ_T0017768.1 MGP_CBAJ_G0015275.1 mouse_genomes_project 4 6843558 6904593 + 4930412C18Rik processed_transcript processed_transcript MGP_CBAJ_T0017769.1 MGP_CBAJ_G0015275.1 mouse_genomes_project 4 6843624 6849933 + 4930412C18Rik processed_transcript processed_transcript MGP_CBAJ_T0017770.1 MGP_CBAJ_G0015275.1 mouse_genomes_project 4 6843652 6855179 + 4930412C18Rik processed_transcript processed_transcript MGP_CBAJ_T0017771.1 MGP_CBAJ_G0015275.1 mouse_genomes_project 4 6843770 6901468 + 4930412C18Rik processed_transcript processed_transcript MGP_CBAJ_T0004467.1 MGP_CBAJ_G0003878.1 mouse_genomes_project 4 145476316 145477744 - 1700021N21Rik antisense antisense MGP_CBAJ_T0014273.1 MGP_CBAJ_G0012385.1 mouse_genomes_project 4 25266771 25267498 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004356.1 MGP_CBAJ_G0003794.1 mouse_genomes_project 4 42461274 42462167 + Gm12405 antisense antisense MGP_CBAJ_T0066744.1 MGP_CBAJ_G0028287.1 mouse_genomes_project 4 125040353 125202553 - MGP_CBAJ_P0066744 Mast2 protein_coding protein_coding MGP_CBAJ_T0066745.1 MGP_CBAJ_G0028287.1 mouse_genomes_project 4 125040354 125202985 - MGP_CBAJ_P0066745 Mast2 protein_coding protein_coding MGP_CBAJ_T0066746.1 MGP_CBAJ_G0028287.1 mouse_genomes_project 4 125040354 125202985 - MGP_CBAJ_P0066746 Mast2 protein_coding protein_coding MGP_CBAJ_T0066747.1 MGP_CBAJ_G0028287.1 mouse_genomes_project 4 125040406 125202717 - MGP_CBAJ_P0066747 Mast2 protein_coding protein_coding MGP_CBAJ_T0066748.1 MGP_CBAJ_G0028287.1 mouse_genomes_project 4 125041599 125042797 - Mast2 protein_coding processed_transcript MGP_CBAJ_T0066749.1 MGP_CBAJ_G0028287.1 mouse_genomes_project 4 125043171 125044393 - Mast2 protein_coding processed_transcript MGP_CBAJ_T0066750.1 MGP_CBAJ_G0028287.1 mouse_genomes_project 4 125043203 125044240 - Mast2 protein_coding processed_transcript MGP_CBAJ_T0066751.1 MGP_CBAJ_G0028287.1 mouse_genomes_project 4 125045882 125049668 - Mast2 protein_coding processed_transcript MGP_CBAJ_T0066752.1 MGP_CBAJ_G0028287.1 mouse_genomes_project 4 125046444 125051352 - Mast2 protein_coding processed_transcript MGP_CBAJ_T0066753.1 MGP_CBAJ_G0028287.1 mouse_genomes_project 4 125051311 125061376 - Mast2 protein_coding processed_transcript MGP_CBAJ_T0066754.1 MGP_CBAJ_G0028287.1 mouse_genomes_project 4 125053440 125064255 - Mast2 protein_coding processed_transcript MGP_CBAJ_T0066755.1 MGP_CBAJ_G0028287.1 mouse_genomes_project 4 125056025 125143399 - MGP_CBAJ_P0066755 Mast2 protein_coding protein_coding MGP_CBAJ_T0066756.1 MGP_CBAJ_G0028287.1 mouse_genomes_project 4 125061196 125143415 - MGP_CBAJ_P0066756 Mast2 protein_coding protein_coding MGP_CBAJ_T0066757.1 MGP_CBAJ_G0028287.1 mouse_genomes_project 4 125066501 125144220 - Mast2 protein_coding processed_transcript MGP_CBAJ_T0066758.1 MGP_CBAJ_G0028287.1 mouse_genomes_project 4 125066790 125174347 - Mast2 protein_coding processed_transcript MGP_CBAJ_T0017812.1 MGP_CBAJ_G0015303.1 mouse_genomes_project 4 102753012 102765112 - 9530080O11Rik processed_transcript processed_transcript MGP_CBAJ_T0017813.1 MGP_CBAJ_G0015303.1 mouse_genomes_project 4 102753540 102762894 - 9530080O11Rik processed_transcript processed_transcript MGP_CBAJ_T0068512.1 MGP_CBAJ_G0028687.1 mouse_genomes_project 4 152714976 152869612 - MGP_CBAJ_P0068512 Arhgef10l protein_coding protein_coding MGP_CBAJ_T0068513.1 MGP_CBAJ_G0028687.1 mouse_genomes_project 4 152714976 152896168 - MGP_CBAJ_P0068513 Arhgef10l protein_coding protein_coding MGP_CBAJ_T0068514.1 MGP_CBAJ_G0028687.1 mouse_genomes_project 4 152714976 152783384 - MGP_CBAJ_P0068514 Arhgef10l protein_coding nonsense_mediated_decay MGP_CBAJ_T0068515.1 MGP_CBAJ_G0028687.1 mouse_genomes_project 4 152714976 152788176 - MGP_CBAJ_P0068515 Arhgef10l protein_coding protein_coding MGP_CBAJ_T0068516.1 MGP_CBAJ_G0028687.1 mouse_genomes_project 4 152714976 152790760 - MGP_CBAJ_P0068516 Arhgef10l protein_coding protein_coding MGP_CBAJ_T0068517.1 MGP_CBAJ_G0028687.1 mouse_genomes_project 4 152714976 152869612 - MGP_CBAJ_P0068517 Arhgef10l protein_coding protein_coding MGP_CBAJ_T0068518.1 MGP_CBAJ_G0028687.1 mouse_genomes_project 4 152714976 152869618 - MGP_CBAJ_P0068518 Arhgef10l protein_coding protein_coding MGP_CBAJ_T0068519.1 MGP_CBAJ_G0028687.1 mouse_genomes_project 4 152745096 152771376 - MGP_CBAJ_P0068519 Arhgef10l protein_coding nonsense_mediated_decay MGP_CBAJ_T0068520.1 MGP_CBAJ_G0028687.1 mouse_genomes_project 4 152781715 152788160 - MGP_CBAJ_P0068520 Arhgef10l protein_coding protein_coding MGP_CBAJ_T0068521.1 MGP_CBAJ_G0028687.1 mouse_genomes_project 4 152787222 152798610 - Arhgef10l protein_coding retained_intron MGP_CBAJ_T0068522.1 MGP_CBAJ_G0028687.1 mouse_genomes_project 4 152798501 152870222 - MGP_CBAJ_P0068522 Arhgef10l protein_coding protein_coding MGP_CBAJ_T0068523.1 MGP_CBAJ_G0028687.1 mouse_genomes_project 4 152799738 152827125 - MGP_CBAJ_P0068523 Arhgef10l protein_coding protein_coding MGP_CBAJ_T0014307.1 MGP_CBAJ_G0012419.1 mouse_genomes_project 4 34877043 34878394 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0067724.1 MGP_CBAJ_G0028507.1 mouse_genomes_project 4 140587108 140597680 - MGP_CBAJ_P0067724 Tinagl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067725.1 MGP_CBAJ_G0028507.1 mouse_genomes_project 4 140588256 140597680 - MGP_CBAJ_P0067725 Tinagl1 protein_coding protein_coding MGP_CBAJ_T0067726.1 MGP_CBAJ_G0028507.1 mouse_genomes_project 4 140588258 140589266 - Tinagl1 protein_coding retained_intron MGP_CBAJ_T0067727.1 MGP_CBAJ_G0028507.1 mouse_genomes_project 4 140588258 140597670 - MGP_CBAJ_P0067727 Tinagl1 protein_coding protein_coding MGP_CBAJ_T0067728.1 MGP_CBAJ_G0028507.1 mouse_genomes_project 4 140588373 140598000 - MGP_CBAJ_P0067728 Tinagl1 protein_coding protein_coding MGP_CBAJ_T0067729.1 MGP_CBAJ_G0028507.1 mouse_genomes_project 4 140589631 140592140 - Tinagl1 protein_coding retained_intron MGP_CBAJ_T0067730.1 MGP_CBAJ_G0028507.1 mouse_genomes_project 4 140591768 140597569 - MGP_CBAJ_P0067730 Tinagl1 protein_coding protein_coding MGP_CBAJ_T0067731.1 MGP_CBAJ_G0028507.1 mouse_genomes_project 4 140594284 140597670 - Tinagl1 protein_coding processed_transcript MGP_CBAJ_T0067732.1 MGP_CBAJ_G0028507.1 mouse_genomes_project 4 140596587 140597698 - Tinagl1 protein_coding retained_intron MGP_CBAJ_T0067024.1 MGP_CBAJ_G0028343.1 mouse_genomes_project 4 127798301 127799243 - MGP_CBAJ_P0067024 Olfr1338 protein_coding protein_coding MGP_CBAJ_T0064476.1 MGP_CBAJ_G0027773.1 mouse_genomes_project 4 23674618 23720462 + Gpr63 protein_coding processed_transcript MGP_CBAJ_T0064477.1 MGP_CBAJ_G0027773.1 mouse_genomes_project 4 23683475 23722395 + MGP_CBAJ_P0064477 Gpr63 protein_coding protein_coding MGP_CBAJ_T0007920.1 MGP_CBAJ_G0006457.1 mouse_genomes_project 4 162612980 162615862 + Gm13203 lincRNA lincRNA MGP_CBAJ_T0068740.1 MGP_CBAJ_G0028765.1 mouse_genomes_project 4 158096773 158129546 + Dhrs3 protein_coding processed_transcript MGP_CBAJ_T0068741.1 MGP_CBAJ_G0028765.1 mouse_genomes_project 4 158096779 158129472 + MGP_CBAJ_P0068741 Dhrs3 protein_coding protein_coding MGP_CBAJ_T0068742.1 MGP_CBAJ_G0028765.1 mouse_genomes_project 4 158096861 158140256 + MGP_CBAJ_P0068742 Dhrs3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068743.1 MGP_CBAJ_G0028765.1 mouse_genomes_project 4 158097157 158140266 + MGP_CBAJ_P0068743 Dhrs3 protein_coding protein_coding MGP_CBAJ_T0068744.1 MGP_CBAJ_G0028765.1 mouse_genomes_project 4 158128448 158129546 + Dhrs3 protein_coding retained_intron MGP_CBAJ_T0014539.1 MGP_CBAJ_G0012651.1 mouse_genomes_project 4 128703259 128704216 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100513.1 MGP_CBAJ_G0038768.1 mouse_genomes_project 4 4741611 4741743 + Gm23860 snoRNA snoRNA MGP_CBAJ_T0067864.1 MGP_CBAJ_G0028534.1 mouse_genomes_project 4 143085844 143110554 - MGP_CBAJ_P0067864 Sesn2 protein_coding protein_coding MGP_CBAJ_T0014305.1 MGP_CBAJ_G0012417.1 mouse_genomes_project 4 34346560 34346852 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0065298.1 MGP_CBAJ_G0027948.1 mouse_genomes_project 4 51402926 51411424 - MGP_CBAJ_P0065298 Mrpl50 protein_coding protein_coding MGP_CBAJ_T0069525.1 MGP_CBAJ_G0028915.1 mouse_genomes_project 4 171347453 171354534 - MGP_CBAJ_P0069525 Plekhn1 protein_coding protein_coding MGP_CBAJ_T0069526.1 MGP_CBAJ_G0028915.1 mouse_genomes_project 4 171347776 171354483 - MGP_CBAJ_P0069526 Plekhn1 protein_coding unknown_likely_coding MGP_CBAJ_T0064707.1 MGP_CBAJ_G0027829.1 mouse_genomes_project 4 42137316 42185227 + MGP_CBAJ_P0064707 Ubap1 protein_coding protein_coding MGP_CBAJ_T0064708.1 MGP_CBAJ_G0027829.1 mouse_genomes_project 4 42137316 42184468 + MGP_CBAJ_P0064708 Ubap1 protein_coding protein_coding MGP_CBAJ_T0064709.1 MGP_CBAJ_G0027829.1 mouse_genomes_project 4 42137368 42163252 + Ubap1 protein_coding processed_transcript MGP_CBAJ_T0064710.1 MGP_CBAJ_G0027829.1 mouse_genomes_project 4 42163214 42174115 + Ubap1 protein_coding processed_transcript MGP_CBAJ_T0064711.1 MGP_CBAJ_G0027829.1 mouse_genomes_project 4 42163691 42183394 + MGP_CBAJ_P0064711 Ubap1 protein_coding protein_coding MGP_CBAJ_T0099269.1 MGP_CBAJ_G0037524.1 mouse_genomes_project 4 88822677 88822784 - Gm23412 snRNA snRNA MGP_CBAJ_T0068786.1 MGP_CBAJ_G0028777.1 mouse_genomes_project 4 161727610 161728970 + MGP_CBAJ_P0068786 Nppa protein_coding protein_coding MGP_CBAJ_T0099267.1 MGP_CBAJ_G0037522.1 mouse_genomes_project 4 72025699 72025870 + Gm23738 snRNA snRNA MGP_CBAJ_T0010506.1 MGP_CBAJ_G0008644.1 mouse_genomes_project 4 143955475 143955537 + Mir7017 miRNA miRNA MGP_CBAJ_T0069347.1 MGP_CBAJ_G0028878.1 mouse_genomes_project 4 170478113 170479415 + Tmem52 protein_coding retained_intron MGP_CBAJ_T0069348.1 MGP_CBAJ_G0028878.1 mouse_genomes_project 4 170478113 170479858 + MGP_CBAJ_P0069348 Tmem52 protein_coding protein_coding MGP_CBAJ_T0069349.1 MGP_CBAJ_G0028878.1 mouse_genomes_project 4 170478113 170479858 + MGP_CBAJ_P0069349 Tmem52 protein_coding protein_coding MGP_CBAJ_T0069350.1 MGP_CBAJ_G0028878.1 mouse_genomes_project 4 170478130 170479857 + MGP_CBAJ_P0069350 Tmem52 protein_coding protein_coding MGP_CBAJ_T0069351.1 MGP_CBAJ_G0028878.1 mouse_genomes_project 4 170478146 170479789 + Tmem52 protein_coding retained_intron MGP_CBAJ_T0017810.1 MGP_CBAJ_G0015301.1 mouse_genomes_project 4 102217267 102244496 - Gm830 processed_transcript processed_transcript MGP_CBAJ_T0014274.1 MGP_CBAJ_G0012386.1 mouse_genomes_project 4 25335297 25335514 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065931.1 MGP_CBAJ_G0028117.1 mouse_genomes_project 4 101599125 101617835 - MGP_CBAJ_P0065931 Eqtn protein_coding protein_coding MGP_CBAJ_T0065932.1 MGP_CBAJ_G0028117.1 mouse_genomes_project 4 101599289 101617786 - MGP_CBAJ_P0065932 Eqtn protein_coding protein_coding MGP_CBAJ_T0017789.1 MGP_CBAJ_G0015286.1 mouse_genomes_project 4 45197669 45216872 + Gm12503 processed_transcript processed_transcript MGP_CBAJ_T0066083.1 MGP_CBAJ_G0028150.1 mouse_genomes_project 4 107847097 107925261 + MGP_CBAJ_P0066083 Ube2u protein_coding protein_coding MGP_CBAJ_T0066084.1 MGP_CBAJ_G0028150.1 mouse_genomes_project 4 107847115 107925259 + MGP_CBAJ_P0066084 Ube2u protein_coding protein_coding MGP_CBAJ_T0014211.1 MGP_CBAJ_G0012323.1 mouse_genomes_project 4 7069512 7070175 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014201.1 MGP_CBAJ_G0012313.1 mouse_genomes_project 4 2746264 2747018 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0067944.1 MGP_CBAJ_G0028552.1 mouse_genomes_project 4 144013479 144023524 - MGP_CBAJ_P0067944 Sytl1 protein_coding protein_coding MGP_CBAJ_T0067945.1 MGP_CBAJ_G0028552.1 mouse_genomes_project 4 144013479 144023498 - MGP_CBAJ_P0067945 Sytl1 protein_coding protein_coding MGP_CBAJ_T0067946.1 MGP_CBAJ_G0028552.1 mouse_genomes_project 4 144013487 144023498 - Sytl1 protein_coding processed_transcript MGP_CBAJ_T0067947.1 MGP_CBAJ_G0028552.1 mouse_genomes_project 4 144013550 144023463 - Sytl1 protein_coding processed_transcript MGP_CBAJ_T0067394.1 MGP_CBAJ_G0028441.1 mouse_genomes_project 4 136088934 136092502 - MGP_CBAJ_P0067394 Tekt2 protein_coding protein_coding MGP_CBAJ_T0067395.1 MGP_CBAJ_G0028441.1 mouse_genomes_project 4 136088936 136092013 - MGP_CBAJ_P0067395 Tekt2 protein_coding protein_coding MGP_CBAJ_T0067396.1 MGP_CBAJ_G0028441.1 mouse_genomes_project 4 136090521 136092444 - Tekt2 protein_coding retained_intron MGP_CBAJ_T0067397.1 MGP_CBAJ_G0028441.1 mouse_genomes_project 4 136091153 136092457 - MGP_CBAJ_P0067397 Tekt2 protein_coding protein_coding MGP_CBAJ_T0067398.1 MGP_CBAJ_G0028441.1 mouse_genomes_project 4 136091697 136092249 - MGP_CBAJ_P0067398 Tekt2 protein_coding protein_coding MGP_CBAJ_T0068993.1 MGP_CBAJ_G0028817.1 mouse_genomes_project 4 164439921 164451718 + MGP_CBAJ_P0068993 protein_coding unknown_likely_coding MGP_CBAJ_T0068994.1 MGP_CBAJ_G0028817.1 mouse_genomes_project 4 164440050 164448232 + protein_coding retained_intron MGP_CBAJ_T0068995.1 MGP_CBAJ_G0028817.1 mouse_genomes_project 4 164440053 164442755 + protein_coding retained_intron MGP_CBAJ_T0068996.1 MGP_CBAJ_G0028817.1 mouse_genomes_project 4 164448989 164470290 + MGP_CBAJ_P0068996 protein_coding protein_coding MGP_CBAJ_T0068997.1 MGP_CBAJ_G0028817.1 mouse_genomes_project 4 164449738 164465050 + protein_coding retained_intron MGP_CBAJ_T0068998.1 MGP_CBAJ_G0028817.1 mouse_genomes_project 4 164464568 164465715 + protein_coding retained_intron MGP_CBAJ_T0068999.1 MGP_CBAJ_G0028817.1 mouse_genomes_project 4 164465617 164466367 + protein_coding retained_intron MGP_CBAJ_T0068083.1 MGP_CBAJ_G0028581.1 mouse_genomes_project 4 145228625 145231724 + MGP_CBAJ_P0068083 Gm30191 protein_coding protein_coding MGP_CBAJ_T0068322.1 MGP_CBAJ_G0028644.1 mouse_genomes_project 4 149159137 149161298 + MGP_CBAJ_P0068322 1700013G24Rik protein_coding protein_coding MGP_CBAJ_T0066809.1 MGP_CBAJ_G0028298.1 mouse_genomes_project 4 125599021 125614802 - MGP_CBAJ_P0066809 Toe1 protein_coding protein_coding MGP_CBAJ_T0066810.1 MGP_CBAJ_G0028298.1 mouse_genomes_project 4 125611254 125614894 - MGP_CBAJ_P0066810 Toe1 protein_coding protein_coding MGP_CBAJ_T0066811.1 MGP_CBAJ_G0028298.1 mouse_genomes_project 4 125611264 125612446 - Toe1 protein_coding processed_transcript MGP_CBAJ_T0066812.1 MGP_CBAJ_G0028298.1 mouse_genomes_project 4 125611927 125612859 - Toe1 protein_coding retained_intron MGP_CBAJ_T0066813.1 MGP_CBAJ_G0028298.1 mouse_genomes_project 4 125612035 125613777 - MGP_CBAJ_P0066813 Toe1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066814.1 MGP_CBAJ_G0028298.1 mouse_genomes_project 4 125612529 125613854 - Toe1 protein_coding retained_intron MGP_CBAJ_T0066815.1 MGP_CBAJ_G0028298.1 mouse_genomes_project 4 125612964 125614860 - Toe1 protein_coding processed_transcript MGP_CBAJ_T0066816.1 MGP_CBAJ_G0028298.1 mouse_genomes_project 4 125613070 125614802 - Toe1 protein_coding retained_intron MGP_CBAJ_T0065885.1 MGP_CBAJ_G0028101.1 mouse_genomes_project 4 95005626 95006124 - MGP_CBAJ_P0065885 4930553M12Rik protein_coding protein_coding MGP_CBAJ_T0014614.1 MGP_CBAJ_G0012726.1 mouse_genomes_project 4 163556361 163556780 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0069402.1 MGP_CBAJ_G0028889.1 mouse_genomes_project 4 170785663 170810340 - MGP_CBAJ_P0069402 Atad3a protein_coding protein_coding MGP_CBAJ_T0069403.1 MGP_CBAJ_G0028889.1 mouse_genomes_project 4 170785856 170791373 - Atad3a protein_coding retained_intron MGP_CBAJ_T0069404.1 MGP_CBAJ_G0028889.1 mouse_genomes_project 4 170791095 170796123 - Atad3a protein_coding retained_intron MGP_CBAJ_T0069405.1 MGP_CBAJ_G0028889.1 mouse_genomes_project 4 170792229 170795991 - Atad3a protein_coding retained_intron MGP_CBAJ_T0069406.1 MGP_CBAJ_G0028889.1 mouse_genomes_project 4 170797015 170805329 - MGP_CBAJ_P0069406 Atad3a protein_coding nonsense_mediated_decay MGP_CBAJ_T0069407.1 MGP_CBAJ_G0028889.1 mouse_genomes_project 4 170797317 170804020 - MGP_CBAJ_P0069407 Atad3a protein_coding nonsense_mediated_decay MGP_CBAJ_T0069408.1 MGP_CBAJ_G0028889.1 mouse_genomes_project 4 170798297 170810175 - MGP_CBAJ_P0069408 Atad3a protein_coding nonsense_mediated_decay MGP_CBAJ_T0069409.1 MGP_CBAJ_G0028889.1 mouse_genomes_project 4 170802868 170810315 - MGP_CBAJ_P0069409 Atad3a protein_coding nonsense_mediated_decay MGP_CBAJ_T0069410.1 MGP_CBAJ_G0028889.1 mouse_genomes_project 4 170805090 170810334 - Atad3a protein_coding retained_intron MGP_CBAJ_T0014498.1 MGP_CBAJ_G0012610.1 mouse_genomes_project 4 116641118 116641914 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067184.1 MGP_CBAJ_G0028388.1 mouse_genomes_project 4 130716059 130724619 - MGP_CBAJ_P0067184 protein_coding protein_coding MGP_CBAJ_T0004530.1 MGP_CBAJ_G0003927.1 mouse_genomes_project 4 170320653 170321436 + Gm27200 antisense antisense MGP_CBAJ_T0068132.1 MGP_CBAJ_G0028595.1 mouse_genomes_project 4 145820650 145847100 - MGP_CBAJ_P0068132 Ldlrap1 protein_coding protein_coding MGP_CBAJ_T0068133.1 MGP_CBAJ_G0028595.1 mouse_genomes_project 4 145825669 145829201 - Ldlrap1 protein_coding retained_intron MGP_CBAJ_T0068134.1 MGP_CBAJ_G0028595.1 mouse_genomes_project 4 145828509 145829943 - Ldlrap1 protein_coding retained_intron MGP_CBAJ_T0068327.1 MGP_CBAJ_G0028647.1 mouse_genomes_project 4 149349772 149366627 + MGP_CBAJ_P0068327 Usp48 protein_coding protein_coding MGP_CBAJ_T0068328.1 MGP_CBAJ_G0028647.1 mouse_genomes_project 4 149350157 149429476 + MGP_CBAJ_P0068328 Usp48 protein_coding protein_coding MGP_CBAJ_T0068329.1 MGP_CBAJ_G0028647.1 mouse_genomes_project 4 149350224 149429476 + MGP_CBAJ_P0068329 Usp48 protein_coding protein_coding MGP_CBAJ_T0068330.1 MGP_CBAJ_G0028647.1 mouse_genomes_project 4 149350224 149391763 + MGP_CBAJ_P0068330 Usp48 protein_coding protein_coding MGP_CBAJ_T0068331.1 MGP_CBAJ_G0028647.1 mouse_genomes_project 4 149350245 149391763 + MGP_CBAJ_P0068331 Usp48 protein_coding protein_coding MGP_CBAJ_T0068332.1 MGP_CBAJ_G0028647.1 mouse_genomes_project 4 149384995 149391763 + MGP_CBAJ_P0068332 Usp48 protein_coding protein_coding MGP_CBAJ_T0068333.1 MGP_CBAJ_G0028647.1 mouse_genomes_project 4 149386235 149389854 + Usp48 protein_coding processed_transcript MGP_CBAJ_T0068334.1 MGP_CBAJ_G0028647.1 mouse_genomes_project 4 149387679 149404027 + Usp48 protein_coding processed_transcript MGP_CBAJ_T0068335.1 MGP_CBAJ_G0028647.1 mouse_genomes_project 4 149389854 149404461 + MGP_CBAJ_P0068335 Usp48 protein_coding protein_coding MGP_CBAJ_T0068336.1 MGP_CBAJ_G0028647.1 mouse_genomes_project 4 149391634 149429482 + Usp48 protein_coding processed_transcript MGP_CBAJ_T0068337.1 MGP_CBAJ_G0028647.1 mouse_genomes_project 4 149404200 149426208 + MGP_CBAJ_P0068337 Usp48 protein_coding protein_coding MGP_CBAJ_T0068338.1 MGP_CBAJ_G0028647.1 mouse_genomes_project 4 149404271 149408256 + MGP_CBAJ_P0068338 Usp48 protein_coding protein_coding MGP_CBAJ_T0068339.1 MGP_CBAJ_G0028647.1 mouse_genomes_project 4 149404675 149423877 + MGP_CBAJ_P0068339 Usp48 protein_coding protein_coding MGP_CBAJ_T0068340.1 MGP_CBAJ_G0028647.1 mouse_genomes_project 4 149415194 149426201 + MGP_CBAJ_P0068340 Usp48 protein_coding protein_coding MGP_CBAJ_T0068341.1 MGP_CBAJ_G0028647.1 mouse_genomes_project 4 149415279 149423711 + MGP_CBAJ_P0068341 Usp48 protein_coding protein_coding MGP_CBAJ_T0068342.1 MGP_CBAJ_G0028647.1 mouse_genomes_project 4 149421161 149427284 + MGP_CBAJ_P0068342 Usp48 protein_coding protein_coding MGP_CBAJ_T0068343.1 MGP_CBAJ_G0028647.1 mouse_genomes_project 4 149428342 149429475 + Usp48 protein_coding processed_transcript MGP_CBAJ_T0064456.1 MGP_CBAJ_G0027770.1 mouse_genomes_project 4 23167744 23258017 + Mms22l protein_coding retained_intron MGP_CBAJ_T0064457.1 MGP_CBAJ_G0027770.1 mouse_genomes_project 4 23167744 23279630 + MGP_CBAJ_P0064457 Mms22l protein_coding protein_coding MGP_CBAJ_T0064458.1 MGP_CBAJ_G0027770.1 mouse_genomes_project 4 23167755 23175394 + MGP_CBAJ_P0064458 Mms22l protein_coding protein_coding MGP_CBAJ_T0064459.1 MGP_CBAJ_G0027770.1 mouse_genomes_project 4 23167758 23168338 + Mms22l protein_coding processed_transcript MGP_CBAJ_T0064460.1 MGP_CBAJ_G0027770.1 mouse_genomes_project 4 23167837 23279626 + MGP_CBAJ_P0064460 Mms22l protein_coding protein_coding MGP_CBAJ_T0064461.1 MGP_CBAJ_G0027770.1 mouse_genomes_project 4 23169186 23201325 + MGP_CBAJ_P0064461 Mms22l protein_coding protein_coding MGP_CBAJ_T0064462.1 MGP_CBAJ_G0027770.1 mouse_genomes_project 4 23177142 23279629 + Mms22l protein_coding retained_intron MGP_CBAJ_T0064463.1 MGP_CBAJ_G0027770.1 mouse_genomes_project 4 23179414 23276664 + MGP_CBAJ_P0064463 Mms22l protein_coding nonsense_mediated_decay MGP_CBAJ_T0064464.1 MGP_CBAJ_G0027770.1 mouse_genomes_project 4 23208509 23251474 + MGP_CBAJ_P0064464 Mms22l protein_coding protein_coding MGP_CBAJ_T0064465.1 MGP_CBAJ_G0027770.1 mouse_genomes_project 4 23255526 23267887 + Mms22l protein_coding processed_transcript MGP_CBAJ_T0069219.1 MGP_CBAJ_G0028856.1 mouse_genomes_project 4 168980788 168994575 + MGP_CBAJ_P0069219 Wrap73 protein_coding protein_coding MGP_CBAJ_T0069220.1 MGP_CBAJ_G0028856.1 mouse_genomes_project 4 168980825 168994575 + Wrap73 protein_coding processed_transcript MGP_CBAJ_T0069221.1 MGP_CBAJ_G0028856.1 mouse_genomes_project 4 168989655 168993039 + MGP_CBAJ_P0069221 Wrap73 protein_coding protein_coding MGP_CBAJ_T0069222.1 MGP_CBAJ_G0028856.1 mouse_genomes_project 4 168992973 169012088 + Wrap73 protein_coding processed_transcript MGP_CBAJ_T0066388.1 MGP_CBAJ_G0028212.1 mouse_genomes_project 4 116281136 116298418 - MGP_CBAJ_P0066388 Podn protein_coding protein_coding MGP_CBAJ_T0066389.1 MGP_CBAJ_G0028212.1 mouse_genomes_project 4 116281138 116290640 - MGP_CBAJ_P0066389 Podn protein_coding protein_coding MGP_CBAJ_T0066390.1 MGP_CBAJ_G0028212.1 mouse_genomes_project 4 116281142 116295017 - MGP_CBAJ_P0066390 Podn protein_coding protein_coding MGP_CBAJ_T0066391.1 MGP_CBAJ_G0028212.1 mouse_genomes_project 4 116281196 116298281 - MGP_CBAJ_P0066391 Podn protein_coding protein_coding MGP_CBAJ_T0066392.1 MGP_CBAJ_G0028212.1 mouse_genomes_project 4 116281199 116298282 - Podn protein_coding processed_transcript MGP_CBAJ_T0066393.1 MGP_CBAJ_G0028212.1 mouse_genomes_project 4 116284052 116287851 - MGP_CBAJ_P0066393 Podn protein_coding protein_coding MGP_CBAJ_T0066394.1 MGP_CBAJ_G0028212.1 mouse_genomes_project 4 116293344 116297314 - Podn protein_coding processed_transcript MGP_CBAJ_T0066395.1 MGP_CBAJ_G0028212.1 mouse_genomes_project 4 116293516 116298665 - Podn protein_coding processed_transcript MGP_CBAJ_T0007688.1 MGP_CBAJ_G0006277.1 mouse_genomes_project 4 118276 124898 + 2210414B05Rik lincRNA lincRNA MGP_CBAJ_T0098389.1 MGP_CBAJ_G0036655.1 mouse_genomes_project 4 116902899 116905948 + Gm12737 sense_intronic sense_intronic MGP_CBAJ_T0064331.1 MGP_CBAJ_G0027733.1 mouse_genomes_project 4 9344942 9346648 - MGP_CBAJ_P0064331 Gm10604 protein_coding protein_coding MGP_CBAJ_T0010503.1 MGP_CBAJ_G0008641.1 mouse_genomes_project 4 142482905 142482977 - Gm27445 miRNA miRNA MGP_CBAJ_T0014537.1 MGP_CBAJ_G0012649.1 mouse_genomes_project 4 128680855 128681537 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007717.1 MGP_CBAJ_G0006300.1 mouse_genomes_project 4 25484255 25558636 - 4930548K13Rik lincRNA lincRNA MGP_CBAJ_T0014513.1 MGP_CBAJ_G0012625.1 mouse_genomes_project 4 121114616 121115492 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014234.1 MGP_CBAJ_G0012346.1 mouse_genomes_project 4 13873533 13873663 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0068732.1 MGP_CBAJ_G0028757.1 mouse_genomes_project 4 157611620 157611929 - MGP_CBAJ_P0068732 Gm9944 protein_coding protein_coding MGP_CBAJ_T0066444.1 MGP_CBAJ_G0028222.1 mouse_genomes_project 4 116977064 116991590 + Orc1 protein_coding processed_transcript MGP_CBAJ_T0066445.1 MGP_CBAJ_G0028222.1 mouse_genomes_project 4 116977075 116991731 + Orc1 protein_coding processed_transcript MGP_CBAJ_T0066446.1 MGP_CBAJ_G0028222.1 mouse_genomes_project 4 116977095 117012621 + MGP_CBAJ_P0066446 Orc1 protein_coding protein_coding MGP_CBAJ_T0066447.1 MGP_CBAJ_G0028222.1 mouse_genomes_project 4 116983839 116984630 + Orc1 protein_coding processed_transcript MGP_CBAJ_T0066448.1 MGP_CBAJ_G0028222.1 mouse_genomes_project 4 117000095 117002048 + Orc1 protein_coding processed_transcript MGP_CBAJ_T0014244.1 MGP_CBAJ_G0012356.1 mouse_genomes_project 4 16224630 16224852 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0067742.1 MGP_CBAJ_G0028512.1 mouse_genomes_project 4 140773093 140820325 - MGP_CBAJ_P0067742 Zcchc17 protein_coding protein_coding MGP_CBAJ_T0067743.1 MGP_CBAJ_G0028512.1 mouse_genomes_project 4 140773989 140776450 - Zcchc17 protein_coding processed_transcript MGP_CBAJ_T0067744.1 MGP_CBAJ_G0028512.1 mouse_genomes_project 4 140774405 140805237 - Zcchc17 protein_coding processed_transcript MGP_CBAJ_T0067745.1 MGP_CBAJ_G0028512.1 mouse_genomes_project 4 140797290 140799019 - Zcchc17 protein_coding processed_transcript MGP_CBAJ_T0067746.1 MGP_CBAJ_G0028512.1 mouse_genomes_project 4 140812545 140820298 - Zcchc17 protein_coding retained_intron MGP_CBAJ_T0004367.1 MGP_CBAJ_G0003803.1 mouse_genomes_project 4 46497667 46514575 - antisense antisense MGP_CBAJ_T0065319.1 MGP_CBAJ_G0027954.1 mouse_genomes_project 4 51599231 51602484 - MGP_CBAJ_P0065319 Ppp3r2 protein_coding protein_coding MGP_CBAJ_T0014560.1 MGP_CBAJ_G0012672.1 mouse_genomes_project 4 136305669 136306088 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014441.1 MGP_CBAJ_G0012553.1 mouse_genomes_project 4 95356483 95356976 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065545.1 MGP_CBAJ_G0028020.1 mouse_genomes_project 4 65774805 65794087 + MGP_CBAJ_P0065545 Bspry protein_coding protein_coding MGP_CBAJ_T0065546.1 MGP_CBAJ_G0028020.1 mouse_genomes_project 4 65774805 65794087 + MGP_CBAJ_P0065546 Bspry protein_coding protein_coding MGP_CBAJ_T0065547.1 MGP_CBAJ_G0028020.1 mouse_genomes_project 4 65774841 65781198 + MGP_CBAJ_P0065547 Bspry protein_coding nonsense_mediated_decay MGP_CBAJ_T0014415.1 MGP_CBAJ_G0012527.1 mouse_genomes_project 4 81490454 81490848 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0066706.1 MGP_CBAJ_G0028279.1 mouse_genomes_project 4 124761920 124772813 - Uqcrh protein_coding processed_transcript MGP_CBAJ_T0066707.1 MGP_CBAJ_G0028279.1 mouse_genomes_project 4 124761920 124772850 - MGP_CBAJ_P0066707 Uqcrh protein_coding protein_coding MGP_CBAJ_T0066708.1 MGP_CBAJ_G0028279.1 mouse_genomes_project 4 124761920 124772810 - MGP_CBAJ_P0066708 Uqcrh protein_coding protein_coding MGP_CBAJ_T0066709.1 MGP_CBAJ_G0028279.1 mouse_genomes_project 4 124761921 124765034 - Uqcrh protein_coding retained_intron MGP_CBAJ_T0066710.1 MGP_CBAJ_G0028279.1 mouse_genomes_project 4 124765056 124772838 - Uqcrh protein_coding retained_intron MGP_CBAJ_T0066184.1 MGP_CBAJ_G0028171.1 mouse_genomes_project 4 110898660 110946634 - MGP_CBAJ_P0066184 Slc35d1 protein_coding protein_coding MGP_CBAJ_T0066185.1 MGP_CBAJ_G0028171.1 mouse_genomes_project 4 110898667 110946273 - MGP_CBAJ_P0066185 Slc35d1 protein_coding protein_coding MGP_CBAJ_T0066186.1 MGP_CBAJ_G0028171.1 mouse_genomes_project 4 110930890 110946273 - MGP_CBAJ_P0066186 Slc35d1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066187.1 MGP_CBAJ_G0028171.1 mouse_genomes_project 4 110941803 110946269 - Slc35d1 protein_coding retained_intron MGP_CBAJ_T0066188.1 MGP_CBAJ_G0028171.1 mouse_genomes_project 4 110942024 110946142 - Slc35d1 protein_coding retained_intron MGP_CBAJ_T0099284.1 MGP_CBAJ_G0037539.1 mouse_genomes_project 4 116855492 116855599 - Gm24967 snRNA snRNA MGP_CBAJ_T0069032.1 MGP_CBAJ_G0028824.1 mouse_genomes_project 4 165360366 165365789 + MGP_CBAJ_P0069032 Uts2 protein_coding protein_coding MGP_CBAJ_T0067164.1 MGP_CBAJ_G0028381.1 mouse_genomes_project 4 130265136 130268913 - MGP_CBAJ_P0067164 Exo5 protein_coding protein_coding MGP_CBAJ_T0067165.1 MGP_CBAJ_G0028381.1 mouse_genomes_project 4 130265136 130265965 - MGP_CBAJ_P0067165 Exo5 protein_coding protein_coding MGP_CBAJ_T0067166.1 MGP_CBAJ_G0028381.1 mouse_genomes_project 4 130265142 130268913 - MGP_CBAJ_P0067166 Exo5 protein_coding protein_coding MGP_CBAJ_T0067167.1 MGP_CBAJ_G0028381.1 mouse_genomes_project 4 130266209 130268925 - MGP_CBAJ_P0067167 Exo5 protein_coding protein_coding MGP_CBAJ_T0065053.1 MGP_CBAJ_G0027897.1 mouse_genomes_project 4 45131034 45189182 - MGP_CBAJ_P0065053 Gne protein_coding protein_coding MGP_CBAJ_T0065054.1 MGP_CBAJ_G0027897.1 mouse_genomes_project 4 45133769 45158528 - MGP_CBAJ_P0065054 Gne protein_coding nonsense_mediated_decay MGP_CBAJ_T0065055.1 MGP_CBAJ_G0027897.1 mouse_genomes_project 4 45133785 45178102 - MGP_CBAJ_P0065055 Gne protein_coding protein_coding MGP_CBAJ_T0065056.1 MGP_CBAJ_G0027897.1 mouse_genomes_project 4 45133789 45171439 - MGP_CBAJ_P0065056 Gne protein_coding nonsense_mediated_decay MGP_CBAJ_T0065057.1 MGP_CBAJ_G0027897.1 mouse_genomes_project 4 45133917 45171479 - MGP_CBAJ_P0065057 Gne protein_coding protein_coding MGP_CBAJ_T0065058.1 MGP_CBAJ_G0027897.1 mouse_genomes_project 4 45149199 45177948 - MGP_CBAJ_P0065058 Gne protein_coding nonsense_mediated_decay MGP_CBAJ_T0065059.1 MGP_CBAJ_G0027897.1 mouse_genomes_project 4 45156104 45171580 - MGP_CBAJ_P0065059 Gne protein_coding protein_coding MGP_CBAJ_T0065060.1 MGP_CBAJ_G0027897.1 mouse_genomes_project 4 45158535 45168795 - Gne protein_coding retained_intron MGP_CBAJ_T0065061.1 MGP_CBAJ_G0027897.1 mouse_genomes_project 4 45162796 45189172 - Gne protein_coding retained_intron MGP_CBAJ_T0065062.1 MGP_CBAJ_G0027897.1 mouse_genomes_project 4 45162964 45188929 - MGP_CBAJ_P0065062 Gne protein_coding protein_coding MGP_CBAJ_T0065063.1 MGP_CBAJ_G0027897.1 mouse_genomes_project 4 45163068 45178060 - Gne protein_coding processed_transcript MGP_CBAJ_T0065064.1 MGP_CBAJ_G0027897.1 mouse_genomes_project 4 45163087 45177926 - MGP_CBAJ_P0065064 Gne protein_coding protein_coding MGP_CBAJ_T0065065.1 MGP_CBAJ_G0027897.1 mouse_genomes_project 4 45163199 45178341 - MGP_CBAJ_P0065065 Gne protein_coding protein_coding MGP_CBAJ_T0065066.1 MGP_CBAJ_G0027897.1 mouse_genomes_project 4 45163208 45178342 - MGP_CBAJ_P0065066 Gne protein_coding protein_coding MGP_CBAJ_T0017816.1 MGP_CBAJ_G0015306.1 mouse_genomes_project 4 114289687 114342699 + Gm12724 processed_transcript processed_transcript MGP_CBAJ_T0066428.1 MGP_CBAJ_G0028219.1 mouse_genomes_project 4 116762045 116770331 - MGP_CBAJ_P0066428 Gpx7 protein_coding protein_coding MGP_CBAJ_T0066429.1 MGP_CBAJ_G0028219.1 mouse_genomes_project 4 116762504 116770094 - MGP_CBAJ_P0066429 Gpx7 protein_coding protein_coding MGP_CBAJ_T0004529.1 MGP_CBAJ_G0003926.1 mouse_genomes_project 4 169966231 169969609 + Gm10564 antisense antisense MGP_CBAJ_T0099242.1 MGP_CBAJ_G0037497.1 mouse_genomes_project 4 24297165 24297328 - Gm24977 snRNA snRNA MGP_CBAJ_T0014437.1 MGP_CBAJ_G0012549.1 mouse_genomes_project 4 92674010 92674794 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067470.1 MGP_CBAJ_G0028456.1 mouse_genomes_project 4 137068090 137160409 + MGP_CBAJ_P0067470 Dlgap3 protein_coding protein_coding MGP_CBAJ_T0067471.1 MGP_CBAJ_G0028456.1 mouse_genomes_project 4 137071728 137160409 + MGP_CBAJ_P0067471 Dlgap3 protein_coding protein_coding MGP_CBAJ_T0067472.1 MGP_CBAJ_G0028456.1 mouse_genomes_project 4 137095702 137159755 + MGP_CBAJ_P0067472 Dlgap3 protein_coding protein_coding MGP_CBAJ_T0067473.1 MGP_CBAJ_G0028456.1 mouse_genomes_project 4 137115668 137129372 + Dlgap3 protein_coding processed_transcript MGP_CBAJ_T0017855.1 MGP_CBAJ_G0015327.1 mouse_genomes_project 4 169881825 169882734 - Gm20421 processed_transcript processed_transcript MGP_CBAJ_T0004440.1 MGP_CBAJ_G0003858.1 mouse_genomes_project 4 132601187 132602170 - Gm12923 antisense antisense MGP_CBAJ_T0014461.1 MGP_CBAJ_G0012573.1 mouse_genomes_project 4 102874403 102874681 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067255.1 MGP_CBAJ_G0028405.1 mouse_genomes_project 4 133321697 133337846 - MGP_CBAJ_P0067255 Akirin1 protein_coding unknown_likely_coding MGP_CBAJ_T0067256.1 MGP_CBAJ_G0028405.1 mouse_genomes_project 4 133322965 133331087 - Akirin1 protein_coding processed_transcript MGP_CBAJ_T0067257.1 MGP_CBAJ_G0028405.1 mouse_genomes_project 4 133324091 133337943 - Akirin1 protein_coding processed_transcript MGP_CBAJ_T0007764.1 MGP_CBAJ_G0006340.1 mouse_genomes_project 4 67026642 67042687 - lincRNA lincRNA MGP_CBAJ_T0068803.1 MGP_CBAJ_G0028782.1 mouse_genomes_project 4 161883707 161898053 + Mad2l2 protein_coding processed_transcript MGP_CBAJ_T0068804.1 MGP_CBAJ_G0028782.1 mouse_genomes_project 4 161897443 161902309 + MGP_CBAJ_P0068804 Mad2l2 protein_coding protein_coding MGP_CBAJ_T0068805.1 MGP_CBAJ_G0028782.1 mouse_genomes_project 4 161897985 161902308 + MGP_CBAJ_P0068805 Mad2l2 protein_coding protein_coding MGP_CBAJ_T0068806.1 MGP_CBAJ_G0028782.1 mouse_genomes_project 4 161898023 161900643 + Mad2l2 protein_coding retained_intron MGP_CBAJ_T0068807.1 MGP_CBAJ_G0028782.1 mouse_genomes_project 4 161898056 161902872 + MGP_CBAJ_P0068807 Mad2l2 protein_coding protein_coding MGP_CBAJ_T0068808.1 MGP_CBAJ_G0028782.1 mouse_genomes_project 4 161901977 161902639 + Mad2l2 protein_coding retained_intron MGP_CBAJ_T0066689.1 MGP_CBAJ_G0028276.1 mouse_genomes_project 4 124577219 124587590 - MGP_CBAJ_P0066689 Dmbx1 protein_coding protein_coding MGP_CBAJ_T0066690.1 MGP_CBAJ_G0028276.1 mouse_genomes_project 4 124577219 124601486 - MGP_CBAJ_P0066690 Dmbx1 protein_coding protein_coding MGP_CBAJ_T0066691.1 MGP_CBAJ_G0028276.1 mouse_genomes_project 4 124577220 124601486 - MGP_CBAJ_P0066691 Dmbx1 protein_coding protein_coding MGP_CBAJ_T0014433.1 MGP_CBAJ_G0012545.1 mouse_genomes_project 4 90302784 90303832 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0065339.1 MGP_CBAJ_G0027962.1 mouse_genomes_project 4 55332319 55343164 + MGP_CBAJ_P0065339 Nipsnap3a protein_coding nonsense_mediated_decay MGP_CBAJ_T0065340.1 MGP_CBAJ_G0027962.1 mouse_genomes_project 4 55332331 55343171 + MGP_CBAJ_P0065340 Nipsnap3a protein_coding protein_coding MGP_CBAJ_T0065341.1 MGP_CBAJ_G0027962.1 mouse_genomes_project 4 55332465 55343480 + MGP_CBAJ_P0065341 Nipsnap3a protein_coding protein_coding MGP_CBAJ_T0065342.1 MGP_CBAJ_G0027962.1 mouse_genomes_project 4 55342565 55343163 + Nipsnap3a protein_coding retained_intron MGP_CBAJ_T0065978.1 MGP_CBAJ_G0028124.1 mouse_genomes_project 4 102998093 103035629 - MGP_CBAJ_P0065978 Cyp2j7 protein_coding protein_coding MGP_CBAJ_T0067441.1 MGP_CBAJ_G0028451.1 mouse_genomes_project 4 136693099 136822474 - MGP_CBAJ_P0067441 Zmym4 protein_coding protein_coding MGP_CBAJ_T0067442.1 MGP_CBAJ_G0028451.1 mouse_genomes_project 4 136702876 136704687 - Zmym4 protein_coding processed_transcript MGP_CBAJ_T0067443.1 MGP_CBAJ_G0028451.1 mouse_genomes_project 4 136749726 136760702 - Zmym4 protein_coding processed_transcript MGP_CBAJ_T0067444.1 MGP_CBAJ_G0028451.1 mouse_genomes_project 4 136754927 136760590 - Zmym4 protein_coding processed_transcript MGP_CBAJ_T0067445.1 MGP_CBAJ_G0028451.1 mouse_genomes_project 4 136760419 136768858 - Zmym4 protein_coding processed_transcript MGP_CBAJ_T0067446.1 MGP_CBAJ_G0028451.1 mouse_genomes_project 4 136768496 136771223 - Zmym4 protein_coding processed_transcript MGP_CBAJ_T0067447.1 MGP_CBAJ_G0028451.1 mouse_genomes_project 4 136771221 136822519 - Zmym4 protein_coding processed_transcript MGP_CBAJ_T0067448.1 MGP_CBAJ_G0028451.1 mouse_genomes_project 4 136771254 136822543 - Zmym4 protein_coding processed_transcript MGP_CBAJ_T0014235.1 MGP_CBAJ_G0012347.1 mouse_genomes_project 4 14013221 14014253 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014390.1 MGP_CBAJ_G0012502.1 mouse_genomes_project 4 73229647 73233136 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098040.1 MGP_CBAJ_G0036313.1 mouse_genomes_project 4 42084968 42085083 + n-R5s183 rRNA rRNA MGP_CBAJ_T0007801.1 MGP_CBAJ_G0006372.1 mouse_genomes_project 4 107343399 107362475 + Gm12702 lincRNA lincRNA MGP_CBAJ_T0068600.1 MGP_CBAJ_G0028706.1 mouse_genomes_project 4 153819294 153836759 - MGP_CBAJ_P0068600 Clcnka protein_coding protein_coding MGP_CBAJ_T0068601.1 MGP_CBAJ_G0028706.1 mouse_genomes_project 4 153819294 153837279 - MGP_CBAJ_P0068601 Clcnka protein_coding protein_coding MGP_CBAJ_T0068602.1 MGP_CBAJ_G0028706.1 mouse_genomes_project 4 153829874 153833295 - Clcnka protein_coding retained_intron MGP_CBAJ_T0068603.1 MGP_CBAJ_G0028706.1 mouse_genomes_project 4 153833586 153837129 - MGP_CBAJ_P0068603 Clcnka protein_coding protein_coding MGP_CBAJ_T0069235.1 MGP_CBAJ_G0028859.1 mouse_genomes_project 4 169142905 169146915 - Arhgef16 protein_coding retained_intron MGP_CBAJ_T0069236.1 MGP_CBAJ_G0028859.1 mouse_genomes_project 4 169142905 169164970 - Arhgef16 protein_coding retained_intron MGP_CBAJ_T0069237.1 MGP_CBAJ_G0028859.1 mouse_genomes_project 4 169142905 169165132 - MGP_CBAJ_P0069237 Arhgef16 protein_coding protein_coding MGP_CBAJ_T0069238.1 MGP_CBAJ_G0028859.1 mouse_genomes_project 4 169143169 169166739 - MGP_CBAJ_P0069238 Arhgef16 protein_coding protein_coding MGP_CBAJ_T0069239.1 MGP_CBAJ_G0028859.1 mouse_genomes_project 4 169152113 169164970 - MGP_CBAJ_P0069239 Arhgef16 protein_coding protein_coding MGP_CBAJ_T0069240.1 MGP_CBAJ_G0028859.1 mouse_genomes_project 4 169156121 169166752 - MGP_CBAJ_P0069240 Arhgef16 protein_coding protein_coding MGP_CBAJ_T0066462.1 MGP_CBAJ_G0028226.1 mouse_genomes_project 4 117228781 117250197 - MGP_CBAJ_P0066462 Btf3l4 protein_coding protein_coding MGP_CBAJ_T0066463.1 MGP_CBAJ_G0028226.1 mouse_genomes_project 4 117233091 117240470 - Btf3l4 protein_coding processed_transcript MGP_CBAJ_T0066464.1 MGP_CBAJ_G0028226.1 mouse_genomes_project 4 117239977 117247161 - Btf3l4 protein_coding processed_transcript MGP_CBAJ_T0068443.1 MGP_CBAJ_G0028667.1 mouse_genomes_project 4 150906767 150909708 - MGP_CBAJ_P0068443 Gm13030 protein_coding protein_coding MGP_CBAJ_T0011437.1 MGP_CBAJ_G0009575.1 mouse_genomes_project 4 49198383 49198503 + Gm27668 misc_RNA misc_RNA MGP_CBAJ_T0014608.1 MGP_CBAJ_G0012720.1 mouse_genomes_project 4 161535595 161536021 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0069440.1 MGP_CBAJ_G0028897.1 mouse_genomes_project 4 170909636 170921550 + MGP_CBAJ_P0069440 Dvl1 protein_coding protein_coding MGP_CBAJ_T0069441.1 MGP_CBAJ_G0028897.1 mouse_genomes_project 4 170909695 170921125 + MGP_CBAJ_P0069441 Dvl1 protein_coding protein_coding MGP_CBAJ_T0069442.1 MGP_CBAJ_G0028897.1 mouse_genomes_project 4 170909700 170921549 + Dvl1 protein_coding retained_intron MGP_CBAJ_T0069443.1 MGP_CBAJ_G0028897.1 mouse_genomes_project 4 170909800 170921550 + Dvl1 protein_coding retained_intron MGP_CBAJ_T0069444.1 MGP_CBAJ_G0028897.1 mouse_genomes_project 4 170909820 170921550 + Dvl1 protein_coding retained_intron MGP_CBAJ_T0069445.1 MGP_CBAJ_G0028897.1 mouse_genomes_project 4 170909905 170921550 + Dvl1 protein_coding retained_intron MGP_CBAJ_T0069446.1 MGP_CBAJ_G0028897.1 mouse_genomes_project 4 170915658 170916200 + Dvl1 protein_coding processed_transcript MGP_CBAJ_T0069447.1 MGP_CBAJ_G0028897.1 mouse_genomes_project 4 170916819 170918479 + Dvl1 protein_coding retained_intron MGP_CBAJ_T0014210.1 MGP_CBAJ_G0012322.1 mouse_genomes_project 4 7068366 7069289 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007799.1 MGP_CBAJ_G0006370.1 mouse_genomes_project 4 106796197 106799713 + Gm12690 lincRNA lincRNA MGP_CBAJ_T0010513.1 MGP_CBAJ_G0008651.1 mouse_genomes_project 4 146782702 146782831 - Gm25317 miRNA miRNA MGP_CBAJ_T0017823.1 MGP_CBAJ_G0015310.1 mouse_genomes_project 4 123249660 123261524 + Foxd2os processed_transcript processed_transcript MGP_CBAJ_T0017824.1 MGP_CBAJ_G0015310.1 mouse_genomes_project 4 123249660 123262300 + Foxd2os processed_transcript processed_transcript MGP_CBAJ_T0066740.1 MGP_CBAJ_G0028285.1 mouse_genomes_project 4 124882438 124883357 + MGP_CBAJ_P0066740 1700042G07Rik protein_coding protein_coding MGP_CBAJ_T0099260.1 MGP_CBAJ_G0037515.1 mouse_genomes_project 4 51083223 51083329 + Gm22685 snRNA snRNA MGP_CBAJ_T0068308.1 MGP_CBAJ_G0028635.1 mouse_genomes_project 4 148440411 148449259 - MGP_CBAJ_P0068308 C1qb protein_coding protein_coding MGP_CBAJ_T0068599.1 MGP_CBAJ_G0028705.1 mouse_genomes_project 4 153798684 153818860 + MGP_CBAJ_P0068599 Fam131c protein_coding protein_coding MGP_CBAJ_T0069529.1 MGP_CBAJ_G0028917.1 mouse_genomes_project 4 171373163 171388212 + MGP_CBAJ_P0069529 Noc2l protein_coding protein_coding MGP_CBAJ_T0069530.1 MGP_CBAJ_G0028917.1 mouse_genomes_project 4 171373204 171388199 + MGP_CBAJ_P0069530 Noc2l protein_coding protein_coding MGP_CBAJ_T0011442.1 MGP_CBAJ_G0009580.1 mouse_genomes_project 4 74441170 74441476 - Gm26320 misc_RNA misc_RNA MGP_CBAJ_T0014383.1 MGP_CBAJ_G0012495.1 mouse_genomes_project 4 68421956 68423169 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067108.1 MGP_CBAJ_G0028367.1 mouse_genomes_project 4 128721235 128767547 + MGP_CBAJ_P0067108 Foxj3 protein_coding protein_coding MGP_CBAJ_T0067109.1 MGP_CBAJ_G0028367.1 mouse_genomes_project 4 128723892 128823560 + MGP_CBAJ_P0067109 Foxj3 protein_coding protein_coding MGP_CBAJ_T0067110.1 MGP_CBAJ_G0028367.1 mouse_genomes_project 4 128723916 128785773 + MGP_CBAJ_P0067110 Foxj3 protein_coding protein_coding MGP_CBAJ_T0067111.1 MGP_CBAJ_G0028367.1 mouse_genomes_project 4 128723919 128823577 + MGP_CBAJ_P0067111 Foxj3 protein_coding protein_coding MGP_CBAJ_T0067112.1 MGP_CBAJ_G0028367.1 mouse_genomes_project 4 128723923 128798900 + Foxj3 protein_coding retained_intron MGP_CBAJ_T0067113.1 MGP_CBAJ_G0028367.1 mouse_genomes_project 4 128723929 128785782 + MGP_CBAJ_P0067113 Foxj3 protein_coding protein_coding MGP_CBAJ_T0067114.1 MGP_CBAJ_G0028367.1 mouse_genomes_project 4 128723938 128753853 + Foxj3 protein_coding retained_intron MGP_CBAJ_T0067115.1 MGP_CBAJ_G0028367.1 mouse_genomes_project 4 128724010 128767574 + MGP_CBAJ_P0067115 Foxj3 protein_coding protein_coding MGP_CBAJ_T0067116.1 MGP_CBAJ_G0028367.1 mouse_genomes_project 4 128724753 128767675 + MGP_CBAJ_P0067116 Foxj3 protein_coding protein_coding MGP_CBAJ_T0067117.1 MGP_CBAJ_G0028367.1 mouse_genomes_project 4 128815084 128817155 + Foxj3 protein_coding processed_transcript MGP_CBAJ_T0066234.1 MGP_CBAJ_G0028189.1 mouse_genomes_project 4 114758806 114775534 - MGP_CBAJ_P0066234 Ttc4 protein_coding protein_coding MGP_CBAJ_T0066235.1 MGP_CBAJ_G0028189.1 mouse_genomes_project 4 114758810 114775276 - Ttc4 protein_coding processed_transcript MGP_CBAJ_T0066236.1 MGP_CBAJ_G0028189.1 mouse_genomes_project 4 114758983 114764124 - Ttc4 protein_coding processed_transcript MGP_CBAJ_T0066237.1 MGP_CBAJ_G0028189.1 mouse_genomes_project 4 114759614 114775456 - MGP_CBAJ_P0066237 Ttc4 protein_coding protein_coding MGP_CBAJ_T0066238.1 MGP_CBAJ_G0028189.1 mouse_genomes_project 4 114764220 114768284 - Ttc4 protein_coding processed_transcript MGP_CBAJ_T0066239.1 MGP_CBAJ_G0028189.1 mouse_genomes_project 4 114764723 114767632 - Ttc4 protein_coding processed_transcript MGP_CBAJ_T0066240.1 MGP_CBAJ_G0028189.1 mouse_genomes_project 4 114767063 114775481 - MGP_CBAJ_P0066240 Ttc4 protein_coding protein_coding MGP_CBAJ_T0066241.1 MGP_CBAJ_G0028189.1 mouse_genomes_project 4 114768338 114775491 - Ttc4 protein_coding processed_transcript MGP_CBAJ_T0066242.1 MGP_CBAJ_G0028189.1 mouse_genomes_project 4 114772879 114775479 - Ttc4 protein_coding processed_transcript MGP_CBAJ_T0098049.1 MGP_CBAJ_G0036322.1 mouse_genomes_project 4 134496348 134496467 + n-R5s192 rRNA rRNA MGP_CBAJ_T0014323.1 MGP_CBAJ_G0012435.1 mouse_genomes_project 4 40676717 40678604 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014532.1 MGP_CBAJ_G0012644.1 mouse_genomes_project 4 127527119 127527546 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0068200.1 MGP_CBAJ_G0028608.1 mouse_genomes_project 4 146817678 146849480 - MGP_CBAJ_P0068200 Grhl3 protein_coding protein_coding MGP_CBAJ_T0065175.1 MGP_CBAJ_G0027916.1 mouse_genomes_project 4 47323894 47401421 + MGP_CBAJ_P0065175 Tdrd7 protein_coding protein_coding MGP_CBAJ_T0065176.1 MGP_CBAJ_G0027916.1 mouse_genomes_project 4 47330794 47401421 + MGP_CBAJ_P0065176 Tdrd7 protein_coding protein_coding MGP_CBAJ_T0065177.1 MGP_CBAJ_G0027916.1 mouse_genomes_project 4 47331395 47349963 + Tdrd7 protein_coding processed_transcript MGP_CBAJ_T0065178.1 MGP_CBAJ_G0027916.1 mouse_genomes_project 4 47352460 47367874 + Tdrd7 protein_coding processed_transcript MGP_CBAJ_T0065179.1 MGP_CBAJ_G0027916.1 mouse_genomes_project 4 47389751 47401421 + Tdrd7 protein_coding processed_transcript MGP_CBAJ_T0068987.1 MGP_CBAJ_G0028815.1 mouse_genomes_project 4 164330236 164358922 + MGP_CBAJ_P0068987 Slc2a7 protein_coding protein_coding MGP_CBAJ_T0068988.1 MGP_CBAJ_G0028815.1 mouse_genomes_project 4 164338544 164339417 + Slc2a7 protein_coding retained_intron MGP_CBAJ_T0069048.1 MGP_CBAJ_G0028827.1 mouse_genomes_project 4 165461973 165463847 + MGP_CBAJ_P0069048 Gm13090 protein_coding protein_coding MGP_CBAJ_T0067267.1 MGP_CBAJ_G0028408.1 mouse_genomes_project 4 133535445 133561672 + MGP_CBAJ_P0067267 Rragc protein_coding protein_coding MGP_CBAJ_T0067268.1 MGP_CBAJ_G0028408.1 mouse_genomes_project 4 133535473 133561668 + MGP_CBAJ_P0067268 Rragc protein_coding nonsense_mediated_decay MGP_CBAJ_T0067270.1 MGP_CBAJ_G0028408.1 mouse_genomes_project 4 133540904 133542809 + Rragc protein_coding processed_transcript MGP_CBAJ_T0067271.1 MGP_CBAJ_G0028408.1 mouse_genomes_project 4 133542724 133551778 + Rragc protein_coding retained_intron MGP_CBAJ_T0067272.1 MGP_CBAJ_G0028408.1 mouse_genomes_project 4 133543099 133560221 + Rragc protein_coding processed_transcript MGP_CBAJ_T0068264.1 MGP_CBAJ_G0028625.1 mouse_genomes_project 4 147642934 147676609 + Tcea3 protein_coding processed_transcript MGP_CBAJ_T0068265.1 MGP_CBAJ_G0028625.1 mouse_genomes_project 4 147643157 147680236 + MGP_CBAJ_P0068265 Tcea3 protein_coding protein_coding MGP_CBAJ_T0068266.1 MGP_CBAJ_G0028625.1 mouse_genomes_project 4 147643178 147664298 + MGP_CBAJ_P0068266 Tcea3 protein_coding protein_coding MGP_CBAJ_T0014593.1 MGP_CBAJ_G0012705.1 mouse_genomes_project 4 148836424 148837111 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004334.1 MGP_CBAJ_G0003777.1 mouse_genomes_project 4 6318816 6322181 - Gm11816 antisense antisense MGP_CBAJ_T0004335.1 MGP_CBAJ_G0003777.1 mouse_genomes_project 4 6320671 6322123 - Gm11816 antisense antisense MGP_CBAJ_T0100529.1 MGP_CBAJ_G0038784.1 mouse_genomes_project 4 44093234 44093364 - Gm23709 snoRNA snoRNA MGP_CBAJ_T0014552.1 MGP_CBAJ_G0012664.1 mouse_genomes_project 4 132801401 132801974 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014585.1 MGP_CBAJ_G0012697.1 mouse_genomes_project 4 147061570 147062048 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007784.1 MGP_CBAJ_G0006358.1 mouse_genomes_project 4 95208311 95257198 + Gm12603 lincRNA lincRNA MGP_CBAJ_T0007785.1 MGP_CBAJ_G0006358.1 mouse_genomes_project 4 95219276 95257301 + Gm12603 lincRNA lincRNA MGP_CBAJ_T0007746.1 MGP_CBAJ_G0006325.1 mouse_genomes_project 4 57151104 57151579 - Gm29067 lincRNA lincRNA MGP_CBAJ_T0004437.1 MGP_CBAJ_G0003855.1 mouse_genomes_project 4 128248238 128253312 - Gm12868 antisense antisense MGP_CBAJ_T0068010.1 MGP_CBAJ_G0028568.1 mouse_genomes_project 4 144888225 144923419 - MGP_CBAJ_P0068010 Dhdds protein_coding protein_coding MGP_CBAJ_T0068011.1 MGP_CBAJ_G0028568.1 mouse_genomes_project 4 144888254 144923416 - MGP_CBAJ_P0068011 Dhdds protein_coding protein_coding MGP_CBAJ_T0068012.1 MGP_CBAJ_G0028568.1 mouse_genomes_project 4 144888255 144899646 - Dhdds protein_coding processed_transcript MGP_CBAJ_T0068013.1 MGP_CBAJ_G0028568.1 mouse_genomes_project 4 144888260 144922922 - Dhdds protein_coding processed_transcript MGP_CBAJ_T0068014.1 MGP_CBAJ_G0028568.1 mouse_genomes_project 4 144888372 144923400 - Dhdds protein_coding processed_transcript MGP_CBAJ_T0068015.1 MGP_CBAJ_G0028568.1 mouse_genomes_project 4 144889389 144923400 - MGP_CBAJ_P0068015 Dhdds protein_coding protein_coding MGP_CBAJ_T0068016.1 MGP_CBAJ_G0028568.1 mouse_genomes_project 4 144890117 144916903 - MGP_CBAJ_P0068016 Dhdds protein_coding protein_coding MGP_CBAJ_T0068017.1 MGP_CBAJ_G0028568.1 mouse_genomes_project 4 144890145 144922922 - MGP_CBAJ_P0068017 Dhdds protein_coding protein_coding MGP_CBAJ_T0068018.1 MGP_CBAJ_G0028568.1 mouse_genomes_project 4 144890177 144922922 - MGP_CBAJ_P0068018 Dhdds protein_coding protein_coding MGP_CBAJ_T0068019.1 MGP_CBAJ_G0028568.1 mouse_genomes_project 4 144890439 144923447 - MGP_CBAJ_P0068019 Dhdds protein_coding protein_coding MGP_CBAJ_T0068020.1 MGP_CBAJ_G0028568.1 mouse_genomes_project 4 144899228 144919657 - Dhdds protein_coding processed_transcript MGP_CBAJ_T0067966.1 MGP_CBAJ_G0028558.1 mouse_genomes_project 4 144342525 144352796 + MGP_CBAJ_P0067966 Kdf1 protein_coding protein_coding MGP_CBAJ_T0067967.1 MGP_CBAJ_G0028558.1 mouse_genomes_project 4 144342554 144354668 + MGP_CBAJ_P0067967 Kdf1 protein_coding protein_coding MGP_CBAJ_T0067968.1 MGP_CBAJ_G0028558.1 mouse_genomes_project 4 144342585 144352519 + MGP_CBAJ_P0067968 Kdf1 protein_coding protein_coding MGP_CBAJ_T0067969.1 MGP_CBAJ_G0028558.1 mouse_genomes_project 4 144342617 144354663 + MGP_CBAJ_P0067969 Kdf1 protein_coding protein_coding MGP_CBAJ_T0067970.1 MGP_CBAJ_G0028558.1 mouse_genomes_project 4 144342645 144354665 + MGP_CBAJ_P0067970 Kdf1 protein_coding protein_coding MGP_CBAJ_T0014586.1 MGP_CBAJ_G0012698.1 mouse_genomes_project 4 147182187 147182683 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099250.1 MGP_CBAJ_G0037505.1 mouse_genomes_project 4 39774752 39774916 - Gm25581 snRNA snRNA MGP_CBAJ_T0099312.1 MGP_CBAJ_G0037567.1 mouse_genomes_project 4 146859561 146859662 + Gm23106 snRNA snRNA MGP_CBAJ_T0068127.1 MGP_CBAJ_G0028593.1 mouse_genomes_project 4 145584500 145604935 - MGP_CBAJ_P0068127 Sepn1 protein_coding protein_coding MGP_CBAJ_T0068128.1 MGP_CBAJ_G0028593.1 mouse_genomes_project 4 145586187 145587668 - Sepn1 protein_coding processed_transcript MGP_CBAJ_T0068734.1 MGP_CBAJ_G0028759.1 mouse_genomes_project 4 157694426 157703649 + MGP_CBAJ_P0068734 9430007A20Rik protein_coding protein_coding MGP_CBAJ_T0098165.1 MGP_CBAJ_G0036438.1 mouse_genomes_project 4 44475642 44475913 - Rmrp ribozyme ribozyme MGP_CBAJ_T0099278.1 MGP_CBAJ_G0037533.1 mouse_genomes_project 4 105397591 105397681 - Gm24960 snRNA snRNA MGP_CBAJ_T0067534.1 MGP_CBAJ_G0028474.1 mouse_genomes_project 4 139238988 139245065 + MGP_CBAJ_P0067534 Tmem54 protein_coding protein_coding MGP_CBAJ_T0067535.1 MGP_CBAJ_G0028474.1 mouse_genomes_project 4 139239014 139245065 + MGP_CBAJ_P0067535 Tmem54 protein_coding protein_coding MGP_CBAJ_T0067536.1 MGP_CBAJ_G0028474.1 mouse_genomes_project 4 139239041 139244956 + MGP_CBAJ_P0067536 Tmem54 protein_coding protein_coding MGP_CBAJ_T0067537.1 MGP_CBAJ_G0028474.1 mouse_genomes_project 4 139240309 139243983 + MGP_CBAJ_P0067537 Tmem54 protein_coding protein_coding MGP_CBAJ_T0068784.1 MGP_CBAJ_G0028775.1 mouse_genomes_project 4 161663504 161669830 + MGP_CBAJ_P0068784 2510039O18Rik protein_coding protein_coding MGP_CBAJ_T0064375.1 MGP_CBAJ_G0027746.1 mouse_genomes_project 4 13695253 13734466 + MGP_CBAJ_P0064375 Nbn protein_coding protein_coding MGP_CBAJ_T0064376.1 MGP_CBAJ_G0027746.1 mouse_genomes_project 4 13695295 13723431 + MGP_CBAJ_P0064376 Nbn protein_coding protein_coding MGP_CBAJ_T0064545.1 MGP_CBAJ_G0027788.1 mouse_genomes_project 4 32789018 32824271 + MGP_CBAJ_P0064545 Gabrr2 protein_coding protein_coding MGP_CBAJ_T0064546.1 MGP_CBAJ_G0027788.1 mouse_genomes_project 4 32789131 32824271 + MGP_CBAJ_P0064546 Gabrr2 protein_coding protein_coding MGP_CBAJ_T0064547.1 MGP_CBAJ_G0027788.1 mouse_genomes_project 4 32806180 32814047 + MGP_CBAJ_P0064547 Gabrr2 protein_coding protein_coding MGP_CBAJ_T0064548.1 MGP_CBAJ_G0027788.1 mouse_genomes_project 4 32808883 32814303 + MGP_CBAJ_P0064548 Gabrr2 protein_coding protein_coding MGP_CBAJ_T0065401.1 MGP_CBAJ_G0027979.1 mouse_genomes_project 4 59598681 59698711 - MGP_CBAJ_P0065401 Tmem245 protein_coding protein_coding MGP_CBAJ_T0065402.1 MGP_CBAJ_G0027979.1 mouse_genomes_project 4 59611009 59686460 - Tmem245 protein_coding processed_transcript MGP_CBAJ_T0065403.1 MGP_CBAJ_G0027979.1 mouse_genomes_project 4 59611009 59670641 - MGP_CBAJ_P0065403 Tmem245 protein_coding protein_coding MGP_CBAJ_T0065404.1 MGP_CBAJ_G0027979.1 mouse_genomes_project 4 59611380 59698685 - MGP_CBAJ_P0065404 Tmem245 protein_coding protein_coding MGP_CBAJ_T0065405.1 MGP_CBAJ_G0027979.1 mouse_genomes_project 4 59616751 59698698 - Tmem245 protein_coding processed_transcript MGP_CBAJ_T0068432.1 MGP_CBAJ_G0028665.1 mouse_genomes_project 4 150786256 150792545 + MGP_CBAJ_P0068432 Pla2g2d protein_coding protein_coding MGP_CBAJ_T0068433.1 MGP_CBAJ_G0028665.1 mouse_genomes_project 4 150788417 150791649 + MGP_CBAJ_P0068433 Pla2g2d protein_coding protein_coding MGP_CBAJ_T0069507.1 MGP_CBAJ_G0028910.1 mouse_genomes_project 4 171215762 171233316 + MGP_CBAJ_P0069507 9430015G10Rik protein_coding protein_coding MGP_CBAJ_T0069508.1 MGP_CBAJ_G0028910.1 mouse_genomes_project 4 171215765 171233316 + 9430015G10Rik protein_coding processed_transcript MGP_CBAJ_T0069509.1 MGP_CBAJ_G0028910.1 mouse_genomes_project 4 171215778 171233314 + MGP_CBAJ_P0069509 9430015G10Rik protein_coding protein_coding MGP_CBAJ_T0069510.1 MGP_CBAJ_G0028910.1 mouse_genomes_project 4 171215779 171232270 + MGP_CBAJ_P0069510 9430015G10Rik protein_coding protein_coding MGP_CBAJ_T0069511.1 MGP_CBAJ_G0028910.1 mouse_genomes_project 4 171215799 171228234 + 9430015G10Rik protein_coding processed_transcript MGP_CBAJ_T0069512.1 MGP_CBAJ_G0028910.1 mouse_genomes_project 4 171215810 171228468 + 9430015G10Rik protein_coding processed_transcript MGP_CBAJ_T0069513.1 MGP_CBAJ_G0028910.1 mouse_genomes_project 4 171215819 171222437 + 9430015G10Rik protein_coding processed_transcript MGP_CBAJ_T0069514.1 MGP_CBAJ_G0028910.1 mouse_genomes_project 4 171219773 171225574 + 9430015G10Rik protein_coding processed_transcript MGP_CBAJ_T0004457.1 MGP_CBAJ_G0003871.1 mouse_genomes_project 4 140428973 140452429 - Gm12963 antisense antisense MGP_CBAJ_T0004458.1 MGP_CBAJ_G0003871.1 mouse_genomes_project 4 140431576 140452429 - Gm12963 antisense antisense MGP_CBAJ_T0004459.1 MGP_CBAJ_G0003871.1 mouse_genomes_project 4 140431580 140433197 - Gm12963 antisense antisense MGP_CBAJ_T0007709.1 MGP_CBAJ_G0006293.1 mouse_genomes_project 4 17911919 17915074 - Gm12354 lincRNA lincRNA MGP_CBAJ_T0007710.1 MGP_CBAJ_G0006293.1 mouse_genomes_project 4 17911919 17915387 - Gm12354 lincRNA lincRNA MGP_CBAJ_T0007715.1 MGP_CBAJ_G0006298.1 mouse_genomes_project 4 22533437 22533904 - Gm28448 lincRNA lincRNA MGP_CBAJ_T0064674.1 MGP_CBAJ_G0027820.1 mouse_genomes_project 4 41653794 41665682 - MGP_CBAJ_P0064674 Bag1 protein_coding protein_coding MGP_CBAJ_T0064675.1 MGP_CBAJ_G0027820.1 mouse_genomes_project 4 41653795 41665695 - MGP_CBAJ_P0064675 Bag1 protein_coding protein_coding MGP_CBAJ_T0064676.1 MGP_CBAJ_G0027820.1 mouse_genomes_project 4 41653797 41665644 - MGP_CBAJ_P0064676 Bag1 protein_coding protein_coding MGP_CBAJ_T0066607.1 MGP_CBAJ_G0028250.1 mouse_genomes_project 4 120967641 121039233 - MGP_CBAJ_P0066607 Skint10 protein_coding protein_coding MGP_CBAJ_T0066608.1 MGP_CBAJ_G0028250.1 mouse_genomes_project 4 121032201 121039274 - MGP_CBAJ_P0066608 Skint10 protein_coding protein_coding MGP_CBAJ_T0066609.1 MGP_CBAJ_G0028250.1 mouse_genomes_project 4 121033625 121039235 - Skint10 protein_coding processed_transcript MGP_CBAJ_T0101892.1 MGP_CBAJ_G0039923.1 mouse_genomes_project 4 94697631 94699023 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0007893.1 MGP_CBAJ_G0006434.1 mouse_genomes_project 4 146907363 146910907 + 1700029M20Rik lincRNA lincRNA MGP_CBAJ_T0007894.1 MGP_CBAJ_G0006434.1 mouse_genomes_project 4 146907482 146909194 + 1700029M20Rik lincRNA lincRNA MGP_CBAJ_T0007895.1 MGP_CBAJ_G0006434.1 mouse_genomes_project 4 146907526 146909194 + 1700029M20Rik lincRNA lincRNA MGP_CBAJ_T0007896.1 MGP_CBAJ_G0006434.1 mouse_genomes_project 4 146907961 146908694 + 1700029M20Rik lincRNA lincRNA MGP_CBAJ_T0064390.1 MGP_CBAJ_G0027751.1 mouse_genomes_project 4 17428806 17685311 + MGP_CBAJ_P0064390 Cngb3 protein_coding protein_coding MGP_CBAJ_T0014514.1 MGP_CBAJ_G0012626.1 mouse_genomes_project 4 123630762 123653467 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0066538.1 MGP_CBAJ_G0028240.1 mouse_genomes_project 4 118533167 118538800 + MGP_CBAJ_P0066538 Dmrta2 protein_coding protein_coding MGP_CBAJ_T0100572.1 MGP_CBAJ_G0038827.1 mouse_genomes_project 4 127152332 127152436 + Gm23382 snoRNA snoRNA MGP_CBAJ_T0067336.1 MGP_CBAJ_G0028429.1 mouse_genomes_project 4 135774381 135794402 + MGP_CBAJ_P0067336 Csf3r protein_coding protein_coding MGP_CBAJ_T0067337.1 MGP_CBAJ_G0028429.1 mouse_genomes_project 4 135774557 135781726 + Csf3r protein_coding processed_transcript MGP_CBAJ_T0067338.1 MGP_CBAJ_G0028429.1 mouse_genomes_project 4 135777123 135794401 + MGP_CBAJ_P0067338 Csf3r protein_coding protein_coding MGP_CBAJ_T0067339.1 MGP_CBAJ_G0028429.1 mouse_genomes_project 4 135777168 135793532 + MGP_CBAJ_P0067339 Csf3r protein_coding unknown_likely_coding MGP_CBAJ_T0067340.1 MGP_CBAJ_G0028429.1 mouse_genomes_project 4 135787962 135793837 + Csf3r protein_coding processed_transcript MGP_CBAJ_T0099280.1 MGP_CBAJ_G0037535.1 mouse_genomes_project 4 108534127 108534190 - Gm22100 snRNA snRNA MGP_CBAJ_T0065661.1 MGP_CBAJ_G0028053.1 mouse_genomes_project 4 78436318 78645304 + MGP_CBAJ_P0065661 Frmd3 protein_coding protein_coding MGP_CBAJ_T0065662.1 MGP_CBAJ_G0028053.1 mouse_genomes_project 4 78436320 78631436 + MGP_CBAJ_P0065662 Frmd3 protein_coding protein_coding MGP_CBAJ_T0065663.1 MGP_CBAJ_G0028053.1 mouse_genomes_project 4 78608680 78630513 + Frmd3 protein_coding processed_transcript MGP_CBAJ_T0014525.1 MGP_CBAJ_G0012637.1 mouse_genomes_project 4 125777470 125778273 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067600.1 MGP_CBAJ_G0028488.1 mouse_genomes_project 4 139755261 139761436 + MGP_CBAJ_P0067600 Marcksl1 protein_coding protein_coding MGP_CBAJ_T0065499.1 MGP_CBAJ_G0028003.1 mouse_genomes_project 4 62587510 62626975 + MGP_CBAJ_P0065499 Hsdl2 protein_coding protein_coding MGP_CBAJ_T0065500.1 MGP_CBAJ_G0028003.1 mouse_genomes_project 4 62587592 62626974 + MGP_CBAJ_P0065500 Hsdl2 protein_coding protein_coding MGP_CBAJ_T0065501.1 MGP_CBAJ_G0028003.1 mouse_genomes_project 4 62602916 62610057 + MGP_CBAJ_P0065501 Hsdl2 protein_coding protein_coding MGP_CBAJ_T0007771.1 MGP_CBAJ_G0006347.1 mouse_genomes_project 4 76139601 76159227 + lincRNA lincRNA MGP_CBAJ_T0014617.1 MGP_CBAJ_G0012729.1 mouse_genomes_project 4 164431136 164431545 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068724.1 MGP_CBAJ_G0028750.1 mouse_genomes_project 4 157450805 157470343 + MGP_CBAJ_P0068724 protein_coding protein_coding MGP_CBAJ_T0014457.1 MGP_CBAJ_G0012569.1 mouse_genomes_project 4 100403127 100403385 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100574.1 MGP_CBAJ_G0038829.1 mouse_genomes_project 4 130441439 130441564 - Gm26186 snoRNA snoRNA MGP_CBAJ_T0064325.1 MGP_CBAJ_G0027732.1 mouse_genomes_project 4 9323567 9331836 - MGP_CBAJ_P0064325 Pdp1 protein_coding protein_coding MGP_CBAJ_T0064326.1 MGP_CBAJ_G0027732.1 mouse_genomes_project 4 9325190 9331365 - MGP_CBAJ_P0064326 Pdp1 protein_coding protein_coding MGP_CBAJ_T0064327.1 MGP_CBAJ_G0027732.1 mouse_genomes_project 4 9325190 9331205 - MGP_CBAJ_P0064327 Pdp1 protein_coding protein_coding MGP_CBAJ_T0064328.1 MGP_CBAJ_G0027732.1 mouse_genomes_project 4 9325190 9331311 - MGP_CBAJ_P0064328 Pdp1 protein_coding protein_coding MGP_CBAJ_T0064329.1 MGP_CBAJ_G0027732.1 mouse_genomes_project 4 9325190 9331811 - MGP_CBAJ_P0064329 Pdp1 protein_coding protein_coding MGP_CBAJ_T0064330.1 MGP_CBAJ_G0027732.1 mouse_genomes_project 4 9325194 9331804 - MGP_CBAJ_P0064330 Pdp1 protein_coding protein_coding MGP_CBAJ_T0064384.1 MGP_CBAJ_G0027749.1 mouse_genomes_project 4 15834182 16135899 + MGP_CBAJ_P0064384 Mmp16 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064385.1 MGP_CBAJ_G0027749.1 mouse_genomes_project 4 15834380 16002819 + MGP_CBAJ_P0064385 Mmp16 protein_coding protein_coding MGP_CBAJ_T0064386.1 MGP_CBAJ_G0027749.1 mouse_genomes_project 4 15834735 16137586 + MGP_CBAJ_P0064386 Mmp16 protein_coding protein_coding MGP_CBAJ_T0064387.1 MGP_CBAJ_G0027749.1 mouse_genomes_project 4 15834870 16061102 + Mmp16 protein_coding retained_intron MGP_CBAJ_T0064388.1 MGP_CBAJ_G0027749.1 mouse_genomes_project 4 16058169 16108469 + Mmp16 protein_coding retained_intron MGP_CBAJ_T0068690.1 MGP_CBAJ_G0028728.1 mouse_genomes_project 4 156053306 156099487 - MGP_CBAJ_P0068690 Pdpn protein_coding protein_coding MGP_CBAJ_T0068691.1 MGP_CBAJ_G0028728.1 mouse_genomes_project 4 156054209 156099386 - MGP_CBAJ_P0068691 Pdpn protein_coding protein_coding MGP_CBAJ_T0065573.1 MGP_CBAJ_G0028028.1 mouse_genomes_project 4 66529768 66536196 - Kif12 protein_coding processed_transcript MGP_CBAJ_T0065574.1 MGP_CBAJ_G0028028.1 mouse_genomes_project 4 66529771 66536281 - MGP_CBAJ_P0065574 Kif12 protein_coding protein_coding MGP_CBAJ_T0065575.1 MGP_CBAJ_G0028028.1 mouse_genomes_project 4 66531611 66534932 - Kif12 protein_coding processed_transcript MGP_CBAJ_T0065576.1 MGP_CBAJ_G0028028.1 mouse_genomes_project 4 66531863 66535324 - Kif12 protein_coding processed_transcript MGP_CBAJ_T0065577.1 MGP_CBAJ_G0028028.1 mouse_genomes_project 4 66533541 66535880 - Kif12 protein_coding processed_transcript MGP_CBAJ_T0065288.1 MGP_CBAJ_G0027944.1 mouse_genomes_project 4 50814812 50985518 + Plppr1 protein_coding retained_intron MGP_CBAJ_T0065289.1 MGP_CBAJ_G0027944.1 mouse_genomes_project 4 50814821 51181540 + MGP_CBAJ_P0065289 Plppr1 protein_coding protein_coding MGP_CBAJ_T0065290.1 MGP_CBAJ_G0027944.1 mouse_genomes_project 4 50814995 51096595 + Plppr1 protein_coding retained_intron MGP_CBAJ_T0098047.1 MGP_CBAJ_G0036320.1 mouse_genomes_project 4 101773187 101773301 + n-R5s189 rRNA rRNA MGP_CBAJ_T0065516.1 MGP_CBAJ_G0028011.1 mouse_genomes_project 4 65306616 65311435 - MGP_CBAJ_P0065516 Mup3 protein_coding protein_coding MGP_CBAJ_T0067146.1 MGP_CBAJ_G0028374.1 mouse_genomes_project 4 129816151 129820582 + MGP_CBAJ_P0067146 Slfnl1 protein_coding protein_coding MGP_CBAJ_T0014618.1 MGP_CBAJ_G0012730.1 mouse_genomes_project 4 165180347 165183244 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0067316.1 MGP_CBAJ_G0028423.1 mouse_genomes_project 4 134737691 134760182 + MGP_CBAJ_P0067316 Gnl2 protein_coding protein_coding MGP_CBAJ_T0067317.1 MGP_CBAJ_G0028423.1 mouse_genomes_project 4 134750953 134780386 + MGP_CBAJ_P0067317 Gnl2 protein_coding protein_coding MGP_CBAJ_T0067318.1 MGP_CBAJ_G0028423.1 mouse_genomes_project 4 134751019 134766260 + Gnl2 protein_coding processed_transcript MGP_CBAJ_T0067319.1 MGP_CBAJ_G0028423.1 mouse_genomes_project 4 134765973 134767936 + Gnl2 protein_coding processed_transcript MGP_CBAJ_T0067320.1 MGP_CBAJ_G0028423.1 mouse_genomes_project 4 134768247 134771280 + Gnl2 protein_coding processed_transcript MGP_CBAJ_T0067321.1 MGP_CBAJ_G0028423.1 mouse_genomes_project 4 134778160 134780390 + Gnl2 protein_coding processed_transcript MGP_CBAJ_T0001380.1 MGP_CBAJ_G0001306.1 mouse_genomes_project 4 128436901 128437335 - TEC TEC MGP_CBAJ_T0066258.1 MGP_CBAJ_G0028193.1 mouse_genomes_project 4 115058141 115191706 + Ssbp3 protein_coding processed_transcript MGP_CBAJ_T0066259.1 MGP_CBAJ_G0028193.1 mouse_genomes_project 4 115058910 115210185 + MGP_CBAJ_P0066259 Ssbp3 protein_coding protein_coding MGP_CBAJ_T0066260.1 MGP_CBAJ_G0028193.1 mouse_genomes_project 4 115058951 115199379 + MGP_CBAJ_P0066260 Ssbp3 protein_coding protein_coding MGP_CBAJ_T0066261.1 MGP_CBAJ_G0028193.1 mouse_genomes_project 4 115058973 115209058 + MGP_CBAJ_P0066261 Ssbp3 protein_coding protein_coding MGP_CBAJ_T0066262.1 MGP_CBAJ_G0028193.1 mouse_genomes_project 4 115059107 115208990 + MGP_CBAJ_P0066262 Ssbp3 protein_coding protein_coding MGP_CBAJ_T0066263.1 MGP_CBAJ_G0028193.1 mouse_genomes_project 4 115059301 115170177 + Ssbp3 protein_coding processed_transcript MGP_CBAJ_T0066264.1 MGP_CBAJ_G0028193.1 mouse_genomes_project 4 115059738 115209007 + Ssbp3 protein_coding processed_transcript MGP_CBAJ_T0066265.1 MGP_CBAJ_G0028193.1 mouse_genomes_project 4 115070594 115191658 + Ssbp3 protein_coding processed_transcript MGP_CBAJ_T0066266.1 MGP_CBAJ_G0028193.1 mouse_genomes_project 4 115070634 115198885 + Ssbp3 protein_coding processed_transcript MGP_CBAJ_T0066267.1 MGP_CBAJ_G0028193.1 mouse_genomes_project 4 115091347 115209035 + Ssbp3 protein_coding processed_transcript MGP_CBAJ_T0066268.1 MGP_CBAJ_G0028193.1 mouse_genomes_project 4 115108612 115209183 + Ssbp3 protein_coding processed_transcript MGP_CBAJ_T0066269.1 MGP_CBAJ_G0028193.1 mouse_genomes_project 4 115122385 115191704 + MGP_CBAJ_P0066269 Ssbp3 protein_coding protein_coding MGP_CBAJ_T0066270.1 MGP_CBAJ_G0028193.1 mouse_genomes_project 4 115188818 115198000 + Ssbp3 protein_coding processed_transcript MGP_CBAJ_T0066271.1 MGP_CBAJ_G0028193.1 mouse_genomes_project 4 115191468 115192122 + Ssbp3 protein_coding processed_transcript MGP_CBAJ_T0066272.1 MGP_CBAJ_G0028193.1 mouse_genomes_project 4 115198838 115209011 + Ssbp3 protein_coding processed_transcript MGP_CBAJ_T0066273.1 MGP_CBAJ_G0028193.1 mouse_genomes_project 4 115198869 115201294 + Ssbp3 protein_coding processed_transcript MGP_CBAJ_T0066274.1 MGP_CBAJ_G0028193.1 mouse_genomes_project 4 115207445 115208942 + Ssbp3 protein_coding processed_transcript MGP_CBAJ_T0064310.1 MGP_CBAJ_G0027727.1 mouse_genomes_project 4 8794766 8867388 + MGP_CBAJ_P0064310 1110037F02Rik protein_coding protein_coding MGP_CBAJ_T0064311.1 MGP_CBAJ_G0027727.1 mouse_genomes_project 4 8794766 8838274 + MGP_CBAJ_P0064311 1110037F02Rik protein_coding protein_coding MGP_CBAJ_T0064312.1 MGP_CBAJ_G0027727.1 mouse_genomes_project 4 8794851 8867388 + MGP_CBAJ_P0064312 1110037F02Rik protein_coding protein_coding MGP_CBAJ_T0065700.1 MGP_CBAJ_G0028061.1 mouse_genomes_project 4 86243015 86293742 + MGP_CBAJ_P0065700 Lurap1l protein_coding protein_coding MGP_CBAJ_T0014355.1 MGP_CBAJ_G0012467.1 mouse_genomes_project 4 54724372 54724630 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004470.1 MGP_CBAJ_G0003881.1 mouse_genomes_project 4 147361205 147368019 + Gm13008 antisense antisense MGP_CBAJ_T0067476.1 MGP_CBAJ_G0028459.1 mouse_genomes_project 4 137255902 137259825 - MGP_CBAJ_P0067476 Gjb3 protein_coding protein_coding MGP_CBAJ_T0067477.1 MGP_CBAJ_G0028459.1 mouse_genomes_project 4 137255902 137261508 - MGP_CBAJ_P0067477 Gjb3 protein_coding protein_coding MGP_CBAJ_T0064606.1 MGP_CBAJ_G0027803.1 mouse_genomes_project 4 34737526 34829473 - MGP_CBAJ_P0064606 Zfp292 protein_coding protein_coding MGP_CBAJ_T0064607.1 MGP_CBAJ_G0027803.1 mouse_genomes_project 4 34737526 34829443 - MGP_CBAJ_P0064607 Zfp292 protein_coding protein_coding MGP_CBAJ_T0101896.1 MGP_CBAJ_G0039927.1 mouse_genomes_project 4 102954348 102954554 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0014610.1 MGP_CBAJ_G0012722.1 mouse_genomes_project 4 161759193 161759971 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0066349.1 MGP_CBAJ_G0028206.1 mouse_genomes_project 4 115896254 115903425 - MGP_CBAJ_P0066349 protein_coding protein_coding MGP_CBAJ_T0066350.1 MGP_CBAJ_G0028206.1 mouse_genomes_project 4 115896868 115900798 - protein_coding retained_intron MGP_CBAJ_T0066351.1 MGP_CBAJ_G0028206.1 mouse_genomes_project 4 115896969 115906010 - MGP_CBAJ_P0066351 protein_coding unknown_likely_coding MGP_CBAJ_T0066113.1 MGP_CBAJ_G0028157.1 mouse_genomes_project 4 109140982 109157485 + MGP_CBAJ_P0066113 Leprot protein_coding protein_coding MGP_CBAJ_T0066114.1 MGP_CBAJ_G0028157.1 mouse_genomes_project 4 109141057 109157485 + MGP_CBAJ_P0066114 Leprot protein_coding protein_coding MGP_CBAJ_T0067574.1 MGP_CBAJ_G0028480.1 mouse_genomes_project 4 139444107 139468934 + MGP_CBAJ_P0067574 Sync protein_coding protein_coding MGP_CBAJ_T0067575.1 MGP_CBAJ_G0028480.1 mouse_genomes_project 4 139444121 139467738 + Sync protein_coding retained_intron MGP_CBAJ_T0007753.1 MGP_CBAJ_G0006331.1 mouse_genomes_project 4 58607876 58632178 - Gm12519 lincRNA lincRNA MGP_CBAJ_T0067482.1 MGP_CBAJ_G0028463.1 mouse_genomes_project 4 137983684 138370336 + Csmd2 protein_coding processed_transcript MGP_CBAJ_T0067483.1 MGP_CBAJ_G0028463.1 mouse_genomes_project 4 137983860 138457928 + Csmd2 protein_coding retained_intron MGP_CBAJ_T0067484.1 MGP_CBAJ_G0028463.1 mouse_genomes_project 4 137983886 138609209 + MGP_CBAJ_P0067484 Csmd2 protein_coding protein_coding MGP_CBAJ_T0067486.1 MGP_CBAJ_G0028463.1 mouse_genomes_project 4 138510711 138533935 + Csmd2 protein_coding processed_transcript MGP_CBAJ_T0067487.1 MGP_CBAJ_G0028463.1 mouse_genomes_project 4 138555112 138566761 + Csmd2 protein_coding processed_transcript MGP_CBAJ_T0067488.1 MGP_CBAJ_G0028463.1 mouse_genomes_project 4 138586282 138591084 + Csmd2 protein_coding processed_transcript MGP_CBAJ_T0067733.1 MGP_CBAJ_G0028508.1 mouse_genomes_project 4 140636730 140637478 - Gm853 protein_coding processed_transcript MGP_CBAJ_T0067734.1 MGP_CBAJ_G0028508.1 mouse_genomes_project 4 140636730 140650014 - MGP_CBAJ_P0067734 Gm853 protein_coding protein_coding MGP_CBAJ_T0064505.1 MGP_CBAJ_G0027780.1 mouse_genomes_project 4 31833591 32223126 + MGP_CBAJ_P0064505 Bach2 protein_coding protein_coding MGP_CBAJ_T0064506.1 MGP_CBAJ_G0027780.1 mouse_genomes_project 4 31833737 32218206 + MGP_CBAJ_P0064506 Bach2 protein_coding protein_coding MGP_CBAJ_T0064507.1 MGP_CBAJ_G0027780.1 mouse_genomes_project 4 31833864 32137746 + Bach2 protein_coding processed_transcript MGP_CBAJ_T0064508.1 MGP_CBAJ_G0027780.1 mouse_genomes_project 4 31844421 31917068 + Bach2 protein_coding processed_transcript MGP_CBAJ_T0064509.1 MGP_CBAJ_G0027780.1 mouse_genomes_project 4 32045063 32223130 + MGP_CBAJ_P0064509 Bach2 protein_coding protein_coding MGP_CBAJ_T0064510.1 MGP_CBAJ_G0027780.1 mouse_genomes_project 4 32137614 32138736 + Bach2 protein_coding processed_transcript MGP_CBAJ_T0064511.1 MGP_CBAJ_G0027780.1 mouse_genomes_project 4 32211913 32216845 + Bach2 protein_coding processed_transcript MGP_CBAJ_T0067624.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139878633 139885356 + MGP_CBAJ_P0067624 Tmem234 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067625.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139878633 139885899 + MGP_CBAJ_P0067625 Tmem234 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067626.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139878634 139897146 + MGP_CBAJ_P0067626 Tmem234 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067627.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139878645 139886310 + MGP_CBAJ_P0067627 Tmem234 protein_coding protein_coding MGP_CBAJ_T0067628.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139878646 139885345 + MGP_CBAJ_P0067628 Tmem234 protein_coding protein_coding MGP_CBAJ_T0067629.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139878652 139885535 + MGP_CBAJ_P0067629 Tmem234 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067630.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139878656 139885380 + MGP_CBAJ_P0067630 Tmem234 protein_coding protein_coding MGP_CBAJ_T0067631.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139878656 139885614 + MGP_CBAJ_P0067631 Tmem234 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067632.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139878656 139901414 + MGP_CBAJ_P0067632 Tmem234 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067633.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139878660 139885623 + MGP_CBAJ_P0067633 Tmem234 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067634.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139878665 139886303 + MGP_CBAJ_P0067634 Tmem234 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067635.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139878666 139884960 + MGP_CBAJ_P0067635 Tmem234 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067636.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139878667 139885637 + Tmem234 protein_coding retained_intron MGP_CBAJ_T0067637.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139878668 139884977 + MGP_CBAJ_P0067637 Tmem234 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067638.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139878669 139880665 + Tmem234 protein_coding processed_transcript MGP_CBAJ_T0067639.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139878672 139879415 + MGP_CBAJ_P0067639 Tmem234 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067640.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139878948 139885491 + MGP_CBAJ_P0067640 Tmem234 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067641.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139878948 139879896 + MGP_CBAJ_P0067641 Tmem234 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067642.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139879053 139879716 + Tmem234 protein_coding retained_intron MGP_CBAJ_T0067643.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139879157 139880183 + Tmem234 protein_coding retained_intron MGP_CBAJ_T0067644.1 MGP_CBAJ_G0028493.1 mouse_genomes_project 4 139879976 139885128 + Tmem234 protein_coding retained_intron MGP_CBAJ_T0067932.1 MGP_CBAJ_G0028549.1 mouse_genomes_project 4 143969053 143971571 - MGP_CBAJ_P0067932 Gpr3 protein_coding protein_coding MGP_CBAJ_T0067933.1 MGP_CBAJ_G0028549.1 mouse_genomes_project 4 143970080 143972249 - MGP_CBAJ_P0067933 Gpr3 protein_coding protein_coding MGP_CBAJ_T0067934.1 MGP_CBAJ_G0028549.1 mouse_genomes_project 4 143970783 143972027 - MGP_CBAJ_P0067934 Gpr3 protein_coding protein_coding MGP_CBAJ_T0007922.1 MGP_CBAJ_G0006459.1 mouse_genomes_project 4 163879910 163880601 - Gm13073 lincRNA lincRNA MGP_CBAJ_T0066115.1 MGP_CBAJ_G0028158.1 mouse_genomes_project 4 109217702 109316115 + MGP_CBAJ_P0066115 Lepr protein_coding protein_coding MGP_CBAJ_T0066116.1 MGP_CBAJ_G0028158.1 mouse_genomes_project 4 109217702 109320032 + MGP_CBAJ_P0066116 Lepr protein_coding protein_coding MGP_CBAJ_T0066117.1 MGP_CBAJ_G0028158.1 mouse_genomes_project 4 109217702 109294461 + MGP_CBAJ_P0066117 Lepr protein_coding protein_coding MGP_CBAJ_T0066118.1 MGP_CBAJ_G0028158.1 mouse_genomes_project 4 109217705 109237566 + MGP_CBAJ_P0066118 Lepr protein_coding protein_coding MGP_CBAJ_T0066119.1 MGP_CBAJ_G0028158.1 mouse_genomes_project 4 109266056 109279386 + Lepr protein_coding processed_transcript MGP_CBAJ_T0066120.1 MGP_CBAJ_G0028158.1 mouse_genomes_project 4 109269457 109285272 + Lepr protein_coding processed_transcript MGP_CBAJ_T0066121.1 MGP_CBAJ_G0028158.1 mouse_genomes_project 4 109291156 109294359 + Lepr protein_coding processed_transcript MGP_CBAJ_T0101916.1 MGP_CBAJ_G0039947.1 mouse_genomes_project 4 132094704 132102657 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0068667.1 MGP_CBAJ_G0028723.1 mouse_genomes_project 4 154425725 154442454 - MGP_CBAJ_P0068667 Efhd2 protein_coding protein_coding MGP_CBAJ_T0064883.1 MGP_CBAJ_G0027865.1 mouse_genomes_project 4 44017570 44122468 + Unc13b protein_coding retained_intron MGP_CBAJ_T0064884.1 MGP_CBAJ_G0027865.1 mouse_genomes_project 4 44017586 44226810 + MGP_CBAJ_P0064884 Unc13b protein_coding protein_coding MGP_CBAJ_T0064885.1 MGP_CBAJ_G0027865.1 mouse_genomes_project 4 44017593 44127823 + Unc13b protein_coding processed_transcript MGP_CBAJ_T0064886.1 MGP_CBAJ_G0027865.1 mouse_genomes_project 4 44017601 44124900 + Unc13b protein_coding retained_intron MGP_CBAJ_T0064887.1 MGP_CBAJ_G0027865.1 mouse_genomes_project 4 44017690 44225569 + MGP_CBAJ_P0064887 Unc13b protein_coding protein_coding MGP_CBAJ_T0064888.1 MGP_CBAJ_G0027865.1 mouse_genomes_project 4 44017690 44225569 + MGP_CBAJ_P0064888 Unc13b protein_coding protein_coding MGP_CBAJ_T0064889.1 MGP_CBAJ_G0027865.1 mouse_genomes_project 4 44017697 44225552 + MGP_CBAJ_P0064889 Unc13b protein_coding protein_coding MGP_CBAJ_T0064890.1 MGP_CBAJ_G0027865.1 mouse_genomes_project 4 44017881 44139467 + MGP_CBAJ_P0064890 Unc13b protein_coding unknown_likely_coding MGP_CBAJ_T0064891.1 MGP_CBAJ_G0027865.1 mouse_genomes_project 4 44076394 44199448 + Unc13b protein_coding processed_transcript MGP_CBAJ_T0064892.1 MGP_CBAJ_G0027865.1 mouse_genomes_project 4 44134300 44194214 + Unc13b protein_coding processed_transcript MGP_CBAJ_T0064893.1 MGP_CBAJ_G0027865.1 mouse_genomes_project 4 44136913 44198766 + MGP_CBAJ_P0064893 Unc13b protein_coding protein_coding MGP_CBAJ_T0064894.1 MGP_CBAJ_G0027865.1 mouse_genomes_project 4 44170645 44207415 + MGP_CBAJ_P0064894 Unc13b protein_coding unknown_likely_coding MGP_CBAJ_T0064895.1 MGP_CBAJ_G0027865.1 mouse_genomes_project 4 44191778 44194629 + Unc13b protein_coding retained_intron MGP_CBAJ_T0064896.1 MGP_CBAJ_G0027865.1 mouse_genomes_project 4 44195478 44208074 + Unc13b protein_coding retained_intron MGP_CBAJ_T0064897.1 MGP_CBAJ_G0027865.1 mouse_genomes_project 4 44210803 44217901 + Unc13b protein_coding retained_intron MGP_CBAJ_T0064898.1 MGP_CBAJ_G0027865.1 mouse_genomes_project 4 44217179 44220056 + MGP_CBAJ_P0064898 Unc13b protein_coding protein_coding MGP_CBAJ_T0064899.1 MGP_CBAJ_G0027865.1 mouse_genomes_project 4 44218466 44223375 + Unc13b protein_coding retained_intron MGP_CBAJ_T0069091.1 MGP_CBAJ_G0028836.1 mouse_genomes_project 4 166625494 166629680 + MGP_CBAJ_P0069091 Tnfrsf25 protein_coding protein_coding MGP_CBAJ_T0069092.1 MGP_CBAJ_G0028836.1 mouse_genomes_project 4 166625903 166629672 + MGP_CBAJ_P0069092 Tnfrsf25 protein_coding protein_coding MGP_CBAJ_T0069093.1 MGP_CBAJ_G0028836.1 mouse_genomes_project 4 166625959 166626547 + Tnfrsf25 protein_coding processed_transcript MGP_CBAJ_T0069094.1 MGP_CBAJ_G0028836.1 mouse_genomes_project 4 166627531 166628884 + Tnfrsf25 protein_coding processed_transcript MGP_CBAJ_T0065354.1 MGP_CBAJ_G0027966.1 mouse_genomes_project 4 56048488 56125797 + MGP_CBAJ_P0065354 Fsd1l protein_coding protein_coding MGP_CBAJ_T0065355.1 MGP_CBAJ_G0027966.1 mouse_genomes_project 4 56048507 56070905 + Fsd1l protein_coding retained_intron MGP_CBAJ_T0065356.1 MGP_CBAJ_G0027966.1 mouse_genomes_project 4 56048508 56064917 + Fsd1l protein_coding retained_intron MGP_CBAJ_T0065357.1 MGP_CBAJ_G0027966.1 mouse_genomes_project 4 56048586 56119719 + MGP_CBAJ_P0065357 Fsd1l protein_coding protein_coding MGP_CBAJ_T0065358.1 MGP_CBAJ_G0027966.1 mouse_genomes_project 4 56048591 56119717 + MGP_CBAJ_P0065358 Fsd1l protein_coding protein_coding MGP_CBAJ_T0065359.1 MGP_CBAJ_G0027966.1 mouse_genomes_project 4 56048733 56080890 + MGP_CBAJ_P0065359 Fsd1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0065360.1 MGP_CBAJ_G0027966.1 mouse_genomes_project 4 56060297 56125797 + MGP_CBAJ_P0065360 Fsd1l protein_coding protein_coding MGP_CBAJ_T0014394.1 MGP_CBAJ_G0012506.1 mouse_genomes_project 4 75164453 75164924 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068178.1 MGP_CBAJ_G0028604.1 mouse_genomes_project 4 146628912 146656788 - MGP_CBAJ_P0068178 Ncmap protein_coding protein_coding MGP_CBAJ_T0068179.1 MGP_CBAJ_G0028604.1 mouse_genomes_project 4 146628912 146644229 - MGP_CBAJ_P0068179 Ncmap protein_coding protein_coding MGP_CBAJ_T0068180.1 MGP_CBAJ_G0028604.1 mouse_genomes_project 4 146628912 146656757 - MGP_CBAJ_P0068180 Ncmap protein_coding protein_coding MGP_CBAJ_T0068181.1 MGP_CBAJ_G0028604.1 mouse_genomes_project 4 146628913 146644246 - MGP_CBAJ_P0068181 Ncmap protein_coding protein_coding MGP_CBAJ_T0068182.1 MGP_CBAJ_G0028604.1 mouse_genomes_project 4 146629567 146644219 - MGP_CBAJ_P0068182 Ncmap protein_coding protein_coding MGP_CBAJ_T0068183.1 MGP_CBAJ_G0028604.1 mouse_genomes_project 4 146629857 146633914 - Ncmap protein_coding processed_transcript MGP_CBAJ_T0068184.1 MGP_CBAJ_G0028604.1 mouse_genomes_project 4 146629992 146644246 - MGP_CBAJ_P0068184 Ncmap protein_coding protein_coding MGP_CBAJ_T0068185.1 MGP_CBAJ_G0028604.1 mouse_genomes_project 4 146631267 146656794 - MGP_CBAJ_P0068185 Ncmap protein_coding protein_coding MGP_CBAJ_T0007928.1 MGP_CBAJ_G0006465.1 mouse_genomes_project 4 167855893 167857840 - Gm13173 lincRNA lincRNA MGP_CBAJ_T0014214.1 MGP_CBAJ_G0012326.1 mouse_genomes_project 4 8007668 8008854 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099326.1 MGP_CBAJ_G0037581.1 mouse_genomes_project 4 171116838 171116939 - Gm25982 snRNA snRNA MGP_CBAJ_T0010500.1 MGP_CBAJ_G0008638.1 mouse_genomes_project 4 139820411 139820540 - Mir8119 miRNA miRNA MGP_CBAJ_T0017790.1 MGP_CBAJ_G0015287.1 mouse_genomes_project 4 47086083 47087930 - Gm12409 processed_transcript processed_transcript MGP_CBAJ_T0067335.1 MGP_CBAJ_G0028428.1 mouse_genomes_project 4 135237954 135462346 + MGP_CBAJ_P0067335 Grik3 protein_coding protein_coding MGP_CBAJ_T0011458.1 MGP_CBAJ_G0009596.1 mouse_genomes_project 4 156141659 156141967 + Gm26313 misc_RNA misc_RNA MGP_CBAJ_T0069085.1 MGP_CBAJ_G0028835.1 mouse_genomes_project 4 166596485 166624957 + MGP_CBAJ_P0069085 Plekhg5 protein_coding protein_coding MGP_CBAJ_T0069086.1 MGP_CBAJ_G0028835.1 mouse_genomes_project 4 166606281 166624961 + MGP_CBAJ_P0069086 Plekhg5 protein_coding protein_coding MGP_CBAJ_T0069087.1 MGP_CBAJ_G0028835.1 mouse_genomes_project 4 166606281 166624951 + MGP_CBAJ_P0069087 Plekhg5 protein_coding protein_coding MGP_CBAJ_T0069088.1 MGP_CBAJ_G0028835.1 mouse_genomes_project 4 166614060 166615754 + Plekhg5 protein_coding retained_intron MGP_CBAJ_T0069089.1 MGP_CBAJ_G0028835.1 mouse_genomes_project 4 166617196 166624955 + Plekhg5 protein_coding retained_intron MGP_CBAJ_T0069090.1 MGP_CBAJ_G0028835.1 mouse_genomes_project 4 166617289 166617770 + Plekhg5 protein_coding retained_intron MGP_CBAJ_T0069337.1 MGP_CBAJ_G0028877.1 mouse_genomes_project 4 170394505 170405779 + protein_coding retained_intron MGP_CBAJ_T0069338.1 MGP_CBAJ_G0028877.1 mouse_genomes_project 4 170394573 170444824 + protein_coding processed_transcript MGP_CBAJ_T0069339.1 MGP_CBAJ_G0028877.1 mouse_genomes_project 4 170394573 170418746 + MGP_CBAJ_P0069339 protein_coding protein_coding MGP_CBAJ_T0069340.1 MGP_CBAJ_G0028877.1 mouse_genomes_project 4 170394573 170475825 + MGP_CBAJ_P0069340 protein_coding protein_coding MGP_CBAJ_T0069341.1 MGP_CBAJ_G0028877.1 mouse_genomes_project 4 170418675 170454143 + protein_coding retained_intron MGP_CBAJ_T0069342.1 MGP_CBAJ_G0028877.1 mouse_genomes_project 4 170419041 170475407 + MGP_CBAJ_P0069342 protein_coding protein_coding MGP_CBAJ_T0069343.1 MGP_CBAJ_G0028877.1 mouse_genomes_project 4 170426620 170453976 + protein_coding processed_transcript MGP_CBAJ_T0069344.1 MGP_CBAJ_G0028877.1 mouse_genomes_project 4 170457306 170475407 + protein_coding retained_intron MGP_CBAJ_T0069345.1 MGP_CBAJ_G0028877.1 mouse_genomes_project 4 170470891 170475532 + protein_coding retained_intron MGP_CBAJ_T0069346.1 MGP_CBAJ_G0028877.1 mouse_genomes_project 4 170470938 170475482 + protein_coding retained_intron MGP_CBAJ_T0004505.1 MGP_CBAJ_G0003908.1 mouse_genomes_project 4 162905621 162913279 + Gm17029 antisense antisense MGP_CBAJ_T0004506.1 MGP_CBAJ_G0003908.1 mouse_genomes_project 4 162905650 162932529 + Gm17029 antisense antisense MGP_CBAJ_T0004507.1 MGP_CBAJ_G0003908.1 mouse_genomes_project 4 162905684 162912315 + Gm17029 antisense antisense MGP_CBAJ_T0067235.1 MGP_CBAJ_G0028403.1 mouse_genomes_project 4 132905293 132929319 - MGP_CBAJ_P0067235 Macf1 protein_coding protein_coding MGP_CBAJ_T0067236.1 MGP_CBAJ_G0028403.1 mouse_genomes_project 4 132905293 133267010 - MGP_CBAJ_P0067236 Macf1 protein_coding protein_coding MGP_CBAJ_T0067237.1 MGP_CBAJ_G0028403.1 mouse_genomes_project 4 132905376 133116207 - MGP_CBAJ_P0067237 Macf1 protein_coding protein_coding MGP_CBAJ_T0067238.1 MGP_CBAJ_G0028403.1 mouse_genomes_project 4 132905376 133043423 - MGP_CBAJ_P0067238 Macf1 protein_coding protein_coding MGP_CBAJ_T0067239.1 MGP_CBAJ_G0028403.1 mouse_genomes_project 4 132905376 132922231 - MGP_CBAJ_P0067239 Macf1 protein_coding protein_coding MGP_CBAJ_T0067240.1 MGP_CBAJ_G0028403.1 mouse_genomes_project 4 132905376 133070787 - MGP_CBAJ_P0067240 Macf1 protein_coding protein_coding MGP_CBAJ_T0067241.1 MGP_CBAJ_G0028403.1 mouse_genomes_project 4 132905376 132931755 - MGP_CBAJ_P0067241 Macf1 protein_coding protein_coding MGP_CBAJ_T0067242.1 MGP_CBAJ_G0028403.1 mouse_genomes_project 4 132905376 133267010 - MGP_CBAJ_P0067242 Macf1 protein_coding protein_coding MGP_CBAJ_T0067243.1 MGP_CBAJ_G0028403.1 mouse_genomes_project 4 132905378 133097783 - MGP_CBAJ_P0067243 Macf1 protein_coding protein_coding MGP_CBAJ_T0067244.1 MGP_CBAJ_G0028403.1 mouse_genomes_project 4 132905378 133267010 - MGP_CBAJ_P0067244 Macf1 protein_coding protein_coding MGP_CBAJ_T0067245.1 MGP_CBAJ_G0028403.1 mouse_genomes_project 4 132905380 133267010 - MGP_CBAJ_P0067245 Macf1 protein_coding protein_coding MGP_CBAJ_T0067246.1 MGP_CBAJ_G0028403.1 mouse_genomes_project 4 132942487 132949897 - MGP_CBAJ_P0067246 Macf1 protein_coding protein_coding MGP_CBAJ_T0067247.1 MGP_CBAJ_G0028403.1 mouse_genomes_project 4 132956647 132966891 - Macf1 protein_coding processed_transcript MGP_CBAJ_T0067248.1 MGP_CBAJ_G0028403.1 mouse_genomes_project 4 133018917 133097926 - MGP_CBAJ_P0067248 Macf1 protein_coding protein_coding MGP_CBAJ_T0067249.1 MGP_CBAJ_G0028403.1 mouse_genomes_project 4 133018917 133244983 - MGP_CBAJ_P0067249 Macf1 protein_coding protein_coding MGP_CBAJ_T0067250.1 MGP_CBAJ_G0028403.1 mouse_genomes_project 4 133110574 133138191 - Macf1 protein_coding processed_transcript MGP_CBAJ_T0098205.1 MGP_CBAJ_G0036478.1 mouse_genomes_project 4 92407724 92407855 - Scarna8 scaRNA scaRNA MGP_CBAJ_T0007871.1 MGP_CBAJ_G0006420.1 mouse_genomes_project 4 141121351 141123138 + Gm12972 lincRNA lincRNA MGP_CBAJ_T0065972.1 MGP_CBAJ_G0028122.1 mouse_genomes_project 4 102834289 102861938 - MGP_CBAJ_P0065972 Cyp2j13 protein_coding protein_coding MGP_CBAJ_T0065973.1 MGP_CBAJ_G0028122.1 mouse_genomes_project 4 102849414 102878771 - MGP_CBAJ_P0065973 Cyp2j13 protein_coding protein_coding MGP_CBAJ_T0065974.1 MGP_CBAJ_G0028122.1 mouse_genomes_project 4 102851985 102878777 - MGP_CBAJ_P0065974 Cyp2j13 protein_coding protein_coding MGP_CBAJ_T0065975.1 MGP_CBAJ_G0028122.1 mouse_genomes_project 4 102851985 102878755 - MGP_CBAJ_P0065975 Cyp2j13 protein_coding protein_coding MGP_CBAJ_T0010478.1 MGP_CBAJ_G0008616.1 mouse_genomes_project 4 95053893 95053999 - Mir31 miRNA miRNA MGP_CBAJ_T0067740.1 MGP_CBAJ_G0028510.1 mouse_genomes_project 4 140765872 140766385 - MGP_CBAJ_P0067740 Gm10570 protein_coding protein_coding MGP_CBAJ_T0001379.1 MGP_CBAJ_G0001305.1 mouse_genomes_project 4 117020710 117022998 - TEC TEC MGP_CBAJ_T0064200.1 MGP_CBAJ_G0027709.1 mouse_genomes_project 4 3004990 3015010 - MGP_CBAJ_P0064200 Cyp7a1 protein_coding protein_coding MGP_CBAJ_T0064201.1 MGP_CBAJ_G0027709.1 mouse_genomes_project 4 3012183 3015012 - Cyp7a1 protein_coding processed_transcript MGP_CBAJ_T0066669.1 MGP_CBAJ_G0028272.1 mouse_genomes_project 4 124487561 124495650 + MGP_CBAJ_P0066669 Mob3c protein_coding protein_coding MGP_CBAJ_T0066670.1 MGP_CBAJ_G0028272.1 mouse_genomes_project 4 124487566 124491177 + Mob3c protein_coding retained_intron MGP_CBAJ_T0066671.1 MGP_CBAJ_G0028272.1 mouse_genomes_project 4 124488127 124491007 + MGP_CBAJ_P0066671 Mob3c protein_coding protein_coding MGP_CBAJ_T0014410.1 MGP_CBAJ_G0012522.1 mouse_genomes_project 4 79931592 79932307 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0065517.1 MGP_CBAJ_G0028012.1 mouse_genomes_project 4 65438174 65456977 - MGP_CBAJ_P0065517 Zfp37 protein_coding unknown_likely_coding MGP_CBAJ_T0065518.1 MGP_CBAJ_G0028012.1 mouse_genomes_project 4 65438174 65456977 - MGP_CBAJ_P0065518 Zfp37 protein_coding unknown_likely_coding MGP_CBAJ_T0065519.1 MGP_CBAJ_G0028012.1 mouse_genomes_project 4 65438178 65457062 - MGP_CBAJ_P0065519 Zfp37 protein_coding protein_coding MGP_CBAJ_T0065520.1 MGP_CBAJ_G0028012.1 mouse_genomes_project 4 65441176 65456818 - Zfp37 protein_coding processed_transcript MGP_CBAJ_T0065521.1 MGP_CBAJ_G0028012.1 mouse_genomes_project 4 65441227 65456505 - Zfp37 protein_coding processed_transcript MGP_CBAJ_T0064670.1 MGP_CBAJ_G0027818.1 mouse_genomes_project 4 41502847 41558543 - MGP_CBAJ_P0064670 B4galt1 protein_coding protein_coding MGP_CBAJ_T0064671.1 MGP_CBAJ_G0027818.1 mouse_genomes_project 4 41507390 41558543 - MGP_CBAJ_P0064671 B4galt1 protein_coding protein_coding MGP_CBAJ_T0065670.1 MGP_CBAJ_G0028055.1 mouse_genomes_project 4 79821419 79822371 - MGP_CBAJ_P0065670 Tmem261 protein_coding protein_coding MGP_CBAJ_T0067042.1 MGP_CBAJ_G0028354.1 mouse_genomes_project 4 128306587 128323299 - MGP_CBAJ_P0067042 protein_coding protein_coding MGP_CBAJ_T0067043.1 MGP_CBAJ_G0028354.1 mouse_genomes_project 4 128306721 128323264 - MGP_CBAJ_P0067043 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067044.1 MGP_CBAJ_G0028354.1 mouse_genomes_project 4 128308702 128323264 - protein_coding retained_intron MGP_CBAJ_T0067045.1 MGP_CBAJ_G0028354.1 mouse_genomes_project 4 128309710 128323244 - protein_coding processed_transcript MGP_CBAJ_T0067046.1 MGP_CBAJ_G0028354.1 mouse_genomes_project 4 128316843 128322035 - MGP_CBAJ_P0067046 protein_coding protein_coding MGP_CBAJ_T0067047.1 MGP_CBAJ_G0028354.1 mouse_genomes_project 4 128316904 128323239 - MGP_CBAJ_P0067047 protein_coding protein_coding MGP_CBAJ_T0067048.1 MGP_CBAJ_G0028354.1 mouse_genomes_project 4 128320482 128323284 - MGP_CBAJ_P0067048 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067049.1 MGP_CBAJ_G0028354.1 mouse_genomes_project 4 128320615 128323281 - MGP_CBAJ_P0067049 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067050.1 MGP_CBAJ_G0028354.1 mouse_genomes_project 4 128320623 128323299 - MGP_CBAJ_P0067050 protein_coding protein_coding MGP_CBAJ_T0010475.1 MGP_CBAJ_G0008613.1 mouse_genomes_project 4 87474072 87474182 - Gm22402 miRNA miRNA MGP_CBAJ_T0014583.1 MGP_CBAJ_G0012695.1 mouse_genomes_project 4 146636415 146636493 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010515.1 MGP_CBAJ_G0008653.1 mouse_genomes_project 4 148785932 148786002 + Gm25399 miRNA miRNA MGP_CBAJ_T0010452.1 MGP_CBAJ_G0008590.1 mouse_genomes_project 4 21208803 21208906 + Gm24078 miRNA miRNA MGP_CBAJ_T0100536.1 MGP_CBAJ_G0038791.1 mouse_genomes_project 4 56349400 56349525 + Gm23745 snoRNA snoRNA MGP_CBAJ_T0066642.1 MGP_CBAJ_G0028264.1 mouse_genomes_project 4 123993705 124003652 - MGP_CBAJ_P0066642 Cyp4a14 protein_coding protein_coding MGP_CBAJ_T0066643.1 MGP_CBAJ_G0028264.1 mouse_genomes_project 4 124001573 124003650 - Cyp4a14 protein_coding processed_transcript MGP_CBAJ_T0065717.1 MGP_CBAJ_G0028063.1 mouse_genomes_project 4 87728444 87967269 - MGP_CBAJ_P0065717 Nfib protein_coding protein_coding MGP_CBAJ_T0065718.1 MGP_CBAJ_G0028063.1 mouse_genomes_project 4 87758464 87967819 - Nfib protein_coding retained_intron MGP_CBAJ_T0065719.1 MGP_CBAJ_G0028063.1 mouse_genomes_project 4 87760233 87967819 - Nfib protein_coding retained_intron MGP_CBAJ_T0065720.1 MGP_CBAJ_G0028063.1 mouse_genomes_project 4 87786342 87968273 - Nfib protein_coding retained_intron MGP_CBAJ_T0065721.1 MGP_CBAJ_G0028063.1 mouse_genomes_project 4 87958504 87968288 - Nfib protein_coding retained_intron MGP_CBAJ_T0065722.1 MGP_CBAJ_G0028063.1 mouse_genomes_project 4 87960841 88178185 - MGP_CBAJ_P0065722 Nfib protein_coding protein_coding MGP_CBAJ_T0065723.1 MGP_CBAJ_G0028063.1 mouse_genomes_project 4 87961064 87961837 - Nfib protein_coding processed_transcript MGP_CBAJ_T0011446.1 MGP_CBAJ_G0009584.1 mouse_genomes_project 4 101082192 101082454 - Gm26410 misc_RNA misc_RNA MGP_CBAJ_T0101910.1 MGP_CBAJ_G0039941.1 mouse_genomes_project 4 126017544 126020925 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0101115.1 MGP_CBAJ_G0039313.1 mouse_genomes_project 4 7020529 7021964 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101116.1 MGP_CBAJ_G0039313.1 mouse_genomes_project 4 7021204 7022202 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0066615.1 MGP_CBAJ_G0028255.1 mouse_genomes_project 4 123265472 123266339 - MGP_CBAJ_P0066615 Foxe3 protein_coding protein_coding MGP_CBAJ_T0064550.1 MGP_CBAJ_G0027790.1 mouse_genomes_project 4 32908605 32923735 - MGP_CBAJ_P0064550 Pm20d2 protein_coding protein_coding MGP_CBAJ_T0064551.1 MGP_CBAJ_G0027790.1 mouse_genomes_project 4 32915906 32924039 - MGP_CBAJ_P0064551 Pm20d2 protein_coding protein_coding MGP_CBAJ_T0067480.1 MGP_CBAJ_G0028461.1 mouse_genomes_project 4 137287567 137290940 - MGP_CBAJ_P0067480 Gjb5 protein_coding protein_coding MGP_CBAJ_T0099247.1 MGP_CBAJ_G0037502.1 mouse_genomes_project 4 31578150 31578268 - Gm26254 snRNA snRNA MGP_CBAJ_T0066156.1 MGP_CBAJ_G0028167.1 mouse_genomes_project 4 110677059 110705579 + MGP_CBAJ_P0066156 Tctex1d1 protein_coding protein_coding MGP_CBAJ_T0066157.1 MGP_CBAJ_G0028167.1 mouse_genomes_project 4 110683146 110705809 + MGP_CBAJ_P0066157 Tctex1d1 protein_coding protein_coding MGP_CBAJ_T0066158.1 MGP_CBAJ_G0028167.1 mouse_genomes_project 4 110685486 110706830 + MGP_CBAJ_P0066158 Tctex1d1 protein_coding protein_coding MGP_CBAJ_T0066159.1 MGP_CBAJ_G0028167.1 mouse_genomes_project 4 110688720 110689787 + Tctex1d1 protein_coding processed_transcript MGP_CBAJ_T0099303.1 MGP_CBAJ_G0037558.1 mouse_genomes_project 4 137213105 137213208 - Gm22221 snRNA snRNA MGP_CBAJ_T0064396.1 MGP_CBAJ_G0027754.1 mouse_genomes_project 4 17796174 17841470 + MGP_CBAJ_P0064396 Gm12353 protein_coding protein_coding MGP_CBAJ_T0014202.1 MGP_CBAJ_G0012314.1 mouse_genomes_project 4 2999469 3000344 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004402.1 MGP_CBAJ_G0003827.1 mouse_genomes_project 4 106260325 106265718 + antisense antisense MGP_CBAJ_T0067160.1 MGP_CBAJ_G0028380.1 mouse_genomes_project 4 130195996 130225370 + Rims3 protein_coding processed_transcript MGP_CBAJ_T0067161.1 MGP_CBAJ_G0028380.1 mouse_genomes_project 4 130195999 130239828 + MGP_CBAJ_P0067161 Rims3 protein_coding protein_coding MGP_CBAJ_T0067162.1 MGP_CBAJ_G0028380.1 mouse_genomes_project 4 130202931 130239828 + MGP_CBAJ_P0067162 Rims3 protein_coding protein_coding MGP_CBAJ_T0067163.1 MGP_CBAJ_G0028380.1 mouse_genomes_project 4 130218745 130234809 + MGP_CBAJ_P0067163 Rims3 protein_coding protein_coding MGP_CBAJ_T0098388.1 MGP_CBAJ_G0036654.1 mouse_genomes_project 4 107426645 107427866 + Gm12701 sense_intronic sense_intronic MGP_CBAJ_T0004340.1 MGP_CBAJ_G0003782.1 mouse_genomes_project 4 12520244 12549414 + Gm11837 antisense antisense MGP_CBAJ_T0004341.1 MGP_CBAJ_G0003782.1 mouse_genomes_project 4 12521016 12549551 + Gm11837 antisense antisense MGP_CBAJ_T0004342.1 MGP_CBAJ_G0003782.1 mouse_genomes_project 4 12521031 12549426 + Gm11837 antisense antisense MGP_CBAJ_T0065193.1 MGP_CBAJ_G0027919.1 mouse_genomes_project 4 47518607 47558101 + MGP_CBAJ_P0065193 Ncbp1 protein_coding protein_coding MGP_CBAJ_T0065195.1 MGP_CBAJ_G0027919.1 mouse_genomes_project 4 47543604 47545798 + Ncbp1 protein_coding processed_transcript MGP_CBAJ_T0065196.1 MGP_CBAJ_G0027919.1 mouse_genomes_project 4 47550895 47557677 + Ncbp1 protein_coding processed_transcript MGP_CBAJ_T0069274.1 MGP_CBAJ_G0028867.1 mouse_genomes_project 4 169881978 169883427 + MGP_CBAJ_P0069274 Hes5 protein_coding protein_coding MGP_CBAJ_T0069275.1 MGP_CBAJ_G0028867.1 mouse_genomes_project 4 169882026 169882462 + Hes5 protein_coding processed_transcript MGP_CBAJ_T0064962.1 MGP_CBAJ_G0027874.1 mouse_genomes_project 4 44494474 44502440 + MGP_CBAJ_P0064962 Car9 protein_coding protein_coding MGP_CBAJ_T0064963.1 MGP_CBAJ_G0027874.1 mouse_genomes_project 4 44494493 44503059 + Car9 protein_coding processed_transcript MGP_CBAJ_T0064964.1 MGP_CBAJ_G0027874.1 mouse_genomes_project 4 44494781 44502388 + MGP_CBAJ_P0064964 Car9 protein_coding protein_coding MGP_CBAJ_T0064965.1 MGP_CBAJ_G0027874.1 mouse_genomes_project 4 44495360 44496458 + Car9 protein_coding processed_transcript MGP_CBAJ_T0064966.1 MGP_CBAJ_G0027874.1 mouse_genomes_project 4 44496026 44496519 + Car9 protein_coding processed_transcript MGP_CBAJ_T0064967.1 MGP_CBAJ_G0027874.1 mouse_genomes_project 4 44496420 44501785 + Car9 protein_coding processed_transcript MGP_CBAJ_T0064968.1 MGP_CBAJ_G0027874.1 mouse_genomes_project 4 44501461 44502272 + Car9 protein_coding processed_transcript MGP_CBAJ_T0014573.1 MGP_CBAJ_G0012685.1 mouse_genomes_project 4 142792703 142793024 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0068370.1 MGP_CBAJ_G0028651.1 mouse_genomes_project 4 149841284 149969315 + MGP_CBAJ_P0068370 Eif4g3 protein_coding protein_coding MGP_CBAJ_T0068371.1 MGP_CBAJ_G0028651.1 mouse_genomes_project 4 149841284 149993154 + MGP_CBAJ_P0068371 Eif4g3 protein_coding protein_coding MGP_CBAJ_T0068372.1 MGP_CBAJ_G0028651.1 mouse_genomes_project 4 149841284 149980156 + MGP_CBAJ_P0068372 Eif4g3 protein_coding protein_coding MGP_CBAJ_T0068373.1 MGP_CBAJ_G0028651.1 mouse_genomes_project 4 149841718 150077385 + MGP_CBAJ_P0068373 Eif4g3 protein_coding protein_coding MGP_CBAJ_T0068374.1 MGP_CBAJ_G0028651.1 mouse_genomes_project 4 149841718 150077385 + MGP_CBAJ_P0068374 Eif4g3 protein_coding protein_coding MGP_CBAJ_T0068375.1 MGP_CBAJ_G0028651.1 mouse_genomes_project 4 149841738 149842422 + Eif4g3 protein_coding processed_transcript MGP_CBAJ_T0068376.1 MGP_CBAJ_G0028651.1 mouse_genomes_project 4 149841746 149913473 + Eif4g3 protein_coding processed_transcript MGP_CBAJ_T0068377.1 MGP_CBAJ_G0028651.1 mouse_genomes_project 4 149841775 150076469 + MGP_CBAJ_P0068377 Eif4g3 protein_coding protein_coding MGP_CBAJ_T0068378.1 MGP_CBAJ_G0028651.1 mouse_genomes_project 4 149842210 150076469 + MGP_CBAJ_P0068378 Eif4g3 protein_coding protein_coding MGP_CBAJ_T0068379.1 MGP_CBAJ_G0028651.1 mouse_genomes_project 4 149855145 149967290 + MGP_CBAJ_P0068379 Eif4g3 protein_coding protein_coding MGP_CBAJ_T0068380.1 MGP_CBAJ_G0028651.1 mouse_genomes_project 4 150017347 150078795 + MGP_CBAJ_P0068380 Eif4g3 protein_coding protein_coding MGP_CBAJ_T0068381.1 MGP_CBAJ_G0028651.1 mouse_genomes_project 4 150048391 150078795 + Eif4g3 protein_coding processed_transcript MGP_CBAJ_T0068382.1 MGP_CBAJ_G0028651.1 mouse_genomes_project 4 150051047 150058979 + Eif4g3 protein_coding retained_intron MGP_CBAJ_T0068383.1 MGP_CBAJ_G0028651.1 mouse_genomes_project 4 150054994 150058757 + Eif4g3 protein_coding processed_transcript MGP_CBAJ_T0068384.1 MGP_CBAJ_G0028651.1 mouse_genomes_project 4 150072043 150073774 + Eif4g3 protein_coding processed_transcript MGP_CBAJ_T0004432.1 MGP_CBAJ_G0003850.1 mouse_genomes_project 4 126834252 126836627 + Gm12841 antisense antisense MGP_CBAJ_T0064597.1 MGP_CBAJ_G0027801.1 mouse_genomes_project 4 34667547 34681456 - MGP_CBAJ_P0064597 Gm136 protein_coding protein_coding MGP_CBAJ_T0014287.1 MGP_CBAJ_G0012399.1 mouse_genomes_project 4 28375106 28375285 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011454.1 MGP_CBAJ_G0009592.1 mouse_genomes_project 4 125750216 125750483 + Gm25435 misc_RNA misc_RNA MGP_CBAJ_T0066759.1 MGP_CBAJ_G0028288.1 mouse_genomes_project 4 125249046 125292339 + MGP_CBAJ_P0066759 Ipp protein_coding protein_coding MGP_CBAJ_T0066760.1 MGP_CBAJ_G0028288.1 mouse_genomes_project 4 125249049 125292347 + MGP_CBAJ_P0066760 Ipp protein_coding protein_coding MGP_CBAJ_T0065588.1 MGP_CBAJ_G0028032.1 mouse_genomes_project 4 66764705 66769532 + MGP_CBAJ_P0065588 Orm2 protein_coding protein_coding MGP_CBAJ_T0065589.1 MGP_CBAJ_G0028032.1 mouse_genomes_project 4 66764743 66768109 + MGP_CBAJ_P0065589 Orm2 protein_coding unknown_likely_coding MGP_CBAJ_T0068542.1 MGP_CBAJ_G0028694.1 mouse_genomes_project 4 153290038 153308175 + MGP_CBAJ_P0068542 Sdhb protein_coding protein_coding MGP_CBAJ_T0068543.1 MGP_CBAJ_G0028694.1 mouse_genomes_project 4 153290236 153305757 + Sdhb protein_coding processed_transcript MGP_CBAJ_T0068544.1 MGP_CBAJ_G0028694.1 mouse_genomes_project 4 153290238 153303258 + Sdhb protein_coding processed_transcript MGP_CBAJ_T0014623.1 MGP_CBAJ_G0012735.1 mouse_genomes_project 4 168874770 168874876 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0066004.1 MGP_CBAJ_G0028134.1 mouse_genomes_project 4 105366993 105397436 - MGP_CBAJ_P0066004 Tm2d1 protein_coding protein_coding MGP_CBAJ_T0066005.1 MGP_CBAJ_G0028134.1 mouse_genomes_project 4 105366993 105397250 - MGP_CBAJ_P0066005 Tm2d1 protein_coding protein_coding MGP_CBAJ_T0066006.1 MGP_CBAJ_G0028134.1 mouse_genomes_project 4 105366993 105389205 - MGP_CBAJ_P0066006 Tm2d1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066007.1 MGP_CBAJ_G0028134.1 mouse_genomes_project 4 105366993 105397496 - MGP_CBAJ_P0066007 Tm2d1 protein_coding protein_coding MGP_CBAJ_T0066008.1 MGP_CBAJ_G0028134.1 mouse_genomes_project 4 105367228 105397422 - MGP_CBAJ_P0066008 Tm2d1 protein_coding protein_coding MGP_CBAJ_T0068717.1 MGP_CBAJ_G0028744.1 mouse_genomes_project 4 157178034 157214583 - MGP_CBAJ_P0068717 C87977 protein_coding protein_coding MGP_CBAJ_T0068718.1 MGP_CBAJ_G0028744.1 mouse_genomes_project 4 157179241 157185231 - MGP_CBAJ_P0068718 C87977 protein_coding protein_coding MGP_CBAJ_T0014314.1 MGP_CBAJ_G0012426.1 mouse_genomes_project 4 38240240 38249799 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0068739.1 MGP_CBAJ_G0028764.1 mouse_genomes_project 4 157972242 157983500 - MGP_CBAJ_P0068739 Gm438 protein_coding protein_coding MGP_CBAJ_T0064473.1 MGP_CBAJ_G0027772.1 mouse_genomes_project 4 23609051 23615970 + MGP_CBAJ_P0064473 Ndufaf4 protein_coding protein_coding MGP_CBAJ_T0064474.1 MGP_CBAJ_G0027772.1 mouse_genomes_project 4 23609099 23614474 + Ndufaf4 protein_coding processed_transcript MGP_CBAJ_T0064475.1 MGP_CBAJ_G0027772.1 mouse_genomes_project 4 23609144 23614454 + MGP_CBAJ_P0064475 Ndufaf4 protein_coding protein_coding MGP_CBAJ_T0099319.1 MGP_CBAJ_G0037574.1 mouse_genomes_project 4 162270073 162270225 - Gm23303 snRNA snRNA MGP_CBAJ_T0014329.1 MGP_CBAJ_G0012441.1 mouse_genomes_project 4 42027626 42027854 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068434.1 MGP_CBAJ_G0028666.1 mouse_genomes_project 4 150816711 150839766 - MGP_CBAJ_P0068434 Pla2g5 protein_coding protein_coding MGP_CBAJ_T0068435.1 MGP_CBAJ_G0028666.1 mouse_genomes_project 4 150816711 150839765 - MGP_CBAJ_P0068435 Pla2g5 protein_coding protein_coding MGP_CBAJ_T0068436.1 MGP_CBAJ_G0028666.1 mouse_genomes_project 4 150816716 150895239 - MGP_CBAJ_P0068436 Pla2g5 protein_coding protein_coding MGP_CBAJ_T0068437.1 MGP_CBAJ_G0028666.1 mouse_genomes_project 4 150817816 150832609 - MGP_CBAJ_P0068437 Pla2g5 protein_coding protein_coding MGP_CBAJ_T0068438.1 MGP_CBAJ_G0028666.1 mouse_genomes_project 4 150818022 150832655 - Pla2g5 protein_coding processed_transcript MGP_CBAJ_T0068439.1 MGP_CBAJ_G0028666.1 mouse_genomes_project 4 150822063 150839767 - Pla2g5 protein_coding processed_transcript MGP_CBAJ_T0068440.1 MGP_CBAJ_G0028666.1 mouse_genomes_project 4 150822077 150839738 - Pla2g5 protein_coding processed_transcript MGP_CBAJ_T0068441.1 MGP_CBAJ_G0028666.1 mouse_genomes_project 4 150823686 150830251 - Pla2g5 protein_coding processed_transcript MGP_CBAJ_T0068442.1 MGP_CBAJ_G0028666.1 mouse_genomes_project 4 150887836 150895219 - Pla2g5 protein_coding processed_transcript MGP_CBAJ_T0099318.1 MGP_CBAJ_G0037573.1 mouse_genomes_project 4 157966299 157966465 - Gm25938 snRNA snRNA MGP_CBAJ_T0007927.1 MGP_CBAJ_G0006464.1 mouse_genomes_project 4 167342352 167345328 + Gm833 lincRNA lincRNA MGP_CBAJ_T0064235.1 MGP_CBAJ_G0027716.1 mouse_genomes_project 4 6304227 6317195 + Clvs1 protein_coding processed_transcript MGP_CBAJ_T0064236.1 MGP_CBAJ_G0027716.1 mouse_genomes_project 4 6304251 6399057 + Clvs1 protein_coding processed_transcript MGP_CBAJ_T0064237.1 MGP_CBAJ_G0027716.1 mouse_genomes_project 4 6304251 6508171 + MGP_CBAJ_P0064237 Clvs1 protein_coding protein_coding MGP_CBAJ_T0064238.1 MGP_CBAJ_G0027716.1 mouse_genomes_project 4 6304264 6317193 + Clvs1 protein_coding processed_transcript MGP_CBAJ_T0064239.1 MGP_CBAJ_G0027716.1 mouse_genomes_project 4 6304281 6316355 + Clvs1 protein_coding processed_transcript MGP_CBAJ_T0064240.1 MGP_CBAJ_G0027716.1 mouse_genomes_project 4 6306385 6508171 + MGP_CBAJ_P0064240 Clvs1 protein_coding protein_coding MGP_CBAJ_T0064241.1 MGP_CBAJ_G0027716.1 mouse_genomes_project 4 6353711 6486322 + Clvs1 protein_coding processed_transcript MGP_CBAJ_T0064242.1 MGP_CBAJ_G0027716.1 mouse_genomes_project 4 6379509 6486359 + Clvs1 protein_coding processed_transcript MGP_CBAJ_T0007790.1 MGP_CBAJ_G0006362.1 mouse_genomes_project 4 98306338 98307437 - 4930577H14Rik lincRNA lincRNA MGP_CBAJ_T0099281.1 MGP_CBAJ_G0037536.1 mouse_genomes_project 4 108618980 108619084 + Gm24468 snRNA snRNA MGP_CBAJ_T0065996.1 MGP_CBAJ_G0028133.1 mouse_genomes_project 4 104719113 104965522 + MGP_CBAJ_P0065996 Nfia protein_coding protein_coding MGP_CBAJ_T0065997.1 MGP_CBAJ_G0028133.1 mouse_genomes_project 4 104726719 105093117 + MGP_CBAJ_P0065997 Nfia protein_coding protein_coding MGP_CBAJ_T0065998.1 MGP_CBAJ_G0028133.1 mouse_genomes_project 4 104726737 105093120 + MGP_CBAJ_P0065998 Nfia protein_coding protein_coding MGP_CBAJ_T0065999.1 MGP_CBAJ_G0028133.1 mouse_genomes_project 4 104726914 105093117 + MGP_CBAJ_P0065999 Nfia protein_coding protein_coding MGP_CBAJ_T0066000.1 MGP_CBAJ_G0028133.1 mouse_genomes_project 4 104726930 105093117 + MGP_CBAJ_P0066000 Nfia protein_coding protein_coding MGP_CBAJ_T0066001.1 MGP_CBAJ_G0028133.1 mouse_genomes_project 4 104726945 105093117 + MGP_CBAJ_P0066001 Nfia protein_coding protein_coding MGP_CBAJ_T0066002.1 MGP_CBAJ_G0028133.1 mouse_genomes_project 4 104834679 105030160 + MGP_CBAJ_P0066002 Nfia protein_coding protein_coding MGP_CBAJ_T0066003.1 MGP_CBAJ_G0028133.1 mouse_genomes_project 4 104869070 105007198 + Nfia protein_coding processed_transcript MGP_CBAJ_T0067012.1 MGP_CBAJ_G0028336.1 mouse_genomes_project 4 127585246 127665371 - MGP_CBAJ_P0067012 Cfap57 protein_coding protein_coding MGP_CBAJ_T0067013.1 MGP_CBAJ_G0028336.1 mouse_genomes_project 4 127585391 127664999 - MGP_CBAJ_P0067013 Cfap57 protein_coding protein_coding MGP_CBAJ_T0101890.1 MGP_CBAJ_G0039921.1 mouse_genomes_project 4 92461942 92466731 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0068647.1 MGP_CBAJ_G0028716.1 mouse_genomes_project 4 154222136 154275372 - MGP_CBAJ_P0068647 protein_coding protein_coding MGP_CBAJ_T0068648.1 MGP_CBAJ_G0028716.1 mouse_genomes_project 4 154228160 154275372 - MGP_CBAJ_P0068648 protein_coding protein_coding MGP_CBAJ_T0066539.1 MGP_CBAJ_G0028241.1 mouse_genomes_project 4 118772840 118857576 - MGP_CBAJ_P0066539 Elavl4 protein_coding protein_coding MGP_CBAJ_T0066540.1 MGP_CBAJ_G0028241.1 mouse_genomes_project 4 118772855 118862780 - MGP_CBAJ_P0066540 Elavl4 protein_coding protein_coding MGP_CBAJ_T0066541.1 MGP_CBAJ_G0028241.1 mouse_genomes_project 4 118772855 118860317 - MGP_CBAJ_P0066541 Elavl4 protein_coding protein_coding MGP_CBAJ_T0066542.1 MGP_CBAJ_G0028241.1 mouse_genomes_project 4 118772855 118857576 - MGP_CBAJ_P0066542 Elavl4 protein_coding protein_coding MGP_CBAJ_T0066543.1 MGP_CBAJ_G0028241.1 mouse_genomes_project 4 118772855 118925397 - MGP_CBAJ_P0066543 Elavl4 protein_coding protein_coding MGP_CBAJ_T0066544.1 MGP_CBAJ_G0028241.1 mouse_genomes_project 4 118772855 118856938 - MGP_CBAJ_P0066544 Elavl4 protein_coding protein_coding MGP_CBAJ_T0066545.1 MGP_CBAJ_G0028241.1 mouse_genomes_project 4 118772855 118856938 - MGP_CBAJ_P0066545 Elavl4 protein_coding protein_coding MGP_CBAJ_T0066546.1 MGP_CBAJ_G0028241.1 mouse_genomes_project 4 118775476 118792241 - Elavl4 protein_coding processed_transcript MGP_CBAJ_T0066547.1 MGP_CBAJ_G0028241.1 mouse_genomes_project 4 118782347 118856665 - MGP_CBAJ_P0066547 Elavl4 protein_coding protein_coding MGP_CBAJ_T0066548.1 MGP_CBAJ_G0028241.1 mouse_genomes_project 4 118794673 118844193 - Elavl4 protein_coding processed_transcript MGP_CBAJ_T0066549.1 MGP_CBAJ_G0028241.1 mouse_genomes_project 4 118795702 118857576 - MGP_CBAJ_P0066549 Elavl4 protein_coding protein_coding MGP_CBAJ_T0066550.1 MGP_CBAJ_G0028241.1 mouse_genomes_project 4 118820200 118860939 - MGP_CBAJ_P0066550 Elavl4 protein_coding protein_coding MGP_CBAJ_T0068907.1 MGP_CBAJ_G0028801.1 mouse_genomes_project 4 163178229 163324150 - MGP_CBAJ_P0068907 Kif1b protein_coding protein_coding MGP_CBAJ_T0068908.1 MGP_CBAJ_G0028801.1 mouse_genomes_project 4 163179928 163190288 - Kif1b protein_coding retained_intron MGP_CBAJ_T0068909.1 MGP_CBAJ_G0028801.1 mouse_genomes_project 4 163180773 163206083 - MGP_CBAJ_P0068909 Kif1b protein_coding protein_coding MGP_CBAJ_T0068910.1 MGP_CBAJ_G0028801.1 mouse_genomes_project 4 163182146 163323964 - MGP_CBAJ_P0068910 Kif1b protein_coding protein_coding MGP_CBAJ_T0068911.1 MGP_CBAJ_G0028801.1 mouse_genomes_project 4 163216773 163224003 - Kif1b protein_coding retained_intron MGP_CBAJ_T0068912.1 MGP_CBAJ_G0028801.1 mouse_genomes_project 4 163225238 163233770 - Kif1b protein_coding retained_intron MGP_CBAJ_T0068913.1 MGP_CBAJ_G0028801.1 mouse_genomes_project 4 163244249 163324081 - MGP_CBAJ_P0068913 Kif1b protein_coding protein_coding MGP_CBAJ_T0068914.1 MGP_CBAJ_G0028801.1 mouse_genomes_project 4 163247519 163323971 - MGP_CBAJ_P0068914 Kif1b protein_coding unknown_likely_coding MGP_CBAJ_T0068915.1 MGP_CBAJ_G0028801.1 mouse_genomes_project 4 163256110 163258732 - Kif1b protein_coding retained_intron MGP_CBAJ_T0068916.1 MGP_CBAJ_G0028801.1 mouse_genomes_project 4 163275442 163324151 - Kif1b protein_coding retained_intron MGP_CBAJ_T0068917.1 MGP_CBAJ_G0028801.1 mouse_genomes_project 4 163305572 163324122 - Kif1b protein_coding retained_intron MGP_CBAJ_T0068604.1 MGP_CBAJ_G0028707.1 mouse_genomes_project 4 153845957 153860789 - MGP_CBAJ_P0068604 Clcnkb protein_coding protein_coding MGP_CBAJ_T0068605.1 MGP_CBAJ_G0028707.1 mouse_genomes_project 4 153845957 153860789 - MGP_CBAJ_P0068605 Clcnkb protein_coding protein_coding MGP_CBAJ_T0068606.1 MGP_CBAJ_G0028707.1 mouse_genomes_project 4 153845957 153846962 - MGP_CBAJ_P0068606 Clcnkb protein_coding protein_coding MGP_CBAJ_T0068607.1 MGP_CBAJ_G0028707.1 mouse_genomes_project 4 153859070 153860736 - Clcnkb protein_coding processed_transcript MGP_CBAJ_T0068161.1 MGP_CBAJ_G0028602.1 mouse_genomes_project 4 146352035 146439389 - MGP_CBAJ_P0068161 Clic4 protein_coding unknown_likely_coding MGP_CBAJ_T0068162.1 MGP_CBAJ_G0028602.1 mouse_genomes_project 4 146377518 146507190 - Clic4 protein_coding retained_intron MGP_CBAJ_T0068240.1 MGP_CBAJ_G0028619.1 mouse_genomes_project 4 147324219 147339216 - MGP_CBAJ_P0068240 Pithd1 protein_coding protein_coding MGP_CBAJ_T0068241.1 MGP_CBAJ_G0028619.1 mouse_genomes_project 4 147324825 147337888 - Pithd1 protein_coding processed_transcript MGP_CBAJ_T0068242.1 MGP_CBAJ_G0028619.1 mouse_genomes_project 4 147325153 147331089 - Pithd1 protein_coding retained_intron MGP_CBAJ_T0068243.1 MGP_CBAJ_G0028619.1 mouse_genomes_project 4 147325155 147338274 - MGP_CBAJ_P0068243 Pithd1 protein_coding protein_coding MGP_CBAJ_T0068244.1 MGP_CBAJ_G0028619.1 mouse_genomes_project 4 147325966 147338869 - MGP_CBAJ_P0068244 Pithd1 protein_coding protein_coding MGP_CBAJ_T0068245.1 MGP_CBAJ_G0028619.1 mouse_genomes_project 4 147330516 147339033 - Pithd1 protein_coding retained_intron MGP_CBAJ_T0068246.1 MGP_CBAJ_G0028619.1 mouse_genomes_project 4 147338365 147339039 - Pithd1 protein_coding processed_transcript MGP_CBAJ_T0014403.1 MGP_CBAJ_G0012515.1 mouse_genomes_project 4 78467264 78468060 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0066458.1 MGP_CBAJ_G0028224.1 mouse_genomes_project 4 117035300 117194159 - MGP_CBAJ_P0066458 protein_coding protein_coding MGP_CBAJ_T0066459.1 MGP_CBAJ_G0028224.1 mouse_genomes_project 4 117035301 117193874 - MGP_CBAJ_P0066459 protein_coding protein_coding MGP_CBAJ_T0066460.1 MGP_CBAJ_G0028224.1 mouse_genomes_project 4 117037090 117129542 - MGP_CBAJ_P0066460 protein_coding protein_coding MGP_CBAJ_T0100517.1 MGP_CBAJ_G0038772.1 mouse_genomes_project 4 19672186 19672271 + Gm25977 snoRNA snoRNA MGP_CBAJ_T0066761.1 MGP_CBAJ_G0028289.1 mouse_genomes_project 4 125299856 125304150 - MGP_CBAJ_P0066761 Tmem69 protein_coding protein_coding MGP_CBAJ_T0066762.1 MGP_CBAJ_G0028289.1 mouse_genomes_project 4 125300128 125301329 - Tmem69 protein_coding processed_transcript MGP_CBAJ_T0066763.1 MGP_CBAJ_G0028289.1 mouse_genomes_project 4 125301168 125304149 - MGP_CBAJ_P0066763 Tmem69 protein_coding protein_coding MGP_CBAJ_T0101891.1 MGP_CBAJ_G0039922.1 mouse_genomes_project 4 94663305 94664993 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0065046.1 MGP_CBAJ_G0027895.1 mouse_genomes_project 4 45077383 45079324 + MGP_CBAJ_P0065046 Ccin protein_coding protein_coding MGP_CBAJ_T0068929.1 MGP_CBAJ_G0028803.1 mouse_genomes_project 4 163488632 163496409 - MGP_CBAJ_P0068929 Rbp7 protein_coding protein_coding MGP_CBAJ_T0068930.1 MGP_CBAJ_G0028803.1 mouse_genomes_project 4 163488632 163494854 - MGP_CBAJ_P0068930 Rbp7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068931.1 MGP_CBAJ_G0028803.1 mouse_genomes_project 4 163488648 163496401 - Rbp7 protein_coding processed_transcript MGP_CBAJ_T0007838.1 MGP_CBAJ_G0006401.1 mouse_genomes_project 4 133960919 133969544 - 1700021L23Rik lincRNA lincRNA MGP_CBAJ_T0101913.1 MGP_CBAJ_G0039944.1 mouse_genomes_project 4 130798985 130804134 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0014613.1 MGP_CBAJ_G0012725.1 mouse_genomes_project 4 163140711 163141706 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064210.1 MGP_CBAJ_G0027711.1 mouse_genomes_project 4 3148644 3210015 - Nsmaf protein_coding retained_intron MGP_CBAJ_T0064211.1 MGP_CBAJ_G0027711.1 mouse_genomes_project 4 3148644 3210015 - MGP_CBAJ_P0064211 Nsmaf protein_coding protein_coding MGP_CBAJ_T0064212.1 MGP_CBAJ_G0027711.1 mouse_genomes_project 4 3148848 3151444 - Nsmaf protein_coding retained_intron MGP_CBAJ_T0064213.1 MGP_CBAJ_G0027711.1 mouse_genomes_project 4 3149206 3209840 - Nsmaf protein_coding processed_transcript MGP_CBAJ_T0064214.1 MGP_CBAJ_G0027711.1 mouse_genomes_project 4 3158819 3209999 - Nsmaf protein_coding processed_transcript MGP_CBAJ_T0064215.1 MGP_CBAJ_G0027711.1 mouse_genomes_project 4 3161438 3176276 - Nsmaf protein_coding retained_intron MGP_CBAJ_T0064216.1 MGP_CBAJ_G0027711.1 mouse_genomes_project 4 3176857 3184049 - Nsmaf protein_coding retained_intron MGP_CBAJ_T0064217.1 MGP_CBAJ_G0027711.1 mouse_genomes_project 4 3180735 3209323 - Nsmaf protein_coding processed_transcript MGP_CBAJ_T0064218.1 MGP_CBAJ_G0027711.1 mouse_genomes_project 4 3182014 3198120 - Nsmaf protein_coding processed_transcript MGP_CBAJ_T0064219.1 MGP_CBAJ_G0027711.1 mouse_genomes_project 4 3184622 3209841 - MGP_CBAJ_P0064219 Nsmaf protein_coding protein_coding MGP_CBAJ_T0064220.1 MGP_CBAJ_G0027711.1 mouse_genomes_project 4 3189263 3196192 - Nsmaf protein_coding processed_transcript MGP_CBAJ_T0099253.1 MGP_CBAJ_G0037508.1 mouse_genomes_project 4 41782570 41782677 + Gm25637 snRNA snRNA MGP_CBAJ_T0099297.1 MGP_CBAJ_G0037552.1 mouse_genomes_project 4 130246547 130246651 + Gm24678 snRNA snRNA MGP_CBAJ_T0014440.1 MGP_CBAJ_G0012552.1 mouse_genomes_project 4 94194208 94194483 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100578.1 MGP_CBAJ_G0038833.1 mouse_genomes_project 4 136639297 136639427 - Gm24161 snoRNA snoRNA MGP_CBAJ_T0064820.1 MGP_CBAJ_G0027856.1 mouse_genomes_project 4 43801930 43808101 - MGP_CBAJ_P0064820 Fam205c protein_coding protein_coding MGP_CBAJ_T0064821.1 MGP_CBAJ_G0027856.1 mouse_genomes_project 4 43802130 43808093 - MGP_CBAJ_P0064821 Fam205c protein_coding protein_coding MGP_CBAJ_T0064822.1 MGP_CBAJ_G0027856.1 mouse_genomes_project 4 43805430 43807618 - Fam205c protein_coding processed_transcript MGP_CBAJ_T0064823.1 MGP_CBAJ_G0027856.1 mouse_genomes_project 4 43805618 43808132 - Fam205c protein_coding processed_transcript MGP_CBAJ_T0014609.1 MGP_CBAJ_G0012721.1 mouse_genomes_project 4 161616647 161616980 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068538.1 MGP_CBAJ_G0028692.1 mouse_genomes_project 4 153100962 153137226 - MGP_CBAJ_P0068538 Padi1 protein_coding protein_coding MGP_CBAJ_T0068155.1 MGP_CBAJ_G0028601.1 mouse_genomes_project 4 146280719 146345591 + MGP_CBAJ_P0068155 Runx3 protein_coding protein_coding MGP_CBAJ_T0068156.1 MGP_CBAJ_G0028601.1 mouse_genomes_project 4 146314924 146343822 + MGP_CBAJ_P0068156 Runx3 protein_coding protein_coding MGP_CBAJ_T0068157.1 MGP_CBAJ_G0028601.1 mouse_genomes_project 4 146317961 146320607 + Runx3 protein_coding retained_intron MGP_CBAJ_T0068158.1 MGP_CBAJ_G0028601.1 mouse_genomes_project 4 146318183 146320369 + Runx3 protein_coding processed_transcript MGP_CBAJ_T0068159.1 MGP_CBAJ_G0028601.1 mouse_genomes_project 4 146318528 146320424 + Runx3 protein_coding processed_transcript MGP_CBAJ_T0068160.1 MGP_CBAJ_G0028601.1 mouse_genomes_project 4 146319433 146320340 + Runx3 protein_coding processed_transcript MGP_CBAJ_T0064552.1 MGP_CBAJ_G0027791.1 mouse_genomes_project 4 32952986 32984457 + MGP_CBAJ_P0064552 Srsf12 protein_coding protein_coding MGP_CBAJ_T0064553.1 MGP_CBAJ_G0027791.1 mouse_genomes_project 4 32953258 32982410 + MGP_CBAJ_P0064553 Srsf12 protein_coding protein_coding MGP_CBAJ_T0065415.1 MGP_CBAJ_G0027982.1 mouse_genomes_project 4 59969273 60086512 - MGP_CBAJ_P0065415 Ptpn3 protein_coding protein_coding MGP_CBAJ_T0065416.1 MGP_CBAJ_G0027982.1 mouse_genomes_project 4 59996697 60000406 - Ptpn3 protein_coding processed_transcript MGP_CBAJ_T0065417.1 MGP_CBAJ_G0027982.1 mouse_genomes_project 4 60023320 60085050 - MGP_CBAJ_P0065417 Ptpn3 protein_coding protein_coding MGP_CBAJ_T0065418.1 MGP_CBAJ_G0027982.1 mouse_genomes_project 4 60033171 60085590 - Ptpn3 protein_coding processed_transcript MGP_CBAJ_T0065419.1 MGP_CBAJ_G0027982.1 mouse_genomes_project 4 60043319 60086182 - MGP_CBAJ_P0065419 Ptpn3 protein_coding protein_coding MGP_CBAJ_T0065420.1 MGP_CBAJ_G0027982.1 mouse_genomes_project 4 60048243 60085431 - MGP_CBAJ_P0065420 Ptpn3 protein_coding protein_coding MGP_CBAJ_T0068300.1 MGP_CBAJ_G0028632.1 mouse_genomes_project 4 148106260 148109365 + MGP_CBAJ_P0068300 4930549C01Rik protein_coding protein_coding MGP_CBAJ_T0068728.1 MGP_CBAJ_G0028754.1 mouse_genomes_project 4 157481037 157498546 - MGP_CBAJ_P0068728 Gm13125 protein_coding protein_coding MGP_CBAJ_T0068738.1 MGP_CBAJ_G0028763.1 mouse_genomes_project 4 157899962 157918178 - MGP_CBAJ_P0068738 Gm13178 protein_coding protein_coding MGP_CBAJ_T0065039.1 MGP_CBAJ_G0027892.1 mouse_genomes_project 4 44921878 44933562 + MGP_CBAJ_P0065039 Olfr155 protein_coding protein_coding MGP_CBAJ_T0065040.1 MGP_CBAJ_G0027892.1 mouse_genomes_project 4 44932583 44933755 + MGP_CBAJ_P0065040 Olfr155 protein_coding protein_coding MGP_CBAJ_T0066062.1 MGP_CBAJ_G0028145.1 mouse_genomes_project 4 106972500 106986990 + Alg6 protein_coding retained_intron MGP_CBAJ_T0066063.1 MGP_CBAJ_G0028145.1 mouse_genomes_project 4 106972501 107016946 + Alg6 protein_coding retained_intron MGP_CBAJ_T0066064.1 MGP_CBAJ_G0028145.1 mouse_genomes_project 4 106972501 107018095 + MGP_CBAJ_P0066064 Alg6 protein_coding protein_coding MGP_CBAJ_T0066065.1 MGP_CBAJ_G0028145.1 mouse_genomes_project 4 106972512 107001086 + Alg6 protein_coding processed_transcript MGP_CBAJ_T0066066.1 MGP_CBAJ_G0028145.1 mouse_genomes_project 4 106972512 107007711 + MGP_CBAJ_P0066066 Alg6 protein_coding protein_coding MGP_CBAJ_T0066067.1 MGP_CBAJ_G0028145.1 mouse_genomes_project 4 106972512 107007520 + MGP_CBAJ_P0066067 Alg6 protein_coding protein_coding MGP_CBAJ_T0066068.1 MGP_CBAJ_G0028145.1 mouse_genomes_project 4 106975955 106993980 + Alg6 protein_coding retained_intron MGP_CBAJ_T0101898.1 MGP_CBAJ_G0039929.1 mouse_genomes_project 4 102992963 102993141 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0007822.1 MGP_CBAJ_G0006386.1 mouse_genomes_project 4 115995777 116001098 + Gm12907 lincRNA lincRNA MGP_CBAJ_T0065322.1 MGP_CBAJ_G0027955.1 mouse_genomes_project 4 53295814 53306726 + Cylc2 protein_coding processed_transcript MGP_CBAJ_T0065323.1 MGP_CBAJ_G0027955.1 mouse_genomes_project 4 53295814 53307581 + MGP_CBAJ_P0065323 Cylc2 protein_coding protein_coding MGP_CBAJ_T0065324.1 MGP_CBAJ_G0027955.1 mouse_genomes_project 4 53295814 53307925 + MGP_CBAJ_P0065324 Cylc2 protein_coding protein_coding MGP_CBAJ_T0065343.1 MGP_CBAJ_G0027963.1 mouse_genomes_project 4 55354490 55364996 + MGP_CBAJ_P0065343 Nipsnap3b protein_coding protein_coding MGP_CBAJ_T0065344.1 MGP_CBAJ_G0027963.1 mouse_genomes_project 4 55354560 55364512 + MGP_CBAJ_P0065344 Nipsnap3b protein_coding protein_coding MGP_CBAJ_T0065345.1 MGP_CBAJ_G0027963.1 mouse_genomes_project 4 55363911 55364441 + Nipsnap3b protein_coding processed_transcript MGP_CBAJ_T0066366.1 MGP_CBAJ_G0028209.1 mouse_genomes_project 4 116125266 116134834 + MGP_CBAJ_P0066366 0610037L13Rik protein_coding protein_coding MGP_CBAJ_T0066367.1 MGP_CBAJ_G0028209.1 mouse_genomes_project 4 116125278 116132430 + MGP_CBAJ_P0066367 0610037L13Rik protein_coding protein_coding MGP_CBAJ_T0066368.1 MGP_CBAJ_G0028209.1 mouse_genomes_project 4 116125302 116132712 + 0610037L13Rik protein_coding processed_transcript MGP_CBAJ_T0066369.1 MGP_CBAJ_G0028209.1 mouse_genomes_project 4 116125316 116132568 + MGP_CBAJ_P0066369 0610037L13Rik protein_coding protein_coding MGP_CBAJ_T0066370.1 MGP_CBAJ_G0028209.1 mouse_genomes_project 4 116125319 116131311 + MGP_CBAJ_P0066370 0610037L13Rik protein_coding protein_coding MGP_CBAJ_T0066371.1 MGP_CBAJ_G0028209.1 mouse_genomes_project 4 116125322 116130799 + MGP_CBAJ_P0066371 0610037L13Rik protein_coding protein_coding MGP_CBAJ_T0066372.1 MGP_CBAJ_G0028209.1 mouse_genomes_project 4 116125351 116132568 + MGP_CBAJ_P0066372 0610037L13Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0066373.1 MGP_CBAJ_G0028209.1 mouse_genomes_project 4 116125352 116133252 + MGP_CBAJ_P0066373 0610037L13Rik protein_coding protein_coding MGP_CBAJ_T0066374.1 MGP_CBAJ_G0028209.1 mouse_genomes_project 4 116125361 116127456 + MGP_CBAJ_P0066374 0610037L13Rik protein_coding protein_coding MGP_CBAJ_T0066375.1 MGP_CBAJ_G0028209.1 mouse_genomes_project 4 116125572 116132614 + 0610037L13Rik protein_coding processed_transcript MGP_CBAJ_T0066376.1 MGP_CBAJ_G0028209.1 mouse_genomes_project 4 116125680 116132507 + 0610037L13Rik protein_coding processed_transcript MGP_CBAJ_T0066377.1 MGP_CBAJ_G0028209.1 mouse_genomes_project 4 116125693 116132568 + 0610037L13Rik protein_coding processed_transcript MGP_CBAJ_T0066378.1 MGP_CBAJ_G0028209.1 mouse_genomes_project 4 116128626 116132503 + 0610037L13Rik protein_coding retained_intron MGP_CBAJ_T0066379.1 MGP_CBAJ_G0028209.1 mouse_genomes_project 4 116128822 116132568 + MGP_CBAJ_P0066379 0610037L13Rik protein_coding protein_coding MGP_CBAJ_T0014289.1 MGP_CBAJ_G0012401.1 mouse_genomes_project 4 28795550 28796058 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101894.1 MGP_CBAJ_G0039925.1 mouse_genomes_project 4 94782986 94783494 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0065913.1 MGP_CBAJ_G0028111.1 mouse_genomes_project 4 101152241 101219914 - MGP_CBAJ_P0065913 Caap1 protein_coding protein_coding MGP_CBAJ_T0065914.1 MGP_CBAJ_G0028111.1 mouse_genomes_project 4 101212656 101219884 - Caap1 protein_coding processed_transcript MGP_CBAJ_T0100542.1 MGP_CBAJ_G0038797.1 mouse_genomes_project 4 59631257 59631390 - Gm25053 snoRNA snoRNA MGP_CBAJ_T0010509.1 MGP_CBAJ_G0008647.1 mouse_genomes_project 4 144583469 144583528 - Mir7227 miRNA miRNA MGP_CBAJ_T0010525.1 MGP_CBAJ_G0008663.1 mouse_genomes_project 4 155909106 155909169 - Mir7021 miRNA miRNA MGP_CBAJ_T0065567.1 MGP_CBAJ_G0028026.1 mouse_genomes_project 4 66327016 66504144 + MGP_CBAJ_P0065567 Zfp618 protein_coding protein_coding MGP_CBAJ_T0065568.1 MGP_CBAJ_G0028026.1 mouse_genomes_project 4 66327016 66478055 + MGP_CBAJ_P0065568 Zfp618 protein_coding protein_coding MGP_CBAJ_T0065569.1 MGP_CBAJ_G0028026.1 mouse_genomes_project 4 66327017 66498471 + MGP_CBAJ_P0065569 Zfp618 protein_coding protein_coding MGP_CBAJ_T0065570.1 MGP_CBAJ_G0028026.1 mouse_genomes_project 4 66482706 66483735 + Zfp618 protein_coding processed_transcript MGP_CBAJ_T0004481.1 MGP_CBAJ_G0003890.1 mouse_genomes_project 4 152296843 152298604 + Gm13029 antisense antisense MGP_CBAJ_T0014365.1 MGP_CBAJ_G0012477.1 mouse_genomes_project 4 57648424 57648785 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004521.1 MGP_CBAJ_G0003920.1 mouse_genomes_project 4 168766724 168772089 - antisense antisense MGP_CBAJ_T0004509.1 MGP_CBAJ_G0003910.1 mouse_genomes_project 4 163361323 163361766 + Ube4bos2 antisense antisense MGP_CBAJ_T0068762.1 MGP_CBAJ_G0028771.1 mouse_genomes_project 4 161575282 161588862 - MGP_CBAJ_P0068762 Miip protein_coding protein_coding MGP_CBAJ_T0068763.1 MGP_CBAJ_G0028771.1 mouse_genomes_project 4 161575290 161588959 - MGP_CBAJ_P0068763 Miip protein_coding protein_coding MGP_CBAJ_T0068764.1 MGP_CBAJ_G0028771.1 mouse_genomes_project 4 161575294 161577265 - Miip protein_coding retained_intron MGP_CBAJ_T0068765.1 MGP_CBAJ_G0028771.1 mouse_genomes_project 4 161575295 161588642 - Miip protein_coding retained_intron MGP_CBAJ_T0068766.1 MGP_CBAJ_G0028771.1 mouse_genomes_project 4 161575295 161588626 - MGP_CBAJ_P0068766 Miip protein_coding protein_coding MGP_CBAJ_T0068767.1 MGP_CBAJ_G0028771.1 mouse_genomes_project 4 161577302 161588809 - Miip protein_coding retained_intron MGP_CBAJ_T0068768.1 MGP_CBAJ_G0028771.1 mouse_genomes_project 4 161578055 161585690 - Miip protein_coding retained_intron MGP_CBAJ_T0068769.1 MGP_CBAJ_G0028771.1 mouse_genomes_project 4 161586278 161588666 - Miip protein_coding retained_intron MGP_CBAJ_T0014548.1 MGP_CBAJ_G0012660.1 mouse_genomes_project 4 130787360 130787685 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007878.1 MGP_CBAJ_G0006425.1 mouse_genomes_project 4 142142154 142158095 - Gm16080 lincRNA lincRNA MGP_CBAJ_T0065292.1 MGP_CBAJ_G0027946.1 mouse_genomes_project 4 51241916 51245503 - MGP_CBAJ_P0065292 Acnat1 protein_coding protein_coding MGP_CBAJ_T0065293.1 MGP_CBAJ_G0027946.1 mouse_genomes_project 4 51244898 51245503 - Acnat1 protein_coding processed_transcript MGP_CBAJ_T0066206.1 MGP_CBAJ_G0028176.1 mouse_genomes_project 4 112718599 112757707 - C8a protein_coding processed_transcript MGP_CBAJ_T0066207.1 MGP_CBAJ_G0028176.1 mouse_genomes_project 4 112718599 112780593 - MGP_CBAJ_P0066207 C8a protein_coding protein_coding MGP_CBAJ_T0066208.1 MGP_CBAJ_G0028176.1 mouse_genomes_project 4 112720429 112780551 - MGP_CBAJ_P0066208 C8a protein_coding protein_coding MGP_CBAJ_T0068366.1 MGP_CBAJ_G0028650.1 mouse_genomes_project 4 149697631 149760933 + MGP_CBAJ_P0068366 Ece1 protein_coding protein_coding MGP_CBAJ_T0068367.1 MGP_CBAJ_G0028650.1 mouse_genomes_project 4 149760549 149782376 + MGP_CBAJ_P0068367 Ece1 protein_coding protein_coding MGP_CBAJ_T0068368.1 MGP_CBAJ_G0028650.1 mouse_genomes_project 4 149760760 149773269 + Ece1 protein_coding processed_transcript MGP_CBAJ_T0068369.1 MGP_CBAJ_G0028650.1 mouse_genomes_project 4 149760804 149819136 + MGP_CBAJ_P0068369 Ece1 protein_coding protein_coding MGP_CBAJ_T0066535.1 MGP_CBAJ_G0028239.1 mouse_genomes_project 4 118188600 118517119 + MGP_CBAJ_P0066535 Faf1 protein_coding protein_coding MGP_CBAJ_T0066536.1 MGP_CBAJ_G0028239.1 mouse_genomes_project 4 118189009 118195360 + Faf1 protein_coding processed_transcript MGP_CBAJ_T0066537.1 MGP_CBAJ_G0028239.1 mouse_genomes_project 4 118378827 118471792 + Faf1 protein_coding processed_transcript MGP_CBAJ_T0004376.1 MGP_CBAJ_G0003811.1 mouse_genomes_project 4 65312381 65314808 + Gm12909 antisense antisense MGP_CBAJ_T0066717.1 MGP_CBAJ_G0028281.1 mouse_genomes_project 4 124794673 124800468 - Rad54l protein_coding processed_transcript MGP_CBAJ_T0066718.1 MGP_CBAJ_G0028281.1 mouse_genomes_project 4 124797325 124826042 - MGP_CBAJ_P0066718 Rad54l protein_coding protein_coding MGP_CBAJ_T0066719.1 MGP_CBAJ_G0028281.1 mouse_genomes_project 4 124797384 124826016 - MGP_CBAJ_P0066719 Rad54l protein_coding protein_coding MGP_CBAJ_T0066720.1 MGP_CBAJ_G0028281.1 mouse_genomes_project 4 124810239 124825339 - Rad54l protein_coding processed_transcript MGP_CBAJ_T0066721.1 MGP_CBAJ_G0028281.1 mouse_genomes_project 4 124811533 124813027 - Rad54l protein_coding processed_transcript MGP_CBAJ_T0066722.1 MGP_CBAJ_G0028281.1 mouse_genomes_project 4 124817918 124826047 - Rad54l protein_coding processed_transcript MGP_CBAJ_T0014265.1 MGP_CBAJ_G0012377.1 mouse_genomes_project 4 23082665 23084381 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0067290.1 MGP_CBAJ_G0028416.1 mouse_genomes_project 4 134477873 134527145 + MGP_CBAJ_P0067290 Mtf1 protein_coding protein_coding MGP_CBAJ_T0067291.1 MGP_CBAJ_G0028416.1 mouse_genomes_project 4 134478318 134527566 + MGP_CBAJ_P0067291 Mtf1 protein_coding protein_coding MGP_CBAJ_T0067292.1 MGP_CBAJ_G0028416.1 mouse_genomes_project 4 134478318 134495755 + MGP_CBAJ_P0067292 Mtf1 protein_coding protein_coding MGP_CBAJ_T0067293.1 MGP_CBAJ_G0028416.1 mouse_genomes_project 4 134478351 134481130 + Mtf1 protein_coding retained_intron MGP_CBAJ_T0067294.1 MGP_CBAJ_G0028416.1 mouse_genomes_project 4 134478447 134480492 + MGP_CBAJ_P0067294 Mtf1 protein_coding protein_coding MGP_CBAJ_T0065987.1 MGP_CBAJ_G0028132.1 mouse_genomes_project 4 104494398 104519822 - E130114P18Rik protein_coding processed_transcript MGP_CBAJ_T0065988.1 MGP_CBAJ_G0028132.1 mouse_genomes_project 4 104494398 104519798 - E130114P18Rik protein_coding processed_transcript MGP_CBAJ_T0065989.1 MGP_CBAJ_G0028132.1 mouse_genomes_project 4 104494398 104519838 - E130114P18Rik protein_coding processed_transcript MGP_CBAJ_T0065990.1 MGP_CBAJ_G0028132.1 mouse_genomes_project 4 104494398 104519809 - MGP_CBAJ_P0065990 E130114P18Rik protein_coding protein_coding MGP_CBAJ_T0065991.1 MGP_CBAJ_G0028132.1 mouse_genomes_project 4 104494398 104727160 - MGP_CBAJ_P0065991 E130114P18Rik protein_coding protein_coding MGP_CBAJ_T0065992.1 MGP_CBAJ_G0028132.1 mouse_genomes_project 4 104494398 104519831 - MGP_CBAJ_P0065992 E130114P18Rik protein_coding protein_coding MGP_CBAJ_T0065993.1 MGP_CBAJ_G0028132.1 mouse_genomes_project 4 104495455 104632665 - MGP_CBAJ_P0065993 E130114P18Rik protein_coding protein_coding MGP_CBAJ_T0065994.1 MGP_CBAJ_G0028132.1 mouse_genomes_project 4 104503094 104519814 - E130114P18Rik protein_coding processed_transcript MGP_CBAJ_T0065995.1 MGP_CBAJ_G0028132.1 mouse_genomes_project 4 104621193 104727190 - E130114P18Rik protein_coding processed_transcript MGP_CBAJ_T0066825.1 MGP_CBAJ_G0028301.1 mouse_genomes_project 4 125700847 125828835 + MGP_CBAJ_P0066825 Zswim5 protein_coding protein_coding MGP_CBAJ_T0067386.1 MGP_CBAJ_G0028438.1 mouse_genomes_project 4 136027723 136040788 + MGP_CBAJ_P0067386 Trappc3 protein_coding protein_coding MGP_CBAJ_T0067387.1 MGP_CBAJ_G0028438.1 mouse_genomes_project 4 136027798 136038871 + Trappc3 protein_coding processed_transcript MGP_CBAJ_T0066780.1 MGP_CBAJ_G0028293.1 mouse_genomes_project 4 125397824 125415315 - MGP_CBAJ_P0066780 Akr1a1 protein_coding protein_coding MGP_CBAJ_T0066781.1 MGP_CBAJ_G0028293.1 mouse_genomes_project 4 125397825 125415031 - Akr1a1 protein_coding processed_transcript MGP_CBAJ_T0066782.1 MGP_CBAJ_G0028293.1 mouse_genomes_project 4 125397825 125399317 - Akr1a1 protein_coding processed_transcript MGP_CBAJ_T0066783.1 MGP_CBAJ_G0028293.1 mouse_genomes_project 4 125400408 125413109 - MGP_CBAJ_P0066783 Akr1a1 protein_coding protein_coding MGP_CBAJ_T0099298.1 MGP_CBAJ_G0037553.1 mouse_genomes_project 4 130449627 130449791 - Gm23540 snRNA snRNA MGP_CBAJ_T0064677.1 MGP_CBAJ_G0027821.1 mouse_genomes_project 4 41665807 41684707 + MGP_CBAJ_P0064677 Chmp5 protein_coding protein_coding MGP_CBAJ_T0068709.1 MGP_CBAJ_G0028740.1 mouse_genomes_project 4 157133587 157171707 + MGP_CBAJ_P0068709 protein_coding protein_coding MGP_CBAJ_T0068711.1 MGP_CBAJ_G0028740.1 mouse_genomes_project 4 157133602 157165773 + protein_coding retained_intron MGP_CBAJ_T0069311.1 MGP_CBAJ_G0028873.1 mouse_genomes_project 4 170107626 170148139 - Ski protein_coding processed_transcript MGP_CBAJ_T0069312.1 MGP_CBAJ_G0028873.1 mouse_genomes_project 4 170107626 170185076 - MGP_CBAJ_P0069312 Ski protein_coding protein_coding MGP_CBAJ_T0069313.1 MGP_CBAJ_G0028873.1 mouse_genomes_project 4 170107626 170185119 - MGP_CBAJ_P0069313 Ski protein_coding protein_coding MGP_CBAJ_T0010530.1 MGP_CBAJ_G0008668.1 mouse_genomes_project 4 167702303 167702398 - Gm25779 miRNA miRNA MGP_CBAJ_T0097818.1 MGP_CBAJ_G0036091.1 mouse_genomes_project 4 154033206 154034916 + pseudogene pseudogene MGP_CBAJ_T0065036.1 MGP_CBAJ_G0027889.1 mouse_genomes_project 4 44831384 44832344 - MGP_CBAJ_P0065036 Olfr159 protein_coding protein_coding MGP_CBAJ_T0065485.1 MGP_CBAJ_G0028001.1 mouse_genomes_project 4 62290555 62291839 - Susd1 protein_coding retained_intron MGP_CBAJ_T0065486.1 MGP_CBAJ_G0028001.1 mouse_genomes_project 4 62290555 62433023 - MGP_CBAJ_P0065486 Susd1 protein_coding protein_coding MGP_CBAJ_T0065487.1 MGP_CBAJ_G0028001.1 mouse_genomes_project 4 62290626 62433023 - MGP_CBAJ_P0065487 Susd1 protein_coding protein_coding MGP_CBAJ_T0065488.1 MGP_CBAJ_G0028001.1 mouse_genomes_project 4 62305084 62308846 - Susd1 protein_coding retained_intron MGP_CBAJ_T0065489.1 MGP_CBAJ_G0028001.1 mouse_genomes_project 4 62307780 62338656 - Susd1 protein_coding retained_intron MGP_CBAJ_T0014195.1 MGP_CBAJ_G0012307.1 mouse_genomes_project 4 185305 185905 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065041.1 MGP_CBAJ_G0027893.1 mouse_genomes_project 4 44953731 45029216 + Reck protein_coding processed_transcript MGP_CBAJ_T0065042.1 MGP_CBAJ_G0027893.1 mouse_genomes_project 4 44953731 45029277 + MGP_CBAJ_P0065042 Reck protein_coding protein_coding MGP_CBAJ_T0065043.1 MGP_CBAJ_G0027893.1 mouse_genomes_project 4 45022463 45026864 + Reck protein_coding processed_transcript MGP_CBAJ_T0100515.1 MGP_CBAJ_G0038770.1 mouse_genomes_project 4 11736060 11736187 + Gm24908 snoRNA snoRNA MGP_CBAJ_T0068455.1 MGP_CBAJ_G0028673.1 mouse_genomes_project 4 151179782 151226310 - MGP_CBAJ_P0068455 Minos1 protein_coding protein_coding MGP_CBAJ_T0068456.1 MGP_CBAJ_G0028673.1 mouse_genomes_project 4 151181756 151183921 - Minos1 protein_coding processed_transcript MGP_CBAJ_T0068457.1 MGP_CBAJ_G0028673.1 mouse_genomes_project 4 151181788 151189233 - Minos1 protein_coding processed_transcript MGP_CBAJ_T0068458.1 MGP_CBAJ_G0028673.1 mouse_genomes_project 4 151181867 151226191 - Minos1 protein_coding processed_transcript MGP_CBAJ_T0100506.1 MGP_CBAJ_G0038761.1 mouse_genomes_project 4 83371 83498 + Gm22541 snoRNA snoRNA MGP_CBAJ_T0101925.1 MGP_CBAJ_G0039956.1 mouse_genomes_project 4 157435861 157436314 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0007689.1 MGP_CBAJ_G0006278.1 mouse_genomes_project 4 143493 155134 - Gm26857 lincRNA lincRNA MGP_CBAJ_T0004390.1 MGP_CBAJ_G0003824.1 mouse_genomes_project 4 101757488 101780609 + Junos antisense antisense MGP_CBAJ_T0004391.1 MGP_CBAJ_G0003824.1 mouse_genomes_project 4 101761276 101771196 + Junos antisense antisense MGP_CBAJ_T0004392.1 MGP_CBAJ_G0003824.1 mouse_genomes_project 4 101761565 101878448 + Junos antisense antisense MGP_CBAJ_T0004393.1 MGP_CBAJ_G0003824.1 mouse_genomes_project 4 101788819 101875637 + Junos antisense antisense MGP_CBAJ_T0004394.1 MGP_CBAJ_G0003824.1 mouse_genomes_project 4 101788966 101851686 + Junos antisense antisense MGP_CBAJ_T0004395.1 MGP_CBAJ_G0003824.1 mouse_genomes_project 4 101806683 101883437 + Junos antisense antisense MGP_CBAJ_T0004396.1 MGP_CBAJ_G0003824.1 mouse_genomes_project 4 101811853 101888104 + Junos antisense antisense MGP_CBAJ_T0004397.1 MGP_CBAJ_G0003824.1 mouse_genomes_project 4 101837908 101889511 + Junos antisense antisense MGP_CBAJ_T0014221.1 MGP_CBAJ_G0012333.1 mouse_genomes_project 4 10889819 10890191 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0066991.1 MGP_CBAJ_G0028330.1 mouse_genomes_project 4 127457388 127461915 + MGP_CBAJ_P0066991 Elovl1 protein_coding protein_coding MGP_CBAJ_T0066992.1 MGP_CBAJ_G0028330.1 mouse_genomes_project 4 127457421 127458122 + Elovl1 protein_coding processed_transcript MGP_CBAJ_T0066993.1 MGP_CBAJ_G0028330.1 mouse_genomes_project 4 127457465 127461242 + Elovl1 protein_coding processed_transcript MGP_CBAJ_T0066994.1 MGP_CBAJ_G0028330.1 mouse_genomes_project 4 127457499 127460366 + Elovl1 protein_coding processed_transcript MGP_CBAJ_T0100557.1 MGP_CBAJ_G0038812.1 mouse_genomes_project 4 88587708 88587827 + Gm24884 snoRNA snoRNA MGP_CBAJ_T0014227.1 MGP_CBAJ_G0012339.1 mouse_genomes_project 4 13127684 13128107 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0064405.1 MGP_CBAJ_G0027760.1 mouse_genomes_project 4 18343339 19090917 - MGP_CBAJ_P0064405 Nkain3 protein_coding protein_coding MGP_CBAJ_T0064406.1 MGP_CBAJ_G0027760.1 mouse_genomes_project 4 18485151 19091212 - MGP_CBAJ_P0064406 Nkain3 protein_coding protein_coding MGP_CBAJ_T0065827.1 MGP_CBAJ_G0028079.1 mouse_genomes_project 4 92602801 92686361 + MGP_CBAJ_P0065827 Dennd4c protein_coding protein_coding MGP_CBAJ_T0065828.1 MGP_CBAJ_G0028079.1 mouse_genomes_project 4 92602801 92707852 + MGP_CBAJ_P0065828 Dennd4c protein_coding protein_coding MGP_CBAJ_T0065829.1 MGP_CBAJ_G0028079.1 mouse_genomes_project 4 92626153 92629919 + Dennd4c protein_coding processed_transcript MGP_CBAJ_T0067462.1 MGP_CBAJ_G0028454.1 mouse_genomes_project 4 136949744 137016720 + MGP_CBAJ_P0067462 Zmym6 protein_coding protein_coding MGP_CBAJ_T0067463.1 MGP_CBAJ_G0028454.1 mouse_genomes_project 4 136949758 137016722 + MGP_CBAJ_P0067463 Zmym6 protein_coding protein_coding MGP_CBAJ_T0067464.1 MGP_CBAJ_G0028454.1 mouse_genomes_project 4 136949803 136998375 + Zmym6 protein_coding processed_transcript MGP_CBAJ_T0067465.1 MGP_CBAJ_G0028454.1 mouse_genomes_project 4 136950652 136975371 + Zmym6 protein_coding processed_transcript MGP_CBAJ_T0067466.1 MGP_CBAJ_G0028454.1 mouse_genomes_project 4 136962664 136975514 + Zmym6 protein_coding processed_transcript MGP_CBAJ_T0067467.1 MGP_CBAJ_G0028454.1 mouse_genomes_project 4 136994701 136998253 + Zmym6 protein_coding processed_transcript MGP_CBAJ_T0000314.1 MGP_CBAJ_G0000259.1 mouse_genomes_project 4 85223926 85223989 + mt-Tt Mt_tRNA Mt_tRNA MGP_CBAJ_T0007839.1 MGP_CBAJ_G0006402.1 mouse_genomes_project 4 133984361 133990500 - 4933435F18Rik lincRNA lincRNA MGP_CBAJ_T0007840.1 MGP_CBAJ_G0006402.1 mouse_genomes_project 4 133989397 133990459 - 4933435F18Rik lincRNA lincRNA MGP_CBAJ_T0065847.1 MGP_CBAJ_G0028083.1 mouse_genomes_project 4 93781829 94073274 - MGP_CBAJ_P0065847 Mllt3 protein_coding protein_coding MGP_CBAJ_T0065848.1 MGP_CBAJ_G0028083.1 mouse_genomes_project 4 93785600 93822275 - MGP_CBAJ_P0065848 Mllt3 protein_coding protein_coding MGP_CBAJ_T0065849.1 MGP_CBAJ_G0028083.1 mouse_genomes_project 4 93785637 93822246 - MGP_CBAJ_P0065849 Mllt3 protein_coding protein_coding MGP_CBAJ_T0065850.1 MGP_CBAJ_G0028083.1 mouse_genomes_project 4 93807872 94073459 - Mllt3 protein_coding processed_transcript MGP_CBAJ_T0065851.1 MGP_CBAJ_G0028083.1 mouse_genomes_project 4 93849026 93891634 - Mllt3 protein_coding processed_transcript MGP_CBAJ_T0065852.1 MGP_CBAJ_G0028083.1 mouse_genomes_project 4 93853664 94066582 - Mllt3 protein_coding retained_intron MGP_CBAJ_T0065853.1 MGP_CBAJ_G0028083.1 mouse_genomes_project 4 93857329 94066582 - MGP_CBAJ_P0065853 Mllt3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065617.1 MGP_CBAJ_G0028039.1 mouse_genomes_project 4 67295649 67329242 - MGP_CBAJ_P0065617 Tnfsf8 protein_coding protein_coding MGP_CBAJ_T0010517.1 MGP_CBAJ_G0008655.1 mouse_genomes_project 4 150031472 150031556 + Mir6399 miRNA miRNA MGP_CBAJ_T0065512.1 MGP_CBAJ_G0028007.1 mouse_genomes_project 4 62947976 62957917 - MGP_CBAJ_P0065512 Slc46a2 protein_coding protein_coding MGP_CBAJ_T0068702.1 MGP_CBAJ_G0028734.1 mouse_genomes_project 4 156540708 156546880 - MGP_CBAJ_P0068702 Gm13089 protein_coding protein_coding MGP_CBAJ_T0066912.1 MGP_CBAJ_G0028316.1 mouse_genomes_project 4 126656442 126658903 + MGP_CBAJ_P0066912 Gm12845 protein_coding protein_coding MGP_CBAJ_T0066441.1 MGP_CBAJ_G0028221.1 mouse_genomes_project 4 116955901 116959743 - Prpf38a protein_coding processed_transcript MGP_CBAJ_T0066442.1 MGP_CBAJ_G0028221.1 mouse_genomes_project 4 116957599 116976978 - MGP_CBAJ_P0066442 Prpf38a protein_coding protein_coding MGP_CBAJ_T0066443.1 MGP_CBAJ_G0028221.1 mouse_genomes_project 4 116957602 116971225 - Prpf38a protein_coding processed_transcript MGP_CBAJ_T0065408.1 MGP_CBAJ_G0027981.1 mouse_genomes_project 4 59753421 59914067 - MGP_CBAJ_P0065408 protein_coding protein_coding MGP_CBAJ_T0065409.1 MGP_CBAJ_G0027981.1 mouse_genomes_project 4 59757123 59793835 - MGP_CBAJ_P0065409 protein_coding protein_coding MGP_CBAJ_T0065410.1 MGP_CBAJ_G0027981.1 mouse_genomes_project 4 59830114 59914067 - MGP_CBAJ_P0065410 protein_coding protein_coding MGP_CBAJ_T0065411.1 MGP_CBAJ_G0027981.1 mouse_genomes_project 4 59831420 59838987 - protein_coding processed_transcript MGP_CBAJ_T0065412.1 MGP_CBAJ_G0027981.1 mouse_genomes_project 4 59841732 59871758 - protein_coding processed_transcript MGP_CBAJ_T0065413.1 MGP_CBAJ_G0027981.1 mouse_genomes_project 4 59847250 59908960 - protein_coding processed_transcript MGP_CBAJ_T0065414.1 MGP_CBAJ_G0027981.1 mouse_genomes_project 4 59856345 59891116 - protein_coding processed_transcript MGP_CBAJ_T0067304.1 MGP_CBAJ_G0028419.1 mouse_genomes_project 4 134533013 134539938 - MGP_CBAJ_P0067304 Maneal protein_coding protein_coding MGP_CBAJ_T0066307.1 MGP_CBAJ_G0028199.1 mouse_genomes_project 4 115387202 115396084 + MGP_CBAJ_P0066307 Ldlrad1 protein_coding protein_coding MGP_CBAJ_T0066938.1 MGP_CBAJ_G0028321.1 mouse_genomes_project 4 126834955 126837866 - MGP_CBAJ_P0066938 Atp6v0b protein_coding protein_coding MGP_CBAJ_T0066939.1 MGP_CBAJ_G0028321.1 mouse_genomes_project 4 126834961 126836526 - Atp6v0b protein_coding retained_intron MGP_CBAJ_T0066940.1 MGP_CBAJ_G0028321.1 mouse_genomes_project 4 126835076 126836432 - Atp6v0b protein_coding retained_intron MGP_CBAJ_T0066941.1 MGP_CBAJ_G0028321.1 mouse_genomes_project 4 126835795 126837268 - Atp6v0b protein_coding retained_intron MGP_CBAJ_T0066942.1 MGP_CBAJ_G0028321.1 mouse_genomes_project 4 126835862 126837190 - MGP_CBAJ_P0066942 Atp6v0b protein_coding protein_coding MGP_CBAJ_T0066943.1 MGP_CBAJ_G0028321.1 mouse_genomes_project 4 126836266 126837917 - MGP_CBAJ_P0066943 Atp6v0b protein_coding protein_coding MGP_CBAJ_T0066944.1 MGP_CBAJ_G0028321.1 mouse_genomes_project 4 126836912 126837963 - MGP_CBAJ_P0066944 Atp6v0b protein_coding protein_coding MGP_CBAJ_T0066418.1 MGP_CBAJ_G0028215.1 mouse_genomes_project 4 116482205 116523145 - MGP_CBAJ_P0066418 Zyg11a protein_coding protein_coding MGP_CBAJ_T0066419.1 MGP_CBAJ_G0028215.1 mouse_genomes_project 4 116482205 116523120 - MGP_CBAJ_P0066419 Zyg11a protein_coding protein_coding MGP_CBAJ_T0068659.1 MGP_CBAJ_G0028721.1 mouse_genomes_project 4 154384209 154391536 - Cela2a protein_coding retained_intron MGP_CBAJ_T0068660.1 MGP_CBAJ_G0028721.1 mouse_genomes_project 4 154384209 154397664 - MGP_CBAJ_P0068660 Cela2a protein_coding protein_coding MGP_CBAJ_T0068662.1 MGP_CBAJ_G0028721.1 mouse_genomes_project 4 154396458 154397505 - Cela2a protein_coding retained_intron MGP_CBAJ_T0067881.1 MGP_CBAJ_G0028538.1 mouse_genomes_project 4 143270000 143325389 + MGP_CBAJ_P0067881 Eya3 protein_coding protein_coding MGP_CBAJ_T0067882.1 MGP_CBAJ_G0028538.1 mouse_genomes_project 4 143270059 143358076 + MGP_CBAJ_P0067882 Eya3 protein_coding protein_coding MGP_CBAJ_T0067883.1 MGP_CBAJ_G0028538.1 mouse_genomes_project 4 143270069 143358073 + MGP_CBAJ_P0067883 Eya3 protein_coding protein_coding MGP_CBAJ_T0067884.1 MGP_CBAJ_G0028538.1 mouse_genomes_project 4 143270071 143332032 + Eya3 protein_coding processed_transcript MGP_CBAJ_T0067885.1 MGP_CBAJ_G0028538.1 mouse_genomes_project 4 143270077 143323601 + Eya3 protein_coding processed_transcript MGP_CBAJ_T0067886.1 MGP_CBAJ_G0028538.1 mouse_genomes_project 4 143270092 143355413 + Eya3 protein_coding processed_transcript MGP_CBAJ_T0067887.1 MGP_CBAJ_G0028538.1 mouse_genomes_project 4 143270095 143358082 + MGP_CBAJ_P0067887 Eya3 protein_coding protein_coding MGP_CBAJ_T0067888.1 MGP_CBAJ_G0028538.1 mouse_genomes_project 4 143270098 143356755 + Eya3 protein_coding processed_transcript MGP_CBAJ_T0067889.1 MGP_CBAJ_G0028538.1 mouse_genomes_project 4 143270130 143325574 + Eya3 protein_coding processed_transcript MGP_CBAJ_T0067890.1 MGP_CBAJ_G0028538.1 mouse_genomes_project 4 143287687 143356721 + Eya3 protein_coding processed_transcript MGP_CBAJ_T0067891.1 MGP_CBAJ_G0028538.1 mouse_genomes_project 4 143333963 143344619 + Eya3 protein_coding processed_transcript MGP_CBAJ_T0067892.1 MGP_CBAJ_G0028538.1 mouse_genomes_project 4 143337345 143354924 + Eya3 protein_coding processed_transcript MGP_CBAJ_T0014556.1 MGP_CBAJ_G0012668.1 mouse_genomes_project 4 133520463 133521011 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004368.1 MGP_CBAJ_G0003804.1 mouse_genomes_project 4 47712402 47761232 - Gm12446 antisense antisense MGP_CBAJ_T0004369.1 MGP_CBAJ_G0003804.1 mouse_genomes_project 4 47746396 47763316 - Gm12446 antisense antisense MGP_CBAJ_T0014268.1 MGP_CBAJ_G0012380.1 mouse_genomes_project 4 24137408 24137735 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068661.1 MGP_CBAJ_G0028722.1 mouse_genomes_project 4 154384209 154416885 - MGP_CBAJ_P0068661 Ctrc protein_coding nonsense_mediated_decay MGP_CBAJ_T0068663.1 MGP_CBAJ_G0028722.1 mouse_genomes_project 4 154408948 154416979 - Ctrc protein_coding processed_transcript MGP_CBAJ_T0068664.1 MGP_CBAJ_G0028722.1 mouse_genomes_project 4 154408948 154416905 - MGP_CBAJ_P0068664 Ctrc protein_coding protein_coding MGP_CBAJ_T0068665.1 MGP_CBAJ_G0028722.1 mouse_genomes_project 4 154408953 154416981 - MGP_CBAJ_P0068665 Ctrc protein_coding protein_coding MGP_CBAJ_T0068666.1 MGP_CBAJ_G0028722.1 mouse_genomes_project 4 154415460 154415854 - Ctrc protein_coding processed_transcript MGP_CBAJ_T0014598.1 MGP_CBAJ_G0012710.1 mouse_genomes_project 4 154560528 154561093 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0065508.1 MGP_CBAJ_G0028006.1 mouse_genomes_project 4 62834525 62947590 + MGP_CBAJ_P0065508 Snx30 protein_coding protein_coding MGP_CBAJ_T0065509.1 MGP_CBAJ_G0028006.1 mouse_genomes_project 4 62834565 62862798 + Snx30 protein_coding processed_transcript MGP_CBAJ_T0065510.1 MGP_CBAJ_G0028006.1 mouse_genomes_project 4 62927529 62943377 + Snx30 protein_coding processed_transcript MGP_CBAJ_T0065511.1 MGP_CBAJ_G0028006.1 mouse_genomes_project 4 62927615 62937401 + Snx30 protein_coding processed_transcript MGP_CBAJ_T0068247.1 MGP_CBAJ_G0028620.1 mouse_genomes_project 4 147361007 147381406 - MGP_CBAJ_P0068247 Tceb3 protein_coding protein_coding MGP_CBAJ_T0099317.1 MGP_CBAJ_G0037572.1 mouse_genomes_project 4 153236197 153236313 + Gm26226 snRNA snRNA MGP_CBAJ_T0101881.1 MGP_CBAJ_G0039912.1 mouse_genomes_project 4 209429 235985 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0067031.1 MGP_CBAJ_G0028350.1 mouse_genomes_project 4 128014912 128015854 - MGP_CBAJ_P0067031 Olfr1328 protein_coding protein_coding MGP_CBAJ_T0065891.1 MGP_CBAJ_G0028105.1 mouse_genomes_project 4 95518752 95523498 - MGP_CBAJ_P0065891 Cdkn2b protein_coding protein_coding MGP_CBAJ_T0068459.1 MGP_CBAJ_G0028674.1 mouse_genomes_project 4 151292244 151384257 + MGP_CBAJ_P0068459 Capzb protein_coding protein_coding MGP_CBAJ_T0068460.1 MGP_CBAJ_G0028674.1 mouse_genomes_project 4 151292246 151395928 + MGP_CBAJ_P0068460 Capzb protein_coding protein_coding MGP_CBAJ_T0068461.1 MGP_CBAJ_G0028674.1 mouse_genomes_project 4 151292261 151338286 + Capzb protein_coding retained_intron MGP_CBAJ_T0068462.1 MGP_CBAJ_G0028674.1 mouse_genomes_project 4 151292291 151395984 + Capzb protein_coding processed_transcript MGP_CBAJ_T0068463.1 MGP_CBAJ_G0028674.1 mouse_genomes_project 4 151292348 151395259 + MGP_CBAJ_P0068463 Capzb protein_coding protein_coding MGP_CBAJ_T0068464.1 MGP_CBAJ_G0028674.1 mouse_genomes_project 4 151293318 151395609 + MGP_CBAJ_P0068464 Capzb protein_coding protein_coding MGP_CBAJ_T0068465.1 MGP_CBAJ_G0028674.1 mouse_genomes_project 4 151293433 151338546 + Capzb protein_coding retained_intron MGP_CBAJ_T0068466.1 MGP_CBAJ_G0028674.1 mouse_genomes_project 4 151298599 151363650 + MGP_CBAJ_P0068466 Capzb protein_coding protein_coding MGP_CBAJ_T0068467.1 MGP_CBAJ_G0028674.1 mouse_genomes_project 4 151326141 151391260 + MGP_CBAJ_P0068467 Capzb protein_coding protein_coding MGP_CBAJ_T0068468.1 MGP_CBAJ_G0028674.1 mouse_genomes_project 4 151393115 151393985 + Capzb protein_coding processed_transcript MGP_CBAJ_T0100577.1 MGP_CBAJ_G0038832.1 mouse_genomes_project 4 132826148 132826279 + Gm22154 snoRNA snoRNA MGP_CBAJ_T0069022.1 MGP_CBAJ_G0028822.1 mouse_genomes_project 4 165267298 165290872 + MGP_CBAJ_P0069022 Tnfrsf9 protein_coding protein_coding MGP_CBAJ_T0069024.1 MGP_CBAJ_G0028822.1 mouse_genomes_project 4 165272897 165302445 + MGP_CBAJ_P0069024 Tnfrsf9 protein_coding protein_coding MGP_CBAJ_T0069025.1 MGP_CBAJ_G0028822.1 mouse_genomes_project 4 165272932 165302445 + MGP_CBAJ_P0069025 Tnfrsf9 protein_coding protein_coding MGP_CBAJ_T0069026.1 MGP_CBAJ_G0028822.1 mouse_genomes_project 4 165278039 165301592 + MGP_CBAJ_P0069026 Tnfrsf9 protein_coding protein_coding MGP_CBAJ_T0069027.1 MGP_CBAJ_G0028822.1 mouse_genomes_project 4 165284379 165290863 + MGP_CBAJ_P0069027 Tnfrsf9 protein_coding protein_coding MGP_CBAJ_T0069028.1 MGP_CBAJ_G0028822.1 mouse_genomes_project 4 165284460 165286409 + Tnfrsf9 protein_coding processed_transcript MGP_CBAJ_T0069029.1 MGP_CBAJ_G0028822.1 mouse_genomes_project 4 165284460 165302445 + MGP_CBAJ_P0069029 Tnfrsf9 protein_coding protein_coding MGP_CBAJ_T0069030.1 MGP_CBAJ_G0028822.1 mouse_genomes_project 4 165286136 165301437 + MGP_CBAJ_P0069030 Tnfrsf9 protein_coding protein_coding MGP_CBAJ_T0069031.1 MGP_CBAJ_G0028822.1 mouse_genomes_project 4 165286257 165292017 + MGP_CBAJ_P0069031 Tnfrsf9 protein_coding protein_coding MGP_CBAJ_T0004455.1 MGP_CBAJ_G0003869.1 mouse_genomes_project 4 139038133 139046499 + antisense antisense MGP_CBAJ_T0065886.1 MGP_CBAJ_G0028102.1 mouse_genomes_project 4 95017245 95017909 - MGP_CBAJ_P0065886 Ifne protein_coding protein_coding MGP_CBAJ_T0014517.1 MGP_CBAJ_G0012629.1 mouse_genomes_project 4 123988305 123988782 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0064365.1 MGP_CBAJ_G0027742.1 mouse_genomes_project 4 12548765 12757233 - MGP_CBAJ_P0064365 Necab1 protein_coding protein_coding MGP_CBAJ_T0064366.1 MGP_CBAJ_G0027742.1 mouse_genomes_project 4 12551449 12757896 - MGP_CBAJ_P0064366 Necab1 protein_coding protein_coding MGP_CBAJ_T0064367.1 MGP_CBAJ_G0027742.1 mouse_genomes_project 4 12716474 12757063 - Necab1 protein_coding processed_transcript MGP_CBAJ_T0064873.1 MGP_CBAJ_G0027864.1 mouse_genomes_project 4 43989157 44004801 - MGP_CBAJ_P0064873 Fam214b protein_coding protein_coding MGP_CBAJ_T0064874.1 MGP_CBAJ_G0027864.1 mouse_genomes_project 4 43989157 43997870 - MGP_CBAJ_P0064874 Fam214b protein_coding protein_coding MGP_CBAJ_T0064875.1 MGP_CBAJ_G0027864.1 mouse_genomes_project 4 43989159 44005196 - MGP_CBAJ_P0064875 Fam214b protein_coding protein_coding MGP_CBAJ_T0064876.1 MGP_CBAJ_G0027864.1 mouse_genomes_project 4 43989159 44004773 - MGP_CBAJ_P0064876 Fam214b protein_coding protein_coding MGP_CBAJ_T0064877.1 MGP_CBAJ_G0027864.1 mouse_genomes_project 4 43989159 43997873 - MGP_CBAJ_P0064877 Fam214b protein_coding protein_coding MGP_CBAJ_T0064878.1 MGP_CBAJ_G0027864.1 mouse_genomes_project 4 43989159 44005196 - MGP_CBAJ_P0064878 Fam214b protein_coding nonsense_mediated_decay MGP_CBAJ_T0064879.1 MGP_CBAJ_G0027864.1 mouse_genomes_project 4 43993056 43997877 - MGP_CBAJ_P0064879 Fam214b protein_coding protein_coding MGP_CBAJ_T0064880.1 MGP_CBAJ_G0027864.1 mouse_genomes_project 4 43993337 43994904 - MGP_CBAJ_P0064880 Fam214b protein_coding protein_coding MGP_CBAJ_T0064881.1 MGP_CBAJ_G0027864.1 mouse_genomes_project 4 43993440 43996913 - MGP_CBAJ_P0064881 Fam214b protein_coding protein_coding MGP_CBAJ_T0064882.1 MGP_CBAJ_G0027864.1 mouse_genomes_project 4 43993714 44004735 - Fam214b protein_coding processed_transcript MGP_CBAJ_T0007916.1 MGP_CBAJ_G0006453.1 mouse_genomes_project 4 154443242 154444636 + Gm29367 lincRNA lincRNA MGP_CBAJ_T0007906.1 MGP_CBAJ_G0006444.1 mouse_genomes_project 4 152074496 152091473 - 4933427I22Rik lincRNA lincRNA MGP_CBAJ_T0007907.1 MGP_CBAJ_G0006444.1 mouse_genomes_project 4 152075068 152081325 - 4933427I22Rik lincRNA lincRNA MGP_CBAJ_T0065119.1 MGP_CBAJ_G0027903.1 mouse_genomes_project 4 46217051 46241498 - MGP_CBAJ_P0065119 Zbtb5 protein_coding protein_coding MGP_CBAJ_T0065120.1 MGP_CBAJ_G0027903.1 mouse_genomes_project 4 46217054 46241516 - MGP_CBAJ_P0065120 Zbtb5 protein_coding protein_coding MGP_CBAJ_T0065121.1 MGP_CBAJ_G0027903.1 mouse_genomes_project 4 46220835 46241249 - MGP_CBAJ_P0065121 Zbtb5 protein_coding protein_coding MGP_CBAJ_T0014447.1 MGP_CBAJ_G0012559.1 mouse_genomes_project 4 97174695 97175190 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100558.1 MGP_CBAJ_G0038813.1 mouse_genomes_project 4 95380600 95380740 - Gm26490 snoRNA snoRNA MGP_CBAJ_T0099252.1 MGP_CBAJ_G0037507.1 mouse_genomes_project 4 40572822 40572884 - Gm26087 snRNA snRNA MGP_CBAJ_T0068108.1 MGP_CBAJ_G0028589.1 mouse_genomes_project 4 145496117 145502912 + MGP_CBAJ_P0068108 Stmn1 protein_coding protein_coding MGP_CBAJ_T0068109.1 MGP_CBAJ_G0028589.1 mouse_genomes_project 4 145496196 145498489 + Stmn1 protein_coding processed_transcript MGP_CBAJ_T0068110.1 MGP_CBAJ_G0028589.1 mouse_genomes_project 4 145496203 145500939 + MGP_CBAJ_P0068110 Stmn1 protein_coding protein_coding MGP_CBAJ_T0068111.1 MGP_CBAJ_G0028589.1 mouse_genomes_project 4 145496206 145502734 + MGP_CBAJ_P0068111 Stmn1 protein_coding protein_coding MGP_CBAJ_T0068112.1 MGP_CBAJ_G0028589.1 mouse_genomes_project 4 145497547 145501524 + MGP_CBAJ_P0068112 Stmn1 protein_coding protein_coding MGP_CBAJ_T0099263.1 MGP_CBAJ_G0037518.1 mouse_genomes_project 4 60704178 60704282 - Gm26138 snRNA snRNA MGP_CBAJ_T0068577.1 MGP_CBAJ_G0028700.1 mouse_genomes_project 4 153473296 153505335 - Szrd1 protein_coding processed_transcript MGP_CBAJ_T0068578.1 MGP_CBAJ_G0028700.1 mouse_genomes_project 4 153473296 153505335 - Szrd1 protein_coding processed_transcript MGP_CBAJ_T0068579.1 MGP_CBAJ_G0028700.1 mouse_genomes_project 4 153473296 153505326 - MGP_CBAJ_P0068579 Szrd1 protein_coding protein_coding MGP_CBAJ_T0068580.1 MGP_CBAJ_G0028700.1 mouse_genomes_project 4 153473296 153505287 - MGP_CBAJ_P0068580 Szrd1 protein_coding protein_coding MGP_CBAJ_T0068581.1 MGP_CBAJ_G0028700.1 mouse_genomes_project 4 153476862 153505300 - Szrd1 protein_coding processed_transcript MGP_CBAJ_T0007870.1 MGP_CBAJ_G0006419.1 mouse_genomes_project 4 141105154 141113347 - lincRNA lincRNA MGP_CBAJ_T0014463.1 MGP_CBAJ_G0012575.1 mouse_genomes_project 4 105121040 105121496 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065210.1 MGP_CBAJ_G0027925.1 mouse_genomes_project 4 47945369 47959709 + MGP_CBAJ_P0065210 Nans protein_coding protein_coding MGP_CBAJ_T0065211.1 MGP_CBAJ_G0027925.1 mouse_genomes_project 4 47945440 47951258 + Nans protein_coding processed_transcript MGP_CBAJ_T0065212.1 MGP_CBAJ_G0027925.1 mouse_genomes_project 4 47945495 47955204 + Nans protein_coding processed_transcript MGP_CBAJ_T0065213.1 MGP_CBAJ_G0027925.1 mouse_genomes_project 4 47946106 47956867 + Nans protein_coding processed_transcript MGP_CBAJ_T0069452.1 MGP_CBAJ_G0028900.1 mouse_genomes_project 4 170931764 170955458 + Cpsf3l protein_coding processed_transcript MGP_CBAJ_T0069453.1 MGP_CBAJ_G0028900.1 mouse_genomes_project 4 170931764 170956072 + MGP_CBAJ_P0069453 Cpsf3l protein_coding protein_coding MGP_CBAJ_T0069454.1 MGP_CBAJ_G0028900.1 mouse_genomes_project 4 170931764 170955444 + MGP_CBAJ_P0069454 Cpsf3l protein_coding protein_coding MGP_CBAJ_T0069455.1 MGP_CBAJ_G0028900.1 mouse_genomes_project 4 170931785 170936758 + Cpsf3l protein_coding retained_intron MGP_CBAJ_T0069456.1 MGP_CBAJ_G0028900.1 mouse_genomes_project 4 170931833 170953684 + MGP_CBAJ_P0069456 Cpsf3l protein_coding nonsense_mediated_decay MGP_CBAJ_T0069457.1 MGP_CBAJ_G0028900.1 mouse_genomes_project 4 170954543 170955246 + Cpsf3l protein_coding retained_intron MGP_CBAJ_T0069459.1 MGP_CBAJ_G0028900.1 mouse_genomes_project 4 170954881 170955492 + Cpsf3l protein_coding retained_intron MGP_CBAJ_T0065889.1 MGP_CBAJ_G0028104.1 mouse_genomes_project 4 95479487 95491834 - MGP_CBAJ_P0065889 Cdkn2a protein_coding protein_coding MGP_CBAJ_T0065890.1 MGP_CBAJ_G0028104.1 mouse_genomes_project 4 95479557 95507053 - MGP_CBAJ_P0065890 Cdkn2a protein_coding protein_coding MGP_CBAJ_T0004386.1 MGP_CBAJ_G0003821.1 mouse_genomes_project 4 94073678 94075179 + Gm12631 antisense antisense MGP_CBAJ_T0010511.1 MGP_CBAJ_G0008649.1 mouse_genomes_project 4 145623348 145623477 - Mir6403 miRNA miRNA MGP_CBAJ_T0068556.1 MGP_CBAJ_G0028697.1 mouse_genomes_project 4 153356398 153369004 - Crocc protein_coding retained_intron MGP_CBAJ_T0068557.1 MGP_CBAJ_G0028697.1 mouse_genomes_project 4 153356398 153361953 - Crocc protein_coding retained_intron MGP_CBAJ_T0068558.1 MGP_CBAJ_G0028697.1 mouse_genomes_project 4 153356740 153358629 - Crocc protein_coding retained_intron MGP_CBAJ_T0068559.1 MGP_CBAJ_G0028697.1 mouse_genomes_project 4 153356807 153393462 - MGP_CBAJ_P0068559 Crocc protein_coding protein_coding MGP_CBAJ_T0068560.1 MGP_CBAJ_G0028697.1 mouse_genomes_project 4 153359553 153362345 - Crocc protein_coding retained_intron MGP_CBAJ_T0068561.1 MGP_CBAJ_G0028697.1 mouse_genomes_project 4 153361366 153362375 - Crocc protein_coding retained_intron MGP_CBAJ_T0068562.1 MGP_CBAJ_G0028697.1 mouse_genomes_project 4 153384417 153403328 - MGP_CBAJ_P0068562 Crocc protein_coding protein_coding MGP_CBAJ_T0068563.1 MGP_CBAJ_G0028697.1 mouse_genomes_project 4 153385711 153400845 - Crocc protein_coding retained_intron MGP_CBAJ_T0004407.1 MGP_CBAJ_G0003832.1 mouse_genomes_project 4 114638356 114641606 - 2700068H02Rik antisense antisense MGP_CBAJ_T0001374.1 MGP_CBAJ_G0001300.1 mouse_genomes_project 4 49436870 49555811 - TEC TEC MGP_CBAJ_T0067741.1 MGP_CBAJ_G0028511.1 mouse_genomes_project 4 140766305 140773174 + MGP_CBAJ_P0067741 Fabp3 protein_coding protein_coding MGP_CBAJ_T0066686.1 MGP_CBAJ_G0028274.1 mouse_genomes_project 4 124546513 124550065 + MGP_CBAJ_P0066686 Kncn protein_coding protein_coding MGP_CBAJ_T0066687.1 MGP_CBAJ_G0028274.1 mouse_genomes_project 4 124547980 124551627 + Kncn protein_coding processed_transcript MGP_CBAJ_T0099294.1 MGP_CBAJ_G0037549.1 mouse_genomes_project 4 126083268 126083384 + Gm23143 snRNA snRNA MGP_CBAJ_T0004469.1 MGP_CBAJ_G0003880.1 mouse_genomes_project 4 146545700 146547876 + Gm12984 antisense antisense MGP_CBAJ_T0067954.1 MGP_CBAJ_G0028554.1 mouse_genomes_project 4 144056770 144114501 - MGP_CBAJ_P0067954 Wdtc1 protein_coding protein_coding MGP_CBAJ_T0067955.1 MGP_CBAJ_G0028554.1 mouse_genomes_project 4 144072842 144131201 - Wdtc1 protein_coding processed_transcript MGP_CBAJ_T0067956.1 MGP_CBAJ_G0028554.1 mouse_genomes_project 4 144077115 144090999 - Wdtc1 protein_coding processed_transcript MGP_CBAJ_T0067957.1 MGP_CBAJ_G0028554.1 mouse_genomes_project 4 144077740 144131780 - Wdtc1 protein_coding processed_transcript MGP_CBAJ_T0014237.1 MGP_CBAJ_G0012349.1 mouse_genomes_project 4 14161323 14162543 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014576.1 MGP_CBAJ_G0012688.1 mouse_genomes_project 4 144045092 144045547 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0068677.1 MGP_CBAJ_G0028725.1 mouse_genomes_project 4 154630972 154705142 - MGP_CBAJ_P0068677 Tmem51 protein_coding protein_coding MGP_CBAJ_T0068699.1 MGP_CBAJ_G0028732.1 mouse_genomes_project 4 156258290 156281259 - MGP_CBAJ_P0068699 Oog4 protein_coding protein_coding MGP_CBAJ_T0068700.1 MGP_CBAJ_G0028732.1 mouse_genomes_project 4 156258291 156281239 - MGP_CBAJ_P0068700 Oog4 protein_coding protein_coding MGP_CBAJ_T0067186.1 MGP_CBAJ_G0028390.1 mouse_genomes_project 4 132142603 132161370 + MGP_CBAJ_P0067186 9530002B09Rik protein_coding protein_coding MGP_CBAJ_T0014200.1 MGP_CBAJ_G0012312.1 mouse_genomes_project 4 2507745 2508717 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064795.1 MGP_CBAJ_G0027847.1 mouse_genomes_project 4 42604249 42604997 - MGP_CBAJ_P0064795 protein_coding protein_coding MGP_CBAJ_T0064797.1 MGP_CBAJ_G0027847.1 mouse_genomes_project 4 42604253 42608373 - MGP_CBAJ_P0064797 protein_coding protein_coding MGP_CBAJ_T0064810.1 MGP_CBAJ_G0027847.1 mouse_genomes_project 4 42607961 42608930 - protein_coding processed_transcript MGP_CBAJ_T0007876.1 MGP_CBAJ_G0006424.1 mouse_genomes_project 4 142094595 142119902 - Gm12962 lincRNA lincRNA MGP_CBAJ_T0007877.1 MGP_CBAJ_G0006424.1 mouse_genomes_project 4 142094923 142124787 - Gm12962 lincRNA lincRNA MGP_CBAJ_T0064318.1 MGP_CBAJ_G0027729.1 mouse_genomes_project 4 8907005 8914933 + MGP_CBAJ_P0064318 Fsbp protein_coding protein_coding MGP_CBAJ_T0004419.1 MGP_CBAJ_G0003840.1 mouse_genomes_project 4 117886632 117887051 - Ttc39aos1 antisense antisense MGP_CBAJ_T0004420.1 MGP_CBAJ_G0003840.1 mouse_genomes_project 4 117886647 117888994 - Ttc39aos1 antisense antisense MGP_CBAJ_T0067423.1 MGP_CBAJ_G0028447.1 mouse_genomes_project 4 136495586 136529641 + MGP_CBAJ_P0067423 Psmb2 protein_coding protein_coding MGP_CBAJ_T0067424.1 MGP_CBAJ_G0028447.1 mouse_genomes_project 4 136495635 136505237 + Psmb2 protein_coding processed_transcript MGP_CBAJ_T0067425.1 MGP_CBAJ_G0028447.1 mouse_genomes_project 4 136495660 136527690 + Psmb2 protein_coding processed_transcript MGP_CBAJ_T0067485.1 MGP_CBAJ_G0028464.1 mouse_genomes_project 4 138286229 138286975 - MGP_CBAJ_P0067485 Hmgb4 protein_coding protein_coding MGP_CBAJ_T0065236.1 MGP_CBAJ_G0027932.1 mouse_genomes_project 4 48755150 48873283 + MGP_CBAJ_P0065236 Col15a1 protein_coding protein_coding MGP_CBAJ_T0065237.1 MGP_CBAJ_G0027932.1 mouse_genomes_project 4 48755150 48873287 + MGP_CBAJ_P0065237 Col15a1 protein_coding protein_coding MGP_CBAJ_T0065238.1 MGP_CBAJ_G0027932.1 mouse_genomes_project 4 48783423 48795675 + Col15a1 protein_coding processed_transcript MGP_CBAJ_T0065239.1 MGP_CBAJ_G0027932.1 mouse_genomes_project 4 48808702 48812178 + Col15a1 protein_coding processed_transcript MGP_CBAJ_T0065240.1 MGP_CBAJ_G0027932.1 mouse_genomes_project 4 48809023 48812367 + Col15a1 protein_coding processed_transcript MGP_CBAJ_T0065241.1 MGP_CBAJ_G0027932.1 mouse_genomes_project 4 48843268 48848434 + MGP_CBAJ_P0065241 Col15a1 protein_coding protein_coding MGP_CBAJ_T0065242.1 MGP_CBAJ_G0027932.1 mouse_genomes_project 4 48843280 48873287 + MGP_CBAJ_P0065242 Col15a1 protein_coding protein_coding MGP_CBAJ_T0065243.1 MGP_CBAJ_G0027932.1 mouse_genomes_project 4 48843498 48857641 + MGP_CBAJ_P0065243 Col15a1 protein_coding protein_coding MGP_CBAJ_T0065244.1 MGP_CBAJ_G0027932.1 mouse_genomes_project 4 48862090 48873282 + MGP_CBAJ_P0065244 Col15a1 protein_coding protein_coding MGP_CBAJ_T0067020.1 MGP_CBAJ_G0028339.1 mouse_genomes_project 4 127732363 127733338 - MGP_CBAJ_P0067020 Olfr1342 protein_coding protein_coding MGP_CBAJ_T0007863.1 MGP_CBAJ_G0006416.1 mouse_genomes_project 4 139469454 139480845 + Gm26722 lincRNA lincRNA MGP_CBAJ_T0064747.1 MGP_CBAJ_G0027839.1 mouse_genomes_project 4 42536250 42537752 - MGP_CBAJ_P0064747 Rpp25l protein_coding protein_coding MGP_CBAJ_T0014621.1 MGP_CBAJ_G0012733.1 mouse_genomes_project 4 167314668 167314924 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004389.1 MGP_CBAJ_G0003823.1 mouse_genomes_project 4 101669405 101734471 + Gm12694 antisense antisense MGP_CBAJ_T0017803.1 MGP_CBAJ_G0015296.1 mouse_genomes_project 4 95279037 95311830 - Gm12602 processed_transcript processed_transcript MGP_CBAJ_T0017804.1 MGP_CBAJ_G0015296.1 mouse_genomes_project 4 95304479 95311785 - Gm12602 processed_transcript processed_transcript MGP_CBAJ_T0007805.1 MGP_CBAJ_G0006376.1 mouse_genomes_project 4 108812885 108867385 + 0610043K17Rik lincRNA lincRNA MGP_CBAJ_T0007807.1 MGP_CBAJ_G0006376.1 mouse_genomes_project 4 108825696 108853080 + 0610043K17Rik lincRNA lincRNA MGP_CBAJ_T0017775.1 MGP_CBAJ_G0015277.1 mouse_genomes_project 4 13920924 14032017 + A530072M11Rik processed_transcript processed_transcript MGP_CBAJ_T0067675.1 MGP_CBAJ_G0028499.1 mouse_genomes_project 4 139984998 140012670 - MGP_CBAJ_P0067675 Tmem39b protein_coding nonsense_mediated_decay MGP_CBAJ_T0067676.1 MGP_CBAJ_G0028499.1 mouse_genomes_project 4 139984998 140012712 - MGP_CBAJ_P0067676 Tmem39b protein_coding protein_coding MGP_CBAJ_T0067677.1 MGP_CBAJ_G0028499.1 mouse_genomes_project 4 139985242 139987576 - Tmem39b protein_coding retained_intron MGP_CBAJ_T0067678.1 MGP_CBAJ_G0028499.1 mouse_genomes_project 4 140003575 140012494 - MGP_CBAJ_P0067678 Tmem39b protein_coding protein_coding MGP_CBAJ_T0067679.1 MGP_CBAJ_G0028499.1 mouse_genomes_project 4 140003651 140012618 - MGP_CBAJ_P0067679 Tmem39b protein_coding nonsense_mediated_decay MGP_CBAJ_T0100518.1 MGP_CBAJ_G0038773.1 mouse_genomes_project 4 20823539 20823672 + Gm24607 snoRNA snoRNA MGP_CBAJ_T0067132.1 MGP_CBAJ_G0028373.1 mouse_genomes_project 4 129659729 129725469 + Scmh1 protein_coding processed_transcript MGP_CBAJ_T0067133.1 MGP_CBAJ_G0028373.1 mouse_genomes_project 4 129659755 129814409 + MGP_CBAJ_P0067133 Scmh1 protein_coding protein_coding MGP_CBAJ_T0067134.1 MGP_CBAJ_G0028373.1 mouse_genomes_project 4 129659814 129736933 + Scmh1 protein_coding processed_transcript MGP_CBAJ_T0067135.1 MGP_CBAJ_G0028373.1 mouse_genomes_project 4 129659829 129719692 + Scmh1 protein_coding processed_transcript MGP_CBAJ_T0067136.1 MGP_CBAJ_G0028373.1 mouse_genomes_project 4 129659876 129736898 + MGP_CBAJ_P0067136 Scmh1 protein_coding protein_coding MGP_CBAJ_T0067137.1 MGP_CBAJ_G0028373.1 mouse_genomes_project 4 129718106 129814409 + MGP_CBAJ_P0067137 Scmh1 protein_coding protein_coding MGP_CBAJ_T0067138.1 MGP_CBAJ_G0028373.1 mouse_genomes_project 4 129724196 129814387 + MGP_CBAJ_P0067138 Scmh1 protein_coding protein_coding MGP_CBAJ_T0067139.1 MGP_CBAJ_G0028373.1 mouse_genomes_project 4 129735893 129813484 + MGP_CBAJ_P0067139 Scmh1 protein_coding protein_coding MGP_CBAJ_T0067140.1 MGP_CBAJ_G0028373.1 mouse_genomes_project 4 129783134 129814409 + Scmh1 protein_coding processed_transcript MGP_CBAJ_T0067141.1 MGP_CBAJ_G0028373.1 mouse_genomes_project 4 129784663 129807041 + MGP_CBAJ_P0067141 Scmh1 protein_coding protein_coding MGP_CBAJ_T0067142.1 MGP_CBAJ_G0028373.1 mouse_genomes_project 4 129802109 129814409 + Scmh1 protein_coding processed_transcript MGP_CBAJ_T0067143.1 MGP_CBAJ_G0028373.1 mouse_genomes_project 4 129802162 129814026 + Scmh1 protein_coding processed_transcript MGP_CBAJ_T0067144.1 MGP_CBAJ_G0028373.1 mouse_genomes_project 4 129812053 129813445 + Scmh1 protein_coding processed_transcript MGP_CBAJ_T0067145.1 MGP_CBAJ_G0028373.1 mouse_genomes_project 4 129813379 129814411 + Scmh1 protein_coding processed_transcript MGP_CBAJ_T0066764.1 MGP_CBAJ_G0028290.1 mouse_genomes_project 4 125305874 125349213 + MGP_CBAJ_P0066764 Gpbp1l1 protein_coding unknown_likely_coding MGP_CBAJ_T0066765.1 MGP_CBAJ_G0028290.1 mouse_genomes_project 4 125331867 125337086 + Gpbp1l1 protein_coding processed_transcript MGP_CBAJ_T0066766.1 MGP_CBAJ_G0028290.1 mouse_genomes_project 4 125336996 125344438 + Gpbp1l1 protein_coding processed_transcript MGP_CBAJ_T0066212.1 MGP_CBAJ_G0028179.1 mouse_genomes_project 4 112940600 113019837 - MGP_CBAJ_P0066212 Prkaa2 protein_coding protein_coding MGP_CBAJ_T0001389.1 MGP_CBAJ_G0001314.1 mouse_genomes_project 4 153631461 153632736 - TEC TEC MGP_CBAJ_T0001390.1 MGP_CBAJ_G0001314.1 mouse_genomes_project 4 153631467 153632736 - TEC TEC MGP_CBAJ_T0068021.1 MGP_CBAJ_G0028569.1 mouse_genomes_project 4 144925823 144947883 - MGP_CBAJ_P0068021 Lin28a protein_coding protein_coding MGP_CBAJ_T0068022.1 MGP_CBAJ_G0028569.1 mouse_genomes_project 4 144930874 144938687 - MGP_CBAJ_P0068022 Lin28a protein_coding protein_coding MGP_CBAJ_T0068023.1 MGP_CBAJ_G0028569.1 mouse_genomes_project 4 144930880 144934395 - MGP_CBAJ_P0068023 Lin28a protein_coding protein_coding MGP_CBAJ_T0068024.1 MGP_CBAJ_G0028569.1 mouse_genomes_project 4 144932502 144947424 - MGP_CBAJ_P0068024 Lin28a protein_coding protein_coding MGP_CBAJ_T0064923.1 MGP_CBAJ_G0027868.1 mouse_genomes_project 4 44404008 44406119 - MGP_CBAJ_P0064923 Fam166b protein_coding protein_coding MGP_CBAJ_T0064924.1 MGP_CBAJ_G0027868.1 mouse_genomes_project 4 44404065 44406102 - MGP_CBAJ_P0064924 Fam166b protein_coding protein_coding MGP_CBAJ_T0064925.1 MGP_CBAJ_G0027868.1 mouse_genomes_project 4 44404129 44405012 - MGP_CBAJ_P0064925 Fam166b protein_coding protein_coding MGP_CBAJ_T0064926.1 MGP_CBAJ_G0027868.1 mouse_genomes_project 4 44404129 44406074 - MGP_CBAJ_P0064926 Fam166b protein_coding protein_coding MGP_CBAJ_T0064927.1 MGP_CBAJ_G0027868.1 mouse_genomes_project 4 44404172 44406074 - MGP_CBAJ_P0064927 Fam166b protein_coding protein_coding MGP_CBAJ_T0064928.1 MGP_CBAJ_G0027868.1 mouse_genomes_project 4 44404575 44406074 - MGP_CBAJ_P0064928 Fam166b protein_coding nonsense_mediated_decay MGP_CBAJ_T0068431.1 MGP_CBAJ_G0028664.1 mouse_genomes_project 4 150754834 150765573 - MGP_CBAJ_P0068431 Pla2g2f protein_coding protein_coding MGP_CBAJ_T0067180.1 MGP_CBAJ_G0028386.1 mouse_genomes_project 4 130473293 130476869 - MGP_CBAJ_P0067180 Tmco2 protein_coding protein_coding MGP_CBAJ_T0017806.1 MGP_CBAJ_G0015298.1 mouse_genomes_project 4 95636441 95685566 + Gm12610 processed_transcript processed_transcript MGP_CBAJ_T0004434.1 MGP_CBAJ_G0003852.1 mouse_genomes_project 4 127677806 127681004 - Gm12853 antisense antisense MGP_CBAJ_T0064773.1 MGP_CBAJ_G0027844.1 mouse_genomes_project 4 42594936 42604247 + MGP_CBAJ_P0064773 protein_coding protein_coding MGP_CBAJ_T0064774.1 MGP_CBAJ_G0027844.1 mouse_genomes_project 4 42595194 42604247 + MGP_CBAJ_P0064774 protein_coding protein_coding MGP_CBAJ_T0064775.1 MGP_CBAJ_G0027844.1 mouse_genomes_project 4 42595238 42600899 + protein_coding retained_intron MGP_CBAJ_T0064776.1 MGP_CBAJ_G0027844.1 mouse_genomes_project 4 42595252 42598782 + protein_coding retained_intron MGP_CBAJ_T0064777.1 MGP_CBAJ_G0027844.1 mouse_genomes_project 4 42597081 42604247 + MGP_CBAJ_P0064777 protein_coding protein_coding MGP_CBAJ_T0064778.1 MGP_CBAJ_G0027844.1 mouse_genomes_project 4 42597167 42602833 + protein_coding retained_intron MGP_CBAJ_T0064782.1 MGP_CBAJ_G0027844.1 mouse_genomes_project 4 42602571 42604247 + protein_coding retained_intron MGP_CBAJ_T0064785.1 MGP_CBAJ_G0027844.1 mouse_genomes_project 4 42603220 42604247 + protein_coding retained_intron MGP_CBAJ_T0064160.1 MGP_CBAJ_G0027699.1 mouse_genomes_project 4 335888 340240 - MGP_CBAJ_P0064160 Rps20 protein_coding protein_coding MGP_CBAJ_T0064161.1 MGP_CBAJ_G0027699.1 mouse_genomes_project 4 339038 339808 - Rps20 protein_coding retained_intron MGP_CBAJ_T0064162.1 MGP_CBAJ_G0027699.1 mouse_genomes_project 4 339041 340063 - Rps20 protein_coding retained_intron MGP_CBAJ_T0064518.1 MGP_CBAJ_G0027783.1 mouse_genomes_project 4 32304961 32441552 + MGP_CBAJ_P0064518 Mdn1 protein_coding protein_coding MGP_CBAJ_T0064519.1 MGP_CBAJ_G0027783.1 mouse_genomes_project 4 32304961 32441562 + MGP_CBAJ_P0064519 Mdn1 protein_coding protein_coding MGP_CBAJ_T0064520.1 MGP_CBAJ_G0027783.1 mouse_genomes_project 4 32305025 32312037 + Mdn1 protein_coding processed_transcript MGP_CBAJ_T0064521.1 MGP_CBAJ_G0027783.1 mouse_genomes_project 4 32319414 32327633 + Mdn1 protein_coding processed_transcript MGP_CBAJ_T0064522.1 MGP_CBAJ_G0027783.1 mouse_genomes_project 4 32347838 32348921 + Mdn1 protein_coding processed_transcript MGP_CBAJ_T0064523.1 MGP_CBAJ_G0027783.1 mouse_genomes_project 4 32358441 32441543 + Mdn1 protein_coding processed_transcript MGP_CBAJ_T0064524.1 MGP_CBAJ_G0027783.1 mouse_genomes_project 4 32376699 32385243 + Mdn1 protein_coding processed_transcript MGP_CBAJ_T0064525.1 MGP_CBAJ_G0027783.1 mouse_genomes_project 4 32379662 32382018 + Mdn1 protein_coding processed_transcript MGP_CBAJ_T0064526.1 MGP_CBAJ_G0027783.1 mouse_genomes_project 4 32406324 32420512 + Mdn1 protein_coding processed_transcript MGP_CBAJ_T0064527.1 MGP_CBAJ_G0027783.1 mouse_genomes_project 4 32406324 32407415 + Mdn1 protein_coding processed_transcript MGP_CBAJ_T0064528.1 MGP_CBAJ_G0027783.1 mouse_genomes_project 4 32429444 32431579 + Mdn1 protein_coding processed_transcript MGP_CBAJ_T0014508.1 MGP_CBAJ_G0012620.1 mouse_genomes_project 4 119959088 119960087 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014464.1 MGP_CBAJ_G0012576.1 mouse_genomes_project 4 105220145 105220691 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067019.1 MGP_CBAJ_G0028338.1 mouse_genomes_project 4 127711312 127712260 + MGP_CBAJ_P0067019 Olfr62 protein_coding protein_coding MGP_CBAJ_T0014486.1 MGP_CBAJ_G0012598.1 mouse_genomes_project 4 112875085 112875353 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0068068.1 MGP_CBAJ_G0028578.1 mouse_genomes_project 4 145203894 145214590 - MGP_CBAJ_P0068068 Cnksr1 protein_coding protein_coding MGP_CBAJ_T0068069.1 MGP_CBAJ_G0028578.1 mouse_genomes_project 4 145203902 145214530 - Cnksr1 protein_coding processed_transcript MGP_CBAJ_T0068070.1 MGP_CBAJ_G0028578.1 mouse_genomes_project 4 145205210 145206285 - Cnksr1 protein_coding processed_transcript MGP_CBAJ_T0068071.1 MGP_CBAJ_G0028578.1 mouse_genomes_project 4 145206274 145209022 - Cnksr1 protein_coding processed_transcript MGP_CBAJ_T0068072.1 MGP_CBAJ_G0028578.1 mouse_genomes_project 4 145208333 145211810 - Cnksr1 protein_coding processed_transcript MGP_CBAJ_T0101905.1 MGP_CBAJ_G0039936.1 mouse_genomes_project 4 122484895 122540606 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0067598.1 MGP_CBAJ_G0028487.1 mouse_genomes_project 4 139730424 139731191 + MGP_CBAJ_P0067598 Fam229a protein_coding protein_coding MGP_CBAJ_T0067599.1 MGP_CBAJ_G0028487.1 mouse_genomes_project 4 139730474 139731191 + Fam229a protein_coding retained_intron MGP_CBAJ_T0014252.1 MGP_CBAJ_G0012364.1 mouse_genomes_project 4 19335535 19336596 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014465.1 MGP_CBAJ_G0012577.1 mouse_genomes_project 4 105264485 105264978 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010486.1 MGP_CBAJ_G0008624.1 mouse_genomes_project 4 116367815 116367908 + Mir6397 miRNA miRNA MGP_CBAJ_T0014204.1 MGP_CBAJ_G0012316.1 mouse_genomes_project 4 3304450 3305196 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0065614.1 MGP_CBAJ_G0028037.1 mouse_genomes_project 4 67105232 67106243 - Gm11214 protein_coding translated_processed_pseudogene MGP_CBAJ_T0065615.1 MGP_CBAJ_G0028037.1 mouse_genomes_project 4 67105232 67105784 - MGP_CBAJ_P0065615 Gm11214 protein_coding protein_coding MGP_CBAJ_T0007914.1 MGP_CBAJ_G0006451.1 mouse_genomes_project 4 153684386 153685688 + Gm13056 lincRNA lincRNA MGP_CBAJ_T0014566.1 MGP_CBAJ_G0012678.1 mouse_genomes_project 4 137036015 137036225 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004527.1 MGP_CBAJ_G0003925.1 mouse_genomes_project 4 169770090 169775422 - Gm13112 antisense antisense MGP_CBAJ_T0004528.1 MGP_CBAJ_G0003925.1 mouse_genomes_project 4 169770667 169777945 - Gm13112 antisense antisense MGP_CBAJ_T0068961.1 MGP_CBAJ_G0028809.1 mouse_genomes_project 4 163804838 163827491 - MGP_CBAJ_P0068961 Tmem201 protein_coding protein_coding MGP_CBAJ_T0068962.1 MGP_CBAJ_G0028809.1 mouse_genomes_project 4 163804846 163827491 - MGP_CBAJ_P0068962 Tmem201 protein_coding protein_coding MGP_CBAJ_T0068963.1 MGP_CBAJ_G0028809.1 mouse_genomes_project 4 163814319 163820142 - Tmem201 protein_coding retained_intron MGP_CBAJ_T0068964.1 MGP_CBAJ_G0028809.1 mouse_genomes_project 4 163814319 163827491 - MGP_CBAJ_P0068964 Tmem201 protein_coding protein_coding MGP_CBAJ_T0068965.1 MGP_CBAJ_G0028809.1 mouse_genomes_project 4 163818245 163827445 - Tmem201 protein_coding retained_intron MGP_CBAJ_T0068966.1 MGP_CBAJ_G0028809.1 mouse_genomes_project 4 163820618 163827217 - Tmem201 protein_coding processed_transcript MGP_CBAJ_T0014581.1 MGP_CBAJ_G0012693.1 mouse_genomes_project 4 146528825 146529135 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0066639.1 MGP_CBAJ_G0028261.1 mouse_genomes_project 4 123747593 123782353 + MGP_CBAJ_P0066639 Cyp4a12a protein_coding protein_coding MGP_CBAJ_T0007701.1 MGP_CBAJ_G0006285.1 mouse_genomes_project 4 8598877 8621611 + Gm26663 lincRNA lincRNA MGP_CBAJ_T0007792.1 MGP_CBAJ_G0006364.1 mouse_genomes_project 4 100037003 100281069 - Gm12649 lincRNA lincRNA MGP_CBAJ_T0064565.1 MGP_CBAJ_G0027795.1 mouse_genomes_project 4 33876038 33905262 - MGP_CBAJ_P0064565 Spaca1 protein_coding protein_coding MGP_CBAJ_T0064566.1 MGP_CBAJ_G0027795.1 mouse_genomes_project 4 33876040 33896138 - MGP_CBAJ_P0064566 Spaca1 protein_coding protein_coding MGP_CBAJ_T0064567.1 MGP_CBAJ_G0027795.1 mouse_genomes_project 4 33879477 33905414 - MGP_CBAJ_P0064567 Spaca1 protein_coding protein_coding MGP_CBAJ_T0017801.1 MGP_CBAJ_G0015294.1 mouse_genomes_project 4 78165746 78174825 + Gm11240 processed_transcript processed_transcript MGP_CBAJ_T0014567.1 MGP_CBAJ_G0012679.1 mouse_genomes_project 4 137224815 137225497 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064598.1 MGP_CBAJ_G0027802.1 mouse_genomes_project 4 34691222 34700916 - MGP_CBAJ_P0064598 Smim8 protein_coding protein_coding MGP_CBAJ_T0064599.1 MGP_CBAJ_G0027802.1 mouse_genomes_project 4 34691222 34700931 - MGP_CBAJ_P0064599 Smim8 protein_coding protein_coding MGP_CBAJ_T0064600.1 MGP_CBAJ_G0027802.1 mouse_genomes_project 4 34691222 34701038 - MGP_CBAJ_P0064600 Smim8 protein_coding protein_coding MGP_CBAJ_T0064601.1 MGP_CBAJ_G0027802.1 mouse_genomes_project 4 34691222 34700904 - MGP_CBAJ_P0064601 Smim8 protein_coding protein_coding MGP_CBAJ_T0064602.1 MGP_CBAJ_G0027802.1 mouse_genomes_project 4 34691222 34700837 - MGP_CBAJ_P0064602 Smim8 protein_coding protein_coding MGP_CBAJ_T0064603.1 MGP_CBAJ_G0027802.1 mouse_genomes_project 4 34691233 34700898 - Smim8 protein_coding processed_transcript MGP_CBAJ_T0064604.1 MGP_CBAJ_G0027802.1 mouse_genomes_project 4 34693446 34700922 - Smim8 protein_coding retained_intron MGP_CBAJ_T0064605.1 MGP_CBAJ_G0027802.1 mouse_genomes_project 4 34693804 34700785 - Smim8 protein_coding processed_transcript MGP_CBAJ_T0064422.1 MGP_CBAJ_G0027764.1 mouse_genomes_project 4 20112191 20127362 + Usp45 protein_coding processed_transcript MGP_CBAJ_T0064423.1 MGP_CBAJ_G0027764.1 mouse_genomes_project 4 20121145 20129710 + Usp45 protein_coding retained_intron MGP_CBAJ_T0064424.1 MGP_CBAJ_G0027764.1 mouse_genomes_project 4 20121156 20190777 + MGP_CBAJ_P0064424 Usp45 protein_coding protein_coding MGP_CBAJ_T0064425.1 MGP_CBAJ_G0027764.1 mouse_genomes_project 4 20121156 20190779 + MGP_CBAJ_P0064425 Usp45 protein_coding protein_coding MGP_CBAJ_T0064426.1 MGP_CBAJ_G0027764.1 mouse_genomes_project 4 20121165 20145497 + MGP_CBAJ_P0064426 Usp45 protein_coding protein_coding MGP_CBAJ_T0064427.1 MGP_CBAJ_G0027764.1 mouse_genomes_project 4 20121182 20190779 + MGP_CBAJ_P0064427 Usp45 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064428.1 MGP_CBAJ_G0027764.1 mouse_genomes_project 4 20126622 20190777 + MGP_CBAJ_P0064428 Usp45 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064429.1 MGP_CBAJ_G0027764.1 mouse_genomes_project 4 20129593 20166604 + MGP_CBAJ_P0064429 Usp45 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065185.1 MGP_CBAJ_G0027918.1 mouse_genomes_project 4 47490735 47518470 - MGP_CBAJ_P0065185 Tstd2 protein_coding protein_coding MGP_CBAJ_T0065186.1 MGP_CBAJ_G0027918.1 mouse_genomes_project 4 47491681 47518433 - MGP_CBAJ_P0065186 Tstd2 protein_coding protein_coding MGP_CBAJ_T0065187.1 MGP_CBAJ_G0027918.1 mouse_genomes_project 4 47499358 47518408 - Tstd2 protein_coding retained_intron MGP_CBAJ_T0065188.1 MGP_CBAJ_G0027918.1 mouse_genomes_project 4 47507861 47511926 - Tstd2 protein_coding retained_intron MGP_CBAJ_T0065189.1 MGP_CBAJ_G0027918.1 mouse_genomes_project 4 47511936 47518689 - MGP_CBAJ_P0065189 Tstd2 protein_coding protein_coding MGP_CBAJ_T0065190.1 MGP_CBAJ_G0027918.1 mouse_genomes_project 4 47511999 47518404 - MGP_CBAJ_P0065190 Tstd2 protein_coding protein_coding MGP_CBAJ_T0065191.1 MGP_CBAJ_G0027918.1 mouse_genomes_project 4 47512148 47515778 - MGP_CBAJ_P0065191 Tstd2 protein_coding protein_coding MGP_CBAJ_T0065192.1 MGP_CBAJ_G0027918.1 mouse_genomes_project 4 47515501 47518450 - MGP_CBAJ_P0065192 Tstd2 protein_coding protein_coding MGP_CBAJ_T0007825.1 MGP_CBAJ_G0006388.1 mouse_genomes_project 4 116208270 116215071 + 4930407G08Rik lincRNA lincRNA MGP_CBAJ_T0069151.1 MGP_CBAJ_G0028845.1 mouse_genomes_project 4 166896901 166959218 + MGP_CBAJ_P0069151 Chd5 protein_coding protein_coding MGP_CBAJ_T0069152.1 MGP_CBAJ_G0028845.1 mouse_genomes_project 4 166896901 166959218 + MGP_CBAJ_P0069152 Chd5 protein_coding protein_coding MGP_CBAJ_T0069153.1 MGP_CBAJ_G0028845.1 mouse_genomes_project 4 166897137 166959205 + MGP_CBAJ_P0069153 Chd5 protein_coding protein_coding MGP_CBAJ_T0069154.1 MGP_CBAJ_G0028845.1 mouse_genomes_project 4 166899844 166915525 + Chd5 protein_coding processed_transcript MGP_CBAJ_T0069155.1 MGP_CBAJ_G0028845.1 mouse_genomes_project 4 166941183 166959205 + Chd5 protein_coding processed_transcript MGP_CBAJ_T0064554.1 MGP_CBAJ_G0027792.1 mouse_genomes_project 4 33000917 33004005 - MGP_CBAJ_P0064554 Pnrc1 protein_coding protein_coding MGP_CBAJ_T0064555.1 MGP_CBAJ_G0027792.1 mouse_genomes_project 4 33001498 33003070 - Pnrc1 protein_coding processed_transcript MGP_CBAJ_T0064556.1 MGP_CBAJ_G0027792.1 mouse_genomes_project 4 33001506 33067570 - Pnrc1 protein_coding processed_transcript MGP_CBAJ_T0067210.1 MGP_CBAJ_G0028396.1 mouse_genomes_project 4 132613402 132649347 + MGP_CBAJ_P0067210 Bmp8b protein_coding protein_coding MGP_CBAJ_T0067211.1 MGP_CBAJ_G0028396.1 mouse_genomes_project 4 132636684 132656324 + Bmp8b protein_coding processed_transcript MGP_CBAJ_T0007826.1 MGP_CBAJ_G0006389.1 mouse_genomes_project 4 117031626 117035277 - Gm17354 lincRNA lincRNA MGP_CBAJ_T0014524.1 MGP_CBAJ_G0012636.1 mouse_genomes_project 4 125694832 125698938 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0066292.1 MGP_CBAJ_G0028197.1 mouse_genomes_project 4 115300055 115353534 - MGP_CBAJ_P0066292 Tceanc2 protein_coding protein_coding MGP_CBAJ_T0066293.1 MGP_CBAJ_G0028197.1 mouse_genomes_project 4 115305162 115353353 - MGP_CBAJ_P0066293 Tceanc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066294.1 MGP_CBAJ_G0028197.1 mouse_genomes_project 4 115305217 115353270 - Tceanc2 protein_coding processed_transcript MGP_CBAJ_T0066295.1 MGP_CBAJ_G0028197.1 mouse_genomes_project 4 115305425 115354090 - MGP_CBAJ_P0066295 Tceanc2 protein_coding protein_coding MGP_CBAJ_T0066296.1 MGP_CBAJ_G0028197.1 mouse_genomes_project 4 115305469 115353269 - MGP_CBAJ_P0066296 Tceanc2 protein_coding protein_coding MGP_CBAJ_T0066297.1 MGP_CBAJ_G0028197.1 mouse_genomes_project 4 115305589 115354103 - MGP_CBAJ_P0066297 Tceanc2 protein_coding protein_coding MGP_CBAJ_T0066298.1 MGP_CBAJ_G0028197.1 mouse_genomes_project 4 115334129 115352838 - Tceanc2 protein_coding processed_transcript MGP_CBAJ_T0066299.1 MGP_CBAJ_G0028197.1 mouse_genomes_project 4 115347993 115353195 - Tceanc2 protein_coding processed_transcript MGP_CBAJ_T0066300.1 MGP_CBAJ_G0028197.1 mouse_genomes_project 4 115351602 115352655 - Tceanc2 protein_coding processed_transcript MGP_CBAJ_T0017854.1 MGP_CBAJ_G0015326.1 mouse_genomes_project 4 169550192 169559728 - Gm13110 processed_transcript processed_transcript MGP_CBAJ_T0014449.1 MGP_CBAJ_G0012561.1 mouse_genomes_project 4 97724730 97725291 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101886.1 MGP_CBAJ_G0039917.1 mouse_genomes_project 4 55275627 55276579 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0069466.1 MGP_CBAJ_G0028902.1 mouse_genomes_project 4 170958784 170973551 + MGP_CBAJ_P0069466 Acap3 protein_coding protein_coding MGP_CBAJ_T0069467.1 MGP_CBAJ_G0028902.1 mouse_genomes_project 4 170958837 170973552 + MGP_CBAJ_P0069467 Acap3 protein_coding protein_coding MGP_CBAJ_T0069468.1 MGP_CBAJ_G0028902.1 mouse_genomes_project 4 170958864 170965781 + Acap3 protein_coding processed_transcript MGP_CBAJ_T0069469.1 MGP_CBAJ_G0028902.1 mouse_genomes_project 4 170959234 170965923 + Acap3 protein_coding processed_transcript MGP_CBAJ_T0069470.1 MGP_CBAJ_G0028902.1 mouse_genomes_project 4 170959274 170973552 + Acap3 protein_coding processed_transcript MGP_CBAJ_T0069471.1 MGP_CBAJ_G0028902.1 mouse_genomes_project 4 170967896 170968999 + Acap3 protein_coding retained_intron MGP_CBAJ_T0069472.1 MGP_CBAJ_G0028902.1 mouse_genomes_project 4 170968887 170971406 + Acap3 protein_coding retained_intron MGP_CBAJ_T0069473.1 MGP_CBAJ_G0028902.1 mouse_genomes_project 4 170969549 170971637 + Acap3 protein_coding processed_transcript MGP_CBAJ_T0069474.1 MGP_CBAJ_G0028902.1 mouse_genomes_project 4 170971654 170972213 + Acap3 protein_coding processed_transcript MGP_CBAJ_T0068414.1 MGP_CBAJ_G0028659.1 mouse_genomes_project 4 150362528 150370130 + MGP_CBAJ_P0068414 Mul1 protein_coding protein_coding MGP_CBAJ_T0068415.1 MGP_CBAJ_G0028659.1 mouse_genomes_project 4 150362534 150370127 + MGP_CBAJ_P0068415 Mul1 protein_coding protein_coding MGP_CBAJ_T0068416.1 MGP_CBAJ_G0028659.1 mouse_genomes_project 4 150362580 150366875 + MGP_CBAJ_P0068416 Mul1 protein_coding protein_coding MGP_CBAJ_T0014557.1 MGP_CBAJ_G0012669.1 mouse_genomes_project 4 133548040 133548362 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099314.1 MGP_CBAJ_G0037569.1 mouse_genomes_project 4 148947049 148947145 + Gm25772 snRNA snRNA MGP_CBAJ_T0014574.1 MGP_CBAJ_G0012686.1 mouse_genomes_project 4 143447057 143447342 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067096.1 MGP_CBAJ_G0028363.1 mouse_genomes_project 4 128580462 128584298 - Ppcs protein_coding retained_intron MGP_CBAJ_T0067097.1 MGP_CBAJ_G0028363.1 mouse_genomes_project 4 128580462 128584360 - MGP_CBAJ_P0067097 Ppcs protein_coding protein_coding MGP_CBAJ_T0067098.1 MGP_CBAJ_G0028363.1 mouse_genomes_project 4 128580462 128584316 - MGP_CBAJ_P0067098 Ppcs protein_coding protein_coding MGP_CBAJ_T0065164.1 MGP_CBAJ_G0027913.1 mouse_genomes_project 4 47138581 47163997 - MGP_CBAJ_P0065164 Igfbpl1 protein_coding protein_coding MGP_CBAJ_T0065165.1 MGP_CBAJ_G0027913.1 mouse_genomes_project 4 47144649 47147998 - Igfbpl1 protein_coding processed_transcript MGP_CBAJ_T0017807.1 MGP_CBAJ_G0015299.1 mouse_genomes_project 4 101109437 101129547 - Gm12655 processed_transcript processed_transcript MGP_CBAJ_T0017808.1 MGP_CBAJ_G0015299.1 mouse_genomes_project 4 101110539 101129534 - Gm12655 processed_transcript processed_transcript MGP_CBAJ_T0065834.1 MGP_CBAJ_G0028081.1 mouse_genomes_project 4 92737696 92792715 + MGP_CBAJ_P0065834 Acer2 protein_coding protein_coding MGP_CBAJ_T0065835.1 MGP_CBAJ_G0028081.1 mouse_genomes_project 4 92737714 92803967 + Acer2 protein_coding processed_transcript MGP_CBAJ_T0065836.1 MGP_CBAJ_G0028081.1 mouse_genomes_project 4 92737714 92792715 + MGP_CBAJ_P0065836 Acer2 protein_coding protein_coding MGP_CBAJ_T0065837.1 MGP_CBAJ_G0028081.1 mouse_genomes_project 4 92802191 92806302 + Acer2 protein_coding processed_transcript MGP_CBAJ_T0007716.1 MGP_CBAJ_G0006299.1 mouse_genomes_project 4 23089558 23090073 - Gm27243 lincRNA lincRNA MGP_CBAJ_T0067720.1 MGP_CBAJ_G0028506.1 mouse_genomes_project 4 140547123 140556121 - MGP_CBAJ_P0067720 Hcrtr1 protein_coding protein_coding MGP_CBAJ_T0067721.1 MGP_CBAJ_G0028506.1 mouse_genomes_project 4 140547123 140555510 - MGP_CBAJ_P0067721 Hcrtr1 protein_coding protein_coding MGP_CBAJ_T0067722.1 MGP_CBAJ_G0028506.1 mouse_genomes_project 4 140547123 140556318 - MGP_CBAJ_P0067722 Hcrtr1 protein_coding protein_coding MGP_CBAJ_T0067723.1 MGP_CBAJ_G0028506.1 mouse_genomes_project 4 140547747 140554535 - MGP_CBAJ_P0067723 Hcrtr1 protein_coding protein_coding MGP_CBAJ_T0007734.1 MGP_CBAJ_G0006317.1 mouse_genomes_project 4 46997266 47042836 + Gm829 lincRNA lincRNA MGP_CBAJ_T0007735.1 MGP_CBAJ_G0006317.1 mouse_genomes_project 4 46997266 47012369 + Gm829 lincRNA lincRNA MGP_CBAJ_T0067778.1 MGP_CBAJ_G0028519.1 mouse_genomes_project 4 142220084 142300164 - MGP_CBAJ_P0067778 Ptpru protein_coding protein_coding MGP_CBAJ_T0067779.1 MGP_CBAJ_G0028519.1 mouse_genomes_project 4 142220085 142220549 - Ptpru protein_coding processed_transcript MGP_CBAJ_T0067780.1 MGP_CBAJ_G0028519.1 mouse_genomes_project 4 142221125 142300032 - MGP_CBAJ_P0067780 Ptpru protein_coding unknown_likely_coding MGP_CBAJ_T0067781.1 MGP_CBAJ_G0028519.1 mouse_genomes_project 4 142221125 142300107 - MGP_CBAJ_P0067781 Ptpru protein_coding protein_coding MGP_CBAJ_T0067782.1 MGP_CBAJ_G0028519.1 mouse_genomes_project 4 142223763 142300128 - Ptpru protein_coding processed_transcript MGP_CBAJ_T0067783.1 MGP_CBAJ_G0028519.1 mouse_genomes_project 4 142241403 142283363 - MGP_CBAJ_P0067783 Ptpru protein_coding protein_coding MGP_CBAJ_T0067784.1 MGP_CBAJ_G0028519.1 mouse_genomes_project 4 142246707 142261025 - Ptpru protein_coding processed_transcript MGP_CBAJ_T0067785.1 MGP_CBAJ_G0028519.1 mouse_genomes_project 4 142251756 142256528 - Ptpru protein_coding retained_intron MGP_CBAJ_T0067786.1 MGP_CBAJ_G0028519.1 mouse_genomes_project 4 142257768 142261649 - Ptpru protein_coding retained_intron MGP_CBAJ_T0065747.1 MGP_CBAJ_G0028068.1 mouse_genomes_project 4 88968853 89011348 + MGP_CBAJ_P0065747 Snapc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065748.1 MGP_CBAJ_G0028068.1 mouse_genomes_project 4 88968853 89002799 + MGP_CBAJ_P0065748 Snapc3 protein_coding protein_coding MGP_CBAJ_T0065749.1 MGP_CBAJ_G0028068.1 mouse_genomes_project 4 88968860 88995402 + MGP_CBAJ_P0065749 Snapc3 protein_coding protein_coding MGP_CBAJ_T0065750.1 MGP_CBAJ_G0028068.1 mouse_genomes_project 4 88968873 89003492 + MGP_CBAJ_P0065750 Snapc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065751.1 MGP_CBAJ_G0028068.1 mouse_genomes_project 4 88968873 89019275 + MGP_CBAJ_P0065751 Snapc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065752.1 MGP_CBAJ_G0028068.1 mouse_genomes_project 4 88968878 89019732 + MGP_CBAJ_P0065752 Snapc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065753.1 MGP_CBAJ_G0028068.1 mouse_genomes_project 4 89003264 89019222 + Snapc3 protein_coding processed_transcript MGP_CBAJ_T0065754.1 MGP_CBAJ_G0028068.1 mouse_genomes_project 4 89003412 89018183 + Snapc3 protein_coding processed_transcript MGP_CBAJ_T0065761.1 MGP_CBAJ_G0028068.1 mouse_genomes_project 4 89013477 89019267 + Snapc3 protein_coding retained_intron MGP_CBAJ_T0014565.1 MGP_CBAJ_G0012677.1 mouse_genomes_project 4 136910364 136910584 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101120.1 MGP_CBAJ_G0039316.1 mouse_genomes_project 4 92692953 92706672 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0067273.1 MGP_CBAJ_G0028410.1 mouse_genomes_project 4 134274949 134275822 - MGP_CBAJ_P0067273 3100002H09Rik protein_coding protein_coding MGP_CBAJ_T0004454.1 MGP_CBAJ_G0003868.1 mouse_genomes_project 4 138287061 138289012 + Hmgb4os antisense antisense MGP_CBAJ_T0014324.1 MGP_CBAJ_G0012436.1 mouse_genomes_project 4 40731471 40731889 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0066251.1 MGP_CBAJ_G0028192.1 mouse_genomes_project 4 114850632 114926098 - MGP_CBAJ_P0066251 Acot11 protein_coding protein_coding MGP_CBAJ_T0066252.1 MGP_CBAJ_G0028192.1 mouse_genomes_project 4 114853335 114931254 - MGP_CBAJ_P0066252 Acot11 protein_coding protein_coding MGP_CBAJ_T0066253.1 MGP_CBAJ_G0028192.1 mouse_genomes_project 4 114853491 114880934 - MGP_CBAJ_P0066253 Acot11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066254.1 MGP_CBAJ_G0028192.1 mouse_genomes_project 4 114860327 114862580 - Acot11 protein_coding processed_transcript MGP_CBAJ_T0066255.1 MGP_CBAJ_G0028192.1 mouse_genomes_project 4 114871754 114926095 - MGP_CBAJ_P0066255 Acot11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066256.1 MGP_CBAJ_G0028192.1 mouse_genomes_project 4 114873164 114926042 - MGP_CBAJ_P0066256 Acot11 protein_coding protein_coding MGP_CBAJ_T0066257.1 MGP_CBAJ_G0028192.1 mouse_genomes_project 4 114873207 114926501 - MGP_CBAJ_P0066257 Acot11 protein_coding protein_coding MGP_CBAJ_T0065830.1 MGP_CBAJ_G0028080.1 mouse_genomes_project 4 92714269 92716894 - MGP_CBAJ_P0065830 Rps6 protein_coding protein_coding MGP_CBAJ_T0065831.1 MGP_CBAJ_G0028080.1 mouse_genomes_project 4 92714439 92716913 - Rps6 protein_coding processed_transcript MGP_CBAJ_T0065832.1 MGP_CBAJ_G0028080.1 mouse_genomes_project 4 92715319 92716922 - Rps6 protein_coding processed_transcript MGP_CBAJ_T0065833.1 MGP_CBAJ_G0028080.1 mouse_genomes_project 4 92715429 92716900 - Rps6 protein_coding processed_transcript MGP_CBAJ_T0067007.1 MGP_CBAJ_G0028335.1 mouse_genomes_project 4 127572045 127574827 - MGP_CBAJ_P0067007 Tmem125 protein_coding protein_coding MGP_CBAJ_T0067008.1 MGP_CBAJ_G0028335.1 mouse_genomes_project 4 127572963 127575143 - MGP_CBAJ_P0067008 Tmem125 protein_coding protein_coding MGP_CBAJ_T0067009.1 MGP_CBAJ_G0028335.1 mouse_genomes_project 4 127573121 127574061 - MGP_CBAJ_P0067009 Tmem125 protein_coding protein_coding MGP_CBAJ_T0067010.1 MGP_CBAJ_G0028335.1 mouse_genomes_project 4 127573171 127574388 - MGP_CBAJ_P0067010 Tmem125 protein_coding protein_coding MGP_CBAJ_T0067011.1 MGP_CBAJ_G0028335.1 mouse_genomes_project 4 127573700 127574348 - Tmem125 protein_coding processed_transcript MGP_CBAJ_T0004387.1 MGP_CBAJ_G0003822.1 mouse_genomes_project 4 94852287 94857839 - Gm13274 antisense antisense MGP_CBAJ_T0004388.1 MGP_CBAJ_G0003822.1 mouse_genomes_project 4 94852380 94857838 - Gm13274 antisense antisense MGP_CBAJ_T0068693.1 MGP_CBAJ_G0028730.1 mouse_genomes_project 4 156210438 156216146 + MGP_CBAJ_P0068693 Pramel1 protein_coding protein_coding MGP_CBAJ_T0100565.1 MGP_CBAJ_G0038820.1 mouse_genomes_project 4 114146477 114146590 - Gm26047 snoRNA snoRNA MGP_CBAJ_T0014298.1 MGP_CBAJ_G0012410.1 mouse_genomes_project 4 32574521 32575131 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014603.1 MGP_CBAJ_G0012715.1 mouse_genomes_project 4 156508905 156512328 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0068002.1 MGP_CBAJ_G0028567.1 mouse_genomes_project 4 144884692 144887848 - MGP_CBAJ_P0068002 protein_coding protein_coding MGP_CBAJ_T0068003.1 MGP_CBAJ_G0028567.1 mouse_genomes_project 4 144884724 144887094 - protein_coding retained_intron MGP_CBAJ_T0068004.1 MGP_CBAJ_G0028567.1 mouse_genomes_project 4 144884724 144886464 - protein_coding processed_transcript MGP_CBAJ_T0068005.1 MGP_CBAJ_G0028567.1 mouse_genomes_project 4 144884724 144886440 - protein_coding processed_transcript MGP_CBAJ_T0068006.1 MGP_CBAJ_G0028567.1 mouse_genomes_project 4 144884724 144887848 - protein_coding processed_transcript MGP_CBAJ_T0068007.1 MGP_CBAJ_G0028567.1 mouse_genomes_project 4 144884724 144887079 - MGP_CBAJ_P0068007 protein_coding protein_coding MGP_CBAJ_T0068008.1 MGP_CBAJ_G0028567.1 mouse_genomes_project 4 144884778 144887076 - protein_coding retained_intron MGP_CBAJ_T0068009.1 MGP_CBAJ_G0028567.1 mouse_genomes_project 4 144884788 144887046 - protein_coding retained_intron MGP_CBAJ_T0099321.1 MGP_CBAJ_G0037576.1 mouse_genomes_project 4 162395009 162395117 + Gm23318 snRNA snRNA MGP_CBAJ_T0065892.1 MGP_CBAJ_G0028106.1 mouse_genomes_project 4 95916498 95930608 + Dmrta1 protein_coding processed_transcript MGP_CBAJ_T0065893.1 MGP_CBAJ_G0028106.1 mouse_genomes_project 4 95926896 95933469 + MGP_CBAJ_P0065893 Dmrta1 protein_coding protein_coding MGP_CBAJ_T0067322.1 MGP_CBAJ_G0028424.1 mouse_genomes_project 4 134780347 134790684 - MGP_CBAJ_P0067322 Dnali1 protein_coding protein_coding MGP_CBAJ_T0066430.1 MGP_CBAJ_G0028220.1 mouse_genomes_project 4 116846492 116867682 + MGP_CBAJ_P0066430 Zcchc11 protein_coding protein_coding MGP_CBAJ_T0066431.1 MGP_CBAJ_G0028220.1 mouse_genomes_project 4 116846492 116952149 + MGP_CBAJ_P0066431 Zcchc11 protein_coding protein_coding MGP_CBAJ_T0066432.1 MGP_CBAJ_G0028220.1 mouse_genomes_project 4 116847076 116952155 + MGP_CBAJ_P0066432 Zcchc11 protein_coding protein_coding MGP_CBAJ_T0066433.1 MGP_CBAJ_G0028220.1 mouse_genomes_project 4 116867609 116913481 + MGP_CBAJ_P0066433 Zcchc11 protein_coding protein_coding MGP_CBAJ_T0066434.1 MGP_CBAJ_G0028220.1 mouse_genomes_project 4 116915618 116918457 + Zcchc11 protein_coding processed_transcript MGP_CBAJ_T0066435.1 MGP_CBAJ_G0028220.1 mouse_genomes_project 4 116933424 116939445 + Zcchc11 protein_coding processed_transcript MGP_CBAJ_T0066436.1 MGP_CBAJ_G0028220.1 mouse_genomes_project 4 116933523 116934391 + Zcchc11 protein_coding processed_transcript MGP_CBAJ_T0066437.1 MGP_CBAJ_G0028220.1 mouse_genomes_project 4 116933576 116934384 + Zcchc11 protein_coding processed_transcript MGP_CBAJ_T0066438.1 MGP_CBAJ_G0028220.1 mouse_genomes_project 4 116940243 116946131 + Zcchc11 protein_coding processed_transcript MGP_CBAJ_T0066439.1 MGP_CBAJ_G0028220.1 mouse_genomes_project 4 116946147 116952149 + Zcchc11 protein_coding processed_transcript MGP_CBAJ_T0066440.1 MGP_CBAJ_G0028220.1 mouse_genomes_project 4 116946431 116951788 + MGP_CBAJ_P0066440 Zcchc11 protein_coding protein_coding MGP_CBAJ_T0100544.1 MGP_CBAJ_G0038799.1 mouse_genomes_project 4 59658286 59658412 + Gm22300 snoRNA snoRNA MGP_CBAJ_T0068309.1 MGP_CBAJ_G0028636.1 mouse_genomes_project 4 148452681 148455952 - MGP_CBAJ_P0068309 C1qc protein_coding protein_coding MGP_CBAJ_T0068310.1 MGP_CBAJ_G0028636.1 mouse_genomes_project 4 148454538 148455763 - C1qc protein_coding processed_transcript MGP_CBAJ_T0014551.1 MGP_CBAJ_G0012663.1 mouse_genomes_project 4 132784553 132785413 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004336.1 MGP_CBAJ_G0003778.1 mouse_genomes_project 4 6488472 6503679 - Gm11817 antisense antisense MGP_CBAJ_T0101924.1 MGP_CBAJ_G0039955.1 mouse_genomes_project 4 157286333 157289142 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0064678.1 MGP_CBAJ_G0027822.1 mouse_genomes_project 4 41692383 41748528 + MGP_CBAJ_P0064678 Nfx1 protein_coding protein_coding MGP_CBAJ_T0064679.1 MGP_CBAJ_G0027822.1 mouse_genomes_project 4 41692383 41735173 + MGP_CBAJ_P0064679 Nfx1 protein_coding protein_coding MGP_CBAJ_T0064680.1 MGP_CBAJ_G0027822.1 mouse_genomes_project 4 41692383 41736436 + MGP_CBAJ_P0064680 Nfx1 protein_coding protein_coding MGP_CBAJ_T0064681.1 MGP_CBAJ_G0027822.1 mouse_genomes_project 4 41723997 41734734 + Nfx1 protein_coding processed_transcript MGP_CBAJ_T0064682.1 MGP_CBAJ_G0027822.1 mouse_genomes_project 4 41731771 41744853 + Nfx1 protein_coding processed_transcript MGP_CBAJ_T0064683.1 MGP_CBAJ_G0027822.1 mouse_genomes_project 4 41743898 41747713 + Nfx1 protein_coding processed_transcript MGP_CBAJ_T0064684.1 MGP_CBAJ_G0027822.1 mouse_genomes_project 4 41745738 41747075 + Nfx1 protein_coding processed_transcript MGP_CBAJ_T0010481.1 MGP_CBAJ_G0008619.1 mouse_genomes_project 4 105591875 105592001 - Gm22625 miRNA miRNA MGP_CBAJ_T0064190.1 MGP_CBAJ_G0027707.1 mouse_genomes_project 4 2285459 2447397 + Fam110b protein_coding processed_transcript MGP_CBAJ_T0064191.1 MGP_CBAJ_G0027707.1 mouse_genomes_project 4 2285490 2450116 + MGP_CBAJ_P0064191 Fam110b protein_coding protein_coding MGP_CBAJ_T0064192.1 MGP_CBAJ_G0027707.1 mouse_genomes_project 4 2285494 2381916 + Fam110b protein_coding retained_intron MGP_CBAJ_T0064193.1 MGP_CBAJ_G0027707.1 mouse_genomes_project 4 2285559 2447509 + Fam110b protein_coding processed_transcript MGP_CBAJ_T0064194.1 MGP_CBAJ_G0027707.1 mouse_genomes_project 4 2285604 2792253 + Fam110b protein_coding processed_transcript MGP_CBAJ_T0064195.1 MGP_CBAJ_G0027707.1 mouse_genomes_project 4 2368077 2450116 + MGP_CBAJ_P0064195 Fam110b protein_coding protein_coding MGP_CBAJ_T0064196.1 MGP_CBAJ_G0027707.1 mouse_genomes_project 4 2419645 2447860 + MGP_CBAJ_P0064196 Fam110b protein_coding protein_coding MGP_CBAJ_T0064197.1 MGP_CBAJ_G0027707.1 mouse_genomes_project 4 2419645 2448961 + MGP_CBAJ_P0064197 Fam110b protein_coding protein_coding MGP_CBAJ_T0064198.1 MGP_CBAJ_G0027707.1 mouse_genomes_project 4 2447098 2447546 + Fam110b protein_coding processed_transcript MGP_CBAJ_T0007855.1 MGP_CBAJ_G0006409.1 mouse_genomes_project 4 137501363 137536440 + A630031M04Rik lincRNA lincRNA MGP_CBAJ_T0007695.1 MGP_CBAJ_G0006283.1 mouse_genomes_project 4 7645507 7929103 - lincRNA lincRNA MGP_CBAJ_T0007696.1 MGP_CBAJ_G0006283.1 mouse_genomes_project 4 7666923 7989139 - lincRNA lincRNA MGP_CBAJ_T0007697.1 MGP_CBAJ_G0006283.1 mouse_genomes_project 4 7931936 7989123 - lincRNA lincRNA MGP_CBAJ_T0007698.1 MGP_CBAJ_G0006283.1 mouse_genomes_project 4 7932212 7989126 - lincRNA lincRNA MGP_CBAJ_T0014207.1 MGP_CBAJ_G0012319.1 mouse_genomes_project 4 5399017 5399349 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0066343.1 MGP_CBAJ_G0028205.1 mouse_genomes_project 4 115657114 115658560 + Glis1 protein_coding processed_transcript MGP_CBAJ_T0066344.1 MGP_CBAJ_G0028205.1 mouse_genomes_project 4 115657140 115791092 + MGP_CBAJ_P0066344 Glis1 protein_coding protein_coding MGP_CBAJ_T0066345.1 MGP_CBAJ_G0028205.1 mouse_genomes_project 4 115657242 115861922 + MGP_CBAJ_P0066345 Glis1 protein_coding protein_coding MGP_CBAJ_T0066346.1 MGP_CBAJ_G0028205.1 mouse_genomes_project 4 115661521 115861922 + MGP_CBAJ_P0066346 Glis1 protein_coding protein_coding MGP_CBAJ_T0066347.1 MGP_CBAJ_G0028205.1 mouse_genomes_project 4 115808224 115854333 + Glis1 protein_coding processed_transcript MGP_CBAJ_T0066348.1 MGP_CBAJ_G0028205.1 mouse_genomes_project 4 115841857 115859257 + Glis1 protein_coding processed_transcript MGP_CBAJ_T0064332.1 MGP_CBAJ_G0027734.1 mouse_genomes_project 4 9411991 9464163 - MGP_CBAJ_P0064332 Tmem67 protein_coding protein_coding MGP_CBAJ_T0064333.1 MGP_CBAJ_G0027734.1 mouse_genomes_project 4 9411999 9464144 - MGP_CBAJ_P0064333 Tmem67 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064334.1 MGP_CBAJ_G0027734.1 mouse_genomes_project 4 9412281 9465677 - MGP_CBAJ_P0064334 Tmem67 protein_coding protein_coding MGP_CBAJ_T0064335.1 MGP_CBAJ_G0027734.1 mouse_genomes_project 4 9437188 9464213 - Tmem67 protein_coding retained_intron MGP_CBAJ_T0064336.1 MGP_CBAJ_G0027734.1 mouse_genomes_project 4 9443198 9464133 - Tmem67 protein_coding retained_intron MGP_CBAJ_T0064337.1 MGP_CBAJ_G0027734.1 mouse_genomes_project 4 9454793 9464138 - Tmem67 protein_coding retained_intron MGP_CBAJ_T0067985.1 MGP_CBAJ_G0028564.1 mouse_genomes_project 4 144511633 144527098 - MGP_CBAJ_P0067985 Pigv protein_coding protein_coding MGP_CBAJ_T0067986.1 MGP_CBAJ_G0028564.1 mouse_genomes_project 4 144513491 144527098 - MGP_CBAJ_P0067986 Pigv protein_coding protein_coding MGP_CBAJ_T0067987.1 MGP_CBAJ_G0028564.1 mouse_genomes_project 4 144523198 144527098 - Pigv protein_coding processed_transcript MGP_CBAJ_T0007904.1 MGP_CBAJ_G0006442.1 mouse_genomes_project 4 152057834 152059277 + Gm1667 lincRNA lincRNA MGP_CBAJ_T0004337.1 MGP_CBAJ_G0003779.1 mouse_genomes_project 4 8811546 8812924 - Gm11831 antisense antisense MGP_CBAJ_T0014499.1 MGP_CBAJ_G0012611.1 mouse_genomes_project 4 116655543 116655851 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068757.1 MGP_CBAJ_G0028768.1 mouse_genomes_project 4 158507466 158561046 - MGP_CBAJ_P0068757 Tnfrsf8 protein_coding protein_coding MGP_CBAJ_T0068758.1 MGP_CBAJ_G0028768.1 mouse_genomes_project 4 158507468 158561063 - MGP_CBAJ_P0068758 Tnfrsf8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065348.1 MGP_CBAJ_G0027965.1 mouse_genomes_project 4 55833552 55958699 + MGP_CBAJ_P0065348 Slc44a1 protein_coding protein_coding MGP_CBAJ_T0065349.1 MGP_CBAJ_G0027965.1 mouse_genomes_project 4 55833552 56039541 + MGP_CBAJ_P0065349 Slc44a1 protein_coding protein_coding MGP_CBAJ_T0065350.1 MGP_CBAJ_G0027965.1 mouse_genomes_project 4 55833727 55983908 + MGP_CBAJ_P0065350 Slc44a1 protein_coding protein_coding MGP_CBAJ_T0065351.1 MGP_CBAJ_G0027965.1 mouse_genomes_project 4 55833810 55937116 + Slc44a1 protein_coding processed_transcript MGP_CBAJ_T0065352.1 MGP_CBAJ_G0027965.1 mouse_genomes_project 4 55833823 55979550 + MGP_CBAJ_P0065352 Slc44a1 protein_coding protein_coding MGP_CBAJ_T0065353.1 MGP_CBAJ_G0027965.1 mouse_genomes_project 4 56012174 56039050 + Slc44a1 protein_coding processed_transcript MGP_CBAJ_T0014527.1 MGP_CBAJ_G0012639.1 mouse_genomes_project 4 126443575 126443954 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065877.1 MGP_CBAJ_G0028093.1 mouse_genomes_project 4 94750311 94750881 - MGP_CBAJ_P0065877 Ifna16 protein_coding protein_coding MGP_CBAJ_T0067349.1 MGP_CBAJ_G0028432.1 mouse_genomes_project 4 135845280 135847241 + MGP_CBAJ_P0067349 Lsm10 protein_coding protein_coding MGP_CBAJ_T0067350.1 MGP_CBAJ_G0028432.1 mouse_genomes_project 4 135845310 135847238 + MGP_CBAJ_P0067350 Lsm10 protein_coding protein_coding MGP_CBAJ_T0067351.1 MGP_CBAJ_G0028432.1 mouse_genomes_project 4 135845317 135846790 + MGP_CBAJ_P0067351 Lsm10 protein_coding protein_coding MGP_CBAJ_T0069524.1 MGP_CBAJ_G0028914.1 mouse_genomes_project 4 171341841 171347305 + MGP_CBAJ_P0069524 Perm1 protein_coding protein_coding MGP_CBAJ_T0065522.1 MGP_CBAJ_G0028013.1 mouse_genomes_project 4 65552287 65569060 + MGP_CBAJ_P0065522 Slc31a2 protein_coding protein_coding MGP_CBAJ_T0004533.1 MGP_CBAJ_G0003929.1 mouse_genomes_project 4 170810424 170818425 + Atad3aos antisense antisense MGP_CBAJ_T0004534.1 MGP_CBAJ_G0003929.1 mouse_genomes_project 4 170810438 170811506 + Atad3aos antisense antisense MGP_CBAJ_T0004535.1 MGP_CBAJ_G0003929.1 mouse_genomes_project 4 170810456 170812795 + Atad3aos antisense antisense MGP_CBAJ_T0004536.1 MGP_CBAJ_G0003929.1 mouse_genomes_project 4 170810467 170812806 + Atad3aos antisense antisense MGP_CBAJ_T0066900.1 MGP_CBAJ_G0028314.1 mouse_genomes_project 4 126480197 126615411 + MGP_CBAJ_P0066900 Eri3 protein_coding protein_coding MGP_CBAJ_T0066901.1 MGP_CBAJ_G0028314.1 mouse_genomes_project 4 126482441 126512444 + MGP_CBAJ_P0066901 Eri3 protein_coding protein_coding MGP_CBAJ_T0066902.1 MGP_CBAJ_G0028314.1 mouse_genomes_project 4 126494523 126615411 + Eri3 protein_coding processed_transcript MGP_CBAJ_T0066903.1 MGP_CBAJ_G0028314.1 mouse_genomes_project 4 126512413 126552332 + MGP_CBAJ_P0066903 Eri3 protein_coding protein_coding MGP_CBAJ_T0066904.1 MGP_CBAJ_G0028314.1 mouse_genomes_project 4 126518804 126551991 + Eri3 protein_coding processed_transcript MGP_CBAJ_T0066905.1 MGP_CBAJ_G0028314.1 mouse_genomes_project 4 126574374 126615395 + Eri3 protein_coding processed_transcript MGP_CBAJ_T0017856.1 MGP_CBAJ_G0015328.1 mouse_genomes_project 4 170381045 170414433 - 5830444B04Rik processed_transcript processed_transcript MGP_CBAJ_T0017857.1 MGP_CBAJ_G0015328.1 mouse_genomes_project 4 170393624 170400934 - 5830444B04Rik processed_transcript processed_transcript MGP_CBAJ_T0017858.1 MGP_CBAJ_G0015328.1 mouse_genomes_project 4 170393625 170414424 - 5830444B04Rik processed_transcript processed_transcript MGP_CBAJ_T0017859.1 MGP_CBAJ_G0015328.1 mouse_genomes_project 4 170394833 170400913 - 5830444B04Rik processed_transcript processed_transcript MGP_CBAJ_T0007817.1 MGP_CBAJ_G0006384.1 mouse_genomes_project 4 114973433 114979596 - Gm12746 lincRNA lincRNA MGP_CBAJ_T0067030.1 MGP_CBAJ_G0028349.1 mouse_genomes_project 4 128014912 128015860 - MGP_CBAJ_P0067030 protein_coding protein_coding MGP_CBAJ_T0065502.1 MGP_CBAJ_G0028004.1 mouse_genomes_project 4 62634495 62786143 + MGP_CBAJ_P0065502 E130308A19Rik protein_coding protein_coding MGP_CBAJ_T0065503.1 MGP_CBAJ_G0028004.1 mouse_genomes_project 4 62634527 62739533 + MGP_CBAJ_P0065503 E130308A19Rik protein_coding protein_coding MGP_CBAJ_T0065504.1 MGP_CBAJ_G0028004.1 mouse_genomes_project 4 62706366 62738375 + E130308A19Rik protein_coding processed_transcript MGP_CBAJ_T0014414.1 MGP_CBAJ_G0012526.1 mouse_genomes_project 4 81389560 81392017 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0017843.1 MGP_CBAJ_G0015320.1 mouse_genomes_project 4 142375805 142403738 - Gm12992 processed_transcript processed_transcript MGP_CBAJ_T0017844.1 MGP_CBAJ_G0015320.1 mouse_genomes_project 4 142396146 142399229 - Gm12992 processed_transcript processed_transcript MGP_CBAJ_T0067856.1 MGP_CBAJ_G0028532.1 mouse_genomes_project 4 142926504 143005329 - MGP_CBAJ_P0067856 Phactr4 protein_coding protein_coding MGP_CBAJ_T0067857.1 MGP_CBAJ_G0028532.1 mouse_genomes_project 4 142926511 143005286 - MGP_CBAJ_P0067857 Phactr4 protein_coding protein_coding MGP_CBAJ_T0067858.1 MGP_CBAJ_G0028532.1 mouse_genomes_project 4 142928843 142979670 - MGP_CBAJ_P0067858 Phactr4 protein_coding protein_coding MGP_CBAJ_T0067859.1 MGP_CBAJ_G0028532.1 mouse_genomes_project 4 142931284 142943592 - Phactr4 protein_coding processed_transcript MGP_CBAJ_T0067860.1 MGP_CBAJ_G0028532.1 mouse_genomes_project 4 142944011 143005281 - MGP_CBAJ_P0067860 Phactr4 protein_coding protein_coding MGP_CBAJ_T0067861.1 MGP_CBAJ_G0028532.1 mouse_genomes_project 4 142953119 142979658 - MGP_CBAJ_P0067861 Phactr4 protein_coding protein_coding MGP_CBAJ_T0067181.1 MGP_CBAJ_G0028387.1 mouse_genomes_project 4 130522571 130559340 - MGP_CBAJ_P0067181 Rlf protein_coding protein_coding MGP_CBAJ_T0067182.1 MGP_CBAJ_G0028387.1 mouse_genomes_project 4 130523082 130593481 - MGP_CBAJ_P0067182 Rlf protein_coding protein_coding MGP_CBAJ_T0067183.1 MGP_CBAJ_G0028387.1 mouse_genomes_project 4 130547786 130559340 - MGP_CBAJ_P0067183 Rlf protein_coding protein_coding MGP_CBAJ_T0014550.1 MGP_CBAJ_G0012662.1 mouse_genomes_project 4 132033143 132036021 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068197.1 MGP_CBAJ_G0028607.1 mouse_genomes_project 4 146765254 146789642 + Stpg1 protein_coding processed_transcript MGP_CBAJ_T0068198.1 MGP_CBAJ_G0028607.1 mouse_genomes_project 4 146766438 146809783 + Stpg1 protein_coding processed_transcript MGP_CBAJ_T0068199.1 MGP_CBAJ_G0028607.1 mouse_genomes_project 4 146766448 146813596 + MGP_CBAJ_P0068199 Stpg1 protein_coding protein_coding MGP_CBAJ_T0098039.1 MGP_CBAJ_G0036312.1 mouse_genomes_project 4 10232699 10232806 + n-R5s182 rRNA rRNA MGP_CBAJ_T0014245.1 MGP_CBAJ_G0012357.1 mouse_genomes_project 4 16526560 16527006 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014529.1 MGP_CBAJ_G0012641.1 mouse_genomes_project 4 126699834 126700149 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004492.1 MGP_CBAJ_G0003899.1 mouse_genomes_project 4 154614870 154625847 + 4930455G09Rik antisense antisense MGP_CBAJ_T0004472.1 MGP_CBAJ_G0003883.1 mouse_genomes_project 4 149116745 149132190 - antisense antisense MGP_CBAJ_T0067705.1 MGP_CBAJ_G0028504.1 mouse_genomes_project 4 140452494 140512897 + MGP_CBAJ_P0067705 Col16a1 protein_coding protein_coding MGP_CBAJ_T0067706.1 MGP_CBAJ_G0028504.1 mouse_genomes_project 4 140452529 140454371 + MGP_CBAJ_P0067706 Col16a1 protein_coding protein_coding MGP_CBAJ_T0067707.1 MGP_CBAJ_G0028504.1 mouse_genomes_project 4 140452539 140503682 + Col16a1 protein_coding processed_transcript MGP_CBAJ_T0067708.1 MGP_CBAJ_G0028504.1 mouse_genomes_project 4 140452563 140487199 + Col16a1 protein_coding processed_transcript MGP_CBAJ_T0067709.1 MGP_CBAJ_G0028504.1 mouse_genomes_project 4 140452599 140456500 + MGP_CBAJ_P0067709 Col16a1 protein_coding protein_coding MGP_CBAJ_T0067710.1 MGP_CBAJ_G0028504.1 mouse_genomes_project 4 140452616 140512903 + MGP_CBAJ_P0067710 Col16a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067711.1 MGP_CBAJ_G0028504.1 mouse_genomes_project 4 140459631 140463192 + MGP_CBAJ_P0067711 Col16a1 protein_coding protein_coding MGP_CBAJ_T0067712.1 MGP_CBAJ_G0028504.1 mouse_genomes_project 4 140459676 140460638 + Col16a1 protein_coding retained_intron MGP_CBAJ_T0067713.1 MGP_CBAJ_G0028504.1 mouse_genomes_project 4 140460600 140512897 + MGP_CBAJ_P0067713 Col16a1 protein_coding protein_coding MGP_CBAJ_T0067714.1 MGP_CBAJ_G0028504.1 mouse_genomes_project 4 140472940 140488297 + Col16a1 protein_coding processed_transcript MGP_CBAJ_T0067715.1 MGP_CBAJ_G0028504.1 mouse_genomes_project 4 140483895 140487006 + Col16a1 protein_coding processed_transcript MGP_CBAJ_T0067716.1 MGP_CBAJ_G0028504.1 mouse_genomes_project 4 140485820 140487418 + Col16a1 protein_coding processed_transcript MGP_CBAJ_T0067717.1 MGP_CBAJ_G0028504.1 mouse_genomes_project 4 140511223 140512896 + Col16a1 protein_coding processed_transcript MGP_CBAJ_T0068582.1 MGP_CBAJ_G0028701.1 mouse_genomes_project 4 153520549 153584997 + MGP_CBAJ_P0068582 Fbxo42 protein_coding protein_coding MGP_CBAJ_T0068583.1 MGP_CBAJ_G0028701.1 mouse_genomes_project 4 153520558 153575965 + Fbxo42 protein_coding processed_transcript MGP_CBAJ_T0068488.1 MGP_CBAJ_G0028679.1 mouse_genomes_project 4 151470105 151590625 + MGP_CBAJ_P0068488 Ubr4 protein_coding protein_coding MGP_CBAJ_T0068490.1 MGP_CBAJ_G0028679.1 mouse_genomes_project 4 151501752 151614338 + MGP_CBAJ_P0068490 Ubr4 protein_coding protein_coding MGP_CBAJ_T0068491.1 MGP_CBAJ_G0028679.1 mouse_genomes_project 4 151501752 151614396 + MGP_CBAJ_P0068491 Ubr4 protein_coding protein_coding MGP_CBAJ_T0068492.1 MGP_CBAJ_G0028679.1 mouse_genomes_project 4 151501762 151518754 + Ubr4 protein_coding processed_transcript MGP_CBAJ_T0068493.1 MGP_CBAJ_G0028679.1 mouse_genomes_project 4 151535574 151572811 + MGP_CBAJ_P0068493 Ubr4 protein_coding protein_coding MGP_CBAJ_T0068494.1 MGP_CBAJ_G0028679.1 mouse_genomes_project 4 151537329 151538144 + Ubr4 protein_coding retained_intron MGP_CBAJ_T0068495.1 MGP_CBAJ_G0028679.1 mouse_genomes_project 4 151555869 151559025 + MGP_CBAJ_P0068495 Ubr4 protein_coding protein_coding MGP_CBAJ_T0068496.1 MGP_CBAJ_G0028679.1 mouse_genomes_project 4 151584132 151584849 + Ubr4 protein_coding retained_intron MGP_CBAJ_T0068497.1 MGP_CBAJ_G0028679.1 mouse_genomes_project 4 151597956 151604593 + Ubr4 protein_coding retained_intron MGP_CBAJ_T0068498.1 MGP_CBAJ_G0028679.1 mouse_genomes_project 4 151602726 151606384 + Ubr4 protein_coding processed_transcript MGP_CBAJ_T0068499.1 MGP_CBAJ_G0028679.1 mouse_genomes_project 4 151602909 151604836 + Ubr4 protein_coding retained_intron MGP_CBAJ_T0068500.1 MGP_CBAJ_G0028679.1 mouse_genomes_project 4 151604162 151606466 + Ubr4 protein_coding retained_intron MGP_CBAJ_T0014450.1 MGP_CBAJ_G0012562.1 mouse_genomes_project 4 98065109 98066441 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014276.1 MGP_CBAJ_G0012388.1 mouse_genomes_project 4 26030963 26031211 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067361.1 MGP_CBAJ_G0028435.1 mouse_genomes_project 4 135899197 135911284 - Sh3d21 protein_coding processed_transcript MGP_CBAJ_T0067362.1 MGP_CBAJ_G0028435.1 mouse_genomes_project 4 135899197 135911245 - MGP_CBAJ_P0067362 Sh3d21 protein_coding protein_coding MGP_CBAJ_T0067363.1 MGP_CBAJ_G0028435.1 mouse_genomes_project 4 135899197 135912110 - MGP_CBAJ_P0067363 Sh3d21 protein_coding protein_coding MGP_CBAJ_T0067364.1 MGP_CBAJ_G0028435.1 mouse_genomes_project 4 135899203 135911220 - Sh3d21 protein_coding processed_transcript MGP_CBAJ_T0067365.1 MGP_CBAJ_G0028435.1 mouse_genomes_project 4 135900152 135911275 - Sh3d21 protein_coding processed_transcript MGP_CBAJ_T0014606.1 MGP_CBAJ_G0012718.1 mouse_genomes_project 4 157357809 157359070 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068654.1 MGP_CBAJ_G0028720.1 mouse_genomes_project 4 154363774 154368262 + Casp9 protein_coding processed_transcript MGP_CBAJ_T0068655.1 MGP_CBAJ_G0028720.1 mouse_genomes_project 4 154363872 154374640 + MGP_CBAJ_P0068655 Casp9 protein_coding protein_coding MGP_CBAJ_T0068656.1 MGP_CBAJ_G0028720.1 mouse_genomes_project 4 154364006 154366749 + Casp9 protein_coding processed_transcript MGP_CBAJ_T0068657.1 MGP_CBAJ_G0028720.1 mouse_genomes_project 4 154364017 154385170 + MGP_CBAJ_P0068657 Casp9 protein_coding protein_coding MGP_CBAJ_T0068658.1 MGP_CBAJ_G0028720.1 mouse_genomes_project 4 154384040 154385200 + Casp9 protein_coding processed_transcript MGP_CBAJ_T0014372.1 MGP_CBAJ_G0012484.1 mouse_genomes_project 4 59051048 59051830 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007741.1 MGP_CBAJ_G0006323.1 mouse_genomes_project 4 55620674 55629541 - AI427809 lincRNA lincRNA MGP_CBAJ_T0007742.1 MGP_CBAJ_G0006323.1 mouse_genomes_project 4 55621211 55621866 - AI427809 lincRNA lincRNA MGP_CBAJ_T0007743.1 MGP_CBAJ_G0006323.1 mouse_genomes_project 4 55621773 55624801 - AI427809 lincRNA lincRNA MGP_CBAJ_T0007744.1 MGP_CBAJ_G0006323.1 mouse_genomes_project 4 55622050 55623150 - AI427809 lincRNA lincRNA MGP_CBAJ_T0014230.1 MGP_CBAJ_G0012342.1 mouse_genomes_project 4 13429282 13430120 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004343.1 MGP_CBAJ_G0003783.1 mouse_genomes_project 4 12621062 12630468 + Gm11844 antisense antisense MGP_CBAJ_T0064620.1 MGP_CBAJ_G0027808.1 mouse_genomes_project 4 35722037 35887588 - MGP_CBAJ_P0064620 Lingo2 protein_coding protein_coding MGP_CBAJ_T0064621.1 MGP_CBAJ_G0027808.1 mouse_genomes_project 4 35722796 37165434 - MGP_CBAJ_P0064621 Lingo2 protein_coding protein_coding MGP_CBAJ_T0064622.1 MGP_CBAJ_G0027808.1 mouse_genomes_project 4 35722796 36231865 - MGP_CBAJ_P0064622 Lingo2 protein_coding protein_coding MGP_CBAJ_T0064623.1 MGP_CBAJ_G0027808.1 mouse_genomes_project 4 35722796 35887588 - MGP_CBAJ_P0064623 Lingo2 protein_coding protein_coding MGP_CBAJ_T0064624.1 MGP_CBAJ_G0027808.1 mouse_genomes_project 4 35723233 36134552 - MGP_CBAJ_P0064624 Lingo2 protein_coding protein_coding MGP_CBAJ_T0064625.1 MGP_CBAJ_G0027808.1 mouse_genomes_project 4 36134549 37164697 - Lingo2 protein_coding processed_transcript MGP_CBAJ_T0064626.1 MGP_CBAJ_G0027808.1 mouse_genomes_project 4 36883134 37165955 - Lingo2 protein_coding processed_transcript MGP_CBAJ_T0064627.1 MGP_CBAJ_G0027808.1 mouse_genomes_project 4 36885871 37164678 - Lingo2 protein_coding processed_transcript MGP_CBAJ_T0064628.1 MGP_CBAJ_G0027808.1 mouse_genomes_project 4 36886116 37164700 - Lingo2 protein_coding processed_transcript MGP_CBAJ_T0064629.1 MGP_CBAJ_G0027808.1 mouse_genomes_project 4 37165310 37165958 - Lingo2 protein_coding processed_transcript MGP_CBAJ_T0069006.1 MGP_CBAJ_G0028819.1 mouse_genomes_project 4 164902454 164926060 - MGP_CBAJ_P0069006 Slc45a1 protein_coding protein_coding MGP_CBAJ_T0069007.1 MGP_CBAJ_G0028819.1 mouse_genomes_project 4 164903920 164925983 - MGP_CBAJ_P0069007 Slc45a1 protein_coding protein_coding MGP_CBAJ_T0069008.1 MGP_CBAJ_G0028819.1 mouse_genomes_project 4 164917458 164918259 - Slc45a1 protein_coding retained_intron MGP_CBAJ_T0014622.1 MGP_CBAJ_G0012734.1 mouse_genomes_project 4 168867403 168868093 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0068836.1 MGP_CBAJ_G0028789.1 mouse_genomes_project 4 162325751 162331252 - MGP_CBAJ_P0068836 Angptl7 protein_coding protein_coding MGP_CBAJ_T0068853.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162477093 162492120 - MGP_CBAJ_P0068853 Tardbp protein_coding protein_coding MGP_CBAJ_T0068854.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162477093 162492097 - MGP_CBAJ_P0068854 Tardbp protein_coding protein_coding MGP_CBAJ_T0068855.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162477093 162492097 - MGP_CBAJ_P0068855 Tardbp protein_coding protein_coding MGP_CBAJ_T0068856.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162477093 162492097 - MGP_CBAJ_P0068856 Tardbp protein_coding protein_coding MGP_CBAJ_T0068857.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162477098 162491863 - MGP_CBAJ_P0068857 Tardbp protein_coding nonsense_mediated_decay MGP_CBAJ_T0068858.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162477099 162480837 - Tardbp protein_coding processed_transcript MGP_CBAJ_T0068859.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162477099 162483771 - MGP_CBAJ_P0068859 Tardbp protein_coding protein_coding MGP_CBAJ_T0068860.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162477196 162484280 - MGP_CBAJ_P0068860 Tardbp protein_coding nonsense_mediated_decay MGP_CBAJ_T0068861.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162480164 162483075 - Tardbp protein_coding processed_transcript MGP_CBAJ_T0068862.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162480308 162482308 - Tardbp protein_coding processed_transcript MGP_CBAJ_T0068863.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162480457 162482738 - Tardbp protein_coding processed_transcript MGP_CBAJ_T0068864.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162480617 162491866 - MGP_CBAJ_P0068864 Tardbp protein_coding nonsense_mediated_decay MGP_CBAJ_T0068865.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162481334 162483367 - MGP_CBAJ_P0068865 Tardbp protein_coding nonsense_mediated_decay MGP_CBAJ_T0068866.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162481414 162487052 - MGP_CBAJ_P0068866 Tardbp protein_coding nonsense_mediated_decay MGP_CBAJ_T0068867.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162481419 162485694 - MGP_CBAJ_P0068867 Tardbp protein_coding nonsense_mediated_decay MGP_CBAJ_T0068868.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162481423 162491859 - MGP_CBAJ_P0068868 Tardbp protein_coding nonsense_mediated_decay MGP_CBAJ_T0068869.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162481423 162485689 - MGP_CBAJ_P0068869 Tardbp protein_coding nonsense_mediated_decay MGP_CBAJ_T0068870.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162481424 162484354 - MGP_CBAJ_P0068870 Tardbp protein_coding nonsense_mediated_decay MGP_CBAJ_T0068871.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162481896 162484290 - MGP_CBAJ_P0068871 Tardbp protein_coding protein_coding MGP_CBAJ_T0068872.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162482206 162485616 - MGP_CBAJ_P0068872 Tardbp protein_coding protein_coding MGP_CBAJ_T0068873.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162482336 162490451 - MGP_CBAJ_P0068873 Tardbp protein_coding protein_coding MGP_CBAJ_T0068874.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162482439 162490451 - MGP_CBAJ_P0068874 Tardbp protein_coding protein_coding MGP_CBAJ_T0068875.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162482439 162490451 - MGP_CBAJ_P0068875 Tardbp protein_coding protein_coding MGP_CBAJ_T0068876.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162482493 162487159 - MGP_CBAJ_P0068876 Tardbp protein_coding protein_coding MGP_CBAJ_T0068877.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162483034 162491871 - MGP_CBAJ_P0068877 Tardbp protein_coding nonsense_mediated_decay MGP_CBAJ_T0068878.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162483604 162491855 - MGP_CBAJ_P0068878 Tardbp protein_coding protein_coding MGP_CBAJ_T0068879.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162485691 162491427 - MGP_CBAJ_P0068879 Tardbp protein_coding protein_coding MGP_CBAJ_T0068880.1 MGP_CBAJ_G0028793.1 mouse_genomes_project 4 162490173 162491859 - Tardbp protein_coding retained_intron MGP_CBAJ_T0004522.1 MGP_CBAJ_G0003921.1 mouse_genomes_project 4 168922053 168926924 + Trp73os antisense antisense MGP_CBAJ_T0014588.1 MGP_CBAJ_G0012700.1 mouse_genomes_project 4 147350595 147350960 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011459.1 MGP_CBAJ_G0009597.1 mouse_genomes_project 4 166725897 166726233 - Gm27500 misc_RNA misc_RNA MGP_CBAJ_T0064391.1 MGP_CBAJ_G0027752.1 mouse_genomes_project 4 17693942 17757158 - MGP_CBAJ_P0064391 Cpne3 protein_coding protein_coding MGP_CBAJ_T0064392.1 MGP_CBAJ_G0027752.1 mouse_genomes_project 4 17723360 17726417 - Cpne3 protein_coding processed_transcript MGP_CBAJ_T0064393.1 MGP_CBAJ_G0027752.1 mouse_genomes_project 4 17731406 17757133 - Cpne3 protein_coding retained_intron MGP_CBAJ_T0007706.1 MGP_CBAJ_G0006290.1 mouse_genomes_project 4 11402674 11490474 - Gm11823 lincRNA lincRNA MGP_CBAJ_T0065235.1 MGP_CBAJ_G0027931.1 mouse_genomes_project 4 48613834 48642021 + MGP_CBAJ_P0065235 Galnt12 protein_coding protein_coding MGP_CBAJ_T0014544.1 MGP_CBAJ_G0012656.1 mouse_genomes_project 4 130502237 130503219 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014321.1 MGP_CBAJ_G0012433.1 mouse_genomes_project 4 40427802 40428490 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007762.1 MGP_CBAJ_G0006338.1 mouse_genomes_project 4 66048496 66061636 + lincRNA lincRNA MGP_CBAJ_T0101900.1 MGP_CBAJ_G0039931.1 mouse_genomes_project 4 103188194 103205065 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0007721.1 MGP_CBAJ_G0006304.1 mouse_genomes_project 4 30157277 30315336 + 4930556G01Rik lincRNA lincRNA MGP_CBAJ_T0014362.1 MGP_CBAJ_G0012474.1 mouse_genomes_project 4 56319340 56319744 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007794.1 MGP_CBAJ_G0006366.1 mouse_genomes_project 4 101802251 101804589 - 4930551L18Rik lincRNA lincRNA MGP_CBAJ_T0064698.1 MGP_CBAJ_G0027827.1 mouse_genomes_project 4 41963281 42054935 - MGP_CBAJ_P0064698 Ubap2 protein_coding unknown_likely_coding MGP_CBAJ_T0064699.1 MGP_CBAJ_G0027827.1 mouse_genomes_project 4 41963289 42055030 - MGP_CBAJ_P0064699 Ubap2 protein_coding protein_coding MGP_CBAJ_T0064700.1 MGP_CBAJ_G0027827.1 mouse_genomes_project 4 41963292 42055021 - MGP_CBAJ_P0064700 Ubap2 protein_coding protein_coding MGP_CBAJ_T0064701.1 MGP_CBAJ_G0027827.1 mouse_genomes_project 4 41974310 41975170 - Ubap2 protein_coding processed_transcript MGP_CBAJ_T0064702.1 MGP_CBAJ_G0027827.1 mouse_genomes_project 4 41981950 41988885 - MGP_CBAJ_P0064702 Ubap2 protein_coding protein_coding MGP_CBAJ_T0064703.1 MGP_CBAJ_G0027827.1 mouse_genomes_project 4 41996628 42026629 - MGP_CBAJ_P0064703 Ubap2 protein_coding protein_coding MGP_CBAJ_T0064704.1 MGP_CBAJ_G0027827.1 mouse_genomes_project 4 41996631 42055002 - Ubap2 protein_coding processed_transcript MGP_CBAJ_T0064705.1 MGP_CBAJ_G0027827.1 mouse_genomes_project 4 42053951 42055013 - Ubap2 protein_coding processed_transcript MGP_CBAJ_T0011432.1 MGP_CBAJ_G0009570.1 mouse_genomes_project 4 34314191 34314296 + Gm23466 misc_RNA misc_RNA MGP_CBAJ_T0068096.1 MGP_CBAJ_G0028585.1 mouse_genomes_project 4 145340960 145341259 - MGP_CBAJ_P0068096 Gm8186 protein_coding protein_coding MGP_CBAJ_T0001367.1 MGP_CBAJ_G0001293.1 mouse_genomes_project 4 5381343 5397098 - TEC TEC MGP_CBAJ_T0065916.1 MGP_CBAJ_G0028113.1 mouse_genomes_project 4 101227637 101236630 - Plaa protein_coding processed_transcript MGP_CBAJ_T0065917.1 MGP_CBAJ_G0028113.1 mouse_genomes_project 4 101229290 101273397 - MGP_CBAJ_P0065917 Plaa protein_coding protein_coding MGP_CBAJ_T0065918.1 MGP_CBAJ_G0028113.1 mouse_genomes_project 4 101231810 101244991 - MGP_CBAJ_P0065918 Plaa protein_coding protein_coding MGP_CBAJ_T0065919.1 MGP_CBAJ_G0028113.1 mouse_genomes_project 4 101234103 101244970 - Plaa protein_coding processed_transcript MGP_CBAJ_T0065920.1 MGP_CBAJ_G0028113.1 mouse_genomes_project 4 101247252 101273288 - Plaa protein_coding processed_transcript MGP_CBAJ_T0065921.1 MGP_CBAJ_G0028113.1 mouse_genomes_project 4 101251019 101273334 - Plaa protein_coding processed_transcript MGP_CBAJ_T0007854.1 MGP_CBAJ_G0006408.1 mouse_genomes_project 4 137487956 137489218 + 1700080G11Rik lincRNA lincRNA MGP_CBAJ_T0069369.1 MGP_CBAJ_G0028881.1 mouse_genomes_project 4 170636109 170660372 + MGP_CBAJ_P0069369 Slc35e2 protein_coding protein_coding MGP_CBAJ_T0069370.1 MGP_CBAJ_G0028881.1 mouse_genomes_project 4 170636304 170657147 + MGP_CBAJ_P0069370 Slc35e2 protein_coding protein_coding MGP_CBAJ_T0069371.1 MGP_CBAJ_G0028881.1 mouse_genomes_project 4 170636636 170656376 + MGP_CBAJ_P0069371 Slc35e2 protein_coding protein_coding MGP_CBAJ_T0069372.1 MGP_CBAJ_G0028881.1 mouse_genomes_project 4 170644897 170656253 + Slc35e2 protein_coding processed_transcript MGP_CBAJ_T0007754.1 MGP_CBAJ_G0006332.1 mouse_genomes_project 4 58865691 58869561 - 2310081O03Rik lincRNA lincRNA MGP_CBAJ_T0007768.1 MGP_CBAJ_G0006344.1 mouse_genomes_project 4 71818993 71970665 + lincRNA lincRNA MGP_CBAJ_T0014291.1 MGP_CBAJ_G0012403.1 mouse_genomes_project 4 30194961 30195524 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007923.1 MGP_CBAJ_G0006460.1 mouse_genomes_project 4 164211342 164219265 + Gm13067 lincRNA lincRNA MGP_CBAJ_T0067358.1 MGP_CBAJ_G0028434.1 mouse_genomes_project 4 135896339 135898470 + MGP_CBAJ_P0067358 Eva1b protein_coding protein_coding MGP_CBAJ_T0067359.1 MGP_CBAJ_G0028434.1 mouse_genomes_project 4 135896598 135898471 + MGP_CBAJ_P0067359 Eva1b protein_coding protein_coding MGP_CBAJ_T0067360.1 MGP_CBAJ_G0028434.1 mouse_genomes_project 4 135897127 135898461 + MGP_CBAJ_P0067360 Eva1b protein_coding protein_coding MGP_CBAJ_T0014282.1 MGP_CBAJ_G0012394.1 mouse_genomes_project 4 27640392 27640739 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014559.1 MGP_CBAJ_G0012671.1 mouse_genomes_project 4 134740606 134740930 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0066906.1 MGP_CBAJ_G0028315.1 mouse_genomes_project 4 126615794 126623406 - Dmap1 protein_coding processed_transcript MGP_CBAJ_T0066907.1 MGP_CBAJ_G0028315.1 mouse_genomes_project 4 126615794 126623426 - MGP_CBAJ_P0066907 Dmap1 protein_coding protein_coding MGP_CBAJ_T0066908.1 MGP_CBAJ_G0028315.1 mouse_genomes_project 4 126615799 126623136 - Dmap1 protein_coding processed_transcript MGP_CBAJ_T0066909.1 MGP_CBAJ_G0028315.1 mouse_genomes_project 4 126622072 126623374 - Dmap1 protein_coding processed_transcript MGP_CBAJ_T0066910.1 MGP_CBAJ_G0028315.1 mouse_genomes_project 4 126622454 126623364 - Dmap1 protein_coding processed_transcript MGP_CBAJ_T0066911.1 MGP_CBAJ_G0028315.1 mouse_genomes_project 4 126622739 126623424 - Dmap1 protein_coding processed_transcript MGP_CBAJ_T0099286.1 MGP_CBAJ_G0037541.1 mouse_genomes_project 4 116911054 116911161 - Gm25827 snRNA snRNA MGP_CBAJ_T0065861.1 MGP_CBAJ_G0028085.1 mouse_genomes_project 4 94463614 94509817 - MGP_CBAJ_P0065861 Hacd4 protein_coding protein_coding MGP_CBAJ_T0065864.1 MGP_CBAJ_G0028085.1 mouse_genomes_project 4 94481059 94509830 - MGP_CBAJ_P0065864 Hacd4 protein_coding protein_coding MGP_CBAJ_T0065865.1 MGP_CBAJ_G0028085.1 mouse_genomes_project 4 94483649 94509828 - MGP_CBAJ_P0065865 Hacd4 protein_coding protein_coding MGP_CBAJ_T0067609.1 MGP_CBAJ_G0028490.1 mouse_genomes_project 4 139801892 139821101 - MGP_CBAJ_P0067609 Lck protein_coding protein_coding MGP_CBAJ_T0067610.1 MGP_CBAJ_G0028490.1 mouse_genomes_project 4 139801897 139843113 - MGP_CBAJ_P0067610 Lck protein_coding protein_coding MGP_CBAJ_T0067611.1 MGP_CBAJ_G0028490.1 mouse_genomes_project 4 139801897 139821120 - MGP_CBAJ_P0067611 Lck protein_coding protein_coding MGP_CBAJ_T0067612.1 MGP_CBAJ_G0028490.1 mouse_genomes_project 4 139802443 139818586 - Lck protein_coding retained_intron MGP_CBAJ_T0067613.1 MGP_CBAJ_G0028490.1 mouse_genomes_project 4 139805563 139818969 - Lck protein_coding retained_intron MGP_CBAJ_T0067614.1 MGP_CBAJ_G0028490.1 mouse_genomes_project 4 139818213 139819199 - Lck protein_coding retained_intron MGP_CBAJ_T0067615.1 MGP_CBAJ_G0028490.1 mouse_genomes_project 4 139819591 139820816 - Lck protein_coding retained_intron MGP_CBAJ_T0067616.1 MGP_CBAJ_G0028490.1 mouse_genomes_project 4 139820093 139821101 - MGP_CBAJ_P0067616 Lck protein_coding protein_coding MGP_CBAJ_T0067029.1 MGP_CBAJ_G0028348.1 mouse_genomes_project 4 127994873 127995815 - MGP_CBAJ_P0067029 Olfr1329 protein_coding protein_coding MGP_CBAJ_T0064399.1 MGP_CBAJ_G0027756.1 mouse_genomes_project 4 18012271 18043787 + MGP_CBAJ_P0064399 Slc7a13 protein_coding protein_coding MGP_CBAJ_T0007791.1 MGP_CBAJ_G0006363.1 mouse_genomes_project 4 98999248 99019643 + Gm12637 lincRNA lincRNA MGP_CBAJ_T0004484.1 MGP_CBAJ_G0003893.1 mouse_genomes_project 4 153655323 153659804 - Gm13055 antisense antisense MGP_CBAJ_T0004524.1 MGP_CBAJ_G0003923.1 mouse_genomes_project 4 169491597 169494603 + Gm13134 antisense antisense MGP_CBAJ_T0004525.1 MGP_CBAJ_G0003923.1 mouse_genomes_project 4 169491715 169493105 + Gm13134 antisense antisense MGP_CBAJ_T0004363.1 MGP_CBAJ_G0003800.1 mouse_genomes_project 4 46193605 46196934 + Gm12493 antisense antisense MGP_CBAJ_T0065368.1 MGP_CBAJ_G0027970.1 mouse_genomes_project 4 57461913 57536709 + MGP_CBAJ_P0065368 protein_coding protein_coding MGP_CBAJ_T0065369.1 MGP_CBAJ_G0027970.1 mouse_genomes_project 4 57464836 57611937 + MGP_CBAJ_P0065369 protein_coding protein_coding MGP_CBAJ_T0065370.1 MGP_CBAJ_G0027970.1 mouse_genomes_project 4 57539775 57609727 + MGP_CBAJ_P0065370 protein_coding protein_coding MGP_CBAJ_T0065371.1 MGP_CBAJ_G0027970.1 mouse_genomes_project 4 57539889 57609699 + MGP_CBAJ_P0065371 protein_coding protein_coding MGP_CBAJ_T0097814.1 MGP_CBAJ_G0036087.1 mouse_genomes_project 4 62551894 62552366 + pseudogene pseudogene MGP_CBAJ_T0099315.1 MGP_CBAJ_G0037570.1 mouse_genomes_project 4 150556184 150556290 - Gm22961 snRNA snRNA MGP_CBAJ_T0068025.1 MGP_CBAJ_G0028570.1 mouse_genomes_project 4 144995936 145007903 + MGP_CBAJ_P0068025 Zfp683 protein_coding protein_coding MGP_CBAJ_T0067880.1 MGP_CBAJ_G0028537.1 mouse_genomes_project 4 143173460 143196549 + MGP_CBAJ_P0067880 Ptafr protein_coding protein_coding MGP_CBAJ_T0007910.1 MGP_CBAJ_G0006447.1 mouse_genomes_project 4 152610005 152617293 + Gm13021 lincRNA lincRNA MGP_CBAJ_T0065476.1 MGP_CBAJ_G0027998.1 mouse_genomes_project 4 61978742 61985411 + MGP_CBAJ_P0065476 Gng10 protein_coding protein_coding MGP_CBAJ_T0065477.1 MGP_CBAJ_G0027998.1 mouse_genomes_project 4 61979426 61985411 + Gng10 protein_coding processed_transcript MGP_CBAJ_T0066124.1 MGP_CBAJ_G0028161.1 mouse_genomes_project 4 109423970 109427169 - MGP_CBAJ_P0066124 C130073F10Rik protein_coding protein_coding MGP_CBAJ_T0010460.1 MGP_CBAJ_G0008598.1 mouse_genomes_project 4 41393620 41393699 + Mir207 miRNA miRNA MGP_CBAJ_T0067225.1 MGP_CBAJ_G0028401.1 mouse_genomes_project 4 132788859 132819686 + Pabpc4 protein_coding processed_transcript MGP_CBAJ_T0067226.1 MGP_CBAJ_G0028401.1 mouse_genomes_project 4 132815747 132835730 + MGP_CBAJ_P0067226 Pabpc4 protein_coding protein_coding MGP_CBAJ_T0067227.1 MGP_CBAJ_G0028401.1 mouse_genomes_project 4 132815754 132835637 + MGP_CBAJ_P0067227 Pabpc4 protein_coding protein_coding MGP_CBAJ_T0067228.1 MGP_CBAJ_G0028401.1 mouse_genomes_project 4 132815767 132835627 + MGP_CBAJ_P0067228 Pabpc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067229.1 MGP_CBAJ_G0028401.1 mouse_genomes_project 4 132815834 132835637 + MGP_CBAJ_P0067229 Pabpc4 protein_coding protein_coding MGP_CBAJ_T0067230.1 MGP_CBAJ_G0028401.1 mouse_genomes_project 4 132816018 132835637 + MGP_CBAJ_P0067230 Pabpc4 protein_coding protein_coding MGP_CBAJ_T0067231.1 MGP_CBAJ_G0028401.1 mouse_genomes_project 4 132816565 132835335 + MGP_CBAJ_P0067231 Pabpc4 protein_coding unknown_likely_coding MGP_CBAJ_T0067232.1 MGP_CBAJ_G0028401.1 mouse_genomes_project 4 132831768 132834811 + Pabpc4 protein_coding processed_transcript MGP_CBAJ_T0067233.1 MGP_CBAJ_G0028401.1 mouse_genomes_project 4 132833984 132835637 + Pabpc4 protein_coding retained_intron MGP_CBAJ_T0098391.1 MGP_CBAJ_G0036657.1 mouse_genomes_project 4 146691873 146692463 - Gm15979 sense_intronic sense_intronic MGP_CBAJ_T0067896.1 MGP_CBAJ_G0028540.1 mouse_genomes_project 4 143366498 143390939 - MGP_CBAJ_P0067896 Smpdl3b protein_coding protein_coding MGP_CBAJ_T0014443.1 MGP_CBAJ_G0012555.1 mouse_genomes_project 4 96659365 96661070 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0068041.1 MGP_CBAJ_G0028573.1 mouse_genomes_project 4 145056354 145087817 + MGP_CBAJ_P0068041 Ubxn11 protein_coding protein_coding MGP_CBAJ_T0068042.1 MGP_CBAJ_G0028573.1 mouse_genomes_project 4 145056359 145086225 + Ubxn11 protein_coding processed_transcript MGP_CBAJ_T0068043.1 MGP_CBAJ_G0028573.1 mouse_genomes_project 4 145056392 145086834 + Ubxn11 protein_coding processed_transcript MGP_CBAJ_T0068044.1 MGP_CBAJ_G0028573.1 mouse_genomes_project 4 145056404 145087835 + Ubxn11 protein_coding processed_transcript MGP_CBAJ_T0068045.1 MGP_CBAJ_G0028573.1 mouse_genomes_project 4 145056407 145077204 + MGP_CBAJ_P0068045 Ubxn11 protein_coding protein_coding MGP_CBAJ_T0068046.1 MGP_CBAJ_G0028573.1 mouse_genomes_project 4 145056408 145067779 + Ubxn11 protein_coding processed_transcript MGP_CBAJ_T0068047.1 MGP_CBAJ_G0028573.1 mouse_genomes_project 4 145065933 145074016 + Ubxn11 protein_coding processed_transcript MGP_CBAJ_T0068048.1 MGP_CBAJ_G0028573.1 mouse_genomes_project 4 145073596 145084658 + Ubxn11 protein_coding processed_transcript MGP_CBAJ_T0068049.1 MGP_CBAJ_G0028573.1 mouse_genomes_project 4 145084528 145087834 + Ubxn11 protein_coding processed_transcript MGP_CBAJ_T0068050.1 MGP_CBAJ_G0028573.1 mouse_genomes_project 4 145085110 145087560 + MGP_CBAJ_P0068050 Ubxn11 protein_coding protein_coding MGP_CBAJ_T0068051.1 MGP_CBAJ_G0028573.1 mouse_genomes_project 4 145086986 145087835 + Ubxn11 protein_coding processed_transcript MGP_CBAJ_T0014347.1 MGP_CBAJ_G0012459.1 mouse_genomes_project 4 51206014 51208689 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0064512.1 MGP_CBAJ_G0027781.1 mouse_genomes_project 4 32238285 32240402 - MGP_CBAJ_P0064512 Gja10 protein_coding protein_coding MGP_CBAJ_T0014264.1 MGP_CBAJ_G0012376.1 mouse_genomes_project 4 22878972 22880174 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101907.1 MGP_CBAJ_G0039938.1 mouse_genomes_project 4 123552339 123553621 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0066613.1 MGP_CBAJ_G0028253.1 mouse_genomes_project 4 123157428 123196244 + MGP_CBAJ_P0066613 Gm12830 protein_coding protein_coding MGP_CBAJ_T0007719.1 MGP_CBAJ_G0006302.1 mouse_genomes_project 4 28337499 28338557 + Gm11916 lincRNA lincRNA MGP_CBAJ_T0007760.1 MGP_CBAJ_G0006336.1 mouse_genomes_project 4 61553085 61563245 - Gm12580 lincRNA lincRNA MGP_CBAJ_T0014459.1 MGP_CBAJ_G0012571.1 mouse_genomes_project 4 101149270 101149847 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004537.1 MGP_CBAJ_G0003930.1 mouse_genomes_project 4 170901998 170902685 - Mxra8os antisense antisense MGP_CBAJ_T0007879.1 MGP_CBAJ_G0006426.1 mouse_genomes_project 4 142542123 142542907 + Gm13063 lincRNA lincRNA MGP_CBAJ_T0065361.1 MGP_CBAJ_G0027967.1 mouse_genomes_project 4 56132950 56185685 + MGP_CBAJ_P0065361 Fktn protein_coding nonsense_mediated_decay MGP_CBAJ_T0065362.1 MGP_CBAJ_G0027967.1 mouse_genomes_project 4 56133315 56188688 + MGP_CBAJ_P0065362 Fktn protein_coding protein_coding MGP_CBAJ_T0067474.1 MGP_CBAJ_G0028457.1 mouse_genomes_project 4 137167170 137171188 + MGP_CBAJ_P0067474 Smim12 protein_coding protein_coding MGP_CBAJ_T0065552.1 MGP_CBAJ_G0028023.1 mouse_genomes_project 4 65810015 65824510 - Alad protein_coding processed_transcript MGP_CBAJ_T0065553.1 MGP_CBAJ_G0028023.1 mouse_genomes_project 4 65810015 65824547 - MGP_CBAJ_P0065553 Alad protein_coding protein_coding MGP_CBAJ_T0065554.1 MGP_CBAJ_G0028023.1 mouse_genomes_project 4 65810015 65824523 - MGP_CBAJ_P0065554 Alad protein_coding protein_coding MGP_CBAJ_T0100524.1 MGP_CBAJ_G0038779.1 mouse_genomes_project 4 39817017 39817143 + Gm23607 snoRNA snoRNA MGP_CBAJ_T0068703.1 MGP_CBAJ_G0028735.1 mouse_genomes_project 4 156566446 156574414 + MGP_CBAJ_P0068703 protein_coding protein_coding MGP_CBAJ_T0064538.1 MGP_CBAJ_G0027786.1 mouse_genomes_project 4 32700022 32743916 + MGP_CBAJ_P0064538 Rragd protein_coding protein_coding MGP_CBAJ_T0064539.1 MGP_CBAJ_G0027786.1 mouse_genomes_project 4 32700140 32743916 + MGP_CBAJ_P0064539 Rragd protein_coding protein_coding MGP_CBAJ_T0064540.1 MGP_CBAJ_G0027786.1 mouse_genomes_project 4 32700421 32743916 + MGP_CBAJ_P0064540 Rragd protein_coding protein_coding MGP_CBAJ_T0064541.1 MGP_CBAJ_G0027786.1 mouse_genomes_project 4 32723547 32740555 + Rragd protein_coding processed_transcript MGP_CBAJ_T0067570.1 MGP_CBAJ_G0028479.1 mouse_genomes_project 4 139368522 139376856 - MGP_CBAJ_P0067570 C77080 protein_coding protein_coding MGP_CBAJ_T0067571.1 MGP_CBAJ_G0028479.1 mouse_genomes_project 4 139368522 139387978 - MGP_CBAJ_P0067571 C77080 protein_coding protein_coding MGP_CBAJ_T0067572.1 MGP_CBAJ_G0028479.1 mouse_genomes_project 4 139370399 139397019 - MGP_CBAJ_P0067572 C77080 protein_coding protein_coding MGP_CBAJ_T0067573.1 MGP_CBAJ_G0028479.1 mouse_genomes_project 4 139374304 139412934 - MGP_CBAJ_P0067573 C77080 protein_coding protein_coding MGP_CBAJ_T0069213.1 MGP_CBAJ_G0028855.1 mouse_genomes_project 4 168882542 168925746 - MGP_CBAJ_P0069213 Trp73 protein_coding protein_coding MGP_CBAJ_T0069214.1 MGP_CBAJ_G0028855.1 mouse_genomes_project 4 168884801 168925746 - MGP_CBAJ_P0069214 Trp73 protein_coding protein_coding MGP_CBAJ_T0069215.1 MGP_CBAJ_G0028855.1 mouse_genomes_project 4 168885278 168925740 - MGP_CBAJ_P0069215 Trp73 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069216.1 MGP_CBAJ_G0028855.1 mouse_genomes_project 4 168885280 168950561 - MGP_CBAJ_P0069216 Trp73 protein_coding protein_coding MGP_CBAJ_T0069217.1 MGP_CBAJ_G0028855.1 mouse_genomes_project 4 168890484 168913895 - MGP_CBAJ_P0069217 Trp73 protein_coding protein_coding MGP_CBAJ_T0069218.1 MGP_CBAJ_G0028855.1 mouse_genomes_project 4 168893732 168945198 - MGP_CBAJ_P0069218 Trp73 protein_coding protein_coding MGP_CBAJ_T0069009.1 MGP_CBAJ_G0028820.1 mouse_genomes_project 4 165189636 165206240 + MGP_CBAJ_P0069009 Errfi1 protein_coding protein_coding MGP_CBAJ_T0069010.1 MGP_CBAJ_G0028820.1 mouse_genomes_project 4 165190778 165191521 + Errfi1 protein_coding processed_transcript MGP_CBAJ_T0069011.1 MGP_CBAJ_G0028820.1 mouse_genomes_project 4 165190778 165206235 + MGP_CBAJ_P0069011 Errfi1 protein_coding protein_coding MGP_CBAJ_T0064360.1 MGP_CBAJ_G0027739.1 mouse_genomes_project 4 12181620 12360582 - MGP_CBAJ_P0064360 Lrrc69 protein_coding protein_coding MGP_CBAJ_T0064361.1 MGP_CBAJ_G0027739.1 mouse_genomes_project 4 12220916 12320393 - Lrrc69 protein_coding processed_transcript MGP_CBAJ_T0064362.1 MGP_CBAJ_G0027739.1 mouse_genomes_project 4 12220916 12360574 - MGP_CBAJ_P0064362 Lrrc69 protein_coding protein_coding MGP_CBAJ_T0099258.1 MGP_CBAJ_G0037513.1 mouse_genomes_project 4 45186294 45186406 - Gm22706 snRNA snRNA MGP_CBAJ_T0101918.1 MGP_CBAJ_G0039949.1 mouse_genomes_project 4 132179262 132183712 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0065696.1 MGP_CBAJ_G0028060.1 mouse_genomes_project 4 86165572 86171380 + MGP_CBAJ_P0065696 Tyrp1 protein_coding protein_coding MGP_CBAJ_T0065697.1 MGP_CBAJ_G0028060.1 mouse_genomes_project 4 86165679 86185339 + MGP_CBAJ_P0065697 Tyrp1 protein_coding protein_coding MGP_CBAJ_T0065698.1 MGP_CBAJ_G0028060.1 mouse_genomes_project 4 86165756 86185340 + MGP_CBAJ_P0065698 Tyrp1 protein_coding protein_coding MGP_CBAJ_T0065699.1 MGP_CBAJ_G0028060.1 mouse_genomes_project 4 86180227 86184621 + MGP_CBAJ_P0065699 Tyrp1 protein_coding protein_coding MGP_CBAJ_T0065769.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89852411 90271044 - MGP_CBAJ_P0065769 Bnc2 protein_coding protein_coding MGP_CBAJ_T0065770.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89852545 90271077 - MGP_CBAJ_P0065770 Bnc2 protein_coding protein_coding MGP_CBAJ_T0065771.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89852668 90271285 - MGP_CBAJ_P0065771 Bnc2 protein_coding protein_coding MGP_CBAJ_T0065772.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89852696 89869058 - MGP_CBAJ_P0065772 Bnc2 protein_coding protein_coding MGP_CBAJ_T0065773.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89852926 90271096 - MGP_CBAJ_P0065773 Bnc2 protein_coding protein_coding MGP_CBAJ_T0065774.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89853475 89869231 - MGP_CBAJ_P0065774 Bnc2 protein_coding protein_coding MGP_CBAJ_T0065775.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89853561 89869447 - MGP_CBAJ_P0065775 Bnc2 protein_coding protein_coding MGP_CBAJ_T0065776.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89853760 89869169 - MGP_CBAJ_P0065776 Bnc2 protein_coding protein_coding MGP_CBAJ_T0065777.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89853760 89869169 - MGP_CBAJ_P0065777 Bnc2 protein_coding protein_coding MGP_CBAJ_T0065778.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89870514 90271006 - MGP_CBAJ_P0065778 Bnc2 protein_coding protein_coding MGP_CBAJ_T0065779.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89870514 90271006 - MGP_CBAJ_P0065779 Bnc2 protein_coding protein_coding MGP_CBAJ_T0065780.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89870538 90096864 - Bnc2 protein_coding processed_transcript MGP_CBAJ_T0065781.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89870877 90271037 - MGP_CBAJ_P0065781 Bnc2 protein_coding protein_coding MGP_CBAJ_T0065782.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89870904 90271007 - MGP_CBAJ_P0065782 Bnc2 protein_coding protein_coding MGP_CBAJ_T0065783.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89870935 90125862 - Bnc2 protein_coding processed_transcript MGP_CBAJ_T0065784.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89976212 90271009 - Bnc2 protein_coding retained_intron MGP_CBAJ_T0065785.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89978456 90271007 - MGP_CBAJ_P0065785 Bnc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065786.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89978488 90141364 - Bnc2 protein_coding processed_transcript MGP_CBAJ_T0065787.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89978581 90271088 - MGP_CBAJ_P0065787 Bnc2 protein_coding protein_coding MGP_CBAJ_T0065788.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89998687 90141035 - MGP_CBAJ_P0065788 Bnc2 protein_coding protein_coding MGP_CBAJ_T0065789.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 89998712 90114380 - Bnc2 protein_coding processed_transcript MGP_CBAJ_T0065790.1 MGP_CBAJ_G0028071.1 mouse_genomes_project 4 90140956 90271009 - MGP_CBAJ_P0065790 Bnc2 protein_coding protein_coding MGP_CBAJ_T0099323.1 MGP_CBAJ_G0037578.1 mouse_genomes_project 4 164553941 164554051 + Gm23209 snRNA snRNA MGP_CBAJ_T0067648.1 MGP_CBAJ_G0028495.1 mouse_genomes_project 4 139892710 139896635 - MGP_CBAJ_P0067648 protein_coding protein_coding MGP_CBAJ_T0067649.1 MGP_CBAJ_G0028495.1 mouse_genomes_project 4 139893304 139894566 - protein_coding processed_transcript MGP_CBAJ_T0067650.1 MGP_CBAJ_G0028495.1 mouse_genomes_project 4 139894874 139896612 - protein_coding retained_intron MGP_CBAJ_T0067651.1 MGP_CBAJ_G0028495.1 mouse_genomes_project 4 139895633 139896632 - MGP_CBAJ_P0067651 protein_coding protein_coding MGP_CBAJ_T0067652.1 MGP_CBAJ_G0028495.1 mouse_genomes_project 4 139895777 139896616 - protein_coding processed_transcript MGP_CBAJ_T0014341.1 MGP_CBAJ_G0012453.1 mouse_genomes_project 4 48552881 48553244 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068326.1 MGP_CBAJ_G0028646.1 mouse_genomes_project 4 149304174 149306667 - MGP_CBAJ_P0068326 Ldlrad2 protein_coding protein_coding MGP_CBAJ_T0069033.1 MGP_CBAJ_G0028825.1 mouse_genomes_project 4 165367639 165413167 - MGP_CBAJ_P0069033 Per3 protein_coding protein_coding MGP_CBAJ_T0069034.1 MGP_CBAJ_G0028825.1 mouse_genomes_project 4 165367773 165380092 - Per3 protein_coding processed_transcript MGP_CBAJ_T0069035.1 MGP_CBAJ_G0028825.1 mouse_genomes_project 4 165375405 165395453 - Per3 protein_coding retained_intron MGP_CBAJ_T0069036.1 MGP_CBAJ_G0028825.1 mouse_genomes_project 4 165375405 165413167 - MGP_CBAJ_P0069036 Per3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069037.1 MGP_CBAJ_G0028825.1 mouse_genomes_project 4 165388135 165413167 - Per3 protein_coding retained_intron MGP_CBAJ_T0014219.1 MGP_CBAJ_G0012331.1 mouse_genomes_project 4 8990090 8990943 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099310.1 MGP_CBAJ_G0037565.1 mouse_genomes_project 4 144685345 144685493 - Gm25270 snRNA snRNA MGP_CBAJ_T0100591.1 MGP_CBAJ_G0038846.1 mouse_genomes_project 4 142923362 142923567 - Snora73a snoRNA snoRNA MGP_CBAJ_T0064168.1 MGP_CBAJ_G0027702.1 mouse_genomes_project 4 470231 474872 + MGP_CBAJ_P0064168 Chchd7 protein_coding protein_coding MGP_CBAJ_T0064169.1 MGP_CBAJ_G0027702.1 mouse_genomes_project 4 470231 474867 + MGP_CBAJ_P0064169 Chchd7 protein_coding protein_coding MGP_CBAJ_T0064170.1 MGP_CBAJ_G0027702.1 mouse_genomes_project 4 470233 474816 + MGP_CBAJ_P0064170 Chchd7 protein_coding protein_coding MGP_CBAJ_T0064171.1 MGP_CBAJ_G0027702.1 mouse_genomes_project 4 470257 474865 + MGP_CBAJ_P0064171 Chchd7 protein_coding protein_coding MGP_CBAJ_T0064172.1 MGP_CBAJ_G0027702.1 mouse_genomes_project 4 470257 482384 + MGP_CBAJ_P0064172 Chchd7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064173.1 MGP_CBAJ_G0027702.1 mouse_genomes_project 4 470257 474872 + MGP_CBAJ_P0064173 Chchd7 protein_coding protein_coding MGP_CBAJ_T0064174.1 MGP_CBAJ_G0027702.1 mouse_genomes_project 4 470257 474872 + MGP_CBAJ_P0064174 Chchd7 protein_coding protein_coding MGP_CBAJ_T0064175.1 MGP_CBAJ_G0027702.1 mouse_genomes_project 4 470257 474394 + MGP_CBAJ_P0064175 Chchd7 protein_coding protein_coding MGP_CBAJ_T0064176.1 MGP_CBAJ_G0027702.1 mouse_genomes_project 4 470263 474848 + MGP_CBAJ_P0064176 Chchd7 protein_coding protein_coding MGP_CBAJ_T0064177.1 MGP_CBAJ_G0027702.1 mouse_genomes_project 4 470386 474750 + MGP_CBAJ_P0064177 Chchd7 protein_coding protein_coding MGP_CBAJ_T0064178.1 MGP_CBAJ_G0027702.1 mouse_genomes_project 4 470765 472763 + Chchd7 protein_coding retained_intron MGP_CBAJ_T0064179.1 MGP_CBAJ_G0027702.1 mouse_genomes_project 4 470843 474870 + MGP_CBAJ_P0064179 Chchd7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064180.1 MGP_CBAJ_G0027702.1 mouse_genomes_project 4 472197 474869 + MGP_CBAJ_P0064180 Chchd7 protein_coding protein_coding MGP_CBAJ_T0064181.1 MGP_CBAJ_G0027702.1 mouse_genomes_project 4 474757 481549 + Chchd7 protein_coding processed_transcript MGP_CBAJ_T0064182.1 MGP_CBAJ_G0027702.1 mouse_genomes_project 4 478145 481210 + Chchd7 protein_coding retained_intron MGP_CBAJ_T0066057.1 MGP_CBAJ_G0028142.1 mouse_genomes_project 4 106360076 106431355 + MGP_CBAJ_P0066057 Atg4c protein_coding protein_coding MGP_CBAJ_T0066058.1 MGP_CBAJ_G0028142.1 mouse_genomes_project 4 106360289 106431351 + MGP_CBAJ_P0066058 Atg4c protein_coding protein_coding MGP_CBAJ_T0066059.1 MGP_CBAJ_G0028142.1 mouse_genomes_project 4 106386784 106395627 + Atg4c protein_coding processed_transcript MGP_CBAJ_T0065434.1 MGP_CBAJ_G0027988.1 mouse_genomes_project 4 60822524 60848312 - Txndc8 protein_coding processed_transcript MGP_CBAJ_T0065435.1 MGP_CBAJ_G0027988.1 mouse_genomes_project 4 60822524 60848411 - MGP_CBAJ_P0065435 Txndc8 protein_coding protein_coding MGP_CBAJ_T0065436.1 MGP_CBAJ_G0027988.1 mouse_genomes_project 4 60822526 60838808 - MGP_CBAJ_P0065436 Txndc8 protein_coding protein_coding MGP_CBAJ_T0065867.1 MGP_CBAJ_G0028087.1 mouse_genomes_project 4 94637976 94638549 - MGP_CBAJ_P0065867 Ifna15 protein_coding protein_coding MGP_CBAJ_T0007783.1 MGP_CBAJ_G0006357.1 mouse_genomes_project 4 93254731 93257640 + Gm12600 lincRNA lincRNA MGP_CBAJ_T0065437.1 MGP_CBAJ_G0027989.1 mouse_genomes_project 4 60878984 61062961 - MGP_CBAJ_P0065437 Svep1 protein_coding protein_coding MGP_CBAJ_T0065438.1 MGP_CBAJ_G0027989.1 mouse_genomes_project 4 60989439 61062977 - Svep1 protein_coding processed_transcript MGP_CBAJ_T0065439.1 MGP_CBAJ_G0027989.1 mouse_genomes_project 4 60990800 61063224 - Svep1 protein_coding processed_transcript MGP_CBAJ_T0065440.1 MGP_CBAJ_G0027989.1 mouse_genomes_project 4 61031027 61063053 - Svep1 protein_coding processed_transcript MGP_CBAJ_T0101889.1 MGP_CBAJ_G0039920.1 mouse_genomes_project 4 78238604 78239300 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0068323.1 MGP_CBAJ_G0028645.1 mouse_genomes_project 4 149181133 149302725 + MGP_CBAJ_P0068323 Hspg2 protein_coding protein_coding MGP_CBAJ_T0068324.1 MGP_CBAJ_G0028645.1 mouse_genomes_project 4 149181167 149302724 + MGP_CBAJ_P0068324 Hspg2 protein_coding protein_coding MGP_CBAJ_T0068325.1 MGP_CBAJ_G0028645.1 mouse_genomes_project 4 149301248 149302202 + Hspg2 protein_coding processed_transcript MGP_CBAJ_T0007932.1 MGP_CBAJ_G0006469.1 mouse_genomes_project 4 169751611 169753131 + lincRNA lincRNA MGP_CBAJ_T0011445.1 MGP_CBAJ_G0009583.1 mouse_genomes_project 4 95659976 95660125 + Gm27580 misc_RNA misc_RNA MGP_CBAJ_T0007833.1 MGP_CBAJ_G0006396.1 mouse_genomes_project 4 128090698 128091524 - Gm12862 lincRNA lincRNA MGP_CBAJ_T0098048.1 MGP_CBAJ_G0036321.1 mouse_genomes_project 4 120103133 120103249 - n-R5s191 rRNA rRNA MGP_CBAJ_T0007708.1 MGP_CBAJ_G0006292.1 mouse_genomes_project 4 14242326 14300521 + Gm11861 lincRNA lincRNA MGP_CBAJ_T0014607.1 MGP_CBAJ_G0012719.1 mouse_genomes_project 4 157988753 157989463 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100545.1 MGP_CBAJ_G0038800.1 mouse_genomes_project 4 66158290 66158423 + Gm24117 snoRNA snoRNA MGP_CBAJ_T0065471.1 MGP_CBAJ_G0027996.1 mouse_genomes_project 4 61935777 61962344 + MGP_CBAJ_P0065471 Dnajc25 protein_coding protein_coding MGP_CBAJ_T0065472.1 MGP_CBAJ_G0027996.1 mouse_genomes_project 4 61945461 61967753 + MGP_CBAJ_P0065472 Dnajc25 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065473.1 MGP_CBAJ_G0027996.1 mouse_genomes_project 4 61945472 61967753 + MGP_CBAJ_P0065473 Dnajc25 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065475.1 MGP_CBAJ_G0027996.1 mouse_genomes_project 4 61945510 61964815 + MGP_CBAJ_P0065475 Dnajc25 protein_coding protein_coding MGP_CBAJ_T0014442.1 MGP_CBAJ_G0012554.1 mouse_genomes_project 4 95656974 95659402 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065878.1 MGP_CBAJ_G0028094.1 mouse_genomes_project 4 94776380 94778143 - MGP_CBAJ_P0065878 Ifnab protein_coding protein_coding MGP_CBAJ_T0010498.1 MGP_CBAJ_G0008636.1 mouse_genomes_project 4 136351378 136351437 + Mir7119 miRNA miRNA MGP_CBAJ_T0011435.1 MGP_CBAJ_G0009573.1 mouse_genomes_project 4 47494132 47494399 + Gm23250 misc_RNA misc_RNA MGP_CBAJ_T0010493.1 MGP_CBAJ_G0008631.1 mouse_genomes_project 4 130099514 130099606 + Mir30f miRNA miRNA MGP_CBAJ_T0069268.1 MGP_CBAJ_G0028866.1 mouse_genomes_project 4 169836652 169842642 - MGP_CBAJ_P0069268 Tnfrsf14 protein_coding protein_coding MGP_CBAJ_T0069269.1 MGP_CBAJ_G0028866.1 mouse_genomes_project 4 169836652 169842517 - MGP_CBAJ_P0069269 Tnfrsf14 protein_coding protein_coding MGP_CBAJ_T0069270.1 MGP_CBAJ_G0028866.1 mouse_genomes_project 4 169836686 169842486 - MGP_CBAJ_P0069270 Tnfrsf14 protein_coding unknown_likely_coding MGP_CBAJ_T0069271.1 MGP_CBAJ_G0028866.1 mouse_genomes_project 4 169836703 169842992 - MGP_CBAJ_P0069271 Tnfrsf14 protein_coding protein_coding MGP_CBAJ_T0069272.1 MGP_CBAJ_G0028866.1 mouse_genomes_project 4 169838913 169842992 - Tnfrsf14 protein_coding processed_transcript MGP_CBAJ_T0069273.1 MGP_CBAJ_G0028866.1 mouse_genomes_project 4 169841067 169843003 - Tnfrsf14 protein_coding processed_transcript MGP_CBAJ_T0067154.1 MGP_CBAJ_G0028379.1 mouse_genomes_project 4 130077030 130117334 - MGP_CBAJ_P0067154 Nfyc protein_coding protein_coding MGP_CBAJ_T0067155.1 MGP_CBAJ_G0028379.1 mouse_genomes_project 4 130085226 130092340 - Nfyc protein_coding processed_transcript MGP_CBAJ_T0067156.1 MGP_CBAJ_G0028379.1 mouse_genomes_project 4 130088597 130095126 - Nfyc protein_coding processed_transcript MGP_CBAJ_T0067157.1 MGP_CBAJ_G0028379.1 mouse_genomes_project 4 130092163 130155051 - MGP_CBAJ_P0067157 Nfyc protein_coding protein_coding MGP_CBAJ_T0067158.1 MGP_CBAJ_G0028379.1 mouse_genomes_project 4 130095787 130155063 - MGP_CBAJ_P0067158 Nfyc protein_coding protein_coding MGP_CBAJ_T0067159.1 MGP_CBAJ_G0028379.1 mouse_genomes_project 4 130106023 130155074 - MGP_CBAJ_P0067159 Nfyc protein_coding protein_coding MGP_CBAJ_T0004517.1 MGP_CBAJ_G0003916.1 mouse_genomes_project 4 164835695 164837338 - Gm13091 antisense antisense MGP_CBAJ_T0065739.1 MGP_CBAJ_G0028067.1 mouse_genomes_project 4 88750334 88870361 - MGP_CBAJ_P0065739 Ttc39b protein_coding protein_coding MGP_CBAJ_T0065740.1 MGP_CBAJ_G0028067.1 mouse_genomes_project 4 88754824 88821965 - MGP_CBAJ_P0065740 Ttc39b protein_coding unknown_likely_coding MGP_CBAJ_T0065741.1 MGP_CBAJ_G0028067.1 mouse_genomes_project 4 88756458 88763210 - Ttc39b protein_coding retained_intron MGP_CBAJ_T0065742.1 MGP_CBAJ_G0028067.1 mouse_genomes_project 4 88769811 88870345 - MGP_CBAJ_P0065742 Ttc39b protein_coding protein_coding MGP_CBAJ_T0065743.1 MGP_CBAJ_G0028067.1 mouse_genomes_project 4 88777491 88800429 - Ttc39b protein_coding processed_transcript MGP_CBAJ_T0065744.1 MGP_CBAJ_G0028067.1 mouse_genomes_project 4 88782867 88822043 - MGP_CBAJ_P0065744 Ttc39b protein_coding protein_coding MGP_CBAJ_T0065745.1 MGP_CBAJ_G0028067.1 mouse_genomes_project 4 88791283 88870295 - MGP_CBAJ_P0065745 Ttc39b protein_coding protein_coding MGP_CBAJ_T0065746.1 MGP_CBAJ_G0028067.1 mouse_genomes_project 4 88791414 88816326 - MGP_CBAJ_P0065746 Ttc39b protein_coding protein_coding MGP_CBAJ_T0068140.1 MGP_CBAJ_G0028597.1 mouse_genomes_project 4 145963088 146002708 + MGP_CBAJ_P0068140 Rhd protein_coding protein_coding MGP_CBAJ_T0068141.1 MGP_CBAJ_G0028597.1 mouse_genomes_project 4 145984295 145996900 + Rhd protein_coding retained_intron MGP_CBAJ_T0065532.1 MGP_CBAJ_G0028017.1 mouse_genomes_project 4 65692907 65711054 + MGP_CBAJ_P0065532 Prpf4 protein_coding protein_coding MGP_CBAJ_T0065533.1 MGP_CBAJ_G0028017.1 mouse_genomes_project 4 65705907 65707395 + Prpf4 protein_coding processed_transcript MGP_CBAJ_T0011692.1 MGP_CBAJ_G0009817.1 mouse_genomes_project 4 150860649 150863970 + MGP_CBAJ_P0011692 Pla2g2a polymorphic_pseudogene protein_coding MGP_CBAJ_T0011693.1 MGP_CBAJ_G0009817.1 mouse_genomes_project 4 150860652 150863973 + MGP_CBAJ_P0011693 Pla2g2a polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0011694.1 MGP_CBAJ_G0009817.1 mouse_genomes_project 4 150860668 150862661 + Pla2g2a polymorphic_pseudogene processed_transcript MGP_CBAJ_T0011695.1 MGP_CBAJ_G0009817.1 mouse_genomes_project 4 150862050 150863973 + Pla2g2a polymorphic_pseudogene retained_intron MGP_CBAJ_T0066663.1 MGP_CBAJ_G0028270.1 mouse_genomes_project 4 124438639 124439824 - MGP_CBAJ_P0066663 Tex38 protein_coding protein_coding MGP_CBAJ_T0014590.1 MGP_CBAJ_G0012702.1 mouse_genomes_project 4 147713397 147713920 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010459.1 MGP_CBAJ_G0008597.1 mouse_genomes_project 4 36823014 36823091 - Mir873a miRNA miRNA MGP_CBAJ_T0069499.1 MGP_CBAJ_G0028909.1 mouse_genomes_project 4 171128420 171147060 - MGP_CBAJ_P0069499 Ttll10 protein_coding protein_coding MGP_CBAJ_T0069500.1 MGP_CBAJ_G0028909.1 mouse_genomes_project 4 171128493 171155670 - MGP_CBAJ_P0069500 Ttll10 protein_coding protein_coding MGP_CBAJ_T0069501.1 MGP_CBAJ_G0028909.1 mouse_genomes_project 4 171128862 171146708 - MGP_CBAJ_P0069501 Ttll10 protein_coding protein_coding MGP_CBAJ_T0069502.1 MGP_CBAJ_G0028909.1 mouse_genomes_project 4 171129367 171140230 - Ttll10 protein_coding processed_transcript MGP_CBAJ_T0069503.1 MGP_CBAJ_G0028909.1 mouse_genomes_project 4 171138572 171155600 - Ttll10 protein_coding retained_intron MGP_CBAJ_T0069504.1 MGP_CBAJ_G0028909.1 mouse_genomes_project 4 171139305 171141090 - Ttll10 protein_coding processed_transcript MGP_CBAJ_T0069505.1 MGP_CBAJ_G0028909.1 mouse_genomes_project 4 171139315 171144215 - Ttll10 protein_coding processed_transcript MGP_CBAJ_T0069506.1 MGP_CBAJ_G0028909.1 mouse_genomes_project 4 171143029 171144183 - Ttll10 protein_coding retained_intron MGP_CBAJ_T0067426.1 MGP_CBAJ_G0028448.1 mouse_genomes_project 4 136537029 136559619 - MGP_CBAJ_P0067426 Tfap2e protein_coding protein_coding MGP_CBAJ_T0011431.1 MGP_CBAJ_G0009569.1 mouse_genomes_project 4 32150887 32151154 + Gm24371 misc_RNA misc_RNA MGP_CBAJ_T0069399.1 MGP_CBAJ_G0028888.1 mouse_genomes_project 4 170779798 170785165 + MGP_CBAJ_P0069399 Tmem240 protein_coding protein_coding MGP_CBAJ_T0069400.1 MGP_CBAJ_G0028888.1 mouse_genomes_project 4 170779802 170785587 + Tmem240 protein_coding retained_intron MGP_CBAJ_T0069401.1 MGP_CBAJ_G0028888.1 mouse_genomes_project 4 170779872 170785587 + MGP_CBAJ_P0069401 Tmem240 protein_coding protein_coding MGP_CBAJ_T0066461.1 MGP_CBAJ_G0028225.1 mouse_genomes_project 4 117125376 117195265 + MGP_CBAJ_P0066461 3110021N24Rik protein_coding protein_coding MGP_CBAJ_T0067975.1 MGP_CBAJ_G0028561.1 mouse_genomes_project 4 144401714 144411412 + MGP_CBAJ_P0067975 Gpatch3 protein_coding protein_coding MGP_CBAJ_T0067976.1 MGP_CBAJ_G0028561.1 mouse_genomes_project 4 144406627 144410160 + Gpatch3 protein_coding processed_transcript MGP_CBAJ_T0068452.1 MGP_CBAJ_G0028672.1 mouse_genomes_project 4 151150445 151167580 - MGP_CBAJ_P0068452 Nbl1 protein_coding protein_coding MGP_CBAJ_T0068453.1 MGP_CBAJ_G0028672.1 mouse_genomes_project 4 151151368 151166692 - Nbl1 protein_coding processed_transcript MGP_CBAJ_T0068454.1 MGP_CBAJ_G0028672.1 mouse_genomes_project 4 151166661 151167555 - Nbl1 protein_coding processed_transcript MGP_CBAJ_T0065534.1 MGP_CBAJ_G0028018.1 mouse_genomes_project 4 65711603 65719283 - MGP_CBAJ_P0065534 Rnf183 protein_coding protein_coding MGP_CBAJ_T0065535.1 MGP_CBAJ_G0028018.1 mouse_genomes_project 4 65711605 65718757 - MGP_CBAJ_P0065535 Rnf183 protein_coding protein_coding MGP_CBAJ_T0065536.1 MGP_CBAJ_G0028018.1 mouse_genomes_project 4 65712050 65712623 - MGP_CBAJ_P0065536 Rnf183 protein_coding protein_coding MGP_CBAJ_T0004344.1 MGP_CBAJ_G0003784.1 mouse_genomes_project 4 18194543 18201939 - 4930480G23Rik antisense antisense MGP_CBAJ_T0004375.1 MGP_CBAJ_G0003810.1 mouse_genomes_project 4 62932834 62937771 - Gm12542 antisense antisense MGP_CBAJ_T0017802.1 MGP_CBAJ_G0015295.1 mouse_genomes_project 4 91223352 91523975 + processed_transcript processed_transcript MGP_CBAJ_T0066224.1 MGP_CBAJ_G0028186.1 mouse_genomes_project 4 114674627 114706950 - MGP_CBAJ_P0066224 Lexm protein_coding protein_coding MGP_CBAJ_T0066225.1 MGP_CBAJ_G0028186.1 mouse_genomes_project 4 114674627 114706953 - MGP_CBAJ_P0066225 Lexm protein_coding nonsense_mediated_decay MGP_CBAJ_T0066226.1 MGP_CBAJ_G0028186.1 mouse_genomes_project 4 114674627 114693450 - MGP_CBAJ_P0066226 Lexm protein_coding nonsense_mediated_decay MGP_CBAJ_T0066227.1 MGP_CBAJ_G0028186.1 mouse_genomes_project 4 114675028 114706950 - MGP_CBAJ_P0066227 Lexm protein_coding protein_coding MGP_CBAJ_T0007930.1 MGP_CBAJ_G0006467.1 mouse_genomes_project 4 168722069 168723350 + Gm13115 lincRNA lincRNA MGP_CBAJ_T0067191.1 MGP_CBAJ_G0028392.1 mouse_genomes_project 4 132321846 132349497 - MGP_CBAJ_P0067191 Cap1 protein_coding protein_coding MGP_CBAJ_T0067192.1 MGP_CBAJ_G0028392.1 mouse_genomes_project 4 132321846 132349630 - MGP_CBAJ_P0067192 Cap1 protein_coding protein_coding MGP_CBAJ_T0067193.1 MGP_CBAJ_G0028392.1 mouse_genomes_project 4 132321846 132349642 - MGP_CBAJ_P0067193 Cap1 protein_coding protein_coding MGP_CBAJ_T0067194.1 MGP_CBAJ_G0028392.1 mouse_genomes_project 4 132324687 132326902 - Cap1 protein_coding processed_transcript MGP_CBAJ_T0067195.1 MGP_CBAJ_G0028392.1 mouse_genomes_project 4 132329601 132349551 - MGP_CBAJ_P0067195 Cap1 protein_coding protein_coding MGP_CBAJ_T0067196.1 MGP_CBAJ_G0028392.1 mouse_genomes_project 4 132332949 132349446 - Cap1 protein_coding processed_transcript MGP_CBAJ_T0067197.1 MGP_CBAJ_G0028392.1 mouse_genomes_project 4 132334040 132349450 - Cap1 protein_coding processed_transcript MGP_CBAJ_T0014350.1 MGP_CBAJ_G0012462.1 mouse_genomes_project 4 54074361 54075600 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014299.1 MGP_CBAJ_G0012411.1 mouse_genomes_project 4 32720501 32720828 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065427.1 MGP_CBAJ_G0027985.1 mouse_genomes_project 4 60550029 60686302 + protein_coding processed_transcript MGP_CBAJ_T0065428.1 MGP_CBAJ_G0027985.1 mouse_genomes_project 4 60584570 60729786 + MGP_CBAJ_P0065428 protein_coding protein_coding MGP_CBAJ_T0065429.1 MGP_CBAJ_G0027985.1 mouse_genomes_project 4 60613951 60684582 + MGP_CBAJ_P0065429 protein_coding protein_coding MGP_CBAJ_T0065430.1 MGP_CBAJ_G0027985.1 mouse_genomes_project 4 60658819 60684429 + MGP_CBAJ_P0065430 protein_coding protein_coding MGP_CBAJ_T0066913.1 MGP_CBAJ_G0028317.1 mouse_genomes_project 4 126696208 126706946 - MGP_CBAJ_P0066913 Klf17 protein_coding protein_coding MGP_CBAJ_T0014326.1 MGP_CBAJ_G0012438.1 mouse_genomes_project 4 41383925 41384322 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004408.1 MGP_CBAJ_G0003833.1 mouse_genomes_project 4 114670855 114672827 - Gm12744 antisense antisense MGP_CBAJ_T0004468.1 MGP_CBAJ_G0003879.1 mouse_genomes_project 4 146303482 146304347 - Gm16224 antisense antisense MGP_CBAJ_T0004516.1 MGP_CBAJ_G0003915.1 mouse_genomes_project 4 164033051 164037195 + Gm13070 antisense antisense MGP_CBAJ_T0067032.1 MGP_CBAJ_G0028351.1 mouse_genomes_project 4 128051813 128059116 + MGP_CBAJ_P0067032 Lao1 protein_coding protein_coding MGP_CBAJ_T0067033.1 MGP_CBAJ_G0028351.1 mouse_genomes_project 4 128055599 128058287 + Lao1 protein_coding processed_transcript MGP_CBAJ_T0014472.1 MGP_CBAJ_G0012584.1 mouse_genomes_project 4 106845896 106846602 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007925.1 MGP_CBAJ_G0006462.1 mouse_genomes_project 4 164954733 164977308 - lincRNA lincRNA MGP_CBAJ_T0065214.1 MGP_CBAJ_G0027926.1 mouse_genomes_project 4 47949902 47990835 - MGP_CBAJ_P0065214 Trim14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065215.1 MGP_CBAJ_G0027926.1 mouse_genomes_project 4 47950940 47989127 - Trim14 protein_coding processed_transcript MGP_CBAJ_T0065216.1 MGP_CBAJ_G0027926.1 mouse_genomes_project 4 47966350 47989155 - Trim14 protein_coding processed_transcript MGP_CBAJ_T0065217.1 MGP_CBAJ_G0027926.1 mouse_genomes_project 4 47971564 47990827 - MGP_CBAJ_P0065217 Trim14 protein_coding protein_coding MGP_CBAJ_T0065218.1 MGP_CBAJ_G0027926.1 mouse_genomes_project 4 47978797 47989317 - Trim14 protein_coding processed_transcript MGP_CBAJ_T0066672.1 MGP_CBAJ_G0028273.1 mouse_genomes_project 4 124498612 124541368 + Mknk1 protein_coding processed_transcript MGP_CBAJ_T0066673.1 MGP_CBAJ_G0028273.1 mouse_genomes_project 4 124498612 124541368 + MGP_CBAJ_P0066673 Mknk1 protein_coding protein_coding MGP_CBAJ_T0066674.1 MGP_CBAJ_G0028273.1 mouse_genomes_project 4 124498635 124523991 + MGP_CBAJ_P0066674 Mknk1 protein_coding protein_coding MGP_CBAJ_T0066675.1 MGP_CBAJ_G0028273.1 mouse_genomes_project 4 124498637 124535988 + Mknk1 protein_coding processed_transcript MGP_CBAJ_T0066676.1 MGP_CBAJ_G0028273.1 mouse_genomes_project 4 124498647 124507996 + Mknk1 protein_coding processed_transcript MGP_CBAJ_T0066677.1 MGP_CBAJ_G0028273.1 mouse_genomes_project 4 124498647 124541368 + MGP_CBAJ_P0066677 Mknk1 protein_coding protein_coding MGP_CBAJ_T0066678.1 MGP_CBAJ_G0028273.1 mouse_genomes_project 4 124498649 124525958 + MGP_CBAJ_P0066678 Mknk1 protein_coding protein_coding MGP_CBAJ_T0066679.1 MGP_CBAJ_G0028273.1 mouse_genomes_project 4 124498654 124524028 + MGP_CBAJ_P0066679 Mknk1 protein_coding protein_coding MGP_CBAJ_T0066680.1 MGP_CBAJ_G0028273.1 mouse_genomes_project 4 124498658 124516522 + MGP_CBAJ_P0066680 Mknk1 protein_coding protein_coding MGP_CBAJ_T0066681.1 MGP_CBAJ_G0028273.1 mouse_genomes_project 4 124498674 124522687 + Mknk1 protein_coding processed_transcript MGP_CBAJ_T0066682.1 MGP_CBAJ_G0028273.1 mouse_genomes_project 4 124516456 124540782 + Mknk1 protein_coding processed_transcript MGP_CBAJ_T0066683.1 MGP_CBAJ_G0028273.1 mouse_genomes_project 4 124516530 124538728 + Mknk1 protein_coding processed_transcript MGP_CBAJ_T0066684.1 MGP_CBAJ_G0028273.1 mouse_genomes_project 4 124525692 124526753 + Mknk1 protein_coding processed_transcript MGP_CBAJ_T0066685.1 MGP_CBAJ_G0028273.1 mouse_genomes_project 4 124536888 124539170 + Mknk1 protein_coding processed_transcript MGP_CBAJ_T0067822.1 MGP_CBAJ_G0028525.1 mouse_genomes_project 4 142620884 142663338 - MGP_CBAJ_P0067822 Oprd1 protein_coding protein_coding MGP_CBAJ_T0064562.1 MGP_CBAJ_G0027794.1 mouse_genomes_project 4 33776374 33787059 + Cnr1 protein_coding processed_transcript MGP_CBAJ_T0064563.1 MGP_CBAJ_G0027794.1 mouse_genomes_project 4 33776413 33800583 + MGP_CBAJ_P0064563 Cnr1 protein_coding protein_coding MGP_CBAJ_T0064564.1 MGP_CBAJ_G0027794.1 mouse_genomes_project 4 33777983 33800571 + MGP_CBAJ_P0064564 Cnr1 protein_coding protein_coding MGP_CBAJ_T0068450.1 MGP_CBAJ_G0028671.1 mouse_genomes_project 4 151121192 151135563 - MGP_CBAJ_P0068450 Htr6 protein_coding protein_coding MGP_CBAJ_T0068451.1 MGP_CBAJ_G0028671.1 mouse_genomes_project 4 151121493 151134782 - MGP_CBAJ_P0068451 Htr6 protein_coding protein_coding MGP_CBAJ_T0068097.1 MGP_CBAJ_G0028586.1 mouse_genomes_project 4 145349493 145359016 + MGP_CBAJ_P0068097 Slc30a2 protein_coding protein_coding MGP_CBAJ_T0068098.1 MGP_CBAJ_G0028586.1 mouse_genomes_project 4 145349598 145358876 + MGP_CBAJ_P0068098 Slc30a2 protein_coding protein_coding MGP_CBAJ_T0065299.1 MGP_CBAJ_G0027949.1 mouse_genomes_project 4 51411506 51443962 + MGP_CBAJ_P0065299 Zfp189 protein_coding protein_coding MGP_CBAJ_T0065300.1 MGP_CBAJ_G0027949.1 mouse_genomes_project 4 51411547 51443962 + MGP_CBAJ_P0065300 Zfp189 protein_coding protein_coding MGP_CBAJ_T0007823.1 MGP_CBAJ_G0006387.1 mouse_genomes_project 4 116014387 116020817 + 4933424M12Rik lincRNA lincRNA MGP_CBAJ_T0007824.1 MGP_CBAJ_G0006387.1 mouse_genomes_project 4 116018512 116020817 + 4933424M12Rik lincRNA lincRNA MGP_CBAJ_T0100525.1 MGP_CBAJ_G0038780.1 mouse_genomes_project 4 41110860 41110955 - Gm23338 snoRNA snoRNA MGP_CBAJ_T0004500.1 MGP_CBAJ_G0003904.1 mouse_genomes_project 4 161806307 161807928 - antisense antisense MGP_CBAJ_T0004501.1 MGP_CBAJ_G0003904.1 mouse_genomes_project 4 161806522 161813345 - antisense antisense MGP_CBAJ_T0065381.1 MGP_CBAJ_G0027975.1 mouse_genomes_project 4 59466379 59467892 + MGP_CBAJ_P0065381 Actl7a protein_coding protein_coding MGP_CBAJ_T0014396.1 MGP_CBAJ_G0012508.1 mouse_genomes_project 4 75833422 75835140 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100559.1 MGP_CBAJ_G0038814.1 mouse_genomes_project 4 97351092 97351224 - Gm25244 snoRNA snoRNA MGP_CBAJ_T0069126.1 MGP_CBAJ_G0028841.1 mouse_genomes_project 4 166838689 166840313 - MGP_CBAJ_P0069126 Hes3 protein_coding protein_coding MGP_CBAJ_T0066364.1 MGP_CBAJ_G0028208.1 mouse_genomes_project 4 116115069 116122875 + MGP_CBAJ_P0066364 Magoh protein_coding protein_coding MGP_CBAJ_T0066365.1 MGP_CBAJ_G0028208.1 mouse_genomes_project 4 116118300 116122838 + Magoh protein_coding processed_transcript MGP_CBAJ_T0004493.1 MGP_CBAJ_G0003900.1 mouse_genomes_project 4 154704809 154711539 + antisense antisense MGP_CBAJ_T0004494.1 MGP_CBAJ_G0003900.1 mouse_genomes_project 4 154705135 154711595 + antisense antisense MGP_CBAJ_T0004495.1 MGP_CBAJ_G0003900.1 mouse_genomes_project 4 154705177 154711532 + antisense antisense MGP_CBAJ_T0004496.1 MGP_CBAJ_G0003900.1 mouse_genomes_project 4 154705693 154711573 + antisense antisense MGP_CBAJ_T0067152.1 MGP_CBAJ_G0028378.1 mouse_genomes_project 4 130007437 130064214 - MGP_CBAJ_P0067152 Kcnq4 protein_coding protein_coding MGP_CBAJ_T0067153.1 MGP_CBAJ_G0028378.1 mouse_genomes_project 4 130028522 130073096 - Kcnq4 protein_coding processed_transcript MGP_CBAJ_T0065854.1 MGP_CBAJ_G0028084.1 mouse_genomes_project 4 94138462 94166335 + Focad protein_coding retained_intron MGP_CBAJ_T0065855.1 MGP_CBAJ_G0028084.1 mouse_genomes_project 4 94138463 94481725 + MGP_CBAJ_P0065855 Focad protein_coding protein_coding MGP_CBAJ_T0065856.1 MGP_CBAJ_G0028084.1 mouse_genomes_project 4 94138478 94235204 + Focad protein_coding retained_intron MGP_CBAJ_T0065857.1 MGP_CBAJ_G0028084.1 mouse_genomes_project 4 94165821 94481723 + MGP_CBAJ_P0065857 Focad protein_coding protein_coding MGP_CBAJ_T0065858.1 MGP_CBAJ_G0028084.1 mouse_genomes_project 4 94168956 94200848 + Focad protein_coding retained_intron MGP_CBAJ_T0065859.1 MGP_CBAJ_G0028084.1 mouse_genomes_project 4 94374839 94405108 + Focad protein_coding retained_intron MGP_CBAJ_T0065860.1 MGP_CBAJ_G0028084.1 mouse_genomes_project 4 94424301 94481728 + Focad protein_coding retained_intron MGP_CBAJ_T0065862.1 MGP_CBAJ_G0028084.1 mouse_genomes_project 4 94469289 94477937 + Focad protein_coding processed_transcript MGP_CBAJ_T0065863.1 MGP_CBAJ_G0028084.1 mouse_genomes_project 4 94469504 94481730 + MGP_CBAJ_P0065863 Focad protein_coding protein_coding MGP_CBAJ_T0068279.1 MGP_CBAJ_G0028628.1 mouse_genomes_project 4 147867398 147924793 + MGP_CBAJ_P0068279 Htr1d protein_coding protein_coding MGP_CBAJ_T0068280.1 MGP_CBAJ_G0028628.1 mouse_genomes_project 4 147867400 147924154 + MGP_CBAJ_P0068280 Htr1d protein_coding protein_coding MGP_CBAJ_T0068281.1 MGP_CBAJ_G0028628.1 mouse_genomes_project 4 147867404 147924154 + MGP_CBAJ_P0068281 Htr1d protein_coding protein_coding MGP_CBAJ_T0068282.1 MGP_CBAJ_G0028628.1 mouse_genomes_project 4 147868470 147922370 + Htr1d protein_coding processed_transcript MGP_CBAJ_T0004382.1 MGP_CBAJ_G0003817.1 mouse_genomes_project 4 87976804 88017798 + Gm11266 antisense antisense MGP_CBAJ_T0014342.1 MGP_CBAJ_G0012454.1 mouse_genomes_project 4 48703363 48703498 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0067974.1 MGP_CBAJ_G0028560.1 mouse_genomes_project 4 144376916 144380048 + MGP_CBAJ_P0067974 Nr0b2 protein_coding protein_coding MGP_CBAJ_T0007882.1 MGP_CBAJ_G0006429.1 mouse_genomes_project 4 142876217 142878562 + Snhg12 lincRNA lincRNA MGP_CBAJ_T0007883.1 MGP_CBAJ_G0006429.1 mouse_genomes_project 4 142876217 142878564 + Snhg12 lincRNA lincRNA MGP_CBAJ_T0007884.1 MGP_CBAJ_G0006429.1 mouse_genomes_project 4 142876217 142877511 + Snhg12 lincRNA lincRNA MGP_CBAJ_T0007885.1 MGP_CBAJ_G0006429.1 mouse_genomes_project 4 142876232 142878299 + Snhg12 lincRNA lincRNA MGP_CBAJ_T0007886.1 MGP_CBAJ_G0006429.1 mouse_genomes_project 4 142877168 142878564 + Snhg12 lincRNA lincRNA MGP_CBAJ_T0007887.1 MGP_CBAJ_G0006429.1 mouse_genomes_project 4 142877357 142878535 + Snhg12 lincRNA lincRNA MGP_CBAJ_T0007888.1 MGP_CBAJ_G0006429.1 mouse_genomes_project 4 142877726 142878564 + Snhg12 lincRNA lincRNA MGP_CBAJ_T0064313.1 MGP_CBAJ_G0027728.1 mouse_genomes_project 4 8879674 8920973 + Rad54b protein_coding processed_transcript MGP_CBAJ_T0064314.1 MGP_CBAJ_G0027728.1 mouse_genomes_project 4 8879694 8913085 + MGP_CBAJ_P0064314 Rad54b protein_coding protein_coding MGP_CBAJ_T0064315.1 MGP_CBAJ_G0027728.1 mouse_genomes_project 4 8879701 8906298 + MGP_CBAJ_P0064315 Rad54b protein_coding protein_coding MGP_CBAJ_T0064316.1 MGP_CBAJ_G0027728.1 mouse_genomes_project 4 8879724 8947439 + MGP_CBAJ_P0064316 Rad54b protein_coding protein_coding MGP_CBAJ_T0064317.1 MGP_CBAJ_G0027728.1 mouse_genomes_project 4 8903983 8923103 + Rad54b protein_coding processed_transcript MGP_CBAJ_T0064319.1 MGP_CBAJ_G0027728.1 mouse_genomes_project 4 8923202 8936643 + MGP_CBAJ_P0064319 Rad54b protein_coding nonsense_mediated_decay MGP_CBAJ_T0064320.1 MGP_CBAJ_G0027728.1 mouse_genomes_project 4 8939873 8941276 + Rad54b protein_coding retained_intron MGP_CBAJ_T0014530.1 MGP_CBAJ_G0012642.1 mouse_genomes_project 4 126775281 126775757 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099238.1 MGP_CBAJ_G0037493.1 mouse_genomes_project 4 8546826 8546981 - Gm22940 snRNA snRNA MGP_CBAJ_T0014284.1 MGP_CBAJ_G0012396.1 mouse_genomes_project 4 27793312 27794230 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007899.1 MGP_CBAJ_G0006437.1 mouse_genomes_project 4 148715069 148716071 - Gm13001 lincRNA lincRNA MGP_CBAJ_T0066069.1 MGP_CBAJ_G0028146.1 mouse_genomes_project 4 107021975 107095862 - MGP_CBAJ_P0066069 Itgb3bp protein_coding protein_coding MGP_CBAJ_T0066070.1 MGP_CBAJ_G0028146.1 mouse_genomes_project 4 107022475 107206169 - Itgb3bp protein_coding processed_transcript MGP_CBAJ_T0066071.1 MGP_CBAJ_G0028146.1 mouse_genomes_project 4 107023904 107095768 - Itgb3bp protein_coding processed_transcript MGP_CBAJ_T0066072.1 MGP_CBAJ_G0028146.1 mouse_genomes_project 4 107028571 107095810 - Itgb3bp protein_coding processed_transcript MGP_CBAJ_T0066073.1 MGP_CBAJ_G0028146.1 mouse_genomes_project 4 107038534 107095766 - Itgb3bp protein_coding processed_transcript MGP_CBAJ_T0010476.1 MGP_CBAJ_G0008614.1 mouse_genomes_project 4 93408598 93408654 + Gm23154 miRNA miRNA MGP_CBAJ_T0064159.1 MGP_CBAJ_G0027698.1 mouse_genomes_project 4 206517 287022 + MGP_CBAJ_P0064159 Lyn protein_coding protein_coding MGP_CBAJ_T0065633.1 MGP_CBAJ_G0028045.1 mouse_genomes_project 4 72648629 72861445 - MGP_CBAJ_P0065633 Brinp1 protein_coding protein_coding MGP_CBAJ_T0065634.1 MGP_CBAJ_G0028045.1 mouse_genomes_project 4 72683005 72732822 - Brinp1 protein_coding processed_transcript MGP_CBAJ_T0065635.1 MGP_CBAJ_G0028045.1 mouse_genomes_project 4 72716651 72719325 - Brinp1 protein_coding processed_transcript MGP_CBAJ_T0004348.1 MGP_CBAJ_G0003788.1 mouse_genomes_project 4 32196585 32208569 - Bach2os antisense antisense MGP_CBAJ_T0004349.1 MGP_CBAJ_G0003788.1 mouse_genomes_project 4 32200002 32208524 - Bach2os antisense antisense MGP_CBAJ_T0004350.1 MGP_CBAJ_G0003788.1 mouse_genomes_project 4 32202544 32208615 - Bach2os antisense antisense MGP_CBAJ_T0007729.1 MGP_CBAJ_G0006312.1 mouse_genomes_project 4 43987745 43989227 + Gm26643 lincRNA lincRNA MGP_CBAJ_T0014451.1 MGP_CBAJ_G0012563.1 mouse_genomes_project 4 98160499 98163964 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014300.1 MGP_CBAJ_G0012412.1 mouse_genomes_project 4 32778994 32779441 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0066228.1 MGP_CBAJ_G0028187.1 mouse_genomes_project 4 114716491 114734158 + MGP_CBAJ_P0066228 Ttc22 protein_coding protein_coding MGP_CBAJ_T0066229.1 MGP_CBAJ_G0028187.1 mouse_genomes_project 4 114729945 114731597 + Ttc22 protein_coding processed_transcript MGP_CBAJ_T0067059.1 MGP_CBAJ_G0028358.1 mouse_genomes_project 4 128373510 128389416 + MGP_CBAJ_P0067059 P3h1 protein_coding protein_coding MGP_CBAJ_T0067060.1 MGP_CBAJ_G0028358.1 mouse_genomes_project 4 128373534 128389419 + MGP_CBAJ_P0067060 P3h1 protein_coding protein_coding MGP_CBAJ_T0067061.1 MGP_CBAJ_G0028358.1 mouse_genomes_project 4 128373541 128388811 + P3h1 protein_coding processed_transcript MGP_CBAJ_T0067062.1 MGP_CBAJ_G0028358.1 mouse_genomes_project 4 128373541 128389416 + MGP_CBAJ_P0067062 P3h1 protein_coding protein_coding MGP_CBAJ_T0067063.1 MGP_CBAJ_G0028358.1 mouse_genomes_project 4 128373549 128388813 + MGP_CBAJ_P0067063 P3h1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067064.1 MGP_CBAJ_G0028358.1 mouse_genomes_project 4 128373585 128389429 + MGP_CBAJ_P0067064 P3h1 protein_coding protein_coding MGP_CBAJ_T0067065.1 MGP_CBAJ_G0028358.1 mouse_genomes_project 4 128374395 128377503 + P3h1 protein_coding processed_transcript MGP_CBAJ_T0067066.1 MGP_CBAJ_G0028358.1 mouse_genomes_project 4 128375939 128381934 + P3h1 protein_coding processed_transcript MGP_CBAJ_T0067067.1 MGP_CBAJ_G0028358.1 mouse_genomes_project 4 128378512 128384588 + P3h1 protein_coding processed_transcript MGP_CBAJ_T0067068.1 MGP_CBAJ_G0028358.1 mouse_genomes_project 4 128385466 128388577 + P3h1 protein_coding processed_transcript MGP_CBAJ_T0067069.1 MGP_CBAJ_G0028358.1 mouse_genomes_project 4 128387082 128388816 + P3h1 protein_coding processed_transcript MGP_CBAJ_T0067070.1 MGP_CBAJ_G0028358.1 mouse_genomes_project 4 128387305 128388498 + P3h1 protein_coding retained_intron MGP_CBAJ_T0066630.1 MGP_CBAJ_G0028259.1 mouse_genomes_project 4 123460869 123466067 + MGP_CBAJ_P0066630 Pdzk1ip1 protein_coding protein_coding MGP_CBAJ_T0066631.1 MGP_CBAJ_G0028259.1 mouse_genomes_project 4 123460869 123466067 + MGP_CBAJ_P0066631 Pdzk1ip1 protein_coding protein_coding MGP_CBAJ_T0066632.1 MGP_CBAJ_G0028259.1 mouse_genomes_project 4 123460884 123466072 + MGP_CBAJ_P0066632 Pdzk1ip1 protein_coding protein_coding MGP_CBAJ_T0066633.1 MGP_CBAJ_G0028259.1 mouse_genomes_project 4 123460884 123466072 + MGP_CBAJ_P0066633 Pdzk1ip1 protein_coding protein_coding MGP_CBAJ_T0066634.1 MGP_CBAJ_G0028259.1 mouse_genomes_project 4 123461204 123463515 + Pdzk1ip1 protein_coding processed_transcript MGP_CBAJ_T0066635.1 MGP_CBAJ_G0028259.1 mouse_genomes_project 4 123462355 123466037 + Pdzk1ip1 protein_coding processed_transcript MGP_CBAJ_T0066636.1 MGP_CBAJ_G0028259.1 mouse_genomes_project 4 123462422 123463400 + Pdzk1ip1 protein_coding processed_transcript MGP_CBAJ_T0066637.1 MGP_CBAJ_G0028259.1 mouse_genomes_project 4 123463100 123466037 + Pdzk1ip1 protein_coding processed_transcript MGP_CBAJ_T0064148.1 MGP_CBAJ_G0027696.1 mouse_genomes_project 4 12325 39811 - MGP_CBAJ_P0064148 Tmem68 protein_coding protein_coding MGP_CBAJ_T0064149.1 MGP_CBAJ_G0027696.1 mouse_genomes_project 4 12325 39767 - MGP_CBAJ_P0064149 Tmem68 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064150.1 MGP_CBAJ_G0027696.1 mouse_genomes_project 4 13612 17122 - Tmem68 protein_coding retained_intron MGP_CBAJ_T0064151.1 MGP_CBAJ_G0027696.1 mouse_genomes_project 4 33557 39762 - Tmem68 protein_coding retained_intron MGP_CBAJ_T0064152.1 MGP_CBAJ_G0027696.1 mouse_genomes_project 4 33576 39762 - Tmem68 protein_coding processed_transcript MGP_CBAJ_T0064153.1 MGP_CBAJ_G0027696.1 mouse_genomes_project 4 33751 38691 - MGP_CBAJ_P0064153 Tmem68 protein_coding protein_coding MGP_CBAJ_T0014476.1 MGP_CBAJ_G0012588.1 mouse_genomes_project 4 108646101 108646273 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007835.1 MGP_CBAJ_G0006398.1 mouse_genomes_project 4 129910439 129917312 + Gm12860 lincRNA lincRNA MGP_CBAJ_T0069053.1 MGP_CBAJ_G0028828.1 mouse_genomes_project 4 166417868 166473094 + MGP_CBAJ_P0069053 Dnajc11 protein_coding protein_coding MGP_CBAJ_T0069054.1 MGP_CBAJ_G0028828.1 mouse_genomes_project 4 166417908 166466847 + Dnajc11 protein_coding retained_intron MGP_CBAJ_T0069055.1 MGP_CBAJ_G0028828.1 mouse_genomes_project 4 166417911 166447805 + Dnajc11 protein_coding retained_intron MGP_CBAJ_T0069056.1 MGP_CBAJ_G0028828.1 mouse_genomes_project 4 166417916 166472175 + Dnajc11 protein_coding retained_intron MGP_CBAJ_T0069057.1 MGP_CBAJ_G0028828.1 mouse_genomes_project 4 166417921 166472179 + MGP_CBAJ_P0069057 Dnajc11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069058.1 MGP_CBAJ_G0028828.1 mouse_genomes_project 4 166436700 166458734 + MGP_CBAJ_P0069058 Dnajc11 protein_coding protein_coding MGP_CBAJ_T0069059.1 MGP_CBAJ_G0028828.1 mouse_genomes_project 4 166447452 166461664 + Dnajc11 protein_coding processed_transcript MGP_CBAJ_T0069060.1 MGP_CBAJ_G0028828.1 mouse_genomes_project 4 166457955 166464447 + Dnajc11 protein_coding processed_transcript MGP_CBAJ_T0069061.1 MGP_CBAJ_G0028828.1 mouse_genomes_project 4 166459867 166467208 + Dnajc11 protein_coding retained_intron MGP_CBAJ_T0069062.1 MGP_CBAJ_G0028828.1 mouse_genomes_project 4 166459936 166461661 + Dnajc11 protein_coding retained_intron MGP_CBAJ_T0069063.1 MGP_CBAJ_G0028828.1 mouse_genomes_project 4 166469940 166471693 + Dnajc11 protein_coding retained_intron MGP_CBAJ_T0069064.1 MGP_CBAJ_G0028828.1 mouse_genomes_project 4 166470699 166472184 + Dnajc11 protein_coding retained_intron MGP_CBAJ_T0066405.1 MGP_CBAJ_G0028214.1 mouse_genomes_project 4 116462130 116479554 + MGP_CBAJ_P0066405 Echdc2 protein_coding protein_coding MGP_CBAJ_T0066406.1 MGP_CBAJ_G0028214.1 mouse_genomes_project 4 116462159 116479317 + MGP_CBAJ_P0066406 Echdc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066407.1 MGP_CBAJ_G0028214.1 mouse_genomes_project 4 116462159 116479553 + MGP_CBAJ_P0066407 Echdc2 protein_coding protein_coding MGP_CBAJ_T0066408.1 MGP_CBAJ_G0028214.1 mouse_genomes_project 4 116462181 116479552 + MGP_CBAJ_P0066408 Echdc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066409.1 MGP_CBAJ_G0028214.1 mouse_genomes_project 4 116462211 116479314 + MGP_CBAJ_P0066409 Echdc2 protein_coding protein_coding MGP_CBAJ_T0066410.1 MGP_CBAJ_G0028214.1 mouse_genomes_project 4 116469955 116479178 + MGP_CBAJ_P0066410 Echdc2 protein_coding protein_coding MGP_CBAJ_T0066411.1 MGP_CBAJ_G0028214.1 mouse_genomes_project 4 116470027 116475650 + Echdc2 protein_coding retained_intron MGP_CBAJ_T0066412.1 MGP_CBAJ_G0028214.1 mouse_genomes_project 4 116470383 116479553 + Echdc2 protein_coding processed_transcript MGP_CBAJ_T0066413.1 MGP_CBAJ_G0028214.1 mouse_genomes_project 4 116470394 116474094 + Echdc2 protein_coding processed_transcript MGP_CBAJ_T0066414.1 MGP_CBAJ_G0028214.1 mouse_genomes_project 4 116472402 116479405 + MGP_CBAJ_P0066414 Echdc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066415.1 MGP_CBAJ_G0028214.1 mouse_genomes_project 4 116472905 116477345 + Echdc2 protein_coding retained_intron MGP_CBAJ_T0066416.1 MGP_CBAJ_G0028214.1 mouse_genomes_project 4 116473932 116479305 + Echdc2 protein_coding retained_intron MGP_CBAJ_T0066417.1 MGP_CBAJ_G0028214.1 mouse_genomes_project 4 116474052 116479334 + MGP_CBAJ_P0066417 Echdc2 protein_coding protein_coding MGP_CBAJ_T0066884.1 MGP_CBAJ_G0028312.1 mouse_genomes_project 4 126145377 126163885 + MGP_CBAJ_P0066884 Tmem53 protein_coding protein_coding MGP_CBAJ_T0066885.1 MGP_CBAJ_G0028312.1 mouse_genomes_project 4 126145466 126163819 + MGP_CBAJ_P0066885 Tmem53 protein_coding protein_coding MGP_CBAJ_T0066886.1 MGP_CBAJ_G0028312.1 mouse_genomes_project 4 126145468 126163887 + MGP_CBAJ_P0066886 Tmem53 protein_coding protein_coding MGP_CBAJ_T0066887.1 MGP_CBAJ_G0028312.1 mouse_genomes_project 4 126145488 126163201 + Tmem53 protein_coding processed_transcript MGP_CBAJ_T0066888.1 MGP_CBAJ_G0028312.1 mouse_genomes_project 4 126145766 126163885 + MGP_CBAJ_P0066888 Tmem53 protein_coding protein_coding MGP_CBAJ_T0066889.1 MGP_CBAJ_G0028312.1 mouse_genomes_project 4 126160675 126163887 + Tmem53 protein_coding processed_transcript MGP_CBAJ_T0010528.1 MGP_CBAJ_G0008666.1 mouse_genomes_project 4 163727787 163727851 - Mir7023 miRNA miRNA MGP_CBAJ_T0100509.1 MGP_CBAJ_G0038764.1 mouse_genomes_project 4 363714 363851 - Gm24125 snoRNA snoRNA MGP_CBAJ_T0065280.1 MGP_CBAJ_G0027941.1 mouse_genomes_project 4 50233960 50260321 + MGP_CBAJ_P0065280 Msantd3 protein_coding protein_coding MGP_CBAJ_T0065281.1 MGP_CBAJ_G0027941.1 mouse_genomes_project 4 50234104 50259980 + MGP_CBAJ_P0065281 Msantd3 protein_coding protein_coding MGP_CBAJ_T0065282.1 MGP_CBAJ_G0027941.1 mouse_genomes_project 4 50258349 50260321 + Msantd3 protein_coding processed_transcript MGP_CBAJ_T0066474.1 MGP_CBAJ_G0028231.1 mouse_genomes_project 4 117437863 117503039 + MGP_CBAJ_P0066474 Nrd1 protein_coding protein_coding MGP_CBAJ_T0066475.1 MGP_CBAJ_G0028231.1 mouse_genomes_project 4 117437863 117503039 + MGP_CBAJ_P0066475 Nrd1 protein_coding protein_coding MGP_CBAJ_T0066476.1 MGP_CBAJ_G0028231.1 mouse_genomes_project 4 117437978 117502424 + MGP_CBAJ_P0066476 Nrd1 protein_coding protein_coding MGP_CBAJ_T0066477.1 MGP_CBAJ_G0028231.1 mouse_genomes_project 4 117458282 117485917 + MGP_CBAJ_P0066477 Nrd1 protein_coding protein_coding MGP_CBAJ_T0066478.1 MGP_CBAJ_G0028231.1 mouse_genomes_project 4 117465503 117474043 + Nrd1 protein_coding retained_intron MGP_CBAJ_T0066479.1 MGP_CBAJ_G0028231.1 mouse_genomes_project 4 117473737 117484683 + Nrd1 protein_coding retained_intron MGP_CBAJ_T0066480.1 MGP_CBAJ_G0028231.1 mouse_genomes_project 4 117481022 117485379 + Nrd1 protein_coding retained_intron MGP_CBAJ_T0066481.1 MGP_CBAJ_G0028231.1 mouse_genomes_project 4 117481467 117502738 + Nrd1 protein_coding processed_transcript MGP_CBAJ_T0066482.1 MGP_CBAJ_G0028231.1 mouse_genomes_project 4 117487547 117492161 + Nrd1 protein_coding processed_transcript MGP_CBAJ_T0066483.1 MGP_CBAJ_G0028231.1 mouse_genomes_project 4 117496216 117498139 + Nrd1 protein_coding retained_intron MGP_CBAJ_T0066484.1 MGP_CBAJ_G0028231.1 mouse_genomes_project 4 117500197 117501064 + Nrd1 protein_coding retained_intron MGP_CBAJ_T0066485.1 MGP_CBAJ_G0028231.1 mouse_genomes_project 4 117500254 117501943 + Nrd1 protein_coding retained_intron MGP_CBAJ_T0099290.1 MGP_CBAJ_G0037545.1 mouse_genomes_project 4 125444293 125444403 + Gm25137 snRNA snRNA MGP_CBAJ_T0004478.1 MGP_CBAJ_G0003887.1 mouse_genomes_project 4 150307996 150311126 + AB041806 antisense antisense MGP_CBAJ_T0001371.1 MGP_CBAJ_G0001297.1 mouse_genomes_project 4 42521506 42521984 - TEC TEC MGP_CBAJ_T0068400.1 MGP_CBAJ_G0028654.1 mouse_genomes_project 4 150129857 150198213 + MGP_CBAJ_P0068400 Kif17 protein_coding protein_coding MGP_CBAJ_T0068403.1 MGP_CBAJ_G0028654.1 mouse_genomes_project 4 150141678 150197738 + MGP_CBAJ_P0068403 Kif17 protein_coding protein_coding MGP_CBAJ_T0068404.1 MGP_CBAJ_G0028654.1 mouse_genomes_project 4 150141703 150198224 + MGP_CBAJ_P0068404 Kif17 protein_coding unknown_likely_coding MGP_CBAJ_T0068405.1 MGP_CBAJ_G0028654.1 mouse_genomes_project 4 150141918 150197628 + MGP_CBAJ_P0068405 Kif17 protein_coding protein_coding MGP_CBAJ_T0068406.1 MGP_CBAJ_G0028654.1 mouse_genomes_project 4 150141945 150175682 + Kif17 protein_coding retained_intron MGP_CBAJ_T0010527.1 MGP_CBAJ_G0008665.1 mouse_genomes_project 4 163596820 163596880 + Mir5616 miRNA miRNA MGP_CBAJ_T0017796.1 MGP_CBAJ_G0015292.1 mouse_genomes_project 4 67458573 67647149 + 8030451A03Rik processed_transcript processed_transcript MGP_CBAJ_T0017797.1 MGP_CBAJ_G0015292.1 mouse_genomes_project 4 67458662 67530698 + 8030451A03Rik processed_transcript processed_transcript MGP_CBAJ_T0017798.1 MGP_CBAJ_G0015292.1 mouse_genomes_project 4 67458679 67462060 + 8030451A03Rik processed_transcript processed_transcript MGP_CBAJ_T0017799.1 MGP_CBAJ_G0015292.1 mouse_genomes_project 4 67645777 67646170 + 8030451A03Rik processed_transcript processed_transcript MGP_CBAJ_T0064730.1 MGP_CBAJ_G0027834.1 mouse_genomes_project 4 42319884 42382394 - MGP_CBAJ_P0064730 Fam219a protein_coding protein_coding MGP_CBAJ_T0064731.1 MGP_CBAJ_G0027834.1 mouse_genomes_project 4 42319884 42382422 - MGP_CBAJ_P0064731 Fam219a protein_coding protein_coding MGP_CBAJ_T0064732.1 MGP_CBAJ_G0027834.1 mouse_genomes_project 4 42319884 42382422 - MGP_CBAJ_P0064732 Fam219a protein_coding protein_coding MGP_CBAJ_T0064733.1 MGP_CBAJ_G0027834.1 mouse_genomes_project 4 42325196 42382121 - MGP_CBAJ_P0064733 Fam219a protein_coding unknown_likely_coding MGP_CBAJ_T0064734.1 MGP_CBAJ_G0027834.1 mouse_genomes_project 4 42325276 42329724 - Fam219a protein_coding processed_transcript MGP_CBAJ_T0064735.1 MGP_CBAJ_G0027834.1 mouse_genomes_project 4 42329069 42382423 - Fam219a protein_coding processed_transcript MGP_CBAJ_T0010447.1 MGP_CBAJ_G0008585.1 mouse_genomes_project 4 9314349 9314413 + Gm25002 miRNA miRNA MGP_CBAJ_T0066009.1 MGP_CBAJ_G0028135.1 mouse_genomes_project 4 105409623 105425050 + Inadl protein_coding processed_transcript MGP_CBAJ_T0066010.1 MGP_CBAJ_G0028135.1 mouse_genomes_project 4 105409629 105765718 + MGP_CBAJ_P0066010 Inadl protein_coding protein_coding MGP_CBAJ_T0066011.1 MGP_CBAJ_G0028135.1 mouse_genomes_project 4 105409693 105711703 + MGP_CBAJ_P0066011 Inadl protein_coding protein_coding MGP_CBAJ_T0066012.1 MGP_CBAJ_G0028135.1 mouse_genomes_project 4 105409693 105588787 + MGP_CBAJ_P0066012 Inadl protein_coding protein_coding MGP_CBAJ_T0066013.1 MGP_CBAJ_G0028135.1 mouse_genomes_project 4 105409730 105486222 + MGP_CBAJ_P0066013 Inadl protein_coding protein_coding MGP_CBAJ_T0066014.1 MGP_CBAJ_G0028135.1 mouse_genomes_project 4 105435976 105457627 + Inadl protein_coding processed_transcript MGP_CBAJ_T0066015.1 MGP_CBAJ_G0028135.1 mouse_genomes_project 4 105462707 105468616 + Inadl protein_coding processed_transcript MGP_CBAJ_T0066016.1 MGP_CBAJ_G0028135.1 mouse_genomes_project 4 105468554 105534288 + MGP_CBAJ_P0066016 Inadl protein_coding protein_coding MGP_CBAJ_T0066017.1 MGP_CBAJ_G0028135.1 mouse_genomes_project 4 105478000 105764473 + MGP_CBAJ_P0066017 Inadl protein_coding protein_coding MGP_CBAJ_T0066018.1 MGP_CBAJ_G0028135.1 mouse_genomes_project 4 105531710 105544839 + Inadl protein_coding processed_transcript MGP_CBAJ_T0066019.1 MGP_CBAJ_G0028135.1 mouse_genomes_project 4 105555604 105573342 + MGP_CBAJ_P0066019 Inadl protein_coding protein_coding MGP_CBAJ_T0066020.1 MGP_CBAJ_G0028135.1 mouse_genomes_project 4 105580868 105765718 + MGP_CBAJ_P0066020 Inadl protein_coding protein_coding MGP_CBAJ_T0066021.1 MGP_CBAJ_G0028135.1 mouse_genomes_project 4 105581107 105726337 + MGP_CBAJ_P0066021 Inadl protein_coding protein_coding MGP_CBAJ_T0001375.1 MGP_CBAJ_G0001301.1 mouse_genomes_project 4 106444243 106446701 + TEC TEC MGP_CBAJ_T0007913.1 MGP_CBAJ_G0006450.1 mouse_genomes_project 4 153179803 153185410 + 4930515B02Rik lincRNA lincRNA MGP_CBAJ_T0068705.1 MGP_CBAJ_G0028737.1 mouse_genomes_project 4 156571311 156574414 + MGP_CBAJ_P0068705 protein_coding protein_coding MGP_CBAJ_T0068418.1 MGP_CBAJ_G0028661.1 mouse_genomes_project 4 150535261 150605324 - MGP_CBAJ_P0068418 Vwa5b1 protein_coding protein_coding MGP_CBAJ_T0068419.1 MGP_CBAJ_G0028661.1 mouse_genomes_project 4 150537247 150549713 - MGP_CBAJ_P0068419 Vwa5b1 protein_coding protein_coding MGP_CBAJ_T0068420.1 MGP_CBAJ_G0028661.1 mouse_genomes_project 4 150550259 150605475 - MGP_CBAJ_P0068420 Vwa5b1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068421.1 MGP_CBAJ_G0028661.1 mouse_genomes_project 4 150562883 150576460 - Vwa5b1 protein_coding processed_transcript MGP_CBAJ_T0068422.1 MGP_CBAJ_G0028661.1 mouse_genomes_project 4 150570084 150576927 - Vwa5b1 protein_coding processed_transcript MGP_CBAJ_T0004497.1 MGP_CBAJ_G0003901.1 mouse_genomes_project 4 154828097 154831638 + Gm13062 antisense antisense MGP_CBAJ_T0007837.1 MGP_CBAJ_G0006400.1 mouse_genomes_project 4 133951783 133958099 - Gm12916 lincRNA lincRNA MGP_CBAJ_T0014254.1 MGP_CBAJ_G0012366.1 mouse_genomes_project 4 20005428 20005697 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014561.1 MGP_CBAJ_G0012673.1 mouse_genomes_project 4 136308495 136308838 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014619.1 MGP_CBAJ_G0012731.1 mouse_genomes_project 4 166667262 166667748 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0069314.1 MGP_CBAJ_G0028874.1 mouse_genomes_project 4 170214971 170221572 + Faap20 protein_coding processed_transcript MGP_CBAJ_T0069315.1 MGP_CBAJ_G0028874.1 mouse_genomes_project 4 170215030 170216108 + Faap20 protein_coding processed_transcript MGP_CBAJ_T0069316.1 MGP_CBAJ_G0028874.1 mouse_genomes_project 4 170215046 170215966 + Faap20 protein_coding processed_transcript MGP_CBAJ_T0069317.1 MGP_CBAJ_G0028874.1 mouse_genomes_project 4 170215066 170221616 + Faap20 protein_coding processed_transcript MGP_CBAJ_T0069318.1 MGP_CBAJ_G0028874.1 mouse_genomes_project 4 170215133 170221840 + MGP_CBAJ_P0069318 Faap20 protein_coding protein_coding MGP_CBAJ_T0069319.1 MGP_CBAJ_G0028874.1 mouse_genomes_project 4 170215133 170221836 + MGP_CBAJ_P0069319 Faap20 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069320.1 MGP_CBAJ_G0028874.1 mouse_genomes_project 4 170215156 170221536 + MGP_CBAJ_P0069320 Faap20 protein_coding protein_coding MGP_CBAJ_T0069321.1 MGP_CBAJ_G0028874.1 mouse_genomes_project 4 170215170 170221837 + MGP_CBAJ_P0069321 Faap20 protein_coding protein_coding MGP_CBAJ_T0069322.1 MGP_CBAJ_G0028874.1 mouse_genomes_project 4 170215487 170221571 + MGP_CBAJ_P0069322 Faap20 protein_coding protein_coding MGP_CBAJ_T0069323.1 MGP_CBAJ_G0028874.1 mouse_genomes_project 4 170215851 170221601 + Faap20 protein_coding retained_intron MGP_CBAJ_T0068941.1 MGP_CBAJ_G0028806.1 mouse_genomes_project 4 163576298 163626348 + MGP_CBAJ_P0068941 Ctnnbip1 protein_coding protein_coding MGP_CBAJ_T0068942.1 MGP_CBAJ_G0028806.1 mouse_genomes_project 4 163604081 163624419 + MGP_CBAJ_P0068942 Ctnnbip1 protein_coding protein_coding MGP_CBAJ_T0065372.1 MGP_CBAJ_G0027971.1 mouse_genomes_project 4 57911051 57959048 + MGP_CBAJ_P0065372 Rad23b protein_coding protein_coding MGP_CBAJ_T0065373.1 MGP_CBAJ_G0027971.1 mouse_genomes_project 4 57911058 57930231 + Rad23b protein_coding processed_transcript MGP_CBAJ_T0065374.1 MGP_CBAJ_G0027971.1 mouse_genomes_project 4 57911060 57912193 + Rad23b protein_coding processed_transcript MGP_CBAJ_T0065375.1 MGP_CBAJ_G0027971.1 mouse_genomes_project 4 57911098 57942409 + Rad23b protein_coding processed_transcript MGP_CBAJ_T0064368.1 MGP_CBAJ_G0027743.1 mouse_genomes_project 4 12878204 12903955 + MGP_CBAJ_P0064368 Tmem64 protein_coding protein_coding MGP_CBAJ_T0069531.1 MGP_CBAJ_G0028918.1 mouse_genomes_project 4 171387563 171399750 - MGP_CBAJ_P0069531 Samd11 protein_coding protein_coding MGP_CBAJ_T0069532.1 MGP_CBAJ_G0028918.1 mouse_genomes_project 4 171388319 171398925 - MGP_CBAJ_P0069532 Samd11 protein_coding unknown_likely_coding MGP_CBAJ_T0011453.1 MGP_CBAJ_G0009591.1 mouse_genomes_project 4 125508724 125508815 + Gm27688 misc_RNA misc_RNA MGP_CBAJ_T0068228.1 MGP_CBAJ_G0028617.1 mouse_genomes_project 4 147309663 147316934 + MGP_CBAJ_P0068228 Gale protein_coding protein_coding MGP_CBAJ_T0068229.1 MGP_CBAJ_G0028617.1 mouse_genomes_project 4 147309693 147311566 + MGP_CBAJ_P0068229 Gale protein_coding protein_coding MGP_CBAJ_T0068230.1 MGP_CBAJ_G0028617.1 mouse_genomes_project 4 147309696 147312802 + Gale protein_coding retained_intron MGP_CBAJ_T0068231.1 MGP_CBAJ_G0028617.1 mouse_genomes_project 4 147309753 147311556 + MGP_CBAJ_P0068231 Gale protein_coding protein_coding MGP_CBAJ_T0068232.1 MGP_CBAJ_G0028617.1 mouse_genomes_project 4 147311101 147316934 + MGP_CBAJ_P0068232 Gale protein_coding protein_coding MGP_CBAJ_T0068233.1 MGP_CBAJ_G0028617.1 mouse_genomes_project 4 147311131 147312856 + Gale protein_coding retained_intron MGP_CBAJ_T0068234.1 MGP_CBAJ_G0028617.1 mouse_genomes_project 4 147311555 147316459 + Gale protein_coding retained_intron MGP_CBAJ_T0014435.1 MGP_CBAJ_G0012547.1 mouse_genomes_project 4 90927011 90927323 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067025.1 MGP_CBAJ_G0028344.1 mouse_genomes_project 4 127854725 127857316 - MGP_CBAJ_P0067025 Olfr1335 protein_coding protein_coding MGP_CBAJ_T0065264.1 MGP_CBAJ_G0027938.1 mouse_genomes_project 4 49852416 49943512 - MGP_CBAJ_P0065264 Erp44 protein_coding protein_coding MGP_CBAJ_T0065265.1 MGP_CBAJ_G0027938.1 mouse_genomes_project 4 49853583 49856118 - Erp44 protein_coding processed_transcript MGP_CBAJ_T0065266.1 MGP_CBAJ_G0027938.1 mouse_genomes_project 4 49902337 49908575 - Erp44 protein_coding processed_transcript MGP_CBAJ_T0065267.1 MGP_CBAJ_G0027938.1 mouse_genomes_project 4 49904980 49943406 - Erp44 protein_coding processed_transcript MGP_CBAJ_T0067481.1 MGP_CBAJ_G0028462.1 mouse_genomes_project 4 137919654 137963578 - MGP_CBAJ_P0067481 CK137956 protein_coding protein_coding MGP_CBAJ_T0065423.1 MGP_CBAJ_G0027984.1 mouse_genomes_project 4 60395679 60729781 + MGP_CBAJ_P0065423 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065425.1 MGP_CBAJ_G0027984.1 mouse_genomes_project 4 60395830 60683964 + MGP_CBAJ_P0065425 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065431.1 MGP_CBAJ_G0027984.1 mouse_genomes_project 4 60674825 60729783 + MGP_CBAJ_P0065431 protein_coding protein_coding MGP_CBAJ_T0098046.1 MGP_CBAJ_G0036319.1 mouse_genomes_project 4 87895212 87895317 + n-R5s188 rRNA rRNA MGP_CBAJ_T0068075.1 MGP_CBAJ_G0028580.1 mouse_genomes_project 4 145225351 145226763 + MGP_CBAJ_P0068075 E130218I03Rik protein_coding protein_coding MGP_CBAJ_T0068076.1 MGP_CBAJ_G0028580.1 mouse_genomes_project 4 145225452 145227563 + MGP_CBAJ_P0068076 E130218I03Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0068077.1 MGP_CBAJ_G0028580.1 mouse_genomes_project 4 145225452 145227559 + MGP_CBAJ_P0068077 E130218I03Rik protein_coding protein_coding MGP_CBAJ_T0068078.1 MGP_CBAJ_G0028580.1 mouse_genomes_project 4 145225465 145226679 + MGP_CBAJ_P0068078 E130218I03Rik protein_coding protein_coding MGP_CBAJ_T0068079.1 MGP_CBAJ_G0028580.1 mouse_genomes_project 4 145225465 145227002 + MGP_CBAJ_P0068079 E130218I03Rik protein_coding protein_coding MGP_CBAJ_T0068080.1 MGP_CBAJ_G0028580.1 mouse_genomes_project 4 145225466 145227242 + MGP_CBAJ_P0068080 E130218I03Rik protein_coding protein_coding MGP_CBAJ_T0068081.1 MGP_CBAJ_G0028580.1 mouse_genomes_project 4 145225467 145227209 + MGP_CBAJ_P0068081 E130218I03Rik protein_coding protein_coding MGP_CBAJ_T0068082.1 MGP_CBAJ_G0028580.1 mouse_genomes_project 4 145225672 145226967 + E130218I03Rik protein_coding processed_transcript MGP_CBAJ_T0007889.1 MGP_CBAJ_G0006430.1 mouse_genomes_project 4 142922361 142923970 + Gm17300 lincRNA lincRNA MGP_CBAJ_T0066192.1 MGP_CBAJ_G0028173.1 mouse_genomes_project 4 111050935 111118449 + MGP_CBAJ_P0066192 Oma1 protein_coding protein_coding MGP_CBAJ_T0066193.1 MGP_CBAJ_G0028173.1 mouse_genomes_project 4 111064076 111075625 + Oma1 protein_coding processed_transcript MGP_CBAJ_T0066194.1 MGP_CBAJ_G0028173.1 mouse_genomes_project 4 111075643 111123910 + Oma1 protein_coding processed_transcript MGP_CBAJ_T0004383.1 MGP_CBAJ_G0003818.1 mouse_genomes_project 4 88165239 88166146 + Gm11269 antisense antisense MGP_CBAJ_T0067026.1 MGP_CBAJ_G0028345.1 mouse_genomes_project 4 127854941 127886570 - MGP_CBAJ_P0067026 protein_coding protein_coding MGP_CBAJ_T0066280.1 MGP_CBAJ_G0028195.1 mouse_genomes_project 4 115231376 115242637 + Cyb5rl protein_coding retained_intron MGP_CBAJ_T0066281.1 MGP_CBAJ_G0028195.1 mouse_genomes_project 4 115231376 115250180 + MGP_CBAJ_P0066281 Cyb5rl protein_coding protein_coding MGP_CBAJ_T0066282.1 MGP_CBAJ_G0028195.1 mouse_genomes_project 4 115231384 115251915 + MGP_CBAJ_P0066282 Cyb5rl protein_coding protein_coding MGP_CBAJ_T0066283.1 MGP_CBAJ_G0028195.1 mouse_genomes_project 4 115231384 115235304 + MGP_CBAJ_P0066283 Cyb5rl protein_coding protein_coding MGP_CBAJ_T0066284.1 MGP_CBAJ_G0028195.1 mouse_genomes_project 4 115231407 115252622 + MGP_CBAJ_P0066284 Cyb5rl protein_coding nonsense_mediated_decay MGP_CBAJ_T0066285.1 MGP_CBAJ_G0028195.1 mouse_genomes_project 4 115231412 115235320 + MGP_CBAJ_P0066285 Cyb5rl protein_coding protein_coding MGP_CBAJ_T0066286.1 MGP_CBAJ_G0028195.1 mouse_genomes_project 4 115232993 115250180 + MGP_CBAJ_P0066286 Cyb5rl protein_coding protein_coding MGP_CBAJ_T0066287.1 MGP_CBAJ_G0028195.1 mouse_genomes_project 4 115233031 115252345 + MGP_CBAJ_P0066287 Cyb5rl protein_coding nonsense_mediated_decay MGP_CBAJ_T0066288.1 MGP_CBAJ_G0028195.1 mouse_genomes_project 4 115234556 115249160 + MGP_CBAJ_P0066288 Cyb5rl protein_coding protein_coding MGP_CBAJ_T0066289.1 MGP_CBAJ_G0028195.1 mouse_genomes_project 4 115235258 115248695 + MGP_CBAJ_P0066289 Cyb5rl protein_coding protein_coding MGP_CBAJ_T0066290.1 MGP_CBAJ_G0028195.1 mouse_genomes_project 4 115245376 115252131 + MGP_CBAJ_P0066290 Cyb5rl protein_coding protein_coding MGP_CBAJ_T0065470.1 MGP_CBAJ_G0027995.1 mouse_genomes_project 4 61904707 61927977 - MGP_CBAJ_P0065470 Ptgr1 protein_coding protein_coding MGP_CBAJ_T0067263.1 MGP_CBAJ_G0028407.1 mouse_genomes_project 4 133522948 133529137 + MGP_CBAJ_P0067263 Mycbp protein_coding protein_coding MGP_CBAJ_T0067264.1 MGP_CBAJ_G0028407.1 mouse_genomes_project 4 133523038 133529198 + MGP_CBAJ_P0067264 Mycbp protein_coding protein_coding MGP_CBAJ_T0067265.1 MGP_CBAJ_G0028407.1 mouse_genomes_project 4 133523075 133527786 + Mycbp protein_coding processed_transcript MGP_CBAJ_T0067266.1 MGP_CBAJ_G0028407.1 mouse_genomes_project 4 133523170 133529303 + Mycbp protein_coding processed_transcript MGP_CBAJ_T0064568.1 MGP_CBAJ_G0027796.1 mouse_genomes_project 4 34430889 34449524 + MGP_CBAJ_P0064568 Akirin2 protein_coding protein_coding MGP_CBAJ_T0100566.1 MGP_CBAJ_G0038821.1 mouse_genomes_project 4 114146477 114146592 - Gm26047 snoRNA snoRNA MGP_CBAJ_T0064996.1 MGP_CBAJ_G0027879.1 mouse_genomes_project 4 44581551 44591645 + MGP_CBAJ_P0064996 Rgp1 protein_coding protein_coding MGP_CBAJ_T0064997.1 MGP_CBAJ_G0027879.1 mouse_genomes_project 4 44581571 44591643 + MGP_CBAJ_P0064997 Rgp1 protein_coding protein_coding MGP_CBAJ_T0064998.1 MGP_CBAJ_G0027879.1 mouse_genomes_project 4 44581790 44583758 + Rgp1 protein_coding processed_transcript MGP_CBAJ_T0064999.1 MGP_CBAJ_G0027879.1 mouse_genomes_project 4 44581794 44585965 + MGP_CBAJ_P0064999 Rgp1 protein_coding protein_coding MGP_CBAJ_T0065000.1 MGP_CBAJ_G0027879.1 mouse_genomes_project 4 44581819 44582457 + Rgp1 protein_coding retained_intron MGP_CBAJ_T0065001.1 MGP_CBAJ_G0027879.1 mouse_genomes_project 4 44582571 44583754 + Rgp1 protein_coding retained_intron MGP_CBAJ_T0065002.1 MGP_CBAJ_G0027879.1 mouse_genomes_project 4 44584048 44584555 + Rgp1 protein_coding retained_intron MGP_CBAJ_T0100590.1 MGP_CBAJ_G0038845.1 mouse_genomes_project 4 142922911 142923116 - Snora73b snoRNA snoRNA MGP_CBAJ_T0068617.1 MGP_CBAJ_G0028711.1 mouse_genomes_project 4 153922940 154019479 - MGP_CBAJ_P0068617 Spen protein_coding protein_coding MGP_CBAJ_T0068618.1 MGP_CBAJ_G0028711.1 mouse_genomes_project 4 153922940 154019331 - MGP_CBAJ_P0068618 Spen protein_coding protein_coding MGP_CBAJ_T0068619.1 MGP_CBAJ_G0028711.1 mouse_genomes_project 4 153923505 153926534 - Spen protein_coding processed_transcript MGP_CBAJ_T0068620.1 MGP_CBAJ_G0028711.1 mouse_genomes_project 4 153954812 153987027 - Spen protein_coding processed_transcript MGP_CBAJ_T0068621.1 MGP_CBAJ_G0028711.1 mouse_genomes_project 4 153994596 154019135 - Spen protein_coding processed_transcript MGP_CBAJ_T0014250.1 MGP_CBAJ_G0012362.1 mouse_genomes_project 4 17452074 17452926 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0067038.1 MGP_CBAJ_G0028353.1 mouse_genomes_project 4 128300532 128304979 - MGP_CBAJ_P0067038 Zfp691 protein_coding protein_coding MGP_CBAJ_T0067039.1 MGP_CBAJ_G0028353.1 mouse_genomes_project 4 128300532 128305318 - MGP_CBAJ_P0067039 Zfp691 protein_coding protein_coding MGP_CBAJ_T0067040.1 MGP_CBAJ_G0028353.1 mouse_genomes_project 4 128300535 128304979 - MGP_CBAJ_P0067040 Zfp691 protein_coding protein_coding MGP_CBAJ_T0067041.1 MGP_CBAJ_G0028353.1 mouse_genomes_project 4 128302013 128304979 - MGP_CBAJ_P0067041 Zfp691 protein_coding protein_coding MGP_CBAJ_T0001386.1 MGP_CBAJ_G0001311.1 mouse_genomes_project 4 146719437 146719767 + TEC TEC MGP_CBAJ_T0014357.1 MGP_CBAJ_G0012469.1 mouse_genomes_project 4 55156206 55156827 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007731.1 MGP_CBAJ_G0006314.1 mouse_genomes_project 4 44776700 44781215 + lincRNA lincRNA MGP_CBAJ_T0064413.1 MGP_CBAJ_G0027762.1 mouse_genomes_project 4 20067643 20092630 + MGP_CBAJ_P0064413 Ccnc protein_coding protein_coding MGP_CBAJ_T0064414.1 MGP_CBAJ_G0027762.1 mouse_genomes_project 4 20067668 20092630 + MGP_CBAJ_P0064414 Ccnc protein_coding protein_coding MGP_CBAJ_T0064415.1 MGP_CBAJ_G0027762.1 mouse_genomes_project 4 20067668 20104423 + MGP_CBAJ_P0064415 Ccnc protein_coding protein_coding MGP_CBAJ_T0064416.1 MGP_CBAJ_G0027762.1 mouse_genomes_project 4 20067683 20080603 + Ccnc protein_coding processed_transcript MGP_CBAJ_T0064417.1 MGP_CBAJ_G0027762.1 mouse_genomes_project 4 20067695 20090046 + Ccnc protein_coding processed_transcript MGP_CBAJ_T0064418.1 MGP_CBAJ_G0027762.1 mouse_genomes_project 4 20067697 20090046 + MGP_CBAJ_P0064418 Ccnc protein_coding protein_coding MGP_CBAJ_T0064419.1 MGP_CBAJ_G0027762.1 mouse_genomes_project 4 20067700 20074716 + Ccnc protein_coding processed_transcript MGP_CBAJ_T0064420.1 MGP_CBAJ_G0027762.1 mouse_genomes_project 4 20067709 20090638 + Ccnc protein_coding processed_transcript MGP_CBAJ_T0066505.1 MGP_CBAJ_G0028233.1 mouse_genomes_project 4 117689138 117733251 + MGP_CBAJ_P0066505 Calr4 protein_coding protein_coding MGP_CBAJ_T0066506.1 MGP_CBAJ_G0028233.1 mouse_genomes_project 4 117713965 117733501 + MGP_CBAJ_P0066506 Calr4 protein_coding protein_coding MGP_CBAJ_T0066507.1 MGP_CBAJ_G0028233.1 mouse_genomes_project 4 117715112 117733501 + MGP_CBAJ_P0066507 Calr4 protein_coding protein_coding MGP_CBAJ_T0066508.1 MGP_CBAJ_G0028233.1 mouse_genomes_project 4 117724059 117733073 + Calr4 protein_coding processed_transcript MGP_CBAJ_T0067051.1 MGP_CBAJ_G0028355.1 mouse_genomes_project 4 128329120 128334896 + MGP_CBAJ_P0067051 Svbp protein_coding protein_coding MGP_CBAJ_T0067052.1 MGP_CBAJ_G0028355.1 mouse_genomes_project 4 128329221 128334896 + MGP_CBAJ_P0067052 Svbp protein_coding protein_coding MGP_CBAJ_T0067053.1 MGP_CBAJ_G0028355.1 mouse_genomes_project 4 128329310 128334896 + MGP_CBAJ_P0067053 Svbp protein_coding protein_coding MGP_CBAJ_T0014386.1 MGP_CBAJ_G0012498.1 mouse_genomes_project 4 70397866 70398341 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0066959.1 MGP_CBAJ_G0028325.1 mouse_genomes_project 4 126886306 127114402 - MGP_CBAJ_P0066959 St3gal3 protein_coding protein_coding MGP_CBAJ_T0066960.1 MGP_CBAJ_G0028325.1 mouse_genomes_project 4 126886310 127114426 - MGP_CBAJ_P0066960 St3gal3 protein_coding protein_coding MGP_CBAJ_T0066961.1 MGP_CBAJ_G0028325.1 mouse_genomes_project 4 126886312 127114394 - MGP_CBAJ_P0066961 St3gal3 protein_coding protein_coding MGP_CBAJ_T0066962.1 MGP_CBAJ_G0028325.1 mouse_genomes_project 4 126899935 126995463 - MGP_CBAJ_P0066962 St3gal3 protein_coding protein_coding MGP_CBAJ_T0066963.1 MGP_CBAJ_G0028325.1 mouse_genomes_project 4 126900027 126928230 - MGP_CBAJ_P0066963 St3gal3 protein_coding protein_coding MGP_CBAJ_T0064648.1 MGP_CBAJ_G0027814.1 mouse_genomes_project 4 41118107 41123111 + MGP_CBAJ_P0064648 Tmem215 protein_coding protein_coding MGP_CBAJ_T0064649.1 MGP_CBAJ_G0027814.1 mouse_genomes_project 4 41119057 41121549 + MGP_CBAJ_P0064649 Tmem215 protein_coding protein_coding MGP_CBAJ_T0068026.1 MGP_CBAJ_G0028571.1 mouse_genomes_project 4 145009720 145046237 + MGP_CBAJ_P0068026 Aim1l protein_coding unknown_likely_coding MGP_CBAJ_T0068027.1 MGP_CBAJ_G0028571.1 mouse_genomes_project 4 145014795 145021606 + MGP_CBAJ_P0068027 Aim1l protein_coding protein_coding MGP_CBAJ_T0068028.1 MGP_CBAJ_G0028571.1 mouse_genomes_project 4 145017287 145046334 + MGP_CBAJ_P0068028 Aim1l protein_coding protein_coding MGP_CBAJ_T0068029.1 MGP_CBAJ_G0028571.1 mouse_genomes_project 4 145027725 145031574 + Aim1l protein_coding processed_transcript MGP_CBAJ_T0068030.1 MGP_CBAJ_G0028571.1 mouse_genomes_project 4 145027806 145039046 + MGP_CBAJ_P0068030 Aim1l protein_coding protein_coding MGP_CBAJ_T0068031.1 MGP_CBAJ_G0028571.1 mouse_genomes_project 4 145031199 145044929 + Aim1l protein_coding retained_intron MGP_CBAJ_T0068032.1 MGP_CBAJ_G0028571.1 mouse_genomes_project 4 145031199 145046331 + Aim1l protein_coding retained_intron MGP_CBAJ_T0068033.1 MGP_CBAJ_G0028571.1 mouse_genomes_project 4 145031202 145041066 + Aim1l protein_coding retained_intron MGP_CBAJ_T0068034.1 MGP_CBAJ_G0028571.1 mouse_genomes_project 4 145031237 145040630 + Aim1l protein_coding retained_intron MGP_CBAJ_T0068035.1 MGP_CBAJ_G0028571.1 mouse_genomes_project 4 145031323 145031757 + Aim1l protein_coding retained_intron MGP_CBAJ_T0068037.1 MGP_CBAJ_G0028571.1 mouse_genomes_project 4 145044647 145046216 + Aim1l protein_coding retained_intron MGP_CBAJ_T0068038.1 MGP_CBAJ_G0028571.1 mouse_genomes_project 4 145044982 145046326 + Aim1l protein_coding processed_transcript MGP_CBAJ_T0004498.1 MGP_CBAJ_G0003902.1 mouse_genomes_project 4 157545188 157546622 + Pramef12os antisense antisense MGP_CBAJ_T0011687.1 MGP_CBAJ_G0009816.1 mouse_genomes_project 4 127376852 127379621 + MGP_CBAJ_P0011687 Hyi polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0011688.1 MGP_CBAJ_G0009816.1 mouse_genomes_project 4 127376861 127378181 + Hyi polymorphic_pseudogene retained_intron MGP_CBAJ_T0011689.1 MGP_CBAJ_G0009816.1 mouse_genomes_project 4 127376861 127379621 + MGP_CBAJ_P0011689 Hyi polymorphic_pseudogene nonsense_mediated_decay MGP_CBAJ_T0011690.1 MGP_CBAJ_G0009816.1 mouse_genomes_project 4 127376876 127379621 + MGP_CBAJ_P0011690 Hyi polymorphic_pseudogene protein_coding MGP_CBAJ_T0011691.1 MGP_CBAJ_G0009816.1 mouse_genomes_project 4 127378198 127379372 + Hyi polymorphic_pseudogene retained_intron MGP_CBAJ_T0066977.1 MGP_CBAJ_G0009816.1 mouse_genomes_project 4 127376895 127379628 + MGP_CBAJ_P0066977 Hyi polymorphic_pseudogene unknown_likely_coding MGP_CBAJ_T0014317.1 MGP_CBAJ_G0012429.1 mouse_genomes_project 4 39123955 39124877 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0066652.1 MGP_CBAJ_G0028268.1 mouse_genomes_project 4 124233649 124274038 - MGP_CBAJ_P0066652 Cyp4b1 protein_coding protein_coding MGP_CBAJ_T0066653.1 MGP_CBAJ_G0028268.1 mouse_genomes_project 4 124233649 124265563 - MGP_CBAJ_P0066653 Cyp4b1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066654.1 MGP_CBAJ_G0028268.1 mouse_genomes_project 4 124238134 124268298 - MGP_CBAJ_P0066654 Cyp4b1 protein_coding protein_coding MGP_CBAJ_T0066655.1 MGP_CBAJ_G0028268.1 mouse_genomes_project 4 124242767 124259897 - Cyp4b1 protein_coding retained_intron MGP_CBAJ_T0064490.1 MGP_CBAJ_G0027778.1 mouse_genomes_project 4 28015981 28201085 + MGP_CBAJ_P0064490 Epha7 protein_coding protein_coding MGP_CBAJ_T0064491.1 MGP_CBAJ_G0027778.1 mouse_genomes_project 4 28015981 28180596 + MGP_CBAJ_P0064491 Epha7 protein_coding protein_coding MGP_CBAJ_T0064492.1 MGP_CBAJ_G0027778.1 mouse_genomes_project 4 28016002 28200401 + MGP_CBAJ_P0064492 Epha7 protein_coding protein_coding MGP_CBAJ_T0064493.1 MGP_CBAJ_G0027778.1 mouse_genomes_project 4 28016100 28201085 + MGP_CBAJ_P0064493 Epha7 protein_coding protein_coding MGP_CBAJ_T0064494.1 MGP_CBAJ_G0027778.1 mouse_genomes_project 4 28016176 28076390 + Epha7 protein_coding processed_transcript MGP_CBAJ_T0064495.1 MGP_CBAJ_G0027778.1 mouse_genomes_project 4 28018279 28023879 + Epha7 protein_coding processed_transcript MGP_CBAJ_T0064496.1 MGP_CBAJ_G0027778.1 mouse_genomes_project 4 28074429 28177049 + Epha7 protein_coding processed_transcript MGP_CBAJ_T0064497.1 MGP_CBAJ_G0027778.1 mouse_genomes_project 4 28074512 28179883 + Epha7 protein_coding processed_transcript MGP_CBAJ_T0011428.1 MGP_CBAJ_G0009566.1 mouse_genomes_project 4 16791791 16792079 + Gm25971 misc_RNA misc_RNA MGP_CBAJ_T0004424.1 MGP_CBAJ_G0003843.1 mouse_genomes_project 4 123511821 123515698 + Cyp4x1os antisense antisense MGP_CBAJ_T0064672.1 MGP_CBAJ_G0027819.1 mouse_genomes_project 4 41631879 41645963 + MGP_CBAJ_P0064672 Spink4 protein_coding protein_coding MGP_CBAJ_T0064673.1 MGP_CBAJ_G0027819.1 mouse_genomes_project 4 41631881 41636871 + Spink4 protein_coding processed_transcript MGP_CBAJ_T0007795.1 MGP_CBAJ_G0006367.1 mouse_genomes_project 4 101917004 101933304 + Gm12708 lincRNA lincRNA MGP_CBAJ_T0007796.1 MGP_CBAJ_G0006367.1 mouse_genomes_project 4 101917053 101929825 + Gm12708 lincRNA lincRNA MGP_CBAJ_T0014206.1 MGP_CBAJ_G0012318.1 mouse_genomes_project 4 5084678 5085138 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065122.1 MGP_CBAJ_G0027904.1 mouse_genomes_project 4 46247683 46264082 + MGP_CBAJ_P0065122 Polr1e protein_coding protein_coding MGP_CBAJ_T0065123.1 MGP_CBAJ_G0027904.1 mouse_genomes_project 4 46247762 46262755 + MGP_CBAJ_P0065123 Polr1e protein_coding protein_coding MGP_CBAJ_T0065124.1 MGP_CBAJ_G0027904.1 mouse_genomes_project 4 46247763 46266955 + MGP_CBAJ_P0065124 Polr1e protein_coding protein_coding MGP_CBAJ_T0065125.1 MGP_CBAJ_G0027904.1 mouse_genomes_project 4 46247797 46255971 + Polr1e protein_coding processed_transcript MGP_CBAJ_T0065126.1 MGP_CBAJ_G0027904.1 mouse_genomes_project 4 46248335 46262502 + MGP_CBAJ_P0065126 Polr1e protein_coding protein_coding MGP_CBAJ_T0065127.1 MGP_CBAJ_G0027904.1 mouse_genomes_project 4 46258244 46261775 + Polr1e protein_coding processed_transcript MGP_CBAJ_T0065128.1 MGP_CBAJ_G0027904.1 mouse_genomes_project 4 46260362 46262750 + Polr1e protein_coding processed_transcript MGP_CBAJ_T0065337.1 MGP_CBAJ_G0027961.1 mouse_genomes_project 4 55313701 55314646 + MGP_CBAJ_P0065337 Olfr270 protein_coding protein_coding MGP_CBAJ_T0065338.1 MGP_CBAJ_G0027961.1 mouse_genomes_project 4 55313707 55314646 + MGP_CBAJ_P0065338 Olfr270 protein_coding protein_coding MGP_CBAJ_T0014330.1 MGP_CBAJ_G0012442.1 mouse_genomes_project 4 44863510 44864870 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064706.1 MGP_CBAJ_G0027828.1 mouse_genomes_project 4 42073113 42096681 - MGP_CBAJ_P0064706 Dcaf12 protein_coding protein_coding MGP_CBAJ_T0066688.1 MGP_CBAJ_G0028275.1 mouse_genomes_project 4 124552765 124561347 + MGP_CBAJ_P0066688 6430628N08Rik protein_coding protein_coding MGP_CBAJ_T0004360.1 MGP_CBAJ_G0003797.1 mouse_genomes_project 4 44651482 44661579 - Gm12473 antisense antisense MGP_CBAJ_T0100563.1 MGP_CBAJ_G0038818.1 mouse_genomes_project 4 110411620 110411748 + Gm24869 snoRNA snoRNA MGP_CBAJ_T0066301.1 MGP_CBAJ_G0028198.1 mouse_genomes_project 4 115353385 115378692 + MGP_CBAJ_P0066301 Tmem59 protein_coding protein_coding MGP_CBAJ_T0066302.1 MGP_CBAJ_G0028198.1 mouse_genomes_project 4 115353513 115365677 + MGP_CBAJ_P0066302 Tmem59 protein_coding protein_coding MGP_CBAJ_T0066303.1 MGP_CBAJ_G0028198.1 mouse_genomes_project 4 115353513 115378394 + MGP_CBAJ_P0066303 Tmem59 protein_coding protein_coding MGP_CBAJ_T0066304.1 MGP_CBAJ_G0028198.1 mouse_genomes_project 4 115353653 115365880 + Tmem59 protein_coding retained_intron MGP_CBAJ_T0066305.1 MGP_CBAJ_G0028198.1 mouse_genomes_project 4 115353712 115378202 + MGP_CBAJ_P0066305 Tmem59 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066306.1 MGP_CBAJ_G0028198.1 mouse_genomes_project 4 115354004 115378690 + Tmem59 protein_coding processed_transcript MGP_CBAJ_T0097817.1 MGP_CBAJ_G0036090.1 mouse_genomes_project 4 140214713 140216356 + pseudogene pseudogene MGP_CBAJ_T0100549.1 MGP_CBAJ_G0038804.1 mouse_genomes_project 4 77118239 77118377 - Gm25653 snoRNA snoRNA MGP_CBAJ_T0066949.1 MGP_CBAJ_G0028323.1 mouse_genomes_project 4 126845116 126851295 - Ipo13 protein_coding processed_transcript MGP_CBAJ_T0066950.1 MGP_CBAJ_G0028323.1 mouse_genomes_project 4 126845116 126865303 - MGP_CBAJ_P0066950 Ipo13 protein_coding protein_coding MGP_CBAJ_T0066951.1 MGP_CBAJ_G0028323.1 mouse_genomes_project 4 126845257 126845745 - Ipo13 protein_coding processed_transcript MGP_CBAJ_T0066952.1 MGP_CBAJ_G0028323.1 mouse_genomes_project 4 126845522 126846504 - Ipo13 protein_coding processed_transcript MGP_CBAJ_T0066953.1 MGP_CBAJ_G0028323.1 mouse_genomes_project 4 126845970 126846523 - Ipo13 protein_coding processed_transcript MGP_CBAJ_T0066954.1 MGP_CBAJ_G0028323.1 mouse_genomes_project 4 126851587 126854500 - Ipo13 protein_coding processed_transcript MGP_CBAJ_T0017851.1 MGP_CBAJ_G0015323.1 mouse_genomes_project 4 153098925 153105585 + Gm13032 processed_transcript processed_transcript MGP_CBAJ_T0014322.1 MGP_CBAJ_G0012434.1 mouse_genomes_project 4 40477357 40478312 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014356.1 MGP_CBAJ_G0012468.1 mouse_genomes_project 4 55156197 55159084 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0067645.1 MGP_CBAJ_G0028494.1 mouse_genomes_project 4 139886112 139892017 - MGP_CBAJ_P0067645 Dcdc2b protein_coding protein_coding MGP_CBAJ_T0067646.1 MGP_CBAJ_G0028494.1 mouse_genomes_project 4 139886310 139887030 - Dcdc2b protein_coding retained_intron MGP_CBAJ_T0067647.1 MGP_CBAJ_G0028494.1 mouse_genomes_project 4 139886529 139892014 - MGP_CBAJ_P0067647 Dcdc2b protein_coding protein_coding MGP_CBAJ_T0067751.1 MGP_CBAJ_G0028514.1 mouse_genomes_project 4 140870985 140919039 + MGP_CBAJ_P0067751 Nkain1 protein_coding protein_coding MGP_CBAJ_T0067752.1 MGP_CBAJ_G0028514.1 mouse_genomes_project 4 140871192 140919055 + MGP_CBAJ_P0067752 Nkain1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067753.1 MGP_CBAJ_G0028514.1 mouse_genomes_project 4 140892651 140911566 + Nkain1 protein_coding processed_transcript MGP_CBAJ_T0007733.1 MGP_CBAJ_G0006316.1 mouse_genomes_project 4 46955439 46957807 + lincRNA lincRNA MGP_CBAJ_T0014352.1 MGP_CBAJ_G0012464.1 mouse_genomes_project 4 54498887 54499508 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014295.1 MGP_CBAJ_G0012407.1 mouse_genomes_project 4 31799935 31800879 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0069427.1 MGP_CBAJ_G0028895.1 mouse_genomes_project 4 170891697 170893158 + MGP_CBAJ_P0069427 Aurkaip1 protein_coding protein_coding MGP_CBAJ_T0069428.1 MGP_CBAJ_G0028895.1 mouse_genomes_project 4 170891776 170893550 + MGP_CBAJ_P0069428 Aurkaip1 protein_coding protein_coding MGP_CBAJ_T0069429.1 MGP_CBAJ_G0028895.1 mouse_genomes_project 4 170892038 170892884 + Aurkaip1 protein_coding retained_intron MGP_CBAJ_T0069430.1 MGP_CBAJ_G0028895.1 mouse_genomes_project 4 170892078 170893481 + MGP_CBAJ_P0069430 Aurkaip1 protein_coding protein_coding MGP_CBAJ_T0069431.1 MGP_CBAJ_G0028895.1 mouse_genomes_project 4 170892084 170892948 + Aurkaip1 protein_coding processed_transcript MGP_CBAJ_T0069432.1 MGP_CBAJ_G0028895.1 mouse_genomes_project 4 170892088 170893451 + MGP_CBAJ_P0069432 Aurkaip1 protein_coding protein_coding MGP_CBAJ_T0068828.1 MGP_CBAJ_G0028786.1 mouse_genomes_project 4 162025766 162079020 - MGP_CBAJ_P0068828 Ptchd2 protein_coding protein_coding MGP_CBAJ_T0068829.1 MGP_CBAJ_G0028786.1 mouse_genomes_project 4 162049201 162051830 - Ptchd2 protein_coding retained_intron MGP_CBAJ_T0068830.1 MGP_CBAJ_G0028786.1 mouse_genomes_project 4 162050869 162052310 - Ptchd2 protein_coding processed_transcript MGP_CBAJ_T0066337.1 MGP_CBAJ_G0028204.1 mouse_genomes_project 4 115572138 115632022 + MGP_CBAJ_P0066337 Ndc1 protein_coding protein_coding MGP_CBAJ_T0066338.1 MGP_CBAJ_G0028204.1 mouse_genomes_project 4 115572234 115630009 + MGP_CBAJ_P0066338 Ndc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066339.1 MGP_CBAJ_G0028204.1 mouse_genomes_project 4 115572269 115631999 + MGP_CBAJ_P0066339 Ndc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066340.1 MGP_CBAJ_G0028204.1 mouse_genomes_project 4 115572406 115625510 + MGP_CBAJ_P0066340 Ndc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066341.1 MGP_CBAJ_G0028204.1 mouse_genomes_project 4 115591117 115596927 + Ndc1 protein_coding processed_transcript MGP_CBAJ_T0066342.1 MGP_CBAJ_G0028204.1 mouse_genomes_project 4 115591494 115600708 + Ndc1 protein_coding retained_intron MGP_CBAJ_T0066851.1 MGP_CBAJ_G0028306.1 mouse_genomes_project 4 125981386 125984511 - Btbd19 protein_coding processed_transcript MGP_CBAJ_T0066852.1 MGP_CBAJ_G0028306.1 mouse_genomes_project 4 125982050 125984566 - Btbd19 protein_coding processed_transcript MGP_CBAJ_T0066853.1 MGP_CBAJ_G0028306.1 mouse_genomes_project 4 125982348 125990754 - MGP_CBAJ_P0066853 Btbd19 protein_coding protein_coding MGP_CBAJ_T0066854.1 MGP_CBAJ_G0028306.1 mouse_genomes_project 4 125982824 125984540 - Btbd19 protein_coding processed_transcript MGP_CBAJ_T0066855.1 MGP_CBAJ_G0028306.1 mouse_genomes_project 4 125982879 125983439 - Btbd19 protein_coding retained_intron MGP_CBAJ_T0066856.1 MGP_CBAJ_G0028306.1 mouse_genomes_project 4 125982902 125984056 - Btbd19 protein_coding retained_intron MGP_CBAJ_T0066857.1 MGP_CBAJ_G0028306.1 mouse_genomes_project 4 125983486 125990861 - MGP_CBAJ_P0066857 Btbd19 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066858.1 MGP_CBAJ_G0028306.1 mouse_genomes_project 4 125983613 125990794 - MGP_CBAJ_P0066858 Btbd19 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066859.1 MGP_CBAJ_G0028306.1 mouse_genomes_project 4 125989117 125990307 - Btbd19 protein_coding processed_transcript MGP_CBAJ_T0100550.1 MGP_CBAJ_G0038805.1 mouse_genomes_project 4 77348069 77348196 + Gm25769 snoRNA snoRNA MGP_CBAJ_T0065590.1 MGP_CBAJ_G0028033.1 mouse_genomes_project 4 66774902 66813384 - MGP_CBAJ_P0065590 Akna protein_coding protein_coding MGP_CBAJ_T0065591.1 MGP_CBAJ_G0028033.1 mouse_genomes_project 4 66787681 66788961 - Akna protein_coding processed_transcript MGP_CBAJ_T0067234.1 MGP_CBAJ_G0028402.1 mouse_genomes_project 4 132850524 132898032 - MGP_CBAJ_P0067234 Bmp8a protein_coding protein_coding MGP_CBAJ_T0068503.1 MGP_CBAJ_G0028682.1 mouse_genomes_project 4 151765064 151791931 + MGP_CBAJ_P0068503 Aldh4a1 protein_coding protein_coding MGP_CBAJ_T0068504.1 MGP_CBAJ_G0028682.1 mouse_genomes_project 4 151765092 151791928 + Aldh4a1 protein_coding processed_transcript MGP_CBAJ_T0068505.1 MGP_CBAJ_G0028682.1 mouse_genomes_project 4 151765307 151777773 + Aldh4a1 protein_coding processed_transcript MGP_CBAJ_T0065231.1 MGP_CBAJ_G0027930.1 mouse_genomes_project 4 48526967 48577585 - MGP_CBAJ_P0065231 Anks6 protein_coding protein_coding MGP_CBAJ_T0065232.1 MGP_CBAJ_G0027930.1 mouse_genomes_project 4 48526987 48577585 - MGP_CBAJ_P0065232 Anks6 protein_coding protein_coding MGP_CBAJ_T0065233.1 MGP_CBAJ_G0027930.1 mouse_genomes_project 4 48528298 48537003 - Anks6 protein_coding processed_transcript MGP_CBAJ_T0065234.1 MGP_CBAJ_G0027930.1 mouse_genomes_project 4 48549707 48551392 - Anks6 protein_coding processed_transcript MGP_CBAJ_T0101914.1 MGP_CBAJ_G0039945.1 mouse_genomes_project 4 130891275 130893921 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0100586.1 MGP_CBAJ_G0038841.1 mouse_genomes_project 4 142877004 142877140 + Snora16a snoRNA snoRNA MGP_CBAJ_T0065003.1 MGP_CBAJ_G0027880.1 mouse_genomes_project 4 44586050 44587329 - MGP_CBAJ_P0065003 Msmp protein_coding protein_coding MGP_CBAJ_T0064691.1 MGP_CBAJ_G0027825.1 mouse_genomes_project 4 41867335 41877397 - MGP_CBAJ_P0064691 Nol6 protein_coding protein_coding MGP_CBAJ_T0064692.1 MGP_CBAJ_G0027825.1 mouse_genomes_project 4 41874239 41876208 - Nol6 protein_coding processed_transcript MGP_CBAJ_T0064693.1 MGP_CBAJ_G0027825.1 mouse_genomes_project 4 41874455 41876443 - Nol6 protein_coding processed_transcript MGP_CBAJ_T0064694.1 MGP_CBAJ_G0027825.1 mouse_genomes_project 4 41874787 41875663 - Nol6 protein_coding processed_transcript MGP_CBAJ_T0069250.1 MGP_CBAJ_G0028861.1 mouse_genomes_project 4 169203138 169216928 + MGP_CBAJ_P0069250 B230104I21Rik protein_coding protein_coding MGP_CBAJ_T0011441.1 MGP_CBAJ_G0009579.1 mouse_genomes_project 4 57198690 57198978 + Gm24628 misc_RNA misc_RNA MGP_CBAJ_T0065724.1 MGP_CBAJ_G0028064.1 mouse_genomes_project 4 88283063 88347788 - MGP_CBAJ_P0065724 Zdhhc21 protein_coding protein_coding MGP_CBAJ_T0065725.1 MGP_CBAJ_G0028064.1 mouse_genomes_project 4 88288372 88347676 - MGP_CBAJ_P0065725 Zdhhc21 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065726.1 MGP_CBAJ_G0028064.1 mouse_genomes_project 4 88290534 88348073 - MGP_CBAJ_P0065726 Zdhhc21 protein_coding protein_coding MGP_CBAJ_T0065727.1 MGP_CBAJ_G0028064.1 mouse_genomes_project 4 88324988 88339102 - MGP_CBAJ_P0065727 Zdhhc21 protein_coding protein_coding MGP_CBAJ_T0065728.1 MGP_CBAJ_G0028064.1 mouse_genomes_project 4 88327044 88347669 - Zdhhc21 protein_coding retained_intron MGP_CBAJ_T0065729.1 MGP_CBAJ_G0028064.1 mouse_genomes_project 4 88335904 88347688 - MGP_CBAJ_P0065729 Zdhhc21 protein_coding protein_coding MGP_CBAJ_T0067910.1 MGP_CBAJ_G0028545.1 mouse_genomes_project 4 143564301 143591491 - MGP_CBAJ_P0067910 protein_coding unknown_likely_coding MGP_CBAJ_T0067911.1 MGP_CBAJ_G0028545.1 mouse_genomes_project 4 143582400 143589945 - MGP_CBAJ_P0067911 protein_coding protein_coding MGP_CBAJ_T0069095.1 MGP_CBAJ_G0028837.1 mouse_genomes_project 4 166629891 166662190 - MGP_CBAJ_P0069095 Espn protein_coding protein_coding MGP_CBAJ_T0069096.1 MGP_CBAJ_G0028837.1 mouse_genomes_project 4 166629896 166662354 - MGP_CBAJ_P0069096 Espn protein_coding protein_coding MGP_CBAJ_T0069097.1 MGP_CBAJ_G0028837.1 mouse_genomes_project 4 166630417 166638526 - MGP_CBAJ_P0069097 Espn protein_coding protein_coding MGP_CBAJ_T0069098.1 MGP_CBAJ_G0028837.1 mouse_genomes_project 4 166630428 166662205 - MGP_CBAJ_P0069098 Espn protein_coding protein_coding MGP_CBAJ_T0069099.1 MGP_CBAJ_G0028837.1 mouse_genomes_project 4 166630430 166641470 - MGP_CBAJ_P0069099 Espn protein_coding protein_coding MGP_CBAJ_T0069100.1 MGP_CBAJ_G0028837.1 mouse_genomes_project 4 166630442 166641942 - Espn protein_coding processed_transcript MGP_CBAJ_T0069101.1 MGP_CBAJ_G0028837.1 mouse_genomes_project 4 166630681 166645887 - MGP_CBAJ_P0069101 Espn protein_coding protein_coding MGP_CBAJ_T0069102.1 MGP_CBAJ_G0028837.1 mouse_genomes_project 4 166630681 166645930 - MGP_CBAJ_P0069102 Espn protein_coding protein_coding MGP_CBAJ_T0069103.1 MGP_CBAJ_G0028837.1 mouse_genomes_project 4 166630681 166645930 - MGP_CBAJ_P0069103 Espn protein_coding protein_coding MGP_CBAJ_T0069104.1 MGP_CBAJ_G0028837.1 mouse_genomes_project 4 166630681 166645887 - MGP_CBAJ_P0069104 Espn protein_coding protein_coding MGP_CBAJ_T0069105.1 MGP_CBAJ_G0028837.1 mouse_genomes_project 4 166630681 166645887 - MGP_CBAJ_P0069105 Espn protein_coding protein_coding MGP_CBAJ_T0069106.1 MGP_CBAJ_G0028837.1 mouse_genomes_project 4 166630681 166645930 - MGP_CBAJ_P0069106 Espn protein_coding protein_coding MGP_CBAJ_T0069107.1 MGP_CBAJ_G0028837.1 mouse_genomes_project 4 166630681 166645930 - MGP_CBAJ_P0069107 Espn protein_coding protein_coding MGP_CBAJ_T0069108.1 MGP_CBAJ_G0028837.1 mouse_genomes_project 4 166630681 166645887 - MGP_CBAJ_P0069108 Espn protein_coding protein_coding MGP_CBAJ_T0069109.1 MGP_CBAJ_G0028837.1 mouse_genomes_project 4 166630692 166641446 - Espn protein_coding processed_transcript MGP_CBAJ_T0069110.1 MGP_CBAJ_G0028837.1 mouse_genomes_project 4 166632459 166641471 - Espn protein_coding processed_transcript MGP_CBAJ_T0069111.1 MGP_CBAJ_G0028837.1 mouse_genomes_project 4 166633274 166659027 - MGP_CBAJ_P0069111 Espn protein_coding protein_coding MGP_CBAJ_T0069112.1 MGP_CBAJ_G0028837.1 mouse_genomes_project 4 166637394 166641462 - Espn protein_coding processed_transcript MGP_CBAJ_T0069113.1 MGP_CBAJ_G0028837.1 mouse_genomes_project 4 166637742 166640835 - Espn protein_coding processed_transcript MGP_CBAJ_T0014430.1 MGP_CBAJ_G0012542.1 mouse_genomes_project 4 89053942 89054205 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017809.1 MGP_CBAJ_G0015300.1 mouse_genomes_project 4 101735891 101754326 - Gm12703 processed_transcript processed_transcript MGP_CBAJ_T0007830.1 MGP_CBAJ_G0006393.1 mouse_genomes_project 4 124885312 124886794 + Gm12951 lincRNA lincRNA MGP_CBAJ_T0010534.1 MGP_CBAJ_G0008672.1 mouse_genomes_project 4 171151895 171151965 - Mir200b miRNA miRNA MGP_CBAJ_T0014538.1 MGP_CBAJ_G0012650.1 mouse_genomes_project 4 128693987 128694401 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067388.1 MGP_CBAJ_G0028439.1 mouse_genomes_project 4 136052113 136081163 + MGP_CBAJ_P0067388 Col8a2 protein_coding protein_coding MGP_CBAJ_T0067389.1 MGP_CBAJ_G0028439.1 mouse_genomes_project 4 136066733 136076618 + MGP_CBAJ_P0067389 Col8a2 protein_coding protein_coding MGP_CBAJ_T0014251.1 MGP_CBAJ_G0012363.1 mouse_genomes_project 4 18664056 18665360 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004404.1 MGP_CBAJ_G0003829.1 mouse_genomes_project 4 107889966 107894521 - Ube2uos antisense antisense MGP_CBAJ_T0068501.1 MGP_CBAJ_G0028680.1 mouse_genomes_project 4 151708180 151762600 + MGP_CBAJ_P0068501 Iffo2 protein_coding protein_coding MGP_CBAJ_T0007775.1 MGP_CBAJ_G0006351.1 mouse_genomes_project 4 87478386 87522819 + Gm5860 lincRNA lincRNA MGP_CBAJ_T0007776.1 MGP_CBAJ_G0006351.1 mouse_genomes_project 4 87478828 87485611 + Gm5860 lincRNA lincRNA MGP_CBAJ_T0007777.1 MGP_CBAJ_G0006351.1 mouse_genomes_project 4 87478912 87520683 + Gm5860 lincRNA lincRNA MGP_CBAJ_T0069324.1 MGP_CBAJ_G0028875.1 mouse_genomes_project 4 170228888 170322743 - MGP_CBAJ_P0069324 Prkcz protein_coding protein_coding MGP_CBAJ_T0069325.1 MGP_CBAJ_G0028875.1 mouse_genomes_project 4 170230299 170340635 - MGP_CBAJ_P0069325 Prkcz protein_coding protein_coding MGP_CBAJ_T0069326.1 MGP_CBAJ_G0028875.1 mouse_genomes_project 4 170230678 170236914 - Prkcz protein_coding processed_transcript MGP_CBAJ_T0069327.1 MGP_CBAJ_G0028875.1 mouse_genomes_project 4 170239711 170241621 - Prkcz protein_coding processed_transcript MGP_CBAJ_T0069328.1 MGP_CBAJ_G0028875.1 mouse_genomes_project 4 170239751 170340472 - MGP_CBAJ_P0069328 Prkcz protein_coding protein_coding MGP_CBAJ_T0069329.1 MGP_CBAJ_G0028875.1 mouse_genomes_project 4 170258780 170322136 - MGP_CBAJ_P0069329 Prkcz protein_coding protein_coding MGP_CBAJ_T0069330.1 MGP_CBAJ_G0028875.1 mouse_genomes_project 4 170258783 170322233 - Prkcz protein_coding processed_transcript MGP_CBAJ_T0069331.1 MGP_CBAJ_G0028875.1 mouse_genomes_project 4 170262508 170272325 - Prkcz protein_coding processed_transcript MGP_CBAJ_T0069332.1 MGP_CBAJ_G0028875.1 mouse_genomes_project 4 170262583 170321711 - Prkcz protein_coding processed_transcript MGP_CBAJ_T0069333.1 MGP_CBAJ_G0028875.1 mouse_genomes_project 4 170335404 170340614 - MGP_CBAJ_P0069333 Prkcz protein_coding protein_coding MGP_CBAJ_T0067150.1 MGP_CBAJ_G0028376.1 mouse_genomes_project 4 129876880 129904328 + MGP_CBAJ_P0067150 Gm8439 protein_coding protein_coding MGP_CBAJ_T0004490.1 MGP_CBAJ_G0003897.1 mouse_genomes_project 4 154453165 154475158 + antisense antisense MGP_CBAJ_T0065763.1 MGP_CBAJ_G0028070.1 mouse_genomes_project 4 89086453 89424375 + MGP_CBAJ_P0065763 protein_coding protein_coding MGP_CBAJ_T0065764.1 MGP_CBAJ_G0028070.1 mouse_genomes_project 4 89086522 89118431 + MGP_CBAJ_P0065764 protein_coding protein_coding MGP_CBAJ_T0065765.1 MGP_CBAJ_G0028070.1 mouse_genomes_project 4 89086547 89424290 + MGP_CBAJ_P0065765 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065766.1 MGP_CBAJ_G0028070.1 mouse_genomes_project 4 89099484 89424152 + MGP_CBAJ_P0065766 protein_coding unknown_likely_coding MGP_CBAJ_T0065767.1 MGP_CBAJ_G0028070.1 mouse_genomes_project 4 89110074 89126395 + protein_coding processed_transcript MGP_CBAJ_T0065768.1 MGP_CBAJ_G0028070.1 mouse_genomes_project 4 89275446 89359701 + protein_coding processed_transcript MGP_CBAJ_T0014223.1 MGP_CBAJ_G0012335.1 mouse_genomes_project 4 11672438 11673647 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007857.1 MGP_CBAJ_G0006411.1 mouse_genomes_project 4 138699339 138700316 + Gm12958 lincRNA lincRNA MGP_CBAJ_T0007828.1 MGP_CBAJ_G0006391.1 mouse_genomes_project 4 123015542 123022310 + Gm12829 lincRNA lincRNA MGP_CBAJ_T0001368.1 MGP_CBAJ_G0001294.1 mouse_genomes_project 4 10004382 10087220 + TEC TEC MGP_CBAJ_T0014248.1 MGP_CBAJ_G0012360.1 mouse_genomes_project 4 17084412 17085350 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014236.1 MGP_CBAJ_G0012348.1 mouse_genomes_project 4 14161323 14162384 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014474.1 MGP_CBAJ_G0012586.1 mouse_genomes_project 4 107937555 107938483 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014497.1 MGP_CBAJ_G0012609.1 mouse_genomes_project 4 115990696 115991122 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0068344.1 MGP_CBAJ_G0028648.1 mouse_genomes_project 4 149435607 149501334 + Rap1gap protein_coding processed_transcript MGP_CBAJ_T0068345.1 MGP_CBAJ_G0028648.1 mouse_genomes_project 4 149435635 149496650 + Rap1gap protein_coding retained_intron MGP_CBAJ_T0068346.1 MGP_CBAJ_G0028648.1 mouse_genomes_project 4 149454199 149505560 + MGP_CBAJ_P0068346 Rap1gap protein_coding protein_coding MGP_CBAJ_T0068347.1 MGP_CBAJ_G0028648.1 mouse_genomes_project 4 149454199 149500554 + MGP_CBAJ_P0068347 Rap1gap protein_coding protein_coding MGP_CBAJ_T0068348.1 MGP_CBAJ_G0028648.1 mouse_genomes_project 4 149454199 149517512 + MGP_CBAJ_P0068348 Rap1gap protein_coding protein_coding MGP_CBAJ_T0068349.1 MGP_CBAJ_G0028648.1 mouse_genomes_project 4 149459383 149517511 + MGP_CBAJ_P0068349 Rap1gap protein_coding protein_coding MGP_CBAJ_T0068350.1 MGP_CBAJ_G0028648.1 mouse_genomes_project 4 149465141 149500585 + Rap1gap protein_coding processed_transcript MGP_CBAJ_T0068351.1 MGP_CBAJ_G0028648.1 mouse_genomes_project 4 149492428 149517512 + MGP_CBAJ_P0068351 Rap1gap protein_coding protein_coding MGP_CBAJ_T0068352.1 MGP_CBAJ_G0028648.1 mouse_genomes_project 4 149506475 149516009 + MGP_CBAJ_P0068352 Rap1gap protein_coding protein_coding MGP_CBAJ_T0068353.1 MGP_CBAJ_G0028648.1 mouse_genomes_project 4 149511597 149517512 + Rap1gap protein_coding retained_intron MGP_CBAJ_T0068354.1 MGP_CBAJ_G0028648.1 mouse_genomes_project 4 149512935 149514662 + Rap1gap protein_coding retained_intron MGP_CBAJ_T0068355.1 MGP_CBAJ_G0028648.1 mouse_genomes_project 4 149515366 149516587 + Rap1gap protein_coding retained_intron MGP_CBAJ_T0068356.1 MGP_CBAJ_G0028648.1 mouse_genomes_project 4 149515831 149516470 + Rap1gap protein_coding retained_intron MGP_CBAJ_T0068357.1 MGP_CBAJ_G0028648.1 mouse_genomes_project 4 149515861 149517353 + Rap1gap protein_coding retained_intron MGP_CBAJ_T0068358.1 MGP_CBAJ_G0028649.1 mouse_genomes_project 4 149529216 149597499 - MGP_CBAJ_P0068358 Alpl protein_coding protein_coding MGP_CBAJ_T0068359.1 MGP_CBAJ_G0028649.1 mouse_genomes_project 4 149533930 149534658 - Alpl protein_coding processed_transcript MGP_CBAJ_T0068360.1 MGP_CBAJ_G0028649.1 mouse_genomes_project 4 149540042 149557106 - MGP_CBAJ_P0068360 Alpl protein_coding protein_coding MGP_CBAJ_T0068361.1 MGP_CBAJ_G0028649.1 mouse_genomes_project 4 149544099 149580539 - MGP_CBAJ_P0068361 Alpl protein_coding protein_coding MGP_CBAJ_T0068362.1 MGP_CBAJ_G0028649.1 mouse_genomes_project 4 149545312 149583715 - MGP_CBAJ_P0068362 Alpl protein_coding protein_coding MGP_CBAJ_T0068363.1 MGP_CBAJ_G0028649.1 mouse_genomes_project 4 149545856 149597345 - Alpl protein_coding processed_transcript MGP_CBAJ_T0068364.1 MGP_CBAJ_G0028649.1 mouse_genomes_project 4 149548893 149564527 - Alpl protein_coding processed_transcript MGP_CBAJ_T0068365.1 MGP_CBAJ_G0028649.1 mouse_genomes_project 4 149548893 149564732 - Alpl protein_coding processed_transcript MGP_CBAJ_T0066995.1 MGP_CBAJ_G0028331.1 mouse_genomes_project 4 127462193 127466659 - MGP_CBAJ_P0066995 Cdc20 protein_coding protein_coding MGP_CBAJ_T0066996.1 MGP_CBAJ_G0028331.1 mouse_genomes_project 4 127462397 127465885 - MGP_CBAJ_P0066996 Cdc20 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066997.1 MGP_CBAJ_G0028331.1 mouse_genomes_project 4 127462840 127465128 - Cdc20 protein_coding retained_intron MGP_CBAJ_T0004354.1 MGP_CBAJ_G0003792.1 mouse_genomes_project 4 42319630 42323866 + antisense antisense MGP_CBAJ_T0068092.1 MGP_CBAJ_G0028584.1 mouse_genomes_project 4 145314679 145332336 + MGP_CBAJ_P0068092 Trim63 protein_coding protein_coding MGP_CBAJ_T0068093.1 MGP_CBAJ_G0028584.1 mouse_genomes_project 4 145314681 145332314 + MGP_CBAJ_P0068093 Trim63 protein_coding protein_coding MGP_CBAJ_T0068094.1 MGP_CBAJ_G0028584.1 mouse_genomes_project 4 145314771 145316937 + Trim63 protein_coding retained_intron MGP_CBAJ_T0068095.1 MGP_CBAJ_G0028584.1 mouse_genomes_project 4 145319547 145332333 + Trim63 protein_coding processed_transcript MGP_CBAJ_T0068831.1 MGP_CBAJ_G0028787.1 mouse_genomes_project 4 162261047 162271511 - MGP_CBAJ_P0068831 Ubiad1 protein_coding protein_coding MGP_CBAJ_T0068832.1 MGP_CBAJ_G0028787.1 mouse_genomes_project 4 162263042 162271501 - Ubiad1 protein_coding processed_transcript MGP_CBAJ_T0011439.1 MGP_CBAJ_G0009577.1 mouse_genomes_project 4 56139689 56139988 - Gm25445 misc_RNA misc_RNA MGP_CBAJ_T0014562.1 MGP_CBAJ_G0012674.1 mouse_genomes_project 4 136377911 136378212 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007705.1 MGP_CBAJ_G0006289.1 mouse_genomes_project 4 10494607 10516114 + Gm11820 lincRNA lincRNA MGP_CBAJ_T0065922.1 MGP_CBAJ_G0028114.1 mouse_genomes_project 4 101284600 101347212 + MGP_CBAJ_P0065922 Ift74 protein_coding protein_coding MGP_CBAJ_T0065923.1 MGP_CBAJ_G0028114.1 mouse_genomes_project 4 101284600 101387244 + MGP_CBAJ_P0065923 Ift74 protein_coding protein_coding MGP_CBAJ_T0065926.1 MGP_CBAJ_G0028114.1 mouse_genomes_project 4 101364970 101376901 + Ift74 protein_coding processed_transcript MGP_CBAJ_T0065587.1 MGP_CBAJ_G0028031.1 mouse_genomes_project 4 66756641 66769532 + MGP_CBAJ_P0065587 Orm3 protein_coding protein_coding MGP_CBAJ_T0068553.1 MGP_CBAJ_G0028696.1 mouse_genomes_project 4 153350179 153355576 + MGP_CBAJ_P0068553 Mfap2 protein_coding protein_coding MGP_CBAJ_T0068554.1 MGP_CBAJ_G0028696.1 mouse_genomes_project 4 153350398 153354774 + Mfap2 protein_coding processed_transcript MGP_CBAJ_T0068555.1 MGP_CBAJ_G0028696.1 mouse_genomes_project 4 153350405 153355746 + MGP_CBAJ_P0068555 Mfap2 protein_coding protein_coding MGP_CBAJ_T0010484.1 MGP_CBAJ_G0008622.1 mouse_genomes_project 4 108804206 108804289 - Mir101a miRNA miRNA MGP_CBAJ_T0065868.1 MGP_CBAJ_G0028088.1 mouse_genomes_project 4 94658825 94659395 - MGP_CBAJ_P0065868 Ifna14 protein_coding protein_coding MGP_CBAJ_T0014542.1 MGP_CBAJ_G0012654.1 mouse_genomes_project 4 130244348 130244786 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0065379.1 MGP_CBAJ_G0027973.1 mouse_genomes_project 4 59462959 59464398 - MGP_CBAJ_P0065379 Actl7b protein_coding protein_coding MGP_CBAJ_T0100508.1 MGP_CBAJ_G0038763.1 mouse_genomes_project 4 339653 339721 - Gm24016 snoRNA snoRNA MGP_CBAJ_T0068248.1 MGP_CBAJ_G0028621.1 mouse_genomes_project 4 147388503 147389041 - Rpl11 protein_coding processed_transcript MGP_CBAJ_T0068249.1 MGP_CBAJ_G0028621.1 mouse_genomes_project 4 147388503 147419704 - Rpl11 protein_coding processed_transcript MGP_CBAJ_T0068250.1 MGP_CBAJ_G0028621.1 mouse_genomes_project 4 147416748 147420412 - MGP_CBAJ_P0068250 Rpl11 protein_coding protein_coding MGP_CBAJ_T0068251.1 MGP_CBAJ_G0028621.1 mouse_genomes_project 4 147416964 147417544 - Rpl11 protein_coding processed_transcript MGP_CBAJ_T0068252.1 MGP_CBAJ_G0028621.1 mouse_genomes_project 4 147417007 147420015 - Rpl11 protein_coding processed_transcript MGP_CBAJ_T0068253.1 MGP_CBAJ_G0028621.1 mouse_genomes_project 4 147417297 147420109 - MGP_CBAJ_P0068253 Rpl11 protein_coding protein_coding MGP_CBAJ_T0068254.1 MGP_CBAJ_G0028621.1 mouse_genomes_project 4 147417349 147419773 - Rpl11 protein_coding processed_transcript MGP_CBAJ_T0068255.1 MGP_CBAJ_G0028621.1 mouse_genomes_project 4 147417650 147419725 - Rpl11 protein_coding processed_transcript MGP_CBAJ_T0068256.1 MGP_CBAJ_G0028621.1 mouse_genomes_project 4 147418045 147419735 - Rpl11 protein_coding processed_transcript MGP_CBAJ_T0068257.1 MGP_CBAJ_G0028621.1 mouse_genomes_project 4 147418258 147420447 - Rpl11 protein_coding processed_transcript MGP_CBAJ_T0004538.1 MGP_CBAJ_G0003931.1 mouse_genomes_project 4 171115787 171117605 - Gm16008 antisense antisense MGP_CBAJ_T0004539.1 MGP_CBAJ_G0003931.1 mouse_genomes_project 4 171117507 171125227 - Gm16008 antisense antisense MGP_CBAJ_T0004540.1 MGP_CBAJ_G0003931.1 mouse_genomes_project 4 171119844 171125206 - Gm16008 antisense antisense MGP_CBAJ_T0099272.1 MGP_CBAJ_G0037527.1 mouse_genomes_project 4 92329314 92329388 + Gm26017 snRNA snRNA MGP_CBAJ_T0001381.1 MGP_CBAJ_G0001307.1 mouse_genomes_project 4 132627145 132636467 - TEC TEC MGP_CBAJ_T0001382.1 MGP_CBAJ_G0001307.1 mouse_genomes_project 4 132631648 132636467 - TEC TEC MGP_CBAJ_T0068152.1 MGP_CBAJ_G0028600.1 mouse_genomes_project 4 146046968 146053605 + MGP_CBAJ_P0068152 Syf2 protein_coding protein_coding MGP_CBAJ_T0068153.1 MGP_CBAJ_G0028600.1 mouse_genomes_project 4 146046972 146051130 + Syf2 protein_coding retained_intron MGP_CBAJ_T0068154.1 MGP_CBAJ_G0028600.1 mouse_genomes_project 4 146047080 146052159 + Syf2 protein_coding retained_intron MGP_CBAJ_T0068267.1 MGP_CBAJ_G0028626.1 mouse_genomes_project 4 147691206 147696854 + MGP_CBAJ_P0068267 Zfp46 protein_coding protein_coding MGP_CBAJ_T0068268.1 MGP_CBAJ_G0028626.1 mouse_genomes_project 4 147691298 147696611 + MGP_CBAJ_P0068268 Zfp46 protein_coding protein_coding MGP_CBAJ_T0068269.1 MGP_CBAJ_G0028626.1 mouse_genomes_project 4 147691592 147692997 + Zfp46 protein_coding processed_transcript MGP_CBAJ_T0068270.1 MGP_CBAJ_G0028626.1 mouse_genomes_project 4 147692588 147700489 + MGP_CBAJ_P0068270 Zfp46 protein_coding protein_coding MGP_CBAJ_T0068271.1 MGP_CBAJ_G0028626.1 mouse_genomes_project 4 147692625 147696775 + MGP_CBAJ_P0068271 Zfp46 protein_coding protein_coding MGP_CBAJ_T0069175.1 MGP_CBAJ_G0028848.1 mouse_genomes_project 4 168129587 168265732 - MGP_CBAJ_P0069175 Ajap1 protein_coding protein_coding MGP_CBAJ_T0069176.1 MGP_CBAJ_G0028848.1 mouse_genomes_project 4 168130591 168265100 - MGP_CBAJ_P0069176 Ajap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068235.1 MGP_CBAJ_G0028618.1 mouse_genomes_project 4 147316979 147321386 - MGP_CBAJ_P0068235 Lypla2 protein_coding protein_coding MGP_CBAJ_T0068236.1 MGP_CBAJ_G0028618.1 mouse_genomes_project 4 147316979 147320689 - MGP_CBAJ_P0068236 Lypla2 protein_coding protein_coding MGP_CBAJ_T0068237.1 MGP_CBAJ_G0028618.1 mouse_genomes_project 4 147317456 147319226 - Lypla2 protein_coding retained_intron MGP_CBAJ_T0068238.1 MGP_CBAJ_G0028618.1 mouse_genomes_project 4 147317519 147321348 - Lypla2 protein_coding retained_intron MGP_CBAJ_T0068239.1 MGP_CBAJ_G0028618.1 mouse_genomes_project 4 147319405 147321363 - Lypla2 protein_coding retained_intron MGP_CBAJ_T0065881.1 MGP_CBAJ_G0028097.1 mouse_genomes_project 4 94933316 94933889 + MGP_CBAJ_P0065881 Ifna7 protein_coding protein_coding MGP_CBAJ_T0011434.1 MGP_CBAJ_G0009572.1 mouse_genomes_project 4 44987214 44987291 + Gm27265 misc_RNA misc_RNA MGP_CBAJ_T0069068.1 MGP_CBAJ_G0028830.1 mouse_genomes_project 4 166483353 166489979 - MGP_CBAJ_P0069068 Phf13 protein_coding protein_coding MGP_CBAJ_T0004401.1 MGP_CBAJ_G0003826.1 mouse_genomes_project 4 105859032 105867023 + Kank4os antisense antisense MGP_CBAJ_T0068201.1 MGP_CBAJ_G0028609.1 mouse_genomes_project 4 146982005 147008079 + MGP_CBAJ_P0068201 Ifnlr1 protein_coding protein_coding MGP_CBAJ_T0068707.1 MGP_CBAJ_G0028738.1 mouse_genomes_project 4 157041219 157045852 + MGP_CBAJ_P0068707 protein_coding protein_coding MGP_CBAJ_T0066700.1 MGP_CBAJ_G0028278.1 mouse_genomes_project 4 124729192 124748941 - MGP_CBAJ_P0066700 Nsun4 protein_coding protein_coding MGP_CBAJ_T0066701.1 MGP_CBAJ_G0028278.1 mouse_genomes_project 4 124729355 124743539 - MGP_CBAJ_P0066701 Nsun4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066702.1 MGP_CBAJ_G0028278.1 mouse_genomes_project 4 124730257 124748445 - MGP_CBAJ_P0066702 Nsun4 protein_coding protein_coding MGP_CBAJ_T0066703.1 MGP_CBAJ_G0028278.1 mouse_genomes_project 4 124736444 124741985 - Nsun4 protein_coding processed_transcript MGP_CBAJ_T0066704.1 MGP_CBAJ_G0028278.1 mouse_genomes_project 4 124740923 124743408 - Nsun4 protein_coding retained_intron MGP_CBAJ_T0066705.1 MGP_CBAJ_G0028278.1 mouse_genomes_project 4 124743508 124744445 - Nsun4 protein_coding processed_transcript MGP_CBAJ_T0066860.1 MGP_CBAJ_G0028307.1 mouse_genomes_project 4 125991926 125993484 + MGP_CBAJ_P0066860 Tctex1d4 protein_coding protein_coding MGP_CBAJ_T0066861.1 MGP_CBAJ_G0028307.1 mouse_genomes_project 4 125991945 125993885 + MGP_CBAJ_P0066861 Tctex1d4 protein_coding protein_coding MGP_CBAJ_T0066862.1 MGP_CBAJ_G0028307.1 mouse_genomes_project 4 125992306 125993663 + MGP_CBAJ_P0066862 Tctex1d4 protein_coding protein_coding MGP_CBAJ_T0007748.1 MGP_CBAJ_G0006327.1 mouse_genomes_project 4 57662947 57829628 - Gm12514 lincRNA lincRNA MGP_CBAJ_T0007749.1 MGP_CBAJ_G0006327.1 mouse_genomes_project 4 57663184 57667242 - Gm12514 lincRNA lincRNA MGP_CBAJ_T0004438.1 MGP_CBAJ_G0003856.1 mouse_genomes_project 4 128392954 128397371 - Gm12927 antisense antisense MGP_CBAJ_T0014523.1 MGP_CBAJ_G0012635.1 mouse_genomes_project 4 125665254 125665701 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007912.1 MGP_CBAJ_G0006449.1 mouse_genomes_project 4 152924086 152928978 + Gm13025 lincRNA lincRNA MGP_CBAJ_T0065896.1 MGP_CBAJ_G0028108.1 mouse_genomes_project 4 97598627 97731427 - MGP_CBAJ_P0065896 Elavl2 protein_coding protein_coding MGP_CBAJ_T0065897.1 MGP_CBAJ_G0028108.1 mouse_genomes_project 4 97598627 97731392 - MGP_CBAJ_P0065897 Elavl2 protein_coding protein_coding MGP_CBAJ_T0065898.1 MGP_CBAJ_G0028108.1 mouse_genomes_project 4 97598627 97731412 - MGP_CBAJ_P0065898 Elavl2 protein_coding protein_coding MGP_CBAJ_T0065899.1 MGP_CBAJ_G0028108.1 mouse_genomes_project 4 97598627 97760983 - MGP_CBAJ_P0065899 Elavl2 protein_coding protein_coding MGP_CBAJ_T0065900.1 MGP_CBAJ_G0028108.1 mouse_genomes_project 4 97600944 97602447 - Elavl2 protein_coding retained_intron MGP_CBAJ_T0065901.1 MGP_CBAJ_G0028108.1 mouse_genomes_project 4 97601104 97665799 - MGP_CBAJ_P0065901 Elavl2 protein_coding protein_coding MGP_CBAJ_T0065902.1 MGP_CBAJ_G0028108.1 mouse_genomes_project 4 97601104 97664032 - MGP_CBAJ_P0065902 Elavl2 protein_coding protein_coding MGP_CBAJ_T0065903.1 MGP_CBAJ_G0028108.1 mouse_genomes_project 4 97606530 97735662 - Elavl2 protein_coding retained_intron MGP_CBAJ_T0065904.1 MGP_CBAJ_G0028108.1 mouse_genomes_project 4 97611963 97716010 - MGP_CBAJ_P0065904 Elavl2 protein_coding protein_coding MGP_CBAJ_T0065905.1 MGP_CBAJ_G0028108.1 mouse_genomes_project 4 97661062 97732388 - MGP_CBAJ_P0065905 Elavl2 protein_coding protein_coding MGP_CBAJ_T0065906.1 MGP_CBAJ_G0028108.1 mouse_genomes_project 4 97661156 97731314 - MGP_CBAJ_P0065906 Elavl2 protein_coding protein_coding MGP_CBAJ_T0065907.1 MGP_CBAJ_G0028108.1 mouse_genomes_project 4 97739782 97760975 - Elavl2 protein_coding processed_transcript MGP_CBAJ_T0065908.1 MGP_CBAJ_G0028108.1 mouse_genomes_project 4 97760893 97764331 - Elavl2 protein_coding processed_transcript MGP_CBAJ_T0014399.1 MGP_CBAJ_G0012511.1 mouse_genomes_project 4 77102026 77102624 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011456.1 MGP_CBAJ_G0009594.1 mouse_genomes_project 4 133057359 133057465 + Gm23548 misc_RNA misc_RNA MGP_CBAJ_T0067776.1 MGP_CBAJ_G0028518.1 mouse_genomes_project 4 141319241 141334284 + MGP_CBAJ_P0067776 Matn1 protein_coding protein_coding MGP_CBAJ_T0067777.1 MGP_CBAJ_G0028518.1 mouse_genomes_project 4 141319280 141333335 + MGP_CBAJ_P0067777 Matn1 protein_coding unknown_likely_coding MGP_CBAJ_T0010479.1 MGP_CBAJ_G0008617.1 mouse_genomes_project 4 97732641 97732721 - Mir6402 miRNA miRNA MGP_CBAJ_T0069411.1 MGP_CBAJ_G0028890.1 mouse_genomes_project 4 170817298 170823873 - MGP_CBAJ_P0069411 Vwa1 protein_coding protein_coding MGP_CBAJ_T0007931.1 MGP_CBAJ_G0006468.1 mouse_genomes_project 4 169549521 169550140 - Gm27202 lincRNA lincRNA MGP_CBAJ_T0066223.1 MGP_CBAJ_G0028185.1 mouse_genomes_project 4 114644845 114672832 + MGP_CBAJ_P0066223 Dhcr24 protein_coding protein_coding MGP_CBAJ_T0066612.1 MGP_CBAJ_G0028252.1 mouse_genomes_project 4 122717803 122938845 + MGP_CBAJ_P0066612 Trabd2b protein_coding protein_coding MGP_CBAJ_T0004519.1 MGP_CBAJ_G0003918.1 mouse_genomes_project 4 165783614 165786725 + 4930589P08Rik antisense antisense MGP_CBAJ_T0065301.1 MGP_CBAJ_G0027950.1 mouse_genomes_project 4 51449237 51461073 - MGP_CBAJ_P0065301 Aldob protein_coding unknown_likely_coding MGP_CBAJ_T0065302.1 MGP_CBAJ_G0027950.1 mouse_genomes_project 4 51449478 51451311 - Aldob protein_coding processed_transcript MGP_CBAJ_T0065303.1 MGP_CBAJ_G0027950.1 mouse_genomes_project 4 51450981 51452331 - Aldob protein_coding processed_transcript MGP_CBAJ_T0064202.1 MGP_CBAJ_G0027710.1 mouse_genomes_project 4 3116159 3148722 + MGP_CBAJ_P0064202 Sdcbp protein_coding protein_coding MGP_CBAJ_T0064203.1 MGP_CBAJ_G0027710.1 mouse_genomes_project 4 3116186 3148093 + MGP_CBAJ_P0064203 Sdcbp protein_coding protein_coding MGP_CBAJ_T0064204.1 MGP_CBAJ_G0027710.1 mouse_genomes_project 4 3116217 3124638 + Sdcbp protein_coding processed_transcript MGP_CBAJ_T0064205.1 MGP_CBAJ_G0027710.1 mouse_genomes_project 4 3116218 3145554 + MGP_CBAJ_P0064205 Sdcbp protein_coding protein_coding MGP_CBAJ_T0064206.1 MGP_CBAJ_G0027710.1 mouse_genomes_project 4 3116221 3135979 + Sdcbp protein_coding processed_transcript MGP_CBAJ_T0064207.1 MGP_CBAJ_G0027710.1 mouse_genomes_project 4 3116222 3136814 + MGP_CBAJ_P0064207 Sdcbp protein_coding protein_coding MGP_CBAJ_T0064208.1 MGP_CBAJ_G0027710.1 mouse_genomes_project 4 3116222 3160843 + MGP_CBAJ_P0064208 Sdcbp protein_coding protein_coding MGP_CBAJ_T0064209.1 MGP_CBAJ_G0027710.1 mouse_genomes_project 4 3127350 3145438 + MGP_CBAJ_P0064209 Sdcbp protein_coding protein_coding MGP_CBAJ_T0067021.1 MGP_CBAJ_G0028340.1 mouse_genomes_project 4 127753525 127754464 + MGP_CBAJ_P0067021 Olfr1341 protein_coding protein_coding MGP_CBAJ_T0007815.1 MGP_CBAJ_G0006383.1 mouse_genomes_project 4 114572337 114579857 - Tmem61 lincRNA lincRNA MGP_CBAJ_T0007816.1 MGP_CBAJ_G0006383.1 mouse_genomes_project 4 114572569 114576628 - Tmem61 lincRNA lincRNA MGP_CBAJ_T0004464.1 MGP_CBAJ_G0003876.1 mouse_genomes_project 4 144299006 144302210 - Gm13257 antisense antisense MGP_CBAJ_T0007728.1 MGP_CBAJ_G0006311.1 mouse_genomes_project 4 41390857 41393102 - Gm6297 lincRNA lincRNA MGP_CBAJ_T0064798.1 MGP_CBAJ_G0027848.1 mouse_genomes_project 4 42604270 42606010 - MGP_CBAJ_P0064798 protein_coding protein_coding MGP_CBAJ_T0064799.1 MGP_CBAJ_G0027848.1 mouse_genomes_project 4 42604270 42604963 - MGP_CBAJ_P0064799 protein_coding protein_coding MGP_CBAJ_T0007841.1 MGP_CBAJ_G0006403.1 mouse_genomes_project 4 134066481 134070947 - 1700057H15Rik lincRNA lincRNA MGP_CBAJ_T0007842.1 MGP_CBAJ_G0006403.1 mouse_genomes_project 4 134066481 134112914 - 1700057H15Rik lincRNA lincRNA MGP_CBAJ_T0007843.1 MGP_CBAJ_G0006403.1 mouse_genomes_project 4 134111520 134151202 - 1700057H15Rik lincRNA lincRNA MGP_CBAJ_T0007844.1 MGP_CBAJ_G0006403.1 mouse_genomes_project 4 134111853 134112904 - 1700057H15Rik lincRNA lincRNA MGP_CBAJ_T0014346.1 MGP_CBAJ_G0012458.1 mouse_genomes_project 4 50718982 50719320 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0066026.1 MGP_CBAJ_G0028137.1 mouse_genomes_project 4 105814493 105885659 - MGP_CBAJ_P0066026 Kank4 protein_coding protein_coding MGP_CBAJ_T0066027.1 MGP_CBAJ_G0028137.1 mouse_genomes_project 4 105815900 105831109 - Kank4 protein_coding processed_transcript MGP_CBAJ_T0064803.1 MGP_CBAJ_G0027850.1 mouse_genomes_project 4 42607895 42608864 - protein_coding processed_transcript MGP_CBAJ_T0064805.1 MGP_CBAJ_G0027850.1 mouse_genomes_project 4 42607924 42608991 - protein_coding processed_transcript MGP_CBAJ_T0064806.1 MGP_CBAJ_G0027850.1 mouse_genomes_project 4 42607939 42608969 - protein_coding processed_transcript MGP_CBAJ_T0064811.1 MGP_CBAJ_G0027850.1 mouse_genomes_project 4 42607961 42609018 - MGP_CBAJ_P0064811 protein_coding protein_coding MGP_CBAJ_T0064812.1 MGP_CBAJ_G0027850.1 mouse_genomes_project 4 42607965 42608873 - protein_coding processed_transcript MGP_CBAJ_T0100592.1 MGP_CBAJ_G0038847.1 mouse_genomes_project 4 145128151 145128239 - Gm27619 snoRNA snoRNA MGP_CBAJ_T0067823.1 MGP_CBAJ_G0028526.1 mouse_genomes_project 4 142714574 142753206 - MGP_CBAJ_P0067823 protein_coding protein_coding MGP_CBAJ_T0067824.1 MGP_CBAJ_G0028526.1 mouse_genomes_project 4 142716823 142752994 - MGP_CBAJ_P0067824 protein_coding protein_coding MGP_CBAJ_T0068218.1 MGP_CBAJ_G0028615.1 mouse_genomes_project 4 147256662 147276019 + MGP_CBAJ_P0068218 Fuca1 protein_coding protein_coding MGP_CBAJ_T0068219.1 MGP_CBAJ_G0028615.1 mouse_genomes_project 4 147265757 147270628 + Fuca1 protein_coding processed_transcript MGP_CBAJ_T0068220.1 MGP_CBAJ_G0028615.1 mouse_genomes_project 4 147268852 147275197 + Fuca1 protein_coding processed_transcript MGP_CBAJ_T0068221.1 MGP_CBAJ_G0028615.1 mouse_genomes_project 4 147268979 147271197 + Fuca1 protein_coding processed_transcript MGP_CBAJ_T0068222.1 MGP_CBAJ_G0028615.1 mouse_genomes_project 4 147272551 147275197 + Fuca1 protein_coding processed_transcript MGP_CBAJ_T0064542.1 MGP_CBAJ_G0027787.1 mouse_genomes_project 4 32753939 32777523 + MGP_CBAJ_P0064542 Ube2j1 protein_coding protein_coding MGP_CBAJ_T0064543.1 MGP_CBAJ_G0027787.1 mouse_genomes_project 4 32754051 32770409 + MGP_CBAJ_P0064543 Ube2j1 protein_coding protein_coding MGP_CBAJ_T0064544.1 MGP_CBAJ_G0027787.1 mouse_genomes_project 4 32759247 32777523 + MGP_CBAJ_P0064544 Ube2j1 protein_coding protein_coding MGP_CBAJ_T0064748.1 MGP_CBAJ_G0027840.1 mouse_genomes_project 4 42541522 42549895 - MGP_CBAJ_P0064748 Dctn3 protein_coding protein_coding MGP_CBAJ_T0064749.1 MGP_CBAJ_G0027840.1 mouse_genomes_project 4 42541522 42549888 - MGP_CBAJ_P0064749 Dctn3 protein_coding protein_coding MGP_CBAJ_T0064750.1 MGP_CBAJ_G0027840.1 mouse_genomes_project 4 42546495 42549862 - Dctn3 protein_coding processed_transcript MGP_CBAJ_T0064421.1 MGP_CBAJ_G0027763.1 mouse_genomes_project 4 20101882 20112248 - MGP_CBAJ_P0064421 Tstd3 protein_coding protein_coding MGP_CBAJ_T0014564.1 MGP_CBAJ_G0012676.1 mouse_genomes_project 4 136839936 136840101 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010468.1 MGP_CBAJ_G0008606.1 mouse_genomes_project 4 49872210 49872307 - Mir1958 miRNA miRNA MGP_CBAJ_T0068474.1 MGP_CBAJ_G0028676.1 mouse_genomes_project 4 151418173 151426441 + MGP_CBAJ_P0068474 Akr7a5 protein_coding protein_coding MGP_CBAJ_T0068475.1 MGP_CBAJ_G0028676.1 mouse_genomes_project 4 151424594 151425423 + Akr7a5 protein_coding processed_transcript MGP_CBAJ_T0066108.1 MGP_CBAJ_G0028156.1 mouse_genomes_project 4 108973192 109097275 + MGP_CBAJ_P0066108 Dnajc6 protein_coding protein_coding MGP_CBAJ_T0066109.1 MGP_CBAJ_G0028156.1 mouse_genomes_project 4 108984316 109133461 + MGP_CBAJ_P0066109 Dnajc6 protein_coding protein_coding MGP_CBAJ_T0066110.1 MGP_CBAJ_G0028156.1 mouse_genomes_project 4 108984421 109102023 + MGP_CBAJ_P0066110 Dnajc6 protein_coding protein_coding MGP_CBAJ_T0066111.1 MGP_CBAJ_G0028156.1 mouse_genomes_project 4 108984475 109085703 + Dnajc6 protein_coding processed_transcript MGP_CBAJ_T0066112.1 MGP_CBAJ_G0028156.1 mouse_genomes_project 4 109027539 109133469 + MGP_CBAJ_P0066112 Dnajc6 protein_coding protein_coding MGP_CBAJ_T0100546.1 MGP_CBAJ_G0038801.1 mouse_genomes_project 4 66294622 66294756 + Gm25391 snoRNA snoRNA MGP_CBAJ_T0069522.1 MGP_CBAJ_G0028912.1 mouse_genomes_project 4 171314993 171316388 - MGP_CBAJ_P0069522 Isg15 protein_coding protein_coding MGP_CBAJ_T0067832.1 MGP_CBAJ_G0028528.1 mouse_genomes_project 4 142828400 142857187 + MGP_CBAJ_P0067832 Taf12 protein_coding protein_coding MGP_CBAJ_T0067833.1 MGP_CBAJ_G0028528.1 mouse_genomes_project 4 142828438 142830814 + Taf12 protein_coding processed_transcript MGP_CBAJ_T0067834.1 MGP_CBAJ_G0028528.1 mouse_genomes_project 4 142828441 142854231 + MGP_CBAJ_P0067834 Taf12 protein_coding protein_coding MGP_CBAJ_T0064221.1 MGP_CBAJ_G0027712.1 mouse_genomes_project 4 3461037 3784316 - MGP_CBAJ_P0064221 Tox protein_coding protein_coding MGP_CBAJ_T0064222.1 MGP_CBAJ_G0027712.1 mouse_genomes_project 4 3466957 3468263 - Tox protein_coding processed_transcript MGP_CBAJ_T0064223.1 MGP_CBAJ_G0027712.1 mouse_genomes_project 4 3520761 3785074 - Tox protein_coding retained_intron MGP_CBAJ_T0064224.1 MGP_CBAJ_G0027712.1 mouse_genomes_project 4 3608332 3784022 - Tox protein_coding retained_intron MGP_CBAJ_T0064740.1 MGP_CBAJ_G0027837.1 mouse_genomes_project 4 42476480 42519659 - MGP_CBAJ_P0064740 Cntfr protein_coding protein_coding MGP_CBAJ_T0064741.1 MGP_CBAJ_G0027837.1 mouse_genomes_project 4 42476480 42521259 - MGP_CBAJ_P0064741 Cntfr protein_coding protein_coding MGP_CBAJ_T0064742.1 MGP_CBAJ_G0027837.1 mouse_genomes_project 4 42484988 42485756 - Cntfr protein_coding processed_transcript MGP_CBAJ_T0064743.1 MGP_CBAJ_G0027837.1 mouse_genomes_project 4 42491183 42519662 - MGP_CBAJ_P0064743 Cntfr protein_coding protein_coding MGP_CBAJ_T0064744.1 MGP_CBAJ_G0027837.1 mouse_genomes_project 4 42491183 42521259 - MGP_CBAJ_P0064744 Cntfr protein_coding protein_coding MGP_CBAJ_T0064745.1 MGP_CBAJ_G0027837.1 mouse_genomes_project 4 42492491 42520152 - MGP_CBAJ_P0064745 Cntfr protein_coding protein_coding MGP_CBAJ_T0004444.1 MGP_CBAJ_G0003860.1 mouse_genomes_project 4 133435290 133472476 - 1700121C08Rik antisense antisense MGP_CBAJ_T0069114.1 MGP_CBAJ_G0028838.1 mouse_genomes_project 4 166669124 166672727 + MGP_CBAJ_P0069114 Hes2 protein_coding protein_coding MGP_CBAJ_T0069115.1 MGP_CBAJ_G0028838.1 mouse_genomes_project 4 166669806 166670858 + Hes2 protein_coding processed_transcript MGP_CBAJ_T0068735.1 MGP_CBAJ_G0028760.1 mouse_genomes_project 4 157739504 157749557 - MGP_CBAJ_P0068735 Gm13124 protein_coding protein_coding MGP_CBAJ_T0067305.1 MGP_CBAJ_G0028420.1 mouse_genomes_project 4 134574843 134584985 + MGP_CBAJ_P0067305 protein_coding protein_coding MGP_CBAJ_T0067306.1 MGP_CBAJ_G0028420.1 mouse_genomes_project 4 134583897 134620489 + MGP_CBAJ_P0067306 protein_coding protein_coding MGP_CBAJ_T0067307.1 MGP_CBAJ_G0028420.1 mouse_genomes_project 4 134602651 134606002 + protein_coding processed_transcript MGP_CBAJ_T0099245.1 MGP_CBAJ_G0037500.1 mouse_genomes_project 4 24723866 24723972 + Gm24965 snRNA snRNA MGP_CBAJ_T0069382.1 MGP_CBAJ_G0028884.1 mouse_genomes_project 4 170687303 170690033 - MGP_CBAJ_P0069382 Mmp23 protein_coding protein_coding MGP_CBAJ_T0069383.1 MGP_CBAJ_G0028884.1 mouse_genomes_project 4 170687305 170688674 - Mmp23 protein_coding retained_intron MGP_CBAJ_T0069384.1 MGP_CBAJ_G0028884.1 mouse_genomes_project 4 170688901 170689856 - Mmp23 protein_coding retained_intron MGP_CBAJ_T0069385.1 MGP_CBAJ_G0028884.1 mouse_genomes_project 4 170688918 170689541 - Mmp23 protein_coding retained_intron MGP_CBAJ_T0007926.1 MGP_CBAJ_G0006463.1 mouse_genomes_project 4 165159147 165172973 + Gm13049 lincRNA lincRNA MGP_CBAJ_T0065695.1 MGP_CBAJ_G0028059.1 mouse_genomes_project 4 85222782 85223926 + MGP_CBAJ_P0065695 protein_coding protein_coding MGP_CBAJ_T0100548.1 MGP_CBAJ_G0038803.1 mouse_genomes_project 4 70227806 70227939 + Gm25480 snoRNA snoRNA MGP_CBAJ_T0068073.1 MGP_CBAJ_G0028579.1 mouse_genomes_project 4 145224974 145227282 - MGP_CBAJ_P0068073 Zfp593 protein_coding protein_coding MGP_CBAJ_T0068074.1 MGP_CBAJ_G0028579.1 mouse_genomes_project 4 145224992 145227232 - Zfp593 protein_coding processed_transcript MGP_CBAJ_T0068759.1 MGP_CBAJ_G0028769.1 mouse_genomes_project 4 161267182 161271357 - MGP_CBAJ_P0068759 protein_coding protein_coding MGP_CBAJ_T0067251.1 MGP_CBAJ_G0028404.1 mouse_genomes_project 4 133298749 133302328 - MGP_CBAJ_P0067251 Ndufs5 protein_coding protein_coding MGP_CBAJ_T0067252.1 MGP_CBAJ_G0028404.1 mouse_genomes_project 4 133298749 133304911 - MGP_CBAJ_P0067252 Ndufs5 protein_coding protein_coding MGP_CBAJ_T0067253.1 MGP_CBAJ_G0028404.1 mouse_genomes_project 4 133298749 133304895 - MGP_CBAJ_P0067253 Ndufs5 protein_coding protein_coding MGP_CBAJ_T0067254.1 MGP_CBAJ_G0028404.1 mouse_genomes_project 4 133298908 133304890 - MGP_CBAJ_P0067254 Ndufs5 protein_coding protein_coding MGP_CBAJ_T0004480.1 MGP_CBAJ_G0003889.1 mouse_genomes_project 4 152285937 152287416 + Gm13027 antisense antisense MGP_CBAJ_T0066221.1 MGP_CBAJ_G0028183.1 mouse_genomes_project 4 114507249 114535105 - MGP_CBAJ_P0066221 Pcsk9 protein_coding protein_coding MGP_CBAJ_T0100568.1 MGP_CBAJ_G0038823.1 mouse_genomes_project 4 126026313 126026383 - Gm22980 snoRNA snoRNA MGP_CBAJ_T0067073.1 MGP_CBAJ_G0028360.1 mouse_genomes_project 4 128419622 128436478 - MGP_CBAJ_P0067073 Ybx1 protein_coding protein_coding MGP_CBAJ_T0067074.1 MGP_CBAJ_G0028360.1 mouse_genomes_project 4 128419631 128425224 - MGP_CBAJ_P0067074 Ybx1 protein_coding protein_coding MGP_CBAJ_T0067075.1 MGP_CBAJ_G0028360.1 mouse_genomes_project 4 128420558 128421842 - Ybx1 protein_coding processed_transcript MGP_CBAJ_T0067076.1 MGP_CBAJ_G0028360.1 mouse_genomes_project 4 128423574 128424618 - Ybx1 protein_coding processed_transcript MGP_CBAJ_T0064163.1 MGP_CBAJ_G0027700.1 mouse_genomes_project 4 376915 378364 - MGP_CBAJ_P0064163 Mos protein_coding protein_coding MGP_CBAJ_T0064278.1 MGP_CBAJ_G0027722.1 mouse_genomes_project 4 8409321 8427242 + MGP_CBAJ_P0064278 Trp53inp1 protein_coding protein_coding MGP_CBAJ_T0064279.1 MGP_CBAJ_G0027722.1 mouse_genomes_project 4 8409331 8427242 + Trp53inp1 protein_coding processed_transcript MGP_CBAJ_T0064280.1 MGP_CBAJ_G0027722.1 mouse_genomes_project 4 8409334 8419293 + Trp53inp1 protein_coding processed_transcript MGP_CBAJ_T0064281.1 MGP_CBAJ_G0027722.1 mouse_genomes_project 4 8417342 8420907 + Trp53inp1 protein_coding processed_transcript MGP_CBAJ_T0014304.1 MGP_CBAJ_G0012416.1 mouse_genomes_project 4 34268753 34269645 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067915.1 MGP_CBAJ_G0028547.1 mouse_genomes_project 4 143703493 143766737 + Ahdc1 protein_coding processed_transcript MGP_CBAJ_T0067916.1 MGP_CBAJ_G0028547.1 mouse_genomes_project 4 143703739 143785506 + MGP_CBAJ_P0067916 Ahdc1 protein_coding protein_coding MGP_CBAJ_T0067917.1 MGP_CBAJ_G0028547.1 mouse_genomes_project 4 143703739 143785753 + MGP_CBAJ_P0067917 Ahdc1 protein_coding protein_coding MGP_CBAJ_T0067918.1 MGP_CBAJ_G0028547.1 mouse_genomes_project 4 143703776 143767028 + Ahdc1 protein_coding processed_transcript MGP_CBAJ_T0067919.1 MGP_CBAJ_G0028547.1 mouse_genomes_project 4 143703798 143761208 + Ahdc1 protein_coding processed_transcript MGP_CBAJ_T0067920.1 MGP_CBAJ_G0028547.1 mouse_genomes_project 4 143706463 143785295 + Ahdc1 protein_coding processed_transcript MGP_CBAJ_T0067921.1 MGP_CBAJ_G0028547.1 mouse_genomes_project 4 143706675 143766739 + Ahdc1 protein_coding processed_transcript MGP_CBAJ_T0067922.1 MGP_CBAJ_G0028547.1 mouse_genomes_project 4 143706717 143767693 + Ahdc1 protein_coding processed_transcript MGP_CBAJ_T0067923.1 MGP_CBAJ_G0028547.1 mouse_genomes_project 4 143706829 143785296 + MGP_CBAJ_P0067923 Ahdc1 protein_coding protein_coding MGP_CBAJ_T0067924.1 MGP_CBAJ_G0028547.1 mouse_genomes_project 4 143745645 143784907 + MGP_CBAJ_P0067924 Ahdc1 protein_coding protein_coding MGP_CBAJ_T0067925.1 MGP_CBAJ_G0028547.1 mouse_genomes_project 4 143772168 143779723 + Ahdc1 protein_coding processed_transcript MGP_CBAJ_T0065033.1 MGP_CBAJ_G0027887.1 mouse_genomes_project 4 44730499 44735113 - MGP_CBAJ_P0065033 Olfr71 protein_coding protein_coding MGP_CBAJ_T0065034.1 MGP_CBAJ_G0027887.1 mouse_genomes_project 4 44730499 44731438 - MGP_CBAJ_P0065034 Olfr71 protein_coding protein_coding MGP_CBAJ_T0004436.1 MGP_CBAJ_G0003854.1 mouse_genomes_project 4 128244801 128245511 - Gm12867 antisense antisense MGP_CBAJ_T0010531.1 MGP_CBAJ_G0008669.1 mouse_genomes_project 4 170847440 170847566 + Gm27743 miRNA miRNA MGP_CBAJ_T0064613.1 MGP_CBAJ_G0027806.1 mouse_genomes_project 4 35139961 35141833 + MGP_CBAJ_P0064613 Ifnk protein_coding protein_coding MGP_CBAJ_T0065924.1 MGP_CBAJ_G0028115.1 mouse_genomes_project 4 101308376 101330741 - MGP_CBAJ_P0065924 Lrrc19 protein_coding protein_coding MGP_CBAJ_T0065925.1 MGP_CBAJ_G0028115.1 mouse_genomes_project 4 101308376 101330769 - MGP_CBAJ_P0065925 Lrrc19 protein_coding protein_coding MGP_CBAJ_T0004462.1 MGP_CBAJ_G0003874.1 mouse_genomes_project 4 143100627 143109702 - Gm12981 antisense antisense MGP_CBAJ_T0004473.1 MGP_CBAJ_G0003884.1 mouse_genomes_project 4 149474446 149491505 - antisense antisense MGP_CBAJ_T0067963.1 MGP_CBAJ_G0028556.1 mouse_genomes_project 4 144299783 144307663 + MGP_CBAJ_P0067963 Fam46b protein_coding protein_coding MGP_CBAJ_T0004503.1 MGP_CBAJ_G0003906.1 mouse_genomes_project 4 162855353 162856168 - Gm15969 antisense antisense MGP_CBAJ_T0099239.1 MGP_CBAJ_G0037494.1 mouse_genomes_project 4 13010745 13010852 + Gm24317 snRNA snRNA MGP_CBAJ_T0067118.1 MGP_CBAJ_G0028368.1 mouse_genomes_project 4 128834418 128836807 + MGP_CBAJ_P0067118 Guca2a protein_coding protein_coding MGP_CBAJ_T0068413.1 MGP_CBAJ_G0028658.1 mouse_genomes_project 4 150306889 150309327 - MGP_CBAJ_P0068413 Fam43b protein_coding protein_coding MGP_CBAJ_T0014345.1 MGP_CBAJ_G0012457.1 mouse_genomes_project 4 50476499 50476835 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099257.1 MGP_CBAJ_G0037512.1 mouse_genomes_project 4 44158913 44158978 - Gm25010 snRNA snRNA MGP_CBAJ_T0010523.1 MGP_CBAJ_G0008661.1 mouse_genomes_project 4 152979224 152979288 + Gm25951 miRNA miRNA MGP_CBAJ_T0065421.1 MGP_CBAJ_G0027983.1 mouse_genomes_project 4 60244254 60544591 + MGP_CBAJ_P0065421 Palm2 protein_coding protein_coding MGP_CBAJ_T0065422.1 MGP_CBAJ_G0027983.1 mouse_genomes_project 4 60395659 60544377 + MGP_CBAJ_P0065422 Palm2 protein_coding protein_coding MGP_CBAJ_T0065424.1 MGP_CBAJ_G0027983.1 mouse_genomes_project 4 60395820 60542838 + MGP_CBAJ_P0065424 Palm2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065426.1 MGP_CBAJ_G0027983.1 mouse_genomes_project 4 60465651 60542098 + Palm2 protein_coding retained_intron MGP_CBAJ_T0064185.1 MGP_CBAJ_G0027704.1 mouse_genomes_project 4 595392 618136 - MGP_CBAJ_P0064185 Sdr16c6 protein_coding protein_coding MGP_CBAJ_T0064186.1 MGP_CBAJ_G0027704.1 mouse_genomes_project 4 595394 618727 - MGP_CBAJ_P0064186 Sdr16c6 protein_coding protein_coding MGP_CBAJ_T0010444.1 MGP_CBAJ_G0008582.1 mouse_genomes_project 4 8045546 8045677 - Mir3471-1 miRNA miRNA MGP_CBAJ_T0014222.1 MGP_CBAJ_G0012334.1 mouse_genomes_project 4 11065707 11066443 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007811.1 MGP_CBAJ_G0006380.1 mouse_genomes_project 4 111133628 111257353 + Gm12718 lincRNA lincRNA MGP_CBAJ_T0007812.1 MGP_CBAJ_G0006380.1 mouse_genomes_project 4 111133649 111257335 + Gm12718 lincRNA lincRNA MGP_CBAJ_T0064611.1 MGP_CBAJ_G0027805.1 mouse_genomes_project 4 34921575 35145321 - MGP_CBAJ_P0064611 Mob3b protein_coding protein_coding MGP_CBAJ_T0064612.1 MGP_CBAJ_G0027805.1 mouse_genomes_project 4 35061755 35145321 - Mob3b protein_coding processed_transcript MGP_CBAJ_T0067548.1 MGP_CBAJ_G0028477.1 mouse_genomes_project 4 139290554 139336233 - MGP_CBAJ_P0067548 S100pbp protein_coding protein_coding MGP_CBAJ_T0067549.1 MGP_CBAJ_G0028477.1 mouse_genomes_project 4 139290554 139336196 - MGP_CBAJ_P0067549 S100pbp protein_coding protein_coding MGP_CBAJ_T0067550.1 MGP_CBAJ_G0028477.1 mouse_genomes_project 4 139290554 139336381 - MGP_CBAJ_P0067550 S100pbp protein_coding protein_coding MGP_CBAJ_T0067551.1 MGP_CBAJ_G0028477.1 mouse_genomes_project 4 139291921 139329183 - MGP_CBAJ_P0067551 S100pbp protein_coding protein_coding MGP_CBAJ_T0067552.1 MGP_CBAJ_G0028477.1 mouse_genomes_project 4 139293096 139336231 - S100pbp protein_coding processed_transcript MGP_CBAJ_T0067553.1 MGP_CBAJ_G0028477.1 mouse_genomes_project 4 139293375 139336231 - S100pbp protein_coding retained_intron MGP_CBAJ_T0067554.1 MGP_CBAJ_G0028477.1 mouse_genomes_project 4 139293375 139327075 - S100pbp protein_coding retained_intron MGP_CBAJ_T0067555.1 MGP_CBAJ_G0028477.1 mouse_genomes_project 4 139293581 139336166 - MGP_CBAJ_P0067555 S100pbp protein_coding protein_coding MGP_CBAJ_T0067556.1 MGP_CBAJ_G0028477.1 mouse_genomes_project 4 139293581 139336263 - MGP_CBAJ_P0067556 S100pbp protein_coding protein_coding MGP_CBAJ_T0067557.1 MGP_CBAJ_G0028477.1 mouse_genomes_project 4 139307570 139336271 - S100pbp protein_coding processed_transcript MGP_CBAJ_T0067558.1 MGP_CBAJ_G0028477.1 mouse_genomes_project 4 139312794 139322780 - S100pbp protein_coding processed_transcript MGP_CBAJ_T0067559.1 MGP_CBAJ_G0028477.1 mouse_genomes_project 4 139321639 139336280 - MGP_CBAJ_P0067559 S100pbp protein_coding protein_coding MGP_CBAJ_T0067560.1 MGP_CBAJ_G0028477.1 mouse_genomes_project 4 139328394 139336324 - S100pbp protein_coding processed_transcript MGP_CBAJ_T0067561.1 MGP_CBAJ_G0028477.1 mouse_genomes_project 4 139328452 139336152 - S100pbp protein_coding processed_transcript MGP_CBAJ_T0069415.1 MGP_CBAJ_G0028893.1 mouse_genomes_project 4 170860346 170861117 + Mrpl20 protein_coding processed_transcript MGP_CBAJ_T0069416.1 MGP_CBAJ_G0028893.1 mouse_genomes_project 4 170860995 170866541 + MGP_CBAJ_P0069416 Mrpl20 protein_coding protein_coding MGP_CBAJ_T0069417.1 MGP_CBAJ_G0028893.1 mouse_genomes_project 4 170861121 170866508 + MGP_CBAJ_P0069417 Mrpl20 protein_coding protein_coding MGP_CBAJ_T0069418.1 MGP_CBAJ_G0028893.1 mouse_genomes_project 4 170861124 170867685 + MGP_CBAJ_P0069418 Mrpl20 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069419.1 MGP_CBAJ_G0028893.1 mouse_genomes_project 4 170861126 170864868 + MGP_CBAJ_P0069419 Mrpl20 protein_coding protein_coding MGP_CBAJ_T0069420.1 MGP_CBAJ_G0028893.1 mouse_genomes_project 4 170861233 170866504 + Mrpl20 protein_coding processed_transcript MGP_CBAJ_T0014281.1 MGP_CBAJ_G0012393.1 mouse_genomes_project 4 27483269 27484276 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0067825.1 MGP_CBAJ_G0028527.1 mouse_genomes_project 4 142764754 142800252 - MGP_CBAJ_P0067825 Gmeb1 protein_coding protein_coding MGP_CBAJ_T0067826.1 MGP_CBAJ_G0028527.1 mouse_genomes_project 4 142768238 142811283 - MGP_CBAJ_P0067826 Gmeb1 protein_coding protein_coding MGP_CBAJ_T0067827.1 MGP_CBAJ_G0028527.1 mouse_genomes_project 4 142770311 142799610 - MGP_CBAJ_P0067827 Gmeb1 protein_coding protein_coding MGP_CBAJ_T0067828.1 MGP_CBAJ_G0028527.1 mouse_genomes_project 4 142770963 142811364 - MGP_CBAJ_P0067828 Gmeb1 protein_coding protein_coding MGP_CBAJ_T0067829.1 MGP_CBAJ_G0028527.1 mouse_genomes_project 4 142776773 142782665 - Gmeb1 protein_coding retained_intron MGP_CBAJ_T0067830.1 MGP_CBAJ_G0028527.1 mouse_genomes_project 4 142784451 142793826 - Gmeb1 protein_coding retained_intron MGP_CBAJ_T0067831.1 MGP_CBAJ_G0028527.1 mouse_genomes_project 4 142799521 142802010 - Gmeb1 protein_coding processed_transcript MGP_CBAJ_T0014259.1 MGP_CBAJ_G0012371.1 mouse_genomes_project 4 20975705 20976277 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007919.1 MGP_CBAJ_G0006456.1 mouse_genomes_project 4 162155801 162158896 - Gm13200 lincRNA lincRNA MGP_CBAJ_T0066845.1 MGP_CBAJ_G0028305.1 mouse_genomes_project 4 125953234 125974612 + MGP_CBAJ_P0066845 Ptch2 protein_coding protein_coding MGP_CBAJ_T0066846.1 MGP_CBAJ_G0028305.1 mouse_genomes_project 4 125953255 125974612 + MGP_CBAJ_P0066846 Ptch2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066847.1 MGP_CBAJ_G0028305.1 mouse_genomes_project 4 125964096 125965514 + Ptch2 protein_coding retained_intron MGP_CBAJ_T0066848.1 MGP_CBAJ_G0028305.1 mouse_genomes_project 4 125964423 125967729 + MGP_CBAJ_P0066848 Ptch2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066849.1 MGP_CBAJ_G0028305.1 mouse_genomes_project 4 125969448 125970302 + Ptch2 protein_coding retained_intron MGP_CBAJ_T0066850.1 MGP_CBAJ_G0028305.1 mouse_genomes_project 4 125972652 125975330 + Ptch2 protein_coding retained_intron MGP_CBAJ_T0067940.1 MGP_CBAJ_G0028551.1 mouse_genomes_project 4 144001081 144013134 + MGP_CBAJ_P0067940 Map3k6 protein_coding protein_coding MGP_CBAJ_T0067941.1 MGP_CBAJ_G0028551.1 mouse_genomes_project 4 144007441 144008290 + Map3k6 protein_coding processed_transcript MGP_CBAJ_T0067942.1 MGP_CBAJ_G0028551.1 mouse_genomes_project 4 144007517 144008318 + Map3k6 protein_coding processed_transcript MGP_CBAJ_T0067943.1 MGP_CBAJ_G0028551.1 mouse_genomes_project 4 144011052 144013133 + Map3k6 protein_coding processed_transcript MGP_CBAJ_T0001395.1 MGP_CBAJ_G0001319.1 mouse_genomes_project 4 166504192 166507053 - TEC TEC MGP_CBAJ_T0097813.1 MGP_CBAJ_G0036086.1 mouse_genomes_project 4 37165616 37165954 - pseudogene pseudogene MGP_CBAJ_T0099282.1 MGP_CBAJ_G0037537.1 mouse_genomes_project 4 108723422 108723586 + Gm25124 snRNA snRNA MGP_CBAJ_T0100531.1 MGP_CBAJ_G0038786.1 mouse_genomes_project 4 47951276 47951407 + Gm22247 snoRNA snoRNA MGP_CBAJ_T0014364.1 MGP_CBAJ_G0012476.1 mouse_genomes_project 4 57362016 57363598 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007691.1 MGP_CBAJ_G0006280.1 mouse_genomes_project 4 2272585 2283654 + 4930423M02Rik lincRNA lincRNA MGP_CBAJ_T0007692.1 MGP_CBAJ_G0006280.1 mouse_genomes_project 4 2272593 2283127 + 4930423M02Rik lincRNA lincRNA MGP_CBAJ_T0017766.1 MGP_CBAJ_G0015274.1 mouse_genomes_project 4 683942 732032 + A830012C17Rik processed_transcript processed_transcript MGP_CBAJ_T0069352.1 MGP_CBAJ_G0028879.1 mouse_genomes_project 4 170507441 170584306 + MGP_CBAJ_P0069352 Gnb1 protein_coding protein_coding MGP_CBAJ_T0069353.1 MGP_CBAJ_G0028879.1 mouse_genomes_project 4 170507444 170584306 + MGP_CBAJ_P0069353 Gnb1 protein_coding protein_coding MGP_CBAJ_T0069354.1 MGP_CBAJ_G0028879.1 mouse_genomes_project 4 170507450 170584306 + MGP_CBAJ_P0069354 Gnb1 protein_coding protein_coding MGP_CBAJ_T0069355.1 MGP_CBAJ_G0028879.1 mouse_genomes_project 4 170508991 170567715 + MGP_CBAJ_P0069355 Gnb1 protein_coding protein_coding MGP_CBAJ_T0069356.1 MGP_CBAJ_G0028879.1 mouse_genomes_project 4 170544118 170580182 + MGP_CBAJ_P0069356 Gnb1 protein_coding protein_coding MGP_CBAJ_T0069357.1 MGP_CBAJ_G0028879.1 mouse_genomes_project 4 170544292 170565874 + Gnb1 protein_coding retained_intron MGP_CBAJ_T0069358.1 MGP_CBAJ_G0028879.1 mouse_genomes_project 4 170549266 170584304 + MGP_CBAJ_P0069358 Gnb1 protein_coding protein_coding MGP_CBAJ_T0069359.1 MGP_CBAJ_G0028879.1 mouse_genomes_project 4 170567555 170580251 + Gnb1 protein_coding retained_intron MGP_CBAJ_T0069360.1 MGP_CBAJ_G0028879.1 mouse_genomes_project 4 170578269 170582699 + Gnb1 protein_coding retained_intron MGP_CBAJ_T0014501.1 MGP_CBAJ_G0012613.1 mouse_genomes_project 4 116871568 116871950 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100556.1 MGP_CBAJ_G0038811.1 mouse_genomes_project 4 86689927 86690058 - Gm25803 snoRNA snoRNA MGP_CBAJ_T0066791.1 MGP_CBAJ_G0028296.1 mouse_genomes_project 4 125488343 125497927 + MGP_CBAJ_P0066791 Ccdc163 protein_coding protein_coding MGP_CBAJ_T0066792.1 MGP_CBAJ_G0028296.1 mouse_genomes_project 4 125488405 125497931 + MGP_CBAJ_P0066792 Ccdc163 protein_coding protein_coding MGP_CBAJ_T0066793.1 MGP_CBAJ_G0028296.1 mouse_genomes_project 4 125488430 125490291 + MGP_CBAJ_P0066793 Ccdc163 protein_coding protein_coding MGP_CBAJ_T0066794.1 MGP_CBAJ_G0028296.1 mouse_genomes_project 4 125488432 125489952 + MGP_CBAJ_P0066794 Ccdc163 protein_coding protein_coding MGP_CBAJ_T0066795.1 MGP_CBAJ_G0028296.1 mouse_genomes_project 4 125488443 125490429 + MGP_CBAJ_P0066795 Ccdc163 protein_coding protein_coding MGP_CBAJ_T0066796.1 MGP_CBAJ_G0028296.1 mouse_genomes_project 4 125488449 125489907 + Ccdc163 protein_coding processed_transcript MGP_CBAJ_T0066797.1 MGP_CBAJ_G0028296.1 mouse_genomes_project 4 125488458 125490651 + Ccdc163 protein_coding retained_intron MGP_CBAJ_T0066798.1 MGP_CBAJ_G0028296.1 mouse_genomes_project 4 125488468 125497932 + MGP_CBAJ_P0066798 Ccdc163 protein_coding protein_coding MGP_CBAJ_T0066799.1 MGP_CBAJ_G0028296.1 mouse_genomes_project 4 125488538 125489655 + MGP_CBAJ_P0066799 Ccdc163 protein_coding protein_coding MGP_CBAJ_T0066800.1 MGP_CBAJ_G0028296.1 mouse_genomes_project 4 125488763 125497932 + MGP_CBAJ_P0066800 Ccdc163 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066801.1 MGP_CBAJ_G0028296.1 mouse_genomes_project 4 125488764 125497931 + MGP_CBAJ_P0066801 Ccdc163 protein_coding protein_coding MGP_CBAJ_T0066803.1 MGP_CBAJ_G0028296.1 mouse_genomes_project 4 125495213 125524842 + Ccdc163 protein_coding processed_transcript MGP_CBAJ_T0066804.1 MGP_CBAJ_G0028296.1 mouse_genomes_project 4 125495511 125534111 + Ccdc163 protein_coding processed_transcript MGP_CBAJ_T0066805.1 MGP_CBAJ_G0028296.1 mouse_genomes_project 4 125495578 125497927 + MGP_CBAJ_P0066805 Ccdc163 protein_coding protein_coding MGP_CBAJ_T0068708.1 MGP_CBAJ_G0028739.1 mouse_genomes_project 4 157079860 157084493 + MGP_CBAJ_P0068708 protein_coding protein_coding MGP_CBAJ_T0101903.1 MGP_CBAJ_G0039934.1 mouse_genomes_project 4 120961657 120962704 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0007763.1 MGP_CBAJ_G0006339.1 mouse_genomes_project 4 66059414 66063434 - Gm11211 lincRNA lincRNA MGP_CBAJ_T0014241.1 MGP_CBAJ_G0012353.1 mouse_genomes_project 4 14910862 14911341 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067258.1 MGP_CBAJ_G0028406.1 mouse_genomes_project 4 133374063 133402321 + Rhbdl2 protein_coding processed_transcript MGP_CBAJ_T0067259.1 MGP_CBAJ_G0028406.1 mouse_genomes_project 4 133374064 133431561 + MGP_CBAJ_P0067259 Rhbdl2 protein_coding protein_coding MGP_CBAJ_T0067260.1 MGP_CBAJ_G0028406.1 mouse_genomes_project 4 133387225 133400964 + Rhbdl2 protein_coding processed_transcript MGP_CBAJ_T0067261.1 MGP_CBAJ_G0028406.1 mouse_genomes_project 4 133400736 133431561 + MGP_CBAJ_P0067261 Rhbdl2 protein_coding protein_coding MGP_CBAJ_T0067262.1 MGP_CBAJ_G0028406.1 mouse_genomes_project 4 133404239 133407208 + Rhbdl2 protein_coding processed_transcript MGP_CBAJ_T0010443.1 MGP_CBAJ_G0008581.1 mouse_genomes_project 4 6738933 6739005 + Gm25677 miRNA miRNA MGP_CBAJ_T0098383.1 MGP_CBAJ_G0036649.1 mouse_genomes_project 4 31848318 31862379 + Bach2it1 sense_intronic sense_intronic MGP_CBAJ_T0010442.1 MGP_CBAJ_G0008580.1 mouse_genomes_project 4 9514 9616 + Mir3471-2 miRNA miRNA MGP_CBAJ_T0064483.1 MGP_CBAJ_G0027776.1 mouse_genomes_project 4 24345842 24561431 - MGP_CBAJ_P0064483 Fut9 protein_coding protein_coding MGP_CBAJ_T0064484.1 MGP_CBAJ_G0027776.1 mouse_genomes_project 4 24356195 24561529 - MGP_CBAJ_P0064484 Fut9 protein_coding protein_coding MGP_CBAJ_T0064485.1 MGP_CBAJ_G0027776.1 mouse_genomes_project 4 24558987 24561140 - Fut9 protein_coding processed_transcript MGP_CBAJ_T0014589.1 MGP_CBAJ_G0012701.1 mouse_genomes_project 4 147445399 147445859 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065245.1 MGP_CBAJ_G0027933.1 mouse_genomes_project 4 48920684 48981708 + MGP_CBAJ_P0065245 Tgfbr1 protein_coding protein_coding MGP_CBAJ_T0065246.1 MGP_CBAJ_G0027933.1 mouse_genomes_project 4 48920689 48984505 + MGP_CBAJ_P0065246 Tgfbr1 protein_coding protein_coding MGP_CBAJ_T0065247.1 MGP_CBAJ_G0027933.1 mouse_genomes_project 4 48920975 48928691 + Tgfbr1 protein_coding processed_transcript MGP_CBAJ_T0065248.1 MGP_CBAJ_G0027933.1 mouse_genomes_project 4 48954631 48980610 + MGP_CBAJ_P0065248 Tgfbr1 protein_coding protein_coding MGP_CBAJ_T0101915.1 MGP_CBAJ_G0039946.1 mouse_genomes_project 4 132023219 132048715 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0014455.1 MGP_CBAJ_G0012567.1 mouse_genomes_project 4 99816285 99817161 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098164.1 MGP_CBAJ_G0036437.1 mouse_genomes_project 4 19609456 19609812 + Gm22817 ribozyme ribozyme MGP_CBAJ_T0067104.1 MGP_CBAJ_G0028366.1 mouse_genomes_project 4 128714441 128723001 - MGP_CBAJ_P0067104 AA415398 protein_coding protein_coding MGP_CBAJ_T0067105.1 MGP_CBAJ_G0028366.1 mouse_genomes_project 4 128715569 128719473 - AA415398 protein_coding processed_transcript MGP_CBAJ_T0067106.1 MGP_CBAJ_G0028366.1 mouse_genomes_project 4 128715796 128723362 - AA415398 protein_coding processed_transcript MGP_CBAJ_T0067107.1 MGP_CBAJ_G0028366.1 mouse_genomes_project 4 128717613 128723761 - AA415398 protein_coding processed_transcript MGP_CBAJ_T0069374.1 MGP_CBAJ_G0028883.1 mouse_genomes_project 4 170661885 170667217 + Cdk11b protein_coding processed_transcript MGP_CBAJ_T0069375.1 MGP_CBAJ_G0028883.1 mouse_genomes_project 4 170661900 170686587 + MGP_CBAJ_P0069375 Cdk11b protein_coding protein_coding MGP_CBAJ_T0069376.1 MGP_CBAJ_G0028883.1 mouse_genomes_project 4 170661911 170662728 + Cdk11b protein_coding processed_transcript MGP_CBAJ_T0069377.1 MGP_CBAJ_G0028883.1 mouse_genomes_project 4 170661914 170686587 + MGP_CBAJ_P0069377 Cdk11b protein_coding protein_coding MGP_CBAJ_T0069378.1 MGP_CBAJ_G0028883.1 mouse_genomes_project 4 170661941 170686587 + MGP_CBAJ_P0069378 Cdk11b protein_coding protein_coding MGP_CBAJ_T0069379.1 MGP_CBAJ_G0028883.1 mouse_genomes_project 4 170671046 170676702 + Cdk11b protein_coding processed_transcript MGP_CBAJ_T0069380.1 MGP_CBAJ_G0028883.1 mouse_genomes_project 4 170683851 170685054 + Cdk11b protein_coding processed_transcript MGP_CBAJ_T0069381.1 MGP_CBAJ_G0028883.1 mouse_genomes_project 4 170684016 170684941 + Cdk11b protein_coding processed_transcript MGP_CBAJ_T0067680.1 MGP_CBAJ_G0028500.1 mouse_genomes_project 4 140021639 140063140 - MGP_CBAJ_P0067680 Khdrbs1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067681.1 MGP_CBAJ_G0028500.1 mouse_genomes_project 4 140022298 140032306 - Khdrbs1 protein_coding retained_intron MGP_CBAJ_T0067682.1 MGP_CBAJ_G0028500.1 mouse_genomes_project 4 140032304 140063139 - MGP_CBAJ_P0067682 Khdrbs1 protein_coding protein_coding MGP_CBAJ_T0067683.1 MGP_CBAJ_G0028500.1 mouse_genomes_project 4 140049303 140063146 - Khdrbs1 protein_coding retained_intron MGP_CBAJ_T0064346.1 MGP_CBAJ_G0027736.1 mouse_genomes_project 4 10329217 10400785 + MGP_CBAJ_P0064346 Triqk protein_coding protein_coding MGP_CBAJ_T0064347.1 MGP_CBAJ_G0027736.1 mouse_genomes_project 4 10329237 10404303 + MGP_CBAJ_P0064347 Triqk protein_coding protein_coding MGP_CBAJ_T0064348.1 MGP_CBAJ_G0027736.1 mouse_genomes_project 4 10340345 10400982 + Triqk protein_coding processed_transcript MGP_CBAJ_T0004428.1 MGP_CBAJ_G0003847.1 mouse_genomes_project 4 125844092 125844939 - 1700021J08Rik antisense antisense MGP_CBAJ_T0004362.1 MGP_CBAJ_G0003799.1 mouse_genomes_project 4 45846643 45867572 + Gm12462 antisense antisense MGP_CBAJ_T0064833.1 MGP_CBAJ_G0027858.1 mouse_genomes_project 4 43891029 43891860 + Dnajb5 protein_coding processed_transcript MGP_CBAJ_T0064834.1 MGP_CBAJ_G0027858.1 mouse_genomes_project 4 43891466 43899902 + Dnajb5 protein_coding retained_intron MGP_CBAJ_T0064835.1 MGP_CBAJ_G0027858.1 mouse_genomes_project 4 43891555 43894418 + Dnajb5 protein_coding processed_transcript MGP_CBAJ_T0064836.1 MGP_CBAJ_G0027858.1 mouse_genomes_project 4 43891877 43899908 + MGP_CBAJ_P0064836 Dnajb5 protein_coding protein_coding MGP_CBAJ_T0064837.1 MGP_CBAJ_G0027858.1 mouse_genomes_project 4 43894209 43899893 + MGP_CBAJ_P0064837 Dnajb5 protein_coding protein_coding MGP_CBAJ_T0066644.1 MGP_CBAJ_G0028265.1 mouse_genomes_project 4 124142318 124231441 + MGP_CBAJ_P0066644 protein_coding protein_coding MGP_CBAJ_T0066645.1 MGP_CBAJ_G0028265.1 mouse_genomes_project 4 124142318 124145128 + MGP_CBAJ_P0066645 protein_coding protein_coding MGP_CBAJ_T0066647.1 MGP_CBAJ_G0028265.1 mouse_genomes_project 4 124142353 124149648 + MGP_CBAJ_P0066647 protein_coding protein_coding MGP_CBAJ_T0066649.1 MGP_CBAJ_G0028265.1 mouse_genomes_project 4 124142367 124231439 + MGP_CBAJ_P0066649 protein_coding protein_coding MGP_CBAJ_T0068587.1 MGP_CBAJ_G0028703.1 mouse_genomes_project 4 153632781 153639748 + MGP_CBAJ_P0068587 Arhgef19 protein_coding protein_coding MGP_CBAJ_T0068588.1 MGP_CBAJ_G0028703.1 mouse_genomes_project 4 153632932 153640826 + Arhgef19 protein_coding retained_intron MGP_CBAJ_T0068589.1 MGP_CBAJ_G0028703.1 mouse_genomes_project 4 153636137 153639692 + MGP_CBAJ_P0068589 Arhgef19 protein_coding protein_coding MGP_CBAJ_T0068590.1 MGP_CBAJ_G0028703.1 mouse_genomes_project 4 153636151 153651003 + MGP_CBAJ_P0068590 Arhgef19 protein_coding protein_coding MGP_CBAJ_T0068591.1 MGP_CBAJ_G0028703.1 mouse_genomes_project 4 153636175 153640337 + MGP_CBAJ_P0068591 Arhgef19 protein_coding protein_coding MGP_CBAJ_T0068592.1 MGP_CBAJ_G0028703.1 mouse_genomes_project 4 153638707 153640780 + MGP_CBAJ_P0068592 Arhgef19 protein_coding protein_coding MGP_CBAJ_T0068593.1 MGP_CBAJ_G0028703.1 mouse_genomes_project 4 153639731 153641445 + MGP_CBAJ_P0068593 Arhgef19 protein_coding protein_coding MGP_CBAJ_T0068594.1 MGP_CBAJ_G0028703.1 mouse_genomes_project 4 153640261 153641312 + Arhgef19 protein_coding retained_intron MGP_CBAJ_T0010492.1 MGP_CBAJ_G0008630.1 mouse_genomes_project 4 130099514 130099606 - Mir30e miRNA miRNA MGP_CBAJ_T0066195.1 MGP_CBAJ_G0028174.1 mouse_genomes_project 4 111411671 112026369 + Dab1 protein_coding processed_transcript MGP_CBAJ_T0066196.1 MGP_CBAJ_G0028174.1 mouse_genomes_project 4 111411977 112565610 + MGP_CBAJ_P0066196 Dab1 protein_coding protein_coding MGP_CBAJ_T0066197.1 MGP_CBAJ_G0028174.1 mouse_genomes_project 4 112235765 112564724 + MGP_CBAJ_P0066197 Dab1 protein_coding protein_coding MGP_CBAJ_T0066198.1 MGP_CBAJ_G0028174.1 mouse_genomes_project 4 112236241 112634767 + MGP_CBAJ_P0066198 Dab1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066199.1 MGP_CBAJ_G0028174.1 mouse_genomes_project 4 112236241 112637814 + MGP_CBAJ_P0066199 Dab1 protein_coding protein_coding MGP_CBAJ_T0066200.1 MGP_CBAJ_G0028174.1 mouse_genomes_project 4 112389625 112565610 + MGP_CBAJ_P0066200 Dab1 protein_coding protein_coding MGP_CBAJ_T0066201.1 MGP_CBAJ_G0028174.1 mouse_genomes_project 4 112476262 112564020 + Dab1 protein_coding processed_transcript MGP_CBAJ_T0066202.1 MGP_CBAJ_G0028174.1 mouse_genomes_project 4 112490374 112603869 + MGP_CBAJ_P0066202 Dab1 protein_coding protein_coding MGP_CBAJ_T0065612.1 MGP_CBAJ_G0028036.1 mouse_genomes_project 4 67044516 67064360 - MGP_CBAJ_P0065612 1700018C11Rik protein_coding protein_coding MGP_CBAJ_T0065613.1 MGP_CBAJ_G0028036.1 mouse_genomes_project 4 67044516 67064372 - MGP_CBAJ_P0065613 1700018C11Rik protein_coding protein_coding MGP_CBAJ_T0098045.1 MGP_CBAJ_G0036318.1 mouse_genomes_project 4 87331516 87331627 + n-R5s187 rRNA rRNA MGP_CBAJ_T0014468.1 MGP_CBAJ_G0012580.1 mouse_genomes_project 4 106244310 106245029 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067102.1 MGP_CBAJ_G0028365.1 mouse_genomes_project 4 128637341 128668465 - MGP_CBAJ_P0067102 Rimkla protein_coding protein_coding MGP_CBAJ_T0067103.1 MGP_CBAJ_G0028365.1 mouse_genomes_project 4 128646552 128668346 - Rimkla protein_coding processed_transcript MGP_CBAJ_T0101882.1 MGP_CBAJ_G0039913.1 mouse_genomes_project 4 42627841 42628741 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0068510.1 MGP_CBAJ_G0028685.1 mouse_genomes_project 4 152104578 152112159 - MGP_CBAJ_P0068510 Klhdc7a protein_coding protein_coding MGP_CBAJ_T0014519.1 MGP_CBAJ_G0012631.1 mouse_genomes_project 4 124364188 124365261 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0064443.1 MGP_CBAJ_G0027766.1 mouse_genomes_project 4 20235007 20271682 + MGP_CBAJ_P0064443 Coq3 protein_coding protein_coding MGP_CBAJ_T0064444.1 MGP_CBAJ_G0027766.1 mouse_genomes_project 4 20255080 20256814 + Coq3 protein_coding processed_transcript MGP_CBAJ_T0014294.1 MGP_CBAJ_G0012406.1 mouse_genomes_project 4 31742669 31743106 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098044.1 MGP_CBAJ_G0036317.1 mouse_genomes_project 4 61876664 61876749 + Gm26400 rRNA rRNA MGP_CBAJ_T0064303.1 MGP_CBAJ_G0027726.1 mouse_genomes_project 4 8610715 8665197 - MGP_CBAJ_P0064303 Esrp1 protein_coding protein_coding MGP_CBAJ_T0064304.1 MGP_CBAJ_G0027726.1 mouse_genomes_project 4 8610715 8665093 - MGP_CBAJ_P0064304 Esrp1 protein_coding protein_coding MGP_CBAJ_T0064305.1 MGP_CBAJ_G0027726.1 mouse_genomes_project 4 8610820 8665197 - MGP_CBAJ_P0064305 Esrp1 protein_coding protein_coding MGP_CBAJ_T0064306.1 MGP_CBAJ_G0027726.1 mouse_genomes_project 4 8611787 8645820 - MGP_CBAJ_P0064306 Esrp1 protein_coding protein_coding MGP_CBAJ_T0064307.1 MGP_CBAJ_G0027726.1 mouse_genomes_project 4 8611787 8665093 - MGP_CBAJ_P0064307 Esrp1 protein_coding protein_coding MGP_CBAJ_T0064308.1 MGP_CBAJ_G0027726.1 mouse_genomes_project 4 8619391 8622903 - Esrp1 protein_coding processed_transcript MGP_CBAJ_T0064309.1 MGP_CBAJ_G0027726.1 mouse_genomes_project 4 8636237 8664808 - MGP_CBAJ_P0064309 Esrp1 protein_coding protein_coding MGP_CBAJ_T0064900.1 MGP_CBAJ_G0027866.1 mouse_genomes_project 4 44229067 44316456 + Atp8b5 protein_coding retained_intron MGP_CBAJ_T0064901.1 MGP_CBAJ_G0027866.1 mouse_genomes_project 4 44229078 44350676 + MGP_CBAJ_P0064901 Atp8b5 protein_coding protein_coding MGP_CBAJ_T0064902.1 MGP_CBAJ_G0027866.1 mouse_genomes_project 4 44229093 44350678 + MGP_CBAJ_P0064902 Atp8b5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064903.1 MGP_CBAJ_G0027866.1 mouse_genomes_project 4 44229093 44287473 + MGP_CBAJ_P0064903 Atp8b5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064904.1 MGP_CBAJ_G0027866.1 mouse_genomes_project 4 44229099 44289149 + MGP_CBAJ_P0064904 Atp8b5 protein_coding protein_coding MGP_CBAJ_T0097812.1 MGP_CBAJ_G0036085.1 mouse_genomes_project 4 3196830 3199705 - pseudogene pseudogene MGP_CBAJ_T0066741.1 MGP_CBAJ_G0028286.1 mouse_genomes_project 4 124937895 124991002 + MGP_CBAJ_P0066741 Pik3r3 protein_coding protein_coding MGP_CBAJ_T0066742.1 MGP_CBAJ_G0028286.1 mouse_genomes_project 4 124937938 125034203 + MGP_CBAJ_P0066742 Pik3r3 protein_coding protein_coding MGP_CBAJ_T0066743.1 MGP_CBAJ_G0028286.1 mouse_genomes_project 4 124937973 125030988 + MGP_CBAJ_P0066743 Pik3r3 protein_coding protein_coding MGP_CBAJ_T0014229.1 MGP_CBAJ_G0012341.1 mouse_genomes_project 4 13300026 13300350 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068967.1 MGP_CBAJ_G0028810.1 mouse_genomes_project 4 163833468 163874162 - MGP_CBAJ_P0068967 Slc25a33 protein_coding protein_coding MGP_CBAJ_T0065441.1 MGP_CBAJ_G0027990.1 mouse_genomes_project 4 61153748 61251148 + MGP_CBAJ_P0065441 Musk protein_coding protein_coding MGP_CBAJ_T0065442.1 MGP_CBAJ_G0027990.1 mouse_genomes_project 4 61153750 61251149 + MGP_CBAJ_P0065442 Musk protein_coding protein_coding MGP_CBAJ_T0065443.1 MGP_CBAJ_G0027990.1 mouse_genomes_project 4 61153750 61251148 + MGP_CBAJ_P0065443 Musk protein_coding protein_coding MGP_CBAJ_T0065444.1 MGP_CBAJ_G0027990.1 mouse_genomes_project 4 61153750 61251149 + MGP_CBAJ_P0065444 Musk protein_coding protein_coding MGP_CBAJ_T0065445.1 MGP_CBAJ_G0027990.1 mouse_genomes_project 4 61153750 61251148 + MGP_CBAJ_P0065445 Musk protein_coding protein_coding MGP_CBAJ_T0065446.1 MGP_CBAJ_G0027990.1 mouse_genomes_project 4 61153750 61251148 + MGP_CBAJ_P0065446 Musk protein_coding protein_coding MGP_CBAJ_T0065447.1 MGP_CBAJ_G0027990.1 mouse_genomes_project 4 61153750 61251149 + MGP_CBAJ_P0065447 Musk protein_coding protein_coding MGP_CBAJ_T0065448.1 MGP_CBAJ_G0027990.1 mouse_genomes_project 4 61153954 61176342 + Musk protein_coding processed_transcript MGP_CBAJ_T0069303.1 MGP_CBAJ_G0028872.1 mouse_genomes_project 4 170017271 170096636 + MGP_CBAJ_P0069303 Morn1 protein_coding protein_coding MGP_CBAJ_T0069304.1 MGP_CBAJ_G0028872.1 mouse_genomes_project 4 170017271 170050057 + MGP_CBAJ_P0069304 Morn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069305.1 MGP_CBAJ_G0028872.1 mouse_genomes_project 4 170017283 170023753 + MGP_CBAJ_P0069305 Morn1 protein_coding protein_coding MGP_CBAJ_T0069306.1 MGP_CBAJ_G0028872.1 mouse_genomes_project 4 170017297 170024034 + MGP_CBAJ_P0069306 Morn1 protein_coding protein_coding MGP_CBAJ_T0069307.1 MGP_CBAJ_G0028872.1 mouse_genomes_project 4 170017308 170087567 + Morn1 protein_coding processed_transcript MGP_CBAJ_T0069308.1 MGP_CBAJ_G0028872.1 mouse_genomes_project 4 170017322 170087545 + Morn1 protein_coding processed_transcript MGP_CBAJ_T0069309.1 MGP_CBAJ_G0028872.1 mouse_genomes_project 4 170032842 170072970 + Morn1 protein_coding retained_intron MGP_CBAJ_T0069310.1 MGP_CBAJ_G0028872.1 mouse_genomes_project 4 170048565 170072534 + Morn1 protein_coding retained_intron MGP_CBAJ_T0004346.1 MGP_CBAJ_G0003786.1 mouse_genomes_project 4 23491011 23498642 + Gm11899 antisense antisense MGP_CBAJ_T0099316.1 MGP_CBAJ_G0037571.1 mouse_genomes_project 4 150856158 150856259 - Gm25280 snRNA snRNA MGP_CBAJ_T0014594.1 MGP_CBAJ_G0012706.1 mouse_genomes_project 4 149035020 149035376 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014515.1 MGP_CBAJ_G0012627.1 mouse_genomes_project 4 123894308 123894681 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014279.1 MGP_CBAJ_G0012391.1 mouse_genomes_project 4 27077448 27077771 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014413.1 MGP_CBAJ_G0012525.1 mouse_genomes_project 4 81067092 81068031 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007690.1 MGP_CBAJ_G0006279.1 mouse_genomes_project 4 2179230 2185216 - Gm11782 lincRNA lincRNA MGP_CBAJ_T0014578.1 MGP_CBAJ_G0012690.1 mouse_genomes_project 4 145166056 145166377 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100588.1 MGP_CBAJ_G0038843.1 mouse_genomes_project 4 142877779 142877909 + Snora61 snoRNA snoRNA MGP_CBAJ_T0068694.1 MGP_CBAJ_G0028731.1 mouse_genomes_project 4 156230005 156238684 + MGP_CBAJ_P0068694 Pramef8 protein_coding protein_coding MGP_CBAJ_T0068695.1 MGP_CBAJ_G0028731.1 mouse_genomes_project 4 156230551 156234435 + MGP_CBAJ_P0068695 Pramef8 protein_coding protein_coding MGP_CBAJ_T0068696.1 MGP_CBAJ_G0028731.1 mouse_genomes_project 4 156230566 156238684 + MGP_CBAJ_P0068696 Pramef8 protein_coding protein_coding MGP_CBAJ_T0068697.1 MGP_CBAJ_G0028731.1 mouse_genomes_project 4 156230588 156235262 + MGP_CBAJ_P0068697 Pramef8 protein_coding protein_coding MGP_CBAJ_T0068698.1 MGP_CBAJ_G0028731.1 mouse_genomes_project 4 156230589 156231967 + Pramef8 protein_coding processed_transcript MGP_CBAJ_T0014344.1 MGP_CBAJ_G0012456.1 mouse_genomes_project 4 50389749 50390114 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0066210.1 MGP_CBAJ_G0028178.1 mouse_genomes_project 4 112816887 112924230 + MGP_CBAJ_P0066210 1700024P16Rik protein_coding protein_coding MGP_CBAJ_T0066211.1 MGP_CBAJ_G0028178.1 mouse_genomes_project 4 112816955 112924230 + MGP_CBAJ_P0066211 1700024P16Rik protein_coding protein_coding MGP_CBAJ_T0067489.1 MGP_CBAJ_G0028465.1 mouse_genomes_project 4 138631133 138637557 - Zscan20 protein_coding processed_transcript MGP_CBAJ_T0067490.1 MGP_CBAJ_G0028465.1 mouse_genomes_project 4 138631141 138658995 - MGP_CBAJ_P0067490 Zscan20 protein_coding protein_coding MGP_CBAJ_T0067491.1 MGP_CBAJ_G0028465.1 mouse_genomes_project 4 138632969 138658939 - MGP_CBAJ_P0067491 Zscan20 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067492.1 MGP_CBAJ_G0028465.1 mouse_genomes_project 4 138650355 138658931 - Zscan20 protein_coding retained_intron MGP_CBAJ_T0067493.1 MGP_CBAJ_G0028465.1 mouse_genomes_project 4 138653359 138658892 - MGP_CBAJ_P0067493 Zscan20 protein_coding protein_coding MGP_CBAJ_T0067494.1 MGP_CBAJ_G0028465.1 mouse_genomes_project 4 138653393 138658878 - MGP_CBAJ_P0067494 Zscan20 protein_coding protein_coding MGP_CBAJ_T0068484.1 MGP_CBAJ_G0028678.1 mouse_genomes_project 4 151470083 151499524 + MGP_CBAJ_P0068484 Emc1 protein_coding protein_coding MGP_CBAJ_T0068485.1 MGP_CBAJ_G0028678.1 mouse_genomes_project 4 151470089 151499524 + MGP_CBAJ_P0068485 Emc1 protein_coding protein_coding MGP_CBAJ_T0068486.1 MGP_CBAJ_G0028678.1 mouse_genomes_project 4 151470089 151499524 + MGP_CBAJ_P0068486 Emc1 protein_coding protein_coding MGP_CBAJ_T0068487.1 MGP_CBAJ_G0028678.1 mouse_genomes_project 4 151470105 151471994 + Emc1 protein_coding processed_transcript MGP_CBAJ_T0068489.1 MGP_CBAJ_G0028678.1 mouse_genomes_project 4 151476829 151493780 + Emc1 protein_coding processed_transcript MGP_CBAJ_T0014398.1 MGP_CBAJ_G0012510.1 mouse_genomes_project 4 76719994 76720327 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068722.1 MGP_CBAJ_G0028748.1 mouse_genomes_project 4 157450291 157470349 + MGP_CBAJ_P0068722 protein_coding protein_coding MGP_CBAJ_T0007738.1 MGP_CBAJ_G0006320.1 mouse_genomes_project 4 49633690 49635496 + Gm12434 lincRNA lincRNA MGP_CBAJ_T0004451.1 MGP_CBAJ_G0003866.1 mouse_genomes_project 4 135894560 135896331 + Gm12946 antisense antisense MGP_CBAJ_T0066978.1 MGP_CBAJ_G0028328.1 mouse_genomes_project 4 127379619 127434023 - MGP_CBAJ_P0066978 Szt2 protein_coding protein_coding MGP_CBAJ_T0066979.1 MGP_CBAJ_G0028328.1 mouse_genomes_project 4 127379623 127390983 - MGP_CBAJ_P0066979 Szt2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066980.1 MGP_CBAJ_G0028328.1 mouse_genomes_project 4 127380285 127381927 - Szt2 protein_coding processed_transcript MGP_CBAJ_T0066981.1 MGP_CBAJ_G0028328.1 mouse_genomes_project 4 127385684 127386564 - Szt2 protein_coding retained_intron MGP_CBAJ_T0066982.1 MGP_CBAJ_G0028328.1 mouse_genomes_project 4 127389381 127390534 - Szt2 protein_coding retained_intron MGP_CBAJ_T0066983.1 MGP_CBAJ_G0028328.1 mouse_genomes_project 4 127411486 127412290 - Szt2 protein_coding processed_transcript MGP_CBAJ_T0100523.1 MGP_CBAJ_G0038778.1 mouse_genomes_project 4 37554946 37555067 + Gm22732 snoRNA snoRNA MGP_CBAJ_T0099292.1 MGP_CBAJ_G0037547.1 mouse_genomes_project 4 125872673 125872772 + Gm22335 snRNA snRNA MGP_CBAJ_T0007769.1 MGP_CBAJ_G0006345.1 mouse_genomes_project 4 72161578 72170918 - Gm12911 lincRNA lincRNA MGP_CBAJ_T0065382.1 MGP_CBAJ_G0027976.1 mouse_genomes_project 4 59472646 59531471 - MGP_CBAJ_P0065382 Ikbkap protein_coding protein_coding MGP_CBAJ_T0065383.1 MGP_CBAJ_G0027976.1 mouse_genomes_project 4 59473978 59480271 - Ikbkap protein_coding retained_intron MGP_CBAJ_T0065384.1 MGP_CBAJ_G0027976.1 mouse_genomes_project 4 59473981 59486312 - Ikbkap protein_coding retained_intron MGP_CBAJ_T0065385.1 MGP_CBAJ_G0027976.1 mouse_genomes_project 4 59477840 59481377 - Ikbkap protein_coding retained_intron MGP_CBAJ_T0065386.1 MGP_CBAJ_G0027976.1 mouse_genomes_project 4 59490853 59495585 - Ikbkap protein_coding retained_intron MGP_CBAJ_T0065387.1 MGP_CBAJ_G0027976.1 mouse_genomes_project 4 59499433 59502707 - Ikbkap protein_coding retained_intron MGP_CBAJ_T0067301.1 MGP_CBAJ_G0028418.1 mouse_genomes_project 4 134528444 134533017 + MGP_CBAJ_P0067301 Yrdc protein_coding protein_coding MGP_CBAJ_T0067302.1 MGP_CBAJ_G0028418.1 mouse_genomes_project 4 134528591 134532850 + MGP_CBAJ_P0067302 Yrdc protein_coding protein_coding MGP_CBAJ_T0067303.1 MGP_CBAJ_G0028418.1 mouse_genomes_project 4 134529671 134532493 + Yrdc protein_coding retained_intron MGP_CBAJ_T0064364.1 MGP_CBAJ_G0027741.1 mouse_genomes_project 4 12445368 12499320 + MGP_CBAJ_P0064364 Tmem55a protein_coding protein_coding MGP_CBAJ_T0001394.1 MGP_CBAJ_G0001318.1 mouse_genomes_project 4 166392702 166393124 - TEC TEC MGP_CBAJ_T0067099.1 MGP_CBAJ_G0028364.1 mouse_genomes_project 4 128584753 128620398 + MGP_CBAJ_P0067099 Zmynd12 protein_coding protein_coding MGP_CBAJ_T0067100.1 MGP_CBAJ_G0028364.1 mouse_genomes_project 4 128584811 128616728 + Zmynd12 protein_coding processed_transcript MGP_CBAJ_T0067101.1 MGP_CBAJ_G0028364.1 mouse_genomes_project 4 128609322 128639503 + Zmynd12 protein_coding processed_transcript MGP_CBAJ_T0069300.1 MGP_CBAJ_G0028871.1 mouse_genomes_project 4 169998376 170017066 - Rer1 protein_coding processed_transcript MGP_CBAJ_T0069301.1 MGP_CBAJ_G0028871.1 mouse_genomes_project 4 169998376 170017068 - MGP_CBAJ_P0069301 Rer1 protein_coding protein_coding MGP_CBAJ_T0069302.1 MGP_CBAJ_G0028871.1 mouse_genomes_project 4 170013379 170017077 - Rer1 protein_coding processed_transcript MGP_CBAJ_T0014213.1 MGP_CBAJ_G0012325.1 mouse_genomes_project 4 7756285 7756576 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0066890.1 MGP_CBAJ_G0028313.1 mouse_genomes_project 4 126166748 126184556 - MGP_CBAJ_P0066890 Rnf220 protein_coding protein_coding MGP_CBAJ_T0066891.1 MGP_CBAJ_G0028313.1 mouse_genomes_project 4 126166756 126417478 - MGP_CBAJ_P0066891 Rnf220 protein_coding protein_coding MGP_CBAJ_T0066892.1 MGP_CBAJ_G0028313.1 mouse_genomes_project 4 126167220 126281704 - MGP_CBAJ_P0066892 Rnf220 protein_coding protein_coding MGP_CBAJ_T0066893.1 MGP_CBAJ_G0028313.1 mouse_genomes_project 4 126171816 126180770 - Rnf220 protein_coding processed_transcript MGP_CBAJ_T0066894.1 MGP_CBAJ_G0028313.1 mouse_genomes_project 4 126172724 126185130 - MGP_CBAJ_P0066894 Rnf220 protein_coding protein_coding MGP_CBAJ_T0066895.1 MGP_CBAJ_G0028313.1 mouse_genomes_project 4 126180387 126184742 - Rnf220 protein_coding processed_transcript MGP_CBAJ_T0066896.1 MGP_CBAJ_G0028313.1 mouse_genomes_project 4 126180674 126184411 - Rnf220 protein_coding processed_transcript MGP_CBAJ_T0066897.1 MGP_CBAJ_G0028313.1 mouse_genomes_project 4 126181184 126196530 - Rnf220 protein_coding processed_transcript MGP_CBAJ_T0066898.1 MGP_CBAJ_G0028313.1 mouse_genomes_project 4 126204982 126417375 - Rnf220 protein_coding processed_transcript MGP_CBAJ_T0066899.1 MGP_CBAJ_G0028313.1 mouse_genomes_project 4 126410690 126415466 - Rnf220 protein_coding processed_transcript MGP_CBAJ_T0014503.1 MGP_CBAJ_G0012615.1 mouse_genomes_project 4 117358268 117358504 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067515.1 MGP_CBAJ_G0028470.1 mouse_genomes_project 4 138980012 138999980 + MGP_CBAJ_P0067515 Trim62 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067516.1 MGP_CBAJ_G0028470.1 mouse_genomes_project 4 138980020 139007598 + MGP_CBAJ_P0067516 Trim62 protein_coding protein_coding MGP_CBAJ_T0065180.1 MGP_CBAJ_G0027917.1 mouse_genomes_project 4 47405593 47491982 + MGP_CBAJ_P0065180 Tmod1 protein_coding protein_coding MGP_CBAJ_T0065181.1 MGP_CBAJ_G0027917.1 mouse_genomes_project 4 47405867 47459676 + MGP_CBAJ_P0065181 Tmod1 protein_coding protein_coding MGP_CBAJ_T0065182.1 MGP_CBAJ_G0027917.1 mouse_genomes_project 4 47446205 47468599 + Tmod1 protein_coding processed_transcript MGP_CBAJ_T0065183.1 MGP_CBAJ_G0027917.1 mouse_genomes_project 4 47451695 47459660 + Tmod1 protein_coding processed_transcript MGP_CBAJ_T0065184.1 MGP_CBAJ_G0027917.1 mouse_genomes_project 4 47469133 47490429 + Tmod1 protein_coding processed_transcript MGP_CBAJ_T0064794.1 MGP_CBAJ_G0027846.1 mouse_genomes_project 4 42604242 42604997 - MGP_CBAJ_P0064794 Ccl27b protein_coding protein_coding MGP_CBAJ_T0067308.1 MGP_CBAJ_G0028421.1 mouse_genomes_project 4 134621153 134650223 - MGP_CBAJ_P0067308 Cdca8 protein_coding protein_coding MGP_CBAJ_T0067309.1 MGP_CBAJ_G0028421.1 mouse_genomes_project 4 134621799 134650179 - MGP_CBAJ_P0067309 Cdca8 protein_coding protein_coding MGP_CBAJ_T0067310.1 MGP_CBAJ_G0028421.1 mouse_genomes_project 4 134622244 134649713 - Cdca8 protein_coding processed_transcript MGP_CBAJ_T0067311.1 MGP_CBAJ_G0028421.1 mouse_genomes_project 4 134626312 134650087 - Cdca8 protein_coding processed_transcript MGP_CBAJ_T0067312.1 MGP_CBAJ_G0028421.1 mouse_genomes_project 4 134626492 134650148 - Cdca8 protein_coding retained_intron MGP_CBAJ_T0067313.1 MGP_CBAJ_G0028421.1 mouse_genomes_project 4 134629370 134652617 - MGP_CBAJ_P0067313 Cdca8 protein_coding protein_coding MGP_CBAJ_T0068983.1 MGP_CBAJ_G0028814.1 mouse_genomes_project 4 164294551 164325452 + MGP_CBAJ_P0068983 Slc2a5 protein_coding protein_coding MGP_CBAJ_T0068984.1 MGP_CBAJ_G0028814.1 mouse_genomes_project 4 164308132 164321324 + Slc2a5 protein_coding processed_transcript MGP_CBAJ_T0068985.1 MGP_CBAJ_G0028814.1 mouse_genomes_project 4 164320636 164323534 + Slc2a5 protein_coding retained_intron MGP_CBAJ_T0068986.1 MGP_CBAJ_G0028814.1 mouse_genomes_project 4 164320837 164324119 + Slc2a5 protein_coding processed_transcript MGP_CBAJ_T0014203.1 MGP_CBAJ_G0012315.1 mouse_genomes_project 4 3271861 3272305 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100538.1 MGP_CBAJ_G0038793.1 mouse_genomes_project 4 57855089 57855304 - Gm25419 snoRNA snoRNA MGP_CBAJ_T0068319.1 MGP_CBAJ_G0028642.1 mouse_genomes_project 4 149055396 149067120 - MGP_CBAJ_P0068319 protein_coding protein_coding MGP_CBAJ_T0068936.1 MGP_CBAJ_G0028805.1 mouse_genomes_project 4 163537999 163541028 + MGP_CBAJ_P0068936 Lzic protein_coding protein_coding MGP_CBAJ_T0068937.1 MGP_CBAJ_G0028805.1 mouse_genomes_project 4 163538001 163541056 + MGP_CBAJ_P0068937 Lzic protein_coding protein_coding MGP_CBAJ_T0068938.1 MGP_CBAJ_G0028805.1 mouse_genomes_project 4 163538010 163538512 + Lzic protein_coding processed_transcript MGP_CBAJ_T0068939.1 MGP_CBAJ_G0028805.1 mouse_genomes_project 4 163538064 163549789 + MGP_CBAJ_P0068939 Lzic protein_coding protein_coding MGP_CBAJ_T0068940.1 MGP_CBAJ_G0028805.1 mouse_genomes_project 4 163538103 163538774 + Lzic protein_coding processed_transcript MGP_CBAJ_T0098166.1 MGP_CBAJ_G0036439.1 mouse_genomes_project 4 53964929 53965362 + Gm24943 ribozyme ribozyme MGP_CBAJ_T0066422.1 MGP_CBAJ_G0028217.1 mouse_genomes_project 4 116667047 116680455 + MGP_CBAJ_P0066422 Coa7 protein_coding protein_coding MGP_CBAJ_T0066423.1 MGP_CBAJ_G0028217.1 mouse_genomes_project 4 116667060 116677362 + Coa7 protein_coding processed_transcript MGP_CBAJ_T0066424.1 MGP_CBAJ_G0028217.1 mouse_genomes_project 4 116667063 116677594 + Coa7 protein_coding processed_transcript MGP_CBAJ_T0066425.1 MGP_CBAJ_G0028217.1 mouse_genomes_project 4 116667085 116677089 + Coa7 protein_coding processed_transcript MGP_CBAJ_T0066426.1 MGP_CBAJ_G0028217.1 mouse_genomes_project 4 116667096 116671554 + Coa7 protein_coding processed_transcript MGP_CBAJ_T0066826.1 MGP_CBAJ_G0028302.1 mouse_genomes_project 4 125829535 125836642 - MGP_CBAJ_P0066826 Urod protein_coding protein_coding MGP_CBAJ_T0066827.1 MGP_CBAJ_G0028302.1 mouse_genomes_project 4 125832445 125833894 - Urod protein_coding retained_intron MGP_CBAJ_T0066828.1 MGP_CBAJ_G0028302.1 mouse_genomes_project 4 125832513 125834115 - Urod protein_coding retained_intron MGP_CBAJ_T0066829.1 MGP_CBAJ_G0028302.1 mouse_genomes_project 4 125833304 125836593 - Urod protein_coding retained_intron MGP_CBAJ_T0066830.1 MGP_CBAJ_G0028302.1 mouse_genomes_project 4 125833689 125836586 - MGP_CBAJ_P0066830 Urod protein_coding protein_coding MGP_CBAJ_T0066831.1 MGP_CBAJ_G0028302.1 mouse_genomes_project 4 125834512 125836575 - Urod protein_coding retained_intron MGP_CBAJ_T0066832.1 MGP_CBAJ_G0028302.1 mouse_genomes_project 4 125835012 125836574 - Urod protein_coding retained_intron MGP_CBAJ_T0066833.1 MGP_CBAJ_G0028302.1 mouse_genomes_project 4 125835181 125835826 - Urod protein_coding processed_transcript MGP_CBAJ_T0066834.1 MGP_CBAJ_G0028302.1 mouse_genomes_project 4 125835336 125836569 - Urod protein_coding retained_intron MGP_CBAJ_T0066835.1 MGP_CBAJ_G0028302.1 mouse_genomes_project 4 125835508 125836609 - Urod protein_coding retained_intron MGP_CBAJ_T0014233.1 MGP_CBAJ_G0012345.1 mouse_genomes_project 4 13752863 13754185 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064372.1 MGP_CBAJ_G0027745.1 mouse_genomes_project 4 13652569 13680837 - MGP_CBAJ_P0064372 Decr1 protein_coding protein_coding MGP_CBAJ_T0064373.1 MGP_CBAJ_G0027745.1 mouse_genomes_project 4 13668306 13680605 - Decr1 protein_coding processed_transcript MGP_CBAJ_T0064374.1 MGP_CBAJ_G0027745.1 mouse_genomes_project 4 13679020 13679819 - Decr1 protein_coding processed_transcript MGP_CBAJ_T0014482.1 MGP_CBAJ_G0012594.1 mouse_genomes_project 4 110830903 110831119 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010505.1 MGP_CBAJ_G0008643.1 mouse_genomes_project 4 142989764 142989860 + Gm25707 miRNA miRNA MGP_CBAJ_T0064529.1 MGP_CBAJ_G0027784.1 mouse_genomes_project 4 32454245 32455373 + MGP_CBAJ_P0064529 Lyrm2 protein_coding protein_coding MGP_CBAJ_T0064530.1 MGP_CBAJ_G0027784.1 mouse_genomes_project 4 32454271 32455549 + Lyrm2 protein_coding retained_intron MGP_CBAJ_T0064531.1 MGP_CBAJ_G0027784.1 mouse_genomes_project 4 32454274 32454965 + Lyrm2 protein_coding retained_intron MGP_CBAJ_T0100527.1 MGP_CBAJ_G0038782.1 mouse_genomes_project 4 41986558 41986639 - Gm24837 snoRNA snoRNA MGP_CBAJ_T0099255.1 MGP_CBAJ_G0037510.1 mouse_genomes_project 4 42093889 42093997 - Gm26049 snRNA snRNA MGP_CBAJ_T0068113.1 MGP_CBAJ_G0028590.1 mouse_genomes_project 4 145530476 145545646 + MGP_CBAJ_P0068113 Paqr7 protein_coding protein_coding MGP_CBAJ_T0068114.1 MGP_CBAJ_G0028590.1 mouse_genomes_project 4 145530754 145544039 + MGP_CBAJ_P0068114 Paqr7 protein_coding protein_coding MGP_CBAJ_T0068115.1 MGP_CBAJ_G0028590.1 mouse_genomes_project 4 145530754 145544370 + MGP_CBAJ_P0068115 Paqr7 protein_coding protein_coding MGP_CBAJ_T0068116.1 MGP_CBAJ_G0028590.1 mouse_genomes_project 4 145530760 145544099 + MGP_CBAJ_P0068116 Paqr7 protein_coding protein_coding MGP_CBAJ_T0068117.1 MGP_CBAJ_G0028590.1 mouse_genomes_project 4 145530783 145547030 + MGP_CBAJ_P0068117 Paqr7 protein_coding protein_coding MGP_CBAJ_T0068118.1 MGP_CBAJ_G0028590.1 mouse_genomes_project 4 145530820 145543819 + Paqr7 protein_coding processed_transcript MGP_CBAJ_T0014333.1 MGP_CBAJ_G0012445.1 mouse_genomes_project 4 46390823 46391182 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0066925.1 MGP_CBAJ_G0028320.1 mouse_genomes_project 4 126819838 126833787 - MGP_CBAJ_P0066925 B4galt2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066931.1 MGP_CBAJ_G0028320.1 mouse_genomes_project 4 126823646 126834108 - MGP_CBAJ_P0066931 B4galt2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066932.1 MGP_CBAJ_G0028320.1 mouse_genomes_project 4 126823756 126834119 - MGP_CBAJ_P0066932 B4galt2 protein_coding protein_coding MGP_CBAJ_T0066933.1 MGP_CBAJ_G0028320.1 mouse_genomes_project 4 126823927 126833744 - MGP_CBAJ_P0066933 B4galt2 protein_coding protein_coding MGP_CBAJ_T0066935.1 MGP_CBAJ_G0028320.1 mouse_genomes_project 4 126828189 126833787 - MGP_CBAJ_P0066935 B4galt2 protein_coding protein_coding MGP_CBAJ_T0066936.1 MGP_CBAJ_G0028320.1 mouse_genomes_project 4 126831650 126833851 - B4galt2 protein_coding processed_transcript MGP_CBAJ_T0066937.1 MGP_CBAJ_G0028320.1 mouse_genomes_project 4 126832024 126832923 - MGP_CBAJ_P0066937 B4galt2 protein_coding protein_coding MGP_CBAJ_T0065880.1 MGP_CBAJ_G0028096.1 mouse_genomes_project 4 94808863 94809901 + MGP_CBAJ_P0065880 Gm26566 protein_coding protein_coding MGP_CBAJ_T0099309.1 MGP_CBAJ_G0037564.1 mouse_genomes_project 4 143600633 143600740 - Gm24913 snRNA snRNA MGP_CBAJ_T0007891.1 MGP_CBAJ_G0006432.1 mouse_genomes_project 4 144702339 144703536 + Gm12974 lincRNA lincRNA MGP_CBAJ_T0068575.1 MGP_CBAJ_G0028699.1 mouse_genomes_project 4 153442746 153473056 + MGP_CBAJ_P0068575 Spata21 protein_coding protein_coding MGP_CBAJ_T0068576.1 MGP_CBAJ_G0028699.1 mouse_genomes_project 4 153464158 153471842 + Spata21 protein_coding retained_intron MGP_CBAJ_T0064164.1 MGP_CBAJ_G0027701.1 mouse_genomes_project 4 426452 469815 - MGP_CBAJ_P0064164 Plag1 protein_coding protein_coding MGP_CBAJ_T0064165.1 MGP_CBAJ_G0027701.1 mouse_genomes_project 4 430346 469838 - MGP_CBAJ_P0064165 Plag1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064166.1 MGP_CBAJ_G0027701.1 mouse_genomes_project 4 431005 469856 - MGP_CBAJ_P0064166 Plag1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064167.1 MGP_CBAJ_G0027701.1 mouse_genomes_project 4 437313 469826 - Plag1 protein_coding retained_intron MGP_CBAJ_T0007739.1 MGP_CBAJ_G0006321.1 mouse_genomes_project 4 50631730 50699656 + lincRNA lincRNA MGP_CBAJ_T0066509.1 MGP_CBAJ_G0028234.1 mouse_genomes_project 4 117768088 117870687 + MGP_CBAJ_P0066509 Eps15 protein_coding protein_coding MGP_CBAJ_T0066510.1 MGP_CBAJ_G0028234.1 mouse_genomes_project 4 117768123 117868557 + MGP_CBAJ_P0066510 Eps15 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066511.1 MGP_CBAJ_G0028234.1 mouse_genomes_project 4 117768196 117800317 + MGP_CBAJ_P0066511 Eps15 protein_coding protein_coding MGP_CBAJ_T0066512.1 MGP_CBAJ_G0028234.1 mouse_genomes_project 4 117768232 117868340 + MGP_CBAJ_P0066512 Eps15 protein_coding protein_coding MGP_CBAJ_T0066513.1 MGP_CBAJ_G0028234.1 mouse_genomes_project 4 117768232 117868340 + MGP_CBAJ_P0066513 Eps15 protein_coding protein_coding MGP_CBAJ_T0066514.1 MGP_CBAJ_G0028234.1 mouse_genomes_project 4 117791866 117793322 + Eps15 protein_coding retained_intron MGP_CBAJ_T0066515.1 MGP_CBAJ_G0028234.1 mouse_genomes_project 4 117796561 117800620 + Eps15 protein_coding retained_intron MGP_CBAJ_T0066516.1 MGP_CBAJ_G0028234.1 mouse_genomes_project 4 117832271 117869436 + MGP_CBAJ_P0066516 Eps15 protein_coding protein_coding MGP_CBAJ_T0066517.1 MGP_CBAJ_G0028234.1 mouse_genomes_project 4 117832465 117849798 + Eps15 protein_coding retained_intron MGP_CBAJ_T0066518.1 MGP_CBAJ_G0028234.1 mouse_genomes_project 4 117853421 117868653 + MGP_CBAJ_P0066518 Eps15 protein_coding protein_coding MGP_CBAJ_T0066519.1 MGP_CBAJ_G0028234.1 mouse_genomes_project 4 117853465 117865743 + Eps15 protein_coding processed_transcript MGP_CBAJ_T0067653.1 MGP_CBAJ_G0028496.1 mouse_genomes_project 4 139896810 139897970 - Ccdc28b protein_coding processed_transcript MGP_CBAJ_T0067654.1 MGP_CBAJ_G0028496.1 mouse_genomes_project 4 139896810 139901302 - MGP_CBAJ_P0067654 Ccdc28b protein_coding protein_coding MGP_CBAJ_T0067655.1 MGP_CBAJ_G0028496.1 mouse_genomes_project 4 139896811 139898293 - Ccdc28b protein_coding retained_intron MGP_CBAJ_T0067656.1 MGP_CBAJ_G0028496.1 mouse_genomes_project 4 139896812 139898799 - Ccdc28b protein_coding processed_transcript MGP_CBAJ_T0067657.1 MGP_CBAJ_G0028496.1 mouse_genomes_project 4 139896812 139901192 - MGP_CBAJ_P0067657 Ccdc28b protein_coding nonsense_mediated_decay MGP_CBAJ_T0067658.1 MGP_CBAJ_G0028496.1 mouse_genomes_project 4 139897853 139901233 - MGP_CBAJ_P0067658 Ccdc28b protein_coding protein_coding MGP_CBAJ_T0067659.1 MGP_CBAJ_G0028496.1 mouse_genomes_project 4 139898126 139900080 - Ccdc28b protein_coding processed_transcript MGP_CBAJ_T0067660.1 MGP_CBAJ_G0028496.1 mouse_genomes_project 4 139898380 139901241 - MGP_CBAJ_P0067660 Ccdc28b protein_coding protein_coding MGP_CBAJ_T0067661.1 MGP_CBAJ_G0028496.1 mouse_genomes_project 4 139899532 139901199 - Ccdc28b protein_coding retained_intron MGP_CBAJ_T0067662.1 MGP_CBAJ_G0028496.1 mouse_genomes_project 4 139900654 139901254 - Ccdc28b protein_coding retained_intron MGP_CBAJ_T0014521.1 MGP_CBAJ_G0012633.1 mouse_genomes_project 4 125187644 125188061 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0066528.1 MGP_CBAJ_G0028236.1 mouse_genomes_project 4 117935761 117963375 - MGP_CBAJ_P0066528 Rnf11 protein_coding protein_coding MGP_CBAJ_T0066529.1 MGP_CBAJ_G0028236.1 mouse_genomes_project 4 117937562 117963682 - MGP_CBAJ_P0066529 Rnf11 protein_coding protein_coding MGP_CBAJ_T0066530.1 MGP_CBAJ_G0028236.1 mouse_genomes_project 4 117938947 117971418 - MGP_CBAJ_P0066530 Rnf11 protein_coding protein_coding MGP_CBAJ_T0069143.1 MGP_CBAJ_G0028844.1 mouse_genomes_project 4 166883960 166890695 + Rpl22 protein_coding processed_transcript MGP_CBAJ_T0069144.1 MGP_CBAJ_G0028844.1 mouse_genomes_project 4 166884071 166890699 + MGP_CBAJ_P0069144 Rpl22 protein_coding protein_coding MGP_CBAJ_T0069145.1 MGP_CBAJ_G0028844.1 mouse_genomes_project 4 166884085 166892290 + MGP_CBAJ_P0069145 Rpl22 protein_coding protein_coding MGP_CBAJ_T0069146.1 MGP_CBAJ_G0028844.1 mouse_genomes_project 4 166884087 166892289 + MGP_CBAJ_P0069146 Rpl22 protein_coding protein_coding MGP_CBAJ_T0069147.1 MGP_CBAJ_G0028844.1 mouse_genomes_project 4 166885285 166888265 + Rpl22 protein_coding processed_transcript MGP_CBAJ_T0069148.1 MGP_CBAJ_G0028844.1 mouse_genomes_project 4 166885344 166888494 + Rpl22 protein_coding processed_transcript MGP_CBAJ_T0069149.1 MGP_CBAJ_G0028844.1 mouse_genomes_project 4 166885698 166890692 + Rpl22 protein_coding processed_transcript MGP_CBAJ_T0069150.1 MGP_CBAJ_G0028844.1 mouse_genomes_project 4 166885775 166890693 + Rpl22 protein_coding processed_transcript MGP_CBAJ_T0014510.1 MGP_CBAJ_G0012622.1 mouse_genomes_project 4 120506599 120507649 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099289.1 MGP_CBAJ_G0037544.1 mouse_genomes_project 4 123183283 123183416 - Gm23230 snRNA snRNA MGP_CBAJ_T0099291.1 MGP_CBAJ_G0037546.1 mouse_genomes_project 4 125738196 125738301 + Gm26355 snRNA snRNA MGP_CBAJ_T0065641.1 MGP_CBAJ_G0028047.1 mouse_genomes_project 4 74458185 74586455 - MGP_CBAJ_P0065641 Megf9 protein_coding protein_coding MGP_CBAJ_T0065642.1 MGP_CBAJ_G0028047.1 mouse_genomes_project 4 74503781 74586522 - MGP_CBAJ_P0065642 Megf9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066567.1 MGP_CBAJ_G0028244.1 mouse_genomes_project 4 120422077 120559886 + MGP_CBAJ_P0066567 Spata6 protein_coding protein_coding MGP_CBAJ_T0066568.1 MGP_CBAJ_G0028244.1 mouse_genomes_project 4 120422102 120480457 + MGP_CBAJ_P0066568 Spata6 protein_coding protein_coding MGP_CBAJ_T0066569.1 MGP_CBAJ_G0028244.1 mouse_genomes_project 4 120422103 120535827 + Spata6 protein_coding processed_transcript MGP_CBAJ_T0066570.1 MGP_CBAJ_G0028244.1 mouse_genomes_project 4 120422131 120492842 + MGP_CBAJ_P0066570 Spata6 protein_coding protein_coding MGP_CBAJ_T0066571.1 MGP_CBAJ_G0028244.1 mouse_genomes_project 4 120422152 120480517 + Spata6 protein_coding processed_transcript MGP_CBAJ_T0066572.1 MGP_CBAJ_G0028244.1 mouse_genomes_project 4 120422156 120493562 + Spata6 protein_coding processed_transcript MGP_CBAJ_T0066573.1 MGP_CBAJ_G0028244.1 mouse_genomes_project 4 120422196 120494148 + Spata6 protein_coding processed_transcript MGP_CBAJ_T0066574.1 MGP_CBAJ_G0028244.1 mouse_genomes_project 4 120422222 120493612 + Spata6 protein_coding processed_transcript MGP_CBAJ_T0066575.1 MGP_CBAJ_G0028244.1 mouse_genomes_project 4 120422298 120559928 + MGP_CBAJ_P0066575 Spata6 protein_coding protein_coding MGP_CBAJ_T0066576.1 MGP_CBAJ_G0028244.1 mouse_genomes_project 4 120489350 120558938 + Spata6 protein_coding processed_transcript MGP_CBAJ_T0066577.1 MGP_CBAJ_G0028244.1 mouse_genomes_project 4 120492112 120559878 + Spata6 protein_coding processed_transcript MGP_CBAJ_T0066578.1 MGP_CBAJ_G0028244.1 mouse_genomes_project 4 120492151 120494823 + Spata6 protein_coding processed_transcript MGP_CBAJ_T0066579.1 MGP_CBAJ_G0028244.1 mouse_genomes_project 4 120534716 120551365 + Spata6 protein_coding processed_transcript MGP_CBAJ_T0066580.1 MGP_CBAJ_G0028244.1 mouse_genomes_project 4 120550826 120558946 + Spata6 protein_coding processed_transcript MGP_CBAJ_T0001370.1 MGP_CBAJ_G0001296.1 mouse_genomes_project 4 20837967 20846274 + TEC TEC MGP_CBAJ_T0068651.1 MGP_CBAJ_G0028719.1 mouse_genomes_project 4 154323987 154357619 - MGP_CBAJ_P0068651 Dnajc16 protein_coding protein_coding MGP_CBAJ_T0068652.1 MGP_CBAJ_G0028719.1 mouse_genomes_project 4 154333587 154338367 - Dnajc16 protein_coding processed_transcript MGP_CBAJ_T0068653.1 MGP_CBAJ_G0028719.1 mouse_genomes_project 4 154349983 154357659 - MGP_CBAJ_P0068653 Dnajc16 protein_coding protein_coding MGP_CBAJ_T0007901.1 MGP_CBAJ_G0006439.1 mouse_genomes_project 4 149023397 149024514 - 2810405F17Rik lincRNA lincRNA MGP_CBAJ_T0068881.1 MGP_CBAJ_G0028794.1 mouse_genomes_project 4 162524381 162564703 + MGP_CBAJ_P0068881 Gm572 protein_coding protein_coding MGP_CBAJ_T0007730.1 MGP_CBAJ_G0006313.1 mouse_genomes_project 4 44005009 44012058 + Gm26881 lincRNA lincRNA MGP_CBAJ_T0014584.1 MGP_CBAJ_G0012696.1 mouse_genomes_project 4 146661775 146662243 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0068203.1 MGP_CBAJ_G0028611.1 mouse_genomes_project 4 147071539 147136243 + MGP_CBAJ_P0068203 Myom3 protein_coding protein_coding MGP_CBAJ_T0068204.1 MGP_CBAJ_G0028611.1 mouse_genomes_project 4 147112499 147136243 + Myom3 protein_coding retained_intron MGP_CBAJ_T0068205.1 MGP_CBAJ_G0028611.1 mouse_genomes_project 4 147117379 147122731 + Myom3 protein_coding retained_intron MGP_CBAJ_T0010485.1 MGP_CBAJ_G0008623.1 mouse_genomes_project 4 115657095 115657180 + Gm24804 miRNA miRNA MGP_CBAJ_T0068943.1 MGP_CBAJ_G0028807.1 mouse_genomes_project 4 163646357 163721183 + MGP_CBAJ_P0068943 Clstn1 protein_coding protein_coding MGP_CBAJ_T0068944.1 MGP_CBAJ_G0028807.1 mouse_genomes_project 4 163646571 163721187 + MGP_CBAJ_P0068944 Clstn1 protein_coding protein_coding MGP_CBAJ_T0068945.1 MGP_CBAJ_G0028807.1 mouse_genomes_project 4 163647137 163699257 + Clstn1 protein_coding processed_transcript MGP_CBAJ_T0068946.1 MGP_CBAJ_G0028807.1 mouse_genomes_project 4 163699061 163704133 + Clstn1 protein_coding retained_intron MGP_CBAJ_T0066616.1 MGP_CBAJ_G0028256.1 mouse_genomes_project 4 123306557 123345539 - MGP_CBAJ_P0066616 Cmpk1 protein_coding protein_coding MGP_CBAJ_T0066617.1 MGP_CBAJ_G0028256.1 mouse_genomes_project 4 123317807 123345447 - MGP_CBAJ_P0066617 Cmpk1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066618.1 MGP_CBAJ_G0028256.1 mouse_genomes_project 4 123323738 123345370 - MGP_CBAJ_P0066618 Cmpk1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066619.1 MGP_CBAJ_G0028256.1 mouse_genomes_project 4 123343115 123345447 - Cmpk1 protein_coding processed_transcript MGP_CBAJ_T0014408.1 MGP_CBAJ_G0012520.1 mouse_genomes_project 4 79676458 79677839 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014600.1 MGP_CBAJ_G0012712.1 mouse_genomes_project 4 156020870 156022215 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0068064.1 MGP_CBAJ_G0028577.1 mouse_genomes_project 4 145178803 145203246 - MGP_CBAJ_P0068064 Catsper4 protein_coding protein_coding MGP_CBAJ_T0068065.1 MGP_CBAJ_G0028577.1 mouse_genomes_project 4 145178803 145203246 - MGP_CBAJ_P0068065 Catsper4 protein_coding protein_coding MGP_CBAJ_T0068066.1 MGP_CBAJ_G0028577.1 mouse_genomes_project 4 145198226 145203235 - MGP_CBAJ_P0068066 Catsper4 protein_coding protein_coding MGP_CBAJ_T0068067.1 MGP_CBAJ_G0028577.1 mouse_genomes_project 4 145202360 145203213 - Catsper4 protein_coding processed_transcript MGP_CBAJ_T0014286.1 MGP_CBAJ_G0012398.1 mouse_genomes_project 4 27805178 27805595 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098041.1 MGP_CBAJ_G0036314.1 mouse_genomes_project 4 44717574 44717706 + Gm23257 rRNA rRNA MGP_CBAJ_T0066656.1 MGP_CBAJ_G0028269.1 mouse_genomes_project 4 124386680 124433259 + MGP_CBAJ_P0066656 Efcab14 protein_coding protein_coding MGP_CBAJ_T0066657.1 MGP_CBAJ_G0028269.1 mouse_genomes_project 4 124386715 124407244 + Efcab14 protein_coding processed_transcript MGP_CBAJ_T0066658.1 MGP_CBAJ_G0028269.1 mouse_genomes_project 4 124386715 124428308 + MGP_CBAJ_P0066658 Efcab14 protein_coding protein_coding MGP_CBAJ_T0066659.1 MGP_CBAJ_G0028269.1 mouse_genomes_project 4 124386716 124402882 + Efcab14 protein_coding processed_transcript MGP_CBAJ_T0066660.1 MGP_CBAJ_G0028269.1 mouse_genomes_project 4 124387009 124436149 + MGP_CBAJ_P0066660 Efcab14 protein_coding protein_coding MGP_CBAJ_T0066661.1 MGP_CBAJ_G0028269.1 mouse_genomes_project 4 124387379 124432902 + MGP_CBAJ_P0066661 Efcab14 protein_coding protein_coding MGP_CBAJ_T0066662.1 MGP_CBAJ_G0028269.1 mouse_genomes_project 4 124422867 124434012 + Efcab14 protein_coding processed_transcript MGP_CBAJ_T0014456.1 MGP_CBAJ_G0012568.1 mouse_genomes_project 4 100211371 100211681 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101923.1 MGP_CBAJ_G0039954.1 mouse_genomes_project 4 156410273 156412516 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010458.1 MGP_CBAJ_G0008596.1 mouse_genomes_project 4 36823014 36823091 + Mir873b miRNA miRNA MGP_CBAJ_T0017780.1 MGP_CBAJ_G0015280.1 mouse_genomes_project 4 23674728 23964074 + processed_transcript processed_transcript MGP_CBAJ_T0010529.1 MGP_CBAJ_G0008667.1 mouse_genomes_project 4 164233742 164233844 + Mir34a miRNA miRNA MGP_CBAJ_T0007756.1 MGP_CBAJ_G0006334.1 mouse_genomes_project 4 60153617 60159894 - lincRNA lincRNA MGP_CBAJ_T0007757.1 MGP_CBAJ_G0006334.1 mouse_genomes_project 4 60153941 60159913 - lincRNA lincRNA MGP_CBAJ_T0007758.1 MGP_CBAJ_G0006334.1 mouse_genomes_project 4 60154043 60159873 - lincRNA lincRNA MGP_CBAJ_T0067547.1 MGP_CBAJ_G0028476.1 mouse_genomes_project 4 139279884 139287485 + MGP_CBAJ_P0067547 Fndc5 protein_coding protein_coding MGP_CBAJ_T0014504.1 MGP_CBAJ_G0012616.1 mouse_genomes_project 4 117856575 117857734 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064323.1 MGP_CBAJ_G0027731.1 mouse_genomes_project 4 9115114 9177088 + MGP_CBAJ_P0064323 Cdh17 protein_coding protein_coding MGP_CBAJ_T0064324.1 MGP_CBAJ_G0027731.1 mouse_genomes_project 4 9115160 9170971 + MGP_CBAJ_P0064324 Cdh17 protein_coding protein_coding MGP_CBAJ_T0066533.1 MGP_CBAJ_G0028238.1 mouse_genomes_project 4 118162463 118166900 - MGP_CBAJ_P0066533 Cdkn2c protein_coding protein_coding MGP_CBAJ_T0066534.1 MGP_CBAJ_G0028238.1 mouse_genomes_project 4 118162463 118168717 - MGP_CBAJ_P0066534 Cdkn2c protein_coding protein_coding MGP_CBAJ_T0010448.1 MGP_CBAJ_G0008586.1 mouse_genomes_project 4 10697168 10697234 - Gm26250 miRNA miRNA MGP_CBAJ_T0014271.1 MGP_CBAJ_G0012383.1 mouse_genomes_project 4 24622852 24623237 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0069433.1 MGP_CBAJ_G0028896.1 mouse_genomes_project 4 170902186 170904634 + MGP_CBAJ_P0069433 Mxra8 protein_coding protein_coding MGP_CBAJ_T0069434.1 MGP_CBAJ_G0028896.1 mouse_genomes_project 4 170902232 170906547 + MGP_CBAJ_P0069434 Mxra8 protein_coding protein_coding MGP_CBAJ_T0069435.1 MGP_CBAJ_G0028896.1 mouse_genomes_project 4 170902336 170903785 + Mxra8 protein_coding retained_intron MGP_CBAJ_T0069436.1 MGP_CBAJ_G0028896.1 mouse_genomes_project 4 170904806 170905413 + Mxra8 protein_coding retained_intron MGP_CBAJ_T0069437.1 MGP_CBAJ_G0028896.1 mouse_genomes_project 4 170904889 170905913 + Mxra8 protein_coding retained_intron MGP_CBAJ_T0069438.1 MGP_CBAJ_G0028896.1 mouse_genomes_project 4 170904910 170906030 + Mxra8 protein_coding retained_intron MGP_CBAJ_T0069439.1 MGP_CBAJ_G0028896.1 mouse_genomes_project 4 170905361 170906224 + Mxra8 protein_coding processed_transcript MGP_CBAJ_T0010449.1 MGP_CBAJ_G0008587.1 mouse_genomes_project 4 11082307 11082428 - Gm23162 miRNA miRNA MGP_CBAJ_T0066189.1 MGP_CBAJ_G0028172.1 mouse_genomes_project 4 110965251 111026445 - MGP_CBAJ_P0066189 4921539E11Rik protein_coding protein_coding MGP_CBAJ_T0066190.1 MGP_CBAJ_G0028172.1 mouse_genomes_project 4 110965251 111026445 - MGP_CBAJ_P0066190 4921539E11Rik protein_coding protein_coding MGP_CBAJ_T0066191.1 MGP_CBAJ_G0028172.1 mouse_genomes_project 4 110972297 111026445 - MGP_CBAJ_P0066191 4921539E11Rik protein_coding protein_coding MGP_CBAJ_T0065317.1 MGP_CBAJ_G0027953.1 mouse_genomes_project 4 51581809 51784924 - MGP_CBAJ_P0065317 Grin3a protein_coding protein_coding MGP_CBAJ_T0065318.1 MGP_CBAJ_G0027953.1 mouse_genomes_project 4 51581809 51784924 - MGP_CBAJ_P0065318 Grin3a protein_coding protein_coding MGP_CBAJ_T0065320.1 MGP_CBAJ_G0027953.1 mouse_genomes_project 4 51624031 51647856 - Grin3a protein_coding processed_transcript MGP_CBAJ_T0065321.1 MGP_CBAJ_G0027953.1 mouse_genomes_project 4 51694334 51785119 - Grin3a protein_coding processed_transcript MGP_CBAJ_T0100571.1 MGP_CBAJ_G0038826.1 mouse_genomes_project 4 126031838 126031917 - Snord55 snoRNA snoRNA MGP_CBAJ_T0014331.1 MGP_CBAJ_G0012443.1 mouse_genomes_project 4 45475353 45475985 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0068261.1 MGP_CBAJ_G0028623.1 mouse_genomes_project 4 147553921 147579665 + MGP_CBAJ_P0068261 E2f2 protein_coding protein_coding MGP_CBAJ_T0068262.1 MGP_CBAJ_G0028623.1 mouse_genomes_project 4 147562310 147570456 + E2f2 protein_coding processed_transcript MGP_CBAJ_T0099249.1 MGP_CBAJ_G0037504.1 mouse_genomes_project 4 36933158 36933265 + Gm23314 snRNA snRNA MGP_CBAJ_T0067619.1 MGP_CBAJ_G0028492.1 mouse_genomes_project 4 139864257 139878614 - MGP_CBAJ_P0067619 Eif3i protein_coding protein_coding MGP_CBAJ_T0067620.1 MGP_CBAJ_G0028492.1 mouse_genomes_project 4 139865628 139873787 - Eif3i protein_coding retained_intron MGP_CBAJ_T0067621.1 MGP_CBAJ_G0028492.1 mouse_genomes_project 4 139865825 139878565 - MGP_CBAJ_P0067621 Eif3i protein_coding protein_coding MGP_CBAJ_T0067622.1 MGP_CBAJ_G0028492.1 mouse_genomes_project 4 139873145 139878565 - Eif3i protein_coding processed_transcript MGP_CBAJ_T0067623.1 MGP_CBAJ_G0028492.1 mouse_genomes_project 4 139876181 139878582 - Eif3i protein_coding retained_intron MGP_CBAJ_T0065654.1 MGP_CBAJ_G0028050.1 mouse_genomes_project 4 77055307 77057359 - MGP_CBAJ_P0065654 Aldoart1 protein_coding protein_coding MGP_CBAJ_T0065655.1 MGP_CBAJ_G0028050.1 mouse_genomes_project 4 77055307 77057357 - MGP_CBAJ_P0065655 Aldoart1 protein_coding protein_coding MGP_CBAJ_T0066945.1 MGP_CBAJ_G0028322.1 mouse_genomes_project 4 126839272 126842663 - MGP_CBAJ_P0066945 Dph2 protein_coding protein_coding MGP_CBAJ_T0066946.1 MGP_CBAJ_G0028322.1 mouse_genomes_project 4 126839536 126842651 - Dph2 protein_coding retained_intron MGP_CBAJ_T0066947.1 MGP_CBAJ_G0028322.1 mouse_genomes_project 4 126839545 126842654 - MGP_CBAJ_P0066947 Dph2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066948.1 MGP_CBAJ_G0028322.1 mouse_genomes_project 4 126841707 126842617 - Dph2 protein_coding retained_intron MGP_CBAJ_T0100573.1 MGP_CBAJ_G0038828.1 mouse_genomes_project 4 128070706 128070831 + Gm24352 snoRNA snoRNA MGP_CBAJ_T0099251.1 MGP_CBAJ_G0037506.1 mouse_genomes_project 4 40450820 40450902 + Gm22850 snRNA snRNA MGP_CBAJ_T0098387.1 MGP_CBAJ_G0036653.1 mouse_genomes_project 4 101867470 101876862 + Gm28096 sense_intronic sense_intronic MGP_CBAJ_T0011457.1 MGP_CBAJ_G0009595.1 mouse_genomes_project 4 143928168 143928456 - Gm24636 misc_RNA misc_RNA MGP_CBAJ_T0011430.1 MGP_CBAJ_G0009568.1 mouse_genomes_project 4 17689178 17689468 - Gm25655 misc_RNA misc_RNA MGP_CBAJ_T0065909.1 MGP_CBAJ_G0028109.1 mouse_genomes_project 4 98548468 98551361 - MGP_CBAJ_P0065909 Izumo3 protein_coding protein_coding MGP_CBAJ_T0065910.1 MGP_CBAJ_G0028109.1 mouse_genomes_project 4 98548477 98551374 - MGP_CBAJ_P0065910 Izumo3 protein_coding protein_coding MGP_CBAJ_T0065838.1 MGP_CBAJ_G0028082.1 mouse_genomes_project 4 92877223 93171533 - MGP_CBAJ_P0065838 Slc24a2 protein_coding protein_coding MGP_CBAJ_T0065839.1 MGP_CBAJ_G0028082.1 mouse_genomes_project 4 92877228 93169037 - MGP_CBAJ_P0065839 Slc24a2 protein_coding protein_coding MGP_CBAJ_T0065840.1 MGP_CBAJ_G0028082.1 mouse_genomes_project 4 92885840 93168951 - MGP_CBAJ_P0065840 Slc24a2 protein_coding protein_coding MGP_CBAJ_T0065841.1 MGP_CBAJ_G0028082.1 mouse_genomes_project 4 92885840 93168947 - MGP_CBAJ_P0065841 Slc24a2 protein_coding protein_coding MGP_CBAJ_T0065842.1 MGP_CBAJ_G0028082.1 mouse_genomes_project 4 92890822 92908385 - Slc24a2 protein_coding processed_transcript MGP_CBAJ_T0065843.1 MGP_CBAJ_G0028082.1 mouse_genomes_project 4 92927967 93105328 - MGP_CBAJ_P0065843 Slc24a2 protein_coding protein_coding MGP_CBAJ_T0065844.1 MGP_CBAJ_G0028082.1 mouse_genomes_project 4 92985018 93171479 - Slc24a2 protein_coding processed_transcript MGP_CBAJ_T0065845.1 MGP_CBAJ_G0028082.1 mouse_genomes_project 4 92985406 93171478 - Slc24a2 protein_coding processed_transcript MGP_CBAJ_T0065846.1 MGP_CBAJ_G0028082.1 mouse_genomes_project 4 93104827 93171523 - Slc24a2 protein_coding processed_transcript MGP_CBAJ_T0065693.1 MGP_CBAJ_G0028057.1 mouse_genomes_project 4 85221121 85221598 + MGP_CBAJ_P0065693 protein_coding protein_coding MGP_CBAJ_T0065333.1 MGP_CBAJ_G0027959.1 mouse_genomes_project 4 55196271 55197330 - MGP_CBAJ_P0065333 Olfr273 protein_coding protein_coding MGP_CBAJ_T0065334.1 MGP_CBAJ_G0027959.1 mouse_genomes_project 4 55196315 55199224 - MGP_CBAJ_P0065334 Olfr273 protein_coding protein_coding MGP_CBAJ_T0066646.1 MGP_CBAJ_G0028266.1 mouse_genomes_project 4 124142334 124231441 + MGP_CBAJ_P0066646 protein_coding protein_coding MGP_CBAJ_T0066648.1 MGP_CBAJ_G0028266.1 mouse_genomes_project 4 124142358 124231438 + MGP_CBAJ_P0066648 protein_coding protein_coding MGP_CBAJ_T0066022.1 MGP_CBAJ_G0028136.1 mouse_genomes_project 4 105776108 105785046 + MGP_CBAJ_P0066022 L1td1 protein_coding protein_coding MGP_CBAJ_T0066023.1 MGP_CBAJ_G0028136.1 mouse_genomes_project 4 105776122 105789842 + MGP_CBAJ_P0066023 L1td1 protein_coding protein_coding MGP_CBAJ_T0066024.1 MGP_CBAJ_G0028136.1 mouse_genomes_project 4 105776167 105784962 + MGP_CBAJ_P0066024 L1td1 protein_coding protein_coding MGP_CBAJ_T0066025.1 MGP_CBAJ_G0028136.1 mouse_genomes_project 4 105784604 105789478 + MGP_CBAJ_P0066025 L1td1 protein_coding protein_coding MGP_CBAJ_T0069283.1 MGP_CBAJ_G0028869.1 mouse_genomes_project 4 169904082 169935241 - MGP_CBAJ_P0069283 Plch2 protein_coding protein_coding MGP_CBAJ_T0069284.1 MGP_CBAJ_G0028869.1 mouse_genomes_project 4 169904093 169920440 - Plch2 protein_coding retained_intron MGP_CBAJ_T0069285.1 MGP_CBAJ_G0028869.1 mouse_genomes_project 4 169904334 169931264 - MGP_CBAJ_P0069285 Plch2 protein_coding protein_coding MGP_CBAJ_T0069286.1 MGP_CBAJ_G0028869.1 mouse_genomes_project 4 169904334 169910785 - MGP_CBAJ_P0069286 Plch2 protein_coding protein_coding MGP_CBAJ_T0069287.1 MGP_CBAJ_G0028869.1 mouse_genomes_project 4 169904334 169943723 - MGP_CBAJ_P0069287 Plch2 protein_coding protein_coding MGP_CBAJ_T0069288.1 MGP_CBAJ_G0028869.1 mouse_genomes_project 4 169904340 169913613 - Plch2 protein_coding retained_intron MGP_CBAJ_T0069289.1 MGP_CBAJ_G0028869.1 mouse_genomes_project 4 169904344 169935241 - MGP_CBAJ_P0069289 Plch2 protein_coding protein_coding MGP_CBAJ_T0069290.1 MGP_CBAJ_G0028869.1 mouse_genomes_project 4 169904629 169967340 - MGP_CBAJ_P0069290 Plch2 protein_coding protein_coding MGP_CBAJ_T0069291.1 MGP_CBAJ_G0028869.1 mouse_genomes_project 4 169906666 169978941 - MGP_CBAJ_P0069291 Plch2 protein_coding protein_coding MGP_CBAJ_T0069292.1 MGP_CBAJ_G0028869.1 mouse_genomes_project 4 169922419 169935241 - MGP_CBAJ_P0069292 Plch2 protein_coding protein_coding MGP_CBAJ_T0069293.1 MGP_CBAJ_G0028869.1 mouse_genomes_project 4 169931327 169981111 - MGP_CBAJ_P0069293 Plch2 protein_coding protein_coding MGP_CBAJ_T0069294.1 MGP_CBAJ_G0028869.1 mouse_genomes_project 4 169933333 169943719 - MGP_CBAJ_P0069294 Plch2 protein_coding protein_coding MGP_CBAJ_T0068163.1 MGP_CBAJ_G0028603.1 mouse_genomes_project 4 146559055 146604149 - MGP_CBAJ_P0068163 Srrm1 protein_coding protein_coding MGP_CBAJ_T0068164.1 MGP_CBAJ_G0028603.1 mouse_genomes_project 4 146559062 146604072 - MGP_CBAJ_P0068164 Srrm1 protein_coding protein_coding MGP_CBAJ_T0068165.1 MGP_CBAJ_G0028603.1 mouse_genomes_project 4 146559665 146604072 - MGP_CBAJ_P0068165 Srrm1 protein_coding protein_coding MGP_CBAJ_T0068166.1 MGP_CBAJ_G0028603.1 mouse_genomes_project 4 146560604 146603964 - MGP_CBAJ_P0068166 Srrm1 protein_coding protein_coding MGP_CBAJ_T0068167.1 MGP_CBAJ_G0028603.1 mouse_genomes_project 4 146560861 146570425 - MGP_CBAJ_P0068167 Srrm1 protein_coding protein_coding MGP_CBAJ_T0068168.1 MGP_CBAJ_G0028603.1 mouse_genomes_project 4 146561047 146603962 - Srrm1 protein_coding retained_intron MGP_CBAJ_T0068169.1 MGP_CBAJ_G0028603.1 mouse_genomes_project 4 146562339 146563421 - Srrm1 protein_coding retained_intron MGP_CBAJ_T0068170.1 MGP_CBAJ_G0028603.1 mouse_genomes_project 4 146572370 146578399 - Srrm1 protein_coding retained_intron MGP_CBAJ_T0068171.1 MGP_CBAJ_G0028603.1 mouse_genomes_project 4 146574679 146586259 - Srrm1 protein_coding retained_intron MGP_CBAJ_T0068172.1 MGP_CBAJ_G0028603.1 mouse_genomes_project 4 146578323 146590652 - MGP_CBAJ_P0068172 Srrm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068173.1 MGP_CBAJ_G0028603.1 mouse_genomes_project 4 146586454 146590708 - Srrm1 protein_coding retained_intron MGP_CBAJ_T0068174.1 MGP_CBAJ_G0028603.1 mouse_genomes_project 4 146590600 146603970 - MGP_CBAJ_P0068174 Srrm1 protein_coding protein_coding MGP_CBAJ_T0068175.1 MGP_CBAJ_G0028603.1 mouse_genomes_project 4 146591826 146603979 - Srrm1 protein_coding retained_intron MGP_CBAJ_T0068176.1 MGP_CBAJ_G0028603.1 mouse_genomes_project 4 146592717 146595394 - MGP_CBAJ_P0068176 Srrm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068177.1 MGP_CBAJ_G0028603.1 mouse_genomes_project 4 146593881 146604030 - Srrm1 protein_coding processed_transcript MGP_CBAJ_T0066034.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106056587 106268320 - MGP_CBAJ_P0066034 Dock7 protein_coding protein_coding MGP_CBAJ_T0066035.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106056770 106074021 - Dock7 protein_coding processed_transcript MGP_CBAJ_T0066036.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106056771 106268179 - MGP_CBAJ_P0066036 Dock7 protein_coding protein_coding MGP_CBAJ_T0066037.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106056773 106154490 - MGP_CBAJ_P0066037 Dock7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066038.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106056773 106268179 - MGP_CBAJ_P0066038 Dock7 protein_coding protein_coding MGP_CBAJ_T0066039.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106057174 106074142 - MGP_CBAJ_P0066039 Dock7 protein_coding unknown_likely_coding MGP_CBAJ_T0066040.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106057174 106268179 - MGP_CBAJ_P0066040 Dock7 protein_coding protein_coding MGP_CBAJ_T0066041.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106065834 106066787 - Dock7 protein_coding retained_intron MGP_CBAJ_T0066042.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106065837 106069968 - Dock7 protein_coding retained_intron MGP_CBAJ_T0066043.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106066239 106076425 - Dock7 protein_coding processed_transcript MGP_CBAJ_T0066044.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106067144 106079697 - MGP_CBAJ_P0066044 Dock7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066045.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106075420 106154447 - MGP_CBAJ_P0066045 Dock7 protein_coding unknown_likely_coding MGP_CBAJ_T0066046.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106076790 106085712 - Dock7 protein_coding retained_intron MGP_CBAJ_T0066047.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106080566 106083920 - Dock7 protein_coding processed_transcript MGP_CBAJ_T0066048.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106113632 106137501 - MGP_CBAJ_P0066048 Dock7 protein_coding protein_coding MGP_CBAJ_T0066049.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106115716 106137466 - MGP_CBAJ_P0066049 Dock7 protein_coding protein_coding MGP_CBAJ_T0066050.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106116951 106119281 - Dock7 protein_coding retained_intron MGP_CBAJ_T0066051.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106127526 106136676 - Dock7 protein_coding processed_transcript MGP_CBAJ_T0066052.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106136136 106186321 - MGP_CBAJ_P0066052 Dock7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066056.1 MGP_CBAJ_G0028140.1 mouse_genomes_project 4 106194727 106198088 - Dock7 protein_coding retained_intron MGP_CBAJ_T0067449.1 MGP_CBAJ_G0028452.1 mouse_genomes_project 4 136878671 136889455 + MGP_CBAJ_P0067449 Sfpq protein_coding protein_coding MGP_CBAJ_T0067450.1 MGP_CBAJ_G0028452.1 mouse_genomes_project 4 136880730 136884666 + Sfpq protein_coding processed_transcript MGP_CBAJ_T0067451.1 MGP_CBAJ_G0028452.1 mouse_genomes_project 4 136880874 136897200 + Sfpq protein_coding processed_transcript MGP_CBAJ_T0067452.1 MGP_CBAJ_G0028452.1 mouse_genomes_project 4 136883273 136883964 + Sfpq protein_coding processed_transcript MGP_CBAJ_T0067453.1 MGP_CBAJ_G0028452.1 mouse_genomes_project 4 136883305 136885365 + Sfpq protein_coding processed_transcript MGP_CBAJ_T0067454.1 MGP_CBAJ_G0028452.1 mouse_genomes_project 4 136883794 136884899 + Sfpq protein_coding processed_transcript MGP_CBAJ_T0004510.1 MGP_CBAJ_G0003911.1 mouse_genomes_project 4 163376073 163393240 + Ube4bos1 antisense antisense MGP_CBAJ_T0004511.1 MGP_CBAJ_G0003911.1 mouse_genomes_project 4 163376102 163387290 + Ube4bos1 antisense antisense MGP_CBAJ_T0014579.1 MGP_CBAJ_G0012691.1 mouse_genomes_project 4 145338199 145338460 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065166.1 MGP_CBAJ_G0027914.1 mouse_genomes_project 4 47180748 47230535 + MGP_CBAJ_P0065166 Stra6l protein_coding protein_coding MGP_CBAJ_T0065167.1 MGP_CBAJ_G0027914.1 mouse_genomes_project 4 47180900 47230535 + MGP_CBAJ_P0065167 Stra6l protein_coding protein_coding MGP_CBAJ_T0065168.1 MGP_CBAJ_G0027914.1 mouse_genomes_project 4 47181031 47230535 + MGP_CBAJ_P0065168 Stra6l protein_coding protein_coding MGP_CBAJ_T0065169.1 MGP_CBAJ_G0027914.1 mouse_genomes_project 4 47181081 47201019 + Stra6l protein_coding processed_transcript MGP_CBAJ_T0065170.1 MGP_CBAJ_G0027914.1 mouse_genomes_project 4 47217543 47230145 + Stra6l protein_coding retained_intron MGP_CBAJ_T0066308.1 MGP_CBAJ_G0028200.1 mouse_genomes_project 4 115413926 115437763 - MGP_CBAJ_P0066308 Lrrc42 protein_coding protein_coding MGP_CBAJ_T0066309.1 MGP_CBAJ_G0028200.1 mouse_genomes_project 4 115413929 115427367 - Lrrc42 protein_coding retained_intron MGP_CBAJ_T0066310.1 MGP_CBAJ_G0028200.1 mouse_genomes_project 4 115414171 115416393 - Lrrc42 protein_coding retained_intron MGP_CBAJ_T0066311.1 MGP_CBAJ_G0028200.1 mouse_genomes_project 4 115414351 115423593 - MGP_CBAJ_P0066311 Lrrc42 protein_coding protein_coding MGP_CBAJ_T0066312.1 MGP_CBAJ_G0028200.1 mouse_genomes_project 4 115431643 115437391 - MGP_CBAJ_P0066312 Lrrc42 protein_coding protein_coding MGP_CBAJ_T0064269.1 MGP_CBAJ_G0027720.1 mouse_genomes_project 4 8219154 8238081 - MGP_CBAJ_P0064269 Plekhf2 protein_coding protein_coding MGP_CBAJ_T0064270.1 MGP_CBAJ_G0027720.1 mouse_genomes_project 4 8221243 8238332 - MGP_CBAJ_P0064270 Plekhf2 protein_coding protein_coding MGP_CBAJ_T0067670.1 MGP_CBAJ_G0028498.1 mouse_genomes_project 4 139945128 139977036 - MGP_CBAJ_P0067670 Kpna6 protein_coding protein_coding MGP_CBAJ_T0067671.1 MGP_CBAJ_G0028498.1 mouse_genomes_project 4 139955866 139957147 - Kpna6 protein_coding retained_intron MGP_CBAJ_T0067672.1 MGP_CBAJ_G0028498.1 mouse_genomes_project 4 139956514 139958956 - Kpna6 protein_coding retained_intron MGP_CBAJ_T0067673.1 MGP_CBAJ_G0028498.1 mouse_genomes_project 4 139959676 139976795 - MGP_CBAJ_P0067673 Kpna6 protein_coding protein_coding MGP_CBAJ_T0067674.1 MGP_CBAJ_G0028498.1 mouse_genomes_project 4 139963212 139977034 - Kpna6 protein_coding retained_intron MGP_CBAJ_T0017838.1 MGP_CBAJ_G0015318.1 mouse_genomes_project 4 136090412 136092051 + Gm12945 processed_transcript processed_transcript MGP_CBAJ_T0099313.1 MGP_CBAJ_G0037568.1 mouse_genomes_project 4 147512456 147512559 + Gm26001 snRNA snRNA MGP_CBAJ_T0068714.1 MGP_CBAJ_G0028742.1 mouse_genomes_project 4 157136214 157142623 - MGP_CBAJ_P0068714 Oog3 protein_coding protein_coding MGP_CBAJ_T0065884.1 MGP_CBAJ_G0028100.1 mouse_genomes_project 4 94973443 94974004 + MGP_CBAJ_P0065884 Ifna4 protein_coding protein_coding MGP_CBAJ_T0014215.1 MGP_CBAJ_G0012327.1 mouse_genomes_project 4 8164807 8165293 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0064557.1 MGP_CBAJ_G0027793.1 mouse_genomes_project 4 33095272 33308535 + MGP_CBAJ_P0064557 Rngtt protein_coding protein_coding MGP_CBAJ_T0064558.1 MGP_CBAJ_G0027793.1 mouse_genomes_project 4 33095289 33306835 + MGP_CBAJ_P0064558 Rngtt protein_coding protein_coding MGP_CBAJ_T0064559.1 MGP_CBAJ_G0027793.1 mouse_genomes_project 4 33107083 33110886 + Rngtt protein_coding processed_transcript MGP_CBAJ_T0064560.1 MGP_CBAJ_G0027793.1 mouse_genomes_project 4 33109745 33123957 + Rngtt protein_coding processed_transcript MGP_CBAJ_T0064561.1 MGP_CBAJ_G0027793.1 mouse_genomes_project 4 33115818 33147013 + Rngtt protein_coding processed_transcript MGP_CBAJ_T0014249.1 MGP_CBAJ_G0012361.1 mouse_genomes_project 4 17412187 17413035 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068637.1 MGP_CBAJ_G0028713.1 mouse_genomes_project 4 154127856 154134918 - MGP_CBAJ_P0068637 Tmem82 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068638.1 MGP_CBAJ_G0028713.1 mouse_genomes_project 4 154128716 154132691 - MGP_CBAJ_P0068638 Tmem82 protein_coding protein_coding MGP_CBAJ_T0068639.1 MGP_CBAJ_G0028713.1 mouse_genomes_project 4 154128720 154132434 - Tmem82 protein_coding retained_intron MGP_CBAJ_T0010535.1 MGP_CBAJ_G0008673.1 mouse_genomes_project 4 171356050 171356107 - Mir7658 miRNA miRNA MGP_CBAJ_T0014452.1 MGP_CBAJ_G0012564.1 mouse_genomes_project 4 98813601 98813899 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0066467.1 MGP_CBAJ_G0028228.1 mouse_genomes_project 4 117263703 117264925 - MGP_CBAJ_P0066467 A730015C16Rik protein_coding protein_coding MGP_CBAJ_T0007875.1 MGP_CBAJ_G0006423.1 mouse_genomes_project 4 141903022 141921279 + Gm831 lincRNA lincRNA MGP_CBAJ_T0007832.1 MGP_CBAJ_G0006395.1 mouse_genomes_project 4 128074454 128088235 - Gm12865 lincRNA lincRNA MGP_CBAJ_T0064154.1 MGP_CBAJ_G0027697.1 mouse_genomes_project 4 39832 80803 + MGP_CBAJ_P0064154 Tgs1 protein_coding protein_coding MGP_CBAJ_T0064155.1 MGP_CBAJ_G0027697.1 mouse_genomes_project 4 39907 48886 + Tgs1 protein_coding retained_intron MGP_CBAJ_T0064156.1 MGP_CBAJ_G0027697.1 mouse_genomes_project 4 58548 63652 + Tgs1 protein_coding processed_transcript MGP_CBAJ_T0064157.1 MGP_CBAJ_G0027697.1 mouse_genomes_project 4 63599 67550 + Tgs1 protein_coding retained_intron MGP_CBAJ_T0064158.1 MGP_CBAJ_G0027697.1 mouse_genomes_project 4 70636 79468 + Tgs1 protein_coding retained_intron MGP_CBAJ_T0068320.1 MGP_CBAJ_G0028643.1 mouse_genomes_project 4 149093898 149106732 - MGP_CBAJ_P0068320 Cela3b protein_coding protein_coding MGP_CBAJ_T0068321.1 MGP_CBAJ_G0028643.1 mouse_genomes_project 4 149093907 149095689 - Cela3b protein_coding processed_transcript MGP_CBAJ_T0100543.1 MGP_CBAJ_G0038798.1 mouse_genomes_project 4 59631258 59631390 - Gm25053 snoRNA snoRNA MGP_CBAJ_T0014432.1 MGP_CBAJ_G0012544.1 mouse_genomes_project 4 90016351 90016658 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067478.1 MGP_CBAJ_G0028460.1 mouse_genomes_project 4 137283842 137286840 - MGP_CBAJ_P0067478 Gjb4 protein_coding protein_coding MGP_CBAJ_T0067479.1 MGP_CBAJ_G0028460.1 mouse_genomes_project 4 137283842 137286840 - MGP_CBAJ_P0067479 Gjb4 protein_coding protein_coding MGP_CBAJ_T0014426.1 MGP_CBAJ_G0012538.1 mouse_genomes_project 4 86813896 86819518 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007818.1 MGP_CBAJ_G0006385.1 mouse_genomes_project 4 115909428 115988953 + 1700047F07Rik lincRNA lincRNA MGP_CBAJ_T0007819.1 MGP_CBAJ_G0006385.1 mouse_genomes_project 4 115909460 115930905 + 1700047F07Rik lincRNA lincRNA MGP_CBAJ_T0007820.1 MGP_CBAJ_G0006385.1 mouse_genomes_project 4 115929351 115939571 + 1700047F07Rik lincRNA lincRNA MGP_CBAJ_T0007821.1 MGP_CBAJ_G0006385.1 mouse_genomes_project 4 115929374 115930962 + 1700047F07Rik lincRNA lincRNA MGP_CBAJ_T0064739.1 MGP_CBAJ_G0027836.1 mouse_genomes_project 4 42457223 42459414 - MGP_CBAJ_P0064739 Enho protein_coding protein_coding MGP_CBAJ_T0014436.1 MGP_CBAJ_G0012548.1 mouse_genomes_project 4 92253808 92254137 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0066089.1 MGP_CBAJ_G0028152.1 mouse_genomes_project 4 108448845 108449244 - MGP_CBAJ_P0066089 Gm10577 protein_coding protein_coding MGP_CBAJ_T0069458.1 MGP_CBAJ_G0028901.1 mouse_genomes_project 4 170954637 170956482 - Pusl1 protein_coding processed_transcript MGP_CBAJ_T0069460.1 MGP_CBAJ_G0028901.1 mouse_genomes_project 4 170955620 170958744 - MGP_CBAJ_P0069460 Pusl1 protein_coding protein_coding MGP_CBAJ_T0069461.1 MGP_CBAJ_G0028901.1 mouse_genomes_project 4 170957348 170958172 - Pusl1 protein_coding retained_intron MGP_CBAJ_T0069462.1 MGP_CBAJ_G0028901.1 mouse_genomes_project 4 170957459 170958689 - Pusl1 protein_coding retained_intron MGP_CBAJ_T0069463.1 MGP_CBAJ_G0028901.1 mouse_genomes_project 4 170957743 170958718 - Pusl1 protein_coding retained_intron MGP_CBAJ_T0069464.1 MGP_CBAJ_G0028901.1 mouse_genomes_project 4 170957804 170958732 - Pusl1 protein_coding processed_transcript MGP_CBAJ_T0069465.1 MGP_CBAJ_G0028901.1 mouse_genomes_project 4 170958014 170958691 - Pusl1 protein_coding retained_intron MGP_CBAJ_T0004460.1 MGP_CBAJ_G0003872.1 mouse_genomes_project 4 141149471 141150132 - Gm12970 antisense antisense MGP_CBAJ_T0007924.1 MGP_CBAJ_G0006461.1 mouse_genomes_project 4 164289133 164294532 - Gm13093 lincRNA lincRNA MGP_CBAJ_T0017785.1 MGP_CBAJ_G0015284.1 mouse_genomes_project 4 35211470 35222371 + Gm12367 processed_transcript processed_transcript MGP_CBAJ_T0017786.1 MGP_CBAJ_G0015284.1 mouse_genomes_project 4 35211488 35222469 + Gm12367 processed_transcript processed_transcript MGP_CBAJ_T0017787.1 MGP_CBAJ_G0015284.1 mouse_genomes_project 4 35211505 35253272 + Gm12367 processed_transcript processed_transcript MGP_CBAJ_T0069070.1 MGP_CBAJ_G0028832.1 mouse_genomes_project 4 166517265 166525153 - MGP_CBAJ_P0069070 Zbtb48 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069071.1 MGP_CBAJ_G0028832.1 mouse_genomes_project 4 166517265 166525153 - MGP_CBAJ_P0069071 Zbtb48 protein_coding protein_coding MGP_CBAJ_T0069072.1 MGP_CBAJ_G0028832.1 mouse_genomes_project 4 166517267 166525163 - Zbtb48 protein_coding retained_intron MGP_CBAJ_T0069073.1 MGP_CBAJ_G0028832.1 mouse_genomes_project 4 166517291 166518108 - Zbtb48 protein_coding processed_transcript MGP_CBAJ_T0069074.1 MGP_CBAJ_G0028832.1 mouse_genomes_project 4 166518600 166519598 - Zbtb48 protein_coding processed_transcript MGP_CBAJ_T0069075.1 MGP_CBAJ_G0028832.1 mouse_genomes_project 4 166519083 166523936 - MGP_CBAJ_P0069075 Zbtb48 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069076.1 MGP_CBAJ_G0028832.1 mouse_genomes_project 4 166519977 166523539 - Zbtb48 protein_coding retained_intron MGP_CBAJ_T0069077.1 MGP_CBAJ_G0028832.1 mouse_genomes_project 4 166523969 166525129 - MGP_CBAJ_P0069077 Zbtb48 protein_coding protein_coding MGP_CBAJ_T0068142.1 MGP_CBAJ_G0028598.1 mouse_genomes_project 4 146004384 146031194 - MGP_CBAJ_P0068142 Tmem50a protein_coding protein_coding MGP_CBAJ_T0068143.1 MGP_CBAJ_G0028598.1 mouse_genomes_project 4 146004926 146031185 - MGP_CBAJ_P0068143 Tmem50a protein_coding protein_coding MGP_CBAJ_T0014351.1 MGP_CBAJ_G0012463.1 mouse_genomes_project 4 54309060 54309360 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014528.1 MGP_CBAJ_G0012640.1 mouse_genomes_project 4 126699826 126700149 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100583.1 MGP_CBAJ_G0038838.1 mouse_genomes_project 4 141207512 141207642 - Gm22660 snoRNA snoRNA MGP_CBAJ_T0064430.1 MGP_CBAJ_G0027765.1 mouse_genomes_project 4 20200639 20231804 + MGP_CBAJ_P0064430 Pnisr protein_coding protein_coding MGP_CBAJ_T0064431.1 MGP_CBAJ_G0027765.1 mouse_genomes_project 4 20201104 20229084 + MGP_CBAJ_P0064431 Pnisr protein_coding nonsense_mediated_decay MGP_CBAJ_T0064432.1 MGP_CBAJ_G0027765.1 mouse_genomes_project 4 20201111 20231796 + MGP_CBAJ_P0064432 Pnisr protein_coding protein_coding MGP_CBAJ_T0064433.1 MGP_CBAJ_G0027765.1 mouse_genomes_project 4 20201114 20213525 + Pnisr protein_coding processed_transcript MGP_CBAJ_T0064434.1 MGP_CBAJ_G0027765.1 mouse_genomes_project 4 20201114 20226671 + MGP_CBAJ_P0064434 Pnisr protein_coding protein_coding MGP_CBAJ_T0064435.1 MGP_CBAJ_G0027765.1 mouse_genomes_project 4 20201120 20211047 + Pnisr protein_coding processed_transcript MGP_CBAJ_T0064436.1 MGP_CBAJ_G0027765.1 mouse_genomes_project 4 20201129 20207981 + Pnisr protein_coding processed_transcript MGP_CBAJ_T0064437.1 MGP_CBAJ_G0027765.1 mouse_genomes_project 4 20201137 20215180 + Pnisr protein_coding processed_transcript MGP_CBAJ_T0064438.1 MGP_CBAJ_G0027765.1 mouse_genomes_project 4 20207124 20212259 + Pnisr protein_coding processed_transcript MGP_CBAJ_T0064439.1 MGP_CBAJ_G0027765.1 mouse_genomes_project 4 20211782 20215100 + Pnisr protein_coding processed_transcript MGP_CBAJ_T0064440.1 MGP_CBAJ_G0027765.1 mouse_genomes_project 4 20212055 20213943 + Pnisr protein_coding processed_transcript MGP_CBAJ_T0064441.1 MGP_CBAJ_G0027765.1 mouse_genomes_project 4 20226362 20229193 + Pnisr protein_coding processed_transcript MGP_CBAJ_T0064442.1 MGP_CBAJ_G0027765.1 mouse_genomes_project 4 20229532 20230585 + Pnisr protein_coding processed_transcript MGP_CBAJ_T0064264.1 MGP_CBAJ_G0027719.1 mouse_genomes_project 4 8071241 8103591 + MGP_CBAJ_P0064264 2610301B20Rik protein_coding protein_coding MGP_CBAJ_T0064265.1 MGP_CBAJ_G0027719.1 mouse_genomes_project 4 8071268 8097638 + 2610301B20Rik protein_coding processed_transcript MGP_CBAJ_T0064266.1 MGP_CBAJ_G0027719.1 mouse_genomes_project 4 8071308 8102245 + 2610301B20Rik protein_coding processed_transcript MGP_CBAJ_T0064267.1 MGP_CBAJ_G0027719.1 mouse_genomes_project 4 8071311 8103595 + MGP_CBAJ_P0064267 2610301B20Rik protein_coding protein_coding MGP_CBAJ_T0064268.1 MGP_CBAJ_G0027719.1 mouse_genomes_project 4 8076171 8093483 + 2610301B20Rik protein_coding processed_transcript MGP_CBAJ_T0065664.1 MGP_CBAJ_G0028054.1 mouse_genomes_project 4 78699737 78878576 + MGP_CBAJ_P0065664 Kdm4c protein_coding protein_coding MGP_CBAJ_T0065665.1 MGP_CBAJ_G0028054.1 mouse_genomes_project 4 78709736 78878576 + MGP_CBAJ_P0065665 Kdm4c protein_coding protein_coding MGP_CBAJ_T0065666.1 MGP_CBAJ_G0028054.1 mouse_genomes_project 4 78720641 78797237 + Kdm4c protein_coding processed_transcript MGP_CBAJ_T0065667.1 MGP_CBAJ_G0028054.1 mouse_genomes_project 4 78720641 78799459 + MGP_CBAJ_P0065667 Kdm4c protein_coding protein_coding MGP_CBAJ_T0065668.1 MGP_CBAJ_G0028054.1 mouse_genomes_project 4 78720642 78731463 + Kdm4c protein_coding processed_transcript MGP_CBAJ_T0065669.1 MGP_CBAJ_G0028054.1 mouse_genomes_project 4 78720642 78727486 + Kdm4c protein_coding processed_transcript MGP_CBAJ_T0065044.1 MGP_CBAJ_G0027894.1 mouse_genomes_project 4 45046875 45073053 + MGP_CBAJ_P0065044 Glipr2 protein_coding protein_coding MGP_CBAJ_T0065045.1 MGP_CBAJ_G0027894.1 mouse_genomes_project 4 45047166 45073053 + MGP_CBAJ_P0065045 Glipr2 protein_coding protein_coding MGP_CBAJ_T0067848.1 MGP_CBAJ_G0028531.1 mouse_genomes_project 4 142899469 142913308 - MGP_CBAJ_P0067848 Rcc1 protein_coding protein_coding MGP_CBAJ_T0067849.1 MGP_CBAJ_G0028531.1 mouse_genomes_project 4 142899473 142913266 - MGP_CBAJ_P0067849 Rcc1 protein_coding protein_coding MGP_CBAJ_T0067850.1 MGP_CBAJ_G0028531.1 mouse_genomes_project 4 142899473 142922226 - MGP_CBAJ_P0067850 Rcc1 protein_coding protein_coding MGP_CBAJ_T0067851.1 MGP_CBAJ_G0028531.1 mouse_genomes_project 4 142905216 142907493 - Rcc1 protein_coding processed_transcript MGP_CBAJ_T0067852.1 MGP_CBAJ_G0028531.1 mouse_genomes_project 4 142905383 142924193 - MGP_CBAJ_P0067852 Rcc1 protein_coding protein_coding MGP_CBAJ_T0067853.1 MGP_CBAJ_G0028531.1 mouse_genomes_project 4 142906275 142913262 - Rcc1 protein_coding retained_intron MGP_CBAJ_T0067854.1 MGP_CBAJ_G0028531.1 mouse_genomes_project 4 142906521 142912918 - Rcc1 protein_coding retained_intron MGP_CBAJ_T0067855.1 MGP_CBAJ_G0028531.1 mouse_genomes_project 4 142907051 142913253 - Rcc1 protein_coding retained_intron MGP_CBAJ_T0067221.1 MGP_CBAJ_G0028399.1 mouse_genomes_project 4 132725692 132740563 + MGP_CBAJ_P0067221 Nt5c1a protein_coding protein_coding MGP_CBAJ_T0100519.1 MGP_CBAJ_G0038774.1 mouse_genomes_project 4 24239418 24239543 - Gm25975 snoRNA snoRNA MGP_CBAJ_T0064645.1 MGP_CBAJ_G0027812.1 mouse_genomes_project 4 40887853 40898103 - MGP_CBAJ_P0064645 Topors protein_coding protein_coding MGP_CBAJ_T0017783.1 MGP_CBAJ_G0015283.1 mouse_genomes_project 4 34859933 34866146 - Platr9 processed_transcript processed_transcript MGP_CBAJ_T0017784.1 MGP_CBAJ_G0015283.1 mouse_genomes_project 4 34863599 34866146 - Platr9 processed_transcript processed_transcript MGP_CBAJ_T0066160.1 MGP_CBAJ_G0028168.1 mouse_genomes_project 4 110725465 110734487 - MGP_CBAJ_P0066160 Insl5 protein_coding protein_coding MGP_CBAJ_T0066161.1 MGP_CBAJ_G0028168.1 mouse_genomes_project 4 110725707 110734592 - MGP_CBAJ_P0066161 Insl5 protein_coding protein_coding MGP_CBAJ_T0014543.1 MGP_CBAJ_G0012655.1 mouse_genomes_project 4 130494123 130494546 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099311.1 MGP_CBAJ_G0037566.1 mouse_genomes_project 4 144786425 144786525 - Gm22523 snRNA snRNA MGP_CBAJ_T0068719.1 MGP_CBAJ_G0028745.1 mouse_genomes_project 4 157309280 157314252 - MGP_CBAJ_P0068719 protein_coding protein_coding MGP_CBAJ_T0014484.1 MGP_CBAJ_G0012596.1 mouse_genomes_project 4 111761854 111762095 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065810.1 MGP_CBAJ_G0028075.1 mouse_genomes_project 4 92256481 92359593 - Saxo1 protein_coding processed_transcript MGP_CBAJ_T0065811.1 MGP_CBAJ_G0028075.1 mouse_genomes_project 4 92256481 92379546 - MGP_CBAJ_P0065811 Saxo1 protein_coding protein_coding MGP_CBAJ_T0065812.1 MGP_CBAJ_G0028075.1 mouse_genomes_project 4 92291428 92379238 - Saxo1 protein_coding processed_transcript MGP_CBAJ_T0065813.1 MGP_CBAJ_G0028075.1 mouse_genomes_project 4 92294016 92379571 - Saxo1 protein_coding processed_transcript MGP_CBAJ_T0066209.1 MGP_CBAJ_G0028177.1 mouse_genomes_project 4 112758512 112763158 + MGP_CBAJ_P0066209 Gm17662 protein_coding protein_coding MGP_CBAJ_T0014302.1 MGP_CBAJ_G0012414.1 mouse_genomes_project 4 33254687 33255086 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007725.1 MGP_CBAJ_G0006308.1 mouse_genomes_project 4 39021849 39334813 - lincRNA lincRNA MGP_CBAJ_T0065979.1 MGP_CBAJ_G0028125.1 mouse_genomes_project 4 103107973 103172305 - MGP_CBAJ_P0065979 Cyp2j11 protein_coding protein_coding MGP_CBAJ_T0064804.1 MGP_CBAJ_G0027851.1 mouse_genomes_project 4 42607923 42608956 - MGP_CBAJ_P0064804 protein_coding protein_coding MGP_CBAJ_T0101899.1 MGP_CBAJ_G0039930.1 mouse_genomes_project 4 103044054 103077507 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0014395.1 MGP_CBAJ_G0012507.1 mouse_genomes_project 4 75398753 75399190 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0069276.1 MGP_CBAJ_G0028868.1 mouse_genomes_project 4 169885178 169901884 + MGP_CBAJ_P0069276 Pank4 protein_coding protein_coding MGP_CBAJ_T0069277.1 MGP_CBAJ_G0028868.1 mouse_genomes_project 4 169885188 169901951 + MGP_CBAJ_P0069277 Pank4 protein_coding protein_coding MGP_CBAJ_T0069278.1 MGP_CBAJ_G0028868.1 mouse_genomes_project 4 169891032 169901902 + MGP_CBAJ_P0069278 Pank4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069279.1 MGP_CBAJ_G0028868.1 mouse_genomes_project 4 169895566 169901951 + Pank4 protein_coding retained_intron MGP_CBAJ_T0069280.1 MGP_CBAJ_G0028868.1 mouse_genomes_project 4 169897284 169900168 + Pank4 protein_coding retained_intron MGP_CBAJ_T0069281.1 MGP_CBAJ_G0028868.1 mouse_genomes_project 4 169897292 169900238 + Pank4 protein_coding retained_intron MGP_CBAJ_T0069282.1 MGP_CBAJ_G0028868.1 mouse_genomes_project 4 169897591 169901947 + Pank4 protein_coding retained_intron MGP_CBAJ_T0010480.1 MGP_CBAJ_G0008618.1 mouse_genomes_project 4 101347665 101347746 + Mir872 miRNA miRNA MGP_CBAJ_T0004364.1 MGP_CBAJ_G0003801.1 mouse_genomes_project 4 46196413 46204129 - Gm12679 antisense antisense MGP_CBAJ_T0066061.1 MGP_CBAJ_G0028144.1 mouse_genomes_project 4 106901268 106903592 + MGP_CBAJ_P0066061 Foxd3 protein_coding protein_coding MGP_CBAJ_T0010474.1 MGP_CBAJ_G0008612.1 mouse_genomes_project 4 86299523 86299619 + Gm27452 miRNA miRNA MGP_CBAJ_T0010490.1 MGP_CBAJ_G0008628.1 mouse_genomes_project 4 128244288 128244354 + Mir1957a miRNA miRNA MGP_CBAJ_T0067912.1 MGP_CBAJ_G0028546.1 mouse_genomes_project 4 143653530 143666328 + Fgr protein_coding processed_transcript MGP_CBAJ_T0067913.1 MGP_CBAJ_G0028546.1 mouse_genomes_project 4 143653537 143689347 + MGP_CBAJ_P0067913 Fgr protein_coding protein_coding MGP_CBAJ_T0067914.1 MGP_CBAJ_G0028546.1 mouse_genomes_project 4 143656541 143688204 + Fgr protein_coding processed_transcript MGP_CBAJ_T0065643.1 MGP_CBAJ_G0028048.1 mouse_genomes_project 4 75921564 75923886 - MGP_CBAJ_P0065643 Gm11232 protein_coding protein_coding MGP_CBAJ_T0004449.1 MGP_CBAJ_G0003864.1 mouse_genomes_project 4 134672942 134705439 - Gm12930 antisense antisense MGP_CBAJ_T0068263.1 MGP_CBAJ_G0028624.1 mouse_genomes_project 4 147590051 147640405 + MGP_CBAJ_P0068263 Asap3 protein_coding protein_coding MGP_CBAJ_T0004409.1 MGP_CBAJ_G0003834.1 mouse_genomes_project 4 115178624 115183152 - Gm12786 antisense antisense MGP_CBAJ_T0064480.1 MGP_CBAJ_G0027775.1 mouse_genomes_project 4 23939783 23978193 - Ufl1 protein_coding retained_intron MGP_CBAJ_T0064481.1 MGP_CBAJ_G0027775.1 mouse_genomes_project 4 23941653 23978185 - MGP_CBAJ_P0064481 Ufl1 protein_coding protein_coding MGP_CBAJ_T0064482.1 MGP_CBAJ_G0027775.1 mouse_genomes_project 4 23962129 23978181 - Ufl1 protein_coding processed_transcript MGP_CBAJ_T0017829.1 MGP_CBAJ_G0015315.1 mouse_genomes_project 4 132435595 132437758 + 4933421A08Rik processed_transcript processed_transcript MGP_CBAJ_T0064635.1 MGP_CBAJ_G0027811.1 mouse_genomes_project 4 40828569 40833325 - Ddx58 protein_coding processed_transcript MGP_CBAJ_T0064636.1 MGP_CBAJ_G0027811.1 mouse_genomes_project 4 40828573 40845307 - Ddx58 protein_coding processed_transcript MGP_CBAJ_T0064637.1 MGP_CBAJ_G0027811.1 mouse_genomes_project 4 40829645 40864941 - MGP_CBAJ_P0064637 Ddx58 protein_coding protein_coding MGP_CBAJ_T0064638.1 MGP_CBAJ_G0027811.1 mouse_genomes_project 4 40832980 40833577 - Ddx58 protein_coding processed_transcript MGP_CBAJ_T0064639.1 MGP_CBAJ_G0027811.1 mouse_genomes_project 4 40833552 40838783 - Ddx58 protein_coding processed_transcript MGP_CBAJ_T0064640.1 MGP_CBAJ_G0027811.1 mouse_genomes_project 4 40833634 40864813 - MGP_CBAJ_P0064640 Ddx58 protein_coding protein_coding MGP_CBAJ_T0064641.1 MGP_CBAJ_G0027811.1 mouse_genomes_project 4 40848137 40864868 - Ddx58 protein_coding processed_transcript MGP_CBAJ_T0064642.1 MGP_CBAJ_G0027811.1 mouse_genomes_project 4 40848582 40864835 - Ddx58 protein_coding processed_transcript MGP_CBAJ_T0064643.1 MGP_CBAJ_G0027811.1 mouse_genomes_project 4 40851262 40853034 - Ddx58 protein_coding processed_transcript MGP_CBAJ_T0064644.1 MGP_CBAJ_G0027811.1 mouse_genomes_project 4 40851736 40864938 - Ddx58 protein_coding processed_transcript MGP_CBAJ_T0066839.1 MGP_CBAJ_G0028304.1 mouse_genomes_project 4 125864683 125927087 + MGP_CBAJ_P0066839 Eif2b3 protein_coding protein_coding MGP_CBAJ_T0066840.1 MGP_CBAJ_G0028304.1 mouse_genomes_project 4 125864688 125940461 + MGP_CBAJ_P0066840 Eif2b3 protein_coding protein_coding MGP_CBAJ_T0066841.1 MGP_CBAJ_G0028304.1 mouse_genomes_project 4 125893788 125913181 + Eif2b3 protein_coding processed_transcript MGP_CBAJ_T0066842.1 MGP_CBAJ_G0028304.1 mouse_genomes_project 4 125920308 125928129 + Eif2b3 protein_coding processed_transcript MGP_CBAJ_T0066843.1 MGP_CBAJ_G0028304.1 mouse_genomes_project 4 125921300 125940912 + Eif2b3 protein_coding processed_transcript MGP_CBAJ_T0066844.1 MGP_CBAJ_G0028304.1 mouse_genomes_project 4 125935277 125940454 + Eif2b3 protein_coding processed_transcript MGP_CBAJ_T0067333.1 MGP_CBAJ_G0028427.1 mouse_genomes_project 4 134847632 134857049 - MGP_CBAJ_P0067333 Zc3h12a protein_coding protein_coding MGP_CBAJ_T0067334.1 MGP_CBAJ_G0028427.1 mouse_genomes_project 4 134849302 134851729 - Zc3h12a protein_coding retained_intron MGP_CBAJ_T0068272.1 MGP_CBAJ_G0028627.1 mouse_genomes_project 4 147717000 147783201 + MGP_CBAJ_P0068272 Hnrnpr protein_coding protein_coding MGP_CBAJ_T0068273.1 MGP_CBAJ_G0028627.1 mouse_genomes_project 4 147717060 147747074 + MGP_CBAJ_P0068273 Hnrnpr protein_coding nonsense_mediated_decay MGP_CBAJ_T0068274.1 MGP_CBAJ_G0028627.1 mouse_genomes_project 4 147717567 147738532 + MGP_CBAJ_P0068274 Hnrnpr protein_coding protein_coding MGP_CBAJ_T0068275.1 MGP_CBAJ_G0028627.1 mouse_genomes_project 4 147717623 147747102 + MGP_CBAJ_P0068275 Hnrnpr protein_coding protein_coding MGP_CBAJ_T0068276.1 MGP_CBAJ_G0028627.1 mouse_genomes_project 4 147717717 147722457 + MGP_CBAJ_P0068276 Hnrnpr protein_coding protein_coding MGP_CBAJ_T0068277.1 MGP_CBAJ_G0028627.1 mouse_genomes_project 4 147753471 147756671 + Hnrnpr protein_coding retained_intron MGP_CBAJ_T0068278.1 MGP_CBAJ_G0028627.1 mouse_genomes_project 4 147779537 147781803 + Hnrnpr protein_coding processed_transcript MGP_CBAJ_T0007829.1 MGP_CBAJ_G0006392.1 mouse_genomes_project 4 124478300 124482108 + Gm12847 lincRNA lincRNA MGP_CBAJ_T0014270.1 MGP_CBAJ_G0012382.1 mouse_genomes_project 4 24272279 24272841 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014480.1 MGP_CBAJ_G0012592.1 mouse_genomes_project 4 109399604 109400307 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014380.1 MGP_CBAJ_G0012492.1 mouse_genomes_project 4 66294802 66295057 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097816.1 MGP_CBAJ_G0036089.1 mouse_genomes_project 4 133520170 133521670 - pseudogene pseudogene MGP_CBAJ_T0017777.1 MGP_CBAJ_G0015279.1 mouse_genomes_project 4 23669001 23674828 - C230012O17Rik processed_transcript processed_transcript MGP_CBAJ_T0017778.1 MGP_CBAJ_G0015279.1 mouse_genomes_project 4 23670541 23675295 - C230012O17Rik processed_transcript processed_transcript MGP_CBAJ_T0017779.1 MGP_CBAJ_G0015279.1 mouse_genomes_project 4 23674583 23675661 - C230012O17Rik processed_transcript processed_transcript MGP_CBAJ_T0067187.1 MGP_CBAJ_G0028391.1 mouse_genomes_project 4 132299038 132321878 + MGP_CBAJ_P0067187 Ppt1 protein_coding protein_coding MGP_CBAJ_T0067188.1 MGP_CBAJ_G0028391.1 mouse_genomes_project 4 132299042 132311779 + MGP_CBAJ_P0067188 Ppt1 protein_coding protein_coding MGP_CBAJ_T0067189.1 MGP_CBAJ_G0028391.1 mouse_genomes_project 4 132299046 132321975 + MGP_CBAJ_P0067189 Ppt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067190.1 MGP_CBAJ_G0028391.1 mouse_genomes_project 4 132299050 132313062 + MGP_CBAJ_P0067190 Ppt1 protein_coding protein_coding MGP_CBAJ_T0007909.1 MGP_CBAJ_G0006446.1 mouse_genomes_project 4 152570902 152576359 + Gm13017 lincRNA lincRNA MGP_CBAJ_T0007713.1 MGP_CBAJ_G0006296.1 mouse_genomes_project 4 21417747 21428016 - 1700025O08Rik lincRNA lincRNA MGP_CBAJ_T0067325.1 MGP_CBAJ_G0028426.1 mouse_genomes_project 4 134813619 134842450 + MGP_CBAJ_P0067325 Meaf6 protein_coding protein_coding MGP_CBAJ_T0067326.1 MGP_CBAJ_G0028426.1 mouse_genomes_project 4 134813636 134839115 + MGP_CBAJ_P0067326 Meaf6 protein_coding protein_coding MGP_CBAJ_T0067327.1 MGP_CBAJ_G0028426.1 mouse_genomes_project 4 134813649 134838940 + MGP_CBAJ_P0067327 Meaf6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067328.1 MGP_CBAJ_G0028426.1 mouse_genomes_project 4 134813650 134818646 + Meaf6 protein_coding processed_transcript MGP_CBAJ_T0067329.1 MGP_CBAJ_G0028426.1 mouse_genomes_project 4 134813746 134838678 + MGP_CBAJ_P0067329 Meaf6 protein_coding protein_coding MGP_CBAJ_T0067330.1 MGP_CBAJ_G0028426.1 mouse_genomes_project 4 134814673 134838683 + MGP_CBAJ_P0067330 Meaf6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067331.1 MGP_CBAJ_G0028426.1 mouse_genomes_project 4 134818383 134832200 + Meaf6 protein_coding processed_transcript MGP_CBAJ_T0067332.1 MGP_CBAJ_G0028426.1 mouse_genomes_project 4 134837209 134838654 + Meaf6 protein_coding retained_intron MGP_CBAJ_T0065252.1 MGP_CBAJ_G0027935.1 mouse_genomes_project 4 49057436 49066061 + MGP_CBAJ_P0065252 protein_coding protein_coding MGP_CBAJ_T0065253.1 MGP_CBAJ_G0027935.1 mouse_genomes_project 4 49057542 49065947 + MGP_CBAJ_P0065253 protein_coding protein_coding MGP_CBAJ_T0065254.1 MGP_CBAJ_G0027935.1 mouse_genomes_project 4 49057586 49065913 + MGP_CBAJ_P0065254 protein_coding protein_coding MGP_CBAJ_T0065255.1 MGP_CBAJ_G0027935.1 mouse_genomes_project 4 49057726 49063610 + protein_coding retained_intron MGP_CBAJ_T0014391.1 MGP_CBAJ_G0012503.1 mouse_genomes_project 4 73819391 73820129 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014563.1 MGP_CBAJ_G0012675.1 mouse_genomes_project 4 136618112 136619075 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099236.1 MGP_CBAJ_G0037491.1 mouse_genomes_project 4 6233685 6233791 + Gm23423 snRNA snRNA MGP_CBAJ_T0007703.1 MGP_CBAJ_G0006287.1 mouse_genomes_project 4 9364633 9374203 - Gm11840 lincRNA lincRNA MGP_CBAJ_T0068771.1 MGP_CBAJ_G0028773.1 mouse_genomes_project 4 161593448 161627604 - MGP_CBAJ_P0068771 Mfn2 protein_coding protein_coding MGP_CBAJ_T0068772.1 MGP_CBAJ_G0028773.1 mouse_genomes_project 4 161593448 161627621 - MGP_CBAJ_P0068772 Mfn2 protein_coding protein_coding MGP_CBAJ_T0068773.1 MGP_CBAJ_G0028773.1 mouse_genomes_project 4 161593865 161627615 - MGP_CBAJ_P0068773 Mfn2 protein_coding protein_coding MGP_CBAJ_T0068774.1 MGP_CBAJ_G0028773.1 mouse_genomes_project 4 161604164 161627615 - MGP_CBAJ_P0068774 Mfn2 protein_coding protein_coding MGP_CBAJ_T0068775.1 MGP_CBAJ_G0028773.1 mouse_genomes_project 4 161608377 161610243 - Mfn2 protein_coding processed_transcript MGP_CBAJ_T0068776.1 MGP_CBAJ_G0028773.1 mouse_genomes_project 4 161610053 161626314 - MGP_CBAJ_P0068776 Mfn2 protein_coding protein_coding MGP_CBAJ_T0068777.1 MGP_CBAJ_G0028773.1 mouse_genomes_project 4 161617561 161627575 - MGP_CBAJ_P0068777 Mfn2 protein_coding protein_coding MGP_CBAJ_T0017860.1 MGP_CBAJ_G0015329.1 mouse_genomes_project 4 170642994 170661787 - Gm16023 processed_transcript processed_transcript MGP_CBAJ_T0017861.1 MGP_CBAJ_G0015329.1 mouse_genomes_project 4 170653209 170661512 - Gm16023 processed_transcript processed_transcript MGP_CBAJ_T0014257.1 MGP_CBAJ_G0012369.1 mouse_genomes_project 4 20692031 20692537 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004372.1 MGP_CBAJ_G0003807.1 mouse_genomes_project 4 55605504 55610432 + 4930522O17Rik antisense antisense MGP_CBAJ_T0101912.1 MGP_CBAJ_G0039943.1 mouse_genomes_project 4 127902688 127903642 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0068536.1 MGP_CBAJ_G0028691.1 mouse_genomes_project 4 153064610 153098581 - MGP_CBAJ_P0068536 Padi3 protein_coding protein_coding MGP_CBAJ_T0068537.1 MGP_CBAJ_G0028691.1 mouse_genomes_project 4 153064614 153083299 - MGP_CBAJ_P0068537 Padi3 protein_coding protein_coding MGP_CBAJ_T0100567.1 MGP_CBAJ_G0038822.1 mouse_genomes_project 4 118044846 118044977 + Gm22497 snoRNA snoRNA MGP_CBAJ_T0014393.1 MGP_CBAJ_G0012505.1 mouse_genomes_project 4 74046555 74047586 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004456.1 MGP_CBAJ_G0003870.1 mouse_genomes_project 4 139731203 139751141 - Gm12979 antisense antisense MGP_CBAJ_T0064817.1 MGP_CBAJ_G0027853.1 mouse_genomes_project 4 42627841 42628741 - MGP_CBAJ_P0064817 Ccl19 protein_coding protein_coding MGP_CBAJ_T0014518.1 MGP_CBAJ_G0012630.1 mouse_genomes_project 4 124280474 124281566 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010445.1 MGP_CBAJ_G0008583.1 mouse_genomes_project 4 8070806 8070913 + n-TSaga9 miRNA miRNA MGP_CBAJ_T0066737.1 MGP_CBAJ_G0028284.1 mouse_genomes_project 4 124865086 124870818 - MGP_CBAJ_P0066737 Tspan1 protein_coding protein_coding MGP_CBAJ_T0066738.1 MGP_CBAJ_G0028284.1 mouse_genomes_project 4 124866525 124870819 - MGP_CBAJ_P0066738 Tspan1 protein_coding protein_coding MGP_CBAJ_T0066739.1 MGP_CBAJ_G0028284.1 mouse_genomes_project 4 124866549 124868051 - Tspan1 protein_coding retained_intron MGP_CBAJ_T0067023.1 MGP_CBAJ_G0028342.1 mouse_genomes_project 4 127776479 127777427 + MGP_CBAJ_P0067023 Olfr1339 protein_coding protein_coding MGP_CBAJ_T0068545.1 MGP_CBAJ_G0028695.1 mouse_genomes_project 4 153319330 153341271 + MGP_CBAJ_P0068545 Atp13a2 protein_coding protein_coding MGP_CBAJ_T0068546.1 MGP_CBAJ_G0028695.1 mouse_genomes_project 4 153319357 153343514 + Atp13a2 protein_coding retained_intron MGP_CBAJ_T0068547.1 MGP_CBAJ_G0028695.1 mouse_genomes_project 4 153319447 153330776 + Atp13a2 protein_coding retained_intron MGP_CBAJ_T0068548.1 MGP_CBAJ_G0028695.1 mouse_genomes_project 4 153319524 153343520 + MGP_CBAJ_P0068548 Atp13a2 protein_coding protein_coding MGP_CBAJ_T0068549.1 MGP_CBAJ_G0028695.1 mouse_genomes_project 4 153328152 153338118 + Atp13a2 protein_coding processed_transcript MGP_CBAJ_T0068550.1 MGP_CBAJ_G0028695.1 mouse_genomes_project 4 153328762 153337057 + Atp13a2 protein_coding processed_transcript MGP_CBAJ_T0068551.1 MGP_CBAJ_G0028695.1 mouse_genomes_project 4 153336894 153338274 + Atp13a2 protein_coding processed_transcript MGP_CBAJ_T0068552.1 MGP_CBAJ_G0028695.1 mouse_genomes_project 4 153340600 153342907 + Atp13a2 protein_coding retained_intron MGP_CBAJ_T0007761.1 MGP_CBAJ_G0006337.1 mouse_genomes_project 4 62226309 62234081 + lincRNA lincRNA MGP_CBAJ_T0064751.1 MGP_CBAJ_G0027841.1 mouse_genomes_project 4 42550560 42560972 - MGP_CBAJ_P0064751 Arid3c protein_coding protein_coding MGP_CBAJ_T0064752.1 MGP_CBAJ_G0027841.1 mouse_genomes_project 4 42550863 42557001 - MGP_CBAJ_P0064752 Arid3c protein_coding protein_coding MGP_CBAJ_T0064753.1 MGP_CBAJ_G0027841.1 mouse_genomes_project 4 42550863 42557001 - MGP_CBAJ_P0064753 Arid3c protein_coding protein_coding MGP_CBAJ_T0064754.1 MGP_CBAJ_G0027841.1 mouse_genomes_project 4 42556640 42560972 - MGP_CBAJ_P0064754 Arid3c protein_coding protein_coding MGP_CBAJ_T0011450.1 MGP_CBAJ_G0009588.1 mouse_genomes_project 4 117620408 117620682 - Gm23743 misc_RNA misc_RNA MGP_CBAJ_T0098206.1 MGP_CBAJ_G0036479.1 mouse_genomes_project 4 143487663 143487828 - Gm22767 scaRNA scaRNA MGP_CBAJ_T0065505.1 MGP_CBAJ_G0028005.1 mouse_genomes_project 4 62797351 62807188 - MGP_CBAJ_P0065505 Inip protein_coding protein_coding MGP_CBAJ_T0065506.1 MGP_CBAJ_G0028005.1 mouse_genomes_project 4 62799075 62808748 - Inip protein_coding processed_transcript MGP_CBAJ_T0065507.1 MGP_CBAJ_G0028005.1 mouse_genomes_project 4 62805921 62808759 - Inip protein_coding processed_transcript MGP_CBAJ_T0014428.1 MGP_CBAJ_G0012540.1 mouse_genomes_project 4 88121325 88121592 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0065636.1 MGP_CBAJ_G0028046.1 mouse_genomes_project 4 74235077 74438997 - MGP_CBAJ_P0065636 Cdk5rap2 protein_coding protein_coding MGP_CBAJ_T0065637.1 MGP_CBAJ_G0028046.1 mouse_genomes_project 4 74241262 74438972 - MGP_CBAJ_P0065637 Cdk5rap2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065638.1 MGP_CBAJ_G0028046.1 mouse_genomes_project 4 74256589 74292505 - MGP_CBAJ_P0065638 Cdk5rap2 protein_coding protein_coding MGP_CBAJ_T0065639.1 MGP_CBAJ_G0028046.1 mouse_genomes_project 4 74260710 74262092 - Cdk5rap2 protein_coding processed_transcript MGP_CBAJ_T0065640.1 MGP_CBAJ_G0028046.1 mouse_genomes_project 4 74427437 74432093 - Cdk5rap2 protein_coding processed_transcript MGP_CBAJ_T0007921.1 MGP_CBAJ_G0006458.1 mouse_genomes_project 4 163876136 163883219 + Gm16188 lincRNA lincRNA MGP_CBAJ_T0014604.1 MGP_CBAJ_G0012716.1 mouse_genomes_project 4 156519710 156520271 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010533.1 MGP_CBAJ_G0008671.1 mouse_genomes_project 4 171151110 171151200 - Mir200a miRNA miRNA MGP_CBAJ_T0014368.1 MGP_CBAJ_G0012480.1 mouse_genomes_project 4 57832216 57832459 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067352.1 MGP_CBAJ_G0028433.1 mouse_genomes_project 4 135852612 135889627 + MGP_CBAJ_P0067352 Stk40 protein_coding protein_coding MGP_CBAJ_T0067353.1 MGP_CBAJ_G0028433.1 mouse_genomes_project 4 135852627 135889628 + MGP_CBAJ_P0067353 Stk40 protein_coding protein_coding MGP_CBAJ_T0067354.1 MGP_CBAJ_G0028433.1 mouse_genomes_project 4 135852656 135873730 + MGP_CBAJ_P0067354 Stk40 protein_coding protein_coding MGP_CBAJ_T0067355.1 MGP_CBAJ_G0028433.1 mouse_genomes_project 4 135852690 135866307 + Stk40 protein_coding processed_transcript MGP_CBAJ_T0067356.1 MGP_CBAJ_G0028433.1 mouse_genomes_project 4 135866880 135877575 + MGP_CBAJ_P0067356 Stk40 protein_coding protein_coding MGP_CBAJ_T0067357.1 MGP_CBAJ_G0028433.1 mouse_genomes_project 4 135877425 135881403 + Stk40 protein_coding processed_transcript MGP_CBAJ_T0004373.1 MGP_CBAJ_G0003808.1 mouse_genomes_project 4 55979082 55980797 - 1700060J05Rik antisense antisense MGP_CBAJ_T0068099.1 MGP_CBAJ_G0028587.1 mouse_genomes_project 4 145362721 145382059 - MGP_CBAJ_P0068099 Extl1 protein_coding protein_coding MGP_CBAJ_T0068100.1 MGP_CBAJ_G0028587.1 mouse_genomes_project 4 145370119 145393449 - Extl1 protein_coding processed_transcript MGP_CBAJ_T0068101.1 MGP_CBAJ_G0028587.1 mouse_genomes_project 4 145372255 145374967 - Extl1 protein_coding processed_transcript MGP_CBAJ_T0099243.1 MGP_CBAJ_G0037498.1 mouse_genomes_project 4 24297166 24297328 - Gm25513 snRNA snRNA MGP_CBAJ_T0007852.1 MGP_CBAJ_G0006407.1 mouse_genomes_project 4 137425035 137427052 + 4930471C06Rik lincRNA lincRNA MGP_CBAJ_T0007853.1 MGP_CBAJ_G0006407.1 mouse_genomes_project 4 137425121 137427052 + 4930471C06Rik lincRNA lincRNA MGP_CBAJ_T0069170.1 MGP_CBAJ_G0028847.1 mouse_genomes_project 4 167053201 167162520 + Nphp4 protein_coding processed_transcript MGP_CBAJ_T0069171.1 MGP_CBAJ_G0028847.1 mouse_genomes_project 4 167054393 167162249 + MGP_CBAJ_P0069171 Nphp4 protein_coding unknown_likely_coding MGP_CBAJ_T0069172.1 MGP_CBAJ_G0028847.1 mouse_genomes_project 4 167054673 167070395 + Nphp4 protein_coding processed_transcript MGP_CBAJ_T0069173.1 MGP_CBAJ_G0028847.1 mouse_genomes_project 4 167068299 167081975 + Nphp4 protein_coding processed_transcript MGP_CBAJ_T0069174.1 MGP_CBAJ_G0028847.1 mouse_genomes_project 4 167086647 167105323 + Nphp4 protein_coding processed_transcript MGP_CBAJ_T0007773.1 MGP_CBAJ_G0006349.1 mouse_genomes_project 4 87345211 87347108 - lincRNA lincRNA MGP_CBAJ_T0067282.1 MGP_CBAJ_G0028415.1 mouse_genomes_project 4 134412309 134477281 + MGP_CBAJ_P0067282 Inpp5b protein_coding protein_coding MGP_CBAJ_T0067283.1 MGP_CBAJ_G0028415.1 mouse_genomes_project 4 134412317 134424734 + MGP_CBAJ_P0067283 Inpp5b protein_coding protein_coding MGP_CBAJ_T0067284.1 MGP_CBAJ_G0028415.1 mouse_genomes_project 4 134412331 134477275 + MGP_CBAJ_P0067284 Inpp5b protein_coding nonsense_mediated_decay MGP_CBAJ_T0067285.1 MGP_CBAJ_G0028415.1 mouse_genomes_project 4 134412337 134424696 + MGP_CBAJ_P0067285 Inpp5b protein_coding protein_coding MGP_CBAJ_T0067286.1 MGP_CBAJ_G0028415.1 mouse_genomes_project 4 134442542 134458240 + Inpp5b protein_coding processed_transcript MGP_CBAJ_T0067287.1 MGP_CBAJ_G0028415.1 mouse_genomes_project 4 134442648 134458293 + Inpp5b protein_coding processed_transcript MGP_CBAJ_T0067288.1 MGP_CBAJ_G0028415.1 mouse_genomes_project 4 134470928 134473651 + Inpp5b protein_coding processed_transcript MGP_CBAJ_T0067289.1 MGP_CBAJ_G0028415.1 mouse_genomes_project 4 134475317 134476880 + Inpp5b protein_coding processed_transcript MGP_CBAJ_T0065915.1 MGP_CBAJ_G0028112.1 mouse_genomes_project 4 101219663 101220196 + MGP_CBAJ_P0065915 Gm10306 protein_coding protein_coding MGP_CBAJ_T0067836.1 MGP_CBAJ_G0028530.1 mouse_genomes_project 4 142879309 142897101 - MGP_CBAJ_P0067836 Trnau1ap protein_coding protein_coding MGP_CBAJ_T0067837.1 MGP_CBAJ_G0028530.1 mouse_genomes_project 4 142879309 142897052 - MGP_CBAJ_P0067837 Trnau1ap protein_coding protein_coding MGP_CBAJ_T0067838.1 MGP_CBAJ_G0028530.1 mouse_genomes_project 4 142879311 142897079 - Trnau1ap protein_coding retained_intron MGP_CBAJ_T0067839.1 MGP_CBAJ_G0028530.1 mouse_genomes_project 4 142879395 142897057 - Trnau1ap protein_coding processed_transcript MGP_CBAJ_T0067840.1 MGP_CBAJ_G0028530.1 mouse_genomes_project 4 142879411 142896952 - MGP_CBAJ_P0067840 Trnau1ap protein_coding nonsense_mediated_decay MGP_CBAJ_T0067841.1 MGP_CBAJ_G0028530.1 mouse_genomes_project 4 142881753 142896977 - MGP_CBAJ_P0067841 Trnau1ap protein_coding protein_coding MGP_CBAJ_T0067842.1 MGP_CBAJ_G0028530.1 mouse_genomes_project 4 142881859 142897067 - MGP_CBAJ_P0067842 Trnau1ap protein_coding nonsense_mediated_decay MGP_CBAJ_T0067843.1 MGP_CBAJ_G0028530.1 mouse_genomes_project 4 142881896 142897045 - Trnau1ap protein_coding processed_transcript MGP_CBAJ_T0067844.1 MGP_CBAJ_G0028530.1 mouse_genomes_project 4 142881899 142897101 - MGP_CBAJ_P0067844 Trnau1ap protein_coding nonsense_mediated_decay MGP_CBAJ_T0067845.1 MGP_CBAJ_G0028530.1 mouse_genomes_project 4 142888763 142892839 - Trnau1ap protein_coding retained_intron MGP_CBAJ_T0067846.1 MGP_CBAJ_G0028530.1 mouse_genomes_project 4 142889241 142897101 - MGP_CBAJ_P0067846 Trnau1ap protein_coding protein_coding MGP_CBAJ_T0067847.1 MGP_CBAJ_G0028530.1 mouse_genomes_project 4 142895671 142897078 - Trnau1ap protein_coding retained_intron MGP_CBAJ_T0069421.1 MGP_CBAJ_G0028894.1 mouse_genomes_project 4 170873315 170885346 + MGP_CBAJ_P0069421 Ccnl2 protein_coding protein_coding MGP_CBAJ_T0069422.1 MGP_CBAJ_G0028894.1 mouse_genomes_project 4 170873327 170885346 + Ccnl2 protein_coding retained_intron MGP_CBAJ_T0069423.1 MGP_CBAJ_G0028894.1 mouse_genomes_project 4 170873345 170882625 + Ccnl2 protein_coding retained_intron MGP_CBAJ_T0069424.1 MGP_CBAJ_G0028894.1 mouse_genomes_project 4 170873604 170876673 + Ccnl2 protein_coding retained_intron MGP_CBAJ_T0069425.1 MGP_CBAJ_G0028894.1 mouse_genomes_project 4 170874311 170885106 + MGP_CBAJ_P0069425 Ccnl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069426.1 MGP_CBAJ_G0028894.1 mouse_genomes_project 4 170879669 170885156 + MGP_CBAJ_P0069426 Ccnl2 protein_coding unknown_likely_coding MGP_CBAJ_T0064478.1 MGP_CBAJ_G0027774.1 mouse_genomes_project 4 23890515 23934060 - MGP_CBAJ_P0064478 Fhl5 protein_coding protein_coding MGP_CBAJ_T0064479.1 MGP_CBAJ_G0027774.1 mouse_genomes_project 4 23890515 23934060 - MGP_CBAJ_P0064479 Fhl5 protein_coding protein_coding MGP_CBAJ_T0065150.1 MGP_CBAJ_G0027910.1 mouse_genomes_project 4 46683443 46700742 - MGP_CBAJ_P0065150 Slc25a51 protein_coding protein_coding MGP_CBAJ_T0065151.1 MGP_CBAJ_G0027910.1 mouse_genomes_project 4 46683443 46700747 - MGP_CBAJ_P0065151 Slc25a51 protein_coding protein_coding MGP_CBAJ_T0065152.1 MGP_CBAJ_G0027910.1 mouse_genomes_project 4 46691206 46700741 - MGP_CBAJ_P0065152 Slc25a51 protein_coding protein_coding MGP_CBAJ_T0065153.1 MGP_CBAJ_G0027910.1 mouse_genomes_project 4 46691537 46700627 - MGP_CBAJ_P0065153 Slc25a51 protein_coding protein_coding MGP_CBAJ_T0065154.1 MGP_CBAJ_G0027910.1 mouse_genomes_project 4 46691567 46696838 - MGP_CBAJ_P0065154 Slc25a51 protein_coding protein_coding MGP_CBAJ_T0065155.1 MGP_CBAJ_G0027910.1 mouse_genomes_project 4 46699152 46700716 - Slc25a51 protein_coding processed_transcript MGP_CBAJ_T0066640.1 MGP_CBAJ_G0028262.1 mouse_genomes_project 4 123747616 123782348 + MGP_CBAJ_P0066640 protein_coding protein_coding MGP_CBAJ_T0014290.1 MGP_CBAJ_G0012402.1 mouse_genomes_project 4 29636884 29637419 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068686.1 MGP_CBAJ_G0028727.1 mouse_genomes_project 4 155880414 155990411 - MGP_CBAJ_P0068686 Prdm2 protein_coding protein_coding MGP_CBAJ_T0068687.1 MGP_CBAJ_G0028727.1 mouse_genomes_project 4 155937129 155970952 - MGP_CBAJ_P0068687 Prdm2 protein_coding protein_coding MGP_CBAJ_T0068688.1 MGP_CBAJ_G0028727.1 mouse_genomes_project 4 155937153 155990415 - MGP_CBAJ_P0068688 Prdm2 protein_coding protein_coding MGP_CBAJ_T0068689.1 MGP_CBAJ_G0028727.1 mouse_genomes_project 4 155954896 155990701 - Prdm2 protein_coding processed_transcript MGP_CBAJ_T0068802.1 MGP_CBAJ_G0028781.1 mouse_genomes_project 4 161847370 161884026 - MGP_CBAJ_P0068802 Draxin protein_coding protein_coding MGP_CBAJ_T0100580.1 MGP_CBAJ_G0038835.1 mouse_genomes_project 4 141075569 141075642 + Snord85 snoRNA snoRNA MGP_CBAJ_T0068882.1 MGP_CBAJ_G0028795.1 mouse_genomes_project 4 162728196 162890325 + MGP_CBAJ_P0068882 Casz1 protein_coding protein_coding MGP_CBAJ_T0068883.1 MGP_CBAJ_G0028795.1 mouse_genomes_project 4 162728196 162900153 + MGP_CBAJ_P0068883 Casz1 protein_coding protein_coding MGP_CBAJ_T0068884.1 MGP_CBAJ_G0028795.1 mouse_genomes_project 4 162728232 162770129 + Casz1 protein_coding processed_transcript MGP_CBAJ_T0068885.1 MGP_CBAJ_G0028795.1 mouse_genomes_project 4 162828418 162831036 + Casz1 protein_coding processed_transcript MGP_CBAJ_T0068886.1 MGP_CBAJ_G0028795.1 mouse_genomes_project 4 162840287 162878012 + MGP_CBAJ_P0068886 Casz1 protein_coding protein_coding MGP_CBAJ_T0068887.1 MGP_CBAJ_G0028795.1 mouse_genomes_project 4 162878229 162885624 + MGP_CBAJ_P0068887 Casz1 protein_coding protein_coding MGP_CBAJ_T0100560.1 MGP_CBAJ_G0038815.1 mouse_genomes_project 4 100139608 100139736 - Gm23443 snoRNA snoRNA MGP_CBAJ_T0099237.1 MGP_CBAJ_G0037492.1 mouse_genomes_project 4 6773575 6773738 - Gm24152 snRNA snRNA MGP_CBAJ_T0014285.1 MGP_CBAJ_G0012397.1 mouse_genomes_project 4 27794234 27794498 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101911.1 MGP_CBAJ_G0039942.1 mouse_genomes_project 4 127719793 127720707 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0064813.1 MGP_CBAJ_G0027852.1 mouse_genomes_project 4 42607965 42608555 - MGP_CBAJ_P0064813 protein_coding protein_coding MGP_CBAJ_T0066126.1 MGP_CBAJ_G0028163.1 mouse_genomes_project 4 109443280 109445662 + MGP_CBAJ_P0066126 protein_coding protein_coding MGP_CBAJ_T0007814.1 MGP_CBAJ_G0006382.1 mouse_genomes_project 4 114343937 114344924 + Gm12730 lincRNA lincRNA MGP_CBAJ_T0010508.1 MGP_CBAJ_G0008646.1 mouse_genomes_project 4 144382351 144382477 - Gm23158 miRNA miRNA MGP_CBAJ_T0067022.1 MGP_CBAJ_G0028341.1 mouse_genomes_project 4 127768200 127769148 + MGP_CBAJ_P0067022 Olfr1340 protein_coding protein_coding MGP_CBAJ_T0065607.1 MGP_CBAJ_G0028035.1 mouse_genomes_project 4 66975915 67008805 + MGP_CBAJ_P0065607 Tmem268 protein_coding protein_coding MGP_CBAJ_T0065608.1 MGP_CBAJ_G0028035.1 mouse_genomes_project 4 66975990 66979626 + Tmem268 protein_coding processed_transcript MGP_CBAJ_T0065609.1 MGP_CBAJ_G0028035.1 mouse_genomes_project 4 66977361 66987165 + MGP_CBAJ_P0065609 Tmem268 protein_coding protein_coding MGP_CBAJ_T0065610.1 MGP_CBAJ_G0028035.1 mouse_genomes_project 4 66977361 66987196 + MGP_CBAJ_P0065610 Tmem268 protein_coding protein_coding MGP_CBAJ_T0065611.1 MGP_CBAJ_G0028035.1 mouse_genomes_project 4 66977494 67008801 + MGP_CBAJ_P0065611 Tmem268 protein_coding protein_coding MGP_CBAJ_T0014199.1 MGP_CBAJ_G0012311.1 mouse_genomes_project 4 2233858 2234330 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067077.1 MGP_CBAJ_G0028361.1 mouse_genomes_project 4 128444726 128470887 - MGP_CBAJ_P0067077 Ppih protein_coding protein_coding MGP_CBAJ_T0067078.1 MGP_CBAJ_G0028361.1 mouse_genomes_project 4 128444726 128470874 - MGP_CBAJ_P0067078 Ppih protein_coding protein_coding MGP_CBAJ_T0067079.1 MGP_CBAJ_G0028361.1 mouse_genomes_project 4 128444726 128470936 - MGP_CBAJ_P0067079 Ppih protein_coding protein_coding MGP_CBAJ_T0067080.1 MGP_CBAJ_G0028361.1 mouse_genomes_project 4 128457021 128470807 - MGP_CBAJ_P0067080 Ppih protein_coding protein_coding MGP_CBAJ_T0067081.1 MGP_CBAJ_G0028361.1 mouse_genomes_project 4 128457594 128470874 - MGP_CBAJ_P0067081 Ppih protein_coding protein_coding MGP_CBAJ_T0067082.1 MGP_CBAJ_G0028361.1 mouse_genomes_project 4 128461713 128470889 - MGP_CBAJ_P0067082 Ppih protein_coding protein_coding MGP_CBAJ_T0069523.1 MGP_CBAJ_G0028913.1 mouse_genomes_project 4 171318877 171320726 + MGP_CBAJ_P0069523 AW011738 protein_coding protein_coding MGP_CBAJ_T0099308.1 MGP_CBAJ_G0037563.1 mouse_genomes_project 4 143152959 143153063 - Gm24762 snRNA snRNA MGP_CBAJ_T0014293.1 MGP_CBAJ_G0012405.1 mouse_genomes_project 4 31624183 31627733 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014256.1 MGP_CBAJ_G0012368.1 mouse_genomes_project 4 20512225 20512624 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065478.1 MGP_CBAJ_G0027999.1 mouse_genomes_project 4 61987278 62063973 - MGP_CBAJ_P0065478 AI481877 protein_coding protein_coding MGP_CBAJ_T0065479.1 MGP_CBAJ_G0027999.1 mouse_genomes_project 4 62032187 62061111 - AI481877 protein_coding retained_intron MGP_CBAJ_T0007900.1 MGP_CBAJ_G0006438.1 mouse_genomes_project 4 148761160 148767158 - Gm13003 lincRNA lincRNA MGP_CBAJ_T0007707.1 MGP_CBAJ_G0006291.1 mouse_genomes_project 4 11715985 11734013 - 1700120G11Rik lincRNA lincRNA MGP_CBAJ_T0099270.1 MGP_CBAJ_G0037525.1 mouse_genomes_project 4 89088537 89088678 - Gm25899 snRNA snRNA MGP_CBAJ_T0066396.1 MGP_CBAJ_G0028213.1 mouse_genomes_project 4 116321422 116409701 - MGP_CBAJ_P0066396 Scp2 protein_coding protein_coding MGP_CBAJ_T0066397.1 MGP_CBAJ_G0028213.1 mouse_genomes_project 4 116321850 116325553 - Scp2 protein_coding processed_transcript MGP_CBAJ_T0066398.1 MGP_CBAJ_G0028213.1 mouse_genomes_project 4 116321960 116349386 - Scp2 protein_coding processed_transcript MGP_CBAJ_T0066399.1 MGP_CBAJ_G0028213.1 mouse_genomes_project 4 116322132 116349442 - MGP_CBAJ_P0066399 Scp2 protein_coding protein_coding MGP_CBAJ_T0066400.1 MGP_CBAJ_G0028213.1 mouse_genomes_project 4 116322534 116409645 - Scp2 protein_coding processed_transcript MGP_CBAJ_T0066401.1 MGP_CBAJ_G0028213.1 mouse_genomes_project 4 116367470 116409673 - MGP_CBAJ_P0066401 Scp2 protein_coding protein_coding MGP_CBAJ_T0066402.1 MGP_CBAJ_G0028213.1 mouse_genomes_project 4 116371466 116409564 - Scp2 protein_coding processed_transcript MGP_CBAJ_T0066403.1 MGP_CBAJ_G0028213.1 mouse_genomes_project 4 116371775 116445360 - Scp2 protein_coding processed_transcript MGP_CBAJ_T0066404.1 MGP_CBAJ_G0028213.1 mouse_genomes_project 4 116388292 116445364 - MGP_CBAJ_P0066404 Scp2 protein_coding protein_coding MGP_CBAJ_T0065592.1 MGP_CBAJ_G0028034.1 mouse_genomes_project 4 66824930 66915799 - MGP_CBAJ_P0065592 Whrn protein_coding protein_coding MGP_CBAJ_T0065593.1 MGP_CBAJ_G0028034.1 mouse_genomes_project 4 66824935 66914166 - Whrn protein_coding processed_transcript MGP_CBAJ_T0065594.1 MGP_CBAJ_G0028034.1 mouse_genomes_project 4 66824935 66843366 - Whrn protein_coding retained_intron MGP_CBAJ_T0065595.1 MGP_CBAJ_G0028034.1 mouse_genomes_project 4 66824935 66843366 - Whrn protein_coding retained_intron MGP_CBAJ_T0065596.1 MGP_CBAJ_G0028034.1 mouse_genomes_project 4 66824935 66916517 - MGP_CBAJ_P0065596 Whrn protein_coding protein_coding MGP_CBAJ_T0065597.1 MGP_CBAJ_G0028034.1 mouse_genomes_project 4 66824935 66916517 - MGP_CBAJ_P0065597 Whrn protein_coding protein_coding MGP_CBAJ_T0065598.1 MGP_CBAJ_G0028034.1 mouse_genomes_project 4 66824935 66916517 - MGP_CBAJ_P0065598 Whrn protein_coding protein_coding MGP_CBAJ_T0065599.1 MGP_CBAJ_G0028034.1 mouse_genomes_project 4 66824935 66916517 - MGP_CBAJ_P0065599 Whrn protein_coding protein_coding MGP_CBAJ_T0065600.1 MGP_CBAJ_G0028034.1 mouse_genomes_project 4 66829497 66841974 - MGP_CBAJ_P0065600 Whrn protein_coding nonsense_mediated_decay MGP_CBAJ_T0065601.1 MGP_CBAJ_G0028034.1 mouse_genomes_project 4 66835753 66842047 - Whrn protein_coding processed_transcript MGP_CBAJ_T0065602.1 MGP_CBAJ_G0028034.1 mouse_genomes_project 4 66841477 66916557 - MGP_CBAJ_P0065602 Whrn protein_coding protein_coding MGP_CBAJ_T0065603.1 MGP_CBAJ_G0028034.1 mouse_genomes_project 4 66844844 66878572 - Whrn protein_coding retained_intron MGP_CBAJ_T0065604.1 MGP_CBAJ_G0028034.1 mouse_genomes_project 4 66846272 66893350 - MGP_CBAJ_P0065604 Whrn protein_coding protein_coding MGP_CBAJ_T0065605.1 MGP_CBAJ_G0028034.1 mouse_genomes_project 4 66877432 66915325 - MGP_CBAJ_P0065605 Whrn protein_coding protein_coding MGP_CBAJ_T0065606.1 MGP_CBAJ_G0028034.1 mouse_genomes_project 4 66878089 66915243 - Whrn protein_coding retained_intron MGP_CBAJ_T0068723.1 MGP_CBAJ_G0028749.1 mouse_genomes_project 4 157450292 157470350 + MGP_CBAJ_P0068723 protein_coding protein_coding MGP_CBAJ_T0065256.1 MGP_CBAJ_G0027936.1 mouse_genomes_project 4 49692733 49738860 + MGP_CBAJ_P0065256 Nr4a3 protein_coding protein_coding MGP_CBAJ_T0065257.1 MGP_CBAJ_G0027936.1 mouse_genomes_project 4 49692811 49697745 + Nr4a3 protein_coding processed_transcript MGP_CBAJ_T0065258.1 MGP_CBAJ_G0027936.1 mouse_genomes_project 4 49696693 49738862 + MGP_CBAJ_P0065258 Nr4a3 protein_coding protein_coding MGP_CBAJ_T0065259.1 MGP_CBAJ_G0027936.1 mouse_genomes_project 4 49698827 49704319 + Nr4a3 protein_coding processed_transcript MGP_CBAJ_T0067735.1 MGP_CBAJ_G0028509.1 mouse_genomes_project 4 140693556 140725568 - MGP_CBAJ_P0067735 Serinc2 protein_coding protein_coding MGP_CBAJ_T0067736.1 MGP_CBAJ_G0028509.1 mouse_genomes_project 4 140693556 140725200 - MGP_CBAJ_P0067736 Serinc2 protein_coding protein_coding MGP_CBAJ_T0067737.1 MGP_CBAJ_G0028509.1 mouse_genomes_project 4 140693960 140729163 - MGP_CBAJ_P0067737 Serinc2 protein_coding protein_coding MGP_CBAJ_T0067738.1 MGP_CBAJ_G0028509.1 mouse_genomes_project 4 140713011 140725514 - MGP_CBAJ_P0067738 Serinc2 protein_coding protein_coding MGP_CBAJ_T0067739.1 MGP_CBAJ_G0028509.1 mouse_genomes_project 4 140713626 140725527 - MGP_CBAJ_P0067739 Serinc2 protein_coding protein_coding MGP_CBAJ_T0014500.1 MGP_CBAJ_G0012612.1 mouse_genomes_project 4 116837221 116837757 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004477.1 MGP_CBAJ_G0003886.1 mouse_genomes_project 4 150003286 150004211 - 1700095J12Rik antisense antisense MGP_CBAJ_T0014546.1 MGP_CBAJ_G0012658.1 mouse_genomes_project 4 130785725 130785966 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0067835.1 MGP_CBAJ_G0028529.1 mouse_genomes_project 4 142866848 142868037 - MGP_CBAJ_P0067835 Rab42 protein_coding protein_coding MGP_CBAJ_T0014209.1 MGP_CBAJ_G0012321.1 mouse_genomes_project 4 5915619 5916017 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0067413.1 MGP_CBAJ_G0028445.1 mouse_genomes_project 4 136345471 136391549 + MGP_CBAJ_P0067413 Clspn protein_coding protein_coding MGP_CBAJ_T0067414.1 MGP_CBAJ_G0028445.1 mouse_genomes_project 4 136345531 136351805 + MGP_CBAJ_P0067414 Clspn protein_coding protein_coding MGP_CBAJ_T0067415.1 MGP_CBAJ_G0028445.1 mouse_genomes_project 4 136345541 136355130 + Clspn protein_coding processed_transcript MGP_CBAJ_T0067416.1 MGP_CBAJ_G0028445.1 mouse_genomes_project 4 136345650 136391178 + MGP_CBAJ_P0067416 Clspn protein_coding unknown_likely_coding MGP_CBAJ_T0067417.1 MGP_CBAJ_G0028445.1 mouse_genomes_project 4 136351796 136357566 + MGP_CBAJ_P0067417 Clspn protein_coding protein_coding MGP_CBAJ_T0067418.1 MGP_CBAJ_G0028445.1 mouse_genomes_project 4 136357847 136369040 + MGP_CBAJ_P0067418 Clspn protein_coding protein_coding MGP_CBAJ_T0067419.1 MGP_CBAJ_G0028445.1 mouse_genomes_project 4 136363706 136366540 + Clspn protein_coding processed_transcript MGP_CBAJ_T0067420.1 MGP_CBAJ_G0028445.1 mouse_genomes_project 4 136372610 136387874 + Clspn protein_coding processed_transcript MGP_CBAJ_T0065623.1 MGP_CBAJ_G0028042.1 mouse_genomes_project 4 68995878 70078801 - MGP_CBAJ_P0065623 Astn2 protein_coding protein_coding MGP_CBAJ_T0065624.1 MGP_CBAJ_G0028042.1 mouse_genomes_project 4 68995878 70078673 - MGP_CBAJ_P0065624 Astn2 protein_coding protein_coding MGP_CBAJ_T0098393.1 MGP_CBAJ_G0036659.1 mouse_genomes_project 4 166729347 166729802 + Gm13096 sense_intronic sense_intronic MGP_CBAJ_T0007933.1 MGP_CBAJ_G0006470.1 mouse_genomes_project 4 170819129 170825338 + Gm26840 lincRNA lincRNA MGP_CBAJ_T0064402.1 MGP_CBAJ_G0027758.1 mouse_genomes_project 4 18224773 18241278 + MGP_CBAJ_P0064402 Ttpa protein_coding protein_coding MGP_CBAJ_T0064403.1 MGP_CBAJ_G0027758.1 mouse_genomes_project 4 18225278 18250866 + MGP_CBAJ_P0064403 Ttpa protein_coding protein_coding MGP_CBAJ_T0001369.1 MGP_CBAJ_G0001295.1 mouse_genomes_project 4 14153574 14154180 + TEC TEC MGP_CBAJ_T0067908.1 MGP_CBAJ_G0028544.1 mouse_genomes_project 4 143507480 143540946 - MGP_CBAJ_P0067908 Stx12 protein_coding protein_coding MGP_CBAJ_T0067909.1 MGP_CBAJ_G0028544.1 mouse_genomes_project 4 143511025 143518953 - Stx12 protein_coding processed_transcript MGP_CBAJ_T0014419.1 MGP_CBAJ_G0012531.1 mouse_genomes_project 4 83193498 83194440 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099275.1 MGP_CBAJ_G0037530.1 mouse_genomes_project 4 102273645 102273809 + Gm25004 snRNA snRNA MGP_CBAJ_T0067119.1 MGP_CBAJ_G0028369.1 mouse_genomes_project 4 128844767 128848270 - MGP_CBAJ_P0067119 Guca2b protein_coding protein_coding MGP_CBAJ_T0067120.1 MGP_CBAJ_G0028369.1 mouse_genomes_project 4 128844767 128848443 - MGP_CBAJ_P0067120 Guca2b protein_coding protein_coding MGP_CBAJ_T0065876.1 MGP_CBAJ_G0028092.1 mouse_genomes_project 4 94750019 94750949 - MGP_CBAJ_P0065876 protein_coding protein_coding MGP_CBAJ_T0007809.1 MGP_CBAJ_G0006378.1 mouse_genomes_project 4 110949171 110954396 + lincRNA lincRNA MGP_CBAJ_T0100520.1 MGP_CBAJ_G0038775.1 mouse_genomes_project 4 27500932 27501061 + Gm25378 snoRNA snoRNA MGP_CBAJ_T0064243.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6504548 6534684 - Asph protein_coding processed_transcript MGP_CBAJ_T0064244.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6505558 6738817 - MGP_CBAJ_P0064244 Asph protein_coding protein_coding MGP_CBAJ_T0064245.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6505558 6738817 - MGP_CBAJ_P0064245 Asph protein_coding protein_coding MGP_CBAJ_T0064246.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6505558 6738999 - MGP_CBAJ_P0064246 Asph protein_coding protein_coding MGP_CBAJ_T0064247.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6645906 6659489 - Asph protein_coding processed_transcript MGP_CBAJ_T0064248.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6646299 6706879 - MGP_CBAJ_P0064248 Asph protein_coding protein_coding MGP_CBAJ_T0064249.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6646299 6706879 - MGP_CBAJ_P0064249 Asph protein_coding protein_coding MGP_CBAJ_T0064250.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6646299 6706879 - MGP_CBAJ_P0064250 Asph protein_coding protein_coding MGP_CBAJ_T0064251.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6646299 6738817 - MGP_CBAJ_P0064251 Asph protein_coding protein_coding MGP_CBAJ_T0064252.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6646299 6738817 - MGP_CBAJ_P0064252 Asph protein_coding protein_coding MGP_CBAJ_T0064253.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6667757 6702416 - Asph protein_coding processed_transcript MGP_CBAJ_T0064254.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6670883 6706879 - MGP_CBAJ_P0064254 Asph protein_coding protein_coding MGP_CBAJ_T0064255.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6673930 6738817 - MGP_CBAJ_P0064255 Asph protein_coding protein_coding MGP_CBAJ_T0064256.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6684069 6706879 - MGP_CBAJ_P0064256 Asph protein_coding protein_coding MGP_CBAJ_T0064257.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6684856 6738817 - MGP_CBAJ_P0064257 Asph protein_coding protein_coding MGP_CBAJ_T0064258.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6692229 6738817 - MGP_CBAJ_P0064258 Asph protein_coding protein_coding MGP_CBAJ_T0064259.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6693755 6738817 - MGP_CBAJ_P0064259 Asph protein_coding protein_coding MGP_CBAJ_T0064260.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6694134 6738976 - MGP_CBAJ_P0064260 Asph protein_coding protein_coding MGP_CBAJ_T0064261.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6696324 6706879 - Asph protein_coding processed_transcript MGP_CBAJ_T0064262.1 MGP_CBAJ_G0027717.1 mouse_genomes_project 4 6737959 6738733 - Asph protein_coding processed_transcript MGP_CBAJ_T0068086.1 MGP_CBAJ_G0028583.1 mouse_genomes_project 4 145262008 145274267 - MGP_CBAJ_P0068086 Pdik1l protein_coding protein_coding MGP_CBAJ_T0068087.1 MGP_CBAJ_G0028583.1 mouse_genomes_project 4 145262008 145274923 - MGP_CBAJ_P0068087 Pdik1l protein_coding protein_coding MGP_CBAJ_T0068088.1 MGP_CBAJ_G0028583.1 mouse_genomes_project 4 145262009 145274281 - MGP_CBAJ_P0068088 Pdik1l protein_coding protein_coding MGP_CBAJ_T0068089.1 MGP_CBAJ_G0028583.1 mouse_genomes_project 4 145265542 145274253 - MGP_CBAJ_P0068089 Pdik1l protein_coding protein_coding MGP_CBAJ_T0068090.1 MGP_CBAJ_G0028583.1 mouse_genomes_project 4 145266356 145274278 - MGP_CBAJ_P0068090 Pdik1l protein_coding protein_coding MGP_CBAJ_T0068091.1 MGP_CBAJ_G0028583.1 mouse_genomes_project 4 145270600 145274253 - Pdik1l protein_coding processed_transcript MGP_CBAJ_T0067430.1 MGP_CBAJ_G0028450.1 mouse_genomes_project 4 136576944 136614525 + MGP_CBAJ_P0067430 AU040320 protein_coding protein_coding MGP_CBAJ_T0067431.1 MGP_CBAJ_G0028450.1 mouse_genomes_project 4 136576953 136614636 + MGP_CBAJ_P0067431 AU040320 protein_coding protein_coding MGP_CBAJ_T0067432.1 MGP_CBAJ_G0028450.1 mouse_genomes_project 4 136576955 136704284 + MGP_CBAJ_P0067432 AU040320 protein_coding protein_coding MGP_CBAJ_T0067433.1 MGP_CBAJ_G0028450.1 mouse_genomes_project 4 136577170 136685505 + MGP_CBAJ_P0067433 AU040320 protein_coding protein_coding MGP_CBAJ_T0067434.1 MGP_CBAJ_G0028450.1 mouse_genomes_project 4 136577170 136704284 + MGP_CBAJ_P0067434 AU040320 protein_coding protein_coding MGP_CBAJ_T0067435.1 MGP_CBAJ_G0028450.1 mouse_genomes_project 4 136577194 136614539 + MGP_CBAJ_P0067435 AU040320 protein_coding protein_coding MGP_CBAJ_T0067436.1 MGP_CBAJ_G0028450.1 mouse_genomes_project 4 136577214 136610955 + AU040320 protein_coding processed_transcript MGP_CBAJ_T0067437.1 MGP_CBAJ_G0028450.1 mouse_genomes_project 4 136577226 136578134 + AU040320 protein_coding processed_transcript MGP_CBAJ_T0067438.1 MGP_CBAJ_G0028450.1 mouse_genomes_project 4 136637544 136659949 + AU040320 protein_coding processed_transcript MGP_CBAJ_T0067439.1 MGP_CBAJ_G0028450.1 mouse_genomes_project 4 136663131 136670732 + AU040320 protein_coding processed_transcript MGP_CBAJ_T0067440.1 MGP_CBAJ_G0028450.1 mouse_genomes_project 4 136681498 136684720 + AU040320 protein_coding processed_transcript MGP_CBAJ_T0065537.1 MGP_CBAJ_G0028019.1 mouse_genomes_project 4 65743574 65763873 - MGP_CBAJ_P0065537 Wdr31 protein_coding protein_coding MGP_CBAJ_T0065538.1 MGP_CBAJ_G0028019.1 mouse_genomes_project 4 65744576 65763873 - MGP_CBAJ_P0065538 Wdr31 protein_coding protein_coding MGP_CBAJ_T0065539.1 MGP_CBAJ_G0028019.1 mouse_genomes_project 4 65744576 65753442 - MGP_CBAJ_P0065539 Wdr31 protein_coding protein_coding MGP_CBAJ_T0065540.1 MGP_CBAJ_G0028019.1 mouse_genomes_project 4 65744576 65763873 - MGP_CBAJ_P0065540 Wdr31 protein_coding protein_coding MGP_CBAJ_T0065541.1 MGP_CBAJ_G0028019.1 mouse_genomes_project 4 65748484 65750217 - Wdr31 protein_coding retained_intron MGP_CBAJ_T0065542.1 MGP_CBAJ_G0028019.1 mouse_genomes_project 4 65749329 65753883 - Wdr31 protein_coding retained_intron MGP_CBAJ_T0065543.1 MGP_CBAJ_G0028019.1 mouse_genomes_project 4 65756377 65763882 - MGP_CBAJ_P0065543 Wdr31 protein_coding protein_coding MGP_CBAJ_T0065544.1 MGP_CBAJ_G0028019.1 mouse_genomes_project 4 65757032 65763860 - MGP_CBAJ_P0065544 Wdr31 protein_coding protein_coding MGP_CBAJ_T0068036.1 MGP_CBAJ_G0028572.1 mouse_genomes_project 4 145031335 145048871 - Cd52 protein_coding processed_transcript MGP_CBAJ_T0068039.1 MGP_CBAJ_G0028572.1 mouse_genomes_project 4 145047365 145048912 - MGP_CBAJ_P0068039 Cd52 protein_coding protein_coding MGP_CBAJ_T0068040.1 MGP_CBAJ_G0028572.1 mouse_genomes_project 4 145047905 145048868 - Cd52 protein_coding processed_transcript MGP_CBAJ_T0064969.1 MGP_CBAJ_G0027875.1 mouse_genomes_project 4 44504040 44515520 - Tpm2 protein_coding processed_transcript MGP_CBAJ_T0064970.1 MGP_CBAJ_G0027875.1 mouse_genomes_project 4 44504040 44515546 - MGP_CBAJ_P0064970 Tpm2 protein_coding protein_coding MGP_CBAJ_T0064971.1 MGP_CBAJ_G0027875.1 mouse_genomes_project 4 44504040 44515677 - MGP_CBAJ_P0064971 Tpm2 protein_coding protein_coding MGP_CBAJ_T0064972.1 MGP_CBAJ_G0027875.1 mouse_genomes_project 4 44504041 44515470 - MGP_CBAJ_P0064972 Tpm2 protein_coding protein_coding MGP_CBAJ_T0064973.1 MGP_CBAJ_G0027875.1 mouse_genomes_project 4 44505011 44511752 - Tpm2 protein_coding processed_transcript MGP_CBAJ_T0064974.1 MGP_CBAJ_G0027875.1 mouse_genomes_project 4 44511750 44515847 - MGP_CBAJ_P0064974 Tpm2 protein_coding protein_coding MGP_CBAJ_T0066772.1 MGP_CBAJ_G0028292.1 mouse_genomes_project 4 125356552 125382698 - MGP_CBAJ_P0066772 Nasp protein_coding protein_coding MGP_CBAJ_T0066773.1 MGP_CBAJ_G0028292.1 mouse_genomes_project 4 125357109 125383142 - MGP_CBAJ_P0066773 Nasp protein_coding protein_coding MGP_CBAJ_T0066774.1 MGP_CBAJ_G0028292.1 mouse_genomes_project 4 125357109 125382679 - MGP_CBAJ_P0066774 Nasp protein_coding protein_coding MGP_CBAJ_T0066775.1 MGP_CBAJ_G0028292.1 mouse_genomes_project 4 125358226 125361749 - Nasp protein_coding processed_transcript MGP_CBAJ_T0066776.1 MGP_CBAJ_G0028292.1 mouse_genomes_project 4 125358292 125360426 - Nasp protein_coding processed_transcript MGP_CBAJ_T0066777.1 MGP_CBAJ_G0028292.1 mouse_genomes_project 4 125366967 125382694 - Nasp protein_coding processed_transcript MGP_CBAJ_T0066778.1 MGP_CBAJ_G0028292.1 mouse_genomes_project 4 125372491 125379136 - Nasp protein_coding processed_transcript MGP_CBAJ_T0066779.1 MGP_CBAJ_G0028292.1 mouse_genomes_project 4 125374093 125382649 - Nasp protein_coding processed_transcript MGP_CBAJ_T0014406.1 MGP_CBAJ_G0012518.1 mouse_genomes_project 4 79606051 79606252 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064404.1 MGP_CBAJ_G0027759.1 mouse_genomes_project 4 18268922 18297368 + MGP_CBAJ_P0064404 Ggh protein_coding protein_coding MGP_CBAJ_T0101117.1 MGP_CBAJ_G0039314.1 mouse_genomes_project 4 45242270 45247806 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101118.1 MGP_CBAJ_G0039314.1 mouse_genomes_project 4 45246919 45247225 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0005538.1 MGP_CBAJ_G0004660.1 mouse_genomes_project 4 116024030 116032908 - Lrp8os3 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_CBAJ_T0007718.1 MGP_CBAJ_G0006301.1 mouse_genomes_project 4 28311959 28335706 + Gm11917 lincRNA lincRNA MGP_CBAJ_T0064227.1 MGP_CBAJ_G0027715.1 mouse_genomes_project 4 5650821 5723469 + Chd7 protein_coding retained_intron MGP_CBAJ_T0064228.1 MGP_CBAJ_G0027715.1 mouse_genomes_project 4 5650885 5756286 + MGP_CBAJ_P0064228 Chd7 protein_coding protein_coding MGP_CBAJ_T0064229.1 MGP_CBAJ_G0027715.1 mouse_genomes_project 4 5651336 5837165 + MGP_CBAJ_P0064229 Chd7 protein_coding protein_coding MGP_CBAJ_T0064230.1 MGP_CBAJ_G0027715.1 mouse_genomes_project 4 5651780 5838013 + MGP_CBAJ_P0064230 Chd7 protein_coding protein_coding MGP_CBAJ_T0064231.1 MGP_CBAJ_G0027715.1 mouse_genomes_project 4 5670785 5719125 + MGP_CBAJ_P0064231 Chd7 protein_coding protein_coding MGP_CBAJ_T0064232.1 MGP_CBAJ_G0027715.1 mouse_genomes_project 4 5719000 5837579 + MGP_CBAJ_P0064232 Chd7 protein_coding protein_coding MGP_CBAJ_T0064233.1 MGP_CBAJ_G0027715.1 mouse_genomes_project 4 5719067 5838010 + MGP_CBAJ_P0064233 Chd7 protein_coding unknown_likely_coding MGP_CBAJ_T0064234.1 MGP_CBAJ_G0027715.1 mouse_genomes_project 4 5810695 5815079 + Chd7 protein_coding processed_transcript MGP_CBAJ_T0065260.1 MGP_CBAJ_G0027937.1 mouse_genomes_project 4 49783810 49845007 + MGP_CBAJ_P0065260 Stx17 protein_coding protein_coding MGP_CBAJ_T0065261.1 MGP_CBAJ_G0027937.1 mouse_genomes_project 4 49783818 49819420 + MGP_CBAJ_P0065261 Stx17 protein_coding protein_coding MGP_CBAJ_T0065262.1 MGP_CBAJ_G0027937.1 mouse_genomes_project 4 49783821 49845603 + MGP_CBAJ_P0065262 Stx17 protein_coding protein_coding MGP_CBAJ_T0065263.1 MGP_CBAJ_G0027937.1 mouse_genomes_project 4 49783830 49841327 + MGP_CBAJ_P0065263 Stx17 protein_coding protein_coding MGP_CBAJ_T0010483.1 MGP_CBAJ_G0008621.1 mouse_genomes_project 4 106902711 106902800 + Gm23366 miRNA miRNA MGP_CBAJ_T0065296.1 MGP_CBAJ_G0027947.1 mouse_genomes_project 4 51384559 51426594 - MGP_CBAJ_P0065296 Baat protein_coding protein_coding MGP_CBAJ_T0065297.1 MGP_CBAJ_G0027947.1 mouse_genomes_project 4 51384957 51423239 - MGP_CBAJ_P0065297 Baat protein_coding protein_coding MGP_CBAJ_T0014262.1 MGP_CBAJ_G0012374.1 mouse_genomes_project 4 22060065 22060980 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001387.1 MGP_CBAJ_G0001312.1 mouse_genomes_project 4 148145712 148148176 + TEC TEC MGP_CBAJ_T0004499.1 MGP_CBAJ_G0003903.1 mouse_genomes_project 4 161727981 161730850 - Gm13054 antisense antisense MGP_CBAJ_T0067964.1 MGP_CBAJ_G0028557.1 mouse_genomes_project 4 144312823 144322082 - MGP_CBAJ_P0067964 Trnp1 protein_coding protein_coding MGP_CBAJ_T0067965.1 MGP_CBAJ_G0028557.1 mouse_genomes_project 4 144312841 144321251 - Trnp1 protein_coding processed_transcript MGP_CBAJ_T0064282.1 MGP_CBAJ_G0027723.1 mouse_genomes_project 4 8447303 8449913 + Ccne2 protein_coding processed_transcript MGP_CBAJ_T0064283.1 MGP_CBAJ_G0027723.1 mouse_genomes_project 4 8447306 8463490 + MGP_CBAJ_P0064283 Ccne2 protein_coding protein_coding MGP_CBAJ_T0064284.1 MGP_CBAJ_G0027723.1 mouse_genomes_project 4 8447661 8451106 + Ccne2 protein_coding processed_transcript MGP_CBAJ_T0064285.1 MGP_CBAJ_G0027723.1 mouse_genomes_project 4 8447678 8463594 + MGP_CBAJ_P0064285 Ccne2 protein_coding protein_coding MGP_CBAJ_T0064286.1 MGP_CBAJ_G0027723.1 mouse_genomes_project 4 8447682 8463497 + MGP_CBAJ_P0064286 Ccne2 protein_coding protein_coding MGP_CBAJ_T0064287.1 MGP_CBAJ_G0027723.1 mouse_genomes_project 4 8447688 8450988 + Ccne2 protein_coding processed_transcript MGP_CBAJ_T0064288.1 MGP_CBAJ_G0027723.1 mouse_genomes_project 4 8448548 8449187 + Ccne2 protein_coding processed_transcript MGP_CBAJ_T0068385.1 MGP_CBAJ_G0028652.1 mouse_genomes_project 4 150086564 150118222 + MGP_CBAJ_P0068385 Hp1bp3 protein_coding protein_coding MGP_CBAJ_T0068386.1 MGP_CBAJ_G0028652.1 mouse_genomes_project 4 150086899 150091981 + Hp1bp3 protein_coding processed_transcript MGP_CBAJ_T0068387.1 MGP_CBAJ_G0028652.1 mouse_genomes_project 4 150086923 150115278 + MGP_CBAJ_P0068387 Hp1bp3 protein_coding protein_coding MGP_CBAJ_T0068388.1 MGP_CBAJ_G0028652.1 mouse_genomes_project 4 150086925 150098692 + MGP_CBAJ_P0068388 Hp1bp3 protein_coding protein_coding MGP_CBAJ_T0068389.1 MGP_CBAJ_G0028652.1 mouse_genomes_project 4 150086926 150116687 + MGP_CBAJ_P0068389 Hp1bp3 protein_coding protein_coding MGP_CBAJ_T0068390.1 MGP_CBAJ_G0028652.1 mouse_genomes_project 4 150086933 150101417 + MGP_CBAJ_P0068390 Hp1bp3 protein_coding protein_coding MGP_CBAJ_T0068391.1 MGP_CBAJ_G0028652.1 mouse_genomes_project 4 150086934 150118222 + MGP_CBAJ_P0068391 Hp1bp3 protein_coding protein_coding MGP_CBAJ_T0068392.1 MGP_CBAJ_G0028652.1 mouse_genomes_project 4 150087426 150102395 + MGP_CBAJ_P0068392 Hp1bp3 protein_coding protein_coding MGP_CBAJ_T0068393.1 MGP_CBAJ_G0028652.1 mouse_genomes_project 4 150087573 150102382 + Hp1bp3 protein_coding retained_intron MGP_CBAJ_T0068394.1 MGP_CBAJ_G0028652.1 mouse_genomes_project 4 150087599 150093860 + MGP_CBAJ_P0068394 Hp1bp3 protein_coding protein_coding MGP_CBAJ_T0068395.1 MGP_CBAJ_G0028652.1 mouse_genomes_project 4 150101224 150114275 + MGP_CBAJ_P0068395 Hp1bp3 protein_coding protein_coding MGP_CBAJ_T0068396.1 MGP_CBAJ_G0028652.1 mouse_genomes_project 4 150102294 150108149 + Hp1bp3 protein_coding processed_transcript MGP_CBAJ_T0069156.1 MGP_CBAJ_G0028846.1 mouse_genomes_project 4 166959765 167022032 - MGP_CBAJ_P0069156 Kcnab2 protein_coding protein_coding MGP_CBAJ_T0069157.1 MGP_CBAJ_G0028846.1 mouse_genomes_project 4 166959767 167054367 - MGP_CBAJ_P0069157 Kcnab2 protein_coding protein_coding MGP_CBAJ_T0069158.1 MGP_CBAJ_G0028846.1 mouse_genomes_project 4 166959768 167054021 - MGP_CBAJ_P0069158 Kcnab2 protein_coding protein_coding MGP_CBAJ_T0069159.1 MGP_CBAJ_G0028846.1 mouse_genomes_project 4 166961744 167053929 - MGP_CBAJ_P0069159 Kcnab2 protein_coding protein_coding MGP_CBAJ_T0069160.1 MGP_CBAJ_G0028846.1 mouse_genomes_project 4 166961805 167022032 - MGP_CBAJ_P0069160 Kcnab2 protein_coding protein_coding MGP_CBAJ_T0069161.1 MGP_CBAJ_G0028846.1 mouse_genomes_project 4 166964011 166995912 - Kcnab2 protein_coding processed_transcript MGP_CBAJ_T0069162.1 MGP_CBAJ_G0028846.1 mouse_genomes_project 4 166973852 167003816 - Kcnab2 protein_coding processed_transcript MGP_CBAJ_T0069163.1 MGP_CBAJ_G0028846.1 mouse_genomes_project 4 166974772 167031543 - MGP_CBAJ_P0069163 Kcnab2 protein_coding protein_coding MGP_CBAJ_T0069164.1 MGP_CBAJ_G0028846.1 mouse_genomes_project 4 166975872 167021933 - Kcnab2 protein_coding processed_transcript MGP_CBAJ_T0069165.1 MGP_CBAJ_G0028846.1 mouse_genomes_project 4 166984675 167054040 - Kcnab2 protein_coding retained_intron MGP_CBAJ_T0069166.1 MGP_CBAJ_G0028846.1 mouse_genomes_project 4 166984829 166999013 - Kcnab2 protein_coding processed_transcript MGP_CBAJ_T0069167.1 MGP_CBAJ_G0028846.1 mouse_genomes_project 4 166985659 166991240 - Kcnab2 protein_coding processed_transcript MGP_CBAJ_T0069168.1 MGP_CBAJ_G0028846.1 mouse_genomes_project 4 166999582 167021933 - Kcnab2 protein_coding processed_transcript MGP_CBAJ_T0069169.1 MGP_CBAJ_G0028846.1 mouse_genomes_project 4 167007954 167053991 - MGP_CBAJ_P0069169 Kcnab2 protein_coding protein_coding MGP_CBAJ_T0014374.1 MGP_CBAJ_G0012486.1 mouse_genomes_project 4 60266210 60268199 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065985.1 MGP_CBAJ_G0028130.1 mouse_genomes_project 4 103566581 103630750 - MGP_CBAJ_P0065985 Gm12695 protein_coding protein_coding MGP_CBAJ_T0065204.1 MGP_CBAJ_G0027922.1 mouse_genomes_project 4 47805506 47818300 - MGP_CBAJ_P0065204 Trmo protein_coding nonsense_mediated_decay MGP_CBAJ_T0065205.1 MGP_CBAJ_G0027922.1 mouse_genomes_project 4 47805980 47818305 - MGP_CBAJ_P0065205 Trmo protein_coding protein_coding MGP_CBAJ_T0065206.1 MGP_CBAJ_G0027922.1 mouse_genomes_project 4 47808870 47818319 - MGP_CBAJ_P0065206 Trmo protein_coding protein_coding MGP_CBAJ_T0014378.1 MGP_CBAJ_G0012490.1 mouse_genomes_project 4 62349979 62350699 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101921.1 MGP_CBAJ_G0039952.1 mouse_genomes_project 4 156218105 156219175 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0069065.1 MGP_CBAJ_G0028829.1 mouse_genomes_project 4 166473595 166482718 - MGP_CBAJ_P0069065 Thap3 protein_coding protein_coding MGP_CBAJ_T0069066.1 MGP_CBAJ_G0028829.1 mouse_genomes_project 4 166473758 166482691 - MGP_CBAJ_P0069066 Thap3 protein_coding protein_coding MGP_CBAJ_T0069067.1 MGP_CBAJ_G0028829.1 mouse_genomes_project 4 166476415 166482701 - Thap3 protein_coding retained_intron MGP_CBAJ_T0007802.1 MGP_CBAJ_G0006373.1 mouse_genomes_project 4 108736115 108737098 + Gm12801 lincRNA lincRNA MGP_CBAJ_T0065129.1 MGP_CBAJ_G0027905.1 mouse_genomes_project 4 46264636 46320268 - MGP_CBAJ_P0065129 Fbxo10 protein_coding protein_coding MGP_CBAJ_T0065130.1 MGP_CBAJ_G0027905.1 mouse_genomes_project 4 46264637 46292394 - MGP_CBAJ_P0065130 Fbxo10 protein_coding protein_coding MGP_CBAJ_T0065131.1 MGP_CBAJ_G0027905.1 mouse_genomes_project 4 46276677 46289008 - Fbxo10 protein_coding processed_transcript MGP_CBAJ_T0010470.1 MGP_CBAJ_G0008608.1 mouse_genomes_project 4 61307142 61307229 - Mir3095 miRNA miRNA MGP_CBAJ_T0069265.1 MGP_CBAJ_G0028865.1 mouse_genomes_project 4 169806587 169810122 - Fam213b protein_coding processed_transcript MGP_CBAJ_T0069266.1 MGP_CBAJ_G0028865.1 mouse_genomes_project 4 169807482 169810194 - MGP_CBAJ_P0069266 Fam213b protein_coding protein_coding MGP_CBAJ_T0069267.1 MGP_CBAJ_G0028865.1 mouse_genomes_project 4 169808418 169810219 - MGP_CBAJ_P0069267 Fam213b protein_coding protein_coding MGP_CBAJ_T0004339.1 MGP_CBAJ_G0003781.1 mouse_genomes_project 4 9398117 9413531 + Gm11842 antisense antisense MGP_CBAJ_T0014605.1 MGP_CBAJ_G0012717.1 mouse_genomes_project 4 156580680 156580936 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014554.1 MGP_CBAJ_G0012666.1 mouse_genomes_project 4 133210404 133210813 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0066127.1 MGP_CBAJ_G0028164.1 mouse_genomes_project 4 109507600 109515689 - MGP_CBAJ_P0066127 Gm12790 protein_coding protein_coding MGP_CBAJ_T0066170.1 MGP_CBAJ_G0028170.1 mouse_genomes_project 4 110841891 110843406 + Mier1 protein_coding processed_transcript MGP_CBAJ_T0066171.1 MGP_CBAJ_G0028170.1 mouse_genomes_project 4 110841932 110858616 + Mier1 protein_coding processed_transcript MGP_CBAJ_T0066172.1 MGP_CBAJ_G0028170.1 mouse_genomes_project 4 110841966 110870893 + Mier1 protein_coding processed_transcript MGP_CBAJ_T0066173.1 MGP_CBAJ_G0028170.1 mouse_genomes_project 4 110842263 110845804 + MGP_CBAJ_P0066173 Mier1 protein_coding protein_coding MGP_CBAJ_T0066174.1 MGP_CBAJ_G0028170.1 mouse_genomes_project 4 110842392 110893668 + MGP_CBAJ_P0066174 Mier1 protein_coding unknown_likely_coding MGP_CBAJ_T0066175.1 MGP_CBAJ_G0028170.1 mouse_genomes_project 4 110842457 110846168 + Mier1 protein_coding processed_transcript MGP_CBAJ_T0066176.1 MGP_CBAJ_G0028170.1 mouse_genomes_project 4 110842773 110854892 + MGP_CBAJ_P0066176 Mier1 protein_coding protein_coding MGP_CBAJ_T0066177.1 MGP_CBAJ_G0028170.1 mouse_genomes_project 4 110843139 110893658 + MGP_CBAJ_P0066177 Mier1 protein_coding protein_coding MGP_CBAJ_T0066178.1 MGP_CBAJ_G0028170.1 mouse_genomes_project 4 110844796 110846092 + Mier1 protein_coding processed_transcript MGP_CBAJ_T0066179.1 MGP_CBAJ_G0028170.1 mouse_genomes_project 4 110846787 110893661 + MGP_CBAJ_P0066179 Mier1 protein_coding protein_coding MGP_CBAJ_T0066180.1 MGP_CBAJ_G0028170.1 mouse_genomes_project 4 110846891 110870273 + Mier1 protein_coding retained_intron MGP_CBAJ_T0066181.1 MGP_CBAJ_G0028170.1 mouse_genomes_project 4 110846911 110872146 + Mier1 protein_coding retained_intron MGP_CBAJ_T0066182.1 MGP_CBAJ_G0028170.1 mouse_genomes_project 4 110870756 110890654 + MGP_CBAJ_P0066182 Mier1 protein_coding protein_coding MGP_CBAJ_T0066183.1 MGP_CBAJ_G0028170.1 mouse_genomes_project 4 110886442 110890723 + Mier1 protein_coding processed_transcript MGP_CBAJ_T0065162.1 MGP_CBAJ_G0027912.1 mouse_genomes_project 4 47128368 47133731 + MGP_CBAJ_P0065162 Aldh1b1 protein_coding protein_coding MGP_CBAJ_T0065163.1 MGP_CBAJ_G0027912.1 mouse_genomes_project 4 47128467 47131985 + MGP_CBAJ_P0065163 Aldh1b1 protein_coding protein_coding MGP_CBAJ_T0010495.1 MGP_CBAJ_G0008633.1 mouse_genomes_project 4 133196598 133196700 + Mir6398 miRNA miRNA MGP_CBAJ_T0069193.1 MGP_CBAJ_G0028852.1 mouse_genomes_project 4 168835767 168845541 + MGP_CBAJ_P0069193 Lrrc47 protein_coding protein_coding MGP_CBAJ_T0069194.1 MGP_CBAJ_G0028852.1 mouse_genomes_project 4 168835839 168845540 + MGP_CBAJ_P0069194 Lrrc47 protein_coding protein_coding MGP_CBAJ_T0069195.1 MGP_CBAJ_G0028852.1 mouse_genomes_project 4 168841454 168843098 + Lrrc47 protein_coding retained_intron MGP_CBAJ_T0069196.1 MGP_CBAJ_G0028852.1 mouse_genomes_project 4 168842980 168844919 + MGP_CBAJ_P0069196 Lrrc47 protein_coding protein_coding MGP_CBAJ_T0069197.1 MGP_CBAJ_G0028852.1 mouse_genomes_project 4 168843666 168844695 + MGP_CBAJ_P0069197 Lrrc47 protein_coding protein_coding MGP_CBAJ_T0064569.1 MGP_CBAJ_G0027797.1 mouse_genomes_project 4 34453412 34517853 - MGP_CBAJ_P0064569 Orc3 protein_coding protein_coding MGP_CBAJ_T0064570.1 MGP_CBAJ_G0027797.1 mouse_genomes_project 4 34453412 34517822 - MGP_CBAJ_P0064570 Orc3 protein_coding protein_coding MGP_CBAJ_T0064571.1 MGP_CBAJ_G0027797.1 mouse_genomes_project 4 34454181 34489660 - Orc3 protein_coding processed_transcript MGP_CBAJ_T0064572.1 MGP_CBAJ_G0027797.1 mouse_genomes_project 4 34455002 34459505 - Orc3 protein_coding processed_transcript MGP_CBAJ_T0064573.1 MGP_CBAJ_G0027797.1 mouse_genomes_project 4 34460251 34517820 - Orc3 protein_coding processed_transcript MGP_CBAJ_T0064574.1 MGP_CBAJ_G0027797.1 mouse_genomes_project 4 34483434 34486097 - Orc3 protein_coding processed_transcript MGP_CBAJ_T0064575.1 MGP_CBAJ_G0027797.1 mouse_genomes_project 4 34483960 34517802 - MGP_CBAJ_P0064575 Orc3 protein_coding protein_coding MGP_CBAJ_T0064576.1 MGP_CBAJ_G0027797.1 mouse_genomes_project 4 34489610 34517812 - Orc3 protein_coding processed_transcript MGP_CBAJ_T0064577.1 MGP_CBAJ_G0027797.1 mouse_genomes_project 4 34489698 34517818 - Orc3 protein_coding processed_transcript MGP_CBAJ_T0064578.1 MGP_CBAJ_G0027797.1 mouse_genomes_project 4 34490284 34517813 - Orc3 protein_coding processed_transcript MGP_CBAJ_T0014308.1 MGP_CBAJ_G0012420.1 mouse_genomes_project 4 34906436 34906778 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099322.1 MGP_CBAJ_G0037577.1 mouse_genomes_project 4 163575241 163575345 - Gm24381 snRNA snRNA MGP_CBAJ_T0014536.1 MGP_CBAJ_G0012648.1 mouse_genomes_project 4 128485215 128486272 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064445.1 MGP_CBAJ_G0027767.1 mouse_genomes_project 4 20300961 20382138 + Faxc protein_coding processed_transcript MGP_CBAJ_T0064446.1 MGP_CBAJ_G0027767.1 mouse_genomes_project 4 20300963 20382743 + MGP_CBAJ_P0064446 Faxc protein_coding protein_coding MGP_CBAJ_T0064447.1 MGP_CBAJ_G0027767.1 mouse_genomes_project 4 20300965 20327851 + Faxc protein_coding processed_transcript MGP_CBAJ_T0064448.1 MGP_CBAJ_G0027767.1 mouse_genomes_project 4 20300989 20384831 + Faxc protein_coding processed_transcript MGP_CBAJ_T0064449.1 MGP_CBAJ_G0027767.1 mouse_genomes_project 4 20335385 20337737 + Faxc protein_coding processed_transcript MGP_CBAJ_T0066449.1 MGP_CBAJ_G0028223.1 mouse_genomes_project 4 117017721 117031907 + MGP_CBAJ_P0066449 Cc2d1b protein_coding protein_coding MGP_CBAJ_T0066450.1 MGP_CBAJ_G0028223.1 mouse_genomes_project 4 117021293 117023788 + MGP_CBAJ_P0066450 Cc2d1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0066451.1 MGP_CBAJ_G0028223.1 mouse_genomes_project 4 117021344 117031907 + MGP_CBAJ_P0066451 Cc2d1b protein_coding protein_coding MGP_CBAJ_T0066452.1 MGP_CBAJ_G0028223.1 mouse_genomes_project 4 117023536 117024544 + Cc2d1b protein_coding retained_intron MGP_CBAJ_T0066453.1 MGP_CBAJ_G0028223.1 mouse_genomes_project 4 117023801 117024885 + Cc2d1b protein_coding retained_intron MGP_CBAJ_T0066454.1 MGP_CBAJ_G0028223.1 mouse_genomes_project 4 117023829 117031889 + Cc2d1b protein_coding retained_intron MGP_CBAJ_T0066455.1 MGP_CBAJ_G0028223.1 mouse_genomes_project 4 117027371 117028184 + Cc2d1b protein_coding retained_intron MGP_CBAJ_T0066456.1 MGP_CBAJ_G0028223.1 mouse_genomes_project 4 117027405 117028215 + Cc2d1b protein_coding processed_transcript MGP_CBAJ_T0066457.1 MGP_CBAJ_G0028223.1 mouse_genomes_project 4 117028231 117031047 + Cc2d1b protein_coding retained_intron MGP_CBAJ_T0014343.1 MGP_CBAJ_G0012455.1 mouse_genomes_project 4 49030746 49034371 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004412.1 MGP_CBAJ_G0003837.1 mouse_genomes_project 4 116036874 116053859 - Lrp8os2 antisense antisense MGP_CBAJ_T0004413.1 MGP_CBAJ_G0003837.1 mouse_genomes_project 4 116036874 116041837 - Lrp8os2 antisense antisense MGP_CBAJ_T0004414.1 MGP_CBAJ_G0003837.1 mouse_genomes_project 4 116038833 116053811 - Lrp8os2 antisense antisense MGP_CBAJ_T0004415.1 MGP_CBAJ_G0003837.1 mouse_genomes_project 4 116041696 116053847 - Lrp8os2 antisense antisense MGP_CBAJ_T0099261.1 MGP_CBAJ_G0037516.1 mouse_genomes_project 4 51364032 51364136 + Gm26424 snRNA snRNA MGP_CBAJ_T0014421.1 MGP_CBAJ_G0012533.1 mouse_genomes_project 4 85077116 85077519 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101901.1 MGP_CBAJ_G0039932.1 mouse_genomes_project 4 109410855 109411128 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0014348.1 MGP_CBAJ_G0012460.1 mouse_genomes_project 4 51671358 51671874 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010532.1 MGP_CBAJ_G0008670.1 mouse_genomes_project 4 171150119 171150202 - Mir429 miRNA miRNA MGP_CBAJ_T0010522.1 MGP_CBAJ_G0008660.1 mouse_genomes_project 4 152940129 152940225 + Gm23045 miRNA miRNA MGP_CBAJ_T0069515.1 MGP_CBAJ_G0028911.1 mouse_genomes_project 4 171277342 171281139 - Agrn protein_coding retained_intron MGP_CBAJ_T0069516.1 MGP_CBAJ_G0028911.1 mouse_genomes_project 4 171277342 171301625 - MGP_CBAJ_P0069516 Agrn protein_coding protein_coding MGP_CBAJ_T0069517.1 MGP_CBAJ_G0028911.1 mouse_genomes_project 4 171277342 171301625 - MGP_CBAJ_P0069517 Agrn protein_coding protein_coding MGP_CBAJ_T0069518.1 MGP_CBAJ_G0028911.1 mouse_genomes_project 4 171277342 171301625 - MGP_CBAJ_P0069518 Agrn protein_coding protein_coding MGP_CBAJ_T0069519.1 MGP_CBAJ_G0028911.1 mouse_genomes_project 4 171277346 171301831 - Agrn protein_coding retained_intron MGP_CBAJ_T0069520.1 MGP_CBAJ_G0028911.1 mouse_genomes_project 4 171277830 171313208 - MGP_CBAJ_P0069520 Agrn protein_coding protein_coding MGP_CBAJ_T0069521.1 MGP_CBAJ_G0028911.1 mouse_genomes_project 4 171284347 171285779 - Agrn protein_coding processed_transcript MGP_CBAJ_T0014625.1 MGP_CBAJ_G0012737.1 mouse_genomes_project 4 170521357 170521748 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014327.1 MGP_CBAJ_G0012439.1 mouse_genomes_project 4 41885462 41885796 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0069255.1 MGP_CBAJ_G0028862.1 mouse_genomes_project 4 169575160 169576595 - MGP_CBAJ_P0069255 Actrt2 protein_coding protein_coding MGP_CBAJ_T0067718.1 MGP_CBAJ_G0028505.1 mouse_genomes_project 4 140516177 140545042 + MGP_CBAJ_P0067718 Pef1 protein_coding protein_coding MGP_CBAJ_T0067719.1 MGP_CBAJ_G0028505.1 mouse_genomes_project 4 140524517 140545041 + MGP_CBAJ_P0067719 Pef1 protein_coding protein_coding MGP_CBAJ_T0068258.1 MGP_CBAJ_G0028622.1 mouse_genomes_project 4 147518466 147520364 + MGP_CBAJ_P0068258 Id3 protein_coding protein_coding MGP_CBAJ_T0068259.1 MGP_CBAJ_G0028622.1 mouse_genomes_project 4 147518832 147519688 + Id3 protein_coding retained_intron MGP_CBAJ_T0068260.1 MGP_CBAJ_G0028622.1 mouse_genomes_project 4 147519945 147520727 + Id3 protein_coding processed_transcript MGP_CBAJ_T0101917.1 MGP_CBAJ_G0039948.1 mouse_genomes_project 4 132115169 132132950 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010499.1 MGP_CBAJ_G0008637.1 mouse_genomes_project 4 139434209 139434291 - Gm22994 miRNA miRNA MGP_CBAJ_T0065227.1 MGP_CBAJ_G0027929.1 mouse_genomes_project 4 48136145 48495901 - MGP_CBAJ_P0065227 Gabbr2 protein_coding protein_coding MGP_CBAJ_T0065228.1 MGP_CBAJ_G0027929.1 mouse_genomes_project 4 48138342 48166633 - Gabbr2 protein_coding processed_transcript MGP_CBAJ_T0065229.1 MGP_CBAJ_G0027929.1 mouse_genomes_project 4 48155647 48203203 - MGP_CBAJ_P0065229 Gabbr2 protein_coding protein_coding MGP_CBAJ_T0065230.1 MGP_CBAJ_G0027929.1 mouse_genomes_project 4 48294899 48355903 - Gabbr2 protein_coding processed_transcript MGP_CBAJ_T0014599.1 MGP_CBAJ_G0012711.1 mouse_genomes_project 4 155927637 155928096 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014269.1 MGP_CBAJ_G0012381.1 mouse_genomes_project 4 24269340 24273342 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014423.1 MGP_CBAJ_G0012535.1 mouse_genomes_project 4 85222189 85222690 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100596.1 MGP_CBAJ_G0038851.1 mouse_genomes_project 4 168969508 168969652 + Gm26036 snoRNA snoRNA MGP_CBAJ_T0014481.1 MGP_CBAJ_G0012593.1 mouse_genomes_project 4 109429343 109430362 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065515.1 MGP_CBAJ_G0028010.1 mouse_genomes_project 4 65136117 65391792 - MGP_CBAJ_P0065515 protein_coding protein_coding MGP_CBAJ_T0007714.1 MGP_CBAJ_G0006297.1 mouse_genomes_project 4 21753220 21902810 + Gm11884 lincRNA lincRNA MGP_CBAJ_T0065038.1 MGP_CBAJ_G0027891.1 mouse_genomes_project 4 44900571 44903582 - MGP_CBAJ_P0065038 Olfr157 protein_coding protein_coding MGP_CBAJ_T0007892.1 MGP_CBAJ_G0006433.1 mouse_genomes_project 4 146278288 146280515 - Gm16225 lincRNA lincRNA MGP_CBAJ_T0064189.1 MGP_CBAJ_G0027706.1 mouse_genomes_project 4 1357760 1401560 - MGP_CBAJ_P0064189 Impad1 protein_coding protein_coding MGP_CBAJ_T0004520.1 MGP_CBAJ_G0003919.1 mouse_genomes_project 4 166983632 166984095 + Gm16333 antisense antisense MGP_CBAJ_T0067380.1 MGP_CBAJ_G0028437.1 mouse_genomes_project 4 135993549 136004200 - MGP_CBAJ_P0067380 Map7d1 protein_coding protein_coding MGP_CBAJ_T0067381.1 MGP_CBAJ_G0028437.1 mouse_genomes_project 4 135993549 136021662 - MGP_CBAJ_P0067381 Map7d1 protein_coding protein_coding MGP_CBAJ_T0067382.1 MGP_CBAJ_G0028437.1 mouse_genomes_project 4 135993549 136021668 - MGP_CBAJ_P0067382 Map7d1 protein_coding protein_coding MGP_CBAJ_T0067383.1 MGP_CBAJ_G0028437.1 mouse_genomes_project 4 135993549 136021728 - MGP_CBAJ_P0067383 Map7d1 protein_coding protein_coding MGP_CBAJ_T0067384.1 MGP_CBAJ_G0028437.1 mouse_genomes_project 4 135994345 135994931 - Map7d1 protein_coding retained_intron MGP_CBAJ_T0067385.1 MGP_CBAJ_G0028437.1 mouse_genomes_project 4 135995002 135996159 - Map7d1 protein_coding retained_intron MGP_CBAJ_T0017827.1 MGP_CBAJ_G0015313.1 mouse_genomes_project 4 128061784 128090497 + Gm12861 processed_transcript processed_transcript MGP_CBAJ_T0004384.1 MGP_CBAJ_G0003819.1 mouse_genomes_project 4 88921523 88933839 - Gm11413 antisense antisense MGP_CBAJ_T0065800.1 MGP_CBAJ_G0028074.1 mouse_genomes_project 4 91821959 91858040 + Adamtsl1 protein_coding retained_intron MGP_CBAJ_T0065801.1 MGP_CBAJ_G0028074.1 mouse_genomes_project 4 91821959 92236825 + MGP_CBAJ_P0065801 Adamtsl1 protein_coding protein_coding MGP_CBAJ_T0065802.1 MGP_CBAJ_G0028074.1 mouse_genomes_project 4 91821967 92048042 + MGP_CBAJ_P0065802 Adamtsl1 protein_coding protein_coding MGP_CBAJ_T0065803.1 MGP_CBAJ_G0028074.1 mouse_genomes_project 4 91821972 92236828 + MGP_CBAJ_P0065803 Adamtsl1 protein_coding protein_coding MGP_CBAJ_T0065804.1 MGP_CBAJ_G0028074.1 mouse_genomes_project 4 91822019 91984747 + MGP_CBAJ_P0065804 Adamtsl1 protein_coding protein_coding MGP_CBAJ_T0065805.1 MGP_CBAJ_G0028074.1 mouse_genomes_project 4 91822064 92026883 + Adamtsl1 protein_coding retained_intron MGP_CBAJ_T0065806.1 MGP_CBAJ_G0028074.1 mouse_genomes_project 4 91857877 91883389 + Adamtsl1 protein_coding retained_intron MGP_CBAJ_T0065807.1 MGP_CBAJ_G0028074.1 mouse_genomes_project 4 91984368 92043149 + MGP_CBAJ_P0065807 Adamtsl1 protein_coding protein_coding MGP_CBAJ_T0065808.1 MGP_CBAJ_G0028074.1 mouse_genomes_project 4 92074401 92075015 + Adamtsl1 protein_coding processed_transcript MGP_CBAJ_T0065809.1 MGP_CBAJ_G0028074.1 mouse_genomes_project 4 92074678 92236825 + Adamtsl1 protein_coding retained_intron MGP_CBAJ_T0100579.1 MGP_CBAJ_G0038834.1 mouse_genomes_project 4 136692141 136692274 - Gm25604 snoRNA snoRNA MGP_CBAJ_T0099293.1 MGP_CBAJ_G0037548.1 mouse_genomes_project 4 126075275 126075391 + Gm25099 snRNA snRNA MGP_CBAJ_T0014470.1 MGP_CBAJ_G0012582.1 mouse_genomes_project 4 106625205 106625602 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068408.1 MGP_CBAJ_G0028656.1 mouse_genomes_project 4 150209524 150212537 - MGP_CBAJ_P0068408 Pink1 protein_coding protein_coding MGP_CBAJ_T0068409.1 MGP_CBAJ_G0028656.1 mouse_genomes_project 4 150209527 150227931 - MGP_CBAJ_P0068409 Pink1 protein_coding protein_coding MGP_CBAJ_T0068410.1 MGP_CBAJ_G0028656.1 mouse_genomes_project 4 150210037 150227864 - MGP_CBAJ_P0068410 Pink1 protein_coding protein_coding MGP_CBAJ_T0010455.1 MGP_CBAJ_G0008593.1 mouse_genomes_project 4 30194937 30195046 - Gm22831 miRNA miRNA MGP_CBAJ_T0068216.1 MGP_CBAJ_G0028614.1 mouse_genomes_project 4 147227547 147256135 + MGP_CBAJ_P0068216 Cnr2 protein_coding protein_coding MGP_CBAJ_T0068217.1 MGP_CBAJ_G0028614.1 mouse_genomes_project 4 147247743 147256135 + MGP_CBAJ_P0068217 Cnr2 protein_coding protein_coding MGP_CBAJ_T0001366.1 MGP_CBAJ_G0001292.1 mouse_genomes_project 4 3128511 3128786 + TEC TEC MGP_CBAJ_T0065458.1 MGP_CBAJ_G0027993.1 mouse_genomes_project 4 61730171 61851414 - MGP_CBAJ_P0065458 AI314180 protein_coding protein_coding MGP_CBAJ_T0065459.1 MGP_CBAJ_G0027993.1 mouse_genomes_project 4 61742563 61743785 - AI314180 protein_coding processed_transcript MGP_CBAJ_T0065460.1 MGP_CBAJ_G0027993.1 mouse_genomes_project 4 61743369 61850607 - MGP_CBAJ_P0065460 AI314180 protein_coding protein_coding MGP_CBAJ_T0065461.1 MGP_CBAJ_G0027993.1 mouse_genomes_project 4 61747240 61753130 - AI314180 protein_coding processed_transcript MGP_CBAJ_T0065462.1 MGP_CBAJ_G0027993.1 mouse_genomes_project 4 61752880 61767583 - AI314180 protein_coding processed_transcript MGP_CBAJ_T0065463.1 MGP_CBAJ_G0027993.1 mouse_genomes_project 4 61764061 61850604 - MGP_CBAJ_P0065463 AI314180 protein_coding protein_coding MGP_CBAJ_T0065464.1 MGP_CBAJ_G0027993.1 mouse_genomes_project 4 61766220 61768432 - AI314180 protein_coding processed_transcript MGP_CBAJ_T0065465.1 MGP_CBAJ_G0027993.1 mouse_genomes_project 4 61769611 61778468 - AI314180 protein_coding processed_transcript MGP_CBAJ_T0065466.1 MGP_CBAJ_G0027993.1 mouse_genomes_project 4 61777719 61851369 - MGP_CBAJ_P0065466 AI314180 protein_coding protein_coding MGP_CBAJ_T0065467.1 MGP_CBAJ_G0027993.1 mouse_genomes_project 4 61795452 61851414 - MGP_CBAJ_P0065467 AI314180 protein_coding protein_coding MGP_CBAJ_T0065468.1 MGP_CBAJ_G0027993.1 mouse_genomes_project 4 61804025 61850579 - MGP_CBAJ_P0065468 AI314180 protein_coding protein_coding MGP_CBAJ_T0007872.1 MGP_CBAJ_G0006421.1 mouse_genomes_project 4 141353671 141380483 + Gm12973 lincRNA lincRNA MGP_CBAJ_T0007704.1 MGP_CBAJ_G0006288.1 mouse_genomes_project 4 9680910 9726762 + Gm11846 lincRNA lincRNA MGP_CBAJ_T0007861.1 MGP_CBAJ_G0006415.1 mouse_genomes_project 4 139413494 139416526 + Gm12976 lincRNA lincRNA MGP_CBAJ_T0007862.1 MGP_CBAJ_G0006415.1 mouse_genomes_project 4 139415259 139416526 + Gm12976 lincRNA lincRNA MGP_CBAJ_T0017791.1 MGP_CBAJ_G0015288.1 mouse_genomes_project 4 47990613 47994488 + Gm16731 processed_transcript processed_transcript MGP_CBAJ_T0066465.1 MGP_CBAJ_G0028227.1 mouse_genomes_project 4 117251204 117277895 + MGP_CBAJ_P0066465 Txndc12 protein_coding protein_coding MGP_CBAJ_T0066466.1 MGP_CBAJ_G0028227.1 mouse_genomes_project 4 117251238 117262972 + Txndc12 protein_coding processed_transcript MGP_CBAJ_T0066469.1 MGP_CBAJ_G0028227.1 mouse_genomes_project 4 117273254 117275051 + Txndc12 protein_coding processed_transcript MGP_CBAJ_T0068715.1 MGP_CBAJ_G0028743.1 mouse_genomes_project 4 157136214 157141010 - MGP_CBAJ_P0068715 Gm13088 protein_coding protein_coding MGP_CBAJ_T0067468.1 MGP_CBAJ_G0028455.1 mouse_genomes_project 4 137016040 137021960 + MGP_CBAJ_P0067468 Tmem35b protein_coding protein_coding MGP_CBAJ_T0067469.1 MGP_CBAJ_G0028455.1 mouse_genomes_project 4 137018378 137021960 + MGP_CBAJ_P0067469 Tmem35b protein_coding protein_coding MGP_CBAJ_T0101885.1 MGP_CBAJ_G0039916.1 mouse_genomes_project 4 51154210 51178420 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0004445.1 MGP_CBAJ_G0003861.1 mouse_genomes_project 4 133523096 133535269 - Gm12905 antisense antisense MGP_CBAJ_T0004446.1 MGP_CBAJ_G0003861.1 mouse_genomes_project 4 133523264 133523543 - Gm12905 antisense antisense MGP_CBAJ_T0067893.1 MGP_CBAJ_G0028539.1 mouse_genomes_project 4 143358207 143366078 - MGP_CBAJ_P0067893 Xkr8 protein_coding protein_coding MGP_CBAJ_T0067894.1 MGP_CBAJ_G0028539.1 mouse_genomes_project 4 143362039 143366060 - Xkr8 protein_coding processed_transcript MGP_CBAJ_T0067895.1 MGP_CBAJ_G0028539.1 mouse_genomes_project 4 143364435 143366015 - Xkr8 protein_coding processed_transcript MGP_CBAJ_T0017805.1 MGP_CBAJ_G0015297.1 mouse_genomes_project 4 95583790 95609963 + Gm12609 processed_transcript processed_transcript MGP_CBAJ_T0010461.1 MGP_CBAJ_G0008599.1 mouse_genomes_project 4 41715187 41715251 + Mir3094 miRNA miRNA MGP_CBAJ_T0014477.1 MGP_CBAJ_G0012589.1 mouse_genomes_project 4 108793909 108794201 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014507.1 MGP_CBAJ_G0012619.1 mouse_genomes_project 4 119117894 119118162 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0069241.1 MGP_CBAJ_G0028860.1 mouse_genomes_project 4 169183164 169536278 - Prdm16 protein_coding processed_transcript MGP_CBAJ_T0069242.1 MGP_CBAJ_G0028860.1 mouse_genomes_project 4 169183164 169536278 - MGP_CBAJ_P0069242 Prdm16 protein_coding protein_coding MGP_CBAJ_T0069243.1 MGP_CBAJ_G0028860.1 mouse_genomes_project 4 169183164 169536278 - MGP_CBAJ_P0069243 Prdm16 protein_coding protein_coding MGP_CBAJ_T0069244.1 MGP_CBAJ_G0028860.1 mouse_genomes_project 4 169183164 169536278 - MGP_CBAJ_P0069244 Prdm16 protein_coding protein_coding MGP_CBAJ_T0069245.1 MGP_CBAJ_G0028860.1 mouse_genomes_project 4 169183164 169536278 - MGP_CBAJ_P0069245 Prdm16 protein_coding protein_coding MGP_CBAJ_T0069246.1 MGP_CBAJ_G0028860.1 mouse_genomes_project 4 169183164 169536278 - MGP_CBAJ_P0069246 Prdm16 protein_coding protein_coding MGP_CBAJ_T0069247.1 MGP_CBAJ_G0028860.1 mouse_genomes_project 4 169183164 169536278 - MGP_CBAJ_P0069247 Prdm16 protein_coding protein_coding MGP_CBAJ_T0069248.1 MGP_CBAJ_G0028860.1 mouse_genomes_project 4 169190363 169201882 - Prdm16 protein_coding processed_transcript MGP_CBAJ_T0069249.1 MGP_CBAJ_G0028860.1 mouse_genomes_project 4 169195274 169201952 - Prdm16 protein_coding processed_transcript MGP_CBAJ_T0069251.1 MGP_CBAJ_G0028860.1 mouse_genomes_project 4 169213150 169215469 - Prdm16 protein_coding processed_transcript MGP_CBAJ_T0069252.1 MGP_CBAJ_G0028860.1 mouse_genomes_project 4 169223071 169536285 - MGP_CBAJ_P0069252 Prdm16 protein_coding protein_coding MGP_CBAJ_T0069253.1 MGP_CBAJ_G0028860.1 mouse_genomes_project 4 169358491 169416989 - Prdm16 protein_coding processed_transcript MGP_CBAJ_T0069254.1 MGP_CBAJ_G0028860.1 mouse_genomes_project 4 169358522 169536209 - Prdm16 protein_coding processed_transcript MGP_CBAJ_T0014224.1 MGP_CBAJ_G0012336.1 mouse_genomes_project 4 11965329 11965770 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014471.1 MGP_CBAJ_G0012583.1 mouse_genomes_project 4 106643468 106644467 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101893.1 MGP_CBAJ_G0039924.1 mouse_genomes_project 4 94729420 94729987 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0014328.1 MGP_CBAJ_G0012440.1 mouse_genomes_project 4 41935496 41938564 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100584.1 MGP_CBAJ_G0038839.1 mouse_genomes_project 4 141626635 141626769 + Gm25261 snoRNA snoRNA MGP_CBAJ_T0014487.1 MGP_CBAJ_G0012599.1 mouse_genomes_project 4 113331956 113332449 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0068755.1 MGP_CBAJ_G0028767.1 mouse_genomes_project 4 158445725 158484946 - MGP_CBAJ_P0068755 Tnfrsf1b protein_coding protein_coding MGP_CBAJ_T0068756.1 MGP_CBAJ_G0028767.1 mouse_genomes_project 4 158457612 158484946 - MGP_CBAJ_P0068756 Tnfrsf1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0014335.1 MGP_CBAJ_G0012447.1 mouse_genomes_project 4 46950859 46951175 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101919.1 MGP_CBAJ_G0039950.1 mouse_genomes_project 4 132219907 132239055 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0068397.1 MGP_CBAJ_G0028653.1 mouse_genomes_project 4 150129851 150135153 + Sh2d5 protein_coding processed_transcript MGP_CBAJ_T0068398.1 MGP_CBAJ_G0028653.1 mouse_genomes_project 4 150129851 150140783 + MGP_CBAJ_P0068398 Sh2d5 protein_coding protein_coding MGP_CBAJ_T0068399.1 MGP_CBAJ_G0028653.1 mouse_genomes_project 4 150129851 150136743 + MGP_CBAJ_P0068399 Sh2d5 protein_coding protein_coding MGP_CBAJ_T0068401.1 MGP_CBAJ_G0028653.1 mouse_genomes_project 4 150129886 150140783 + MGP_CBAJ_P0068401 Sh2d5 protein_coding protein_coding MGP_CBAJ_T0068402.1 MGP_CBAJ_G0028653.1 mouse_genomes_project 4 150136199 150138562 + Sh2d5 protein_coding retained_intron MGP_CBAJ_T0017776.1 MGP_CBAJ_G0015278.1 mouse_genomes_project 4 16462518 16996318 + processed_transcript processed_transcript MGP_CBAJ_T0007847.1 MGP_CBAJ_G0006406.1 mouse_genomes_project 4 135635697 135646809 - 2610028E06Rik lincRNA lincRNA MGP_CBAJ_T0007848.1 MGP_CBAJ_G0006406.1 mouse_genomes_project 4 135635697 135670090 - 2610028E06Rik lincRNA lincRNA MGP_CBAJ_T0007849.1 MGP_CBAJ_G0006406.1 mouse_genomes_project 4 135636043 135670197 - 2610028E06Rik lincRNA lincRNA MGP_CBAJ_T0007850.1 MGP_CBAJ_G0006406.1 mouse_genomes_project 4 135638261 135664911 - 2610028E06Rik lincRNA lincRNA MGP_CBAJ_T0007851.1 MGP_CBAJ_G0006406.1 mouse_genomes_project 4 135666333 135670197 - 2610028E06Rik lincRNA lincRNA MGP_CBAJ_T0011451.1 MGP_CBAJ_G0009589.1 mouse_genomes_project 4 120728751 120729077 - Gm25844 misc_RNA misc_RNA MGP_CBAJ_T0065146.1 MGP_CBAJ_G0027909.1 mouse_genomes_project 4 46619023 46660365 + MGP_CBAJ_P0065146 Dcaf10 protein_coding protein_coding MGP_CBAJ_T0065147.1 MGP_CBAJ_G0027909.1 mouse_genomes_project 4 46619042 46651086 + Dcaf10 protein_coding processed_transcript MGP_CBAJ_T0065148.1 MGP_CBAJ_G0027909.1 mouse_genomes_project 4 46619104 46655562 + Dcaf10 protein_coding processed_transcript MGP_CBAJ_T0065149.1 MGP_CBAJ_G0027909.1 mouse_genomes_project 4 46650952 46656273 + MGP_CBAJ_P0065149 Dcaf10 protein_coding protein_coding MGP_CBAJ_T0067958.1 MGP_CBAJ_G0028555.1 mouse_genomes_project 4 144154459 144219864 + MGP_CBAJ_P0067958 Slc9a1 protein_coding protein_coding MGP_CBAJ_T0067959.1 MGP_CBAJ_G0028555.1 mouse_genomes_project 4 144155397 144208457 + Slc9a1 protein_coding processed_transcript MGP_CBAJ_T0067960.1 MGP_CBAJ_G0028555.1 mouse_genomes_project 4 144212629 144216740 + Slc9a1 protein_coding processed_transcript MGP_CBAJ_T0067961.1 MGP_CBAJ_G0028555.1 mouse_genomes_project 4 144215671 144216356 + Slc9a1 protein_coding processed_transcript MGP_CBAJ_T0067962.1 MGP_CBAJ_G0028555.1 mouse_genomes_project 4 144216162 144218505 + Slc9a1 protein_coding processed_transcript MGP_CBAJ_T0064755.1 MGP_CBAJ_G0027842.1 mouse_genomes_project 4 42570711 42573577 - MGP_CBAJ_P0064755 Sigmar1 protein_coding protein_coding MGP_CBAJ_T0064756.1 MGP_CBAJ_G0027842.1 mouse_genomes_project 4 42570711 42573577 - MGP_CBAJ_P0064756 Sigmar1 protein_coding protein_coding MGP_CBAJ_T0064757.1 MGP_CBAJ_G0027842.1 mouse_genomes_project 4 42571318 42577295 - Sigmar1 protein_coding processed_transcript MGP_CBAJ_T0064758.1 MGP_CBAJ_G0027842.1 mouse_genomes_project 4 42571723 42590140 - Sigmar1 protein_coding processed_transcript MGP_CBAJ_T0064759.1 MGP_CBAJ_G0027842.1 mouse_genomes_project 4 42572666 42573404 - Sigmar1 protein_coding retained_intron MGP_CBAJ_T0064760.1 MGP_CBAJ_G0027842.1 mouse_genomes_project 4 42572798 42573266 - Sigmar1 protein_coding retained_intron MGP_CBAJ_T0064761.1 MGP_CBAJ_G0027842.1 mouse_genomes_project 4 42572820 42573538 - Sigmar1 protein_coding processed_transcript MGP_CBAJ_T0064762.1 MGP_CBAJ_G0027842.1 mouse_genomes_project 4 42589568 42590898 - Sigmar1 protein_coding processed_transcript MGP_CBAJ_T0014509.1 MGP_CBAJ_G0012621.1 mouse_genomes_project 4 119989939 119990987 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007798.1 MGP_CBAJ_G0006369.1 mouse_genomes_project 4 106304411 106321403 - Gm12681 lincRNA lincRNA MGP_CBAJ_T0014261.1 MGP_CBAJ_G0012373.1 mouse_genomes_project 4 22017439 22018640 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001372.1 MGP_CBAJ_G0001298.1 mouse_genomes_project 4 45851558 45853126 + TEC TEC MGP_CBAJ_T0066125.1 MGP_CBAJ_G0028162.1 mouse_genomes_project 4 109440517 109445520 + MGP_CBAJ_P0066125 protein_coding protein_coding MGP_CBAJ_T0069198.1 MGP_CBAJ_G0028853.1 mouse_genomes_project 4 168844497 168849644 - MGP_CBAJ_P0069198 Smim1 protein_coding protein_coding MGP_CBAJ_T0069199.1 MGP_CBAJ_G0028853.1 mouse_genomes_project 4 168844615 168849940 - MGP_CBAJ_P0069199 Smim1 protein_coding protein_coding MGP_CBAJ_T0069200.1 MGP_CBAJ_G0028853.1 mouse_genomes_project 4 168844615 168849994 - MGP_CBAJ_P0069200 Smim1 protein_coding protein_coding MGP_CBAJ_T0069201.1 MGP_CBAJ_G0028853.1 mouse_genomes_project 4 168845483 168850258 - MGP_CBAJ_P0069201 Smim1 protein_coding protein_coding MGP_CBAJ_T0069202.1 MGP_CBAJ_G0028853.1 mouse_genomes_project 4 168845488 168850180 - MGP_CBAJ_P0069202 Smim1 protein_coding protein_coding MGP_CBAJ_T0069203.1 MGP_CBAJ_G0028853.1 mouse_genomes_project 4 168847337 168849964 - MGP_CBAJ_P0069203 Smim1 protein_coding protein_coding MGP_CBAJ_T0069204.1 MGP_CBAJ_G0028853.1 mouse_genomes_project 4 168847337 168849895 - MGP_CBAJ_P0069204 Smim1 protein_coding protein_coding MGP_CBAJ_T0069205.1 MGP_CBAJ_G0028853.1 mouse_genomes_project 4 168847337 168849644 - MGP_CBAJ_P0069205 Smim1 protein_coding protein_coding MGP_CBAJ_T0069206.1 MGP_CBAJ_G0028853.1 mouse_genomes_project 4 168847338 168848383 - MGP_CBAJ_P0069206 Smim1 protein_coding protein_coding MGP_CBAJ_T0069207.1 MGP_CBAJ_G0028853.1 mouse_genomes_project 4 168847338 168850178 - MGP_CBAJ_P0069207 Smim1 protein_coding protein_coding MGP_CBAJ_T0069208.1 MGP_CBAJ_G0028853.1 mouse_genomes_project 4 168847608 168850065 - MGP_CBAJ_P0069208 Smim1 protein_coding protein_coding MGP_CBAJ_T0069209.1 MGP_CBAJ_G0028853.1 mouse_genomes_project 4 168847726 168849691 - MGP_CBAJ_P0069209 Smim1 protein_coding protein_coding MGP_CBAJ_T0069210.1 MGP_CBAJ_G0028853.1 mouse_genomes_project 4 168847751 168848351 - MGP_CBAJ_P0069210 Smim1 protein_coding protein_coding MGP_CBAJ_T0069211.1 MGP_CBAJ_G0028853.1 mouse_genomes_project 4 168849333 168849940 - Smim1 protein_coding processed_transcript MGP_CBAJ_T0017814.1 MGP_CBAJ_G0015304.1 mouse_genomes_project 4 104698387 104703813 - processed_transcript processed_transcript MGP_CBAJ_T0066142.1 MGP_CBAJ_G0028166.1 mouse_genomes_project 4 110416193 110559973 + Sgip1 protein_coding retained_intron MGP_CBAJ_T0066143.1 MGP_CBAJ_G0028166.1 mouse_genomes_project 4 110436998 110668862 + MGP_CBAJ_P0066143 Sgip1 protein_coding protein_coding MGP_CBAJ_T0066144.1 MGP_CBAJ_G0028166.1 mouse_genomes_project 4 110437191 110552868 + Sgip1 protein_coding processed_transcript MGP_CBAJ_T0066145.1 MGP_CBAJ_G0028166.1 mouse_genomes_project 4 110437208 110668743 + MGP_CBAJ_P0066145 Sgip1 protein_coding protein_coding MGP_CBAJ_T0066146.1 MGP_CBAJ_G0028166.1 mouse_genomes_project 4 110437215 110558956 + MGP_CBAJ_P0066146 Sgip1 protein_coding protein_coding MGP_CBAJ_T0066147.1 MGP_CBAJ_G0028166.1 mouse_genomes_project 4 110437218 110550305 + Sgip1 protein_coding processed_transcript MGP_CBAJ_T0066148.1 MGP_CBAJ_G0028166.1 mouse_genomes_project 4 110437226 110668057 + MGP_CBAJ_P0066148 Sgip1 protein_coding protein_coding MGP_CBAJ_T0066149.1 MGP_CBAJ_G0028166.1 mouse_genomes_project 4 110437238 110559269 + Sgip1 protein_coding processed_transcript MGP_CBAJ_T0066150.1 MGP_CBAJ_G0028166.1 mouse_genomes_project 4 110437328 110611253 + MGP_CBAJ_P0066150 Sgip1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066151.1 MGP_CBAJ_G0028166.1 mouse_genomes_project 4 110437388 110670499 + MGP_CBAJ_P0066151 Sgip1 protein_coding protein_coding MGP_CBAJ_T0066152.1 MGP_CBAJ_G0028166.1 mouse_genomes_project 4 110559710 110667483 + MGP_CBAJ_P0066152 Sgip1 protein_coding protein_coding MGP_CBAJ_T0066153.1 MGP_CBAJ_G0028166.1 mouse_genomes_project 4 110613428 110620919 + Sgip1 protein_coding processed_transcript MGP_CBAJ_T0066154.1 MGP_CBAJ_G0028166.1 mouse_genomes_project 4 110619369 110621092 + Sgip1 protein_coding processed_transcript MGP_CBAJ_T0066155.1 MGP_CBAJ_G0028166.1 mouse_genomes_project 4 110657082 110662633 + Sgip1 protein_coding processed_transcript MGP_CBAJ_T0014615.1 MGP_CBAJ_G0012727.1 mouse_genomes_project 4 163893745 163893886 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065671.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 80568510 81126621 - MGP_CBAJ_P0065671 Ptprd protein_coding protein_coding MGP_CBAJ_T0065672.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 80568511 80790257 - MGP_CBAJ_P0065672 Ptprd protein_coding protein_coding MGP_CBAJ_T0065673.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 80573249 81286762 - MGP_CBAJ_P0065673 Ptprd protein_coding protein_coding MGP_CBAJ_T0065674.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 80573401 80996059 - MGP_CBAJ_P0065674 Ptprd protein_coding protein_coding MGP_CBAJ_T0065675.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 80573401 80996059 - MGP_CBAJ_P0065675 Ptprd protein_coding protein_coding MGP_CBAJ_T0065676.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 80573401 81016921 - MGP_CBAJ_P0065676 Ptprd protein_coding protein_coding MGP_CBAJ_T0065677.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 80573401 80996038 - MGP_CBAJ_P0065677 Ptprd protein_coding protein_coding MGP_CBAJ_T0065678.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 80573401 80996059 - MGP_CBAJ_P0065678 Ptprd protein_coding protein_coding MGP_CBAJ_T0065679.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 80573401 80996059 - MGP_CBAJ_P0065679 Ptprd protein_coding protein_coding MGP_CBAJ_T0065680.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 80732870 80752439 - Ptprd protein_coding retained_intron MGP_CBAJ_T0065681.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 80734994 80737140 - MGP_CBAJ_P0065681 Ptprd protein_coding protein_coding MGP_CBAJ_T0065682.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 80750396 80758144 - MGP_CBAJ_P0065682 Ptprd protein_coding nonsense_mediated_decay MGP_CBAJ_T0065683.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 80789532 80790518 - MGP_CBAJ_P0065683 Ptprd protein_coding protein_coding MGP_CBAJ_T0065684.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 80798089 83166950 - Ptprd protein_coding processed_transcript MGP_CBAJ_T0065685.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 80798980 81016976 - MGP_CBAJ_P0065685 Ptprd protein_coding unknown_likely_coding MGP_CBAJ_T0065686.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 80799065 80996083 - Ptprd protein_coding processed_transcript MGP_CBAJ_T0065687.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 81283801 83166922 - Ptprd protein_coding processed_transcript MGP_CBAJ_T0065688.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 81286013 83166794 - Ptprd protein_coding processed_transcript MGP_CBAJ_T0065689.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 81979218 83166794 - Ptprd protein_coding retained_intron MGP_CBAJ_T0065690.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 82151988 83167016 - Ptprd protein_coding processed_transcript MGP_CBAJ_T0065691.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 82827447 83166907 - Ptprd protein_coding processed_transcript MGP_CBAJ_T0065692.1 MGP_CBAJ_G0028056.1 mouse_genomes_project 4 82835197 83166898 - Ptprd protein_coding retained_intron MGP_CBAJ_T0010482.1 MGP_CBAJ_G0008620.1 mouse_genomes_project 4 105697133 105697229 + Gm26154 miRNA miRNA MGP_CBAJ_T0068213.1 MGP_CBAJ_G0028613.1 mouse_genomes_project 4 147198194 147201127 - MGP_CBAJ_P0068213 Pnrc2 protein_coding protein_coding MGP_CBAJ_T0068214.1 MGP_CBAJ_G0028613.1 mouse_genomes_project 4 147199600 147200847 - MGP_CBAJ_P0068214 Pnrc2 protein_coding protein_coding MGP_CBAJ_T0068215.1 MGP_CBAJ_G0028613.1 mouse_genomes_project 4 147199727 147200338 - MGP_CBAJ_P0068215 Pnrc2 protein_coding protein_coding MGP_CBAJ_T0065335.1 MGP_CBAJ_G0027960.1 mouse_genomes_project 4 55251064 55259404 - MGP_CBAJ_P0065335 Olfr272 protein_coding protein_coding MGP_CBAJ_T0065336.1 MGP_CBAJ_G0027960.1 mouse_genomes_project 4 55251064 55252026 - MGP_CBAJ_P0065336 Olfr272 protein_coding protein_coding MGP_CBAJ_T0014425.1 MGP_CBAJ_G0012537.1 mouse_genomes_project 4 85751644 85752128 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007712.1 MGP_CBAJ_G0006295.1 mouse_genomes_project 4 20926174 20932068 + lincRNA lincRNA MGP_CBAJ_T0065795.1 MGP_CBAJ_G0028073.1 mouse_genomes_project 4 90880002 91093064 + MGP_CBAJ_P0065795 Sh3gl2 protein_coding protein_coding MGP_CBAJ_T0065796.1 MGP_CBAJ_G0028073.1 mouse_genomes_project 4 90880317 91082915 + MGP_CBAJ_P0065796 Sh3gl2 protein_coding protein_coding MGP_CBAJ_T0065797.1 MGP_CBAJ_G0028073.1 mouse_genomes_project 4 90880345 91361508 + MGP_CBAJ_P0065797 Sh3gl2 protein_coding protein_coding MGP_CBAJ_T0065798.1 MGP_CBAJ_G0028073.1 mouse_genomes_project 4 90880411 91071166 + MGP_CBAJ_P0065798 Sh3gl2 protein_coding protein_coding MGP_CBAJ_T0065799.1 MGP_CBAJ_G0028073.1 mouse_genomes_project 4 91069815 91081143 + MGP_CBAJ_P0065799 Sh3gl2 protein_coding protein_coding MGP_CBAJ_T0067005.1 MGP_CBAJ_G0028334.1 mouse_genomes_project 4 127556552 127559410 + MGP_CBAJ_P0067005 2610528J11Rik protein_coding protein_coding MGP_CBAJ_T0067006.1 MGP_CBAJ_G0028334.1 mouse_genomes_project 4 127556796 127559783 + MGP_CBAJ_P0067006 2610528J11Rik protein_coding protein_coding MGP_CBAJ_T0068918.1 MGP_CBAJ_G0028802.1 mouse_genomes_project 4 163351622 163470619 - MGP_CBAJ_P0068918 Ube4b protein_coding protein_coding MGP_CBAJ_T0068919.1 MGP_CBAJ_G0028802.1 mouse_genomes_project 4 163351628 163358327 - MGP_CBAJ_P0068919 Ube4b protein_coding nonsense_mediated_decay MGP_CBAJ_T0068920.1 MGP_CBAJ_G0028802.1 mouse_genomes_project 4 163352702 163355041 - Ube4b protein_coding processed_transcript MGP_CBAJ_T0068921.1 MGP_CBAJ_G0028802.1 mouse_genomes_project 4 163352879 163469775 - MGP_CBAJ_P0068921 Ube4b protein_coding nonsense_mediated_decay MGP_CBAJ_T0068922.1 MGP_CBAJ_G0028802.1 mouse_genomes_project 4 163352879 163469775 - MGP_CBAJ_P0068922 Ube4b protein_coding nonsense_mediated_decay MGP_CBAJ_T0068923.1 MGP_CBAJ_G0028802.1 mouse_genomes_project 4 163358414 163359321 - Ube4b protein_coding processed_transcript MGP_CBAJ_T0068924.1 MGP_CBAJ_G0028802.1 mouse_genomes_project 4 163378822 163379803 - Ube4b protein_coding retained_intron MGP_CBAJ_T0068925.1 MGP_CBAJ_G0028802.1 mouse_genomes_project 4 163393360 163470501 - Ube4b protein_coding retained_intron MGP_CBAJ_T0068926.1 MGP_CBAJ_G0028802.1 mouse_genomes_project 4 163419350 163470470 - Ube4b protein_coding processed_transcript MGP_CBAJ_T0068927.1 MGP_CBAJ_G0028802.1 mouse_genomes_project 4 163421334 163421924 - Ube4b protein_coding processed_transcript MGP_CBAJ_T0068928.1 MGP_CBAJ_G0028802.1 mouse_genomes_project 4 163439944 163470086 - Ube4b protein_coding retained_intron MGP_CBAJ_T0066352.1 MGP_CBAJ_G0028207.1 mouse_genomes_project 4 116033104 116109482 + MGP_CBAJ_P0066352 Lrp8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066353.1 MGP_CBAJ_G0028207.1 mouse_genomes_project 4 116033120 116108131 + MGP_CBAJ_P0066353 Lrp8 protein_coding protein_coding MGP_CBAJ_T0066354.1 MGP_CBAJ_G0028207.1 mouse_genomes_project 4 116033157 116109214 + MGP_CBAJ_P0066354 Lrp8 protein_coding protein_coding MGP_CBAJ_T0066355.1 MGP_CBAJ_G0028207.1 mouse_genomes_project 4 116033191 116108131 + MGP_CBAJ_P0066355 Lrp8 protein_coding protein_coding MGP_CBAJ_T0066356.1 MGP_CBAJ_G0028207.1 mouse_genomes_project 4 116033256 116107629 + MGP_CBAJ_P0066356 Lrp8 protein_coding protein_coding MGP_CBAJ_T0066357.1 MGP_CBAJ_G0028207.1 mouse_genomes_project 4 116033684 116082123 + Lrp8 protein_coding processed_transcript MGP_CBAJ_T0066358.1 MGP_CBAJ_G0028207.1 mouse_genomes_project 4 116034093 116108131 + Lrp8 protein_coding processed_transcript MGP_CBAJ_T0066359.1 MGP_CBAJ_G0028207.1 mouse_genomes_project 4 116053997 116108131 + Lrp8 protein_coding processed_transcript MGP_CBAJ_T0066360.1 MGP_CBAJ_G0028207.1 mouse_genomes_project 4 116061785 116068038 + Lrp8 protein_coding retained_intron MGP_CBAJ_T0066361.1 MGP_CBAJ_G0028207.1 mouse_genomes_project 4 116061805 116112155 + MGP_CBAJ_P0066361 Lrp8 protein_coding protein_coding MGP_CBAJ_T0066362.1 MGP_CBAJ_G0028207.1 mouse_genomes_project 4 116076964 116079059 + Lrp8 protein_coding retained_intron MGP_CBAJ_T0066363.1 MGP_CBAJ_G0028207.1 mouse_genomes_project 4 116080888 116087623 + Lrp8 protein_coding processed_transcript MGP_CBAJ_T0017850.1 MGP_CBAJ_G0015322.1 mouse_genomes_project 4 144947188 144948891 + Gm13061 processed_transcript processed_transcript MGP_CBAJ_T0014339.1 MGP_CBAJ_G0012451.1 mouse_genomes_project 4 47742373 47742784 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014197.1 MGP_CBAJ_G0012309.1 mouse_genomes_project 4 1110098 1110614 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014375.1 MGP_CBAJ_G0012487.1 mouse_genomes_project 4 61358731 61359305 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004359.1 MGP_CBAJ_G0003796.1 mouse_genomes_project 4 44592229 44615346 + Gm12472 antisense antisense MGP_CBAJ_T0066873.1 MGP_CBAJ_G0028310.1 mouse_genomes_project 4 126038044 126064237 - MGP_CBAJ_P0066873 Kif2c protein_coding protein_coding MGP_CBAJ_T0066874.1 MGP_CBAJ_G0028310.1 mouse_genomes_project 4 126038548 126060715 - MGP_CBAJ_P0066874 Kif2c protein_coding protein_coding MGP_CBAJ_T0066875.1 MGP_CBAJ_G0028310.1 mouse_genomes_project 4 126043082 126043816 - Kif2c protein_coding retained_intron MGP_CBAJ_T0066876.1 MGP_CBAJ_G0028310.1 mouse_genomes_project 4 126055646 126064140 - Kif2c protein_coding retained_intron MGP_CBAJ_T0066877.1 MGP_CBAJ_G0028310.1 mouse_genomes_project 4 126055648 126064204 - Kif2c protein_coding processed_transcript MGP_CBAJ_T0066878.1 MGP_CBAJ_G0028310.1 mouse_genomes_project 4 126056386 126064190 - Kif2c protein_coding retained_intron MGP_CBAJ_T0066879.1 MGP_CBAJ_G0028310.1 mouse_genomes_project 4 126056927 126060697 - Kif2c protein_coding processed_transcript MGP_CBAJ_T0066880.1 MGP_CBAJ_G0028310.1 mouse_genomes_project 4 126056970 126060713 - MGP_CBAJ_P0066880 Kif2c protein_coding protein_coding MGP_CBAJ_T0067994.1 MGP_CBAJ_G0028566.1 mouse_genomes_project 4 144744011 144790667 - MGP_CBAJ_P0067994 Rps6ka1 protein_coding protein_coding MGP_CBAJ_T0067995.1 MGP_CBAJ_G0028566.1 mouse_genomes_project 4 144744020 144790819 - MGP_CBAJ_P0067995 Rps6ka1 protein_coding protein_coding MGP_CBAJ_T0067996.1 MGP_CBAJ_G0028566.1 mouse_genomes_project 4 144744020 144777747 - MGP_CBAJ_P0067996 Rps6ka1 protein_coding protein_coding MGP_CBAJ_T0067997.1 MGP_CBAJ_G0028566.1 mouse_genomes_project 4 144744542 144775326 - MGP_CBAJ_P0067997 Rps6ka1 protein_coding protein_coding MGP_CBAJ_T0067998.1 MGP_CBAJ_G0028566.1 mouse_genomes_project 4 144744774 144776047 - MGP_CBAJ_P0067998 Rps6ka1 protein_coding protein_coding MGP_CBAJ_T0067999.1 MGP_CBAJ_G0028566.1 mouse_genomes_project 4 144747397 144758401 - Rps6ka1 protein_coding retained_intron MGP_CBAJ_T0068000.1 MGP_CBAJ_G0028566.1 mouse_genomes_project 4 144757638 144758513 - Rps6ka1 protein_coding retained_intron MGP_CBAJ_T0068001.1 MGP_CBAJ_G0028566.1 mouse_genomes_project 4 144774976 144790609 - Rps6ka1 protein_coding processed_transcript MGP_CBAJ_T0004403.1 MGP_CBAJ_G0003828.1 mouse_genomes_project 4 106910352 106969817 - Gm12682 antisense antisense MGP_CBAJ_T0010465.1 MGP_CBAJ_G0008603.1 mouse_genomes_project 4 46071563 46071688 + Gm22639 miRNA miRNA MGP_CBAJ_T0065571.1 MGP_CBAJ_G0028027.1 mouse_genomes_project 4 66507726 66518632 - MGP_CBAJ_P0065571 Ambp protein_coding protein_coding MGP_CBAJ_T0065572.1 MGP_CBAJ_G0028027.1 mouse_genomes_project 4 66517148 66519258 - MGP_CBAJ_P0065572 Ambp protein_coding protein_coding MGP_CBAJ_T0004418.1 MGP_CBAJ_G0003839.1 mouse_genomes_project 4 117367480 117398583 - 8030443G20Rik antisense antisense MGP_CBAJ_T0067202.1 MGP_CBAJ_G0028394.1 mouse_genomes_project 4 132479534 132480622 + MGP_CBAJ_P0067202 Mycl protein_coding protein_coding MGP_CBAJ_T0067203.1 MGP_CBAJ_G0028394.1 mouse_genomes_project 4 132479826 132486363 + MGP_CBAJ_P0067203 Mycl protein_coding protein_coding MGP_CBAJ_T0067204.1 MGP_CBAJ_G0028394.1 mouse_genomes_project 4 132479981 132486363 + MGP_CBAJ_P0067204 Mycl protein_coding protein_coding MGP_CBAJ_T0067205.1 MGP_CBAJ_G0028394.1 mouse_genomes_project 4 132482757 132484345 + Mycl protein_coding processed_transcript MGP_CBAJ_T0067206.1 MGP_CBAJ_G0028394.1 mouse_genomes_project 4 132483216 132484395 + Mycl protein_coding processed_transcript MGP_CBAJ_T0014475.1 MGP_CBAJ_G0012587.1 mouse_genomes_project 4 107949739 107950196 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0067295.1 MGP_CBAJ_G0028417.1 mouse_genomes_project 4 134526845 134528096 - protein_coding retained_intron MGP_CBAJ_T0067296.1 MGP_CBAJ_G0028417.1 mouse_genomes_project 4 134527250 134528575 - MGP_CBAJ_P0067296 protein_coding protein_coding MGP_CBAJ_T0067297.1 MGP_CBAJ_G0028417.1 mouse_genomes_project 4 134527250 134528496 - MGP_CBAJ_P0067297 protein_coding protein_coding MGP_CBAJ_T0067298.1 MGP_CBAJ_G0028417.1 mouse_genomes_project 4 134527251 134528427 - MGP_CBAJ_P0067298 protein_coding protein_coding MGP_CBAJ_T0067299.1 MGP_CBAJ_G0028417.1 mouse_genomes_project 4 134527255 134528973 - MGP_CBAJ_P0067299 protein_coding protein_coding MGP_CBAJ_T0067300.1 MGP_CBAJ_G0028417.1 mouse_genomes_project 4 134527311 134528239 - MGP_CBAJ_P0067300 protein_coding protein_coding MGP_CBAJ_T0014381.1 MGP_CBAJ_G0012493.1 mouse_genomes_project 4 66295193 66295857 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101909.1 MGP_CBAJ_G0039940.1 mouse_genomes_project 4 124265465 124268386 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0014445.1 MGP_CBAJ_G0012557.1 mouse_genomes_project 4 96744406 96745158 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014258.1 MGP_CBAJ_G0012370.1 mouse_genomes_project 4 20966894 20967294 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0067198.1 MGP_CBAJ_G0028393.1 mouse_genomes_project 4 132420120 132435439 - Mfsd2a protein_coding processed_transcript MGP_CBAJ_T0067199.1 MGP_CBAJ_G0028393.1 mouse_genomes_project 4 132420120 132435475 - MGP_CBAJ_P0067199 Mfsd2a protein_coding protein_coding MGP_CBAJ_T0067200.1 MGP_CBAJ_G0028393.1 mouse_genomes_project 4 132431025 132434275 - Mfsd2a protein_coding processed_transcript MGP_CBAJ_T0067201.1 MGP_CBAJ_G0028393.1 mouse_genomes_project 4 132431052 132435475 - MGP_CBAJ_P0067201 Mfsd2a protein_coding protein_coding MGP_CBAJ_T0068524.1 MGP_CBAJ_G0028688.1 mouse_genomes_project 4 152959973 152985550 + MGP_CBAJ_P0068524 Rcc2 protein_coding protein_coding MGP_CBAJ_T0068525.1 MGP_CBAJ_G0028688.1 mouse_genomes_project 4 152960905 152985550 + MGP_CBAJ_P0068525 Rcc2 protein_coding protein_coding MGP_CBAJ_T0068526.1 MGP_CBAJ_G0028688.1 mouse_genomes_project 4 152960905 152972634 + MGP_CBAJ_P0068526 Rcc2 protein_coding protein_coding MGP_CBAJ_T0068527.1 MGP_CBAJ_G0028688.1 mouse_genomes_project 4 152976514 152979382 + Rcc2 protein_coding processed_transcript MGP_CBAJ_T0068528.1 MGP_CBAJ_G0028688.1 mouse_genomes_project 4 152976541 152979290 + Rcc2 protein_coding processed_transcript MGP_CBAJ_T0067172.1 MGP_CBAJ_G0028383.1 mouse_genomes_project 4 130314525 130363349 - MGP_CBAJ_P0067172 Smap2 protein_coding protein_coding MGP_CBAJ_T0067173.1 MGP_CBAJ_G0028383.1 mouse_genomes_project 4 130318085 130321904 - Smap2 protein_coding processed_transcript MGP_CBAJ_T0014313.1 MGP_CBAJ_G0012425.1 mouse_genomes_project 4 37484437 37484905 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007755.1 MGP_CBAJ_G0006333.1 mouse_genomes_project 4 60084770 60091949 + Gm12536 lincRNA lincRNA MGP_CBAJ_T0014369.1 MGP_CBAJ_G0012481.1 mouse_genomes_project 4 57959130 57959515 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014354.1 MGP_CBAJ_G0012466.1 mouse_genomes_project 4 54633767 54635156 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064586.1 MGP_CBAJ_G0027799.1 mouse_genomes_project 4 34566145 34594804 - MGP_CBAJ_P0064586 Slc35a1 protein_coding protein_coding MGP_CBAJ_T0064587.1 MGP_CBAJ_G0027799.1 mouse_genomes_project 4 34566767 34590836 - Slc35a1 protein_coding processed_transcript MGP_CBAJ_T0064588.1 MGP_CBAJ_G0027799.1 mouse_genomes_project 4 34572364 34590743 - MGP_CBAJ_P0064588 Slc35a1 protein_coding protein_coding MGP_CBAJ_T0064589.1 MGP_CBAJ_G0027799.1 mouse_genomes_project 4 34577857 34594621 - Slc35a1 protein_coding processed_transcript MGP_CBAJ_T0064590.1 MGP_CBAJ_G0027799.1 mouse_genomes_project 4 34590714 34594762 - Slc35a1 protein_coding processed_transcript MGP_CBAJ_T0069122.1 MGP_CBAJ_G0028840.1 mouse_genomes_project 4 166826034 166837139 + MGP_CBAJ_P0069122 Gpr153 protein_coding protein_coding MGP_CBAJ_T0069123.1 MGP_CBAJ_G0028840.1 mouse_genomes_project 4 166826164 166837139 + MGP_CBAJ_P0069123 Gpr153 protein_coding protein_coding MGP_CBAJ_T0069124.1 MGP_CBAJ_G0028840.1 mouse_genomes_project 4 166830814 166837139 + MGP_CBAJ_P0069124 Gpr153 protein_coding protein_coding MGP_CBAJ_T0069125.1 MGP_CBAJ_G0028840.1 mouse_genomes_project 4 166834171 166837138 + Gpr153 protein_coding processed_transcript MGP_CBAJ_T0068502.1 MGP_CBAJ_G0028681.1 mouse_genomes_project 4 151739289 151804514 + MGP_CBAJ_P0068502 Gm21969 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066802.1 MGP_CBAJ_G0028297.1 mouse_genomes_project 4 125489208 125610565 + MGP_CBAJ_P0066802 Tesk2 protein_coding protein_coding MGP_CBAJ_T0066806.1 MGP_CBAJ_G0028297.1 mouse_genomes_project 4 125503794 125613210 + MGP_CBAJ_P0066806 Tesk2 protein_coding protein_coding MGP_CBAJ_T0066807.1 MGP_CBAJ_G0028297.1 mouse_genomes_project 4 125524665 125611356 + MGP_CBAJ_P0066807 Tesk2 protein_coding protein_coding MGP_CBAJ_T0066808.1 MGP_CBAJ_G0028297.1 mouse_genomes_project 4 125563513 125609516 + Tesk2 protein_coding processed_transcript MGP_CBAJ_T0067580.1 MGP_CBAJ_G0028482.1 mouse_genomes_project 4 139498259 139533019 + MGP_CBAJ_P0067580 Zbtb8os protein_coding nonsense_mediated_decay MGP_CBAJ_T0067581.1 MGP_CBAJ_G0028482.1 mouse_genomes_project 4 139510833 139525043 + MGP_CBAJ_P0067581 Zbtb8os protein_coding protein_coding MGP_CBAJ_T0067582.1 MGP_CBAJ_G0028482.1 mouse_genomes_project 4 139510873 139525186 + MGP_CBAJ_P0067582 Zbtb8os protein_coding nonsense_mediated_decay MGP_CBAJ_T0067583.1 MGP_CBAJ_G0028482.1 mouse_genomes_project 4 139519513 139525083 + Zbtb8os protein_coding retained_intron MGP_CBAJ_T0068316.1 MGP_CBAJ_G0028640.1 mouse_genomes_project 4 148896450 148921918 + MGP_CBAJ_P0068316 Wnt4 protein_coding protein_coding MGP_CBAJ_T0064271.1 MGP_CBAJ_G0027721.1 mouse_genomes_project 4 8298232 8324404 - MGP_CBAJ_P0064271 Ndufaf6 protein_coding protein_coding MGP_CBAJ_T0064272.1 MGP_CBAJ_G0027721.1 mouse_genomes_project 4 8298237 8304250 - Ndufaf6 protein_coding processed_transcript MGP_CBAJ_T0064273.1 MGP_CBAJ_G0027721.1 mouse_genomes_project 4 8298400 8324349 - Ndufaf6 protein_coding processed_transcript MGP_CBAJ_T0064274.1 MGP_CBAJ_G0027721.1 mouse_genomes_project 4 8304239 8324349 - Ndufaf6 protein_coding processed_transcript MGP_CBAJ_T0064275.1 MGP_CBAJ_G0027721.1 mouse_genomes_project 4 8307219 8324383 - Ndufaf6 protein_coding processed_transcript MGP_CBAJ_T0064276.1 MGP_CBAJ_G0027721.1 mouse_genomes_project 4 8318449 8324405 - Ndufaf6 protein_coding processed_transcript MGP_CBAJ_T0064277.1 MGP_CBAJ_G0027721.1 mouse_genomes_project 4 8321193 8324388 - Ndufaf6 protein_coding processed_transcript MGP_CBAJ_T0066217.1 MGP_CBAJ_G0028182.1 mouse_genomes_project 4 114371298 114506238 + MGP_CBAJ_P0066217 Usp24 protein_coding protein_coding MGP_CBAJ_T0066218.1 MGP_CBAJ_G0028182.1 mouse_genomes_project 4 114371305 114423148 + Usp24 protein_coding retained_intron MGP_CBAJ_T0066219.1 MGP_CBAJ_G0028182.1 mouse_genomes_project 4 114371319 114506243 + MGP_CBAJ_P0066219 Usp24 protein_coding protein_coding MGP_CBAJ_T0066220.1 MGP_CBAJ_G0028182.1 mouse_genomes_project 4 114493424 114495776 + Usp24 protein_coding processed_transcript MGP_CBAJ_T0004479.1 MGP_CBAJ_G0003888.1 mouse_genomes_project 4 151274744 151279944 - Gm16287 antisense antisense MGP_CBAJ_T0007752.1 MGP_CBAJ_G0006330.1 mouse_genomes_project 4 58224702 58258089 + Gm12506 lincRNA lincRNA MGP_CBAJ_T0014358.1 MGP_CBAJ_G0012470.1 mouse_genomes_project 4 55238012 55242914 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0066551.1 MGP_CBAJ_G0028242.1 mouse_genomes_project 4 118974665 119601974 + MGP_CBAJ_P0066551 Agbl4 protein_coding protein_coding MGP_CBAJ_T0066552.1 MGP_CBAJ_G0028242.1 mouse_genomes_project 4 118974702 119266075 + MGP_CBAJ_P0066552 Agbl4 protein_coding protein_coding MGP_CBAJ_T0066553.1 MGP_CBAJ_G0028242.1 mouse_genomes_project 4 118974702 120358593 + MGP_CBAJ_P0066553 Agbl4 protein_coding protein_coding MGP_CBAJ_T0066554.1 MGP_CBAJ_G0028242.1 mouse_genomes_project 4 118974702 120249858 + MGP_CBAJ_P0066554 Agbl4 protein_coding protein_coding MGP_CBAJ_T0066555.1 MGP_CBAJ_G0028242.1 mouse_genomes_project 4 118974795 120351876 + MGP_CBAJ_P0066555 Agbl4 protein_coding protein_coding MGP_CBAJ_T0066556.1 MGP_CBAJ_G0028242.1 mouse_genomes_project 4 118974795 120351876 + MGP_CBAJ_P0066556 Agbl4 protein_coding protein_coding MGP_CBAJ_T0066557.1 MGP_CBAJ_G0028242.1 mouse_genomes_project 4 119773652 119919053 + Agbl4 protein_coding processed_transcript MGP_CBAJ_T0066558.1 MGP_CBAJ_G0028242.1 mouse_genomes_project 4 119773722 120312697 + MGP_CBAJ_P0066558 Agbl4 protein_coding protein_coding MGP_CBAJ_T0066565.1 MGP_CBAJ_G0028242.1 mouse_genomes_project 4 120249542 120350935 + Agbl4 protein_coding processed_transcript MGP_CBAJ_T0066566.1 MGP_CBAJ_G0028242.1 mouse_genomes_project 4 120249572 120351873 + Agbl4 protein_coding processed_transcript MGP_CBAJ_T0068313.1 MGP_CBAJ_G0028639.1 mouse_genomes_project 4 148548716 148619184 - MGP_CBAJ_P0068313 Zbtb40 protein_coding unknown_likely_coding MGP_CBAJ_T0068314.1 MGP_CBAJ_G0028639.1 mouse_genomes_project 4 148548719 148619084 - MGP_CBAJ_P0068314 Zbtb40 protein_coding protein_coding MGP_CBAJ_T0068315.1 MGP_CBAJ_G0028639.1 mouse_genomes_project 4 148583094 148619190 - Zbtb40 protein_coding retained_intron MGP_CBAJ_T0066581.1 MGP_CBAJ_G0028245.1 mouse_genomes_project 4 120603419 120633519 - MGP_CBAJ_P0066581 Slc5a9 protein_coding protein_coding MGP_CBAJ_T0066582.1 MGP_CBAJ_G0028245.1 mouse_genomes_project 4 120603473 120612266 - Slc5a9 protein_coding processed_transcript MGP_CBAJ_T0066583.1 MGP_CBAJ_G0028245.1 mouse_genomes_project 4 120604317 120629359 - MGP_CBAJ_P0066583 Slc5a9 protein_coding protein_coding MGP_CBAJ_T0066584.1 MGP_CBAJ_G0028245.1 mouse_genomes_project 4 120605289 120633355 - MGP_CBAJ_P0066584 Slc5a9 protein_coding protein_coding MGP_CBAJ_T0066585.1 MGP_CBAJ_G0028245.1 mouse_genomes_project 4 120605534 120608683 - Slc5a9 protein_coding processed_transcript MGP_CBAJ_T0066586.1 MGP_CBAJ_G0028245.1 mouse_genomes_project 4 120618015 120626964 - MGP_CBAJ_P0066586 Slc5a9 protein_coding protein_coding MGP_CBAJ_T0066587.1 MGP_CBAJ_G0028245.1 mouse_genomes_project 4 120618344 120619844 - Slc5a9 protein_coding processed_transcript MGP_CBAJ_T0066588.1 MGP_CBAJ_G0028245.1 mouse_genomes_project 4 120618383 120619109 - Slc5a9 protein_coding processed_transcript MGP_CBAJ_T0067980.1 MGP_CBAJ_G0028563.1 mouse_genomes_project 4 144446434 144476921 - MGP_CBAJ_P0067980 Zdhhc18 protein_coding protein_coding MGP_CBAJ_T0067981.1 MGP_CBAJ_G0028563.1 mouse_genomes_project 4 144449800 144456709 - Zdhhc18 protein_coding retained_intron MGP_CBAJ_T0067982.1 MGP_CBAJ_G0028563.1 mouse_genomes_project 4 144449870 144454175 - Zdhhc18 protein_coding processed_transcript MGP_CBAJ_T0067983.1 MGP_CBAJ_G0028563.1 mouse_genomes_project 4 144454456 144456484 - Zdhhc18 protein_coding retained_intron MGP_CBAJ_T0067984.1 MGP_CBAJ_G0028563.1 mouse_genomes_project 4 144470771 144495685 - Zdhhc18 protein_coding processed_transcript MGP_CBAJ_T0004502.1 MGP_CBAJ_G0003905.1 mouse_genomes_project 4 162442437 162443720 - Gm13209 antisense antisense MGP_CBAJ_T0099324.1 MGP_CBAJ_G0037579.1 mouse_genomes_project 4 165323443 165323603 + Gm23405 snRNA snRNA MGP_CBAJ_T0014558.1 MGP_CBAJ_G0012670.1 mouse_genomes_project 4 134388008 134388647 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068989.1 MGP_CBAJ_G0028816.1 mouse_genomes_project 4 164382316 164401576 - MGP_CBAJ_P0068989 Car6 protein_coding protein_coding MGP_CBAJ_T0068990.1 MGP_CBAJ_G0028816.1 mouse_genomes_project 4 164382316 164398402 - MGP_CBAJ_P0068990 Car6 protein_coding protein_coding MGP_CBAJ_T0068991.1 MGP_CBAJ_G0028816.1 mouse_genomes_project 4 164382513 164396055 - Car6 protein_coding processed_transcript MGP_CBAJ_T0068992.1 MGP_CBAJ_G0028816.1 mouse_genomes_project 4 164383582 164398135 - Car6 protein_coding processed_transcript MGP_CBAJ_T0069177.1 MGP_CBAJ_G0028849.1 mouse_genomes_project 4 168778822 168783511 + MGP_CBAJ_P0069177 A430005L14Rik protein_coding protein_coding MGP_CBAJ_T0069178.1 MGP_CBAJ_G0028849.1 mouse_genomes_project 4 168778822 168783504 + MGP_CBAJ_P0069178 A430005L14Rik protein_coding protein_coding MGP_CBAJ_T0069179.1 MGP_CBAJ_G0028849.1 mouse_genomes_project 4 168778840 168781652 + A430005L14Rik protein_coding retained_intron MGP_CBAJ_T0069180.1 MGP_CBAJ_G0028849.1 mouse_genomes_project 4 168778851 168783097 + MGP_CBAJ_P0069180 A430005L14Rik protein_coding protein_coding MGP_CBAJ_T0069181.1 MGP_CBAJ_G0028849.1 mouse_genomes_project 4 168778851 168783389 + MGP_CBAJ_P0069181 A430005L14Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0069182.1 MGP_CBAJ_G0028849.1 mouse_genomes_project 4 168778914 168782320 + A430005L14Rik protein_coding processed_transcript MGP_CBAJ_T0069183.1 MGP_CBAJ_G0028849.1 mouse_genomes_project 4 168781377 168782675 + A430005L14Rik protein_coding retained_intron MGP_CBAJ_T0014533.1 MGP_CBAJ_G0012645.1 mouse_genomes_project 4 127551571 127552163 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0065014.1 MGP_CBAJ_G0027882.1 mouse_genomes_project 4 44671383 44672208 - MGP_CBAJ_P0065014 Spag8 protein_coding protein_coding MGP_CBAJ_T0065015.1 MGP_CBAJ_G0027882.1 mouse_genomes_project 4 44671383 44673601 - MGP_CBAJ_P0065015 Spag8 protein_coding protein_coding MGP_CBAJ_T0065016.1 MGP_CBAJ_G0027882.1 mouse_genomes_project 4 44671724 44673643 - MGP_CBAJ_P0065016 Spag8 protein_coding protein_coding MGP_CBAJ_T0065556.1 MGP_CBAJ_G0028024.1 mouse_genomes_project 4 65854936 65879658 + MGP_CBAJ_P0065556 4933430I17Rik protein_coding protein_coding MGP_CBAJ_T0065557.1 MGP_CBAJ_G0028024.1 mouse_genomes_project 4 65855378 65879427 + MGP_CBAJ_P0065557 4933430I17Rik protein_coding unknown_likely_coding MGP_CBAJ_T0007786.1 MGP_CBAJ_G0006359.1 mouse_genomes_project 4 95434406 95477590 - Gm12606 lincRNA lincRNA MGP_CBAJ_T0007787.1 MGP_CBAJ_G0006359.1 mouse_genomes_project 4 95434424 95478420 - Gm12606 lincRNA lincRNA MGP_CBAJ_T0014417.1 MGP_CBAJ_G0012529.1 mouse_genomes_project 4 81544736 81545773 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0064407.1 MGP_CBAJ_G0027761.1 mouse_genomes_project 4 20011903 20020400 - Prdm13 protein_coding processed_transcript MGP_CBAJ_T0064408.1 MGP_CBAJ_G0027761.1 mouse_genomes_project 4 20011904 20020400 - MGP_CBAJ_P0064408 Prdm13 protein_coding protein_coding MGP_CBAJ_T0064409.1 MGP_CBAJ_G0027761.1 mouse_genomes_project 4 20011904 20020220 - MGP_CBAJ_P0064409 Prdm13 protein_coding protein_coding MGP_CBAJ_T0064410.1 MGP_CBAJ_G0027761.1 mouse_genomes_project 4 20014088 20020220 - Prdm13 protein_coding processed_transcript MGP_CBAJ_T0064411.1 MGP_CBAJ_G0027761.1 mouse_genomes_project 4 20014170 20020218 - Prdm13 protein_coding processed_transcript MGP_CBAJ_T0064412.1 MGP_CBAJ_G0027761.1 mouse_genomes_project 4 20016731 20020282 - Prdm13 protein_coding retained_intron MGP_CBAJ_T0069527.1 MGP_CBAJ_G0028916.1 mouse_genomes_project 4 171355035 171368661 - MGP_CBAJ_P0069527 Klhl17 protein_coding protein_coding MGP_CBAJ_T0069528.1 MGP_CBAJ_G0028916.1 mouse_genomes_project 4 171356025 171368835 - MGP_CBAJ_P0069528 Klhl17 protein_coding unknown_likely_coding MGP_CBAJ_T0010473.1 MGP_CBAJ_G0008611.1 mouse_genomes_project 4 81696665 81696742 - Gm23159 miRNA miRNA MGP_CBAJ_T0010496.1 MGP_CBAJ_G0008634.1 mouse_genomes_project 4 134400611 134400720 + Mir697 miRNA miRNA MGP_CBAJ_T0100595.1 MGP_CBAJ_G0038850.1 mouse_genomes_project 4 168683360 168683492 + Gm25880 snoRNA snoRNA MGP_CBAJ_T0100541.1 MGP_CBAJ_G0038796.1 mouse_genomes_project 4 59484923 59485043 - Gm22952 snoRNA snoRNA MGP_CBAJ_T0010520.1 MGP_CBAJ_G0008658.1 mouse_genomes_project 4 151786216 151786286 + Mir7020 miRNA miRNA MGP_CBAJ_T0001373.1 MGP_CBAJ_G0001299.1 mouse_genomes_project 4 45885006 45887317 + TEC TEC MGP_CBAJ_T0014301.1 MGP_CBAJ_G0012413.1 mouse_genomes_project 4 32938929 32939119 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0064824.1 MGP_CBAJ_G0027857.1 mouse_genomes_project 4 43856838 43879025 + Phf24 protein_coding processed_transcript MGP_CBAJ_T0064825.1 MGP_CBAJ_G0027857.1 mouse_genomes_project 4 43856859 43874956 + MGP_CBAJ_P0064825 Phf24 protein_coding protein_coding MGP_CBAJ_T0064826.1 MGP_CBAJ_G0027857.1 mouse_genomes_project 4 43856872 43885877 + MGP_CBAJ_P0064826 Phf24 protein_coding protein_coding MGP_CBAJ_T0064827.1 MGP_CBAJ_G0027857.1 mouse_genomes_project 4 43857429 43885877 + MGP_CBAJ_P0064827 Phf24 protein_coding protein_coding MGP_CBAJ_T0064828.1 MGP_CBAJ_G0027857.1 mouse_genomes_project 4 43857448 43885877 + MGP_CBAJ_P0064828 Phf24 protein_coding protein_coding MGP_CBAJ_T0064829.1 MGP_CBAJ_G0027857.1 mouse_genomes_project 4 43857512 43881482 + MGP_CBAJ_P0064829 Phf24 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064830.1 MGP_CBAJ_G0027857.1 mouse_genomes_project 4 43862422 43874922 + MGP_CBAJ_P0064830 Phf24 protein_coding protein_coding MGP_CBAJ_T0064831.1 MGP_CBAJ_G0027857.1 mouse_genomes_project 4 43875043 43880638 + MGP_CBAJ_P0064831 Phf24 protein_coding protein_coding MGP_CBAJ_T0064832.1 MGP_CBAJ_G0027857.1 mouse_genomes_project 4 43879378 43880958 + MGP_CBAJ_P0064832 Phf24 protein_coding protein_coding MGP_CBAJ_T0014570.1 MGP_CBAJ_G0012682.1 mouse_genomes_project 4 139564626 139564962 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068312.1 MGP_CBAJ_G0028638.1 mouse_genomes_project 4 148492390 148525836 - MGP_CBAJ_P0068312 Epha8 protein_coding protein_coding MGP_CBAJ_T0067274.1 MGP_CBAJ_G0028411.1 mouse_genomes_project 4 134321713 134325561 + MGP_CBAJ_P0067274 Pou3f1 protein_coding protein_coding MGP_CBAJ_T0068469.1 MGP_CBAJ_G0028675.1 mouse_genomes_project 4 151398197 151418115 - MGP_CBAJ_P0068469 Pqlc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068470.1 MGP_CBAJ_G0028675.1 mouse_genomes_project 4 151402738 151418138 - MGP_CBAJ_P0068470 Pqlc2 protein_coding protein_coding MGP_CBAJ_T0068471.1 MGP_CBAJ_G0028675.1 mouse_genomes_project 4 151402740 151418095 - MGP_CBAJ_P0068471 Pqlc2 protein_coding protein_coding MGP_CBAJ_T0068472.1 MGP_CBAJ_G0028675.1 mouse_genomes_project 4 151402740 151418108 - MGP_CBAJ_P0068472 Pqlc2 protein_coding protein_coding MGP_CBAJ_T0068473.1 MGP_CBAJ_G0028675.1 mouse_genomes_project 4 151405534 151418067 - MGP_CBAJ_P0068473 Pqlc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066243.1 MGP_CBAJ_G0028190.1 mouse_genomes_project 4 114777003 114834045 - MGP_CBAJ_P0066243 protein_coding protein_coding MGP_CBAJ_T0066244.1 MGP_CBAJ_G0028190.1 mouse_genomes_project 4 114777010 114813668 - protein_coding processed_transcript MGP_CBAJ_T0066245.1 MGP_CBAJ_G0028190.1 mouse_genomes_project 4 114777010 114812184 - protein_coding retained_intron MGP_CBAJ_T0066246.1 MGP_CBAJ_G0028190.1 mouse_genomes_project 4 114777223 114813351 - protein_coding processed_transcript MGP_CBAJ_T0066247.1 MGP_CBAJ_G0028190.1 mouse_genomes_project 4 114790083 114800732 - protein_coding processed_transcript MGP_CBAJ_T0066248.1 MGP_CBAJ_G0028190.1 mouse_genomes_project 4 114812125 114834091 - MGP_CBAJ_P0066248 protein_coding protein_coding MGP_CBAJ_T0066249.1 MGP_CBAJ_G0028190.1 mouse_genomes_project 4 114827464 114837049 - MGP_CBAJ_P0066249 protein_coding protein_coding MGP_CBAJ_T0068968.1 MGP_CBAJ_G0028811.1 mouse_genomes_project 4 164025328 164097704 - MGP_CBAJ_P0068968 Spsb1 protein_coding protein_coding MGP_CBAJ_T0068969.1 MGP_CBAJ_G0028811.1 mouse_genomes_project 4 164027012 164038862 - MGP_CBAJ_P0068969 Spsb1 protein_coding protein_coding MGP_CBAJ_T0068970.1 MGP_CBAJ_G0028811.1 mouse_genomes_project 4 164027259 164036335 - MGP_CBAJ_P0068970 Spsb1 protein_coding protein_coding MGP_CBAJ_T0068971.1 MGP_CBAJ_G0028811.1 mouse_genomes_project 4 164035552 164096466 - MGP_CBAJ_P0068971 Spsb1 protein_coding protein_coding MGP_CBAJ_T0068972.1 MGP_CBAJ_G0028811.1 mouse_genomes_project 4 164036036 164055833 - MGP_CBAJ_P0068972 Spsb1 protein_coding protein_coding MGP_CBAJ_T0068973.1 MGP_CBAJ_G0028811.1 mouse_genomes_project 4 164036040 164071397 - MGP_CBAJ_P0068973 Spsb1 protein_coding protein_coding MGP_CBAJ_T0068974.1 MGP_CBAJ_G0028811.1 mouse_genomes_project 4 164036045 164085320 - MGP_CBAJ_P0068974 Spsb1 protein_coding protein_coding MGP_CBAJ_T0068975.1 MGP_CBAJ_G0028811.1 mouse_genomes_project 4 164036094 164088813 - MGP_CBAJ_P0068975 Spsb1 protein_coding protein_coding MGP_CBAJ_T0068976.1 MGP_CBAJ_G0028811.1 mouse_genomes_project 4 164036187 164097704 - Spsb1 protein_coding processed_transcript MGP_CBAJ_T0068977.1 MGP_CBAJ_G0028811.1 mouse_genomes_project 4 164038610 164097692 - Spsb1 protein_coding processed_transcript MGP_CBAJ_T0014338.1 MGP_CBAJ_G0012450.1 mouse_genomes_project 4 47683104 47684022 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014488.1 MGP_CBAJ_G0012600.1 mouse_genomes_project 4 113466366 113466817 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0067971.1 MGP_CBAJ_G0028559.1 mouse_genomes_project 4 144356361 144369705 - MGP_CBAJ_P0067971 Nudc protein_coding protein_coding MGP_CBAJ_T0067972.1 MGP_CBAJ_G0028559.1 mouse_genomes_project 4 144356958 144357162 - Nudc protein_coding processed_transcript MGP_CBAJ_T0067973.1 MGP_CBAJ_G0028559.1 mouse_genomes_project 4 144357964 144359629 - Nudc protein_coding processed_transcript MGP_CBAJ_T0101902.1 MGP_CBAJ_G0039933.1 mouse_genomes_project 4 120878880 120904759 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0068978.1 MGP_CBAJ_G0028812.1 mouse_genomes_project 4 164127325 164151013 - MGP_CBAJ_P0068978 H6pd protein_coding protein_coding MGP_CBAJ_T0068979.1 MGP_CBAJ_G0028812.1 mouse_genomes_project 4 164127325 164159421 - MGP_CBAJ_P0068979 H6pd protein_coding protein_coding MGP_CBAJ_T0068980.1 MGP_CBAJ_G0028812.1 mouse_genomes_project 4 164143739 164149148 - MGP_CBAJ_P0068980 H6pd protein_coding protein_coding MGP_CBAJ_T0068981.1 MGP_CBAJ_G0028812.1 mouse_genomes_project 4 164147667 164149173 - H6pd protein_coding processed_transcript MGP_CBAJ_T0014349.1 MGP_CBAJ_G0012461.1 mouse_genomes_project 4 52000229 52000724 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064975.1 MGP_CBAJ_G0027876.1 mouse_genomes_project 4 44523548 44565253 - MGP_CBAJ_P0064975 Tln1 protein_coding protein_coding MGP_CBAJ_T0064976.1 MGP_CBAJ_G0027876.1 mouse_genomes_project 4 44540381 44542619 - MGP_CBAJ_P0064976 Tln1 protein_coding protein_coding MGP_CBAJ_T0064977.1 MGP_CBAJ_G0027876.1 mouse_genomes_project 4 44541793 44546243 - MGP_CBAJ_P0064977 Tln1 protein_coding protein_coding MGP_CBAJ_T0064978.1 MGP_CBAJ_G0027876.1 mouse_genomes_project 4 44555481 44556481 - Tln1 protein_coding processed_transcript MGP_CBAJ_T0064979.1 MGP_CBAJ_G0027876.1 mouse_genomes_project 4 44556543 44564988 - Tln1 protein_coding processed_transcript MGP_CBAJ_T0064980.1 MGP_CBAJ_G0027876.1 mouse_genomes_project 4 44557135 44560487 - MGP_CBAJ_P0064980 Tln1 protein_coding protein_coding MGP_CBAJ_T0064981.1 MGP_CBAJ_G0027876.1 mouse_genomes_project 4 44557593 44557976 - Tln1 protein_coding processed_transcript MGP_CBAJ_T0064982.1 MGP_CBAJ_G0027876.1 mouse_genomes_project 4 44561369 44565521 - Tln1 protein_coding processed_transcript MGP_CBAJ_T0101888.1 MGP_CBAJ_G0039919.1 mouse_genomes_project 4 66747727 66769419 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0014361.1 MGP_CBAJ_G0012473.1 mouse_genomes_project 4 56223035 56223422 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067034.1 MGP_CBAJ_G0028352.1 mouse_genomes_project 4 128223262 128252477 + MGP_CBAJ_P0067034 Slc2a1 protein_coding protein_coding MGP_CBAJ_T0067035.1 MGP_CBAJ_G0028352.1 mouse_genomes_project 4 128223355 128247084 + MGP_CBAJ_P0067035 Slc2a1 protein_coding protein_coding MGP_CBAJ_T0067036.1 MGP_CBAJ_G0028352.1 mouse_genomes_project 4 128223410 128247056 + MGP_CBAJ_P0067036 Slc2a1 protein_coding protein_coding MGP_CBAJ_T0067037.1 MGP_CBAJ_G0028352.1 mouse_genomes_project 4 128223465 128251819 + MGP_CBAJ_P0067037 Slc2a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0014522.1 MGP_CBAJ_G0012634.1 mouse_genomes_project 4 125646467 125646782 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014411.1 MGP_CBAJ_G0012523.1 mouse_genomes_project 4 80471893 80472722 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004370.1 MGP_CBAJ_G0003805.1 mouse_genomes_project 4 48738140 48755449 - Gm12426 antisense antisense MGP_CBAJ_T0017788.1 MGP_CBAJ_G0015285.1 mouse_genomes_project 4 42325649 42330776 + Gm12404 processed_transcript processed_transcript MGP_CBAJ_T0068809.1 MGP_CBAJ_G0028783.1 mouse_genomes_project 4 161902903 161913518 - MGP_CBAJ_P0068809 Fbxo6 protein_coding protein_coding MGP_CBAJ_T0068810.1 MGP_CBAJ_G0028783.1 mouse_genomes_project 4 161902903 161909114 - MGP_CBAJ_P0068810 Fbxo6 protein_coding protein_coding MGP_CBAJ_T0068811.1 MGP_CBAJ_G0028783.1 mouse_genomes_project 4 161902974 161909119 - MGP_CBAJ_P0068811 Fbxo6 protein_coding protein_coding MGP_CBAJ_T0068812.1 MGP_CBAJ_G0028783.1 mouse_genomes_project 4 161902975 161913442 - MGP_CBAJ_P0068812 Fbxo6 protein_coding protein_coding MGP_CBAJ_T0068813.1 MGP_CBAJ_G0028783.1 mouse_genomes_project 4 161903196 161913523 - MGP_CBAJ_P0068813 Fbxo6 protein_coding protein_coding MGP_CBAJ_T0068814.1 MGP_CBAJ_G0028783.1 mouse_genomes_project 4 161903279 161906921 - MGP_CBAJ_P0068814 Fbxo6 protein_coding protein_coding MGP_CBAJ_T0068815.1 MGP_CBAJ_G0028783.1 mouse_genomes_project 4 161903305 161909131 - MGP_CBAJ_P0068815 Fbxo6 protein_coding protein_coding MGP_CBAJ_T0068816.1 MGP_CBAJ_G0028783.1 mouse_genomes_project 4 161906645 161908852 - MGP_CBAJ_P0068816 Fbxo6 protein_coding protein_coding MGP_CBAJ_T0011440.1 MGP_CBAJ_G0009578.1 mouse_genomes_project 4 56965450 56965692 + Gm25687 misc_RNA misc_RNA MGP_CBAJ_T0014377.1 MGP_CBAJ_G0012489.1 mouse_genomes_project 4 62041059 62041804 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0069386.1 MGP_CBAJ_G0028885.1 mouse_genomes_project 4 170691329 170694632 - Mib2 protein_coding processed_transcript MGP_CBAJ_T0069387.1 MGP_CBAJ_G0028885.1 mouse_genomes_project 4 170691334 170703746 - Mib2 protein_coding processed_transcript MGP_CBAJ_T0069388.1 MGP_CBAJ_G0028885.1 mouse_genomes_project 4 170691334 170705837 - MGP_CBAJ_P0069388 Mib2 protein_coding protein_coding MGP_CBAJ_T0069389.1 MGP_CBAJ_G0028885.1 mouse_genomes_project 4 170691335 170693380 - Mib2 protein_coding processed_transcript MGP_CBAJ_T0069390.1 MGP_CBAJ_G0028885.1 mouse_genomes_project 4 170692490 170693380 - Mib2 protein_coding processed_transcript MGP_CBAJ_T0069391.1 MGP_CBAJ_G0028885.1 mouse_genomes_project 4 170693595 170696236 - MGP_CBAJ_P0069391 Mib2 protein_coding protein_coding MGP_CBAJ_T0069392.1 MGP_CBAJ_G0028885.1 mouse_genomes_project 4 170694276 170694992 - Mib2 protein_coding processed_transcript MGP_CBAJ_T0069393.1 MGP_CBAJ_G0028885.1 mouse_genomes_project 4 170697972 170705836 - Mib2 protein_coding processed_transcript MGP_CBAJ_T0069394.1 MGP_CBAJ_G0028885.1 mouse_genomes_project 4 170703683 170705832 - Mib2 protein_coding processed_transcript MGP_CBAJ_T0004381.1 MGP_CBAJ_G0003816.1 mouse_genomes_project 4 78708143 78709515 - A230083N12Rik antisense antisense MGP_CBAJ_T0014547.1 MGP_CBAJ_G0012659.1 mouse_genomes_project 4 130786526 130786854 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001392.1 MGP_CBAJ_G0001316.1 mouse_genomes_project 4 158171908 158173602 - TEC TEC MGP_CBAJ_T0010524.1 MGP_CBAJ_G0008662.1 mouse_genomes_project 4 153773164 153773241 + Gm25690 miRNA miRNA MGP_CBAJ_T0067055.1 MGP_CBAJ_G0028357.1 mouse_genomes_project 4 128338706 128354287 - MGP_CBAJ_P0067055 4930538K18Rik protein_coding protein_coding MGP_CBAJ_T0014253.1 MGP_CBAJ_G0012365.1 mouse_genomes_project 4 19959367 19960166 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0069483.1 MGP_CBAJ_G0028905.1 mouse_genomes_project 4 171078025 171081179 - MGP_CBAJ_P0069483 B3galt6 protein_coding protein_coding MGP_CBAJ_T0065132.1 MGP_CBAJ_G0027906.1 mouse_genomes_project 4 46441515 46539558 + MGP_CBAJ_P0065132 Frmpd1 protein_coding protein_coding MGP_CBAJ_T0065133.1 MGP_CBAJ_G0027906.1 mouse_genomes_project 4 46441546 46563565 + MGP_CBAJ_P0065133 Frmpd1 protein_coding protein_coding MGP_CBAJ_T0065134.1 MGP_CBAJ_G0027906.1 mouse_genomes_project 4 46464796 46563565 + MGP_CBAJ_P0065134 Frmpd1 protein_coding protein_coding MGP_CBAJ_T0067427.1 MGP_CBAJ_G0028449.1 mouse_genomes_project 4 136567124 136576810 - MGP_CBAJ_P0067427 Ncdn protein_coding protein_coding MGP_CBAJ_T0067428.1 MGP_CBAJ_G0028449.1 mouse_genomes_project 4 136568105 136576839 - Ncdn protein_coding processed_transcript MGP_CBAJ_T0067429.1 MGP_CBAJ_G0028449.1 mouse_genomes_project 4 136568105 136576828 - MGP_CBAJ_P0067429 Ncdn protein_coding protein_coding MGP_CBAJ_T0066060.1 MGP_CBAJ_G0028143.1 mouse_genomes_project 4 106479402 106480827 + MGP_CBAJ_P0066060 Gm12689 protein_coding protein_coding MGP_CBAJ_T0014438.1 MGP_CBAJ_G0012550.1 mouse_genomes_project 4 93572690 93575511 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014280.1 MGP_CBAJ_G0012392.1 mouse_genomes_project 4 27142822 27143845 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014404.1 MGP_CBAJ_G0012516.1 mouse_genomes_project 4 79169712 79170365 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014458.1 MGP_CBAJ_G0012570.1 mouse_genomes_project 4 101043908 101044496 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0069484.1 MGP_CBAJ_G0028906.1 mouse_genomes_project 4 171081369 171104007 + MGP_CBAJ_P0069484 Sdf4 protein_coding protein_coding MGP_CBAJ_T0069485.1 MGP_CBAJ_G0028906.1 mouse_genomes_project 4 171081408 171107368 + MGP_CBAJ_P0069485 Sdf4 protein_coding protein_coding MGP_CBAJ_T0069486.1 MGP_CBAJ_G0028906.1 mouse_genomes_project 4 171081667 171093317 + MGP_CBAJ_P0069486 Sdf4 protein_coding protein_coding MGP_CBAJ_T0069487.1 MGP_CBAJ_G0028906.1 mouse_genomes_project 4 171081874 171104115 + MGP_CBAJ_P0069487 Sdf4 protein_coding protein_coding MGP_CBAJ_T0069488.1 MGP_CBAJ_G0028906.1 mouse_genomes_project 4 171090004 171091542 + Sdf4 protein_coding retained_intron MGP_CBAJ_T0069489.1 MGP_CBAJ_G0028906.1 mouse_genomes_project 4 171102306 171103654 + Sdf4 protein_coding retained_intron MGP_CBAJ_T0067761.1 MGP_CBAJ_G0028516.1 mouse_genomes_project 4 141130434 141167534 + MGP_CBAJ_P0067761 Sdc3 protein_coding protein_coding MGP_CBAJ_T0067762.1 MGP_CBAJ_G0028516.1 mouse_genomes_project 4 141130601 141158488 + Sdc3 protein_coding retained_intron MGP_CBAJ_T0067763.1 MGP_CBAJ_G0028516.1 mouse_genomes_project 4 141149792 141160274 + MGP_CBAJ_P0067763 Sdc3 protein_coding protein_coding MGP_CBAJ_T0067764.1 MGP_CBAJ_G0028516.1 mouse_genomes_project 4 141155520 141160274 + MGP_CBAJ_P0067764 Sdc3 protein_coding protein_coding MGP_CBAJ_T0067765.1 MGP_CBAJ_G0028516.1 mouse_genomes_project 4 141158059 141163465 + Sdc3 protein_coding retained_intron MGP_CBAJ_T0014353.1 MGP_CBAJ_G0012465.1 mouse_genomes_project 4 54499706 54500446 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0065219.1 MGP_CBAJ_G0027927.1 mouse_genomes_project 4 47991646 48027673 - MGP_CBAJ_P0065219 Coro2a protein_coding protein_coding MGP_CBAJ_T0065220.1 MGP_CBAJ_G0027927.1 mouse_genomes_project 4 47991652 48067957 - MGP_CBAJ_P0065220 Coro2a protein_coding protein_coding MGP_CBAJ_T0065221.1 MGP_CBAJ_G0027927.1 mouse_genomes_project 4 47991652 48027691 - MGP_CBAJ_P0065221 Coro2a protein_coding protein_coding MGP_CBAJ_T0065222.1 MGP_CBAJ_G0027927.1 mouse_genomes_project 4 47995226 47997332 - Coro2a protein_coding processed_transcript MGP_CBAJ_T0065223.1 MGP_CBAJ_G0027927.1 mouse_genomes_project 4 47996184 47997468 - Coro2a protein_coding retained_intron MGP_CBAJ_T0065224.1 MGP_CBAJ_G0027927.1 mouse_genomes_project 4 47997666 48067900 - Coro2a protein_coding retained_intron MGP_CBAJ_T0066955.1 MGP_CBAJ_G0028324.1 mouse_genomes_project 4 126880287 126883888 - MGP_CBAJ_P0066955 Artn protein_coding protein_coding MGP_CBAJ_T0066956.1 MGP_CBAJ_G0028324.1 mouse_genomes_project 4 126880288 126883622 - MGP_CBAJ_P0066956 Artn protein_coding protein_coding MGP_CBAJ_T0066957.1 MGP_CBAJ_G0028324.1 mouse_genomes_project 4 126882166 126883602 - Artn protein_coding processed_transcript MGP_CBAJ_T0066958.1 MGP_CBAJ_G0028324.1 mouse_genomes_project 4 126882268 126883538 - Artn protein_coding processed_transcript MGP_CBAJ_T0014263.1 MGP_CBAJ_G0012375.1 mouse_genomes_project 4 22221609 22222026 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014272.1 MGP_CBAJ_G0012384.1 mouse_genomes_project 4 24637473 24637940 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065325.1 MGP_CBAJ_G0027956.1 mouse_genomes_project 4 54720082 54773574 + MGP_CBAJ_P0065325 Smc2 protein_coding protein_coding MGP_CBAJ_T0065326.1 MGP_CBAJ_G0027956.1 mouse_genomes_project 4 54720082 54773574 + MGP_CBAJ_P0065326 Smc2 protein_coding protein_coding MGP_CBAJ_T0065327.1 MGP_CBAJ_G0027956.1 mouse_genomes_project 4 54720091 54728238 + Smc2 protein_coding processed_transcript MGP_CBAJ_T0065328.1 MGP_CBAJ_G0027956.1 mouse_genomes_project 4 54720105 54734111 + Smc2 protein_coding processed_transcript MGP_CBAJ_T0065329.1 MGP_CBAJ_G0027956.1 mouse_genomes_project 4 54720108 54741396 + MGP_CBAJ_P0065329 Smc2 protein_coding protein_coding MGP_CBAJ_T0100562.1 MGP_CBAJ_G0038817.1 mouse_genomes_project 4 101140194 101140295 + Gm22804 snoRNA snoRNA MGP_CBAJ_T0065207.1 MGP_CBAJ_G0027923.1 mouse_genomes_project 4 47822807 47838834 - MGP_CBAJ_P0065207 Hemgn protein_coding protein_coding MGP_CBAJ_T0065208.1 MGP_CBAJ_G0027923.1 mouse_genomes_project 4 47822807 47852431 - MGP_CBAJ_P0065208 Hemgn protein_coding protein_coding MGP_CBAJ_T0014401.1 MGP_CBAJ_G0012513.1 mouse_genomes_project 4 77672461 77673636 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065513.1 MGP_CBAJ_G0028008.1 mouse_genomes_project 4 65136117 65141427 - MGP_CBAJ_P0065513 Mup5 protein_coding protein_coding MGP_CBAJ_T0065814.1 MGP_CBAJ_G0028076.1 mouse_genomes_project 4 92396786 92398405 + MGP_CBAJ_P0065814 Rraga protein_coding protein_coding MGP_CBAJ_T0069069.1 MGP_CBAJ_G0028831.1 mouse_genomes_project 4 166506236 166515172 + MGP_CBAJ_P0069069 Klhl21 protein_coding protein_coding MGP_CBAJ_T0007918.1 MGP_CBAJ_G0006455.1 mouse_genomes_project 4 162100729 162110339 + Gm13206 lincRNA lincRNA MGP_CBAJ_T0069334.1 MGP_CBAJ_G0028876.1 mouse_genomes_project 4 170367584 170380330 - Gabrd protein_coding processed_transcript MGP_CBAJ_T0069335.1 MGP_CBAJ_G0028876.1 mouse_genomes_project 4 170367584 170380395 - MGP_CBAJ_P0069335 Gabrd protein_coding protein_coding MGP_CBAJ_T0069336.1 MGP_CBAJ_G0028876.1 mouse_genomes_project 4 170371169 170380319 - Gabrd protein_coding processed_transcript MGP_CBAJ_T0017815.1 MGP_CBAJ_G0015305.1 mouse_genomes_project 4 111320617 111335409 - Gm12720 processed_transcript processed_transcript MGP_CBAJ_T0004487.1 MGP_CBAJ_G0003895.1 mouse_genomes_project 4 154128508 154130085 + AI507597 antisense antisense MGP_CBAJ_T0004488.1 MGP_CBAJ_G0003895.1 mouse_genomes_project 4 154128837 154130085 + AI507597 antisense antisense MGP_CBAJ_T0007880.1 MGP_CBAJ_G0006427.1 mouse_genomes_project 4 142815649 142822399 + lincRNA lincRNA MGP_CBAJ_T0066313.1 MGP_CBAJ_G0028201.1 mouse_genomes_project 4 115437823 115467257 + MGP_CBAJ_P0066313 Hspb11 protein_coding protein_coding MGP_CBAJ_T0066314.1 MGP_CBAJ_G0028201.1 mouse_genomes_project 4 115438128 115452353 + Hspb11 protein_coding processed_transcript MGP_CBAJ_T0066315.1 MGP_CBAJ_G0028201.1 mouse_genomes_project 4 115438133 115467358 + MGP_CBAJ_P0066315 Hspb11 protein_coding protein_coding MGP_CBAJ_T0066316.1 MGP_CBAJ_G0028201.1 mouse_genomes_project 4 115438155 115467348 + MGP_CBAJ_P0066316 Hspb11 protein_coding protein_coding MGP_CBAJ_T0066317.1 MGP_CBAJ_G0028201.1 mouse_genomes_project 4 115447494 115467352 + Hspb11 protein_coding processed_transcript MGP_CBAJ_T0017825.1 MGP_CBAJ_G0015311.1 mouse_genomes_project 4 125345364 125353131 - C530005A16Rik processed_transcript processed_transcript MGP_CBAJ_T0068649.1 MGP_CBAJ_G0028717.1 mouse_genomes_project 4 154228161 154236345 - MGP_CBAJ_P0068649 protein_coding protein_coding MGP_CBAJ_T0067207.1 MGP_CBAJ_G0028395.1 mouse_genomes_project 4 132503020 132551211 + Trit1 protein_coding processed_transcript MGP_CBAJ_T0067208.1 MGP_CBAJ_G0028395.1 mouse_genomes_project 4 132503020 132551211 + MGP_CBAJ_P0067208 Trit1 protein_coding protein_coding MGP_CBAJ_T0067209.1 MGP_CBAJ_G0028395.1 mouse_genomes_project 4 132545017 132550465 + Trit1 protein_coding processed_transcript MGP_CBAJ_T0100540.1 MGP_CBAJ_G0038795.1 mouse_genomes_project 4 59395543 59395675 - Gm26144 snoRNA snoRNA MGP_CBAJ_T0014246.1 MGP_CBAJ_G0012358.1 mouse_genomes_project 4 16527080 16529190 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068729.1 MGP_CBAJ_G0028755.1 mouse_genomes_project 4 157512248 157561461 - MGP_CBAJ_P0068729 Pramef12 protein_coding protein_coding MGP_CBAJ_T0068730.1 MGP_CBAJ_G0028755.1 mouse_genomes_project 4 157515624 157561414 - MGP_CBAJ_P0068730 Pramef12 protein_coding protein_coding MGP_CBAJ_T0014208.1 MGP_CBAJ_G0012320.1 mouse_genomes_project 4 5630722 5631672 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0068202.1 MGP_CBAJ_G0028610.1 mouse_genomes_project 4 147032923 147056979 + MGP_CBAJ_P0068202 Il22ra1 protein_coding protein_coding MGP_CBAJ_T0014446.1 MGP_CBAJ_G0012558.1 mouse_genomes_project 4 96833641 96834265 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017839.1 MGP_CBAJ_G0015319.1 mouse_genomes_project 4 136891949 136897200 + Gm12940 processed_transcript processed_transcript MGP_CBAJ_T0017840.1 MGP_CBAJ_G0015319.1 mouse_genomes_project 4 136893666 136897200 + Gm12940 processed_transcript processed_transcript MGP_CBAJ_T0017841.1 MGP_CBAJ_G0015319.1 mouse_genomes_project 4 136893896 136913380 + Gm12940 processed_transcript processed_transcript MGP_CBAJ_T0017842.1 MGP_CBAJ_G0015319.1 mouse_genomes_project 4 136895968 136897138 + Gm12940 processed_transcript processed_transcript MGP_CBAJ_T0014485.1 MGP_CBAJ_G0012597.1 mouse_genomes_project 4 111763462 111764445 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101887.1 MGP_CBAJ_G0039918.1 mouse_genomes_project 4 63008766 64956837 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099296.1 MGP_CBAJ_G0037551.1 mouse_genomes_project 4 128712133 128712240 + Rnu6-ps2 snRNA snRNA MGP_CBAJ_T0100547.1 MGP_CBAJ_G0038802.1 mouse_genomes_project 4 67967698 67967827 + Gm23950 snoRNA snoRNA MGP_CBAJ_T0014540.1 MGP_CBAJ_G0012652.1 mouse_genomes_project 4 128705123 128705500 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0066318.1 MGP_CBAJ_G0028202.1 mouse_genomes_project 4 115478843 115496716 - MGP_CBAJ_P0066318 Dio1 protein_coding protein_coding MGP_CBAJ_T0066319.1 MGP_CBAJ_G0028202.1 mouse_genomes_project 4 115479545 115496689 - MGP_CBAJ_P0066319 Dio1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066320.1 MGP_CBAJ_G0028202.1 mouse_genomes_project 4 115479708 115496671 - MGP_CBAJ_P0066320 Dio1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066321.1 MGP_CBAJ_G0028202.1 mouse_genomes_project 4 115479712 115496671 - MGP_CBAJ_P0066321 Dio1 protein_coding protein_coding MGP_CBAJ_T0066322.1 MGP_CBAJ_G0028202.1 mouse_genomes_project 4 115479742 115496665 - MGP_CBAJ_P0066322 Dio1 protein_coding protein_coding MGP_CBAJ_T0066323.1 MGP_CBAJ_G0028202.1 mouse_genomes_project 4 115479742 115496665 - MGP_CBAJ_P0066323 Dio1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066324.1 MGP_CBAJ_G0028202.1 mouse_genomes_project 4 115479742 115496665 - MGP_CBAJ_P0066324 Dio1 protein_coding protein_coding MGP_CBAJ_T0066325.1 MGP_CBAJ_G0028202.1 mouse_genomes_project 4 115489394 115496613 - Dio1 protein_coding processed_transcript MGP_CBAJ_T0068947.1 MGP_CBAJ_G0028808.1 mouse_genomes_project 4 163721451 163778036 - MGP_CBAJ_P0068947 Pik3cd protein_coding protein_coding MGP_CBAJ_T0068948.1 MGP_CBAJ_G0028808.1 mouse_genomes_project 4 163721451 163778026 - MGP_CBAJ_P0068948 Pik3cd protein_coding protein_coding MGP_CBAJ_T0068949.1 MGP_CBAJ_G0028808.1 mouse_genomes_project 4 163721453 163750082 - MGP_CBAJ_P0068949 Pik3cd protein_coding protein_coding MGP_CBAJ_T0068950.1 MGP_CBAJ_G0028808.1 mouse_genomes_project 4 163721453 163780918 - MGP_CBAJ_P0068950 Pik3cd protein_coding protein_coding MGP_CBAJ_T0068951.1 MGP_CBAJ_G0028808.1 mouse_genomes_project 4 163721454 163751932 - MGP_CBAJ_P0068951 Pik3cd protein_coding protein_coding MGP_CBAJ_T0068952.1 MGP_CBAJ_G0028808.1 mouse_genomes_project 4 163722100 163777933 - MGP_CBAJ_P0068952 Pik3cd protein_coding protein_coding MGP_CBAJ_T0068953.1 MGP_CBAJ_G0028808.1 mouse_genomes_project 4 163722923 163736616 - MGP_CBAJ_P0068953 Pik3cd protein_coding protein_coding MGP_CBAJ_T0068954.1 MGP_CBAJ_G0028808.1 mouse_genomes_project 4 163733129 163751074 - MGP_CBAJ_P0068954 Pik3cd protein_coding protein_coding MGP_CBAJ_T0068955.1 MGP_CBAJ_G0028808.1 mouse_genomes_project 4 163733208 163751513 - MGP_CBAJ_P0068955 Pik3cd protein_coding protein_coding MGP_CBAJ_T0068956.1 MGP_CBAJ_G0028808.1 mouse_genomes_project 4 163733370 163777932 - MGP_CBAJ_P0068956 Pik3cd protein_coding protein_coding MGP_CBAJ_T0068957.1 MGP_CBAJ_G0028808.1 mouse_genomes_project 4 163733535 163777880 - MGP_CBAJ_P0068957 Pik3cd protein_coding protein_coding MGP_CBAJ_T0068958.1 MGP_CBAJ_G0028808.1 mouse_genomes_project 4 163736484 163781899 - MGP_CBAJ_P0068958 Pik3cd protein_coding protein_coding MGP_CBAJ_T0068959.1 MGP_CBAJ_G0028808.1 mouse_genomes_project 4 163749326 163751981 - Pik3cd protein_coding processed_transcript MGP_CBAJ_T0068960.1 MGP_CBAJ_G0028808.1 mouse_genomes_project 4 163749652 163780918 - Pik3cd protein_coding processed_transcript MGP_CBAJ_T0065791.1 MGP_CBAJ_G0028072.1 mouse_genomes_project 4 90522435 90795628 + MGP_CBAJ_P0065791 Cntln protein_coding protein_coding MGP_CBAJ_T0065792.1 MGP_CBAJ_G0028072.1 mouse_genomes_project 4 90522530 90602566 + MGP_CBAJ_P0065792 Cntln protein_coding protein_coding MGP_CBAJ_T0065793.1 MGP_CBAJ_G0028072.1 mouse_genomes_project 4 90522591 90795624 + MGP_CBAJ_P0065793 Cntln protein_coding protein_coding MGP_CBAJ_T0065794.1 MGP_CBAJ_G0028072.1 mouse_genomes_project 4 90756636 90795625 + MGP_CBAJ_P0065794 Cntln protein_coding protein_coding MGP_CBAJ_T0067977.1 MGP_CBAJ_G0028562.1 mouse_genomes_project 4 144411530 144422018 + MGP_CBAJ_P0067977 Gpn2 protein_coding protein_coding MGP_CBAJ_T0067978.1 MGP_CBAJ_G0028562.1 mouse_genomes_project 4 144411587 144421768 + MGP_CBAJ_P0067978 Gpn2 protein_coding protein_coding MGP_CBAJ_T0067979.1 MGP_CBAJ_G0028562.1 mouse_genomes_project 4 144411596 144416427 + Gpn2 protein_coding processed_transcript MGP_CBAJ_T0011427.1 MGP_CBAJ_G0009565.1 mouse_genomes_project 4 9294441 9294757 + Gm22477 misc_RNA misc_RNA MGP_CBAJ_T0066970.1 MGP_CBAJ_G0028327.1 mouse_genomes_project 4 127199273 127286252 - MGP_CBAJ_P0066970 Ptprf protein_coding protein_coding MGP_CBAJ_T0066971.1 MGP_CBAJ_G0028327.1 mouse_genomes_project 4 127199280 127286068 - MGP_CBAJ_P0066971 Ptprf protein_coding unknown_likely_coding MGP_CBAJ_T0066972.1 MGP_CBAJ_G0028327.1 mouse_genomes_project 4 127200048 127208739 - Ptprf protein_coding processed_transcript MGP_CBAJ_T0066973.1 MGP_CBAJ_G0028327.1 mouse_genomes_project 4 127200064 127227522 - MGP_CBAJ_P0066973 Ptprf protein_coding protein_coding MGP_CBAJ_T0066974.1 MGP_CBAJ_G0028327.1 mouse_genomes_project 4 127200069 127227093 - MGP_CBAJ_P0066974 Ptprf protein_coding protein_coding MGP_CBAJ_T0066975.1 MGP_CBAJ_G0028327.1 mouse_genomes_project 4 127200919 127201801 - Ptprf protein_coding processed_transcript MGP_CBAJ_T0066976.1 MGP_CBAJ_G0028327.1 mouse_genomes_project 4 127217189 127222154 - Ptprf protein_coding processed_transcript MGP_CBAJ_T0007747.1 MGP_CBAJ_G0006326.1 mouse_genomes_project 4 57151842 57182982 + Gm12478 lincRNA lincRNA MGP_CBAJ_T0064382.1 MGP_CBAJ_G0027748.1 mouse_genomes_project 4 13875767 13920462 - MGP_CBAJ_P0064382 Ripk2 protein_coding protein_coding MGP_CBAJ_T0064383.1 MGP_CBAJ_G0027748.1 mouse_genomes_project 4 13875775 13920458 - MGP_CBAJ_P0064383 Ripk2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064400.1 MGP_CBAJ_G0027757.1 mouse_genomes_project 4 18078406 18127259 - MGP_CBAJ_P0064400 Atp6v0d2 protein_coding protein_coding MGP_CBAJ_T0064401.1 MGP_CBAJ_G0027757.1 mouse_genomes_project 4 18092411 18121601 - MGP_CBAJ_P0064401 Atp6v0d2 protein_coding protein_coding MGP_CBAJ_T0067475.1 MGP_CBAJ_G0028458.1 mouse_genomes_project 4 137242094 137244713 - MGP_CBAJ_P0067475 Gja4 protein_coding protein_coding MGP_CBAJ_T0014506.1 MGP_CBAJ_G0012618.1 mouse_genomes_project 4 118278220 118278624 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099266.1 MGP_CBAJ_G0037521.1 mouse_genomes_project 4 67073625 67073732 - Gm24234 snRNA snRNA MGP_CBAJ_T0066817.1 MGP_CBAJ_G0028299.1 mouse_genomes_project 4 125614976 125626398 + MGP_CBAJ_P0066817 Mutyh protein_coding protein_coding MGP_CBAJ_T0066818.1 MGP_CBAJ_G0028299.1 mouse_genomes_project 4 125614978 125622667 + MGP_CBAJ_P0066818 Mutyh protein_coding protein_coding MGP_CBAJ_T0066819.1 MGP_CBAJ_G0028299.1 mouse_genomes_project 4 125614991 125626405 + Mutyh protein_coding retained_intron MGP_CBAJ_T0066820.1 MGP_CBAJ_G0028299.1 mouse_genomes_project 4 125615001 125625735 + Mutyh protein_coding retained_intron MGP_CBAJ_T0066821.1 MGP_CBAJ_G0028299.1 mouse_genomes_project 4 125621391 125626350 + MGP_CBAJ_P0066821 Mutyh protein_coding nonsense_mediated_decay MGP_CBAJ_T0066822.1 MGP_CBAJ_G0028299.1 mouse_genomes_project 4 125621449 125624003 + Mutyh protein_coding retained_intron MGP_CBAJ_T0066823.1 MGP_CBAJ_G0028299.1 mouse_genomes_project 4 125624661 125626407 + Mutyh protein_coding retained_intron MGP_CBAJ_T0064666.1 MGP_CBAJ_G0027817.1 mouse_genomes_project 4 41407640 41436531 - MGP_CBAJ_P0064666 Smu1 protein_coding protein_coding MGP_CBAJ_T0064667.1 MGP_CBAJ_G0027817.1 mouse_genomes_project 4 41414681 41436491 - Smu1 protein_coding processed_transcript MGP_CBAJ_T0064668.1 MGP_CBAJ_G0027817.1 mouse_genomes_project 4 41430769 41436439 - Smu1 protein_coding processed_transcript MGP_CBAJ_T0064669.1 MGP_CBAJ_G0027817.1 mouse_genomes_project 4 41432049 41436006 - Smu1 protein_coding processed_transcript MGP_CBAJ_T0099320.1 MGP_CBAJ_G0037575.1 mouse_genomes_project 4 162372852 162372956 + Gm24002 snRNA snRNA MGP_CBAJ_T0064934.1 MGP_CBAJ_G0027870.1 mouse_genomes_project 4 44423315 44431472 - MGP_CBAJ_P0064934 Cd72 protein_coding protein_coding MGP_CBAJ_T0064935.1 MGP_CBAJ_G0027870.1 mouse_genomes_project 4 44424577 44431408 - MGP_CBAJ_P0064935 Cd72 protein_coding protein_coding MGP_CBAJ_T0064936.1 MGP_CBAJ_G0027870.1 mouse_genomes_project 4 44424577 44431429 - MGP_CBAJ_P0064936 Cd72 protein_coding protein_coding MGP_CBAJ_T0064937.1 MGP_CBAJ_G0027870.1 mouse_genomes_project 4 44424577 44431473 - MGP_CBAJ_P0064937 Cd72 protein_coding protein_coding MGP_CBAJ_T0064938.1 MGP_CBAJ_G0027870.1 mouse_genomes_project 4 44424588 44431471 - MGP_CBAJ_P0064938 Cd72 protein_coding protein_coding MGP_CBAJ_T0064939.1 MGP_CBAJ_G0027870.1 mouse_genomes_project 4 44424883 44426787 - Cd72 protein_coding retained_intron MGP_CBAJ_T0064940.1 MGP_CBAJ_G0027870.1 mouse_genomes_project 4 44426689 44429219 - Cd72 protein_coding retained_intron MGP_CBAJ_T0064941.1 MGP_CBAJ_G0027870.1 mouse_genomes_project 4 44429156 44431457 - Cd72 protein_coding retained_intron MGP_CBAJ_T0064942.1 MGP_CBAJ_G0027870.1 mouse_genomes_project 4 44429167 44431168 - Cd72 protein_coding processed_transcript MGP_CBAJ_T0064943.1 MGP_CBAJ_G0027870.1 mouse_genomes_project 4 44429447 44431471 - Cd72 protein_coding processed_transcript MGP_CBAJ_T0014545.1 MGP_CBAJ_G0012657.1 mouse_genomes_project 4 130607371 130607744 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011448.1 MGP_CBAJ_G0009586.1 mouse_genomes_project 4 109031970 109032244 + Gm22533 misc_RNA misc_RNA MGP_CBAJ_T0014431.1 MGP_CBAJ_G0012543.1 mouse_genomes_project 4 89171585 89172048 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0065887.1 MGP_CBAJ_G0028103.1 mouse_genomes_project 4 95320725 95378693 + MGP_CBAJ_P0065887 Mtap protein_coding protein_coding MGP_CBAJ_T0065888.1 MGP_CBAJ_G0028103.1 mouse_genomes_project 4 95373975 95377086 + Mtap protein_coding processed_transcript MGP_CBAJ_T0065629.1 MGP_CBAJ_G0028044.1 mouse_genomes_project 4 70504538 70519755 + MGP_CBAJ_P0065629 Tlr4 protein_coding protein_coding MGP_CBAJ_T0065630.1 MGP_CBAJ_G0028044.1 mouse_genomes_project 4 70504567 70609901 + MGP_CBAJ_P0065630 Tlr4 protein_coding protein_coding MGP_CBAJ_T0065631.1 MGP_CBAJ_G0028044.1 mouse_genomes_project 4 70504573 70516384 + Tlr4 protein_coding processed_transcript MGP_CBAJ_T0065632.1 MGP_CBAJ_G0028044.1 mouse_genomes_project 4 70505156 70516573 + Tlr4 protein_coding processed_transcript MGP_CBAJ_T0014312.1 MGP_CBAJ_G0012424.1 mouse_genomes_project 4 36587848 36588654 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0069493.1 MGP_CBAJ_G0028908.1 mouse_genomes_project 4 171119711 171122439 + MGP_CBAJ_P0069493 Tnfrsf18 protein_coding protein_coding MGP_CBAJ_T0069494.1 MGP_CBAJ_G0028908.1 mouse_genomes_project 4 171119879 171122435 + Tnfrsf18 protein_coding retained_intron MGP_CBAJ_T0069495.1 MGP_CBAJ_G0028908.1 mouse_genomes_project 4 171119889 171122435 + MGP_CBAJ_P0069495 Tnfrsf18 protein_coding protein_coding MGP_CBAJ_T0069496.1 MGP_CBAJ_G0028908.1 mouse_genomes_project 4 171119889 171122435 + MGP_CBAJ_P0069496 Tnfrsf18 protein_coding protein_coding MGP_CBAJ_T0069497.1 MGP_CBAJ_G0028908.1 mouse_genomes_project 4 171119925 171121919 + Tnfrsf18 protein_coding processed_transcript MGP_CBAJ_T0069498.1 MGP_CBAJ_G0028908.1 mouse_genomes_project 4 171121915 171122439 + Tnfrsf18 protein_coding processed_transcript MGP_CBAJ_T0065225.1 MGP_CBAJ_G0027928.1 mouse_genomes_project 4 48074397 48120000 - MGP_CBAJ_P0065225 Tbc1d2 protein_coding protein_coding MGP_CBAJ_T0065226.1 MGP_CBAJ_G0027928.1 mouse_genomes_project 4 48102579 48120000 - MGP_CBAJ_P0065226 Tbc1d2 protein_coding protein_coding MGP_CBAJ_T0064363.1 MGP_CBAJ_G0027740.1 mouse_genomes_project 4 12383180 12408341 - MGP_CBAJ_P0064363 Otud6b protein_coding protein_coding MGP_CBAJ_T0067747.1 MGP_CBAJ_G0028513.1 mouse_genomes_project 4 140820513 140854205 + MGP_CBAJ_P0067747 Snrnp40 protein_coding protein_coding MGP_CBAJ_T0067748.1 MGP_CBAJ_G0028513.1 mouse_genomes_project 4 140820575 140839754 + Snrnp40 protein_coding processed_transcript MGP_CBAJ_T0067749.1 MGP_CBAJ_G0028513.1 mouse_genomes_project 4 140823008 140825814 + Snrnp40 protein_coding processed_transcript MGP_CBAJ_T0067750.1 MGP_CBAJ_G0028513.1 mouse_genomes_project 4 140849199 140852807 + Snrnp40 protein_coding processed_transcript MGP_CBAJ_T0100564.1 MGP_CBAJ_G0038819.1 mouse_genomes_project 4 111371399 111371528 - Gm25877 snoRNA snoRNA MGP_CBAJ_T0004489.1 MGP_CBAJ_G0003896.1 mouse_genomes_project 4 154414943 154417604 + Ctrcos antisense antisense MGP_CBAJ_T0100582.1 MGP_CBAJ_G0038837.1 mouse_genomes_project 4 141108713 141108796 + Gm23711 snoRNA snoRNA MGP_CBAJ_T0014320.1 MGP_CBAJ_G0012432.1 mouse_genomes_project 4 40408477 40409396 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014388.1 MGP_CBAJ_G0012500.1 mouse_genomes_project 4 71253406 71254033 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097815.1 MGP_CBAJ_G0036088.1 mouse_genomes_project 4 105800942 105801030 + pseudogene pseudogene MGP_CBAJ_T0068733.1 MGP_CBAJ_G0028758.1 mouse_genomes_project 4 157612382 157622368 - MGP_CBAJ_P0068733 Aadacl3 protein_coding protein_coding MGP_CBAJ_T0004406.1 MGP_CBAJ_G0003831.1 mouse_genomes_project 4 110705340 110715725 - BB031773 antisense antisense MGP_CBAJ_T0017862.1 MGP_CBAJ_G0015330.1 mouse_genomes_project 4 171148929 171156058 - Gm13648 processed_transcript processed_transcript MGP_CBAJ_T0100528.1 MGP_CBAJ_G0038783.1 mouse_genomes_project 4 41988832 41988910 - Gm23090 snoRNA snoRNA MGP_CBAJ_T0101906.1 MGP_CBAJ_G0039937.1 mouse_genomes_project 4 123516401 123535390 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0068052.1 MGP_CBAJ_G0028574.1 mouse_genomes_project 4 145088465 145089849 - MGP_CBAJ_P0068052 Sh3bgrl3 protein_coding protein_coding MGP_CBAJ_T0068053.1 MGP_CBAJ_G0028574.1 mouse_genomes_project 4 145088472 145089799 - MGP_CBAJ_P0068053 Sh3bgrl3 protein_coding protein_coding MGP_CBAJ_T0068054.1 MGP_CBAJ_G0028574.1 mouse_genomes_project 4 145088899 145089797 - Sh3bgrl3 protein_coding retained_intron MGP_CBAJ_T0067406.1 MGP_CBAJ_G0028443.1 mouse_genomes_project 4 136205968 136239533 - MGP_CBAJ_P0067406 Ago1 protein_coding protein_coding MGP_CBAJ_T0067407.1 MGP_CBAJ_G0028443.1 mouse_genomes_project 4 136209277 136232735 - MGP_CBAJ_P0067407 Ago1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067408.1 MGP_CBAJ_G0028443.1 mouse_genomes_project 4 136210459 136230160 - MGP_CBAJ_P0067408 Ago1 protein_coding protein_coding MGP_CBAJ_T0067409.1 MGP_CBAJ_G0028443.1 mouse_genomes_project 4 136213556 136214318 - Ago1 protein_coding retained_intron MGP_CBAJ_T0067410.1 MGP_CBAJ_G0028443.1 mouse_genomes_project 4 136230267 136231078 - Ago1 protein_coding retained_intron MGP_CBAJ_T0068736.1 MGP_CBAJ_G0028761.1 mouse_genomes_project 4 157805710 157815396 + MGP_CBAJ_P0068736 Gm13177 protein_coding protein_coding MGP_CBAJ_T0064736.1 MGP_CBAJ_G0027835.1 mouse_genomes_project 4 42382658 42457238 + MGP_CBAJ_P0064736 Dnaic1 protein_coding protein_coding MGP_CBAJ_T0064737.1 MGP_CBAJ_G0027835.1 mouse_genomes_project 4 42450722 42457238 + Dnaic1 protein_coding retained_intron MGP_CBAJ_T0064738.1 MGP_CBAJ_G0027835.1 mouse_genomes_project 4 42452427 42457238 + MGP_CBAJ_P0064738 Dnaic1 protein_coding protein_coding MGP_CBAJ_T0099325.1 MGP_CBAJ_G0037580.1 mouse_genomes_project 4 170759571 170759673 - Gm22573 snRNA snRNA MGP_CBAJ_T0068932.1 MGP_CBAJ_G0028804.1 mouse_genomes_project 4 163516327 163537973 - MGP_CBAJ_P0068932 Nmnat1 protein_coding protein_coding MGP_CBAJ_T0068933.1 MGP_CBAJ_G0028804.1 mouse_genomes_project 4 163517267 163537969 - MGP_CBAJ_P0068933 Nmnat1 protein_coding protein_coding MGP_CBAJ_T0068934.1 MGP_CBAJ_G0028804.1 mouse_genomes_project 4 163517307 163537943 - MGP_CBAJ_P0068934 Nmnat1 protein_coding protein_coding MGP_CBAJ_T0068935.1 MGP_CBAJ_G0028804.1 mouse_genomes_project 4 163526925 163537934 - MGP_CBAJ_P0068935 Nmnat1 protein_coding protein_coding MGP_CBAJ_T0100537.1 MGP_CBAJ_G0038792.1 mouse_genomes_project 4 56458867 56458998 + Gm24177 snoRNA snoRNA MGP_CBAJ_T0014427.1 MGP_CBAJ_G0012539.1 mouse_genomes_project 4 87078659 87079374 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0064579.1 MGP_CBAJ_G0027798.1 mouse_genomes_project 4 34517865 34563057 + MGP_CBAJ_P0064579 Rars2 protein_coding protein_coding MGP_CBAJ_T0064580.1 MGP_CBAJ_G0027798.1 mouse_genomes_project 4 34517869 34521814 + Rars2 protein_coding processed_transcript MGP_CBAJ_T0064581.1 MGP_CBAJ_G0027798.1 mouse_genomes_project 4 34517877 34528319 + Rars2 protein_coding processed_transcript MGP_CBAJ_T0064582.1 MGP_CBAJ_G0027798.1 mouse_genomes_project 4 34517882 34563053 + Rars2 protein_coding processed_transcript MGP_CBAJ_T0064583.1 MGP_CBAJ_G0027798.1 mouse_genomes_project 4 34517884 34533444 + MGP_CBAJ_P0064583 Rars2 protein_coding protein_coding MGP_CBAJ_T0064584.1 MGP_CBAJ_G0027798.1 mouse_genomes_project 4 34517886 34526311 + Rars2 protein_coding processed_transcript MGP_CBAJ_T0064585.1 MGP_CBAJ_G0027798.1 mouse_genomes_project 4 34550589 34559051 + Rars2 protein_coding processed_transcript MGP_CBAJ_T0014231.1 MGP_CBAJ_G0012343.1 mouse_genomes_project 4 13524393 13548281 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099304.1 MGP_CBAJ_G0037559.1 mouse_genomes_project 4 139685270 139685410 + Gm24621 snRNA snRNA MGP_CBAJ_T0069012.1 MGP_CBAJ_G0028821.1 mouse_genomes_project 4 165245060 165267174 - MGP_CBAJ_P0069012 Park7 protein_coding protein_coding MGP_CBAJ_T0069013.1 MGP_CBAJ_G0028821.1 mouse_genomes_project 4 165245060 165259772 - MGP_CBAJ_P0069013 Park7 protein_coding protein_coding MGP_CBAJ_T0069014.1 MGP_CBAJ_G0028821.1 mouse_genomes_project 4 165245072 165259472 - MGP_CBAJ_P0069014 Park7 protein_coding protein_coding MGP_CBAJ_T0069015.1 MGP_CBAJ_G0028821.1 mouse_genomes_project 4 165245163 165258253 - MGP_CBAJ_P0069015 Park7 protein_coding protein_coding MGP_CBAJ_T0069016.1 MGP_CBAJ_G0028821.1 mouse_genomes_project 4 165245166 165259497 - MGP_CBAJ_P0069016 Park7 protein_coding protein_coding MGP_CBAJ_T0069017.1 MGP_CBAJ_G0028821.1 mouse_genomes_project 4 165245311 165249793 - Park7 protein_coding processed_transcript MGP_CBAJ_T0069018.1 MGP_CBAJ_G0028821.1 mouse_genomes_project 4 165248963 165259329 - MGP_CBAJ_P0069018 Park7 protein_coding protein_coding MGP_CBAJ_T0069019.1 MGP_CBAJ_G0028821.1 mouse_genomes_project 4 165251521 165259674 - Park7 protein_coding retained_intron MGP_CBAJ_T0069020.1 MGP_CBAJ_G0028821.1 mouse_genomes_project 4 165254959 165259714 - MGP_CBAJ_P0069020 Park7 protein_coding protein_coding MGP_CBAJ_T0069021.1 MGP_CBAJ_G0028821.1 mouse_genomes_project 4 165255083 165266943 - MGP_CBAJ_P0069021 Park7 protein_coding protein_coding MGP_CBAJ_T0066626.1 MGP_CBAJ_G0028258.1 mouse_genomes_project 4 123422630 123440212 + MGP_CBAJ_P0066626 Tal1 protein_coding protein_coding MGP_CBAJ_T0066627.1 MGP_CBAJ_G0028258.1 mouse_genomes_project 4 123423642 123429763 + MGP_CBAJ_P0066627 Tal1 protein_coding protein_coding MGP_CBAJ_T0066628.1 MGP_CBAJ_G0028258.1 mouse_genomes_project 4 123424015 123439684 + MGP_CBAJ_P0066628 Tal1 protein_coding protein_coding MGP_CBAJ_T0066629.1 MGP_CBAJ_G0028258.1 mouse_genomes_project 4 123425712 123438486 + MGP_CBAJ_P0066629 Tal1 protein_coding protein_coding MGP_CBAJ_T0067802.1 MGP_CBAJ_G0028522.1 mouse_genomes_project 4 142405475 142406845 + MGP_CBAJ_P0067802 Tmem200b protein_coding protein_coding MGP_CBAJ_T0067988.1 MGP_CBAJ_G0028565.1 mouse_genomes_project 4 144543228 144626935 - MGP_CBAJ_P0067988 Arid1a protein_coding protein_coding MGP_CBAJ_T0067989.1 MGP_CBAJ_G0028565.1 mouse_genomes_project 4 144543228 144626935 - MGP_CBAJ_P0067989 Arid1a protein_coding protein_coding MGP_CBAJ_T0067990.1 MGP_CBAJ_G0028565.1 mouse_genomes_project 4 144544163 144633127 - MGP_CBAJ_P0067990 Arid1a protein_coding protein_coding MGP_CBAJ_T0067991.1 MGP_CBAJ_G0028565.1 mouse_genomes_project 4 144553694 144589489 - Arid1a protein_coding retained_intron MGP_CBAJ_T0067992.1 MGP_CBAJ_G0028565.1 mouse_genomes_project 4 144585783 144587208 - Arid1a protein_coding retained_intron MGP_CBAJ_T0067993.1 MGP_CBAJ_G0028565.1 mouse_genomes_project 4 144587210 144590313 - MGP_CBAJ_P0067993 Arid1a protein_coding protein_coding MGP_CBAJ_T0068223.1 MGP_CBAJ_G0028616.1 mouse_genomes_project 4 147283904 147308550 + MGP_CBAJ_P0068223 Hmgcl protein_coding protein_coding MGP_CBAJ_T0068224.1 MGP_CBAJ_G0028616.1 mouse_genomes_project 4 147283921 147306845 + Hmgcl protein_coding processed_transcript MGP_CBAJ_T0068225.1 MGP_CBAJ_G0028616.1 mouse_genomes_project 4 147286006 147304478 + Hmgcl protein_coding processed_transcript MGP_CBAJ_T0068226.1 MGP_CBAJ_G0028616.1 mouse_genomes_project 4 147305461 147308550 + Hmgcl protein_coding processed_transcript MGP_CBAJ_T0068227.1 MGP_CBAJ_G0028616.1 mouse_genomes_project 4 147306268 147308149 + Hmgcl protein_coding processed_transcript MGP_CBAJ_T0014572.1 MGP_CBAJ_G0012684.1 mouse_genomes_project 4 142596750 142597158 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004439.1 MGP_CBAJ_G0003857.1 mouse_genomes_project 4 129534669 129546778 + Foxo6os antisense antisense MGP_CBAJ_T0099244.1 MGP_CBAJ_G0037499.1 mouse_genomes_project 4 24586949 24587052 - Gm24042 snRNA snRNA MGP_CBAJ_T0004482.1 MGP_CBAJ_G0003891.1 mouse_genomes_project 4 153272496 153286738 - Gm13031 antisense antisense MGP_CBAJ_T0014275.1 MGP_CBAJ_G0012387.1 mouse_genomes_project 4 25431477 25432155 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064614.1 MGP_CBAJ_G0027807.1 mouse_genomes_project 4 35176395 35211383 - MGP_CBAJ_P0064614 3110043O21Rik protein_coding protein_coding MGP_CBAJ_T0064615.1 MGP_CBAJ_G0027807.1 mouse_genomes_project 4 35176400 35211697 - MGP_CBAJ_P0064615 3110043O21Rik protein_coding protein_coding MGP_CBAJ_T0064616.1 MGP_CBAJ_G0027807.1 mouse_genomes_project 4 35182178 35192926 - 3110043O21Rik protein_coding retained_intron MGP_CBAJ_T0064617.1 MGP_CBAJ_G0027807.1 mouse_genomes_project 4 35198053 35211749 - 3110043O21Rik protein_coding retained_intron MGP_CBAJ_T0064618.1 MGP_CBAJ_G0027807.1 mouse_genomes_project 4 35203946 35211697 - 3110043O21Rik protein_coding processed_transcript MGP_CBAJ_T0064619.1 MGP_CBAJ_G0027807.1 mouse_genomes_project 4 35204130 35211697 - 3110043O21Rik protein_coding processed_transcript MGP_CBAJ_T0014424.1 MGP_CBAJ_G0012536.1 mouse_genomes_project 4 85222782 85223925 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0069078.1 MGP_CBAJ_G0028833.1 mouse_genomes_project 4 166525396 166536444 - MGP_CBAJ_P0069078 Tas1r1 protein_coding unknown_likely_coding MGP_CBAJ_T0069079.1 MGP_CBAJ_G0028833.1 mouse_genomes_project 4 166525405 166537598 - MGP_CBAJ_P0069079 Tas1r1 protein_coding protein_coding MGP_CBAJ_T0068407.1 MGP_CBAJ_G0028655.1 mouse_genomes_project 4 150200923 150208747 + MGP_CBAJ_P0068407 Ddost protein_coding protein_coding MGP_CBAJ_T0014337.1 MGP_CBAJ_G0012449.1 mouse_genomes_project 4 47655356 47656233 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101119.1 MGP_CBAJ_G0039315.1 mouse_genomes_project 4 62862368 62862911 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0068692.1 MGP_CBAJ_G0028729.1 mouse_genomes_project 4 156151013 156174928 + MGP_CBAJ_P0068692 Lrrc38 protein_coding protein_coding MGP_CBAJ_T0099264.1 MGP_CBAJ_G0037519.1 mouse_genomes_project 4 65530930 65531037 + Gm23148 snRNA snRNA MGP_CBAJ_T0065980.1 MGP_CBAJ_G0028126.1 mouse_genomes_project 4 103269116 103338448 - MGP_CBAJ_P0065980 Cyp2j8 protein_coding protein_coding MGP_CBAJ_T0068189.1 MGP_CBAJ_G0028606.1 mouse_genomes_project 4 146710713 146764971 - MGP_CBAJ_P0068189 Nipal3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068190.1 MGP_CBAJ_G0028606.1 mouse_genomes_project 4 146711430 146764971 - MGP_CBAJ_P0068190 Nipal3 protein_coding protein_coding MGP_CBAJ_T0068191.1 MGP_CBAJ_G0028606.1 mouse_genomes_project 4 146717448 146765088 - MGP_CBAJ_P0068191 Nipal3 protein_coding protein_coding MGP_CBAJ_T0068192.1 MGP_CBAJ_G0028606.1 mouse_genomes_project 4 146720442 146738473 - MGP_CBAJ_P0068192 Nipal3 protein_coding protein_coding MGP_CBAJ_T0068193.1 MGP_CBAJ_G0028606.1 mouse_genomes_project 4 146720733 146723612 - Nipal3 protein_coding processed_transcript MGP_CBAJ_T0068194.1 MGP_CBAJ_G0028606.1 mouse_genomes_project 4 146720823 146723884 - Nipal3 protein_coding processed_transcript MGP_CBAJ_T0068195.1 MGP_CBAJ_G0028606.1 mouse_genomes_project 4 146743553 146765433 - MGP_CBAJ_P0068195 Nipal3 protein_coding protein_coding MGP_CBAJ_T0068196.1 MGP_CBAJ_G0028606.1 mouse_genomes_project 4 146746782 146765502 - MGP_CBAJ_P0068196 Nipal3 protein_coding protein_coding MGP_CBAJ_T0004411.1 MGP_CBAJ_G0003836.1 mouse_genomes_project 4 115551184 115553514 - Gm12869 antisense antisense MGP_CBAJ_T0068770.1 MGP_CBAJ_G0028772.1 mouse_genomes_project 4 161589121 161590431 + MGP_CBAJ_P0068770 Fv1 protein_coding protein_coding MGP_CBAJ_T0065927.1 MGP_CBAJ_G0028116.1 mouse_genomes_project 4 101436614 101575454 + MGP_CBAJ_P0065927 Tek protein_coding protein_coding MGP_CBAJ_T0065928.1 MGP_CBAJ_G0028116.1 mouse_genomes_project 4 101436625 101575417 + MGP_CBAJ_P0065928 Tek protein_coding protein_coding MGP_CBAJ_T0065929.1 MGP_CBAJ_G0028116.1 mouse_genomes_project 4 101436843 101575160 + MGP_CBAJ_P0065929 Tek protein_coding protein_coding MGP_CBAJ_T0065930.1 MGP_CBAJ_G0028116.1 mouse_genomes_project 4 101505265 101516392 + Tek protein_coding processed_transcript MGP_CBAJ_T0065656.1 MGP_CBAJ_G0028051.1 mouse_genomes_project 4 78081595 78165103 - MGP_CBAJ_P0065656 Rasef protein_coding protein_coding MGP_CBAJ_T0065657.1 MGP_CBAJ_G0028051.1 mouse_genomes_project 4 78081595 78165210 - MGP_CBAJ_P0065657 Rasef protein_coding protein_coding MGP_CBAJ_T0065578.1 MGP_CBAJ_G0028029.1 mouse_genomes_project 4 66593448 66683534 + Col27a1 protein_coding retained_intron MGP_CBAJ_T0065579.1 MGP_CBAJ_G0028029.1 mouse_genomes_project 4 66594856 66665099 + Col27a1 protein_coding retained_intron MGP_CBAJ_T0065580.1 MGP_CBAJ_G0028029.1 mouse_genomes_project 4 66594879 66727972 + MGP_CBAJ_P0065580 Col27a1 protein_coding protein_coding MGP_CBAJ_T0065581.1 MGP_CBAJ_G0028029.1 mouse_genomes_project 4 66595270 66727971 + MGP_CBAJ_P0065581 Col27a1 protein_coding unknown_likely_coding MGP_CBAJ_T0065582.1 MGP_CBAJ_G0028029.1 mouse_genomes_project 4 66613720 66726694 + MGP_CBAJ_P0065582 Col27a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065583.1 MGP_CBAJ_G0028029.1 mouse_genomes_project 4 66672699 66726701 + MGP_CBAJ_P0065583 Col27a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065584.1 MGP_CBAJ_G0028029.1 mouse_genomes_project 4 66673545 66726730 + Col27a1 protein_coding retained_intron MGP_CBAJ_T0065585.1 MGP_CBAJ_G0028029.1 mouse_genomes_project 4 66724025 66727119 + Col27a1 protein_coding processed_transcript MGP_CBAJ_T0014397.1 MGP_CBAJ_G0012509.1 mouse_genomes_project 4 76032049 76033039 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014216.1 MGP_CBAJ_G0012328.1 mouse_genomes_project 4 8383944 8384226 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0067411.1 MGP_CBAJ_G0028444.1 mouse_genomes_project 4 136264133 136319531 - MGP_CBAJ_P0067411 Ago4 protein_coding protein_coding MGP_CBAJ_T0067412.1 MGP_CBAJ_G0028444.1 mouse_genomes_project 4 136299491 136300915 - Ago4 protein_coding processed_transcript MGP_CBAJ_T0004423.1 MGP_CBAJ_G0003842.1 mouse_genomes_project 4 123152867 123243283 - 9130410C08Rik antisense antisense MGP_CBAJ_T0067576.1 MGP_CBAJ_G0028481.1 mouse_genomes_project 4 139467474 139497935 - MGP_CBAJ_P0067576 Rbbp4 protein_coding protein_coding MGP_CBAJ_T0067577.1 MGP_CBAJ_G0028481.1 mouse_genomes_project 4 139469890 139497209 - Rbbp4 protein_coding processed_transcript MGP_CBAJ_T0067578.1 MGP_CBAJ_G0028481.1 mouse_genomes_project 4 139487388 139497814 - Rbbp4 protein_coding retained_intron MGP_CBAJ_T0067579.1 MGP_CBAJ_G0028481.1 mouse_genomes_project 4 139491213 139497648 - MGP_CBAJ_P0067579 Rbbp4 protein_coding protein_coding MGP_CBAJ_T0067585.1 MGP_CBAJ_G0028484.1 mouse_genomes_project 4 139625168 139641935 - MGP_CBAJ_P0067585 Zbtb8b protein_coding protein_coding MGP_CBAJ_T0067586.1 MGP_CBAJ_G0028484.1 mouse_genomes_project 4 139625168 139641900 - MGP_CBAJ_P0067586 Zbtb8b protein_coding protein_coding MGP_CBAJ_T0067587.1 MGP_CBAJ_G0028484.1 mouse_genomes_project 4 139625672 139631933 - Zbtb8b protein_coding processed_transcript MGP_CBAJ_T0067588.1 MGP_CBAJ_G0028484.1 mouse_genomes_project 4 139628548 139641902 - Zbtb8b protein_coding retained_intron MGP_CBAJ_T0067275.1 MGP_CBAJ_G0028412.1 mouse_genomes_project 4 134343063 134358337 - MGP_CBAJ_P0067275 Utp11l protein_coding protein_coding MGP_CBAJ_T0067276.1 MGP_CBAJ_G0028412.1 mouse_genomes_project 4 134343688 134358271 - Utp11l protein_coding processed_transcript MGP_CBAJ_T0065376.1 MGP_CBAJ_G0027972.1 mouse_genomes_project 4 58122494 58138096 - MGP_CBAJ_P0065376 Klf4 protein_coding protein_coding MGP_CBAJ_T0065377.1 MGP_CBAJ_G0027972.1 mouse_genomes_project 4 58133181 58134349 - MGP_CBAJ_P0065377 Klf4 protein_coding protein_coding MGP_CBAJ_T0065378.1 MGP_CBAJ_G0027972.1 mouse_genomes_project 4 58133290 58138083 - MGP_CBAJ_P0065378 Klf4 protein_coding protein_coding MGP_CBAJ_T0001383.1 MGP_CBAJ_G0001308.1 mouse_genomes_project 4 133936317 133937577 - TEC TEC MGP_CBAJ_T0014336.1 MGP_CBAJ_G0012448.1 mouse_genomes_project 4 47102648 47102976 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065658.1 MGP_CBAJ_G0028052.1 mouse_genomes_project 4 78356986 78359375 - 2310002L09Rik protein_coding processed_transcript MGP_CBAJ_T0065659.1 MGP_CBAJ_G0028052.1 mouse_genomes_project 4 78356986 78368420 - MGP_CBAJ_P0065659 2310002L09Rik protein_coding protein_coding MGP_CBAJ_T0065660.1 MGP_CBAJ_G0028052.1 mouse_genomes_project 4 78359152 78368419 - MGP_CBAJ_P0065660 2310002L09Rik protein_coding protein_coding MGP_CBAJ_T0014212.1 MGP_CBAJ_G0012324.1 mouse_genomes_project 4 7602204 7603132 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065961.1 MGP_CBAJ_G0028121.1 mouse_genomes_project 4 102763098 102832125 + MGP_CBAJ_P0065961 Hook1 protein_coding protein_coding MGP_CBAJ_T0065962.1 MGP_CBAJ_G0028121.1 mouse_genomes_project 4 102764819 102822192 + Hook1 protein_coding processed_transcript MGP_CBAJ_T0065963.1 MGP_CBAJ_G0028121.1 mouse_genomes_project 4 102764825 102803412 + MGP_CBAJ_P0065963 Hook1 protein_coding protein_coding MGP_CBAJ_T0065964.1 MGP_CBAJ_G0028121.1 mouse_genomes_project 4 102771842 102829054 + Hook1 protein_coding processed_transcript MGP_CBAJ_T0065965.1 MGP_CBAJ_G0028121.1 mouse_genomes_project 4 102806226 102816237 + Hook1 protein_coding processed_transcript MGP_CBAJ_T0065966.1 MGP_CBAJ_G0028121.1 mouse_genomes_project 4 102807400 102816630 + Hook1 protein_coding processed_transcript MGP_CBAJ_T0065967.1 MGP_CBAJ_G0028121.1 mouse_genomes_project 4 102811050 102829196 + Hook1 protein_coding processed_transcript MGP_CBAJ_T0065968.1 MGP_CBAJ_G0028121.1 mouse_genomes_project 4 102820004 102826339 + Hook1 protein_coding processed_transcript MGP_CBAJ_T0065969.1 MGP_CBAJ_G0028121.1 mouse_genomes_project 4 102822895 102824389 + Hook1 protein_coding processed_transcript MGP_CBAJ_T0065970.1 MGP_CBAJ_G0028121.1 mouse_genomes_project 4 102826722 102828943 + Hook1 protein_coding processed_transcript MGP_CBAJ_T0065971.1 MGP_CBAJ_G0028121.1 mouse_genomes_project 4 102827952 102832103 + Hook1 protein_coding processed_transcript MGP_CBAJ_T0010504.1 MGP_CBAJ_G0008642.1 mouse_genomes_project 4 142759036 142759126 - Gm22033 miRNA miRNA MGP_CBAJ_T0001388.1 MGP_CBAJ_G0001313.1 mouse_genomes_project 4 152486199 152488846 - TEC TEC MGP_CBAJ_T0014309.1 MGP_CBAJ_G0012421.1 mouse_genomes_project 4 35397960 35398394 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100516.1 MGP_CBAJ_G0038771.1 mouse_genomes_project 4 13647112 13647180 - Gm26148 snoRNA snoRNA MGP_CBAJ_T0004377.1 MGP_CBAJ_G0003812.1 mouse_genomes_project 4 65354790 65364266 + Gm12910 antisense antisense MGP_CBAJ_T0065911.1 MGP_CBAJ_G0028110.1 mouse_genomes_project 4 99894440 99895817 - MGP_CBAJ_P0065911 Tusc1 protein_coding protein_coding MGP_CBAJ_T0066724.1 MGP_CBAJ_G0028283.1 mouse_genomes_project 4 124835859 124848063 - MGP_CBAJ_P0066724 Lurap1 protein_coding protein_coding MGP_CBAJ_T0066727.1 MGP_CBAJ_G0028283.1 mouse_genomes_project 4 124840973 124854556 - Lurap1 protein_coding processed_transcript MGP_CBAJ_T0068737.1 MGP_CBAJ_G0028762.1 mouse_genomes_project 4 157862077 157878051 - MGP_CBAJ_P0068737 Gm436 protein_coding protein_coding MGP_CBAJ_T0007827.1 MGP_CBAJ_G0006390.1 mouse_genomes_project 4 123007434 123008078 - Gm28864 lincRNA lincRNA MGP_CBAJ_T0004347.1 MGP_CBAJ_G0003787.1 mouse_genomes_project 4 28017147 28017927 - Gm11915 antisense antisense MGP_CBAJ_T0064183.1 MGP_CBAJ_G0027703.1 mouse_genomes_project 4 549357 563525 - MGP_CBAJ_P0064183 Sdr16c5 protein_coding protein_coding MGP_CBAJ_T0064184.1 MGP_CBAJ_G0027703.1 mouse_genomes_project 4 556202 560483 - Sdr16c5 protein_coding processed_transcript MGP_CBAJ_T0007890.1 MGP_CBAJ_G0006431.1 mouse_genomes_project 4 143794916 143798098 + Gm26615 lincRNA lincRNA MGP_CBAJ_T0064226.1 MGP_CBAJ_G0027714.1 mouse_genomes_project 4 5491809 5575730 + MGP_CBAJ_P0064226 Rab2a protein_coding protein_coding MGP_CBAJ_T0004463.1 MGP_CBAJ_G0003875.1 mouse_genomes_project 4 143138617 143139532 + Gm12999 antisense antisense MGP_CBAJ_T0001385.1 MGP_CBAJ_G0001310.1 mouse_genomes_project 4 142610876 142619518 - TEC TEC MGP_CBAJ_T0101895.1 MGP_CBAJ_G0039926.1 mouse_genomes_project 4 94794706 94795251 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0069256.1 MGP_CBAJ_G0028863.1 mouse_genomes_project 4 169752592 169771398 + MGP_CBAJ_P0069256 protein_coding protein_coding MGP_CBAJ_T0069257.1 MGP_CBAJ_G0028863.1 mouse_genomes_project 4 169766171 169767250 + protein_coding processed_transcript MGP_CBAJ_T0066427.1 MGP_CBAJ_G0028218.1 mouse_genomes_project 4 116726032 116744987 - MGP_CBAJ_P0066427 Fam159a protein_coding protein_coding MGP_CBAJ_T0069127.1 MGP_CBAJ_G0028842.1 mouse_genomes_project 4 166855657 166865538 + MGP_CBAJ_P0069127 Icmt protein_coding protein_coding MGP_CBAJ_T0069128.1 MGP_CBAJ_G0028842.1 mouse_genomes_project 4 166855734 166865537 + MGP_CBAJ_P0069128 Icmt protein_coding nonsense_mediated_decay MGP_CBAJ_T0069129.1 MGP_CBAJ_G0028842.1 mouse_genomes_project 4 166856086 166859185 + Icmt protein_coding processed_transcript MGP_CBAJ_T0069130.1 MGP_CBAJ_G0028842.1 mouse_genomes_project 4 166863803 166865485 + Icmt protein_coding processed_transcript MGP_CBAJ_T0099240.1 MGP_CBAJ_G0037495.1 mouse_genomes_project 4 14689134 14689240 - Gm23975 snRNA snRNA MGP_CBAJ_T0064630.1 MGP_CBAJ_G0027809.1 mouse_genomes_project 4 39994520 39996002 + MGP_CBAJ_P0064630 1700009N14Rik protein_coding protein_coding MGP_CBAJ_T0068896.1 MGP_CBAJ_G0028799.1 mouse_genomes_project 4 163122675 163133037 - MGP_CBAJ_P0068896 Apitd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068897.1 MGP_CBAJ_G0028799.1 mouse_genomes_project 4 163124075 163133058 - MGP_CBAJ_P0068897 Apitd1 protein_coding protein_coding MGP_CBAJ_T0068898.1 MGP_CBAJ_G0028799.1 mouse_genomes_project 4 163124082 163125992 - Apitd1 protein_coding retained_intron MGP_CBAJ_T0068899.1 MGP_CBAJ_G0028799.1 mouse_genomes_project 4 163124308 163133012 - MGP_CBAJ_P0068899 Apitd1 protein_coding protein_coding MGP_CBAJ_T0068900.1 MGP_CBAJ_G0028799.1 mouse_genomes_project 4 163124311 163133054 - MGP_CBAJ_P0068900 Apitd1 protein_coding protein_coding MGP_CBAJ_T0068901.1 MGP_CBAJ_G0028799.1 mouse_genomes_project 4 163126899 163133066 - MGP_CBAJ_P0068901 Apitd1 protein_coding protein_coding MGP_CBAJ_T0007740.1 MGP_CBAJ_G0006322.1 mouse_genomes_project 4 54162352 54276973 - C630028M04Rik lincRNA lincRNA MGP_CBAJ_T0069395.1 MGP_CBAJ_G0028886.1 mouse_genomes_project 4 170729099 170731239 + MGP_CBAJ_P0069395 Fndc10 protein_coding protein_coding MGP_CBAJ_T0065035.1 MGP_CBAJ_G0027888.1 mouse_genomes_project 4 44773858 44775310 + MGP_CBAJ_P0065035 Hrct1 protein_coding protein_coding MGP_CBAJ_T0068726.1 MGP_CBAJ_G0028752.1 mouse_genomes_project 4 157457895 157470343 + MGP_CBAJ_P0068726 protein_coding protein_coding MGP_CBAJ_T0069223.1 MGP_CBAJ_G0028857.1 mouse_genomes_project 4 168995243 169002014 - MGP_CBAJ_P0069223 Tprgl protein_coding protein_coding MGP_CBAJ_T0069224.1 MGP_CBAJ_G0028857.1 mouse_genomes_project 4 168995898 169002014 - Tprgl protein_coding processed_transcript MGP_CBAJ_T0069225.1 MGP_CBAJ_G0028857.1 mouse_genomes_project 4 168996114 169001980 - MGP_CBAJ_P0069225 Tprgl protein_coding protein_coding MGP_CBAJ_T0069226.1 MGP_CBAJ_G0028857.1 mouse_genomes_project 4 168996231 168997925 - Tprgl protein_coding processed_transcript MGP_CBAJ_T0069227.1 MGP_CBAJ_G0028857.1 mouse_genomes_project 4 168997325 169001954 - Tprgl protein_coding processed_transcript MGP_CBAJ_T0066923.1 MGP_CBAJ_G0028319.1 mouse_genomes_project 4 126818233 126819552 - Ccdc24 protein_coding processed_transcript MGP_CBAJ_T0066924.1 MGP_CBAJ_G0028319.1 mouse_genomes_project 4 126819326 126821926 - Ccdc24 protein_coding retained_intron MGP_CBAJ_T0066926.1 MGP_CBAJ_G0028319.1 mouse_genomes_project 4 126820202 126823146 - MGP_CBAJ_P0066926 Ccdc24 protein_coding protein_coding MGP_CBAJ_T0066927.1 MGP_CBAJ_G0028319.1 mouse_genomes_project 4 126820202 126822776 - MGP_CBAJ_P0066927 Ccdc24 protein_coding protein_coding MGP_CBAJ_T0066928.1 MGP_CBAJ_G0028319.1 mouse_genomes_project 4 126820343 126821960 - Ccdc24 protein_coding processed_transcript MGP_CBAJ_T0066929.1 MGP_CBAJ_G0028319.1 mouse_genomes_project 4 126820721 126823183 - MGP_CBAJ_P0066929 Ccdc24 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066930.1 MGP_CBAJ_G0028319.1 mouse_genomes_project 4 126821118 126823146 - MGP_CBAJ_P0066930 Ccdc24 protein_coding protein_coding MGP_CBAJ_T0010501.1 MGP_CBAJ_G0008639.1 mouse_genomes_project 4 139996036 139996108 - Mir7016 miRNA miRNA MGP_CBAJ_T0065203.1 MGP_CBAJ_G0027921.1 mouse_genomes_project 4 47761409 47764214 + MGP_CBAJ_P0065203 Foxe1 protein_coding protein_coding MGP_CBAJ_T0007917.1 MGP_CBAJ_G0006454.1 mouse_genomes_project 4 154968398 155013339 - Gm13052 lincRNA lincRNA MGP_CBAJ_T0067862.1 MGP_CBAJ_G0028533.1 mouse_genomes_project 4 143052737 143057951 - MGP_CBAJ_P0067862 Med18 protein_coding protein_coding MGP_CBAJ_T0067863.1 MGP_CBAJ_G0028533.1 mouse_genomes_project 4 143053984 143057361 - MGP_CBAJ_P0067863 Med18 protein_coding protein_coding MGP_CBAJ_T0007727.1 MGP_CBAJ_G0006310.1 mouse_genomes_project 4 41128782 41172492 - 4933428C19Rik lincRNA lincRNA MGP_CBAJ_T0068444.1 MGP_CBAJ_G0028668.1 mouse_genomes_project 4 150934529 150953991 - MGP_CBAJ_P0068444 Otud3 protein_coding protein_coding MGP_CBAJ_T0068760.1 MGP_CBAJ_G0028770.1 mouse_genomes_project 4 161536808 161558915 - MGP_CBAJ_P0068760 Zfp933 protein_coding protein_coding MGP_CBAJ_T0068761.1 MGP_CBAJ_G0028770.1 mouse_genomes_project 4 161540385 161558915 - MGP_CBAJ_P0068761 Zfp933 protein_coding protein_coding MGP_CBAJ_T0065268.1 MGP_CBAJ_G0027939.1 mouse_genomes_project 4 49943713 49973140 + Invs protein_coding processed_transcript MGP_CBAJ_T0065269.1 MGP_CBAJ_G0027939.1 mouse_genomes_project 4 49943753 49945006 + Invs protein_coding processed_transcript MGP_CBAJ_T0065270.1 MGP_CBAJ_G0027939.1 mouse_genomes_project 4 49943755 50117108 + MGP_CBAJ_P0065270 Invs protein_coding protein_coding MGP_CBAJ_T0065271.1 MGP_CBAJ_G0027939.1 mouse_genomes_project 4 49943769 49951060 + Invs protein_coding processed_transcript MGP_CBAJ_T0065272.1 MGP_CBAJ_G0027939.1 mouse_genomes_project 4 49943779 50112505 + MGP_CBAJ_P0065272 Invs protein_coding nonsense_mediated_decay MGP_CBAJ_T0065273.1 MGP_CBAJ_G0027939.1 mouse_genomes_project 4 50065410 50081682 + Invs protein_coding processed_transcript MGP_CBAJ_T0007770.1 MGP_CBAJ_G0006346.1 mouse_genomes_project 4 75166814 75221923 - Gm11228 lincRNA lincRNA MGP_CBAJ_T0068506.1 MGP_CBAJ_G0028683.1 mouse_genomes_project 4 151795772 151814010 + MGP_CBAJ_P0068506 Tas1r2 protein_coding protein_coding MGP_CBAJ_T0068507.1 MGP_CBAJ_G0028683.1 mouse_genomes_project 4 151795783 151813590 + MGP_CBAJ_P0068507 Tas1r2 protein_coding protein_coding MGP_CBAJ_T0004523.1 MGP_CBAJ_G0003922.1 mouse_genomes_project 4 169440768 169448150 + Gm13133 antisense antisense MGP_CBAJ_T0066214.1 MGP_CBAJ_G0028181.1 mouse_genomes_project 4 113763499 113768453 + MGP_CBAJ_P0066214 Gm12728 protein_coding protein_coding MGP_CBAJ_T0066215.1 MGP_CBAJ_G0028181.1 mouse_genomes_project 4 113764163 113768453 + MGP_CBAJ_P0066215 Gm12728 protein_coding protein_coding MGP_CBAJ_T0066216.1 MGP_CBAJ_G0028181.1 mouse_genomes_project 4 113768243 113768736 + Gm12728 protein_coding translated_processed_pseudogene MGP_CBAJ_T0064263.1 MGP_CBAJ_G0027718.1 mouse_genomes_project 4 6931592 6951494 + MGP_CBAJ_P0064263 Gdf6 protein_coding protein_coding MGP_CBAJ_T0065869.1 MGP_CBAJ_G0028089.1 mouse_genomes_project 4 94673013 94673807 - MGP_CBAJ_P0065869 Ifna6 protein_coding protein_coding MGP_CBAJ_T0068731.1 MGP_CBAJ_G0028756.1 mouse_genomes_project 4 157574858 157597539 - MGP_CBAJ_P0068731 1700012P22Rik protein_coding protein_coding MGP_CBAJ_T0007702.1 MGP_CBAJ_G0006286.1 mouse_genomes_project 4 9346051 9353785 + Gm26895 lincRNA lincRNA MGP_CBAJ_T0007782.1 MGP_CBAJ_G0006356.1 mouse_genomes_project 4 90352520 90353337 + Gm12415 lincRNA lincRNA MGP_CBAJ_T0014325.1 MGP_CBAJ_G0012437.1 mouse_genomes_project 4 41335720 41336167 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014479.1 MGP_CBAJ_G0012591.1 mouse_genomes_project 4 108886083 108939212 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014306.1 MGP_CBAJ_G0012418.1 mouse_genomes_project 4 34777192 34777860 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007905.1 MGP_CBAJ_G0006443.1 mouse_genomes_project 4 152071842 152081421 + Gm13028 lincRNA lincRNA MGP_CBAJ_T0014359.1 MGP_CBAJ_G0012471.1 mouse_genomes_project 4 55676469 55676918 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068668.1 MGP_CBAJ_G0028724.1 mouse_genomes_project 4 154468329 154612036 - MGP_CBAJ_P0068668 Fhad1 protein_coding protein_coding MGP_CBAJ_T0068669.1 MGP_CBAJ_G0028724.1 mouse_genomes_project 4 154468746 154608617 - MGP_CBAJ_P0068669 Fhad1 protein_coding protein_coding MGP_CBAJ_T0068670.1 MGP_CBAJ_G0028724.1 mouse_genomes_project 4 154468746 154608617 - MGP_CBAJ_P0068670 Fhad1 protein_coding unknown_likely_coding MGP_CBAJ_T0068671.1 MGP_CBAJ_G0028724.1 mouse_genomes_project 4 154496710 154503061 - Fhad1 protein_coding processed_transcript MGP_CBAJ_T0068672.1 MGP_CBAJ_G0028724.1 mouse_genomes_project 4 154496710 154515210 - MGP_CBAJ_P0068672 Fhad1 protein_coding protein_coding MGP_CBAJ_T0068673.1 MGP_CBAJ_G0028724.1 mouse_genomes_project 4 154510492 154533950 - Fhad1 protein_coding processed_transcript MGP_CBAJ_T0068674.1 MGP_CBAJ_G0028724.1 mouse_genomes_project 4 154514903 154540014 - Fhad1 protein_coding processed_transcript MGP_CBAJ_T0068675.1 MGP_CBAJ_G0028724.1 mouse_genomes_project 4 154548462 154612051 - Fhad1 protein_coding retained_intron MGP_CBAJ_T0068676.1 MGP_CBAJ_G0028724.1 mouse_genomes_project 4 154610746 154612008 - Fhad1 protein_coding processed_transcript MGP_CBAJ_T0065104.1 MGP_CBAJ_G0027901.1 mouse_genomes_project 4 45946210 45952309 + MGP_CBAJ_P0065104 Zcchc7 protein_coding protein_coding MGP_CBAJ_T0065105.1 MGP_CBAJ_G0027901.1 mouse_genomes_project 4 45946901 46143864 + MGP_CBAJ_P0065105 Zcchc7 protein_coding protein_coding MGP_CBAJ_T0065106.1 MGP_CBAJ_G0027901.1 mouse_genomes_project 4 45946921 46120772 + Zcchc7 protein_coding retained_intron MGP_CBAJ_T0065107.1 MGP_CBAJ_G0027901.1 mouse_genomes_project 4 45946972 45952566 + MGP_CBAJ_P0065107 Zcchc7 protein_coding protein_coding MGP_CBAJ_T0065108.1 MGP_CBAJ_G0027901.1 mouse_genomes_project 4 45946980 46119591 + MGP_CBAJ_P0065108 Zcchc7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065109.1 MGP_CBAJ_G0027901.1 mouse_genomes_project 4 45950781 46121834 + Zcchc7 protein_coding retained_intron MGP_CBAJ_T0065110.1 MGP_CBAJ_G0027901.1 mouse_genomes_project 4 46114722 46143023 + Zcchc7 protein_coding processed_transcript MGP_CBAJ_T0065111.1 MGP_CBAJ_G0027901.1 mouse_genomes_project 4 46132888 46143876 + MGP_CBAJ_P0065111 Zcchc7 protein_coding protein_coding MGP_CBAJ_T0065112.1 MGP_CBAJ_G0027901.1 mouse_genomes_project 4 46135765 46143023 + MGP_CBAJ_P0065112 Zcchc7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065490.1 MGP_CBAJ_G0028002.1 mouse_genomes_project 4 62466304 62551896 - MGP_CBAJ_P0065490 Ptbp3 protein_coding protein_coding MGP_CBAJ_T0065491.1 MGP_CBAJ_G0028002.1 mouse_genomes_project 4 62469692 62552025 - MGP_CBAJ_P0065491 Ptbp3 protein_coding protein_coding MGP_CBAJ_T0065492.1 MGP_CBAJ_G0028002.1 mouse_genomes_project 4 62471368 62482367 - Ptbp3 protein_coding retained_intron MGP_CBAJ_T0065493.1 MGP_CBAJ_G0028002.1 mouse_genomes_project 4 62478134 62489831 - MGP_CBAJ_P0065493 Ptbp3 protein_coding protein_coding MGP_CBAJ_T0065494.1 MGP_CBAJ_G0028002.1 mouse_genomes_project 4 62478139 62551993 - MGP_CBAJ_P0065494 Ptbp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065495.1 MGP_CBAJ_G0028002.1 mouse_genomes_project 4 62489734 62551998 - MGP_CBAJ_P0065495 Ptbp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065496.1 MGP_CBAJ_G0028002.1 mouse_genomes_project 4 62489784 62552006 - MGP_CBAJ_P0065496 Ptbp3 protein_coding protein_coding MGP_CBAJ_T0065497.1 MGP_CBAJ_G0028002.1 mouse_genomes_project 4 62497319 62512249 - Ptbp3 protein_coding retained_intron MGP_CBAJ_T0065498.1 MGP_CBAJ_G0028002.1 mouse_genomes_project 4 62516054 62551478 - MGP_CBAJ_P0065498 Ptbp3 protein_coding protein_coding MGP_CBAJ_T0007699.1 MGP_CBAJ_G0006284.1 mouse_genomes_project 4 8373560 8377750 + Gm11827 lincRNA lincRNA MGP_CBAJ_T0007700.1 MGP_CBAJ_G0006284.1 mouse_genomes_project 4 8374709 8377750 + Gm11827 lincRNA lincRNA MGP_CBAJ_T0068849.1 MGP_CBAJ_G0028792.1 mouse_genomes_project 4 162463983 162465847 + MGP_CBAJ_P0068849 Masp2 protein_coding protein_coding MGP_CBAJ_T0068850.1 MGP_CBAJ_G0028792.1 mouse_genomes_project 4 162463993 162480198 + MGP_CBAJ_P0068850 Masp2 protein_coding protein_coding MGP_CBAJ_T0068851.1 MGP_CBAJ_G0028792.1 mouse_genomes_project 4 162463997 162474911 + Masp2 protein_coding retained_intron MGP_CBAJ_T0068852.1 MGP_CBAJ_G0028792.1 mouse_genomes_project 4 162464004 162465847 + Masp2 protein_coding retained_intron MGP_CBAJ_T0014492.1 MGP_CBAJ_G0012604.1 mouse_genomes_project 4 114311543 114311806 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0065380.1 MGP_CBAJ_G0027974.1 mouse_genomes_project 4 59463024 59464332 + MGP_CBAJ_P0065380 Gm26657 protein_coding protein_coding MGP_CBAJ_T0068055.1 MGP_CBAJ_G0028575.1 mouse_genomes_project 4 145090916 145151397 - MGP_CBAJ_P0068055 Cep85 protein_coding protein_coding MGP_CBAJ_T0068056.1 MGP_CBAJ_G0028575.1 mouse_genomes_project 4 145090924 145151266 - MGP_CBAJ_P0068056 Cep85 protein_coding protein_coding MGP_CBAJ_T0068057.1 MGP_CBAJ_G0028575.1 mouse_genomes_project 4 145092153 145096265 - Cep85 protein_coding processed_transcript MGP_CBAJ_T0068058.1 MGP_CBAJ_G0028575.1 mouse_genomes_project 4 145095854 145105334 - Cep85 protein_coding retained_intron MGP_CBAJ_T0068059.1 MGP_CBAJ_G0028575.1 mouse_genomes_project 4 145118107 145120321 - Cep85 protein_coding retained_intron MGP_CBAJ_T0068060.1 MGP_CBAJ_G0028575.1 mouse_genomes_project 4 145121745 145122768 - Cep85 protein_coding processed_transcript MGP_CBAJ_T0068061.1 MGP_CBAJ_G0028575.1 mouse_genomes_project 4 145121941 145151370 - MGP_CBAJ_P0068061 Cep85 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068062.1 MGP_CBAJ_G0028575.1 mouse_genomes_project 4 145133019 145151336 - Cep85 protein_coding retained_intron MGP_CBAJ_T0007780.1 MGP_CBAJ_G0006354.1 mouse_genomes_project 4 89598325 89601166 - 6030471H07Rik lincRNA lincRNA MGP_CBAJ_T0064800.1 MGP_CBAJ_G0027849.1 mouse_genomes_project 4 42604270 42608256 - MGP_CBAJ_P0064800 protein_coding protein_coding MGP_CBAJ_T0064814.1 MGP_CBAJ_G0027849.1 mouse_genomes_project 4 42607965 42608552 - MGP_CBAJ_P0064814 protein_coding protein_coding MGP_CBAJ_T0099271.1 MGP_CBAJ_G0037526.1 mouse_genomes_project 4 91809335 91809436 - Gm25811 snRNA snRNA MGP_CBAJ_T0066162.1 MGP_CBAJ_G0028169.1 mouse_genomes_project 4 110745820 110788185 - Wdr78 protein_coding retained_intron MGP_CBAJ_T0066163.1 MGP_CBAJ_G0028169.1 mouse_genomes_project 4 110745820 110841801 - MGP_CBAJ_P0066163 Wdr78 protein_coding protein_coding MGP_CBAJ_T0066164.1 MGP_CBAJ_G0028169.1 mouse_genomes_project 4 110745824 110842057 - MGP_CBAJ_P0066164 Wdr78 protein_coding protein_coding MGP_CBAJ_T0066165.1 MGP_CBAJ_G0028169.1 mouse_genomes_project 4 110745824 110841726 - MGP_CBAJ_P0066165 Wdr78 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066166.1 MGP_CBAJ_G0028169.1 mouse_genomes_project 4 110745856 110790833 - Wdr78 protein_coding retained_intron MGP_CBAJ_T0066167.1 MGP_CBAJ_G0028169.1 mouse_genomes_project 4 110747027 110749409 - Wdr78 protein_coding processed_transcript MGP_CBAJ_T0066168.1 MGP_CBAJ_G0028169.1 mouse_genomes_project 4 110747046 110788006 - MGP_CBAJ_P0066168 Wdr78 protein_coding protein_coding MGP_CBAJ_T0066169.1 MGP_CBAJ_G0028169.1 mouse_genomes_project 4 110799983 110805424 - MGP_CBAJ_P0066169 Wdr78 protein_coding protein_coding MGP_CBAJ_T0067071.1 MGP_CBAJ_G0028359.1 mouse_genomes_project 4 128395835 128400235 + MGP_CBAJ_P0067071 Cldn19 protein_coding protein_coding MGP_CBAJ_T0067072.1 MGP_CBAJ_G0028359.1 mouse_genomes_project 4 128395930 128402817 + MGP_CBAJ_P0067072 Cldn19 protein_coding protein_coding MGP_CBAJ_T0067014.1 MGP_CBAJ_G0028337.1 mouse_genomes_project 4 127665392 127672736 + MGP_CBAJ_P0067014 Ebna1bp2 protein_coding protein_coding MGP_CBAJ_T0067015.1 MGP_CBAJ_G0028337.1 mouse_genomes_project 4 127665441 127666525 + Ebna1bp2 protein_coding processed_transcript MGP_CBAJ_T0067016.1 MGP_CBAJ_G0028337.1 mouse_genomes_project 4 127665443 127666256 + Ebna1bp2 protein_coding processed_transcript MGP_CBAJ_T0067017.1 MGP_CBAJ_G0028337.1 mouse_genomes_project 4 127665753 127669152 + MGP_CBAJ_P0067017 Ebna1bp2 protein_coding protein_coding MGP_CBAJ_T0067018.1 MGP_CBAJ_G0028337.1 mouse_genomes_project 4 127665819 127670578 + Ebna1bp2 protein_coding processed_transcript MGP_CBAJ_T0007898.1 MGP_CBAJ_G0006436.1 mouse_genomes_project 4 148714634 148715504 - 1700037C06Rik lincRNA lincRNA MGP_CBAJ_T0067131.1 MGP_CBAJ_G0028372.1 mouse_genomes_project 4 129510573 129530883 - MGP_CBAJ_P0067131 Foxo6 protein_coding protein_coding MGP_CBAJ_T0007903.1 MGP_CBAJ_G0006441.1 mouse_genomes_project 4 151494405 151501473 - lincRNA lincRNA MGP_CBAJ_T0004365.1 MGP_CBAJ_G0003802.1 mouse_genomes_project 4 46240790 46244510 + 1700055D18Rik antisense antisense MGP_CBAJ_T0004366.1 MGP_CBAJ_G0003802.1 mouse_genomes_project 4 46241933 46243503 + 1700055D18Rik antisense antisense MGP_CBAJ_T0065457.1 MGP_CBAJ_G0027992.1 mouse_genomes_project 4 61714451 61715393 - MGP_CBAJ_P0065457 Olfr267 protein_coding protein_coding MGP_CBAJ_T0011433.1 MGP_CBAJ_G0009571.1 mouse_genomes_project 4 34591252 34591559 + Gm22849 misc_RNA misc_RNA MGP_CBAJ_T0007693.1 MGP_CBAJ_G0006281.1 mouse_genomes_project 4 4453994 4467102 + 8430436N08Rik lincRNA lincRNA MGP_CBAJ_T0014288.1 MGP_CBAJ_G0012400.1 mouse_genomes_project 4 28455833 28456554 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068283.1 MGP_CBAJ_G0028629.1 mouse_genomes_project 4 147942331 147944033 + MGP_CBAJ_P0068283 6030445D17Rik protein_coding protein_coding MGP_CBAJ_T0014516.1 MGP_CBAJ_G0012628.1 mouse_genomes_project 4 123939438 123939763 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001377.1 MGP_CBAJ_G0001303.1 mouse_genomes_project 4 106740669 106745350 + TEC TEC MGP_CBAJ_T0066380.1 MGP_CBAJ_G0028210.1 mouse_genomes_project 4 116141502 116168831 - MGP_CBAJ_P0066380 Cpt2 protein_coding protein_coding MGP_CBAJ_T0066381.1 MGP_CBAJ_G0028210.1 mouse_genomes_project 4 116141504 116168781 - MGP_CBAJ_P0066381 Cpt2 protein_coding protein_coding MGP_CBAJ_T0066382.1 MGP_CBAJ_G0028210.1 mouse_genomes_project 4 116147527 116168766 - MGP_CBAJ_P0066382 Cpt2 protein_coding protein_coding MGP_CBAJ_T0066383.1 MGP_CBAJ_G0028210.1 mouse_genomes_project 4 116147614 116155795 - Cpt2 protein_coding retained_intron MGP_CBAJ_T0066384.1 MGP_CBAJ_G0028210.1 mouse_genomes_project 4 116147761 116168668 - Cpt2 protein_coding processed_transcript MGP_CBAJ_T0066385.1 MGP_CBAJ_G0028210.1 mouse_genomes_project 4 116148116 116168809 - MGP_CBAJ_P0066385 Cpt2 protein_coding protein_coding MGP_CBAJ_T0064763.1 MGP_CBAJ_G0027843.1 mouse_genomes_project 4 42589968 42593436 + MGP_CBAJ_P0064763 Galt protein_coding protein_coding MGP_CBAJ_T0064764.1 MGP_CBAJ_G0027843.1 mouse_genomes_project 4 42589968 42593436 + MGP_CBAJ_P0064764 Galt protein_coding protein_coding MGP_CBAJ_T0064765.1 MGP_CBAJ_G0027843.1 mouse_genomes_project 4 42589993 42592290 + Galt protein_coding processed_transcript MGP_CBAJ_T0064766.1 MGP_CBAJ_G0027843.1 mouse_genomes_project 4 42589993 42591188 + Galt protein_coding processed_transcript MGP_CBAJ_T0064767.1 MGP_CBAJ_G0027843.1 mouse_genomes_project 4 42590498 42592221 + Galt protein_coding processed_transcript MGP_CBAJ_T0064768.1 MGP_CBAJ_G0027843.1 mouse_genomes_project 4 42590580 42592013 + Galt protein_coding processed_transcript MGP_CBAJ_T0064769.1 MGP_CBAJ_G0027843.1 mouse_genomes_project 4 42590701 42592221 + Galt protein_coding processed_transcript MGP_CBAJ_T0064770.1 MGP_CBAJ_G0027843.1 mouse_genomes_project 4 42590950 42593436 + Galt protein_coding processed_transcript MGP_CBAJ_T0064771.1 MGP_CBAJ_G0027843.1 mouse_genomes_project 4 42590994 42592979 + Galt protein_coding processed_transcript MGP_CBAJ_T0064772.1 MGP_CBAJ_G0027843.1 mouse_genomes_project 4 42591002 42592519 + Galt protein_coding processed_transcript MGP_CBAJ_T0014531.1 MGP_CBAJ_G0012643.1 mouse_genomes_project 4 127472424 127472632 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017826.1 MGP_CBAJ_G0015312.1 mouse_genomes_project 4 126094393 126094842 - 1700012C08Rik processed_transcript processed_transcript MGP_CBAJ_T0014466.1 MGP_CBAJ_G0012578.1 mouse_genomes_project 4 105360890 105361198 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100534.1 MGP_CBAJ_G0038789.1 mouse_genomes_project 4 52259631 52259763 + Gm25485 snoRNA snoRNA MGP_CBAJ_T0014319.1 MGP_CBAJ_G0012431.1 mouse_genomes_project 4 40350789 40351708 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0067601.1 MGP_CBAJ_G0028489.1 mouse_genomes_project 4 139761552 139796156 - MGP_CBAJ_P0067601 protein_coding unknown_likely_coding MGP_CBAJ_T0067602.1 MGP_CBAJ_G0028489.1 mouse_genomes_project 4 139761553 139796240 - MGP_CBAJ_P0067602 protein_coding protein_coding MGP_CBAJ_T0067603.1 MGP_CBAJ_G0028489.1 mouse_genomes_project 4 139761718 139762969 - protein_coding retained_intron MGP_CBAJ_T0067604.1 MGP_CBAJ_G0028489.1 mouse_genomes_project 4 139763533 139771891 - protein_coding retained_intron MGP_CBAJ_T0067605.1 MGP_CBAJ_G0028489.1 mouse_genomes_project 4 139771591 139777523 - protein_coding retained_intron MGP_CBAJ_T0067606.1 MGP_CBAJ_G0028489.1 mouse_genomes_project 4 139771738 139773685 - protein_coding retained_intron MGP_CBAJ_T0067607.1 MGP_CBAJ_G0028489.1 mouse_genomes_project 4 139771926 139773643 - protein_coding retained_intron MGP_CBAJ_T0067608.1 MGP_CBAJ_G0028489.1 mouse_genomes_project 4 139776339 139796218 - protein_coding retained_intron MGP_CBAJ_T0004352.1 MGP_CBAJ_G0003790.1 mouse_genomes_project 4 39929366 39994475 - Gm17094 antisense antisense MGP_CBAJ_T0017830.1 MGP_CBAJ_G0015316.1 mouse_genomes_project 4 134404639 134424609 - Gm12915 processed_transcript processed_transcript MGP_CBAJ_T0066594.1 MGP_CBAJ_G0028247.1 mouse_genomes_project 4 120714600 120724732 + MGP_CBAJ_P0066594 Skint7 protein_coding protein_coding MGP_CBAJ_T0066595.1 MGP_CBAJ_G0028247.1 mouse_genomes_project 4 120714604 120728337 + MGP_CBAJ_P0066595 Skint7 protein_coding protein_coding MGP_CBAJ_T0066596.1 MGP_CBAJ_G0028247.1 mouse_genomes_project 4 120714604 120722806 + MGP_CBAJ_P0066596 Skint7 protein_coding protein_coding MGP_CBAJ_T0066597.1 MGP_CBAJ_G0028247.1 mouse_genomes_project 4 120723643 120726173 + Skint7 protein_coding retained_intron MGP_CBAJ_T0010467.1 MGP_CBAJ_G0008605.1 mouse_genomes_project 4 46798630 46798698 - Gm22518 miRNA miRNA MGP_CBAJ_T0065084.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45702104 45892694 - MGP_CBAJ_P0065084 Pax5 protein_coding protein_coding MGP_CBAJ_T0065085.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45708492 45892625 - MGP_CBAJ_P0065085 Pax5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065086.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45708492 45892625 - MGP_CBAJ_P0065086 Pax5 protein_coding protein_coding MGP_CBAJ_T0065087.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45708492 45892625 - MGP_CBAJ_P0065087 Pax5 protein_coding protein_coding MGP_CBAJ_T0065088.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45708492 45892625 - MGP_CBAJ_P0065088 Pax5 protein_coding protein_coding MGP_CBAJ_T0065089.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45708492 45892625 - MGP_CBAJ_P0065089 Pax5 protein_coding protein_coding MGP_CBAJ_T0065090.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45708844 45892615 - MGP_CBAJ_P0065090 Pax5 protein_coding protein_coding MGP_CBAJ_T0065091.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45708844 45892615 - MGP_CBAJ_P0065091 Pax5 protein_coding protein_coding MGP_CBAJ_T0065092.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45708844 45892615 - MGP_CBAJ_P0065092 Pax5 protein_coding protein_coding MGP_CBAJ_T0065093.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45708844 45892615 - MGP_CBAJ_P0065093 Pax5 protein_coding protein_coding MGP_CBAJ_T0065094.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45708844 45892615 - MGP_CBAJ_P0065094 Pax5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065095.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45708844 45892615 - MGP_CBAJ_P0065095 Pax5 protein_coding protein_coding MGP_CBAJ_T0065096.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45708844 45892615 - MGP_CBAJ_P0065096 Pax5 protein_coding protein_coding MGP_CBAJ_T0065097.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45708851 45828008 - MGP_CBAJ_P0065097 Pax5 protein_coding protein_coding MGP_CBAJ_T0065098.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45745894 45866040 - Pax5 protein_coding processed_transcript MGP_CBAJ_T0065099.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45861664 45886213 - MGP_CBAJ_P0065099 Pax5 protein_coding protein_coding MGP_CBAJ_T0065100.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45861678 45885620 - Pax5 protein_coding processed_transcript MGP_CBAJ_T0065101.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45861678 45885620 - Pax5 protein_coding processed_transcript MGP_CBAJ_T0065102.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45861678 45885620 - Pax5 protein_coding processed_transcript MGP_CBAJ_T0065103.1 MGP_CBAJ_G0027900.1 mouse_genomes_project 4 45861678 45885620 - MGP_CBAJ_P0065103 Pax5 protein_coding protein_coding MGP_CBAJ_T0068888.1 MGP_CBAJ_G0028796.1 mouse_genomes_project 4 162905859 163071851 - MGP_CBAJ_P0068888 Pex14 protein_coding protein_coding MGP_CBAJ_T0068889.1 MGP_CBAJ_G0028796.1 mouse_genomes_project 4 162908562 163071791 - Pex14 protein_coding retained_intron MGP_CBAJ_T0068890.1 MGP_CBAJ_G0028796.1 mouse_genomes_project 4 162931211 163071790 - Pex14 protein_coding processed_transcript MGP_CBAJ_T0068891.1 MGP_CBAJ_G0028796.1 mouse_genomes_project 4 162931962 163071784 - MGP_CBAJ_P0068891 Pex14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068892.1 MGP_CBAJ_G0028796.1 mouse_genomes_project 4 162962936 163071803 - Pex14 protein_coding processed_transcript MGP_CBAJ_T0010521.1 MGP_CBAJ_G0008659.1 mouse_genomes_project 4 152111658 152111753 - Mir2139 miRNA miRNA MGP_CBAJ_T0011455.1 MGP_CBAJ_G0009593.1 mouse_genomes_project 4 130506572 130506891 + Gm22982 misc_RNA misc_RNA MGP_CBAJ_T0067787.1 MGP_CBAJ_G0028520.1 mouse_genomes_project 4 142312152 142336149 + MGP_CBAJ_P0067787 Mecr protein_coding protein_coding MGP_CBAJ_T0067788.1 MGP_CBAJ_G0028520.1 mouse_genomes_project 4 142312175 142329231 + MGP_CBAJ_P0067788 Mecr protein_coding protein_coding MGP_CBAJ_T0067789.1 MGP_CBAJ_G0028520.1 mouse_genomes_project 4 142312187 142312690 + Mecr protein_coding processed_transcript MGP_CBAJ_T0067790.1 MGP_CBAJ_G0028520.1 mouse_genomes_project 4 142322053 142329366 + Mecr protein_coding processed_transcript MGP_CBAJ_T0067791.1 MGP_CBAJ_G0028520.1 mouse_genomes_project 4 142322112 142326539 + Mecr protein_coding processed_transcript MGP_CBAJ_T0067792.1 MGP_CBAJ_G0028520.1 mouse_genomes_project 4 142326104 142333695 + Mecr protein_coding processed_transcript MGP_CBAJ_T0067793.1 MGP_CBAJ_G0028520.1 mouse_genomes_project 4 142326130 142336149 + Mecr protein_coding processed_transcript MGP_CBAJ_T0067794.1 MGP_CBAJ_G0028520.1 mouse_genomes_project 4 142328600 142333437 + Mecr protein_coding processed_transcript MGP_CBAJ_T0067795.1 MGP_CBAJ_G0028520.1 mouse_genomes_project 4 142330077 142335964 + Mecr protein_coding processed_transcript MGP_CBAJ_T0067796.1 MGP_CBAJ_G0028520.1 mouse_genomes_project 4 142333140 142336139 + Mecr protein_coding processed_transcript MGP_CBAJ_T0100561.1 MGP_CBAJ_G0038816.1 mouse_genomes_project 4 100731726 100731855 + Gm23836 snoRNA snoRNA MGP_CBAJ_T0014526.1 MGP_CBAJ_G0012638.1 mouse_genomes_project 4 125860387 125861027 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014373.1 MGP_CBAJ_G0012485.1 mouse_genomes_project 4 60222924 60223410 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065388.1 MGP_CBAJ_G0027977.1 mouse_genomes_project 4 59531484 59533765 + Fam206a protein_coding retained_intron MGP_CBAJ_T0065389.1 MGP_CBAJ_G0027977.1 mouse_genomes_project 4 59531488 59538741 + MGP_CBAJ_P0065389 Fam206a protein_coding protein_coding MGP_CBAJ_T0065390.1 MGP_CBAJ_G0027977.1 mouse_genomes_project 4 59531491 59538741 + MGP_CBAJ_P0065390 Fam206a protein_coding nonsense_mediated_decay MGP_CBAJ_T0065391.1 MGP_CBAJ_G0027977.1 mouse_genomes_project 4 59531757 59535087 + MGP_CBAJ_P0065391 Fam206a protein_coding nonsense_mediated_decay MGP_CBAJ_T0066531.1 MGP_CBAJ_G0028237.1 mouse_genomes_project 4 117993479 118039566 - MGP_CBAJ_P0066531 4930522H14Rik protein_coding protein_coding MGP_CBAJ_T0066532.1 MGP_CBAJ_G0028237.1 mouse_genomes_project 4 117993507 118039473 - MGP_CBAJ_P0066532 4930522H14Rik protein_coding protein_coding MGP_CBAJ_T0065984.1 MGP_CBAJ_G0028129.1 mouse_genomes_project 4 103467199 103495497 - MGP_CBAJ_P0065984 Cyp2j5 protein_coding protein_coding MGP_CBAJ_T0067147.1 MGP_CBAJ_G0028375.1 mouse_genomes_project 4 129823708 129856264 - MGP_CBAJ_P0067147 Ctps protein_coding protein_coding MGP_CBAJ_T0067148.1 MGP_CBAJ_G0028375.1 mouse_genomes_project 4 129825751 129828908 - Ctps protein_coding processed_transcript MGP_CBAJ_T0067149.1 MGP_CBAJ_G0028375.1 mouse_genomes_project 4 129825809 129831942 - Ctps protein_coding processed_transcript MGP_CBAJ_T0064450.1 MGP_CBAJ_G0027768.1 mouse_genomes_project 4 20781838 20803692 + Fbxl4 protein_coding processed_transcript MGP_CBAJ_T0064451.1 MGP_CBAJ_G0027768.1 mouse_genomes_project 4 20781838 20868386 + MGP_CBAJ_P0064451 Fbxl4 protein_coding protein_coding MGP_CBAJ_T0064452.1 MGP_CBAJ_G0027768.1 mouse_genomes_project 4 20781855 20868359 + MGP_CBAJ_P0064452 Fbxl4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064453.1 MGP_CBAJ_G0027768.1 mouse_genomes_project 4 20781866 20868383 + MGP_CBAJ_P0064453 Fbxl4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064454.1 MGP_CBAJ_G0027768.1 mouse_genomes_project 4 20781911 20868370 + MGP_CBAJ_P0064454 Fbxl4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0100512.1 MGP_CBAJ_G0038767.1 mouse_genomes_project 4 3401179 3401311 - Gm22473 snoRNA snoRNA MGP_CBAJ_T0010451.1 MGP_CBAJ_G0008589.1 mouse_genomes_project 4 13885482 13885592 - Gm22690 miRNA miRNA MGP_CBAJ_T0064746.1 MGP_CBAJ_G0027838.1 mouse_genomes_project 4 42524226 42604247 + MGP_CBAJ_P0064746 protein_coding protein_coding MGP_CBAJ_T0064779.1 MGP_CBAJ_G0027838.1 mouse_genomes_project 4 42598352 42600325 + protein_coding retained_intron MGP_CBAJ_T0064780.1 MGP_CBAJ_G0027838.1 mouse_genomes_project 4 42598354 42602833 + protein_coding retained_intron MGP_CBAJ_T0064781.1 MGP_CBAJ_G0027838.1 mouse_genomes_project 4 42602571 42604169 + protein_coding retained_intron MGP_CBAJ_T0064783.1 MGP_CBAJ_G0027838.1 mouse_genomes_project 4 42602706 42603241 + protein_coding retained_intron MGP_CBAJ_T0064784.1 MGP_CBAJ_G0027838.1 mouse_genomes_project 4 42603220 42604246 + protein_coding retained_intron MGP_CBAJ_T0011452.1 MGP_CBAJ_G0009590.1 mouse_genomes_project 4 123346262 123346360 + Gm24045 misc_RNA misc_RNA MGP_CBAJ_T0007767.1 MGP_CBAJ_G0006343.1 mouse_genomes_project 4 67761791 67786634 - Gm11217 lincRNA lincRNA MGP_CBAJ_T0066326.1 MGP_CBAJ_G0028203.1 mouse_genomes_project 4 115507057 115564344 + MGP_CBAJ_P0066326 Yipf1 protein_coding protein_coding MGP_CBAJ_T0066327.1 MGP_CBAJ_G0028203.1 mouse_genomes_project 4 115507063 115514152 + Yipf1 protein_coding processed_transcript MGP_CBAJ_T0066328.1 MGP_CBAJ_G0028203.1 mouse_genomes_project 4 115507078 115552633 + MGP_CBAJ_P0066328 Yipf1 protein_coding protein_coding MGP_CBAJ_T0066329.1 MGP_CBAJ_G0028203.1 mouse_genomes_project 4 115507106 115545647 + MGP_CBAJ_P0066329 Yipf1 protein_coding protein_coding MGP_CBAJ_T0066330.1 MGP_CBAJ_G0028203.1 mouse_genomes_project 4 115507131 115511729 + MGP_CBAJ_P0066330 Yipf1 protein_coding protein_coding MGP_CBAJ_T0066331.1 MGP_CBAJ_G0028203.1 mouse_genomes_project 4 115507825 115508534 + Yipf1 protein_coding processed_transcript MGP_CBAJ_T0066332.1 MGP_CBAJ_G0028203.1 mouse_genomes_project 4 115508459 115545258 + Yipf1 protein_coding processed_transcript MGP_CBAJ_T0066333.1 MGP_CBAJ_G0028203.1 mouse_genomes_project 4 115511683 115564345 + Yipf1 protein_coding processed_transcript MGP_CBAJ_T0066334.1 MGP_CBAJ_G0028203.1 mouse_genomes_project 4 115519562 115537082 + Yipf1 protein_coding processed_transcript MGP_CBAJ_T0066335.1 MGP_CBAJ_G0028203.1 mouse_genomes_project 4 115543690 115553750 + Yipf1 protein_coding processed_transcript MGP_CBAJ_T0066336.1 MGP_CBAJ_G0028203.1 mouse_genomes_project 4 115545133 115564344 + Yipf1 protein_coding processed_transcript MGP_CBAJ_T0007858.1 MGP_CBAJ_G0006412.1 mouse_genomes_project 4 138937086 138970096 + Gm12968 lincRNA lincRNA MGP_CBAJ_T0099273.1 MGP_CBAJ_G0037528.1 mouse_genomes_project 4 99374022 99374130 - Gm22605 snRNA snRNA MGP_CBAJ_T0014555.1 MGP_CBAJ_G0012667.1 mouse_genomes_project 4 133439773 133441170 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0064377.1 MGP_CBAJ_G0027747.1 mouse_genomes_project 4 13738997 13755747 - MGP_CBAJ_P0064377 Osgin2 protein_coding protein_coding MGP_CBAJ_T0064378.1 MGP_CBAJ_G0027747.1 mouse_genomes_project 4 13739103 13743980 - Osgin2 protein_coding processed_transcript MGP_CBAJ_T0064379.1 MGP_CBAJ_G0027747.1 mouse_genomes_project 4 13743822 13755655 - MGP_CBAJ_P0064379 Osgin2 protein_coding protein_coding MGP_CBAJ_T0064380.1 MGP_CBAJ_G0027747.1 mouse_genomes_project 4 13744402 13755680 - Osgin2 protein_coding processed_transcript MGP_CBAJ_T0064381.1 MGP_CBAJ_G0027747.1 mouse_genomes_project 4 13746749 13748264 - Osgin2 protein_coding processed_transcript MGP_CBAJ_T0014616.1 MGP_CBAJ_G0012728.1 mouse_genomes_project 4 163926481 163927038 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065514.1 MGP_CBAJ_G0028009.1 mouse_genomes_project 4 65136117 65311435 - MGP_CBAJ_P0065514 protein_coding protein_coding MGP_CBAJ_T0067663.1 MGP_CBAJ_G0028497.1 mouse_genomes_project 4 139903439 139942212 - MGP_CBAJ_P0067663 Txlna protein_coding protein_coding MGP_CBAJ_T0067664.1 MGP_CBAJ_G0028497.1 mouse_genomes_project 4 139903444 139941789 - Txlna protein_coding retained_intron MGP_CBAJ_T0067665.1 MGP_CBAJ_G0028497.1 mouse_genomes_project 4 139903444 139941952 - MGP_CBAJ_P0067665 Txlna protein_coding protein_coding MGP_CBAJ_T0067666.1 MGP_CBAJ_G0028497.1 mouse_genomes_project 4 139909528 139942212 - MGP_CBAJ_P0067666 Txlna protein_coding protein_coding MGP_CBAJ_T0067667.1 MGP_CBAJ_G0028497.1 mouse_genomes_project 4 139911743 139942125 - MGP_CBAJ_P0067667 Txlna protein_coding protein_coding MGP_CBAJ_T0067668.1 MGP_CBAJ_G0028497.1 mouse_genomes_project 4 139911759 139942106 - MGP_CBAJ_P0067668 Txlna protein_coding protein_coding MGP_CBAJ_T0067669.1 MGP_CBAJ_G0028497.1 mouse_genomes_project 4 139940610 139942107 - MGP_CBAJ_P0067669 Txlna protein_coding protein_coding MGP_CBAJ_T0014407.1 MGP_CBAJ_G0012519.1 mouse_genomes_project 4 79656489 79656804 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007720.1 MGP_CBAJ_G0006303.1 mouse_genomes_project 4 29898054 30002919 + Gm11924 lincRNA lincRNA MGP_CBAJ_T0007800.1 MGP_CBAJ_G0006371.1 mouse_genomes_project 4 106894522 106895899 - Gm12688 lincRNA lincRNA MGP_CBAJ_T0065883.1 MGP_CBAJ_G0028099.1 mouse_genomes_project 4 94966869 94967482 + MGP_CBAJ_P0065883 protein_coding protein_coding MGP_CBAJ_T0007804.1 MGP_CBAJ_G0006375.1 mouse_genomes_project 4 108803792 108815387 - E130102H24Rik lincRNA lincRNA MGP_CBAJ_T0007806.1 MGP_CBAJ_G0006375.1 mouse_genomes_project 4 108815180 108815874 - E130102H24Rik lincRNA lincRNA MGP_CBAJ_T0007793.1 MGP_CBAJ_G0006365.1 mouse_genomes_project 4 100721554 101073607 - lincRNA lincRNA MGP_CBAJ_T0068446.1 MGP_CBAJ_G0028670.1 mouse_genomes_project 4 151022731 151043826 + MGP_CBAJ_P0068446 Tmco4 protein_coding protein_coding MGP_CBAJ_T0068447.1 MGP_CBAJ_G0028670.1 mouse_genomes_project 4 151022735 151116435 + MGP_CBAJ_P0068447 Tmco4 protein_coding protein_coding MGP_CBAJ_T0068448.1 MGP_CBAJ_G0028670.1 mouse_genomes_project 4 151022748 151116431 + MGP_CBAJ_P0068448 Tmco4 protein_coding protein_coding MGP_CBAJ_T0068449.1 MGP_CBAJ_G0028670.1 mouse_genomes_project 4 151022752 151088543 + Tmco4 protein_coding processed_transcript MGP_CBAJ_T0004433.1 MGP_CBAJ_G0003851.1 mouse_genomes_project 4 126934851 126953755 + 9530034E10Rik antisense antisense MGP_CBAJ_T0064846.1 MGP_CBAJ_G0027861.1 mouse_genomes_project 4 43954275 43962345 - Fancg protein_coding retained_intron MGP_CBAJ_T0064847.1 MGP_CBAJ_G0027861.1 mouse_genomes_project 4 43954275 43962212 - MGP_CBAJ_P0064847 Fancg protein_coding protein_coding MGP_CBAJ_T0064848.1 MGP_CBAJ_G0027861.1 mouse_genomes_project 4 43954854 43955865 - Fancg protein_coding retained_intron MGP_CBAJ_T0064849.1 MGP_CBAJ_G0027861.1 mouse_genomes_project 4 43954943 43958384 - Fancg protein_coding processed_transcript MGP_CBAJ_T0064850.1 MGP_CBAJ_G0027861.1 mouse_genomes_project 4 43955192 43958429 - Fancg protein_coding processed_transcript MGP_CBAJ_T0064851.1 MGP_CBAJ_G0027861.1 mouse_genomes_project 4 43955845 43958697 - Fancg protein_coding processed_transcript MGP_CBAJ_T0064852.1 MGP_CBAJ_G0027861.1 mouse_genomes_project 4 43957147 43961016 - Fancg protein_coding processed_transcript MGP_CBAJ_T0064853.1 MGP_CBAJ_G0027861.1 mouse_genomes_project 4 43960929 43962027 - Fancg protein_coding retained_intron MGP_CBAJ_T0064854.1 MGP_CBAJ_G0027861.1 mouse_genomes_project 4 43961020 43962079 - Fancg protein_coding retained_intron MGP_CBAJ_T0064855.1 MGP_CBAJ_G0027861.1 mouse_genomes_project 4 43961899 43962363 - Fancg protein_coding processed_transcript MGP_CBAJ_T0101897.1 MGP_CBAJ_G0039928.1 mouse_genomes_project 4 102966604 102966783 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0064321.1 MGP_CBAJ_G0027730.1 mouse_genomes_project 4 9052677 9062969 + MGP_CBAJ_P0064321 Gem protein_coding protein_coding MGP_CBAJ_T0064322.1 MGP_CBAJ_G0027730.1 mouse_genomes_project 4 9054027 9062969 + MGP_CBAJ_P0064322 Gem protein_coding protein_coding MGP_CBAJ_T0068640.1 MGP_CBAJ_G0028714.1 mouse_genomes_project 4 154135108 154145657 - MGP_CBAJ_P0068640 Slc25a34 protein_coding protein_coding MGP_CBAJ_T0004398.1 MGP_CBAJ_G0003825.1 mouse_genomes_project 4 105322897 105324350 + 0610025J13Rik antisense antisense MGP_CBAJ_T0004399.1 MGP_CBAJ_G0003825.1 mouse_genomes_project 4 105322947 105333290 + 0610025J13Rik antisense antisense MGP_CBAJ_T0004400.1 MGP_CBAJ_G0003825.1 mouse_genomes_project 4 105322947 105333290 + 0610025J13Rik antisense antisense MGP_CBAJ_T0066598.1 MGP_CBAJ_G0028248.1 mouse_genomes_project 4 120744329 120771358 + MGP_CBAJ_P0066598 Skint1 protein_coding protein_coding MGP_CBAJ_T0066599.1 MGP_CBAJ_G0028248.1 mouse_genomes_project 4 120744329 120775222 + MGP_CBAJ_P0066599 Skint1 protein_coding protein_coding MGP_CBAJ_T0066600.1 MGP_CBAJ_G0028248.1 mouse_genomes_project 4 120744329 120771358 + MGP_CBAJ_P0066600 Skint1 protein_coding protein_coding MGP_CBAJ_T0066601.1 MGP_CBAJ_G0028248.1 mouse_genomes_project 4 120744329 120757632 + MGP_CBAJ_P0066601 Skint1 protein_coding protein_coding MGP_CBAJ_T0066602.1 MGP_CBAJ_G0028248.1 mouse_genomes_project 4 120744342 120750627 + Skint1 protein_coding retained_intron MGP_CBAJ_T0066784.1 MGP_CBAJ_G0028294.1 mouse_genomes_project 4 125455170 125457468 + Prdx1 protein_coding retained_intron MGP_CBAJ_T0066785.1 MGP_CBAJ_G0028294.1 mouse_genomes_project 4 125455170 125465936 + MGP_CBAJ_P0066785 Prdx1 protein_coding protein_coding MGP_CBAJ_T0066786.1 MGP_CBAJ_G0028294.1 mouse_genomes_project 4 125455174 125471350 + MGP_CBAJ_P0066786 Prdx1 protein_coding protein_coding MGP_CBAJ_T0066787.1 MGP_CBAJ_G0028294.1 mouse_genomes_project 4 125455432 125465086 + MGP_CBAJ_P0066787 Prdx1 protein_coding protein_coding MGP_CBAJ_T0066788.1 MGP_CBAJ_G0028294.1 mouse_genomes_project 4 125456884 125471280 + MGP_CBAJ_P0066788 Prdx1 protein_coding protein_coding MGP_CBAJ_T0014409.1 MGP_CBAJ_G0012521.1 mouse_genomes_project 4 79869379 79870559 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101922.1 MGP_CBAJ_G0039953.1 mouse_genomes_project 4 156296686 156297187 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0004504.1 MGP_CBAJ_G0003907.1 mouse_genomes_project 4 162892686 162894109 - Gm13205 antisense antisense MGP_CBAJ_T0064722.1 MGP_CBAJ_G0027833.1 mouse_genomes_project 4 42307105 42309860 - 1110017D15Rik protein_coding processed_transcript MGP_CBAJ_T0064723.1 MGP_CBAJ_G0027833.1 mouse_genomes_project 4 42307105 42309850 - 1110017D15Rik protein_coding processed_transcript MGP_CBAJ_T0064724.1 MGP_CBAJ_G0027833.1 mouse_genomes_project 4 42307105 42309855 - 1110017D15Rik protein_coding processed_transcript MGP_CBAJ_T0064725.1 MGP_CBAJ_G0027833.1 mouse_genomes_project 4 42307105 42313549 - MGP_CBAJ_P0064725 1110017D15Rik protein_coding protein_coding MGP_CBAJ_T0064726.1 MGP_CBAJ_G0027833.1 mouse_genomes_project 4 42307105 42319527 - MGP_CBAJ_P0064726 1110017D15Rik protein_coding protein_coding MGP_CBAJ_T0064727.1 MGP_CBAJ_G0027833.1 mouse_genomes_project 4 42307105 42319527 - MGP_CBAJ_P0064727 1110017D15Rik protein_coding protein_coding MGP_CBAJ_T0064728.1 MGP_CBAJ_G0027833.1 mouse_genomes_project 4 42309220 42319522 - 1110017D15Rik protein_coding processed_transcript MGP_CBAJ_T0064729.1 MGP_CBAJ_G0027833.1 mouse_genomes_project 4 42310613 42311044 - 1110017D15Rik protein_coding processed_transcript MGP_CBAJ_T0066291.1 MGP_CBAJ_G0028196.1 mouse_genomes_project 4 115261235 115272100 + MGP_CBAJ_P0066291 Cdcp2 protein_coding protein_coding MGP_CBAJ_T0014303.1 MGP_CBAJ_G0012415.1 mouse_genomes_project 4 34259531 34259984 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065586.1 MGP_CBAJ_G0028030.1 mouse_genomes_project 4 66739082 66744794 + MGP_CBAJ_P0065586 Orm1 protein_coding protein_coding MGP_CBAJ_T0100533.1 MGP_CBAJ_G0038788.1 mouse_genomes_project 4 50629636 50629761 + Gm23746 snoRNA snoRNA MGP_CBAJ_T0066101.1 MGP_CBAJ_G0028155.1 mouse_genomes_project 4 108885399 108942552 + MGP_CBAJ_P0066101 Ak4 protein_coding protein_coding MGP_CBAJ_T0066102.1 MGP_CBAJ_G0028155.1 mouse_genomes_project 4 108885411 108942552 + MGP_CBAJ_P0066102 Ak4 protein_coding protein_coding MGP_CBAJ_T0066103.1 MGP_CBAJ_G0028155.1 mouse_genomes_project 4 108885441 108942552 + MGP_CBAJ_P0066103 Ak4 protein_coding protein_coding MGP_CBAJ_T0066104.1 MGP_CBAJ_G0028155.1 mouse_genomes_project 4 108885997 108938483 + MGP_CBAJ_P0066104 Ak4 protein_coding protein_coding MGP_CBAJ_T0066105.1 MGP_CBAJ_G0028155.1 mouse_genomes_project 4 108885997 108936062 + MGP_CBAJ_P0066105 Ak4 protein_coding protein_coding MGP_CBAJ_T0066106.1 MGP_CBAJ_G0028155.1 mouse_genomes_project 4 108886759 108939225 + Ak4 protein_coding processed_transcript MGP_CBAJ_T0066107.1 MGP_CBAJ_G0028155.1 mouse_genomes_project 4 108922648 108939324 + MGP_CBAJ_P0066107 Ak4 protein_coding protein_coding MGP_CBAJ_T0007737.1 MGP_CBAJ_G0006319.1 mouse_genomes_project 4 48515495 48517961 - Gm568 lincRNA lincRNA MGP_CBAJ_T0014243.1 MGP_CBAJ_G0012355.1 mouse_genomes_project 4 16015728 16016738 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064929.1 MGP_CBAJ_G0027869.1 mouse_genomes_project 4 44418799 44424918 + MGP_CBAJ_P0064929 Tesk1 protein_coding protein_coding MGP_CBAJ_T0064930.1 MGP_CBAJ_G0027869.1 mouse_genomes_project 4 44420183 44424648 + MGP_CBAJ_P0064930 Tesk1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064931.1 MGP_CBAJ_G0027869.1 mouse_genomes_project 4 44421446 44422252 + Tesk1 protein_coding retained_intron MGP_CBAJ_T0064932.1 MGP_CBAJ_G0027869.1 mouse_genomes_project 4 44421579 44422689 + Tesk1 protein_coding retained_intron MGP_CBAJ_T0064933.1 MGP_CBAJ_G0027869.1 mouse_genomes_project 4 44421821 44422883 + Tesk1 protein_coding retained_intron MGP_CBAJ_T0065307.1 MGP_CBAJ_G0027952.1 mouse_genomes_project 4 51552162 51558974 + MGP_CBAJ_P0065307 Rnf20 protein_coding protein_coding MGP_CBAJ_T0065308.1 MGP_CBAJ_G0027952.1 mouse_genomes_project 4 51552216 51577102 + MGP_CBAJ_P0065308 Rnf20 protein_coding protein_coding MGP_CBAJ_T0065309.1 MGP_CBAJ_G0027952.1 mouse_genomes_project 4 51552216 51570472 + MGP_CBAJ_P0065309 Rnf20 protein_coding protein_coding MGP_CBAJ_T0065310.1 MGP_CBAJ_G0027952.1 mouse_genomes_project 4 51552222 51577103 + MGP_CBAJ_P0065310 Rnf20 protein_coding protein_coding MGP_CBAJ_T0065311.1 MGP_CBAJ_G0027952.1 mouse_genomes_project 4 51552249 51564755 + MGP_CBAJ_P0065311 Rnf20 protein_coding protein_coding MGP_CBAJ_T0065312.1 MGP_CBAJ_G0027952.1 mouse_genomes_project 4 51552293 51560288 + Rnf20 protein_coding processed_transcript MGP_CBAJ_T0065313.1 MGP_CBAJ_G0027952.1 mouse_genomes_project 4 51552315 51563170 + Rnf20 protein_coding processed_transcript MGP_CBAJ_T0065314.1 MGP_CBAJ_G0027952.1 mouse_genomes_project 4 51561925 51568664 + Rnf20 protein_coding processed_transcript MGP_CBAJ_T0065315.1 MGP_CBAJ_G0027952.1 mouse_genomes_project 4 51570483 51573021 + Rnf20 protein_coding processed_transcript MGP_CBAJ_T0065316.1 MGP_CBAJ_G0027952.1 mouse_genomes_project 4 51571188 51572745 + Rnf20 protein_coding processed_transcript MGP_CBAJ_T0066230.1 MGP_CBAJ_G0028188.1 mouse_genomes_project 4 114747601 114750072 + MGP_CBAJ_P0066230 Pars2 protein_coding protein_coding MGP_CBAJ_T0066231.1 MGP_CBAJ_G0028188.1 mouse_genomes_project 4 114747630 114751813 + MGP_CBAJ_P0066231 Pars2 protein_coding protein_coding MGP_CBAJ_T0066232.1 MGP_CBAJ_G0028188.1 mouse_genomes_project 4 114747635 114749399 + Pars2 protein_coding processed_transcript MGP_CBAJ_T0066233.1 MGP_CBAJ_G0028188.1 mouse_genomes_project 4 114747638 114751815 + MGP_CBAJ_P0066233 Pars2 protein_coding protein_coding MGP_CBAJ_T0099277.1 MGP_CBAJ_G0037532.1 mouse_genomes_project 4 103773661 103773725 + Gm27521 snRNA snRNA MGP_CBAJ_T0014376.1 MGP_CBAJ_G0012488.1 mouse_genomes_project 4 61479274 61479691 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007834.1 MGP_CBAJ_G0006397.1 mouse_genomes_project 4 128156123 128170631 - Gm12866 lincRNA lincRNA MGP_CBAJ_T0067421.1 MGP_CBAJ_G0028446.1 mouse_genomes_project 4 136414134 136419157 + MGP_CBAJ_P0067421 5730409E04Rik protein_coding protein_coding MGP_CBAJ_T0067422.1 MGP_CBAJ_G0028446.1 mouse_genomes_project 4 136414170 136419157 + MGP_CBAJ_P0067422 5730409E04Rik protein_coding protein_coding MGP_CBAJ_T0068595.1 MGP_CBAJ_G0028704.1 mouse_genomes_project 4 153710919 153742865 + MGP_CBAJ_P0068595 Epha2 protein_coding protein_coding MGP_CBAJ_T0068596.1 MGP_CBAJ_G0028704.1 mouse_genomes_project 4 153712086 153718521 + Epha2 protein_coding processed_transcript MGP_CBAJ_T0068597.1 MGP_CBAJ_G0028704.1 mouse_genomes_project 4 153718680 153720745 + Epha2 protein_coding processed_transcript MGP_CBAJ_T0068598.1 MGP_CBAJ_G0028704.1 mouse_genomes_project 4 153730276 153734382 + Epha2 protein_coding processed_transcript MGP_CBAJ_T0065330.1 MGP_CBAJ_G0027957.1 mouse_genomes_project 4 54904108 54919003 + MGP_CBAJ_P0065330 Toporsl protein_coding protein_coding MGP_CBAJ_T0065331.1 MGP_CBAJ_G0027957.1 mouse_genomes_project 4 54913773 54919000 + MGP_CBAJ_P0065331 Toporsl protein_coding protein_coding MGP_CBAJ_T0014587.1 MGP_CBAJ_G0012699.1 mouse_genomes_project 4 147223607 147223821 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007751.1 MGP_CBAJ_G0006329.1 mouse_genomes_project 4 58168803 58218831 + Gm12511 lincRNA lincRNA MGP_CBAJ_T0068622.1 MGP_CBAJ_G0028712.1 mouse_genomes_project 4 154077247 154113070 - MGP_CBAJ_P0068622 Fblim1 protein_coding protein_coding MGP_CBAJ_T0068623.1 MGP_CBAJ_G0028712.1 mouse_genomes_project 4 154077247 154111376 - MGP_CBAJ_P0068623 Fblim1 protein_coding protein_coding MGP_CBAJ_T0068624.1 MGP_CBAJ_G0028712.1 mouse_genomes_project 4 154077247 154119216 - MGP_CBAJ_P0068624 Fblim1 protein_coding protein_coding MGP_CBAJ_T0068625.1 MGP_CBAJ_G0028712.1 mouse_genomes_project 4 154102553 154112981 - MGP_CBAJ_P0068625 Fblim1 protein_coding protein_coding MGP_CBAJ_T0068626.1 MGP_CBAJ_G0028712.1 mouse_genomes_project 4 154102575 154119260 - MGP_CBAJ_P0068626 Fblim1 protein_coding protein_coding MGP_CBAJ_T0068627.1 MGP_CBAJ_G0028712.1 mouse_genomes_project 4 154102575 154119201 - MGP_CBAJ_P0068627 Fblim1 protein_coding protein_coding MGP_CBAJ_T0068628.1 MGP_CBAJ_G0028712.1 mouse_genomes_project 4 154102598 154111669 - MGP_CBAJ_P0068628 Fblim1 protein_coding protein_coding MGP_CBAJ_T0068629.1 MGP_CBAJ_G0028712.1 mouse_genomes_project 4 154103240 154113179 - MGP_CBAJ_P0068629 Fblim1 protein_coding protein_coding MGP_CBAJ_T0068630.1 MGP_CBAJ_G0028712.1 mouse_genomes_project 4 154103303 154109612 - Fblim1 protein_coding processed_transcript MGP_CBAJ_T0068631.1 MGP_CBAJ_G0028712.1 mouse_genomes_project 4 154103319 154113034 - MGP_CBAJ_P0068631 Fblim1 protein_coding protein_coding MGP_CBAJ_T0068632.1 MGP_CBAJ_G0028712.1 mouse_genomes_project 4 154103320 154111376 - MGP_CBAJ_P0068632 Fblim1 protein_coding protein_coding MGP_CBAJ_T0068633.1 MGP_CBAJ_G0028712.1 mouse_genomes_project 4 154103330 154111358 - MGP_CBAJ_P0068633 Fblim1 protein_coding protein_coding MGP_CBAJ_T0068634.1 MGP_CBAJ_G0028712.1 mouse_genomes_project 4 154108342 154119189 - MGP_CBAJ_P0068634 Fblim1 protein_coding protein_coding MGP_CBAJ_T0068635.1 MGP_CBAJ_G0028712.1 mouse_genomes_project 4 154108393 154119200 - MGP_CBAJ_P0068635 Fblim1 protein_coding protein_coding MGP_CBAJ_T0068636.1 MGP_CBAJ_G0028712.1 mouse_genomes_project 4 154108460 154119191 - MGP_CBAJ_P0068636 Fblim1 protein_coding protein_coding MGP_CBAJ_T0064695.1 MGP_CBAJ_G0027826.1 mouse_genomes_project 4 41891980 41962360 + MGP_CBAJ_P0064695 Ube2r2 protein_coding protein_coding MGP_CBAJ_T0064696.1 MGP_CBAJ_G0027826.1 mouse_genomes_project 4 41951905 41959803 + Ube2r2 protein_coding retained_intron MGP_CBAJ_T0064697.1 MGP_CBAJ_G0027826.1 mouse_genomes_project 4 41957863 41960016 + Ube2r2 protein_coding retained_intron MGP_CBAJ_T0064532.1 MGP_CBAJ_G0027785.1 mouse_genomes_project 4 32472986 32537585 - MGP_CBAJ_P0064532 Ankrd6 protein_coding unknown_likely_coding MGP_CBAJ_T0064533.1 MGP_CBAJ_G0027785.1 mouse_genomes_project 4 32472993 32653768 - MGP_CBAJ_P0064533 Ankrd6 protein_coding protein_coding MGP_CBAJ_T0064534.1 MGP_CBAJ_G0027785.1 mouse_genomes_project 4 32474698 32533835 - MGP_CBAJ_P0064534 Ankrd6 protein_coding protein_coding MGP_CBAJ_T0064535.1 MGP_CBAJ_G0027785.1 mouse_genomes_project 4 32490181 32491712 - Ankrd6 protein_coding processed_transcript MGP_CBAJ_T0064536.1 MGP_CBAJ_G0027785.1 mouse_genomes_project 4 32493374 32607293 - Ankrd6 protein_coding processed_transcript MGP_CBAJ_T0064537.1 MGP_CBAJ_G0027785.1 mouse_genomes_project 4 32495983 32534076 - Ankrd6 protein_coding processed_transcript MGP_CBAJ_T0068721.1 MGP_CBAJ_G0028747.1 mouse_genomes_project 4 157416623 157419848 + MGP_CBAJ_P0068721 protein_coding protein_coding MGP_CBAJ_T0004351.1 MGP_CBAJ_G0003789.1 mouse_genomes_project 4 34946026 34950772 + Gm12364 antisense antisense MGP_CBAJ_T0067174.1 MGP_CBAJ_G0028384.1 mouse_genomes_project 4 130388936 130404842 + MGP_CBAJ_P0067174 Col9a2 protein_coding protein_coding MGP_CBAJ_T0067175.1 MGP_CBAJ_G0028384.1 mouse_genomes_project 4 130389299 130393892 + Col9a2 protein_coding retained_intron MGP_CBAJ_T0067176.1 MGP_CBAJ_G0028384.1 mouse_genomes_project 4 130402518 130404339 + Col9a2 protein_coding processed_transcript MGP_CBAJ_T0068539.1 MGP_CBAJ_G0028693.1 mouse_genomes_project 4 153220413 153277603 + MGP_CBAJ_P0068539 Padi2 protein_coding protein_coding MGP_CBAJ_T0068540.1 MGP_CBAJ_G0028693.1 mouse_genomes_project 4 153244598 153253257 + Padi2 protein_coding processed_transcript MGP_CBAJ_T0068541.1 MGP_CBAJ_G0028693.1 mouse_genomes_project 4 153268516 153274649 + Padi2 protein_coding processed_transcript MGP_CBAJ_T0066468.1 MGP_CBAJ_G0028229.1 mouse_genomes_project 4 117264090 117265719 + MGP_CBAJ_P0066468 Kti12 protein_coding protein_coding MGP_CBAJ_T0014535.1 MGP_CBAJ_G0012647.1 mouse_genomes_project 4 128078376 128079382 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068063.1 MGP_CBAJ_G0028576.1 mouse_genomes_project 4 145156995 145169361 - MGP_CBAJ_P0068063 Gm7534 protein_coding protein_coding MGP_CBAJ_T0100535.1 MGP_CBAJ_G0038790.1 mouse_genomes_project 4 53790661 53790770 + Gm23043 snoRNA snoRNA MGP_CBAJ_T0007908.1 MGP_CBAJ_G0006445.1 mouse_genomes_project 4 152557218 152562225 + Gm13016 lincRNA lincRNA MGP_CBAJ_T0065548.1 MGP_CBAJ_G0028021.1 mouse_genomes_project 4 65789178 65854636 - MGP_CBAJ_P0065548 Pole3 protein_coding protein_coding MGP_CBAJ_T0065549.1 MGP_CBAJ_G0028021.1 mouse_genomes_project 4 65789178 65854636 - MGP_CBAJ_P0065549 Pole3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065555.1 MGP_CBAJ_G0028021.1 mouse_genomes_project 4 65853902 65854606 - Pole3 protein_coding retained_intron MGP_CBAJ_T0004508.1 MGP_CBAJ_G0003909.1 mouse_genomes_project 4 163357841 163359110 + Ube4bos3 antisense antisense MGP_CBAJ_T0064466.1 MGP_CBAJ_G0027771.1 mouse_genomes_project 4 23290007 23499222 - MGP_CBAJ_P0064466 Klhl32 protein_coding protein_coding MGP_CBAJ_T0064467.1 MGP_CBAJ_G0027771.1 mouse_genomes_project 4 23290007 23553754 - MGP_CBAJ_P0064467 Klhl32 protein_coding protein_coding MGP_CBAJ_T0064468.1 MGP_CBAJ_G0027771.1 mouse_genomes_project 4 23293529 23438303 - MGP_CBAJ_P0064468 Klhl32 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064469.1 MGP_CBAJ_G0027771.1 mouse_genomes_project 4 23293618 23553561 - MGP_CBAJ_P0064469 Klhl32 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064470.1 MGP_CBAJ_G0027771.1 mouse_genomes_project 4 23294836 23553716 - MGP_CBAJ_P0064470 Klhl32 protein_coding protein_coding MGP_CBAJ_T0064471.1 MGP_CBAJ_G0027771.1 mouse_genomes_project 4 23332717 23553561 - Klhl32 protein_coding retained_intron MGP_CBAJ_T0064472.1 MGP_CBAJ_G0027771.1 mouse_genomes_project 4 23333259 23358561 - Klhl32 protein_coding processed_transcript MGP_CBAJ_T0010516.1 MGP_CBAJ_G0008654.1 mouse_genomes_project 4 149258394 149258479 + Mir7018 miRNA miRNA MGP_CBAJ_T0099283.1 MGP_CBAJ_G0037538.1 mouse_genomes_project 4 116319156 116319260 - Gm23354 snRNA snRNA MGP_CBAJ_T0064369.1 MGP_CBAJ_G0027744.1 mouse_genomes_project 4 13611319 13642428 + MGP_CBAJ_P0064369 Calb1 protein_coding protein_coding MGP_CBAJ_T0064370.1 MGP_CBAJ_G0027744.1 mouse_genomes_project 4 13611321 13628144 + Calb1 protein_coding retained_intron MGP_CBAJ_T0064371.1 MGP_CBAJ_G0027744.1 mouse_genomes_project 4 13617819 13628439 + Calb1 protein_coding retained_intron MGP_CBAJ_T0064498.1 MGP_CBAJ_G0027779.1 mouse_genomes_project 4 31546019 31607332 + MGP_CBAJ_P0064498 Map3k7 protein_coding protein_coding MGP_CBAJ_T0064499.1 MGP_CBAJ_G0027779.1 mouse_genomes_project 4 31546162 31607338 + MGP_CBAJ_P0064499 Map3k7 protein_coding protein_coding MGP_CBAJ_T0064500.1 MGP_CBAJ_G0027779.1 mouse_genomes_project 4 31559248 31568245 + Map3k7 protein_coding processed_transcript MGP_CBAJ_T0064501.1 MGP_CBAJ_G0027779.1 mouse_genomes_project 4 31561483 31566246 + Map3k7 protein_coding processed_transcript MGP_CBAJ_T0064502.1 MGP_CBAJ_G0027779.1 mouse_genomes_project 4 31563554 31572263 + Map3k7 protein_coding processed_transcript MGP_CBAJ_T0064503.1 MGP_CBAJ_G0027779.1 mouse_genomes_project 4 31566191 31599887 + Map3k7 protein_coding processed_transcript MGP_CBAJ_T0064504.1 MGP_CBAJ_G0027779.1 mouse_genomes_project 4 31571960 31603439 + Map3k7 protein_coding processed_transcript MGP_CBAJ_T0004465.1 MGP_CBAJ_G0003877.1 mouse_genomes_project 4 144774842 144779545 + Gm12977 antisense antisense MGP_CBAJ_T0004466.1 MGP_CBAJ_G0003877.1 mouse_genomes_project 4 144775489 144778771 + Gm12977 antisense antisense MGP_CBAJ_T0014218.1 MGP_CBAJ_G0012330.1 mouse_genomes_project 4 8710457 8710872 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014247.1 MGP_CBAJ_G0012359.1 mouse_genomes_project 4 16939840 16942173 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010514.1 MGP_CBAJ_G0008652.1 mouse_genomes_project 4 148105632 148105691 - Gm22180 miRNA miRNA MGP_CBAJ_T0065644.1 MGP_CBAJ_G0028049.1 mouse_genomes_project 4 76278859 76365686 - MGP_CBAJ_P0065644 Tle1 protein_coding protein_coding MGP_CBAJ_T0065645.1 MGP_CBAJ_G0028049.1 mouse_genomes_project 4 76279522 76365624 - MGP_CBAJ_P0065645 Tle1 protein_coding protein_coding MGP_CBAJ_T0065646.1 MGP_CBAJ_G0028049.1 mouse_genomes_project 4 76279524 76365621 - MGP_CBAJ_P0065646 Tle1 protein_coding protein_coding MGP_CBAJ_T0065647.1 MGP_CBAJ_G0028049.1 mouse_genomes_project 4 76279527 76363859 - Tle1 protein_coding retained_intron MGP_CBAJ_T0065648.1 MGP_CBAJ_G0028049.1 mouse_genomes_project 4 76279922 76364919 - MGP_CBAJ_P0065648 Tle1 protein_coding protein_coding MGP_CBAJ_T0065649.1 MGP_CBAJ_G0028049.1 mouse_genomes_project 4 76279937 76282454 - Tle1 protein_coding processed_transcript MGP_CBAJ_T0065650.1 MGP_CBAJ_G0028049.1 mouse_genomes_project 4 76303025 76305751 - MGP_CBAJ_P0065650 Tle1 protein_coding protein_coding MGP_CBAJ_T0065651.1 MGP_CBAJ_G0028049.1 mouse_genomes_project 4 76321965 76365629 - MGP_CBAJ_P0065651 Tle1 protein_coding protein_coding MGP_CBAJ_T0065652.1 MGP_CBAJ_G0028049.1 mouse_genomes_project 4 76322657 76364259 - MGP_CBAJ_P0065652 Tle1 protein_coding protein_coding MGP_CBAJ_T0065653.1 MGP_CBAJ_G0028049.1 mouse_genomes_project 4 76331567 76365660 - Tle1 protein_coding processed_transcript MGP_CBAJ_T0067495.1 MGP_CBAJ_G0028466.1 mouse_genomes_project 4 138669063 138672240 - MGP_CBAJ_P0067495 Tlr12 protein_coding protein_coding MGP_CBAJ_T0067496.1 MGP_CBAJ_G0028466.1 mouse_genomes_project 4 138671122 138672213 - Tlr12 protein_coding processed_transcript MGP_CBAJ_T0014332.1 MGP_CBAJ_G0012444.1 mouse_genomes_project 4 45550392 45550808 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014225.1 MGP_CBAJ_G0012337.1 mouse_genomes_project 4 12324573 12324804 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099305.1 MGP_CBAJ_G0037560.1 mouse_genomes_project 4 140267496 140267648 + Gm23845 snRNA snRNA MGP_CBAJ_T0014592.1 MGP_CBAJ_G0012704.1 mouse_genomes_project 4 148833596 148834229 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064591.1 MGP_CBAJ_G0027800.1 mouse_genomes_project 4 34604915 34653545 - MGP_CBAJ_P0064591 Cfap206 protein_coding unknown_likely_coding MGP_CBAJ_T0064592.1 MGP_CBAJ_G0027800.1 mouse_genomes_project 4 34605092 34640644 - Cfap206 protein_coding processed_transcript MGP_CBAJ_T0064593.1 MGP_CBAJ_G0027800.1 mouse_genomes_project 4 34630543 34653529 - MGP_CBAJ_P0064593 Cfap206 protein_coding protein_coding MGP_CBAJ_T0064594.1 MGP_CBAJ_G0027800.1 mouse_genomes_project 4 34642429 34653546 - MGP_CBAJ_P0064594 Cfap206 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064595.1 MGP_CBAJ_G0027800.1 mouse_genomes_project 4 34642460 34653546 - MGP_CBAJ_P0064595 Cfap206 protein_coding protein_coding MGP_CBAJ_T0064596.1 MGP_CBAJ_G0027800.1 mouse_genomes_project 4 34644576 34653546 - Cfap206 protein_coding processed_transcript MGP_CBAJ_T0014569.1 MGP_CBAJ_G0012681.1 mouse_genomes_project 4 138961480 138962484 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100593.1 MGP_CBAJ_G0038848.1 mouse_genomes_project 4 148594331 148594460 + Gm23834 snoRNA snoRNA MGP_CBAJ_T0101883.1 MGP_CBAJ_G0039914.1 mouse_genomes_project 4 44828802 44829105 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0017852.1 MGP_CBAJ_G0015324.1 mouse_genomes_project 4 166914116 166915540 - Gm13645 processed_transcript processed_transcript MGP_CBAJ_T0017853.1 MGP_CBAJ_G0015325.1 mouse_genomes_project 4 166991115 166995002 - Gm16334 processed_transcript processed_transcript MGP_CBAJ_T0100507.1 MGP_CBAJ_G0038762.1 mouse_genomes_project 4 292131 292268 - Gm22781 snoRNA snoRNA MGP_CBAJ_T0004461.1 MGP_CBAJ_G0003873.1 mouse_genomes_project 4 141165608 141167528 - Gm26716 antisense antisense MGP_CBAJ_T0065283.1 MGP_CBAJ_G0027942.1 mouse_genomes_project 4 50289294 50376384 + MGP_CBAJ_P0065283 Tmeff1 protein_coding protein_coding MGP_CBAJ_T0065284.1 MGP_CBAJ_G0027942.1 mouse_genomes_project 4 50289485 50375338 + MGP_CBAJ_P0065284 Tmeff1 protein_coding protein_coding MGP_CBAJ_T0065285.1 MGP_CBAJ_G0027942.1 mouse_genomes_project 4 50289671 50375723 + MGP_CBAJ_P0065285 Tmeff1 protein_coding protein_coding MGP_CBAJ_T0065286.1 MGP_CBAJ_G0027942.1 mouse_genomes_project 4 50345712 50373492 + MGP_CBAJ_P0065286 Tmeff1 protein_coding protein_coding MGP_CBAJ_T0065433.1 MGP_CBAJ_G0027987.1 mouse_genomes_project 4 60775076 60788071 - MGP_CBAJ_P0065433 Txn1 protein_coding protein_coding MGP_CBAJ_T0007789.1 MGP_CBAJ_G0006361.1 mouse_genomes_project 4 98010639 98015541 + Gm12670 lincRNA lincRNA MGP_CBAJ_T0065469.1 MGP_CBAJ_G0027994.1 mouse_genomes_project 4 61882379 61897878 + MGP_CBAJ_P0065469 Zkscan16 protein_coding protein_coding MGP_CBAJ_T0064549.1 MGP_CBAJ_G0027789.1 mouse_genomes_project 4 32862831 32897964 + MGP_CBAJ_P0064549 Gabrr1 protein_coding protein_coding MGP_CBAJ_T0067216.1 MGP_CBAJ_G0028398.1 mouse_genomes_project 4 132707465 132718932 + MGP_CBAJ_P0067216 Hpcal4 protein_coding protein_coding MGP_CBAJ_T0067217.1 MGP_CBAJ_G0028398.1 mouse_genomes_project 4 132707477 132715744 + MGP_CBAJ_P0067217 Hpcal4 protein_coding protein_coding MGP_CBAJ_T0067218.1 MGP_CBAJ_G0028398.1 mouse_genomes_project 4 132707737 132713029 + MGP_CBAJ_P0067218 Hpcal4 protein_coding protein_coding MGP_CBAJ_T0067219.1 MGP_CBAJ_G0028398.1 mouse_genomes_project 4 132707754 132708392 + Hpcal4 protein_coding processed_transcript MGP_CBAJ_T0067220.1 MGP_CBAJ_G0028398.1 mouse_genomes_project 4 132707967 132714975 + MGP_CBAJ_P0067220 Hpcal4 protein_coding protein_coding MGP_CBAJ_T0004431.1 MGP_CBAJ_G0003849.1 mouse_genomes_project 4 126359322 126368221 + Gm12828 antisense antisense MGP_CBAJ_T0014238.1 MGP_CBAJ_G0012350.1 mouse_genomes_project 4 14161326 14162543 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014370.1 MGP_CBAJ_G0012482.1 mouse_genomes_project 4 57979881 57980233 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064905.1 MGP_CBAJ_G0027867.1 mouse_genomes_project 4 44358943 44404078 + MGP_CBAJ_P0064905 Rusc2 protein_coding protein_coding MGP_CBAJ_T0064906.1 MGP_CBAJ_G0027867.1 mouse_genomes_project 4 44359021 44391742 + MGP_CBAJ_P0064906 Rusc2 protein_coding protein_coding MGP_CBAJ_T0064907.1 MGP_CBAJ_G0027867.1 mouse_genomes_project 4 44359034 44393136 + Rusc2 protein_coding processed_transcript MGP_CBAJ_T0064908.1 MGP_CBAJ_G0027867.1 mouse_genomes_project 4 44360406 44391786 + MGP_CBAJ_P0064908 Rusc2 protein_coding protein_coding MGP_CBAJ_T0064909.1 MGP_CBAJ_G0027867.1 mouse_genomes_project 4 44360467 44391701 + MGP_CBAJ_P0064909 Rusc2 protein_coding protein_coding MGP_CBAJ_T0064910.1 MGP_CBAJ_G0027867.1 mouse_genomes_project 4 44361247 44398903 + Rusc2 protein_coding processed_transcript MGP_CBAJ_T0064911.1 MGP_CBAJ_G0027867.1 mouse_genomes_project 4 44361298 44391839 + MGP_CBAJ_P0064911 Rusc2 protein_coding protein_coding MGP_CBAJ_T0064912.1 MGP_CBAJ_G0027867.1 mouse_genomes_project 4 44378136 44404063 + Rusc2 protein_coding retained_intron MGP_CBAJ_T0064913.1 MGP_CBAJ_G0027867.1 mouse_genomes_project 4 44378151 44391685 + MGP_CBAJ_P0064913 Rusc2 protein_coding protein_coding MGP_CBAJ_T0064914.1 MGP_CBAJ_G0027867.1 mouse_genomes_project 4 44383377 44404078 + MGP_CBAJ_P0064914 Rusc2 protein_coding protein_coding MGP_CBAJ_T0064915.1 MGP_CBAJ_G0027867.1 mouse_genomes_project 4 44383444 44399438 + Rusc2 protein_coding processed_transcript MGP_CBAJ_T0064916.1 MGP_CBAJ_G0027867.1 mouse_genomes_project 4 44383479 44404082 + MGP_CBAJ_P0064916 Rusc2 protein_coding protein_coding MGP_CBAJ_T0064917.1 MGP_CBAJ_G0027867.1 mouse_genomes_project 4 44383499 44392125 + MGP_CBAJ_P0064917 Rusc2 protein_coding protein_coding MGP_CBAJ_T0064918.1 MGP_CBAJ_G0027867.1 mouse_genomes_project 4 44391641 44404078 + MGP_CBAJ_P0064918 Rusc2 protein_coding protein_coding MGP_CBAJ_T0064919.1 MGP_CBAJ_G0027867.1 mouse_genomes_project 4 44391641 44403626 + MGP_CBAJ_P0064919 Rusc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064920.1 MGP_CBAJ_G0027867.1 mouse_genomes_project 4 44393383 44403342 + Rusc2 protein_coding processed_transcript MGP_CBAJ_T0064921.1 MGP_CBAJ_G0027867.1 mouse_genomes_project 4 44399474 44401356 + Rusc2 protein_coding retained_intron MGP_CBAJ_T0064922.1 MGP_CBAJ_G0027867.1 mouse_genomes_project 4 44400573 44400994 + Rusc2 protein_coding retained_intron MGP_CBAJ_T0065142.1 MGP_CBAJ_G0027908.1 mouse_genomes_project 4 46591746 46595761 - MGP_CBAJ_P0065142 Exosc3 protein_coding protein_coding MGP_CBAJ_T0065143.1 MGP_CBAJ_G0027908.1 mouse_genomes_project 4 46591927 46595468 - Exosc3 protein_coding processed_transcript MGP_CBAJ_T0065144.1 MGP_CBAJ_G0027908.1 mouse_genomes_project 4 46592087 46619655 - MGP_CBAJ_P0065144 Exosc3 protein_coding protein_coding MGP_CBAJ_T0065145.1 MGP_CBAJ_G0027908.1 mouse_genomes_project 4 46592620 46595736 - Exosc3 protein_coding processed_transcript MGP_CBAJ_T0067538.1 MGP_CBAJ_G0028475.1 mouse_genomes_project 4 139245007 139258876 - MGP_CBAJ_P0067538 Hpca protein_coding protein_coding MGP_CBAJ_T0067539.1 MGP_CBAJ_G0028475.1 mouse_genomes_project 4 139245008 139255807 - MGP_CBAJ_P0067539 Hpca protein_coding protein_coding MGP_CBAJ_T0067540.1 MGP_CBAJ_G0028475.1 mouse_genomes_project 4 139245014 139258580 - MGP_CBAJ_P0067540 Hpca protein_coding protein_coding MGP_CBAJ_T0067541.1 MGP_CBAJ_G0028475.1 mouse_genomes_project 4 139245014 139258131 - MGP_CBAJ_P0067541 Hpca protein_coding protein_coding MGP_CBAJ_T0067542.1 MGP_CBAJ_G0028475.1 mouse_genomes_project 4 139245698 139257786 - MGP_CBAJ_P0067542 Hpca protein_coding protein_coding MGP_CBAJ_T0067543.1 MGP_CBAJ_G0028475.1 mouse_genomes_project 4 139245712 139258729 - MGP_CBAJ_P0067543 Hpca protein_coding protein_coding MGP_CBAJ_T0067544.1 MGP_CBAJ_G0028475.1 mouse_genomes_project 4 139245887 139258765 - MGP_CBAJ_P0067544 Hpca protein_coding protein_coding MGP_CBAJ_T0067545.1 MGP_CBAJ_G0028475.1 mouse_genomes_project 4 139249504 139258579 - MGP_CBAJ_P0067545 Hpca protein_coding protein_coding MGP_CBAJ_T0067546.1 MGP_CBAJ_G0028475.1 mouse_genomes_project 4 139255444 139258548 - MGP_CBAJ_P0067546 Hpca protein_coding protein_coding MGP_CBAJ_T0007781.1 MGP_CBAJ_G0006355.1 mouse_genomes_project 4 89686372 89690312 - Gm12414 lincRNA lincRNA MGP_CBAJ_T0007873.1 MGP_CBAJ_G0006422.1 mouse_genomes_project 4 141379975 141385094 - A930031H19Rik lincRNA lincRNA MGP_CBAJ_T0007874.1 MGP_CBAJ_G0006422.1 mouse_genomes_project 4 141379975 141391112 - A930031H19Rik lincRNA lincRNA MGP_CBAJ_T0067754.1 MGP_CBAJ_G0028515.1 mouse_genomes_project 4 140986457 141115665 + MGP_CBAJ_P0067754 Pum1 protein_coding protein_coding MGP_CBAJ_T0067755.1 MGP_CBAJ_G0028515.1 mouse_genomes_project 4 140986495 141115663 + MGP_CBAJ_P0067755 Pum1 protein_coding protein_coding MGP_CBAJ_T0067756.1 MGP_CBAJ_G0028515.1 mouse_genomes_project 4 140986495 141115663 + MGP_CBAJ_P0067756 Pum1 protein_coding protein_coding MGP_CBAJ_T0067757.1 MGP_CBAJ_G0028515.1 mouse_genomes_project 4 140986502 141044816 + Pum1 protein_coding retained_intron MGP_CBAJ_T0067758.1 MGP_CBAJ_G0028515.1 mouse_genomes_project 4 140986503 141072939 + MGP_CBAJ_P0067758 Pum1 protein_coding protein_coding MGP_CBAJ_T0067759.1 MGP_CBAJ_G0028515.1 mouse_genomes_project 4 140986522 141114367 + MGP_CBAJ_P0067759 Pum1 protein_coding protein_coding MGP_CBAJ_T0067760.1 MGP_CBAJ_G0028515.1 mouse_genomes_project 4 140986542 141114355 + MGP_CBAJ_P0067760 Pum1 protein_coding protein_coding MGP_CBAJ_T0014460.1 MGP_CBAJ_G0012572.1 mouse_genomes_project 4 102314560 102314889 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0068206.1 MGP_CBAJ_G0028612.1 mouse_genomes_project 4 147184256 147194504 + MGP_CBAJ_P0068206 Srsf10 protein_coding protein_coding MGP_CBAJ_T0068207.1 MGP_CBAJ_G0028612.1 mouse_genomes_project 4 147184256 147194504 + MGP_CBAJ_P0068207 Srsf10 protein_coding protein_coding MGP_CBAJ_T0068208.1 MGP_CBAJ_G0028612.1 mouse_genomes_project 4 147184621 147187310 + Srsf10 protein_coding processed_transcript MGP_CBAJ_T0068209.1 MGP_CBAJ_G0028612.1 mouse_genomes_project 4 147184641 147187740 + Srsf10 protein_coding processed_transcript MGP_CBAJ_T0068210.1 MGP_CBAJ_G0028612.1 mouse_genomes_project 4 147190296 147192174 + Srsf10 protein_coding processed_transcript MGP_CBAJ_T0068211.1 MGP_CBAJ_G0028612.1 mouse_genomes_project 4 147190328 147192568 + Srsf10 protein_coding processed_transcript MGP_CBAJ_T0068212.1 MGP_CBAJ_G0028612.1 mouse_genomes_project 4 147191805 147192611 + Srsf10 protein_coding processed_transcript MGP_CBAJ_T0001376.1 MGP_CBAJ_G0001302.1 mouse_genomes_project 4 106570205 106579809 - TEC TEC MGP_CBAJ_T0007766.1 MGP_CBAJ_G0006342.1 mouse_genomes_project 4 67558475 67572656 + lincRNA lincRNA MGP_CBAJ_T0064650.1 MGP_CBAJ_G0027815.1 mouse_genomes_project 4 41339799 41364591 - MGP_CBAJ_P0064650 Aptx protein_coding protein_coding MGP_CBAJ_T0064651.1 MGP_CBAJ_G0027815.1 mouse_genomes_project 4 41339799 41364871 - MGP_CBAJ_P0064651 Aptx protein_coding protein_coding MGP_CBAJ_T0064652.1 MGP_CBAJ_G0027815.1 mouse_genomes_project 4 41342339 41364839 - MGP_CBAJ_P0064652 Aptx protein_coding protein_coding MGP_CBAJ_T0064653.1 MGP_CBAJ_G0027815.1 mouse_genomes_project 4 41344100 41364864 - MGP_CBAJ_P0064653 Aptx protein_coding nonsense_mediated_decay MGP_CBAJ_T0064654.1 MGP_CBAJ_G0027815.1 mouse_genomes_project 4 41351558 41356198 - Aptx protein_coding processed_transcript MGP_CBAJ_T0064655.1 MGP_CBAJ_G0027815.1 mouse_genomes_project 4 41356710 41364393 - MGP_CBAJ_P0064655 Aptx protein_coding nonsense_mediated_decay MGP_CBAJ_T0010471.1 MGP_CBAJ_G0008609.1 mouse_genomes_project 4 66644006 66644088 + Mir455 miRNA miRNA MGP_CBAJ_T0066250.1 MGP_CBAJ_G0028191.1 mouse_genomes_project 4 114840020 114854393 + MGP_CBAJ_P0066250 Fam151a protein_coding protein_coding MGP_CBAJ_T0067524.1 MGP_CBAJ_G0028472.1 mouse_genomes_project 4 139111054 139121354 + Ak2 protein_coding processed_transcript MGP_CBAJ_T0067525.1 MGP_CBAJ_G0028472.1 mouse_genomes_project 4 139112320 139132637 + MGP_CBAJ_P0067525 Ak2 protein_coding protein_coding MGP_CBAJ_T0067526.1 MGP_CBAJ_G0028472.1 mouse_genomes_project 4 139112320 139129525 + MGP_CBAJ_P0067526 Ak2 protein_coding protein_coding MGP_CBAJ_T0067527.1 MGP_CBAJ_G0028472.1 mouse_genomes_project 4 139112449 139129353 + MGP_CBAJ_P0067527 Ak2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066824.1 MGP_CBAJ_G0028300.1 mouse_genomes_project 4 125626871 125628675 - MGP_CBAJ_P0066824 Hpdl protein_coding protein_coding MGP_CBAJ_T0065882.1 MGP_CBAJ_G0028098.1 mouse_genomes_project 4 94954076 94957489 + MGP_CBAJ_P0065882 protein_coding protein_coding MGP_CBAJ_T0068827.1 MGP_CBAJ_G0028785.1 mouse_genomes_project 4 161929993 161935779 + MGP_CBAJ_P0068827 Fbxo2 protein_coding protein_coding MGP_CBAJ_T0066881.1 MGP_CBAJ_G0028311.1 mouse_genomes_project 4 126094392 126145344 - MGP_CBAJ_P0066881 Gm1661 protein_coding protein_coding MGP_CBAJ_T0066882.1 MGP_CBAJ_G0028311.1 mouse_genomes_project 4 126096254 126145344 - MGP_CBAJ_P0066882 Gm1661 protein_coding protein_coding MGP_CBAJ_T0066883.1 MGP_CBAJ_G0028311.1 mouse_genomes_project 4 126132080 126145552 - Gm1661 protein_coding processed_transcript MGP_CBAJ_T0100532.1 MGP_CBAJ_G0038787.1 mouse_genomes_project 4 49549222 49549365 + Gm22670 snoRNA snoRNA MGP_CBAJ_T0066080.1 MGP_CBAJ_G0028148.1 mouse_genomes_project 4 107205769 107276887 + MGP_CBAJ_P0066080 Pgm2 protein_coding protein_coding MGP_CBAJ_T0066081.1 MGP_CBAJ_G0028148.1 mouse_genomes_project 4 107232027 107276887 + MGP_CBAJ_P0066081 Pgm2 protein_coding protein_coding MGP_CBAJ_T0097819.1 MGP_CBAJ_G0036092.1 mouse_genomes_project 4 170729099 170731239 + pseudogene pseudogene MGP_CBAJ_T0007856.1 MGP_CBAJ_G0006410.1 mouse_genomes_project 4 137786833 137788369 - 1700112K13Rik lincRNA lincRNA MGP_CBAJ_T0065879.1 MGP_CBAJ_G0028095.1 mouse_genomes_project 4 94805338 94809524 - MGP_CBAJ_P0065879 Klhl9 protein_coding protein_coding MGP_CBAJ_T0067689.1 MGP_CBAJ_G0028502.1 mouse_genomes_project 4 140322488 140352968 + MGP_CBAJ_P0067689 Spocd1 protein_coding unknown_likely_coding MGP_CBAJ_T0067690.1 MGP_CBAJ_G0028502.1 mouse_genomes_project 4 140340795 140346764 + MGP_CBAJ_P0067690 Spocd1 protein_coding protein_coding MGP_CBAJ_T0067691.1 MGP_CBAJ_G0028502.1 mouse_genomes_project 4 140340969 140353090 + MGP_CBAJ_P0067691 Spocd1 protein_coding protein_coding MGP_CBAJ_T0004452.1 MGP_CBAJ_G0003867.1 mouse_genomes_project 4 138139344 138172931 - Csmd2os antisense antisense MGP_CBAJ_T0004453.1 MGP_CBAJ_G0003867.1 mouse_genomes_project 4 138139344 138170788 - Csmd2os antisense antisense MGP_CBAJ_T0007797.1 MGP_CBAJ_G0006368.1 mouse_genomes_project 4 102153349 102154162 - Gm29064 lincRNA lincRNA MGP_CBAJ_T0068427.1 MGP_CBAJ_G0028663.1 mouse_genomes_project 4 150729107 150750478 + MGP_CBAJ_P0068427 Pla2g2c protein_coding protein_coding MGP_CBAJ_T0068428.1 MGP_CBAJ_G0028663.1 mouse_genomes_project 4 150729639 150748039 + MGP_CBAJ_P0068428 Pla2g2c protein_coding protein_coding MGP_CBAJ_T0068429.1 MGP_CBAJ_G0028663.1 mouse_genomes_project 4 150729639 150748920 + MGP_CBAJ_P0068429 Pla2g2c protein_coding protein_coding MGP_CBAJ_T0068710.1 MGP_CBAJ_G0028741.1 mouse_genomes_project 4 157133591 157165323 + protein_coding processed_transcript MGP_CBAJ_T0068712.1 MGP_CBAJ_G0028741.1 mouse_genomes_project 4 157133602 157166335 + MGP_CBAJ_P0068712 protein_coding protein_coding MGP_CBAJ_T0068713.1 MGP_CBAJ_G0028741.1 mouse_genomes_project 4 157133605 157167151 + protein_coding processed_transcript MGP_CBAJ_T0068716.1 MGP_CBAJ_G0028741.1 mouse_genomes_project 4 157164696 157171707 + MGP_CBAJ_P0068716 protein_coding protein_coding MGP_CBAJ_T0064838.1 MGP_CBAJ_G0027859.1 mouse_genomes_project 4 43910995 43912722 + 1700022I11Rik protein_coding processed_transcript MGP_CBAJ_T0064839.1 MGP_CBAJ_G0027859.1 mouse_genomes_project 4 43911022 43912688 + MGP_CBAJ_P0064839 1700022I11Rik protein_coding protein_coding MGP_CBAJ_T0064840.1 MGP_CBAJ_G0027859.1 mouse_genomes_project 4 43911323 43912878 + MGP_CBAJ_P0064840 1700022I11Rik protein_coding protein_coding MGP_CBAJ_T0064841.1 MGP_CBAJ_G0027859.1 mouse_genomes_project 4 43911335 43915716 + MGP_CBAJ_P0064841 1700022I11Rik protein_coding protein_coding MGP_CBAJ_T0098392.1 MGP_CBAJ_G0036658.1 mouse_genomes_project 4 154650428 154656111 - Gm13053 sense_intronic sense_intronic MGP_CBAJ_T0065113.1 MGP_CBAJ_G0027902.1 mouse_genomes_project 4 46207204 46216544 + MGP_CBAJ_P0065113 Grhpr protein_coding protein_coding MGP_CBAJ_T0065114.1 MGP_CBAJ_G0027902.1 mouse_genomes_project 4 46207212 46209753 + MGP_CBAJ_P0065114 Grhpr protein_coding protein_coding MGP_CBAJ_T0065115.1 MGP_CBAJ_G0027902.1 mouse_genomes_project 4 46207241 46214820 + MGP_CBAJ_P0065115 Grhpr protein_coding protein_coding MGP_CBAJ_T0065116.1 MGP_CBAJ_G0027902.1 mouse_genomes_project 4 46207242 46213137 + Grhpr protein_coding processed_transcript MGP_CBAJ_T0065117.1 MGP_CBAJ_G0027902.1 mouse_genomes_project 4 46207270 46213058 + MGP_CBAJ_P0065117 Grhpr protein_coding nonsense_mediated_decay MGP_CBAJ_T0065118.1 MGP_CBAJ_G0027902.1 mouse_genomes_project 4 46207309 46212200 + Grhpr protein_coding processed_transcript MGP_CBAJ_T0010450.1 MGP_CBAJ_G0008588.1 mouse_genomes_project 4 13678229 13678321 - Mir6400 miRNA miRNA MGP_CBAJ_T0068704.1 MGP_CBAJ_G0028736.1 mouse_genomes_project 4 156571311 156574414 + MGP_CBAJ_P0068704 protein_coding protein_coding MGP_CBAJ_T0014382.1 MGP_CBAJ_G0012494.1 mouse_genomes_project 4 66984508 66984755 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065080.1 MGP_CBAJ_G0027899.1 mouse_genomes_project 4 45455770 45526533 + MGP_CBAJ_P0065080 Melk protein_coding protein_coding MGP_CBAJ_T0065081.1 MGP_CBAJ_G0027899.1 mouse_genomes_project 4 45457559 45487640 + MGP_CBAJ_P0065081 Melk protein_coding protein_coding MGP_CBAJ_T0065082.1 MGP_CBAJ_G0027899.1 mouse_genomes_project 4 45458460 45486215 + Melk protein_coding processed_transcript MGP_CBAJ_T0065083.1 MGP_CBAJ_G0027899.1 mouse_genomes_project 4 45458460 45480027 + MGP_CBAJ_P0065083 Melk protein_coding protein_coding MGP_CBAJ_T0065870.1 MGP_CBAJ_G0028090.1 mouse_genomes_project 4 94673166 94673739 - MGP_CBAJ_P0065870 Ifna9 protein_coding protein_coding MGP_CBAJ_T0011429.1 MGP_CBAJ_G0009567.1 mouse_genomes_project 4 16807241 16807572 - Gm24419 misc_RNA misc_RNA MGP_CBAJ_T0065523.1 MGP_CBAJ_G0028014.1 mouse_genomes_project 4 65572258 65610321 - Fkbp15 protein_coding processed_transcript MGP_CBAJ_T0065524.1 MGP_CBAJ_G0028014.1 mouse_genomes_project 4 65572258 65641652 - MGP_CBAJ_P0065524 Fkbp15 protein_coding protein_coding MGP_CBAJ_T0065525.1 MGP_CBAJ_G0028014.1 mouse_genomes_project 4 65587146 65641730 - MGP_CBAJ_P0065525 Fkbp15 protein_coding protein_coding MGP_CBAJ_T0065526.1 MGP_CBAJ_G0028014.1 mouse_genomes_project 4 65594500 65641676 - MGP_CBAJ_P0065526 Fkbp15 protein_coding protein_coding MGP_CBAJ_T0065527.1 MGP_CBAJ_G0028014.1 mouse_genomes_project 4 65596516 65641716 - MGP_CBAJ_P0065527 Fkbp15 protein_coding protein_coding MGP_CBAJ_T0065528.1 MGP_CBAJ_G0028014.1 mouse_genomes_project 4 65622392 65641651 - Fkbp15 protein_coding processed_transcript MGP_CBAJ_T0065866.1 MGP_CBAJ_G0028086.1 mouse_genomes_project 4 94596464 94597214 - MGP_CBAJ_P0065866 Ifnb1 protein_coding protein_coding MGP_CBAJ_T0004338.1 MGP_CBAJ_G0003780.1 mouse_genomes_project 4 8941633 8946641 - Gm11832 antisense antisense MGP_CBAJ_T0010497.1 MGP_CBAJ_G0008635.1 mouse_genomes_project 4 134414240 134414349 + Mir698 miRNA miRNA MGP_CBAJ_T0100575.1 MGP_CBAJ_G0038830.1 mouse_genomes_project 4 130920102 130920234 + Gm26162 snoRNA snoRNA MGP_CBAJ_T0014568.1 MGP_CBAJ_G0012680.1 mouse_genomes_project 4 137352520 137352940 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0066836.1 MGP_CBAJ_G0028303.1 mouse_genomes_project 4 125837545 125847203 + MGP_CBAJ_P0066836 Hectd3 protein_coding protein_coding MGP_CBAJ_T0066837.1 MGP_CBAJ_G0028303.1 mouse_genomes_project 4 125840454 125842241 + Hectd3 protein_coding retained_intron MGP_CBAJ_T0066838.1 MGP_CBAJ_G0028303.1 mouse_genomes_project 4 125844782 125845380 + Hectd3 protein_coding retained_intron MGP_CBAJ_T0017817.1 MGP_CBAJ_G0015307.1 mouse_genomes_project 4 116988554 117017631 - Gm12743 processed_transcript processed_transcript MGP_CBAJ_T0007911.1 MGP_CBAJ_G0006448.1 mouse_genomes_project 4 152623414 152652972 + Gm13026 lincRNA lincRNA MGP_CBAJ_T0007810.1 MGP_CBAJ_G0006379.1 mouse_genomes_project 4 111026541 111048904 + 4930456L15Rik lincRNA lincRNA MGP_CBAJ_T0007846.1 MGP_CBAJ_G0006405.1 mouse_genomes_project 4 134964189 134977326 + 1700041M05Rik lincRNA lincRNA MGP_CBAJ_T0069116.1 MGP_CBAJ_G0028839.1 mouse_genomes_project 4 166696137 166823655 + MGP_CBAJ_P0069116 Acot7 protein_coding protein_coding MGP_CBAJ_T0069117.1 MGP_CBAJ_G0028839.1 mouse_genomes_project 4 166703768 166753526 + Acot7 protein_coding processed_transcript MGP_CBAJ_T0069118.1 MGP_CBAJ_G0028839.1 mouse_genomes_project 4 166704137 166823658 + MGP_CBAJ_P0069118 Acot7 protein_coding protein_coding MGP_CBAJ_T0069119.1 MGP_CBAJ_G0028839.1 mouse_genomes_project 4 166704209 166823650 + MGP_CBAJ_P0069119 Acot7 protein_coding protein_coding MGP_CBAJ_T0069120.1 MGP_CBAJ_G0028839.1 mouse_genomes_project 4 166723900 166823650 + MGP_CBAJ_P0069120 Acot7 protein_coding protein_coding MGP_CBAJ_T0069121.1 MGP_CBAJ_G0028839.1 mouse_genomes_project 4 166723958 166753606 + Acot7 protein_coding processed_transcript MGP_CBAJ_T0065986.1 MGP_CBAJ_G0028131.1 mouse_genomes_project 4 104062658 104062985 - MGP_CBAJ_P0065986 Gm10192 protein_coding protein_coding MGP_CBAJ_T0007711.1 MGP_CBAJ_G0006294.1 mouse_genomes_project 4 18255130 18265321 - 4930598A11Rik lincRNA lincRNA MGP_CBAJ_T0067212.1 MGP_CBAJ_G0028397.1 mouse_genomes_project 4 132650370 132664174 - MGP_CBAJ_P0067212 Ppie protein_coding protein_coding MGP_CBAJ_T0067213.1 MGP_CBAJ_G0028397.1 mouse_genomes_project 4 132650575 132661123 - Ppie protein_coding processed_transcript MGP_CBAJ_T0067214.1 MGP_CBAJ_G0028397.1 mouse_genomes_project 4 132650956 132663249 - Ppie protein_coding processed_transcript MGP_CBAJ_T0067215.1 MGP_CBAJ_G0028397.1 mouse_genomes_project 4 132660626 132664153 - Ppie protein_coding processed_transcript MGP_CBAJ_T0004379.1 MGP_CBAJ_G0003814.1 mouse_genomes_project 4 66789115 66804037 + Aknaos antisense antisense MGP_CBAJ_T0017792.1 MGP_CBAJ_G0015289.1 mouse_genomes_project 4 55149250 55165237 + 4930552N02Rik processed_transcript processed_transcript MGP_CBAJ_T0010453.1 MGP_CBAJ_G0008591.1 mouse_genomes_project 4 22190206 22190296 - Gm25978 miRNA miRNA MGP_CBAJ_T0007808.1 MGP_CBAJ_G0006377.1 mouse_genomes_project 4 108871284 108877662 + Gm12798 lincRNA lincRNA MGP_CBAJ_T0014541.1 MGP_CBAJ_G0012653.1 mouse_genomes_project 4 128744762 128745165 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0068895.1 MGP_CBAJ_G0028798.1 mouse_genomes_project 4 163120593 163122318 - MGP_CBAJ_P0068895 Cort protein_coding protein_coding MGP_CBAJ_T0004331.1 MGP_CBAJ_G0003775.1 mouse_genomes_project 4 3098006 3108040 - antisense antisense MGP_CBAJ_T0004332.1 MGP_CBAJ_G0003775.1 mouse_genomes_project 4 3101559 3108040 - antisense antisense MGP_CBAJ_T0100594.1 MGP_CBAJ_G0038849.1 mouse_genomes_project 4 155980010 155980142 + Gm22039 snoRNA snoRNA MGP_CBAJ_T0100510.1 MGP_CBAJ_G0038765.1 mouse_genomes_project 4 1326224 1326356 + Gm26436 snoRNA snoRNA MGP_CBAJ_T0098042.1 MGP_CBAJ_G0036315.1 mouse_genomes_project 4 50496436 50496548 - Gm24573 rRNA rRNA MGP_CBAJ_T0068291.1 MGP_CBAJ_G0028631.1 mouse_genomes_project 4 148041678 148098545 - MGP_CBAJ_P0068291 Kdm1a protein_coding protein_coding MGP_CBAJ_T0068292.1 MGP_CBAJ_G0028631.1 mouse_genomes_project 4 148041682 148098509 - MGP_CBAJ_P0068292 Kdm1a protein_coding protein_coding MGP_CBAJ_T0068293.1 MGP_CBAJ_G0028631.1 mouse_genomes_project 4 148041992 148098130 - MGP_CBAJ_P0068293 Kdm1a protein_coding protein_coding MGP_CBAJ_T0068294.1 MGP_CBAJ_G0028631.1 mouse_genomes_project 4 148042021 148043685 - Kdm1a protein_coding retained_intron MGP_CBAJ_T0068295.1 MGP_CBAJ_G0028631.1 mouse_genomes_project 4 148043016 148044315 - Kdm1a protein_coding retained_intron MGP_CBAJ_T0068296.1 MGP_CBAJ_G0028631.1 mouse_genomes_project 4 148044263 148046455 - Kdm1a protein_coding retained_intron MGP_CBAJ_T0068297.1 MGP_CBAJ_G0028631.1 mouse_genomes_project 4 148046337 148052448 - Kdm1a protein_coding retained_intron MGP_CBAJ_T0068298.1 MGP_CBAJ_G0028631.1 mouse_genomes_project 4 148046365 148059553 - MGP_CBAJ_P0068298 Kdm1a protein_coding protein_coding MGP_CBAJ_T0068299.1 MGP_CBAJ_G0028631.1 mouse_genomes_project 4 148049479 148068241 - MGP_CBAJ_P0068299 Kdm1a protein_coding protein_coding MGP_CBAJ_T0101884.1 MGP_CBAJ_G0039915.1 mouse_genomes_project 4 44848046 44851419 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0004425.1 MGP_CBAJ_G0003844.1 mouse_genomes_project 4 124540434 124540694 - Gm29434 antisense antisense MGP_CBAJ_T0007915.1 MGP_CBAJ_G0006452.1 mouse_genomes_project 4 153774814 153777854 + Gm13074 lincRNA lincRNA MGP_CBAJ_T0067399.1 MGP_CBAJ_G0028442.1 mouse_genomes_project 4 136098823 136117316 - MGP_CBAJ_P0067399 Ago3 protein_coding protein_coding MGP_CBAJ_T0067400.1 MGP_CBAJ_G0028442.1 mouse_genomes_project 4 136099726 136200513 - MGP_CBAJ_P0067400 Ago3 protein_coding protein_coding MGP_CBAJ_T0067401.1 MGP_CBAJ_G0028442.1 mouse_genomes_project 4 136112572 136117898 - MGP_CBAJ_P0067401 Ago3 protein_coding protein_coding MGP_CBAJ_T0067402.1 MGP_CBAJ_G0028442.1 mouse_genomes_project 4 136141037 136170553 - Ago3 protein_coding processed_transcript MGP_CBAJ_T0067403.1 MGP_CBAJ_G0028442.1 mouse_genomes_project 4 136141277 136200243 - MGP_CBAJ_P0067403 Ago3 protein_coding unknown_likely_coding MGP_CBAJ_T0067404.1 MGP_CBAJ_G0028442.1 mouse_genomes_project 4 136164215 136170594 - Ago3 protein_coding processed_transcript MGP_CBAJ_T0067405.1 MGP_CBAJ_G0028442.1 mouse_genomes_project 4 136173954 136200498 - Ago3 protein_coding processed_transcript MGP_CBAJ_T0014611.1 MGP_CBAJ_G0012723.1 mouse_genomes_project 4 162419986 162420807 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067277.1 MGP_CBAJ_G0028413.1 mouse_genomes_project 4 134366319 134377407 + MGP_CBAJ_P0067277 Fhl3 protein_coding protein_coding MGP_CBAJ_T0067278.1 MGP_CBAJ_G0028413.1 mouse_genomes_project 4 134366337 134377286 + MGP_CBAJ_P0067278 Fhl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066914.1 MGP_CBAJ_G0028318.1 mouse_genomes_project 4 126785198 126793329 + MGP_CBAJ_P0066914 Slc6a9 protein_coding protein_coding MGP_CBAJ_T0066915.1 MGP_CBAJ_G0028318.1 mouse_genomes_project 4 126785536 126825818 + MGP_CBAJ_P0066915 Slc6a9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066916.1 MGP_CBAJ_G0028318.1 mouse_genomes_project 4 126785570 126819873 + MGP_CBAJ_P0066916 Slc6a9 protein_coding protein_coding MGP_CBAJ_T0066917.1 MGP_CBAJ_G0028318.1 mouse_genomes_project 4 126785641 126807760 + Slc6a9 protein_coding processed_transcript MGP_CBAJ_T0066918.1 MGP_CBAJ_G0028318.1 mouse_genomes_project 4 126799415 126814591 + MGP_CBAJ_P0066918 Slc6a9 protein_coding protein_coding MGP_CBAJ_T0066919.1 MGP_CBAJ_G0028318.1 mouse_genomes_project 4 126799421 126814591 + MGP_CBAJ_P0066919 Slc6a9 protein_coding protein_coding MGP_CBAJ_T0066920.1 MGP_CBAJ_G0028318.1 mouse_genomes_project 4 126799592 126819003 + MGP_CBAJ_P0066920 Slc6a9 protein_coding protein_coding MGP_CBAJ_T0066921.1 MGP_CBAJ_G0028318.1 mouse_genomes_project 4 126806072 126808016 + MGP_CBAJ_P0066921 Slc6a9 protein_coding protein_coding MGP_CBAJ_T0066922.1 MGP_CBAJ_G0028318.1 mouse_genomes_project 4 126806124 126806608 + Slc6a9 protein_coding processed_transcript MGP_CBAJ_T0066934.1 MGP_CBAJ_G0028318.1 mouse_genomes_project 4 126824707 126825820 + Slc6a9 protein_coding retained_intron MGP_CBAJ_T0014400.1 MGP_CBAJ_G0012512.1 mouse_genomes_project 4 77255124 77262243 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014601.1 MGP_CBAJ_G0012713.1 mouse_genomes_project 4 156200797 156204151 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0067177.1 MGP_CBAJ_G0028385.1 mouse_genomes_project 4 130410731 130463869 - MGP_CBAJ_P0067177 Zmpste24 protein_coding protein_coding MGP_CBAJ_T0067178.1 MGP_CBAJ_G0028385.1 mouse_genomes_project 4 130425960 130443380 - Zmpste24 protein_coding processed_transcript MGP_CBAJ_T0067179.1 MGP_CBAJ_G0028385.1 mouse_genomes_project 4 130448584 130461326 - MGP_CBAJ_P0067179 Zmpste24 protein_coding protein_coding MGP_CBAJ_T0101920.1 MGP_CBAJ_G0039951.1 mouse_genomes_project 4 151452849 151457460 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0065363.1 MGP_CBAJ_G0027968.1 mouse_genomes_project 4 56206560 56220669 + MGP_CBAJ_P0065363 Tal2 protein_coding protein_coding MGP_CBAJ_T0010487.1 MGP_CBAJ_G0008625.1 mouse_genomes_project 4 117459162 117459238 + Mir761 miRNA miRNA MGP_CBAJ_T0067121.1 MGP_CBAJ_G0028370.1 mouse_genomes_project 4 128929626 129079961 + Hivep3 protein_coding processed_transcript MGP_CBAJ_T0067122.1 MGP_CBAJ_G0028370.1 mouse_genomes_project 4 128929626 129019362 + Hivep3 protein_coding processed_transcript MGP_CBAJ_T0067123.1 MGP_CBAJ_G0028370.1 mouse_genomes_project 4 128929638 128932615 + MGP_CBAJ_P0067123 Hivep3 protein_coding protein_coding MGP_CBAJ_T0067124.1 MGP_CBAJ_G0028370.1 mouse_genomes_project 4 128929683 129078855 + Hivep3 protein_coding processed_transcript MGP_CBAJ_T0067125.1 MGP_CBAJ_G0028370.1 mouse_genomes_project 4 128957022 129079324 + Hivep3 protein_coding processed_transcript MGP_CBAJ_T0067126.1 MGP_CBAJ_G0028370.1 mouse_genomes_project 4 129018944 129220936 + Hivep3 protein_coding processed_transcript MGP_CBAJ_T0067127.1 MGP_CBAJ_G0028370.1 mouse_genomes_project 4 129018968 129079961 + Hivep3 protein_coding processed_transcript MGP_CBAJ_T0067128.1 MGP_CBAJ_G0028370.1 mouse_genomes_project 4 129019108 129364820 + MGP_CBAJ_P0067128 Hivep3 protein_coding protein_coding MGP_CBAJ_T0067129.1 MGP_CBAJ_G0028370.1 mouse_genomes_project 4 129322581 129359293 + MGP_CBAJ_P0067129 Hivep3 protein_coding protein_coding MGP_CBAJ_T0014205.1 MGP_CBAJ_G0012317.1 mouse_genomes_project 4 3838645 3839113 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0064656.1 MGP_CBAJ_G0027816.1 mouse_genomes_project 4 41392853 41394499 + Dnaja1 protein_coding processed_transcript MGP_CBAJ_T0064657.1 MGP_CBAJ_G0027816.1 mouse_genomes_project 4 41393183 41406063 + MGP_CBAJ_P0064657 Dnaja1 protein_coding protein_coding MGP_CBAJ_T0064658.1 MGP_CBAJ_G0027816.1 mouse_genomes_project 4 41393262 41400891 + Dnaja1 protein_coding processed_transcript MGP_CBAJ_T0064659.1 MGP_CBAJ_G0027816.1 mouse_genomes_project 4 41393625 41404999 + Dnaja1 protein_coding processed_transcript MGP_CBAJ_T0064660.1 MGP_CBAJ_G0027816.1 mouse_genomes_project 4 41393625 41408248 + MGP_CBAJ_P0064660 Dnaja1 protein_coding protein_coding MGP_CBAJ_T0064661.1 MGP_CBAJ_G0027816.1 mouse_genomes_project 4 41393633 41402457 + MGP_CBAJ_P0064661 Dnaja1 protein_coding protein_coding MGP_CBAJ_T0064662.1 MGP_CBAJ_G0027816.1 mouse_genomes_project 4 41393648 41398862 + MGP_CBAJ_P0064662 Dnaja1 protein_coding protein_coding MGP_CBAJ_T0064663.1 MGP_CBAJ_G0027816.1 mouse_genomes_project 4 41393820 41396884 + MGP_CBAJ_P0064663 Dnaja1 protein_coding protein_coding MGP_CBAJ_T0064664.1 MGP_CBAJ_G0027816.1 mouse_genomes_project 4 41394065 41394815 + Dnaja1 protein_coding processed_transcript MGP_CBAJ_T0064665.1 MGP_CBAJ_G0027816.1 mouse_genomes_project 4 41394752 41402961 + Dnaja1 protein_coding processed_transcript MGP_CBAJ_T0017781.1 MGP_CBAJ_G0015281.1 mouse_genomes_project 4 32749661 32753847 - 4933421O10Rik processed_transcript processed_transcript MGP_CBAJ_T0014591.1 MGP_CBAJ_G0012703.1 mouse_genomes_project 4 148075124 148075613 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065004.1 MGP_CBAJ_G0027881.1 mouse_genomes_project 4 44651878 44671293 + MGP_CBAJ_P0065004 Npr2 protein_coding protein_coding MGP_CBAJ_T0065005.1 MGP_CBAJ_G0027881.1 mouse_genomes_project 4 44652128 44671293 + MGP_CBAJ_P0065005 Npr2 protein_coding protein_coding MGP_CBAJ_T0065006.1 MGP_CBAJ_G0027881.1 mouse_genomes_project 4 44661161 44671293 + Npr2 protein_coding processed_transcript MGP_CBAJ_T0065007.1 MGP_CBAJ_G0027881.1 mouse_genomes_project 4 44661300 44663142 + Npr2 protein_coding processed_transcript MGP_CBAJ_T0065008.1 MGP_CBAJ_G0027881.1 mouse_genomes_project 4 44661307 44664423 + MGP_CBAJ_P0065008 Npr2 protein_coding protein_coding MGP_CBAJ_T0065009.1 MGP_CBAJ_G0027881.1 mouse_genomes_project 4 44661329 44671293 + MGP_CBAJ_P0065009 Npr2 protein_coding protein_coding MGP_CBAJ_T0065010.1 MGP_CBAJ_G0027881.1 mouse_genomes_project 4 44664179 44668222 + Npr2 protein_coding processed_transcript MGP_CBAJ_T0065011.1 MGP_CBAJ_G0027881.1 mouse_genomes_project 4 44666603 44670358 + Npr2 protein_coding processed_transcript MGP_CBAJ_T0065012.1 MGP_CBAJ_G0027881.1 mouse_genomes_project 4 44667240 44668449 + Npr2 protein_coding processed_transcript MGP_CBAJ_T0065013.1 MGP_CBAJ_G0027881.1 mouse_genomes_project 4 44668048 44670279 + Npr2 protein_coding processed_transcript MGP_CBAJ_T0010464.1 MGP_CBAJ_G0008602.1 mouse_genomes_project 4 45789714 45789792 - Mir5120 miRNA miRNA MGP_CBAJ_T0011443.1 MGP_CBAJ_G0009581.1 mouse_genomes_project 4 83690513 83690599 + Gm22262 misc_RNA misc_RNA MGP_CBAJ_T0064818.1 MGP_CBAJ_G0027854.1 mouse_genomes_project 4 42627932 42628741 - MGP_CBAJ_P0064818 protein_coding protein_coding MGP_CBAJ_T0014392.1 MGP_CBAJ_G0012504.1 mouse_genomes_project 4 73937627 73938738 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099241.1 MGP_CBAJ_G0037496.1 mouse_genomes_project 4 15492727 15492830 - Gm23384 snRNA snRNA MGP_CBAJ_T0066053.1 MGP_CBAJ_G0028141.1 mouse_genomes_project 4 106162050 106169110 + MGP_CBAJ_P0066053 Angptl3 protein_coding protein_coding MGP_CBAJ_T0066054.1 MGP_CBAJ_G0028141.1 mouse_genomes_project 4 106164275 106169004 + Angptl3 protein_coding processed_transcript MGP_CBAJ_T0066055.1 MGP_CBAJ_G0028141.1 mouse_genomes_project 4 106164299 106177156 + Angptl3 protein_coding processed_transcript MGP_CBAJ_T0004374.1 MGP_CBAJ_G0003809.1 mouse_genomes_project 4 59950250 59954734 + Gm12530 antisense antisense MGP_CBAJ_T0067054.1 MGP_CBAJ_G0028356.1 mouse_genomes_project 4 128337166 128373304 - AU022252 protein_coding processed_transcript MGP_CBAJ_T0067056.1 MGP_CBAJ_G0028356.1 mouse_genomes_project 4 128355914 128373308 - MGP_CBAJ_P0067056 AU022252 protein_coding protein_coding MGP_CBAJ_T0067057.1 MGP_CBAJ_G0028356.1 mouse_genomes_project 4 128364367 128373274 - AU022252 protein_coding processed_transcript MGP_CBAJ_T0067058.1 MGP_CBAJ_G0028356.1 mouse_genomes_project 4 128364457 128373281 - AU022252 protein_coding processed_transcript MGP_CBAJ_T0001393.1 MGP_CBAJ_G0001317.1 mouse_genomes_project 4 164233827 164238971 + TEC TEC MGP_CBAJ_T0004353.1 MGP_CBAJ_G0003791.1 mouse_genomes_project 4 40897821 40899181 + antisense antisense MGP_CBAJ_T0068564.1 MGP_CBAJ_G0028698.1 mouse_genomes_project 4 153412549 153430057 - Necap2 protein_coding processed_transcript MGP_CBAJ_T0068565.1 MGP_CBAJ_G0028698.1 mouse_genomes_project 4 153412549 153430072 - MGP_CBAJ_P0068565 Necap2 protein_coding protein_coding MGP_CBAJ_T0068566.1 MGP_CBAJ_G0028698.1 mouse_genomes_project 4 153413384 153425328 - Necap2 protein_coding retained_intron MGP_CBAJ_T0068567.1 MGP_CBAJ_G0028698.1 mouse_genomes_project 4 153413432 153414876 - Necap2 protein_coding retained_intron MGP_CBAJ_T0068568.1 MGP_CBAJ_G0028698.1 mouse_genomes_project 4 153413553 153417877 - Necap2 protein_coding retained_intron MGP_CBAJ_T0068569.1 MGP_CBAJ_G0028698.1 mouse_genomes_project 4 153413600 153419743 - MGP_CBAJ_P0068569 Necap2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068570.1 MGP_CBAJ_G0028698.1 mouse_genomes_project 4 153414246 153430072 - Necap2 protein_coding processed_transcript MGP_CBAJ_T0068571.1 MGP_CBAJ_G0028698.1 mouse_genomes_project 4 153416119 153430072 - Necap2 protein_coding processed_transcript MGP_CBAJ_T0068572.1 MGP_CBAJ_G0028698.1 mouse_genomes_project 4 153416189 153417811 - Necap2 protein_coding retained_intron MGP_CBAJ_T0068573.1 MGP_CBAJ_G0028698.1 mouse_genomes_project 4 153416217 153430009 - Necap2 protein_coding retained_intron MGP_CBAJ_T0068574.1 MGP_CBAJ_G0028698.1 mouse_genomes_project 4 153418366 153430072 - Necap2 protein_coding retained_intron MGP_CBAJ_T0007881.1 MGP_CBAJ_G0006428.1 mouse_genomes_project 4 142823613 142823771 + Gm28872 lincRNA lincRNA MGP_CBAJ_T0067617.1 MGP_CBAJ_G0028491.1 mouse_genomes_project 4 139845995 139846638 - Fam167b protein_coding processed_transcript MGP_CBAJ_T0067618.1 MGP_CBAJ_G0028491.1 mouse_genomes_project 4 139845995 139847730 - MGP_CBAJ_P0067618 Fam167b protein_coding protein_coding MGP_CBAJ_T0001396.1 MGP_CBAJ_G0001320.1 mouse_genomes_project 4 171112326 171116440 - TEC TEC MGP_CBAJ_T0010462.1 MGP_CBAJ_G0008600.1 mouse_genomes_project 4 44651368 44651501 + Gm25262 miRNA miRNA MGP_CBAJ_T0099287.1 MGP_CBAJ_G0037542.1 mouse_genomes_project 4 116928630 116928737 - Gm22345 snRNA snRNA MGP_CBAJ_T0067027.1 MGP_CBAJ_G0028346.1 mouse_genomes_project 4 127918420 127936858 + MGP_CBAJ_P0067027 Olfr1331 protein_coding protein_coding MGP_CBAJ_T0014420.1 MGP_CBAJ_G0012532.1 mouse_genomes_project 4 83719259 83720536 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0069396.1 MGP_CBAJ_G0028887.1 mouse_genomes_project 4 170739541 170778877 + MGP_CBAJ_P0069396 Ssu72 protein_coding protein_coding MGP_CBAJ_T0069397.1 MGP_CBAJ_G0028887.1 mouse_genomes_project 4 170739865 170756434 + Ssu72 protein_coding retained_intron MGP_CBAJ_T0069398.1 MGP_CBAJ_G0028887.1 mouse_genomes_project 4 170739876 170777194 + MGP_CBAJ_P0069398 Ssu72 protein_coding protein_coding MGP_CBAJ_T0004491.1 MGP_CBAJ_G0003898.1 mouse_genomes_project 4 154566780 154570594 + Fhad1os1 antisense antisense MGP_CBAJ_T0068817.1 MGP_CBAJ_G0028784.1 mouse_genomes_project 4 161914182 161928981 - MGP_CBAJ_P0068817 Fbxo44 protein_coding protein_coding MGP_CBAJ_T0068818.1 MGP_CBAJ_G0028784.1 mouse_genomes_project 4 161914185 161929481 - MGP_CBAJ_P0068818 Fbxo44 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068819.1 MGP_CBAJ_G0028784.1 mouse_genomes_project 4 161914185 161929470 - MGP_CBAJ_P0068819 Fbxo44 protein_coding protein_coding MGP_CBAJ_T0068820.1 MGP_CBAJ_G0028784.1 mouse_genomes_project 4 161914649 161929263 - MGP_CBAJ_P0068820 Fbxo44 protein_coding protein_coding MGP_CBAJ_T0068821.1 MGP_CBAJ_G0028784.1 mouse_genomes_project 4 161914919 161924197 - MGP_CBAJ_P0068821 Fbxo44 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068822.1 MGP_CBAJ_G0028784.1 mouse_genomes_project 4 161914954 161929261 - MGP_CBAJ_P0068822 Fbxo44 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068823.1 MGP_CBAJ_G0028784.1 mouse_genomes_project 4 161914954 161929036 - MGP_CBAJ_P0068823 Fbxo44 protein_coding protein_coding MGP_CBAJ_T0068824.1 MGP_CBAJ_G0028784.1 mouse_genomes_project 4 161916887 161929237 - MGP_CBAJ_P0068824 Fbxo44 protein_coding protein_coding MGP_CBAJ_T0068825.1 MGP_CBAJ_G0028784.1 mouse_genomes_project 4 161917537 161929235 - MGP_CBAJ_P0068825 Fbxo44 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068826.1 MGP_CBAJ_G0028784.1 mouse_genomes_project 4 161917557 161929869 - MGP_CBAJ_P0068826 Fbxo44 protein_coding protein_coding MGP_CBAJ_T0066789.1 MGP_CBAJ_G0028295.1 mouse_genomes_project 4 125479862 125488241 - MGP_CBAJ_P0066789 Mmachc protein_coding protein_coding MGP_CBAJ_T0066790.1 MGP_CBAJ_G0028295.1 mouse_genomes_project 4 125481972 125488123 - Mmachc protein_coding processed_transcript MGP_CBAJ_T0007813.1 MGP_CBAJ_G0006381.1 mouse_genomes_project 4 114108339 114128591 - Gm12729 lincRNA lincRNA MGP_CBAJ_T0014318.1 MGP_CBAJ_G0012430.1 mouse_genomes_project 4 39780283 39781043 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004355.1 MGP_CBAJ_G0003793.1 mouse_genomes_project 4 42458457 42460506 + Gm12406 antisense antisense MGP_CBAJ_T0067528.1 MGP_CBAJ_G0028473.1 mouse_genomes_project 4 139185904 139213834 + MGP_CBAJ_P0067528 Rnf19b protein_coding protein_coding MGP_CBAJ_T0067529.1 MGP_CBAJ_G0028473.1 mouse_genomes_project 4 139185904 139215043 + MGP_CBAJ_P0067529 Rnf19b protein_coding protein_coding MGP_CBAJ_T0067530.1 MGP_CBAJ_G0028473.1 mouse_genomes_project 4 139186042 139209857 + MGP_CBAJ_P0067530 Rnf19b protein_coding protein_coding MGP_CBAJ_T0067531.1 MGP_CBAJ_G0028473.1 mouse_genomes_project 4 139186447 139213834 + MGP_CBAJ_P0067531 Rnf19b protein_coding protein_coding MGP_CBAJ_T0067532.1 MGP_CBAJ_G0028473.1 mouse_genomes_project 4 139208278 139215194 + MGP_CBAJ_P0067532 Rnf19b protein_coding protein_coding MGP_CBAJ_T0067533.1 MGP_CBAJ_G0028473.1 mouse_genomes_project 4 139213192 139215194 + Rnf19b protein_coding processed_transcript MGP_CBAJ_T0066122.1 MGP_CBAJ_G0028159.1 mouse_genomes_project 4 109355981 109375096 - MGP_CBAJ_P0066122 protein_coding protein_coding MGP_CBAJ_T0067314.1 MGP_CBAJ_G0028422.1 mouse_genomes_project 4 134704859 134730223 + MGP_CBAJ_P0067314 Rspo1 protein_coding protein_coding MGP_CBAJ_T0067315.1 MGP_CBAJ_G0028422.1 mouse_genomes_project 4 134728603 134729649 + Rspo1 protein_coding processed_transcript MGP_CBAJ_T0014405.1 MGP_CBAJ_G0012517.1 mouse_genomes_project 4 79188576 79189794 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014292.1 MGP_CBAJ_G0012404.1 mouse_genomes_project 4 30938887 30939362 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014310.1 MGP_CBAJ_G0012422.1 mouse_genomes_project 4 35430766 35431334 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0068532.1 MGP_CBAJ_G0028690.1 mouse_genomes_project 4 153008498 153053399 - MGP_CBAJ_P0068532 Padi4 protein_coding protein_coding MGP_CBAJ_T0068533.1 MGP_CBAJ_G0028690.1 mouse_genomes_project 4 153018221 153023971 - Padi4 protein_coding processed_transcript MGP_CBAJ_T0068534.1 MGP_CBAJ_G0028690.1 mouse_genomes_project 4 153021948 153027849 - Padi4 protein_coding processed_transcript MGP_CBAJ_T0068535.1 MGP_CBAJ_G0028690.1 mouse_genomes_project 4 153024139 153027842 - Padi4 protein_coding processed_transcript MGP_CBAJ_T0007902.1 MGP_CBAJ_G0006440.1 mouse_genomes_project 4 150085971 150086447 + 2310026L22Rik lincRNA lincRNA MGP_CBAJ_T0065730.1 MGP_CBAJ_G0028065.1 mouse_genomes_project 4 88380682 88384080 - MGP_CBAJ_P0065730 Cer1 protein_coding protein_coding MGP_CBAJ_T0067497.1 MGP_CBAJ_G0028467.1 mouse_genomes_project 4 138717613 138827382 + MGP_CBAJ_P0067497 Phc2 protein_coding protein_coding MGP_CBAJ_T0067498.1 MGP_CBAJ_G0028467.1 mouse_genomes_project 4 138717649 138781178 + MGP_CBAJ_P0067498 Phc2 protein_coding protein_coding MGP_CBAJ_T0067499.1 MGP_CBAJ_G0028467.1 mouse_genomes_project 4 138755027 138774647 + Phc2 protein_coding retained_intron MGP_CBAJ_T0067500.1 MGP_CBAJ_G0028467.1 mouse_genomes_project 4 138755084 138827382 + MGP_CBAJ_P0067500 Phc2 protein_coding protein_coding MGP_CBAJ_T0067501.1 MGP_CBAJ_G0028467.1 mouse_genomes_project 4 138779147 138796334 + Phc2 protein_coding retained_intron MGP_CBAJ_T0067502.1 MGP_CBAJ_G0028467.1 mouse_genomes_project 4 138799534 138827382 + MGP_CBAJ_P0067502 Phc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067503.1 MGP_CBAJ_G0028467.1 mouse_genomes_project 4 138799538 138827382 + MGP_CBAJ_P0067503 Phc2 protein_coding protein_coding MGP_CBAJ_T0067504.1 MGP_CBAJ_G0028467.1 mouse_genomes_project 4 138799635 138822722 + MGP_CBAJ_P0067504 Phc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0067505.1 MGP_CBAJ_G0028467.1 mouse_genomes_project 4 138799663 138819519 + MGP_CBAJ_P0067505 Phc2 protein_coding protein_coding MGP_CBAJ_T0067506.1 MGP_CBAJ_G0028467.1 mouse_genomes_project 4 138799886 138822579 + MGP_CBAJ_P0067506 Phc2 protein_coding protein_coding MGP_CBAJ_T0067507.1 MGP_CBAJ_G0028467.1 mouse_genomes_project 4 138799924 138817982 + MGP_CBAJ_P0067507 Phc2 protein_coding protein_coding MGP_CBAJ_T0067508.1 MGP_CBAJ_G0028467.1 mouse_genomes_project 4 138799935 138821637 + MGP_CBAJ_P0067508 Phc2 protein_coding protein_coding MGP_CBAJ_T0069448.1 MGP_CBAJ_G0028898.1 mouse_genomes_project 4 170921515 170925596 - MGP_CBAJ_P0069448 Tas1r3 protein_coding protein_coding MGP_CBAJ_T0068119.1 MGP_CBAJ_G0028591.1 mouse_genomes_project 4 145547791 145568626 + MGP_CBAJ_P0068119 Aunip protein_coding protein_coding MGP_CBAJ_T0017819.1 MGP_CBAJ_G0015309.1 mouse_genomes_project 4 118153137 118159419 - 9630013D21Rik processed_transcript processed_transcript MGP_CBAJ_T0017820.1 MGP_CBAJ_G0015309.1 mouse_genomes_project 4 118154079 118159445 - 9630013D21Rik processed_transcript processed_transcript MGP_CBAJ_T0017821.1 MGP_CBAJ_G0015309.1 mouse_genomes_project 4 118154206 118155723 - 9630013D21Rik processed_transcript processed_transcript MGP_CBAJ_T0017822.1 MGP_CBAJ_G0015309.1 mouse_genomes_project 4 118154544 118159200 - 9630013D21Rik processed_transcript processed_transcript MGP_CBAJ_T0014534.1 MGP_CBAJ_G0012646.1 mouse_genomes_project 4 127836913 127837408 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0066614.1 MGP_CBAJ_G0028254.1 mouse_genomes_project 4 123246697 123249277 - MGP_CBAJ_P0066614 Foxd2 protein_coding protein_coding MGP_CBAJ_T0068846.1 MGP_CBAJ_G0028791.1 mouse_genomes_project 4 162453287 162456685 + MGP_CBAJ_P0068846 Srm protein_coding unknown_likely_coding MGP_CBAJ_T0068847.1 MGP_CBAJ_G0028791.1 mouse_genomes_project 4 162453585 162455874 + Srm protein_coding retained_intron MGP_CBAJ_T0068848.1 MGP_CBAJ_G0028791.1 mouse_genomes_project 4 162455568 162456668 + Srm protein_coding processed_transcript MGP_CBAJ_T0066603.1 MGP_CBAJ_G0028249.1 mouse_genomes_project 4 120867378 120882632 + MGP_CBAJ_P0066603 Skint2 protein_coding protein_coding MGP_CBAJ_T0066604.1 MGP_CBAJ_G0028249.1 mouse_genomes_project 4 120867521 120910180 + MGP_CBAJ_P0066604 Skint2 protein_coding protein_coding MGP_CBAJ_T0066605.1 MGP_CBAJ_G0028249.1 mouse_genomes_project 4 120867532 120905710 + Skint2 protein_coding processed_transcript MGP_CBAJ_T0066606.1 MGP_CBAJ_G0028249.1 mouse_genomes_project 4 120871098 120905710 + MGP_CBAJ_P0066606 Skint2 protein_coding protein_coding MGP_CBAJ_T0014389.1 MGP_CBAJ_G0012501.1 mouse_genomes_project 4 72150153 72152198 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0065274.1 MGP_CBAJ_G0027940.1 mouse_genomes_project 4 50116011 50157674 - MGP_CBAJ_P0065274 Tex10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0065275.1 MGP_CBAJ_G0027940.1 mouse_genomes_project 4 50116011 50162210 - MGP_CBAJ_P0065275 Tex10 protein_coding protein_coding MGP_CBAJ_T0065276.1 MGP_CBAJ_G0027940.1 mouse_genomes_project 4 50116109 50162173 - MGP_CBAJ_P0065276 Tex10 protein_coding protein_coding MGP_CBAJ_T0065277.1 MGP_CBAJ_G0027940.1 mouse_genomes_project 4 50144615 50145750 - Tex10 protein_coding retained_intron MGP_CBAJ_T0065278.1 MGP_CBAJ_G0027940.1 mouse_genomes_project 4 50156456 50158746 - Tex10 protein_coding processed_transcript MGP_CBAJ_T0065279.1 MGP_CBAJ_G0027940.1 mouse_genomes_project 4 50157958 50162094 - Tex10 protein_coding retained_intron MGP_CBAJ_T0099262.1 MGP_CBAJ_G0037517.1 mouse_genomes_project 4 60594874 60594978 + Gm24277 snRNA snRNA MGP_CBAJ_T0099274.1 MGP_CBAJ_G0037529.1 mouse_genomes_project 4 100213165 100213272 + Gm24796 snRNA snRNA MGP_CBAJ_T0014416.1 MGP_CBAJ_G0012528.1 mouse_genomes_project 4 81515291 81515528 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007779.1 MGP_CBAJ_G0006353.1 mouse_genomes_project 4 89444445 89448566 - Gm11415 lincRNA lincRNA MGP_CBAJ_T0017800.1 MGP_CBAJ_G0015293.1 mouse_genomes_project 4 76366114 76380150 + C630043F03Rik processed_transcript processed_transcript MGP_CBAJ_T0004448.1 MGP_CBAJ_G0003863.1 mouse_genomes_project 4 134594167 134598060 - 1700125G02Rik antisense antisense MGP_CBAJ_T0100581.1 MGP_CBAJ_G0038836.1 mouse_genomes_project 4 141092293 141092376 + Gm24091 snoRNA snoRNA MGP_CBAJ_T0014422.1 MGP_CBAJ_G0012534.1 mouse_genomes_project 4 85221124 85222182 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014494.1 MGP_CBAJ_G0012606.1 mouse_genomes_project 4 115458001 115458437 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014366.1 MGP_CBAJ_G0012478.1 mouse_genomes_project 4 57700719 57701328 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004427.1 MGP_CBAJ_G0003846.1 mouse_genomes_project 4 125631868 125637509 + Gm12996 antisense antisense MGP_CBAJ_T0011444.1 MGP_CBAJ_G0009582.1 mouse_genomes_project 4 91671558 91671835 + Gm26069 misc_RNA misc_RNA MGP_CBAJ_T0099254.1 MGP_CBAJ_G0037509.1 mouse_genomes_project 4 41941701 41941804 - Gm24650 snRNA snRNA MGP_CBAJ_T0010526.1 MGP_CBAJ_G0008664.1 mouse_genomes_project 4 161904123 161904184 - Mir7022 miRNA miRNA MGP_CBAJ_T0099246.1 MGP_CBAJ_G0037501.1 mouse_genomes_project 4 30723477 30723581 - Gm25705 snRNA snRNA MGP_CBAJ_T0099299.1 MGP_CBAJ_G0037554.1 mouse_genomes_project 4 133993538 133993642 - Gm22983 snRNA snRNA MGP_CBAJ_T0017818.1 MGP_CBAJ_G0015308.1 mouse_genomes_project 4 118074247 118158383 + Gm12811 processed_transcript processed_transcript MGP_CBAJ_T0010466.1 MGP_CBAJ_G0008604.1 mouse_genomes_project 4 46684066 46684179 - Gm25692 miRNA miRNA MGP_CBAJ_T0007859.1 MGP_CBAJ_G0006413.1 mouse_genomes_project 4 139177726 139185617 - 1700086P04Rik lincRNA lincRNA MGP_CBAJ_T0098390.1 MGP_CBAJ_G0036656.1 mouse_genomes_project 4 141084529 141088342 + Gm12971 sense_intronic sense_intronic MGP_CBAJ_T0067766.1 MGP_CBAJ_G0028517.1 mouse_genomes_project 4 141272826 141304341 + MGP_CBAJ_P0067766 Laptm5 protein_coding protein_coding MGP_CBAJ_T0067767.1 MGP_CBAJ_G0028517.1 mouse_genomes_project 4 141273007 141291553 + MGP_CBAJ_P0067767 Laptm5 protein_coding protein_coding MGP_CBAJ_T0067768.1 MGP_CBAJ_G0028517.1 mouse_genomes_project 4 141273013 141287930 + Laptm5 protein_coding processed_transcript MGP_CBAJ_T0067769.1 MGP_CBAJ_G0028517.1 mouse_genomes_project 4 141273019 141291556 + Laptm5 protein_coding processed_transcript MGP_CBAJ_T0067770.1 MGP_CBAJ_G0028517.1 mouse_genomes_project 4 141273020 141289229 + Laptm5 protein_coding processed_transcript MGP_CBAJ_T0067771.1 MGP_CBAJ_G0028517.1 mouse_genomes_project 4 141273057 141299135 + MGP_CBAJ_P0067771 Laptm5 protein_coding protein_coding MGP_CBAJ_T0067772.1 MGP_CBAJ_G0028517.1 mouse_genomes_project 4 141275167 141291574 + Laptm5 protein_coding processed_transcript MGP_CBAJ_T0067773.1 MGP_CBAJ_G0028517.1 mouse_genomes_project 4 141275365 141289716 + Laptm5 protein_coding processed_transcript MGP_CBAJ_T0067774.1 MGP_CBAJ_G0028517.1 mouse_genomes_project 4 141275648 141300547 + MGP_CBAJ_P0067774 Laptm5 protein_coding protein_coding MGP_CBAJ_T0067775.1 MGP_CBAJ_G0028517.1 mouse_genomes_project 4 141294931 141299419 + Laptm5 protein_coding processed_transcript MGP_CBAJ_T0100530.1 MGP_CBAJ_G0038785.1 mouse_genomes_project 4 45581872 45581999 - Gm24376 snoRNA snoRNA MGP_CBAJ_T0014520.1 MGP_CBAJ_G0012632.1 mouse_genomes_project 4 124762223 124762520 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099285.1 MGP_CBAJ_G0037540.1 mouse_genomes_project 4 116885289 116885392 + Gm23138 snRNA snRNA MGP_CBAJ_T0098386.1 MGP_CBAJ_G0036652.1 mouse_genomes_project 4 89320733 89321214 + Gm26968 sense_intronic sense_intronic MGP_CBAJ_T0067517.1 MGP_CBAJ_G0028471.1 mouse_genomes_project 4 139032361 139075037 - MGP_CBAJ_P0067517 Azin2 protein_coding protein_coding MGP_CBAJ_T0067518.1 MGP_CBAJ_G0028471.1 mouse_genomes_project 4 139034150 139075045 - MGP_CBAJ_P0067518 Azin2 protein_coding protein_coding MGP_CBAJ_T0067519.1 MGP_CBAJ_G0028471.1 mouse_genomes_project 4 139034150 139075056 - MGP_CBAJ_P0067519 Azin2 protein_coding protein_coding MGP_CBAJ_T0067520.1 MGP_CBAJ_G0028471.1 mouse_genomes_project 4 139051989 139075056 - Azin2 protein_coding retained_intron MGP_CBAJ_T0067521.1 MGP_CBAJ_G0028471.1 mouse_genomes_project 4 139052431 139074015 - MGP_CBAJ_P0067521 Azin2 protein_coding protein_coding MGP_CBAJ_T0067522.1 MGP_CBAJ_G0028471.1 mouse_genomes_project 4 139053529 139075059 - Azin2 protein_coding retained_intron MGP_CBAJ_T0067523.1 MGP_CBAJ_G0028471.1 mouse_genomes_project 4 139073321 139075045 - Azin2 protein_coding retained_intron MGP_CBAJ_T0100511.1 MGP_CBAJ_G0038766.1 mouse_genomes_project 4 2328982 2329108 - Gm24337 snoRNA snoRNA MGP_CBAJ_T0011447.1 MGP_CBAJ_G0009585.1 mouse_genomes_project 4 105274878 105274992 + Gm24203 misc_RNA misc_RNA MGP_CBAJ_T0068720.1 MGP_CBAJ_G0028746.1 mouse_genomes_project 4 157416623 157419840 + MGP_CBAJ_P0068720 protein_coding protein_coding MGP_CBAJ_T0004429.1 MGP_CBAJ_G0003848.1 mouse_genomes_project 4 126191106 126193015 + Gm12843 antisense antisense MGP_CBAJ_T0004430.1 MGP_CBAJ_G0003848.1 mouse_genomes_project 4 126191433 126192663 + Gm12843 antisense antisense MGP_CBAJ_T0004447.1 MGP_CBAJ_G0003862.1 mouse_genomes_project 4 134193889 134322076 - Gm27247 antisense antisense MGP_CBAJ_T0007831.1 MGP_CBAJ_G0006394.1 mouse_genomes_project 4 126416877 126421033 + Gm12827 lincRNA lincRNA MGP_CBAJ_T0068982.1 MGP_CBAJ_G0028813.1 mouse_genomes_project 4 164262453 164280793 + MGP_CBAJ_P0068982 Gpr157 protein_coding protein_coding MGP_CBAJ_T0065026.1 MGP_CBAJ_G0027885.1 mouse_genomes_project 4 44692182 44709104 + protein_coding processed_transcript MGP_CBAJ_T0065027.1 MGP_CBAJ_G0027885.1 mouse_genomes_project 4 44692246 44713052 + MGP_CBAJ_P0065027 protein_coding protein_coding MGP_CBAJ_T0065028.1 MGP_CBAJ_G0027885.1 mouse_genomes_project 4 44692480 44708307 + MGP_CBAJ_P0065028 protein_coding protein_coding MGP_CBAJ_T0065029.1 MGP_CBAJ_G0027885.1 mouse_genomes_project 4 44692541 44703999 + protein_coding processed_transcript MGP_CBAJ_T0065030.1 MGP_CBAJ_G0027885.1 mouse_genomes_project 4 44697146 44708896 + protein_coding processed_transcript MGP_CBAJ_T0065031.1 MGP_CBAJ_G0027885.1 mouse_genomes_project 4 44712379 44713186 + protein_coding processed_transcript MGP_CBAJ_T0067151.1 MGP_CBAJ_G0028377.1 mouse_genomes_project 4 129970643 129971892 + MGP_CBAJ_P0067151 Cited4 protein_coding protein_coding MGP_CBAJ_T0014315.1 MGP_CBAJ_G0012427.1 mouse_genomes_project 4 38402225 38402654 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0065332.1 MGP_CBAJ_G0027958.1 mouse_genomes_project 4 55162366 55163326 + MGP_CBAJ_P0065332 Olfr275 protein_coding protein_coding MGP_CBAJ_T0066711.1 MGP_CBAJ_G0028280.1 mouse_genomes_project 4 124773047 124797453 + MGP_CBAJ_P0066711 Lrrc41 protein_coding protein_coding MGP_CBAJ_T0066712.1 MGP_CBAJ_G0028280.1 mouse_genomes_project 4 124773241 124783470 + Lrrc41 protein_coding processed_transcript MGP_CBAJ_T0066713.1 MGP_CBAJ_G0028280.1 mouse_genomes_project 4 124773323 124788939 + Lrrc41 protein_coding processed_transcript MGP_CBAJ_T0066714.1 MGP_CBAJ_G0028280.1 mouse_genomes_project 4 124774663 124789008 + Lrrc41 protein_coding processed_transcript MGP_CBAJ_T0066715.1 MGP_CBAJ_G0028280.1 mouse_genomes_project 4 124777175 124783468 + Lrrc41 protein_coding processed_transcript MGP_CBAJ_T0066716.1 MGP_CBAJ_G0028280.1 mouse_genomes_project 4 124789891 124793719 + Lrrc41 protein_coding processed_transcript MGP_CBAJ_T0064685.1 MGP_CBAJ_G0027823.1 mouse_genomes_project 4 41755606 41777799 - MGP_CBAJ_P0064685 Aqp7 protein_coding protein_coding MGP_CBAJ_T0064686.1 MGP_CBAJ_G0027823.1 mouse_genomes_project 4 41755606 41780490 - MGP_CBAJ_P0064686 Aqp7 protein_coding protein_coding MGP_CBAJ_T0064687.1 MGP_CBAJ_G0027823.1 mouse_genomes_project 4 41760525 41773551 - Aqp7 protein_coding processed_transcript MGP_CBAJ_T0064688.1 MGP_CBAJ_G0027823.1 mouse_genomes_project 4 41760767 41761943 - Aqp7 protein_coding processed_transcript MGP_CBAJ_T0068302.1 MGP_CBAJ_G0028634.1 mouse_genomes_project 4 148153547 148378738 - MGP_CBAJ_P0068302 Ephb2 protein_coding protein_coding MGP_CBAJ_T0068303.1 MGP_CBAJ_G0028634.1 mouse_genomes_project 4 148159612 148378706 - MGP_CBAJ_P0068303 Ephb2 protein_coding protein_coding MGP_CBAJ_T0068304.1 MGP_CBAJ_G0028634.1 mouse_genomes_project 4 148160639 148378593 - MGP_CBAJ_P0068304 Ephb2 protein_coding protein_coding MGP_CBAJ_T0068305.1 MGP_CBAJ_G0028634.1 mouse_genomes_project 4 148165684 148167834 - Ephb2 protein_coding retained_intron MGP_CBAJ_T0068306.1 MGP_CBAJ_G0028634.1 mouse_genomes_project 4 148167644 148215940 - MGP_CBAJ_P0068306 Ephb2 protein_coding protein_coding MGP_CBAJ_T0068307.1 MGP_CBAJ_G0028634.1 mouse_genomes_project 4 148309044 148378724 - Ephb2 protein_coding retained_intron MGP_CBAJ_T0064646.1 MGP_CBAJ_G0027813.1 mouse_genomes_project 4 40898831 40907501 - MGP_CBAJ_P0064646 Ndufb6 protein_coding protein_coding MGP_CBAJ_T0064647.1 MGP_CBAJ_G0027813.1 mouse_genomes_project 4 40898905 40907489 - MGP_CBAJ_P0064647 Ndufb6 protein_coding protein_coding MGP_CBAJ_T0007724.1 MGP_CBAJ_G0006307.1 mouse_genomes_project 4 37498759 37590687 + Gm12374 lincRNA lincRNA MGP_CBAJ_T0068902.1 MGP_CBAJ_G0028800.1 mouse_genomes_project 4 163148448 163165273 - MGP_CBAJ_P0068902 Pgd protein_coding protein_coding MGP_CBAJ_T0068903.1 MGP_CBAJ_G0028800.1 mouse_genomes_project 4 163153651 163158441 - Pgd protein_coding retained_intron MGP_CBAJ_T0068904.1 MGP_CBAJ_G0028800.1 mouse_genomes_project 4 163158368 163165337 - Pgd protein_coding retained_intron MGP_CBAJ_T0068905.1 MGP_CBAJ_G0028800.1 mouse_genomes_project 4 163158734 163160105 - Pgd protein_coding retained_intron MGP_CBAJ_T0068906.1 MGP_CBAJ_G0028800.1 mouse_genomes_project 4 163159834 163165226 - Pgd protein_coding retained_intron MGP_CBAJ_T0068787.1 MGP_CBAJ_G0028778.1 mouse_genomes_project 4 161731094 161770222 - MGP_CBAJ_P0068787 Clcn6 protein_coding protein_coding MGP_CBAJ_T0068788.1 MGP_CBAJ_G0028778.1 mouse_genomes_project 4 161732985 161770214 - MGP_CBAJ_P0068788 Clcn6 protein_coding protein_coding MGP_CBAJ_T0068789.1 MGP_CBAJ_G0028778.1 mouse_genomes_project 4 161733440 161770171 - MGP_CBAJ_P0068789 Clcn6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068790.1 MGP_CBAJ_G0028778.1 mouse_genomes_project 4 161751287 161770164 - Clcn6 protein_coding processed_transcript MGP_CBAJ_T0068791.1 MGP_CBAJ_G0028778.1 mouse_genomes_project 4 161753255 161769963 - MGP_CBAJ_P0068791 Clcn6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0007759.1 MGP_CBAJ_G0006335.1 mouse_genomes_project 4 61031171 61063000 + Gm26889 lincRNA lincRNA MGP_CBAJ_T0064819.1 MGP_CBAJ_G0027855.1 mouse_genomes_project 4 43480382 43480989 - MGP_CBAJ_P0064819 Gm10931 protein_coding protein_coding MGP_CBAJ_T0099306.1 MGP_CBAJ_G0037561.1 mouse_genomes_project 4 142823637 142823771 - Rnu11 snRNA snRNA MGP_CBAJ_T0004357.1 MGP_CBAJ_G0003795.1 mouse_genomes_project 4 44491901 44496208 - Gm12454 antisense antisense MGP_CBAJ_T0004358.1 MGP_CBAJ_G0003795.1 mouse_genomes_project 4 44493129 44496231 - Gm12454 antisense antisense MGP_CBAJ_T0099288.1 MGP_CBAJ_G0037543.1 mouse_genomes_project 4 117435812 117435917 - Gm23589 snRNA snRNA MGP_CBAJ_T0066638.1 MGP_CBAJ_G0028260.1 mouse_genomes_project 4 123484556 123511967 - MGP_CBAJ_P0066638 Cyp4x1 protein_coding protein_coding MGP_CBAJ_T0064455.1 MGP_CBAJ_G0027769.1 mouse_genomes_project 4 20918411 20923997 - MGP_CBAJ_P0064455 Pou3f2 protein_coding protein_coding MGP_CBAJ_T0065701.1 MGP_CBAJ_G0028062.1 mouse_genomes_project 4 86623054 86793061 - MGP_CBAJ_P0065701 Mpdz protein_coding protein_coding MGP_CBAJ_T0065702.1 MGP_CBAJ_G0028062.1 mouse_genomes_project 4 86623059 86793063 - MGP_CBAJ_P0065702 Mpdz protein_coding protein_coding MGP_CBAJ_T0065703.1 MGP_CBAJ_G0028062.1 mouse_genomes_project 4 86623059 86687526 - MGP_CBAJ_P0065703 Mpdz protein_coding protein_coding MGP_CBAJ_T0065704.1 MGP_CBAJ_G0028062.1 mouse_genomes_project 4 86623070 86792952 - MGP_CBAJ_P0065704 Mpdz protein_coding unknown_likely_coding MGP_CBAJ_T0065705.1 MGP_CBAJ_G0028062.1 mouse_genomes_project 4 86623789 86631691 - Mpdz protein_coding retained_intron MGP_CBAJ_T0065706.1 MGP_CBAJ_G0028062.1 mouse_genomes_project 4 86623892 86641744 - MGP_CBAJ_P0065706 Mpdz protein_coding protein_coding MGP_CBAJ_T0065707.1 MGP_CBAJ_G0028062.1 mouse_genomes_project 4 86629142 86630852 - Mpdz protein_coding retained_intron MGP_CBAJ_T0065708.1 MGP_CBAJ_G0028062.1 mouse_genomes_project 4 86629526 86638772 - MGP_CBAJ_P0065708 Mpdz protein_coding protein_coding MGP_CBAJ_T0065709.1 MGP_CBAJ_G0028062.1 mouse_genomes_project 4 86630729 86634229 - Mpdz protein_coding retained_intron MGP_CBAJ_T0065710.1 MGP_CBAJ_G0028062.1 mouse_genomes_project 4 86636045 86638989 - Mpdz protein_coding retained_intron MGP_CBAJ_T0065711.1 MGP_CBAJ_G0028062.1 mouse_genomes_project 4 86638718 86639334 - Mpdz protein_coding retained_intron MGP_CBAJ_T0065712.1 MGP_CBAJ_G0028062.1 mouse_genomes_project 4 86655425 86669149 - MGP_CBAJ_P0065712 Mpdz protein_coding protein_coding MGP_CBAJ_T0065713.1 MGP_CBAJ_G0028062.1 mouse_genomes_project 4 86668971 86684695 - MGP_CBAJ_P0065713 Mpdz protein_coding protein_coding MGP_CBAJ_T0065714.1 MGP_CBAJ_G0028062.1 mouse_genomes_project 4 86668993 86687484 - MGP_CBAJ_P0065714 Mpdz protein_coding protein_coding MGP_CBAJ_T0065715.1 MGP_CBAJ_G0028062.1 mouse_genomes_project 4 86697149 86716525 - MGP_CBAJ_P0065715 Mpdz protein_coding protein_coding MGP_CBAJ_T0065716.1 MGP_CBAJ_G0028062.1 mouse_genomes_project 4 86760804 86793071 - Mpdz protein_coding retained_intron MGP_CBAJ_T0014495.1 MGP_CBAJ_G0012607.1 mouse_genomes_project 4 115522376 115523392 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007864.1 MGP_CBAJ_G0006417.1 mouse_genomes_project 4 140281807 140284737 + lincRNA lincRNA MGP_CBAJ_T0007865.1 MGP_CBAJ_G0006417.1 mouse_genomes_project 4 140281817 140284602 + lincRNA lincRNA MGP_CBAJ_T0007866.1 MGP_CBAJ_G0006417.1 mouse_genomes_project 4 140281849 140284356 + lincRNA lincRNA MGP_CBAJ_T0007867.1 MGP_CBAJ_G0006417.1 mouse_genomes_project 4 140282024 140305523 + lincRNA lincRNA MGP_CBAJ_T0067323.1 MGP_CBAJ_G0028425.1 mouse_genomes_project 4 134795094 134802463 + MGP_CBAJ_P0067323 Snip1 protein_coding protein_coding MGP_CBAJ_T0067324.1 MGP_CBAJ_G0028425.1 mouse_genomes_project 4 134795124 134799722 + Snip1 protein_coding processed_transcript MGP_CBAJ_T0014277.1 MGP_CBAJ_G0012389.1 mouse_genomes_project 4 26137341 26137611 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067455.1 MGP_CBAJ_G0028453.1 mouse_genomes_project 4 136911075 136926309 - MGP_CBAJ_P0067455 Zmym1 protein_coding protein_coding MGP_CBAJ_T0067456.1 MGP_CBAJ_G0028453.1 mouse_genomes_project 4 136911574 136924148 - MGP_CBAJ_P0067456 Zmym1 protein_coding protein_coding MGP_CBAJ_T0067457.1 MGP_CBAJ_G0028453.1 mouse_genomes_project 4 136911623 136926217 - Zmym1 protein_coding processed_transcript MGP_CBAJ_T0067458.1 MGP_CBAJ_G0028453.1 mouse_genomes_project 4 136911623 136926281 - MGP_CBAJ_P0067458 Zmym1 protein_coding protein_coding MGP_CBAJ_T0067459.1 MGP_CBAJ_G0028453.1 mouse_genomes_project 4 136912646 136924043 - Zmym1 protein_coding processed_transcript MGP_CBAJ_T0067460.1 MGP_CBAJ_G0028453.1 mouse_genomes_project 4 136918269 136922737 - Zmym1 protein_coding processed_transcript MGP_CBAJ_T0067461.1 MGP_CBAJ_G0028453.1 mouse_genomes_project 4 136918308 136926243 - MGP_CBAJ_P0067461 Zmym1 protein_coding protein_coding MGP_CBAJ_T0004421.1 MGP_CBAJ_G0003841.1 mouse_genomes_project 4 118531853 118532928 - Dmrta2os antisense antisense MGP_CBAJ_T0004422.1 MGP_CBAJ_G0003841.1 mouse_genomes_project 4 118531862 118532606 - Dmrta2os antisense antisense MGP_CBAJ_T0067002.1 MGP_CBAJ_G0028333.1 mouse_genomes_project 4 127507559 127526093 - MGP_CBAJ_P0067002 Tie1 protein_coding protein_coding MGP_CBAJ_T0067003.1 MGP_CBAJ_G0028333.1 mouse_genomes_project 4 127507559 127526399 - MGP_CBAJ_P0067003 Tie1 protein_coding protein_coding MGP_CBAJ_T0067004.1 MGP_CBAJ_G0028333.1 mouse_genomes_project 4 127514417 127526131 - Tie1 protein_coding processed_transcript MGP_CBAJ_T0068678.1 MGP_CBAJ_G0028726.1 mouse_genomes_project 4 154733945 154860086 - MGP_CBAJ_P0068678 protein_coding protein_coding MGP_CBAJ_T0068679.1 MGP_CBAJ_G0028726.1 mouse_genomes_project 4 154745877 154751726 - protein_coding processed_transcript MGP_CBAJ_T0068680.1 MGP_CBAJ_G0028726.1 mouse_genomes_project 4 154751847 154803577 - MGP_CBAJ_P0068680 protein_coding protein_coding MGP_CBAJ_T0068681.1 MGP_CBAJ_G0028726.1 mouse_genomes_project 4 154783857 154894923 - MGP_CBAJ_P0068681 protein_coding protein_coding MGP_CBAJ_T0068682.1 MGP_CBAJ_G0028726.1 mouse_genomes_project 4 154783864 154859988 - MGP_CBAJ_P0068682 protein_coding protein_coding MGP_CBAJ_T0068683.1 MGP_CBAJ_G0028726.1 mouse_genomes_project 4 154783865 154791076 - protein_coding retained_intron MGP_CBAJ_T0068684.1 MGP_CBAJ_G0028726.1 mouse_genomes_project 4 154786166 154860086 - MGP_CBAJ_P0068684 protein_coding protein_coding MGP_CBAJ_T0068685.1 MGP_CBAJ_G0028726.1 mouse_genomes_project 4 154791380 154799178 - protein_coding retained_intron MGP_CBAJ_T0064349.1 MGP_CBAJ_G0027737.1 mouse_genomes_project 4 11210171 11374235 + MGP_CBAJ_P0064349 Runx1t1 protein_coding protein_coding MGP_CBAJ_T0064350.1 MGP_CBAJ_G0027737.1 mouse_genomes_project 4 11218032 11317370 + Runx1t1 protein_coding processed_transcript MGP_CBAJ_T0064351.1 MGP_CBAJ_G0027737.1 mouse_genomes_project 4 11218032 11374214 + MGP_CBAJ_P0064351 Runx1t1 protein_coding protein_coding MGP_CBAJ_T0064352.1 MGP_CBAJ_G0027737.1 mouse_genomes_project 4 11238007 11370882 + MGP_CBAJ_P0064352 Runx1t1 protein_coding protein_coding MGP_CBAJ_T0064353.1 MGP_CBAJ_G0027737.1 mouse_genomes_project 4 11251452 11371708 + MGP_CBAJ_P0064353 Runx1t1 protein_coding protein_coding MGP_CBAJ_T0064354.1 MGP_CBAJ_G0027737.1 mouse_genomes_project 4 11369778 11370521 + Runx1t1 protein_coding processed_transcript MGP_CBAJ_T0010456.1 MGP_CBAJ_G0008594.1 mouse_genomes_project 4 33238030 33238159 + Mir8118 miRNA miRNA MGP_CBAJ_T0064355.1 MGP_CBAJ_G0027738.1 mouse_genomes_project 4 12040302 12179806 - MGP_CBAJ_P0064355 Slc26a7 protein_coding protein_coding MGP_CBAJ_T0064356.1 MGP_CBAJ_G0027738.1 mouse_genomes_project 4 12043161 12058696 - Slc26a7 protein_coding processed_transcript MGP_CBAJ_T0064357.1 MGP_CBAJ_G0027738.1 mouse_genomes_project 4 12043339 12179775 - MGP_CBAJ_P0064357 Slc26a7 protein_coding unknown_likely_coding MGP_CBAJ_T0064358.1 MGP_CBAJ_G0027738.1 mouse_genomes_project 4 12110784 12179504 - MGP_CBAJ_P0064358 Slc26a7 protein_coding protein_coding MGP_CBAJ_T0064359.1 MGP_CBAJ_G0027738.1 mouse_genomes_project 4 12146140 12179670 - MGP_CBAJ_P0064359 Slc26a7 protein_coding protein_coding MGP_CBAJ_T0017793.1 MGP_CBAJ_G0015290.1 mouse_genomes_project 4 55556369 55568706 - 4930412L05Rik processed_transcript processed_transcript MGP_CBAJ_T0017794.1 MGP_CBAJ_G0015290.1 mouse_genomes_project 4 55565820 55569002 - 4930412L05Rik processed_transcript processed_transcript MGP_CBAJ_T0007694.1 MGP_CBAJ_G0006282.1 mouse_genomes_project 4 6302257 6304850 - Gm26548 lincRNA lincRNA MGP_CBAJ_T0066664.1 MGP_CBAJ_G0028271.1 mouse_genomes_project 4 124443657 124456634 + MGP_CBAJ_P0066664 Atpaf1 protein_coding protein_coding MGP_CBAJ_T0066665.1 MGP_CBAJ_G0028271.1 mouse_genomes_project 4 124443659 124468822 + MGP_CBAJ_P0066665 Atpaf1 protein_coding protein_coding MGP_CBAJ_T0066666.1 MGP_CBAJ_G0028271.1 mouse_genomes_project 4 124443897 124473743 + MGP_CBAJ_P0066666 Atpaf1 protein_coding protein_coding MGP_CBAJ_T0066667.1 MGP_CBAJ_G0028271.1 mouse_genomes_project 4 124444058 124473736 + MGP_CBAJ_P0066667 Atpaf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066668.1 MGP_CBAJ_G0028271.1 mouse_genomes_project 4 124459012 124478272 + MGP_CBAJ_P0066668 Atpaf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068301.1 MGP_CBAJ_G0028633.1 mouse_genomes_project 4 148119985 148145368 + MGP_CBAJ_P0068301 Lactbl1 protein_coding protein_coding MGP_CBAJ_T0068186.1 MGP_CBAJ_G0028605.1 mouse_genomes_project 4 146670997 146695480 - MGP_CBAJ_P0068186 Rcan3 protein_coding protein_coding MGP_CBAJ_T0068187.1 MGP_CBAJ_G0028605.1 mouse_genomes_project 4 146670997 146687043 - MGP_CBAJ_P0068187 Rcan3 protein_coding protein_coding MGP_CBAJ_T0068188.1 MGP_CBAJ_G0028605.1 mouse_genomes_project 4 146677135 146695450 - MGP_CBAJ_P0068188 Rcan3 protein_coding protein_coding MGP_CBAJ_T0067903.1 MGP_CBAJ_G0028542.1 mouse_genomes_project 4 143423799 143441885 - MGP_CBAJ_P0067903 Themis2 protein_coding protein_coding MGP_CBAJ_T0014483.1 MGP_CBAJ_G0012595.1 mouse_genomes_project 4 111328100 111329454 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100514.1 MGP_CBAJ_G0038769.1 mouse_genomes_project 4 11577114 11577246 - Gm24068 snoRNA snoRNA MGP_CBAJ_T0014444.1 MGP_CBAJ_G0012556.1 mouse_genomes_project 4 96668413 96669405 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0067390.1 MGP_CBAJ_G0028440.1 mouse_genomes_project 4 136082860 136088183 - Adprhl2 protein_coding processed_transcript MGP_CBAJ_T0067391.1 MGP_CBAJ_G0028440.1 mouse_genomes_project 4 136082860 136088517 - MGP_CBAJ_P0067391 Adprhl2 protein_coding protein_coding MGP_CBAJ_T0067392.1 MGP_CBAJ_G0028440.1 mouse_genomes_project 4 136082865 136088281 - Adprhl2 protein_coding processed_transcript MGP_CBAJ_T0067393.1 MGP_CBAJ_G0028440.1 mouse_genomes_project 4 136084964 136088175 - Adprhl2 protein_coding processed_transcript MGP_CBAJ_T0067269.1 MGP_CBAJ_G0028409.1 mouse_genomes_project 4 133535503 133536022 - MGP_CBAJ_P0067269 4930535I16Rik protein_coding protein_coding MGP_CBAJ_T0069228.1 MGP_CBAJ_G0028858.1 mouse_genomes_project 4 169015336 169140137 + MGP_CBAJ_P0069228 Megf6 protein_coding protein_coding MGP_CBAJ_T0069229.1 MGP_CBAJ_G0028858.1 mouse_genomes_project 4 169092023 169136163 + MGP_CBAJ_P0069229 Megf6 protein_coding protein_coding MGP_CBAJ_T0069230.1 MGP_CBAJ_G0028858.1 mouse_genomes_project 4 169107485 169110408 + Megf6 protein_coding retained_intron MGP_CBAJ_T0069231.1 MGP_CBAJ_G0028858.1 mouse_genomes_project 4 169129053 169139608 + Megf6 protein_coding processed_transcript MGP_CBAJ_T0069232.1 MGP_CBAJ_G0028858.1 mouse_genomes_project 4 169130609 169134969 + MGP_CBAJ_P0069232 Megf6 protein_coding protein_coding MGP_CBAJ_T0069233.1 MGP_CBAJ_G0028858.1 mouse_genomes_project 4 169134224 169138552 + Megf6 protein_coding retained_intron MGP_CBAJ_T0069234.1 MGP_CBAJ_G0028858.1 mouse_genomes_project 4 169134319 169135475 + Megf6 protein_coding retained_intron MGP_CBAJ_T0065694.1 MGP_CBAJ_G0028058.1 mouse_genomes_project 4 85222189 85222690 - MGP_CBAJ_P0065694 mt-Nd6 protein_coding protein_coding MGP_CBAJ_T0065943.1 MGP_CBAJ_G0028120.1 mouse_genomes_project 4 102310262 102626598 + Fggy protein_coding processed_transcript MGP_CBAJ_T0065944.1 MGP_CBAJ_G0028120.1 mouse_genomes_project 4 102310270 102720367 + Fggy protein_coding processed_transcript MGP_CBAJ_T0065945.1 MGP_CBAJ_G0028120.1 mouse_genomes_project 4 102310271 102348696 + MGP_CBAJ_P0065945 Fggy protein_coding protein_coding MGP_CBAJ_T0065946.1 MGP_CBAJ_G0028120.1 mouse_genomes_project 4 102332080 102604320 + MGP_CBAJ_P0065946 Fggy protein_coding protein_coding MGP_CBAJ_T0065947.1 MGP_CBAJ_G0028120.1 mouse_genomes_project 4 102332143 102352097 + Fggy protein_coding processed_transcript MGP_CBAJ_T0065948.1 MGP_CBAJ_G0028120.1 mouse_genomes_project 4 102332148 102348702 + MGP_CBAJ_P0065948 Fggy protein_coding protein_coding MGP_CBAJ_T0065949.1 MGP_CBAJ_G0028120.1 mouse_genomes_project 4 102332153 102546539 + MGP_CBAJ_P0065949 Fggy protein_coding protein_coding MGP_CBAJ_T0065950.1 MGP_CBAJ_G0028120.1 mouse_genomes_project 4 102337119 102720371 + MGP_CBAJ_P0065950 Fggy protein_coding unknown_likely_coding MGP_CBAJ_T0065951.1 MGP_CBAJ_G0028120.1 mouse_genomes_project 4 102338213 102595264 + MGP_CBAJ_P0065951 Fggy protein_coding nonsense_mediated_decay MGP_CBAJ_T0065952.1 MGP_CBAJ_G0028120.1 mouse_genomes_project 4 102338213 102720236 + MGP_CBAJ_P0065952 Fggy protein_coding protein_coding MGP_CBAJ_T0065953.1 MGP_CBAJ_G0028120.1 mouse_genomes_project 4 102339884 102513264 + Fggy protein_coding processed_transcript MGP_CBAJ_T0065954.1 MGP_CBAJ_G0028120.1 mouse_genomes_project 4 102377408 102666144 + Fggy protein_coding processed_transcript MGP_CBAJ_T0065955.1 MGP_CBAJ_G0028120.1 mouse_genomes_project 4 102377415 102513321 + MGP_CBAJ_P0065955 Fggy protein_coding nonsense_mediated_decay MGP_CBAJ_T0065956.1 MGP_CBAJ_G0028120.1 mouse_genomes_project 4 102391571 102604733 + Fggy protein_coding processed_transcript MGP_CBAJ_T0065957.1 MGP_CBAJ_G0028120.1 mouse_genomes_project 4 102512806 102546548 + Fggy protein_coding processed_transcript MGP_CBAJ_T0065958.1 MGP_CBAJ_G0028120.1 mouse_genomes_project 4 102546611 102720371 + MGP_CBAJ_P0065958 Fggy protein_coding protein_coding MGP_CBAJ_T0065959.1 MGP_CBAJ_G0028120.1 mouse_genomes_project 4 102604728 102720236 + MGP_CBAJ_P0065959 Fggy protein_coding protein_coding MGP_CBAJ_T0065960.1 MGP_CBAJ_G0028120.1 mouse_genomes_project 4 102635569 102720366 + MGP_CBAJ_P0065960 Fggy protein_coding nonsense_mediated_decay MGP_CBAJ_T0068445.1 MGP_CBAJ_G0028669.1 mouse_genomes_project 4 151016962 151018211 + MGP_CBAJ_P0068445 Rnf186 protein_coding protein_coding MGP_CBAJ_T0004531.1 MGP_CBAJ_G0003928.1 mouse_genomes_project 4 170777549 170779726 - 1500002C15Rik antisense antisense MGP_CBAJ_T0004532.1 MGP_CBAJ_G0003928.1 mouse_genomes_project 4 170777552 170779626 - 1500002C15Rik antisense antisense MGP_CBAJ_T0067562.1 MGP_CBAJ_G0028478.1 mouse_genomes_project 4 139336413 139368552 + MGP_CBAJ_P0067562 Yars protein_coding protein_coding MGP_CBAJ_T0067563.1 MGP_CBAJ_G0028478.1 mouse_genomes_project 4 139336555 139344095 + Yars protein_coding retained_intron MGP_CBAJ_T0067564.1 MGP_CBAJ_G0028478.1 mouse_genomes_project 4 139343768 139359514 + MGP_CBAJ_P0067564 Yars protein_coding nonsense_mediated_decay MGP_CBAJ_T0067565.1 MGP_CBAJ_G0028478.1 mouse_genomes_project 4 139343887 139357617 + Yars protein_coding processed_transcript MGP_CBAJ_T0067566.1 MGP_CBAJ_G0028478.1 mouse_genomes_project 4 139358539 139359788 + Yars protein_coding retained_intron MGP_CBAJ_T0067567.1 MGP_CBAJ_G0028478.1 mouse_genomes_project 4 139361168 139364671 + Yars protein_coding retained_intron MGP_CBAJ_T0067568.1 MGP_CBAJ_G0028478.1 mouse_genomes_project 4 139361620 139367608 + Yars protein_coding processed_transcript MGP_CBAJ_T0067569.1 MGP_CBAJ_G0028478.1 mouse_genomes_project 4 139362710 139363879 + Yars protein_coding retained_intron MGP_CBAJ_T0067589.1 MGP_CBAJ_G0028485.1 mouse_genomes_project 4 139700977 139727733 + MGP_CBAJ_P0067589 Bsdc1 protein_coding protein_coding MGP_CBAJ_T0067590.1 MGP_CBAJ_G0028485.1 mouse_genomes_project 4 139701068 139706385 + Bsdc1 protein_coding processed_transcript MGP_CBAJ_T0067591.1 MGP_CBAJ_G0028485.1 mouse_genomes_project 4 139701080 139709569 + Bsdc1 protein_coding retained_intron MGP_CBAJ_T0067592.1 MGP_CBAJ_G0028485.1 mouse_genomes_project 4 139701080 139706373 + Bsdc1 protein_coding processed_transcript MGP_CBAJ_T0067593.1 MGP_CBAJ_G0028485.1 mouse_genomes_project 4 139701083 139705358 + Bsdc1 protein_coding retained_intron MGP_CBAJ_T0067594.1 MGP_CBAJ_G0028485.1 mouse_genomes_project 4 139701232 139706385 + MGP_CBAJ_P0067594 Bsdc1 protein_coding protein_coding MGP_CBAJ_T0067595.1 MGP_CBAJ_G0028485.1 mouse_genomes_project 4 139703938 139704937 + Bsdc1 protein_coding processed_transcript MGP_CBAJ_T0067596.1 MGP_CBAJ_G0028485.1 mouse_genomes_project 4 139711267 139713307 + Bsdc1 protein_coding retained_intron MGP_CBAJ_T0017772.1 MGP_CBAJ_G0015276.1 mouse_genomes_project 4 9331948 9359594 + 1700123M08Rik processed_transcript processed_transcript MGP_CBAJ_T0017773.1 MGP_CBAJ_G0015276.1 mouse_genomes_project 4 9331957 9359313 + 1700123M08Rik processed_transcript processed_transcript MGP_CBAJ_T0017774.1 MGP_CBAJ_G0015276.1 mouse_genomes_project 4 9345544 9347044 + 1700123M08Rik processed_transcript processed_transcript MGP_CBAJ_T0100539.1 MGP_CBAJ_G0038794.1 mouse_genomes_project 4 58057961 58058095 - Gm22150 snoRNA snoRNA MGP_CBAJ_T0068411.1 MGP_CBAJ_G0028657.1 mouse_genomes_project 4 150239733 150244952 - Cda protein_coding retained_intron MGP_CBAJ_T0068412.1 MGP_CBAJ_G0028657.1 mouse_genomes_project 4 150239837 150280950 - MGP_CBAJ_P0068412 Cda protein_coding protein_coding MGP_CBAJ_T0066559.1 MGP_CBAJ_G0028243.1 mouse_genomes_project 4 120088466 120136984 + MGP_CBAJ_P0066559 Bend5 protein_coding protein_coding MGP_CBAJ_T0066560.1 MGP_CBAJ_G0028243.1 mouse_genomes_project 4 120088507 120108572 + Bend5 protein_coding processed_transcript MGP_CBAJ_T0066561.1 MGP_CBAJ_G0028243.1 mouse_genomes_project 4 120088548 120136606 + Bend5 protein_coding processed_transcript MGP_CBAJ_T0066562.1 MGP_CBAJ_G0028243.1 mouse_genomes_project 4 120088667 120094003 + Bend5 protein_coding processed_transcript MGP_CBAJ_T0066563.1 MGP_CBAJ_G0028243.1 mouse_genomes_project 4 120108522 120136982 + MGP_CBAJ_P0066563 Bend5 protein_coding protein_coding MGP_CBAJ_T0066564.1 MGP_CBAJ_G0028243.1 mouse_genomes_project 4 120108644 120136613 + Bend5 protein_coding processed_transcript MGP_CBAJ_T0100553.1 MGP_CBAJ_G0038808.1 mouse_genomes_project 4 79141356 79141488 + Gm26379 snoRNA snoRNA MGP_CBAJ_T0014493.1 MGP_CBAJ_G0012605.1 mouse_genomes_project 4 114887024 114887238 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0066641.1 MGP_CBAJ_G0028263.1 mouse_genomes_project 4 123938223 123954075 + MGP_CBAJ_P0066641 Cyp4a30b protein_coding protein_coding MGP_CBAJ_T0014278.1 MGP_CBAJ_G0012390.1 mouse_genomes_project 4 26538664 26539101 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010472.1 MGP_CBAJ_G0008610.1 mouse_genomes_project 4 71377826 71377903 + Gm44497 miRNA miRNA MGP_CBAJ_T0010457.1 MGP_CBAJ_G0008595.1 mouse_genomes_project 4 36794981 36795062 - Mir876 miRNA miRNA MGP_CBAJ_T0014597.1 MGP_CBAJ_G0012709.1 mouse_genomes_project 4 153783938 153784142 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0069480.1 MGP_CBAJ_G0028904.1 mouse_genomes_project 4 171042743 171047026 + MGP_CBAJ_P0069480 Fam132a protein_coding protein_coding MGP_CBAJ_T0069481.1 MGP_CBAJ_G0028904.1 mouse_genomes_project 4 171044969 171045591 + Fam132a protein_coding processed_transcript MGP_CBAJ_T0069482.1 MGP_CBAJ_G0028904.1 mouse_genomes_project 4 171045505 171047018 + Fam132a protein_coding processed_transcript MGP_CBAJ_T0014502.1 MGP_CBAJ_G0012614.1 mouse_genomes_project 4 117136979 117137535 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0065194.1 MGP_CBAJ_G0027920.1 mouse_genomes_project 4 47541065 47584441 - MGP_CBAJ_P0065194 Xpa protein_coding protein_coding MGP_CBAJ_T0065197.1 MGP_CBAJ_G0027920.1 mouse_genomes_project 4 47560912 47571377 - Xpa protein_coding processed_transcript MGP_CBAJ_T0065198.1 MGP_CBAJ_G0027920.1 mouse_genomes_project 4 47560912 47571344 - MGP_CBAJ_P0065198 Xpa protein_coding nonsense_mediated_decay MGP_CBAJ_T0065199.1 MGP_CBAJ_G0027920.1 mouse_genomes_project 4 47560912 47584441 - MGP_CBAJ_P0065199 Xpa protein_coding protein_coding MGP_CBAJ_T0065200.1 MGP_CBAJ_G0027920.1 mouse_genomes_project 4 47563955 47584350 - MGP_CBAJ_P0065200 Xpa protein_coding unknown_likely_coding MGP_CBAJ_T0065201.1 MGP_CBAJ_G0027920.1 mouse_genomes_project 4 47568663 47584434 - MGP_CBAJ_P0065201 Xpa protein_coding protein_coding MGP_CBAJ_T0065202.1 MGP_CBAJ_G0027920.1 mouse_genomes_project 4 47570106 47572292 - Xpa protein_coding processed_transcript MGP_CBAJ_T0065032.1 MGP_CBAJ_G0027886.1 mouse_genomes_project 4 44719887 44725679 - MGP_CBAJ_P0065032 Olfr70 protein_coding protein_coding MGP_CBAJ_T0066074.1 MGP_CBAJ_G0028147.1 mouse_genomes_project 4 107095873 107098256 + MGP_CBAJ_P0066074 Efcab7 protein_coding protein_coding MGP_CBAJ_T0066075.1 MGP_CBAJ_G0028147.1 mouse_genomes_project 4 107096115 107098256 + MGP_CBAJ_P0066075 Efcab7 protein_coding protein_coding MGP_CBAJ_T0066076.1 MGP_CBAJ_G0028147.1 mouse_genomes_project 4 107096175 107098256 + MGP_CBAJ_P0066076 Efcab7 protein_coding protein_coding MGP_CBAJ_T0066077.1 MGP_CBAJ_G0028147.1 mouse_genomes_project 4 107098069 107188928 + MGP_CBAJ_P0066077 Efcab7 protein_coding unknown_likely_coding MGP_CBAJ_T0066078.1 MGP_CBAJ_G0028147.1 mouse_genomes_project 4 107098069 107188928 + MGP_CBAJ_P0066078 Efcab7 protein_coding protein_coding MGP_CBAJ_T0066079.1 MGP_CBAJ_G0028147.1 mouse_genomes_project 4 107185897 107189106 + MGP_CBAJ_P0066079 Efcab7 protein_coding protein_coding MGP_CBAJ_T0068608.1 MGP_CBAJ_G0028708.1 mouse_genomes_project 4 153865781 153870308 + MGP_CBAJ_P0068608 Hspb7 protein_coding protein_coding MGP_CBAJ_T0068084.1 MGP_CBAJ_G0028582.1 mouse_genomes_project 4 145232791 145235785 - MGP_CBAJ_P0068084 Grrp1 protein_coding protein_coding MGP_CBAJ_T0068085.1 MGP_CBAJ_G0028582.1 mouse_genomes_project 4 145233387 145234701 - Grrp1 protein_coding processed_transcript MGP_CBAJ_T0068311.1 MGP_CBAJ_G0028637.1 mouse_genomes_project 4 148458789 148461676 - MGP_CBAJ_P0068311 C1qa protein_coding protein_coding MGP_CBAJ_T0007868.1 MGP_CBAJ_G0006418.1 mouse_genomes_project 4 140356001 140362524 + lincRNA lincRNA MGP_CBAJ_T0007869.1 MGP_CBAJ_G0006418.1 mouse_genomes_project 4 140359805 140362661 + lincRNA lincRNA MGP_CBAJ_T0064486.1 MGP_CBAJ_G0027777.1 mouse_genomes_project 4 25133535 25156204 - MGP_CBAJ_P0064486 Manea protein_coding protein_coding MGP_CBAJ_T0064487.1 MGP_CBAJ_G0027777.1 mouse_genomes_project 4 25137074 25150319 - Manea protein_coding processed_transcript MGP_CBAJ_T0064488.1 MGP_CBAJ_G0027777.1 mouse_genomes_project 4 25149883 25156167 - Manea protein_coding processed_transcript MGP_CBAJ_T0064489.1 MGP_CBAJ_G0027777.1 mouse_genomes_project 4 25150174 25156204 - MGP_CBAJ_P0064489 Manea protein_coding protein_coding MGP_CBAJ_T0014412.1 MGP_CBAJ_G0012524.1 mouse_genomes_project 4 80529363 80530259 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007750.1 MGP_CBAJ_G0006328.1 mouse_genomes_project 4 58033066 58054833 - Gm12510 lincRNA lincRNA MGP_CBAJ_T0067597.1 MGP_CBAJ_G0028486.1 mouse_genomes_project 4 139728248 139730257 - MGP_CBAJ_P0067597 Tssk3 protein_coding protein_coding MGP_CBAJ_T0068725.1 MGP_CBAJ_G0028751.1 mouse_genomes_project 4 157450828 157470346 + MGP_CBAJ_P0068725 protein_coding protein_coding MGP_CBAJ_T0064946.1 MGP_CBAJ_G0027872.1 mouse_genomes_project 4 44475754 44477060 + Ccdc107 protein_coding processed_transcript MGP_CBAJ_T0064947.1 MGP_CBAJ_G0027872.1 mouse_genomes_project 4 44476216 44478776 + MGP_CBAJ_P0064947 Ccdc107 protein_coding protein_coding MGP_CBAJ_T0064948.1 MGP_CBAJ_G0027872.1 mouse_genomes_project 4 44476231 44476665 + Ccdc107 protein_coding processed_transcript MGP_CBAJ_T0064949.1 MGP_CBAJ_G0027872.1 mouse_genomes_project 4 44476243 44478776 + MGP_CBAJ_P0064949 Ccdc107 protein_coding protein_coding MGP_CBAJ_T0064950.1 MGP_CBAJ_G0027872.1 mouse_genomes_project 4 44476271 44478719 + Ccdc107 protein_coding processed_transcript MGP_CBAJ_T0064951.1 MGP_CBAJ_G0027872.1 mouse_genomes_project 4 44476271 44478726 + Ccdc107 protein_coding processed_transcript MGP_CBAJ_T0065871.1 MGP_CBAJ_G0028091.1 mouse_genomes_project 4 94708659 94715561 - MGP_CBAJ_P0065871 C87499 protein_coding protein_coding MGP_CBAJ_T0065872.1 MGP_CBAJ_G0028091.1 mouse_genomes_project 4 94708659 94715513 - MGP_CBAJ_P0065872 C87499 protein_coding protein_coding MGP_CBAJ_T0065873.1 MGP_CBAJ_G0028091.1 mouse_genomes_project 4 94709508 94715713 - MGP_CBAJ_P0065873 C87499 protein_coding protein_coding MGP_CBAJ_T0065874.1 MGP_CBAJ_G0028091.1 mouse_genomes_project 4 94710237 94715444 - MGP_CBAJ_P0065874 C87499 protein_coding protein_coding MGP_CBAJ_T0065875.1 MGP_CBAJ_G0028091.1 mouse_genomes_project 4 94710527 94715493 - MGP_CBAJ_P0065875 C87499 protein_coding protein_coding MGP_CBAJ_T0064944.1 MGP_CBAJ_G0027871.1 mouse_genomes_project 4 44462584 44464238 - MGP_CBAJ_P0064944 Sit1 protein_coding protein_coding MGP_CBAJ_T0064945.1 MGP_CBAJ_G0027871.1 mouse_genomes_project 4 44462690 44463726 - Sit1 protein_coding processed_transcript MGP_CBAJ_T0014242.1 MGP_CBAJ_G0012354.1 mouse_genomes_project 4 15152272 15152533 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0067185.1 MGP_CBAJ_G0028389.1 mouse_genomes_project 4 130821473 130824468 - MGP_CBAJ_P0067185 Gm12886 protein_coding protein_coding MGP_CBAJ_T0014228.1 MGP_CBAJ_G0012340.1 mouse_genomes_project 4 13186540 13186995 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0066610.1 MGP_CBAJ_G0028251.1 mouse_genomes_project 4 122467513 122540903 + MGP_CBAJ_P0066610 Skint11 protein_coding protein_coding MGP_CBAJ_T0066611.1 MGP_CBAJ_G0028251.1 mouse_genomes_project 4 122467513 122540903 + MGP_CBAJ_P0066611 Skint11 protein_coding protein_coding MGP_CBAJ_T0065480.1 MGP_CBAJ_G0028000.1 mouse_genomes_project 4 62149216 62188113 + MGP_CBAJ_P0065480 Ugcg protein_coding protein_coding MGP_CBAJ_T0065481.1 MGP_CBAJ_G0028000.1 mouse_genomes_project 4 62149514 62173298 + Ugcg protein_coding processed_transcript MGP_CBAJ_T0065482.1 MGP_CBAJ_G0028000.1 mouse_genomes_project 4 62149600 62184967 + MGP_CBAJ_P0065482 Ugcg protein_coding unknown_likely_coding MGP_CBAJ_T0065483.1 MGP_CBAJ_G0028000.1 mouse_genomes_project 4 62172814 62175006 + Ugcg protein_coding processed_transcript MGP_CBAJ_T0065484.1 MGP_CBAJ_G0028000.1 mouse_genomes_project 4 62173750 62175390 + Ugcg protein_coding processed_transcript MGP_CBAJ_T0004345.1 MGP_CBAJ_G0003785.1 mouse_genomes_project 4 18615874 18619940 + Gm11872 antisense antisense MGP_CBAJ_T0100552.1 MGP_CBAJ_G0038807.1 mouse_genomes_project 4 79141351 79141489 + Gm26379 snoRNA snoRNA MGP_CBAJ_T0004385.1 MGP_CBAJ_G0003820.1 mouse_genomes_project 4 92379688 92381042 + Saxo1os antisense antisense MGP_CBAJ_T0014491.1 MGP_CBAJ_G0012603.1 mouse_genomes_project 4 114170938 114172606 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0069412.1 MGP_CBAJ_G0028891.1 mouse_genomes_project 4 170837265 170844140 - MGP_CBAJ_P0069412 Tmem88b protein_coding protein_coding MGP_CBAJ_T0014596.1 MGP_CBAJ_G0012708.1 mouse_genomes_project 4 153439105 153439920 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100551.1 MGP_CBAJ_G0038806.1 mouse_genomes_project 4 77861141 77861274 - Gm24170 snoRNA snoRNA MGP_CBAJ_T0068508.1 MGP_CBAJ_G0028684.1 mouse_genomes_project 4 151881696 151981338 - MGP_CBAJ_P0068508 Pax7 protein_coding protein_coding MGP_CBAJ_T0068509.1 MGP_CBAJ_G0028684.1 mouse_genomes_project 4 151885359 151980817 - MGP_CBAJ_P0068509 Pax7 protein_coding protein_coding MGP_CBAJ_T0065616.1 MGP_CBAJ_G0028038.1 mouse_genomes_project 4 67181249 67199270 - MGP_CBAJ_P0065616 Tnfsf15 protein_coding protein_coding MGP_CBAJ_T0067344.1 MGP_CBAJ_G0028431.1 mouse_genomes_project 4 135808519 135840901 + MGP_CBAJ_P0067344 Oscp1 protein_coding protein_coding MGP_CBAJ_T0067345.1 MGP_CBAJ_G0028431.1 mouse_genomes_project 4 135808635 135840909 + MGP_CBAJ_P0067345 Oscp1 protein_coding unknown_likely_coding MGP_CBAJ_T0067346.1 MGP_CBAJ_G0028431.1 mouse_genomes_project 4 135814658 135837178 + Oscp1 protein_coding processed_transcript MGP_CBAJ_T0067347.1 MGP_CBAJ_G0028431.1 mouse_genomes_project 4 135831618 135833117 + Oscp1 protein_coding processed_transcript MGP_CBAJ_T0067348.1 MGP_CBAJ_G0028431.1 mouse_genomes_project 4 135836415 135837396 + Oscp1 protein_coding processed_transcript MGP_CBAJ_T0099259.1 MGP_CBAJ_G0037514.1 mouse_genomes_project 4 46853430 46853537 + Gm22055 snRNA snRNA MGP_CBAJ_T0064862.1 MGP_CBAJ_G0027863.1 mouse_genomes_project 4 43984440 43988456 - MGP_CBAJ_P0064862 Stoml2 protein_coding protein_coding MGP_CBAJ_T0064863.1 MGP_CBAJ_G0027863.1 mouse_genomes_project 4 43984776 43986584 - Stoml2 protein_coding processed_transcript MGP_CBAJ_T0064864.1 MGP_CBAJ_G0027863.1 mouse_genomes_project 4 43984792 43986661 - Stoml2 protein_coding processed_transcript MGP_CBAJ_T0064865.1 MGP_CBAJ_G0027863.1 mouse_genomes_project 4 43984979 43988202 - MGP_CBAJ_P0064865 Stoml2 protein_coding protein_coding MGP_CBAJ_T0064866.1 MGP_CBAJ_G0027863.1 mouse_genomes_project 4 43984991 43987340 - MGP_CBAJ_P0064866 Stoml2 protein_coding protein_coding MGP_CBAJ_T0064867.1 MGP_CBAJ_G0027863.1 mouse_genomes_project 4 43986310 43988196 - Stoml2 protein_coding processed_transcript MGP_CBAJ_T0064868.1 MGP_CBAJ_G0027863.1 mouse_genomes_project 4 43986343 43988116 - MGP_CBAJ_P0064868 Stoml2 protein_coding protein_coding MGP_CBAJ_T0064869.1 MGP_CBAJ_G0027863.1 mouse_genomes_project 4 43986361 43987246 - Stoml2 protein_coding processed_transcript MGP_CBAJ_T0064870.1 MGP_CBAJ_G0027863.1 mouse_genomes_project 4 43986519 43987347 - Stoml2 protein_coding processed_transcript MGP_CBAJ_T0064871.1 MGP_CBAJ_G0027863.1 mouse_genomes_project 4 43986787 43988104 - Stoml2 protein_coding processed_transcript MGP_CBAJ_T0064872.1 MGP_CBAJ_G0027863.1 mouse_genomes_project 4 43987239 43988182 - Stoml2 protein_coding processed_transcript MGP_CBAJ_T0014448.1 MGP_CBAJ_G0012560.1 mouse_genomes_project 4 97510269 97510875 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100521.1 MGP_CBAJ_G0038776.1 mouse_genomes_project 4 33503705 33503830 - Gm24341 snoRNA snoRNA MGP_CBAJ_T0004426.1 MGP_CBAJ_G0003845.1 mouse_genomes_project 4 125299963 125300841 + Gm12953 antisense antisense MGP_CBAJ_T0014379.1 MGP_CBAJ_G0012491.1 mouse_genomes_project 4 62533001 62533269 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0069490.1 MGP_CBAJ_G0028907.1 mouse_genomes_project 4 171107600 171110382 + MGP_CBAJ_P0069490 Tnfrsf4 protein_coding protein_coding MGP_CBAJ_T0069491.1 MGP_CBAJ_G0028907.1 mouse_genomes_project 4 171107613 171110369 + Tnfrsf4 protein_coding processed_transcript MGP_CBAJ_T0069492.1 MGP_CBAJ_G0028907.1 mouse_genomes_project 4 171108006 171109016 + Tnfrsf4 protein_coding processed_transcript MGP_CBAJ_T0068135.1 MGP_CBAJ_G0028596.1 mouse_genomes_project 4 145896712 145905170 - Tmem57 protein_coding processed_transcript MGP_CBAJ_T0068136.1 MGP_CBAJ_G0028596.1 mouse_genomes_project 4 145896712 145952050 - MGP_CBAJ_P0068136 Tmem57 protein_coding protein_coding MGP_CBAJ_T0068137.1 MGP_CBAJ_G0028596.1 mouse_genomes_project 4 145905150 145951854 - MGP_CBAJ_P0068137 Tmem57 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068138.1 MGP_CBAJ_G0028596.1 mouse_genomes_project 4 145922600 145951968 - MGP_CBAJ_P0068138 Tmem57 protein_coding nonsense_mediated_decay MGP_CBAJ_T0068139.1 MGP_CBAJ_G0028596.1 mouse_genomes_project 4 145935632 145952022 - Tmem57 protein_coding retained_intron MGP_CBAJ_T0068102.1 MGP_CBAJ_G0028588.1 mouse_genomes_project 4 145404139 145437054 + Pafah2 protein_coding processed_transcript MGP_CBAJ_T0068103.1 MGP_CBAJ_G0028588.1 mouse_genomes_project 4 145404176 145428132 + Pafah2 protein_coding processed_transcript MGP_CBAJ_T0068104.1 MGP_CBAJ_G0028588.1 mouse_genomes_project 4 145406106 145423561 + Pafah2 protein_coding processed_transcript MGP_CBAJ_T0068105.1 MGP_CBAJ_G0028588.1 mouse_genomes_project 4 145406340 145447686 + MGP_CBAJ_P0068105 Pafah2 protein_coding protein_coding MGP_CBAJ_T0068106.1 MGP_CBAJ_G0028588.1 mouse_genomes_project 4 145412056 145414210 + MGP_CBAJ_P0068106 Pafah2 protein_coding protein_coding MGP_CBAJ_T0068107.1 MGP_CBAJ_G0028588.1 mouse_genomes_project 4 145412114 145441499 + Pafah2 protein_coding processed_transcript MGP_CBAJ_T0068799.1 MGP_CBAJ_G0028780.1 mouse_genomes_project 4 161814987 161828681 - MGP_CBAJ_P0068799 Agtrap protein_coding protein_coding MGP_CBAJ_T0068800.1 MGP_CBAJ_G0028780.1 mouse_genomes_project 4 161821178 161825419 - Agtrap protein_coding processed_transcript MGP_CBAJ_T0068801.1 MGP_CBAJ_G0028780.1 mouse_genomes_project 4 161824551 161828681 - Agtrap protein_coding retained_intron MGP_CBAJ_T0100554.1 MGP_CBAJ_G0038809.1 mouse_genomes_project 4 79824693 79824823 - Gm22864 snoRNA snoRNA MGP_CBAJ_T0100569.1 MGP_CBAJ_G0038824.1 mouse_genomes_project 4 126026733 126026804 - Snord38a snoRNA snoRNA MGP_CBAJ_T0067803.1 MGP_CBAJ_G0028523.1 mouse_genomes_project 4 142407115 142421441 - MGP_CBAJ_P0067803 Epb41 protein_coding protein_coding MGP_CBAJ_T0067804.1 MGP_CBAJ_G0028523.1 mouse_genomes_project 4 142407117 142421478 - Epb41 protein_coding processed_transcript MGP_CBAJ_T0067805.1 MGP_CBAJ_G0028523.1 mouse_genomes_project 4 142407117 142571329 - Epb41 protein_coding processed_transcript MGP_CBAJ_T0067806.1 MGP_CBAJ_G0028523.1 mouse_genomes_project 4 142407117 142498139 - MGP_CBAJ_P0067806 Epb41 protein_coding protein_coding MGP_CBAJ_T0067807.1 MGP_CBAJ_G0028523.1 mouse_genomes_project 4 142407117 142455984 - MGP_CBAJ_P0067807 Epb41 protein_coding protein_coding MGP_CBAJ_T0067808.1 MGP_CBAJ_G0028523.1 mouse_genomes_project 4 142407117 142571300 - MGP_CBAJ_P0067808 Epb41 protein_coding protein_coding MGP_CBAJ_T0067809.1 MGP_CBAJ_G0028523.1 mouse_genomes_project 4 142407117 142571300 - MGP_CBAJ_P0067809 Epb41 protein_coding protein_coding MGP_CBAJ_T0067810.1 MGP_CBAJ_G0028523.1 mouse_genomes_project 4 142407117 142498140 - MGP_CBAJ_P0067810 Epb41 protein_coding protein_coding MGP_CBAJ_T0067811.1 MGP_CBAJ_G0028523.1 mouse_genomes_project 4 142407117 142494496 - MGP_CBAJ_P0067811 Epb41 protein_coding protein_coding MGP_CBAJ_T0067812.1 MGP_CBAJ_G0028523.1 mouse_genomes_project 4 142407117 142455953 - MGP_CBAJ_P0067812 Epb41 protein_coding protein_coding MGP_CBAJ_T0067813.1 MGP_CBAJ_G0028523.1 mouse_genomes_project 4 142407133 142543024 - MGP_CBAJ_P0067813 Epb41 protein_coding protein_coding MGP_CBAJ_T0067814.1 MGP_CBAJ_G0028523.1 mouse_genomes_project 4 142407133 142566004 - MGP_CBAJ_P0067814 Epb41 protein_coding protein_coding MGP_CBAJ_T0067815.1 MGP_CBAJ_G0028523.1 mouse_genomes_project 4 142407133 142543024 - MGP_CBAJ_P0067815 Epb41 protein_coding protein_coding MGP_CBAJ_T0067816.1 MGP_CBAJ_G0028523.1 mouse_genomes_project 4 142407833 142566004 - Epb41 protein_coding processed_transcript MGP_CBAJ_T0067817.1 MGP_CBAJ_G0028523.1 mouse_genomes_project 4 142410214 142498133 - MGP_CBAJ_P0067817 Epb41 protein_coding protein_coding MGP_CBAJ_T0067818.1 MGP_CBAJ_G0028523.1 mouse_genomes_project 4 142445729 142543037 - MGP_CBAJ_P0067818 Epb41 protein_coding protein_coding MGP_CBAJ_T0067819.1 MGP_CBAJ_G0028523.1 mouse_genomes_project 4 142480238 142491006 - Epb41 protein_coding processed_transcript MGP_CBAJ_T0067820.1 MGP_CBAJ_G0028523.1 mouse_genomes_project 4 142494477 142571272 - Epb41 protein_coding processed_transcript MGP_CBAJ_T0010519.1 MGP_CBAJ_G0008657.1 mouse_genomes_project 4 150227603 150227713 - Gm27646 miRNA miRNA MGP_CBAJ_T0007722.1 MGP_CBAJ_G0006305.1 mouse_genomes_project 4 34001214 34005210 + Gm12753 lincRNA lincRNA MGP_CBAJ_T0066589.1 MGP_CBAJ_G0028246.1 mouse_genomes_project 4 120651892 120671911 + Skint8 protein_coding processed_transcript MGP_CBAJ_T0066590.1 MGP_CBAJ_G0028246.1 mouse_genomes_project 4 120651898 120676386 + MGP_CBAJ_P0066590 Skint8 protein_coding protein_coding MGP_CBAJ_T0066591.1 MGP_CBAJ_G0028246.1 mouse_genomes_project 4 120651993 120674607 + Skint8 protein_coding retained_intron MGP_CBAJ_T0066592.1 MGP_CBAJ_G0028246.1 mouse_genomes_project 4 120652057 120688680 + MGP_CBAJ_P0066592 Skint8 protein_coding protein_coding MGP_CBAJ_T0066593.1 MGP_CBAJ_G0028246.1 mouse_genomes_project 4 120668302 120672059 + Skint8 protein_coding processed_transcript MGP_CBAJ_T0099307.1 MGP_CBAJ_G0037562.1 mouse_genomes_project 4 143033684 143033778 + Gm23055 snRNA snRNA MGP_CBAJ_T0069080.1 MGP_CBAJ_G0028834.1 mouse_genomes_project 4 166538350 166551803 + Nol9 protein_coding retained_intron MGP_CBAJ_T0069081.1 MGP_CBAJ_G0028834.1 mouse_genomes_project 4 166538356 166559593 + MGP_CBAJ_P0069081 Nol9 protein_coding protein_coding MGP_CBAJ_T0069082.1 MGP_CBAJ_G0028834.1 mouse_genomes_project 4 166538365 166555968 + Nol9 protein_coding retained_intron MGP_CBAJ_T0069083.1 MGP_CBAJ_G0028834.1 mouse_genomes_project 4 166538365 166561054 + MGP_CBAJ_P0069083 Nol9 protein_coding protein_coding MGP_CBAJ_T0069084.1 MGP_CBAJ_G0028834.1 mouse_genomes_project 4 166538392 166559611 + MGP_CBAJ_P0069084 Nol9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0066213.1 MGP_CBAJ_G0028180.1 mouse_genomes_project 4 113080910 113160101 + MGP_CBAJ_P0066213 Plpp3 protein_coding protein_coding MGP_CBAJ_T0010512.1 MGP_CBAJ_G0008650.1 mouse_genomes_project 4 146675248 146675327 - Mir700 miRNA miRNA MGP_CBAJ_T0007803.1 MGP_CBAJ_G0006374.1 mouse_genomes_project 4 108744309 108773385 - Gm12796 lincRNA lincRNA MGP_CBAJ_T0067509.1 MGP_CBAJ_G0028468.1 mouse_genomes_project 4 138829757 138845972 + MGP_CBAJ_P0067509 A3galt2 protein_coding protein_coding MGP_CBAJ_T0067510.1 MGP_CBAJ_G0028468.1 mouse_genomes_project 4 138833651 138846682 + MGP_CBAJ_P0067510 A3galt2 protein_coding protein_coding MGP_CBAJ_T0100589.1 MGP_CBAJ_G0038844.1 mouse_genomes_project 4 142878230 142878304 + Snord99 snoRNA snoRNA MGP_CBAJ_T0065815.1 MGP_CBAJ_G0028077.1 mouse_genomes_project 4 92399974 92433518 - MGP_CBAJ_P0065815 Haus6 protein_coding protein_coding MGP_CBAJ_T0065816.1 MGP_CBAJ_G0028077.1 mouse_genomes_project 4 92406297 92433518 - Haus6 protein_coding processed_transcript MGP_CBAJ_T0065817.1 MGP_CBAJ_G0028077.1 mouse_genomes_project 4 92424321 92433482 - Haus6 protein_coding processed_transcript MGP_CBAJ_T0065818.1 MGP_CBAJ_G0028077.1 mouse_genomes_project 4 92427081 92433512 - MGP_CBAJ_P0065818 Haus6 protein_coding protein_coding MGP_CBAJ_T0069373.1 MGP_CBAJ_G0028882.1 mouse_genomes_project 4 170649018 170682067 - MGP_CBAJ_P0069373 Gm10563 protein_coding protein_coding MGP_CBAJ_T0007897.1 MGP_CBAJ_G0006435.1 mouse_genomes_project 4 147767890 147769476 - Gm27022 lincRNA lincRNA MGP_CBAJ_T0068144.1 MGP_CBAJ_G0028599.1 mouse_genomes_project 4 146039687 146043758 + Rsrp1 protein_coding retained_intron MGP_CBAJ_T0068145.1 MGP_CBAJ_G0028599.1 mouse_genomes_project 4 146039687 146043758 + MGP_CBAJ_P0068145 Rsrp1 protein_coding protein_coding MGP_CBAJ_T0068146.1 MGP_CBAJ_G0028599.1 mouse_genomes_project 4 146039688 146041516 + Rsrp1 protein_coding processed_transcript MGP_CBAJ_T0068147.1 MGP_CBAJ_G0028599.1 mouse_genomes_project 4 146039721 146041426 + Rsrp1 protein_coding processed_transcript MGP_CBAJ_T0068148.1 MGP_CBAJ_G0028599.1 mouse_genomes_project 4 146039740 146043459 + Rsrp1 protein_coding processed_transcript MGP_CBAJ_T0068149.1 MGP_CBAJ_G0028599.1 mouse_genomes_project 4 146040555 146043459 + Rsrp1 protein_coding processed_transcript MGP_CBAJ_T0068150.1 MGP_CBAJ_G0028599.1 mouse_genomes_project 4 146040805 146041448 + Rsrp1 protein_coding processed_transcript MGP_CBAJ_T0068151.1 MGP_CBAJ_G0028599.1 mouse_genomes_project 4 146041538 146043040 + Rsrp1 protein_coding processed_transcript MGP_CBAJ_T0065894.1 MGP_CBAJ_G0028107.1 mouse_genomes_project 4 96496670 96503534 + MGP_CBAJ_P0065894 Zfp352 protein_coding protein_coding MGP_CBAJ_T0065895.1 MGP_CBAJ_G0028107.1 mouse_genomes_project 4 96501445 96503101 + MGP_CBAJ_P0065895 Zfp352 protein_coding protein_coding MGP_CBAJ_T0068476.1 MGP_CBAJ_G0028677.1 mouse_genomes_project 4 151459899 151467127 - Mrto4 protein_coding processed_transcript MGP_CBAJ_T0068477.1 MGP_CBAJ_G0028677.1 mouse_genomes_project 4 151459899 151470073 - MGP_CBAJ_P0068477 Mrto4 protein_coding protein_coding MGP_CBAJ_T0068478.1 MGP_CBAJ_G0028677.1 mouse_genomes_project 4 151459909 151469795 - MGP_CBAJ_P0068478 Mrto4 protein_coding protein_coding MGP_CBAJ_T0068479.1 MGP_CBAJ_G0028677.1 mouse_genomes_project 4 151460626 151467145 - Mrto4 protein_coding retained_intron MGP_CBAJ_T0068480.1 MGP_CBAJ_G0028677.1 mouse_genomes_project 4 151465892 151469793 - MGP_CBAJ_P0068480 Mrto4 protein_coding unknown_likely_coding MGP_CBAJ_T0068481.1 MGP_CBAJ_G0028677.1 mouse_genomes_project 4 151466238 151469808 - MGP_CBAJ_P0068481 Mrto4 protein_coding protein_coding MGP_CBAJ_T0068482.1 MGP_CBAJ_G0028677.1 mouse_genomes_project 4 151466300 151470030 - Mrto4 protein_coding retained_intron MGP_CBAJ_T0068483.1 MGP_CBAJ_G0028677.1 mouse_genomes_project 4 151467398 151469807 - Mrto4 protein_coding retained_intron MGP_CBAJ_T0066090.1 MGP_CBAJ_G0028153.1 mouse_genomes_project 4 108498024 108584695 + MGP_CBAJ_P0066090 Raver2 protein_coding protein_coding MGP_CBAJ_T0066091.1 MGP_CBAJ_G0028153.1 mouse_genomes_project 4 108498024 108567683 + MGP_CBAJ_P0066091 Raver2 protein_coding protein_coding MGP_CBAJ_T0066092.1 MGP_CBAJ_G0028153.1 mouse_genomes_project 4 108498520 108534346 + Raver2 protein_coding processed_transcript MGP_CBAJ_T0068792.1 MGP_CBAJ_G0028779.1 mouse_genomes_project 4 161770477 161788815 + MGP_CBAJ_P0068792 Mthfr protein_coding protein_coding MGP_CBAJ_T0068793.1 MGP_CBAJ_G0028779.1 mouse_genomes_project 4 161770559 161777217 + MGP_CBAJ_P0068793 Mthfr protein_coding protein_coding MGP_CBAJ_T0068794.1 MGP_CBAJ_G0028779.1 mouse_genomes_project 4 161772206 161776110 + Mthfr protein_coding retained_intron MGP_CBAJ_T0068795.1 MGP_CBAJ_G0028779.1 mouse_genomes_project 4 161772590 161792160 + MGP_CBAJ_P0068795 Mthfr protein_coding protein_coding MGP_CBAJ_T0068796.1 MGP_CBAJ_G0028779.1 mouse_genomes_project 4 161772686 161792160 + MGP_CBAJ_P0068796 Mthfr protein_coding nonsense_mediated_decay MGP_CBAJ_T0068797.1 MGP_CBAJ_G0028779.1 mouse_genomes_project 4 161773001 161776618 + Mthfr protein_coding retained_intron MGP_CBAJ_T0068798.1 MGP_CBAJ_G0028779.1 mouse_genomes_project 4 161785327 161792157 + MGP_CBAJ_P0068798 Mthfr protein_coding nonsense_mediated_decay MGP_CBAJ_T0064297.1 MGP_CBAJ_G0027725.1 mouse_genomes_project 4 8526291 8577479 - MGP_CBAJ_P0064297 Dpy19l4 protein_coding protein_coding MGP_CBAJ_T0064298.1 MGP_CBAJ_G0027725.1 mouse_genomes_project 4 8526291 8599072 - MGP_CBAJ_P0064298 Dpy19l4 protein_coding protein_coding MGP_CBAJ_T0064299.1 MGP_CBAJ_G0027725.1 mouse_genomes_project 4 8544433 8599072 - MGP_CBAJ_P0064299 Dpy19l4 protein_coding protein_coding MGP_CBAJ_T0064300.1 MGP_CBAJ_G0027725.1 mouse_genomes_project 4 8547536 8599010 - MGP_CBAJ_P0064300 Dpy19l4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0064301.1 MGP_CBAJ_G0027725.1 mouse_genomes_project 4 8577540 8598982 - Dpy19l4 protein_coding processed_transcript MGP_CBAJ_T0064302.1 MGP_CBAJ_G0027725.1 mouse_genomes_project 4 8594025 8599035 - Dpy19l4 protein_coding processed_transcript MGP_CBAJ_T0100555.1 MGP_CBAJ_G0038810.1 mouse_genomes_project 4 84356551 84356674 - Gm25836 snoRNA snoRNA MGP_CBAJ_T0065981.1 MGP_CBAJ_G0028127.1 mouse_genomes_project 4 103345319 103385867 - MGP_CBAJ_P0065981 Cyp2j6 protein_coding protein_coding MGP_CBAJ_T0074441.1 MGP_CBAJ_G0029826.1 mouse_genomes_project 5 149955144 149990681 - MGP_CBAJ_P0074441 Limk1 protein_coding protein_coding MGP_CBAJ_T0074442.1 MGP_CBAJ_G0029826.1 mouse_genomes_project 5 149955145 149980311 - MGP_CBAJ_P0074442 Limk1 protein_coding protein_coding MGP_CBAJ_T0074443.1 MGP_CBAJ_G0029826.1 mouse_genomes_project 5 149955304 149980283 - MGP_CBAJ_P0074443 Limk1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074444.1 MGP_CBAJ_G0029826.1 mouse_genomes_project 5 149959094 149966268 - MGP_CBAJ_P0074444 Limk1 protein_coding protein_coding MGP_CBAJ_T0074445.1 MGP_CBAJ_G0029826.1 mouse_genomes_project 5 149966006 149970482 - Limk1 protein_coding retained_intron MGP_CBAJ_T0074446.1 MGP_CBAJ_G0029826.1 mouse_genomes_project 5 149970235 149990657 - Limk1 protein_coding retained_intron MGP_CBAJ_T0004809.1 MGP_CBAJ_G0004128.1 mouse_genomes_project 5 167118705 167124289 - antisense antisense MGP_CBAJ_T0071828.1 MGP_CBAJ_G0029312.1 mouse_genomes_project 5 82148429 82173054 - MGP_CBAJ_P0071828 Pdcl2 protein_coding protein_coding MGP_CBAJ_T0071829.1 MGP_CBAJ_G0029312.1 mouse_genomes_project 5 82148441 82173077 - MGP_CBAJ_P0071829 Pdcl2 protein_coding protein_coding MGP_CBAJ_T0014876.1 MGP_CBAJ_G0012988.1 mouse_genomes_project 5 115935911 115936363 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014939.1 MGP_CBAJ_G0013051.1 mouse_genomes_project 5 150369539 150369711 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014817.1 MGP_CBAJ_G0012929.1 mouse_genomes_project 5 83233579 83234152 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0072300.1 MGP_CBAJ_G0029426.1 mouse_genomes_project 5 101416372 101420475 - MGP_CBAJ_P0072300 Sowahb protein_coding protein_coding MGP_CBAJ_T0071080.1 MGP_CBAJ_G0029184.1 mouse_genomes_project 5 43279360 43367251 - MGP_CBAJ_P0071080 Rab28 protein_coding protein_coding MGP_CBAJ_T0071081.1 MGP_CBAJ_G0029184.1 mouse_genomes_project 5 43279360 43367284 - MGP_CBAJ_P0071081 Rab28 protein_coding protein_coding MGP_CBAJ_T0071082.1 MGP_CBAJ_G0029184.1 mouse_genomes_project 5 43279361 43367287 - MGP_CBAJ_P0071082 Rab28 protein_coding protein_coding MGP_CBAJ_T0071083.1 MGP_CBAJ_G0029184.1 mouse_genomes_project 5 43280117 43281887 - Rab28 protein_coding retained_intron MGP_CBAJ_T0071084.1 MGP_CBAJ_G0029184.1 mouse_genomes_project 5 43280611 43283502 - Rab28 protein_coding retained_intron MGP_CBAJ_T0001530.1 MGP_CBAJ_G0001450.1 mouse_genomes_project 5 51399488 51400316 - TEC TEC MGP_CBAJ_T0069862.1 MGP_CBAJ_G0028974.1 mouse_genomes_project 5 19987032 19991712 + MGP_CBAJ_P0069862 Tmem60 protein_coding protein_coding MGP_CBAJ_T0069863.1 MGP_CBAJ_G0028974.1 mouse_genomes_project 5 19987348 19989526 + Tmem60 protein_coding processed_transcript MGP_CBAJ_T0010585.1 MGP_CBAJ_G0008723.1 mouse_genomes_project 5 127832805 127832865 + Mir7030 miRNA miRNA MGP_CBAJ_T0070910.1 MGP_CBAJ_G0029153.1 mouse_genomes_project 5 37101438 37512910 - MGP_CBAJ_P0070910 Sorcs2 protein_coding protein_coding MGP_CBAJ_T0070911.1 MGP_CBAJ_G0029153.1 mouse_genomes_project 5 37145375 37512893 - Sorcs2 protein_coding retained_intron MGP_CBAJ_T0070912.1 MGP_CBAJ_G0029153.1 mouse_genomes_project 5 37149666 37366563 - MGP_CBAJ_P0070912 Sorcs2 protein_coding protein_coding MGP_CBAJ_T0070913.1 MGP_CBAJ_G0029153.1 mouse_genomes_project 5 37241049 37512925 - MGP_CBAJ_P0070913 Sorcs2 protein_coding protein_coding MGP_CBAJ_T0070914.1 MGP_CBAJ_G0029153.1 mouse_genomes_project 5 37242079 37478718 - Sorcs2 protein_coding processed_transcript MGP_CBAJ_T0004737.1 MGP_CBAJ_G0004079.1 mouse_genomes_project 5 135579632 135590400 + Gm15637 antisense antisense MGP_CBAJ_T0004559.1 MGP_CBAJ_G0003947.1 mouse_genomes_project 5 21622187 21623864 + Gm16110 antisense antisense MGP_CBAJ_T0070825.1 MGP_CBAJ_G0029140.1 mouse_genomes_project 5 35921822 36005920 + MGP_CBAJ_P0070825 Rgs12 protein_coding protein_coding MGP_CBAJ_T0070826.1 MGP_CBAJ_G0029140.1 mouse_genomes_project 5 35921825 35992420 + Rgs12 protein_coding retained_intron MGP_CBAJ_T0070827.1 MGP_CBAJ_G0029140.1 mouse_genomes_project 5 35937151 36017510 + MGP_CBAJ_P0070827 Rgs12 protein_coding protein_coding MGP_CBAJ_T0070828.1 MGP_CBAJ_G0029140.1 mouse_genomes_project 5 35946192 35947657 + Rgs12 protein_coding processed_transcript MGP_CBAJ_T0070829.1 MGP_CBAJ_G0029140.1 mouse_genomes_project 5 35947367 35991831 + Rgs12 protein_coding processed_transcript MGP_CBAJ_T0070830.1 MGP_CBAJ_G0029140.1 mouse_genomes_project 5 35961459 35995497 + MGP_CBAJ_P0070830 Rgs12 protein_coding protein_coding MGP_CBAJ_T0070831.1 MGP_CBAJ_G0029140.1 mouse_genomes_project 5 35961880 36017501 + MGP_CBAJ_P0070831 Rgs12 protein_coding protein_coding MGP_CBAJ_T0070832.1 MGP_CBAJ_G0029140.1 mouse_genomes_project 5 35962146 36005778 + MGP_CBAJ_P0070832 Rgs12 protein_coding protein_coding MGP_CBAJ_T0070833.1 MGP_CBAJ_G0029140.1 mouse_genomes_project 5 35971388 36005916 + MGP_CBAJ_P0070833 Rgs12 protein_coding protein_coding MGP_CBAJ_T0070834.1 MGP_CBAJ_G0029140.1 mouse_genomes_project 5 35971515 36017501 + MGP_CBAJ_P0070834 Rgs12 protein_coding protein_coding MGP_CBAJ_T0070835.1 MGP_CBAJ_G0029140.1 mouse_genomes_project 5 35992437 35994987 + Rgs12 protein_coding retained_intron MGP_CBAJ_T0070837.1 MGP_CBAJ_G0029140.1 mouse_genomes_project 5 35995155 35996661 + Rgs12 protein_coding retained_intron MGP_CBAJ_T0070838.1 MGP_CBAJ_G0029140.1 mouse_genomes_project 5 35996665 36002415 + MGP_CBAJ_P0070838 Rgs12 protein_coding protein_coding MGP_CBAJ_T0070839.1 MGP_CBAJ_G0029140.1 mouse_genomes_project 5 35999227 36004377 + Rgs12 protein_coding processed_transcript MGP_CBAJ_T0070840.1 MGP_CBAJ_G0029140.1 mouse_genomes_project 5 35999294 36017502 + MGP_CBAJ_P0070840 Rgs12 protein_coding protein_coding MGP_CBAJ_T0075307.1 MGP_CBAJ_G0030004.1 mouse_genomes_project 5 160987447 161026654 + MGP_CBAJ_P0075307 Eif2ak1 protein_coding protein_coding MGP_CBAJ_T0075308.1 MGP_CBAJ_G0030004.1 mouse_genomes_project 5 160987490 161001173 + Eif2ak1 protein_coding retained_intron MGP_CBAJ_T0075309.1 MGP_CBAJ_G0030004.1 mouse_genomes_project 5 160987606 160994914 + Eif2ak1 protein_coding retained_intron MGP_CBAJ_T0014667.1 MGP_CBAJ_G0012779.1 mouse_genomes_project 5 20422551 20422903 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014707.1 MGP_CBAJ_G0012819.1 mouse_genomes_project 5 29990260 29990948 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014681.1 MGP_CBAJ_G0012793.1 mouse_genomes_project 5 22299857 22300438 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008188.1 MGP_CBAJ_G0006654.1 mouse_genomes_project 5 123677984 123686717 + Gm42491 lincRNA lincRNA MGP_CBAJ_T0072089.1 MGP_CBAJ_G0029378.1 mouse_genomes_project 5 96308968 96400641 + MGP_CBAJ_P0072089 Rufy3 protein_coding protein_coding MGP_CBAJ_T0072090.1 MGP_CBAJ_G0029378.1 mouse_genomes_project 5 96308968 96409532 + MGP_CBAJ_P0072090 Rufy3 protein_coding protein_coding MGP_CBAJ_T0072091.1 MGP_CBAJ_G0029378.1 mouse_genomes_project 5 96334809 96398873 + MGP_CBAJ_P0072091 Rufy3 protein_coding protein_coding MGP_CBAJ_T0072092.1 MGP_CBAJ_G0029378.1 mouse_genomes_project 5 96334832 96400642 + MGP_CBAJ_P0072092 Rufy3 protein_coding protein_coding MGP_CBAJ_T0072093.1 MGP_CBAJ_G0029378.1 mouse_genomes_project 5 96334873 96337209 + Rufy3 protein_coding retained_intron MGP_CBAJ_T0072094.1 MGP_CBAJ_G0029378.1 mouse_genomes_project 5 96334874 96367165 + Rufy3 protein_coding retained_intron MGP_CBAJ_T0072095.1 MGP_CBAJ_G0029378.1 mouse_genomes_project 5 96335090 96398874 + MGP_CBAJ_P0072095 Rufy3 protein_coding protein_coding MGP_CBAJ_T0072096.1 MGP_CBAJ_G0029378.1 mouse_genomes_project 5 96404636 96406264 + Rufy3 protein_coding retained_intron MGP_CBAJ_T0099353.1 MGP_CBAJ_G0037608.1 mouse_genomes_project 5 70814881 70814988 - Gm22929 snRNA snRNA MGP_CBAJ_T0010601.1 MGP_CBAJ_G0008739.1 mouse_genomes_project 5 151972429 151972517 - Mir721 miRNA miRNA MGP_CBAJ_T0073179.1 MGP_CBAJ_G0029607.1 mouse_genomes_project 5 126692557 126741269 - MGP_CBAJ_P0073179 Git2 protein_coding protein_coding MGP_CBAJ_T0073180.1 MGP_CBAJ_G0029607.1 mouse_genomes_project 5 126692558 126741266 - MGP_CBAJ_P0073180 Git2 protein_coding protein_coding MGP_CBAJ_T0073181.1 MGP_CBAJ_G0029607.1 mouse_genomes_project 5 126692561 126741208 - MGP_CBAJ_P0073181 Git2 protein_coding protein_coding MGP_CBAJ_T0073182.1 MGP_CBAJ_G0029607.1 mouse_genomes_project 5 126692561 126741266 - MGP_CBAJ_P0073182 Git2 protein_coding protein_coding MGP_CBAJ_T0073183.1 MGP_CBAJ_G0029607.1 mouse_genomes_project 5 126692561 126711652 - MGP_CBAJ_P0073183 Git2 protein_coding protein_coding MGP_CBAJ_T0073184.1 MGP_CBAJ_G0029607.1 mouse_genomes_project 5 126697563 126741236 - MGP_CBAJ_P0073184 Git2 protein_coding protein_coding MGP_CBAJ_T0073185.1 MGP_CBAJ_G0029607.1 mouse_genomes_project 5 126697858 126741269 - MGP_CBAJ_P0073185 Git2 protein_coding protein_coding MGP_CBAJ_T0073186.1 MGP_CBAJ_G0029607.1 mouse_genomes_project 5 126701216 126702167 - Git2 protein_coding processed_transcript MGP_CBAJ_T0073187.1 MGP_CBAJ_G0029607.1 mouse_genomes_project 5 126701864 126716051 - MGP_CBAJ_P0073187 Git2 protein_coding protein_coding MGP_CBAJ_T0073188.1 MGP_CBAJ_G0029607.1 mouse_genomes_project 5 126706168 126709146 - Git2 protein_coding retained_intron MGP_CBAJ_T0073189.1 MGP_CBAJ_G0029607.1 mouse_genomes_project 5 126715101 126741269 - Git2 protein_coding retained_intron MGP_CBAJ_T0073190.1 MGP_CBAJ_G0029607.1 mouse_genomes_project 5 126715988 126734305 - MGP_CBAJ_P0073190 Git2 protein_coding protein_coding MGP_CBAJ_T0073191.1 MGP_CBAJ_G0029607.1 mouse_genomes_project 5 126722039 126729477 - Git2 protein_coding retained_intron MGP_CBAJ_T0073192.1 MGP_CBAJ_G0029607.1 mouse_genomes_project 5 126732130 126743345 - MGP_CBAJ_P0073192 Git2 protein_coding protein_coding MGP_CBAJ_T0073193.1 MGP_CBAJ_G0029607.1 mouse_genomes_project 5 126732234 126741269 - Git2 protein_coding processed_transcript MGP_CBAJ_T0073194.1 MGP_CBAJ_G0029607.1 mouse_genomes_project 5 126732321 126734934 - Git2 protein_coding processed_transcript MGP_CBAJ_T0073195.1 MGP_CBAJ_G0029607.1 mouse_genomes_project 5 126733456 126741241 - Git2 protein_coding retained_intron MGP_CBAJ_T0008231.1 MGP_CBAJ_G0006682.1 mouse_genomes_project 5 131718752 131727609 + 4930413E15Rik lincRNA lincRNA MGP_CBAJ_T0072245.1 MGP_CBAJ_G0029418.1 mouse_genomes_project 5 100601364 100668178 + MGP_CBAJ_P0072245 Art3 protein_coding protein_coding MGP_CBAJ_T0072246.1 MGP_CBAJ_G0029418.1 mouse_genomes_project 5 100601367 100668375 + MGP_CBAJ_P0072246 Art3 protein_coding protein_coding MGP_CBAJ_T0072247.1 MGP_CBAJ_G0029418.1 mouse_genomes_project 5 100601378 100616334 + Art3 protein_coding processed_transcript MGP_CBAJ_T0072248.1 MGP_CBAJ_G0029418.1 mouse_genomes_project 5 100601378 100693811 + MGP_CBAJ_P0072248 Art3 protein_coding protein_coding MGP_CBAJ_T0072249.1 MGP_CBAJ_G0029418.1 mouse_genomes_project 5 100601378 100693808 + MGP_CBAJ_P0072249 Art3 protein_coding protein_coding MGP_CBAJ_T0072254.1 MGP_CBAJ_G0029418.1 mouse_genomes_project 5 100650170 100668290 + MGP_CBAJ_P0072254 Art3 protein_coding protein_coding MGP_CBAJ_T0072255.1 MGP_CBAJ_G0029418.1 mouse_genomes_project 5 100662128 100668261 + MGP_CBAJ_P0072255 Art3 protein_coding protein_coding MGP_CBAJ_T0072256.1 MGP_CBAJ_G0029418.1 mouse_genomes_project 5 100663004 100667969 + MGP_CBAJ_P0072256 Art3 protein_coding protein_coding MGP_CBAJ_T0072257.1 MGP_CBAJ_G0029418.1 mouse_genomes_project 5 100663087 100667839 + MGP_CBAJ_P0072257 Art3 protein_coding protein_coding MGP_CBAJ_T0072258.1 MGP_CBAJ_G0029418.1 mouse_genomes_project 5 100663092 100668220 + MGP_CBAJ_P0072258 Art3 protein_coding protein_coding MGP_CBAJ_T0072259.1 MGP_CBAJ_G0029418.1 mouse_genomes_project 5 100663384 100693805 + Art3 protein_coding processed_transcript MGP_CBAJ_T0072260.1 MGP_CBAJ_G0029418.1 mouse_genomes_project 5 100663384 100693805 + MGP_CBAJ_P0072260 Art3 protein_coding protein_coding MGP_CBAJ_T0072261.1 MGP_CBAJ_G0029418.1 mouse_genomes_project 5 100663384 100693805 + MGP_CBAJ_P0072261 Art3 protein_coding protein_coding MGP_CBAJ_T0072262.1 MGP_CBAJ_G0029418.1 mouse_genomes_project 5 100663384 100693805 + MGP_CBAJ_P0072262 Art3 protein_coding protein_coding MGP_CBAJ_T0072263.1 MGP_CBAJ_G0029418.1 mouse_genomes_project 5 100663384 100693805 + MGP_CBAJ_P0072263 Art3 protein_coding protein_coding MGP_CBAJ_T0072264.1 MGP_CBAJ_G0029418.1 mouse_genomes_project 5 100663384 100693806 + MGP_CBAJ_P0072264 Art3 protein_coding protein_coding MGP_CBAJ_T0072265.1 MGP_CBAJ_G0029418.1 mouse_genomes_project 5 100667828 100693805 + MGP_CBAJ_P0072265 Art3 protein_coding protein_coding MGP_CBAJ_T0072266.1 MGP_CBAJ_G0029418.1 mouse_genomes_project 5 100668302 100693806 + MGP_CBAJ_P0072266 Art3 protein_coding protein_coding MGP_CBAJ_T0072267.1 MGP_CBAJ_G0029418.1 mouse_genomes_project 5 100676814 100693630 + MGP_CBAJ_P0072267 Art3 protein_coding protein_coding MGP_CBAJ_T0017950.1 MGP_CBAJ_G0015359.1 mouse_genomes_project 5 167176546 167196691 - Gm15411 processed_transcript lincRNA MGP_CBAJ_T0017951.1 MGP_CBAJ_G0015359.1 mouse_genomes_project 5 167179211 167196662 - Gm15411 processed_transcript lincRNA MGP_CBAJ_T0017952.1 MGP_CBAJ_G0015359.1 mouse_genomes_project 5 167194669 167196691 - Gm15411 processed_transcript retained_intron MGP_CBAJ_T0075471.1 MGP_CBAJ_G0030047.1 mouse_genomes_project 5 163832866 163835999 - MGP_CBAJ_P0075471 1700001J03Rik protein_coding protein_coding MGP_CBAJ_T0075472.1 MGP_CBAJ_G0030047.1 mouse_genomes_project 5 163832875 163834721 - 1700001J03Rik protein_coding retained_intron MGP_CBAJ_T0100616.1 MGP_CBAJ_G0038871.1 mouse_genomes_project 5 73469158 73469285 - Gm23605 snoRNA snoRNA MGP_CBAJ_T0070183.1 MGP_CBAJ_G0029040.1 mouse_genomes_project 5 29299053 29488624 - MGP_CBAJ_P0070183 Lmbr1 protein_coding protein_coding MGP_CBAJ_T0070184.1 MGP_CBAJ_G0029040.1 mouse_genomes_project 5 29299065 29488630 - MGP_CBAJ_P0070184 Lmbr1 protein_coding protein_coding MGP_CBAJ_T0070185.1 MGP_CBAJ_G0029040.1 mouse_genomes_project 5 29301370 29488542 - MGP_CBAJ_P0070185 Lmbr1 protein_coding protein_coding MGP_CBAJ_T0070186.1 MGP_CBAJ_G0029040.1 mouse_genomes_project 5 29301624 29488624 - MGP_CBAJ_P0070186 Lmbr1 protein_coding protein_coding MGP_CBAJ_T0070187.1 MGP_CBAJ_G0029040.1 mouse_genomes_project 5 29302092 29488570 - MGP_CBAJ_P0070187 Lmbr1 protein_coding protein_coding MGP_CBAJ_T0070188.1 MGP_CBAJ_G0029040.1 mouse_genomes_project 5 29304269 29385202 - MGP_CBAJ_P0070188 Lmbr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070189.1 MGP_CBAJ_G0029040.1 mouse_genomes_project 5 29344543 29472604 - Lmbr1 protein_coding processed_transcript MGP_CBAJ_T0004678.1 MGP_CBAJ_G0004036.1 mouse_genomes_project 5 113938814 113945608 + Gm26703 antisense antisense MGP_CBAJ_T0004679.1 MGP_CBAJ_G0004036.1 mouse_genomes_project 5 113938887 113940523 + Gm26703 antisense antisense MGP_CBAJ_T0004680.1 MGP_CBAJ_G0004036.1 mouse_genomes_project 5 113943480 113949239 + Gm26703 antisense antisense MGP_CBAJ_T0073670.1 MGP_CBAJ_G0029704.1 mouse_genomes_project 5 135652054 135657958 + MGP_CBAJ_P0073670 Myl2 protein_coding protein_coding MGP_CBAJ_T0073671.1 MGP_CBAJ_G0029704.1 mouse_genomes_project 5 135652060 135656397 + MGP_CBAJ_P0073671 Myl2 protein_coding protein_coding MGP_CBAJ_T0073672.1 MGP_CBAJ_G0029704.1 mouse_genomes_project 5 135652083 135656009 + MGP_CBAJ_P0073672 Myl2 protein_coding protein_coding MGP_CBAJ_T0073673.1 MGP_CBAJ_G0029704.1 mouse_genomes_project 5 135652086 135664580 + MGP_CBAJ_P0073673 Myl2 protein_coding protein_coding MGP_CBAJ_T0073674.1 MGP_CBAJ_G0029704.1 mouse_genomes_project 5 135652135 135656140 + MGP_CBAJ_P0073674 Myl2 protein_coding protein_coding MGP_CBAJ_T0073675.1 MGP_CBAJ_G0029704.1 mouse_genomes_project 5 135652264 135653857 + Myl2 protein_coding processed_transcript MGP_CBAJ_T0073676.1 MGP_CBAJ_G0029704.1 mouse_genomes_project 5 135652488 135655992 + MGP_CBAJ_P0073676 Myl2 protein_coding protein_coding MGP_CBAJ_T0073677.1 MGP_CBAJ_G0029704.1 mouse_genomes_project 5 135652683 135655032 + MGP_CBAJ_P0073677 Myl2 protein_coding protein_coding MGP_CBAJ_T0073678.1 MGP_CBAJ_G0029704.1 mouse_genomes_project 5 135652900 135655810 + MGP_CBAJ_P0073678 Myl2 protein_coding protein_coding MGP_CBAJ_T0073679.1 MGP_CBAJ_G0029704.1 mouse_genomes_project 5 135654282 135657952 + Myl2 protein_coding processed_transcript MGP_CBAJ_T0073680.1 MGP_CBAJ_G0029704.1 mouse_genomes_project 5 135654284 135657958 + Myl2 protein_coding processed_transcript MGP_CBAJ_T0073681.1 MGP_CBAJ_G0029704.1 mouse_genomes_project 5 135655016 135656107 + MGP_CBAJ_P0073681 Myl2 protein_coding protein_coding MGP_CBAJ_T0001536.1 MGP_CBAJ_G0001456.1 mouse_genomes_project 5 51479209 51479841 - TEC TEC MGP_CBAJ_T0008159.1 MGP_CBAJ_G0006639.1 mouse_genomes_project 5 118880686 118881624 - Gm42518 lincRNA lincRNA MGP_CBAJ_T0100628.1 MGP_CBAJ_G0038883.1 mouse_genomes_project 5 108915428 108915560 + Gm25969 snoRNA snoRNA MGP_CBAJ_T0014628.1 MGP_CBAJ_G0012740.1 mouse_genomes_project 5 1004915 1006624 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0070853.1 MGP_CBAJ_G0029143.1 mouse_genomes_project 5 36071806 36088083 - MGP_CBAJ_P0070853 Lrpap1 protein_coding protein_coding MGP_CBAJ_T0070854.1 MGP_CBAJ_G0029143.1 mouse_genomes_project 5 36073374 36084831 - MGP_CBAJ_P0070854 Lrpap1 protein_coding protein_coding MGP_CBAJ_T0070855.1 MGP_CBAJ_G0029143.1 mouse_genomes_project 5 36073600 36088006 - Lrpap1 protein_coding retained_intron MGP_CBAJ_T0070856.1 MGP_CBAJ_G0029143.1 mouse_genomes_project 5 36084444 36088013 - Lrpap1 protein_coding retained_intron MGP_CBAJ_T0070857.1 MGP_CBAJ_G0029143.1 mouse_genomes_project 5 36084825 36086857 - Lrpap1 protein_coding processed_transcript MGP_CBAJ_T0070074.1 MGP_CBAJ_G0029014.1 mouse_genomes_project 5 24191430 24207547 - MGP_CBAJ_P0070074 Abcf2 protein_coding protein_coding MGP_CBAJ_T0008067.1 MGP_CBAJ_G0006567.1 mouse_genomes_project 5 80846228 80893886 + Gm19583 lincRNA lincRNA MGP_CBAJ_T0098499.1 MGP_CBAJ_G0036755.1 mouse_genomes_project 5 137378244 137383883 + Gm15751 sense_overlapping sense_overlapping MGP_CBAJ_T0071102.1 MGP_CBAJ_G0029192.1 mouse_genomes_project 5 45485653 45585083 + MGP_CBAJ_P0071102 Cc2d2a protein_coding protein_coding MGP_CBAJ_T0071103.1 MGP_CBAJ_G0029192.1 mouse_genomes_project 5 45498574 45515325 + Cc2d2a protein_coding retained_intron MGP_CBAJ_T0071104.1 MGP_CBAJ_G0029192.1 mouse_genomes_project 5 45498574 45583428 + MGP_CBAJ_P0071104 Cc2d2a protein_coding protein_coding MGP_CBAJ_T0071105.1 MGP_CBAJ_G0029192.1 mouse_genomes_project 5 45529349 45553890 + Cc2d2a protein_coding retained_intron MGP_CBAJ_T0071106.1 MGP_CBAJ_G0029193.1 mouse_genomes_project 5 45588725 45631901 - MGP_CBAJ_P0071106 Fbxl5 protein_coding protein_coding MGP_CBAJ_T0071107.1 MGP_CBAJ_G0029193.1 mouse_genomes_project 5 45588726 45631908 - MGP_CBAJ_P0071107 Fbxl5 protein_coding protein_coding MGP_CBAJ_T0071108.1 MGP_CBAJ_G0029193.1 mouse_genomes_project 5 45588726 45620287 - MGP_CBAJ_P0071108 Fbxl5 protein_coding protein_coding MGP_CBAJ_T0071109.1 MGP_CBAJ_G0029193.1 mouse_genomes_project 5 45588726 45631867 - MGP_CBAJ_P0071109 Fbxl5 protein_coding protein_coding MGP_CBAJ_T0071110.1 MGP_CBAJ_G0029193.1 mouse_genomes_project 5 45588734 45684722 - MGP_CBAJ_P0071110 Fbxl5 protein_coding protein_coding MGP_CBAJ_T0071111.1 MGP_CBAJ_G0029193.1 mouse_genomes_project 5 45594716 45631860 - MGP_CBAJ_P0071111 Fbxl5 protein_coding protein_coding MGP_CBAJ_T0071112.1 MGP_CBAJ_G0029193.1 mouse_genomes_project 5 45600015 45631879 - MGP_CBAJ_P0071112 Fbxl5 protein_coding protein_coding MGP_CBAJ_T0071113.1 MGP_CBAJ_G0029193.1 mouse_genomes_project 5 45601995 45631895 - MGP_CBAJ_P0071113 Fbxl5 protein_coding protein_coding MGP_CBAJ_T0071114.1 MGP_CBAJ_G0029193.1 mouse_genomes_project 5 45602800 45603995 - Fbxl5 protein_coding retained_intron MGP_CBAJ_T0071115.1 MGP_CBAJ_G0029193.1 mouse_genomes_project 5 45605142 45631860 - Fbxl5 protein_coding retained_intron MGP_CBAJ_T0071116.1 MGP_CBAJ_G0029193.1 mouse_genomes_project 5 45606422 45631876 - Fbxl5 protein_coding retained_intron MGP_CBAJ_T0071117.1 MGP_CBAJ_G0029193.1 mouse_genomes_project 5 45612230 45631858 - MGP_CBAJ_P0071117 Fbxl5 protein_coding protein_coding MGP_CBAJ_T0001848.1 MGP_CBAJ_G0001764.1 mouse_genomes_project 5 152136084 152143019 - TEC TEC MGP_CBAJ_T0075298.1 MGP_CBAJ_G0030002.1 mouse_genomes_project 5 160777805 160782733 + Cyth3 protein_coding retained_intron MGP_CBAJ_T0075299.1 MGP_CBAJ_G0030002.1 mouse_genomes_project 5 160777944 160869789 + MGP_CBAJ_P0075299 Cyth3 protein_coding protein_coding MGP_CBAJ_T0075300.1 MGP_CBAJ_G0030002.1 mouse_genomes_project 5 160789339 160850942 + MGP_CBAJ_P0075300 Cyth3 protein_coding protein_coding MGP_CBAJ_T0075301.1 MGP_CBAJ_G0030002.1 mouse_genomes_project 5 160791622 160850844 + MGP_CBAJ_P0075301 Cyth3 protein_coding protein_coding MGP_CBAJ_T0001705.1 MGP_CBAJ_G0001623.1 mouse_genomes_project 5 115007559 115007927 - TEC TEC MGP_CBAJ_T0001761.1 MGP_CBAJ_G0001679.1 mouse_genomes_project 5 134183119 134185420 - TEC TEC MGP_CBAJ_T0099337.1 MGP_CBAJ_G0037592.1 mouse_genomes_project 5 24047396 24047497 - Gm22333 snRNA snRNA MGP_CBAJ_T0008104.1 MGP_CBAJ_G0006599.1 mouse_genomes_project 5 105880284 105900282 + Gm8013 lincRNA lincRNA MGP_CBAJ_T0073205.1 MGP_CBAJ_G0029612.1 mouse_genomes_project 5 126855800 126891315 + MGP_CBAJ_P0073205 4930519G04Rik protein_coding protein_coding MGP_CBAJ_T0073207.1 MGP_CBAJ_G0029612.1 mouse_genomes_project 5 126865293 126882280 + 4930519G04Rik protein_coding retained_intron MGP_CBAJ_T0073208.1 MGP_CBAJ_G0029612.1 mouse_genomes_project 5 126869076 126885344 + MGP_CBAJ_P0073208 4930519G04Rik protein_coding protein_coding MGP_CBAJ_T0073209.1 MGP_CBAJ_G0029612.1 mouse_genomes_project 5 126871043 126885344 + MGP_CBAJ_P0073209 4930519G04Rik protein_coding protein_coding MGP_CBAJ_T0004720.1 MGP_CBAJ_G0004068.1 mouse_genomes_project 5 130659304 130663658 + Gm9754 antisense antisense MGP_CBAJ_T0072400.1 MGP_CBAJ_G0029451.1 mouse_genomes_project 5 109369629 109372121 - Hnrnpdl protein_coding processed_transcript MGP_CBAJ_T0072401.1 MGP_CBAJ_G0029451.1 mouse_genomes_project 5 109369629 109375298 - MGP_CBAJ_P0072401 Hnrnpdl protein_coding protein_coding MGP_CBAJ_T0072402.1 MGP_CBAJ_G0029451.1 mouse_genomes_project 5 109370773 109374945 - MGP_CBAJ_P0072402 Hnrnpdl protein_coding protein_coding MGP_CBAJ_T0072403.1 MGP_CBAJ_G0029451.1 mouse_genomes_project 5 109370779 109375740 - MGP_CBAJ_P0072403 Hnrnpdl protein_coding nonsense_mediated_decay MGP_CBAJ_T0072404.1 MGP_CBAJ_G0029451.1 mouse_genomes_project 5 109370880 109372778 - Hnrnpdl protein_coding retained_intron MGP_CBAJ_T0072405.1 MGP_CBAJ_G0029451.1 mouse_genomes_project 5 109371478 109374971 - MGP_CBAJ_P0072405 Hnrnpdl protein_coding nonsense_mediated_decay MGP_CBAJ_T0072406.1 MGP_CBAJ_G0029451.1 mouse_genomes_project 5 109372012 109373176 - Hnrnpdl protein_coding retained_intron MGP_CBAJ_T0073426.1 MGP_CBAJ_G0029652.1 mouse_genomes_project 5 129909813 130074850 + Ksr2 protein_coding retained_intron MGP_CBAJ_T0073427.1 MGP_CBAJ_G0029652.1 mouse_genomes_project 5 129910642 130306641 + MGP_CBAJ_P0073427 Ksr2 protein_coding unknown_likely_coding MGP_CBAJ_T0001671.1 MGP_CBAJ_G0001589.1 mouse_genomes_project 5 94795255 94796342 + TEC TEC MGP_CBAJ_T0004708.1 MGP_CBAJ_G0004059.1 mouse_genomes_project 5 127591898 127592477 - 4930430O22Rik antisense antisense MGP_CBAJ_T0004709.1 MGP_CBAJ_G0004059.1 mouse_genomes_project 5 127591900 127592439 - 4930430O22Rik antisense antisense MGP_CBAJ_T0074895.1 MGP_CBAJ_G0029914.1 mouse_genomes_project 5 153937127 153953063 - MGP_CBAJ_P0074895 Gjc3 protein_coding protein_coding MGP_CBAJ_T0074896.1 MGP_CBAJ_G0029914.1 mouse_genomes_project 5 153952476 153953060 - Gjc3 protein_coding retained_intron MGP_CBAJ_T0001650.1 MGP_CBAJ_G0001568.1 mouse_genomes_project 5 78799826 78800345 - TEC TEC MGP_CBAJ_T0098428.1 MGP_CBAJ_G0036692.1 mouse_genomes_project 5 161542501 161545625 + Dmrt1i sense_intronic sense_intronic MGP_CBAJ_T0098429.1 MGP_CBAJ_G0036692.1 mouse_genomes_project 5 161543103 161545582 + Dmrt1i sense_intronic sense_intronic MGP_CBAJ_T0098430.1 MGP_CBAJ_G0036692.1 mouse_genomes_project 5 161543103 161545582 + Dmrt1i sense_intronic sense_intronic MGP_CBAJ_T0072190.1 MGP_CBAJ_G0029405.1 mouse_genomes_project 5 99187226 99196047 + MGP_CBAJ_P0072190 Areg protein_coding protein_coding MGP_CBAJ_T0001517.1 MGP_CBAJ_G0001438.1 mouse_genomes_project 5 50537553 50540130 + TEC TEC MGP_CBAJ_T0072250.1 MGP_CBAJ_G0029419.1 mouse_genomes_project 5 100616201 100618426 - Cxcl10 protein_coding retained_intron MGP_CBAJ_T0072251.1 MGP_CBAJ_G0029419.1 mouse_genomes_project 5 100616201 100618441 - MGP_CBAJ_P0072251 Cxcl10 protein_coding protein_coding MGP_CBAJ_T0072252.1 MGP_CBAJ_G0029419.1 mouse_genomes_project 5 100616368 100618448 - MGP_CBAJ_P0072252 Cxcl10 protein_coding protein_coding MGP_CBAJ_T0072253.1 MGP_CBAJ_G0029419.1 mouse_genomes_project 5 100617559 100618441 - Cxcl10 protein_coding retained_intron MGP_CBAJ_T0072740.1 MGP_CBAJ_G0029519.1 mouse_genomes_project 5 118822289 118862255 + MGP_CBAJ_P0072740 Pigg protein_coding protein_coding MGP_CBAJ_T0072741.1 MGP_CBAJ_G0029519.1 mouse_genomes_project 5 118822289 118863377 + MGP_CBAJ_P0072741 Pigg protein_coding protein_coding MGP_CBAJ_T0072742.1 MGP_CBAJ_G0029519.1 mouse_genomes_project 5 118822316 118862260 + MGP_CBAJ_P0072742 Pigg protein_coding protein_coding MGP_CBAJ_T0014922.1 MGP_CBAJ_G0013034.1 mouse_genomes_project 5 133674366 133674577 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001714.1 MGP_CBAJ_G0001632.1 mouse_genomes_project 5 118821050 118822430 - TEC TEC MGP_CBAJ_T0070768.1 MGP_CBAJ_G0029134.1 mouse_genomes_project 5 35490328 35557084 + MGP_CBAJ_P0070768 Add1 protein_coding protein_coding MGP_CBAJ_T0070769.1 MGP_CBAJ_G0029134.1 mouse_genomes_project 5 35490429 35527526 + MGP_CBAJ_P0070769 Add1 protein_coding protein_coding MGP_CBAJ_T0070770.1 MGP_CBAJ_G0029134.1 mouse_genomes_project 5 35490433 35527526 + MGP_CBAJ_P0070770 Add1 protein_coding protein_coding MGP_CBAJ_T0070771.1 MGP_CBAJ_G0029134.1 mouse_genomes_project 5 35490468 35523258 + Add1 protein_coding processed_transcript MGP_CBAJ_T0070772.1 MGP_CBAJ_G0029134.1 mouse_genomes_project 5 35490527 35557081 + MGP_CBAJ_P0070772 Add1 protein_coding protein_coding MGP_CBAJ_T0070773.1 MGP_CBAJ_G0029134.1 mouse_genomes_project 5 35490537 35557084 + MGP_CBAJ_P0070773 Add1 protein_coding protein_coding MGP_CBAJ_T0070774.1 MGP_CBAJ_G0029134.1 mouse_genomes_project 5 35490706 35557070 + MGP_CBAJ_P0070774 Add1 protein_coding protein_coding MGP_CBAJ_T0070775.1 MGP_CBAJ_G0029134.1 mouse_genomes_project 5 35517973 35520746 + Add1 protein_coding retained_intron MGP_CBAJ_T0070776.1 MGP_CBAJ_G0029134.1 mouse_genomes_project 5 35522974 35555592 + MGP_CBAJ_P0070776 Add1 protein_coding protein_coding MGP_CBAJ_T0070777.1 MGP_CBAJ_G0029134.1 mouse_genomes_project 5 35535884 35550095 + MGP_CBAJ_P0070777 Add1 protein_coding protein_coding MGP_CBAJ_T0070778.1 MGP_CBAJ_G0029134.1 mouse_genomes_project 5 35538260 35542086 + Add1 protein_coding retained_intron MGP_CBAJ_T0070779.1 MGP_CBAJ_G0029134.1 mouse_genomes_project 5 35538401 35555407 + MGP_CBAJ_P0070779 Add1 protein_coding protein_coding MGP_CBAJ_T0070780.1 MGP_CBAJ_G0029134.1 mouse_genomes_project 5 35540988 35557084 + MGP_CBAJ_P0070780 Add1 protein_coding protein_coding MGP_CBAJ_T0070781.1 MGP_CBAJ_G0029134.1 mouse_genomes_project 5 35541483 35555517 + Add1 protein_coding retained_intron MGP_CBAJ_T0070782.1 MGP_CBAJ_G0029134.1 mouse_genomes_project 5 35541605 35553519 + Add1 protein_coding retained_intron MGP_CBAJ_T0070463.1 MGP_CBAJ_G0029087.1 mouse_genomes_project 5 31629176 31630683 + Krtcap3 protein_coding retained_intron MGP_CBAJ_T0070464.1 MGP_CBAJ_G0029087.1 mouse_genomes_project 5 31629191 31630683 + MGP_CBAJ_P0070464 Krtcap3 protein_coding protein_coding MGP_CBAJ_T0070465.1 MGP_CBAJ_G0029087.1 mouse_genomes_project 5 31629201 31630377 + Krtcap3 protein_coding retained_intron MGP_CBAJ_T0070466.1 MGP_CBAJ_G0029087.1 mouse_genomes_project 5 31629207 31630688 + MGP_CBAJ_P0070466 Krtcap3 protein_coding protein_coding MGP_CBAJ_T0070467.1 MGP_CBAJ_G0029087.1 mouse_genomes_project 5 31629210 31630683 + MGP_CBAJ_P0070467 Krtcap3 protein_coding protein_coding MGP_CBAJ_T0070468.1 MGP_CBAJ_G0029087.1 mouse_genomes_project 5 31629247 31630184 + Krtcap3 protein_coding retained_intron MGP_CBAJ_T0070469.1 MGP_CBAJ_G0029087.1 mouse_genomes_project 5 31629412 31630482 + Krtcap3 protein_coding retained_intron MGP_CBAJ_T0070470.1 MGP_CBAJ_G0029087.1 mouse_genomes_project 5 31629821 31630685 + Krtcap3 protein_coding retained_intron MGP_CBAJ_T0070471.1 MGP_CBAJ_G0029087.1 mouse_genomes_project 5 31629965 31630683 + Krtcap3 protein_coding retained_intron MGP_CBAJ_T0070472.1 MGP_CBAJ_G0029087.1 mouse_genomes_project 5 31630040 31630683 + Krtcap3 protein_coding retained_intron MGP_CBAJ_T0008263.1 MGP_CBAJ_G0006703.1 mouse_genomes_project 5 139315352 139357782 - Gm42637 lincRNA lincRNA MGP_CBAJ_T0004551.1 MGP_CBAJ_G0003941.1 mouse_genomes_project 5 12876791 12895953 - Gm26918 antisense antisense MGP_CBAJ_T0008312.1 MGP_CBAJ_G0006732.1 mouse_genomes_project 5 152970973 152988115 + lincRNA lincRNA MGP_CBAJ_T0072015.1 MGP_CBAJ_G0029353.1 mouse_genomes_project 5 94915135 94947187 - MGP_CBAJ_P0072015 protein_coding protein_coding MGP_CBAJ_T0001435.1 MGP_CBAJ_G0001359.1 mouse_genomes_project 5 22834625 22835406 + TEC TEC MGP_CBAJ_T0008325.1 MGP_CBAJ_G0006744.1 mouse_genomes_project 5 160315036 160329341 + lincRNA lincRNA MGP_CBAJ_T0001694.1 MGP_CBAJ_G0001612.1 mouse_genomes_project 5 110351544 110353894 + TEC TEC MGP_CBAJ_T0014741.1 MGP_CBAJ_G0012853.1 mouse_genomes_project 5 46257516 46263973 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004646.1 MGP_CBAJ_G0004018.1 mouse_genomes_project 5 95521482 95524350 + BC051076 antisense antisense MGP_CBAJ_T0004647.1 MGP_CBAJ_G0004018.1 mouse_genomes_project 5 95521482 95524347 + BC051076 antisense antisense MGP_CBAJ_T0075457.1 MGP_CBAJ_G0030038.1 mouse_genomes_project 5 163499570 163571575 - MGP_CBAJ_P0075457 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075459.1 MGP_CBAJ_G0030038.1 mouse_genomes_project 5 163499572 163571565 - MGP_CBAJ_P0075459 protein_coding protein_coding MGP_CBAJ_T0014855.1 MGP_CBAJ_G0012967.1 mouse_genomes_project 5 101576747 101577129 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0075443.1 MGP_CBAJ_G0030031.1 mouse_genomes_project 5 162601568 162617909 + MGP_CBAJ_P0075443 Zfp655 protein_coding protein_coding MGP_CBAJ_T0075444.1 MGP_CBAJ_G0030031.1 mouse_genomes_project 5 162601600 162617908 + MGP_CBAJ_P0075444 Zfp655 protein_coding protein_coding MGP_CBAJ_T0075445.1 MGP_CBAJ_G0030031.1 mouse_genomes_project 5 162601601 162607269 + MGP_CBAJ_P0075445 Zfp655 protein_coding protein_coding MGP_CBAJ_T0075446.1 MGP_CBAJ_G0030031.1 mouse_genomes_project 5 162601602 162607139 + MGP_CBAJ_P0075446 Zfp655 protein_coding protein_coding MGP_CBAJ_T0075447.1 MGP_CBAJ_G0030031.1 mouse_genomes_project 5 162603310 162607103 + MGP_CBAJ_P0075447 Zfp655 protein_coding protein_coding MGP_CBAJ_T0069864.1 MGP_CBAJ_G0028975.1 mouse_genomes_project 5 19998585 20062046 - MGP_CBAJ_P0069864 Rsbn1l protein_coding protein_coding MGP_CBAJ_T0069865.1 MGP_CBAJ_G0028975.1 mouse_genomes_project 5 20001148 20066612 - MGP_CBAJ_P0069865 Rsbn1l protein_coding protein_coding MGP_CBAJ_T0069866.1 MGP_CBAJ_G0028975.1 mouse_genomes_project 5 20025640 20027929 - Rsbn1l protein_coding retained_intron MGP_CBAJ_T0069867.1 MGP_CBAJ_G0028975.1 mouse_genomes_project 5 20025671 20054059 - MGP_CBAJ_P0069867 Rsbn1l protein_coding protein_coding MGP_CBAJ_T0101942.1 MGP_CBAJ_G0039973.1 mouse_genomes_project 5 94824318 94828085 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0072657.1 MGP_CBAJ_G0029504.1 mouse_genomes_project 5 117790725 117874525 + MGP_CBAJ_P0072657 protein_coding unknown_likely_coding MGP_CBAJ_T0072658.1 MGP_CBAJ_G0029504.1 mouse_genomes_project 5 117790756 117856617 + MGP_CBAJ_P0072658 protein_coding protein_coding MGP_CBAJ_T0072659.1 MGP_CBAJ_G0029504.1 mouse_genomes_project 5 117805730 117835146 + protein_coding processed_transcript MGP_CBAJ_T0001709.1 MGP_CBAJ_G0001627.1 mouse_genomes_project 5 117439208 117442808 - TEC TEC MGP_CBAJ_T0071509.1 MGP_CBAJ_G0029257.1 mouse_genomes_project 5 70930150 70974713 + MGP_CBAJ_P0071509 Nsun7 protein_coding protein_coding MGP_CBAJ_T0071510.1 MGP_CBAJ_G0029257.1 mouse_genomes_project 5 70930165 70975677 + MGP_CBAJ_P0071510 Nsun7 protein_coding protein_coding MGP_CBAJ_T0071511.1 MGP_CBAJ_G0029257.1 mouse_genomes_project 5 70930271 70936041 + Nsun7 protein_coding retained_intron MGP_CBAJ_T0071512.1 MGP_CBAJ_G0029257.1 mouse_genomes_project 5 70930565 70975666 + MGP_CBAJ_P0071512 Nsun7 protein_coding protein_coding MGP_CBAJ_T0004596.1 MGP_CBAJ_G0003977.1 mouse_genomes_project 5 45364570 45374031 - Gm15866 antisense antisense MGP_CBAJ_T0004597.1 MGP_CBAJ_G0003977.1 mouse_genomes_project 5 45373546 45428338 - Gm15866 antisense antisense MGP_CBAJ_T0010578.1 MGP_CBAJ_G0008716.1 mouse_genomes_project 5 122015189 122015256 - Mir7026 miRNA miRNA MGP_CBAJ_T0004557.1 MGP_CBAJ_G0003945.1 mouse_genomes_project 5 20061212 20066612 + A630072M18Rik antisense antisense MGP_CBAJ_T0071915.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87614489 88033458 + Adgrl3 protein_coding retained_intron MGP_CBAJ_T0071916.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87614951 88490375 + MGP_CBAJ_P0071916 Adgrl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071917.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87615055 88359374 + Adgrl3 protein_coding retained_intron MGP_CBAJ_T0071918.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87615058 88359371 + Adgrl3 protein_coding retained_intron MGP_CBAJ_T0071919.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87615299 87663262 + Adgrl3 protein_coding retained_intron MGP_CBAJ_T0071920.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87615502 88122993 + Adgrl3 protein_coding retained_intron MGP_CBAJ_T0071921.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87615505 88486719 + MGP_CBAJ_P0071921 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071922.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87615543 88490386 + MGP_CBAJ_P0071922 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071923.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87615896 88490376 + MGP_CBAJ_P0071923 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071924.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87616094 87824663 + Adgrl3 protein_coding processed_transcript MGP_CBAJ_T0071925.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87616095 88490375 + Adgrl3 protein_coding processed_transcript MGP_CBAJ_T0071926.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87616113 88233032 + Adgrl3 protein_coding retained_intron MGP_CBAJ_T0071927.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87948300 88489088 + MGP_CBAJ_P0071927 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071928.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87948301 88489088 + MGP_CBAJ_P0071928 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071929.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87948301 88489088 + MGP_CBAJ_P0071929 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071930.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87948301 88489088 + MGP_CBAJ_P0071930 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071931.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87948301 88489088 + MGP_CBAJ_P0071931 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071932.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87948301 88489088 + MGP_CBAJ_P0071932 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071933.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87948301 88489088 + MGP_CBAJ_P0071933 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071934.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87948301 88489088 + MGP_CBAJ_P0071934 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071935.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87948301 88489088 + MGP_CBAJ_P0071935 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071936.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87948309 87985889 + Adgrl3 protein_coding processed_transcript MGP_CBAJ_T0071937.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87948339 88488957 + MGP_CBAJ_P0071937 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071938.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87948339 88489628 + MGP_CBAJ_P0071938 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071939.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87948339 88488957 + MGP_CBAJ_P0071939 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071940.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87948339 88488957 + MGP_CBAJ_P0071940 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071941.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87948364 88489457 + MGP_CBAJ_P0071941 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071942.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87948452 88490375 + MGP_CBAJ_P0071942 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071943.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 87948452 88490375 + MGP_CBAJ_P0071943 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071944.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 88314748 88359153 + Adgrl3 protein_coding processed_transcript MGP_CBAJ_T0071945.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 88330901 88332018 + Adgrl3 protein_coding retained_intron MGP_CBAJ_T0071946.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 88331260 88490375 + MGP_CBAJ_P0071946 Adgrl3 protein_coding protein_coding MGP_CBAJ_T0071947.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 88401414 88403496 + Adgrl3 protein_coding retained_intron MGP_CBAJ_T0071948.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 88460923 88520680 + Adgrl3 protein_coding processed_transcript MGP_CBAJ_T0071949.1 MGP_CBAJ_G0029329.1 mouse_genomes_project 5 88483003 88487336 + Adgrl3 protein_coding retained_intron MGP_CBAJ_T0071118.1 MGP_CBAJ_G0029194.1 mouse_genomes_project 5 45680200 45689354 + MGP_CBAJ_P0071118 Bst1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071119.1 MGP_CBAJ_G0029194.1 mouse_genomes_project 5 45680206 45702779 + MGP_CBAJ_P0071119 Bst1 protein_coding protein_coding MGP_CBAJ_T0071120.1 MGP_CBAJ_G0029194.1 mouse_genomes_project 5 45684585 45702259 + Bst1 protein_coding retained_intron MGP_CBAJ_T0071121.1 MGP_CBAJ_G0029194.1 mouse_genomes_project 5 45695906 45701203 + Bst1 protein_coding retained_intron MGP_CBAJ_T0074555.1 MGP_CBAJ_G0029851.1 mouse_genomes_project 5 151135034 151202795 + MGP_CBAJ_P0074555 Por protein_coding protein_coding MGP_CBAJ_T0074556.1 MGP_CBAJ_G0029851.1 mouse_genomes_project 5 151139582 151152984 + Por protein_coding processed_transcript MGP_CBAJ_T0074557.1 MGP_CBAJ_G0029851.1 mouse_genomes_project 5 151139586 151202251 + MGP_CBAJ_P0074557 Por protein_coding protein_coding MGP_CBAJ_T0074558.1 MGP_CBAJ_G0029851.1 mouse_genomes_project 5 151157089 151206460 + MGP_CBAJ_P0074558 Por protein_coding protein_coding MGP_CBAJ_T0074559.1 MGP_CBAJ_G0029851.1 mouse_genomes_project 5 151157211 151206460 + MGP_CBAJ_P0074559 Por protein_coding protein_coding MGP_CBAJ_T0074560.1 MGP_CBAJ_G0029851.1 mouse_genomes_project 5 151184441 151203012 + Por protein_coding retained_intron MGP_CBAJ_T0074561.1 MGP_CBAJ_G0029851.1 mouse_genomes_project 5 151196855 151201375 + MGP_CBAJ_P0074561 Por protein_coding protein_coding MGP_CBAJ_T0074562.1 MGP_CBAJ_G0029851.1 mouse_genomes_project 5 151202683 151205049 + Por protein_coding retained_intron MGP_CBAJ_T0074563.1 MGP_CBAJ_G0029851.1 mouse_genomes_project 5 151204314 151205181 + Por protein_coding retained_intron MGP_CBAJ_T0014757.1 MGP_CBAJ_G0012869.1 mouse_genomes_project 5 57706094 57706248 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099390.1 MGP_CBAJ_G0037645.1 mouse_genomes_project 5 127665002 127665143 + Gm24407 snRNA snRNA MGP_CBAJ_T0075302.1 MGP_CBAJ_G0030003.1 mouse_genomes_project 5 160869862 160892154 - MGP_CBAJ_P0075302 Usp42 protein_coding protein_coding MGP_CBAJ_T0075303.1 MGP_CBAJ_G0030003.1 mouse_genomes_project 5 160873289 160875149 - Usp42 protein_coding processed_transcript MGP_CBAJ_T0075304.1 MGP_CBAJ_G0030003.1 mouse_genomes_project 5 160873304 160876742 - Usp42 protein_coding retained_intron MGP_CBAJ_T0075305.1 MGP_CBAJ_G0030003.1 mouse_genomes_project 5 160875958 160887580 - Usp42 protein_coding retained_intron MGP_CBAJ_T0075306.1 MGP_CBAJ_G0030003.1 mouse_genomes_project 5 160881205 160882498 - Usp42 protein_coding retained_intron MGP_CBAJ_T0014811.1 MGP_CBAJ_G0012923.1 mouse_genomes_project 5 81089906 81091296 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001550.1 MGP_CBAJ_G0001470.1 mouse_genomes_project 5 54180226 54183680 - TEC TEC MGP_CBAJ_T0072478.1 MGP_CBAJ_G0029463.1 mouse_genomes_project 5 110313410 110314508 + MGP_CBAJ_P0072478 Agpat9 protein_coding protein_coding MGP_CBAJ_T0072479.1 MGP_CBAJ_G0029463.1 mouse_genomes_project 5 110313827 110366782 + MGP_CBAJ_P0072479 Agpat9 protein_coding protein_coding MGP_CBAJ_T0072480.1 MGP_CBAJ_G0029463.1 mouse_genomes_project 5 110313916 110366782 + MGP_CBAJ_P0072480 Agpat9 protein_coding protein_coding MGP_CBAJ_T0072481.1 MGP_CBAJ_G0029463.1 mouse_genomes_project 5 110314061 110366785 + MGP_CBAJ_P0072481 Agpat9 protein_coding protein_coding MGP_CBAJ_T0072482.1 MGP_CBAJ_G0029463.1 mouse_genomes_project 5 110314114 110314548 + MGP_CBAJ_P0072482 Agpat9 protein_coding protein_coding MGP_CBAJ_T0001794.1 MGP_CBAJ_G0001711.1 mouse_genomes_project 5 141630082 141631164 + TEC TEC MGP_CBAJ_T0014945.1 MGP_CBAJ_G0013057.1 mouse_genomes_project 5 153001247 153003298 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014809.1 MGP_CBAJ_G0012921.1 mouse_genomes_project 5 80844676 80844965 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098421.1 MGP_CBAJ_G0036686.1 mouse_genomes_project 5 146005462 146010153 - Gm43166 sense_intronic sense_intronic MGP_CBAJ_T0072950.1 MGP_CBAJ_G0029561.1 mouse_genomes_project 5 122727928 122779907 + MGP_CBAJ_P0072950 Pitpnb protein_coding protein_coding MGP_CBAJ_T0072951.1 MGP_CBAJ_G0029561.1 mouse_genomes_project 5 122727972 122779907 + MGP_CBAJ_P0072951 Pitpnb protein_coding protein_coding MGP_CBAJ_T0072952.1 MGP_CBAJ_G0029561.1 mouse_genomes_project 5 122727979 122779913 + MGP_CBAJ_P0072952 Pitpnb protein_coding unknown_likely_coding MGP_CBAJ_T0072953.1 MGP_CBAJ_G0029561.1 mouse_genomes_project 5 122743700 122774661 + Pitpnb protein_coding processed_transcript MGP_CBAJ_T0072954.1 MGP_CBAJ_G0029561.1 mouse_genomes_project 5 122771891 122775251 + Pitpnb protein_coding retained_intron MGP_CBAJ_T0075413.1 MGP_CBAJ_G0030025.1 mouse_genomes_project 5 162503186 162510903 + MGP_CBAJ_P0075413 Bud31 protein_coding protein_coding MGP_CBAJ_T0075414.1 MGP_CBAJ_G0030025.1 mouse_genomes_project 5 162503220 162504486 + Bud31 protein_coding retained_intron MGP_CBAJ_T0075415.1 MGP_CBAJ_G0030025.1 mouse_genomes_project 5 162503221 162510899 + MGP_CBAJ_P0075415 Bud31 protein_coding protein_coding MGP_CBAJ_T0075416.1 MGP_CBAJ_G0030025.1 mouse_genomes_project 5 162503232 162510899 + MGP_CBAJ_P0075416 Bud31 protein_coding protein_coding MGP_CBAJ_T0075417.1 MGP_CBAJ_G0030025.1 mouse_genomes_project 5 162503239 162510896 + MGP_CBAJ_P0075417 Bud31 protein_coding protein_coding MGP_CBAJ_T0075418.1 MGP_CBAJ_G0030025.1 mouse_genomes_project 5 162504971 162507773 + Bud31 protein_coding retained_intron MGP_CBAJ_T0075419.1 MGP_CBAJ_G0030025.1 mouse_genomes_project 5 162507629 162510808 + Bud31 protein_coding retained_intron MGP_CBAJ_T0070661.1 MGP_CBAJ_G0029119.1 mouse_genomes_project 5 34521868 34530032 + MGP_CBAJ_P0070661 Fgfr3 protein_coding protein_coding MGP_CBAJ_T0070662.1 MGP_CBAJ_G0029119.1 mouse_genomes_project 5 34521918 34537263 + MGP_CBAJ_P0070662 Fgfr3 protein_coding protein_coding MGP_CBAJ_T0070663.1 MGP_CBAJ_G0029119.1 mouse_genomes_project 5 34521918 34537263 + MGP_CBAJ_P0070663 Fgfr3 protein_coding protein_coding MGP_CBAJ_T0070664.1 MGP_CBAJ_G0029119.1 mouse_genomes_project 5 34521918 34537262 + MGP_CBAJ_P0070664 Fgfr3 protein_coding protein_coding MGP_CBAJ_T0070665.1 MGP_CBAJ_G0029119.1 mouse_genomes_project 5 34521985 34537258 + MGP_CBAJ_P0070665 Fgfr3 protein_coding protein_coding MGP_CBAJ_T0070666.1 MGP_CBAJ_G0029119.1 mouse_genomes_project 5 34521992 34535802 + MGP_CBAJ_P0070666 Fgfr3 protein_coding protein_coding MGP_CBAJ_T0070667.1 MGP_CBAJ_G0029119.1 mouse_genomes_project 5 34522500 34537263 + MGP_CBAJ_P0070667 Fgfr3 protein_coding protein_coding MGP_CBAJ_T0070668.1 MGP_CBAJ_G0029119.1 mouse_genomes_project 5 34522500 34537263 + MGP_CBAJ_P0070668 Fgfr3 protein_coding protein_coding MGP_CBAJ_T0070669.1 MGP_CBAJ_G0029119.1 mouse_genomes_project 5 34522638 34530201 + MGP_CBAJ_P0070669 Fgfr3 protein_coding protein_coding MGP_CBAJ_T0070670.1 MGP_CBAJ_G0029119.1 mouse_genomes_project 5 34523014 34532985 + Fgfr3 protein_coding retained_intron MGP_CBAJ_T0070671.1 MGP_CBAJ_G0029119.1 mouse_genomes_project 5 34523966 34530045 + MGP_CBAJ_P0070671 Fgfr3 protein_coding protein_coding MGP_CBAJ_T0070672.1 MGP_CBAJ_G0029119.1 mouse_genomes_project 5 34529932 34532938 + MGP_CBAJ_P0070672 Fgfr3 protein_coding protein_coding MGP_CBAJ_T0070673.1 MGP_CBAJ_G0029119.1 mouse_genomes_project 5 34530158 34533478 + Fgfr3 protein_coding retained_intron MGP_CBAJ_T0070674.1 MGP_CBAJ_G0029119.1 mouse_genomes_project 5 34530415 34533956 + MGP_CBAJ_P0070674 Fgfr3 protein_coding protein_coding MGP_CBAJ_T0070675.1 MGP_CBAJ_G0029119.1 mouse_genomes_project 5 34533446 34535047 + MGP_CBAJ_P0070675 Fgfr3 protein_coding protein_coding MGP_CBAJ_T0070676.1 MGP_CBAJ_G0029119.1 mouse_genomes_project 5 34533886 34535108 + Fgfr3 protein_coding retained_intron MGP_CBAJ_T0070677.1 MGP_CBAJ_G0029119.1 mouse_genomes_project 5 34534799 34535759 + Fgfr3 protein_coding retained_intron MGP_CBAJ_T0001616.1 MGP_CBAJ_G0001535.1 mouse_genomes_project 5 71134573 71135209 - TEC TEC MGP_CBAJ_T0014897.1 MGP_CBAJ_G0013009.1 mouse_genomes_project 5 120356589 120357173 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001422.1 MGP_CBAJ_G0001346.1 mouse_genomes_project 5 12974360 12978918 + TEC TEC MGP_CBAJ_T0014831.1 MGP_CBAJ_G0012943.1 mouse_genomes_project 5 94533707 94533783 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001776.1 MGP_CBAJ_G0001694.1 mouse_genomes_project 5 136604703 136606278 - TEC TEC MGP_CBAJ_T0014860.1 MGP_CBAJ_G0012972.1 mouse_genomes_project 5 107252853 107253849 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099377.1 MGP_CBAJ_G0037632.1 mouse_genomes_project 5 109250481 109250580 - Gm22838 snRNA snRNA MGP_CBAJ_T0072743.1 MGP_CBAJ_G0029520.1 mouse_genomes_project 5 118905025 118955357 + MGP_CBAJ_P0072743 Pde6b protein_coding protein_coding MGP_CBAJ_T0072744.1 MGP_CBAJ_G0029520.1 mouse_genomes_project 5 118905060 118955281 + Pde6b protein_coding retained_intron MGP_CBAJ_T0072745.1 MGP_CBAJ_G0029520.1 mouse_genomes_project 5 118953989 118956012 + Pde6b protein_coding retained_intron MGP_CBAJ_T0008155.1 MGP_CBAJ_G0006635.1 mouse_genomes_project 5 117340407 117350576 + Gm43419 lincRNA lincRNA MGP_CBAJ_T0070093.1 MGP_CBAJ_G0029018.1 mouse_genomes_project 5 24373763 24400560 - MGP_CBAJ_P0070093 Wdr86 protein_coding protein_coding MGP_CBAJ_T0070094.1 MGP_CBAJ_G0029018.1 mouse_genomes_project 5 24374290 24400513 - Wdr86 protein_coding retained_intron MGP_CBAJ_T0070095.1 MGP_CBAJ_G0029018.1 mouse_genomes_project 5 24374294 24375403 - Wdr86 protein_coding retained_intron MGP_CBAJ_T0070096.1 MGP_CBAJ_G0029018.1 mouse_genomes_project 5 24374663 24377607 - MGP_CBAJ_P0070096 Wdr86 protein_coding protein_coding MGP_CBAJ_T0072652.1 MGP_CBAJ_G0029502.1 mouse_genomes_project 5 117752021 117765673 + MGP_CBAJ_P0072652 Ephx4 protein_coding protein_coding MGP_CBAJ_T0072653.1 MGP_CBAJ_G0029502.1 mouse_genomes_project 5 117752795 117782946 + MGP_CBAJ_P0072653 Ephx4 protein_coding protein_coding MGP_CBAJ_T0072654.1 MGP_CBAJ_G0029502.1 mouse_genomes_project 5 117753074 117765581 + MGP_CBAJ_P0072654 Ephx4 protein_coding protein_coding MGP_CBAJ_T0072655.1 MGP_CBAJ_G0029502.1 mouse_genomes_project 5 117757833 117765641 + MGP_CBAJ_P0072655 Ephx4 protein_coding protein_coding MGP_CBAJ_T0014869.1 MGP_CBAJ_G0012981.1 mouse_genomes_project 5 112074549 112075281 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001824.1 MGP_CBAJ_G0001741.1 mouse_genomes_project 5 146989624 146991859 - TEC TEC MGP_CBAJ_T0099391.1 MGP_CBAJ_G0037646.1 mouse_genomes_project 5 130558718 130558825 - Gm25343 snRNA snRNA MGP_CBAJ_T0008341.1 MGP_CBAJ_G0006758.1 mouse_genomes_project 5 165945373 165954046 - Gm15721 lincRNA lincRNA MGP_CBAJ_T0008037.1 MGP_CBAJ_G0006545.1 mouse_genomes_project 5 63786516 63812790 - 4933402J10Rik lincRNA lincRNA MGP_CBAJ_T0008038.1 MGP_CBAJ_G0006545.1 mouse_genomes_project 5 63786521 63812784 - 4933402J10Rik lincRNA lincRNA MGP_CBAJ_T0001541.1 MGP_CBAJ_G0001461.1 mouse_genomes_project 5 51641990 51644476 - TEC TEC MGP_CBAJ_T0014835.1 MGP_CBAJ_G0012947.1 mouse_genomes_project 5 95238216 95238321 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099385.1 MGP_CBAJ_G0037640.1 mouse_genomes_project 5 122026218 122026325 - Gm22716 snRNA snRNA MGP_CBAJ_T0072863.1 MGP_CBAJ_G0029547.1 mouse_genomes_project 5 121569200 121581467 - MGP_CBAJ_P0072863 Pxmp2 protein_coding protein_coding MGP_CBAJ_T0072864.1 MGP_CBAJ_G0029547.1 mouse_genomes_project 5 121569213 121581302 - MGP_CBAJ_P0072864 Pxmp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072865.1 MGP_CBAJ_G0029547.1 mouse_genomes_project 5 121576072 121581283 - Pxmp2 protein_coding processed_transcript MGP_CBAJ_T0072866.1 MGP_CBAJ_G0029547.1 mouse_genomes_project 5 121578792 121581400 - Pxmp2 protein_coding retained_intron MGP_CBAJ_T0075139.1 MGP_CBAJ_G0029969.1 mouse_genomes_project 5 157296384 157304636 + MGP_CBAJ_P0075139 Lfng protein_coding protein_coding MGP_CBAJ_T0075140.1 MGP_CBAJ_G0029969.1 mouse_genomes_project 5 157300599 157302423 + Lfng protein_coding processed_transcript MGP_CBAJ_T0075141.1 MGP_CBAJ_G0029969.1 mouse_genomes_project 5 157300775 157303765 + Lfng protein_coding retained_intron MGP_CBAJ_T0074062.1 MGP_CBAJ_G0029763.1 mouse_genomes_project 5 138584325 138604587 + MGP_CBAJ_P0074062 Ddx55 protein_coding protein_coding MGP_CBAJ_T0074063.1 MGP_CBAJ_G0029763.1 mouse_genomes_project 5 138584330 138602882 + MGP_CBAJ_P0074063 Ddx55 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074064.1 MGP_CBAJ_G0029763.1 mouse_genomes_project 5 138584357 138595418 + Ddx55 protein_coding processed_transcript MGP_CBAJ_T0074065.1 MGP_CBAJ_G0029763.1 mouse_genomes_project 5 138584375 138604587 + MGP_CBAJ_P0074065 Ddx55 protein_coding protein_coding MGP_CBAJ_T0074066.1 MGP_CBAJ_G0029763.1 mouse_genomes_project 5 138584419 138595474 + Ddx55 protein_coding processed_transcript MGP_CBAJ_T0074067.1 MGP_CBAJ_G0029763.1 mouse_genomes_project 5 138587122 138588552 + Ddx55 protein_coding retained_intron MGP_CBAJ_T0074068.1 MGP_CBAJ_G0029763.1 mouse_genomes_project 5 138596588 138602802 + Ddx55 protein_coding processed_transcript MGP_CBAJ_T0070976.1 MGP_CBAJ_G0029166.1 mouse_genomes_project 5 38434789 38467152 + MGP_CBAJ_P0070976 Crmp1 protein_coding protein_coding MGP_CBAJ_T0070977.1 MGP_CBAJ_G0029166.1 mouse_genomes_project 5 38434934 38493092 + MGP_CBAJ_P0070977 Crmp1 protein_coding protein_coding MGP_CBAJ_T0070978.1 MGP_CBAJ_G0029166.1 mouse_genomes_project 5 38435588 38477586 + MGP_CBAJ_P0070978 Crmp1 protein_coding protein_coding MGP_CBAJ_T0070979.1 MGP_CBAJ_G0029166.1 mouse_genomes_project 5 38438624 38493060 + MGP_CBAJ_P0070979 Crmp1 protein_coding protein_coding MGP_CBAJ_T0070980.1 MGP_CBAJ_G0029166.1 mouse_genomes_project 5 38438705 38463915 + Crmp1 protein_coding retained_intron MGP_CBAJ_T0070981.1 MGP_CBAJ_G0029166.1 mouse_genomes_project 5 38440295 38478325 + MGP_CBAJ_P0070981 Crmp1 protein_coding protein_coding MGP_CBAJ_T0070982.1 MGP_CBAJ_G0029166.1 mouse_genomes_project 5 38467107 38476176 + Crmp1 protein_coding retained_intron MGP_CBAJ_T0070983.1 MGP_CBAJ_G0029166.1 mouse_genomes_project 5 38479200 38482623 + Crmp1 protein_coding retained_intron MGP_CBAJ_T0070984.1 MGP_CBAJ_G0029166.1 mouse_genomes_project 5 38479860 38482131 + Crmp1 protein_coding retained_intron MGP_CBAJ_T0070985.1 MGP_CBAJ_G0029166.1 mouse_genomes_project 5 38483324 38487621 + Crmp1 protein_coding retained_intron MGP_CBAJ_T0014972.1 MGP_CBAJ_G0013084.1 mouse_genomes_project 5 161987619 161987790 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0071333.1 MGP_CBAJ_G0029227.1 mouse_genomes_project 5 61265942 61751352 + MGP_CBAJ_P0071333 Pcdh7 protein_coding protein_coding MGP_CBAJ_T0071334.1 MGP_CBAJ_G0029227.1 mouse_genomes_project 5 61265995 61280457 + MGP_CBAJ_P0071334 Pcdh7 protein_coding protein_coding MGP_CBAJ_T0071335.1 MGP_CBAJ_G0029227.1 mouse_genomes_project 5 61267073 61747465 + MGP_CBAJ_P0071335 Pcdh7 protein_coding protein_coding MGP_CBAJ_T0071336.1 MGP_CBAJ_G0029227.1 mouse_genomes_project 5 61268099 61503937 + MGP_CBAJ_P0071336 Pcdh7 protein_coding protein_coding MGP_CBAJ_T0071337.1 MGP_CBAJ_G0029227.1 mouse_genomes_project 5 61269138 61747911 + MGP_CBAJ_P0071337 Pcdh7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071338.1 MGP_CBAJ_G0029227.1 mouse_genomes_project 5 61269889 61499220 + MGP_CBAJ_P0071338 Pcdh7 protein_coding protein_coding MGP_CBAJ_T0071339.1 MGP_CBAJ_G0029227.1 mouse_genomes_project 5 61270185 61747568 + MGP_CBAJ_P0071339 Pcdh7 protein_coding protein_coding MGP_CBAJ_T0069946.1 MGP_CBAJ_G0028992.1 mouse_genomes_project 5 22297337 22298099 - MGP_CBAJ_P0069946 Rpl10 protein_coding protein_coding MGP_CBAJ_T0099345.1 MGP_CBAJ_G0037600.1 mouse_genomes_project 5 37779671 37779775 - Gm24878 snRNA snRNA MGP_CBAJ_T0010575.1 MGP_CBAJ_G0008713.1 mouse_genomes_project 5 113873706 113873767 + Mir5619 miRNA miRNA MGP_CBAJ_T0073492.1 MGP_CBAJ_G0029667.1 mouse_genomes_project 5 133490063 133510291 - MGP_CBAJ_P0073492 Plbd2 protein_coding protein_coding MGP_CBAJ_T0073493.1 MGP_CBAJ_G0029667.1 mouse_genomes_project 5 133492028 133510267 - Plbd2 protein_coding retained_intron MGP_CBAJ_T0073494.1 MGP_CBAJ_G0029667.1 mouse_genomes_project 5 133494080 133510278 - Plbd2 protein_coding retained_intron MGP_CBAJ_T0008176.1 MGP_CBAJ_G0006648.1 mouse_genomes_project 5 123008275 123014780 + C130026L21Rik lincRNA lincRNA MGP_CBAJ_T0008177.1 MGP_CBAJ_G0006648.1 mouse_genomes_project 5 123008414 123013988 + C130026L21Rik lincRNA lincRNA MGP_CBAJ_T0008178.1 MGP_CBAJ_G0006648.1 mouse_genomes_project 5 123008421 123009727 + C130026L21Rik lincRNA lincRNA MGP_CBAJ_T0008179.1 MGP_CBAJ_G0006648.1 mouse_genomes_project 5 123009284 123039866 + C130026L21Rik lincRNA lincRNA MGP_CBAJ_T0014737.1 MGP_CBAJ_G0012849.1 mouse_genomes_project 5 43634893 43636169 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008080.1 MGP_CBAJ_G0006578.1 mouse_genomes_project 5 83491570 83536529 + Gm34728 lincRNA lincRNA MGP_CBAJ_T0010570.1 MGP_CBAJ_G0008708.1 mouse_genomes_project 5 98831478 98831548 - Gm24322 miRNA miRNA MGP_CBAJ_T0014698.1 MGP_CBAJ_G0012810.1 mouse_genomes_project 5 26753765 26753900 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014916.1 MGP_CBAJ_G0013028.1 mouse_genomes_project 5 127375075 127375377 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0075654.1 MGP_CBAJ_G0030082.1 mouse_genomes_project 5 168535748 168797113 + MGP_CBAJ_P0075654 Fry protein_coding protein_coding MGP_CBAJ_T0075655.1 MGP_CBAJ_G0030082.1 mouse_genomes_project 5 168535770 168805961 + Fry protein_coding retained_intron MGP_CBAJ_T0075656.1 MGP_CBAJ_G0030082.1 mouse_genomes_project 5 168535770 168802361 + MGP_CBAJ_P0075656 Fry protein_coding protein_coding MGP_CBAJ_T0075657.1 MGP_CBAJ_G0030082.1 mouse_genomes_project 5 168620219 168797088 + MGP_CBAJ_P0075657 Fry protein_coding protein_coding MGP_CBAJ_T0075658.1 MGP_CBAJ_G0030082.1 mouse_genomes_project 5 168703452 168705830 + Fry protein_coding retained_intron MGP_CBAJ_T0075659.1 MGP_CBAJ_G0030082.1 mouse_genomes_project 5 168705691 168979263 + MGP_CBAJ_P0075659 Fry protein_coding protein_coding MGP_CBAJ_T0075660.1 MGP_CBAJ_G0030082.1 mouse_genomes_project 5 168743420 168851754 + Fry protein_coding retained_intron MGP_CBAJ_T0075661.1 MGP_CBAJ_G0030082.1 mouse_genomes_project 5 168862851 168865522 + Fry protein_coding retained_intron MGP_CBAJ_T0075662.1 MGP_CBAJ_G0030082.1 mouse_genomes_project 5 168900306 168906119 + Fry protein_coding retained_intron MGP_CBAJ_T0075663.1 MGP_CBAJ_G0030082.1 mouse_genomes_project 5 168907811 168979263 + MGP_CBAJ_P0075663 Fry protein_coding protein_coding MGP_CBAJ_T0075664.1 MGP_CBAJ_G0030082.1 mouse_genomes_project 5 168929533 168979263 + MGP_CBAJ_P0075664 Fry protein_coding protein_coding MGP_CBAJ_T0075665.1 MGP_CBAJ_G0030082.1 mouse_genomes_project 5 168936149 168978410 + Fry protein_coding retained_intron MGP_CBAJ_T0075666.1 MGP_CBAJ_G0030082.1 mouse_genomes_project 5 168939084 168942778 + Fry protein_coding retained_intron MGP_CBAJ_T0075667.1 MGP_CBAJ_G0030082.1 mouse_genomes_project 5 168968814 168971432 + Fry protein_coding retained_intron MGP_CBAJ_T0075668.1 MGP_CBAJ_G0030082.1 mouse_genomes_project 5 168971743 168973617 + Fry protein_coding retained_intron MGP_CBAJ_T0075669.1 MGP_CBAJ_G0030082.1 mouse_genomes_project 5 168977483 168979145 + Fry protein_coding retained_intron MGP_CBAJ_T0001814.1 MGP_CBAJ_G0001731.1 mouse_genomes_project 5 146589605 146590305 - TEC TEC MGP_CBAJ_T0014638.1 MGP_CBAJ_G0012750.1 mouse_genomes_project 5 5626688 5627103 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0074454.1 MGP_CBAJ_G0029829.1 mouse_genomes_project 5 150267416 150268694 - MGP_CBAJ_P0074454 Cldn13 protein_coding protein_coding MGP_CBAJ_T0008007.1 MGP_CBAJ_G0006518.1 mouse_genomes_project 5 40816687 40842779 + Gm42524 lincRNA lincRNA MGP_CBAJ_T0014923.1 MGP_CBAJ_G0013035.1 mouse_genomes_project 5 134814319 134815145 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101926.1 MGP_CBAJ_G0039957.1 mouse_genomes_project 5 11750 13086 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0011473.1 MGP_CBAJ_G0009611.1 mouse_genomes_project 5 109826875 109827013 + Gm28030 misc_RNA misc_RNA MGP_CBAJ_T0075121.1 MGP_CBAJ_G0029964.1 mouse_genomes_project 5 156962812 156967039 - MGP_CBAJ_P0075121 Mrm2 protein_coding protein_coding MGP_CBAJ_T0101941.1 MGP_CBAJ_G0039972.1 mouse_genomes_project 5 94719156 94738269 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0072371.1 MGP_CBAJ_G0029445.1 mouse_genomes_project 5 108045146 108064527 + MGP_CBAJ_P0072371 Bmp3 protein_coding protein_coding MGP_CBAJ_T0072372.1 MGP_CBAJ_G0029445.1 mouse_genomes_project 5 108045170 108075180 + MGP_CBAJ_P0072372 Bmp3 protein_coding protein_coding MGP_CBAJ_T0072373.1 MGP_CBAJ_G0029445.1 mouse_genomes_project 5 108045182 108075180 + MGP_CBAJ_P0072373 Bmp3 protein_coding protein_coding MGP_CBAJ_T0010571.1 MGP_CBAJ_G0008709.1 mouse_genomes_project 5 100759265 100759365 + Mir6415 miRNA miRNA MGP_CBAJ_T0001768.1 MGP_CBAJ_G0001686.1 mouse_genomes_project 5 135326641 135327823 - TEC TEC MGP_CBAJ_T0014977.1 MGP_CBAJ_G0013089.1 mouse_genomes_project 5 163035510 163035675 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0074691.1 MGP_CBAJ_G0029873.1 mouse_genomes_project 5 152601102 152609752 + MGP_CBAJ_P0074691 Ift22 protein_coding protein_coding MGP_CBAJ_T0074692.1 MGP_CBAJ_G0029873.1 mouse_genomes_project 5 152601106 152608902 + MGP_CBAJ_P0074692 Ift22 protein_coding protein_coding MGP_CBAJ_T0074693.1 MGP_CBAJ_G0029873.1 mouse_genomes_project 5 152601136 152609753 + MGP_CBAJ_P0074693 Ift22 protein_coding protein_coding MGP_CBAJ_T0074694.1 MGP_CBAJ_G0029873.1 mouse_genomes_project 5 152607663 152608237 + Ift22 protein_coding retained_intron MGP_CBAJ_T0070246.1 MGP_CBAJ_G0029053.1 mouse_genomes_project 5 30510371 30550229 + MGP_CBAJ_P0070246 protein_coding protein_coding MGP_CBAJ_T0070247.1 MGP_CBAJ_G0029053.1 mouse_genomes_project 5 30510425 30512464 + protein_coding retained_intron MGP_CBAJ_T0070248.1 MGP_CBAJ_G0029053.1 mouse_genomes_project 5 30510430 30528855 + protein_coding retained_intron MGP_CBAJ_T0070249.1 MGP_CBAJ_G0029053.1 mouse_genomes_project 5 30510437 30536316 + protein_coding retained_intron MGP_CBAJ_T0070250.1 MGP_CBAJ_G0029053.1 mouse_genomes_project 5 30510440 30535555 + MGP_CBAJ_P0070250 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070251.1 MGP_CBAJ_G0029053.1 mouse_genomes_project 5 30510464 30546775 + MGP_CBAJ_P0070251 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070252.1 MGP_CBAJ_G0029053.1 mouse_genomes_project 5 30540865 30544795 + protein_coding retained_intron MGP_CBAJ_T0070253.1 MGP_CBAJ_G0029053.1 mouse_genomes_project 5 30541345 30545049 + protein_coding processed_transcript MGP_CBAJ_T0071619.1 MGP_CBAJ_G0029274.1 mouse_genomes_project 5 75905788 76009423 - MGP_CBAJ_P0071619 Gabrg1 protein_coding protein_coding MGP_CBAJ_T0071620.1 MGP_CBAJ_G0029274.1 mouse_genomes_project 5 75906516 76009111 - MGP_CBAJ_P0071620 Gabrg1 protein_coding protein_coding MGP_CBAJ_T0071621.1 MGP_CBAJ_G0029274.1 mouse_genomes_project 5 75922484 76009120 - Gabrg1 protein_coding retained_intron MGP_CBAJ_T0071622.1 MGP_CBAJ_G0029274.1 mouse_genomes_project 5 75977896 76009120 - Gabrg1 protein_coding retained_intron MGP_CBAJ_T0098208.1 MGP_CBAJ_G0036481.1 mouse_genomes_project 5 2169882 2170010 - Gm22897 scaRNA scaRNA MGP_CBAJ_T0014813.1 MGP_CBAJ_G0012925.1 mouse_genomes_project 5 81867129 81867479 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099369.1 MGP_CBAJ_G0037624.1 mouse_genomes_project 5 93388867 93389037 + Gm24524 snRNA snRNA MGP_CBAJ_T0001781.1 MGP_CBAJ_G0001699.1 mouse_genomes_project 5 137420160 137420622 - TEC TEC MGP_CBAJ_T0004668.1 MGP_CBAJ_G0004031.1 mouse_genomes_project 5 110115527 110124784 + Gm15777 antisense antisense MGP_CBAJ_T0004549.1 MGP_CBAJ_G0003939.1 mouse_genomes_project 5 6424381 6454337 - Gm5106 antisense antisense MGP_CBAJ_T0069799.1 MGP_CBAJ_G0028958.1 mouse_genomes_project 5 12071877 12096823 + MGP_CBAJ_P0069799 protein_coding protein_coding MGP_CBAJ_T0072284.1 MGP_CBAJ_G0029423.1 mouse_genomes_project 5 100913863 100916767 + MGP_CBAJ_P0072284 Stbd1 protein_coding protein_coding MGP_CBAJ_T0072285.1 MGP_CBAJ_G0029423.1 mouse_genomes_project 5 100913873 100918527 + MGP_CBAJ_P0072285 Stbd1 protein_coding protein_coding MGP_CBAJ_T0072286.1 MGP_CBAJ_G0029423.1 mouse_genomes_project 5 100913890 100918242 + MGP_CBAJ_P0072286 Stbd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070090.1 MGP_CBAJ_G0029017.1 mouse_genomes_project 5 24345074 24372392 + MGP_CBAJ_P0070090 Nub1 protein_coding protein_coding MGP_CBAJ_T0070091.1 MGP_CBAJ_G0029017.1 mouse_genomes_project 5 24345366 24372394 + MGP_CBAJ_P0070091 Nub1 protein_coding protein_coding MGP_CBAJ_T0070092.1 MGP_CBAJ_G0029017.1 mouse_genomes_project 5 24345529 24372392 + Nub1 protein_coding retained_intron MGP_CBAJ_T0014908.1 MGP_CBAJ_G0013020.1 mouse_genomes_project 5 125582074 125582442 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101952.1 MGP_CBAJ_G0039983.1 mouse_genomes_project 5 140012706 140013389 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010615.1 MGP_CBAJ_G0008753.1 mouse_genomes_project 5 160216314 160216440 + Gm44405 miRNA miRNA MGP_CBAJ_T0099411.1 MGP_CBAJ_G0037666.1 mouse_genomes_project 5 170273803 170273910 - Gm24242 snRNA snRNA MGP_CBAJ_T0072016.1 MGP_CBAJ_G0029354.1 mouse_genomes_project 5 94978026 95013886 - MGP_CBAJ_P0072016 Sult1b1 protein_coding protein_coding MGP_CBAJ_T0072017.1 MGP_CBAJ_G0029354.1 mouse_genomes_project 5 94978053 95011901 - MGP_CBAJ_P0072017 Sult1b1 protein_coding protein_coding MGP_CBAJ_T0072018.1 MGP_CBAJ_G0029354.1 mouse_genomes_project 5 94979376 95010825 - MGP_CBAJ_P0072018 Sult1b1 protein_coding protein_coding MGP_CBAJ_T0014934.1 MGP_CBAJ_G0013046.1 mouse_genomes_project 5 140207400 140207933 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0072022.1 MGP_CBAJ_G0029357.1 mouse_genomes_project 5 95155298 95166760 + Csn1s1 protein_coding retained_intron MGP_CBAJ_T0072023.1 MGP_CBAJ_G0029357.1 mouse_genomes_project 5 95155298 95156568 + Csn1s1 protein_coding retained_intron MGP_CBAJ_T0072024.1 MGP_CBAJ_G0029357.1 mouse_genomes_project 5 95155298 95156626 + Csn1s1 protein_coding retained_intron MGP_CBAJ_T0072025.1 MGP_CBAJ_G0029357.1 mouse_genomes_project 5 95155317 95166369 + MGP_CBAJ_P0072025 Csn1s1 protein_coding protein_coding MGP_CBAJ_T0072026.1 MGP_CBAJ_G0029357.1 mouse_genomes_project 5 95155318 95177180 + MGP_CBAJ_P0072026 Csn1s1 protein_coding protein_coding MGP_CBAJ_T0072027.1 MGP_CBAJ_G0029357.1 mouse_genomes_project 5 95155323 95177180 + MGP_CBAJ_P0072027 Csn1s1 protein_coding protein_coding MGP_CBAJ_T0072028.1 MGP_CBAJ_G0029357.1 mouse_genomes_project 5 95155937 95167225 + Csn1s1 protein_coding processed_transcript MGP_CBAJ_T0072029.1 MGP_CBAJ_G0029357.1 mouse_genomes_project 5 95156323 95161477 + Csn1s1 protein_coding retained_intron MGP_CBAJ_T0072030.1 MGP_CBAJ_G0029357.1 mouse_genomes_project 5 95163147 95170490 + MGP_CBAJ_P0072030 Csn1s1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072031.1 MGP_CBAJ_G0029357.1 mouse_genomes_project 5 95163658 95164584 + Csn1s1 protein_coding retained_intron MGP_CBAJ_T0072032.1 MGP_CBAJ_G0029357.1 mouse_genomes_project 5 95172631 95177100 + Csn1s1 protein_coding retained_intron MGP_CBAJ_T0072033.1 MGP_CBAJ_G0029357.1 mouse_genomes_project 5 95173605 95177126 + Csn1s1 protein_coding retained_intron MGP_CBAJ_T0072034.1 MGP_CBAJ_G0029357.1 mouse_genomes_project 5 95175130 95176660 + Csn1s1 protein_coding retained_intron MGP_CBAJ_T0014802.1 MGP_CBAJ_G0012914.1 mouse_genomes_project 5 77726748 77727262 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0069784.1 MGP_CBAJ_G0028955.1 mouse_genomes_project 5 10413845 10632591 + MGP_CBAJ_P0069784 Sema3d protein_coding protein_coding MGP_CBAJ_T0069785.1 MGP_CBAJ_G0028955.1 mouse_genomes_project 5 10413966 10603635 + Sema3d protein_coding processed_transcript MGP_CBAJ_T0069786.1 MGP_CBAJ_G0028955.1 mouse_genomes_project 5 10413966 10622803 + MGP_CBAJ_P0069786 Sema3d protein_coding protein_coding MGP_CBAJ_T0069787.1 MGP_CBAJ_G0028955.1 mouse_genomes_project 5 10524761 10549594 + Sema3d protein_coding processed_transcript MGP_CBAJ_T0069788.1 MGP_CBAJ_G0028955.1 mouse_genomes_project 5 10619774 10632395 + Sema3d protein_coding processed_transcript MGP_CBAJ_T0014839.1 MGP_CBAJ_G0012951.1 mouse_genomes_project 5 95901199 95901578 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010557.1 MGP_CBAJ_G0008695.1 mouse_genomes_project 5 68425722 68425800 - Gm23967 miRNA miRNA MGP_CBAJ_T0073161.1 MGP_CBAJ_G0029604.1 mouse_genomes_project 5 126568452 126607787 - MGP_CBAJ_P0073161 Trpv4 protein_coding protein_coding MGP_CBAJ_T0073162.1 MGP_CBAJ_G0029604.1 mouse_genomes_project 5 126568454 126607784 - MGP_CBAJ_P0073162 Trpv4 protein_coding protein_coding MGP_CBAJ_T0073163.1 MGP_CBAJ_G0029604.1 mouse_genomes_project 5 126568457 126585687 - Trpv4 protein_coding retained_intron MGP_CBAJ_T0073164.1 MGP_CBAJ_G0029604.1 mouse_genomes_project 5 126568953 126594421 - MGP_CBAJ_P0073164 Trpv4 protein_coding protein_coding MGP_CBAJ_T0073165.1 MGP_CBAJ_G0029604.1 mouse_genomes_project 5 126568953 126594421 - MGP_CBAJ_P0073165 Trpv4 protein_coding protein_coding MGP_CBAJ_T0073166.1 MGP_CBAJ_G0029604.1 mouse_genomes_project 5 126568953 126594421 - MGP_CBAJ_P0073166 Trpv4 protein_coding protein_coding MGP_CBAJ_T0073167.1 MGP_CBAJ_G0029604.1 mouse_genomes_project 5 126576199 126580093 - Trpv4 protein_coding retained_intron MGP_CBAJ_T0072177.1 MGP_CBAJ_G0029400.1 mouse_genomes_project 5 98941640 98943515 + MGP_CBAJ_P0072177 Cxcl1 protein_coding protein_coding MGP_CBAJ_T0072178.1 MGP_CBAJ_G0029400.1 mouse_genomes_project 5 98941642 98943513 + Cxcl1 protein_coding retained_intron MGP_CBAJ_T0073561.1 MGP_CBAJ_G0029687.1 mouse_genomes_project 5 134513778 134684011 + MGP_CBAJ_P0073561 Gm15800 protein_coding protein_coding MGP_CBAJ_T0073562.1 MGP_CBAJ_G0029687.1 mouse_genomes_project 5 134599609 134617849 + MGP_CBAJ_P0073562 Gm15800 protein_coding protein_coding MGP_CBAJ_T0073563.1 MGP_CBAJ_G0029687.1 mouse_genomes_project 5 134600212 134618432 + Gm15800 protein_coding retained_intron MGP_CBAJ_T0073564.1 MGP_CBAJ_G0029687.1 mouse_genomes_project 5 134604671 134612847 + MGP_CBAJ_P0073564 Gm15800 protein_coding protein_coding MGP_CBAJ_T0073565.1 MGP_CBAJ_G0029687.1 mouse_genomes_project 5 134619450 134638549 + MGP_CBAJ_P0073565 Gm15800 protein_coding protein_coding MGP_CBAJ_T0073566.1 MGP_CBAJ_G0029687.1 mouse_genomes_project 5 134629475 134632382 + Gm15800 protein_coding processed_transcript MGP_CBAJ_T0073567.1 MGP_CBAJ_G0029687.1 mouse_genomes_project 5 134633751 134636505 + Gm15800 protein_coding processed_transcript MGP_CBAJ_T0072115.1 MGP_CBAJ_G0029383.1 mouse_genomes_project 5 97262899 97302986 - MGP_CBAJ_P0072115 Gc protein_coding protein_coding MGP_CBAJ_T0072116.1 MGP_CBAJ_G0029383.1 mouse_genomes_project 5 97267254 97278062 - MGP_CBAJ_P0072116 Gc protein_coding protein_coding MGP_CBAJ_T0010564.1 MGP_CBAJ_G0008702.1 mouse_genomes_project 5 80923402 80923476 + Mir7025 miRNA miRNA MGP_CBAJ_T0008129.1 MGP_CBAJ_G0006616.1 mouse_genomes_project 5 111178856 111181918 + Gm20484 lincRNA lincRNA MGP_CBAJ_T0070362.1 MGP_CBAJ_G0029073.1 mouse_genomes_project 5 31391956 31419182 + MGP_CBAJ_P0070362 Cad protein_coding protein_coding MGP_CBAJ_T0070363.1 MGP_CBAJ_G0029073.1 mouse_genomes_project 5 31391987 31408465 + MGP_CBAJ_P0070363 Cad protein_coding protein_coding MGP_CBAJ_T0070364.1 MGP_CBAJ_G0029073.1 mouse_genomes_project 5 31392104 31418935 + MGP_CBAJ_P0070364 Cad protein_coding protein_coding MGP_CBAJ_T0070365.1 MGP_CBAJ_G0029073.1 mouse_genomes_project 5 31392104 31418935 + MGP_CBAJ_P0070365 Cad protein_coding protein_coding MGP_CBAJ_T0070366.1 MGP_CBAJ_G0029073.1 mouse_genomes_project 5 31392131 31418898 + MGP_CBAJ_P0070366 Cad protein_coding protein_coding MGP_CBAJ_T0070367.1 MGP_CBAJ_G0029073.1 mouse_genomes_project 5 31395814 31397105 + Cad protein_coding retained_intron MGP_CBAJ_T0070368.1 MGP_CBAJ_G0029073.1 mouse_genomes_project 5 31398934 31407670 + Cad protein_coding retained_intron MGP_CBAJ_T0070369.1 MGP_CBAJ_G0029073.1 mouse_genomes_project 5 31406996 31407882 + Cad protein_coding processed_transcript MGP_CBAJ_T0070370.1 MGP_CBAJ_G0029073.1 mouse_genomes_project 5 31411057 31412896 + Cad protein_coding processed_transcript MGP_CBAJ_T0070371.1 MGP_CBAJ_G0029073.1 mouse_genomes_project 5 31411170 31413407 + Cad protein_coding retained_intron MGP_CBAJ_T0070372.1 MGP_CBAJ_G0029073.1 mouse_genomes_project 5 31411256 31413684 + Cad protein_coding retained_intron MGP_CBAJ_T0070373.1 MGP_CBAJ_G0029073.1 mouse_genomes_project 5 31413010 31414283 + Cad protein_coding retained_intron MGP_CBAJ_T0070374.1 MGP_CBAJ_G0029073.1 mouse_genomes_project 5 31414819 31416731 + MGP_CBAJ_P0070374 Cad protein_coding protein_coding MGP_CBAJ_T0070375.1 MGP_CBAJ_G0029073.1 mouse_genomes_project 5 31416515 31417368 + Cad protein_coding retained_intron MGP_CBAJ_T0074494.1 MGP_CBAJ_G0029838.1 mouse_genomes_project 5 150480356 150517884 + Mlxipl protein_coding processed_transcript MGP_CBAJ_T0074495.1 MGP_CBAJ_G0029838.1 mouse_genomes_project 5 150500015 150519140 + Mlxipl protein_coding retained_intron MGP_CBAJ_T0074496.1 MGP_CBAJ_G0029838.1 mouse_genomes_project 5 150500026 150519791 + MGP_CBAJ_P0074496 Mlxipl protein_coding protein_coding MGP_CBAJ_T0074497.1 MGP_CBAJ_G0029838.1 mouse_genomes_project 5 150500028 150537361 + MGP_CBAJ_P0074497 Mlxipl protein_coding nonsense_mediated_decay MGP_CBAJ_T0074498.1 MGP_CBAJ_G0029838.1 mouse_genomes_project 5 150500037 150537361 + MGP_CBAJ_P0074498 Mlxipl protein_coding nonsense_mediated_decay MGP_CBAJ_T0074499.1 MGP_CBAJ_G0029838.1 mouse_genomes_project 5 150500037 150537361 + MGP_CBAJ_P0074499 Mlxipl protein_coding nonsense_mediated_decay MGP_CBAJ_T0074500.1 MGP_CBAJ_G0029838.1 mouse_genomes_project 5 150500037 150537361 + MGP_CBAJ_P0074500 Mlxipl protein_coding nonsense_mediated_decay MGP_CBAJ_T0074501.1 MGP_CBAJ_G0029838.1 mouse_genomes_project 5 150500042 150537821 + MGP_CBAJ_P0074501 Mlxipl protein_coding protein_coding MGP_CBAJ_T0074502.1 MGP_CBAJ_G0029838.1 mouse_genomes_project 5 150533048 150534049 + MGP_CBAJ_P0074502 Mlxipl protein_coding protein_coding MGP_CBAJ_T0074503.1 MGP_CBAJ_G0029838.1 mouse_genomes_project 5 150533069 150535177 + MGP_CBAJ_P0074503 Mlxipl protein_coding protein_coding MGP_CBAJ_T0008033.1 MGP_CBAJ_G0006541.1 mouse_genomes_project 5 56259807 56273237 - Gm42745 lincRNA lincRNA MGP_CBAJ_T0098053.1 MGP_CBAJ_G0036326.1 mouse_genomes_project 5 38273420 38273523 - Gm25551 rRNA rRNA MGP_CBAJ_T0099408.1 MGP_CBAJ_G0037663.1 mouse_genomes_project 5 169036893 169037034 - Gm25284 snRNA snRNA MGP_CBAJ_T0101143.1 MGP_CBAJ_G0039333.1 mouse_genomes_project 5 93369258 93370258 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101144.1 MGP_CBAJ_G0039333.1 mouse_genomes_project 5 93369313 93370397 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0001484.1 MGP_CBAJ_G0001405.1 mouse_genomes_project 5 45042854 45044596 + TEC TEC MGP_CBAJ_T0014644.1 MGP_CBAJ_G0012756.1 mouse_genomes_project 5 8446814 8447852 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0072322.1 MGP_CBAJ_G0029431.1 mouse_genomes_project 5 104848418 104852536 + MGP_CBAJ_P0072322 Cxcl13 protein_coding protein_coding MGP_CBAJ_T0072105.1 MGP_CBAJ_G0029381.1 mouse_genomes_project 5 96543585 96563692 + MGP_CBAJ_P0072105 Dck protein_coding protein_coding MGP_CBAJ_T0072106.1 MGP_CBAJ_G0029381.1 mouse_genomes_project 5 96547773 96548592 + Dck protein_coding retained_intron MGP_CBAJ_T0074952.1 MGP_CBAJ_G0029928.1 mouse_genomes_project 5 154272648 154453010 + MGP_CBAJ_P0074952 protein_coding protein_coding MGP_CBAJ_T0001677.1 MGP_CBAJ_G0001595.1 mouse_genomes_project 5 100412842 100413400 - TEC TEC MGP_CBAJ_T0074164.1 MGP_CBAJ_G0029781.1 mouse_genomes_project 5 142001487 142080356 + Glt1d1 protein_coding retained_intron MGP_CBAJ_T0074165.1 MGP_CBAJ_G0029781.1 mouse_genomes_project 5 142001487 142104301 + MGP_CBAJ_P0074165 Glt1d1 protein_coding protein_coding MGP_CBAJ_T0074166.1 MGP_CBAJ_G0029781.1 mouse_genomes_project 5 142036058 142078324 + Glt1d1 protein_coding retained_intron MGP_CBAJ_T0001543.1 MGP_CBAJ_G0001463.1 mouse_genomes_project 5 51974589 51977698 - TEC TEC MGP_CBAJ_T0014639.1 MGP_CBAJ_G0012751.1 mouse_genomes_project 5 6648714 6648909 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004561.1 MGP_CBAJ_G0003949.1 mouse_genomes_project 5 23915377 23918671 + Gm15589 antisense antisense MGP_CBAJ_T0073841.1 MGP_CBAJ_G0029728.1 mouse_genomes_project 5 136886251 136894089 + Setd1b protein_coding retained_intron MGP_CBAJ_T0073842.1 MGP_CBAJ_G0029728.1 mouse_genomes_project 5 136886251 136920098 + MGP_CBAJ_P0073842 Setd1b protein_coding protein_coding MGP_CBAJ_T0073843.1 MGP_CBAJ_G0029728.1 mouse_genomes_project 5 136886251 136921307 + MGP_CBAJ_P0073843 Setd1b protein_coding protein_coding MGP_CBAJ_T0073844.1 MGP_CBAJ_G0029728.1 mouse_genomes_project 5 136887007 136920098 + MGP_CBAJ_P0073844 Setd1b protein_coding protein_coding MGP_CBAJ_T0073845.1 MGP_CBAJ_G0029728.1 mouse_genomes_project 5 136915565 136918021 + Setd1b protein_coding retained_intron MGP_CBAJ_T0073846.1 MGP_CBAJ_G0029728.1 mouse_genomes_project 5 136916238 136916965 + MGP_CBAJ_P0073846 Setd1b protein_coding protein_coding MGP_CBAJ_T0004576.1 MGP_CBAJ_G0003960.1 mouse_genomes_project 5 32534773 32539661 - Gm17130 antisense antisense MGP_CBAJ_T0014655.1 MGP_CBAJ_G0012767.1 mouse_genomes_project 5 15048485 15049504 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008286.1 MGP_CBAJ_G0006716.1 mouse_genomes_project 5 141507504 141507909 - Gm43476 lincRNA lincRNA MGP_CBAJ_T0071260.1 MGP_CBAJ_G0029214.1 mouse_genomes_project 5 55120326 55220877 - MGP_CBAJ_P0071260 Ccdc149 protein_coding protein_coding MGP_CBAJ_T0071261.1 MGP_CBAJ_G0029214.1 mouse_genomes_project 5 55120332 55221000 - MGP_CBAJ_P0071261 Ccdc149 protein_coding protein_coding MGP_CBAJ_T0072388.1 MGP_CBAJ_G0029449.1 mouse_genomes_project 5 109282166 109305206 - MGP_CBAJ_P0072388 Hnrnpd protein_coding protein_coding MGP_CBAJ_T0072389.1 MGP_CBAJ_G0029449.1 mouse_genomes_project 5 109286840 109305205 - MGP_CBAJ_P0072389 Hnrnpd protein_coding protein_coding MGP_CBAJ_T0072390.1 MGP_CBAJ_G0029449.1 mouse_genomes_project 5 109287240 109305185 - MGP_CBAJ_P0072390 Hnrnpd protein_coding protein_coding MGP_CBAJ_T0072391.1 MGP_CBAJ_G0029449.1 mouse_genomes_project 5 109287244 109305203 - MGP_CBAJ_P0072391 Hnrnpd protein_coding protein_coding MGP_CBAJ_T0072392.1 MGP_CBAJ_G0029449.1 mouse_genomes_project 5 109287245 109302777 - MGP_CBAJ_P0072392 Hnrnpd protein_coding nonsense_mediated_decay MGP_CBAJ_T0072393.1 MGP_CBAJ_G0029449.1 mouse_genomes_project 5 109287393 109292417 - MGP_CBAJ_P0072393 Hnrnpd protein_coding nonsense_mediated_decay MGP_CBAJ_T0072394.1 MGP_CBAJ_G0029449.1 mouse_genomes_project 5 109287410 109290993 - MGP_CBAJ_P0072394 Hnrnpd protein_coding nonsense_mediated_decay MGP_CBAJ_T0072395.1 MGP_CBAJ_G0029449.1 mouse_genomes_project 5 109288525 109304892 - MGP_CBAJ_P0072395 Hnrnpd protein_coding nonsense_mediated_decay MGP_CBAJ_T0072396.1 MGP_CBAJ_G0029449.1 mouse_genomes_project 5 109290985 109292630 - Hnrnpd protein_coding retained_intron MGP_CBAJ_T0072397.1 MGP_CBAJ_G0029449.1 mouse_genomes_project 5 109292269 109305202 - MGP_CBAJ_P0072397 Hnrnpd protein_coding protein_coding MGP_CBAJ_T0072398.1 MGP_CBAJ_G0029449.1 mouse_genomes_project 5 109293550 109305127 - MGP_CBAJ_P0072398 Hnrnpd protein_coding protein_coding MGP_CBAJ_T0072666.1 MGP_CBAJ_G0029507.1 mouse_genomes_project 5 117904009 117917700 + MGP_CBAJ_P0072666 1700028K03Rik protein_coding protein_coding MGP_CBAJ_T0072667.1 MGP_CBAJ_G0029507.1 mouse_genomes_project 5 117904020 117920599 + 1700028K03Rik protein_coding processed_transcript MGP_CBAJ_T0072668.1 MGP_CBAJ_G0029507.1 mouse_genomes_project 5 117904037 117918536 + MGP_CBAJ_P0072668 1700028K03Rik protein_coding protein_coding MGP_CBAJ_T0072669.1 MGP_CBAJ_G0029507.1 mouse_genomes_project 5 117904057 117918344 + 1700028K03Rik protein_coding retained_intron MGP_CBAJ_T0074212.1 MGP_CBAJ_G0029790.1 mouse_genomes_project 5 144214636 144240943 + MGP_CBAJ_P0074212 Mmp17 protein_coding protein_coding MGP_CBAJ_T0074213.1 MGP_CBAJ_G0029790.1 mouse_genomes_project 5 144226646 144232463 + Mmp17 protein_coding retained_intron MGP_CBAJ_T0071809.1 MGP_CBAJ_G0029308.1 mouse_genomes_project 5 81727994 81776818 - MGP_CBAJ_P0071809 Kdr protein_coding protein_coding MGP_CBAJ_T0071810.1 MGP_CBAJ_G0029308.1 mouse_genomes_project 5 81755774 81776818 - Kdr protein_coding retained_intron MGP_CBAJ_T0071811.1 MGP_CBAJ_G0029308.1 mouse_genomes_project 5 81759653 81776818 - Kdr protein_coding retained_intron MGP_CBAJ_T0101140.1 MGP_CBAJ_G0039331.1 mouse_genomes_project 5 82021870 82022340 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0073616.1 MGP_CBAJ_G0029697.1 mouse_genomes_project 5 134975971 134977046 - protein_coding processed_transcript MGP_CBAJ_T0073001.1 MGP_CBAJ_G0029574.1 mouse_genomes_project 5 124286592 124526848 - MGP_CBAJ_P0073001 Myo18b protein_coding protein_coding MGP_CBAJ_T0073002.1 MGP_CBAJ_G0029574.1 mouse_genomes_project 5 124286594 124370592 - Myo18b protein_coding processed_transcript MGP_CBAJ_T0073003.1 MGP_CBAJ_G0029574.1 mouse_genomes_project 5 124383583 124493084 - Myo18b protein_coding processed_transcript MGP_CBAJ_T0073004.1 MGP_CBAJ_G0029574.1 mouse_genomes_project 5 124430167 124493987 - MGP_CBAJ_P0073004 Myo18b protein_coding nonsense_mediated_decay MGP_CBAJ_T0073696.1 MGP_CBAJ_G0029707.1 mouse_genomes_project 5 135781007 135821443 + MGP_CBAJ_P0073696 Hvcn1 protein_coding protein_coding MGP_CBAJ_T0073697.1 MGP_CBAJ_G0029707.1 mouse_genomes_project 5 135783932 135833997 + MGP_CBAJ_P0073697 Hvcn1 protein_coding protein_coding MGP_CBAJ_T0073698.1 MGP_CBAJ_G0029707.1 mouse_genomes_project 5 135784112 135830203 + MGP_CBAJ_P0073698 Hvcn1 protein_coding protein_coding MGP_CBAJ_T0073699.1 MGP_CBAJ_G0029707.1 mouse_genomes_project 5 135784316 135825687 + MGP_CBAJ_P0073699 Hvcn1 protein_coding protein_coding MGP_CBAJ_T0073700.1 MGP_CBAJ_G0029707.1 mouse_genomes_project 5 135784337 135833997 + MGP_CBAJ_P0073700 Hvcn1 protein_coding protein_coding MGP_CBAJ_T0071554.1 MGP_CBAJ_G0029261.1 mouse_genomes_project 5 71856282 71861158 - MGP_CBAJ_P0071554 Phox2b protein_coding protein_coding MGP_CBAJ_T0071555.1 MGP_CBAJ_G0029261.1 mouse_genomes_project 5 71858896 71860914 - MGP_CBAJ_P0071555 Phox2b protein_coding protein_coding MGP_CBAJ_T0099355.1 MGP_CBAJ_G0037610.1 mouse_genomes_project 5 74812891 74813017 - Gm26044 snRNA snRNA MGP_CBAJ_T0072526.1 MGP_CBAJ_G0029472.1 mouse_genomes_project 5 113454024 113601337 + Aff1 protein_coding retained_intron MGP_CBAJ_T0072527.1 MGP_CBAJ_G0029472.1 mouse_genomes_project 5 113525466 113644714 + MGP_CBAJ_P0072527 Aff1 protein_coding protein_coding MGP_CBAJ_T0072528.1 MGP_CBAJ_G0029472.1 mouse_genomes_project 5 113528429 113629312 + MGP_CBAJ_P0072528 Aff1 protein_coding protein_coding MGP_CBAJ_T0072529.1 MGP_CBAJ_G0029472.1 mouse_genomes_project 5 113528438 113644714 + MGP_CBAJ_P0072529 Aff1 protein_coding protein_coding MGP_CBAJ_T0072530.1 MGP_CBAJ_G0029472.1 mouse_genomes_project 5 113566725 113596502 + Aff1 protein_coding retained_intron MGP_CBAJ_T0074174.1 MGP_CBAJ_G0029785.1 mouse_genomes_project 5 143257523 143322360 - MGP_CBAJ_P0074174 Rimbp2 protein_coding protein_coding MGP_CBAJ_T0074175.1 MGP_CBAJ_G0029785.1 mouse_genomes_project 5 143257527 143322313 - MGP_CBAJ_P0074175 Rimbp2 protein_coding protein_coding MGP_CBAJ_T0074176.1 MGP_CBAJ_G0029785.1 mouse_genomes_project 5 143260134 143481983 - MGP_CBAJ_P0074176 Rimbp2 protein_coding protein_coding MGP_CBAJ_T0074177.1 MGP_CBAJ_G0029785.1 mouse_genomes_project 5 143260134 143482286 - MGP_CBAJ_P0074177 Rimbp2 protein_coding protein_coding MGP_CBAJ_T0074178.1 MGP_CBAJ_G0029785.1 mouse_genomes_project 5 143260415 143482410 - MGP_CBAJ_P0074178 Rimbp2 protein_coding protein_coding MGP_CBAJ_T0074179.1 MGP_CBAJ_G0029785.1 mouse_genomes_project 5 143308774 143397542 - MGP_CBAJ_P0074179 Rimbp2 protein_coding protein_coding MGP_CBAJ_T0074180.1 MGP_CBAJ_G0029785.1 mouse_genomes_project 5 143342409 143481961 - Rimbp2 protein_coding processed_transcript MGP_CBAJ_T0014920.1 MGP_CBAJ_G0013032.1 mouse_genomes_project 5 129499966 129500547 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014790.1 MGP_CBAJ_G0012902.1 mouse_genomes_project 5 68611064 68613096 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0071599.1 MGP_CBAJ_G0029270.1 mouse_genomes_project 5 74129275 74390203 - MGP_CBAJ_P0071599 Kctd8 protein_coding protein_coding MGP_CBAJ_T0071600.1 MGP_CBAJ_G0029270.1 mouse_genomes_project 5 74341236 74390201 - MGP_CBAJ_P0071600 Kctd8 protein_coding protein_coding MGP_CBAJ_T0073287.1 MGP_CBAJ_G0029629.1 mouse_genomes_project 5 127464256 127472191 - MGP_CBAJ_P0073287 Gatc protein_coding protein_coding MGP_CBAJ_T0070243.1 MGP_CBAJ_G0029052.1 mouse_genomes_project 5 30450020 30468772 - MGP_CBAJ_P0070243 Adgrf3 protein_coding protein_coding MGP_CBAJ_T0070244.1 MGP_CBAJ_G0029052.1 mouse_genomes_project 5 30450024 30455648 - MGP_CBAJ_P0070244 Adgrf3 protein_coding protein_coding MGP_CBAJ_T0070245.1 MGP_CBAJ_G0029052.1 mouse_genomes_project 5 30461540 30467637 - Adgrf3 protein_coding processed_transcript MGP_CBAJ_T0001573.1 MGP_CBAJ_G0001493.1 mouse_genomes_project 5 61521343 61522810 + TEC TEC MGP_CBAJ_T0001835.1 MGP_CBAJ_G0001752.1 mouse_genomes_project 5 148535119 148536041 + TEC TEC MGP_CBAJ_T0100636.1 MGP_CBAJ_G0038891.1 mouse_genomes_project 5 122041125 122041258 - Gm26079 snoRNA snoRNA MGP_CBAJ_T0075147.1 MGP_CBAJ_G0029971.1 mouse_genomes_project 5 157358620 157401039 - MGP_CBAJ_P0075147 Iqce protein_coding protein_coding MGP_CBAJ_T0075148.1 MGP_CBAJ_G0029971.1 mouse_genomes_project 5 157360298 157363030 - Iqce protein_coding retained_intron MGP_CBAJ_T0075149.1 MGP_CBAJ_G0029971.1 mouse_genomes_project 5 157360298 157400926 - Iqce protein_coding retained_intron MGP_CBAJ_T0075150.1 MGP_CBAJ_G0029971.1 mouse_genomes_project 5 157362068 157401000 - MGP_CBAJ_P0075150 Iqce protein_coding protein_coding MGP_CBAJ_T0075151.1 MGP_CBAJ_G0029971.1 mouse_genomes_project 5 157362817 157381229 - MGP_CBAJ_P0075151 Iqce protein_coding protein_coding MGP_CBAJ_T0075152.1 MGP_CBAJ_G0029971.1 mouse_genomes_project 5 157362946 157366094 - Iqce protein_coding retained_intron MGP_CBAJ_T0075153.1 MGP_CBAJ_G0029971.1 mouse_genomes_project 5 157380767 157387623 - Iqce protein_coding retained_intron MGP_CBAJ_T0075154.1 MGP_CBAJ_G0029971.1 mouse_genomes_project 5 157381543 157400937 - Iqce protein_coding retained_intron MGP_CBAJ_T0075155.1 MGP_CBAJ_G0029971.1 mouse_genomes_project 5 157387619 157400630 - Iqce protein_coding processed_transcript MGP_CBAJ_T0075156.1 MGP_CBAJ_G0029971.1 mouse_genomes_project 5 157387624 157401039 - MGP_CBAJ_P0075156 Iqce protein_coding protein_coding MGP_CBAJ_T0075157.1 MGP_CBAJ_G0029971.1 mouse_genomes_project 5 157390441 157400961 - MGP_CBAJ_P0075157 Iqce protein_coding protein_coding MGP_CBAJ_T0075158.1 MGP_CBAJ_G0029971.1 mouse_genomes_project 5 157390839 157400955 - Iqce protein_coding retained_intron MGP_CBAJ_T0074050.1 MGP_CBAJ_G0029759.1 mouse_genomes_project 5 138490134 138505476 - MGP_CBAJ_P0074050 Rilpl2 protein_coding protein_coding MGP_CBAJ_T0074051.1 MGP_CBAJ_G0029759.1 mouse_genomes_project 5 138502388 138505420 - Rilpl2 protein_coding retained_intron MGP_CBAJ_T0098051.1 MGP_CBAJ_G0036324.1 mouse_genomes_project 5 21704842 21704955 - n-R5s170 rRNA rRNA MGP_CBAJ_T0073578.1 MGP_CBAJ_G0029690.1 mouse_genomes_project 5 134766417 134794444 - MGP_CBAJ_P0073578 Erp29 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073581.1 MGP_CBAJ_G0029690.1 mouse_genomes_project 5 134782777 134794463 - MGP_CBAJ_P0073581 Erp29 protein_coding protein_coding MGP_CBAJ_T0073582.1 MGP_CBAJ_G0029690.1 mouse_genomes_project 5 134786710 134794453 - MGP_CBAJ_P0073582 Erp29 protein_coding protein_coding MGP_CBAJ_T0073583.1 MGP_CBAJ_G0029690.1 mouse_genomes_project 5 134787195 134794305 - MGP_CBAJ_P0073583 Erp29 protein_coding nonsense_mediated_decay MGP_CBAJ_T0008265.1 MGP_CBAJ_G0006705.1 mouse_genomes_project 5 140102119 140129259 + 1700048F04Rik lincRNA lincRNA MGP_CBAJ_T0008068.1 MGP_CBAJ_G0006568.1 mouse_genomes_project 5 81137153 81154218 - Gm42800 lincRNA lincRNA MGP_CBAJ_T0070009.1 MGP_CBAJ_G0029004.1 mouse_genomes_project 5 23986158 23998761 + MGP_CBAJ_P0070009 Abcb8 protein_coding protein_coding MGP_CBAJ_T0070010.1 MGP_CBAJ_G0029004.1 mouse_genomes_project 5 23986171 24008593 + MGP_CBAJ_P0070010 Abcb8 protein_coding protein_coding MGP_CBAJ_T0070011.1 MGP_CBAJ_G0029004.1 mouse_genomes_project 5 23986648 24008484 + MGP_CBAJ_P0070011 Abcb8 protein_coding protein_coding MGP_CBAJ_T0070012.1 MGP_CBAJ_G0029004.1 mouse_genomes_project 5 23986889 24002516 + Abcb8 protein_coding processed_transcript MGP_CBAJ_T0070013.1 MGP_CBAJ_G0029004.1 mouse_genomes_project 5 23986901 23999204 + Abcb8 protein_coding retained_intron MGP_CBAJ_T0070014.1 MGP_CBAJ_G0029004.1 mouse_genomes_project 5 23999136 24008486 + MGP_CBAJ_P0070014 Abcb8 protein_coding protein_coding MGP_CBAJ_T0070015.1 MGP_CBAJ_G0029004.1 mouse_genomes_project 5 24000792 24005250 + Abcb8 protein_coding retained_intron MGP_CBAJ_T0070016.1 MGP_CBAJ_G0029004.1 mouse_genomes_project 5 24004353 24008485 + Abcb8 protein_coding retained_intron MGP_CBAJ_T0070017.1 MGP_CBAJ_G0029004.1 mouse_genomes_project 5 24004946 24008463 + MGP_CBAJ_P0070017 Abcb8 protein_coding protein_coding MGP_CBAJ_T0075195.1 MGP_CBAJ_G0029980.1 mouse_genomes_project 5 159441223 159445462 - MGP_CBAJ_P0075195 Papolb protein_coding protein_coding MGP_CBAJ_T0001754.1 MGP_CBAJ_G0001672.1 mouse_genomes_project 5 131403586 131405249 + TEC TEC MGP_CBAJ_T0100605.1 MGP_CBAJ_G0038860.1 mouse_genomes_project 5 57908405 57908534 + Gm24235 snoRNA snoRNA MGP_CBAJ_T0071361.1 MGP_CBAJ_G0029234.1 mouse_genomes_project 5 68413980 68462315 + MGP_CBAJ_P0071361 Pgm1 protein_coding protein_coding MGP_CBAJ_T0071362.1 MGP_CBAJ_G0029234.1 mouse_genomes_project 5 68427682 68440674 + MGP_CBAJ_P0071362 Pgm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071363.1 MGP_CBAJ_G0029234.1 mouse_genomes_project 5 68436513 68438390 + Pgm1 protein_coding retained_intron MGP_CBAJ_T0071364.1 MGP_CBAJ_G0029234.1 mouse_genomes_project 5 68445624 68462128 + MGP_CBAJ_P0071364 Pgm1 protein_coding protein_coding MGP_CBAJ_T0074308.1 MGP_CBAJ_G0029810.1 mouse_genomes_project 5 145095679 145676813 + MGP_CBAJ_P0074308 Caln1 protein_coding protein_coding MGP_CBAJ_T0074311.1 MGP_CBAJ_G0029810.1 mouse_genomes_project 5 145115764 145272866 + MGP_CBAJ_P0074311 Caln1 protein_coding protein_coding MGP_CBAJ_T0074312.1 MGP_CBAJ_G0029810.1 mouse_genomes_project 5 145197821 145403648 + MGP_CBAJ_P0074312 Caln1 protein_coding protein_coding MGP_CBAJ_T0074313.1 MGP_CBAJ_G0029810.1 mouse_genomes_project 5 145198384 145677275 + MGP_CBAJ_P0074313 Caln1 protein_coding protein_coding MGP_CBAJ_T0074314.1 MGP_CBAJ_G0029810.1 mouse_genomes_project 5 145199173 145687893 + MGP_CBAJ_P0074314 Caln1 protein_coding protein_coding MGP_CBAJ_T0073989.1 MGP_CBAJ_G0029752.1 mouse_genomes_project 5 138095055 138096009 + MGP_CBAJ_P0073989 Arl6ip4 protein_coding protein_coding MGP_CBAJ_T0073990.1 MGP_CBAJ_G0029752.1 mouse_genomes_project 5 138095065 138097163 + MGP_CBAJ_P0073990 Arl6ip4 protein_coding protein_coding MGP_CBAJ_T0073991.1 MGP_CBAJ_G0029752.1 mouse_genomes_project 5 138095088 138097063 + MGP_CBAJ_P0073991 Arl6ip4 protein_coding protein_coding MGP_CBAJ_T0073992.1 MGP_CBAJ_G0029752.1 mouse_genomes_project 5 138095645 138097001 + MGP_CBAJ_P0073992 Arl6ip4 protein_coding protein_coding MGP_CBAJ_T0073993.1 MGP_CBAJ_G0029752.1 mouse_genomes_project 5 138096277 138097158 + MGP_CBAJ_P0073993 Arl6ip4 protein_coding protein_coding MGP_CBAJ_T0014895.1 MGP_CBAJ_G0013007.1 mouse_genomes_project 5 119706292 119707010 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008219.1 MGP_CBAJ_G0006672.1 mouse_genomes_project 5 128598356 128602035 - Gm13838 lincRNA lincRNA MGP_CBAJ_T0014865.1 MGP_CBAJ_G0012977.1 mouse_genomes_project 5 110021481 110021834 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008175.1 MGP_CBAJ_G0006647.1 mouse_genomes_project 5 122134148 122135401 + Gm26515 lincRNA lincRNA MGP_CBAJ_T0014944.1 MGP_CBAJ_G0013056.1 mouse_genomes_project 5 152584620 152585016 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014722.1 MGP_CBAJ_G0012834.1 mouse_genomes_project 5 34887910 34888367 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0074783.1 MGP_CBAJ_G0029893.1 mouse_genomes_project 5 153401824 153419160 + MGP_CBAJ_P0074783 protein_coding unknown_likely_coding MGP_CBAJ_T0074784.1 MGP_CBAJ_G0029893.1 mouse_genomes_project 5 153409778 153411607 + MGP_CBAJ_P0074784 protein_coding protein_coding MGP_CBAJ_T0073721.1 MGP_CBAJ_G0029712.1 mouse_genomes_project 5 135970978 135978756 - MGP_CBAJ_P0073721 Fam216a protein_coding protein_coding MGP_CBAJ_T0014637.1 MGP_CBAJ_G0012749.1 mouse_genomes_project 5 5505129 5505421 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004736.1 MGP_CBAJ_G0004078.1 mouse_genomes_project 5 135553104 135557462 + Gm3970 antisense antisense MGP_CBAJ_T0001805.1 MGP_CBAJ_G0001722.1 mouse_genomes_project 5 144821713 144822211 + TEC TEC MGP_CBAJ_T0072035.1 MGP_CBAJ_G0029358.1 mouse_genomes_project 5 95187173 95194176 - MGP_CBAJ_P0072035 Csn2 protein_coding protein_coding MGP_CBAJ_T0072036.1 MGP_CBAJ_G0029358.1 mouse_genomes_project 5 95187174 95193955 - Csn2 protein_coding retained_intron MGP_CBAJ_T0072037.1 MGP_CBAJ_G0029358.1 mouse_genomes_project 5 95187177 95191202 - Csn2 protein_coding retained_intron MGP_CBAJ_T0072038.1 MGP_CBAJ_G0029358.1 mouse_genomes_project 5 95187177 95193971 - MGP_CBAJ_P0072038 Csn2 protein_coding protein_coding MGP_CBAJ_T0072039.1 MGP_CBAJ_G0029358.1 mouse_genomes_project 5 95187354 95193955 - MGP_CBAJ_P0072039 Csn2 protein_coding protein_coding MGP_CBAJ_T0072040.1 MGP_CBAJ_G0029358.1 mouse_genomes_project 5 95187418 95193967 - MGP_CBAJ_P0072040 Csn2 protein_coding protein_coding MGP_CBAJ_T0072041.1 MGP_CBAJ_G0029358.1 mouse_genomes_project 5 95187478 95193967 - MGP_CBAJ_P0072041 Csn2 protein_coding protein_coding MGP_CBAJ_T0072042.1 MGP_CBAJ_G0029358.1 mouse_genomes_project 5 95188385 95192638 - MGP_CBAJ_P0072042 Csn2 protein_coding protein_coding MGP_CBAJ_T0072043.1 MGP_CBAJ_G0029358.1 mouse_genomes_project 5 95189109 95191077 - Csn2 protein_coding processed_transcript MGP_CBAJ_T0072044.1 MGP_CBAJ_G0029358.1 mouse_genomes_project 5 95192354 95193967 - Csn2 protein_coding retained_intron MGP_CBAJ_T0072045.1 MGP_CBAJ_G0029358.1 mouse_genomes_project 5 95192438 95193967 - Csn2 protein_coding retained_intron MGP_CBAJ_T0008151.1 MGP_CBAJ_G0006632.1 mouse_genomes_project 5 116696617 116701819 - Gm26872 lincRNA lincRNA MGP_CBAJ_T0008174.1 MGP_CBAJ_G0006646.1 mouse_genomes_project 5 122010519 122012126 + Gm42595 lincRNA lincRNA MGP_CBAJ_T0100598.1 MGP_CBAJ_G0038853.1 mouse_genomes_project 5 17705967 17706095 + Gm23822 snoRNA snoRNA MGP_CBAJ_T0008305.1 MGP_CBAJ_G0006728.1 mouse_genomes_project 5 150272955 150273808 + 4933439J24Rik lincRNA lincRNA MGP_CBAJ_T0014850.1 MGP_CBAJ_G0012962.1 mouse_genomes_project 5 99888156 99889036 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0075112.1 MGP_CBAJ_G0029961.1 mouse_genomes_project 5 156482837 156573745 + MGP_CBAJ_P0075112 Elfn1 protein_coding protein_coding MGP_CBAJ_T0075113.1 MGP_CBAJ_G0029961.1 mouse_genomes_project 5 156483368 156570063 + Elfn1 protein_coding processed_transcript MGP_CBAJ_T0099388.1 MGP_CBAJ_G0037643.1 mouse_genomes_project 5 125709087 125709168 - Gm22056 snRNA snRNA MGP_CBAJ_T0001479.1 MGP_CBAJ_G0001400.1 mouse_genomes_project 5 39396191 39397599 - TEC TEC MGP_CBAJ_T0001522.1 MGP_CBAJ_G0001443.1 mouse_genomes_project 5 51058503 51062305 - TEC TEC MGP_CBAJ_T0074081.1 MGP_CBAJ_G0029766.1 mouse_genomes_project 5 138669673 138678512 + Atp6v0a2 protein_coding processed_transcript MGP_CBAJ_T0074082.1 MGP_CBAJ_G0029766.1 mouse_genomes_project 5 138670143 138703696 + MGP_CBAJ_P0074082 Atp6v0a2 protein_coding protein_coding MGP_CBAJ_T0074083.1 MGP_CBAJ_G0029766.1 mouse_genomes_project 5 138670156 138701381 + MGP_CBAJ_P0074083 Atp6v0a2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074084.1 MGP_CBAJ_G0029766.1 mouse_genomes_project 5 138670260 138682591 + Atp6v0a2 protein_coding retained_intron MGP_CBAJ_T0074085.1 MGP_CBAJ_G0029766.1 mouse_genomes_project 5 138693376 138697135 + Atp6v0a2 protein_coding processed_transcript MGP_CBAJ_T0074086.1 MGP_CBAJ_G0029766.1 mouse_genomes_project 5 138694947 138702842 + Atp6v0a2 protein_coding retained_intron MGP_CBAJ_T0074087.1 MGP_CBAJ_G0029766.1 mouse_genomes_project 5 138697438 138701058 + MGP_CBAJ_P0074087 Atp6v0a2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071883.1 MGP_CBAJ_G0029320.1 mouse_genomes_project 5 82915770 82950664 + MGP_CBAJ_P0071883 Srp72 protein_coding protein_coding MGP_CBAJ_T0071884.1 MGP_CBAJ_G0029320.1 mouse_genomes_project 5 82915794 82949543 + MGP_CBAJ_P0071884 Srp72 protein_coding protein_coding MGP_CBAJ_T0071885.1 MGP_CBAJ_G0029320.1 mouse_genomes_project 5 82915808 82928357 + Srp72 protein_coding retained_intron MGP_CBAJ_T0071886.1 MGP_CBAJ_G0029320.1 mouse_genomes_project 5 82928345 82930482 + Srp72 protein_coding retained_intron MGP_CBAJ_T0071887.1 MGP_CBAJ_G0029320.1 mouse_genomes_project 5 82931862 82945877 + Srp72 protein_coding retained_intron MGP_CBAJ_T0071888.1 MGP_CBAJ_G0029320.1 mouse_genomes_project 5 82944723 82945634 + Srp72 protein_coding retained_intron MGP_CBAJ_T0071889.1 MGP_CBAJ_G0029320.1 mouse_genomes_project 5 82945986 82948216 + Srp72 protein_coding retained_intron MGP_CBAJ_T0071890.1 MGP_CBAJ_G0029320.1 mouse_genomes_project 5 82947701 82950664 + Srp72 protein_coding retained_intron MGP_CBAJ_T0071891.1 MGP_CBAJ_G0029320.1 mouse_genomes_project 5 82948131 82949068 + Srp72 protein_coding retained_intron MGP_CBAJ_T0008043.1 MGP_CBAJ_G0006550.1 mouse_genomes_project 5 68825039 68867815 + Gm31363 lincRNA lincRNA MGP_CBAJ_T0099360.1 MGP_CBAJ_G0037615.1 mouse_genomes_project 5 78390646 78390732 - Gm24776 snRNA snRNA MGP_CBAJ_T0070038.1 MGP_CBAJ_G0029008.1 mouse_genomes_project 5 24047350 24054105 - MGP_CBAJ_P0070038 Fastk protein_coding protein_coding MGP_CBAJ_T0070039.1 MGP_CBAJ_G0029008.1 mouse_genomes_project 5 24047351 24054097 - Fastk protein_coding retained_intron MGP_CBAJ_T0070041.1 MGP_CBAJ_G0029008.1 mouse_genomes_project 5 24049949 24051126 - Fastk protein_coding retained_intron MGP_CBAJ_T0070042.1 MGP_CBAJ_G0029008.1 mouse_genomes_project 5 24049949 24054117 - MGP_CBAJ_P0070042 Fastk protein_coding nonsense_mediated_decay MGP_CBAJ_T0070043.1 MGP_CBAJ_G0029008.1 mouse_genomes_project 5 24049949 24054198 - MGP_CBAJ_P0070043 Fastk protein_coding protein_coding MGP_CBAJ_T0070044.1 MGP_CBAJ_G0029008.1 mouse_genomes_project 5 24049950 24054098 - Fastk protein_coding retained_intron MGP_CBAJ_T0070045.1 MGP_CBAJ_G0029008.1 mouse_genomes_project 5 24049950 24050435 - Fastk protein_coding retained_intron MGP_CBAJ_T0070046.1 MGP_CBAJ_G0029008.1 mouse_genomes_project 5 24049953 24054119 - MGP_CBAJ_P0070046 Fastk protein_coding protein_coding MGP_CBAJ_T0070047.1 MGP_CBAJ_G0029008.1 mouse_genomes_project 5 24050438 24051012 - Fastk protein_coding retained_intron MGP_CBAJ_T0070048.1 MGP_CBAJ_G0029008.1 mouse_genomes_project 5 24050530 24051209 - Fastk protein_coding processed_transcript MGP_CBAJ_T0070049.1 MGP_CBAJ_G0029008.1 mouse_genomes_project 5 24050834 24052869 - Fastk protein_coding retained_intron MGP_CBAJ_T0070050.1 MGP_CBAJ_G0029008.1 mouse_genomes_project 5 24050981 24054149 - Fastk protein_coding processed_transcript MGP_CBAJ_T0070051.1 MGP_CBAJ_G0029008.1 mouse_genomes_project 5 24052211 24054119 - Fastk protein_coding retained_intron MGP_CBAJ_T0070052.1 MGP_CBAJ_G0029008.1 mouse_genomes_project 5 24052279 24054108 - Fastk protein_coding processed_transcript MGP_CBAJ_T0070053.1 MGP_CBAJ_G0029008.1 mouse_genomes_project 5 24052841 24054108 - Fastk protein_coding processed_transcript MGP_CBAJ_T0075280.1 MGP_CBAJ_G0029997.1 mouse_genomes_project 5 160471864 160512537 + MGP_CBAJ_P0075280 Grid2ip protein_coding protein_coding MGP_CBAJ_T0075281.1 MGP_CBAJ_G0029997.1 mouse_genomes_project 5 160478388 160512867 + MGP_CBAJ_P0075281 Grid2ip protein_coding protein_coding MGP_CBAJ_T0075282.1 MGP_CBAJ_G0029997.1 mouse_genomes_project 5 160488112 160513221 + MGP_CBAJ_P0075282 Grid2ip protein_coding protein_coding MGP_CBAJ_T0075283.1 MGP_CBAJ_G0029997.1 mouse_genomes_project 5 160490989 160493751 + Grid2ip protein_coding retained_intron MGP_CBAJ_T0075284.1 MGP_CBAJ_G0029997.1 mouse_genomes_project 5 160493478 160501855 + Grid2ip protein_coding retained_intron MGP_CBAJ_T0001665.1 MGP_CBAJ_G0001583.1 mouse_genomes_project 5 82133926 82138102 - TEC TEC MGP_CBAJ_T0070841.1 MGP_CBAJ_G0029141.1 mouse_genomes_project 5 36019374 36026293 + MGP_CBAJ_P0070841 Hgfac protein_coding protein_coding MGP_CBAJ_T0070842.1 MGP_CBAJ_G0029141.1 mouse_genomes_project 5 36019442 36026330 + Hgfac protein_coding retained_intron MGP_CBAJ_T0070843.1 MGP_CBAJ_G0029141.1 mouse_genomes_project 5 36019442 36021551 + MGP_CBAJ_P0070843 Hgfac protein_coding protein_coding MGP_CBAJ_T0070844.1 MGP_CBAJ_G0029141.1 mouse_genomes_project 5 36021475 36023315 + Hgfac protein_coding retained_intron MGP_CBAJ_T0070845.1 MGP_CBAJ_G0029141.1 mouse_genomes_project 5 36022217 36024832 + MGP_CBAJ_P0070845 Hgfac protein_coding protein_coding MGP_CBAJ_T0070846.1 MGP_CBAJ_G0029141.1 mouse_genomes_project 5 36022694 36023780 + Hgfac protein_coding retained_intron MGP_CBAJ_T0070847.1 MGP_CBAJ_G0029141.1 mouse_genomes_project 5 36024433 36026275 + Hgfac protein_coding retained_intron MGP_CBAJ_T0007941.1 MGP_CBAJ_G0006478.1 mouse_genomes_project 5 8116715 8170414 + lincRNA lincRNA MGP_CBAJ_T0069905.1 MGP_CBAJ_G0028985.1 mouse_genomes_project 5 20953090 20974682 + MGP_CBAJ_P0069905 Pmpcb protein_coding protein_coding MGP_CBAJ_T0069906.1 MGP_CBAJ_G0028985.1 mouse_genomes_project 5 20955006 20974677 + Pmpcb protein_coding retained_intron MGP_CBAJ_T0069907.1 MGP_CBAJ_G0028985.1 mouse_genomes_project 5 20956731 20958919 + Pmpcb protein_coding retained_intron MGP_CBAJ_T0069908.1 MGP_CBAJ_G0028985.1 mouse_genomes_project 5 20960589 20961387 + Pmpcb protein_coding retained_intron MGP_CBAJ_T0069909.1 MGP_CBAJ_G0028985.1 mouse_genomes_project 5 20974043 20974671 + Pmpcb protein_coding retained_intron MGP_CBAJ_T0069910.1 MGP_CBAJ_G0028985.1 mouse_genomes_project 5 20974169 20974677 + MGP_CBAJ_P0069910 Pmpcb protein_coding nonsense_mediated_decay MGP_CBAJ_T0069911.1 MGP_CBAJ_G0028985.1 mouse_genomes_project 5 20974305 20974671 + Pmpcb protein_coding retained_intron MGP_CBAJ_T0071010.1 MGP_CBAJ_G0029173.1 mouse_genomes_project 5 39398721 39421448 - MGP_CBAJ_P0071010 Nsg1 protein_coding protein_coding MGP_CBAJ_T0071011.1 MGP_CBAJ_G0029173.1 mouse_genomes_project 5 39399664 39400359 - MGP_CBAJ_P0071011 Nsg1 protein_coding protein_coding MGP_CBAJ_T0071012.1 MGP_CBAJ_G0029173.1 mouse_genomes_project 5 39399785 39420572 - MGP_CBAJ_P0071012 Nsg1 protein_coding protein_coding MGP_CBAJ_T0071013.1 MGP_CBAJ_G0029173.1 mouse_genomes_project 5 39400072 39420946 - MGP_CBAJ_P0071013 Nsg1 protein_coding protein_coding MGP_CBAJ_T0071014.1 MGP_CBAJ_G0029173.1 mouse_genomes_project 5 39406243 39420903 - MGP_CBAJ_P0071014 Nsg1 protein_coding protein_coding MGP_CBAJ_T0071015.1 MGP_CBAJ_G0029173.1 mouse_genomes_project 5 39416874 39421014 - Nsg1 protein_coding retained_intron MGP_CBAJ_T0071016.1 MGP_CBAJ_G0029173.1 mouse_genomes_project 5 39420446 39420946 - MGP_CBAJ_P0071016 Nsg1 protein_coding protein_coding MGP_CBAJ_T0098415.1 MGP_CBAJ_G0036681.1 mouse_genomes_project 5 127692613 127693298 + Gm13840 sense_intronic sense_intronic MGP_CBAJ_T0008061.1 MGP_CBAJ_G0006562.1 mouse_genomes_project 5 79498724 79506229 + Gm43801 lincRNA lincRNA MGP_CBAJ_T0001685.1 MGP_CBAJ_G0001603.1 mouse_genomes_project 5 105902220 105902740 + TEC TEC MGP_CBAJ_T0001806.1 MGP_CBAJ_G0001723.1 mouse_genomes_project 5 144927268 144928707 + TEC TEC MGP_CBAJ_T0070192.1 MGP_CBAJ_G0029042.1 mouse_genomes_project 5 29592527 29597954 - MGP_CBAJ_P0070192 Mnx1 protein_coding protein_coding MGP_CBAJ_T0070193.1 MGP_CBAJ_G0029042.1 mouse_genomes_project 5 29592754 29597954 - MGP_CBAJ_P0070193 Mnx1 protein_coding protein_coding MGP_CBAJ_T0069957.1 MGP_CBAJ_G0028994.1 mouse_genomes_project 5 22959038 23081576 - MGP_CBAJ_P0069957 Srpk2 protein_coding protein_coding MGP_CBAJ_T0069958.1 MGP_CBAJ_G0028994.1 mouse_genomes_project 5 22961226 23147842 - MGP_CBAJ_P0069958 Srpk2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069959.1 MGP_CBAJ_G0028994.1 mouse_genomes_project 5 22983399 23001854 - Srpk2 protein_coding processed_transcript MGP_CBAJ_T0069960.1 MGP_CBAJ_G0028994.1 mouse_genomes_project 5 22985615 23144170 - MGP_CBAJ_P0069960 Srpk2 protein_coding protein_coding MGP_CBAJ_T0069961.1 MGP_CBAJ_G0028994.1 mouse_genomes_project 5 23005823 23144123 - Srpk2 protein_coding retained_intron MGP_CBAJ_T0069962.1 MGP_CBAJ_G0028994.1 mouse_genomes_project 5 23008242 23010661 - Srpk2 protein_coding retained_intron MGP_CBAJ_T0069963.1 MGP_CBAJ_G0028994.1 mouse_genomes_project 5 23008640 23158529 - MGP_CBAJ_P0069963 Srpk2 protein_coding protein_coding MGP_CBAJ_T0069964.1 MGP_CBAJ_G0028994.1 mouse_genomes_project 5 23026497 23147749 - MGP_CBAJ_P0069964 Srpk2 protein_coding protein_coding MGP_CBAJ_T0069965.1 MGP_CBAJ_G0028994.1 mouse_genomes_project 5 23026602 23158512 - MGP_CBAJ_P0069965 Srpk2 protein_coding protein_coding MGP_CBAJ_T0069966.1 MGP_CBAJ_G0028994.1 mouse_genomes_project 5 23079771 23081597 - Srpk2 protein_coding retained_intron MGP_CBAJ_T0070267.1 MGP_CBAJ_G0029057.1 mouse_genomes_project 5 30758893 30830327 - MGP_CBAJ_P0070267 Cib4 protein_coding protein_coding MGP_CBAJ_T0070735.1 MGP_CBAJ_G0029129.1 mouse_genomes_project 5 35167037 35200663 + MGP_CBAJ_P0070735 unknown_likely_coding unknown_likely_coding MGP_CBAJ_T0074106.1 MGP_CBAJ_G0029771.1 mouse_genomes_project 5 139054015 139240724 - MGP_CBAJ_P0074106 Ncor2 protein_coding protein_coding MGP_CBAJ_T0074107.1 MGP_CBAJ_G0029771.1 mouse_genomes_project 5 139054015 139240724 - MGP_CBAJ_P0074107 Ncor2 protein_coding protein_coding MGP_CBAJ_T0074108.1 MGP_CBAJ_G0029771.1 mouse_genomes_project 5 139054015 139082631 - MGP_CBAJ_P0074108 Ncor2 protein_coding protein_coding MGP_CBAJ_T0074109.1 MGP_CBAJ_G0029771.1 mouse_genomes_project 5 139054017 139240724 - MGP_CBAJ_P0074109 Ncor2 protein_coding protein_coding MGP_CBAJ_T0074110.1 MGP_CBAJ_G0029771.1 mouse_genomes_project 5 139054024 139240651 - MGP_CBAJ_P0074110 Ncor2 protein_coding protein_coding MGP_CBAJ_T0074111.1 MGP_CBAJ_G0029771.1 mouse_genomes_project 5 139054697 139240724 - MGP_CBAJ_P0074111 Ncor2 protein_coding protein_coding MGP_CBAJ_T0074112.1 MGP_CBAJ_G0029771.1 mouse_genomes_project 5 139054697 139170436 - MGP_CBAJ_P0074112 Ncor2 protein_coding protein_coding MGP_CBAJ_T0074113.1 MGP_CBAJ_G0029771.1 mouse_genomes_project 5 139054754 139065336 - MGP_CBAJ_P0074113 Ncor2 protein_coding protein_coding MGP_CBAJ_T0074114.1 MGP_CBAJ_G0029771.1 mouse_genomes_project 5 139054996 139064875 - MGP_CBAJ_P0074114 Ncor2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074115.1 MGP_CBAJ_G0029771.1 mouse_genomes_project 5 139055094 139063033 - Ncor2 protein_coding retained_intron MGP_CBAJ_T0074116.1 MGP_CBAJ_G0029771.1 mouse_genomes_project 5 139064909 139066729 - MGP_CBAJ_P0074116 Ncor2 protein_coding protein_coding MGP_CBAJ_T0074117.1 MGP_CBAJ_G0029771.1 mouse_genomes_project 5 139064915 139065901 - Ncor2 protein_coding retained_intron MGP_CBAJ_T0074118.1 MGP_CBAJ_G0029771.1 mouse_genomes_project 5 139070620 139101472 - MGP_CBAJ_P0074118 Ncor2 protein_coding protein_coding MGP_CBAJ_T0074119.1 MGP_CBAJ_G0029771.1 mouse_genomes_project 5 139090857 139099053 - Ncor2 protein_coding retained_intron MGP_CBAJ_T0074120.1 MGP_CBAJ_G0029771.1 mouse_genomes_project 5 139094008 139101483 - MGP_CBAJ_P0074120 Ncor2 protein_coding protein_coding MGP_CBAJ_T0072570.1 MGP_CBAJ_G0029488.1 mouse_genomes_project 5 115050270 115146600 - protein_coding retained_intron MGP_CBAJ_T0072574.1 MGP_CBAJ_G0029488.1 mouse_genomes_project 5 115121149 115146599 - MGP_CBAJ_P0072574 protein_coding protein_coding MGP_CBAJ_T0072575.1 MGP_CBAJ_G0029488.1 mouse_genomes_project 5 115122002 115177730 - MGP_CBAJ_P0072575 protein_coding protein_coding MGP_CBAJ_T0072576.1 MGP_CBAJ_G0029488.1 mouse_genomes_project 5 115122839 115126574 - protein_coding processed_transcript MGP_CBAJ_T0072077.1 MGP_CBAJ_G0029369.1 mouse_genomes_project 5 95712145 95713109 - MGP_CBAJ_P0072077 Gm11116 protein_coding protein_coding MGP_CBAJ_T0073040.1 MGP_CBAJ_G0029581.1 mouse_genomes_project 5 125244776 125247570 + Wscd2 protein_coding retained_intron MGP_CBAJ_T0073041.1 MGP_CBAJ_G0029581.1 mouse_genomes_project 5 125244890 125344469 + MGP_CBAJ_P0073041 Wscd2 protein_coding protein_coding MGP_CBAJ_T0073042.1 MGP_CBAJ_G0029581.1 mouse_genomes_project 5 125245195 125305659 + Wscd2 protein_coding retained_intron MGP_CBAJ_T0073043.1 MGP_CBAJ_G0029581.1 mouse_genomes_project 5 125301024 125307553 + Wscd2 protein_coding retained_intron MGP_CBAJ_T0073044.1 MGP_CBAJ_G0029581.1 mouse_genomes_project 5 125322451 125344462 + Wscd2 protein_coding processed_transcript MGP_CBAJ_T0073045.1 MGP_CBAJ_G0029581.1 mouse_genomes_project 5 125330803 125333910 + Wscd2 protein_coding processed_transcript MGP_CBAJ_T0014758.1 MGP_CBAJ_G0012870.1 mouse_genomes_project 5 58100419 58101248 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0073076.1 MGP_CBAJ_G0029589.1 mouse_genomes_project 5 125610652 125686417 - MGP_CBAJ_P0073076 Coro1c protein_coding nonsense_mediated_decay MGP_CBAJ_T0073077.1 MGP_CBAJ_G0029589.1 mouse_genomes_project 5 125610652 125686470 - MGP_CBAJ_P0073077 Coro1c protein_coding protein_coding MGP_CBAJ_T0073078.1 MGP_CBAJ_G0029589.1 mouse_genomes_project 5 125613465 125619666 - Coro1c protein_coding retained_intron MGP_CBAJ_T0073079.1 MGP_CBAJ_G0029589.1 mouse_genomes_project 5 125613476 125618669 - Coro1c protein_coding retained_intron MGP_CBAJ_T0073080.1 MGP_CBAJ_G0029589.1 mouse_genomes_project 5 125614411 125615847 - Coro1c protein_coding retained_intron MGP_CBAJ_T0073081.1 MGP_CBAJ_G0029589.1 mouse_genomes_project 5 125616338 125618474 - Coro1c protein_coding retained_intron MGP_CBAJ_T0073082.1 MGP_CBAJ_G0029589.1 mouse_genomes_project 5 125616766 125645885 - Coro1c protein_coding processed_transcript MGP_CBAJ_T0073083.1 MGP_CBAJ_G0029589.1 mouse_genomes_project 5 125616825 125627587 - Coro1c protein_coding processed_transcript MGP_CBAJ_T0073084.1 MGP_CBAJ_G0029589.1 mouse_genomes_project 5 125634529 125654110 - MGP_CBAJ_P0073084 Coro1c protein_coding protein_coding MGP_CBAJ_T0073085.1 MGP_CBAJ_G0029589.1 mouse_genomes_project 5 125634587 125653596 - MGP_CBAJ_P0073085 Coro1c protein_coding protein_coding MGP_CBAJ_T0073086.1 MGP_CBAJ_G0029589.1 mouse_genomes_project 5 125648235 125686357 - Coro1c protein_coding retained_intron MGP_CBAJ_T0001703.1 MGP_CBAJ_G0001621.1 mouse_genomes_project 5 113894013 113896275 - TEC TEC MGP_CBAJ_T0017876.1 MGP_CBAJ_G0015335.1 mouse_genomes_project 5 32082484 32203170 + Gm43809 processed_transcript processed_transcript MGP_CBAJ_T0017877.1 MGP_CBAJ_G0015335.1 mouse_genomes_project 5 32101383 32203150 + Gm43809 processed_transcript processed_transcript MGP_CBAJ_T0014778.1 MGP_CBAJ_G0012890.1 mouse_genomes_project 5 65355024 65355862 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0070171.1 MGP_CBAJ_G0029039.1 mouse_genomes_project 5 29262328 29269472 + MGP_CBAJ_P0070171 Rnf32 protein_coding protein_coding MGP_CBAJ_T0070172.1 MGP_CBAJ_G0029039.1 mouse_genomes_project 5 29262329 29294733 + MGP_CBAJ_P0070172 Rnf32 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070173.1 MGP_CBAJ_G0029039.1 mouse_genomes_project 5 29262331 29265084 + MGP_CBAJ_P0070173 Rnf32 protein_coding protein_coding MGP_CBAJ_T0070174.1 MGP_CBAJ_G0029039.1 mouse_genomes_project 5 29262333 29294774 + MGP_CBAJ_P0070174 Rnf32 protein_coding protein_coding MGP_CBAJ_T0070175.1 MGP_CBAJ_G0029039.1 mouse_genomes_project 5 29262339 29269532 + MGP_CBAJ_P0070175 Rnf32 protein_coding protein_coding MGP_CBAJ_T0070176.1 MGP_CBAJ_G0029039.1 mouse_genomes_project 5 29262342 29294776 + MGP_CBAJ_P0070176 Rnf32 protein_coding protein_coding MGP_CBAJ_T0070177.1 MGP_CBAJ_G0029039.1 mouse_genomes_project 5 29262394 29273988 + Rnf32 protein_coding retained_intron MGP_CBAJ_T0070178.1 MGP_CBAJ_G0029039.1 mouse_genomes_project 5 29262420 29264328 + Rnf32 protein_coding processed_transcript MGP_CBAJ_T0070179.1 MGP_CBAJ_G0029039.1 mouse_genomes_project 5 29262923 29269421 + MGP_CBAJ_P0070179 Rnf32 protein_coding protein_coding MGP_CBAJ_T0070180.1 MGP_CBAJ_G0029039.1 mouse_genomes_project 5 29264342 29294543 + MGP_CBAJ_P0070180 Rnf32 protein_coding protein_coding MGP_CBAJ_T0070181.1 MGP_CBAJ_G0029039.1 mouse_genomes_project 5 29265007 29294553 + MGP_CBAJ_P0070181 Rnf32 protein_coding protein_coding MGP_CBAJ_T0070182.1 MGP_CBAJ_G0029039.1 mouse_genomes_project 5 29293037 29297709 + Rnf32 protein_coding retained_intron MGP_CBAJ_T0072685.1 MGP_CBAJ_G0029510.1 mouse_genomes_project 5 118106787 118115881 - MGP_CBAJ_P0072685 Gfi1 protein_coding protein_coding MGP_CBAJ_T0072686.1 MGP_CBAJ_G0029510.1 mouse_genomes_project 5 118106787 118114418 - MGP_CBAJ_P0072686 Gfi1 protein_coding protein_coding MGP_CBAJ_T0072687.1 MGP_CBAJ_G0029510.1 mouse_genomes_project 5 118106796 118115881 - MGP_CBAJ_P0072687 Gfi1 protein_coding protein_coding MGP_CBAJ_T0072688.1 MGP_CBAJ_G0029510.1 mouse_genomes_project 5 118107354 118114036 - MGP_CBAJ_P0072688 Gfi1 protein_coding protein_coding MGP_CBAJ_T0072689.1 MGP_CBAJ_G0029510.1 mouse_genomes_project 5 118111708 118116112 - MGP_CBAJ_P0072689 Gfi1 protein_coding protein_coding MGP_CBAJ_T0073171.1 MGP_CBAJ_G0029606.1 mouse_genomes_project 5 126667709 126682281 + MGP_CBAJ_P0073171 Tchp protein_coding protein_coding MGP_CBAJ_T0073172.1 MGP_CBAJ_G0029606.1 mouse_genomes_project 5 126667768 126669398 + Tchp protein_coding processed_transcript MGP_CBAJ_T0073173.1 MGP_CBAJ_G0029606.1 mouse_genomes_project 5 126667813 126682281 + Tchp protein_coding retained_intron MGP_CBAJ_T0073174.1 MGP_CBAJ_G0029606.1 mouse_genomes_project 5 126671024 126673862 + Tchp protein_coding retained_intron MGP_CBAJ_T0073175.1 MGP_CBAJ_G0029606.1 mouse_genomes_project 5 126674594 126679643 + MGP_CBAJ_P0073175 Tchp protein_coding protein_coding MGP_CBAJ_T0073176.1 MGP_CBAJ_G0029606.1 mouse_genomes_project 5 126674917 126682281 + Tchp protein_coding processed_transcript MGP_CBAJ_T0073177.1 MGP_CBAJ_G0029606.1 mouse_genomes_project 5 126677506 126678673 + Tchp protein_coding retained_intron MGP_CBAJ_T0073178.1 MGP_CBAJ_G0029606.1 mouse_genomes_project 5 126679637 126681112 + Tchp protein_coding retained_intron MGP_CBAJ_T0001542.1 MGP_CBAJ_G0001462.1 mouse_genomes_project 5 51849779 51852931 - TEC TEC MGP_CBAJ_T0075182.1 MGP_CBAJ_G0029978.1 mouse_genomes_project 5 159360254 159362865 + MGP_CBAJ_P0075182 Ap5z1 protein_coding protein_coding MGP_CBAJ_T0075183.1 MGP_CBAJ_G0029978.1 mouse_genomes_project 5 159360309 159375166 + Ap5z1 protein_coding processed_transcript MGP_CBAJ_T0075184.1 MGP_CBAJ_G0029978.1 mouse_genomes_project 5 159360354 159368309 + MGP_CBAJ_P0075184 Ap5z1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075185.1 MGP_CBAJ_G0029978.1 mouse_genomes_project 5 159360364 159381701 + MGP_CBAJ_P0075185 Ap5z1 protein_coding protein_coding MGP_CBAJ_T0075186.1 MGP_CBAJ_G0029978.1 mouse_genomes_project 5 159360371 159380793 + Ap5z1 protein_coding retained_intron MGP_CBAJ_T0075187.1 MGP_CBAJ_G0029978.1 mouse_genomes_project 5 159360384 159381045 + MGP_CBAJ_P0075187 Ap5z1 protein_coding protein_coding MGP_CBAJ_T0075188.1 MGP_CBAJ_G0029978.1 mouse_genomes_project 5 159377051 159378703 + Ap5z1 protein_coding retained_intron MGP_CBAJ_T0073414.1 MGP_CBAJ_G0029650.1 mouse_genomes_project 5 129848090 129859886 + Wsb2 protein_coding retained_intron MGP_CBAJ_T0073415.1 MGP_CBAJ_G0029650.1 mouse_genomes_project 5 129848181 129870655 + MGP_CBAJ_P0073415 Wsb2 protein_coding unknown_likely_coding MGP_CBAJ_T0073416.1 MGP_CBAJ_G0029650.1 mouse_genomes_project 5 129854079 129864026 + Wsb2 protein_coding processed_transcript MGP_CBAJ_T0073417.1 MGP_CBAJ_G0029650.1 mouse_genomes_project 5 129856579 129871159 + MGP_CBAJ_P0073417 Wsb2 protein_coding protein_coding MGP_CBAJ_T0073418.1 MGP_CBAJ_G0029650.1 mouse_genomes_project 5 129868754 129870583 + Wsb2 protein_coding retained_intron MGP_CBAJ_T0073419.1 MGP_CBAJ_G0029650.1 mouse_genomes_project 5 129869552 129870618 + Wsb2 protein_coding retained_intron MGP_CBAJ_T0098052.1 MGP_CBAJ_G0036325.1 mouse_genomes_project 5 23142444 23142537 - Gm24009 rRNA rRNA MGP_CBAJ_T0001849.1 MGP_CBAJ_G0001765.1 mouse_genomes_project 5 153182312 153183265 + TEC TEC MGP_CBAJ_T0070848.1 MGP_CBAJ_G0029142.1 mouse_genomes_project 5 36034634 36061274 + MGP_CBAJ_P0070848 Dok7 protein_coding protein_coding MGP_CBAJ_T0070849.1 MGP_CBAJ_G0029142.1 mouse_genomes_project 5 36034730 36061274 + MGP_CBAJ_P0070849 Dok7 protein_coding protein_coding MGP_CBAJ_T0070850.1 MGP_CBAJ_G0029142.1 mouse_genomes_project 5 36034756 36044300 + MGP_CBAJ_P0070850 Dok7 protein_coding protein_coding MGP_CBAJ_T0070851.1 MGP_CBAJ_G0029142.1 mouse_genomes_project 5 36034945 36068149 + MGP_CBAJ_P0070851 Dok7 protein_coding protein_coding MGP_CBAJ_T0070852.1 MGP_CBAJ_G0029142.1 mouse_genomes_project 5 36055267 36061274 + Dok7 protein_coding retained_intron MGP_CBAJ_T0074052.1 MGP_CBAJ_G0029760.1 mouse_genomes_project 5 138510253 138519453 + MGP_CBAJ_P0074052 Snrnp35 protein_coding protein_coding MGP_CBAJ_T0074053.1 MGP_CBAJ_G0029760.1 mouse_genomes_project 5 138510321 138518819 + MGP_CBAJ_P0074053 Snrnp35 protein_coding protein_coding MGP_CBAJ_T0074054.1 MGP_CBAJ_G0029760.1 mouse_genomes_project 5 138510577 138519436 + MGP_CBAJ_P0074054 Snrnp35 protein_coding protein_coding MGP_CBAJ_T0011489.1 MGP_CBAJ_G0009627.1 mouse_genomes_project 5 167510497 167510790 - Gm24105 misc_RNA misc_RNA MGP_CBAJ_T0014751.1 MGP_CBAJ_G0012863.1 mouse_genomes_project 5 53073422 53074164 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0075087.1 MGP_CBAJ_G0029955.1 mouse_genomes_project 5 156261880 156294040 - MGP_CBAJ_P0075087 Micall2 protein_coding protein_coding MGP_CBAJ_T0075088.1 MGP_CBAJ_G0029955.1 mouse_genomes_project 5 156262078 156265314 - Micall2 protein_coding retained_intron MGP_CBAJ_T0075089.1 MGP_CBAJ_G0029955.1 mouse_genomes_project 5 156265221 156266706 - MGP_CBAJ_P0075089 Micall2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075488.1 MGP_CBAJ_G0030050.1 mouse_genomes_project 5 164075332 164177368 + MGP_CBAJ_P0075488 Wasf3 protein_coding protein_coding MGP_CBAJ_T0070113.1 MGP_CBAJ_G0029022.1 mouse_genomes_project 5 24912658 24965911 + MGP_CBAJ_P0070113 Galntl5 protein_coding protein_coding MGP_CBAJ_T0070114.1 MGP_CBAJ_G0029022.1 mouse_genomes_project 5 24912700 24965909 + MGP_CBAJ_P0070114 Galntl5 protein_coding protein_coding MGP_CBAJ_T0072157.1 MGP_CBAJ_G0029392.1 mouse_genomes_project 5 98518227 98552325 + MGP_CBAJ_P0072157 Afm protein_coding protein_coding MGP_CBAJ_T0072158.1 MGP_CBAJ_G0029392.1 mouse_genomes_project 5 98518244 98547837 + MGP_CBAJ_P0072158 Afm protein_coding protein_coding MGP_CBAJ_T0073745.1 MGP_CBAJ_G0029717.1 mouse_genomes_project 5 136176710 136248808 - MGP_CBAJ_P0073745 Ift81 protein_coding protein_coding MGP_CBAJ_T0073746.1 MGP_CBAJ_G0029717.1 mouse_genomes_project 5 136176714 136193467 - Ift81 protein_coding retained_intron MGP_CBAJ_T0073747.1 MGP_CBAJ_G0029717.1 mouse_genomes_project 5 136201331 136206734 - Ift81 protein_coding processed_transcript MGP_CBAJ_T0073748.1 MGP_CBAJ_G0029717.1 mouse_genomes_project 5 136223788 136237645 - MGP_CBAJ_P0073748 Ift81 protein_coding protein_coding MGP_CBAJ_T0073749.1 MGP_CBAJ_G0029717.1 mouse_genomes_project 5 136236333 136248796 - Ift81 protein_coding retained_intron MGP_CBAJ_T0073750.1 MGP_CBAJ_G0029717.1 mouse_genomes_project 5 136236463 136248735 - MGP_CBAJ_P0073750 Ift81 protein_coding protein_coding MGP_CBAJ_T0073751.1 MGP_CBAJ_G0029717.1 mouse_genomes_project 5 136236498 136248791 - MGP_CBAJ_P0073751 Ift81 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073752.1 MGP_CBAJ_G0029717.1 mouse_genomes_project 5 136239215 136241660 - Ift81 protein_coding retained_intron MGP_CBAJ_T0073753.1 MGP_CBAJ_G0029717.1 mouse_genomes_project 5 136241323 136248806 - MGP_CBAJ_P0073753 Ift81 protein_coding nonsense_mediated_decay MGP_CBAJ_T0001763.1 MGP_CBAJ_G0001681.1 mouse_genomes_project 5 134735586 134737443 + TEC TEC MGP_CBAJ_T0072019.1 MGP_CBAJ_G0029355.1 mouse_genomes_project 5 95026686 95040910 - MGP_CBAJ_P0072019 Sult1d1 protein_coding protein_coding MGP_CBAJ_T0072020.1 MGP_CBAJ_G0029355.1 mouse_genomes_project 5 95028006 95032174 - Sult1d1 protein_coding processed_transcript MGP_CBAJ_T0001563.1 MGP_CBAJ_G0001483.1 mouse_genomes_project 5 58675540 58679141 + TEC TEC MGP_CBAJ_T0071950.1 MGP_CBAJ_G0029330.1 mouse_genomes_project 5 90156983 90258405 - MGP_CBAJ_P0071950 Tecrl protein_coding protein_coding MGP_CBAJ_T0071951.1 MGP_CBAJ_G0029330.1 mouse_genomes_project 5 90175153 90258166 - MGP_CBAJ_P0071951 Tecrl protein_coding protein_coding MGP_CBAJ_T0001516.1 MGP_CBAJ_G0001437.1 mouse_genomes_project 5 50441065 50442674 + TEC TEC MGP_CBAJ_T0074862.1 MGP_CBAJ_G0029906.1 mouse_genomes_project 5 153689238 153711604 + MGP_CBAJ_P0074862 Tsc22d4 protein_coding protein_coding MGP_CBAJ_T0074863.1 MGP_CBAJ_G0029906.1 mouse_genomes_project 5 153689467 153695975 + Tsc22d4 protein_coding retained_intron MGP_CBAJ_T0074864.1 MGP_CBAJ_G0029906.1 mouse_genomes_project 5 153689504 153704645 + MGP_CBAJ_P0074864 Tsc22d4 protein_coding protein_coding MGP_CBAJ_T0074865.1 MGP_CBAJ_G0029906.1 mouse_genomes_project 5 153694434 153702147 + Tsc22d4 protein_coding retained_intron MGP_CBAJ_T0074866.1 MGP_CBAJ_G0029906.1 mouse_genomes_project 5 153701393 153702797 + MGP_CBAJ_P0074866 Tsc22d4 protein_coding protein_coding MGP_CBAJ_T0074867.1 MGP_CBAJ_G0029906.1 mouse_genomes_project 5 153701433 153702681 + MGP_CBAJ_P0074867 Tsc22d4 protein_coding protein_coding MGP_CBAJ_T0074868.1 MGP_CBAJ_G0029906.1 mouse_genomes_project 5 153704935 153711546 + MGP_CBAJ_P0074868 Tsc22d4 protein_coding protein_coding MGP_CBAJ_T0074869.1 MGP_CBAJ_G0029906.1 mouse_genomes_project 5 153704946 153711546 + MGP_CBAJ_P0074869 Tsc22d4 protein_coding protein_coding MGP_CBAJ_T0074870.1 MGP_CBAJ_G0029906.1 mouse_genomes_project 5 153710843 153711436 + Tsc22d4 protein_coding processed_transcript MGP_CBAJ_T0099368.1 MGP_CBAJ_G0037623.1 mouse_genomes_project 5 93092589 93092750 + Gm24626 snRNA snRNA MGP_CBAJ_T0010599.1 MGP_CBAJ_G0008737.1 mouse_genomes_project 5 151322561 151322639 - Gm23268 miRNA miRNA MGP_CBAJ_T0073870.1 MGP_CBAJ_G0029732.1 mouse_genomes_project 5 137170556 137203477 + Bcl7a protein_coding processed_transcript MGP_CBAJ_T0073871.1 MGP_CBAJ_G0029732.1 mouse_genomes_project 5 137171170 137204409 + MGP_CBAJ_P0073871 Bcl7a protein_coding protein_coding MGP_CBAJ_T0073872.1 MGP_CBAJ_G0029732.1 mouse_genomes_project 5 137171222 137189750 + MGP_CBAJ_P0073872 Bcl7a protein_coding protein_coding MGP_CBAJ_T0073609.1 MGP_CBAJ_G0029696.1 mouse_genomes_project 5 134938398 134972891 - MGP_CBAJ_P0073609 Aldh2 protein_coding protein_coding MGP_CBAJ_T0073610.1 MGP_CBAJ_G0029696.1 mouse_genomes_project 5 134940249 134943548 - Aldh2 protein_coding retained_intron MGP_CBAJ_T0073611.1 MGP_CBAJ_G0029696.1 mouse_genomes_project 5 134940250 134952027 - MGP_CBAJ_P0073611 Aldh2 protein_coding protein_coding MGP_CBAJ_T0073612.1 MGP_CBAJ_G0029696.1 mouse_genomes_project 5 134940328 134945199 - MGP_CBAJ_P0073612 Aldh2 protein_coding protein_coding MGP_CBAJ_T0073613.1 MGP_CBAJ_G0029696.1 mouse_genomes_project 5 134942676 134972647 - MGP_CBAJ_P0073613 Aldh2 protein_coding protein_coding MGP_CBAJ_T0073614.1 MGP_CBAJ_G0029696.1 mouse_genomes_project 5 134943832 134947488 - Aldh2 protein_coding retained_intron MGP_CBAJ_T0073615.1 MGP_CBAJ_G0029696.1 mouse_genomes_project 5 134948817 134972649 - MGP_CBAJ_P0073615 Aldh2 protein_coding protein_coding MGP_CBAJ_T0070403.1 MGP_CBAJ_G0029080.1 mouse_genomes_project 5 31515613 31544202 - Gtf3c2 protein_coding retained_intron MGP_CBAJ_T0070404.1 MGP_CBAJ_G0029080.1 mouse_genomes_project 5 31515613 31544214 - MGP_CBAJ_P0070404 Gtf3c2 protein_coding protein_coding MGP_CBAJ_T0070405.1 MGP_CBAJ_G0029080.1 mouse_genomes_project 5 31516129 31544187 - MGP_CBAJ_P0070405 Gtf3c2 protein_coding protein_coding MGP_CBAJ_T0070406.1 MGP_CBAJ_G0029080.1 mouse_genomes_project 5 31517052 31518990 - Gtf3c2 protein_coding retained_intron MGP_CBAJ_T0070407.1 MGP_CBAJ_G0029080.1 mouse_genomes_project 5 31519104 31525742 - Gtf3c2 protein_coding retained_intron MGP_CBAJ_T0070408.1 MGP_CBAJ_G0029080.1 mouse_genomes_project 5 31528193 31543979 - Gtf3c2 protein_coding retained_intron MGP_CBAJ_T0070409.1 MGP_CBAJ_G0029080.1 mouse_genomes_project 5 31536763 31543981 - Gtf3c2 protein_coding retained_intron MGP_CBAJ_T0070410.1 MGP_CBAJ_G0029080.1 mouse_genomes_project 5 31537083 31538571 - MGP_CBAJ_P0070410 Gtf3c2 protein_coding protein_coding MGP_CBAJ_T0070411.1 MGP_CBAJ_G0029080.1 mouse_genomes_project 5 31537460 31543981 - MGP_CBAJ_P0070411 Gtf3c2 protein_coding protein_coding MGP_CBAJ_T0070412.1 MGP_CBAJ_G0029080.1 mouse_genomes_project 5 31537873 31543919 - MGP_CBAJ_P0070412 Gtf3c2 protein_coding protein_coding MGP_CBAJ_T0070413.1 MGP_CBAJ_G0029080.1 mouse_genomes_project 5 31537990 31538891 - MGP_CBAJ_P0070413 Gtf3c2 protein_coding protein_coding MGP_CBAJ_T0001596.1 MGP_CBAJ_G0001515.1 mouse_genomes_project 5 70015927 70016847 + TEC TEC MGP_CBAJ_T0001473.1 MGP_CBAJ_G0001394.1 mouse_genomes_project 5 36589553 36592258 - TEC TEC MGP_CBAJ_T0001497.1 MGP_CBAJ_G0001418.1 mouse_genomes_project 5 46414618 46417915 - TEC TEC MGP_CBAJ_T0073656.1 MGP_CBAJ_G0029702.1 mouse_genomes_project 5 135327962 135333611 + MGP_CBAJ_P0073656 Fam109a protein_coding protein_coding MGP_CBAJ_T0073657.1 MGP_CBAJ_G0029702.1 mouse_genomes_project 5 135327973 135333578 + MGP_CBAJ_P0073657 Fam109a protein_coding protein_coding MGP_CBAJ_T0073658.1 MGP_CBAJ_G0029702.1 mouse_genomes_project 5 135327983 135331863 + MGP_CBAJ_P0073658 Fam109a protein_coding protein_coding MGP_CBAJ_T0071432.1 MGP_CBAJ_G0029247.1 mouse_genomes_project 5 69928458 69955151 - MGP_CBAJ_P0071432 Ugdh protein_coding protein_coding MGP_CBAJ_T0071433.1 MGP_CBAJ_G0029247.1 mouse_genomes_project 5 69928461 69942956 - Ugdh protein_coding retained_intron MGP_CBAJ_T0071434.1 MGP_CBAJ_G0029247.1 mouse_genomes_project 5 69935017 69940312 - Ugdh protein_coding retained_intron MGP_CBAJ_T0071435.1 MGP_CBAJ_G0029247.1 mouse_genomes_project 5 69940849 69945664 - MGP_CBAJ_P0071435 Ugdh protein_coding protein_coding MGP_CBAJ_T0070148.1 MGP_CBAJ_G0029032.1 mouse_genomes_project 5 27693760 27748334 - MGP_CBAJ_P0070148 Paxip1 protein_coding protein_coding MGP_CBAJ_T0070149.1 MGP_CBAJ_G0029032.1 mouse_genomes_project 5 27697755 27708432 - Paxip1 protein_coding retained_intron MGP_CBAJ_T0070150.1 MGP_CBAJ_G0029032.1 mouse_genomes_project 5 27716513 27722515 - Paxip1 protein_coding retained_intron MGP_CBAJ_T0070151.1 MGP_CBAJ_G0029032.1 mouse_genomes_project 5 27729255 27748179 - MGP_CBAJ_P0070151 Paxip1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070152.1 MGP_CBAJ_G0029032.1 mouse_genomes_project 5 27738221 27748475 - Paxip1 protein_coding processed_transcript MGP_CBAJ_T0070153.1 MGP_CBAJ_G0029032.1 mouse_genomes_project 5 27740352 27748167 - Paxip1 protein_coding retained_intron MGP_CBAJ_T0070154.1 MGP_CBAJ_G0029032.1 mouse_genomes_project 5 27743318 27747148 - Paxip1 protein_coding retained_intron MGP_CBAJ_T0014845.1 MGP_CBAJ_G0012957.1 mouse_genomes_project 5 98086683 98087130 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014975.1 MGP_CBAJ_G0013087.1 mouse_genomes_project 5 162783817 162784403 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014842.1 MGP_CBAJ_G0012954.1 mouse_genomes_project 5 96585890 96587520 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100615.1 MGP_CBAJ_G0038870.1 mouse_genomes_project 5 70365612 70365806 + Gm24346 snoRNA snoRNA MGP_CBAJ_T0014760.1 MGP_CBAJ_G0012872.1 mouse_genomes_project 5 58775888 58776195 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001476.1 MGP_CBAJ_G0001397.1 mouse_genomes_project 5 38073686 38073819 + TEC TEC MGP_CBAJ_T0014674.1 MGP_CBAJ_G0012786.1 mouse_genomes_project 5 21854000 21854296 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098407.1 MGP_CBAJ_G0036673.1 mouse_genomes_project 5 46649817 46655652 - Gm3364 sense_intronic sense_intronic MGP_CBAJ_T0069617.1 MGP_CBAJ_G0028931.1 mouse_genomes_project 5 1922026 1926223 - MGP_CBAJ_P0069617 Fzd1 protein_coding protein_coding MGP_CBAJ_T0008206.1 MGP_CBAJ_G0006665.1 mouse_genomes_project 5 127426994 127446808 + Gm13830 lincRNA lincRNA MGP_CBAJ_T0008207.1 MGP_CBAJ_G0006665.1 mouse_genomes_project 5 127427010 127428171 + Gm13830 lincRNA lincRNA MGP_CBAJ_T0008208.1 MGP_CBAJ_G0006665.1 mouse_genomes_project 5 127427011 127445190 + Gm13830 lincRNA lincRNA MGP_CBAJ_T0008209.1 MGP_CBAJ_G0006665.1 mouse_genomes_project 5 127427021 127428204 + Gm13830 lincRNA lincRNA MGP_CBAJ_T0008210.1 MGP_CBAJ_G0006665.1 mouse_genomes_project 5 127427081 127427613 + Gm13830 lincRNA lincRNA MGP_CBAJ_T0075363.1 MGP_CBAJ_G0030017.1 mouse_genomes_project 5 161780461 161798126 + MGP_CBAJ_P0075363 Nptx2 protein_coding protein_coding MGP_CBAJ_T0008048.1 MGP_CBAJ_G0006553.1 mouse_genomes_project 5 68980909 68997763 - Gm3716 lincRNA lincRNA MGP_CBAJ_T0008049.1 MGP_CBAJ_G0006553.1 mouse_genomes_project 5 68982280 68990205 - Gm3716 lincRNA lincRNA MGP_CBAJ_T0070121.1 MGP_CBAJ_G0029025.1 mouse_genomes_project 5 25007544 25200074 - MGP_CBAJ_P0070121 Kmt2c protein_coding unknown_likely_coding MGP_CBAJ_T0070122.1 MGP_CBAJ_G0029025.1 mouse_genomes_project 5 25007553 25037771 - MGP_CBAJ_P0070122 Kmt2c protein_coding protein_coding MGP_CBAJ_T0070123.1 MGP_CBAJ_G0029025.1 mouse_genomes_project 5 25008181 25049007 - MGP_CBAJ_P0070123 Kmt2c protein_coding protein_coding MGP_CBAJ_T0070124.1 MGP_CBAJ_G0029025.1 mouse_genomes_project 5 25009364 25260224 - MGP_CBAJ_P0070124 Kmt2c protein_coding protein_coding MGP_CBAJ_T0070125.1 MGP_CBAJ_G0029025.1 mouse_genomes_project 5 25011408 25019121 - Kmt2c protein_coding retained_intron MGP_CBAJ_T0070126.1 MGP_CBAJ_G0029025.1 mouse_genomes_project 5 25026760 25031075 - Kmt2c protein_coding retained_intron MGP_CBAJ_T0070127.1 MGP_CBAJ_G0029025.1 mouse_genomes_project 5 25056192 25260181 - MGP_CBAJ_P0070127 Kmt2c protein_coding protein_coding MGP_CBAJ_T0070128.1 MGP_CBAJ_G0029025.1 mouse_genomes_project 5 25113132 25260234 - MGP_CBAJ_P0070128 Kmt2c protein_coding protein_coding MGP_CBAJ_T0070129.1 MGP_CBAJ_G0029025.1 mouse_genomes_project 5 25124717 25260262 - Kmt2c protein_coding retained_intron MGP_CBAJ_T0014796.1 MGP_CBAJ_G0012908.1 mouse_genomes_project 5 73135161 73135486 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098431.1 MGP_CBAJ_G0036693.1 mouse_genomes_project 5 167729243 167730964 + 4933425D22Rik sense_intronic sense_intronic MGP_CBAJ_T0071892.1 MGP_CBAJ_G0029321.1 mouse_genomes_project 5 82954547 82959951 + MGP_CBAJ_P0071892 Arl9 protein_coding protein_coding MGP_CBAJ_T0071893.1 MGP_CBAJ_G0029321.1 mouse_genomes_project 5 82956963 82961080 + MGP_CBAJ_P0071893 Arl9 protein_coding protein_coding MGP_CBAJ_T0075470.1 MGP_CBAJ_G0030046.1 mouse_genomes_project 5 163785511 163787646 - MGP_CBAJ_P0075470 Gm6370 protein_coding protein_coding MGP_CBAJ_T0010549.1 MGP_CBAJ_G0008687.1 mouse_genomes_project 5 35490815 35490878 + Mir7036b miRNA miRNA MGP_CBAJ_T0072678.1 MGP_CBAJ_G0029509.1 mouse_genomes_project 5 117959701 118032994 + MGP_CBAJ_P0072678 Rpap2 protein_coding protein_coding MGP_CBAJ_T0072679.1 MGP_CBAJ_G0029509.1 mouse_genomes_project 5 117959722 118014276 + MGP_CBAJ_P0072679 Rpap2 protein_coding protein_coding MGP_CBAJ_T0072680.1 MGP_CBAJ_G0029509.1 mouse_genomes_project 5 117959726 117967201 + Rpap2 protein_coding processed_transcript MGP_CBAJ_T0072681.1 MGP_CBAJ_G0029509.1 mouse_genomes_project 5 117959779 118014276 + MGP_CBAJ_P0072681 Rpap2 protein_coding protein_coding MGP_CBAJ_T0072682.1 MGP_CBAJ_G0029509.1 mouse_genomes_project 5 117959793 118032998 + MGP_CBAJ_P0072682 Rpap2 protein_coding protein_coding MGP_CBAJ_T0072683.1 MGP_CBAJ_G0029509.1 mouse_genomes_project 5 117959966 117967029 + MGP_CBAJ_P0072683 Rpap2 protein_coding protein_coding MGP_CBAJ_T0072684.1 MGP_CBAJ_G0029509.1 mouse_genomes_project 5 117959987 117974853 + MGP_CBAJ_P0072684 Rpap2 protein_coding protein_coding MGP_CBAJ_T0073322.1 MGP_CBAJ_G0029636.1 mouse_genomes_project 5 127743191 127749113 + MGP_CBAJ_P0073322 Rplp0 protein_coding protein_coding MGP_CBAJ_T0073323.1 MGP_CBAJ_G0029636.1 mouse_genomes_project 5 127743261 127747941 + MGP_CBAJ_P0073323 Rplp0 protein_coding protein_coding MGP_CBAJ_T0073324.1 MGP_CBAJ_G0029636.1 mouse_genomes_project 5 127743302 127744937 + MGP_CBAJ_P0073324 Rplp0 protein_coding protein_coding MGP_CBAJ_T0073325.1 MGP_CBAJ_G0029636.1 mouse_genomes_project 5 127743347 127744794 + Rplp0 protein_coding retained_intron MGP_CBAJ_T0074340.1 MGP_CBAJ_G0029815.1 mouse_genomes_project 5 149275221 149326561 + Gatsl2 protein_coding processed_transcript MGP_CBAJ_T0074341.1 MGP_CBAJ_G0029815.1 mouse_genomes_project 5 149275255 149320491 + MGP_CBAJ_P0074341 Gatsl2 protein_coding protein_coding MGP_CBAJ_T0074342.1 MGP_CBAJ_G0029815.1 mouse_genomes_project 5 149317154 149319743 + Gatsl2 protein_coding retained_intron MGP_CBAJ_T0001660.1 MGP_CBAJ_G0001578.1 mouse_genomes_project 5 80263971 80265301 + TEC TEC MGP_CBAJ_T0072656.1 MGP_CBAJ_G0029503.1 mouse_genomes_project 5 117784454 117787946 + MGP_CBAJ_P0072656 Lpcat2b protein_coding protein_coding MGP_CBAJ_T0008321.1 MGP_CBAJ_G0006741.1 mouse_genomes_project 5 157234892 157235799 - Gm42808 lincRNA lincRNA MGP_CBAJ_T0074075.1 MGP_CBAJ_G0029765.1 mouse_genomes_project 5 138614023 138633859 + MGP_CBAJ_P0074075 Gtf2h3 protein_coding protein_coding MGP_CBAJ_T0074076.1 MGP_CBAJ_G0029765.1 mouse_genomes_project 5 138614025 138616556 + Gtf2h3 protein_coding retained_intron MGP_CBAJ_T0074077.1 MGP_CBAJ_G0029765.1 mouse_genomes_project 5 138614049 138628806 + Gtf2h3 protein_coding retained_intron MGP_CBAJ_T0074078.1 MGP_CBAJ_G0029765.1 mouse_genomes_project 5 138618729 138631775 + Gtf2h3 protein_coding retained_intron MGP_CBAJ_T0074079.1 MGP_CBAJ_G0029765.1 mouse_genomes_project 5 138626557 138632766 + Gtf2h3 protein_coding retained_intron MGP_CBAJ_T0074080.1 MGP_CBAJ_G0029765.1 mouse_genomes_project 5 138630443 138631784 + Gtf2h3 protein_coding retained_intron MGP_CBAJ_T0001619.1 MGP_CBAJ_G0001538.1 mouse_genomes_project 5 71292068 71297441 - TEC TEC MGP_CBAJ_T0014995.1 MGP_CBAJ_G0013107.1 mouse_genomes_project 5 168004231 168004690 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004803.1 MGP_CBAJ_G0004125.1 mouse_genomes_project 5 161413305 161418015 - 2900089D17Rik antisense antisense MGP_CBAJ_T0004804.1 MGP_CBAJ_G0004125.1 mouse_genomes_project 5 161413392 161428498 - 2900089D17Rik antisense antisense MGP_CBAJ_T0073474.1 MGP_CBAJ_G0029663.1 mouse_genomes_project 5 133062687 133145162 + MGP_CBAJ_P0073474 Rbm19 protein_coding protein_coding MGP_CBAJ_T0073475.1 MGP_CBAJ_G0029663.1 mouse_genomes_project 5 133062739 133065204 + Rbm19 protein_coding retained_intron MGP_CBAJ_T0073476.1 MGP_CBAJ_G0029663.1 mouse_genomes_project 5 133062742 133145160 + MGP_CBAJ_P0073476 Rbm19 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073477.1 MGP_CBAJ_G0029663.1 mouse_genomes_project 5 133064818 133066516 + Rbm19 protein_coding retained_intron MGP_CBAJ_T0073478.1 MGP_CBAJ_G0029663.1 mouse_genomes_project 5 133103068 133145152 + Rbm19 protein_coding processed_transcript MGP_CBAJ_T0073479.1 MGP_CBAJ_G0029663.1 mouse_genomes_project 5 133108952 133144374 + Rbm19 protein_coding processed_transcript MGP_CBAJ_T0073480.1 MGP_CBAJ_G0029663.1 mouse_genomes_project 5 133114597 133132441 + Rbm19 protein_coding processed_transcript MGP_CBAJ_T0073481.1 MGP_CBAJ_G0029663.1 mouse_genomes_project 5 133116191 133145158 + Rbm19 protein_coding processed_transcript MGP_CBAJ_T0073482.1 MGP_CBAJ_G0029663.1 mouse_genomes_project 5 133119384 133144171 + Rbm19 protein_coding processed_transcript MGP_CBAJ_T0073483.1 MGP_CBAJ_G0029663.1 mouse_genomes_project 5 133122009 133144150 + Rbm19 protein_coding processed_transcript MGP_CBAJ_T0008102.1 MGP_CBAJ_G0006597.1 mouse_genomes_project 5 105827711 105839565 + Gm42601 lincRNA lincRNA MGP_CBAJ_T0071329.1 MGP_CBAJ_G0029226.1 mouse_genomes_project 5 57007517 57145055 + MGP_CBAJ_P0071329 Stim2 protein_coding protein_coding MGP_CBAJ_T0071330.1 MGP_CBAJ_G0029226.1 mouse_genomes_project 5 57008274 57145064 + MGP_CBAJ_P0071330 Stim2 protein_coding protein_coding MGP_CBAJ_T0071331.1 MGP_CBAJ_G0029226.1 mouse_genomes_project 5 57098856 57128416 + Stim2 protein_coding processed_transcript MGP_CBAJ_T0071332.1 MGP_CBAJ_G0029226.1 mouse_genomes_project 5 57139856 57142585 + Stim2 protein_coding retained_intron MGP_CBAJ_T0071909.1 MGP_CBAJ_G0029327.1 mouse_genomes_project 5 83342749 83385498 + MGP_CBAJ_P0071909 Polr2b protein_coding protein_coding MGP_CBAJ_T0071910.1 MGP_CBAJ_G0029327.1 mouse_genomes_project 5 83343093 83345880 + Polr2b protein_coding retained_intron MGP_CBAJ_T0071911.1 MGP_CBAJ_G0029327.1 mouse_genomes_project 5 83362080 83363296 + Polr2b protein_coding retained_intron MGP_CBAJ_T0071912.1 MGP_CBAJ_G0029327.1 mouse_genomes_project 5 83376555 83379110 + Polr2b protein_coding retained_intron MGP_CBAJ_T0072416.1 MGP_CBAJ_G0029454.1 mouse_genomes_project 5 109759934 109777190 - Sec31a protein_coding retained_intron MGP_CBAJ_T0072417.1 MGP_CBAJ_G0029454.1 mouse_genomes_project 5 109759934 109814492 - MGP_CBAJ_P0072417 Sec31a protein_coding protein_coding MGP_CBAJ_T0072418.1 MGP_CBAJ_G0029454.1 mouse_genomes_project 5 109759935 109771761 - MGP_CBAJ_P0072418 Sec31a protein_coding protein_coding MGP_CBAJ_T0072419.1 MGP_CBAJ_G0029454.1 mouse_genomes_project 5 109759939 109814433 - MGP_CBAJ_P0072419 Sec31a protein_coding protein_coding MGP_CBAJ_T0072420.1 MGP_CBAJ_G0029454.1 mouse_genomes_project 5 109760293 109794174 - MGP_CBAJ_P0072420 Sec31a protein_coding protein_coding MGP_CBAJ_T0072421.1 MGP_CBAJ_G0029454.1 mouse_genomes_project 5 109760431 109762556 - Sec31a protein_coding retained_intron MGP_CBAJ_T0072422.1 MGP_CBAJ_G0029454.1 mouse_genomes_project 5 109760496 109781124 - MGP_CBAJ_P0072422 Sec31a protein_coding protein_coding MGP_CBAJ_T0072423.1 MGP_CBAJ_G0029454.1 mouse_genomes_project 5 109764039 109777276 - MGP_CBAJ_P0072423 Sec31a protein_coding protein_coding MGP_CBAJ_T0072424.1 MGP_CBAJ_G0029454.1 mouse_genomes_project 5 109781155 109790887 - MGP_CBAJ_P0072424 Sec31a protein_coding protein_coding MGP_CBAJ_T0072425.1 MGP_CBAJ_G0029454.1 mouse_genomes_project 5 109799705 109803834 - Sec31a protein_coding processed_transcript MGP_CBAJ_T0072426.1 MGP_CBAJ_G0029454.1 mouse_genomes_project 5 109805944 109807875 - Sec31a protein_coding retained_intron MGP_CBAJ_T0072427.1 MGP_CBAJ_G0029454.1 mouse_genomes_project 5 109813666 109814424 - Sec31a protein_coding retained_intron MGP_CBAJ_T0071777.1 MGP_CBAJ_G0029303.1 mouse_genomes_project 5 80280445 80379024 - MGP_CBAJ_P0071777 Lnx1 protein_coding protein_coding MGP_CBAJ_T0071778.1 MGP_CBAJ_G0029303.1 mouse_genomes_project 5 80280445 80387788 - MGP_CBAJ_P0071778 Lnx1 protein_coding protein_coding MGP_CBAJ_T0071779.1 MGP_CBAJ_G0029303.1 mouse_genomes_project 5 80280445 80379025 - MGP_CBAJ_P0071779 Lnx1 protein_coding protein_coding MGP_CBAJ_T0071780.1 MGP_CBAJ_G0029303.1 mouse_genomes_project 5 80280677 80379010 - MGP_CBAJ_P0071780 Lnx1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071782.1 MGP_CBAJ_G0029303.1 mouse_genomes_project 5 80285102 80378781 - MGP_CBAJ_P0071782 Lnx1 protein_coding protein_coding MGP_CBAJ_T0071783.1 MGP_CBAJ_G0029303.1 mouse_genomes_project 5 80285102 80404904 - MGP_CBAJ_P0071783 Lnx1 protein_coding protein_coding MGP_CBAJ_T0071784.1 MGP_CBAJ_G0029303.1 mouse_genomes_project 5 80285102 80378952 - MGP_CBAJ_P0071784 Lnx1 protein_coding protein_coding MGP_CBAJ_T0071785.1 MGP_CBAJ_G0029303.1 mouse_genomes_project 5 80285102 80379025 - MGP_CBAJ_P0071785 Lnx1 protein_coding protein_coding MGP_CBAJ_T0071786.1 MGP_CBAJ_G0029303.1 mouse_genomes_project 5 80285774 80313652 - MGP_CBAJ_P0071786 Lnx1 protein_coding protein_coding MGP_CBAJ_T0071787.1 MGP_CBAJ_G0029303.1 mouse_genomes_project 5 80296844 80378751 - MGP_CBAJ_P0071787 Lnx1 protein_coding unknown_likely_coding MGP_CBAJ_T0014926.1 MGP_CBAJ_G0013038.1 mouse_genomes_project 5 135902928 135903546 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098418.1 MGP_CBAJ_G0036684.1 mouse_genomes_project 5 143274269 143275293 - Gm42871 sense_intronic sense_intronic MGP_CBAJ_T0008283.1 MGP_CBAJ_G0006714.1 mouse_genomes_project 5 141413188 141413976 + Gm43475 lincRNA lincRNA MGP_CBAJ_T0073093.1 MGP_CBAJ_G0029591.1 mouse_genomes_project 5 125805913 125834449 + MGP_CBAJ_P0073093 Dao protein_coding protein_coding MGP_CBAJ_T0073094.1 MGP_CBAJ_G0029591.1 mouse_genomes_project 5 125806094 125834216 + MGP_CBAJ_P0073094 Dao protein_coding protein_coding MGP_CBAJ_T0073095.1 MGP_CBAJ_G0029591.1 mouse_genomes_project 5 125807019 125834216 + MGP_CBAJ_P0073095 Dao protein_coding protein_coding MGP_CBAJ_T0073096.1 MGP_CBAJ_G0029591.1 mouse_genomes_project 5 125815252 125824172 + MGP_CBAJ_P0073096 Dao protein_coding protein_coding MGP_CBAJ_T0073097.1 MGP_CBAJ_G0029591.1 mouse_genomes_project 5 125825766 125828816 + Dao protein_coding retained_intron MGP_CBAJ_T0071565.1 MGP_CBAJ_G0029263.1 mouse_genomes_project 5 72095524 72146748 + MGP_CBAJ_P0071565 Slc30a9 protein_coding protein_coding MGP_CBAJ_T0071566.1 MGP_CBAJ_G0029263.1 mouse_genomes_project 5 72095524 72146745 + MGP_CBAJ_P0071566 Slc30a9 protein_coding protein_coding MGP_CBAJ_T0071567.1 MGP_CBAJ_G0029263.1 mouse_genomes_project 5 72095533 72098328 + Slc30a9 protein_coding retained_intron MGP_CBAJ_T0071568.1 MGP_CBAJ_G0029263.1 mouse_genomes_project 5 72095534 72144091 + MGP_CBAJ_P0071568 Slc30a9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071569.1 MGP_CBAJ_G0029263.1 mouse_genomes_project 5 72095753 72107463 + Slc30a9 protein_coding processed_transcript MGP_CBAJ_T0071570.1 MGP_CBAJ_G0029263.1 mouse_genomes_project 5 72104272 72130532 + MGP_CBAJ_P0071570 Slc30a9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071571.1 MGP_CBAJ_G0029263.1 mouse_genomes_project 5 72104298 72117309 + MGP_CBAJ_P0071571 Slc30a9 protein_coding protein_coding MGP_CBAJ_T0071572.1 MGP_CBAJ_G0029263.1 mouse_genomes_project 5 72120910 72141661 + Slc30a9 protein_coding retained_intron MGP_CBAJ_T0001431.1 MGP_CBAJ_G0001355.1 mouse_genomes_project 5 20161737 20163070 + TEC TEC MGP_CBAJ_T0008117.1 MGP_CBAJ_G0006609.1 mouse_genomes_project 5 109004758 109027860 - Gm43248 lincRNA lincRNA MGP_CBAJ_T0008118.1 MGP_CBAJ_G0006609.1 mouse_genomes_project 5 109016318 109027398 - Gm43248 lincRNA lincRNA MGP_CBAJ_T0070451.1 MGP_CBAJ_G0029085.1 mouse_genomes_project 5 31618151 31618709 - MGP_CBAJ_P0070451 Gm9970 protein_coding protein_coding MGP_CBAJ_T0074760.1 MGP_CBAJ_G0029887.1 mouse_genomes_project 5 153144089 153148830 - MGP_CBAJ_P0074760 Trip6 protein_coding protein_coding MGP_CBAJ_T0074761.1 MGP_CBAJ_G0029887.1 mouse_genomes_project 5 153147378 153148617 - MGP_CBAJ_P0074761 Trip6 protein_coding protein_coding MGP_CBAJ_T0074762.1 MGP_CBAJ_G0029887.1 mouse_genomes_project 5 153147405 153148588 - Trip6 protein_coding retained_intron MGP_CBAJ_T0074763.1 MGP_CBAJ_G0029887.1 mouse_genomes_project 5 153147784 153148634 - Trip6 protein_coding processed_transcript MGP_CBAJ_T0073016.1 MGP_CBAJ_G0029577.1 mouse_genomes_project 5 124750790 124756055 - MGP_CBAJ_P0073016 Crybb3 protein_coding protein_coding MGP_CBAJ_T0073017.1 MGP_CBAJ_G0029577.1 mouse_genomes_project 5 124750790 124755612 - MGP_CBAJ_P0073017 Crybb3 protein_coding protein_coding MGP_CBAJ_T0073018.1 MGP_CBAJ_G0029577.1 mouse_genomes_project 5 124750790 124756529 - MGP_CBAJ_P0073018 Crybb3 protein_coding protein_coding MGP_CBAJ_T0073019.1 MGP_CBAJ_G0029577.1 mouse_genomes_project 5 124750794 124756055 - MGP_CBAJ_P0073019 Crybb3 protein_coding protein_coding MGP_CBAJ_T0073020.1 MGP_CBAJ_G0029577.1 mouse_genomes_project 5 124750798 124756528 - MGP_CBAJ_P0073020 Crybb3 protein_coding protein_coding MGP_CBAJ_T0073021.1 MGP_CBAJ_G0029577.1 mouse_genomes_project 5 124751972 124755336 - Crybb3 protein_coding retained_intron MGP_CBAJ_T0073022.1 MGP_CBAJ_G0029577.1 mouse_genomes_project 5 124752237 124755611 - Crybb3 protein_coding retained_intron MGP_CBAJ_T0073023.1 MGP_CBAJ_G0029577.1 mouse_genomes_project 5 124753335 124755598 - MGP_CBAJ_P0073023 Crybb3 protein_coding protein_coding MGP_CBAJ_T0073024.1 MGP_CBAJ_G0029577.1 mouse_genomes_project 5 124753418 124756524 - MGP_CBAJ_P0073024 Crybb3 protein_coding protein_coding MGP_CBAJ_T0073025.1 MGP_CBAJ_G0029577.1 mouse_genomes_project 5 124753484 124756525 - Crybb3 protein_coding processed_transcript MGP_CBAJ_T0073026.1 MGP_CBAJ_G0029577.1 mouse_genomes_project 5 124754701 124756004 - MGP_CBAJ_P0073026 Crybb3 protein_coding protein_coding MGP_CBAJ_T0004670.1 MGP_CBAJ_G0004033.1 mouse_genomes_project 5 111441617 111450401 + Gm20548 antisense antisense MGP_CBAJ_T0004671.1 MGP_CBAJ_G0004033.1 mouse_genomes_project 5 111441643 111448479 + Gm20548 antisense antisense MGP_CBAJ_T0004672.1 MGP_CBAJ_G0004033.1 mouse_genomes_project 5 111441653 111448442 + Gm20548 antisense antisense MGP_CBAJ_T0004673.1 MGP_CBAJ_G0004033.1 mouse_genomes_project 5 111441659 111450612 + Gm20548 antisense antisense MGP_CBAJ_T0004674.1 MGP_CBAJ_G0004033.1 mouse_genomes_project 5 111444356 111448534 + Gm20548 antisense antisense MGP_CBAJ_T0100633.1 MGP_CBAJ_G0038888.1 mouse_genomes_project 5 118314726 118314858 + Gm22270 snoRNA snoRNA MGP_CBAJ_T0011705.1 MGP_CBAJ_G0009821.1 mouse_genomes_project 5 133927842 133929794 + Oas1b polymorphic_pseudogene processed_transcript MGP_CBAJ_T0011706.1 MGP_CBAJ_G0009821.1 mouse_genomes_project 5 133927845 133949805 + MGP_CBAJ_P0011706 Oas1b polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0073541.1 MGP_CBAJ_G0009821.1 mouse_genomes_project 5 133928064 133946952 + MGP_CBAJ_P0073541 Oas1b polymorphic_pseudogene unknown_likely_coding MGP_CBAJ_T0001557.1 MGP_CBAJ_G0001477.1 mouse_genomes_project 5 54902613 54903999 - TEC TEC MGP_CBAJ_T0101962.1 MGP_CBAJ_G0039993.1 mouse_genomes_project 5 167094741 167094964 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0014721.1 MGP_CBAJ_G0012833.1 mouse_genomes_project 5 34580184 34580496 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0071293.1 MGP_CBAJ_G0029220.1 mouse_genomes_project 5 55870856 55894175 + MGP_CBAJ_P0071293 Slc34a2 protein_coding protein_coding MGP_CBAJ_T0071294.1 MGP_CBAJ_G0029220.1 mouse_genomes_project 5 55882118 55906383 + MGP_CBAJ_P0071294 Slc34a2 protein_coding protein_coding MGP_CBAJ_T0071295.1 MGP_CBAJ_G0029220.1 mouse_genomes_project 5 55882119 55899048 + Slc34a2 protein_coding retained_intron MGP_CBAJ_T0014947.1 MGP_CBAJ_G0013059.1 mouse_genomes_project 5 153298517 153298794 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014899.1 MGP_CBAJ_G0013011.1 mouse_genomes_project 5 120490261 120490838 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0072191.1 MGP_CBAJ_G0029406.1 mouse_genomes_project 5 99421936 99477510 - MGP_CBAJ_P0072191 Btc protein_coding protein_coding MGP_CBAJ_T0072192.1 MGP_CBAJ_G0029406.1 mouse_genomes_project 5 99422064 99477338 - Btc protein_coding retained_intron MGP_CBAJ_T0072193.1 MGP_CBAJ_G0029406.1 mouse_genomes_project 5 99423594 99477376 - MGP_CBAJ_P0072193 Btc protein_coding nonsense_mediated_decay MGP_CBAJ_T0072194.1 MGP_CBAJ_G0029406.1 mouse_genomes_project 5 99430466 99441698 - Btc protein_coding processed_transcript MGP_CBAJ_T0073256.1 MGP_CBAJ_G0029624.1 mouse_genomes_project 5 127350530 127355679 + MGP_CBAJ_P0073256 Pop5 protein_coding protein_coding MGP_CBAJ_T0073257.1 MGP_CBAJ_G0029624.1 mouse_genomes_project 5 127352666 127354930 + Pop5 protein_coding processed_transcript MGP_CBAJ_T0073258.1 MGP_CBAJ_G0029624.1 mouse_genomes_project 5 127352719 127360066 + MGP_CBAJ_P0073258 Pop5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073259.1 MGP_CBAJ_G0029624.1 mouse_genomes_project 5 127352722 127355632 + Pop5 protein_coding processed_transcript MGP_CBAJ_T0073260.1 MGP_CBAJ_G0029624.1 mouse_genomes_project 5 127352734 127355355 + Pop5 protein_coding retained_intron MGP_CBAJ_T0073261.1 MGP_CBAJ_G0029624.1 mouse_genomes_project 5 127355028 127355654 + Pop5 protein_coding processed_transcript MGP_CBAJ_T0001615.1 MGP_CBAJ_G0001534.1 mouse_genomes_project 5 71120762 71122972 - TEC TEC MGP_CBAJ_T0014725.1 MGP_CBAJ_G0012837.1 mouse_genomes_project 5 35378305 35378988 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0070233.1 MGP_CBAJ_G0029051.1 mouse_genomes_project 5 30406424 30441202 + MGP_CBAJ_P0070233 Hadhb protein_coding protein_coding MGP_CBAJ_T0070234.1 MGP_CBAJ_G0029051.1 mouse_genomes_project 5 30406434 30426154 + MGP_CBAJ_P0070234 Hadhb protein_coding protein_coding MGP_CBAJ_T0070235.1 MGP_CBAJ_G0029051.1 mouse_genomes_project 5 30406435 30440697 + MGP_CBAJ_P0070235 Hadhb protein_coding unknown_likely_coding MGP_CBAJ_T0070236.1 MGP_CBAJ_G0029051.1 mouse_genomes_project 5 30406448 30441195 + MGP_CBAJ_P0070236 Hadhb protein_coding protein_coding MGP_CBAJ_T0070237.1 MGP_CBAJ_G0029051.1 mouse_genomes_project 5 30406448 30441191 + MGP_CBAJ_P0070237 Hadhb protein_coding protein_coding MGP_CBAJ_T0070238.1 MGP_CBAJ_G0029051.1 mouse_genomes_project 5 30406451 30419474 + Hadhb protein_coding retained_intron MGP_CBAJ_T0070239.1 MGP_CBAJ_G0029051.1 mouse_genomes_project 5 30406479 30428092 + MGP_CBAJ_P0070239 Hadhb protein_coding nonsense_mediated_decay MGP_CBAJ_T0070240.1 MGP_CBAJ_G0029051.1 mouse_genomes_project 5 30426158 30432136 + Hadhb protein_coding retained_intron MGP_CBAJ_T0070241.1 MGP_CBAJ_G0029051.1 mouse_genomes_project 5 30431602 30434017 + Hadhb protein_coding retained_intron MGP_CBAJ_T0070242.1 MGP_CBAJ_G0029051.1 mouse_genomes_project 5 30433273 30440845 + Hadhb protein_coding retained_intron MGP_CBAJ_T0071017.1 MGP_CBAJ_G0029174.1 mouse_genomes_project 5 39453523 39469962 - Zbtb49 protein_coding processed_transcript MGP_CBAJ_T0071018.1 MGP_CBAJ_G0029174.1 mouse_genomes_project 5 39463864 39484231 - MGP_CBAJ_P0071018 Zbtb49 protein_coding protein_coding MGP_CBAJ_T0071019.1 MGP_CBAJ_G0029174.1 mouse_genomes_project 5 39464029 39484187 - MGP_CBAJ_P0071019 Zbtb49 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071020.1 MGP_CBAJ_G0029174.1 mouse_genomes_project 5 39464032 39484199 - MGP_CBAJ_P0071020 Zbtb49 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071021.1 MGP_CBAJ_G0029174.1 mouse_genomes_project 5 39464417 39484199 - MGP_CBAJ_P0071021 Zbtb49 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071022.1 MGP_CBAJ_G0029174.1 mouse_genomes_project 5 39464417 39484201 - MGP_CBAJ_P0071022 Zbtb49 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071023.1 MGP_CBAJ_G0029174.1 mouse_genomes_project 5 39467030 39467580 - MGP_CBAJ_P0071023 Zbtb49 protein_coding protein_coding MGP_CBAJ_T0071024.1 MGP_CBAJ_G0029174.1 mouse_genomes_project 5 39467531 39477326 - MGP_CBAJ_P0071024 Zbtb49 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071025.1 MGP_CBAJ_G0029174.1 mouse_genomes_project 5 39467587 39484205 - MGP_CBAJ_P0071025 Zbtb49 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071026.1 MGP_CBAJ_G0029174.1 mouse_genomes_project 5 39475811 39484228 - MGP_CBAJ_P0071026 Zbtb49 protein_coding protein_coding MGP_CBAJ_T0071027.1 MGP_CBAJ_G0029174.1 mouse_genomes_project 5 39479152 39484198 - Zbtb49 protein_coding retained_intron MGP_CBAJ_T0004772.1 MGP_CBAJ_G0004104.1 mouse_genomes_project 5 150346554 150360432 - Wbscr25 antisense antisense MGP_CBAJ_T0004773.1 MGP_CBAJ_G0004104.1 mouse_genomes_project 5 150351620 150359589 - Wbscr25 antisense antisense MGP_CBAJ_T0004781.1 MGP_CBAJ_G0004111.1 mouse_genomes_project 5 153425954 153435148 + Gm17112 antisense antisense MGP_CBAJ_T0072794.1 MGP_CBAJ_G0029529.1 mouse_genomes_project 5 119217604 119223265 - MGP_CBAJ_P0072794 Slc26a1 protein_coding protein_coding MGP_CBAJ_T0072795.1 MGP_CBAJ_G0029529.1 mouse_genomes_project 5 119218261 119222449 - MGP_CBAJ_P0072795 Slc26a1 protein_coding protein_coding MGP_CBAJ_T0072796.1 MGP_CBAJ_G0029529.1 mouse_genomes_project 5 119218278 119222449 - MGP_CBAJ_P0072796 Slc26a1 protein_coding protein_coding MGP_CBAJ_T0072797.1 MGP_CBAJ_G0029529.1 mouse_genomes_project 5 119219811 119222481 - MGP_CBAJ_P0072797 Slc26a1 protein_coding protein_coding MGP_CBAJ_T0098404.1 MGP_CBAJ_G0036670.1 mouse_genomes_project 5 31121724 31124536 + Gm19409 sense_intronic sense_intronic MGP_CBAJ_T0004654.1 MGP_CBAJ_G0004025.1 mouse_genomes_project 5 107287397 107290247 - A730035I17Rik antisense antisense MGP_CBAJ_T0004655.1 MGP_CBAJ_G0004025.1 mouse_genomes_project 5 107287413 107289473 - A730035I17Rik antisense antisense MGP_CBAJ_T0004656.1 MGP_CBAJ_G0004025.1 mouse_genomes_project 5 107288300 107290045 - A730035I17Rik antisense antisense MGP_CBAJ_T0004657.1 MGP_CBAJ_G0004025.1 mouse_genomes_project 5 107288723 107289476 - A730035I17Rik antisense antisense MGP_CBAJ_T0004658.1 MGP_CBAJ_G0004025.1 mouse_genomes_project 5 107289558 107290247 - A730035I17Rik antisense pseudogene MGP_CBAJ_T0074923.1 MGP_CBAJ_G0029923.1 mouse_genomes_project 5 154190681 154198522 - MGP_CBAJ_P0074923 Mcm7 protein_coding protein_coding MGP_CBAJ_T0074924.1 MGP_CBAJ_G0029923.1 mouse_genomes_project 5 154190698 154191816 - Mcm7 protein_coding retained_intron MGP_CBAJ_T0074925.1 MGP_CBAJ_G0029923.1 mouse_genomes_project 5 154190698 154197918 - MGP_CBAJ_P0074925 Mcm7 protein_coding protein_coding MGP_CBAJ_T0074926.1 MGP_CBAJ_G0029923.1 mouse_genomes_project 5 154194159 154196481 - Mcm7 protein_coding retained_intron MGP_CBAJ_T0074927.1 MGP_CBAJ_G0029923.1 mouse_genomes_project 5 154194555 154197366 - MGP_CBAJ_P0074927 Mcm7 protein_coding protein_coding MGP_CBAJ_T0074928.1 MGP_CBAJ_G0029923.1 mouse_genomes_project 5 154194808 154195743 - Mcm7 protein_coding retained_intron MGP_CBAJ_T0074929.1 MGP_CBAJ_G0029923.1 mouse_genomes_project 5 154194977 154197117 - MGP_CBAJ_P0074929 Mcm7 protein_coding protein_coding MGP_CBAJ_T0074930.1 MGP_CBAJ_G0029923.1 mouse_genomes_project 5 154194978 154197915 - MGP_CBAJ_P0074930 Mcm7 protein_coding protein_coding MGP_CBAJ_T0074931.1 MGP_CBAJ_G0029923.1 mouse_genomes_project 5 154195308 154196761 - MGP_CBAJ_P0074931 Mcm7 protein_coding protein_coding MGP_CBAJ_T0074932.1 MGP_CBAJ_G0029923.1 mouse_genomes_project 5 154195510 154197341 - MGP_CBAJ_P0074932 Mcm7 protein_coding protein_coding MGP_CBAJ_T0001648.1 MGP_CBAJ_G0001566.1 mouse_genomes_project 5 78665785 78668260 - TEC TEC MGP_CBAJ_T0001858.1 MGP_CBAJ_G0001774.1 mouse_genomes_project 5 160418857 160419883 + TEC TEC MGP_CBAJ_T0070994.1 MGP_CBAJ_G0029168.1 mouse_genomes_project 5 38540160 38631334 + MGP_CBAJ_P0070994 Evc2 protein_coding protein_coding MGP_CBAJ_T0070995.1 MGP_CBAJ_G0029168.1 mouse_genomes_project 5 38540269 38592761 + Evc2 protein_coding retained_intron MGP_CBAJ_T0070996.1 MGP_CBAJ_G0029168.1 mouse_genomes_project 5 38594923 38597035 + Evc2 protein_coding processed_transcript MGP_CBAJ_T0070997.1 MGP_CBAJ_G0029168.1 mouse_genomes_project 5 38622158 38624214 + Evc2 protein_coding retained_intron MGP_CBAJ_T0072004.1 MGP_CBAJ_G0029345.1 mouse_genomes_project 5 94318270 94330019 - MGP_CBAJ_P0072004 Ugt2b1 protein_coding protein_coding MGP_CBAJ_T0073574.1 MGP_CBAJ_G0029689.1 mouse_genomes_project 5 134730881 134784365 + MGP_CBAJ_P0073574 Naa25 protein_coding protein_coding MGP_CBAJ_T0073575.1 MGP_CBAJ_G0029689.1 mouse_genomes_project 5 134730939 134780774 + MGP_CBAJ_P0073575 Naa25 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073576.1 MGP_CBAJ_G0029689.1 mouse_genomes_project 5 134730940 134764346 + Naa25 protein_coding retained_intron MGP_CBAJ_T0073577.1 MGP_CBAJ_G0029689.1 mouse_genomes_project 5 134730950 134781885 + MGP_CBAJ_P0073577 Naa25 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073579.1 MGP_CBAJ_G0029689.1 mouse_genomes_project 5 134781371 134786333 + MGP_CBAJ_P0073579 Naa25 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073580.1 MGP_CBAJ_G0029689.1 mouse_genomes_project 5 134781956 134782470 + Naa25 protein_coding processed_transcript MGP_CBAJ_T0070065.1 MGP_CBAJ_G0029011.1 mouse_genomes_project 5 24117708 24142715 - MGP_CBAJ_P0070065 protein_coding protein_coding MGP_CBAJ_T0098209.1 MGP_CBAJ_G0036482.1 mouse_genomes_project 5 100252786 100252915 - Gm22728 scaRNA scaRNA MGP_CBAJ_T0075165.1 MGP_CBAJ_G0029973.1 mouse_genomes_project 5 157422740 157426958 + Amz1 protein_coding processed_transcript MGP_CBAJ_T0075166.1 MGP_CBAJ_G0029973.1 mouse_genomes_project 5 157422740 157457875 + MGP_CBAJ_P0075166 Amz1 protein_coding protein_coding MGP_CBAJ_T0075167.1 MGP_CBAJ_G0029973.1 mouse_genomes_project 5 157422751 157423411 + Amz1 protein_coding processed_transcript MGP_CBAJ_T0075168.1 MGP_CBAJ_G0029973.1 mouse_genomes_project 5 157437890 157459256 + MGP_CBAJ_P0075168 Amz1 protein_coding protein_coding MGP_CBAJ_T0075169.1 MGP_CBAJ_G0029973.1 mouse_genomes_project 5 157437931 157445855 + Amz1 protein_coding processed_transcript MGP_CBAJ_T0075170.1 MGP_CBAJ_G0029973.1 mouse_genomes_project 5 157448299 157452705 + Amz1 protein_coding retained_intron MGP_CBAJ_T0075171.1 MGP_CBAJ_G0029973.1 mouse_genomes_project 5 157453808 157466004 + MGP_CBAJ_P0075171 Amz1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0008090.1 MGP_CBAJ_G0006585.1 mouse_genomes_project 5 94154943 94171842 - Gm43057 lincRNA lincRNA MGP_CBAJ_T0069912.1 MGP_CBAJ_G0028986.1 mouse_genomes_project 5 20974796 21009766 - MGP_CBAJ_P0069912 Dnajc2 protein_coding protein_coding MGP_CBAJ_T0069913.1 MGP_CBAJ_G0028986.1 mouse_genomes_project 5 20974798 21009634 - MGP_CBAJ_P0069913 Dnajc2 protein_coding protein_coding MGP_CBAJ_T0069914.1 MGP_CBAJ_G0028986.1 mouse_genomes_project 5 20974805 21009752 - Dnajc2 protein_coding retained_intron MGP_CBAJ_T0069915.1 MGP_CBAJ_G0028986.1 mouse_genomes_project 5 20985748 20993220 - Dnajc2 protein_coding retained_intron MGP_CBAJ_T0069916.1 MGP_CBAJ_G0028986.1 mouse_genomes_project 5 20997972 21009736 - Dnajc2 protein_coding retained_intron MGP_CBAJ_T0069917.1 MGP_CBAJ_G0028986.1 mouse_genomes_project 5 20998957 21009767 - MGP_CBAJ_P0069917 Dnajc2 protein_coding protein_coding MGP_CBAJ_T0099341.1 MGP_CBAJ_G0037596.1 mouse_genomes_project 5 32709049 32709156 + Gm26335 snRNA snRNA MGP_CBAJ_T0099407.1 MGP_CBAJ_G0037662.1 mouse_genomes_project 5 161144589 161144693 + Gm24311 snRNA snRNA MGP_CBAJ_T0072531.1 MGP_CBAJ_G0029473.1 mouse_genomes_project 5 113651558 113675870 - MGP_CBAJ_P0072531 Klhl8 protein_coding protein_coding MGP_CBAJ_T0072532.1 MGP_CBAJ_G0029473.1 mouse_genomes_project 5 113651558 113675870 - MGP_CBAJ_P0072532 Klhl8 protein_coding protein_coding MGP_CBAJ_T0072533.1 MGP_CBAJ_G0029473.1 mouse_genomes_project 5 113651635 113706097 - MGP_CBAJ_P0072533 Klhl8 protein_coding protein_coding MGP_CBAJ_T0072534.1 MGP_CBAJ_G0029473.1 mouse_genomes_project 5 113651665 113675870 - MGP_CBAJ_P0072534 Klhl8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072535.1 MGP_CBAJ_G0029473.1 mouse_genomes_project 5 113659903 113663964 - Klhl8 protein_coding retained_intron MGP_CBAJ_T0008154.1 MGP_CBAJ_G0006634.1 mouse_genomes_project 5 116813737 116814250 + Gm29464 lincRNA lincRNA MGP_CBAJ_T0074343.1 MGP_CBAJ_G0029816.1 mouse_genomes_project 5 149330273 149369840 - MGP_CBAJ_P0074343 Wbscr16 protein_coding protein_coding MGP_CBAJ_T0074344.1 MGP_CBAJ_G0029816.1 mouse_genomes_project 5 149341363 149362489 - Wbscr16 protein_coding retained_intron MGP_CBAJ_T0074345.1 MGP_CBAJ_G0029816.1 mouse_genomes_project 5 149355456 149358845 - Wbscr16 protein_coding retained_intron MGP_CBAJ_T0007964.1 MGP_CBAJ_G0006493.1 mouse_genomes_project 5 25472581 25474031 + Gm43972 lincRNA lincRNA MGP_CBAJ_T0073958.1 MGP_CBAJ_G0029747.1 mouse_genomes_project 5 137852515 137899970 + MGP_CBAJ_P0073958 Ccdc62 protein_coding protein_coding MGP_CBAJ_T0073959.1 MGP_CBAJ_G0029747.1 mouse_genomes_project 5 137852525 137860401 + Ccdc62 protein_coding retained_intron MGP_CBAJ_T0073960.1 MGP_CBAJ_G0029747.1 mouse_genomes_project 5 137852525 137899970 + MGP_CBAJ_P0073960 Ccdc62 protein_coding protein_coding MGP_CBAJ_T0073961.1 MGP_CBAJ_G0029747.1 mouse_genomes_project 5 137870475 137878618 + Ccdc62 protein_coding processed_transcript MGP_CBAJ_T0073962.1 MGP_CBAJ_G0029747.1 mouse_genomes_project 5 137878595 137881700 + Ccdc62 protein_coding retained_intron MGP_CBAJ_T0073963.1 MGP_CBAJ_G0029747.1 mouse_genomes_project 5 137889390 137893857 + Ccdc62 protein_coding retained_intron MGP_CBAJ_T0014666.1 MGP_CBAJ_G0012778.1 mouse_genomes_project 5 20350471 20350723 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014626.1 MGP_CBAJ_G0012738.1 mouse_genomes_project 5 361931 362112 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099333.1 MGP_CBAJ_G0037588.1 mouse_genomes_project 5 19279891 19279991 + Gm22755 snRNA snRNA MGP_CBAJ_T0001729.1 MGP_CBAJ_G0001647.1 mouse_genomes_project 5 124853074 124853987 - TEC TEC MGP_CBAJ_T0069828.1 MGP_CBAJ_G0028966.1 mouse_genomes_project 5 16154098 16162049 + MGP_CBAJ_P0069828 protein_coding protein_coding MGP_CBAJ_T0014799.1 MGP_CBAJ_G0012911.1 mouse_genomes_project 5 75714620 75715234 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0075699.1 MGP_CBAJ_G0030087.1 mouse_genomes_project 5 169173571 169332723 + MGP_CBAJ_P0075699 Pds5b protein_coding protein_coding MGP_CBAJ_T0075700.1 MGP_CBAJ_G0030087.1 mouse_genomes_project 5 169173571 169333548 + MGP_CBAJ_P0075700 Pds5b protein_coding protein_coding MGP_CBAJ_T0075701.1 MGP_CBAJ_G0030087.1 mouse_genomes_project 5 169173659 169333525 + MGP_CBAJ_P0075701 Pds5b protein_coding protein_coding MGP_CBAJ_T0075702.1 MGP_CBAJ_G0030087.1 mouse_genomes_project 5 169269894 169270686 + Pds5b protein_coding retained_intron MGP_CBAJ_T0075703.1 MGP_CBAJ_G0030087.1 mouse_genomes_project 5 169278338 169319518 + MGP_CBAJ_P0075703 Pds5b protein_coding protein_coding MGP_CBAJ_T0075704.1 MGP_CBAJ_G0030087.1 mouse_genomes_project 5 169281423 169291925 + Pds5b protein_coding processed_transcript MGP_CBAJ_T0075705.1 MGP_CBAJ_G0030087.1 mouse_genomes_project 5 169315674 169321807 + Pds5b protein_coding processed_transcript MGP_CBAJ_T0075706.1 MGP_CBAJ_G0030087.1 mouse_genomes_project 5 169328086 169333338 + Pds5b protein_coding retained_intron MGP_CBAJ_T0069775.1 MGP_CBAJ_G0028953.1 mouse_genomes_project 5 6967507 7203786 + MGP_CBAJ_P0069775 9330182L06Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0069776.1 MGP_CBAJ_G0028953.1 mouse_genomes_project 5 6967516 7183038 + MGP_CBAJ_P0069776 9330182L06Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0069777.1 MGP_CBAJ_G0028953.1 mouse_genomes_project 5 6967519 7127367 + 9330182L06Rik protein_coding retained_intron MGP_CBAJ_T0069778.1 MGP_CBAJ_G0028953.1 mouse_genomes_project 5 6967521 7183422 + MGP_CBAJ_P0069778 9330182L06Rik protein_coding protein_coding MGP_CBAJ_T0069779.1 MGP_CBAJ_G0028953.1 mouse_genomes_project 5 6967521 7204767 + MGP_CBAJ_P0069779 9330182L06Rik protein_coding protein_coding MGP_CBAJ_T0069780.1 MGP_CBAJ_G0028953.1 mouse_genomes_project 5 6967538 7205875 + MGP_CBAJ_P0069780 9330182L06Rik protein_coding protein_coding MGP_CBAJ_T0069781.1 MGP_CBAJ_G0028953.1 mouse_genomes_project 5 6967564 7180925 + MGP_CBAJ_P0069781 9330182L06Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0069782.1 MGP_CBAJ_G0028953.1 mouse_genomes_project 5 7135320 7140036 + 9330182L06Rik protein_coding retained_intron MGP_CBAJ_T0075467.1 MGP_CBAJ_G0030043.1 mouse_genomes_project 5 163785375 163806017 - MGP_CBAJ_P0075467 4930449I24Rik protein_coding protein_coding MGP_CBAJ_T0069757.1 MGP_CBAJ_G0028952.1 mouse_genomes_project 5 6813560 6855363 - MGP_CBAJ_P0069757 Dmtf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069758.1 MGP_CBAJ_G0028952.1 mouse_genomes_project 5 6813564 6855393 - MGP_CBAJ_P0069758 Dmtf1 protein_coding protein_coding MGP_CBAJ_T0069759.1 MGP_CBAJ_G0028952.1 mouse_genomes_project 5 6813565 6855403 - MGP_CBAJ_P0069759 Dmtf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069760.1 MGP_CBAJ_G0028952.1 mouse_genomes_project 5 6813565 6855396 - MGP_CBAJ_P0069760 Dmtf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069761.1 MGP_CBAJ_G0028952.1 mouse_genomes_project 5 6813569 6846695 - MGP_CBAJ_P0069761 Dmtf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069762.1 MGP_CBAJ_G0028952.1 mouse_genomes_project 5 6813569 6855387 - MGP_CBAJ_P0069762 Dmtf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069763.1 MGP_CBAJ_G0028952.1 mouse_genomes_project 5 6813762 6855315 - MGP_CBAJ_P0069763 Dmtf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069764.1 MGP_CBAJ_G0028952.1 mouse_genomes_project 5 6814485 6815424 - Dmtf1 protein_coding retained_intron MGP_CBAJ_T0069765.1 MGP_CBAJ_G0028952.1 mouse_genomes_project 5 6814721 6845449 - MGP_CBAJ_P0069765 Dmtf1 protein_coding protein_coding MGP_CBAJ_T0069766.1 MGP_CBAJ_G0028952.1 mouse_genomes_project 5 6816146 6821270 - MGP_CBAJ_P0069766 Dmtf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069767.1 MGP_CBAJ_G0028952.1 mouse_genomes_project 5 6816750 6855387 - Dmtf1 protein_coding processed_transcript MGP_CBAJ_T0069768.1 MGP_CBAJ_G0028952.1 mouse_genomes_project 5 6824059 6855381 - Dmtf1 protein_coding retained_intron MGP_CBAJ_T0069769.1 MGP_CBAJ_G0028952.1 mouse_genomes_project 5 6825980 6855360 - MGP_CBAJ_P0069769 Dmtf1 protein_coding protein_coding MGP_CBAJ_T0069770.1 MGP_CBAJ_G0028952.1 mouse_genomes_project 5 6827251 6845592 - MGP_CBAJ_P0069770 Dmtf1 protein_coding protein_coding MGP_CBAJ_T0069771.1 MGP_CBAJ_G0028952.1 mouse_genomes_project 5 6834502 6855378 - Dmtf1 protein_coding retained_intron MGP_CBAJ_T0069772.1 MGP_CBAJ_G0028952.1 mouse_genomes_project 5 6839914 6855393 - Dmtf1 protein_coding retained_intron MGP_CBAJ_T0069773.1 MGP_CBAJ_G0028952.1 mouse_genomes_project 5 6843980 6846485 - MGP_CBAJ_P0069773 Dmtf1 protein_coding protein_coding MGP_CBAJ_T0008338.1 MGP_CBAJ_G0006755.1 mouse_genomes_project 5 165132184 165132728 + Gm27033 lincRNA lincRNA MGP_CBAJ_T0014726.1 MGP_CBAJ_G0012838.1 mouse_genomes_project 5 36592477 36594264 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004743.1 MGP_CBAJ_G0004084.1 mouse_genomes_project 5 137156819 137171058 - Gm15860 antisense antisense MGP_CBAJ_T0004744.1 MGP_CBAJ_G0004084.1 mouse_genomes_project 5 137158431 137171160 - Gm15860 antisense antisense MGP_CBAJ_T0004745.1 MGP_CBAJ_G0004084.1 mouse_genomes_project 5 137158567 137168622 - Gm15860 antisense antisense MGP_CBAJ_T0004766.1 MGP_CBAJ_G0004099.1 mouse_genomes_project 5 146942349 146952357 + Gm42439 antisense antisense MGP_CBAJ_T0007940.1 MGP_CBAJ_G0006477.1 mouse_genomes_project 5 6965611 6967412 - Gm15734 lincRNA lincRNA MGP_CBAJ_T0075380.1 MGP_CBAJ_G0030020.1 mouse_genomes_project 5 162149103 162159069 - Smurf1 protein_coding retained_intron MGP_CBAJ_T0075381.1 MGP_CBAJ_G0030020.1 mouse_genomes_project 5 162149103 162239999 - MGP_CBAJ_P0075381 Smurf1 protein_coding protein_coding MGP_CBAJ_T0075382.1 MGP_CBAJ_G0030020.1 mouse_genomes_project 5 162149110 162240007 - MGP_CBAJ_P0075382 Smurf1 protein_coding protein_coding MGP_CBAJ_T0075383.1 MGP_CBAJ_G0030020.1 mouse_genomes_project 5 162151718 162240007 - MGP_CBAJ_P0075383 Smurf1 protein_coding protein_coding MGP_CBAJ_T0075384.1 MGP_CBAJ_G0030020.1 mouse_genomes_project 5 162157189 162170238 - MGP_CBAJ_P0075384 Smurf1 protein_coding protein_coding MGP_CBAJ_T0008091.1 MGP_CBAJ_G0006586.1 mouse_genomes_project 5 95453800 95459183 + BC037156 lincRNA lincRNA MGP_CBAJ_T0001688.1 MGP_CBAJ_G0001606.1 mouse_genomes_project 5 107084681 107086238 - TEC TEC MGP_CBAJ_T0008331.1 MGP_CBAJ_G0006749.1 mouse_genomes_project 5 160929076 160932104 + D130017N08Rik lincRNA lincRNA MGP_CBAJ_T0070270.1 MGP_CBAJ_G0029059.1 mouse_genomes_project 5 30939134 30949438 + MGP_CBAJ_P0070270 Slc35f6 protein_coding protein_coding MGP_CBAJ_T0070271.1 MGP_CBAJ_G0029059.1 mouse_genomes_project 5 30939146 30944478 + Slc35f6 protein_coding retained_intron MGP_CBAJ_T0070272.1 MGP_CBAJ_G0029059.1 mouse_genomes_project 5 30939160 30949385 + MGP_CBAJ_P0070272 Slc35f6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070273.1 MGP_CBAJ_G0029059.1 mouse_genomes_project 5 30939169 30947294 + Slc35f6 protein_coding retained_intron MGP_CBAJ_T0070274.1 MGP_CBAJ_G0029059.1 mouse_genomes_project 5 30939205 30949385 + MGP_CBAJ_P0070274 Slc35f6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070275.1 MGP_CBAJ_G0029059.1 mouse_genomes_project 5 30939215 30949043 + MGP_CBAJ_P0070275 Slc35f6 protein_coding protein_coding MGP_CBAJ_T0069574.1 MGP_CBAJ_G0028925.1 mouse_genomes_project 5 621692 649551 + MGP_CBAJ_P0069574 Tmbim7 protein_coding protein_coding MGP_CBAJ_T0069575.1 MGP_CBAJ_G0028925.1 mouse_genomes_project 5 631810 656956 + MGP_CBAJ_P0069575 Tmbim7 protein_coding protein_coding MGP_CBAJ_T0069576.1 MGP_CBAJ_G0028925.1 mouse_genomes_project 5 631985 643608 + Tmbim7 protein_coding retained_intron MGP_CBAJ_T0069577.1 MGP_CBAJ_G0028925.1 mouse_genomes_project 5 631986 657084 + MGP_CBAJ_P0069577 Tmbim7 protein_coding protein_coding MGP_CBAJ_T0069578.1 MGP_CBAJ_G0028925.1 mouse_genomes_project 5 638261 657865 + MGP_CBAJ_P0069578 Tmbim7 protein_coding protein_coding MGP_CBAJ_T0008016.1 MGP_CBAJ_G0006525.1 mouse_genomes_project 5 45286332 45290494 + Gm43021 lincRNA lincRNA MGP_CBAJ_T0098423.1 MGP_CBAJ_G0036688.1 mouse_genomes_project 5 152538474 152549262 - sense_intronic sense_intronic MGP_CBAJ_T0004813.1 MGP_CBAJ_G0004132.1 mouse_genomes_project 5 167783578 167843347 - Gm15997 antisense antisense MGP_CBAJ_T0072566.1 MGP_CBAJ_G0029485.1 mouse_genomes_project 5 114384687 114398948 + MGP_CBAJ_P0072566 BC005561 protein_coding protein_coding MGP_CBAJ_T0004771.1 MGP_CBAJ_G0004103.1 mouse_genomes_project 5 150050757 150157683 + Gm43278 antisense antisense MGP_CBAJ_T0071984.1 MGP_CBAJ_G0029339.1 mouse_genomes_project 5 93852378 93883655 - MGP_CBAJ_P0071984 Tmprss11g protein_coding protein_coding MGP_CBAJ_T0071985.1 MGP_CBAJ_G0029339.1 mouse_genomes_project 5 93852869 93883626 - MGP_CBAJ_P0071985 Tmprss11g protein_coding protein_coding MGP_CBAJ_T0071986.1 MGP_CBAJ_G0029339.1 mouse_genomes_project 5 93854857 93857143 - Tmprss11g protein_coding retained_intron MGP_CBAJ_T0008005.1 MGP_CBAJ_G0006516.1 mouse_genomes_project 5 40584260 40647135 - Gm43453 lincRNA lincRNA MGP_CBAJ_T0001440.1 MGP_CBAJ_G0001363.1 mouse_genomes_project 5 25109329 25113336 + TEC TEC MGP_CBAJ_T0071037.1 MGP_CBAJ_G0029176.1 mouse_genomes_project 5 39519972 39529439 + MGP_CBAJ_P0071037 Tmem128 protein_coding protein_coding MGP_CBAJ_T0071038.1 MGP_CBAJ_G0029176.1 mouse_genomes_project 5 39520158 39522099 + Tmem128 protein_coding retained_intron MGP_CBAJ_T0071039.1 MGP_CBAJ_G0029176.1 mouse_genomes_project 5 39520171 39527727 + MGP_CBAJ_P0071039 Tmem128 protein_coding protein_coding MGP_CBAJ_T0071040.1 MGP_CBAJ_G0029176.1 mouse_genomes_project 5 39520174 39525211 + Tmem128 protein_coding retained_intron MGP_CBAJ_T0071041.1 MGP_CBAJ_G0029176.1 mouse_genomes_project 5 39524714 39527724 + MGP_CBAJ_P0071041 Tmem128 protein_coding protein_coding MGP_CBAJ_T0074781.1 MGP_CBAJ_G0029892.1 mouse_genomes_project 5 153389162 153390150 - MGP_CBAJ_P0074781 Pop7 protein_coding protein_coding MGP_CBAJ_T0074782.1 MGP_CBAJ_G0029892.1 mouse_genomes_project 5 153389163 153390243 - MGP_CBAJ_P0074782 Pop7 protein_coding protein_coding MGP_CBAJ_T0014704.1 MGP_CBAJ_G0012816.1 mouse_genomes_project 5 29839124 29839416 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001491.1 MGP_CBAJ_G0001412.1 mouse_genomes_project 5 45816472 45817019 + TEC TEC MGP_CBAJ_T0072152.1 MGP_CBAJ_G0029391.1 mouse_genomes_project 5 98488336 98506482 + MGP_CBAJ_P0072152 Afp protein_coding protein_coding MGP_CBAJ_T0072153.1 MGP_CBAJ_G0029391.1 mouse_genomes_project 5 98488338 98493638 + MGP_CBAJ_P0072153 Afp protein_coding protein_coding MGP_CBAJ_T0072154.1 MGP_CBAJ_G0029391.1 mouse_genomes_project 5 98488816 98493688 + Afp protein_coding retained_intron MGP_CBAJ_T0072155.1 MGP_CBAJ_G0029391.1 mouse_genomes_project 5 98499108 98501747 + Afp protein_coding retained_intron MGP_CBAJ_T0072156.1 MGP_CBAJ_G0029391.1 mouse_genomes_project 5 98505006 98506428 + Afp protein_coding retained_intron MGP_CBAJ_T0099379.1 MGP_CBAJ_G0037634.1 mouse_genomes_project 5 113414531 113414702 + Gm25721 snRNA snRNA MGP_CBAJ_T0001672.1 MGP_CBAJ_G0001590.1 mouse_genomes_project 5 97378113 97380248 + TEC TEC MGP_CBAJ_T0004609.1 MGP_CBAJ_G0003985.1 mouse_genomes_project 5 50308958 50311601 - 4930518C09Rik antisense antisense MGP_CBAJ_T0074966.1 MGP_CBAJ_G0029932.1 mouse_genomes_project 5 154464661 154479731 - MGP_CBAJ_P0074966 Gm43720 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069789.1 MGP_CBAJ_G0028956.1 mouse_genomes_project 5 11257964 11497358 + Sema3a protein_coding processed_transcript MGP_CBAJ_T0069790.1 MGP_CBAJ_G0028956.1 mouse_genomes_project 5 11258042 11480199 + Sema3a protein_coding retained_intron MGP_CBAJ_T0069791.1 MGP_CBAJ_G0028956.1 mouse_genomes_project 5 11258143 11748057 + Sema3a protein_coding retained_intron MGP_CBAJ_T0069792.1 MGP_CBAJ_G0028956.1 mouse_genomes_project 5 11600462 11845469 + MGP_CBAJ_P0069792 Sema3a protein_coding protein_coding MGP_CBAJ_T0069793.1 MGP_CBAJ_G0028956.1 mouse_genomes_project 5 11603741 11661056 + MGP_CBAJ_P0069793 Sema3a protein_coding protein_coding MGP_CBAJ_T0069794.1 MGP_CBAJ_G0028956.1 mouse_genomes_project 5 11604050 11843829 + MGP_CBAJ_P0069794 Sema3a protein_coding protein_coding MGP_CBAJ_T0069795.1 MGP_CBAJ_G0028956.1 mouse_genomes_project 5 11604337 11847046 + MGP_CBAJ_P0069795 Sema3a protein_coding protein_coding MGP_CBAJ_T0069796.1 MGP_CBAJ_G0028956.1 mouse_genomes_project 5 11604352 11661026 + MGP_CBAJ_P0069796 Sema3a protein_coding protein_coding MGP_CBAJ_T0069797.1 MGP_CBAJ_G0028956.1 mouse_genomes_project 5 11604605 11715741 + Sema3a protein_coding processed_transcript MGP_CBAJ_T0001531.1 MGP_CBAJ_G0001451.1 mouse_genomes_project 5 51407135 51409679 - TEC TEC MGP_CBAJ_T0007990.1 MGP_CBAJ_G0006509.1 mouse_genomes_project 5 36389863 36399184 - E130018O15Rik lincRNA lincRNA MGP_CBAJ_T0008015.1 MGP_CBAJ_G0006524.1 mouse_genomes_project 5 45188103 45191294 + Gm43699 lincRNA lincRNA MGP_CBAJ_T0074304.1 MGP_CBAJ_G0029809.1 mouse_genomes_project 5 144961863 144995304 + Tyw1 protein_coding retained_intron MGP_CBAJ_T0074305.1 MGP_CBAJ_G0029809.1 mouse_genomes_project 5 144963808 144987675 + MGP_CBAJ_P0074305 Tyw1 protein_coding protein_coding MGP_CBAJ_T0074306.1 MGP_CBAJ_G0029809.1 mouse_genomes_project 5 144963808 145058906 + MGP_CBAJ_P0074306 Tyw1 protein_coding protein_coding MGP_CBAJ_T0074307.1 MGP_CBAJ_G0029809.1 mouse_genomes_project 5 144968885 144979334 + MGP_CBAJ_P0074307 Tyw1 protein_coding protein_coding MGP_CBAJ_T0001572.1 MGP_CBAJ_G0001492.1 mouse_genomes_project 5 61517230 61518585 + TEC TEC MGP_CBAJ_T0001429.1 MGP_CBAJ_G0001353.1 mouse_genomes_project 5 18101998 18105113 - TEC TEC MGP_CBAJ_T0001449.1 MGP_CBAJ_G0001372.1 mouse_genomes_project 5 31177559 31179624 - TEC TEC MGP_CBAJ_T0074820.1 MGP_CBAJ_G0029898.1 mouse_genomes_project 5 153514114 153520420 - Pcolce protein_coding retained_intron MGP_CBAJ_T0074821.1 MGP_CBAJ_G0029898.1 mouse_genomes_project 5 153514114 153520499 - MGP_CBAJ_P0074821 Pcolce protein_coding protein_coding MGP_CBAJ_T0074822.1 MGP_CBAJ_G0029898.1 mouse_genomes_project 5 153514116 153514810 - Pcolce protein_coding retained_intron MGP_CBAJ_T0074823.1 MGP_CBAJ_G0029898.1 mouse_genomes_project 5 153514116 153519486 - MGP_CBAJ_P0074823 Pcolce protein_coding protein_coding MGP_CBAJ_T0074824.1 MGP_CBAJ_G0029898.1 mouse_genomes_project 5 153514119 153520388 - MGP_CBAJ_P0074824 Pcolce protein_coding protein_coding MGP_CBAJ_T0074825.1 MGP_CBAJ_G0029898.1 mouse_genomes_project 5 153516029 153517204 - Pcolce protein_coding retained_intron MGP_CBAJ_T0074826.1 MGP_CBAJ_G0029898.1 mouse_genomes_project 5 153516096 153520355 - Pcolce protein_coding processed_transcript MGP_CBAJ_T0074827.1 MGP_CBAJ_G0029898.1 mouse_genomes_project 5 153516445 153519714 - MGP_CBAJ_P0074827 Pcolce protein_coding protein_coding MGP_CBAJ_T0074828.1 MGP_CBAJ_G0029898.1 mouse_genomes_project 5 153516521 153522774 - MGP_CBAJ_P0074828 Pcolce protein_coding protein_coding MGP_CBAJ_T0074829.1 MGP_CBAJ_G0029898.1 mouse_genomes_project 5 153516521 153522796 - MGP_CBAJ_P0074829 Pcolce protein_coding protein_coding MGP_CBAJ_T0074830.1 MGP_CBAJ_G0029898.1 mouse_genomes_project 5 153516732 153520331 - Pcolce protein_coding retained_intron MGP_CBAJ_T0074831.1 MGP_CBAJ_G0029898.1 mouse_genomes_project 5 153517950 153520338 - Pcolce protein_coding processed_transcript MGP_CBAJ_T0072183.1 MGP_CBAJ_G0029402.1 mouse_genomes_project 5 98968894 98975598 + Mthfd2l protein_coding processed_transcript MGP_CBAJ_T0072184.1 MGP_CBAJ_G0029402.1 mouse_genomes_project 5 98969033 98971199 + MGP_CBAJ_P0072184 Mthfd2l protein_coding protein_coding MGP_CBAJ_T0072185.1 MGP_CBAJ_G0029402.1 mouse_genomes_project 5 98969057 99064233 + MGP_CBAJ_P0072185 Mthfd2l protein_coding protein_coding MGP_CBAJ_T0072186.1 MGP_CBAJ_G0029402.1 mouse_genomes_project 5 98984763 99014417 + Mthfd2l protein_coding retained_intron MGP_CBAJ_T0004796.1 MGP_CBAJ_G0004120.1 mouse_genomes_project 5 158124751 158132496 - Gm16035 antisense antisense MGP_CBAJ_T0072939.1 MGP_CBAJ_G0029559.1 mouse_genomes_project 5 122205719 122207074 + MGP_CBAJ_P0072939 Chek2 protein_coding protein_coding MGP_CBAJ_T0072940.1 MGP_CBAJ_G0029559.1 mouse_genomes_project 5 122205723 122243094 + MGP_CBAJ_P0072940 Chek2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072941.1 MGP_CBAJ_G0029559.1 mouse_genomes_project 5 122205740 122243106 + MGP_CBAJ_P0072941 Chek2 protein_coding protein_coding MGP_CBAJ_T0072942.1 MGP_CBAJ_G0029559.1 mouse_genomes_project 5 122205969 122207080 + MGP_CBAJ_P0072942 Chek2 protein_coding protein_coding MGP_CBAJ_T0072943.1 MGP_CBAJ_G0029559.1 mouse_genomes_project 5 122207194 122219052 + Chek2 protein_coding retained_intron MGP_CBAJ_T0073225.1 MGP_CBAJ_G0029616.1 mouse_genomes_project 5 126966885 126975814 + MGP_CBAJ_P0073225 2210016L21Rik protein_coding protein_coding MGP_CBAJ_T0073226.1 MGP_CBAJ_G0029616.1 mouse_genomes_project 5 126966931 126972903 + 2210016L21Rik protein_coding retained_intron MGP_CBAJ_T0073227.1 MGP_CBAJ_G0029616.1 mouse_genomes_project 5 126966937 126972869 + MGP_CBAJ_P0073227 2210016L21Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0073228.1 MGP_CBAJ_G0029616.1 mouse_genomes_project 5 126966958 126972240 + 2210016L21Rik protein_coding retained_intron MGP_CBAJ_T0073229.1 MGP_CBAJ_G0029616.1 mouse_genomes_project 5 126971827 126973815 + MGP_CBAJ_P0073229 2210016L21Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0001454.1 MGP_CBAJ_G0001376.1 mouse_genomes_project 5 31933774 31935162 + TEC TEC MGP_CBAJ_T0072097.1 MGP_CBAJ_G0029379.1 mouse_genomes_project 5 96418844 96438526 - MGP_CBAJ_P0072097 Grsf1 protein_coding protein_coding MGP_CBAJ_T0072098.1 MGP_CBAJ_G0029379.1 mouse_genomes_project 5 96420402 96439200 - MGP_CBAJ_P0072098 Grsf1 protein_coding protein_coding MGP_CBAJ_T0072099.1 MGP_CBAJ_G0029379.1 mouse_genomes_project 5 96423487 96432261 - Grsf1 protein_coding retained_intron MGP_CBAJ_T0072100.1 MGP_CBAJ_G0029379.1 mouse_genomes_project 5 96436736 96438228 - Grsf1 protein_coding processed_transcript MGP_CBAJ_T0073502.1 MGP_CBAJ_G0029669.1 mouse_genomes_project 5 133540827 133615343 - MGP_CBAJ_P0073502 Tpcn1 protein_coding protein_coding MGP_CBAJ_T0073503.1 MGP_CBAJ_G0029669.1 mouse_genomes_project 5 133562786 133615282 - Tpcn1 protein_coding retained_intron MGP_CBAJ_T0073504.1 MGP_CBAJ_G0029669.1 mouse_genomes_project 5 133606786 133615264 - Tpcn1 protein_coding retained_intron MGP_CBAJ_T0073505.1 MGP_CBAJ_G0029669.1 mouse_genomes_project 5 133613826 133615269 - Tpcn1 protein_coding retained_intron MGP_CBAJ_T0004816.1 MGP_CBAJ_G0004135.1 mouse_genomes_project 5 169052743 169058946 - Gm42529 antisense antisense MGP_CBAJ_T0071252.1 MGP_CBAJ_G0029212.1 mouse_genomes_project 5 54878449 54918513 - MGP_CBAJ_P0071252 Dhx15 protein_coding protein_coding MGP_CBAJ_T0071253.1 MGP_CBAJ_G0029212.1 mouse_genomes_project 5 54878939 54918376 - MGP_CBAJ_P0071253 Dhx15 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071254.1 MGP_CBAJ_G0029212.1 mouse_genomes_project 5 54881570 54886047 - Dhx15 protein_coding retained_intron MGP_CBAJ_T0071255.1 MGP_CBAJ_G0029212.1 mouse_genomes_project 5 54881972 54918488 - MGP_CBAJ_P0071255 Dhx15 protein_coding protein_coding MGP_CBAJ_T0071256.1 MGP_CBAJ_G0029212.1 mouse_genomes_project 5 54886908 54889877 - Dhx15 protein_coding retained_intron MGP_CBAJ_T0071257.1 MGP_CBAJ_G0029212.1 mouse_genomes_project 5 54895004 54918493 - MGP_CBAJ_P0071257 Dhx15 protein_coding protein_coding MGP_CBAJ_T0071258.1 MGP_CBAJ_G0029212.1 mouse_genomes_project 5 54912813 54915413 - Dhx15 protein_coding retained_intron MGP_CBAJ_T0001582.1 MGP_CBAJ_G0001502.1 mouse_genomes_project 5 63825466 63828092 - TEC TEC MGP_CBAJ_T0014879.1 MGP_CBAJ_G0012991.1 mouse_genomes_project 5 116486262 116487118 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0071741.1 MGP_CBAJ_G0029297.1 mouse_genomes_project 5 79193235 79208263 - MGP_CBAJ_P0071741 Sgcb protein_coding protein_coding MGP_CBAJ_T0071742.1 MGP_CBAJ_G0029297.1 mouse_genomes_project 5 79204488 79204951 - Sgcb protein_coding retained_intron MGP_CBAJ_T0008149.1 MGP_CBAJ_G0006630.1 mouse_genomes_project 5 116583928 116589235 - lincRNA lincRNA MGP_CBAJ_T0014647.1 MGP_CBAJ_G0012759.1 mouse_genomes_project 5 10517058 10517839 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001432.1 MGP_CBAJ_G0001356.1 mouse_genomes_project 5 20262915 20263862 + TEC TEC MGP_CBAJ_T0075055.1 MGP_CBAJ_G0029947.1 mouse_genomes_project 5 155787480 155802540 - MGP_CBAJ_P0075055 Cox19 protein_coding protein_coding MGP_CBAJ_T0075056.1 MGP_CBAJ_G0029947.1 mouse_genomes_project 5 155789115 155802484 - Cox19 protein_coding processed_transcript MGP_CBAJ_T0075057.1 MGP_CBAJ_G0029947.1 mouse_genomes_project 5 155789433 155790869 - Cox19 protein_coding processed_transcript MGP_CBAJ_T0075058.1 MGP_CBAJ_G0029947.1 mouse_genomes_project 5 155789514 155812401 - MGP_CBAJ_P0075058 Cox19 protein_coding protein_coding MGP_CBAJ_T0075059.1 MGP_CBAJ_G0029947.1 mouse_genomes_project 5 155789603 155802432 - MGP_CBAJ_P0075059 Cox19 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075060.1 MGP_CBAJ_G0029947.1 mouse_genomes_project 5 155799325 155802467 - Cox19 protein_coding retained_intron MGP_CBAJ_T0075061.1 MGP_CBAJ_G0029947.1 mouse_genomes_project 5 155799494 155802472 - Cox19 protein_coding retained_intron MGP_CBAJ_T0075469.1 MGP_CBAJ_G0030045.1 mouse_genomes_project 5 163785375 163795009 - MGP_CBAJ_P0075469 Gm6309 protein_coding protein_coding MGP_CBAJ_T0098394.1 MGP_CBAJ_G0036660.1 mouse_genomes_project 5 511981 512733 + Gm43017 sense_intronic sense_intronic MGP_CBAJ_T0010596.1 MGP_CBAJ_G0008734.1 mouse_genomes_project 5 149839749 149839788 + Mir7228 miRNA miRNA MGP_CBAJ_T0071661.1 MGP_CBAJ_G0029283.1 mouse_genomes_project 5 77956991 77996002 - MGP_CBAJ_P0071661 Cnga1 protein_coding protein_coding MGP_CBAJ_T0071662.1 MGP_CBAJ_G0029283.1 mouse_genomes_project 5 77956991 77972314 - MGP_CBAJ_P0071662 Cnga1 protein_coding protein_coding MGP_CBAJ_T0071663.1 MGP_CBAJ_G0029283.1 mouse_genomes_project 5 77957410 77991139 - MGP_CBAJ_P0071663 Cnga1 protein_coding protein_coding MGP_CBAJ_T0071664.1 MGP_CBAJ_G0029283.1 mouse_genomes_project 5 77968293 77991144 - MGP_CBAJ_P0071664 Cnga1 protein_coding protein_coding MGP_CBAJ_T0071665.1 MGP_CBAJ_G0029283.1 mouse_genomes_project 5 77972188 77984367 - MGP_CBAJ_P0071665 Cnga1 protein_coding protein_coding MGP_CBAJ_T0071666.1 MGP_CBAJ_G0029283.1 mouse_genomes_project 5 77995521 77997534 - Cnga1 protein_coding retained_intron MGP_CBAJ_T0014953.1 MGP_CBAJ_G0013065.1 mouse_genomes_project 5 154013195 154013695 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008167.1 MGP_CBAJ_G0006643.1 mouse_genomes_project 5 121552553 121564750 + Gm26718 lincRNA lincRNA MGP_CBAJ_T0014670.1 MGP_CBAJ_G0012782.1 mouse_genomes_project 5 20966077 20966360 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004704.1 MGP_CBAJ_G0004057.1 mouse_genomes_project 5 127005724 127040874 + Hnf1aos1 antisense antisense MGP_CBAJ_T0004706.1 MGP_CBAJ_G0004057.1 mouse_genomes_project 5 127006837 127022709 + Hnf1aos1 antisense antisense MGP_CBAJ_T0004707.1 MGP_CBAJ_G0004057.1 mouse_genomes_project 5 127006860 127041067 + Hnf1aos1 antisense antisense MGP_CBAJ_T0001621.1 MGP_CBAJ_G0001540.1 mouse_genomes_project 5 71443124 71444694 + TEC TEC MGP_CBAJ_T0014933.1 MGP_CBAJ_G0013045.1 mouse_genomes_project 5 140012711 140013500 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008249.1 MGP_CBAJ_G0006697.1 mouse_genomes_project 5 136874775 136876764 + Gm38102 lincRNA lincRNA MGP_CBAJ_T0008253.1 MGP_CBAJ_G0006697.1 mouse_genomes_project 5 136876594 136878530 + Gm38102 lincRNA lincRNA MGP_CBAJ_T0008189.1 MGP_CBAJ_G0006655.1 mouse_genomes_project 5 123733720 123736960 + 1700028D13Rik lincRNA lincRNA MGP_CBAJ_T0008190.1 MGP_CBAJ_G0006655.1 mouse_genomes_project 5 123733763 123736962 + 1700028D13Rik lincRNA lincRNA MGP_CBAJ_T0008277.1 MGP_CBAJ_G0006710.1 mouse_genomes_project 5 140984121 140987096 - Gm43754 lincRNA lincRNA MGP_CBAJ_T0070347.1 MGP_CBAJ_G0029071.1 mouse_genomes_project 5 31366210 31378503 - MGP_CBAJ_P0070347 Slc5a6 protein_coding protein_coding MGP_CBAJ_T0070348.1 MGP_CBAJ_G0029071.1 mouse_genomes_project 5 31366210 31379425 - MGP_CBAJ_P0070348 Slc5a6 protein_coding protein_coding MGP_CBAJ_T0070349.1 MGP_CBAJ_G0029071.1 mouse_genomes_project 5 31366210 31379063 - MGP_CBAJ_P0070349 Slc5a6 protein_coding protein_coding MGP_CBAJ_T0070350.1 MGP_CBAJ_G0029071.1 mouse_genomes_project 5 31366211 31378510 - MGP_CBAJ_P0070350 Slc5a6 protein_coding protein_coding MGP_CBAJ_T0070351.1 MGP_CBAJ_G0029071.1 mouse_genomes_project 5 31367061 31368168 - Slc5a6 protein_coding retained_intron MGP_CBAJ_T0070352.1 MGP_CBAJ_G0029071.1 mouse_genomes_project 5 31369525 31372777 - MGP_CBAJ_P0070352 Slc5a6 protein_coding protein_coding MGP_CBAJ_T0070353.1 MGP_CBAJ_G0029071.1 mouse_genomes_project 5 31373266 31378580 - MGP_CBAJ_P0070353 Slc5a6 protein_coding protein_coding MGP_CBAJ_T0010553.1 MGP_CBAJ_G0008691.1 mouse_genomes_project 5 43586290 43586372 + Mir6414 miRNA miRNA MGP_CBAJ_T0008284.1 MGP_CBAJ_G0006715.1 mouse_genomes_project 5 141474839 141491148 + 4930572K03Rik lincRNA lincRNA MGP_CBAJ_T0008285.1 MGP_CBAJ_G0006715.1 mouse_genomes_project 5 141474844 141491162 + 4930572K03Rik lincRNA lincRNA MGP_CBAJ_T0001533.1 MGP_CBAJ_G0001453.1 mouse_genomes_project 5 51422456 51423788 - TEC TEC MGP_CBAJ_T0004778.1 MGP_CBAJ_G0004108.1 mouse_genomes_project 5 151667966 151669799 - Gm15701 antisense antisense MGP_CBAJ_T0001640.1 MGP_CBAJ_G0001559.1 mouse_genomes_project 5 74360413 74364774 - TEC TEC MGP_CBAJ_T0004768.1 MGP_CBAJ_G0004101.1 mouse_genomes_project 5 149812805 149822223 + Gm42884 antisense antisense MGP_CBAJ_T0004769.1 MGP_CBAJ_G0004101.1 mouse_genomes_project 5 149817253 149822423 + Gm42884 antisense antisense MGP_CBAJ_T0004758.1 MGP_CBAJ_G0004093.1 mouse_genomes_project 5 141575481 141596167 - Tmem132cos antisense antisense MGP_CBAJ_T0004759.1 MGP_CBAJ_G0004093.1 mouse_genomes_project 5 141575497 141596127 - Tmem132cos antisense antisense MGP_CBAJ_T0004760.1 MGP_CBAJ_G0004093.1 mouse_genomes_project 5 141575559 141596130 - Tmem132cos antisense antisense MGP_CBAJ_T0070293.1 MGP_CBAJ_G0029062.1 mouse_genomes_project 5 31119010 31174902 + MGP_CBAJ_P0070293 Mapre3 protein_coding protein_coding MGP_CBAJ_T0070294.1 MGP_CBAJ_G0029062.1 mouse_genomes_project 5 31119102 31174855 + Mapre3 protein_coding retained_intron MGP_CBAJ_T0070295.1 MGP_CBAJ_G0029062.1 mouse_genomes_project 5 31119123 31174855 + MGP_CBAJ_P0070295 Mapre3 protein_coding protein_coding MGP_CBAJ_T0070296.1 MGP_CBAJ_G0029062.1 mouse_genomes_project 5 31119129 31171373 + Mapre3 protein_coding retained_intron MGP_CBAJ_T0070297.1 MGP_CBAJ_G0029062.1 mouse_genomes_project 5 31162594 31172154 + MGP_CBAJ_P0070297 Mapre3 protein_coding protein_coding MGP_CBAJ_T0070298.1 MGP_CBAJ_G0029062.1 mouse_genomes_project 5 31173317 31174051 + Mapre3 protein_coding retained_intron MGP_CBAJ_T0008204.1 MGP_CBAJ_G0006663.1 mouse_genomes_project 5 125708939 125710442 - Gm42797 lincRNA lincRNA MGP_CBAJ_T0069677.1 MGP_CBAJ_G0028939.1 mouse_genomes_project 5 4207116 4907046 - MGP_CBAJ_P0069677 Zfp804b protein_coding protein_coding MGP_CBAJ_T0069678.1 MGP_CBAJ_G0028939.1 mouse_genomes_project 5 4207136 4330935 - MGP_CBAJ_P0069678 Zfp804b protein_coding protein_coding MGP_CBAJ_T0075671.1 MGP_CBAJ_G0030084.1 mouse_genomes_project 5 169010722 169018460 + Brca2 protein_coding retained_intron MGP_CBAJ_T0075672.1 MGP_CBAJ_G0030084.1 mouse_genomes_project 5 169010722 169062269 + MGP_CBAJ_P0075672 Brca2 protein_coding protein_coding MGP_CBAJ_T0075673.1 MGP_CBAJ_G0030084.1 mouse_genomes_project 5 169010724 169025626 + Brca2 protein_coding retained_intron MGP_CBAJ_T0075674.1 MGP_CBAJ_G0030084.1 mouse_genomes_project 5 169010724 169028398 + MGP_CBAJ_P0075674 Brca2 protein_coding protein_coding MGP_CBAJ_T0075675.1 MGP_CBAJ_G0030084.1 mouse_genomes_project 5 169010736 169062270 + MGP_CBAJ_P0075675 Brca2 protein_coding protein_coding MGP_CBAJ_T0075676.1 MGP_CBAJ_G0030084.1 mouse_genomes_project 5 169010782 169016613 + Brca2 protein_coding processed_transcript MGP_CBAJ_T0075677.1 MGP_CBAJ_G0030084.1 mouse_genomes_project 5 169017804 169021022 + Brca2 protein_coding processed_transcript MGP_CBAJ_T0075678.1 MGP_CBAJ_G0030084.1 mouse_genomes_project 5 169041939 169044174 + Brca2 protein_coding retained_intron MGP_CBAJ_T0075679.1 MGP_CBAJ_G0030084.1 mouse_genomes_project 5 169043449 169049430 + Brca2 protein_coding retained_intron MGP_CBAJ_T0075680.1 MGP_CBAJ_G0030084.1 mouse_genomes_project 5 169049500 169052615 + Brca2 protein_coding retained_intron MGP_CBAJ_T0075681.1 MGP_CBAJ_G0030084.1 mouse_genomes_project 5 169059060 169062269 + Brca2 protein_coding processed_transcript MGP_CBAJ_T0075682.1 MGP_CBAJ_G0030084.1 mouse_genomes_project 5 169059341 169061855 + Brca2 protein_coding retained_intron MGP_CBAJ_T0075683.1 MGP_CBAJ_G0030084.1 mouse_genomes_project 5 169061103 169062852 + Brca2 protein_coding retained_intron MGP_CBAJ_T0004637.1 MGP_CBAJ_G0004010.1 mouse_genomes_project 5 82141202 82141854 + Gm7467 antisense antisense MGP_CBAJ_T0001739.1 MGP_CBAJ_G0001657.1 mouse_genomes_project 5 127583167 127585405 - TEC TEC MGP_CBAJ_T0001832.1 MGP_CBAJ_G0001749.1 mouse_genomes_project 5 147500233 147502398 - TEC TEC MGP_CBAJ_T0073951.1 MGP_CBAJ_G0029744.1 mouse_genomes_project 5 137790510 137793795 - MGP_CBAJ_P0073951 Hcar1 protein_coding protein_coding MGP_CBAJ_T0008013.1 MGP_CBAJ_G0006522.1 mouse_genomes_project 5 44832551 44836876 - Gm42711 lincRNA lincRNA MGP_CBAJ_T0074642.1 MGP_CBAJ_G0029866.1 mouse_genomes_project 5 151701498 151705865 + MGP_CBAJ_P0074642 Alkbh4 protein_coding protein_coding MGP_CBAJ_T0074643.1 MGP_CBAJ_G0029866.1 mouse_genomes_project 5 151701506 151706965 + MGP_CBAJ_P0074643 Alkbh4 protein_coding protein_coding MGP_CBAJ_T0074644.1 MGP_CBAJ_G0029866.1 mouse_genomes_project 5 151701510 151706131 + MGP_CBAJ_P0074644 Alkbh4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074645.1 MGP_CBAJ_G0029866.1 mouse_genomes_project 5 151701554 151705856 + MGP_CBAJ_P0074645 Alkbh4 protein_coding protein_coding MGP_CBAJ_T0074646.1 MGP_CBAJ_G0029866.1 mouse_genomes_project 5 151704133 151706968 + MGP_CBAJ_P0074646 Alkbh4 protein_coding protein_coding MGP_CBAJ_T0008094.1 MGP_CBAJ_G0006589.1 mouse_genomes_project 5 98966034 98968205 + Gm42530 lincRNA lincRNA MGP_CBAJ_T0014991.1 MGP_CBAJ_G0013103.1 mouse_genomes_project 5 165854501 165854976 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0072452.1 MGP_CBAJ_G0029459.1 mouse_genomes_project 5 110126157 110173392 - MGP_CBAJ_P0072452 Hpse protein_coding protein_coding MGP_CBAJ_T0072453.1 MGP_CBAJ_G0029459.1 mouse_genomes_project 5 110131231 110173381 - MGP_CBAJ_P0072453 Hpse protein_coding protein_coding MGP_CBAJ_T0008166.1 MGP_CBAJ_G0006642.1 mouse_genomes_project 5 120589131 121328666 - lincRNA lincRNA MGP_CBAJ_T0001661.1 MGP_CBAJ_G0001579.1 mouse_genomes_project 5 80741736 80744583 - TEC TEC MGP_CBAJ_T0073000.1 MGP_CBAJ_G0029573.1 mouse_genomes_project 5 124009302 124011632 + MGP_CBAJ_P0073000 Gm6588 protein_coding protein_coding MGP_CBAJ_T0014932.1 MGP_CBAJ_G0013044.1 mouse_genomes_project 5 139550078 139550775 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0070145.1 MGP_CBAJ_G0029030.1 mouse_genomes_project 5 27444768 27447153 - MGP_CBAJ_P0070145 protein_coding protein_coding MGP_CBAJ_T0008212.1 MGP_CBAJ_G0006667.1 mouse_genomes_project 5 127498091 127499515 - 4930401G09Rik lincRNA lincRNA MGP_CBAJ_T0014911.1 MGP_CBAJ_G0013023.1 mouse_genomes_project 5 126806075 126806718 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0072310.1 MGP_CBAJ_G0029428.1 mouse_genomes_project 5 101559468 101588318 - MGP_CBAJ_P0072310 Ccni protein_coding protein_coding MGP_CBAJ_T0072311.1 MGP_CBAJ_G0029428.1 mouse_genomes_project 5 101567315 101568084 - Ccni protein_coding retained_intron MGP_CBAJ_T0072312.1 MGP_CBAJ_G0029428.1 mouse_genomes_project 5 101567624 101584294 - MGP_CBAJ_P0072312 Ccni protein_coding protein_coding MGP_CBAJ_T0072313.1 MGP_CBAJ_G0029428.1 mouse_genomes_project 5 101569427 101588251 - MGP_CBAJ_P0072313 Ccni protein_coding protein_coding MGP_CBAJ_T0100620.1 MGP_CBAJ_G0038875.1 mouse_genomes_project 5 90573599 90573731 - Gm25765 snoRNA snoRNA MGP_CBAJ_T0014894.1 MGP_CBAJ_G0013006.1 mouse_genomes_project 5 119642002 119645101 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001481.1 MGP_CBAJ_G0001402.1 mouse_genomes_project 5 40985312 40988730 - TEC TEC MGP_CBAJ_T0074579.1 MGP_CBAJ_G0029855.1 mouse_genomes_project 5 151286614 151329124 + Srrm3 protein_coding retained_intron MGP_CBAJ_T0074580.1 MGP_CBAJ_G0029855.1 mouse_genomes_project 5 151286621 151339441 + MGP_CBAJ_P0074580 Srrm3 protein_coding protein_coding MGP_CBAJ_T0074581.1 MGP_CBAJ_G0029855.1 mouse_genomes_project 5 151302080 151362409 + MGP_CBAJ_P0074581 Srrm3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074582.1 MGP_CBAJ_G0029855.1 mouse_genomes_project 5 151302080 151364072 + MGP_CBAJ_P0074582 Srrm3 protein_coding protein_coding MGP_CBAJ_T0074583.1 MGP_CBAJ_G0029855.1 mouse_genomes_project 5 151341629 151346824 + Srrm3 protein_coding retained_intron MGP_CBAJ_T0074584.1 MGP_CBAJ_G0029855.1 mouse_genomes_project 5 151355942 151357534 + Srrm3 protein_coding retained_intron MGP_CBAJ_T0071188.1 MGP_CBAJ_G0029206.1 mouse_genomes_project 5 47784500 47955748 - MGP_CBAJ_P0071188 Lcorl protein_coding protein_coding MGP_CBAJ_T0071189.1 MGP_CBAJ_G0029206.1 mouse_genomes_project 5 47784503 47955600 - MGP_CBAJ_P0071189 Lcorl protein_coding protein_coding MGP_CBAJ_T0071191.1 MGP_CBAJ_G0029206.1 mouse_genomes_project 5 47787779 47954696 - MGP_CBAJ_P0071191 Lcorl protein_coding protein_coding MGP_CBAJ_T0071192.1 MGP_CBAJ_G0029206.1 mouse_genomes_project 5 47788783 47810589 - Lcorl protein_coding processed_transcript MGP_CBAJ_T0071193.1 MGP_CBAJ_G0029206.1 mouse_genomes_project 5 47806951 47814864 - Lcorl protein_coding retained_intron MGP_CBAJ_T0071194.1 MGP_CBAJ_G0029206.1 mouse_genomes_project 5 47820785 47955630 - MGP_CBAJ_P0071194 Lcorl protein_coding protein_coding MGP_CBAJ_T0071195.1 MGP_CBAJ_G0029206.1 mouse_genomes_project 5 47834573 47955600 - MGP_CBAJ_P0071195 Lcorl protein_coding protein_coding MGP_CBAJ_T0071196.1 MGP_CBAJ_G0029206.1 mouse_genomes_project 5 47834594 47955614 - MGP_CBAJ_P0071196 Lcorl protein_coding nonsense_mediated_decay MGP_CBAJ_T0071197.1 MGP_CBAJ_G0029206.1 mouse_genomes_project 5 47867113 47955634 - Lcorl protein_coding processed_transcript MGP_CBAJ_T0071198.1 MGP_CBAJ_G0029206.1 mouse_genomes_project 5 47868794 47955748 - Lcorl protein_coding retained_intron MGP_CBAJ_T0071199.1 MGP_CBAJ_G0029206.1 mouse_genomes_project 5 47868964 47955621 - MGP_CBAJ_P0071199 Lcorl protein_coding protein_coding MGP_CBAJ_T0072370.1 MGP_CBAJ_G0029444.1 mouse_genomes_project 5 107715020 107716070 + MGP_CBAJ_P0072370 Gm11111 protein_coding protein_coding MGP_CBAJ_T0101943.1 MGP_CBAJ_G0039974.1 mouse_genomes_project 5 94845619 94847279 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0008211.1 MGP_CBAJ_G0006666.1 mouse_genomes_project 5 127480140 127485970 + lincRNA lincRNA MGP_CBAJ_T0008356.1 MGP_CBAJ_G0006770.1 mouse_genomes_project 5 167375092 167384370 + Gm42788 lincRNA lincRNA MGP_CBAJ_T0014659.1 MGP_CBAJ_G0012771.1 mouse_genomes_project 5 17658486 17659084 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0073234.1 MGP_CBAJ_G0029618.1 mouse_genomes_project 5 127057452 127167880 + MGP_CBAJ_P0073234 Sppl3 protein_coding protein_coding MGP_CBAJ_T0073235.1 MGP_CBAJ_G0029618.1 mouse_genomes_project 5 127057461 127117817 + Sppl3 protein_coding processed_transcript MGP_CBAJ_T0073236.1 MGP_CBAJ_G0029618.1 mouse_genomes_project 5 127057818 127150863 + MGP_CBAJ_P0073236 Sppl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073237.1 MGP_CBAJ_G0029618.1 mouse_genomes_project 5 127138512 127140993 + Sppl3 protein_coding retained_intron MGP_CBAJ_T0073238.1 MGP_CBAJ_G0029618.1 mouse_genomes_project 5 127163846 127167346 + Sppl3 protein_coding retained_intron MGP_CBAJ_T0074955.1 MGP_CBAJ_G0029930.1 mouse_genomes_project 5 154459348 154463704 - MGP_CBAJ_P0074955 BC037034 protein_coding protein_coding MGP_CBAJ_T0074956.1 MGP_CBAJ_G0029930.1 mouse_genomes_project 5 154459350 154463050 - MGP_CBAJ_P0074956 BC037034 protein_coding protein_coding MGP_CBAJ_T0074957.1 MGP_CBAJ_G0029930.1 mouse_genomes_project 5 154459351 154463700 - MGP_CBAJ_P0074957 BC037034 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074958.1 MGP_CBAJ_G0029930.1 mouse_genomes_project 5 154459352 154463743 - BC037034 protein_coding retained_intron MGP_CBAJ_T0074959.1 MGP_CBAJ_G0029930.1 mouse_genomes_project 5 154459814 154460655 - MGP_CBAJ_P0074959 BC037034 protein_coding protein_coding MGP_CBAJ_T0074960.1 MGP_CBAJ_G0029930.1 mouse_genomes_project 5 154461279 154461904 - BC037034 protein_coding retained_intron MGP_CBAJ_T0074961.1 MGP_CBAJ_G0029930.1 mouse_genomes_project 5 154461962 154462848 - BC037034 protein_coding retained_intron MGP_CBAJ_T0004801.1 MGP_CBAJ_G0004123.1 mouse_genomes_project 5 160511798 160524744 - Gm20635 antisense antisense MGP_CBAJ_T0074715.1 MGP_CBAJ_G0029878.1 mouse_genomes_project 5 152762351 152769270 + MGP_CBAJ_P0074715 Vgf protein_coding protein_coding MGP_CBAJ_T0074716.1 MGP_CBAJ_G0029878.1 mouse_genomes_project 5 152766213 152769270 + MGP_CBAJ_P0074716 Vgf protein_coding protein_coding MGP_CBAJ_T0074717.1 MGP_CBAJ_G0029878.1 mouse_genomes_project 5 152766282 152768947 + MGP_CBAJ_P0074717 Vgf protein_coding protein_coding MGP_CBAJ_T0074718.1 MGP_CBAJ_G0029878.1 mouse_genomes_project 5 152766619 152767326 + MGP_CBAJ_P0074718 Vgf protein_coding protein_coding MGP_CBAJ_T0004732.1 MGP_CBAJ_G0004074.1 mouse_genomes_project 5 134703866 134726422 + antisense antisense MGP_CBAJ_T0075173.1 MGP_CBAJ_G0029975.1 mouse_genomes_project 5 157574838 157700537 - MGP_CBAJ_P0075173 Card11 protein_coding protein_coding MGP_CBAJ_T0075174.1 MGP_CBAJ_G0029975.1 mouse_genomes_project 5 157574840 157584050 - Card11 protein_coding retained_intron MGP_CBAJ_T0075175.1 MGP_CBAJ_G0029975.1 mouse_genomes_project 5 157613381 157700426 - Card11 protein_coding retained_intron MGP_CBAJ_T0004682.1 MGP_CBAJ_G0004038.1 mouse_genomes_project 5 117740768 117752780 - Gm42902 antisense antisense MGP_CBAJ_T0074918.1 MGP_CBAJ_G0029922.1 mouse_genomes_project 5 154187169 154190745 + MGP_CBAJ_P0074918 Cops6 protein_coding protein_coding MGP_CBAJ_T0074919.1 MGP_CBAJ_G0029922.1 mouse_genomes_project 5 154187198 154190077 + MGP_CBAJ_P0074919 Cops6 protein_coding protein_coding MGP_CBAJ_T0074920.1 MGP_CBAJ_G0029922.1 mouse_genomes_project 5 154187207 154188483 + Cops6 protein_coding retained_intron MGP_CBAJ_T0074921.1 MGP_CBAJ_G0029922.1 mouse_genomes_project 5 154187267 154190238 + Cops6 protein_coding retained_intron MGP_CBAJ_T0074922.1 MGP_CBAJ_G0029922.1 mouse_genomes_project 5 154188875 154190018 + MGP_CBAJ_P0074922 Cops6 protein_coding protein_coding MGP_CBAJ_T0004675.1 MGP_CBAJ_G0004034.1 mouse_genomes_project 5 112132482 112143142 - 1700013M08Rik antisense antisense MGP_CBAJ_T0004676.1 MGP_CBAJ_G0004034.1 mouse_genomes_project 5 112137366 112138164 - 1700013M08Rik antisense antisense MGP_CBAJ_T0004618.1 MGP_CBAJ_G0003994.1 mouse_genomes_project 5 70801404 70825237 + Gm26725 antisense antisense MGP_CBAJ_T0072174.1 MGP_CBAJ_G0029398.1 mouse_genomes_project 5 98821064 98824560 + Cxcl3 protein_coding retained_intron MGP_CBAJ_T0072175.1 MGP_CBAJ_G0029398.1 mouse_genomes_project 5 98821064 98823053 + MGP_CBAJ_P0072175 Cxcl3 protein_coding protein_coding MGP_CBAJ_T0075317.1 MGP_CBAJ_G0030007.1 mouse_genomes_project 5 161032368 161058555 + Pms2 protein_coding retained_intron MGP_CBAJ_T0075318.1 MGP_CBAJ_G0030007.1 mouse_genomes_project 5 161032368 161058555 + Pms2 protein_coding processed_transcript MGP_CBAJ_T0075319.1 MGP_CBAJ_G0030007.1 mouse_genomes_project 5 161032368 161058555 + MGP_CBAJ_P0075319 Pms2 protein_coding protein_coding MGP_CBAJ_T0075320.1 MGP_CBAJ_G0030007.1 mouse_genomes_project 5 161032394 161055798 + Pms2 protein_coding processed_transcript MGP_CBAJ_T0075321.1 MGP_CBAJ_G0030007.1 mouse_genomes_project 5 161032394 161056035 + Pms2 protein_coding processed_transcript MGP_CBAJ_T0075322.1 MGP_CBAJ_G0030007.1 mouse_genomes_project 5 161032403 161040379 + Pms2 protein_coding processed_transcript MGP_CBAJ_T0075323.1 MGP_CBAJ_G0030007.1 mouse_genomes_project 5 161032408 161037503 + Pms2 protein_coding processed_transcript MGP_CBAJ_T0075324.1 MGP_CBAJ_G0030007.1 mouse_genomes_project 5 161032429 161049598 + Pms2 protein_coding retained_intron MGP_CBAJ_T0075325.1 MGP_CBAJ_G0030007.1 mouse_genomes_project 5 161032429 161036696 + Pms2 protein_coding retained_intron MGP_CBAJ_T0075326.1 MGP_CBAJ_G0030007.1 mouse_genomes_project 5 161032461 161055752 + MGP_CBAJ_P0075326 Pms2 protein_coding protein_coding MGP_CBAJ_T0075327.1 MGP_CBAJ_G0030007.1 mouse_genomes_project 5 161032565 161035865 + Pms2 protein_coding processed_transcript MGP_CBAJ_T0075328.1 MGP_CBAJ_G0030007.1 mouse_genomes_project 5 161035722 161036317 + Pms2 protein_coding retained_intron MGP_CBAJ_T0075329.1 MGP_CBAJ_G0030007.1 mouse_genomes_project 5 161042299 161048207 + MGP_CBAJ_P0075329 Pms2 protein_coding protein_coding MGP_CBAJ_T0001864.1 MGP_CBAJ_G0001780.1 mouse_genomes_project 5 162681952 162688171 + TEC TEC MGP_CBAJ_T0071399.1 MGP_CBAJ_G0029242.1 mouse_genomes_project 5 69686849 69760365 + MGP_CBAJ_P0071399 Wdr19 protein_coding protein_coding MGP_CBAJ_T0071400.1 MGP_CBAJ_G0029242.1 mouse_genomes_project 5 69686851 69760374 + MGP_CBAJ_P0071400 Wdr19 protein_coding protein_coding MGP_CBAJ_T0071401.1 MGP_CBAJ_G0029242.1 mouse_genomes_project 5 69686853 69692468 + Wdr19 protein_coding retained_intron MGP_CBAJ_T0071402.1 MGP_CBAJ_G0029242.1 mouse_genomes_project 5 69686870 69744673 + Wdr19 protein_coding retained_intron MGP_CBAJ_T0071403.1 MGP_CBAJ_G0029242.1 mouse_genomes_project 5 69686884 69723290 + Wdr19 protein_coding retained_intron MGP_CBAJ_T0071404.1 MGP_CBAJ_G0029242.1 mouse_genomes_project 5 69686893 69716579 + Wdr19 protein_coding retained_intron MGP_CBAJ_T0071405.1 MGP_CBAJ_G0029242.1 mouse_genomes_project 5 69689768 69760369 + Wdr19 protein_coding retained_intron MGP_CBAJ_T0071406.1 MGP_CBAJ_G0029242.1 mouse_genomes_project 5 69756383 69760368 + MGP_CBAJ_P0071406 Wdr19 protein_coding protein_coding MGP_CBAJ_T0001488.1 MGP_CBAJ_G0001409.1 mouse_genomes_project 5 45597019 45598382 - TEC TEC MGP_CBAJ_T0070385.1 MGP_CBAJ_G0029076.1 mouse_genomes_project 5 31466595 31492024 + MGP_CBAJ_P0070385 Trim54 protein_coding protein_coding MGP_CBAJ_T0070386.1 MGP_CBAJ_G0029076.1 mouse_genomes_project 5 31466617 31492026 + MGP_CBAJ_P0070386 Trim54 protein_coding protein_coding MGP_CBAJ_T0101136.1 MGP_CBAJ_G0039329.1 mouse_genomes_project 5 78908610 78909474 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101137.1 MGP_CBAJ_G0039329.1 mouse_genomes_project 5 78908655 78920977 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101138.1 MGP_CBAJ_G0039329.1 mouse_genomes_project 5 78920800 78921254 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0099382.1 MGP_CBAJ_G0037637.1 mouse_genomes_project 5 116246592 116246699 - Gm25672 snRNA snRNA MGP_CBAJ_T0099371.1 MGP_CBAJ_G0037626.1 mouse_genomes_project 5 94333196 94333302 - Gm24121 snRNA snRNA MGP_CBAJ_T0073894.1 MGP_CBAJ_G0029738.1 mouse_genomes_project 5 137398454 137433199 - MGP_CBAJ_P0073894 Vps33a protein_coding protein_coding MGP_CBAJ_T0073895.1 MGP_CBAJ_G0029738.1 mouse_genomes_project 5 137412901 137417642 - Vps33a protein_coding retained_intron MGP_CBAJ_T0073896.1 MGP_CBAJ_G0029738.1 mouse_genomes_project 5 137421984 137429751 - Vps33a protein_coding retained_intron MGP_CBAJ_T0073897.1 MGP_CBAJ_G0029738.1 mouse_genomes_project 5 137423686 137433140 - MGP_CBAJ_P0073897 Vps33a protein_coding nonsense_mediated_decay MGP_CBAJ_T0001590.1 MGP_CBAJ_G0001509.1 mouse_genomes_project 5 69421577 69423875 + TEC TEC MGP_CBAJ_T0073068.1 MGP_CBAJ_G0029587.1 mouse_genomes_project 5 125554572 125561365 - MGP_CBAJ_P0073068 Tmem119 protein_coding protein_coding MGP_CBAJ_T0073069.1 MGP_CBAJ_G0029587.1 mouse_genomes_project 5 125556481 125561295 - MGP_CBAJ_P0073069 Tmem119 protein_coding protein_coding MGP_CBAJ_T0007979.1 MGP_CBAJ_G0006502.1 mouse_genomes_project 5 32052949 32054752 - AI839979 lincRNA lincRNA MGP_CBAJ_T0007980.1 MGP_CBAJ_G0006502.1 mouse_genomes_project 5 32053459 32054746 - AI839979 lincRNA lincRNA MGP_CBAJ_T0008339.1 MGP_CBAJ_G0006756.1 mouse_genomes_project 5 165311699 165317725 + D5Ertd605e lincRNA lincRNA MGP_CBAJ_T0098419.1 MGP_CBAJ_G0036685.1 mouse_genomes_project 5 144370478 144371818 + Gm15903 sense_intronic sense_intronic MGP_CBAJ_T0098420.1 MGP_CBAJ_G0036685.1 mouse_genomes_project 5 144371604 144375115 + Gm15903 sense_intronic sense_intronic MGP_CBAJ_T0073451.1 MGP_CBAJ_G0029658.1 mouse_genomes_project 5 130801149 130861583 - MGP_CBAJ_P0073451 Rnft2 protein_coding protein_coding MGP_CBAJ_T0073452.1 MGP_CBAJ_G0029658.1 mouse_genomes_project 5 130801155 130861838 - MGP_CBAJ_P0073452 Rnft2 protein_coding protein_coding MGP_CBAJ_T0073453.1 MGP_CBAJ_G0029658.1 mouse_genomes_project 5 130804044 130845871 - Rnft2 protein_coding retained_intron MGP_CBAJ_T0073454.1 MGP_CBAJ_G0029658.1 mouse_genomes_project 5 130804526 130814910 - MGP_CBAJ_P0073454 Rnft2 protein_coding protein_coding MGP_CBAJ_T0073455.1 MGP_CBAJ_G0029658.1 mouse_genomes_project 5 130850865 130861716 - MGP_CBAJ_P0073455 Rnft2 protein_coding protein_coding MGP_CBAJ_T0073456.1 MGP_CBAJ_G0029658.1 mouse_genomes_project 5 130853636 130859635 - Rnft2 protein_coding retained_intron MGP_CBAJ_T0073457.1 MGP_CBAJ_G0029658.1 mouse_genomes_project 5 130854214 130861714 - MGP_CBAJ_P0073457 Rnft2 protein_coding protein_coding MGP_CBAJ_T0075247.1 MGP_CBAJ_G0029990.1 mouse_genomes_project 5 160241036 160278921 + MGP_CBAJ_P0075247 Spdye4b protein_coding protein_coding MGP_CBAJ_T0075248.1 MGP_CBAJ_G0029990.1 mouse_genomes_project 5 160242272 160278262 + MGP_CBAJ_P0075248 Spdye4b protein_coding protein_coding MGP_CBAJ_T0075249.1 MGP_CBAJ_G0029990.1 mouse_genomes_project 5 160259989 160278401 + Spdye4b protein_coding processed_transcript MGP_CBAJ_T0075250.1 MGP_CBAJ_G0029990.1 mouse_genomes_project 5 160259994 160278059 + Spdye4b protein_coding processed_transcript MGP_CBAJ_T0101141.1 MGP_CBAJ_G0039332.1 mouse_genomes_project 5 83582887 83583274 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101142.1 MGP_CBAJ_G0039332.1 mouse_genomes_project 5 83582903 83583458 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0099404.1 MGP_CBAJ_G0037659.1 mouse_genomes_project 5 154583710 154583817 + Gm25525 snRNA snRNA MGP_CBAJ_T0070258.1 MGP_CBAJ_G0029055.1 mouse_genomes_project 5 30618330 30732843 - MGP_CBAJ_P0070258 Otof protein_coding protein_coding MGP_CBAJ_T0070259.1 MGP_CBAJ_G0029055.1 mouse_genomes_project 5 30618330 30732813 - MGP_CBAJ_P0070259 Otof protein_coding protein_coding MGP_CBAJ_T0070260.1 MGP_CBAJ_G0029055.1 mouse_genomes_project 5 30618336 30732843 - Otof protein_coding retained_intron MGP_CBAJ_T0070261.1 MGP_CBAJ_G0029055.1 mouse_genomes_project 5 30618563 30732770 - Otof protein_coding retained_intron MGP_CBAJ_T0070262.1 MGP_CBAJ_G0029055.1 mouse_genomes_project 5 30666885 30670038 - Otof protein_coding retained_intron MGP_CBAJ_T0004590.1 MGP_CBAJ_G0003974.1 mouse_genomes_project 5 39585651 39589216 - Gm26560 antisense antisense MGP_CBAJ_T0074171.1 MGP_CBAJ_G0029784.1 mouse_genomes_project 5 143201123 143247096 + MGP_CBAJ_P0074171 Piwil1 protein_coding protein_coding MGP_CBAJ_T0074172.1 MGP_CBAJ_G0029784.1 mouse_genomes_project 5 143230757 143255207 + MGP_CBAJ_P0074172 Piwil1 protein_coding protein_coding MGP_CBAJ_T0074173.1 MGP_CBAJ_G0029784.1 mouse_genomes_project 5 143232073 143254340 + MGP_CBAJ_P0074173 Piwil1 protein_coding protein_coding MGP_CBAJ_T0001599.1 MGP_CBAJ_G0001518.1 mouse_genomes_project 5 70174435 70177258 + TEC TEC MGP_CBAJ_T0099339.1 MGP_CBAJ_G0037594.1 mouse_genomes_project 5 29601008 29601115 - Gm24538 snRNA snRNA MGP_CBAJ_T0001722.1 MGP_CBAJ_G0001640.1 mouse_genomes_project 5 122820234 122822357 + TEC TEC MGP_CBAJ_T0075577.1 MGP_CBAJ_G0030069.1 mouse_genomes_project 5 166388502 166481935 - MGP_CBAJ_P0075577 Slc7a1 protein_coding protein_coding MGP_CBAJ_T0075578.1 MGP_CBAJ_G0030069.1 mouse_genomes_project 5 166395610 166474896 - MGP_CBAJ_P0075578 Slc7a1 protein_coding protein_coding MGP_CBAJ_T0075579.1 MGP_CBAJ_G0030069.1 mouse_genomes_project 5 166401845 166403996 - Slc7a1 protein_coding retained_intron MGP_CBAJ_T0075580.1 MGP_CBAJ_G0030069.1 mouse_genomes_project 5 166403347 166481822 - MGP_CBAJ_P0075580 Slc7a1 protein_coding protein_coding MGP_CBAJ_T0075581.1 MGP_CBAJ_G0030069.1 mouse_genomes_project 5 166415900 166445994 - MGP_CBAJ_P0075581 Slc7a1 protein_coding protein_coding MGP_CBAJ_T0075582.1 MGP_CBAJ_G0030069.1 mouse_genomes_project 5 166473497 166475729 - Slc7a1 protein_coding retained_intron MGP_CBAJ_T0007961.1 MGP_CBAJ_G0006490.1 mouse_genomes_project 5 25264321 25266796 + 4831440E17Rik lincRNA lincRNA MGP_CBAJ_T0008279.1 MGP_CBAJ_G0006712.1 mouse_genomes_project 5 141139438 141175151 + Gm42954 lincRNA lincRNA MGP_CBAJ_T0072813.1 MGP_CBAJ_G0029538.1 mouse_genomes_project 5 120199633 120229263 + MGP_CBAJ_P0072813 Vmn2r16 protein_coding protein_coding MGP_CBAJ_T0014962.1 MGP_CBAJ_G0013074.1 mouse_genomes_project 5 157235841 157236245 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0075341.1 MGP_CBAJ_G0030011.1 mouse_genomes_project 5 161150505 161157271 - MGP_CBAJ_P0075341 Ocm protein_coding protein_coding MGP_CBAJ_T0075342.1 MGP_CBAJ_G0030011.1 mouse_genomes_project 5 161150777 161156378 - MGP_CBAJ_P0075342 Ocm protein_coding protein_coding MGP_CBAJ_T0075343.1 MGP_CBAJ_G0030011.1 mouse_genomes_project 5 161155111 161157342 - MGP_CBAJ_P0075343 Ocm protein_coding protein_coding MGP_CBAJ_T0008311.1 MGP_CBAJ_G0006731.1 mouse_genomes_project 5 152944949 152970602 - lincRNA lincRNA MGP_CBAJ_T0001842.1 MGP_CBAJ_G0001758.1 mouse_genomes_project 5 150283009 150284631 - TEC TEC MGP_CBAJ_T0014997.1 MGP_CBAJ_G0013109.1 mouse_genomes_project 5 168686479 168686867 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0072122.1 MGP_CBAJ_G0029386.1 mouse_genomes_project 5 98078264 98080593 - MGP_CBAJ_P0072122 Gps2 protein_coding protein_coding MGP_CBAJ_T0072123.1 MGP_CBAJ_G0029386.1 mouse_genomes_project 5 98078265 98080583 - MGP_CBAJ_P0072123 Gps2 protein_coding protein_coding MGP_CBAJ_T0072124.1 MGP_CBAJ_G0029386.1 mouse_genomes_project 5 98078279 98080583 - MGP_CBAJ_P0072124 Gps2 protein_coding protein_coding MGP_CBAJ_T0072125.1 MGP_CBAJ_G0029386.1 mouse_genomes_project 5 98078299 98078815 - MGP_CBAJ_P0072125 Gps2 protein_coding protein_coding MGP_CBAJ_T0072126.1 MGP_CBAJ_G0029386.1 mouse_genomes_project 5 98078975 98080011 - Gps2 protein_coding processed_transcript MGP_CBAJ_T0008066.1 MGP_CBAJ_G0006566.1 mouse_genomes_project 5 80667228 80686294 + Gm6116 lincRNA lincRNA MGP_CBAJ_T0101147.1 MGP_CBAJ_G0039335.1 mouse_genomes_project 5 126806075 126806695 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101928.1 MGP_CBAJ_G0039959.1 mouse_genomes_project 5 361937 362105 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0014744.1 MGP_CBAJ_G0012856.1 mouse_genomes_project 5 49945064 49945869 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004677.1 MGP_CBAJ_G0004035.1 mouse_genomes_project 5 113263013 113283216 - Gm42620 antisense antisense MGP_CBAJ_T0073149.1 MGP_CBAJ_G0029601.1 mouse_genomes_project 5 126336278 126352392 - MGP_CBAJ_P0073149 Mmab protein_coding protein_coding MGP_CBAJ_T0073150.1 MGP_CBAJ_G0029601.1 mouse_genomes_project 5 126338444 126352353 - MGP_CBAJ_P0073150 Mmab protein_coding protein_coding MGP_CBAJ_T0073151.1 MGP_CBAJ_G0029601.1 mouse_genomes_project 5 126339872 126352324 - MGP_CBAJ_P0073151 Mmab protein_coding protein_coding MGP_CBAJ_T0098409.1 MGP_CBAJ_G0036675.1 mouse_genomes_project 5 78691286 78693776 - Gm17207 sense_intronic sense_intronic MGP_CBAJ_T0071477.1 MGP_CBAJ_G0029253.1 mouse_genomes_project 5 70471729 70509948 + MGP_CBAJ_P0071477 Rhoh protein_coding protein_coding MGP_CBAJ_T0071478.1 MGP_CBAJ_G0029253.1 mouse_genomes_project 5 70476390 70506691 + MGP_CBAJ_P0071478 Rhoh protein_coding protein_coding MGP_CBAJ_T0071479.1 MGP_CBAJ_G0029253.1 mouse_genomes_project 5 70476963 70481319 + Rhoh protein_coding processed_transcript MGP_CBAJ_T0071480.1 MGP_CBAJ_G0029253.1 mouse_genomes_project 5 70477001 70481779 + Rhoh protein_coding retained_intron MGP_CBAJ_T0008225.1 MGP_CBAJ_G0006677.1 mouse_genomes_project 5 129787616 129793412 - lincRNA lincRNA MGP_CBAJ_T0074181.1 MGP_CBAJ_G0029786.1 mouse_genomes_project 5 143512696 143536710 - MGP_CBAJ_P0074181 Stx2 protein_coding protein_coding MGP_CBAJ_T0074182.1 MGP_CBAJ_G0029786.1 mouse_genomes_project 5 143512702 143536671 - MGP_CBAJ_P0074182 Stx2 protein_coding protein_coding MGP_CBAJ_T0074183.1 MGP_CBAJ_G0029786.1 mouse_genomes_project 5 143514294 143517298 - Stx2 protein_coding retained_intron MGP_CBAJ_T0074184.1 MGP_CBAJ_G0029786.1 mouse_genomes_project 5 143516804 143517989 - Stx2 protein_coding retained_intron MGP_CBAJ_T0074185.1 MGP_CBAJ_G0029786.1 mouse_genomes_project 5 143517047 143536559 - Stx2 protein_coding processed_transcript MGP_CBAJ_T0074186.1 MGP_CBAJ_G0029786.1 mouse_genomes_project 5 143518780 143536685 - Stx2 protein_coding retained_intron MGP_CBAJ_T0074187.1 MGP_CBAJ_G0029786.1 mouse_genomes_project 5 143521634 143536580 - MGP_CBAJ_P0074187 Stx2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074188.1 MGP_CBAJ_G0029786.1 mouse_genomes_project 5 143521648 143527769 - MGP_CBAJ_P0074188 Stx2 protein_coding protein_coding MGP_CBAJ_T0074189.1 MGP_CBAJ_G0029786.1 mouse_genomes_project 5 143527221 143536682 - Stx2 protein_coding retained_intron MGP_CBAJ_T0014862.1 MGP_CBAJ_G0012974.1 mouse_genomes_project 5 108863695 108864504 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014739.1 MGP_CBAJ_G0012851.1 mouse_genomes_project 5 45780797 45782559 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0069918.1 MGP_CBAJ_G0028987.1 mouse_genomes_project 5 21009864 21034098 + MGP_CBAJ_P0069918 Psmc2 protein_coding protein_coding MGP_CBAJ_T0069733.1 MGP_CBAJ_G0028947.1 mouse_genomes_project 5 6290156 6391939 + MGP_CBAJ_P0069733 Abcb1a protein_coding protein_coding MGP_CBAJ_T0069734.1 MGP_CBAJ_G0028947.1 mouse_genomes_project 5 6290189 6376078 + MGP_CBAJ_P0069734 Abcb1a protein_coding unknown_likely_coding MGP_CBAJ_T0069735.1 MGP_CBAJ_G0028947.1 mouse_genomes_project 5 6290193 6375930 + MGP_CBAJ_P0069735 Abcb1a protein_coding unknown_likely_coding MGP_CBAJ_T0069736.1 MGP_CBAJ_G0028947.1 mouse_genomes_project 5 6360659 6391934 + Abcb1a protein_coding retained_intron MGP_CBAJ_T0069737.1 MGP_CBAJ_G0028947.1 mouse_genomes_project 5 6360689 6364015 + Abcb1a protein_coding processed_transcript MGP_CBAJ_T0014826.1 MGP_CBAJ_G0012938.1 mouse_genomes_project 5 91722068 91723185 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004748.1 MGP_CBAJ_G0004086.1 mouse_genomes_project 5 138176964 138177885 + Pitpnm2os2 antisense antisense MGP_CBAJ_T0004749.1 MGP_CBAJ_G0004086.1 mouse_genomes_project 5 138177017 138182419 + Pitpnm2os2 antisense antisense MGP_CBAJ_T0004750.1 MGP_CBAJ_G0004086.1 mouse_genomes_project 5 138177699 138180172 + Pitpnm2os2 antisense antisense MGP_CBAJ_T0001800.1 MGP_CBAJ_G0001717.1 mouse_genomes_project 5 143229944 143230613 - TEC TEC MGP_CBAJ_T0098413.1 MGP_CBAJ_G0036679.1 mouse_genomes_project 5 115687340 115688714 + C230066G23Rik sense_intronic sense_intronic MGP_CBAJ_T0072550.1 MGP_CBAJ_G0029478.1 mouse_genomes_project 5 113902852 113943327 - MGP_CBAJ_P0072550 Sparcl1 protein_coding protein_coding MGP_CBAJ_T0072551.1 MGP_CBAJ_G0029478.1 mouse_genomes_project 5 113919522 113943033 - MGP_CBAJ_P0072551 Sparcl1 protein_coding protein_coding MGP_CBAJ_T0004752.1 MGP_CBAJ_G0004088.1 mouse_genomes_project 5 138228624 138229336 + Gm42425 antisense antisense MGP_CBAJ_T0074901.1 MGP_CBAJ_G0029917.1 mouse_genomes_project 5 154057753 154059812 + MGP_CBAJ_P0074901 protein_coding protein_coding MGP_CBAJ_T0001732.1 MGP_CBAJ_G0001650.1 mouse_genomes_project 5 125628974 125632254 + TEC TEC MGP_CBAJ_T0073584.1 MGP_CBAJ_G0029691.1 mouse_genomes_project 5 134793849 134880026 + MGP_CBAJ_P0073584 Tmem116 protein_coding protein_coding MGP_CBAJ_T0073585.1 MGP_CBAJ_G0029691.1 mouse_genomes_project 5 134794531 134839861 + MGP_CBAJ_P0073585 Tmem116 protein_coding protein_coding MGP_CBAJ_T0073586.1 MGP_CBAJ_G0029691.1 mouse_genomes_project 5 134794531 134838879 + MGP_CBAJ_P0073586 Tmem116 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073587.1 MGP_CBAJ_G0029691.1 mouse_genomes_project 5 134794581 134826937 + MGP_CBAJ_P0073587 Tmem116 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073588.1 MGP_CBAJ_G0029691.1 mouse_genomes_project 5 134794662 134826937 + Tmem116 protein_coding processed_transcript MGP_CBAJ_T0073589.1 MGP_CBAJ_G0029691.1 mouse_genomes_project 5 134801191 134838711 + MGP_CBAJ_P0073589 Tmem116 protein_coding protein_coding MGP_CBAJ_T0073590.1 MGP_CBAJ_G0029691.1 mouse_genomes_project 5 134806031 134839868 + MGP_CBAJ_P0073590 Tmem116 protein_coding protein_coding MGP_CBAJ_T0073591.1 MGP_CBAJ_G0029691.1 mouse_genomes_project 5 134806031 134839841 + MGP_CBAJ_P0073591 Tmem116 protein_coding protein_coding MGP_CBAJ_T0074709.1 MGP_CBAJ_G0029877.1 mouse_genomes_project 5 152703893 152713531 + MGP_CBAJ_P0074709 Plod3 protein_coding protein_coding MGP_CBAJ_T0074710.1 MGP_CBAJ_G0029877.1 mouse_genomes_project 5 152704252 152708972 + Plod3 protein_coding retained_intron MGP_CBAJ_T0074711.1 MGP_CBAJ_G0029877.1 mouse_genomes_project 5 152704350 152709589 + Plod3 protein_coding retained_intron MGP_CBAJ_T0074712.1 MGP_CBAJ_G0029877.1 mouse_genomes_project 5 152707189 152711063 + Plod3 protein_coding retained_intron MGP_CBAJ_T0074713.1 MGP_CBAJ_G0029877.1 mouse_genomes_project 5 152707385 152708972 + Plod3 protein_coding retained_intron MGP_CBAJ_T0074714.1 MGP_CBAJ_G0029877.1 mouse_genomes_project 5 152708507 152712061 + MGP_CBAJ_P0074714 Plod3 protein_coding protein_coding MGP_CBAJ_T0072709.1 MGP_CBAJ_G0029514.1 mouse_genomes_project 5 118319331 118404830 - MGP_CBAJ_P0072709 Fam69a protein_coding protein_coding MGP_CBAJ_T0072710.1 MGP_CBAJ_G0029514.1 mouse_genomes_project 5 118320981 118404798 - MGP_CBAJ_P0072710 Fam69a protein_coding protein_coding MGP_CBAJ_T0072711.1 MGP_CBAJ_G0029514.1 mouse_genomes_project 5 118325631 118388575 - MGP_CBAJ_P0072711 Fam69a protein_coding protein_coding MGP_CBAJ_T0072438.1 MGP_CBAJ_G0029456.1 mouse_genomes_project 5 109929319 109960220 + MGP_CBAJ_P0072438 Cops4 protein_coding protein_coding MGP_CBAJ_T0072439.1 MGP_CBAJ_G0029456.1 mouse_genomes_project 5 109929453 109943043 + Cops4 protein_coding retained_intron MGP_CBAJ_T0072440.1 MGP_CBAJ_G0029456.1 mouse_genomes_project 5 109929467 109948417 + MGP_CBAJ_P0072440 Cops4 protein_coding protein_coding MGP_CBAJ_T0072441.1 MGP_CBAJ_G0029456.1 mouse_genomes_project 5 109929482 109944339 + MGP_CBAJ_P0072441 Cops4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072442.1 MGP_CBAJ_G0029456.1 mouse_genomes_project 5 109929747 109948303 + MGP_CBAJ_P0072442 Cops4 protein_coding protein_coding MGP_CBAJ_T0072443.1 MGP_CBAJ_G0029456.1 mouse_genomes_project 5 109939590 109956379 + MGP_CBAJ_P0072443 Cops4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072444.1 MGP_CBAJ_G0029456.1 mouse_genomes_project 5 109943189 109960197 + Cops4 protein_coding retained_intron MGP_CBAJ_T0014754.1 MGP_CBAJ_G0012866.1 mouse_genomes_project 5 55716600 55720671 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001803.1 MGP_CBAJ_G0001720.1 mouse_genomes_project 5 144610943 144614328 + TEC TEC MGP_CBAJ_T0075346.1 MGP_CBAJ_G0030014.1 mouse_genomes_project 5 161351252 161379967 - MGP_CBAJ_P0075346 Tecpr1 protein_coding protein_coding MGP_CBAJ_T0075347.1 MGP_CBAJ_G0030014.1 mouse_genomes_project 5 161352150 161379899 - Tecpr1 protein_coding retained_intron MGP_CBAJ_T0075348.1 MGP_CBAJ_G0030014.1 mouse_genomes_project 5 161352926 161354995 - Tecpr1 protein_coding retained_intron MGP_CBAJ_T0075349.1 MGP_CBAJ_G0030014.1 mouse_genomes_project 5 161352931 161355811 - Tecpr1 protein_coding retained_intron MGP_CBAJ_T0075350.1 MGP_CBAJ_G0030014.1 mouse_genomes_project 5 161355383 161356585 - Tecpr1 protein_coding retained_intron MGP_CBAJ_T0075351.1 MGP_CBAJ_G0030014.1 mouse_genomes_project 5 161357286 161360382 - Tecpr1 protein_coding retained_intron MGP_CBAJ_T0075352.1 MGP_CBAJ_G0030014.1 mouse_genomes_project 5 161364284 161365441 - Tecpr1 protein_coding processed_transcript MGP_CBAJ_T0075353.1 MGP_CBAJ_G0030014.1 mouse_genomes_project 5 161365997 161372009 - Tecpr1 protein_coding retained_intron MGP_CBAJ_T0075354.1 MGP_CBAJ_G0030014.1 mouse_genomes_project 5 161366006 161379904 - Tecpr1 protein_coding retained_intron MGP_CBAJ_T0075355.1 MGP_CBAJ_G0030014.1 mouse_genomes_project 5 161368719 161379958 - Tecpr1 protein_coding retained_intron MGP_CBAJ_T0075356.1 MGP_CBAJ_G0030014.1 mouse_genomes_project 5 161374669 161379910 - Tecpr1 protein_coding retained_intron MGP_CBAJ_T0075357.1 MGP_CBAJ_G0030014.1 mouse_genomes_project 5 161376739 161379875 - Tecpr1 protein_coding retained_intron MGP_CBAJ_T0075026.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155642685 155694053 + MGP_CBAJ_P0075026 Sun1 protein_coding protein_coding MGP_CBAJ_T0075027.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155642691 155694008 + MGP_CBAJ_P0075027 Sun1 protein_coding protein_coding MGP_CBAJ_T0075028.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155642708 155694008 + MGP_CBAJ_P0075028 Sun1 protein_coding protein_coding MGP_CBAJ_T0075029.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155642715 155672552 + Sun1 protein_coding retained_intron MGP_CBAJ_T0075030.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155642715 155672553 + MGP_CBAJ_P0075030 Sun1 protein_coding protein_coding MGP_CBAJ_T0075031.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155642717 155667952 + MGP_CBAJ_P0075031 Sun1 protein_coding protein_coding MGP_CBAJ_T0075032.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155642719 155670811 + MGP_CBAJ_P0075032 Sun1 protein_coding protein_coding MGP_CBAJ_T0075033.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155642723 155661811 + Sun1 protein_coding retained_intron MGP_CBAJ_T0075034.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155642728 155692762 + MGP_CBAJ_P0075034 Sun1 protein_coding protein_coding MGP_CBAJ_T0075035.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155642733 155670817 + MGP_CBAJ_P0075035 Sun1 protein_coding protein_coding MGP_CBAJ_T0075036.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155657975 155658323 + Sun1 protein_coding processed_transcript MGP_CBAJ_T0075037.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155658007 155669610 + MGP_CBAJ_P0075037 Sun1 protein_coding protein_coding MGP_CBAJ_T0075038.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155658061 155692856 + MGP_CBAJ_P0075038 Sun1 protein_coding protein_coding MGP_CBAJ_T0075039.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155658301 155669574 + MGP_CBAJ_P0075039 Sun1 protein_coding protein_coding MGP_CBAJ_T0075040.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155667890 155675045 + Sun1 protein_coding processed_transcript MGP_CBAJ_T0075041.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155669488 155674152 + MGP_CBAJ_P0075041 Sun1 protein_coding protein_coding MGP_CBAJ_T0075042.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155670955 155679838 + MGP_CBAJ_P0075042 Sun1 protein_coding protein_coding MGP_CBAJ_T0075043.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155675316 155678756 + Sun1 protein_coding retained_intron MGP_CBAJ_T0075044.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155679789 155689580 + MGP_CBAJ_P0075044 Sun1 protein_coding protein_coding MGP_CBAJ_T0075045.1 MGP_CBAJ_G0029944.1 mouse_genomes_project 5 155685566 155692719 + MGP_CBAJ_P0075045 Sun1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0014872.1 MGP_CBAJ_G0012984.1 mouse_genomes_project 5 113379557 113380133 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001618.1 MGP_CBAJ_G0001537.1 mouse_genomes_project 5 71224657 71227041 - TEC TEC MGP_CBAJ_T0072519.1 MGP_CBAJ_G0029471.1 mouse_genomes_project 5 113398866 113412316 - MGP_CBAJ_P0072519 1700016H13Rik protein_coding protein_coding MGP_CBAJ_T0072520.1 MGP_CBAJ_G0029471.1 mouse_genomes_project 5 113399253 113412038 - MGP_CBAJ_P0072520 1700016H13Rik protein_coding protein_coding MGP_CBAJ_T0072521.1 MGP_CBAJ_G0029471.1 mouse_genomes_project 5 113399411 113412029 - MGP_CBAJ_P0072521 1700016H13Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0072522.1 MGP_CBAJ_G0029471.1 mouse_genomes_project 5 113399417 113412054 - MGP_CBAJ_P0072522 1700016H13Rik protein_coding protein_coding MGP_CBAJ_T0072523.1 MGP_CBAJ_G0029471.1 mouse_genomes_project 5 113399522 113412029 - MGP_CBAJ_P0072523 1700016H13Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0072524.1 MGP_CBAJ_G0029471.1 mouse_genomes_project 5 113399595 113412029 - MGP_CBAJ_P0072524 1700016H13Rik protein_coding protein_coding MGP_CBAJ_T0072525.1 MGP_CBAJ_G0029471.1 mouse_genomes_project 5 113399595 113412030 - MGP_CBAJ_P0072525 1700016H13Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0001602.1 MGP_CBAJ_G0001521.1 mouse_genomes_project 5 70250079 70252442 - TEC TEC MGP_CBAJ_T0071090.1 MGP_CBAJ_G0029187.1 mouse_genomes_project 5 43772914 43947816 + MGP_CBAJ_P0071090 Gm16223 protein_coding protein_coding MGP_CBAJ_T0001500.1 MGP_CBAJ_G0001421.1 mouse_genomes_project 5 46522201 46522340 + TEC TEC MGP_CBAJ_T0072379.1 MGP_CBAJ_G0029447.1 mouse_genomes_project 5 108438648 108476452 - MGP_CBAJ_P0072379 protein_coding protein_coding MGP_CBAJ_T0072380.1 MGP_CBAJ_G0029447.1 mouse_genomes_project 5 108438648 108476452 - MGP_CBAJ_P0072380 protein_coding protein_coding MGP_CBAJ_T0072381.1 MGP_CBAJ_G0029447.1 mouse_genomes_project 5 108439996 108464472 - MGP_CBAJ_P0072381 protein_coding protein_coding MGP_CBAJ_T0072382.1 MGP_CBAJ_G0029447.1 mouse_genomes_project 5 108449016 108455293 - protein_coding retained_intron MGP_CBAJ_T0001851.1 MGP_CBAJ_G0001767.1 mouse_genomes_project 5 155077223 155078014 + TEC TEC MGP_CBAJ_T0007935.1 MGP_CBAJ_G0006472.1 mouse_genomes_project 5 1956353 1974099 - Gm42744 lincRNA lincRNA MGP_CBAJ_T0097822.1 MGP_CBAJ_G0036095.1 mouse_genomes_project 5 135341686 135342102 - pseudogene pseudogene MGP_CBAJ_T0075200.1 MGP_CBAJ_G0029982.1 mouse_genomes_project 5 159567347 159570140 + Wipi2 protein_coding retained_intron MGP_CBAJ_T0075201.1 MGP_CBAJ_G0029982.1 mouse_genomes_project 5 159569191 159613923 + MGP_CBAJ_P0075201 Wipi2 protein_coding protein_coding MGP_CBAJ_T0075202.1 MGP_CBAJ_G0029982.1 mouse_genomes_project 5 159569240 159606044 + Wipi2 protein_coding retained_intron MGP_CBAJ_T0075203.1 MGP_CBAJ_G0029982.1 mouse_genomes_project 5 159569242 159610822 + MGP_CBAJ_P0075203 Wipi2 protein_coding protein_coding MGP_CBAJ_T0075204.1 MGP_CBAJ_G0029982.1 mouse_genomes_project 5 159605848 159607979 + Wipi2 protein_coding retained_intron MGP_CBAJ_T0007972.1 MGP_CBAJ_G0006496.1 mouse_genomes_project 5 28488239 28505592 + Gm26894 lincRNA lincRNA MGP_CBAJ_T0070917.1 MGP_CBAJ_G0029156.1 mouse_genomes_project 5 37594109 37609746 - MGP_CBAJ_P0070917 Tada2b protein_coding protein_coding MGP_CBAJ_T0070918.1 MGP_CBAJ_G0029156.1 mouse_genomes_project 5 37598606 37606989 - MGP_CBAJ_P0070918 Tada2b protein_coding protein_coding MGP_CBAJ_T0098405.1 MGP_CBAJ_G0036671.1 mouse_genomes_project 5 35073129 35076936 - sense_intronic sense_intronic MGP_CBAJ_T0073722.1 MGP_CBAJ_G0029713.1 mouse_genomes_project 5 135978267 135990149 + MGP_CBAJ_P0073722 Gpn3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073723.1 MGP_CBAJ_G0029713.1 mouse_genomes_project 5 135978842 135990210 + MGP_CBAJ_P0073723 Gpn3 protein_coding protein_coding MGP_CBAJ_T0073724.1 MGP_CBAJ_G0029713.1 mouse_genomes_project 5 135978918 135986035 + Gpn3 protein_coding retained_intron MGP_CBAJ_T0073725.1 MGP_CBAJ_G0029713.1 mouse_genomes_project 5 135980376 135989607 + MGP_CBAJ_P0073725 Gpn3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073726.1 MGP_CBAJ_G0029713.1 mouse_genomes_project 5 135988575 135990210 + MGP_CBAJ_P0073726 Gpn3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073727.1 MGP_CBAJ_G0029713.1 mouse_genomes_project 5 135988600 135989840 + MGP_CBAJ_P0073727 Gpn3 protein_coding protein_coding MGP_CBAJ_T0014792.1 MGP_CBAJ_G0012904.1 mouse_genomes_project 5 70853639 70857073 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001518.1 MGP_CBAJ_G0001439.1 mouse_genomes_project 5 50613967 50615725 + TEC TEC MGP_CBAJ_T0074315.1 MGP_CBAJ_G0029812.1 mouse_genomes_project 5 145697071 145699033 - MGP_CBAJ_P0074315 unknown_likely_coding unknown_likely_coding MGP_CBAJ_T0073449.1 MGP_CBAJ_G0029657.1 mouse_genomes_project 5 130772734 130795259 + Hrk protein_coding processed_transcript MGP_CBAJ_T0073450.1 MGP_CBAJ_G0029657.1 mouse_genomes_project 5 130777836 130799892 + MGP_CBAJ_P0073450 Hrk protein_coding protein_coding MGP_CBAJ_T0014967.1 MGP_CBAJ_G0013079.1 mouse_genomes_project 5 160216298 160216680 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008202.1 MGP_CBAJ_G0006661.1 mouse_genomes_project 5 124267654 124275562 + Gm42865 lincRNA lincRNA MGP_CBAJ_T0075627.1 MGP_CBAJ_G0030078.1 mouse_genomes_project 5 167834043 167946470 + MGP_CBAJ_P0075627 Wdr95 protein_coding protein_coding MGP_CBAJ_T0075628.1 MGP_CBAJ_G0030078.1 mouse_genomes_project 5 167835049 167884627 + Wdr95 protein_coding retained_intron MGP_CBAJ_T0075629.1 MGP_CBAJ_G0030078.1 mouse_genomes_project 5 167835055 167934792 + MGP_CBAJ_P0075629 Wdr95 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075630.1 MGP_CBAJ_G0030078.1 mouse_genomes_project 5 167835097 167889924 + Wdr95 protein_coding retained_intron MGP_CBAJ_T0075631.1 MGP_CBAJ_G0030078.1 mouse_genomes_project 5 167835097 167946470 + MGP_CBAJ_P0075631 Wdr95 protein_coding protein_coding MGP_CBAJ_T0075632.1 MGP_CBAJ_G0030078.1 mouse_genomes_project 5 167841923 167884627 + Wdr95 protein_coding retained_intron MGP_CBAJ_T0075633.1 MGP_CBAJ_G0030078.1 mouse_genomes_project 5 167913255 167919684 + Wdr95 protein_coding retained_intron MGP_CBAJ_T0075109.1 MGP_CBAJ_G0029960.1 mouse_genomes_project 5 156382564 156385816 - MGP_CBAJ_P0075109 Psmg3 protein_coding protein_coding MGP_CBAJ_T0075110.1 MGP_CBAJ_G0029960.1 mouse_genomes_project 5 156382585 156385774 - MGP_CBAJ_P0075110 Psmg3 protein_coding protein_coding MGP_CBAJ_T0075111.1 MGP_CBAJ_G0029960.1 mouse_genomes_project 5 156383405 156385806 - Psmg3 protein_coding retained_intron MGP_CBAJ_T0069842.1 MGP_CBAJ_G0028971.1 mouse_genomes_project 5 17054134 17159112 - MGP_CBAJ_P0069842 Gnai1 protein_coding protein_coding MGP_CBAJ_T0014740.1 MGP_CBAJ_G0012852.1 mouse_genomes_project 5 45812273 45812853 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0071594.1 MGP_CBAJ_G0029267.1 mouse_genomes_project 5 72760935 72781649 - MGP_CBAJ_P0071594 Gm21905 protein_coding protein_coding MGP_CBAJ_T0070604.1 MGP_CBAJ_G0029107.1 mouse_genomes_project 5 33724600 33726781 + protein_coding retained_intron MGP_CBAJ_T0071693.1 MGP_CBAJ_G0029289.1 mouse_genomes_project 5 78435907 78533481 - Fryl protein_coding retained_intron MGP_CBAJ_T0071694.1 MGP_CBAJ_G0029289.1 mouse_genomes_project 5 78435907 78620251 - MGP_CBAJ_P0071694 Fryl protein_coding protein_coding MGP_CBAJ_T0071695.1 MGP_CBAJ_G0029289.1 mouse_genomes_project 5 78436651 78624238 - MGP_CBAJ_P0071695 Fryl protein_coding protein_coding MGP_CBAJ_T0071698.1 MGP_CBAJ_G0029289.1 mouse_genomes_project 5 78481495 78552364 - MGP_CBAJ_P0071698 Fryl protein_coding protein_coding MGP_CBAJ_T0071699.1 MGP_CBAJ_G0029289.1 mouse_genomes_project 5 78490242 78493236 - Fryl protein_coding retained_intron MGP_CBAJ_T0071700.1 MGP_CBAJ_G0029289.1 mouse_genomes_project 5 78490345 78547236 - Fryl protein_coding processed_transcript MGP_CBAJ_T0071701.1 MGP_CBAJ_G0029289.1 mouse_genomes_project 5 78498677 78499608 - Fryl protein_coding retained_intron MGP_CBAJ_T0071702.1 MGP_CBAJ_G0029289.1 mouse_genomes_project 5 78521569 78522449 - Fryl protein_coding retained_intron MGP_CBAJ_T0071703.1 MGP_CBAJ_G0029289.1 mouse_genomes_project 5 78522639 78533203 - MGP_CBAJ_P0071703 Fryl protein_coding protein_coding MGP_CBAJ_T0071704.1 MGP_CBAJ_G0029289.1 mouse_genomes_project 5 78534807 78537922 - Fryl protein_coding retained_intron MGP_CBAJ_T0071705.1 MGP_CBAJ_G0029289.1 mouse_genomes_project 5 78561692 78562686 - MGP_CBAJ_P0071705 Fryl protein_coding protein_coding MGP_CBAJ_T0071706.1 MGP_CBAJ_G0029289.1 mouse_genomes_project 5 78563820 78643143 - Fryl protein_coding retained_intron MGP_CBAJ_T0071707.1 MGP_CBAJ_G0029289.1 mouse_genomes_project 5 78572812 78584101 - MGP_CBAJ_P0071707 Fryl protein_coding protein_coding MGP_CBAJ_T0071708.1 MGP_CBAJ_G0029289.1 mouse_genomes_project 5 78582600 78586497 - MGP_CBAJ_P0071708 Fryl protein_coding protein_coding MGP_CBAJ_T0071709.1 MGP_CBAJ_G0029289.1 mouse_genomes_project 5 78583511 78745829 - Fryl protein_coding retained_intron MGP_CBAJ_T0071710.1 MGP_CBAJ_G0029289.1 mouse_genomes_project 5 78620152 78671920 - MGP_CBAJ_P0071710 Fryl protein_coding protein_coding MGP_CBAJ_T0071711.1 MGP_CBAJ_G0029289.1 mouse_genomes_project 5 78673868 78745993 - Fryl protein_coding retained_intron MGP_CBAJ_T0004570.1 MGP_CBAJ_G0003956.1 mouse_genomes_project 5 30810146 30824422 + Gm42765 antisense antisense MGP_CBAJ_T0004571.1 MGP_CBAJ_G0003956.1 mouse_genomes_project 5 30810189 30828298 + Gm42765 antisense antisense MGP_CBAJ_T0070115.1 MGP_CBAJ_G0029023.1 mouse_genomes_project 5 24967518 24971531 + Galnt11 protein_coding processed_transcript MGP_CBAJ_T0070117.1 MGP_CBAJ_G0029023.1 mouse_genomes_project 5 24968493 25001695 + MGP_CBAJ_P0070117 Galnt11 protein_coding protein_coding MGP_CBAJ_T0070118.1 MGP_CBAJ_G0029023.1 mouse_genomes_project 5 24982321 25001694 + MGP_CBAJ_P0070118 Galnt11 protein_coding protein_coding MGP_CBAJ_T0070119.1 MGP_CBAJ_G0029023.1 mouse_genomes_project 5 24982731 24984710 + MGP_CBAJ_P0070119 Galnt11 protein_coding protein_coding MGP_CBAJ_T0070120.1 MGP_CBAJ_G0029023.1 mouse_genomes_project 5 24983311 25001695 + MGP_CBAJ_P0070120 Galnt11 protein_coding protein_coding MGP_CBAJ_T0075523.1 MGP_CBAJ_G0030060.1 mouse_genomes_project 5 165121435 165127316 + MGP_CBAJ_P0075523 Pdx1 protein_coding protein_coding MGP_CBAJ_T0008156.1 MGP_CBAJ_G0006636.1 mouse_genomes_project 5 118030621 118068600 - Gm26692 lincRNA lincRNA MGP_CBAJ_T0008044.1 MGP_CBAJ_G0006551.1 mouse_genomes_project 5 68849031 68862168 - 1700027F09Rik lincRNA lincRNA MGP_CBAJ_T0004779.1 MGP_CBAJ_G0004109.1 mouse_genomes_project 5 151686339 151687044 - Gm43604 antisense antisense MGP_CBAJ_T0001415.1 MGP_CBAJ_G0001339.1 mouse_genomes_project 5 11848515 11850714 + TEC TEC MGP_CBAJ_T0017893.1 MGP_CBAJ_G0015342.1 mouse_genomes_project 5 69098725 69225759 - Gm20033 processed_transcript antisense MGP_CBAJ_T0017894.1 MGP_CBAJ_G0015342.1 mouse_genomes_project 5 69098729 69099498 - Gm20033 processed_transcript retained_intron MGP_CBAJ_T0017895.1 MGP_CBAJ_G0015342.1 mouse_genomes_project 5 69098841 69111039 - Gm20033 processed_transcript retained_intron MGP_CBAJ_T0017896.1 MGP_CBAJ_G0015342.1 mouse_genomes_project 5 69100325 69123206 - Gm20033 processed_transcript processed_transcript MGP_CBAJ_T0017897.1 MGP_CBAJ_G0015342.1 mouse_genomes_project 5 69224045 69225477 - Gm20033 processed_transcript retained_intron MGP_CBAJ_T0017898.1 MGP_CBAJ_G0015342.1 mouse_genomes_project 5 69224141 69225758 - Gm20033 processed_transcript antisense MGP_CBAJ_T0001645.1 MGP_CBAJ_G0001564.1 mouse_genomes_project 5 78322079 78324435 - TEC TEC MGP_CBAJ_T0001646.1 MGP_CBAJ_G0001564.1 mouse_genomes_project 5 78323788 78324435 - TEC pseudogene MGP_CBAJ_T0014836.1 MGP_CBAJ_G0012948.1 mouse_genomes_project 5 95639478 95641336 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014631.1 MGP_CBAJ_G0012743.1 mouse_genomes_project 5 3760867 3761222 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008248.1 MGP_CBAJ_G0006696.1 mouse_genomes_project 5 136874559 136878944 - AI480526 lincRNA lincRNA MGP_CBAJ_T0008250.1 MGP_CBAJ_G0006696.1 mouse_genomes_project 5 136875125 136880183 - AI480526 lincRNA lincRNA MGP_CBAJ_T0008251.1 MGP_CBAJ_G0006696.1 mouse_genomes_project 5 136875296 136885135 - AI480526 lincRNA lincRNA MGP_CBAJ_T0008252.1 MGP_CBAJ_G0006696.1 mouse_genomes_project 5 136875676 136885725 - AI480526 lincRNA lincRNA MGP_CBAJ_T0008254.1 MGP_CBAJ_G0006696.1 mouse_genomes_project 5 136877060 136885148 - AI480526 lincRNA lincRNA MGP_CBAJ_T0008255.1 MGP_CBAJ_G0006696.1 mouse_genomes_project 5 136878305 136881125 - AI480526 lincRNA lincRNA MGP_CBAJ_T0008256.1 MGP_CBAJ_G0006696.1 mouse_genomes_project 5 136878877 136885126 - AI480526 lincRNA lincRNA MGP_CBAJ_T0004611.1 MGP_CBAJ_G0003987.1 mouse_genomes_project 5 55186550 55191410 + antisense antisense MGP_CBAJ_T0075684.1 MGP_CBAJ_G0030085.1 mouse_genomes_project 5 169064166 169089101 - MGP_CBAJ_P0075684 N4bp2l1 protein_coding protein_coding MGP_CBAJ_T0075685.1 MGP_CBAJ_G0030085.1 mouse_genomes_project 5 169064169 169069514 - MGP_CBAJ_P0075685 N4bp2l1 protein_coding protein_coding MGP_CBAJ_T0075686.1 MGP_CBAJ_G0030085.1 mouse_genomes_project 5 169065187 169089038 - MGP_CBAJ_P0075686 N4bp2l1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075687.1 MGP_CBAJ_G0030085.1 mouse_genomes_project 5 169066522 169091764 - MGP_CBAJ_P0075687 N4bp2l1 protein_coding protein_coding MGP_CBAJ_T0075688.1 MGP_CBAJ_G0030085.1 mouse_genomes_project 5 169086327 169089104 - MGP_CBAJ_P0075688 N4bp2l1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075689.1 MGP_CBAJ_G0030085.1 mouse_genomes_project 5 169086330 169089076 - MGP_CBAJ_P0075689 N4bp2l1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075690.1 MGP_CBAJ_G0030085.1 mouse_genomes_project 5 169087018 169088345 - N4bp2l1 protein_coding retained_intron MGP_CBAJ_T0099381.1 MGP_CBAJ_G0037636.1 mouse_genomes_project 5 114965274 114965381 + Gm24097 snRNA snRNA MGP_CBAJ_T0072812.1 MGP_CBAJ_G0029537.1 mouse_genomes_project 5 119909219 119942045 - MGP_CBAJ_P0072812 Vmn2r13 protein_coding protein_coding MGP_CBAJ_T0071731.1 MGP_CBAJ_G0029295.1 mouse_genomes_project 5 79016261 79105888 + MGP_CBAJ_P0071731 Dcun1d4 protein_coding protein_coding MGP_CBAJ_T0071732.1 MGP_CBAJ_G0029295.1 mouse_genomes_project 5 79023467 79102375 + Dcun1d4 protein_coding processed_transcript MGP_CBAJ_T0071733.1 MGP_CBAJ_G0029295.1 mouse_genomes_project 5 79030032 79105888 + MGP_CBAJ_P0071733 Dcun1d4 protein_coding protein_coding MGP_CBAJ_T0071734.1 MGP_CBAJ_G0029295.1 mouse_genomes_project 5 79030074 79086465 + MGP_CBAJ_P0071734 Dcun1d4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071735.1 MGP_CBAJ_G0029295.1 mouse_genomes_project 5 79030130 79073828 + MGP_CBAJ_P0071735 Dcun1d4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071736.1 MGP_CBAJ_G0029295.1 mouse_genomes_project 5 79030174 79105881 + MGP_CBAJ_P0071736 Dcun1d4 protein_coding protein_coding MGP_CBAJ_T0071737.1 MGP_CBAJ_G0029295.1 mouse_genomes_project 5 79033330 79061854 + Dcun1d4 protein_coding processed_transcript MGP_CBAJ_T0071738.1 MGP_CBAJ_G0029295.1 mouse_genomes_project 5 79050838 79077042 + MGP_CBAJ_P0071738 Dcun1d4 protein_coding protein_coding MGP_CBAJ_T0074386.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149583587 149652412 - MGP_CBAJ_P0074386 Gtf2ird1 protein_coding protein_coding MGP_CBAJ_T0074387.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149583589 149705026 - MGP_CBAJ_P0074387 Gtf2ird1 protein_coding protein_coding MGP_CBAJ_T0074388.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149583589 149704566 - MGP_CBAJ_P0074388 Gtf2ird1 protein_coding protein_coding MGP_CBAJ_T0074389.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149583594 149704998 - MGP_CBAJ_P0074389 Gtf2ird1 protein_coding protein_coding MGP_CBAJ_T0074390.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149583596 149593347 - MGP_CBAJ_P0074390 Gtf2ird1 protein_coding protein_coding MGP_CBAJ_T0074391.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149583602 149705026 - MGP_CBAJ_P0074391 Gtf2ird1 protein_coding protein_coding MGP_CBAJ_T0074392.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149583612 149704886 - MGP_CBAJ_P0074392 Gtf2ird1 protein_coding protein_coding MGP_CBAJ_T0074393.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149583612 149704894 - MGP_CBAJ_P0074393 Gtf2ird1 protein_coding protein_coding MGP_CBAJ_T0074394.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149583612 149704886 - MGP_CBAJ_P0074394 Gtf2ird1 protein_coding protein_coding MGP_CBAJ_T0074395.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149583630 149704899 - MGP_CBAJ_P0074395 Gtf2ird1 protein_coding protein_coding MGP_CBAJ_T0074396.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149583719 149607244 - MGP_CBAJ_P0074396 Gtf2ird1 protein_coding protein_coding MGP_CBAJ_T0074397.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149584506 149704899 - MGP_CBAJ_P0074397 Gtf2ird1 protein_coding protein_coding MGP_CBAJ_T0074398.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149584568 149705002 - MGP_CBAJ_P0074398 Gtf2ird1 protein_coding protein_coding MGP_CBAJ_T0074399.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149584587 149704896 - MGP_CBAJ_P0074399 Gtf2ird1 protein_coding protein_coding MGP_CBAJ_T0074400.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149586108 149591021 - Gtf2ird1 protein_coding retained_intron MGP_CBAJ_T0074401.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149586171 149615162 - MGP_CBAJ_P0074401 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074402.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149591708 149618569 - MGP_CBAJ_P0074402 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074403.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149593404 149618548 - MGP_CBAJ_P0074403 Gtf2ird1 protein_coding protein_coding MGP_CBAJ_T0074404.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149605693 149704587 - Gtf2ird1 protein_coding retained_intron MGP_CBAJ_T0074405.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149612673 149625688 - MGP_CBAJ_P0074405 Gtf2ird1 protein_coding protein_coding MGP_CBAJ_T0074406.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149612673 149625688 - MGP_CBAJ_P0074406 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074407.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149612882 149614593 - Gtf2ird1 protein_coding retained_intron MGP_CBAJ_T0074408.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149612885 149625688 - MGP_CBAJ_P0074408 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074409.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149613869 149625688 - MGP_CBAJ_P0074409 Gtf2ird1 protein_coding protein_coding MGP_CBAJ_T0074410.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149614910 149625592 - Gtf2ird1 protein_coding retained_intron MGP_CBAJ_T0074411.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149615026 149632073 - Gtf2ird1 protein_coding retained_intron MGP_CBAJ_T0074412.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149620945 149650505 - MGP_CBAJ_P0074412 Gtf2ird1 protein_coding protein_coding MGP_CBAJ_T0074413.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149632787 149704989 - Gtf2ird1 protein_coding retained_intron MGP_CBAJ_T0074414.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149634680 149704984 - Gtf2ird1 protein_coding processed_transcript MGP_CBAJ_T0074415.1 MGP_CBAJ_G0029820.1 mouse_genomes_project 5 149640961 149704266 - MGP_CBAJ_P0074415 Gtf2ird1 protein_coding protein_coding MGP_CBAJ_T0011482.1 MGP_CBAJ_G0009620.1 mouse_genomes_project 5 123763801 123763936 - Gm27357 misc_RNA misc_RNA MGP_CBAJ_T0001852.1 MGP_CBAJ_G0001768.1 mouse_genomes_project 5 156645135 156647681 - TEC TEC MGP_CBAJ_T0014925.1 MGP_CBAJ_G0013037.1 mouse_genomes_project 5 135844718 135845257 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007954.1 MGP_CBAJ_G0006486.1 mouse_genomes_project 5 22825669 22827162 + 4930580E04Rik lincRNA lincRNA MGP_CBAJ_T0074491.1 MGP_CBAJ_G0029836.1 mouse_genomes_project 5 150449027 150450683 + MGP_CBAJ_P0074491 Dnajc30 protein_coding protein_coding MGP_CBAJ_T0014727.1 MGP_CBAJ_G0012839.1 mouse_genomes_project 5 36980335 36980634 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0071846.1 MGP_CBAJ_G0029316.1 mouse_genomes_project 5 82556794 82558643 + MGP_CBAJ_P0071846 C530008M17Rik protein_coding protein_coding MGP_CBAJ_T0071847.1 MGP_CBAJ_G0029316.1 mouse_genomes_project 5 82557970 82773934 + MGP_CBAJ_P0071847 C530008M17Rik protein_coding protein_coding MGP_CBAJ_T0071848.1 MGP_CBAJ_G0029316.1 mouse_genomes_project 5 82557972 82559396 + C530008M17Rik protein_coding processed_transcript MGP_CBAJ_T0071849.1 MGP_CBAJ_G0029316.1 mouse_genomes_project 5 82558008 82708053 + C530008M17Rik protein_coding processed_transcript MGP_CBAJ_T0071850.1 MGP_CBAJ_G0029316.1 mouse_genomes_project 5 82667034 82813274 + MGP_CBAJ_P0071850 C530008M17Rik protein_coding protein_coding MGP_CBAJ_T0071851.1 MGP_CBAJ_G0029316.1 mouse_genomes_project 5 82732577 82775642 + MGP_CBAJ_P0071851 C530008M17Rik protein_coding protein_coding MGP_CBAJ_T0071852.1 MGP_CBAJ_G0029316.1 mouse_genomes_project 5 82773651 82813489 + MGP_CBAJ_P0071852 C530008M17Rik protein_coding protein_coding MGP_CBAJ_T0071853.1 MGP_CBAJ_G0029316.1 mouse_genomes_project 5 82773651 82813498 + MGP_CBAJ_P0071853 C530008M17Rik protein_coding protein_coding MGP_CBAJ_T0071854.1 MGP_CBAJ_G0029316.1 mouse_genomes_project 5 82773671 82775644 + MGP_CBAJ_P0071854 C530008M17Rik protein_coding protein_coding MGP_CBAJ_T0071855.1 MGP_CBAJ_G0029316.1 mouse_genomes_project 5 82791873 82806419 + C530008M17Rik protein_coding retained_intron MGP_CBAJ_T0071856.1 MGP_CBAJ_G0029316.1 mouse_genomes_project 5 82806021 82808349 + MGP_CBAJ_P0071856 C530008M17Rik protein_coding protein_coding MGP_CBAJ_T0071857.1 MGP_CBAJ_G0029316.1 mouse_genomes_project 5 82809116 82810619 + C530008M17Rik protein_coding processed_transcript MGP_CBAJ_T0014841.1 MGP_CBAJ_G0012953.1 mouse_genomes_project 5 96288064 96288176 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014696.1 MGP_CBAJ_G0012808.1 mouse_genomes_project 5 26463046 26463158 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0075719.1 MGP_CBAJ_G0030091.1 mouse_genomes_project 5 170140582 170168085 - MGP_CBAJ_P0075719 Vmn2r18 protein_coding protein_coding MGP_CBAJ_T0070561.1 MGP_CBAJ_G0029100.1 mouse_genomes_project 5 32787627 32897887 + Plb1 protein_coding retained_intron MGP_CBAJ_T0070562.1 MGP_CBAJ_G0029100.1 mouse_genomes_project 5 32787629 32790525 + Plb1 protein_coding retained_intron MGP_CBAJ_T0070563.1 MGP_CBAJ_G0029100.1 mouse_genomes_project 5 32787629 32804926 + Plb1 protein_coding processed_transcript MGP_CBAJ_T0070564.1 MGP_CBAJ_G0029100.1 mouse_genomes_project 5 32787633 32941179 + MGP_CBAJ_P0070564 Plb1 protein_coding protein_coding MGP_CBAJ_T0070565.1 MGP_CBAJ_G0029100.1 mouse_genomes_project 5 32787667 32858056 + Plb1 protein_coding retained_intron MGP_CBAJ_T0070566.1 MGP_CBAJ_G0029100.1 mouse_genomes_project 5 32793864 32889870 + MGP_CBAJ_P0070566 Plb1 protein_coding protein_coding MGP_CBAJ_T0070567.1 MGP_CBAJ_G0029100.1 mouse_genomes_project 5 32802135 32941181 + MGP_CBAJ_P0070567 Plb1 protein_coding protein_coding MGP_CBAJ_T0070568.1 MGP_CBAJ_G0029100.1 mouse_genomes_project 5 32923191 32943345 + Plb1 protein_coding processed_transcript MGP_CBAJ_T0070569.1 MGP_CBAJ_G0029100.1 mouse_genomes_project 5 32924316 32941174 + Plb1 protein_coding processed_transcript MGP_CBAJ_T0073203.1 MGP_CBAJ_G0029610.1 mouse_genomes_project 5 126779752 126800364 - MGP_CBAJ_P0073203 Gm20499 protein_coding protein_coding MGP_CBAJ_T0004782.1 MGP_CBAJ_G0004112.1 mouse_genomes_project 5 153521863 153524261 + Gm36266 antisense antisense MGP_CBAJ_T0001777.1 MGP_CBAJ_G0001695.1 mouse_genomes_project 5 136763871 136766701 + TEC TEC MGP_CBAJ_T0071650.1 MGP_CBAJ_G0029281.1 mouse_genomes_project 5 77853086 77897594 - MGP_CBAJ_P0071650 Nfxl1 protein_coding protein_coding MGP_CBAJ_T0071651.1 MGP_CBAJ_G0029281.1 mouse_genomes_project 5 77853089 77897555 - MGP_CBAJ_P0071651 Nfxl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071652.1 MGP_CBAJ_G0029281.1 mouse_genomes_project 5 77853300 77857628 - Nfxl1 protein_coding retained_intron MGP_CBAJ_T0071653.1 MGP_CBAJ_G0029281.1 mouse_genomes_project 5 77857183 77864688 - Nfxl1 protein_coding retained_intron MGP_CBAJ_T0071654.1 MGP_CBAJ_G0029281.1 mouse_genomes_project 5 77864228 77867150 - Nfxl1 protein_coding retained_intron MGP_CBAJ_T0071655.1 MGP_CBAJ_G0029281.1 mouse_genomes_project 5 77884434 77897509 - MGP_CBAJ_P0071655 Nfxl1 protein_coding protein_coding MGP_CBAJ_T0071656.1 MGP_CBAJ_G0029281.1 mouse_genomes_project 5 77888151 77897322 - Nfxl1 protein_coding retained_intron MGP_CBAJ_T0071657.1 MGP_CBAJ_G0029281.1 mouse_genomes_project 5 77888153 77897558 - Nfxl1 protein_coding retained_intron MGP_CBAJ_T0071658.1 MGP_CBAJ_G0029281.1 mouse_genomes_project 5 77893381 77897533 - Nfxl1 protein_coding retained_intron MGP_CBAJ_T0001633.1 MGP_CBAJ_G0001552.1 mouse_genomes_project 5 73957902 73961646 - TEC TEC MGP_CBAJ_T0007974.1 MGP_CBAJ_G0006498.1 mouse_genomes_project 5 30091449 30096931 - Gm42450 lincRNA lincRNA MGP_CBAJ_T0014676.1 MGP_CBAJ_G0012788.1 mouse_genomes_project 5 22058274 22058647 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0071900.1 MGP_CBAJ_G0029324.1 mouse_genomes_project 5 83204821 83214934 - MGP_CBAJ_P0071900 Spink2 protein_coding protein_coding MGP_CBAJ_T0071901.1 MGP_CBAJ_G0029324.1 mouse_genomes_project 5 83204821 83214901 - MGP_CBAJ_P0071901 Spink2 protein_coding protein_coding MGP_CBAJ_T0071902.1 MGP_CBAJ_G0029324.1 mouse_genomes_project 5 83204826 83214668 - MGP_CBAJ_P0071902 Spink2 protein_coding protein_coding MGP_CBAJ_T0007991.1 MGP_CBAJ_G0006510.1 mouse_genomes_project 5 37565261 37585337 - 2210406O10Rik lincRNA lincRNA MGP_CBAJ_T0007992.1 MGP_CBAJ_G0006510.1 mouse_genomes_project 5 37575161 37585328 - 2210406O10Rik lincRNA lincRNA MGP_CBAJ_T0007993.1 MGP_CBAJ_G0006510.1 mouse_genomes_project 5 37576004 37585327 - 2210406O10Rik lincRNA lincRNA MGP_CBAJ_T0007994.1 MGP_CBAJ_G0006510.1 mouse_genomes_project 5 37578575 37585369 - 2210406O10Rik lincRNA lincRNA MGP_CBAJ_T0072628.1 MGP_CBAJ_G0029498.1 mouse_genomes_project 5 117108938 117179821 - MGP_CBAJ_P0072628 Hfm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072629.1 MGP_CBAJ_G0029498.1 mouse_genomes_project 5 117108940 117211925 - MGP_CBAJ_P0072629 Hfm1 protein_coding protein_coding MGP_CBAJ_T0072630.1 MGP_CBAJ_G0029498.1 mouse_genomes_project 5 117108943 117211554 - MGP_CBAJ_P0072630 Hfm1 protein_coding protein_coding MGP_CBAJ_T0072631.1 MGP_CBAJ_G0029498.1 mouse_genomes_project 5 117109405 117157589 - MGP_CBAJ_P0072631 Hfm1 protein_coding unknown_likely_coding MGP_CBAJ_T0072632.1 MGP_CBAJ_G0029498.1 mouse_genomes_project 5 117110310 117172110 - MGP_CBAJ_P0072632 Hfm1 protein_coding protein_coding MGP_CBAJ_T0072633.1 MGP_CBAJ_G0029498.1 mouse_genomes_project 5 117188305 117211834 - Hfm1 protein_coding retained_intron MGP_CBAJ_T0072634.1 MGP_CBAJ_G0029498.1 mouse_genomes_project 5 117188305 117211554 - MGP_CBAJ_P0072634 Hfm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072635.1 MGP_CBAJ_G0029498.1 mouse_genomes_project 5 117188499 117211516 - MGP_CBAJ_P0072635 Hfm1 protein_coding protein_coding MGP_CBAJ_T0069945.1 MGP_CBAJ_G0028991.1 mouse_genomes_project 5 22093278 22683566 + MGP_CBAJ_P0069945 Lhfpl3 protein_coding protein_coding MGP_CBAJ_T0069947.1 MGP_CBAJ_G0028991.1 mouse_genomes_project 5 22485995 22683556 + MGP_CBAJ_P0069947 Lhfpl3 protein_coding protein_coding MGP_CBAJ_T0074504.1 MGP_CBAJ_G0029839.1 mouse_genomes_project 5 150554033 150570076 + MGP_CBAJ_P0074504 Tbl2 protein_coding protein_coding MGP_CBAJ_T0074505.1 MGP_CBAJ_G0029839.1 mouse_genomes_project 5 150554062 150564145 + MGP_CBAJ_P0074505 Tbl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074506.1 MGP_CBAJ_G0029839.1 mouse_genomes_project 5 150554062 150561932 + MGP_CBAJ_P0074506 Tbl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074507.1 MGP_CBAJ_G0029839.1 mouse_genomes_project 5 150554067 150558780 + MGP_CBAJ_P0074507 Tbl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074508.1 MGP_CBAJ_G0029839.1 mouse_genomes_project 5 150557095 150561970 + MGP_CBAJ_P0074508 Tbl2 protein_coding protein_coding MGP_CBAJ_T0014927.1 MGP_CBAJ_G0013039.1 mouse_genomes_project 5 136052462 136052782 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014830.1 MGP_CBAJ_G0012942.1 mouse_genomes_project 5 94433136 94434196 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100630.1 MGP_CBAJ_G0038885.1 mouse_genomes_project 5 109397176 109397259 - Gm26363 snoRNA snoRNA MGP_CBAJ_T0073542.1 MGP_CBAJ_G0029680.1 mouse_genomes_project 5 133985584 133996018 + MGP_CBAJ_P0073542 Oas1f protein_coding protein_coding MGP_CBAJ_T0073543.1 MGP_CBAJ_G0029680.1 mouse_genomes_project 5 133986587 133996018 + MGP_CBAJ_P0073543 Oas1f protein_coding nonsense_mediated_decay MGP_CBAJ_T0074455.1 MGP_CBAJ_G0029830.1 mouse_genomes_project 5 150285533 150295916 + MGP_CBAJ_P0074455 Wbscr27 protein_coding protein_coding MGP_CBAJ_T0074456.1 MGP_CBAJ_G0029830.1 mouse_genomes_project 5 150285538 150295002 + MGP_CBAJ_P0074456 Wbscr27 protein_coding protein_coding MGP_CBAJ_T0074457.1 MGP_CBAJ_G0029830.1 mouse_genomes_project 5 150285538 150295002 + MGP_CBAJ_P0074457 Wbscr27 protein_coding protein_coding MGP_CBAJ_T0074458.1 MGP_CBAJ_G0029830.1 mouse_genomes_project 5 150285550 150295002 + MGP_CBAJ_P0074458 Wbscr27 protein_coding protein_coding MGP_CBAJ_T0074459.1 MGP_CBAJ_G0029830.1 mouse_genomes_project 5 150285557 150294481 + MGP_CBAJ_P0074459 Wbscr27 protein_coding protein_coding MGP_CBAJ_T0074460.1 MGP_CBAJ_G0029830.1 mouse_genomes_project 5 150285571 150287590 + MGP_CBAJ_P0074460 Wbscr27 protein_coding protein_coding MGP_CBAJ_T0074461.1 MGP_CBAJ_G0029830.1 mouse_genomes_project 5 150285949 150290440 + Wbscr27 protein_coding processed_transcript MGP_CBAJ_T0014950.1 MGP_CBAJ_G0013062.1 mouse_genomes_project 5 153871251 153872003 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0069819.1 MGP_CBAJ_G0028962.1 mouse_genomes_project 5 15098323 15122258 + Hgf protein_coding retained_intron MGP_CBAJ_T0069820.1 MGP_CBAJ_G0028962.1 mouse_genomes_project 5 15098378 15174944 + MGP_CBAJ_P0069820 Hgf protein_coding protein_coding MGP_CBAJ_T0069821.1 MGP_CBAJ_G0028962.1 mouse_genomes_project 5 15098407 15117847 + Hgf protein_coding retained_intron MGP_CBAJ_T0069822.1 MGP_CBAJ_G0028962.1 mouse_genomes_project 5 15098576 15118420 + Hgf protein_coding retained_intron MGP_CBAJ_T0069823.1 MGP_CBAJ_G0028962.1 mouse_genomes_project 5 15098611 15174130 + MGP_CBAJ_P0069823 Hgf protein_coding protein_coding MGP_CBAJ_T0069824.1 MGP_CBAJ_G0028962.1 mouse_genomes_project 5 15098753 15173834 + MGP_CBAJ_P0069824 Hgf protein_coding protein_coding MGP_CBAJ_T0004578.1 MGP_CBAJ_G0003962.1 mouse_genomes_project 5 33096885 33182107 - antisense antisense MGP_CBAJ_T0014675.1 MGP_CBAJ_G0012787.1 mouse_genomes_project 5 21999841 22001450 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001718.1 MGP_CBAJ_G0001636.1 mouse_genomes_project 5 122407598 122408332 + TEC TEC MGP_CBAJ_T0008260.1 MGP_CBAJ_G0006701.1 mouse_genomes_project 5 137974919 138007031 - lincRNA lincRNA MGP_CBAJ_T0014769.1 MGP_CBAJ_G0012881.1 mouse_genomes_project 5 62732717 62733671 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001809.1 MGP_CBAJ_G0001726.1 mouse_genomes_project 5 145746442 145748543 - TEC TEC MGP_CBAJ_T0004691.1 MGP_CBAJ_G0004047.1 mouse_genomes_project 5 121766158 121768116 + Gm42596 antisense antisense MGP_CBAJ_T0014986.1 MGP_CBAJ_G0013098.1 mouse_genomes_project 5 165206963 165207429 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001854.1 MGP_CBAJ_G0001770.1 mouse_genomes_project 5 156956787 156958997 - TEC TEC MGP_CBAJ_T0008314.1 MGP_CBAJ_G0006734.1 mouse_genomes_project 5 153390397 153391353 + 9130604C24Rik lincRNA lincRNA MGP_CBAJ_T0001571.1 MGP_CBAJ_G0001491.1 mouse_genomes_project 5 61490444 61493157 + TEC TEC MGP_CBAJ_T0008025.1 MGP_CBAJ_G0006533.1 mouse_genomes_project 5 52656484 52661128 + 4930448I18Rik lincRNA lincRNA MGP_CBAJ_T0073103.1 MGP_CBAJ_G0029593.1 mouse_genomes_project 5 125885581 125915293 + Usp30 protein_coding processed_transcript MGP_CBAJ_T0073104.1 MGP_CBAJ_G0029593.1 mouse_genomes_project 5 125885634 125934616 + MGP_CBAJ_P0073104 Usp30 protein_coding protein_coding MGP_CBAJ_T0073105.1 MGP_CBAJ_G0029593.1 mouse_genomes_project 5 125885870 125912786 + Usp30 protein_coding processed_transcript MGP_CBAJ_T0073106.1 MGP_CBAJ_G0029593.1 mouse_genomes_project 5 125929080 125953524 + MGP_CBAJ_P0073106 Usp30 protein_coding protein_coding MGP_CBAJ_T0073107.1 MGP_CBAJ_G0029593.1 mouse_genomes_project 5 125929125 125949901 + MGP_CBAJ_P0073107 Usp30 protein_coding protein_coding MGP_CBAJ_T0073108.1 MGP_CBAJ_G0029593.1 mouse_genomes_project 5 125932477 125941085 + Usp30 protein_coding retained_intron MGP_CBAJ_T0073109.1 MGP_CBAJ_G0029593.1 mouse_genomes_project 5 125939894 125940414 + Usp30 protein_coding retained_intron MGP_CBAJ_T0073168.1 MGP_CBAJ_G0029605.1 mouse_genomes_project 5 126618834 126639257 - MGP_CBAJ_P0073168 Gltp protein_coding protein_coding MGP_CBAJ_T0073169.1 MGP_CBAJ_G0029605.1 mouse_genomes_project 5 126619519 126639214 - MGP_CBAJ_P0073169 Gltp protein_coding protein_coding MGP_CBAJ_T0073170.1 MGP_CBAJ_G0029605.1 mouse_genomes_project 5 126619664 126639181 - MGP_CBAJ_P0073170 Gltp protein_coding protein_coding MGP_CBAJ_T0100639.1 MGP_CBAJ_G0038894.1 mouse_genomes_project 5 144454019 144454154 + Gm23245 snoRNA snoRNA MGP_CBAJ_T0008268.1 MGP_CBAJ_G0006707.1 mouse_genomes_project 5 140140171 140164870 + Gm42952 lincRNA lincRNA MGP_CBAJ_T0008269.1 MGP_CBAJ_G0006707.1 mouse_genomes_project 5 140143798 140165071 + Gm42952 lincRNA lincRNA MGP_CBAJ_T0008270.1 MGP_CBAJ_G0006707.1 mouse_genomes_project 5 140143810 140158462 + Gm42952 lincRNA lincRNA MGP_CBAJ_T0008271.1 MGP_CBAJ_G0006707.1 mouse_genomes_project 5 140143815 140157117 + Gm42952 lincRNA lincRNA MGP_CBAJ_T0008272.1 MGP_CBAJ_G0006707.1 mouse_genomes_project 5 140143820 140165014 + Gm42952 lincRNA lincRNA MGP_CBAJ_T0008273.1 MGP_CBAJ_G0006707.1 mouse_genomes_project 5 140143834 140158093 + Gm42952 lincRNA lincRNA MGP_CBAJ_T0070876.1 MGP_CBAJ_G0029149.1 mouse_genomes_project 5 36699091 36732128 - MGP_CBAJ_P0070876 Htra3 protein_coding protein_coding MGP_CBAJ_T0070877.1 MGP_CBAJ_G0029149.1 mouse_genomes_project 5 36699151 36731845 - MGP_CBAJ_P0070877 Htra3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070878.1 MGP_CBAJ_G0029149.1 mouse_genomes_project 5 36711345 36732223 - MGP_CBAJ_P0070878 Htra3 protein_coding protein_coding MGP_CBAJ_T0070879.1 MGP_CBAJ_G0029149.1 mouse_genomes_project 5 36717985 36721347 - MGP_CBAJ_P0070879 Htra3 protein_coding protein_coding MGP_CBAJ_T0070880.1 MGP_CBAJ_G0029149.1 mouse_genomes_project 5 36731133 36732213 - Htra3 protein_coding retained_intron MGP_CBAJ_T0074852.1 MGP_CBAJ_G0029904.1 mouse_genomes_project 5 153566200 153612281 - MGP_CBAJ_P0074852 Agfg2 protein_coding protein_coding MGP_CBAJ_T0074853.1 MGP_CBAJ_G0029904.1 mouse_genomes_project 5 153573451 153612235 - MGP_CBAJ_P0074853 Agfg2 protein_coding protein_coding MGP_CBAJ_T0074854.1 MGP_CBAJ_G0029904.1 mouse_genomes_project 5 153573749 153584930 - Agfg2 protein_coding retained_intron MGP_CBAJ_T0074855.1 MGP_CBAJ_G0029904.1 mouse_genomes_project 5 153576765 153612281 - MGP_CBAJ_P0074855 Agfg2 protein_coding protein_coding MGP_CBAJ_T0074856.1 MGP_CBAJ_G0029904.1 mouse_genomes_project 5 153578539 153589398 - MGP_CBAJ_P0074856 Agfg2 protein_coding protein_coding MGP_CBAJ_T0074857.1 MGP_CBAJ_G0029904.1 mouse_genomes_project 5 153587891 153612248 - Agfg2 protein_coding retained_intron MGP_CBAJ_T0014852.1 MGP_CBAJ_G0012964.1 mouse_genomes_project 5 99945309 99945804 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001691.1 MGP_CBAJ_G0001609.1 mouse_genomes_project 5 109827500 109829334 + TEC TEC MGP_CBAJ_T0001438.1 MGP_CBAJ_G0001362.1 mouse_genomes_project 5 24058518 24060620 - TEC TEC MGP_CBAJ_T0001439.1 MGP_CBAJ_G0001362.1 mouse_genomes_project 5 24060084 24060618 - TEC TEC MGP_CBAJ_T0007970.1 MGP_CBAJ_G0006495.1 mouse_genomes_project 5 28015407 28069809 - Gm26608 lincRNA lincRNA MGP_CBAJ_T0007971.1 MGP_CBAJ_G0006495.1 mouse_genomes_project 5 28050430 28051938 - Gm26608 lincRNA lincRNA MGP_CBAJ_T0008303.1 MGP_CBAJ_G0006726.1 mouse_genomes_project 5 148626229 148692341 - Gm42624 lincRNA lincRNA MGP_CBAJ_T0008333.1 MGP_CBAJ_G0006750.1 mouse_genomes_project 5 163852805 163858995 - B230303O12Rik lincRNA lincRNA MGP_CBAJ_T0071393.1 MGP_CBAJ_G0029241.1 mouse_genomes_project 5 69611773 69654094 + MGP_CBAJ_P0071393 Klhl5 protein_coding protein_coding MGP_CBAJ_T0071394.1 MGP_CBAJ_G0029241.1 mouse_genomes_project 5 69611849 69616432 + Klhl5 protein_coding retained_intron MGP_CBAJ_T0071395.1 MGP_CBAJ_G0029241.1 mouse_genomes_project 5 69612094 69652978 + MGP_CBAJ_P0071395 Klhl5 protein_coding protein_coding MGP_CBAJ_T0071396.1 MGP_CBAJ_G0029241.1 mouse_genomes_project 5 69612100 69617389 + Klhl5 protein_coding processed_transcript MGP_CBAJ_T0071397.1 MGP_CBAJ_G0029241.1 mouse_genomes_project 5 69612368 69636474 + Klhl5 protein_coding processed_transcript MGP_CBAJ_T0071398.1 MGP_CBAJ_G0029241.1 mouse_genomes_project 5 69642040 69654094 + MGP_CBAJ_P0071398 Klhl5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0008181.1 MGP_CBAJ_G0006650.1 mouse_genomes_project 5 123180334 123217636 - E130006D01Rik lincRNA lincRNA MGP_CBAJ_T0008182.1 MGP_CBAJ_G0006650.1 mouse_genomes_project 5 123180353 123217658 - E130006D01Rik lincRNA lincRNA MGP_CBAJ_T0008183.1 MGP_CBAJ_G0006650.1 mouse_genomes_project 5 123180460 123217633 - E130006D01Rik lincRNA lincRNA MGP_CBAJ_T0001721.1 MGP_CBAJ_G0001639.1 mouse_genomes_project 5 122726903 122727710 - TEC TEC MGP_CBAJ_T0072750.1 MGP_CBAJ_G0029523.1 mouse_genomes_project 5 118988245 119015961 + MGP_CBAJ_P0072750 Pcgf3 protein_coding protein_coding MGP_CBAJ_T0072751.1 MGP_CBAJ_G0029523.1 mouse_genomes_project 5 118988245 119031806 + MGP_CBAJ_P0072751 Pcgf3 protein_coding protein_coding MGP_CBAJ_T0072752.1 MGP_CBAJ_G0029523.1 mouse_genomes_project 5 118988326 119013172 + MGP_CBAJ_P0072752 Pcgf3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072753.1 MGP_CBAJ_G0029523.1 mouse_genomes_project 5 119000921 119005544 + Pcgf3 protein_coding retained_intron MGP_CBAJ_T0072754.1 MGP_CBAJ_G0029523.1 mouse_genomes_project 5 119013220 119021149 + Pcgf3 protein_coding retained_intron MGP_CBAJ_T0011468.1 MGP_CBAJ_G0009606.1 mouse_genomes_project 5 86049055 86049346 - Gm22553 misc_RNA misc_RNA MGP_CBAJ_T0071975.1 MGP_CBAJ_G0029335.1 mouse_genomes_project 5 93507208 93527697 - MGP_CBAJ_P0071975 Gnrhr protein_coding protein_coding MGP_CBAJ_T0071976.1 MGP_CBAJ_G0029335.1 mouse_genomes_project 5 93508449 93527666 - MGP_CBAJ_P0071976 Gnrhr protein_coding protein_coding MGP_CBAJ_T0071977.1 MGP_CBAJ_G0029335.1 mouse_genomes_project 5 93511029 93527642 - MGP_CBAJ_P0071977 Gnrhr protein_coding protein_coding MGP_CBAJ_T0074680.1 MGP_CBAJ_G0029872.1 mouse_genomes_project 5 152365013 152569257 - MGP_CBAJ_P0074680 Col26a1 protein_coding protein_coding MGP_CBAJ_T0074681.1 MGP_CBAJ_G0029872.1 mouse_genomes_project 5 152365013 152569320 - MGP_CBAJ_P0074681 Col26a1 protein_coding protein_coding MGP_CBAJ_T0074682.1 MGP_CBAJ_G0029872.1 mouse_genomes_project 5 152366009 152367804 - Col26a1 protein_coding retained_intron MGP_CBAJ_T0074683.1 MGP_CBAJ_G0029872.1 mouse_genomes_project 5 152366328 152370956 - Col26a1 protein_coding retained_intron MGP_CBAJ_T0074684.1 MGP_CBAJ_G0029872.1 mouse_genomes_project 5 152376769 152569046 - Col26a1 protein_coding retained_intron MGP_CBAJ_T0074685.1 MGP_CBAJ_G0029872.1 mouse_genomes_project 5 152377488 152381667 - Col26a1 protein_coding retained_intron MGP_CBAJ_T0074686.1 MGP_CBAJ_G0029872.1 mouse_genomes_project 5 152383925 152569345 - Col26a1 protein_coding retained_intron MGP_CBAJ_T0074687.1 MGP_CBAJ_G0029872.1 mouse_genomes_project 5 152384099 152407508 - Col26a1 protein_coding processed_transcript MGP_CBAJ_T0074688.1 MGP_CBAJ_G0029872.1 mouse_genomes_project 5 152392693 152568879 - Col26a1 protein_coding processed_transcript MGP_CBAJ_T0074689.1 MGP_CBAJ_G0029872.1 mouse_genomes_project 5 152506374 152508786 - Col26a1 protein_coding retained_intron MGP_CBAJ_T0074690.1 MGP_CBAJ_G0029872.1 mouse_genomes_project 5 152507154 152569066 - Col26a1 protein_coding retained_intron MGP_CBAJ_T0071629.1 MGP_CBAJ_G0029276.1 mouse_genomes_project 5 76673135 76793467 - protein_coding processed_transcript MGP_CBAJ_T0071630.1 MGP_CBAJ_G0029276.1 mouse_genomes_project 5 76673290 76673522 - protein_coding transcribed_processed_pseudogene MGP_CBAJ_T0001797.1 MGP_CBAJ_G0001714.1 mouse_genomes_project 5 142740339 142743574 - TEC TEC MGP_CBAJ_T0070543.1 MGP_CBAJ_G0029098.1 mouse_genomes_project 5 32198945 32234102 + MGP_CBAJ_P0070543 Bre protein_coding protein_coding MGP_CBAJ_T0070544.1 MGP_CBAJ_G0029098.1 mouse_genomes_project 5 32199165 32234522 + Bre protein_coding retained_intron MGP_CBAJ_T0070545.1 MGP_CBAJ_G0029098.1 mouse_genomes_project 5 32199191 32211452 + Bre protein_coding processed_transcript MGP_CBAJ_T0070546.1 MGP_CBAJ_G0029098.1 mouse_genomes_project 5 32199192 32618855 + MGP_CBAJ_P0070546 Bre protein_coding protein_coding MGP_CBAJ_T0070547.1 MGP_CBAJ_G0029098.1 mouse_genomes_project 5 32199201 32531429 + Bre protein_coding retained_intron MGP_CBAJ_T0070548.1 MGP_CBAJ_G0029098.1 mouse_genomes_project 5 32199209 32348399 + Bre protein_coding retained_intron MGP_CBAJ_T0070549.1 MGP_CBAJ_G0029098.1 mouse_genomes_project 5 32199225 32618748 + MGP_CBAJ_P0070549 Bre protein_coding protein_coding MGP_CBAJ_T0070550.1 MGP_CBAJ_G0029098.1 mouse_genomes_project 5 32199245 32618640 + MGP_CBAJ_P0070550 Bre protein_coding protein_coding MGP_CBAJ_T0070551.1 MGP_CBAJ_G0029098.1 mouse_genomes_project 5 32199245 32618640 + MGP_CBAJ_P0070551 Bre protein_coding protein_coding MGP_CBAJ_T0070552.1 MGP_CBAJ_G0029098.1 mouse_genomes_project 5 32199245 32618640 + MGP_CBAJ_P0070552 Bre protein_coding protein_coding MGP_CBAJ_T0070553.1 MGP_CBAJ_G0029098.1 mouse_genomes_project 5 32199246 32338510 + MGP_CBAJ_P0070553 Bre protein_coding nonsense_mediated_decay MGP_CBAJ_T0070554.1 MGP_CBAJ_G0029098.1 mouse_genomes_project 5 32203042 32591680 + MGP_CBAJ_P0070554 Bre protein_coding nonsense_mediated_decay MGP_CBAJ_T0070555.1 MGP_CBAJ_G0029098.1 mouse_genomes_project 5 32297623 32338591 + Bre protein_coding processed_transcript MGP_CBAJ_T0070556.1 MGP_CBAJ_G0029098.1 mouse_genomes_project 5 32572963 32618654 + Bre protein_coding processed_transcript MGP_CBAJ_T0070557.1 MGP_CBAJ_G0029098.1 mouse_genomes_project 5 32613622 32618647 + Bre protein_coding processed_transcript MGP_CBAJ_T0098432.1 MGP_CBAJ_G0036694.1 mouse_genomes_project 5 168435021 168435286 + Gm42558 sense_intronic sense_intronic MGP_CBAJ_T0004641.1 MGP_CBAJ_G0004013.1 mouse_genomes_project 5 83424291 83431374 + Gm43261 antisense antisense MGP_CBAJ_T0008357.1 MGP_CBAJ_G0006771.1 mouse_genomes_project 5 167422588 167423616 + Gm43332 lincRNA lincRNA MGP_CBAJ_T0008093.1 MGP_CBAJ_G0006588.1 mouse_genomes_project 5 98856924 98860548 + lincRNA lincRNA MGP_CBAJ_T0007962.1 MGP_CBAJ_G0006491.1 mouse_genomes_project 5 25304546 25306000 + 1700096K18Rik lincRNA lincRNA MGP_CBAJ_T0074948.1 MGP_CBAJ_G0029926.1 mouse_genomes_project 5 154213745 154220187 + MGP_CBAJ_P0074948 Cnpy4 protein_coding protein_coding MGP_CBAJ_T0074949.1 MGP_CBAJ_G0029926.1 mouse_genomes_project 5 154216184 154218866 + MGP_CBAJ_P0074949 Cnpy4 protein_coding protein_coding MGP_CBAJ_T0074950.1 MGP_CBAJ_G0029926.1 mouse_genomes_project 5 154216379 154218419 + Cnpy4 protein_coding retained_intron MGP_CBAJ_T0073137.1 MGP_CBAJ_G0029599.1 mouse_genomes_project 5 126263659 126283600 - MGP_CBAJ_P0073137 Kctd10 protein_coding protein_coding MGP_CBAJ_T0073138.1 MGP_CBAJ_G0029599.1 mouse_genomes_project 5 126264554 126283581 - MGP_CBAJ_P0073138 Kctd10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073139.1 MGP_CBAJ_G0029599.1 mouse_genomes_project 5 126265714 126283575 - MGP_CBAJ_P0073139 Kctd10 protein_coding protein_coding MGP_CBAJ_T0073140.1 MGP_CBAJ_G0029599.1 mouse_genomes_project 5 126265798 126272235 - Kctd10 protein_coding processed_transcript MGP_CBAJ_T0073141.1 MGP_CBAJ_G0029599.1 mouse_genomes_project 5 126266975 126268762 - Kctd10 protein_coding retained_intron MGP_CBAJ_T0073142.1 MGP_CBAJ_G0029599.1 mouse_genomes_project 5 126266995 126270300 - Kctd10 protein_coding retained_intron MGP_CBAJ_T0073143.1 MGP_CBAJ_G0029599.1 mouse_genomes_project 5 126267076 126269345 - Kctd10 protein_coding retained_intron MGP_CBAJ_T0075508.1 MGP_CBAJ_G0030056.1 mouse_genomes_project 5 164734306 164746514 - MGP_CBAJ_P0075508 Mtif3 protein_coding protein_coding MGP_CBAJ_T0075509.1 MGP_CBAJ_G0030056.1 mouse_genomes_project 5 164737293 164746516 - MGP_CBAJ_P0075509 Mtif3 protein_coding protein_coding MGP_CBAJ_T0075510.1 MGP_CBAJ_G0030056.1 mouse_genomes_project 5 164738140 164746526 - MGP_CBAJ_P0075510 Mtif3 protein_coding protein_coding MGP_CBAJ_T0075511.1 MGP_CBAJ_G0030056.1 mouse_genomes_project 5 164738140 164746478 - MGP_CBAJ_P0075511 Mtif3 protein_coding protein_coding MGP_CBAJ_T0075512.1 MGP_CBAJ_G0030056.1 mouse_genomes_project 5 164741658 164746472 - MGP_CBAJ_P0075512 Mtif3 protein_coding protein_coding MGP_CBAJ_T0075513.1 MGP_CBAJ_G0030056.1 mouse_genomes_project 5 164741669 164746529 - MGP_CBAJ_P0075513 Mtif3 protein_coding protein_coding MGP_CBAJ_T0072046.1 MGP_CBAJ_G0029359.1 mouse_genomes_project 5 95275757 95296346 + MGP_CBAJ_P0072046 Csn1s2a protein_coding protein_coding MGP_CBAJ_T0072047.1 MGP_CBAJ_G0029359.1 mouse_genomes_project 5 95275757 95296346 + MGP_CBAJ_P0072047 Csn1s2a protein_coding protein_coding MGP_CBAJ_T0072048.1 MGP_CBAJ_G0029359.1 mouse_genomes_project 5 95275757 95296247 + MGP_CBAJ_P0072048 Csn1s2a protein_coding protein_coding MGP_CBAJ_T0072049.1 MGP_CBAJ_G0029359.1 mouse_genomes_project 5 95275771 95296247 + MGP_CBAJ_P0072049 Csn1s2a protein_coding protein_coding MGP_CBAJ_T0072050.1 MGP_CBAJ_G0029359.1 mouse_genomes_project 5 95275772 95281780 + Csn1s2a protein_coding retained_intron MGP_CBAJ_T0072051.1 MGP_CBAJ_G0029359.1 mouse_genomes_project 5 95276974 95280000 + Csn1s2a protein_coding retained_intron MGP_CBAJ_T0072052.1 MGP_CBAJ_G0029359.1 mouse_genomes_project 5 95278657 95281591 + Csn1s2a protein_coding retained_intron MGP_CBAJ_T0072053.1 MGP_CBAJ_G0029359.1 mouse_genomes_project 5 95280800 95289426 + Csn1s2a protein_coding retained_intron MGP_CBAJ_T0072054.1 MGP_CBAJ_G0029359.1 mouse_genomes_project 5 95289396 95296325 + Csn1s2a protein_coding retained_intron MGP_CBAJ_T0072055.1 MGP_CBAJ_G0029359.1 mouse_genomes_project 5 95292708 95294645 + Csn1s2a protein_coding retained_intron MGP_CBAJ_T0010576.1 MGP_CBAJ_G0008714.1 mouse_genomes_project 5 114132571 114132681 + Gm23616 miRNA miRNA MGP_CBAJ_T0073525.1 MGP_CBAJ_G0029675.1 mouse_genomes_project 5 133728488 133774678 - MGP_CBAJ_P0073525 Dtx1 protein_coding protein_coding MGP_CBAJ_T0073526.1 MGP_CBAJ_G0029675.1 mouse_genomes_project 5 133728489 133753078 - Dtx1 protein_coding retained_intron MGP_CBAJ_T0073527.1 MGP_CBAJ_G0029675.1 mouse_genomes_project 5 133728535 133730365 - Dtx1 protein_coding retained_intron MGP_CBAJ_T0073528.1 MGP_CBAJ_G0029675.1 mouse_genomes_project 5 133729488 133731201 - Dtx1 protein_coding retained_intron MGP_CBAJ_T0073529.1 MGP_CBAJ_G0029675.1 mouse_genomes_project 5 133729738 133731099 - Dtx1 protein_coding retained_intron MGP_CBAJ_T0073530.1 MGP_CBAJ_G0029675.1 mouse_genomes_project 5 133752395 133766705 - Dtx1 protein_coding processed_transcript MGP_CBAJ_T0071093.1 MGP_CBAJ_G0029190.1 mouse_genomes_project 5 45024182 45090592 + MGP_CBAJ_P0071093 Cpeb2 protein_coding protein_coding MGP_CBAJ_T0071094.1 MGP_CBAJ_G0029190.1 mouse_genomes_project 5 45024475 45090597 + MGP_CBAJ_P0071094 Cpeb2 protein_coding protein_coding MGP_CBAJ_T0071095.1 MGP_CBAJ_G0029190.1 mouse_genomes_project 5 45024939 45028932 + Cpeb2 protein_coding retained_intron MGP_CBAJ_T0071096.1 MGP_CBAJ_G0029190.1 mouse_genomes_project 5 45026050 45082159 + MGP_CBAJ_P0071096 Cpeb2 protein_coding protein_coding MGP_CBAJ_T0071097.1 MGP_CBAJ_G0029190.1 mouse_genomes_project 5 45026062 45026898 + Cpeb2 protein_coding processed_transcript MGP_CBAJ_T0071098.1 MGP_CBAJ_G0029190.1 mouse_genomes_project 5 45028327 45041129 + Cpeb2 protein_coding processed_transcript MGP_CBAJ_T0074940.1 MGP_CBAJ_G0029925.1 mouse_genomes_project 5 154204890 154213487 - MGP_CBAJ_P0074940 Taf6 protein_coding protein_coding MGP_CBAJ_T0074941.1 MGP_CBAJ_G0029925.1 mouse_genomes_project 5 154204890 154213712 - MGP_CBAJ_P0074941 Taf6 protein_coding protein_coding MGP_CBAJ_T0074942.1 MGP_CBAJ_G0029925.1 mouse_genomes_project 5 154204893 154213466 - MGP_CBAJ_P0074942 Taf6 protein_coding protein_coding MGP_CBAJ_T0074943.1 MGP_CBAJ_G0029925.1 mouse_genomes_project 5 154204901 154213482 - MGP_CBAJ_P0074943 Taf6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074944.1 MGP_CBAJ_G0029925.1 mouse_genomes_project 5 154206416 154207737 - Taf6 protein_coding retained_intron MGP_CBAJ_T0074945.1 MGP_CBAJ_G0029925.1 mouse_genomes_project 5 154208943 154213487 - MGP_CBAJ_P0074945 Taf6 protein_coding protein_coding MGP_CBAJ_T0074946.1 MGP_CBAJ_G0029925.1 mouse_genomes_project 5 154210183 154213476 - MGP_CBAJ_P0074946 Taf6 protein_coding protein_coding MGP_CBAJ_T0074947.1 MGP_CBAJ_G0029925.1 mouse_genomes_project 5 154212338 154213477 - Taf6 protein_coding processed_transcript MGP_CBAJ_T0070651.1 MGP_CBAJ_G0029117.1 mouse_genomes_project 5 34442542 34447203 - MGP_CBAJ_P0070651 Tmem129 protein_coding protein_coding MGP_CBAJ_T0070652.1 MGP_CBAJ_G0029117.1 mouse_genomes_project 5 34442549 34447275 - Tmem129 protein_coding retained_intron MGP_CBAJ_T0070653.1 MGP_CBAJ_G0029117.1 mouse_genomes_project 5 34444933 34447232 - Tmem129 protein_coding retained_intron MGP_CBAJ_T0071070.1 MGP_CBAJ_G0029181.1 mouse_genomes_project 5 39972187 39988485 - MGP_CBAJ_P0071070 Zfp518b protein_coding protein_coding MGP_CBAJ_T0071071.1 MGP_CBAJ_G0029181.1 mouse_genomes_project 5 39972189 39988409 - MGP_CBAJ_P0071071 Zfp518b protein_coding protein_coding MGP_CBAJ_T0071072.1 MGP_CBAJ_G0029181.1 mouse_genomes_project 5 39977875 39988485 - MGP_CBAJ_P0071072 Zfp518b protein_coding protein_coding MGP_CBAJ_T0071073.1 MGP_CBAJ_G0029181.1 mouse_genomes_project 5 39978326 39988416 - MGP_CBAJ_P0071073 Zfp518b protein_coding protein_coding MGP_CBAJ_T0014863.1 MGP_CBAJ_G0012975.1 mouse_genomes_project 5 109152210 109152668 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014848.1 MGP_CBAJ_G0012960.1 mouse_genomes_project 5 99862255 99862633 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101930.1 MGP_CBAJ_G0039961.1 mouse_genomes_project 5 15866447 15876825 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0008050.1 MGP_CBAJ_G0006554.1 mouse_genomes_project 5 69024005 69025961 - Gm42564 lincRNA lincRNA MGP_CBAJ_T0075590.1 MGP_CBAJ_G0030071.1 mouse_genomes_project 5 167031456 167096697 - MGP_CBAJ_P0075590 Katnal1 protein_coding unknown_likely_coding MGP_CBAJ_T0075591.1 MGP_CBAJ_G0030071.1 mouse_genomes_project 5 167031463 167096701 - MGP_CBAJ_P0075591 Katnal1 protein_coding protein_coding MGP_CBAJ_T0075592.1 MGP_CBAJ_G0030071.1 mouse_genomes_project 5 167035562 167040190 - Katnal1 protein_coding retained_intron MGP_CBAJ_T0075593.1 MGP_CBAJ_G0030071.1 mouse_genomes_project 5 167046725 167097054 - Katnal1 protein_coding processed_transcript MGP_CBAJ_T0075594.1 MGP_CBAJ_G0030071.1 mouse_genomes_project 5 167057889 167097374 - MGP_CBAJ_P0075594 Katnal1 protein_coding protein_coding MGP_CBAJ_T0075596.1 MGP_CBAJ_G0030071.1 mouse_genomes_project 5 167071877 167096682 - MGP_CBAJ_P0075596 Katnal1 protein_coding protein_coding MGP_CBAJ_T0075597.1 MGP_CBAJ_G0030071.1 mouse_genomes_project 5 167092674 167096719 - Katnal1 protein_coding processed_transcript MGP_CBAJ_T0070263.1 MGP_CBAJ_G0029056.1 mouse_genomes_project 5 30736963 30754214 + MGP_CBAJ_P0070263 1700001C02Rik protein_coding protein_coding MGP_CBAJ_T0070264.1 MGP_CBAJ_G0029056.1 mouse_genomes_project 5 30736971 30757355 + MGP_CBAJ_P0070264 1700001C02Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0070265.1 MGP_CBAJ_G0029056.1 mouse_genomes_project 5 30736975 30757399 + MGP_CBAJ_P0070265 1700001C02Rik protein_coding protein_coding MGP_CBAJ_T0070266.1 MGP_CBAJ_G0029056.1 mouse_genomes_project 5 30737000 30757378 + MGP_CBAJ_P0070266 1700001C02Rik protein_coding protein_coding MGP_CBAJ_T0008185.1 MGP_CBAJ_G0006652.1 mouse_genomes_project 5 123249659 123265127 + Gm42487 lincRNA lincRNA MGP_CBAJ_T0008186.1 MGP_CBAJ_G0006652.1 mouse_genomes_project 5 123251489 123265044 + Gm42487 lincRNA lincRNA MGP_CBAJ_T0007998.1 MGP_CBAJ_G0006513.1 mouse_genomes_project 5 39130877 39135018 + Gm20052 lincRNA lincRNA MGP_CBAJ_T0007999.1 MGP_CBAJ_G0006513.1 mouse_genomes_project 5 39131044 39132080 + Gm20052 lincRNA lincRNA MGP_CBAJ_T0008000.1 MGP_CBAJ_G0006513.1 mouse_genomes_project 5 39131455 39133900 + Gm20052 lincRNA lincRNA MGP_CBAJ_T0008001.1 MGP_CBAJ_G0006513.1 mouse_genomes_project 5 39131802 39134377 + Gm20052 lincRNA lincRNA MGP_CBAJ_T0008002.1 MGP_CBAJ_G0006513.1 mouse_genomes_project 5 39131813 39134238 + Gm20052 lincRNA lincRNA MGP_CBAJ_T0001769.1 MGP_CBAJ_G0001687.1 mouse_genomes_project 5 135735258 135737599 + TEC TEC MGP_CBAJ_T0001443.1 MGP_CBAJ_G0001366.1 mouse_genomes_project 5 27145306 27147902 + TEC TEC MGP_CBAJ_T0007945.1 MGP_CBAJ_G0006481.1 mouse_genomes_project 5 15444902 15447779 + Gm28710 lincRNA lincRNA MGP_CBAJ_T0001822.1 MGP_CBAJ_G0001739.1 mouse_genomes_project 5 146960903 146964740 - TEC TEC MGP_CBAJ_T0074545.1 MGP_CBAJ_G0029848.1 mouse_genomes_project 5 151020718 151023575 - MGP_CBAJ_P0074545 Ccl26 protein_coding protein_coding MGP_CBAJ_T0101936.1 MGP_CBAJ_G0039967.1 mouse_genomes_project 5 94383156 94403789 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0014960.1 MGP_CBAJ_G0013072.1 mouse_genomes_project 5 156559226 156559718 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001697.1 MGP_CBAJ_G0001615.1 mouse_genomes_project 5 111567177 111568522 + TEC TEC MGP_CBAJ_T0001736.1 MGP_CBAJ_G0001654.1 mouse_genomes_project 5 127012406 127012964 + TEC TEC MGP_CBAJ_T0014941.1 MGP_CBAJ_G0013053.1 mouse_genomes_project 5 151166816 151167673 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007947.1 MGP_CBAJ_G0006483.1 mouse_genomes_project 5 21678990 21682825 - Gm43657 lincRNA lincRNA MGP_CBAJ_T0101133.1 MGP_CBAJ_G0039326.1 mouse_genomes_project 5 61485544 61486118 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0071387.1 MGP_CBAJ_G0029239.1 mouse_genomes_project 5 69419009 69512854 + MGP_CBAJ_P0071387 Fam114a1 protein_coding protein_coding MGP_CBAJ_T0071388.1 MGP_CBAJ_G0029239.1 mouse_genomes_project 5 69421352 69454807 + MGP_CBAJ_P0071388 Fam114a1 protein_coding protein_coding MGP_CBAJ_T0071365.1 MGP_CBAJ_G0029235.1 mouse_genomes_project 5 68502235 68519359 + MGP_CBAJ_P0071365 protein_coding protein_coding MGP_CBAJ_T0071366.1 MGP_CBAJ_G0029235.1 mouse_genomes_project 5 68505344 68728171 + MGP_CBAJ_P0071366 protein_coding protein_coding MGP_CBAJ_T0071367.1 MGP_CBAJ_G0029235.1 mouse_genomes_project 5 68505713 68728171 + MGP_CBAJ_P0071367 protein_coding protein_coding MGP_CBAJ_T0071368.1 MGP_CBAJ_G0029235.1 mouse_genomes_project 5 68506104 68520100 + protein_coding retained_intron MGP_CBAJ_T0071369.1 MGP_CBAJ_G0029235.1 mouse_genomes_project 5 68506104 68728171 + MGP_CBAJ_P0071369 protein_coding protein_coding MGP_CBAJ_T0071370.1 MGP_CBAJ_G0029235.1 mouse_genomes_project 5 68583745 68728171 + MGP_CBAJ_P0071370 protein_coding protein_coding MGP_CBAJ_T0071371.1 MGP_CBAJ_G0029235.1 mouse_genomes_project 5 68635023 68644340 + MGP_CBAJ_P0071371 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071372.1 MGP_CBAJ_G0029235.1 mouse_genomes_project 5 68666790 68728166 + protein_coding processed_transcript MGP_CBAJ_T0001442.1 MGP_CBAJ_G0001365.1 mouse_genomes_project 5 27120688 27126033 + TEC TEC MGP_CBAJ_T0014689.1 MGP_CBAJ_G0012801.1 mouse_genomes_project 5 24856310 24856876 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008078.1 MGP_CBAJ_G0006576.1 mouse_genomes_project 5 83087918 83096044 - Gm15831 lincRNA lincRNA MGP_CBAJ_T0001746.1 MGP_CBAJ_G0001664.1 mouse_genomes_project 5 129578843 129581962 + TEC TEC MGP_CBAJ_T0071385.1 MGP_CBAJ_G0029238.1 mouse_genomes_project 5 69398509 69408888 - MGP_CBAJ_P0071385 protein_coding protein_coding MGP_CBAJ_T0071386.1 MGP_CBAJ_G0029238.1 mouse_genomes_project 5 69404058 69408938 - MGP_CBAJ_P0071386 protein_coding protein_coding MGP_CBAJ_T0014931.1 MGP_CBAJ_G0013043.1 mouse_genomes_project 5 138499573 138499937 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014634.1 MGP_CBAJ_G0012746.1 mouse_genomes_project 5 4829146 4829732 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008069.1 MGP_CBAJ_G0006569.1 mouse_genomes_project 5 81509246 81517236 + Gm43101 lincRNA lincRNA MGP_CBAJ_T0008070.1 MGP_CBAJ_G0006569.1 mouse_genomes_project 5 81516098 81517237 + Gm43101 lincRNA lincRNA MGP_CBAJ_T0007978.1 MGP_CBAJ_G0006501.1 mouse_genomes_project 5 32044167 32052427 - Gm43660 lincRNA lincRNA MGP_CBAJ_T0008029.1 MGP_CBAJ_G0006537.1 mouse_genomes_project 5 55083665 55083940 - Gm43179 lincRNA lincRNA MGP_CBAJ_T0014712.1 MGP_CBAJ_G0012824.1 mouse_genomes_project 5 32879565 32879754 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004626.1 MGP_CBAJ_G0004001.1 mouse_genomes_project 5 72461115 72465468 + Gm15478 antisense antisense MGP_CBAJ_T0008055.1 MGP_CBAJ_G0006558.1 mouse_genomes_project 5 77836038 77836938 - AU023070 lincRNA lincRNA MGP_CBAJ_T0001501.1 MGP_CBAJ_G0001422.1 mouse_genomes_project 5 46566093 46569880 - TEC TEC MGP_CBAJ_T0001802.1 MGP_CBAJ_G0001719.1 mouse_genomes_project 5 144177167 144179395 + TEC TEC MGP_CBAJ_T0072084.1 MGP_CBAJ_G0029375.1 mouse_genomes_project 5 96222362 96241557 + MGP_CBAJ_P0072084 Enam protein_coding protein_coding MGP_CBAJ_T0072085.1 MGP_CBAJ_G0029375.1 mouse_genomes_project 5 96222369 96242876 + MGP_CBAJ_P0072085 Enam protein_coding protein_coding MGP_CBAJ_T0069875.1 MGP_CBAJ_G0028977.1 mouse_genomes_project 5 20319076 20399068 + Gsap protein_coding retained_intron MGP_CBAJ_T0069876.1 MGP_CBAJ_G0028977.1 mouse_genomes_project 5 20319088 20438797 + MGP_CBAJ_P0069876 Gsap protein_coding nonsense_mediated_decay MGP_CBAJ_T0069877.1 MGP_CBAJ_G0028977.1 mouse_genomes_project 5 20319110 20438819 + MGP_CBAJ_P0069877 Gsap protein_coding protein_coding MGP_CBAJ_T0069878.1 MGP_CBAJ_G0028977.1 mouse_genomes_project 5 20319120 20321178 + Gsap protein_coding processed_transcript MGP_CBAJ_T0069879.1 MGP_CBAJ_G0028977.1 mouse_genomes_project 5 20319133 20391092 + MGP_CBAJ_P0069879 Gsap protein_coding nonsense_mediated_decay MGP_CBAJ_T0069880.1 MGP_CBAJ_G0028977.1 mouse_genomes_project 5 20319134 20435738 + MGP_CBAJ_P0069880 Gsap protein_coding protein_coding MGP_CBAJ_T0069881.1 MGP_CBAJ_G0028977.1 mouse_genomes_project 5 20319134 20435738 + MGP_CBAJ_P0069881 Gsap protein_coding nonsense_mediated_decay MGP_CBAJ_T0069882.1 MGP_CBAJ_G0028977.1 mouse_genomes_project 5 20390460 20397585 + Gsap protein_coding retained_intron MGP_CBAJ_T0069883.1 MGP_CBAJ_G0028977.1 mouse_genomes_project 5 20436884 20464683 + MGP_CBAJ_P0069883 Gsap protein_coding protein_coding MGP_CBAJ_T0069884.1 MGP_CBAJ_G0028977.1 mouse_genomes_project 5 20436964 20464684 + Gsap protein_coding processed_transcript MGP_CBAJ_T0017911.1 MGP_CBAJ_G0015348.1 mouse_genomes_project 5 98551980 98597600 - Gm43448 processed_transcript processed_transcript MGP_CBAJ_T0017912.1 MGP_CBAJ_G0015348.1 mouse_genomes_project 5 98572709 98597620 - Gm43448 processed_transcript processed_transcript MGP_CBAJ_T0014965.1 MGP_CBAJ_G0013077.1 mouse_genomes_project 5 159833682 159834266 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0071347.1 MGP_CBAJ_G0029230.1 mouse_genomes_project 5 67004223 67090909 + MGP_CBAJ_P0071347 Dthd1 protein_coding protein_coding MGP_CBAJ_T0001730.1 MGP_CBAJ_G0001648.1 mouse_genomes_project 5 125057016 125058216 - TEC TEC MGP_CBAJ_T0008344.1 MGP_CBAJ_G0006761.1 mouse_genomes_project 5 166924131 166934385 + lincRNA lincRNA MGP_CBAJ_T0073435.1 MGP_CBAJ_G0029654.1 mouse_genomes_project 5 130558994 130595104 + MGP_CBAJ_P0073435 Fbxo21 protein_coding protein_coding MGP_CBAJ_T0073436.1 MGP_CBAJ_G0029654.1 mouse_genomes_project 5 130559038 130569860 + Fbxo21 protein_coding retained_intron MGP_CBAJ_T0073437.1 MGP_CBAJ_G0029654.1 mouse_genomes_project 5 130559048 130595103 + MGP_CBAJ_P0073437 Fbxo21 protein_coding protein_coding MGP_CBAJ_T0073438.1 MGP_CBAJ_G0029654.1 mouse_genomes_project 5 130559092 130595105 + MGP_CBAJ_P0073438 Fbxo21 protein_coding protein_coding MGP_CBAJ_T0073439.1 MGP_CBAJ_G0029654.1 mouse_genomes_project 5 130559578 130568513 + Fbxo21 protein_coding processed_transcript MGP_CBAJ_T0073440.1 MGP_CBAJ_G0029654.1 mouse_genomes_project 5 130561608 130568399 + Fbxo21 protein_coding processed_transcript MGP_CBAJ_T0008103.1 MGP_CBAJ_G0006598.1 mouse_genomes_project 5 105865142 105881189 - Gm33370 lincRNA lincRNA MGP_CBAJ_T0014992.1 MGP_CBAJ_G0013104.1 mouse_genomes_project 5 166227498 166228977 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0072073.1 MGP_CBAJ_G0029366.1 mouse_genomes_project 5 95537106 95539212 + MGP_CBAJ_P0072073 Cabs1 protein_coding protein_coding MGP_CBAJ_T0001583.1 MGP_CBAJ_G0001503.1 mouse_genomes_project 5 66769664 66770708 - TEC TEC MGP_CBAJ_T0014693.1 MGP_CBAJ_G0012805.1 mouse_genomes_project 5 25306659 25306933 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001462.1 MGP_CBAJ_G0001383.1 mouse_genomes_project 5 33213529 33218392 - TEC TEC MGP_CBAJ_T0008021.1 MGP_CBAJ_G0006530.1 mouse_genomes_project 5 47003737 47471099 - lincRNA lincRNA MGP_CBAJ_T0008022.1 MGP_CBAJ_G0006530.1 mouse_genomes_project 5 47118755 47196412 - lincRNA lincRNA MGP_CBAJ_T0001681.1 MGP_CBAJ_G0001599.1 mouse_genomes_project 5 101563722 101565630 - TEC TEC MGP_CBAJ_T0074246.1 MGP_CBAJ_G0029797.1 mouse_genomes_project 5 144484835 144505956 - MGP_CBAJ_P0074246 Phkg1 protein_coding protein_coding MGP_CBAJ_T0074247.1 MGP_CBAJ_G0029797.1 mouse_genomes_project 5 144490294 144545179 - MGP_CBAJ_P0074247 Phkg1 protein_coding protein_coding MGP_CBAJ_T0074248.1 MGP_CBAJ_G0029797.1 mouse_genomes_project 5 144490299 144493289 - Phkg1 protein_coding retained_intron MGP_CBAJ_T0074249.1 MGP_CBAJ_G0029797.1 mouse_genomes_project 5 144493060 144495189 - Phkg1 protein_coding processed_transcript MGP_CBAJ_T0074250.1 MGP_CBAJ_G0029797.1 mouse_genomes_project 5 144504443 144505983 - Phkg1 protein_coding retained_intron MGP_CBAJ_T0004686.1 MGP_CBAJ_G0004042.1 mouse_genomes_project 5 119510036 119621957 + antisense antisense MGP_CBAJ_T0007966.1 MGP_CBAJ_G0006494.1 mouse_genomes_project 5 26315880 26349742 - 4930584F24Rik lincRNA lincRNA MGP_CBAJ_T0007967.1 MGP_CBAJ_G0006494.1 mouse_genomes_project 5 26315882 26349767 - 4930584F24Rik lincRNA lincRNA MGP_CBAJ_T0007968.1 MGP_CBAJ_G0006494.1 mouse_genomes_project 5 26315884 26349731 - 4930584F24Rik lincRNA lincRNA MGP_CBAJ_T0007969.1 MGP_CBAJ_G0006494.1 mouse_genomes_project 5 26331371 26349742 - 4930584F24Rik lincRNA lincRNA MGP_CBAJ_T0099357.1 MGP_CBAJ_G0037612.1 mouse_genomes_project 5 75276736 75276798 - Gm23067 snRNA snRNA MGP_CBAJ_T0008313.1 MGP_CBAJ_G0006733.1 mouse_genomes_project 5 153102124 153123180 - Gm42456 lincRNA lincRNA MGP_CBAJ_T0008221.1 MGP_CBAJ_G0006674.1 mouse_genomes_project 5 128706647 128708770 - 4930562A09Rik lincRNA lincRNA MGP_CBAJ_T0074358.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149433498 149526328 - MGP_CBAJ_P0074358 Gtf2i protein_coding protein_coding MGP_CBAJ_T0074359.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149433501 149526226 - MGP_CBAJ_P0074359 Gtf2i protein_coding protein_coding MGP_CBAJ_T0074360.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149433501 149526226 - MGP_CBAJ_P0074360 Gtf2i protein_coding protein_coding MGP_CBAJ_T0074361.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149433503 149526226 - MGP_CBAJ_P0074361 Gtf2i protein_coding protein_coding MGP_CBAJ_T0074362.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149433506 149501732 - MGP_CBAJ_P0074362 Gtf2i protein_coding protein_coding MGP_CBAJ_T0074363.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149433506 149501732 - MGP_CBAJ_P0074363 Gtf2i protein_coding protein_coding MGP_CBAJ_T0074364.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149433506 149501732 - MGP_CBAJ_P0074364 Gtf2i protein_coding protein_coding MGP_CBAJ_T0074365.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149433506 149526226 - MGP_CBAJ_P0074365 Gtf2i protein_coding protein_coding MGP_CBAJ_T0074366.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149433506 149501732 - MGP_CBAJ_P0074366 Gtf2i protein_coding protein_coding MGP_CBAJ_T0074367.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149433507 149475412 - Gtf2i protein_coding processed_transcript MGP_CBAJ_T0074368.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149434161 149439227 - MGP_CBAJ_P0074368 Gtf2i protein_coding protein_coding MGP_CBAJ_T0074369.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149434507 149438076 - Gtf2i protein_coding retained_intron MGP_CBAJ_T0074370.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149435177 149501673 - MGP_CBAJ_P0074370 Gtf2i protein_coding protein_coding MGP_CBAJ_T0074371.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149435319 149436710 - Gtf2i protein_coding retained_intron MGP_CBAJ_T0074372.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149436301 149440417 - Gtf2i protein_coding retained_intron MGP_CBAJ_T0074373.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149438416 149439409 - Gtf2i protein_coding retained_intron MGP_CBAJ_T0074374.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149451497 149468169 - Gtf2i protein_coding retained_intron MGP_CBAJ_T0074375.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149451523 149501623 - MGP_CBAJ_P0074375 Gtf2i protein_coding protein_coding MGP_CBAJ_T0074376.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149453694 149455023 - Gtf2i protein_coding processed_transcript MGP_CBAJ_T0074377.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149454788 149461330 - Gtf2i protein_coding processed_transcript MGP_CBAJ_T0074378.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149459246 149470575 - Gtf2i protein_coding processed_transcript MGP_CBAJ_T0074379.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149487895 149526012 - MGP_CBAJ_P0074379 Gtf2i protein_coding protein_coding MGP_CBAJ_T0074380.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149487926 149520975 - MGP_CBAJ_P0074380 Gtf2i protein_coding protein_coding MGP_CBAJ_T0074381.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149487926 149521270 - MGP_CBAJ_P0074381 Gtf2i protein_coding nonsense_mediated_decay MGP_CBAJ_T0074382.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149487952 149526226 - MGP_CBAJ_P0074382 Gtf2i protein_coding protein_coding MGP_CBAJ_T0074383.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149488006 149526226 - MGP_CBAJ_P0074383 Gtf2i protein_coding nonsense_mediated_decay MGP_CBAJ_T0074384.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149490212 149515647 - Gtf2i protein_coding retained_intron MGP_CBAJ_T0074385.1 MGP_CBAJ_G0029819.1 mouse_genomes_project 5 149501075 149503239 - Gtf2i protein_coding retained_intron MGP_CBAJ_T0014770.1 MGP_CBAJ_G0012882.1 mouse_genomes_project 5 63268325 63268704 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010605.1 MGP_CBAJ_G0008743.1 mouse_genomes_project 5 153420705 153420820 - Mir6418 miRNA miRNA MGP_CBAJ_T0099354.1 MGP_CBAJ_G0037609.1 mouse_genomes_project 5 74429310 74429417 - Gm23932 snRNA snRNA MGP_CBAJ_T0004811.1 MGP_CBAJ_G0004130.1 mouse_genomes_project 5 167701953 167703690 - Gm43151 antisense antisense MGP_CBAJ_T0010594.1 MGP_CBAJ_G0008732.1 mouse_genomes_project 5 149542915 149542984 + Mir3965 miRNA miRNA MGP_CBAJ_T0073196.1 MGP_CBAJ_G0029608.1 mouse_genomes_project 5 126742504 126776541 + MGP_CBAJ_P0073196 Ankrd13a protein_coding protein_coding MGP_CBAJ_T0073197.1 MGP_CBAJ_G0029608.1 mouse_genomes_project 5 126742772 126776917 + Ankrd13a protein_coding processed_transcript MGP_CBAJ_T0073198.1 MGP_CBAJ_G0029608.1 mouse_genomes_project 5 126753769 126774341 + MGP_CBAJ_P0073198 Ankrd13a protein_coding protein_coding MGP_CBAJ_T0073199.1 MGP_CBAJ_G0029608.1 mouse_genomes_project 5 126763469 126776917 + Ankrd13a protein_coding processed_transcript MGP_CBAJ_T0073200.1 MGP_CBAJ_G0029608.1 mouse_genomes_project 5 126770249 126776917 + Ankrd13a protein_coding processed_transcript MGP_CBAJ_T0073201.1 MGP_CBAJ_G0029608.1 mouse_genomes_project 5 126770363 126772356 + Ankrd13a protein_coding retained_intron MGP_CBAJ_T0073378.1 MGP_CBAJ_G0029642.1 mouse_genomes_project 5 128283123 128343987 - MGP_CBAJ_P0073378 Tmem233 protein_coding protein_coding MGP_CBAJ_T0008105.1 MGP_CBAJ_G0006600.1 mouse_genomes_project 5 105965408 105966567 - Gm9484 lincRNA lincRNA MGP_CBAJ_T0001420.1 MGP_CBAJ_G0001344.1 mouse_genomes_project 5 12964535 12967468 + TEC TEC MGP_CBAJ_T0075068.1 MGP_CBAJ_G0029950.1 mouse_genomes_project 5 155841466 155843823 + Gpr146 protein_coding processed_transcript MGP_CBAJ_T0075069.1 MGP_CBAJ_G0029950.1 mouse_genomes_project 5 155841511 155843824 + Gpr146 protein_coding processed_transcript MGP_CBAJ_T0075070.1 MGP_CBAJ_G0029950.1 mouse_genomes_project 5 155841932 155863646 + MGP_CBAJ_P0075070 Gpr146 protein_coding protein_coding MGP_CBAJ_T0075071.1 MGP_CBAJ_G0029950.1 mouse_genomes_project 5 155841989 155843029 + MGP_CBAJ_P0075071 Gpr146 protein_coding protein_coding MGP_CBAJ_T0075072.1 MGP_CBAJ_G0029950.1 mouse_genomes_project 5 155844350 155867298 + MGP_CBAJ_P0075072 Gpr146 protein_coding protein_coding MGP_CBAJ_T0075073.1 MGP_CBAJ_G0029950.1 mouse_genomes_project 5 155857360 155867297 + MGP_CBAJ_P0075073 Gpr146 protein_coding protein_coding MGP_CBAJ_T0070516.1 MGP_CBAJ_G0029095.1 mouse_genomes_project 5 32007124 32009535 + Slc4a1ap protein_coding retained_intron MGP_CBAJ_T0070517.1 MGP_CBAJ_G0029095.1 mouse_genomes_project 5 32007124 32037549 + MGP_CBAJ_P0070517 Slc4a1ap protein_coding protein_coding MGP_CBAJ_T0070518.1 MGP_CBAJ_G0029095.1 mouse_genomes_project 5 32007126 32014579 + Slc4a1ap protein_coding retained_intron MGP_CBAJ_T0070519.1 MGP_CBAJ_G0029095.1 mouse_genomes_project 5 32007126 32037816 + MGP_CBAJ_P0070519 Slc4a1ap protein_coding protein_coding MGP_CBAJ_T0070520.1 MGP_CBAJ_G0029095.1 mouse_genomes_project 5 32007141 32016979 + MGP_CBAJ_P0070520 Slc4a1ap protein_coding protein_coding MGP_CBAJ_T0070521.1 MGP_CBAJ_G0029095.1 mouse_genomes_project 5 32007141 32037554 + MGP_CBAJ_P0070521 Slc4a1ap protein_coding protein_coding MGP_CBAJ_T0070522.1 MGP_CBAJ_G0029095.1 mouse_genomes_project 5 32007730 32012358 + Slc4a1ap protein_coding retained_intron MGP_CBAJ_T0070523.1 MGP_CBAJ_G0029095.1 mouse_genomes_project 5 32012102 32015120 + Slc4a1ap protein_coding retained_intron MGP_CBAJ_T0070524.1 MGP_CBAJ_G0029095.1 mouse_genomes_project 5 32016292 32037520 + MGP_CBAJ_P0070524 Slc4a1ap protein_coding protein_coding MGP_CBAJ_T0070525.1 MGP_CBAJ_G0029095.1 mouse_genomes_project 5 32023751 32037550 + Slc4a1ap protein_coding retained_intron MGP_CBAJ_T0070526.1 MGP_CBAJ_G0029095.1 mouse_genomes_project 5 32023940 32037554 + MGP_CBAJ_P0070526 Slc4a1ap protein_coding protein_coding MGP_CBAJ_T0070527.1 MGP_CBAJ_G0029095.1 mouse_genomes_project 5 32024018 32037479 + MGP_CBAJ_P0070527 Slc4a1ap protein_coding protein_coding MGP_CBAJ_T0070528.1 MGP_CBAJ_G0029095.1 mouse_genomes_project 5 32031665 32040288 + Slc4a1ap protein_coding processed_transcript MGP_CBAJ_T0074572.1 MGP_CBAJ_G0029854.1 mouse_genomes_project 5 151254561 151266473 + MGP_CBAJ_P0074572 Mdh2 protein_coding protein_coding MGP_CBAJ_T0074573.1 MGP_CBAJ_G0029854.1 mouse_genomes_project 5 151254717 151256323 + Mdh2 protein_coding retained_intron MGP_CBAJ_T0074574.1 MGP_CBAJ_G0029854.1 mouse_genomes_project 5 151254743 151266480 + MGP_CBAJ_P0074574 Mdh2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074575.1 MGP_CBAJ_G0029854.1 mouse_genomes_project 5 151254758 151260696 + Mdh2 protein_coding retained_intron MGP_CBAJ_T0074576.1 MGP_CBAJ_G0029854.1 mouse_genomes_project 5 151254766 151263733 + MGP_CBAJ_P0074576 Mdh2 protein_coding protein_coding MGP_CBAJ_T0074577.1 MGP_CBAJ_G0029854.1 mouse_genomes_project 5 151254770 151262428 + MGP_CBAJ_P0074577 Mdh2 protein_coding protein_coding MGP_CBAJ_T0074578.1 MGP_CBAJ_G0029854.1 mouse_genomes_project 5 151254803 151259834 + Mdh2 protein_coding retained_intron MGP_CBAJ_T0070920.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37616066 37711457 - MGP_CBAJ_P0070920 Tbc1d14 protein_coding protein_coding MGP_CBAJ_T0070921.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37616066 37719529 - MGP_CBAJ_P0070921 Tbc1d14 protein_coding protein_coding MGP_CBAJ_T0070922.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37616066 37718935 - MGP_CBAJ_P0070922 Tbc1d14 protein_coding protein_coding MGP_CBAJ_T0070923.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37616067 37663991 - MGP_CBAJ_P0070923 Tbc1d14 protein_coding protein_coding MGP_CBAJ_T0070924.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37616070 37718924 - MGP_CBAJ_P0070924 Tbc1d14 protein_coding protein_coding MGP_CBAJ_T0070925.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37616070 37664970 - MGP_CBAJ_P0070925 Tbc1d14 protein_coding protein_coding MGP_CBAJ_T0070926.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37621868 37640991 - MGP_CBAJ_P0070926 Tbc1d14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070927.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37621986 37723385 - MGP_CBAJ_P0070927 Tbc1d14 protein_coding protein_coding MGP_CBAJ_T0070928.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37621988 37723377 - MGP_CBAJ_P0070928 Tbc1d14 protein_coding protein_coding MGP_CBAJ_T0070929.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37621993 37625752 - Tbc1d14 protein_coding processed_transcript MGP_CBAJ_T0070930.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37622193 37708025 - MGP_CBAJ_P0070930 Tbc1d14 protein_coding protein_coding MGP_CBAJ_T0070931.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37622261 37663916 - MGP_CBAJ_P0070931 Tbc1d14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070932.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37627499 37653819 - Tbc1d14 protein_coding retained_intron MGP_CBAJ_T0070933.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37652629 37663887 - MGP_CBAJ_P0070933 Tbc1d14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070934.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37658273 37663875 - Tbc1d14 protein_coding processed_transcript MGP_CBAJ_T0070935.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37677507 37719522 - Tbc1d14 protein_coding retained_intron MGP_CBAJ_T0070936.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37679384 37699338 - Tbc1d14 protein_coding processed_transcript MGP_CBAJ_T0070937.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37679446 37710625 - MGP_CBAJ_P0070937 Tbc1d14 protein_coding protein_coding MGP_CBAJ_T0070938.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37706448 37723344 - Tbc1d14 protein_coding retained_intron MGP_CBAJ_T0070939.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37708024 37723344 - MGP_CBAJ_P0070939 Tbc1d14 protein_coding protein_coding MGP_CBAJ_T0070940.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37708073 37710396 - MGP_CBAJ_P0070940 Tbc1d14 protein_coding protein_coding MGP_CBAJ_T0070941.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37708268 37734214 - MGP_CBAJ_P0070941 Tbc1d14 protein_coding protein_coding MGP_CBAJ_T0070942.1 MGP_CBAJ_G0029158.1 mouse_genomes_project 5 37709146 37734239 - MGP_CBAJ_P0070942 Tbc1d14 protein_coding protein_coding MGP_CBAJ_T0004721.1 MGP_CBAJ_G0004069.1 mouse_genomes_project 5 132424961 132429767 - Tbx3os1 antisense antisense MGP_CBAJ_T0004722.1 MGP_CBAJ_G0004069.1 mouse_genomes_project 5 132424964 132496231 - Tbx3os1 antisense antisense MGP_CBAJ_T0004723.1 MGP_CBAJ_G0004069.1 mouse_genomes_project 5 132425056 132425586 - Tbx3os1 antisense antisense MGP_CBAJ_T0004724.1 MGP_CBAJ_G0004069.1 mouse_genomes_project 5 132477697 132496308 - Tbx3os1 antisense antisense MGP_CBAJ_T0004725.1 MGP_CBAJ_G0004069.1 mouse_genomes_project 5 132478334 132496519 - Tbx3os1 antisense antisense MGP_CBAJ_T0004726.1 MGP_CBAJ_G0004069.1 mouse_genomes_project 5 132484219 132548009 - Tbx3os1 antisense antisense MGP_CBAJ_T0004793.1 MGP_CBAJ_G0004118.1 mouse_genomes_project 5 156719635 156726028 + Gm16121 antisense antisense MGP_CBAJ_T0010544.1 MGP_CBAJ_G0008682.1 mouse_genomes_project 5 29452859 29452926 - Gm23801 miRNA miRNA MGP_CBAJ_T0099399.1 MGP_CBAJ_G0037654.1 mouse_genomes_project 5 140761400 140761507 - Gm24839 snRNA snRNA MGP_CBAJ_T0008074.1 MGP_CBAJ_G0006573.1 mouse_genomes_project 5 81849916 81862613 + Gm32780 lincRNA lincRNA MGP_CBAJ_T0072957.1 MGP_CBAJ_G0029563.1 mouse_genomes_project 5 123179974 123180625 + MGP_CBAJ_P0072957 Gm26897 protein_coding protein_coding MGP_CBAJ_T0075074.1 MGP_CBAJ_G0029951.1 mouse_genomes_project 5 155876160 155886515 + MGP_CBAJ_P0075074 C130050O18Rik protein_coding protein_coding MGP_CBAJ_T0075075.1 MGP_CBAJ_G0029951.1 mouse_genomes_project 5 155877267 155886512 + MGP_CBAJ_P0075075 C130050O18Rik protein_coding protein_coding MGP_CBAJ_T0075076.1 MGP_CBAJ_G0029951.1 mouse_genomes_project 5 155877345 155886517 + MGP_CBAJ_P0075076 C130050O18Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0070821.1 MGP_CBAJ_G0029139.1 mouse_genomes_project 5 35864764 35882493 + Msantd1 protein_coding processed_transcript MGP_CBAJ_T0070822.1 MGP_CBAJ_G0029139.1 mouse_genomes_project 5 35879764 35888242 + MGP_CBAJ_P0070822 Msantd1 protein_coding unknown_likely_coding MGP_CBAJ_T0070823.1 MGP_CBAJ_G0029139.1 mouse_genomes_project 5 35880591 35888517 + MGP_CBAJ_P0070823 Msantd1 protein_coding protein_coding MGP_CBAJ_T0070824.1 MGP_CBAJ_G0029139.1 mouse_genomes_project 5 35882215 35888368 + MGP_CBAJ_P0070824 Msantd1 protein_coding protein_coding MGP_CBAJ_T0008034.1 MGP_CBAJ_G0006542.1 mouse_genomes_project 5 57391540 57400095 + Gm10440 lincRNA lincRNA MGP_CBAJ_T0014814.1 MGP_CBAJ_G0012926.1 mouse_genomes_project 5 82259352 82259504 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010591.1 MGP_CBAJ_G0008729.1 mouse_genomes_project 5 137936542 137936621 + Mir7032 miRNA miRNA MGP_CBAJ_T0004606.1 MGP_CBAJ_G0003984.1 mouse_genomes_project 5 47707993 47713053 + 9630001P10Rik antisense antisense MGP_CBAJ_T0004607.1 MGP_CBAJ_G0003984.1 mouse_genomes_project 5 47708567 47714754 + 9630001P10Rik antisense antisense MGP_CBAJ_T0004608.1 MGP_CBAJ_G0003984.1 mouse_genomes_project 5 47708661 47713376 + 9630001P10Rik antisense antisense MGP_CBAJ_T0071722.1 MGP_CBAJ_G0029293.1 mouse_genomes_project 5 78813735 78830279 - MGP_CBAJ_P0071722 Ociad2 protein_coding protein_coding MGP_CBAJ_T0071723.1 MGP_CBAJ_G0029293.1 mouse_genomes_project 5 78813737 78830362 - MGP_CBAJ_P0071723 Ociad2 protein_coding protein_coding MGP_CBAJ_T0071724.1 MGP_CBAJ_G0029293.1 mouse_genomes_project 5 78813737 78830359 - MGP_CBAJ_P0071724 Ociad2 protein_coding protein_coding MGP_CBAJ_T0071725.1 MGP_CBAJ_G0029293.1 mouse_genomes_project 5 78814870 78829969 - MGP_CBAJ_P0071725 Ociad2 protein_coding protein_coding MGP_CBAJ_T0071726.1 MGP_CBAJ_G0029293.1 mouse_genomes_project 5 78819243 78835090 - MGP_CBAJ_P0071726 Ociad2 protein_coding protein_coding MGP_CBAJ_T0071183.1 MGP_CBAJ_G0029205.1 mouse_genomes_project 5 47751188 47787876 + MGP_CBAJ_P0071183 Ncapg protein_coding protein_coding MGP_CBAJ_T0071184.1 MGP_CBAJ_G0029205.1 mouse_genomes_project 5 47757095 47787455 + Ncapg protein_coding retained_intron MGP_CBAJ_T0071185.1 MGP_CBAJ_G0029205.1 mouse_genomes_project 5 47758946 47763554 + Ncapg protein_coding retained_intron MGP_CBAJ_T0071186.1 MGP_CBAJ_G0029205.1 mouse_genomes_project 5 47758997 47787401 + Ncapg protein_coding retained_intron MGP_CBAJ_T0071187.1 MGP_CBAJ_G0029205.1 mouse_genomes_project 5 47779354 47784250 + Ncapg protein_coding retained_intron MGP_CBAJ_T0071190.1 MGP_CBAJ_G0029205.1 mouse_genomes_project 5 47785987 47787398 + Ncapg protein_coding retained_intron MGP_CBAJ_T0008095.1 MGP_CBAJ_G0006590.1 mouse_genomes_project 5 99313793 99342540 - Gm19619 lincRNA lincRNA MGP_CBAJ_T0001549.1 MGP_CBAJ_G0001469.1 mouse_genomes_project 5 54164747 54166678 + TEC TEC MGP_CBAJ_T0014833.1 MGP_CBAJ_G0012945.1 mouse_genomes_project 5 95083705 95084114 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004541.1 MGP_CBAJ_G0003932.1 mouse_genomes_project 5 428155 439458 - Gm17590 antisense antisense MGP_CBAJ_T0004542.1 MGP_CBAJ_G0003932.1 mouse_genomes_project 5 428365 428473 - Gm17590 antisense antisense MGP_CBAJ_T0072063.1 MGP_CBAJ_G0029362.1 mouse_genomes_project 5 95422246 95433568 + MGP_CBAJ_P0072063 Odam protein_coding protein_coding MGP_CBAJ_T0072064.1 MGP_CBAJ_G0029362.1 mouse_genomes_project 5 95422912 95432139 + MGP_CBAJ_P0072064 Odam protein_coding protein_coding MGP_CBAJ_T0075466.1 MGP_CBAJ_G0030042.1 mouse_genomes_project 5 163785374 163795010 - MGP_CBAJ_P0075466 protein_coding protein_coding MGP_CBAJ_T0072583.1 MGP_CBAJ_G0029491.1 mouse_genomes_project 5 115497266 115573196 + MGP_CBAJ_P0072583 Lrrc8b protein_coding protein_coding MGP_CBAJ_T0074933.1 MGP_CBAJ_G0029924.1 mouse_genomes_project 5 154198101 154206698 + MGP_CBAJ_P0074933 Ap4m1 protein_coding protein_coding MGP_CBAJ_T0074934.1 MGP_CBAJ_G0029924.1 mouse_genomes_project 5 154198104 154201287 + MGP_CBAJ_P0074934 Ap4m1 protein_coding protein_coding MGP_CBAJ_T0074935.1 MGP_CBAJ_G0029924.1 mouse_genomes_project 5 154198146 154200646 + Ap4m1 protein_coding retained_intron MGP_CBAJ_T0074936.1 MGP_CBAJ_G0029924.1 mouse_genomes_project 5 154198167 154204955 + MGP_CBAJ_P0074936 Ap4m1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074937.1 MGP_CBAJ_G0029924.1 mouse_genomes_project 5 154198682 154201218 + Ap4m1 protein_coding retained_intron MGP_CBAJ_T0074938.1 MGP_CBAJ_G0029924.1 mouse_genomes_project 5 154201059 154203474 + Ap4m1 protein_coding retained_intron MGP_CBAJ_T0074939.1 MGP_CBAJ_G0029924.1 mouse_genomes_project 5 154202842 154204961 + Ap4m1 protein_coding retained_intron MGP_CBAJ_T0070346.1 MGP_CBAJ_G0029070.1 mouse_genomes_project 5 31278583 31286933 + MGP_CBAJ_P0070346 Tcf23 protein_coding protein_coding MGP_CBAJ_T0069675.1 MGP_CBAJ_G0028938.1 mouse_genomes_project 5 3030433 3043996 - MGP_CBAJ_P0069675 Steap1 protein_coding protein_coding MGP_CBAJ_T0069676.1 MGP_CBAJ_G0028938.1 mouse_genomes_project 5 3030441 3034512 - MGP_CBAJ_P0069676 Steap1 protein_coding protein_coding MGP_CBAJ_T0073824.1 MGP_CBAJ_G0029725.1 mouse_genomes_project 5 136763640 136777246 - MGP_CBAJ_P0073824 Morn3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073825.1 MGP_CBAJ_G0029725.1 mouse_genomes_project 5 136763660 136765592 - MGP_CBAJ_P0073825 Morn3 protein_coding protein_coding MGP_CBAJ_T0073826.1 MGP_CBAJ_G0029725.1 mouse_genomes_project 5 136763733 136765600 - MGP_CBAJ_P0073826 Morn3 protein_coding protein_coding MGP_CBAJ_T0073827.1 MGP_CBAJ_G0029725.1 mouse_genomes_project 5 136765170 136777005 - MGP_CBAJ_P0073827 Morn3 protein_coding protein_coding MGP_CBAJ_T0073828.1 MGP_CBAJ_G0029725.1 mouse_genomes_project 5 136765192 136777235 - MGP_CBAJ_P0073828 Morn3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072648.1 MGP_CBAJ_G0029501.1 mouse_genomes_project 5 117661152 117735090 + MGP_CBAJ_P0072648 protein_coding protein_coding MGP_CBAJ_T0072649.1 MGP_CBAJ_G0029501.1 mouse_genomes_project 5 117661168 117680724 + MGP_CBAJ_P0072649 protein_coding protein_coding MGP_CBAJ_T0072650.1 MGP_CBAJ_G0029501.1 mouse_genomes_project 5 117661185 117672075 + protein_coding processed_transcript MGP_CBAJ_T0072651.1 MGP_CBAJ_G0029501.1 mouse_genomes_project 5 117705530 117734501 + protein_coding processed_transcript MGP_CBAJ_T0074548.1 MGP_CBAJ_G0029850.1 mouse_genomes_project 5 151097020 151112245 + MGP_CBAJ_P0074548 Rhbdd2 protein_coding protein_coding MGP_CBAJ_T0074549.1 MGP_CBAJ_G0029850.1 mouse_genomes_project 5 151097056 151112317 + MGP_CBAJ_P0074549 Rhbdd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074550.1 MGP_CBAJ_G0029850.1 mouse_genomes_project 5 151097106 151102020 + Rhbdd2 protein_coding processed_transcript MGP_CBAJ_T0074551.1 MGP_CBAJ_G0029850.1 mouse_genomes_project 5 151097118 151100018 + Rhbdd2 protein_coding retained_intron MGP_CBAJ_T0074552.1 MGP_CBAJ_G0029850.1 mouse_genomes_project 5 151097125 151100948 + Rhbdd2 protein_coding retained_intron MGP_CBAJ_T0074553.1 MGP_CBAJ_G0029850.1 mouse_genomes_project 5 151099504 151104700 + MGP_CBAJ_P0074553 Rhbdd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074554.1 MGP_CBAJ_G0029850.1 mouse_genomes_project 5 151100934 151110396 + Rhbdd2 protein_coding retained_intron MGP_CBAJ_T0072364.1 MGP_CBAJ_G0029442.1 mouse_genomes_project 5 107362393 107391458 + MGP_CBAJ_P0072364 Fgf5 protein_coding protein_coding MGP_CBAJ_T0072365.1 MGP_CBAJ_G0029442.1 mouse_genomes_project 5 107362621 107389891 + MGP_CBAJ_P0072365 Fgf5 protein_coding protein_coding MGP_CBAJ_T0001773.1 MGP_CBAJ_G0001691.1 mouse_genomes_project 5 136113319 136117997 + TEC TEC MGP_CBAJ_T0014643.1 MGP_CBAJ_G0012755.1 mouse_genomes_project 5 7931669 7933134 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014959.1 MGP_CBAJ_G0013071.1 mouse_genomes_project 5 156256878 156257254 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014832.1 MGP_CBAJ_G0012944.1 mouse_genomes_project 5 94615262 94616814 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014971.1 MGP_CBAJ_G0013083.1 mouse_genomes_project 5 161604080 161604293 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001723.1 MGP_CBAJ_G0001641.1 mouse_genomes_project 5 123922009 123923270 + TEC TEC MGP_CBAJ_T0070170.1 MGP_CBAJ_G0029038.1 mouse_genomes_project 5 28476940 28492189 - MGP_CBAJ_P0070170 Shh protein_coding protein_coding MGP_CBAJ_T0074888.1 MGP_CBAJ_G0029912.1 mouse_genomes_project 5 153836478 153857420 - MGP_CBAJ_P0074888 Pilrb2 protein_coding protein_coding MGP_CBAJ_T0074893.1 MGP_CBAJ_G0029912.1 mouse_genomes_project 5 153856738 153857477 - MGP_CBAJ_P0074893 Pilrb2 protein_coding protein_coding MGP_CBAJ_T0073053.1 MGP_CBAJ_G0029584.1 mouse_genomes_project 5 125491659 125496503 + MGP_CBAJ_P0073053 Ficd protein_coding protein_coding MGP_CBAJ_T0010573.1 MGP_CBAJ_G0008711.1 mouse_genomes_project 5 107631787 107631896 - Mir703 miRNA miRNA MGP_CBAJ_T0072088.1 MGP_CBAJ_G0029377.1 mouse_genomes_project 5 96295772 96297401 + MGP_CBAJ_P0072088 Utp3 protein_coding protein_coding MGP_CBAJ_T0075172.1 MGP_CBAJ_G0029974.1 mouse_genomes_project 5 157462964 157535326 - MGP_CBAJ_P0075172 Gna12 protein_coding protein_coding MGP_CBAJ_T0001467.1 MGP_CBAJ_G0001388.1 mouse_genomes_project 5 34520261 34523864 - TEC TEC MGP_CBAJ_T0072848.1 MGP_CBAJ_G0029544.1 mouse_genomes_project 5 121464884 121520052 + MGP_CBAJ_P0072848 Golga3 protein_coding protein_coding MGP_CBAJ_T0072849.1 MGP_CBAJ_G0029544.1 mouse_genomes_project 5 121465040 121479387 + Golga3 protein_coding retained_intron MGP_CBAJ_T0072850.1 MGP_CBAJ_G0029544.1 mouse_genomes_project 5 121465062 121477454 + MGP_CBAJ_P0072850 Golga3 protein_coding protein_coding MGP_CBAJ_T0072851.1 MGP_CBAJ_G0029544.1 mouse_genomes_project 5 121465062 121516767 + MGP_CBAJ_P0072851 Golga3 protein_coding protein_coding MGP_CBAJ_T0072852.1 MGP_CBAJ_G0029544.1 mouse_genomes_project 5 121465080 121481300 + Golga3 protein_coding retained_intron MGP_CBAJ_T0004624.1 MGP_CBAJ_G0003999.1 mouse_genomes_project 5 72052318 72053621 - Gm42670 antisense antisense MGP_CBAJ_T0074509.1 MGP_CBAJ_G0029840.1 mouse_genomes_project 5 150572598 150586125 + MGP_CBAJ_P0074509 Bcl7b protein_coding protein_coding MGP_CBAJ_T0074510.1 MGP_CBAJ_G0029840.1 mouse_genomes_project 5 150572704 150577764 + MGP_CBAJ_P0074510 Bcl7b protein_coding protein_coding MGP_CBAJ_T0074511.1 MGP_CBAJ_G0029840.1 mouse_genomes_project 5 150572727 150586101 + MGP_CBAJ_P0074511 Bcl7b protein_coding protein_coding MGP_CBAJ_T0074512.1 MGP_CBAJ_G0029840.1 mouse_genomes_project 5 150572760 150584865 + MGP_CBAJ_P0074512 Bcl7b protein_coding protein_coding MGP_CBAJ_T0074513.1 MGP_CBAJ_G0029840.1 mouse_genomes_project 5 150583878 150585395 + Bcl7b protein_coding retained_intron MGP_CBAJ_T0074651.1 MGP_CBAJ_G0029868.1 mouse_genomes_project 5 151748560 151771611 - MGP_CBAJ_P0074651 Prkrip1 protein_coding protein_coding MGP_CBAJ_T0074652.1 MGP_CBAJ_G0029868.1 mouse_genomes_project 5 151751510 151771558 - Prkrip1 protein_coding processed_transcript MGP_CBAJ_T0074653.1 MGP_CBAJ_G0029868.1 mouse_genomes_project 5 151751848 151770470 - MGP_CBAJ_P0074653 Prkrip1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074654.1 MGP_CBAJ_G0029868.1 mouse_genomes_project 5 151751853 151771556 - MGP_CBAJ_P0074654 Prkrip1 protein_coding protein_coding MGP_CBAJ_T0074015.1 MGP_CBAJ_G0029755.1 mouse_genomes_project 5 138324751 138336762 + MGP_CBAJ_P0074015 2810006K23Rik protein_coding protein_coding MGP_CBAJ_T0074016.1 MGP_CBAJ_G0029755.1 mouse_genomes_project 5 138324760 138339295 + MGP_CBAJ_P0074016 2810006K23Rik protein_coding protein_coding MGP_CBAJ_T0004735.1 MGP_CBAJ_G0004077.1 mouse_genomes_project 5 135308464 135309098 + 1700008B11Rik antisense antisense MGP_CBAJ_T0008193.1 MGP_CBAJ_G0006657.1 mouse_genomes_project 5 123749586 123751023 + lincRNA lincRNA MGP_CBAJ_T0071230.1 MGP_CBAJ_G0029209.1 mouse_genomes_project 5 50720706 51108551 - Kcnip4 protein_coding processed_transcript MGP_CBAJ_T0071231.1 MGP_CBAJ_G0029209.1 mouse_genomes_project 5 50720706 51263336 - MGP_CBAJ_P0071231 Kcnip4 protein_coding protein_coding MGP_CBAJ_T0071232.1 MGP_CBAJ_G0029209.1 mouse_genomes_project 5 50720706 50941903 - MGP_CBAJ_P0071232 Kcnip4 protein_coding protein_coding MGP_CBAJ_T0071233.1 MGP_CBAJ_G0029209.1 mouse_genomes_project 5 50720706 51988272 - MGP_CBAJ_P0071233 Kcnip4 protein_coding protein_coding MGP_CBAJ_T0071234.1 MGP_CBAJ_G0029209.1 mouse_genomes_project 5 50720707 50824104 - Kcnip4 protein_coding processed_transcript MGP_CBAJ_T0071235.1 MGP_CBAJ_G0029209.1 mouse_genomes_project 5 50720711 51988129 - MGP_CBAJ_P0071235 Kcnip4 protein_coding protein_coding MGP_CBAJ_T0071236.1 MGP_CBAJ_G0029209.1 mouse_genomes_project 5 50720716 51710357 - MGP_CBAJ_P0071236 Kcnip4 protein_coding protein_coding MGP_CBAJ_T0071239.1 MGP_CBAJ_G0029209.1 mouse_genomes_project 5 50727238 51108551 - Kcnip4 protein_coding processed_transcript MGP_CBAJ_T0073247.1 MGP_CBAJ_G0029622.1 mouse_genomes_project 5 127225316 127240426 - MGP_CBAJ_P0073247 Mlec protein_coding protein_coding MGP_CBAJ_T0073248.1 MGP_CBAJ_G0029622.1 mouse_genomes_project 5 127230449 127233303 - Mlec protein_coding processed_transcript MGP_CBAJ_T0074601.1 MGP_CBAJ_G0029860.1 mouse_genomes_project 5 151517796 151562824 + MGP_CBAJ_P0074601 Dtx2 protein_coding protein_coding MGP_CBAJ_T0074602.1 MGP_CBAJ_G0029860.1 mouse_genomes_project 5 151517807 151562816 + MGP_CBAJ_P0074602 Dtx2 protein_coding protein_coding MGP_CBAJ_T0074603.1 MGP_CBAJ_G0029860.1 mouse_genomes_project 5 151517840 151562823 + MGP_CBAJ_P0074603 Dtx2 protein_coding protein_coding MGP_CBAJ_T0074604.1 MGP_CBAJ_G0029860.1 mouse_genomes_project 5 151517843 151539315 + MGP_CBAJ_P0074604 Dtx2 protein_coding protein_coding MGP_CBAJ_T0074605.1 MGP_CBAJ_G0029860.1 mouse_genomes_project 5 151517854 151562818 + MGP_CBAJ_P0074605 Dtx2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074606.1 MGP_CBAJ_G0029860.1 mouse_genomes_project 5 151517873 151562816 + MGP_CBAJ_P0074606 Dtx2 protein_coding protein_coding MGP_CBAJ_T0074607.1 MGP_CBAJ_G0029860.1 mouse_genomes_project 5 151517878 151537240 + MGP_CBAJ_P0074607 Dtx2 protein_coding protein_coding MGP_CBAJ_T0074608.1 MGP_CBAJ_G0029860.1 mouse_genomes_project 5 151518147 151519448 + Dtx2 protein_coding processed_transcript MGP_CBAJ_T0074609.1 MGP_CBAJ_G0029860.1 mouse_genomes_project 5 151546661 151562816 + Dtx2 protein_coding retained_intron MGP_CBAJ_T0074524.1 MGP_CBAJ_G0029844.1 mouse_genomes_project 5 150789194 150807993 + MGP_CBAJ_P0074524 Trim50 protein_coding unknown_likely_coding MGP_CBAJ_T0074525.1 MGP_CBAJ_G0029844.1 mouse_genomes_project 5 150790666 150808344 + MGP_CBAJ_P0074525 Trim50 protein_coding protein_coding MGP_CBAJ_T0001820.1 MGP_CBAJ_G0001737.1 mouse_genomes_project 5 146917283 146920039 - TEC TEC MGP_CBAJ_T0098422.1 MGP_CBAJ_G0036687.1 mouse_genomes_project 5 149504689 149505105 - Gm43480 sense_intronic sense_intronic MGP_CBAJ_T0001594.1 MGP_CBAJ_G0001513.1 mouse_genomes_project 5 69947339 69948815 - TEC TEC MGP_CBAJ_T0074229.1 MGP_CBAJ_G0029794.1 mouse_genomes_project 5 144368499 144415583 + MGP_CBAJ_P0074229 Gbas protein_coding protein_coding MGP_CBAJ_T0074230.1 MGP_CBAJ_G0029794.1 mouse_genomes_project 5 144368535 144415506 + MGP_CBAJ_P0074230 Gbas protein_coding nonsense_mediated_decay MGP_CBAJ_T0074231.1 MGP_CBAJ_G0029794.1 mouse_genomes_project 5 144368537 144414629 + MGP_CBAJ_P0074231 Gbas protein_coding nonsense_mediated_decay MGP_CBAJ_T0074232.1 MGP_CBAJ_G0029794.1 mouse_genomes_project 5 144407878 144414458 + Gbas protein_coding retained_intron MGP_CBAJ_T0074233.1 MGP_CBAJ_G0029794.1 mouse_genomes_project 5 144408450 144410085 + Gbas protein_coding processed_transcript MGP_CBAJ_T0014867.1 MGP_CBAJ_G0012979.1 mouse_genomes_project 5 111077188 111077987 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0072989.1 MGP_CBAJ_G0029571.1 mouse_genomes_project 5 123939137 123947055 - MGP_CBAJ_P0072989 Asphd2 protein_coding protein_coding MGP_CBAJ_T0072990.1 MGP_CBAJ_G0029571.1 mouse_genomes_project 5 123940231 123944555 - Asphd2 protein_coding processed_transcript MGP_CBAJ_T0072991.1 MGP_CBAJ_G0029571.1 mouse_genomes_project 5 123946340 123948866 - MGP_CBAJ_P0072991 Asphd2 protein_coding protein_coding MGP_CBAJ_T0072992.1 MGP_CBAJ_G0029571.1 mouse_genomes_project 5 123946529 123949703 - MGP_CBAJ_P0072992 Asphd2 protein_coding protein_coding MGP_CBAJ_T0072993.1 MGP_CBAJ_G0029571.1 mouse_genomes_project 5 123946617 123948800 - MGP_CBAJ_P0072993 Asphd2 protein_coding protein_coding MGP_CBAJ_T0072994.1 MGP_CBAJ_G0029571.1 mouse_genomes_project 5 123946652 123949138 - MGP_CBAJ_P0072994 Asphd2 protein_coding protein_coding MGP_CBAJ_T0072995.1 MGP_CBAJ_G0029571.1 mouse_genomes_project 5 123946722 123948772 - MGP_CBAJ_P0072995 Asphd2 protein_coding protein_coding MGP_CBAJ_T0001764.1 MGP_CBAJ_G0001682.1 mouse_genomes_project 5 134857724 134858813 + TEC TEC MGP_CBAJ_T0011483.1 MGP_CBAJ_G0009621.1 mouse_genomes_project 5 130824736 130825026 - Gm24050 misc_RNA misc_RNA MGP_CBAJ_T0070858.1 MGP_CBAJ_G0029144.1 mouse_genomes_project 5 36285011 36288458 + MGP_CBAJ_P0070858 Adra2c protein_coding protein_coding MGP_CBAJ_T0014976.1 MGP_CBAJ_G0013088.1 mouse_genomes_project 5 162796175 162796368 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014703.1 MGP_CBAJ_G0012815.1 mouse_genomes_project 5 29657753 29658110 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007946.1 MGP_CBAJ_G0006482.1 mouse_genomes_project 5 17287725 17296223 - Gm43030 lincRNA lincRNA MGP_CBAJ_T0004755.1 MGP_CBAJ_G0004090.1 mouse_genomes_project 5 138819434 138819946 - Gm43777 antisense antisense MGP_CBAJ_T0099342.1 MGP_CBAJ_G0037597.1 mouse_genomes_project 5 33609711 33609811 + Gm24003 snRNA snRNA MGP_CBAJ_T0014900.1 MGP_CBAJ_G0013012.1 mouse_genomes_project 5 120791794 120792157 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004784.1 MGP_CBAJ_G0004114.1 mouse_genomes_project 5 154463752 154466371 + 6330418K02Rik antisense antisense MGP_CBAJ_T0004785.1 MGP_CBAJ_G0004114.1 mouse_genomes_project 5 154463763 154466042 + 6330418K02Rik antisense antisense MGP_CBAJ_T0004786.1 MGP_CBAJ_G0004114.1 mouse_genomes_project 5 154463778 154466371 + 6330418K02Rik antisense antisense MGP_CBAJ_T0004787.1 MGP_CBAJ_G0004114.1 mouse_genomes_project 5 154463817 154465939 + 6330418K02Rik antisense antisense MGP_CBAJ_T0004788.1 MGP_CBAJ_G0004114.1 mouse_genomes_project 5 154465253 154465793 + 6330418K02Rik antisense antisense MGP_CBAJ_T0001682.1 MGP_CBAJ_G0001600.1 mouse_genomes_project 5 105736128 105738274 + TEC TEC MGP_CBAJ_T0070328.1 MGP_CBAJ_G0029067.1 mouse_genomes_project 5 31231809 31241628 + MGP_CBAJ_P0070328 Khk protein_coding protein_coding MGP_CBAJ_T0070329.1 MGP_CBAJ_G0029067.1 mouse_genomes_project 5 31231967 31241426 + MGP_CBAJ_P0070329 Khk protein_coding protein_coding MGP_CBAJ_T0070330.1 MGP_CBAJ_G0029067.1 mouse_genomes_project 5 31232210 31241569 + MGP_CBAJ_P0070330 Khk protein_coding protein_coding MGP_CBAJ_T0070331.1 MGP_CBAJ_G0029067.1 mouse_genomes_project 5 31232235 31241173 + MGP_CBAJ_P0070331 Khk protein_coding protein_coding MGP_CBAJ_T0070332.1 MGP_CBAJ_G0029067.1 mouse_genomes_project 5 31240993 31241625 + Khk protein_coding retained_intron MGP_CBAJ_T0075015.1 MGP_CBAJ_G0029942.1 mouse_genomes_project 5 155419885 155552053 - MGP_CBAJ_P0075015 Prkar1b protein_coding protein_coding MGP_CBAJ_T0075016.1 MGP_CBAJ_G0029942.1 mouse_genomes_project 5 155421242 155426387 - Prkar1b protein_coding processed_transcript MGP_CBAJ_T0075017.1 MGP_CBAJ_G0029942.1 mouse_genomes_project 5 155448085 155550145 - MGP_CBAJ_P0075017 Prkar1b protein_coding protein_coding MGP_CBAJ_T0075018.1 MGP_CBAJ_G0029942.1 mouse_genomes_project 5 155458485 155552489 - MGP_CBAJ_P0075018 Prkar1b protein_coding protein_coding MGP_CBAJ_T0075019.1 MGP_CBAJ_G0029942.1 mouse_genomes_project 5 155473419 155534378 - MGP_CBAJ_P0075019 Prkar1b protein_coding protein_coding MGP_CBAJ_T0075020.1 MGP_CBAJ_G0029942.1 mouse_genomes_project 5 155530374 155552906 - MGP_CBAJ_P0075020 Prkar1b protein_coding protein_coding MGP_CBAJ_T0075021.1 MGP_CBAJ_G0029942.1 mouse_genomes_project 5 155530401 155575725 - MGP_CBAJ_P0075021 Prkar1b protein_coding protein_coding MGP_CBAJ_T0075022.1 MGP_CBAJ_G0029942.1 mouse_genomes_project 5 155530467 155552713 - MGP_CBAJ_P0075022 Prkar1b protein_coding protein_coding MGP_CBAJ_T0075023.1 MGP_CBAJ_G0029942.1 mouse_genomes_project 5 155573777 155575681 - Prkar1b protein_coding processed_transcript MGP_CBAJ_T0074858.1 MGP_CBAJ_G0029905.1 mouse_genomes_project 5 153667495 153677585 - MGP_CBAJ_P0074858 Nyap1 protein_coding protein_coding MGP_CBAJ_T0074859.1 MGP_CBAJ_G0029905.1 mouse_genomes_project 5 153668509 153679194 - MGP_CBAJ_P0074859 Nyap1 protein_coding protein_coding MGP_CBAJ_T0074860.1 MGP_CBAJ_G0029905.1 mouse_genomes_project 5 153669277 153677305 - MGP_CBAJ_P0074860 Nyap1 protein_coding unknown_likely_coding MGP_CBAJ_T0074861.1 MGP_CBAJ_G0029905.1 mouse_genomes_project 5 153670524 153678689 - MGP_CBAJ_P0074861 Nyap1 protein_coding protein_coding MGP_CBAJ_T0001796.1 MGP_CBAJ_G0001713.1 mouse_genomes_project 5 142682864 142684813 - TEC TEC MGP_CBAJ_T0001823.1 MGP_CBAJ_G0001740.1 mouse_genomes_project 5 146975404 146982245 - TEC TEC MGP_CBAJ_T0010606.1 MGP_CBAJ_G0008744.1 mouse_genomes_project 5 154191420 154191504 - Mir25 miRNA miRNA MGP_CBAJ_T0101958.1 MGP_CBAJ_G0039989.1 mouse_genomes_project 5 160189619 160190558 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0001574.1 MGP_CBAJ_G0001494.1 mouse_genomes_project 5 61536689 61538556 + TEC TEC MGP_CBAJ_T0071028.1 MGP_CBAJ_G0029175.1 mouse_genomes_project 5 39484255 39494490 + MGP_CBAJ_P0071028 Lyar protein_coding protein_coding MGP_CBAJ_T0071029.1 MGP_CBAJ_G0029175.1 mouse_genomes_project 5 39484293 39491702 + MGP_CBAJ_P0071029 Lyar protein_coding protein_coding MGP_CBAJ_T0071030.1 MGP_CBAJ_G0029175.1 mouse_genomes_project 5 39484300 39494491 + MGP_CBAJ_P0071030 Lyar protein_coding protein_coding MGP_CBAJ_T0071031.1 MGP_CBAJ_G0029175.1 mouse_genomes_project 5 39484302 39494775 + MGP_CBAJ_P0071031 Lyar protein_coding nonsense_mediated_decay MGP_CBAJ_T0071032.1 MGP_CBAJ_G0029175.1 mouse_genomes_project 5 39484312 39498092 + MGP_CBAJ_P0071032 Lyar protein_coding protein_coding MGP_CBAJ_T0071033.1 MGP_CBAJ_G0029175.1 mouse_genomes_project 5 39484323 39489700 + MGP_CBAJ_P0071033 Lyar protein_coding protein_coding MGP_CBAJ_T0071034.1 MGP_CBAJ_G0029175.1 mouse_genomes_project 5 39484327 39491886 + MGP_CBAJ_P0071034 Lyar protein_coding protein_coding MGP_CBAJ_T0071035.1 MGP_CBAJ_G0029175.1 mouse_genomes_project 5 39486750 39494470 + MGP_CBAJ_P0071035 Lyar protein_coding nonsense_mediated_decay MGP_CBAJ_T0071036.1 MGP_CBAJ_G0029175.1 mouse_genomes_project 5 39488434 39490247 + Lyar protein_coding retained_intron MGP_CBAJ_T0001607.1 MGP_CBAJ_G0001526.1 mouse_genomes_project 5 70524865 70531076 + TEC TEC MGP_CBAJ_T0001644.1 MGP_CBAJ_G0001563.1 mouse_genomes_project 5 78194497 78196604 - TEC TEC MGP_CBAJ_T0073713.1 MGP_CBAJ_G0029711.1 mouse_genomes_project 5 135960994 135969685 + MGP_CBAJ_P0073713 Vps29 protein_coding protein_coding MGP_CBAJ_T0073714.1 MGP_CBAJ_G0029711.1 mouse_genomes_project 5 135961015 135968891 + MGP_CBAJ_P0073714 Vps29 protein_coding protein_coding MGP_CBAJ_T0073715.1 MGP_CBAJ_G0029711.1 mouse_genomes_project 5 135961018 135968636 + Vps29 protein_coding processed_transcript MGP_CBAJ_T0073716.1 MGP_CBAJ_G0029711.1 mouse_genomes_project 5 135961031 135969610 + MGP_CBAJ_P0073716 Vps29 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073717.1 MGP_CBAJ_G0029711.1 mouse_genomes_project 5 135961049 135968585 + MGP_CBAJ_P0073717 Vps29 protein_coding protein_coding MGP_CBAJ_T0073718.1 MGP_CBAJ_G0029711.1 mouse_genomes_project 5 135961069 135968667 + MGP_CBAJ_P0073718 Vps29 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073719.1 MGP_CBAJ_G0029711.1 mouse_genomes_project 5 135961083 135970563 + MGP_CBAJ_P0073719 Vps29 protein_coding protein_coding MGP_CBAJ_T0073720.1 MGP_CBAJ_G0029711.1 mouse_genomes_project 5 135964025 135967389 + Vps29 protein_coding retained_intron MGP_CBAJ_T0014664.1 MGP_CBAJ_G0012776.1 mouse_genomes_project 5 20247092 20247466 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0070570.1 MGP_CBAJ_G0029101.1 mouse_genomes_project 5 33046936 33084256 + MGP_CBAJ_P0070570 Ppp1cb protein_coding protein_coding MGP_CBAJ_T0070571.1 MGP_CBAJ_G0029101.1 mouse_genomes_project 5 33047245 33110534 + MGP_CBAJ_P0070571 Ppp1cb protein_coding nonsense_mediated_decay MGP_CBAJ_T0070572.1 MGP_CBAJ_G0029101.1 mouse_genomes_project 5 33047279 33051845 + Ppp1cb protein_coding retained_intron MGP_CBAJ_T0070573.1 MGP_CBAJ_G0029101.1 mouse_genomes_project 5 33065699 33074048 + Ppp1cb protein_coding processed_transcript MGP_CBAJ_T0070574.1 MGP_CBAJ_G0029101.1 mouse_genomes_project 5 33074705 33081493 + MGP_CBAJ_P0070574 Ppp1cb protein_coding nonsense_mediated_decay MGP_CBAJ_T0072578.1 MGP_CBAJ_G0029490.1 mouse_genomes_project 5 115153477 115177777 - MGP_CBAJ_P0072578 Gbp4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072579.1 MGP_CBAJ_G0029490.1 mouse_genomes_project 5 115153477 115177777 - MGP_CBAJ_P0072579 Gbp4 protein_coding protein_coding MGP_CBAJ_T0072580.1 MGP_CBAJ_G0029490.1 mouse_genomes_project 5 115160622 115177736 - MGP_CBAJ_P0072580 Gbp4 protein_coding protein_coding MGP_CBAJ_T0072581.1 MGP_CBAJ_G0029490.1 mouse_genomes_project 5 115160686 115177735 - MGP_CBAJ_P0072581 Gbp4 protein_coding protein_coding MGP_CBAJ_T0072582.1 MGP_CBAJ_G0029490.1 mouse_genomes_project 5 115171599 115177742 - Gbp4 protein_coding retained_intron MGP_CBAJ_T0072588.1 MGP_CBAJ_G0029493.1 mouse_genomes_project 5 115832037 115954432 + MGP_CBAJ_P0072588 Lrrc8d protein_coding protein_coding MGP_CBAJ_T0072589.1 MGP_CBAJ_G0029493.1 mouse_genomes_project 5 115832856 115954427 + MGP_CBAJ_P0072589 Lrrc8d protein_coding protein_coding MGP_CBAJ_T0072590.1 MGP_CBAJ_G0029493.1 mouse_genomes_project 5 115832877 115861934 + Lrrc8d protein_coding retained_intron MGP_CBAJ_T0072591.1 MGP_CBAJ_G0029493.1 mouse_genomes_project 5 115832933 115861932 + Lrrc8d protein_coding processed_transcript MGP_CBAJ_T0072592.1 MGP_CBAJ_G0029493.1 mouse_genomes_project 5 115859084 115951053 + MGP_CBAJ_P0072592 Lrrc8d protein_coding protein_coding MGP_CBAJ_T0072593.1 MGP_CBAJ_G0029493.1 mouse_genomes_project 5 115859481 115951064 + MGP_CBAJ_P0072593 Lrrc8d protein_coding protein_coding MGP_CBAJ_T0072594.1 MGP_CBAJ_G0029493.1 mouse_genomes_project 5 115859687 115952855 + Lrrc8d protein_coding processed_transcript MGP_CBAJ_T0072595.1 MGP_CBAJ_G0029493.1 mouse_genomes_project 5 115859760 115951220 + MGP_CBAJ_P0072595 Lrrc8d protein_coding protein_coding MGP_CBAJ_T0072596.1 MGP_CBAJ_G0029493.1 mouse_genomes_project 5 115859927 115973747 + Lrrc8d protein_coding processed_transcript MGP_CBAJ_T0072597.1 MGP_CBAJ_G0029493.1 mouse_genomes_project 5 115963594 115973746 + Lrrc8d protein_coding processed_transcript MGP_CBAJ_T0008355.1 MGP_CBAJ_G0006769.1 mouse_genomes_project 5 167342666 167344040 + Gm42787 lincRNA lincRNA MGP_CBAJ_T0014662.1 MGP_CBAJ_G0012774.1 mouse_genomes_project 5 19275251 19275591 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0075285.1 MGP_CBAJ_G0029998.1 mouse_genomes_project 5 160524833 160543698 + MGP_CBAJ_P0075285 Kdelr2 protein_coding protein_coding MGP_CBAJ_T0071127.1 MGP_CBAJ_G0029197.1 mouse_genomes_project 5 45868031 45989017 - MGP_CBAJ_P0071127 Prom1 protein_coding protein_coding MGP_CBAJ_T0071128.1 MGP_CBAJ_G0029197.1 mouse_genomes_project 5 45868033 45988744 - MGP_CBAJ_P0071128 Prom1 protein_coding protein_coding MGP_CBAJ_T0071129.1 MGP_CBAJ_G0029197.1 mouse_genomes_project 5 45868033 45989095 - MGP_CBAJ_P0071129 Prom1 protein_coding protein_coding MGP_CBAJ_T0071130.1 MGP_CBAJ_G0029197.1 mouse_genomes_project 5 45868033 45879299 - MGP_CBAJ_P0071130 Prom1 protein_coding protein_coding MGP_CBAJ_T0071131.1 MGP_CBAJ_G0029197.1 mouse_genomes_project 5 45868033 45986288 - MGP_CBAJ_P0071131 Prom1 protein_coding protein_coding MGP_CBAJ_T0071132.1 MGP_CBAJ_G0029197.1 mouse_genomes_project 5 45868036 45981831 - MGP_CBAJ_P0071132 Prom1 protein_coding protein_coding MGP_CBAJ_T0071133.1 MGP_CBAJ_G0029197.1 mouse_genomes_project 5 45868036 45981831 - MGP_CBAJ_P0071133 Prom1 protein_coding protein_coding MGP_CBAJ_T0071134.1 MGP_CBAJ_G0029197.1 mouse_genomes_project 5 45875659 45986255 - MGP_CBAJ_P0071134 Prom1 protein_coding protein_coding MGP_CBAJ_T0071135.1 MGP_CBAJ_G0029197.1 mouse_genomes_project 5 45875822 45981776 - MGP_CBAJ_P0071135 Prom1 protein_coding protein_coding MGP_CBAJ_T0071136.1 MGP_CBAJ_G0029197.1 mouse_genomes_project 5 45875822 45981776 - MGP_CBAJ_P0071136 Prom1 protein_coding protein_coding MGP_CBAJ_T0071137.1 MGP_CBAJ_G0029197.1 mouse_genomes_project 5 45875822 45981831 - MGP_CBAJ_P0071137 Prom1 protein_coding protein_coding MGP_CBAJ_T0071138.1 MGP_CBAJ_G0029197.1 mouse_genomes_project 5 45886878 45909035 - Prom1 protein_coding retained_intron MGP_CBAJ_T0071139.1 MGP_CBAJ_G0029197.1 mouse_genomes_project 5 45902809 45926082 - MGP_CBAJ_P0071139 Prom1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071140.1 MGP_CBAJ_G0029197.1 mouse_genomes_project 5 45905694 45925156 - Prom1 protein_coding retained_intron MGP_CBAJ_T0071141.1 MGP_CBAJ_G0029197.1 mouse_genomes_project 5 45924532 45989021 - Prom1 protein_coding retained_intron MGP_CBAJ_T0071142.1 MGP_CBAJ_G0029197.1 mouse_genomes_project 5 45928158 45952812 - Prom1 protein_coding processed_transcript MGP_CBAJ_T0071143.1 MGP_CBAJ_G0029197.1 mouse_genomes_project 5 45939635 45986249 - MGP_CBAJ_P0071143 Prom1 protein_coding protein_coding MGP_CBAJ_T0071144.1 MGP_CBAJ_G0029197.1 mouse_genomes_project 5 45986717 45989021 - Prom1 protein_coding processed_transcript MGP_CBAJ_T0073304.1 MGP_CBAJ_G0029634.1 mouse_genomes_project 5 127646834 127655287 - MGP_CBAJ_P0073304 Sirt4 protein_coding protein_coding MGP_CBAJ_T0073305.1 MGP_CBAJ_G0029634.1 mouse_genomes_project 5 127646834 127655715 - MGP_CBAJ_P0073305 Sirt4 protein_coding protein_coding MGP_CBAJ_T0073306.1 MGP_CBAJ_G0029634.1 mouse_genomes_project 5 127646837 127650819 - Sirt4 protein_coding retained_intron MGP_CBAJ_T0073307.1 MGP_CBAJ_G0029634.1 mouse_genomes_project 5 127651040 127653846 - Sirt4 protein_coding retained_intron MGP_CBAJ_T0073308.1 MGP_CBAJ_G0029634.1 mouse_genomes_project 5 127651111 127655335 - Sirt4 protein_coding processed_transcript MGP_CBAJ_T0073309.1 MGP_CBAJ_G0029634.1 mouse_genomes_project 5 127653451 127655356 - Sirt4 protein_coding retained_intron MGP_CBAJ_T0014924.1 MGP_CBAJ_G0013036.1 mouse_genomes_project 5 134895899 134896232 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101132.1 MGP_CBAJ_G0039325.1 mouse_genomes_project 5 59788116 59866872 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0014658.1 MGP_CBAJ_G0012770.1 mouse_genomes_project 5 17147040 17147500 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0017878.1 MGP_CBAJ_G0015336.1 mouse_genomes_project 5 37721919 37758091 - Gm42936 processed_transcript processed_transcript MGP_CBAJ_T0070699.1 MGP_CBAJ_G0029122.1 mouse_genomes_project 5 34717187 34747531 - MGP_CBAJ_P0070699 Nelfa protein_coding protein_coding MGP_CBAJ_T0070700.1 MGP_CBAJ_G0029122.1 mouse_genomes_project 5 34729599 34747368 - Nelfa protein_coding retained_intron MGP_CBAJ_T0001712.1 MGP_CBAJ_G0001630.1 mouse_genomes_project 5 118198668 118200014 - TEC TEC MGP_CBAJ_T0070069.1 MGP_CBAJ_G0029013.1 mouse_genomes_project 5 24158934 24176380 - MGP_CBAJ_P0070069 4931409K22Rik protein_coding protein_coding MGP_CBAJ_T0070070.1 MGP_CBAJ_G0029013.1 mouse_genomes_project 5 24158934 24176380 - MGP_CBAJ_P0070070 4931409K22Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0070071.1 MGP_CBAJ_G0029013.1 mouse_genomes_project 5 24158950 24170731 - 4931409K22Rik protein_coding retained_intron MGP_CBAJ_T0070072.1 MGP_CBAJ_G0029013.1 mouse_genomes_project 5 24170732 24176439 - MGP_CBAJ_P0070072 4931409K22Rik protein_coding protein_coding MGP_CBAJ_T0070073.1 MGP_CBAJ_G0029013.1 mouse_genomes_project 5 24170741 24177779 - 4931409K22Rik protein_coding processed_transcript MGP_CBAJ_T0008032.1 MGP_CBAJ_G0006540.1 mouse_genomes_project 5 56152337 56154036 + lincRNA lincRNA MGP_CBAJ_T0098411.1 MGP_CBAJ_G0036677.1 mouse_genomes_project 5 108750572 108751311 - Gm16227 sense_intronic sense_intronic MGP_CBAJ_T0069738.1 MGP_CBAJ_G0028948.1 mouse_genomes_project 5 6453960 6513321 + MGP_CBAJ_P0069738 Abcb1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0069739.1 MGP_CBAJ_G0028948.1 mouse_genomes_project 5 6453966 6473608 + MGP_CBAJ_P0069739 Abcb1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0069740.1 MGP_CBAJ_G0028948.1 mouse_genomes_project 5 6453999 6532845 + MGP_CBAJ_P0069740 Abcb1b protein_coding protein_coding MGP_CBAJ_T0069741.1 MGP_CBAJ_G0028948.1 mouse_genomes_project 5 6486143 6488613 + Abcb1b protein_coding retained_intron MGP_CBAJ_T0069742.1 MGP_CBAJ_G0028948.1 mouse_genomes_project 5 6502374 6517122 + Abcb1b protein_coding processed_transcript MGP_CBAJ_T0069743.1 MGP_CBAJ_G0028948.1 mouse_genomes_project 5 6511729 6513321 + Abcb1b protein_coding retained_intron MGP_CBAJ_T0069744.1 MGP_CBAJ_G0028948.1 mouse_genomes_project 5 6514882 6517281 + Abcb1b protein_coding retained_intron MGP_CBAJ_T0069745.1 MGP_CBAJ_G0028948.1 mouse_genomes_project 5 6515087 6532465 + MGP_CBAJ_P0069745 Abcb1b protein_coding protein_coding MGP_CBAJ_T0069746.1 MGP_CBAJ_G0028948.1 mouse_genomes_project 5 6515355 6518381 + Abcb1b protein_coding retained_intron MGP_CBAJ_T0070952.1 MGP_CBAJ_G0029162.1 mouse_genomes_project 5 37960245 37986026 - MGP_CBAJ_P0070952 Man2b2 protein_coding protein_coding MGP_CBAJ_T0070953.1 MGP_CBAJ_G0029162.1 mouse_genomes_project 5 37962195 37968336 - MGP_CBAJ_P0070953 Man2b2 protein_coding protein_coding MGP_CBAJ_T0070954.1 MGP_CBAJ_G0029162.1 mouse_genomes_project 5 37962201 37973057 - MGP_CBAJ_P0070954 Man2b2 protein_coding protein_coding MGP_CBAJ_T0073621.1 MGP_CBAJ_G0029699.1 mouse_genomes_project 5 135093033 135126107 + MGP_CBAJ_P0073621 Brap protein_coding nonsense_mediated_decay MGP_CBAJ_T0073622.1 MGP_CBAJ_G0029699.1 mouse_genomes_project 5 135093060 135096434 + Brap protein_coding retained_intron MGP_CBAJ_T0073623.1 MGP_CBAJ_G0029699.1 mouse_genomes_project 5 135093226 135126113 + MGP_CBAJ_P0073623 Brap protein_coding protein_coding MGP_CBAJ_T0073624.1 MGP_CBAJ_G0029699.1 mouse_genomes_project 5 135094501 135107944 + MGP_CBAJ_P0073624 Brap protein_coding nonsense_mediated_decay MGP_CBAJ_T0073625.1 MGP_CBAJ_G0029699.1 mouse_genomes_project 5 135094510 135098219 + MGP_CBAJ_P0073625 Brap protein_coding protein_coding MGP_CBAJ_T0073626.1 MGP_CBAJ_G0029699.1 mouse_genomes_project 5 135094540 135096166 + Brap protein_coding retained_intron MGP_CBAJ_T0073627.1 MGP_CBAJ_G0029699.1 mouse_genomes_project 5 135099103 135126112 + Brap protein_coding processed_transcript MGP_CBAJ_T0073628.1 MGP_CBAJ_G0029699.1 mouse_genomes_project 5 135120452 135126109 + Brap protein_coding retained_intron MGP_CBAJ_T0072335.1 MGP_CBAJ_G0029434.1 mouse_genomes_project 5 105275759 105720761 + MGP_CBAJ_P0072335 Fras1 protein_coding protein_coding MGP_CBAJ_T0072336.1 MGP_CBAJ_G0029434.1 mouse_genomes_project 5 105276010 105453400 + Fras1 protein_coding retained_intron MGP_CBAJ_T0072337.1 MGP_CBAJ_G0029434.1 mouse_genomes_project 5 105276239 105290021 + Fras1 protein_coding retained_intron MGP_CBAJ_T0072338.1 MGP_CBAJ_G0029434.1 mouse_genomes_project 5 105535956 105559662 + Fras1 protein_coding processed_transcript MGP_CBAJ_T0072339.1 MGP_CBAJ_G0029434.1 mouse_genomes_project 5 105536173 105559774 + Fras1 protein_coding processed_transcript MGP_CBAJ_T0072340.1 MGP_CBAJ_G0029434.1 mouse_genomes_project 5 105551531 105559662 + Fras1 protein_coding processed_transcript MGP_CBAJ_T0075310.1 MGP_CBAJ_G0030005.1 mouse_genomes_project 5 161011424 161015701 - MGP_CBAJ_P0075310 Ankrd61 protein_coding protein_coding MGP_CBAJ_T0075311.1 MGP_CBAJ_G0030005.1 mouse_genomes_project 5 161011424 161015664 - MGP_CBAJ_P0075311 Ankrd61 protein_coding protein_coding MGP_CBAJ_T0075312.1 MGP_CBAJ_G0030005.1 mouse_genomes_project 5 161011426 161020088 - MGP_CBAJ_P0075312 Ankrd61 protein_coding protein_coding MGP_CBAJ_T0099362.1 MGP_CBAJ_G0037617.1 mouse_genomes_project 5 81322738 81322843 - Gm24502 snRNA snRNA MGP_CBAJ_T0008089.1 MGP_CBAJ_G0006584.1 mouse_genomes_project 5 94112354 94210232 + Gm43055 lincRNA lincRNA MGP_CBAJ_T0014777.1 MGP_CBAJ_G0012889.1 mouse_genomes_project 5 64755201 64755970 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007942.1 MGP_CBAJ_G0006479.1 mouse_genomes_project 5 14312864 14337524 - 4930519H02Rik lincRNA lincRNA MGP_CBAJ_T0007943.1 MGP_CBAJ_G0006479.1 mouse_genomes_project 5 14317778 14337587 - 4930519H02Rik lincRNA lincRNA MGP_CBAJ_T0101123.1 MGP_CBAJ_G0039318.1 mouse_genomes_project 5 22297444 22298009 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0075262.1 MGP_CBAJ_G0029994.1 mouse_genomes_project 5 160391717 160396319 - MGP_CBAJ_P0075262 Zfp853 protein_coding protein_coding MGP_CBAJ_T0074633.1 MGP_CBAJ_G0029865.1 mouse_genomes_project 5 151688145 151701427 - MGP_CBAJ_P0074633 Lrwd1 protein_coding protein_coding MGP_CBAJ_T0074634.1 MGP_CBAJ_G0029865.1 mouse_genomes_project 5 151688440 151701354 - Lrwd1 protein_coding retained_intron MGP_CBAJ_T0074635.1 MGP_CBAJ_G0029865.1 mouse_genomes_project 5 151688448 151690933 - Lrwd1 protein_coding retained_intron MGP_CBAJ_T0074636.1 MGP_CBAJ_G0029865.1 mouse_genomes_project 5 151689065 151695618 - MGP_CBAJ_P0074636 Lrwd1 protein_coding protein_coding MGP_CBAJ_T0074637.1 MGP_CBAJ_G0029865.1 mouse_genomes_project 5 151694774 151701375 - Lrwd1 protein_coding retained_intron MGP_CBAJ_T0074638.1 MGP_CBAJ_G0029865.1 mouse_genomes_project 5 151696048 151701355 - Lrwd1 protein_coding retained_intron MGP_CBAJ_T0074639.1 MGP_CBAJ_G0029865.1 mouse_genomes_project 5 151697040 151701415 - Lrwd1 protein_coding retained_intron MGP_CBAJ_T0074640.1 MGP_CBAJ_G0029865.1 mouse_genomes_project 5 151697672 151699243 - Lrwd1 protein_coding retained_intron MGP_CBAJ_T0074641.1 MGP_CBAJ_G0029865.1 mouse_genomes_project 5 151698397 151701350 - MGP_CBAJ_P0074641 Lrwd1 protein_coding protein_coding MGP_CBAJ_T0001593.1 MGP_CBAJ_G0001512.1 mouse_genomes_project 5 69925868 69928265 - TEC TEC MGP_CBAJ_T0074526.1 MGP_CBAJ_G0029845.1 mouse_genomes_project 5 150810291 150817136 + MGP_CBAJ_P0074526 Nsun5 protein_coding protein_coding MGP_CBAJ_T0074527.1 MGP_CBAJ_G0029845.1 mouse_genomes_project 5 150810308 150811742 + Nsun5 protein_coding processed_transcript MGP_CBAJ_T0074528.1 MGP_CBAJ_G0029845.1 mouse_genomes_project 5 150810313 150814542 + MGP_CBAJ_P0074528 Nsun5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074529.1 MGP_CBAJ_G0029845.1 mouse_genomes_project 5 150810329 150814403 + MGP_CBAJ_P0074529 Nsun5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074530.1 MGP_CBAJ_G0029845.1 mouse_genomes_project 5 150810915 150812880 + Nsun5 protein_coding retained_intron MGP_CBAJ_T0074531.1 MGP_CBAJ_G0029845.1 mouse_genomes_project 5 150811265 150814422 + Nsun5 protein_coding retained_intron MGP_CBAJ_T0074532.1 MGP_CBAJ_G0029845.1 mouse_genomes_project 5 150811397 150812147 + Nsun5 protein_coding retained_intron MGP_CBAJ_T0074533.1 MGP_CBAJ_G0029845.1 mouse_genomes_project 5 150813979 150817143 + Nsun5 protein_coding retained_intron MGP_CBAJ_T0074534.1 MGP_CBAJ_G0029845.1 mouse_genomes_project 5 150814516 150816481 + Nsun5 protein_coding retained_intron MGP_CBAJ_T0073689.1 MGP_CBAJ_G0029706.1 mouse_genomes_project 5 135728010 135744319 + MGP_CBAJ_P0073689 Ppp1cc protein_coding protein_coding MGP_CBAJ_T0073690.1 MGP_CBAJ_G0029706.1 mouse_genomes_project 5 135728010 135744319 + MGP_CBAJ_P0073690 Ppp1cc protein_coding nonsense_mediated_decay MGP_CBAJ_T0073691.1 MGP_CBAJ_G0029706.1 mouse_genomes_project 5 135728247 135744142 + MGP_CBAJ_P0073691 Ppp1cc protein_coding protein_coding MGP_CBAJ_T0073692.1 MGP_CBAJ_G0029706.1 mouse_genomes_project 5 135728611 135739396 + Ppp1cc protein_coding retained_intron MGP_CBAJ_T0073693.1 MGP_CBAJ_G0029706.1 mouse_genomes_project 5 135738597 135744311 + MGP_CBAJ_P0073693 Ppp1cc protein_coding nonsense_mediated_decay MGP_CBAJ_T0073694.1 MGP_CBAJ_G0029706.1 mouse_genomes_project 5 135741314 135742526 + Ppp1cc protein_coding retained_intron MGP_CBAJ_T0073695.1 MGP_CBAJ_G0029706.1 mouse_genomes_project 5 135741589 135744311 + MGP_CBAJ_P0073695 Ppp1cc protein_coding nonsense_mediated_decay MGP_CBAJ_T0004555.1 MGP_CBAJ_G0003944.1 mouse_genomes_project 5 18105875 18130116 - 4921504A21Rik antisense antisense MGP_CBAJ_T0004556.1 MGP_CBAJ_G0003944.1 mouse_genomes_project 5 18106800 18129729 - 4921504A21Rik antisense antisense MGP_CBAJ_T0001620.1 MGP_CBAJ_G0001539.1 mouse_genomes_project 5 71410120 71412640 + TEC TEC MGP_CBAJ_T0001430.1 MGP_CBAJ_G0001354.1 mouse_genomes_project 5 19812589 19813088 + TEC TEC MGP_CBAJ_T0014761.1 MGP_CBAJ_G0012873.1 mouse_genomes_project 5 58923536 58924341 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001584.1 MGP_CBAJ_G0001504.1 mouse_genomes_project 5 66821725 66825036 - TEC TEC MGP_CBAJ_T0101965.1 MGP_CBAJ_G0039996.1 mouse_genomes_project 5 170215508 170225553 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0001790.1 MGP_CBAJ_G0001707.1 mouse_genomes_project 5 139414836 139417596 - TEC TEC MGP_CBAJ_T0069598.1 MGP_CBAJ_G0028929.1 mouse_genomes_project 5 952182 977922 + Akap9 protein_coding retained_intron MGP_CBAJ_T0069599.1 MGP_CBAJ_G0028929.1 mouse_genomes_project 5 952306 984137 + MGP_CBAJ_P0069599 Akap9 protein_coding protein_coding MGP_CBAJ_T0069600.1 MGP_CBAJ_G0028929.1 mouse_genomes_project 5 952402 972065 + Akap9 protein_coding retained_intron MGP_CBAJ_T0069601.1 MGP_CBAJ_G0028929.1 mouse_genomes_project 5 952402 1095648 + MGP_CBAJ_P0069601 Akap9 protein_coding protein_coding MGP_CBAJ_T0069602.1 MGP_CBAJ_G0028929.1 mouse_genomes_project 5 974395 980812 + Akap9 protein_coding processed_transcript MGP_CBAJ_T0069603.1 MGP_CBAJ_G0028929.1 mouse_genomes_project 5 974406 974987 + Akap9 protein_coding retained_intron MGP_CBAJ_T0069604.1 MGP_CBAJ_G0028929.1 mouse_genomes_project 5 977871 980868 + Akap9 protein_coding retained_intron MGP_CBAJ_T0069605.1 MGP_CBAJ_G0028929.1 mouse_genomes_project 5 994937 1004270 + Akap9 protein_coding retained_intron MGP_CBAJ_T0069606.1 MGP_CBAJ_G0028929.1 mouse_genomes_project 5 998579 999495 + MGP_CBAJ_P0069606 Akap9 protein_coding protein_coding MGP_CBAJ_T0069607.1 MGP_CBAJ_G0028929.1 mouse_genomes_project 5 1049893 1052055 + Akap9 protein_coding retained_intron MGP_CBAJ_T0069608.1 MGP_CBAJ_G0028929.1 mouse_genomes_project 5 1073550 1075226 + Akap9 protein_coding retained_intron MGP_CBAJ_T0069609.1 MGP_CBAJ_G0028929.1 mouse_genomes_project 5 1078671 1079674 + MGP_CBAJ_P0069609 Akap9 protein_coding protein_coding MGP_CBAJ_T0069610.1 MGP_CBAJ_G0028929.1 mouse_genomes_project 5 1078793 1079272 + Akap9 protein_coding retained_intron MGP_CBAJ_T0069611.1 MGP_CBAJ_G0028929.1 mouse_genomes_project 5 1079593 1084792 + MGP_CBAJ_P0069611 Akap9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069612.1 MGP_CBAJ_G0028929.1 mouse_genomes_project 5 1081782 1082252 + Akap9 protein_coding retained_intron MGP_CBAJ_T0070684.1 MGP_CBAJ_G0029121.1 mouse_genomes_project 5 34633468 34717238 + MGP_CBAJ_P0070684 Whsc1 protein_coding protein_coding MGP_CBAJ_T0070685.1 MGP_CBAJ_G0029121.1 mouse_genomes_project 5 34633487 34691724 + MGP_CBAJ_P0070685 Whsc1 protein_coding protein_coding MGP_CBAJ_T0070686.1 MGP_CBAJ_G0029121.1 mouse_genomes_project 5 34633572 34663152 + MGP_CBAJ_P0070686 Whsc1 protein_coding protein_coding MGP_CBAJ_T0070687.1 MGP_CBAJ_G0029121.1 mouse_genomes_project 5 34660081 34717238 + MGP_CBAJ_P0070687 Whsc1 protein_coding protein_coding MGP_CBAJ_T0070688.1 MGP_CBAJ_G0029121.1 mouse_genomes_project 5 34660081 34717247 + MGP_CBAJ_P0070688 Whsc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070689.1 MGP_CBAJ_G0029121.1 mouse_genomes_project 5 34660081 34696499 + MGP_CBAJ_P0070689 Whsc1 protein_coding protein_coding MGP_CBAJ_T0070690.1 MGP_CBAJ_G0029121.1 mouse_genomes_project 5 34660081 34717247 + MGP_CBAJ_P0070690 Whsc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070691.1 MGP_CBAJ_G0029121.1 mouse_genomes_project 5 34660110 34714984 + MGP_CBAJ_P0070691 Whsc1 protein_coding protein_coding MGP_CBAJ_T0070692.1 MGP_CBAJ_G0029121.1 mouse_genomes_project 5 34660165 34714767 + MGP_CBAJ_P0070692 Whsc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070693.1 MGP_CBAJ_G0029121.1 mouse_genomes_project 5 34678194 34696507 + MGP_CBAJ_P0070693 Whsc1 protein_coding protein_coding MGP_CBAJ_T0070694.1 MGP_CBAJ_G0029121.1 mouse_genomes_project 5 34697434 34699296 + Whsc1 protein_coding retained_intron MGP_CBAJ_T0070695.1 MGP_CBAJ_G0029121.1 mouse_genomes_project 5 34698368 34714698 + MGP_CBAJ_P0070695 Whsc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070696.1 MGP_CBAJ_G0029121.1 mouse_genomes_project 5 34704768 34710949 + Whsc1 protein_coding retained_intron MGP_CBAJ_T0070697.1 MGP_CBAJ_G0029121.1 mouse_genomes_project 5 34704782 34706970 + Whsc1 protein_coding retained_intron MGP_CBAJ_T0070698.1 MGP_CBAJ_G0029121.1 mouse_genomes_project 5 34711179 34714367 + Whsc1 protein_coding retained_intron MGP_CBAJ_T0004815.1 MGP_CBAJ_G0004134.1 mouse_genomes_project 5 168729918 168747474 - Gm42556 antisense antisense MGP_CBAJ_T0001651.1 MGP_CBAJ_G0001569.1 mouse_genomes_project 5 78803118 78804111 + TEC TEC MGP_CBAJ_T0099386.1 MGP_CBAJ_G0037641.1 mouse_genomes_project 5 122108513 122108620 + Gm22583 snRNA snRNA MGP_CBAJ_T0001499.1 MGP_CBAJ_G0001420.1 mouse_genomes_project 5 46450329 46451077 - TEC TEC MGP_CBAJ_T0075049.1 MGP_CBAJ_G0029946.1 mouse_genomes_project 5 155718234 155754836 - Adap1 protein_coding processed_transcript MGP_CBAJ_T0075050.1 MGP_CBAJ_G0029946.1 mouse_genomes_project 5 155718234 155773993 - MGP_CBAJ_P0075050 Adap1 protein_coding protein_coding MGP_CBAJ_T0075051.1 MGP_CBAJ_G0029946.1 mouse_genomes_project 5 155719134 155751671 - Adap1 protein_coding processed_transcript MGP_CBAJ_T0075052.1 MGP_CBAJ_G0029946.1 mouse_genomes_project 5 155719216 155754808 - Adap1 protein_coding processed_transcript MGP_CBAJ_T0075053.1 MGP_CBAJ_G0029946.1 mouse_genomes_project 5 155719288 155721000 - Adap1 protein_coding retained_intron MGP_CBAJ_T0075054.1 MGP_CBAJ_G0029946.1 mouse_genomes_project 5 155729537 155756180 - Adap1 protein_coding retained_intron MGP_CBAJ_T0008138.1 MGP_CBAJ_G0006624.1 mouse_genomes_project 5 114404177 114441834 + lincRNA lincRNA MGP_CBAJ_T0008139.1 MGP_CBAJ_G0006624.1 mouse_genomes_project 5 114404311 114419093 + lincRNA lincRNA MGP_CBAJ_T0008140.1 MGP_CBAJ_G0006624.1 mouse_genomes_project 5 114420559 114439510 + lincRNA lincRNA MGP_CBAJ_T0008141.1 MGP_CBAJ_G0006624.1 mouse_genomes_project 5 114421105 114438917 + lincRNA lincRNA MGP_CBAJ_T0008142.1 MGP_CBAJ_G0006624.1 mouse_genomes_project 5 114421147 114441137 + lincRNA lincRNA MGP_CBAJ_T0100601.1 MGP_CBAJ_G0038856.1 mouse_genomes_project 5 21646554 21646668 - Gm25459 snoRNA snoRNA MGP_CBAJ_T0014775.1 MGP_CBAJ_G0012887.1 mouse_genomes_project 5 64485565 64485987 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001591.1 MGP_CBAJ_G0001510.1 mouse_genomes_project 5 69808504 69809691 - TEC TEC MGP_CBAJ_T0010536.1 MGP_CBAJ_G0008674.1 mouse_genomes_project 5 623055 623172 + Gm26238 miRNA miRNA MGP_CBAJ_T0007997.1 MGP_CBAJ_G0006512.1 mouse_genomes_project 5 39017152 39017925 + Gm43763 lincRNA lincRNA MGP_CBAJ_T0011486.1 MGP_CBAJ_G0009624.1 mouse_genomes_project 5 149397527 149397815 + Gm24139 misc_RNA misc_RNA MGP_CBAJ_T0073383.1 MGP_CBAJ_G0029645.1 mouse_genomes_project 5 128768232 128787083 - MGP_CBAJ_P0073383 Srrm4 protein_coding protein_coding MGP_CBAJ_T0073384.1 MGP_CBAJ_G0029645.1 mouse_genomes_project 5 128768242 128787207 - Srrm4 protein_coding retained_intron MGP_CBAJ_T0073385.1 MGP_CBAJ_G0029645.1 mouse_genomes_project 5 128768243 128943232 - MGP_CBAJ_P0073385 Srrm4 protein_coding protein_coding MGP_CBAJ_T0073386.1 MGP_CBAJ_G0029645.1 mouse_genomes_project 5 128795318 128943212 - MGP_CBAJ_P0073386 Srrm4 protein_coding unknown_likely_coding MGP_CBAJ_T0073387.1 MGP_CBAJ_G0029645.1 mouse_genomes_project 5 128809529 128810308 - Srrm4 protein_coding retained_intron MGP_CBAJ_T0072832.1 MGP_CBAJ_G0029542.1 mouse_genomes_project 5 121388325 121408812 + MGP_CBAJ_P0072832 Zfp605 protein_coding protein_coding MGP_CBAJ_T0072833.1 MGP_CBAJ_G0029542.1 mouse_genomes_project 5 121388569 121406478 + Zfp605 protein_coding processed_transcript MGP_CBAJ_T0072834.1 MGP_CBAJ_G0029542.1 mouse_genomes_project 5 121388584 121406436 + MGP_CBAJ_P0072834 Zfp605 protein_coding protein_coding MGP_CBAJ_T0072835.1 MGP_CBAJ_G0029542.1 mouse_genomes_project 5 121390285 121408120 + MGP_CBAJ_P0072835 Zfp605 protein_coding protein_coding MGP_CBAJ_T0071991.1 MGP_CBAJ_G0029342.1 mouse_genomes_project 5 94086390 94132258 - MGP_CBAJ_P0071991 Tmprss11e protein_coding protein_coding MGP_CBAJ_T0010542.1 MGP_CBAJ_G0008680.1 mouse_genomes_project 5 22689217 22689263 - Gm28022 miRNA miRNA MGP_CBAJ_T0001659.1 MGP_CBAJ_G0001577.1 mouse_genomes_project 5 80099665 80101287 - TEC TEC MGP_CBAJ_T0008052.1 MGP_CBAJ_G0006556.1 mouse_genomes_project 5 69086040 69089103 - Gm26761 lincRNA lincRNA MGP_CBAJ_T0069691.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5648792 5957044 - MGP_CBAJ_P0069691 Adam22 protein_coding protein_coding MGP_CBAJ_T0069692.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5648792 5956945 - MGP_CBAJ_P0069692 Adam22 protein_coding protein_coding MGP_CBAJ_T0069693.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5648792 5956945 - MGP_CBAJ_P0069693 Adam22 protein_coding protein_coding MGP_CBAJ_T0069694.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5648792 5956945 - MGP_CBAJ_P0069694 Adam22 protein_coding protein_coding MGP_CBAJ_T0069695.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5648792 5957044 - MGP_CBAJ_P0069695 Adam22 protein_coding protein_coding MGP_CBAJ_T0069696.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5654279 5693808 - MGP_CBAJ_P0069696 Adam22 protein_coding protein_coding MGP_CBAJ_T0069697.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5655125 5689318 - MGP_CBAJ_P0069697 Adam22 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069698.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5655125 5689318 - MGP_CBAJ_P0069698 Adam22 protein_coding protein_coding MGP_CBAJ_T0069699.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5659154 5689318 - MGP_CBAJ_P0069699 Adam22 protein_coding protein_coding MGP_CBAJ_T0069700.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5659154 5689318 - MGP_CBAJ_P0069700 Adam22 protein_coding protein_coding MGP_CBAJ_T0069701.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5659154 5689318 - MGP_CBAJ_P0069701 Adam22 protein_coding protein_coding MGP_CBAJ_T0069702.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5659154 5689318 - MGP_CBAJ_P0069702 Adam22 protein_coding protein_coding MGP_CBAJ_T0069703.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5659154 5689318 - MGP_CBAJ_P0069703 Adam22 protein_coding protein_coding MGP_CBAJ_T0069704.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5659154 5689318 - MGP_CBAJ_P0069704 Adam22 protein_coding protein_coding MGP_CBAJ_T0069705.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5659154 5689318 - MGP_CBAJ_P0069705 Adam22 protein_coding protein_coding MGP_CBAJ_T0069706.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5659154 5689318 - MGP_CBAJ_P0069706 Adam22 protein_coding protein_coding MGP_CBAJ_T0069707.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5659154 5689318 - MGP_CBAJ_P0069707 Adam22 protein_coding protein_coding MGP_CBAJ_T0069708.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5659154 5689318 - MGP_CBAJ_P0069708 Adam22 protein_coding protein_coding MGP_CBAJ_T0069709.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5665544 5667847 - Adam22 protein_coding retained_intron MGP_CBAJ_T0069710.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5669866 5957040 - MGP_CBAJ_P0069710 Adam22 protein_coding protein_coding MGP_CBAJ_T0069711.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5669929 5689318 - MGP_CBAJ_P0069711 Adam22 protein_coding protein_coding MGP_CBAJ_T0069712.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5717060 5957044 - MGP_CBAJ_P0069712 Adam22 protein_coding protein_coding MGP_CBAJ_T0069713.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5796558 5957097 - Adam22 protein_coding processed_transcript MGP_CBAJ_T0069714.1 MGP_CBAJ_G0028943.1 mouse_genomes_project 5 5955907 5957123 - Adam22 protein_coding retained_intron MGP_CBAJ_T0075364.1 MGP_CBAJ_G0030018.1 mouse_genomes_project 5 162002544 162036481 - MGP_CBAJ_P0075364 Tmem130 protein_coding protein_coding MGP_CBAJ_T0075365.1 MGP_CBAJ_G0030018.1 mouse_genomes_project 5 162024252 162036650 - Tmem130 protein_coding processed_transcript MGP_CBAJ_T0073098.1 MGP_CBAJ_G0029592.1 mouse_genomes_project 5 125841302 125917395 - MGP_CBAJ_P0073098 Svop protein_coding protein_coding MGP_CBAJ_T0073099.1 MGP_CBAJ_G0029592.1 mouse_genomes_project 5 125842516 125885339 - Svop protein_coding processed_transcript MGP_CBAJ_T0073100.1 MGP_CBAJ_G0029592.1 mouse_genomes_project 5 125849342 125860041 - Svop protein_coding retained_intron MGP_CBAJ_T0073101.1 MGP_CBAJ_G0029592.1 mouse_genomes_project 5 125870932 125917205 - Svop protein_coding retained_intron MGP_CBAJ_T0073102.1 MGP_CBAJ_G0029592.1 mouse_genomes_project 5 125871693 125917192 - MGP_CBAJ_P0073102 Svop protein_coding protein_coding MGP_CBAJ_T0073741.1 MGP_CBAJ_G0029716.1 mouse_genomes_project 5 136067325 136118835 - MGP_CBAJ_P0073741 Atp2a2 protein_coding unknown_likely_coding MGP_CBAJ_T0073742.1 MGP_CBAJ_G0029716.1 mouse_genomes_project 5 136067326 136119045 - MGP_CBAJ_P0073742 Atp2a2 protein_coding protein_coding MGP_CBAJ_T0073743.1 MGP_CBAJ_G0029716.1 mouse_genomes_project 5 136106046 136118771 - Atp2a2 protein_coding processed_transcript MGP_CBAJ_T0073744.1 MGP_CBAJ_G0029716.1 mouse_genomes_project 5 136106099 136118767 - Atp2a2 protein_coding retained_intron MGP_CBAJ_T0008222.1 MGP_CBAJ_G0006675.1 mouse_genomes_project 5 129010272 129240753 - Gm43122 lincRNA lincRNA MGP_CBAJ_T0008224.1 MGP_CBAJ_G0006675.1 mouse_genomes_project 5 129226876 129240787 - Gm43122 lincRNA lincRNA MGP_CBAJ_T0014684.1 MGP_CBAJ_G0012796.1 mouse_genomes_project 5 23544613 23545139 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001865.1 MGP_CBAJ_G0001781.1 mouse_genomes_project 5 165325915 165326972 + TEC TEC MGP_CBAJ_T0014824.1 MGP_CBAJ_G0012936.1 mouse_genomes_project 5 87482284 87483158 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0073913.1 MGP_CBAJ_G0029740.1 mouse_genomes_project 5 137585870 137610254 - MGP_CBAJ_P0073913 Zcchc8 protein_coding protein_coding MGP_CBAJ_T0073914.1 MGP_CBAJ_G0029740.1 mouse_genomes_project 5 137585870 137610310 - MGP_CBAJ_P0073914 Zcchc8 protein_coding protein_coding MGP_CBAJ_T0073915.1 MGP_CBAJ_G0029740.1 mouse_genomes_project 5 137587256 137590876 - Zcchc8 protein_coding retained_intron MGP_CBAJ_T0073916.1 MGP_CBAJ_G0029740.1 mouse_genomes_project 5 137591939 137608725 - MGP_CBAJ_P0073916 Zcchc8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073917.1 MGP_CBAJ_G0029740.1 mouse_genomes_project 5 137591956 137595901 - Zcchc8 protein_coding retained_intron MGP_CBAJ_T0073918.1 MGP_CBAJ_G0029740.1 mouse_genomes_project 5 137595706 137603252 - MGP_CBAJ_P0073918 Zcchc8 protein_coding protein_coding MGP_CBAJ_T0073919.1 MGP_CBAJ_G0029740.1 mouse_genomes_project 5 137596613 137610033 - MGP_CBAJ_P0073919 Zcchc8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073920.1 MGP_CBAJ_G0029740.1 mouse_genomes_project 5 137598158 137610072 - MGP_CBAJ_P0073920 Zcchc8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073921.1 MGP_CBAJ_G0029740.1 mouse_genomes_project 5 137603260 137609984 - MGP_CBAJ_P0073921 Zcchc8 protein_coding protein_coding MGP_CBAJ_T0001847.1 MGP_CBAJ_G0001763.1 mouse_genomes_project 5 151938738 151943096 - TEC TEC MGP_CBAJ_T0001567.1 MGP_CBAJ_G0001487.1 mouse_genomes_project 5 61275339 61277954 + TEC TEC MGP_CBAJ_T0001724.1 MGP_CBAJ_G0001642.1 mouse_genomes_project 5 123927387 123927754 - TEC TEC MGP_CBAJ_T0071076.1 MGP_CBAJ_G0029183.1 mouse_genomes_project 5 40992311 41148054 - MGP_CBAJ_P0071076 Hs3st1 protein_coding protein_coding MGP_CBAJ_T0071077.1 MGP_CBAJ_G0029183.1 mouse_genomes_project 5 40992315 41027529 - MGP_CBAJ_P0071077 Hs3st1 protein_coding protein_coding MGP_CBAJ_T0071078.1 MGP_CBAJ_G0029183.1 mouse_genomes_project 5 40993145 41028141 - MGP_CBAJ_P0071078 Hs3st1 protein_coding protein_coding MGP_CBAJ_T0071079.1 MGP_CBAJ_G0029183.1 mouse_genomes_project 5 40993450 41027492 - MGP_CBAJ_P0071079 Hs3st1 protein_coding protein_coding MGP_CBAJ_T0004601.1 MGP_CBAJ_G0003980.1 mouse_genomes_project 5 46103774 46108091 + Gm42982 antisense antisense MGP_CBAJ_T0072464.1 MGP_CBAJ_G0029461.1 mouse_genomes_project 5 110254887 110260663 + MGP_CBAJ_P0072464 Mrps18c protein_coding protein_coding MGP_CBAJ_T0072465.1 MGP_CBAJ_G0029461.1 mouse_genomes_project 5 110254939 110255886 + Mrps18c protein_coding retained_intron MGP_CBAJ_T0072466.1 MGP_CBAJ_G0029461.1 mouse_genomes_project 5 110254939 110260670 + MGP_CBAJ_P0072466 Mrps18c protein_coding nonsense_mediated_decay MGP_CBAJ_T0072467.1 MGP_CBAJ_G0029461.1 mouse_genomes_project 5 110254943 110260673 + MGP_CBAJ_P0072467 Mrps18c protein_coding protein_coding MGP_CBAJ_T0072468.1 MGP_CBAJ_G0029461.1 mouse_genomes_project 5 110260111 110260671 + Mrps18c protein_coding retained_intron MGP_CBAJ_T0069919.1 MGP_CBAJ_G0028988.1 mouse_genomes_project 5 21040811 21100241 - MGP_CBAJ_P0069919 Slc26a5 protein_coding protein_coding MGP_CBAJ_T0069920.1 MGP_CBAJ_G0028988.1 mouse_genomes_project 5 21040811 21096652 - MGP_CBAJ_P0069920 Slc26a5 protein_coding protein_coding MGP_CBAJ_T0069921.1 MGP_CBAJ_G0028988.1 mouse_genomes_project 5 21041174 21079197 - MGP_CBAJ_P0069921 Slc26a5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069922.1 MGP_CBAJ_G0028988.1 mouse_genomes_project 5 21041305 21079149 - MGP_CBAJ_P0069922 Slc26a5 protein_coding protein_coding MGP_CBAJ_T0069923.1 MGP_CBAJ_G0028988.1 mouse_genomes_project 5 21048046 21052916 - Slc26a5 protein_coding retained_intron MGP_CBAJ_T0001868.1 MGP_CBAJ_G0001784.1 mouse_genomes_project 5 167665115 167666753 + TEC TEC MGP_CBAJ_T0004581.1 MGP_CBAJ_G0003965.1 mouse_genomes_project 5 35084280 35089204 + Gm42848 antisense antisense MGP_CBAJ_T0004638.1 MGP_CBAJ_G0004011.1 mouse_genomes_project 5 82875575 82876053 + antisense antisense MGP_CBAJ_T0004639.1 MGP_CBAJ_G0004011.1 mouse_genomes_project 5 82875815 82885963 + antisense antisense MGP_CBAJ_T0008006.1 MGP_CBAJ_G0006517.1 mouse_genomes_project 5 40647170 40653314 + Gm43454 lincRNA lincRNA MGP_CBAJ_T0001670.1 MGP_CBAJ_G0001588.1 mouse_genomes_project 5 88832196 88833613 - TEC TEC MGP_CBAJ_T0001658.1 MGP_CBAJ_G0001576.1 mouse_genomes_project 5 80020057 80022808 - TEC TEC MGP_CBAJ_T0001560.1 MGP_CBAJ_G0001480.1 mouse_genomes_project 5 56905987 56911188 + TEC TEC MGP_CBAJ_T0014786.1 MGP_CBAJ_G0012898.1 mouse_genomes_project 5 68535896 68536761 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001798.1 MGP_CBAJ_G0001715.1 mouse_genomes_project 5 142992920 142994332 + TEC TEC MGP_CBAJ_T0004565.1 MGP_CBAJ_G0003952.1 mouse_genomes_project 5 24564950 24567387 + Prkag2os2 antisense antisense MGP_CBAJ_T0014854.1 MGP_CBAJ_G0012966.1 mouse_genomes_project 5 101375261 101375835 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008036.1 MGP_CBAJ_G0006544.1 mouse_genomes_project 5 62105958 62112714 + lincRNA lincRNA MGP_CBAJ_T0001827.1 MGP_CBAJ_G0001744.1 mouse_genomes_project 5 147189459 147191095 - TEC TEC MGP_CBAJ_T0008106.1 MGP_CBAJ_G0006601.1 mouse_genomes_project 5 106128582 106135384 + Gm43146 lincRNA lincRNA MGP_CBAJ_T0004751.1 MGP_CBAJ_G0004087.1 mouse_genomes_project 5 138220632 138228038 + Pitpnm2os1 antisense antisense MGP_CBAJ_T0072225.1 MGP_CBAJ_G0029413.1 mouse_genomes_project 5 100439493 100447427 - MGP_CBAJ_P0072225 U90926 protein_coding protein_coding MGP_CBAJ_T0072226.1 MGP_CBAJ_G0029413.1 mouse_genomes_project 5 100439496 100447427 - MGP_CBAJ_P0072226 U90926 protein_coding protein_coding MGP_CBAJ_T0072227.1 MGP_CBAJ_G0029413.1 mouse_genomes_project 5 100439714 100441951 - U90926 protein_coding retained_intron MGP_CBAJ_T0004640.1 MGP_CBAJ_G0004012.1 mouse_genomes_project 5 83062936 83073410 + Hopxos antisense antisense MGP_CBAJ_T0071982.1 MGP_CBAJ_G0029338.1 mouse_genomes_project 5 93776432 93833588 - MGP_CBAJ_P0071982 Tmprss11a protein_coding protein_coding MGP_CBAJ_T0071983.1 MGP_CBAJ_G0029338.1 mouse_genomes_project 5 93781302 93785148 - Tmprss11a protein_coding retained_intron MGP_CBAJ_T0010607.1 MGP_CBAJ_G0008745.1 mouse_genomes_project 5 154191622 154191710 - Mir93 miRNA miRNA MGP_CBAJ_T0001417.1 MGP_CBAJ_G0001341.1 mouse_genomes_project 5 12343698 12345586 + TEC TEC MGP_CBAJ_T0014759.1 MGP_CBAJ_G0012871.1 mouse_genomes_project 5 58775036 58775742 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0073394.1 MGP_CBAJ_G0029647.1 mouse_genomes_project 5 129568871 129750821 + MGP_CBAJ_P0073394 Taok3 protein_coding protein_coding MGP_CBAJ_T0073395.1 MGP_CBAJ_G0029647.1 mouse_genomes_project 5 129575041 129660141 + MGP_CBAJ_P0073395 Taok3 protein_coding protein_coding MGP_CBAJ_T0073396.1 MGP_CBAJ_G0029647.1 mouse_genomes_project 5 129582297 129652174 + Taok3 protein_coding retained_intron MGP_CBAJ_T0073397.1 MGP_CBAJ_G0029647.1 mouse_genomes_project 5 129582297 129750679 + MGP_CBAJ_P0073397 Taok3 protein_coding protein_coding MGP_CBAJ_T0073398.1 MGP_CBAJ_G0029647.1 mouse_genomes_project 5 129582304 129750823 + MGP_CBAJ_P0073398 Taok3 protein_coding protein_coding MGP_CBAJ_T0073399.1 MGP_CBAJ_G0029647.1 mouse_genomes_project 5 129582324 129705081 + Taok3 protein_coding retained_intron MGP_CBAJ_T0073400.1 MGP_CBAJ_G0029647.1 mouse_genomes_project 5 129582327 129720323 + MGP_CBAJ_P0073400 Taok3 protein_coding protein_coding MGP_CBAJ_T0073401.1 MGP_CBAJ_G0029647.1 mouse_genomes_project 5 129582350 129637699 + Taok3 protein_coding retained_intron MGP_CBAJ_T0073402.1 MGP_CBAJ_G0029647.1 mouse_genomes_project 5 129660122 129688046 + MGP_CBAJ_P0073402 Taok3 protein_coding protein_coding MGP_CBAJ_T0073403.1 MGP_CBAJ_G0029647.1 mouse_genomes_project 5 129704092 129749471 + MGP_CBAJ_P0073403 Taok3 protein_coding protein_coding MGP_CBAJ_T0001663.1 MGP_CBAJ_G0001581.1 mouse_genomes_project 5 81519149 81521472 + TEC TEC MGP_CBAJ_T0075361.1 MGP_CBAJ_G0030016.1 mouse_genomes_project 5 161436522 161542691 - MGP_CBAJ_P0075361 Baiap2l1 protein_coding protein_coding MGP_CBAJ_T0075362.1 MGP_CBAJ_G0030016.1 mouse_genomes_project 5 161459826 161466738 - Baiap2l1 protein_coding processed_transcript MGP_CBAJ_T0070426.1 MGP_CBAJ_G0029082.1 mouse_genomes_project 5 31557328 31562990 + MGP_CBAJ_P0070426 Snx17 protein_coding protein_coding MGP_CBAJ_T0070427.1 MGP_CBAJ_G0029082.1 mouse_genomes_project 5 31557343 31559536 + MGP_CBAJ_P0070427 Snx17 protein_coding protein_coding MGP_CBAJ_T0070428.1 MGP_CBAJ_G0029082.1 mouse_genomes_project 5 31557395 31562984 + MGP_CBAJ_P0070428 Snx17 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070429.1 MGP_CBAJ_G0029082.1 mouse_genomes_project 5 31557407 31562989 + Snx17 protein_coding retained_intron MGP_CBAJ_T0070430.1 MGP_CBAJ_G0029082.1 mouse_genomes_project 5 31557407 31561146 + MGP_CBAJ_P0070430 Snx17 protein_coding protein_coding MGP_CBAJ_T0070431.1 MGP_CBAJ_G0029082.1 mouse_genomes_project 5 31557436 31562990 + MGP_CBAJ_P0070431 Snx17 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070432.1 MGP_CBAJ_G0029082.1 mouse_genomes_project 5 31557955 31563233 + Snx17 protein_coding retained_intron MGP_CBAJ_T0070433.1 MGP_CBAJ_G0029082.1 mouse_genomes_project 5 31558944 31560524 + Snx17 protein_coding retained_intron MGP_CBAJ_T0070434.1 MGP_CBAJ_G0029082.1 mouse_genomes_project 5 31559474 31561340 + Snx17 protein_coding retained_intron MGP_CBAJ_T0070435.1 MGP_CBAJ_G0029082.1 mouse_genomes_project 5 31559932 31561800 + Snx17 protein_coding retained_intron MGP_CBAJ_T0070436.1 MGP_CBAJ_G0029082.1 mouse_genomes_project 5 31560140 31562234 + Snx17 protein_coding processed_transcript MGP_CBAJ_T0001845.1 MGP_CBAJ_G0001761.1 mouse_genomes_project 5 150927372 150929013 - TEC TEC MGP_CBAJ_T0014978.1 MGP_CBAJ_G0013090.1 mouse_genomes_project 5 163444893 163445216 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004729.1 MGP_CBAJ_G0004071.1 mouse_genomes_project 5 133412143 133423668 - Gm27199 antisense antisense MGP_CBAJ_T0001740.1 MGP_CBAJ_G0001658.1 mouse_genomes_project 5 128095329 128097614 + TEC TEC MGP_CBAJ_T0098068.1 MGP_CBAJ_G0036341.1 mouse_genomes_project 5 167545258 167545364 - n-R5s180 rRNA rRNA MGP_CBAJ_T0073515.1 MGP_CBAJ_G0029672.1 mouse_genomes_project 5 133645943 133661712 + MGP_CBAJ_P0073515 Ddx54 protein_coding protein_coding MGP_CBAJ_T0073516.1 MGP_CBAJ_G0029672.1 mouse_genomes_project 5 133646331 133660747 + Ddx54 protein_coding retained_intron MGP_CBAJ_T0073517.1 MGP_CBAJ_G0029672.1 mouse_genomes_project 5 133652031 133654926 + Ddx54 protein_coding retained_intron MGP_CBAJ_T0073518.1 MGP_CBAJ_G0029672.1 mouse_genomes_project 5 133654454 133654925 + Ddx54 protein_coding retained_intron MGP_CBAJ_T0073829.1 MGP_CBAJ_G0029726.1 mouse_genomes_project 5 136803299 136857748 + Tmem120b protein_coding processed_transcript MGP_CBAJ_T0073830.1 MGP_CBAJ_G0029726.1 mouse_genomes_project 5 136812784 136858815 + MGP_CBAJ_P0073830 Tmem120b protein_coding protein_coding MGP_CBAJ_T0073831.1 MGP_CBAJ_G0029726.1 mouse_genomes_project 5 136812834 136856192 + MGP_CBAJ_P0073831 Tmem120b protein_coding nonsense_mediated_decay MGP_CBAJ_T0073832.1 MGP_CBAJ_G0029726.1 mouse_genomes_project 5 136812835 136858075 + MGP_CBAJ_P0073832 Tmem120b protein_coding protein_coding MGP_CBAJ_T0073833.1 MGP_CBAJ_G0029726.1 mouse_genomes_project 5 136812850 136856210 + MGP_CBAJ_P0073833 Tmem120b protein_coding protein_coding MGP_CBAJ_T0073834.1 MGP_CBAJ_G0029726.1 mouse_genomes_project 5 136812860 136843997 + Tmem120b protein_coding retained_intron MGP_CBAJ_T0073835.1 MGP_CBAJ_G0029726.1 mouse_genomes_project 5 136812879 136839792 + Tmem120b protein_coding retained_intron MGP_CBAJ_T0073836.1 MGP_CBAJ_G0029726.1 mouse_genomes_project 5 136839324 136856884 + Tmem120b protein_coding retained_intron MGP_CBAJ_T0014755.1 MGP_CBAJ_G0012867.1 mouse_genomes_project 5 57117929 57119007 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0075489.1 MGP_CBAJ_G0030051.1 mouse_genomes_project 5 164300191 164302198 - Gpr12 protein_coding retained_intron MGP_CBAJ_T0075490.1 MGP_CBAJ_G0030051.1 mouse_genomes_project 5 164300193 164303033 - MGP_CBAJ_P0075490 Gpr12 protein_coding protein_coding MGP_CBAJ_T0075491.1 MGP_CBAJ_G0030051.1 mouse_genomes_project 5 164300545 164302626 - MGP_CBAJ_P0075491 Gpr12 protein_coding protein_coding MGP_CBAJ_T0075492.1 MGP_CBAJ_G0030051.1 mouse_genomes_project 5 164301264 164302613 - MGP_CBAJ_P0075492 Gpr12 protein_coding protein_coding MGP_CBAJ_T0075493.1 MGP_CBAJ_G0030051.1 mouse_genomes_project 5 164301448 164302637 - MGP_CBAJ_P0075493 Gpr12 protein_coding protein_coding MGP_CBAJ_T0014709.1 MGP_CBAJ_G0012821.1 mouse_genomes_project 5 30517872 30518239 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0074253.1 MGP_CBAJ_G0029799.1 mouse_genomes_project 5 144562172 144564914 + MGP_CBAJ_P0074253 Nupr1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0074254.1 MGP_CBAJ_G0029799.1 mouse_genomes_project 5 144562174 144570531 + MGP_CBAJ_P0074254 Nupr1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0074255.1 MGP_CBAJ_G0029799.1 mouse_genomes_project 5 144562200 144564027 + MGP_CBAJ_P0074255 Nupr1l protein_coding protein_coding MGP_CBAJ_T0074256.1 MGP_CBAJ_G0029799.1 mouse_genomes_project 5 144564602 144564914 + Nupr1l protein_coding processed_transcript MGP_CBAJ_T0014846.1 MGP_CBAJ_G0012958.1 mouse_genomes_project 5 98560458 98561029 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001403.1 MGP_CBAJ_G0001327.1 mouse_genomes_project 5 6299599 6303214 + TEC TEC MGP_CBAJ_T0008160.1 MGP_CBAJ_G0006640.1 mouse_genomes_project 5 118882722 118883197 - Gm42517 lincRNA lincRNA MGP_CBAJ_T0004632.1 MGP_CBAJ_G0004006.1 mouse_genomes_project 5 78629090 78629962 + 1700071G01Rik antisense antisense MGP_CBAJ_T0001642.1 MGP_CBAJ_G0001561.1 mouse_genomes_project 5 77892169 77893159 - TEC TEC MGP_CBAJ_T0072350.1 MGP_CBAJ_G0029436.1 mouse_genomes_project 5 105966902 106071209 + MGP_CBAJ_P0072350 Bmp2k protein_coding protein_coding MGP_CBAJ_T0072351.1 MGP_CBAJ_G0029436.1 mouse_genomes_project 5 105966902 106048775 + MGP_CBAJ_P0072351 Bmp2k protein_coding protein_coding MGP_CBAJ_T0014661.1 MGP_CBAJ_G0012773.1 mouse_genomes_project 5 18456453 18458122 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001605.1 MGP_CBAJ_G0001524.1 mouse_genomes_project 5 70465186 70466100 + TEC TEC MGP_CBAJ_T0099406.1 MGP_CBAJ_G0037661.1 mouse_genomes_project 5 158333616 158333723 - Gm24131 snRNA snRNA MGP_CBAJ_T0007985.1 MGP_CBAJ_G0006506.1 mouse_genomes_project 5 34759243 34764855 + lincRNA lincRNA MGP_CBAJ_T0001566.1 MGP_CBAJ_G0001486.1 mouse_genomes_project 5 61172909 61173064 + TEC TEC MGP_CBAJ_T0070018.1 MGP_CBAJ_G0029005.1 mouse_genomes_project 5 24019376 24023819 + MGP_CBAJ_P0070018 Asic3 protein_coding protein_coding MGP_CBAJ_T0070019.1 MGP_CBAJ_G0029005.1 mouse_genomes_project 5 24019435 24023819 + Asic3 protein_coding retained_intron MGP_CBAJ_T0070020.1 MGP_CBAJ_G0029005.1 mouse_genomes_project 5 24019696 24023731 + MGP_CBAJ_P0070020 Asic3 protein_coding protein_coding MGP_CBAJ_T0070021.1 MGP_CBAJ_G0029005.1 mouse_genomes_project 5 24021724 24023819 + Asic3 protein_coding retained_intron MGP_CBAJ_T0070022.1 MGP_CBAJ_G0029005.1 mouse_genomes_project 5 24022561 24023820 + MGP_CBAJ_P0070022 Asic3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0008235.1 MGP_CBAJ_G0006686.1 mouse_genomes_project 5 132494867 132503124 + Gm16063 lincRNA lincRNA MGP_CBAJ_T0072341.1 MGP_CBAJ_G0029435.1 mouse_genomes_project 5 105731565 105756230 + MGP_CBAJ_P0072341 Anxa3 protein_coding protein_coding MGP_CBAJ_T0072342.1 MGP_CBAJ_G0029435.1 mouse_genomes_project 5 105731611 105788120 + MGP_CBAJ_P0072342 Anxa3 protein_coding protein_coding MGP_CBAJ_T0072343.1 MGP_CBAJ_G0029435.1 mouse_genomes_project 5 105731667 105764532 + MGP_CBAJ_P0072343 Anxa3 protein_coding protein_coding MGP_CBAJ_T0072344.1 MGP_CBAJ_G0029435.1 mouse_genomes_project 5 105731726 105765473 + MGP_CBAJ_P0072344 Anxa3 protein_coding protein_coding MGP_CBAJ_T0072345.1 MGP_CBAJ_G0029435.1 mouse_genomes_project 5 105748926 105774370 + Anxa3 protein_coding retained_intron MGP_CBAJ_T0072346.1 MGP_CBAJ_G0029435.1 mouse_genomes_project 5 105756121 105780491 + Anxa3 protein_coding retained_intron MGP_CBAJ_T0072347.1 MGP_CBAJ_G0029435.1 mouse_genomes_project 5 105767494 105770009 + Anxa3 protein_coding retained_intron MGP_CBAJ_T0072348.1 MGP_CBAJ_G0029435.1 mouse_genomes_project 5 105769603 105787836 + Anxa3 protein_coding retained_intron MGP_CBAJ_T0072349.1 MGP_CBAJ_G0029435.1 mouse_genomes_project 5 105784149 105788014 + MGP_CBAJ_P0072349 Anxa3 protein_coding protein_coding MGP_CBAJ_T0008019.1 MGP_CBAJ_G0006528.1 mouse_genomes_project 5 46851346 46865258 + Gm42750 lincRNA lincRNA MGP_CBAJ_T0072958.1 MGP_CBAJ_G0029564.1 mouse_genomes_project 5 123781628 123787631 - MGP_CBAJ_P0072958 Cryba4 protein_coding protein_coding MGP_CBAJ_T0072959.1 MGP_CBAJ_G0029564.1 mouse_genomes_project 5 123781629 123786279 - MGP_CBAJ_P0072959 Cryba4 protein_coding protein_coding MGP_CBAJ_T0072960.1 MGP_CBAJ_G0029564.1 mouse_genomes_project 5 123781668 123786919 - MGP_CBAJ_P0072960 Cryba4 protein_coding protein_coding MGP_CBAJ_T0073219.1 MGP_CBAJ_G0029615.1 mouse_genomes_project 5 126943076 126960778 + MGP_CBAJ_P0073219 Oasl1 protein_coding protein_coding MGP_CBAJ_T0073220.1 MGP_CBAJ_G0029615.1 mouse_genomes_project 5 126943100 126960781 + MGP_CBAJ_P0073220 Oasl1 protein_coding protein_coding MGP_CBAJ_T0073221.1 MGP_CBAJ_G0029615.1 mouse_genomes_project 5 126943258 126955604 + Oasl1 protein_coding processed_transcript MGP_CBAJ_T0073222.1 MGP_CBAJ_G0029615.1 mouse_genomes_project 5 126943271 126955696 + Oasl1 protein_coding processed_transcript MGP_CBAJ_T0073223.1 MGP_CBAJ_G0029615.1 mouse_genomes_project 5 126949675 126953193 + Oasl1 protein_coding retained_intron MGP_CBAJ_T0073224.1 MGP_CBAJ_G0029615.1 mouse_genomes_project 5 126955653 126960553 + Oasl1 protein_coding processed_transcript MGP_CBAJ_T0074299.1 MGP_CBAJ_G0029808.1 mouse_genomes_project 5 144949253 144961775 - MGP_CBAJ_P0074299 Sbds protein_coding protein_coding MGP_CBAJ_T0074300.1 MGP_CBAJ_G0029808.1 mouse_genomes_project 5 144949927 144961650 - MGP_CBAJ_P0074300 Sbds protein_coding nonsense_mediated_decay MGP_CBAJ_T0074301.1 MGP_CBAJ_G0029808.1 mouse_genomes_project 5 144951406 144960333 - MGP_CBAJ_P0074301 Sbds protein_coding protein_coding MGP_CBAJ_T0074302.1 MGP_CBAJ_G0029808.1 mouse_genomes_project 5 144951953 144961737 - Sbds protein_coding processed_transcript MGP_CBAJ_T0074303.1 MGP_CBAJ_G0029808.1 mouse_genomes_project 5 144957121 144961723 - Sbds protein_coding processed_transcript MGP_CBAJ_T0014888.1 MGP_CBAJ_G0013000.1 mouse_genomes_project 5 118489386 118489808 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099367.1 MGP_CBAJ_G0037622.1 mouse_genomes_project 5 90620364 90620486 - Gm25806 snRNA snRNA MGP_CBAJ_T0072901.1 MGP_CBAJ_G0029554.1 mouse_genomes_project 5 122002582 122009628 + MGP_CBAJ_P0072901 Ddx51 protein_coding protein_coding MGP_CBAJ_T0072902.1 MGP_CBAJ_G0029554.1 mouse_genomes_project 5 122002677 122004277 + Ddx51 protein_coding retained_intron MGP_CBAJ_T0072903.1 MGP_CBAJ_G0029554.1 mouse_genomes_project 5 122004268 122005037 + Ddx51 protein_coding retained_intron MGP_CBAJ_T0072904.1 MGP_CBAJ_G0029554.1 mouse_genomes_project 5 122005766 122006242 + Ddx51 protein_coding retained_intron MGP_CBAJ_T0072905.1 MGP_CBAJ_G0029554.1 mouse_genomes_project 5 122005993 122007003 + MGP_CBAJ_P0072905 Ddx51 protein_coding nonsense_mediated_decay MGP_CBAJ_T0014952.1 MGP_CBAJ_G0013064.1 mouse_genomes_project 5 153910623 153911365 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008158.1 MGP_CBAJ_G0006638.1 mouse_genomes_project 5 118876816 118880535 + Gm43082 lincRNA lincRNA MGP_CBAJ_T0071687.1 MGP_CBAJ_G0029287.1 mouse_genomes_project 5 78323796 78398298 + MGP_CBAJ_P0071687 Slain2 protein_coding protein_coding MGP_CBAJ_T0071688.1 MGP_CBAJ_G0029287.1 mouse_genomes_project 5 78323861 78398280 + MGP_CBAJ_P0071688 Slain2 protein_coding protein_coding MGP_CBAJ_T0071689.1 MGP_CBAJ_G0029287.1 mouse_genomes_project 5 78323908 78327978 + Slain2 protein_coding retained_intron MGP_CBAJ_T0071690.1 MGP_CBAJ_G0029287.1 mouse_genomes_project 5 78324160 78373611 + MGP_CBAJ_P0071690 Slain2 protein_coding protein_coding MGP_CBAJ_T0071691.1 MGP_CBAJ_G0029287.1 mouse_genomes_project 5 78361930 78394171 + Slain2 protein_coding retained_intron MGP_CBAJ_T0014736.1 MGP_CBAJ_G0012848.1 mouse_genomes_project 5 43535410 43536302 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0075713.1 MGP_CBAJ_G0030090.1 mouse_genomes_project 5 169634817 170016499 - MGP_CBAJ_P0075713 Gm42906 protein_coding protein_coding MGP_CBAJ_T0001765.1 MGP_CBAJ_G0001683.1 mouse_genomes_project 5 134972761 134974975 + TEC TEC MGP_CBAJ_T0010556.1 MGP_CBAJ_G0008694.1 mouse_genomes_project 5 54862561 54862677 - Mir6417 miRNA miRNA MGP_CBAJ_T0001460.1 MGP_CBAJ_G0001381.1 mouse_genomes_project 5 33047935 33050400 + TEC TEC MGP_CBAJ_T0075008.1 MGP_CBAJ_G0029941.1 mouse_genomes_project 5 155371111 155390127 - MGP_CBAJ_P0075008 Pdgfa protein_coding protein_coding MGP_CBAJ_T0075009.1 MGP_CBAJ_G0029941.1 mouse_genomes_project 5 155371613 155390043 - MGP_CBAJ_P0075009 Pdgfa protein_coding protein_coding MGP_CBAJ_T0075010.1 MGP_CBAJ_G0029941.1 mouse_genomes_project 5 155372039 155390961 - MGP_CBAJ_P0075010 Pdgfa protein_coding protein_coding MGP_CBAJ_T0075011.1 MGP_CBAJ_G0029941.1 mouse_genomes_project 5 155372068 155392244 - MGP_CBAJ_P0075011 Pdgfa protein_coding protein_coding MGP_CBAJ_T0075012.1 MGP_CBAJ_G0029941.1 mouse_genomes_project 5 155372242 155389371 - Pdgfa protein_coding processed_transcript MGP_CBAJ_T0075013.1 MGP_CBAJ_G0029941.1 mouse_genomes_project 5 155381369 155389574 - Pdgfa protein_coding processed_transcript MGP_CBAJ_T0075014.1 MGP_CBAJ_G0029941.1 mouse_genomes_project 5 155383540 155390875 - Pdgfa protein_coding processed_transcript MGP_CBAJ_T0098408.1 MGP_CBAJ_G0036674.1 mouse_genomes_project 5 50311677 50313817 + Gm20475 sense_intronic sense_intronic MGP_CBAJ_T0070335.1 MGP_CBAJ_G0029069.1 mouse_genomes_project 5 31264973 31267607 - MGP_CBAJ_P0070335 Preb protein_coding protein_coding MGP_CBAJ_T0070336.1 MGP_CBAJ_G0029069.1 mouse_genomes_project 5 31265074 31268966 - MGP_CBAJ_P0070336 Preb protein_coding protein_coding MGP_CBAJ_T0070337.1 MGP_CBAJ_G0029069.1 mouse_genomes_project 5 31265342 31266953 - Preb protein_coding processed_transcript MGP_CBAJ_T0070338.1 MGP_CBAJ_G0029069.1 mouse_genomes_project 5 31265468 31266159 - Preb protein_coding retained_intron MGP_CBAJ_T0070339.1 MGP_CBAJ_G0029069.1 mouse_genomes_project 5 31265907 31267530 - Preb protein_coding retained_intron MGP_CBAJ_T0070340.1 MGP_CBAJ_G0029069.1 mouse_genomes_project 5 31266841 31267528 - Preb protein_coding retained_intron MGP_CBAJ_T0070341.1 MGP_CBAJ_G0029069.1 mouse_genomes_project 5 31266989 31268092 - Preb protein_coding retained_intron MGP_CBAJ_T0070342.1 MGP_CBAJ_G0029069.1 mouse_genomes_project 5 31267576 31269131 - Preb protein_coding processed_transcript MGP_CBAJ_T0070343.1 MGP_CBAJ_G0029069.1 mouse_genomes_project 5 31267746 31268416 - Preb protein_coding processed_transcript MGP_CBAJ_T0070344.1 MGP_CBAJ_G0029069.1 mouse_genomes_project 5 31267804 31269113 - Preb protein_coding retained_intron MGP_CBAJ_T0070345.1 MGP_CBAJ_G0029069.1 mouse_genomes_project 5 31268226 31269123 - Preb protein_coding processed_transcript MGP_CBAJ_T0014893.1 MGP_CBAJ_G0013005.1 mouse_genomes_project 5 119640882 119641256 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099376.1 MGP_CBAJ_G0037631.1 mouse_genomes_project 5 105859468 105859663 + Gm24623 snRNA snRNA MGP_CBAJ_T0014801.1 MGP_CBAJ_G0012913.1 mouse_genomes_project 5 77458831 77459302 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0070736.1 MGP_CBAJ_G0029130.1 mouse_genomes_project 5 35212723 35230175 + MGP_CBAJ_P0070736 Rnf4 protein_coding protein_coding MGP_CBAJ_T0070737.1 MGP_CBAJ_G0029130.1 mouse_genomes_project 5 35212762 35227111 + Rnf4 protein_coding retained_intron MGP_CBAJ_T0070738.1 MGP_CBAJ_G0029130.1 mouse_genomes_project 5 35212814 35230172 + MGP_CBAJ_P0070738 Rnf4 protein_coding protein_coding MGP_CBAJ_T0070739.1 MGP_CBAJ_G0029130.1 mouse_genomes_project 5 35212824 35226617 + Rnf4 protein_coding processed_transcript MGP_CBAJ_T0070740.1 MGP_CBAJ_G0029130.1 mouse_genomes_project 5 35212851 35223718 + Rnf4 protein_coding retained_intron MGP_CBAJ_T0070741.1 MGP_CBAJ_G0029130.1 mouse_genomes_project 5 35212853 35219145 + Rnf4 protein_coding processed_transcript MGP_CBAJ_T0070742.1 MGP_CBAJ_G0029130.1 mouse_genomes_project 5 35212858 35224010 + Rnf4 protein_coding retained_intron MGP_CBAJ_T0070743.1 MGP_CBAJ_G0029130.1 mouse_genomes_project 5 35212880 35226452 + Rnf4 protein_coding retained_intron MGP_CBAJ_T0070744.1 MGP_CBAJ_G0029130.1 mouse_genomes_project 5 35213119 35226614 + MGP_CBAJ_P0070744 Rnf4 protein_coding protein_coding MGP_CBAJ_T0070745.1 MGP_CBAJ_G0029130.1 mouse_genomes_project 5 35213366 35230160 + MGP_CBAJ_P0070745 Rnf4 protein_coding protein_coding MGP_CBAJ_T0070746.1 MGP_CBAJ_G0029130.1 mouse_genomes_project 5 35213753 35219181 + Rnf4 protein_coding processed_transcript MGP_CBAJ_T0070747.1 MGP_CBAJ_G0029130.1 mouse_genomes_project 5 35227738 35232484 + Rnf4 protein_coding retained_intron MGP_CBAJ_T0001706.1 MGP_CBAJ_G0001624.1 mouse_genomes_project 5 115578678 115580850 + TEC TEC MGP_CBAJ_T0008187.1 MGP_CBAJ_G0006653.1 mouse_genomes_project 5 123430886 123444664 - lincRNA lincRNA MGP_CBAJ_T0070054.1 MGP_CBAJ_G0029009.1 mouse_genomes_project 5 24054368 24056765 - MGP_CBAJ_P0070054 Tmub1 protein_coding protein_coding MGP_CBAJ_T0070055.1 MGP_CBAJ_G0029009.1 mouse_genomes_project 5 24054376 24056536 - MGP_CBAJ_P0070055 Tmub1 protein_coding protein_coding MGP_CBAJ_T0070056.1 MGP_CBAJ_G0029009.1 mouse_genomes_project 5 24054376 24056228 - MGP_CBAJ_P0070056 Tmub1 protein_coding protein_coding MGP_CBAJ_T0070057.1 MGP_CBAJ_G0029009.1 mouse_genomes_project 5 24054959 24056498 - MGP_CBAJ_P0070057 Tmub1 protein_coding protein_coding MGP_CBAJ_T0070058.1 MGP_CBAJ_G0029009.1 mouse_genomes_project 5 24055463 24056702 - MGP_CBAJ_P0070058 Tmub1 protein_coding protein_coding MGP_CBAJ_T0008240.1 MGP_CBAJ_G0006690.1 mouse_genomes_project 5 132748886 132752356 - Gm43050 lincRNA lincRNA MGP_CBAJ_T0008241.1 MGP_CBAJ_G0006690.1 mouse_genomes_project 5 132751465 132752227 - Gm43050 lincRNA lincRNA MGP_CBAJ_T0001553.1 MGP_CBAJ_G0001473.1 mouse_genomes_project 5 54599696 54600925 - TEC TEC MGP_CBAJ_T0011474.1 MGP_CBAJ_G0009612.1 mouse_genomes_project 5 109827103 109827282 + Gm27286 misc_RNA misc_RNA MGP_CBAJ_T0014988.1 MGP_CBAJ_G0013100.1 mouse_genomes_project 5 165303142 165303602 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001540.1 MGP_CBAJ_G0001460.1 mouse_genomes_project 5 51640198 51640586 - TEC TEC MGP_CBAJ_T0072203.1 MGP_CBAJ_G0029410.1 mouse_genomes_project 5 100196627 100236744 - MGP_CBAJ_P0072203 Cdkl2 protein_coding protein_coding MGP_CBAJ_T0072204.1 MGP_CBAJ_G0029410.1 mouse_genomes_project 5 100196627 100236745 - MGP_CBAJ_P0072204 Cdkl2 protein_coding protein_coding MGP_CBAJ_T0072205.1 MGP_CBAJ_G0029410.1 mouse_genomes_project 5 100198357 100236399 - MGP_CBAJ_P0072205 Cdkl2 protein_coding protein_coding MGP_CBAJ_T0072206.1 MGP_CBAJ_G0029410.1 mouse_genomes_project 5 100198376 100236375 - MGP_CBAJ_P0072206 Cdkl2 protein_coding protein_coding MGP_CBAJ_T0072207.1 MGP_CBAJ_G0029410.1 mouse_genomes_project 5 100198589 100208965 - Cdkl2 protein_coding retained_intron MGP_CBAJ_T0072208.1 MGP_CBAJ_G0029410.1 mouse_genomes_project 5 100213306 100224758 - MGP_CBAJ_P0072208 Cdkl2 protein_coding protein_coding MGP_CBAJ_T0072209.1 MGP_CBAJ_G0029410.1 mouse_genomes_project 5 100235969 100237591 - Cdkl2 protein_coding TEC MGP_CBAJ_T0017941.1 MGP_CBAJ_G0015357.1 mouse_genomes_project 5 155573299 155576417 - Gm15672 processed_transcript processed_transcript MGP_CBAJ_T0014795.1 MGP_CBAJ_G0012907.1 mouse_genomes_project 5 72250416 72250708 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0075434.1 MGP_CBAJ_G0030029.1 mouse_genomes_project 5 162557317 162564055 - MGP_CBAJ_P0075434 Zkscan14 protein_coding protein_coding MGP_CBAJ_T0075435.1 MGP_CBAJ_G0030029.1 mouse_genomes_project 5 162557994 162564044 - MGP_CBAJ_P0075435 Zkscan14 protein_coding protein_coding MGP_CBAJ_T0075436.1 MGP_CBAJ_G0030029.1 mouse_genomes_project 5 162561816 162564055 - MGP_CBAJ_P0075436 Zkscan14 protein_coding protein_coding MGP_CBAJ_T0001727.1 MGP_CBAJ_G0001645.1 mouse_genomes_project 5 124799070 124800967 - TEC TEC MGP_CBAJ_T0001636.1 MGP_CBAJ_G0001555.1 mouse_genomes_project 5 74253119 74257974 - TEC TEC MGP_CBAJ_T0001587.1 MGP_CBAJ_G0001506.1 mouse_genomes_project 5 68591158 68593473 + TEC TEC MGP_CBAJ_T0099396.1 MGP_CBAJ_G0037651.1 mouse_genomes_project 5 137490305 137490452 + Gm24840 snRNA snRNA MGP_CBAJ_T0098065.1 MGP_CBAJ_G0036338.1 mouse_genomes_project 5 146524210 146524333 + Gm27266 rRNA rRNA MGP_CBAJ_T0008051.1 MGP_CBAJ_G0006555.1 mouse_genomes_project 5 69024496 69026189 + Gm42565 lincRNA lincRNA MGP_CBAJ_T0008289.1 MGP_CBAJ_G0006719.1 mouse_genomes_project 5 142916628 142917501 + Gm42500 lincRNA lincRNA MGP_CBAJ_T0014732.1 MGP_CBAJ_G0012844.1 mouse_genomes_project 5 40679031 40679488 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001466.1 MGP_CBAJ_G0001387.1 mouse_genomes_project 5 34441431 34442586 + TEC TEC MGP_CBAJ_T0098397.1 MGP_CBAJ_G0036663.1 mouse_genomes_project 5 2005101 2006833 - Gm43113 sense_intronic sense_intronic MGP_CBAJ_T0008368.1 MGP_CBAJ_G0006776.1 mouse_genomes_project 5 168187223 168196975 - Gm21221 lincRNA lincRNA MGP_CBAJ_T0073594.1 MGP_CBAJ_G0029694.1 mouse_genomes_project 5 134872877 134913033 - MGP_CBAJ_P0073594 Gm42878 protein_coding protein_coding MGP_CBAJ_T0073595.1 MGP_CBAJ_G0029694.1 mouse_genomes_project 5 134872877 134913033 - MGP_CBAJ_P0073595 Gm42878 protein_coding nonsense_mediated_decay MGP_CBAJ_T0001413.1 MGP_CBAJ_G0001337.1 mouse_genomes_project 5 11749039 11751750 + TEC TEC MGP_CBAJ_T0001401.1 MGP_CBAJ_G0001325.1 mouse_genomes_project 5 5916367 5918431 - TEC TEC MGP_CBAJ_T0072074.1 MGP_CBAJ_G0029367.1 mouse_genomes_project 5 95561035 95567405 + MGP_CBAJ_P0072074 Smr3a protein_coding protein_coding MGP_CBAJ_T0072075.1 MGP_CBAJ_G0029367.1 mouse_genomes_project 5 95561039 95567408 + MGP_CBAJ_P0072075 Smr3a protein_coding protein_coding MGP_CBAJ_T0010593.1 MGP_CBAJ_G0008731.1 mouse_genomes_project 5 139602690 139602767 + Gm27551 miRNA miRNA MGP_CBAJ_T0014918.1 MGP_CBAJ_G0013030.1 mouse_genomes_project 5 127668485 127668986 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014690.1 MGP_CBAJ_G0012802.1 mouse_genomes_project 5 25135488 25135765 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0075397.1 MGP_CBAJ_G0030023.1 mouse_genomes_project 5 162471221 162486761 + MGP_CBAJ_P0075397 Arpc1b protein_coding protein_coding MGP_CBAJ_T0075398.1 MGP_CBAJ_G0030023.1 mouse_genomes_project 5 162471264 162479727 + Arpc1b protein_coding processed_transcript MGP_CBAJ_T0075399.1 MGP_CBAJ_G0030023.1 mouse_genomes_project 5 162471307 162481187 + Arpc1b protein_coding retained_intron MGP_CBAJ_T0075400.1 MGP_CBAJ_G0030023.1 mouse_genomes_project 5 162471318 162485003 + MGP_CBAJ_P0075400 Arpc1b protein_coding protein_coding MGP_CBAJ_T0075401.1 MGP_CBAJ_G0030023.1 mouse_genomes_project 5 162471322 162479571 + MGP_CBAJ_P0075401 Arpc1b protein_coding protein_coding MGP_CBAJ_T0075402.1 MGP_CBAJ_G0030023.1 mouse_genomes_project 5 162480610 162483718 + MGP_CBAJ_P0075402 Arpc1b protein_coding protein_coding MGP_CBAJ_T0075403.1 MGP_CBAJ_G0030023.1 mouse_genomes_project 5 162480905 162482638 + Arpc1b protein_coding retained_intron MGP_CBAJ_T0075404.1 MGP_CBAJ_G0030023.1 mouse_genomes_project 5 162480905 162483864 + Arpc1b protein_coding processed_transcript MGP_CBAJ_T0075405.1 MGP_CBAJ_G0030023.1 mouse_genomes_project 5 162482822 162484260 + Arpc1b protein_coding retained_intron MGP_CBAJ_T0075406.1 MGP_CBAJ_G0030023.1 mouse_genomes_project 5 162483689 162488005 + MGP_CBAJ_P0075406 Arpc1b protein_coding protein_coding MGP_CBAJ_T0075407.1 MGP_CBAJ_G0030023.1 mouse_genomes_project 5 162484152 162485004 + Arpc1b protein_coding retained_intron MGP_CBAJ_T0072853.1 MGP_CBAJ_G0029545.1 mouse_genomes_project 5 121524415 121550043 + MGP_CBAJ_P0072853 Ankle2 protein_coding protein_coding MGP_CBAJ_T0072854.1 MGP_CBAJ_G0029545.1 mouse_genomes_project 5 121524415 121548858 + MGP_CBAJ_P0072854 Ankle2 protein_coding protein_coding MGP_CBAJ_T0072855.1 MGP_CBAJ_G0029545.1 mouse_genomes_project 5 121524452 121550039 + MGP_CBAJ_P0072855 Ankle2 protein_coding protein_coding MGP_CBAJ_T0072856.1 MGP_CBAJ_G0029545.1 mouse_genomes_project 5 121524574 121531590 + Ankle2 protein_coding retained_intron MGP_CBAJ_T0072857.1 MGP_CBAJ_G0029545.1 mouse_genomes_project 5 121530930 121531672 + Ankle2 protein_coding retained_intron MGP_CBAJ_T0072858.1 MGP_CBAJ_G0029545.1 mouse_genomes_project 5 121544142 121546454 + Ankle2 protein_coding processed_transcript MGP_CBAJ_T0008301.1 MGP_CBAJ_G0006724.1 mouse_genomes_project 5 147553728 147554889 + Gm28616 lincRNA lincRNA MGP_CBAJ_T0075691.1 MGP_CBAJ_G0030086.1 mouse_genomes_project 5 169106111 169145585 - N4bp2l2 protein_coding processed_transcript MGP_CBAJ_T0075692.1 MGP_CBAJ_G0030086.1 mouse_genomes_project 5 169134051 169165410 - MGP_CBAJ_P0075692 N4bp2l2 protein_coding protein_coding MGP_CBAJ_T0075693.1 MGP_CBAJ_G0030086.1 mouse_genomes_project 5 169138815 169146327 - N4bp2l2 protein_coding retained_intron MGP_CBAJ_T0075694.1 MGP_CBAJ_G0030086.1 mouse_genomes_project 5 169141079 169159715 - MGP_CBAJ_P0075694 N4bp2l2 protein_coding protein_coding MGP_CBAJ_T0075695.1 MGP_CBAJ_G0030086.1 mouse_genomes_project 5 169141092 169145859 - N4bp2l2 protein_coding retained_intron MGP_CBAJ_T0075696.1 MGP_CBAJ_G0030086.1 mouse_genomes_project 5 169146275 169165375 - N4bp2l2 protein_coding retained_intron MGP_CBAJ_T0075697.1 MGP_CBAJ_G0030086.1 mouse_genomes_project 5 169160644 169165149 - MGP_CBAJ_P0075697 N4bp2l2 protein_coding protein_coding MGP_CBAJ_T0075698.1 MGP_CBAJ_G0030086.1 mouse_genomes_project 5 169164977 169165981 - N4bp2l2 protein_coding retained_intron MGP_CBAJ_T0073873.1 MGP_CBAJ_G0029733.1 mouse_genomes_project 5 137232556 137300618 + MGP_CBAJ_P0073873 Mlxip protein_coding protein_coding MGP_CBAJ_T0073874.1 MGP_CBAJ_G0029733.1 mouse_genomes_project 5 137232558 137311644 + MGP_CBAJ_P0073874 Mlxip protein_coding protein_coding MGP_CBAJ_T0073875.1 MGP_CBAJ_G0029733.1 mouse_genomes_project 5 137296959 137311641 + MGP_CBAJ_P0073875 Mlxip protein_coding nonsense_mediated_decay MGP_CBAJ_T0073876.1 MGP_CBAJ_G0029733.1 mouse_genomes_project 5 137305167 137307263 + Mlxip protein_coding processed_transcript MGP_CBAJ_T0001759.1 MGP_CBAJ_G0001677.1 mouse_genomes_project 5 133569161 133570146 - TEC TEC MGP_CBAJ_T0001456.1 MGP_CBAJ_G0001378.1 mouse_genomes_project 5 32212058 32212290 + TEC TEC MGP_CBAJ_T0004776.1 MGP_CBAJ_G0004106.1 mouse_genomes_project 5 150518507 150519391 - Gm43500 antisense antisense MGP_CBAJ_T0074962.1 MGP_CBAJ_G0029931.1 mouse_genomes_project 5 154464630 154472613 - MGP_CBAJ_P0074962 Gal3st4 protein_coding protein_coding MGP_CBAJ_T0074963.1 MGP_CBAJ_G0029931.1 mouse_genomes_project 5 154464634 154472527 - MGP_CBAJ_P0074963 Gal3st4 protein_coding protein_coding MGP_CBAJ_T0074964.1 MGP_CBAJ_G0029931.1 mouse_genomes_project 5 154464647 154472574 - Gal3st4 protein_coding processed_transcript MGP_CBAJ_T0074965.1 MGP_CBAJ_G0029931.1 mouse_genomes_project 5 154464647 154472574 - MGP_CBAJ_P0074965 Gal3st4 protein_coding protein_coding MGP_CBAJ_T0074967.1 MGP_CBAJ_G0029931.1 mouse_genomes_project 5 154470765 154472522 - MGP_CBAJ_P0074967 Gal3st4 protein_coding protein_coding MGP_CBAJ_T0070512.1 MGP_CBAJ_G0029094.1 mouse_genomes_project 5 31993073 32006772 - MGP_CBAJ_P0070512 Supt7l protein_coding protein_coding MGP_CBAJ_T0070513.1 MGP_CBAJ_G0029094.1 mouse_genomes_project 5 31993905 32006861 - MGP_CBAJ_P0070513 Supt7l protein_coding protein_coding MGP_CBAJ_T0070514.1 MGP_CBAJ_G0029094.1 mouse_genomes_project 5 32001680 32007937 - Supt7l protein_coding retained_intron MGP_CBAJ_T0070515.1 MGP_CBAJ_G0029094.1 mouse_genomes_project 5 32005586 32006832 - Supt7l protein_coding retained_intron MGP_CBAJ_T0098212.1 MGP_CBAJ_G0036485.1 mouse_genomes_project 5 150438813 150438942 - Gm25492 scaRNA scaRNA MGP_CBAJ_T0071001.1 MGP_CBAJ_G0029171.1 mouse_genomes_project 5 39033977 39038055 - MGP_CBAJ_P0071001 Msx1 protein_coding protein_coding MGP_CBAJ_T0071002.1 MGP_CBAJ_G0029171.1 mouse_genomes_project 5 39036195 39038054 - Msx1 protein_coding retained_intron MGP_CBAJ_T0010582.1 MGP_CBAJ_G0008720.1 mouse_genomes_project 5 126308259 126308331 + Mir7027 miRNA miRNA MGP_CBAJ_T0099364.1 MGP_CBAJ_G0037619.1 mouse_genomes_project 5 86572311 86572418 + Gm24304 snRNA snRNA MGP_CBAJ_T0100613.1 MGP_CBAJ_G0038868.1 mouse_genomes_project 5 68315568 68315700 - Gm25608 snoRNA snoRNA MGP_CBAJ_T0001480.1 MGP_CBAJ_G0001401.1 mouse_genomes_project 5 40799962 40801534 - TEC TEC MGP_CBAJ_T0011470.1 MGP_CBAJ_G0009608.1 mouse_genomes_project 5 100167750 100168026 + Gm24113 misc_RNA misc_RNA MGP_CBAJ_T0071348.1 MGP_CBAJ_G0029231.1 mouse_genomes_project 5 67918553 68080958 + Nwd2 protein_coding retained_intron MGP_CBAJ_T0071349.1 MGP_CBAJ_G0029231.1 mouse_genomes_project 5 67918559 68103848 + MGP_CBAJ_P0071349 Nwd2 protein_coding protein_coding MGP_CBAJ_T0071350.1 MGP_CBAJ_G0029231.1 mouse_genomes_project 5 67918784 68093961 + MGP_CBAJ_P0071350 Nwd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071351.1 MGP_CBAJ_G0029231.1 mouse_genomes_project 5 68093775 68103848 + MGP_CBAJ_P0071351 Nwd2 protein_coding protein_coding MGP_CBAJ_T0001735.1 MGP_CBAJ_G0001653.1 mouse_genomes_project 5 126823665 126838365 - TEC TEC MGP_CBAJ_T0010538.1 MGP_CBAJ_G0008676.1 mouse_genomes_project 5 1978293 1978381 + Gm44483 miRNA miRNA MGP_CBAJ_T0004617.1 MGP_CBAJ_G0003993.1 mouse_genomes_project 5 70137669 70144503 - antisense antisense MGP_CBAJ_T0008203.1 MGP_CBAJ_G0006662.1 mouse_genomes_project 5 124826629 124835653 + Gm43095 lincRNA lincRNA MGP_CBAJ_T0014822.1 MGP_CBAJ_G0012934.1 mouse_genomes_project 5 85800765 85800783 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101130.1 MGP_CBAJ_G0039323.1 mouse_genomes_project 5 47862655 47863534 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0069985.1 MGP_CBAJ_G0028998.1 mouse_genomes_project 5 23430684 23438344 - Fam126a protein_coding processed_transcript MGP_CBAJ_T0069986.1 MGP_CBAJ_G0028998.1 mouse_genomes_project 5 23430685 23574124 - MGP_CBAJ_P0069986 Fam126a protein_coding protein_coding MGP_CBAJ_T0069987.1 MGP_CBAJ_G0028998.1 mouse_genomes_project 5 23488817 23574502 - MGP_CBAJ_P0069987 Fam126a protein_coding protein_coding MGP_CBAJ_T0069988.1 MGP_CBAJ_G0028998.1 mouse_genomes_project 5 23492356 23574460 - MGP_CBAJ_P0069988 Fam126a protein_coding protein_coding MGP_CBAJ_T0069989.1 MGP_CBAJ_G0028998.1 mouse_genomes_project 5 23492358 23534785 - MGP_CBAJ_P0069989 Fam126a protein_coding protein_coding MGP_CBAJ_T0069990.1 MGP_CBAJ_G0028998.1 mouse_genomes_project 5 23514404 23517529 - Fam126a protein_coding retained_intron MGP_CBAJ_T0069991.1 MGP_CBAJ_G0028998.1 mouse_genomes_project 5 23521361 23574117 - Fam126a protein_coding processed_transcript MGP_CBAJ_T0001818.1 MGP_CBAJ_G0001735.1 mouse_genomes_project 5 146859767 146862728 - TEC TEC MGP_CBAJ_T0073159.1 MGP_CBAJ_G0029603.1 mouse_genomes_project 5 126506582 126559491 + MGP_CBAJ_P0073159 Fam222a protein_coding protein_coding MGP_CBAJ_T0073160.1 MGP_CBAJ_G0029603.1 mouse_genomes_project 5 126506583 126536636 + Fam222a protein_coding processed_transcript MGP_CBAJ_T0100644.1 MGP_CBAJ_G0038899.1 mouse_genomes_project 5 165042594 165042724 - Gm24556 snoRNA snoRNA MGP_CBAJ_T0072170.1 MGP_CBAJ_G0029396.1 mouse_genomes_project 5 98803502 98805046 + MGP_CBAJ_P0072170 Ppbp protein_coding protein_coding MGP_CBAJ_T0014998.1 MGP_CBAJ_G0013110.1 mouse_genomes_project 5 168925220 168925786 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0069841.1 MGP_CBAJ_G0028970.1 mouse_genomes_project 5 16709022 16774361 + MGP_CBAJ_P0069841 Gnat3 protein_coding protein_coding MGP_CBAJ_T0001556.1 MGP_CBAJ_G0001476.1 mouse_genomes_project 5 54866244 54869219 - TEC TEC MGP_CBAJ_T0075090.1 MGP_CBAJ_G0029956.1 mouse_genomes_project 5 156307969 156332146 - MGP_CBAJ_P0075090 Ints1 protein_coding protein_coding MGP_CBAJ_T0075091.1 MGP_CBAJ_G0029956.1 mouse_genomes_project 5 156307972 156311546 - Ints1 protein_coding retained_intron MGP_CBAJ_T0075092.1 MGP_CBAJ_G0029956.1 mouse_genomes_project 5 156307972 156332111 - MGP_CBAJ_P0075092 Ints1 protein_coding protein_coding MGP_CBAJ_T0075093.1 MGP_CBAJ_G0029956.1 mouse_genomes_project 5 156307973 156311666 - MGP_CBAJ_P0075093 Ints1 protein_coding protein_coding MGP_CBAJ_T0075094.1 MGP_CBAJ_G0029956.1 mouse_genomes_project 5 156318274 156319183 - Ints1 protein_coding retained_intron MGP_CBAJ_T0075095.1 MGP_CBAJ_G0029956.1 mouse_genomes_project 5 156321771 156324586 - Ints1 protein_coding retained_intron MGP_CBAJ_T0075096.1 MGP_CBAJ_G0029956.1 mouse_genomes_project 5 156323785 156332147 - Ints1 protein_coding retained_intron MGP_CBAJ_T0075097.1 MGP_CBAJ_G0029956.1 mouse_genomes_project 5 156324111 156325142 - Ints1 protein_coding retained_intron MGP_CBAJ_T0075098.1 MGP_CBAJ_G0029956.1 mouse_genomes_project 5 156326058 156328416 - Ints1 protein_coding retained_intron MGP_CBAJ_T0075099.1 MGP_CBAJ_G0029956.1 mouse_genomes_project 5 156329302 156332147 - MGP_CBAJ_P0075099 Ints1 protein_coding protein_coding MGP_CBAJ_T0069654.1 MGP_CBAJ_G0028936.1 mouse_genomes_project 5 2852289 2946038 - MGP_CBAJ_P0069654 Cfap69 protein_coding protein_coding MGP_CBAJ_T0069655.1 MGP_CBAJ_G0028936.1 mouse_genomes_project 5 2852293 2946007 - MGP_CBAJ_P0069655 Cfap69 protein_coding protein_coding MGP_CBAJ_T0069656.1 MGP_CBAJ_G0028936.1 mouse_genomes_project 5 2853993 2905392 - Cfap69 protein_coding processed_transcript MGP_CBAJ_T0069657.1 MGP_CBAJ_G0028936.1 mouse_genomes_project 5 2854049 2855513 - MGP_CBAJ_P0069657 Cfap69 protein_coding protein_coding MGP_CBAJ_T0069658.1 MGP_CBAJ_G0028936.1 mouse_genomes_project 5 2854139 2860221 - MGP_CBAJ_P0069658 Cfap69 protein_coding protein_coding MGP_CBAJ_T0069659.1 MGP_CBAJ_G0028936.1 mouse_genomes_project 5 2854182 2898368 - MGP_CBAJ_P0069659 Cfap69 protein_coding protein_coding MGP_CBAJ_T0069660.1 MGP_CBAJ_G0028936.1 mouse_genomes_project 5 2859365 2945842 - MGP_CBAJ_P0069660 Cfap69 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069661.1 MGP_CBAJ_G0028936.1 mouse_genomes_project 5 2862184 2946007 - MGP_CBAJ_P0069661 Cfap69 protein_coding protein_coding MGP_CBAJ_T0069662.1 MGP_CBAJ_G0028936.1 mouse_genomes_project 5 2866653 2946031 - MGP_CBAJ_P0069662 Cfap69 protein_coding protein_coding MGP_CBAJ_T0069663.1 MGP_CBAJ_G0028936.1 mouse_genomes_project 5 2908929 2909303 - Cfap69 protein_coding retained_intron MGP_CBAJ_T0069664.1 MGP_CBAJ_G0028936.1 mouse_genomes_project 5 2928374 2946026 - Cfap69 protein_coding retained_intron MGP_CBAJ_T0069665.1 MGP_CBAJ_G0028936.1 mouse_genomes_project 5 2931352 2945051 - MGP_CBAJ_P0069665 Cfap69 protein_coding protein_coding MGP_CBAJ_T0008237.1 MGP_CBAJ_G0006688.1 mouse_genomes_project 5 132561719 132570701 - Tbx3os2 lincRNA lincRNA MGP_CBAJ_T0098057.1 MGP_CBAJ_G0036330.1 mouse_genomes_project 5 69619156 69619275 + Gm25154 rRNA rRNA MGP_CBAJ_T0069827.1 MGP_CBAJ_G0028965.1 mouse_genomes_project 5 16154074 16162049 + MGP_CBAJ_P0069827 protein_coding protein_coding MGP_CBAJ_T0072701.1 MGP_CBAJ_G0029512.1 mouse_genomes_project 5 118228529 118230207 + MGP_CBAJ_P0072701 Ube2d2b protein_coding protein_coding MGP_CBAJ_T0010597.1 MGP_CBAJ_G0008735.1 mouse_genomes_project 5 150825190 150825271 - Mir7033 miRNA miRNA MGP_CBAJ_T0071692.1 MGP_CBAJ_G0029288.1 mouse_genomes_project 5 78385273 78394171 - MGP_CBAJ_P0071692 Gm10135 protein_coding protein_coding MGP_CBAJ_T0001511.1 MGP_CBAJ_G0001432.1 mouse_genomes_project 5 47863808 47865972 - TEC TEC MGP_CBAJ_T0099375.1 MGP_CBAJ_G0037630.1 mouse_genomes_project 5 104739284 104739391 + Gm25937 snRNA snRNA MGP_CBAJ_T0073277.1 MGP_CBAJ_G0029627.1 mouse_genomes_project 5 127420010 127426874 - MGP_CBAJ_P0073277 Dynll1 protein_coding protein_coding MGP_CBAJ_T0073278.1 MGP_CBAJ_G0029627.1 mouse_genomes_project 5 127421322 127426538 - Dynll1 protein_coding retained_intron MGP_CBAJ_T0073279.1 MGP_CBAJ_G0029627.1 mouse_genomes_project 5 127421331 127422336 - Dynll1 protein_coding processed_transcript MGP_CBAJ_T0073280.1 MGP_CBAJ_G0029627.1 mouse_genomes_project 5 127421405 127426787 - MGP_CBAJ_P0073280 Dynll1 protein_coding protein_coding MGP_CBAJ_T0073281.1 MGP_CBAJ_G0029627.1 mouse_genomes_project 5 127422456 127426754 - Dynll1 protein_coding processed_transcript MGP_CBAJ_T0073282.1 MGP_CBAJ_G0029627.1 mouse_genomes_project 5 127426180 127426809 - Dynll1 protein_coding retained_intron MGP_CBAJ_T0075504.1 MGP_CBAJ_G0030055.1 mouse_genomes_project 5 164731416 164738388 + MGP_CBAJ_P0075504 Gtf3a protein_coding protein_coding MGP_CBAJ_T0075505.1 MGP_CBAJ_G0030055.1 mouse_genomes_project 5 164731457 164738377 + Gtf3a protein_coding retained_intron MGP_CBAJ_T0075506.1 MGP_CBAJ_G0030055.1 mouse_genomes_project 5 164731464 164738380 + MGP_CBAJ_P0075506 Gtf3a protein_coding protein_coding MGP_CBAJ_T0075507.1 MGP_CBAJ_G0030055.1 mouse_genomes_project 5 164732751 164738377 + Gtf3a protein_coding retained_intron MGP_CBAJ_T0014731.1 MGP_CBAJ_G0012843.1 mouse_genomes_project 5 39858180 39858579 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0072301.1 MGP_CBAJ_G0029427.1 mouse_genomes_project 5 101469543 101552497 + MGP_CBAJ_P0072301 Sept11 protein_coding protein_coding MGP_CBAJ_T0072302.1 MGP_CBAJ_G0029427.1 mouse_genomes_project 5 101469544 101470184 + Sept11 protein_coding retained_intron MGP_CBAJ_T0072303.1 MGP_CBAJ_G0029427.1 mouse_genomes_project 5 101469544 101547514 + MGP_CBAJ_P0072303 Sept11 protein_coding protein_coding MGP_CBAJ_T0072304.1 MGP_CBAJ_G0029427.1 mouse_genomes_project 5 101469554 101539028 + MGP_CBAJ_P0072304 Sept11 protein_coding protein_coding MGP_CBAJ_T0072305.1 MGP_CBAJ_G0029427.1 mouse_genomes_project 5 101469557 101553975 + MGP_CBAJ_P0072305 Sept11 protein_coding protein_coding MGP_CBAJ_T0072306.1 MGP_CBAJ_G0029427.1 mouse_genomes_project 5 101469632 101553985 + MGP_CBAJ_P0072306 Sept11 protein_coding protein_coding MGP_CBAJ_T0072307.1 MGP_CBAJ_G0029427.1 mouse_genomes_project 5 101469642 101526205 + MGP_CBAJ_P0072307 Sept11 protein_coding protein_coding MGP_CBAJ_T0072308.1 MGP_CBAJ_G0029427.1 mouse_genomes_project 5 101469677 101553615 + MGP_CBAJ_P0072308 Sept11 protein_coding protein_coding MGP_CBAJ_T0072309.1 MGP_CBAJ_G0029427.1 mouse_genomes_project 5 101526164 101535441 + Sept11 protein_coding retained_intron MGP_CBAJ_T0071830.1 MGP_CBAJ_G0029313.1 mouse_genomes_project 5 82175416 82208879 - MGP_CBAJ_P0071830 Nmu protein_coding protein_coding MGP_CBAJ_T0074476.1 MGP_CBAJ_G0029835.1 mouse_genomes_project 5 150437782 150441753 - MGP_CBAJ_P0074476 Wbscr22 protein_coding protein_coding MGP_CBAJ_T0074477.1 MGP_CBAJ_G0029835.1 mouse_genomes_project 5 150437782 150449492 - MGP_CBAJ_P0074477 Wbscr22 protein_coding protein_coding MGP_CBAJ_T0074478.1 MGP_CBAJ_G0029835.1 mouse_genomes_project 5 150437784 150449785 - MGP_CBAJ_P0074478 Wbscr22 protein_coding protein_coding MGP_CBAJ_T0074479.1 MGP_CBAJ_G0029835.1 mouse_genomes_project 5 150437784 150448904 - MGP_CBAJ_P0074479 Wbscr22 protein_coding protein_coding MGP_CBAJ_T0074480.1 MGP_CBAJ_G0029835.1 mouse_genomes_project 5 150438110 150448865 - MGP_CBAJ_P0074480 Wbscr22 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074481.1 MGP_CBAJ_G0029835.1 mouse_genomes_project 5 150438112 150441553 - Wbscr22 protein_coding retained_intron MGP_CBAJ_T0074482.1 MGP_CBAJ_G0029835.1 mouse_genomes_project 5 150438158 150441845 - Wbscr22 protein_coding retained_intron MGP_CBAJ_T0074483.1 MGP_CBAJ_G0029835.1 mouse_genomes_project 5 150438438 150441739 - Wbscr22 protein_coding retained_intron MGP_CBAJ_T0074484.1 MGP_CBAJ_G0029835.1 mouse_genomes_project 5 150440874 150446295 - Wbscr22 protein_coding processed_transcript MGP_CBAJ_T0074485.1 MGP_CBAJ_G0029835.1 mouse_genomes_project 5 150441305 150448874 - Wbscr22 protein_coding retained_intron MGP_CBAJ_T0074486.1 MGP_CBAJ_G0029835.1 mouse_genomes_project 5 150441711 150446167 - Wbscr22 protein_coding retained_intron MGP_CBAJ_T0074487.1 MGP_CBAJ_G0029835.1 mouse_genomes_project 5 150444020 150448590 - MGP_CBAJ_P0074487 Wbscr22 protein_coding protein_coding MGP_CBAJ_T0074488.1 MGP_CBAJ_G0029835.1 mouse_genomes_project 5 150446086 150448916 - MGP_CBAJ_P0074488 Wbscr22 protein_coding protein_coding MGP_CBAJ_T0074489.1 MGP_CBAJ_G0029835.1 mouse_genomes_project 5 150448562 150448905 - Wbscr22 protein_coding processed_transcript MGP_CBAJ_T0074490.1 MGP_CBAJ_G0029835.1 mouse_genomes_project 5 150448982 150449475 - MGP_CBAJ_P0074490 Wbscr22 protein_coding protein_coding MGP_CBAJ_T0071980.1 MGP_CBAJ_G0029337.1 mouse_genomes_project 5 93649300 93680896 - MGP_CBAJ_P0071980 Tmprss11d protein_coding protein_coding MGP_CBAJ_T0071981.1 MGP_CBAJ_G0029337.1 mouse_genomes_project 5 93649300 93729202 - MGP_CBAJ_P0071981 Tmprss11d protein_coding protein_coding MGP_CBAJ_T0008191.1 MGP_CBAJ_G0006656.1 mouse_genomes_project 5 123745759 123764589 - Miat lincRNA lincRNA MGP_CBAJ_T0008192.1 MGP_CBAJ_G0006656.1 mouse_genomes_project 5 123745761 123764142 - Miat lincRNA lincRNA MGP_CBAJ_T0008194.1 MGP_CBAJ_G0006656.1 mouse_genomes_project 5 123753919 123763838 - Miat lincRNA lincRNA MGP_CBAJ_T0008195.1 MGP_CBAJ_G0006656.1 mouse_genomes_project 5 123754210 123764123 - Miat lincRNA lincRNA MGP_CBAJ_T0008196.1 MGP_CBAJ_G0006656.1 mouse_genomes_project 5 123754408 123763869 - Miat lincRNA lincRNA MGP_CBAJ_T0008197.1 MGP_CBAJ_G0006656.1 mouse_genomes_project 5 123763299 123763835 - Miat lincRNA lincRNA MGP_CBAJ_T0099352.1 MGP_CBAJ_G0037607.1 mouse_genomes_project 5 70222782 70222856 + Gm24399 snRNA snRNA MGP_CBAJ_T0071756.1 MGP_CBAJ_G0029301.1 mouse_genomes_project 5 79830702 80217804 - MGP_CBAJ_P0071756 Scfd2 protein_coding protein_coding MGP_CBAJ_T0071757.1 MGP_CBAJ_G0029301.1 mouse_genomes_project 5 79830965 79919035 - Scfd2 protein_coding processed_transcript MGP_CBAJ_T0071758.1 MGP_CBAJ_G0029301.1 mouse_genomes_project 5 79833882 79853249 - Scfd2 protein_coding retained_intron MGP_CBAJ_T0071759.1 MGP_CBAJ_G0029301.1 mouse_genomes_project 5 79833885 80217807 - MGP_CBAJ_P0071759 Scfd2 protein_coding protein_coding MGP_CBAJ_T0071760.1 MGP_CBAJ_G0029301.1 mouse_genomes_project 5 80056896 80059547 - MGP_CBAJ_P0071760 Scfd2 protein_coding protein_coding MGP_CBAJ_T0071761.1 MGP_CBAJ_G0029301.1 mouse_genomes_project 5 80117934 80217784 - MGP_CBAJ_P0071761 Scfd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071762.1 MGP_CBAJ_G0029301.1 mouse_genomes_project 5 80126499 80217814 - MGP_CBAJ_P0071762 Scfd2 protein_coding protein_coding MGP_CBAJ_T0071763.1 MGP_CBAJ_G0029301.1 mouse_genomes_project 5 80128612 80151797 - Scfd2 protein_coding retained_intron MGP_CBAJ_T0071764.1 MGP_CBAJ_G0029301.1 mouse_genomes_project 5 80194202 80217797 - Scfd2 protein_coding processed_transcript MGP_CBAJ_T0001398.1 MGP_CBAJ_G0001322.1 mouse_genomes_project 5 2986085 2988022 + TEC TEC MGP_CBAJ_T0099394.1 MGP_CBAJ_G0037649.1 mouse_genomes_project 5 136125270 136125371 + Gm22965 snRNA snRNA MGP_CBAJ_T0073519.1 MGP_CBAJ_G0029673.1 mouse_genomes_project 5 133661454 133667354 - MGP_CBAJ_P0073519 Cfap73 protein_coding protein_coding MGP_CBAJ_T0014716.1 MGP_CBAJ_G0012828.1 mouse_genomes_project 5 33769416 33769631 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0070221.1 MGP_CBAJ_G0029048.1 mouse_genomes_project 5 30354952 30357373 - MGP_CBAJ_P0070221 3110082J24Rik protein_coding protein_coding MGP_CBAJ_T0070222.1 MGP_CBAJ_G0029048.1 mouse_genomes_project 5 30355257 30356646 - MGP_CBAJ_P0070222 3110082J24Rik protein_coding protein_coding MGP_CBAJ_T0014633.1 MGP_CBAJ_G0012745.1 mouse_genomes_project 5 4182901 4183467 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008327.1 MGP_CBAJ_G0006746.1 mouse_genomes_project 5 160438619 160439410 + Gm43397 lincRNA lincRNA MGP_CBAJ_T0072518.1 MGP_CBAJ_G0029470.1 mouse_genomes_project 5 113358476 113384388 - MGP_CBAJ_P0072518 Slc10a6 protein_coding protein_coding MGP_CBAJ_T0014743.1 MGP_CBAJ_G0012855.1 mouse_genomes_project 5 47732321 47732946 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0070998.1 MGP_CBAJ_G0029169.1 mouse_genomes_project 5 38652743 38903979 - MGP_CBAJ_P0070998 Stk32b protein_coding protein_coding MGP_CBAJ_T0072975.1 MGP_CBAJ_G0029568.1 mouse_genomes_project 5 123890211 123892826 - Srrd protein_coding processed_transcript MGP_CBAJ_T0072976.1 MGP_CBAJ_G0029568.1 mouse_genomes_project 5 123890211 123895824 - MGP_CBAJ_P0072976 Srrd protein_coding protein_coding MGP_CBAJ_T0072977.1 MGP_CBAJ_G0029568.1 mouse_genomes_project 5 123890211 123895844 - MGP_CBAJ_P0072977 Srrd protein_coding protein_coding MGP_CBAJ_T0072978.1 MGP_CBAJ_G0029568.1 mouse_genomes_project 5 123890728 123892736 - Srrd protein_coding retained_intron MGP_CBAJ_T0072979.1 MGP_CBAJ_G0029568.1 mouse_genomes_project 5 123890791 123895822 - Srrd protein_coding processed_transcript MGP_CBAJ_T0072980.1 MGP_CBAJ_G0029568.1 mouse_genomes_project 5 123892522 123893023 - Srrd protein_coding processed_transcript MGP_CBAJ_T0011481.1 MGP_CBAJ_G0009619.1 mouse_genomes_project 5 123749844 123749994 - Gm27627 misc_RNA misc_RNA MGP_CBAJ_T0074316.1 MGP_CBAJ_G0029813.1 mouse_genomes_project 5 145719520 146209486 - MGP_CBAJ_P0074316 Wbscr17 protein_coding protein_coding MGP_CBAJ_T0074317.1 MGP_CBAJ_G0029813.1 mouse_genomes_project 5 145824111 146209065 - MGP_CBAJ_P0074317 Wbscr17 protein_coding protein_coding MGP_CBAJ_T0074318.1 MGP_CBAJ_G0029813.1 mouse_genomes_project 5 145951135 146207904 - Wbscr17 protein_coding retained_intron MGP_CBAJ_T0074319.1 MGP_CBAJ_G0029813.1 mouse_genomes_project 5 146028026 146208862 - Wbscr17 protein_coding retained_intron MGP_CBAJ_T0074320.1 MGP_CBAJ_G0029813.1 mouse_genomes_project 5 146207838 146209067 - Wbscr17 protein_coding processed_transcript MGP_CBAJ_T0008028.1 MGP_CBAJ_G0006536.1 mouse_genomes_project 5 54927969 54946593 - C130083M11Rik lincRNA lincRNA MGP_CBAJ_T0072776.1 MGP_CBAJ_G0029527.1 mouse_genomes_project 5 119191866 119205987 - Dgkq protein_coding retained_intron MGP_CBAJ_T0072777.1 MGP_CBAJ_G0029527.1 mouse_genomes_project 5 119191866 119217399 - MGP_CBAJ_P0072777 Dgkq protein_coding nonsense_mediated_decay MGP_CBAJ_T0072778.1 MGP_CBAJ_G0029527.1 mouse_genomes_project 5 119191866 119205987 - MGP_CBAJ_P0072778 Dgkq protein_coding protein_coding MGP_CBAJ_T0072779.1 MGP_CBAJ_G0029527.1 mouse_genomes_project 5 119191866 119205987 - MGP_CBAJ_P0072779 Dgkq protein_coding nonsense_mediated_decay MGP_CBAJ_T0072780.1 MGP_CBAJ_G0029527.1 mouse_genomes_project 5 119191866 119205987 - MGP_CBAJ_P0072780 Dgkq protein_coding nonsense_mediated_decay MGP_CBAJ_T0072781.1 MGP_CBAJ_G0029527.1 mouse_genomes_project 5 119192220 119205987 - Dgkq protein_coding retained_intron MGP_CBAJ_T0072782.1 MGP_CBAJ_G0029527.1 mouse_genomes_project 5 119192220 119198839 - Dgkq protein_coding retained_intron MGP_CBAJ_T0072783.1 MGP_CBAJ_G0029527.1 mouse_genomes_project 5 119192447 119195110 - Dgkq protein_coding retained_intron MGP_CBAJ_T0072784.1 MGP_CBAJ_G0029527.1 mouse_genomes_project 5 119196041 119198683 - Dgkq protein_coding retained_intron MGP_CBAJ_T0072785.1 MGP_CBAJ_G0029527.1 mouse_genomes_project 5 119198683 119200307 - Dgkq protein_coding retained_intron MGP_CBAJ_T0072786.1 MGP_CBAJ_G0029527.1 mouse_genomes_project 5 119199717 119201171 - Dgkq protein_coding retained_intron MGP_CBAJ_T0008319.1 MGP_CBAJ_G0006739.1 mouse_genomes_project 5 156027666 156052021 + 4930500L23Rik lincRNA lincRNA MGP_CBAJ_T0014683.1 MGP_CBAJ_G0012795.1 mouse_genomes_project 5 22826180 22826805 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0075621.1 MGP_CBAJ_G0030077.1 mouse_genomes_project 5 167727050 167762204 + MGP_CBAJ_P0075621 Tex26 protein_coding protein_coding MGP_CBAJ_T0075622.1 MGP_CBAJ_G0030077.1 mouse_genomes_project 5 167727072 167728392 + Tex26 protein_coding processed_transcript MGP_CBAJ_T0075623.1 MGP_CBAJ_G0030077.1 mouse_genomes_project 5 167727096 167762204 + MGP_CBAJ_P0075623 Tex26 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075624.1 MGP_CBAJ_G0030077.1 mouse_genomes_project 5 167727105 167762116 + MGP_CBAJ_P0075624 Tex26 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075625.1 MGP_CBAJ_G0030077.1 mouse_genomes_project 5 167727109 167762116 + MGP_CBAJ_P0075625 Tex26 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075626.1 MGP_CBAJ_G0030077.1 mouse_genomes_project 5 167727117 167762022 + MGP_CBAJ_P0075626 Tex26 protein_coding protein_coding MGP_CBAJ_T0008334.1 MGP_CBAJ_G0006751.1 mouse_genomes_project 5 163868552 163870091 - Gm43625 lincRNA lincRNA MGP_CBAJ_T0001525.1 MGP_CBAJ_G0001446.1 mouse_genomes_project 5 51213315 51216212 - TEC TEC MGP_CBAJ_T0075385.1 MGP_CBAJ_G0030021.1 mouse_genomes_project 5 162259213 162296410 - MGP_CBAJ_P0075385 Kpna7 protein_coding protein_coding MGP_CBAJ_T0075386.1 MGP_CBAJ_G0030021.1 mouse_genomes_project 5 162259422 162295397 - MGP_CBAJ_P0075386 Kpna7 protein_coding protein_coding MGP_CBAJ_T0075387.1 MGP_CBAJ_G0030021.1 mouse_genomes_project 5 162261384 162293785 - MGP_CBAJ_P0075387 Kpna7 protein_coding protein_coding MGP_CBAJ_T0075388.1 MGP_CBAJ_G0030021.1 mouse_genomes_project 5 162275127 162289106 - Kpna7 protein_coding processed_transcript MGP_CBAJ_T0075389.1 MGP_CBAJ_G0030021.1 mouse_genomes_project 5 162285636 162293209 - MGP_CBAJ_P0075389 Kpna7 protein_coding protein_coding MGP_CBAJ_T0075390.1 MGP_CBAJ_G0030021.1 mouse_genomes_project 5 162291704 162432195 - MGP_CBAJ_P0075390 Kpna7 protein_coding protein_coding MGP_CBAJ_T0001628.1 MGP_CBAJ_G0001547.1 mouse_genomes_project 5 72581430 72583185 - TEC TEC MGP_CBAJ_T0072808.1 MGP_CBAJ_G0029533.1 mouse_genomes_project 5 119776172 119788479 - MGP_CBAJ_P0072808 protein_coding protein_coding MGP_CBAJ_T0070634.1 MGP_CBAJ_G0029114.1 mouse_genomes_project 5 34378968 34413619 - MGP_CBAJ_P0070634 Fam53a protein_coding protein_coding MGP_CBAJ_T0070635.1 MGP_CBAJ_G0029114.1 mouse_genomes_project 5 34378977 34412896 - MGP_CBAJ_P0070635 Fam53a protein_coding protein_coding MGP_CBAJ_T0070636.1 MGP_CBAJ_G0029114.1 mouse_genomes_project 5 34378977 34413606 - MGP_CBAJ_P0070636 Fam53a protein_coding protein_coding MGP_CBAJ_T0070637.1 MGP_CBAJ_G0029114.1 mouse_genomes_project 5 34378977 34413572 - MGP_CBAJ_P0070637 Fam53a protein_coding nonsense_mediated_decay MGP_CBAJ_T0070638.1 MGP_CBAJ_G0029114.1 mouse_genomes_project 5 34386873 34413567 - MGP_CBAJ_P0070638 Fam53a protein_coding nonsense_mediated_decay MGP_CBAJ_T0070639.1 MGP_CBAJ_G0029114.1 mouse_genomes_project 5 34387046 34413583 - MGP_CBAJ_P0070639 Fam53a protein_coding protein_coding MGP_CBAJ_T0070640.1 MGP_CBAJ_G0029114.1 mouse_genomes_project 5 34389118 34413046 - MGP_CBAJ_P0070640 Fam53a protein_coding protein_coding MGP_CBAJ_T0070641.1 MGP_CBAJ_G0029114.1 mouse_genomes_project 5 34393459 34413589 - Fam53a protein_coding processed_transcript MGP_CBAJ_T0099366.1 MGP_CBAJ_G0037621.1 mouse_genomes_project 5 89605049 89605146 + Gm24129 snRNA snRNA MGP_CBAJ_T0008099.1 MGP_CBAJ_G0006594.1 mouse_genomes_project 5 100236766 100252683 + Gm26582 lincRNA lincRNA MGP_CBAJ_T0069613.1 MGP_CBAJ_G0028930.1 mouse_genomes_project 5 1095481 1124123 - MGP_CBAJ_P0069613 Cyp51 protein_coding protein_coding MGP_CBAJ_T0069614.1 MGP_CBAJ_G0028930.1 mouse_genomes_project 5 1097604 1123720 - Cyp51 protein_coding processed_transcript MGP_CBAJ_T0069615.1 MGP_CBAJ_G0028930.1 mouse_genomes_project 5 1118652 1122758 - Cyp51 protein_coding retained_intron MGP_CBAJ_T0069616.1 MGP_CBAJ_G0028930.1 mouse_genomes_project 5 1120425 1123798 - Cyp51 protein_coding retained_intron MGP_CBAJ_T0008230.1 MGP_CBAJ_G0006681.1 mouse_genomes_project 5 131694656 131702389 + Gm43342 lincRNA lincRNA MGP_CBAJ_T0014729.1 MGP_CBAJ_G0012841.1 mouse_genomes_project 5 38609461 38609941 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097821.1 MGP_CBAJ_G0036094.1 mouse_genomes_project 5 128274309 128274477 - pseudogene pseudogene MGP_CBAJ_T0001568.1 MGP_CBAJ_G0001488.1 mouse_genomes_project 5 61338247 61340423 + TEC TEC MGP_CBAJ_T0073596.1 MGP_CBAJ_G0029695.1 mouse_genomes_project 5 134880880 134913456 - MGP_CBAJ_P0073596 Mapkapk5 protein_coding protein_coding MGP_CBAJ_T0073597.1 MGP_CBAJ_G0029695.1 mouse_genomes_project 5 134880890 134912751 - MGP_CBAJ_P0073597 Mapkapk5 protein_coding protein_coding MGP_CBAJ_T0073598.1 MGP_CBAJ_G0029695.1 mouse_genomes_project 5 134880894 134883100 - Mapkapk5 protein_coding retained_intron MGP_CBAJ_T0073599.1 MGP_CBAJ_G0029695.1 mouse_genomes_project 5 134880894 134881681 - Mapkapk5 protein_coding retained_intron MGP_CBAJ_T0073600.1 MGP_CBAJ_G0029695.1 mouse_genomes_project 5 134880894 134883033 - MGP_CBAJ_P0073600 Mapkapk5 protein_coding protein_coding MGP_CBAJ_T0073601.1 MGP_CBAJ_G0029695.1 mouse_genomes_project 5 134880898 134905247 - Mapkapk5 protein_coding processed_transcript MGP_CBAJ_T0073602.1 MGP_CBAJ_G0029695.1 mouse_genomes_project 5 134880987 134912751 - MGP_CBAJ_P0073602 Mapkapk5 protein_coding protein_coding MGP_CBAJ_T0073603.1 MGP_CBAJ_G0029695.1 mouse_genomes_project 5 134880987 134912751 - MGP_CBAJ_P0073603 Mapkapk5 protein_coding protein_coding MGP_CBAJ_T0073604.1 MGP_CBAJ_G0029695.1 mouse_genomes_project 5 134881606 134912751 - Mapkapk5 protein_coding processed_transcript MGP_CBAJ_T0073605.1 MGP_CBAJ_G0029695.1 mouse_genomes_project 5 134882402 134896918 - Mapkapk5 protein_coding retained_intron MGP_CBAJ_T0073606.1 MGP_CBAJ_G0029695.1 mouse_genomes_project 5 134898459 134903377 - MGP_CBAJ_P0073606 Mapkapk5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073607.1 MGP_CBAJ_G0029695.1 mouse_genomes_project 5 134898654 134912782 - MGP_CBAJ_P0073607 Mapkapk5 protein_coding protein_coding MGP_CBAJ_T0073608.1 MGP_CBAJ_G0029695.1 mouse_genomes_project 5 134899743 134904710 - Mapkapk5 protein_coding processed_transcript MGP_CBAJ_T0015001.1 MGP_CBAJ_G0013113.1 mouse_genomes_project 5 169868355 169868879 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001604.1 MGP_CBAJ_G0001523.1 mouse_genomes_project 5 70461233 70462841 + TEC TEC MGP_CBAJ_T0071788.1 MGP_CBAJ_G0029304.1 mouse_genomes_project 5 80717640 80771622 - MGP_CBAJ_P0071788 Chic2 protein_coding protein_coding MGP_CBAJ_T0071789.1 MGP_CBAJ_G0029304.1 mouse_genomes_project 5 80730852 80771160 - Chic2 protein_coding retained_intron MGP_CBAJ_T0074519.1 MGP_CBAJ_G0029842.1 mouse_genomes_project 5 150661974 150664267 - MGP_CBAJ_P0074519 Fzd9 protein_coding protein_coding MGP_CBAJ_T0074279.1 MGP_CBAJ_G0029804.1 mouse_genomes_project 5 144760606 144826131 + MGP_CBAJ_P0074279 Tpst1 protein_coding protein_coding MGP_CBAJ_T0074280.1 MGP_CBAJ_G0029804.1 mouse_genomes_project 5 144766650 144826131 + MGP_CBAJ_P0074280 Tpst1 protein_coding protein_coding MGP_CBAJ_T0074281.1 MGP_CBAJ_G0029804.1 mouse_genomes_project 5 144780814 144792140 + MGP_CBAJ_P0074281 Tpst1 protein_coding protein_coding MGP_CBAJ_T0074282.1 MGP_CBAJ_G0029804.1 mouse_genomes_project 5 144824358 144826114 + Tpst1 protein_coding retained_intron MGP_CBAJ_T0001831.1 MGP_CBAJ_G0001748.1 mouse_genomes_project 5 147492978 147495299 - TEC TEC MGP_CBAJ_T0073547.1 MGP_CBAJ_G0029683.1 mouse_genomes_project 5 134020997 134064149 - protein_coding retained_intron MGP_CBAJ_T0004774.1 MGP_CBAJ_G0004105.1 mouse_genomes_project 5 150375076 150376216 - Abhd11os antisense antisense MGP_CBAJ_T0004775.1 MGP_CBAJ_G0004105.1 mouse_genomes_project 5 150375084 150376117 - Abhd11os antisense antisense MGP_CBAJ_T0001747.1 MGP_CBAJ_G0001665.1 mouse_genomes_project 5 130037154 130038110 + TEC TEC MGP_CBAJ_T0010568.1 MGP_CBAJ_G0008706.1 mouse_genomes_project 5 90351530 90351613 + Gm44303 miRNA miRNA MGP_CBAJ_T0001668.1 MGP_CBAJ_G0001586.1 mouse_genomes_project 5 88196209 88197156 + TEC TEC MGP_CBAJ_T0072809.1 MGP_CBAJ_G0029534.1 mouse_genomes_project 5 119776194 119822892 - MGP_CBAJ_P0072809 protein_coding protein_coding MGP_CBAJ_T0100622.1 MGP_CBAJ_G0038877.1 mouse_genomes_project 5 95234639 95234762 + Gm25066 snoRNA snoRNA MGP_CBAJ_T0001839.1 MGP_CBAJ_G0001755.1 mouse_genomes_project 5 149462602 149466268 - TEC TEC MGP_CBAJ_T0075619.1 MGP_CBAJ_G0030076.1 mouse_genomes_project 5 167683828 167701592 + Medag protein_coding retained_intron MGP_CBAJ_T0075620.1 MGP_CBAJ_G0030076.1 mouse_genomes_project 5 167684034 167711618 + MGP_CBAJ_P0075620 Medag protein_coding protein_coding MGP_CBAJ_T0072021.1 MGP_CBAJ_G0029356.1 mouse_genomes_project 5 95050975 95073316 - MGP_CBAJ_P0072021 Sult1e1 protein_coding protein_coding MGP_CBAJ_T0008359.1 MGP_CBAJ_G0006773.1 mouse_genomes_project 5 167492430 167510228 - Gm29264 lincRNA lincRNA MGP_CBAJ_T0001745.1 MGP_CBAJ_G0001663.1 mouse_genomes_project 5 129230107 129230540 + TEC TEC MGP_CBAJ_T0001474.1 MGP_CBAJ_G0001395.1 mouse_genomes_project 5 36594496 36595142 - TEC TEC MGP_CBAJ_T0070503.1 MGP_CBAJ_G0029092.1 mouse_genomes_project 5 31959785 31962522 + 4930548H24Rik protein_coding retained_intron MGP_CBAJ_T0070504.1 MGP_CBAJ_G0029092.1 mouse_genomes_project 5 31959904 31962522 + MGP_CBAJ_P0070504 4930548H24Rik protein_coding protein_coding MGP_CBAJ_T0070156.1 MGP_CBAJ_G0029034.1 mouse_genomes_project 5 28070066 28079218 + MGP_CBAJ_P0070156 Insig1 protein_coding protein_coding MGP_CBAJ_T0070157.1 MGP_CBAJ_G0029034.1 mouse_genomes_project 5 28073369 28075755 + Insig1 protein_coding retained_intron MGP_CBAJ_T0014946.1 MGP_CBAJ_G0013058.1 mouse_genomes_project 5 153143831 153144078 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008300.1 MGP_CBAJ_G0006723.1 mouse_genomes_project 5 146310525 146333602 - Gm42590 lincRNA lincRNA MGP_CBAJ_T0075103.1 MGP_CBAJ_G0029958.1 mouse_genomes_project 5 156361600 156372331 - MGP_CBAJ_P0075103 Tmem184a protein_coding protein_coding MGP_CBAJ_T0075104.1 MGP_CBAJ_G0029958.1 mouse_genomes_project 5 156364069 156373390 - MGP_CBAJ_P0075104 Tmem184a protein_coding protein_coding MGP_CBAJ_T0075105.1 MGP_CBAJ_G0029958.1 mouse_genomes_project 5 156366384 156367098 - Tmem184a protein_coding retained_intron MGP_CBAJ_T0075107.1 MGP_CBAJ_G0029958.1 mouse_genomes_project 5 156367607 156373149 - MGP_CBAJ_P0075107 Tmem184a protein_coding protein_coding MGP_CBAJ_T0075108.1 MGP_CBAJ_G0029958.1 mouse_genomes_project 5 156372095 156378890 - MGP_CBAJ_P0075108 Tmem184a protein_coding protein_coding MGP_CBAJ_T0073728.1 MGP_CBAJ_G0029714.1 mouse_genomes_project 5 136000122 136010521 + Arpc3 protein_coding retained_intron MGP_CBAJ_T0073729.1 MGP_CBAJ_G0029714.1 mouse_genomes_project 5 136000166 136005393 + Arpc3 protein_coding retained_intron MGP_CBAJ_T0073730.1 MGP_CBAJ_G0029714.1 mouse_genomes_project 5 136000192 136014126 + MGP_CBAJ_P0073730 Arpc3 protein_coding protein_coding MGP_CBAJ_T0073731.1 MGP_CBAJ_G0029714.1 mouse_genomes_project 5 136005066 136022477 + MGP_CBAJ_P0073731 Arpc3 protein_coding protein_coding MGP_CBAJ_T0073732.1 MGP_CBAJ_G0029714.1 mouse_genomes_project 5 136008465 136014341 + MGP_CBAJ_P0073732 Arpc3 protein_coding protein_coding MGP_CBAJ_T0073733.1 MGP_CBAJ_G0029714.1 mouse_genomes_project 5 136008592 136014332 + MGP_CBAJ_P0073733 Arpc3 protein_coding protein_coding MGP_CBAJ_T0073734.1 MGP_CBAJ_G0029714.1 mouse_genomes_project 5 136011608 136012976 + Arpc3 protein_coding retained_intron MGP_CBAJ_T0014672.1 MGP_CBAJ_G0012784.1 mouse_genomes_project 5 21569025 21569397 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001445.1 MGP_CBAJ_G0001368.1 mouse_genomes_project 5 28182098 28182463 - TEC TEC MGP_CBAJ_T0072770.1 MGP_CBAJ_G0029526.1 mouse_genomes_project 5 119168876 119189210 + MGP_CBAJ_P0072770 Tmem175 protein_coding protein_coding MGP_CBAJ_T0072771.1 MGP_CBAJ_G0029526.1 mouse_genomes_project 5 119168938 119193961 + MGP_CBAJ_P0072771 Tmem175 protein_coding protein_coding MGP_CBAJ_T0072772.1 MGP_CBAJ_G0029526.1 mouse_genomes_project 5 119169105 119192437 + MGP_CBAJ_P0072772 Tmem175 protein_coding protein_coding MGP_CBAJ_T0072773.1 MGP_CBAJ_G0029526.1 mouse_genomes_project 5 119169112 119191845 + MGP_CBAJ_P0072773 Tmem175 protein_coding protein_coding MGP_CBAJ_T0072774.1 MGP_CBAJ_G0029526.1 mouse_genomes_project 5 119186861 119188375 + Tmem175 protein_coding retained_intron MGP_CBAJ_T0072775.1 MGP_CBAJ_G0029526.1 mouse_genomes_project 5 119189504 119190287 + Tmem175 protein_coding processed_transcript MGP_CBAJ_T0069992.1 MGP_CBAJ_G0028999.1 mouse_genomes_project 5 23657265 23727730 + MGP_CBAJ_P0069992 Klhl7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069993.1 MGP_CBAJ_G0028999.1 mouse_genomes_project 5 23657307 23697164 + Klhl7 protein_coding retained_intron MGP_CBAJ_T0069994.1 MGP_CBAJ_G0028999.1 mouse_genomes_project 5 23657414 23730319 + MGP_CBAJ_P0069994 Klhl7 protein_coding protein_coding MGP_CBAJ_T0074727.1 MGP_CBAJ_G0029881.1 mouse_genomes_project 5 152870153 152884239 - MGP_CBAJ_P0074727 Trim56 protein_coding protein_coding MGP_CBAJ_T0074728.1 MGP_CBAJ_G0029881.1 mouse_genomes_project 5 152882055 152884241 - MGP_CBAJ_P0074728 Trim56 protein_coding protein_coding MGP_CBAJ_T0098399.1 MGP_CBAJ_G0036665.1 mouse_genomes_project 5 2398016 2406091 - sense_intronic sense_intronic MGP_CBAJ_T0073061.1 MGP_CBAJ_G0029586.1 mouse_genomes_project 5 125532301 125539163 + MGP_CBAJ_P0073061 Iscu protein_coding protein_coding MGP_CBAJ_T0073062.1 MGP_CBAJ_G0029586.1 mouse_genomes_project 5 125532356 125539148 + MGP_CBAJ_P0073062 Iscu protein_coding protein_coding MGP_CBAJ_T0073063.1 MGP_CBAJ_G0029586.1 mouse_genomes_project 5 125532356 125538673 + MGP_CBAJ_P0073063 Iscu protein_coding protein_coding MGP_CBAJ_T0073064.1 MGP_CBAJ_G0029586.1 mouse_genomes_project 5 125532371 125536630 + MGP_CBAJ_P0073064 Iscu protein_coding nonsense_mediated_decay MGP_CBAJ_T0073065.1 MGP_CBAJ_G0029586.1 mouse_genomes_project 5 125532558 125538889 + MGP_CBAJ_P0073065 Iscu protein_coding protein_coding MGP_CBAJ_T0073066.1 MGP_CBAJ_G0029586.1 mouse_genomes_project 5 125532578 125538820 + MGP_CBAJ_P0073066 Iscu protein_coding nonsense_mediated_decay MGP_CBAJ_T0073067.1 MGP_CBAJ_G0029586.1 mouse_genomes_project 5 125533405 125538716 + MGP_CBAJ_P0073067 Iscu protein_coding protein_coding MGP_CBAJ_T0073283.1 MGP_CBAJ_G0029628.1 mouse_genomes_project 5 127458253 127464098 + MGP_CBAJ_P0073283 Srsf9 protein_coding protein_coding MGP_CBAJ_T0073284.1 MGP_CBAJ_G0029628.1 mouse_genomes_project 5 127458673 127464027 + Srsf9 protein_coding processed_transcript MGP_CBAJ_T0073285.1 MGP_CBAJ_G0029628.1 mouse_genomes_project 5 127459657 127463668 + Srsf9 protein_coding processed_transcript MGP_CBAJ_T0073286.1 MGP_CBAJ_G0029628.1 mouse_genomes_project 5 127461595 127464027 + MGP_CBAJ_P0073286 Srsf9 protein_coding protein_coding MGP_CBAJ_T0008119.1 MGP_CBAJ_G0006610.1 mouse_genomes_project 5 109241407 109250638 + lincRNA lincRNA MGP_CBAJ_T0001738.1 MGP_CBAJ_G0001656.1 mouse_genomes_project 5 127573573 127575477 - TEC TEC MGP_CBAJ_T0071595.1 MGP_CBAJ_G0029268.1 mouse_genomes_project 5 72776896 72812246 + MGP_CBAJ_P0071595 Gm5108 protein_coding protein_coding MGP_CBAJ_T0071596.1 MGP_CBAJ_G0029268.1 mouse_genomes_project 5 72776966 72812176 + Gm5108 protein_coding antisense MGP_CBAJ_T0071597.1 MGP_CBAJ_G0029268.1 mouse_genomes_project 5 72776966 72812181 + Gm5108 protein_coding antisense MGP_CBAJ_T0001496.1 MGP_CBAJ_G0001417.1 mouse_genomes_project 5 46258360 46258703 + TEC TEC MGP_CBAJ_T0014719.1 MGP_CBAJ_G0012831.1 mouse_genomes_project 5 33998139 33999184 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004753.1 MGP_CBAJ_G0004089.1 mouse_genomes_project 5 138701238 138704320 - 4930404A12Rik antisense antisense MGP_CBAJ_T0004754.1 MGP_CBAJ_G0004089.1 mouse_genomes_project 5 138701239 138704320 - 4930404A12Rik antisense antisense MGP_CBAJ_T0072880.1 MGP_CBAJ_G0029550.1 mouse_genomes_project 5 121653616 121664749 + Lrcol1 protein_coding retained_intron MGP_CBAJ_T0072881.1 MGP_CBAJ_G0029550.1 mouse_genomes_project 5 121653616 121664749 + MGP_CBAJ_P0072881 Lrcol1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072882.1 MGP_CBAJ_G0029550.1 mouse_genomes_project 5 121653616 121664749 + MGP_CBAJ_P0072882 Lrcol1 protein_coding protein_coding MGP_CBAJ_T0072883.1 MGP_CBAJ_G0029550.1 mouse_genomes_project 5 121662851 121664822 + MGP_CBAJ_P0072883 Lrcol1 protein_coding protein_coding MGP_CBAJ_T0072884.1 MGP_CBAJ_G0029550.1 mouse_genomes_project 5 121662913 121664759 + MGP_CBAJ_P0072884 Lrcol1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0008079.1 MGP_CBAJ_G0006577.1 mouse_genomes_project 5 83113868 83115650 - Gm42757 lincRNA lincRNA MGP_CBAJ_T0098059.1 MGP_CBAJ_G0036332.1 mouse_genomes_project 5 98943779 98943896 + Gm22816 rRNA rRNA MGP_CBAJ_T0014723.1 MGP_CBAJ_G0012835.1 mouse_genomes_project 5 34930426 34930757 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0073428.1 MGP_CBAJ_G0029653.1 mouse_genomes_project 5 130322392 130436119 + MGP_CBAJ_P0073428 Nos1 protein_coding protein_coding MGP_CBAJ_T0073429.1 MGP_CBAJ_G0029653.1 mouse_genomes_project 5 130322415 130435749 + Nos1 protein_coding processed_transcript MGP_CBAJ_T0073430.1 MGP_CBAJ_G0029653.1 mouse_genomes_project 5 130394351 130541148 + MGP_CBAJ_P0073430 Nos1 protein_coding protein_coding MGP_CBAJ_T0073431.1 MGP_CBAJ_G0029653.1 mouse_genomes_project 5 130394687 130536730 + MGP_CBAJ_P0073431 Nos1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073432.1 MGP_CBAJ_G0029653.1 mouse_genomes_project 5 130435776 130536276 + MGP_CBAJ_P0073432 Nos1 protein_coding protein_coding MGP_CBAJ_T0073433.1 MGP_CBAJ_G0029653.1 mouse_genomes_project 5 130435781 130536180 + MGP_CBAJ_P0073433 Nos1 protein_coding protein_coding MGP_CBAJ_T0073434.1 MGP_CBAJ_G0029653.1 mouse_genomes_project 5 130493954 130500490 + Nos1 protein_coding processed_transcript MGP_CBAJ_T0073648.1 MGP_CBAJ_G0029701.1 mouse_genomes_project 5 135288785 135312745 - MGP_CBAJ_P0073648 Sh2b3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073649.1 MGP_CBAJ_G0029701.1 mouse_genomes_project 5 135288945 135312779 - MGP_CBAJ_P0073649 Sh2b3 protein_coding protein_coding MGP_CBAJ_T0073650.1 MGP_CBAJ_G0029701.1 mouse_genomes_project 5 135289609 135302043 - MGP_CBAJ_P0073650 Sh2b3 protein_coding protein_coding MGP_CBAJ_T0073651.1 MGP_CBAJ_G0029701.1 mouse_genomes_project 5 135290307 135309374 - MGP_CBAJ_P0073651 Sh2b3 protein_coding protein_coding MGP_CBAJ_T0073652.1 MGP_CBAJ_G0029701.1 mouse_genomes_project 5 135290513 135312770 - MGP_CBAJ_P0073652 Sh2b3 protein_coding protein_coding MGP_CBAJ_T0073653.1 MGP_CBAJ_G0029701.1 mouse_genomes_project 5 135290587 135312737 - MGP_CBAJ_P0073653 Sh2b3 protein_coding protein_coding MGP_CBAJ_T0073654.1 MGP_CBAJ_G0029701.1 mouse_genomes_project 5 135292404 135313566 - MGP_CBAJ_P0073654 Sh2b3 protein_coding protein_coding MGP_CBAJ_T0073655.1 MGP_CBAJ_G0029701.1 mouse_genomes_project 5 135301869 135309534 - MGP_CBAJ_P0073655 Sh2b3 protein_coding protein_coding MGP_CBAJ_T0004777.1 MGP_CBAJ_G0004107.1 mouse_genomes_project 5 151330227 151332135 - Srrm3os antisense antisense MGP_CBAJ_T0070605.1 MGP_CBAJ_G0029108.1 mouse_genomes_project 5 33833880 33899387 + MGP_CBAJ_P0070605 Slc5a1 protein_coding protein_coding MGP_CBAJ_T0017953.1 MGP_CBAJ_G0015360.1 mouse_genomes_project 5 167628469 167712389 + Gm20488 processed_transcript processed_transcript MGP_CBAJ_T0008081.1 MGP_CBAJ_G0006579.1 mouse_genomes_project 5 83525910 83529274 + 1700017L05Rik lincRNA lincRNA MGP_CBAJ_T0014821.1 MGP_CBAJ_G0012933.1 mouse_genomes_project 5 84718910 84719274 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001601.1 MGP_CBAJ_G0001520.1 mouse_genomes_project 5 70239192 70240744 - TEC TEC MGP_CBAJ_T0004622.1 MGP_CBAJ_G0003997.1 mouse_genomes_project 5 71742760 71743311 - Gm15949 antisense antisense MGP_CBAJ_T0008062.1 MGP_CBAJ_G0006563.1 mouse_genomes_project 5 79707313 79709669 + Dancr lincRNA lincRNA MGP_CBAJ_T0008063.1 MGP_CBAJ_G0006563.1 mouse_genomes_project 5 79707313 79709668 + Dancr lincRNA lincRNA MGP_CBAJ_T0074907.1 MGP_CBAJ_G0029920.1 mouse_genomes_project 5 154134764 154151437 + MGP_CBAJ_P0074907 Zscan21 protein_coding protein_coding MGP_CBAJ_T0074908.1 MGP_CBAJ_G0029920.1 mouse_genomes_project 5 154134777 154151489 + MGP_CBAJ_P0074908 Zscan21 protein_coding protein_coding MGP_CBAJ_T0074909.1 MGP_CBAJ_G0029920.1 mouse_genomes_project 5 154134798 154151438 + MGP_CBAJ_P0074909 Zscan21 protein_coding protein_coding MGP_CBAJ_T0074910.1 MGP_CBAJ_G0029920.1 mouse_genomes_project 5 154134798 154151489 + MGP_CBAJ_P0074910 Zscan21 protein_coding protein_coding MGP_CBAJ_T0074911.1 MGP_CBAJ_G0029920.1 mouse_genomes_project 5 154134841 154150471 + MGP_CBAJ_P0074911 Zscan21 protein_coding protein_coding MGP_CBAJ_T0074912.1 MGP_CBAJ_G0029920.1 mouse_genomes_project 5 154134843 154142746 + MGP_CBAJ_P0074912 Zscan21 protein_coding protein_coding MGP_CBAJ_T0074913.1 MGP_CBAJ_G0029920.1 mouse_genomes_project 5 154134902 154151440 + MGP_CBAJ_P0074913 Zscan21 protein_coding protein_coding MGP_CBAJ_T0001846.1 MGP_CBAJ_G0001762.1 mouse_genomes_project 5 151081539 151084917 - TEC TEC MGP_CBAJ_T0073249.1 MGP_CBAJ_G0029623.1 mouse_genomes_project 5 127257638 127292459 - MGP_CBAJ_P0073249 Cabp1 protein_coding protein_coding MGP_CBAJ_T0073250.1 MGP_CBAJ_G0029623.1 mouse_genomes_project 5 127257638 127284452 - MGP_CBAJ_P0073250 Cabp1 protein_coding protein_coding MGP_CBAJ_T0073251.1 MGP_CBAJ_G0029623.1 mouse_genomes_project 5 127257662 127279564 - Cabp1 protein_coding processed_transcript MGP_CBAJ_T0073252.1 MGP_CBAJ_G0029623.1 mouse_genomes_project 5 127257894 127284265 - MGP_CBAJ_P0073252 Cabp1 protein_coding protein_coding MGP_CBAJ_T0073253.1 MGP_CBAJ_G0029623.1 mouse_genomes_project 5 127257919 127284202 - MGP_CBAJ_P0073253 Cabp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073254.1 MGP_CBAJ_G0029623.1 mouse_genomes_project 5 127265368 127279401 - Cabp1 protein_coding retained_intron MGP_CBAJ_T0073255.1 MGP_CBAJ_G0029623.1 mouse_genomes_project 5 127272555 127282286 - Cabp1 protein_coding retained_intron MGP_CBAJ_T0075526.1 MGP_CBAJ_G0030063.1 mouse_genomes_project 5 165211815 165290041 - MGP_CBAJ_P0075526 Flt3 protein_coding protein_coding MGP_CBAJ_T0075527.1 MGP_CBAJ_G0030063.1 mouse_genomes_project 5 165247883 165290041 - Flt3 protein_coding processed_transcript MGP_CBAJ_T0072161.1 MGP_CBAJ_G0029394.1 mouse_genomes_project 5 98611727 98649653 - MGP_CBAJ_P0072161 Rassf6 protein_coding protein_coding MGP_CBAJ_T0072162.1 MGP_CBAJ_G0029394.1 mouse_genomes_project 5 98611727 98649653 - MGP_CBAJ_P0072162 Rassf6 protein_coding protein_coding MGP_CBAJ_T0072163.1 MGP_CBAJ_G0029394.1 mouse_genomes_project 5 98612274 98618475 - MGP_CBAJ_P0072163 Rassf6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072164.1 MGP_CBAJ_G0029394.1 mouse_genomes_project 5 98612482 98649820 - MGP_CBAJ_P0072164 Rassf6 protein_coding protein_coding MGP_CBAJ_T0072165.1 MGP_CBAJ_G0029394.1 mouse_genomes_project 5 98626262 98649791 - MGP_CBAJ_P0072165 Rassf6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072166.1 MGP_CBAJ_G0029394.1 mouse_genomes_project 5 98630799 98649690 - MGP_CBAJ_P0072166 Rassf6 protein_coding protein_coding MGP_CBAJ_T0072167.1 MGP_CBAJ_G0029394.1 mouse_genomes_project 5 98647637 98649818 - Rassf6 protein_coding processed_transcript MGP_CBAJ_T0001472.1 MGP_CBAJ_G0001393.1 mouse_genomes_project 5 36406803 36407258 + TEC TEC MGP_CBAJ_T0014772.1 MGP_CBAJ_G0012884.1 mouse_genomes_project 5 63857636 63858070 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014885.1 MGP_CBAJ_G0012997.1 mouse_genomes_project 5 117718421 117724526 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014996.1 MGP_CBAJ_G0013108.1 mouse_genomes_project 5 168410669 168412179 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0073011.1 MGP_CBAJ_G0029576.1 mouse_genomes_project 5 124730801 124745012 - MGP_CBAJ_P0073011 Crybb2 protein_coding protein_coding MGP_CBAJ_T0073012.1 MGP_CBAJ_G0029576.1 mouse_genomes_project 5 124730808 124743661 - MGP_CBAJ_P0073012 Crybb2 protein_coding protein_coding MGP_CBAJ_T0073013.1 MGP_CBAJ_G0029576.1 mouse_genomes_project 5 124738031 124743352 - Crybb2 protein_coding processed_transcript MGP_CBAJ_T0073014.1 MGP_CBAJ_G0029576.1 mouse_genomes_project 5 124742948 124743666 - Crybb2 protein_coding processed_transcript MGP_CBAJ_T0073015.1 MGP_CBAJ_G0029576.1 mouse_genomes_project 5 124743586 124744389 - Crybb2 protein_coding processed_transcript MGP_CBAJ_T0075455.1 MGP_CBAJ_G0030036.1 mouse_genomes_project 5 163233058 163317941 - MGP_CBAJ_P0075455 protein_coding protein_coding MGP_CBAJ_T0004577.1 MGP_CBAJ_G0003961.1 mouse_genomes_project 5 32888389 32924506 - Gm36840 antisense antisense MGP_CBAJ_T0074274.1 MGP_CBAJ_G0029803.1 mouse_genomes_project 5 144714473 144747493 + MGP_CBAJ_P0074274 Crcp protein_coding protein_coding MGP_CBAJ_T0074275.1 MGP_CBAJ_G0029803.1 mouse_genomes_project 5 144714490 144747536 + Crcp protein_coding processed_transcript MGP_CBAJ_T0074276.1 MGP_CBAJ_G0029803.1 mouse_genomes_project 5 144714505 144747354 + Crcp protein_coding processed_transcript MGP_CBAJ_T0074277.1 MGP_CBAJ_G0029803.1 mouse_genomes_project 5 144714516 144748220 + MGP_CBAJ_P0074277 Crcp protein_coding protein_coding MGP_CBAJ_T0074278.1 MGP_CBAJ_G0029803.1 mouse_genomes_project 5 144729603 144747832 + Crcp protein_coding processed_transcript MGP_CBAJ_T0014779.1 MGP_CBAJ_G0012891.1 mouse_genomes_project 5 65672826 65673295 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014787.1 MGP_CBAJ_G0012899.1 mouse_genomes_project 5 68535896 68536761 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0073299.1 MGP_CBAJ_G0029633.1 mouse_genomes_project 5 127629190 127643461 + MGP_CBAJ_P0073299 Pla2g1b protein_coding protein_coding MGP_CBAJ_T0073300.1 MGP_CBAJ_G0029633.1 mouse_genomes_project 5 127629194 127643449 + Pla2g1b protein_coding processed_transcript MGP_CBAJ_T0073301.1 MGP_CBAJ_G0029633.1 mouse_genomes_project 5 127629194 127643475 + MGP_CBAJ_P0073301 Pla2g1b protein_coding protein_coding MGP_CBAJ_T0073302.1 MGP_CBAJ_G0029633.1 mouse_genomes_project 5 127629200 127643314 + MGP_CBAJ_P0073302 Pla2g1b protein_coding protein_coding MGP_CBAJ_T0073303.1 MGP_CBAJ_G0029633.1 mouse_genomes_project 5 127629200 127637647 + MGP_CBAJ_P0073303 Pla2g1b protein_coding protein_coding MGP_CBAJ_T0014665.1 MGP_CBAJ_G0012777.1 mouse_genomes_project 5 20253518 20254914 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0071352.1 MGP_CBAJ_G0029232.1 mouse_genomes_project 5 68105645 68200269 + MGP_CBAJ_P0071352 0610040J01Rik protein_coding protein_coding MGP_CBAJ_T0071353.1 MGP_CBAJ_G0029232.1 mouse_genomes_project 5 68105802 68199211 + MGP_CBAJ_P0071353 0610040J01Rik protein_coding protein_coding MGP_CBAJ_T0071354.1 MGP_CBAJ_G0029232.1 mouse_genomes_project 5 68173913 68198910 + MGP_CBAJ_P0071354 0610040J01Rik protein_coding protein_coding MGP_CBAJ_T0071355.1 MGP_CBAJ_G0029232.1 mouse_genomes_project 5 68175080 68199173 + MGP_CBAJ_P0071355 0610040J01Rik protein_coding protein_coding MGP_CBAJ_T0074599.1 MGP_CBAJ_G0029859.1 mouse_genomes_project 5 151501055 151509404 + MGP_CBAJ_P0074599 Zp3 protein_coding protein_coding MGP_CBAJ_T0074600.1 MGP_CBAJ_G0029859.1 mouse_genomes_project 5 151501124 151508072 + MGP_CBAJ_P0074600 Zp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0001565.1 MGP_CBAJ_G0001485.1 mouse_genomes_project 5 60977732 60987254 + TEC TEC MGP_CBAJ_T0073898.1 MGP_CBAJ_G0029739.1 mouse_genomes_project 5 137437952 137564493 - MGP_CBAJ_P0073898 Clip1 protein_coding protein_coding MGP_CBAJ_T0073899.1 MGP_CBAJ_G0029739.1 mouse_genomes_project 5 137437952 137564789 - MGP_CBAJ_P0073899 Clip1 protein_coding protein_coding MGP_CBAJ_T0073900.1 MGP_CBAJ_G0029739.1 mouse_genomes_project 5 137437964 137564446 - MGP_CBAJ_P0073900 Clip1 protein_coding protein_coding MGP_CBAJ_T0073901.1 MGP_CBAJ_G0029739.1 mouse_genomes_project 5 137437964 137515343 - MGP_CBAJ_P0073901 Clip1 protein_coding protein_coding MGP_CBAJ_T0073902.1 MGP_CBAJ_G0029739.1 mouse_genomes_project 5 137437975 137462744 - Clip1 protein_coding retained_intron MGP_CBAJ_T0073903.1 MGP_CBAJ_G0029739.1 mouse_genomes_project 5 137438024 137438711 - Clip1 protein_coding processed_transcript MGP_CBAJ_T0073904.1 MGP_CBAJ_G0029739.1 mouse_genomes_project 5 137438986 137564496 - MGP_CBAJ_P0073904 Clip1 protein_coding protein_coding MGP_CBAJ_T0073905.1 MGP_CBAJ_G0029739.1 mouse_genomes_project 5 137439227 137471111 - Clip1 protein_coding retained_intron MGP_CBAJ_T0073906.1 MGP_CBAJ_G0029739.1 mouse_genomes_project 5 137439397 137525282 - MGP_CBAJ_P0073906 Clip1 protein_coding protein_coding MGP_CBAJ_T0073907.1 MGP_CBAJ_G0029739.1 mouse_genomes_project 5 137439604 137476766 - MGP_CBAJ_P0073907 Clip1 protein_coding protein_coding MGP_CBAJ_T0073908.1 MGP_CBAJ_G0029739.1 mouse_genomes_project 5 137446304 137476407 - Clip1 protein_coding retained_intron MGP_CBAJ_T0073909.1 MGP_CBAJ_G0029739.1 mouse_genomes_project 5 137450180 137462653 - Clip1 protein_coding retained_intron MGP_CBAJ_T0073910.1 MGP_CBAJ_G0029739.1 mouse_genomes_project 5 137476600 137525172 - MGP_CBAJ_P0073910 Clip1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073911.1 MGP_CBAJ_G0029739.1 mouse_genomes_project 5 137476649 137538556 - MGP_CBAJ_P0073911 Clip1 protein_coding protein_coding MGP_CBAJ_T0073912.1 MGP_CBAJ_G0029739.1 mouse_genomes_project 5 137495695 137498385 - Clip1 protein_coding retained_intron MGP_CBAJ_T0075720.1 MGP_CBAJ_G0030092.1 mouse_genomes_project 5 170227040 170235527 - MGP_CBAJ_P0075720 Rfc3 protein_coding protein_coding MGP_CBAJ_T0075721.1 MGP_CBAJ_G0030092.1 mouse_genomes_project 5 170227103 170228416 - Rfc3 protein_coding retained_intron MGP_CBAJ_T0075722.1 MGP_CBAJ_G0030092.1 mouse_genomes_project 5 170227105 170229047 - Rfc3 protein_coding retained_intron MGP_CBAJ_T0075723.1 MGP_CBAJ_G0030092.1 mouse_genomes_project 5 170227108 170235487 - Rfc3 protein_coding retained_intron MGP_CBAJ_T0075724.1 MGP_CBAJ_G0030092.1 mouse_genomes_project 5 170228700 170235493 - Rfc3 protein_coding retained_intron MGP_CBAJ_T0075725.1 MGP_CBAJ_G0030092.1 mouse_genomes_project 5 170231251 170235480 - Rfc3 protein_coding retained_intron MGP_CBAJ_T0075726.1 MGP_CBAJ_G0030092.1 mouse_genomes_project 5 170233851 170235512 - Rfc3 protein_coding retained_intron MGP_CBAJ_T0011467.1 MGP_CBAJ_G0009605.1 mouse_genomes_project 5 71002952 71003275 - Gm23183 misc_RNA misc_RNA MGP_CBAJ_T0072014.1 MGP_CBAJ_G0029352.1 mouse_genomes_project 5 94914385 94942649 - MGP_CBAJ_P0072014 Ugt2a2 protein_coding protein_coding MGP_CBAJ_T0001555.1 MGP_CBAJ_G0001475.1 mouse_genomes_project 5 54804194 54806639 - TEC TEC MGP_CBAJ_T0004584.1 MGP_CBAJ_G0003968.1 mouse_genomes_project 5 36004194 36005770 - Gm43791 antisense antisense MGP_CBAJ_T0069924.1 MGP_CBAJ_G0028989.1 mouse_genomes_project 5 21123930 21632446 - MGP_CBAJ_P0069924 Reln protein_coding protein_coding MGP_CBAJ_T0069925.1 MGP_CBAJ_G0028989.1 mouse_genomes_project 5 21124371 21137122 - Reln protein_coding processed_transcript MGP_CBAJ_T0069926.1 MGP_CBAJ_G0028989.1 mouse_genomes_project 5 21124726 21632434 - MGP_CBAJ_P0069926 Reln protein_coding protein_coding MGP_CBAJ_T0069927.1 MGP_CBAJ_G0028989.1 mouse_genomes_project 5 21131613 21134944 - Reln protein_coding retained_intron MGP_CBAJ_T0069928.1 MGP_CBAJ_G0028989.1 mouse_genomes_project 5 21135952 21140100 - Reln protein_coding processed_transcript MGP_CBAJ_T0069929.1 MGP_CBAJ_G0028989.1 mouse_genomes_project 5 21136686 21137042 - Reln protein_coding retained_intron MGP_CBAJ_T0069930.1 MGP_CBAJ_G0028989.1 mouse_genomes_project 5 21139777 21188506 - Reln protein_coding retained_intron MGP_CBAJ_T0069931.1 MGP_CBAJ_G0028989.1 mouse_genomes_project 5 21237420 21273132 - Reln protein_coding retained_intron MGP_CBAJ_T0069932.1 MGP_CBAJ_G0028989.1 mouse_genomes_project 5 21265907 21632434 - Reln protein_coding retained_intron MGP_CBAJ_T0069933.1 MGP_CBAJ_G0028989.1 mouse_genomes_project 5 21320177 21321407 - Reln protein_coding retained_intron MGP_CBAJ_T0069934.1 MGP_CBAJ_G0028989.1 mouse_genomes_project 5 21332956 21413208 - MGP_CBAJ_P0069934 Reln protein_coding nonsense_mediated_decay MGP_CBAJ_T0069935.1 MGP_CBAJ_G0028989.1 mouse_genomes_project 5 21406611 21632434 - Reln protein_coding retained_intron MGP_CBAJ_T0069936.1 MGP_CBAJ_G0028989.1 mouse_genomes_project 5 21448572 21632434 - Reln protein_coding retained_intron MGP_CBAJ_T0069937.1 MGP_CBAJ_G0028989.1 mouse_genomes_project 5 21499079 21632434 - Reln protein_coding retained_intron MGP_CBAJ_T0069938.1 MGP_CBAJ_G0028989.1 mouse_genomes_project 5 21629814 21632446 - Reln protein_coding processed_transcript MGP_CBAJ_T0075219.1 MGP_CBAJ_G0029986.1 mouse_genomes_project 5 159897680 159901160 - MGP_CBAJ_P0075219 Actb protein_coding protein_coding MGP_CBAJ_T0075220.1 MGP_CBAJ_G0029986.1 mouse_genomes_project 5 159897684 159901108 - MGP_CBAJ_P0075220 Actb protein_coding protein_coding MGP_CBAJ_T0075221.1 MGP_CBAJ_G0029986.1 mouse_genomes_project 5 159898764 159900235 - MGP_CBAJ_P0075221 Actb protein_coding protein_coding MGP_CBAJ_T0075222.1 MGP_CBAJ_G0029986.1 mouse_genomes_project 5 159898808 159901131 - Actb protein_coding processed_transcript MGP_CBAJ_T0075223.1 MGP_CBAJ_G0029986.1 mouse_genomes_project 5 159899085 159901128 - MGP_CBAJ_P0075223 Actb protein_coding protein_coding MGP_CBAJ_T0075224.1 MGP_CBAJ_G0029986.1 mouse_genomes_project 5 159899118 159900351 - MGP_CBAJ_P0075224 Actb protein_coding protein_coding MGP_CBAJ_T0075225.1 MGP_CBAJ_G0029986.1 mouse_genomes_project 5 159899179 159901078 - Actb protein_coding retained_intron MGP_CBAJ_T0075226.1 MGP_CBAJ_G0029986.1 mouse_genomes_project 5 159899286 159901100 - Actb protein_coding retained_intron MGP_CBAJ_T0001468.1 MGP_CBAJ_G0001389.1 mouse_genomes_project 5 35364998 35368530 + TEC TEC MGP_CBAJ_T0017954.1 MGP_CBAJ_G0015361.1 mouse_genomes_project 5 168243664 168261028 + 4930500F04Rik processed_transcript lincRNA MGP_CBAJ_T0017955.1 MGP_CBAJ_G0015361.1 mouse_genomes_project 5 168243882 168261024 + 4930500F04Rik processed_transcript lincRNA MGP_CBAJ_T0017956.1 MGP_CBAJ_G0015361.1 mouse_genomes_project 5 168249044 168251151 + 4930500F04Rik processed_transcript retained_intron MGP_CBAJ_T0004713.1 MGP_CBAJ_G0004063.1 mouse_genomes_project 5 128550667 128551601 + Gm13837 antisense antisense MGP_CBAJ_T0004761.1 MGP_CBAJ_G0004094.1 mouse_genomes_project 5 142787106 142793105 + Gm42817 antisense antisense MGP_CBAJ_T0074660.1 MGP_CBAJ_G0029870.1 mouse_genomes_project 5 151832828 151956806 - MGP_CBAJ_P0074660 Cux1 protein_coding protein_coding MGP_CBAJ_T0074661.1 MGP_CBAJ_G0029870.1 mouse_genomes_project 5 151832828 152175309 - MGP_CBAJ_P0074661 Cux1 protein_coding protein_coding MGP_CBAJ_T0074662.1 MGP_CBAJ_G0029870.1 mouse_genomes_project 5 151832828 152175325 - MGP_CBAJ_P0074662 Cux1 protein_coding protein_coding MGP_CBAJ_T0074663.1 MGP_CBAJ_G0029870.1 mouse_genomes_project 5 151833203 152175339 - MGP_CBAJ_P0074663 Cux1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074664.1 MGP_CBAJ_G0029870.1 mouse_genomes_project 5 151835189 152175324 - MGP_CBAJ_P0074664 Cux1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074665.1 MGP_CBAJ_G0029870.1 mouse_genomes_project 5 151859156 152175506 - MGP_CBAJ_P0074665 Cux1 protein_coding protein_coding MGP_CBAJ_T0074666.1 MGP_CBAJ_G0029870.1 mouse_genomes_project 5 151861121 152175307 - MGP_CBAJ_P0074666 Cux1 protein_coding protein_coding MGP_CBAJ_T0074667.1 MGP_CBAJ_G0029870.1 mouse_genomes_project 5 151867254 152174401 - MGP_CBAJ_P0074667 Cux1 protein_coding protein_coding MGP_CBAJ_T0074668.1 MGP_CBAJ_G0029870.1 mouse_genomes_project 5 151867285 152173482 - MGP_CBAJ_P0074668 Cux1 protein_coding protein_coding MGP_CBAJ_T0074669.1 MGP_CBAJ_G0029870.1 mouse_genomes_project 5 151867292 151895280 - Cux1 protein_coding processed_transcript MGP_CBAJ_T0074670.1 MGP_CBAJ_G0029870.1 mouse_genomes_project 5 151867590 152175280 - MGP_CBAJ_P0074670 Cux1 protein_coding protein_coding MGP_CBAJ_T0074671.1 MGP_CBAJ_G0029870.1 mouse_genomes_project 5 151905900 151960044 - MGP_CBAJ_P0074671 Cux1 protein_coding protein_coding MGP_CBAJ_T0074672.1 MGP_CBAJ_G0029870.1 mouse_genomes_project 5 151959086 152175313 - Cux1 protein_coding retained_intron MGP_CBAJ_T0074673.1 MGP_CBAJ_G0029870.1 mouse_genomes_project 5 152083161 152175551 - Cux1 protein_coding retained_intron MGP_CBAJ_T0073404.1 MGP_CBAJ_G0029648.1 mouse_genomes_project 5 129762002 129766430 - MGP_CBAJ_P0073404 Pebp1 protein_coding protein_coding MGP_CBAJ_T0073405.1 MGP_CBAJ_G0029648.1 mouse_genomes_project 5 129762093 129766453 - MGP_CBAJ_P0073405 Pebp1 protein_coding unknown_likely_coding MGP_CBAJ_T0073406.1 MGP_CBAJ_G0029648.1 mouse_genomes_project 5 129762187 129766415 - MGP_CBAJ_P0073406 Pebp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073407.1 MGP_CBAJ_G0029648.1 mouse_genomes_project 5 129764637 129766372 - Pebp1 protein_coding retained_intron MGP_CBAJ_T0014990.1 MGP_CBAJ_G0013102.1 mouse_genomes_project 5 165799000 165799494 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0071818.1 MGP_CBAJ_G0029310.1 mouse_genomes_project 5 82009231 82022233 + Tmem165 protein_coding processed_transcript MGP_CBAJ_T0071819.1 MGP_CBAJ_G0029310.1 mouse_genomes_project 5 82009296 82033798 + MGP_CBAJ_P0071819 Tmem165 protein_coding protein_coding MGP_CBAJ_T0071820.1 MGP_CBAJ_G0029310.1 mouse_genomes_project 5 82024652 82030363 + Tmem165 protein_coding retained_intron MGP_CBAJ_T0071821.1 MGP_CBAJ_G0029310.1 mouse_genomes_project 5 82029327 82031245 + Tmem165 protein_coding processed_transcript MGP_CBAJ_T0072168.1 MGP_CBAJ_G0029395.1 mouse_genomes_project 5 98792608 98794729 + Cxcl5 protein_coding retained_intron MGP_CBAJ_T0072169.1 MGP_CBAJ_G0029395.1 mouse_genomes_project 5 98792626 98794729 + MGP_CBAJ_P0072169 Cxcl5 protein_coding protein_coding MGP_CBAJ_T0074953.1 MGP_CBAJ_G0029929.1 mouse_genomes_project 5 154455128 154459088 + MGP_CBAJ_P0074953 Lamtor4 protein_coding protein_coding MGP_CBAJ_T0074954.1 MGP_CBAJ_G0029929.1 mouse_genomes_project 5 154455477 154459091 + Lamtor4 protein_coding processed_transcript MGP_CBAJ_T0004712.1 MGP_CBAJ_G0004062.1 mouse_genomes_project 5 128536762 128548010 + Gm14507 antisense antisense MGP_CBAJ_T0004802.1 MGP_CBAJ_G0004124.1 mouse_genomes_project 5 161045305 161108491 - Gm17135 antisense antisense MGP_CBAJ_T0008018.1 MGP_CBAJ_G0006527.1 mouse_genomes_project 5 46328153 46348165 - Gm42985 lincRNA lincRNA MGP_CBAJ_T0004700.1 MGP_CBAJ_G0004053.1 mouse_genomes_project 5 125610817 125611333 + Gm17122 antisense antisense MGP_CBAJ_T0069723.1 MGP_CBAJ_G0028945.1 mouse_genomes_project 5 6008222 6047903 + MGP_CBAJ_P0069723 Slc25a40 protein_coding protein_coding MGP_CBAJ_T0069724.1 MGP_CBAJ_G0028945.1 mouse_genomes_project 5 6008230 6014007 + Slc25a40 protein_coding retained_intron MGP_CBAJ_T0069725.1 MGP_CBAJ_G0028945.1 mouse_genomes_project 5 6008230 6047895 + MGP_CBAJ_P0069725 Slc25a40 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069726.1 MGP_CBAJ_G0028945.1 mouse_genomes_project 5 6008245 6047860 + Slc25a40 protein_coding retained_intron MGP_CBAJ_T0069727.1 MGP_CBAJ_G0028945.1 mouse_genomes_project 5 6008271 6047842 + MGP_CBAJ_P0069727 Slc25a40 protein_coding protein_coding MGP_CBAJ_T0069728.1 MGP_CBAJ_G0028945.1 mouse_genomes_project 5 6010204 6030612 + MGP_CBAJ_P0069728 Slc25a40 protein_coding protein_coding MGP_CBAJ_T0069729.1 MGP_CBAJ_G0028945.1 mouse_genomes_project 5 6016798 6017220 + Slc25a40 protein_coding retained_intron MGP_CBAJ_T0069730.1 MGP_CBAJ_G0028945.1 mouse_genomes_project 5 6031942 6040472 + Slc25a40 protein_coding retained_intron MGP_CBAJ_T0098410.1 MGP_CBAJ_G0036676.1 mouse_genomes_project 5 101073713 101074951 + Gm20500 sense_intronic sense_intronic MGP_CBAJ_T0014829.1 MGP_CBAJ_G0012941.1 mouse_genomes_project 5 94366436 94368029 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0073338.1 MGP_CBAJ_G0029639.1 mouse_genomes_project 5 127835400 127924243 - MGP_CBAJ_P0073338 Ccdc64 protein_coding unknown_likely_coding MGP_CBAJ_T0073339.1 MGP_CBAJ_G0029639.1 mouse_genomes_project 5 127835407 127837027 - Ccdc64 protein_coding retained_intron MGP_CBAJ_T0073340.1 MGP_CBAJ_G0029639.1 mouse_genomes_project 5 127835407 127924374 - MGP_CBAJ_P0073340 Ccdc64 protein_coding protein_coding MGP_CBAJ_T0073341.1 MGP_CBAJ_G0029639.1 mouse_genomes_project 5 127835409 127840219 - MGP_CBAJ_P0073341 Ccdc64 protein_coding protein_coding MGP_CBAJ_T0073342.1 MGP_CBAJ_G0029639.1 mouse_genomes_project 5 127835412 127840214 - MGP_CBAJ_P0073342 Ccdc64 protein_coding protein_coding MGP_CBAJ_T0073343.1 MGP_CBAJ_G0029639.1 mouse_genomes_project 5 127836499 127840219 - MGP_CBAJ_P0073343 Ccdc64 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073344.1 MGP_CBAJ_G0029639.1 mouse_genomes_project 5 127839051 127860790 - MGP_CBAJ_P0073344 Ccdc64 protein_coding protein_coding MGP_CBAJ_T0073345.1 MGP_CBAJ_G0029639.1 mouse_genomes_project 5 127847423 127861056 - Ccdc64 protein_coding retained_intron MGP_CBAJ_T0073346.1 MGP_CBAJ_G0029639.1 mouse_genomes_project 5 127857779 127909312 - Ccdc64 protein_coding processed_transcript MGP_CBAJ_T0073347.1 MGP_CBAJ_G0029639.1 mouse_genomes_project 5 127860710 127924120 - MGP_CBAJ_P0073347 Ccdc64 protein_coding protein_coding MGP_CBAJ_T0073348.1 MGP_CBAJ_G0029639.1 mouse_genomes_project 5 127917216 127924181 - Ccdc64 protein_coding retained_intron MGP_CBAJ_T0072428.1 MGP_CBAJ_G0029455.1 mouse_genomes_project 5 109839688 109911594 - MGP_CBAJ_P0072428 Lin54 protein_coding protein_coding MGP_CBAJ_T0072429.1 MGP_CBAJ_G0029455.1 mouse_genomes_project 5 109839698 109906517 - MGP_CBAJ_P0072429 Lin54 protein_coding protein_coding MGP_CBAJ_T0072430.1 MGP_CBAJ_G0029455.1 mouse_genomes_project 5 109839803 109906559 - MGP_CBAJ_P0072430 Lin54 protein_coding protein_coding MGP_CBAJ_T0072431.1 MGP_CBAJ_G0029455.1 mouse_genomes_project 5 109839803 109911630 - MGP_CBAJ_P0072431 Lin54 protein_coding protein_coding MGP_CBAJ_T0072432.1 MGP_CBAJ_G0029455.1 mouse_genomes_project 5 109839812 109906504 - MGP_CBAJ_P0072432 Lin54 protein_coding protein_coding MGP_CBAJ_T0072433.1 MGP_CBAJ_G0029455.1 mouse_genomes_project 5 109839970 109911643 - MGP_CBAJ_P0072433 Lin54 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072434.1 MGP_CBAJ_G0029455.1 mouse_genomes_project 5 109841322 109906449 - MGP_CBAJ_P0072434 Lin54 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072435.1 MGP_CBAJ_G0029455.1 mouse_genomes_project 5 109841322 109906449 - MGP_CBAJ_P0072435 Lin54 protein_coding protein_coding MGP_CBAJ_T0072436.1 MGP_CBAJ_G0029455.1 mouse_genomes_project 5 109861680 109893472 - MGP_CBAJ_P0072436 Lin54 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072437.1 MGP_CBAJ_G0029455.1 mouse_genomes_project 5 109892389 109906504 - Lin54 protein_coding retained_intron MGP_CBAJ_T0004797.1 MGP_CBAJ_G0004121.1 mouse_genomes_project 5 158363276 158378457 - Gm16036 antisense antisense MGP_CBAJ_T0072148.1 MGP_CBAJ_G0029389.1 mouse_genomes_project 5 98347897 98349189 + MGP_CBAJ_P0072148 Gm9958 protein_coding protein_coding MGP_CBAJ_T0001700.1 MGP_CBAJ_G0001618.1 mouse_genomes_project 5 113087140 113088276 + TEC TEC MGP_CBAJ_T0008370.1 MGP_CBAJ_G0006778.1 mouse_genomes_project 5 168294481 168295472 - Gm43452 lincRNA lincRNA MGP_CBAJ_T0010545.1 MGP_CBAJ_G0008683.1 mouse_genomes_project 5 30421939 30422017 + Mir1960 miRNA miRNA MGP_CBAJ_T0074351.1 MGP_CBAJ_G0029818.1 mouse_genomes_project 5 149413075 149425310 - MGP_CBAJ_P0074351 Ncf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074352.1 MGP_CBAJ_G0029818.1 mouse_genomes_project 5 149413282 149425310 - MGP_CBAJ_P0074352 Ncf1 protein_coding protein_coding MGP_CBAJ_T0074353.1 MGP_CBAJ_G0029818.1 mouse_genomes_project 5 149413282 149425310 - MGP_CBAJ_P0074353 Ncf1 protein_coding protein_coding MGP_CBAJ_T0074354.1 MGP_CBAJ_G0029818.1 mouse_genomes_project 5 149413282 149425310 - MGP_CBAJ_P0074354 Ncf1 protein_coding protein_coding MGP_CBAJ_T0074355.1 MGP_CBAJ_G0029818.1 mouse_genomes_project 5 149414394 149415245 - Ncf1 protein_coding retained_intron MGP_CBAJ_T0074356.1 MGP_CBAJ_G0029818.1 mouse_genomes_project 5 149416468 149421413 - Ncf1 protein_coding retained_intron MGP_CBAJ_T0074357.1 MGP_CBAJ_G0029818.1 mouse_genomes_project 5 149418740 149420834 - Ncf1 protein_coding retained_intron MGP_CBAJ_T0004783.1 MGP_CBAJ_G0004113.1 mouse_genomes_project 5 153855341 153856871 + antisense antisense MGP_CBAJ_T0001701.1 MGP_CBAJ_G0001619.1 mouse_genomes_project 5 113669526 113669843 - TEC TEC MGP_CBAJ_T0014685.1 MGP_CBAJ_G0012797.1 mouse_genomes_project 5 23640902 23641387 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0070633.1 MGP_CBAJ_G0029113.1 mouse_genomes_project 5 34188041 34191284 - MGP_CBAJ_P0070633 Nkx1-1 protein_coding protein_coding MGP_CBAJ_T0101947.1 MGP_CBAJ_G0039978.1 mouse_genomes_project 5 104156404 104160389 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0008150.1 MGP_CBAJ_G0006631.1 mouse_genomes_project 5 116591387 116593203 + Gm42916 lincRNA lincRNA MGP_CBAJ_T0001758.1 MGP_CBAJ_G0001676.1 mouse_genomes_project 5 133208400 133209534 + TEC TEC MGP_CBAJ_T0072749.1 MGP_CBAJ_G0029522.1 mouse_genomes_project 5 118964380 118972307 - MGP_CBAJ_P0072749 Mfsd7a protein_coding protein_coding MGP_CBAJ_T0075313.1 MGP_CBAJ_G0030006.1 mouse_genomes_project 5 161025106 161032244 - MGP_CBAJ_P0075313 Aimp2 protein_coding protein_coding MGP_CBAJ_T0075314.1 MGP_CBAJ_G0030006.1 mouse_genomes_project 5 161025106 161032252 - MGP_CBAJ_P0075314 Aimp2 protein_coding protein_coding MGP_CBAJ_T0075315.1 MGP_CBAJ_G0030006.1 mouse_genomes_project 5 161028490 161032189 - Aimp2 protein_coding retained_intron MGP_CBAJ_T0075316.1 MGP_CBAJ_G0030006.1 mouse_genomes_project 5 161028775 161032193 - Aimp2 protein_coding retained_intron MGP_CBAJ_T0004685.1 MGP_CBAJ_G0004041.1 mouse_genomes_project 5 119329639 119337171 + 1700047L14Rik antisense antisense MGP_CBAJ_T0072501.1 MGP_CBAJ_G0029468.1 mouse_genomes_project 5 112605482 112929417 - MGP_CBAJ_P0072501 Mapk10 protein_coding protein_coding MGP_CBAJ_T0072502.1 MGP_CBAJ_G0029468.1 mouse_genomes_project 5 112605484 112817340 - MGP_CBAJ_P0072502 Mapk10 protein_coding protein_coding MGP_CBAJ_T0072503.1 MGP_CBAJ_G0029468.1 mouse_genomes_project 5 112605484 112929417 - MGP_CBAJ_P0072503 Mapk10 protein_coding protein_coding MGP_CBAJ_T0072504.1 MGP_CBAJ_G0029468.1 mouse_genomes_project 5 112605484 112770744 - MGP_CBAJ_P0072504 Mapk10 protein_coding protein_coding MGP_CBAJ_T0072505.1 MGP_CBAJ_G0029468.1 mouse_genomes_project 5 112610672 112924013 - MGP_CBAJ_P0072505 Mapk10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072506.1 MGP_CBAJ_G0029468.1 mouse_genomes_project 5 112617821 112929356 - MGP_CBAJ_P0072506 Mapk10 protein_coding protein_coding MGP_CBAJ_T0072507.1 MGP_CBAJ_G0029468.1 mouse_genomes_project 5 112693779 112735567 - MGP_CBAJ_P0072507 Mapk10 protein_coding protein_coding MGP_CBAJ_T0072508.1 MGP_CBAJ_G0029468.1 mouse_genomes_project 5 112694089 112929417 - MGP_CBAJ_P0072508 Mapk10 protein_coding protein_coding MGP_CBAJ_T0072509.1 MGP_CBAJ_G0029468.1 mouse_genomes_project 5 112879814 112929367 - Mapk10 protein_coding processed_transcript MGP_CBAJ_T0072510.1 MGP_CBAJ_G0029468.1 mouse_genomes_project 5 112923906 112927096 - Mapk10 protein_coding processed_transcript MGP_CBAJ_T0072511.1 MGP_CBAJ_G0029468.1 mouse_genomes_project 5 112923910 112929417 - Mapk10 protein_coding processed_transcript MGP_CBAJ_T0072512.1 MGP_CBAJ_G0029468.1 mouse_genomes_project 5 112927034 112928954 - Mapk10 protein_coding processed_transcript MGP_CBAJ_T0100619.1 MGP_CBAJ_G0038874.1 mouse_genomes_project 5 85011186 85011322 + Gm25756 snoRNA snoRNA MGP_CBAJ_T0010554.1 MGP_CBAJ_G0008692.1 mouse_genomes_project 5 50549593 50549703 + Mir218-1 miRNA miRNA MGP_CBAJ_T0072817.1 MGP_CBAJ_G0029540.1 mouse_genomes_project 5 121378336 121382212 + MGP_CBAJ_P0072817 Plcxd1 protein_coding protein_coding MGP_CBAJ_T0072818.1 MGP_CBAJ_G0029540.1 mouse_genomes_project 5 121378789 121380277 + MGP_CBAJ_P0072818 Plcxd1 protein_coding protein_coding MGP_CBAJ_T0072819.1 MGP_CBAJ_G0029540.1 mouse_genomes_project 5 121378926 121384345 + MGP_CBAJ_P0072819 Plcxd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072820.1 MGP_CBAJ_G0029540.1 mouse_genomes_project 5 121379601 121384350 + Plcxd1 protein_coding processed_transcript MGP_CBAJ_T0070414.1 MGP_CBAJ_G0029081.1 mouse_genomes_project 5 31551651 31557532 - MGP_CBAJ_P0070414 Eif2b4 protein_coding protein_coding MGP_CBAJ_T0070415.1 MGP_CBAJ_G0029081.1 mouse_genomes_project 5 31551652 31557241 - MGP_CBAJ_P0070415 Eif2b4 protein_coding protein_coding MGP_CBAJ_T0070416.1 MGP_CBAJ_G0029081.1 mouse_genomes_project 5 31551660 31557110 - MGP_CBAJ_P0070416 Eif2b4 protein_coding protein_coding MGP_CBAJ_T0070417.1 MGP_CBAJ_G0029081.1 mouse_genomes_project 5 31551661 31557116 - MGP_CBAJ_P0070417 Eif2b4 protein_coding protein_coding MGP_CBAJ_T0070418.1 MGP_CBAJ_G0029081.1 mouse_genomes_project 5 31551662 31555742 - MGP_CBAJ_P0070418 Eif2b4 protein_coding protein_coding MGP_CBAJ_T0070419.1 MGP_CBAJ_G0029081.1 mouse_genomes_project 5 31553496 31554956 - Eif2b4 protein_coding retained_intron MGP_CBAJ_T0070420.1 MGP_CBAJ_G0029081.1 mouse_genomes_project 5 31553663 31554011 - MGP_CBAJ_P0070420 Eif2b4 protein_coding protein_coding MGP_CBAJ_T0070421.1 MGP_CBAJ_G0029081.1 mouse_genomes_project 5 31553683 31555246 - MGP_CBAJ_P0070421 Eif2b4 protein_coding protein_coding MGP_CBAJ_T0070422.1 MGP_CBAJ_G0029081.1 mouse_genomes_project 5 31554492 31555294 - MGP_CBAJ_P0070422 Eif2b4 protein_coding protein_coding MGP_CBAJ_T0070423.1 MGP_CBAJ_G0029081.1 mouse_genomes_project 5 31555294 31557241 - Eif2b4 protein_coding processed_transcript MGP_CBAJ_T0070424.1 MGP_CBAJ_G0029081.1 mouse_genomes_project 5 31555424 31557101 - Eif2b4 protein_coding retained_intron MGP_CBAJ_T0070425.1 MGP_CBAJ_G0029081.1 mouse_genomes_project 5 31555812 31557520 - MGP_CBAJ_P0070425 Eif2b4 protein_coding protein_coding MGP_CBAJ_T0004582.1 MGP_CBAJ_G0003966.1 mouse_genomes_project 5 35574964 35576724 + Gm15522 antisense antisense MGP_CBAJ_T0071697.1 MGP_CBAJ_G0029291.1 mouse_genomes_project 5 78446953 78454751 + MGP_CBAJ_P0071697 Slc10a4 protein_coding protein_coding MGP_CBAJ_T0071453.1 MGP_CBAJ_G0029251.1 mouse_genomes_project 5 70162944 70270807 - MGP_CBAJ_P0071453 Pds5a protein_coding protein_coding MGP_CBAJ_T0071454.1 MGP_CBAJ_G0029251.1 mouse_genomes_project 5 70162946 70169259 - Pds5a protein_coding retained_intron MGP_CBAJ_T0071455.1 MGP_CBAJ_G0029251.1 mouse_genomes_project 5 70164995 70178097 - MGP_CBAJ_P0071455 Pds5a protein_coding protein_coding MGP_CBAJ_T0071456.1 MGP_CBAJ_G0029251.1 mouse_genomes_project 5 70167676 70270490 - MGP_CBAJ_P0071456 Pds5a protein_coding unknown_likely_coding MGP_CBAJ_T0071457.1 MGP_CBAJ_G0029251.1 mouse_genomes_project 5 70172746 70270495 - MGP_CBAJ_P0071457 Pds5a protein_coding protein_coding MGP_CBAJ_T0071458.1 MGP_CBAJ_G0029251.1 mouse_genomes_project 5 70172902 70180045 - Pds5a protein_coding retained_intron MGP_CBAJ_T0071459.1 MGP_CBAJ_G0029251.1 mouse_genomes_project 5 70180366 70209684 - Pds5a protein_coding retained_intron MGP_CBAJ_T0071460.1 MGP_CBAJ_G0029251.1 mouse_genomes_project 5 70180381 70187825 - Pds5a protein_coding retained_intron MGP_CBAJ_T0071461.1 MGP_CBAJ_G0029251.1 mouse_genomes_project 5 70180842 70188843 - Pds5a protein_coding retained_intron MGP_CBAJ_T0071462.1 MGP_CBAJ_G0029251.1 mouse_genomes_project 5 70183139 70189274 - Pds5a protein_coding retained_intron MGP_CBAJ_T0071463.1 MGP_CBAJ_G0029251.1 mouse_genomes_project 5 70196968 70198143 - Pds5a protein_coding retained_intron MGP_CBAJ_T0071464.1 MGP_CBAJ_G0029251.1 mouse_genomes_project 5 70201308 70204369 - Pds5a protein_coding retained_intron MGP_CBAJ_T0071465.1 MGP_CBAJ_G0029251.1 mouse_genomes_project 5 70205226 70270912 - Pds5a protein_coding retained_intron MGP_CBAJ_T0071466.1 MGP_CBAJ_G0029251.1 mouse_genomes_project 5 70213339 70214489 - Pds5a protein_coding retained_intron MGP_CBAJ_T0071467.1 MGP_CBAJ_G0029251.1 mouse_genomes_project 5 70232535 70269504 - Pds5a protein_coding retained_intron MGP_CBAJ_T0001627.1 MGP_CBAJ_G0001546.1 mouse_genomes_project 5 72451639 72453277 - TEC TEC MGP_CBAJ_T0074902.1 MGP_CBAJ_G0029918.1 mouse_genomes_project 5 154073647 154075231 + MGP_CBAJ_P0074902 protein_coding protein_coding MGP_CBAJ_T0071059.1 MGP_CBAJ_G0029180.1 mouse_genomes_project 5 39809962 39845007 - MGP_CBAJ_P0071059 Wdr1 protein_coding protein_coding MGP_CBAJ_T0071060.1 MGP_CBAJ_G0029180.1 mouse_genomes_project 5 39810727 39813274 - Wdr1 protein_coding retained_intron MGP_CBAJ_T0071061.1 MGP_CBAJ_G0029180.1 mouse_genomes_project 5 39810734 39844836 - MGP_CBAJ_P0071061 Wdr1 protein_coding protein_coding MGP_CBAJ_T0071062.1 MGP_CBAJ_G0029180.1 mouse_genomes_project 5 39810868 39813162 - Wdr1 protein_coding retained_intron MGP_CBAJ_T0071063.1 MGP_CBAJ_G0029180.1 mouse_genomes_project 5 39812342 39812998 - Wdr1 protein_coding retained_intron MGP_CBAJ_T0071064.1 MGP_CBAJ_G0029180.1 mouse_genomes_project 5 39813115 39815145 - Wdr1 protein_coding processed_transcript MGP_CBAJ_T0071065.1 MGP_CBAJ_G0029180.1 mouse_genomes_project 5 39823361 39844751 - Wdr1 protein_coding retained_intron MGP_CBAJ_T0071066.1 MGP_CBAJ_G0029180.1 mouse_genomes_project 5 39828878 39846424 - Wdr1 protein_coding processed_transcript MGP_CBAJ_T0071067.1 MGP_CBAJ_G0029180.1 mouse_genomes_project 5 39834428 39845007 - Wdr1 protein_coding retained_intron MGP_CBAJ_T0071068.1 MGP_CBAJ_G0029180.1 mouse_genomes_project 5 39840833 39844744 - Wdr1 protein_coding retained_intron MGP_CBAJ_T0071069.1 MGP_CBAJ_G0029180.1 mouse_genomes_project 5 39844109 39844776 - Wdr1 protein_coding retained_intron MGP_CBAJ_T0098401.1 MGP_CBAJ_G0036667.1 mouse_genomes_project 5 2557289 2559883 - Gm43728 sense_intronic sense_intronic MGP_CBAJ_T0072935.1 MGP_CBAJ_G0029558.1 mouse_genomes_project 5 122192311 122205518 - MGP_CBAJ_P0072935 Hscb protein_coding protein_coding MGP_CBAJ_T0072936.1 MGP_CBAJ_G0029558.1 mouse_genomes_project 5 122192321 122205316 - MGP_CBAJ_P0072936 Hscb protein_coding protein_coding MGP_CBAJ_T0072937.1 MGP_CBAJ_G0029558.1 mouse_genomes_project 5 122192321 122202147 - MGP_CBAJ_P0072937 Hscb protein_coding nonsense_mediated_decay MGP_CBAJ_T0072938.1 MGP_CBAJ_G0029558.1 mouse_genomes_project 5 122192322 122200723 - Hscb protein_coding retained_intron MGP_CBAJ_T0069666.1 MGP_CBAJ_G0028937.1 mouse_genomes_project 5 2946684 2983774 - MGP_CBAJ_P0069666 Steap2 protein_coding protein_coding MGP_CBAJ_T0069667.1 MGP_CBAJ_G0028937.1 mouse_genomes_project 5 2946686 2966783 - MGP_CBAJ_P0069667 Steap2 protein_coding protein_coding MGP_CBAJ_T0069668.1 MGP_CBAJ_G0028937.1 mouse_genomes_project 5 2947809 2983256 - MGP_CBAJ_P0069668 Steap2 protein_coding protein_coding MGP_CBAJ_T0069669.1 MGP_CBAJ_G0028937.1 mouse_genomes_project 5 2954415 2983248 - MGP_CBAJ_P0069669 Steap2 protein_coding protein_coding MGP_CBAJ_T0069670.1 MGP_CBAJ_G0028937.1 mouse_genomes_project 5 2954968 2983263 - MGP_CBAJ_P0069670 Steap2 protein_coding protein_coding MGP_CBAJ_T0069671.1 MGP_CBAJ_G0028937.1 mouse_genomes_project 5 2955202 2960763 - Steap2 protein_coding processed_transcript MGP_CBAJ_T0069672.1 MGP_CBAJ_G0028937.1 mouse_genomes_project 5 2955207 2983256 - MGP_CBAJ_P0069672 Steap2 protein_coding protein_coding MGP_CBAJ_T0069673.1 MGP_CBAJ_G0028937.1 mouse_genomes_project 5 2956982 2983522 - MGP_CBAJ_P0069673 Steap2 protein_coding protein_coding MGP_CBAJ_T0069674.1 MGP_CBAJ_G0028937.1 mouse_genomes_project 5 2959572 2983729 - Steap2 protein_coding retained_intron MGP_CBAJ_T0071488.1 MGP_CBAJ_G0029255.1 mouse_genomes_project 5 70603976 70616249 - 9130230L23Rik protein_coding retained_intron MGP_CBAJ_T0071489.1 MGP_CBAJ_G0029255.1 mouse_genomes_project 5 70612498 70636144 - MGP_CBAJ_P0071489 9130230L23Rik protein_coding protein_coding MGP_CBAJ_T0071490.1 MGP_CBAJ_G0029255.1 mouse_genomes_project 5 70612845 70629578 - MGP_CBAJ_P0071490 9130230L23Rik protein_coding protein_coding MGP_CBAJ_T0071491.1 MGP_CBAJ_G0029255.1 mouse_genomes_project 5 70615332 70617354 - 9130230L23Rik protein_coding retained_intron MGP_CBAJ_T0071492.1 MGP_CBAJ_G0029255.1 mouse_genomes_project 5 70616367 70630693 - 9130230L23Rik protein_coding retained_intron MGP_CBAJ_T0071493.1 MGP_CBAJ_G0029255.1 mouse_genomes_project 5 70629037 70636144 - 9130230L23Rik protein_coding retained_intron MGP_CBAJ_T0071494.1 MGP_CBAJ_G0029255.1 mouse_genomes_project 5 70630422 70631152 - 9130230L23Rik protein_coding retained_intron MGP_CBAJ_T0008083.1 MGP_CBAJ_G0006581.1 mouse_genomes_project 5 88833826 88836129 - 1700031L13Rik lincRNA lincRNA MGP_CBAJ_T0008084.1 MGP_CBAJ_G0006581.1 mouse_genomes_project 5 88833845 88836132 - 1700031L13Rik lincRNA lincRNA MGP_CBAJ_T0008085.1 MGP_CBAJ_G0006581.1 mouse_genomes_project 5 88833855 88834764 - 1700031L13Rik lincRNA lincRNA MGP_CBAJ_T0008086.1 MGP_CBAJ_G0006581.1 mouse_genomes_project 5 88834104 88834756 - 1700031L13Rik lincRNA lincRNA MGP_CBAJ_T0098416.1 MGP_CBAJ_G0036682.1 mouse_genomes_project 5 128919374 128921789 - sense_intronic sense_intronic MGP_CBAJ_T0071727.1 MGP_CBAJ_G0029294.1 mouse_genomes_project 5 78941630 78994229 + MGP_CBAJ_P0071727 Cwh43 protein_coding protein_coding MGP_CBAJ_T0071728.1 MGP_CBAJ_G0029294.1 mouse_genomes_project 5 78941782 78994239 + MGP_CBAJ_P0071728 Cwh43 protein_coding protein_coding MGP_CBAJ_T0071729.1 MGP_CBAJ_G0029294.1 mouse_genomes_project 5 78941917 78994086 + MGP_CBAJ_P0071729 Cwh43 protein_coding unknown_likely_coding MGP_CBAJ_T0071730.1 MGP_CBAJ_G0029294.1 mouse_genomes_project 5 78969655 78973813 + Cwh43 protein_coding retained_intron MGP_CBAJ_T0004664.1 MGP_CBAJ_G0004028.1 mouse_genomes_project 5 108942685 108944721 + 4930522N08Rik antisense antisense MGP_CBAJ_T0001411.1 MGP_CBAJ_G0001335.1 mouse_genomes_project 5 11267956 11270453 - TEC TEC MGP_CBAJ_T0014951.1 MGP_CBAJ_G0013063.1 mouse_genomes_project 5 153879891 153880126 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0073994.1 MGP_CBAJ_G0029753.1 mouse_genomes_project 5 138097656 138207335 - MGP_CBAJ_P0073994 Pitpnm2 protein_coding protein_coding MGP_CBAJ_T0073995.1 MGP_CBAJ_G0029753.1 mouse_genomes_project 5 138097656 138240682 - MGP_CBAJ_P0073995 Pitpnm2 protein_coding protein_coding MGP_CBAJ_T0073996.1 MGP_CBAJ_G0029753.1 mouse_genomes_project 5 138097657 138240373 - MGP_CBAJ_P0073996 Pitpnm2 protein_coding protein_coding MGP_CBAJ_T0073997.1 MGP_CBAJ_G0029753.1 mouse_genomes_project 5 138098713 138169241 - MGP_CBAJ_P0073997 Pitpnm2 protein_coding protein_coding MGP_CBAJ_T0073998.1 MGP_CBAJ_G0029753.1 mouse_genomes_project 5 138099260 138103510 - Pitpnm2 protein_coding retained_intron MGP_CBAJ_T0073999.1 MGP_CBAJ_G0029753.1 mouse_genomes_project 5 138100040 138101066 - Pitpnm2 protein_coding retained_intron MGP_CBAJ_T0074000.1 MGP_CBAJ_G0029753.1 mouse_genomes_project 5 138104172 138105588 - Pitpnm2 protein_coding retained_intron MGP_CBAJ_T0074001.1 MGP_CBAJ_G0029753.1 mouse_genomes_project 5 138111754 138171805 - MGP_CBAJ_P0074001 Pitpnm2 protein_coding protein_coding MGP_CBAJ_T0074002.1 MGP_CBAJ_G0029753.1 mouse_genomes_project 5 138111927 138119211 - Pitpnm2 protein_coding retained_intron MGP_CBAJ_T0074003.1 MGP_CBAJ_G0029753.1 mouse_genomes_project 5 138122551 138167177 - MGP_CBAJ_P0074003 Pitpnm2 protein_coding protein_coding MGP_CBAJ_T0075344.1 MGP_CBAJ_G0030012.1 mouse_genomes_project 5 161232230 161341616 + MGP_CBAJ_P0075344 Lmtk2 protein_coding protein_coding MGP_CBAJ_T0004552.1 MGP_CBAJ_G0003942.1 mouse_genomes_project 5 13082739 13111377 - Gm26954 antisense antisense MGP_CBAJ_T0004553.1 MGP_CBAJ_G0003942.1 mouse_genomes_project 5 13099749 13111362 - Gm26954 antisense antisense MGP_CBAJ_T0008124.1 MGP_CBAJ_G0006614.1 mouse_genomes_project 5 109819074 109827310 - 5430416N02Rik lincRNA lincRNA MGP_CBAJ_T0008125.1 MGP_CBAJ_G0006614.1 mouse_genomes_project 5 109821882 109827291 - 5430416N02Rik lincRNA lincRNA MGP_CBAJ_T0008126.1 MGP_CBAJ_G0006614.1 mouse_genomes_project 5 109826510 109827150 - 5430416N02Rik lincRNA lincRNA MGP_CBAJ_T0008127.1 MGP_CBAJ_G0006614.1 mouse_genomes_project 5 109826768 109827290 - 5430416N02Rik lincRNA lincRNA MGP_CBAJ_T0075133.1 MGP_CBAJ_G0029966.1 mouse_genomes_project 5 157071704 157101077 + MGP_CBAJ_P0075133 Eif3b protein_coding protein_coding MGP_CBAJ_T0075134.1 MGP_CBAJ_G0029966.1 mouse_genomes_project 5 157079468 157083050 + Eif3b protein_coding retained_intron MGP_CBAJ_T0075135.1 MGP_CBAJ_G0029966.1 mouse_genomes_project 5 157094900 157100414 + MGP_CBAJ_P0075135 Eif3b protein_coding protein_coding MGP_CBAJ_T0074968.1 MGP_CBAJ_G0029933.1 mouse_genomes_project 5 154473427 154479778 - MGP_CBAJ_P0074968 Gpc2 protein_coding protein_coding MGP_CBAJ_T0074969.1 MGP_CBAJ_G0029933.1 mouse_genomes_project 5 154473429 154479758 - Gpc2 protein_coding retained_intron MGP_CBAJ_T0074970.1 MGP_CBAJ_G0029933.1 mouse_genomes_project 5 154473429 154479735 - Gpc2 protein_coding retained_intron MGP_CBAJ_T0074971.1 MGP_CBAJ_G0029933.1 mouse_genomes_project 5 154473429 154479755 - MGP_CBAJ_P0074971 Gpc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074972.1 MGP_CBAJ_G0029933.1 mouse_genomes_project 5 154473432 154479738 - MGP_CBAJ_P0074972 Gpc2 protein_coding protein_coding MGP_CBAJ_T0074973.1 MGP_CBAJ_G0029933.1 mouse_genomes_project 5 154475300 154478010 - Gpc2 protein_coding retained_intron MGP_CBAJ_T0074974.1 MGP_CBAJ_G0029933.1 mouse_genomes_project 5 154476413 154479736 - Gpc2 protein_coding processed_transcript MGP_CBAJ_T0072179.1 MGP_CBAJ_G0029401.1 mouse_genomes_project 5 98954243 98956311 + MGP_CBAJ_P0072179 Cxcl2 protein_coding protein_coding MGP_CBAJ_T0072180.1 MGP_CBAJ_G0029401.1 mouse_genomes_project 5 98954245 98956311 + Cxcl2 protein_coding retained_intron MGP_CBAJ_T0072181.1 MGP_CBAJ_G0029401.1 mouse_genomes_project 5 98954245 98954734 + Cxcl2 protein_coding retained_intron MGP_CBAJ_T0072182.1 MGP_CBAJ_G0029401.1 mouse_genomes_project 5 98954245 98956311 + MGP_CBAJ_P0072182 Cxcl2 protein_coding protein_coding MGP_CBAJ_T0008369.1 MGP_CBAJ_G0006777.1 mouse_genomes_project 5 168265491 168268153 - Gm43450 lincRNA lincRNA MGP_CBAJ_T0008131.1 MGP_CBAJ_G0006618.1 mouse_genomes_project 5 111292254 111294519 + Gm43270 lincRNA lincRNA MGP_CBAJ_T0014640.1 MGP_CBAJ_G0012752.1 mouse_genomes_project 5 7061961 7062203 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0075159.1 MGP_CBAJ_G0029972.1 mouse_genomes_project 5 157403665 157417993 + MGP_CBAJ_P0075159 Brat1 protein_coding protein_coding MGP_CBAJ_T0075160.1 MGP_CBAJ_G0029972.1 mouse_genomes_project 5 157403677 157417944 + MGP_CBAJ_P0075160 Brat1 protein_coding protein_coding MGP_CBAJ_T0075161.1 MGP_CBAJ_G0029972.1 mouse_genomes_project 5 157403677 157417787 + MGP_CBAJ_P0075161 Brat1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075162.1 MGP_CBAJ_G0029972.1 mouse_genomes_project 5 157403704 157414549 + Brat1 protein_coding retained_intron MGP_CBAJ_T0075163.1 MGP_CBAJ_G0029972.1 mouse_genomes_project 5 157403706 157414273 + Brat1 protein_coding retained_intron MGP_CBAJ_T0075164.1 MGP_CBAJ_G0029972.1 mouse_genomes_project 5 157403720 157417993 + MGP_CBAJ_P0075164 Brat1 protein_coding protein_coding MGP_CBAJ_T0001544.1 MGP_CBAJ_G0001464.1 mouse_genomes_project 5 52445612 52446762 - TEC TEC MGP_CBAJ_T0001817.1 MGP_CBAJ_G0001734.1 mouse_genomes_project 5 146666082 146667215 - TEC TEC MGP_CBAJ_T0001408.1 MGP_CBAJ_G0001332.1 mouse_genomes_project 5 10089823 10097227 - TEC TEC MGP_CBAJ_T0008111.1 MGP_CBAJ_G0006605.1 mouse_genomes_project 5 107715954 107729296 - 1700010H22Rik lincRNA lincRNA MGP_CBAJ_T0008112.1 MGP_CBAJ_G0006605.1 mouse_genomes_project 5 107725137 107729374 - 1700010H22Rik lincRNA lincRNA MGP_CBAJ_T0008113.1 MGP_CBAJ_G0006605.1 mouse_genomes_project 5 107726558 107729132 - 1700010H22Rik lincRNA lincRNA MGP_CBAJ_T0008130.1 MGP_CBAJ_G0006617.1 mouse_genomes_project 5 111286958 111292732 - Gm43271 lincRNA lincRNA MGP_CBAJ_T0075525.1 MGP_CBAJ_G0030062.1 mouse_genomes_project 5 165175927 165200706 - MGP_CBAJ_P0075525 Urad protein_coding protein_coding MGP_CBAJ_T0100623.1 MGP_CBAJ_G0038878.1 mouse_genomes_project 5 95265484 95265607 - Gm24314 snoRNA snoRNA MGP_CBAJ_T0073326.1 MGP_CBAJ_G0029637.1 mouse_genomes_project 5 127750639 127809923 + MGP_CBAJ_P0073326 Gcn1l1 protein_coding protein_coding MGP_CBAJ_T0073327.1 MGP_CBAJ_G0029637.1 mouse_genomes_project 5 127750657 127770566 + Gcn1l1 protein_coding retained_intron MGP_CBAJ_T0073328.1 MGP_CBAJ_G0029637.1 mouse_genomes_project 5 127750659 127766653 + Gcn1l1 protein_coding retained_intron MGP_CBAJ_T0073329.1 MGP_CBAJ_G0029637.1 mouse_genomes_project 5 127750661 127771075 + Gcn1l1 protein_coding retained_intron MGP_CBAJ_T0073330.1 MGP_CBAJ_G0029637.1 mouse_genomes_project 5 127750688 127752606 + Gcn1l1 protein_coding retained_intron MGP_CBAJ_T0073331.1 MGP_CBAJ_G0029637.1 mouse_genomes_project 5 127767769 127773746 + Gcn1l1 protein_coding processed_transcript MGP_CBAJ_T0073332.1 MGP_CBAJ_G0029637.1 mouse_genomes_project 5 127791801 127809917 + Gcn1l1 protein_coding processed_transcript MGP_CBAJ_T0073333.1 MGP_CBAJ_G0029637.1 mouse_genomes_project 5 127795943 127796720 + Gcn1l1 protein_coding retained_intron MGP_CBAJ_T0073334.1 MGP_CBAJ_G0029637.1 mouse_genomes_project 5 127798921 127800480 + Gcn1l1 protein_coding processed_transcript MGP_CBAJ_T0073335.1 MGP_CBAJ_G0029637.1 mouse_genomes_project 5 127801962 127803110 + Gcn1l1 protein_coding retained_intron MGP_CBAJ_T0010572.1 MGP_CBAJ_G0008710.1 mouse_genomes_project 5 101131183 101131295 - Mir1961 miRNA miRNA MGP_CBAJ_T0014671.1 MGP_CBAJ_G0012783.1 mouse_genomes_project 5 21130851 21131136 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014794.1 MGP_CBAJ_G0012906.1 mouse_genomes_project 5 71629416 71629927 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004805.1 MGP_CBAJ_G0004126.1 mouse_genomes_project 5 165072298 165122998 - 2210019I11Rik antisense antisense MGP_CBAJ_T0004806.1 MGP_CBAJ_G0004126.1 mouse_genomes_project 5 165074465 165122979 - 2210019I11Rik antisense antisense MGP_CBAJ_T0004807.1 MGP_CBAJ_G0004126.1 mouse_genomes_project 5 165082249 165122472 - 2210019I11Rik antisense antisense MGP_CBAJ_T0008329.1 MGP_CBAJ_G0006748.1 mouse_genomes_project 5 160923326 160930783 + D130017N08Rik lincRNA lincRNA MGP_CBAJ_T0008330.1 MGP_CBAJ_G0006748.1 mouse_genomes_project 5 160924834 160932103 + D130017N08Rik lincRNA lincRNA MGP_CBAJ_T0008332.1 MGP_CBAJ_G0006748.1 mouse_genomes_project 5 160931283 160933548 + D130017N08Rik lincRNA lincRNA MGP_CBAJ_T0014734.1 MGP_CBAJ_G0012846.1 mouse_genomes_project 5 42984573 42987005 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001707.1 MGP_CBAJ_G0001625.1 mouse_genomes_project 5 116028974 116031236 + TEC TEC MGP_CBAJ_T0071074.1 MGP_CBAJ_G0029182.1 mouse_genomes_project 5 40009828 40188506 - MGP_CBAJ_P0071074 Clnk protein_coding protein_coding MGP_CBAJ_T0071075.1 MGP_CBAJ_G0029182.1 mouse_genomes_project 5 40009828 40188506 - MGP_CBAJ_P0071075 Clnk protein_coding protein_coding MGP_CBAJ_T0001791.1 MGP_CBAJ_G0001708.1 mouse_genomes_project 5 139594796 139597660 + TEC TEC MGP_CBAJ_T0004740.1 MGP_CBAJ_G0004082.1 mouse_genomes_project 5 136725346 136733123 - Gm2479 antisense antisense MGP_CBAJ_T0004741.1 MGP_CBAJ_G0004082.1 mouse_genomes_project 5 136725511 136730921 - Gm2479 antisense antisense MGP_CBAJ_T0014910.1 MGP_CBAJ_G0013022.1 mouse_genomes_project 5 126100691 126101438 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001678.1 MGP_CBAJ_G0001596.1 mouse_genomes_project 5 101467099 101469237 + TEC TEC MGP_CBAJ_T0071181.1 MGP_CBAJ_G0029204.1 mouse_genomes_project 5 47596680 47603300 - Fam184b protein_coding retained_intron MGP_CBAJ_T0071182.1 MGP_CBAJ_G0029204.1 mouse_genomes_project 5 47596680 47708895 - MGP_CBAJ_P0071182 Fam184b protein_coding protein_coding MGP_CBAJ_T0014889.1 MGP_CBAJ_G0013001.1 mouse_genomes_project 5 118598610 118600292 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014973.1 MGP_CBAJ_G0013085.1 mouse_genomes_project 5 162360805 162361254 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0070916.1 MGP_CBAJ_G0029155.1 mouse_genomes_project 5 37585514 37594520 + MGP_CBAJ_P0070916 Grpel1 protein_coding protein_coding MGP_CBAJ_T0001662.1 MGP_CBAJ_G0001580.1 mouse_genomes_project 5 80901635 80902085 - TEC TEC MGP_CBAJ_T0070103.1 MGP_CBAJ_G0029021.1 mouse_genomes_project 5 24550740 24824233 - MGP_CBAJ_P0070103 Prkag2 protein_coding protein_coding MGP_CBAJ_T0070104.1 MGP_CBAJ_G0029021.1 mouse_genomes_project 5 24550744 24601329 - MGP_CBAJ_P0070104 Prkag2 protein_coding protein_coding MGP_CBAJ_T0070105.1 MGP_CBAJ_G0029021.1 mouse_genomes_project 5 24550744 24704301 - MGP_CBAJ_P0070105 Prkag2 protein_coding protein_coding MGP_CBAJ_T0070106.1 MGP_CBAJ_G0029021.1 mouse_genomes_project 5 24551769 24563159 - Prkag2 protein_coding retained_intron MGP_CBAJ_T0070107.1 MGP_CBAJ_G0029021.1 mouse_genomes_project 5 24560669 24601369 - MGP_CBAJ_P0070107 Prkag2 protein_coding protein_coding MGP_CBAJ_T0070108.1 MGP_CBAJ_G0029021.1 mouse_genomes_project 5 24562942 24593365 - MGP_CBAJ_P0070108 Prkag2 protein_coding protein_coding MGP_CBAJ_T0070109.1 MGP_CBAJ_G0029021.1 mouse_genomes_project 5 24566326 24580577 - Prkag2 protein_coding retained_intron MGP_CBAJ_T0070110.1 MGP_CBAJ_G0029021.1 mouse_genomes_project 5 24566852 24601312 - Prkag2 protein_coding retained_intron MGP_CBAJ_T0070111.1 MGP_CBAJ_G0029021.1 mouse_genomes_project 5 24580585 24601835 - MGP_CBAJ_P0070111 Prkag2 protein_coding protein_coding MGP_CBAJ_T0070112.1 MGP_CBAJ_G0029021.1 mouse_genomes_project 5 24599090 24601310 - Prkag2 protein_coding processed_transcript MGP_CBAJ_T0099387.1 MGP_CBAJ_G0037642.1 mouse_genomes_project 5 124712190 124712299 + Gm22740 snRNA snRNA MGP_CBAJ_T0075138.1 MGP_CBAJ_G0029968.1 mouse_genomes_project 5 157252283 157254236 - MGP_CBAJ_P0075138 Grifin protein_coding protein_coding MGP_CBAJ_T0072665.1 MGP_CBAJ_G0029506.1 mouse_genomes_project 5 117874329 117920606 + MGP_CBAJ_P0072665 protein_coding protein_coding MGP_CBAJ_T0075456.1 MGP_CBAJ_G0030037.1 mouse_genomes_project 5 163233155 163317941 - MGP_CBAJ_P0075456 protein_coding protein_coding MGP_CBAJ_T0014700.1 MGP_CBAJ_G0012812.1 mouse_genomes_project 5 27780487 27780968 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004631.1 MGP_CBAJ_G0004005.1 mouse_genomes_project 5 77619338 77677491 + Gm20647 antisense antisense MGP_CBAJ_T0072079.1 MGP_CBAJ_G0029371.1 mouse_genomes_project 5 95951982 95968430 + MGP_CBAJ_P0072079 Gm7714 protein_coding protein_coding MGP_CBAJ_T0014929.1 MGP_CBAJ_G0013041.1 mouse_genomes_project 5 136801121 136801579 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0072567.1 MGP_CBAJ_G0029486.1 mouse_genomes_project 5 114861714 114952834 - protein_coding processed_transcript MGP_CBAJ_T0014630.1 MGP_CBAJ_G0012742.1 mouse_genomes_project 5 2838367 2838797 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001485.1 MGP_CBAJ_G0001406.1 mouse_genomes_project 5 45058329 45059541 + TEC TEC MGP_CBAJ_T0099363.1 MGP_CBAJ_G0037618.1 mouse_genomes_project 5 86174209 86174358 - Gm23429 snRNA snRNA MGP_CBAJ_T0070323.1 MGP_CBAJ_G0029065.1 mouse_genomes_project 5 31216255 31218159 - MGP_CBAJ_P0070323 Ost4 protein_coding protein_coding MGP_CBAJ_T0070324.1 MGP_CBAJ_G0029065.1 mouse_genomes_project 5 31216888 31218096 - MGP_CBAJ_P0070324 Ost4 protein_coding protein_coding MGP_CBAJ_T0001399.1 MGP_CBAJ_G0001323.1 mouse_genomes_project 5 4757765 4761769 - TEC TEC MGP_CBAJ_T0001463.1 MGP_CBAJ_G0001384.1 mouse_genomes_project 5 33330925 33331776 - TEC TEC MGP_CBAJ_T0100640.1 MGP_CBAJ_G0038895.1 mouse_genomes_project 5 144458758 144458889 + Snora15 snoRNA snoRNA MGP_CBAJ_T0073273.1 MGP_CBAJ_G0029626.1 mouse_genomes_project 5 127397746 127419873 + MGP_CBAJ_P0073273 Coq5 protein_coding protein_coding MGP_CBAJ_T0073274.1 MGP_CBAJ_G0029626.1 mouse_genomes_project 5 127397775 127398849 + Coq5 protein_coding retained_intron MGP_CBAJ_T0073275.1 MGP_CBAJ_G0029626.1 mouse_genomes_project 5 127397798 127419877 + MGP_CBAJ_P0073275 Coq5 protein_coding unknown_likely_coding MGP_CBAJ_T0073276.1 MGP_CBAJ_G0029626.1 mouse_genomes_project 5 127403873 127419209 + MGP_CBAJ_P0073276 Coq5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0001465.1 MGP_CBAJ_G0001386.1 mouse_genomes_project 5 33687375 33688624 + TEC TEC MGP_CBAJ_T0001471.1 MGP_CBAJ_G0001392.1 mouse_genomes_project 5 36401380 36402620 - TEC TEC MGP_CBAJ_T0001561.1 MGP_CBAJ_G0001481.1 mouse_genomes_project 5 56928318 56930089 + TEC TEC MGP_CBAJ_T0001505.1 MGP_CBAJ_G0001426.1 mouse_genomes_project 5 46709314 46711831 - TEC TEC MGP_CBAJ_T0014627.1 MGP_CBAJ_G0012739.1 mouse_genomes_project 5 361937 362108 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008358.1 MGP_CBAJ_G0006772.1 mouse_genomes_project 5 167488946 167495580 + 2310047D07Rik lincRNA lincRNA MGP_CBAJ_T0008360.1 MGP_CBAJ_G0006772.1 mouse_genomes_project 5 167494749 167495562 + 2310047D07Rik lincRNA lincRNA MGP_CBAJ_T0001713.1 MGP_CBAJ_G0001631.1 mouse_genomes_project 5 118273873 118275038 + TEC TEC MGP_CBAJ_T0001537.1 MGP_CBAJ_G0001457.1 mouse_genomes_project 5 51486669 51489566 - TEC TEC MGP_CBAJ_T0098434.1 MGP_CBAJ_G0036696.1 mouse_genomes_project 5 169274128 169275909 + Gm43807 sense_intronic sense_intronic MGP_CBAJ_T0001402.1 MGP_CBAJ_G0001326.1 mouse_genomes_project 5 6123976 6126410 - TEC TEC MGP_CBAJ_T0008041.1 MGP_CBAJ_G0006548.1 mouse_genomes_project 5 68737204 68743479 + lincRNA lincRNA MGP_CBAJ_T0073539.1 MGP_CBAJ_G0029678.1 mouse_genomes_project 5 133888477 133897768 - MGP_CBAJ_P0073539 protein_coding protein_coding MGP_CBAJ_T0073050.1 MGP_CBAJ_G0029583.1 mouse_genomes_project 5 125445540 125480633 - MGP_CBAJ_P0073050 1700069L16Rik protein_coding protein_coding MGP_CBAJ_T0073051.1 MGP_CBAJ_G0029583.1 mouse_genomes_project 5 125453552 125457638 - 1700069L16Rik protein_coding processed_transcript MGP_CBAJ_T0073052.1 MGP_CBAJ_G0029583.1 mouse_genomes_project 5 125456892 125480610 - MGP_CBAJ_P0073052 1700069L16Rik protein_coding protein_coding MGP_CBAJ_T0008114.1 MGP_CBAJ_G0006606.1 mouse_genomes_project 5 108231484 108381586 - Gm43251 lincRNA lincRNA MGP_CBAJ_T0074897.1 MGP_CBAJ_G0029915.1 mouse_genomes_project 5 153976260 153985365 + MGP_CBAJ_P0074897 Azgp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074898.1 MGP_CBAJ_G0029915.1 mouse_genomes_project 5 153976279 153985365 + MGP_CBAJ_P0074898 Azgp1 protein_coding protein_coding MGP_CBAJ_T0074899.1 MGP_CBAJ_G0029915.1 mouse_genomes_project 5 153976308 153980741 + Azgp1 protein_coding retained_intron MGP_CBAJ_T0001539.1 MGP_CBAJ_G0001459.1 mouse_genomes_project 5 51530361 51534516 - TEC TEC MGP_CBAJ_T0014856.1 MGP_CBAJ_G0012968.1 mouse_genomes_project 5 101786103 101788564 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0074346.1 MGP_CBAJ_G0029817.1 mouse_genomes_project 5 149377084 149417379 + MGP_CBAJ_P0074346 Gtf2ird2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074347.1 MGP_CBAJ_G0029817.1 mouse_genomes_project 5 149377268 149411211 + MGP_CBAJ_P0074347 Gtf2ird2 protein_coding protein_coding MGP_CBAJ_T0074348.1 MGP_CBAJ_G0029817.1 mouse_genomes_project 5 149391104 149391732 + Gtf2ird2 protein_coding processed_transcript MGP_CBAJ_T0074349.1 MGP_CBAJ_G0029817.1 mouse_genomes_project 5 149399715 149409273 + Gtf2ird2 protein_coding retained_intron MGP_CBAJ_T0074350.1 MGP_CBAJ_G0029817.1 mouse_genomes_project 5 149407167 149409671 + MGP_CBAJ_P0074350 Gtf2ird2 protein_coding protein_coding MGP_CBAJ_T0001410.1 MGP_CBAJ_G0001334.1 mouse_genomes_project 5 10598584 10602205 + TEC TEC MGP_CBAJ_T0072892.1 MGP_CBAJ_G0029552.1 mouse_genomes_project 5 121884550 121967343 + MGP_CBAJ_P0072892 Galnt9 protein_coding protein_coding MGP_CBAJ_T0072893.1 MGP_CBAJ_G0029552.1 mouse_genomes_project 5 121947288 121967345 + MGP_CBAJ_P0072893 Galnt9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072894.1 MGP_CBAJ_G0029552.1 mouse_genomes_project 5 121947289 121967348 + MGP_CBAJ_P0072894 Galnt9 protein_coding protein_coding MGP_CBAJ_T0008347.1 MGP_CBAJ_G0006764.1 mouse_genomes_project 5 167125672 167127073 + 8430423G03Rik lincRNA lincRNA MGP_CBAJ_T0099332.1 MGP_CBAJ_G0037587.1 mouse_genomes_project 5 19101853 19101957 + Gm23570 snRNA snRNA MGP_CBAJ_T0071436.1 MGP_CBAJ_G0029248.1 mouse_genomes_project 5 69944703 70015665 - MGP_CBAJ_P0071436 Gm43552 protein_coding protein_coding MGP_CBAJ_T0070387.1 MGP_CBAJ_G0029077.1 mouse_genomes_project 5 31492458 31493225 - MGP_CBAJ_P0070387 Ucn protein_coding protein_coding MGP_CBAJ_T0070388.1 MGP_CBAJ_G0029077.1 mouse_genomes_project 5 31492458 31493225 - MGP_CBAJ_P0070388 Ucn protein_coding protein_coding MGP_CBAJ_T0071171.1 MGP_CBAJ_G0029202.1 mouse_genomes_project 5 47555717 47579687 + MGP_CBAJ_P0071171 Lap3 protein_coding protein_coding MGP_CBAJ_T0071172.1 MGP_CBAJ_G0029202.1 mouse_genomes_project 5 47555847 47565140 + Lap3 protein_coding retained_intron MGP_CBAJ_T0071173.1 MGP_CBAJ_G0029202.1 mouse_genomes_project 5 47555869 47567778 + MGP_CBAJ_P0071173 Lap3 protein_coding protein_coding MGP_CBAJ_T0071174.1 MGP_CBAJ_G0029202.1 mouse_genomes_project 5 47560574 47569227 + Lap3 protein_coding retained_intron MGP_CBAJ_T0071175.1 MGP_CBAJ_G0029202.1 mouse_genomes_project 5 47564733 47569198 + Lap3 protein_coding retained_intron MGP_CBAJ_T0071176.1 MGP_CBAJ_G0029202.1 mouse_genomes_project 5 47576204 47578369 + Lap3 protein_coding retained_intron MGP_CBAJ_T0001404.1 MGP_CBAJ_G0001328.1 mouse_genomes_project 5 6492000 6492301 + TEC TEC MGP_CBAJ_T0014714.1 MGP_CBAJ_G0012826.1 mouse_genomes_project 5 33138163 33138558 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0073070.1 MGP_CBAJ_G0029588.1 mouse_genomes_project 5 125583385 125584416 - MGP_CBAJ_P0073070 Selplg protein_coding protein_coding MGP_CBAJ_T0073071.1 MGP_CBAJ_G0029588.1 mouse_genomes_project 5 125583396 125595125 - MGP_CBAJ_P0073071 Selplg protein_coding protein_coding MGP_CBAJ_T0073072.1 MGP_CBAJ_G0029588.1 mouse_genomes_project 5 125583404 125584167 - MGP_CBAJ_P0073072 Selplg protein_coding protein_coding MGP_CBAJ_T0073073.1 MGP_CBAJ_G0029588.1 mouse_genomes_project 5 125583404 125584107 - MGP_CBAJ_P0073073 Selplg protein_coding protein_coding MGP_CBAJ_T0073074.1 MGP_CBAJ_G0029588.1 mouse_genomes_project 5 125584895 125597270 - MGP_CBAJ_P0073074 Selplg protein_coding protein_coding MGP_CBAJ_T0073075.1 MGP_CBAJ_G0029588.1 mouse_genomes_project 5 125592784 125595096 - Selplg protein_coding retained_intron MGP_CBAJ_T0101966.1 MGP_CBAJ_G0039997.1 mouse_genomes_project 5 170247710 170247798 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0071248.1 MGP_CBAJ_G0029211.1 mouse_genomes_project 5 54118437 54229952 - MGP_CBAJ_P0071248 Ppargc1a protein_coding protein_coding MGP_CBAJ_T0071249.1 MGP_CBAJ_G0029211.1 mouse_genomes_project 5 54121840 54230041 - MGP_CBAJ_P0071249 Ppargc1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0071250.1 MGP_CBAJ_G0029211.1 mouse_genomes_project 5 54122367 54244489 - MGP_CBAJ_P0071250 Ppargc1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0071251.1 MGP_CBAJ_G0029211.1 mouse_genomes_project 5 54160938 54244511 - MGP_CBAJ_P0071251 Ppargc1a protein_coding protein_coding MGP_CBAJ_T0008226.1 MGP_CBAJ_G0006678.1 mouse_genomes_project 5 129882490 129886849 + Gm15728 lincRNA lincRNA MGP_CBAJ_T0008227.1 MGP_CBAJ_G0006678.1 mouse_genomes_project 5 129882566 129883935 + Gm15728 lincRNA lincRNA MGP_CBAJ_T0069885.1 MGP_CBAJ_G0028978.1 mouse_genomes_project 5 20440054 20582108 - MGP_CBAJ_P0069885 Ccdc146 protein_coding protein_coding MGP_CBAJ_T0069886.1 MGP_CBAJ_G0028978.1 mouse_genomes_project 5 20467377 20582108 - MGP_CBAJ_P0069886 Ccdc146 protein_coding protein_coding MGP_CBAJ_T0069887.1 MGP_CBAJ_G0028978.1 mouse_genomes_project 5 20467660 20484388 - Ccdc146 protein_coding retained_intron MGP_CBAJ_T0069888.1 MGP_CBAJ_G0028978.1 mouse_genomes_project 5 20468499 20476236 - Ccdc146 protein_coding retained_intron MGP_CBAJ_T0069889.1 MGP_CBAJ_G0028978.1 mouse_genomes_project 5 20476289 20484602 - Ccdc146 protein_coding processed_transcript MGP_CBAJ_T0100604.1 MGP_CBAJ_G0038859.1 mouse_genomes_project 5 55769335 55769447 - Gm23532 snoRNA snoRNA MGP_CBAJ_T0070642.1 MGP_CBAJ_G0029115.1 mouse_genomes_project 5 34413908 34416076 + MGP_CBAJ_P0070642 Gm9903 protein_coding protein_coding MGP_CBAJ_T0070611.1 MGP_CBAJ_G0029110.1 mouse_genomes_project 5 33990544 34017980 - MGP_CBAJ_P0070611 Ctbp1 protein_coding protein_coding MGP_CBAJ_T0070612.1 MGP_CBAJ_G0029110.1 mouse_genomes_project 5 33990575 34017978 - MGP_CBAJ_P0070612 Ctbp1 protein_coding protein_coding MGP_CBAJ_T0070613.1 MGP_CBAJ_G0029110.1 mouse_genomes_project 5 33990846 34017967 - MGP_CBAJ_P0070613 Ctbp1 protein_coding protein_coding MGP_CBAJ_T0070614.1 MGP_CBAJ_G0029110.1 mouse_genomes_project 5 33990989 33992072 - Ctbp1 protein_coding retained_intron MGP_CBAJ_T0070615.1 MGP_CBAJ_G0029110.1 mouse_genomes_project 5 33991082 33992375 - Ctbp1 protein_coding retained_intron MGP_CBAJ_T0070616.1 MGP_CBAJ_G0029110.1 mouse_genomes_project 5 33991321 34017926 - MGP_CBAJ_P0070616 Ctbp1 protein_coding protein_coding MGP_CBAJ_T0070617.1 MGP_CBAJ_G0029110.1 mouse_genomes_project 5 33993204 34012474 - MGP_CBAJ_P0070617 Ctbp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070618.1 MGP_CBAJ_G0029110.1 mouse_genomes_project 5 33993679 34017965 - MGP_CBAJ_P0070618 Ctbp1 protein_coding protein_coding MGP_CBAJ_T0070619.1 MGP_CBAJ_G0029110.1 mouse_genomes_project 5 34002122 34012622 - MGP_CBAJ_P0070619 Ctbp1 protein_coding protein_coding MGP_CBAJ_T0070620.1 MGP_CBAJ_G0029110.1 mouse_genomes_project 5 34003464 34012510 - Ctbp1 protein_coding retained_intron MGP_CBAJ_T0070621.1 MGP_CBAJ_G0029110.1 mouse_genomes_project 5 34003881 34017565 - MGP_CBAJ_P0070621 Ctbp1 protein_coding protein_coding MGP_CBAJ_T0070622.1 MGP_CBAJ_G0029110.1 mouse_genomes_project 5 34009885 34017576 - MGP_CBAJ_P0070622 Ctbp1 protein_coding protein_coding MGP_CBAJ_T0073381.1 MGP_CBAJ_G0029644.1 mouse_genomes_project 5 128727137 128751834 - MGP_CBAJ_P0073381 Hspb8 protein_coding protein_coding MGP_CBAJ_T0073382.1 MGP_CBAJ_G0029644.1 mouse_genomes_project 5 128727586 128741580 - Hspb8 protein_coding processed_transcript MGP_CBAJ_T0008247.1 MGP_CBAJ_G0006695.1 mouse_genomes_project 5 136777602 137023913 - lincRNA lincRNA MGP_CBAJ_T0070023.1 MGP_CBAJ_G0029006.1 mouse_genomes_project 5 24024225 24029515 - MGP_CBAJ_P0070023 Cdk5 protein_coding protein_coding MGP_CBAJ_T0070024.1 MGP_CBAJ_G0029006.1 mouse_genomes_project 5 24025360 24029470 - MGP_CBAJ_P0070024 Cdk5 protein_coding protein_coding MGP_CBAJ_T0070025.1 MGP_CBAJ_G0029006.1 mouse_genomes_project 5 24026983 24028680 - Cdk5 protein_coding retained_intron MGP_CBAJ_T0075331.1 MGP_CBAJ_G0030009.1 mouse_genomes_project 5 161057621 161070984 + Rsph10b protein_coding processed_transcript MGP_CBAJ_T0075332.1 MGP_CBAJ_G0030009.1 mouse_genomes_project 5 161057648 161113164 + MGP_CBAJ_P0075332 Rsph10b protein_coding protein_coding MGP_CBAJ_T0075333.1 MGP_CBAJ_G0030009.1 mouse_genomes_project 5 161061669 161113168 + MGP_CBAJ_P0075333 Rsph10b protein_coding unknown_likely_coding MGP_CBAJ_T0075334.1 MGP_CBAJ_G0030009.1 mouse_genomes_project 5 161061669 161070981 + MGP_CBAJ_P0075334 Rsph10b protein_coding protein_coding MGP_CBAJ_T0075335.1 MGP_CBAJ_G0030009.1 mouse_genomes_project 5 161108651 161112973 + Rsph10b protein_coding processed_transcript MGP_CBAJ_T0075522.1 MGP_CBAJ_G0030059.1 mouse_genomes_project 5 165030433 165033485 + MGP_CBAJ_P0075522 Gsx1 protein_coding protein_coding MGP_CBAJ_T0074850.1 MGP_CBAJ_G0029903.1 mouse_genomes_project 5 153555115 153557623 - MGP_CBAJ_P0074850 Irs3 protein_coding protein_coding MGP_CBAJ_T0074851.1 MGP_CBAJ_G0029903.1 mouse_genomes_project 5 153555116 153557800 - MGP_CBAJ_P0074851 Irs3 protein_coding protein_coding MGP_CBAJ_T0101959.1 MGP_CBAJ_G0039990.1 mouse_genomes_project 5 163332284 163351309 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0098066.1 MGP_CBAJ_G0036339.1 mouse_genomes_project 5 149651475 149651589 + n-R5s178 rRNA rRNA MGP_CBAJ_T0001679.1 MGP_CBAJ_G0001597.1 mouse_genomes_project 5 101468865 101469458 - TEC TEC MGP_CBAJ_T0001614.1 MGP_CBAJ_G0001533.1 mouse_genomes_project 5 71025301 71026634 - TEC TEC MGP_CBAJ_T0010566.1 MGP_CBAJ_G0008704.1 mouse_genomes_project 5 83298814 83298896 + Mir5098 miRNA miRNA MGP_CBAJ_T0073701.1 MGP_CBAJ_G0029708.1 mouse_genomes_project 5 135825750 135856178 - MGP_CBAJ_P0073701 Tctn1 protein_coding protein_coding MGP_CBAJ_T0073702.1 MGP_CBAJ_G0029708.1 mouse_genomes_project 5 135831187 135856087 - MGP_CBAJ_P0073702 Tctn1 protein_coding unknown_likely_coding MGP_CBAJ_T0073703.1 MGP_CBAJ_G0029708.1 mouse_genomes_project 5 135832986 135856178 - MGP_CBAJ_P0073703 Tctn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073704.1 MGP_CBAJ_G0029708.1 mouse_genomes_project 5 135837270 135843395 - Tctn1 protein_coding processed_transcript MGP_CBAJ_T0073705.1 MGP_CBAJ_G0029708.1 mouse_genomes_project 5 135840139 135846284 - Tctn1 protein_coding retained_intron MGP_CBAJ_T0073706.1 MGP_CBAJ_G0029708.1 mouse_genomes_project 5 135844040 135856133 - Tctn1 protein_coding retained_intron MGP_CBAJ_T0008345.1 MGP_CBAJ_G0006762.1 mouse_genomes_project 5 166971758 166989048 + Gm15407 lincRNA lincRNA MGP_CBAJ_T0072787.1 MGP_CBAJ_G0029528.1 mouse_genomes_project 5 119205506 119231772 + MGP_CBAJ_P0072787 Idua protein_coding protein_coding MGP_CBAJ_T0072788.1 MGP_CBAJ_G0029528.1 mouse_genomes_project 5 119216832 119231777 + MGP_CBAJ_P0072788 Idua protein_coding protein_coding MGP_CBAJ_T0072789.1 MGP_CBAJ_G0029528.1 mouse_genomes_project 5 119216832 119231772 + MGP_CBAJ_P0072789 Idua protein_coding nonsense_mediated_decay MGP_CBAJ_T0072790.1 MGP_CBAJ_G0029528.1 mouse_genomes_project 5 119217021 119229442 + Idua protein_coding retained_intron MGP_CBAJ_T0072791.1 MGP_CBAJ_G0029528.1 mouse_genomes_project 5 119217037 119231772 + MGP_CBAJ_P0072791 Idua protein_coding protein_coding MGP_CBAJ_T0072792.1 MGP_CBAJ_G0029528.1 mouse_genomes_project 5 119217073 119231619 + MGP_CBAJ_P0072792 Idua protein_coding nonsense_mediated_decay MGP_CBAJ_T0072793.1 MGP_CBAJ_G0029528.1 mouse_genomes_project 5 119217185 119227939 + Idua protein_coding processed_transcript MGP_CBAJ_T0008287.1 MGP_CBAJ_G0006717.1 mouse_genomes_project 5 141944491 141947830 + lincRNA lincRNA MGP_CBAJ_T0014936.1 MGP_CBAJ_G0013048.1 mouse_genomes_project 5 148608749 148609715 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0070066.1 MGP_CBAJ_G0029012.1 mouse_genomes_project 5 24148165 24155960 - MGP_CBAJ_P0070066 Asb10 protein_coding protein_coding MGP_CBAJ_T0070067.1 MGP_CBAJ_G0029012.1 mouse_genomes_project 5 24149104 24156481 - MGP_CBAJ_P0070067 Asb10 protein_coding protein_coding MGP_CBAJ_T0070068.1 MGP_CBAJ_G0029012.1 mouse_genomes_project 5 24149122 24156095 - MGP_CBAJ_P0070068 Asb10 protein_coding protein_coding MGP_CBAJ_T0004634.1 MGP_CBAJ_G0004008.1 mouse_genomes_project 5 80404589 80436600 + Gm15984 antisense antisense MGP_CBAJ_T0004635.1 MGP_CBAJ_G0004008.1 mouse_genomes_project 5 80405011 80415092 + Gm15984 antisense antisense MGP_CBAJ_T0070099.1 MGP_CBAJ_G0029020.1 mouse_genomes_project 5 24485556 24527816 - MGP_CBAJ_P0070099 Rheb protein_coding protein_coding MGP_CBAJ_T0070100.1 MGP_CBAJ_G0029020.1 mouse_genomes_project 5 24486400 24496687 - Rheb protein_coding retained_intron MGP_CBAJ_T0070101.1 MGP_CBAJ_G0029020.1 mouse_genomes_project 5 24492862 24527620 - Rheb protein_coding retained_intron MGP_CBAJ_T0070102.1 MGP_CBAJ_G0029020.1 mouse_genomes_project 5 24525195 24527801 - Rheb protein_coding retained_intron MGP_CBAJ_T0001595.1 MGP_CBAJ_G0001514.1 mouse_genomes_project 5 69995147 69998559 - TEC TEC MGP_CBAJ_T0004588.1 MGP_CBAJ_G0003972.1 mouse_genomes_project 5 38036225 38039510 - Ppp2r2cos antisense antisense MGP_CBAJ_T0008136.1 MGP_CBAJ_G0006622.1 mouse_genomes_project 5 113097154 113099547 - 5430427N15Rik lincRNA lincRNA MGP_CBAJ_T0075465.1 MGP_CBAJ_G0030041.1 mouse_genomes_project 5 163785374 163787649 - MGP_CBAJ_P0075465 Gm3402 protein_coding protein_coding MGP_CBAJ_T0075454.1 MGP_CBAJ_G0030035.1 mouse_genomes_project 5 163232877 163318534 - MGP_CBAJ_P0075454 protein_coding protein_coding MGP_CBAJ_T0014915.1 MGP_CBAJ_G0013027.1 mouse_genomes_project 5 127296451 127296814 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0073544.1 MGP_CBAJ_G0029681.1 mouse_genomes_project 5 134003059 134056062 + MGP_CBAJ_P0073544 Oas1h protein_coding protein_coding MGP_CBAJ_T0073545.1 MGP_CBAJ_G0029681.1 mouse_genomes_project 5 134003076 134055697 + MGP_CBAJ_P0073545 Oas1h protein_coding protein_coding MGP_CBAJ_T0001477.1 MGP_CBAJ_G0001398.1 mouse_genomes_project 5 38356478 38362614 + TEC TEC MGP_CBAJ_T0100597.1 MGP_CBAJ_G0038852.1 mouse_genomes_project 5 5815397 5815541 + Gm23993 snoRNA snoRNA MGP_CBAJ_T0072399.1 MGP_CBAJ_G0029450.1 mouse_genomes_project 5 109305328 109305931 + MGP_CBAJ_P0072399 4930524J08Rik protein_coding protein_coding MGP_CBAJ_T0072314.1 MGP_CBAJ_G0029429.1 mouse_genomes_project 5 101588340 101605001 + MGP_CBAJ_P0072314 2010109A12Rik protein_coding protein_coding MGP_CBAJ_T0072315.1 MGP_CBAJ_G0029429.1 mouse_genomes_project 5 101588355 101589272 + 2010109A12Rik protein_coding retained_intron MGP_CBAJ_T0075295.1 MGP_CBAJ_G0030001.1 mouse_genomes_project 5 160691233 160694422 + MGP_CBAJ_P0075295 protein_coding protein_coding MGP_CBAJ_T0075296.1 MGP_CBAJ_G0030001.1 mouse_genomes_project 5 160691249 160693363 + protein_coding retained_intron MGP_CBAJ_T0075297.1 MGP_CBAJ_G0030001.1 mouse_genomes_project 5 160691527 160694417 + protein_coding processed_transcript MGP_CBAJ_T0101328.1 MGP_CBAJ_G0039424.1 mouse_genomes_project 5 80006820 80011302 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0010603.1 MGP_CBAJ_G0008741.1 mouse_genomes_project 5 153128190 153128287 + Mir8116 miRNA miRNA MGP_CBAJ_T0101937.1 MGP_CBAJ_G0039968.1 mouse_genomes_project 5 94476319 94477382 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0008275.1 MGP_CBAJ_G0006709.1 mouse_genomes_project 5 140961222 141003975 + Gm43757 lincRNA lincRNA MGP_CBAJ_T0008276.1 MGP_CBAJ_G0006709.1 mouse_genomes_project 5 140961244 140966092 + Gm43757 lincRNA lincRNA MGP_CBAJ_T0010552.1 MGP_CBAJ_G0008690.1 mouse_genomes_project 5 37405503 37405562 + Mir7689 miRNA miRNA MGP_CBAJ_T0075234.1 MGP_CBAJ_G0029988.1 mouse_genomes_project 5 160014391 160154772 - MGP_CBAJ_P0075234 Rnf216 protein_coding protein_coding MGP_CBAJ_T0075235.1 MGP_CBAJ_G0029988.1 mouse_genomes_project 5 160015318 160154758 - MGP_CBAJ_P0075235 Rnf216 protein_coding protein_coding MGP_CBAJ_T0075236.1 MGP_CBAJ_G0029988.1 mouse_genomes_project 5 160016115 160137501 - MGP_CBAJ_P0075236 Rnf216 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075237.1 MGP_CBAJ_G0029988.1 mouse_genomes_project 5 160016147 160137501 - MGP_CBAJ_P0075237 Rnf216 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075238.1 MGP_CBAJ_G0029988.1 mouse_genomes_project 5 160040184 160041586 - Rnf216 protein_coding retained_intron MGP_CBAJ_T0075239.1 MGP_CBAJ_G0029988.1 mouse_genomes_project 5 160102192 160154758 - Rnf216 protein_coding retained_intron MGP_CBAJ_T0075240.1 MGP_CBAJ_G0029988.1 mouse_genomes_project 5 160120011 160126831 - Rnf216 protein_coding retained_intron MGP_CBAJ_T0075241.1 MGP_CBAJ_G0029988.1 mouse_genomes_project 5 160129276 160154758 - Rnf216 protein_coding processed_transcript MGP_CBAJ_T0075242.1 MGP_CBAJ_G0029988.1 mouse_genomes_project 5 160129465 160154760 - Rnf216 protein_coding processed_transcript MGP_CBAJ_T0072810.1 MGP_CBAJ_G0029535.1 mouse_genomes_project 5 119810865 119830371 - MGP_CBAJ_P0072810 protein_coding protein_coding MGP_CBAJ_T0001829.1 MGP_CBAJ_G0001746.1 mouse_genomes_project 5 147429909 147432771 - TEC TEC MGP_CBAJ_T0074419.1 MGP_CBAJ_G0029822.1 mouse_genomes_project 5 149822073 149824099 - MGP_CBAJ_P0074419 Syna protein_coding protein_coding MGP_CBAJ_T0014768.1 MGP_CBAJ_G0012880.1 mouse_genomes_project 5 62672382 62673076 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001696.1 MGP_CBAJ_G0001614.1 mouse_genomes_project 5 111411867 111413455 + TEC TEC MGP_CBAJ_T0072236.1 MGP_CBAJ_G0029416.1 mouse_genomes_project 5 100543533 100573677 - MGP_CBAJ_P0072236 Sdad1 protein_coding protein_coding MGP_CBAJ_T0072237.1 MGP_CBAJ_G0029416.1 mouse_genomes_project 5 100546265 100573547 - MGP_CBAJ_P0072237 Sdad1 protein_coding protein_coding MGP_CBAJ_T0072238.1 MGP_CBAJ_G0029416.1 mouse_genomes_project 5 100554478 100559796 - Sdad1 protein_coding retained_intron MGP_CBAJ_T0072239.1 MGP_CBAJ_G0029416.1 mouse_genomes_project 5 100555305 100563924 - Sdad1 protein_coding retained_intron MGP_CBAJ_T0072240.1 MGP_CBAJ_G0029416.1 mouse_genomes_project 5 100565242 100573642 - Sdad1 protein_coding retained_intron MGP_CBAJ_T0072241.1 MGP_CBAJ_G0029416.1 mouse_genomes_project 5 100567260 100568308 - Sdad1 protein_coding retained_intron MGP_CBAJ_T0072242.1 MGP_CBAJ_G0029416.1 mouse_genomes_project 5 100569384 100574133 - MGP_CBAJ_P0072242 Sdad1 protein_coding protein_coding MGP_CBAJ_T0004731.1 MGP_CBAJ_G0004073.1 mouse_genomes_project 5 133659434 133660741 - Gm43579 antisense antisense MGP_CBAJ_T0004695.1 MGP_CBAJ_G0004051.1 mouse_genomes_project 5 124403488 124411892 + 1700095B10Rik antisense antisense MGP_CBAJ_T0004696.1 MGP_CBAJ_G0004051.1 mouse_genomes_project 5 124403496 124405888 + 1700095B10Rik antisense antisense MGP_CBAJ_T0004697.1 MGP_CBAJ_G0004051.1 mouse_genomes_project 5 124403505 124411840 + 1700095B10Rik antisense antisense MGP_CBAJ_T0004698.1 MGP_CBAJ_G0004051.1 mouse_genomes_project 5 124403528 124406139 + 1700095B10Rik antisense antisense MGP_CBAJ_T0001843.1 MGP_CBAJ_G0001759.1 mouse_genomes_project 5 150370055 150373071 - TEC TEC MGP_CBAJ_T0070075.1 MGP_CBAJ_G0029015.1 mouse_genomes_project 5 24220583 24228275 + MGP_CBAJ_P0070075 Chpf2 protein_coding protein_coding MGP_CBAJ_T0070076.1 MGP_CBAJ_G0029015.1 mouse_genomes_project 5 24220584 24223052 + Chpf2 protein_coding processed_transcript MGP_CBAJ_T0070077.1 MGP_CBAJ_G0029015.1 mouse_genomes_project 5 24220592 24226364 + MGP_CBAJ_P0070077 Chpf2 protein_coding protein_coding MGP_CBAJ_T0070078.1 MGP_CBAJ_G0029015.1 mouse_genomes_project 5 24220614 24222089 + Chpf2 protein_coding processed_transcript MGP_CBAJ_T0070079.1 MGP_CBAJ_G0029015.1 mouse_genomes_project 5 24220667 24225099 + MGP_CBAJ_P0070079 Chpf2 protein_coding protein_coding MGP_CBAJ_T0070083.1 MGP_CBAJ_G0029015.1 mouse_genomes_project 5 24227366 24228436 + Chpf2 protein_coding processed_transcript MGP_CBAJ_T0014668.1 MGP_CBAJ_G0012780.1 mouse_genomes_project 5 20814383 20814884 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0075599.1 MGP_CBAJ_G0030073.1 mouse_genomes_project 5 167232835 167248624 - MGP_CBAJ_P0075599 Hmgb1 protein_coding unknown_likely_coding MGP_CBAJ_T0075600.1 MGP_CBAJ_G0030073.1 mouse_genomes_project 5 167235523 167423709 - MGP_CBAJ_P0075600 Hmgb1 protein_coding protein_coding MGP_CBAJ_T0075601.1 MGP_CBAJ_G0030073.1 mouse_genomes_project 5 167235523 167244901 - MGP_CBAJ_P0075601 Hmgb1 protein_coding protein_coding MGP_CBAJ_T0075602.1 MGP_CBAJ_G0030073.1 mouse_genomes_project 5 167235837 167240639 - Hmgb1 protein_coding retained_intron MGP_CBAJ_T0075603.1 MGP_CBAJ_G0030073.1 mouse_genomes_project 5 167236085 167248575 - MGP_CBAJ_P0075603 Hmgb1 protein_coding protein_coding MGP_CBAJ_T0075604.1 MGP_CBAJ_G0030073.1 mouse_genomes_project 5 167236508 167247941 - MGP_CBAJ_P0075604 Hmgb1 protein_coding protein_coding MGP_CBAJ_T0075605.1 MGP_CBAJ_G0030073.1 mouse_genomes_project 5 167236752 167248580 - Hmgb1 protein_coding retained_intron MGP_CBAJ_T0075606.1 MGP_CBAJ_G0030073.1 mouse_genomes_project 5 167236999 167249076 - MGP_CBAJ_P0075606 Hmgb1 protein_coding protein_coding MGP_CBAJ_T0075607.1 MGP_CBAJ_G0030073.1 mouse_genomes_project 5 167240564 167248545 - Hmgb1 protein_coding retained_intron MGP_CBAJ_T0072149.1 MGP_CBAJ_G0029390.1 mouse_genomes_project 5 98455374 98470357 + MGP_CBAJ_P0072149 Alb protein_coding protein_coding MGP_CBAJ_T0072150.1 MGP_CBAJ_G0029390.1 mouse_genomes_project 5 98456796 98457200 + Alb protein_coding processed_transcript MGP_CBAJ_T0072151.1 MGP_CBAJ_G0029390.1 mouse_genomes_project 5 98457177 98468416 + Alb protein_coding processed_transcript MGP_CBAJ_T0001676.1 MGP_CBAJ_G0001594.1 mouse_genomes_project 5 100136520 100139216 - TEC TEC MGP_CBAJ_T0014663.1 MGP_CBAJ_G0012775.1 mouse_genomes_project 5 19899349 19899724 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004714.1 MGP_CBAJ_G0004064.1 mouse_genomes_project 5 128767687 128798698 + Srrm4os antisense antisense MGP_CBAJ_T0004715.1 MGP_CBAJ_G0004064.1 mouse_genomes_project 5 128767687 128795309 + Srrm4os antisense antisense MGP_CBAJ_T0101134.1 MGP_CBAJ_G0039327.1 mouse_genomes_project 5 70825256 70825635 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0008335.1 MGP_CBAJ_G0006752.1 mouse_genomes_project 5 164304438 164317895 - Gm34333 lincRNA lincRNA MGP_CBAJ_T0014806.1 MGP_CBAJ_G0012918.1 mouse_genomes_project 5 79011730 79012619 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100607.1 MGP_CBAJ_G0038862.1 mouse_genomes_project 5 60588541 60588664 + Gm24902 snoRNA snoRNA MGP_CBAJ_T0071538.1 MGP_CBAJ_G0029260.1 mouse_genomes_project 5 71469714 71732336 + Limch1 protein_coding retained_intron MGP_CBAJ_T0071539.1 MGP_CBAJ_G0029260.1 mouse_genomes_project 5 71469754 71472283 + Limch1 protein_coding retained_intron MGP_CBAJ_T0071540.1 MGP_CBAJ_G0029260.1 mouse_genomes_project 5 71469770 71814838 + MGP_CBAJ_P0071540 Limch1 protein_coding protein_coding MGP_CBAJ_T0071541.1 MGP_CBAJ_G0029260.1 mouse_genomes_project 5 71469776 71707756 + MGP_CBAJ_P0071541 Limch1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071542.1 MGP_CBAJ_G0029260.1 mouse_genomes_project 5 71469797 71815929 + MGP_CBAJ_P0071542 Limch1 protein_coding protein_coding MGP_CBAJ_T0071543.1 MGP_CBAJ_G0029260.1 mouse_genomes_project 5 71639782 71726827 + MGP_CBAJ_P0071543 Limch1 protein_coding protein_coding MGP_CBAJ_T0071544.1 MGP_CBAJ_G0029260.1 mouse_genomes_project 5 71725678 71813457 + Limch1 protein_coding processed_transcript MGP_CBAJ_T0071545.1 MGP_CBAJ_G0029260.1 mouse_genomes_project 5 71726089 71815920 + MGP_CBAJ_P0071545 Limch1 protein_coding protein_coding MGP_CBAJ_T0071546.1 MGP_CBAJ_G0029260.1 mouse_genomes_project 5 71726238 71796051 + Limch1 protein_coding retained_intron MGP_CBAJ_T0071547.1 MGP_CBAJ_G0029260.1 mouse_genomes_project 5 71726250 71756349 + MGP_CBAJ_P0071547 Limch1 protein_coding protein_coding MGP_CBAJ_T0071548.1 MGP_CBAJ_G0029260.1 mouse_genomes_project 5 71726323 71732589 + Limch1 protein_coding retained_intron MGP_CBAJ_T0071549.1 MGP_CBAJ_G0029260.1 mouse_genomes_project 5 71726634 71756379 + MGP_CBAJ_P0071549 Limch1 protein_coding protein_coding MGP_CBAJ_T0071550.1 MGP_CBAJ_G0029260.1 mouse_genomes_project 5 71734691 71756825 + Limch1 protein_coding processed_transcript MGP_CBAJ_T0071551.1 MGP_CBAJ_G0029260.1 mouse_genomes_project 5 71754679 71756930 + Limch1 protein_coding retained_intron MGP_CBAJ_T0071552.1 MGP_CBAJ_G0029260.1 mouse_genomes_project 5 71803107 71813409 + Limch1 protein_coding processed_transcript MGP_CBAJ_T0071553.1 MGP_CBAJ_G0029260.1 mouse_genomes_project 5 71803162 71813404 + MGP_CBAJ_P0071553 Limch1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0008342.1 MGP_CBAJ_G0006759.1 mouse_genomes_project 5 166843206 166857546 + lincRNA lincRNA MGP_CBAJ_T0017913.1 MGP_CBAJ_G0015349.1 mouse_genomes_project 5 116796794 116942429 - Gm28039 processed_transcript processed_transcript MGP_CBAJ_T0069747.1 MGP_CBAJ_G0028949.1 mouse_genomes_project 5 6561801 6635993 + MGP_CBAJ_P0069747 Abcb4 protein_coding protein_coding MGP_CBAJ_T0069748.1 MGP_CBAJ_G0028949.1 mouse_genomes_project 5 6561805 6569394 + Abcb4 protein_coding retained_intron MGP_CBAJ_T0069749.1 MGP_CBAJ_G0028949.1 mouse_genomes_project 5 6562033 6612555 + MGP_CBAJ_P0069749 Abcb4 protein_coding protein_coding MGP_CBAJ_T0069750.1 MGP_CBAJ_G0028949.1 mouse_genomes_project 5 6598318 6603496 + Abcb4 protein_coding retained_intron MGP_CBAJ_T0069751.1 MGP_CBAJ_G0028949.1 mouse_genomes_project 5 6632349 6635998 + Abcb4 protein_coding retained_intron MGP_CBAJ_T0071124.1 MGP_CBAJ_G0029196.1 mouse_genomes_project 5 45853291 45856213 - MGP_CBAJ_P0071124 Fgfbp1 protein_coding protein_coding MGP_CBAJ_T0071125.1 MGP_CBAJ_G0029196.1 mouse_genomes_project 5 45853293 45856198 - MGP_CBAJ_P0071125 Fgfbp1 protein_coding protein_coding MGP_CBAJ_T0071126.1 MGP_CBAJ_G0029196.1 mouse_genomes_project 5 45853296 45855487 - MGP_CBAJ_P0071126 Fgfbp1 protein_coding protein_coding MGP_CBAJ_T0074134.1 MGP_CBAJ_G0029775.1 mouse_genomes_project 5 139528903 139549135 - MGP_CBAJ_P0074134 Dhx37 protein_coding protein_coding MGP_CBAJ_T0074135.1 MGP_CBAJ_G0029775.1 mouse_genomes_project 5 139529804 139530914 - MGP_CBAJ_P0074135 Dhx37 protein_coding protein_coding MGP_CBAJ_T0074136.1 MGP_CBAJ_G0029775.1 mouse_genomes_project 5 139531316 139533866 - Dhx37 protein_coding retained_intron MGP_CBAJ_T0074137.1 MGP_CBAJ_G0029775.1 mouse_genomes_project 5 139538579 139541749 - MGP_CBAJ_P0074137 Dhx37 protein_coding nonsense_mediated_decay MGP_CBAJ_T0001419.1 MGP_CBAJ_G0001343.1 mouse_genomes_project 5 12922710 12927375 + TEC TEC MGP_CBAJ_T0001775.1 MGP_CBAJ_G0001693.1 mouse_genomes_project 5 136450291 136457854 + TEC TEC MGP_CBAJ_T0101325.1 MGP_CBAJ_G0039422.1 mouse_genomes_project 5 33140881 33147630 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101326.1 MGP_CBAJ_G0039422.1 mouse_genomes_project 5 33140885 33147686 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0001569.1 MGP_CBAJ_G0001489.1 mouse_genomes_project 5 61359508 61362103 + TEC TEC MGP_CBAJ_T0004612.1 MGP_CBAJ_G0003988.1 mouse_genomes_project 5 55294265 55295514 + Gm43685 antisense antisense MGP_CBAJ_T0004693.1 MGP_CBAJ_G0004049.1 mouse_genomes_project 5 122779062 122779837 - Gm43118 antisense antisense MGP_CBAJ_T0075516.1 MGP_CBAJ_G0030058.1 mouse_genomes_project 5 164876859 164878893 + MGP_CBAJ_P0075516 Polr1d protein_coding protein_coding MGP_CBAJ_T0075517.1 MGP_CBAJ_G0030058.1 mouse_genomes_project 5 164877155 164916300 + MGP_CBAJ_P0075517 Polr1d protein_coding protein_coding MGP_CBAJ_T0075518.1 MGP_CBAJ_G0030058.1 mouse_genomes_project 5 164877357 164916536 + MGP_CBAJ_P0075518 Polr1d protein_coding protein_coding MGP_CBAJ_T0075519.1 MGP_CBAJ_G0030058.1 mouse_genomes_project 5 164877373 164916513 + MGP_CBAJ_P0075519 Polr1d protein_coding nonsense_mediated_decay MGP_CBAJ_T0075520.1 MGP_CBAJ_G0030058.1 mouse_genomes_project 5 164906112 164915810 + Polr1d protein_coding retained_intron MGP_CBAJ_T0075521.1 MGP_CBAJ_G0030058.1 mouse_genomes_project 5 164910315 164915926 + Polr1d protein_coding processed_transcript MGP_CBAJ_T0001585.1 MGP_CBAJ_G0001505.1 mouse_genomes_project 5 67915621 67920346 - TEC TEC MGP_CBAJ_T0001586.1 MGP_CBAJ_G0001505.1 mouse_genomes_project 5 67919401 67919716 - TEC TEC MGP_CBAJ_T0073152.1 MGP_CBAJ_G0029602.1 mouse_genomes_project 5 126352600 126364372 + MGP_CBAJ_P0073152 Mvk protein_coding protein_coding MGP_CBAJ_T0073153.1 MGP_CBAJ_G0029602.1 mouse_genomes_project 5 126352617 126371693 + MGP_CBAJ_P0073153 Mvk protein_coding protein_coding MGP_CBAJ_T0073154.1 MGP_CBAJ_G0029602.1 mouse_genomes_project 5 126352625 126371800 + Mvk protein_coding retained_intron MGP_CBAJ_T0073155.1 MGP_CBAJ_G0029602.1 mouse_genomes_project 5 126352634 126364372 + MGP_CBAJ_P0073155 Mvk protein_coding protein_coding MGP_CBAJ_T0073156.1 MGP_CBAJ_G0029602.1 mouse_genomes_project 5 126352634 126366701 + MGP_CBAJ_P0073156 Mvk protein_coding protein_coding MGP_CBAJ_T0073157.1 MGP_CBAJ_G0029602.1 mouse_genomes_project 5 126352637 126371807 + MGP_CBAJ_P0073157 Mvk protein_coding protein_coding MGP_CBAJ_T0073158.1 MGP_CBAJ_G0029602.1 mouse_genomes_project 5 126360931 126371788 + MGP_CBAJ_P0073158 Mvk protein_coding protein_coding MGP_CBAJ_T0004574.1 MGP_CBAJ_G0003959.1 mouse_genomes_project 5 31960674 31961994 - 4930566F21Rik antisense antisense MGP_CBAJ_T0004575.1 MGP_CBAJ_G0003959.1 mouse_genomes_project 5 31960678 31969218 - 4930566F21Rik antisense antisense MGP_CBAJ_T0001623.1 MGP_CBAJ_G0001542.1 mouse_genomes_project 5 71727102 71729259 + TEC TEC MGP_CBAJ_T0075290.1 MGP_CBAJ_G0030000.1 mouse_genomes_project 5 160636515 160665618 - MGP_CBAJ_P0075290 Rac1 protein_coding protein_coding MGP_CBAJ_T0075291.1 MGP_CBAJ_G0030000.1 mouse_genomes_project 5 160638363 160665575 - MGP_CBAJ_P0075291 Rac1 protein_coding protein_coding MGP_CBAJ_T0075292.1 MGP_CBAJ_G0030000.1 mouse_genomes_project 5 160640921 160655746 - Rac1 protein_coding processed_transcript MGP_CBAJ_T0075293.1 MGP_CBAJ_G0030000.1 mouse_genomes_project 5 160644599 160665379 - MGP_CBAJ_P0075293 Rac1 protein_coding unknown_likely_coding MGP_CBAJ_T0075294.1 MGP_CBAJ_G0030000.1 mouse_genomes_project 5 160652269 160655172 - Rac1 protein_coding processed_transcript MGP_CBAJ_T0008242.1 MGP_CBAJ_G0006691.1 mouse_genomes_project 5 132841982 132843774 + Gm43269 lincRNA lincRNA MGP_CBAJ_T0017942.1 MGP_CBAJ_G0015358.1 mouse_genomes_project 5 167129159 167138704 - 1810059H22Rik processed_transcript lincRNA MGP_CBAJ_T0017943.1 MGP_CBAJ_G0015358.1 mouse_genomes_project 5 167130055 167131908 - 1810059H22Rik processed_transcript retained_intron MGP_CBAJ_T0017944.1 MGP_CBAJ_G0015358.1 mouse_genomes_project 5 167137091 167138198 - 1810059H22Rik processed_transcript lincRNA MGP_CBAJ_T0017945.1 MGP_CBAJ_G0015358.1 mouse_genomes_project 5 167137163 167148329 - 1810059H22Rik processed_transcript lincRNA MGP_CBAJ_T0017946.1 MGP_CBAJ_G0015358.1 mouse_genomes_project 5 167137382 167138174 - 1810059H22Rik processed_transcript retained_intron MGP_CBAJ_T0017947.1 MGP_CBAJ_G0015358.1 mouse_genomes_project 5 167137625 167142747 - 1810059H22Rik processed_transcript retained_intron MGP_CBAJ_T0017948.1 MGP_CBAJ_G0015358.1 mouse_genomes_project 5 167142414 167148343 - 1810059H22Rik processed_transcript lincRNA MGP_CBAJ_T0017949.1 MGP_CBAJ_G0015358.1 mouse_genomes_project 5 167143233 167148569 - 1810059H22Rik processed_transcript lincRNA MGP_CBAJ_T0070498.1 MGP_CBAJ_G0029091.1 mouse_genomes_project 5 31920855 31940935 + MGP_CBAJ_P0070498 protein_coding protein_coding MGP_CBAJ_T0070499.1 MGP_CBAJ_G0029091.1 mouse_genomes_project 5 31920859 31956032 + MGP_CBAJ_P0070499 protein_coding protein_coding MGP_CBAJ_T0070500.1 MGP_CBAJ_G0029091.1 mouse_genomes_project 5 31920874 31947734 + MGP_CBAJ_P0070500 protein_coding protein_coding MGP_CBAJ_T0070501.1 MGP_CBAJ_G0029091.1 mouse_genomes_project 5 31920940 31956027 + MGP_CBAJ_P0070501 protein_coding protein_coding MGP_CBAJ_T0070502.1 MGP_CBAJ_G0029091.1 mouse_genomes_project 5 31938355 31947121 + MGP_CBAJ_P0070502 protein_coding protein_coding MGP_CBAJ_T0008003.1 MGP_CBAJ_G0006514.1 mouse_genomes_project 5 39236391 39238771 + Gm42505 lincRNA lincRNA MGP_CBAJ_T0001816.1 MGP_CBAJ_G0001733.1 mouse_genomes_project 5 146663582 146664737 - TEC TEC MGP_CBAJ_T0073029.1 MGP_CBAJ_G0029579.1 mouse_genomes_project 5 124928637 124942769 + MGP_CBAJ_P0073029 Tmem211 protein_coding protein_coding MGP_CBAJ_T0069643.1 MGP_CBAJ_G0028935.1 mouse_genomes_project 5 2806043 2830552 - MGP_CBAJ_P0069643 Gtpbp10 protein_coding protein_coding MGP_CBAJ_T0069644.1 MGP_CBAJ_G0028935.1 mouse_genomes_project 5 2809012 2830537 - MGP_CBAJ_P0069644 Gtpbp10 protein_coding protein_coding MGP_CBAJ_T0069645.1 MGP_CBAJ_G0028935.1 mouse_genomes_project 5 2809242 2830527 - MGP_CBAJ_P0069645 Gtpbp10 protein_coding protein_coding MGP_CBAJ_T0069646.1 MGP_CBAJ_G0028935.1 mouse_genomes_project 5 2811693 2813983 - Gtpbp10 protein_coding retained_intron MGP_CBAJ_T0069647.1 MGP_CBAJ_G0028935.1 mouse_genomes_project 5 2811713 2813238 - Gtpbp10 protein_coding retained_intron MGP_CBAJ_T0069648.1 MGP_CBAJ_G0028935.1 mouse_genomes_project 5 2812130 2828256 - MGP_CBAJ_P0069648 Gtpbp10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069649.1 MGP_CBAJ_G0028935.1 mouse_genomes_project 5 2813857 2830475 - MGP_CBAJ_P0069649 Gtpbp10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069650.1 MGP_CBAJ_G0028935.1 mouse_genomes_project 5 2813901 2826768 - Gtpbp10 protein_coding retained_intron MGP_CBAJ_T0069651.1 MGP_CBAJ_G0028935.1 mouse_genomes_project 5 2813938 2817061 - Gtpbp10 protein_coding retained_intron MGP_CBAJ_T0069652.1 MGP_CBAJ_G0028935.1 mouse_genomes_project 5 2816142 2830496 - MGP_CBAJ_P0069652 Gtpbp10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069653.1 MGP_CBAJ_G0028935.1 mouse_genomes_project 5 2829882 2830530 - MGP_CBAJ_P0069653 Gtpbp10 protein_coding protein_coding MGP_CBAJ_T0071858.1 MGP_CBAJ_G0029317.1 mouse_genomes_project 5 82813602 82852508 - MGP_CBAJ_P0071858 Aasdh protein_coding nonsense_mediated_decay MGP_CBAJ_T0071859.1 MGP_CBAJ_G0029317.1 mouse_genomes_project 5 82815878 82816611 - Aasdh protein_coding processed_transcript MGP_CBAJ_T0071860.1 MGP_CBAJ_G0029317.1 mouse_genomes_project 5 82815878 82852595 - MGP_CBAJ_P0071860 Aasdh protein_coding protein_coding MGP_CBAJ_T0071861.1 MGP_CBAJ_G0029317.1 mouse_genomes_project 5 82815883 82852594 - MGP_CBAJ_P0071861 Aasdh protein_coding nonsense_mediated_decay MGP_CBAJ_T0071862.1 MGP_CBAJ_G0029317.1 mouse_genomes_project 5 82815929 82849346 - MGP_CBAJ_P0071862 Aasdh protein_coding protein_coding MGP_CBAJ_T0071863.1 MGP_CBAJ_G0029317.1 mouse_genomes_project 5 82816111 82824534 - MGP_CBAJ_P0071863 Aasdh protein_coding protein_coding MGP_CBAJ_T0071864.1 MGP_CBAJ_G0029317.1 mouse_genomes_project 5 82822179 82852573 - Aasdh protein_coding retained_intron MGP_CBAJ_T0071865.1 MGP_CBAJ_G0029317.1 mouse_genomes_project 5 82824990 82852568 - MGP_CBAJ_P0071865 Aasdh protein_coding protein_coding MGP_CBAJ_T0071866.1 MGP_CBAJ_G0029317.1 mouse_genomes_project 5 82825005 82826795 - Aasdh protein_coding retained_intron MGP_CBAJ_T0071867.1 MGP_CBAJ_G0029317.1 mouse_genomes_project 5 82839771 82842218 - Aasdh protein_coding retained_intron MGP_CBAJ_T0071868.1 MGP_CBAJ_G0029317.1 mouse_genomes_project 5 82841589 82852573 - Aasdh protein_coding processed_transcript MGP_CBAJ_T0071869.1 MGP_CBAJ_G0029317.1 mouse_genomes_project 5 82843403 82852573 - Aasdh protein_coding retained_intron MGP_CBAJ_T0071870.1 MGP_CBAJ_G0029317.1 mouse_genomes_project 5 82849164 82852471 - MGP_CBAJ_P0071870 Aasdh protein_coding protein_coding MGP_CBAJ_T0071871.1 MGP_CBAJ_G0029317.1 mouse_genomes_project 5 82849253 82852584 - MGP_CBAJ_P0071871 Aasdh protein_coding protein_coding MGP_CBAJ_T0071872.1 MGP_CBAJ_G0029317.1 mouse_genomes_project 5 82851408 82852509 - Aasdh protein_coding processed_transcript MGP_CBAJ_T0008266.1 MGP_CBAJ_G0006706.1 mouse_genomes_project 5 140135030 140139004 - Gm42945 lincRNA lincRNA MGP_CBAJ_T0008267.1 MGP_CBAJ_G0006706.1 mouse_genomes_project 5 140135044 140142488 - Gm42945 lincRNA lincRNA MGP_CBAJ_T0071790.1 MGP_CBAJ_G0029305.1 mouse_genomes_project 5 80805463 80807756 + MGP_CBAJ_P0071790 Gsx2 protein_coding protein_coding MGP_CBAJ_T0071791.1 MGP_CBAJ_G0029305.1 mouse_genomes_project 5 80805464 80807488 + MGP_CBAJ_P0071791 Gsx2 protein_coding protein_coding MGP_CBAJ_T0001626.1 MGP_CBAJ_G0001545.1 mouse_genomes_project 5 72421735 72422345 - TEC TEC MGP_CBAJ_T0008100.1 MGP_CBAJ_G0006595.1 mouse_genomes_project 5 101146825 101152872 - 4932430I15Rik lincRNA lincRNA MGP_CBAJ_T0014892.1 MGP_CBAJ_G0013004.1 mouse_genomes_project 5 119402857 119404260 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0071099.1 MGP_CBAJ_G0029191.1 mouse_genomes_project 5 45330189 45448482 + MGP_CBAJ_P0071099 C1qtnf7 protein_coding protein_coding MGP_CBAJ_T0071100.1 MGP_CBAJ_G0029191.1 mouse_genomes_project 5 45330413 45435870 + MGP_CBAJ_P0071100 C1qtnf7 protein_coding protein_coding MGP_CBAJ_T0071101.1 MGP_CBAJ_G0029191.1 mouse_genomes_project 5 45428519 45446275 + MGP_CBAJ_P0071101 C1qtnf7 protein_coding protein_coding MGP_CBAJ_T0001726.1 MGP_CBAJ_G0001644.1 mouse_genomes_project 5 124775476 124776040 + TEC TEC MGP_CBAJ_T0072189.1 MGP_CBAJ_G0029404.1 mouse_genomes_project 5 99123335 99141568 + MGP_CBAJ_P0072189 Ereg protein_coding protein_coding MGP_CBAJ_T0001409.1 MGP_CBAJ_G0001333.1 mouse_genomes_project 5 10147441 10150300 - TEC TEC MGP_CBAJ_T0014803.1 MGP_CBAJ_G0012915.1 mouse_genomes_project 5 78096697 78097007 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100635.1 MGP_CBAJ_G0038890.1 mouse_genomes_project 5 121634944 121635096 + Gm26277 snoRNA snoRNA MGP_CBAJ_T0014649.1 MGP_CBAJ_G0012761.1 mouse_genomes_project 5 12123915 12125217 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014878.1 MGP_CBAJ_G0012990.1 mouse_genomes_project 5 116140447 116141170 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011464.1 MGP_CBAJ_G0009602.1 mouse_genomes_project 5 29857308 29857637 + Gm26346 misc_RNA misc_RNA MGP_CBAJ_T0074844.1 MGP_CBAJ_G0029902.1 mouse_genomes_project 5 153553419 153554953 + MGP_CBAJ_P0074844 Sap25 protein_coding protein_coding MGP_CBAJ_T0074845.1 MGP_CBAJ_G0029902.1 mouse_genomes_project 5 153553522 153554987 + MGP_CBAJ_P0074845 Sap25 protein_coding protein_coding MGP_CBAJ_T0074846.1 MGP_CBAJ_G0029902.1 mouse_genomes_project 5 153553580 153554426 + Sap25 protein_coding retained_intron MGP_CBAJ_T0074847.1 MGP_CBAJ_G0029902.1 mouse_genomes_project 5 153554028 153554632 + Sap25 protein_coding retained_intron MGP_CBAJ_T0074848.1 MGP_CBAJ_G0029902.1 mouse_genomes_project 5 153554262 153554922 + Sap25 protein_coding retained_intron MGP_CBAJ_T0074849.1 MGP_CBAJ_G0029902.1 mouse_genomes_project 5 153554433 153554984 + Sap25 protein_coding retained_intron MGP_CBAJ_T0075286.1 MGP_CBAJ_G0029999.1 mouse_genomes_project 5 160591306 160638824 + MGP_CBAJ_P0075286 Daglb protein_coding protein_coding MGP_CBAJ_T0075287.1 MGP_CBAJ_G0029999.1 mouse_genomes_project 5 160591335 160602075 + Daglb protein_coding retained_intron MGP_CBAJ_T0075288.1 MGP_CBAJ_G0029999.1 mouse_genomes_project 5 160599639 160604522 + Daglb protein_coding retained_intron MGP_CBAJ_T0075289.1 MGP_CBAJ_G0029999.1 mouse_genomes_project 5 160619026 160622343 + Daglb protein_coding retained_intron MGP_CBAJ_T0072541.1 MGP_CBAJ_G0029476.1 mouse_genomes_project 5 113872007 113883576 + MGP_CBAJ_P0072541 Nudt9 protein_coding protein_coding MGP_CBAJ_T0072542.1 MGP_CBAJ_G0029476.1 mouse_genomes_project 5 113872229 113885156 + MGP_CBAJ_P0072542 Nudt9 protein_coding protein_coding MGP_CBAJ_T0072543.1 MGP_CBAJ_G0029476.1 mouse_genomes_project 5 113872572 113890775 + MGP_CBAJ_P0072543 Nudt9 protein_coding protein_coding MGP_CBAJ_T0072544.1 MGP_CBAJ_G0029476.1 mouse_genomes_project 5 113872671 113883810 + Nudt9 protein_coding retained_intron MGP_CBAJ_T0072545.1 MGP_CBAJ_G0029476.1 mouse_genomes_project 5 113872857 113883556 + MGP_CBAJ_P0072545 Nudt9 protein_coding protein_coding MGP_CBAJ_T0072546.1 MGP_CBAJ_G0029476.1 mouse_genomes_project 5 113873324 113880923 + MGP_CBAJ_P0072546 Nudt9 protein_coding protein_coding MGP_CBAJ_T0074914.1 MGP_CBAJ_G0029921.1 mouse_genomes_project 5 154156915 154179352 - MGP_CBAJ_P0074914 Zfp113 protein_coding protein_coding MGP_CBAJ_T0074915.1 MGP_CBAJ_G0029921.1 mouse_genomes_project 5 154163276 154176507 - MGP_CBAJ_P0074915 Zfp113 protein_coding protein_coding MGP_CBAJ_T0074916.1 MGP_CBAJ_G0029921.1 mouse_genomes_project 5 154174116 154179308 - Zfp113 protein_coding retained_intron MGP_CBAJ_T0074917.1 MGP_CBAJ_G0029921.1 mouse_genomes_project 5 154174524 154179312 - MGP_CBAJ_P0074917 Zfp113 protein_coding protein_coding MGP_CBAJ_T0074295.1 MGP_CBAJ_G0029807.1 mouse_genomes_project 5 144918133 144930593 + MGP_CBAJ_P0074295 protein_coding protein_coding MGP_CBAJ_T0074296.1 MGP_CBAJ_G0029807.1 mouse_genomes_project 5 144920796 144933053 + MGP_CBAJ_P0074296 protein_coding protein_coding MGP_CBAJ_T0074297.1 MGP_CBAJ_G0029807.1 mouse_genomes_project 5 144920892 144932929 + MGP_CBAJ_P0074297 protein_coding protein_coding MGP_CBAJ_T0074298.1 MGP_CBAJ_G0029807.1 mouse_genomes_project 5 144923981 144947197 + MGP_CBAJ_P0074298 protein_coding unknown_likely_coding MGP_CBAJ_T0004789.1 MGP_CBAJ_G0004115.1 mouse_genomes_project 5 155390145 155395451 + 6330403L08Rik antisense antisense MGP_CBAJ_T0004790.1 MGP_CBAJ_G0004115.1 mouse_genomes_project 5 155390145 155395450 + 6330403L08Rik antisense antisense MGP_CBAJ_T0070333.1 MGP_CBAJ_G0029068.1 mouse_genomes_project 5 31243911 31255564 - MGP_CBAJ_P0070333 Cgref1 protein_coding protein_coding MGP_CBAJ_T0070334.1 MGP_CBAJ_G0029068.1 mouse_genomes_project 5 31245986 31255379 - Cgref1 protein_coding retained_intron MGP_CBAJ_T0014818.1 MGP_CBAJ_G0012930.1 mouse_genomes_project 5 83354846 83355129 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001756.1 MGP_CBAJ_G0001674.1 mouse_genomes_project 5 131765311 131767748 - TEC TEC MGP_CBAJ_T0069894.1 MGP_CBAJ_G0028981.1 mouse_genomes_project 5 20647407 20855815 - MGP_CBAJ_P0069894 Fbxl13 protein_coding protein_coding MGP_CBAJ_T0069895.1 MGP_CBAJ_G0028981.1 mouse_genomes_project 5 20653760 20855797 - Fbxl13 protein_coding retained_intron MGP_CBAJ_T0069896.1 MGP_CBAJ_G0028981.1 mouse_genomes_project 5 20687555 20855765 - MGP_CBAJ_P0069896 Fbxl13 protein_coding protein_coding MGP_CBAJ_T0069899.1 MGP_CBAJ_G0028981.1 mouse_genomes_project 5 20756868 20760984 - Fbxl13 protein_coding processed_transcript MGP_CBAJ_T0069900.1 MGP_CBAJ_G0028981.1 mouse_genomes_project 5 20853759 20855844 - Fbxl13 protein_coding retained_intron MGP_CBAJ_T0008058.1 MGP_CBAJ_G0006561.1 mouse_genomes_project 5 78760391 78775947 - 1700025M24Rik lincRNA lincRNA MGP_CBAJ_T0008059.1 MGP_CBAJ_G0006561.1 mouse_genomes_project 5 78760391 78775935 - 1700025M24Rik lincRNA lincRNA MGP_CBAJ_T0008060.1 MGP_CBAJ_G0006561.1 mouse_genomes_project 5 78760409 78775941 - 1700025M24Rik lincRNA lincRNA MGP_CBAJ_T0074321.1 MGP_CBAJ_G0029814.1 mouse_genomes_project 5 146362878 146466234 - MGP_CBAJ_P0074321 Auts2 protein_coding protein_coding MGP_CBAJ_T0074322.1 MGP_CBAJ_G0029814.1 mouse_genomes_project 5 146362887 147552642 - Auts2 protein_coding processed_transcript MGP_CBAJ_T0074323.1 MGP_CBAJ_G0029814.1 mouse_genomes_project 5 146363382 147551955 - Auts2 protein_coding processed_transcript MGP_CBAJ_T0074324.1 MGP_CBAJ_G0029814.1 mouse_genomes_project 5 146364657 147043324 - Auts2 protein_coding processed_transcript MGP_CBAJ_T0074325.1 MGP_CBAJ_G0029814.1 mouse_genomes_project 5 146364889 146407020 - MGP_CBAJ_P0074325 Auts2 protein_coding protein_coding MGP_CBAJ_T0074326.1 MGP_CBAJ_G0029814.1 mouse_genomes_project 5 146364993 147551163 - Auts2 protein_coding processed_transcript MGP_CBAJ_T0074327.1 MGP_CBAJ_G0029814.1 mouse_genomes_project 5 146365906 146387921 - MGP_CBAJ_P0074327 Auts2 protein_coding protein_coding MGP_CBAJ_T0074328.1 MGP_CBAJ_G0029814.1 mouse_genomes_project 5 146371001 146383681 - Auts2 protein_coding processed_transcript MGP_CBAJ_T0074329.1 MGP_CBAJ_G0029814.1 mouse_genomes_project 5 146397426 146399175 - Auts2 protein_coding retained_intron MGP_CBAJ_T0074330.1 MGP_CBAJ_G0029814.1 mouse_genomes_project 5 146405322 146468556 - Auts2 protein_coding retained_intron MGP_CBAJ_T0074331.1 MGP_CBAJ_G0029814.1 mouse_genomes_project 5 146406737 146464983 - Auts2 protein_coding processed_transcript MGP_CBAJ_T0074332.1 MGP_CBAJ_G0029814.1 mouse_genomes_project 5 146464896 146468591 - Auts2 protein_coding retained_intron MGP_CBAJ_T0074333.1 MGP_CBAJ_G0029814.1 mouse_genomes_project 5 146740196 147551702 - Auts2 protein_coding retained_intron MGP_CBAJ_T0074334.1 MGP_CBAJ_G0029814.1 mouse_genomes_project 5 147018424 147022048 - Auts2 protein_coding retained_intron MGP_CBAJ_T0074335.1 MGP_CBAJ_G0029814.1 mouse_genomes_project 5 147019400 147551319 - Auts2 protein_coding processed_transcript MGP_CBAJ_T0074336.1 MGP_CBAJ_G0029814.1 mouse_genomes_project 5 147024330 147043396 - MGP_CBAJ_P0074336 Auts2 protein_coding protein_coding MGP_CBAJ_T0074337.1 MGP_CBAJ_G0029814.1 mouse_genomes_project 5 147024411 147446990 - MGP_CBAJ_P0074337 Auts2 protein_coding protein_coding MGP_CBAJ_T0074338.1 MGP_CBAJ_G0029814.1 mouse_genomes_project 5 147042716 147552095 - Auts2 protein_coding retained_intron MGP_CBAJ_T0074339.1 MGP_CBAJ_G0029814.1 mouse_genomes_project 5 147550806 147551115 - MGP_CBAJ_P0074339 Auts2 protein_coding protein_coding MGP_CBAJ_T0070538.1 MGP_CBAJ_G0029097.1 mouse_genomes_project 5 32121173 32137197 - Rbks protein_coding processed_transcript MGP_CBAJ_T0070539.1 MGP_CBAJ_G0029097.1 mouse_genomes_project 5 32121173 32198823 - MGP_CBAJ_P0070539 Rbks protein_coding protein_coding MGP_CBAJ_T0070542.1 MGP_CBAJ_G0029097.1 mouse_genomes_project 5 32159681 32185635 - Rbks protein_coding processed_transcript MGP_CBAJ_T0004683.1 MGP_CBAJ_G0004039.1 mouse_genomes_project 5 117756764 117784817 - Gm17202 antisense antisense MGP_CBAJ_T0014954.1 MGP_CBAJ_G0013066.1 mouse_genomes_project 5 154121733 154121935 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0074611.1 MGP_CBAJ_G0029862.1 mouse_genomes_project 5 151590454 151603597 + Upk3bl protein_coding processed_transcript MGP_CBAJ_T0074612.1 MGP_CBAJ_G0029862.1 mouse_genomes_project 5 151593153 151603597 + MGP_CBAJ_P0074612 Upk3bl protein_coding protein_coding MGP_CBAJ_T0074613.1 MGP_CBAJ_G0029862.1 mouse_genomes_project 5 151593229 151603592 + MGP_CBAJ_P0074613 Upk3bl protein_coding protein_coding MGP_CBAJ_T0074614.1 MGP_CBAJ_G0029862.1 mouse_genomes_project 5 151593229 151603599 + MGP_CBAJ_P0074614 Upk3bl protein_coding protein_coding MGP_CBAJ_T0074615.1 MGP_CBAJ_G0029862.1 mouse_genomes_project 5 151596013 151603583 + Upk3bl protein_coding processed_transcript MGP_CBAJ_T0074616.1 MGP_CBAJ_G0029862.1 mouse_genomes_project 5 151596086 151603585 + MGP_CBAJ_P0074616 Upk3bl protein_coding nonsense_mediated_decay MGP_CBAJ_T0004791.1 MGP_CBAJ_G0004116.1 mouse_genomes_project 5 155661504 155662390 - 4930520M14Rik antisense antisense MGP_CBAJ_T0017905.1 MGP_CBAJ_G0015345.1 mouse_genomes_project 5 79632014 79632580 + Usp46os2 processed_transcript retained_intron MGP_CBAJ_T0017906.1 MGP_CBAJ_G0015345.1 mouse_genomes_project 5 79632015 79632580 + Usp46os2 processed_transcript processed_transcript MGP_CBAJ_T0017907.1 MGP_CBAJ_G0015345.1 mouse_genomes_project 5 79632020 79639759 + Usp46os2 processed_transcript antisense MGP_CBAJ_T0073922.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137617624 137632924 - MGP_CBAJ_P0073922 Rsrc2 protein_coding protein_coding MGP_CBAJ_T0073923.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137617930 137632971 - Rsrc2 protein_coding processed_transcript MGP_CBAJ_T0073924.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137618213 137639590 - MGP_CBAJ_P0073924 Rsrc2 protein_coding protein_coding MGP_CBAJ_T0073925.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137618224 137639556 - MGP_CBAJ_P0073925 Rsrc2 protein_coding protein_coding MGP_CBAJ_T0073926.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137618290 137632996 - MGP_CBAJ_P0073926 Rsrc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073927.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137618290 137633783 - MGP_CBAJ_P0073927 Rsrc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073928.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137618290 137633783 - MGP_CBAJ_P0073928 Rsrc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073929.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137618453 137622875 - Rsrc2 protein_coding retained_intron MGP_CBAJ_T0073930.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137619712 137639562 - MGP_CBAJ_P0073930 Rsrc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073931.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137622549 137639588 - MGP_CBAJ_P0073931 Rsrc2 protein_coding protein_coding MGP_CBAJ_T0073932.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137622783 137639558 - MGP_CBAJ_P0073932 Rsrc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073933.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137622783 137639557 - MGP_CBAJ_P0073933 Rsrc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073934.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137624014 137635707 - Rsrc2 protein_coding retained_intron MGP_CBAJ_T0073935.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137624069 137631932 - Rsrc2 protein_coding retained_intron MGP_CBAJ_T0073936.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137625795 137639547 - MGP_CBAJ_P0073936 Rsrc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073937.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137625842 137639588 - MGP_CBAJ_P0073937 Rsrc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073938.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137628849 137639545 - MGP_CBAJ_P0073938 Rsrc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073939.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137631010 137639543 - Rsrc2 protein_coding processed_transcript MGP_CBAJ_T0073940.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137632131 137639557 - Rsrc2 protein_coding retained_intron MGP_CBAJ_T0073941.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137632131 137639557 - Rsrc2 protein_coding retained_intron MGP_CBAJ_T0073942.1 MGP_CBAJ_G0029741.1 mouse_genomes_project 5 137633706 137635368 - Rsrc2 protein_coding retained_intron MGP_CBAJ_T0072277.1 MGP_CBAJ_G0029422.1 mouse_genomes_project 5 100855750 100895051 + MGP_CBAJ_P0072277 Fam47e protein_coding protein_coding MGP_CBAJ_T0072278.1 MGP_CBAJ_G0029422.1 mouse_genomes_project 5 100855783 100894951 + MGP_CBAJ_P0072278 Fam47e protein_coding nonsense_mediated_decay MGP_CBAJ_T0072279.1 MGP_CBAJ_G0029422.1 mouse_genomes_project 5 100872180 100895173 + MGP_CBAJ_P0072279 Fam47e protein_coding protein_coding MGP_CBAJ_T0072280.1 MGP_CBAJ_G0029422.1 mouse_genomes_project 5 100872239 100895569 + MGP_CBAJ_P0072280 Fam47e protein_coding protein_coding MGP_CBAJ_T0072281.1 MGP_CBAJ_G0029422.1 mouse_genomes_project 5 100872240 100895570 + MGP_CBAJ_P0072281 Fam47e protein_coding protein_coding MGP_CBAJ_T0072282.1 MGP_CBAJ_G0029422.1 mouse_genomes_project 5 100872246 100889671 + MGP_CBAJ_P0072282 Fam47e protein_coding protein_coding MGP_CBAJ_T0072283.1 MGP_CBAJ_G0029422.1 mouse_genomes_project 5 100872259 100895022 + MGP_CBAJ_P0072283 Fam47e protein_coding protein_coding MGP_CBAJ_T0072117.1 MGP_CBAJ_G0029384.1 mouse_genomes_project 5 97382693 97442952 + MGP_CBAJ_P0072117 Npffr2 protein_coding protein_coding MGP_CBAJ_T0001611.1 MGP_CBAJ_G0001530.1 mouse_genomes_project 5 70712070 70716320 - TEC TEC MGP_CBAJ_T0074630.1 MGP_CBAJ_G0029864.1 mouse_genomes_project 5 151681979 151688321 + MGP_CBAJ_P0074630 Polr2j protein_coding protein_coding MGP_CBAJ_T0074631.1 MGP_CBAJ_G0029864.1 mouse_genomes_project 5 151681979 151688097 + MGP_CBAJ_P0074631 Polr2j protein_coding protein_coding MGP_CBAJ_T0074632.1 MGP_CBAJ_G0029864.1 mouse_genomes_project 5 151682050 151688310 + MGP_CBAJ_P0074632 Polr2j protein_coding protein_coding MGP_CBAJ_T0014896.1 MGP_CBAJ_G0013008.1 mouse_genomes_project 5 120056971 120058856 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014844.1 MGP_CBAJ_G0012956.1 mouse_genomes_project 5 97350060 97350886 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0073291.1 MGP_CBAJ_G0029632.1 mouse_genomes_project 5 127585628 127608100 + Msi1 protein_coding retained_intron MGP_CBAJ_T0073292.1 MGP_CBAJ_G0029632.1 mouse_genomes_project 5 127585677 127614134 + MGP_CBAJ_P0073292 Msi1 protein_coding protein_coding MGP_CBAJ_T0073293.1 MGP_CBAJ_G0029632.1 mouse_genomes_project 5 127586449 127610043 + MGP_CBAJ_P0073293 Msi1 protein_coding protein_coding MGP_CBAJ_T0073294.1 MGP_CBAJ_G0029632.1 mouse_genomes_project 5 127589236 127591484 + Msi1 protein_coding retained_intron MGP_CBAJ_T0073295.1 MGP_CBAJ_G0029632.1 mouse_genomes_project 5 127589583 127610036 + Msi1 protein_coding retained_intron MGP_CBAJ_T0073296.1 MGP_CBAJ_G0029632.1 mouse_genomes_project 5 127590132 127601306 + Msi1 protein_coding retained_intron MGP_CBAJ_T0073297.1 MGP_CBAJ_G0029632.1 mouse_genomes_project 5 127590828 127610020 + MGP_CBAJ_P0073297 Msi1 protein_coding protein_coding MGP_CBAJ_T0073298.1 MGP_CBAJ_G0029632.1 mouse_genomes_project 5 127591330 127601528 + Msi1 protein_coding retained_intron MGP_CBAJ_T0004593.1 MGP_CBAJ_G0003976.1 mouse_genomes_project 5 44940531 45026368 - Gm7854 antisense antisense MGP_CBAJ_T0004594.1 MGP_CBAJ_G0003976.1 mouse_genomes_project 5 44940531 45025998 - Gm7854 antisense antisense MGP_CBAJ_T0004595.1 MGP_CBAJ_G0003976.1 mouse_genomes_project 5 45026014 45026365 - Gm7854 antisense antisense MGP_CBAJ_T0014695.1 MGP_CBAJ_G0012807.1 mouse_genomes_project 5 26217370 26219183 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001609.1 MGP_CBAJ_G0001528.1 mouse_genomes_project 5 70586001 70587579 + TEC TEC MGP_CBAJ_T0001711.1 MGP_CBAJ_G0001629.1 mouse_genomes_project 5 118068760 118069757 + TEC TEC MGP_CBAJ_T0069835.1 MGP_CBAJ_G0028969.1 mouse_genomes_project 5 16506260 16588114 - MGP_CBAJ_P0069835 Cd36 protein_coding protein_coding MGP_CBAJ_T0069836.1 MGP_CBAJ_G0028969.1 mouse_genomes_project 5 16506586 16573609 - MGP_CBAJ_P0069836 Cd36 protein_coding protein_coding MGP_CBAJ_T0069837.1 MGP_CBAJ_G0028969.1 mouse_genomes_project 5 16506937 16629195 - MGP_CBAJ_P0069837 Cd36 protein_coding protein_coding MGP_CBAJ_T0069838.1 MGP_CBAJ_G0028969.1 mouse_genomes_project 5 16506939 16588051 - MGP_CBAJ_P0069838 Cd36 protein_coding protein_coding MGP_CBAJ_T0069839.1 MGP_CBAJ_G0028969.1 mouse_genomes_project 5 16507056 16573630 - MGP_CBAJ_P0069839 Cd36 protein_coding protein_coding MGP_CBAJ_T0069840.1 MGP_CBAJ_G0028969.1 mouse_genomes_project 5 16542979 16629249 - MGP_CBAJ_P0069840 Cd36 protein_coding protein_coding MGP_CBAJ_T0071894.1 MGP_CBAJ_G0029322.1 mouse_genomes_project 5 82966507 83019123 + MGP_CBAJ_P0071894 Thegl protein_coding protein_coding MGP_CBAJ_T0071895.1 MGP_CBAJ_G0029322.1 mouse_genomes_project 5 82966507 83019130 + MGP_CBAJ_P0071895 Thegl protein_coding protein_coding MGP_CBAJ_T0071896.1 MGP_CBAJ_G0029322.1 mouse_genomes_project 5 82994713 83005157 + MGP_CBAJ_P0071896 Thegl protein_coding protein_coding MGP_CBAJ_T0010555.1 MGP_CBAJ_G0008693.1 mouse_genomes_project 5 53858981 53859068 - Gm44377 miRNA miRNA MGP_CBAJ_T0072836.1 MGP_CBAJ_G0029543.1 mouse_genomes_project 5 121415977 121418326 + MGP_CBAJ_P0072836 Chfr protein_coding protein_coding MGP_CBAJ_T0072837.1 MGP_CBAJ_G0029543.1 mouse_genomes_project 5 121415984 121460286 + MGP_CBAJ_P0072837 Chfr protein_coding protein_coding MGP_CBAJ_T0072838.1 MGP_CBAJ_G0029543.1 mouse_genomes_project 5 121415984 121451753 + MGP_CBAJ_P0072838 Chfr protein_coding nonsense_mediated_decay MGP_CBAJ_T0072839.1 MGP_CBAJ_G0029543.1 mouse_genomes_project 5 121415986 121459835 + MGP_CBAJ_P0072839 Chfr protein_coding nonsense_mediated_decay MGP_CBAJ_T0072840.1 MGP_CBAJ_G0029543.1 mouse_genomes_project 5 121415992 121459974 + MGP_CBAJ_P0072840 Chfr protein_coding protein_coding MGP_CBAJ_T0072841.1 MGP_CBAJ_G0029543.1 mouse_genomes_project 5 121415995 121456716 + Chfr protein_coding retained_intron MGP_CBAJ_T0072842.1 MGP_CBAJ_G0029543.1 mouse_genomes_project 5 121415995 121460287 + MGP_CBAJ_P0072842 Chfr protein_coding protein_coding MGP_CBAJ_T0072843.1 MGP_CBAJ_G0029543.1 mouse_genomes_project 5 121416013 121460284 + MGP_CBAJ_P0072843 Chfr protein_coding nonsense_mediated_decay MGP_CBAJ_T0072844.1 MGP_CBAJ_G0029543.1 mouse_genomes_project 5 121416042 121430768 + MGP_CBAJ_P0072844 Chfr protein_coding nonsense_mediated_decay MGP_CBAJ_T0072845.1 MGP_CBAJ_G0029543.1 mouse_genomes_project 5 121416060 121427965 + MGP_CBAJ_P0072845 Chfr protein_coding protein_coding MGP_CBAJ_T0072846.1 MGP_CBAJ_G0029543.1 mouse_genomes_project 5 121442778 121450900 + Chfr protein_coding retained_intron MGP_CBAJ_T0072847.1 MGP_CBAJ_G0029543.1 mouse_genomes_project 5 121451751 121459320 + Chfr protein_coding retained_intron MGP_CBAJ_T0014720.1 MGP_CBAJ_G0012832.1 mouse_genomes_project 5 34479580 34479830 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101139.1 MGP_CBAJ_G0039330.1 mouse_genomes_project 5 79951724 79952181 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0074795.1 MGP_CBAJ_G0029895.1 mouse_genomes_project 5 153447870 153460042 + MGP_CBAJ_P0074795 Actl6b protein_coding protein_coding MGP_CBAJ_T0074796.1 MGP_CBAJ_G0029895.1 mouse_genomes_project 5 153447891 153448700 + Actl6b protein_coding retained_intron MGP_CBAJ_T0074797.1 MGP_CBAJ_G0029895.1 mouse_genomes_project 5 153447891 153463464 + MGP_CBAJ_P0074797 Actl6b protein_coding nonsense_mediated_decay MGP_CBAJ_T0074798.1 MGP_CBAJ_G0029895.1 mouse_genomes_project 5 153447892 153462616 + MGP_CBAJ_P0074798 Actl6b protein_coding protein_coding MGP_CBAJ_T0074799.1 MGP_CBAJ_G0029895.1 mouse_genomes_project 5 153447908 153449386 + MGP_CBAJ_P0074799 Actl6b protein_coding protein_coding MGP_CBAJ_T0074800.1 MGP_CBAJ_G0029895.1 mouse_genomes_project 5 153447910 153451010 + Actl6b protein_coding retained_intron MGP_CBAJ_T0074801.1 MGP_CBAJ_G0029895.1 mouse_genomes_project 5 153447910 153466377 + MGP_CBAJ_P0074801 Actl6b protein_coding nonsense_mediated_decay MGP_CBAJ_T0074802.1 MGP_CBAJ_G0029895.1 mouse_genomes_project 5 153447988 153466206 + MGP_CBAJ_P0074802 Actl6b protein_coding protein_coding MGP_CBAJ_T0071603.1 MGP_CBAJ_G0029272.1 mouse_genomes_project 5 74613426 74629782 + MGP_CBAJ_P0071603 Guf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071604.1 MGP_CBAJ_G0029272.1 mouse_genomes_project 5 74613456 74623214 + Guf1 protein_coding retained_intron MGP_CBAJ_T0071605.1 MGP_CBAJ_G0029272.1 mouse_genomes_project 5 74613456 74623306 + MGP_CBAJ_P0071605 Guf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071606.1 MGP_CBAJ_G0029272.1 mouse_genomes_project 5 74613464 74631156 + MGP_CBAJ_P0071606 Guf1 protein_coding protein_coding MGP_CBAJ_T0071607.1 MGP_CBAJ_G0029272.1 mouse_genomes_project 5 74613491 74629783 + MGP_CBAJ_P0071607 Guf1 protein_coding protein_coding MGP_CBAJ_T0071608.1 MGP_CBAJ_G0029272.1 mouse_genomes_project 5 74613576 74624162 + MGP_CBAJ_P0071608 Guf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071609.1 MGP_CBAJ_G0029272.1 mouse_genomes_project 5 74613597 74629827 + MGP_CBAJ_P0071609 Guf1 protein_coding protein_coding MGP_CBAJ_T0071610.1 MGP_CBAJ_G0029272.1 mouse_genomes_project 5 74623228 74634025 + Guf1 protein_coding retained_intron MGP_CBAJ_T0071611.1 MGP_CBAJ_G0029272.1 mouse_genomes_project 5 74626590 74629535 + Guf1 protein_coding retained_intron MGP_CBAJ_T0004665.1 MGP_CBAJ_G0004029.1 mouse_genomes_project 5 109303912 109305126 + Gm17092 antisense antisense MGP_CBAJ_T0004792.1 MGP_CBAJ_G0004117.1 mouse_genomes_project 5 156692503 156703947 + Gm16122 antisense antisense MGP_CBAJ_T0001742.1 MGP_CBAJ_G0001660.1 mouse_genomes_project 5 128690363 128691826 - TEC TEC MGP_CBAJ_T0014724.1 MGP_CBAJ_G0012836.1 mouse_genomes_project 5 35179920 35180379 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017891.1 MGP_CBAJ_G0015341.1 mouse_genomes_project 5 61107353 61265896 - 4932441J04Rik processed_transcript antisense MGP_CBAJ_T0017892.1 MGP_CBAJ_G0015341.1 mouse_genomes_project 5 61264114 61268178 - 4932441J04Rik processed_transcript retained_intron MGP_CBAJ_T0001548.1 MGP_CBAJ_G0001468.1 mouse_genomes_project 5 54156254 54158074 - TEC TEC MGP_CBAJ_T0014762.1 MGP_CBAJ_G0012874.1 mouse_genomes_project 5 59430143 59430456 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001653.1 MGP_CBAJ_G0001571.1 mouse_genomes_project 5 79647843 79653051 - TEC TEC MGP_CBAJ_T0074097.1 MGP_CBAJ_G0029769.1 mouse_genomes_project 5 138865915 138894467 + MGP_CBAJ_P0074097 Zfp664 protein_coding protein_coding MGP_CBAJ_T0074098.1 MGP_CBAJ_G0029769.1 mouse_genomes_project 5 138865988 138919320 + Zfp664 protein_coding processed_transcript MGP_CBAJ_T0074099.1 MGP_CBAJ_G0029769.1 mouse_genomes_project 5 138866263 138891144 + Zfp664 protein_coding processed_transcript MGP_CBAJ_T0074100.1 MGP_CBAJ_G0029769.1 mouse_genomes_project 5 138877388 138879533 + Zfp664 protein_coding processed_transcript MGP_CBAJ_T0074101.1 MGP_CBAJ_G0029769.1 mouse_genomes_project 5 138879205 138891314 + Zfp664 protein_coding processed_transcript MGP_CBAJ_T0074102.1 MGP_CBAJ_G0029769.1 mouse_genomes_project 5 138890403 138894467 + Zfp664 protein_coding processed_transcript MGP_CBAJ_T0014710.1 MGP_CBAJ_G0012822.1 mouse_genomes_project 5 31803985 31804432 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001863.1 MGP_CBAJ_G0001779.1 mouse_genomes_project 5 161380076 161381871 + TEC TEC MGP_CBAJ_T0001425.1 MGP_CBAJ_G0001349.1 mouse_genomes_project 5 14249055 14250236 + TEC TEC MGP_CBAJ_T0074103.1 MGP_CBAJ_G0029770.1 mouse_genomes_project 5 139040093 139049382 + MGP_CBAJ_P0074103 Fam101a protein_coding protein_coding MGP_CBAJ_T0074104.1 MGP_CBAJ_G0029770.1 mouse_genomes_project 5 139040347 139049381 + MGP_CBAJ_P0074104 Fam101a protein_coding protein_coding MGP_CBAJ_T0074105.1 MGP_CBAJ_G0029770.1 mouse_genomes_project 5 139046949 139048329 + Fam101a protein_coding processed_transcript MGP_CBAJ_T0099359.1 MGP_CBAJ_G0037614.1 mouse_genomes_project 5 77608357 77608455 - Gm25768 snRNA snRNA MGP_CBAJ_T0014791.1 MGP_CBAJ_G0012903.1 mouse_genomes_project 5 68688605 68689104 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0071092.1 MGP_CBAJ_G0029189.1 mouse_genomes_project 5 44743466 44745291 - MGP_CBAJ_P0071092 protein_coding protein_coding MGP_CBAJ_T0001780.1 MGP_CBAJ_G0001698.1 mouse_genomes_project 5 137238403 137239270 + TEC TEC MGP_CBAJ_T0070754.1 MGP_CBAJ_G0029132.1 mouse_genomes_project 5 35392740 35413307 - MGP_CBAJ_P0070754 Tnip2 protein_coding protein_coding MGP_CBAJ_T0070755.1 MGP_CBAJ_G0029132.1 mouse_genomes_project 5 35392740 35413279 - MGP_CBAJ_P0070755 Tnip2 protein_coding protein_coding MGP_CBAJ_T0070756.1 MGP_CBAJ_G0029132.1 mouse_genomes_project 5 35392783 35413254 - MGP_CBAJ_P0070756 Tnip2 protein_coding protein_coding MGP_CBAJ_T0070757.1 MGP_CBAJ_G0029132.1 mouse_genomes_project 5 35396258 35398272 - Tnip2 protein_coding retained_intron MGP_CBAJ_T0070758.1 MGP_CBAJ_G0029132.1 mouse_genomes_project 5 35397825 35413165 - Tnip2 protein_coding retained_intron MGP_CBAJ_T0070759.1 MGP_CBAJ_G0029132.1 mouse_genomes_project 5 35399939 35412976 - Tnip2 protein_coding retained_intron MGP_CBAJ_T0074214.1 MGP_CBAJ_G0029791.1 mouse_genomes_project 5 144286082 144301589 - MGP_CBAJ_P0074214 Zfp11 protein_coding protein_coding MGP_CBAJ_T0075254.1 MGP_CBAJ_G0029992.1 mouse_genomes_project 5 160329755 160345228 + MGP_CBAJ_P0075254 Zfp12 protein_coding protein_coding MGP_CBAJ_T0075255.1 MGP_CBAJ_G0029992.1 mouse_genomes_project 5 160329766 160346086 + MGP_CBAJ_P0075255 Zfp12 protein_coding protein_coding MGP_CBAJ_T0075256.1 MGP_CBAJ_G0029992.1 mouse_genomes_project 5 160329839 160345236 + MGP_CBAJ_P0075256 Zfp12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075257.1 MGP_CBAJ_G0029992.1 mouse_genomes_project 5 160330372 160337290 + MGP_CBAJ_P0075257 Zfp12 protein_coding protein_coding MGP_CBAJ_T0075258.1 MGP_CBAJ_G0029992.1 mouse_genomes_project 5 160337248 160341908 + Zfp12 protein_coding processed_transcript MGP_CBAJ_T0071320.1 MGP_CBAJ_G0029225.1 mouse_genomes_project 5 56797157 56839325 + MGP_CBAJ_P0071320 Tbc1d19 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071321.1 MGP_CBAJ_G0029225.1 mouse_genomes_project 5 56797178 56904789 + MGP_CBAJ_P0071321 Tbc1d19 protein_coding protein_coding MGP_CBAJ_T0071322.1 MGP_CBAJ_G0029225.1 mouse_genomes_project 5 56797199 56823933 + Tbc1d19 protein_coding processed_transcript MGP_CBAJ_T0071323.1 MGP_CBAJ_G0029225.1 mouse_genomes_project 5 56797200 56818239 + Tbc1d19 protein_coding retained_intron MGP_CBAJ_T0071324.1 MGP_CBAJ_G0029225.1 mouse_genomes_project 5 56797205 56904787 + MGP_CBAJ_P0071324 Tbc1d19 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071325.1 MGP_CBAJ_G0029225.1 mouse_genomes_project 5 56797230 56825472 + MGP_CBAJ_P0071325 Tbc1d19 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071326.1 MGP_CBAJ_G0029225.1 mouse_genomes_project 5 56820069 56825414 + Tbc1d19 protein_coding retained_intron MGP_CBAJ_T0071327.1 MGP_CBAJ_G0029225.1 mouse_genomes_project 5 56823922 56844420 + Tbc1d19 protein_coding processed_transcript MGP_CBAJ_T0071328.1 MGP_CBAJ_G0029225.1 mouse_genomes_project 5 56891875 56904562 + Tbc1d19 protein_coding processed_transcript MGP_CBAJ_T0001495.1 MGP_CBAJ_G0001416.1 mouse_genomes_project 5 46108597 46109412 + TEC TEC MGP_CBAJ_T0001719.1 MGP_CBAJ_G0001637.1 mouse_genomes_project 5 122539915 122542293 + TEC TEC MGP_CBAJ_T0014742.1 MGP_CBAJ_G0012854.1 mouse_genomes_project 5 46315668 46316305 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0075197.1 MGP_CBAJ_G0029981.1 mouse_genomes_project 5 159483752 159546264 - MGP_CBAJ_P0075197 Mmd2 protein_coding protein_coding MGP_CBAJ_T0075198.1 MGP_CBAJ_G0029981.1 mouse_genomes_project 5 159509593 159511469 - Mmd2 protein_coding retained_intron MGP_CBAJ_T0075199.1 MGP_CBAJ_G0029981.1 mouse_genomes_project 5 159510895 159546264 - Mmd2 protein_coding processed_transcript MGP_CBAJ_T0099331.1 MGP_CBAJ_G0037586.1 mouse_genomes_project 5 18467403 18467506 - Gm25335 snRNA snRNA MGP_CBAJ_T0101327.1 MGP_CBAJ_G0039423.1 mouse_genomes_project 5 33358331 33360657 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0001519.1 MGP_CBAJ_G0001440.1 mouse_genomes_project 5 50658675 50660061 + TEC TEC MGP_CBAJ_T0073262.1 MGP_CBAJ_G0029625.1 mouse_genomes_project 5 127356099 127387905 - MGP_CBAJ_P0073262 Rnf10 protein_coding protein_coding MGP_CBAJ_T0073263.1 MGP_CBAJ_G0029625.1 mouse_genomes_project 5 127356457 127387899 - MGP_CBAJ_P0073263 Rnf10 protein_coding protein_coding MGP_CBAJ_T0073264.1 MGP_CBAJ_G0029625.1 mouse_genomes_project 5 127356457 127387902 - MGP_CBAJ_P0073264 Rnf10 protein_coding protein_coding MGP_CBAJ_T0073265.1 MGP_CBAJ_G0029625.1 mouse_genomes_project 5 127356462 127357403 - Rnf10 protein_coding retained_intron MGP_CBAJ_T0073266.1 MGP_CBAJ_G0029625.1 mouse_genomes_project 5 127356466 127387317 - MGP_CBAJ_P0073266 Rnf10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073267.1 MGP_CBAJ_G0029625.1 mouse_genomes_project 5 127358405 127360789 - Rnf10 protein_coding retained_intron MGP_CBAJ_T0073268.1 MGP_CBAJ_G0029625.1 mouse_genomes_project 5 127363408 127364203 - Rnf10 protein_coding processed_transcript MGP_CBAJ_T0073269.1 MGP_CBAJ_G0029625.1 mouse_genomes_project 5 127366011 127367610 - Rnf10 protein_coding retained_intron MGP_CBAJ_T0073270.1 MGP_CBAJ_G0029625.1 mouse_genomes_project 5 127366032 127372209 - Rnf10 protein_coding processed_transcript MGP_CBAJ_T0073271.1 MGP_CBAJ_G0029625.1 mouse_genomes_project 5 127368203 127369875 - Rnf10 protein_coding retained_intron MGP_CBAJ_T0073272.1 MGP_CBAJ_G0029625.1 mouse_genomes_project 5 127385629 127387902 - Rnf10 protein_coding retained_intron MGP_CBAJ_T0073030.1 MGP_CBAJ_G0029580.1 mouse_genomes_project 5 124946466 125039322 - MGP_CBAJ_P0073030 Sgsm1 protein_coding protein_coding MGP_CBAJ_T0073031.1 MGP_CBAJ_G0029580.1 mouse_genomes_project 5 124946475 125002271 - MGP_CBAJ_P0073031 Sgsm1 protein_coding protein_coding MGP_CBAJ_T0073032.1 MGP_CBAJ_G0029580.1 mouse_genomes_project 5 124962958 125002271 - Sgsm1 protein_coding processed_transcript MGP_CBAJ_T0073033.1 MGP_CBAJ_G0029580.1 mouse_genomes_project 5 124963601 125039313 - Sgsm1 protein_coding processed_transcript MGP_CBAJ_T0073034.1 MGP_CBAJ_G0029580.1 mouse_genomes_project 5 124976500 125039275 - MGP_CBAJ_P0073034 Sgsm1 protein_coding protein_coding MGP_CBAJ_T0073035.1 MGP_CBAJ_G0029580.1 mouse_genomes_project 5 124977113 125039233 - MGP_CBAJ_P0073035 Sgsm1 protein_coding protein_coding MGP_CBAJ_T0073036.1 MGP_CBAJ_G0029580.1 mouse_genomes_project 5 124992059 125002257 - MGP_CBAJ_P0073036 Sgsm1 protein_coding protein_coding MGP_CBAJ_T0073037.1 MGP_CBAJ_G0029580.1 mouse_genomes_project 5 124993991 124997434 - Sgsm1 protein_coding retained_intron MGP_CBAJ_T0073038.1 MGP_CBAJ_G0029580.1 mouse_genomes_project 5 124997704 125004564 - Sgsm1 protein_coding retained_intron MGP_CBAJ_T0073039.1 MGP_CBAJ_G0029580.1 mouse_genomes_project 5 125010968 125039256 - Sgsm1 protein_coding retained_intron MGP_CBAJ_T0008223.1 MGP_CBAJ_G0006676.1 mouse_genomes_project 5 129219106 129222490 + Gm29926 lincRNA lincRNA MGP_CBAJ_T0008373.1 MGP_CBAJ_G0006780.1 mouse_genomes_project 5 169063355 169063621 - Gm43690 lincRNA lincRNA MGP_CBAJ_T0004689.1 MGP_CBAJ_G0004045.1 mouse_genomes_project 5 121559266 121571898 + Gm15788 antisense antisense MGP_CBAJ_T0073123.1 MGP_CBAJ_G0029597.1 mouse_genomes_project 5 126121415 126141063 - MGP_CBAJ_P0073123 Foxn4 protein_coding protein_coding MGP_CBAJ_T0073124.1 MGP_CBAJ_G0029597.1 mouse_genomes_project 5 126122836 126130396 - MGP_CBAJ_P0073124 Foxn4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073125.1 MGP_CBAJ_G0029597.1 mouse_genomes_project 5 126127614 126140958 - MGP_CBAJ_P0073125 Foxn4 protein_coding protein_coding MGP_CBAJ_T0073126.1 MGP_CBAJ_G0029597.1 mouse_genomes_project 5 126129981 126141005 - Foxn4 protein_coding retained_intron MGP_CBAJ_T0017914.1 MGP_CBAJ_G0015350.1 mouse_genomes_project 5 118115232 118117171 + A430072P03Rik processed_transcript processed_transcript MGP_CBAJ_T0017915.1 MGP_CBAJ_G0015350.1 mouse_genomes_project 5 118116464 118118868 + A430072P03Rik processed_transcript processed_transcript MGP_CBAJ_T0099329.1 MGP_CBAJ_G0037584.1 mouse_genomes_project 5 6862689 6862856 + Gm24666 snRNA snRNA MGP_CBAJ_T0070146.1 MGP_CBAJ_G0029031.1 mouse_genomes_project 5 27444770 27447145 - MGP_CBAJ_P0070146 protein_coding protein_coding MGP_CBAJ_T0008116.1 MGP_CBAJ_G0006608.1 mouse_genomes_project 5 108749017 108751666 + Gm43253 lincRNA lincRNA MGP_CBAJ_T0010543.1 MGP_CBAJ_G0008681.1 mouse_genomes_project 5 24225992 24226090 + Mir671 miRNA miRNA MGP_CBAJ_T0099361.1 MGP_CBAJ_G0037616.1 mouse_genomes_project 5 81119573 81119678 - Gm22084 snRNA snRNA MGP_CBAJ_T0075437.1 MGP_CBAJ_G0030030.1 mouse_genomes_project 5 162566694 162590310 + MGP_CBAJ_P0075437 Zkscan5 protein_coding protein_coding MGP_CBAJ_T0075438.1 MGP_CBAJ_G0030030.1 mouse_genomes_project 5 162566800 162590310 + MGP_CBAJ_P0075438 Zkscan5 protein_coding protein_coding MGP_CBAJ_T0075439.1 MGP_CBAJ_G0030030.1 mouse_genomes_project 5 162567253 162587144 + MGP_CBAJ_P0075439 Zkscan5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075440.1 MGP_CBAJ_G0030030.1 mouse_genomes_project 5 162574002 162587008 + MGP_CBAJ_P0075440 Zkscan5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075441.1 MGP_CBAJ_G0030030.1 mouse_genomes_project 5 162574032 162587062 + MGP_CBAJ_P0075441 Zkscan5 protein_coding protein_coding MGP_CBAJ_T0075442.1 MGP_CBAJ_G0030030.1 mouse_genomes_project 5 162574948 162586878 + Zkscan5 protein_coding processed_transcript MGP_CBAJ_T0074743.1 MGP_CBAJ_G0029886.1 mouse_genomes_project 5 153130114 153142110 - MGP_CBAJ_P0074743 Srrt protein_coding protein_coding MGP_CBAJ_T0074744.1 MGP_CBAJ_G0029886.1 mouse_genomes_project 5 153130121 153142102 - MGP_CBAJ_P0074744 Srrt protein_coding protein_coding MGP_CBAJ_T0074745.1 MGP_CBAJ_G0029886.1 mouse_genomes_project 5 153130125 153142102 - MGP_CBAJ_P0074745 Srrt protein_coding protein_coding MGP_CBAJ_T0074746.1 MGP_CBAJ_G0029886.1 mouse_genomes_project 5 153130127 153141846 - MGP_CBAJ_P0074746 Srrt protein_coding nonsense_mediated_decay MGP_CBAJ_T0074747.1 MGP_CBAJ_G0029886.1 mouse_genomes_project 5 153130135 153134056 - MGP_CBAJ_P0074747 Srrt protein_coding protein_coding MGP_CBAJ_T0074748.1 MGP_CBAJ_G0029886.1 mouse_genomes_project 5 153130397 153131836 - MGP_CBAJ_P0074748 Srrt protein_coding protein_coding MGP_CBAJ_T0074749.1 MGP_CBAJ_G0029886.1 mouse_genomes_project 5 153130428 153131345 - Srrt protein_coding retained_intron MGP_CBAJ_T0074750.1 MGP_CBAJ_G0029886.1 mouse_genomes_project 5 153130646 153131628 - Srrt protein_coding retained_intron MGP_CBAJ_T0074751.1 MGP_CBAJ_G0029886.1 mouse_genomes_project 5 153130689 153131264 - Srrt protein_coding retained_intron MGP_CBAJ_T0074752.1 MGP_CBAJ_G0029886.1 mouse_genomes_project 5 153130877 153131978 - Srrt protein_coding retained_intron MGP_CBAJ_T0074753.1 MGP_CBAJ_G0029886.1 mouse_genomes_project 5 153132034 153132958 - Srrt protein_coding retained_intron MGP_CBAJ_T0074754.1 MGP_CBAJ_G0029886.1 mouse_genomes_project 5 153132242 153134420 - MGP_CBAJ_P0074754 Srrt protein_coding nonsense_mediated_decay MGP_CBAJ_T0074755.1 MGP_CBAJ_G0029886.1 mouse_genomes_project 5 153132242 153134729 - MGP_CBAJ_P0074755 Srrt protein_coding nonsense_mediated_decay MGP_CBAJ_T0074756.1 MGP_CBAJ_G0029886.1 mouse_genomes_project 5 153132669 153134297 - Srrt protein_coding retained_intron MGP_CBAJ_T0074757.1 MGP_CBAJ_G0029886.1 mouse_genomes_project 5 153133996 153141898 - Srrt protein_coding retained_intron MGP_CBAJ_T0074758.1 MGP_CBAJ_G0029886.1 mouse_genomes_project 5 153134283 153135142 - Srrt protein_coding retained_intron MGP_CBAJ_T0074759.1 MGP_CBAJ_G0029886.1 mouse_genomes_project 5 153137064 153142076 - MGP_CBAJ_P0074759 Srrt protein_coding nonsense_mediated_decay MGP_CBAJ_T0073552.1 MGP_CBAJ_G0029685.1 mouse_genomes_project 5 134393407 134476889 - MGP_CBAJ_P0073552 Ptpn11 protein_coding protein_coding MGP_CBAJ_T0073553.1 MGP_CBAJ_G0029685.1 mouse_genomes_project 5 134393409 134476859 - Ptpn11 protein_coding retained_intron MGP_CBAJ_T0073554.1 MGP_CBAJ_G0029685.1 mouse_genomes_project 5 134393523 134476821 - MGP_CBAJ_P0073554 Ptpn11 protein_coding protein_coding MGP_CBAJ_T0073555.1 MGP_CBAJ_G0029685.1 mouse_genomes_project 5 134396714 134412730 - Ptpn11 protein_coding processed_transcript MGP_CBAJ_T0074520.1 MGP_CBAJ_G0029843.1 mouse_genomes_project 5 150723074 150787411 - MGP_CBAJ_P0074520 Fkbp6 protein_coding protein_coding MGP_CBAJ_T0074521.1 MGP_CBAJ_G0029843.1 mouse_genomes_project 5 150723074 150787381 - MGP_CBAJ_P0074521 Fkbp6 protein_coding protein_coding MGP_CBAJ_T0074522.1 MGP_CBAJ_G0029843.1 mouse_genomes_project 5 150773898 150787242 - MGP_CBAJ_P0074522 Fkbp6 protein_coding protein_coding MGP_CBAJ_T0074523.1 MGP_CBAJ_G0029843.1 mouse_genomes_project 5 150773898 150787410 - MGP_CBAJ_P0074523 Fkbp6 protein_coding protein_coding MGP_CBAJ_T0074266.1 MGP_CBAJ_G0029802.1 mouse_genomes_project 5 144691589 144706364 - MGP_CBAJ_P0074266 Asl protein_coding protein_coding MGP_CBAJ_T0074267.1 MGP_CBAJ_G0029802.1 mouse_genomes_project 5 144691825 144695054 - MGP_CBAJ_P0074267 Asl protein_coding protein_coding MGP_CBAJ_T0074268.1 MGP_CBAJ_G0029802.1 mouse_genomes_project 5 144691826 144714410 - MGP_CBAJ_P0074268 Asl protein_coding protein_coding MGP_CBAJ_T0074269.1 MGP_CBAJ_G0029802.1 mouse_genomes_project 5 144691835 144710191 - MGP_CBAJ_P0074269 Asl protein_coding protein_coding MGP_CBAJ_T0074270.1 MGP_CBAJ_G0029802.1 mouse_genomes_project 5 144693778 144706283 - MGP_CBAJ_P0074270 Asl protein_coding protein_coding MGP_CBAJ_T0074271.1 MGP_CBAJ_G0029802.1 mouse_genomes_project 5 144697085 144706356 - Asl protein_coding processed_transcript MGP_CBAJ_T0074272.1 MGP_CBAJ_G0029802.1 mouse_genomes_project 5 144701701 144706300 - MGP_CBAJ_P0074272 Asl protein_coding protein_coding MGP_CBAJ_T0074273.1 MGP_CBAJ_G0029802.1 mouse_genomes_project 5 144704278 144706328 - Asl protein_coding retained_intron MGP_CBAJ_T0014711.1 MGP_CBAJ_G0012823.1 mouse_genomes_project 5 32731324 32731907 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0069533.1 MGP_CBAJ_G0028919.1 mouse_genomes_project 5 238188 241157 + MGP_CBAJ_P0069533 Cdk6 protein_coding protein_coding MGP_CBAJ_T0069534.1 MGP_CBAJ_G0028919.1 mouse_genomes_project 5 240435 241141 + MGP_CBAJ_P0069534 Cdk6 protein_coding protein_coding MGP_CBAJ_T0069535.1 MGP_CBAJ_G0028919.1 mouse_genomes_project 5 240619 291170 + MGP_CBAJ_P0069535 Cdk6 protein_coding protein_coding MGP_CBAJ_T0069536.1 MGP_CBAJ_G0028919.1 mouse_genomes_project 5 241015 483768 + MGP_CBAJ_P0069536 Cdk6 protein_coding protein_coding MGP_CBAJ_T0069537.1 MGP_CBAJ_G0028919.1 mouse_genomes_project 5 241070 482334 + MGP_CBAJ_P0069537 Cdk6 protein_coding unknown_likely_coding MGP_CBAJ_T0069538.1 MGP_CBAJ_G0028919.1 mouse_genomes_project 5 426243 428475 + Cdk6 protein_coding retained_intron MGP_CBAJ_T0004716.1 MGP_CBAJ_G0004065.1 mouse_genomes_project 5 129563974 129567462 + 9530046B11Rik antisense antisense MGP_CBAJ_T0072536.1 MGP_CBAJ_G0029474.1 mouse_genomes_project 5 113756202 113779619 - MGP_CBAJ_P0072536 Hsd17b13 protein_coding protein_coding MGP_CBAJ_T0072537.1 MGP_CBAJ_G0029474.1 mouse_genomes_project 5 113764242 113779665 - MGP_CBAJ_P0072537 Hsd17b13 protein_coding protein_coding MGP_CBAJ_T0072538.1 MGP_CBAJ_G0029474.1 mouse_genomes_project 5 113764242 113779581 - MGP_CBAJ_P0072538 Hsd17b13 protein_coding protein_coding MGP_CBAJ_T0014993.1 MGP_CBAJ_G0013105.1 mouse_genomes_project 5 166720598 166720776 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010547.1 MGP_CBAJ_G0008685.1 mouse_genomes_project 5 32166864 32166974 - Mir3473e miRNA miRNA MGP_CBAJ_T0001414.1 MGP_CBAJ_G0001338.1 mouse_genomes_project 5 11774439 11778474 + TEC TEC MGP_CBAJ_T0069999.1 MGP_CBAJ_G0029001.1 mouse_genomes_project 5 23901051 23935762 - MGP_CBAJ_P0069999 Kcnh2 protein_coding protein_coding MGP_CBAJ_T0070000.1 MGP_CBAJ_G0029001.1 mouse_genomes_project 5 23901051 23911046 - MGP_CBAJ_P0070000 Kcnh2 protein_coding protein_coding MGP_CBAJ_T0070001.1 MGP_CBAJ_G0029001.1 mouse_genomes_project 5 23901545 23903717 - Kcnh2 protein_coding processed_transcript MGP_CBAJ_T0070002.1 MGP_CBAJ_G0029001.1 mouse_genomes_project 5 23905952 23907252 - Kcnh2 protein_coding processed_transcript MGP_CBAJ_T0070003.1 MGP_CBAJ_G0029001.1 mouse_genomes_project 5 23906910 23907982 - Kcnh2 protein_coding processed_transcript MGP_CBAJ_T0073821.1 MGP_CBAJ_G0029724.1 mouse_genomes_project 5 136733116 136754983 + MGP_CBAJ_P0073821 Orai1 protein_coding protein_coding MGP_CBAJ_T0073822.1 MGP_CBAJ_G0029724.1 mouse_genomes_project 5 136733116 136755283 + MGP_CBAJ_P0073822 Orai1 protein_coding protein_coding MGP_CBAJ_T0073823.1 MGP_CBAJ_G0029724.1 mouse_genomes_project 5 136733380 136754317 + Orai1 protein_coding processed_transcript MGP_CBAJ_T0072895.1 MGP_CBAJ_G0029553.1 mouse_genomes_project 5 121997556 122002549 - MGP_CBAJ_P0072895 Noc4l protein_coding protein_coding MGP_CBAJ_T0072896.1 MGP_CBAJ_G0029553.1 mouse_genomes_project 5 121997985 121999156 - Noc4l protein_coding retained_intron MGP_CBAJ_T0072897.1 MGP_CBAJ_G0029553.1 mouse_genomes_project 5 122000208 122002388 - Noc4l protein_coding retained_intron MGP_CBAJ_T0072898.1 MGP_CBAJ_G0029553.1 mouse_genomes_project 5 122000382 122002480 - Noc4l protein_coding retained_intron MGP_CBAJ_T0072899.1 MGP_CBAJ_G0029553.1 mouse_genomes_project 5 122000502 122002498 - Noc4l protein_coding retained_intron MGP_CBAJ_T0072900.1 MGP_CBAJ_G0029553.1 mouse_genomes_project 5 122002133 122002512 - Noc4l protein_coding retained_intron MGP_CBAJ_T0010588.1 MGP_CBAJ_G0008726.1 mouse_genomes_project 5 135292506 135292571 - Mir7031 miRNA miRNA MGP_CBAJ_T0074037.1 MGP_CBAJ_G0029758.1 mouse_genomes_project 5 138465568 138489178 + MGP_CBAJ_P0074037 Kmt5a protein_coding protein_coding MGP_CBAJ_T0074038.1 MGP_CBAJ_G0029758.1 mouse_genomes_project 5 138465605 138488381 + MGP_CBAJ_P0074038 Kmt5a protein_coding nonsense_mediated_decay MGP_CBAJ_T0074039.1 MGP_CBAJ_G0029758.1 mouse_genomes_project 5 138465623 138466894 + Kmt5a protein_coding retained_intron MGP_CBAJ_T0074040.1 MGP_CBAJ_G0029758.1 mouse_genomes_project 5 138471141 138487830 + MGP_CBAJ_P0074040 Kmt5a protein_coding protein_coding MGP_CBAJ_T0074041.1 MGP_CBAJ_G0029758.1 mouse_genomes_project 5 138471153 138488413 + Kmt5a protein_coding processed_transcript MGP_CBAJ_T0074042.1 MGP_CBAJ_G0029758.1 mouse_genomes_project 5 138471356 138486384 + MGP_CBAJ_P0074042 Kmt5a protein_coding protein_coding MGP_CBAJ_T0074043.1 MGP_CBAJ_G0029758.1 mouse_genomes_project 5 138471432 138477017 + Kmt5a protein_coding retained_intron MGP_CBAJ_T0074044.1 MGP_CBAJ_G0029758.1 mouse_genomes_project 5 138472352 138482803 + Kmt5a protein_coding processed_transcript MGP_CBAJ_T0074045.1 MGP_CBAJ_G0029758.1 mouse_genomes_project 5 138472610 138486317 + Kmt5a protein_coding processed_transcript MGP_CBAJ_T0074046.1 MGP_CBAJ_G0029758.1 mouse_genomes_project 5 138472653 138476498 + Kmt5a protein_coding processed_transcript MGP_CBAJ_T0074047.1 MGP_CBAJ_G0029758.1 mouse_genomes_project 5 138475884 138485478 + Kmt5a protein_coding processed_transcript MGP_CBAJ_T0074048.1 MGP_CBAJ_G0029758.1 mouse_genomes_project 5 138476097 138485629 + Kmt5a protein_coding retained_intron MGP_CBAJ_T0074049.1 MGP_CBAJ_G0029758.1 mouse_genomes_project 5 138476884 138486523 + Kmt5a protein_coding retained_intron MGP_CBAJ_T0001412.1 MGP_CBAJ_G0001336.1 mouse_genomes_project 5 11700309 11704234 + TEC TEC MGP_CBAJ_T0075528.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165327246 165476844 + MGP_CBAJ_P0075528 protein_coding protein_coding MGP_CBAJ_T0075529.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165327538 165476838 + MGP_CBAJ_P0075529 protein_coding protein_coding MGP_CBAJ_T0075530.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165327981 165355328 + protein_coding retained_intron MGP_CBAJ_T0075531.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165327981 165353723 + protein_coding processed_transcript MGP_CBAJ_T0075532.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165327981 165443257 + MGP_CBAJ_P0075532 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075533.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165350712 165394480 + protein_coding retained_intron MGP_CBAJ_T0075534.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165350716 165474301 + MGP_CBAJ_P0075534 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075535.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165350716 165474301 + MGP_CBAJ_P0075535 protein_coding protein_coding MGP_CBAJ_T0075536.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165350796 165442881 + MGP_CBAJ_P0075536 protein_coding protein_coding MGP_CBAJ_T0075537.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165351772 165354101 + protein_coding retained_intron MGP_CBAJ_T0075538.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165353249 165398551 + protein_coding processed_transcript MGP_CBAJ_T0075539.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165353280 165476838 + MGP_CBAJ_P0075539 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075540.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165430543 165434291 + protein_coding retained_intron MGP_CBAJ_T0075541.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165432327 165442911 + protein_coding retained_intron MGP_CBAJ_T0075542.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165432728 165476838 + MGP_CBAJ_P0075542 protein_coding protein_coding MGP_CBAJ_T0075543.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165442323 165443238 + protein_coding retained_intron MGP_CBAJ_T0075544.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165458198 165476830 + protein_coding retained_intron MGP_CBAJ_T0075545.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165458403 165460207 + protein_coding retained_intron MGP_CBAJ_T0075546.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165458479 165461815 + protein_coding processed_transcript MGP_CBAJ_T0075547.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165459862 165461761 + protein_coding retained_intron MGP_CBAJ_T0075548.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165464681 165471483 + protein_coding retained_intron MGP_CBAJ_T0075549.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165465573 165474036 + protein_coding processed_transcript MGP_CBAJ_T0075550.1 MGP_CBAJ_G0030064.1 mouse_genomes_project 5 165467634 165476835 + MGP_CBAJ_P0075550 protein_coding protein_coding MGP_CBAJ_T0014680.1 MGP_CBAJ_G0012792.1 mouse_genomes_project 5 22299827 22300416 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100600.1 MGP_CBAJ_G0038855.1 mouse_genomes_project 5 20245026 20245145 - Gm22490 snoRNA snoRNA MGP_CBAJ_T0072964.1 MGP_CBAJ_G0029566.1 mouse_genomes_project 5 123814621 123859189 + MGP_CBAJ_P0072964 Tpst2 protein_coding protein_coding MGP_CBAJ_T0072965.1 MGP_CBAJ_G0029566.1 mouse_genomes_project 5 123814634 123852960 + Tpst2 protein_coding retained_intron MGP_CBAJ_T0072966.1 MGP_CBAJ_G0029566.1 mouse_genomes_project 5 123814637 123859183 + MGP_CBAJ_P0072966 Tpst2 protein_coding protein_coding MGP_CBAJ_T0072967.1 MGP_CBAJ_G0029566.1 mouse_genomes_project 5 123829614 123851660 + MGP_CBAJ_P0072967 Tpst2 protein_coding protein_coding MGP_CBAJ_T0072968.1 MGP_CBAJ_G0029566.1 mouse_genomes_project 5 123847820 123858785 + MGP_CBAJ_P0072968 Tpst2 protein_coding protein_coding MGP_CBAJ_T0072969.1 MGP_CBAJ_G0029566.1 mouse_genomes_project 5 123852214 123853740 + MGP_CBAJ_P0072969 Tpst2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072970.1 MGP_CBAJ_G0029566.1 mouse_genomes_project 5 123856723 123858792 + Tpst2 protein_coding retained_intron MGP_CBAJ_T0070194.1 MGP_CBAJ_G0029043.1 mouse_genomes_project 5 29704228 29817029 + MGP_CBAJ_P0070194 Ube3c protein_coding protein_coding MGP_CBAJ_T0070195.1 MGP_CBAJ_G0029043.1 mouse_genomes_project 5 29704432 29773035 + MGP_CBAJ_P0070195 Ube3c protein_coding protein_coding MGP_CBAJ_T0070196.1 MGP_CBAJ_G0029043.1 mouse_genomes_project 5 29704472 29736466 + Ube3c protein_coding retained_intron MGP_CBAJ_T0070197.1 MGP_CBAJ_G0029043.1 mouse_genomes_project 5 29727170 29737003 + Ube3c protein_coding processed_transcript MGP_CBAJ_T0070198.1 MGP_CBAJ_G0029043.1 mouse_genomes_project 5 29771463 29773035 + Ube3c protein_coding retained_intron MGP_CBAJ_T0071153.1 MGP_CBAJ_G0029199.1 mouse_genomes_project 5 46394125 46772338 - MGP_CBAJ_P0071153 Ldb2 protein_coding protein_coding MGP_CBAJ_T0071154.1 MGP_CBAJ_G0029199.1 mouse_genomes_project 5 46394125 46772318 - MGP_CBAJ_P0071154 Ldb2 protein_coding protein_coding MGP_CBAJ_T0071155.1 MGP_CBAJ_G0029199.1 mouse_genomes_project 5 46394125 46772379 - MGP_CBAJ_P0071155 Ldb2 protein_coding protein_coding MGP_CBAJ_T0071156.1 MGP_CBAJ_G0029199.1 mouse_genomes_project 5 46394133 46772301 - MGP_CBAJ_P0071156 Ldb2 protein_coding protein_coding MGP_CBAJ_T0071157.1 MGP_CBAJ_G0029199.1 mouse_genomes_project 5 46401334 46533576 - Ldb2 protein_coding processed_transcript MGP_CBAJ_T0071158.1 MGP_CBAJ_G0029199.1 mouse_genomes_project 5 46462037 46470511 - Ldb2 protein_coding processed_transcript MGP_CBAJ_T0071159.1 MGP_CBAJ_G0029199.1 mouse_genomes_project 5 46477014 46772351 - Ldb2 protein_coding retained_intron MGP_CBAJ_T0071264.1 MGP_CBAJ_G0029216.1 mouse_genomes_project 5 55408097 55439966 - MGP_CBAJ_P0071264 Sepsecs protein_coding nonsense_mediated_decay MGP_CBAJ_T0071265.1 MGP_CBAJ_G0029216.1 mouse_genomes_project 5 55408097 55439966 - MGP_CBAJ_P0071265 Sepsecs protein_coding protein_coding MGP_CBAJ_T0071266.1 MGP_CBAJ_G0029216.1 mouse_genomes_project 5 55409186 55435743 - MGP_CBAJ_P0071266 Sepsecs protein_coding nonsense_mediated_decay MGP_CBAJ_T0071267.1 MGP_CBAJ_G0029216.1 mouse_genomes_project 5 55414647 55416522 - Sepsecs protein_coding retained_intron MGP_CBAJ_T0071268.1 MGP_CBAJ_G0029216.1 mouse_genomes_project 5 55426096 55439873 - MGP_CBAJ_P0071268 Sepsecs protein_coding nonsense_mediated_decay MGP_CBAJ_T0004701.1 MGP_CBAJ_G0004054.1 mouse_genomes_project 5 126675510 126676077 - Gm42789 antisense antisense MGP_CBAJ_T0008343.1 MGP_CBAJ_G0006760.1 mouse_genomes_project 5 166884588 166885886 + 2210417A02Rik lincRNA lincRNA MGP_CBAJ_T0001699.1 MGP_CBAJ_G0001617.1 mouse_genomes_project 5 112689739 112692219 - TEC TEC MGP_CBAJ_T0071091.1 MGP_CBAJ_G0029188.1 mouse_genomes_project 5 44743380 44756157 - MGP_CBAJ_P0071091 protein_coding protein_coding MGP_CBAJ_T0073801.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136564244 136702219 - MGP_CBAJ_P0073801 Kdm2b protein_coding protein_coding MGP_CBAJ_T0073802.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136564247 136598247 - MGP_CBAJ_P0073802 Kdm2b protein_coding protein_coding MGP_CBAJ_T0073803.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136564258 136702426 - MGP_CBAJ_P0073803 Kdm2b protein_coding protein_coding MGP_CBAJ_T0073804.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136564260 136701653 - MGP_CBAJ_P0073804 Kdm2b protein_coding protein_coding MGP_CBAJ_T0073805.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136564895 136702914 - MGP_CBAJ_P0073805 Kdm2b protein_coding nonsense_mediated_decay MGP_CBAJ_T0073806.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136565300 136701601 - MGP_CBAJ_P0073806 Kdm2b protein_coding protein_coding MGP_CBAJ_T0073807.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136571338 136576956 - Kdm2b protein_coding retained_intron MGP_CBAJ_T0073808.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136576378 136586480 - MGP_CBAJ_P0073808 Kdm2b protein_coding protein_coding MGP_CBAJ_T0073809.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136576505 136578104 - Kdm2b protein_coding retained_intron MGP_CBAJ_T0073810.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136578086 136615596 - Kdm2b protein_coding processed_transcript MGP_CBAJ_T0073811.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136579298 136619979 - Kdm2b protein_coding processed_transcript MGP_CBAJ_T0073812.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136579308 136619420 - Kdm2b protein_coding retained_intron MGP_CBAJ_T0073813.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136585746 136702212 - Kdm2b protein_coding retained_intron MGP_CBAJ_T0073814.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136631852 136701656 - MGP_CBAJ_P0073814 Kdm2b protein_coding protein_coding MGP_CBAJ_T0073815.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136631955 136654708 - MGP_CBAJ_P0073815 Kdm2b protein_coding protein_coding MGP_CBAJ_T0073816.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136632038 136650237 - Kdm2b protein_coding processed_transcript MGP_CBAJ_T0073817.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136634216 136655319 - Kdm2b protein_coding processed_transcript MGP_CBAJ_T0073818.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136634236 136654192 - Kdm2b protein_coding processed_transcript MGP_CBAJ_T0073819.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136642936 136702219 - Kdm2b protein_coding retained_intron MGP_CBAJ_T0073820.1 MGP_CBAJ_G0029723.1 mouse_genomes_project 5 136649977 136698095 - Kdm2b protein_coding processed_transcript MGP_CBAJ_T0071241.1 MGP_CBAJ_G0029210.1 mouse_genomes_project 5 52462125 52567491 - MGP_CBAJ_P0071241 Adgra3 protein_coding protein_coding MGP_CBAJ_T0071242.1 MGP_CBAJ_G0029210.1 mouse_genomes_project 5 52468277 52474242 - Adgra3 protein_coding processed_transcript MGP_CBAJ_T0071243.1 MGP_CBAJ_G0029210.1 mouse_genomes_project 5 52489696 52503435 - Adgra3 protein_coding processed_transcript MGP_CBAJ_T0071244.1 MGP_CBAJ_G0029210.1 mouse_genomes_project 5 52508965 52513592 - Adgra3 protein_coding retained_intron MGP_CBAJ_T0071245.1 MGP_CBAJ_G0029210.1 mouse_genomes_project 5 52558877 52561866 - Adgra3 protein_coding retained_intron MGP_CBAJ_T0071246.1 MGP_CBAJ_G0029210.1 mouse_genomes_project 5 52559357 52567130 - Adgra3 protein_coding processed_transcript MGP_CBAJ_T0071247.1 MGP_CBAJ_G0029210.1 mouse_genomes_project 5 52566608 52567130 - Adgra3 protein_coding retained_intron MGP_CBAJ_T0075207.1 MGP_CBAJ_G0029984.1 mouse_genomes_project 5 159679513 159752592 - MGP_CBAJ_P0075207 protein_coding protein_coding MGP_CBAJ_T0075208.1 MGP_CBAJ_G0029984.1 mouse_genomes_project 5 159686946 159691472 - protein_coding processed_transcript MGP_CBAJ_T0075209.1 MGP_CBAJ_G0029984.1 mouse_genomes_project 5 159687801 159692015 - protein_coding retained_intron MGP_CBAJ_T0075210.1 MGP_CBAJ_G0029984.1 mouse_genomes_project 5 159713318 159791580 - MGP_CBAJ_P0075210 protein_coding protein_coding MGP_CBAJ_T0075211.1 MGP_CBAJ_G0029984.1 mouse_genomes_project 5 159722829 159724537 - protein_coding retained_intron MGP_CBAJ_T0075212.1 MGP_CBAJ_G0029984.1 mouse_genomes_project 5 159752377 159768549 - protein_coding processed_transcript MGP_CBAJ_T0075213.1 MGP_CBAJ_G0029984.1 mouse_genomes_project 5 159761114 159791298 - MGP_CBAJ_P0075213 protein_coding protein_coding MGP_CBAJ_T0008323.1 MGP_CBAJ_G0006743.1 mouse_genomes_project 5 160224784 160225709 - Rbakdn lincRNA lincRNA MGP_CBAJ_T0008324.1 MGP_CBAJ_G0006743.1 mouse_genomes_project 5 160224784 160225757 - Rbakdn lincRNA lincRNA MGP_CBAJ_T0075263.1 MGP_CBAJ_G0029995.1 mouse_genomes_project 5 160405164 160419083 - E130309D02Rik protein_coding processed_transcript MGP_CBAJ_T0075264.1 MGP_CBAJ_G0029995.1 mouse_genomes_project 5 160405176 160419379 - MGP_CBAJ_P0075264 E130309D02Rik protein_coding protein_coding MGP_CBAJ_T0075265.1 MGP_CBAJ_G0029995.1 mouse_genomes_project 5 160405178 160419150 - E130309D02Rik protein_coding retained_intron MGP_CBAJ_T0075266.1 MGP_CBAJ_G0029995.1 mouse_genomes_project 5 160412320 160419359 - E130309D02Rik protein_coding processed_transcript MGP_CBAJ_T0075106.1 MGP_CBAJ_G0029959.1 mouse_genomes_project 5 156367095 156385338 - MGP_CBAJ_P0075106 Gm26938 protein_coding protein_coding MGP_CBAJ_T0010600.1 MGP_CBAJ_G0008738.1 mouse_genomes_project 5 151670884 151670966 + Mir7035 miRNA miRNA MGP_CBAJ_T0001423.1 MGP_CBAJ_G0001347.1 mouse_genomes_project 5 13171060 13173331 + TEC TEC MGP_CBAJ_T0072127.1 MGP_CBAJ_G0029387.1 mouse_genomes_project 5 98172191 98181508 - MGP_CBAJ_P0072127 Cox18 protein_coding protein_coding MGP_CBAJ_T0072128.1 MGP_CBAJ_G0029387.1 mouse_genomes_project 5 98172191 98181479 - MGP_CBAJ_P0072128 Cox18 protein_coding protein_coding MGP_CBAJ_T0072129.1 MGP_CBAJ_G0029387.1 mouse_genomes_project 5 98172194 98173049 - Cox18 protein_coding processed_transcript MGP_CBAJ_T0072130.1 MGP_CBAJ_G0029387.1 mouse_genomes_project 5 98172194 98175346 - Cox18 protein_coding retained_intron MGP_CBAJ_T0072131.1 MGP_CBAJ_G0029387.1 mouse_genomes_project 5 98172197 98173490 - Cox18 protein_coding retained_intron MGP_CBAJ_T0072132.1 MGP_CBAJ_G0029387.1 mouse_genomes_project 5 98175000 98177259 - Cox18 protein_coding retained_intron MGP_CBAJ_T0072133.1 MGP_CBAJ_G0029387.1 mouse_genomes_project 5 98176401 98181446 - MGP_CBAJ_P0072133 Cox18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0017899.1 MGP_CBAJ_G0015343.1 mouse_genomes_project 5 70344701 70347586 - processed_transcript antisense MGP_CBAJ_T0017900.1 MGP_CBAJ_G0015343.1 mouse_genomes_project 5 70345155 70347077 - processed_transcript antisense MGP_CBAJ_T0017901.1 MGP_CBAJ_G0015343.1 mouse_genomes_project 5 70346092 70350432 - processed_transcript retained_intron MGP_CBAJ_T0014909.1 MGP_CBAJ_G0013021.1 mouse_genomes_project 5 125937692 125938757 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0070807.1 MGP_CBAJ_G0029137.1 mouse_genomes_project 5 35588161 35694860 + MGP_CBAJ_P0070807 Grk4 protein_coding protein_coding MGP_CBAJ_T0070808.1 MGP_CBAJ_G0029137.1 mouse_genomes_project 5 35588161 35641075 + MGP_CBAJ_P0070808 Grk4 protein_coding protein_coding MGP_CBAJ_T0070809.1 MGP_CBAJ_G0029137.1 mouse_genomes_project 5 35588735 35694751 + MGP_CBAJ_P0070809 Grk4 protein_coding unknown_likely_coding MGP_CBAJ_T0070810.1 MGP_CBAJ_G0029137.1 mouse_genomes_project 5 35588757 35610224 + MGP_CBAJ_P0070810 Grk4 protein_coding protein_coding MGP_CBAJ_T0070811.1 MGP_CBAJ_G0029137.1 mouse_genomes_project 5 35651970 35682550 + Grk4 protein_coding processed_transcript MGP_CBAJ_T0070812.1 MGP_CBAJ_G0029137.1 mouse_genomes_project 5 35681655 35694862 + Grk4 protein_coding processed_transcript MGP_CBAJ_T0001737.1 MGP_CBAJ_G0001655.1 mouse_genomes_project 5 127090175 127091490 + TEC TEC MGP_CBAJ_T0011485.1 MGP_CBAJ_G0009623.1 mouse_genomes_project 5 147844695 147844974 + Gm25722 misc_RNA misc_RNA MGP_CBAJ_T0075709.1 MGP_CBAJ_G0030089.1 mouse_genomes_project 5 169606090 169773569 - MGP_CBAJ_P0075709 Stard13 protein_coding protein_coding MGP_CBAJ_T0075710.1 MGP_CBAJ_G0030089.1 mouse_genomes_project 5 169608117 169773469 - MGP_CBAJ_P0075710 Stard13 protein_coding protein_coding MGP_CBAJ_T0075711.1 MGP_CBAJ_G0030089.1 mouse_genomes_project 5 169634713 169773575 - Stard13 protein_coding processed_transcript MGP_CBAJ_T0075712.1 MGP_CBAJ_G0030089.1 mouse_genomes_project 5 169634814 169663010 - Stard13 protein_coding processed_transcript MGP_CBAJ_T0075714.1 MGP_CBAJ_G0030089.1 mouse_genomes_project 5 169634817 169821351 - MGP_CBAJ_P0075714 Stard13 protein_coding protein_coding MGP_CBAJ_T0075715.1 MGP_CBAJ_G0030089.1 mouse_genomes_project 5 169634864 169673260 - Stard13 protein_coding processed_transcript MGP_CBAJ_T0075716.1 MGP_CBAJ_G0030089.1 mouse_genomes_project 5 169645025 169773525 - Stard13 protein_coding retained_intron MGP_CBAJ_T0075717.1 MGP_CBAJ_G0030089.1 mouse_genomes_project 5 169647069 169821413 - MGP_CBAJ_P0075717 Stard13 protein_coding protein_coding MGP_CBAJ_T0075718.1 MGP_CBAJ_G0030089.1 mouse_genomes_project 5 169672933 169686226 - Stard13 protein_coding processed_transcript MGP_CBAJ_T0070306.1 MGP_CBAJ_G0029064.1 mouse_genomes_project 5 31199088 31201602 + MGP_CBAJ_P0070306 Agbl5 protein_coding protein_coding MGP_CBAJ_T0070307.1 MGP_CBAJ_G0029064.1 mouse_genomes_project 5 31199246 31207082 + MGP_CBAJ_P0070307 Agbl5 protein_coding protein_coding MGP_CBAJ_T0070308.1 MGP_CBAJ_G0029064.1 mouse_genomes_project 5 31199329 31217336 + MGP_CBAJ_P0070308 Agbl5 protein_coding protein_coding MGP_CBAJ_T0070309.1 MGP_CBAJ_G0029064.1 mouse_genomes_project 5 31199335 31204228 + Agbl5 protein_coding retained_intron MGP_CBAJ_T0070310.1 MGP_CBAJ_G0029064.1 mouse_genomes_project 5 31199350 31217038 + Agbl5 protein_coding retained_intron MGP_CBAJ_T0070311.1 MGP_CBAJ_G0029064.1 mouse_genomes_project 5 31199363 31206479 + Agbl5 protein_coding retained_intron MGP_CBAJ_T0070312.1 MGP_CBAJ_G0029064.1 mouse_genomes_project 5 31199363 31217037 + MGP_CBAJ_P0070312 Agbl5 protein_coding protein_coding MGP_CBAJ_T0070313.1 MGP_CBAJ_G0029064.1 mouse_genomes_project 5 31199368 31213858 + MGP_CBAJ_P0070313 Agbl5 protein_coding protein_coding MGP_CBAJ_T0070314.1 MGP_CBAJ_G0029064.1 mouse_genomes_project 5 31199395 31217037 + MGP_CBAJ_P0070314 Agbl5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070315.1 MGP_CBAJ_G0029064.1 mouse_genomes_project 5 31199400 31213858 + MGP_CBAJ_P0070315 Agbl5 protein_coding protein_coding MGP_CBAJ_T0070316.1 MGP_CBAJ_G0029064.1 mouse_genomes_project 5 31199400 31217037 + MGP_CBAJ_P0070316 Agbl5 protein_coding protein_coding MGP_CBAJ_T0070317.1 MGP_CBAJ_G0029064.1 mouse_genomes_project 5 31199720 31202264 + MGP_CBAJ_P0070317 Agbl5 protein_coding protein_coding MGP_CBAJ_T0070318.1 MGP_CBAJ_G0029064.1 mouse_genomes_project 5 31200676 31202842 + Agbl5 protein_coding processed_transcript MGP_CBAJ_T0070319.1 MGP_CBAJ_G0029064.1 mouse_genomes_project 5 31204598 31206489 + Agbl5 protein_coding retained_intron MGP_CBAJ_T0070321.1 MGP_CBAJ_G0029064.1 mouse_genomes_project 5 31205533 31206510 + Agbl5 protein_coding retained_intron MGP_CBAJ_T0070322.1 MGP_CBAJ_G0029064.1 mouse_genomes_project 5 31206327 31216281 + MGP_CBAJ_P0070322 Agbl5 protein_coding protein_coding MGP_CBAJ_T0073408.1 MGP_CBAJ_G0029649.1 mouse_genomes_project 5 129800141 129844069 + MGP_CBAJ_P0073408 Vsig10 protein_coding protein_coding MGP_CBAJ_T0073409.1 MGP_CBAJ_G0029649.1 mouse_genomes_project 5 129802882 129842175 + MGP_CBAJ_P0073409 Vsig10 protein_coding protein_coding MGP_CBAJ_T0073410.1 MGP_CBAJ_G0029649.1 mouse_genomes_project 5 129802908 129828112 + Vsig10 protein_coding retained_intron MGP_CBAJ_T0073411.1 MGP_CBAJ_G0029649.1 mouse_genomes_project 5 129802951 129808791 + Vsig10 protein_coding retained_intron MGP_CBAJ_T0073412.1 MGP_CBAJ_G0029649.1 mouse_genomes_project 5 129807236 129844061 + Vsig10 protein_coding processed_transcript MGP_CBAJ_T0073413.1 MGP_CBAJ_G0029649.1 mouse_genomes_project 5 129838973 129844069 + Vsig10 protein_coding processed_transcript MGP_CBAJ_T0010574.1 MGP_CBAJ_G0008712.1 mouse_genomes_project 5 109908068 109908144 - Gm23222 miRNA miRNA MGP_CBAJ_T0072486.1 MGP_CBAJ_G0029466.1 mouse_genomes_project 5 111437156 111592342 - MGP_CBAJ_P0072486 Wdfy3 protein_coding unknown_likely_coding MGP_CBAJ_T0072487.1 MGP_CBAJ_G0029466.1 mouse_genomes_project 5 111437157 111688984 - MGP_CBAJ_P0072487 Wdfy3 protein_coding protein_coding MGP_CBAJ_T0072488.1 MGP_CBAJ_G0029466.1 mouse_genomes_project 5 111439138 111455715 - Wdfy3 protein_coding retained_intron MGP_CBAJ_T0072489.1 MGP_CBAJ_G0029466.1 mouse_genomes_project 5 111440359 111592342 - MGP_CBAJ_P0072489 Wdfy3 protein_coding protein_coding MGP_CBAJ_T0072490.1 MGP_CBAJ_G0029466.1 mouse_genomes_project 5 111533354 111541391 - MGP_CBAJ_P0072490 Wdfy3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072491.1 MGP_CBAJ_G0029466.1 mouse_genomes_project 5 111539843 111688984 - MGP_CBAJ_P0072491 Wdfy3 protein_coding protein_coding MGP_CBAJ_T0072492.1 MGP_CBAJ_G0029466.1 mouse_genomes_project 5 111545618 111548214 - Wdfy3 protein_coding processed_transcript MGP_CBAJ_T0001808.1 MGP_CBAJ_G0001725.1 mouse_genomes_project 5 145711662 145715052 - TEC TEC MGP_CBAJ_T0070760.1 MGP_CBAJ_G0029133.1 mouse_genomes_project 5 35431752 35465286 + MGP_CBAJ_P0070760 Sh3bp2 protein_coding protein_coding MGP_CBAJ_T0070761.1 MGP_CBAJ_G0029133.1 mouse_genomes_project 5 35431760 35477456 + MGP_CBAJ_P0070761 Sh3bp2 protein_coding protein_coding MGP_CBAJ_T0070762.1 MGP_CBAJ_G0029133.1 mouse_genomes_project 5 35449439 35471430 + Sh3bp2 protein_coding retained_intron MGP_CBAJ_T0070763.1 MGP_CBAJ_G0029133.1 mouse_genomes_project 5 35449439 35466332 + MGP_CBAJ_P0070763 Sh3bp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070764.1 MGP_CBAJ_G0029133.1 mouse_genomes_project 5 35449439 35477440 + MGP_CBAJ_P0070764 Sh3bp2 protein_coding protein_coding MGP_CBAJ_T0070765.1 MGP_CBAJ_G0029133.1 mouse_genomes_project 5 35455650 35477440 + MGP_CBAJ_P0070765 Sh3bp2 protein_coding protein_coding MGP_CBAJ_T0070766.1 MGP_CBAJ_G0029133.1 mouse_genomes_project 5 35455762 35477453 + MGP_CBAJ_P0070766 Sh3bp2 protein_coding protein_coding MGP_CBAJ_T0070767.1 MGP_CBAJ_G0029133.1 mouse_genomes_project 5 35465130 35466378 + Sh3bp2 protein_coding retained_intron MGP_CBAJ_T0070452.1 MGP_CBAJ_G0029086.1 mouse_genomes_project 5 31618340 31629052 + MGP_CBAJ_P0070452 Nrbp1 protein_coding protein_coding MGP_CBAJ_T0070453.1 MGP_CBAJ_G0029086.1 mouse_genomes_project 5 31618340 31629046 + MGP_CBAJ_P0070453 Nrbp1 protein_coding protein_coding MGP_CBAJ_T0070454.1 MGP_CBAJ_G0029086.1 mouse_genomes_project 5 31618353 31622435 + MGP_CBAJ_P0070454 Nrbp1 protein_coding protein_coding MGP_CBAJ_T0070455.1 MGP_CBAJ_G0029086.1 mouse_genomes_project 5 31618371 31623321 + Nrbp1 protein_coding retained_intron MGP_CBAJ_T0070456.1 MGP_CBAJ_G0029086.1 mouse_genomes_project 5 31618379 31622356 + MGP_CBAJ_P0070456 Nrbp1 protein_coding protein_coding MGP_CBAJ_T0070457.1 MGP_CBAJ_G0029086.1 mouse_genomes_project 5 31618408 31625400 + MGP_CBAJ_P0070457 Nrbp1 protein_coding protein_coding MGP_CBAJ_T0070458.1 MGP_CBAJ_G0029086.1 mouse_genomes_project 5 31620901 31621910 + Nrbp1 protein_coding retained_intron MGP_CBAJ_T0070459.1 MGP_CBAJ_G0029086.1 mouse_genomes_project 5 31624908 31627467 + Nrbp1 protein_coding retained_intron MGP_CBAJ_T0070460.1 MGP_CBAJ_G0029086.1 mouse_genomes_project 5 31626840 31629049 + Nrbp1 protein_coding retained_intron MGP_CBAJ_T0070461.1 MGP_CBAJ_G0029086.1 mouse_genomes_project 5 31627076 31628219 + Nrbp1 protein_coding retained_intron MGP_CBAJ_T0070462.1 MGP_CBAJ_G0029086.1 mouse_genomes_project 5 31627830 31628935 + Nrbp1 protein_coding retained_intron MGP_CBAJ_T0101127.1 MGP_CBAJ_G0039321.1 mouse_genomes_project 5 29283644 29284486 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101135.1 MGP_CBAJ_G0039328.1 mouse_genomes_project 5 77980286 77981461 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0099374.1 MGP_CBAJ_G0037629.1 mouse_genomes_project 5 101386978 101387086 - Gm25521 snRNA snRNA MGP_CBAJ_T0072383.1 MGP_CBAJ_G0029448.1 mouse_genomes_project 5 108524610 109001141 - MGP_CBAJ_P0072383 protein_coding protein_coding MGP_CBAJ_T0072384.1 MGP_CBAJ_G0029448.1 mouse_genomes_project 5 108606173 109001158 - MGP_CBAJ_P0072384 protein_coding protein_coding MGP_CBAJ_T0072385.1 MGP_CBAJ_G0029448.1 mouse_genomes_project 5 108801729 109001161 - protein_coding retained_intron MGP_CBAJ_T0072386.1 MGP_CBAJ_G0029448.1 mouse_genomes_project 5 108939937 109000917 - protein_coding processed_transcript MGP_CBAJ_T0072387.1 MGP_CBAJ_G0029448.1 mouse_genomes_project 5 108995562 109001152 - MGP_CBAJ_P0072387 protein_coding protein_coding MGP_CBAJ_T0001508.1 MGP_CBAJ_G0001429.1 mouse_genomes_project 5 47749971 47750978 - TEC TEC MGP_CBAJ_T0014969.1 MGP_CBAJ_G0013081.1 mouse_genomes_project 5 161242612 161243569 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0074724.1 MGP_CBAJ_G0029880.1 mouse_genomes_project 5 152800881 152819895 - MGP_CBAJ_P0074724 Serpine1 protein_coding protein_coding MGP_CBAJ_T0074725.1 MGP_CBAJ_G0029880.1 mouse_genomes_project 5 152800889 152819890 - MGP_CBAJ_P0074725 Serpine1 protein_coding protein_coding MGP_CBAJ_T0074726.1 MGP_CBAJ_G0029880.1 mouse_genomes_project 5 152816237 152819904 - Serpine1 protein_coding retained_intron MGP_CBAJ_T0004560.1 MGP_CBAJ_G0003948.1 mouse_genomes_project 5 22594067 22622405 - Gm42948 antisense antisense MGP_CBAJ_T0008322.1 MGP_CBAJ_G0006742.1 mouse_genomes_project 5 157294853 157295616 - Gm43703 lincRNA lincRNA MGP_CBAJ_T0001428.1 MGP_CBAJ_G0001352.1 mouse_genomes_project 5 15158507 15159998 + TEC TEC MGP_CBAJ_T0075616.1 MGP_CBAJ_G0030075.1 mouse_genomes_project 5 167522097 167552191 + MGP_CBAJ_P0075616 Alox5ap protein_coding protein_coding MGP_CBAJ_T0075617.1 MGP_CBAJ_G0030075.1 mouse_genomes_project 5 167543154 167551891 + MGP_CBAJ_P0075617 Alox5ap protein_coding protein_coding MGP_CBAJ_T0075618.1 MGP_CBAJ_G0030075.1 mouse_genomes_project 5 167551555 167552185 + Alox5ap protein_coding processed_transcript MGP_CBAJ_T0072859.1 MGP_CBAJ_G0029546.1 mouse_genomes_project 5 121552518 121564816 - MGP_CBAJ_P0072859 Pgam5 protein_coding protein_coding MGP_CBAJ_T0072860.1 MGP_CBAJ_G0029546.1 mouse_genomes_project 5 121552544 121564790 - MGP_CBAJ_P0072860 Pgam5 protein_coding protein_coding MGP_CBAJ_T0072861.1 MGP_CBAJ_G0029546.1 mouse_genomes_project 5 121560114 121560913 - Pgam5 protein_coding retained_intron MGP_CBAJ_T0072862.1 MGP_CBAJ_G0029546.1 mouse_genomes_project 5 121560459 121564757 - MGP_CBAJ_P0072862 Pgam5 protein_coding protein_coding MGP_CBAJ_T0069897.1 MGP_CBAJ_G0028982.1 mouse_genomes_project 5 20714254 20723136 + Lrrc17 protein_coding processed_transcript MGP_CBAJ_T0069898.1 MGP_CBAJ_G0028982.1 mouse_genomes_project 5 20714258 20751595 + MGP_CBAJ_P0069898 Lrrc17 protein_coding protein_coding MGP_CBAJ_T0070951.1 MGP_CBAJ_G0029161.1 mouse_genomes_project 5 37942447 37947634 - MGP_CBAJ_P0070951 Gm5814 protein_coding protein_coding MGP_CBAJ_T0014957.1 MGP_CBAJ_G0013069.1 mouse_genomes_project 5 154956565 154957116 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0070575.1 MGP_CBAJ_G0029102.1 mouse_genomes_project 5 33217491 33300205 + MGP_CBAJ_P0070575 Yes1 protein_coding protein_coding MGP_CBAJ_T0070576.1 MGP_CBAJ_G0029102.1 mouse_genomes_project 5 33217770 33302503 + MGP_CBAJ_P0070576 Yes1 protein_coding protein_coding MGP_CBAJ_T0070577.1 MGP_CBAJ_G0029102.1 mouse_genomes_project 5 33217784 33222588 + Yes1 protein_coding retained_intron MGP_CBAJ_T0070578.1 MGP_CBAJ_G0029102.1 mouse_genomes_project 5 33249222 33267678 + MGP_CBAJ_P0070578 Yes1 protein_coding protein_coding MGP_CBAJ_T0098406.1 MGP_CBAJ_G0036672.1 mouse_genomes_project 5 45738517 45739792 + Gm16014 sense_intronic sense_intronic MGP_CBAJ_T0001649.1 MGP_CBAJ_G0001567.1 mouse_genomes_project 5 78764680 78765558 + TEC TEC MGP_CBAJ_T0001406.1 MGP_CBAJ_G0001330.1 mouse_genomes_project 5 7346632 7349295 - TEC TEC MGP_CBAJ_T0014654.1 MGP_CBAJ_G0012766.1 mouse_genomes_project 5 14860433 14861217 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014808.1 MGP_CBAJ_G0012920.1 mouse_genomes_project 5 80775304 80777381 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001524.1 MGP_CBAJ_G0001445.1 mouse_genomes_project 5 51171101 51172322 - TEC TEC MGP_CBAJ_T0001690.1 MGP_CBAJ_G0001608.1 mouse_genomes_project 5 107478993 107483925 + TEC TEC MGP_CBAJ_T0001778.1 MGP_CBAJ_G0001696.1 mouse_genomes_project 5 136850106 136851666 + TEC TEC MGP_CBAJ_T0073735.1 MGP_CBAJ_G0029715.1 mouse_genomes_project 5 136031261 136058779 + MGP_CBAJ_P0073735 Anapc7 protein_coding protein_coding MGP_CBAJ_T0073736.1 MGP_CBAJ_G0029715.1 mouse_genomes_project 5 136032012 136058779 + MGP_CBAJ_P0073736 Anapc7 protein_coding protein_coding MGP_CBAJ_T0073737.1 MGP_CBAJ_G0029715.1 mouse_genomes_project 5 136032049 136057301 + MGP_CBAJ_P0073737 Anapc7 protein_coding protein_coding MGP_CBAJ_T0073738.1 MGP_CBAJ_G0029715.1 mouse_genomes_project 5 136053240 136054352 + Anapc7 protein_coding retained_intron MGP_CBAJ_T0073739.1 MGP_CBAJ_G0029715.1 mouse_genomes_project 5 136054005 136055670 + Anapc7 protein_coding retained_intron MGP_CBAJ_T0073740.1 MGP_CBAJ_G0029715.1 mouse_genomes_project 5 136055241 136055649 + MGP_CBAJ_P0073740 Anapc7 protein_coding protein_coding MGP_CBAJ_T0004733.1 MGP_CBAJ_G0004075.1 mouse_genomes_project 5 134707735 134713028 + antisense antisense MGP_CBAJ_T0075634.1 MGP_CBAJ_G0030079.1 mouse_genomes_project 5 167948862 167970714 - MGP_CBAJ_P0075634 Hsph1 protein_coding protein_coding MGP_CBAJ_T0075635.1 MGP_CBAJ_G0030079.1 mouse_genomes_project 5 167951119 167970881 - MGP_CBAJ_P0075635 Hsph1 protein_coding protein_coding MGP_CBAJ_T0075636.1 MGP_CBAJ_G0030079.1 mouse_genomes_project 5 167951420 167970752 - MGP_CBAJ_P0075636 Hsph1 protein_coding protein_coding MGP_CBAJ_T0075637.1 MGP_CBAJ_G0030079.1 mouse_genomes_project 5 167951744 167970881 - MGP_CBAJ_P0075637 Hsph1 protein_coding protein_coding MGP_CBAJ_T0075638.1 MGP_CBAJ_G0030079.1 mouse_genomes_project 5 167952030 167953749 - Hsph1 protein_coding retained_intron MGP_CBAJ_T0075639.1 MGP_CBAJ_G0030079.1 mouse_genomes_project 5 167954468 167955763 - Hsph1 protein_coding retained_intron MGP_CBAJ_T0075640.1 MGP_CBAJ_G0030079.1 mouse_genomes_project 5 167955257 167970881 - Hsph1 protein_coding retained_intron MGP_CBAJ_T0075641.1 MGP_CBAJ_G0030079.1 mouse_genomes_project 5 167964526 167970919 - MGP_CBAJ_P0075641 Hsph1 protein_coding protein_coding MGP_CBAJ_T0075642.1 MGP_CBAJ_G0030079.1 mouse_genomes_project 5 167964982 167970833 - MGP_CBAJ_P0075642 Hsph1 protein_coding protein_coding MGP_CBAJ_T0075643.1 MGP_CBAJ_G0030079.1 mouse_genomes_project 5 167966581 167970894 - MGP_CBAJ_P0075643 Hsph1 protein_coding protein_coding MGP_CBAJ_T0075644.1 MGP_CBAJ_G0030079.1 mouse_genomes_project 5 167966640 167968430 - Hsph1 protein_coding processed_transcript MGP_CBAJ_T0069552.1 MGP_CBAJ_G0028922.1 mouse_genomes_project 5 551906 564513 - MGP_CBAJ_P0069552 Rbm48 protein_coding protein_coding MGP_CBAJ_T0069553.1 MGP_CBAJ_G0028922.1 mouse_genomes_project 5 552704 563987 - MGP_CBAJ_P0069553 Rbm48 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069554.1 MGP_CBAJ_G0028922.1 mouse_genomes_project 5 558707 560071 - Rbm48 protein_coding retained_intron MGP_CBAJ_T0069555.1 MGP_CBAJ_G0028922.1 mouse_genomes_project 5 559411 564010 - Rbm48 protein_coding retained_intron MGP_CBAJ_T0069556.1 MGP_CBAJ_G0028922.1 mouse_genomes_project 5 560185 564130 - MGP_CBAJ_P0069556 Rbm48 protein_coding protein_coding MGP_CBAJ_T0070950.1 MGP_CBAJ_G0029160.1 mouse_genomes_project 5 37884000 37885273 - MGP_CBAJ_P0070950 Bloc1s4 protein_coding protein_coding MGP_CBAJ_T0001427.1 MGP_CBAJ_G0001351.1 mouse_genomes_project 5 15121774 15122767 + TEC TEC MGP_CBAJ_T0004558.1 MGP_CBAJ_G0003946.1 mouse_genomes_project 5 21153716 21211553 + Gm10475 antisense antisense MGP_CBAJ_T0001436.1 MGP_CBAJ_G0001360.1 mouse_genomes_project 5 23272519 23273403 + TEC TEC MGP_CBAJ_T0014780.1 MGP_CBAJ_G0012892.1 mouse_genomes_project 5 65799296 65799916 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004625.1 MGP_CBAJ_G0004000.1 mouse_genomes_project 5 72212847 72223132 + Gm26756 antisense antisense MGP_CBAJ_T0008098.1 MGP_CBAJ_G0006593.1 mouse_genomes_project 5 100092950 100094950 - Gm43688 lincRNA lincRNA MGP_CBAJ_T0011461.1 MGP_CBAJ_G0009599.1 mouse_genomes_project 5 22937067 22937397 - Gm25219 misc_RNA misc_RNA MGP_CBAJ_T0101939.1 MGP_CBAJ_G0039970.1 mouse_genomes_project 5 94579188 94592267 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0074251.1 MGP_CBAJ_G0029798.1 mouse_genomes_project 5 144536830 144550297 + MGP_CBAJ_P0074251 Zbed5 protein_coding protein_coding MGP_CBAJ_T0074252.1 MGP_CBAJ_G0029798.1 mouse_genomes_project 5 144536875 144542245 + Zbed5 protein_coding retained_intron MGP_CBAJ_T0001487.1 MGP_CBAJ_G0001408.1 mouse_genomes_project 5 45398035 45400141 + TEC TEC MGP_CBAJ_T0101961.1 MGP_CBAJ_G0039992.1 mouse_genomes_project 5 166546492 166546800 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0004545.1 MGP_CBAJ_G0003935.1 mouse_genomes_project 5 593714 594448 - Gm43825 antisense antisense MGP_CBAJ_T0070004.1 MGP_CBAJ_G0029002.1 mouse_genomes_project 5 23952774 23977009 + MGP_CBAJ_P0070004 Nos3 protein_coding protein_coding MGP_CBAJ_T0070005.1 MGP_CBAJ_G0029002.1 mouse_genomes_project 5 23952774 23976862 + MGP_CBAJ_P0070005 Nos3 protein_coding protein_coding MGP_CBAJ_T0001664.1 MGP_CBAJ_G0001582.1 mouse_genomes_project 5 81632799 81634921 + TEC TEC MGP_CBAJ_T0001861.1 MGP_CBAJ_G0001777.1 mouse_genomes_project 5 160663226 160664315 + TEC TEC MGP_CBAJ_T0007955.1 MGP_CBAJ_G0006487.1 mouse_genomes_project 5 22838302 22876258 - lincRNA lincRNA MGP_CBAJ_T0007956.1 MGP_CBAJ_G0006487.1 mouse_genomes_project 5 22865329 22876231 - lincRNA lincRNA MGP_CBAJ_T0007957.1 MGP_CBAJ_G0006487.1 mouse_genomes_project 5 22874733 22876841 - lincRNA lincRNA MGP_CBAJ_T0007958.1 MGP_CBAJ_G0006487.1 mouse_genomes_project 5 22875210 22877191 - lincRNA lincRNA MGP_CBAJ_T0071042.1 MGP_CBAJ_G0029177.1 mouse_genomes_project 5 39535747 39570229 + MGP_CBAJ_P0071042 Otop1 protein_coding protein_coding MGP_CBAJ_T0071043.1 MGP_CBAJ_G0029177.1 mouse_genomes_project 5 39537176 39570237 + Otop1 protein_coding processed_transcript MGP_CBAJ_T0071044.1 MGP_CBAJ_G0029177.1 mouse_genomes_project 5 39537176 39570228 + MGP_CBAJ_P0071044 Otop1 protein_coding protein_coding MGP_CBAJ_T0071045.1 MGP_CBAJ_G0029177.1 mouse_genomes_project 5 39549328 39569397 + Otop1 protein_coding processed_transcript MGP_CBAJ_T0011475.1 MGP_CBAJ_G0009613.1 mouse_genomes_project 5 113353536 113353829 + Gm23085 misc_RNA misc_RNA MGP_CBAJ_T0014706.1 MGP_CBAJ_G0012818.1 mouse_genomes_project 5 29960784 29961299 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007951.1 MGP_CBAJ_G0006485.1 mouse_genomes_project 5 22086148 22094104 - A930003O13Rik lincRNA lincRNA MGP_CBAJ_T0007952.1 MGP_CBAJ_G0006485.1 mouse_genomes_project 5 22086586 22089683 - A930003O13Rik lincRNA lincRNA MGP_CBAJ_T0007953.1 MGP_CBAJ_G0006485.1 mouse_genomes_project 5 22091238 22094124 - A930003O13Rik lincRNA lincRNA MGP_CBAJ_T0008065.1 MGP_CBAJ_G0006565.1 mouse_genomes_project 5 80461465 80466032 + Gm42575 lincRNA lincRNA MGP_CBAJ_T0014943.1 MGP_CBAJ_G0013055.1 mouse_genomes_project 5 151782698 151783473 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001453.1 MGP_CBAJ_G0001375.1 mouse_genomes_project 5 31576599 31580576 - TEC TEC MGP_CBAJ_T0010583.1 MGP_CBAJ_G0008721.1 mouse_genomes_project 5 126679468 126679532 + Mir7028 miRNA miRNA MGP_CBAJ_T0073556.1 MGP_CBAJ_G0029686.1 mouse_genomes_project 5 134494828 134499589 + MGP_CBAJ_P0073556 Rpl6 protein_coding protein_coding MGP_CBAJ_T0073557.1 MGP_CBAJ_G0029686.1 mouse_genomes_project 5 134494893 134495607 + Rpl6 protein_coding retained_intron MGP_CBAJ_T0073558.1 MGP_CBAJ_G0029686.1 mouse_genomes_project 5 134496985 134497732 + Rpl6 protein_coding retained_intron MGP_CBAJ_T0073559.1 MGP_CBAJ_G0029686.1 mouse_genomes_project 5 134497071 134499313 + MGP_CBAJ_P0073559 Rpl6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073560.1 MGP_CBAJ_G0029686.1 mouse_genomes_project 5 134498543 134499314 + Rpl6 protein_coding retained_intron MGP_CBAJ_T0075468.1 MGP_CBAJ_G0030044.1 mouse_genomes_project 5 163785375 163806017 - MGP_CBAJ_P0075468 protein_coding protein_coding MGP_CBAJ_T0010565.1 MGP_CBAJ_G0008703.1 mouse_genomes_project 5 81704835 81704936 + Gm25374 miRNA miRNA MGP_CBAJ_T0073707.1 MGP_CBAJ_G0029709.1 mouse_genomes_project 5 135881181 135921356 + MGP_CBAJ_P0073707 Pptc7 protein_coding protein_coding MGP_CBAJ_T0001507.1 MGP_CBAJ_G0001428.1 mouse_genomes_project 5 47625761 47629575 + TEC TEC MGP_CBAJ_T0008148.1 MGP_CBAJ_G0006629.1 mouse_genomes_project 5 116568653 116583596 + Gm42914 lincRNA lincRNA MGP_CBAJ_T0075180.1 MGP_CBAJ_G0029977.1 mouse_genomes_project 5 159287082 159305160 + MGP_CBAJ_P0075180 Foxk1 protein_coding protein_coding MGP_CBAJ_T0075181.1 MGP_CBAJ_G0029977.1 mouse_genomes_project 5 159287085 159358307 + MGP_CBAJ_P0075181 Foxk1 protein_coding protein_coding MGP_CBAJ_T0069755.1 MGP_CBAJ_G0028951.1 mouse_genomes_project 5 6795392 6851724 + MGP_CBAJ_P0069755 Tmem243 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069756.1 MGP_CBAJ_G0028951.1 mouse_genomes_project 5 6795999 6813269 + MGP_CBAJ_P0069756 Tmem243 protein_coding protein_coding MGP_CBAJ_T0069774.1 MGP_CBAJ_G0028951.1 mouse_genomes_project 5 6849376 6854630 + Tmem243 protein_coding processed_transcript MGP_CBAJ_T0074426.1 MGP_CBAJ_G0029824.1 mouse_genomes_project 5 149876696 149902265 - MGP_CBAJ_P0074426 Lat2 protein_coding protein_coding MGP_CBAJ_T0074427.1 MGP_CBAJ_G0029824.1 mouse_genomes_project 5 149876777 149902230 - MGP_CBAJ_P0074427 Lat2 protein_coding protein_coding MGP_CBAJ_T0074428.1 MGP_CBAJ_G0029824.1 mouse_genomes_project 5 149876912 149889382 - MGP_CBAJ_P0074428 Lat2 protein_coding protein_coding MGP_CBAJ_T0074429.1 MGP_CBAJ_G0029824.1 mouse_genomes_project 5 149877105 149886734 - MGP_CBAJ_P0074429 Lat2 protein_coding protein_coding MGP_CBAJ_T0074430.1 MGP_CBAJ_G0029824.1 mouse_genomes_project 5 149877243 149886179 - Lat2 protein_coding processed_transcript MGP_CBAJ_T0074431.1 MGP_CBAJ_G0029824.1 mouse_genomes_project 5 149877472 149902246 - MGP_CBAJ_P0074431 Lat2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074432.1 MGP_CBAJ_G0029824.1 mouse_genomes_project 5 149877485 149884291 - Lat2 protein_coding retained_intron MGP_CBAJ_T0074433.1 MGP_CBAJ_G0029824.1 mouse_genomes_project 5 149885139 149902225 - Lat2 protein_coding processed_transcript MGP_CBAJ_T0074434.1 MGP_CBAJ_G0029824.1 mouse_genomes_project 5 149886308 149902206 - MGP_CBAJ_P0074434 Lat2 protein_coding protein_coding MGP_CBAJ_T0074435.1 MGP_CBAJ_G0029824.1 mouse_genomes_project 5 149886413 149888537 - Lat2 protein_coding retained_intron MGP_CBAJ_T0010577.1 MGP_CBAJ_G0008715.1 mouse_genomes_project 5 117155887 117155972 - Gm27527 miRNA miRNA MGP_CBAJ_T0100632.1 MGP_CBAJ_G0038887.1 mouse_genomes_project 5 118314104 118314198 + Snord21 snoRNA snoRNA MGP_CBAJ_T0100643.1 MGP_CBAJ_G0038898.1 mouse_genomes_project 5 164605993 164606122 + Gm23202 snoRNA snoRNA MGP_CBAJ_T0069596.1 MGP_CBAJ_G0028928.1 mouse_genomes_project 5 840402 865374 + MGP_CBAJ_P0069596 Lrrd1 protein_coding protein_coding MGP_CBAJ_T0069597.1 MGP_CBAJ_G0028928.1 mouse_genomes_project 5 840416 845411 + MGP_CBAJ_P0069597 Lrrd1 protein_coding protein_coding MGP_CBAJ_T0000002.1 MGP_CBAJ_G0000002.1 mouse_genomes_project 5 19773915 19777691 + Gm29254 3prime_overlapping_ncRNA 3prime_overlapping_ncRNA MGP_CBAJ_T0000003.1 MGP_CBAJ_G0000002.1 mouse_genomes_project 5 19773915 19777688 + Gm29254 3prime_overlapping_ncRNA 3prime_overlapping_ncRNA MGP_CBAJ_T0014914.1 MGP_CBAJ_G0013026.1 mouse_genomes_project 5 127109607 127110057 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008375.1 MGP_CBAJ_G0006782.1 mouse_genomes_project 5 169094507 169105108 - Gm43597 lincRNA lincRNA MGP_CBAJ_T0008376.1 MGP_CBAJ_G0006782.1 mouse_genomes_project 5 169094512 169105071 - Gm43597 lincRNA lincRNA MGP_CBAJ_T0008377.1 MGP_CBAJ_G0006782.1 mouse_genomes_project 5 169096474 169104988 - Gm43597 lincRNA lincRNA MGP_CBAJ_T0004619.1 MGP_CBAJ_G0003995.1 mouse_genomes_project 5 70816931 70844028 - 1700126H18Rik antisense antisense MGP_CBAJ_T0075205.1 MGP_CBAJ_G0029983.1 mouse_genomes_project 5 159637976 159665757 + MGP_CBAJ_P0075205 Slc29a4 protein_coding protein_coding MGP_CBAJ_T0075206.1 MGP_CBAJ_G0029983.1 mouse_genomes_project 5 159655055 159677528 + MGP_CBAJ_P0075206 Slc29a4 protein_coding protein_coding MGP_CBAJ_T0008064.1 MGP_CBAJ_G0006564.1 mouse_genomes_project 5 80439512 80444733 - lincRNA lincRNA MGP_CBAJ_T0100603.1 MGP_CBAJ_G0038858.1 mouse_genomes_project 5 40888746 40888875 - Gm25377 snoRNA snoRNA MGP_CBAJ_T0014890.1 MGP_CBAJ_G0013002.1 mouse_genomes_project 5 118614010 118614595 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099356.1 MGP_CBAJ_G0037611.1 mouse_genomes_project 5 74987367 74987454 + Gm23661 snRNA snRNA MGP_CBAJ_T0074875.1 MGP_CBAJ_G0029908.1 mouse_genomes_project 5 153727768 153732526 - MGP_CBAJ_P0074875 Mepce protein_coding protein_coding MGP_CBAJ_T0074876.1 MGP_CBAJ_G0029908.1 mouse_genomes_project 5 153728291 153732578 - MGP_CBAJ_P0074876 Mepce protein_coding protein_coding MGP_CBAJ_T0074877.1 MGP_CBAJ_G0029908.1 mouse_genomes_project 5 153728345 153729213 - Mepce protein_coding retained_intron MGP_CBAJ_T0074878.1 MGP_CBAJ_G0029908.1 mouse_genomes_project 5 153728992 153733518 - MGP_CBAJ_P0074878 Mepce protein_coding protein_coding MGP_CBAJ_T0074879.1 MGP_CBAJ_G0029908.1 mouse_genomes_project 5 153730748 153732554 - Mepce protein_coding processed_transcript MGP_CBAJ_T0069807.1 MGP_CBAJ_G0028961.1 mouse_genomes_project 5 14402299 14897506 + MGP_CBAJ_P0069807 Cacna2d1 protein_coding protein_coding MGP_CBAJ_T0069808.1 MGP_CBAJ_G0028961.1 mouse_genomes_project 5 14402359 14894064 + MGP_CBAJ_P0069808 Cacna2d1 protein_coding protein_coding MGP_CBAJ_T0069809.1 MGP_CBAJ_G0028961.1 mouse_genomes_project 5 14402359 14894064 + MGP_CBAJ_P0069809 Cacna2d1 protein_coding protein_coding MGP_CBAJ_T0069810.1 MGP_CBAJ_G0028961.1 mouse_genomes_project 5 14402359 14897499 + MGP_CBAJ_P0069810 Cacna2d1 protein_coding protein_coding MGP_CBAJ_T0069811.1 MGP_CBAJ_G0028961.1 mouse_genomes_project 5 14402359 14894064 + MGP_CBAJ_P0069811 Cacna2d1 protein_coding protein_coding MGP_CBAJ_T0069812.1 MGP_CBAJ_G0028961.1 mouse_genomes_project 5 14402359 14894046 + MGP_CBAJ_P0069812 Cacna2d1 protein_coding protein_coding MGP_CBAJ_T0069813.1 MGP_CBAJ_G0028961.1 mouse_genomes_project 5 14402400 14893722 + MGP_CBAJ_P0069813 Cacna2d1 protein_coding protein_coding MGP_CBAJ_T0069814.1 MGP_CBAJ_G0028961.1 mouse_genomes_project 5 14402482 14571869 + MGP_CBAJ_P0069814 Cacna2d1 protein_coding protein_coding MGP_CBAJ_T0069815.1 MGP_CBAJ_G0028961.1 mouse_genomes_project 5 14499304 14779756 + Cacna2d1 protein_coding retained_intron MGP_CBAJ_T0069816.1 MGP_CBAJ_G0028961.1 mouse_genomes_project 5 14843530 14847086 + Cacna2d1 protein_coding retained_intron MGP_CBAJ_T0069817.1 MGP_CBAJ_G0028961.1 mouse_genomes_project 5 14843690 14858095 + Cacna2d1 protein_coding retained_intron MGP_CBAJ_T0069818.1 MGP_CBAJ_G0028961.1 mouse_genomes_project 5 14884904 14885836 + Cacna2d1 protein_coding retained_intron MGP_CBAJ_T0098060.1 MGP_CBAJ_G0036333.1 mouse_genomes_project 5 100320946 100321053 - Gm24931 rRNA rRNA MGP_CBAJ_T0014715.1 MGP_CBAJ_G0012827.1 mouse_genomes_project 5 33515431 33515717 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008278.1 MGP_CBAJ_G0006711.1 mouse_genomes_project 5 141083479 141103256 - Gm42953 lincRNA lincRNA MGP_CBAJ_T0072746.1 MGP_CBAJ_G0029521.1 mouse_genomes_project 5 118956849 118958053 - MGP_CBAJ_P0072746 Atp5k protein_coding protein_coding MGP_CBAJ_T0072747.1 MGP_CBAJ_G0029521.1 mouse_genomes_project 5 118956849 118958053 - MGP_CBAJ_P0072747 Atp5k protein_coding protein_coding MGP_CBAJ_T0072748.1 MGP_CBAJ_G0029521.1 mouse_genomes_project 5 118956851 118958002 - Atp5k protein_coding retained_intron MGP_CBAJ_T0001597.1 MGP_CBAJ_G0001516.1 mouse_genomes_project 5 70064715 70068693 - TEC TEC MGP_CBAJ_T0099378.1 MGP_CBAJ_G0037633.1 mouse_genomes_project 5 109928294 109928454 - Gm23173 snRNA snRNA MGP_CBAJ_T0072539.1 MGP_CBAJ_G0029475.1 mouse_genomes_project 5 113797353 113835385 - MGP_CBAJ_P0072539 Hsd17b11 protein_coding protein_coding MGP_CBAJ_T0072540.1 MGP_CBAJ_G0029475.1 mouse_genomes_project 5 113813250 113835304 - MGP_CBAJ_P0072540 Hsd17b11 protein_coding protein_coding MGP_CBAJ_T0001785.1 MGP_CBAJ_G0001703.1 mouse_genomes_project 5 138267745 138269351 - TEC TEC MGP_CBAJ_T0075429.1 MGP_CBAJ_G0030028.1 mouse_genomes_project 5 162546098 162554434 - MGP_CBAJ_P0075429 Atp5j2 protein_coding protein_coding MGP_CBAJ_T0075430.1 MGP_CBAJ_G0030028.1 mouse_genomes_project 5 162546106 162553964 - MGP_CBAJ_P0075430 Atp5j2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075431.1 MGP_CBAJ_G0030028.1 mouse_genomes_project 5 162546109 162553964 - MGP_CBAJ_P0075431 Atp5j2 protein_coding protein_coding MGP_CBAJ_T0075432.1 MGP_CBAJ_G0030028.1 mouse_genomes_project 5 162546786 162553883 - MGP_CBAJ_P0075432 Atp5j2 protein_coding protein_coding MGP_CBAJ_T0075433.1 MGP_CBAJ_G0030028.1 mouse_genomes_project 5 162551799 162553900 - Atp5j2 protein_coding retained_intron MGP_CBAJ_T0070006.1 MGP_CBAJ_G0029003.1 mouse_genomes_project 5 23976715 23984648 - MGP_CBAJ_P0070006 Atg9b protein_coding protein_coding MGP_CBAJ_T0070007.1 MGP_CBAJ_G0029003.1 mouse_genomes_project 5 23977154 23983140 - Atg9b protein_coding processed_transcript MGP_CBAJ_T0070008.1 MGP_CBAJ_G0029003.1 mouse_genomes_project 5 23979639 23980501 - Atg9b protein_coding processed_transcript MGP_CBAJ_T0010581.1 MGP_CBAJ_G0008719.1 mouse_genomes_project 5 125080042 125080098 - Mir7230 miRNA miRNA MGP_CBAJ_T0014688.1 MGP_CBAJ_G0012800.1 mouse_genomes_project 5 23811698 23813088 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001770.1 MGP_CBAJ_G0001688.1 mouse_genomes_project 5 135984524 135984836 + TEC TEC MGP_CBAJ_T0074193.1 MGP_CBAJ_G0029788.1 mouse_genomes_project 5 143634494 143760201 + MGP_CBAJ_P0074193 Adgrd1 protein_coding protein_coding MGP_CBAJ_T0074194.1 MGP_CBAJ_G0029788.1 mouse_genomes_project 5 143634501 143641533 + Adgrd1 protein_coding retained_intron MGP_CBAJ_T0074195.1 MGP_CBAJ_G0029788.1 mouse_genomes_project 5 143634501 143759282 + MGP_CBAJ_P0074195 Adgrd1 protein_coding protein_coding MGP_CBAJ_T0014800.1 MGP_CBAJ_G0012912.1 mouse_genomes_project 5 77327574 77328345 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0072360.1 MGP_CBAJ_G0029440.1 mouse_genomes_project 5 106949754 107115897 - MGP_CBAJ_P0072360 Antxr2 protein_coding protein_coding MGP_CBAJ_T0072361.1 MGP_CBAJ_G0029440.1 mouse_genomes_project 5 106989703 107115978 - MGP_CBAJ_P0072361 Antxr2 protein_coding protein_coding MGP_CBAJ_T0072362.1 MGP_CBAJ_G0029440.1 mouse_genomes_project 5 107029543 107081404 - Antxr2 protein_coding processed_transcript MGP_CBAJ_T0071495.1 MGP_CBAJ_G0029256.1 mouse_genomes_project 5 70648178 70742752 - MGP_CBAJ_P0071495 Rbm47 protein_coding protein_coding MGP_CBAJ_T0071496.1 MGP_CBAJ_G0029256.1 mouse_genomes_project 5 70648178 70823409 - MGP_CBAJ_P0071496 Rbm47 protein_coding protein_coding MGP_CBAJ_T0071497.1 MGP_CBAJ_G0029256.1 mouse_genomes_project 5 70648185 70712862 - MGP_CBAJ_P0071497 Rbm47 protein_coding protein_coding MGP_CBAJ_T0071498.1 MGP_CBAJ_G0029256.1 mouse_genomes_project 5 70648186 70802117 - MGP_CBAJ_P0071498 Rbm47 protein_coding protein_coding MGP_CBAJ_T0071499.1 MGP_CBAJ_G0029256.1 mouse_genomes_project 5 70650232 70801271 - MGP_CBAJ_P0071499 Rbm47 protein_coding protein_coding MGP_CBAJ_T0071500.1 MGP_CBAJ_G0029256.1 mouse_genomes_project 5 70650232 70801271 - MGP_CBAJ_P0071500 Rbm47 protein_coding protein_coding MGP_CBAJ_T0071501.1 MGP_CBAJ_G0029256.1 mouse_genomes_project 5 70650611 70712961 - MGP_CBAJ_P0071501 Rbm47 protein_coding protein_coding MGP_CBAJ_T0071502.1 MGP_CBAJ_G0029256.1 mouse_genomes_project 5 70657171 70801149 - Rbm47 protein_coding retained_intron MGP_CBAJ_T0071503.1 MGP_CBAJ_G0029256.1 mouse_genomes_project 5 70658387 70686479 - MGP_CBAJ_P0071503 Rbm47 protein_coding protein_coding MGP_CBAJ_T0071504.1 MGP_CBAJ_G0029256.1 mouse_genomes_project 5 70658630 70713852 - Rbm47 protein_coding processed_transcript MGP_CBAJ_T0071505.1 MGP_CBAJ_G0029256.1 mouse_genomes_project 5 70658822 70712846 - MGP_CBAJ_P0071505 Rbm47 protein_coding protein_coding MGP_CBAJ_T0071506.1 MGP_CBAJ_G0029256.1 mouse_genomes_project 5 70658842 70801516 - MGP_CBAJ_P0071506 Rbm47 protein_coding protein_coding MGP_CBAJ_T0071507.1 MGP_CBAJ_G0029256.1 mouse_genomes_project 5 70678189 70801981 - Rbm47 protein_coding processed_transcript MGP_CBAJ_T0071508.1 MGP_CBAJ_G0029256.1 mouse_genomes_project 5 70678304 70801975 - Rbm47 protein_coding processed_transcript MGP_CBAJ_T0001514.1 MGP_CBAJ_G0001435.1 mouse_genomes_project 5 48943272 48945126 + TEC TEC MGP_CBAJ_T0008213.1 MGP_CBAJ_G0006668.1 mouse_genomes_project 5 127498468 127549555 + Gm13832 lincRNA lincRNA MGP_CBAJ_T0008214.1 MGP_CBAJ_G0006668.1 mouse_genomes_project 5 127498487 127575840 + Gm13832 lincRNA lincRNA MGP_CBAJ_T0014788.1 MGP_CBAJ_G0012900.1 mouse_genomes_project 5 68535897 68536846 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014718.1 MGP_CBAJ_G0012830.1 mouse_genomes_project 5 33860528 33860988 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001772.1 MGP_CBAJ_G0001690.1 mouse_genomes_project 5 136109182 136112069 - TEC TEC MGP_CBAJ_T0008008.1 MGP_CBAJ_G0006519.1 mouse_genomes_project 5 40820334 40981917 - 4930513D17Rik lincRNA lincRNA MGP_CBAJ_T0008009.1 MGP_CBAJ_G0006519.1 mouse_genomes_project 5 40821150 40981960 - 4930513D17Rik lincRNA lincRNA MGP_CBAJ_T0008010.1 MGP_CBAJ_G0006519.1 mouse_genomes_project 5 40842084 40981915 - 4930513D17Rik lincRNA lincRNA MGP_CBAJ_T0014982.1 MGP_CBAJ_G0013094.1 mouse_genomes_project 5 163609477 163610296 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0073520.1 MGP_CBAJ_G0029674.1 mouse_genomes_project 5 133681475 133691055 + MGP_CBAJ_P0073520 Rasal1 protein_coding protein_coding MGP_CBAJ_T0073521.1 MGP_CBAJ_G0029674.1 mouse_genomes_project 5 133681485 133724103 + MGP_CBAJ_P0073521 Rasal1 protein_coding protein_coding MGP_CBAJ_T0073522.1 MGP_CBAJ_G0029674.1 mouse_genomes_project 5 133681851 133724103 + MGP_CBAJ_P0073522 Rasal1 protein_coding protein_coding MGP_CBAJ_T0073523.1 MGP_CBAJ_G0029674.1 mouse_genomes_project 5 133689521 133695801 + Rasal1 protein_coding processed_transcript MGP_CBAJ_T0073524.1 MGP_CBAJ_G0029674.1 mouse_genomes_project 5 133723098 133723812 + Rasal1 protein_coding retained_intron MGP_CBAJ_T0001771.1 MGP_CBAJ_G0001689.1 mouse_genomes_project 5 136099964 136102164 - TEC TEC MGP_CBAJ_T0007977.1 MGP_CBAJ_G0006500.1 mouse_genomes_project 5 30333784 30340111 + Gm4961 lincRNA lincRNA MGP_CBAJ_T0008184.1 MGP_CBAJ_G0006651.1 mouse_genomes_project 5 123188581 123200056 + lincRNA lincRNA MGP_CBAJ_T0073540.1 MGP_CBAJ_G0029679.1 mouse_genomes_project 5 133905847 133927722 - MGP_CBAJ_P0073540 protein_coding protein_coding MGP_CBAJ_T0098402.1 MGP_CBAJ_G0036668.1 mouse_genomes_project 5 23142894 23143702 - Gm43566 sense_intronic sense_intronic MGP_CBAJ_T0001450.1 MGP_CBAJ_G0001373.1 mouse_genomes_project 5 31207694 31209950 + TEC TEC MGP_CBAJ_T0070958.1 MGP_CBAJ_G0029164.1 mouse_genomes_project 5 38129663 38152905 - MGP_CBAJ_P0070958 Wfs1 protein_coding protein_coding MGP_CBAJ_T0070959.1 MGP_CBAJ_G0029164.1 mouse_genomes_project 5 38129666 38152633 - MGP_CBAJ_P0070959 Wfs1 protein_coding protein_coding MGP_CBAJ_T0070960.1 MGP_CBAJ_G0029164.1 mouse_genomes_project 5 38132086 38140574 - MGP_CBAJ_P0070960 Wfs1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069825.1 MGP_CBAJ_G0028963.1 mouse_genomes_project 5 16026174 16029258 + MGP_CBAJ_P0069825 Speer4f2 protein_coding protein_coding MGP_CBAJ_T0074019.1 MGP_CBAJ_G0029757.1 mouse_genomes_project 5 138375803 138443505 - MGP_CBAJ_P0074019 Sbno1 protein_coding protein_coding MGP_CBAJ_T0074020.1 MGP_CBAJ_G0029757.1 mouse_genomes_project 5 138375809 138440094 - MGP_CBAJ_P0074020 Sbno1 protein_coding protein_coding MGP_CBAJ_T0074021.1 MGP_CBAJ_G0029757.1 mouse_genomes_project 5 138381634 138429031 - MGP_CBAJ_P0074021 Sbno1 protein_coding protein_coding MGP_CBAJ_T0074022.1 MGP_CBAJ_G0029757.1 mouse_genomes_project 5 138383184 138394620 - Sbno1 protein_coding retained_intron MGP_CBAJ_T0074023.1 MGP_CBAJ_G0029757.1 mouse_genomes_project 5 138398475 138399487 - Sbno1 protein_coding retained_intron MGP_CBAJ_T0074024.1 MGP_CBAJ_G0029757.1 mouse_genomes_project 5 138402790 138403442 - Sbno1 protein_coding retained_intron MGP_CBAJ_T0074025.1 MGP_CBAJ_G0029757.1 mouse_genomes_project 5 138403438 138404950 - Sbno1 protein_coding retained_intron MGP_CBAJ_T0074026.1 MGP_CBAJ_G0029757.1 mouse_genomes_project 5 138405485 138440077 - MGP_CBAJ_P0074026 Sbno1 protein_coding protein_coding MGP_CBAJ_T0074027.1 MGP_CBAJ_G0029757.1 mouse_genomes_project 5 138405501 138408786 - Sbno1 protein_coding retained_intron MGP_CBAJ_T0074028.1 MGP_CBAJ_G0029757.1 mouse_genomes_project 5 138405503 138443592 - MGP_CBAJ_P0074028 Sbno1 protein_coding protein_coding MGP_CBAJ_T0074029.1 MGP_CBAJ_G0029757.1 mouse_genomes_project 5 138408451 138409650 - Sbno1 protein_coding retained_intron MGP_CBAJ_T0074030.1 MGP_CBAJ_G0029757.1 mouse_genomes_project 5 138408451 138443548 - MGP_CBAJ_P0074030 Sbno1 protein_coding protein_coding MGP_CBAJ_T0074031.1 MGP_CBAJ_G0029757.1 mouse_genomes_project 5 138411133 138440076 - MGP_CBAJ_P0074031 Sbno1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074032.1 MGP_CBAJ_G0029757.1 mouse_genomes_project 5 138412506 138418255 - MGP_CBAJ_P0074032 Sbno1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074033.1 MGP_CBAJ_G0029757.1 mouse_genomes_project 5 138419627 138440068 - MGP_CBAJ_P0074033 Sbno1 protein_coding protein_coding MGP_CBAJ_T0074034.1 MGP_CBAJ_G0029757.1 mouse_genomes_project 5 138424629 138440052 - MGP_CBAJ_P0074034 Sbno1 protein_coding protein_coding MGP_CBAJ_T0074035.1 MGP_CBAJ_G0029757.1 mouse_genomes_project 5 138424861 138434392 - MGP_CBAJ_P0074035 Sbno1 protein_coding protein_coding MGP_CBAJ_T0074036.1 MGP_CBAJ_G0029757.1 mouse_genomes_project 5 138438007 138440027 - Sbno1 protein_coding retained_intron MGP_CBAJ_T0071356.1 MGP_CBAJ_G0029233.1 mouse_genomes_project 5 68212931 68277368 - MGP_CBAJ_P0071356 Rell1 protein_coding protein_coding MGP_CBAJ_T0071357.1 MGP_CBAJ_G0029233.1 mouse_genomes_project 5 68213100 68277294 - MGP_CBAJ_P0071357 Rell1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071358.1 MGP_CBAJ_G0029233.1 mouse_genomes_project 5 68228531 68234480 - Rell1 protein_coding processed_transcript MGP_CBAJ_T0071359.1 MGP_CBAJ_G0029233.1 mouse_genomes_project 5 68230786 68234343 - Rell1 protein_coding retained_intron MGP_CBAJ_T0071360.1 MGP_CBAJ_G0029233.1 mouse_genomes_project 5 68266642 68277310 - Rell1 protein_coding processed_transcript MGP_CBAJ_T0101954.1 MGP_CBAJ_G0039985.1 mouse_genomes_project 5 152714266 152716169 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0073471.1 MGP_CBAJ_G0029662.1 mouse_genomes_project 5 132753103 132761170 + MGP_CBAJ_P0073471 Tbx5 protein_coding protein_coding MGP_CBAJ_T0073472.1 MGP_CBAJ_G0029662.1 mouse_genomes_project 5 132755085 132816830 + MGP_CBAJ_P0073472 Tbx5 protein_coding protein_coding MGP_CBAJ_T0073473.1 MGP_CBAJ_G0029662.1 mouse_genomes_project 5 132756442 132768371 + MGP_CBAJ_P0073473 Tbx5 protein_coding protein_coding MGP_CBAJ_T0099347.1 MGP_CBAJ_G0037602.1 mouse_genomes_project 5 40003190 40003297 - Gm22779 snRNA snRNA MGP_CBAJ_T0008215.1 MGP_CBAJ_G0006669.1 mouse_genomes_project 5 127818327 127819095 - 1110006O24Rik lincRNA lincRNA MGP_CBAJ_T0074991.1 MGP_CBAJ_G0029937.1 mouse_genomes_project 5 154947731 154965594 - MGP_CBAJ_P0074991 Zfp68 protein_coding protein_coding MGP_CBAJ_T0074992.1 MGP_CBAJ_G0029937.1 mouse_genomes_project 5 154949079 154965591 - MGP_CBAJ_P0074992 Zfp68 protein_coding protein_coding MGP_CBAJ_T0074993.1 MGP_CBAJ_G0029937.1 mouse_genomes_project 5 154950213 154951155 - Zfp68 protein_coding processed_transcript MGP_CBAJ_T0074994.1 MGP_CBAJ_G0029937.1 mouse_genomes_project 5 154950217 154965573 - MGP_CBAJ_P0074994 Zfp68 protein_coding protein_coding MGP_CBAJ_T0074995.1 MGP_CBAJ_G0029937.1 mouse_genomes_project 5 154957893 154965486 - MGP_CBAJ_P0074995 Zfp68 protein_coding protein_coding MGP_CBAJ_T0074996.1 MGP_CBAJ_G0029937.1 mouse_genomes_project 5 154962011 154965571 - Zfp68 protein_coding retained_intron MGP_CBAJ_T0100627.1 MGP_CBAJ_G0038882.1 mouse_genomes_project 5 107703809 107703940 + Gm24279 snoRNA snoRNA MGP_CBAJ_T0001494.1 MGP_CBAJ_G0001415.1 mouse_genomes_project 5 46097893 46101351 - TEC TEC MGP_CBAJ_T0074447.1 MGP_CBAJ_G0029827.1 mouse_genomes_project 5 150006760 150029215 - protein_coding retained_intron MGP_CBAJ_T0074448.1 MGP_CBAJ_G0029827.1 mouse_genomes_project 5 150006760 150055588 - MGP_CBAJ_P0074448 protein_coding unknown_likely_coding MGP_CBAJ_T0074449.1 MGP_CBAJ_G0029827.1 mouse_genomes_project 5 150006760 150050962 - MGP_CBAJ_P0074449 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074450.1 MGP_CBAJ_G0029827.1 mouse_genomes_project 5 150029517 150033021 - protein_coding retained_intron MGP_CBAJ_T0074451.1 MGP_CBAJ_G0029827.1 mouse_genomes_project 5 150048437 150050969 - protein_coding retained_intron MGP_CBAJ_T0074132.1 MGP_CBAJ_G0029773.1 mouse_genomes_project 5 139497512 139498908 - MGP_CBAJ_P0074132 protein_coding protein_coding MGP_CBAJ_T0098395.1 MGP_CBAJ_G0036661.1 mouse_genomes_project 5 1087918 1089807 + Gm43031 sense_intronic sense_intronic MGP_CBAJ_T0072196.1 MGP_CBAJ_G0029408.1 mouse_genomes_project 5 100127072 100145173 - Rchy1 protein_coding processed_transcript MGP_CBAJ_T0072197.1 MGP_CBAJ_G0029408.1 mouse_genomes_project 5 100127072 100145685 - MGP_CBAJ_P0072197 Rchy1 protein_coding protein_coding MGP_CBAJ_T0072198.1 MGP_CBAJ_G0029408.1 mouse_genomes_project 5 100127169 100145352 - MGP_CBAJ_P0072198 Rchy1 protein_coding protein_coding MGP_CBAJ_T0072199.1 MGP_CBAJ_G0029408.1 mouse_genomes_project 5 100130380 100132281 - Rchy1 protein_coding retained_intron MGP_CBAJ_T0072200.1 MGP_CBAJ_G0029408.1 mouse_genomes_project 5 100144298 100145343 - Rchy1 protein_coding retained_intron MGP_CBAJ_T0001638.1 MGP_CBAJ_G0001557.1 mouse_genomes_project 5 74302706 74304831 - TEC TEC MGP_CBAJ_T0070999.1 MGP_CBAJ_G0029170.1 mouse_genomes_project 5 38927585 38935588 + MGP_CBAJ_P0070999 Cytl1 protein_coding protein_coding MGP_CBAJ_T0071000.1 MGP_CBAJ_G0029170.1 mouse_genomes_project 5 38933082 38935583 + Cytl1 protein_coding retained_intron MGP_CBAJ_T0071792.1 MGP_CBAJ_G0029306.1 mouse_genomes_project 5 80899052 80929944 + MGP_CBAJ_P0071792 Pdgfra protein_coding protein_coding MGP_CBAJ_T0071793.1 MGP_CBAJ_G0029306.1 mouse_genomes_project 5 80899066 80944561 + MGP_CBAJ_P0071793 Pdgfra protein_coding protein_coding MGP_CBAJ_T0071794.1 MGP_CBAJ_G0029306.1 mouse_genomes_project 5 80899112 80921734 + MGP_CBAJ_P0071794 Pdgfra protein_coding non_stop_decay MGP_CBAJ_T0071795.1 MGP_CBAJ_G0029306.1 mouse_genomes_project 5 80899690 80930557 + MGP_CBAJ_P0071795 Pdgfra protein_coding protein_coding MGP_CBAJ_T0071796.1 MGP_CBAJ_G0029306.1 mouse_genomes_project 5 80900342 80909290 + Pdgfra protein_coding retained_intron MGP_CBAJ_T0071797.1 MGP_CBAJ_G0029306.1 mouse_genomes_project 5 80901825 80910320 + MGP_CBAJ_P0071797 Pdgfra protein_coding protein_coding MGP_CBAJ_T0071798.1 MGP_CBAJ_G0029306.1 mouse_genomes_project 5 80902611 80944547 + MGP_CBAJ_P0071798 Pdgfra protein_coding protein_coding MGP_CBAJ_T0071799.1 MGP_CBAJ_G0029306.1 mouse_genomes_project 5 80903538 80913123 + MGP_CBAJ_P0071799 Pdgfra protein_coding protein_coding MGP_CBAJ_T0071800.1 MGP_CBAJ_G0029306.1 mouse_genomes_project 5 80908403 80914500 + MGP_CBAJ_P0071800 Pdgfra protein_coding protein_coding MGP_CBAJ_T0072755.1 MGP_CBAJ_G0029524.1 mouse_genomes_project 5 119045504 119080564 - MGP_CBAJ_P0072755 Cplx1 protein_coding protein_coding MGP_CBAJ_T0072756.1 MGP_CBAJ_G0029524.1 mouse_genomes_project 5 119047208 119080540 - MGP_CBAJ_P0072756 Cplx1 protein_coding protein_coding MGP_CBAJ_T0075046.1 MGP_CBAJ_G0029945.1 mouse_genomes_project 5 155696536 155713416 + MGP_CBAJ_P0075046 Get4 protein_coding protein_coding MGP_CBAJ_T0075047.1 MGP_CBAJ_G0029945.1 mouse_genomes_project 5 155696582 155711351 + MGP_CBAJ_P0075047 Get4 protein_coding protein_coding MGP_CBAJ_T0075048.1 MGP_CBAJ_G0029945.1 mouse_genomes_project 5 155711076 155711648 + Get4 protein_coding retained_intron MGP_CBAJ_T0001600.1 MGP_CBAJ_G0001519.1 mouse_genomes_project 5 70183245 70186088 + TEC TEC MGP_CBAJ_T0073593.1 MGP_CBAJ_G0029693.1 mouse_genomes_project 5 134872840 134877934 - MGP_CBAJ_P0073593 protein_coding protein_coding MGP_CBAJ_T0071753.1 MGP_CBAJ_G0029300.1 mouse_genomes_project 5 79821125 79825361 + MGP_CBAJ_P0071753 Rasl11b protein_coding protein_coding MGP_CBAJ_T0071754.1 MGP_CBAJ_G0029300.1 mouse_genomes_project 5 79821284 79822130 + Rasl11b protein_coding retained_intron MGP_CBAJ_T0071755.1 MGP_CBAJ_G0029300.1 mouse_genomes_project 5 79823772 79825352 + Rasl11b protein_coding retained_intron MGP_CBAJ_T0072996.1 MGP_CBAJ_G0029572.1 mouse_genomes_project 5 123973779 124150121 - MGP_CBAJ_P0072996 Sez6l protein_coding protein_coding MGP_CBAJ_T0072997.1 MGP_CBAJ_G0029572.1 mouse_genomes_project 5 123973784 124150228 - MGP_CBAJ_P0072997 Sez6l protein_coding protein_coding MGP_CBAJ_T0072998.1 MGP_CBAJ_G0029572.1 mouse_genomes_project 5 123973793 124150438 - MGP_CBAJ_P0072998 Sez6l protein_coding protein_coding MGP_CBAJ_T0072999.1 MGP_CBAJ_G0029572.1 mouse_genomes_project 5 123976447 124150430 - MGP_CBAJ_P0072999 Sez6l protein_coding protein_coding MGP_CBAJ_T0070919.1 MGP_CBAJ_G0029157.1 mouse_genomes_project 5 37610048 37613635 + MGP_CBAJ_P0070919 Ccdc96 protein_coding protein_coding MGP_CBAJ_T0072080.1 MGP_CBAJ_G0029372.1 mouse_genomes_project 5 96026460 96038827 + MGP_CBAJ_P0072080 Prol1 protein_coding protein_coding MGP_CBAJ_T0101960.1 MGP_CBAJ_G0039991.1 mouse_genomes_project 5 163482385 163488822 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0072917.1 MGP_CBAJ_G0029556.1 mouse_genomes_project 5 122127937 122134870 - MGP_CBAJ_P0072917 Pus1 protein_coding protein_coding MGP_CBAJ_T0072918.1 MGP_CBAJ_G0029556.1 mouse_genomes_project 5 122127937 122134241 - MGP_CBAJ_P0072918 Pus1 protein_coding protein_coding MGP_CBAJ_T0072919.1 MGP_CBAJ_G0029556.1 mouse_genomes_project 5 122127937 122134870 - MGP_CBAJ_P0072919 Pus1 protein_coding protein_coding MGP_CBAJ_T0072920.1 MGP_CBAJ_G0029556.1 mouse_genomes_project 5 122127937 122134933 - MGP_CBAJ_P0072920 Pus1 protein_coding protein_coding MGP_CBAJ_T0072921.1 MGP_CBAJ_G0029556.1 mouse_genomes_project 5 122127938 122134889 - MGP_CBAJ_P0072921 Pus1 protein_coding protein_coding MGP_CBAJ_T0072922.1 MGP_CBAJ_G0029556.1 mouse_genomes_project 5 122129806 122134420 - MGP_CBAJ_P0072922 Pus1 protein_coding protein_coding MGP_CBAJ_T0072923.1 MGP_CBAJ_G0029556.1 mouse_genomes_project 5 122129815 122134865 - MGP_CBAJ_P0072923 Pus1 protein_coding protein_coding MGP_CBAJ_T0075189.1 MGP_CBAJ_G0029979.1 mouse_genomes_project 5 159395917 159462561 - MGP_CBAJ_P0075189 Radil protein_coding protein_coding MGP_CBAJ_T0075190.1 MGP_CBAJ_G0029979.1 mouse_genomes_project 5 159395922 159469689 - Radil protein_coding retained_intron MGP_CBAJ_T0075191.1 MGP_CBAJ_G0029979.1 mouse_genomes_project 5 159395922 159463650 - MGP_CBAJ_P0075191 Radil protein_coding protein_coding MGP_CBAJ_T0075192.1 MGP_CBAJ_G0029979.1 mouse_genomes_project 5 159395959 159469704 - MGP_CBAJ_P0075192 Radil protein_coding protein_coding MGP_CBAJ_T0075193.1 MGP_CBAJ_G0029979.1 mouse_genomes_project 5 159397563 159398650 - Radil protein_coding retained_intron MGP_CBAJ_T0075194.1 MGP_CBAJ_G0029979.1 mouse_genomes_project 5 159418940 159420315 - MGP_CBAJ_P0075194 Radil protein_coding protein_coding MGP_CBAJ_T0075196.1 MGP_CBAJ_G0029979.1 mouse_genomes_project 5 159462239 159469592 - MGP_CBAJ_P0075196 Radil protein_coding protein_coding MGP_CBAJ_T0070783.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35558417 35561969 - MGP_CBAJ_P0070783 Mfsd10 protein_coding protein_coding MGP_CBAJ_T0070784.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35558421 35561992 - MGP_CBAJ_P0070784 Mfsd10 protein_coding protein_coding MGP_CBAJ_T0070785.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35558422 35559503 - Mfsd10 protein_coding retained_intron MGP_CBAJ_T0070786.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35558423 35559405 - Mfsd10 protein_coding retained_intron MGP_CBAJ_T0070787.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35558424 35561972 - MGP_CBAJ_P0070787 Mfsd10 protein_coding protein_coding MGP_CBAJ_T0070788.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35558500 35561583 - MGP_CBAJ_P0070788 Mfsd10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070789.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35558690 35559667 - Mfsd10 protein_coding retained_intron MGP_CBAJ_T0070790.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35558770 35560900 - Mfsd10 protein_coding retained_intron MGP_CBAJ_T0070791.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35559089 35560301 - MGP_CBAJ_P0070791 Mfsd10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070792.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35559406 35559841 - MGP_CBAJ_P0070792 Mfsd10 protein_coding protein_coding MGP_CBAJ_T0070793.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35559430 35560892 - MGP_CBAJ_P0070793 Mfsd10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070794.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35559626 35560531 - MGP_CBAJ_P0070794 Mfsd10 protein_coding protein_coding MGP_CBAJ_T0070795.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35559707 35561969 - MGP_CBAJ_P0070795 Mfsd10 protein_coding protein_coding MGP_CBAJ_T0070796.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35559832 35561617 - MGP_CBAJ_P0070796 Mfsd10 protein_coding protein_coding MGP_CBAJ_T0070797.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35559839 35560399 - MGP_CBAJ_P0070797 Mfsd10 protein_coding protein_coding MGP_CBAJ_T0070798.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35559863 35560277 - Mfsd10 protein_coding retained_intron MGP_CBAJ_T0070799.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35559885 35561905 - MGP_CBAJ_P0070799 Mfsd10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070800.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35560161 35561298 - Mfsd10 protein_coding processed_transcript MGP_CBAJ_T0070801.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35560388 35561311 - Mfsd10 protein_coding processed_transcript MGP_CBAJ_T0070802.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35560804 35561836 - Mfsd10 protein_coding retained_intron MGP_CBAJ_T0070803.1 MGP_CBAJ_G0029135.1 mouse_genomes_project 5 35561369 35561920 - MGP_CBAJ_P0070803 Mfsd10 protein_coding protein_coding MGP_CBAJ_T0008072.1 MGP_CBAJ_G0006571.1 mouse_genomes_project 5 81619739 81622342 - Gm19590 lincRNA lincRNA MGP_CBAJ_T0008243.1 MGP_CBAJ_G0006692.1 mouse_genomes_project 5 132887283 132891425 + Gm43277 lincRNA lincRNA MGP_CBAJ_T0073568.1 MGP_CBAJ_G0029688.1 mouse_genomes_project 5 134689427 134703994 - MGP_CBAJ_P0073568 Trafd1 protein_coding protein_coding MGP_CBAJ_T0073569.1 MGP_CBAJ_G0029688.1 mouse_genomes_project 5 134689431 134690838 - Trafd1 protein_coding retained_intron MGP_CBAJ_T0073570.1 MGP_CBAJ_G0029688.1 mouse_genomes_project 5 134689431 134698680 - MGP_CBAJ_P0073570 Trafd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073571.1 MGP_CBAJ_G0029688.1 mouse_genomes_project 5 134689438 134691181 - MGP_CBAJ_P0073571 Trafd1 protein_coding protein_coding MGP_CBAJ_T0073572.1 MGP_CBAJ_G0029688.1 mouse_genomes_project 5 134698487 134705266 - MGP_CBAJ_P0073572 Trafd1 protein_coding protein_coding MGP_CBAJ_T0073573.1 MGP_CBAJ_G0029688.1 mouse_genomes_project 5 134704017 134705217 - Trafd1 protein_coding processed_transcript MGP_CBAJ_T0098056.1 MGP_CBAJ_G0036329.1 mouse_genomes_project 5 56326873 56326983 + Gm26486 rRNA rRNA MGP_CBAJ_T0007948.1 MGP_CBAJ_G0006484.1 mouse_genomes_project 5 21840484 21848214 + lincRNA lincRNA MGP_CBAJ_T0007949.1 MGP_CBAJ_G0006484.1 mouse_genomes_project 5 21840491 22160513 + lincRNA lincRNA MGP_CBAJ_T0007950.1 MGP_CBAJ_G0006484.1 mouse_genomes_project 5 21843958 21847407 + lincRNA lincRNA MGP_CBAJ_T0072065.1 MGP_CBAJ_G0029363.1 mouse_genomes_project 5 95470065 95480181 + MGP_CBAJ_P0072065 Csn3 protein_coding protein_coding MGP_CBAJ_T0072066.1 MGP_CBAJ_G0029363.1 mouse_genomes_project 5 95470093 95477289 + MGP_CBAJ_P0072066 Csn3 protein_coding protein_coding MGP_CBAJ_T0072067.1 MGP_CBAJ_G0029363.1 mouse_genomes_project 5 95470098 95475726 + Csn3 protein_coding retained_intron MGP_CBAJ_T0072068.1 MGP_CBAJ_G0029363.1 mouse_genomes_project 5 95470113 95475726 + Csn3 protein_coding retained_intron MGP_CBAJ_T0072069.1 MGP_CBAJ_G0029363.1 mouse_genomes_project 5 95470121 95479781 + MGP_CBAJ_P0072069 Csn3 protein_coding protein_coding MGP_CBAJ_T0072070.1 MGP_CBAJ_G0029363.1 mouse_genomes_project 5 95474282 95476412 + Csn3 protein_coding retained_intron MGP_CBAJ_T0073204.1 MGP_CBAJ_G0029611.1 mouse_genomes_project 5 126798313 126800372 - MGP_CBAJ_P0073204 2610524H06Rik protein_coding protein_coding MGP_CBAJ_T0101929.1 MGP_CBAJ_G0039960.1 mouse_genomes_project 5 14226203 14227236 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0070629.1 MGP_CBAJ_G0029112.1 mouse_genomes_project 5 34134931 34167482 + Uvssa protein_coding retained_intron MGP_CBAJ_T0070630.1 MGP_CBAJ_G0029112.1 mouse_genomes_project 5 34135078 34176789 + MGP_CBAJ_P0070630 Uvssa protein_coding nonsense_mediated_decay MGP_CBAJ_T0070631.1 MGP_CBAJ_G0029112.1 mouse_genomes_project 5 34135078 34176789 + MGP_CBAJ_P0070631 Uvssa protein_coding protein_coding MGP_CBAJ_T0070632.1 MGP_CBAJ_G0029112.1 mouse_genomes_project 5 34135154 34176789 + MGP_CBAJ_P0070632 Uvssa protein_coding protein_coding MGP_CBAJ_T0004810.1 MGP_CBAJ_G0004129.1 mouse_genomes_project 5 167546892 167552009 - Gm19719 antisense antisense MGP_CBAJ_T0004644.1 MGP_CBAJ_G0004016.1 mouse_genomes_project 5 95371473 95374999 - Gm42794 antisense antisense MGP_CBAJ_T0008371.1 MGP_CBAJ_G0006779.1 mouse_genomes_project 5 168981277 168983669 - Gm5 lincRNA lincRNA MGP_CBAJ_T0008372.1 MGP_CBAJ_G0006779.1 mouse_genomes_project 5 168981345 168983840 - Gm5 lincRNA lincRNA MGP_CBAJ_T0010611.1 MGP_CBAJ_G0008749.1 mouse_genomes_project 5 156324566 156324631 - Mir7037 miRNA miRNA MGP_CBAJ_T0099373.1 MGP_CBAJ_G0037628.1 mouse_genomes_project 5 100565781 100565900 + Gm23031 snRNA snRNA MGP_CBAJ_T0014861.1 MGP_CBAJ_G0012973.1 mouse_genomes_project 5 107604061 107604442 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007936.1 MGP_CBAJ_G0006473.1 mouse_genomes_project 5 2846814 2849962 + lincRNA lincRNA MGP_CBAJ_T0071598.1 MGP_CBAJ_G0029269.1 mouse_genomes_project 5 72871383 73018203 + MGP_CBAJ_P0071598 Grxcr1 protein_coding protein_coding MGP_CBAJ_T0101427.1 MGP_CBAJ_G0039468.1 mouse_genomes_project 5 100145005 100148967 + unitary_pseudogene retained_intron MGP_CBAJ_T0101428.1 MGP_CBAJ_G0039468.1 mouse_genomes_project 5 100145506 100152005 + unitary_pseudogene processed_transcript MGP_CBAJ_T0101429.1 MGP_CBAJ_G0039468.1 mouse_genomes_project 5 100145520 100152924 + unitary_pseudogene processed_transcript MGP_CBAJ_T0101430.1 MGP_CBAJ_G0039468.1 mouse_genomes_project 5 100145949 100154416 + unitary_pseudogene unitary_pseudogene MGP_CBAJ_T0069967.1 MGP_CBAJ_G0028995.1 mouse_genomes_project 5 23212030 23265537 - MGP_CBAJ_P0069967 Pus7 protein_coding protein_coding MGP_CBAJ_T0069968.1 MGP_CBAJ_G0028995.1 mouse_genomes_project 5 23212031 23265379 - MGP_CBAJ_P0069968 Pus7 protein_coding protein_coding MGP_CBAJ_T0069969.1 MGP_CBAJ_G0028995.1 mouse_genomes_project 5 23212038 23261422 - MGP_CBAJ_P0069969 Pus7 protein_coding protein_coding MGP_CBAJ_T0069970.1 MGP_CBAJ_G0028995.1 mouse_genomes_project 5 23213222 23260331 - MGP_CBAJ_P0069970 Pus7 protein_coding unknown_likely_coding MGP_CBAJ_T0069971.1 MGP_CBAJ_G0028995.1 mouse_genomes_project 5 23213747 23221495 - Pus7 protein_coding processed_transcript MGP_CBAJ_T0069972.1 MGP_CBAJ_G0028995.1 mouse_genomes_project 5 23214804 23234321 - MGP_CBAJ_P0069972 Pus7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069973.1 MGP_CBAJ_G0028995.1 mouse_genomes_project 5 23220760 23234358 - Pus7 protein_coding processed_transcript MGP_CBAJ_T0069974.1 MGP_CBAJ_G0028995.1 mouse_genomes_project 5 23221913 23226560 - Pus7 protein_coding processed_transcript MGP_CBAJ_T0069975.1 MGP_CBAJ_G0028995.1 mouse_genomes_project 5 23232265 23260242 - MGP_CBAJ_P0069975 Pus7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069976.1 MGP_CBAJ_G0028995.1 mouse_genomes_project 5 23254414 23257532 - Pus7 protein_coding retained_intron MGP_CBAJ_T0001750.1 MGP_CBAJ_G0001668.1 mouse_genomes_project 5 131259206 131260553 - TEC TEC MGP_CBAJ_T0014774.1 MGP_CBAJ_G0012886.1 mouse_genomes_project 5 64031357 64031991 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014660.1 MGP_CBAJ_G0012772.1 mouse_genomes_project 5 18107179 18107420 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0069568.1 MGP_CBAJ_G0028924.1 mouse_genomes_project 5 602055 611848 - MGP_CBAJ_P0069568 Gatad1 protein_coding protein_coding MGP_CBAJ_T0069572.1 MGP_CBAJ_G0028924.1 mouse_genomes_project 5 611698 617928 - MGP_CBAJ_P0069572 Gatad1 protein_coding protein_coding MGP_CBAJ_T0069573.1 MGP_CBAJ_G0028924.1 mouse_genomes_project 5 613385 618115 - MGP_CBAJ_P0069573 Gatad1 protein_coding protein_coding MGP_CBAJ_T0075000.1 MGP_CBAJ_G0029939.1 mouse_genomes_project 5 155110128 155173598 + MGP_CBAJ_P0075000 Fam20c protein_coding protein_coding MGP_CBAJ_T0075001.1 MGP_CBAJ_G0029939.1 mouse_genomes_project 5 155110697 155172902 + MGP_CBAJ_P0075001 Fam20c protein_coding nonsense_mediated_decay MGP_CBAJ_T0075002.1 MGP_CBAJ_G0029939.1 mouse_genomes_project 5 155110701 155114464 + Fam20c protein_coding retained_intron MGP_CBAJ_T0075003.1 MGP_CBAJ_G0029939.1 mouse_genomes_project 5 155144716 155172680 + Fam20c protein_coding processed_transcript MGP_CBAJ_T0075004.1 MGP_CBAJ_G0029939.1 mouse_genomes_project 5 155146990 155167634 + Fam20c protein_coding processed_transcript MGP_CBAJ_T0075005.1 MGP_CBAJ_G0029939.1 mouse_genomes_project 5 155167484 155172926 + Fam20c protein_coding retained_intron MGP_CBAJ_T0070719.1 MGP_CBAJ_G0029126.1 mouse_genomes_project 5 35003082 35025630 - MGP_CBAJ_P0070719 Haus3 protein_coding protein_coding MGP_CBAJ_T0070720.1 MGP_CBAJ_G0029126.1 mouse_genomes_project 5 35016124 35025551 - Haus3 protein_coding retained_intron MGP_CBAJ_T0070721.1 MGP_CBAJ_G0029126.1 mouse_genomes_project 5 35016361 35017190 - Haus3 protein_coding processed_transcript MGP_CBAJ_T0070722.1 MGP_CBAJ_G0029126.1 mouse_genomes_project 5 35024035 35025555 - Haus3 protein_coding processed_transcript MGP_CBAJ_T0070723.1 MGP_CBAJ_G0029126.1 mouse_genomes_project 5 35024127 35025606 - MGP_CBAJ_P0070723 Haus3 protein_coding protein_coding MGP_CBAJ_T0070724.1 MGP_CBAJ_G0029126.1 mouse_genomes_project 5 35024340 35025536 - MGP_CBAJ_P0070724 Haus3 protein_coding protein_coding MGP_CBAJ_T0099398.1 MGP_CBAJ_G0037653.1 mouse_genomes_project 5 140610297 140610404 - Gm23151 snRNA snRNA MGP_CBAJ_T0075645.1 MGP_CBAJ_G0030080.1 mouse_genomes_project 5 168021711 168136278 + MGP_CBAJ_P0075645 B3glct protein_coding protein_coding MGP_CBAJ_T0075646.1 MGP_CBAJ_G0030080.1 mouse_genomes_project 5 168102271 168120669 + B3glct protein_coding processed_transcript MGP_CBAJ_T0075647.1 MGP_CBAJ_G0030080.1 mouse_genomes_project 5 168127526 168134286 + B3glct protein_coding retained_intron MGP_CBAJ_T0075453.1 MGP_CBAJ_G0030034.1 mouse_genomes_project 5 162825860 162862090 - MGP_CBAJ_P0075453 Cyp3a16 protein_coding protein_coding MGP_CBAJ_T0008304.1 MGP_CBAJ_G0006727.1 mouse_genomes_project 5 149273629 149274426 - Gm15627 lincRNA lincRNA MGP_CBAJ_T0004757.1 MGP_CBAJ_G0004092.1 mouse_genomes_project 5 139129841 139133360 + Gm42839 antisense antisense MGP_CBAJ_T0072076.1 MGP_CBAJ_G0029368.1 mouse_genomes_project 5 95686231 95710632 + MGP_CBAJ_P0072076 Smr2 protein_coding protein_coding MGP_CBAJ_T0074731.1 MGP_CBAJ_G0029883.1 mouse_genomes_project 5 153035337 153038951 - MGP_CBAJ_P0074731 protein_coding protein_coding MGP_CBAJ_T0074732.1 MGP_CBAJ_G0029883.1 mouse_genomes_project 5 153036564 153043068 - MGP_CBAJ_P0074732 protein_coding protein_coding MGP_CBAJ_T0001490.1 MGP_CBAJ_G0001411.1 mouse_genomes_project 5 45633803 45635875 - TEC TEC MGP_CBAJ_T0008261.1 MGP_CBAJ_G0006702.1 mouse_genomes_project 5 138078792 138079948 - Gm16001 lincRNA lincRNA MGP_CBAJ_T0008262.1 MGP_CBAJ_G0006702.1 mouse_genomes_project 5 138078821 138079901 - Gm16001 lincRNA lincRNA MGP_CBAJ_T0074138.1 MGP_CBAJ_G0029776.1 mouse_genomes_project 5 139556660 139575455 + MGP_CBAJ_P0074138 Bri3bp protein_coding protein_coding MGP_CBAJ_T0074139.1 MGP_CBAJ_G0029776.1 mouse_genomes_project 5 139556842 139569811 + MGP_CBAJ_P0074139 Bri3bp protein_coding protein_coding MGP_CBAJ_T0008039.1 MGP_CBAJ_G0006546.1 mouse_genomes_project 5 64903521 64908232 - 1700014F14Rik lincRNA lincRNA MGP_CBAJ_T0098054.1 MGP_CBAJ_G0036327.1 mouse_genomes_project 5 55985534 55985613 + n-R5s171 rRNA rRNA MGP_CBAJ_T0070881.1 MGP_CBAJ_G0029150.1 mouse_genomes_project 5 36750019 36782005 - MGP_CBAJ_P0070881 Sh3tc1 protein_coding protein_coding MGP_CBAJ_T0070882.1 MGP_CBAJ_G0029150.1 mouse_genomes_project 5 36750020 36776675 - MGP_CBAJ_P0070882 Sh3tc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070883.1 MGP_CBAJ_G0029150.1 mouse_genomes_project 5 36750022 36768980 - MGP_CBAJ_P0070883 Sh3tc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070884.1 MGP_CBAJ_G0029150.1 mouse_genomes_project 5 36750022 36792716 - MGP_CBAJ_P0070884 Sh3tc1 protein_coding protein_coding MGP_CBAJ_T0070885.1 MGP_CBAJ_G0029150.1 mouse_genomes_project 5 36750024 36771967 - Sh3tc1 protein_coding retained_intron MGP_CBAJ_T0070886.1 MGP_CBAJ_G0029150.1 mouse_genomes_project 5 36750150 36776772 - MGP_CBAJ_P0070886 Sh3tc1 protein_coding protein_coding MGP_CBAJ_T0070887.1 MGP_CBAJ_G0029150.1 mouse_genomes_project 5 36775796 36781741 - Sh3tc1 protein_coding processed_transcript MGP_CBAJ_T0070381.1 MGP_CBAJ_G0029075.1 mouse_genomes_project 5 31454494 31460175 + MGP_CBAJ_P0070381 Dnajc5g protein_coding nonsense_mediated_decay MGP_CBAJ_T0070382.1 MGP_CBAJ_G0029075.1 mouse_genomes_project 5 31456497 31459930 + MGP_CBAJ_P0070382 Dnajc5g protein_coding protein_coding MGP_CBAJ_T0070383.1 MGP_CBAJ_G0029075.1 mouse_genomes_project 5 31456507 31460034 + MGP_CBAJ_P0070383 Dnajc5g protein_coding nonsense_mediated_decay MGP_CBAJ_T0070384.1 MGP_CBAJ_G0029075.1 mouse_genomes_project 5 31456509 31460717 + MGP_CBAJ_P0070384 Dnajc5g protein_coding protein_coding MGP_CBAJ_T0014837.1 MGP_CBAJ_G0012949.1 mouse_genomes_project 5 95647913 95648292 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100645.1 MGP_CBAJ_G0038900.1 mouse_genomes_project 5 167376553 167376651 + Gm23362 snoRNA snoRNA MGP_CBAJ_T0072287.1 MGP_CBAJ_G0029424.1 mouse_genomes_project 5 100919901 100924077 - Ccdc158 protein_coding retained_intron MGP_CBAJ_T0072288.1 MGP_CBAJ_G0029424.1 mouse_genomes_project 5 100920200 101002332 - MGP_CBAJ_P0072288 Ccdc158 protein_coding protein_coding MGP_CBAJ_T0072289.1 MGP_CBAJ_G0029424.1 mouse_genomes_project 5 100973921 101002472 - MGP_CBAJ_P0072289 Ccdc158 protein_coding protein_coding MGP_CBAJ_T0072290.1 MGP_CBAJ_G0029424.1 mouse_genomes_project 5 100973921 101002478 - MGP_CBAJ_P0072290 Ccdc158 protein_coding protein_coding MGP_CBAJ_T0074004.1 MGP_CBAJ_G0029754.1 mouse_genomes_project 5 138241866 138324635 - MGP_CBAJ_P0074004 Mphosph9 protein_coding protein_coding MGP_CBAJ_T0074005.1 MGP_CBAJ_G0029754.1 mouse_genomes_project 5 138243576 138324512 - MGP_CBAJ_P0074005 Mphosph9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074006.1 MGP_CBAJ_G0029754.1 mouse_genomes_project 5 138244576 138324515 - MGP_CBAJ_P0074006 Mphosph9 protein_coding protein_coding MGP_CBAJ_T0074007.1 MGP_CBAJ_G0029754.1 mouse_genomes_project 5 138245528 138252009 - Mphosph9 protein_coding processed_transcript MGP_CBAJ_T0074008.1 MGP_CBAJ_G0029754.1 mouse_genomes_project 5 138249901 138256228 - Mphosph9 protein_coding processed_transcript MGP_CBAJ_T0074009.1 MGP_CBAJ_G0029754.1 mouse_genomes_project 5 138251845 138253914 - Mphosph9 protein_coding processed_transcript MGP_CBAJ_T0074010.1 MGP_CBAJ_G0029754.1 mouse_genomes_project 5 138252846 138254285 - Mphosph9 protein_coding retained_intron MGP_CBAJ_T0074011.1 MGP_CBAJ_G0029754.1 mouse_genomes_project 5 138280398 138324533 - MGP_CBAJ_P0074011 Mphosph9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074012.1 MGP_CBAJ_G0029754.1 mouse_genomes_project 5 138290718 138321790 - MGP_CBAJ_P0074012 Mphosph9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074013.1 MGP_CBAJ_G0029754.1 mouse_genomes_project 5 138309341 138324635 - Mphosph9 protein_coding processed_transcript MGP_CBAJ_T0074014.1 MGP_CBAJ_G0029754.1 mouse_genomes_project 5 138309341 138324515 - Mphosph9 protein_coding processed_transcript MGP_CBAJ_T0101125.1 MGP_CBAJ_G0039320.1 mouse_genomes_project 5 24296272 24301067 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101126.1 MGP_CBAJ_G0039320.1 mouse_genomes_project 5 24299890 24300941 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0071003.1 MGP_CBAJ_G0029172.1 mouse_genomes_project 5 39299468 39398319 + MGP_CBAJ_P0071003 Stx18 protein_coding protein_coding MGP_CBAJ_T0071004.1 MGP_CBAJ_G0029172.1 mouse_genomes_project 5 39299486 39398325 + MGP_CBAJ_P0071004 Stx18 protein_coding protein_coding MGP_CBAJ_T0071005.1 MGP_CBAJ_G0029172.1 mouse_genomes_project 5 39299514 39398329 + MGP_CBAJ_P0071005 Stx18 protein_coding protein_coding MGP_CBAJ_T0071006.1 MGP_CBAJ_G0029172.1 mouse_genomes_project 5 39299517 39379562 + MGP_CBAJ_P0071006 Stx18 protein_coding protein_coding MGP_CBAJ_T0071007.1 MGP_CBAJ_G0029172.1 mouse_genomes_project 5 39340087 39393927 + MGP_CBAJ_P0071007 Stx18 protein_coding protein_coding MGP_CBAJ_T0071008.1 MGP_CBAJ_G0029172.1 mouse_genomes_project 5 39374428 39387139 + Stx18 protein_coding processed_transcript MGP_CBAJ_T0071009.1 MGP_CBAJ_G0029172.1 mouse_genomes_project 5 39386748 39393953 + Stx18 protein_coding retained_intron MGP_CBAJ_T0071712.1 MGP_CBAJ_G0029292.1 mouse_genomes_project 5 78784562 78805495 + MGP_CBAJ_P0071712 Ociad1 protein_coding protein_coding MGP_CBAJ_T0071713.1 MGP_CBAJ_G0029292.1 mouse_genomes_project 5 78784570 78805607 + MGP_CBAJ_P0071713 Ociad1 protein_coding protein_coding MGP_CBAJ_T0071714.1 MGP_CBAJ_G0029292.1 mouse_genomes_project 5 78784571 78801133 + MGP_CBAJ_P0071714 Ociad1 protein_coding protein_coding MGP_CBAJ_T0071715.1 MGP_CBAJ_G0029292.1 mouse_genomes_project 5 78784585 78798548 + MGP_CBAJ_P0071715 Ociad1 protein_coding protein_coding MGP_CBAJ_T0071716.1 MGP_CBAJ_G0029292.1 mouse_genomes_project 5 78784610 78805452 + MGP_CBAJ_P0071716 Ociad1 protein_coding protein_coding MGP_CBAJ_T0071717.1 MGP_CBAJ_G0029292.1 mouse_genomes_project 5 78784619 78802184 + MGP_CBAJ_P0071717 Ociad1 protein_coding protein_coding MGP_CBAJ_T0071718.1 MGP_CBAJ_G0029292.1 mouse_genomes_project 5 78784673 78805479 + MGP_CBAJ_P0071718 Ociad1 protein_coding protein_coding MGP_CBAJ_T0071719.1 MGP_CBAJ_G0029292.1 mouse_genomes_project 5 78784831 78786745 + MGP_CBAJ_P0071719 Ociad1 protein_coding protein_coding MGP_CBAJ_T0071720.1 MGP_CBAJ_G0029292.1 mouse_genomes_project 5 78786768 78805479 + MGP_CBAJ_P0071720 Ociad1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071721.1 MGP_CBAJ_G0029292.1 mouse_genomes_project 5 78795889 78796922 + Ociad1 protein_coding retained_intron MGP_CBAJ_T0069679.1 MGP_CBAJ_G0028940.1 mouse_genomes_project 5 4856912 4857285 + 4921511H03Rik protein_coding processed_transcript MGP_CBAJ_T0069680.1 MGP_CBAJ_G0028940.1 mouse_genomes_project 5 4856918 4864290 + MGP_CBAJ_P0069680 4921511H03Rik protein_coding protein_coding MGP_CBAJ_T0069681.1 MGP_CBAJ_G0028940.1 mouse_genomes_project 5 4856925 4860367 + MGP_CBAJ_P0069681 4921511H03Rik protein_coding protein_coding MGP_CBAJ_T0069682.1 MGP_CBAJ_G0028940.1 mouse_genomes_project 5 4856939 4858603 + MGP_CBAJ_P0069682 4921511H03Rik protein_coding protein_coding MGP_CBAJ_T0074984.1 MGP_CBAJ_G0029935.1 mouse_genomes_project 5 154766134 154788892 + MGP_CBAJ_P0074984 Zfp157 protein_coding protein_coding MGP_CBAJ_T0074985.1 MGP_CBAJ_G0029935.1 mouse_genomes_project 5 154766145 154776425 + Zfp157 protein_coding retained_intron MGP_CBAJ_T0074986.1 MGP_CBAJ_G0029935.1 mouse_genomes_project 5 154766173 154775501 + Zfp157 protein_coding retained_intron MGP_CBAJ_T0074987.1 MGP_CBAJ_G0029935.1 mouse_genomes_project 5 154766177 154776469 + Zfp157 protein_coding retained_intron MGP_CBAJ_T0074988.1 MGP_CBAJ_G0029935.1 mouse_genomes_project 5 154766185 154784563 + MGP_CBAJ_P0074988 Zfp157 protein_coding protein_coding MGP_CBAJ_T0074989.1 MGP_CBAJ_G0029935.1 mouse_genomes_project 5 154766206 154784575 + MGP_CBAJ_P0074989 Zfp157 protein_coding protein_coding MGP_CBAJ_T0072636.1 MGP_CBAJ_G0029499.1 mouse_genomes_project 5 117242827 117262928 + MGP_CBAJ_P0072636 Cdc7 protein_coding protein_coding MGP_CBAJ_T0072637.1 MGP_CBAJ_G0029499.1 mouse_genomes_project 5 117242827 117262929 + MGP_CBAJ_P0072637 Cdc7 protein_coding protein_coding MGP_CBAJ_T0072638.1 MGP_CBAJ_G0029499.1 mouse_genomes_project 5 117242886 117262929 + MGP_CBAJ_P0072638 Cdc7 protein_coding protein_coding MGP_CBAJ_T0072639.1 MGP_CBAJ_G0029499.1 mouse_genomes_project 5 117242897 117262929 + Cdc7 protein_coding retained_intron MGP_CBAJ_T0072640.1 MGP_CBAJ_G0029499.1 mouse_genomes_project 5 117243066 117262928 + MGP_CBAJ_P0072640 Cdc7 protein_coding protein_coding MGP_CBAJ_T0072641.1 MGP_CBAJ_G0029499.1 mouse_genomes_project 5 117243523 117261852 + MGP_CBAJ_P0072641 Cdc7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072642.1 MGP_CBAJ_G0029499.1 mouse_genomes_project 5 117253049 117253696 + Cdc7 protein_coding processed_transcript MGP_CBAJ_T0072643.1 MGP_CBAJ_G0029499.1 mouse_genomes_project 5 117253741 117257839 + Cdc7 protein_coding retained_intron MGP_CBAJ_T0014984.1 MGP_CBAJ_G0013096.1 mouse_genomes_project 5 163916547 163917419 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001866.1 MGP_CBAJ_G0001782.1 mouse_genomes_project 5 166257898 166258583 + TEC TEC MGP_CBAJ_T0075330.1 MGP_CBAJ_G0030008.1 mouse_genomes_project 5 161050902 161061896 + MGP_CBAJ_P0075330 Gm42421 protein_coding protein_coding MGP_CBAJ_T0074153.1 MGP_CBAJ_G0029780.1 mouse_genomes_project 5 141963376 141986857 - MGP_CBAJ_P0074153 Slc15a4 protein_coding protein_coding MGP_CBAJ_T0074154.1 MGP_CBAJ_G0029780.1 mouse_genomes_project 5 141963379 141986667 - MGP_CBAJ_P0074154 Slc15a4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074155.1 MGP_CBAJ_G0029780.1 mouse_genomes_project 5 141963379 141986859 - MGP_CBAJ_P0074155 Slc15a4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074156.1 MGP_CBAJ_G0029780.1 mouse_genomes_project 5 141964368 141974122 - MGP_CBAJ_P0074156 Slc15a4 protein_coding protein_coding MGP_CBAJ_T0074157.1 MGP_CBAJ_G0029780.1 mouse_genomes_project 5 141971372 142002106 - MGP_CBAJ_P0074157 Slc15a4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074158.1 MGP_CBAJ_G0029780.1 mouse_genomes_project 5 141973223 141974049 - Slc15a4 protein_coding processed_transcript MGP_CBAJ_T0074159.1 MGP_CBAJ_G0029780.1 mouse_genomes_project 5 141973223 141974049 - Slc15a4 protein_coding processed_transcript MGP_CBAJ_T0074160.1 MGP_CBAJ_G0029780.1 mouse_genomes_project 5 141973249 141978794 - MGP_CBAJ_P0074160 Slc15a4 protein_coding protein_coding MGP_CBAJ_T0074161.1 MGP_CBAJ_G0029780.1 mouse_genomes_project 5 141974047 141986324 - Slc15a4 protein_coding processed_transcript MGP_CBAJ_T0074162.1 MGP_CBAJ_G0029780.1 mouse_genomes_project 5 141978235 142002123 - MGP_CBAJ_P0074162 Slc15a4 protein_coding protein_coding MGP_CBAJ_T0074163.1 MGP_CBAJ_G0029780.1 mouse_genomes_project 5 141983889 141986822 - Slc15a4 protein_coding retained_intron MGP_CBAJ_T0001552.1 MGP_CBAJ_G0001472.1 mouse_genomes_project 5 54580909 54587244 - TEC TEC MGP_CBAJ_T0001631.1 MGP_CBAJ_G0001550.1 mouse_genomes_project 5 72815846 72819522 + TEC TEC MGP_CBAJ_T0075494.1 MGP_CBAJ_G0030052.1 mouse_genomes_project 5 164506554 164562042 - MGP_CBAJ_P0075494 Usp12 protein_coding protein_coding MGP_CBAJ_T0075495.1 MGP_CBAJ_G0030052.1 mouse_genomes_project 5 164512106 164523748 - Usp12 protein_coding processed_transcript MGP_CBAJ_T0072493.1 MGP_CBAJ_G0029467.1 mouse_genomes_project 5 112141243 112595475 + MGP_CBAJ_P0072493 Arhgap24 protein_coding protein_coding MGP_CBAJ_T0072494.1 MGP_CBAJ_G0029467.1 mouse_genomes_project 5 112141243 112595474 + MGP_CBAJ_P0072494 Arhgap24 protein_coding protein_coding MGP_CBAJ_T0072495.1 MGP_CBAJ_G0029467.1 mouse_genomes_project 5 112141382 112353936 + Arhgap24 protein_coding retained_intron MGP_CBAJ_T0072496.1 MGP_CBAJ_G0029467.1 mouse_genomes_project 5 112350150 112595475 + MGP_CBAJ_P0072496 Arhgap24 protein_coding protein_coding MGP_CBAJ_T0072497.1 MGP_CBAJ_G0029467.1 mouse_genomes_project 5 112410255 112595475 + MGP_CBAJ_P0072497 Arhgap24 protein_coding protein_coding MGP_CBAJ_T0072498.1 MGP_CBAJ_G0029467.1 mouse_genomes_project 5 112461826 112595475 + MGP_CBAJ_P0072498 Arhgap24 protein_coding protein_coding MGP_CBAJ_T0072499.1 MGP_CBAJ_G0029467.1 mouse_genomes_project 5 112505812 112572459 + Arhgap24 protein_coding processed_transcript MGP_CBAJ_T0072500.1 MGP_CBAJ_G0029467.1 mouse_genomes_project 5 112541658 112595475 + MGP_CBAJ_P0072500 Arhgap24 protein_coding protein_coding MGP_CBAJ_T0001606.1 MGP_CBAJ_G0001525.1 mouse_genomes_project 5 70467041 70467749 + TEC TEC MGP_CBAJ_T0001833.1 MGP_CBAJ_G0001750.1 mouse_genomes_project 5 147540495 147541321 - TEC TEC MGP_CBAJ_T0014645.1 MGP_CBAJ_G0012757.1 mouse_genomes_project 5 8558767 8559236 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0073950.1 MGP_CBAJ_G0029743.1 mouse_genomes_project 5 137773223 137775150 - MGP_CBAJ_P0073950 Hcar2 protein_coding protein_coding MGP_CBAJ_T0008381.1 MGP_CBAJ_G0006786.1 mouse_genomes_project 5 169953713 170016546 - D730045B01Rik lincRNA lincRNA MGP_CBAJ_T0008382.1 MGP_CBAJ_G0006786.1 mouse_genomes_project 5 169954857 169955166 - D730045B01Rik lincRNA lincRNA MGP_CBAJ_T0072584.1 MGP_CBAJ_G0029492.1 mouse_genomes_project 5 115605635 115721689 + MGP_CBAJ_P0072584 Lrrc8c protein_coding protein_coding MGP_CBAJ_T0072585.1 MGP_CBAJ_G0029492.1 mouse_genomes_project 5 115605663 115686470 + MGP_CBAJ_P0072585 Lrrc8c protein_coding protein_coding MGP_CBAJ_T0072586.1 MGP_CBAJ_G0029492.1 mouse_genomes_project 5 115605720 115632960 + Lrrc8c protein_coding retained_intron MGP_CBAJ_T0072587.1 MGP_CBAJ_G0029492.1 mouse_genomes_project 5 115647348 115715513 + MGP_CBAJ_P0072587 Lrrc8c protein_coding protein_coding MGP_CBAJ_T0008135.1 MGP_CBAJ_G0006621.1 mouse_genomes_project 5 113089752 113091143 + Gm42618 lincRNA lincRNA MGP_CBAJ_T0074420.1 MGP_CBAJ_G0029823.1 mouse_genomes_project 5 149853173 149865362 + Rfc2 protein_coding processed_transcript MGP_CBAJ_T0074421.1 MGP_CBAJ_G0029823.1 mouse_genomes_project 5 149854521 149882144 + MGP_CBAJ_P0074421 Rfc2 protein_coding protein_coding MGP_CBAJ_T0074422.1 MGP_CBAJ_G0029823.1 mouse_genomes_project 5 149854588 149865799 + Rfc2 protein_coding retained_intron MGP_CBAJ_T0074423.1 MGP_CBAJ_G0029823.1 mouse_genomes_project 5 149865684 149874630 + MGP_CBAJ_P0074423 Rfc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074424.1 MGP_CBAJ_G0029823.1 mouse_genomes_project 5 149866869 149871987 + Rfc2 protein_coding retained_intron MGP_CBAJ_T0074425.1 MGP_CBAJ_G0029823.1 mouse_genomes_project 5 149870793 149875003 + Rfc2 protein_coding retained_intron MGP_CBAJ_T0004580.1 MGP_CBAJ_G0003964.1 mouse_genomes_project 5 35030102 35031103 + Gm42846 antisense antisense MGP_CBAJ_T0073708.1 MGP_CBAJ_G0029710.1 mouse_genomes_project 5 135925472 135960770 - MGP_CBAJ_P0073708 Rad9b protein_coding protein_coding MGP_CBAJ_T0073709.1 MGP_CBAJ_G0029710.1 mouse_genomes_project 5 135926006 135957904 - MGP_CBAJ_P0073709 Rad9b protein_coding protein_coding MGP_CBAJ_T0073710.1 MGP_CBAJ_G0029710.1 mouse_genomes_project 5 135926008 135960843 - MGP_CBAJ_P0073710 Rad9b protein_coding protein_coding MGP_CBAJ_T0073711.1 MGP_CBAJ_G0029710.1 mouse_genomes_project 5 135957881 135959395 - MGP_CBAJ_P0073711 Rad9b protein_coding protein_coding MGP_CBAJ_T0073712.1 MGP_CBAJ_G0029710.1 mouse_genomes_project 5 135959104 135960830 - Rad9b protein_coding retained_intron MGP_CBAJ_T0071341.1 MGP_CBAJ_G0029229.1 mouse_genomes_project 5 66759691 66769624 - Arap2 protein_coding retained_intron MGP_CBAJ_T0071342.1 MGP_CBAJ_G0029229.1 mouse_genomes_project 5 66759692 66930101 - MGP_CBAJ_P0071342 Arap2 protein_coding unknown_likely_coding MGP_CBAJ_T0071343.1 MGP_CBAJ_G0029229.1 mouse_genomes_project 5 66799779 66803459 - Arap2 protein_coding retained_intron MGP_CBAJ_T0071344.1 MGP_CBAJ_G0029229.1 mouse_genomes_project 5 66806755 66810791 - Arap2 protein_coding retained_intron MGP_CBAJ_T0071345.1 MGP_CBAJ_G0029229.1 mouse_genomes_project 5 66846931 66852445 - Arap2 protein_coding retained_intron MGP_CBAJ_T0071346.1 MGP_CBAJ_G0029229.1 mouse_genomes_project 5 66879139 66909867 - Arap2 protein_coding processed_transcript MGP_CBAJ_T0069752.1 MGP_CBAJ_G0028950.1 mouse_genomes_project 5 6642799 6683310 - MGP_CBAJ_P0069752 Crot protein_coding protein_coding MGP_CBAJ_T0069753.1 MGP_CBAJ_G0028950.1 mouse_genomes_project 5 6650387 6658939 - Crot protein_coding processed_transcript MGP_CBAJ_T0069754.1 MGP_CBAJ_G0028950.1 mouse_genomes_project 5 6662975 6683028 - Crot protein_coding retained_intron MGP_CBAJ_T0097820.1 MGP_CBAJ_G0036093.1 mouse_genomes_project 5 46978318 46978700 - pseudogene pseudogene MGP_CBAJ_T0001734.1 MGP_CBAJ_G0001652.1 mouse_genomes_project 5 125944614 125946488 + TEC TEC MGP_CBAJ_T0001857.1 MGP_CBAJ_G0001773.1 mouse_genomes_project 5 158067828 158070198 - TEC TEC MGP_CBAJ_T0001421.1 MGP_CBAJ_G0001345.1 mouse_genomes_project 5 12967625 12972874 + TEC TEC MGP_CBAJ_T0073087.1 MGP_CBAJ_G0029590.1 mouse_genomes_project 5 125719623 125786948 - MGP_CBAJ_P0073087 Ssh1 protein_coding protein_coding MGP_CBAJ_T0073088.1 MGP_CBAJ_G0029590.1 mouse_genomes_project 5 125722254 125786899 - MGP_CBAJ_P0073088 Ssh1 protein_coding protein_coding MGP_CBAJ_T0073089.1 MGP_CBAJ_G0029590.1 mouse_genomes_project 5 125724683 125782858 - MGP_CBAJ_P0073089 Ssh1 protein_coding protein_coding MGP_CBAJ_T0073090.1 MGP_CBAJ_G0029590.1 mouse_genomes_project 5 125751167 125786947 - MGP_CBAJ_P0073090 Ssh1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073091.1 MGP_CBAJ_G0029590.1 mouse_genomes_project 5 125756895 125758051 - MGP_CBAJ_P0073091 Ssh1 protein_coding protein_coding MGP_CBAJ_T0073092.1 MGP_CBAJ_G0029590.1 mouse_genomes_project 5 125757898 125786887 - Ssh1 protein_coding retained_intron MGP_CBAJ_T0008264.1 MGP_CBAJ_G0006704.1 mouse_genomes_project 5 139466236 139479269 + Gm42485 lincRNA lincRNA MGP_CBAJ_T0008378.1 MGP_CBAJ_G0006783.1 mouse_genomes_project 5 169345740 169396318 + Gm43299 lincRNA lincRNA MGP_CBAJ_T0007973.1 MGP_CBAJ_G0006497.1 mouse_genomes_project 5 29488938 29501114 + 4632411P08Rik lincRNA lincRNA MGP_CBAJ_T0072291.1 MGP_CBAJ_G0029425.1 mouse_genomes_project 5 101010644 101328904 + MGP_CBAJ_P0072291 Shroom3 protein_coding protein_coding MGP_CBAJ_T0072292.1 MGP_CBAJ_G0029425.1 mouse_genomes_project 5 101010834 101328354 + MGP_CBAJ_P0072292 Shroom3 protein_coding protein_coding MGP_CBAJ_T0072293.1 MGP_CBAJ_G0029425.1 mouse_genomes_project 5 101146825 101152872 + Shroom3 protein_coding processed_transcript MGP_CBAJ_T0072294.1 MGP_CBAJ_G0029425.1 mouse_genomes_project 5 101152853 101181617 + Shroom3 protein_coding processed_transcript MGP_CBAJ_T0072295.1 MGP_CBAJ_G0029425.1 mouse_genomes_project 5 101274877 101328169 + MGP_CBAJ_P0072295 Shroom3 protein_coding protein_coding MGP_CBAJ_T0072296.1 MGP_CBAJ_G0029425.1 mouse_genomes_project 5 101286352 101304030 + MGP_CBAJ_P0072296 Shroom3 protein_coding protein_coding MGP_CBAJ_T0072297.1 MGP_CBAJ_G0029425.1 mouse_genomes_project 5 101302199 101305822 + Shroom3 protein_coding retained_intron MGP_CBAJ_T0072298.1 MGP_CBAJ_G0029425.1 mouse_genomes_project 5 101311449 101312360 + Shroom3 protein_coding retained_intron MGP_CBAJ_T0072299.1 MGP_CBAJ_G0029425.1 mouse_genomes_project 5 101325671 101328382 + Shroom3 protein_coding retained_intron MGP_CBAJ_T0073485.1 MGP_CBAJ_G0029665.1 mouse_genomes_project 5 133457956 133479552 - MGP_CBAJ_P0073485 Sdsl protein_coding protein_coding MGP_CBAJ_T0073486.1 MGP_CBAJ_G0029665.1 mouse_genomes_project 5 133457972 133479599 - MGP_CBAJ_P0073486 Sdsl protein_coding protein_coding MGP_CBAJ_T0073487.1 MGP_CBAJ_G0029665.1 mouse_genomes_project 5 133465655 133474144 - MGP_CBAJ_P0073487 Sdsl protein_coding protein_coding MGP_CBAJ_T0014974.1 MGP_CBAJ_G0013086.1 mouse_genomes_project 5 162644202 162644701 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0075259.1 MGP_CBAJ_G0029993.1 mouse_genomes_project 5 160348249 160372227 - MGP_CBAJ_P0075259 Zfp316 protein_coding protein_coding MGP_CBAJ_T0075260.1 MGP_CBAJ_G0029993.1 mouse_genomes_project 5 160348841 160354751 - Zfp316 protein_coding retained_intron MGP_CBAJ_T0075261.1 MGP_CBAJ_G0029993.1 mouse_genomes_project 5 160351759 160366905 - MGP_CBAJ_P0075261 Zfp316 protein_coding protein_coding MGP_CBAJ_T0014964.1 MGP_CBAJ_G0013076.1 mouse_genomes_project 5 159562266 159562495 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0072924.1 MGP_CBAJ_G0029557.1 mouse_genomes_project 5 122138768 122167548 - MGP_CBAJ_P0072924 Ulk1 protein_coding protein_coding MGP_CBAJ_T0072925.1 MGP_CBAJ_G0029557.1 mouse_genomes_project 5 122141436 122143382 - MGP_CBAJ_P0072925 Ulk1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072926.1 MGP_CBAJ_G0029557.1 mouse_genomes_project 5 122141458 122144490 - MGP_CBAJ_P0072926 Ulk1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072927.1 MGP_CBAJ_G0029557.1 mouse_genomes_project 5 122141475 122142658 - Ulk1 protein_coding retained_intron MGP_CBAJ_T0072928.1 MGP_CBAJ_G0029557.1 mouse_genomes_project 5 122141530 122167504 - MGP_CBAJ_P0072928 Ulk1 protein_coding protein_coding MGP_CBAJ_T0072929.1 MGP_CBAJ_G0029557.1 mouse_genomes_project 5 122143327 122144104 - Ulk1 protein_coding retained_intron MGP_CBAJ_T0072930.1 MGP_CBAJ_G0029557.1 mouse_genomes_project 5 122143693 122144903 - Ulk1 protein_coding retained_intron MGP_CBAJ_T0072931.1 MGP_CBAJ_G0029557.1 mouse_genomes_project 5 122146836 122147631 - Ulk1 protein_coding retained_intron MGP_CBAJ_T0072932.1 MGP_CBAJ_G0029557.1 mouse_genomes_project 5 122147111 122148845 - Ulk1 protein_coding retained_intron MGP_CBAJ_T0072933.1 MGP_CBAJ_G0029557.1 mouse_genomes_project 5 122147834 122151236 - Ulk1 protein_coding processed_transcript MGP_CBAJ_T0072934.1 MGP_CBAJ_G0029557.1 mouse_genomes_project 5 122149040 122151273 - Ulk1 protein_coding retained_intron MGP_CBAJ_T0071318.1 MGP_CBAJ_G0029224.1 mouse_genomes_project 5 56665473 56676106 - MGP_CBAJ_P0071318 Cckar protein_coding protein_coding MGP_CBAJ_T0071319.1 MGP_CBAJ_G0029224.1 mouse_genomes_project 5 56675096 56676309 - Cckar protein_coding processed_transcript MGP_CBAJ_T0001793.1 MGP_CBAJ_G0001710.1 mouse_genomes_project 5 141324842 141328233 + TEC TEC MGP_CBAJ_T0008257.1 MGP_CBAJ_G0006698.1 mouse_genomes_project 5 136879766 136885628 + lincRNA lincRNA MGP_CBAJ_T0072981.1 MGP_CBAJ_G0029569.1 mouse_genomes_project 5 123895886 123933216 + MGP_CBAJ_P0072981 Hps4 protein_coding protein_coding MGP_CBAJ_T0072982.1 MGP_CBAJ_G0029569.1 mouse_genomes_project 5 123895896 123897553 + Hps4 protein_coding processed_transcript MGP_CBAJ_T0072983.1 MGP_CBAJ_G0029569.1 mouse_genomes_project 5 123895898 123933216 + Hps4 protein_coding retained_intron MGP_CBAJ_T0072984.1 MGP_CBAJ_G0029569.1 mouse_genomes_project 5 123895898 123933216 + MGP_CBAJ_P0072984 Hps4 protein_coding protein_coding MGP_CBAJ_T0072985.1 MGP_CBAJ_G0029569.1 mouse_genomes_project 5 123895903 123897693 + Hps4 protein_coding processed_transcript MGP_CBAJ_T0072987.1 MGP_CBAJ_G0029569.1 mouse_genomes_project 5 123923542 123924572 + Hps4 protein_coding retained_intron MGP_CBAJ_T0072988.1 MGP_CBAJ_G0029569.1 mouse_genomes_project 5 123930138 123933203 + Hps4 protein_coding retained_intron MGP_CBAJ_T0008198.1 MGP_CBAJ_G0006658.1 mouse_genomes_project 5 124155905 124156639 + Gm27004 lincRNA lincRNA MGP_CBAJ_T0072134.1 MGP_CBAJ_G0029388.1 mouse_genomes_project 5 98194109 98347351 - MGP_CBAJ_P0072134 Ankrd17 protein_coding protein_coding MGP_CBAJ_T0072135.1 MGP_CBAJ_G0029388.1 mouse_genomes_project 5 98194762 98199407 - Ankrd17 protein_coding retained_intron MGP_CBAJ_T0072136.1 MGP_CBAJ_G0029388.1 mouse_genomes_project 5 98195240 98347351 - MGP_CBAJ_P0072136 Ankrd17 protein_coding protein_coding MGP_CBAJ_T0072137.1 MGP_CBAJ_G0029388.1 mouse_genomes_project 5 98195408 98347106 - MGP_CBAJ_P0072137 Ankrd17 protein_coding protein_coding MGP_CBAJ_T0072138.1 MGP_CBAJ_G0029388.1 mouse_genomes_project 5 98195684 98319232 - MGP_CBAJ_P0072138 Ankrd17 protein_coding protein_coding MGP_CBAJ_T0072139.1 MGP_CBAJ_G0029388.1 mouse_genomes_project 5 98196225 98346925 - MGP_CBAJ_P0072139 Ankrd17 protein_coding unknown_likely_coding MGP_CBAJ_T0072140.1 MGP_CBAJ_G0029388.1 mouse_genomes_project 5 98205654 98208929 - Ankrd17 protein_coding retained_intron MGP_CBAJ_T0072141.1 MGP_CBAJ_G0029388.1 mouse_genomes_project 5 98224604 98280797 - Ankrd17 protein_coding retained_intron MGP_CBAJ_T0072142.1 MGP_CBAJ_G0029388.1 mouse_genomes_project 5 98225248 98237201 - Ankrd17 protein_coding retained_intron MGP_CBAJ_T0072143.1 MGP_CBAJ_G0029388.1 mouse_genomes_project 5 98233884 98240412 - Ankrd17 protein_coding retained_intron MGP_CBAJ_T0072144.1 MGP_CBAJ_G0029388.1 mouse_genomes_project 5 98240946 98252186 - Ankrd17 protein_coding retained_intron MGP_CBAJ_T0072145.1 MGP_CBAJ_G0029388.1 mouse_genomes_project 5 98253035 98255212 - Ankrd17 protein_coding retained_intron MGP_CBAJ_T0072146.1 MGP_CBAJ_G0029388.1 mouse_genomes_project 5 98268929 98271771 - Ankrd17 protein_coding retained_intron MGP_CBAJ_T0072147.1 MGP_CBAJ_G0029388.1 mouse_genomes_project 5 98344971 98347063 - Ankrd17 protein_coding retained_intron MGP_CBAJ_T0014812.1 MGP_CBAJ_G0012924.1 mouse_genomes_project 5 81867129 81867481 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0072374.1 MGP_CBAJ_G0029446.1 mouse_genomes_project 5 108118426 108229773 - MGP_CBAJ_P0072374 Prkg2 protein_coding protein_coding MGP_CBAJ_T0072375.1 MGP_CBAJ_G0029446.1 mouse_genomes_project 5 108119910 108133587 - MGP_CBAJ_P0072375 Prkg2 protein_coding protein_coding MGP_CBAJ_T0072376.1 MGP_CBAJ_G0029446.1 mouse_genomes_project 5 108119910 108133585 - MGP_CBAJ_P0072376 Prkg2 protein_coding protein_coding MGP_CBAJ_T0072377.1 MGP_CBAJ_G0029446.1 mouse_genomes_project 5 108120362 108229457 - MGP_CBAJ_P0072377 Prkg2 protein_coding protein_coding MGP_CBAJ_T0072378.1 MGP_CBAJ_G0029446.1 mouse_genomes_project 5 108137133 108156250 - Prkg2 protein_coding retained_intron MGP_CBAJ_T0070491.1 MGP_CBAJ_G0029090.1 mouse_genomes_project 5 31684120 31738377 + MGP_CBAJ_P0070491 Gckr protein_coding protein_coding MGP_CBAJ_T0070492.1 MGP_CBAJ_G0029090.1 mouse_genomes_project 5 31684231 31738358 + Gckr protein_coding retained_intron MGP_CBAJ_T0070493.1 MGP_CBAJ_G0029090.1 mouse_genomes_project 5 31684258 31738365 + MGP_CBAJ_P0070493 Gckr protein_coding protein_coding MGP_CBAJ_T0070494.1 MGP_CBAJ_G0029090.1 mouse_genomes_project 5 31684289 31687261 + MGP_CBAJ_P0070494 Gckr protein_coding protein_coding MGP_CBAJ_T0070495.1 MGP_CBAJ_G0029090.1 mouse_genomes_project 5 31685381 31693255 + Gckr protein_coding retained_intron MGP_CBAJ_T0070496.1 MGP_CBAJ_G0029090.1 mouse_genomes_project 5 31686186 31692161 + Gckr protein_coding retained_intron MGP_CBAJ_T0070497.1 MGP_CBAJ_G0029090.1 mouse_genomes_project 5 31737293 31738360 + Gckr protein_coding retained_intron MGP_CBAJ_T0001789.1 MGP_CBAJ_G0001706.1 mouse_genomes_project 5 138561790 138563154 + TEC TEC MGP_CBAJ_T0071643.1 MGP_CBAJ_G0029280.1 mouse_genomes_project 5 77603029 77844273 - MGP_CBAJ_P0071643 Corin protein_coding protein_coding MGP_CBAJ_T0071644.1 MGP_CBAJ_G0029280.1 mouse_genomes_project 5 77603030 77844008 - MGP_CBAJ_P0071644 Corin protein_coding protein_coding MGP_CBAJ_T0071645.1 MGP_CBAJ_G0029280.1 mouse_genomes_project 5 77604490 77844233 - MGP_CBAJ_P0071645 Corin protein_coding protein_coding MGP_CBAJ_T0071646.1 MGP_CBAJ_G0029280.1 mouse_genomes_project 5 77604490 77844239 - MGP_CBAJ_P0071646 Corin protein_coding protein_coding MGP_CBAJ_T0071647.1 MGP_CBAJ_G0029280.1 mouse_genomes_project 5 77604502 77844239 - MGP_CBAJ_P0071647 Corin protein_coding protein_coding MGP_CBAJ_T0071648.1 MGP_CBAJ_G0029280.1 mouse_genomes_project 5 77660538 77667658 - Corin protein_coding retained_intron MGP_CBAJ_T0071649.1 MGP_CBAJ_G0029280.1 mouse_genomes_project 5 77665342 77690857 - Corin protein_coding processed_transcript MGP_CBAJ_T0008353.1 MGP_CBAJ_G0006768.1 mouse_genomes_project 5 167333752 167423469 - 5730422E09Rik lincRNA lincRNA MGP_CBAJ_T0008354.1 MGP_CBAJ_G0006768.1 mouse_genomes_project 5 167333756 167337600 - 5730422E09Rik lincRNA lincRNA MGP_CBAJ_T0001840.1 MGP_CBAJ_G0001756.1 mouse_genomes_project 5 149731689 149735956 - TEC TEC MGP_CBAJ_T0071145.1 MGP_CBAJ_G0029198.1 mouse_genomes_project 5 46058717 46110710 - MGP_CBAJ_P0071145 Tapt1 protein_coding protein_coding MGP_CBAJ_T0071146.1 MGP_CBAJ_G0029198.1 mouse_genomes_project 5 46058722 46110705 - MGP_CBAJ_P0071146 Tapt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071147.1 MGP_CBAJ_G0029198.1 mouse_genomes_project 5 46060059 46066380 - Tapt1 protein_coding retained_intron MGP_CBAJ_T0071148.1 MGP_CBAJ_G0029198.1 mouse_genomes_project 5 46067786 46075638 - Tapt1 protein_coding retained_intron MGP_CBAJ_T0071149.1 MGP_CBAJ_G0029198.1 mouse_genomes_project 5 46072235 46102304 - MGP_CBAJ_P0071149 Tapt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071150.1 MGP_CBAJ_G0029198.1 mouse_genomes_project 5 46072250 46088434 - Tapt1 protein_coding retained_intron MGP_CBAJ_T0071151.1 MGP_CBAJ_G0029198.1 mouse_genomes_project 5 46075914 46088604 - Tapt1 protein_coding retained_intron MGP_CBAJ_T0071152.1 MGP_CBAJ_G0029198.1 mouse_genomes_project 5 46101920 46110714 - Tapt1 protein_coding retained_intron MGP_CBAJ_T0072547.1 MGP_CBAJ_G0029477.1 mouse_genomes_project 5 113894013 113901487 - MGP_CBAJ_P0072547 Gm17660 protein_coding protein_coding MGP_CBAJ_T0072548.1 MGP_CBAJ_G0029477.1 mouse_genomes_project 5 113894039 113901471 - MGP_CBAJ_P0072548 Gm17660 protein_coding protein_coding MGP_CBAJ_T0072549.1 MGP_CBAJ_G0029477.1 mouse_genomes_project 5 113895197 113901487 - MGP_CBAJ_P0072549 Gm17660 protein_coding protein_coding MGP_CBAJ_T0014949.1 MGP_CBAJ_G0013061.1 mouse_genomes_project 5 153860042 153860430 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0070709.1 MGP_CBAJ_G0029125.1 mouse_genomes_project 5 34828753 34839155 - Poln protein_coding processed_transcript MGP_CBAJ_T0070710.1 MGP_CBAJ_G0029125.1 mouse_genomes_project 5 34828763 34878216 - Poln protein_coding processed_transcript MGP_CBAJ_T0070711.1 MGP_CBAJ_G0029125.1 mouse_genomes_project 5 34828772 35025551 - MGP_CBAJ_P0070711 Poln protein_coding protein_coding MGP_CBAJ_T0070712.1 MGP_CBAJ_G0029125.1 mouse_genomes_project 5 34828772 35025551 - MGP_CBAJ_P0070712 Poln protein_coding protein_coding MGP_CBAJ_T0070713.1 MGP_CBAJ_G0029125.1 mouse_genomes_project 5 34828857 35025529 - MGP_CBAJ_P0070713 Poln protein_coding protein_coding MGP_CBAJ_T0070714.1 MGP_CBAJ_G0029125.1 mouse_genomes_project 5 34829003 34997749 - MGP_CBAJ_P0070714 Poln protein_coding unknown_likely_coding MGP_CBAJ_T0070715.1 MGP_CBAJ_G0029125.1 mouse_genomes_project 5 34829003 34997749 - MGP_CBAJ_P0070715 Poln protein_coding unknown_likely_coding MGP_CBAJ_T0070716.1 MGP_CBAJ_G0029125.1 mouse_genomes_project 5 34839945 34941446 - Poln protein_coding processed_transcript MGP_CBAJ_T0070717.1 MGP_CBAJ_G0029125.1 mouse_genomes_project 5 34859294 34941390 - Poln protein_coding processed_transcript MGP_CBAJ_T0070718.1 MGP_CBAJ_G0029125.1 mouse_genomes_project 5 34937295 34941462 - Poln protein_coding retained_intron MGP_CBAJ_T0070748.1 MGP_CBAJ_G0029131.1 mouse_genomes_project 5 35247451 35382922 + MGP_CBAJ_P0070748 Fam193a protein_coding protein_coding MGP_CBAJ_T0070749.1 MGP_CBAJ_G0029131.1 mouse_genomes_project 5 35302934 35382213 + MGP_CBAJ_P0070749 Fam193a protein_coding unknown_likely_coding MGP_CBAJ_T0070750.1 MGP_CBAJ_G0029131.1 mouse_genomes_project 5 35320341 35382213 + MGP_CBAJ_P0070750 Fam193a protein_coding protein_coding MGP_CBAJ_T0070751.1 MGP_CBAJ_G0029131.1 mouse_genomes_project 5 35325304 35337706 + MGP_CBAJ_P0070751 Fam193a protein_coding protein_coding MGP_CBAJ_T0070752.1 MGP_CBAJ_G0029131.1 mouse_genomes_project 5 35337799 35354318 + MGP_CBAJ_P0070752 Fam193a protein_coding protein_coding MGP_CBAJ_T0070753.1 MGP_CBAJ_G0029131.1 mouse_genomes_project 5 35361395 35373022 + MGP_CBAJ_P0070753 Fam193a protein_coding protein_coding MGP_CBAJ_T0010562.1 MGP_CBAJ_G0008700.1 mouse_genomes_project 5 71812441 71812555 - Gm23841 miRNA miRNA MGP_CBAJ_T0075707.1 MGP_CBAJ_G0030088.1 mouse_genomes_project 5 169500509 169550145 + MGP_CBAJ_P0075707 Kl protein_coding protein_coding MGP_CBAJ_T0075708.1 MGP_CBAJ_G0030088.1 mouse_genomes_project 5 169500606 169543308 + Kl protein_coding retained_intron MGP_CBAJ_T0074470.1 MGP_CBAJ_G0029834.1 mouse_genomes_project 5 150395516 150435923 + MGP_CBAJ_P0074470 Stx1a protein_coding protein_coding MGP_CBAJ_T0074471.1 MGP_CBAJ_G0029834.1 mouse_genomes_project 5 150395541 150427557 + MGP_CBAJ_P0074471 Stx1a protein_coding protein_coding MGP_CBAJ_T0074472.1 MGP_CBAJ_G0029834.1 mouse_genomes_project 5 150395594 150435923 + MGP_CBAJ_P0074472 Stx1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0074473.1 MGP_CBAJ_G0029834.1 mouse_genomes_project 5 150416517 150430755 + Stx1a protein_coding processed_transcript MGP_CBAJ_T0074474.1 MGP_CBAJ_G0029834.1 mouse_genomes_project 5 150420066 150435922 + Stx1a protein_coding retained_intron MGP_CBAJ_T0074475.1 MGP_CBAJ_G0029834.1 mouse_genomes_project 5 150420272 150430864 + Stx1a protein_coding processed_transcript MGP_CBAJ_T0072944.1 MGP_CBAJ_G0029560.1 mouse_genomes_project 5 122248736 122683434 + MGP_CBAJ_P0072944 Ttc28 protein_coding protein_coding MGP_CBAJ_T0072945.1 MGP_CBAJ_G0029560.1 mouse_genomes_project 5 122248736 122683433 + MGP_CBAJ_P0072945 Ttc28 protein_coding protein_coding MGP_CBAJ_T0072946.1 MGP_CBAJ_G0029560.1 mouse_genomes_project 5 122248755 122284844 + Ttc28 protein_coding processed_transcript MGP_CBAJ_T0072947.1 MGP_CBAJ_G0029560.1 mouse_genomes_project 5 122614436 122618385 + Ttc28 protein_coding retained_intron MGP_CBAJ_T0072948.1 MGP_CBAJ_G0029560.1 mouse_genomes_project 5 122622206 122629704 + Ttc28 protein_coding processed_transcript MGP_CBAJ_T0072949.1 MGP_CBAJ_G0029560.1 mouse_genomes_project 5 122626565 122657203 + Ttc28 protein_coding retained_intron MGP_CBAJ_T0071812.1 MGP_CBAJ_G0029309.1 mouse_genomes_project 5 81952013 81963269 + Srd5a3 protein_coding retained_intron MGP_CBAJ_T0071813.1 MGP_CBAJ_G0029309.1 mouse_genomes_project 5 81952048 81952605 + Srd5a3 protein_coding processed_transcript MGP_CBAJ_T0071814.1 MGP_CBAJ_G0029309.1 mouse_genomes_project 5 81952070 81967195 + MGP_CBAJ_P0071814 Srd5a3 protein_coding protein_coding MGP_CBAJ_T0071815.1 MGP_CBAJ_G0029309.1 mouse_genomes_project 5 81952442 81961517 + MGP_CBAJ_P0071815 Srd5a3 protein_coding protein_coding MGP_CBAJ_T0071816.1 MGP_CBAJ_G0029309.1 mouse_genomes_project 5 81958376 81966964 + MGP_CBAJ_P0071816 Srd5a3 protein_coding protein_coding MGP_CBAJ_T0071817.1 MGP_CBAJ_G0029309.1 mouse_genomes_project 5 81964522 81967224 + Srd5a3 protein_coding retained_intron MGP_CBAJ_T0014702.1 MGP_CBAJ_G0012814.1 mouse_genomes_project 5 27995988 27997284 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014937.1 MGP_CBAJ_G0013049.1 mouse_genomes_project 5 149076468 149077312 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014970.1 MGP_CBAJ_G0013082.1 mouse_genomes_project 5 161436000 161436138 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099409.1 MGP_CBAJ_G0037664.1 mouse_genomes_project 5 169041280 169041381 - Gm23641 snRNA snRNA MGP_CBAJ_T0069939.1 MGP_CBAJ_G0028990.1 mouse_genomes_project 5 21780463 21840352 - Orc5 protein_coding retained_intron MGP_CBAJ_T0069940.1 MGP_CBAJ_G0028990.1 mouse_genomes_project 5 21780467 21840423 - MGP_CBAJ_P0069940 Orc5 protein_coding protein_coding MGP_CBAJ_T0069941.1 MGP_CBAJ_G0028990.1 mouse_genomes_project 5 21808288 21812109 - Orc5 protein_coding retained_intron MGP_CBAJ_T0069942.1 MGP_CBAJ_G0028990.1 mouse_genomes_project 5 21812958 21839566 - MGP_CBAJ_P0069942 Orc5 protein_coding protein_coding MGP_CBAJ_T0069943.1 MGP_CBAJ_G0028990.1 mouse_genomes_project 5 21812993 21840423 - Orc5 protein_coding processed_transcript MGP_CBAJ_T0069944.1 MGP_CBAJ_G0028990.1 mouse_genomes_project 5 21836445 21840477 - Orc5 protein_coding processed_transcript MGP_CBAJ_T0001434.1 MGP_CBAJ_G0001358.1 mouse_genomes_project 5 22227918 22232652 - TEC TEC MGP_CBAJ_T0071437.1 MGP_CBAJ_G0029249.1 mouse_genomes_project 5 69965980 70016232 - MGP_CBAJ_P0071437 Smim14 protein_coding protein_coding MGP_CBAJ_T0071438.1 MGP_CBAJ_G0029249.1 mouse_genomes_project 5 69968804 70015892 - MGP_CBAJ_P0071438 Smim14 protein_coding protein_coding MGP_CBAJ_T0071439.1 MGP_CBAJ_G0029249.1 mouse_genomes_project 5 69968805 70015703 - MGP_CBAJ_P0071439 Smim14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071440.1 MGP_CBAJ_G0029249.1 mouse_genomes_project 5 69968928 69980117 - Smim14 protein_coding retained_intron MGP_CBAJ_T0071441.1 MGP_CBAJ_G0029249.1 mouse_genomes_project 5 69971835 69977325 - Smim14 protein_coding retained_intron MGP_CBAJ_T0071442.1 MGP_CBAJ_G0029249.1 mouse_genomes_project 5 69979371 70070117 - MGP_CBAJ_P0071442 Smim14 protein_coding protein_coding MGP_CBAJ_T0071443.1 MGP_CBAJ_G0029249.1 mouse_genomes_project 5 69984958 70070062 - Smim14 protein_coding retained_intron MGP_CBAJ_T0071444.1 MGP_CBAJ_G0029249.1 mouse_genomes_project 5 69986907 70015713 - Smim14 protein_coding retained_intron MGP_CBAJ_T0071445.1 MGP_CBAJ_G0029249.1 mouse_genomes_project 5 70012780 70016232 - Smim14 protein_coding retained_intron MGP_CBAJ_T0001551.1 MGP_CBAJ_G0001471.1 mouse_genomes_project 5 54560490 54564165 - TEC TEC MGP_CBAJ_T0099392.1 MGP_CBAJ_G0037647.1 mouse_genomes_project 5 130753383 130753490 - Gm26411 snRNA snRNA MGP_CBAJ_T0071765.1 MGP_CBAJ_G0029302.1 mouse_genomes_project 5 80221434 80286789 + MGP_CBAJ_P0071765 Fip1l1 protein_coding protein_coding MGP_CBAJ_T0071766.1 MGP_CBAJ_G0029302.1 mouse_genomes_project 5 80221456 80286799 + MGP_CBAJ_P0071766 Fip1l1 protein_coding protein_coding MGP_CBAJ_T0071767.1 MGP_CBAJ_G0029302.1 mouse_genomes_project 5 80221464 80280429 + MGP_CBAJ_P0071767 Fip1l1 protein_coding protein_coding MGP_CBAJ_T0071768.1 MGP_CBAJ_G0029302.1 mouse_genomes_project 5 80221466 80284144 + MGP_CBAJ_P0071768 Fip1l1 protein_coding protein_coding MGP_CBAJ_T0071769.1 MGP_CBAJ_G0029302.1 mouse_genomes_project 5 80221469 80226554 + Fip1l1 protein_coding retained_intron MGP_CBAJ_T0071770.1 MGP_CBAJ_G0029302.1 mouse_genomes_project 5 80221488 80279811 + MGP_CBAJ_P0071770 Fip1l1 protein_coding protein_coding MGP_CBAJ_T0071771.1 MGP_CBAJ_G0029302.1 mouse_genomes_project 5 80221669 80273430 + Fip1l1 protein_coding retained_intron MGP_CBAJ_T0071772.1 MGP_CBAJ_G0029302.1 mouse_genomes_project 5 80221964 80231448 + Fip1l1 protein_coding processed_transcript MGP_CBAJ_T0071773.1 MGP_CBAJ_G0029302.1 mouse_genomes_project 5 80272735 80279911 + Fip1l1 protein_coding retained_intron MGP_CBAJ_T0071774.1 MGP_CBAJ_G0029302.1 mouse_genomes_project 5 80272780 80276222 + Fip1l1 protein_coding retained_intron MGP_CBAJ_T0071775.1 MGP_CBAJ_G0029302.1 mouse_genomes_project 5 80274127 80276417 + Fip1l1 protein_coding retained_intron MGP_CBAJ_T0071776.1 MGP_CBAJ_G0029302.1 mouse_genomes_project 5 80274801 80280001 + Fip1l1 protein_coding retained_intron MGP_CBAJ_T0071781.1 MGP_CBAJ_G0029302.1 mouse_genomes_project 5 80282718 80283929 + Fip1l1 protein_coding retained_intron MGP_CBAJ_T0014823.1 MGP_CBAJ_G0012935.1 mouse_genomes_project 5 85884903 85886014 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014994.1 MGP_CBAJ_G0013106.1 mouse_genomes_project 5 167797023 167797573 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001844.1 MGP_CBAJ_G0001760.1 mouse_genomes_project 5 150681021 150681825 + TEC TEC MGP_CBAJ_T0004616.1 MGP_CBAJ_G0003992.1 mouse_genomes_project 5 68227655 68228725 + Gm15819 antisense antisense MGP_CBAJ_T0008143.1 MGP_CBAJ_G0006625.1 mouse_genomes_project 5 115480725 115486399 + Gm26519 lincRNA lincRNA MGP_CBAJ_T0014632.1 MGP_CBAJ_G0012744.1 mouse_genomes_project 5 4068687 4068976 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001612.1 MGP_CBAJ_G0001531.1 mouse_genomes_project 5 70874380 70877330 + TEC TEC MGP_CBAJ_T0014673.1 MGP_CBAJ_G0012785.1 mouse_genomes_project 5 21580702 21581072 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0075473.1 MGP_CBAJ_G0030048.1 mouse_genomes_project 5 163874493 163886776 - MGP_CBAJ_P0075473 Rnf6 protein_coding protein_coding MGP_CBAJ_T0075474.1 MGP_CBAJ_G0030048.1 mouse_genomes_project 5 163874497 163886117 - MGP_CBAJ_P0075474 Rnf6 protein_coding protein_coding MGP_CBAJ_T0075475.1 MGP_CBAJ_G0030048.1 mouse_genomes_project 5 163875257 163886192 - MGP_CBAJ_P0075475 Rnf6 protein_coding protein_coding MGP_CBAJ_T0075476.1 MGP_CBAJ_G0030048.1 mouse_genomes_project 5 163876603 163883055 - MGP_CBAJ_P0075476 Rnf6 protein_coding protein_coding MGP_CBAJ_T0075477.1 MGP_CBAJ_G0030048.1 mouse_genomes_project 5 163876976 163886639 - MGP_CBAJ_P0075477 Rnf6 protein_coding protein_coding MGP_CBAJ_T0075478.1 MGP_CBAJ_G0030048.1 mouse_genomes_project 5 163877004 163886151 - MGP_CBAJ_P0075478 Rnf6 protein_coding protein_coding MGP_CBAJ_T0075479.1 MGP_CBAJ_G0030048.1 mouse_genomes_project 5 163877153 163886164 - MGP_CBAJ_P0075479 Rnf6 protein_coding protein_coding MGP_CBAJ_T0075480.1 MGP_CBAJ_G0030048.1 mouse_genomes_project 5 163883144 163886162 - Rnf6 protein_coding processed_transcript MGP_CBAJ_T0071281.1 MGP_CBAJ_G0029219.1 mouse_genomes_project 5 55623699 55662884 + MGP_CBAJ_P0071281 Anapc4 protein_coding protein_coding MGP_CBAJ_T0071282.1 MGP_CBAJ_G0029219.1 mouse_genomes_project 5 55623813 55661829 + MGP_CBAJ_P0071282 Anapc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071283.1 MGP_CBAJ_G0029219.1 mouse_genomes_project 5 55632374 55638282 + Anapc4 protein_coding retained_intron MGP_CBAJ_T0071284.1 MGP_CBAJ_G0029219.1 mouse_genomes_project 5 55632490 55640181 + MGP_CBAJ_P0071284 Anapc4 protein_coding protein_coding MGP_CBAJ_T0071285.1 MGP_CBAJ_G0029219.1 mouse_genomes_project 5 55632503 55640168 + MGP_CBAJ_P0071285 Anapc4 protein_coding protein_coding MGP_CBAJ_T0071286.1 MGP_CBAJ_G0029219.1 mouse_genomes_project 5 55637219 55638357 + Anapc4 protein_coding retained_intron MGP_CBAJ_T0071287.1 MGP_CBAJ_G0029219.1 mouse_genomes_project 5 55639805 55654249 + Anapc4 protein_coding retained_intron MGP_CBAJ_T0071288.1 MGP_CBAJ_G0029219.1 mouse_genomes_project 5 55645709 55649881 + Anapc4 protein_coding retained_intron MGP_CBAJ_T0071289.1 MGP_CBAJ_G0029219.1 mouse_genomes_project 5 55654141 55661083 + Anapc4 protein_coding retained_intron MGP_CBAJ_T0071290.1 MGP_CBAJ_G0029219.1 mouse_genomes_project 5 55655995 55657637 + Anapc4 protein_coding retained_intron MGP_CBAJ_T0071291.1 MGP_CBAJ_G0029219.1 mouse_genomes_project 5 55656237 55659742 + Anapc4 protein_coding retained_intron MGP_CBAJ_T0071292.1 MGP_CBAJ_G0029219.1 mouse_genomes_project 5 55660699 55661821 + Anapc4 protein_coding retained_intron MGP_CBAJ_T0008238.1 MGP_CBAJ_G0006689.1 mouse_genomes_project 5 132720395 132722934 - 1700021F13Rik lincRNA lincRNA MGP_CBAJ_T0008239.1 MGP_CBAJ_G0006689.1 mouse_genomes_project 5 132720399 132722732 - 1700021F13Rik lincRNA lincRNA MGP_CBAJ_T0014766.1 MGP_CBAJ_G0012878.1 mouse_genomes_project 5 60993204 60993835 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011696.1 MGP_CBAJ_G0009818.1 mouse_genomes_project 5 77502144 77528998 + MGP_CBAJ_P0011696 Atp10d polymorphic_pseudogene protein_coding MGP_CBAJ_T0011697.1 MGP_CBAJ_G0009818.1 mouse_genomes_project 5 77502144 77601780 + MGP_CBAJ_P0011697 Atp10d polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0011698.1 MGP_CBAJ_G0009818.1 mouse_genomes_project 5 77502168 77528135 + Atp10d polymorphic_pseudogene retained_intron MGP_CBAJ_T0011699.1 MGP_CBAJ_G0009818.1 mouse_genomes_project 5 77564346 77601780 + Atp10d polymorphic_pseudogene processed_transcript MGP_CBAJ_T0011700.1 MGP_CBAJ_G0009818.1 mouse_genomes_project 5 77580842 77601766 + MGP_CBAJ_P0011700 Atp10d polymorphic_pseudogene protein_coding MGP_CBAJ_T0011701.1 MGP_CBAJ_G0009818.1 mouse_genomes_project 5 77580842 77601767 + Atp10d polymorphic_pseudogene processed_transcript MGP_CBAJ_T0101121.1 MGP_CBAJ_G0039317.1 mouse_genomes_project 5 21817741 21818098 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101122.1 MGP_CBAJ_G0039317.1 mouse_genomes_project 5 21817741 21818623 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0004738.1 MGP_CBAJ_G0004080.1 mouse_genomes_project 5 136214049 136217434 + Gm43301 antisense antisense MGP_CBAJ_T0074773.1 MGP_CBAJ_G0029890.1 mouse_genomes_project 5 153223359 153357124 - MGP_CBAJ_P0074773 Zan protein_coding protein_coding MGP_CBAJ_T0074774.1 MGP_CBAJ_G0029890.1 mouse_genomes_project 5 153223359 153356655 - MGP_CBAJ_P0074774 Zan protein_coding protein_coding MGP_CBAJ_T0074775.1 MGP_CBAJ_G0029890.1 mouse_genomes_project 5 153245420 153248416 - Zan protein_coding retained_intron MGP_CBAJ_T0074776.1 MGP_CBAJ_G0029890.1 mouse_genomes_project 5 153262844 153268010 - MGP_CBAJ_P0074776 Zan protein_coding nonsense_mediated_decay MGP_CBAJ_T0074777.1 MGP_CBAJ_G0029890.1 mouse_genomes_project 5 153301395 153320125 - Zan protein_coding retained_intron MGP_CBAJ_T0001637.1 MGP_CBAJ_G0001556.1 mouse_genomes_project 5 74259528 74263618 - TEC TEC MGP_CBAJ_T0072268.1 MGP_CBAJ_G0029420.1 mouse_genomes_project 5 100694722 100734125 - MGP_CBAJ_P0072268 protein_coding protein_coding MGP_CBAJ_T0072269.1 MGP_CBAJ_G0029420.1 mouse_genomes_project 5 100721686 100723823 - protein_coding retained_intron MGP_CBAJ_T0072270.1 MGP_CBAJ_G0029420.1 mouse_genomes_project 5 100724641 100733453 - protein_coding processed_transcript MGP_CBAJ_T0072271.1 MGP_CBAJ_G0029420.1 mouse_genomes_project 5 100726923 100733997 - protein_coding retained_intron MGP_CBAJ_T0072272.1 MGP_CBAJ_G0029420.1 mouse_genomes_project 5 100727194 100734020 - MGP_CBAJ_P0072272 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072273.1 MGP_CBAJ_G0029420.1 mouse_genomes_project 5 100729803 100734029 - MGP_CBAJ_P0072273 protein_coding protein_coding MGP_CBAJ_T0072274.1 MGP_CBAJ_G0029420.1 mouse_genomes_project 5 100729811 100733663 - MGP_CBAJ_P0072274 protein_coding protein_coding MGP_CBAJ_T0098433.1 MGP_CBAJ_G0036695.1 mouse_genomes_project 5 169054830 169058878 + Gm42531 sense_intronic sense_intronic MGP_CBAJ_T0073781.1 MGP_CBAJ_G0029721.1 mouse_genomes_project 5 136459215 136498227 - MGP_CBAJ_P0073781 Anapc5 protein_coding protein_coding MGP_CBAJ_T0073782.1 MGP_CBAJ_G0029721.1 mouse_genomes_project 5 136459477 136498175 - MGP_CBAJ_P0073782 Anapc5 protein_coding protein_coding MGP_CBAJ_T0073783.1 MGP_CBAJ_G0029721.1 mouse_genomes_project 5 136459477 136498168 - MGP_CBAJ_P0073783 Anapc5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073784.1 MGP_CBAJ_G0029721.1 mouse_genomes_project 5 136459477 136498175 - MGP_CBAJ_P0073784 Anapc5 protein_coding protein_coding MGP_CBAJ_T0073785.1 MGP_CBAJ_G0029721.1 mouse_genomes_project 5 136459479 136498168 - MGP_CBAJ_P0073785 Anapc5 protein_coding protein_coding MGP_CBAJ_T0073786.1 MGP_CBAJ_G0029721.1 mouse_genomes_project 5 136459483 136498168 - MGP_CBAJ_P0073786 Anapc5 protein_coding protein_coding MGP_CBAJ_T0073787.1 MGP_CBAJ_G0029721.1 mouse_genomes_project 5 136459487 136498182 - MGP_CBAJ_P0073787 Anapc5 protein_coding protein_coding MGP_CBAJ_T0073788.1 MGP_CBAJ_G0029721.1 mouse_genomes_project 5 136459671 136465615 - MGP_CBAJ_P0073788 Anapc5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073789.1 MGP_CBAJ_G0029721.1 mouse_genomes_project 5 136460171 136476871 - Anapc5 protein_coding retained_intron MGP_CBAJ_T0073790.1 MGP_CBAJ_G0029721.1 mouse_genomes_project 5 136463631 136466567 - MGP_CBAJ_P0073790 Anapc5 protein_coding protein_coding MGP_CBAJ_T0073791.1 MGP_CBAJ_G0029721.1 mouse_genomes_project 5 136465536 136479607 - Anapc5 protein_coding retained_intron MGP_CBAJ_T0073792.1 MGP_CBAJ_G0029721.1 mouse_genomes_project 5 136476535 136484484 - MGP_CBAJ_P0073792 Anapc5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073793.1 MGP_CBAJ_G0029721.1 mouse_genomes_project 5 136476610 136495471 - Anapc5 protein_coding processed_transcript MGP_CBAJ_T0073794.1 MGP_CBAJ_G0029721.1 mouse_genomes_project 5 136477235 136483492 - Anapc5 protein_coding retained_intron MGP_CBAJ_T0073795.1 MGP_CBAJ_G0029721.1 mouse_genomes_project 5 136477419 136498167 - Anapc5 protein_coding retained_intron MGP_CBAJ_T0073796.1 MGP_CBAJ_G0029721.1 mouse_genomes_project 5 136482984 136497906 - Anapc5 protein_coding retained_intron MGP_CBAJ_T0073797.1 MGP_CBAJ_G0029721.1 mouse_genomes_project 5 136484469 136498158 - MGP_CBAJ_P0073797 Anapc5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073798.1 MGP_CBAJ_G0029721.1 mouse_genomes_project 5 136494744 136498163 - Anapc5 protein_coding processed_transcript MGP_CBAJ_T0010613.1 MGP_CBAJ_G0008751.1 mouse_genomes_project 5 157729811 157729892 + Gm44385 miRNA miRNA MGP_CBAJ_T0074592.1 MGP_CBAJ_G0029858.1 mouse_genomes_project 5 151471369 151492075 - MGP_CBAJ_P0074592 Ssc4d protein_coding protein_coding MGP_CBAJ_T0074593.1 MGP_CBAJ_G0029858.1 mouse_genomes_project 5 151471381 151492041 - MGP_CBAJ_P0074593 Ssc4d protein_coding protein_coding MGP_CBAJ_T0074594.1 MGP_CBAJ_G0029858.1 mouse_genomes_project 5 151471382 151473487 - MGP_CBAJ_P0074594 Ssc4d protein_coding protein_coding MGP_CBAJ_T0074595.1 MGP_CBAJ_G0029858.1 mouse_genomes_project 5 151471985 151473435 - MGP_CBAJ_P0074595 Ssc4d protein_coding protein_coding MGP_CBAJ_T0074596.1 MGP_CBAJ_G0029858.1 mouse_genomes_project 5 151477436 151480096 - MGP_CBAJ_P0074596 Ssc4d protein_coding protein_coding MGP_CBAJ_T0074597.1 MGP_CBAJ_G0029858.1 mouse_genomes_project 5 151477646 151485434 - MGP_CBAJ_P0074597 Ssc4d protein_coding protein_coding MGP_CBAJ_T0074598.1 MGP_CBAJ_G0029858.1 mouse_genomes_project 5 151480360 151491984 - MGP_CBAJ_P0074598 Ssc4d protein_coding protein_coding MGP_CBAJ_T0073943.1 MGP_CBAJ_G0029742.1 mouse_genomes_project 5 137639885 137644225 + Kntc1 protein_coding retained_intron MGP_CBAJ_T0073944.1 MGP_CBAJ_G0029742.1 mouse_genomes_project 5 137639895 137716462 + MGP_CBAJ_P0073944 Kntc1 protein_coding protein_coding MGP_CBAJ_T0073945.1 MGP_CBAJ_G0029742.1 mouse_genomes_project 5 137665538 137672386 + Kntc1 protein_coding processed_transcript MGP_CBAJ_T0073946.1 MGP_CBAJ_G0029742.1 mouse_genomes_project 5 137673932 137674823 + MGP_CBAJ_P0073946 Kntc1 protein_coding protein_coding MGP_CBAJ_T0073947.1 MGP_CBAJ_G0029742.1 mouse_genomes_project 5 137679896 137682811 + Kntc1 protein_coding retained_intron MGP_CBAJ_T0073948.1 MGP_CBAJ_G0029742.1 mouse_genomes_project 5 137706265 137716460 + MGP_CBAJ_P0073948 Kntc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073949.1 MGP_CBAJ_G0029742.1 mouse_genomes_project 5 137714417 137716461 + Kntc1 protein_coding retained_intron MGP_CBAJ_T0014763.1 MGP_CBAJ_G0012875.1 mouse_genomes_project 5 60718867 60720217 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001656.1 MGP_CBAJ_G0001574.1 mouse_genomes_project 5 79797906 79801842 - TEC TEC MGP_CBAJ_T0074695.1 MGP_CBAJ_G0029874.1 mouse_genomes_project 5 152659826 152675689 + MGP_CBAJ_P0074695 Fis1 protein_coding protein_coding MGP_CBAJ_T0074696.1 MGP_CBAJ_G0029874.1 mouse_genomes_project 5 152659957 152675606 + MGP_CBAJ_P0074696 Fis1 protein_coding protein_coding MGP_CBAJ_T0074697.1 MGP_CBAJ_G0029874.1 mouse_genomes_project 5 152671546 152675691 + MGP_CBAJ_P0074697 Fis1 protein_coding protein_coding MGP_CBAJ_T0074698.1 MGP_CBAJ_G0029874.1 mouse_genomes_project 5 152671902 152675414 + Fis1 protein_coding processed_transcript MGP_CBAJ_T0074699.1 MGP_CBAJ_G0029874.1 mouse_genomes_project 5 152671913 152675567 + Fis1 protein_coding processed_transcript MGP_CBAJ_T0074700.1 MGP_CBAJ_G0029874.1 mouse_genomes_project 5 152672314 152675468 + Fis1 protein_coding processed_transcript MGP_CBAJ_T0008014.1 MGP_CBAJ_G0006523.1 mouse_genomes_project 5 45154234 45156423 - Gm43020 lincRNA lincRNA MGP_CBAJ_T0099343.1 MGP_CBAJ_G0037598.1 mouse_genomes_project 5 35015778 35015881 + Gm25918 snRNA snRNA MGP_CBAJ_T0070813.1 MGP_CBAJ_G0029138.1 mouse_genomes_project 5 35701296 35773053 + Htt protein_coding retained_intron MGP_CBAJ_T0070814.1 MGP_CBAJ_G0029138.1 mouse_genomes_project 5 35701300 35872347 + MGP_CBAJ_P0070814 Htt protein_coding protein_coding MGP_CBAJ_T0070815.1 MGP_CBAJ_G0029138.1 mouse_genomes_project 5 35701317 35763860 + Htt protein_coding retained_intron MGP_CBAJ_T0070816.1 MGP_CBAJ_G0029138.1 mouse_genomes_project 5 35744971 35747585 + Htt protein_coding retained_intron MGP_CBAJ_T0070817.1 MGP_CBAJ_G0029138.1 mouse_genomes_project 5 35755929 35760995 + Htt protein_coding retained_intron MGP_CBAJ_T0070818.1 MGP_CBAJ_G0029138.1 mouse_genomes_project 5 35759210 35761481 + Htt protein_coding retained_intron MGP_CBAJ_T0070819.1 MGP_CBAJ_G0029138.1 mouse_genomes_project 5 35826896 35834683 + Htt protein_coding retained_intron MGP_CBAJ_T0070820.1 MGP_CBAJ_G0029138.1 mouse_genomes_project 5 35836155 35858622 + Htt protein_coding retained_intron MGP_CBAJ_T0001489.1 MGP_CBAJ_G0001410.1 mouse_genomes_project 5 45632000 45634528 + TEC TEC MGP_CBAJ_T0014985.1 MGP_CBAJ_G0013097.1 mouse_genomes_project 5 164905509 164906002 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0073240.1 MGP_CBAJ_G0029620.1 mouse_genomes_project 5 127184448 127193475 - Acads protein_coding retained_intron MGP_CBAJ_T0073241.1 MGP_CBAJ_G0029620.1 mouse_genomes_project 5 127184448 127193534 - MGP_CBAJ_P0073241 Acads protein_coding protein_coding MGP_CBAJ_T0073242.1 MGP_CBAJ_G0029620.1 mouse_genomes_project 5 127186145 127193498 - Acads protein_coding processed_transcript MGP_CBAJ_T0073243.1 MGP_CBAJ_G0029620.1 mouse_genomes_project 5 127186933 127193463 - Acads protein_coding retained_intron MGP_CBAJ_T0070729.1 MGP_CBAJ_G0029128.1 mouse_genomes_project 5 35054144 35154327 - MGP_CBAJ_P0070729 Zfyve28 protein_coding protein_coding MGP_CBAJ_T0070730.1 MGP_CBAJ_G0029128.1 mouse_genomes_project 5 35080736 35095773 - Zfyve28 protein_coding retained_intron MGP_CBAJ_T0070731.1 MGP_CBAJ_G0029128.1 mouse_genomes_project 5 35080821 35096235 - Zfyve28 protein_coding processed_transcript MGP_CBAJ_T0070732.1 MGP_CBAJ_G0029128.1 mouse_genomes_project 5 35085087 35106778 - Zfyve28 protein_coding retained_intron MGP_CBAJ_T0070733.1 MGP_CBAJ_G0029128.1 mouse_genomes_project 5 35089805 35154450 - Zfyve28 protein_coding processed_transcript MGP_CBAJ_T0070734.1 MGP_CBAJ_G0029128.1 mouse_genomes_project 5 35097628 35154438 - MGP_CBAJ_P0070734 Zfyve28 protein_coding protein_coding MGP_CBAJ_T0073202.1 MGP_CBAJ_G0029609.1 mouse_genomes_project 5 126778912 126788326 - MGP_CBAJ_P0073202 1500011B03Rik protein_coding protein_coding MGP_CBAJ_T0069891.1 MGP_CBAJ_G0028980.1 mouse_genomes_project 5 20582388 20645686 + MGP_CBAJ_P0069891 Fam185a protein_coding protein_coding MGP_CBAJ_T0069892.1 MGP_CBAJ_G0028980.1 mouse_genomes_project 5 20582431 20593438 + Fam185a protein_coding retained_intron MGP_CBAJ_T0069893.1 MGP_CBAJ_G0028980.1 mouse_genomes_project 5 20593572 20644366 + Fam185a protein_coding processed_transcript MGP_CBAJ_T0072228.1 MGP_CBAJ_G0029414.1 mouse_genomes_project 5 100462173 100509757 - MGP_CBAJ_P0072228 Ppef2 protein_coding protein_coding MGP_CBAJ_T0072229.1 MGP_CBAJ_G0029414.1 mouse_genomes_project 5 100462183 100464521 - Ppef2 protein_coding processed_transcript MGP_CBAJ_T0072230.1 MGP_CBAJ_G0029414.1 mouse_genomes_project 5 100462468 100506644 - MGP_CBAJ_P0072230 Ppef2 protein_coding protein_coding MGP_CBAJ_T0014820.1 MGP_CBAJ_G0012932.1 mouse_genomes_project 5 84637457 84638321 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011488.1 MGP_CBAJ_G0009626.1 mouse_genomes_project 5 156407074 156407395 + Gm24146 misc_RNA misc_RNA MGP_CBAJ_T0070097.1 MGP_CBAJ_G0029019.1 mouse_genomes_project 5 24423900 24424216 - Crygn protein_coding processed_transcript MGP_CBAJ_T0070098.1 MGP_CBAJ_G0029019.1 mouse_genomes_project 5 24423900 24430935 - MGP_CBAJ_P0070098 Crygn protein_coding protein_coding MGP_CBAJ_T0101945.1 MGP_CBAJ_G0039976.1 mouse_genomes_project 5 103337419 103341404 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0001529.1 MGP_CBAJ_G0001449.1 mouse_genomes_project 5 51377372 51378680 - TEC TEC MGP_CBAJ_T0014785.1 MGP_CBAJ_G0012897.1 mouse_genomes_project 5 68535896 68536848 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001821.1 MGP_CBAJ_G0001738.1 mouse_genomes_project 5 146944949 146945923 - TEC TEC MGP_CBAJ_T0074585.1 MGP_CBAJ_G0029856.1 mouse_genomes_project 5 151376445 151378090 + MGP_CBAJ_P0074585 Hspb1 protein_coding protein_coding MGP_CBAJ_T0074586.1 MGP_CBAJ_G0029856.1 mouse_genomes_project 5 151376544 151378088 + MGP_CBAJ_P0074586 Hspb1 protein_coding protein_coding MGP_CBAJ_T0070585.1 MGP_CBAJ_G0029106.1 mouse_genomes_project 5 33550020 33579204 + MGP_CBAJ_P0070585 Depdc5 protein_coding protein_coding MGP_CBAJ_T0070586.1 MGP_CBAJ_G0029106.1 mouse_genomes_project 5 33550025 33590497 + MGP_CBAJ_P0070586 Depdc5 protein_coding protein_coding MGP_CBAJ_T0070587.1 MGP_CBAJ_G0029106.1 mouse_genomes_project 5 33550032 33697107 + MGP_CBAJ_P0070587 Depdc5 protein_coding protein_coding MGP_CBAJ_T0070588.1 MGP_CBAJ_G0029106.1 mouse_genomes_project 5 33550032 33554375 + MGP_CBAJ_P0070588 Depdc5 protein_coding protein_coding MGP_CBAJ_T0070589.1 MGP_CBAJ_G0029106.1 mouse_genomes_project 5 33550040 33659027 + MGP_CBAJ_P0070589 Depdc5 protein_coding protein_coding MGP_CBAJ_T0070590.1 MGP_CBAJ_G0029106.1 mouse_genomes_project 5 33550053 33697105 + MGP_CBAJ_P0070590 Depdc5 protein_coding protein_coding MGP_CBAJ_T0070591.1 MGP_CBAJ_G0029106.1 mouse_genomes_project 5 33550079 33601496 + Depdc5 protein_coding retained_intron MGP_CBAJ_T0070592.1 MGP_CBAJ_G0029106.1 mouse_genomes_project 5 33550089 33579823 + Depdc5 protein_coding retained_intron MGP_CBAJ_T0070593.1 MGP_CBAJ_G0029106.1 mouse_genomes_project 5 33550089 33624046 + MGP_CBAJ_P0070593 Depdc5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070594.1 MGP_CBAJ_G0029106.1 mouse_genomes_project 5 33550091 33567647 + MGP_CBAJ_P0070594 Depdc5 protein_coding protein_coding MGP_CBAJ_T0070595.1 MGP_CBAJ_G0029106.1 mouse_genomes_project 5 33550096 33659025 + Depdc5 protein_coding processed_transcript MGP_CBAJ_T0070596.1 MGP_CBAJ_G0029106.1 mouse_genomes_project 5 33550474 33554387 + MGP_CBAJ_P0070596 Depdc5 protein_coding protein_coding MGP_CBAJ_T0070597.1 MGP_CBAJ_G0029106.1 mouse_genomes_project 5 33550906 33694539 + MGP_CBAJ_P0070597 Depdc5 protein_coding protein_coding MGP_CBAJ_T0070598.1 MGP_CBAJ_G0029106.1 mouse_genomes_project 5 33598906 33616590 + MGP_CBAJ_P0070598 Depdc5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070599.1 MGP_CBAJ_G0029106.1 mouse_genomes_project 5 33624071 33694532 + MGP_CBAJ_P0070599 Depdc5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070600.1 MGP_CBAJ_G0029106.1 mouse_genomes_project 5 33624169 33694539 + MGP_CBAJ_P0070600 Depdc5 protein_coding protein_coding MGP_CBAJ_T0070601.1 MGP_CBAJ_G0029106.1 mouse_genomes_project 5 33644029 33645243 + Depdc5 protein_coding retained_intron MGP_CBAJ_T0070602.1 MGP_CBAJ_G0029106.1 mouse_genomes_project 5 33644324 33667508 + MGP_CBAJ_P0070602 Depdc5 protein_coding protein_coding MGP_CBAJ_T0070603.1 MGP_CBAJ_G0029106.1 mouse_genomes_project 5 33670542 33676975 + Depdc5 protein_coding retained_intron MGP_CBAJ_T0008316.1 MGP_CBAJ_G0006736.1 mouse_genomes_project 5 153612708 153618353 - Gm15498 lincRNA lincRNA MGP_CBAJ_T0008258.1 MGP_CBAJ_G0006699.1 mouse_genomes_project 5 136951151 136953312 - Gm43409 lincRNA lincRNA MGP_CBAJ_T0004705.1 MGP_CBAJ_G0004058.1 mouse_genomes_project 5 127005763 127008343 + Hnf1aos2 antisense antisense MGP_CBAJ_T0017929.1 MGP_CBAJ_G0015355.1 mouse_genomes_project 5 138634927 138638254 + Tctn2 processed_transcript retained_intron MGP_CBAJ_T0017930.1 MGP_CBAJ_G0015355.1 mouse_genomes_project 5 138634927 138668836 + Tctn2 processed_transcript processed_transcript MGP_CBAJ_T0017931.1 MGP_CBAJ_G0015355.1 mouse_genomes_project 5 138634962 138641832 + Tctn2 processed_transcript retained_intron MGP_CBAJ_T0017932.1 MGP_CBAJ_G0015355.1 mouse_genomes_project 5 138634965 138639506 + Tctn2 processed_transcript retained_intron MGP_CBAJ_T0017933.1 MGP_CBAJ_G0015355.1 mouse_genomes_project 5 138634970 138659649 + Tctn2 processed_transcript retained_intron MGP_CBAJ_T0017934.1 MGP_CBAJ_G0015355.1 mouse_genomes_project 5 138634975 138668556 + Tctn2 processed_transcript processed_transcript MGP_CBAJ_T0071670.1 MGP_CBAJ_G0029285.1 mouse_genomes_project 5 78063895 78109625 - MGP_CBAJ_P0071670 Txk protein_coding protein_coding MGP_CBAJ_T0071671.1 MGP_CBAJ_G0029285.1 mouse_genomes_project 5 78063895 78130755 - MGP_CBAJ_P0071671 Txk protein_coding protein_coding MGP_CBAJ_T0071672.1 MGP_CBAJ_G0029285.1 mouse_genomes_project 5 78063895 78130751 - MGP_CBAJ_P0071672 Txk protein_coding protein_coding MGP_CBAJ_T0071673.1 MGP_CBAJ_G0029285.1 mouse_genomes_project 5 78063897 78130751 - MGP_CBAJ_P0071673 Txk protein_coding protein_coding MGP_CBAJ_T0071674.1 MGP_CBAJ_G0029285.1 mouse_genomes_project 5 78063903 78108929 - Txk protein_coding processed_transcript MGP_CBAJ_T0071675.1 MGP_CBAJ_G0029285.1 mouse_genomes_project 5 78063903 78108929 - Txk protein_coding processed_transcript MGP_CBAJ_T0071676.1 MGP_CBAJ_G0029285.1 mouse_genomes_project 5 78073064 78130752 - Txk protein_coding retained_intron MGP_CBAJ_T0071677.1 MGP_CBAJ_G0029285.1 mouse_genomes_project 5 78126532 78130748 - Txk protein_coding retained_intron MGP_CBAJ_T0073971.1 MGP_CBAJ_G0029749.1 mouse_genomes_project 5 137944331 137971992 - MGP_CBAJ_P0073971 Vps37b protein_coding protein_coding MGP_CBAJ_T0073972.1 MGP_CBAJ_G0029749.1 mouse_genomes_project 5 137945826 137951422 - Vps37b protein_coding processed_transcript MGP_CBAJ_T0073973.1 MGP_CBAJ_G0029749.1 mouse_genomes_project 5 137967484 137971980 - Vps37b protein_coding processed_transcript MGP_CBAJ_T0074587.1 MGP_CBAJ_G0029857.1 mouse_genomes_project 5 151397385 151432741 - MGP_CBAJ_P0074587 Ywhag protein_coding protein_coding MGP_CBAJ_T0074588.1 MGP_CBAJ_G0029857.1 mouse_genomes_project 5 151397385 151432696 - MGP_CBAJ_P0074588 Ywhag protein_coding protein_coding MGP_CBAJ_T0074589.1 MGP_CBAJ_G0029857.1 mouse_genomes_project 5 151428835 151432739 - Ywhag protein_coding retained_intron MGP_CBAJ_T0074590.1 MGP_CBAJ_G0029857.1 mouse_genomes_project 5 151428840 151432758 - Ywhag protein_coding processed_transcript MGP_CBAJ_T0074591.1 MGP_CBAJ_G0029857.1 mouse_genomes_project 5 151428916 151432692 - Ywhag protein_coding processed_transcript MGP_CBAJ_T0072704.1 MGP_CBAJ_G0029513.1 mouse_genomes_project 5 118309082 118313673 + Rpl5 protein_coding retained_intron MGP_CBAJ_T0072705.1 MGP_CBAJ_G0029513.1 mouse_genomes_project 5 118309155 118319275 + MGP_CBAJ_P0072705 Rpl5 protein_coding protein_coding MGP_CBAJ_T0072706.1 MGP_CBAJ_G0029513.1 mouse_genomes_project 5 118310633 118313435 + Rpl5 protein_coding retained_intron MGP_CBAJ_T0072707.1 MGP_CBAJ_G0029513.1 mouse_genomes_project 5 118313663 118319329 + Rpl5 protein_coding retained_intron MGP_CBAJ_T0072708.1 MGP_CBAJ_G0029513.1 mouse_genomes_project 5 118317899 118319334 + Rpl5 protein_coding retained_intron MGP_CBAJ_T0069632.1 MGP_CBAJ_G0028933.1 mouse_genomes_project 5 2694610 2738903 - MGP_CBAJ_P0069632 1700015F17Rik protein_coding protein_coding MGP_CBAJ_T0069633.1 MGP_CBAJ_G0028933.1 mouse_genomes_project 5 2694610 2719497 - MGP_CBAJ_P0069633 1700015F17Rik protein_coding protein_coding MGP_CBAJ_T0069634.1 MGP_CBAJ_G0028933.1 mouse_genomes_project 5 2694615 2738840 - MGP_CBAJ_P0069634 1700015F17Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0017924.1 MGP_CBAJ_G0015352.1 mouse_genomes_project 5 136700802 136730917 - Gm44574 processed_transcript processed_transcript MGP_CBAJ_T0071747.1 MGP_CBAJ_G0029299.1 mouse_genomes_project 5 79584454 79669978 - MGP_CBAJ_P0071747 Usp46 protein_coding protein_coding MGP_CBAJ_T0071748.1 MGP_CBAJ_G0029299.1 mouse_genomes_project 5 79584715 79669989 - MGP_CBAJ_P0071748 Usp46 protein_coding protein_coding MGP_CBAJ_T0071749.1 MGP_CBAJ_G0029299.1 mouse_genomes_project 5 79587815 79635381 - Usp46 protein_coding processed_transcript MGP_CBAJ_T0071750.1 MGP_CBAJ_G0029299.1 mouse_genomes_project 5 79624238 79627233 - MGP_CBAJ_P0071750 Usp46 protein_coding protein_coding MGP_CBAJ_T0071751.1 MGP_CBAJ_G0029299.1 mouse_genomes_project 5 79627067 79632338 - Usp46 protein_coding retained_intron MGP_CBAJ_T0071752.1 MGP_CBAJ_G0029299.1 mouse_genomes_project 5 79627113 79667339 - MGP_CBAJ_P0071752 Usp46 protein_coding protein_coding MGP_CBAJ_T0014904.1 MGP_CBAJ_G0013016.1 mouse_genomes_project 5 122245539 122246210 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004648.1 MGP_CBAJ_G0004019.1 mouse_genomes_project 5 96287473 96287779 + antisense antisense MGP_CBAJ_T0075502.1 MGP_CBAJ_G0030054.1 mouse_genomes_project 5 164619010 164621653 + MGP_CBAJ_P0075502 Rasl11a protein_coding protein_coding MGP_CBAJ_T0075503.1 MGP_CBAJ_G0030054.1 mouse_genomes_project 5 164619688 164621308 + Rasl11a protein_coding retained_intron MGP_CBAJ_T0014891.1 MGP_CBAJ_G0013003.1 mouse_genomes_project 5 118685400 118685876 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010537.1 MGP_CBAJ_G0008675.1 mouse_genomes_project 5 674437 674505 + Gm22926 miRNA miRNA MGP_CBAJ_T0014906.1 MGP_CBAJ_G0013018.1 mouse_genomes_project 5 122387834 122388201 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014843.1 MGP_CBAJ_G0012955.1 mouse_genomes_project 5 96624967 96626357 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001728.1 MGP_CBAJ_G0001646.1 mouse_genomes_project 5 124823749 124824130 + TEC TEC MGP_CBAJ_T0100629.1 MGP_CBAJ_G0038884.1 mouse_genomes_project 5 109185056 109185132 + Gm26252 snoRNA snoRNA MGP_CBAJ_T0004546.1 MGP_CBAJ_G0003936.1 mouse_genomes_project 5 598871 600817 - 4833413G10Rik antisense antisense MGP_CBAJ_T0075085.1 MGP_CBAJ_G0029954.1 mouse_genomes_project 5 156054132 156058649 + MGP_CBAJ_P0075085 Uncx protein_coding protein_coding MGP_CBAJ_T0075086.1 MGP_CBAJ_G0029954.1 mouse_genomes_project 5 156054536 156055907 + MGP_CBAJ_P0075086 Uncx protein_coding protein_coding MGP_CBAJ_T0001641.1 MGP_CBAJ_G0001560.1 mouse_genomes_project 5 74613060 74613386 - TEC TEC MGP_CBAJ_T0071678.1 MGP_CBAJ_G0029286.1 mouse_genomes_project 5 78133695 78262687 - MGP_CBAJ_P0071678 Tec protein_coding protein_coding MGP_CBAJ_T0071679.1 MGP_CBAJ_G0029286.1 mouse_genomes_project 5 78133702 78262702 - MGP_CBAJ_P0071679 Tec protein_coding protein_coding MGP_CBAJ_T0071680.1 MGP_CBAJ_G0029286.1 mouse_genomes_project 5 78133713 78262639 - MGP_CBAJ_P0071680 Tec protein_coding nonsense_mediated_decay MGP_CBAJ_T0071681.1 MGP_CBAJ_G0029286.1 mouse_genomes_project 5 78133717 78262726 - MGP_CBAJ_P0071681 Tec protein_coding nonsense_mediated_decay MGP_CBAJ_T0071682.1 MGP_CBAJ_G0029286.1 mouse_genomes_project 5 78133717 78262689 - MGP_CBAJ_P0071682 Tec protein_coding protein_coding MGP_CBAJ_T0071683.1 MGP_CBAJ_G0029286.1 mouse_genomes_project 5 78133717 78167845 - MGP_CBAJ_P0071683 Tec protein_coding nonsense_mediated_decay MGP_CBAJ_T0071684.1 MGP_CBAJ_G0029286.1 mouse_genomes_project 5 78154656 78262692 - MGP_CBAJ_P0071684 Tec protein_coding nonsense_mediated_decay MGP_CBAJ_T0071685.1 MGP_CBAJ_G0029286.1 mouse_genomes_project 5 78209993 78262686 - Tec protein_coding retained_intron MGP_CBAJ_T0071686.1 MGP_CBAJ_G0029286.1 mouse_genomes_project 5 78210297 78231853 - MGP_CBAJ_P0071686 Tec protein_coding protein_coding MGP_CBAJ_T0098412.1 MGP_CBAJ_G0036678.1 mouse_genomes_project 5 110279052 110279476 - Gm43514 sense_intronic sense_intronic MGP_CBAJ_T0069830.1 MGP_CBAJ_G0028968.1 mouse_genomes_project 5 16282113 16451782 + MGP_CBAJ_P0069830 Sema3c protein_coding protein_coding MGP_CBAJ_T0069831.1 MGP_CBAJ_G0028968.1 mouse_genomes_project 5 16282481 16400508 + MGP_CBAJ_P0069831 Sema3c protein_coding nonsense_mediated_decay MGP_CBAJ_T0069832.1 MGP_CBAJ_G0028968.1 mouse_genomes_project 5 16282598 16286009 + Sema3c protein_coding retained_intron MGP_CBAJ_T0069833.1 MGP_CBAJ_G0028968.1 mouse_genomes_project 5 16282731 16393596 + MGP_CBAJ_P0069833 Sema3c protein_coding protein_coding MGP_CBAJ_T0069834.1 MGP_CBAJ_G0028968.1 mouse_genomes_project 5 16411725 16451779 + Sema3c protein_coding retained_intron MGP_CBAJ_T0100626.1 MGP_CBAJ_G0038881.1 mouse_genomes_project 5 101450445 101450581 + Gm22915 snoRNA snoRNA MGP_CBAJ_T0014635.1 MGP_CBAJ_G0012747.1 mouse_genomes_project 5 4967152 4968153 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0074835.1 MGP_CBAJ_G0029900.1 mouse_genomes_project 5 153537978 153553180 + MGP_CBAJ_P0074835 Gm20605 protein_coding protein_coding MGP_CBAJ_T0074836.1 MGP_CBAJ_G0029900.1 mouse_genomes_project 5 153538000 153548885 + Gm20605 protein_coding retained_intron MGP_CBAJ_T0074837.1 MGP_CBAJ_G0029900.1 mouse_genomes_project 5 153538009 153549700 + MGP_CBAJ_P0074837 Gm20605 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074839.1 MGP_CBAJ_G0029900.1 mouse_genomes_project 5 153538035 153542745 + MGP_CBAJ_P0074839 Gm20605 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074840.1 MGP_CBAJ_G0029900.1 mouse_genomes_project 5 153538035 153553185 + MGP_CBAJ_P0074840 Gm20605 protein_coding protein_coding MGP_CBAJ_T0074841.1 MGP_CBAJ_G0029900.1 mouse_genomes_project 5 153538987 153552266 + MGP_CBAJ_P0074841 Gm20605 protein_coding protein_coding MGP_CBAJ_T0074842.1 MGP_CBAJ_G0029900.1 mouse_genomes_project 5 153550405 153551449 + MGP_CBAJ_P0074842 Gm20605 protein_coding protein_coding MGP_CBAJ_T0074843.1 MGP_CBAJ_G0029900.1 mouse_genomes_project 5 153551451 153552325 + MGP_CBAJ_P0074843 Gm20605 protein_coding protein_coding MGP_CBAJ_T0001441.1 MGP_CBAJ_G0001364.1 mouse_genomes_project 5 25501681 25503704 - TEC TEC MGP_CBAJ_T0011477.1 MGP_CBAJ_G0009615.1 mouse_genomes_project 5 122665701 122665812 - Gm27602 misc_RNA misc_RNA MGP_CBAJ_T0073046.1 MGP_CBAJ_G0029582.1 mouse_genomes_project 5 125367102 125404874 - MGP_CBAJ_P0073046 Cmklr1 protein_coding protein_coding MGP_CBAJ_T0073047.1 MGP_CBAJ_G0029582.1 mouse_genomes_project 5 125368770 125382269 - MGP_CBAJ_P0073047 Cmklr1 protein_coding protein_coding MGP_CBAJ_T0073048.1 MGP_CBAJ_G0029582.1 mouse_genomes_project 5 125369661 125398058 - MGP_CBAJ_P0073048 Cmklr1 protein_coding protein_coding MGP_CBAJ_T0073049.1 MGP_CBAJ_G0029582.1 mouse_genomes_project 5 125385961 125404844 - Cmklr1 protein_coding processed_transcript MGP_CBAJ_T0001744.1 MGP_CBAJ_G0001662.1 mouse_genomes_project 5 128836829 128838172 - TEC TEC MGP_CBAJ_T0070558.1 MGP_CBAJ_G0029099.1 mouse_genomes_project 5 32669650 32691738 + MGP_CBAJ_P0070558 Fosl2 protein_coding protein_coding MGP_CBAJ_T0070559.1 MGP_CBAJ_G0029099.1 mouse_genomes_project 5 32670022 32673546 + Fosl2 protein_coding retained_intron MGP_CBAJ_T0070560.1 MGP_CBAJ_G0029099.1 mouse_genomes_project 5 32680418 32687609 + Fosl2 protein_coding retained_intron MGP_CBAJ_T0075420.1 MGP_CBAJ_G0030026.1 mouse_genomes_project 5 162510339 162529481 - MGP_CBAJ_P0075420 Ptcd1 protein_coding protein_coding MGP_CBAJ_T0075421.1 MGP_CBAJ_G0030026.1 mouse_genomes_project 5 162527824 162529329 - MGP_CBAJ_P0075421 Ptcd1 protein_coding protein_coding MGP_CBAJ_T0099327.1 MGP_CBAJ_G0037582.1 mouse_genomes_project 5 3814107 3814200 + Gm24686 snRNA snRNA MGP_CBAJ_T0004719.1 MGP_CBAJ_G0004067.1 mouse_genomes_project 5 130513123 130519810 - antisense antisense MGP_CBAJ_T0001576.1 MGP_CBAJ_G0001496.1 mouse_genomes_project 5 61563231 61565335 + TEC TEC MGP_CBAJ_T0001405.1 MGP_CBAJ_G0001329.1 mouse_genomes_project 5 6683144 6683375 + TEC TEC MGP_CBAJ_T0101955.1 MGP_CBAJ_G0039986.1 mouse_genomes_project 5 152721889 152725467 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0014730.1 MGP_CBAJ_G0012842.1 mouse_genomes_project 5 39787570 39787774 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0074218.1 MGP_CBAJ_G0029793.1 mouse_genomes_project 5 144356992 144364052 + MGP_CBAJ_P0074218 Mrps17 protein_coding protein_coding MGP_CBAJ_T0074219.1 MGP_CBAJ_G0029793.1 mouse_genomes_project 5 144356998 144359976 + MGP_CBAJ_P0074219 Mrps17 protein_coding protein_coding MGP_CBAJ_T0074220.1 MGP_CBAJ_G0029793.1 mouse_genomes_project 5 144356999 144359893 + MGP_CBAJ_P0074220 Mrps17 protein_coding protein_coding MGP_CBAJ_T0074221.1 MGP_CBAJ_G0029793.1 mouse_genomes_project 5 144357004 144359515 + MGP_CBAJ_P0074221 Mrps17 protein_coding protein_coding MGP_CBAJ_T0074222.1 MGP_CBAJ_G0029793.1 mouse_genomes_project 5 144357006 144360371 + MGP_CBAJ_P0074222 Mrps17 protein_coding protein_coding MGP_CBAJ_T0074223.1 MGP_CBAJ_G0029793.1 mouse_genomes_project 5 144357011 144360187 + MGP_CBAJ_P0074223 Mrps17 protein_coding protein_coding MGP_CBAJ_T0074224.1 MGP_CBAJ_G0029793.1 mouse_genomes_project 5 144357013 144358841 + Mrps17 protein_coding retained_intron MGP_CBAJ_T0074225.1 MGP_CBAJ_G0029793.1 mouse_genomes_project 5 144357029 144359550 + MGP_CBAJ_P0074225 Mrps17 protein_coding protein_coding MGP_CBAJ_T0074226.1 MGP_CBAJ_G0029793.1 mouse_genomes_project 5 144357053 144359786 + MGP_CBAJ_P0074226 Mrps17 protein_coding protein_coding MGP_CBAJ_T0074227.1 MGP_CBAJ_G0029793.1 mouse_genomes_project 5 144357072 144359943 + MGP_CBAJ_P0074227 Mrps17 protein_coding protein_coding MGP_CBAJ_T0074228.1 MGP_CBAJ_G0029793.1 mouse_genomes_project 5 144357192 144358329 + MGP_CBAJ_P0074228 Mrps17 protein_coding protein_coding MGP_CBAJ_T0073682.1 MGP_CBAJ_G0029705.1 mouse_genomes_project 5 135659143 135701361 - MGP_CBAJ_P0073682 Ccdc63 protein_coding protein_coding MGP_CBAJ_T0073683.1 MGP_CBAJ_G0029705.1 mouse_genomes_project 5 135659173 135662221 - Ccdc63 protein_coding retained_intron MGP_CBAJ_T0073684.1 MGP_CBAJ_G0029705.1 mouse_genomes_project 5 135659188 135698114 - MGP_CBAJ_P0073684 Ccdc63 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073685.1 MGP_CBAJ_G0029705.1 mouse_genomes_project 5 135681505 135692182 - MGP_CBAJ_P0073685 Ccdc63 protein_coding protein_coding MGP_CBAJ_T0073686.1 MGP_CBAJ_G0029705.1 mouse_genomes_project 5 135690076 135692182 - MGP_CBAJ_P0073686 Ccdc63 protein_coding protein_coding MGP_CBAJ_T0073687.1 MGP_CBAJ_G0029705.1 mouse_genomes_project 5 135697735 135702256 - Ccdc63 protein_coding retained_intron MGP_CBAJ_T0073688.1 MGP_CBAJ_G0029705.1 mouse_genomes_project 5 135699417 135704120 - Ccdc63 protein_coding retained_intron MGP_CBAJ_T0001716.1 MGP_CBAJ_G0001634.1 mouse_genomes_project 5 119132622 119134712 - TEC TEC MGP_CBAJ_T0070325.1 MGP_CBAJ_G0029066.1 mouse_genomes_project 5 31223773 31231656 + MGP_CBAJ_P0070325 Emilin1 protein_coding protein_coding MGP_CBAJ_T0070326.1 MGP_CBAJ_G0029066.1 mouse_genomes_project 5 31224110 31231245 + Emilin1 protein_coding retained_intron MGP_CBAJ_T0070327.1 MGP_CBAJ_G0029066.1 mouse_genomes_project 5 31230300 31231429 + Emilin1 protein_coding retained_intron MGP_CBAJ_T0073289.1 MGP_CBAJ_G0029631.1 mouse_genomes_project 5 127476649 127479992 - MGP_CBAJ_P0073289 Cox6a1 protein_coding protein_coding MGP_CBAJ_T0073290.1 MGP_CBAJ_G0029631.1 mouse_genomes_project 5 127476664 127479925 - Cox6a1 protein_coding retained_intron MGP_CBAJ_T0001426.1 MGP_CBAJ_G0001350.1 mouse_genomes_project 5 14591143 14593795 + TEC TEC MGP_CBAJ_T0001455.1 MGP_CBAJ_G0001377.1 mouse_genomes_project 5 32066753 32067384 + TEC TEC MGP_CBAJ_T0074094.1 MGP_CBAJ_G0029768.1 mouse_genomes_project 5 138836055 138865649 - MGP_CBAJ_P0074094 Ccdc92 protein_coding protein_coding MGP_CBAJ_T0074095.1 MGP_CBAJ_G0029768.1 mouse_genomes_project 5 138837530 138865113 - MGP_CBAJ_P0074095 Ccdc92 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074096.1 MGP_CBAJ_G0029768.1 mouse_genomes_project 5 138837706 138854811 - MGP_CBAJ_P0074096 Ccdc92 protein_coding protein_coding MGP_CBAJ_T0014650.1 MGP_CBAJ_G0012762.1 mouse_genomes_project 5 12155243 12155750 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0071952.1 MGP_CBAJ_G0029331.1 mouse_genomes_project 5 91042318 91474963 - MGP_CBAJ_P0071952 Epha5 protein_coding protein_coding MGP_CBAJ_T0071953.1 MGP_CBAJ_G0029331.1 mouse_genomes_project 5 91045348 91474848 - MGP_CBAJ_P0071953 Epha5 protein_coding protein_coding MGP_CBAJ_T0071954.1 MGP_CBAJ_G0029331.1 mouse_genomes_project 5 91045348 91474848 - MGP_CBAJ_P0071954 Epha5 protein_coding protein_coding MGP_CBAJ_T0071955.1 MGP_CBAJ_G0029331.1 mouse_genomes_project 5 91053025 91474848 - MGP_CBAJ_P0071955 Epha5 protein_coding protein_coding MGP_CBAJ_T0071956.1 MGP_CBAJ_G0029331.1 mouse_genomes_project 5 91053025 91475401 - MGP_CBAJ_P0071956 Epha5 protein_coding protein_coding MGP_CBAJ_T0071957.1 MGP_CBAJ_G0029331.1 mouse_genomes_project 5 91053025 91474848 - MGP_CBAJ_P0071957 Epha5 protein_coding protein_coding MGP_CBAJ_T0071958.1 MGP_CBAJ_G0029331.1 mouse_genomes_project 5 91102664 91474963 - Epha5 protein_coding retained_intron MGP_CBAJ_T0071959.1 MGP_CBAJ_G0029331.1 mouse_genomes_project 5 91156106 91474963 - Epha5 protein_coding retained_intron MGP_CBAJ_T0071960.1 MGP_CBAJ_G0029331.1 mouse_genomes_project 5 91259927 91475424 - Epha5 protein_coding retained_intron MGP_CBAJ_T0071961.1 MGP_CBAJ_G0029331.1 mouse_genomes_project 5 91368904 91475424 - Epha5 protein_coding retained_intron MGP_CBAJ_T0071962.1 MGP_CBAJ_G0029331.1 mouse_genomes_project 5 91412136 91415815 - Epha5 protein_coding retained_intron MGP_CBAJ_T0001856.1 MGP_CBAJ_G0001772.1 mouse_genomes_project 5 158059450 158060131 - TEC TEC MGP_CBAJ_T0001689.1 MGP_CBAJ_G0001607.1 mouse_genomes_project 5 107116501 107118932 + TEC TEC MGP_CBAJ_T0014746.1 MGP_CBAJ_G0012858.1 mouse_genomes_project 5 50278729 50279027 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0073535.1 MGP_CBAJ_G0029677.1 mouse_genomes_project 5 133818028 133849459 - MGP_CBAJ_P0073535 Oas3 protein_coding protein_coding MGP_CBAJ_T0073536.1 MGP_CBAJ_G0029677.1 mouse_genomes_project 5 133819146 133821190 - MGP_CBAJ_P0073536 Oas3 protein_coding protein_coding MGP_CBAJ_T0073537.1 MGP_CBAJ_G0029677.1 mouse_genomes_project 5 133820329 133822586 - Oas3 protein_coding retained_intron MGP_CBAJ_T0073538.1 MGP_CBAJ_G0029677.1 mouse_genomes_project 5 133831488 133849438 - Oas3 protein_coding retained_intron MGP_CBAJ_T0099370.1 MGP_CBAJ_G0037625.1 mouse_genomes_project 5 93573971 93574078 - Gm25473 snRNA snRNA MGP_CBAJ_T0072086.1 MGP_CBAJ_G0029376.1 mouse_genomes_project 5 96257395 96266047 - Jchain protein_coding retained_intron MGP_CBAJ_T0072087.1 MGP_CBAJ_G0029376.1 mouse_genomes_project 5 96259925 96268379 - MGP_CBAJ_P0072087 Jchain protein_coding protein_coding MGP_CBAJ_T0072407.1 MGP_CBAJ_G0029452.1 mouse_genomes_project 5 109376059 109408999 + MGP_CBAJ_P0072407 Enoph1 protein_coding protein_coding MGP_CBAJ_T0072408.1 MGP_CBAJ_G0029452.1 mouse_genomes_project 5 109376118 109408999 + MGP_CBAJ_P0072408 Enoph1 protein_coding protein_coding MGP_CBAJ_T0072409.1 MGP_CBAJ_G0029452.1 mouse_genomes_project 5 109376142 109401626 + Enoph1 protein_coding retained_intron MGP_CBAJ_T0072410.1 MGP_CBAJ_G0029452.1 mouse_genomes_project 5 109402240 109404437 + Enoph1 protein_coding processed_transcript MGP_CBAJ_T0069635.1 MGP_CBAJ_G0028934.1 mouse_genomes_project 5 2749415 2782858 - Cldn12 protein_coding processed_transcript MGP_CBAJ_T0069636.1 MGP_CBAJ_G0028934.1 mouse_genomes_project 5 2771104 2782735 - MGP_CBAJ_P0069636 Cldn12 protein_coding protein_coding MGP_CBAJ_T0069637.1 MGP_CBAJ_G0028934.1 mouse_genomes_project 5 2771198 2782819 - MGP_CBAJ_P0069637 Cldn12 protein_coding protein_coding MGP_CBAJ_T0069638.1 MGP_CBAJ_G0028934.1 mouse_genomes_project 5 2771200 2782771 - MGP_CBAJ_P0069638 Cldn12 protein_coding protein_coding MGP_CBAJ_T0069639.1 MGP_CBAJ_G0028934.1 mouse_genomes_project 5 2771312 2782676 - MGP_CBAJ_P0069639 Cldn12 protein_coding protein_coding MGP_CBAJ_T0069640.1 MGP_CBAJ_G0028934.1 mouse_genomes_project 5 2774497 2782735 - MGP_CBAJ_P0069640 Cldn12 protein_coding protein_coding MGP_CBAJ_T0069641.1 MGP_CBAJ_G0028934.1 mouse_genomes_project 5 2778988 2782904 - Cldn12 protein_coding processed_transcript MGP_CBAJ_T0069642.1 MGP_CBAJ_G0028934.1 mouse_genomes_project 5 2781116 2782392 - Cldn12 protein_coding processed_transcript MGP_CBAJ_T0069984.1 MGP_CBAJ_G0028997.1 mouse_genomes_project 5 23342813 23347615 - MGP_CBAJ_P0069984 Tomm7 protein_coding protein_coding MGP_CBAJ_T0072220.1 MGP_CBAJ_G0029412.1 mouse_genomes_project 5 100349338 100427568 + MGP_CBAJ_P0072220 Uso1 protein_coding protein_coding MGP_CBAJ_T0072221.1 MGP_CBAJ_G0029412.1 mouse_genomes_project 5 100349346 100427571 + MGP_CBAJ_P0072221 Uso1 protein_coding protein_coding MGP_CBAJ_T0072222.1 MGP_CBAJ_G0029412.1 mouse_genomes_project 5 100349347 100405688 + Uso1 protein_coding retained_intron MGP_CBAJ_T0072223.1 MGP_CBAJ_G0029412.1 mouse_genomes_project 5 100349366 100427569 + MGP_CBAJ_P0072223 Uso1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072224.1 MGP_CBAJ_G0029412.1 mouse_genomes_project 5 100403021 100427548 + Uso1 protein_coding processed_transcript MGP_CBAJ_T0071307.1 MGP_CBAJ_G0029223.1 mouse_genomes_project 5 56381167 56602361 + MGP_CBAJ_P0071307 Rbpj protein_coding protein_coding MGP_CBAJ_T0071308.1 MGP_CBAJ_G0029223.1 mouse_genomes_project 5 56486716 56488247 + Rbpj protein_coding retained_intron MGP_CBAJ_T0071309.1 MGP_CBAJ_G0029223.1 mouse_genomes_project 5 56486844 56619128 + MGP_CBAJ_P0071309 Rbpj protein_coding protein_coding MGP_CBAJ_T0071310.1 MGP_CBAJ_G0029223.1 mouse_genomes_project 5 56532647 56619132 + MGP_CBAJ_P0071310 Rbpj protein_coding protein_coding MGP_CBAJ_T0071311.1 MGP_CBAJ_G0029223.1 mouse_genomes_project 5 56532801 56619132 + MGP_CBAJ_P0071311 Rbpj protein_coding protein_coding MGP_CBAJ_T0071312.1 MGP_CBAJ_G0029223.1 mouse_genomes_project 5 56533138 56610924 + MGP_CBAJ_P0071312 Rbpj protein_coding protein_coding MGP_CBAJ_T0071313.1 MGP_CBAJ_G0029223.1 mouse_genomes_project 5 56563792 56590325 + Rbpj protein_coding processed_transcript MGP_CBAJ_T0071314.1 MGP_CBAJ_G0029223.1 mouse_genomes_project 5 56569270 56586404 + Rbpj protein_coding processed_transcript MGP_CBAJ_T0071315.1 MGP_CBAJ_G0029223.1 mouse_genomes_project 5 56569433 56586404 + Rbpj protein_coding processed_transcript MGP_CBAJ_T0071316.1 MGP_CBAJ_G0029223.1 mouse_genomes_project 5 56583000 56586406 + Rbpj protein_coding retained_intron MGP_CBAJ_T0071317.1 MGP_CBAJ_G0029223.1 mouse_genomes_project 5 56590100 56605150 + Rbpj protein_coding retained_intron MGP_CBAJ_T0007981.1 MGP_CBAJ_G0006503.1 mouse_genomes_project 5 32969631 32977531 - Gm7596 lincRNA lincRNA MGP_CBAJ_T0007982.1 MGP_CBAJ_G0006503.1 mouse_genomes_project 5 32969657 32972927 - Gm7596 lincRNA lincRNA MGP_CBAJ_T0004703.1 MGP_CBAJ_G0004056.1 mouse_genomes_project 5 126937153 126943114 - Gm13822 antisense antisense MGP_CBAJ_T0069783.1 MGP_CBAJ_G0028954.1 mouse_genomes_project 5 7213252 7483236 - MGP_CBAJ_P0069783 Grm3 protein_coding protein_coding MGP_CBAJ_T0004573.1 MGP_CBAJ_G0003958.1 mouse_genomes_project 5 31490157 31491739 - Gm15469 antisense antisense MGP_CBAJ_T0008101.1 MGP_CBAJ_G0006596.1 mouse_genomes_project 5 105790792 105796158 + 1700016F12Rik lincRNA lincRNA MGP_CBAJ_T0014783.1 MGP_CBAJ_G0012895.1 mouse_genomes_project 5 68303463 68303946 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008234.1 MGP_CBAJ_G0006685.1 mouse_genomes_project 5 132362697 132371674 - Gm31314 lincRNA lincRNA MGP_CBAJ_T0100642.1 MGP_CBAJ_G0038897.1 mouse_genomes_project 5 164605683 164605754 + Gm25091 snoRNA snoRNA MGP_CBAJ_T0075496.1 MGP_CBAJ_G0030053.1 mouse_genomes_project 5 164603739 164610964 + MGP_CBAJ_P0075496 Rpl21 protein_coding protein_coding MGP_CBAJ_T0075497.1 MGP_CBAJ_G0030053.1 mouse_genomes_project 5 164603995 164605455 + Rpl21 protein_coding retained_intron MGP_CBAJ_T0075498.1 MGP_CBAJ_G0030053.1 mouse_genomes_project 5 164604044 164609905 + MGP_CBAJ_P0075498 Rpl21 protein_coding protein_coding MGP_CBAJ_T0075499.1 MGP_CBAJ_G0030053.1 mouse_genomes_project 5 164604051 164609906 + MGP_CBAJ_P0075499 Rpl21 protein_coding protein_coding MGP_CBAJ_T0075500.1 MGP_CBAJ_G0030053.1 mouse_genomes_project 5 164605041 164605814 + Rpl21 protein_coding retained_intron MGP_CBAJ_T0075501.1 MGP_CBAJ_G0030053.1 mouse_genomes_project 5 164606055 164609906 + Rpl21 protein_coding retained_intron MGP_CBAJ_T0074017.1 MGP_CBAJ_G0029756.1 mouse_genomes_project 5 138342845 138353150 - MGP_CBAJ_P0074017 protein_coding protein_coding MGP_CBAJ_T0074018.1 MGP_CBAJ_G0029756.1 mouse_genomes_project 5 138344640 138367798 - MGP_CBAJ_P0074018 protein_coding protein_coding MGP_CBAJ_T0098055.1 MGP_CBAJ_G0036328.1 mouse_genomes_project 5 56230916 56231030 - n-R5s172 rRNA rRNA MGP_CBAJ_T0014648.1 MGP_CBAJ_G0012760.1 mouse_genomes_project 5 10736436 10738006 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001577.1 MGP_CBAJ_G0001497.1 mouse_genomes_project 5 61589114 61590169 + TEC TEC MGP_CBAJ_T0070863.1 MGP_CBAJ_G0029147.1 mouse_genomes_project 5 36595606 36613230 - MGP_CBAJ_P0070863 Trmt44 protein_coding protein_coding MGP_CBAJ_T0070864.1 MGP_CBAJ_G0029147.1 mouse_genomes_project 5 36610651 36613211 - Trmt44 protein_coding retained_intron MGP_CBAJ_T0070865.1 MGP_CBAJ_G0029147.1 mouse_genomes_project 5 36610903 36612898 - MGP_CBAJ_P0070865 Trmt44 protein_coding protein_coding MGP_CBAJ_T0001534.1 MGP_CBAJ_G0001454.1 mouse_genomes_project 5 51473937 51476392 - TEC TEC MGP_CBAJ_T0075227.1 MGP_CBAJ_G0029987.1 mouse_genomes_project 5 159978183 159990803 + MGP_CBAJ_P0075227 Fscn1 protein_coding protein_coding MGP_CBAJ_T0075228.1 MGP_CBAJ_G0029987.1 mouse_genomes_project 5 159978216 159990801 + MGP_CBAJ_P0075228 Fscn1 protein_coding protein_coding MGP_CBAJ_T0075229.1 MGP_CBAJ_G0029987.1 mouse_genomes_project 5 159978683 159989786 + MGP_CBAJ_P0075229 Fscn1 protein_coding protein_coding MGP_CBAJ_T0075230.1 MGP_CBAJ_G0029987.1 mouse_genomes_project 5 159980788 159988167 + Fscn1 protein_coding processed_transcript MGP_CBAJ_T0075231.1 MGP_CBAJ_G0029987.1 mouse_genomes_project 5 159981085 159989569 + Fscn1 protein_coding processed_transcript MGP_CBAJ_T0075232.1 MGP_CBAJ_G0029987.1 mouse_genomes_project 5 159982354 159988289 + Fscn1 protein_coding processed_transcript MGP_CBAJ_T0075233.1 MGP_CBAJ_G0029987.1 mouse_genomes_project 5 159987699 159989605 + Fscn1 protein_coding retained_intron MGP_CBAJ_T0100634.1 MGP_CBAJ_G0038889.1 mouse_genomes_project 5 118318622 118318754 + Gm26387 snoRNA snoRNA MGP_CBAJ_T0011465.1 MGP_CBAJ_G0009603.1 mouse_genomes_project 5 32393106 32393408 + Gm24436 misc_RNA misc_RNA MGP_CBAJ_T0101951.1 MGP_CBAJ_G0039982.1 mouse_genomes_project 5 120442619 120449500 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0014782.1 MGP_CBAJ_G0012894.1 mouse_genomes_project 5 67969987 67970447 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0074436.1 MGP_CBAJ_G0029825.1 mouse_genomes_project 5 149906955 149929703 - MGP_CBAJ_P0074436 Eif4h protein_coding protein_coding MGP_CBAJ_T0074437.1 MGP_CBAJ_G0029825.1 mouse_genomes_project 5 149907111 149929560 - MGP_CBAJ_P0074437 Eif4h protein_coding protein_coding MGP_CBAJ_T0074438.1 MGP_CBAJ_G0029825.1 mouse_genomes_project 5 149911095 149929538 - Eif4h protein_coding retained_intron MGP_CBAJ_T0074439.1 MGP_CBAJ_G0029825.1 mouse_genomes_project 5 149912098 149929515 - Eif4h protein_coding retained_intron MGP_CBAJ_T0074440.1 MGP_CBAJ_G0029825.1 mouse_genomes_project 5 149927674 149929523 - Eif4h protein_coding retained_intron MGP_CBAJ_T0001710.1 MGP_CBAJ_G0001628.1 mouse_genomes_project 5 117467481 117469565 - TEC TEC MGP_CBAJ_T0070224.1 MGP_CBAJ_G0029050.1 mouse_genomes_project 5 30369628 30406339 - MGP_CBAJ_P0070224 Hadha protein_coding protein_coding MGP_CBAJ_T0070225.1 MGP_CBAJ_G0029050.1 mouse_genomes_project 5 30370750 30406153 - Hadha protein_coding processed_transcript MGP_CBAJ_T0070226.1 MGP_CBAJ_G0029050.1 mouse_genomes_project 5 30371223 30371630 - Hadha protein_coding processed_transcript MGP_CBAJ_T0070227.1 MGP_CBAJ_G0029050.1 mouse_genomes_project 5 30372793 30378444 - Hadha protein_coding retained_intron MGP_CBAJ_T0070228.1 MGP_CBAJ_G0029050.1 mouse_genomes_project 5 30378060 30386368 - MGP_CBAJ_P0070228 Hadha protein_coding nonsense_mediated_decay MGP_CBAJ_T0070229.1 MGP_CBAJ_G0029050.1 mouse_genomes_project 5 30380039 30392353 - Hadha protein_coding retained_intron MGP_CBAJ_T0070230.1 MGP_CBAJ_G0029050.1 mouse_genomes_project 5 30384560 30406139 - Hadha protein_coding retained_intron MGP_CBAJ_T0070231.1 MGP_CBAJ_G0029050.1 mouse_genomes_project 5 30398409 30400869 - Hadha protein_coding retained_intron MGP_CBAJ_T0070232.1 MGP_CBAJ_G0029050.1 mouse_genomes_project 5 30405098 30406167 - Hadha protein_coding retained_intron MGP_CBAJ_T0014958.1 MGP_CBAJ_G0013070.1 mouse_genomes_project 5 155711444 155713275 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0072081.1 MGP_CBAJ_G0029373.1 mouse_genomes_project 5 96103564 96113233 + MGP_CBAJ_P0072081 Amtn protein_coding protein_coding MGP_CBAJ_T0004746.1 MGP_CBAJ_G0004085.1 mouse_genomes_project 5 137231406 137235722 - Gm15747 antisense antisense MGP_CBAJ_T0004747.1 MGP_CBAJ_G0004085.1 mouse_genomes_project 5 137231417 137232823 - Gm15747 antisense antisense MGP_CBAJ_T0070223.1 MGP_CBAJ_G0029049.1 mouse_genomes_project 5 30356447 30369703 + MGP_CBAJ_P0070223 Gareml protein_coding protein_coding MGP_CBAJ_T0008152.1 MGP_CBAJ_G0006633.1 mouse_genomes_project 5 116735204 116813578 - Gm28050 lincRNA lincRNA MGP_CBAJ_T0008153.1 MGP_CBAJ_G0006633.1 mouse_genomes_project 5 116796587 116813581 - Gm28050 lincRNA lincRNA MGP_CBAJ_T0071612.1 MGP_CBAJ_G0029273.1 mouse_genomes_project 5 74631159 74648842 - MGP_CBAJ_P0071612 Gnpda2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071613.1 MGP_CBAJ_G0029273.1 mouse_genomes_project 5 74633052 74650406 - MGP_CBAJ_P0071613 Gnpda2 protein_coding protein_coding MGP_CBAJ_T0071614.1 MGP_CBAJ_G0029273.1 mouse_genomes_project 5 74633221 74648878 - MGP_CBAJ_P0071614 Gnpda2 protein_coding protein_coding MGP_CBAJ_T0071615.1 MGP_CBAJ_G0029273.1 mouse_genomes_project 5 74633226 74650312 - Gnpda2 protein_coding retained_intron MGP_CBAJ_T0071616.1 MGP_CBAJ_G0029273.1 mouse_genomes_project 5 74633863 74650340 - MGP_CBAJ_P0071616 Gnpda2 protein_coding protein_coding MGP_CBAJ_T0071617.1 MGP_CBAJ_G0029273.1 mouse_genomes_project 5 74634793 74650359 - MGP_CBAJ_P0071617 Gnpda2 protein_coding protein_coding MGP_CBAJ_T0071618.1 MGP_CBAJ_G0029273.1 mouse_genomes_project 5 74643050 74650355 - MGP_CBAJ_P0071618 Gnpda2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0014678.1 MGP_CBAJ_G0012790.1 mouse_genomes_project 5 22297444 22298054 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014999.1 MGP_CBAJ_G0013111.1 mouse_genomes_project 5 168991229 168996195 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001634.1 MGP_CBAJ_G0001553.1 mouse_genomes_project 5 74199345 74200922 - TEC TEC MGP_CBAJ_T0001579.1 MGP_CBAJ_G0001499.1 mouse_genomes_project 5 61739603 61743095 + TEC TEC MGP_CBAJ_T0007984.1 MGP_CBAJ_G0006505.1 mouse_genomes_project 5 34193913 34194753 - Gm43851 lincRNA lincRNA MGP_CBAJ_T0014752.1 MGP_CBAJ_G0012864.1 mouse_genomes_project 5 53520622 53521187 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099346.1 MGP_CBAJ_G0037601.1 mouse_genomes_project 5 39829662 39829798 + Gm22249 snRNA snRNA MGP_CBAJ_T0010587.1 MGP_CBAJ_G0008725.1 mouse_genomes_project 5 133990380 133990506 - Gm22907 miRNA miRNA MGP_CBAJ_T0071897.1 MGP_CBAJ_G0029323.1 mouse_genomes_project 5 83047970 83063682 - MGP_CBAJ_P0071897 Hopx protein_coding protein_coding MGP_CBAJ_T0071898.1 MGP_CBAJ_G0029323.1 mouse_genomes_project 5 83047970 83086230 - MGP_CBAJ_P0071898 Hopx protein_coding protein_coding MGP_CBAJ_T0071899.1 MGP_CBAJ_G0029323.1 mouse_genomes_project 5 83047970 83063658 - MGP_CBAJ_P0071899 Hopx protein_coding protein_coding MGP_CBAJ_T0001836.1 MGP_CBAJ_G0001753.1 mouse_genomes_project 5 149265723 149266689 - TEC TEC MGP_CBAJ_T0001812.1 MGP_CBAJ_G0001729.1 mouse_genomes_project 5 146559990 146561741 - TEC TEC MGP_CBAJ_T0008071.1 MGP_CBAJ_G0006570.1 mouse_genomes_project 5 81536861 81542171 - Gm43100 lincRNA lincRNA MGP_CBAJ_T0008128.1 MGP_CBAJ_G0006615.1 mouse_genomes_project 5 110386006 110389709 - Gm36793 lincRNA lincRNA MGP_CBAJ_T0071822.1 MGP_CBAJ_G0029311.1 mouse_genomes_project 5 82035079 82141119 - MGP_CBAJ_P0071822 Clock protein_coding protein_coding MGP_CBAJ_T0071823.1 MGP_CBAJ_G0029311.1 mouse_genomes_project 5 82037357 82140875 - MGP_CBAJ_P0071823 Clock protein_coding protein_coding MGP_CBAJ_T0071824.1 MGP_CBAJ_G0029311.1 mouse_genomes_project 5 82039033 82104096 - MGP_CBAJ_P0071824 Clock protein_coding protein_coding MGP_CBAJ_T0071825.1 MGP_CBAJ_G0029311.1 mouse_genomes_project 5 82060614 82141081 - Clock protein_coding retained_intron MGP_CBAJ_T0071826.1 MGP_CBAJ_G0029311.1 mouse_genomes_project 5 82082749 82141099 - Clock protein_coding processed_transcript MGP_CBAJ_T0071827.1 MGP_CBAJ_G0029311.1 mouse_genomes_project 5 82102037 82141099 - Clock protein_coding retained_intron MGP_CBAJ_T0008132.1 MGP_CBAJ_G0006619.1 mouse_genomes_project 5 111689280 111690845 + Gm29707 lincRNA lincRNA MGP_CBAJ_T0008133.1 MGP_CBAJ_G0006619.1 mouse_genomes_project 5 111689912 111690403 + Gm29707 lincRNA lincRNA MGP_CBAJ_T0070529.1 MGP_CBAJ_G0029096.1 mouse_genomes_project 5 32082481 32154498 + Mrpl33 protein_coding processed_transcript MGP_CBAJ_T0070530.1 MGP_CBAJ_G0029096.1 mouse_genomes_project 5 32084292 32119379 + Mrpl33 protein_coding processed_transcript MGP_CBAJ_T0070531.1 MGP_CBAJ_G0029096.1 mouse_genomes_project 5 32101350 32119379 + MGP_CBAJ_P0070531 Mrpl33 protein_coding protein_coding MGP_CBAJ_T0070532.1 MGP_CBAJ_G0029096.1 mouse_genomes_project 5 32101367 32138451 + Mrpl33 protein_coding processed_transcript MGP_CBAJ_T0070533.1 MGP_CBAJ_G0029096.1 mouse_genomes_project 5 32101383 32154498 + Mrpl33 protein_coding processed_transcript MGP_CBAJ_T0070534.1 MGP_CBAJ_G0029096.1 mouse_genomes_project 5 32101396 32164021 + MGP_CBAJ_P0070534 Mrpl33 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070535.1 MGP_CBAJ_G0029096.1 mouse_genomes_project 5 32101424 32119377 + Mrpl33 protein_coding retained_intron MGP_CBAJ_T0070536.1 MGP_CBAJ_G0029096.1 mouse_genomes_project 5 32101428 32119372 + Mrpl33 protein_coding processed_transcript MGP_CBAJ_T0070537.1 MGP_CBAJ_G0029096.1 mouse_genomes_project 5 32101563 32119307 + Mrpl33 protein_coding retained_intron MGP_CBAJ_T0070540.1 MGP_CBAJ_G0029096.1 mouse_genomes_project 5 32154261 32157767 + Mrpl33 protein_coding processed_transcript MGP_CBAJ_T0070541.1 MGP_CBAJ_G0029096.1 mouse_genomes_project 5 32155132 32163068 + Mrpl33 protein_coding processed_transcript MGP_CBAJ_T0001787.1 MGP_CBAJ_G0001705.1 mouse_genomes_project 5 138439181 138444341 + TEC TEC MGP_CBAJ_T0001788.1 MGP_CBAJ_G0001705.1 mouse_genomes_project 5 138443297 138444470 + TEC TEC MGP_CBAJ_T0070131.1 MGP_CBAJ_G0029027.1 mouse_genomes_project 5 25504120 25520119 - MGP_CBAJ_P0070131 Xrcc2 protein_coding protein_coding MGP_CBAJ_T0070132.1 MGP_CBAJ_G0029027.1 mouse_genomes_project 5 25506359 25507747 - Xrcc2 protein_coding processed_transcript MGP_CBAJ_T0070133.1 MGP_CBAJ_G0029027.1 mouse_genomes_project 5 25510242 25520067 - MGP_CBAJ_P0070133 Xrcc2 protein_coding protein_coding MGP_CBAJ_T0070134.1 MGP_CBAJ_G0029027.1 mouse_genomes_project 5 25511000 25520058 - Xrcc2 protein_coding retained_intron MGP_CBAJ_T0001451.1 MGP_CBAJ_G0001374.1 mouse_genomes_project 5 31440380 31442739 + TEC TEC MGP_CBAJ_T0001452.1 MGP_CBAJ_G0001374.1 mouse_genomes_project 5 31440382 31442739 + TEC TEC MGP_CBAJ_T0071739.1 MGP_CBAJ_G0029296.1 mouse_genomes_project 5 79166820 79193015 - MGP_CBAJ_P0071739 Lrrc66 protein_coding protein_coding MGP_CBAJ_T0071740.1 MGP_CBAJ_G0029296.1 mouse_genomes_project 5 79190174 79190811 - MGP_CBAJ_P0071740 Lrrc66 protein_coding protein_coding MGP_CBAJ_T0097823.1 MGP_CBAJ_G0036096.1 mouse_genomes_project 5 151109823 151110205 - pseudogene pseudogene MGP_CBAJ_T0008121.1 MGP_CBAJ_G0006612.1 mouse_genomes_project 5 109552401 109556514 + Gm9932 lincRNA lincRNA MGP_CBAJ_T0070158.1 MGP_CBAJ_G0029035.1 mouse_genomes_project 5 28179340 28185785 + MGP_CBAJ_P0070158 En2 protein_coding protein_coding MGP_CBAJ_T0001486.1 MGP_CBAJ_G0001407.1 mouse_genomes_project 5 45343277 45347545 + TEC TEC MGP_CBAJ_T0008337.1 MGP_CBAJ_G0006754.1 mouse_genomes_project 5 164562951 164573582 + Gm43741 lincRNA lincRNA MGP_CBAJ_T0017959.1 MGP_CBAJ_G0015363.1 mouse_genomes_project 5 169954668 169970623 + processed_transcript retained_intron MGP_CBAJ_T0017960.1 MGP_CBAJ_G0015363.1 mouse_genomes_project 5 169954702 169984587 + processed_transcript lincRNA MGP_CBAJ_T0017961.1 MGP_CBAJ_G0015363.1 mouse_genomes_project 5 169954711 170002429 + processed_transcript lincRNA MGP_CBAJ_T0017962.1 MGP_CBAJ_G0015363.1 mouse_genomes_project 5 169988566 170002222 + processed_transcript lincRNA MGP_CBAJ_T0017963.1 MGP_CBAJ_G0015363.1 mouse_genomes_project 5 169994926 170020409 + processed_transcript lincRNA MGP_CBAJ_T0017964.1 MGP_CBAJ_G0015363.1 mouse_genomes_project 5 169994948 170018809 + processed_transcript lincRNA MGP_CBAJ_T0071843.1 MGP_CBAJ_G0029315.1 mouse_genomes_project 5 82474080 82543566 + Cep135 protein_coding retained_intron MGP_CBAJ_T0071844.1 MGP_CBAJ_G0029315.1 mouse_genomes_project 5 82474083 82545124 + MGP_CBAJ_P0071844 Cep135 protein_coding protein_coding MGP_CBAJ_T0071845.1 MGP_CBAJ_G0029315.1 mouse_genomes_project 5 82477096 82545123 + MGP_CBAJ_P0071845 Cep135 protein_coding protein_coding MGP_CBAJ_T0004642.1 MGP_CBAJ_G0004014.1 mouse_genomes_project 5 88485649 88492167 - Gm16054 antisense antisense MGP_CBAJ_T0008380.1 MGP_CBAJ_G0006785.1 mouse_genomes_project 5 169839881 169846497 + Gm42904 lincRNA lincRNA MGP_CBAJ_T0069843.1 MGP_CBAJ_G0028972.1 mouse_genomes_project 5 18130596 19774558 + MGP_CBAJ_P0069843 Magi2 protein_coding protein_coding MGP_CBAJ_T0069844.1 MGP_CBAJ_G0028972.1 mouse_genomes_project 5 18130606 18760633 + Magi2 protein_coding processed_transcript MGP_CBAJ_T0069845.1 MGP_CBAJ_G0028972.1 mouse_genomes_project 5 18130611 19774542 + MGP_CBAJ_P0069845 Magi2 protein_coding protein_coding MGP_CBAJ_T0069846.1 MGP_CBAJ_G0028972.1 mouse_genomes_project 5 18130615 19776412 + MGP_CBAJ_P0069846 Magi2 protein_coding protein_coding MGP_CBAJ_T0069847.1 MGP_CBAJ_G0028972.1 mouse_genomes_project 5 18130957 18136160 + Magi2 protein_coding retained_intron MGP_CBAJ_T0069848.1 MGP_CBAJ_G0028972.1 mouse_genomes_project 5 18896186 19208147 + MGP_CBAJ_P0069848 Magi2 protein_coding protein_coding MGP_CBAJ_T0069849.1 MGP_CBAJ_G0028972.1 mouse_genomes_project 5 19054207 19773765 + MGP_CBAJ_P0069849 Magi2 protein_coding protein_coding MGP_CBAJ_T0069850.1 MGP_CBAJ_G0028972.1 mouse_genomes_project 5 19215631 19487843 + Magi2 protein_coding processed_transcript MGP_CBAJ_T0069851.1 MGP_CBAJ_G0028972.1 mouse_genomes_project 5 19239521 19700160 + Magi2 protein_coding retained_intron MGP_CBAJ_T0069852.1 MGP_CBAJ_G0028972.1 mouse_genomes_project 5 19556316 19641840 + Magi2 protein_coding processed_transcript MGP_CBAJ_T0069853.1 MGP_CBAJ_G0028972.1 mouse_genomes_project 5 19643526 19773992 + MGP_CBAJ_P0069853 Magi2 protein_coding protein_coding MGP_CBAJ_T0069854.1 MGP_CBAJ_G0028972.1 mouse_genomes_project 5 19773307 19774442 + Magi2 protein_coding processed_transcript MGP_CBAJ_T0014708.1 MGP_CBAJ_G0012820.1 mouse_genomes_project 5 30032200 30033420 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0075481.1 MGP_CBAJ_G0030049.1 mouse_genomes_project 5 163899309 163980845 + MGP_CBAJ_P0075481 Cdk8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075482.1 MGP_CBAJ_G0030049.1 mouse_genomes_project 5 163899464 163943350 + MGP_CBAJ_P0075482 Cdk8 protein_coding protein_coding MGP_CBAJ_T0075483.1 MGP_CBAJ_G0030049.1 mouse_genomes_project 5 163899772 163976789 + MGP_CBAJ_P0075483 Cdk8 protein_coding protein_coding MGP_CBAJ_T0075484.1 MGP_CBAJ_G0030049.1 mouse_genomes_project 5 163925796 163927991 + Cdk8 protein_coding retained_intron MGP_CBAJ_T0075485.1 MGP_CBAJ_G0030049.1 mouse_genomes_project 5 163963380 163967252 + Cdk8 protein_coding processed_transcript MGP_CBAJ_T0075486.1 MGP_CBAJ_G0030049.1 mouse_genomes_project 5 163969993 163980790 + Cdk8 protein_coding retained_intron MGP_CBAJ_T0075487.1 MGP_CBAJ_G0030049.1 mouse_genomes_project 5 163971448 163974596 + Cdk8 protein_coding retained_intron MGP_CBAJ_T0073379.1 MGP_CBAJ_G0029643.1 mouse_genomes_project 5 128393818 128581694 - MGP_CBAJ_P0073379 Ccdc60 protein_coding protein_coding MGP_CBAJ_T0073380.1 MGP_CBAJ_G0029643.1 mouse_genomes_project 5 128445445 128581672 - MGP_CBAJ_P0073380 Ccdc60 protein_coding protein_coding MGP_CBAJ_T0008035.1 MGP_CBAJ_G0006543.1 mouse_genomes_project 5 62096441 62105919 - 4930459L07Rik lincRNA lincRNA MGP_CBAJ_T0014903.1 MGP_CBAJ_G0013015.1 mouse_genomes_project 5 122032021 122033713 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004780.1 MGP_CBAJ_G0004110.1 mouse_genomes_project 5 151867795 152014894 + Gm16599 antisense antisense MGP_CBAJ_T0014881.1 MGP_CBAJ_G0012993.1 mouse_genomes_project 5 116849475 116850217 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0070376.1 MGP_CBAJ_G0029074.1 mouse_genomes_project 5 31431562 31438792 - MGP_CBAJ_P0070376 Slc30a3 protein_coding protein_coding MGP_CBAJ_T0070377.1 MGP_CBAJ_G0029074.1 mouse_genomes_project 5 31432847 31433792 - MGP_CBAJ_P0070377 Slc30a3 protein_coding protein_coding MGP_CBAJ_T0070378.1 MGP_CBAJ_G0029074.1 mouse_genomes_project 5 31434217 31438904 - MGP_CBAJ_P0070378 Slc30a3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070379.1 MGP_CBAJ_G0029074.1 mouse_genomes_project 5 31434775 31440198 - MGP_CBAJ_P0070379 Slc30a3 protein_coding protein_coding MGP_CBAJ_T0070380.1 MGP_CBAJ_G0029074.1 mouse_genomes_project 5 31434811 31456409 - MGP_CBAJ_P0070380 Slc30a3 protein_coding protein_coding MGP_CBAJ_T0070268.1 MGP_CBAJ_G0029058.1 mouse_genomes_project 5 30879108 30916647 + MGP_CBAJ_P0070268 Kcnk3 protein_coding protein_coding MGP_CBAJ_T0070269.1 MGP_CBAJ_G0029058.1 mouse_genomes_project 5 30912750 30913610 + Kcnk3 protein_coding processed_transcript MGP_CBAJ_T0071224.1 MGP_CBAJ_G0029208.1 mouse_genomes_project 5 50662002 50711426 + 5730480H06Rik protein_coding processed_transcript MGP_CBAJ_T0071225.1 MGP_CBAJ_G0029208.1 mouse_genomes_project 5 50703546 50720050 + MGP_CBAJ_P0071225 5730480H06Rik protein_coding protein_coding MGP_CBAJ_T0071226.1 MGP_CBAJ_G0029208.1 mouse_genomes_project 5 50703546 50720050 + MGP_CBAJ_P0071226 5730480H06Rik protein_coding protein_coding MGP_CBAJ_T0071227.1 MGP_CBAJ_G0029208.1 mouse_genomes_project 5 50703650 50720051 + MGP_CBAJ_P0071227 5730480H06Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0071228.1 MGP_CBAJ_G0029208.1 mouse_genomes_project 5 50705654 50726822 + MGP_CBAJ_P0071228 5730480H06Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0071229.1 MGP_CBAJ_G0029208.1 mouse_genomes_project 5 50711339 50719761 + 5730480H06Rik protein_coding retained_intron MGP_CBAJ_T0071237.1 MGP_CBAJ_G0029208.1 mouse_genomes_project 5 50724041 50729446 + 5730480H06Rik protein_coding retained_intron MGP_CBAJ_T0071238.1 MGP_CBAJ_G0029208.1 mouse_genomes_project 5 50726781 50745704 + 5730480H06Rik protein_coding retained_intron MGP_CBAJ_T0071240.1 MGP_CBAJ_G0029208.1 mouse_genomes_project 5 50727868 50745733 + 5730480H06Rik protein_coding processed_transcript MGP_CBAJ_T0073506.1 MGP_CBAJ_G0029670.1 mouse_genomes_project 5 133615685 133640497 + MGP_CBAJ_P0073506 Iqcd protein_coding protein_coding MGP_CBAJ_T0073507.1 MGP_CBAJ_G0029670.1 mouse_genomes_project 5 133615692 133640501 + MGP_CBAJ_P0073507 Iqcd protein_coding protein_coding MGP_CBAJ_T0074803.1 MGP_CBAJ_G0029896.1 mouse_genomes_project 5 153466659 153489079 + MGP_CBAJ_P0074803 Tfr2 protein_coding protein_coding MGP_CBAJ_T0074804.1 MGP_CBAJ_G0029896.1 mouse_genomes_project 5 153466670 153489081 + MGP_CBAJ_P0074804 Tfr2 protein_coding protein_coding MGP_CBAJ_T0074805.1 MGP_CBAJ_G0029896.1 mouse_genomes_project 5 153466683 153468182 + Tfr2 protein_coding retained_intron MGP_CBAJ_T0074806.1 MGP_CBAJ_G0029896.1 mouse_genomes_project 5 153466688 153489079 + MGP_CBAJ_P0074806 Tfr2 protein_coding protein_coding MGP_CBAJ_T0074807.1 MGP_CBAJ_G0029896.1 mouse_genomes_project 5 153467539 153489065 + MGP_CBAJ_P0074807 Tfr2 protein_coding protein_coding MGP_CBAJ_T0074808.1 MGP_CBAJ_G0029896.1 mouse_genomes_project 5 153467624 153489076 + MGP_CBAJ_P0074808 Tfr2 protein_coding protein_coding MGP_CBAJ_T0074809.1 MGP_CBAJ_G0029896.1 mouse_genomes_project 5 153468270 153475269 + Tfr2 protein_coding retained_intron MGP_CBAJ_T0074810.1 MGP_CBAJ_G0029896.1 mouse_genomes_project 5 153475361 153478595 + Tfr2 protein_coding retained_intron MGP_CBAJ_T0074811.1 MGP_CBAJ_G0029896.1 mouse_genomes_project 5 153479807 153481747 + MGP_CBAJ_P0074811 Tfr2 protein_coding protein_coding MGP_CBAJ_T0074812.1 MGP_CBAJ_G0029896.1 mouse_genomes_project 5 153484831 153488589 + Tfr2 protein_coding retained_intron MGP_CBAJ_T0074813.1 MGP_CBAJ_G0029896.1 mouse_genomes_project 5 153484831 153485656 + Tfr2 protein_coding retained_intron MGP_CBAJ_T0070606.1 MGP_CBAJ_G0029109.1 mouse_genomes_project 5 33935951 33955911 - Spon2 protein_coding retained_intron MGP_CBAJ_T0070607.1 MGP_CBAJ_G0029109.1 mouse_genomes_project 5 33953888 33958417 - MGP_CBAJ_P0070607 Spon2 protein_coding protein_coding MGP_CBAJ_T0070608.1 MGP_CBAJ_G0029109.1 mouse_genomes_project 5 33953895 33958147 - Spon2 protein_coding retained_intron MGP_CBAJ_T0070609.1 MGP_CBAJ_G0029109.1 mouse_genomes_project 5 33953896 33955922 - Spon2 protein_coding retained_intron MGP_CBAJ_T0070610.1 MGP_CBAJ_G0029109.1 mouse_genomes_project 5 33956390 33958157 - MGP_CBAJ_P0070610 Spon2 protein_coding protein_coding MGP_CBAJ_T0001725.1 MGP_CBAJ_G0001643.1 mouse_genomes_project 5 124226306 124227607 + TEC TEC MGP_CBAJ_T0098058.1 MGP_CBAJ_G0036331.1 mouse_genomes_project 5 81807675 81807798 - Gm24738 rRNA rRNA MGP_CBAJ_T0074903.1 MGP_CBAJ_G0029919.1 mouse_genomes_project 5 154094515 154122642 + MGP_CBAJ_P0074903 Zkscan1 protein_coding protein_coding MGP_CBAJ_T0074904.1 MGP_CBAJ_G0029919.1 mouse_genomes_project 5 154094515 154122642 + MGP_CBAJ_P0074904 Zkscan1 protein_coding protein_coding MGP_CBAJ_T0074905.1 MGP_CBAJ_G0029919.1 mouse_genomes_project 5 154094551 154119318 + MGP_CBAJ_P0074905 Zkscan1 protein_coding protein_coding MGP_CBAJ_T0074906.1 MGP_CBAJ_G0029919.1 mouse_genomes_project 5 154106840 154119317 + MGP_CBAJ_P0074906 Zkscan1 protein_coding protein_coding MGP_CBAJ_T0099358.1 MGP_CBAJ_G0037613.1 mouse_genomes_project 5 75712020 75712127 - Gm26072 snRNA snRNA MGP_CBAJ_T0071273.1 MGP_CBAJ_G0029218.1 mouse_genomes_project 5 55562090 55614034 + Zcchc4 protein_coding processed_transcript MGP_CBAJ_T0071274.1 MGP_CBAJ_G0029218.1 mouse_genomes_project 5 55569732 55613777 + MGP_CBAJ_P0071274 Zcchc4 protein_coding protein_coding MGP_CBAJ_T0071275.1 MGP_CBAJ_G0029218.1 mouse_genomes_project 5 55569732 55614871 + MGP_CBAJ_P0071275 Zcchc4 protein_coding protein_coding MGP_CBAJ_T0071276.1 MGP_CBAJ_G0029218.1 mouse_genomes_project 5 55569764 55586849 + Zcchc4 protein_coding retained_intron MGP_CBAJ_T0071277.1 MGP_CBAJ_G0029218.1 mouse_genomes_project 5 55569794 55582780 + MGP_CBAJ_P0071277 Zcchc4 protein_coding protein_coding MGP_CBAJ_T0071278.1 MGP_CBAJ_G0029218.1 mouse_genomes_project 5 55569800 55582812 + Zcchc4 protein_coding processed_transcript MGP_CBAJ_T0071279.1 MGP_CBAJ_G0029218.1 mouse_genomes_project 5 55584710 55609390 + Zcchc4 protein_coding processed_transcript MGP_CBAJ_T0071280.1 MGP_CBAJ_G0029218.1 mouse_genomes_project 5 55590809 55606086 + Zcchc4 protein_coding retained_intron MGP_CBAJ_T0010550.1 MGP_CBAJ_G0008688.1 mouse_genomes_project 5 35670166 35670272 - miRNA miRNA MGP_CBAJ_T0014773.1 MGP_CBAJ_G0012885.1 mouse_genomes_project 5 63858430 63858624 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011702.1 MGP_CBAJ_G0009819.1 mouse_genomes_project 5 100628981 100638728 - MGP_CBAJ_P0011702 Cxcl11 polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0011703.1 MGP_CBAJ_G0009819.1 mouse_genomes_project 5 100628984 100632736 - MGP_CBAJ_P0011703 Cxcl11 polymorphic_pseudogene protein_coding MGP_CBAJ_T0014955.1 MGP_CBAJ_G0013067.1 mouse_genomes_project 5 154565357 154565561 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0072555.1 MGP_CBAJ_G0029482.1 mouse_genomes_project 5 114159512 114180687 + MGP_CBAJ_P0072555 Mepe protein_coding protein_coding MGP_CBAJ_T0001515.1 MGP_CBAJ_G0001436.1 mouse_genomes_project 5 50367162 50369760 + TEC TEC MGP_CBAJ_T0001613.1 MGP_CBAJ_G0001532.1 mouse_genomes_project 5 70998415 71000420 - TEC TEC MGP_CBAJ_T0101131.1 MGP_CBAJ_G0039324.1 mouse_genomes_project 5 53240268 53244051 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0072556.1 MGP_CBAJ_G0029483.1 mouse_genomes_project 5 114308697 114314630 + MGP_CBAJ_P0072556 Spp1 protein_coding protein_coding MGP_CBAJ_T0072557.1 MGP_CBAJ_G0029483.1 mouse_genomes_project 5 114308697 114314628 + MGP_CBAJ_P0072557 Spp1 protein_coding protein_coding MGP_CBAJ_T0072558.1 MGP_CBAJ_G0029483.1 mouse_genomes_project 5 114308700 114314627 + MGP_CBAJ_P0072558 Spp1 protein_coding protein_coding MGP_CBAJ_T0072559.1 MGP_CBAJ_G0029483.1 mouse_genomes_project 5 114308718 114313116 + MGP_CBAJ_P0072559 Spp1 protein_coding protein_coding MGP_CBAJ_T0072560.1 MGP_CBAJ_G0029483.1 mouse_genomes_project 5 114308721 114313078 + MGP_CBAJ_P0072560 Spp1 protein_coding protein_coding MGP_CBAJ_T0072561.1 MGP_CBAJ_G0029483.1 mouse_genomes_project 5 114308737 114311276 + MGP_CBAJ_P0072561 Spp1 protein_coding protein_coding MGP_CBAJ_T0072562.1 MGP_CBAJ_G0029483.1 mouse_genomes_project 5 114309757 114314623 + MGP_CBAJ_P0072562 Spp1 protein_coding protein_coding MGP_CBAJ_T0008288.1 MGP_CBAJ_G0006718.1 mouse_genomes_project 5 142912190 142915457 + Gm42495 lincRNA lincRNA MGP_CBAJ_T0004554.1 MGP_CBAJ_G0003943.1 mouse_genomes_project 5 14465020 14468993 - Gm43000 antisense antisense MGP_CBAJ_T0101128.1 MGP_CBAJ_G0039322.1 mouse_genomes_project 5 33877245 33878407 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101129.1 MGP_CBAJ_G0039322.1 mouse_genomes_project 5 33877932 33878719 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0004567.1 MGP_CBAJ_G0003954.1 mouse_genomes_project 5 27501084 27502409 - Gm16058 antisense antisense MGP_CBAJ_T0070725.1 MGP_CBAJ_G0029127.1 mouse_genomes_project 5 35030098 35031552 - Mxd4 protein_coding processed_transcript MGP_CBAJ_T0070726.1 MGP_CBAJ_G0029127.1 mouse_genomes_project 5 35030102 35043945 - MGP_CBAJ_P0070726 Mxd4 protein_coding protein_coding MGP_CBAJ_T0070727.1 MGP_CBAJ_G0029127.1 mouse_genomes_project 5 35032814 35043955 - MGP_CBAJ_P0070727 Mxd4 protein_coding protein_coding MGP_CBAJ_T0070728.1 MGP_CBAJ_G0029127.1 mouse_genomes_project 5 35035980 35040608 - Mxd4 protein_coding retained_intron MGP_CBAJ_T0014961.1 MGP_CBAJ_G0013073.1 mouse_genomes_project 5 157116210 157116684 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101935.1 MGP_CBAJ_G0039966.1 mouse_genomes_project 5 94262783 94267404 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0074778.1 MGP_CBAJ_G0029891.1 mouse_genomes_project 5 153364071 153366868 - MGP_CBAJ_P0074778 Epo protein_coding protein_coding MGP_CBAJ_T0074779.1 MGP_CBAJ_G0029891.1 mouse_genomes_project 5 153364071 153426773 - MGP_CBAJ_P0074779 Epo protein_coding protein_coding MGP_CBAJ_T0074780.1 MGP_CBAJ_G0029891.1 mouse_genomes_project 5 153364077 153366868 - MGP_CBAJ_P0074780 Epo protein_coding protein_coding MGP_CBAJ_T0001526.1 MGP_CBAJ_G0001447.1 mouse_genomes_project 5 51305117 51308896 - TEC TEC MGP_CBAJ_T0001527.1 MGP_CBAJ_G0001447.1 mouse_genomes_project 5 51308016 51308390 - TEC pseudogene MGP_CBAJ_T0011469.1 MGP_CBAJ_G0009607.1 mouse_genomes_project 5 97562001 97562325 + Gm25320 misc_RNA misc_RNA MGP_CBAJ_T0071407.1 MGP_CBAJ_G0029243.1 mouse_genomes_project 5 69761808 69844032 - MGP_CBAJ_P0071407 Rfc1 protein_coding protein_coding MGP_CBAJ_T0071408.1 MGP_CBAJ_G0029243.1 mouse_genomes_project 5 69761810 69844089 - MGP_CBAJ_P0071408 Rfc1 protein_coding protein_coding MGP_CBAJ_T0071409.1 MGP_CBAJ_G0029243.1 mouse_genomes_project 5 69761810 69844138 - MGP_CBAJ_P0071409 Rfc1 protein_coding protein_coding MGP_CBAJ_T0071410.1 MGP_CBAJ_G0029243.1 mouse_genomes_project 5 69762560 69844086 - MGP_CBAJ_P0071410 Rfc1 protein_coding protein_coding MGP_CBAJ_T0071411.1 MGP_CBAJ_G0029243.1 mouse_genomes_project 5 69763034 69769059 - MGP_CBAJ_P0071411 Rfc1 protein_coding protein_coding MGP_CBAJ_T0071412.1 MGP_CBAJ_G0029243.1 mouse_genomes_project 5 69764204 69773563 - Rfc1 protein_coding retained_intron MGP_CBAJ_T0071413.1 MGP_CBAJ_G0029243.1 mouse_genomes_project 5 69811707 69844081 - Rfc1 protein_coding retained_intron MGP_CBAJ_T0014810.1 MGP_CBAJ_G0012922.1 mouse_genomes_project 5 80993805 80994133 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014935.1 MGP_CBAJ_G0013047.1 mouse_genomes_project 5 144884829 144885231 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0071046.1 MGP_CBAJ_G0029178.1 mouse_genomes_project 5 39587685 39593509 + MGP_CBAJ_P0071046 Drd5 protein_coding protein_coding MGP_CBAJ_T0073127.1 MGP_CBAJ_G0029598.1 mouse_genomes_project 5 126163132 126263328 + MGP_CBAJ_P0073127 Myo1h protein_coding protein_coding MGP_CBAJ_T0073128.1 MGP_CBAJ_G0029598.1 mouse_genomes_project 5 126201512 126263107 + MGP_CBAJ_P0073128 Myo1h protein_coding protein_coding MGP_CBAJ_T0073129.1 MGP_CBAJ_G0029598.1 mouse_genomes_project 5 126201512 126264669 + MGP_CBAJ_P0073129 Myo1h protein_coding protein_coding MGP_CBAJ_T0073130.1 MGP_CBAJ_G0029598.1 mouse_genomes_project 5 126256914 126264669 + Myo1h protein_coding retained_intron MGP_CBAJ_T0073131.1 MGP_CBAJ_G0029598.1 mouse_genomes_project 5 126256962 126263413 + Myo1h protein_coding retained_intron MGP_CBAJ_T0073132.1 MGP_CBAJ_G0029598.1 mouse_genomes_project 5 126256962 126263413 + MGP_CBAJ_P0073132 Myo1h protein_coding protein_coding MGP_CBAJ_T0073133.1 MGP_CBAJ_G0029598.1 mouse_genomes_project 5 126256962 126263413 + MGP_CBAJ_P0073133 Myo1h protein_coding protein_coding MGP_CBAJ_T0073134.1 MGP_CBAJ_G0029598.1 mouse_genomes_project 5 126256962 126263413 + MGP_CBAJ_P0073134 Myo1h protein_coding protein_coding MGP_CBAJ_T0073135.1 MGP_CBAJ_G0029598.1 mouse_genomes_project 5 126257505 126259835 + Myo1h protein_coding retained_intron MGP_CBAJ_T0073136.1 MGP_CBAJ_G0029598.1 mouse_genomes_project 5 126263507 126265450 + Myo1h protein_coding processed_transcript MGP_CBAJ_T0074768.1 MGP_CBAJ_G0029889.1 mouse_genomes_project 5 153194690 153219213 + MGP_CBAJ_P0074768 Ephb4 protein_coding protein_coding MGP_CBAJ_T0074769.1 MGP_CBAJ_G0029889.1 mouse_genomes_project 5 153194722 153223392 + MGP_CBAJ_P0074769 Ephb4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074770.1 MGP_CBAJ_G0029889.1 mouse_genomes_project 5 153194753 153219207 + MGP_CBAJ_P0074770 Ephb4 protein_coding protein_coding MGP_CBAJ_T0074771.1 MGP_CBAJ_G0029889.1 mouse_genomes_project 5 153195011 153218997 + MGP_CBAJ_P0074771 Ephb4 protein_coding protein_coding MGP_CBAJ_T0074772.1 MGP_CBAJ_G0029889.1 mouse_genomes_project 5 153195094 153219217 + MGP_CBAJ_P0074772 Ephb4 protein_coding protein_coding MGP_CBAJ_T0004583.1 MGP_CBAJ_G0003967.1 mouse_genomes_project 5 35616841 35648751 - Gm42560 antisense antisense MGP_CBAJ_T0014940.1 MGP_CBAJ_G0013052.1 mouse_genomes_project 5 151101540 151101898 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014840.1 MGP_CBAJ_G0012952.1 mouse_genomes_project 5 96147513 96148062 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100625.1 MGP_CBAJ_G0038880.1 mouse_genomes_project 5 100414804 100414948 + Gm25290 snoRNA snoRNA MGP_CBAJ_T0001767.1 MGP_CBAJ_G0001685.1 mouse_genomes_project 5 135193448 135198870 + TEC TEC MGP_CBAJ_T0099403.1 MGP_CBAJ_G0037658.1 mouse_genomes_project 5 154259993 154260071 + Gm22956 snRNA snRNA MGP_CBAJ_T0071481.1 MGP_CBAJ_G0029254.1 mouse_genomes_project 5 70552327 70591301 + MGP_CBAJ_P0071481 Chrna9 protein_coding protein_coding MGP_CBAJ_T0071482.1 MGP_CBAJ_G0029254.1 mouse_genomes_project 5 70552334 70593379 + MGP_CBAJ_P0071482 Chrna9 protein_coding protein_coding MGP_CBAJ_T0071483.1 MGP_CBAJ_G0029254.1 mouse_genomes_project 5 70552354 70553321 + Chrna9 protein_coding retained_intron MGP_CBAJ_T0071484.1 MGP_CBAJ_G0029254.1 mouse_genomes_project 5 70552379 70564962 + Chrna9 protein_coding processed_transcript MGP_CBAJ_T0071485.1 MGP_CBAJ_G0029254.1 mouse_genomes_project 5 70552381 70564978 + Chrna9 protein_coding processed_transcript MGP_CBAJ_T0071486.1 MGP_CBAJ_G0029254.1 mouse_genomes_project 5 70589264 70601943 + MGP_CBAJ_P0071486 Chrna9 protein_coding protein_coding MGP_CBAJ_T0071487.1 MGP_CBAJ_G0029254.1 mouse_genomes_project 5 70600512 70601757 + Chrna9 protein_coding processed_transcript MGP_CBAJ_T0008290.1 MGP_CBAJ_G0006720.1 mouse_genomes_project 5 142988877 142990374 - 4930573I07Rik lincRNA lincRNA MGP_CBAJ_T0008291.1 MGP_CBAJ_G0006720.1 mouse_genomes_project 5 142988879 142990397 - 4930573I07Rik lincRNA lincRNA MGP_CBAJ_T0072201.1 MGP_CBAJ_G0029409.1 mouse_genomes_project 5 100176834 100179655 + Gm1045 protein_coding retained_intron MGP_CBAJ_T0072202.1 MGP_CBAJ_G0029409.1 mouse_genomes_project 5 100176834 100185551 + MGP_CBAJ_P0072202 Gm1045 protein_coding protein_coding MGP_CBAJ_T0073861.1 MGP_CBAJ_G0029731.1 mouse_genomes_project 5 137056185 137147983 + MGP_CBAJ_P0073861 Wdr66 protein_coding protein_coding MGP_CBAJ_T0073862.1 MGP_CBAJ_G0029731.1 mouse_genomes_project 5 137057597 137147293 + MGP_CBAJ_P0073862 Wdr66 protein_coding protein_coding MGP_CBAJ_T0073863.1 MGP_CBAJ_G0029731.1 mouse_genomes_project 5 137084219 137110439 + Wdr66 protein_coding retained_intron MGP_CBAJ_T0073864.1 MGP_CBAJ_G0029731.1 mouse_genomes_project 5 137084219 137106445 + MGP_CBAJ_P0073864 Wdr66 protein_coding protein_coding MGP_CBAJ_T0073865.1 MGP_CBAJ_G0029731.1 mouse_genomes_project 5 137086093 137110390 + Wdr66 protein_coding retained_intron MGP_CBAJ_T0073866.1 MGP_CBAJ_G0029731.1 mouse_genomes_project 5 137090749 137092203 + Wdr66 protein_coding retained_intron MGP_CBAJ_T0073867.1 MGP_CBAJ_G0029731.1 mouse_genomes_project 5 137102663 137147293 + MGP_CBAJ_P0073867 Wdr66 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073868.1 MGP_CBAJ_G0029731.1 mouse_genomes_project 5 137106531 137147129 + MGP_CBAJ_P0073868 Wdr66 protein_coding protein_coding MGP_CBAJ_T0073869.1 MGP_CBAJ_G0029731.1 mouse_genomes_project 5 137117967 137147148 + Wdr66 protein_coding retained_intron MGP_CBAJ_T0004543.1 MGP_CBAJ_G0003933.1 mouse_genomes_project 5 460257 461705 - Gm42435 antisense antisense MGP_CBAJ_T0017902.1 MGP_CBAJ_G0015344.1 mouse_genomes_project 5 72263070 72270008 + C330024D21Rik processed_transcript retained_intron MGP_CBAJ_T0017903.1 MGP_CBAJ_G0015344.1 mouse_genomes_project 5 72263073 72278994 + C330024D21Rik processed_transcript lincRNA MGP_CBAJ_T0017904.1 MGP_CBAJ_G0015344.1 mouse_genomes_project 5 72263076 72278660 + C330024D21Rik processed_transcript lincRNA MGP_CBAJ_T0099380.1 MGP_CBAJ_G0037635.1 mouse_genomes_project 5 113694223 113694330 + Gm24897 snRNA snRNA MGP_CBAJ_T0001860.1 MGP_CBAJ_G0001776.1 mouse_genomes_project 5 160518315 160520560 - TEC pseudogene MGP_CBAJ_T0014816.1 MGP_CBAJ_G0012928.1 mouse_genomes_project 5 82654763 82655204 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0073592.1 MGP_CBAJ_G0029692.1 mouse_genomes_project 5 134854309 134857647 - MGP_CBAJ_P0073592 protein_coding protein_coding MGP_CBAJ_T0073113.1 MGP_CBAJ_G0029595.1 mouse_genomes_project 5 125959192 125968112 + MGP_CBAJ_P0073113 Ung protein_coding protein_coding MGP_CBAJ_T0073114.1 MGP_CBAJ_G0029595.1 mouse_genomes_project 5 125960035 125967176 + MGP_CBAJ_P0073114 Ung protein_coding protein_coding MGP_CBAJ_T0073115.1 MGP_CBAJ_G0029595.1 mouse_genomes_project 5 125960035 125967178 + MGP_CBAJ_P0073115 Ung protein_coding nonsense_mediated_decay MGP_CBAJ_T0073116.1 MGP_CBAJ_G0029595.1 mouse_genomes_project 5 125960813 125967103 + MGP_CBAJ_P0073116 Ung protein_coding protein_coding MGP_CBAJ_T0073117.1 MGP_CBAJ_G0029595.1 mouse_genomes_project 5 125960885 125963974 + Ung protein_coding retained_intron MGP_CBAJ_T0001564.1 MGP_CBAJ_G0001484.1 mouse_genomes_project 5 58996284 58999988 - TEC TEC MGP_CBAJ_T0004717.1 MGP_CBAJ_G0004066.1 mouse_genomes_project 5 129799555 129800303 - Gm10399 antisense antisense MGP_CBAJ_T0004718.1 MGP_CBAJ_G0004066.1 mouse_genomes_project 5 129799803 129800301 - Gm10399 antisense antisense MGP_CBAJ_T0014912.1 MGP_CBAJ_G0013024.1 mouse_genomes_project 5 126806075 126806695 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0073005.1 MGP_CBAJ_G0029575.1 mouse_genomes_project 5 124539362 124681004 - MGP_CBAJ_P0073005 Adrbk2 protein_coding protein_coding MGP_CBAJ_T0073006.1 MGP_CBAJ_G0029575.1 mouse_genomes_project 5 124541478 124681004 - MGP_CBAJ_P0073006 Adrbk2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073007.1 MGP_CBAJ_G0029575.1 mouse_genomes_project 5 124544997 124553259 - Adrbk2 protein_coding retained_intron MGP_CBAJ_T0073008.1 MGP_CBAJ_G0029575.1 mouse_genomes_project 5 124546613 124681281 - MGP_CBAJ_P0073008 Adrbk2 protein_coding protein_coding MGP_CBAJ_T0073009.1 MGP_CBAJ_G0029575.1 mouse_genomes_project 5 124548945 124554691 - Adrbk2 protein_coding retained_intron MGP_CBAJ_T0073010.1 MGP_CBAJ_G0029575.1 mouse_genomes_project 5 124600106 124680993 - MGP_CBAJ_P0073010 Adrbk2 protein_coding protein_coding MGP_CBAJ_T0070135.1 MGP_CBAJ_G0029028.1 mouse_genomes_project 5 25576675 25679511 + MGP_CBAJ_P0070135 Actr3b protein_coding protein_coding MGP_CBAJ_T0070136.1 MGP_CBAJ_G0029028.1 mouse_genomes_project 5 25576759 25594713 + Actr3b protein_coding processed_transcript MGP_CBAJ_T0014966.1 MGP_CBAJ_G0013078.1 mouse_genomes_project 5 160102680 160102900 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0074463.1 MGP_CBAJ_G0029832.1 mouse_genomes_project 5 150345335 150346594 + MGP_CBAJ_P0074463 Cldn3 protein_coding protein_coding MGP_CBAJ_T0014765.1 MGP_CBAJ_G0012877.1 mouse_genomes_project 5 60877262 60878706 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001834.1 MGP_CBAJ_G0001751.1 mouse_genomes_project 5 147839170 147839458 + TEC TEC MGP_CBAJ_T0014699.1 MGP_CBAJ_G0012811.1 mouse_genomes_project 5 26906984 26908666 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008320.1 MGP_CBAJ_G0006740.1 mouse_genomes_project 5 156465250 156474055 + Gm42423 lincRNA lincRNA MGP_CBAJ_T0071177.1 MGP_CBAJ_G0029203.1 mouse_genomes_project 5 47587290 47592562 + MGP_CBAJ_P0071177 Med28 protein_coding protein_coding MGP_CBAJ_T0071178.1 MGP_CBAJ_G0029203.1 mouse_genomes_project 5 47587321 47596253 + MGP_CBAJ_P0071178 Med28 protein_coding protein_coding MGP_CBAJ_T0071179.1 MGP_CBAJ_G0029203.1 mouse_genomes_project 5 47588002 47592569 + Med28 protein_coding processed_transcript MGP_CBAJ_T0071180.1 MGP_CBAJ_G0029203.1 mouse_genomes_project 5 47589126 47592142 + Med28 protein_coding retained_intron MGP_CBAJ_T0010567.1 MGP_CBAJ_G0008705.1 mouse_genomes_project 5 89599245 89599405 - Mir1187 miRNA miRNA MGP_CBAJ_T0075142.1 MGP_CBAJ_G0029970.1 mouse_genomes_project 5 157314558 157318738 - MGP_CBAJ_P0075142 Ttyh3 protein_coding protein_coding MGP_CBAJ_T0075143.1 MGP_CBAJ_G0029970.1 mouse_genomes_project 5 157314931 157342701 - MGP_CBAJ_P0075143 Ttyh3 protein_coding protein_coding MGP_CBAJ_T0075144.1 MGP_CBAJ_G0029970.1 mouse_genomes_project 5 157322587 157323059 - Ttyh3 protein_coding retained_intron MGP_CBAJ_T0075145.1 MGP_CBAJ_G0029970.1 mouse_genomes_project 5 157322968 157330318 - Ttyh3 protein_coding retained_intron MGP_CBAJ_T0075146.1 MGP_CBAJ_G0029970.1 mouse_genomes_project 5 157342344 157342871 - Ttyh3 protein_coding processed_transcript MGP_CBAJ_T0073974.1 MGP_CBAJ_G0029750.1 mouse_genomes_project 5 138023721 138061315 - MGP_CBAJ_P0073974 Abcb9 protein_coding protein_coding MGP_CBAJ_T0073975.1 MGP_CBAJ_G0029750.1 mouse_genomes_project 5 138024614 138044629 - Abcb9 protein_coding retained_intron MGP_CBAJ_T0073976.1 MGP_CBAJ_G0029750.1 mouse_genomes_project 5 138037201 138055808 - MGP_CBAJ_P0073976 Abcb9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073977.1 MGP_CBAJ_G0029750.1 mouse_genomes_project 5 138037205 138055808 - MGP_CBAJ_P0073977 Abcb9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073978.1 MGP_CBAJ_G0029750.1 mouse_genomes_project 5 138041616 138045318 - Abcb9 protein_coding processed_transcript MGP_CBAJ_T0073979.1 MGP_CBAJ_G0029750.1 mouse_genomes_project 5 138053480 138061303 - Abcb9 protein_coding retained_intron MGP_CBAJ_T0001717.1 MGP_CBAJ_G0001635.1 mouse_genomes_project 5 122351415 122351968 + TEC TEC MGP_CBAJ_T0074309.1 MGP_CBAJ_G0029811.1 mouse_genomes_project 5 145107127 145115698 - A330070K13Rik protein_coding antisense MGP_CBAJ_T0074310.1 MGP_CBAJ_G0029811.1 mouse_genomes_project 5 145107200 145115699 - MGP_CBAJ_P0074310 A330070K13Rik protein_coding protein_coding MGP_CBAJ_T0008087.1 MGP_CBAJ_G0006582.1 mouse_genomes_project 5 91488968 91492778 + Gm43532 lincRNA lincRNA MGP_CBAJ_T0014948.1 MGP_CBAJ_G0013060.1 mouse_genomes_project 5 153510650 153511142 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001407.1 MGP_CBAJ_G0001331.1 mouse_genomes_project 5 8645692 8650541 - TEC TEC MGP_CBAJ_T0073884.1 MGP_CBAJ_G0029736.1 mouse_genomes_project 5 137380310 137381733 + MGP_CBAJ_P0073884 B3gnt4 protein_coding protein_coding MGP_CBAJ_T0008229.1 MGP_CBAJ_G0006680.1 mouse_genomes_project 5 131623306 131627634 - lincRNA lincRNA MGP_CBAJ_T0070866.1 MGP_CBAJ_G0029148.1 mouse_genomes_project 5 36624114 36661673 + MGP_CBAJ_P0070866 Acox3 protein_coding protein_coding MGP_CBAJ_T0070867.1 MGP_CBAJ_G0029148.1 mouse_genomes_project 5 36624125 36660479 + MGP_CBAJ_P0070867 Acox3 protein_coding protein_coding MGP_CBAJ_T0070868.1 MGP_CBAJ_G0029148.1 mouse_genomes_project 5 36624152 36629747 + MGP_CBAJ_P0070868 Acox3 protein_coding protein_coding MGP_CBAJ_T0070869.1 MGP_CBAJ_G0029148.1 mouse_genomes_project 5 36624153 36663232 + MGP_CBAJ_P0070869 Acox3 protein_coding protein_coding MGP_CBAJ_T0070870.1 MGP_CBAJ_G0029148.1 mouse_genomes_project 5 36624166 36628442 + Acox3 protein_coding retained_intron MGP_CBAJ_T0070871.1 MGP_CBAJ_G0029148.1 mouse_genomes_project 5 36624176 36659748 + MGP_CBAJ_P0070871 Acox3 protein_coding protein_coding MGP_CBAJ_T0070872.1 MGP_CBAJ_G0029148.1 mouse_genomes_project 5 36624597 36659741 + MGP_CBAJ_P0070872 Acox3 protein_coding protein_coding MGP_CBAJ_T0070873.1 MGP_CBAJ_G0029148.1 mouse_genomes_project 5 36646141 36656207 + MGP_CBAJ_P0070873 Acox3 protein_coding protein_coding MGP_CBAJ_T0070874.1 MGP_CBAJ_G0029148.1 mouse_genomes_project 5 36651455 36657792 + Acox3 protein_coding retained_intron MGP_CBAJ_T0070875.1 MGP_CBAJ_G0029148.1 mouse_genomes_project 5 36657971 36659759 + Acox3 protein_coding retained_intron MGP_CBAJ_T0001559.1 MGP_CBAJ_G0001479.1 mouse_genomes_project 5 55298338 55300740 - TEC TEC MGP_CBAJ_T0008274.1 MGP_CBAJ_G0006708.1 mouse_genomes_project 5 140751375 140752501 - Gm42592 lincRNA lincRNA MGP_CBAJ_T0070961.1 MGP_CBAJ_G0029165.1 mouse_genomes_project 5 38201877 38272610 + MGP_CBAJ_P0070961 Jakmip1 protein_coding protein_coding MGP_CBAJ_T0070962.1 MGP_CBAJ_G0029165.1 mouse_genomes_project 5 38202652 38266473 + Jakmip1 protein_coding processed_transcript MGP_CBAJ_T0070963.1 MGP_CBAJ_G0029165.1 mouse_genomes_project 5 38203407 38272706 + MGP_CBAJ_P0070963 Jakmip1 protein_coding protein_coding MGP_CBAJ_T0070964.1 MGP_CBAJ_G0029165.1 mouse_genomes_project 5 38203427 38272405 + MGP_CBAJ_P0070964 Jakmip1 protein_coding protein_coding MGP_CBAJ_T0070965.1 MGP_CBAJ_G0029165.1 mouse_genomes_project 5 38220568 38266493 + Jakmip1 protein_coding processed_transcript MGP_CBAJ_T0070966.1 MGP_CBAJ_G0029165.1 mouse_genomes_project 5 38220966 38268118 + Jakmip1 protein_coding retained_intron MGP_CBAJ_T0070967.1 MGP_CBAJ_G0029165.1 mouse_genomes_project 5 38221007 38292346 + MGP_CBAJ_P0070967 Jakmip1 protein_coding protein_coding MGP_CBAJ_T0070968.1 MGP_CBAJ_G0029165.1 mouse_genomes_project 5 38224389 38315267 + MGP_CBAJ_P0070968 Jakmip1 protein_coding protein_coding MGP_CBAJ_T0070969.1 MGP_CBAJ_G0029165.1 mouse_genomes_project 5 38224448 38268401 + Jakmip1 protein_coding retained_intron MGP_CBAJ_T0070970.1 MGP_CBAJ_G0029165.1 mouse_genomes_project 5 38266532 38339092 + MGP_CBAJ_P0070970 Jakmip1 protein_coding protein_coding MGP_CBAJ_T0070971.1 MGP_CBAJ_G0029165.1 mouse_genomes_project 5 38266532 38339092 + MGP_CBAJ_P0070971 Jakmip1 protein_coding protein_coding MGP_CBAJ_T0070972.1 MGP_CBAJ_G0029165.1 mouse_genomes_project 5 38272242 38273192 + Jakmip1 protein_coding retained_intron MGP_CBAJ_T0070973.1 MGP_CBAJ_G0029165.1 mouse_genomes_project 5 38312945 38314994 + Jakmip1 protein_coding retained_intron MGP_CBAJ_T0070974.1 MGP_CBAJ_G0029165.1 mouse_genomes_project 5 38316193 38342383 + MGP_CBAJ_P0070974 Jakmip1 protein_coding unknown_likely_coding MGP_CBAJ_T0101931.1 MGP_CBAJ_G0039962.1 mouse_genomes_project 5 52734063 52923813 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0072082.1 MGP_CBAJ_G0029374.1 mouse_genomes_project 5 96183006 96194702 + MGP_CBAJ_P0072082 Ambn protein_coding protein_coding MGP_CBAJ_T0072083.1 MGP_CBAJ_G0029374.1 mouse_genomes_project 5 96183026 96195051 + MGP_CBAJ_P0072083 Ambn protein_coding protein_coding MGP_CBAJ_T0008030.1 MGP_CBAJ_G0006538.1 mouse_genomes_project 5 55369577 55381045 - 8030423F21Rik lincRNA lincRNA MGP_CBAJ_T0099397.1 MGP_CBAJ_G0037652.1 mouse_genomes_project 5 138696319 138696417 - Gm24854 snRNA snRNA MGP_CBAJ_T0001448.1 MGP_CBAJ_G0001371.1 mouse_genomes_project 5 30158772 30162773 - TEC TEC MGP_CBAJ_T0098400.1 MGP_CBAJ_G0036666.1 mouse_genomes_project 5 2552662 2555291 - Gm43727 sense_intronic sense_intronic MGP_CBAJ_T0098417.1 MGP_CBAJ_G0036683.1 mouse_genomes_project 5 136016684 136019259 + Gm42829 sense_intronic sense_intronic MGP_CBAJ_T0072738.1 MGP_CBAJ_G0029518.1 mouse_genomes_project 5 118761737 118773225 + MGP_CBAJ_P0072738 Dr1 protein_coding protein_coding MGP_CBAJ_T0072739.1 MGP_CBAJ_G0029518.1 mouse_genomes_project 5 118769619 118771314 + Dr1 protein_coding processed_transcript MGP_CBAJ_T0074260.1 MGP_CBAJ_G0029801.1 mouse_genomes_project 5 144665214 144683380 - MGP_CBAJ_P0074260 Gusb protein_coding protein_coding MGP_CBAJ_T0074261.1 MGP_CBAJ_G0029801.1 mouse_genomes_project 5 144665226 144683159 - MGP_CBAJ_P0074261 Gusb protein_coding nonsense_mediated_decay MGP_CBAJ_T0074262.1 MGP_CBAJ_G0029801.1 mouse_genomes_project 5 144665784 144666846 - Gusb protein_coding retained_intron MGP_CBAJ_T0074263.1 MGP_CBAJ_G0029801.1 mouse_genomes_project 5 144678986 144683196 - MGP_CBAJ_P0074263 Gusb protein_coding protein_coding MGP_CBAJ_T0074264.1 MGP_CBAJ_G0029801.1 mouse_genomes_project 5 144679926 144683212 - MGP_CBAJ_P0074264 Gusb protein_coding protein_coding MGP_CBAJ_T0074265.1 MGP_CBAJ_G0029801.1 mouse_genomes_project 5 144679949 144683296 - Gusb protein_coding retained_intron MGP_CBAJ_T0070955.1 MGP_CBAJ_G0029163.1 mouse_genomes_project 5 38031148 38118735 + MGP_CBAJ_P0070955 Ppp2r2c protein_coding protein_coding MGP_CBAJ_T0070956.1 MGP_CBAJ_G0029163.1 mouse_genomes_project 5 38031298 38094313 + MGP_CBAJ_P0070956 Ppp2r2c protein_coding protein_coding MGP_CBAJ_T0070957.1 MGP_CBAJ_G0029163.1 mouse_genomes_project 5 38102297 38103055 + Ppp2r2c protein_coding processed_transcript MGP_CBAJ_T0014646.1 MGP_CBAJ_G0012758.1 mouse_genomes_project 5 8599740 8599996 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0074088.1 MGP_CBAJ_G0029767.1 mouse_genomes_project 5 138704325 138835941 + MGP_CBAJ_P0074088 Dnah10 protein_coding protein_coding MGP_CBAJ_T0074089.1 MGP_CBAJ_G0029767.1 mouse_genomes_project 5 138704325 138835946 + MGP_CBAJ_P0074089 Dnah10 protein_coding protein_coding MGP_CBAJ_T0074090.1 MGP_CBAJ_G0029767.1 mouse_genomes_project 5 138786252 138786683 + Dnah10 protein_coding processed_transcript MGP_CBAJ_T0074091.1 MGP_CBAJ_G0029767.1 mouse_genomes_project 5 138791083 138795585 + Dnah10 protein_coding processed_transcript MGP_CBAJ_T0074092.1 MGP_CBAJ_G0029767.1 mouse_genomes_project 5 138800709 138803933 + Dnah10 protein_coding retained_intron MGP_CBAJ_T0074093.1 MGP_CBAJ_G0029767.1 mouse_genomes_project 5 138804584 138835763 + Dnah10 protein_coding retained_intron MGP_CBAJ_T0073027.1 MGP_CBAJ_G0029578.1 mouse_genomes_project 5 124761291 124847251 - MGP_CBAJ_P0073027 2900026A02Rik protein_coding protein_coding MGP_CBAJ_T0073028.1 MGP_CBAJ_G0029578.1 mouse_genomes_project 5 124767388 124819286 - MGP_CBAJ_P0073028 2900026A02Rik protein_coding unknown_likely_coding MGP_CBAJ_T0008374.1 MGP_CBAJ_G0006781.1 mouse_genomes_project 5 169091637 169094116 - Gm43598 lincRNA lincRNA MGP_CBAJ_T0008326.1 MGP_CBAJ_G0006745.1 mouse_genomes_project 5 160372279 160374746 + BC030343 lincRNA lincRNA MGP_CBAJ_T0001674.1 MGP_CBAJ_G0001592.1 mouse_genomes_project 5 98838551 98841684 + TEC TEC MGP_CBAJ_T0014913.1 MGP_CBAJ_G0013025.1 mouse_genomes_project 5 126873254 126873599 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014828.1 MGP_CBAJ_G0012940.1 mouse_genomes_project 5 93305879 93306090 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0071047.1 MGP_CBAJ_G0029179.1 mouse_genomes_project 5 39620171 39752842 - MGP_CBAJ_P0071047 Slc2a9 protein_coding protein_coding MGP_CBAJ_T0071048.1 MGP_CBAJ_G0029179.1 mouse_genomes_project 5 39620171 39755921 - MGP_CBAJ_P0071048 Slc2a9 protein_coding protein_coding MGP_CBAJ_T0071049.1 MGP_CBAJ_G0029179.1 mouse_genomes_project 5 39620172 39769175 - MGP_CBAJ_P0071049 Slc2a9 protein_coding protein_coding MGP_CBAJ_T0071050.1 MGP_CBAJ_G0029179.1 mouse_genomes_project 5 39620204 39779333 - MGP_CBAJ_P0071050 Slc2a9 protein_coding protein_coding MGP_CBAJ_T0071051.1 MGP_CBAJ_G0029179.1 mouse_genomes_project 5 39620382 39752694 - MGP_CBAJ_P0071051 Slc2a9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071052.1 MGP_CBAJ_G0029179.1 mouse_genomes_project 5 39620382 39783252 - MGP_CBAJ_P0071052 Slc2a9 protein_coding protein_coding MGP_CBAJ_T0071053.1 MGP_CBAJ_G0029179.1 mouse_genomes_project 5 39621826 39752667 - MGP_CBAJ_P0071053 Slc2a9 protein_coding protein_coding MGP_CBAJ_T0071054.1 MGP_CBAJ_G0029179.1 mouse_genomes_project 5 39654264 39752718 - MGP_CBAJ_P0071054 Slc2a9 protein_coding protein_coding MGP_CBAJ_T0071055.1 MGP_CBAJ_G0029179.1 mouse_genomes_project 5 39685774 39710973 - Slc2a9 protein_coding processed_transcript MGP_CBAJ_T0071056.1 MGP_CBAJ_G0029179.1 mouse_genomes_project 5 39710793 39779260 - MGP_CBAJ_P0071056 Slc2a9 protein_coding protein_coding MGP_CBAJ_T0071057.1 MGP_CBAJ_G0029179.1 mouse_genomes_project 5 39746383 39779342 - Slc2a9 protein_coding processed_transcript MGP_CBAJ_T0071058.1 MGP_CBAJ_G0029179.1 mouse_genomes_project 5 39755527 39769148 - Slc2a9 protein_coding retained_intron MGP_CBAJ_T0001538.1 MGP_CBAJ_G0001458.1 mouse_genomes_project 5 51521537 51523192 - TEC TEC MGP_CBAJ_T0072660.1 MGP_CBAJ_G0029505.1 mouse_genomes_project 5 117862090 117876593 + MGP_CBAJ_P0072660 protein_coding protein_coding MGP_CBAJ_T0072661.1 MGP_CBAJ_G0029505.1 mouse_genomes_project 5 117862457 117877942 + MGP_CBAJ_P0072661 protein_coding protein_coding MGP_CBAJ_T0072662.1 MGP_CBAJ_G0029505.1 mouse_genomes_project 5 117862488 117872476 + MGP_CBAJ_P0072662 protein_coding protein_coding MGP_CBAJ_T0072663.1 MGP_CBAJ_G0029505.1 mouse_genomes_project 5 117862491 117875594 + MGP_CBAJ_P0072663 protein_coding protein_coding MGP_CBAJ_T0072664.1 MGP_CBAJ_G0029505.1 mouse_genomes_project 5 117869378 117872608 + protein_coding processed_transcript MGP_CBAJ_T0008115.1 MGP_CBAJ_G0006607.1 mouse_genomes_project 5 108497535 108502732 + Gm43252 lincRNA lincRNA MGP_CBAJ_T0004602.1 MGP_CBAJ_G0003981.1 mouse_genomes_project 5 46110674 46131041 + Gm42984 antisense antisense MGP_CBAJ_T0074647.1 MGP_CBAJ_G0029867.1 mouse_genomes_project 5 151715257 151741155 - MGP_CBAJ_P0074647 Orai2 protein_coding protein_coding MGP_CBAJ_T0074648.1 MGP_CBAJ_G0029867.1 mouse_genomes_project 5 151715262 151741070 - MGP_CBAJ_P0074648 Orai2 protein_coding protein_coding MGP_CBAJ_T0074649.1 MGP_CBAJ_G0029867.1 mouse_genomes_project 5 151718190 151741076 - MGP_CBAJ_P0074649 Orai2 protein_coding protein_coding MGP_CBAJ_T0074650.1 MGP_CBAJ_G0029867.1 mouse_genomes_project 5 151733573 151741075 - Orai2 protein_coding retained_intron MGP_CBAJ_T0004742.1 MGP_CBAJ_G0004083.1 mouse_genomes_project 5 137106268 137125709 - Gm15857 antisense antisense MGP_CBAJ_T0001825.1 MGP_CBAJ_G0001742.1 mouse_genomes_project 5 147009031 147016356 - TEC TEC MGP_CBAJ_T0010546.1 MGP_CBAJ_G0008684.1 mouse_genomes_project 5 30939129 30939209 + Mir5625 miRNA miRNA MGP_CBAJ_T0001578.1 MGP_CBAJ_G0001498.1 mouse_genomes_project 5 61655540 61657282 + TEC TEC MGP_CBAJ_T0004550.1 MGP_CBAJ_G0003940.1 mouse_genomes_project 5 12376514 12395459 - Gm4128 antisense antisense MGP_CBAJ_T0001755.1 MGP_CBAJ_G0001673.1 mouse_genomes_project 5 131423387 131426080 + TEC TEC MGP_CBAJ_T0072013.1 MGP_CBAJ_G0029351.1 mouse_genomes_project 5 94914385 94953077 - MGP_CBAJ_P0072013 protein_coding protein_coding MGP_CBAJ_T0010618.1 MGP_CBAJ_G0008756.1 mouse_genomes_project 5 167510495 167510573 - miRNA miRNA MGP_CBAJ_T0014980.1 MGP_CBAJ_G0013092.1 mouse_genomes_project 5 163580020 163580832 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004730.1 MGP_CBAJ_G0004072.1 mouse_genomes_project 5 133486623 133487685 - Gm15690 antisense antisense MGP_CBAJ_T0074257.1 MGP_CBAJ_G0029800.1 mouse_genomes_project 5 144607346 144662896 + MGP_CBAJ_P0074257 Vkorc1l1 protein_coding protein_coding MGP_CBAJ_T0074258.1 MGP_CBAJ_G0029800.1 mouse_genomes_project 5 144648631 144654665 + MGP_CBAJ_P0074258 Vkorc1l1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074259.1 MGP_CBAJ_G0029800.1 mouse_genomes_project 5 144649661 144654764 + MGP_CBAJ_P0074259 Vkorc1l1 protein_coding protein_coding MGP_CBAJ_T0010592.1 MGP_CBAJ_G0008730.1 mouse_genomes_project 5 138439994 138440073 - Gm27486 miRNA miRNA MGP_CBAJ_T0008134.1 MGP_CBAJ_G0006620.1 mouse_genomes_project 5 112953609 113036237 - 4930429D17Rik lincRNA lincRNA MGP_CBAJ_T0004564.1 MGP_CBAJ_G0003951.1 mouse_genomes_project 5 24358913 24366702 - Gm26648 antisense antisense MGP_CBAJ_T0004643.1 MGP_CBAJ_G0004015.1 mouse_genomes_project 5 94112347 94147603 + Gm16579 antisense antisense MGP_CBAJ_T0014738.1 MGP_CBAJ_G0012850.1 mouse_genomes_project 5 44265465 44265899 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008307.1 MGP_CBAJ_G0006730.1 mouse_genomes_project 5 152618476 152636488 + 4933404O12Rik lincRNA lincRNA MGP_CBAJ_T0008308.1 MGP_CBAJ_G0006730.1 mouse_genomes_project 5 152618511 152633136 + 4933404O12Rik lincRNA lincRNA MGP_CBAJ_T0008309.1 MGP_CBAJ_G0006730.1 mouse_genomes_project 5 152618682 152633055 + 4933404O12Rik lincRNA lincRNA MGP_CBAJ_T0008310.1 MGP_CBAJ_G0006730.1 mouse_genomes_project 5 152618731 152636494 + 4933404O12Rik lincRNA lincRNA MGP_CBAJ_T0001461.1 MGP_CBAJ_G0001382.1 mouse_genomes_project 5 33055301 33057546 + TEC TEC MGP_CBAJ_T0101946.1 MGP_CBAJ_G0039977.1 mouse_genomes_project 5 103753394 103757379 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0072552.1 MGP_CBAJ_G0029479.1 mouse_genomes_project 5 114010746 114020074 + MGP_CBAJ_P0072552 Dspp protein_coding protein_coding MGP_CBAJ_T0001859.1 MGP_CBAJ_G0001775.1 mouse_genomes_project 5 160516571 160519312 + TEC TEC MGP_CBAJ_T0007939.1 MGP_CBAJ_G0006476.1 mouse_genomes_project 5 6684392 6685660 - Gm15611 lincRNA lincRNA MGP_CBAJ_T0075358.1 MGP_CBAJ_G0030015.1 mouse_genomes_project 5 161416102 161436392 + MGP_CBAJ_P0075358 Bri3 protein_coding protein_coding MGP_CBAJ_T0075359.1 MGP_CBAJ_G0030015.1 mouse_genomes_project 5 161426727 161652688 + MGP_CBAJ_P0075359 Bri3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075360.1 MGP_CBAJ_G0030015.1 mouse_genomes_project 5 161426736 161436571 + MGP_CBAJ_P0075360 Bri3 protein_coding protein_coding MGP_CBAJ_T0074838.1 MGP_CBAJ_G0029901.1 mouse_genomes_project 5 153538032 153554984 + MGP_CBAJ_P0074838 protein_coding nonsense_mediated_decay MGP_CBAJ_T0010614.1 MGP_CBAJ_G0008752.1 mouse_genomes_project 5 157783488 157783567 + Gm26113 miRNA miRNA MGP_CBAJ_T0098064.1 MGP_CBAJ_G0036337.1 mouse_genomes_project 5 133004853 133004962 + n-R5s176 rRNA rRNA MGP_CBAJ_T0099383.1 MGP_CBAJ_G0037638.1 mouse_genomes_project 5 116911105 116911227 + Gm24191 snRNA snRNA MGP_CBAJ_T0001669.1 MGP_CBAJ_G0001587.1 mouse_genomes_project 5 88523803 88524811 + TEC TEC MGP_CBAJ_T0100611.1 MGP_CBAJ_G0038866.1 mouse_genomes_project 5 66239703 66239835 - Gm22273 snoRNA snoRNA MGP_CBAJ_T0073369.1 MGP_CBAJ_G0029641.1 mouse_genomes_project 5 128254161 128265038 - MGP_CBAJ_P0073369 Prkab1 protein_coding protein_coding MGP_CBAJ_T0073370.1 MGP_CBAJ_G0029641.1 mouse_genomes_project 5 128254165 128265084 - MGP_CBAJ_P0073370 Prkab1 protein_coding protein_coding MGP_CBAJ_T0073371.1 MGP_CBAJ_G0029641.1 mouse_genomes_project 5 128254742 128255737 - Prkab1 protein_coding retained_intron MGP_CBAJ_T0073372.1 MGP_CBAJ_G0029641.1 mouse_genomes_project 5 128254891 128258787 - Prkab1 protein_coding retained_intron MGP_CBAJ_T0073373.1 MGP_CBAJ_G0029641.1 mouse_genomes_project 5 128255010 128264932 - MGP_CBAJ_P0073373 Prkab1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073374.1 MGP_CBAJ_G0029641.1 mouse_genomes_project 5 128255225 128265027 - MGP_CBAJ_P0073374 Prkab1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073375.1 MGP_CBAJ_G0029641.1 mouse_genomes_project 5 128258390 128264973 - Prkab1 protein_coding retained_intron MGP_CBAJ_T0073376.1 MGP_CBAJ_G0029641.1 mouse_genomes_project 5 128260282 128262222 - Prkab1 protein_coding retained_intron MGP_CBAJ_T0073377.1 MGP_CBAJ_G0029641.1 mouse_genomes_project 5 128264474 128265035 - Prkab1 protein_coding retained_intron MGP_CBAJ_T0071963.1 MGP_CBAJ_G0029332.1 mouse_genomes_project 5 93312569 93368035 - MGP_CBAJ_P0071963 Cenpc1 protein_coding protein_coding MGP_CBAJ_T0071964.1 MGP_CBAJ_G0029332.1 mouse_genomes_project 5 93348444 93368003 - Cenpc1 protein_coding retained_intron MGP_CBAJ_T0071965.1 MGP_CBAJ_G0029332.1 mouse_genomes_project 5 93348445 93367999 - Cenpc1 protein_coding retained_intron MGP_CBAJ_T0071966.1 MGP_CBAJ_G0029332.1 mouse_genomes_project 5 93358513 93367974 - Cenpc1 protein_coding retained_intron MGP_CBAJ_T0100602.1 MGP_CBAJ_G0038857.1 mouse_genomes_project 5 37792096 37792220 + snoRNA snoRNA MGP_CBAJ_T0001581.1 MGP_CBAJ_G0001501.1 mouse_genomes_project 5 62759180 62761433 + TEC TEC MGP_CBAJ_T0008040.1 MGP_CBAJ_G0006547.1 mouse_genomes_project 5 68353968 68359197 + lincRNA lincRNA MGP_CBAJ_T0099328.1 MGP_CBAJ_G0037583.1 mouse_genomes_project 5 4687519 4687670 - Gm24525 snRNA snRNA MGP_CBAJ_T0070623.1 MGP_CBAJ_G0029111.1 mouse_genomes_project 5 34091544 34129645 + MGP_CBAJ_P0070623 Maea protein_coding protein_coding MGP_CBAJ_T0070624.1 MGP_CBAJ_G0029111.1 mouse_genomes_project 5 34091596 34119048 + MGP_CBAJ_P0070624 Maea protein_coding protein_coding MGP_CBAJ_T0070625.1 MGP_CBAJ_G0029111.1 mouse_genomes_project 5 34091600 34116705 + MGP_CBAJ_P0070625 Maea protein_coding nonsense_mediated_decay MGP_CBAJ_T0070626.1 MGP_CBAJ_G0029111.1 mouse_genomes_project 5 34092220 34116756 + MGP_CBAJ_P0070626 Maea protein_coding protein_coding MGP_CBAJ_T0070627.1 MGP_CBAJ_G0029111.1 mouse_genomes_project 5 34118923 34128170 + Maea protein_coding retained_intron MGP_CBAJ_T0070628.1 MGP_CBAJ_G0029111.1 mouse_genomes_project 5 34127945 34128898 + Maea protein_coding retained_intron MGP_CBAJ_T0099351.1 MGP_CBAJ_G0037606.1 mouse_genomes_project 5 64397131 64397239 - Gm23331 snRNA snRNA MGP_CBAJ_T0010551.1 MGP_CBAJ_G0008689.1 mouse_genomes_project 5 35993373 35993440 + Mir3097 miRNA miRNA MGP_CBAJ_T0004699.1 MGP_CBAJ_G0004052.1 mouse_genomes_project 5 125399413 125400133 + Gm15736 antisense antisense MGP_CBAJ_T0014797.1 MGP_CBAJ_G0012909.1 mouse_genomes_project 5 74516255 74516847 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001509.1 MGP_CBAJ_G0001430.1 mouse_genomes_project 5 47790071 47792101 + TEC TEC MGP_CBAJ_T0004808.1 MGP_CBAJ_G0004127.1 mouse_genomes_project 5 165289105 165291469 + Gm26597 antisense antisense MGP_CBAJ_T0001625.1 MGP_CBAJ_G0001544.1 mouse_genomes_project 5 72213160 72215571 + TEC TEC MGP_CBAJ_T0073118.1 MGP_CBAJ_G0029596.1 mouse_genomes_project 5 125985783 126118305 + MGP_CBAJ_P0073118 Acacb protein_coding protein_coding MGP_CBAJ_T0073119.1 MGP_CBAJ_G0029596.1 mouse_genomes_project 5 126008143 126118299 + MGP_CBAJ_P0073119 Acacb protein_coding protein_coding MGP_CBAJ_T0073120.1 MGP_CBAJ_G0029596.1 mouse_genomes_project 5 126020549 126042292 + MGP_CBAJ_P0073120 Acacb protein_coding protein_coding MGP_CBAJ_T0073121.1 MGP_CBAJ_G0029596.1 mouse_genomes_project 5 126051837 126118303 + Acacb protein_coding retained_intron MGP_CBAJ_T0073122.1 MGP_CBAJ_G0029596.1 mouse_genomes_project 5 126115879 126116505 + Acacb protein_coding retained_intron MGP_CBAJ_T0070116.1 MGP_CBAJ_G0029024.1 mouse_genomes_project 5 24968459 24968765 - MGP_CBAJ_P0070116 E130116L18Rik protein_coding protein_coding MGP_CBAJ_T0014756.1 MGP_CBAJ_G0012868.1 mouse_genomes_project 5 57617250 57626264 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014687.1 MGP_CBAJ_G0012799.1 mouse_genomes_project 5 23801683 23802322 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0070707.1 MGP_CBAJ_G0029124.1 mouse_genomes_project 5 34817523 34827491 + MGP_CBAJ_P0070707 Nat8l protein_coding protein_coding MGP_CBAJ_T0070708.1 MGP_CBAJ_G0029124.1 mouse_genomes_project 5 34821302 34822383 + Nat8l protein_coding processed_transcript MGP_CBAJ_T0004544.1 MGP_CBAJ_G0003934.1 mouse_genomes_project 5 553040 554303 + 2510017J16Rik antisense antisense MGP_CBAJ_T0001510.1 MGP_CBAJ_G0001431.1 mouse_genomes_project 5 47847673 47851092 - TEC TEC MGP_CBAJ_T0001629.1 MGP_CBAJ_G0001548.1 mouse_genomes_project 5 72668460 72671939 - TEC TEC MGP_CBAJ_T0100612.1 MGP_CBAJ_G0038867.1 mouse_genomes_project 5 66669467 66669599 - Gm24079 snoRNA snoRNA MGP_CBAJ_T0101948.1 MGP_CBAJ_G0039979.1 mouse_genomes_project 5 104711694 104714184 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010539.1 MGP_CBAJ_G0008677.1 mouse_genomes_project 5 5471145 5471254 + Gm22196 miRNA miRNA MGP_CBAJ_T0073459.1 MGP_CBAJ_G0029660.1 mouse_genomes_project 5 131258116 131438669 + Med13l protein_coding retained_intron MGP_CBAJ_T0073460.1 MGP_CBAJ_G0029660.1 mouse_genomes_project 5 131258156 131494852 + MGP_CBAJ_P0073460 Med13l protein_coding protein_coding MGP_CBAJ_T0073461.1 MGP_CBAJ_G0029660.1 mouse_genomes_project 5 131258176 131493329 + MGP_CBAJ_P0073461 Med13l protein_coding protein_coding MGP_CBAJ_T0073462.1 MGP_CBAJ_G0029660.1 mouse_genomes_project 5 131259024 131295927 + Med13l protein_coding processed_transcript MGP_CBAJ_T0073463.1 MGP_CBAJ_G0029660.1 mouse_genomes_project 5 131476773 131493329 + Med13l protein_coding retained_intron MGP_CBAJ_T0073464.1 MGP_CBAJ_G0029660.1 mouse_genomes_project 5 131479781 131493329 + Med13l protein_coding retained_intron MGP_CBAJ_T0008318.1 MGP_CBAJ_G0006738.1 mouse_genomes_project 5 154297877 154298347 - Gm43645 lincRNA lincRNA MGP_CBAJ_T0017927.1 MGP_CBAJ_G0015354.1 mouse_genomes_project 5 137242744 137250604 + Gm43813 processed_transcript TEC MGP_CBAJ_T0017928.1 MGP_CBAJ_G0015354.1 mouse_genomes_project 5 137242744 137245456 + Gm43813 processed_transcript sense_intronic MGP_CBAJ_T0008246.1 MGP_CBAJ_G0006694.1 mouse_genomes_project 5 133680703 133681413 + Gm15749 lincRNA lincRNA MGP_CBAJ_T0073885.1 MGP_CBAJ_G0029737.1 mouse_genomes_project 5 137381555 137393946 - MGP_CBAJ_P0073885 Diablo protein_coding nonsense_mediated_decay MGP_CBAJ_T0073886.1 MGP_CBAJ_G0029737.1 mouse_genomes_project 5 137381932 137395233 - MGP_CBAJ_P0073886 Diablo protein_coding nonsense_mediated_decay MGP_CBAJ_T0073887.1 MGP_CBAJ_G0029737.1 mouse_genomes_project 5 137382362 137393924 - MGP_CBAJ_P0073887 Diablo protein_coding protein_coding MGP_CBAJ_T0073888.1 MGP_CBAJ_G0029737.1 mouse_genomes_project 5 137385661 137393940 - MGP_CBAJ_P0073888 Diablo protein_coding protein_coding MGP_CBAJ_T0073889.1 MGP_CBAJ_G0029737.1 mouse_genomes_project 5 137386116 137393937 - MGP_CBAJ_P0073889 Diablo protein_coding protein_coding MGP_CBAJ_T0073890.1 MGP_CBAJ_G0029737.1 mouse_genomes_project 5 137387438 137393937 - MGP_CBAJ_P0073890 Diablo protein_coding protein_coding MGP_CBAJ_T0073891.1 MGP_CBAJ_G0029737.1 mouse_genomes_project 5 137387789 137393295 - Diablo protein_coding retained_intron MGP_CBAJ_T0073892.1 MGP_CBAJ_G0029737.1 mouse_genomes_project 5 137387890 137390606 - Diablo protein_coding retained_intron MGP_CBAJ_T0073893.1 MGP_CBAJ_G0029737.1 mouse_genomes_project 5 137394299 137395292 - Diablo protein_coding processed_transcript MGP_CBAJ_T0001469.1 MGP_CBAJ_G0001390.1 mouse_genomes_project 5 35383779 35386228 + TEC TEC MGP_CBAJ_T0071667.1 MGP_CBAJ_G0029284.1 mouse_genomes_project 5 78001065 78024329 + MGP_CBAJ_P0071667 Nipal1 protein_coding protein_coding MGP_CBAJ_T0071668.1 MGP_CBAJ_G0029284.1 mouse_genomes_project 5 78001083 78020889 + MGP_CBAJ_P0071668 Nipal1 protein_coding protein_coding MGP_CBAJ_T0071669.1 MGP_CBAJ_G0029284.1 mouse_genomes_project 5 78001112 78012409 + Nipal1 protein_coding retained_intron MGP_CBAJ_T0011480.1 MGP_CBAJ_G0009618.1 mouse_genomes_project 5 123749266 123749340 - Gm27882 misc_RNA misc_RNA MGP_CBAJ_T0008077.1 MGP_CBAJ_G0006575.1 mouse_genomes_project 5 82956940 82969373 - 1700112J05Rik lincRNA lincRNA MGP_CBAJ_T0071580.1 MGP_CBAJ_G0029266.1 mouse_genomes_project 5 72432641 72682481 - MGP_CBAJ_P0071580 Atp8a1 protein_coding protein_coding MGP_CBAJ_T0071581.1 MGP_CBAJ_G0029266.1 mouse_genomes_project 5 72432641 72682545 - MGP_CBAJ_P0071581 Atp8a1 protein_coding protein_coding MGP_CBAJ_T0071582.1 MGP_CBAJ_G0029266.1 mouse_genomes_project 5 72433662 72682542 - MGP_CBAJ_P0071582 Atp8a1 protein_coding protein_coding MGP_CBAJ_T0071583.1 MGP_CBAJ_G0029266.1 mouse_genomes_project 5 72435077 72682406 - MGP_CBAJ_P0071583 Atp8a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071584.1 MGP_CBAJ_G0029266.1 mouse_genomes_project 5 72437179 72478733 - Atp8a1 protein_coding processed_transcript MGP_CBAJ_T0071585.1 MGP_CBAJ_G0029266.1 mouse_genomes_project 5 72500892 72602344 - Atp8a1 protein_coding retained_intron MGP_CBAJ_T0071586.1 MGP_CBAJ_G0029266.1 mouse_genomes_project 5 72592219 72594702 - Atp8a1 protein_coding retained_intron MGP_CBAJ_T0071587.1 MGP_CBAJ_G0029266.1 mouse_genomes_project 5 72601752 72650382 - Atp8a1 protein_coding processed_transcript MGP_CBAJ_T0071588.1 MGP_CBAJ_G0029266.1 mouse_genomes_project 5 72606463 72682542 - MGP_CBAJ_P0071588 Atp8a1 protein_coding protein_coding MGP_CBAJ_T0071589.1 MGP_CBAJ_G0029266.1 mouse_genomes_project 5 72606463 72682542 - MGP_CBAJ_P0071589 Atp8a1 protein_coding protein_coding MGP_CBAJ_T0071590.1 MGP_CBAJ_G0029266.1 mouse_genomes_project 5 72614774 72682540 - Atp8a1 protein_coding retained_intron MGP_CBAJ_T0071591.1 MGP_CBAJ_G0029266.1 mouse_genomes_project 5 72640559 72643919 - Atp8a1 protein_coding retained_intron MGP_CBAJ_T0071592.1 MGP_CBAJ_G0029266.1 mouse_genomes_project 5 72647319 72650391 - Atp8a1 protein_coding retained_intron MGP_CBAJ_T0071593.1 MGP_CBAJ_G0029266.1 mouse_genomes_project 5 72647323 72651005 - MGP_CBAJ_P0071593 Atp8a1 protein_coding protein_coding MGP_CBAJ_T0072107.1 MGP_CBAJ_G0029382.1 mouse_genomes_project 5 96675282 97066195 + MGP_CBAJ_P0072107 Slc4a4 protein_coding protein_coding MGP_CBAJ_T0072108.1 MGP_CBAJ_G0029382.1 mouse_genomes_project 5 96675725 96676735 + Slc4a4 protein_coding processed_transcript MGP_CBAJ_T0072109.1 MGP_CBAJ_G0029382.1 mouse_genomes_project 5 96675761 97061400 + MGP_CBAJ_P0072109 Slc4a4 protein_coding protein_coding MGP_CBAJ_T0072110.1 MGP_CBAJ_G0029382.1 mouse_genomes_project 5 96675763 97062327 + MGP_CBAJ_P0072110 Slc4a4 protein_coding protein_coding MGP_CBAJ_T0072111.1 MGP_CBAJ_G0029382.1 mouse_genomes_project 5 96733788 96753949 + MGP_CBAJ_P0072111 Slc4a4 protein_coding protein_coding MGP_CBAJ_T0072112.1 MGP_CBAJ_G0029382.1 mouse_genomes_project 5 96834209 97061394 + MGP_CBAJ_P0072112 Slc4a4 protein_coding protein_coding MGP_CBAJ_T0072113.1 MGP_CBAJ_G0029382.1 mouse_genomes_project 5 96834320 96851004 + MGP_CBAJ_P0072113 Slc4a4 protein_coding protein_coding MGP_CBAJ_T0072114.1 MGP_CBAJ_G0029382.1 mouse_genomes_project 5 96834335 96942135 + MGP_CBAJ_P0072114 Slc4a4 protein_coding protein_coding MGP_CBAJ_T0074240.1 MGP_CBAJ_G0029796.1 mouse_genomes_project 5 144463832 144484445 + MGP_CBAJ_P0074240 Sumf2 protein_coding protein_coding MGP_CBAJ_T0074241.1 MGP_CBAJ_G0029796.1 mouse_genomes_project 5 144463857 144471540 + MGP_CBAJ_P0074241 Sumf2 protein_coding protein_coding MGP_CBAJ_T0074242.1 MGP_CBAJ_G0029796.1 mouse_genomes_project 5 144463866 144471630 + Sumf2 protein_coding processed_transcript MGP_CBAJ_T0074243.1 MGP_CBAJ_G0029796.1 mouse_genomes_project 5 144463866 144483747 + MGP_CBAJ_P0074243 Sumf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074244.1 MGP_CBAJ_G0029796.1 mouse_genomes_project 5 144469302 144483113 + Sumf2 protein_coding processed_transcript MGP_CBAJ_T0074245.1 MGP_CBAJ_G0029796.1 mouse_genomes_project 5 144469302 144483113 + Sumf2 protein_coding processed_transcript MGP_CBAJ_T0008157.1 MGP_CBAJ_G0006637.1 mouse_genomes_project 5 118080598 118086019 - 4930428O21Rik lincRNA lincRNA MGP_CBAJ_T0072571.1 MGP_CBAJ_G0029489.1 mouse_genomes_project 5 115051867 115091443 - protein_coding retained_intron MGP_CBAJ_T0072572.1 MGP_CBAJ_G0029489.1 mouse_genomes_project 5 115051867 115058935 - protein_coding processed_transcript MGP_CBAJ_T0072573.1 MGP_CBAJ_G0029489.1 mouse_genomes_project 5 115051870 115177731 - MGP_CBAJ_P0072573 protein_coding protein_coding MGP_CBAJ_T0072577.1 MGP_CBAJ_G0029489.1 mouse_genomes_project 5 115125356 115143168 - MGP_CBAJ_P0072577 protein_coding protein_coding MGP_CBAJ_T0100599.1 MGP_CBAJ_G0038854.1 mouse_genomes_project 5 19128731 19128859 - Gm25761 snoRNA snoRNA MGP_CBAJ_T0001751.1 MGP_CBAJ_G0001669.1 mouse_genomes_project 5 131305118 131307536 + TEC TEC MGP_CBAJ_T0001807.1 MGP_CBAJ_G0001724.1 mouse_genomes_project 5 145403836 145404264 - TEC TEC MGP_CBAJ_T0008120.1 MGP_CBAJ_G0006611.1 mouse_genomes_project 5 109263977 109277283 + lincRNA lincRNA MGP_CBAJ_T0075422.1 MGP_CBAJ_G0030027.1 mouse_genomes_project 5 162529585 162544475 + MGP_CBAJ_P0075422 Cpsf4 protein_coding protein_coding MGP_CBAJ_T0075423.1 MGP_CBAJ_G0030027.1 mouse_genomes_project 5 162529596 162544475 + MGP_CBAJ_P0075423 Cpsf4 protein_coding protein_coding MGP_CBAJ_T0075424.1 MGP_CBAJ_G0030027.1 mouse_genomes_project 5 162529619 162544474 + MGP_CBAJ_P0075424 Cpsf4 protein_coding protein_coding MGP_CBAJ_T0075425.1 MGP_CBAJ_G0030027.1 mouse_genomes_project 5 162529626 162544187 + MGP_CBAJ_P0075425 Cpsf4 protein_coding protein_coding MGP_CBAJ_T0075426.1 MGP_CBAJ_G0030027.1 mouse_genomes_project 5 162529643 162543666 + MGP_CBAJ_P0075426 Cpsf4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075427.1 MGP_CBAJ_G0030027.1 mouse_genomes_project 5 162529830 162543787 + MGP_CBAJ_P0075427 Cpsf4 protein_coding protein_coding MGP_CBAJ_T0075428.1 MGP_CBAJ_G0030027.1 mouse_genomes_project 5 162532944 162544475 + Cpsf4 protein_coding retained_intron MGP_CBAJ_T0072101.1 MGP_CBAJ_G0029380.1 mouse_genomes_project 5 96494493 96525112 + Mob1b protein_coding retained_intron MGP_CBAJ_T0072102.1 MGP_CBAJ_G0029380.1 mouse_genomes_project 5 96494493 96542810 + MGP_CBAJ_P0072102 Mob1b protein_coding protein_coding MGP_CBAJ_T0072103.1 MGP_CBAJ_G0029380.1 mouse_genomes_project 5 96494509 96533578 + MGP_CBAJ_P0072103 Mob1b protein_coding protein_coding MGP_CBAJ_T0072104.1 MGP_CBAJ_G0029380.1 mouse_genomes_project 5 96494615 96525827 + Mob1b protein_coding retained_intron MGP_CBAJ_T0075566.1 MGP_CBAJ_G0030068.1 mouse_genomes_project 5 165954199 166384660 + MGP_CBAJ_P0075566 Mtus2 protein_coding protein_coding MGP_CBAJ_T0075567.1 MGP_CBAJ_G0030068.1 mouse_genomes_project 5 165954221 166095252 + MGP_CBAJ_P0075567 Mtus2 protein_coding protein_coding MGP_CBAJ_T0075568.1 MGP_CBAJ_G0030068.1 mouse_genomes_project 5 166101566 166283668 + Mtus2 protein_coding retained_intron MGP_CBAJ_T0075569.1 MGP_CBAJ_G0030068.1 mouse_genomes_project 5 166116779 166255679 + Mtus2 protein_coding processed_transcript MGP_CBAJ_T0075570.1 MGP_CBAJ_G0030068.1 mouse_genomes_project 5 166242310 166384657 + MGP_CBAJ_P0075570 Mtus2 protein_coding protein_coding MGP_CBAJ_T0075571.1 MGP_CBAJ_G0030068.1 mouse_genomes_project 5 166289399 166292580 + Mtus2 protein_coding retained_intron MGP_CBAJ_T0075572.1 MGP_CBAJ_G0030068.1 mouse_genomes_project 5 166318063 166382666 + MGP_CBAJ_P0075572 Mtus2 protein_coding protein_coding MGP_CBAJ_T0075573.1 MGP_CBAJ_G0030068.1 mouse_genomes_project 5 166318138 166382147 + MGP_CBAJ_P0075573 Mtus2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075574.1 MGP_CBAJ_G0030068.1 mouse_genomes_project 5 166318191 166382633 + MGP_CBAJ_P0075574 Mtus2 protein_coding protein_coding MGP_CBAJ_T0075575.1 MGP_CBAJ_G0030068.1 mouse_genomes_project 5 166359330 166382055 + MGP_CBAJ_P0075575 Mtus2 protein_coding protein_coding MGP_CBAJ_T0075576.1 MGP_CBAJ_G0030068.1 mouse_genomes_project 5 166359339 166382595 + MGP_CBAJ_P0075576 Mtus2 protein_coding protein_coding MGP_CBAJ_T0099395.1 MGP_CBAJ_G0037650.1 mouse_genomes_project 5 137190303 137190472 + Gm23458 snRNA snRNA MGP_CBAJ_T0073952.1 MGP_CBAJ_G0029745.1 mouse_genomes_project 5 137827552 137850672 + MGP_CBAJ_P0073952 Denr protein_coding protein_coding MGP_CBAJ_T0073953.1 MGP_CBAJ_G0029745.1 mouse_genomes_project 5 137827646 137828886 + Denr protein_coding processed_transcript MGP_CBAJ_T0073954.1 MGP_CBAJ_G0029745.1 mouse_genomes_project 5 137827652 137831614 + Denr protein_coding retained_intron MGP_CBAJ_T0073955.1 MGP_CBAJ_G0029745.1 mouse_genomes_project 5 137827659 137828866 + Denr protein_coding retained_intron MGP_CBAJ_T0073956.1 MGP_CBAJ_G0029745.1 mouse_genomes_project 5 137827866 137848970 + MGP_CBAJ_P0073956 Denr protein_coding protein_coding MGP_CBAJ_T0001753.1 MGP_CBAJ_G0001671.1 mouse_genomes_project 5 131351269 131356219 + TEC TEC MGP_CBAJ_T0001673.1 MGP_CBAJ_G0001591.1 mouse_genomes_project 5 98385688 98388331 + TEC TEC MGP_CBAJ_T0008349.1 MGP_CBAJ_G0006765.1 mouse_genomes_project 5 167137771 167140185 + Gm15409 lincRNA lincRNA MGP_CBAJ_T0098207.1 MGP_CBAJ_G0036480.1 mouse_genomes_project 5 2169882 2170009 - Gm22897 scaRNA scaRNA MGP_CBAJ_T0072243.1 MGP_CBAJ_G0029417.1 mouse_genomes_project 5 100587930 100594608 - MGP_CBAJ_P0072243 Cxcl9 protein_coding protein_coding MGP_CBAJ_T0072244.1 MGP_CBAJ_G0029417.1 mouse_genomes_project 5 100593148 100594607 - Cxcl9 protein_coding retained_intron MGP_CBAJ_T0001652.1 MGP_CBAJ_G0001570.1 mouse_genomes_project 5 79207488 79208064 - TEC TEC MGP_CBAJ_T0070276.1 MGP_CBAJ_G0029060.1 mouse_genomes_project 5 30958358 30967062 + MGP_CBAJ_P0070276 Cenpa protein_coding protein_coding MGP_CBAJ_T0070277.1 MGP_CBAJ_G0029060.1 mouse_genomes_project 5 30958478 30966610 + MGP_CBAJ_P0070277 Cenpa protein_coding nonsense_mediated_decay MGP_CBAJ_T0070278.1 MGP_CBAJ_G0029060.1 mouse_genomes_project 5 30958493 30966547 + MGP_CBAJ_P0070278 Cenpa protein_coding nonsense_mediated_decay MGP_CBAJ_T0070279.1 MGP_CBAJ_G0029060.1 mouse_genomes_project 5 30958516 30966641 + Cenpa protein_coding retained_intron MGP_CBAJ_T0070280.1 MGP_CBAJ_G0029060.1 mouse_genomes_project 5 30958524 30961991 + MGP_CBAJ_P0070280 Cenpa protein_coding protein_coding MGP_CBAJ_T0070281.1 MGP_CBAJ_G0029060.1 mouse_genomes_project 5 30958538 30966296 + MGP_CBAJ_P0070281 Cenpa protein_coding protein_coding MGP_CBAJ_T0070282.1 MGP_CBAJ_G0029060.1 mouse_genomes_project 5 30958541 30962997 + Cenpa protein_coding retained_intron MGP_CBAJ_T0070283.1 MGP_CBAJ_G0029060.1 mouse_genomes_project 5 30958555 30966641 + MGP_CBAJ_P0070283 Cenpa protein_coding nonsense_mediated_decay MGP_CBAJ_T0070284.1 MGP_CBAJ_G0029060.1 mouse_genomes_project 5 30958579 30966618 + MGP_CBAJ_P0070284 Cenpa protein_coding nonsense_mediated_decay MGP_CBAJ_T0070285.1 MGP_CBAJ_G0029060.1 mouse_genomes_project 5 30964186 30966434 + Cenpa protein_coding retained_intron MGP_CBAJ_T0004589.1 MGP_CBAJ_G0003973.1 mouse_genomes_project 5 38211726 38215216 - Gm26647 antisense antisense MGP_CBAJ_T0008336.1 MGP_CBAJ_G0006753.1 mouse_genomes_project 5 164468092 164468957 + 4930573C15Rik lincRNA lincRNA MGP_CBAJ_T0001819.1 MGP_CBAJ_G0001736.1 mouse_genomes_project 5 146884712 146885460 - TEC TEC MGP_CBAJ_T0071743.1 MGP_CBAJ_G0029298.1 mouse_genomes_project 5 79211884 79240090 + MGP_CBAJ_P0071743 Spata18 protein_coding protein_coding MGP_CBAJ_T0071744.1 MGP_CBAJ_G0029298.1 mouse_genomes_project 5 79211887 79236005 + MGP_CBAJ_P0071744 Spata18 protein_coding non_stop_decay MGP_CBAJ_T0071745.1 MGP_CBAJ_G0029298.1 mouse_genomes_project 5 79218111 79240060 + MGP_CBAJ_P0071745 Spata18 protein_coding protein_coding MGP_CBAJ_T0071746.1 MGP_CBAJ_G0029298.1 mouse_genomes_project 5 79219859 79240062 + MGP_CBAJ_P0071746 Spata18 protein_coding protein_coding MGP_CBAJ_T0074742.1 MGP_CBAJ_G0029885.1 mouse_genomes_project 5 153129039 153130076 + MGP_CBAJ_P0074742 Ufsp1 protein_coding protein_coding MGP_CBAJ_T0014636.1 MGP_CBAJ_G0012748.1 mouse_genomes_project 5 5438809 5439549 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004615.1 MGP_CBAJ_G0003991.1 mouse_genomes_project 5 56475644 56476613 - Gm42747 antisense antisense MGP_CBAJ_T0074167.1 MGP_CBAJ_G0029782.1 mouse_genomes_project 5 142184838 142893172 - MGP_CBAJ_P0074167 Tmem132d protein_coding protein_coding MGP_CBAJ_T0074168.1 MGP_CBAJ_G0029782.1 mouse_genomes_project 5 142713531 142720606 - Tmem132d protein_coding processed_transcript MGP_CBAJ_T0074169.1 MGP_CBAJ_G0029782.1 mouse_genomes_project 5 142713636 142720544 - Tmem132d protein_coding processed_transcript MGP_CBAJ_T0001702.1 MGP_CBAJ_G0001620.1 mouse_genomes_project 5 113870326 113873101 - TEC TEC MGP_CBAJ_T0007986.1 MGP_CBAJ_G0006507.1 mouse_genomes_project 5 35182414 35200866 - Gm43458 lincRNA lincRNA MGP_CBAJ_T0001801.1 MGP_CBAJ_G0001718.1 mouse_genomes_project 5 144115250 144116188 - TEC TEC MGP_CBAJ_T0014697.1 MGP_CBAJ_G0012809.1 mouse_genomes_project 5 26719037 26719443 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004794.1 MGP_CBAJ_G0004119.1 mouse_genomes_project 5 156837003 156842613 + antisense antisense MGP_CBAJ_T0004795.1 MGP_CBAJ_G0004119.1 mouse_genomes_project 5 156841403 156842613 + antisense antisense MGP_CBAJ_T0072056.1 MGP_CBAJ_G0029360.1 mouse_genomes_project 5 95326164 95350203 + MGP_CBAJ_P0072056 Csn1s2b protein_coding protein_coding MGP_CBAJ_T0072057.1 MGP_CBAJ_G0029360.1 mouse_genomes_project 5 95326205 95350194 + MGP_CBAJ_P0072057 Csn1s2b protein_coding protein_coding MGP_CBAJ_T0072058.1 MGP_CBAJ_G0029360.1 mouse_genomes_project 5 95326206 95338382 + MGP_CBAJ_P0072058 Csn1s2b protein_coding protein_coding MGP_CBAJ_T0072059.1 MGP_CBAJ_G0029360.1 mouse_genomes_project 5 95326209 95350098 + MGP_CBAJ_P0072059 Csn1s2b protein_coding protein_coding MGP_CBAJ_T0072060.1 MGP_CBAJ_G0029360.1 mouse_genomes_project 5 95329438 95331501 + Csn1s2b protein_coding retained_intron MGP_CBAJ_T0014691.1 MGP_CBAJ_G0012803.1 mouse_genomes_project 5 25187995 25188245 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008228.1 MGP_CBAJ_G0006679.1 mouse_genomes_project 5 131033340 131033863 - Gm28563 lincRNA lincRNA MGP_CBAJ_T0001762.1 MGP_CBAJ_G0001680.1 mouse_genomes_project 5 134465091 134468352 - TEC TEC MGP_CBAJ_T0074514.1 MGP_CBAJ_G0029841.1 mouse_genomes_project 5 150591564 150659166 + MGP_CBAJ_P0074514 Baz1b protein_coding protein_coding MGP_CBAJ_T0074515.1 MGP_CBAJ_G0029841.1 mouse_genomes_project 5 150604816 150607834 + Baz1b protein_coding retained_intron MGP_CBAJ_T0074516.1 MGP_CBAJ_G0029841.1 mouse_genomes_project 5 150615225 150623641 + Baz1b protein_coding retained_intron MGP_CBAJ_T0074517.1 MGP_CBAJ_G0029841.1 mouse_genomes_project 5 150620188 150629679 + Baz1b protein_coding retained_intron MGP_CBAJ_T0074518.1 MGP_CBAJ_G0029841.1 mouse_genomes_project 5 150655411 150657219 + Baz1b protein_coding retained_intron MGP_CBAJ_T0069826.1 MGP_CBAJ_G0028964.1 mouse_genomes_project 5 16154043 16162049 + MGP_CBAJ_P0069826 protein_coding protein_coding MGP_CBAJ_T0008201.1 MGP_CBAJ_G0006660.1 mouse_genomes_project 5 124238172 124240991 + Gm42864 lincRNA lincRNA MGP_CBAJ_T0004687.1 MGP_CBAJ_G0004043.1 mouse_genomes_project 5 121441435 121442067 - Gm43136 antisense antisense MGP_CBAJ_T0001493.1 MGP_CBAJ_G0001414.1 mouse_genomes_project 5 45992911 45994602 + TEC TEC MGP_CBAJ_T0014642.1 MGP_CBAJ_G0012754.1 mouse_genomes_project 5 7746156 7746901 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0073388.1 MGP_CBAJ_G0029646.1 mouse_genomes_project 5 129540432 129564755 - MGP_CBAJ_P0073388 Suds3 protein_coding protein_coding MGP_CBAJ_T0073389.1 MGP_CBAJ_G0029646.1 mouse_genomes_project 5 129540437 129553158 - Suds3 protein_coding retained_intron MGP_CBAJ_T0073390.1 MGP_CBAJ_G0029646.1 mouse_genomes_project 5 129541189 129564870 - MGP_CBAJ_P0073390 Suds3 protein_coding protein_coding MGP_CBAJ_T0073391.1 MGP_CBAJ_G0029646.1 mouse_genomes_project 5 129543711 129547564 - Suds3 protein_coding retained_intron MGP_CBAJ_T0073392.1 MGP_CBAJ_G0029646.1 mouse_genomes_project 5 129554044 129562308 - Suds3 protein_coding retained_intron MGP_CBAJ_T0073393.1 MGP_CBAJ_G0029646.1 mouse_genomes_project 5 129554050 129558619 - Suds3 protein_coding retained_intron MGP_CBAJ_T0074880.1 MGP_CBAJ_G0029909.1 mouse_genomes_project 5 153733194 153771449 + MGP_CBAJ_P0074880 protein_coding unknown_likely_coding MGP_CBAJ_T0074881.1 MGP_CBAJ_G0029909.1 mouse_genomes_project 5 153738571 153741743 + protein_coding retained_intron MGP_CBAJ_T0074882.1 MGP_CBAJ_G0029909.1 mouse_genomes_project 5 153748099 153749966 + protein_coding retained_intron MGP_CBAJ_T0074883.1 MGP_CBAJ_G0029909.1 mouse_genomes_project 5 153748328 153760508 + protein_coding processed_transcript MGP_CBAJ_T0074884.1 MGP_CBAJ_G0029909.1 mouse_genomes_project 5 153759724 153771151 + MGP_CBAJ_P0074884 protein_coding protein_coding MGP_CBAJ_T0074196.1 MGP_CBAJ_G0029789.1 mouse_genomes_project 5 144116407 144193605 + MGP_CBAJ_P0074196 Sfswap protein_coding protein_coding MGP_CBAJ_T0074197.1 MGP_CBAJ_G0029789.1 mouse_genomes_project 5 144116426 144191869 + MGP_CBAJ_P0074197 Sfswap protein_coding nonsense_mediated_decay MGP_CBAJ_T0074198.1 MGP_CBAJ_G0029789.1 mouse_genomes_project 5 144116432 144119830 + Sfswap protein_coding retained_intron MGP_CBAJ_T0074199.1 MGP_CBAJ_G0029789.1 mouse_genomes_project 5 144116437 144193602 + Sfswap protein_coding processed_transcript MGP_CBAJ_T0074200.1 MGP_CBAJ_G0029789.1 mouse_genomes_project 5 144116635 144119568 + MGP_CBAJ_P0074200 Sfswap protein_coding nonsense_mediated_decay MGP_CBAJ_T0074201.1 MGP_CBAJ_G0029789.1 mouse_genomes_project 5 144117580 144118235 + Sfswap protein_coding TEC MGP_CBAJ_T0074202.1 MGP_CBAJ_G0029789.1 mouse_genomes_project 5 144118345 144119321 + Sfswap protein_coding processed_transcript MGP_CBAJ_T0074203.1 MGP_CBAJ_G0029789.1 mouse_genomes_project 5 144119160 144120075 + Sfswap protein_coding retained_intron MGP_CBAJ_T0074204.1 MGP_CBAJ_G0029789.1 mouse_genomes_project 5 144119282 144175781 + MGP_CBAJ_P0074204 Sfswap protein_coding unknown_likely_coding MGP_CBAJ_T0074205.1 MGP_CBAJ_G0029789.1 mouse_genomes_project 5 144119527 144131440 + Sfswap protein_coding retained_intron MGP_CBAJ_T0074206.1 MGP_CBAJ_G0029789.1 mouse_genomes_project 5 144162459 144171883 + MGP_CBAJ_P0074206 Sfswap protein_coding nonsense_mediated_decay MGP_CBAJ_T0074207.1 MGP_CBAJ_G0029789.1 mouse_genomes_project 5 144169961 144193602 + Sfswap protein_coding retained_intron MGP_CBAJ_T0074208.1 MGP_CBAJ_G0029789.1 mouse_genomes_project 5 144171798 144180520 + Sfswap protein_coding processed_transcript MGP_CBAJ_T0074209.1 MGP_CBAJ_G0029789.1 mouse_genomes_project 5 144181179 144193605 + Sfswap protein_coding retained_intron MGP_CBAJ_T0074210.1 MGP_CBAJ_G0029789.1 mouse_genomes_project 5 144181520 144192235 + Sfswap protein_coding retained_intron MGP_CBAJ_T0074211.1 MGP_CBAJ_G0029789.1 mouse_genomes_project 5 144192937 144193605 + Sfswap protein_coding retained_intron MGP_CBAJ_T0069684.1 MGP_CBAJ_G0028942.1 mouse_genomes_project 5 5617628 5645820 + MGP_CBAJ_P0069684 Sri protein_coding protein_coding MGP_CBAJ_T0069685.1 MGP_CBAJ_G0028942.1 mouse_genomes_project 5 5628076 5645592 + MGP_CBAJ_P0069685 Sri protein_coding protein_coding MGP_CBAJ_T0069686.1 MGP_CBAJ_G0028942.1 mouse_genomes_project 5 5628107 5629405 + Sri protein_coding retained_intron MGP_CBAJ_T0069687.1 MGP_CBAJ_G0028942.1 mouse_genomes_project 5 5628111 5631271 + Sri protein_coding retained_intron MGP_CBAJ_T0069688.1 MGP_CBAJ_G0028942.1 mouse_genomes_project 5 5628157 5636158 + Sri protein_coding retained_intron MGP_CBAJ_T0069689.1 MGP_CBAJ_G0028942.1 mouse_genomes_project 5 5630891 5644193 + Sri protein_coding retained_intron MGP_CBAJ_T0069690.1 MGP_CBAJ_G0028942.1 mouse_genomes_project 5 5632822 5634028 + Sri protein_coding retained_intron MGP_CBAJ_T0014692.1 MGP_CBAJ_G0012804.1 mouse_genomes_project 5 25208836 25209438 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014641.1 MGP_CBAJ_G0012753.1 mouse_genomes_project 5 7547627 7548591 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014653.1 MGP_CBAJ_G0012765.1 mouse_genomes_project 5 14357284 14357528 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0072363.1 MGP_CBAJ_G0029441.1 mouse_genomes_project 5 107285246 107295387 + MGP_CBAJ_P0072363 Prdm8 protein_coding protein_coding MGP_CBAJ_T0071513.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 70976333 70991355 - Apbb2 protein_coding retained_intron MGP_CBAJ_T0071514.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 70976355 71322728 - MGP_CBAJ_P0071514 Apbb2 protein_coding protein_coding MGP_CBAJ_T0071515.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 70976358 71322754 - MGP_CBAJ_P0071515 Apbb2 protein_coding protein_coding MGP_CBAJ_T0071516.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 70976358 71322651 - MGP_CBAJ_P0071516 Apbb2 protein_coding protein_coding MGP_CBAJ_T0071517.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 70976470 71322633 - MGP_CBAJ_P0071517 Apbb2 protein_coding protein_coding MGP_CBAJ_T0071518.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 70978289 71183817 - Apbb2 protein_coding retained_intron MGP_CBAJ_T0071519.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 70979500 71014861 - Apbb2 protein_coding processed_transcript MGP_CBAJ_T0071520.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 70979516 71322641 - MGP_CBAJ_P0071520 Apbb2 protein_coding protein_coding MGP_CBAJ_T0071521.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 70979516 71322641 - MGP_CBAJ_P0071521 Apbb2 protein_coding protein_coding MGP_CBAJ_T0071522.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 70979833 71183816 - MGP_CBAJ_P0071522 Apbb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071523.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 70985205 71014659 - Apbb2 protein_coding processed_transcript MGP_CBAJ_T0071524.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 71081290 71322653 - Apbb2 protein_coding retained_intron MGP_CBAJ_T0071525.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 71081290 71322640 - Apbb2 protein_coding retained_intron MGP_CBAJ_T0071526.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 71141606 71322610 - MGP_CBAJ_P0071526 Apbb2 protein_coding protein_coding MGP_CBAJ_T0071527.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 71141619 71202241 - MGP_CBAJ_P0071527 Apbb2 protein_coding protein_coding MGP_CBAJ_T0071528.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 71141648 71322641 - MGP_CBAJ_P0071528 Apbb2 protein_coding protein_coding MGP_CBAJ_T0071529.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 71141852 71322744 - MGP_CBAJ_P0071529 Apbb2 protein_coding protein_coding MGP_CBAJ_T0071530.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 71141885 71202248 - MGP_CBAJ_P0071530 Apbb2 protein_coding protein_coding MGP_CBAJ_T0071531.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 71141891 71242248 - MGP_CBAJ_P0071531 Apbb2 protein_coding protein_coding MGP_CBAJ_T0071532.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 71151538 71322642 - Apbb2 protein_coding retained_intron MGP_CBAJ_T0071533.1 MGP_CBAJ_G0029258.1 mouse_genomes_project 5 71236021 71322658 - Apbb2 protein_coding retained_intron MGP_CBAJ_T0014815.1 MGP_CBAJ_G0012927.1 mouse_genomes_project 5 82307668 82308742 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101932.1 MGP_CBAJ_G0039963.1 mouse_genomes_project 5 62008105 62009513 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0100624.1 MGP_CBAJ_G0038879.1 mouse_genomes_project 5 97728835 97728964 + Gm25758 snoRNA snoRNA MGP_CBAJ_T0017863.1 MGP_CBAJ_G0015331.1 mouse_genomes_project 5 2362497 2365152 - Gm43623 processed_transcript processed_transcript MGP_CBAJ_T0007975.1 MGP_CBAJ_G0006499.1 mouse_genomes_project 5 30218652 30229958 - Gm42806 lincRNA lincRNA MGP_CBAJ_T0007976.1 MGP_CBAJ_G0006499.1 mouse_genomes_project 5 30225978 30228931 - Gm42806 lincRNA lincRNA MGP_CBAJ_T0074785.1 MGP_CBAJ_G0029894.1 mouse_genomes_project 5 153419351 153421977 - MGP_CBAJ_P0074785 Gnb2 protein_coding protein_coding MGP_CBAJ_T0074786.1 MGP_CBAJ_G0029894.1 mouse_genomes_project 5 153419353 153420146 - Gnb2 protein_coding retained_intron MGP_CBAJ_T0074787.1 MGP_CBAJ_G0029894.1 mouse_genomes_project 5 153419382 153425290 - MGP_CBAJ_P0074787 Gnb2 protein_coding protein_coding MGP_CBAJ_T0074788.1 MGP_CBAJ_G0029894.1 mouse_genomes_project 5 153419728 153426715 - MGP_CBAJ_P0074788 Gnb2 protein_coding protein_coding MGP_CBAJ_T0074789.1 MGP_CBAJ_G0029894.1 mouse_genomes_project 5 153419790 153422125 - Gnb2 protein_coding retained_intron MGP_CBAJ_T0074790.1 MGP_CBAJ_G0029894.1 mouse_genomes_project 5 153419997 153421088 - Gnb2 protein_coding retained_intron MGP_CBAJ_T0074791.1 MGP_CBAJ_G0029894.1 mouse_genomes_project 5 153420021 153421046 - Gnb2 protein_coding retained_intron MGP_CBAJ_T0074792.1 MGP_CBAJ_G0029894.1 mouse_genomes_project 5 153420098 153421002 - Gnb2 protein_coding retained_intron MGP_CBAJ_T0074793.1 MGP_CBAJ_G0029894.1 mouse_genomes_project 5 153420245 153422264 - MGP_CBAJ_P0074793 Gnb2 protein_coding protein_coding MGP_CBAJ_T0074794.1 MGP_CBAJ_G0029894.1 mouse_genomes_project 5 153420363 153425484 - MGP_CBAJ_P0074794 Gnb2 protein_coding protein_coding MGP_CBAJ_T0001492.1 MGP_CBAJ_G0001413.1 mouse_genomes_project 5 45816476 45817018 - TEC TEC MGP_CBAJ_T0014827.1 MGP_CBAJ_G0012939.1 mouse_genomes_project 5 92007440 92008107 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0075458.1 MGP_CBAJ_G0030039.1 mouse_genomes_project 5 163499570 163565711 - MGP_CBAJ_P0075458 Cyp3a25 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075460.1 MGP_CBAJ_G0030039.1 mouse_genomes_project 5 163499572 163565710 - MGP_CBAJ_P0075460 Cyp3a25 protein_coding protein_coding MGP_CBAJ_T0075461.1 MGP_CBAJ_G0030039.1 mouse_genomes_project 5 163499942 163565691 - MGP_CBAJ_P0075461 Cyp3a25 protein_coding protein_coding MGP_CBAJ_T0075462.1 MGP_CBAJ_G0030039.1 mouse_genomes_project 5 163507313 163517281 - Cyp3a25 protein_coding processed_transcript MGP_CBAJ_T0070399.1 MGP_CBAJ_G0029079.1 mouse_genomes_project 5 31504577 31517762 - Gm29609 protein_coding processed_transcript MGP_CBAJ_T0070402.1 MGP_CBAJ_G0029079.1 mouse_genomes_project 5 31510751 31543981 - MGP_CBAJ_P0070402 Gm29609 protein_coding protein_coding MGP_CBAJ_T0069829.1 MGP_CBAJ_G0028967.1 mouse_genomes_project 5 16154098 16162049 + MGP_CBAJ_P0069829 protein_coding protein_coding MGP_CBAJ_T0001502.1 MGP_CBAJ_G0001423.1 mouse_genomes_project 5 46609550 46611567 - TEC TEC MGP_CBAJ_T0075024.1 MGP_CBAJ_G0029943.1 mouse_genomes_project 5 155575970 155616896 + MGP_CBAJ_P0075024 Dnaaf5 protein_coding protein_coding MGP_CBAJ_T0075025.1 MGP_CBAJ_G0029943.1 mouse_genomes_project 5 155596240 155609253 + Dnaaf5 protein_coding processed_transcript MGP_CBAJ_T0071873.1 MGP_CBAJ_G0029318.1 mouse_genomes_project 5 82860285 82889779 - MGP_CBAJ_P0071873 Ppat protein_coding nonsense_mediated_decay MGP_CBAJ_T0071874.1 MGP_CBAJ_G0029318.1 mouse_genomes_project 5 82860312 82889785 - MGP_CBAJ_P0071874 Ppat protein_coding protein_coding MGP_CBAJ_T0071875.1 MGP_CBAJ_G0029318.1 mouse_genomes_project 5 82862087 82889372 - Ppat protein_coding retained_intron MGP_CBAJ_T0101150.1 MGP_CBAJ_G0039337.1 mouse_genomes_project 5 167385942 167387046 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101151.1 MGP_CBAJ_G0039337.1 mouse_genomes_project 5 167386465 167387236 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0074900.1 MGP_CBAJ_G0029916.1 mouse_genomes_project 5 154057753 154059812 + MGP_CBAJ_P0074900 protein_coding protein_coding MGP_CBAJ_T0014907.1 MGP_CBAJ_G0013019.1 mouse_genomes_project 5 125524014 125524218 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010584.1 MGP_CBAJ_G0008722.1 mouse_genomes_project 5 127766321 127766382 + Mir7029 miRNA miRNA MGP_CBAJ_T0001608.1 MGP_CBAJ_G0001527.1 mouse_genomes_project 5 70573455 70574356 + TEC TEC MGP_CBAJ_T0008232.1 MGP_CBAJ_G0006683.1 mouse_genomes_project 5 131908456 131914627 + 1700081H04Rik lincRNA lincRNA MGP_CBAJ_T0071631.1 MGP_CBAJ_G0029277.1 mouse_genomes_project 5 76809408 76913427 - MGP_CBAJ_P0071631 Gabra4 protein_coding protein_coding MGP_CBAJ_T0071632.1 MGP_CBAJ_G0029277.1 mouse_genomes_project 5 76810860 76913100 - MGP_CBAJ_P0071632 Gabra4 protein_coding protein_coding MGP_CBAJ_T0071633.1 MGP_CBAJ_G0029277.1 mouse_genomes_project 5 76811265 76913009 - MGP_CBAJ_P0071633 Gabra4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071634.1 MGP_CBAJ_G0029277.1 mouse_genomes_project 5 76811714 76912994 - MGP_CBAJ_P0071634 Gabra4 protein_coding protein_coding MGP_CBAJ_T0071635.1 MGP_CBAJ_G0029277.1 mouse_genomes_project 5 76910314 76912939 - Gabra4 protein_coding retained_intron MGP_CBAJ_T0014928.1 MGP_CBAJ_G0013040.1 mouse_genomes_project 5 136343363 136343762 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014905.1 MGP_CBAJ_G0013017.1 mouse_genomes_project 5 122275799 122276297 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097824.1 MGP_CBAJ_G0036097.1 mouse_genomes_project 5 151376659 151377957 + pseudogene pseudogene MGP_CBAJ_T0071913.1 MGP_CBAJ_G0029328.1 mouse_genomes_project 5 83385413 83448941 - MGP_CBAJ_P0071913 Igfbp7 protein_coding protein_coding MGP_CBAJ_T0071914.1 MGP_CBAJ_G0029328.1 mouse_genomes_project 5 83385421 83448940 - MGP_CBAJ_P0071914 Igfbp7 protein_coding protein_coding MGP_CBAJ_T0001774.1 MGP_CBAJ_G0001692.1 mouse_genomes_project 5 136199949 136200521 - TEC TEC MGP_CBAJ_T0072323.1 MGP_CBAJ_G0029432.1 mouse_genomes_project 5 104960491 105025549 - MGP_CBAJ_P0072323 Cnot6l protein_coding protein_coding MGP_CBAJ_T0072324.1 MGP_CBAJ_G0029432.1 mouse_genomes_project 5 104963268 104974615 - Cnot6l protein_coding retained_intron MGP_CBAJ_T0072325.1 MGP_CBAJ_G0029432.1 mouse_genomes_project 5 104963281 105053185 - MGP_CBAJ_P0072325 Cnot6l protein_coding nonsense_mediated_decay MGP_CBAJ_T0072326.1 MGP_CBAJ_G0029432.1 mouse_genomes_project 5 104963429 105053185 - MGP_CBAJ_P0072326 Cnot6l protein_coding protein_coding MGP_CBAJ_T0072327.1 MGP_CBAJ_G0029432.1 mouse_genomes_project 5 105000152 105022487 - Cnot6l protein_coding retained_intron MGP_CBAJ_T0072328.1 MGP_CBAJ_G0029432.1 mouse_genomes_project 5 105000841 105053172 - MGP_CBAJ_P0072328 Cnot6l protein_coding protein_coding MGP_CBAJ_T0072329.1 MGP_CBAJ_G0029432.1 mouse_genomes_project 5 105022487 105053301 - MGP_CBAJ_P0072329 Cnot6l protein_coding protein_coding MGP_CBAJ_T0072330.1 MGP_CBAJ_G0029432.1 mouse_genomes_project 5 105022523 105059443 - MGP_CBAJ_P0072330 Cnot6l protein_coding protein_coding MGP_CBAJ_T0072331.1 MGP_CBAJ_G0029432.1 mouse_genomes_project 5 105022634 105053193 - MGP_CBAJ_P0072331 Cnot6l protein_coding protein_coding MGP_CBAJ_T0001741.1 MGP_CBAJ_G0001659.1 mouse_genomes_project 5 128127222 128129087 + TEC TEC MGP_CBAJ_T0007960.1 MGP_CBAJ_G0006489.1 mouse_genomes_project 5 24691508 24706721 + 1500035N22Rik lincRNA lincRNA MGP_CBAJ_T0069855.1 MGP_CBAJ_G0028973.1 mouse_genomes_project 5 19845790 19986966 - MGP_CBAJ_P0069855 Phtf2 protein_coding protein_coding MGP_CBAJ_T0069856.1 MGP_CBAJ_G0028973.1 mouse_genomes_project 5 19846790 19864281 - MGP_CBAJ_P0069856 Phtf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069857.1 MGP_CBAJ_G0028973.1 mouse_genomes_project 5 19874894 19955451 - Phtf2 protein_coding processed_transcript MGP_CBAJ_T0069858.1 MGP_CBAJ_G0028973.1 mouse_genomes_project 5 19874897 19898967 - MGP_CBAJ_P0069858 Phtf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069859.1 MGP_CBAJ_G0028973.1 mouse_genomes_project 5 19881121 19986919 - Phtf2 protein_coding retained_intron MGP_CBAJ_T0069860.1 MGP_CBAJ_G0028973.1 mouse_genomes_project 5 19885676 19986920 - Phtf2 protein_coding retained_intron MGP_CBAJ_T0069861.1 MGP_CBAJ_G0028973.1 mouse_genomes_project 5 19898943 19986887 - MGP_CBAJ_P0069861 Phtf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0008168.1 MGP_CBAJ_G0006644.1 mouse_genomes_project 5 121703094 121705338 + Gm26711 lincRNA lincRNA MGP_CBAJ_T0004645.1 MGP_CBAJ_G0004017.1 mouse_genomes_project 5 95453600 95537019 - 1700066N21Rik antisense antisense MGP_CBAJ_T0070026.1 MGP_CBAJ_G0029007.1 mouse_genomes_project 5 24029821 24033475 + MGP_CBAJ_P0070026 Slc4a2 protein_coding protein_coding MGP_CBAJ_T0070027.1 MGP_CBAJ_G0029007.1 mouse_genomes_project 5 24029837 24036012 + Slc4a2 protein_coding processed_transcript MGP_CBAJ_T0070028.1 MGP_CBAJ_G0029007.1 mouse_genomes_project 5 24029843 24035745 + MGP_CBAJ_P0070028 Slc4a2 protein_coding protein_coding MGP_CBAJ_T0070029.1 MGP_CBAJ_G0029007.1 mouse_genomes_project 5 24031218 24049861 + MGP_CBAJ_P0070029 Slc4a2 protein_coding protein_coding MGP_CBAJ_T0070030.1 MGP_CBAJ_G0029007.1 mouse_genomes_project 5 24032693 24035715 + MGP_CBAJ_P0070030 Slc4a2 protein_coding protein_coding MGP_CBAJ_T0070031.1 MGP_CBAJ_G0029007.1 mouse_genomes_project 5 24034070 24049858 + MGP_CBAJ_P0070031 Slc4a2 protein_coding protein_coding MGP_CBAJ_T0070032.1 MGP_CBAJ_G0029007.1 mouse_genomes_project 5 24034125 24035701 + Slc4a2 protein_coding processed_transcript MGP_CBAJ_T0070033.1 MGP_CBAJ_G0029007.1 mouse_genomes_project 5 24034285 24049858 + MGP_CBAJ_P0070033 Slc4a2 protein_coding protein_coding MGP_CBAJ_T0070034.1 MGP_CBAJ_G0029007.1 mouse_genomes_project 5 24034880 24035642 + Slc4a2 protein_coding retained_intron MGP_CBAJ_T0070035.1 MGP_CBAJ_G0029007.1 mouse_genomes_project 5 24037198 24040215 + Slc4a2 protein_coding retained_intron MGP_CBAJ_T0070036.1 MGP_CBAJ_G0029007.1 mouse_genomes_project 5 24041407 24042350 + Slc4a2 protein_coding retained_intron MGP_CBAJ_T0070037.1 MGP_CBAJ_G0029007.1 mouse_genomes_project 5 24042622 24048167 + Slc4a2 protein_coding retained_intron MGP_CBAJ_T0070040.1 MGP_CBAJ_G0029007.1 mouse_genomes_project 5 24048656 24049483 + Slc4a2 protein_coding retained_intron MGP_CBAJ_T0074997.1 MGP_CBAJ_G0029938.1 mouse_genomes_project 5 154968691 154992695 + MGP_CBAJ_P0074997 A430033K04Rik protein_coding protein_coding MGP_CBAJ_T0074998.1 MGP_CBAJ_G0029938.1 mouse_genomes_project 5 154968708 155004380 + MGP_CBAJ_P0074998 A430033K04Rik protein_coding protein_coding MGP_CBAJ_T0074999.1 MGP_CBAJ_G0029938.1 mouse_genomes_project 5 154968726 155000735 + MGP_CBAJ_P0074999 A430033K04Rik protein_coding protein_coding MGP_CBAJ_T0008292.1 MGP_CBAJ_G0006721.1 mouse_genomes_project 5 143059544 143085915 - 5930412G12Rik lincRNA lincRNA MGP_CBAJ_T0008293.1 MGP_CBAJ_G0006721.1 mouse_genomes_project 5 143059544 143068004 - 5930412G12Rik lincRNA lincRNA MGP_CBAJ_T0008294.1 MGP_CBAJ_G0006721.1 mouse_genomes_project 5 143059566 143085915 - 5930412G12Rik lincRNA lincRNA MGP_CBAJ_T0008295.1 MGP_CBAJ_G0006721.1 mouse_genomes_project 5 143059616 143068004 - 5930412G12Rik lincRNA lincRNA MGP_CBAJ_T0008296.1 MGP_CBAJ_G0006721.1 mouse_genomes_project 5 143065685 143085921 - 5930412G12Rik lincRNA lincRNA MGP_CBAJ_T0008297.1 MGP_CBAJ_G0006721.1 mouse_genomes_project 5 143066796 143085882 - 5930412G12Rik lincRNA lincRNA MGP_CBAJ_T0001698.1 MGP_CBAJ_G0001616.1 mouse_genomes_project 5 111674728 111675765 - TEC TEC MGP_CBAJ_T0071426.1 MGP_CBAJ_G0029246.1 mouse_genomes_project 5 69904240 69924430 + MGP_CBAJ_P0071426 Lias protein_coding protein_coding MGP_CBAJ_T0071427.1 MGP_CBAJ_G0029246.1 mouse_genomes_project 5 69904278 69924010 + MGP_CBAJ_P0071427 Lias protein_coding protein_coding MGP_CBAJ_T0071428.1 MGP_CBAJ_G0029246.1 mouse_genomes_project 5 69904287 69911189 + Lias protein_coding retained_intron MGP_CBAJ_T0071429.1 MGP_CBAJ_G0029246.1 mouse_genomes_project 5 69904307 69910619 + Lias protein_coding retained_intron MGP_CBAJ_T0071430.1 MGP_CBAJ_G0029246.1 mouse_genomes_project 5 69904308 69912691 + MGP_CBAJ_P0071430 Lias protein_coding protein_coding MGP_CBAJ_T0071431.1 MGP_CBAJ_G0029246.1 mouse_genomes_project 5 69912546 69914920 + Lias protein_coding retained_intron MGP_CBAJ_T0001475.1 MGP_CBAJ_G0001396.1 mouse_genomes_project 5 37763051 37765608 + TEC TEC MGP_CBAJ_T0069901.1 MGP_CBAJ_G0028983.1 mouse_genomes_project 5 20858207 20860860 + protein_coding processed_transcript MGP_CBAJ_T0069902.1 MGP_CBAJ_G0028983.1 mouse_genomes_project 5 20860709 20864210 + protein_coding retained_intron MGP_CBAJ_T0007934.1 MGP_CBAJ_G0006471.1 mouse_genomes_project 5 106447 125211 + lincRNA lincRNA MGP_CBAJ_T0004614.1 MGP_CBAJ_G0003990.1 mouse_genomes_project 5 56443663 56447134 - Gm10441 antisense antisense MGP_CBAJ_T0099340.1 MGP_CBAJ_G0037595.1 mouse_genomes_project 5 30795267 30795374 - Gm25666 snRNA snRNA MGP_CBAJ_T0074170.1 MGP_CBAJ_G0029783.1 mouse_genomes_project 5 143086066 143089314 + MGP_CBAJ_P0074170 Fzd10 protein_coding protein_coding MGP_CBAJ_T0072411.1 MGP_CBAJ_G0029453.1 mouse_genomes_project 5 109420583 109510477 - MGP_CBAJ_P0072411 Tmem150c protein_coding protein_coding MGP_CBAJ_T0072412.1 MGP_CBAJ_G0029453.1 mouse_genomes_project 5 109429767 109510103 - Tmem150c protein_coding retained_intron MGP_CBAJ_T0072413.1 MGP_CBAJ_G0029453.1 mouse_genomes_project 5 109429768 109471019 - Tmem150c protein_coding retained_intron MGP_CBAJ_T0072414.1 MGP_CBAJ_G0029453.1 mouse_genomes_project 5 109431827 109510239 - Tmem150c protein_coding retained_intron MGP_CBAJ_T0072415.1 MGP_CBAJ_G0029453.1 mouse_genomes_project 5 109431948 109509952 - MGP_CBAJ_P0072415 Tmem150c protein_coding protein_coding MGP_CBAJ_T0072316.1 MGP_CBAJ_G0029430.1 mouse_genomes_project 5 101662750 101671723 + MGP_CBAJ_P0072316 Ccng2 protein_coding protein_coding MGP_CBAJ_T0072317.1 MGP_CBAJ_G0029430.1 mouse_genomes_project 5 101663082 101663950 + Ccng2 protein_coding processed_transcript MGP_CBAJ_T0072318.1 MGP_CBAJ_G0029430.1 mouse_genomes_project 5 101663094 101665211 + Ccng2 protein_coding processed_transcript MGP_CBAJ_T0072319.1 MGP_CBAJ_G0029430.1 mouse_genomes_project 5 101663132 101671717 + Ccng2 protein_coding retained_intron MGP_CBAJ_T0072320.1 MGP_CBAJ_G0029430.1 mouse_genomes_project 5 101663807 101671716 + MGP_CBAJ_P0072320 Ccng2 protein_coding protein_coding MGP_CBAJ_T0072321.1 MGP_CBAJ_G0029430.1 mouse_genomes_project 5 101664202 101668983 + Ccng2 protein_coding retained_intron MGP_CBAJ_T0004762.1 MGP_CBAJ_G0004095.1 mouse_genomes_project 5 143269265 143277580 + Gm42875 antisense antisense MGP_CBAJ_T0071876.1 MGP_CBAJ_G0029319.1 mouse_genomes_project 5 82889513 82908042 + MGP_CBAJ_P0071876 Paics protein_coding protein_coding MGP_CBAJ_T0071877.1 MGP_CBAJ_G0029319.1 mouse_genomes_project 5 82889554 82908046 + MGP_CBAJ_P0071877 Paics protein_coding protein_coding MGP_CBAJ_T0071878.1 MGP_CBAJ_G0029319.1 mouse_genomes_project 5 82889574 82907850 + MGP_CBAJ_P0071878 Paics protein_coding protein_coding MGP_CBAJ_T0071879.1 MGP_CBAJ_G0029319.1 mouse_genomes_project 5 82889588 82899908 + MGP_CBAJ_P0071879 Paics protein_coding protein_coding MGP_CBAJ_T0071880.1 MGP_CBAJ_G0029319.1 mouse_genomes_project 5 82889983 82903037 + MGP_CBAJ_P0071880 Paics protein_coding nonsense_mediated_decay MGP_CBAJ_T0071881.1 MGP_CBAJ_G0029319.1 mouse_genomes_project 5 82902033 82903528 + Paics protein_coding retained_intron MGP_CBAJ_T0071882.1 MGP_CBAJ_G0029319.1 mouse_genomes_project 5 82906693 82907378 + Paics protein_coding retained_intron MGP_CBAJ_T0014819.1 MGP_CBAJ_G0012931.1 mouse_genomes_project 5 84001219 84001556 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001795.1 MGP_CBAJ_G0001712.1 mouse_genomes_project 5 141986432 141987206 + TEC TEC MGP_CBAJ_T0008004.1 MGP_CBAJ_G0006515.1 mouse_genomes_project 5 39615253 39620096 + 4930487D11Rik lincRNA lincRNA MGP_CBAJ_T0001782.1 MGP_CBAJ_G0001700.1 mouse_genomes_project 5 137562300 137563639 - TEC TEC MGP_CBAJ_T0001657.1 MGP_CBAJ_G0001575.1 mouse_genomes_project 5 79877167 79877639 - TEC TEC MGP_CBAJ_T0004653.1 MGP_CBAJ_G0004024.1 mouse_genomes_project 5 105667190 105671026 - Gm42604 antisense antisense MGP_CBAJ_T0101944.1 MGP_CBAJ_G0039975.1 mouse_genomes_project 5 95823260 95888736 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0008024.1 MGP_CBAJ_G0006532.1 mouse_genomes_project 5 48025698 48031287 - 4930405L22Rik lincRNA lincRNA MGP_CBAJ_T0075408.1 MGP_CBAJ_G0030024.1 mouse_genomes_project 5 162485830 162503063 - MGP_CBAJ_P0075408 Pdap1 protein_coding protein_coding MGP_CBAJ_T0075409.1 MGP_CBAJ_G0030024.1 mouse_genomes_project 5 162487383 162499535 - Pdap1 protein_coding processed_transcript MGP_CBAJ_T0075410.1 MGP_CBAJ_G0030024.1 mouse_genomes_project 5 162488670 162492793 - Pdap1 protein_coding retained_intron MGP_CBAJ_T0075411.1 MGP_CBAJ_G0030024.1 mouse_genomes_project 5 162490500 162492947 - Pdap1 protein_coding retained_intron MGP_CBAJ_T0075412.1 MGP_CBAJ_G0030024.1 mouse_genomes_project 5 162499416 162502823 - Pdap1 protein_coding retained_intron MGP_CBAJ_T0014733.1 MGP_CBAJ_G0012845.1 mouse_genomes_project 5 40755153 40756052 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008259.1 MGP_CBAJ_G0006700.1 mouse_genomes_project 5 137972082 138041797 + Gm34086 lincRNA lincRNA MGP_CBAJ_T0017879.1 MGP_CBAJ_G0015337.1 mouse_genomes_project 5 45953324 45976652 - Gm42716 processed_transcript sense_intronic MGP_CBAJ_T0017880.1 MGP_CBAJ_G0015337.1 mouse_genomes_project 5 45969480 45976596 - Gm42716 processed_transcript sense_intronic MGP_CBAJ_T0017881.1 MGP_CBAJ_G0015337.1 mouse_genomes_project 5 45976147 45977917 - Gm42716 processed_transcript retained_intron MGP_CBAJ_T0072906.1 MGP_CBAJ_G0029555.1 mouse_genomes_project 5 122013487 122122497 - MGP_CBAJ_P0072906 Ep400 protein_coding protein_coding MGP_CBAJ_T0072907.1 MGP_CBAJ_G0029555.1 mouse_genomes_project 5 122013487 122122687 - MGP_CBAJ_P0072907 Ep400 protein_coding protein_coding MGP_CBAJ_T0072908.1 MGP_CBAJ_G0029555.1 mouse_genomes_project 5 122013492 122122687 - MGP_CBAJ_P0072908 Ep400 protein_coding protein_coding MGP_CBAJ_T0072909.1 MGP_CBAJ_G0029555.1 mouse_genomes_project 5 122016484 122017303 - Ep400 protein_coding processed_transcript MGP_CBAJ_T0072910.1 MGP_CBAJ_G0029555.1 mouse_genomes_project 5 122016648 122017922 - Ep400 protein_coding retained_intron MGP_CBAJ_T0072911.1 MGP_CBAJ_G0029555.1 mouse_genomes_project 5 122036982 122041244 - Ep400 protein_coding retained_intron MGP_CBAJ_T0072912.1 MGP_CBAJ_G0029555.1 mouse_genomes_project 5 122045037 122048209 - Ep400 protein_coding retained_intron MGP_CBAJ_T0072913.1 MGP_CBAJ_G0029555.1 mouse_genomes_project 5 122046416 122057019 - MGP_CBAJ_P0072913 Ep400 protein_coding protein_coding MGP_CBAJ_T0072914.1 MGP_CBAJ_G0029555.1 mouse_genomes_project 5 122088249 122122555 - MGP_CBAJ_P0072914 Ep400 protein_coding protein_coding MGP_CBAJ_T0072915.1 MGP_CBAJ_G0029555.1 mouse_genomes_project 5 122088647 122122125 - MGP_CBAJ_P0072915 Ep400 protein_coding protein_coding MGP_CBAJ_T0072916.1 MGP_CBAJ_G0029555.1 mouse_genomes_project 5 122107860 122122687 - Ep400 protein_coding processed_transcript MGP_CBAJ_T0069798.1 MGP_CBAJ_G0028957.1 mouse_genomes_project 5 12064524 12069123 + MGP_CBAJ_P0069798 protein_coding protein_coding MGP_CBAJ_T0008017.1 MGP_CBAJ_G0006526.1 mouse_genomes_project 5 45669026 45670065 - Gm42555 lincRNA lincRNA MGP_CBAJ_T0070473.1 MGP_CBAJ_G0029088.1 mouse_genomes_project 5 31630762 31675891 - MGP_CBAJ_P0070473 Ift172 protein_coding protein_coding MGP_CBAJ_T0070474.1 MGP_CBAJ_G0029088.1 mouse_genomes_project 5 31630765 31632139 - Ift172 protein_coding retained_intron MGP_CBAJ_T0070475.1 MGP_CBAJ_G0029088.1 mouse_genomes_project 5 31631038 31632296 - Ift172 protein_coding retained_intron MGP_CBAJ_T0070476.1 MGP_CBAJ_G0029088.1 mouse_genomes_project 5 31641294 31642060 - Ift172 protein_coding retained_intron MGP_CBAJ_T0070477.1 MGP_CBAJ_G0029088.1 mouse_genomes_project 5 31642168 31644737 - Ift172 protein_coding retained_intron MGP_CBAJ_T0070478.1 MGP_CBAJ_G0029088.1 mouse_genomes_project 5 31643645 31644445 - Ift172 protein_coding retained_intron MGP_CBAJ_T0070479.1 MGP_CBAJ_G0029088.1 mouse_genomes_project 5 31647152 31665109 - MGP_CBAJ_P0070479 Ift172 protein_coding protein_coding MGP_CBAJ_T0070480.1 MGP_CBAJ_G0029088.1 mouse_genomes_project 5 31656161 31666130 - MGP_CBAJ_P0070480 Ift172 protein_coding protein_coding MGP_CBAJ_T0070481.1 MGP_CBAJ_G0029088.1 mouse_genomes_project 5 31660197 31675823 - Ift172 protein_coding retained_intron MGP_CBAJ_T0070482.1 MGP_CBAJ_G0029088.1 mouse_genomes_project 5 31670154 31671267 - Ift172 protein_coding retained_intron MGP_CBAJ_T0070483.1 MGP_CBAJ_G0029088.1 mouse_genomes_project 5 31670794 31675900 - MGP_CBAJ_P0070483 Ift172 protein_coding protein_coding MGP_CBAJ_T0072553.1 MGP_CBAJ_G0029480.1 mouse_genomes_project 5 114041966 114053560 + MGP_CBAJ_P0072553 Dmp1 protein_coding protein_coding MGP_CBAJ_T0101953.1 MGP_CBAJ_G0039984.1 mouse_genomes_project 5 140012706 140013371 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010548.1 MGP_CBAJ_G0008686.1 mouse_genomes_project 5 34718179 34718241 - Mir7024 miRNA miRNA MGP_CBAJ_T0074121.1 MGP_CBAJ_G0029772.1 mouse_genomes_project 5 139364974 139437175 - MGP_CBAJ_P0074121 Scarb1 protein_coding protein_coding MGP_CBAJ_T0074122.1 MGP_CBAJ_G0029772.1 mouse_genomes_project 5 139364976 139437152 - MGP_CBAJ_P0074122 Scarb1 protein_coding protein_coding MGP_CBAJ_T0074123.1 MGP_CBAJ_G0029772.1 mouse_genomes_project 5 139365453 139385195 - MGP_CBAJ_P0074123 Scarb1 protein_coding protein_coding MGP_CBAJ_T0074124.1 MGP_CBAJ_G0029772.1 mouse_genomes_project 5 139365674 139375238 - Scarb1 protein_coding processed_transcript MGP_CBAJ_T0074125.1 MGP_CBAJ_G0029772.1 mouse_genomes_project 5 139374028 139377750 - Scarb1 protein_coding retained_intron MGP_CBAJ_T0074126.1 MGP_CBAJ_G0029772.1 mouse_genomes_project 5 139374433 139437100 - Scarb1 protein_coding retained_intron MGP_CBAJ_T0074127.1 MGP_CBAJ_G0029772.1 mouse_genomes_project 5 139390787 139398011 - Scarb1 protein_coding retained_intron MGP_CBAJ_T0074128.1 MGP_CBAJ_G0029772.1 mouse_genomes_project 5 139393828 139412788 - Scarb1 protein_coding processed_transcript MGP_CBAJ_T0074129.1 MGP_CBAJ_G0029772.1 mouse_genomes_project 5 139396657 139436088 - MGP_CBAJ_P0074129 Scarb1 protein_coding protein_coding MGP_CBAJ_T0074130.1 MGP_CBAJ_G0029772.1 mouse_genomes_project 5 139397717 139422413 - Scarb1 protein_coding processed_transcript MGP_CBAJ_T0074131.1 MGP_CBAJ_G0029772.1 mouse_genomes_project 5 139421406 139423862 - Scarb1 protein_coding retained_intron MGP_CBAJ_T0014753.1 MGP_CBAJ_G0012865.1 mouse_genomes_project 5 53664842 53665323 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0074059.1 MGP_CBAJ_G0029762.1 mouse_genomes_project 5 138571273 138582026 + MGP_CBAJ_P0074059 Tmed2 protein_coding protein_coding MGP_CBAJ_T0074060.1 MGP_CBAJ_G0029762.1 mouse_genomes_project 5 138571533 138579595 + MGP_CBAJ_P0074060 Tmed2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074061.1 MGP_CBAJ_G0029762.1 mouse_genomes_project 5 138571914 138572331 + Tmed2 protein_coding retained_intron MGP_CBAJ_T0100637.1 MGP_CBAJ_G0038892.1 mouse_genomes_project 5 130888270 130888402 + Gm25076 snoRNA snoRNA MGP_CBAJ_T0014682.1 MGP_CBAJ_G0012794.1 mouse_genomes_project 5 22813085 22813209 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0072803.1 MGP_CBAJ_G0029531.1 mouse_genomes_project 5 119288913 119308452 - MGP_CBAJ_P0072803 protein_coding protein_coding MGP_CBAJ_T0072804.1 MGP_CBAJ_G0029531.1 mouse_genomes_project 5 119288994 119308415 - MGP_CBAJ_P0072804 protein_coding protein_coding MGP_CBAJ_T0072805.1 MGP_CBAJ_G0029531.1 mouse_genomes_project 5 119289432 119343186 - MGP_CBAJ_P0072805 protein_coding protein_coding MGP_CBAJ_T0072806.1 MGP_CBAJ_G0029531.1 mouse_genomes_project 5 119291266 119306945 - MGP_CBAJ_P0072806 protein_coding protein_coding MGP_CBAJ_T0075243.1 MGP_CBAJ_G0029989.1 mouse_genomes_project 5 160232208 160240750 - MGP_CBAJ_P0075243 Rbak protein_coding protein_coding MGP_CBAJ_T0075244.1 MGP_CBAJ_G0029989.1 mouse_genomes_project 5 160232208 160240795 - MGP_CBAJ_P0075244 Rbak protein_coding protein_coding MGP_CBAJ_T0075245.1 MGP_CBAJ_G0029989.1 mouse_genomes_project 5 160232209 160236757 - Rbak protein_coding retained_intron MGP_CBAJ_T0075246.1 MGP_CBAJ_G0029989.1 mouse_genomes_project 5 160238988 160240752 - Rbak protein_coding retained_intron MGP_CBAJ_T0008352.1 MGP_CBAJ_G0006767.1 mouse_genomes_project 5 167187829 167193644 + Gm15408 lincRNA lincRNA MGP_CBAJ_T0101938.1 MGP_CBAJ_G0039969.1 mouse_genomes_project 5 94518897 94519761 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0011466.1 MGP_CBAJ_G0009604.1 mouse_genomes_project 5 40688354 40688600 + Gm25505 misc_RNA misc_RNA MGP_CBAJ_T0014859.1 MGP_CBAJ_G0012971.1 mouse_genomes_project 5 107161666 107162282 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0069683.1 MGP_CBAJ_G0028941.1 mouse_genomes_project 5 5530253 5551928 + MGP_CBAJ_P0069683 Steap4 protein_coding protein_coding MGP_CBAJ_T0014629.1 MGP_CBAJ_G0012741.1 mouse_genomes_project 5 1932976 1933808 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001692.1 MGP_CBAJ_G0001610.1 mouse_genomes_project 5 110254945 110257242 + TEC TEC MGP_CBAJ_T0075214.1 MGP_CBAJ_G0029985.1 mouse_genomes_project 5 159857446 159885600 - MGP_CBAJ_P0075214 Fbxl18 protein_coding protein_coding MGP_CBAJ_T0075215.1 MGP_CBAJ_G0029985.1 mouse_genomes_project 5 159862271 159863380 - Fbxl18 protein_coding retained_intron MGP_CBAJ_T0075216.1 MGP_CBAJ_G0029985.1 mouse_genomes_project 5 159862284 159885417 - MGP_CBAJ_P0075216 Fbxl18 protein_coding protein_coding MGP_CBAJ_T0075217.1 MGP_CBAJ_G0029985.1 mouse_genomes_project 5 159862547 159862989 - Fbxl18 protein_coding processed_transcript MGP_CBAJ_T0075218.1 MGP_CBAJ_G0029985.1 mouse_genomes_project 5 159872759 159885600 - Fbxl18 protein_coding retained_intron MGP_CBAJ_T0001743.1 MGP_CBAJ_G0001661.1 mouse_genomes_project 5 128789399 128790774 - TEC TEC MGP_CBAJ_T0004690.1 MGP_CBAJ_G0004046.1 mouse_genomes_project 5 121640153 121642151 - Gm15792 antisense antisense MGP_CBAJ_T0001532.1 MGP_CBAJ_G0001452.1 mouse_genomes_project 5 51419161 51420456 - TEC TEC MGP_CBAJ_T0001535.1 MGP_CBAJ_G0001455.1 mouse_genomes_project 5 51474930 51478394 + TEC TEC MGP_CBAJ_T0071340.1 MGP_CBAJ_G0029228.1 mouse_genomes_project 5 65871773 65874114 + MGP_CBAJ_P0071340 G6pd2 protein_coding protein_coding MGP_CBAJ_T0098414.1 MGP_CBAJ_G0036680.1 mouse_genomes_project 5 121500175 121500883 + Gm43138 sense_intronic sense_intronic MGP_CBAJ_T0075176.1 MGP_CBAJ_G0029976.1 mouse_genomes_project 5 157983791 159051765 + MGP_CBAJ_P0075176 Sdk1 protein_coding protein_coding MGP_CBAJ_T0075177.1 MGP_CBAJ_G0029976.1 mouse_genomes_project 5 157984219 158350208 + Sdk1 protein_coding retained_intron MGP_CBAJ_T0075178.1 MGP_CBAJ_G0029976.1 mouse_genomes_project 5 158125226 158768239 + Sdk1 protein_coding retained_intron MGP_CBAJ_T0075179.1 MGP_CBAJ_G0029976.1 mouse_genomes_project 5 158637503 159049373 + MGP_CBAJ_P0075179 Sdk1 protein_coding protein_coding MGP_CBAJ_T0069547.1 MGP_CBAJ_G0028921.1 mouse_genomes_project 5 539523 552270 + MGP_CBAJ_P0069547 1700109H08Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0069548.1 MGP_CBAJ_G0028921.1 mouse_genomes_project 5 539630 552285 + MGP_CBAJ_P0069548 1700109H08Rik protein_coding protein_coding MGP_CBAJ_T0069549.1 MGP_CBAJ_G0028921.1 mouse_genomes_project 5 543634 552285 + MGP_CBAJ_P0069549 1700109H08Rik protein_coding protein_coding MGP_CBAJ_T0069550.1 MGP_CBAJ_G0028921.1 mouse_genomes_project 5 546151 548378 + 1700109H08Rik protein_coding retained_intron MGP_CBAJ_T0069551.1 MGP_CBAJ_G0028921.1 mouse_genomes_project 5 548426 552273 + MGP_CBAJ_P0069551 1700109H08Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0004605.1 MGP_CBAJ_G0003983.1 mouse_genomes_project 5 47486314 47505926 + Gm42413 antisense antisense MGP_CBAJ_T0014656.1 MGP_CBAJ_G0012768.1 mouse_genomes_project 5 15604608 15604861 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004812.1 MGP_CBAJ_G0004131.1 mouse_genomes_project 5 167704242 167710669 - antisense antisense MGP_CBAJ_T0014858.1 MGP_CBAJ_G0012970.1 mouse_genomes_project 5 107136157 107136467 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101940.1 MGP_CBAJ_G0039971.1 mouse_genomes_project 5 94632012 94642036 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0001666.1 MGP_CBAJ_G0001584.1 mouse_genomes_project 5 82556211 82558643 - TEC TEC MGP_CBAJ_T0001562.1 MGP_CBAJ_G0001482.1 mouse_genomes_project 5 57888316 57891017 + TEC TEC MGP_CBAJ_T0008144.1 MGP_CBAJ_G0006626.1 mouse_genomes_project 5 115490778 115495404 + Gm42749 lincRNA lincRNA MGP_CBAJ_T0008145.1 MGP_CBAJ_G0006626.1 mouse_genomes_project 5 115494777 115497162 + Gm42749 lincRNA lincRNA MGP_CBAJ_T0008298.1 MGP_CBAJ_G0006722.1 mouse_genomes_project 5 143954454 143955614 + Gm43001 lincRNA lincRNA MGP_CBAJ_T0008299.1 MGP_CBAJ_G0006722.1 mouse_genomes_project 5 143955012 143955525 + Gm43001 lincRNA lincRNA MGP_CBAJ_T0001424.1 MGP_CBAJ_G0001348.1 mouse_genomes_project 5 13199944 13205120 + TEC TEC MGP_CBAJ_T0099348.1 MGP_CBAJ_G0037603.1 mouse_genomes_project 5 41901411 41901591 - Gm23022 snRNA snRNA MGP_CBAJ_T0014870.1 MGP_CBAJ_G0012982.1 mouse_genomes_project 5 112656599 112656854 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011704.1 MGP_CBAJ_G0009820.1 mouse_genomes_project 5 115408238 115436725 - MGP_CBAJ_P0011704 Gbp11 polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0014956.1 MGP_CBAJ_G0013068.1 mouse_genomes_project 5 154865158 154866016 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099402.1 MGP_CBAJ_G0037657.1 mouse_genomes_project 5 151658497 151658667 - Gm22214 snRNA snRNA MGP_CBAJ_T0001483.1 MGP_CBAJ_G0001404.1 mouse_genomes_project 5 44932690 44937187 - TEC TEC MGP_CBAJ_T0007963.1 MGP_CBAJ_G0006492.1 mouse_genomes_project 5 25472578 25472928 - Gm10062 lincRNA lincRNA MGP_CBAJ_T0007965.1 MGP_CBAJ_G0006492.1 mouse_genomes_project 5 25472585 25474047 - Gm10062 lincRNA lincRNA MGP_CBAJ_T0014917.1 MGP_CBAJ_G0013029.1 mouse_genomes_project 5 127413780 127413918 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0075065.1 MGP_CBAJ_G0029949.1 mouse_genomes_project 5 155820707 155944400 - MGP_CBAJ_P0075065 3110082I17Rik protein_coding protein_coding MGP_CBAJ_T0075066.1 MGP_CBAJ_G0029949.1 mouse_genomes_project 5 155820707 155944425 - MGP_CBAJ_P0075066 3110082I17Rik protein_coding protein_coding MGP_CBAJ_T0075067.1 MGP_CBAJ_G0029949.1 mouse_genomes_project 5 155824576 155944409 - 3110082I17Rik protein_coding retained_intron MGP_CBAJ_T0075077.1 MGP_CBAJ_G0029949.1 mouse_genomes_project 5 155885776 155939429 - 3110082I17Rik protein_coding processed_transcript MGP_CBAJ_T0008026.1 MGP_CBAJ_G0006534.1 mouse_genomes_project 5 53099729 53250152 + Gm43016 lincRNA lincRNA MGP_CBAJ_T0072484.1 MGP_CBAJ_G0029465.1 mouse_genomes_project 5 111363268 111425226 + MGP_CBAJ_P0072484 Cds1 protein_coding protein_coding MGP_CBAJ_T0072485.1 MGP_CBAJ_G0029465.1 mouse_genomes_project 5 111407962 111422815 + Cds1 protein_coding retained_intron MGP_CBAJ_T0004610.1 MGP_CBAJ_G0003986.1 mouse_genomes_project 5 50932153 50942215 + Gm20700 antisense antisense MGP_CBAJ_T0008379.1 MGP_CBAJ_G0006784.1 mouse_genomes_project 5 169393679 169417203 - Gm43298 lincRNA lincRNA MGP_CBAJ_T0072454.1 MGP_CBAJ_G0029460.1 mouse_genomes_project 5 110216055 110254795 - MGP_CBAJ_P0072454 Helq protein_coding protein_coding MGP_CBAJ_T0072455.1 MGP_CBAJ_G0029460.1 mouse_genomes_project 5 110216061 110219349 - Helq protein_coding retained_intron MGP_CBAJ_T0072456.1 MGP_CBAJ_G0029460.1 mouse_genomes_project 5 110216357 110254665 - MGP_CBAJ_P0072456 Helq protein_coding protein_coding MGP_CBAJ_T0072457.1 MGP_CBAJ_G0029460.1 mouse_genomes_project 5 110216366 110220724 - Helq protein_coding retained_intron MGP_CBAJ_T0072458.1 MGP_CBAJ_G0029460.1 mouse_genomes_project 5 110220647 110227946 - MGP_CBAJ_P0072458 Helq protein_coding nonsense_mediated_decay MGP_CBAJ_T0072459.1 MGP_CBAJ_G0029460.1 mouse_genomes_project 5 110225457 110228030 - Helq protein_coding retained_intron MGP_CBAJ_T0072460.1 MGP_CBAJ_G0029460.1 mouse_genomes_project 5 110232294 110236904 - Helq protein_coding retained_intron MGP_CBAJ_T0072461.1 MGP_CBAJ_G0029460.1 mouse_genomes_project 5 110237002 110248924 - Helq protein_coding processed_transcript MGP_CBAJ_T0072462.1 MGP_CBAJ_G0029460.1 mouse_genomes_project 5 110237083 110254774 - MGP_CBAJ_P0072462 Helq protein_coding nonsense_mediated_decay MGP_CBAJ_T0072463.1 MGP_CBAJ_G0029460.1 mouse_genomes_project 5 110247969 110249250 - Helq protein_coding retained_intron MGP_CBAJ_T0001617.1 MGP_CBAJ_G0001536.1 mouse_genomes_project 5 71211601 71213540 - TEC TEC MGP_CBAJ_T0001760.1 MGP_CBAJ_G0001678.1 mouse_genomes_project 5 133810955 133812228 + TEC TEC MGP_CBAJ_T0011462.1 MGP_CBAJ_G0009600.1 mouse_genomes_project 5 24503276 24503521 - Gm25363 misc_RNA misc_RNA MGP_CBAJ_T0008082.1 MGP_CBAJ_G0006580.1 mouse_genomes_project 5 83552545 83561179 + Gm42761 lincRNA lincRNA MGP_CBAJ_T0011460.1 MGP_CBAJ_G0009598.1 mouse_genomes_project 5 6683271 6683413 - Gm27941 misc_RNA misc_RNA MGP_CBAJ_T0014884.1 MGP_CBAJ_G0012996.1 mouse_genomes_project 5 117558472 117559217 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004585.1 MGP_CBAJ_G0003969.1 mouse_genomes_project 5 36622301 36629786 - 4931431C16Rik antisense antisense MGP_CBAJ_T0004688.1 MGP_CBAJ_G0004044.1 mouse_genomes_project 5 121524019 121524613 - Gm43137 antisense antisense MGP_CBAJ_T0070200.1 MGP_CBAJ_G0029045.1 mouse_genomes_project 5 29903947 29937124 + MGP_CBAJ_P0070200 Dnajb6 protein_coding protein_coding MGP_CBAJ_T0070201.1 MGP_CBAJ_G0029045.1 mouse_genomes_project 5 29903977 29958279 + MGP_CBAJ_P0070201 Dnajb6 protein_coding unknown_likely_coding MGP_CBAJ_T0070202.1 MGP_CBAJ_G0029045.1 mouse_genomes_project 5 29903996 29936383 + MGP_CBAJ_P0070202 Dnajb6 protein_coding protein_coding MGP_CBAJ_T0070203.1 MGP_CBAJ_G0029045.1 mouse_genomes_project 5 29904002 29927554 + MGP_CBAJ_P0070203 Dnajb6 protein_coding protein_coding MGP_CBAJ_T0070204.1 MGP_CBAJ_G0029045.1 mouse_genomes_project 5 29904031 29907097 + Dnajb6 protein_coding processed_transcript MGP_CBAJ_T0070205.1 MGP_CBAJ_G0029045.1 mouse_genomes_project 5 29904040 30010978 + MGP_CBAJ_P0070205 Dnajb6 protein_coding protein_coding MGP_CBAJ_T0070206.1 MGP_CBAJ_G0029045.1 mouse_genomes_project 5 29905273 29916450 + MGP_CBAJ_P0070206 Dnajb6 protein_coding protein_coding MGP_CBAJ_T0070207.1 MGP_CBAJ_G0029045.1 mouse_genomes_project 5 29920318 29922335 + Dnajb6 protein_coding retained_intron MGP_CBAJ_T0070208.1 MGP_CBAJ_G0029045.1 mouse_genomes_project 5 29923936 29927545 + Dnajb6 protein_coding processed_transcript MGP_CBAJ_T0070209.1 MGP_CBAJ_G0029045.1 mouse_genomes_project 5 29933772 29935219 + Dnajb6 protein_coding retained_intron MGP_CBAJ_T0070210.1 MGP_CBAJ_G0029045.1 mouse_genomes_project 5 29934066 29954817 + MGP_CBAJ_P0070210 Dnajb6 protein_coding protein_coding MGP_CBAJ_T0071534.1 MGP_CBAJ_G0029259.1 mouse_genomes_project 5 71394506 71405589 + MGP_CBAJ_P0071534 Uchl1 protein_coding protein_coding MGP_CBAJ_T0071535.1 MGP_CBAJ_G0029259.1 mouse_genomes_project 5 71394657 71395263 + Uchl1 protein_coding retained_intron MGP_CBAJ_T0071536.1 MGP_CBAJ_G0029259.1 mouse_genomes_project 5 71395309 71405584 + Uchl1 protein_coding retained_intron MGP_CBAJ_T0071537.1 MGP_CBAJ_G0029259.1 mouse_genomes_project 5 71402051 71405292 + Uchl1 protein_coding retained_intron MGP_CBAJ_T0001828.1 MGP_CBAJ_G0001745.1 mouse_genomes_project 5 147353996 147356298 - TEC TEC MGP_CBAJ_T0073754.1 MGP_CBAJ_G0029718.1 mouse_genomes_project 5 136282111 136328011 + MGP_CBAJ_P0073754 P2rx7 protein_coding protein_coding MGP_CBAJ_T0073755.1 MGP_CBAJ_G0029718.1 mouse_genomes_project 5 136282111 136328003 + MGP_CBAJ_P0073755 P2rx7 protein_coding protein_coding MGP_CBAJ_T0073756.1 MGP_CBAJ_G0029718.1 mouse_genomes_project 5 136282139 136335176 + MGP_CBAJ_P0073756 P2rx7 protein_coding protein_coding MGP_CBAJ_T0073757.1 MGP_CBAJ_G0029718.1 mouse_genomes_project 5 136282209 136293317 + MGP_CBAJ_P0073757 P2rx7 protein_coding protein_coding MGP_CBAJ_T0073758.1 MGP_CBAJ_G0029718.1 mouse_genomes_project 5 136282365 136285995 + P2rx7 protein_coding processed_transcript MGP_CBAJ_T0073759.1 MGP_CBAJ_G0029718.1 mouse_genomes_project 5 136288478 136325087 + P2rx7 protein_coding processed_transcript MGP_CBAJ_T0073760.1 MGP_CBAJ_G0029718.1 mouse_genomes_project 5 136325655 136327238 + P2rx7 protein_coding processed_transcript MGP_CBAJ_T0073761.1 MGP_CBAJ_G0029718.1 mouse_genomes_project 5 136325895 136327998 + P2rx7 protein_coding retained_intron MGP_CBAJ_T0073420.1 MGP_CBAJ_G0029651.1 mouse_genomes_project 5 129870739 129882374 - Rfc5 protein_coding retained_intron MGP_CBAJ_T0073421.1 MGP_CBAJ_G0029651.1 mouse_genomes_project 5 129870739 129882399 - MGP_CBAJ_P0073421 Rfc5 protein_coding protein_coding MGP_CBAJ_T0073422.1 MGP_CBAJ_G0029651.1 mouse_genomes_project 5 129872969 129874204 - Rfc5 protein_coding retained_intron MGP_CBAJ_T0073423.1 MGP_CBAJ_G0029651.1 mouse_genomes_project 5 129873193 129873569 - Rfc5 protein_coding retained_intron MGP_CBAJ_T0073424.1 MGP_CBAJ_G0029651.1 mouse_genomes_project 5 129875068 129880184 - Rfc5 protein_coding retained_intron MGP_CBAJ_T0073425.1 MGP_CBAJ_G0029651.1 mouse_genomes_project 5 129879633 129882397 - MGP_CBAJ_P0073425 Rfc5 protein_coding protein_coding MGP_CBAJ_T0073799.1 MGP_CBAJ_G0029722.1 mouse_genomes_project 5 136539181 136564290 + MGP_CBAJ_P0073799 Rnf34 protein_coding protein_coding MGP_CBAJ_T0073800.1 MGP_CBAJ_G0029722.1 mouse_genomes_project 5 136539290 136557871 + MGP_CBAJ_P0073800 Rnf34 protein_coding protein_coding MGP_CBAJ_T0072352.1 MGP_CBAJ_G0029437.1 mouse_genomes_project 5 106061682 106092758 - MGP_CBAJ_P0072352 Paqr3 protein_coding protein_coding MGP_CBAJ_T0072353.1 MGP_CBAJ_G0029437.1 mouse_genomes_project 5 106066333 106092735 - MGP_CBAJ_P0072353 Paqr3 protein_coding protein_coding MGP_CBAJ_T0072354.1 MGP_CBAJ_G0029437.1 mouse_genomes_project 5 106077117 106078957 - Paqr3 protein_coding retained_intron MGP_CBAJ_T0072355.1 MGP_CBAJ_G0029437.1 mouse_genomes_project 5 106078709 106092605 - MGP_CBAJ_P0072355 Paqr3 protein_coding protein_coding MGP_CBAJ_T0072356.1 MGP_CBAJ_G0029437.1 mouse_genomes_project 5 106083317 106092758 - MGP_CBAJ_P0072356 Paqr3 protein_coding protein_coding MGP_CBAJ_T0072357.1 MGP_CBAJ_G0029437.1 mouse_genomes_project 5 106085755 106092746 - Paqr3 protein_coding retained_intron MGP_CBAJ_T0014735.1 MGP_CBAJ_G0012847.1 mouse_genomes_project 5 43071752 43072221 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001570.1 MGP_CBAJ_G0001490.1 mouse_genomes_project 5 61364851 61366798 + TEC TEC MGP_CBAJ_T0017910.1 MGP_CBAJ_G0015347.1 mouse_genomes_project 5 82173158 82183807 + 4930432L08Rik processed_transcript processed_transcript MGP_CBAJ_T0072275.1 MGP_CBAJ_G0029421.1 mouse_genomes_project 5 100742039 100818043 - MGP_CBAJ_P0072275 Scarb2 protein_coding protein_coding MGP_CBAJ_T0072276.1 MGP_CBAJ_G0029421.1 mouse_genomes_project 5 100789778 100791811 - Scarb2 protein_coding retained_intron MGP_CBAJ_T0070579.1 MGP_CBAJ_G0029103.1 mouse_genomes_project 5 33384092 33393024 - MGP_CBAJ_P0070579 protein_coding protein_coding MGP_CBAJ_T0072483.1 MGP_CBAJ_G0029464.1 mouse_genomes_project 5 111239308 111246166 - MGP_CBAJ_P0072483 Nkx6-1 protein_coding protein_coding MGP_CBAJ_T0071170.1 MGP_CBAJ_G0029201.1 mouse_genomes_project 5 47509548 47524584 + MGP_CBAJ_P0071170 Clrn2 protein_coding protein_coding MGP_CBAJ_T0001826.1 MGP_CBAJ_G0001743.1 mouse_genomes_project 5 147186229 147187559 - TEC TEC MGP_CBAJ_T0017908.1 MGP_CBAJ_G0015346.1 mouse_genomes_project 5 79707331 79708591 + Dancr processed_transcript lincRNA MGP_CBAJ_T0017909.1 MGP_CBAJ_G0015346.1 mouse_genomes_project 5 79707337 79708590 + Dancr processed_transcript retained_intron MGP_CBAJ_T0073349.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128070568 128155461 + Cit protein_coding retained_intron MGP_CBAJ_T0073350.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128070570 128099041 + MGP_CBAJ_P0073350 Cit protein_coding protein_coding MGP_CBAJ_T0073351.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128070571 128099059 + MGP_CBAJ_P0073351 Cit protein_coding protein_coding MGP_CBAJ_T0073352.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128070934 128155468 + Cit protein_coding retained_intron MGP_CBAJ_T0073353.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128070934 128249484 + MGP_CBAJ_P0073353 Cit protein_coding protein_coding MGP_CBAJ_T0073354.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128070934 128246891 + MGP_CBAJ_P0073354 Cit protein_coding protein_coding MGP_CBAJ_T0073355.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128071661 128246866 + MGP_CBAJ_P0073355 Cit protein_coding protein_coding MGP_CBAJ_T0073356.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128071661 128246866 + MGP_CBAJ_P0073356 Cit protein_coding protein_coding MGP_CBAJ_T0073357.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128071751 128079969 + Cit protein_coding processed_transcript MGP_CBAJ_T0073358.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128076268 128088222 + Cit protein_coding retained_intron MGP_CBAJ_T0073359.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128111471 128112655 + Cit protein_coding retained_intron MGP_CBAJ_T0073360.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128132262 128155359 + Cit protein_coding retained_intron MGP_CBAJ_T0073361.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128132291 128249464 + MGP_CBAJ_P0073361 Cit protein_coding unknown_likely_coding MGP_CBAJ_T0073362.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128155399 128247309 + Cit protein_coding processed_transcript MGP_CBAJ_T0073363.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128155844 128246906 + Cit protein_coding processed_transcript MGP_CBAJ_T0073364.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128163399 128176687 + Cit protein_coding processed_transcript MGP_CBAJ_T0073365.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128175051 128236333 + Cit protein_coding retained_intron MGP_CBAJ_T0073366.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128180816 128182376 + Cit protein_coding processed_transcript MGP_CBAJ_T0073367.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128200398 128246903 + MGP_CBAJ_P0073367 Cit protein_coding nonsense_mediated_decay MGP_CBAJ_T0073368.1 MGP_CBAJ_G0029640.1 mouse_genomes_project 5 128219554 128223177 + Cit protein_coding retained_intron MGP_CBAJ_T0008244.1 MGP_CBAJ_G0006693.1 mouse_genomes_project 5 133316357 133322852 - Gm42654 lincRNA lincRNA MGP_CBAJ_T0008245.1 MGP_CBAJ_G0006693.1 mouse_genomes_project 5 133316365 133319443 - Gm42654 lincRNA lincRNA MGP_CBAJ_T0070804.1 MGP_CBAJ_G0029136.1 mouse_genomes_project 5 35563320 35587931 - MGP_CBAJ_P0070804 Nop14 protein_coding protein_coding MGP_CBAJ_T0070805.1 MGP_CBAJ_G0029136.1 mouse_genomes_project 5 35566113 35571469 - MGP_CBAJ_P0070805 Nop14 protein_coding protein_coding MGP_CBAJ_T0070806.1 MGP_CBAJ_G0029136.1 mouse_genomes_project 5 35568290 35572724 - Nop14 protein_coding retained_intron MGP_CBAJ_T0008042.1 MGP_CBAJ_G0006549.1 mouse_genomes_project 5 68767303 68773037 + lincRNA lincRNA MGP_CBAJ_T0014669.1 MGP_CBAJ_G0012781.1 mouse_genomes_project 5 20902120 20902760 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0070199.1 MGP_CBAJ_G0029044.1 mouse_genomes_project 5 29903644 29903944 - MGP_CBAJ_P0070199 Gm5129 protein_coding protein_coding MGP_CBAJ_T0071301.1 MGP_CBAJ_G0029222.1 mouse_genomes_project 5 56137585 56139094 + Smim20 protein_coding retained_intron MGP_CBAJ_T0071302.1 MGP_CBAJ_G0029222.1 mouse_genomes_project 5 56137640 56149047 + MGP_CBAJ_P0071302 Smim20 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071303.1 MGP_CBAJ_G0029222.1 mouse_genomes_project 5 56137640 56149047 + MGP_CBAJ_P0071303 Smim20 protein_coding protein_coding MGP_CBAJ_T0071304.1 MGP_CBAJ_G0029222.1 mouse_genomes_project 5 56137679 56149047 + MGP_CBAJ_P0071304 Smim20 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071305.1 MGP_CBAJ_G0029222.1 mouse_genomes_project 5 56137692 56139768 + Smim20 protein_coding retained_intron MGP_CBAJ_T0071306.1 MGP_CBAJ_G0029222.1 mouse_genomes_project 5 56147624 56148533 + Smim20 protein_coding retained_intron MGP_CBAJ_T0073848.1 MGP_CBAJ_G0029730.1 mouse_genomes_project 5 136924505 136939134 - MGP_CBAJ_P0073848 Hpd protein_coding protein_coding MGP_CBAJ_T0073849.1 MGP_CBAJ_G0029730.1 mouse_genomes_project 5 136924570 136925623 - Hpd protein_coding processed_transcript MGP_CBAJ_T0073850.1 MGP_CBAJ_G0029730.1 mouse_genomes_project 5 136924799 136928625 - MGP_CBAJ_P0073850 Hpd protein_coding protein_coding MGP_CBAJ_T0073851.1 MGP_CBAJ_G0029730.1 mouse_genomes_project 5 136930238 136939129 - Hpd protein_coding retained_intron MGP_CBAJ_T0073852.1 MGP_CBAJ_G0029730.1 mouse_genomes_project 5 136930238 136939130 - MGP_CBAJ_P0073852 Hpd protein_coding protein_coding MGP_CBAJ_T0073853.1 MGP_CBAJ_G0029730.1 mouse_genomes_project 5 136937065 136938474 - Hpd protein_coding processed_transcript MGP_CBAJ_T0075595.1 MGP_CBAJ_G0030072.1 mouse_genomes_project 5 167057965 167176043 - MGP_CBAJ_P0075595 Gm42791 protein_coding protein_coding MGP_CBAJ_T0075598.1 MGP_CBAJ_G0030072.1 mouse_genomes_project 5 167161333 167161989 - Gm42791 protein_coding processed_transcript MGP_CBAJ_T0008340.1 MGP_CBAJ_G0006757.1 mouse_genomes_project 5 165714800 165718466 + Gm43156 lincRNA lincRNA MGP_CBAJ_T0100621.1 MGP_CBAJ_G0038876.1 mouse_genomes_project 5 90658164 90658292 - Gm24792 snoRNA snoRNA MGP_CBAJ_T0074535.1 MGP_CBAJ_G0029846.1 mouse_genomes_project 5 150816479 150841720 - MGP_CBAJ_P0074535 Pom121 protein_coding protein_coding MGP_CBAJ_T0001647.1 MGP_CBAJ_G0001565.1 mouse_genomes_project 5 78481776 78487886 - TEC TEC MGP_CBAJ_T0098426.1 MGP_CBAJ_G0036691.1 mouse_genomes_project 5 161449051 161458350 + sense_intronic sense_intronic MGP_CBAJ_T0098427.1 MGP_CBAJ_G0036691.1 mouse_genomes_project 5 161453701 161458316 + sense_intronic sense_intronic MGP_CBAJ_T0014798.1 MGP_CBAJ_G0012910.1 mouse_genomes_project 5 75004950 75005234 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008108.1 MGP_CBAJ_G0006603.1 mouse_genomes_project 5 106329866 106351724 + Gm33969 lincRNA lincRNA MGP_CBAJ_T0070437.1 MGP_CBAJ_G0029083.1 mouse_genomes_project 5 31563070 31567821 - MGP_CBAJ_P0070437 Zfp513 protein_coding protein_coding MGP_CBAJ_T0070438.1 MGP_CBAJ_G0029083.1 mouse_genomes_project 5 31563072 31567560 - MGP_CBAJ_P0070438 Zfp513 protein_coding protein_coding MGP_CBAJ_T0070439.1 MGP_CBAJ_G0029083.1 mouse_genomes_project 5 31563589 31566279 - Zfp513 protein_coding processed_transcript MGP_CBAJ_T0070440.1 MGP_CBAJ_G0029083.1 mouse_genomes_project 5 31563870 31564376 - MGP_CBAJ_P0070440 Zfp513 protein_coding protein_coding MGP_CBAJ_T0070441.1 MGP_CBAJ_G0029083.1 mouse_genomes_project 5 31564687 31565569 - Zfp513 protein_coding processed_transcript MGP_CBAJ_T0070442.1 MGP_CBAJ_G0029083.1 mouse_genomes_project 5 31564795 31565569 - Zfp513 protein_coding processed_transcript MGP_CBAJ_T0070443.1 MGP_CBAJ_G0029083.1 mouse_genomes_project 5 31566186 31567733 - MGP_CBAJ_P0070443 Zfp513 protein_coding protein_coding MGP_CBAJ_T0070444.1 MGP_CBAJ_G0029083.1 mouse_genomes_project 5 31566273 31567743 - MGP_CBAJ_P0070444 Zfp513 protein_coding protein_coding MGP_CBAJ_T0074234.1 MGP_CBAJ_G0029795.1 mouse_genomes_project 5 144428170 144443636 - MGP_CBAJ_P0074234 Psph protein_coding protein_coding MGP_CBAJ_T0074235.1 MGP_CBAJ_G0029795.1 mouse_genomes_project 5 144428170 144451930 - MGP_CBAJ_P0074235 Psph protein_coding protein_coding MGP_CBAJ_T0074236.1 MGP_CBAJ_G0029795.1 mouse_genomes_project 5 144435664 144451635 - MGP_CBAJ_P0074236 Psph protein_coding protein_coding MGP_CBAJ_T0074237.1 MGP_CBAJ_G0029795.1 mouse_genomes_project 5 144436384 144443669 - Psph protein_coding retained_intron MGP_CBAJ_T0074238.1 MGP_CBAJ_G0029795.1 mouse_genomes_project 5 144441328 144451733 - Psph protein_coding retained_intron MGP_CBAJ_T0074239.1 MGP_CBAJ_G0029795.1 mouse_genomes_project 5 144443843 144451688 - Psph protein_coding processed_transcript MGP_CBAJ_T0072961.1 MGP_CBAJ_G0029565.1 mouse_genomes_project 5 123790927 123804633 + MGP_CBAJ_P0072961 Crybb1 protein_coding protein_coding MGP_CBAJ_T0072962.1 MGP_CBAJ_G0029565.1 mouse_genomes_project 5 123790957 123804505 + MGP_CBAJ_P0072962 Crybb1 protein_coding protein_coding MGP_CBAJ_T0072963.1 MGP_CBAJ_G0029565.1 mouse_genomes_project 5 123790986 123804550 + MGP_CBAJ_P0072963 Crybb1 protein_coding protein_coding MGP_CBAJ_T0099410.1 MGP_CBAJ_G0037665.1 mouse_genomes_project 5 169211834 169211940 + Gm24630 snRNA snRNA MGP_CBAJ_T0001867.1 MGP_CBAJ_G0001783.1 mouse_genomes_project 5 166656641 166657286 - TEC TEC MGP_CBAJ_T0072176.1 MGP_CBAJ_G0029399.1 mouse_genomes_project 5 98829480 98838358 + MGP_CBAJ_P0072176 Cxcl15 protein_coding protein_coding MGP_CBAJ_T0011484.1 MGP_CBAJ_G0009622.1 mouse_genomes_project 5 138248672 138248935 + Gm23171 misc_RNA misc_RNA MGP_CBAJ_T0014771.1 MGP_CBAJ_G0012883.1 mouse_genomes_project 5 63557027 63557439 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010561.1 MGP_CBAJ_G0008699.1 mouse_genomes_project 5 70615287 70615361 + Gm25952 miRNA miRNA MGP_CBAJ_T0001708.1 MGP_CBAJ_G0001626.1 mouse_genomes_project 5 116891963 116894872 - TEC TEC MGP_CBAJ_T0001639.1 MGP_CBAJ_G0001558.1 mouse_genomes_project 5 74314812 74319572 - TEC TEC MGP_CBAJ_T0074215.1 MGP_CBAJ_G0029792.1 mouse_genomes_project 5 144317161 144326991 - Sept14 protein_coding processed_transcript MGP_CBAJ_T0074216.1 MGP_CBAJ_G0029792.1 mouse_genomes_project 5 144317172 144347647 - MGP_CBAJ_P0074216 Sept14 protein_coding protein_coding MGP_CBAJ_T0074217.1 MGP_CBAJ_G0029792.1 mouse_genomes_project 5 144317209 144350043 - MGP_CBAJ_P0074217 Sept14 protein_coding protein_coding MGP_CBAJ_T0072712.1 MGP_CBAJ_G0029515.1 mouse_genomes_project 5 118505656 118555634 + Mtf2 protein_coding processed_transcript MGP_CBAJ_T0072713.1 MGP_CBAJ_G0029515.1 mouse_genomes_project 5 118505693 118555929 + MGP_CBAJ_P0072713 Mtf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072714.1 MGP_CBAJ_G0029515.1 mouse_genomes_project 5 118505698 118556095 + Mtf2 protein_coding processed_transcript MGP_CBAJ_T0072715.1 MGP_CBAJ_G0029515.1 mouse_genomes_project 5 118505698 118556740 + Mtf2 protein_coding processed_transcript MGP_CBAJ_T0072716.1 MGP_CBAJ_G0029515.1 mouse_genomes_project 5 118505699 118509568 + Mtf2 protein_coding retained_intron MGP_CBAJ_T0072717.1 MGP_CBAJ_G0029515.1 mouse_genomes_project 5 118505711 118528907 + MGP_CBAJ_P0072717 Mtf2 protein_coding protein_coding MGP_CBAJ_T0072718.1 MGP_CBAJ_G0029515.1 mouse_genomes_project 5 118505724 118555473 + MGP_CBAJ_P0072718 Mtf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072719.1 MGP_CBAJ_G0029515.1 mouse_genomes_project 5 118505724 118556741 + MGP_CBAJ_P0072719 Mtf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072720.1 MGP_CBAJ_G0029515.1 mouse_genomes_project 5 118505724 118557475 + MGP_CBAJ_P0072720 Mtf2 protein_coding protein_coding MGP_CBAJ_T0072721.1 MGP_CBAJ_G0029515.1 mouse_genomes_project 5 118505726 118555556 + MGP_CBAJ_P0072721 Mtf2 protein_coding protein_coding MGP_CBAJ_T0072722.1 MGP_CBAJ_G0029515.1 mouse_genomes_project 5 118505726 118540045 + MGP_CBAJ_P0072722 Mtf2 protein_coding protein_coding MGP_CBAJ_T0072723.1 MGP_CBAJ_G0029515.1 mouse_genomes_project 5 118505739 118533892 + Mtf2 protein_coding processed_transcript MGP_CBAJ_T0072724.1 MGP_CBAJ_G0029515.1 mouse_genomes_project 5 118514469 118522717 + Mtf2 protein_coding processed_transcript MGP_CBAJ_T0072725.1 MGP_CBAJ_G0029515.1 mouse_genomes_project 5 118519701 118555941 + Mtf2 protein_coding processed_transcript MGP_CBAJ_T0072726.1 MGP_CBAJ_G0029515.1 mouse_genomes_project 5 118528534 118549041 + MGP_CBAJ_P0072726 Mtf2 protein_coding protein_coding MGP_CBAJ_T0072727.1 MGP_CBAJ_G0029515.1 mouse_genomes_project 5 118537981 118552259 + MGP_CBAJ_P0072727 Mtf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072071.1 MGP_CBAJ_G0029364.1 mouse_genomes_project 5 95527126 95530538 + MGP_CBAJ_P0072071 2310003L06Rik protein_coding protein_coding MGP_CBAJ_T0070389.1 MGP_CBAJ_G0029078.1 mouse_genomes_project 5 31495041 31513859 - MGP_CBAJ_P0070389 Mpv17 protein_coding protein_coding MGP_CBAJ_T0070390.1 MGP_CBAJ_G0029078.1 mouse_genomes_project 5 31495050 31513830 - MGP_CBAJ_P0070390 Mpv17 protein_coding protein_coding MGP_CBAJ_T0070391.1 MGP_CBAJ_G0029078.1 mouse_genomes_project 5 31495483 31513806 - MGP_CBAJ_P0070391 Mpv17 protein_coding protein_coding MGP_CBAJ_T0070392.1 MGP_CBAJ_G0029078.1 mouse_genomes_project 5 31495845 31513836 - MGP_CBAJ_P0070392 Mpv17 protein_coding protein_coding MGP_CBAJ_T0070393.1 MGP_CBAJ_G0029078.1 mouse_genomes_project 5 31495903 31513760 - MGP_CBAJ_P0070393 Mpv17 protein_coding protein_coding MGP_CBAJ_T0070394.1 MGP_CBAJ_G0029078.1 mouse_genomes_project 5 31495928 31513800 - MGP_CBAJ_P0070394 Mpv17 protein_coding protein_coding MGP_CBAJ_T0070395.1 MGP_CBAJ_G0029078.1 mouse_genomes_project 5 31495996 31505879 - MGP_CBAJ_P0070395 Mpv17 protein_coding protein_coding MGP_CBAJ_T0070396.1 MGP_CBAJ_G0029078.1 mouse_genomes_project 5 31496098 31505899 - Mpv17 protein_coding retained_intron MGP_CBAJ_T0070397.1 MGP_CBAJ_G0029078.1 mouse_genomes_project 5 31503912 31513826 - Mpv17 protein_coding retained_intron MGP_CBAJ_T0070398.1 MGP_CBAJ_G0029078.1 mouse_genomes_project 5 31504112 31513829 - MGP_CBAJ_P0070398 Mpv17 protein_coding protein_coding MGP_CBAJ_T0070400.1 MGP_CBAJ_G0029078.1 mouse_genomes_project 5 31504878 31513826 - Mpv17 protein_coding retained_intron MGP_CBAJ_T0070401.1 MGP_CBAJ_G0029078.1 mouse_genomes_project 5 31505114 31513350 - Mpv17 protein_coding retained_intron MGP_CBAJ_T0008302.1 MGP_CBAJ_G0006725.1 mouse_genomes_project 5 147555351 147559902 + Gm42626 lincRNA lincRNA MGP_CBAJ_T0011487.1 MGP_CBAJ_G0009625.1 mouse_genomes_project 5 155760794 155761071 + Gm27316 misc_RNA misc_RNA MGP_CBAJ_T0001792.1 MGP_CBAJ_G0001709.1 mouse_genomes_project 5 140681159 140682124 + TEC TEC MGP_CBAJ_T0098398.1 MGP_CBAJ_G0036664.1 mouse_genomes_project 5 2050770 2052689 - Gm43111 sense_intronic sense_intronic MGP_CBAJ_T0010563.1 MGP_CBAJ_G0008701.1 mouse_genomes_project 5 74389306 74389412 + Gm24368 miRNA miRNA MGP_CBAJ_T0004694.1 MGP_CBAJ_G0004050.1 mouse_genomes_project 5 123929172 123932441 - Gm20636 antisense antisense MGP_CBAJ_T0075463.1 MGP_CBAJ_G0030040.1 mouse_genomes_project 5 163785374 163787650 - MGP_CBAJ_P0075463 Gm3409 protein_coding protein_coding MGP_CBAJ_T0075464.1 MGP_CBAJ_G0030040.1 mouse_genomes_project 5 163785374 163787650 - MGP_CBAJ_P0075464 Gm3409 protein_coding protein_coding MGP_CBAJ_T0014804.1 MGP_CBAJ_G0012916.1 mouse_genomes_project 5 78436651 78436910 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0073531.1 MGP_CBAJ_G0029676.1 mouse_genomes_project 5 133795429 133814784 - MGP_CBAJ_P0073531 Oas2 protein_coding protein_coding MGP_CBAJ_T0073532.1 MGP_CBAJ_G0029676.1 mouse_genomes_project 5 133795430 133814784 - MGP_CBAJ_P0073532 Oas2 protein_coding protein_coding MGP_CBAJ_T0073533.1 MGP_CBAJ_G0029676.1 mouse_genomes_project 5 133795432 133800674 - Oas2 protein_coding retained_intron MGP_CBAJ_T0073534.1 MGP_CBAJ_G0029676.1 mouse_genomes_project 5 133798382 133803496 - MGP_CBAJ_P0073534 Oas2 protein_coding protein_coding MGP_CBAJ_T0070354.1 MGP_CBAJ_G0029072.1 mouse_genomes_project 5 31378812 31386781 + MGP_CBAJ_P0070354 Atraid protein_coding protein_coding MGP_CBAJ_T0070355.1 MGP_CBAJ_G0029072.1 mouse_genomes_project 5 31378821 31391794 + Atraid protein_coding retained_intron MGP_CBAJ_T0070356.1 MGP_CBAJ_G0029072.1 mouse_genomes_project 5 31379135 31391800 + MGP_CBAJ_P0070356 Atraid protein_coding protein_coding MGP_CBAJ_T0070357.1 MGP_CBAJ_G0029072.1 mouse_genomes_project 5 31379148 31391170 + MGP_CBAJ_P0070357 Atraid protein_coding protein_coding MGP_CBAJ_T0070358.1 MGP_CBAJ_G0029072.1 mouse_genomes_project 5 31379151 31391798 + MGP_CBAJ_P0070358 Atraid protein_coding protein_coding MGP_CBAJ_T0070359.1 MGP_CBAJ_G0029072.1 mouse_genomes_project 5 31379159 31391795 + MGP_CBAJ_P0070359 Atraid protein_coding nonsense_mediated_decay MGP_CBAJ_T0070360.1 MGP_CBAJ_G0029072.1 mouse_genomes_project 5 31379222 31391521 + MGP_CBAJ_P0070360 Atraid protein_coding protein_coding MGP_CBAJ_T0070361.1 MGP_CBAJ_G0029072.1 mouse_genomes_project 5 31391046 31391800 + Atraid protein_coding processed_transcript MGP_CBAJ_T0001680.1 MGP_CBAJ_G0001598.1 mouse_genomes_project 5 101554507 101556597 + TEC TEC MGP_CBAJ_T0074990.1 MGP_CBAJ_G0029936.1 mouse_genomes_project 5 154901943 154904411 - MGP_CBAJ_P0074990 1700123K08Rik protein_coding protein_coding MGP_CBAJ_T0072821.1 MGP_CBAJ_G0029541.1 mouse_genomes_project 5 121382374 121383732 - Gtpbp6 protein_coding retained_intron MGP_CBAJ_T0072822.1 MGP_CBAJ_G0029541.1 mouse_genomes_project 5 121382375 121385588 - Gtpbp6 protein_coding retained_intron MGP_CBAJ_T0072823.1 MGP_CBAJ_G0029541.1 mouse_genomes_project 5 121382376 121386559 - MGP_CBAJ_P0072823 Gtpbp6 protein_coding protein_coding MGP_CBAJ_T0072824.1 MGP_CBAJ_G0029541.1 mouse_genomes_project 5 121383304 121385562 - Gtpbp6 protein_coding processed_transcript MGP_CBAJ_T0072825.1 MGP_CBAJ_G0029541.1 mouse_genomes_project 5 121383628 121385802 - MGP_CBAJ_P0072825 Gtpbp6 protein_coding protein_coding MGP_CBAJ_T0072826.1 MGP_CBAJ_G0029541.1 mouse_genomes_project 5 121384187 121385310 - Gtpbp6 protein_coding retained_intron MGP_CBAJ_T0072827.1 MGP_CBAJ_G0029541.1 mouse_genomes_project 5 121385034 121386528 - Gtpbp6 protein_coding processed_transcript MGP_CBAJ_T0072828.1 MGP_CBAJ_G0029541.1 mouse_genomes_project 5 121385086 121385995 - Gtpbp6 protein_coding retained_intron MGP_CBAJ_T0072829.1 MGP_CBAJ_G0029541.1 mouse_genomes_project 5 121385233 121385818 - Gtpbp6 protein_coding retained_intron MGP_CBAJ_T0072830.1 MGP_CBAJ_G0029541.1 mouse_genomes_project 5 121385421 121386099 - Gtpbp6 protein_coding retained_intron MGP_CBAJ_T0072831.1 MGP_CBAJ_G0029541.1 mouse_genomes_project 5 121385434 121386549 - Gtpbp6 protein_coding retained_intron MGP_CBAJ_T0001654.1 MGP_CBAJ_G0001572.1 mouse_genomes_project 5 79661566 79662313 + TEC TEC MGP_CBAJ_T0070059.1 MGP_CBAJ_G0029010.1 mouse_genomes_project 5 24063109 24116999 + MGP_CBAJ_P0070059 Agap3 protein_coding protein_coding MGP_CBAJ_T0070060.1 MGP_CBAJ_G0029010.1 mouse_genomes_project 5 24063139 24098119 + MGP_CBAJ_P0070060 Agap3 protein_coding unknown_likely_coding MGP_CBAJ_T0070061.1 MGP_CBAJ_G0029010.1 mouse_genomes_project 5 24063266 24097255 + Agap3 protein_coding processed_transcript MGP_CBAJ_T0070062.1 MGP_CBAJ_G0029010.1 mouse_genomes_project 5 24089240 24098111 + MGP_CBAJ_P0070062 Agap3 protein_coding protein_coding MGP_CBAJ_T0070063.1 MGP_CBAJ_G0029010.1 mouse_genomes_project 5 24094779 24116989 + MGP_CBAJ_P0070063 Agap3 protein_coding protein_coding MGP_CBAJ_T0070064.1 MGP_CBAJ_G0029010.1 mouse_genomes_project 5 24095198 24098109 + Agap3 protein_coding processed_transcript MGP_CBAJ_T0017869.1 MGP_CBAJ_G0015334.1 mouse_genomes_project 5 31260032 31263379 + Abhd1 processed_transcript processed_transcript MGP_CBAJ_T0017870.1 MGP_CBAJ_G0015334.1 mouse_genomes_project 5 31260032 31265067 + Abhd1 processed_transcript processed_transcript MGP_CBAJ_T0017871.1 MGP_CBAJ_G0015334.1 mouse_genomes_project 5 31260055 31265065 + Abhd1 processed_transcript retained_intron MGP_CBAJ_T0017872.1 MGP_CBAJ_G0015334.1 mouse_genomes_project 5 31260055 31263689 + Abhd1 processed_transcript processed_transcript MGP_CBAJ_T0017873.1 MGP_CBAJ_G0015334.1 mouse_genomes_project 5 31260058 31264675 + Abhd1 processed_transcript processed_transcript MGP_CBAJ_T0017874.1 MGP_CBAJ_G0015334.1 mouse_genomes_project 5 31260072 31265065 + Abhd1 processed_transcript processed_transcript MGP_CBAJ_T0017875.1 MGP_CBAJ_G0015334.1 mouse_genomes_project 5 31263349 31264160 + Abhd1 processed_transcript retained_intron MGP_CBAJ_T0004627.1 MGP_CBAJ_G0004002.1 mouse_genomes_project 5 72682175 72748262 + Gm15477 antisense antisense MGP_CBAJ_T0004628.1 MGP_CBAJ_G0004002.1 mouse_genomes_project 5 72682245 72743722 + Gm15477 antisense antisense MGP_CBAJ_T0071978.1 MGP_CBAJ_G0029336.1 mouse_genomes_project 5 93566527 93627035 - MGP_CBAJ_P0071978 Tmprss11c protein_coding protein_coding MGP_CBAJ_T0071979.1 MGP_CBAJ_G0029336.1 mouse_genomes_project 5 93566798 93626987 - MGP_CBAJ_P0071979 Tmprss11c protein_coding protein_coding MGP_CBAJ_T0099336.1 MGP_CBAJ_G0037591.1 mouse_genomes_project 5 23340036 23340191 - Gm22054 snRNA snRNA MGP_CBAJ_T0017864.1 MGP_CBAJ_G0015332.1 mouse_genomes_project 5 24824573 24826497 + 2900005J15Rik processed_transcript processed_transcript MGP_CBAJ_T0017865.1 MGP_CBAJ_G0015332.1 mouse_genomes_project 5 24825048 24836426 + 2900005J15Rik processed_transcript processed_transcript MGP_CBAJ_T0074814.1 MGP_CBAJ_G0029897.1 mouse_genomes_project 5 153503114 153509766 - MGP_CBAJ_P0074814 Mospd3 protein_coding protein_coding MGP_CBAJ_T0074815.1 MGP_CBAJ_G0029897.1 mouse_genomes_project 5 153503116 153510102 - MGP_CBAJ_P0074815 Mospd3 protein_coding protein_coding MGP_CBAJ_T0074816.1 MGP_CBAJ_G0029897.1 mouse_genomes_project 5 153503688 153509858 - Mospd3 protein_coding processed_transcript MGP_CBAJ_T0074817.1 MGP_CBAJ_G0029897.1 mouse_genomes_project 5 153503740 153510116 - MGP_CBAJ_P0074817 Mospd3 protein_coding protein_coding MGP_CBAJ_T0074818.1 MGP_CBAJ_G0029897.1 mouse_genomes_project 5 153509091 153509782 - MGP_CBAJ_P0074818 Mospd3 protein_coding protein_coding MGP_CBAJ_T0074819.1 MGP_CBAJ_G0029897.1 mouse_genomes_project 5 153509140 153509749 - Mospd3 protein_coding retained_intron MGP_CBAJ_T0070943.1 MGP_CBAJ_G0029159.1 mouse_genomes_project 5 37744834 37793255 - MGP_CBAJ_P0070943 D5Ertd579e protein_coding protein_coding MGP_CBAJ_T0070944.1 MGP_CBAJ_G0029159.1 mouse_genomes_project 5 37746611 37758082 - MGP_CBAJ_P0070944 D5Ertd579e protein_coding protein_coding MGP_CBAJ_T0070945.1 MGP_CBAJ_G0029159.1 mouse_genomes_project 5 37760307 37765608 - D5Ertd579e protein_coding processed_transcript MGP_CBAJ_T0070946.1 MGP_CBAJ_G0029159.1 mouse_genomes_project 5 37762217 37819904 - D5Ertd579e protein_coding retained_intron MGP_CBAJ_T0070947.1 MGP_CBAJ_G0029159.1 mouse_genomes_project 5 37771416 37819880 - D5Ertd579e protein_coding retained_intron MGP_CBAJ_T0070948.1 MGP_CBAJ_G0029159.1 mouse_genomes_project 5 37787943 37819967 - MGP_CBAJ_P0070948 D5Ertd579e protein_coding protein_coding MGP_CBAJ_T0070949.1 MGP_CBAJ_G0029159.1 mouse_genomes_project 5 37810045 37819913 - D5Ertd579e protein_coding retained_intron MGP_CBAJ_T0014694.1 MGP_CBAJ_G0012806.1 mouse_genomes_project 5 25524521 25524882 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0073244.1 MGP_CBAJ_G0029621.1 mouse_genomes_project 5 127199389 127212583 - MGP_CBAJ_P0073244 Unc119b protein_coding protein_coding MGP_CBAJ_T0073245.1 MGP_CBAJ_G0029621.1 mouse_genomes_project 5 127202575 127205121 - Unc119b protein_coding retained_intron MGP_CBAJ_T0073246.1 MGP_CBAJ_G0029621.1 mouse_genomes_project 5 127207230 127212533 - Unc119b protein_coding retained_intron MGP_CBAJ_T0101934.1 MGP_CBAJ_G0039965.1 mouse_genomes_project 5 90823443 90824032 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0071578.1 MGP_CBAJ_G0029265.1 mouse_genomes_project 5 72422399 72428530 + MGP_CBAJ_P0071578 Shisa3 protein_coding protein_coding MGP_CBAJ_T0071579.1 MGP_CBAJ_G0029265.1 mouse_genomes_project 5 72422486 72438052 + MGP_CBAJ_P0071579 Shisa3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070080.1 MGP_CBAJ_G0029016.1 mouse_genomes_project 5 24224696 24235834 - Smarcd3 protein_coding retained_intron MGP_CBAJ_T0070081.1 MGP_CBAJ_G0029016.1 mouse_genomes_project 5 24226501 24259752 - MGP_CBAJ_P0070081 Smarcd3 protein_coding protein_coding MGP_CBAJ_T0070082.1 MGP_CBAJ_G0029016.1 mouse_genomes_project 5 24226501 24235870 - MGP_CBAJ_P0070082 Smarcd3 protein_coding protein_coding MGP_CBAJ_T0070084.1 MGP_CBAJ_G0029016.1 mouse_genomes_project 5 24228574 24230729 - Smarcd3 protein_coding retained_intron MGP_CBAJ_T0070085.1 MGP_CBAJ_G0029016.1 mouse_genomes_project 5 24229043 24235793 - Smarcd3 protein_coding retained_intron MGP_CBAJ_T0070086.1 MGP_CBAJ_G0029016.1 mouse_genomes_project 5 24229614 24232822 - Smarcd3 protein_coding retained_intron MGP_CBAJ_T0070087.1 MGP_CBAJ_G0029016.1 mouse_genomes_project 5 24229625 24230869 - Smarcd3 protein_coding retained_intron MGP_CBAJ_T0070088.1 MGP_CBAJ_G0029016.1 mouse_genomes_project 5 24229746 24235758 - Smarcd3 protein_coding retained_intron MGP_CBAJ_T0070089.1 MGP_CBAJ_G0029016.1 mouse_genomes_project 5 24257887 24258498 - Smarcd3 protein_coding processed_transcript MGP_CBAJ_T0071973.1 MGP_CBAJ_G0029334.1 mouse_genomes_project 5 93420987 93499233 - MGP_CBAJ_P0071973 Uba6 protein_coding protein_coding MGP_CBAJ_T0071974.1 MGP_CBAJ_G0029334.1 mouse_genomes_project 5 93433422 93499234 - Uba6 protein_coding retained_intron MGP_CBAJ_T0001400.1 MGP_CBAJ_G0001324.1 mouse_genomes_project 5 4811753 4813298 - TEC TEC MGP_CBAJ_T0007987.1 MGP_CBAJ_G0006508.1 mouse_genomes_project 5 36369850 36378296 + 4930478P22Rik lincRNA lincRNA MGP_CBAJ_T0007988.1 MGP_CBAJ_G0006508.1 mouse_genomes_project 5 36369862 36378532 + 4930478P22Rik lincRNA lincRNA MGP_CBAJ_T0007989.1 MGP_CBAJ_G0006508.1 mouse_genomes_project 5 36369868 36377758 + 4930478P22Rik lincRNA lincRNA MGP_CBAJ_T0001630.1 MGP_CBAJ_G0001549.1 mouse_genomes_project 5 72678230 72679531 - TEC TEC MGP_CBAJ_T0069618.1 MGP_CBAJ_G0028932.1 mouse_genomes_project 5 1979217 2511346 - MGP_CBAJ_P0069618 Cdk14 protein_coding protein_coding MGP_CBAJ_T0069619.1 MGP_CBAJ_G0028932.1 mouse_genomes_project 5 1979217 2640604 - MGP_CBAJ_P0069619 Cdk14 protein_coding protein_coding MGP_CBAJ_T0069620.1 MGP_CBAJ_G0028932.1 mouse_genomes_project 5 1981656 2510589 - MGP_CBAJ_P0069620 Cdk14 protein_coding protein_coding MGP_CBAJ_T0069621.1 MGP_CBAJ_G0028932.1 mouse_genomes_project 5 1982511 2511443 - MGP_CBAJ_P0069621 Cdk14 protein_coding protein_coding MGP_CBAJ_T0069622.1 MGP_CBAJ_G0028932.1 mouse_genomes_project 5 2069783 2073202 - Cdk14 protein_coding retained_intron MGP_CBAJ_T0069623.1 MGP_CBAJ_G0028932.1 mouse_genomes_project 5 2104736 2511260 - Cdk14 protein_coding retained_intron MGP_CBAJ_T0069624.1 MGP_CBAJ_G0028932.1 mouse_genomes_project 5 2116251 2234026 - Cdk14 protein_coding processed_transcript MGP_CBAJ_T0069625.1 MGP_CBAJ_G0028932.1 mouse_genomes_project 5 2197560 2640631 - Cdk14 protein_coding retained_intron MGP_CBAJ_T0069626.1 MGP_CBAJ_G0028932.1 mouse_genomes_project 5 2318390 2640658 - Cdk14 protein_coding retained_intron MGP_CBAJ_T0069627.1 MGP_CBAJ_G0028932.1 mouse_genomes_project 5 2356965 2640600 - Cdk14 protein_coding retained_intron MGP_CBAJ_T0069628.1 MGP_CBAJ_G0028932.1 mouse_genomes_project 5 2415450 2426242 - Cdk14 protein_coding processed_transcript MGP_CBAJ_T0069629.1 MGP_CBAJ_G0028932.1 mouse_genomes_project 5 2467421 2511570 - MGP_CBAJ_P0069629 Cdk14 protein_coding protein_coding MGP_CBAJ_T0069630.1 MGP_CBAJ_G0028932.1 mouse_genomes_project 5 2467422 2676544 - MGP_CBAJ_P0069630 Cdk14 protein_coding protein_coding MGP_CBAJ_T0069631.1 MGP_CBAJ_G0028932.1 mouse_genomes_project 5 2492246 2511581 - Cdk14 protein_coding processed_transcript MGP_CBAJ_T0014864.1 MGP_CBAJ_G0012976.1 mouse_genomes_project 5 109924197 109924631 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004727.1 MGP_CBAJ_G0004070.1 mouse_genomes_project 5 133067318 133085490 - Gm10390 antisense antisense MGP_CBAJ_T0004728.1 MGP_CBAJ_G0004070.1 mouse_genomes_project 5 133077713 133085492 - Gm10390 antisense antisense MGP_CBAJ_T0072359.1 MGP_CBAJ_G0029439.1 mouse_genomes_project 5 106471291 106473171 - MGP_CBAJ_P0072359 Gk2 protein_coding protein_coding MGP_CBAJ_T0004684.1 MGP_CBAJ_G0004040.1 mouse_genomes_project 5 118002012 118005212 - A930041C12Rik antisense antisense MGP_CBAJ_T0075583.1 MGP_CBAJ_G0030070.1 mouse_genomes_project 5 166602037 166656087 - MGP_CBAJ_P0075583 Ubl3 protein_coding protein_coding MGP_CBAJ_T0075584.1 MGP_CBAJ_G0030070.1 mouse_genomes_project 5 166602531 166656214 - MGP_CBAJ_P0075584 Ubl3 protein_coding protein_coding MGP_CBAJ_T0075585.1 MGP_CBAJ_G0030070.1 mouse_genomes_project 5 166602544 166656214 - MGP_CBAJ_P0075585 Ubl3 protein_coding protein_coding MGP_CBAJ_T0075586.1 MGP_CBAJ_G0030070.1 mouse_genomes_project 5 166603380 166640730 - Ubl3 protein_coding processed_transcript MGP_CBAJ_T0075587.1 MGP_CBAJ_G0030070.1 mouse_genomes_project 5 166606671 166655088 - Ubl3 protein_coding processed_transcript MGP_CBAJ_T0075588.1 MGP_CBAJ_G0030070.1 mouse_genomes_project 5 166606681 166655080 - Ubl3 protein_coding processed_transcript MGP_CBAJ_T0075589.1 MGP_CBAJ_G0030070.1 mouse_genomes_project 5 166650017 166656123 - Ubl3 protein_coding retained_intron MGP_CBAJ_T0072366.1 MGP_CBAJ_G0029443.1 mouse_genomes_project 5 107456208 107991984 + MGP_CBAJ_P0072366 1700007G11Rik protein_coding protein_coding MGP_CBAJ_T0072367.1 MGP_CBAJ_G0029443.1 mouse_genomes_project 5 107456255 107478875 + 1700007G11Rik protein_coding processed_transcript MGP_CBAJ_T0072368.1 MGP_CBAJ_G0029443.1 mouse_genomes_project 5 107456260 107479270 + 1700007G11Rik protein_coding processed_transcript MGP_CBAJ_T0072369.1 MGP_CBAJ_G0029443.1 mouse_genomes_project 5 107456274 107992012 + MGP_CBAJ_P0072369 1700007G11Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0014728.1 MGP_CBAJ_G0012840.1 mouse_genomes_project 5 38498574 38498725 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0070286.1 MGP_CBAJ_G0029061.1 mouse_genomes_project 5 31007233 31100691 + MGP_CBAJ_P0070286 Dpysl5 protein_coding protein_coding MGP_CBAJ_T0070287.1 MGP_CBAJ_G0029061.1 mouse_genomes_project 5 31007251 31103738 + MGP_CBAJ_P0070287 Dpysl5 protein_coding protein_coding MGP_CBAJ_T0070288.1 MGP_CBAJ_G0029061.1 mouse_genomes_project 5 31007258 31043274 + MGP_CBAJ_P0070288 Dpysl5 protein_coding protein_coding MGP_CBAJ_T0070289.1 MGP_CBAJ_G0029061.1 mouse_genomes_project 5 31082603 31091390 + Dpysl5 protein_coding processed_transcript MGP_CBAJ_T0070290.1 MGP_CBAJ_G0029061.1 mouse_genomes_project 5 31092625 31100677 + Dpysl5 protein_coding retained_intron MGP_CBAJ_T0070291.1 MGP_CBAJ_G0029061.1 mouse_genomes_project 5 31096367 31100783 + Dpysl5 protein_coding retained_intron MGP_CBAJ_T0070292.1 MGP_CBAJ_G0029061.1 mouse_genomes_project 5 31098088 31100930 + Dpysl5 protein_coding retained_intron MGP_CBAJ_T0074146.1 MGP_CBAJ_G0029778.1 mouse_genomes_project 5 139669971 139776173 + MGP_CBAJ_P0074146 Tmem132b protein_coding protein_coding MGP_CBAJ_T0074147.1 MGP_CBAJ_G0029778.1 mouse_genomes_project 5 139670583 139952277 + MGP_CBAJ_P0074147 Tmem132b protein_coding protein_coding MGP_CBAJ_T0074148.1 MGP_CBAJ_G0029778.1 mouse_genomes_project 5 139775880 139858998 + Tmem132b protein_coding retained_intron MGP_CBAJ_T0001588.1 MGP_CBAJ_G0001507.1 mouse_genomes_project 5 68862281 68863223 + TEC TEC MGP_CBAJ_T0074832.1 MGP_CBAJ_G0029899.1 mouse_genomes_project 5 153521514 153537860 - MGP_CBAJ_P0074832 Fbxo24 protein_coding protein_coding MGP_CBAJ_T0074833.1 MGP_CBAJ_G0029899.1 mouse_genomes_project 5 153521514 153533961 - MGP_CBAJ_P0074833 Fbxo24 protein_coding protein_coding MGP_CBAJ_T0074834.1 MGP_CBAJ_G0029899.1 mouse_genomes_project 5 153521517 153537814 - MGP_CBAJ_P0074834 Fbxo24 protein_coding nonsense_mediated_decay MGP_CBAJ_T0010598.1 MGP_CBAJ_G0008736.1 mouse_genomes_project 5 151206939 151207023 - Mir7034 miRNA miRNA MGP_CBAJ_T0001731.1 MGP_CBAJ_G0001649.1 mouse_genomes_project 5 125060741 125062039 + TEC TEC MGP_CBAJ_T0001850.1 MGP_CBAJ_G0001766.1 mouse_genomes_project 5 154965120 154966590 + TEC TEC MGP_CBAJ_T0070211.1 MGP_CBAJ_G0029046.1 mouse_genomes_project 5 30234307 30240247 + MGP_CBAJ_P0070211 Il6 protein_coding protein_coding MGP_CBAJ_T0070212.1 MGP_CBAJ_G0029046.1 mouse_genomes_project 5 30234355 30239814 + MGP_CBAJ_P0070212 Il6 protein_coding protein_coding MGP_CBAJ_T0075006.1 MGP_CBAJ_G0029940.1 mouse_genomes_project 5 155189728 155191735 + Gm5294 protein_coding unprocessed_pseudogene MGP_CBAJ_T0075007.1 MGP_CBAJ_G0029940.1 mouse_genomes_project 5 155190438 155191978 + MGP_CBAJ_P0075007 Gm5294 protein_coding protein_coding MGP_CBAJ_T0074655.1 MGP_CBAJ_G0029869.1 mouse_genomes_project 5 151789817 151829467 - MGP_CBAJ_P0074655 Sh2b2 protein_coding protein_coding MGP_CBAJ_T0074656.1 MGP_CBAJ_G0029869.1 mouse_genomes_project 5 151789819 151829516 - MGP_CBAJ_P0074656 Sh2b2 protein_coding protein_coding MGP_CBAJ_T0074657.1 MGP_CBAJ_G0029869.1 mouse_genomes_project 5 151792037 151794333 - Sh2b2 protein_coding retained_intron MGP_CBAJ_T0074658.1 MGP_CBAJ_G0029869.1 mouse_genomes_project 5 151795439 151829450 - MGP_CBAJ_P0074658 Sh2b2 protein_coding protein_coding MGP_CBAJ_T0074659.1 MGP_CBAJ_G0029869.1 mouse_genomes_project 5 151812699 151831185 - MGP_CBAJ_P0074659 Sh2b2 protein_coding protein_coding MGP_CBAJ_T0008199.1 MGP_CBAJ_G0006659.1 mouse_genomes_project 5 124156196 124163259 - 1700034G24Rik lincRNA lincRNA MGP_CBAJ_T0008200.1 MGP_CBAJ_G0006659.1 mouse_genomes_project 5 124156285 124163259 - 1700034G24Rik lincRNA lincRNA MGP_CBAJ_T0014748.1 MGP_CBAJ_G0012860.1 mouse_genomes_project 5 51865987 51866300 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001704.1 MGP_CBAJ_G0001622.1 mouse_genomes_project 5 114308700 114309938 + TEC TEC MGP_CBAJ_T0014847.1 MGP_CBAJ_G0012959.1 mouse_genomes_project 5 98783330 98783644 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014805.1 MGP_CBAJ_G0012917.1 mouse_genomes_project 5 78928685 78929549 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008147.1 MGP_CBAJ_G0006628.1 mouse_genomes_project 5 116536193 116538018 + Gm32921 lincRNA lincRNA MGP_CBAJ_T0075080.1 MGP_CBAJ_G0029953.1 mouse_genomes_project 5 155954830 155971152 - MGP_CBAJ_P0075080 Zfand2a protein_coding protein_coding MGP_CBAJ_T0075081.1 MGP_CBAJ_G0029953.1 mouse_genomes_project 5 155954835 155971120 - MGP_CBAJ_P0075081 Zfand2a protein_coding protein_coding MGP_CBAJ_T0075082.1 MGP_CBAJ_G0029953.1 mouse_genomes_project 5 155958533 155962555 - Zfand2a protein_coding processed_transcript MGP_CBAJ_T0075083.1 MGP_CBAJ_G0029953.1 mouse_genomes_project 5 155962093 155971067 - MGP_CBAJ_P0075083 Zfand2a protein_coding protein_coding MGP_CBAJ_T0075084.1 MGP_CBAJ_G0029953.1 mouse_genomes_project 5 155962688 155971031 - Zfand2a protein_coding processed_transcript MGP_CBAJ_T0008096.1 MGP_CBAJ_G0006591.1 mouse_genomes_project 5 99890785 99898514 - lincRNA lincRNA MGP_CBAJ_T0069868.1 MGP_CBAJ_G0028976.1 mouse_genomes_project 5 20111338 20191992 - MGP_CBAJ_P0069868 Ptpn12 protein_coding protein_coding MGP_CBAJ_T0069869.1 MGP_CBAJ_G0028976.1 mouse_genomes_project 5 20111339 20114150 - Ptpn12 protein_coding retained_intron MGP_CBAJ_T0069870.1 MGP_CBAJ_G0028976.1 mouse_genomes_project 5 20123015 20126148 - Ptpn12 protein_coding retained_intron MGP_CBAJ_T0069871.1 MGP_CBAJ_G0028976.1 mouse_genomes_project 5 20123189 20134338 - Ptpn12 protein_coding retained_intron MGP_CBAJ_T0069872.1 MGP_CBAJ_G0028976.1 mouse_genomes_project 5 20126024 20191834 - MGP_CBAJ_P0069872 Ptpn12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069873.1 MGP_CBAJ_G0028976.1 mouse_genomes_project 5 20130098 20191978 - MGP_CBAJ_P0069873 Ptpn12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069874.1 MGP_CBAJ_G0028976.1 mouse_genomes_project 5 20134175 20191806 - MGP_CBAJ_P0069874 Ptpn12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0008306.1 MGP_CBAJ_G0006729.1 mouse_genomes_project 5 151119390 151137989 - Gm43091 lincRNA lincRNA MGP_CBAJ_T0014750.1 MGP_CBAJ_G0012862.1 mouse_genomes_project 5 52401150 52403447 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0072159.1 MGP_CBAJ_G0029393.1 mouse_genomes_project 5 98562716 98606236 + MGP_CBAJ_P0072159 5830473C10Rik protein_coding protein_coding MGP_CBAJ_T0072160.1 MGP_CBAJ_G0029393.1 mouse_genomes_project 5 98562826 98580210 + MGP_CBAJ_P0072160 5830473C10Rik protein_coding protein_coding MGP_CBAJ_T0008328.1 MGP_CBAJ_G0006747.1 mouse_genomes_project 5 160514758 160518525 - Gm42504 lincRNA lincRNA MGP_CBAJ_T0098062.1 MGP_CBAJ_G0036335.1 mouse_genomes_project 5 129653412 129653533 + n-R5s174 rRNA rRNA MGP_CBAJ_T0072728.1 MGP_CBAJ_G0029516.1 mouse_genomes_project 5 118554837 118584424 - MGP_CBAJ_P0072728 Tmed5 protein_coding protein_coding MGP_CBAJ_T0072729.1 MGP_CBAJ_G0029516.1 mouse_genomes_project 5 118566156 118584442 - MGP_CBAJ_P0072729 Tmed5 protein_coding protein_coding MGP_CBAJ_T0072730.1 MGP_CBAJ_G0029516.1 mouse_genomes_project 5 118569872 118584479 - MGP_CBAJ_P0072730 Tmed5 protein_coding protein_coding MGP_CBAJ_T0072731.1 MGP_CBAJ_G0029516.1 mouse_genomes_project 5 118571300 118584408 - MGP_CBAJ_P0072731 Tmed5 protein_coding protein_coding MGP_CBAJ_T0072732.1 MGP_CBAJ_G0029516.1 mouse_genomes_project 5 118581325 118584392 - MGP_CBAJ_P0072732 Tmed5 protein_coding protein_coding MGP_CBAJ_T0072733.1 MGP_CBAJ_G0029516.1 mouse_genomes_project 5 118581580 118584389 - MGP_CBAJ_P0072733 Tmed5 protein_coding protein_coding MGP_CBAJ_T0072449.1 MGP_CBAJ_G0029458.1 mouse_genomes_project 5 110099405 110118911 - MGP_CBAJ_P0072449 Coq2 protein_coding protein_coding MGP_CBAJ_T0072450.1 MGP_CBAJ_G0029458.1 mouse_genomes_project 5 110099940 110118826 - MGP_CBAJ_P0072450 Coq2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072451.1 MGP_CBAJ_G0029458.1 mouse_genomes_project 5 110102618 110118919 - MGP_CBAJ_P0072451 Coq2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0004568.1 MGP_CBAJ_G0003955.1 mouse_genomes_project 5 28478398 28977996 + antisense antisense MGP_CBAJ_T0004569.1 MGP_CBAJ_G0003955.1 mouse_genomes_project 5 28491916 28741509 + antisense antisense MGP_CBAJ_T0001752.1 MGP_CBAJ_G0001670.1 mouse_genomes_project 5 131323088 131324108 + TEC TEC MGP_CBAJ_T0069539.1 MGP_CBAJ_G0028920.1 mouse_genomes_project 5 511777 538196 + MGP_CBAJ_P0069539 Fam133b protein_coding protein_coding MGP_CBAJ_T0069540.1 MGP_CBAJ_G0028920.1 mouse_genomes_project 5 511780 529026 + Fam133b protein_coding retained_intron MGP_CBAJ_T0069541.1 MGP_CBAJ_G0028920.1 mouse_genomes_project 5 511782 537698 + MGP_CBAJ_P0069541 Fam133b protein_coding nonsense_mediated_decay MGP_CBAJ_T0069542.1 MGP_CBAJ_G0028920.1 mouse_genomes_project 5 511782 537698 + MGP_CBAJ_P0069542 Fam133b protein_coding protein_coding MGP_CBAJ_T0069543.1 MGP_CBAJ_G0028920.1 mouse_genomes_project 5 511788 537771 + Fam133b protein_coding retained_intron MGP_CBAJ_T0069544.1 MGP_CBAJ_G0028920.1 mouse_genomes_project 5 527641 532697 + Fam133b protein_coding retained_intron MGP_CBAJ_T0069545.1 MGP_CBAJ_G0028920.1 mouse_genomes_project 5 533012 533704 + Fam133b protein_coding retained_intron MGP_CBAJ_T0069546.1 MGP_CBAJ_G0028920.1 mouse_genomes_project 5 534815 536989 + Fam133b protein_coding retained_intron MGP_CBAJ_T0004798.1 MGP_CBAJ_G0004122.1 mouse_genomes_project 5 160433280 160436738 + 0610040B10Rik antisense antisense MGP_CBAJ_T0004799.1 MGP_CBAJ_G0004122.1 mouse_genomes_project 5 160433341 160434984 + 0610040B10Rik antisense antisense MGP_CBAJ_T0004800.1 MGP_CBAJ_G0004122.1 mouse_genomes_project 5 160433360 160436735 + 0610040B10Rik antisense antisense MGP_CBAJ_T0073206.1 MGP_CBAJ_G0029613.1 mouse_genomes_project 5 126861341 126864266 - MGP_CBAJ_P0073206 Gm9936 protein_coding protein_coding MGP_CBAJ_T0074951.1 MGP_CBAJ_G0029927.1 mouse_genomes_project 5 154220826 154222134 + MGP_CBAJ_P0074951 Mblac1 protein_coding protein_coding MGP_CBAJ_T0098061.1 MGP_CBAJ_G0036334.1 mouse_genomes_project 5 117750598 117750717 + n-R5s173 rRNA rRNA MGP_CBAJ_T0073771.1 MGP_CBAJ_G0029720.1 mouse_genomes_project 5 136388877 136412866 - MGP_CBAJ_P0073771 Camkk2 protein_coding protein_coding MGP_CBAJ_T0073772.1 MGP_CBAJ_G0029720.1 mouse_genomes_project 5 136389533 136399798 - MGP_CBAJ_P0073772 Camkk2 protein_coding protein_coding MGP_CBAJ_T0073773.1 MGP_CBAJ_G0029720.1 mouse_genomes_project 5 136389780 136446871 - MGP_CBAJ_P0073773 Camkk2 protein_coding protein_coding MGP_CBAJ_T0073774.1 MGP_CBAJ_G0029720.1 mouse_genomes_project 5 136396324 136446954 - Camkk2 protein_coding retained_intron MGP_CBAJ_T0073775.1 MGP_CBAJ_G0029720.1 mouse_genomes_project 5 136402148 136426101 - MGP_CBAJ_P0073775 Camkk2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073776.1 MGP_CBAJ_G0029720.1 mouse_genomes_project 5 136403736 136446890 - Camkk2 protein_coding processed_transcript MGP_CBAJ_T0073777.1 MGP_CBAJ_G0029720.1 mouse_genomes_project 5 136412831 136446836 - MGP_CBAJ_P0073777 Camkk2 protein_coding protein_coding MGP_CBAJ_T0073778.1 MGP_CBAJ_G0029720.1 mouse_genomes_project 5 136415299 136446880 - MGP_CBAJ_P0073778 Camkk2 protein_coding protein_coding MGP_CBAJ_T0073779.1 MGP_CBAJ_G0029720.1 mouse_genomes_project 5 136416566 136446964 - Camkk2 protein_coding retained_intron MGP_CBAJ_T0073780.1 MGP_CBAJ_G0029720.1 mouse_genomes_project 5 136426241 136446870 - MGP_CBAJ_P0073780 Camkk2 protein_coding protein_coding MGP_CBAJ_T0001418.1 MGP_CBAJ_G0001342.1 mouse_genomes_project 5 12581095 12583973 + TEC TEC MGP_CBAJ_T0071696.1 MGP_CBAJ_G0029290.1 mouse_genomes_project 5 78444452 78454751 + MGP_CBAJ_P0071696 Gm5868 protein_coding protein_coding MGP_CBAJ_T0008109.1 MGP_CBAJ_G0006604.1 mouse_genomes_project 5 106397273 106686997 + 4930467D21Rik lincRNA lincRNA MGP_CBAJ_T0008110.1 MGP_CBAJ_G0006604.1 mouse_genomes_project 5 106397303 106622084 + 4930467D21Rik lincRNA lincRNA MGP_CBAJ_T0004710.1 MGP_CBAJ_G0004060.1 mouse_genomes_project 5 128249887 128256681 + Gm14508 antisense antisense MGP_CBAJ_T0014776.1 MGP_CBAJ_G0012888.1 mouse_genomes_project 5 64601792 64603585 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0071269.1 MGP_CBAJ_G0029217.1 mouse_genomes_project 5 55518044 55555825 + MGP_CBAJ_P0071269 Pi4k2b protein_coding protein_coding MGP_CBAJ_T0071270.1 MGP_CBAJ_G0029217.1 mouse_genomes_project 5 55518076 55528026 + MGP_CBAJ_P0071270 Pi4k2b protein_coding nonsense_mediated_decay MGP_CBAJ_T0071271.1 MGP_CBAJ_G0029217.1 mouse_genomes_project 5 55518080 55555825 + MGP_CBAJ_P0071271 Pi4k2b protein_coding protein_coding MGP_CBAJ_T0071272.1 MGP_CBAJ_G0029217.1 mouse_genomes_project 5 55531114 55533995 + Pi4k2b protein_coding retained_intron MGP_CBAJ_T0001810.1 MGP_CBAJ_G0001727.1 mouse_genomes_project 5 145817636 145820743 - TEC TEC MGP_CBAJ_T0014713.1 MGP_CBAJ_G0012825.1 mouse_genomes_project 5 33067164 33067490 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101963.1 MGP_CBAJ_G0039994.1 mouse_genomes_project 5 170025928 170044864 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0014873.1 MGP_CBAJ_G0012985.1 mouse_genomes_project 5 113796961 113797183 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010560.1 MGP_CBAJ_G0008698.1 mouse_genomes_project 5 69419256 69419334 + Mir574 miRNA miRNA MGP_CBAJ_T0070164.1 MGP_CBAJ_G0029037.1 mouse_genomes_project 5 28338496 28381188 + MGP_CBAJ_P0070164 Rbm33 protein_coding non_stop_decay MGP_CBAJ_T0070165.1 MGP_CBAJ_G0029037.1 mouse_genomes_project 5 28338552 28448859 + MGP_CBAJ_P0070165 Rbm33 protein_coding protein_coding MGP_CBAJ_T0070166.1 MGP_CBAJ_G0029037.1 mouse_genomes_project 5 28338552 28451998 + MGP_CBAJ_P0070166 Rbm33 protein_coding protein_coding MGP_CBAJ_T0070167.1 MGP_CBAJ_G0029037.1 mouse_genomes_project 5 28338577 28384068 + MGP_CBAJ_P0070167 Rbm33 protein_coding protein_coding MGP_CBAJ_T0070168.1 MGP_CBAJ_G0029037.1 mouse_genomes_project 5 28424952 28446430 + MGP_CBAJ_P0070168 Rbm33 protein_coding protein_coding MGP_CBAJ_T0070169.1 MGP_CBAJ_G0029037.1 mouse_genomes_project 5 28443412 28446783 + MGP_CBAJ_P0070169 Rbm33 protein_coding protein_coding MGP_CBAJ_T0099330.1 MGP_CBAJ_G0037585.1 mouse_genomes_project 5 7520497 7520599 - Gm23312 snRNA snRNA MGP_CBAJ_T0001720.1 MGP_CBAJ_G0001638.1 mouse_genomes_project 5 122582949 122583489 + TEC TEC MGP_CBAJ_T0017888.1 MGP_CBAJ_G0015340.1 mouse_genomes_project 5 55790395 55811781 - 5033403H07Rik processed_transcript lincRNA MGP_CBAJ_T0017889.1 MGP_CBAJ_G0015340.1 mouse_genomes_project 5 55790407 55809647 - 5033403H07Rik processed_transcript lincRNA MGP_CBAJ_T0017890.1 MGP_CBAJ_G0015340.1 mouse_genomes_project 5 55807783 55809698 - 5033403H07Rik processed_transcript retained_intron MGP_CBAJ_T0099389.1 MGP_CBAJ_G0037644.1 mouse_genomes_project 5 127664207 127664348 + Gm24265 snRNA snRNA MGP_CBAJ_T0004613.1 MGP_CBAJ_G0003989.1 mouse_genomes_project 5 55880453 55881955 - Gm17182 antisense antisense MGP_CBAJ_T0072445.1 MGP_CBAJ_G0029457.1 mouse_genomes_project 5 109966857 109991743 - MGP_CBAJ_P0072445 Plac8 protein_coding protein_coding MGP_CBAJ_T0072446.1 MGP_CBAJ_G0029457.1 mouse_genomes_project 5 109966858 109979405 - MGP_CBAJ_P0072446 Plac8 protein_coding protein_coding MGP_CBAJ_T0072447.1 MGP_CBAJ_G0029457.1 mouse_genomes_project 5 109966859 109979970 - MGP_CBAJ_P0072447 Plac8 protein_coding protein_coding MGP_CBAJ_T0072448.1 MGP_CBAJ_G0029457.1 mouse_genomes_project 5 109978983 109991690 - Plac8 protein_coding retained_intron MGP_CBAJ_T0074286.1 MGP_CBAJ_G0029806.1 mouse_genomes_project 5 144864604 144915395 + MGP_CBAJ_P0074286 Rabgef1 protein_coding protein_coding MGP_CBAJ_T0074287.1 MGP_CBAJ_G0029806.1 mouse_genomes_project 5 144864630 144911495 + MGP_CBAJ_P0074287 Rabgef1 protein_coding protein_coding MGP_CBAJ_T0074288.1 MGP_CBAJ_G0029806.1 mouse_genomes_project 5 144883595 144909805 + MGP_CBAJ_P0074288 Rabgef1 protein_coding protein_coding MGP_CBAJ_T0074289.1 MGP_CBAJ_G0029806.1 mouse_genomes_project 5 144883595 144915390 + MGP_CBAJ_P0074289 Rabgef1 protein_coding protein_coding MGP_CBAJ_T0074290.1 MGP_CBAJ_G0029806.1 mouse_genomes_project 5 144883642 144905394 + Rabgef1 protein_coding processed_transcript MGP_CBAJ_T0074291.1 MGP_CBAJ_G0029806.1 mouse_genomes_project 5 144883654 144887756 + Rabgef1 protein_coding retained_intron MGP_CBAJ_T0074292.1 MGP_CBAJ_G0029806.1 mouse_genomes_project 5 144905356 144912044 + Rabgef1 protein_coding retained_intron MGP_CBAJ_T0074293.1 MGP_CBAJ_G0029806.1 mouse_genomes_project 5 144912433 144914028 + Rabgef1 protein_coding retained_intron MGP_CBAJ_T0074294.1 MGP_CBAJ_G0029806.1 mouse_genomes_project 5 144914218 144915103 + MGP_CBAJ_P0074294 Rabgef1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073488.1 MGP_CBAJ_G0029666.1 mouse_genomes_project 5 133483321 133490714 + MGP_CBAJ_P0073488 Sds protein_coding protein_coding MGP_CBAJ_T0073489.1 MGP_CBAJ_G0029666.1 mouse_genomes_project 5 133483326 133490714 + MGP_CBAJ_P0073489 Sds protein_coding protein_coding MGP_CBAJ_T0073490.1 MGP_CBAJ_G0029666.1 mouse_genomes_project 5 133485667 133487469 + MGP_CBAJ_P0073490 Sds protein_coding protein_coding MGP_CBAJ_T0073491.1 MGP_CBAJ_G0029666.1 mouse_genomes_project 5 133487144 133487670 + Sds protein_coding retained_intron MGP_CBAJ_T0072608.1 MGP_CBAJ_G0029495.1 mouse_genomes_project 5 116683383 116689000 - MGP_CBAJ_P0072608 Barhl2 protein_coding protein_coding MGP_CBAJ_T0010569.1 MGP_CBAJ_G0008707.1 mouse_genomes_project 5 95077627 95077719 - Mir3969 miRNA miRNA MGP_CBAJ_T0010590.1 MGP_CBAJ_G0008728.1 mouse_genomes_project 5 137392440 137392499 - Mir7647 miRNA miRNA MGP_CBAJ_T0014930.1 MGP_CBAJ_G0013042.1 mouse_genomes_project 5 137320349 137320727 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004652.1 MGP_CBAJ_G0004023.1 mouse_genomes_project 5 105360173 105361528 - Gm33050 antisense antisense MGP_CBAJ_T0001784.1 MGP_CBAJ_G0001702.1 mouse_genomes_project 5 137944338 137945842 + TEC TEC MGP_CBAJ_T0071259.1 MGP_CBAJ_G0029213.1 mouse_genomes_project 5 55106854 55117100 + MGP_CBAJ_P0071259 Sod3 protein_coding protein_coding MGP_CBAJ_T0073877.1 MGP_CBAJ_G0029734.1 mouse_genomes_project 5 137339344 137341288 - MGP_CBAJ_P0073877 Il31 protein_coding protein_coding MGP_CBAJ_T0073878.1 MGP_CBAJ_G0029734.1 mouse_genomes_project 5 137339345 137341782 - MGP_CBAJ_P0073878 Il31 protein_coding protein_coding MGP_CBAJ_T0073879.1 MGP_CBAJ_G0029734.1 mouse_genomes_project 5 137339590 137348651 - MGP_CBAJ_P0073879 Il31 protein_coding protein_coding MGP_CBAJ_T0073880.1 MGP_CBAJ_G0029734.1 mouse_genomes_project 5 137341350 137341711 - Il31 protein_coding processed_transcript MGP_CBAJ_T0001503.1 MGP_CBAJ_G0001424.1 mouse_genomes_project 5 46629265 46632615 - TEC TEC MGP_CBAJ_T0072986.1 MGP_CBAJ_G0029570.1 mouse_genomes_project 5 123906592 123908825 - MGP_CBAJ_P0072986 Gm6583 protein_coding protein_coding MGP_CBAJ_T0101145.1 MGP_CBAJ_G0039334.1 mouse_genomes_project 5 95383190 95385813 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101146.1 MGP_CBAJ_G0039334.1 mouse_genomes_project 5 95383349 95384474 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0008361.1 MGP_CBAJ_G0006774.1 mouse_genomes_project 5 167627629 167659222 + BC028471 lincRNA lincRNA MGP_CBAJ_T0008362.1 MGP_CBAJ_G0006774.1 mouse_genomes_project 5 167629039 167639367 + BC028471 lincRNA lincRNA MGP_CBAJ_T0008363.1 MGP_CBAJ_G0006774.1 mouse_genomes_project 5 167629041 167648831 + BC028471 lincRNA lincRNA MGP_CBAJ_T0008364.1 MGP_CBAJ_G0006774.1 mouse_genomes_project 5 167629256 167658112 + BC028471 lincRNA lincRNA MGP_CBAJ_T0008365.1 MGP_CBAJ_G0006774.1 mouse_genomes_project 5 167639332 167659222 + BC028471 lincRNA lincRNA MGP_CBAJ_T0008366.1 MGP_CBAJ_G0006774.1 mouse_genomes_project 5 167639344 167640166 + BC028471 lincRNA lincRNA MGP_CBAJ_T0073659.1 MGP_CBAJ_G0029703.1 mouse_genomes_project 5 135335344 135581102 - MGP_CBAJ_P0073659 protein_coding protein_coding MGP_CBAJ_T0073660.1 MGP_CBAJ_G0029703.1 mouse_genomes_project 5 135343323 135579076 - MGP_CBAJ_P0073660 protein_coding protein_coding MGP_CBAJ_T0073661.1 MGP_CBAJ_G0029703.1 mouse_genomes_project 5 135343415 135352291 - protein_coding retained_intron MGP_CBAJ_T0073662.1 MGP_CBAJ_G0029703.1 mouse_genomes_project 5 135343415 135431009 - MGP_CBAJ_P0073662 protein_coding protein_coding MGP_CBAJ_T0073663.1 MGP_CBAJ_G0029703.1 mouse_genomes_project 5 135359304 135360540 - protein_coding retained_intron MGP_CBAJ_T0073664.1 MGP_CBAJ_G0029703.1 mouse_genomes_project 5 135366030 135417461 - protein_coding processed_transcript MGP_CBAJ_T0073665.1 MGP_CBAJ_G0029703.1 mouse_genomes_project 5 135366036 135387766 - protein_coding processed_transcript MGP_CBAJ_T0073666.1 MGP_CBAJ_G0029703.1 mouse_genomes_project 5 135374393 135581353 - MGP_CBAJ_P0073666 protein_coding protein_coding MGP_CBAJ_T0073667.1 MGP_CBAJ_G0029703.1 mouse_genomes_project 5 135377060 135520681 - MGP_CBAJ_P0073667 protein_coding protein_coding MGP_CBAJ_T0073668.1 MGP_CBAJ_G0029703.1 mouse_genomes_project 5 135387793 135419123 - protein_coding processed_transcript MGP_CBAJ_T0073669.1 MGP_CBAJ_G0029703.1 mouse_genomes_project 5 135430983 135579142 - protein_coding processed_transcript MGP_CBAJ_T0074546.1 MGP_CBAJ_G0029849.1 mouse_genomes_project 5 151029942 151033055 - MGP_CBAJ_P0074546 Ccl24 protein_coding protein_coding MGP_CBAJ_T0074547.1 MGP_CBAJ_G0029849.1 mouse_genomes_project 5 151030585 151033055 - MGP_CBAJ_P0074547 Ccl24 protein_coding protein_coding MGP_CBAJ_T0075670.1 MGP_CBAJ_G0030083.1 mouse_genomes_project 5 168988590 169006257 - MGP_CBAJ_P0075670 Zar1l protein_coding protein_coding MGP_CBAJ_T0069715.1 MGP_CBAJ_G0028944.1 mouse_genomes_project 5 5982353 6008053 - MGP_CBAJ_P0069715 Dbf4 protein_coding protein_coding MGP_CBAJ_T0069716.1 MGP_CBAJ_G0028944.1 mouse_genomes_project 5 5982597 6007913 - MGP_CBAJ_P0069716 Dbf4 protein_coding protein_coding MGP_CBAJ_T0069717.1 MGP_CBAJ_G0028944.1 mouse_genomes_project 5 5983232 5985686 - Dbf4 protein_coding retained_intron MGP_CBAJ_T0069719.1 MGP_CBAJ_G0028944.1 mouse_genomes_project 5 5987041 6008054 - Dbf4 protein_coding retained_intron MGP_CBAJ_T0069720.1 MGP_CBAJ_G0028944.1 mouse_genomes_project 5 5988523 5990621 - Dbf4 protein_coding retained_intron MGP_CBAJ_T0069721.1 MGP_CBAJ_G0028944.1 mouse_genomes_project 5 6003807 6008067 - Dbf4 protein_coding processed_transcript MGP_CBAJ_T0069722.1 MGP_CBAJ_G0028944.1 mouse_genomes_project 5 6007556 6008042 - Dbf4 protein_coding retained_intron MGP_CBAJ_T0014882.1 MGP_CBAJ_G0012994.1 mouse_genomes_project 5 116988114 116988762 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008075.1 MGP_CBAJ_G0006574.1 mouse_genomes_project 5 82351764 82388697 + lincRNA lincRNA MGP_CBAJ_T0008076.1 MGP_CBAJ_G0006574.1 mouse_genomes_project 5 82352070 82388653 + lincRNA lincRNA MGP_CBAJ_T0101964.1 MGP_CBAJ_G0039995.1 mouse_genomes_project 5 170100774 170134607 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0070861.1 MGP_CBAJ_G0029146.1 mouse_genomes_project 5 36533878 36560673 - MGP_CBAJ_P0070861 Cpz protein_coding protein_coding MGP_CBAJ_T0070862.1 MGP_CBAJ_G0029146.1 mouse_genomes_project 5 36548954 36560549 - MGP_CBAJ_P0070862 Cpz protein_coding protein_coding MGP_CBAJ_T0100618.1 MGP_CBAJ_G0038873.1 mouse_genomes_project 5 83750460 83750583 - Gm22011 snoRNA snoRNA MGP_CBAJ_T0004636.1 MGP_CBAJ_G0004009.1 mouse_genomes_project 5 80899810 80900410 - Gm42802 antisense antisense MGP_CBAJ_T0075391.1 MGP_CBAJ_G0030022.1 mouse_genomes_project 5 162431995 162465744 + MGP_CBAJ_P0075391 Arpc1a protein_coding protein_coding MGP_CBAJ_T0075392.1 MGP_CBAJ_G0030022.1 mouse_genomes_project 5 162432049 162447935 + Arpc1a protein_coding processed_transcript MGP_CBAJ_T0075393.1 MGP_CBAJ_G0030022.1 mouse_genomes_project 5 162432071 162465739 + MGP_CBAJ_P0075393 Arpc1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0075394.1 MGP_CBAJ_G0030022.1 mouse_genomes_project 5 162432264 162448980 + MGP_CBAJ_P0075394 Arpc1a protein_coding protein_coding MGP_CBAJ_T0075395.1 MGP_CBAJ_G0030022.1 mouse_genomes_project 5 162448008 162450630 + Arpc1a protein_coding retained_intron MGP_CBAJ_T0075396.1 MGP_CBAJ_G0030022.1 mouse_genomes_project 5 162461206 162465575 + Arpc1a protein_coding retained_intron MGP_CBAJ_T0071122.1 MGP_CBAJ_G0029195.1 mouse_genomes_project 5 45728621 45774852 + MGP_CBAJ_P0071122 Cd38 protein_coding protein_coding MGP_CBAJ_T0071123.1 MGP_CBAJ_G0029195.1 mouse_genomes_project 5 45728928 45729809 + Cd38 protein_coding retained_intron MGP_CBAJ_T0100610.1 MGP_CBAJ_G0038865.1 mouse_genomes_project 5 64653702 64653825 - Gm23708 snoRNA snoRNA MGP_CBAJ_T0014651.1 MGP_CBAJ_G0012763.1 mouse_genomes_project 5 12159052 12160016 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011478.1 MGP_CBAJ_G0009616.1 mouse_genomes_project 5 122727638 122727798 - Gm27680 misc_RNA misc_RNA MGP_CBAJ_T0014866.1 MGP_CBAJ_G0012978.1 mouse_genomes_project 5 110853625 110853917 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0073458.1 MGP_CBAJ_G0029659.1 mouse_genomes_project 5 130861948 130887915 + MGP_CBAJ_P0073458 2410131K14Rik protein_coding protein_coding MGP_CBAJ_T0004630.1 MGP_CBAJ_G0004004.1 mouse_genomes_project 5 76936020 76963827 - Gm43477 antisense antisense MGP_CBAJ_T0071659.1 MGP_CBAJ_G0029282.1 mouse_genomes_project 5 77915155 77926349 - protein_coding retained_intron MGP_CBAJ_T0071660.1 MGP_CBAJ_G0029282.1 mouse_genomes_project 5 77915463 77928359 - MGP_CBAJ_P0071660 protein_coding protein_coding MGP_CBAJ_T0098403.1 MGP_CBAJ_G0036669.1 mouse_genomes_project 5 30617314 30617759 + Gm43755 sense_intronic sense_intronic MGP_CBAJ_T0004756.1 MGP_CBAJ_G0004091.1 mouse_genomes_project 5 139100912 139101442 + Gm42838 antisense antisense MGP_CBAJ_T0099349.1 MGP_CBAJ_G0037604.1 mouse_genomes_project 5 52811984 52812091 - Gm22618 snRNA snRNA MGP_CBAJ_T0001632.1 MGP_CBAJ_G0001551.1 mouse_genomes_project 5 72929325 72931020 - TEC TEC MGP_CBAJ_T0001675.1 MGP_CBAJ_G0001593.1 mouse_genomes_project 5 99923529 99924351 - TEC TEC MGP_CBAJ_T0017935.1 MGP_CBAJ_G0015356.1 mouse_genomes_project 5 144451478 144463218 + processed_transcript processed_transcript MGP_CBAJ_T0017936.1 MGP_CBAJ_G0015356.1 mouse_genomes_project 5 144451919 144462667 + processed_transcript processed_transcript MGP_CBAJ_T0017937.1 MGP_CBAJ_G0015356.1 mouse_genomes_project 5 144454161 144456281 + processed_transcript retained_intron MGP_CBAJ_T0017938.1 MGP_CBAJ_G0015356.1 mouse_genomes_project 5 144457393 144458713 + processed_transcript retained_intron MGP_CBAJ_T0017939.1 MGP_CBAJ_G0015356.1 mouse_genomes_project 5 144458787 144462712 + processed_transcript processed_transcript MGP_CBAJ_T0017940.1 MGP_CBAJ_G0015356.1 mouse_genomes_project 5 144461816 144462829 + processed_transcript processed_transcript MGP_CBAJ_T0014989.1 MGP_CBAJ_G0013101.1 mouse_genomes_project 5 165336531 165336753 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0072010.1 MGP_CBAJ_G0029348.1 mouse_genomes_project 5 94663440 94678779 - MGP_CBAJ_P0072010 Ugt2b37 protein_coding protein_coding MGP_CBAJ_T0008057.1 MGP_CBAJ_G0006560.1 mouse_genomes_project 5 78752649 78760797 + Gm34411 lincRNA lincRNA MGP_CBAJ_T0075551.1 MGP_CBAJ_G0030065.1 mouse_genomes_project 5 165502093 165689832 - MGP_CBAJ_P0075551 Flt1 protein_coding protein_coding MGP_CBAJ_T0075552.1 MGP_CBAJ_G0030065.1 mouse_genomes_project 5 165545968 165587246 - Flt1 protein_coding processed_transcript MGP_CBAJ_T0075553.1 MGP_CBAJ_G0030065.1 mouse_genomes_project 5 165565415 165568070 - Flt1 protein_coding processed_transcript MGP_CBAJ_T0075554.1 MGP_CBAJ_G0030065.1 mouse_genomes_project 5 165587986 165689809 - MGP_CBAJ_P0075554 Flt1 protein_coding protein_coding MGP_CBAJ_T0075555.1 MGP_CBAJ_G0030065.1 mouse_genomes_project 5 165597615 165599645 - Flt1 protein_coding retained_intron MGP_CBAJ_T0075556.1 MGP_CBAJ_G0030065.1 mouse_genomes_project 5 165607092 165689809 - Flt1 protein_coding processed_transcript MGP_CBAJ_T0014686.1 MGP_CBAJ_G0012798.1 mouse_genomes_project 5 23780510 23780908 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0007959.1 MGP_CBAJ_G0006488.1 mouse_genomes_project 5 24056818 24057400 + 2310074N15Rik lincRNA lincRNA MGP_CBAJ_T0004587.1 MGP_CBAJ_G0003971.1 mouse_genomes_project 5 37885240 37887060 + Gm43701 antisense antisense MGP_CBAJ_T0069731.1 MGP_CBAJ_G0028946.1 mouse_genomes_project 5 6090769 6259183 - MGP_CBAJ_P0069731 Rundc3b protein_coding protein_coding MGP_CBAJ_T0069732.1 MGP_CBAJ_G0028946.1 mouse_genomes_project 5 6092702 6259183 - MGP_CBAJ_P0069732 Rundc3b protein_coding protein_coding MGP_CBAJ_T0014902.1 MGP_CBAJ_G0013014.1 mouse_genomes_project 5 121806628 121808075 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0072798.1 MGP_CBAJ_G0029530.1 mouse_genomes_project 5 119244087 119260074 + MGP_CBAJ_P0072798 Fgfrl1 protein_coding protein_coding MGP_CBAJ_T0072799.1 MGP_CBAJ_G0029530.1 mouse_genomes_project 5 119250779 119259877 + MGP_CBAJ_P0072799 Fgfrl1 protein_coding protein_coding MGP_CBAJ_T0072800.1 MGP_CBAJ_G0029530.1 mouse_genomes_project 5 119250817 119263462 + MGP_CBAJ_P0072800 Fgfrl1 protein_coding protein_coding MGP_CBAJ_T0072801.1 MGP_CBAJ_G0029530.1 mouse_genomes_project 5 119251051 119263434 + MGP_CBAJ_P0072801 Fgfrl1 protein_coding protein_coding MGP_CBAJ_T0072802.1 MGP_CBAJ_G0029530.1 mouse_genomes_project 5 119261611 119262410 + Fgfrl1 protein_coding retained_intron MGP_CBAJ_T0072332.1 MGP_CBAJ_G0029433.1 mouse_genomes_project 5 105105064 105166422 + MGP_CBAJ_P0072332 Mrpl1 protein_coding protein_coding MGP_CBAJ_T0072333.1 MGP_CBAJ_G0029433.1 mouse_genomes_project 5 105105686 105166404 + MGP_CBAJ_P0072333 Mrpl1 protein_coding protein_coding MGP_CBAJ_T0072334.1 MGP_CBAJ_G0029433.1 mouse_genomes_project 5 105105715 105137196 + MGP_CBAJ_P0072334 Mrpl1 protein_coding protein_coding MGP_CBAJ_T0014874.1 MGP_CBAJ_G0012986.1 mouse_genomes_project 5 115023258 115023765 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0074140.1 MGP_CBAJ_G0029777.1 mouse_genomes_project 5 139599139 139653034 + MGP_CBAJ_P0074140 Aacs protein_coding protein_coding MGP_CBAJ_T0074141.1 MGP_CBAJ_G0029777.1 mouse_genomes_project 5 139638604 139648361 + Aacs protein_coding retained_intron MGP_CBAJ_T0074142.1 MGP_CBAJ_G0029777.1 mouse_genomes_project 5 139645116 139647520 + Aacs protein_coding retained_intron MGP_CBAJ_T0074143.1 MGP_CBAJ_G0029777.1 mouse_genomes_project 5 139648322 139648825 + Aacs protein_coding processed_transcript MGP_CBAJ_T0074144.1 MGP_CBAJ_G0029777.1 mouse_genomes_project 5 139649820 139650618 + Aacs protein_coding processed_transcript MGP_CBAJ_T0074145.1 MGP_CBAJ_G0029777.1 mouse_genomes_project 5 139650866 139651979 + Aacs protein_coding processed_transcript MGP_CBAJ_T0001830.1 MGP_CBAJ_G0001747.1 mouse_genomes_project 5 147437172 147438446 - TEC TEC MGP_CBAJ_T0014942.1 MGP_CBAJ_G0013054.1 mouse_genomes_project 5 151385118 151385275 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099334.1 MGP_CBAJ_G0037589.1 mouse_genomes_project 5 21824071 21824178 - Gm22887 snRNA snRNA MGP_CBAJ_T0070213.1 MGP_CBAJ_G0029047.1 mouse_genomes_project 5 30289547 30302714 - MGP_CBAJ_P0070213 protein_coding unknown_likely_coding MGP_CBAJ_T0070214.1 MGP_CBAJ_G0029047.1 mouse_genomes_project 5 30289615 30302781 - protein_coding retained_intron MGP_CBAJ_T0070215.1 MGP_CBAJ_G0029047.1 mouse_genomes_project 5 30289682 30302736 - MGP_CBAJ_P0070215 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070216.1 MGP_CBAJ_G0029047.1 mouse_genomes_project 5 30290531 30302748 - MGP_CBAJ_P0070216 protein_coding protein_coding MGP_CBAJ_T0070217.1 MGP_CBAJ_G0029047.1 mouse_genomes_project 5 30292149 30302719 - MGP_CBAJ_P0070217 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070218.1 MGP_CBAJ_G0029047.1 mouse_genomes_project 5 30292759 30302753 - protein_coding retained_intron MGP_CBAJ_T0070219.1 MGP_CBAJ_G0029047.1 mouse_genomes_project 5 30293016 30302743 - MGP_CBAJ_P0070219 protein_coding protein_coding MGP_CBAJ_T0070220.1 MGP_CBAJ_G0029047.1 mouse_genomes_project 5 30297059 30302689 - protein_coding processed_transcript MGP_CBAJ_T0101957.1 MGP_CBAJ_G0039988.1 mouse_genomes_project 5 159475071 159475587 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0001693.1 MGP_CBAJ_G0001611.1 mouse_genomes_project 5 110272931 110274007 - TEC TEC MGP_CBAJ_T0071414.1 MGP_CBAJ_G0029244.1 mouse_genomes_project 5 69860977 69896543 + MGP_CBAJ_P0071414 Klb protein_coding protein_coding MGP_CBAJ_T0071415.1 MGP_CBAJ_G0029244.1 mouse_genomes_project 5 69861070 69862910 + Klb protein_coding retained_intron MGP_CBAJ_T0071416.1 MGP_CBAJ_G0029244.1 mouse_genomes_project 5 69861071 69892067 + MGP_CBAJ_P0071416 Klb protein_coding nonsense_mediated_decay MGP_CBAJ_T0073762.1 MGP_CBAJ_G0029719.1 mouse_genomes_project 5 136357259 136381874 + MGP_CBAJ_P0073762 P2rx4 protein_coding protein_coding MGP_CBAJ_T0073763.1 MGP_CBAJ_G0029719.1 mouse_genomes_project 5 136357284 136361203 + P2rx4 protein_coding retained_intron MGP_CBAJ_T0073764.1 MGP_CBAJ_G0029719.1 mouse_genomes_project 5 136357285 136369140 + P2rx4 protein_coding retained_intron MGP_CBAJ_T0073765.1 MGP_CBAJ_G0029719.1 mouse_genomes_project 5 136357295 136377507 + MGP_CBAJ_P0073765 P2rx4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073766.1 MGP_CBAJ_G0029719.1 mouse_genomes_project 5 136357299 136381180 + MGP_CBAJ_P0073766 P2rx4 protein_coding protein_coding MGP_CBAJ_T0073767.1 MGP_CBAJ_G0029719.1 mouse_genomes_project 5 136357369 136380459 + MGP_CBAJ_P0073767 P2rx4 protein_coding protein_coding MGP_CBAJ_T0073768.1 MGP_CBAJ_G0029719.1 mouse_genomes_project 5 136357369 136380459 + MGP_CBAJ_P0073768 P2rx4 protein_coding protein_coding MGP_CBAJ_T0073769.1 MGP_CBAJ_G0029719.1 mouse_genomes_project 5 136374313 136377406 + P2rx4 protein_coding retained_intron MGP_CBAJ_T0073770.1 MGP_CBAJ_G0029719.1 mouse_genomes_project 5 136379799 136380721 + P2rx4 protein_coding processed_transcript MGP_CBAJ_T0069903.1 MGP_CBAJ_G0028984.1 mouse_genomes_project 5 20867542 20913506 - MGP_CBAJ_P0069903 Napepld protein_coding protein_coding MGP_CBAJ_T0069904.1 MGP_CBAJ_G0028984.1 mouse_genomes_project 5 20867544 20913508 - MGP_CBAJ_P0069904 Napepld protein_coding protein_coding MGP_CBAJ_T0074733.1 MGP_CBAJ_G0029884.1 mouse_genomes_project 5 153122036 153124556 + MGP_CBAJ_P0074733 Ache protein_coding protein_coding MGP_CBAJ_T0074734.1 MGP_CBAJ_G0029884.1 mouse_genomes_project 5 153122283 153124556 + MGP_CBAJ_P0074734 Ache protein_coding protein_coding MGP_CBAJ_T0074735.1 MGP_CBAJ_G0029884.1 mouse_genomes_project 5 153122283 153124556 + MGP_CBAJ_P0074735 Ache protein_coding protein_coding MGP_CBAJ_T0074736.1 MGP_CBAJ_G0029884.1 mouse_genomes_project 5 153122794 153128877 + MGP_CBAJ_P0074736 Ache protein_coding protein_coding MGP_CBAJ_T0074737.1 MGP_CBAJ_G0029884.1 mouse_genomes_project 5 153122800 153128872 + MGP_CBAJ_P0074737 Ache protein_coding protein_coding MGP_CBAJ_T0074738.1 MGP_CBAJ_G0029884.1 mouse_genomes_project 5 153122801 153128871 + MGP_CBAJ_P0074738 Ache protein_coding protein_coding MGP_CBAJ_T0074739.1 MGP_CBAJ_G0029884.1 mouse_genomes_project 5 153122802 153126750 + Ache protein_coding retained_intron MGP_CBAJ_T0074740.1 MGP_CBAJ_G0029884.1 mouse_genomes_project 5 153123489 153124556 + MGP_CBAJ_P0074740 Ache protein_coding protein_coding MGP_CBAJ_T0074741.1 MGP_CBAJ_G0029884.1 mouse_genomes_project 5 153123648 153124556 + MGP_CBAJ_P0074741 Ache protein_coding protein_coding MGP_CBAJ_T0008031.1 MGP_CBAJ_G0006539.1 mouse_genomes_project 5 55799411 55813098 + Gm42746 lincRNA lincRNA MGP_CBAJ_T0073980.1 MGP_CBAJ_G0029751.1 mouse_genomes_project 5 138079994 138083173 + MGP_CBAJ_P0073980 Ogfod2 protein_coding protein_coding MGP_CBAJ_T0073981.1 MGP_CBAJ_G0029751.1 mouse_genomes_project 5 138080004 138082769 + Ogfod2 protein_coding retained_intron MGP_CBAJ_T0073982.1 MGP_CBAJ_G0029751.1 mouse_genomes_project 5 138080008 138082190 + MGP_CBAJ_P0073982 Ogfod2 protein_coding protein_coding MGP_CBAJ_T0073983.1 MGP_CBAJ_G0029751.1 mouse_genomes_project 5 138080023 138082058 + Ogfod2 protein_coding retained_intron MGP_CBAJ_T0073984.1 MGP_CBAJ_G0029751.1 mouse_genomes_project 5 138080023 138082146 + MGP_CBAJ_P0073984 Ogfod2 protein_coding protein_coding MGP_CBAJ_T0073985.1 MGP_CBAJ_G0029751.1 mouse_genomes_project 5 138080040 138082450 + MGP_CBAJ_P0073985 Ogfod2 protein_coding protein_coding MGP_CBAJ_T0073986.1 MGP_CBAJ_G0029751.1 mouse_genomes_project 5 138080114 138082651 + MGP_CBAJ_P0073986 Ogfod2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073987.1 MGP_CBAJ_G0029751.1 mouse_genomes_project 5 138080498 138081901 + Ogfod2 protein_coding retained_intron MGP_CBAJ_T0073988.1 MGP_CBAJ_G0029751.1 mouse_genomes_project 5 138080986 138082566 + Ogfod2 protein_coding retained_intron MGP_CBAJ_T0004547.1 MGP_CBAJ_G0003937.1 mouse_genomes_project 5 3133633 3136840 + antisense antisense MGP_CBAJ_T0004651.1 MGP_CBAJ_G0004022.1 mouse_genomes_project 5 100550927 100566369 + Gm43599 antisense antisense MGP_CBAJ_T0014679.1 MGP_CBAJ_G0012791.1 mouse_genomes_project 5 22299827 22300438 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001521.1 MGP_CBAJ_G0001442.1 mouse_genomes_project 5 50970573 50973058 - TEC TEC MGP_CBAJ_T0008011.1 MGP_CBAJ_G0006520.1 mouse_genomes_project 5 41396329 41407417 - Gm35191 lincRNA lincRNA MGP_CBAJ_T0074536.1 MGP_CBAJ_G0029847.1 mouse_genomes_project 5 150855458 151001282 - MGP_CBAJ_P0074536 Hip1 protein_coding protein_coding MGP_CBAJ_T0074537.1 MGP_CBAJ_G0029847.1 mouse_genomes_project 5 150855462 150887008 - MGP_CBAJ_P0074537 Hip1 protein_coding protein_coding MGP_CBAJ_T0074538.1 MGP_CBAJ_G0029847.1 mouse_genomes_project 5 150880815 150881995 - Hip1 protein_coding retained_intron MGP_CBAJ_T0074539.1 MGP_CBAJ_G0029847.1 mouse_genomes_project 5 150882121 150893403 - MGP_CBAJ_P0074539 Hip1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074540.1 MGP_CBAJ_G0029847.1 mouse_genomes_project 5 150886298 151001287 - Hip1 protein_coding retained_intron MGP_CBAJ_T0074541.1 MGP_CBAJ_G0029847.1 mouse_genomes_project 5 150890393 150907003 - Hip1 protein_coding processed_transcript MGP_CBAJ_T0074542.1 MGP_CBAJ_G0029847.1 mouse_genomes_project 5 150902668 150944800 - MGP_CBAJ_P0074542 Hip1 protein_coding protein_coding MGP_CBAJ_T0074543.1 MGP_CBAJ_G0029847.1 mouse_genomes_project 5 150906886 150912689 - Hip1 protein_coding retained_intron MGP_CBAJ_T0074544.1 MGP_CBAJ_G0029847.1 mouse_genomes_project 5 150913564 151001282 - Hip1 protein_coding retained_intron MGP_CBAJ_T0075336.1 MGP_CBAJ_G0030010.1 mouse_genomes_project 5 161115349 161145445 - MGP_CBAJ_P0075336 Ccz1 protein_coding protein_coding MGP_CBAJ_T0075337.1 MGP_CBAJ_G0030010.1 mouse_genomes_project 5 161119057 161120167 - Ccz1 protein_coding processed_transcript MGP_CBAJ_T0075338.1 MGP_CBAJ_G0030010.1 mouse_genomes_project 5 161120060 161135138 - Ccz1 protein_coding retained_intron MGP_CBAJ_T0075339.1 MGP_CBAJ_G0030010.1 mouse_genomes_project 5 161139848 161145469 - Ccz1 protein_coding retained_intron MGP_CBAJ_T0075340.1 MGP_CBAJ_G0030010.1 mouse_genomes_project 5 161143065 161145469 - Ccz1 protein_coding retained_intron MGP_CBAJ_T0001528.1 MGP_CBAJ_G0001448.1 mouse_genomes_project 5 51329961 51331898 - TEC TEC MGP_CBAJ_T0072469.1 MGP_CBAJ_G0029462.1 mouse_genomes_project 5 110261393 110279663 - MGP_CBAJ_P0072469 Fam175a protein_coding nonsense_mediated_decay MGP_CBAJ_T0072470.1 MGP_CBAJ_G0029462.1 mouse_genomes_project 5 110261393 110279688 - MGP_CBAJ_P0072470 Fam175a protein_coding protein_coding MGP_CBAJ_T0072471.1 MGP_CBAJ_G0029462.1 mouse_genomes_project 5 110261393 110279666 - MGP_CBAJ_P0072471 Fam175a protein_coding nonsense_mediated_decay MGP_CBAJ_T0072472.1 MGP_CBAJ_G0029462.1 mouse_genomes_project 5 110261393 110279663 - MGP_CBAJ_P0072472 Fam175a protein_coding nonsense_mediated_decay MGP_CBAJ_T0072473.1 MGP_CBAJ_G0029462.1 mouse_genomes_project 5 110261404 110279663 - MGP_CBAJ_P0072473 Fam175a protein_coding protein_coding MGP_CBAJ_T0072474.1 MGP_CBAJ_G0029462.1 mouse_genomes_project 5 110262526 110263516 - Fam175a protein_coding retained_intron MGP_CBAJ_T0072475.1 MGP_CBAJ_G0029462.1 mouse_genomes_project 5 110268515 110279664 - MGP_CBAJ_P0072475 Fam175a protein_coding nonsense_mediated_decay MGP_CBAJ_T0072476.1 MGP_CBAJ_G0029462.1 mouse_genomes_project 5 110276474 110279670 - Fam175a protein_coding retained_intron MGP_CBAJ_T0072477.1 MGP_CBAJ_G0029462.1 mouse_genomes_project 5 110277082 110279663 - Fam175a protein_coding retained_intron MGP_CBAJ_T0008350.1 MGP_CBAJ_G0006766.1 mouse_genomes_project 5 167170951 167176119 - 5930430L01Rik lincRNA lincRNA MGP_CBAJ_T0008351.1 MGP_CBAJ_G0006766.1 mouse_genomes_project 5 167171977 167176111 - 5930430L01Rik lincRNA lincRNA MGP_CBAJ_T0072012.1 MGP_CBAJ_G0029350.1 mouse_genomes_project 5 94763546 94775468 - MGP_CBAJ_P0072012 Ugt2a3 protein_coding protein_coding MGP_CBAJ_T0010610.1 MGP_CBAJ_G0008748.1 mouse_genomes_project 5 155833477 155833573 - Mir339 miRNA miRNA MGP_CBAJ_T0072002.1 MGP_CBAJ_G0029344.1 mouse_genomes_project 5 94289753 94311091 - MGP_CBAJ_P0072002 Ugt2b34 protein_coding protein_coding MGP_CBAJ_T0072003.1 MGP_CBAJ_G0029344.1 mouse_genomes_project 5 94289753 94311091 - MGP_CBAJ_P0072003 Ugt2b34 protein_coding protein_coding MGP_CBAJ_T0001667.1 MGP_CBAJ_G0001585.1 mouse_genomes_project 5 87881087 87884529 + TEC TEC MGP_CBAJ_T0011476.1 MGP_CBAJ_G0009614.1 mouse_genomes_project 5 120521555 120521640 + Gm28000 misc_RNA misc_RNA MGP_CBAJ_T0014789.1 MGP_CBAJ_G0012901.1 mouse_genomes_project 5 68535948 68536761 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004765.1 MGP_CBAJ_G0004098.1 mouse_genomes_project 5 146857070 146860570 + 4930563F08Rik antisense antisense MGP_CBAJ_T0099401.1 MGP_CBAJ_G0037656.1 mouse_genomes_project 5 151364956 151365063 + Gm22450 snRNA snRNA MGP_CBAJ_T0001598.1 MGP_CBAJ_G0001517.1 mouse_genomes_project 5 70074809 70076554 + TEC TEC MGP_CBAJ_T0073239.1 MGP_CBAJ_G0029619.1 mouse_genomes_project 5 127166778 127167385 - MGP_CBAJ_P0073239 Gm10401 protein_coding protein_coding MGP_CBAJ_T0011472.1 MGP_CBAJ_G0009610.1 mouse_genomes_project 5 109824510 109824579 + Gm27997 misc_RNA misc_RNA MGP_CBAJ_T0004598.1 MGP_CBAJ_G0003978.1 mouse_genomes_project 5 45771687 45772358 - Gm16015 antisense antisense MGP_CBAJ_T0014745.1 MGP_CBAJ_G0012857.1 mouse_genomes_project 5 50013624 50014072 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010616.1 MGP_CBAJ_G0008754.1 mouse_genomes_project 5 162168975 162169060 - Mir7039 miRNA miRNA MGP_CBAJ_T0072171.1 MGP_CBAJ_G0029397.1 mouse_genomes_project 5 98807413 98808362 + MGP_CBAJ_P0072171 Pf4 protein_coding protein_coding MGP_CBAJ_T0072172.1 MGP_CBAJ_G0029397.1 mouse_genomes_project 5 98807491 98808135 + MGP_CBAJ_P0072172 Pf4 protein_coding protein_coding MGP_CBAJ_T0072173.1 MGP_CBAJ_G0029397.1 mouse_genomes_project 5 98807869 98808357 + Pf4 protein_coding retained_intron MGP_CBAJ_T0001855.1 MGP_CBAJ_G0001771.1 mouse_genomes_project 5 158049182 158050143 - TEC TEC MGP_CBAJ_T0072513.1 MGP_CBAJ_G0029469.1 mouse_genomes_project 5 113168126 113293860 + Ptpn13 protein_coding retained_intron MGP_CBAJ_T0072514.1 MGP_CBAJ_G0029469.1 mouse_genomes_project 5 113168174 113279939 + MGP_CBAJ_P0072514 Ptpn13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072515.1 MGP_CBAJ_G0029469.1 mouse_genomes_project 5 113168190 113251213 + Ptpn13 protein_coding retained_intron MGP_CBAJ_T0072516.1 MGP_CBAJ_G0029469.1 mouse_genomes_project 5 113168346 113349784 + MGP_CBAJ_P0072516 Ptpn13 protein_coding protein_coding MGP_CBAJ_T0072517.1 MGP_CBAJ_G0029469.1 mouse_genomes_project 5 113279764 113295765 + Ptpn13 protein_coding retained_intron MGP_CBAJ_T0071389.1 MGP_CBAJ_G0029240.1 mouse_genomes_project 5 69531342 69568644 - Tmem156 protein_coding processed_transcript MGP_CBAJ_T0071390.1 MGP_CBAJ_G0029240.1 mouse_genomes_project 5 69539548 69568599 - MGP_CBAJ_P0071390 Tmem156 protein_coding protein_coding MGP_CBAJ_T0071391.1 MGP_CBAJ_G0029240.1 mouse_genomes_project 5 69542096 69557016 - MGP_CBAJ_P0071391 Tmem156 protein_coding unknown_likely_coding MGP_CBAJ_T0071392.1 MGP_CBAJ_G0029240.1 mouse_genomes_project 5 69567719 69568640 - Tmem156 protein_coding retained_intron MGP_CBAJ_T0010558.1 MGP_CBAJ_G0008696.1 mouse_genomes_project 5 68437479 68437575 - Gm22395 miRNA miRNA MGP_CBAJ_T0004566.1 MGP_CBAJ_G0003953.1 mouse_genomes_project 5 24593618 24599710 + Prkag2os1 antisense antisense MGP_CBAJ_T0001506.1 MGP_CBAJ_G0001427.1 mouse_genomes_project 5 47598047 47600112 + TEC TEC MGP_CBAJ_T0008053.1 MGP_CBAJ_G0006557.1 mouse_genomes_project 5 72148692 72154082 + Gm43698 lincRNA lincRNA MGP_CBAJ_T0008054.1 MGP_CBAJ_G0006557.1 mouse_genomes_project 5 72153809 72154903 + Gm43698 lincRNA lincRNA MGP_CBAJ_T0069890.1 MGP_CBAJ_G0028979.1 mouse_genomes_project 5 20525700 20531412 + MGP_CBAJ_P0069890 Fgl2 protein_coding protein_coding MGP_CBAJ_T0014979.1 MGP_CBAJ_G0013091.1 mouse_genomes_project 5 163492177 163492337 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100646.1 MGP_CBAJ_G0038901.1 mouse_genomes_project 5 169217618 169217737 - Gm26013 snoRNA snoRNA MGP_CBAJ_T0014747.1 MGP_CBAJ_G0012859.1 mouse_genomes_project 5 51010527 51011892 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0070484.1 MGP_CBAJ_G0029089.1 mouse_genomes_project 5 31677025 31680720 - MGP_CBAJ_P0070484 Fndc4 protein_coding protein_coding MGP_CBAJ_T0070485.1 MGP_CBAJ_G0029089.1 mouse_genomes_project 5 31677669 31680655 - MGP_CBAJ_P0070485 Fndc4 protein_coding protein_coding MGP_CBAJ_T0070486.1 MGP_CBAJ_G0029089.1 mouse_genomes_project 5 31677669 31678497 - MGP_CBAJ_P0070486 Fndc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070487.1 MGP_CBAJ_G0029089.1 mouse_genomes_project 5 31678055 31678750 - Fndc4 protein_coding retained_intron MGP_CBAJ_T0070488.1 MGP_CBAJ_G0029089.1 mouse_genomes_project 5 31678469 31680217 - MGP_CBAJ_P0070488 Fndc4 protein_coding protein_coding MGP_CBAJ_T0070489.1 MGP_CBAJ_G0029089.1 mouse_genomes_project 5 31678869 31680043 - Fndc4 protein_coding retained_intron MGP_CBAJ_T0070490.1 MGP_CBAJ_G0029089.1 mouse_genomes_project 5 31679498 31680864 - MGP_CBAJ_P0070490 Fndc4 protein_coding protein_coding MGP_CBAJ_T0070190.1 MGP_CBAJ_G0029041.1 mouse_genomes_project 5 29547588 29577407 + MGP_CBAJ_P0070190 Nom1 protein_coding protein_coding MGP_CBAJ_T0070191.1 MGP_CBAJ_G0029041.1 mouse_genomes_project 5 29557816 29564882 + Nom1 protein_coding retained_intron MGP_CBAJ_T0071085.1 MGP_CBAJ_G0029185.1 mouse_genomes_project 5 43431638 43434657 - MGP_CBAJ_P0071085 Nkx3-2 protein_coding protein_coding MGP_CBAJ_T0101124.1 MGP_CBAJ_G0039319.1 mouse_genomes_project 5 23334961 23335505 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0014705.1 MGP_CBAJ_G0012817.1 mouse_genomes_project 5 29866373 29866752 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001715.1 MGP_CBAJ_G0001633.1 mouse_genomes_project 5 119080620 119083893 - TEC TEC MGP_CBAJ_T0073210.1 MGP_CBAJ_G0029614.1 mouse_genomes_project 5 126909608 126928597 + MGP_CBAJ_P0073210 Oasl2 protein_coding protein_coding MGP_CBAJ_T0073211.1 MGP_CBAJ_G0029614.1 mouse_genomes_project 5 126909673 126912274 + MGP_CBAJ_P0073211 Oasl2 protein_coding protein_coding MGP_CBAJ_T0073212.1 MGP_CBAJ_G0029614.1 mouse_genomes_project 5 126909702 126912399 + MGP_CBAJ_P0073212 Oasl2 protein_coding protein_coding MGP_CBAJ_T0073213.1 MGP_CBAJ_G0029614.1 mouse_genomes_project 5 126910204 126911023 + Oasl2 protein_coding retained_intron MGP_CBAJ_T0073214.1 MGP_CBAJ_G0029614.1 mouse_genomes_project 5 126910248 126912711 + Oasl2 protein_coding retained_intron MGP_CBAJ_T0073215.1 MGP_CBAJ_G0029614.1 mouse_genomes_project 5 126910414 126928589 + MGP_CBAJ_P0073215 Oasl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073216.1 MGP_CBAJ_G0029614.1 mouse_genomes_project 5 126913800 126927583 + MGP_CBAJ_P0073216 Oasl2 protein_coding protein_coding MGP_CBAJ_T0073217.1 MGP_CBAJ_G0029614.1 mouse_genomes_project 5 126914281 126916395 + Oasl2 protein_coding retained_intron MGP_CBAJ_T0073218.1 MGP_CBAJ_G0029614.1 mouse_genomes_project 5 126916883 126922326 + Oasl2 protein_coding retained_intron MGP_CBAJ_T0098425.1 MGP_CBAJ_G0036690.1 mouse_genomes_project 5 160081745 160082327 - Gm43378 sense_intronic sense_intronic MGP_CBAJ_T0001447.1 MGP_CBAJ_G0001370.1 mouse_genomes_project 5 29365213 29369509 - TEC TEC MGP_CBAJ_T0007937.1 MGP_CBAJ_G0006474.1 mouse_genomes_project 5 3133633 3136840 + lincRNA lincRNA MGP_CBAJ_T0074069.1 MGP_CBAJ_G0029764.1 mouse_genomes_project 5 138605139 138614015 - MGP_CBAJ_P0074069 Eif2b1 protein_coding protein_coding MGP_CBAJ_T0074070.1 MGP_CBAJ_G0029764.1 mouse_genomes_project 5 138606677 138609843 - Eif2b1 protein_coding retained_intron MGP_CBAJ_T0074071.1 MGP_CBAJ_G0029764.1 mouse_genomes_project 5 138608007 138613945 - MGP_CBAJ_P0074071 Eif2b1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074072.1 MGP_CBAJ_G0029764.1 mouse_genomes_project 5 138608657 138613959 - MGP_CBAJ_P0074072 Eif2b1 protein_coding protein_coding MGP_CBAJ_T0074073.1 MGP_CBAJ_G0029764.1 mouse_genomes_project 5 138611726 138613876 - MGP_CBAJ_P0074073 Eif2b1 protein_coding protein_coding MGP_CBAJ_T0074074.1 MGP_CBAJ_G0029764.1 mouse_genomes_project 5 138613402 138613916 - MGP_CBAJ_P0074074 Eif2b1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0004702.1 MGP_CBAJ_G0004055.1 mouse_genomes_project 5 126741564 126742811 - 4930515G01Rik antisense antisense MGP_CBAJ_T0075345.1 MGP_CBAJ_G0030013.1 mouse_genomes_project 5 161347102 161351252 + MGP_CBAJ_P0075345 Bhlha15 protein_coding protein_coding MGP_CBAJ_T0072554.1 MGP_CBAJ_G0029481.1 mouse_genomes_project 5 114134554 114147549 + MGP_CBAJ_P0072554 Ibsp protein_coding protein_coding MGP_CBAJ_T0074610.1 MGP_CBAJ_G0029861.1 mouse_genomes_project 5 151568528 151576488 + MGP_CBAJ_P0074610 Upk3b protein_coding protein_coding MGP_CBAJ_T0001433.1 MGP_CBAJ_G0001357.1 mouse_genomes_project 5 21213633 21215530 - TEC TEC MGP_CBAJ_T0073484.1 MGP_CBAJ_G0029664.1 mouse_genomes_project 5 133423599 133432989 + MGP_CBAJ_P0073484 Lhx5 protein_coding protein_coding MGP_CBAJ_T0073548.1 MGP_CBAJ_G0029684.1 mouse_genomes_project 5 134153577 134236015 - MGP_CBAJ_P0073548 Rph3a protein_coding protein_coding MGP_CBAJ_T0073549.1 MGP_CBAJ_G0029684.1 mouse_genomes_project 5 134153577 134235473 - MGP_CBAJ_P0073549 Rph3a protein_coding protein_coding MGP_CBAJ_T0073550.1 MGP_CBAJ_G0029684.1 mouse_genomes_project 5 134154921 134234479 - MGP_CBAJ_P0073550 Rph3a protein_coding protein_coding MGP_CBAJ_T0073551.1 MGP_CBAJ_G0029684.1 mouse_genomes_project 5 134186460 134236027 - MGP_CBAJ_P0073551 Rph3a protein_coding protein_coding MGP_CBAJ_T0014981.1 MGP_CBAJ_G0013093.1 mouse_genomes_project 5 163595233 163595434 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0071556.1 MGP_CBAJ_G0029262.1 mouse_genomes_project 5 72052920 72078153 + MGP_CBAJ_P0071556 Tmem33 protein_coding protein_coding MGP_CBAJ_T0071557.1 MGP_CBAJ_G0029262.1 mouse_genomes_project 5 72053006 72056971 + MGP_CBAJ_P0071557 Tmem33 protein_coding protein_coding MGP_CBAJ_T0071558.1 MGP_CBAJ_G0029262.1 mouse_genomes_project 5 72053051 72060912 + MGP_CBAJ_P0071558 Tmem33 protein_coding protein_coding MGP_CBAJ_T0071559.1 MGP_CBAJ_G0029262.1 mouse_genomes_project 5 72053051 72073351 + MGP_CBAJ_P0071559 Tmem33 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071560.1 MGP_CBAJ_G0029262.1 mouse_genomes_project 5 72053052 72078153 + MGP_CBAJ_P0071560 Tmem33 protein_coding protein_coding MGP_CBAJ_T0071561.1 MGP_CBAJ_G0029262.1 mouse_genomes_project 5 72053059 72056638 + MGP_CBAJ_P0071561 Tmem33 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071562.1 MGP_CBAJ_G0029262.1 mouse_genomes_project 5 72053109 72055432 + Tmem33 protein_coding retained_intron MGP_CBAJ_T0071563.1 MGP_CBAJ_G0029262.1 mouse_genomes_project 5 72053160 72078153 + MGP_CBAJ_P0071563 Tmem33 protein_coding protein_coding MGP_CBAJ_T0071564.1 MGP_CBAJ_G0029262.1 mouse_genomes_project 5 72053251 72061350 + Tmem33 protein_coding retained_intron MGP_CBAJ_T0099344.1 MGP_CBAJ_G0037599.1 mouse_genomes_project 5 35436686 35436791 + Gm22847 snRNA snRNA MGP_CBAJ_T0070701.1 MGP_CBAJ_G0029123.1 mouse_genomes_project 5 34799688 34801279 + MGP_CBAJ_P0070701 Gm1673 protein_coding protein_coding MGP_CBAJ_T0070702.1 MGP_CBAJ_G0029123.1 mouse_genomes_project 5 34799692 34801275 + Gm1673 protein_coding retained_intron MGP_CBAJ_T0070703.1 MGP_CBAJ_G0029123.1 mouse_genomes_project 5 34799725 34801275 + MGP_CBAJ_P0070703 Gm1673 protein_coding protein_coding MGP_CBAJ_T0070704.1 MGP_CBAJ_G0029123.1 mouse_genomes_project 5 34799729 34801272 + MGP_CBAJ_P0070704 Gm1673 protein_coding protein_coding MGP_CBAJ_T0070705.1 MGP_CBAJ_G0029123.1 mouse_genomes_project 5 34799765 34801276 + MGP_CBAJ_P0070705 Gm1673 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070706.1 MGP_CBAJ_G0029123.1 mouse_genomes_project 5 34799789 34801275 + MGP_CBAJ_P0070706 Gm1673 protein_coding protein_coding MGP_CBAJ_T0008073.1 MGP_CBAJ_G0006572.1 mouse_genomes_project 5 81635948 81639668 - Gm28865 lincRNA lincRNA MGP_CBAJ_T0072187.1 MGP_CBAJ_G0029403.1 mouse_genomes_project 5 99069711 99084677 + MGP_CBAJ_P0072187 Epgn protein_coding protein_coding MGP_CBAJ_T0072188.1 MGP_CBAJ_G0029403.1 mouse_genomes_project 5 99069711 99085679 + MGP_CBAJ_P0072188 Epgn protein_coding protein_coding MGP_CBAJ_T0071382.1 MGP_CBAJ_G0029237.1 mouse_genomes_project 5 69370496 69379620 - MGP_CBAJ_P0071382 Tlr1 protein_coding protein_coding MGP_CBAJ_T0071383.1 MGP_CBAJ_G0029237.1 mouse_genomes_project 5 69370497 69378811 - MGP_CBAJ_P0071383 Tlr1 protein_coding protein_coding MGP_CBAJ_T0071384.1 MGP_CBAJ_G0029237.1 mouse_genomes_project 5 69379013 69379622 - Tlr1 protein_coding processed_transcript MGP_CBAJ_T0010579.1 MGP_CBAJ_G0008717.1 mouse_genomes_project 5 122383500 122383609 + Mir701 miRNA miRNA MGP_CBAJ_T0001547.1 MGP_CBAJ_G0001467.1 mouse_genomes_project 5 54147913 54149467 - TEC TEC MGP_CBAJ_T0070159.1 MGP_CBAJ_G0029036.1 mouse_genomes_project 5 28214513 28259298 - MGP_CBAJ_P0070159 protein_coding protein_coding MGP_CBAJ_T0070160.1 MGP_CBAJ_G0029036.1 mouse_genomes_project 5 28216143 28223647 - MGP_CBAJ_P0070160 protein_coding protein_coding MGP_CBAJ_T0070161.1 MGP_CBAJ_G0029036.1 mouse_genomes_project 5 28219154 28251377 - MGP_CBAJ_P0070161 protein_coding protein_coding MGP_CBAJ_T0070162.1 MGP_CBAJ_G0029036.1 mouse_genomes_project 5 28219462 28223793 - MGP_CBAJ_P0070162 protein_coding protein_coding MGP_CBAJ_T0070163.1 MGP_CBAJ_G0029036.1 mouse_genomes_project 5 28222869 28223988 - MGP_CBAJ_P0070163 protein_coding protein_coding MGP_CBAJ_T0071905.1 MGP_CBAJ_G0029326.1 mouse_genomes_project 5 83323160 83342687 - MGP_CBAJ_P0071905 Noa1 protein_coding protein_coding MGP_CBAJ_T0071906.1 MGP_CBAJ_G0029326.1 mouse_genomes_project 5 83334525 83335410 - Noa1 protein_coding processed_transcript MGP_CBAJ_T0071907.1 MGP_CBAJ_G0029326.1 mouse_genomes_project 5 83336230 83342662 - Noa1 protein_coding retained_intron MGP_CBAJ_T0071908.1 MGP_CBAJ_G0029326.1 mouse_genomes_project 5 83338209 83340246 - Noa1 protein_coding processed_transcript MGP_CBAJ_T0074617.1 MGP_CBAJ_G0029863.1 mouse_genomes_project 5 151632671 151677227 + MGP_CBAJ_P0074617 Rasa4 protein_coding protein_coding MGP_CBAJ_T0074618.1 MGP_CBAJ_G0029863.1 mouse_genomes_project 5 151632709 151677227 + Rasa4 protein_coding retained_intron MGP_CBAJ_T0074619.1 MGP_CBAJ_G0029863.1 mouse_genomes_project 5 151632753 151677222 + Rasa4 protein_coding retained_intron MGP_CBAJ_T0074620.1 MGP_CBAJ_G0029863.1 mouse_genomes_project 5 151632753 151675324 + Rasa4 protein_coding retained_intron MGP_CBAJ_T0074621.1 MGP_CBAJ_G0029863.1 mouse_genomes_project 5 151632754 151649277 + Rasa4 protein_coding retained_intron MGP_CBAJ_T0074622.1 MGP_CBAJ_G0029863.1 mouse_genomes_project 5 151632773 151677222 + Rasa4 protein_coding retained_intron MGP_CBAJ_T0074623.1 MGP_CBAJ_G0029863.1 mouse_genomes_project 5 151632787 151677227 + MGP_CBAJ_P0074623 Rasa4 protein_coding protein_coding MGP_CBAJ_T0074624.1 MGP_CBAJ_G0029863.1 mouse_genomes_project 5 151632844 151672874 + Rasa4 protein_coding retained_intron MGP_CBAJ_T0074625.1 MGP_CBAJ_G0029863.1 mouse_genomes_project 5 151633825 151647094 + Rasa4 protein_coding processed_transcript MGP_CBAJ_T0074626.1 MGP_CBAJ_G0029863.1 mouse_genomes_project 5 151646931 151648401 + Rasa4 protein_coding retained_intron MGP_CBAJ_T0074627.1 MGP_CBAJ_G0029863.1 mouse_genomes_project 5 151651416 151667658 + MGP_CBAJ_P0074627 Rasa4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074628.1 MGP_CBAJ_G0029863.1 mouse_genomes_project 5 151669256 151671396 + MGP_CBAJ_P0074628 Rasa4 protein_coding protein_coding MGP_CBAJ_T0074629.1 MGP_CBAJ_G0029863.1 mouse_genomes_project 5 151676298 151676897 + Rasa4 protein_coding retained_intron MGP_CBAJ_T0015000.1 MGP_CBAJ_G0013112.1 mouse_genomes_project 5 169566611 169568467 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001523.1 MGP_CBAJ_G0001444.1 mouse_genomes_project 5 51167383 51169650 - TEC TEC MGP_CBAJ_T0001603.1 MGP_CBAJ_G0001522.1 mouse_genomes_project 5 70366616 70369049 + TEC TEC MGP_CBAJ_T0014764.1 MGP_CBAJ_G0012876.1 mouse_genomes_project 5 60770412 60771148 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0073288.1 MGP_CBAJ_G0029630.1 mouse_genomes_project 5 127472237 127474577 + MGP_CBAJ_P0073288 Triap1 protein_coding protein_coding MGP_CBAJ_T0072231.1 MGP_CBAJ_G0029415.1 mouse_genomes_project 5 100511111 100534558 - MGP_CBAJ_P0072231 Naaa protein_coding protein_coding MGP_CBAJ_T0072232.1 MGP_CBAJ_G0029415.1 mouse_genomes_project 5 100511116 100519294 - Naaa protein_coding retained_intron MGP_CBAJ_T0072233.1 MGP_CBAJ_G0029415.1 mouse_genomes_project 5 100514995 100534553 - MGP_CBAJ_P0072233 Naaa protein_coding protein_coding MGP_CBAJ_T0072234.1 MGP_CBAJ_G0029415.1 mouse_genomes_project 5 100516106 100529090 - MGP_CBAJ_P0072234 Naaa protein_coding protein_coding MGP_CBAJ_T0072235.1 MGP_CBAJ_G0029415.1 mouse_genomes_project 5 100532204 100534553 - Naaa protein_coding retained_intron MGP_CBAJ_T0010580.1 MGP_CBAJ_G0008718.1 mouse_genomes_project 5 125061048 125061101 - Mir7229 miRNA miRNA MGP_CBAJ_T0075267.1 MGP_CBAJ_G0029996.1 mouse_genomes_project 5 160420507 160433290 - MGP_CBAJ_P0075267 Zdhhc4 protein_coding protein_coding MGP_CBAJ_T0075268.1 MGP_CBAJ_G0029996.1 mouse_genomes_project 5 160420508 160433254 - MGP_CBAJ_P0075268 Zdhhc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075269.1 MGP_CBAJ_G0029996.1 mouse_genomes_project 5 160420515 160430379 - MGP_CBAJ_P0075269 Zdhhc4 protein_coding protein_coding MGP_CBAJ_T0075270.1 MGP_CBAJ_G0029996.1 mouse_genomes_project 5 160424410 160433245 - Zdhhc4 protein_coding processed_transcript MGP_CBAJ_T0075271.1 MGP_CBAJ_G0029996.1 mouse_genomes_project 5 160424465 160433257 - MGP_CBAJ_P0075271 Zdhhc4 protein_coding protein_coding MGP_CBAJ_T0075272.1 MGP_CBAJ_G0029996.1 mouse_genomes_project 5 160424471 160433248 - MGP_CBAJ_P0075272 Zdhhc4 protein_coding protein_coding MGP_CBAJ_T0075273.1 MGP_CBAJ_G0029996.1 mouse_genomes_project 5 160428157 160433263 - MGP_CBAJ_P0075273 Zdhhc4 protein_coding protein_coding MGP_CBAJ_T0075274.1 MGP_CBAJ_G0029996.1 mouse_genomes_project 5 160428244 160433263 - Zdhhc4 protein_coding processed_transcript MGP_CBAJ_T0075275.1 MGP_CBAJ_G0029996.1 mouse_genomes_project 5 160428259 160433262 - MGP_CBAJ_P0075275 Zdhhc4 protein_coding protein_coding MGP_CBAJ_T0075276.1 MGP_CBAJ_G0029996.1 mouse_genomes_project 5 160428357 160432603 - Zdhhc4 protein_coding retained_intron MGP_CBAJ_T0075277.1 MGP_CBAJ_G0029996.1 mouse_genomes_project 5 160430017 160433223 - Zdhhc4 protein_coding processed_transcript MGP_CBAJ_T0075278.1 MGP_CBAJ_G0029996.1 mouse_genomes_project 5 160430080 160433226 - Zdhhc4 protein_coding processed_transcript MGP_CBAJ_T0075279.1 MGP_CBAJ_G0029996.1 mouse_genomes_project 5 160432328 160433236 - Zdhhc4 protein_coding processed_transcript MGP_CBAJ_T0070137.1 MGP_CBAJ_G0029029.1 mouse_genomes_project 5 26706517 26744340 + Dpp6 protein_coding processed_transcript MGP_CBAJ_T0070138.1 MGP_CBAJ_G0029029.1 mouse_genomes_project 5 26706671 27676458 + MGP_CBAJ_P0070138 Dpp6 protein_coding protein_coding MGP_CBAJ_T0070139.1 MGP_CBAJ_G0029029.1 mouse_genomes_project 5 26706748 27402021 + Dpp6 protein_coding retained_intron MGP_CBAJ_T0070140.1 MGP_CBAJ_G0029029.1 mouse_genomes_project 5 26800308 27677502 + MGP_CBAJ_P0070140 Dpp6 protein_coding protein_coding MGP_CBAJ_T0070141.1 MGP_CBAJ_G0029029.1 mouse_genomes_project 5 26956435 27677498 + MGP_CBAJ_P0070141 Dpp6 protein_coding protein_coding MGP_CBAJ_T0070142.1 MGP_CBAJ_G0029029.1 mouse_genomes_project 5 26956629 26959367 + Dpp6 protein_coding retained_intron MGP_CBAJ_T0070143.1 MGP_CBAJ_G0029029.1 mouse_genomes_project 5 27187094 27677497 + MGP_CBAJ_P0070143 Dpp6 protein_coding protein_coding MGP_CBAJ_T0070144.1 MGP_CBAJ_G0029029.1 mouse_genomes_project 5 27187094 27326343 + MGP_CBAJ_P0070144 Dpp6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070147.1 MGP_CBAJ_G0029029.1 mouse_genomes_project 5 27482593 27647137 + Dpp6 protein_coding retained_intron MGP_CBAJ_T0001749.1 MGP_CBAJ_G0001667.1 mouse_genomes_project 5 130616856 130617778 - TEC TEC MGP_CBAJ_T0070130.1 MGP_CBAJ_G0029026.1 mouse_genomes_project 5 25287167 25289128 + MGP_CBAJ_P0070130 Cct8l1 protein_coding protein_coding MGP_CBAJ_T0001799.1 MGP_CBAJ_G0001716.1 mouse_genomes_project 5 143081797 143083169 - TEC TEC MGP_CBAJ_T0099335.1 MGP_CBAJ_G0037590.1 mouse_genomes_project 5 21937025 21937090 - Gm24512 snRNA snRNA MGP_CBAJ_T0075078.1 MGP_CBAJ_G0029952.1 mouse_genomes_project 5 155897214 155901864 + MGP_CBAJ_P0075078 Gper1 protein_coding protein_coding MGP_CBAJ_T0075079.1 MGP_CBAJ_G0029952.1 mouse_genomes_project 5 155897343 155899953 + Gper1 protein_coding processed_transcript MGP_CBAJ_T0071373.1 MGP_CBAJ_G0029236.1 mouse_genomes_project 5 69225028 69256657 + MGP_CBAJ_P0071373 Klf3 protein_coding protein_coding MGP_CBAJ_T0071374.1 MGP_CBAJ_G0029236.1 mouse_genomes_project 5 69225217 69244718 + Klf3 protein_coding retained_intron MGP_CBAJ_T0071375.1 MGP_CBAJ_G0029236.1 mouse_genomes_project 5 69225262 69243781 + Klf3 protein_coding processed_transcript MGP_CBAJ_T0071376.1 MGP_CBAJ_G0029236.1 mouse_genomes_project 5 69233984 69253286 + MGP_CBAJ_P0071376 Klf3 protein_coding protein_coding MGP_CBAJ_T0071377.1 MGP_CBAJ_G0029236.1 mouse_genomes_project 5 69233985 69240944 + Klf3 protein_coding retained_intron MGP_CBAJ_T0071378.1 MGP_CBAJ_G0029236.1 mouse_genomes_project 5 69234029 69243852 + MGP_CBAJ_P0071378 Klf3 protein_coding protein_coding MGP_CBAJ_T0071379.1 MGP_CBAJ_G0029236.1 mouse_genomes_project 5 69237494 69247031 + Klf3 protein_coding retained_intron MGP_CBAJ_T0071380.1 MGP_CBAJ_G0029236.1 mouse_genomes_project 5 69243956 69250971 + MGP_CBAJ_P0071380 Klf3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071381.1 MGP_CBAJ_G0029236.1 mouse_genomes_project 5 69250610 69253354 + MGP_CBAJ_P0071381 Klf3 protein_coding protein_coding MGP_CBAJ_T0073837.1 MGP_CBAJ_G0029727.1 mouse_genomes_project 5 136842453 136873298 - MGP_CBAJ_P0073837 Rhof protein_coding nonsense_mediated_decay MGP_CBAJ_T0073838.1 MGP_CBAJ_G0029727.1 mouse_genomes_project 5 136842453 136873233 - MGP_CBAJ_P0073838 Rhof protein_coding protein_coding MGP_CBAJ_T0073839.1 MGP_CBAJ_G0029727.1 mouse_genomes_project 5 136850577 136873266 - Rhof protein_coding processed_transcript MGP_CBAJ_T0073840.1 MGP_CBAJ_G0029727.1 mouse_genomes_project 5 136859243 136873529 - MGP_CBAJ_P0073840 Rhof protein_coding protein_coding MGP_CBAJ_T0099338.1 MGP_CBAJ_G0037593.1 mouse_genomes_project 5 25278452 25278623 + Gm22656 snRNA snRNA MGP_CBAJ_T0001545.1 MGP_CBAJ_G0001465.1 mouse_genomes_project 5 52567580 52570147 + TEC TEC MGP_CBAJ_T0069800.1 MGP_CBAJ_G0028959.1 mouse_genomes_project 5 12341080 12592944 + Sema3e protein_coding retained_intron MGP_CBAJ_T0069801.1 MGP_CBAJ_G0028959.1 mouse_genomes_project 5 12341080 12595319 + MGP_CBAJ_P0069801 Sema3e protein_coding protein_coding MGP_CBAJ_T0069802.1 MGP_CBAJ_G0028959.1 mouse_genomes_project 5 12566814 12568664 + Sema3e protein_coding retained_intron MGP_CBAJ_T0071601.1 MGP_CBAJ_G0029271.1 mouse_genomes_project 5 74572232 74593494 - MGP_CBAJ_P0071601 Yipf7 protein_coding protein_coding MGP_CBAJ_T0071602.1 MGP_CBAJ_G0029271.1 mouse_genomes_project 5 74574871 74593435 - MGP_CBAJ_P0071602 Yipf7 protein_coding protein_coding MGP_CBAJ_T0014853.1 MGP_CBAJ_G0012965.1 mouse_genomes_project 5 100633364 100638754 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0071967.1 MGP_CBAJ_G0029333.1 mouse_genomes_project 5 93377075 93419162 + MGP_CBAJ_P0071967 Stap1 protein_coding protein_coding MGP_CBAJ_T0071968.1 MGP_CBAJ_G0029333.1 mouse_genomes_project 5 93377079 93407848 + Stap1 protein_coding retained_intron MGP_CBAJ_T0071969.1 MGP_CBAJ_G0029333.1 mouse_genomes_project 5 93377103 93395638 + Stap1 protein_coding retained_intron MGP_CBAJ_T0071970.1 MGP_CBAJ_G0029333.1 mouse_genomes_project 5 93377112 93395634 + Stap1 protein_coding retained_intron MGP_CBAJ_T0071971.1 MGP_CBAJ_G0029333.1 mouse_genomes_project 5 93377141 93417028 + MGP_CBAJ_P0071971 Stap1 protein_coding protein_coding MGP_CBAJ_T0071972.1 MGP_CBAJ_G0029333.1 mouse_genomes_project 5 93396095 93404910 + Stap1 protein_coding retained_intron MGP_CBAJ_T0001498.1 MGP_CBAJ_G0001419.1 mouse_genomes_project 5 46447026 46447929 - TEC TEC MGP_CBAJ_T0074190.1 MGP_CBAJ_G0029787.1 mouse_genomes_project 5 143548201 143553280 + MGP_CBAJ_P0074190 Ran protein_coding protein_coding MGP_CBAJ_T0074191.1 MGP_CBAJ_G0029787.1 mouse_genomes_project 5 143548334 143548921 + Ran protein_coding processed_transcript MGP_CBAJ_T0074192.1 MGP_CBAJ_G0029787.1 mouse_genomes_project 5 143548404 143553280 + MGP_CBAJ_P0074192 Ran protein_coding protein_coding MGP_CBAJ_T0007944.1 MGP_CBAJ_G0006480.1 mouse_genomes_project 5 14386418 14398823 - Gm3510 lincRNA lincRNA MGP_CBAJ_T0014919.1 MGP_CBAJ_G0013031.1 mouse_genomes_project 5 128997277 128997947 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014793.1 MGP_CBAJ_G0012905.1 mouse_genomes_project 5 71036333 71036601 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0072867.1 MGP_CBAJ_G0029548.1 mouse_genomes_project 5 121581591 121646353 + MGP_CBAJ_P0072867 Pole protein_coding protein_coding MGP_CBAJ_T0072868.1 MGP_CBAJ_G0029548.1 mouse_genomes_project 5 121581626 121592856 + MGP_CBAJ_P0072868 Pole protein_coding protein_coding MGP_CBAJ_T0072869.1 MGP_CBAJ_G0029548.1 mouse_genomes_project 5 121581662 121612481 + Pole protein_coding retained_intron MGP_CBAJ_T0072870.1 MGP_CBAJ_G0029548.1 mouse_genomes_project 5 121623929 121626070 + Pole protein_coding retained_intron MGP_CBAJ_T0072871.1 MGP_CBAJ_G0029548.1 mouse_genomes_project 5 121634531 121646330 + Pole protein_coding retained_intron MGP_CBAJ_T0072872.1 MGP_CBAJ_G0029548.1 mouse_genomes_project 5 121639644 121646332 + MGP_CBAJ_P0072872 Pole protein_coding protein_coding MGP_CBAJ_T0072873.1 MGP_CBAJ_G0029548.1 mouse_genomes_project 5 121642321 121646315 + Pole protein_coding retained_intron MGP_CBAJ_T0001684.1 MGP_CBAJ_G0001602.1 mouse_genomes_project 5 105869372 105869918 - TEC TEC MGP_CBAJ_T0001841.1 MGP_CBAJ_G0001757.1 mouse_genomes_project 5 149772459 149773924 - TEC TEC MGP_CBAJ_T0072807.1 MGP_CBAJ_G0029532.1 mouse_genomes_project 5 119345468 119433891 - MGP_CBAJ_P0072807 protein_coding protein_coding MGP_CBAJ_T0099405.1 MGP_CBAJ_G0037660.1 mouse_genomes_project 5 155927228 155927335 + Gm26285 snRNA snRNA MGP_CBAJ_T0098210.1 MGP_CBAJ_G0036483.1 mouse_genomes_project 5 100728687 100728828 + Gm26039 scaRNA scaRNA MGP_CBAJ_T0004660.1 MGP_CBAJ_G0004027.1 mouse_genomes_project 5 108942100 108985031 + Gm16226 antisense antisense MGP_CBAJ_T0004661.1 MGP_CBAJ_G0004027.1 mouse_genomes_project 5 108942100 108949994 + Gm16226 antisense antisense MGP_CBAJ_T0004662.1 MGP_CBAJ_G0004027.1 mouse_genomes_project 5 108942105 108985033 + Gm16226 antisense antisense MGP_CBAJ_T0004663.1 MGP_CBAJ_G0004027.1 mouse_genomes_project 5 108942129 108985029 + Gm16226 antisense antisense MGP_CBAJ_T0001686.1 MGP_CBAJ_G0001604.1 mouse_genomes_project 5 105905680 105906165 + TEC TEC MGP_CBAJ_T0014717.1 MGP_CBAJ_G0012829.1 mouse_genomes_project 5 33799682 33800213 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0070905.1 MGP_CBAJ_G0029152.1 mouse_genomes_project 5 36956382 37089101 + MGP_CBAJ_P0070905 Afap1 protein_coding protein_coding MGP_CBAJ_T0070906.1 MGP_CBAJ_G0029152.1 mouse_genomes_project 5 36956528 36968133 + Afap1 protein_coding processed_transcript MGP_CBAJ_T0070907.1 MGP_CBAJ_G0029152.1 mouse_genomes_project 5 36975546 37081217 + MGP_CBAJ_P0070907 Afap1 protein_coding protein_coding MGP_CBAJ_T0070908.1 MGP_CBAJ_G0029152.1 mouse_genomes_project 5 36995718 37089058 + MGP_CBAJ_P0070908 Afap1 protein_coding unknown_likely_coding MGP_CBAJ_T0070909.1 MGP_CBAJ_G0029152.1 mouse_genomes_project 5 37064193 37068411 + Afap1 protein_coding retained_intron MGP_CBAJ_T0001862.1 MGP_CBAJ_G0001778.1 mouse_genomes_project 5 160935012 160941541 + TEC TEC MGP_CBAJ_T0014983.1 MGP_CBAJ_G0013095.1 mouse_genomes_project 5 163864155 163864629 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0073629.1 MGP_CBAJ_G0029700.1 mouse_genomes_project 5 135151247 135201993 + Atxn2 protein_coding processed_transcript MGP_CBAJ_T0073630.1 MGP_CBAJ_G0029700.1 mouse_genomes_project 5 135155086 135288248 + MGP_CBAJ_P0073630 Atxn2 protein_coding protein_coding MGP_CBAJ_T0073631.1 MGP_CBAJ_G0029700.1 mouse_genomes_project 5 135156267 135236826 + Atxn2 protein_coding processed_transcript MGP_CBAJ_T0073632.1 MGP_CBAJ_G0029700.1 mouse_genomes_project 5 135202005 135288247 + MGP_CBAJ_P0073632 Atxn2 protein_coding protein_coding MGP_CBAJ_T0073633.1 MGP_CBAJ_G0029700.1 mouse_genomes_project 5 135241967 135262990 + MGP_CBAJ_P0073633 Atxn2 protein_coding protein_coding MGP_CBAJ_T0073634.1 MGP_CBAJ_G0029700.1 mouse_genomes_project 5 135246267 135251309 + Atxn2 protein_coding retained_intron MGP_CBAJ_T0073635.1 MGP_CBAJ_G0029700.1 mouse_genomes_project 5 135251893 135288018 + MGP_CBAJ_P0073635 Atxn2 protein_coding protein_coding MGP_CBAJ_T0073636.1 MGP_CBAJ_G0029700.1 mouse_genomes_project 5 135253060 135263401 + Atxn2 protein_coding retained_intron MGP_CBAJ_T0073637.1 MGP_CBAJ_G0029700.1 mouse_genomes_project 5 135265337 135276733 + Atxn2 protein_coding retained_intron MGP_CBAJ_T0073638.1 MGP_CBAJ_G0029700.1 mouse_genomes_project 5 135272051 135275563 + Atxn2 protein_coding processed_transcript MGP_CBAJ_T0073639.1 MGP_CBAJ_G0029700.1 mouse_genomes_project 5 135275043 135284249 + Atxn2 protein_coding retained_intron MGP_CBAJ_T0073640.1 MGP_CBAJ_G0029700.1 mouse_genomes_project 5 135275408 135282354 + Atxn2 protein_coding retained_intron MGP_CBAJ_T0073641.1 MGP_CBAJ_G0029700.1 mouse_genomes_project 5 135275527 135287929 + MGP_CBAJ_P0073641 Atxn2 protein_coding protein_coding MGP_CBAJ_T0073642.1 MGP_CBAJ_G0029700.1 mouse_genomes_project 5 135278876 135288032 + Atxn2 protein_coding retained_intron MGP_CBAJ_T0073643.1 MGP_CBAJ_G0029700.1 mouse_genomes_project 5 135279542 135286753 + MGP_CBAJ_P0073643 Atxn2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073644.1 MGP_CBAJ_G0029700.1 mouse_genomes_project 5 135283961 135284831 + Atxn2 protein_coding retained_intron MGP_CBAJ_T0073645.1 MGP_CBAJ_G0029700.1 mouse_genomes_project 5 135284262 135285228 + Atxn2 protein_coding retained_intron MGP_CBAJ_T0073646.1 MGP_CBAJ_G0029700.1 mouse_genomes_project 5 135284757 135289791 + MGP_CBAJ_P0073646 Atxn2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073647.1 MGP_CBAJ_G0029700.1 mouse_genomes_project 5 135284804 135288196 + MGP_CBAJ_P0073647 Atxn2 protein_coding protein_coding MGP_CBAJ_T0017957.1 MGP_CBAJ_G0015362.1 mouse_genomes_project 5 168302491 168310164 + Gm43451 processed_transcript lincRNA MGP_CBAJ_T0017958.1 MGP_CBAJ_G0015362.1 mouse_genomes_project 5 168309546 168310409 + Gm43451 processed_transcript retained_intron MGP_CBAJ_T0101950.1 MGP_CBAJ_G0039981.1 mouse_genomes_project 5 120269589 120277629 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0014838.1 MGP_CBAJ_G0012950.1 mouse_genomes_project 5 95831526 95831881 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0070505.1 MGP_CBAJ_G0029093.1 mouse_genomes_project 5 31968779 31990314 + MGP_CBAJ_P0070505 Gpn1 protein_coding protein_coding MGP_CBAJ_T0070506.1 MGP_CBAJ_G0029093.1 mouse_genomes_project 5 31968790 31977055 + Gpn1 protein_coding retained_intron MGP_CBAJ_T0070507.1 MGP_CBAJ_G0029093.1 mouse_genomes_project 5 31968791 31971755 + MGP_CBAJ_P0070507 Gpn1 protein_coding protein_coding MGP_CBAJ_T0070508.1 MGP_CBAJ_G0029093.1 mouse_genomes_project 5 31968805 31973313 + MGP_CBAJ_P0070508 Gpn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070509.1 MGP_CBAJ_G0029093.1 mouse_genomes_project 5 31968832 31977561 + Gpn1 protein_coding retained_intron MGP_CBAJ_T0070510.1 MGP_CBAJ_G0029093.1 mouse_genomes_project 5 31969039 31971363 + Gpn1 protein_coding processed_transcript MGP_CBAJ_T0070511.1 MGP_CBAJ_G0029093.1 mouse_genomes_project 5 31981052 31984851 + Gpn1 protein_coding retained_intron MGP_CBAJ_T0008012.1 MGP_CBAJ_G0006521.1 mouse_genomes_project 5 44811835 44824084 - Gm43700 lincRNA lincRNA MGP_CBAJ_T0001512.1 MGP_CBAJ_G0001433.1 mouse_genomes_project 5 47955774 47956896 + TEC TEC MGP_CBAJ_T0074055.1 MGP_CBAJ_G0029761.1 mouse_genomes_project 5 138521408 138562049 - MGP_CBAJ_P0074055 Rilpl1 protein_coding protein_coding MGP_CBAJ_T0074056.1 MGP_CBAJ_G0029761.1 mouse_genomes_project 5 138521865 138532234 - MGP_CBAJ_P0074056 Rilpl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074057.1 MGP_CBAJ_G0029761.1 mouse_genomes_project 5 138521980 138542960 - MGP_CBAJ_P0074057 Rilpl1 protein_coding protein_coding MGP_CBAJ_T0074058.1 MGP_CBAJ_G0029761.1 mouse_genomes_project 5 138521992 138543044 - MGP_CBAJ_P0074058 Rilpl1 protein_coding protein_coding MGP_CBAJ_T0075366.1 MGP_CBAJ_G0030019.1 mouse_genomes_project 5 162042779 162043626 + Trrap protein_coding processed_transcript MGP_CBAJ_T0075367.1 MGP_CBAJ_G0030019.1 mouse_genomes_project 5 162043026 162062854 + Trrap protein_coding retained_intron MGP_CBAJ_T0075368.1 MGP_CBAJ_G0030019.1 mouse_genomes_project 5 162043153 162136731 + MGP_CBAJ_P0075368 Trrap protein_coding unknown_likely_coding MGP_CBAJ_T0075369.1 MGP_CBAJ_G0030019.1 mouse_genomes_project 5 162043478 162051982 + MGP_CBAJ_P0075369 Trrap protein_coding protein_coding MGP_CBAJ_T0075370.1 MGP_CBAJ_G0030019.1 mouse_genomes_project 5 162043728 162136724 + MGP_CBAJ_P0075370 Trrap protein_coding protein_coding MGP_CBAJ_T0075371.1 MGP_CBAJ_G0030019.1 mouse_genomes_project 5 162046023 162136722 + MGP_CBAJ_P0075371 Trrap protein_coding protein_coding MGP_CBAJ_T0075372.1 MGP_CBAJ_G0030019.1 mouse_genomes_project 5 162046023 162136697 + MGP_CBAJ_P0075372 Trrap protein_coding protein_coding MGP_CBAJ_T0075373.1 MGP_CBAJ_G0030019.1 mouse_genomes_project 5 162060479 162136722 + MGP_CBAJ_P0075373 Trrap protein_coding protein_coding MGP_CBAJ_T0075374.1 MGP_CBAJ_G0030019.1 mouse_genomes_project 5 162066343 162068536 + Trrap protein_coding retained_intron MGP_CBAJ_T0075375.1 MGP_CBAJ_G0030019.1 mouse_genomes_project 5 162079592 162109361 + Trrap protein_coding retained_intron MGP_CBAJ_T0075376.1 MGP_CBAJ_G0030019.1 mouse_genomes_project 5 162086893 162088645 + Trrap protein_coding retained_intron MGP_CBAJ_T0075377.1 MGP_CBAJ_G0030019.1 mouse_genomes_project 5 162094656 162097960 + Trrap protein_coding retained_intron MGP_CBAJ_T0075378.1 MGP_CBAJ_G0030019.1 mouse_genomes_project 5 162113831 162115291 + Trrap protein_coding retained_intron MGP_CBAJ_T0075379.1 MGP_CBAJ_G0030019.1 mouse_genomes_project 5 162132692 162136723 + Trrap protein_coding retained_intron MGP_CBAJ_T0072670.1 MGP_CBAJ_G0029508.1 mouse_genomes_project 5 117918288 117959645 - MGP_CBAJ_P0072670 Glmn protein_coding protein_coding MGP_CBAJ_T0072671.1 MGP_CBAJ_G0029508.1 mouse_genomes_project 5 117918290 117959583 - MGP_CBAJ_P0072671 Glmn protein_coding protein_coding MGP_CBAJ_T0072672.1 MGP_CBAJ_G0029508.1 mouse_genomes_project 5 117918343 117920467 - Glmn protein_coding retained_intron MGP_CBAJ_T0072673.1 MGP_CBAJ_G0029508.1 mouse_genomes_project 5 117918344 117959894 - MGP_CBAJ_P0072673 Glmn protein_coding protein_coding MGP_CBAJ_T0072674.1 MGP_CBAJ_G0029508.1 mouse_genomes_project 5 117918345 117959550 - MGP_CBAJ_P0072674 Glmn protein_coding nonsense_mediated_decay MGP_CBAJ_T0072675.1 MGP_CBAJ_G0029508.1 mouse_genomes_project 5 117943988 117959572 - Glmn protein_coding processed_transcript MGP_CBAJ_T0072676.1 MGP_CBAJ_G0029508.1 mouse_genomes_project 5 117946995 117959645 - Glmn protein_coding processed_transcript MGP_CBAJ_T0072677.1 MGP_CBAJ_G0029508.1 mouse_genomes_project 5 117947029 117959552 - MGP_CBAJ_P0072677 Glmn protein_coding protein_coding MGP_CBAJ_T0010617.1 MGP_CBAJ_G0008755.1 mouse_genomes_project 5 165134653 165134763 - Mir7k miRNA miRNA MGP_CBAJ_T0001635.1 MGP_CBAJ_G0001554.1 mouse_genomes_project 5 74211720 74212751 - TEC TEC MGP_CBAJ_T0014938.1 MGP_CBAJ_G0013050.1 mouse_genomes_project 5 149711541 149711751 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014880.1 MGP_CBAJ_G0012992.1 mouse_genomes_project 5 116574750 116575073 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008088.1 MGP_CBAJ_G0006583.1 mouse_genomes_project 5 92968332 92970310 + Gm43567 lincRNA lincRNA MGP_CBAJ_T0001520.1 MGP_CBAJ_G0001441.1 mouse_genomes_project 5 50871110 50873691 - TEC TEC MGP_CBAJ_T0004572.1 MGP_CBAJ_G0003957.1 mouse_genomes_project 5 31124035 31128671 - Gm15461 antisense antisense MGP_CBAJ_T0099384.1 MGP_CBAJ_G0037639.1 mouse_genomes_project 5 117628073 117628175 + Gm22557 snRNA snRNA MGP_CBAJ_T0001624.1 MGP_CBAJ_G0001543.1 mouse_genomes_project 5 71893271 71898241 + TEC TEC MGP_CBAJ_T0010595.1 MGP_CBAJ_G0008733.1 mouse_genomes_project 5 149693953 149694052 + Gm26340 miRNA miRNA MGP_CBAJ_T0070654.1 MGP_CBAJ_G0029118.1 mouse_genomes_project 5 34447503 34468923 + MGP_CBAJ_P0070654 Tacc3 protein_coding protein_coding MGP_CBAJ_T0070655.1 MGP_CBAJ_G0029118.1 mouse_genomes_project 5 34447503 34475742 + MGP_CBAJ_P0070655 Tacc3 protein_coding protein_coding MGP_CBAJ_T0070656.1 MGP_CBAJ_G0029118.1 mouse_genomes_project 5 34447929 34456332 + MGP_CBAJ_P0070656 Tacc3 protein_coding protein_coding MGP_CBAJ_T0070657.1 MGP_CBAJ_G0029118.1 mouse_genomes_project 5 34447961 34468920 + MGP_CBAJ_P0070657 Tacc3 protein_coding protein_coding MGP_CBAJ_T0070658.1 MGP_CBAJ_G0029118.1 mouse_genomes_project 5 34448009 34452065 + Tacc3 protein_coding retained_intron MGP_CBAJ_T0070659.1 MGP_CBAJ_G0029118.1 mouse_genomes_project 5 34461989 34468923 + MGP_CBAJ_P0070659 Tacc3 protein_coding protein_coding MGP_CBAJ_T0070660.1 MGP_CBAJ_G0029118.1 mouse_genomes_project 5 34462052 34475732 + MGP_CBAJ_P0070660 Tacc3 protein_coding protein_coding MGP_CBAJ_T0098067.1 MGP_CBAJ_G0036340.1 mouse_genomes_project 5 166896116 166896234 - n-R5s179 rRNA rRNA MGP_CBAJ_T0073230.1 MGP_CBAJ_G0029617.1 mouse_genomes_project 5 126975010 127008010 - MGP_CBAJ_P0073230 Hnf1a protein_coding protein_coding MGP_CBAJ_T0073231.1 MGP_CBAJ_G0029617.1 mouse_genomes_project 5 126976091 127007787 - MGP_CBAJ_P0073231 Hnf1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0073232.1 MGP_CBAJ_G0029617.1 mouse_genomes_project 5 126978611 127007787 - MGP_CBAJ_P0073232 Hnf1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0073233.1 MGP_CBAJ_G0029617.1 mouse_genomes_project 5 127005645 127008037 - Hnf1a protein_coding retained_intron MGP_CBAJ_T0001687.1 MGP_CBAJ_G0001605.1 mouse_genomes_project 5 106025305 106025933 + TEC TEC MGP_CBAJ_T0004764.1 MGP_CBAJ_G0004097.1 mouse_genomes_project 5 146575339 146589851 + 2810432F15Rik antisense antisense MGP_CBAJ_T0008280.1 MGP_CBAJ_G0006713.1 mouse_genomes_project 5 141331976 141349619 + 4933438B17Rik lincRNA lincRNA MGP_CBAJ_T0008281.1 MGP_CBAJ_G0006713.1 mouse_genomes_project 5 141335382 141393975 + 4933438B17Rik lincRNA lincRNA MGP_CBAJ_T0008282.1 MGP_CBAJ_G0006713.1 mouse_genomes_project 5 141335389 141349474 + 4933438B17Rik lincRNA lincRNA MGP_CBAJ_T0073110.1 MGP_CBAJ_G0029594.1 mouse_genomes_project 5 125952733 125956988 - MGP_CBAJ_P0073110 Alkbh2 protein_coding protein_coding MGP_CBAJ_T0073111.1 MGP_CBAJ_G0029594.1 mouse_genomes_project 5 125952742 125957028 - MGP_CBAJ_P0073111 Alkbh2 protein_coding protein_coding MGP_CBAJ_T0073112.1 MGP_CBAJ_G0029594.1 mouse_genomes_project 5 125956417 125956993 - MGP_CBAJ_P0073112 Alkbh2 protein_coding protein_coding MGP_CBAJ_T0070986.1 MGP_CBAJ_G0029167.1 mouse_genomes_project 5 38500097 38538462 - MGP_CBAJ_P0070986 Evc protein_coding protein_coding MGP_CBAJ_T0070987.1 MGP_CBAJ_G0029167.1 mouse_genomes_project 5 38500654 38508129 - MGP_CBAJ_P0070987 Evc protein_coding protein_coding MGP_CBAJ_T0070988.1 MGP_CBAJ_G0029167.1 mouse_genomes_project 5 38501371 38513262 - Evc protein_coding retained_intron MGP_CBAJ_T0070989.1 MGP_CBAJ_G0029167.1 mouse_genomes_project 5 38501416 38502546 - MGP_CBAJ_P0070989 Evc protein_coding protein_coding MGP_CBAJ_T0070990.1 MGP_CBAJ_G0029167.1 mouse_genomes_project 5 38514166 38538535 - MGP_CBAJ_P0070990 Evc protein_coding protein_coding MGP_CBAJ_T0070991.1 MGP_CBAJ_G0029167.1 mouse_genomes_project 5 38515416 38519217 - Evc protein_coding retained_intron MGP_CBAJ_T0070992.1 MGP_CBAJ_G0029167.1 mouse_genomes_project 5 38517052 38519336 - Evc protein_coding retained_intron MGP_CBAJ_T0070993.1 MGP_CBAJ_G0029167.1 mouse_genomes_project 5 38520029 38538547 - Evc protein_coding retained_intron MGP_CBAJ_T0074719.1 MGP_CBAJ_G0029879.1 mouse_genomes_project 5 152770911 152782014 - MGP_CBAJ_P0074719 Ap1s1 protein_coding protein_coding MGP_CBAJ_T0074720.1 MGP_CBAJ_G0029879.1 mouse_genomes_project 5 152771260 152773570 - Ap1s1 protein_coding retained_intron MGP_CBAJ_T0074721.1 MGP_CBAJ_G0029879.1 mouse_genomes_project 5 152773298 152781674 - MGP_CBAJ_P0074721 Ap1s1 protein_coding protein_coding MGP_CBAJ_T0074722.1 MGP_CBAJ_G0029879.1 mouse_genomes_project 5 152773315 152781921 - MGP_CBAJ_P0074722 Ap1s1 protein_coding protein_coding MGP_CBAJ_T0074723.1 MGP_CBAJ_G0029879.1 mouse_genomes_project 5 152778946 152781286 - MGP_CBAJ_P0074723 Ap1s1 protein_coding protein_coding MGP_CBAJ_T0071990.1 MGP_CBAJ_G0029341.1 mouse_genomes_project 5 94038122 94058646 - MGP_CBAJ_P0071990 Tmprss11b protein_coding protein_coding MGP_CBAJ_T0001437.1 MGP_CBAJ_G0001361.1 mouse_genomes_project 5 23720239 23722834 + TEC TEC MGP_CBAJ_T0070888.1 MGP_CBAJ_G0029151.1 mouse_genomes_project 5 36810512 36944984 + MGP_CBAJ_P0070888 Ablim2 protein_coding protein_coding MGP_CBAJ_T0070889.1 MGP_CBAJ_G0029151.1 mouse_genomes_project 5 36810512 36945491 + MGP_CBAJ_P0070889 Ablim2 protein_coding protein_coding MGP_CBAJ_T0070890.1 MGP_CBAJ_G0029151.1 mouse_genomes_project 5 36810556 36944667 + MGP_CBAJ_P0070890 Ablim2 protein_coding protein_coding MGP_CBAJ_T0070891.1 MGP_CBAJ_G0029151.1 mouse_genomes_project 5 36810563 36945491 + MGP_CBAJ_P0070891 Ablim2 protein_coding protein_coding MGP_CBAJ_T0070892.1 MGP_CBAJ_G0029151.1 mouse_genomes_project 5 36810563 36944983 + MGP_CBAJ_P0070892 Ablim2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070893.1 MGP_CBAJ_G0029151.1 mouse_genomes_project 5 36810598 36944984 + MGP_CBAJ_P0070893 Ablim2 protein_coding protein_coding MGP_CBAJ_T0070894.1 MGP_CBAJ_G0029151.1 mouse_genomes_project 5 36810683 36943937 + MGP_CBAJ_P0070894 Ablim2 protein_coding protein_coding MGP_CBAJ_T0070895.1 MGP_CBAJ_G0029151.1 mouse_genomes_project 5 36867038 36898609 + MGP_CBAJ_P0070895 Ablim2 protein_coding protein_coding MGP_CBAJ_T0070896.1 MGP_CBAJ_G0029151.1 mouse_genomes_project 5 36867105 36943937 + MGP_CBAJ_P0070896 Ablim2 protein_coding protein_coding MGP_CBAJ_T0070897.1 MGP_CBAJ_G0029151.1 mouse_genomes_project 5 36867119 36888499 + MGP_CBAJ_P0070897 Ablim2 protein_coding protein_coding MGP_CBAJ_T0070898.1 MGP_CBAJ_G0029151.1 mouse_genomes_project 5 36883708 36935410 + MGP_CBAJ_P0070898 Ablim2 protein_coding protein_coding MGP_CBAJ_T0070899.1 MGP_CBAJ_G0029151.1 mouse_genomes_project 5 36883739 36896932 + Ablim2 protein_coding retained_intron MGP_CBAJ_T0070900.1 MGP_CBAJ_G0029151.1 mouse_genomes_project 5 36883739 36916303 + MGP_CBAJ_P0070900 Ablim2 protein_coding protein_coding MGP_CBAJ_T0070901.1 MGP_CBAJ_G0029151.1 mouse_genomes_project 5 36896752 36916630 + MGP_CBAJ_P0070901 Ablim2 protein_coding protein_coding MGP_CBAJ_T0070902.1 MGP_CBAJ_G0029151.1 mouse_genomes_project 5 36907253 36930003 + Ablim2 protein_coding retained_intron MGP_CBAJ_T0070903.1 MGP_CBAJ_G0029151.1 mouse_genomes_project 5 36915509 36916630 + Ablim2 protein_coding retained_intron MGP_CBAJ_T0070904.1 MGP_CBAJ_G0029151.1 mouse_genomes_project 5 36916337 36944037 + MGP_CBAJ_P0070904 Ablim2 protein_coding protein_coding MGP_CBAJ_T0074416.1 MGP_CBAJ_G0029821.1 mouse_genomes_project 5 149739892 149813183 - MGP_CBAJ_P0074416 Clip2 protein_coding protein_coding MGP_CBAJ_T0074417.1 MGP_CBAJ_G0029821.1 mouse_genomes_project 5 149739896 149813183 - MGP_CBAJ_P0074417 Clip2 protein_coding protein_coding MGP_CBAJ_T0074418.1 MGP_CBAJ_G0029821.1 mouse_genomes_project 5 149767047 149769413 - Clip2 protein_coding retained_intron MGP_CBAJ_T0071987.1 MGP_CBAJ_G0029340.1 mouse_genomes_project 5 93887367 94011158 - MGP_CBAJ_P0071987 Tmprss11f protein_coding protein_coding MGP_CBAJ_T0071988.1 MGP_CBAJ_G0029340.1 mouse_genomes_project 5 93934958 94011158 - Tmprss11f protein_coding processed_transcript MGP_CBAJ_T0071989.1 MGP_CBAJ_G0029340.1 mouse_genomes_project 5 93968873 94011117 - Tmprss11f protein_coding retained_intron MGP_CBAJ_T0071573.1 MGP_CBAJ_G0029264.1 mouse_genomes_project 5 72177597 72212967 - MGP_CBAJ_P0071573 Bend4 protein_coding protein_coding MGP_CBAJ_T0071574.1 MGP_CBAJ_G0029264.1 mouse_genomes_project 5 72177598 72212785 - MGP_CBAJ_P0071574 Bend4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071575.1 MGP_CBAJ_G0029264.1 mouse_genomes_project 5 72177598 72212785 - MGP_CBAJ_P0071575 Bend4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071576.1 MGP_CBAJ_G0029264.1 mouse_genomes_project 5 72177598 72212498 - MGP_CBAJ_P0071576 Bend4 protein_coding protein_coding MGP_CBAJ_T0071577.1 MGP_CBAJ_G0029264.1 mouse_genomes_project 5 72177598 72213478 - MGP_CBAJ_P0071577 Bend4 protein_coding protein_coding MGP_CBAJ_T0008107.1 MGP_CBAJ_G0006602.1 mouse_genomes_project 5 106183811 106196157 + Gm2861 lincRNA lincRNA MGP_CBAJ_T0001748.1 MGP_CBAJ_G0001666.1 mouse_genomes_project 5 130441474 130441581 + TEC TEC MGP_CBAJ_T0004681.1 MGP_CBAJ_G0004037.1 mouse_genomes_project 5 115953989 115958180 - Lrrc8dos antisense antisense MGP_CBAJ_T0001546.1 MGP_CBAJ_G0001466.1 mouse_genomes_project 5 53411511 53417901 + TEC TEC MGP_CBAJ_T0074871.1 MGP_CBAJ_G0029907.1 mouse_genomes_project 5 153724711 153725625 + MGP_CBAJ_P0074871 Ppp1r35 protein_coding protein_coding MGP_CBAJ_T0074872.1 MGP_CBAJ_G0029907.1 mouse_genomes_project 5 153724766 153725973 + MGP_CBAJ_P0074872 Ppp1r35 protein_coding protein_coding MGP_CBAJ_T0074873.1 MGP_CBAJ_G0029907.1 mouse_genomes_project 5 153725299 153725969 + MGP_CBAJ_P0074873 Ppp1r35 protein_coding protein_coding MGP_CBAJ_T0074874.1 MGP_CBAJ_G0029907.1 mouse_genomes_project 5 153725406 153725973 + Ppp1r35 protein_coding retained_intron MGP_CBAJ_T0070643.1 MGP_CBAJ_G0029116.1 mouse_genomes_project 5 34419481 34441676 - MGP_CBAJ_P0070643 Slbp protein_coding protein_coding MGP_CBAJ_T0070644.1 MGP_CBAJ_G0029116.1 mouse_genomes_project 5 34426934 34441905 - MGP_CBAJ_P0070644 Slbp protein_coding protein_coding MGP_CBAJ_T0070645.1 MGP_CBAJ_G0029116.1 mouse_genomes_project 5 34426934 34441637 - MGP_CBAJ_P0070645 Slbp protein_coding protein_coding MGP_CBAJ_T0070646.1 MGP_CBAJ_G0029116.1 mouse_genomes_project 5 34428821 34441669 - Slbp protein_coding retained_intron MGP_CBAJ_T0070647.1 MGP_CBAJ_G0029116.1 mouse_genomes_project 5 34430200 34441631 - MGP_CBAJ_P0070647 Slbp protein_coding protein_coding MGP_CBAJ_T0070648.1 MGP_CBAJ_G0029116.1 mouse_genomes_project 5 34434723 34441627 - MGP_CBAJ_P0070648 Slbp protein_coding protein_coding MGP_CBAJ_T0070649.1 MGP_CBAJ_G0029116.1 mouse_genomes_project 5 34436501 34441684 - Slbp protein_coding retained_intron MGP_CBAJ_T0070650.1 MGP_CBAJ_G0029116.1 mouse_genomes_project 5 34440955 34441632 - Slbp protein_coding retained_intron MGP_CBAJ_T0072195.1 MGP_CBAJ_G0029407.1 mouse_genomes_project 5 99606947 99728418 + MGP_CBAJ_P0072195 Parm1 protein_coding protein_coding MGP_CBAJ_T0004623.1 MGP_CBAJ_G0003998.1 mouse_genomes_project 5 71746485 71748811 - Gm15948 antisense antisense MGP_CBAJ_T0001733.1 MGP_CBAJ_G0001651.1 mouse_genomes_project 5 125678113 125682610 - TEC TEC MGP_CBAJ_T0014968.1 MGP_CBAJ_G0013080.1 mouse_genomes_project 5 160583625 160584163 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008205.1 MGP_CBAJ_G0006664.1 mouse_genomes_project 5 126489644 126492372 + Gm13790 lincRNA lincRNA MGP_CBAJ_T0004599.1 MGP_CBAJ_G0003979.1 mouse_genomes_project 5 45987504 45989576 + Gm16401 antisense antisense MGP_CBAJ_T0004600.1 MGP_CBAJ_G0003979.1 mouse_genomes_project 5 45987504 45989578 + Gm16401 antisense antisense MGP_CBAJ_T0072811.1 MGP_CBAJ_G0029536.1 mouse_genomes_project 5 119810865 119822891 - MGP_CBAJ_P0072811 protein_coding protein_coding MGP_CBAJ_T0072814.1 MGP_CBAJ_G0029539.1 mouse_genomes_project 5 120450051 120457024 - MGP_CBAJ_P0072814 Crlf2 protein_coding protein_coding MGP_CBAJ_T0072815.1 MGP_CBAJ_G0029539.1 mouse_genomes_project 5 120450055 120457075 - MGP_CBAJ_P0072815 Crlf2 protein_coding protein_coding MGP_CBAJ_T0072816.1 MGP_CBAJ_G0029539.1 mouse_genomes_project 5 120450057 120454575 - MGP_CBAJ_P0072816 Crlf2 protein_coding protein_coding MGP_CBAJ_T0075562.1 MGP_CBAJ_G0030067.1 mouse_genomes_project 5 165864864 165880988 - MGP_CBAJ_P0075562 Slc46a3 protein_coding protein_coding MGP_CBAJ_T0075563.1 MGP_CBAJ_G0030067.1 mouse_genomes_project 5 165864868 165880988 - MGP_CBAJ_P0075563 Slc46a3 protein_coding protein_coding MGP_CBAJ_T0075564.1 MGP_CBAJ_G0030067.1 mouse_genomes_project 5 165864986 165866297 - Slc46a3 protein_coding retained_intron MGP_CBAJ_T0075565.1 MGP_CBAJ_G0030067.1 mouse_genomes_project 5 165880051 165880988 - MGP_CBAJ_P0075565 Slc46a3 protein_coding protein_coding MGP_CBAJ_T0075128.1 MGP_CBAJ_G0029965.1 mouse_genomes_project 5 156975447 157038699 - MGP_CBAJ_P0075128 Snx8 protein_coding protein_coding MGP_CBAJ_T0075129.1 MGP_CBAJ_G0029965.1 mouse_genomes_project 5 156975452 156998240 - MGP_CBAJ_P0075129 Snx8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075130.1 MGP_CBAJ_G0029965.1 mouse_genomes_project 5 156990613 156991372 - Snx8 protein_coding retained_intron MGP_CBAJ_T0075131.1 MGP_CBAJ_G0029965.1 mouse_genomes_project 5 156991289 157007928 - MGP_CBAJ_P0075131 Snx8 protein_coding protein_coding MGP_CBAJ_T0075132.1 MGP_CBAJ_G0029965.1 mouse_genomes_project 5 156991305 157038699 - MGP_CBAJ_P0075132 Snx8 protein_coding protein_coding MGP_CBAJ_T0071446.1 MGP_CBAJ_G0029250.1 mouse_genomes_project 5 70070193 70148818 + MGP_CBAJ_P0071446 Ube2k protein_coding protein_coding MGP_CBAJ_T0071447.1 MGP_CBAJ_G0029250.1 mouse_genomes_project 5 70070218 70152000 + MGP_CBAJ_P0071447 Ube2k protein_coding protein_coding MGP_CBAJ_T0071448.1 MGP_CBAJ_G0029250.1 mouse_genomes_project 5 70070223 70148818 + MGP_CBAJ_P0071448 Ube2k protein_coding protein_coding MGP_CBAJ_T0071449.1 MGP_CBAJ_G0029250.1 mouse_genomes_project 5 70070266 70148208 + MGP_CBAJ_P0071449 Ube2k protein_coding nonsense_mediated_decay MGP_CBAJ_T0071450.1 MGP_CBAJ_G0029250.1 mouse_genomes_project 5 70070416 70149091 + MGP_CBAJ_P0071450 Ube2k protein_coding protein_coding MGP_CBAJ_T0071451.1 MGP_CBAJ_G0029250.1 mouse_genomes_project 5 70113921 70116588 + Ube2k protein_coding retained_intron MGP_CBAJ_T0071452.1 MGP_CBAJ_G0029250.1 mouse_genomes_project 5 70144658 70148208 + Ube2k protein_coding retained_intron MGP_CBAJ_T0073957.1 MGP_CBAJ_G0029746.1 mouse_genomes_project 5 137849254 137862144 + MGP_CBAJ_P0073957 Gm43518 protein_coding protein_coding MGP_CBAJ_T0072644.1 MGP_CBAJ_G0029500.1 mouse_genomes_project 5 117405333 117613909 - MGP_CBAJ_P0072644 Tgfbr3 protein_coding protein_coding MGP_CBAJ_T0072645.1 MGP_CBAJ_G0029500.1 mouse_genomes_project 5 117410908 117509274 - Tgfbr3 protein_coding processed_transcript MGP_CBAJ_T0072646.1 MGP_CBAJ_G0029500.1 mouse_genomes_project 5 117423129 117440014 - MGP_CBAJ_P0072646 Tgfbr3 protein_coding protein_coding MGP_CBAJ_T0072647.1 MGP_CBAJ_G0029500.1 mouse_genomes_project 5 117457194 117613875 - Tgfbr3 protein_coding retained_intron MGP_CBAJ_T0001558.1 MGP_CBAJ_G0001478.1 mouse_genomes_project 5 54974042 54976918 + TEC TEC MGP_CBAJ_T0072011.1 MGP_CBAJ_G0029349.1 mouse_genomes_project 5 94666143 94678757 - MGP_CBAJ_P0072011 protein_coding protein_coding MGP_CBAJ_T0072757.1 MGP_CBAJ_G0029525.1 mouse_genomes_project 5 119099832 119122223 - MGP_CBAJ_P0072757 Gak protein_coding protein_coding MGP_CBAJ_T0072758.1 MGP_CBAJ_G0029525.1 mouse_genomes_project 5 119099835 119168846 - MGP_CBAJ_P0072758 Gak protein_coding protein_coding MGP_CBAJ_T0072759.1 MGP_CBAJ_G0029525.1 mouse_genomes_project 5 119099835 119168846 - MGP_CBAJ_P0072759 Gak protein_coding nonsense_mediated_decay MGP_CBAJ_T0072760.1 MGP_CBAJ_G0029525.1 mouse_genomes_project 5 119099841 119168846 - MGP_CBAJ_P0072760 Gak protein_coding nonsense_mediated_decay MGP_CBAJ_T0072761.1 MGP_CBAJ_G0029525.1 mouse_genomes_project 5 119100594 119102292 - Gak protein_coding retained_intron MGP_CBAJ_T0072762.1 MGP_CBAJ_G0029525.1 mouse_genomes_project 5 119101857 119168862 - MGP_CBAJ_P0072762 Gak protein_coding nonsense_mediated_decay MGP_CBAJ_T0072763.1 MGP_CBAJ_G0029525.1 mouse_genomes_project 5 119102397 119107670 - Gak protein_coding processed_transcript MGP_CBAJ_T0072764.1 MGP_CBAJ_G0029525.1 mouse_genomes_project 5 119107326 119111554 - Gak protein_coding retained_intron MGP_CBAJ_T0072765.1 MGP_CBAJ_G0029525.1 mouse_genomes_project 5 119110674 119163990 - Gak protein_coding retained_intron MGP_CBAJ_T0072766.1 MGP_CBAJ_G0029525.1 mouse_genomes_project 5 119113690 119122259 - MGP_CBAJ_P0072766 Gak protein_coding protein_coding MGP_CBAJ_T0072767.1 MGP_CBAJ_G0029525.1 mouse_genomes_project 5 119114966 119130929 - MGP_CBAJ_P0072767 Gak protein_coding nonsense_mediated_decay MGP_CBAJ_T0072768.1 MGP_CBAJ_G0029525.1 mouse_genomes_project 5 119152456 119168530 - Gak protein_coding processed_transcript MGP_CBAJ_T0072769.1 MGP_CBAJ_G0029525.1 mouse_genomes_project 5 119162210 119168800 - MGP_CBAJ_P0072769 Gak protein_coding nonsense_mediated_decay MGP_CBAJ_T0004603.1 MGP_CBAJ_G0003982.1 mouse_genomes_project 5 46583610 46605599 + Gm43507 antisense antisense MGP_CBAJ_T0004604.1 MGP_CBAJ_G0003982.1 mouse_genomes_project 5 46596662 46607010 + Gm43507 antisense antisense MGP_CBAJ_T0072006.1 MGP_CBAJ_G0029347.1 mouse_genomes_project 5 94487719 94514271 - MGP_CBAJ_P0072006 Ugt2b36 protein_coding protein_coding MGP_CBAJ_T0072007.1 MGP_CBAJ_G0029347.1 mouse_genomes_project 5 94488230 94514264 - MGP_CBAJ_P0072007 Ugt2b36 protein_coding protein_coding MGP_CBAJ_T0072008.1 MGP_CBAJ_G0029347.1 mouse_genomes_project 5 94488233 94512873 - Ugt2b36 protein_coding retained_intron MGP_CBAJ_T0072009.1 MGP_CBAJ_G0029347.1 mouse_genomes_project 5 94502776 94514262 - MGP_CBAJ_P0072009 Ugt2b36 protein_coding protein_coding MGP_CBAJ_T0001683.1 MGP_CBAJ_G0001601.1 mouse_genomes_project 5 105827887 105831123 + TEC TEC MGP_CBAJ_T0074283.1 MGP_CBAJ_G0029805.1 mouse_genomes_project 5 144835235 144846179 + MGP_CBAJ_P0074283 Kctd7 protein_coding protein_coding MGP_CBAJ_T0074284.1 MGP_CBAJ_G0029805.1 mouse_genomes_project 5 144835298 144842105 + MGP_CBAJ_P0074284 Kctd7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074285.1 MGP_CBAJ_G0029805.1 mouse_genomes_project 5 144835478 144842867 + MGP_CBAJ_P0074285 Kctd7 protein_coding protein_coding MGP_CBAJ_T0075608.1 MGP_CBAJ_G0030074.1 mouse_genomes_project 5 167423886 167454384 + MGP_CBAJ_P0075608 Uspl1 protein_coding protein_coding MGP_CBAJ_T0075609.1 MGP_CBAJ_G0030074.1 mouse_genomes_project 5 167423897 167433547 + MGP_CBAJ_P0075609 Uspl1 protein_coding protein_coding MGP_CBAJ_T0075610.1 MGP_CBAJ_G0030074.1 mouse_genomes_project 5 167423897 167454384 + MGP_CBAJ_P0075610 Uspl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075611.1 MGP_CBAJ_G0030074.1 mouse_genomes_project 5 167423917 167454395 + MGP_CBAJ_P0075611 Uspl1 protein_coding protein_coding MGP_CBAJ_T0075612.1 MGP_CBAJ_G0030074.1 mouse_genomes_project 5 167424000 167433314 + Uspl1 protein_coding processed_transcript MGP_CBAJ_T0075613.1 MGP_CBAJ_G0030074.1 mouse_genomes_project 5 167425472 167428224 + Uspl1 protein_coding retained_intron MGP_CBAJ_T0075614.1 MGP_CBAJ_G0030074.1 mouse_genomes_project 5 167428078 167429360 + Uspl1 protein_coding retained_intron MGP_CBAJ_T0075615.1 MGP_CBAJ_G0030074.1 mouse_genomes_project 5 167430555 167454388 + Uspl1 protein_coding retained_intron MGP_CBAJ_T0072885.1 MGP_CBAJ_G0029551.1 mouse_genomes_project 5 121671262 121766673 - MGP_CBAJ_P0072885 Fbrsl1 protein_coding protein_coding MGP_CBAJ_T0072886.1 MGP_CBAJ_G0029551.1 mouse_genomes_project 5 121672299 121766656 - MGP_CBAJ_P0072886 Fbrsl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072887.1 MGP_CBAJ_G0029551.1 mouse_genomes_project 5 121672550 121766337 - MGP_CBAJ_P0072887 Fbrsl1 protein_coding protein_coding MGP_CBAJ_T0072888.1 MGP_CBAJ_G0029551.1 mouse_genomes_project 5 121693381 121751196 - MGP_CBAJ_P0072888 Fbrsl1 protein_coding protein_coding MGP_CBAJ_T0072889.1 MGP_CBAJ_G0029551.1 mouse_genomes_project 5 121748053 121750044 - Fbrsl1 protein_coding processed_transcript MGP_CBAJ_T0072890.1 MGP_CBAJ_G0029551.1 mouse_genomes_project 5 121750176 121751503 - Fbrsl1 protein_coding processed_transcript MGP_CBAJ_T0072891.1 MGP_CBAJ_G0029551.1 mouse_genomes_project 5 121750176 121766673 - MGP_CBAJ_P0072891 Fbrsl1 protein_coding protein_coding MGP_CBAJ_T0004633.1 MGP_CBAJ_G0004007.1 mouse_genomes_project 5 79610055 79627478 + Usp46os1 antisense antisense MGP_CBAJ_T0101927.1 MGP_CBAJ_G0039958.1 mouse_genomes_project 5 361931 362108 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0074674.1 MGP_CBAJ_G0029871.1 mouse_genomes_project 5 152312637 152323741 + MGP_CBAJ_P0074674 Myl10 protein_coding protein_coding MGP_CBAJ_T0074675.1 MGP_CBAJ_G0029871.1 mouse_genomes_project 5 152312669 152323639 + MGP_CBAJ_P0074675 Myl10 protein_coding protein_coding MGP_CBAJ_T0074676.1 MGP_CBAJ_G0029871.1 mouse_genomes_project 5 152313196 152323741 + MGP_CBAJ_P0074676 Myl10 protein_coding protein_coding MGP_CBAJ_T0074677.1 MGP_CBAJ_G0029871.1 mouse_genomes_project 5 152313668 152323741 + MGP_CBAJ_P0074677 Myl10 protein_coding protein_coding MGP_CBAJ_T0074678.1 MGP_CBAJ_G0029871.1 mouse_genomes_project 5 152320592 152323741 + Myl10 protein_coding retained_intron MGP_CBAJ_T0074679.1 MGP_CBAJ_G0029871.1 mouse_genomes_project 5 152320643 152323739 + Myl10 protein_coding retained_intron MGP_CBAJ_T0075100.1 MGP_CBAJ_G0029957.1 mouse_genomes_project 5 156350660 156361771 + MGP_CBAJ_P0075100 Mafk protein_coding protein_coding MGP_CBAJ_T0075101.1 MGP_CBAJ_G0029957.1 mouse_genomes_project 5 156350681 156358616 + Mafk protein_coding processed_transcript MGP_CBAJ_T0075102.1 MGP_CBAJ_G0029957.1 mouse_genomes_project 5 156356624 156361447 + MGP_CBAJ_P0075102 Mafk protein_coding protein_coding MGP_CBAJ_T0070155.1 MGP_CBAJ_G0029033.1 mouse_genomes_project 5 27808859 27821898 + MGP_CBAJ_P0070155 Htr5a protein_coding protein_coding MGP_CBAJ_T0004586.1 MGP_CBAJ_G0003970.1 mouse_genomes_project 5 36775283 36777214 + Gm15650 antisense antisense MGP_CBAJ_T0075648.1 MGP_CBAJ_G0030081.1 mouse_genomes_project 5 168431217 168484320 + Rxfp2 protein_coding retained_intron MGP_CBAJ_T0075649.1 MGP_CBAJ_G0030081.1 mouse_genomes_project 5 168431217 168497484 + MGP_CBAJ_P0075649 Rxfp2 protein_coding protein_coding MGP_CBAJ_T0075650.1 MGP_CBAJ_G0030081.1 mouse_genomes_project 5 168431217 168497484 + MGP_CBAJ_P0075650 Rxfp2 protein_coding protein_coding MGP_CBAJ_T0075651.1 MGP_CBAJ_G0030081.1 mouse_genomes_project 5 168431248 168497476 + MGP_CBAJ_P0075651 Rxfp2 protein_coding protein_coding MGP_CBAJ_T0075652.1 MGP_CBAJ_G0030081.1 mouse_genomes_project 5 168482136 168485622 + Rxfp2 protein_coding retained_intron MGP_CBAJ_T0075653.1 MGP_CBAJ_G0030081.1 mouse_genomes_project 5 168496799 168498332 + Rxfp2 protein_coding processed_transcript MGP_CBAJ_T0101933.1 MGP_CBAJ_G0039964.1 mouse_genomes_project 5 73472487 73502391 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0071417.1 MGP_CBAJ_G0029245.1 mouse_genomes_project 5 69900894 69904178 - MGP_CBAJ_P0071417 protein_coding protein_coding MGP_CBAJ_T0071418.1 MGP_CBAJ_G0029245.1 mouse_genomes_project 5 69900901 69901658 - protein_coding retained_intron MGP_CBAJ_T0071419.1 MGP_CBAJ_G0029245.1 mouse_genomes_project 5 69900901 69903749 - MGP_CBAJ_P0071419 protein_coding protein_coding MGP_CBAJ_T0071420.1 MGP_CBAJ_G0029245.1 mouse_genomes_project 5 69900901 69903577 - MGP_CBAJ_P0071420 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071421.1 MGP_CBAJ_G0029245.1 mouse_genomes_project 5 69900901 69904143 - MGP_CBAJ_P0071421 protein_coding protein_coding MGP_CBAJ_T0071422.1 MGP_CBAJ_G0029245.1 mouse_genomes_project 5 69900902 69904142 - protein_coding retained_intron MGP_CBAJ_T0071423.1 MGP_CBAJ_G0029245.1 mouse_genomes_project 5 69901139 69902117 - protein_coding retained_intron MGP_CBAJ_T0071424.1 MGP_CBAJ_G0029245.1 mouse_genomes_project 5 69901420 69904125 - protein_coding retained_intron MGP_CBAJ_T0071425.1 MGP_CBAJ_G0029245.1 mouse_genomes_project 5 69901660 69903735 - protein_coding retained_intron MGP_CBAJ_T0001470.1 MGP_CBAJ_G0001391.1 mouse_genomes_project 5 35491752 35492221 + TEC TEC MGP_CBAJ_T0075120.1 MGP_CBAJ_G0029963.1 mouse_genomes_project 5 156956821 156972788 + MGP_CBAJ_P0075120 Nudt1 protein_coding protein_coding MGP_CBAJ_T0075122.1 MGP_CBAJ_G0029963.1 mouse_genomes_project 5 156967000 156973293 + MGP_CBAJ_P0075122 Nudt1 protein_coding protein_coding MGP_CBAJ_T0075123.1 MGP_CBAJ_G0029963.1 mouse_genomes_project 5 156967049 156973293 + MGP_CBAJ_P0075123 Nudt1 protein_coding protein_coding MGP_CBAJ_T0075124.1 MGP_CBAJ_G0029963.1 mouse_genomes_project 5 156967094 156973097 + MGP_CBAJ_P0075124 Nudt1 protein_coding protein_coding MGP_CBAJ_T0075125.1 MGP_CBAJ_G0029963.1 mouse_genomes_project 5 156967535 156972964 + MGP_CBAJ_P0075125 Nudt1 protein_coding protein_coding MGP_CBAJ_T0075126.1 MGP_CBAJ_G0029963.1 mouse_genomes_project 5 156967564 156970852 + MGP_CBAJ_P0075126 Nudt1 protein_coding protein_coding MGP_CBAJ_T0075127.1 MGP_CBAJ_G0029963.1 mouse_genomes_project 5 156969729 156970968 + Nudt1 protein_coding processed_transcript MGP_CBAJ_T0001804.1 MGP_CBAJ_G0001721.1 mouse_genomes_project 5 144634332 144636193 + TEC TEC MGP_CBAJ_T0072568.1 MGP_CBAJ_G0029487.1 mouse_genomes_project 5 114962239 115018734 - MGP_CBAJ_P0072568 Abcg3 protein_coding protein_coding MGP_CBAJ_T0072569.1 MGP_CBAJ_G0029487.1 mouse_genomes_project 5 114964302 115013850 - MGP_CBAJ_P0072569 Abcg3 protein_coding protein_coding MGP_CBAJ_T0011479.1 MGP_CBAJ_G0009617.1 mouse_genomes_project 5 123748032 123748393 - Gm27998 misc_RNA misc_RNA MGP_CBAJ_T0008137.1 MGP_CBAJ_G0006623.1 mouse_genomes_project 5 114078366 114085783 - Gm42792 lincRNA lincRNA MGP_CBAJ_T0014857.1 MGP_CBAJ_G0012969.1 mouse_genomes_project 5 105069210 105069621 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0074462.1 MGP_CBAJ_G0029831.1 mouse_genomes_project 5 150298397 150300219 - MGP_CBAJ_P0074462 Cldn4 protein_coding protein_coding MGP_CBAJ_T0004763.1 MGP_CBAJ_G0004096.1 mouse_genomes_project 5 144921503 144924118 - Gm42469 antisense antisense MGP_CBAJ_T0001655.1 MGP_CBAJ_G0001573.1 mouse_genomes_project 5 79700236 79707406 - TEC TEC MGP_CBAJ_T0073447.1 MGP_CBAJ_G0029656.1 mouse_genomes_project 5 130658909 130763559 - MGP_CBAJ_P0073447 Fbxw8 protein_coding protein_coding MGP_CBAJ_T0073448.1 MGP_CBAJ_G0029656.1 mouse_genomes_project 5 130670999 130763521 - Fbxw8 protein_coding retained_intron MGP_CBAJ_T0010608.1 MGP_CBAJ_G0008746.1 mouse_genomes_project 5 154191836 154191918 - Mir106b miRNA miRNA MGP_CBAJ_T0073495.1 MGP_CBAJ_G0029668.1 mouse_genomes_project 5 133517825 133540699 + MGP_CBAJ_P0073495 Slc8b1 protein_coding protein_coding MGP_CBAJ_T0073496.1 MGP_CBAJ_G0029668.1 mouse_genomes_project 5 133517892 133540694 + MGP_CBAJ_P0073496 Slc8b1 protein_coding protein_coding MGP_CBAJ_T0073497.1 MGP_CBAJ_G0029668.1 mouse_genomes_project 5 133517909 133540695 + MGP_CBAJ_P0073497 Slc8b1 protein_coding protein_coding MGP_CBAJ_T0073498.1 MGP_CBAJ_G0029668.1 mouse_genomes_project 5 133517927 133519845 + MGP_CBAJ_P0073498 Slc8b1 protein_coding protein_coding MGP_CBAJ_T0073499.1 MGP_CBAJ_G0029668.1 mouse_genomes_project 5 133519524 133526383 + MGP_CBAJ_P0073499 Slc8b1 protein_coding protein_coding MGP_CBAJ_T0073500.1 MGP_CBAJ_G0029668.1 mouse_genomes_project 5 133519799 133539732 + MGP_CBAJ_P0073500 Slc8b1 protein_coding protein_coding MGP_CBAJ_T0073501.1 MGP_CBAJ_G0029668.1 mouse_genomes_project 5 133527410 133528852 + Slc8b1 protein_coding retained_intron MGP_CBAJ_T0014767.1 MGP_CBAJ_G0012879.1 mouse_genomes_project 5 61771568 61771790 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0069803.1 MGP_CBAJ_G0028960.1 mouse_genomes_project 5 12871036 13271906 + MGP_CBAJ_P0069803 Pclo protein_coding protein_coding MGP_CBAJ_T0069804.1 MGP_CBAJ_G0028960.1 mouse_genomes_project 5 12871036 13191037 + MGP_CBAJ_P0069804 Pclo protein_coding protein_coding MGP_CBAJ_T0069805.1 MGP_CBAJ_G0028960.1 mouse_genomes_project 5 12871111 13268630 + Pclo protein_coding retained_intron MGP_CBAJ_T0069806.1 MGP_CBAJ_G0028960.1 mouse_genomes_project 5 13062187 13191048 + MGP_CBAJ_P0069806 Pclo protein_coding protein_coding MGP_CBAJ_T0072734.1 MGP_CBAJ_G0029517.1 mouse_genomes_project 5 118584733 118625436 + MGP_CBAJ_P0072734 Ccdc18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072735.1 MGP_CBAJ_G0029517.1 mouse_genomes_project 5 118584772 118718303 + MGP_CBAJ_P0072735 Ccdc18 protein_coding protein_coding MGP_CBAJ_T0072736.1 MGP_CBAJ_G0029517.1 mouse_genomes_project 5 118584804 118593180 + Ccdc18 protein_coding retained_intron MGP_CBAJ_T0072737.1 MGP_CBAJ_G0029517.1 mouse_genomes_project 5 118625621 118637931 + Ccdc18 protein_coding processed_transcript MGP_CBAJ_T0100631.1 MGP_CBAJ_G0038886.1 mouse_genomes_project 5 110295242 110295414 + Gm26286 snoRNA snoRNA MGP_CBAJ_T0072874.1 MGP_CBAJ_G0029549.1 mouse_genomes_project 5 121648698 121651842 - MGP_CBAJ_P0072874 P2rx2 protein_coding protein_coding MGP_CBAJ_T0072875.1 MGP_CBAJ_G0029549.1 mouse_genomes_project 5 121648698 121652099 - MGP_CBAJ_P0072875 P2rx2 protein_coding protein_coding MGP_CBAJ_T0072876.1 MGP_CBAJ_G0029549.1 mouse_genomes_project 5 121648698 121651842 - MGP_CBAJ_P0072876 P2rx2 protein_coding protein_coding MGP_CBAJ_T0072877.1 MGP_CBAJ_G0029549.1 mouse_genomes_project 5 121648699 121651863 - MGP_CBAJ_P0072877 P2rx2 protein_coding protein_coding MGP_CBAJ_T0072878.1 MGP_CBAJ_G0029549.1 mouse_genomes_project 5 121648856 121652036 - P2rx2 protein_coding retained_intron MGP_CBAJ_T0072879.1 MGP_CBAJ_G0029549.1 mouse_genomes_project 5 121648856 121652036 - MGP_CBAJ_P0072879 P2rx2 protein_coding protein_coding MGP_CBAJ_T0014877.1 MGP_CBAJ_G0012989.1 mouse_genomes_project 5 116015476 116015942 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001504.1 MGP_CBAJ_G0001425.1 mouse_genomes_project 5 46694606 46696825 - TEC TEC MGP_CBAJ_T0075514.1 MGP_CBAJ_G0030057.1 mouse_genomes_project 5 164812071 164876395 - MGP_CBAJ_P0075514 Lnx2 protein_coding protein_coding MGP_CBAJ_T0075515.1 MGP_CBAJ_G0030057.1 mouse_genomes_project 5 164813679 164814451 - Lnx2 protein_coding processed_transcript MGP_CBAJ_T0008122.1 MGP_CBAJ_G0006613.1 mouse_genomes_project 5 109570407 109577760 + 2310034O05Rik lincRNA lincRNA MGP_CBAJ_T0008123.1 MGP_CBAJ_G0006613.1 mouse_genomes_project 5 109570423 109576452 + 2310034O05Rik lincRNA lincRNA MGP_CBAJ_T0001837.1 MGP_CBAJ_G0001754.1 mouse_genomes_project 5 149369411 149370775 + TEC TEC MGP_CBAJ_T0001838.1 MGP_CBAJ_G0001754.1 mouse_genomes_project 5 149369423 149370022 + TEC TEC MGP_CBAJ_T0014657.1 MGP_CBAJ_G0012769.1 mouse_genomes_project 5 16181442 16184355 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001592.1 MGP_CBAJ_G0001511.1 mouse_genomes_project 5 69920753 69921520 + TEC TEC MGP_CBAJ_T0001811.1 MGP_CBAJ_G0001728.1 mouse_genomes_project 5 145906462 145908097 - TEC TEC MGP_CBAJ_T0098063.1 MGP_CBAJ_G0036336.1 mouse_genomes_project 5 132127248 132127365 + n-R5s175 rRNA rRNA MGP_CBAJ_T0069995.1 MGP_CBAJ_G0029000.1 mouse_genomes_project 5 23731908 23756051 + MGP_CBAJ_P0069995 Nupl2 protein_coding protein_coding MGP_CBAJ_T0069996.1 MGP_CBAJ_G0029000.1 mouse_genomes_project 5 23731945 23754875 + MGP_CBAJ_P0069996 Nupl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069997.1 MGP_CBAJ_G0029000.1 mouse_genomes_project 5 23734453 23736827 + Nupl2 protein_coding retained_intron MGP_CBAJ_T0069998.1 MGP_CBAJ_G0029000.1 mouse_genomes_project 5 23750004 23753470 + Nupl2 protein_coding retained_intron MGP_CBAJ_T0075557.1 MGP_CBAJ_G0030066.1 mouse_genomes_project 5 165847067 165849262 + Pomp protein_coding retained_intron MGP_CBAJ_T0075558.1 MGP_CBAJ_G0030066.1 mouse_genomes_project 5 165847083 165859491 + MGP_CBAJ_P0075558 Pomp protein_coding protein_coding MGP_CBAJ_T0075559.1 MGP_CBAJ_G0030066.1 mouse_genomes_project 5 165847119 165861959 + MGP_CBAJ_P0075559 Pomp protein_coding protein_coding MGP_CBAJ_T0075560.1 MGP_CBAJ_G0030066.1 mouse_genomes_project 5 165856812 165862039 + Pomp protein_coding processed_transcript MGP_CBAJ_T0075561.1 MGP_CBAJ_G0030066.1 mouse_genomes_project 5 165858861 165861997 + Pomp protein_coding retained_intron MGP_CBAJ_T0071623.1 MGP_CBAJ_G0029275.1 mouse_genomes_project 5 76138223 76297304 - MGP_CBAJ_P0071623 Gabra2 protein_coding protein_coding MGP_CBAJ_T0071624.1 MGP_CBAJ_G0029275.1 mouse_genomes_project 5 76140111 76297264 - MGP_CBAJ_P0071624 Gabra2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071625.1 MGP_CBAJ_G0029275.1 mouse_genomes_project 5 76143460 76200954 - Gabra2 protein_coding retained_intron MGP_CBAJ_T0071626.1 MGP_CBAJ_G0029275.1 mouse_genomes_project 5 76143566 76296119 - MGP_CBAJ_P0071626 Gabra2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071627.1 MGP_CBAJ_G0029275.1 mouse_genomes_project 5 76155957 76296679 - Gabra2 protein_coding processed_transcript MGP_CBAJ_T0071628.1 MGP_CBAJ_G0029275.1 mouse_genomes_project 5 76293228 76296344 - Gabra2 protein_coding retained_intron MGP_CBAJ_T0069557.1 MGP_CBAJ_G0028923.1 mouse_genomes_project 5 563993 606356 + MGP_CBAJ_P0069557 Pex1 protein_coding protein_coding MGP_CBAJ_T0069558.1 MGP_CBAJ_G0028923.1 mouse_genomes_project 5 563993 606354 + MGP_CBAJ_P0069558 Pex1 protein_coding protein_coding MGP_CBAJ_T0069559.1 MGP_CBAJ_G0028923.1 mouse_genomes_project 5 564126 575841 + MGP_CBAJ_P0069559 Pex1 protein_coding protein_coding MGP_CBAJ_T0069560.1 MGP_CBAJ_G0028923.1 mouse_genomes_project 5 564298 593117 + MGP_CBAJ_P0069560 Pex1 protein_coding protein_coding MGP_CBAJ_T0069561.1 MGP_CBAJ_G0028923.1 mouse_genomes_project 5 574800 576100 + Pex1 protein_coding retained_intron MGP_CBAJ_T0069562.1 MGP_CBAJ_G0028923.1 mouse_genomes_project 5 576180 589796 + MGP_CBAJ_P0069562 Pex1 protein_coding protein_coding MGP_CBAJ_T0069563.1 MGP_CBAJ_G0028923.1 mouse_genomes_project 5 579597 587202 + Pex1 protein_coding retained_intron MGP_CBAJ_T0069564.1 MGP_CBAJ_G0028923.1 mouse_genomes_project 5 587982 593590 + MGP_CBAJ_P0069564 Pex1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069565.1 MGP_CBAJ_G0028923.1 mouse_genomes_project 5 588855 589842 + Pex1 protein_coding retained_intron MGP_CBAJ_T0069566.1 MGP_CBAJ_G0028923.1 mouse_genomes_project 5 593151 593554 + Pex1 protein_coding retained_intron MGP_CBAJ_T0069567.1 MGP_CBAJ_G0028923.1 mouse_genomes_project 5 596289 596927 + Pex1 protein_coding retained_intron MGP_CBAJ_T0069569.1 MGP_CBAJ_G0028923.1 mouse_genomes_project 5 604294 605035 + Pex1 protein_coding retained_intron MGP_CBAJ_T0069570.1 MGP_CBAJ_G0028923.1 mouse_genomes_project 5 604738 606085 + Pex1 protein_coding retained_intron MGP_CBAJ_T0069571.1 MGP_CBAJ_G0028923.1 mouse_genomes_project 5 605274 605942 + Pex1 protein_coding retained_intron MGP_CBAJ_T0008233.1 MGP_CBAJ_G0006684.1 mouse_genomes_project 5 131998355 132006159 - Gm7538 lincRNA lincRNA MGP_CBAJ_T0001444.1 MGP_CBAJ_G0001367.1 mouse_genomes_project 5 28027980 28032332 - TEC TEC MGP_CBAJ_T0008346.1 MGP_CBAJ_G0006763.1 mouse_genomes_project 5 167124319 167177462 - Gm15406 lincRNA lincRNA MGP_CBAJ_T0008348.1 MGP_CBAJ_G0006763.1 mouse_genomes_project 5 167130035 167177405 - Gm15406 lincRNA lincRNA MGP_CBAJ_T0001622.1 MGP_CBAJ_G0001541.1 mouse_genomes_project 5 71663058 71665761 + TEC TEC MGP_CBAJ_T0073465.1 MGP_CBAJ_G0029661.1 mouse_genomes_project 5 132547311 132550294 + Tbx3 protein_coding retained_intron MGP_CBAJ_T0073466.1 MGP_CBAJ_G0029661.1 mouse_genomes_project 5 132547311 132561159 + MGP_CBAJ_P0073466 Tbx3 protein_coding protein_coding MGP_CBAJ_T0073467.1 MGP_CBAJ_G0029661.1 mouse_genomes_project 5 132547504 132561321 + MGP_CBAJ_P0073467 Tbx3 protein_coding protein_coding MGP_CBAJ_T0073468.1 MGP_CBAJ_G0029661.1 mouse_genomes_project 5 132547660 132561321 + MGP_CBAJ_P0073468 Tbx3 protein_coding protein_coding MGP_CBAJ_T0073469.1 MGP_CBAJ_G0029661.1 mouse_genomes_project 5 132552075 132557242 + Tbx3 protein_coding retained_intron MGP_CBAJ_T0073470.1 MGP_CBAJ_G0029661.1 mouse_genomes_project 5 132556860 132557444 + Tbx3 protein_coding processed_transcript MGP_CBAJ_T0075448.1 MGP_CBAJ_G0030032.1 mouse_genomes_project 5 162662399 162668368 + MGP_CBAJ_P0075448 protein_coding protein_coding MGP_CBAJ_T0075449.1 MGP_CBAJ_G0030032.1 mouse_genomes_project 5 162662516 162678280 + MGP_CBAJ_P0075449 protein_coding unknown_likely_coding MGP_CBAJ_T0075450.1 MGP_CBAJ_G0030032.1 mouse_genomes_project 5 162665257 162678398 + MGP_CBAJ_P0075450 protein_coding nonsense_mediated_decay MGP_CBAJ_T0008146.1 MGP_CBAJ_G0006627.1 mouse_genomes_project 5 116271831 116282881 + Gm32736 lincRNA lincRNA MGP_CBAJ_T0014749.1 MGP_CBAJ_G0012861.1 mouse_genomes_project 5 52010583 52012450 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0071638.1 MGP_CBAJ_G0029279.1 mouse_genomes_project 5 77442246 77453859 - MGP_CBAJ_P0071638 Commd8 protein_coding protein_coding MGP_CBAJ_T0071639.1 MGP_CBAJ_G0029279.1 mouse_genomes_project 5 77442856 77453834 - MGP_CBAJ_P0071639 Commd8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071640.1 MGP_CBAJ_G0029279.1 mouse_genomes_project 5 77444682 77446810 - Commd8 protein_coding retained_intron MGP_CBAJ_T0071641.1 MGP_CBAJ_G0029279.1 mouse_genomes_project 5 77445547 77451390 - Commd8 protein_coding processed_transcript MGP_CBAJ_T0071642.1 MGP_CBAJ_G0029279.1 mouse_genomes_project 5 77446633 77453826 - MGP_CBAJ_P0071642 Commd8 protein_coding protein_coding MGP_CBAJ_T0008023.1 MGP_CBAJ_G0006531.1 mouse_genomes_project 5 47213995 47280140 - Gm43303 lincRNA lincRNA MGP_CBAJ_T0004579.1 MGP_CBAJ_G0003963.1 mouse_genomes_project 5 34957947 34980461 + 4930557J02Rik antisense antisense MGP_CBAJ_T0074492.1 MGP_CBAJ_G0029837.1 mouse_genomes_project 5 150463430 150468797 - MGP_CBAJ_P0074492 Vps37d protein_coding protein_coding MGP_CBAJ_T0074493.1 MGP_CBAJ_G0029837.1 mouse_genomes_project 5 150463433 150468797 - MGP_CBAJ_P0074493 Vps37d protein_coding protein_coding MGP_CBAJ_T0100609.1 MGP_CBAJ_G0038864.1 mouse_genomes_project 5 62059832 62059966 + Gm22536 snoRNA snoRNA MGP_CBAJ_T0014898.1 MGP_CBAJ_G0013010.1 mouse_genomes_project 5 120418192 120420207 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008056.1 MGP_CBAJ_G0006559.1 mouse_genomes_project 5 77997675 77999822 + 4933408A14Rik lincRNA lincRNA MGP_CBAJ_T0008045.1 MGP_CBAJ_G0006552.1 mouse_genomes_project 5 68871209 68878118 + C030018K13Rik lincRNA lincRNA MGP_CBAJ_T0008046.1 MGP_CBAJ_G0006552.1 mouse_genomes_project 5 68871215 68873930 + C030018K13Rik lincRNA lincRNA MGP_CBAJ_T0008047.1 MGP_CBAJ_G0006552.1 mouse_genomes_project 5 68871236 68876616 + C030018K13Rik lincRNA lincRNA MGP_CBAJ_T0001779.1 MGP_CBAJ_G0001697.1 mouse_genomes_project 5 137235004 137237137 + TEC TEC MGP_CBAJ_T0073144.1 MGP_CBAJ_G0029600.1 mouse_genomes_project 5 126283698 126324966 + MGP_CBAJ_P0073144 Ube3b protein_coding protein_coding MGP_CBAJ_T0073145.1 MGP_CBAJ_G0029600.1 mouse_genomes_project 5 126283917 126324965 + MGP_CBAJ_P0073145 Ube3b protein_coding nonsense_mediated_decay MGP_CBAJ_T0073146.1 MGP_CBAJ_G0029600.1 mouse_genomes_project 5 126283924 126295981 + MGP_CBAJ_P0073146 Ube3b protein_coding nonsense_mediated_decay MGP_CBAJ_T0073147.1 MGP_CBAJ_G0029600.1 mouse_genomes_project 5 126302575 126324965 + MGP_CBAJ_P0073147 Ube3b protein_coding nonsense_mediated_decay MGP_CBAJ_T0073148.1 MGP_CBAJ_G0029600.1 mouse_genomes_project 5 126306516 126314927 + Ube3b protein_coding processed_transcript MGP_CBAJ_T0001695.1 MGP_CBAJ_G0001613.1 mouse_genomes_project 5 111384510 111387104 + TEC TEC MGP_CBAJ_T0007983.1 MGP_CBAJ_G0006504.1 mouse_genomes_project 5 34036985 34063672 - Gm20465 lincRNA lincRNA MGP_CBAJ_T0008180.1 MGP_CBAJ_G0006649.1 mouse_genomes_project 5 123025144 123025813 + Gm42489 lincRNA lincRNA MGP_CBAJ_T0071903.1 MGP_CBAJ_G0029325.1 mouse_genomes_project 5 83289541 83315599 + MGP_CBAJ_P0071903 Rest protein_coding protein_coding MGP_CBAJ_T0071904.1 MGP_CBAJ_G0029325.1 mouse_genomes_project 5 83290246 83315599 + MGP_CBAJ_P0071904 Rest protein_coding protein_coding MGP_CBAJ_T0072971.1 MGP_CBAJ_G0029567.1 mouse_genomes_project 5 123879232 123890893 + MGP_CBAJ_P0072971 Tfip11 protein_coding protein_coding MGP_CBAJ_T0072972.1 MGP_CBAJ_G0029567.1 mouse_genomes_project 5 123879295 123884779 + MGP_CBAJ_P0072972 Tfip11 protein_coding protein_coding MGP_CBAJ_T0072973.1 MGP_CBAJ_G0029567.1 mouse_genomes_project 5 123879366 123881057 + MGP_CBAJ_P0072973 Tfip11 protein_coding protein_coding MGP_CBAJ_T0072974.1 MGP_CBAJ_G0029567.1 mouse_genomes_project 5 123888462 123890093 + Tfip11 protein_coding retained_intron MGP_CBAJ_T0010609.1 MGP_CBAJ_G0008747.1 mouse_genomes_project 5 154950796 154950879 + Gm24082 miRNA miRNA MGP_CBAJ_T0072072.1 MGP_CBAJ_G0029365.1 mouse_genomes_project 5 95527184 95567151 + MGP_CBAJ_P0072072 Gm28434 protein_coding protein_coding MGP_CBAJ_T0014963.1 MGP_CBAJ_G0013075.1 mouse_genomes_project 5 159128434 159129398 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010604.1 MGP_CBAJ_G0008742.1 mouse_genomes_project 5 153131034 153131099 - Mir7036 miRNA miRNA MGP_CBAJ_T0001478.1 MGP_CBAJ_G0001399.1 mouse_genomes_project 5 39283041 39283336 - TEC TEC MGP_CBAJ_T0014987.1 MGP_CBAJ_G0013099.1 mouse_genomes_project 5 165298394 165302582 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008315.1 MGP_CBAJ_G0006735.1 mouse_genomes_project 5 153401483 153408732 + Gm8066 lincRNA lincRNA MGP_CBAJ_T0074701.1 MGP_CBAJ_G0029875.1 mouse_genomes_project 5 152676071 152689457 + MGP_CBAJ_P0074701 Cldn15 protein_coding protein_coding MGP_CBAJ_T0074702.1 MGP_CBAJ_G0029875.1 mouse_genomes_project 5 152677319 152689443 + MGP_CBAJ_P0074702 Cldn15 protein_coding protein_coding MGP_CBAJ_T0074703.1 MGP_CBAJ_G0029875.1 mouse_genomes_project 5 152687554 152688612 + Cldn15 protein_coding processed_transcript MGP_CBAJ_T0017884.1 MGP_CBAJ_G0015339.1 mouse_genomes_project 5 54918670 54922493 + 9230114K14Rik processed_transcript lincRNA MGP_CBAJ_T0017885.1 MGP_CBAJ_G0015339.1 mouse_genomes_project 5 54918677 54925970 + 9230114K14Rik processed_transcript retained_intron MGP_CBAJ_T0017886.1 MGP_CBAJ_G0015339.1 mouse_genomes_project 5 54918677 55020005 + 9230114K14Rik processed_transcript lincRNA MGP_CBAJ_T0017887.1 MGP_CBAJ_G0015339.1 mouse_genomes_project 5 54918711 54983506 + 9230114K14Rik processed_transcript lincRNA MGP_CBAJ_T0072061.1 MGP_CBAJ_G0029361.1 mouse_genomes_project 5 95351462 95377968 + MGP_CBAJ_P0072061 Prr27 protein_coding protein_coding MGP_CBAJ_T0072062.1 MGP_CBAJ_G0029361.1 mouse_genomes_project 5 95351462 95377968 + MGP_CBAJ_P0072062 Prr27 protein_coding protein_coding MGP_CBAJ_T0072955.1 MGP_CBAJ_G0029562.1 mouse_genomes_project 5 122813958 122814670 + Mn1 protein_coding processed_transcript MGP_CBAJ_T0072956.1 MGP_CBAJ_G0029562.1 mouse_genomes_project 5 122814038 122859585 + MGP_CBAJ_P0072956 Mn1 protein_coding protein_coding MGP_CBAJ_T0100614.1 MGP_CBAJ_G0038869.1 mouse_genomes_project 5 68480610 68480744 + Gm22559 snoRNA snoRNA MGP_CBAJ_T0004711.1 MGP_CBAJ_G0004061.1 mouse_genomes_project 5 128392791 128402657 + antisense antisense MGP_CBAJ_T0072078.1 MGP_CBAJ_G0029370.1 mouse_genomes_project 5 95904272 95904353 - MGP_CBAJ_P0072078 Gm11115 protein_coding protein_coding MGP_CBAJ_T0008317.1 MGP_CBAJ_G0006737.1 mouse_genomes_project 5 154230634 154234546 - Gm454 lincRNA lincRNA MGP_CBAJ_T0010541.1 MGP_CBAJ_G0008679.1 mouse_genomes_project 5 12190221 12190326 - Gm24054 miRNA miRNA MGP_CBAJ_T0100606.1 MGP_CBAJ_G0038861.1 mouse_genomes_project 5 60145651 60145781 + Gm23896 snoRNA snoRNA MGP_CBAJ_T0008236.1 MGP_CBAJ_G0006687.1 mouse_genomes_project 5 132514553 132529871 + Gm16064 lincRNA lincRNA MGP_CBAJ_T0071831.1 MGP_CBAJ_G0029314.1 mouse_genomes_project 5 82409997 82450848 + MGP_CBAJ_P0071831 Exoc1 protein_coding protein_coding MGP_CBAJ_T0071832.1 MGP_CBAJ_G0029314.1 mouse_genomes_project 5 82410009 82450839 + MGP_CBAJ_P0071832 Exoc1 protein_coding protein_coding MGP_CBAJ_T0071833.1 MGP_CBAJ_G0029314.1 mouse_genomes_project 5 82410014 82420422 + Exoc1 protein_coding retained_intron MGP_CBAJ_T0071834.1 MGP_CBAJ_G0029314.1 mouse_genomes_project 5 82410030 82442418 + Exoc1 protein_coding processed_transcript MGP_CBAJ_T0071835.1 MGP_CBAJ_G0029314.1 mouse_genomes_project 5 82410044 82421795 + Exoc1 protein_coding retained_intron MGP_CBAJ_T0071836.1 MGP_CBAJ_G0029314.1 mouse_genomes_project 5 82410044 82450841 + MGP_CBAJ_P0071836 Exoc1 protein_coding protein_coding MGP_CBAJ_T0071837.1 MGP_CBAJ_G0029314.1 mouse_genomes_project 5 82422630 82430202 + Exoc1 protein_coding retained_intron MGP_CBAJ_T0071838.1 MGP_CBAJ_G0029314.1 mouse_genomes_project 5 82433329 82436250 + Exoc1 protein_coding retained_intron MGP_CBAJ_T0071839.1 MGP_CBAJ_G0029314.1 mouse_genomes_project 5 82440984 82447757 + Exoc1 protein_coding retained_intron MGP_CBAJ_T0071840.1 MGP_CBAJ_G0029314.1 mouse_genomes_project 5 82441851 82448570 + Exoc1 protein_coding retained_intron MGP_CBAJ_T0071841.1 MGP_CBAJ_G0029314.1 mouse_genomes_project 5 82441989 82447518 + MGP_CBAJ_P0071841 Exoc1 protein_coding protein_coding MGP_CBAJ_T0071842.1 MGP_CBAJ_G0029314.1 mouse_genomes_project 5 82448435 82450543 + Exoc1 protein_coding retained_intron MGP_CBAJ_T0074894.1 MGP_CBAJ_G0029913.1 mouse_genomes_project 5 153876112 153904736 - MGP_CBAJ_P0074894 Cyp3a13 protein_coding protein_coding MGP_CBAJ_T0071200.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50289094 50642411 + MGP_CBAJ_P0071200 Slit2 protein_coding protein_coding MGP_CBAJ_T0071201.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50289110 50296245 + Slit2 protein_coding retained_intron MGP_CBAJ_T0071202.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50289110 50504029 + Slit2 protein_coding retained_intron MGP_CBAJ_T0071203.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50289110 50638699 + MGP_CBAJ_P0071203 Slit2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071204.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50289110 50640188 + MGP_CBAJ_P0071204 Slit2 protein_coding protein_coding MGP_CBAJ_T0071205.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50289110 50640188 + MGP_CBAJ_P0071205 Slit2 protein_coding protein_coding MGP_CBAJ_T0071206.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50289110 50640188 + MGP_CBAJ_P0071206 Slit2 protein_coding protein_coding MGP_CBAJ_T0071207.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50289114 50394537 + Slit2 protein_coding processed_transcript MGP_CBAJ_T0071208.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50289133 50291625 + Slit2 protein_coding retained_intron MGP_CBAJ_T0071209.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50290950 50494129 + Slit2 protein_coding processed_transcript MGP_CBAJ_T0071210.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50290996 50638544 + MGP_CBAJ_P0071210 Slit2 protein_coding unknown_likely_coding MGP_CBAJ_T0071211.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50293794 50513015 + MGP_CBAJ_P0071211 Slit2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071212.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50487134 50514221 + Slit2 protein_coding processed_transcript MGP_CBAJ_T0071213.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50495132 50499902 + Slit2 protein_coding retained_intron MGP_CBAJ_T0071214.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50502972 50545562 + Slit2 protein_coding retained_intron MGP_CBAJ_T0071215.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50510338 50558247 + Slit2 protein_coding processed_transcript MGP_CBAJ_T0071216.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50549122 50570728 + Slit2 protein_coding processed_transcript MGP_CBAJ_T0071217.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50563760 50617252 + Slit2 protein_coding retained_intron MGP_CBAJ_T0071218.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50570776 50591777 + MGP_CBAJ_P0071218 Slit2 protein_coding protein_coding MGP_CBAJ_T0071219.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50577291 50580163 + Slit2 protein_coding retained_intron MGP_CBAJ_T0071220.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50580727 50594862 + Slit2 protein_coding retained_intron MGP_CBAJ_T0071221.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50588783 50591731 + Slit2 protein_coding retained_intron MGP_CBAJ_T0071222.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50609652 50616104 + Slit2 protein_coding retained_intron MGP_CBAJ_T0071223.1 MGP_CBAJ_G0029207.1 mouse_genomes_project 5 50616082 50636815 + MGP_CBAJ_P0071223 Slit2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071296.1 MGP_CBAJ_G0029221.1 mouse_genomes_project 5 55948985 56062901 - MGP_CBAJ_P0071296 Sel1l3 protein_coding protein_coding MGP_CBAJ_T0071297.1 MGP_CBAJ_G0029221.1 mouse_genomes_project 5 55987536 56062764 - Sel1l3 protein_coding retained_intron MGP_CBAJ_T0071298.1 MGP_CBAJ_G0029221.1 mouse_genomes_project 5 55995611 55998986 - Sel1l3 protein_coding retained_intron MGP_CBAJ_T0071299.1 MGP_CBAJ_G0029221.1 mouse_genomes_project 5 55997900 56015405 - Sel1l3 protein_coding processed_transcript MGP_CBAJ_T0071300.1 MGP_CBAJ_G0029221.1 mouse_genomes_project 5 56047678 56067852 - Sel1l3 protein_coding retained_intron MGP_CBAJ_T0004591.1 MGP_CBAJ_G0003975.1 mouse_genomes_project 5 40039990 40052787 + Clnkos antisense antisense MGP_CBAJ_T0004592.1 MGP_CBAJ_G0003975.1 mouse_genomes_project 5 40039991 40052787 + Clnkos antisense antisense MGP_CBAJ_T0017866.1 MGP_CBAJ_G0015333.1 mouse_genomes_project 5 30861456 30879558 - Gm9899 processed_transcript lincRNA MGP_CBAJ_T0017867.1 MGP_CBAJ_G0015333.1 mouse_genomes_project 5 30864936 30865495 - Gm9899 processed_transcript pseudogene MGP_CBAJ_T0017868.1 MGP_CBAJ_G0015333.1 mouse_genomes_project 5 30865418 30867325 - Gm9899 processed_transcript retained_intron MGP_CBAJ_T0004629.1 MGP_CBAJ_G0004003.1 mouse_genomes_project 5 72767284 72778311 - 4930425K10Rik antisense antisense MGP_CBAJ_T0070299.1 MGP_CBAJ_G0029063.1 mouse_genomes_project 5 31176807 31187976 + MGP_CBAJ_P0070299 Tmem214 protein_coding protein_coding MGP_CBAJ_T0070300.1 MGP_CBAJ_G0029063.1 mouse_genomes_project 5 31178426 31185840 + MGP_CBAJ_P0070300 Tmem214 protein_coding protein_coding MGP_CBAJ_T0070301.1 MGP_CBAJ_G0029063.1 mouse_genomes_project 5 31178428 31187160 + Tmem214 protein_coding retained_intron MGP_CBAJ_T0070302.1 MGP_CBAJ_G0029063.1 mouse_genomes_project 5 31178430 31186264 + Tmem214 protein_coding retained_intron MGP_CBAJ_T0070303.1 MGP_CBAJ_G0029063.1 mouse_genomes_project 5 31179159 31180281 + Tmem214 protein_coding retained_intron MGP_CBAJ_T0070304.1 MGP_CBAJ_G0029063.1 mouse_genomes_project 5 31180568 31182390 + Tmem214 protein_coding processed_transcript MGP_CBAJ_T0070305.1 MGP_CBAJ_G0029063.1 mouse_genomes_project 5 31180613 31186259 + Tmem214 protein_coding retained_intron MGP_CBAJ_T0010586.1 MGP_CBAJ_G0008724.1 mouse_genomes_project 5 131061654 131061746 - Gm26455 miRNA miRNA MGP_CBAJ_T0010602.1 MGP_CBAJ_G0008740.1 mouse_genomes_project 5 152708316 152708425 + Mir702 miRNA miRNA MGP_CBAJ_T0073964.1 MGP_CBAJ_G0029748.1 mouse_genomes_project 5 137903702 137945249 + MGP_CBAJ_P0073964 Hip1r protein_coding protein_coding MGP_CBAJ_T0073965.1 MGP_CBAJ_G0029748.1 mouse_genomes_project 5 137913151 137922880 + MGP_CBAJ_P0073965 Hip1r protein_coding protein_coding MGP_CBAJ_T0073966.1 MGP_CBAJ_G0029748.1 mouse_genomes_project 5 137930239 137937090 + MGP_CBAJ_P0073966 Hip1r protein_coding nonsense_mediated_decay MGP_CBAJ_T0073967.1 MGP_CBAJ_G0029748.1 mouse_genomes_project 5 137939100 137940698 + Hip1r protein_coding retained_intron MGP_CBAJ_T0073968.1 MGP_CBAJ_G0029748.1 mouse_genomes_project 5 137939476 137941353 + MGP_CBAJ_P0073968 Hip1r protein_coding nonsense_mediated_decay MGP_CBAJ_T0073969.1 MGP_CBAJ_G0029748.1 mouse_genomes_project 5 137940073 137941379 + Hip1r protein_coding retained_intron MGP_CBAJ_T0073970.1 MGP_CBAJ_G0029748.1 mouse_genomes_project 5 137940289 137941365 + Hip1r protein_coding retained_intron MGP_CBAJ_T0004767.1 MGP_CBAJ_G0004100.1 mouse_genomes_project 5 149704299 149706340 + Gm42882 antisense antisense MGP_CBAJ_T0073336.1 MGP_CBAJ_G0029638.1 mouse_genomes_project 5 127819186 127834969 + MGP_CBAJ_P0073336 Rab35 protein_coding protein_coding MGP_CBAJ_T0073337.1 MGP_CBAJ_G0029638.1 mouse_genomes_project 5 127819422 127833352 + MGP_CBAJ_P0073337 Rab35 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074564.1 MGP_CBAJ_G0029852.1 mouse_genomes_project 5 151206618 151215582 - MGP_CBAJ_P0074564 Tmem120a protein_coding protein_coding MGP_CBAJ_T0074565.1 MGP_CBAJ_G0029852.1 mouse_genomes_project 5 151206637 151207724 - Tmem120a protein_coding retained_intron MGP_CBAJ_T0074566.1 MGP_CBAJ_G0029852.1 mouse_genomes_project 5 151206671 151208370 - Tmem120a protein_coding processed_transcript MGP_CBAJ_T0074567.1 MGP_CBAJ_G0029852.1 mouse_genomes_project 5 151207388 151213533 - Tmem120a protein_coding retained_intron MGP_CBAJ_T0074568.1 MGP_CBAJ_G0029852.1 mouse_genomes_project 5 151208341 151215342 - MGP_CBAJ_P0074568 Tmem120a protein_coding protein_coding MGP_CBAJ_T0072563.1 MGP_CBAJ_G0029484.1 mouse_genomes_project 5 114337572 114382188 + MGP_CBAJ_P0072563 Pkd2 protein_coding protein_coding MGP_CBAJ_T0072564.1 MGP_CBAJ_G0029484.1 mouse_genomes_project 5 114337692 114366246 + Pkd2 protein_coding processed_transcript MGP_CBAJ_T0072565.1 MGP_CBAJ_G0029484.1 mouse_genomes_project 5 114368694 114377195 + Pkd2 protein_coding retained_intron MGP_CBAJ_T0004692.1 MGP_CBAJ_G0004048.1 mouse_genomes_project 5 122122918 122133527 + Gm15559 antisense antisense MGP_CBAJ_T0072610.1 MGP_CBAJ_G0029497.1 mouse_genomes_project 5 116855890 116918173 - MGP_CBAJ_P0072610 Zfp644 protein_coding unknown_likely_coding MGP_CBAJ_T0072611.1 MGP_CBAJ_G0029497.1 mouse_genomes_project 5 116855896 116941833 - MGP_CBAJ_P0072611 Zfp644 protein_coding protein_coding MGP_CBAJ_T0072612.1 MGP_CBAJ_G0029497.1 mouse_genomes_project 5 116855897 116942688 - MGP_CBAJ_P0072612 Zfp644 protein_coding protein_coding MGP_CBAJ_T0072613.1 MGP_CBAJ_G0029497.1 mouse_genomes_project 5 116855899 116942455 - MGP_CBAJ_P0072613 Zfp644 protein_coding protein_coding MGP_CBAJ_T0072614.1 MGP_CBAJ_G0029497.1 mouse_genomes_project 5 116856228 116863536 - Zfp644 protein_coding processed_transcript MGP_CBAJ_T0072615.1 MGP_CBAJ_G0029497.1 mouse_genomes_project 5 116857119 116942663 - Zfp644 protein_coding processed_transcript MGP_CBAJ_T0072616.1 MGP_CBAJ_G0029497.1 mouse_genomes_project 5 116875989 116942684 - MGP_CBAJ_P0072616 Zfp644 protein_coding protein_coding MGP_CBAJ_T0072617.1 MGP_CBAJ_G0029497.1 mouse_genomes_project 5 116877000 116942422 - MGP_CBAJ_P0072617 Zfp644 protein_coding protein_coding MGP_CBAJ_T0072618.1 MGP_CBAJ_G0029497.1 mouse_genomes_project 5 116877227 116906744 - MGP_CBAJ_P0072618 Zfp644 protein_coding protein_coding MGP_CBAJ_T0072619.1 MGP_CBAJ_G0029497.1 mouse_genomes_project 5 116877395 116942508 - MGP_CBAJ_P0072619 Zfp644 protein_coding protein_coding MGP_CBAJ_T0072620.1 MGP_CBAJ_G0029497.1 mouse_genomes_project 5 116877442 116942422 - MGP_CBAJ_P0072620 Zfp644 protein_coding protein_coding MGP_CBAJ_T0072621.1 MGP_CBAJ_G0029497.1 mouse_genomes_project 5 116877585 116942508 - MGP_CBAJ_P0072621 Zfp644 protein_coding protein_coding MGP_CBAJ_T0072622.1 MGP_CBAJ_G0029497.1 mouse_genomes_project 5 116929816 116940876 - Zfp644 protein_coding retained_intron MGP_CBAJ_T0072623.1 MGP_CBAJ_G0029497.1 mouse_genomes_project 5 116933131 116942024 - Zfp644 protein_coding retained_intron MGP_CBAJ_T0072624.1 MGP_CBAJ_G0029497.1 mouse_genomes_project 5 116933902 116942404 - Zfp644 protein_coding processed_transcript MGP_CBAJ_T0072625.1 MGP_CBAJ_G0029497.1 mouse_genomes_project 5 116933915 116942402 - Zfp644 protein_coding processed_transcript MGP_CBAJ_T0072626.1 MGP_CBAJ_G0029497.1 mouse_genomes_project 5 116940907 116943145 - Zfp644 protein_coding processed_transcript MGP_CBAJ_T0072627.1 MGP_CBAJ_G0029497.1 mouse_genomes_project 5 116941212 116941870 - Zfp644 protein_coding processed_transcript MGP_CBAJ_T0069585.1 MGP_CBAJ_G0028927.1 mouse_genomes_project 5 792404 836514 + Krit1 protein_coding retained_intron MGP_CBAJ_T0069586.1 MGP_CBAJ_G0028927.1 mouse_genomes_project 5 792404 836589 + MGP_CBAJ_P0069586 Krit1 protein_coding protein_coding MGP_CBAJ_T0069587.1 MGP_CBAJ_G0028927.1 mouse_genomes_project 5 792405 800932 + Krit1 protein_coding retained_intron MGP_CBAJ_T0069588.1 MGP_CBAJ_G0028927.1 mouse_genomes_project 5 792409 836589 + MGP_CBAJ_P0069588 Krit1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0069589.1 MGP_CBAJ_G0028927.1 mouse_genomes_project 5 792410 840794 + MGP_CBAJ_P0069589 Krit1 protein_coding protein_coding MGP_CBAJ_T0069590.1 MGP_CBAJ_G0028927.1 mouse_genomes_project 5 792625 839533 + MGP_CBAJ_P0069590 Krit1 protein_coding protein_coding MGP_CBAJ_T0069591.1 MGP_CBAJ_G0028927.1 mouse_genomes_project 5 793460 798925 + MGP_CBAJ_P0069591 Krit1 protein_coding protein_coding MGP_CBAJ_T0069592.1 MGP_CBAJ_G0028927.1 mouse_genomes_project 5 794513 800725 + Krit1 protein_coding retained_intron MGP_CBAJ_T0069593.1 MGP_CBAJ_G0028927.1 mouse_genomes_project 5 801993 807818 + Krit1 protein_coding retained_intron MGP_CBAJ_T0069594.1 MGP_CBAJ_G0028927.1 mouse_genomes_project 5 804906 809194 + Krit1 protein_coding retained_intron MGP_CBAJ_T0069595.1 MGP_CBAJ_G0028927.1 mouse_genomes_project 5 812399 814313 + Krit1 protein_coding retained_intron MGP_CBAJ_T0074704.1 MGP_CBAJ_G0029876.1 mouse_genomes_project 5 152699058 152704903 - MGP_CBAJ_P0074704 Znhit1 protein_coding protein_coding MGP_CBAJ_T0074705.1 MGP_CBAJ_G0029876.1 mouse_genomes_project 5 152699083 152703707 - MGP_CBAJ_P0074705 Znhit1 protein_coding protein_coding MGP_CBAJ_T0074706.1 MGP_CBAJ_G0029876.1 mouse_genomes_project 5 152699088 152703704 - MGP_CBAJ_P0074706 Znhit1 protein_coding protein_coding MGP_CBAJ_T0074707.1 MGP_CBAJ_G0029876.1 mouse_genomes_project 5 152699215 152704107 - MGP_CBAJ_P0074707 Znhit1 protein_coding protein_coding MGP_CBAJ_T0074708.1 MGP_CBAJ_G0029876.1 mouse_genomes_project 5 152699793 152704383 - MGP_CBAJ_P0074708 Znhit1 protein_coding protein_coding MGP_CBAJ_T0011463.1 MGP_CBAJ_G0009601.1 mouse_genomes_project 5 24919547 24919830 - Gm26356 misc_RNA misc_RNA MGP_CBAJ_T0014677.1 MGP_CBAJ_G0012789.1 mouse_genomes_project 5 22297415 22300417 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0074764.1 MGP_CBAJ_G0029888.1 mouse_genomes_project 5 153148983 153176356 - MGP_CBAJ_P0074764 Slc12a9 protein_coding protein_coding MGP_CBAJ_T0074765.1 MGP_CBAJ_G0029888.1 mouse_genomes_project 5 153155464 153156903 - Slc12a9 protein_coding retained_intron MGP_CBAJ_T0074766.1 MGP_CBAJ_G0029888.1 mouse_genomes_project 5 153171426 153176356 - Slc12a9 protein_coding retained_intron MGP_CBAJ_T0074767.1 MGP_CBAJ_G0029888.1 mouse_genomes_project 5 153175033 153175769 - MGP_CBAJ_P0074767 Slc12a9 protein_coding protein_coding MGP_CBAJ_T0001464.1 MGP_CBAJ_G0001385.1 mouse_genomes_project 5 33464631 33465792 - TEC TEC MGP_CBAJ_T0014849.1 MGP_CBAJ_G0012961.1 mouse_genomes_project 5 99862258 99862633 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0014901.1 MGP_CBAJ_G0013013.1 mouse_genomes_project 5 121635122 121635441 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004659.1 MGP_CBAJ_G0004026.1 mouse_genomes_project 5 108882880 108884107 + 4930405H06Rik antisense antisense MGP_CBAJ_T0074975.1 MGP_CBAJ_G0029934.1 mouse_genomes_project 5 154480012 154490366 + MGP_CBAJ_P0074975 Stag3 protein_coding protein_coding MGP_CBAJ_T0074976.1 MGP_CBAJ_G0029934.1 mouse_genomes_project 5 154480281 154515432 + Stag3 protein_coding retained_intron MGP_CBAJ_T0074977.1 MGP_CBAJ_G0029934.1 mouse_genomes_project 5 154480298 154515429 + Stag3 protein_coding retained_intron MGP_CBAJ_T0074978.1 MGP_CBAJ_G0029934.1 mouse_genomes_project 5 154480298 154515432 + MGP_CBAJ_P0074978 Stag3 protein_coding protein_coding MGP_CBAJ_T0074979.1 MGP_CBAJ_G0029934.1 mouse_genomes_project 5 154480316 154515432 + MGP_CBAJ_P0074979 Stag3 protein_coding protein_coding MGP_CBAJ_T0074980.1 MGP_CBAJ_G0029934.1 mouse_genomes_project 5 154480328 154490021 + MGP_CBAJ_P0074980 Stag3 protein_coding protein_coding MGP_CBAJ_T0074981.1 MGP_CBAJ_G0029934.1 mouse_genomes_project 5 154498772 154501038 + Stag3 protein_coding processed_transcript MGP_CBAJ_T0074982.1 MGP_CBAJ_G0029934.1 mouse_genomes_project 5 154503955 154511602 + MGP_CBAJ_P0074982 Stag3 protein_coding protein_coding MGP_CBAJ_T0074983.1 MGP_CBAJ_G0029934.1 mouse_genomes_project 5 154511556 154515425 + MGP_CBAJ_P0074983 Stag3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075062.1 MGP_CBAJ_G0029948.1 mouse_genomes_project 5 155813599 155815593 + Cyp2w1 protein_coding retained_intron MGP_CBAJ_T0075063.1 MGP_CBAJ_G0029948.1 mouse_genomes_project 5 155813599 155818004 + MGP_CBAJ_P0075063 Cyp2w1 protein_coding protein_coding MGP_CBAJ_T0075064.1 MGP_CBAJ_G0029948.1 mouse_genomes_project 5 155815546 155817638 + MGP_CBAJ_P0075064 Cyp2w1 protein_coding protein_coding MGP_CBAJ_T0072609.1 MGP_CBAJ_G0029496.1 mouse_genomes_project 5 116848283 116848387 + MGP_CBAJ_P0072609 Gm17304 protein_coding protein_coding MGP_CBAJ_T0071992.1 MGP_CBAJ_G0029343.1 mouse_genomes_project 5 94194066 94233729 + MGP_CBAJ_P0071992 Ythdc1 protein_coding protein_coding MGP_CBAJ_T0071993.1 MGP_CBAJ_G0029343.1 mouse_genomes_project 5 94194078 94233734 + MGP_CBAJ_P0071993 Ythdc1 protein_coding protein_coding MGP_CBAJ_T0071994.1 MGP_CBAJ_G0029343.1 mouse_genomes_project 5 94194341 94233734 + MGP_CBAJ_P0071994 Ythdc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0071995.1 MGP_CBAJ_G0029343.1 mouse_genomes_project 5 94194409 94221294 + MGP_CBAJ_P0071995 Ythdc1 protein_coding unknown_likely_coding MGP_CBAJ_T0071996.1 MGP_CBAJ_G0029343.1 mouse_genomes_project 5 94194409 94233732 + MGP_CBAJ_P0071996 Ythdc1 protein_coding protein_coding MGP_CBAJ_T0071997.1 MGP_CBAJ_G0029343.1 mouse_genomes_project 5 94196251 94202958 + Ythdc1 protein_coding retained_intron MGP_CBAJ_T0071998.1 MGP_CBAJ_G0029343.1 mouse_genomes_project 5 94208780 94233734 + Ythdc1 protein_coding retained_intron MGP_CBAJ_T0071999.1 MGP_CBAJ_G0029343.1 mouse_genomes_project 5 94216305 94221454 + Ythdc1 protein_coding retained_intron MGP_CBAJ_T0072000.1 MGP_CBAJ_G0029343.1 mouse_genomes_project 5 94222438 94229630 + Ythdc1 protein_coding processed_transcript MGP_CBAJ_T0072001.1 MGP_CBAJ_G0029343.1 mouse_genomes_project 5 94224883 94233732 + Ythdc1 protein_coding retained_intron MGP_CBAJ_T0075451.1 MGP_CBAJ_G0030033.1 mouse_genomes_project 5 162735354 163686207 + MGP_CBAJ_P0075451 Cyp3a57 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075452.1 MGP_CBAJ_G0030033.1 mouse_genomes_project 5 162735362 163686621 + MGP_CBAJ_P0075452 Cyp3a57 protein_coding protein_coding MGP_CBAJ_T0070678.1 MGP_CBAJ_G0029120.1 mouse_genomes_project 5 34539864 34588086 - MGP_CBAJ_P0070678 Letm1 protein_coding protein_coding MGP_CBAJ_T0070679.1 MGP_CBAJ_G0029120.1 mouse_genomes_project 5 34542725 34553855 - Letm1 protein_coding retained_intron MGP_CBAJ_T0070680.1 MGP_CBAJ_G0029120.1 mouse_genomes_project 5 34566985 34583917 - MGP_CBAJ_P0070680 Letm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0070681.1 MGP_CBAJ_G0029120.1 mouse_genomes_project 5 34574631 34587983 - Letm1 protein_coding processed_transcript MGP_CBAJ_T0070682.1 MGP_CBAJ_G0029120.1 mouse_genomes_project 5 34574830 34575723 - Letm1 protein_coding processed_transcript MGP_CBAJ_T0070683.1 MGP_CBAJ_G0029120.1 mouse_genomes_project 5 34581727 34588006 - MGP_CBAJ_P0070683 Letm1 protein_coding protein_coding MGP_CBAJ_T0071086.1 MGP_CBAJ_G0029186.1 mouse_genomes_project 5 43463167 43526491 - MGP_CBAJ_P0071086 Bod1l protein_coding protein_coding MGP_CBAJ_T0071087.1 MGP_CBAJ_G0029186.1 mouse_genomes_project 5 43463167 43526491 - MGP_CBAJ_P0071087 Bod1l protein_coding protein_coding MGP_CBAJ_T0071088.1 MGP_CBAJ_G0029186.1 mouse_genomes_project 5 43503788 43506208 - Bod1l protein_coding processed_transcript MGP_CBAJ_T0071089.1 MGP_CBAJ_G0029186.1 mouse_genomes_project 5 43504680 43526468 - Bod1l protein_coding retained_intron MGP_CBAJ_T0098424.1 MGP_CBAJ_G0036689.1 mouse_genomes_project 5 159864421 159868718 - D430018E03Rik sense_intronic sense_intronic MGP_CBAJ_T0073441.1 MGP_CBAJ_G0029655.1 mouse_genomes_project 5 130618150 130655847 + MGP_CBAJ_P0073441 Tesc protein_coding protein_coding MGP_CBAJ_T0073442.1 MGP_CBAJ_G0029655.1 mouse_genomes_project 5 130618172 130655814 + MGP_CBAJ_P0073442 Tesc protein_coding nonsense_mediated_decay MGP_CBAJ_T0073443.1 MGP_CBAJ_G0029655.1 mouse_genomes_project 5 130618277 130655839 + Tesc protein_coding retained_intron MGP_CBAJ_T0073444.1 MGP_CBAJ_G0029655.1 mouse_genomes_project 5 130628352 130655742 + Tesc protein_coding processed_transcript MGP_CBAJ_T0073445.1 MGP_CBAJ_G0029655.1 mouse_genomes_project 5 130635592 130647648 + Tesc protein_coding processed_transcript MGP_CBAJ_T0073446.1 MGP_CBAJ_G0029655.1 mouse_genomes_project 5 130635593 130640478 + Tesc protein_coding processed_transcript MGP_CBAJ_T0073617.1 MGP_CBAJ_G0029698.1 mouse_genomes_project 5 135015482 135092939 - MGP_CBAJ_P0073617 Acad10 protein_coding protein_coding MGP_CBAJ_T0073618.1 MGP_CBAJ_G0029698.1 mouse_genomes_project 5 135015484 135092974 - MGP_CBAJ_P0073618 Acad10 protein_coding protein_coding MGP_CBAJ_T0073619.1 MGP_CBAJ_G0029698.1 mouse_genomes_project 5 135015485 135059866 - Acad10 protein_coding retained_intron MGP_CBAJ_T0073620.1 MGP_CBAJ_G0029698.1 mouse_genomes_project 5 135072828 135079148 - Acad10 protein_coding processed_transcript MGP_CBAJ_T0073881.1 MGP_CBAJ_G0029735.1 mouse_genomes_project 5 137348466 137378042 + MGP_CBAJ_P0073881 Lrrc43 protein_coding protein_coding MGP_CBAJ_T0073882.1 MGP_CBAJ_G0029735.1 mouse_genomes_project 5 137348486 137378055 + MGP_CBAJ_P0073882 Lrrc43 protein_coding protein_coding MGP_CBAJ_T0073883.1 MGP_CBAJ_G0029735.1 mouse_genomes_project 5 137348488 137378048 + MGP_CBAJ_P0073883 Lrrc43 protein_coding protein_coding MGP_CBAJ_T0014886.1 MGP_CBAJ_G0012998.1 mouse_genomes_project 5 118245910 118246196 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099365.1 MGP_CBAJ_G0037620.1 mouse_genomes_project 5 87465896 87465999 + Gm22974 snRNA snRNA MGP_CBAJ_T0069948.1 MGP_CBAJ_G0028993.1 mouse_genomes_project 5 22877362 22960010 + MGP_CBAJ_P0069948 Kmt2e protein_coding protein_coding MGP_CBAJ_T0069949.1 MGP_CBAJ_G0028993.1 mouse_genomes_project 5 22877362 22936074 + MGP_CBAJ_P0069949 Kmt2e protein_coding nonsense_mediated_decay MGP_CBAJ_T0069950.1 MGP_CBAJ_G0028993.1 mouse_genomes_project 5 22877370 22960010 + MGP_CBAJ_P0069950 Kmt2e protein_coding protein_coding MGP_CBAJ_T0069951.1 MGP_CBAJ_G0028993.1 mouse_genomes_project 5 22928228 22935125 + Kmt2e protein_coding processed_transcript MGP_CBAJ_T0069952.1 MGP_CBAJ_G0028993.1 mouse_genomes_project 5 22935174 22948617 + MGP_CBAJ_P0069952 Kmt2e protein_coding nonsense_mediated_decay MGP_CBAJ_T0069953.1 MGP_CBAJ_G0028993.1 mouse_genomes_project 5 22935222 22958637 + MGP_CBAJ_P0069953 Kmt2e protein_coding protein_coding MGP_CBAJ_T0069954.1 MGP_CBAJ_G0028993.1 mouse_genomes_project 5 22944829 22952896 + MGP_CBAJ_P0069954 Kmt2e protein_coding nonsense_mediated_decay MGP_CBAJ_T0069955.1 MGP_CBAJ_G0028993.1 mouse_genomes_project 5 22945366 22948767 + Kmt2e protein_coding retained_intron MGP_CBAJ_T0069956.1 MGP_CBAJ_G0028993.1 mouse_genomes_project 5 22950677 22952939 + MGP_CBAJ_P0069956 Kmt2e protein_coding nonsense_mediated_decay MGP_CBAJ_T0001457.1 MGP_CBAJ_G0001379.1 mouse_genomes_project 5 32460508 32461203 + TEC TEC MGP_CBAJ_T0004669.1 MGP_CBAJ_G0004032.1 mouse_genomes_project 5 110308493 110314861 - 4930458D05Rik antisense antisense MGP_CBAJ_T0004770.1 MGP_CBAJ_G0004102.1 mouse_genomes_project 5 149978552 149982208 + Gm10369 antisense antisense MGP_CBAJ_T0001513.1 MGP_CBAJ_G0001434.1 mouse_genomes_project 5 48625383 48626584 + TEC TEC MGP_CBAJ_T0014875.1 MGP_CBAJ_G0012987.1 mouse_genomes_project 5 115025076 115025358 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0070445.1 MGP_CBAJ_G0029084.1 mouse_genomes_project 5 31568181 31586417 - MGP_CBAJ_P0070445 Ppm1g protein_coding protein_coding MGP_CBAJ_T0070446.1 MGP_CBAJ_G0029084.1 mouse_genomes_project 5 31568185 31586539 - MGP_CBAJ_P0070446 Ppm1g protein_coding protein_coding MGP_CBAJ_T0070447.1 MGP_CBAJ_G0029084.1 mouse_genomes_project 5 31568619 31570601 - Ppm1g protein_coding retained_intron MGP_CBAJ_T0070449.1 MGP_CBAJ_G0029084.1 mouse_genomes_project 5 31570609 31573183 - MGP_CBAJ_P0070449 Ppm1g protein_coding protein_coding MGP_CBAJ_T0070450.1 MGP_CBAJ_G0029084.1 mouse_genomes_project 5 31584631 31586417 - Ppm1g protein_coding retained_intron MGP_CBAJ_T0074569.1 MGP_CBAJ_G0029853.1 mouse_genomes_project 5 151220575 151254373 - MGP_CBAJ_P0074569 Styxl1 protein_coding protein_coding MGP_CBAJ_T0074570.1 MGP_CBAJ_G0029853.1 mouse_genomes_project 5 151220605 151246455 - MGP_CBAJ_P0074570 Styxl1 protein_coding protein_coding MGP_CBAJ_T0074571.1 MGP_CBAJ_G0029853.1 mouse_genomes_project 5 151231741 151254451 - MGP_CBAJ_P0074571 Styxl1 protein_coding protein_coding MGP_CBAJ_T0075524.1 MGP_CBAJ_G0030061.1 mouse_genomes_project 5 165156704 165163170 - MGP_CBAJ_P0075524 Cdx2 protein_coding protein_coding MGP_CBAJ_T0014825.1 MGP_CBAJ_G0012937.1 mouse_genomes_project 5 90194953 90195821 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017925.1 MGP_CBAJ_G0015353.1 mouse_genomes_project 5 137195938 137197356 + 5830487J09Rik processed_transcript sense_intronic MGP_CBAJ_T0017926.1 MGP_CBAJ_G0015353.1 mouse_genomes_project 5 137196393 137198314 + 5830487J09Rik processed_transcript TEC MGP_CBAJ_T0073310.1 MGP_CBAJ_G0029635.1 mouse_genomes_project 5 127684022 127737024 + MGP_CBAJ_P0073310 Pxn protein_coding protein_coding MGP_CBAJ_T0073311.1 MGP_CBAJ_G0029635.1 mouse_genomes_project 5 127684057 127737019 + Pxn protein_coding retained_intron MGP_CBAJ_T0073312.1 MGP_CBAJ_G0029635.1 mouse_genomes_project 5 127684154 127736015 + MGP_CBAJ_P0073312 Pxn protein_coding protein_coding MGP_CBAJ_T0073313.1 MGP_CBAJ_G0029635.1 mouse_genomes_project 5 127684202 127731924 + MGP_CBAJ_P0073313 Pxn protein_coding protein_coding MGP_CBAJ_T0073314.1 MGP_CBAJ_G0029635.1 mouse_genomes_project 5 127693705 127725920 + Pxn protein_coding processed_transcript MGP_CBAJ_T0073315.1 MGP_CBAJ_G0029635.1 mouse_genomes_project 5 127700853 127737019 + Pxn protein_coding processed_transcript MGP_CBAJ_T0073316.1 MGP_CBAJ_G0029635.1 mouse_genomes_project 5 127724983 127726449 + Pxn protein_coding processed_transcript MGP_CBAJ_T0073317.1 MGP_CBAJ_G0029635.1 mouse_genomes_project 5 127725121 127735538 + MGP_CBAJ_P0073317 Pxn protein_coding protein_coding MGP_CBAJ_T0073318.1 MGP_CBAJ_G0029635.1 mouse_genomes_project 5 127725150 127725985 + Pxn protein_coding retained_intron MGP_CBAJ_T0073319.1 MGP_CBAJ_G0029635.1 mouse_genomes_project 5 127725832 127730793 + Pxn protein_coding retained_intron MGP_CBAJ_T0073320.1 MGP_CBAJ_G0029635.1 mouse_genomes_project 5 127726340 127726812 + Pxn protein_coding retained_intron MGP_CBAJ_T0073321.1 MGP_CBAJ_G0029635.1 mouse_genomes_project 5 127732975 127733829 + Pxn protein_coding retained_intron MGP_CBAJ_T0004739.1 MGP_CBAJ_G0004081.1 mouse_genomes_project 5 136702473 136711466 + A930024E05Rik antisense antisense MGP_CBAJ_T0074464.1 MGP_CBAJ_G0029833.1 mouse_genomes_project 5 150372375 150373022 + MGP_CBAJ_P0074464 Abhd11 protein_coding protein_coding MGP_CBAJ_T0074465.1 MGP_CBAJ_G0029833.1 mouse_genomes_project 5 150372418 150375133 + MGP_CBAJ_P0074465 Abhd11 protein_coding protein_coding MGP_CBAJ_T0074466.1 MGP_CBAJ_G0029833.1 mouse_genomes_project 5 150372653 150375133 + MGP_CBAJ_P0074466 Abhd11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074467.1 MGP_CBAJ_G0029833.1 mouse_genomes_project 5 150372668 150375133 + MGP_CBAJ_P0074467 Abhd11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0074468.1 MGP_CBAJ_G0029833.1 mouse_genomes_project 5 150372674 150375139 + MGP_CBAJ_P0074468 Abhd11 protein_coding protein_coding MGP_CBAJ_T0074469.1 MGP_CBAJ_G0029833.1 mouse_genomes_project 5 150372935 150374939 + MGP_CBAJ_P0074469 Abhd11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0100608.1 MGP_CBAJ_G0038863.1 mouse_genomes_project 5 60613529 60613657 - Gm23015 snoRNA snoRNA MGP_CBAJ_T0073054.1 MGP_CBAJ_G0029585.1 mouse_genomes_project 5 125498354 125532064 - MGP_CBAJ_P0073054 Sart3 protein_coding protein_coding MGP_CBAJ_T0073055.1 MGP_CBAJ_G0029585.1 mouse_genomes_project 5 125498356 125528511 - MGP_CBAJ_P0073055 Sart3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0073056.1 MGP_CBAJ_G0029585.1 mouse_genomes_project 5 125500586 125501504 - Sart3 protein_coding retained_intron MGP_CBAJ_T0073057.1 MGP_CBAJ_G0029585.1 mouse_genomes_project 5 125501678 125511355 - Sart3 protein_coding processed_transcript MGP_CBAJ_T0073058.1 MGP_CBAJ_G0029585.1 mouse_genomes_project 5 125510146 125510670 - Sart3 protein_coding processed_transcript MGP_CBAJ_T0073059.1 MGP_CBAJ_G0029585.1 mouse_genomes_project 5 125510892 125514127 - Sart3 protein_coding retained_intron MGP_CBAJ_T0073060.1 MGP_CBAJ_G0029585.1 mouse_genomes_project 5 125511319 125517174 - Sart3 protein_coding processed_transcript MGP_CBAJ_T0008020.1 MGP_CBAJ_G0006529.1 mouse_genomes_project 5 46957810 46973259 + 4930431F12Rik lincRNA lincRNA MGP_CBAJ_T0007938.1 MGP_CBAJ_G0006475.1 mouse_genomes_project 5 5254112 5530143 - lincRNA lincRNA MGP_CBAJ_T0014701.1 MGP_CBAJ_G0012813.1 mouse_genomes_project 5 27784127 27785109 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0073546.1 MGP_CBAJ_G0029682.1 mouse_genomes_project 5 134020546 134096084 - MGP_CBAJ_P0073546 Oas1a protein_coding protein_coding MGP_CBAJ_T0071636.1 MGP_CBAJ_G0029278.1 mouse_genomes_project 5 76913231 77399934 + MGP_CBAJ_P0071636 Gabrb1 protein_coding protein_coding MGP_CBAJ_T0071637.1 MGP_CBAJ_G0029278.1 mouse_genomes_project 5 76963934 77434858 + MGP_CBAJ_P0071637 Gabrb1 protein_coding protein_coding MGP_CBAJ_T0001554.1 MGP_CBAJ_G0001474.1 mouse_genomes_project 5 54616713 54620582 - TEC TEC MGP_CBAJ_T0100638.1 MGP_CBAJ_G0038893.1 mouse_genomes_project 5 134495357 134495491 + Gm26205 snoRNA snoRNA MGP_CBAJ_T0070859.1 MGP_CBAJ_G0029145.1 mouse_genomes_project 5 36399815 36414177 + MGP_CBAJ_P0070859 Hmx1 protein_coding protein_coding MGP_CBAJ_T0070860.1 MGP_CBAJ_G0029145.1 mouse_genomes_project 5 36399824 36403598 + MGP_CBAJ_P0070860 Hmx1 protein_coding protein_coding MGP_CBAJ_T0004548.1 MGP_CBAJ_G0003938.1 mouse_genomes_project 5 5608942 5624257 - Gm15731 antisense antisense MGP_CBAJ_T0069579.1 MGP_CBAJ_G0028926.1 mouse_genomes_project 5 668473 792146 - MGP_CBAJ_P0069579 Ankib1 protein_coding protein_coding MGP_CBAJ_T0069580.1 MGP_CBAJ_G0028926.1 mouse_genomes_project 5 671942 680539 - Ankib1 protein_coding retained_intron MGP_CBAJ_T0069581.1 MGP_CBAJ_G0028926.1 mouse_genomes_project 5 672353 783947 - MGP_CBAJ_P0069581 Ankib1 protein_coding protein_coding MGP_CBAJ_T0069582.1 MGP_CBAJ_G0028926.1 mouse_genomes_project 5 673274 673703 - Ankib1 protein_coding retained_intron MGP_CBAJ_T0069583.1 MGP_CBAJ_G0028926.1 mouse_genomes_project 5 679024 680276 - Ankib1 protein_coding retained_intron MGP_CBAJ_T0069584.1 MGP_CBAJ_G0028926.1 mouse_genomes_project 5 718495 792008 - Ankib1 protein_coding retained_intron MGP_CBAJ_T0010559.1 MGP_CBAJ_G0008697.1 mouse_genomes_project 5 69036139 69036256 - Gm25306 miRNA miRNA MGP_CBAJ_T0004650.1 MGP_CBAJ_G0004021.1 mouse_genomes_project 5 99106365 99123487 - Gm42532 antisense antisense MGP_CBAJ_T0100641.1 MGP_CBAJ_G0038896.1 mouse_genomes_project 5 162049278 162049407 + Gm23995 snoRNA snoRNA MGP_CBAJ_T0098396.1 MGP_CBAJ_G0036662.1 mouse_genomes_project 5 1998273 2001380 - Gm43112 sense_intronic sense_intronic MGP_CBAJ_T0072598.1 MGP_CBAJ_G0029494.1 mouse_genomes_project 5 116025874 116064395 + MGP_CBAJ_P0072598 Zfp326 protein_coding protein_coding MGP_CBAJ_T0072599.1 MGP_CBAJ_G0029494.1 mouse_genomes_project 5 116025877 116065433 + Zfp326 protein_coding retained_intron MGP_CBAJ_T0072600.1 MGP_CBAJ_G0029494.1 mouse_genomes_project 5 116025877 116037505 + Zfp326 protein_coding retained_intron MGP_CBAJ_T0072601.1 MGP_CBAJ_G0029494.1 mouse_genomes_project 5 116025877 116065433 + MGP_CBAJ_P0072601 Zfp326 protein_coding protein_coding MGP_CBAJ_T0072602.1 MGP_CBAJ_G0029494.1 mouse_genomes_project 5 116025885 116064792 + MGP_CBAJ_P0072602 Zfp326 protein_coding nonsense_mediated_decay MGP_CBAJ_T0072603.1 MGP_CBAJ_G0029494.1 mouse_genomes_project 5 116025992 116065440 + MGP_CBAJ_P0072603 Zfp326 protein_coding unknown_likely_coding MGP_CBAJ_T0072604.1 MGP_CBAJ_G0029494.1 mouse_genomes_project 5 116026338 116035668 + Zfp326 protein_coding processed_transcript MGP_CBAJ_T0072605.1 MGP_CBAJ_G0029494.1 mouse_genomes_project 5 116028167 116057181 + Zfp326 protein_coding retained_intron MGP_CBAJ_T0072606.1 MGP_CBAJ_G0029494.1 mouse_genomes_project 5 116040425 116046077 + Zfp326 protein_coding retained_intron MGP_CBAJ_T0072607.1 MGP_CBAJ_G0029494.1 mouse_genomes_project 5 116054519 116057594 + Zfp326 protein_coding retained_intron MGP_CBAJ_T0001643.1 MGP_CBAJ_G0001562.1 mouse_genomes_project 5 77915155 77926349 - TEC TEC MGP_CBAJ_T0008161.1 MGP_CBAJ_G0006641.1 mouse_genomes_project 5 118884418 118886329 + Gm10419 lincRNA lincRNA MGP_CBAJ_T0008162.1 MGP_CBAJ_G0006641.1 mouse_genomes_project 5 118884440 118889455 + Gm10419 lincRNA lincRNA MGP_CBAJ_T0008163.1 MGP_CBAJ_G0006641.1 mouse_genomes_project 5 118884885 118892520 + Gm10419 lincRNA lincRNA MGP_CBAJ_T0008164.1 MGP_CBAJ_G0006641.1 mouse_genomes_project 5 118886507 118894889 + Gm10419 lincRNA lincRNA MGP_CBAJ_T0008165.1 MGP_CBAJ_G0006641.1 mouse_genomes_project 5 118887509 118889456 + Gm10419 lincRNA lincRNA MGP_CBAJ_T0001610.1 MGP_CBAJ_G0001529.1 mouse_genomes_project 5 70701374 70704768 - TEC TEC MGP_CBAJ_T0014834.1 MGP_CBAJ_G0012946.1 mouse_genomes_project 5 95086336 95088251 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001757.1 MGP_CBAJ_G0001675.1 mouse_genomes_project 5 132456328 132458684 - TEC TEC MGP_CBAJ_T0001482.1 MGP_CBAJ_G0001403.1 mouse_genomes_project 5 42909694 42911359 + TEC TEC MGP_CBAJ_T0098211.1 MGP_CBAJ_G0036484.1 mouse_genomes_project 5 137388084 137388221 + Gm24682 scaRNA scaRNA MGP_CBAJ_T0008027.1 MGP_CBAJ_G0006535.1 mouse_genomes_project 5 54841546 54842758 + Gm43177 lincRNA lincRNA MGP_CBAJ_T0008383.1 MGP_CBAJ_G0006787.1 mouse_genomes_project 5 170253897 170266870 + lincRNA lincRNA MGP_CBAJ_T0072210.1 MGP_CBAJ_G0029411.1 mouse_genomes_project 5 100248867 100280837 - MGP_CBAJ_P0072210 G3bp2 protein_coding protein_coding MGP_CBAJ_T0072211.1 MGP_CBAJ_G0029411.1 mouse_genomes_project 5 100248885 100280999 - MGP_CBAJ_P0072211 G3bp2 protein_coding protein_coding MGP_CBAJ_T0072212.1 MGP_CBAJ_G0029411.1 mouse_genomes_project 5 100250438 100280518 - MGP_CBAJ_P0072212 G3bp2 protein_coding protein_coding MGP_CBAJ_T0072213.1 MGP_CBAJ_G0029411.1 mouse_genomes_project 5 100250438 100280793 - MGP_CBAJ_P0072213 G3bp2 protein_coding protein_coding MGP_CBAJ_T0072214.1 MGP_CBAJ_G0029411.1 mouse_genomes_project 5 100251221 100280938 - MGP_CBAJ_P0072214 G3bp2 protein_coding protein_coding MGP_CBAJ_T0072215.1 MGP_CBAJ_G0029411.1 mouse_genomes_project 5 100253082 100264234 - G3bp2 protein_coding processed_transcript MGP_CBAJ_T0072216.1 MGP_CBAJ_G0029411.1 mouse_genomes_project 5 100254540 100264225 - G3bp2 protein_coding retained_intron MGP_CBAJ_T0072217.1 MGP_CBAJ_G0029411.1 mouse_genomes_project 5 100263231 100270184 - MGP_CBAJ_P0072217 G3bp2 protein_coding protein_coding MGP_CBAJ_T0072218.1 MGP_CBAJ_G0029411.1 mouse_genomes_project 5 100265056 100280543 - MGP_CBAJ_P0072218 G3bp2 protein_coding protein_coding MGP_CBAJ_T0072219.1 MGP_CBAJ_G0029411.1 mouse_genomes_project 5 100266574 100280997 - G3bp2 protein_coding retained_intron MGP_CBAJ_T0014921.1 MGP_CBAJ_G0013033.1 mouse_genomes_project 5 129837970 129838407 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0075136.1 MGP_CBAJ_G0029967.1 mouse_genomes_project 5 157182955 157213331 + MGP_CBAJ_P0075136 Chst12 protein_coding protein_coding MGP_CBAJ_T0075137.1 MGP_CBAJ_G0029967.1 mouse_genomes_project 5 157182980 157211761 + MGP_CBAJ_P0075137 Chst12 protein_coding protein_coding MGP_CBAJ_T0001575.1 MGP_CBAJ_G0001495.1 mouse_genomes_project 5 61559410 61560605 + TEC TEC MGP_CBAJ_T0004734.1 MGP_CBAJ_G0004076.1 mouse_genomes_project 5 135160971 135171510 - Gm16552 antisense antisense MGP_CBAJ_T0004562.1 MGP_CBAJ_G0003950.1 mouse_genomes_project 5 23954156 23976119 - Gm15587 antisense antisense MGP_CBAJ_T0004563.1 MGP_CBAJ_G0003950.1 mouse_genomes_project 5 23957151 23976151 - Gm15587 antisense antisense MGP_CBAJ_T0014851.1 MGP_CBAJ_G0012963.1 mouse_genomes_project 5 99926066 99926938 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0007995.1 MGP_CBAJ_G0006511.1 mouse_genomes_project 5 38378761 38390125 + lincRNA lincRNA MGP_CBAJ_T0007996.1 MGP_CBAJ_G0006511.1 mouse_genomes_project 5 38381725 38388822 + lincRNA lincRNA MGP_CBAJ_T0014887.1 MGP_CBAJ_G0012999.1 mouse_genomes_project 5 118422390 118422617 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0074133.1 MGP_CBAJ_G0029774.1 mouse_genomes_project 5 139499043 139500278 + MGP_CBAJ_P0074133 Gm10382 protein_coding protein_coding MGP_CBAJ_T0001416.1 MGP_CBAJ_G0001340.1 mouse_genomes_project 5 11862601 11864458 - TEC TEC MGP_CBAJ_T0010612.1 MGP_CBAJ_G0008750.1 mouse_genomes_project 5 157079715 157079786 + Mir7038 miRNA miRNA MGP_CBAJ_T0004814.1 MGP_CBAJ_G0004133.1 mouse_genomes_project 5 168483524 168498943 - Gm42557 antisense antisense MGP_CBAJ_T0014807.1 MGP_CBAJ_G0012919.1 mouse_genomes_project 5 80594671 80595572 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001783.1 MGP_CBAJ_G0001701.1 mouse_genomes_project 5 137564945 137565477 + TEC TEC MGP_CBAJ_T0001786.1 MGP_CBAJ_G0001704.1 mouse_genomes_project 5 138292723 138294050 - TEC TEC MGP_CBAJ_T0074149.1 MGP_CBAJ_G0029779.1 mouse_genomes_project 5 141560437 141931510 + MGP_CBAJ_P0074149 Tmem132c protein_coding protein_coding MGP_CBAJ_T0074150.1 MGP_CBAJ_G0029779.1 mouse_genomes_project 5 141560455 141601876 + Tmem132c protein_coding processed_transcript MGP_CBAJ_T0074151.1 MGP_CBAJ_G0029779.1 mouse_genomes_project 5 141917230 141930584 + Tmem132c protein_coding processed_transcript MGP_CBAJ_T0074152.1 MGP_CBAJ_G0029779.1 mouse_genomes_project 5 141918981 141930204 + MGP_CBAJ_P0074152 Tmem132c protein_coding protein_coding MGP_CBAJ_T0010540.1 MGP_CBAJ_G0008678.1 mouse_genomes_project 5 7085607 7085683 + Mir879 miRNA miRNA MGP_CBAJ_T0070915.1 MGP_CBAJ_G0029154.1 mouse_genomes_project 5 37295636 37298183 + MGP_CBAJ_P0070915 Psapl1 protein_coding protein_coding MGP_CBAJ_T0008169.1 MGP_CBAJ_G0006645.1 mouse_genomes_project 5 121840642 121856531 + A630023P12Rik lincRNA lincRNA MGP_CBAJ_T0008170.1 MGP_CBAJ_G0006645.1 mouse_genomes_project 5 121840663 121841242 + A630023P12Rik lincRNA lincRNA MGP_CBAJ_T0008171.1 MGP_CBAJ_G0006645.1 mouse_genomes_project 5 121849211 121855685 + A630023P12Rik lincRNA lincRNA MGP_CBAJ_T0008172.1 MGP_CBAJ_G0006645.1 mouse_genomes_project 5 121849247 121853023 + A630023P12Rik lincRNA lincRNA MGP_CBAJ_T0008173.1 MGP_CBAJ_G0006645.1 mouse_genomes_project 5 121849278 121856539 + A630023P12Rik lincRNA lincRNA MGP_CBAJ_T0008218.1 MGP_CBAJ_G0006671.1 mouse_genomes_project 5 128593974 128596189 + Gm13839 lincRNA lincRNA MGP_CBAJ_T0071160.1 MGP_CBAJ_G0029200.1 mouse_genomes_project 5 47485949 47505964 - MGP_CBAJ_P0071160 Qdpr protein_coding protein_coding MGP_CBAJ_T0071161.1 MGP_CBAJ_G0029200.1 mouse_genomes_project 5 47485956 47505909 - MGP_CBAJ_P0071161 Qdpr protein_coding protein_coding MGP_CBAJ_T0071162.1 MGP_CBAJ_G0029200.1 mouse_genomes_project 5 47485981 47506020 - MGP_CBAJ_P0071162 Qdpr protein_coding protein_coding MGP_CBAJ_T0071163.1 MGP_CBAJ_G0029200.1 mouse_genomes_project 5 47485981 47505959 - MGP_CBAJ_P0071163 Qdpr protein_coding protein_coding MGP_CBAJ_T0071164.1 MGP_CBAJ_G0029200.1 mouse_genomes_project 5 47485981 47503961 - MGP_CBAJ_P0071164 Qdpr protein_coding protein_coding MGP_CBAJ_T0071165.1 MGP_CBAJ_G0029200.1 mouse_genomes_project 5 47485981 47505753 - MGP_CBAJ_P0071165 Qdpr protein_coding protein_coding MGP_CBAJ_T0071166.1 MGP_CBAJ_G0029200.1 mouse_genomes_project 5 47486073 47495989 - Qdpr protein_coding retained_intron MGP_CBAJ_T0071167.1 MGP_CBAJ_G0029200.1 mouse_genomes_project 5 47486425 47499905 - Qdpr protein_coding processed_transcript MGP_CBAJ_T0071168.1 MGP_CBAJ_G0029200.1 mouse_genomes_project 5 47491267 47505942 - MGP_CBAJ_P0071168 Qdpr protein_coding protein_coding MGP_CBAJ_T0071169.1 MGP_CBAJ_G0029200.1 mouse_genomes_project 5 47495434 47505926 - MGP_CBAJ_P0071169 Qdpr protein_coding protein_coding MGP_CBAJ_T0074729.1 MGP_CBAJ_G0029882.1 mouse_genomes_project 5 152908216 152922592 - MGP_CBAJ_P0074729 Muc3 protein_coding protein_coding MGP_CBAJ_T0074730.1 MGP_CBAJ_G0029882.1 mouse_genomes_project 5 152908255 152912424 - Muc3 protein_coding processed_transcript MGP_CBAJ_T0074452.1 MGP_CBAJ_G0029828.1 mouse_genomes_project 5 150251162 150258025 - MGP_CBAJ_P0074452 Wbscr28 protein_coding protein_coding MGP_CBAJ_T0074453.1 MGP_CBAJ_G0029828.1 mouse_genomes_project 5 150251163 150258025 - MGP_CBAJ_P0074453 Wbscr28 protein_coding protein_coding MGP_CBAJ_T0017916.1 MGP_CBAJ_G0015351.1 mouse_genomes_project 5 121442344 121450388 - Gm15787 processed_transcript antisense MGP_CBAJ_T0017917.1 MGP_CBAJ_G0015351.1 mouse_genomes_project 5 121442956 121464692 - Gm15787 processed_transcript processed_transcript MGP_CBAJ_T0017918.1 MGP_CBAJ_G0015351.1 mouse_genomes_project 5 121450398 121464631 - Gm15787 processed_transcript antisense MGP_CBAJ_T0017919.1 MGP_CBAJ_G0015351.1 mouse_genomes_project 5 121455822 121464692 - Gm15787 processed_transcript antisense MGP_CBAJ_T0017920.1 MGP_CBAJ_G0015351.1 mouse_genomes_project 5 121456509 121464654 - Gm15787 processed_transcript antisense MGP_CBAJ_T0017921.1 MGP_CBAJ_G0015351.1 mouse_genomes_project 5 121456571 121458211 - Gm15787 processed_transcript antisense MGP_CBAJ_T0017922.1 MGP_CBAJ_G0015351.1 mouse_genomes_project 5 121457912 121464692 - Gm15787 processed_transcript antisense MGP_CBAJ_T0017923.1 MGP_CBAJ_G0015351.1 mouse_genomes_project 5 121458435 121464628 - Gm15787 processed_transcript antisense MGP_CBAJ_T0075251.1 MGP_CBAJ_G0029991.1 mouse_genomes_project 5 160289871 160313202 - MGP_CBAJ_P0075251 Spdye4a protein_coding protein_coding MGP_CBAJ_T0075252.1 MGP_CBAJ_G0029991.1 mouse_genomes_project 5 160294252 160314184 - MGP_CBAJ_P0075252 Spdye4a protein_coding protein_coding MGP_CBAJ_T0075253.1 MGP_CBAJ_G0029991.1 mouse_genomes_project 5 160294360 160314210 - MGP_CBAJ_P0075253 Spdye4a protein_coding protein_coding MGP_CBAJ_T0014784.1 MGP_CBAJ_G0012896.1 mouse_genomes_project 5 68535896 68536848 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001813.1 MGP_CBAJ_G0001730.1 mouse_genomes_project 5 146568199 146569496 - TEC TEC MGP_CBAJ_T0008216.1 MGP_CBAJ_G0006670.1 mouse_genomes_project 5 128266986 128271000 - Gm13842 lincRNA lincRNA MGP_CBAJ_T0008217.1 MGP_CBAJ_G0006670.1 mouse_genomes_project 5 128267421 128271394 - Gm13842 lincRNA lincRNA MGP_CBAJ_T0075114.1 MGP_CBAJ_G0029962.1 mouse_genomes_project 5 156621526 156956718 - MGP_CBAJ_P0075114 Mad1l1 protein_coding protein_coding MGP_CBAJ_T0075115.1 MGP_CBAJ_G0029962.1 mouse_genomes_project 5 156621526 156956716 - MGP_CBAJ_P0075115 Mad1l1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075116.1 MGP_CBAJ_G0029962.1 mouse_genomes_project 5 156621531 156798339 - Mad1l1 protein_coding processed_transcript MGP_CBAJ_T0075117.1 MGP_CBAJ_G0029962.1 mouse_genomes_project 5 156707105 156733901 - Mad1l1 protein_coding processed_transcript MGP_CBAJ_T0075118.1 MGP_CBAJ_G0029962.1 mouse_genomes_project 5 156764706 156798080 - Mad1l1 protein_coding processed_transcript MGP_CBAJ_T0075119.1 MGP_CBAJ_G0029962.1 mouse_genomes_project 5 156787799 156897397 - Mad1l1 protein_coding processed_transcript MGP_CBAJ_T0099372.1 MGP_CBAJ_G0037627.1 mouse_genomes_project 5 99273014 99273121 - Gm23092 snRNA snRNA MGP_CBAJ_T0001766.1 MGP_CBAJ_G0001684.1 mouse_genomes_project 5 135158424 135161512 + TEC TEC MGP_CBAJ_T0098050.1 MGP_CBAJ_G0036323.1 mouse_genomes_project 5 529133 529253 + n-R5s169 rRNA rRNA MGP_CBAJ_T0072005.1 MGP_CBAJ_G0029346.1 mouse_genomes_project 5 94412902 94432252 + MGP_CBAJ_P0072005 Ugt2b35 protein_coding protein_coding MGP_CBAJ_T0001458.1 MGP_CBAJ_G0001380.1 mouse_genomes_project 5 32664144 32667029 - TEC TEC MGP_CBAJ_T0001459.1 MGP_CBAJ_G0001380.1 mouse_genomes_project 5 32664144 32667026 - TEC TEC MGP_CBAJ_T0071801.1 MGP_CBAJ_G0029307.1 mouse_genomes_project 5 81336516 81420663 + MGP_CBAJ_P0071801 Kit protein_coding protein_coding MGP_CBAJ_T0071802.1 MGP_CBAJ_G0029307.1 mouse_genomes_project 5 81336555 81420663 + MGP_CBAJ_P0071802 Kit protein_coding protein_coding MGP_CBAJ_T0071803.1 MGP_CBAJ_G0029307.1 mouse_genomes_project 5 81374041 81384417 + Kit protein_coding retained_intron MGP_CBAJ_T0071804.1 MGP_CBAJ_G0029307.1 mouse_genomes_project 5 81400548 81402458 + Kit protein_coding retained_intron MGP_CBAJ_T0071805.1 MGP_CBAJ_G0029307.1 mouse_genomes_project 5 81404498 81409942 + Kit protein_coding retained_intron MGP_CBAJ_T0071806.1 MGP_CBAJ_G0029307.1 mouse_genomes_project 5 81409654 81416797 + Kit protein_coding retained_intron MGP_CBAJ_T0071807.1 MGP_CBAJ_G0029307.1 mouse_genomes_project 5 81413040 81420635 + Kit protein_coding retained_intron MGP_CBAJ_T0071808.1 MGP_CBAJ_G0029307.1 mouse_genomes_project 5 81413139 81416242 + Kit protein_coding retained_intron MGP_CBAJ_T0072358.1 MGP_CBAJ_G0029438.1 mouse_genomes_project 5 106387102 106397236 - MGP_CBAJ_P0072358 Naa11 protein_coding protein_coding MGP_CBAJ_T0099400.1 MGP_CBAJ_G0037655.1 mouse_genomes_project 5 145604191 145604295 + Gm23761 snRNA snRNA MGP_CBAJ_T0004620.1 MGP_CBAJ_G0003996.1 mouse_genomes_project 5 71334998 71394914 - Uchl1os antisense antisense MGP_CBAJ_T0004621.1 MGP_CBAJ_G0003996.1 mouse_genomes_project 5 71366721 71394449 - Uchl1os antisense antisense MGP_CBAJ_T0004666.1 MGP_CBAJ_G0004030.1 mouse_genomes_project 5 109420673 109440965 + Tmem150cos antisense antisense MGP_CBAJ_T0004667.1 MGP_CBAJ_G0004030.1 mouse_genomes_project 5 109437715 109441089 + Tmem150cos antisense antisense MGP_CBAJ_T0001589.1 MGP_CBAJ_G0001508.1 mouse_genomes_project 5 69225655 69227377 + TEC TEC MGP_CBAJ_T0001815.1 MGP_CBAJ_G0001732.1 mouse_genomes_project 5 146606783 146609643 - TEC TEC MGP_CBAJ_T0008097.1 MGP_CBAJ_G0006592.1 mouse_genomes_project 5 99896827 99897900 - 1700063O14Rik lincRNA lincRNA MGP_CBAJ_T0014652.1 MGP_CBAJ_G0012764.1 mouse_genomes_project 5 14320821 14321230 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014868.1 MGP_CBAJ_G0012980.1 mouse_genomes_project 5 111787954 111788723 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011471.1 MGP_CBAJ_G0009609.1 mouse_genomes_project 5 109820200 109820274 + Gm27553 misc_RNA misc_RNA MGP_CBAJ_T0101148.1 MGP_CBAJ_G0039336.1 mouse_genomes_project 5 131154783 131180213 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101149.1 MGP_CBAJ_G0039336.1 mouse_genomes_project 5 131179552 131180030 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0071468.1 MGP_CBAJ_G0029252.1 mouse_genomes_project 5 70347240 70429966 + MGP_CBAJ_P0071468 N4bp2 protein_coding protein_coding MGP_CBAJ_T0071469.1 MGP_CBAJ_G0029252.1 mouse_genomes_project 5 70350031 70374790 + N4bp2 protein_coding processed_transcript MGP_CBAJ_T0071470.1 MGP_CBAJ_G0029252.1 mouse_genomes_project 5 70350031 70364492 + N4bp2 protein_coding retained_intron MGP_CBAJ_T0071471.1 MGP_CBAJ_G0029252.1 mouse_genomes_project 5 70350172 70415460 + MGP_CBAJ_P0071471 N4bp2 protein_coding protein_coding MGP_CBAJ_T0071472.1 MGP_CBAJ_G0029252.1 mouse_genomes_project 5 70371478 70373632 + N4bp2 protein_coding retained_intron MGP_CBAJ_T0071473.1 MGP_CBAJ_G0029252.1 mouse_genomes_project 5 70374663 70426508 + MGP_CBAJ_P0071473 N4bp2 protein_coding protein_coding MGP_CBAJ_T0071474.1 MGP_CBAJ_G0029252.1 mouse_genomes_project 5 70399452 70402491 + N4bp2 protein_coding retained_intron MGP_CBAJ_T0071475.1 MGP_CBAJ_G0029252.1 mouse_genomes_project 5 70407979 70413302 + N4bp2 protein_coding retained_intron MGP_CBAJ_T0071476.1 MGP_CBAJ_G0029252.1 mouse_genomes_project 5 70425099 70426732 + N4bp2 protein_coding retained_intron MGP_CBAJ_T0010589.1 MGP_CBAJ_G0008727.1 mouse_genomes_project 5 136326310 136326429 + Mir8115 miRNA miRNA MGP_CBAJ_T0101949.1 MGP_CBAJ_G0039980.1 mouse_genomes_project 5 109580134 109753390 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0100617.1 MGP_CBAJ_G0038872.1 mouse_genomes_project 5 79707783 79707904 + Snora26 snoRNA snoRNA MGP_CBAJ_T0101956.1 MGP_CBAJ_G0039987.1 mouse_genomes_project 5 157119685 157146006 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0072690.1 MGP_CBAJ_G0029511.1 mouse_genomes_project 5 118134859 118280494 - MGP_CBAJ_P0072690 Evi5 protein_coding protein_coding MGP_CBAJ_T0072691.1 MGP_CBAJ_G0029511.1 mouse_genomes_project 5 118137340 118202089 - Evi5 protein_coding retained_intron MGP_CBAJ_T0072692.1 MGP_CBAJ_G0029511.1 mouse_genomes_project 5 118154592 118191855 - Evi5 protein_coding retained_intron MGP_CBAJ_T0072693.1 MGP_CBAJ_G0029511.1 mouse_genomes_project 5 118180572 118274568 - MGP_CBAJ_P0072693 Evi5 protein_coding protein_coding MGP_CBAJ_T0072694.1 MGP_CBAJ_G0029511.1 mouse_genomes_project 5 118205882 118274568 - MGP_CBAJ_P0072694 Evi5 protein_coding protein_coding MGP_CBAJ_T0072695.1 MGP_CBAJ_G0029511.1 mouse_genomes_project 5 118207467 118209116 - Evi5 protein_coding retained_intron MGP_CBAJ_T0072696.1 MGP_CBAJ_G0029511.1 mouse_genomes_project 5 118207917 118280431 - Evi5 protein_coding processed_transcript MGP_CBAJ_T0072697.1 MGP_CBAJ_G0029511.1 mouse_genomes_project 5 118207917 118280446 - MGP_CBAJ_P0072697 Evi5 protein_coding protein_coding MGP_CBAJ_T0072698.1 MGP_CBAJ_G0029511.1 mouse_genomes_project 5 118216794 118237724 - Evi5 protein_coding retained_intron MGP_CBAJ_T0072699.1 MGP_CBAJ_G0029511.1 mouse_genomes_project 5 118216830 118273788 - MGP_CBAJ_P0072699 Evi5 protein_coding protein_coding MGP_CBAJ_T0072700.1 MGP_CBAJ_G0029511.1 mouse_genomes_project 5 118220199 118274299 - Evi5 protein_coding processed_transcript MGP_CBAJ_T0072702.1 MGP_CBAJ_G0029511.1 mouse_genomes_project 5 118251591 118280443 - Evi5 protein_coding processed_transcript MGP_CBAJ_T0072703.1 MGP_CBAJ_G0029511.1 mouse_genomes_project 5 118278016 118280439 - Evi5 protein_coding processed_transcript MGP_CBAJ_T0014883.1 MGP_CBAJ_G0012995.1 mouse_genomes_project 5 117192977 117193220 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001397.1 MGP_CBAJ_G0001321.1 mouse_genomes_project 5 746320 749813 - TEC TEC MGP_CBAJ_T0017882.1 MGP_CBAJ_G0015338.1 mouse_genomes_project 5 52995352 53100579 - Gm36814 processed_transcript lincRNA MGP_CBAJ_T0017883.1 MGP_CBAJ_G0015338.1 mouse_genomes_project 5 53082021 53099623 - Gm36814 processed_transcript retained_intron MGP_CBAJ_T0072118.1 MGP_CBAJ_G0029385.1 mouse_genomes_project 5 97557172 97790222 - MGP_CBAJ_P0072118 Adamts3 protein_coding protein_coding MGP_CBAJ_T0072119.1 MGP_CBAJ_G0029385.1 mouse_genomes_project 5 97557172 97790222 - MGP_CBAJ_P0072119 Adamts3 protein_coding protein_coding MGP_CBAJ_T0072120.1 MGP_CBAJ_G0029385.1 mouse_genomes_project 5 97733806 97790621 - MGP_CBAJ_P0072120 Adamts3 protein_coding protein_coding MGP_CBAJ_T0072121.1 MGP_CBAJ_G0029385.1 mouse_genomes_project 5 97768755 97789434 - Adamts3 protein_coding processed_transcript MGP_CBAJ_T0004649.1 MGP_CBAJ_G0004020.1 mouse_genomes_project 5 98496667 98513433 - Gm43449 antisense antisense MGP_CBAJ_T0070254.1 MGP_CBAJ_G0029054.1 mouse_genomes_project 5 30564820 30617964 + MGP_CBAJ_P0070254 Drc1 protein_coding protein_coding MGP_CBAJ_T0070255.1 MGP_CBAJ_G0029054.1 mouse_genomes_project 5 30578492 30579459 + Drc1 protein_coding processed_transcript MGP_CBAJ_T0070256.1 MGP_CBAJ_G0029054.1 mouse_genomes_project 5 30585648 30603617 + Drc1 protein_coding processed_transcript MGP_CBAJ_T0070257.1 MGP_CBAJ_G0029054.1 mouse_genomes_project 5 30599526 30604207 + Drc1 protein_coding processed_transcript MGP_CBAJ_T0099350.1 MGP_CBAJ_G0037605.1 mouse_genomes_project 5 55084697 55084802 - Gm25601 snRNA snRNA MGP_CBAJ_T0071262.1 MGP_CBAJ_G0029215.1 mouse_genomes_project 5 55288946 55321837 - MGP_CBAJ_P0071262 Lgi2 protein_coding protein_coding MGP_CBAJ_T0071263.1 MGP_CBAJ_G0029215.1 mouse_genomes_project 5 55288946 55321997 - MGP_CBAJ_P0071263 Lgi2 protein_coding protein_coding MGP_CBAJ_T0001853.1 MGP_CBAJ_G0001769.1 mouse_genomes_project 5 156769957 156772265 - TEC TEC MGP_CBAJ_T0073508.1 MGP_CBAJ_G0029671.1 mouse_genomes_project 5 133624962 133645544 - MGP_CBAJ_P0073508 Rita1 protein_coding protein_coding MGP_CBAJ_T0073509.1 MGP_CBAJ_G0029671.1 mouse_genomes_project 5 133635056 133644842 - MGP_CBAJ_P0073509 Rita1 protein_coding protein_coding MGP_CBAJ_T0073510.1 MGP_CBAJ_G0029671.1 mouse_genomes_project 5 133635057 133639098 - Rita1 protein_coding processed_transcript MGP_CBAJ_T0073511.1 MGP_CBAJ_G0029671.1 mouse_genomes_project 5 133640424 133645794 - Rita1 protein_coding processed_transcript MGP_CBAJ_T0073512.1 MGP_CBAJ_G0029671.1 mouse_genomes_project 5 133642448 133645794 - MGP_CBAJ_P0073512 Rita1 protein_coding protein_coding MGP_CBAJ_T0073513.1 MGP_CBAJ_G0029671.1 mouse_genomes_project 5 133642448 133645794 - MGP_CBAJ_P0073513 Rita1 protein_coding protein_coding MGP_CBAJ_T0073514.1 MGP_CBAJ_G0029671.1 mouse_genomes_project 5 133643301 133645775 - MGP_CBAJ_P0073514 Rita1 protein_coding protein_coding MGP_CBAJ_T0073847.1 MGP_CBAJ_G0029729.1 mouse_genomes_project 5 136922089 137039104 + Psmd9 protein_coding processed_transcript MGP_CBAJ_T0073854.1 MGP_CBAJ_G0029729.1 mouse_genomes_project 5 137021273 137044782 + Psmd9 protein_coding processed_transcript MGP_CBAJ_T0073855.1 MGP_CBAJ_G0029729.1 mouse_genomes_project 5 137021273 137054424 + MGP_CBAJ_P0073855 Psmd9 protein_coding protein_coding MGP_CBAJ_T0073856.1 MGP_CBAJ_G0029729.1 mouse_genomes_project 5 137021341 137022110 + Psmd9 protein_coding retained_intron MGP_CBAJ_T0073857.1 MGP_CBAJ_G0029729.1 mouse_genomes_project 5 137021390 137053255 + MGP_CBAJ_P0073857 Psmd9 protein_coding unknown_likely_coding MGP_CBAJ_T0073858.1 MGP_CBAJ_G0029729.1 mouse_genomes_project 5 137022032 137023913 + Psmd9 protein_coding TEC MGP_CBAJ_T0073859.1 MGP_CBAJ_G0029729.1 mouse_genomes_project 5 137030712 137052815 + MGP_CBAJ_P0073859 Psmd9 protein_coding protein_coding MGP_CBAJ_T0073860.1 MGP_CBAJ_G0029729.1 mouse_genomes_project 5 137041350 137052815 + MGP_CBAJ_P0073860 Psmd9 protein_coding protein_coding MGP_CBAJ_T0008367.1 MGP_CBAJ_G0006775.1 mouse_genomes_project 5 167976567 167985891 + Gm43153 lincRNA lincRNA MGP_CBAJ_T0001446.1 MGP_CBAJ_G0001369.1 mouse_genomes_project 5 28599079 28600765 + TEC TEC MGP_CBAJ_T0008092.1 MGP_CBAJ_G0006587.1 mouse_genomes_project 5 96574987 96595767 + Gm42912 lincRNA lincRNA MGP_CBAJ_T0099393.1 MGP_CBAJ_G0037648.1 mouse_genomes_project 5 134672277 134672435 + Gm24671 snRNA snRNA MGP_CBAJ_T0008220.1 MGP_CBAJ_G0006673.1 mouse_genomes_project 5 128605032 128615730 + lincRNA lincRNA MGP_CBAJ_T0001580.1 MGP_CBAJ_G0001500.1 mouse_genomes_project 5 61793971 61796477 - TEC TEC MGP_CBAJ_T0014871.1 MGP_CBAJ_G0012983.1 mouse_genomes_project 5 113007259 113007847 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0014781.1 MGP_CBAJ_G0012893.1 mouse_genomes_project 5 66081941 66082557 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015139.1 MGP_CBAJ_G0013251.1 mouse_genomes_project 6 61434426 61434685 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000135.1 MGP_CBAJ_G0000103.1 mouse_genomes_project 6 72263793 72264507 + MGP_CBAJ_P0000135 Igkv1-132 IG_V_gene IG_V_gene MGP_CBAJ_T0015087.1 MGP_CBAJ_G0013199.1 mouse_genomes_project 6 42122932 42123313 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0076831.1 MGP_CBAJ_G0030328.1 mouse_genomes_project 6 43852562 43855284 - Tcaf3 protein_coding processed_transcript MGP_CBAJ_T0076832.1 MGP_CBAJ_G0030328.1 mouse_genomes_project 6 43854867 43864987 - MGP_CBAJ_P0076832 Tcaf3 protein_coding protein_coding MGP_CBAJ_T0076833.1 MGP_CBAJ_G0030328.1 mouse_genomes_project 6 43861764 43865307 - MGP_CBAJ_P0076833 Tcaf3 protein_coding protein_coding MGP_CBAJ_T0078516.1 MGP_CBAJ_G0030712.1 mouse_genomes_project 6 99032758 99044127 - MGP_CBAJ_P0078516 Chchd4 protein_coding protein_coding MGP_CBAJ_T0078517.1 MGP_CBAJ_G0030712.1 mouse_genomes_project 6 99042176 99044030 - Chchd4 protein_coding retained_intron MGP_CBAJ_T0079240.1 MGP_CBAJ_G0030849.1 mouse_genomes_project 6 129210175 129243910 - MGP_CBAJ_P0079240 Zfp248 protein_coding protein_coding MGP_CBAJ_T0079241.1 MGP_CBAJ_G0030849.1 mouse_genomes_project 6 129214519 129243815 - Zfp248 protein_coding processed_transcript MGP_CBAJ_T0079242.1 MGP_CBAJ_G0030849.1 mouse_genomes_project 6 129214597 129243461 - MGP_CBAJ_P0079242 Zfp248 protein_coding protein_coding MGP_CBAJ_T0079243.1 MGP_CBAJ_G0030849.1 mouse_genomes_project 6 129241494 129243898 - Zfp248 protein_coding retained_intron MGP_CBAJ_T0079244.1 MGP_CBAJ_G0030849.1 mouse_genomes_project 6 129241527 129243867 - Zfp248 protein_coding retained_intron MGP_CBAJ_T0079245.1 MGP_CBAJ_G0030849.1 mouse_genomes_project 6 129241563 129243152 - Zfp248 protein_coding processed_transcript MGP_CBAJ_T0078549.1 MGP_CBAJ_G0030718.1 mouse_genomes_project 6 99493190 99500123 + Ccdc174 protein_coding retained_intron MGP_CBAJ_T0078550.1 MGP_CBAJ_G0030718.1 mouse_genomes_project 6 99493190 99516350 + MGP_CBAJ_P0078550 Ccdc174 protein_coding protein_coding MGP_CBAJ_T0078551.1 MGP_CBAJ_G0030718.1 mouse_genomes_project 6 99493190 99516350 + MGP_CBAJ_P0078551 Ccdc174 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078552.1 MGP_CBAJ_G0030718.1 mouse_genomes_project 6 99493209 99495647 + Ccdc174 protein_coding retained_intron MGP_CBAJ_T0078553.1 MGP_CBAJ_G0030718.1 mouse_genomes_project 6 99493212 99503442 + Ccdc174 protein_coding retained_intron MGP_CBAJ_T0078554.1 MGP_CBAJ_G0030718.1 mouse_genomes_project 6 99508853 99511800 + Ccdc174 protein_coding retained_intron MGP_CBAJ_T0078555.1 MGP_CBAJ_G0030718.1 mouse_genomes_project 6 99509310 99511846 + Ccdc174 protein_coding retained_intron MGP_CBAJ_T0010664.1 MGP_CBAJ_G0008802.1 mouse_genomes_project 6 98180352 98180479 - Gm24816 miRNA miRNA MGP_CBAJ_T0005000.1 MGP_CBAJ_G0004263.1 mouse_genomes_project 6 136747551 136796651 - Gm43989 antisense antisense MGP_CBAJ_T0077722.1 MGP_CBAJ_G0030553.1 mouse_genomes_project 6 78582428 78583173 - MGP_CBAJ_P0077722 protein_coding protein_coding MGP_CBAJ_T0002079.1 MGP_CBAJ_G0001995.1 mouse_genomes_project 6 118154854 118156040 - TEC TEC MGP_CBAJ_T0078653.1 MGP_CBAJ_G0030743.1 mouse_genomes_project 6 105511795 105737310 - MGP_CBAJ_P0078653 Frmd4b protein_coding protein_coding MGP_CBAJ_T0078654.1 MGP_CBAJ_G0030743.1 mouse_genomes_project 6 105511964 105516184 - Frmd4b protein_coding retained_intron MGP_CBAJ_T0078655.1 MGP_CBAJ_G0030743.1 mouse_genomes_project 6 105512014 105546732 - Frmd4b protein_coding processed_transcript MGP_CBAJ_T0078656.1 MGP_CBAJ_G0030743.1 mouse_genomes_project 6 105512020 105703985 - MGP_CBAJ_P0078656 Frmd4b protein_coding protein_coding MGP_CBAJ_T0078657.1 MGP_CBAJ_G0030743.1 mouse_genomes_project 6 105539712 105546782 - Frmd4b protein_coding retained_intron MGP_CBAJ_T0078658.1 MGP_CBAJ_G0030743.1 mouse_genomes_project 6 105540636 105560233 - Frmd4b protein_coding processed_transcript MGP_CBAJ_T0078659.1 MGP_CBAJ_G0030743.1 mouse_genomes_project 6 105541190 105590272 - Frmd4b protein_coding retained_intron MGP_CBAJ_T0078660.1 MGP_CBAJ_G0030743.1 mouse_genomes_project 6 105559750 105627407 - Frmd4b protein_coding processed_transcript MGP_CBAJ_T0078661.1 MGP_CBAJ_G0030743.1 mouse_genomes_project 6 105560408 105737359 - Frmd4b protein_coding processed_transcript MGP_CBAJ_T0078662.1 MGP_CBAJ_G0030743.1 mouse_genomes_project 6 105587027 105876141 - Frmd4b protein_coding retained_intron MGP_CBAJ_T0078663.1 MGP_CBAJ_G0030743.1 mouse_genomes_project 6 105626459 105627375 - Frmd4b protein_coding retained_intron MGP_CBAJ_T0078664.1 MGP_CBAJ_G0030743.1 mouse_genomes_project 6 105626927 105669594 - MGP_CBAJ_P0078664 Frmd4b protein_coding protein_coding MGP_CBAJ_T0015151.1 MGP_CBAJ_G0013263.1 mouse_genomes_project 6 65124433 65124857 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015403.1 MGP_CBAJ_G0013515.1 mouse_genomes_project 6 145460157 145460374 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004986.1 MGP_CBAJ_G0004249.1 mouse_genomes_project 6 125834921 125848082 - Gm44079 antisense antisense MGP_CBAJ_T0002528.1 MGP_CBAJ_G0002431.1 mouse_genomes_project 6 42771956 42772006 + MGP_CBAJ_P0002528 Trbj2-1 TR_J_gene TR_J_gene MGP_CBAJ_T0077255.1 MGP_CBAJ_G0030432.1 mouse_genomes_project 6 57537719 57560392 + MGP_CBAJ_P0077255 Mturn protein_coding protein_coding MGP_CBAJ_T0077256.1 MGP_CBAJ_G0030432.1 mouse_genomes_project 6 57537849 57557683 + MGP_CBAJ_P0077256 Mturn protein_coding protein_coding MGP_CBAJ_T0077257.1 MGP_CBAJ_G0030432.1 mouse_genomes_project 6 57537897 57545617 + Mturn protein_coding retained_intron MGP_CBAJ_T0002060.1 MGP_CBAJ_G0001976.1 mouse_genomes_project 6 108178925 108182702 - TEC TEC MGP_CBAJ_T0080561.1 MGP_CBAJ_G0031149.1 mouse_genomes_project 6 161040370 161492676 - MGP_CBAJ_P0080561 Itpr2 protein_coding protein_coding MGP_CBAJ_T0080562.1 MGP_CBAJ_G0031149.1 mouse_genomes_project 6 161040375 161492376 - MGP_CBAJ_P0080562 Itpr2 protein_coding unknown_likely_coding MGP_CBAJ_T0080563.1 MGP_CBAJ_G0031149.1 mouse_genomes_project 6 161043551 161492410 - MGP_CBAJ_P0080563 Itpr2 protein_coding protein_coding MGP_CBAJ_T0080564.1 MGP_CBAJ_G0031149.1 mouse_genomes_project 6 161052666 161079268 - Itpr2 protein_coding processed_transcript MGP_CBAJ_T0080565.1 MGP_CBAJ_G0031149.1 mouse_genomes_project 6 161120765 161179084 - MGP_CBAJ_P0080565 Itpr2 protein_coding protein_coding MGP_CBAJ_T0080566.1 MGP_CBAJ_G0031149.1 mouse_genomes_project 6 161120840 161143009 - Itpr2 protein_coding processed_transcript MGP_CBAJ_T0080567.1 MGP_CBAJ_G0031149.1 mouse_genomes_project 6 161182516 161184020 - Itpr2 protein_coding retained_intron MGP_CBAJ_T0080568.1 MGP_CBAJ_G0031149.1 mouse_genomes_project 6 161247137 161250932 - Itpr2 protein_coding retained_intron MGP_CBAJ_T0080569.1 MGP_CBAJ_G0031149.1 mouse_genomes_project 6 161323493 161376199 - MGP_CBAJ_P0080569 Itpr2 protein_coding protein_coding MGP_CBAJ_T0080570.1 MGP_CBAJ_G0031149.1 mouse_genomes_project 6 161341784 161492721 - MGP_CBAJ_P0080570 Itpr2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080571.1 MGP_CBAJ_G0031149.1 mouse_genomes_project 6 161355191 161492676 - Itpr2 protein_coding retained_intron MGP_CBAJ_T0080572.1 MGP_CBAJ_G0031149.1 mouse_genomes_project 6 161401386 161492376 - Itpr2 protein_coding processed_transcript MGP_CBAJ_T0005031.1 MGP_CBAJ_G0004288.1 mouse_genomes_project 6 152698548 152723452 + B230110G15Rik antisense antisense MGP_CBAJ_T0002143.1 MGP_CBAJ_G0002058.1 mouse_genomes_project 6 161221849 161224198 - TEC TEC MGP_CBAJ_T0001879.1 MGP_CBAJ_G0001795.1 mouse_genomes_project 6 2225006 2226832 + TEC TEC MGP_CBAJ_T0000169.1 MGP_CBAJ_G0000127.1 mouse_genomes_project 6 73480562 73481107 - MGP_CBAJ_P0000169 Igkv4-91 IG_V_gene IG_V_gene MGP_CBAJ_T0015392.1 MGP_CBAJ_G0013504.1 mouse_genomes_project 6 142993228 142993340 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008522.1 MGP_CBAJ_G0006880.1 mouse_genomes_project 6 76575982 76585119 + Gm1070 lincRNA lincRNA MGP_CBAJ_T0098500.1 MGP_CBAJ_G0036756.1 mouse_genomes_project 6 42176942 42187996 + Gm37610 sense_overlapping sense_overlapping MGP_CBAJ_T0008680.1 MGP_CBAJ_G0007001.1 mouse_genomes_project 6 163844284 163847232 - Gm6313 lincRNA lincRNA MGP_CBAJ_T0008681.1 MGP_CBAJ_G0007001.1 mouse_genomes_project 6 163844284 163851808 - Gm6313 lincRNA lincRNA MGP_CBAJ_T0076056.1 MGP_CBAJ_G0030155.1 mouse_genomes_project 6 20674540 20702580 + MGP_CBAJ_P0076056 Ing3 protein_coding protein_coding MGP_CBAJ_T0076057.1 MGP_CBAJ_G0030155.1 mouse_genomes_project 6 20674623 20701072 + Ing3 protein_coding retained_intron MGP_CBAJ_T0076058.1 MGP_CBAJ_G0030155.1 mouse_genomes_project 6 20674628 20700673 + MGP_CBAJ_P0076058 Ing3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076059.1 MGP_CBAJ_G0030155.1 mouse_genomes_project 6 20674631 20701445 + MGP_CBAJ_P0076059 Ing3 protein_coding protein_coding MGP_CBAJ_T0076060.1 MGP_CBAJ_G0030155.1 mouse_genomes_project 6 20674644 20696606 + MGP_CBAJ_P0076060 Ing3 protein_coding protein_coding MGP_CBAJ_T0076061.1 MGP_CBAJ_G0030155.1 mouse_genomes_project 6 20674659 20700268 + MGP_CBAJ_P0076061 Ing3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076062.1 MGP_CBAJ_G0030155.1 mouse_genomes_project 6 20674994 20694315 + MGP_CBAJ_P0076062 Ing3 protein_coding protein_coding MGP_CBAJ_T0076063.1 MGP_CBAJ_G0030155.1 mouse_genomes_project 6 20677031 20679231 + Ing3 protein_coding retained_intron MGP_CBAJ_T0078442.1 MGP_CBAJ_G0030696.1 mouse_genomes_project 6 97583088 97585655 + MGP_CBAJ_P0078442 Vmn1r51 protein_coding protein_coding MGP_CBAJ_T0015101.1 MGP_CBAJ_G0013213.1 mouse_genomes_project 6 46489155 46489858 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002136.1 MGP_CBAJ_G0002051.1 mouse_genomes_project 6 155929563 155933107 + TEC TEC MGP_CBAJ_T0079094.1 MGP_CBAJ_G0030821.1 mouse_genomes_project 6 126245023 126250584 - MGP_CBAJ_P0079094 Rpl32 protein_coding protein_coding MGP_CBAJ_T0079095.1 MGP_CBAJ_G0030821.1 mouse_genomes_project 6 126245030 126250185 - MGP_CBAJ_P0079095 Rpl32 protein_coding protein_coding MGP_CBAJ_T0015434.1 MGP_CBAJ_G0013546.1 mouse_genomes_project 6 156652347 156653417 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100670.1 MGP_CBAJ_G0038925.1 mouse_genomes_project 6 61133127 61133256 - Gm25726 snoRNA snoRNA MGP_CBAJ_T0001941.1 MGP_CBAJ_G0001857.1 mouse_genomes_project 6 48112674 48115204 + TEC TEC MGP_CBAJ_T0015112.1 MGP_CBAJ_G0013224.1 mouse_genomes_project 6 51080251 51080580 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099438.1 MGP_CBAJ_G0037693.1 mouse_genomes_project 6 82150043 82150204 - Gm22283 snRNA snRNA MGP_CBAJ_T0008564.1 MGP_CBAJ_G0006913.1 mouse_genomes_project 6 96653115 96670742 - Gm44205 lincRNA lincRNA MGP_CBAJ_T0008565.1 MGP_CBAJ_G0006913.1 mouse_genomes_project 6 96653121 96656809 - Gm44205 lincRNA lincRNA MGP_CBAJ_T0008566.1 MGP_CBAJ_G0006913.1 mouse_genomes_project 6 96669667 96670711 - Gm44205 lincRNA lincRNA MGP_CBAJ_T0001930.1 MGP_CBAJ_G0001846.1 mouse_genomes_project 6 46902712 46904976 + TEC TEC MGP_CBAJ_T0015161.1 MGP_CBAJ_G0013273.1 mouse_genomes_project 6 69102588 69103150 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0079050.1 MGP_CBAJ_G0030811.1 mouse_genomes_project 6 125493616 125649472 + Syn2 protein_coding retained_intron MGP_CBAJ_T0079051.1 MGP_CBAJ_G0030811.1 mouse_genomes_project 6 125493616 125650940 + MGP_CBAJ_P0079051 Syn2 protein_coding protein_coding MGP_CBAJ_T0079052.1 MGP_CBAJ_G0030811.1 mouse_genomes_project 6 125493631 125656372 + MGP_CBAJ_P0079052 Syn2 protein_coding protein_coding MGP_CBAJ_T0079053.1 MGP_CBAJ_G0030811.1 mouse_genomes_project 6 125493664 125650940 + MGP_CBAJ_P0079053 Syn2 protein_coding protein_coding MGP_CBAJ_T0079054.1 MGP_CBAJ_G0030811.1 mouse_genomes_project 6 125586962 125618981 + Syn2 protein_coding processed_transcript MGP_CBAJ_T0079056.1 MGP_CBAJ_G0030811.1 mouse_genomes_project 6 125613850 125650940 + Syn2 protein_coding processed_transcript MGP_CBAJ_T0079059.1 MGP_CBAJ_G0030811.1 mouse_genomes_project 6 125627813 125653077 + Syn2 protein_coding retained_intron MGP_CBAJ_T0079812.1 MGP_CBAJ_G0030956.1 mouse_genomes_project 6 137063643 137074339 - MGP_CBAJ_P0079812 Tuba3a protein_coding protein_coding MGP_CBAJ_T0015332.1 MGP_CBAJ_G0013444.1 mouse_genomes_project 6 126207357 126207750 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000154.1 MGP_CBAJ_G0000117.1 mouse_genomes_project 6 73085577 73086063 + MGP_CBAJ_P0000154 Igkv15-103 IG_V_gene IG_V_gene MGP_CBAJ_T0008615.1 MGP_CBAJ_G0006954.1 mouse_genomes_project 6 131648401 131656408 + 1700072O05Rik lincRNA lincRNA MGP_CBAJ_T0078326.1 MGP_CBAJ_G0030672.1 mouse_genomes_project 6 95608683 95811876 - MGP_CBAJ_P0078326 Eefsec protein_coding protein_coding MGP_CBAJ_T0078327.1 MGP_CBAJ_G0030672.1 mouse_genomes_project 6 95609222 95811864 - MGP_CBAJ_P0078327 Eefsec protein_coding protein_coding MGP_CBAJ_T0078328.1 MGP_CBAJ_G0030672.1 mouse_genomes_project 6 95609622 95811851 - MGP_CBAJ_P0078328 Eefsec protein_coding protein_coding MGP_CBAJ_T0078329.1 MGP_CBAJ_G0030672.1 mouse_genomes_project 6 95632988 95811839 - MGP_CBAJ_P0078329 Eefsec protein_coding protein_coding MGP_CBAJ_T0078330.1 MGP_CBAJ_G0030672.1 mouse_genomes_project 6 95648284 95805179 - MGP_CBAJ_P0078330 Eefsec protein_coding protein_coding MGP_CBAJ_T0078331.1 MGP_CBAJ_G0030672.1 mouse_genomes_project 6 95648467 95811821 - MGP_CBAJ_P0078331 Eefsec protein_coding nonsense_mediated_decay MGP_CBAJ_T0002090.1 MGP_CBAJ_G0002006.1 mouse_genomes_project 6 126756778 126760374 - TEC TEC MGP_CBAJ_T0002058.1 MGP_CBAJ_G0001974.1 mouse_genomes_project 6 105343294 105346821 + TEC TEC MGP_CBAJ_T0098446.1 MGP_CBAJ_G0036708.1 mouse_genomes_project 6 141961669 141962263 + Gm43914 sense_intronic sense_intronic MGP_CBAJ_T0001939.1 MGP_CBAJ_G0001855.1 mouse_genomes_project 6 47734916 47738296 + TEC TEC MGP_CBAJ_T0078081.1 MGP_CBAJ_G0030624.1 mouse_genomes_project 6 92640206 92847653 + MGP_CBAJ_P0078081 Alms1 protein_coding unknown_likely_coding MGP_CBAJ_T0078082.1 MGP_CBAJ_G0030624.1 mouse_genomes_project 6 92640228 92847406 + MGP_CBAJ_P0078082 Alms1 protein_coding unknown_likely_coding MGP_CBAJ_T0078083.1 MGP_CBAJ_G0030624.1 mouse_genomes_project 6 92640272 92735092 + MGP_CBAJ_P0078083 Alms1 protein_coding protein_coding MGP_CBAJ_T0078084.1 MGP_CBAJ_G0030624.1 mouse_genomes_project 6 92695939 92698668 + Alms1 protein_coding retained_intron MGP_CBAJ_T0078085.1 MGP_CBAJ_G0030624.1 mouse_genomes_project 6 92703206 92707984 + Alms1 protein_coding retained_intron MGP_CBAJ_T0078086.1 MGP_CBAJ_G0030624.1 mouse_genomes_project 6 92784915 92791153 + Alms1 protein_coding retained_intron MGP_CBAJ_T0000194.1 MGP_CBAJ_G0000145.1 mouse_genomes_project 6 75031182 75031750 - MGP_CBAJ_P0000194 Igkv7-33 IG_V_gene IG_V_gene MGP_CBAJ_T0000195.1 MGP_CBAJ_G0000145.1 mouse_genomes_project 6 75031182 75031750 - MGP_CBAJ_P0000195 Igkv7-33 IG_V_gene IG_V_gene MGP_CBAJ_T0015276.1 MGP_CBAJ_G0013388.1 mouse_genomes_project 6 102797796 102798786 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015444.1 MGP_CBAJ_G0013556.1 mouse_genomes_project 6 164175615 164175786 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0077276.1 MGP_CBAJ_G0030437.1 mouse_genomes_project 6 58005995 58049056 - MGP_CBAJ_P0077276 Crhr2 protein_coding protein_coding MGP_CBAJ_T0077277.1 MGP_CBAJ_G0030437.1 mouse_genomes_project 6 58007131 58033933 - MGP_CBAJ_P0077277 Crhr2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077278.1 MGP_CBAJ_G0030437.1 mouse_genomes_project 6 58007158 58033861 - MGP_CBAJ_P0077278 Crhr2 protein_coding protein_coding MGP_CBAJ_T0077279.1 MGP_CBAJ_G0030437.1 mouse_genomes_project 6 58007223 58033719 - MGP_CBAJ_P0077279 Crhr2 protein_coding unknown_likely_coding MGP_CBAJ_T0077280.1 MGP_CBAJ_G0030437.1 mouse_genomes_project 6 58007965 58048883 - MGP_CBAJ_P0077280 Crhr2 protein_coding protein_coding MGP_CBAJ_T0077281.1 MGP_CBAJ_G0030437.1 mouse_genomes_project 6 58008903 58016514 - Crhr2 protein_coding retained_intron MGP_CBAJ_T0077282.1 MGP_CBAJ_G0030437.1 mouse_genomes_project 6 58014567 58049058 - Crhr2 protein_coding retained_intron MGP_CBAJ_T0077283.1 MGP_CBAJ_G0030437.1 mouse_genomes_project 6 58020690 58033719 - Crhr2 protein_coding retained_intron MGP_CBAJ_T0076780.1 MGP_CBAJ_G0030312.1 mouse_genomes_project 6 43283319 43287731 + MGP_CBAJ_P0076780 Sva protein_coding protein_coding MGP_CBAJ_T0076781.1 MGP_CBAJ_G0030312.1 mouse_genomes_project 6 43283319 43287737 + MGP_CBAJ_P0076781 Sva protein_coding protein_coding MGP_CBAJ_T0102030.1 MGP_CBAJ_G0040060.1 mouse_genomes_project 6 142992465 143005567 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015438.1 MGP_CBAJ_G0013550.1 mouse_genomes_project 6 161672684 161673032 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002139.1 MGP_CBAJ_G0002054.1 mouse_genomes_project 6 160133155 160135716 - TEC TEC MGP_CBAJ_T0077756.1 MGP_CBAJ_G0030561.1 mouse_genomes_project 6 84525492 84528611 + MGP_CBAJ_P0077756 Reg3a protein_coding protein_coding MGP_CBAJ_T0000269.1 MGP_CBAJ_G0000214.1 mouse_genomes_project 6 72936065 72937179 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0078258.1 MGP_CBAJ_G0030659.1 mouse_genomes_project 6 95021365 95024490 + Efcc1 protein_coding retained_intron MGP_CBAJ_T0078259.1 MGP_CBAJ_G0030659.1 mouse_genomes_project 6 95021365 95048652 + MGP_CBAJ_P0078259 Efcc1 protein_coding protein_coding MGP_CBAJ_T0078260.1 MGP_CBAJ_G0030659.1 mouse_genomes_project 6 95021389 95049116 + MGP_CBAJ_P0078260 Efcc1 protein_coding protein_coding MGP_CBAJ_T0078261.1 MGP_CBAJ_G0030659.1 mouse_genomes_project 6 95023305 95042379 + Efcc1 protein_coding processed_transcript MGP_CBAJ_T0078262.1 MGP_CBAJ_G0030659.1 mouse_genomes_project 6 95046722 95047963 + Efcc1 protein_coding retained_intron MGP_CBAJ_T0079532.1 MGP_CBAJ_G0030901.1 mouse_genomes_project 6 134631707 134671181 + MGP_CBAJ_P0079532 Clec4a2 protein_coding protein_coding MGP_CBAJ_T0079533.1 MGP_CBAJ_G0030901.1 mouse_genomes_project 6 134670199 134675487 + MGP_CBAJ_P0079533 Clec4a2 protein_coding protein_coding MGP_CBAJ_T0079534.1 MGP_CBAJ_G0030901.1 mouse_genomes_project 6 134670201 134687023 + MGP_CBAJ_P0079534 Clec4a2 protein_coding protein_coding MGP_CBAJ_T0079535.1 MGP_CBAJ_G0030901.1 mouse_genomes_project 6 134670827 134688586 + MGP_CBAJ_P0079535 Clec4a2 protein_coding protein_coding MGP_CBAJ_T0079536.1 MGP_CBAJ_G0030901.1 mouse_genomes_project 6 134670978 134687365 + MGP_CBAJ_P0079536 Clec4a2 protein_coding protein_coding MGP_CBAJ_T0001929.1 MGP_CBAJ_G0001845.1 mouse_genomes_project 6 46880290 46881553 + TEC TEC MGP_CBAJ_T0004861.1 MGP_CBAJ_G0004170.1 mouse_genomes_project 6 43608041 43617928 + 2010310C07Rik antisense antisense MGP_CBAJ_T0004862.1 MGP_CBAJ_G0004170.1 mouse_genomes_project 6 43615328 43618588 + 2010310C07Rik antisense antisense MGP_CBAJ_T0080419.1 MGP_CBAJ_G0031124.1 mouse_genomes_project 6 156854883 156860422 + MGP_CBAJ_P0080419 Iapp protein_coding protein_coding MGP_CBAJ_T0080420.1 MGP_CBAJ_G0031124.1 mouse_genomes_project 6 156854907 156855527 + Iapp protein_coding processed_transcript MGP_CBAJ_T0076368.1 MGP_CBAJ_G0030216.1 mouse_genomes_project 6 30469366 30475511 + MGP_CBAJ_P0076368 Cpa1 protein_coding protein_coding MGP_CBAJ_T0076369.1 MGP_CBAJ_G0030216.1 mouse_genomes_project 6 30470488 30472022 + Cpa1 protein_coding retained_intron MGP_CBAJ_T0076064.1 MGP_CBAJ_G0030156.1 mouse_genomes_project 6 20715350 21033562 + MGP_CBAJ_P0076064 Cped1 protein_coding protein_coding MGP_CBAJ_T0076065.1 MGP_CBAJ_G0030156.1 mouse_genomes_project 6 20715378 20740528 + Cped1 protein_coding processed_transcript MGP_CBAJ_T0076066.1 MGP_CBAJ_G0030156.1 mouse_genomes_project 6 20715378 20870657 + MGP_CBAJ_P0076066 Cped1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076067.1 MGP_CBAJ_G0030156.1 mouse_genomes_project 6 20716030 20869684 + MGP_CBAJ_P0076067 Cped1 protein_coding protein_coding MGP_CBAJ_T0076068.1 MGP_CBAJ_G0030156.1 mouse_genomes_project 6 20716326 20800791 + Cped1 protein_coding processed_transcript MGP_CBAJ_T0076069.1 MGP_CBAJ_G0030156.1 mouse_genomes_project 6 20747944 21013824 + MGP_CBAJ_P0076069 Cped1 protein_coding protein_coding MGP_CBAJ_T0076070.1 MGP_CBAJ_G0030156.1 mouse_genomes_project 6 20756797 20819740 + Cped1 protein_coding processed_transcript MGP_CBAJ_T0076071.1 MGP_CBAJ_G0030156.1 mouse_genomes_project 6 20881193 20895545 + Cped1 protein_coding retained_intron MGP_CBAJ_T0101330.1 MGP_CBAJ_G0039426.1 mouse_genomes_project 6 49896341 49909524 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101331.1 MGP_CBAJ_G0039426.1 mouse_genomes_project 6 49896365 49903124 + transcribed_unprocessed_pseudogene retained_intron MGP_CBAJ_T0101332.1 MGP_CBAJ_G0039426.1 mouse_genomes_project 6 49896373 49903140 + transcribed_unprocessed_pseudogene retained_intron MGP_CBAJ_T0101333.1 MGP_CBAJ_G0039426.1 mouse_genomes_project 6 49896378 49908128 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101334.1 MGP_CBAJ_G0039426.1 mouse_genomes_project 6 49896378 49901706 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101335.1 MGP_CBAJ_G0039426.1 mouse_genomes_project 6 49896420 49908549 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101336.1 MGP_CBAJ_G0039426.1 mouse_genomes_project 6 49900438 49903964 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101337.1 MGP_CBAJ_G0039426.1 mouse_genomes_project 6 49900506 49906313 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101338.1 MGP_CBAJ_G0039426.1 mouse_genomes_project 6 49900897 49910898 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101339.1 MGP_CBAJ_G0039426.1 mouse_genomes_project 6 49900910 49908550 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101340.1 MGP_CBAJ_G0039426.1 mouse_genomes_project 6 49901652 49908549 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0002123.1 MGP_CBAJ_G0002038.1 mouse_genomes_project 6 148788639 148788895 - TEC TEC MGP_CBAJ_T0079920.1 MGP_CBAJ_G0030982.1 mouse_genomes_project 6 140467283 140517122 - MGP_CBAJ_P0079920 Tead4 protein_coding protein_coding MGP_CBAJ_T0079921.1 MGP_CBAJ_G0030982.1 mouse_genomes_project 6 140512835 140542757 - MGP_CBAJ_P0079921 Tead4 protein_coding protein_coding MGP_CBAJ_T0079922.1 MGP_CBAJ_G0030982.1 mouse_genomes_project 6 140512885 140542672 - MGP_CBAJ_P0079922 Tead4 protein_coding protein_coding MGP_CBAJ_T0002621.1 MGP_CBAJ_G0002508.1 mouse_genomes_project 6 42232801 42233240 + MGP_CBAJ_P0002621 Trbv13-3 TR_V_gene TR_V_gene MGP_CBAJ_T0080714.1 MGP_CBAJ_G0031173.1 mouse_genomes_project 6 164468662 164505687 - MGP_CBAJ_P0080714 Amn1 protein_coding protein_coding MGP_CBAJ_T0080715.1 MGP_CBAJ_G0031173.1 mouse_genomes_project 6 164468782 164486694 - Amn1 protein_coding retained_intron MGP_CBAJ_T0080716.1 MGP_CBAJ_G0031173.1 mouse_genomes_project 6 164469092 164505639 - Amn1 protein_coding processed_transcript MGP_CBAJ_T0080717.1 MGP_CBAJ_G0031173.1 mouse_genomes_project 6 164469093 164505660 - MGP_CBAJ_P0080717 Amn1 protein_coding protein_coding MGP_CBAJ_T0080718.1 MGP_CBAJ_G0031173.1 mouse_genomes_project 6 164469098 164499787 - Amn1 protein_coding processed_transcript MGP_CBAJ_T0080719.1 MGP_CBAJ_G0031173.1 mouse_genomes_project 6 164469099 164505618 - MGP_CBAJ_P0080719 Amn1 protein_coding unknown_likely_coding MGP_CBAJ_T0080720.1 MGP_CBAJ_G0031173.1 mouse_genomes_project 6 164469114 164499784 - MGP_CBAJ_P0080720 Amn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080721.1 MGP_CBAJ_G0031173.1 mouse_genomes_project 6 164478458 164505656 - Amn1 protein_coding processed_transcript MGP_CBAJ_T0080722.1 MGP_CBAJ_G0031173.1 mouse_genomes_project 6 164482725 164505645 - Amn1 protein_coding retained_intron MGP_CBAJ_T0080723.1 MGP_CBAJ_G0031173.1 mouse_genomes_project 6 164482891 164505670 - Amn1 protein_coding processed_transcript MGP_CBAJ_T0080724.1 MGP_CBAJ_G0031173.1 mouse_genomes_project 6 164484196 164505662 - MGP_CBAJ_P0080724 Amn1 protein_coding protein_coding MGP_CBAJ_T0080725.1 MGP_CBAJ_G0031173.1 mouse_genomes_project 6 164486184 164505677 - Amn1 protein_coding retained_intron MGP_CBAJ_T0008686.1 MGP_CBAJ_G0007006.1 mouse_genomes_project 6 164520853 164537507 - 1700003I16Rik lincRNA lincRNA MGP_CBAJ_T0002127.1 MGP_CBAJ_G0002042.1 mouse_genomes_project 6 150995555 150996610 - TEC TEC MGP_CBAJ_T0080038.1 MGP_CBAJ_G0031014.1 mouse_genomes_project 6 142132466 142141788 + MGP_CBAJ_P0080038 Klre1 protein_coding protein_coding MGP_CBAJ_T0080039.1 MGP_CBAJ_G0031014.1 mouse_genomes_project 6 142132812 142141738 + MGP_CBAJ_P0080039 Klre1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080040.1 MGP_CBAJ_G0031014.1 mouse_genomes_project 6 142137972 142141785 + Klre1 protein_coding retained_intron MGP_CBAJ_T0080551.1 MGP_CBAJ_G0031146.1 mouse_genomes_project 6 160697617 160777302 + MGP_CBAJ_P0080551 Rassf8 protein_coding protein_coding MGP_CBAJ_T0080552.1 MGP_CBAJ_G0031146.1 mouse_genomes_project 6 160701440 160771411 + MGP_CBAJ_P0080552 Rassf8 protein_coding protein_coding MGP_CBAJ_T0080553.1 MGP_CBAJ_G0031146.1 mouse_genomes_project 6 160764674 160773807 + MGP_CBAJ_P0080553 Rassf8 protein_coding protein_coding MGP_CBAJ_T0080554.1 MGP_CBAJ_G0031146.1 mouse_genomes_project 6 160771141 160777297 + MGP_CBAJ_P0080554 Rassf8 protein_coding protein_coding MGP_CBAJ_T0101983.1 MGP_CBAJ_G0040014.1 mouse_genomes_project 6 44208604 44208918 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0002099.1 MGP_CBAJ_G0002014.1 mouse_genomes_project 6 134280438 134282806 + TEC TEC MGP_CBAJ_T0077384.1 MGP_CBAJ_G0030476.1 mouse_genomes_project 6 61262608 61263661 - MGP_CBAJ_P0077384 Vmn1r25 protein_coding protein_coding MGP_CBAJ_T0077700.1 MGP_CBAJ_G0030548.1 mouse_genomes_project 6 78123739 78156143 - MGP_CBAJ_P0077700 Elmod3 protein_coding protein_coding MGP_CBAJ_T0077701.1 MGP_CBAJ_G0030548.1 mouse_genomes_project 6 78123751 78156144 - MGP_CBAJ_P0077701 Elmod3 protein_coding protein_coding MGP_CBAJ_T0077702.1 MGP_CBAJ_G0030548.1 mouse_genomes_project 6 78125325 78156196 - MGP_CBAJ_P0077702 Elmod3 protein_coding protein_coding MGP_CBAJ_T0077703.1 MGP_CBAJ_G0030548.1 mouse_genomes_project 6 78127111 78156162 - MGP_CBAJ_P0077703 Elmod3 protein_coding protein_coding MGP_CBAJ_T0077704.1 MGP_CBAJ_G0030548.1 mouse_genomes_project 6 78142258 78152839 - Elmod3 protein_coding processed_transcript MGP_CBAJ_T0077705.1 MGP_CBAJ_G0030548.1 mouse_genomes_project 6 78145459 78156214 - MGP_CBAJ_P0077705 Elmod3 protein_coding protein_coding MGP_CBAJ_T0008526.1 MGP_CBAJ_G0006884.1 mouse_genomes_project 6 76762160 76778576 + lincRNA lincRNA MGP_CBAJ_T0005016.1 MGP_CBAJ_G0004275.1 mouse_genomes_project 6 141413777 141443564 - Gm15987 antisense antisense MGP_CBAJ_T0015117.1 MGP_CBAJ_G0013229.1 mouse_genomes_project 6 51227271 51227578 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0078792.1 MGP_CBAJ_G0030767.1 mouse_genomes_project 6 118230388 118239303 + MGP_CBAJ_P0078792 Bhlhe40 protein_coding protein_coding MGP_CBAJ_T0078793.1 MGP_CBAJ_G0030767.1 mouse_genomes_project 6 118230558 118231094 + Bhlhe40 protein_coding retained_intron MGP_CBAJ_T0078794.1 MGP_CBAJ_G0030767.1 mouse_genomes_project 6 118230633 118232459 + MGP_CBAJ_P0078794 Bhlhe40 protein_coding protein_coding MGP_CBAJ_T0078795.1 MGP_CBAJ_G0030767.1 mouse_genomes_project 6 118235417 118238043 + Bhlhe40 protein_coding retained_intron MGP_CBAJ_T0079935.1 MGP_CBAJ_G0030985.1 mouse_genomes_project 6 140627120 140633120 + Foxm1 protein_coding processed_transcript MGP_CBAJ_T0079936.1 MGP_CBAJ_G0030985.1 mouse_genomes_project 6 140627120 140640285 + MGP_CBAJ_P0079936 Foxm1 protein_coding protein_coding MGP_CBAJ_T0079937.1 MGP_CBAJ_G0030985.1 mouse_genomes_project 6 140629862 140638105 + MGP_CBAJ_P0079937 Foxm1 protein_coding protein_coding MGP_CBAJ_T0079938.1 MGP_CBAJ_G0030985.1 mouse_genomes_project 6 140630324 140637497 + MGP_CBAJ_P0079938 Foxm1 protein_coding protein_coding MGP_CBAJ_T0079939.1 MGP_CBAJ_G0030985.1 mouse_genomes_project 6 140631444 140637010 + MGP_CBAJ_P0079939 Foxm1 protein_coding protein_coding MGP_CBAJ_T0079940.1 MGP_CBAJ_G0030985.1 mouse_genomes_project 6 140631522 140636310 + Foxm1 protein_coding retained_intron MGP_CBAJ_T0079941.1 MGP_CBAJ_G0030985.1 mouse_genomes_project 6 140633597 140635510 + Foxm1 protein_coding retained_intron MGP_CBAJ_T0079942.1 MGP_CBAJ_G0030985.1 mouse_genomes_project 6 140635098 140637321 + Foxm1 protein_coding retained_intron MGP_CBAJ_T0008559.1 MGP_CBAJ_G0006911.1 mouse_genomes_project 6 96513574 96519633 + Gm1965 lincRNA lincRNA MGP_CBAJ_T0008560.1 MGP_CBAJ_G0006911.1 mouse_genomes_project 6 96513585 96519616 + Gm1965 lincRNA lincRNA MGP_CBAJ_T0008561.1 MGP_CBAJ_G0006911.1 mouse_genomes_project 6 96513585 96519651 + Gm1965 lincRNA lincRNA MGP_CBAJ_T0008562.1 MGP_CBAJ_G0006911.1 mouse_genomes_project 6 96513585 96519089 + Gm1965 lincRNA lincRNA MGP_CBAJ_T0002084.1 MGP_CBAJ_G0002000.1 mouse_genomes_project 6 123633587 123636698 + TEC TEC MGP_CBAJ_T0005034.1 MGP_CBAJ_G0004291.1 mouse_genomes_project 6 157876601 157897086 - 1700126G02Rik antisense antisense MGP_CBAJ_T0102019.1 MGP_CBAJ_G0040050.1 mouse_genomes_project 6 135010709 135011466 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0079755.1 MGP_CBAJ_G0030946.1 mouse_genomes_project 6 136825298 136839821 + MGP_CBAJ_P0079755 Lpar5 protein_coding protein_coding MGP_CBAJ_T0079756.1 MGP_CBAJ_G0030946.1 mouse_genomes_project 6 136828642 136839157 + MGP_CBAJ_P0079756 Lpar5 protein_coding protein_coding MGP_CBAJ_T0079757.1 MGP_CBAJ_G0030946.1 mouse_genomes_project 6 136828642 136839821 + MGP_CBAJ_P0079757 Lpar5 protein_coding protein_coding MGP_CBAJ_T0015026.1 MGP_CBAJ_G0013138.1 mouse_genomes_project 6 8332590 8338762 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008563.1 MGP_CBAJ_G0006912.1 mouse_genomes_project 6 96641525 96642840 - Gm44204 lincRNA lincRNA MGP_CBAJ_T0015290.1 MGP_CBAJ_G0013402.1 mouse_genomes_project 6 109403473 109404056 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0078758.1 MGP_CBAJ_G0030761.1 mouse_genomes_project 6 116176613 116185175 + MGP_CBAJ_P0078758 Trnt1 protein_coding protein_coding MGP_CBAJ_T0078759.1 MGP_CBAJ_G0030761.1 mouse_genomes_project 6 116176634 116189365 + MGP_CBAJ_P0078759 Trnt1 protein_coding protein_coding MGP_CBAJ_T0078760.1 MGP_CBAJ_G0030761.1 mouse_genomes_project 6 116176659 116190384 + MGP_CBAJ_P0078760 Trnt1 protein_coding protein_coding MGP_CBAJ_T0078761.1 MGP_CBAJ_G0030761.1 mouse_genomes_project 6 116176659 116189148 + MGP_CBAJ_P0078761 Trnt1 protein_coding protein_coding MGP_CBAJ_T0078762.1 MGP_CBAJ_G0030761.1 mouse_genomes_project 6 116176663 116177658 + Trnt1 protein_coding retained_intron MGP_CBAJ_T0078763.1 MGP_CBAJ_G0030761.1 mouse_genomes_project 6 116176706 116180549 + Trnt1 protein_coding processed_transcript MGP_CBAJ_T0078764.1 MGP_CBAJ_G0030761.1 mouse_genomes_project 6 116176779 116180845 + MGP_CBAJ_P0078764 Trnt1 protein_coding protein_coding MGP_CBAJ_T0078765.1 MGP_CBAJ_G0030761.1 mouse_genomes_project 6 116177000 116181959 + MGP_CBAJ_P0078765 Trnt1 protein_coding protein_coding MGP_CBAJ_T0002111.1 MGP_CBAJ_G0002026.1 mouse_genomes_project 6 140623664 140624131 + TEC TEC MGP_CBAJ_T0078440.1 MGP_CBAJ_G0030694.1 mouse_genomes_project 6 97573163 97584807 + MGP_CBAJ_P0078440 protein_coding protein_coding MGP_CBAJ_T0076856.1 MGP_CBAJ_G0030340.1 mouse_genomes_project 6 44423860 44437451 + MGP_CBAJ_P0076856 Olfr441 protein_coding protein_coding MGP_CBAJ_T0076858.1 MGP_CBAJ_G0030340.1 mouse_genomes_project 6 44436518 44437451 + MGP_CBAJ_P0076858 Olfr441 protein_coding protein_coding MGP_CBAJ_T0079096.1 MGP_CBAJ_G0030822.1 mouse_genomes_project 6 126252568 126274477 - MGP_CBAJ_P0079096 Efcab12 protein_coding protein_coding MGP_CBAJ_T0079097.1 MGP_CBAJ_G0030822.1 mouse_genomes_project 6 126252734 126274477 - MGP_CBAJ_P0079097 Efcab12 protein_coding protein_coding MGP_CBAJ_T0079098.1 MGP_CBAJ_G0030822.1 mouse_genomes_project 6 126252734 126274477 - MGP_CBAJ_P0079098 Efcab12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0001878.1 MGP_CBAJ_G0001794.1 mouse_genomes_project 6 2151764 2155755 - TEC TEC MGP_CBAJ_T0015196.1 MGP_CBAJ_G0013308.1 mouse_genomes_project 6 72250828 72250989 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0079197.1 MGP_CBAJ_G0030840.1 mouse_genomes_project 6 127265871 127296175 - MGP_CBAJ_P0079197 protein_coding unknown_likely_coding MGP_CBAJ_T0079198.1 MGP_CBAJ_G0030840.1 mouse_genomes_project 6 127266094 127296327 - MGP_CBAJ_P0079198 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080511.1 MGP_CBAJ_G0031140.1 mouse_genomes_project 6 159995261 160067755 + MGP_CBAJ_P0080511 Lrmp protein_coding nonsense_mediated_decay MGP_CBAJ_T0080512.1 MGP_CBAJ_G0031140.1 mouse_genomes_project 6 160001344 160067761 + MGP_CBAJ_P0080512 Lrmp protein_coding protein_coding MGP_CBAJ_T0080513.1 MGP_CBAJ_G0031140.1 mouse_genomes_project 6 160001347 160059545 + Lrmp protein_coding retained_intron MGP_CBAJ_T0080514.1 MGP_CBAJ_G0031140.1 mouse_genomes_project 6 160001386 160048880 + Lrmp protein_coding retained_intron MGP_CBAJ_T0080515.1 MGP_CBAJ_G0031140.1 mouse_genomes_project 6 160021581 160048320 + MGP_CBAJ_P0080515 Lrmp protein_coding protein_coding MGP_CBAJ_T0080516.1 MGP_CBAJ_G0031140.1 mouse_genomes_project 6 160029777 160046541 + Lrmp protein_coding retained_intron MGP_CBAJ_T0080517.1 MGP_CBAJ_G0031140.1 mouse_genomes_project 6 160029777 160048893 + MGP_CBAJ_P0080517 Lrmp protein_coding protein_coding MGP_CBAJ_T0080518.1 MGP_CBAJ_G0031140.1 mouse_genomes_project 6 160029780 160067755 + MGP_CBAJ_P0080518 Lrmp protein_coding protein_coding MGP_CBAJ_T0080519.1 MGP_CBAJ_G0031140.1 mouse_genomes_project 6 160045636 160062446 + Lrmp protein_coding processed_transcript MGP_CBAJ_T0080520.1 MGP_CBAJ_G0031140.1 mouse_genomes_project 6 160060270 160067505 + Lrmp protein_coding retained_intron MGP_CBAJ_T0002052.1 MGP_CBAJ_G0001968.1 mouse_genomes_project 6 99770028 99772955 - TEC TEC MGP_CBAJ_T0078434.1 MGP_CBAJ_G0030691.1 mouse_genomes_project 6 97404766 97412577 + MGP_CBAJ_P0078434 Vmn1r46 protein_coding protein_coding MGP_CBAJ_T0078435.1 MGP_CBAJ_G0030691.1 mouse_genomes_project 6 97411620 97412550 + MGP_CBAJ_P0078435 Vmn1r46 protein_coding protein_coding MGP_CBAJ_T0098081.1 MGP_CBAJ_G0036354.1 mouse_genomes_project 6 154635233 154635337 + n-R5s168 rRNA rRNA MGP_CBAJ_T0002620.1 MGP_CBAJ_G0002507.1 mouse_genomes_project 6 42222062 42222499 + MGP_CBAJ_P0002620 Trbv13-2 TR_V_gene TR_V_gene MGP_CBAJ_T0008587.1 MGP_CBAJ_G0006930.1 mouse_genomes_project 6 110297678 110334713 + lincRNA lincRNA MGP_CBAJ_T0010654.1 MGP_CBAJ_G0008792.1 mouse_genomes_project 6 88481159 88481237 - Mir468 miRNA miRNA MGP_CBAJ_T0015006.1 MGP_CBAJ_G0013118.1 mouse_genomes_project 6 1158876 1159483 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0075938.1 MGP_CBAJ_G0030137.1 mouse_genomes_project 6 12630350 12677272 - MGP_CBAJ_P0075938 Ppp1r3a protein_coding protein_coding MGP_CBAJ_T0079496.1 MGP_CBAJ_G0030889.1 mouse_genomes_project 6 133972383 133989804 + MGP_CBAJ_P0079496 Aicda protein_coding protein_coding MGP_CBAJ_T0079497.1 MGP_CBAJ_G0030889.1 mouse_genomes_project 6 133986093 133988700 + MGP_CBAJ_P0079497 Aicda protein_coding protein_coding MGP_CBAJ_T0015256.1 MGP_CBAJ_G0013368.1 mouse_genomes_project 6 93055985 93056829 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100716.1 MGP_CBAJ_G0038971.1 mouse_genomes_project 6 160381949 160382064 + Gm25373 snoRNA snoRNA MGP_CBAJ_T0078080.1 MGP_CBAJ_G0030623.1 mouse_genomes_project 6 92551330 92553799 - MGP_CBAJ_P0078080 Egr4 protein_coding protein_coding MGP_CBAJ_T0076370.1 MGP_CBAJ_G0030217.1 mouse_genomes_project 6 30486665 30526608 - MGP_CBAJ_P0076370 Cep41 protein_coding protein_coding MGP_CBAJ_T0076371.1 MGP_CBAJ_G0030217.1 mouse_genomes_project 6 30486667 30526552 - MGP_CBAJ_P0076371 Cep41 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076372.1 MGP_CBAJ_G0030217.1 mouse_genomes_project 6 30487586 30526554 - MGP_CBAJ_P0076372 Cep41 protein_coding protein_coding MGP_CBAJ_T0076373.1 MGP_CBAJ_G0030217.1 mouse_genomes_project 6 30487587 30502425 - Cep41 protein_coding processed_transcript MGP_CBAJ_T0076374.1 MGP_CBAJ_G0030217.1 mouse_genomes_project 6 30488740 30490018 - Cep41 protein_coding retained_intron MGP_CBAJ_T0076375.1 MGP_CBAJ_G0030217.1 mouse_genomes_project 6 30491590 30494439 - Cep41 protein_coding retained_intron MGP_CBAJ_T0076376.1 MGP_CBAJ_G0030217.1 mouse_genomes_project 6 30494051 30525947 - MGP_CBAJ_P0076376 Cep41 protein_coding protein_coding MGP_CBAJ_T0076377.1 MGP_CBAJ_G0030217.1 mouse_genomes_project 6 30499097 30526535 - MGP_CBAJ_P0076377 Cep41 protein_coding protein_coding MGP_CBAJ_T0076378.1 MGP_CBAJ_G0030217.1 mouse_genomes_project 6 30499383 30513591 - MGP_CBAJ_P0076378 Cep41 protein_coding protein_coding MGP_CBAJ_T0076379.1 MGP_CBAJ_G0030217.1 mouse_genomes_project 6 30512145 30526559 - MGP_CBAJ_P0076379 Cep41 protein_coding protein_coding MGP_CBAJ_T0077386.1 MGP_CBAJ_G0030478.1 mouse_genomes_project 6 61555444 61556496 - MGP_CBAJ_P0077386 protein_coding protein_coding MGP_CBAJ_T0008425.1 MGP_CBAJ_G0006813.1 mouse_genomes_project 6 30073319 30107452 + 1700095J07Rik lincRNA lincRNA MGP_CBAJ_T0008426.1 MGP_CBAJ_G0006813.1 mouse_genomes_project 6 30073335 30076483 + 1700095J07Rik lincRNA lincRNA MGP_CBAJ_T0076664.1 MGP_CBAJ_G0030271.1 mouse_genomes_project 6 40228994 40270040 - MGP_CBAJ_P0076664 Mkrn1 protein_coding protein_coding MGP_CBAJ_T0076665.1 MGP_CBAJ_G0030271.1 mouse_genomes_project 6 40230332 40248763 - MGP_CBAJ_P0076665 Mkrn1 protein_coding protein_coding MGP_CBAJ_T0076666.1 MGP_CBAJ_G0030271.1 mouse_genomes_project 6 40231943 40269701 - MGP_CBAJ_P0076666 Mkrn1 protein_coding protein_coding MGP_CBAJ_T0076667.1 MGP_CBAJ_G0030271.1 mouse_genomes_project 6 40231949 40269992 - MGP_CBAJ_P0076667 Mkrn1 protein_coding protein_coding MGP_CBAJ_T0076668.1 MGP_CBAJ_G0030271.1 mouse_genomes_project 6 40232464 40249114 - Mkrn1 protein_coding retained_intron MGP_CBAJ_T0076669.1 MGP_CBAJ_G0030271.1 mouse_genomes_project 6 40248843 40269391 - MGP_CBAJ_P0076669 Mkrn1 protein_coding protein_coding MGP_CBAJ_T0076670.1 MGP_CBAJ_G0030271.1 mouse_genomes_project 6 40249571 40269932 - MGP_CBAJ_P0076670 Mkrn1 protein_coding protein_coding MGP_CBAJ_T0001975.1 MGP_CBAJ_G0001891.1 mouse_genomes_project 6 78196026 78199436 - TEC TEC MGP_CBAJ_T0077490.1 MGP_CBAJ_G0030503.1 mouse_genomes_project 6 70960350 70961498 - MGP_CBAJ_P0077490 Vmn1r33 protein_coding protein_coding MGP_CBAJ_T0010619.1 MGP_CBAJ_G0008757.1 mouse_genomes_project 6 485798 485883 - Mir653 miRNA miRNA MGP_CBAJ_T0077749.1 MGP_CBAJ_G0030559.1 mouse_genomes_project 6 84515480 84517722 + MGP_CBAJ_P0077749 Reg3b protein_coding protein_coding MGP_CBAJ_T0077750.1 MGP_CBAJ_G0030559.1 mouse_genomes_project 6 84515684 84518290 + MGP_CBAJ_P0077750 Reg3b protein_coding protein_coding MGP_CBAJ_T0077751.1 MGP_CBAJ_G0030559.1 mouse_genomes_project 6 84515721 84517732 + MGP_CBAJ_P0077751 Reg3b protein_coding protein_coding MGP_CBAJ_T0077752.1 MGP_CBAJ_G0030559.1 mouse_genomes_project 6 84517354 84518242 + Reg3b protein_coding retained_intron MGP_CBAJ_T0101154.1 MGP_CBAJ_G0039339.1 mouse_genomes_project 6 34596827 34627380 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101155.1 MGP_CBAJ_G0039339.1 mouse_genomes_project 6 34596988 34625523 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101156.1 MGP_CBAJ_G0039339.1 mouse_genomes_project 6 34625491 34625664 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101157.1 MGP_CBAJ_G0039339.1 mouse_genomes_project 6 34625931 34627381 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0076594.1 MGP_CBAJ_G0030257.1 mouse_genomes_project 6 38935759 38947821 - MGP_CBAJ_P0076594 Zc3hav1l protein_coding protein_coding MGP_CBAJ_T0004936.1 MGP_CBAJ_G0004216.1 mouse_genomes_project 6 94936313 94943615 + Gm44097 antisense antisense MGP_CBAJ_T0077387.1 MGP_CBAJ_G0030479.1 mouse_genomes_project 6 61555542 61556449 - MGP_CBAJ_P0077387 protein_coding protein_coding MGP_CBAJ_T0078441.1 MGP_CBAJ_G0030695.1 mouse_genomes_project 6 97573163 97584768 + MGP_CBAJ_P0078441 protein_coding protein_coding MGP_CBAJ_T0005050.1 MGP_CBAJ_G0004305.1 mouse_genomes_project 6 163571880 163575201 + Gm44020 antisense antisense MGP_CBAJ_T0008531.1 MGP_CBAJ_G0006889.1 mouse_genomes_project 6 79231612 79251758 - Gm31747 lincRNA lincRNA MGP_CBAJ_T0005020.1 MGP_CBAJ_G0004279.1 mouse_genomes_project 6 147638889 147744569 - Gm44293 antisense antisense MGP_CBAJ_T0015431.1 MGP_CBAJ_G0013543.1 mouse_genomes_project 6 155216751 155216957 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011508.1 MGP_CBAJ_G0009646.1 mouse_genomes_project 6 30575079 30575178 + Gm27568 misc_RNA misc_RNA MGP_CBAJ_T0011542.1 MGP_CBAJ_G0009680.1 mouse_genomes_project 6 134059272 134059384 + Gm26168 misc_RNA misc_RNA MGP_CBAJ_T0079962.1 MGP_CBAJ_G0030990.1 mouse_genomes_project 6 140706046 140716484 - Fkbp4 protein_coding retained_intron MGP_CBAJ_T0079963.1 MGP_CBAJ_G0030990.1 mouse_genomes_project 6 140706391 140716484 - MGP_CBAJ_P0079963 Fkbp4 protein_coding protein_coding MGP_CBAJ_T0079964.1 MGP_CBAJ_G0030990.1 mouse_genomes_project 6 140711021 140715947 - MGP_CBAJ_P0079964 Fkbp4 protein_coding protein_coding MGP_CBAJ_T0079965.1 MGP_CBAJ_G0030990.1 mouse_genomes_project 6 140711568 140715460 - MGP_CBAJ_P0079965 Fkbp4 protein_coding protein_coding MGP_CBAJ_T0001973.1 MGP_CBAJ_G0001889.1 mouse_genomes_project 6 77956605 77958166 + TEC TEC MGP_CBAJ_T0015337.1 MGP_CBAJ_G0013449.1 mouse_genomes_project 6 127584214 127584623 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004845.1 MGP_CBAJ_G0004156.1 mouse_genomes_project 6 34304471 34326796 + Gm13856 antisense antisense MGP_CBAJ_T0075977.1 MGP_CBAJ_G0030143.1 mouse_genomes_project 6 15497822 15538462 + MGP_CBAJ_P0075977 Cav1 protein_coding protein_coding MGP_CBAJ_T0075978.1 MGP_CBAJ_G0030143.1 mouse_genomes_project 6 15497832 15537567 + MGP_CBAJ_P0075978 Cav1 protein_coding protein_coding MGP_CBAJ_T0075979.1 MGP_CBAJ_G0030143.1 mouse_genomes_project 6 15497897 15536434 + MGP_CBAJ_P0075979 Cav1 protein_coding protein_coding MGP_CBAJ_T0075980.1 MGP_CBAJ_G0030143.1 mouse_genomes_project 6 15497898 15520323 + Cav1 protein_coding processed_transcript MGP_CBAJ_T0075981.1 MGP_CBAJ_G0030143.1 mouse_genomes_project 6 15497898 15536489 + MGP_CBAJ_P0075981 Cav1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075982.1 MGP_CBAJ_G0030143.1 mouse_genomes_project 6 15497910 15499671 + MGP_CBAJ_P0075982 Cav1 protein_coding protein_coding MGP_CBAJ_T0075983.1 MGP_CBAJ_G0030143.1 mouse_genomes_project 6 15498515 15536291 + MGP_CBAJ_P0075983 Cav1 protein_coding protein_coding MGP_CBAJ_T0075984.1 MGP_CBAJ_G0030143.1 mouse_genomes_project 6 15498745 15536657 + MGP_CBAJ_P0075984 Cav1 protein_coding protein_coding MGP_CBAJ_T0075985.1 MGP_CBAJ_G0030143.1 mouse_genomes_project 6 15499107 15538590 + MGP_CBAJ_P0075985 Cav1 protein_coding protein_coding MGP_CBAJ_T0075986.1 MGP_CBAJ_G0030143.1 mouse_genomes_project 6 15499190 15520314 + Cav1 protein_coding processed_transcript MGP_CBAJ_T0015206.1 MGP_CBAJ_G0013318.1 mouse_genomes_project 6 73625349 73625801 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011517.1 MGP_CBAJ_G0009655.1 mouse_genomes_project 6 54824483 54824579 + Gm28032 misc_RNA misc_RNA MGP_CBAJ_T0001898.1 MGP_CBAJ_G0001814.1 mouse_genomes_project 6 27684895 27688693 - TEC TEC MGP_CBAJ_T0076964.1 MGP_CBAJ_G0030364.1 mouse_genomes_project 6 50610867 50617615 + MGP_CBAJ_P0076964 Atp6v0e2 protein_coding protein_coding MGP_CBAJ_T0076965.1 MGP_CBAJ_G0030364.1 mouse_genomes_project 6 50610890 50615680 + Atp6v0e2 protein_coding retained_intron MGP_CBAJ_T0076966.1 MGP_CBAJ_G0030364.1 mouse_genomes_project 6 50610917 50617615 + MGP_CBAJ_P0076966 Atp6v0e2 protein_coding protein_coding MGP_CBAJ_T0078382.1 MGP_CBAJ_G0030679.1 mouse_genomes_project 6 96257827 96273157 - MGP_CBAJ_P0078382 Mcm2 protein_coding protein_coding MGP_CBAJ_T0078383.1 MGP_CBAJ_G0030679.1 mouse_genomes_project 6 96262774 96266268 - Mcm2 protein_coding retained_intron MGP_CBAJ_T0078384.1 MGP_CBAJ_G0030679.1 mouse_genomes_project 6 96264234 96267538 - MGP_CBAJ_P0078384 Mcm2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078385.1 MGP_CBAJ_G0030679.1 mouse_genomes_project 6 96267394 96273078 - Mcm2 protein_coding processed_transcript MGP_CBAJ_T0078386.1 MGP_CBAJ_G0030679.1 mouse_genomes_project 6 96267505 96273065 - MGP_CBAJ_P0078386 Mcm2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078387.1 MGP_CBAJ_G0030679.1 mouse_genomes_project 6 96267521 96268080 - Mcm2 protein_coding retained_intron MGP_CBAJ_T0078388.1 MGP_CBAJ_G0030679.1 mouse_genomes_project 6 96271324 96273054 - Mcm2 protein_coding retained_intron MGP_CBAJ_T0015034.1 MGP_CBAJ_G0013146.1 mouse_genomes_project 6 11912760 11913065 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018051.1 MGP_CBAJ_G0015389.1 mouse_genomes_project 6 136783326 136798343 + Gm44597 processed_transcript retained_intron MGP_CBAJ_T0018052.1 MGP_CBAJ_G0015389.1 mouse_genomes_project 6 136783355 136798298 + Gm44597 processed_transcript retained_intron MGP_CBAJ_T0015363.1 MGP_CBAJ_G0013475.1 mouse_genomes_project 6 135531437 135532287 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010652.1 MGP_CBAJ_G0008790.1 mouse_genomes_project 6 80259407 80259517 - Gm22254 miRNA miRNA MGP_CBAJ_T0001982.1 MGP_CBAJ_G0001898.1 mouse_genomes_project 6 83383631 83384464 - TEC TEC MGP_CBAJ_T0002037.1 MGP_CBAJ_G0001953.1 mouse_genomes_project 6 96294159 96297089 + TEC TEC MGP_CBAJ_T0004998.1 MGP_CBAJ_G0004261.1 mouse_genomes_project 6 136452664 136461093 + Gm20531 antisense antisense MGP_CBAJ_T0015327.1 MGP_CBAJ_G0013439.1 mouse_genomes_project 6 125077227 125081635 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0076355.1 MGP_CBAJ_G0030213.1 mouse_genomes_project 6 30350325 30377858 + MGP_CBAJ_P0076355 Cpa2 protein_coding protein_coding MGP_CBAJ_T0076356.1 MGP_CBAJ_G0030213.1 mouse_genomes_project 6 30350385 30353216 + Cpa2 protein_coding retained_intron MGP_CBAJ_T0076357.1 MGP_CBAJ_G0030213.1 mouse_genomes_project 6 30350413 30355854 + Cpa2 protein_coding processed_transcript MGP_CBAJ_T0076358.1 MGP_CBAJ_G0030213.1 mouse_genomes_project 6 30351951 30353736 + Cpa2 protein_coding retained_intron MGP_CBAJ_T0076359.1 MGP_CBAJ_G0030213.1 mouse_genomes_project 6 30352659 30362457 + Cpa2 protein_coding retained_intron MGP_CBAJ_T0076360.1 MGP_CBAJ_G0030213.1 mouse_genomes_project 6 30353228 30359686 + Cpa2 protein_coding retained_intron MGP_CBAJ_T0076361.1 MGP_CBAJ_G0030213.1 mouse_genomes_project 6 30355385 30355899 + Cpa2 protein_coding processed_transcript MGP_CBAJ_T0076362.1 MGP_CBAJ_G0030213.1 mouse_genomes_project 6 30362303 30377630 + Cpa2 protein_coding retained_intron MGP_CBAJ_T0015354.1 MGP_CBAJ_G0013466.1 mouse_genomes_project 6 133693086 133693325 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015390.1 MGP_CBAJ_G0013502.1 mouse_genomes_project 6 142103416 142103858 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004925.1 MGP_CBAJ_G0004213.1 mouse_genomes_project 6 93686266 93696759 - A430078I02Rik antisense antisense MGP_CBAJ_T0004926.1 MGP_CBAJ_G0004213.1 mouse_genomes_project 6 93686799 93696819 - A430078I02Rik antisense antisense MGP_CBAJ_T0015149.1 MGP_CBAJ_G0013261.1 mouse_genomes_project 6 64547845 64548370 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002025.1 MGP_CBAJ_G0001941.1 mouse_genomes_project 6 95105908 95106773 - TEC TEC MGP_CBAJ_T0080047.1 MGP_CBAJ_G0031016.1 mouse_genomes_project 6 142174009 142189828 - MGP_CBAJ_P0080047 Klrk1 protein_coding protein_coding MGP_CBAJ_T0080048.1 MGP_CBAJ_G0031016.1 mouse_genomes_project 6 142176097 142188734 - MGP_CBAJ_P0080048 Klrk1 protein_coding protein_coding MGP_CBAJ_T0080049.1 MGP_CBAJ_G0031016.1 mouse_genomes_project 6 142176143 142189805 - MGP_CBAJ_P0080049 Klrk1 protein_coding protein_coding MGP_CBAJ_T0080050.1 MGP_CBAJ_G0031016.1 mouse_genomes_project 6 142180176 142188543 - Klrk1 protein_coding retained_intron MGP_CBAJ_T0080051.1 MGP_CBAJ_G0031016.1 mouse_genomes_project 6 142180251 142188646 - Klrk1 protein_coding retained_intron MGP_CBAJ_T0080052.1 MGP_CBAJ_G0031016.1 mouse_genomes_project 6 142186563 142189824 - Klrk1 protein_coding retained_intron MGP_CBAJ_T0015311.1 MGP_CBAJ_G0013423.1 mouse_genomes_project 6 119130140 119130765 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099469.1 MGP_CBAJ_G0037724.1 mouse_genomes_project 6 164358300 164358407 - Gm22578 snRNA snRNA MGP_CBAJ_T0080071.1 MGP_CBAJ_G0031025.1 mouse_genomes_project 6 142992170 143008877 - MGP_CBAJ_P0080071 protein_coding protein_coding MGP_CBAJ_T0080074.1 MGP_CBAJ_G0031025.1 mouse_genomes_project 6 142992248 143008877 - MGP_CBAJ_P0080074 protein_coding protein_coding MGP_CBAJ_T0002020.1 MGP_CBAJ_G0001936.1 mouse_genomes_project 6 94530245 94533608 - TEC TEC MGP_CBAJ_T0078174.1 MGP_CBAJ_G0030639.1 mouse_genomes_project 6 93637603 93659023 + MGP_CBAJ_P0078174 Gm44790 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076729.1 MGP_CBAJ_G0030288.1 mouse_genomes_project 6 41606388 41617191 - MGP_CBAJ_P0076729 Clec5a protein_coding protein_coding MGP_CBAJ_T0076730.1 MGP_CBAJ_G0030288.1 mouse_genomes_project 6 41608211 41617209 - Clec5a protein_coding processed_transcript MGP_CBAJ_T0076731.1 MGP_CBAJ_G0030288.1 mouse_genomes_project 6 41609344 41617183 - MGP_CBAJ_P0076731 Clec5a protein_coding protein_coding MGP_CBAJ_T0076732.1 MGP_CBAJ_G0030288.1 mouse_genomes_project 6 41609454 41617178 - MGP_CBAJ_P0076732 Clec5a protein_coding protein_coding MGP_CBAJ_T0008678.1 MGP_CBAJ_G0006999.1 mouse_genomes_project 6 162873560 162880456 - Gm15762 lincRNA lincRNA MGP_CBAJ_T0010623.1 MGP_CBAJ_G0008761.1 mouse_genomes_project 6 18018935 18019055 + Mir6370 miRNA miRNA MGP_CBAJ_T0011548.1 MGP_CBAJ_G0009686.1 mouse_genomes_project 6 156781121 156781410 - Gm25430 misc_RNA misc_RNA MGP_CBAJ_T0100691.1 MGP_CBAJ_G0038946.1 mouse_genomes_project 6 105806239 105806369 - Gm25852 snoRNA snoRNA MGP_CBAJ_T0076081.1 MGP_CBAJ_G0030159.1 mouse_genomes_project 6 21742525 21944793 + MGP_CBAJ_P0076081 Ptprz1 protein_coding protein_coding MGP_CBAJ_T0076082.1 MGP_CBAJ_G0030159.1 mouse_genomes_project 6 21742720 21892609 + MGP_CBAJ_P0076082 Ptprz1 protein_coding protein_coding MGP_CBAJ_T0076083.1 MGP_CBAJ_G0030159.1 mouse_genomes_project 6 21742775 21944494 + MGP_CBAJ_P0076083 Ptprz1 protein_coding protein_coding MGP_CBAJ_T0076084.1 MGP_CBAJ_G0030159.1 mouse_genomes_project 6 21859424 21859859 + Ptprz1 protein_coding retained_intron MGP_CBAJ_T0076085.1 MGP_CBAJ_G0030159.1 mouse_genomes_project 6 21874360 21887328 + Ptprz1 protein_coding retained_intron MGP_CBAJ_T0076086.1 MGP_CBAJ_G0030159.1 mouse_genomes_project 6 21940155 21943391 + Ptprz1 protein_coding retained_intron MGP_CBAJ_T0008614.1 MGP_CBAJ_G0006953.1 mouse_genomes_project 6 130865307 130871775 - 4930540M05Rik lincRNA lincRNA MGP_CBAJ_T0076248.1 MGP_CBAJ_G0030199.1 mouse_genomes_project 6 29110153 29112180 + MGP_CBAJ_P0076248 Gm9047 protein_coding protein_coding MGP_CBAJ_T0002121.1 MGP_CBAJ_G0002036.1 mouse_genomes_project 6 147569241 147569937 - TEC TEC MGP_CBAJ_T0079709.1 MGP_CBAJ_G0030941.1 mouse_genomes_project 6 136699818 136706951 - MGP_CBAJ_P0079709 Cops7a protein_coding protein_coding MGP_CBAJ_T0079710.1 MGP_CBAJ_G0030941.1 mouse_genomes_project 6 136700221 136706861 - MGP_CBAJ_P0079710 Cops7a protein_coding protein_coding MGP_CBAJ_T0079711.1 MGP_CBAJ_G0030941.1 mouse_genomes_project 6 136700639 136701547 - Cops7a protein_coding retained_intron MGP_CBAJ_T0079712.1 MGP_CBAJ_G0030941.1 mouse_genomes_project 6 136701312 136706703 - MGP_CBAJ_P0079712 Cops7a protein_coding protein_coding MGP_CBAJ_T0079713.1 MGP_CBAJ_G0030941.1 mouse_genomes_project 6 136702563 136706821 - MGP_CBAJ_P0079713 Cops7a protein_coding protein_coding MGP_CBAJ_T0079714.1 MGP_CBAJ_G0030941.1 mouse_genomes_project 6 136704028 136706620 - MGP_CBAJ_P0079714 Cops7a protein_coding protein_coding MGP_CBAJ_T0079715.1 MGP_CBAJ_G0030941.1 mouse_genomes_project 6 136705966 136706925 - Cops7a protein_coding retained_intron MGP_CBAJ_T0100679.1 MGP_CBAJ_G0038934.1 mouse_genomes_project 6 76055810 76055946 + Gm23346 snoRNA snoRNA MGP_CBAJ_T0075930.1 MGP_CBAJ_G0030135.1 mouse_genomes_project 6 11618915 11624361 - MGP_CBAJ_P0075930 Gpr85 protein_coding protein_coding MGP_CBAJ_T0075931.1 MGP_CBAJ_G0030135.1 mouse_genomes_project 6 11619525 11622892 - MGP_CBAJ_P0075931 Gpr85 protein_coding protein_coding MGP_CBAJ_T0075932.1 MGP_CBAJ_G0030135.1 mouse_genomes_project 6 11619534 11621699 - MGP_CBAJ_P0075932 Gpr85 protein_coding protein_coding MGP_CBAJ_T0075933.1 MGP_CBAJ_G0030135.1 mouse_genomes_project 6 11622531 11623914 - Gpr85 protein_coding processed_transcript MGP_CBAJ_T0102007.1 MGP_CBAJ_G0040038.1 mouse_genomes_project 6 75573829 75573977 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0005006.1 MGP_CBAJ_G0004268.1 mouse_genomes_project 6 139168095 139170856 + Gm43126 antisense antisense MGP_CBAJ_T0077736.1 MGP_CBAJ_G0030557.1 mouse_genomes_project 6 82890587 84100646 - MGP_CBAJ_P0077736 Ctnna2 protein_coding protein_coding MGP_CBAJ_T0077737.1 MGP_CBAJ_G0030557.1 mouse_genomes_project 6 82890587 84100646 - MGP_CBAJ_P0077737 Ctnna2 protein_coding protein_coding MGP_CBAJ_T0077738.1 MGP_CBAJ_G0030557.1 mouse_genomes_project 6 82890590 84100497 - MGP_CBAJ_P0077738 Ctnna2 protein_coding protein_coding MGP_CBAJ_T0077739.1 MGP_CBAJ_G0030557.1 mouse_genomes_project 6 82891500 84100507 - MGP_CBAJ_P0077739 Ctnna2 protein_coding protein_coding MGP_CBAJ_T0077740.1 MGP_CBAJ_G0030557.1 mouse_genomes_project 6 82891706 82914863 - Ctnna2 protein_coding retained_intron MGP_CBAJ_T0077741.1 MGP_CBAJ_G0030557.1 mouse_genomes_project 6 82929319 83182808 - MGP_CBAJ_P0077741 Ctnna2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077746.1 MGP_CBAJ_G0030557.1 mouse_genomes_project 6 83694059 84100507 - MGP_CBAJ_P0077746 Ctnna2 protein_coding protein_coding MGP_CBAJ_T0077747.1 MGP_CBAJ_G0030557.1 mouse_genomes_project 6 83699649 84029980 - MGP_CBAJ_P0077747 Ctnna2 protein_coding unknown_likely_coding MGP_CBAJ_T0077748.1 MGP_CBAJ_G0030557.1 mouse_genomes_project 6 84042043 84100532 - Ctnna2 protein_coding processed_transcript MGP_CBAJ_T0099422.1 MGP_CBAJ_G0037677.1 mouse_genomes_project 6 33126115 33126219 - Gm22321 snRNA snRNA MGP_CBAJ_T0002026.1 MGP_CBAJ_G0001942.1 mouse_genomes_project 6 95136988 95139581 - TEC TEC MGP_CBAJ_T0002523.1 MGP_CBAJ_G0002427.1 mouse_genomes_project 6 42759265 42759316 + MGP_CBAJ_P0002523 Trbj1-4 TR_J_gene TR_J_gene MGP_CBAJ_T0004831.1 MGP_CBAJ_G0004144.1 mouse_genomes_project 6 16751782 16754984 + Gm15594 antisense antisense MGP_CBAJ_T0015166.1 MGP_CBAJ_G0013278.1 mouse_genomes_project 6 69383735 69384086 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099459.1 MGP_CBAJ_G0037714.1 mouse_genomes_project 6 136464272 136464334 - Rnu7 snRNA snRNA MGP_CBAJ_T0001961.1 MGP_CBAJ_G0001877.1 mouse_genomes_project 6 64454325 64458353 - TEC TEC MGP_CBAJ_T0076743.1 MGP_CBAJ_G0030293.1 mouse_genomes_project 6 42013762 42033710 - MGP_CBAJ_P0076743 1700074P13Rik protein_coding protein_coding MGP_CBAJ_T0076744.1 MGP_CBAJ_G0030293.1 mouse_genomes_project 6 42013785 42033770 - MGP_CBAJ_P0076744 1700074P13Rik protein_coding protein_coding MGP_CBAJ_T0076745.1 MGP_CBAJ_G0030293.1 mouse_genomes_project 6 42015051 42022951 - MGP_CBAJ_P0076745 1700074P13Rik protein_coding protein_coding MGP_CBAJ_T0017994.1 MGP_CBAJ_G0015369.1 mouse_genomes_project 6 50838335 50840610 - Gimap1os processed_transcript antisense MGP_CBAJ_T0017995.1 MGP_CBAJ_G0015369.1 mouse_genomes_project 6 50839489 50841433 - Gimap1os processed_transcript retained_intron MGP_CBAJ_T0077958.1 MGP_CBAJ_G0030603.1 mouse_genomes_project 6 90510126 90537052 + MGP_CBAJ_P0077958 Vax2 protein_coding protein_coding MGP_CBAJ_T0077076.1 MGP_CBAJ_G0030393.1 mouse_genomes_project 6 51589617 51596370 + MGP_CBAJ_P0077076 Fam221a protein_coding protein_coding MGP_CBAJ_T0077077.1 MGP_CBAJ_G0030393.1 mouse_genomes_project 6 51589630 51611879 + MGP_CBAJ_P0077077 Fam221a protein_coding protein_coding MGP_CBAJ_T0077078.1 MGP_CBAJ_G0030393.1 mouse_genomes_project 6 51599005 51605389 + Fam221a protein_coding processed_transcript MGP_CBAJ_T0077079.1 MGP_CBAJ_G0030393.1 mouse_genomes_project 6 51605185 51612267 + Fam221a protein_coding retained_intron MGP_CBAJ_T0077080.1 MGP_CBAJ_G0030393.1 mouse_genomes_project 6 51610468 51612212 + Fam221a protein_coding retained_intron MGP_CBAJ_T0101992.1 MGP_CBAJ_G0040023.1 mouse_genomes_project 6 61333936 61334849 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0001960.1 MGP_CBAJ_G0001876.1 mouse_genomes_project 6 62394293 62396397 + TEC TEC MGP_CBAJ_T0002667.1 MGP_CBAJ_G0002547.1 mouse_genomes_project 6 42205460 42205720 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0080672.1 MGP_CBAJ_G0031168.1 mouse_genomes_project 6 164035558 164054831 - Ipo8 protein_coding retained_intron MGP_CBAJ_T0080673.1 MGP_CBAJ_G0031168.1 mouse_genomes_project 6 164035558 164100787 - MGP_CBAJ_P0080673 Ipo8 protein_coding protein_coding MGP_CBAJ_T0080674.1 MGP_CBAJ_G0031168.1 mouse_genomes_project 6 164035568 164040484 - Ipo8 protein_coding retained_intron MGP_CBAJ_T0080675.1 MGP_CBAJ_G0031168.1 mouse_genomes_project 6 164041162 164043567 - Ipo8 protein_coding retained_intron MGP_CBAJ_T0080676.1 MGP_CBAJ_G0031168.1 mouse_genomes_project 6 164041771 164047494 - Ipo8 protein_coding retained_intron MGP_CBAJ_T0080677.1 MGP_CBAJ_G0031168.1 mouse_genomes_project 6 164049425 164063390 - Ipo8 protein_coding retained_intron MGP_CBAJ_T0080678.1 MGP_CBAJ_G0031168.1 mouse_genomes_project 6 164055784 164089138 - Ipo8 protein_coding retained_intron MGP_CBAJ_T0080679.1 MGP_CBAJ_G0031168.1 mouse_genomes_project 6 164066501 164082444 - Ipo8 protein_coding processed_transcript MGP_CBAJ_T0080680.1 MGP_CBAJ_G0031168.1 mouse_genomes_project 6 164066502 164100784 - MGP_CBAJ_P0080680 Ipo8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080681.1 MGP_CBAJ_G0031168.1 mouse_genomes_project 6 164066504 164100746 - MGP_CBAJ_P0080681 Ipo8 protein_coding protein_coding MGP_CBAJ_T0080682.1 MGP_CBAJ_G0031168.1 mouse_genomes_project 6 164083974 164086881 - Ipo8 protein_coding retained_intron MGP_CBAJ_T0008510.1 MGP_CBAJ_G0006870.1 mouse_genomes_project 6 59618802 59709923 - Gm8239 lincRNA lincRNA MGP_CBAJ_T0079859.1 MGP_CBAJ_G0030968.1 mouse_genomes_project 6 138826907 138856735 - MGP_CBAJ_P0079859 Ndufa9 protein_coding protein_coding MGP_CBAJ_T0079860.1 MGP_CBAJ_G0030968.1 mouse_genomes_project 6 138827182 138856735 - MGP_CBAJ_P0079860 Ndufa9 protein_coding protein_coding MGP_CBAJ_T0079861.1 MGP_CBAJ_G0030968.1 mouse_genomes_project 6 138849069 138856746 - Ndufa9 protein_coding retained_intron MGP_CBAJ_T0008687.1 MGP_CBAJ_G0007007.1 mouse_genomes_project 6 164950929 164951802 + Gm21814 lincRNA lincRNA MGP_CBAJ_T0008688.1 MGP_CBAJ_G0007007.1 mouse_genomes_project 6 164950971 164978110 + Gm21814 lincRNA lincRNA MGP_CBAJ_T0008689.1 MGP_CBAJ_G0007007.1 mouse_genomes_project 6 164976630 164978275 + Gm21814 lincRNA lincRNA MGP_CBAJ_T0079826.1 MGP_CBAJ_G0030960.1 mouse_genomes_project 6 137158157 137176348 - MGP_CBAJ_P0079826 Plekhg6 protein_coding protein_coding MGP_CBAJ_T0000273.1 MGP_CBAJ_G0000218.1 mouse_genomes_project 6 72981612 72982407 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0077930.1 MGP_CBAJ_G0030597.1 mouse_genomes_project 6 90098191 90176733 - MGP_CBAJ_P0077930 Tet3 protein_coding protein_coding MGP_CBAJ_T0077931.1 MGP_CBAJ_G0030597.1 mouse_genomes_project 6 90098191 90191553 - MGP_CBAJ_P0077931 Tet3 protein_coding protein_coding MGP_CBAJ_T0077932.1 MGP_CBAJ_G0030597.1 mouse_genomes_project 6 90131053 90176842 - Tet3 protein_coding processed_transcript MGP_CBAJ_T0077933.1 MGP_CBAJ_G0030597.1 mouse_genomes_project 6 90136913 90194245 - MGP_CBAJ_P0077933 Tet3 protein_coding protein_coding MGP_CBAJ_T0077934.1 MGP_CBAJ_G0030597.1 mouse_genomes_project 6 90171960 90176796 - Tet3 protein_coding retained_intron MGP_CBAJ_T0015191.1 MGP_CBAJ_G0013303.1 mouse_genomes_project 6 71842623 71842960 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015417.1 MGP_CBAJ_G0013529.1 mouse_genomes_project 6 148240299 148240708 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002622.1 MGP_CBAJ_G0002509.1 mouse_genomes_project 6 42240746 42241218 + MGP_CBAJ_P0002622 Trbv14 TR_V_gene TR_V_gene MGP_CBAJ_T0075833.1 MGP_CBAJ_G0030114.1 mouse_genomes_project 6 4013142 4017138 + MGP_CBAJ_P0075833 Dlx6 protein_coding protein_coding MGP_CBAJ_T0075834.1 MGP_CBAJ_G0030114.1 mouse_genomes_project 6 4013142 4017914 + MGP_CBAJ_P0075834 Dlx6 protein_coding protein_coding MGP_CBAJ_T0075835.1 MGP_CBAJ_G0030114.1 mouse_genomes_project 6 4013530 4017138 + MGP_CBAJ_P0075835 Dlx6 protein_coding protein_coding MGP_CBAJ_T0075836.1 MGP_CBAJ_G0030114.1 mouse_genomes_project 6 4013606 4015239 + Dlx6 protein_coding retained_intron MGP_CBAJ_T0077824.1 MGP_CBAJ_G0030578.1 mouse_genomes_project 6 89749843 89753131 + MGP_CBAJ_P0077824 Aup1 protein_coding protein_coding MGP_CBAJ_T0077825.1 MGP_CBAJ_G0030578.1 mouse_genomes_project 6 89749968 89753009 + Aup1 protein_coding retained_intron MGP_CBAJ_T0077826.1 MGP_CBAJ_G0030578.1 mouse_genomes_project 6 89750036 89751708 + Aup1 protein_coding retained_intron MGP_CBAJ_T0077827.1 MGP_CBAJ_G0030578.1 mouse_genomes_project 6 89750051 89751678 + Aup1 protein_coding retained_intron MGP_CBAJ_T0077828.1 MGP_CBAJ_G0030578.1 mouse_genomes_project 6 89750053 89750492 + Aup1 protein_coding retained_intron MGP_CBAJ_T0077829.1 MGP_CBAJ_G0030578.1 mouse_genomes_project 6 89750053 89753001 + MGP_CBAJ_P0077829 Aup1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077830.1 MGP_CBAJ_G0030578.1 mouse_genomes_project 6 89750058 89751757 + MGP_CBAJ_P0077830 Aup1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077831.1 MGP_CBAJ_G0030578.1 mouse_genomes_project 6 89750060 89750838 + Aup1 protein_coding retained_intron MGP_CBAJ_T0077832.1 MGP_CBAJ_G0030578.1 mouse_genomes_project 6 89750070 89753005 + MGP_CBAJ_P0077832 Aup1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077833.1 MGP_CBAJ_G0030578.1 mouse_genomes_project 6 89750077 89751611 + Aup1 protein_coding retained_intron MGP_CBAJ_T0077834.1 MGP_CBAJ_G0030578.1 mouse_genomes_project 6 89750713 89751440 + Aup1 protein_coding retained_intron MGP_CBAJ_T0077835.1 MGP_CBAJ_G0030578.1 mouse_genomes_project 6 89751036 89751636 + Aup1 protein_coding retained_intron MGP_CBAJ_T0077836.1 MGP_CBAJ_G0030578.1 mouse_genomes_project 6 89751732 89752967 + Aup1 protein_coding retained_intron MGP_CBAJ_T0077837.1 MGP_CBAJ_G0030578.1 mouse_genomes_project 6 89751834 89752160 + Aup1 protein_coding retained_intron MGP_CBAJ_T0077838.1 MGP_CBAJ_G0030578.1 mouse_genomes_project 6 89752170 89752716 + Aup1 protein_coding retained_intron MGP_CBAJ_T0077839.1 MGP_CBAJ_G0030578.1 mouse_genomes_project 6 89752175 89753005 + Aup1 protein_coding retained_intron MGP_CBAJ_T0077840.1 MGP_CBAJ_G0030578.1 mouse_genomes_project 6 89752543 89752999 + Aup1 protein_coding retained_intron MGP_CBAJ_T0002669.1 MGP_CBAJ_G0002549.1 mouse_genomes_project 6 42298771 42299065 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0076993.1 MGP_CBAJ_G0030372.1 mouse_genomes_project 6 50717150 50724108 + MGP_CBAJ_P0076993 AI854703 protein_coding protein_coding MGP_CBAJ_T0076994.1 MGP_CBAJ_G0030372.1 mouse_genomes_project 6 50717606 50719847 + MGP_CBAJ_P0076994 AI854703 protein_coding protein_coding MGP_CBAJ_T0076995.1 MGP_CBAJ_G0030372.1 mouse_genomes_project 6 50717664 50719847 + MGP_CBAJ_P0076995 AI854703 protein_coding protein_coding MGP_CBAJ_T0076996.1 MGP_CBAJ_G0030372.1 mouse_genomes_project 6 50718318 50724112 + MGP_CBAJ_P0076996 AI854703 protein_coding protein_coding MGP_CBAJ_T0015389.1 MGP_CBAJ_G0013501.1 mouse_genomes_project 6 141447278 141448386 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0076734.1 MGP_CBAJ_G0030290.1 mouse_genomes_project 6 41664755 41699825 + MGP_CBAJ_P0076734 Mgam protein_coding protein_coding MGP_CBAJ_T0076735.1 MGP_CBAJ_G0030290.1 mouse_genomes_project 6 41664755 41843766 + MGP_CBAJ_P0076735 Mgam protein_coding protein_coding MGP_CBAJ_T0076736.1 MGP_CBAJ_G0030290.1 mouse_genomes_project 6 41664755 41843766 + MGP_CBAJ_P0076736 Mgam protein_coding protein_coding MGP_CBAJ_T0076737.1 MGP_CBAJ_G0030290.1 mouse_genomes_project 6 41683178 41842927 + MGP_CBAJ_P0076737 Mgam protein_coding unknown_likely_coding MGP_CBAJ_T0076738.1 MGP_CBAJ_G0030290.1 mouse_genomes_project 6 41712412 41839024 + MGP_CBAJ_P0076738 Mgam protein_coding protein_coding MGP_CBAJ_T0076739.1 MGP_CBAJ_G0030290.1 mouse_genomes_project 6 41751309 41843098 + MGP_CBAJ_P0076739 Mgam protein_coding protein_coding MGP_CBAJ_T0076740.1 MGP_CBAJ_G0030290.1 mouse_genomes_project 6 41823721 41843757 + Mgam protein_coding processed_transcript MGP_CBAJ_T0076846.1 MGP_CBAJ_G0030333.1 mouse_genomes_project 6 44042607 44043517 + MGP_CBAJ_P0076846 protein_coding protein_coding MGP_CBAJ_T0102043.1 MGP_CBAJ_G0040073.1 mouse_genomes_project 6 146210697 146211639 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0008586.1 MGP_CBAJ_G0006929.1 mouse_genomes_project 6 109730310 109798480 + Gm43950 lincRNA lincRNA MGP_CBAJ_T0015193.1 MGP_CBAJ_G0013305.1 mouse_genomes_project 6 72076618 72077673 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0079187.1 MGP_CBAJ_G0030838.1 mouse_genomes_project 6 127204870 127248324 - MGP_CBAJ_P0079187 Rassf4 protein_coding protein_coding MGP_CBAJ_T0079188.1 MGP_CBAJ_G0030838.1 mouse_genomes_project 6 127211108 127248181 - MGP_CBAJ_P0079188 Rassf4 protein_coding protein_coding MGP_CBAJ_T0079189.1 MGP_CBAJ_G0030838.1 mouse_genomes_project 6 127211372 127212895 - Rassf4 protein_coding processed_transcript MGP_CBAJ_T0079190.1 MGP_CBAJ_G0030838.1 mouse_genomes_project 6 127214827 127248161 - Rassf4 protein_coding retained_intron MGP_CBAJ_T0079191.1 MGP_CBAJ_G0030838.1 mouse_genomes_project 6 127217148 127219910 - Rassf4 protein_coding retained_intron MGP_CBAJ_T0079192.1 MGP_CBAJ_G0030838.1 mouse_genomes_project 6 127217819 127248143 - MGP_CBAJ_P0079192 Rassf4 protein_coding protein_coding MGP_CBAJ_T0079193.1 MGP_CBAJ_G0030838.1 mouse_genomes_project 6 127217890 127248170 - MGP_CBAJ_P0079193 Rassf4 protein_coding protein_coding MGP_CBAJ_T0005024.1 MGP_CBAJ_G0004283.1 mouse_genomes_project 6 148763613 148824535 + Gm44276 antisense antisense MGP_CBAJ_T0001971.1 MGP_CBAJ_G0001887.1 mouse_genomes_project 6 77213605 77214231 - TEC TEC MGP_CBAJ_T0079677.1 MGP_CBAJ_G0030935.1 mouse_genomes_project 6 136563001 136579673 - MGP_CBAJ_P0079677 P3h3 protein_coding protein_coding MGP_CBAJ_T0079678.1 MGP_CBAJ_G0030935.1 mouse_genomes_project 6 136563118 136579650 - MGP_CBAJ_P0079678 P3h3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079679.1 MGP_CBAJ_G0030935.1 mouse_genomes_project 6 136563406 136564524 - P3h3 protein_coding retained_intron MGP_CBAJ_T0079680.1 MGP_CBAJ_G0030935.1 mouse_genomes_project 6 136567237 136572870 - P3h3 protein_coding retained_intron MGP_CBAJ_T0079681.1 MGP_CBAJ_G0030935.1 mouse_genomes_project 6 136567885 136576845 - P3h3 protein_coding retained_intron MGP_CBAJ_T0079682.1 MGP_CBAJ_G0030935.1 mouse_genomes_project 6 136567927 136576748 - P3h3 protein_coding retained_intron MGP_CBAJ_T0079683.1 MGP_CBAJ_G0030935.1 mouse_genomes_project 6 136576316 136577091 - P3h3 protein_coding retained_intron MGP_CBAJ_T0010670.1 MGP_CBAJ_G0008808.1 mouse_genomes_project 6 114658784 114658862 + Gm25570 miRNA miRNA MGP_CBAJ_T0076364.1 MGP_CBAJ_G0030215.1 mouse_genomes_project 6 30439041 30461861 + MGP_CBAJ_P0076364 Cpa5 protein_coding protein_coding MGP_CBAJ_T0076365.1 MGP_CBAJ_G0030215.1 mouse_genomes_project 6 30439082 30461636 + MGP_CBAJ_P0076365 Cpa5 protein_coding protein_coding MGP_CBAJ_T0076366.1 MGP_CBAJ_G0030215.1 mouse_genomes_project 6 30440219 30461859 + MGP_CBAJ_P0076366 Cpa5 protein_coding protein_coding MGP_CBAJ_T0076367.1 MGP_CBAJ_G0030215.1 mouse_genomes_project 6 30440586 30461552 + MGP_CBAJ_P0076367 Cpa5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0002014.1 MGP_CBAJ_G0001930.1 mouse_genomes_project 6 93902191 93904553 - TEC TEC MGP_CBAJ_T0075893.1 MGP_CBAJ_G0030128.1 mouse_genomes_project 6 9430908 9438711 - MGP_CBAJ_P0075893 Ndufa4 protein_coding protein_coding MGP_CBAJ_T0075894.1 MGP_CBAJ_G0030128.1 mouse_genomes_project 6 9431718 9438775 - Ndufa4 protein_coding retained_intron MGP_CBAJ_T0079093.1 MGP_CBAJ_G0030820.1 mouse_genomes_project 6 126216340 126245076 + MGP_CBAJ_P0079093 Cand2 protein_coding protein_coding MGP_CBAJ_T0004903.1 MGP_CBAJ_G0004201.1 mouse_genomes_project 6 89426704 89429711 + Gm17034 antisense antisense MGP_CBAJ_T0079042.1 MGP_CBAJ_G0030810.1 mouse_genomes_project 6 125356024 125392571 - MGP_CBAJ_P0079042 Tamm41 protein_coding protein_coding MGP_CBAJ_T0079043.1 MGP_CBAJ_G0030810.1 mouse_genomes_project 6 125356031 125364198 - Tamm41 protein_coding retained_intron MGP_CBAJ_T0079044.1 MGP_CBAJ_G0030810.1 mouse_genomes_project 6 125359807 125368055 - Tamm41 protein_coding retained_intron MGP_CBAJ_T0079045.1 MGP_CBAJ_G0030810.1 mouse_genomes_project 6 125362504 125386603 - MGP_CBAJ_P0079045 Tamm41 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079046.1 MGP_CBAJ_G0030810.1 mouse_genomes_project 6 125363877 125392550 - MGP_CBAJ_P0079046 Tamm41 protein_coding protein_coding MGP_CBAJ_T0079047.1 MGP_CBAJ_G0030810.1 mouse_genomes_project 6 125367882 125392520 - MGP_CBAJ_P0079047 Tamm41 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079048.1 MGP_CBAJ_G0030810.1 mouse_genomes_project 6 125378702 125392571 - Tamm41 protein_coding retained_intron MGP_CBAJ_T0079049.1 MGP_CBAJ_G0030810.1 mouse_genomes_project 6 125385616 125386604 - Tamm41 protein_coding processed_transcript MGP_CBAJ_T0015141.1 MGP_CBAJ_G0013253.1 mouse_genomes_project 6 61816536 61816700 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002055.1 MGP_CBAJ_G0001971.1 mouse_genomes_project 6 101003855 101006337 + TEC TEC MGP_CBAJ_T0077763.1 MGP_CBAJ_G0030565.1 mouse_genomes_project 6 86084451 86084900 + MGP_CBAJ_P0077763 Gm20594 protein_coding protein_coding MGP_CBAJ_T0011530.1 MGP_CBAJ_G0009668.1 mouse_genomes_project 6 90498093 90498559 + Gm27631 misc_RNA misc_RNA MGP_CBAJ_T0079464.1 MGP_CBAJ_G0030885.1 mouse_genomes_project 6 133695854 133703652 + MGP_CBAJ_P0079464 M6pr protein_coding protein_coding MGP_CBAJ_T0079465.1 MGP_CBAJ_G0030885.1 mouse_genomes_project 6 133696133 133703643 + M6pr protein_coding retained_intron MGP_CBAJ_T0015279.1 MGP_CBAJ_G0013391.1 mouse_genomes_project 6 103280200 103284415 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100675.1 MGP_CBAJ_G0038930.1 mouse_genomes_project 6 72313786 72313922 - Gm24911 snoRNA snoRNA MGP_CBAJ_T0005013.1 MGP_CBAJ_G0004274.1 mouse_genomes_project 6 140716563 140766743 + Gm10069 antisense antisense MGP_CBAJ_T0005014.1 MGP_CBAJ_G0004274.1 mouse_genomes_project 6 140717145 140801031 + Gm10069 antisense antisense MGP_CBAJ_T0005015.1 MGP_CBAJ_G0004274.1 mouse_genomes_project 6 140764715 140783978 + Gm10069 antisense antisense MGP_CBAJ_T0076782.1 MGP_CBAJ_G0030313.1 mouse_genomes_project 6 43370547 43371507 + MGP_CBAJ_P0076782 Tas2r139 protein_coding protein_coding MGP_CBAJ_T0078184.1 MGP_CBAJ_G0030642.1 mouse_genomes_project 6 93866388 93867935 + MGP_CBAJ_P0078184 Asprv1 protein_coding protein_coding MGP_CBAJ_T0079841.1 MGP_CBAJ_G0030963.1 mouse_genomes_project 6 137556954 137859187 + Ano2 protein_coding retained_intron MGP_CBAJ_T0079842.1 MGP_CBAJ_G0030963.1 mouse_genomes_project 6 137556954 137946615 + MGP_CBAJ_P0079842 Ano2 protein_coding protein_coding MGP_CBAJ_T0079843.1 MGP_CBAJ_G0030963.1 mouse_genomes_project 6 137579650 137946615 + MGP_CBAJ_P0079843 Ano2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079844.1 MGP_CBAJ_G0030963.1 mouse_genomes_project 6 137580500 137672855 + Ano2 protein_coding processed_transcript MGP_CBAJ_T0079845.1 MGP_CBAJ_G0030963.1 mouse_genomes_project 6 137580614 137946003 + MGP_CBAJ_P0079845 Ano2 protein_coding unknown_likely_coding MGP_CBAJ_T0079846.1 MGP_CBAJ_G0030963.1 mouse_genomes_project 6 137702560 137797070 + Ano2 protein_coding processed_transcript MGP_CBAJ_T0079847.1 MGP_CBAJ_G0030963.1 mouse_genomes_project 6 137702561 137946613 + MGP_CBAJ_P0079847 Ano2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076158.1 MGP_CBAJ_G0030181.1 mouse_genomes_project 6 27905872 27911508 - MGP_CBAJ_P0076158 Gcc1 protein_coding protein_coding MGP_CBAJ_T0076159.1 MGP_CBAJ_G0030181.1 mouse_genomes_project 6 27907610 27918098 - MGP_CBAJ_P0076159 Gcc1 protein_coding protein_coding MGP_CBAJ_T0076160.1 MGP_CBAJ_G0030181.1 mouse_genomes_project 6 27909443 27910642 - MGP_CBAJ_P0076160 Gcc1 protein_coding protein_coding MGP_CBAJ_T0076161.1 MGP_CBAJ_G0030181.1 mouse_genomes_project 6 27911063 27913933 - MGP_CBAJ_P0076161 Gcc1 protein_coding protein_coding MGP_CBAJ_T0005549.1 MGP_CBAJ_G0004666.1 mouse_genomes_project 6 126682978 126691648 - 9530062K07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_CBAJ_T0002110.1 MGP_CBAJ_G0002025.1 mouse_genomes_project 6 140355568 140356986 - TEC TEC MGP_CBAJ_T0015086.1 MGP_CBAJ_G0013198.1 mouse_genomes_project 6 42107842 42108030 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099467.1 MGP_CBAJ_G0037722.1 mouse_genomes_project 6 149889160 149889350 + Gm26105 snRNA snRNA MGP_CBAJ_T0080341.1 MGP_CBAJ_G0031107.1 mouse_genomes_project 6 153721696 153730633 - MGP_CBAJ_P0080341 Rergl protein_coding protein_coding MGP_CBAJ_T0101981.1 MGP_CBAJ_G0040012.1 mouse_genomes_project 6 43982754 43983102 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0008618.1 MGP_CBAJ_G0006957.1 mouse_genomes_project 6 136001347 136003797 + Gm43971 lincRNA lincRNA MGP_CBAJ_T0076784.1 MGP_CBAJ_G0030315.1 mouse_genomes_project 6 43467601 43472108 + MGP_CBAJ_P0076784 Gstk1 protein_coding protein_coding MGP_CBAJ_T0076785.1 MGP_CBAJ_G0030315.1 mouse_genomes_project 6 43467645 43472108 + MGP_CBAJ_P0076785 Gstk1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076786.1 MGP_CBAJ_G0030315.1 mouse_genomes_project 6 43467655 43472114 + Gstk1 protein_coding retained_intron MGP_CBAJ_T0076787.1 MGP_CBAJ_G0030315.1 mouse_genomes_project 6 43467689 43471986 + Gstk1 protein_coding processed_transcript MGP_CBAJ_T0076586.1 MGP_CBAJ_G0030255.1 mouse_genomes_project 6 38724356 38736532 + MGP_CBAJ_P0076586 Tmem213 protein_coding protein_coding MGP_CBAJ_T0001987.1 MGP_CBAJ_G0001903.1 mouse_genomes_project 6 83623761 83626997 - TEC TEC MGP_CBAJ_T0000258.1 MGP_CBAJ_G0000203.1 mouse_genomes_project 6 72090910 72091163 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0098079.1 MGP_CBAJ_G0036352.1 mouse_genomes_project 6 145672827 145679222 + n-R5s166 rRNA rRNA MGP_CBAJ_T0011518.1 MGP_CBAJ_G0009656.1 mouse_genomes_project 6 54824873 54825060 + Gm27492 misc_RNA misc_RNA MGP_CBAJ_T0079658.1 MGP_CBAJ_G0030932.1 mouse_genomes_project 6 136536931 136551397 - MGP_CBAJ_P0079658 Usp5 protein_coding protein_coding MGP_CBAJ_T0079659.1 MGP_CBAJ_G0030932.1 mouse_genomes_project 6 136536950 136551348 - MGP_CBAJ_P0079659 Usp5 protein_coding protein_coding MGP_CBAJ_T0079660.1 MGP_CBAJ_G0030932.1 mouse_genomes_project 6 136537332 136540550 - Usp5 protein_coding retained_intron MGP_CBAJ_T0079661.1 MGP_CBAJ_G0030932.1 mouse_genomes_project 6 136539158 136539806 - Usp5 protein_coding retained_intron MGP_CBAJ_T0079662.1 MGP_CBAJ_G0030932.1 mouse_genomes_project 6 136543687 136545382 - Usp5 protein_coding retained_intron MGP_CBAJ_T0079663.1 MGP_CBAJ_G0030932.1 mouse_genomes_project 6 136544531 136551321 - MGP_CBAJ_P0079663 Usp5 protein_coding protein_coding MGP_CBAJ_T0079664.1 MGP_CBAJ_G0030932.1 mouse_genomes_project 6 136544639 136545536 - Usp5 protein_coding retained_intron MGP_CBAJ_T0079665.1 MGP_CBAJ_G0030932.1 mouse_genomes_project 6 136544755 136546113 - Usp5 protein_coding retained_intron MGP_CBAJ_T0079666.1 MGP_CBAJ_G0030932.1 mouse_genomes_project 6 136546048 136550808 - MGP_CBAJ_P0079666 Usp5 protein_coding protein_coding MGP_CBAJ_T0100710.1 MGP_CBAJ_G0038965.1 mouse_genomes_project 6 144268588 144268722 - Gm22362 snoRNA snoRNA MGP_CBAJ_T0077136.1 MGP_CBAJ_G0030404.1 mouse_genomes_project 6 54008762 54075510 + MGP_CBAJ_P0077136 Snx10 protein_coding protein_coding MGP_CBAJ_T0077137.1 MGP_CBAJ_G0030404.1 mouse_genomes_project 6 54008843 54052923 + Snx10 protein_coding retained_intron MGP_CBAJ_T0077138.1 MGP_CBAJ_G0030404.1 mouse_genomes_project 6 54009119 54064849 + MGP_CBAJ_P0077138 Snx10 protein_coding protein_coding MGP_CBAJ_T0077139.1 MGP_CBAJ_G0030404.1 mouse_genomes_project 6 54009144 54073267 + MGP_CBAJ_P0077139 Snx10 protein_coding protein_coding MGP_CBAJ_T0077140.1 MGP_CBAJ_G0030404.1 mouse_genomes_project 6 54029298 54075501 + MGP_CBAJ_P0077140 Snx10 protein_coding protein_coding MGP_CBAJ_T0077141.1 MGP_CBAJ_G0030404.1 mouse_genomes_project 6 54029299 54073903 + MGP_CBAJ_P0077141 Snx10 protein_coding protein_coding MGP_CBAJ_T0077142.1 MGP_CBAJ_G0030404.1 mouse_genomes_project 6 54029341 54073874 + MGP_CBAJ_P0077142 Snx10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0017996.1 MGP_CBAJ_G0015370.1 mouse_genomes_project 6 50960356 50978978 - Gm44764 processed_transcript lincRNA MGP_CBAJ_T0017997.1 MGP_CBAJ_G0015370.1 mouse_genomes_project 6 50978165 50978985 - Gm44764 processed_transcript retained_intron MGP_CBAJ_T0001944.1 MGP_CBAJ_G0001860.1 mouse_genomes_project 6 49569538 49571123 + TEC TEC MGP_CBAJ_T0079581.1 MGP_CBAJ_G0030917.1 mouse_genomes_project 6 136259295 136272532 + MGP_CBAJ_P0079581 protein_coding protein_coding MGP_CBAJ_T0080254.1 MGP_CBAJ_G0031091.1 mouse_genomes_project 6 150559957 150568737 + BC049715 protein_coding retained_intron MGP_CBAJ_T0080255.1 MGP_CBAJ_G0031091.1 mouse_genomes_project 6 150560311 150618782 + MGP_CBAJ_P0080255 BC049715 protein_coding protein_coding MGP_CBAJ_T0080256.1 MGP_CBAJ_G0031091.1 mouse_genomes_project 6 150561166 150619520 + MGP_CBAJ_P0080256 BC049715 protein_coding protein_coding MGP_CBAJ_T0080258.1 MGP_CBAJ_G0031091.1 mouse_genomes_project 6 150618747 150619491 + MGP_CBAJ_P0080258 BC049715 protein_coding protein_coding MGP_CBAJ_T0101158.1 MGP_CBAJ_G0039340.1 mouse_genomes_project 6 43343087 43345888 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101159.1 MGP_CBAJ_G0039340.1 mouse_genomes_project 6 43345447 43345807 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0076822.1 MGP_CBAJ_G0030321.1 mouse_genomes_project 6 43594687 43610639 - MGP_CBAJ_P0076822 Epha1 protein_coding protein_coding MGP_CBAJ_T0076823.1 MGP_CBAJ_G0030321.1 mouse_genomes_project 6 43594916 43610639 - MGP_CBAJ_P0076823 Epha1 protein_coding protein_coding MGP_CBAJ_T0076824.1 MGP_CBAJ_G0030321.1 mouse_genomes_project 6 43604412 43610606 - Epha1 protein_coding retained_intron MGP_CBAJ_T0077359.1 MGP_CBAJ_G0030466.1 mouse_genomes_project 6 60600627 60601745 + MGP_CBAJ_P0077359 Vmn1r19 protein_coding protein_coding MGP_CBAJ_T0078710.1 MGP_CBAJ_G0030749.1 mouse_genomes_project 6 108215925 108218313 + MGP_CBAJ_P0078710 Gpr27 protein_coding protein_coding MGP_CBAJ_T0076811.1 MGP_CBAJ_G0030320.1 mouse_genomes_project 6 43585830 43587349 + MGP_CBAJ_P0076811 Zyx protein_coding protein_coding MGP_CBAJ_T0076812.1 MGP_CBAJ_G0030320.1 mouse_genomes_project 6 43585980 43587808 + MGP_CBAJ_P0076812 Zyx protein_coding protein_coding MGP_CBAJ_T0076813.1 MGP_CBAJ_G0030320.1 mouse_genomes_project 6 43586028 43594763 + MGP_CBAJ_P0076813 Zyx protein_coding protein_coding MGP_CBAJ_T0076814.1 MGP_CBAJ_G0030320.1 mouse_genomes_project 6 43586069 43594593 + MGP_CBAJ_P0076814 Zyx protein_coding protein_coding MGP_CBAJ_T0076815.1 MGP_CBAJ_G0030320.1 mouse_genomes_project 6 43586233 43594593 + Zyx protein_coding retained_intron MGP_CBAJ_T0076816.1 MGP_CBAJ_G0030320.1 mouse_genomes_project 6 43586233 43594593 + MGP_CBAJ_P0076816 Zyx protein_coding protein_coding MGP_CBAJ_T0076817.1 MGP_CBAJ_G0030320.1 mouse_genomes_project 6 43586238 43587965 + Zyx protein_coding processed_transcript MGP_CBAJ_T0076818.1 MGP_CBAJ_G0030320.1 mouse_genomes_project 6 43586239 43596414 + MGP_CBAJ_P0076818 Zyx protein_coding protein_coding MGP_CBAJ_T0076819.1 MGP_CBAJ_G0030320.1 mouse_genomes_project 6 43586271 43587265 + MGP_CBAJ_P0076819 Zyx protein_coding protein_coding MGP_CBAJ_T0076820.1 MGP_CBAJ_G0030320.1 mouse_genomes_project 6 43589678 43592238 + Zyx protein_coding processed_transcript MGP_CBAJ_T0076821.1 MGP_CBAJ_G0030320.1 mouse_genomes_project 6 43591337 43592462 + Zyx protein_coding processed_transcript MGP_CBAJ_T0001997.1 MGP_CBAJ_G0001913.1 mouse_genomes_project 6 86792661 86798263 + TEC TEC MGP_CBAJ_T0015065.1 MGP_CBAJ_G0013177.1 mouse_genomes_project 6 29444435 29444800 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0076763.1 MGP_CBAJ_G0030305.1 mouse_genomes_project 6 42921738 42923025 + MGP_CBAJ_P0076763 1700034O15Rik protein_coding protein_coding MGP_CBAJ_T0076751.1 MGP_CBAJ_G0030299.1 mouse_genomes_project 6 42568479 42583203 + MGP_CBAJ_P0076751 protein_coding protein_coding MGP_CBAJ_T0004967.1 MGP_CBAJ_G0004236.1 mouse_genomes_project 6 111128033 111170373 + Gm44188 antisense antisense MGP_CBAJ_T0004968.1 MGP_CBAJ_G0004236.1 mouse_genomes_project 6 111128055 111203444 + Gm44188 antisense antisense MGP_CBAJ_T0004909.1 MGP_CBAJ_G0004204.1 mouse_genomes_project 6 89878680 89885258 - Gm15624 antisense antisense MGP_CBAJ_T0004910.1 MGP_CBAJ_G0004204.1 mouse_genomes_project 6 89881878 89885280 - Gm15624 antisense antisense MGP_CBAJ_T0004911.1 MGP_CBAJ_G0004204.1 mouse_genomes_project 6 89882328 89885079 - Gm15624 antisense antisense MGP_CBAJ_T0002130.1 MGP_CBAJ_G0002045.1 mouse_genomes_project 6 153829050 153830332 - TEC TEC MGP_CBAJ_T0078244.1 MGP_CBAJ_G0030653.1 mouse_genomes_project 6 94651030 94657181 + MGP_CBAJ_P0078244 Gkn2 protein_coding protein_coding MGP_CBAJ_T0008477.1 MGP_CBAJ_G0006845.1 mouse_genomes_project 6 50445753 50464151 - Gm44696 lincRNA lincRNA MGP_CBAJ_T0079806.1 MGP_CBAJ_G0030955.1 mouse_genomes_project 6 137009189 137013544 - MGP_CBAJ_P0079806 Cd27 protein_coding protein_coding MGP_CBAJ_T0079807.1 MGP_CBAJ_G0030955.1 mouse_genomes_project 6 137009690 137013528 - MGP_CBAJ_P0079807 Cd27 protein_coding protein_coding MGP_CBAJ_T0079808.1 MGP_CBAJ_G0030955.1 mouse_genomes_project 6 137009761 137013487 - MGP_CBAJ_P0079808 Cd27 protein_coding protein_coding MGP_CBAJ_T0079809.1 MGP_CBAJ_G0030955.1 mouse_genomes_project 6 137010095 137011354 - Cd27 protein_coding retained_intron MGP_CBAJ_T0079810.1 MGP_CBAJ_G0030955.1 mouse_genomes_project 6 137010231 137011214 - Cd27 protein_coding retained_intron MGP_CBAJ_T0079811.1 MGP_CBAJ_G0030955.1 mouse_genomes_project 6 137012642 137013537 - Cd27 protein_coding retained_intron MGP_CBAJ_T0008573.1 MGP_CBAJ_G0006919.1 mouse_genomes_project 6 98996771 98997540 + 1810044D09Rik lincRNA lincRNA MGP_CBAJ_T0079595.1 MGP_CBAJ_G0030922.1 mouse_genomes_project 6 136422000 136426329 - Emg1 protein_coding retained_intron MGP_CBAJ_T0079596.1 MGP_CBAJ_G0030922.1 mouse_genomes_project 6 136422296 136430081 - MGP_CBAJ_P0079596 Emg1 protein_coding protein_coding MGP_CBAJ_T0079597.1 MGP_CBAJ_G0030922.1 mouse_genomes_project 6 136422297 136423575 - Emg1 protein_coding processed_transcript MGP_CBAJ_T0079598.1 MGP_CBAJ_G0030922.1 mouse_genomes_project 6 136422373 136429972 - Emg1 protein_coding retained_intron MGP_CBAJ_T0079599.1 MGP_CBAJ_G0030922.1 mouse_genomes_project 6 136422866 136430044 - Emg1 protein_coding retained_intron MGP_CBAJ_T0079600.1 MGP_CBAJ_G0030922.1 mouse_genomes_project 6 136423075 136429960 - MGP_CBAJ_P0079600 Emg1 protein_coding protein_coding MGP_CBAJ_T0015339.1 MGP_CBAJ_G0013451.1 mouse_genomes_project 6 128144636 128145057 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015154.1 MGP_CBAJ_G0013266.1 mouse_genomes_project 6 66474550 66475682 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0077153.1 MGP_CBAJ_G0030408.1 mouse_genomes_project 6 54732090 54788782 - MGP_CBAJ_P0077153 Gm28308 protein_coding protein_coding MGP_CBAJ_T0099455.1 MGP_CBAJ_G0037710.1 mouse_genomes_project 6 129640690 129640791 + Gm25905 snRNA snRNA MGP_CBAJ_T0001996.1 MGP_CBAJ_G0001912.1 mouse_genomes_project 6 86652270 86653932 + TEC TEC MGP_CBAJ_T0001877.1 MGP_CBAJ_G0001793.1 mouse_genomes_project 6 1855667 1855987 + TEC TEC MGP_CBAJ_T0015250.1 MGP_CBAJ_G0013362.1 mouse_genomes_project 6 92078960 92079102 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002673.1 MGP_CBAJ_G0002553.1 mouse_genomes_project 6 42384978 42385255 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0002032.1 MGP_CBAJ_G0001948.1 mouse_genomes_project 6 95891395 95892390 + TEC TEC MGP_CBAJ_T0077492.1 MGP_CBAJ_G0030505.1 mouse_genomes_project 6 70986478 70987512 - MGP_CBAJ_P0077492 Vmn1r34 protein_coding protein_coding MGP_CBAJ_T0015232.1 MGP_CBAJ_G0013344.1 mouse_genomes_project 6 84629876 84630848 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100660.1 MGP_CBAJ_G0038915.1 mouse_genomes_project 6 43497330 43497408 + Gm25108 snoRNA snoRNA MGP_CBAJ_T0078571.1 MGP_CBAJ_G0030722.1 mouse_genomes_project 6 99800086 99811308 - MGP_CBAJ_P0078571 Mrps25 protein_coding protein_coding MGP_CBAJ_T0078572.1 MGP_CBAJ_G0030722.1 mouse_genomes_project 6 99802126 99803191 - Mrps25 protein_coding retained_intron MGP_CBAJ_T0078573.1 MGP_CBAJ_G0030722.1 mouse_genomes_project 6 99805587 99811246 - Mrps25 protein_coding retained_intron MGP_CBAJ_T0002050.1 MGP_CBAJ_G0001966.1 mouse_genomes_project 6 99557054 99558314 - TEC TEC MGP_CBAJ_T0015265.1 MGP_CBAJ_G0013377.1 mouse_genomes_project 6 99000598 99002438 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0080041.1 MGP_CBAJ_G0031015.1 mouse_genomes_project 6 142150665 142159834 + MGP_CBAJ_P0080041 Klrd1 protein_coding protein_coding MGP_CBAJ_T0080042.1 MGP_CBAJ_G0031015.1 mouse_genomes_project 6 142150665 142159532 + MGP_CBAJ_P0080042 Klrd1 protein_coding protein_coding MGP_CBAJ_T0080043.1 MGP_CBAJ_G0031015.1 mouse_genomes_project 6 142150693 142159829 + MGP_CBAJ_P0080043 Klrd1 protein_coding protein_coding MGP_CBAJ_T0080044.1 MGP_CBAJ_G0031015.1 mouse_genomes_project 6 142150708 142159676 + MGP_CBAJ_P0080044 Klrd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080045.1 MGP_CBAJ_G0031015.1 mouse_genomes_project 6 142154113 142159516 + MGP_CBAJ_P0080045 Klrd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080046.1 MGP_CBAJ_G0031015.1 mouse_genomes_project 6 142155166 142159515 + Klrd1 protein_coding retained_intron MGP_CBAJ_T0080265.1 MGP_CBAJ_G0031096.1 mouse_genomes_project 6 150710853 150732331 - MGP_CBAJ_P0080265 Arhgdib protein_coding protein_coding MGP_CBAJ_T0080266.1 MGP_CBAJ_G0031096.1 mouse_genomes_project 6 150710853 150732581 - MGP_CBAJ_P0080266 Arhgdib protein_coding protein_coding MGP_CBAJ_T0080268.1 MGP_CBAJ_G0031096.1 mouse_genomes_project 6 150711199 150732749 - MGP_CBAJ_P0080268 Arhgdib protein_coding protein_coding MGP_CBAJ_T0080269.1 MGP_CBAJ_G0031096.1 mouse_genomes_project 6 150711410 150732718 - MGP_CBAJ_P0080269 Arhgdib protein_coding protein_coding MGP_CBAJ_T0080270.1 MGP_CBAJ_G0031096.1 mouse_genomes_project 6 150720908 150730417 - MGP_CBAJ_P0080270 Arhgdib protein_coding protein_coding MGP_CBAJ_T0002628.1 MGP_CBAJ_G0002515.1 mouse_genomes_project 6 42322780 42323273 + MGP_CBAJ_P0002628 Trbv21 TR_V_gene TR_V_gene MGP_CBAJ_T0002629.1 MGP_CBAJ_G0002515.1 mouse_genomes_project 6 42322985 42323275 + MGP_CBAJ_P0002629 Trbv21 TR_V_gene TR_V_gene MGP_CBAJ_T0080156.1 MGP_CBAJ_G0031070.1 mouse_genomes_project 6 148100017 148190972 - MGP_CBAJ_P0080156 Dusp16 protein_coding protein_coding MGP_CBAJ_T0080157.1 MGP_CBAJ_G0031070.1 mouse_genomes_project 6 148100022 148191122 - MGP_CBAJ_P0080157 Dusp16 protein_coding protein_coding MGP_CBAJ_T0080158.1 MGP_CBAJ_G0031070.1 mouse_genomes_project 6 148102382 148155429 - MGP_CBAJ_P0080158 Dusp16 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080159.1 MGP_CBAJ_G0031070.1 mouse_genomes_project 6 148103337 148110569 - Dusp16 protein_coding retained_intron MGP_CBAJ_T0080160.1 MGP_CBAJ_G0031070.1 mouse_genomes_project 6 148103489 148128162 - Dusp16 protein_coding processed_transcript MGP_CBAJ_T0080161.1 MGP_CBAJ_G0031070.1 mouse_genomes_project 6 148105144 148153199 - MGP_CBAJ_P0080161 Dusp16 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080162.1 MGP_CBAJ_G0031070.1 mouse_genomes_project 6 148121865 148189819 - MGP_CBAJ_P0080162 Dusp16 protein_coding protein_coding MGP_CBAJ_T0002067.1 MGP_CBAJ_G0001983.1 mouse_genomes_project 6 109870888 109873748 + TEC TEC MGP_CBAJ_T0008528.1 MGP_CBAJ_G0006886.1 mouse_genomes_project 6 77625822 77630679 + Gm45050 lincRNA lincRNA MGP_CBAJ_T0000289.1 MGP_CBAJ_G0000234.1 mouse_genomes_project 6 74285073 74285601 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0015003.1 MGP_CBAJ_G0013115.1 mouse_genomes_project 6 636319 636707 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0076179.1 MGP_CBAJ_G0030186.1 mouse_genomes_project 6 28169180 28347822 - MGP_CBAJ_P0076179 Lrrc4 protein_coding protein_coding MGP_CBAJ_T0076184.1 MGP_CBAJ_G0030186.1 mouse_genomes_project 6 28345609 28349224 - MGP_CBAJ_P0076184 Lrrc4 protein_coding protein_coding MGP_CBAJ_T0076422.1 MGP_CBAJ_G0030225.1 mouse_genomes_project 6 32121995 32582759 - MGP_CBAJ_P0076422 Plxna4 protein_coding protein_coding MGP_CBAJ_T0076423.1 MGP_CBAJ_G0030225.1 mouse_genomes_project 6 32206795 32208222 - Plxna4 protein_coding retained_intron MGP_CBAJ_T0008515.1 MGP_CBAJ_G0006874.1 mouse_genomes_project 6 64749925 64754476 - Gm43893 lincRNA lincRNA MGP_CBAJ_T0010666.1 MGP_CBAJ_G0008804.1 mouse_genomes_project 6 102800981 102801049 + Gm23364 miRNA miRNA MGP_CBAJ_T0077354.1 MGP_CBAJ_G0030461.1 mouse_genomes_project 6 60424633 60426162 + MGP_CBAJ_P0077354 Vmn1r14 protein_coding protein_coding MGP_CBAJ_T0077200.1 MGP_CBAJ_G0030423.1 mouse_genomes_project 6 55997078 56115943 + 9430076C15Rik protein_coding retained_intron MGP_CBAJ_T0077201.1 MGP_CBAJ_G0030423.1 mouse_genomes_project 6 55997078 56439283 + MGP_CBAJ_P0077201 9430076C15Rik protein_coding protein_coding MGP_CBAJ_T0077202.1 MGP_CBAJ_G0030423.1 mouse_genomes_project 6 55997094 56120133 + 9430076C15Rik protein_coding processed_transcript MGP_CBAJ_T0077203.1 MGP_CBAJ_G0030423.1 mouse_genomes_project 6 55997103 56122637 + 9430076C15Rik protein_coding processed_transcript MGP_CBAJ_T0077204.1 MGP_CBAJ_G0030423.1 mouse_genomes_project 6 55997126 55998528 + 9430076C15Rik protein_coding processed_transcript MGP_CBAJ_T0077205.1 MGP_CBAJ_G0030423.1 mouse_genomes_project 6 55997126 56380644 + 9430076C15Rik protein_coding processed_transcript MGP_CBAJ_T0077206.1 MGP_CBAJ_G0030423.1 mouse_genomes_project 6 55997126 56113364 + 9430076C15Rik protein_coding processed_transcript MGP_CBAJ_T0077207.1 MGP_CBAJ_G0030423.1 mouse_genomes_project 6 55997126 56342257 + 9430076C15Rik protein_coding retained_intron MGP_CBAJ_T0077208.1 MGP_CBAJ_G0030423.1 mouse_genomes_project 6 55997129 56138878 + 9430076C15Rik protein_coding processed_transcript MGP_CBAJ_T0077209.1 MGP_CBAJ_G0030423.1 mouse_genomes_project 6 56000243 56431784 + MGP_CBAJ_P0077209 9430076C15Rik protein_coding protein_coding MGP_CBAJ_T0077210.1 MGP_CBAJ_G0030423.1 mouse_genomes_project 6 56025234 56431784 + MGP_CBAJ_P0077210 9430076C15Rik protein_coding protein_coding MGP_CBAJ_T0077211.1 MGP_CBAJ_G0030423.1 mouse_genomes_project 6 56302935 56439274 + MGP_CBAJ_P0077211 9430076C15Rik protein_coding protein_coding MGP_CBAJ_T0077212.1 MGP_CBAJ_G0030423.1 mouse_genomes_project 6 56303010 56343748 + 9430076C15Rik protein_coding retained_intron MGP_CBAJ_T0077213.1 MGP_CBAJ_G0030423.1 mouse_genomes_project 6 56303011 56340603 + MGP_CBAJ_P0077213 9430076C15Rik protein_coding protein_coding MGP_CBAJ_T0001938.1 MGP_CBAJ_G0001854.1 mouse_genomes_project 6 47729202 47733733 + TEC TEC MGP_CBAJ_T0077332.1 MGP_CBAJ_G0030450.1 mouse_genomes_project 6 59945018 59994863 + MGP_CBAJ_P0077332 Fkbp9 protein_coding protein_coding MGP_CBAJ_T0077333.1 MGP_CBAJ_G0030450.1 mouse_genomes_project 6 59961632 59962960 + Fkbp9 protein_coding retained_intron MGP_CBAJ_T0015258.1 MGP_CBAJ_G0013370.1 mouse_genomes_project 6 93074846 93075623 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0076325.1 MGP_CBAJ_G0030209.1 mouse_genomes_project 6 30146605 30173614 - MGP_CBAJ_P0076325 Zc3hc1 protein_coding protein_coding MGP_CBAJ_T0076326.1 MGP_CBAJ_G0030209.1 mouse_genomes_project 6 30146609 30173593 - MGP_CBAJ_P0076326 Zc3hc1 protein_coding protein_coding MGP_CBAJ_T0076327.1 MGP_CBAJ_G0030209.1 mouse_genomes_project 6 30146613 30148121 - Zc3hc1 protein_coding retained_intron MGP_CBAJ_T0076328.1 MGP_CBAJ_G0030209.1 mouse_genomes_project 6 30146613 30173619 - MGP_CBAJ_P0076328 Zc3hc1 protein_coding protein_coding MGP_CBAJ_T0076329.1 MGP_CBAJ_G0030209.1 mouse_genomes_project 6 30146699 30173601 - MGP_CBAJ_P0076329 Zc3hc1 protein_coding protein_coding MGP_CBAJ_T0076330.1 MGP_CBAJ_G0030209.1 mouse_genomes_project 6 30146902 30173593 - MGP_CBAJ_P0076330 Zc3hc1 protein_coding unknown_likely_coding MGP_CBAJ_T0076331.1 MGP_CBAJ_G0030209.1 mouse_genomes_project 6 30151065 30153778 - Zc3hc1 protein_coding retained_intron MGP_CBAJ_T0076332.1 MGP_CBAJ_G0030209.1 mouse_genomes_project 6 30153719 30173597 - MGP_CBAJ_P0076332 Zc3hc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076333.1 MGP_CBAJ_G0030209.1 mouse_genomes_project 6 30155620 30163462 - Zc3hc1 protein_coding processed_transcript MGP_CBAJ_T0076334.1 MGP_CBAJ_G0030209.1 mouse_genomes_project 6 30156800 30173580 - MGP_CBAJ_P0076334 Zc3hc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076335.1 MGP_CBAJ_G0030209.1 mouse_genomes_project 6 30167456 30173601 - Zc3hc1 protein_coding retained_intron MGP_CBAJ_T0076336.1 MGP_CBAJ_G0030209.1 mouse_genomes_project 6 30170007 30173605 - Zc3hc1 protein_coding retained_intron MGP_CBAJ_T0018026.1 MGP_CBAJ_G0015380.1 mouse_genomes_project 6 71430034 71473383 + E230016M11Rik processed_transcript bidirectional_promoter_lncRNA MGP_CBAJ_T0018027.1 MGP_CBAJ_G0015380.1 mouse_genomes_project 6 71430040 71456490 + E230016M11Rik processed_transcript bidirectional_promoter_lncRNA MGP_CBAJ_T0018028.1 MGP_CBAJ_G0015380.1 mouse_genomes_project 6 71430090 71472868 + E230016M11Rik processed_transcript retained_intron MGP_CBAJ_T0018029.1 MGP_CBAJ_G0015380.1 mouse_genomes_project 6 71469488 71472826 + E230016M11Rik processed_transcript retained_intron MGP_CBAJ_T0015167.1 MGP_CBAJ_G0013279.1 mouse_genomes_project 6 69403499 69403833 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0079879.1 MGP_CBAJ_G0030972.1 mouse_genomes_project 6 138956826 138987953 + D6Wsu163e protein_coding retained_intron MGP_CBAJ_T0079880.1 MGP_CBAJ_G0030972.1 mouse_genomes_project 6 138956830 138997048 + MGP_CBAJ_P0079880 D6Wsu163e protein_coding protein_coding MGP_CBAJ_T0079881.1 MGP_CBAJ_G0030972.1 mouse_genomes_project 6 138956835 138962699 + D6Wsu163e protein_coding retained_intron MGP_CBAJ_T0079882.1 MGP_CBAJ_G0030972.1 mouse_genomes_project 6 138956839 138967567 + D6Wsu163e protein_coding retained_intron MGP_CBAJ_T0079883.1 MGP_CBAJ_G0030972.1 mouse_genomes_project 6 138956893 138964888 + MGP_CBAJ_P0079883 D6Wsu163e protein_coding protein_coding MGP_CBAJ_T0079884.1 MGP_CBAJ_G0030972.1 mouse_genomes_project 6 138970353 138975156 + D6Wsu163e protein_coding retained_intron MGP_CBAJ_T0079885.1 MGP_CBAJ_G0030972.1 mouse_genomes_project 6 138992705 138993900 + D6Wsu163e protein_coding retained_intron MGP_CBAJ_T0015229.1 MGP_CBAJ_G0013341.1 mouse_genomes_project 6 82241172 82241686 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0077483.1 MGP_CBAJ_G0030500.1 mouse_genomes_project 6 70223341 70224747 + MGP_CBAJ_P0077483 4930544G11Rik protein_coding protein_coding MGP_CBAJ_T0015183.1 MGP_CBAJ_G0013295.1 mouse_genomes_project 6 71405874 71406261 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0078193.1 MGP_CBAJ_G0030645.1 mouse_genomes_project 6 93933742 93983133 - MGP_CBAJ_P0078193 Gmcl1 protein_coding protein_coding MGP_CBAJ_T0078194.1 MGP_CBAJ_G0030645.1 mouse_genomes_project 6 93956190 93962563 - Gmcl1 protein_coding retained_intron MGP_CBAJ_T0078195.1 MGP_CBAJ_G0030645.1 mouse_genomes_project 6 93956274 93964004 - Gmcl1 protein_coding retained_intron MGP_CBAJ_T0078196.1 MGP_CBAJ_G0030645.1 mouse_genomes_project 6 93965608 93982990 - MGP_CBAJ_P0078196 Gmcl1 protein_coding protein_coding MGP_CBAJ_T0004863.1 MGP_CBAJ_G0004171.1 mouse_genomes_project 6 44641162 44642476 - Gm44731 antisense antisense MGP_CBAJ_T0002023.1 MGP_CBAJ_G0001939.1 mouse_genomes_project 6 94807933 94810569 + TEC TEC MGP_CBAJ_T0008683.1 MGP_CBAJ_G0007003.1 mouse_genomes_project 6 163952538 163963925 + Gm44115 lincRNA lincRNA MGP_CBAJ_T0079929.1 MGP_CBAJ_G0030984.1 mouse_genomes_project 6 140621151 140626966 - MGP_CBAJ_P0079929 protein_coding protein_coding MGP_CBAJ_T0079930.1 MGP_CBAJ_G0030984.1 mouse_genomes_project 6 140621511 140627022 - MGP_CBAJ_P0079930 protein_coding protein_coding MGP_CBAJ_T0079931.1 MGP_CBAJ_G0030984.1 mouse_genomes_project 6 140621516 140627022 - MGP_CBAJ_P0079931 protein_coding protein_coding MGP_CBAJ_T0079932.1 MGP_CBAJ_G0030984.1 mouse_genomes_project 6 140622122 140626732 - MGP_CBAJ_P0079932 protein_coding protein_coding MGP_CBAJ_T0079933.1 MGP_CBAJ_G0030984.1 mouse_genomes_project 6 140623375 140626849 - MGP_CBAJ_P0079933 protein_coding protein_coding MGP_CBAJ_T0079934.1 MGP_CBAJ_G0030984.1 mouse_genomes_project 6 140626033 140627065 - protein_coding processed_transcript MGP_CBAJ_T0079203.1 MGP_CBAJ_G0030842.1 mouse_genomes_project 6 128531570 128534910 + Zfp637 protein_coding retained_intron MGP_CBAJ_T0079204.1 MGP_CBAJ_G0030842.1 mouse_genomes_project 6 128531570 128535604 + MGP_CBAJ_P0079204 Zfp637 protein_coding protein_coding MGP_CBAJ_T0079205.1 MGP_CBAJ_G0030842.1 mouse_genomes_project 6 128531571 128535911 + MGP_CBAJ_P0079205 Zfp637 protein_coding protein_coding MGP_CBAJ_T0079206.1 MGP_CBAJ_G0030842.1 mouse_genomes_project 6 128531632 128536347 + MGP_CBAJ_P0079206 Zfp637 protein_coding protein_coding MGP_CBAJ_T0079207.1 MGP_CBAJ_G0030842.1 mouse_genomes_project 6 128531636 128536348 + MGP_CBAJ_P0079207 Zfp637 protein_coding protein_coding MGP_CBAJ_T0079208.1 MGP_CBAJ_G0030842.1 mouse_genomes_project 6 128531658 128535805 + MGP_CBAJ_P0079208 Zfp637 protein_coding protein_coding MGP_CBAJ_T0079209.1 MGP_CBAJ_G0030842.1 mouse_genomes_project 6 128531658 128535805 + MGP_CBAJ_P0079209 Zfp637 protein_coding protein_coding MGP_CBAJ_T0079210.1 MGP_CBAJ_G0030842.1 mouse_genomes_project 6 128531671 128536348 + MGP_CBAJ_P0079210 Zfp637 protein_coding protein_coding MGP_CBAJ_T0079211.1 MGP_CBAJ_G0030842.1 mouse_genomes_project 6 128531671 128535805 + MGP_CBAJ_P0079211 Zfp637 protein_coding protein_coding MGP_CBAJ_T0079212.1 MGP_CBAJ_G0030842.1 mouse_genomes_project 6 128533644 128535967 + Zfp637 protein_coding retained_intron MGP_CBAJ_T0100688.1 MGP_CBAJ_G0038943.1 mouse_genomes_project 6 101285287 101285417 + Gm22312 snoRNA snoRNA MGP_CBAJ_T0077841.1 MGP_CBAJ_G0030579.1 mouse_genomes_project 6 89753166 89762651 + MGP_CBAJ_P0077841 Dqx1 protein_coding protein_coding MGP_CBAJ_T0077842.1 MGP_CBAJ_G0030579.1 mouse_genomes_project 6 89753419 89755311 + MGP_CBAJ_P0077842 Dqx1 protein_coding non_stop_decay MGP_CBAJ_T0001903.1 MGP_CBAJ_G0001819.1 mouse_genomes_project 6 28313948 28317193 + TEC TEC MGP_CBAJ_T0010662.1 MGP_CBAJ_G0008800.1 mouse_genomes_project 6 95292948 95293076 - miRNA miRNA MGP_CBAJ_T0077302.1 MGP_CBAJ_G0030444.1 mouse_genomes_project 6 58796963 58958323 + MGP_CBAJ_P0077302 Ccdc129 protein_coding protein_coding MGP_CBAJ_T0077303.1 MGP_CBAJ_G0030444.1 mouse_genomes_project 6 58852101 58958436 + Ccdc129 protein_coding processed_transcript MGP_CBAJ_T0015055.1 MGP_CBAJ_G0013167.1 mouse_genomes_project 6 21583341 21584109 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008507.1 MGP_CBAJ_G0006867.1 mouse_genomes_project 6 58070812 58083779 + Gm43995 lincRNA lincRNA MGP_CBAJ_T0004983.1 MGP_CBAJ_G0004246.1 mouse_genomes_project 6 123972062 123973213 + Gm26982 antisense antisense MGP_CBAJ_T0076628.1 MGP_CBAJ_G0030263.1 mouse_genomes_project 6 39362813 39374412 - MGP_CBAJ_P0076628 Klrg2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076629.1 MGP_CBAJ_G0030263.1 mouse_genomes_project 6 39363780 39374412 - MGP_CBAJ_P0076629 Klrg2 protein_coding protein_coding MGP_CBAJ_T0076630.1 MGP_CBAJ_G0030263.1 mouse_genomes_project 6 39364381 39374421 - MGP_CBAJ_P0076630 Klrg2 protein_coding protein_coding MGP_CBAJ_T0077532.1 MGP_CBAJ_G0030515.1 mouse_genomes_project 6 71962628 71964363 - MGP_CBAJ_P0077532 Tacstd2 protein_coding protein_coding MGP_CBAJ_T0099434.1 MGP_CBAJ_G0037689.1 mouse_genomes_project 6 70128563 70128669 - Gm23543 snRNA snRNA MGP_CBAJ_T0078944.1 MGP_CBAJ_G0030793.1 mouse_genomes_project 6 123703206 123713241 + MGP_CBAJ_P0078944 Creld1 protein_coding protein_coding MGP_CBAJ_T0078945.1 MGP_CBAJ_G0030793.1 mouse_genomes_project 6 123703333 123709150 + Creld1 protein_coding retained_intron MGP_CBAJ_T0078946.1 MGP_CBAJ_G0030793.1 mouse_genomes_project 6 123703765 123708319 + Creld1 protein_coding retained_intron MGP_CBAJ_T0078947.1 MGP_CBAJ_G0030793.1 mouse_genomes_project 6 123707404 123709636 + Creld1 protein_coding retained_intron MGP_CBAJ_T0078948.1 MGP_CBAJ_G0030793.1 mouse_genomes_project 6 123711919 123713246 + Creld1 protein_coding retained_intron MGP_CBAJ_T0078949.1 MGP_CBAJ_G0030793.1 mouse_genomes_project 6 123711921 123713238 + Creld1 protein_coding retained_intron MGP_CBAJ_T0075734.1 MGP_CBAJ_G0030095.1 mouse_genomes_project 6 247990 362556 + MGP_CBAJ_P0075734 Vps50 protein_coding protein_coding MGP_CBAJ_T0075735.1 MGP_CBAJ_G0030095.1 mouse_genomes_project 6 248012 360135 + MGP_CBAJ_P0075735 Vps50 protein_coding protein_coding MGP_CBAJ_T0075736.1 MGP_CBAJ_G0030095.1 mouse_genomes_project 6 248030 362340 + MGP_CBAJ_P0075736 Vps50 protein_coding protein_coding MGP_CBAJ_T0075737.1 MGP_CBAJ_G0030095.1 mouse_genomes_project 6 248034 274956 + Vps50 protein_coding retained_intron MGP_CBAJ_T0075738.1 MGP_CBAJ_G0030095.1 mouse_genomes_project 6 269553 286357 + Vps50 protein_coding processed_transcript MGP_CBAJ_T0075739.1 MGP_CBAJ_G0030095.1 mouse_genomes_project 6 316965 362340 + Vps50 protein_coding retained_intron MGP_CBAJ_T0075740.1 MGP_CBAJ_G0030095.1 mouse_genomes_project 6 330960 362340 + Vps50 protein_coding processed_transcript MGP_CBAJ_T0075741.1 MGP_CBAJ_G0030095.1 mouse_genomes_project 6 344095 349102 + Vps50 protein_coding retained_intron MGP_CBAJ_T0075742.1 MGP_CBAJ_G0030095.1 mouse_genomes_project 6 350062 359287 + Vps50 protein_coding processed_transcript MGP_CBAJ_T0076118.1 MGP_CBAJ_G0030169.1 mouse_genomes_project 6 23553681 23604976 + MGP_CBAJ_P0076118 Asb15 protein_coding protein_coding MGP_CBAJ_T0076119.1 MGP_CBAJ_G0030169.1 mouse_genomes_project 6 23586629 23607156 + MGP_CBAJ_P0076119 Asb15 protein_coding protein_coding MGP_CBAJ_T0080226.1 MGP_CBAJ_G0031085.1 mouse_genomes_project 6 150175731 150238343 + MGP_CBAJ_P0080226 Atf7ip protein_coding protein_coding MGP_CBAJ_T0080227.1 MGP_CBAJ_G0031085.1 mouse_genomes_project 6 150188225 150284886 + MGP_CBAJ_P0080227 Atf7ip protein_coding protein_coding MGP_CBAJ_T0080228.1 MGP_CBAJ_G0031085.1 mouse_genomes_project 6 150188229 150235356 + MGP_CBAJ_P0080228 Atf7ip protein_coding protein_coding MGP_CBAJ_T0080229.1 MGP_CBAJ_G0031085.1 mouse_genomes_project 6 150188264 150257310 + MGP_CBAJ_P0080229 Atf7ip protein_coding protein_coding MGP_CBAJ_T0080230.1 MGP_CBAJ_G0031085.1 mouse_genomes_project 6 150188269 150193805 + Atf7ip protein_coding retained_intron MGP_CBAJ_T0080231.1 MGP_CBAJ_G0031085.1 mouse_genomes_project 6 150202528 150261581 + MGP_CBAJ_P0080231 Atf7ip protein_coding protein_coding MGP_CBAJ_T0080232.1 MGP_CBAJ_G0031085.1 mouse_genomes_project 6 150222746 150231470 + MGP_CBAJ_P0080232 Atf7ip protein_coding protein_coding MGP_CBAJ_T0080233.1 MGP_CBAJ_G0031085.1 mouse_genomes_project 6 150225572 150231653 + MGP_CBAJ_P0080233 Atf7ip protein_coding protein_coding MGP_CBAJ_T0080234.1 MGP_CBAJ_G0031085.1 mouse_genomes_project 6 150225590 150226786 + Atf7ip protein_coding retained_intron MGP_CBAJ_T0080235.1 MGP_CBAJ_G0031085.1 mouse_genomes_project 6 150232402 150242856 + MGP_CBAJ_P0080235 Atf7ip protein_coding protein_coding MGP_CBAJ_T0080236.1 MGP_CBAJ_G0031085.1 mouse_genomes_project 6 150249769 150257257 + Atf7ip protein_coding retained_intron MGP_CBAJ_T0080237.1 MGP_CBAJ_G0031085.1 mouse_genomes_project 6 150269406 150282331 + Atf7ip protein_coding retained_intron MGP_CBAJ_T0015386.1 MGP_CBAJ_G0013498.1 mouse_genomes_project 6 140998737 140998894 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010676.1 MGP_CBAJ_G0008814.1 mouse_genomes_project 6 125457182 125457277 + Gm24767 miRNA miRNA MGP_CBAJ_T0008542.1 MGP_CBAJ_G0006897.1 mouse_genomes_project 6 89558550 89562540 - 2310069B03Rik lincRNA lincRNA MGP_CBAJ_T0008543.1 MGP_CBAJ_G0006897.1 mouse_genomes_project 6 89559213 89562540 - 2310069B03Rik lincRNA lincRNA MGP_CBAJ_T0008544.1 MGP_CBAJ_G0006897.1 mouse_genomes_project 6 89560107 89562519 - 2310069B03Rik lincRNA lincRNA MGP_CBAJ_T0001999.1 MGP_CBAJ_G0001915.1 mouse_genomes_project 6 87232455 87235124 + TEC TEC MGP_CBAJ_T0008654.1 MGP_CBAJ_G0006983.1 mouse_genomes_project 6 155397845 155488292 + Gm30524 lincRNA lincRNA MGP_CBAJ_T0008655.1 MGP_CBAJ_G0006983.1 mouse_genomes_project 6 155397871 155486592 + Gm30524 lincRNA lincRNA MGP_CBAJ_T0079769.1 MGP_CBAJ_G0030949.1 mouse_genomes_project 6 136916926 136933398 + Iffo1 protein_coding retained_intron MGP_CBAJ_T0079770.1 MGP_CBAJ_G0030949.1 mouse_genomes_project 6 136916926 136933398 + MGP_CBAJ_P0079770 Iffo1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079771.1 MGP_CBAJ_G0030949.1 mouse_genomes_project 6 136916926 136933398 + MGP_CBAJ_P0079771 Iffo1 protein_coding protein_coding MGP_CBAJ_T0079772.1 MGP_CBAJ_G0030949.1 mouse_genomes_project 6 136916936 136933392 + MGP_CBAJ_P0079772 Iffo1 protein_coding protein_coding MGP_CBAJ_T0079773.1 MGP_CBAJ_G0030949.1 mouse_genomes_project 6 136916951 136933392 + Iffo1 protein_coding retained_intron MGP_CBAJ_T0079774.1 MGP_CBAJ_G0030949.1 mouse_genomes_project 6 136917486 136933392 + MGP_CBAJ_P0079774 Iffo1 protein_coding protein_coding MGP_CBAJ_T0079775.1 MGP_CBAJ_G0030949.1 mouse_genomes_project 6 136917711 136933392 + Iffo1 protein_coding retained_intron MGP_CBAJ_T0079776.1 MGP_CBAJ_G0030949.1 mouse_genomes_project 6 136920695 136923191 + Iffo1 protein_coding processed_transcript MGP_CBAJ_T0079777.1 MGP_CBAJ_G0030949.1 mouse_genomes_project 6 136921216 136924434 + Iffo1 protein_coding retained_intron MGP_CBAJ_T0079778.1 MGP_CBAJ_G0030949.1 mouse_genomes_project 6 136925051 136932673 + Iffo1 protein_coding retained_intron MGP_CBAJ_T0002666.1 MGP_CBAJ_G0002546.1 mouse_genomes_project 6 42187952 42188241 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0079199.1 MGP_CBAJ_G0030841.1 mouse_genomes_project 6 127802284 127808815 + MGP_CBAJ_P0079199 Cxcl12 protein_coding protein_coding MGP_CBAJ_T0079200.1 MGP_CBAJ_G0030841.1 mouse_genomes_project 6 127802323 127815112 + MGP_CBAJ_P0079200 Cxcl12 protein_coding protein_coding MGP_CBAJ_T0079201.1 MGP_CBAJ_G0030841.1 mouse_genomes_project 6 127802326 127809873 + Cxcl12 protein_coding retained_intron MGP_CBAJ_T0079202.1 MGP_CBAJ_G0030841.1 mouse_genomes_project 6 127802326 127815113 + MGP_CBAJ_P0079202 Cxcl12 protein_coding protein_coding MGP_CBAJ_T0008609.1 MGP_CBAJ_G0006948.1 mouse_genomes_project 6 128314191 128364368 - lincRNA lincRNA MGP_CBAJ_T0015022.1 MGP_CBAJ_G0013134.1 mouse_genomes_project 6 6411317 6411630 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0078560.1 MGP_CBAJ_G0030720.1 mouse_genomes_project 6 99600256 99701406 + MGP_CBAJ_P0078560 Fgd5 protein_coding protein_coding MGP_CBAJ_T0078561.1 MGP_CBAJ_G0030720.1 mouse_genomes_project 6 99694228 99702804 + Fgd5 protein_coding retained_intron MGP_CBAJ_T0078562.1 MGP_CBAJ_G0030720.1 mouse_genomes_project 6 99697987 99701015 + Fgd5 protein_coding retained_intron MGP_CBAJ_T0015114.1 MGP_CBAJ_G0013226.1 mouse_genomes_project 6 51110174 51111420 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015246.1 MGP_CBAJ_G0013358.1 mouse_genomes_project 6 91754771 91755779 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015412.1 MGP_CBAJ_G0013524.1 mouse_genomes_project 6 146091387 146091746 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008472.1 MGP_CBAJ_G0006841.1 mouse_genomes_project 6 42151274 42158486 + 5830405F06Rik lincRNA lincRNA MGP_CBAJ_T0008473.1 MGP_CBAJ_G0006841.1 mouse_genomes_project 6 42151275 42156528 + 5830405F06Rik lincRNA lincRNA MGP_CBAJ_T0076121.1 MGP_CBAJ_G0030171.1 mouse_genomes_project 6 23653621 23709779 - MGP_CBAJ_P0076121 Wasl protein_coding protein_coding MGP_CBAJ_T0076122.1 MGP_CBAJ_G0030171.1 mouse_genomes_project 6 23668714 23672590 - Wasl protein_coding retained_intron MGP_CBAJ_T0076123.1 MGP_CBAJ_G0030171.1 mouse_genomes_project 6 23677201 23709758 - MGP_CBAJ_P0076123 Wasl protein_coding protein_coding MGP_CBAJ_T0076124.1 MGP_CBAJ_G0030171.1 mouse_genomes_project 6 23682345 23709708 - Wasl protein_coding processed_transcript MGP_CBAJ_T0076855.1 MGP_CBAJ_G0030339.1 mouse_genomes_project 6 44231273 44232323 + MGP_CBAJ_P0076855 Olfr444 protein_coding protein_coding MGP_CBAJ_T0079213.1 MGP_CBAJ_G0030843.1 mouse_genomes_project 6 128557305 128567839 + Zfp239 protein_coding processed_transcript MGP_CBAJ_T0079214.1 MGP_CBAJ_G0030843.1 mouse_genomes_project 6 128558282 128567800 + Zfp239 protein_coding processed_transcript MGP_CBAJ_T0079215.1 MGP_CBAJ_G0030843.1 mouse_genomes_project 6 128558282 128570352 + MGP_CBAJ_P0079215 Zfp239 protein_coding protein_coding MGP_CBAJ_T0079216.1 MGP_CBAJ_G0030843.1 mouse_genomes_project 6 128558282 128569826 + MGP_CBAJ_P0079216 Zfp239 protein_coding protein_coding MGP_CBAJ_T0079217.1 MGP_CBAJ_G0030843.1 mouse_genomes_project 6 128558289 128564435 + Zfp239 protein_coding retained_intron MGP_CBAJ_T0079218.1 MGP_CBAJ_G0030843.1 mouse_genomes_project 6 128558289 128567795 + Zfp239 protein_coding processed_transcript MGP_CBAJ_T0079219.1 MGP_CBAJ_G0030843.1 mouse_genomes_project 6 128558289 128567528 + Zfp239 protein_coding processed_transcript MGP_CBAJ_T0002001.1 MGP_CBAJ_G0001917.1 mouse_genomes_project 6 88942696 88946848 - TEC TEC MGP_CBAJ_T0015358.1 MGP_CBAJ_G0013470.1 mouse_genomes_project 6 134260267 134261287 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000048.1 MGP_CBAJ_G0000038.1 mouse_genomes_project 6 75892202 75892244 + Igkj5 IG_J_gene processed_transcript MGP_CBAJ_T0000049.1 MGP_CBAJ_G0000038.1 mouse_genomes_project 6 75892202 75892240 + MGP_CBAJ_P0000049 Igkj5 IG_J_gene IG_J_gene MGP_CBAJ_T0010677.1 MGP_CBAJ_G0008815.1 mouse_genomes_project 6 126211362 126211425 + Mir7660 miRNA miRNA MGP_CBAJ_T0077484.1 MGP_CBAJ_G0030501.1 mouse_genomes_project 6 70884089 70902203 + MGP_CBAJ_P0077484 Mad2l1 protein_coding protein_coding MGP_CBAJ_T0077485.1 MGP_CBAJ_G0030501.1 mouse_genomes_project 6 70884124 70896003 + Mad2l1 protein_coding retained_intron MGP_CBAJ_T0077486.1 MGP_CBAJ_G0030501.1 mouse_genomes_project 6 70884167 70895974 + MGP_CBAJ_P0077486 Mad2l1 protein_coding protein_coding MGP_CBAJ_T0077487.1 MGP_CBAJ_G0030501.1 mouse_genomes_project 6 70884226 70892914 + MGP_CBAJ_P0077487 Mad2l1 protein_coding unknown_likely_coding MGP_CBAJ_T0077488.1 MGP_CBAJ_G0030501.1 mouse_genomes_project 6 70884377 70884773 + Mad2l1 protein_coding processed_transcript MGP_CBAJ_T0100650.1 MGP_CBAJ_G0038905.1 mouse_genomes_project 6 11936412 11936528 + Gm23760 snoRNA snoRNA MGP_CBAJ_T0000158.1 MGP_CBAJ_G0000120.1 mouse_genomes_project 6 73205801 73206580 + MGP_CBAJ_P0000158 Igkv1-99 IG_V_gene IG_V_gene MGP_CBAJ_T0000159.1 MGP_CBAJ_G0000120.1 mouse_genomes_project 6 73205815 73206580 + MGP_CBAJ_P0000159 Igkv1-99 IG_V_gene IG_V_gene MGP_CBAJ_T0011497.1 MGP_CBAJ_G0009635.1 mouse_genomes_project 6 15919527 15919636 + Gm27762 misc_RNA misc_RNA MGP_CBAJ_T0004892.1 MGP_CBAJ_G0004193.1 mouse_genomes_project 6 77352621 77355263 - Gm26628 antisense antisense MGP_CBAJ_T0004858.1 MGP_CBAJ_G0004167.1 mouse_genomes_project 6 41202484 41208413 - Gm26807 antisense antisense MGP_CBAJ_T0015225.1 MGP_CBAJ_G0013337.1 mouse_genomes_project 6 81052171 81053154 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0079406.1 MGP_CBAJ_G0030874.1 mouse_genomes_project 6 132023159 132051623 - MGP_CBAJ_P0079406 Bid protein_coding nonsense_mediated_decay MGP_CBAJ_T0079407.1 MGP_CBAJ_G0030874.1 mouse_genomes_project 6 132024083 132051640 - MGP_CBAJ_P0079407 Bid protein_coding protein_coding MGP_CBAJ_T0079408.1 MGP_CBAJ_G0030874.1 mouse_genomes_project 6 132026845 132028796 - Bid protein_coding retained_intron MGP_CBAJ_T0079409.1 MGP_CBAJ_G0030874.1 mouse_genomes_project 6 132031450 132051585 - MGP_CBAJ_P0079409 Bid protein_coding protein_coding MGP_CBAJ_T0079410.1 MGP_CBAJ_G0030874.1 mouse_genomes_project 6 132038248 132051590 - Bid protein_coding processed_transcript MGP_CBAJ_T0075964.1 MGP_CBAJ_G0030140.1 mouse_genomes_project 6 14951311 15025139 - MGP_CBAJ_P0075964 Tfec protein_coding nonsense_mediated_decay MGP_CBAJ_T0075965.1 MGP_CBAJ_G0030140.1 mouse_genomes_project 6 14951876 14985069 - MGP_CBAJ_P0075965 Tfec protein_coding protein_coding MGP_CBAJ_T0075966.1 MGP_CBAJ_G0030140.1 mouse_genomes_project 6 14952616 14953188 - MGP_CBAJ_P0075966 Tfec protein_coding protein_coding MGP_CBAJ_T0075967.1 MGP_CBAJ_G0030140.1 mouse_genomes_project 6 14959730 15025181 - Tfec protein_coding retained_intron MGP_CBAJ_T0075968.1 MGP_CBAJ_G0030140.1 mouse_genomes_project 6 14962511 14964311 - Tfec protein_coding retained_intron MGP_CBAJ_T0077286.1 MGP_CBAJ_G0030439.1 mouse_genomes_project 6 58122093 58244358 + MGP_CBAJ_P0077286 Fam188b protein_coding protein_coding MGP_CBAJ_T0077287.1 MGP_CBAJ_G0030439.1 mouse_genomes_project 6 58122093 58200767 + MGP_CBAJ_P0077287 Fam188b protein_coding protein_coding MGP_CBAJ_T0077288.1 MGP_CBAJ_G0030439.1 mouse_genomes_project 6 58200296 58242451 + Fam188b protein_coding processed_transcript MGP_CBAJ_T0076604.1 MGP_CBAJ_G0030260.1 mouse_genomes_project 6 39118270 39208220 + MGP_CBAJ_P0076604 protein_coding protein_coding MGP_CBAJ_T0076605.1 MGP_CBAJ_G0030260.1 mouse_genomes_project 6 39118493 39198289 + MGP_CBAJ_P0076605 protein_coding protein_coding MGP_CBAJ_T0076606.1 MGP_CBAJ_G0030260.1 mouse_genomes_project 6 39124812 39223842 + MGP_CBAJ_P0076606 protein_coding protein_coding MGP_CBAJ_T0076607.1 MGP_CBAJ_G0030260.1 mouse_genomes_project 6 39155804 39156584 + protein_coding retained_intron MGP_CBAJ_T0076608.1 MGP_CBAJ_G0030260.1 mouse_genomes_project 6 39156742 39180691 + protein_coding retained_intron MGP_CBAJ_T0076609.1 MGP_CBAJ_G0030260.1 mouse_genomes_project 6 39178983 39183291 + protein_coding retained_intron MGP_CBAJ_T0076610.1 MGP_CBAJ_G0030260.1 mouse_genomes_project 6 39179081 39184175 + protein_coding processed_transcript MGP_CBAJ_T0076611.1 MGP_CBAJ_G0030260.1 mouse_genomes_project 6 39179929 39198289 + protein_coding retained_intron MGP_CBAJ_T0076612.1 MGP_CBAJ_G0030260.1 mouse_genomes_project 6 39186715 39223876 + MGP_CBAJ_P0076612 protein_coding protein_coding MGP_CBAJ_T0098437.1 MGP_CBAJ_G0036699.1 mouse_genomes_project 6 90779169 90792662 + sense_intronic sense_intronic MGP_CBAJ_T0075814.1 MGP_CBAJ_G0030109.1 mouse_genomes_project 6 2354596 2409630 + MGP_CBAJ_P0075814 Asb4 protein_coding protein_coding MGP_CBAJ_T0075815.1 MGP_CBAJ_G0030109.1 mouse_genomes_project 6 2361481 2373288 + MGP_CBAJ_P0075815 Asb4 protein_coding protein_coding MGP_CBAJ_T0080114.1 MGP_CBAJ_G0031049.1 mouse_genomes_project 6 145856459 145857503 + MGP_CBAJ_P0080114 Tas2r102 protein_coding protein_coding MGP_CBAJ_T0004860.1 MGP_CBAJ_G0004169.1 mouse_genomes_project 6 43560507 43587063 - Gm44284 antisense antisense MGP_CBAJ_T0076753.1 MGP_CBAJ_G0030301.1 mouse_genomes_project 6 42745630 42748923 + MGP_CBAJ_P0076753 Prss2 protein_coding protein_coding MGP_CBAJ_T0079007.1 MGP_CBAJ_G0030806.1 mouse_genomes_project 6 124597456 124624631 + Slc6a1 protein_coding retained_intron MGP_CBAJ_T0079008.1 MGP_CBAJ_G0030806.1 mouse_genomes_project 6 124597456 124630045 + Slc6a1 protein_coding retained_intron MGP_CBAJ_T0079009.1 MGP_CBAJ_G0030806.1 mouse_genomes_project 6 124617541 124619470 + Slc6a1 protein_coding processed_transcript MGP_CBAJ_T0079010.1 MGP_CBAJ_G0030806.1 mouse_genomes_project 6 124618410 124638252 + MGP_CBAJ_P0079010 Slc6a1 protein_coding protein_coding MGP_CBAJ_T0079011.1 MGP_CBAJ_G0030806.1 mouse_genomes_project 6 124618762 124619470 + Slc6a1 protein_coding retained_intron MGP_CBAJ_T0079012.1 MGP_CBAJ_G0030806.1 mouse_genomes_project 6 124630801 124636324 + Slc6a1 protein_coding retained_intron MGP_CBAJ_T0008443.1 MGP_CBAJ_G0006824.1 mouse_genomes_project 6 31532222 31691059 + Gm43154 lincRNA lincRNA MGP_CBAJ_T0008444.1 MGP_CBAJ_G0006824.1 mouse_genomes_project 6 31532300 31691322 + Gm43154 lincRNA lincRNA MGP_CBAJ_T0008447.1 MGP_CBAJ_G0006824.1 mouse_genomes_project 6 31601592 31691324 + Gm43154 lincRNA lincRNA MGP_CBAJ_T0080021.1 MGP_CBAJ_G0031009.1 mouse_genomes_project 6 141952489 141968254 + MGP_CBAJ_P0080021 Clec9a protein_coding protein_coding MGP_CBAJ_T0080022.1 MGP_CBAJ_G0031009.1 mouse_genomes_project 6 141952490 141966060 + MGP_CBAJ_P0080022 Clec9a protein_coding protein_coding MGP_CBAJ_T0080023.1 MGP_CBAJ_G0031009.1 mouse_genomes_project 6 141952582 141965849 + MGP_CBAJ_P0080023 Clec9a protein_coding protein_coding MGP_CBAJ_T0080024.1 MGP_CBAJ_G0031009.1 mouse_genomes_project 6 141952582 141965849 + MGP_CBAJ_P0080024 Clec9a protein_coding protein_coding MGP_CBAJ_T0000141.1 MGP_CBAJ_G0000107.1 mouse_genomes_project 6 72461949 72462420 + MGP_CBAJ_P0000141 Igkv14-126 IG_V_gene IG_V_gene MGP_CBAJ_T0099436.1 MGP_CBAJ_G0037691.1 mouse_genomes_project 6 71420402 71420536 + Gm25260 snRNA snRNA MGP_CBAJ_T0080466.1 MGP_CBAJ_G0031136.1 mouse_genomes_project 6 157659801 157756789 - MGP_CBAJ_P0080466 C2cd5 protein_coding protein_coding MGP_CBAJ_T0080467.1 MGP_CBAJ_G0031136.1 mouse_genomes_project 6 157659801 157756789 - MGP_CBAJ_P0080467 C2cd5 protein_coding protein_coding MGP_CBAJ_T0080468.1 MGP_CBAJ_G0031136.1 mouse_genomes_project 6 157659806 157756772 - MGP_CBAJ_P0080468 C2cd5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080469.1 MGP_CBAJ_G0031136.1 mouse_genomes_project 6 157659809 157756460 - MGP_CBAJ_P0080469 C2cd5 protein_coding protein_coding MGP_CBAJ_T0080470.1 MGP_CBAJ_G0031136.1 mouse_genomes_project 6 157660363 157756451 - MGP_CBAJ_P0080470 C2cd5 protein_coding protein_coding MGP_CBAJ_T0080471.1 MGP_CBAJ_G0031136.1 mouse_genomes_project 6 157660614 157756753 - MGP_CBAJ_P0080471 C2cd5 protein_coding protein_coding MGP_CBAJ_T0080472.1 MGP_CBAJ_G0031136.1 mouse_genomes_project 6 157660620 157662594 - C2cd5 protein_coding retained_intron MGP_CBAJ_T0080473.1 MGP_CBAJ_G0031136.1 mouse_genomes_project 6 157660818 157756687 - MGP_CBAJ_P0080473 C2cd5 protein_coding protein_coding MGP_CBAJ_T0080474.1 MGP_CBAJ_G0031136.1 mouse_genomes_project 6 157666236 157669229 - C2cd5 protein_coding retained_intron MGP_CBAJ_T0080475.1 MGP_CBAJ_G0031136.1 mouse_genomes_project 6 157676665 157756789 - C2cd5 protein_coding retained_intron MGP_CBAJ_T0080476.1 MGP_CBAJ_G0031136.1 mouse_genomes_project 6 157693021 157723179 - MGP_CBAJ_P0080476 C2cd5 protein_coding protein_coding MGP_CBAJ_T0080477.1 MGP_CBAJ_G0031136.1 mouse_genomes_project 6 157700490 157703835 - C2cd5 protein_coding retained_intron MGP_CBAJ_T0080478.1 MGP_CBAJ_G0031136.1 mouse_genomes_project 6 157726669 157756533 - C2cd5 protein_coding retained_intron MGP_CBAJ_T0080479.1 MGP_CBAJ_G0031136.1 mouse_genomes_project 6 157728742 157737476 - C2cd5 protein_coding processed_transcript MGP_CBAJ_T0080480.1 MGP_CBAJ_G0031136.1 mouse_genomes_project 6 157734087 157736067 - C2cd5 protein_coding retained_intron MGP_CBAJ_T0080481.1 MGP_CBAJ_G0031136.1 mouse_genomes_project 6 157734454 157756823 - MGP_CBAJ_P0080481 C2cd5 protein_coding protein_coding MGP_CBAJ_T0080482.1 MGP_CBAJ_G0031136.1 mouse_genomes_project 6 157738906 157756760 - C2cd5 protein_coding retained_intron MGP_CBAJ_T0077074.1 MGP_CBAJ_G0030392.1 mouse_genomes_project 6 51533593 51559482 + MGP_CBAJ_P0077074 Ccdc126 protein_coding protein_coding MGP_CBAJ_T0077075.1 MGP_CBAJ_G0030392.1 mouse_genomes_project 6 51533626 51559478 + MGP_CBAJ_P0077075 Ccdc126 protein_coding protein_coding MGP_CBAJ_T0080212.1 MGP_CBAJ_G0031082.1 mouse_genomes_project 6 148844602 148865273 + MGP_CBAJ_P0080212 Emp1 protein_coding protein_coding MGP_CBAJ_T0080213.1 MGP_CBAJ_G0031082.1 mouse_genomes_project 6 148844992 148865273 + MGP_CBAJ_P0080213 Emp1 protein_coding protein_coding MGP_CBAJ_T0080214.1 MGP_CBAJ_G0031082.1 mouse_genomes_project 6 148844992 148865273 + MGP_CBAJ_P0080214 Emp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080215.1 MGP_CBAJ_G0031082.1 mouse_genomes_project 6 148845069 148862473 + Emp1 protein_coding retained_intron MGP_CBAJ_T0080216.1 MGP_CBAJ_G0031082.1 mouse_genomes_project 6 148845129 148847730 + Emp1 protein_coding retained_intron MGP_CBAJ_T0080217.1 MGP_CBAJ_G0031082.1 mouse_genomes_project 6 148849583 148865273 + MGP_CBAJ_P0080217 Emp1 protein_coding protein_coding MGP_CBAJ_T0004864.1 MGP_CBAJ_G0004172.1 mouse_genomes_project 6 44857416 44863739 + 9430018G01Rik antisense antisense MGP_CBAJ_T0080332.1 MGP_CBAJ_G0031105.1 mouse_genomes_project 6 152433695 152700082 - MGP_CBAJ_P0080332 Lmo3 protein_coding protein_coding MGP_CBAJ_T0080333.1 MGP_CBAJ_G0031105.1 mouse_genomes_project 6 152434973 152510021 - MGP_CBAJ_P0080333 Lmo3 protein_coding protein_coding MGP_CBAJ_T0080334.1 MGP_CBAJ_G0031105.1 mouse_genomes_project 6 152435739 152516362 - MGP_CBAJ_P0080334 Lmo3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080335.1 MGP_CBAJ_G0031105.1 mouse_genomes_project 6 152436368 152511565 - MGP_CBAJ_P0080335 Lmo3 protein_coding protein_coding MGP_CBAJ_T0080336.1 MGP_CBAJ_G0031105.1 mouse_genomes_project 6 152436372 152511508 - MGP_CBAJ_P0080336 Lmo3 protein_coding protein_coding MGP_CBAJ_T0080337.1 MGP_CBAJ_G0031105.1 mouse_genomes_project 6 152436679 152518968 - MGP_CBAJ_P0080337 Lmo3 protein_coding protein_coding MGP_CBAJ_T0080338.1 MGP_CBAJ_G0031105.1 mouse_genomes_project 6 152452625 152511590 - MGP_CBAJ_P0080338 Lmo3 protein_coding protein_coding MGP_CBAJ_T0080339.1 MGP_CBAJ_G0031105.1 mouse_genomes_project 6 152501988 152518622 - MGP_CBAJ_P0080339 Lmo3 protein_coding protein_coding MGP_CBAJ_T0015306.1 MGP_CBAJ_G0013418.1 mouse_genomes_project 6 117414937 117415549 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101162.1 MGP_CBAJ_G0039342.1 mouse_genomes_project 6 70574689 70596782 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101163.1 MGP_CBAJ_G0039342.1 mouse_genomes_project 6 70583044 70597888 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101164.1 MGP_CBAJ_G0039342.1 mouse_genomes_project 6 70596549 70597282 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0015064.1 MGP_CBAJ_G0013176.1 mouse_genomes_project 6 27848143 27849395 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0079816.1 MGP_CBAJ_G0030958.1 mouse_genomes_project 6 137110907 137120655 + MGP_CBAJ_P0079816 Scnn1a protein_coding protein_coding MGP_CBAJ_T0079817.1 MGP_CBAJ_G0030958.1 mouse_genomes_project 6 137110981 137137084 + MGP_CBAJ_P0079817 Scnn1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0079818.1 MGP_CBAJ_G0030958.1 mouse_genomes_project 6 137111223 137137307 + MGP_CBAJ_P0079818 Scnn1a protein_coding protein_coding MGP_CBAJ_T0079819.1 MGP_CBAJ_G0030958.1 mouse_genomes_project 6 137111583 137136783 + MGP_CBAJ_P0079819 Scnn1a protein_coding protein_coding MGP_CBAJ_T0015037.1 MGP_CBAJ_G0013149.1 mouse_genomes_project 6 14293539 14293786 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008418.1 MGP_CBAJ_G0006808.1 mouse_genomes_project 6 20566371 20573383 - Gm3289 lincRNA lincRNA MGP_CBAJ_T0002093.1 MGP_CBAJ_G0002009.1 mouse_genomes_project 6 128613215 128617814 - TEC TEC MGP_CBAJ_T0002094.1 MGP_CBAJ_G0002009.1 mouse_genomes_project 6 128617164 128617815 - TEC TEC MGP_CBAJ_T0008432.1 MGP_CBAJ_G0006818.1 mouse_genomes_project 6 30996656 31123806 - Lncpint lincRNA lincRNA MGP_CBAJ_T0008434.1 MGP_CBAJ_G0006818.1 mouse_genomes_project 6 31070823 31123765 - Lncpint lincRNA lincRNA MGP_CBAJ_T0008435.1 MGP_CBAJ_G0006818.1 mouse_genomes_project 6 31071776 31123752 - Lncpint lincRNA lincRNA MGP_CBAJ_T0008436.1 MGP_CBAJ_G0006818.1 mouse_genomes_project 6 31071824 31123678 - Lncpint lincRNA lincRNA MGP_CBAJ_T0008666.1 MGP_CBAJ_G0006990.1 mouse_genomes_project 6 158304619 158365191 - 1700060C16Rik lincRNA lincRNA MGP_CBAJ_T0076227.1 MGP_CBAJ_G0030195.1 mouse_genomes_project 6 28995246 28999090 - MGP_CBAJ_P0076227 Opn1sw protein_coding protein_coding MGP_CBAJ_T0076228.1 MGP_CBAJ_G0030195.1 mouse_genomes_project 6 28995959 28999008 - MGP_CBAJ_P0076228 Opn1sw protein_coding protein_coding MGP_CBAJ_T0076229.1 MGP_CBAJ_G0030195.1 mouse_genomes_project 6 28997507 28998990 - Opn1sw protein_coding processed_transcript MGP_CBAJ_T0076230.1 MGP_CBAJ_G0030195.1 mouse_genomes_project 6 28997949 29009014 - MGP_CBAJ_P0076230 Opn1sw protein_coding protein_coding MGP_CBAJ_T0018001.1 MGP_CBAJ_G0015372.1 mouse_genomes_project 6 54822865 54828266 + Hoxa11os processed_transcript antisense MGP_CBAJ_T0018002.1 MGP_CBAJ_G0015372.1 mouse_genomes_project 6 54823716 54828244 + Hoxa11os processed_transcript antisense MGP_CBAJ_T0018003.1 MGP_CBAJ_G0015372.1 mouse_genomes_project 6 54824443 54828270 + Hoxa11os processed_transcript antisense MGP_CBAJ_T0018004.1 MGP_CBAJ_G0015372.1 mouse_genomes_project 6 54824463 54828265 + Hoxa11os processed_transcript antisense MGP_CBAJ_T0018005.1 MGP_CBAJ_G0015372.1 mouse_genomes_project 6 54824695 54827855 + Hoxa11os processed_transcript retained_intron MGP_CBAJ_T0018006.1 MGP_CBAJ_G0015372.1 mouse_genomes_project 6 54826896 54828274 + Hoxa11os processed_transcript antisense MGP_CBAJ_T0078450.1 MGP_CBAJ_G0030702.1 mouse_genomes_project 6 97857355 97872939 + MGP_CBAJ_P0078450 Zxdc protein_coding protein_coding MGP_CBAJ_T0078451.1 MGP_CBAJ_G0030702.1 mouse_genomes_project 6 97857357 97891329 + MGP_CBAJ_P0078451 Zxdc protein_coding protein_coding MGP_CBAJ_T0078452.1 MGP_CBAJ_G0030702.1 mouse_genomes_project 6 97857471 97872070 + MGP_CBAJ_P0078452 Zxdc protein_coding protein_coding MGP_CBAJ_T0078453.1 MGP_CBAJ_G0030702.1 mouse_genomes_project 6 97857476 97870958 + MGP_CBAJ_P0078453 Zxdc protein_coding protein_coding MGP_CBAJ_T0078454.1 MGP_CBAJ_G0030702.1 mouse_genomes_project 6 97857481 97862415 + Zxdc protein_coding retained_intron MGP_CBAJ_T0010659.1 MGP_CBAJ_G0008797.1 mouse_genomes_project 6 92746055 92746150 - Mir6375 miRNA miRNA MGP_CBAJ_T0078133.1 MGP_CBAJ_G0030635.1 mouse_genomes_project 6 93562565 93572414 + MGP_CBAJ_P0078133 Fam136a protein_coding protein_coding MGP_CBAJ_T0078134.1 MGP_CBAJ_G0030635.1 mouse_genomes_project 6 93562633 93563939 + Fam136a protein_coding retained_intron MGP_CBAJ_T0078135.1 MGP_CBAJ_G0030635.1 mouse_genomes_project 6 93562643 93571154 + MGP_CBAJ_P0078135 Fam136a protein_coding nonsense_mediated_decay MGP_CBAJ_T0080053.1 MGP_CBAJ_G0031017.1 mouse_genomes_project 6 142203920 142208158 - MGP_CBAJ_P0080053 Klrc3 protein_coding protein_coding MGP_CBAJ_T0080054.1 MGP_CBAJ_G0031017.1 mouse_genomes_project 6 142203920 142208158 - MGP_CBAJ_P0080054 Klrc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080055.1 MGP_CBAJ_G0031017.1 mouse_genomes_project 6 142203941 142208158 - MGP_CBAJ_P0080055 Klrc3 protein_coding protein_coding MGP_CBAJ_T0001998.1 MGP_CBAJ_G0001914.1 mouse_genomes_project 6 86878077 86880794 + TEC TEC MGP_CBAJ_T0011506.1 MGP_CBAJ_G0009644.1 mouse_genomes_project 6 29877962 29878289 - Gm25580 misc_RNA misc_RNA MGP_CBAJ_T0001954.1 MGP_CBAJ_G0001870.1 mouse_genomes_project 6 57789403 57792711 + TEC TEC MGP_CBAJ_T0015208.1 MGP_CBAJ_G0013320.1 mouse_genomes_project 6 75386940 75391722 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000166.1 MGP_CBAJ_G0000125.1 mouse_genomes_project 6 73443495 73443963 - MGP_CBAJ_P0000166 Igkv19-93 IG_V_gene IG_V_gene MGP_CBAJ_T0000167.1 MGP_CBAJ_G0000125.1 mouse_genomes_project 6 73443495 73443979 - MGP_CBAJ_P0000167 Igkv19-93 IG_V_gene IG_V_gene MGP_CBAJ_T0000298.1 MGP_CBAJ_G0000243.1 mouse_genomes_project 6 75082822 75083378 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0015048.1 MGP_CBAJ_G0013160.1 mouse_genomes_project 6 18246265 18248075 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011549.1 MGP_CBAJ_G0009687.1 mouse_genomes_project 6 160193552 160193882 - Gm22793 misc_RNA misc_RNA MGP_CBAJ_T0102016.1 MGP_CBAJ_G0040047.1 mouse_genomes_project 6 97496005 97496177 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0000206.1 MGP_CBAJ_G0000154.1 mouse_genomes_project 6 75851099 75851688 + MGP_CBAJ_P0000206 Igkv3-3 IG_V_gene IG_V_gene MGP_CBAJ_T0077439.1 MGP_CBAJ_G0030492.1 mouse_genomes_project 6 67207810 67266606 + Grid2 protein_coding processed_transcript MGP_CBAJ_T0077440.1 MGP_CBAJ_G0030492.1 mouse_genomes_project 6 67207940 68244442 + Grid2 protein_coding processed_transcript MGP_CBAJ_T0077441.1 MGP_CBAJ_G0030492.1 mouse_genomes_project 6 67207961 68764503 + MGP_CBAJ_P0077441 Grid2 protein_coding protein_coding MGP_CBAJ_T0077442.1 MGP_CBAJ_G0030492.1 mouse_genomes_project 6 67208129 67489042 + Grid2 protein_coding retained_intron MGP_CBAJ_T0077443.1 MGP_CBAJ_G0030492.1 mouse_genomes_project 6 67208760 68342285 + Grid2 protein_coding retained_intron MGP_CBAJ_T0077444.1 MGP_CBAJ_G0030492.1 mouse_genomes_project 6 68131491 68155175 + Grid2 protein_coding retained_intron MGP_CBAJ_T0008442.1 MGP_CBAJ_G0006823.1 mouse_genomes_project 6 31500049 31501806 + Gm6117 lincRNA lincRNA MGP_CBAJ_T0079186.1 MGP_CBAJ_G0030837.1 mouse_genomes_project 6 127136064 127137158 - MGP_CBAJ_P0079186 Olfr215 protein_coding protein_coding MGP_CBAJ_T0015406.1 MGP_CBAJ_G0013518.1 mouse_genomes_project 6 145465985 145466459 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005035.1 MGP_CBAJ_G0004292.1 mouse_genomes_project 6 158768081 158769952 + Sox5os1 antisense antisense MGP_CBAJ_T0015307.1 MGP_CBAJ_G0013419.1 mouse_genomes_project 6 117416321 117416810 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011515.1 MGP_CBAJ_G0009653.1 mouse_genomes_project 6 54730742 54730844 + Gm27868 misc_RNA misc_RNA MGP_CBAJ_T0078742.1 MGP_CBAJ_G0030759.1 mouse_genomes_project 6 114957491 115140772 + Cntn4 protein_coding processed_transcript MGP_CBAJ_T0078743.1 MGP_CBAJ_G0030759.1 mouse_genomes_project 6 114957576 116079178 + MGP_CBAJ_P0078743 Cntn4 protein_coding protein_coding MGP_CBAJ_T0078744.1 MGP_CBAJ_G0030759.1 mouse_genomes_project 6 114957576 116107323 + MGP_CBAJ_P0078744 Cntn4 protein_coding protein_coding MGP_CBAJ_T0078745.1 MGP_CBAJ_G0030759.1 mouse_genomes_project 6 114957606 116107328 + MGP_CBAJ_P0078745 Cntn4 protein_coding protein_coding MGP_CBAJ_T0078746.1 MGP_CBAJ_G0030759.1 mouse_genomes_project 6 115238984 116079184 + MGP_CBAJ_P0078746 Cntn4 protein_coding protein_coding MGP_CBAJ_T0078747.1 MGP_CBAJ_G0030759.1 mouse_genomes_project 6 115460973 116010224 + MGP_CBAJ_P0078747 Cntn4 protein_coding protein_coding MGP_CBAJ_T0078748.1 MGP_CBAJ_G0030759.1 mouse_genomes_project 6 115461126 115909210 + Cntn4 protein_coding processed_transcript MGP_CBAJ_T0078749.1 MGP_CBAJ_G0030759.1 mouse_genomes_project 6 115461214 116078401 + MGP_CBAJ_P0078749 Cntn4 protein_coding protein_coding MGP_CBAJ_T0078750.1 MGP_CBAJ_G0030759.1 mouse_genomes_project 6 115461263 115714694 + Cntn4 protein_coding processed_transcript MGP_CBAJ_T0078751.1 MGP_CBAJ_G0030759.1 mouse_genomes_project 6 115897244 116105776 + Cntn4 protein_coding processed_transcript MGP_CBAJ_T0078752.1 MGP_CBAJ_G0030759.1 mouse_genomes_project 6 116059146 116107210 + Cntn4 protein_coding processed_transcript MGP_CBAJ_T0078753.1 MGP_CBAJ_G0030759.1 mouse_genomes_project 6 116084124 116085098 + Cntn4 protein_coding retained_intron MGP_CBAJ_T0078754.1 MGP_CBAJ_G0030759.1 mouse_genomes_project 6 116100139 116105920 + Cntn4 protein_coding processed_transcript MGP_CBAJ_T0078109.1 MGP_CBAJ_G0030631.1 mouse_genomes_project 6 93083653 93106608 - MGP_CBAJ_P0078109 Dusp11 protein_coding protein_coding MGP_CBAJ_T0078110.1 MGP_CBAJ_G0030631.1 mouse_genomes_project 6 93089133 93104244 - MGP_CBAJ_P0078110 Dusp11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078111.1 MGP_CBAJ_G0030631.1 mouse_genomes_project 6 93092052 93093226 - Dusp11 protein_coding retained_intron MGP_CBAJ_T0078112.1 MGP_CBAJ_G0030631.1 mouse_genomes_project 6 93092057 93096285 - Dusp11 protein_coding processed_transcript MGP_CBAJ_T0078113.1 MGP_CBAJ_G0030631.1 mouse_genomes_project 6 93092380 93096169 - Dusp11 protein_coding retained_intron MGP_CBAJ_T0078114.1 MGP_CBAJ_G0030631.1 mouse_genomes_project 6 93097304 93106608 - Dusp11 protein_coding processed_transcript MGP_CBAJ_T0078115.1 MGP_CBAJ_G0030631.1 mouse_genomes_project 6 93097406 93106548 - Dusp11 protein_coding processed_transcript MGP_CBAJ_T0078116.1 MGP_CBAJ_G0030631.1 mouse_genomes_project 6 93105259 93106583 - Dusp11 protein_coding retained_intron MGP_CBAJ_T0077560.1 MGP_CBAJ_G0030525.1 mouse_genomes_project 6 76666455 76676852 + Cd8a protein_coding retained_intron MGP_CBAJ_T0077561.1 MGP_CBAJ_G0030525.1 mouse_genomes_project 6 76666460 76676156 + MGP_CBAJ_P0077561 Cd8a protein_coding protein_coding MGP_CBAJ_T0015331.1 MGP_CBAJ_G0013443.1 mouse_genomes_project 6 125513455 125514289 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008455.1 MGP_CBAJ_G0006834.1 mouse_genomes_project 6 34857217 34859736 - Gm13861 lincRNA lincRNA MGP_CBAJ_T0078281.1 MGP_CBAJ_G0030664.1 mouse_genomes_project 6 95150669 95159163 - MGP_CBAJ_P0078281 Cnbp protein_coding protein_coding MGP_CBAJ_T0078282.1 MGP_CBAJ_G0030664.1 mouse_genomes_project 6 95150669 95159163 - MGP_CBAJ_P0078282 Cnbp protein_coding protein_coding MGP_CBAJ_T0078283.1 MGP_CBAJ_G0030664.1 mouse_genomes_project 6 95151136 95159137 - MGP_CBAJ_P0078283 Cnbp protein_coding protein_coding MGP_CBAJ_T0078284.1 MGP_CBAJ_G0030664.1 mouse_genomes_project 6 95151136 95159087 - MGP_CBAJ_P0078284 Cnbp protein_coding protein_coding MGP_CBAJ_T0078285.1 MGP_CBAJ_G0030664.1 mouse_genomes_project 6 95151941 95159117 - MGP_CBAJ_P0078285 Cnbp protein_coding protein_coding MGP_CBAJ_T0078286.1 MGP_CBAJ_G0030664.1 mouse_genomes_project 6 95151973 95159084 - Cnbp protein_coding retained_intron MGP_CBAJ_T0078287.1 MGP_CBAJ_G0030664.1 mouse_genomes_project 6 95151993 95159079 - Cnbp protein_coding retained_intron MGP_CBAJ_T0078288.1 MGP_CBAJ_G0030664.1 mouse_genomes_project 6 95152054 95159116 - Cnbp protein_coding retained_intron MGP_CBAJ_T0078289.1 MGP_CBAJ_G0030664.1 mouse_genomes_project 6 95153584 95154372 - Cnbp protein_coding retained_intron MGP_CBAJ_T0011521.1 MGP_CBAJ_G0009659.1 mouse_genomes_project 6 54826806 54827010 + Gm27454 misc_RNA misc_RNA MGP_CBAJ_T0015057.1 MGP_CBAJ_G0013169.1 mouse_genomes_project 6 21652280 21652983 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008416.1 MGP_CBAJ_G0006806.1 mouse_genomes_project 6 15545712 15546320 + Gm29591 lincRNA lincRNA MGP_CBAJ_T0077665.1 MGP_CBAJ_G0030542.1 mouse_genomes_project 6 77880457 77883814 - MGP_CBAJ_P0077665 Vamp5 protein_coding protein_coding MGP_CBAJ_T0077666.1 MGP_CBAJ_G0030542.1 mouse_genomes_project 6 77880676 77896195 - MGP_CBAJ_P0077666 Vamp5 protein_coding protein_coding MGP_CBAJ_T0077667.1 MGP_CBAJ_G0030542.1 mouse_genomes_project 6 77880682 77896241 - MGP_CBAJ_P0077667 Vamp5 protein_coding protein_coding MGP_CBAJ_T0015360.1 MGP_CBAJ_G0013472.1 mouse_genomes_project 6 134693568 134693662 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008395.1 MGP_CBAJ_G0006792.1 mouse_genomes_project 6 3635384 3661084 + Gm20685 lincRNA lincRNA MGP_CBAJ_T0015004.1 MGP_CBAJ_G0013116.1 mouse_genomes_project 6 1056599 1056846 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0079694.1 MGP_CBAJ_G0030938.1 mouse_genomes_project 6 136634457 136642035 - MGP_CBAJ_P0079694 Lag3 protein_coding protein_coding MGP_CBAJ_T0079695.1 MGP_CBAJ_G0030938.1 mouse_genomes_project 6 136638588 136640041 - Lag3 protein_coding processed_transcript MGP_CBAJ_T0076663.1 MGP_CBAJ_G0030270.1 mouse_genomes_project 6 40204606 40218451 + MGP_CBAJ_P0076663 Rab19 protein_coding protein_coding MGP_CBAJ_T0008605.1 MGP_CBAJ_G0006946.1 mouse_genomes_project 6 128240271 128248772 + Gm9946 lincRNA lincRNA MGP_CBAJ_T0008606.1 MGP_CBAJ_G0006946.1 mouse_genomes_project 6 128240271 128252908 + Gm9946 lincRNA lincRNA MGP_CBAJ_T0008607.1 MGP_CBAJ_G0006946.1 mouse_genomes_project 6 128248250 128248634 + Gm9946 lincRNA lincRNA MGP_CBAJ_T0008577.1 MGP_CBAJ_G0006923.1 mouse_genomes_project 6 106874064 106894928 - Gm44197 lincRNA lincRNA MGP_CBAJ_T0080100.1 MGP_CBAJ_G0031036.1 mouse_genomes_project 6 144603745 144604835 - MGP_CBAJ_P0080100 Tas2r130 protein_coding protein_coding MGP_CBAJ_T0077753.1 MGP_CBAJ_G0030560.1 mouse_genomes_project 6 84520697 84523689 - MGP_CBAJ_P0077753 Reg3d protein_coding protein_coding MGP_CBAJ_T0077754.1 MGP_CBAJ_G0030560.1 mouse_genomes_project 6 84520697 84523689 - MGP_CBAJ_P0077754 Reg3d protein_coding protein_coding MGP_CBAJ_T0077755.1 MGP_CBAJ_G0030560.1 mouse_genomes_project 6 84520747 84523337 - MGP_CBAJ_P0077755 Reg3d protein_coding protein_coding MGP_CBAJ_T0015244.1 MGP_CBAJ_G0013356.1 mouse_genomes_project 6 90656526 90657292 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002097.1 MGP_CBAJ_G0002012.1 mouse_genomes_project 6 132047658 132049748 - TEC TEC MGP_CBAJ_T0079852.1 MGP_CBAJ_G0030966.1 mouse_genomes_project 6 138604426 138608825 - MGP_CBAJ_P0079852 Kcna1 protein_coding protein_coding MGP_CBAJ_T0079853.1 MGP_CBAJ_G0030966.1 mouse_genomes_project 6 138605693 138608842 - MGP_CBAJ_P0079853 Kcna1 protein_coding protein_coding MGP_CBAJ_T0079854.1 MGP_CBAJ_G0030966.1 mouse_genomes_project 6 138607803 138610412 - Kcna1 protein_coding processed_transcript MGP_CBAJ_T0001923.1 MGP_CBAJ_G0001839.1 mouse_genomes_project 6 46623586 46627335 + TEC TEC MGP_CBAJ_T0099461.1 MGP_CBAJ_G0037716.1 mouse_genomes_project 6 137778392 137778502 + Gm24947 snRNA snRNA MGP_CBAJ_T0075810.1 MGP_CBAJ_G0030108.1 mouse_genomes_project 6 2209510 2248059 - MGP_CBAJ_P0075810 Pon2 protein_coding protein_coding MGP_CBAJ_T0075811.1 MGP_CBAJ_G0030108.1 mouse_genomes_project 6 2215516 2247934 - Pon2 protein_coding retained_intron MGP_CBAJ_T0075812.1 MGP_CBAJ_G0030108.1 mouse_genomes_project 6 2218451 2234364 - Pon2 protein_coding processed_transcript MGP_CBAJ_T0075813.1 MGP_CBAJ_G0030108.1 mouse_genomes_project 6 2222848 2225686 - Pon2 protein_coding retained_intron MGP_CBAJ_T0004853.1 MGP_CBAJ_G0004163.1 mouse_genomes_project 6 39899424 39936556 + 4930599N23Rik antisense antisense MGP_CBAJ_T0076104.1 MGP_CBAJ_G0030163.1 mouse_genomes_project 6 22614788 22616225 - MGP_CBAJ_P0076104 Rnf133 protein_coding protein_coding MGP_CBAJ_T0076105.1 MGP_CBAJ_G0030163.1 mouse_genomes_project 6 22614793 22616126 - MGP_CBAJ_P0076105 Rnf133 protein_coding protein_coding MGP_CBAJ_T0079005.1 MGP_CBAJ_G0030805.1 mouse_genomes_project 6 124444866 124564815 + MGP_CBAJ_P0079005 Slc6a11 protein_coding protein_coding MGP_CBAJ_T0079006.1 MGP_CBAJ_G0030805.1 mouse_genomes_project 6 124445044 124446061 + Slc6a11 protein_coding retained_intron MGP_CBAJ_T0004888.1 MGP_CBAJ_G0004189.1 mouse_genomes_project 6 70021673 70032379 - Gm16838 antisense antisense MGP_CBAJ_T0008493.1 MGP_CBAJ_G0006858.1 mouse_genomes_project 6 53874786 53876040 - 0610033M10Rik lincRNA lincRNA MGP_CBAJ_T0008494.1 MGP_CBAJ_G0006858.1 mouse_genomes_project 6 53875025 53875854 - 0610033M10Rik lincRNA lincRNA MGP_CBAJ_T0002520.1 MGP_CBAJ_G0002425.1 mouse_genomes_project 6 42758455 42758503 + MGP_CBAJ_P0002520 Trbj1-2 TR_J_gene TR_J_gene MGP_CBAJ_T0099442.1 MGP_CBAJ_G0037697.1 mouse_genomes_project 6 101622743 101622849 + Gm23035 snRNA snRNA MGP_CBAJ_T0098447.1 MGP_CBAJ_G0036709.1 mouse_genomes_project 6 148296219 148298643 - Gm44366 sense_intronic sense_intronic MGP_CBAJ_T0002063.1 MGP_CBAJ_G0001979.1 mouse_genomes_project 6 108876344 108877452 - TEC TEC MGP_CBAJ_T0015098.1 MGP_CBAJ_G0013210.1 mouse_genomes_project 6 45269858 45270617 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0080245.1 MGP_CBAJ_G0031089.1 mouse_genomes_project 6 150540001 150541834 + MGP_CBAJ_P0080245 H2afj protein_coding protein_coding MGP_CBAJ_T0080246.1 MGP_CBAJ_G0031089.1 mouse_genomes_project 6 150540090 150541548 + MGP_CBAJ_P0080246 H2afj protein_coding protein_coding MGP_CBAJ_T0076402.1 MGP_CBAJ_G0030221.1 mouse_genomes_project 6 30852794 30855848 - MGP_CBAJ_P0076402 Klf14 protein_coding protein_coding MGP_CBAJ_T0015047.1 MGP_CBAJ_G0013159.1 mouse_genomes_project 6 17765035 17766982 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0077957.1 MGP_CBAJ_G0030602.1 mouse_genomes_project 6 90457701 90464344 - MGP_CBAJ_P0077957 Cd207 protein_coding protein_coding MGP_CBAJ_T0100664.1 MGP_CBAJ_G0038919.1 mouse_genomes_project 6 52911629 52911760 - Gm26289 snoRNA snoRNA MGP_CBAJ_T0015366.1 MGP_CBAJ_G0013478.1 mouse_genomes_project 6 136901007 136906476 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0077718.1 MGP_CBAJ_G0030552.1 mouse_genomes_project 6 78434248 78504432 - MGP_CBAJ_P0077718 Kcmf1 protein_coding protein_coding MGP_CBAJ_T0077719.1 MGP_CBAJ_G0030552.1 mouse_genomes_project 6 78434364 78504506 - MGP_CBAJ_P0077719 Kcmf1 protein_coding protein_coding MGP_CBAJ_T0077720.1 MGP_CBAJ_G0030552.1 mouse_genomes_project 6 78437747 78440791 - Kcmf1 protein_coding retained_intron MGP_CBAJ_T0077721.1 MGP_CBAJ_G0030552.1 mouse_genomes_project 6 78439613 78453145 - Kcmf1 protein_coding processed_transcript MGP_CBAJ_T0015351.1 MGP_CBAJ_G0013463.1 mouse_genomes_project 6 133208227 133208359 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0075872.1 MGP_CBAJ_G0030125.1 mouse_genomes_project 6 5747000 5847160 + MGP_CBAJ_P0075872 Glcci1 protein_coding protein_coding MGP_CBAJ_T0075873.1 MGP_CBAJ_G0030125.1 mouse_genomes_project 6 5749598 5847163 + MGP_CBAJ_P0075873 Glcci1 protein_coding protein_coding MGP_CBAJ_T0075874.1 MGP_CBAJ_G0030125.1 mouse_genomes_project 6 5750938 5826837 + MGP_CBAJ_P0075874 Glcci1 protein_coding protein_coding MGP_CBAJ_T0075875.1 MGP_CBAJ_G0030125.1 mouse_genomes_project 6 5761567 5843125 + MGP_CBAJ_P0075875 Glcci1 protein_coding protein_coding MGP_CBAJ_T0075876.1 MGP_CBAJ_G0030125.1 mouse_genomes_project 6 5787955 5843683 + MGP_CBAJ_P0075876 Glcci1 protein_coding protein_coding MGP_CBAJ_T0075877.1 MGP_CBAJ_G0030125.1 mouse_genomes_project 6 5826894 5841243 + Glcci1 protein_coding processed_transcript MGP_CBAJ_T0002154.1 MGP_CBAJ_G0002069.1 mouse_genomes_project 6 164955248 164965038 + TEC TEC MGP_CBAJ_T0001985.1 MGP_CBAJ_G0001901.1 mouse_genomes_project 6 83497798 83502630 - TEC TEC MGP_CBAJ_T0100666.1 MGP_CBAJ_G0038921.1 mouse_genomes_project 6 56632830 56632962 - Gm22910 snoRNA snoRNA MGP_CBAJ_T0002674.1 MGP_CBAJ_G0002554.1 mouse_genomes_project 6 42394652 42394916 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0080125.1 MGP_CBAJ_G0031060.1 mouse_genomes_project 6 146154344 146155272 - MGP_CBAJ_P0080125 Tas2r103 protein_coding protein_coding MGP_CBAJ_T0010689.1 MGP_CBAJ_G0008827.1 mouse_genomes_project 6 137011221 137011350 - Mir8113 miRNA miRNA MGP_CBAJ_T0008625.1 MGP_CBAJ_G0006964.1 mouse_genomes_project 6 139771139 139784794 + Gm43634 lincRNA lincRNA MGP_CBAJ_T0080318.1 MGP_CBAJ_G0031103.1 mouse_genomes_project 6 152000968 152068176 - MGP_CBAJ_P0080318 Slc15a5 protein_coding protein_coding MGP_CBAJ_T0080319.1 MGP_CBAJ_G0031103.1 mouse_genomes_project 6 152000972 152097109 - Slc15a5 protein_coding retained_intron MGP_CBAJ_T0080320.1 MGP_CBAJ_G0031103.1 mouse_genomes_project 6 152000972 152106913 - MGP_CBAJ_P0080320 Slc15a5 protein_coding protein_coding MGP_CBAJ_T0080321.1 MGP_CBAJ_G0031103.1 mouse_genomes_project 6 152045400 152059504 - MGP_CBAJ_P0080321 Slc15a5 protein_coding protein_coding MGP_CBAJ_T0080322.1 MGP_CBAJ_G0031103.1 mouse_genomes_project 6 152055882 152068246 - MGP_CBAJ_P0080322 Slc15a5 protein_coding protein_coding MGP_CBAJ_T0080323.1 MGP_CBAJ_G0031103.1 mouse_genomes_project 6 152059677 152080813 - Slc15a5 protein_coding retained_intron MGP_CBAJ_T0078563.1 MGP_CBAJ_G0030721.1 mouse_genomes_project 6 99719318 99797746 + MGP_CBAJ_P0078563 Nr2c2 protein_coding protein_coding MGP_CBAJ_T0078564.1 MGP_CBAJ_G0030721.1 mouse_genomes_project 6 99720361 99794429 + MGP_CBAJ_P0078564 Nr2c2 protein_coding protein_coding MGP_CBAJ_T0078565.1 MGP_CBAJ_G0030721.1 mouse_genomes_project 6 99763302 99765437 + MGP_CBAJ_P0078565 Nr2c2 protein_coding protein_coding MGP_CBAJ_T0078566.1 MGP_CBAJ_G0030721.1 mouse_genomes_project 6 99763903 99767838 + Nr2c2 protein_coding retained_intron MGP_CBAJ_T0078567.1 MGP_CBAJ_G0030721.1 mouse_genomes_project 6 99765400 99795392 + MGP_CBAJ_P0078567 Nr2c2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078568.1 MGP_CBAJ_G0030721.1 mouse_genomes_project 6 99772388 99783272 + Nr2c2 protein_coding processed_transcript MGP_CBAJ_T0078569.1 MGP_CBAJ_G0030721.1 mouse_genomes_project 6 99783731 99785578 + Nr2c2 protein_coding retained_intron MGP_CBAJ_T0078570.1 MGP_CBAJ_G0030721.1 mouse_genomes_project 6 99790927 99801583 + Nr2c2 protein_coding processed_transcript MGP_CBAJ_T0078542.1 MGP_CBAJ_G0030717.1 mouse_genomes_project 6 99362191 99397772 - MGP_CBAJ_P0078542 Grip2 protein_coding unknown_likely_coding MGP_CBAJ_T0078543.1 MGP_CBAJ_G0030717.1 mouse_genomes_project 6 99362195 99408989 - MGP_CBAJ_P0078543 Grip2 protein_coding protein_coding MGP_CBAJ_T0078544.1 MGP_CBAJ_G0030717.1 mouse_genomes_project 6 99362195 99431459 - MGP_CBAJ_P0078544 Grip2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078545.1 MGP_CBAJ_G0030717.1 mouse_genomes_project 6 99364134 99408851 - MGP_CBAJ_P0078545 Grip2 protein_coding protein_coding MGP_CBAJ_T0078546.1 MGP_CBAJ_G0030717.1 mouse_genomes_project 6 99385198 99408926 - MGP_CBAJ_P0078546 Grip2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078547.1 MGP_CBAJ_G0030717.1 mouse_genomes_project 6 99386259 99397777 - MGP_CBAJ_P0078547 Grip2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078548.1 MGP_CBAJ_G0030717.1 mouse_genomes_project 6 99394238 99397793 - Grip2 protein_coding retained_intron MGP_CBAJ_T0010658.1 MGP_CBAJ_G0008796.1 mouse_genomes_project 6 92371590 92371672 - Mir705 miRNA miRNA MGP_CBAJ_T0077591.1 MGP_CBAJ_G0030531.1 mouse_genomes_project 6 77196234 77206481 - MGP_CBAJ_P0077591 Mrpl35 protein_coding protein_coding MGP_CBAJ_T0077592.1 MGP_CBAJ_G0030531.1 mouse_genomes_project 6 77198777 77206434 - MGP_CBAJ_P0077592 Mrpl35 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077593.1 MGP_CBAJ_G0030531.1 mouse_genomes_project 6 77200301 77209660 - Mrpl35 protein_coding processed_transcript MGP_CBAJ_T0015391.1 MGP_CBAJ_G0013503.1 mouse_genomes_project 6 142239868 142240470 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001908.1 MGP_CBAJ_G0001824.1 mouse_genomes_project 6 31050453 31052745 - TEC TEC MGP_CBAJ_T0076883.1 MGP_CBAJ_G0030350.1 mouse_genomes_project 6 46598111 49192571 + MGP_CBAJ_P0076883 Cntnap2 protein_coding protein_coding MGP_CBAJ_T0076884.1 MGP_CBAJ_G0030350.1 mouse_genomes_project 6 47838908 48137277 + Cntnap2 protein_coding processed_transcript MGP_CBAJ_T0076885.1 MGP_CBAJ_G0030350.1 mouse_genomes_project 6 48845212 48912940 + MGP_CBAJ_P0076885 Cntnap2 protein_coding protein_coding MGP_CBAJ_T0076886.1 MGP_CBAJ_G0030350.1 mouse_genomes_project 6 49122034 49192567 + MGP_CBAJ_P0076886 Cntnap2 protein_coding protein_coding MGP_CBAJ_T0076887.1 MGP_CBAJ_G0030350.1 mouse_genomes_project 6 49122100 49188058 + MGP_CBAJ_P0076887 Cntnap2 protein_coding protein_coding MGP_CBAJ_T0080259.1 MGP_CBAJ_G0031093.1 mouse_genomes_project 6 150627338 150637328 - MGP_CBAJ_P0080259 Art4 protein_coding protein_coding MGP_CBAJ_T0077493.1 MGP_CBAJ_G0030506.1 mouse_genomes_project 6 70986502 70987512 - MGP_CBAJ_P0077493 protein_coding protein_coding MGP_CBAJ_T0075831.1 MGP_CBAJ_G0030113.1 mouse_genomes_project 6 3714949 3736399 - MGP_CBAJ_P0075831 Shfm1 protein_coding protein_coding MGP_CBAJ_T0075832.1 MGP_CBAJ_G0030113.1 mouse_genomes_project 6 3734183 3736404 - Shfm1 protein_coding retained_intron MGP_CBAJ_T0076134.1 MGP_CBAJ_G0030176.1 mouse_genomes_project 6 24011736 24016893 - MGP_CBAJ_P0076134 Tmem229a protein_coding protein_coding MGP_CBAJ_T0002531.1 MGP_CBAJ_G0002434.1 mouse_genomes_project 6 42772564 42772613 + MGP_CBAJ_P0002531 Trbj2-4 TR_J_gene TR_J_gene MGP_CBAJ_T0002018.1 MGP_CBAJ_G0001934.1 mouse_genomes_project 6 94422482 94424785 - TEC TEC MGP_CBAJ_T0000196.1 MGP_CBAJ_G0000146.1 mouse_genomes_project 6 75053111 75053691 - MGP_CBAJ_P0000196 Igkv6-32 IG_V_gene IG_V_gene MGP_CBAJ_T0077143.1 MGP_CBAJ_G0030405.1 mouse_genomes_project 6 54381522 54548460 - MGP_CBAJ_P0077143 Skap2 protein_coding protein_coding MGP_CBAJ_T0077144.1 MGP_CBAJ_G0030405.1 mouse_genomes_project 6 54383204 54400430 - Skap2 protein_coding processed_transcript MGP_CBAJ_T0077145.1 MGP_CBAJ_G0030405.1 mouse_genomes_project 6 54383266 54548426 - MGP_CBAJ_P0077145 Skap2 protein_coding protein_coding MGP_CBAJ_T0077146.1 MGP_CBAJ_G0030405.1 mouse_genomes_project 6 54384156 54437256 - MGP_CBAJ_P0077146 Skap2 protein_coding protein_coding MGP_CBAJ_T0077147.1 MGP_CBAJ_G0030405.1 mouse_genomes_project 6 54397846 54401171 - Skap2 protein_coding retained_intron MGP_CBAJ_T0077148.1 MGP_CBAJ_G0030405.1 mouse_genomes_project 6 54402972 54464491 - Skap2 protein_coding processed_transcript MGP_CBAJ_T0077149.1 MGP_CBAJ_G0030405.1 mouse_genomes_project 6 54526448 54548443 - Skap2 protein_coding retained_intron MGP_CBAJ_T0078095.1 MGP_CBAJ_G0030630.1 mouse_genomes_project 6 93042862 93046143 + Tprkb protein_coding processed_transcript MGP_CBAJ_T0078096.1 MGP_CBAJ_G0030630.1 mouse_genomes_project 6 93042874 93064340 + MGP_CBAJ_P0078096 Tprkb protein_coding protein_coding MGP_CBAJ_T0078097.1 MGP_CBAJ_G0030630.1 mouse_genomes_project 6 93042888 93046529 + Tprkb protein_coding processed_transcript MGP_CBAJ_T0078098.1 MGP_CBAJ_G0030630.1 mouse_genomes_project 6 93042904 93059784 + Tprkb protein_coding processed_transcript MGP_CBAJ_T0078099.1 MGP_CBAJ_G0030630.1 mouse_genomes_project 6 93044999 93046963 + Tprkb protein_coding retained_intron MGP_CBAJ_T0078100.1 MGP_CBAJ_G0030630.1 mouse_genomes_project 6 93046636 93063015 + MGP_CBAJ_P0078100 Tprkb protein_coding protein_coding MGP_CBAJ_T0078101.1 MGP_CBAJ_G0030630.1 mouse_genomes_project 6 93046655 93065691 + MGP_CBAJ_P0078101 Tprkb protein_coding protein_coding MGP_CBAJ_T0078102.1 MGP_CBAJ_G0030630.1 mouse_genomes_project 6 93046655 93063502 + MGP_CBAJ_P0078102 Tprkb protein_coding protein_coding MGP_CBAJ_T0078103.1 MGP_CBAJ_G0030630.1 mouse_genomes_project 6 93046664 93065689 + MGP_CBAJ_P0078103 Tprkb protein_coding protein_coding MGP_CBAJ_T0078104.1 MGP_CBAJ_G0030630.1 mouse_genomes_project 6 93046664 93063927 + MGP_CBAJ_P0078104 Tprkb protein_coding protein_coding MGP_CBAJ_T0078105.1 MGP_CBAJ_G0030630.1 mouse_genomes_project 6 93046672 93064432 + MGP_CBAJ_P0078105 Tprkb protein_coding protein_coding MGP_CBAJ_T0078106.1 MGP_CBAJ_G0030630.1 mouse_genomes_project 6 93046673 93060023 + Tprkb protein_coding processed_transcript MGP_CBAJ_T0078107.1 MGP_CBAJ_G0030630.1 mouse_genomes_project 6 93046674 93063298 + MGP_CBAJ_P0078107 Tprkb protein_coding protein_coding MGP_CBAJ_T0078108.1 MGP_CBAJ_G0030630.1 mouse_genomes_project 6 93046715 93063347 + MGP_CBAJ_P0078108 Tprkb protein_coding protein_coding MGP_CBAJ_T0078807.1 MGP_CBAJ_G0030771.1 mouse_genomes_project 6 122344723 122403016 + MGP_CBAJ_P0078807 Lmcd1 protein_coding protein_coding MGP_CBAJ_T0002036.1 MGP_CBAJ_G0001952.1 mouse_genomes_project 6 96175867 96179627 + TEC TEC MGP_CBAJ_T0080195.1 MGP_CBAJ_G0031076.1 mouse_genomes_project 6 148507213 148530909 + MGP_CBAJ_P0080195 Gprc5a protein_coding protein_coding MGP_CBAJ_T0100718.1 MGP_CBAJ_G0038973.1 mouse_genomes_project 6 164252177 164252299 + Gm25539 snoRNA snoRNA MGP_CBAJ_T0098213.1 MGP_CBAJ_G0036486.1 mouse_genomes_project 6 55688796 55688935 - Gm26215 scaRNA scaRNA MGP_CBAJ_T0005042.1 MGP_CBAJ_G0004298.1 mouse_genomes_project 6 159925009 159928489 + Gm15687 antisense antisense MGP_CBAJ_T0011532.1 MGP_CBAJ_G0009670.1 mouse_genomes_project 6 92044071 92044326 + Gm26353 misc_RNA misc_RNA MGP_CBAJ_T0077235.1 MGP_CBAJ_G0030428.1 mouse_genomes_project 6 57242198 57324377 + MGP_CBAJ_P0077235 Wipf3 protein_coding protein_coding MGP_CBAJ_T0077236.1 MGP_CBAJ_G0030428.1 mouse_genomes_project 6 57242198 57324377 + MGP_CBAJ_P0077236 Wipf3 protein_coding protein_coding MGP_CBAJ_T0077237.1 MGP_CBAJ_G0030428.1 mouse_genomes_project 6 57268338 57324380 + MGP_CBAJ_P0077237 Wipf3 protein_coding protein_coding MGP_CBAJ_T0077238.1 MGP_CBAJ_G0030428.1 mouse_genomes_project 6 57268338 57324380 + MGP_CBAJ_P0077238 Wipf3 protein_coding protein_coding MGP_CBAJ_T0077239.1 MGP_CBAJ_G0030428.1 mouse_genomes_project 6 57290357 57303838 + Wipf3 protein_coding processed_transcript MGP_CBAJ_T0077240.1 MGP_CBAJ_G0030428.1 mouse_genomes_project 6 57308519 57312155 + Wipf3 protein_coding retained_intron MGP_CBAJ_T0001925.1 MGP_CBAJ_G0001841.1 mouse_genomes_project 6 46758686 46761228 + TEC TEC MGP_CBAJ_T0076337.1 MGP_CBAJ_G0030210.1 mouse_genomes_project 6 30186220 30249333 + MGP_CBAJ_P0076337 Klhdc10 protein_coding protein_coding MGP_CBAJ_T0076338.1 MGP_CBAJ_G0030210.1 mouse_genomes_project 6 30186346 30251229 + MGP_CBAJ_P0076338 Klhdc10 protein_coding protein_coding MGP_CBAJ_T0076339.1 MGP_CBAJ_G0030210.1 mouse_genomes_project 6 30186350 30246607 + MGP_CBAJ_P0076339 Klhdc10 protein_coding protein_coding MGP_CBAJ_T0076340.1 MGP_CBAJ_G0030210.1 mouse_genomes_project 6 30207100 30243492 + MGP_CBAJ_P0076340 Klhdc10 protein_coding protein_coding MGP_CBAJ_T0076341.1 MGP_CBAJ_G0030210.1 mouse_genomes_project 6 30239742 30246886 + Klhdc10 protein_coding retained_intron MGP_CBAJ_T0077548.1 MGP_CBAJ_G0030521.1 mouse_genomes_project 6 76465578 76470788 + MGP_CBAJ_P0077548 Fabp1 protein_coding protein_coding MGP_CBAJ_T0008656.1 MGP_CBAJ_G0006984.1 mouse_genomes_project 6 156383198 156392901 + Gm44244 lincRNA lincRNA MGP_CBAJ_T0015156.1 MGP_CBAJ_G0013268.1 mouse_genomes_project 6 66740908 66741434 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011492.1 MGP_CBAJ_G0009630.1 mouse_genomes_project 6 3969552 3969759 + Gm27905 misc_RNA misc_RNA MGP_CBAJ_T0008660.1 MGP_CBAJ_G0006988.1 mouse_genomes_project 6 157926086 157929311 + D6Ertd474e lincRNA lincRNA MGP_CBAJ_T0008661.1 MGP_CBAJ_G0006988.1 mouse_genomes_project 6 157926086 157982407 + D6Ertd474e lincRNA lincRNA MGP_CBAJ_T0008662.1 MGP_CBAJ_G0006988.1 mouse_genomes_project 6 157926091 157983971 + D6Ertd474e lincRNA lincRNA MGP_CBAJ_T0008663.1 MGP_CBAJ_G0006988.1 mouse_genomes_project 6 157926091 157982772 + D6Ertd474e lincRNA lincRNA MGP_CBAJ_T0008664.1 MGP_CBAJ_G0006988.1 mouse_genomes_project 6 157970535 157982736 + D6Ertd474e lincRNA lincRNA MGP_CBAJ_T0076927.1 MGP_CBAJ_G0030359.1 mouse_genomes_project 6 49999873 50023760 - MGP_CBAJ_P0076927 Zfp777 protein_coding protein_coding MGP_CBAJ_T0076928.1 MGP_CBAJ_G0030359.1 mouse_genomes_project 6 50000016 50023657 - MGP_CBAJ_P0076928 Zfp777 protein_coding unknown_likely_coding MGP_CBAJ_T0076929.1 MGP_CBAJ_G0030359.1 mouse_genomes_project 6 50005055 50019875 - MGP_CBAJ_P0076929 Zfp777 protein_coding protein_coding MGP_CBAJ_T0076930.1 MGP_CBAJ_G0030359.1 mouse_genomes_project 6 50019794 50023760 - MGP_CBAJ_P0076930 Zfp777 protein_coding protein_coding MGP_CBAJ_T0076931.1 MGP_CBAJ_G0030359.1 mouse_genomes_project 6 50020076 50023423 - MGP_CBAJ_P0076931 Zfp777 protein_coding protein_coding MGP_CBAJ_T0077394.1 MGP_CBAJ_G0030483.1 mouse_genomes_project 6 62053743 62119429 + MGP_CBAJ_P0077394 Abcg2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077395.1 MGP_CBAJ_G0030483.1 mouse_genomes_project 6 62053747 62119071 + MGP_CBAJ_P0077395 Abcg2 protein_coding protein_coding MGP_CBAJ_T0077396.1 MGP_CBAJ_G0030483.1 mouse_genomes_project 6 62076377 62077715 + Abcg2 protein_coding retained_intron MGP_CBAJ_T0077397.1 MGP_CBAJ_G0030483.1 mouse_genomes_project 6 62076582 62124221 + MGP_CBAJ_P0077397 Abcg2 protein_coding protein_coding MGP_CBAJ_T0077398.1 MGP_CBAJ_G0030483.1 mouse_genomes_project 6 62095179 62118935 + MGP_CBAJ_P0077398 Abcg2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077399.1 MGP_CBAJ_G0030483.1 mouse_genomes_project 6 62098057 62105637 + Abcg2 protein_coding retained_intron MGP_CBAJ_T0079383.1 MGP_CBAJ_G0030869.1 mouse_genomes_project 6 131592455 131618085 - MGP_CBAJ_P0079383 Cecr5 protein_coding protein_coding MGP_CBAJ_T0079384.1 MGP_CBAJ_G0030869.1 mouse_genomes_project 6 131606654 131618070 - Cecr5 protein_coding retained_intron MGP_CBAJ_T0079385.1 MGP_CBAJ_G0030869.1 mouse_genomes_project 6 131607533 131618056 - Cecr5 protein_coding retained_intron MGP_CBAJ_T0079386.1 MGP_CBAJ_G0030869.1 mouse_genomes_project 6 131616733 131618068 - Cecr5 protein_coding retained_intron MGP_CBAJ_T0015303.1 MGP_CBAJ_G0013415.1 mouse_genomes_project 6 116536873 116537327 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0080379.1 MGP_CBAJ_G0031113.1 mouse_genomes_project 6 154991613 155057476 + MGP_CBAJ_P0080379 Aebp2 protein_coding protein_coding MGP_CBAJ_T0080380.1 MGP_CBAJ_G0031113.1 mouse_genomes_project 6 154991619 155032023 + MGP_CBAJ_P0080380 Aebp2 protein_coding protein_coding MGP_CBAJ_T0080381.1 MGP_CBAJ_G0031113.1 mouse_genomes_project 6 154992222 155056411 + MGP_CBAJ_P0080381 Aebp2 protein_coding protein_coding MGP_CBAJ_T0080382.1 MGP_CBAJ_G0031113.1 mouse_genomes_project 6 154992833 155028468 + MGP_CBAJ_P0080382 Aebp2 protein_coding protein_coding MGP_CBAJ_T0080383.1 MGP_CBAJ_G0031113.1 mouse_genomes_project 6 154994806 155029550 + MGP_CBAJ_P0080383 Aebp2 protein_coding protein_coding MGP_CBAJ_T0080384.1 MGP_CBAJ_G0031113.1 mouse_genomes_project 6 155008243 155009674 + Aebp2 protein_coding retained_intron MGP_CBAJ_T0080385.1 MGP_CBAJ_G0031113.1 mouse_genomes_project 6 155009257 155031142 + MGP_CBAJ_P0080385 Aebp2 protein_coding protein_coding MGP_CBAJ_T0080386.1 MGP_CBAJ_G0031113.1 mouse_genomes_project 6 155016345 155028754 + Aebp2 protein_coding processed_transcript MGP_CBAJ_T0080387.1 MGP_CBAJ_G0031113.1 mouse_genomes_project 6 155023372 155024946 + Aebp2 protein_coding processed_transcript MGP_CBAJ_T0079820.1 MGP_CBAJ_G0030959.1 mouse_genomes_project 6 137142074 137142755 + Tnfrsf1a protein_coding processed_transcript MGP_CBAJ_T0079821.1 MGP_CBAJ_G0030959.1 mouse_genomes_project 6 137142170 137152802 + MGP_CBAJ_P0079821 Tnfrsf1a protein_coding protein_coding MGP_CBAJ_T0079822.1 MGP_CBAJ_G0030959.1 mouse_genomes_project 6 137142442 137157982 + MGP_CBAJ_P0079822 Tnfrsf1a protein_coding protein_coding MGP_CBAJ_T0079823.1 MGP_CBAJ_G0030959.1 mouse_genomes_project 6 137152856 137156602 + MGP_CBAJ_P0079823 Tnfrsf1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0079824.1 MGP_CBAJ_G0030959.1 mouse_genomes_project 6 137153256 137157275 + MGP_CBAJ_P0079824 Tnfrsf1a protein_coding protein_coding MGP_CBAJ_T0079825.1 MGP_CBAJ_G0030959.1 mouse_genomes_project 6 137155923 137157371 + Tnfrsf1a protein_coding retained_intron MGP_CBAJ_T0078034.1 MGP_CBAJ_G0030613.1 mouse_genomes_project 6 92096129 92124139 - MGP_CBAJ_P0078034 Gm5878 protein_coding protein_coding MGP_CBAJ_T0076189.1 MGP_CBAJ_G0030188.1 mouse_genomes_project 6 28688241 28730933 - MGP_CBAJ_P0076189 Rbm28 protein_coding unknown_likely_coding MGP_CBAJ_T0076190.1 MGP_CBAJ_G0030188.1 mouse_genomes_project 6 28688251 28731287 - MGP_CBAJ_P0076190 Rbm28 protein_coding protein_coding MGP_CBAJ_T0076191.1 MGP_CBAJ_G0030188.1 mouse_genomes_project 6 28689812 28721322 - Rbm28 protein_coding retained_intron MGP_CBAJ_T0076192.1 MGP_CBAJ_G0030188.1 mouse_genomes_project 6 28689846 28695908 - MGP_CBAJ_P0076192 Rbm28 protein_coding protein_coding MGP_CBAJ_T0076193.1 MGP_CBAJ_G0030188.1 mouse_genomes_project 6 28692279 28730933 - MGP_CBAJ_P0076193 Rbm28 protein_coding unknown_likely_coding MGP_CBAJ_T0076194.1 MGP_CBAJ_G0030188.1 mouse_genomes_project 6 28702032 28719081 - Rbm28 protein_coding retained_intron MGP_CBAJ_T0076195.1 MGP_CBAJ_G0030188.1 mouse_genomes_project 6 28722910 28726437 - Rbm28 protein_coding retained_intron MGP_CBAJ_T0076196.1 MGP_CBAJ_G0030188.1 mouse_genomes_project 6 28723370 28726212 - Rbm28 protein_coding retained_intron MGP_CBAJ_T0008459.1 MGP_CBAJ_G0006836.1 mouse_genomes_project 6 35655449 35661426 + 1700065J11Rik lincRNA lincRNA MGP_CBAJ_T0015326.1 MGP_CBAJ_G0013438.1 mouse_genomes_project 6 124482379 124483019 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0079799.1 MGP_CBAJ_G0030953.1 mouse_genomes_project 6 136992178 136998938 + MGP_CBAJ_P0079799 Vamp1 protein_coding protein_coding MGP_CBAJ_T0079800.1 MGP_CBAJ_G0030953.1 mouse_genomes_project 6 136992208 136998795 + MGP_CBAJ_P0079800 Vamp1 protein_coding protein_coding MGP_CBAJ_T0079801.1 MGP_CBAJ_G0030953.1 mouse_genomes_project 6 136992208 137017771 + MGP_CBAJ_P0079801 Vamp1 protein_coding protein_coding MGP_CBAJ_T0079802.1 MGP_CBAJ_G0030953.1 mouse_genomes_project 6 136995208 136998287 + MGP_CBAJ_P0079802 Vamp1 protein_coding protein_coding MGP_CBAJ_T0079804.1 MGP_CBAJ_G0030953.1 mouse_genomes_project 6 137007847 137022954 + Vamp1 protein_coding processed_transcript MGP_CBAJ_T0079805.1 MGP_CBAJ_G0030953.1 mouse_genomes_project 6 137007847 137016456 + Vamp1 protein_coding processed_transcript MGP_CBAJ_T0002132.1 MGP_CBAJ_G0002047.1 mouse_genomes_project 6 154607956 154608950 - TEC TEC MGP_CBAJ_T0001928.1 MGP_CBAJ_G0001844.1 mouse_genomes_project 6 46875240 46876645 + TEC TEC MGP_CBAJ_T0002030.1 MGP_CBAJ_G0001946.1 mouse_genomes_project 6 95364655 95369021 - TEC TEC MGP_CBAJ_T0000261.1 MGP_CBAJ_G0000206.1 mouse_genomes_project 6 72407196 72407662 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0015252.1 MGP_CBAJ_G0013364.1 mouse_genomes_project 6 92096406 92096983 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101984.1 MGP_CBAJ_G0040015.1 mouse_genomes_project 6 44416832 44417148 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0080705.1 MGP_CBAJ_G0031172.1 mouse_genomes_project 6 164450625 164455089 + MGP_CBAJ_P0080705 Mettl20 protein_coding protein_coding MGP_CBAJ_T0080706.1 MGP_CBAJ_G0031172.1 mouse_genomes_project 6 164452289 164462687 + MGP_CBAJ_P0080706 Mettl20 protein_coding protein_coding MGP_CBAJ_T0080707.1 MGP_CBAJ_G0031172.1 mouse_genomes_project 6 164452289 164462682 + MGP_CBAJ_P0080707 Mettl20 protein_coding protein_coding MGP_CBAJ_T0080708.1 MGP_CBAJ_G0031172.1 mouse_genomes_project 6 164452292 164455935 + MGP_CBAJ_P0080708 Mettl20 protein_coding protein_coding MGP_CBAJ_T0080709.1 MGP_CBAJ_G0031172.1 mouse_genomes_project 6 164452330 164455935 + MGP_CBAJ_P0080709 Mettl20 protein_coding protein_coding MGP_CBAJ_T0080710.1 MGP_CBAJ_G0031172.1 mouse_genomes_project 6 164452340 164461914 + MGP_CBAJ_P0080710 Mettl20 protein_coding protein_coding MGP_CBAJ_T0080711.1 MGP_CBAJ_G0031172.1 mouse_genomes_project 6 164452350 164462687 + MGP_CBAJ_P0080711 Mettl20 protein_coding protein_coding MGP_CBAJ_T0080712.1 MGP_CBAJ_G0031172.1 mouse_genomes_project 6 164452414 164461929 + MGP_CBAJ_P0080712 Mettl20 protein_coding protein_coding MGP_CBAJ_T0080713.1 MGP_CBAJ_G0031172.1 mouse_genomes_project 6 164452422 164462687 + MGP_CBAJ_P0080713 Mettl20 protein_coding protein_coding MGP_CBAJ_T0018007.1 MGP_CBAJ_G0015373.1 mouse_genomes_project 6 56749082 56789179 + 4921529L05Rik processed_transcript processed_transcript MGP_CBAJ_T0018008.1 MGP_CBAJ_G0015373.1 mouse_genomes_project 6 56749092 56752186 + 4921529L05Rik processed_transcript processed_transcript MGP_CBAJ_T0018009.1 MGP_CBAJ_G0015373.1 mouse_genomes_project 6 56749120 56782335 + 4921529L05Rik processed_transcript processed_transcript MGP_CBAJ_T0018010.1 MGP_CBAJ_G0015373.1 mouse_genomes_project 6 56782260 56789824 + 4921529L05Rik processed_transcript processed_transcript MGP_CBAJ_T0078436.1 MGP_CBAJ_G0030692.1 mouse_genomes_project 6 97508211 97509144 - MGP_CBAJ_P0078436 Vmn1r49 protein_coding protein_coding MGP_CBAJ_T0078437.1 MGP_CBAJ_G0030692.1 mouse_genomes_project 6 97508211 97514586 - MGP_CBAJ_P0078437 Vmn1r49 protein_coding protein_coding MGP_CBAJ_T0078631.1 MGP_CBAJ_G0030736.1 mouse_genomes_project 6 104237670 104239417 - MGP_CBAJ_P0078631 1700123L14Rik protein_coding protein_coding MGP_CBAJ_T0002107.1 MGP_CBAJ_G0002022.1 mouse_genomes_project 6 139910295 139912573 - TEC TEC MGP_CBAJ_T0078119.1 MGP_CBAJ_G0030633.1 mouse_genomes_project 6 93186313 93260261 + Add2 protein_coding retained_intron MGP_CBAJ_T0078120.1 MGP_CBAJ_G0030633.1 mouse_genomes_project 6 93186336 93287516 + MGP_CBAJ_P0078120 Add2 protein_coding protein_coding MGP_CBAJ_T0078121.1 MGP_CBAJ_G0030633.1 mouse_genomes_project 6 93186379 93272595 + MGP_CBAJ_P0078121 Add2 protein_coding protein_coding MGP_CBAJ_T0078122.1 MGP_CBAJ_G0030633.1 mouse_genomes_project 6 93212927 93256537 + MGP_CBAJ_P0078122 Add2 protein_coding protein_coding MGP_CBAJ_T0078123.1 MGP_CBAJ_G0030633.1 mouse_genomes_project 6 93241121 93282675 + MGP_CBAJ_P0078123 Add2 protein_coding protein_coding MGP_CBAJ_T0078124.1 MGP_CBAJ_G0030633.1 mouse_genomes_project 6 93241121 93272593 + MGP_CBAJ_P0078124 Add2 protein_coding protein_coding MGP_CBAJ_T0078125.1 MGP_CBAJ_G0030633.1 mouse_genomes_project 6 93241148 93282675 + MGP_CBAJ_P0078125 Add2 protein_coding protein_coding MGP_CBAJ_T0078126.1 MGP_CBAJ_G0030633.1 mouse_genomes_project 6 93245869 93281946 + MGP_CBAJ_P0078126 Add2 protein_coding protein_coding MGP_CBAJ_T0078127.1 MGP_CBAJ_G0030633.1 mouse_genomes_project 6 93245869 93271424 + MGP_CBAJ_P0078127 Add2 protein_coding protein_coding MGP_CBAJ_T0078128.1 MGP_CBAJ_G0030633.1 mouse_genomes_project 6 93248943 93281922 + MGP_CBAJ_P0078128 Add2 protein_coding protein_coding MGP_CBAJ_T0010645.1 MGP_CBAJ_G0008783.1 mouse_genomes_project 6 54806722 54806807 - Mir196b miRNA miRNA MGP_CBAJ_T0001958.1 MGP_CBAJ_G0001874.1 mouse_genomes_project 6 60937496 60940338 - TEC TEC MGP_CBAJ_T0077178.1 MGP_CBAJ_G0030418.1 mouse_genomes_project 6 54846559 54853019 - MGP_CBAJ_P0077178 Hoxa13 protein_coding protein_coding MGP_CBAJ_T0077179.1 MGP_CBAJ_G0030418.1 mouse_genomes_project 6 54847736 54853018 - Hoxa13 protein_coding processed_transcript MGP_CBAJ_T0077180.1 MGP_CBAJ_G0030418.1 mouse_genomes_project 6 54847736 54853018 - Hoxa13 protein_coding processed_transcript MGP_CBAJ_T0077181.1 MGP_CBAJ_G0030418.1 mouse_genomes_project 6 54847736 54853018 - Hoxa13 protein_coding processed_transcript MGP_CBAJ_T0077182.1 MGP_CBAJ_G0030418.1 mouse_genomes_project 6 54847736 54853018 - MGP_CBAJ_P0077182 Hoxa13 protein_coding protein_coding MGP_CBAJ_T0008484.1 MGP_CBAJ_G0006851.1 mouse_genomes_project 6 52352280 52418351 + Gm3455 lincRNA lincRNA MGP_CBAJ_T0076135.1 MGP_CBAJ_G0030177.1 mouse_genomes_project 6 24797648 24824395 - MGP_CBAJ_P0076135 Gpr37 protein_coding protein_coding MGP_CBAJ_T0076136.1 MGP_CBAJ_G0030177.1 mouse_genomes_project 6 24799184 24825332 - MGP_CBAJ_P0076136 Gpr37 protein_coding protein_coding MGP_CBAJ_T0076725.1 MGP_CBAJ_G0030285.1 mouse_genomes_project 6 41548801 41553486 - MGP_CBAJ_P0076725 Prss37 protein_coding protein_coding MGP_CBAJ_T0076726.1 MGP_CBAJ_G0030285.1 mouse_genomes_project 6 41553146 41553461 - Prss37 protein_coding processed_transcript MGP_CBAJ_T0101991.1 MGP_CBAJ_G0040022.1 mouse_genomes_project 6 61286049 61286183 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015264.1 MGP_CBAJ_G0013376.1 mouse_genomes_project 6 98977910 98983868 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0078444.1 MGP_CBAJ_G0030698.1 mouse_genomes_project 6 97745895 97747632 + MGP_CBAJ_P0078444 Vmn1r54 protein_coding protein_coding MGP_CBAJ_T0015103.1 MGP_CBAJ_G0013215.1 mouse_genomes_project 6 48541847 48542295 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008508.1 MGP_CBAJ_G0006868.1 mouse_genomes_project 6 58324197 58339393 + 6430584L05Rik lincRNA lincRNA MGP_CBAJ_T0001897.1 MGP_CBAJ_G0001813.1 mouse_genomes_project 6 26806425 26809400 - TEC TEC MGP_CBAJ_T0076922.1 MGP_CBAJ_G0030357.1 mouse_genomes_project 6 49869748 49882330 + MGP_CBAJ_P0076922 Zfp212 protein_coding protein_coding MGP_CBAJ_T0076923.1 MGP_CBAJ_G0030357.1 mouse_genomes_project 6 49876003 49876844 + Zfp212 protein_coding retained_intron MGP_CBAJ_T0076741.1 MGP_CBAJ_G0030291.1 mouse_genomes_project 6 41976342 41985061 - MGP_CBAJ_P0076741 Moxd2 protein_coding protein_coding MGP_CBAJ_T0002112.1 MGP_CBAJ_G0002027.1 mouse_genomes_project 6 140641119 140641771 + TEC TEC MGP_CBAJ_T0080207.1 MGP_CBAJ_G0031080.1 mouse_genomes_project 6 148712129 148722736 - MGP_CBAJ_P0080207 Gsg1 protein_coding protein_coding MGP_CBAJ_T0080208.1 MGP_CBAJ_G0031080.1 mouse_genomes_project 6 148712132 148728920 - MGP_CBAJ_P0080208 Gsg1 protein_coding protein_coding MGP_CBAJ_T0080209.1 MGP_CBAJ_G0031080.1 mouse_genomes_project 6 148712132 148729076 - MGP_CBAJ_P0080209 Gsg1 protein_coding protein_coding MGP_CBAJ_T0080210.1 MGP_CBAJ_G0031080.1 mouse_genomes_project 6 148712139 148729101 - MGP_CBAJ_P0080210 Gsg1 protein_coding protein_coding MGP_CBAJ_T0008584.1 MGP_CBAJ_G0006927.1 mouse_genomes_project 6 109142902 109144298 + Gm44107 lincRNA lincRNA MGP_CBAJ_T0078966.1 MGP_CBAJ_G0030797.1 mouse_genomes_project 6 123836369 123840324 - MGP_CBAJ_P0078966 Fancd2os protein_coding nonsense_mediated_decay MGP_CBAJ_T0078967.1 MGP_CBAJ_G0030797.1 mouse_genomes_project 6 123836370 123840324 - MGP_CBAJ_P0078967 Fancd2os protein_coding protein_coding MGP_CBAJ_T0000265.1 MGP_CBAJ_G0000210.1 mouse_genomes_project 6 72727165 72727569 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0015070.1 MGP_CBAJ_G0013182.1 mouse_genomes_project 6 33309746 33310518 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011504.1 MGP_CBAJ_G0009642.1 mouse_genomes_project 6 17447764 17448079 + Gm22718 misc_RNA misc_RNA MGP_CBAJ_T0001924.1 MGP_CBAJ_G0001840.1 mouse_genomes_project 6 46690347 46692560 + TEC TEC MGP_CBAJ_T0017991.1 MGP_CBAJ_G0015368.1 mouse_genomes_project 6 40409553 40425596 + 8030453O22Rik processed_transcript antisense MGP_CBAJ_T0017992.1 MGP_CBAJ_G0015368.1 mouse_genomes_project 6 40409562 40428721 + 8030453O22Rik processed_transcript antisense MGP_CBAJ_T0017993.1 MGP_CBAJ_G0015368.1 mouse_genomes_project 6 40409566 40410315 + 8030453O22Rik processed_transcript retained_intron MGP_CBAJ_T0100696.1 MGP_CBAJ_G0038951.1 mouse_genomes_project 6 126249811 126249951 - Snora7a snoRNA snoRNA MGP_CBAJ_T0004970.1 MGP_CBAJ_G0004238.1 mouse_genomes_project 6 118137460 118230694 - 0610040F04Rik antisense antisense MGP_CBAJ_T0004971.1 MGP_CBAJ_G0004238.1 mouse_genomes_project 6 118170965 118174625 - 0610040F04Rik antisense antisense MGP_CBAJ_T0076548.1 MGP_CBAJ_G0030246.1 mouse_genomes_project 6 35828712 35864147 - MGP_CBAJ_P0076548 Mtpn protein_coding protein_coding MGP_CBAJ_T0076549.1 MGP_CBAJ_G0030246.1 mouse_genomes_project 6 35844097 35864058 - MGP_CBAJ_P0076549 Mtpn protein_coding protein_coding MGP_CBAJ_T0000136.1 MGP_CBAJ_G0000104.1 mouse_genomes_project 6 72273228 72273965 - MGP_CBAJ_P0000136 Igkv1-131 IG_V_gene IG_V_gene MGP_CBAJ_T0077860.1 MGP_CBAJ_G0030586.1 mouse_genomes_project 6 89817469 89820872 + MGP_CBAJ_P0077860 Mogs protein_coding protein_coding MGP_CBAJ_T0077861.1 MGP_CBAJ_G0030586.1 mouse_genomes_project 6 89818489 89819325 + Mogs protein_coding retained_intron MGP_CBAJ_T0008653.1 MGP_CBAJ_G0006982.1 mouse_genomes_project 6 153806526 153808462 - Gm44272 lincRNA lincRNA MGP_CBAJ_T0002133.1 MGP_CBAJ_G0002048.1 mouse_genomes_project 6 154622588 154623258 + TEC TEC MGP_CBAJ_T0004818.1 MGP_CBAJ_G0004137.1 mouse_genomes_project 6 3968612 4011401 - Dlx6os1 antisense antisense MGP_CBAJ_T0004819.1 MGP_CBAJ_G0004137.1 mouse_genomes_project 6 3968966 4020941 - Dlx6os1 antisense antisense MGP_CBAJ_T0077570.1 MGP_CBAJ_G0030528.1 mouse_genomes_project 6 76876442 76898706 + Chmp3 protein_coding processed_transcript MGP_CBAJ_T0077571.1 MGP_CBAJ_G0030528.1 mouse_genomes_project 6 76876519 76917502 + MGP_CBAJ_P0077571 Chmp3 protein_coding protein_coding MGP_CBAJ_T0077572.1 MGP_CBAJ_G0030528.1 mouse_genomes_project 6 76876519 76898725 + MGP_CBAJ_P0077572 Chmp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077573.1 MGP_CBAJ_G0030528.1 mouse_genomes_project 6 76876579 76921291 + MGP_CBAJ_P0077573 Chmp3 protein_coding protein_coding MGP_CBAJ_T0077574.1 MGP_CBAJ_G0030528.1 mouse_genomes_project 6 76876943 76913833 + Chmp3 protein_coding processed_transcript MGP_CBAJ_T0077575.1 MGP_CBAJ_G0030528.1 mouse_genomes_project 6 76917298 76919526 + Chmp3 protein_coding retained_intron MGP_CBAJ_T0015439.1 MGP_CBAJ_G0013551.1 mouse_genomes_project 6 162072773 162073232 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015093.1 MGP_CBAJ_G0013205.1 mouse_genomes_project 6 43986428 43986860 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098445.1 MGP_CBAJ_G0036707.1 mouse_genomes_project 6 140610483 140611862 - Gm44190 sense_intronic sense_intronic MGP_CBAJ_T0004881.1 MGP_CBAJ_G0004182.1 mouse_genomes_project 6 56924393 56928438 - 9530036M11Rik antisense antisense MGP_CBAJ_T0076920.1 MGP_CBAJ_G0030356.1 mouse_genomes_project 6 49822931 49853640 + MGP_CBAJ_P0076920 Zfp282 protein_coding protein_coding MGP_CBAJ_T0076921.1 MGP_CBAJ_G0030356.1 mouse_genomes_project 6 49823383 49838607 + Zfp282 protein_coding retained_intron MGP_CBAJ_T0015092.1 MGP_CBAJ_G0013204.1 mouse_genomes_project 6 43779558 43780356 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0102010.1 MGP_CBAJ_G0040041.1 mouse_genomes_project 6 93545817 93546954 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0079301.1 MGP_CBAJ_G0030859.1 mouse_genomes_project 6 130490023 130801601 - MGP_CBAJ_P0079301 Erc1 protein_coding protein_coding MGP_CBAJ_T0079302.1 MGP_CBAJ_G0030859.1 mouse_genomes_project 6 130490031 130774562 - MGP_CBAJ_P0079302 Erc1 protein_coding protein_coding MGP_CBAJ_T0079303.1 MGP_CBAJ_G0030859.1 mouse_genomes_project 6 130492935 130801510 - MGP_CBAJ_P0079303 Erc1 protein_coding protein_coding MGP_CBAJ_T0079304.1 MGP_CBAJ_G0030859.1 mouse_genomes_project 6 130493784 130801566 - MGP_CBAJ_P0079304 Erc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079305.1 MGP_CBAJ_G0030859.1 mouse_genomes_project 6 130494219 130688616 - MGP_CBAJ_P0079305 Erc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079306.1 MGP_CBAJ_G0030859.1 mouse_genomes_project 6 130494454 130801585 - MGP_CBAJ_P0079306 Erc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079307.1 MGP_CBAJ_G0030859.1 mouse_genomes_project 6 130494524 130801618 - MGP_CBAJ_P0079307 Erc1 protein_coding protein_coding MGP_CBAJ_T0079308.1 MGP_CBAJ_G0030859.1 mouse_genomes_project 6 130494739 130801540 - MGP_CBAJ_P0079308 Erc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079309.1 MGP_CBAJ_G0030859.1 mouse_genomes_project 6 130535153 130801575 - MGP_CBAJ_P0079309 Erc1 protein_coding unknown_likely_coding MGP_CBAJ_T0079310.1 MGP_CBAJ_G0030859.1 mouse_genomes_project 6 130539467 130544287 - Erc1 protein_coding retained_intron MGP_CBAJ_T0079311.1 MGP_CBAJ_G0030859.1 mouse_genomes_project 6 130662003 130744355 - Erc1 protein_coding processed_transcript MGP_CBAJ_T0079312.1 MGP_CBAJ_G0030859.1 mouse_genomes_project 6 130720542 130801553 - MGP_CBAJ_P0079312 Erc1 protein_coding protein_coding MGP_CBAJ_T0079313.1 MGP_CBAJ_G0030859.1 mouse_genomes_project 6 130773320 130775796 - Erc1 protein_coding retained_intron MGP_CBAJ_T0078772.1 MGP_CBAJ_G0030764.1 mouse_genomes_project 6 117604570 117621079 + MGP_CBAJ_P0078772 Setmar protein_coding protein_coding MGP_CBAJ_T0078773.1 MGP_CBAJ_G0030764.1 mouse_genomes_project 6 117604587 117621079 + MGP_CBAJ_P0078773 Setmar protein_coding nonsense_mediated_decay MGP_CBAJ_T0018062.1 MGP_CBAJ_G0015393.1 mouse_genomes_project 6 157440756 157462250 + Gm7457 processed_transcript antisense MGP_CBAJ_T0018063.1 MGP_CBAJ_G0015393.1 mouse_genomes_project 6 157440910 157445848 + Gm7457 processed_transcript retained_intron MGP_CBAJ_T0099424.1 MGP_CBAJ_G0037679.1 mouse_genomes_project 6 38739096 38739200 + Gm23231 snRNA snRNA MGP_CBAJ_T0077780.1 MGP_CBAJ_G0030568.1 mouse_genomes_project 6 88555564 88565359 - MGP_CBAJ_P0077780 Mrpl19 protein_coding protein_coding MGP_CBAJ_T0077781.1 MGP_CBAJ_G0030568.1 mouse_genomes_project 6 88561408 88562259 - Mrpl19 protein_coding retained_intron MGP_CBAJ_T0077782.1 MGP_CBAJ_G0030568.1 mouse_genomes_project 6 88561822 88565042 - Mrpl19 protein_coding processed_transcript MGP_CBAJ_T0008575.1 MGP_CBAJ_G0006921.1 mouse_genomes_project 6 102941403 102951556 + 4930511E03Rik lincRNA lincRNA MGP_CBAJ_T0015361.1 MGP_CBAJ_G0013473.1 mouse_genomes_project 6 135010709 135011469 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0075826.1 MGP_CBAJ_G0030112.1 mouse_genomes_project 6 3138918 3325147 - MGP_CBAJ_P0075826 Slc25a13 protein_coding protein_coding MGP_CBAJ_T0075827.1 MGP_CBAJ_G0030112.1 mouse_genomes_project 6 3138919 3325202 - MGP_CBAJ_P0075827 Slc25a13 protein_coding protein_coding MGP_CBAJ_T0075828.1 MGP_CBAJ_G0030112.1 mouse_genomes_project 6 3167613 3194556 - Slc25a13 protein_coding processed_transcript MGP_CBAJ_T0075829.1 MGP_CBAJ_G0030112.1 mouse_genomes_project 6 3214314 3277346 - Slc25a13 protein_coding processed_transcript MGP_CBAJ_T0075830.1 MGP_CBAJ_G0030112.1 mouse_genomes_project 6 3234805 3297897 - Slc25a13 protein_coding retained_intron MGP_CBAJ_T0076844.1 MGP_CBAJ_G0030331.1 mouse_genomes_project 6 44006555 44007509 + MGP_CBAJ_P0076844 Olfr453 protein_coding protein_coding MGP_CBAJ_T0079555.1 MGP_CBAJ_G0030906.1 mouse_genomes_project 6 134871377 134900577 + MGP_CBAJ_P0079555 Vmn2r19 protein_coding protein_coding MGP_CBAJ_T0102038.1 MGP_CBAJ_G0040068.1 mouse_genomes_project 6 146005484 146006413 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0076131.1 MGP_CBAJ_G0030175.1 mouse_genomes_project 6 23910446 23951718 + MGP_CBAJ_P0076131 Hyal5 protein_coding protein_coding MGP_CBAJ_T0076132.1 MGP_CBAJ_G0030175.1 mouse_genomes_project 6 23932695 23951565 + MGP_CBAJ_P0076132 Hyal5 protein_coding protein_coding MGP_CBAJ_T0076133.1 MGP_CBAJ_G0030175.1 mouse_genomes_project 6 23950296 23951505 + Hyal5 protein_coding processed_transcript MGP_CBAJ_T0015231.1 MGP_CBAJ_G0013343.1 mouse_genomes_project 6 84184205 84185225 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0076826.1 MGP_CBAJ_G0030323.1 mouse_genomes_project 6 43644575 43645668 + MGP_CBAJ_P0076826 Tas2r135 protein_coding protein_coding MGP_CBAJ_T0010640.1 MGP_CBAJ_G0008778.1 mouse_genomes_project 6 50029208 50029301 + Gm24563 miRNA miRNA MGP_CBAJ_T0076043.1 MGP_CBAJ_G0030151.1 mouse_genomes_project 6 17237895 17243370 + MGP_CBAJ_P0076043 Lsm8 protein_coding protein_coding MGP_CBAJ_T0076044.1 MGP_CBAJ_G0030151.1 mouse_genomes_project 6 17237957 17245068 + Lsm8 protein_coding retained_intron MGP_CBAJ_T0076045.1 MGP_CBAJ_G0030151.1 mouse_genomes_project 6 17237972 17239724 + Lsm8 protein_coding retained_intron MGP_CBAJ_T0076046.1 MGP_CBAJ_G0030151.1 mouse_genomes_project 6 17237984 17243064 + MGP_CBAJ_P0076046 Lsm8 protein_coding protein_coding MGP_CBAJ_T0015333.1 MGP_CBAJ_G0013445.1 mouse_genomes_project 6 126679051 126679448 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0080389.1 MGP_CBAJ_G0031115.1 mouse_genomes_project 6 155718994 155997296 + MGP_CBAJ_P0080389 Pde3a protein_coding protein_coding MGP_CBAJ_T0080390.1 MGP_CBAJ_G0031115.1 mouse_genomes_project 6 155719691 155958706 + Pde3a protein_coding retained_intron MGP_CBAJ_T0015152.1 MGP_CBAJ_G0013264.1 mouse_genomes_project 6 66148294 66148603 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015286.1 MGP_CBAJ_G0013398.1 mouse_genomes_project 6 108296564 108297030 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0079667.1 MGP_CBAJ_G0030933.1 mouse_genomes_project 6 136551459 136554577 + MGP_CBAJ_P0079667 Cdca3 protein_coding protein_coding MGP_CBAJ_T0079668.1 MGP_CBAJ_G0030933.1 mouse_genomes_project 6 136551600 136555614 + MGP_CBAJ_P0079668 Cdca3 protein_coding protein_coding MGP_CBAJ_T0079669.1 MGP_CBAJ_G0030933.1 mouse_genomes_project 6 136552129 136554498 + MGP_CBAJ_P0079669 Cdca3 protein_coding protein_coding MGP_CBAJ_T0079670.1 MGP_CBAJ_G0030933.1 mouse_genomes_project 6 136552147 136555445 + Cdca3 protein_coding retained_intron MGP_CBAJ_T0079671.1 MGP_CBAJ_G0030933.1 mouse_genomes_project 6 136552275 136553945 + Cdca3 protein_coding retained_intron MGP_CBAJ_T0079672.1 MGP_CBAJ_G0030933.1 mouse_genomes_project 6 136552287 136554352 + MGP_CBAJ_P0079672 Cdca3 protein_coding protein_coding MGP_CBAJ_T0078319.1 MGP_CBAJ_G0030670.1 mouse_genomes_project 6 95540985 95554170 + MGP_CBAJ_P0078319 Gata2 protein_coding protein_coding MGP_CBAJ_T0078320.1 MGP_CBAJ_G0030670.1 mouse_genomes_project 6 95545467 95554168 + MGP_CBAJ_P0078320 Gata2 protein_coding protein_coding MGP_CBAJ_T0078321.1 MGP_CBAJ_G0030670.1 mouse_genomes_project 6 95545467 95546797 + MGP_CBAJ_P0078321 Gata2 protein_coding protein_coding MGP_CBAJ_T0078322.1 MGP_CBAJ_G0030670.1 mouse_genomes_project 6 95548052 95549775 + Gata2 protein_coding retained_intron MGP_CBAJ_T0078323.1 MGP_CBAJ_G0030670.1 mouse_genomes_project 6 95551582 95552909 + Gata2 protein_coding retained_intron MGP_CBAJ_T0002109.1 MGP_CBAJ_G0002024.1 mouse_genomes_project 6 139948077 139950845 - TEC TEC MGP_CBAJ_T0015119.1 MGP_CBAJ_G0013231.1 mouse_genomes_project 6 51343274 51343476 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0018060.1 MGP_CBAJ_G0015392.1 mouse_genomes_project 6 142083315 142085182 - 1700101I11Rik processed_transcript TEC MGP_CBAJ_T0018061.1 MGP_CBAJ_G0015392.1 mouse_genomes_project 6 142083459 142084650 - 1700101I11Rik processed_transcript antisense MGP_CBAJ_T0002092.1 MGP_CBAJ_G0002008.1 mouse_genomes_project 6 127766750 127767595 + TEC TEC MGP_CBAJ_T0008419.1 MGP_CBAJ_G0006809.1 mouse_genomes_project 6 20715342 20799371 - Gm26719 lincRNA lincRNA MGP_CBAJ_T0077854.1 MGP_CBAJ_G0030583.1 mouse_genomes_project 6 89801646 89810361 + MGP_CBAJ_P0077854 protein_coding protein_coding MGP_CBAJ_T0077856.1 MGP_CBAJ_G0030583.1 mouse_genomes_project 6 89801703 89803900 + protein_coding retained_intron MGP_CBAJ_T0077857.1 MGP_CBAJ_G0030583.1 mouse_genomes_project 6 89809067 89809801 + protein_coding retained_intron MGP_CBAJ_T0080257.1 MGP_CBAJ_G0031092.1 mouse_genomes_project 6 150562255 150564170 - MGP_CBAJ_P0080257 Smco3 protein_coding protein_coding MGP_CBAJ_T0079624.1 MGP_CBAJ_G0030926.1 mouse_genomes_project 6 136462241 136479069 - MGP_CBAJ_P0079624 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078266.1 MGP_CBAJ_G0030662.1 mouse_genomes_project 6 95089376 95143850 - MGP_CBAJ_P0078266 Gm45140 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078270.1 MGP_CBAJ_G0030662.1 mouse_genomes_project 6 95092870 95124481 - MGP_CBAJ_P0078270 Gm45140 protein_coding protein_coding MGP_CBAJ_T0008451.1 MGP_CBAJ_G0006830.1 mouse_genomes_project 6 32752870 32753529 - BC049739 lincRNA lincRNA MGP_CBAJ_T0015195.1 MGP_CBAJ_G0013307.1 mouse_genomes_project 6 72219275 72220629 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000191.1 MGP_CBAJ_G0000143.1 mouse_genomes_project 6 74991498 74992223 - MGP_CBAJ_P0000191 Igkv1-35 IG_V_gene IG_V_gene MGP_CBAJ_T0000192.1 MGP_CBAJ_G0000143.1 mouse_genomes_project 6 74991498 74992223 - MGP_CBAJ_P0000192 Igkv1-35 IG_V_gene IG_V_gene MGP_CBAJ_T0001896.1 MGP_CBAJ_G0001812.1 mouse_genomes_project 6 23702012 23705139 - TEC TEC MGP_CBAJ_T0079952.1 MGP_CBAJ_G0030989.1 mouse_genomes_project 6 140675992 140698061 - MGP_CBAJ_P0079952 Itfg2 protein_coding protein_coding MGP_CBAJ_T0079953.1 MGP_CBAJ_G0030989.1 mouse_genomes_project 6 140676046 140676928 - MGP_CBAJ_P0079953 Itfg2 protein_coding protein_coding MGP_CBAJ_T0079954.1 MGP_CBAJ_G0030989.1 mouse_genomes_project 6 140676081 140698048 - MGP_CBAJ_P0079954 Itfg2 protein_coding protein_coding MGP_CBAJ_T0079955.1 MGP_CBAJ_G0030989.1 mouse_genomes_project 6 140676759 140697999 - MGP_CBAJ_P0079955 Itfg2 protein_coding protein_coding MGP_CBAJ_T0079956.1 MGP_CBAJ_G0030989.1 mouse_genomes_project 6 140676805 140677233 - Itfg2 protein_coding retained_intron MGP_CBAJ_T0079957.1 MGP_CBAJ_G0030989.1 mouse_genomes_project 6 140678133 140683965 - Itfg2 protein_coding retained_intron MGP_CBAJ_T0079958.1 MGP_CBAJ_G0030989.1 mouse_genomes_project 6 140679554 140698042 - MGP_CBAJ_P0079958 Itfg2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079959.1 MGP_CBAJ_G0030989.1 mouse_genomes_project 6 140680187 140698043 - MGP_CBAJ_P0079959 Itfg2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079960.1 MGP_CBAJ_G0030989.1 mouse_genomes_project 6 140685315 140698060 - Itfg2 protein_coding retained_intron MGP_CBAJ_T0079961.1 MGP_CBAJ_G0030989.1 mouse_genomes_project 6 140695272 140698048 - Itfg2 protein_coding retained_intron MGP_CBAJ_T0076113.1 MGP_CBAJ_G0030167.1 mouse_genomes_project 6 23465374 23538914 - MGP_CBAJ_P0076113 Iqub protein_coding protein_coding MGP_CBAJ_T0008521.1 MGP_CBAJ_G0006879.1 mouse_genomes_project 6 76424955 76426281 + Gm44427 lincRNA lincRNA MGP_CBAJ_T0000276.1 MGP_CBAJ_G0000221.1 mouse_genomes_project 6 73132107 73132406 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0101160.1 MGP_CBAJ_G0039341.1 mouse_genomes_project 6 69476279 69477349 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101161.1 MGP_CBAJ_G0039341.1 mouse_genomes_project 6 69476399 69477117 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0076242.1 MGP_CBAJ_G0030197.1 mouse_genomes_project 6 29063635 29075133 + Flnc protein_coding retained_intron MGP_CBAJ_T0076243.1 MGP_CBAJ_G0030197.1 mouse_genomes_project 6 29063655 29097573 + MGP_CBAJ_P0076243 Flnc protein_coding protein_coding MGP_CBAJ_T0076244.1 MGP_CBAJ_G0030197.1 mouse_genomes_project 6 29063655 29097573 + MGP_CBAJ_P0076244 Flnc protein_coding protein_coding MGP_CBAJ_T0002100.1 MGP_CBAJ_G0002015.1 mouse_genomes_project 6 136104866 136106818 - TEC TEC MGP_CBAJ_T0015315.1 MGP_CBAJ_G0013427.1 mouse_genomes_project 6 120586146 120586278 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015213.1 MGP_CBAJ_G0013325.1 mouse_genomes_project 6 76638391 76638790 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0075878.1 MGP_CBAJ_G0030126.1 mouse_genomes_project 6 5874707 6009222 - MGP_CBAJ_P0075878 Ica1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075879.1 MGP_CBAJ_G0030126.1 mouse_genomes_project 6 5874707 6033573 - MGP_CBAJ_P0075879 Ica1 protein_coding protein_coding MGP_CBAJ_T0075880.1 MGP_CBAJ_G0030126.1 mouse_genomes_project 6 5874707 6033858 - MGP_CBAJ_P0075880 Ica1 protein_coding protein_coding MGP_CBAJ_T0075881.1 MGP_CBAJ_G0030126.1 mouse_genomes_project 6 5874707 6033903 - MGP_CBAJ_P0075881 Ica1 protein_coding protein_coding MGP_CBAJ_T0075882.1 MGP_CBAJ_G0030126.1 mouse_genomes_project 6 5874879 5895826 - Ica1 protein_coding processed_transcript MGP_CBAJ_T0075883.1 MGP_CBAJ_G0030126.1 mouse_genomes_project 6 5906253 6033573 - MGP_CBAJ_P0075883 Ica1 protein_coding protein_coding MGP_CBAJ_T0075884.1 MGP_CBAJ_G0030126.1 mouse_genomes_project 6 5906948 5922695 - MGP_CBAJ_P0075884 Ica1 protein_coding protein_coding MGP_CBAJ_T0075885.1 MGP_CBAJ_G0030126.1 mouse_genomes_project 6 5906958 6033906 - MGP_CBAJ_P0075885 Ica1 protein_coding protein_coding MGP_CBAJ_T0075886.1 MGP_CBAJ_G0030126.1 mouse_genomes_project 6 5906959 5987938 - MGP_CBAJ_P0075886 Ica1 protein_coding protein_coding MGP_CBAJ_T0075887.1 MGP_CBAJ_G0030126.1 mouse_genomes_project 6 5981291 6033907 - Ica1 protein_coding processed_transcript MGP_CBAJ_T0075888.1 MGP_CBAJ_G0030126.1 mouse_genomes_project 6 6000555 6023307 - MGP_CBAJ_P0075888 Ica1 protein_coding protein_coding MGP_CBAJ_T0075889.1 MGP_CBAJ_G0030126.1 mouse_genomes_project 6 6005456 6033542 - MGP_CBAJ_P0075889 Ica1 protein_coding protein_coding MGP_CBAJ_T0018047.1 MGP_CBAJ_G0015387.1 mouse_genomes_project 6 132207261 132212718 + Gm4651 processed_transcript antisense MGP_CBAJ_T0018048.1 MGP_CBAJ_G0015387.1 mouse_genomes_project 6 132207393 132208885 + Gm4651 processed_transcript retained_intron MGP_CBAJ_T0017998.1 MGP_CBAJ_G0015371.1 mouse_genomes_project 6 54734399 54740585 + Hoxaas2 processed_transcript antisense MGP_CBAJ_T0017999.1 MGP_CBAJ_G0015371.1 mouse_genomes_project 6 54737652 54740698 + Hoxaas2 processed_transcript retained_intron MGP_CBAJ_T0018000.1 MGP_CBAJ_G0015371.1 mouse_genomes_project 6 54739644 54740698 + Hoxaas2 processed_transcript processed_transcript MGP_CBAJ_T0015202.1 MGP_CBAJ_G0013314.1 mouse_genomes_project 6 72920443 72921171 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001990.1 MGP_CBAJ_G0001906.1 mouse_genomes_project 6 83847522 83851560 - TEC TEC MGP_CBAJ_T0080364.1 MGP_CBAJ_G0031112.1 mouse_genomes_project 6 154748043 154957912 + MGP_CBAJ_P0080364 Plekha5 protein_coding protein_coding MGP_CBAJ_T0080365.1 MGP_CBAJ_G0031112.1 mouse_genomes_project 6 154748149 154941808 + MGP_CBAJ_P0080365 Plekha5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080366.1 MGP_CBAJ_G0031112.1 mouse_genomes_project 6 154748150 154938996 + MGP_CBAJ_P0080366 Plekha5 protein_coding protein_coding MGP_CBAJ_T0080367.1 MGP_CBAJ_G0031112.1 mouse_genomes_project 6 154748154 154887066 + MGP_CBAJ_P0080367 Plekha5 protein_coding protein_coding MGP_CBAJ_T0080368.1 MGP_CBAJ_G0031112.1 mouse_genomes_project 6 154855597 154938996 + MGP_CBAJ_P0080368 Plekha5 protein_coding protein_coding MGP_CBAJ_T0080369.1 MGP_CBAJ_G0031112.1 mouse_genomes_project 6 154865885 154957912 + Plekha5 protein_coding processed_transcript MGP_CBAJ_T0080370.1 MGP_CBAJ_G0031112.1 mouse_genomes_project 6 154878195 154957912 + MGP_CBAJ_P0080370 Plekha5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080371.1 MGP_CBAJ_G0031112.1 mouse_genomes_project 6 154878221 154892166 + Plekha5 protein_coding processed_transcript MGP_CBAJ_T0080372.1 MGP_CBAJ_G0031112.1 mouse_genomes_project 6 154878225 154957912 + MGP_CBAJ_P0080372 Plekha5 protein_coding protein_coding MGP_CBAJ_T0080373.1 MGP_CBAJ_G0031112.1 mouse_genomes_project 6 154878360 154957912 + MGP_CBAJ_P0080373 Plekha5 protein_coding protein_coding MGP_CBAJ_T0080374.1 MGP_CBAJ_G0031112.1 mouse_genomes_project 6 154905792 154957918 + MGP_CBAJ_P0080374 Plekha5 protein_coding unknown_likely_coding MGP_CBAJ_T0080375.1 MGP_CBAJ_G0031112.1 mouse_genomes_project 6 154906624 154927974 + Plekha5 protein_coding retained_intron MGP_CBAJ_T0080376.1 MGP_CBAJ_G0031112.1 mouse_genomes_project 6 154921427 154927981 + Plekha5 protein_coding retained_intron MGP_CBAJ_T0080377.1 MGP_CBAJ_G0031112.1 mouse_genomes_project 6 154921615 154957912 + MGP_CBAJ_P0080377 Plekha5 protein_coding protein_coding MGP_CBAJ_T0080378.1 MGP_CBAJ_G0031112.1 mouse_genomes_project 6 154930058 154936505 + Plekha5 protein_coding retained_intron MGP_CBAJ_T0078216.1 MGP_CBAJ_G0030648.1 mouse_genomes_project 6 94286714 94306046 + MGP_CBAJ_P0078216 Nfu1 protein_coding protein_coding MGP_CBAJ_T0078217.1 MGP_CBAJ_G0030648.1 mouse_genomes_project 6 94287314 94293241 + Nfu1 protein_coding retained_intron MGP_CBAJ_T0078218.1 MGP_CBAJ_G0030648.1 mouse_genomes_project 6 94287314 94306039 + MGP_CBAJ_P0078218 Nfu1 protein_coding protein_coding MGP_CBAJ_T0078219.1 MGP_CBAJ_G0030648.1 mouse_genomes_project 6 94287314 94306044 + MGP_CBAJ_P0078219 Nfu1 protein_coding protein_coding MGP_CBAJ_T0078220.1 MGP_CBAJ_G0030648.1 mouse_genomes_project 6 94287358 94289866 + Nfu1 protein_coding retained_intron MGP_CBAJ_T0078221.1 MGP_CBAJ_G0030648.1 mouse_genomes_project 6 94287367 94290973 + Nfu1 protein_coding retained_intron MGP_CBAJ_T0078222.1 MGP_CBAJ_G0030648.1 mouse_genomes_project 6 94287367 94300742 + MGP_CBAJ_P0078222 Nfu1 protein_coding protein_coding MGP_CBAJ_T0078223.1 MGP_CBAJ_G0030648.1 mouse_genomes_project 6 94287481 94303139 + Nfu1 protein_coding processed_transcript MGP_CBAJ_T0078224.1 MGP_CBAJ_G0030648.1 mouse_genomes_project 6 94302599 94306046 + Nfu1 protein_coding retained_intron MGP_CBAJ_T0011531.1 MGP_CBAJ_G0009669.1 mouse_genomes_project 6 90509601 90509795 + Gm27893 misc_RNA misc_RNA MGP_CBAJ_T0015176.1 MGP_CBAJ_G0013288.1 mouse_genomes_project 6 70563467 70568740 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101350.1 MGP_CBAJ_G0039432.1 mouse_genomes_project 6 135616185 135642469 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0077012.1 MGP_CBAJ_G0030377.1 mouse_genomes_project 6 50818693 50854893 + MGP_CBAJ_P0077012 Gm28053 protein_coding protein_coding MGP_CBAJ_T0077014.1 MGP_CBAJ_G0030377.1 mouse_genomes_project 6 50818740 50829775 + Gm28053 protein_coding retained_intron MGP_CBAJ_T0077018.1 MGP_CBAJ_G0030377.1 mouse_genomes_project 6 50839044 50854937 + MGP_CBAJ_P0077018 Gm28053 protein_coding protein_coding MGP_CBAJ_T0075928.1 MGP_CBAJ_G0030134.1 mouse_genomes_project 6 11389132 11454034 - MGP_CBAJ_P0075928 Bmt2 protein_coding protein_coding MGP_CBAJ_T0075929.1 MGP_CBAJ_G0030134.1 mouse_genomes_project 6 11390258 11454006 - MGP_CBAJ_P0075929 Bmt2 protein_coding protein_coding MGP_CBAJ_T0010646.1 MGP_CBAJ_G0008784.1 mouse_genomes_project 6 58465127 58465237 + Gm44352 miRNA miRNA MGP_CBAJ_T0002120.1 MGP_CBAJ_G0002035.1 mouse_genomes_project 6 147405045 147407920 + TEC TEC MGP_CBAJ_T0002003.1 MGP_CBAJ_G0001919.1 mouse_genomes_project 6 89771557 89773075 - TEC TEC MGP_CBAJ_T0000168.1 MGP_CBAJ_G0000126.1 mouse_genomes_project 6 73463685 73464241 - MGP_CBAJ_P0000168 Igkv4-92 IG_V_gene IG_V_gene MGP_CBAJ_T0079988.1 MGP_CBAJ_G0030998.1 mouse_genomes_project 6 141217564 141250104 - MGP_CBAJ_P0079988 protein_coding protein_coding MGP_CBAJ_T0079989.1 MGP_CBAJ_G0030998.1 mouse_genomes_project 6 141218233 141250086 - MGP_CBAJ_P0079989 protein_coding protein_coding MGP_CBAJ_T0079990.1 MGP_CBAJ_G0030998.1 mouse_genomes_project 6 141218752 141250063 - MGP_CBAJ_P0079990 protein_coding protein_coding MGP_CBAJ_T0079991.1 MGP_CBAJ_G0030998.1 mouse_genomes_project 6 141239899 141250078 - MGP_CBAJ_P0079991 protein_coding protein_coding MGP_CBAJ_T0080601.1 MGP_CBAJ_G0031154.1 mouse_genomes_project 6 161742651 161798717 + MGP_CBAJ_P0080601 Stk38l protein_coding protein_coding MGP_CBAJ_T0080602.1 MGP_CBAJ_G0031154.1 mouse_genomes_project 6 161742968 161778729 + MGP_CBAJ_P0080602 Stk38l protein_coding protein_coding MGP_CBAJ_T0080603.1 MGP_CBAJ_G0031154.1 mouse_genomes_project 6 161778094 161795532 + MGP_CBAJ_P0080603 Stk38l protein_coding unknown_likely_coding MGP_CBAJ_T0079251.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129379104 130048129 - MGP_CBAJ_P0079251 Cacna1c protein_coding protein_coding MGP_CBAJ_T0079252.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129384168 129387290 - Cacna1c protein_coding processed_transcript MGP_CBAJ_T0079253.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129384183 129559535 - Cacna1c protein_coding processed_transcript MGP_CBAJ_T0079254.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129384328 129947552 - MGP_CBAJ_P0079254 Cacna1c protein_coding protein_coding MGP_CBAJ_T0079255.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129384806 129947599 - MGP_CBAJ_P0079255 Cacna1c protein_coding protein_coding MGP_CBAJ_T0079256.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129384806 129947552 - MGP_CBAJ_P0079256 Cacna1c protein_coding protein_coding MGP_CBAJ_T0079257.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129384946 130048316 - MGP_CBAJ_P0079257 Cacna1c protein_coding protein_coding MGP_CBAJ_T0079258.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129385511 129947921 - MGP_CBAJ_P0079258 Cacna1c protein_coding protein_coding MGP_CBAJ_T0079259.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129385511 130048285 - MGP_CBAJ_P0079259 Cacna1c protein_coding protein_coding MGP_CBAJ_T0079260.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129385657 129947338 - MGP_CBAJ_P0079260 Cacna1c protein_coding protein_coding MGP_CBAJ_T0079261.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129385657 129947338 - MGP_CBAJ_P0079261 Cacna1c protein_coding protein_coding MGP_CBAJ_T0079262.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129385657 129947338 - MGP_CBAJ_P0079262 Cacna1c protein_coding protein_coding MGP_CBAJ_T0079263.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129385657 129947338 - MGP_CBAJ_P0079263 Cacna1c protein_coding protein_coding MGP_CBAJ_T0079264.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129385657 129947338 - MGP_CBAJ_P0079264 Cacna1c protein_coding protein_coding MGP_CBAJ_T0079265.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129385657 129947338 - MGP_CBAJ_P0079265 Cacna1c protein_coding protein_coding MGP_CBAJ_T0079266.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129385663 129916792 - MGP_CBAJ_P0079266 Cacna1c protein_coding protein_coding MGP_CBAJ_T0079267.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129385756 129947338 - MGP_CBAJ_P0079267 Cacna1c protein_coding protein_coding MGP_CBAJ_T0079268.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129385756 129947338 - MGP_CBAJ_P0079268 Cacna1c protein_coding protein_coding MGP_CBAJ_T0079269.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129385756 130048129 - MGP_CBAJ_P0079269 Cacna1c protein_coding protein_coding MGP_CBAJ_T0079270.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129405877 129419440 - Cacna1c protein_coding processed_transcript MGP_CBAJ_T0079271.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129503801 129508731 - Cacna1c protein_coding retained_intron MGP_CBAJ_T0079272.1 MGP_CBAJ_G0030852.1 mouse_genomes_project 6 129761331 130048307 - Cacna1c protein_coding processed_transcript MGP_CBAJ_T0000186.1 MGP_CBAJ_G0000140.1 mouse_genomes_project 6 74927627 74928090 - MGP_CBAJ_P0000186 Igkv12-38 IG_V_gene IG_V_gene MGP_CBAJ_T0000187.1 MGP_CBAJ_G0000140.1 mouse_genomes_project 6 74927627 74928090 - MGP_CBAJ_P0000187 Igkv12-38 IG_V_gene IG_V_gene MGP_CBAJ_T0015211.1 MGP_CBAJ_G0013323.1 mouse_genomes_project 6 75468124 75469470 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0079580.1 MGP_CBAJ_G0030916.1 mouse_genomes_project 6 136259059 136272583 + MGP_CBAJ_P0079580 protein_coding protein_coding MGP_CBAJ_T0100717.1 MGP_CBAJ_G0038972.1 mouse_genomes_project 6 163883551 163883688 - Gm23456 snoRNA snoRNA MGP_CBAJ_T0015125.1 MGP_CBAJ_G0013237.1 mouse_genomes_project 6 52977243 52977615 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0077373.1 MGP_CBAJ_G0030471.1 mouse_genomes_project 6 60985331 61093715 - MGP_CBAJ_P0077373 Vopp1 protein_coding protein_coding MGP_CBAJ_T0077374.1 MGP_CBAJ_G0030471.1 mouse_genomes_project 6 61015881 61093559 - MGP_CBAJ_P0077374 Vopp1 protein_coding protein_coding MGP_CBAJ_T0077375.1 MGP_CBAJ_G0030471.1 mouse_genomes_project 6 61018188 61093729 - MGP_CBAJ_P0077375 Vopp1 protein_coding protein_coding MGP_CBAJ_T0077376.1 MGP_CBAJ_G0030471.1 mouse_genomes_project 6 61021972 61093733 - MGP_CBAJ_P0077376 Vopp1 protein_coding protein_coding MGP_CBAJ_T0077377.1 MGP_CBAJ_G0030471.1 mouse_genomes_project 6 61026192 61093219 - Vopp1 protein_coding processed_transcript MGP_CBAJ_T0015132.1 MGP_CBAJ_G0013244.1 mouse_genomes_project 6 55512071 55512664 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005007.1 MGP_CBAJ_G0004269.1 mouse_genomes_project 6 139196628 139264100 + 9330179D12Rik antisense antisense MGP_CBAJ_T0005008.1 MGP_CBAJ_G0004269.1 mouse_genomes_project 6 139196865 139264392 + 9330179D12Rik antisense antisense MGP_CBAJ_T0079946.1 MGP_CBAJ_G0030988.1 mouse_genomes_project 6 140665871 140674763 + MGP_CBAJ_P0079946 protein_coding protein_coding MGP_CBAJ_T0079947.1 MGP_CBAJ_G0030988.1 mouse_genomes_project 6 140665883 140674656 + MGP_CBAJ_P0079947 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079948.1 MGP_CBAJ_G0030988.1 mouse_genomes_project 6 140666325 140675481 + MGP_CBAJ_P0079948 protein_coding protein_coding MGP_CBAJ_T0079949.1 MGP_CBAJ_G0030988.1 mouse_genomes_project 6 140666525 140675481 + MGP_CBAJ_P0079949 protein_coding protein_coding MGP_CBAJ_T0079950.1 MGP_CBAJ_G0030988.1 mouse_genomes_project 6 140666603 140675481 + protein_coding retained_intron MGP_CBAJ_T0079951.1 MGP_CBAJ_G0030988.1 mouse_genomes_project 6 140666848 140686113 + MGP_CBAJ_P0079951 protein_coding non_stop_decay MGP_CBAJ_T0077883.1 MGP_CBAJ_G0030590.1 mouse_genomes_project 6 89857044 89864054 - MGP_CBAJ_P0077883 Wdr54 protein_coding protein_coding MGP_CBAJ_T0077885.1 MGP_CBAJ_G0030590.1 mouse_genomes_project 6 89860393 89863877 - Wdr54 protein_coding retained_intron MGP_CBAJ_T0077886.1 MGP_CBAJ_G0030590.1 mouse_genomes_project 6 89860397 89864022 - Wdr54 protein_coding retained_intron MGP_CBAJ_T0077887.1 MGP_CBAJ_G0030590.1 mouse_genomes_project 6 89860969 89863922 - Wdr54 protein_coding processed_transcript MGP_CBAJ_T0077888.1 MGP_CBAJ_G0030590.1 mouse_genomes_project 6 89862211 89864054 - MGP_CBAJ_P0077888 Wdr54 protein_coding protein_coding MGP_CBAJ_T0077889.1 MGP_CBAJ_G0030590.1 mouse_genomes_project 6 89862869 89864036 - Wdr54 protein_coding processed_transcript MGP_CBAJ_T0004840.1 MGP_CBAJ_G0004152.1 mouse_genomes_project 6 32291133 32303887 + Plxna4os3 antisense antisense MGP_CBAJ_T0004841.1 MGP_CBAJ_G0004152.1 mouse_genomes_project 6 32291217 32303879 + Plxna4os3 antisense antisense MGP_CBAJ_T0078876.1 MGP_CBAJ_G0030782.1 mouse_genomes_project 6 123513092 123530864 + MGP_CBAJ_P0078876 Brpf1 protein_coding protein_coding MGP_CBAJ_T0078877.1 MGP_CBAJ_G0030782.1 mouse_genomes_project 6 123513121 123530701 + MGP_CBAJ_P0078877 Brpf1 protein_coding protein_coding MGP_CBAJ_T0078878.1 MGP_CBAJ_G0030782.1 mouse_genomes_project 6 123513147 123530720 + MGP_CBAJ_P0078878 Brpf1 protein_coding protein_coding MGP_CBAJ_T0078879.1 MGP_CBAJ_G0030782.1 mouse_genomes_project 6 123513147 123530867 + MGP_CBAJ_P0078879 Brpf1 protein_coding protein_coding MGP_CBAJ_T0078880.1 MGP_CBAJ_G0030782.1 mouse_genomes_project 6 123513179 123530848 + MGP_CBAJ_P0078880 Brpf1 protein_coding protein_coding MGP_CBAJ_T0078881.1 MGP_CBAJ_G0030782.1 mouse_genomes_project 6 123513268 123530622 + MGP_CBAJ_P0078881 Brpf1 protein_coding protein_coding MGP_CBAJ_T0078882.1 MGP_CBAJ_G0030782.1 mouse_genomes_project 6 123513384 123530723 + MGP_CBAJ_P0078882 Brpf1 protein_coding protein_coding MGP_CBAJ_T0078883.1 MGP_CBAJ_G0030782.1 mouse_genomes_project 6 123523128 123524424 + Brpf1 protein_coding retained_intron MGP_CBAJ_T0078884.1 MGP_CBAJ_G0030782.1 mouse_genomes_project 6 123526350 123528305 + Brpf1 protein_coding retained_intron MGP_CBAJ_T0078885.1 MGP_CBAJ_G0030782.1 mouse_genomes_project 6 123526508 123530701 + Brpf1 protein_coding retained_intron MGP_CBAJ_T0000160.1 MGP_CBAJ_G0000121.1 mouse_genomes_project 6 73236461 73236934 + MGP_CBAJ_P0000160 Igkv12-98 IG_V_gene IG_V_gene MGP_CBAJ_T0000161.1 MGP_CBAJ_G0000121.1 mouse_genomes_project 6 73236461 73236934 + MGP_CBAJ_P0000161 Igkv12-98 IG_V_gene IG_V_gene MGP_CBAJ_T0077566.1 MGP_CBAJ_G0030527.1 mouse_genomes_project 6 76821089 76839710 + MGP_CBAJ_P0077566 Rnf103 protein_coding protein_coding MGP_CBAJ_T0077567.1 MGP_CBAJ_G0030527.1 mouse_genomes_project 6 76821105 76839710 + MGP_CBAJ_P0077567 Rnf103 protein_coding protein_coding MGP_CBAJ_T0077568.1 MGP_CBAJ_G0030527.1 mouse_genomes_project 6 76821198 76839592 + MGP_CBAJ_P0077568 Rnf103 protein_coding protein_coding MGP_CBAJ_T0077569.1 MGP_CBAJ_G0030527.1 mouse_genomes_project 6 76831090 76835985 + Rnf103 protein_coding retained_intron MGP_CBAJ_T0102014.1 MGP_CBAJ_G0040045.1 mouse_genomes_project 6 97445227 97452179 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0001901.1 MGP_CBAJ_G0001817.1 mouse_genomes_project 6 28066170 28068042 + TEC TEC MGP_CBAJ_T0015227.1 MGP_CBAJ_G0013339.1 mouse_genomes_project 6 81674145 81674544 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002519.1 MGP_CBAJ_G0002424.1 mouse_genomes_project 6 42758318 42758366 + MGP_CBAJ_P0002519 Trbj1-1 TR_J_gene TR_J_gene MGP_CBAJ_T0010660.1 MGP_CBAJ_G0008798.1 mouse_genomes_project 6 92863909 92864004 - Gm27317 miRNA miRNA MGP_CBAJ_T0002076.1 MGP_CBAJ_G0001992.1 mouse_genomes_project 6 112621766 112624204 + TEC TEC MGP_CBAJ_T0102001.1 MGP_CBAJ_G0040032.1 mouse_genomes_project 6 64729726 64729991 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015097.1 MGP_CBAJ_G0013209.1 mouse_genomes_project 6 45184881 45185627 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015283.1 MGP_CBAJ_G0013395.1 mouse_genomes_project 6 106166182 106166434 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015113.1 MGP_CBAJ_G0013225.1 mouse_genomes_project 6 51101306 51101790 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015163.1 MGP_CBAJ_G0013275.1 mouse_genomes_project 6 69287007 69287236 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015368.1 MGP_CBAJ_G0013480.1 mouse_genomes_project 6 137040243 137040541 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0080010.1 MGP_CBAJ_G0031005.1 mouse_genomes_project 6 141842197 141851847 - MGP_CBAJ_P0080010 4922502D21Rik protein_coding protein_coding MGP_CBAJ_T0080011.1 MGP_CBAJ_G0031005.1 mouse_genomes_project 6 141842880 141846730 - MGP_CBAJ_P0080011 4922502D21Rik protein_coding protein_coding MGP_CBAJ_T0077855.1 MGP_CBAJ_G0030584.1 mouse_genomes_project 6 89801662 89811906 + MGP_CBAJ_P0077855 Gm42688 protein_coding nonsense_mediated_decay MGP_CBAJ_T0015137.1 MGP_CBAJ_G0013249.1 mouse_genomes_project 6 61305348 61305786 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004882.1 MGP_CBAJ_G0004183.1 mouse_genomes_project 6 57281956 57291526 - Gm44026 antisense antisense MGP_CBAJ_T0077494.1 MGP_CBAJ_G0030507.1 mouse_genomes_project 6 70986520 70987512 - MGP_CBAJ_P0077494 protein_coding protein_coding MGP_CBAJ_T0015223.1 MGP_CBAJ_G0013335.1 mouse_genomes_project 6 79531330 79531516 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015129.1 MGP_CBAJ_G0013241.1 mouse_genomes_project 6 54692252 54692521 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0078346.1 MGP_CBAJ_G0030675.1 mouse_genomes_project 6 95921440 95998957 - MGP_CBAJ_P0078346 Kbtbd12 protein_coding protein_coding MGP_CBAJ_T0078347.1 MGP_CBAJ_G0030675.1 mouse_genomes_project 6 95921446 95990030 - MGP_CBAJ_P0078347 Kbtbd12 protein_coding protein_coding MGP_CBAJ_T0078348.1 MGP_CBAJ_G0030675.1 mouse_genomes_project 6 95958181 95962305 - Kbtbd12 protein_coding retained_intron MGP_CBAJ_T0078349.1 MGP_CBAJ_G0030675.1 mouse_genomes_project 6 95985281 95998963 - Kbtbd12 protein_coding retained_intron MGP_CBAJ_T0078350.1 MGP_CBAJ_G0030675.1 mouse_genomes_project 6 95985560 95990051 - Kbtbd12 protein_coding processed_transcript MGP_CBAJ_T0078351.1 MGP_CBAJ_G0030675.1 mouse_genomes_project 6 95988964 95998960 - Kbtbd12 protein_coding retained_intron MGP_CBAJ_T0078352.1 MGP_CBAJ_G0030675.1 mouse_genomes_project 6 95990145 96009445 - MGP_CBAJ_P0078352 Kbtbd12 protein_coding protein_coding MGP_CBAJ_T0015197.1 MGP_CBAJ_G0013309.1 mouse_genomes_project 6 72285432 72286511 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008624.1 MGP_CBAJ_G0006963.1 mouse_genomes_project 6 139365418 139378766 - Gm38404 lincRNA lincRNA MGP_CBAJ_T0077290.1 MGP_CBAJ_G0030441.1 mouse_genomes_project 6 58300294 58306835 + Ghrhr protein_coding retained_intron MGP_CBAJ_T0077291.1 MGP_CBAJ_G0030441.1 mouse_genomes_project 6 58300342 58315838 + MGP_CBAJ_P0077291 Ghrhr protein_coding protein_coding MGP_CBAJ_T0077292.1 MGP_CBAJ_G0030441.1 mouse_genomes_project 6 58300364 58315627 + MGP_CBAJ_P0077292 Ghrhr protein_coding protein_coding MGP_CBAJ_T0101985.1 MGP_CBAJ_G0040016.1 mouse_genomes_project 6 44461391 44461698 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0076959.1 MGP_CBAJ_G0030363.1 mouse_genomes_project 6 50521013 50579534 + MGP_CBAJ_P0076959 Sspo protein_coding protein_coding MGP_CBAJ_T0076960.1 MGP_CBAJ_G0030363.1 mouse_genomes_project 6 50521013 50579549 + MGP_CBAJ_P0076960 Sspo protein_coding protein_coding MGP_CBAJ_T0076961.1 MGP_CBAJ_G0030363.1 mouse_genomes_project 6 50555356 50562242 + Sspo protein_coding retained_intron MGP_CBAJ_T0076962.1 MGP_CBAJ_G0030363.1 mouse_genomes_project 6 50562810 50579549 + MGP_CBAJ_P0076962 Sspo protein_coding nonsense_mediated_decay MGP_CBAJ_T0076963.1 MGP_CBAJ_G0030363.1 mouse_genomes_project 6 50572084 50574511 + MGP_CBAJ_P0076963 Sspo protein_coding protein_coding MGP_CBAJ_T0018024.1 MGP_CBAJ_G0015379.1 mouse_genomes_project 6 71297742 71298547 - 4930597O21Rik processed_transcript retained_intron MGP_CBAJ_T0018025.1 MGP_CBAJ_G0015379.1 mouse_genomes_project 6 71297744 71299515 - 4930597O21Rik processed_transcript bidirectional_promoter_lncRNA MGP_CBAJ_T0099452.1 MGP_CBAJ_G0037707.1 mouse_genomes_project 6 122708967 122709074 - Gm23002 snRNA snRNA MGP_CBAJ_T0005025.1 MGP_CBAJ_G0004284.1 mouse_genomes_project 6 149422071 149431550 + Gm14330 antisense antisense MGP_CBAJ_T0076761.1 MGP_CBAJ_G0030304.1 mouse_genomes_project 6 42889495 42918077 - MGP_CBAJ_P0076761 Trpv5 protein_coding protein_coding MGP_CBAJ_T0076762.1 MGP_CBAJ_G0030304.1 mouse_genomes_project 6 42890452 42917963 - MGP_CBAJ_P0076762 Trpv5 protein_coding protein_coding MGP_CBAJ_T0015426.1 MGP_CBAJ_G0013538.1 mouse_genomes_project 6 154313008 154314198 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0076914.1 MGP_CBAJ_G0030354.1 mouse_genomes_project 6 49763104 49774637 - MGP_CBAJ_P0076914 Zfp786 protein_coding protein_coding MGP_CBAJ_T0076915.1 MGP_CBAJ_G0030354.1 mouse_genomes_project 6 49765496 49774338 - Zfp786 protein_coding processed_transcript MGP_CBAJ_T0076916.1 MGP_CBAJ_G0030354.1 mouse_genomes_project 6 49771952 49774274 - Zfp786 protein_coding retained_intron MGP_CBAJ_T0010629.1 MGP_CBAJ_G0008767.1 mouse_genomes_project 6 29904501 29904576 - Mir182 miRNA miRNA MGP_CBAJ_T0015212.1 MGP_CBAJ_G0013324.1 mouse_genomes_project 6 75497839 75499180 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008558.1 MGP_CBAJ_G0006910.1 mouse_genomes_project 6 95535491 95537776 - Gm44246 lincRNA lincRNA MGP_CBAJ_T0000270.1 MGP_CBAJ_G0000215.1 mouse_genomes_project 6 72952051 72952706 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0100694.1 MGP_CBAJ_G0038949.1 mouse_genomes_project 6 114463801 114463940 + Gm23339 snoRNA snoRNA MGP_CBAJ_T0076701.1 MGP_CBAJ_G0030279.1 mouse_genomes_project 6 41335895 41412227 + MGP_CBAJ_P0076701 Agk protein_coding protein_coding MGP_CBAJ_T0076702.1 MGP_CBAJ_G0030279.1 mouse_genomes_project 6 41336208 41384269 + Agk protein_coding retained_intron MGP_CBAJ_T0076703.1 MGP_CBAJ_G0030279.1 mouse_genomes_project 6 41336210 41337491 + Agk protein_coding retained_intron MGP_CBAJ_T0076704.1 MGP_CBAJ_G0030279.1 mouse_genomes_project 6 41336231 41364839 + Agk protein_coding retained_intron MGP_CBAJ_T0076705.1 MGP_CBAJ_G0030279.1 mouse_genomes_project 6 41343270 41363488 + Agk protein_coding processed_transcript MGP_CBAJ_T0076706.1 MGP_CBAJ_G0030279.1 mouse_genomes_project 6 41343270 41372914 + MGP_CBAJ_P0076706 Agk protein_coding nonsense_mediated_decay MGP_CBAJ_T0076707.1 MGP_CBAJ_G0030279.1 mouse_genomes_project 6 41365383 41368383 + Agk protein_coding retained_intron MGP_CBAJ_T0076708.1 MGP_CBAJ_G0030279.1 mouse_genomes_project 6 41391411 41411082 + Agk protein_coding retained_intron MGP_CBAJ_T0001904.1 MGP_CBAJ_G0001820.1 mouse_genomes_project 6 29192008 29193621 - TEC TEC MGP_CBAJ_T0080287.1 MGP_CBAJ_G0031100.1 mouse_genomes_project 6 151407160 151603791 - MGP_CBAJ_P0080287 Eps8 protein_coding protein_coding MGP_CBAJ_T0080288.1 MGP_CBAJ_G0031100.1 mouse_genomes_project 6 151407583 151513235 - MGP_CBAJ_P0080288 Eps8 protein_coding protein_coding MGP_CBAJ_T0080289.1 MGP_CBAJ_G0031100.1 mouse_genomes_project 6 151408093 151603791 - MGP_CBAJ_P0080289 Eps8 protein_coding protein_coding MGP_CBAJ_T0080290.1 MGP_CBAJ_G0031100.1 mouse_genomes_project 6 151433390 151602806 - MGP_CBAJ_P0080290 Eps8 protein_coding protein_coding MGP_CBAJ_T0080291.1 MGP_CBAJ_G0031100.1 mouse_genomes_project 6 151448115 151455352 - Eps8 protein_coding processed_transcript MGP_CBAJ_T0080292.1 MGP_CBAJ_G0031100.1 mouse_genomes_project 6 151450867 151609378 - MGP_CBAJ_P0080292 Eps8 protein_coding protein_coding MGP_CBAJ_T0080293.1 MGP_CBAJ_G0031100.1 mouse_genomes_project 6 151450891 151455295 - Eps8 protein_coding retained_intron MGP_CBAJ_T0080294.1 MGP_CBAJ_G0031100.1 mouse_genomes_project 6 151458635 151531273 - MGP_CBAJ_P0080294 Eps8 protein_coding protein_coding MGP_CBAJ_T0080295.1 MGP_CBAJ_G0031100.1 mouse_genomes_project 6 151469896 151603735 - Eps8 protein_coding processed_transcript MGP_CBAJ_T0080296.1 MGP_CBAJ_G0031100.1 mouse_genomes_project 6 151477321 151480529 - Eps8 protein_coding retained_intron MGP_CBAJ_T0080297.1 MGP_CBAJ_G0031100.1 mouse_genomes_project 6 151480078 151602806 - MGP_CBAJ_P0080297 Eps8 protein_coding protein_coding MGP_CBAJ_T0080298.1 MGP_CBAJ_G0031100.1 mouse_genomes_project 6 151481776 151603748 - MGP_CBAJ_P0080298 Eps8 protein_coding protein_coding MGP_CBAJ_T0080299.1 MGP_CBAJ_G0031100.1 mouse_genomes_project 6 151509361 151512977 - Eps8 protein_coding retained_intron MGP_CBAJ_T0008429.1 MGP_CBAJ_G0006815.1 mouse_genomes_project 6 30787802 30837761 + 4930412F09Rik lincRNA lincRNA MGP_CBAJ_T0001965.1 MGP_CBAJ_G0001881.1 mouse_genomes_project 6 76557654 76560499 + TEC TEC MGP_CBAJ_T0001912.1 MGP_CBAJ_G0001828.1 mouse_genomes_project 6 33789243 33791371 - TEC TEC MGP_CBAJ_T0004972.1 MGP_CBAJ_G0004239.1 mouse_genomes_project 6 120470342 120476611 - Gm20387 antisense antisense MGP_CBAJ_T0077542.1 MGP_CBAJ_G0030519.1 mouse_genomes_project 6 76178725 76183256 + MGP_CBAJ_P0077542 Foxi3 protein_coding protein_coding MGP_CBAJ_T0077543.1 MGP_CBAJ_G0030519.1 mouse_genomes_project 6 76178800 76183259 + MGP_CBAJ_P0077543 Foxi3 protein_coding protein_coding MGP_CBAJ_T0002086.1 MGP_CBAJ_G0002002.1 mouse_genomes_project 6 123938647 123939185 + TEC TEC MGP_CBAJ_T0080303.1 MGP_CBAJ_G0031102.1 mouse_genomes_project 6 151720444 151758118 + Dera protein_coding retained_intron MGP_CBAJ_T0080304.1 MGP_CBAJ_G0031102.1 mouse_genomes_project 6 151720444 151733153 + Dera protein_coding processed_transcript MGP_CBAJ_T0080305.1 MGP_CBAJ_G0031102.1 mouse_genomes_project 6 151720454 151818914 + MGP_CBAJ_P0080305 Dera protein_coding protein_coding MGP_CBAJ_T0080306.1 MGP_CBAJ_G0031102.1 mouse_genomes_project 6 151720456 151819351 + MGP_CBAJ_P0080306 Dera protein_coding protein_coding MGP_CBAJ_T0080307.1 MGP_CBAJ_G0031102.1 mouse_genomes_project 6 151720474 151842991 + MGP_CBAJ_P0080307 Dera protein_coding protein_coding MGP_CBAJ_T0080308.1 MGP_CBAJ_G0031102.1 mouse_genomes_project 6 151720489 151738003 + Dera protein_coding processed_transcript MGP_CBAJ_T0080309.1 MGP_CBAJ_G0031102.1 mouse_genomes_project 6 151720513 151818893 + MGP_CBAJ_P0080309 Dera protein_coding protein_coding MGP_CBAJ_T0080310.1 MGP_CBAJ_G0031102.1 mouse_genomes_project 6 151732856 151733154 + Dera protein_coding TEC MGP_CBAJ_T0080311.1 MGP_CBAJ_G0031102.1 mouse_genomes_project 6 151748339 151758943 + Dera protein_coding processed_transcript MGP_CBAJ_T0080312.1 MGP_CBAJ_G0031102.1 mouse_genomes_project 6 151753958 151755623 + Dera protein_coding retained_intron MGP_CBAJ_T0080313.1 MGP_CBAJ_G0031102.1 mouse_genomes_project 6 151756788 151818940 + MGP_CBAJ_P0080313 Dera protein_coding protein_coding MGP_CBAJ_T0080314.1 MGP_CBAJ_G0031102.1 mouse_genomes_project 6 151772775 151785423 + Dera protein_coding processed_transcript MGP_CBAJ_T0080315.1 MGP_CBAJ_G0031102.1 mouse_genomes_project 6 151805894 151842465 + MGP_CBAJ_P0080315 Dera protein_coding protein_coding MGP_CBAJ_T0080316.1 MGP_CBAJ_G0031102.1 mouse_genomes_project 6 151816329 151819537 + Dera protein_coding retained_intron MGP_CBAJ_T0080317.1 MGP_CBAJ_G0031102.1 mouse_genomes_project 6 151818308 151825158 + MGP_CBAJ_P0080317 Dera protein_coding protein_coding MGP_CBAJ_T0004995.1 MGP_CBAJ_G0004258.1 mouse_genomes_project 6 136238809 136241015 - Gm44096 antisense antisense MGP_CBAJ_T0000144.1 MGP_CBAJ_G0000109.1 mouse_genomes_project 6 72531904 72532391 - MGP_CBAJ_P0000144 Igkv9-123 IG_V_gene IG_V_gene MGP_CBAJ_T0015387.1 MGP_CBAJ_G0013499.1 mouse_genomes_project 6 141103093 141103210 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015169.1 MGP_CBAJ_G0013281.1 mouse_genomes_project 6 69431316 69432511 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0080076.1 MGP_CBAJ_G0031028.1 mouse_genomes_project 6 142992469 143007075 - MGP_CBAJ_P0080076 protein_coding protein_coding MGP_CBAJ_T0008596.1 MGP_CBAJ_G0006937.1 mouse_genomes_project 6 122273921 122275733 + 1700054K19Rik lincRNA lincRNA MGP_CBAJ_T0001964.1 MGP_CBAJ_G0001880.1 mouse_genomes_project 6 76358628 76359534 - TEC TEC MGP_CBAJ_T0076830.1 MGP_CBAJ_G0030327.1 mouse_genomes_project 6 43804057 43805011 - MGP_CBAJ_P0076830 Olfr455 protein_coding protein_coding MGP_CBAJ_T0000146.1 MGP_CBAJ_G0000111.1 mouse_genomes_project 6 72611671 72884412 + MGP_CBAJ_P0000146 Igkv1-110 IG_V_gene IG_V_gene MGP_CBAJ_T0008670.1 MGP_CBAJ_G0006994.1 mouse_genomes_project 6 160973135 160975363 - Gm44269 lincRNA lincRNA MGP_CBAJ_T0101995.1 MGP_CBAJ_G0040026.1 mouse_genomes_project 6 61410458 61411352 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0077190.1 MGP_CBAJ_G0030421.1 mouse_genomes_project 6 55371713 55433506 + MGP_CBAJ_P0077190 Tax1bp1 protein_coding protein_coding MGP_CBAJ_T0077191.1 MGP_CBAJ_G0030421.1 mouse_genomes_project 6 55371734 55391209 + MGP_CBAJ_P0077191 Tax1bp1 protein_coding protein_coding MGP_CBAJ_T0077192.1 MGP_CBAJ_G0030421.1 mouse_genomes_project 6 55371747 55389530 + Tax1bp1 protein_coding retained_intron MGP_CBAJ_T0077193.1 MGP_CBAJ_G0030421.1 mouse_genomes_project 6 55372203 55391243 + MGP_CBAJ_P0077193 Tax1bp1 protein_coding protein_coding MGP_CBAJ_T0077194.1 MGP_CBAJ_G0030421.1 mouse_genomes_project 6 55372334 55385286 + MGP_CBAJ_P0077194 Tax1bp1 protein_coding protein_coding MGP_CBAJ_T0077195.1 MGP_CBAJ_G0030421.1 mouse_genomes_project 6 55400082 55402010 + Tax1bp1 protein_coding processed_transcript MGP_CBAJ_T0077196.1 MGP_CBAJ_G0030421.1 mouse_genomes_project 6 55421528 55429006 + Tax1bp1 protein_coding retained_intron MGP_CBAJ_T0001983.1 MGP_CBAJ_G0001899.1 mouse_genomes_project 6 83447583 83450430 - TEC TEC MGP_CBAJ_T0018049.1 MGP_CBAJ_G0015388.1 mouse_genomes_project 6 133985652 133998226 - Gm16556 processed_transcript processed_transcript MGP_CBAJ_T0018050.1 MGP_CBAJ_G0015388.1 mouse_genomes_project 6 133985678 133998202 - Gm16556 processed_transcript processed_transcript MGP_CBAJ_T0018038.1 MGP_CBAJ_G0015384.1 mouse_genomes_project 6 103285625 103365505 - AY512915 processed_transcript antisense MGP_CBAJ_T0018039.1 MGP_CBAJ_G0015384.1 mouse_genomes_project 6 103306549 103365492 - AY512915 processed_transcript antisense MGP_CBAJ_T0018040.1 MGP_CBAJ_G0015384.1 mouse_genomes_project 6 103320431 103365507 - AY512915 processed_transcript lincRNA MGP_CBAJ_T0018041.1 MGP_CBAJ_G0015384.1 mouse_genomes_project 6 103342114 103365485 - AY512915 processed_transcript antisense MGP_CBAJ_T0018042.1 MGP_CBAJ_G0015384.1 mouse_genomes_project 6 103356316 103365491 - AY512915 processed_transcript processed_transcript MGP_CBAJ_T0015374.1 MGP_CBAJ_G0013486.1 mouse_genomes_project 6 139218904 139219424 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002131.1 MGP_CBAJ_G0002046.1 mouse_genomes_project 6 154023255 154025154 + TEC TEC MGP_CBAJ_T0015239.1 MGP_CBAJ_G0013351.1 mouse_genomes_project 6 89569362 89570556 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0079387.1 MGP_CBAJ_G0030870.1 mouse_genomes_project 6 131774039 131835532 + Cecr2 protein_coding retained_intron MGP_CBAJ_T0079388.1 MGP_CBAJ_G0030870.1 mouse_genomes_project 6 131774091 131886752 + MGP_CBAJ_P0079388 Cecr2 protein_coding protein_coding MGP_CBAJ_T0079389.1 MGP_CBAJ_G0030870.1 mouse_genomes_project 6 131774205 131835360 + Cecr2 protein_coding processed_transcript MGP_CBAJ_T0079390.1 MGP_CBAJ_G0030870.1 mouse_genomes_project 6 131774252 131879907 + MGP_CBAJ_P0079390 Cecr2 protein_coding protein_coding MGP_CBAJ_T0079391.1 MGP_CBAJ_G0030870.1 mouse_genomes_project 6 131847713 131869683 + Cecr2 protein_coding processed_transcript MGP_CBAJ_T0079392.1 MGP_CBAJ_G0030870.1 mouse_genomes_project 6 131847780 131868558 + MGP_CBAJ_P0079392 Cecr2 protein_coding protein_coding MGP_CBAJ_T0079393.1 MGP_CBAJ_G0030870.1 mouse_genomes_project 6 131848910 131853015 + Cecr2 protein_coding retained_intron MGP_CBAJ_T0079394.1 MGP_CBAJ_G0030870.1 mouse_genomes_project 6 131871142 131874715 + MGP_CBAJ_P0079394 Cecr2 protein_coding protein_coding MGP_CBAJ_T0079865.1 MGP_CBAJ_G0030970.1 mouse_genomes_project 6 138883604 138931528 - MGP_CBAJ_P0079865 Dyrk4 protein_coding protein_coding MGP_CBAJ_T0079866.1 MGP_CBAJ_G0030970.1 mouse_genomes_project 6 138883777 138892971 - MGP_CBAJ_P0079866 Dyrk4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079867.1 MGP_CBAJ_G0030970.1 mouse_genomes_project 6 138883783 138917233 - Dyrk4 protein_coding processed_transcript MGP_CBAJ_T0080267.1 MGP_CBAJ_G0031097.1 mouse_genomes_project 6 150711030 150767027 + MGP_CBAJ_P0080267 Pde6h protein_coding protein_coding MGP_CBAJ_T0080271.1 MGP_CBAJ_G0031097.1 mouse_genomes_project 6 150758352 150772373 + MGP_CBAJ_P0080271 Pde6h protein_coding protein_coding MGP_CBAJ_T0080272.1 MGP_CBAJ_G0031097.1 mouse_genomes_project 6 150758362 150767272 + Pde6h protein_coding retained_intron MGP_CBAJ_T0080273.1 MGP_CBAJ_G0031097.1 mouse_genomes_project 6 150763079 150767058 + MGP_CBAJ_P0080273 Pde6h protein_coding protein_coding MGP_CBAJ_T0080098.1 MGP_CBAJ_G0031034.1 mouse_genomes_project 6 144405097 144450830 + MGP_CBAJ_P0080098 protein_coding protein_coding MGP_CBAJ_T0076713.1 MGP_CBAJ_G0030281.1 mouse_genomes_project 6 41456316 41472528 + MGP_CBAJ_P0076713 Wee2 protein_coding protein_coding MGP_CBAJ_T0076714.1 MGP_CBAJ_G0030281.1 mouse_genomes_project 6 41460073 41487553 + MGP_CBAJ_P0076714 Wee2 protein_coding protein_coding MGP_CBAJ_T0076715.1 MGP_CBAJ_G0030281.1 mouse_genomes_project 6 41460147 41461365 + MGP_CBAJ_P0076715 Wee2 protein_coding protein_coding MGP_CBAJ_T0015293.1 MGP_CBAJ_G0013405.1 mouse_genomes_project 6 110451857 110452313 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0080101.1 MGP_CBAJ_G0031037.1 mouse_genomes_project 6 144625165 144626197 - MGP_CBAJ_P0080101 Tas2r107 protein_coding protein_coding MGP_CBAJ_T0080640.1 MGP_CBAJ_G0031162.1 mouse_genomes_project 6 162143452 162172047 + MGP_CBAJ_P0080640 Klhl42 protein_coding protein_coding MGP_CBAJ_T0080641.1 MGP_CBAJ_G0031162.1 mouse_genomes_project 6 162162256 162167441 + Klhl42 protein_coding processed_transcript MGP_CBAJ_T0080642.1 MGP_CBAJ_G0031162.1 mouse_genomes_project 6 162167361 162169868 + MGP_CBAJ_P0080642 Klhl42 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079013.1 MGP_CBAJ_G0030807.1 mouse_genomes_project 6 124716862 124802398 + MGP_CBAJ_P0079013 Hrh1 protein_coding protein_coding MGP_CBAJ_T0079014.1 MGP_CBAJ_G0030807.1 mouse_genomes_project 6 124717012 124798955 + MGP_CBAJ_P0079014 Hrh1 protein_coding protein_coding MGP_CBAJ_T0079015.1 MGP_CBAJ_G0030807.1 mouse_genomes_project 6 124722592 124801558 + MGP_CBAJ_P0079015 Hrh1 protein_coding protein_coding MGP_CBAJ_T0079016.1 MGP_CBAJ_G0030807.1 mouse_genomes_project 6 124722750 124801492 + MGP_CBAJ_P0079016 Hrh1 protein_coding protein_coding MGP_CBAJ_T0079017.1 MGP_CBAJ_G0030807.1 mouse_genomes_project 6 124777501 124801556 + MGP_CBAJ_P0079017 Hrh1 protein_coding protein_coding MGP_CBAJ_T0004919.1 MGP_CBAJ_G0004207.1 mouse_genomes_project 6 90846944 90850168 - Gm43918 antisense antisense MGP_CBAJ_T0098070.1 MGP_CBAJ_G0036343.1 mouse_genomes_project 6 22603761 22603894 - Gm24217 rRNA rRNA MGP_CBAJ_T0015104.1 MGP_CBAJ_G0013216.1 mouse_genomes_project 6 49509114 49509304 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015011.1 MGP_CBAJ_G0013123.1 mouse_genomes_project 6 3463763 3463988 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0076747.1 MGP_CBAJ_G0030295.1 mouse_genomes_project 6 42126935 42132177 - MGP_CBAJ_P0076747 2210010C04Rik protein_coding protein_coding MGP_CBAJ_T0000145.1 MGP_CBAJ_G0000110.1 mouse_genomes_project 6 72611668 72884412 + MGP_CBAJ_P0000145 Igkv1-117 IG_V_gene IG_V_gene MGP_CBAJ_T0078838.1 MGP_CBAJ_G0030778.1 mouse_genomes_project 6 123250572 123280600 + Setd5 protein_coding retained_intron MGP_CBAJ_T0078839.1 MGP_CBAJ_G0030778.1 mouse_genomes_project 6 123250572 123328800 + MGP_CBAJ_P0078839 Setd5 protein_coding protein_coding MGP_CBAJ_T0078840.1 MGP_CBAJ_G0030778.1 mouse_genomes_project 6 123250768 123279358 + Setd5 protein_coding processed_transcript MGP_CBAJ_T0078841.1 MGP_CBAJ_G0030778.1 mouse_genomes_project 6 123250809 123290656 + Setd5 protein_coding processed_transcript MGP_CBAJ_T0078842.1 MGP_CBAJ_G0030778.1 mouse_genomes_project 6 123250846 123328794 + MGP_CBAJ_P0078842 Setd5 protein_coding protein_coding MGP_CBAJ_T0078843.1 MGP_CBAJ_G0030778.1 mouse_genomes_project 6 123277973 123311316 + Setd5 protein_coding processed_transcript MGP_CBAJ_T0078844.1 MGP_CBAJ_G0030778.1 mouse_genomes_project 6 123278075 123328793 + MGP_CBAJ_P0078844 Setd5 protein_coding protein_coding MGP_CBAJ_T0078845.1 MGP_CBAJ_G0030778.1 mouse_genomes_project 6 123281911 123290970 + Setd5 protein_coding retained_intron MGP_CBAJ_T0078846.1 MGP_CBAJ_G0030778.1 mouse_genomes_project 6 123282183 123326936 + MGP_CBAJ_P0078846 Setd5 protein_coding unknown_likely_coding MGP_CBAJ_T0078847.1 MGP_CBAJ_G0030778.1 mouse_genomes_project 6 123282903 123327301 + Setd5 protein_coding retained_intron MGP_CBAJ_T0078848.1 MGP_CBAJ_G0030778.1 mouse_genomes_project 6 123283455 123286728 + Setd5 protein_coding retained_intron MGP_CBAJ_T0078849.1 MGP_CBAJ_G0030778.1 mouse_genomes_project 6 123283455 123290625 + Setd5 protein_coding retained_intron MGP_CBAJ_T0078850.1 MGP_CBAJ_G0030778.1 mouse_genomes_project 6 123298386 123303421 + Setd5 protein_coding retained_intron MGP_CBAJ_T0078851.1 MGP_CBAJ_G0030778.1 mouse_genomes_project 6 123300786 123327322 + Setd5 protein_coding retained_intron MGP_CBAJ_T0078852.1 MGP_CBAJ_G0030778.1 mouse_genomes_project 6 123301718 123311552 + Setd5 protein_coding processed_transcript MGP_CBAJ_T0076825.1 MGP_CBAJ_G0030322.1 mouse_genomes_project 6 43637734 43638616 + MGP_CBAJ_P0076825 Tas2r143 protein_coding protein_coding MGP_CBAJ_T0076554.1 MGP_CBAJ_G0030249.1 mouse_genomes_project 6 37295610 37797156 - MGP_CBAJ_P0076554 Dgki protein_coding protein_coding MGP_CBAJ_T0076555.1 MGP_CBAJ_G0030249.1 mouse_genomes_project 6 37296569 37797366 - MGP_CBAJ_P0076555 Dgki protein_coding protein_coding MGP_CBAJ_T0076556.1 MGP_CBAJ_G0030249.1 mouse_genomes_project 6 37296569 37797366 - MGP_CBAJ_P0076556 Dgki protein_coding nonsense_mediated_decay MGP_CBAJ_T0076557.1 MGP_CBAJ_G0030249.1 mouse_genomes_project 6 37296569 37797366 - MGP_CBAJ_P0076557 Dgki protein_coding nonsense_mediated_decay MGP_CBAJ_T0076558.1 MGP_CBAJ_G0030249.1 mouse_genomes_project 6 37296744 37796819 - MGP_CBAJ_P0076558 Dgki protein_coding protein_coding MGP_CBAJ_T0076559.1 MGP_CBAJ_G0030249.1 mouse_genomes_project 6 37369398 37508632 - Dgki protein_coding processed_transcript MGP_CBAJ_T0076560.1 MGP_CBAJ_G0030249.1 mouse_genomes_project 6 37512211 37543663 - Dgki protein_coding processed_transcript MGP_CBAJ_T0076561.1 MGP_CBAJ_G0030249.1 mouse_genomes_project 6 37723366 37796926 - Dgki protein_coding processed_transcript MGP_CBAJ_T0011496.1 MGP_CBAJ_G0009634.1 mouse_genomes_project 6 15919017 15919149 + Gm27755 misc_RNA misc_RNA MGP_CBAJ_T0002530.1 MGP_CBAJ_G0002433.1 mouse_genomes_project 6 42772425 42772474 + MGP_CBAJ_P0002530 Trbj2-3 TR_J_gene TR_J_gene MGP_CBAJ_T0076854.1 MGP_CBAJ_G0030338.1 mouse_genomes_project 6 44200141 44201068 + MGP_CBAJ_P0076854 Olfr446 protein_coding protein_coding MGP_CBAJ_T0080463.1 MGP_CBAJ_G0031135.1 mouse_genomes_project 6 157450437 157603647 - MGP_CBAJ_P0080463 St8sia1 protein_coding protein_coding MGP_CBAJ_T0080464.1 MGP_CBAJ_G0031135.1 mouse_genomes_project 6 157456987 157603336 - MGP_CBAJ_P0080464 St8sia1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080465.1 MGP_CBAJ_G0031135.1 mouse_genomes_project 6 157457616 157519242 - St8sia1 protein_coding processed_transcript MGP_CBAJ_T0015130.1 MGP_CBAJ_G0013242.1 mouse_genomes_project 6 54970376 54970657 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101172.1 MGP_CBAJ_G0039347.1 mouse_genomes_project 6 160296214 160310728 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101173.1 MGP_CBAJ_G0039347.1 mouse_genomes_project 6 160296215 160300861 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101174.1 MGP_CBAJ_G0039347.1 mouse_genomes_project 6 160298928 160300670 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101175.1 MGP_CBAJ_G0039347.1 mouse_genomes_project 6 160300046 160300787 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0001984.1 MGP_CBAJ_G0001900.1 mouse_genomes_project 6 83480142 83484258 - TEC TEC MGP_CBAJ_T0002118.1 MGP_CBAJ_G0002033.1 mouse_genomes_project 6 146225031 146226855 + TEC TEC MGP_CBAJ_T0008476.1 MGP_CBAJ_G0006844.1 mouse_genomes_project 6 50126389 50129646 - lincRNA lincRNA MGP_CBAJ_T0015189.1 MGP_CBAJ_G0013301.1 mouse_genomes_project 6 71831324 71831745 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015168.1 MGP_CBAJ_G0013280.1 mouse_genomes_project 6 69429884 69430294 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008503.1 MGP_CBAJ_G0006864.1 mouse_genomes_project 6 55138198 55148576 + lincRNA lincRNA MGP_CBAJ_T0080183.1 MGP_CBAJ_G0031075.1 mouse_genomes_project 6 148444537 148459322 + MGP_CBAJ_P0080183 Ddx47 protein_coding protein_coding MGP_CBAJ_T0080184.1 MGP_CBAJ_G0031075.1 mouse_genomes_project 6 148444547 148454456 + MGP_CBAJ_P0080184 Ddx47 protein_coding protein_coding MGP_CBAJ_T0080185.1 MGP_CBAJ_G0031075.1 mouse_genomes_project 6 148444549 148454420 + MGP_CBAJ_P0080185 Ddx47 protein_coding protein_coding MGP_CBAJ_T0080186.1 MGP_CBAJ_G0031075.1 mouse_genomes_project 6 148444551 148452048 + Ddx47 protein_coding retained_intron MGP_CBAJ_T0080187.1 MGP_CBAJ_G0031075.1 mouse_genomes_project 6 148444557 148459318 + Ddx47 protein_coding retained_intron MGP_CBAJ_T0080188.1 MGP_CBAJ_G0031075.1 mouse_genomes_project 6 148444558 148453535 + MGP_CBAJ_P0080188 Ddx47 protein_coding protein_coding MGP_CBAJ_T0080189.1 MGP_CBAJ_G0031075.1 mouse_genomes_project 6 148444560 148451045 + Ddx47 protein_coding retained_intron MGP_CBAJ_T0080190.1 MGP_CBAJ_G0031075.1 mouse_genomes_project 6 148444569 148456985 + MGP_CBAJ_P0080190 Ddx47 protein_coding protein_coding MGP_CBAJ_T0080191.1 MGP_CBAJ_G0031075.1 mouse_genomes_project 6 148444578 148457008 + MGP_CBAJ_P0080191 Ddx47 protein_coding protein_coding MGP_CBAJ_T0080192.1 MGP_CBAJ_G0031075.1 mouse_genomes_project 6 148450769 148454485 + Ddx47 protein_coding processed_transcript MGP_CBAJ_T0080193.1 MGP_CBAJ_G0031075.1 mouse_genomes_project 6 148451240 148453953 + Ddx47 protein_coding retained_intron MGP_CBAJ_T0080194.1 MGP_CBAJ_G0031075.1 mouse_genomes_project 6 148454418 148459318 + MGP_CBAJ_P0080194 Ddx47 protein_coding protein_coding MGP_CBAJ_T0008478.1 MGP_CBAJ_G0006846.1 mouse_genomes_project 6 50609817 50610719 - 1700026J14Rik lincRNA lincRNA MGP_CBAJ_T0015324.1 MGP_CBAJ_G0013436.1 mouse_genomes_project 6 124362900 124362976 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101233.1 MGP_CBAJ_G0039380.1 mouse_genomes_project 6 50582055 50608068 + transcribed_unitary_pseudogene processed_transcript MGP_CBAJ_T0101234.1 MGP_CBAJ_G0039380.1 mouse_genomes_project 6 50585758 50603674 + transcribed_unitary_pseudogene transcribed_unitary_pseudogene MGP_CBAJ_T0101235.1 MGP_CBAJ_G0039380.1 mouse_genomes_project 6 50589876 50605740 + transcribed_unitary_pseudogene processed_transcript MGP_CBAJ_T0101236.1 MGP_CBAJ_G0039380.1 mouse_genomes_project 6 50589933 50601748 + transcribed_unitary_pseudogene processed_transcript MGP_CBAJ_T0079644.1 MGP_CBAJ_G0030929.1 mouse_genomes_project 6 136493684 136503403 - MGP_CBAJ_P0079644 Lrrc23 protein_coding protein_coding MGP_CBAJ_T0079645.1 MGP_CBAJ_G0030929.1 mouse_genomes_project 6 136493690 136503412 - MGP_CBAJ_P0079645 Lrrc23 protein_coding protein_coding MGP_CBAJ_T0079646.1 MGP_CBAJ_G0030929.1 mouse_genomes_project 6 136494426 136498292 - Lrrc23 protein_coding retained_intron MGP_CBAJ_T0079647.1 MGP_CBAJ_G0030929.1 mouse_genomes_project 6 136501946 136503402 - MGP_CBAJ_P0079647 Lrrc23 protein_coding protein_coding MGP_CBAJ_T0079648.1 MGP_CBAJ_G0030929.1 mouse_genomes_project 6 136502585 136503389 - MGP_CBAJ_P0079648 Lrrc23 protein_coding protein_coding MGP_CBAJ_T0010650.1 MGP_CBAJ_G0008788.1 mouse_genomes_project 6 75124987 75125097 - Gm24096 miRNA miRNA MGP_CBAJ_T0078580.1 MGP_CBAJ_G0030724.1 mouse_genomes_project 6 99873781 99876371 - MGP_CBAJ_P0078580 Trh protein_coding protein_coding MGP_CBAJ_T0000202.1 MGP_CBAJ_G0000151.1 mouse_genomes_project 6 75835940 75836552 + MGP_CBAJ_P0000202 IG_V_gene IG_V_gene MGP_CBAJ_T0102000.1 MGP_CBAJ_G0040031.1 mouse_genomes_project 6 61893449 61893743 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0002029.1 MGP_CBAJ_G0001945.1 mouse_genomes_project 6 95304470 95305514 - TEC TEC MGP_CBAJ_T0079945.1 MGP_CBAJ_G0030987.1 mouse_genomes_project 6 140639641 140674024 + MGP_CBAJ_P0079945 Gm44596 protein_coding protein_coding MGP_CBAJ_T0078247.1 MGP_CBAJ_G0030656.1 mouse_genomes_project 6 94730909 94770791 - Arhgap25 protein_coding retained_intron MGP_CBAJ_T0078248.1 MGP_CBAJ_G0030656.1 mouse_genomes_project 6 94730909 94807763 - MGP_CBAJ_P0078248 Arhgap25 protein_coding protein_coding MGP_CBAJ_T0078249.1 MGP_CBAJ_G0030656.1 mouse_genomes_project 6 94731775 94770572 - MGP_CBAJ_P0078249 Arhgap25 protein_coding protein_coding MGP_CBAJ_T0078250.1 MGP_CBAJ_G0030656.1 mouse_genomes_project 6 94732499 94736023 - Arhgap25 protein_coding retained_intron MGP_CBAJ_T0004896.1 MGP_CBAJ_G0004196.1 mouse_genomes_project 6 78190172 78197364 + Gm15401 antisense antisense MGP_CBAJ_T0004897.1 MGP_CBAJ_G0004196.1 mouse_genomes_project 6 78190721 78198247 + Gm15401 antisense antisense MGP_CBAJ_T0004898.1 MGP_CBAJ_G0004196.1 mouse_genomes_project 6 78197132 78198598 + Gm15401 antisense antisense MGP_CBAJ_T0001895.1 MGP_CBAJ_G0001811.1 mouse_genomes_project 6 22155879 22158080 + TEC TEC MGP_CBAJ_T0077787.1 MGP_CBAJ_G0030570.1 mouse_genomes_project 6 89027622 89030653 + Tacr1 protein_coding retained_intron MGP_CBAJ_T0077788.1 MGP_CBAJ_G0030570.1 mouse_genomes_project 6 89027763 89196902 + MGP_CBAJ_P0077788 Tacr1 protein_coding protein_coding MGP_CBAJ_T0077789.1 MGP_CBAJ_G0030570.1 mouse_genomes_project 6 89028075 89196907 + MGP_CBAJ_P0077789 Tacr1 protein_coding protein_coding MGP_CBAJ_T0078703.1 MGP_CBAJ_G0030747.1 mouse_genomes_project 6 107703295 108187312 - MGP_CBAJ_P0078703 Gm20696 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078706.1 MGP_CBAJ_G0030747.1 mouse_genomes_project 6 107907942 107922043 - Gm20696 protein_coding retained_intron MGP_CBAJ_T0078707.1 MGP_CBAJ_G0030747.1 mouse_genomes_project 6 107907973 108152850 - Gm20696 protein_coding retained_intron MGP_CBAJ_T0102033.1 MGP_CBAJ_G0040063.1 mouse_genomes_project 6 143873261 143893555 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0080093.1 MGP_CBAJ_G0031033.1 mouse_genomes_project 6 144253139 144276775 - MGP_CBAJ_P0080093 Ybx3 protein_coding protein_coding MGP_CBAJ_T0080094.1 MGP_CBAJ_G0031033.1 mouse_genomes_project 6 144253139 144276737 - MGP_CBAJ_P0080094 Ybx3 protein_coding protein_coding MGP_CBAJ_T0080095.1 MGP_CBAJ_G0031033.1 mouse_genomes_project 6 144253374 144266563 - Ybx3 protein_coding processed_transcript MGP_CBAJ_T0080096.1 MGP_CBAJ_G0031033.1 mouse_genomes_project 6 144253384 144257288 - Ybx3 protein_coding retained_intron MGP_CBAJ_T0080097.1 MGP_CBAJ_G0031033.1 mouse_genomes_project 6 144264476 144266824 - Ybx3 protein_coding processed_transcript MGP_CBAJ_T0015029.1 MGP_CBAJ_G0013141.1 mouse_genomes_project 6 10512577 10513564 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015336.1 MGP_CBAJ_G0013448.1 mouse_genomes_project 6 127549382 127549812 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099421.1 MGP_CBAJ_G0037676.1 mouse_genomes_project 6 29673018 29673125 + Gm24536 snRNA snRNA MGP_CBAJ_T0077646.1 MGP_CBAJ_G0030540.1 mouse_genomes_project 6 77867126 77871461 + MGP_CBAJ_P0077646 Tmem150a protein_coding protein_coding MGP_CBAJ_T0077647.1 MGP_CBAJ_G0030540.1 mouse_genomes_project 6 77867126 77871461 + MGP_CBAJ_P0077647 Tmem150a protein_coding protein_coding MGP_CBAJ_T0077648.1 MGP_CBAJ_G0030540.1 mouse_genomes_project 6 77867153 77870100 + MGP_CBAJ_P0077648 Tmem150a protein_coding protein_coding MGP_CBAJ_T0077649.1 MGP_CBAJ_G0030540.1 mouse_genomes_project 6 77867821 77871000 + Tmem150a protein_coding processed_transcript MGP_CBAJ_T0077650.1 MGP_CBAJ_G0030540.1 mouse_genomes_project 6 77867918 77870451 + MGP_CBAJ_P0077650 Tmem150a protein_coding protein_coding MGP_CBAJ_T0079466.1 MGP_CBAJ_G0030886.1 mouse_genomes_project 6 133706435 133725739 - MGP_CBAJ_P0079466 Phc1 protein_coding protein_coding MGP_CBAJ_T0079467.1 MGP_CBAJ_G0030886.1 mouse_genomes_project 6 133706435 133725739 - MGP_CBAJ_P0079467 Phc1 protein_coding protein_coding MGP_CBAJ_T0079468.1 MGP_CBAJ_G0030886.1 mouse_genomes_project 6 133706442 133728376 - MGP_CBAJ_P0079468 Phc1 protein_coding protein_coding MGP_CBAJ_T0079469.1 MGP_CBAJ_G0030886.1 mouse_genomes_project 6 133706454 133728376 - MGP_CBAJ_P0079469 Phc1 protein_coding protein_coding MGP_CBAJ_T0079470.1 MGP_CBAJ_G0030886.1 mouse_genomes_project 6 133706454 133727590 - MGP_CBAJ_P0079470 Phc1 protein_coding protein_coding MGP_CBAJ_T0079471.1 MGP_CBAJ_G0030886.1 mouse_genomes_project 6 133706554 133728372 - MGP_CBAJ_P0079471 Phc1 protein_coding protein_coding MGP_CBAJ_T0079472.1 MGP_CBAJ_G0030886.1 mouse_genomes_project 6 133707007 133728339 - Phc1 protein_coding retained_intron MGP_CBAJ_T0079473.1 MGP_CBAJ_G0030886.1 mouse_genomes_project 6 133707007 133728339 - MGP_CBAJ_P0079473 Phc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079474.1 MGP_CBAJ_G0030886.1 mouse_genomes_project 6 133707008 133731000 - MGP_CBAJ_P0079474 Phc1 protein_coding protein_coding MGP_CBAJ_T0079475.1 MGP_CBAJ_G0030886.1 mouse_genomes_project 6 133714256 133725643 - MGP_CBAJ_P0079475 Phc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079476.1 MGP_CBAJ_G0030886.1 mouse_genomes_project 6 133714648 133730945 - MGP_CBAJ_P0079476 Phc1 protein_coding protein_coding MGP_CBAJ_T0079477.1 MGP_CBAJ_G0030886.1 mouse_genomes_project 6 133721394 133723868 - Phc1 protein_coding retained_intron MGP_CBAJ_T0079478.1 MGP_CBAJ_G0030886.1 mouse_genomes_project 6 133722117 133730663 - MGP_CBAJ_P0079478 Phc1 protein_coding protein_coding MGP_CBAJ_T0079479.1 MGP_CBAJ_G0030886.1 mouse_genomes_project 6 133722856 133728376 - MGP_CBAJ_P0079479 Phc1 protein_coding protein_coding MGP_CBAJ_T0079480.1 MGP_CBAJ_G0030886.1 mouse_genomes_project 6 133722857 133726020 - MGP_CBAJ_P0079480 Phc1 protein_coding protein_coding MGP_CBAJ_T0079481.1 MGP_CBAJ_G0030886.1 mouse_genomes_project 6 133722861 133728354 - MGP_CBAJ_P0079481 Phc1 protein_coding protein_coding MGP_CBAJ_T0077267.1 MGP_CBAJ_G0030435.1 mouse_genomes_project 6 57884516 57896748 - MGP_CBAJ_P0077267 Ggct protein_coding protein_coding MGP_CBAJ_T0077268.1 MGP_CBAJ_G0030435.1 mouse_genomes_project 6 57887609 57896505 - Ggct protein_coding processed_transcript MGP_CBAJ_T0077269.1 MGP_CBAJ_G0030435.1 mouse_genomes_project 6 57887893 57896659 - MGP_CBAJ_P0077269 Ggct protein_coding nonsense_mediated_decay MGP_CBAJ_T0077270.1 MGP_CBAJ_G0030435.1 mouse_genomes_project 6 57887917 57896661 - MGP_CBAJ_P0077270 Ggct protein_coding protein_coding MGP_CBAJ_T0077271.1 MGP_CBAJ_G0030435.1 mouse_genomes_project 6 57888442 57896661 - Ggct protein_coding retained_intron MGP_CBAJ_T0077272.1 MGP_CBAJ_G0030435.1 mouse_genomes_project 6 57892923 57896422 - Ggct protein_coding retained_intron MGP_CBAJ_T0004835.1 MGP_CBAJ_G0004147.1 mouse_genomes_project 6 28930655 28931061 - Gm17172 antisense antisense MGP_CBAJ_T0001995.1 MGP_CBAJ_G0001911.1 mouse_genomes_project 6 86636505 86638261 + TEC TEC MGP_CBAJ_T0079855.1 MGP_CBAJ_G0030967.1 mouse_genomes_project 6 138691575 138728629 - MGP_CBAJ_P0079855 Kcna6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079856.1 MGP_CBAJ_G0030967.1 mouse_genomes_project 6 138691577 138724778 - Kcna6 protein_coding processed_transcript MGP_CBAJ_T0079857.1 MGP_CBAJ_G0030967.1 mouse_genomes_project 6 138691578 138728641 - MGP_CBAJ_P0079857 Kcna6 protein_coding protein_coding MGP_CBAJ_T0079858.1 MGP_CBAJ_G0030967.1 mouse_genomes_project 6 138724654 138728118 - MGP_CBAJ_P0079858 Kcna6 protein_coding protein_coding MGP_CBAJ_T0004988.1 MGP_CBAJ_G0004251.1 mouse_genomes_project 6 126573830 126598261 + Gm20404 antisense antisense MGP_CBAJ_T0079402.1 MGP_CBAJ_G0030873.1 mouse_genomes_project 6 131957516 131990806 + Bcl2l13 protein_coding retained_intron MGP_CBAJ_T0079403.1 MGP_CBAJ_G0030873.1 mouse_genomes_project 6 131957516 131988554 + MGP_CBAJ_P0079403 Bcl2l13 protein_coding protein_coding MGP_CBAJ_T0079404.1 MGP_CBAJ_G0030873.1 mouse_genomes_project 6 131957530 132004347 + MGP_CBAJ_P0079404 Bcl2l13 protein_coding protein_coding MGP_CBAJ_T0079405.1 MGP_CBAJ_G0030873.1 mouse_genomes_project 6 131957542 132024072 + MGP_CBAJ_P0079405 Bcl2l13 protein_coding protein_coding MGP_CBAJ_T0100653.1 MGP_CBAJ_G0038908.1 mouse_genomes_project 6 24159583 24159715 - Gm24443 snoRNA snoRNA MGP_CBAJ_T0004901.1 MGP_CBAJ_G0004199.1 mouse_genomes_project 6 86217751 86312880 - Gm4409 antisense antisense MGP_CBAJ_T0001921.1 MGP_CBAJ_G0001837.1 mouse_genomes_project 6 44654351 44654979 + TEC TEC MGP_CBAJ_T0015178.1 MGP_CBAJ_G0013290.1 mouse_genomes_project 6 70730461 70730687 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015063.1 MGP_CBAJ_G0013175.1 mouse_genomes_project 6 26119154 26119896 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0080108.1 MGP_CBAJ_G0031044.1 mouse_genomes_project 6 145736972 145739301 - A630073D07Rik protein_coding processed_transcript MGP_CBAJ_T0080109.1 MGP_CBAJ_G0031044.1 mouse_genomes_project 6 145736972 145739353 - MGP_CBAJ_P0080109 A630073D07Rik protein_coding protein_coding MGP_CBAJ_T0080388.1 MGP_CBAJ_G0031114.1 mouse_genomes_project 6 155141363 155186915 + MGP_CBAJ_P0080388 Gm11077 protein_coding protein_coding MGP_CBAJ_T0080618.1 MGP_CBAJ_G0031157.1 mouse_genomes_project 6 161928598 162017163 + MGP_CBAJ_P0080618 Ppfibp1 protein_coding protein_coding MGP_CBAJ_T0080621.1 MGP_CBAJ_G0031157.1 mouse_genomes_project 6 162015581 162031899 + MGP_CBAJ_P0080621 Ppfibp1 protein_coding protein_coding MGP_CBAJ_T0080622.1 MGP_CBAJ_G0031157.1 mouse_genomes_project 6 162015737 162076822 + MGP_CBAJ_P0080622 Ppfibp1 protein_coding protein_coding MGP_CBAJ_T0080623.1 MGP_CBAJ_G0031157.1 mouse_genomes_project 6 162031943 162047833 + MGP_CBAJ_P0080623 Ppfibp1 protein_coding protein_coding MGP_CBAJ_T0080624.1 MGP_CBAJ_G0031157.1 mouse_genomes_project 6 162038362 162044075 + Ppfibp1 protein_coding processed_transcript MGP_CBAJ_T0080625.1 MGP_CBAJ_G0031157.1 mouse_genomes_project 6 162041379 162076814 + Ppfibp1 protein_coding retained_intron MGP_CBAJ_T0080626.1 MGP_CBAJ_G0031157.1 mouse_genomes_project 6 162042148 162062224 + Ppfibp1 protein_coding retained_intron MGP_CBAJ_T0080627.1 MGP_CBAJ_G0031157.1 mouse_genomes_project 6 162043519 162047861 + Ppfibp1 protein_coding retained_intron MGP_CBAJ_T0080628.1 MGP_CBAJ_G0031157.1 mouse_genomes_project 6 162044068 162063961 + MGP_CBAJ_P0080628 Ppfibp1 protein_coding protein_coding MGP_CBAJ_T0080629.1 MGP_CBAJ_G0031157.1 mouse_genomes_project 6 162046936 162048191 + Ppfibp1 protein_coding retained_intron MGP_CBAJ_T0080630.1 MGP_CBAJ_G0031157.1 mouse_genomes_project 6 162055666 162064368 + MGP_CBAJ_P0080630 Ppfibp1 protein_coding protein_coding MGP_CBAJ_T0015292.1 MGP_CBAJ_G0013404.1 mouse_genomes_project 6 109872837 109873077 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0076434.1 MGP_CBAJ_G0030227.1 mouse_genomes_project 6 33311506 34096077 + MGP_CBAJ_P0076434 Exoc4 protein_coding protein_coding MGP_CBAJ_T0076435.1 MGP_CBAJ_G0030227.1 mouse_genomes_project 6 33311549 33424522 + Exoc4 protein_coding retained_intron MGP_CBAJ_T0076436.1 MGP_CBAJ_G0030227.1 mouse_genomes_project 6 33311549 33929904 + Exoc4 protein_coding processed_transcript MGP_CBAJ_T0076437.1 MGP_CBAJ_G0030227.1 mouse_genomes_project 6 33311549 33564501 + MGP_CBAJ_P0076437 Exoc4 protein_coding protein_coding MGP_CBAJ_T0076438.1 MGP_CBAJ_G0030227.1 mouse_genomes_project 6 33311553 33680405 + MGP_CBAJ_P0076438 Exoc4 protein_coding protein_coding MGP_CBAJ_T0076439.1 MGP_CBAJ_G0030227.1 mouse_genomes_project 6 33311557 33386496 + Exoc4 protein_coding processed_transcript MGP_CBAJ_T0076440.1 MGP_CBAJ_G0030227.1 mouse_genomes_project 6 33401045 33591343 + Exoc4 protein_coding processed_transcript MGP_CBAJ_T0076441.1 MGP_CBAJ_G0030227.1 mouse_genomes_project 6 33402107 33421684 + Exoc4 protein_coding retained_intron MGP_CBAJ_T0076442.1 MGP_CBAJ_G0030227.1 mouse_genomes_project 6 33800417 33979952 + Exoc4 protein_coding processed_transcript MGP_CBAJ_T0076443.1 MGP_CBAJ_G0030227.1 mouse_genomes_project 6 33979891 33991681 + Exoc4 protein_coding processed_transcript MGP_CBAJ_T0000177.1 MGP_CBAJ_G0000133.1 mouse_genomes_project 6 73647501 73647967 - MGP_CBAJ_P0000177 Igkv13-84 IG_V_gene IG_V_gene MGP_CBAJ_T0076862.1 MGP_CBAJ_G0030344.1 mouse_genomes_project 6 44535722 44536664 + MGP_CBAJ_P0076862 Olfr435 protein_coding protein_coding MGP_CBAJ_T0098069.1 MGP_CBAJ_G0036342.1 mouse_genomes_project 6 10380573 10380693 + n-R5s160 rRNA rRNA MGP_CBAJ_T0015172.1 MGP_CBAJ_G0013284.1 mouse_genomes_project 6 70003471 70003858 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008532.1 MGP_CBAJ_G0006890.1 mouse_genomes_project 6 81881379 81886971 - Gm44113 lincRNA lincRNA MGP_CBAJ_T0010687.1 MGP_CBAJ_G0008825.1 mouse_genomes_project 6 136857269 136857332 + Mir7045 miRNA miRNA MGP_CBAJ_T0010637.1 MGP_CBAJ_G0008775.1 mouse_genomes_project 6 37145432 37145579 + Gm25111 miRNA miRNA MGP_CBAJ_T0075842.1 MGP_CBAJ_G0030117.1 mouse_genomes_project 6 4711045 4719035 + MGP_CBAJ_P0075842 Tac1 protein_coding protein_coding MGP_CBAJ_T0075843.1 MGP_CBAJ_G0030117.1 mouse_genomes_project 6 4711110 4719040 + MGP_CBAJ_P0075843 Tac1 protein_coding protein_coding MGP_CBAJ_T0075844.1 MGP_CBAJ_G0030117.1 mouse_genomes_project 6 4711241 4719034 + MGP_CBAJ_P0075844 Tac1 protein_coding protein_coding MGP_CBAJ_T0075845.1 MGP_CBAJ_G0030117.1 mouse_genomes_project 6 4718425 4721894 + Tac1 protein_coding processed_transcript MGP_CBAJ_T0002147.1 MGP_CBAJ_G0002062.1 mouse_genomes_project 6 163423958 163427437 + TEC TEC MGP_CBAJ_T0015267.1 MGP_CBAJ_G0013379.1 mouse_genomes_project 6 99904701 99904857 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008676.1 MGP_CBAJ_G0006998.1 mouse_genomes_project 6 162845401 162865883 + lincRNA lincRNA MGP_CBAJ_T0008677.1 MGP_CBAJ_G0006998.1 mouse_genomes_project 6 162849897 162865857 + lincRNA lincRNA MGP_CBAJ_T0015017.1 MGP_CBAJ_G0013129.1 mouse_genomes_project 6 4792501 4793138 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0078463.1 MGP_CBAJ_G0030704.1 mouse_genomes_project 6 97948027 97960695 + MGP_CBAJ_P0078463 Klf15 protein_coding protein_coding MGP_CBAJ_T0078464.1 MGP_CBAJ_G0030704.1 mouse_genomes_project 6 97948125 97960695 + MGP_CBAJ_P0078464 Klf15 protein_coding protein_coding MGP_CBAJ_T0078465.1 MGP_CBAJ_G0030704.1 mouse_genomes_project 6 97950755 97960692 + MGP_CBAJ_P0078465 Klf15 protein_coding protein_coding MGP_CBAJ_T0078466.1 MGP_CBAJ_G0030704.1 mouse_genomes_project 6 97951851 97960692 + MGP_CBAJ_P0078466 Klf15 protein_coding protein_coding MGP_CBAJ_T0078467.1 MGP_CBAJ_G0030704.1 mouse_genomes_project 6 97952569 97960677 + MGP_CBAJ_P0078467 Klf15 protein_coding protein_coding MGP_CBAJ_T0077533.1 MGP_CBAJ_G0030516.1 mouse_genomes_project 6 75939260 75972903 - MGP_CBAJ_P0077533 Rpia protein_coding protein_coding MGP_CBAJ_T0077534.1 MGP_CBAJ_G0030516.1 mouse_genomes_project 6 75939813 75952769 - Rpia protein_coding retained_intron MGP_CBAJ_T0077535.1 MGP_CBAJ_G0030516.1 mouse_genomes_project 6 75962929 75972674 - Rpia protein_coding retained_intron MGP_CBAJ_T0080242.1 MGP_CBAJ_G0031087.1 mouse_genomes_project 6 150393389 150496038 - MGP_CBAJ_P0080242 Gucy2c protein_coding protein_coding MGP_CBAJ_T0080243.1 MGP_CBAJ_G0031087.1 mouse_genomes_project 6 150393390 150496015 - MGP_CBAJ_P0080243 Gucy2c protein_coding protein_coding MGP_CBAJ_T0076278.1 MGP_CBAJ_G0030204.1 mouse_genomes_project 6 29420120 29422615 + Smo protein_coding retained_intron MGP_CBAJ_T0076279.1 MGP_CBAJ_G0030204.1 mouse_genomes_project 6 29420305 29463156 + MGP_CBAJ_P0076279 Smo protein_coding protein_coding MGP_CBAJ_T0000272.1 MGP_CBAJ_G0000217.1 mouse_genomes_project 6 72969432 72969901 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0015436.1 MGP_CBAJ_G0013548.1 mouse_genomes_project 6 157800714 157800917 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000257.1 MGP_CBAJ_G0000202.1 mouse_genomes_project 6 72046313 72046610 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0001970.1 MGP_CBAJ_G0001886.1 mouse_genomes_project 6 77186145 77187407 + TEC TEC MGP_CBAJ_T0015033.1 MGP_CBAJ_G0013145.1 mouse_genomes_project 6 11810399 11810753 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0080111.1 MGP_CBAJ_G0031046.1 mouse_genomes_project 6 145799067 145799997 - MGP_CBAJ_P0080111 Tas2r122 protein_coding protein_coding MGP_CBAJ_T0002617.1 MGP_CBAJ_G0002505.1 mouse_genomes_project 6 42216749 42217211 + MGP_CBAJ_P0002617 Trbv13-1 TR_V_gene TR_V_gene MGP_CBAJ_T0002618.1 MGP_CBAJ_G0002505.1 mouse_genomes_project 6 42216778 42217211 + MGP_CBAJ_P0002618 Trbv13-1 TR_V_gene TR_V_gene MGP_CBAJ_T0102008.1 MGP_CBAJ_G0040039.1 mouse_genomes_project 6 79073328 79074232 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0079625.1 MGP_CBAJ_G0030927.1 mouse_genomes_project 6 136465591 136479385 - MGP_CBAJ_P0079625 Atn1 protein_coding protein_coding MGP_CBAJ_T0079626.1 MGP_CBAJ_G0030927.1 mouse_genomes_project 6 136468219 136468673 - Atn1 protein_coding processed_transcript MGP_CBAJ_T0079627.1 MGP_CBAJ_G0030927.1 mouse_genomes_project 6 136470766 136479102 - MGP_CBAJ_P0079627 Atn1 protein_coding protein_coding MGP_CBAJ_T0000193.1 MGP_CBAJ_G0000144.1 mouse_genomes_project 6 75020328 75020895 - MGP_CBAJ_P0000193 Igkv8-34 IG_V_gene IG_V_gene MGP_CBAJ_T0015082.1 MGP_CBAJ_G0013194.1 mouse_genomes_project 6 40546797 40547313 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098440.1 MGP_CBAJ_G0036702.1 mouse_genomes_project 6 98297761 98298076 - sense_intronic sense_intronic MGP_CBAJ_T0077002.1 MGP_CBAJ_G0030375.1 mouse_genomes_project 6 50781271 50788605 + MGP_CBAJ_P0077002 Gimap4 protein_coding protein_coding MGP_CBAJ_T0077003.1 MGP_CBAJ_G0030375.1 mouse_genomes_project 6 50781300 50789287 + MGP_CBAJ_P0077003 Gimap4 protein_coding protein_coding MGP_CBAJ_T0077004.1 MGP_CBAJ_G0030375.1 mouse_genomes_project 6 50781300 50789287 + MGP_CBAJ_P0077004 Gimap4 protein_coding protein_coding MGP_CBAJ_T0077005.1 MGP_CBAJ_G0030375.1 mouse_genomes_project 6 50781303 50789104 + MGP_CBAJ_P0077005 Gimap4 protein_coding protein_coding MGP_CBAJ_T0077006.1 MGP_CBAJ_G0030375.1 mouse_genomes_project 6 50781303 50789284 + MGP_CBAJ_P0077006 Gimap4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077007.1 MGP_CBAJ_G0030375.1 mouse_genomes_project 6 50781304 50789287 + MGP_CBAJ_P0077007 Gimap4 protein_coding protein_coding MGP_CBAJ_T0015243.1 MGP_CBAJ_G0013355.1 mouse_genomes_project 6 90648701 90649248 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008641.1 MGP_CBAJ_G0006975.1 mouse_genomes_project 6 147976703 147979138 - Gm43949 lincRNA lincRNA MGP_CBAJ_T0079018.1 MGP_CBAJ_G0030808.1 mouse_genomes_project 6 124975778 125007297 + MGP_CBAJ_P0079018 Atg7 protein_coding protein_coding MGP_CBAJ_T0079019.1 MGP_CBAJ_G0030808.1 mouse_genomes_project 6 124977163 125003316 + MGP_CBAJ_P0079019 Atg7 protein_coding protein_coding MGP_CBAJ_T0079020.1 MGP_CBAJ_G0030808.1 mouse_genomes_project 6 124977163 125213206 + MGP_CBAJ_P0079020 Atg7 protein_coding protein_coding MGP_CBAJ_T0079021.1 MGP_CBAJ_G0030808.1 mouse_genomes_project 6 124979106 125013827 + MGP_CBAJ_P0079021 Atg7 protein_coding protein_coding MGP_CBAJ_T0079022.1 MGP_CBAJ_G0030808.1 mouse_genomes_project 6 124982701 125015500 + MGP_CBAJ_P0079022 Atg7 protein_coding protein_coding MGP_CBAJ_T0079023.1 MGP_CBAJ_G0030808.1 mouse_genomes_project 6 124988256 125003904 + MGP_CBAJ_P0079023 Atg7 protein_coding protein_coding MGP_CBAJ_T0079024.1 MGP_CBAJ_G0030808.1 mouse_genomes_project 6 125001279 125214588 + MGP_CBAJ_P0079024 Atg7 protein_coding protein_coding MGP_CBAJ_T0079025.1 MGP_CBAJ_G0030808.1 mouse_genomes_project 6 125001279 125213209 + MGP_CBAJ_P0079025 Atg7 protein_coding protein_coding MGP_CBAJ_T0079026.1 MGP_CBAJ_G0030808.1 mouse_genomes_project 6 125002992 125015517 + MGP_CBAJ_P0079026 Atg7 protein_coding protein_coding MGP_CBAJ_T0079027.1 MGP_CBAJ_G0030808.1 mouse_genomes_project 6 125003174 125014223 + Atg7 protein_coding retained_intron MGP_CBAJ_T0079028.1 MGP_CBAJ_G0030808.1 mouse_genomes_project 6 125003174 125213115 + MGP_CBAJ_P0079028 Atg7 protein_coding protein_coding MGP_CBAJ_T0079029.1 MGP_CBAJ_G0030808.1 mouse_genomes_project 6 125003174 125214590 + MGP_CBAJ_P0079029 Atg7 protein_coding protein_coding MGP_CBAJ_T0079030.1 MGP_CBAJ_G0030808.1 mouse_genomes_project 6 125003174 125213215 + MGP_CBAJ_P0079030 Atg7 protein_coding protein_coding MGP_CBAJ_T0079031.1 MGP_CBAJ_G0030808.1 mouse_genomes_project 6 125009462 125032521 + Atg7 protein_coding processed_transcript MGP_CBAJ_T0079032.1 MGP_CBAJ_G0030808.1 mouse_genomes_project 6 125012589 125014788 + Atg7 protein_coding retained_intron MGP_CBAJ_T0079033.1 MGP_CBAJ_G0030808.1 mouse_genomes_project 6 125058512 125213209 + Atg7 protein_coding processed_transcript MGP_CBAJ_T0079034.1 MGP_CBAJ_G0030808.1 mouse_genomes_project 6 125210130 125213207 + Atg7 protein_coding processed_transcript MGP_CBAJ_T0078905.1 MGP_CBAJ_G0030786.1 mouse_genomes_project 6 123591668 123604131 + MGP_CBAJ_P0078905 Arpc4 protein_coding protein_coding MGP_CBAJ_T0078906.1 MGP_CBAJ_G0030786.1 mouse_genomes_project 6 123591761 123602461 + MGP_CBAJ_P0078906 Arpc4 protein_coding protein_coding MGP_CBAJ_T0079173.1 MGP_CBAJ_G0030833.1 mouse_genomes_project 6 126924830 126989100 - MGP_CBAJ_P0079173 Alox5 protein_coding protein_coding MGP_CBAJ_T0079174.1 MGP_CBAJ_G0030833.1 mouse_genomes_project 6 126925034 126989053 - Alox5 protein_coding retained_intron MGP_CBAJ_T0079175.1 MGP_CBAJ_G0030833.1 mouse_genomes_project 6 126925036 126927535 - Alox5 protein_coding retained_intron MGP_CBAJ_T0079176.1 MGP_CBAJ_G0030833.1 mouse_genomes_project 6 126925367 126988946 - MGP_CBAJ_P0079176 Alox5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079177.1 MGP_CBAJ_G0030833.1 mouse_genomes_project 6 126925479 126988946 - MGP_CBAJ_P0079177 Alox5 protein_coding protein_coding MGP_CBAJ_T0079178.1 MGP_CBAJ_G0030833.1 mouse_genomes_project 6 126925479 126988946 - MGP_CBAJ_P0079178 Alox5 protein_coding protein_coding MGP_CBAJ_T0079179.1 MGP_CBAJ_G0030833.1 mouse_genomes_project 6 126927339 126928788 - Alox5 protein_coding retained_intron MGP_CBAJ_T0079180.1 MGP_CBAJ_G0030833.1 mouse_genomes_project 6 126930222 126944460 - Alox5 protein_coding processed_transcript MGP_CBAJ_T0101357.1 MGP_CBAJ_G0039436.1 mouse_genomes_project 6 142992177 143005567 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101358.1 MGP_CBAJ_G0039436.1 mouse_genomes_project 6 142992485 143005576 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0002074.1 MGP_CBAJ_G0001990.1 mouse_genomes_project 6 112549703 112553295 + TEC TEC MGP_CBAJ_T0000267.1 MGP_CBAJ_G0000212.1 mouse_genomes_project 6 72800963 72801727 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0076778.1 MGP_CBAJ_G0030310.1 mouse_genomes_project 6 43200245 43204714 + MGP_CBAJ_P0076778 Sval1 protein_coding protein_coding MGP_CBAJ_T0015408.1 MGP_CBAJ_G0013520.1 mouse_genomes_project 6 145597395 145597828 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101365.1 MGP_CBAJ_G0039441.1 mouse_genomes_project 6 146742209 146745786 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101366.1 MGP_CBAJ_G0039441.1 mouse_genomes_project 6 146742242 146744515 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0078290.1 MGP_CBAJ_G0030665.1 mouse_genomes_project 6 95195974 95221693 + MGP_CBAJ_P0078290 Copg1 protein_coding protein_coding MGP_CBAJ_T0078291.1 MGP_CBAJ_G0030665.1 mouse_genomes_project 6 95196088 95198920 + MGP_CBAJ_P0078291 Copg1 protein_coding protein_coding MGP_CBAJ_T0078292.1 MGP_CBAJ_G0030665.1 mouse_genomes_project 6 95196100 95201968 + Copg1 protein_coding processed_transcript MGP_CBAJ_T0078293.1 MGP_CBAJ_G0030665.1 mouse_genomes_project 6 95196117 95203123 + Copg1 protein_coding retained_intron MGP_CBAJ_T0078294.1 MGP_CBAJ_G0030665.1 mouse_genomes_project 6 95202103 95210515 + Copg1 protein_coding retained_intron MGP_CBAJ_T0078295.1 MGP_CBAJ_G0030665.1 mouse_genomes_project 6 95203276 95204263 + Copg1 protein_coding retained_intron MGP_CBAJ_T0078296.1 MGP_CBAJ_G0030665.1 mouse_genomes_project 6 95203616 95213028 + Copg1 protein_coding retained_intron MGP_CBAJ_T0078297.1 MGP_CBAJ_G0030665.1 mouse_genomes_project 6 95204157 95220628 + Copg1 protein_coding retained_intron MGP_CBAJ_T0078298.1 MGP_CBAJ_G0030665.1 mouse_genomes_project 6 95205963 95210927 + Copg1 protein_coding retained_intron MGP_CBAJ_T0078299.1 MGP_CBAJ_G0030665.1 mouse_genomes_project 6 95216884 95218167 + Copg1 protein_coding processed_transcript MGP_CBAJ_T0015385.1 MGP_CBAJ_G0013497.1 mouse_genomes_project 6 140983660 140984150 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100706.1 MGP_CBAJ_G0038961.1 mouse_genomes_project 6 136019756 136019888 - Gm25311 snoRNA snoRNA MGP_CBAJ_T0076733.1 MGP_CBAJ_G0030289.1 mouse_genomes_project 6 41641208 41642204 - MGP_CBAJ_P0076733 Tas2r138 protein_coding protein_coding MGP_CBAJ_T0101974.1 MGP_CBAJ_G0040005.1 mouse_genomes_project 6 34552884 34553863 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0008509.1 MGP_CBAJ_G0006869.1 mouse_genomes_project 6 58619838 58629842 + Gm3279 lincRNA lincRNA MGP_CBAJ_T0078445.1 MGP_CBAJ_G0030699.1 mouse_genomes_project 6 97782740 97786965 + MGP_CBAJ_P0078445 BC048671 protein_coding protein_coding MGP_CBAJ_T0078446.1 MGP_CBAJ_G0030699.1 mouse_genomes_project 6 97783637 97786965 + MGP_CBAJ_P0078446 BC048671 protein_coding protein_coding MGP_CBAJ_T0080614.1 MGP_CBAJ_G0031156.1 mouse_genomes_project 6 161880618 161911426 + MGP_CBAJ_P0080614 Smco2 protein_coding protein_coding MGP_CBAJ_T0080615.1 MGP_CBAJ_G0031156.1 mouse_genomes_project 6 161880671 161889770 + Smco2 protein_coding retained_intron MGP_CBAJ_T0080616.1 MGP_CBAJ_G0031156.1 mouse_genomes_project 6 161890455 161902085 + Smco2 protein_coding processed_transcript MGP_CBAJ_T0080617.1 MGP_CBAJ_G0031156.1 mouse_genomes_project 6 161897539 161908182 + Smco2 protein_coding processed_transcript MGP_CBAJ_T0015271.1 MGP_CBAJ_G0013383.1 mouse_genomes_project 6 101462148 101463022 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0075846.1 MGP_CBAJ_G0030118.1 mouse_genomes_project 6 4827313 4846116 - MGP_CBAJ_P0075846 Asns protein_coding protein_coding MGP_CBAJ_T0075847.1 MGP_CBAJ_G0030118.1 mouse_genomes_project 6 4827313 4845733 - MGP_CBAJ_P0075847 Asns protein_coding protein_coding MGP_CBAJ_T0075848.1 MGP_CBAJ_G0030118.1 mouse_genomes_project 6 4827614 4829540 - Asns protein_coding processed_transcript MGP_CBAJ_T0075849.1 MGP_CBAJ_G0030118.1 mouse_genomes_project 6 4833432 4835226 - Asns protein_coding retained_intron MGP_CBAJ_T0075850.1 MGP_CBAJ_G0030118.1 mouse_genomes_project 6 4835140 4845972 - MGP_CBAJ_P0075850 Asns protein_coding protein_coding MGP_CBAJ_T0075851.1 MGP_CBAJ_G0030118.1 mouse_genomes_project 6 4838049 4845084 - MGP_CBAJ_P0075851 Asns protein_coding protein_coding MGP_CBAJ_T0075852.1 MGP_CBAJ_G0030118.1 mouse_genomes_project 6 4838141 4845734 - MGP_CBAJ_P0075852 Asns protein_coding protein_coding MGP_CBAJ_T0004893.1 MGP_CBAJ_G0004194.1 mouse_genomes_project 6 77578939 77581924 - 4933431G14Rik antisense antisense MGP_CBAJ_T0004894.1 MGP_CBAJ_G0004194.1 mouse_genomes_project 6 77578939 77581667 - 4933431G14Rik antisense antisense MGP_CBAJ_T0076829.1 MGP_CBAJ_G0030326.1 mouse_genomes_project 6 43723920 43724787 - MGP_CBAJ_P0076829 Olfr458 protein_coding protein_coding MGP_CBAJ_T0077495.1 MGP_CBAJ_G0030508.1 mouse_genomes_project 6 71167778 71168814 - MGP_CBAJ_P0077495 Vmn1r38 protein_coding protein_coding MGP_CBAJ_T0077390.1 MGP_CBAJ_G0030482.1 mouse_genomes_project 6 61848832 61857389 - MGP_CBAJ_P0077390 Vmn1r31 protein_coding protein_coding MGP_CBAJ_T0077391.1 MGP_CBAJ_G0030482.1 mouse_genomes_project 6 61857014 61860869 - MGP_CBAJ_P0077391 Vmn1r31 protein_coding protein_coding MGP_CBAJ_T0077392.1 MGP_CBAJ_G0030482.1 mouse_genomes_project 6 61857014 61860823 - MGP_CBAJ_P0077392 Vmn1r31 protein_coding protein_coding MGP_CBAJ_T0077393.1 MGP_CBAJ_G0030482.1 mouse_genomes_project 6 61857014 61860900 - MGP_CBAJ_P0077393 Vmn1r31 protein_coding protein_coding MGP_CBAJ_T0080260.1 MGP_CBAJ_G0031094.1 mouse_genomes_project 6 150653619 150657038 - MGP_CBAJ_P0080260 Mgp protein_coding protein_coding MGP_CBAJ_T0080261.1 MGP_CBAJ_G0031094.1 mouse_genomes_project 6 150654904 150656996 - Mgp protein_coding retained_intron MGP_CBAJ_T0008519.1 MGP_CBAJ_G0006877.1 mouse_genomes_project 6 71961055 72004336 + lincRNA lincRNA MGP_CBAJ_T0001915.1 MGP_CBAJ_G0001831.1 mouse_genomes_project 6 39908320 39909537 - TEC TEC MGP_CBAJ_T0080726.1 MGP_CBAJ_G0031174.1 mouse_genomes_project 6 164649797 164667052 + MGP_CBAJ_P0080726 2810474O19Rik protein_coding protein_coding MGP_CBAJ_T0080727.1 MGP_CBAJ_G0031174.1 mouse_genomes_project 6 164649811 164676087 + MGP_CBAJ_P0080727 2810474O19Rik protein_coding protein_coding MGP_CBAJ_T0080728.1 MGP_CBAJ_G0031174.1 mouse_genomes_project 6 164649839 164669358 + MGP_CBAJ_P0080728 2810474O19Rik protein_coding protein_coding MGP_CBAJ_T0080729.1 MGP_CBAJ_G0031174.1 mouse_genomes_project 6 164649857 164675305 + MGP_CBAJ_P0080729 2810474O19Rik protein_coding protein_coding MGP_CBAJ_T0080730.1 MGP_CBAJ_G0031174.1 mouse_genomes_project 6 164649857 164675305 + MGP_CBAJ_P0080730 2810474O19Rik protein_coding protein_coding MGP_CBAJ_T0080731.1 MGP_CBAJ_G0031174.1 mouse_genomes_project 6 164649956 164650839 + 2810474O19Rik protein_coding retained_intron MGP_CBAJ_T0080732.1 MGP_CBAJ_G0031174.1 mouse_genomes_project 6 164650111 164665870 + MGP_CBAJ_P0080732 2810474O19Rik protein_coding protein_coding MGP_CBAJ_T0080733.1 MGP_CBAJ_G0031174.1 mouse_genomes_project 6 164651799 164654750 + 2810474O19Rik protein_coding retained_intron MGP_CBAJ_T0080734.1 MGP_CBAJ_G0031174.1 mouse_genomes_project 6 164657717 164666348 + MGP_CBAJ_P0080734 2810474O19Rik protein_coding protein_coding MGP_CBAJ_T0080735.1 MGP_CBAJ_G0031174.1 mouse_genomes_project 6 164665036 164666154 + MGP_CBAJ_P0080735 2810474O19Rik protein_coding protein_coding MGP_CBAJ_T0080736.1 MGP_CBAJ_G0031174.1 mouse_genomes_project 6 164665838 164676082 + MGP_CBAJ_P0080736 2810474O19Rik protein_coding protein_coding MGP_CBAJ_T0079057.1 MGP_CBAJ_G0030813.1 mouse_genomes_project 6 125616728 125627015 - MGP_CBAJ_P0079057 Timp4 protein_coding protein_coding MGP_CBAJ_T0079058.1 MGP_CBAJ_G0030813.1 mouse_genomes_project 6 125621647 125626667 - MGP_CBAJ_P0079058 Timp4 protein_coding protein_coding MGP_CBAJ_T0000139.1 MGP_CBAJ_G0000106.1 mouse_genomes_project 6 72377011 72377309 + MGP_CBAJ_P0000139 Igkv9-129 IG_V_gene IG_V_gene MGP_CBAJ_T0000140.1 MGP_CBAJ_G0000106.1 mouse_genomes_project 6 72377014 72377309 + MGP_CBAJ_P0000140 Igkv9-129 IG_V_gene IG_V_gene MGP_CBAJ_T0076342.1 MGP_CBAJ_G0030211.1 mouse_genomes_project 6 30286068 30316538 - MGP_CBAJ_P0076342 Tmem209 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076343.1 MGP_CBAJ_G0030211.1 mouse_genomes_project 6 30287812 30316549 - MGP_CBAJ_P0076343 Tmem209 protein_coding protein_coding MGP_CBAJ_T0076344.1 MGP_CBAJ_G0030211.1 mouse_genomes_project 6 30288037 30316550 - MGP_CBAJ_P0076344 Tmem209 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076345.1 MGP_CBAJ_G0030211.1 mouse_genomes_project 6 30288243 30316617 - MGP_CBAJ_P0076345 Tmem209 protein_coding protein_coding MGP_CBAJ_T0076346.1 MGP_CBAJ_G0030211.1 mouse_genomes_project 6 30289430 30316552 - MGP_CBAJ_P0076346 Tmem209 protein_coding protein_coding MGP_CBAJ_T0076347.1 MGP_CBAJ_G0030211.1 mouse_genomes_project 6 30289816 30316549 - MGP_CBAJ_P0076347 Tmem209 protein_coding protein_coding MGP_CBAJ_T0076348.1 MGP_CBAJ_G0030211.1 mouse_genomes_project 6 30297371 30299195 - Tmem209 protein_coding retained_intron MGP_CBAJ_T0076349.1 MGP_CBAJ_G0030211.1 mouse_genomes_project 6 30309018 30316583 - MGP_CBAJ_P0076349 Tmem209 protein_coding protein_coding MGP_CBAJ_T0076350.1 MGP_CBAJ_G0030211.1 mouse_genomes_project 6 30311582 30316556 - Tmem209 protein_coding retained_intron MGP_CBAJ_T0076351.1 MGP_CBAJ_G0030211.1 mouse_genomes_project 6 30312585 30316558 - MGP_CBAJ_P0076351 Tmem209 protein_coding protein_coding MGP_CBAJ_T0001974.1 MGP_CBAJ_G0001890.1 mouse_genomes_project 6 78160804 78163855 - TEC TEC MGP_CBAJ_T0015226.1 MGP_CBAJ_G0013338.1 mouse_genomes_project 6 81227419 81228388 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002526.1 MGP_CBAJ_G0002430.1 mouse_genomes_project 6 42760096 42760142 + MGP_CBAJ_P0002526 Trbj1-7 TR_J_gene TR_J_gene MGP_CBAJ_T0002527.1 MGP_CBAJ_G0002430.1 mouse_genomes_project 6 42760096 42760141 + Trbj1-7 TR_J_gene processed_transcript MGP_CBAJ_T0015188.1 MGP_CBAJ_G0013300.1 mouse_genomes_project 6 71806358 71807282 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0080279.1 MGP_CBAJ_G0031099.1 mouse_genomes_project 6 151151603 151305195 + Ptpro protein_coding retained_intron MGP_CBAJ_T0080280.1 MGP_CBAJ_G0031099.1 mouse_genomes_project 6 151151618 151393417 + MGP_CBAJ_P0080280 Ptpro protein_coding protein_coding MGP_CBAJ_T0080281.1 MGP_CBAJ_G0031099.1 mouse_genomes_project 6 151151749 151393417 + MGP_CBAJ_P0080281 Ptpro protein_coding protein_coding MGP_CBAJ_T0080282.1 MGP_CBAJ_G0031099.1 mouse_genomes_project 6 151337429 151393423 + MGP_CBAJ_P0080282 Ptpro protein_coding protein_coding MGP_CBAJ_T0080283.1 MGP_CBAJ_G0031099.1 mouse_genomes_project 6 151337445 151393423 + MGP_CBAJ_P0080283 Ptpro protein_coding protein_coding MGP_CBAJ_T0080284.1 MGP_CBAJ_G0031099.1 mouse_genomes_project 6 151337467 151341038 + Ptpro protein_coding retained_intron MGP_CBAJ_T0080285.1 MGP_CBAJ_G0031099.1 mouse_genomes_project 6 151382878 151392494 + Ptpro protein_coding processed_transcript MGP_CBAJ_T0080286.1 MGP_CBAJ_G0031099.1 mouse_genomes_project 6 151384017 151392812 + Ptpro protein_coding processed_transcript MGP_CBAJ_T0076599.1 MGP_CBAJ_G0030259.1 mouse_genomes_project 6 39060697 39111981 + MGP_CBAJ_P0076599 Ttc26 protein_coding protein_coding MGP_CBAJ_T0076600.1 MGP_CBAJ_G0030259.1 mouse_genomes_project 6 39060753 39075607 + MGP_CBAJ_P0076600 Ttc26 protein_coding protein_coding MGP_CBAJ_T0076601.1 MGP_CBAJ_G0030259.1 mouse_genomes_project 6 39060753 39111981 + MGP_CBAJ_P0076601 Ttc26 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076602.1 MGP_CBAJ_G0030259.1 mouse_genomes_project 6 39060757 39078745 + MGP_CBAJ_P0076602 Ttc26 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076603.1 MGP_CBAJ_G0030259.1 mouse_genomes_project 6 39071985 39075945 + Ttc26 protein_coding retained_intron MGP_CBAJ_T0079356.1 MGP_CBAJ_G0030863.1 mouse_genomes_project 6 131229068 131270264 - B4galnt3 protein_coding processed_transcript MGP_CBAJ_T0079357.1 MGP_CBAJ_G0030863.1 mouse_genomes_project 6 131229089 131329998 - MGP_CBAJ_P0079357 B4galnt3 protein_coding protein_coding MGP_CBAJ_T0079358.1 MGP_CBAJ_G0030863.1 mouse_genomes_project 6 131229558 131329998 - MGP_CBAJ_P0079358 B4galnt3 protein_coding unknown_likely_coding MGP_CBAJ_T0077761.1 MGP_CBAJ_G0030564.1 mouse_genomes_project 6 84609903 84612206 - Reg3g protein_coding retained_intron MGP_CBAJ_T0077762.1 MGP_CBAJ_G0030564.1 mouse_genomes_project 6 84609903 84612507 - MGP_CBAJ_P0077762 Reg3g protein_coding protein_coding MGP_CBAJ_T0078928.1 MGP_CBAJ_G0030790.1 mouse_genomes_project 6 123662556 123668207 + MGP_CBAJ_P0078928 Jagn1 protein_coding protein_coding MGP_CBAJ_T0078929.1 MGP_CBAJ_G0030790.1 mouse_genomes_project 6 123662582 123664997 + Jagn1 protein_coding retained_intron MGP_CBAJ_T0078930.1 MGP_CBAJ_G0030790.1 mouse_genomes_project 6 123662597 123668187 + MGP_CBAJ_P0078930 Jagn1 protein_coding protein_coding MGP_CBAJ_T0015380.1 MGP_CBAJ_G0013492.1 mouse_genomes_project 6 140376200 140379801 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0080057.1 MGP_CBAJ_G0031019.1 mouse_genomes_project 6 142217301 142229281 - MGP_CBAJ_P0080057 Klrc1 protein_coding protein_coding MGP_CBAJ_T0080058.1 MGP_CBAJ_G0031019.1 mouse_genomes_project 6 142225132 142229236 - MGP_CBAJ_P0080058 Klrc1 protein_coding protein_coding MGP_CBAJ_T0080059.1 MGP_CBAJ_G0031019.1 mouse_genomes_project 6 142225133 142229281 - MGP_CBAJ_P0080059 Klrc1 protein_coding protein_coding MGP_CBAJ_T0080060.1 MGP_CBAJ_G0031019.1 mouse_genomes_project 6 142225157 142229218 - MGP_CBAJ_P0080060 Klrc1 protein_coding protein_coding MGP_CBAJ_T0076727.1 MGP_CBAJ_G0030286.1 mouse_genomes_project 6 41583707 41584649 - MGP_CBAJ_P0076727 Olfr461 protein_coding protein_coding MGP_CBAJ_T0015253.1 MGP_CBAJ_G0013365.1 mouse_genomes_project 6 92163032 92163972 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015005.1 MGP_CBAJ_G0013117.1 mouse_genomes_project 6 1059259 1059355 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0076613.1 MGP_CBAJ_G0030261.1 mouse_genomes_project 6 39237391 39243560 + Fmc1 protein_coding processed_transcript MGP_CBAJ_T0076614.1 MGP_CBAJ_G0030261.1 mouse_genomes_project 6 39238934 39243561 + MGP_CBAJ_P0076614 Fmc1 protein_coding protein_coding MGP_CBAJ_T0080358.1 MGP_CBAJ_G0031110.1 mouse_genomes_project 6 154237721 154295957 - MGP_CBAJ_P0080358 Plcz1 protein_coding protein_coding MGP_CBAJ_T0080359.1 MGP_CBAJ_G0031110.1 mouse_genomes_project 6 154237770 154295931 - MGP_CBAJ_P0080359 Plcz1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080360.1 MGP_CBAJ_G0031110.1 mouse_genomes_project 6 154237772 154295912 - MGP_CBAJ_P0080360 Plcz1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080361.1 MGP_CBAJ_G0031110.1 mouse_genomes_project 6 154275204 154295912 - MGP_CBAJ_P0080361 Plcz1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076683.1 MGP_CBAJ_G0030275.1 mouse_genomes_project 6 40481782 40492525 + MGP_CBAJ_P0076683 Ndufb2 protein_coding protein_coding MGP_CBAJ_T0076684.1 MGP_CBAJ_G0030275.1 mouse_genomes_project 6 40481791 40488615 + MGP_CBAJ_P0076684 Ndufb2 protein_coding protein_coding MGP_CBAJ_T0076685.1 MGP_CBAJ_G0030275.1 mouse_genomes_project 6 40481793 40488566 + Ndufb2 protein_coding processed_transcript MGP_CBAJ_T0076686.1 MGP_CBAJ_G0030275.1 mouse_genomes_project 6 40481796 40485867 + Ndufb2 protein_coding retained_intron MGP_CBAJ_T0076687.1 MGP_CBAJ_G0030275.1 mouse_genomes_project 6 40486383 40488436 + Ndufb2 protein_coding retained_intron MGP_CBAJ_T0076688.1 MGP_CBAJ_G0030275.1 mouse_genomes_project 6 40490926 40492453 + Ndufb2 protein_coding processed_transcript MGP_CBAJ_T0078088.1 MGP_CBAJ_G0030626.1 mouse_genomes_project 6 92922967 92924659 - MGP_CBAJ_P0078088 Nat8 protein_coding protein_coding MGP_CBAJ_T0011545.1 MGP_CBAJ_G0009683.1 mouse_genomes_project 6 156212064 156212375 - Gm23069 misc_RNA misc_RNA MGP_CBAJ_T0079862.1 MGP_CBAJ_G0030969.1 mouse_genomes_project 6 138860718 138881832 + MGP_CBAJ_P0079862 Akap3 protein_coding protein_coding MGP_CBAJ_T0079863.1 MGP_CBAJ_G0030969.1 mouse_genomes_project 6 138860764 138881829 + MGP_CBAJ_P0079863 Akap3 protein_coding protein_coding MGP_CBAJ_T0079864.1 MGP_CBAJ_G0030969.1 mouse_genomes_project 6 138860780 138881832 + MGP_CBAJ_P0079864 Akap3 protein_coding protein_coding MGP_CBAJ_T0008393.1 MGP_CBAJ_G0006791.1 mouse_genomes_project 6 3607291 3636684 - Gm20617 lincRNA lincRNA MGP_CBAJ_T0008394.1 MGP_CBAJ_G0006791.1 mouse_genomes_project 6 3607695 3636849 - Gm20617 lincRNA lincRNA MGP_CBAJ_T0101988.1 MGP_CBAJ_G0040019.1 mouse_genomes_project 6 60481202 60481560 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0004937.1 MGP_CBAJ_G0004217.1 mouse_genomes_project 6 95020460 95021645 - Gm44210 antisense antisense MGP_CBAJ_T0078634.1 MGP_CBAJ_G0030738.1 mouse_genomes_project 6 105296133 105344283 - MGP_CBAJ_P0078634 Eogt protein_coding protein_coding MGP_CBAJ_T0078635.1 MGP_CBAJ_G0030738.1 mouse_genomes_project 6 105298081 105343984 - Eogt protein_coding processed_transcript MGP_CBAJ_T0078636.1 MGP_CBAJ_G0030738.1 mouse_genomes_project 6 105298110 105344028 - MGP_CBAJ_P0078636 Eogt protein_coding protein_coding MGP_CBAJ_T0078637.1 MGP_CBAJ_G0030738.1 mouse_genomes_project 6 105298295 105307148 - Eogt protein_coding processed_transcript MGP_CBAJ_T0078638.1 MGP_CBAJ_G0030738.1 mouse_genomes_project 6 105323639 105342885 - MGP_CBAJ_P0078638 Eogt protein_coding protein_coding MGP_CBAJ_T0078639.1 MGP_CBAJ_G0030738.1 mouse_genomes_project 6 105339080 105342895 - MGP_CBAJ_P0078639 Eogt protein_coding protein_coding MGP_CBAJ_T0078640.1 MGP_CBAJ_G0030738.1 mouse_genomes_project 6 105340370 105343961 - MGP_CBAJ_P0078640 Eogt protein_coding protein_coding MGP_CBAJ_T0078641.1 MGP_CBAJ_G0030738.1 mouse_genomes_project 6 105340424 105344025 - MGP_CBAJ_P0078641 Eogt protein_coding protein_coding MGP_CBAJ_T0002457.1 MGP_CBAJ_G0002366.1 mouse_genomes_project 6 42757655 42757667 + MGP_CBAJ_P0002457 Trbd1 TR_D_gene TR_D_gene MGP_CBAJ_T0077706.1 MGP_CBAJ_G0030549.1 mouse_genomes_project 6 78156275 78166783 + MGP_CBAJ_P0077706 Retsat protein_coding protein_coding MGP_CBAJ_T0077707.1 MGP_CBAJ_G0030549.1 mouse_genomes_project 6 78156428 78165734 + MGP_CBAJ_P0077707 Retsat protein_coding protein_coding MGP_CBAJ_T0077708.1 MGP_CBAJ_G0030549.1 mouse_genomes_project 6 78156428 78165734 + MGP_CBAJ_P0077708 Retsat protein_coding protein_coding MGP_CBAJ_T0077709.1 MGP_CBAJ_G0030549.1 mouse_genomes_project 6 78162176 78164742 + Retsat protein_coding processed_transcript MGP_CBAJ_T0077710.1 MGP_CBAJ_G0030549.1 mouse_genomes_project 6 78164324 78165795 + MGP_CBAJ_P0077710 Retsat protein_coding protein_coding MGP_CBAJ_T0077711.1 MGP_CBAJ_G0030549.1 mouse_genomes_project 6 78164997 78165564 + MGP_CBAJ_P0077711 Retsat protein_coding protein_coding MGP_CBAJ_T0077917.1 MGP_CBAJ_G0030595.1 mouse_genomes_project 6 90057031 90065452 + Mob1a protein_coding processed_transcript MGP_CBAJ_T0077918.1 MGP_CBAJ_G0030595.1 mouse_genomes_project 6 90057049 90063472 + MGP_CBAJ_P0077918 Mob1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0077919.1 MGP_CBAJ_G0030595.1 mouse_genomes_project 6 90057093 90074784 + MGP_CBAJ_P0077919 Mob1a protein_coding protein_coding MGP_CBAJ_T0077920.1 MGP_CBAJ_G0030595.1 mouse_genomes_project 6 90057267 90074709 + MGP_CBAJ_P0077920 Mob1a protein_coding protein_coding MGP_CBAJ_T0076764.1 MGP_CBAJ_G0030306.1 mouse_genomes_project 6 42923637 42942517 - MGP_CBAJ_P0076764 Kel protein_coding protein_coding MGP_CBAJ_T0076765.1 MGP_CBAJ_G0030306.1 mouse_genomes_project 6 42923642 42925233 - MGP_CBAJ_P0076765 Kel protein_coding protein_coding MGP_CBAJ_T0076766.1 MGP_CBAJ_G0030306.1 mouse_genomes_project 6 42923661 42925092 - Kel protein_coding processed_transcript MGP_CBAJ_T0076767.1 MGP_CBAJ_G0030306.1 mouse_genomes_project 6 42925259 42937346 - MGP_CBAJ_P0076767 Kel protein_coding protein_coding MGP_CBAJ_T0076768.1 MGP_CBAJ_G0030306.1 mouse_genomes_project 6 42925674 42926200 - Kel protein_coding retained_intron MGP_CBAJ_T0018043.1 MGP_CBAJ_G0015385.1 mouse_genomes_project 6 118226658 118229132 + Gm17055 processed_transcript lincRNA MGP_CBAJ_T0018044.1 MGP_CBAJ_G0015385.1 mouse_genomes_project 6 118226786 118229252 + Gm17055 processed_transcript retained_intron MGP_CBAJ_T0015350.1 MGP_CBAJ_G0013462.1 mouse_genomes_project 6 132929731 132930138 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002000.1 MGP_CBAJ_G0001916.1 mouse_genomes_project 6 88478353 88479897 - TEC TEC MGP_CBAJ_T0078232.1 MGP_CBAJ_G0030650.1 mouse_genomes_project 6 94388435 94396630 + MGP_CBAJ_P0078232 D6Ertd527e protein_coding protein_coding MGP_CBAJ_T0078233.1 MGP_CBAJ_G0030650.1 mouse_genomes_project 6 94388437 94396686 + MGP_CBAJ_P0078233 D6Ertd527e protein_coding protein_coding MGP_CBAJ_T0078234.1 MGP_CBAJ_G0030650.1 mouse_genomes_project 6 94388437 94396687 + MGP_CBAJ_P0078234 D6Ertd527e protein_coding protein_coding MGP_CBAJ_T0078235.1 MGP_CBAJ_G0030650.1 mouse_genomes_project 6 94388471 94395097 + D6Ertd527e protein_coding processed_transcript MGP_CBAJ_T0078236.1 MGP_CBAJ_G0030650.1 mouse_genomes_project 6 94388502 94395089 + D6Ertd527e protein_coding processed_transcript MGP_CBAJ_T0080555.1 MGP_CBAJ_G0031147.1 mouse_genomes_project 6 160821892 160829211 - MGP_CBAJ_P0080555 Bhlhe41 protein_coding protein_coding MGP_CBAJ_T0080556.1 MGP_CBAJ_G0031147.1 mouse_genomes_project 6 160827155 160828955 - MGP_CBAJ_P0080556 Bhlhe41 protein_coding protein_coding MGP_CBAJ_T0080557.1 MGP_CBAJ_G0031147.1 mouse_genomes_project 6 160828315 160829005 - Bhlhe41 protein_coding retained_intron MGP_CBAJ_T0077461.1 MGP_CBAJ_G0030495.1 mouse_genomes_project 6 69257783 69261673 - Hpgds protein_coding retained_intron MGP_CBAJ_T0077462.1 MGP_CBAJ_G0030495.1 mouse_genomes_project 6 69258670 69284676 - MGP_CBAJ_P0077462 Hpgds protein_coding unknown_likely_coding MGP_CBAJ_T0077463.1 MGP_CBAJ_G0030495.1 mouse_genomes_project 6 69272140 69278432 - Hpgds protein_coding retained_intron MGP_CBAJ_T0075906.1 MGP_CBAJ_G0030130.1 mouse_genomes_project 6 9889945 10388680 - MGP_CBAJ_P0075906 Thsd7a protein_coding protein_coding MGP_CBAJ_T0075907.1 MGP_CBAJ_G0030130.1 mouse_genomes_project 6 9895422 10388837 - MGP_CBAJ_P0075907 Thsd7a protein_coding protein_coding MGP_CBAJ_T0075908.1 MGP_CBAJ_G0030130.1 mouse_genomes_project 6 9895462 9896665 - Thsd7a protein_coding retained_intron MGP_CBAJ_T0075909.1 MGP_CBAJ_G0030130.1 mouse_genomes_project 6 9895684 10014877 - Thsd7a protein_coding processed_transcript MGP_CBAJ_T0075910.1 MGP_CBAJ_G0030130.1 mouse_genomes_project 6 9899482 9903374 - Thsd7a protein_coding retained_intron MGP_CBAJ_T0075911.1 MGP_CBAJ_G0030130.1 mouse_genomes_project 6 10060855 10153437 - Thsd7a protein_coding processed_transcript MGP_CBAJ_T0076087.1 MGP_CBAJ_G0030160.1 mouse_genomes_project 6 21962522 22025848 - MGP_CBAJ_P0076087 Aass protein_coding protein_coding MGP_CBAJ_T0076088.1 MGP_CBAJ_G0030160.1 mouse_genomes_project 6 21986904 22020769 - Aass protein_coding processed_transcript MGP_CBAJ_T0076089.1 MGP_CBAJ_G0030160.1 mouse_genomes_project 6 21986904 22020801 - MGP_CBAJ_P0076089 Aass protein_coding protein_coding MGP_CBAJ_T0076090.1 MGP_CBAJ_G0030160.1 mouse_genomes_project 6 22003962 22025777 - Aass protein_coding processed_transcript MGP_CBAJ_T0002671.1 MGP_CBAJ_G0002551.1 mouse_genomes_project 6 42342121 42342588 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0097826.1 MGP_CBAJ_G0036099.1 mouse_genomes_project 6 49360885 49361430 - pseudogene pseudogene MGP_CBAJ_T0076749.1 MGP_CBAJ_G0030297.1 mouse_genomes_project 6 42451598 42461020 - MGP_CBAJ_P0076749 protein_coding protein_coding MGP_CBAJ_T0077183.1 MGP_CBAJ_G0030419.1 mouse_genomes_project 6 54915489 54920370 + MGP_CBAJ_P0077183 Evx1 protein_coding protein_coding MGP_CBAJ_T0077184.1 MGP_CBAJ_G0030419.1 mouse_genomes_project 6 54915543 54918636 + MGP_CBAJ_P0077184 Evx1 protein_coding protein_coding MGP_CBAJ_T0004963.1 MGP_CBAJ_G0004234.1 mouse_genomes_project 6 109776514 109925008 + Gm43948 antisense antisense MGP_CBAJ_T0100654.1 MGP_CBAJ_G0038909.1 mouse_genomes_project 6 24314829 24314952 - Gm22529 snoRNA snoRNA MGP_CBAJ_T0080584.1 MGP_CBAJ_G0031151.1 mouse_genomes_project 6 161582758 161605655 + MGP_CBAJ_P0080584 Fgfr1op2 protein_coding protein_coding MGP_CBAJ_T0080585.1 MGP_CBAJ_G0031151.1 mouse_genomes_project 6 161583456 161610950 + MGP_CBAJ_P0080585 Fgfr1op2 protein_coding unknown_likely_coding MGP_CBAJ_T0080586.1 MGP_CBAJ_G0031151.1 mouse_genomes_project 6 161583480 161605655 + MGP_CBAJ_P0080586 Fgfr1op2 protein_coding protein_coding MGP_CBAJ_T0080587.1 MGP_CBAJ_G0031151.1 mouse_genomes_project 6 161583499 161602767 + Fgfr1op2 protein_coding processed_transcript MGP_CBAJ_T0080588.1 MGP_CBAJ_G0031151.1 mouse_genomes_project 6 161583501 161600059 + Fgfr1op2 protein_coding retained_intron MGP_CBAJ_T0080589.1 MGP_CBAJ_G0031151.1 mouse_genomes_project 6 161601070 161610074 + Fgfr1op2 protein_coding processed_transcript MGP_CBAJ_T0004849.1 MGP_CBAJ_G0004159.1 mouse_genomes_project 6 34944268 34952461 - Gm14547 antisense antisense MGP_CBAJ_T0005001.1 MGP_CBAJ_G0004264.1 mouse_genomes_project 6 137300264 137303621 + Gm28809 antisense antisense MGP_CBAJ_T0005002.1 MGP_CBAJ_G0004264.1 mouse_genomes_project 6 137300845 137302510 + Gm28809 antisense antisense MGP_CBAJ_T0078091.1 MGP_CBAJ_G0030628.1 mouse_genomes_project 6 92976471 92984723 - MGP_CBAJ_P0078091 Nat8f2 protein_coding protein_coding MGP_CBAJ_T0078711.1 MGP_CBAJ_G0030750.1 mouse_genomes_project 6 108234569 108251520 - MGP_CBAJ_P0078711 Prok2 protein_coding protein_coding MGP_CBAJ_T0078712.1 MGP_CBAJ_G0030750.1 mouse_genomes_project 6 108234620 108251481 - MGP_CBAJ_P0078712 Prok2 protein_coding protein_coding MGP_CBAJ_T0078713.1 MGP_CBAJ_G0030750.1 mouse_genomes_project 6 108235290 108251511 - MGP_CBAJ_P0078713 Prok2 protein_coding protein_coding MGP_CBAJ_T0078714.1 MGP_CBAJ_G0030750.1 mouse_genomes_project 6 108247239 108251520 - MGP_CBAJ_P0078714 Prok2 protein_coding protein_coding MGP_CBAJ_T0004935.1 MGP_CBAJ_G0004215.1 mouse_genomes_project 6 94556141 94558147 + Gm44418 antisense antisense MGP_CBAJ_T0098076.1 MGP_CBAJ_G0036349.1 mouse_genomes_project 6 102806219 102806362 - Gm24601 rRNA rRNA MGP_CBAJ_T0005033.1 MGP_CBAJ_G0004290.1 mouse_genomes_project 6 157222939 157234793 + 5330439B14Rik antisense antisense MGP_CBAJ_T0011541.1 MGP_CBAJ_G0009679.1 mouse_genomes_project 6 133692688 133692937 - Gm27826 misc_RNA misc_RNA MGP_CBAJ_T0079779.1 MGP_CBAJ_G0030950.1 mouse_genomes_project 6 136933330 136937658 - protein_coding retained_intron MGP_CBAJ_T0079780.1 MGP_CBAJ_G0030950.1 mouse_genomes_project 6 136935984 136938258 - MGP_CBAJ_P0079780 protein_coding protein_coding MGP_CBAJ_T0079781.1 MGP_CBAJ_G0030950.1 mouse_genomes_project 6 136936000 136938258 - protein_coding processed_transcript MGP_CBAJ_T0079782.1 MGP_CBAJ_G0030950.1 mouse_genomes_project 6 136937251 136938260 - protein_coding retained_intron MGP_CBAJ_T0015429.1 MGP_CBAJ_G0013541.1 mouse_genomes_project 6 154408602 154409044 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0078755.1 MGP_CBAJ_G0030760.1 mouse_genomes_project 6 116120208 116160641 - MGP_CBAJ_P0078755 Il5ra protein_coding protein_coding MGP_CBAJ_T0078756.1 MGP_CBAJ_G0030760.1 mouse_genomes_project 6 116120456 116160552 - MGP_CBAJ_P0078756 Il5ra protein_coding protein_coding MGP_CBAJ_T0078757.1 MGP_CBAJ_G0030760.1 mouse_genomes_project 6 116121824 116156707 - MGP_CBAJ_P0078757 Il5ra protein_coding protein_coding MGP_CBAJ_T0077425.1 MGP_CBAJ_G0030490.1 mouse_genomes_project 6 64596580 64621896 + Mmrn1 protein_coding retained_intron MGP_CBAJ_T0077426.1 MGP_CBAJ_G0030490.1 mouse_genomes_project 6 64620253 64665582 + MGP_CBAJ_P0077426 Mmrn1 protein_coding protein_coding MGP_CBAJ_T0077427.1 MGP_CBAJ_G0030490.1 mouse_genomes_project 6 64620255 64665582 + MGP_CBAJ_P0077427 Mmrn1 protein_coding protein_coding MGP_CBAJ_T0078035.1 MGP_CBAJ_G0030614.1 mouse_genomes_project 6 92130544 92139627 - MGP_CBAJ_P0078035 Spr protein_coding nonsense_mediated_decay MGP_CBAJ_T0078036.1 MGP_CBAJ_G0030614.1 mouse_genomes_project 6 92133476 92139627 - MGP_CBAJ_P0078036 Spr protein_coding protein_coding MGP_CBAJ_T0078037.1 MGP_CBAJ_G0030614.1 mouse_genomes_project 6 92133485 92139617 - MGP_CBAJ_P0078037 Spr protein_coding protein_coding MGP_CBAJ_T0078038.1 MGP_CBAJ_G0030614.1 mouse_genomes_project 6 92133798 92139623 - MGP_CBAJ_P0078038 Spr protein_coding protein_coding MGP_CBAJ_T0101989.1 MGP_CBAJ_G0040020.1 mouse_genomes_project 6 60509517 60510406 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0078673.1 MGP_CBAJ_G0030745.1 mouse_genomes_project 6 106535695 106659948 - MGP_CBAJ_P0078673 Gm765 protein_coding protein_coding MGP_CBAJ_T0078674.1 MGP_CBAJ_G0030745.1 mouse_genomes_project 6 106658655 106659853 - Gm765 protein_coding retained_intron MGP_CBAJ_T0004939.1 MGP_CBAJ_G0004219.1 mouse_genomes_project 6 95292217 95295515 + Gm5577 antisense antisense MGP_CBAJ_T0004940.1 MGP_CBAJ_G0004219.1 mouse_genomes_project 6 95293017 95295507 + Gm5577 antisense antisense MGP_CBAJ_T0004941.1 MGP_CBAJ_G0004219.1 mouse_genomes_project 6 95293017 95323331 + Gm5577 antisense antisense MGP_CBAJ_T0001883.1 MGP_CBAJ_G0001799.1 mouse_genomes_project 6 5026672 5028544 + TEC TEC MGP_CBAJ_T0015325.1 MGP_CBAJ_G0013437.1 mouse_genomes_project 6 124371153 124371205 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011507.1 MGP_CBAJ_G0009645.1 mouse_genomes_project 6 30573534 30573764 + Gm27522 misc_RNA misc_RNA MGP_CBAJ_T0079907.1 MGP_CBAJ_G0030978.1 mouse_genomes_project 6 139667419 139756729 + MGP_CBAJ_P0079907 Cracr2a protein_coding protein_coding MGP_CBAJ_T0079908.1 MGP_CBAJ_G0030978.1 mouse_genomes_project 6 139686777 139756634 + MGP_CBAJ_P0079908 Cracr2a protein_coding protein_coding MGP_CBAJ_T0008665.1 MGP_CBAJ_G0006989.1 mouse_genomes_project 6 158238873 158240417 - 4930579D09Rik lincRNA lincRNA MGP_CBAJ_T0001988.1 MGP_CBAJ_G0001904.1 mouse_genomes_project 6 83682318 83683805 - TEC TEC MGP_CBAJ_T0001871.1 MGP_CBAJ_G0001787.1 mouse_genomes_project 6 1315822 1317614 + TEC TEC MGP_CBAJ_T0015443.1 MGP_CBAJ_G0013555.1 mouse_genomes_project 6 163949889 163950497 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0076827.1 MGP_CBAJ_G0030324.1 mouse_genomes_project 6 43680906 43681836 + MGP_CBAJ_P0076827 Tas2r126 protein_coding protein_coding MGP_CBAJ_T0002064.1 MGP_CBAJ_G0001980.1 mouse_genomes_project 6 109330404 109331929 - TEC TEC MGP_CBAJ_T0078622.1 MGP_CBAJ_G0030734.1 mouse_genomes_project 6 103501906 103767684 - MGP_CBAJ_P0078622 Suclg2 protein_coding protein_coding MGP_CBAJ_T0078623.1 MGP_CBAJ_G0030734.1 mouse_genomes_project 6 103506316 103767659 - MGP_CBAJ_P0078623 Suclg2 protein_coding unknown_likely_coding MGP_CBAJ_T0078624.1 MGP_CBAJ_G0030734.1 mouse_genomes_project 6 103604625 103682256 - Suclg2 protein_coding processed_transcript MGP_CBAJ_T0078625.1 MGP_CBAJ_G0030734.1 mouse_genomes_project 6 103632838 103698326 - MGP_CBAJ_P0078625 Suclg2 protein_coding protein_coding MGP_CBAJ_T0078626.1 MGP_CBAJ_G0030734.1 mouse_genomes_project 6 103692979 103767684 - Suclg2 protein_coding retained_intron MGP_CBAJ_T0076001.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 15918524 16066400 + St7 protein_coding retained_intron MGP_CBAJ_T0076002.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 15919537 16203050 + MGP_CBAJ_P0076002 St7 protein_coding protein_coding MGP_CBAJ_T0076003.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 15919584 16203050 + MGP_CBAJ_P0076003 St7 protein_coding protein_coding MGP_CBAJ_T0076004.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 15919622 16203053 + MGP_CBAJ_P0076004 St7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076005.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 15919622 16202994 + MGP_CBAJ_P0076005 St7 protein_coding protein_coding MGP_CBAJ_T0076006.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 15919622 16101563 + MGP_CBAJ_P0076006 St7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076007.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 15919622 16202994 + MGP_CBAJ_P0076007 St7 protein_coding protein_coding MGP_CBAJ_T0076008.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 15919622 16202994 + MGP_CBAJ_P0076008 St7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076009.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 15919757 16202994 + MGP_CBAJ_P0076009 St7 protein_coding protein_coding MGP_CBAJ_T0076010.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 15976245 16202994 + MGP_CBAJ_P0076010 St7 protein_coding protein_coding MGP_CBAJ_T0076011.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 15976245 16202994 + MGP_CBAJ_P0076011 St7 protein_coding protein_coding MGP_CBAJ_T0076012.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 15982617 16164651 + St7 protein_coding processed_transcript MGP_CBAJ_T0076013.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 15982617 16203053 + MGP_CBAJ_P0076013 St7 protein_coding protein_coding MGP_CBAJ_T0076014.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 15982663 16203048 + MGP_CBAJ_P0076014 St7 protein_coding protein_coding MGP_CBAJ_T0076015.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 15982739 16083361 + St7 protein_coding retained_intron MGP_CBAJ_T0076016.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 15982776 16203050 + St7 protein_coding retained_intron MGP_CBAJ_T0076017.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 15982839 16203029 + St7 protein_coding retained_intron MGP_CBAJ_T0076018.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 16087178 16095105 + St7 protein_coding processed_transcript MGP_CBAJ_T0076019.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 16087197 16163066 + St7 protein_coding processed_transcript MGP_CBAJ_T0076020.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 16101518 16164637 + St7 protein_coding processed_transcript MGP_CBAJ_T0076021.1 MGP_CBAJ_G0030146.1 mouse_genomes_project 6 16163727 16202963 + St7 protein_coding processed_transcript MGP_CBAJ_T0001953.1 MGP_CBAJ_G0001869.1 mouse_genomes_project 6 57549739 57550151 + TEC TEC MGP_CBAJ_T0076153.1 MGP_CBAJ_G0030180.1 mouse_genomes_project 6 27715808 27738841 - MGP_CBAJ_P0076153 Zfp800 protein_coding protein_coding MGP_CBAJ_T0076154.1 MGP_CBAJ_G0030180.1 mouse_genomes_project 6 27716121 27886067 - MGP_CBAJ_P0076154 Zfp800 protein_coding protein_coding MGP_CBAJ_T0076155.1 MGP_CBAJ_G0030180.1 mouse_genomes_project 6 27717330 27738853 - MGP_CBAJ_P0076155 Zfp800 protein_coding protein_coding MGP_CBAJ_T0076156.1 MGP_CBAJ_G0030180.1 mouse_genomes_project 6 27719371 27738844 - MGP_CBAJ_P0076156 Zfp800 protein_coding protein_coding MGP_CBAJ_T0076157.1 MGP_CBAJ_G0030180.1 mouse_genomes_project 6 27720298 27738862 - MGP_CBAJ_P0076157 Zfp800 protein_coding protein_coding MGP_CBAJ_T0077351.1 MGP_CBAJ_G0030458.1 mouse_genomes_project 6 60295654 60298188 + MGP_CBAJ_P0077351 Vmn1r11 protein_coding protein_coding MGP_CBAJ_T0008396.1 MGP_CBAJ_G0006793.1 mouse_genomes_project 6 3760822 3843893 - Gm20618 lincRNA lincRNA MGP_CBAJ_T0008397.1 MGP_CBAJ_G0006793.1 mouse_genomes_project 6 3790518 3850380 - Gm20618 lincRNA lincRNA MGP_CBAJ_T0079910.1 MGP_CBAJ_G0030980.1 mouse_genomes_project 6 140043966 140122042 + MGP_CBAJ_P0079910 Tspan11 protein_coding protein_coding MGP_CBAJ_T0079911.1 MGP_CBAJ_G0030980.1 mouse_genomes_project 6 140044152 140086382 + Tspan11 protein_coding retained_intron MGP_CBAJ_T0015365.1 MGP_CBAJ_G0013477.1 mouse_genomes_project 6 136689719 136690959 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008652.1 MGP_CBAJ_G0006981.1 mouse_genomes_project 6 153527227 153534216 - 4922502N22Rik lincRNA lincRNA MGP_CBAJ_T0077668.1 MGP_CBAJ_G0030543.1 mouse_genomes_project 6 77900855 77906093 - MGP_CBAJ_P0077668 Vamp8 protein_coding protein_coding MGP_CBAJ_T0077669.1 MGP_CBAJ_G0030543.1 mouse_genomes_project 6 77900860 77905301 - MGP_CBAJ_P0077669 Vamp8 protein_coding protein_coding MGP_CBAJ_T0078237.1 MGP_CBAJ_G0030651.1 mouse_genomes_project 6 94417607 94586702 - MGP_CBAJ_P0078237 Antxr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078238.1 MGP_CBAJ_G0030651.1 mouse_genomes_project 6 94420758 94613328 - MGP_CBAJ_P0078238 Antxr1 protein_coding protein_coding MGP_CBAJ_T0078239.1 MGP_CBAJ_G0030651.1 mouse_genomes_project 6 94441679 94613577 - MGP_CBAJ_P0078239 Antxr1 protein_coding protein_coding MGP_CBAJ_T0078240.1 MGP_CBAJ_G0030651.1 mouse_genomes_project 6 94462477 94613617 - MGP_CBAJ_P0078240 Antxr1 protein_coding protein_coding MGP_CBAJ_T0078241.1 MGP_CBAJ_G0030651.1 mouse_genomes_project 6 94481981 94548642 - Antxr1 protein_coding processed_transcript MGP_CBAJ_T0078242.1 MGP_CBAJ_G0030651.1 mouse_genomes_project 6 94558919 94613674 - Antxr1 protein_coding retained_intron MGP_CBAJ_T0002047.1 MGP_CBAJ_G0001963.1 mouse_genomes_project 6 99304453 99306289 + TEC TEC MGP_CBAJ_T0015288.1 MGP_CBAJ_G0013400.1 mouse_genomes_project 6 108829986 108894318 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015085.1 MGP_CBAJ_G0013197.1 mouse_genomes_project 6 41556783 41557195 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002153.1 MGP_CBAJ_G0002068.1 mouse_genomes_project 6 164619288 164623757 - TEC TEC MGP_CBAJ_T0015062.1 MGP_CBAJ_G0013174.1 mouse_genomes_project 6 25165485 25165820 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002113.1 MGP_CBAJ_G0002028.1 mouse_genomes_project 6 141526977 141527174 - TEC TEC MGP_CBAJ_T0015248.1 MGP_CBAJ_G0013360.1 mouse_genomes_project 6 92054083 92054599 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008545.1 MGP_CBAJ_G0006898.1 mouse_genomes_project 6 91120036 91194791 + Gm44127 lincRNA lincRNA MGP_CBAJ_T0015284.1 MGP_CBAJ_G0013396.1 mouse_genomes_project 6 107149410 107149690 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100689.1 MGP_CBAJ_G0038944.1 mouse_genomes_project 6 101736443 101736579 + Gm22840 snoRNA snoRNA MGP_CBAJ_T0101996.1 MGP_CBAJ_G0040027.1 mouse_genomes_project 6 61519954 61523635 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015089.1 MGP_CBAJ_G0013201.1 mouse_genomes_project 6 42447466 42448029 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100684.1 MGP_CBAJ_G0038939.1 mouse_genomes_project 6 90643953 90644083 - Gm23014 snoRNA snoRNA MGP_CBAJ_T0015099.1 MGP_CBAJ_G0013211.1 mouse_genomes_project 6 46159644 46159789 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0080016.1 MGP_CBAJ_G0031007.1 mouse_genomes_project 6 141909354 141922471 - MGP_CBAJ_P0080016 Clec12b protein_coding protein_coding MGP_CBAJ_T0080017.1 MGP_CBAJ_G0031007.1 mouse_genomes_project 6 141909626 141922842 - MGP_CBAJ_P0080017 Clec12b protein_coding protein_coding MGP_CBAJ_T0015105.1 MGP_CBAJ_G0013217.1 mouse_genomes_project 6 49728251 49728630 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002009.1 MGP_CBAJ_G0001925.1 mouse_genomes_project 6 93197549 93199351 + TEC TEC MGP_CBAJ_T0004865.1 MGP_CBAJ_G0004173.1 mouse_genomes_project 6 50704387 50712807 - Gm44119 antisense antisense MGP_CBAJ_T0076208.1 MGP_CBAJ_G0030191.1 mouse_genomes_project 6 28864896 28867595 + MGP_CBAJ_P0076208 Hilpda protein_coding protein_coding MGP_CBAJ_T0076209.1 MGP_CBAJ_G0030191.1 mouse_genomes_project 6 28865034 28867855 + MGP_CBAJ_P0076209 Hilpda protein_coding protein_coding MGP_CBAJ_T0005023.1 MGP_CBAJ_G0004282.1 mouse_genomes_project 6 148656749 148663329 + Gm19434 antisense antisense MGP_CBAJ_T0078997.1 MGP_CBAJ_G0030804.1 mouse_genomes_project 6 124010695 124348594 - MGP_CBAJ_P0078997 Atp2b2 protein_coding protein_coding MGP_CBAJ_T0078998.1 MGP_CBAJ_G0030804.1 mouse_genomes_project 6 124012533 124164935 - MGP_CBAJ_P0078998 Atp2b2 protein_coding protein_coding MGP_CBAJ_T0078999.1 MGP_CBAJ_G0030804.1 mouse_genomes_project 6 124013930 124164935 - MGP_CBAJ_P0078999 Atp2b2 protein_coding protein_coding MGP_CBAJ_T0079000.1 MGP_CBAJ_G0030804.1 mouse_genomes_project 6 124015153 124207144 - MGP_CBAJ_P0079000 Atp2b2 protein_coding protein_coding MGP_CBAJ_T0079001.1 MGP_CBAJ_G0030804.1 mouse_genomes_project 6 124018544 124115882 - MGP_CBAJ_P0079001 Atp2b2 protein_coding unknown_likely_coding MGP_CBAJ_T0079002.1 MGP_CBAJ_G0030804.1 mouse_genomes_project 6 124076900 124164766 - Atp2b2 protein_coding retained_intron MGP_CBAJ_T0079003.1 MGP_CBAJ_G0030804.1 mouse_genomes_project 6 124115882 124183929 - Atp2b2 protein_coding processed_transcript MGP_CBAJ_T0079004.1 MGP_CBAJ_G0030804.1 mouse_genomes_project 6 124116100 124349058 - Atp2b2 protein_coding processed_transcript MGP_CBAJ_T0077852.1 MGP_CBAJ_G0030582.1 mouse_genomes_project 6 89783305 89785116 + MGP_CBAJ_P0077852 Lbx2 protein_coding protein_coding MGP_CBAJ_T0077853.1 MGP_CBAJ_G0030582.1 mouse_genomes_project 6 89784210 89784969 + Lbx2 protein_coding processed_transcript MGP_CBAJ_T0004838.1 MGP_CBAJ_G0004150.1 mouse_genomes_project 6 30507001 30515318 + Gm13782 antisense antisense MGP_CBAJ_T0100672.1 MGP_CBAJ_G0038927.1 mouse_genomes_project 6 63174382 63174511 - Gm22622 snoRNA snoRNA MGP_CBAJ_T0008439.1 MGP_CBAJ_G0006822.1 mouse_genomes_project 6 31283801 31295235 + Gm13844 lincRNA lincRNA MGP_CBAJ_T0080202.1 MGP_CBAJ_G0031079.1 mouse_genomes_project 6 148666317 148711041 + MGP_CBAJ_P0080202 Fam234b protein_coding protein_coding MGP_CBAJ_T0080203.1 MGP_CBAJ_G0031079.1 mouse_genomes_project 6 148666317 148719746 + MGP_CBAJ_P0080203 Fam234b protein_coding protein_coding MGP_CBAJ_T0080204.1 MGP_CBAJ_G0031079.1 mouse_genomes_project 6 148666449 148680027 + MGP_CBAJ_P0080204 Fam234b protein_coding protein_coding MGP_CBAJ_T0080205.1 MGP_CBAJ_G0031079.1 mouse_genomes_project 6 148666752 148680056 + MGP_CBAJ_P0080205 Fam234b protein_coding protein_coding MGP_CBAJ_T0080206.1 MGP_CBAJ_G0031079.1 mouse_genomes_project 6 148706385 148711037 + Fam234b protein_coding retained_intron MGP_CBAJ_T0080683.1 MGP_CBAJ_G0031169.1 mouse_genomes_project 6 164111685 164112848 - Caprin2 protein_coding retained_intron MGP_CBAJ_T0080684.1 MGP_CBAJ_G0031169.1 mouse_genomes_project 6 164111685 164170895 - MGP_CBAJ_P0080684 Caprin2 protein_coding protein_coding MGP_CBAJ_T0080685.1 MGP_CBAJ_G0031169.1 mouse_genomes_project 6 164111686 164120547 - MGP_CBAJ_P0080685 Caprin2 protein_coding protein_coding MGP_CBAJ_T0080686.1 MGP_CBAJ_G0031169.1 mouse_genomes_project 6 164111686 164170808 - MGP_CBAJ_P0080686 Caprin2 protein_coding protein_coding MGP_CBAJ_T0080687.1 MGP_CBAJ_G0031169.1 mouse_genomes_project 6 164113232 164118335 - Caprin2 protein_coding retained_intron MGP_CBAJ_T0080688.1 MGP_CBAJ_G0031169.1 mouse_genomes_project 6 164113760 164120518 - Caprin2 protein_coding processed_transcript MGP_CBAJ_T0080689.1 MGP_CBAJ_G0031169.1 mouse_genomes_project 6 164116760 164133462 - Caprin2 protein_coding processed_transcript MGP_CBAJ_T0080690.1 MGP_CBAJ_G0031169.1 mouse_genomes_project 6 164152565 164170117 - MGP_CBAJ_P0080690 Caprin2 protein_coding protein_coding MGP_CBAJ_T0080691.1 MGP_CBAJ_G0031169.1 mouse_genomes_project 6 164159187 164165468 - Caprin2 protein_coding retained_intron MGP_CBAJ_T0080692.1 MGP_CBAJ_G0031169.1 mouse_genomes_project 6 164162321 164170820 - Caprin2 protein_coding processed_transcript MGP_CBAJ_T0080693.1 MGP_CBAJ_G0031169.1 mouse_genomes_project 6 164168827 164170267 - Caprin2 protein_coding processed_transcript MGP_CBAJ_T0076682.1 MGP_CBAJ_G0030274.1 mouse_genomes_project 6 40474938 40485715 + MGP_CBAJ_P0076682 protein_coding nonsense_mediated_decay MGP_CBAJ_T0002091.1 MGP_CBAJ_G0002007.1 mouse_genomes_project 6 127202090 127204808 + TEC TEC MGP_CBAJ_T0099453.1 MGP_CBAJ_G0037708.1 mouse_genomes_project 6 123204776 123204868 - Gm23244 snRNA snRNA MGP_CBAJ_T0010692.1 MGP_CBAJ_G0008830.1 mouse_genomes_project 6 141388868 141388924 - Gm27336 miRNA miRNA MGP_CBAJ_T0078955.1 MGP_CBAJ_G0030795.1 mouse_genomes_project 6 123740376 123757119 - MGP_CBAJ_P0078955 Emc3 protein_coding protein_coding MGP_CBAJ_T0078956.1 MGP_CBAJ_G0030795.1 mouse_genomes_project 6 123745294 123746412 - Emc3 protein_coding retained_intron MGP_CBAJ_T0078957.1 MGP_CBAJ_G0030795.1 mouse_genomes_project 6 123755895 123757085 - Emc3 protein_coding retained_intron MGP_CBAJ_T0015155.1 MGP_CBAJ_G0013267.1 mouse_genomes_project 6 66532059 66532296 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0080408.1 MGP_CBAJ_G0031121.1 mouse_genomes_project 6 156507164 156549000 - MGP_CBAJ_P0080408 Gm6614 protein_coding protein_coding MGP_CBAJ_T0080409.1 MGP_CBAJ_G0031121.1 mouse_genomes_project 6 156507164 156549000 - MGP_CBAJ_P0080409 Gm6614 protein_coding protein_coding MGP_CBAJ_T0080410.1 MGP_CBAJ_G0031121.1 mouse_genomes_project 6 156507515 156546331 - MGP_CBAJ_P0080410 Gm6614 protein_coding protein_coding MGP_CBAJ_T0079293.1 MGP_CBAJ_G0030856.1 mouse_genomes_project 6 130220106 130303918 - MGP_CBAJ_P0079293 Adipor2 protein_coding protein_coding MGP_CBAJ_T0079294.1 MGP_CBAJ_G0030856.1 mouse_genomes_project 6 130220721 130261429 - MGP_CBAJ_P0079294 Adipor2 protein_coding protein_coding MGP_CBAJ_T0079295.1 MGP_CBAJ_G0030856.1 mouse_genomes_project 6 130222421 130265307 - MGP_CBAJ_P0079295 Adipor2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079296.1 MGP_CBAJ_G0030856.1 mouse_genomes_project 6 130224643 130303904 - Adipor2 protein_coding retained_intron MGP_CBAJ_T0079297.1 MGP_CBAJ_G0030856.1 mouse_genomes_project 6 130239343 130303689 - MGP_CBAJ_P0079297 Adipor2 protein_coding protein_coding MGP_CBAJ_T0004836.1 MGP_CBAJ_G0004148.1 mouse_genomes_project 6 29148512 29150486 + Gm26627 antisense antisense MGP_CBAJ_T0077905.1 MGP_CBAJ_G0030593.1 mouse_genomes_project 6 89943527 90032451 + MGP_CBAJ_P0077905 Slc4a5 protein_coding protein_coding MGP_CBAJ_T0077906.1 MGP_CBAJ_G0030593.1 mouse_genomes_project 6 89955992 89984263 + Slc4a5 protein_coding processed_transcript MGP_CBAJ_T0077907.1 MGP_CBAJ_G0030593.1 mouse_genomes_project 6 89956177 90033638 + MGP_CBAJ_P0077907 Slc4a5 protein_coding protein_coding MGP_CBAJ_T0077908.1 MGP_CBAJ_G0030593.1 mouse_genomes_project 6 90001508 90014913 + Slc4a5 protein_coding processed_transcript MGP_CBAJ_T0077909.1 MGP_CBAJ_G0030593.1 mouse_genomes_project 6 90014096 90025438 + Slc4a5 protein_coding processed_transcript MGP_CBAJ_T0008482.1 MGP_CBAJ_G0006850.1 mouse_genomes_project 6 50976206 50981953 + Gm7932 lincRNA lincRNA MGP_CBAJ_T0008483.1 MGP_CBAJ_G0006850.1 mouse_genomes_project 6 50976301 50980314 + Gm7932 lincRNA lincRNA MGP_CBAJ_T0002665.1 MGP_CBAJ_G0002545.1 mouse_genomes_project 6 42184011 42184301 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0015272.1 MGP_CBAJ_G0013384.1 mouse_genomes_project 6 102211901 102212665 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005043.1 MGP_CBAJ_G0004299.1 mouse_genomes_project 6 160075117 160080309 + Gm15543 antisense antisense MGP_CBAJ_T0000165.1 MGP_CBAJ_G0000124.1 mouse_genomes_project 6 73406435 73406906 - MGP_CBAJ_P0000165 Igkv10-94 IG_V_gene IG_V_gene MGP_CBAJ_T0076779.1 MGP_CBAJ_G0030311.1 mouse_genomes_project 6 43223063 43228014 + MGP_CBAJ_P0076779 Sval3 protein_coding protein_coding MGP_CBAJ_T0076213.1 MGP_CBAJ_G0030193.1 mouse_genomes_project 6 28926983 28934581 + Fam71f1 protein_coding processed_transcript MGP_CBAJ_T0076214.1 MGP_CBAJ_G0030193.1 mouse_genomes_project 6 28926983 28943856 + MGP_CBAJ_P0076214 Fam71f1 protein_coding protein_coding MGP_CBAJ_T0076215.1 MGP_CBAJ_G0030193.1 mouse_genomes_project 6 28927000 28943691 + MGP_CBAJ_P0076215 Fam71f1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076216.1 MGP_CBAJ_G0030193.1 mouse_genomes_project 6 28927000 28943691 + MGP_CBAJ_P0076216 Fam71f1 protein_coding protein_coding MGP_CBAJ_T0076217.1 MGP_CBAJ_G0030193.1 mouse_genomes_project 6 28927042 28943691 + MGP_CBAJ_P0076217 Fam71f1 protein_coding protein_coding MGP_CBAJ_T0010648.1 MGP_CBAJ_G0008786.1 mouse_genomes_project 6 74354152 74354211 + miRNA miRNA MGP_CBAJ_T0099435.1 MGP_CBAJ_G0037690.1 mouse_genomes_project 6 70268542 70268642 - Gm23625 snRNA snRNA MGP_CBAJ_T0077215.1 MGP_CBAJ_G0030425.1 mouse_genomes_project 6 56634092 56749063 - MGP_CBAJ_P0077215 Cpvl protein_coding protein_coding MGP_CBAJ_T0077216.1 MGP_CBAJ_G0030425.1 mouse_genomes_project 6 56634192 56749054 - MGP_CBAJ_P0077216 Cpvl protein_coding protein_coding MGP_CBAJ_T0077217.1 MGP_CBAJ_G0030425.1 mouse_genomes_project 6 56634192 56749054 - MGP_CBAJ_P0077217 Cpvl protein_coding protein_coding MGP_CBAJ_T0077378.1 MGP_CBAJ_G0030472.1 mouse_genomes_project 6 61113518 61114553 - MGP_CBAJ_P0077378 Vmn1r21 protein_coding protein_coding MGP_CBAJ_T0077379.1 MGP_CBAJ_G0030472.1 mouse_genomes_project 6 61114189 61120407 - MGP_CBAJ_P0077379 Vmn1r21 protein_coding protein_coding MGP_CBAJ_T0077380.1 MGP_CBAJ_G0030472.1 mouse_genomes_project 6 61114196 61120409 - MGP_CBAJ_P0077380 Vmn1r21 protein_coding protein_coding MGP_CBAJ_T0005543.1 MGP_CBAJ_G0004663.1 mouse_genomes_project 6 94954515 94961420 + E230015B07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_CBAJ_T0005544.1 MGP_CBAJ_G0004663.1 mouse_genomes_project 6 94954563 94962371 + E230015B07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_CBAJ_T0005545.1 MGP_CBAJ_G0004663.1 mouse_genomes_project 6 94954563 94963158 + E230015B07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_CBAJ_T0008403.1 MGP_CBAJ_G0006798.1 mouse_genomes_project 6 8428641 8436534 - AA545190 lincRNA lincRNA MGP_CBAJ_T0008404.1 MGP_CBAJ_G0006798.1 mouse_genomes_project 6 8429080 8436509 - AA545190 lincRNA lincRNA MGP_CBAJ_T0008405.1 MGP_CBAJ_G0006798.1 mouse_genomes_project 6 8429139 8431460 - AA545190 lincRNA lincRNA MGP_CBAJ_T0080405.1 MGP_CBAJ_G0031120.1 mouse_genomes_project 6 156428978 156470672 - MGP_CBAJ_P0080405 Slco1a1 protein_coding protein_coding MGP_CBAJ_T0080406.1 MGP_CBAJ_G0031120.1 mouse_genomes_project 6 156429549 156470824 - MGP_CBAJ_P0080406 Slco1a1 protein_coding protein_coding MGP_CBAJ_T0080407.1 MGP_CBAJ_G0031120.1 mouse_genomes_project 6 156445663 156470678 - Slco1a1 protein_coding retained_intron MGP_CBAJ_T0079684.1 MGP_CBAJ_G0030936.1 mouse_genomes_project 6 136580364 136585866 - MGP_CBAJ_P0079684 Gpr162 protein_coding protein_coding MGP_CBAJ_T0079685.1 MGP_CBAJ_G0030936.1 mouse_genomes_project 6 136580367 136585661 - Gpr162 protein_coding retained_intron MGP_CBAJ_T0079686.1 MGP_CBAJ_G0030936.1 mouse_genomes_project 6 136580368 136585932 - MGP_CBAJ_P0079686 Gpr162 protein_coding protein_coding MGP_CBAJ_T0079687.1 MGP_CBAJ_G0030936.1 mouse_genomes_project 6 136583679 136585661 - Gpr162 protein_coding processed_transcript MGP_CBAJ_T0002068.1 MGP_CBAJ_G0001984.1 mouse_genomes_project 6 110025612 110028297 - TEC TEC MGP_CBAJ_T0015268.1 MGP_CBAJ_G0013380.1 mouse_genomes_project 6 99917227 99917703 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0077955.1 MGP_CBAJ_G0030601.1 mouse_genomes_project 6 90431670 90442744 - MGP_CBAJ_P0077955 Clec4f protein_coding protein_coding MGP_CBAJ_T0077956.1 MGP_CBAJ_G0030601.1 mouse_genomes_project 6 90432345 90442678 - Clec4f protein_coding processed_transcript MGP_CBAJ_T0075743.1 MGP_CBAJ_G0030096.1 mouse_genomes_project 6 447522 528171 - MGP_CBAJ_P0075743 Calcr protein_coding protein_coding MGP_CBAJ_T0075744.1 MGP_CBAJ_G0030096.1 mouse_genomes_project 6 447562 529255 - MGP_CBAJ_P0075744 Calcr protein_coding protein_coding MGP_CBAJ_T0075745.1 MGP_CBAJ_G0030096.1 mouse_genomes_project 6 447575 529199 - MGP_CBAJ_P0075745 Calcr protein_coding protein_coding MGP_CBAJ_T0075746.1 MGP_CBAJ_G0030096.1 mouse_genomes_project 6 448664 517559 - MGP_CBAJ_P0075746 Calcr protein_coding protein_coding MGP_CBAJ_T0075747.1 MGP_CBAJ_G0030096.1 mouse_genomes_project 6 448664 517559 - MGP_CBAJ_P0075747 Calcr protein_coding protein_coding MGP_CBAJ_T0078300.1 MGP_CBAJ_G0030666.1 mouse_genomes_project 6 95222032 95244695 + MGP_CBAJ_P0078300 Hmces protein_coding protein_coding MGP_CBAJ_T0078301.1 MGP_CBAJ_G0030666.1 mouse_genomes_project 6 95222047 95241114 + Hmces protein_coding processed_transcript MGP_CBAJ_T0078302.1 MGP_CBAJ_G0030666.1 mouse_genomes_project 6 95222055 95223101 + Hmces protein_coding processed_transcript MGP_CBAJ_T0078303.1 MGP_CBAJ_G0030666.1 mouse_genomes_project 6 95222076 95229649 + MGP_CBAJ_P0078303 Hmces protein_coding nonsense_mediated_decay MGP_CBAJ_T0078304.1 MGP_CBAJ_G0030666.1 mouse_genomes_project 6 95222403 95244695 + MGP_CBAJ_P0078304 Hmces protein_coding protein_coding MGP_CBAJ_T0078305.1 MGP_CBAJ_G0030666.1 mouse_genomes_project 6 95226021 95241491 + Hmces protein_coding processed_transcript MGP_CBAJ_T0078306.1 MGP_CBAJ_G0030666.1 mouse_genomes_project 6 95241058 95244595 + Hmces protein_coding retained_intron MGP_CBAJ_T0015045.1 MGP_CBAJ_G0013157.1 mouse_genomes_project 6 17214091 17215178 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0078774.1 MGP_CBAJ_G0030765.1 mouse_genomes_project 6 117647280 117740849 - MGP_CBAJ_P0078774 Sumf1 protein_coding protein_coding MGP_CBAJ_T0078775.1 MGP_CBAJ_G0030765.1 mouse_genomes_project 6 117648599 117669656 - Sumf1 protein_coding processed_transcript MGP_CBAJ_T0078776.1 MGP_CBAJ_G0030765.1 mouse_genomes_project 6 117648728 117740823 - MGP_CBAJ_P0078776 Sumf1 protein_coding protein_coding MGP_CBAJ_T0078777.1 MGP_CBAJ_G0030765.1 mouse_genomes_project 6 117648728 117740823 - MGP_CBAJ_P0078777 Sumf1 protein_coding protein_coding MGP_CBAJ_T0078778.1 MGP_CBAJ_G0030765.1 mouse_genomes_project 6 117661343 117696351 - MGP_CBAJ_P0078778 Sumf1 protein_coding protein_coding MGP_CBAJ_T0078779.1 MGP_CBAJ_G0030765.1 mouse_genomes_project 6 117695968 117705637 - Sumf1 protein_coding retained_intron MGP_CBAJ_T0099417.1 MGP_CBAJ_G0037672.1 mouse_genomes_project 6 19730112 19730215 + Gm26373 snRNA snRNA MGP_CBAJ_T0008456.1 MGP_CBAJ_G0006835.1 mouse_genomes_project 6 35567535 35580668 + 1810058I24Rik lincRNA lincRNA MGP_CBAJ_T0008457.1 MGP_CBAJ_G0006835.1 mouse_genomes_project 6 35567597 35576492 + 1810058I24Rik lincRNA lincRNA MGP_CBAJ_T0008458.1 MGP_CBAJ_G0006835.1 mouse_genomes_project 6 35567613 35576809 + 1810058I24Rik lincRNA lincRNA MGP_CBAJ_T0005011.1 MGP_CBAJ_G0004272.1 mouse_genomes_project 6 140620409 140622981 + Gm26770 antisense antisense MGP_CBAJ_T0077008.1 MGP_CBAJ_G0030376.1 mouse_genomes_project 6 50798784 50805405 - MGP_CBAJ_P0077008 Gimap6 protein_coding protein_coding MGP_CBAJ_T0077009.1 MGP_CBAJ_G0030376.1 mouse_genomes_project 6 50798785 50805393 - MGP_CBAJ_P0077009 Gimap6 protein_coding protein_coding MGP_CBAJ_T0077010.1 MGP_CBAJ_G0030376.1 mouse_genomes_project 6 50800947 50805376 - MGP_CBAJ_P0077010 Gimap6 protein_coding protein_coding MGP_CBAJ_T0077011.1 MGP_CBAJ_G0030376.1 mouse_genomes_project 6 50801635 50803451 - Gimap6 protein_coding processed_transcript MGP_CBAJ_T0002612.1 MGP_CBAJ_G0002500.1 mouse_genomes_project 6 42144840 42145496 + MGP_CBAJ_P0002612 Trbv2 TR_V_gene TR_V_gene MGP_CBAJ_T0079181.1 MGP_CBAJ_G0030834.1 mouse_genomes_project 6 127012201 127017322 + MGP_CBAJ_P0079181 Olfr211 protein_coding protein_coding MGP_CBAJ_T0079182.1 MGP_CBAJ_G0030834.1 mouse_genomes_project 6 127016392 127017322 + MGP_CBAJ_P0079182 Olfr211 protein_coding protein_coding MGP_CBAJ_T0002149.1 MGP_CBAJ_G0002064.1 mouse_genomes_project 6 163599506 163604953 - TEC TEC MGP_CBAJ_T0008595.1 MGP_CBAJ_G0006936.1 mouse_genomes_project 6 117137779 117142545 + 4933431M02Rik lincRNA lincRNA MGP_CBAJ_T0015349.1 MGP_CBAJ_G0013461.1 mouse_genomes_project 6 132846387 132847137 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008551.1 MGP_CBAJ_G0006903.1 mouse_genomes_project 6 93713407 93714091 - Gm43936 lincRNA lincRNA MGP_CBAJ_T0000285.1 MGP_CBAJ_G0000230.1 mouse_genomes_project 6 74049836 74050312 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0100701.1 MGP_CBAJ_G0038956.1 mouse_genomes_project 6 135363617 135363744 - Gm22724 snoRNA snoRNA MGP_CBAJ_T0001884.1 MGP_CBAJ_G0001800.1 mouse_genomes_project 6 10577248 10578191 + TEC TEC MGP_CBAJ_T0001917.1 MGP_CBAJ_G0001833.1 mouse_genomes_project 6 41111115 41113566 + TEC TEC MGP_CBAJ_T0008500.1 MGP_CBAJ_G0006862.1 mouse_genomes_project 6 54857902 54862729 + Hottip lincRNA lincRNA MGP_CBAJ_T0008501.1 MGP_CBAJ_G0006862.1 mouse_genomes_project 6 54857911 54862205 + Hottip lincRNA lincRNA MGP_CBAJ_T0015121.1 MGP_CBAJ_G0013233.1 mouse_genomes_project 6 51661761 51662585 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015376.1 MGP_CBAJ_G0013488.1 mouse_genomes_project 6 139350472 139351744 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004878.1 MGP_CBAJ_G0004180.1 mouse_genomes_project 6 54910384 54916824 - Evx1os antisense antisense MGP_CBAJ_T0004879.1 MGP_CBAJ_G0004180.1 mouse_genomes_project 6 54912831 54915497 - Evx1os antisense antisense MGP_CBAJ_T0002021.1 MGP_CBAJ_G0001937.1 mouse_genomes_project 6 94599842 94600624 - TEC TEC MGP_CBAJ_T0004944.1 MGP_CBAJ_G0004221.1 mouse_genomes_project 6 95811025 95811850 + Gm44264 antisense antisense MGP_CBAJ_T0078715.1 MGP_CBAJ_G0030751.1 mouse_genomes_project 6 108827698 108894512 - MGP_CBAJ_P0078715 Rybp protein_coding protein_coding MGP_CBAJ_T0078716.1 MGP_CBAJ_G0030751.1 mouse_genomes_project 6 108830644 108831765 - Rybp protein_coding retained_intron MGP_CBAJ_T0078717.1 MGP_CBAJ_G0030751.1 mouse_genomes_project 6 108831727 108890491 - Rybp protein_coding retained_intron MGP_CBAJ_T0015165.1 MGP_CBAJ_G0013277.1 mouse_genomes_project 6 69375931 69377332 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015073.1 MGP_CBAJ_G0013185.1 mouse_genomes_project 6 35047935 35048631 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100714.1 MGP_CBAJ_G0038969.1 mouse_genomes_project 6 159659369 159659502 - Gm22792 snoRNA snoRNA MGP_CBAJ_T0008597.1 MGP_CBAJ_G0006938.1 mouse_genomes_project 6 122821599 122835517 + lincRNA lincRNA MGP_CBAJ_T0080274.1 MGP_CBAJ_G0031098.1 mouse_genomes_project 6 150888341 151022684 - MGP_CBAJ_P0080274 Rerg protein_coding protein_coding MGP_CBAJ_T0080275.1 MGP_CBAJ_G0031098.1 mouse_genomes_project 6 150888347 151021906 - MGP_CBAJ_P0080275 Rerg protein_coding protein_coding MGP_CBAJ_T0080276.1 MGP_CBAJ_G0031098.1 mouse_genomes_project 6 150889619 151021859 - MGP_CBAJ_P0080276 Rerg protein_coding protein_coding MGP_CBAJ_T0080277.1 MGP_CBAJ_G0031098.1 mouse_genomes_project 6 150889909 150986428 - MGP_CBAJ_P0080277 Rerg protein_coding protein_coding MGP_CBAJ_T0080278.1 MGP_CBAJ_G0031098.1 mouse_genomes_project 6 150964070 151021882 - MGP_CBAJ_P0080278 Rerg protein_coding protein_coding MGP_CBAJ_T0015446.1 MGP_CBAJ_G0013558.1 mouse_genomes_project 6 164343684 164344007 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0079104.1 MGP_CBAJ_G0030824.1 mouse_genomes_project 6 126293754 126364623 + MGP_CBAJ_P0079104 Ift122 protein_coding protein_coding MGP_CBAJ_T0079105.1 MGP_CBAJ_G0030824.1 mouse_genomes_project 6 126293814 126364614 + MGP_CBAJ_P0079105 Ift122 protein_coding protein_coding MGP_CBAJ_T0079106.1 MGP_CBAJ_G0030824.1 mouse_genomes_project 6 126293864 126364617 + MGP_CBAJ_P0079106 Ift122 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079107.1 MGP_CBAJ_G0030824.1 mouse_genomes_project 6 126293872 126296367 + Ift122 protein_coding retained_intron MGP_CBAJ_T0079108.1 MGP_CBAJ_G0030824.1 mouse_genomes_project 6 126293919 126364254 + MGP_CBAJ_P0079108 Ift122 protein_coding protein_coding MGP_CBAJ_T0079109.1 MGP_CBAJ_G0030824.1 mouse_genomes_project 6 126293929 126314825 + Ift122 protein_coding processed_transcript MGP_CBAJ_T0079110.1 MGP_CBAJ_G0030824.1 mouse_genomes_project 6 126316794 126326798 + Ift122 protein_coding processed_transcript MGP_CBAJ_T0079111.1 MGP_CBAJ_G0030824.1 mouse_genomes_project 6 126325414 126326803 + Ift122 protein_coding processed_transcript MGP_CBAJ_T0079112.1 MGP_CBAJ_G0030824.1 mouse_genomes_project 6 126326582 126328273 + Ift122 protein_coding retained_intron MGP_CBAJ_T0079113.1 MGP_CBAJ_G0030824.1 mouse_genomes_project 6 126333347 126338974 + Ift122 protein_coding retained_intron MGP_CBAJ_T0079114.1 MGP_CBAJ_G0030824.1 mouse_genomes_project 6 126338465 126364618 + Ift122 protein_coding processed_transcript MGP_CBAJ_T0079115.1 MGP_CBAJ_G0030824.1 mouse_genomes_project 6 126341988 126364619 + Ift122 protein_coding retained_intron MGP_CBAJ_T0002122.1 MGP_CBAJ_G0002037.1 mouse_genomes_project 6 147999080 147999770 + TEC TEC MGP_CBAJ_T0015369.1 MGP_CBAJ_G0013481.1 mouse_genomes_project 6 137614351 137614741 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002015.1 MGP_CBAJ_G0001931.1 mouse_genomes_project 6 94137715 94139210 + TEC TEC MGP_CBAJ_T0004980.1 MGP_CBAJ_G0004243.1 mouse_genomes_project 6 123514621 123532756 - Gm15492 antisense antisense MGP_CBAJ_T0098448.1 MGP_CBAJ_G0036710.1 mouse_genomes_project 6 151358098 151358406 + Gm44258 sense_intronic sense_intronic MGP_CBAJ_T0004945.1 MGP_CBAJ_G0004222.1 mouse_genomes_project 6 95876010 95876683 + Gm44170 antisense antisense MGP_CBAJ_T0002108.1 MGP_CBAJ_G0002023.1 mouse_genomes_project 6 139914030 139916279 - TEC TEC MGP_CBAJ_T0015027.1 MGP_CBAJ_G0013139.1 mouse_genomes_project 6 9679981 9680279 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000162.1 MGP_CBAJ_G0000122.1 mouse_genomes_project 6 73309164 73309644 - MGP_CBAJ_P0000162 Igkv10-96 IG_V_gene IG_V_gene MGP_CBAJ_T0002525.1 MGP_CBAJ_G0002429.1 mouse_genomes_project 6 42760008 42760061 + MGP_CBAJ_P0002525 Trbj1-6 TR_J_gene TR_J_gene MGP_CBAJ_T0000204.1 MGP_CBAJ_G0000153.1 mouse_genomes_project 6 75835963 75836552 + MGP_CBAJ_P0000204 IG_V_gene IG_V_gene MGP_CBAJ_T0000205.1 MGP_CBAJ_G0000153.1 mouse_genomes_project 6 75836253 75836552 + MGP_CBAJ_P0000205 IG_V_gene IG_V_gene MGP_CBAJ_T0015372.1 MGP_CBAJ_G0013484.1 mouse_genomes_project 6 139005667 139006398 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0077617.1 MGP_CBAJ_G0030534.1 mouse_genomes_project 6 77302727 77351992 + MGP_CBAJ_P0077617 Polr1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0077618.1 MGP_CBAJ_G0030534.1 mouse_genomes_project 6 77302735 77373704 + MGP_CBAJ_P0077618 Polr1a protein_coding protein_coding MGP_CBAJ_T0077619.1 MGP_CBAJ_G0030534.1 mouse_genomes_project 6 77302743 77318515 + Polr1a protein_coding retained_intron MGP_CBAJ_T0077620.1 MGP_CBAJ_G0030534.1 mouse_genomes_project 6 77305523 77351877 + Polr1a protein_coding retained_intron MGP_CBAJ_T0077621.1 MGP_CBAJ_G0030534.1 mouse_genomes_project 6 77323267 77323885 + Polr1a protein_coding retained_intron MGP_CBAJ_T0077622.1 MGP_CBAJ_G0030534.1 mouse_genomes_project 6 77328376 77328961 + Polr1a protein_coding retained_intron MGP_CBAJ_T0077623.1 MGP_CBAJ_G0030534.1 mouse_genomes_project 6 77333172 77338530 + Polr1a protein_coding processed_transcript MGP_CBAJ_T0077624.1 MGP_CBAJ_G0030534.1 mouse_genomes_project 6 77345219 77351678 + MGP_CBAJ_P0077624 Polr1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0077625.1 MGP_CBAJ_G0030534.1 mouse_genomes_project 6 77345220 77346620 + Polr1a protein_coding retained_intron MGP_CBAJ_T0077626.1 MGP_CBAJ_G0030534.1 mouse_genomes_project 6 77353016 77379389 + MGP_CBAJ_P0077626 Polr1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0102027.1 MGP_CBAJ_G0040057.1 mouse_genomes_project 6 141373766 141373880 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0075727.1 MGP_CBAJ_G0030093.1 mouse_genomes_project 6 84317 89342 - MGP_CBAJ_P0075727 Samd9l protein_coding protein_coding MGP_CBAJ_T0075728.1 MGP_CBAJ_G0030093.1 mouse_genomes_project 6 89010 97069 - MGP_CBAJ_P0075728 Samd9l protein_coding protein_coding MGP_CBAJ_T0015295.1 MGP_CBAJ_G0013407.1 mouse_genomes_project 6 111583934 111586036 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015009.1 MGP_CBAJ_G0013121.1 mouse_genomes_project 6 1706517 1706689 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015405.1 MGP_CBAJ_G0013517.1 mouse_genomes_project 6 145465971 145466460 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100674.1 MGP_CBAJ_G0038929.1 mouse_genomes_project 6 72299621 72299759 - Gm22425 snoRNA snoRNA MGP_CBAJ_T0002623.1 MGP_CBAJ_G0002510.1 mouse_genomes_project 6 42252447 42252918 + MGP_CBAJ_P0002623 Trbv15 TR_V_gene TR_V_gene MGP_CBAJ_T0078070.1 MGP_CBAJ_G0030621.1 mouse_genomes_project 6 92491711 92508673 + MGP_CBAJ_P0078070 Cct7 protein_coding protein_coding MGP_CBAJ_T0078071.1 MGP_CBAJ_G0030621.1 mouse_genomes_project 6 92492216 92496100 + Cct7 protein_coding retained_intron MGP_CBAJ_T0078072.1 MGP_CBAJ_G0030621.1 mouse_genomes_project 6 92492249 92508480 + MGP_CBAJ_P0078072 Cct7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078073.1 MGP_CBAJ_G0030621.1 mouse_genomes_project 6 92492289 92508480 + MGP_CBAJ_P0078073 Cct7 protein_coding protein_coding MGP_CBAJ_T0078074.1 MGP_CBAJ_G0030621.1 mouse_genomes_project 6 92500935 92505108 + Cct7 protein_coding retained_intron MGP_CBAJ_T0078075.1 MGP_CBAJ_G0030621.1 mouse_genomes_project 6 92501968 92506135 + Cct7 protein_coding retained_intron MGP_CBAJ_T0078076.1 MGP_CBAJ_G0030621.1 mouse_genomes_project 6 92502349 92506286 + MGP_CBAJ_P0078076 Cct7 protein_coding protein_coding MGP_CBAJ_T0098075.1 MGP_CBAJ_G0036348.1 mouse_genomes_project 6 96633080 96633215 - Gm25961 rRNA rRNA MGP_CBAJ_T0015133.1 MGP_CBAJ_G0013245.1 mouse_genomes_project 6 55724960 55725500 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0076769.1 MGP_CBAJ_G0030307.1 mouse_genomes_project 6 43016161 43020383 - MGP_CBAJ_P0076769 Olfr459 protein_coding protein_coding MGP_CBAJ_T0076770.1 MGP_CBAJ_G0030307.1 mouse_genomes_project 6 43016161 43017270 - MGP_CBAJ_P0076770 Olfr459 protein_coding protein_coding MGP_CBAJ_T0077241.1 MGP_CBAJ_G0030429.1 mouse_genomes_project 6 57321784 57329965 - MGP_CBAJ_P0077241 Scrn1 protein_coding protein_coding MGP_CBAJ_T0077242.1 MGP_CBAJ_G0030429.1 mouse_genomes_project 6 57326509 57391727 - MGP_CBAJ_P0077242 Scrn1 protein_coding protein_coding MGP_CBAJ_T0077243.1 MGP_CBAJ_G0030429.1 mouse_genomes_project 6 57326884 57343465 - MGP_CBAJ_P0077243 Scrn1 protein_coding protein_coding MGP_CBAJ_T0077244.1 MGP_CBAJ_G0030429.1 mouse_genomes_project 6 57329711 57335421 - Scrn1 protein_coding retained_intron MGP_CBAJ_T0077245.1 MGP_CBAJ_G0030429.1 mouse_genomes_project 6 57359382 57379654 - MGP_CBAJ_P0077245 Scrn1 protein_coding protein_coding MGP_CBAJ_T0077246.1 MGP_CBAJ_G0030429.1 mouse_genomes_project 6 57376916 57379645 - Scrn1 protein_coding processed_transcript MGP_CBAJ_T0011513.1 MGP_CBAJ_G0009651.1 mouse_genomes_project 6 54727176 54727301 + Gm27867 misc_RNA misc_RNA MGP_CBAJ_T0080126.1 MGP_CBAJ_G0031061.1 mouse_genomes_project 6 146172915 146173916 - MGP_CBAJ_P0080126 Tas2r140 protein_coding protein_coding MGP_CBAJ_T0076451.1 MGP_CBAJ_G0030230.1 mouse_genomes_project 6 34461051 34466216 - Akr1b3 protein_coding retained_intron MGP_CBAJ_T0076452.1 MGP_CBAJ_G0030230.1 mouse_genomes_project 6 34462551 34479668 - MGP_CBAJ_P0076452 Akr1b3 protein_coding protein_coding MGP_CBAJ_T0076453.1 MGP_CBAJ_G0030230.1 mouse_genomes_project 6 34466381 34479631 - Akr1b3 protein_coding retained_intron MGP_CBAJ_T0076454.1 MGP_CBAJ_G0030230.1 mouse_genomes_project 6 34468551 34479620 - Akr1b3 protein_coding retained_intron MGP_CBAJ_T0076455.1 MGP_CBAJ_G0030230.1 mouse_genomes_project 6 34472794 34479649 - MGP_CBAJ_P0076455 Akr1b3 protein_coding protein_coding MGP_CBAJ_T0080119.1 MGP_CBAJ_G0031054.1 mouse_genomes_project 6 145995699 145996636 - MGP_CBAJ_P0080119 Tas2r125 protein_coding protein_coding MGP_CBAJ_T0000150.1 MGP_CBAJ_G0000114.1 mouse_genomes_project 6 72844843 72845569 + MGP_CBAJ_P0000150 Igkv2-112 IG_V_gene IG_V_gene MGP_CBAJ_T0000151.1 MGP_CBAJ_G0000114.1 mouse_genomes_project 6 72844843 72845569 + MGP_CBAJ_P0000151 Igkv2-112 IG_V_gene IG_V_gene MGP_CBAJ_T0080113.1 MGP_CBAJ_G0031048.1 mouse_genomes_project 6 145848974 145849904 + MGP_CBAJ_P0080113 Tas2r124 protein_coding protein_coding MGP_CBAJ_T0001900.1 MGP_CBAJ_G0001816.1 mouse_genomes_project 6 27708966 27712892 - TEC TEC MGP_CBAJ_T0079827.1 MGP_CBAJ_G0030961.1 mouse_genomes_project 6 137273105 137318033 - MGP_CBAJ_P0079827 Cd9 protein_coding protein_coding MGP_CBAJ_T0079828.1 MGP_CBAJ_G0030961.1 mouse_genomes_project 6 137273428 137294466 - Cd9 protein_coding processed_transcript MGP_CBAJ_T0079829.1 MGP_CBAJ_G0030961.1 mouse_genomes_project 6 137274955 137275906 - Cd9 protein_coding retained_intron MGP_CBAJ_T0015207.1 MGP_CBAJ_G0013319.1 mouse_genomes_project 6 75386940 75391722 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015147.1 MGP_CBAJ_G0013259.1 mouse_genomes_project 6 63444418 63445376 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015174.1 MGP_CBAJ_G0013286.1 mouse_genomes_project 6 70259406 70260982 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0077446.1 MGP_CBAJ_G0030494.1 mouse_genomes_project 6 69165359 69187637 + MGP_CBAJ_P0077446 Smarcad1 protein_coding protein_coding MGP_CBAJ_T0077447.1 MGP_CBAJ_G0030494.1 mouse_genomes_project 6 69165385 69254811 + MGP_CBAJ_P0077447 Smarcad1 protein_coding protein_coding MGP_CBAJ_T0077448.1 MGP_CBAJ_G0030494.1 mouse_genomes_project 6 69165397 69166338 + Smarcad1 protein_coding retained_intron MGP_CBAJ_T0077449.1 MGP_CBAJ_G0030494.1 mouse_genomes_project 6 69165443 69166908 + MGP_CBAJ_P0077449 Smarcad1 protein_coding protein_coding MGP_CBAJ_T0077450.1 MGP_CBAJ_G0030494.1 mouse_genomes_project 6 69165612 69166980 + MGP_CBAJ_P0077450 Smarcad1 protein_coding protein_coding MGP_CBAJ_T0077451.1 MGP_CBAJ_G0030494.1 mouse_genomes_project 6 69165634 69183758 + MGP_CBAJ_P0077451 Smarcad1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077452.1 MGP_CBAJ_G0030494.1 mouse_genomes_project 6 69165642 69183847 + MGP_CBAJ_P0077452 Smarcad1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077453.1 MGP_CBAJ_G0030494.1 mouse_genomes_project 6 69165655 69222057 + Smarcad1 protein_coding processed_transcript MGP_CBAJ_T0077454.1 MGP_CBAJ_G0030494.1 mouse_genomes_project 6 69165989 69254348 + MGP_CBAJ_P0077454 Smarcad1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077455.1 MGP_CBAJ_G0030494.1 mouse_genomes_project 6 69183880 69200191 + Smarcad1 protein_coding retained_intron MGP_CBAJ_T0077456.1 MGP_CBAJ_G0030494.1 mouse_genomes_project 6 69188812 69211284 + Smarcad1 protein_coding processed_transcript MGP_CBAJ_T0077457.1 MGP_CBAJ_G0030494.1 mouse_genomes_project 6 69211449 69234506 + MGP_CBAJ_P0077457 Smarcad1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077458.1 MGP_CBAJ_G0030494.1 mouse_genomes_project 6 69215484 69220933 + Smarcad1 protein_coding retained_intron MGP_CBAJ_T0077459.1 MGP_CBAJ_G0030494.1 mouse_genomes_project 6 69238576 69239219 + Smarcad1 protein_coding retained_intron MGP_CBAJ_T0077460.1 MGP_CBAJ_G0030494.1 mouse_genomes_project 6 69246203 69248728 + Smarcad1 protein_coding retained_intron MGP_CBAJ_T0004922.1 MGP_CBAJ_G0004210.1 mouse_genomes_project 6 93106563 93155491 + Gm19265 antisense antisense MGP_CBAJ_T0001956.1 MGP_CBAJ_G0001872.1 mouse_genomes_project 6 60023700 60024372 - TEC TEC MGP_CBAJ_T0015347.1 MGP_CBAJ_G0013459.1 mouse_genomes_project 6 132749175 132749448 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008411.1 MGP_CBAJ_G0006803.1 mouse_genomes_project 6 14888499 14904317 + Gm36669 lincRNA lincRNA MGP_CBAJ_T0098449.1 MGP_CBAJ_G0036711.1 mouse_genomes_project 6 159501906 159504200 - Sox5it sense_intronic sense_intronic MGP_CBAJ_T0077095.1 MGP_CBAJ_G0030397.1 mouse_genomes_project 6 52514912 52519540 - Dfna5 protein_coding retained_intron MGP_CBAJ_T0077096.1 MGP_CBAJ_G0030397.1 mouse_genomes_project 6 52515389 52599777 - MGP_CBAJ_P0077096 Dfna5 protein_coding protein_coding MGP_CBAJ_T0077098.1 MGP_CBAJ_G0030397.1 mouse_genomes_project 6 52527976 52599769 - MGP_CBAJ_P0077098 Dfna5 protein_coding protein_coding MGP_CBAJ_T0077099.1 MGP_CBAJ_G0030397.1 mouse_genomes_project 6 52535360 52601884 - MGP_CBAJ_P0077099 Dfna5 protein_coding protein_coding MGP_CBAJ_T0077100.1 MGP_CBAJ_G0030397.1 mouse_genomes_project 6 52535362 52599791 - MGP_CBAJ_P0077100 Dfna5 protein_coding protein_coding MGP_CBAJ_T0077101.1 MGP_CBAJ_G0030397.1 mouse_genomes_project 6 52575894 52600048 - MGP_CBAJ_P0077101 Dfna5 protein_coding protein_coding MGP_CBAJ_T0077102.1 MGP_CBAJ_G0030397.1 mouse_genomes_project 6 52597402 52599997 - Dfna5 protein_coding retained_intron MGP_CBAJ_T0100651.1 MGP_CBAJ_G0038906.1 mouse_genomes_project 6 19591681 19591812 - Gm23960 snoRNA snoRNA MGP_CBAJ_T0000134.1 MGP_CBAJ_G0000102.1 mouse_genomes_project 6 72209496 72210256 + MGP_CBAJ_P0000134 Igkv1-133 IG_V_gene IG_V_gene MGP_CBAJ_T0077284.1 MGP_CBAJ_G0030438.1 mouse_genomes_project 6 58087196 58091752 - MGP_CBAJ_P0077284 Inmt protein_coding protein_coding MGP_CBAJ_T0077285.1 MGP_CBAJ_G0030438.1 mouse_genomes_project 6 58089430 58091723 - Inmt protein_coding retained_intron MGP_CBAJ_T0077086.1 MGP_CBAJ_G0030395.1 mouse_genomes_project 6 52106277 52113065 + MGP_CBAJ_P0077086 Npy protein_coding protein_coding MGP_CBAJ_T0101977.1 MGP_CBAJ_G0040008.1 mouse_genomes_project 6 42117910 42118552 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0008474.1 MGP_CBAJ_G0006842.1 mouse_genomes_project 6 45499773 45502619 - Gm35216 lincRNA lincRNA MGP_CBAJ_T0077319.1 MGP_CBAJ_G0030447.1 mouse_genomes_project 6 59779293 59791042 - MGP_CBAJ_P0077319 Lsm5 protein_coding protein_coding MGP_CBAJ_T0077320.1 MGP_CBAJ_G0030447.1 mouse_genomes_project 6 59779295 59791009 - Lsm5 protein_coding retained_intron MGP_CBAJ_T0077321.1 MGP_CBAJ_G0030447.1 mouse_genomes_project 6 59779353 59790988 - MGP_CBAJ_P0077321 Lsm5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077322.1 MGP_CBAJ_G0030447.1 mouse_genomes_project 6 59779487 59791000 - MGP_CBAJ_P0077322 Lsm5 protein_coding protein_coding MGP_CBAJ_T0011503.1 MGP_CBAJ_G0009641.1 mouse_genomes_project 6 16165316 16165436 + Gm27402 misc_RNA misc_RNA MGP_CBAJ_T0100656.1 MGP_CBAJ_G0038911.1 mouse_genomes_project 6 28814328 28814459 + Gm26021 snoRNA snoRNA MGP_CBAJ_T0002104.1 MGP_CBAJ_G0002019.1 mouse_genomes_project 6 139389184 139391410 + TEC TEC MGP_CBAJ_T0075759.1 MGP_CBAJ_G0030101.1 mouse_genomes_project 6 1314585 1338613 + MGP_CBAJ_P0075759 Col1a2 protein_coding protein_coding MGP_CBAJ_T0075760.1 MGP_CBAJ_G0030101.1 mouse_genomes_project 6 1315228 1364647 + MGP_CBAJ_P0075760 Col1a2 protein_coding protein_coding MGP_CBAJ_T0075761.1 MGP_CBAJ_G0030101.1 mouse_genomes_project 6 1315437 1337209 + Col1a2 protein_coding retained_intron MGP_CBAJ_T0075762.1 MGP_CBAJ_G0030101.1 mouse_genomes_project 6 1315437 1336719 + Col1a2 protein_coding retained_intron MGP_CBAJ_T0075763.1 MGP_CBAJ_G0030101.1 mouse_genomes_project 6 1343740 1352557 + Col1a2 protein_coding retained_intron MGP_CBAJ_T0075764.1 MGP_CBAJ_G0030101.1 mouse_genomes_project 6 1353261 1358988 + Col1a2 protein_coding retained_intron MGP_CBAJ_T0075765.1 MGP_CBAJ_G0030101.1 mouse_genomes_project 6 1358883 1359726 + Col1a2 protein_coding retained_intron MGP_CBAJ_T0075766.1 MGP_CBAJ_G0030101.1 mouse_genomes_project 6 1360591 1361093 + Col1a2 protein_coding retained_intron MGP_CBAJ_T0079133.1 MGP_CBAJ_G0030828.1 mouse_genomes_project 6 126478144 126574040 - MGP_CBAJ_P0079133 Tmcc1 protein_coding protein_coding MGP_CBAJ_T0079134.1 MGP_CBAJ_G0030828.1 mouse_genomes_project 6 126478314 126605133 - MGP_CBAJ_P0079134 Tmcc1 protein_coding protein_coding MGP_CBAJ_T0079135.1 MGP_CBAJ_G0030828.1 mouse_genomes_project 6 126478978 126605243 - MGP_CBAJ_P0079135 Tmcc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079136.1 MGP_CBAJ_G0030828.1 mouse_genomes_project 6 126479318 126539439 - MGP_CBAJ_P0079136 Tmcc1 protein_coding protein_coding MGP_CBAJ_T0079137.1 MGP_CBAJ_G0030828.1 mouse_genomes_project 6 126479409 126609357 - MGP_CBAJ_P0079137 Tmcc1 protein_coding protein_coding MGP_CBAJ_T0079138.1 MGP_CBAJ_G0030828.1 mouse_genomes_project 6 126506739 126604716 - MGP_CBAJ_P0079138 Tmcc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079139.1 MGP_CBAJ_G0030828.1 mouse_genomes_project 6 126513531 126520049 - Tmcc1 protein_coding retained_intron MGP_CBAJ_T0079140.1 MGP_CBAJ_G0030828.1 mouse_genomes_project 6 126571097 126576577 - Tmcc1 protein_coding retained_intron MGP_CBAJ_T0079141.1 MGP_CBAJ_G0030828.1 mouse_genomes_project 6 126602471 126647585 - MGP_CBAJ_P0079141 Tmcc1 protein_coding protein_coding MGP_CBAJ_T0079142.1 MGP_CBAJ_G0030828.1 mouse_genomes_project 6 126604332 126605932 - Tmcc1 protein_coding retained_intron MGP_CBAJ_T0015242.1 MGP_CBAJ_G0013354.1 mouse_genomes_project 6 90593243 90593621 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015199.1 MGP_CBAJ_G0013311.1 mouse_genomes_project 6 72769146 72769437 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010667.1 MGP_CBAJ_G0008805.1 mouse_genomes_project 6 107487613 107487760 - miRNA miRNA MGP_CBAJ_T0015182.1 MGP_CBAJ_G0013294.1 mouse_genomes_project 6 71071443 71071900 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001967.1 MGP_CBAJ_G0001883.1 mouse_genomes_project 6 76782855 76785637 - TEC TEC MGP_CBAJ_T0099440.1 MGP_CBAJ_G0037695.1 mouse_genomes_project 6 88165096 88165255 + Gm26264 snRNA snRNA MGP_CBAJ_T0000262.1 MGP_CBAJ_G0000207.1 mouse_genomes_project 6 72438353 72438820 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0078063.1 MGP_CBAJ_G0030620.1 mouse_genomes_project 6 92487005 92491377 - MGP_CBAJ_P0078063 Pradc1 protein_coding protein_coding MGP_CBAJ_T0078064.1 MGP_CBAJ_G0030620.1 mouse_genomes_project 6 92487236 92491399 - Pradc1 protein_coding retained_intron MGP_CBAJ_T0078065.1 MGP_CBAJ_G0030620.1 mouse_genomes_project 6 92487237 92491446 - MGP_CBAJ_P0078065 Pradc1 protein_coding protein_coding MGP_CBAJ_T0078066.1 MGP_CBAJ_G0030620.1 mouse_genomes_project 6 92487410 92492143 - Pradc1 protein_coding processed_transcript MGP_CBAJ_T0078067.1 MGP_CBAJ_G0030620.1 mouse_genomes_project 6 92487735 92491422 - Pradc1 protein_coding processed_transcript MGP_CBAJ_T0078068.1 MGP_CBAJ_G0030620.1 mouse_genomes_project 6 92487750 92491454 - Pradc1 protein_coding retained_intron MGP_CBAJ_T0078069.1 MGP_CBAJ_G0030620.1 mouse_genomes_project 6 92487882 92491411 - Pradc1 protein_coding processed_transcript MGP_CBAJ_T0077631.1 MGP_CBAJ_G0030536.1 mouse_genomes_project 6 77678759 77717883 - MGP_CBAJ_P0077631 Atoh8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077632.1 MGP_CBAJ_G0030536.1 mouse_genomes_project 6 77678759 77718923 - MGP_CBAJ_P0077632 Atoh8 protein_coding protein_coding MGP_CBAJ_T0077633.1 MGP_CBAJ_G0030536.1 mouse_genomes_project 6 77703538 77718576 - Atoh8 protein_coding processed_transcript MGP_CBAJ_T0100678.1 MGP_CBAJ_G0038933.1 mouse_genomes_project 6 73194693 73194826 + Gm25833 snoRNA snoRNA MGP_CBAJ_T0076418.1 MGP_CBAJ_G0030224.1 mouse_genomes_project 6 32012885 32021260 + 1700012A03Rik protein_coding processed_transcript MGP_CBAJ_T0076419.1 MGP_CBAJ_G0030224.1 mouse_genomes_project 6 32012907 32021260 + 1700012A03Rik protein_coding processed_transcript MGP_CBAJ_T0076420.1 MGP_CBAJ_G0030224.1 mouse_genomes_project 6 32012924 32021254 + MGP_CBAJ_P0076420 1700012A03Rik protein_coding protein_coding MGP_CBAJ_T0076421.1 MGP_CBAJ_G0030224.1 mouse_genomes_project 6 32020479 32020960 + 1700012A03Rik protein_coding processed_transcript MGP_CBAJ_T0015287.1 MGP_CBAJ_G0013399.1 mouse_genomes_project 6 108380228 108382645 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004989.1 MGP_CBAJ_G0004252.1 mouse_genomes_project 6 130490168 130497270 + Gm44317 antisense antisense MGP_CBAJ_T0101971.1 MGP_CBAJ_G0040002.1 mouse_genomes_project 6 13620 22644 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0077118.1 MGP_CBAJ_G0030402.1 mouse_genomes_project 6 53941251 53950215 - MGP_CBAJ_P0077118 Hnrnpa2b1 protein_coding protein_coding MGP_CBAJ_T0077119.1 MGP_CBAJ_G0030402.1 mouse_genomes_project 6 53941440 53950168 - MGP_CBAJ_P0077119 Hnrnpa2b1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077120.1 MGP_CBAJ_G0030402.1 mouse_genomes_project 6 53941443 53950166 - MGP_CBAJ_P0077120 Hnrnpa2b1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077121.1 MGP_CBAJ_G0030402.1 mouse_genomes_project 6 53941443 53950166 - MGP_CBAJ_P0077121 Hnrnpa2b1 protein_coding protein_coding MGP_CBAJ_T0077122.1 MGP_CBAJ_G0030402.1 mouse_genomes_project 6 53941464 53943504 - Hnrnpa2b1 protein_coding retained_intron MGP_CBAJ_T0077123.1 MGP_CBAJ_G0030402.1 mouse_genomes_project 6 53943079 53950147 - MGP_CBAJ_P0077123 Hnrnpa2b1 protein_coding protein_coding MGP_CBAJ_T0077124.1 MGP_CBAJ_G0030402.1 mouse_genomes_project 6 53943079 53950093 - MGP_CBAJ_P0077124 Hnrnpa2b1 protein_coding protein_coding MGP_CBAJ_T0077125.1 MGP_CBAJ_G0030402.1 mouse_genomes_project 6 53943079 53950093 - MGP_CBAJ_P0077125 Hnrnpa2b1 protein_coding protein_coding MGP_CBAJ_T0077126.1 MGP_CBAJ_G0030402.1 mouse_genomes_project 6 53943119 53944480 - Hnrnpa2b1 protein_coding retained_intron MGP_CBAJ_T0077127.1 MGP_CBAJ_G0030402.1 mouse_genomes_project 6 53943791 53947021 - MGP_CBAJ_P0077127 Hnrnpa2b1 protein_coding protein_coding MGP_CBAJ_T0077128.1 MGP_CBAJ_G0030402.1 mouse_genomes_project 6 53944951 53946557 - Hnrnpa2b1 protein_coding retained_intron MGP_CBAJ_T0077129.1 MGP_CBAJ_G0030402.1 mouse_genomes_project 6 53945321 53946987 - Hnrnpa2b1 protein_coding retained_intron MGP_CBAJ_T0077130.1 MGP_CBAJ_G0030402.1 mouse_genomes_project 6 53946137 53950205 - Hnrnpa2b1 protein_coding retained_intron MGP_CBAJ_T0015401.1 MGP_CBAJ_G0013513.1 mouse_genomes_project 6 145051437 145051888 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099439.1 MGP_CBAJ_G0037694.1 mouse_genomes_project 6 85085095 85085259 + Gm23727 snRNA snRNA MGP_CBAJ_T0077114.1 MGP_CBAJ_G0030400.1 mouse_genomes_project 6 53028340 53032108 - MGP_CBAJ_P0077114 Npvf protein_coding protein_coding MGP_CBAJ_T0004969.1 MGP_CBAJ_G0004237.1 mouse_genomes_project 6 118076641 118083293 - Gm44040 antisense antisense MGP_CBAJ_T0077858.1 MGP_CBAJ_G0030585.1 mouse_genomes_project 6 89811006 89811906 + MGP_CBAJ_P0077858 Mrpl53 protein_coding protein_coding MGP_CBAJ_T0077859.1 MGP_CBAJ_G0030585.1 mouse_genomes_project 6 89811086 89811906 + Mrpl53 protein_coding retained_intron MGP_CBAJ_T0078981.1 MGP_CBAJ_G0030801.1 mouse_genomes_project 6 123951402 123965415 + MGP_CBAJ_P0078981 Tatdn2 protein_coding protein_coding MGP_CBAJ_T0078982.1 MGP_CBAJ_G0030801.1 mouse_genomes_project 6 123951911 123965295 + MGP_CBAJ_P0078982 Tatdn2 protein_coding protein_coding MGP_CBAJ_T0078983.1 MGP_CBAJ_G0030801.1 mouse_genomes_project 6 123952020 123964551 + MGP_CBAJ_P0078983 Tatdn2 protein_coding protein_coding MGP_CBAJ_T0078984.1 MGP_CBAJ_G0030801.1 mouse_genomes_project 6 123959165 123965412 + MGP_CBAJ_P0078984 Tatdn2 protein_coding protein_coding MGP_CBAJ_T0078985.1 MGP_CBAJ_G0030801.1 mouse_genomes_project 6 123961621 123964795 + MGP_CBAJ_P0078985 Tatdn2 protein_coding protein_coding MGP_CBAJ_T0000302.1 MGP_CBAJ_G0000247.1 mouse_genomes_project 6 75568315 75568615 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0002053.1 MGP_CBAJ_G0001969.1 mouse_genomes_project 6 100818868 100820368 + TEC TEC MGP_CBAJ_T0000266.1 MGP_CBAJ_G0000211.1 mouse_genomes_project 6 72785284 72785582 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0075800.1 MGP_CBAJ_G0030106.1 mouse_genomes_project 6 2097805 2129940 - MGP_CBAJ_P0075800 Pon1 protein_coding protein_coding MGP_CBAJ_T0075801.1 MGP_CBAJ_G0030106.1 mouse_genomes_project 6 2098210 2129778 - MGP_CBAJ_P0075801 Pon1 protein_coding protein_coding MGP_CBAJ_T0075802.1 MGP_CBAJ_G0030106.1 mouse_genomes_project 6 2103547 2129778 - MGP_CBAJ_P0075802 Pon1 protein_coding protein_coding MGP_CBAJ_T0075803.1 MGP_CBAJ_G0030106.1 mouse_genomes_project 6 2121521 2129757 - Pon1 protein_coding retained_intron MGP_CBAJ_T0076127.1 MGP_CBAJ_G0030174.1 mouse_genomes_project 6 23843265 23852962 + MGP_CBAJ_P0076127 Spam1 protein_coding protein_coding MGP_CBAJ_T0076128.1 MGP_CBAJ_G0030174.1 mouse_genomes_project 6 23843278 23852962 + MGP_CBAJ_P0076128 Spam1 protein_coding protein_coding MGP_CBAJ_T0076129.1 MGP_CBAJ_G0030174.1 mouse_genomes_project 6 23843292 23848984 + Spam1 protein_coding retained_intron MGP_CBAJ_T0076130.1 MGP_CBAJ_G0030174.1 mouse_genomes_project 6 23847757 23852962 + MGP_CBAJ_P0076130 Spam1 protein_coding protein_coding MGP_CBAJ_T0000296.1 MGP_CBAJ_G0000241.1 mouse_genomes_project 6 74908391 74908673 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0015210.1 MGP_CBAJ_G0013322.1 mouse_genomes_project 6 75451765 75460906 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0076716.1 MGP_CBAJ_G0030282.1 mouse_genomes_project 6 41492085 41505426 + MGP_CBAJ_P0076716 Ssbp1 protein_coding protein_coding MGP_CBAJ_T0076717.1 MGP_CBAJ_G0030282.1 mouse_genomes_project 6 41492148 41499324 + MGP_CBAJ_P0076717 Ssbp1 protein_coding protein_coding MGP_CBAJ_T0076718.1 MGP_CBAJ_G0030282.1 mouse_genomes_project 6 41492186 41495023 + Ssbp1 protein_coding retained_intron MGP_CBAJ_T0076719.1 MGP_CBAJ_G0030282.1 mouse_genomes_project 6 41492201 41501721 + MGP_CBAJ_P0076719 Ssbp1 protein_coding protein_coding MGP_CBAJ_T0076720.1 MGP_CBAJ_G0030282.1 mouse_genomes_project 6 41492208 41501718 + MGP_CBAJ_P0076720 Ssbp1 protein_coding protein_coding MGP_CBAJ_T0076721.1 MGP_CBAJ_G0030282.1 mouse_genomes_project 6 41492259 41497245 + MGP_CBAJ_P0076721 Ssbp1 protein_coding protein_coding MGP_CBAJ_T0076722.1 MGP_CBAJ_G0030282.1 mouse_genomes_project 6 41497212 41498187 + Ssbp1 protein_coding retained_intron MGP_CBAJ_T0015348.1 MGP_CBAJ_G0013460.1 mouse_genomes_project 6 132761782 132762170 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004867.1 MGP_CBAJ_G0004175.1 mouse_genomes_project 6 52940625 52968852 + 5430402O13Rik antisense antisense MGP_CBAJ_T0004868.1 MGP_CBAJ_G0004175.1 mouse_genomes_project 6 52940720 52968809 + 5430402O13Rik antisense antisense MGP_CBAJ_T0015230.1 MGP_CBAJ_G0013342.1 mouse_genomes_project 6 82429638 82430113 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0079560.1 MGP_CBAJ_G0030911.1 mouse_genomes_project 6 136020115 136045849 + MGP_CBAJ_P0079560 Cd163 protein_coding protein_coding MGP_CBAJ_T0079561.1 MGP_CBAJ_G0030911.1 mouse_genomes_project 6 136020159 136045849 + MGP_CBAJ_P0079561 Cd163 protein_coding protein_coding MGP_CBAJ_T0079562.1 MGP_CBAJ_G0030911.1 mouse_genomes_project 6 136035812 136045841 + Cd163 protein_coding retained_intron MGP_CBAJ_T0015146.1 MGP_CBAJ_G0013258.1 mouse_genomes_project 6 62621335 62621539 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001886.1 MGP_CBAJ_G0001802.1 mouse_genomes_project 6 13809394 13811130 + TEC TEC MGP_CBAJ_T0078273.1 MGP_CBAJ_G0030663.1 mouse_genomes_project 6 95114707 95146853 - MGP_CBAJ_P0078273 Isy1 protein_coding protein_coding MGP_CBAJ_T0078274.1 MGP_CBAJ_G0030663.1 mouse_genomes_project 6 95124357 95146793 - MGP_CBAJ_P0078274 Isy1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078275.1 MGP_CBAJ_G0030663.1 mouse_genomes_project 6 95124427 95125404 - Isy1 protein_coding retained_intron MGP_CBAJ_T0078276.1 MGP_CBAJ_G0030663.1 mouse_genomes_project 6 95125241 95146755 - MGP_CBAJ_P0078276 Isy1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078277.1 MGP_CBAJ_G0030663.1 mouse_genomes_project 6 95128105 95146811 - Isy1 protein_coding retained_intron MGP_CBAJ_T0078278.1 MGP_CBAJ_G0030663.1 mouse_genomes_project 6 95129884 95146768 - Isy1 protein_coding retained_intron MGP_CBAJ_T0078279.1 MGP_CBAJ_G0030663.1 mouse_genomes_project 6 95130489 95146802 - MGP_CBAJ_P0078279 Isy1 protein_coding protein_coding MGP_CBAJ_T0078280.1 MGP_CBAJ_G0030663.1 mouse_genomes_project 6 95141613 95146811 - Isy1 protein_coding retained_intron MGP_CBAJ_T0011516.1 MGP_CBAJ_G0009654.1 mouse_genomes_project 6 54730857 54731000 + Gm27477 misc_RNA misc_RNA MGP_CBAJ_T0080643.1 MGP_CBAJ_G0031163.1 mouse_genomes_project 6 162353245 162365457 - MGP_CBAJ_P0080643 Pthlh protein_coding protein_coding MGP_CBAJ_T0080644.1 MGP_CBAJ_G0031163.1 mouse_genomes_project 6 162353253 162365473 - MGP_CBAJ_P0080644 Pthlh protein_coding protein_coding MGP_CBAJ_T0077261.1 MGP_CBAJ_G0030434.1 mouse_genomes_project 6 57811080 57877085 - MGP_CBAJ_P0077261 Nod1 protein_coding protein_coding MGP_CBAJ_T0077262.1 MGP_CBAJ_G0030434.1 mouse_genomes_project 6 57811080 57878036 - MGP_CBAJ_P0077262 Nod1 protein_coding protein_coding MGP_CBAJ_T0077263.1 MGP_CBAJ_G0030434.1 mouse_genomes_project 6 57811890 57815230 - Nod1 protein_coding processed_transcript MGP_CBAJ_T0077264.1 MGP_CBAJ_G0030434.1 mouse_genomes_project 6 57815220 57830619 - MGP_CBAJ_P0077264 Nod1 protein_coding protein_coding MGP_CBAJ_T0077265.1 MGP_CBAJ_G0030434.1 mouse_genomes_project 6 57824519 57827017 - Nod1 protein_coding processed_transcript MGP_CBAJ_T0077266.1 MGP_CBAJ_G0030434.1 mouse_genomes_project 6 57836637 57870220 - MGP_CBAJ_P0077266 Nod1 protein_coding protein_coding MGP_CBAJ_T0077293.1 MGP_CBAJ_G0030442.1 mouse_genomes_project 6 58379207 58425988 + MGP_CBAJ_P0077293 Adcyap1r1 protein_coding protein_coding MGP_CBAJ_T0077294.1 MGP_CBAJ_G0030442.1 mouse_genomes_project 6 58379257 58428528 + MGP_CBAJ_P0077294 Adcyap1r1 protein_coding protein_coding MGP_CBAJ_T0077295.1 MGP_CBAJ_G0030442.1 mouse_genomes_project 6 58379286 58405309 + MGP_CBAJ_P0077295 Adcyap1r1 protein_coding protein_coding MGP_CBAJ_T0077296.1 MGP_CBAJ_G0030442.1 mouse_genomes_project 6 58379406 58387456 + MGP_CBAJ_P0077296 Adcyap1r1 protein_coding protein_coding MGP_CBAJ_T0077297.1 MGP_CBAJ_G0030442.1 mouse_genomes_project 6 58387446 58424254 + MGP_CBAJ_P0077297 Adcyap1r1 protein_coding protein_coding MGP_CBAJ_T0077298.1 MGP_CBAJ_G0030442.1 mouse_genomes_project 6 58387446 58424254 + MGP_CBAJ_P0077298 Adcyap1r1 protein_coding protein_coding MGP_CBAJ_T0077299.1 MGP_CBAJ_G0030442.1 mouse_genomes_project 6 58387446 58424254 + MGP_CBAJ_P0077299 Adcyap1r1 protein_coding protein_coding MGP_CBAJ_T0077300.1 MGP_CBAJ_G0030442.1 mouse_genomes_project 6 58387446 58424511 + MGP_CBAJ_P0077300 Adcyap1r1 protein_coding protein_coding MGP_CBAJ_T0080483.1 MGP_CBAJ_G0031137.1 mouse_genomes_project 6 157838040 157894144 + MGP_CBAJ_P0080483 Etnk1 protein_coding protein_coding MGP_CBAJ_T0080484.1 MGP_CBAJ_G0031137.1 mouse_genomes_project 6 157838049 157883751 + MGP_CBAJ_P0080484 Etnk1 protein_coding protein_coding MGP_CBAJ_T0080485.1 MGP_CBAJ_G0031137.1 mouse_genomes_project 6 157838073 157866217 + Etnk1 protein_coding retained_intron MGP_CBAJ_T0080486.1 MGP_CBAJ_G0031137.1 mouse_genomes_project 6 157838073 157907945 + MGP_CBAJ_P0080486 Etnk1 protein_coding protein_coding MGP_CBAJ_T0000178.1 MGP_CBAJ_G0000134.1 mouse_genomes_project 6 74285073 74285610 - MGP_CBAJ_P0000178 Igkv4-53 IG_V_gene IG_V_gene MGP_CBAJ_T0000179.1 MGP_CBAJ_G0000134.1 mouse_genomes_project 6 74285073 74285361 - MGP_CBAJ_P0000179 Igkv4-53 IG_V_gene IG_V_gene MGP_CBAJ_T0076857.1 MGP_CBAJ_G0030341.1 mouse_genomes_project 6 44436473 44437473 + MGP_CBAJ_P0076857 protein_coding protein_coding MGP_CBAJ_T0015039.1 MGP_CBAJ_G0013151.1 mouse_genomes_project 6 15051803 15053499 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002106.1 MGP_CBAJ_G0002021.1 mouse_genomes_project 6 139582327 139584644 + TEC TEC MGP_CBAJ_T0015318.1 MGP_CBAJ_G0013430.1 mouse_genomes_project 6 123130952 123131123 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015344.1 MGP_CBAJ_G0013456.1 mouse_genomes_project 6 131674645 131674982 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002078.1 MGP_CBAJ_G0001994.1 mouse_genomes_project 6 118029929 118032156 - TEC TEC MGP_CBAJ_T0077349.1 MGP_CBAJ_G0030456.1 mouse_genomes_project 6 60168359 60169556 + MGP_CBAJ_P0077349 protein_coding protein_coding MGP_CBAJ_T0015238.1 MGP_CBAJ_G0013350.1 mouse_genomes_project 6 88852406 88853078 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015046.1 MGP_CBAJ_G0013158.1 mouse_genomes_project 6 17538730 17540039 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100711.1 MGP_CBAJ_G0038966.1 mouse_genomes_project 6 148602846 148602980 + Gm22881 snoRNA snoRNA MGP_CBAJ_T0015096.1 MGP_CBAJ_G0013208.1 mouse_genomes_project 6 44758143 44759891 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0077167.1 MGP_CBAJ_G0030415.1 mouse_genomes_project 6 54799742 54804012 - MGP_CBAJ_P0077167 Hoxa9 protein_coding protein_coding MGP_CBAJ_T0077168.1 MGP_CBAJ_G0030415.1 mouse_genomes_project 6 54800605 54809576 - Hoxa9 protein_coding processed_transcript MGP_CBAJ_T0077169.1 MGP_CBAJ_G0030415.1 mouse_genomes_project 6 54800763 54802831 - MGP_CBAJ_P0077169 Hoxa9 protein_coding protein_coding MGP_CBAJ_T0077170.1 MGP_CBAJ_G0030415.1 mouse_genomes_project 6 54800965 54806921 - Hoxa9 protein_coding processed_transcript MGP_CBAJ_T0077171.1 MGP_CBAJ_G0030415.1 mouse_genomes_project 6 54804888 54809020 - Hoxa9 protein_coding retained_intron MGP_CBAJ_T0010696.1 MGP_CBAJ_G0008834.1 mouse_genomes_project 6 150540300 150540441 - Gm44364 miRNA miRNA MGP_CBAJ_T0015042.1 MGP_CBAJ_G0013154.1 mouse_genomes_project 6 16440785 16441792 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0078526.1 MGP_CBAJ_G0030715.1 mouse_genomes_project 6 99086508 99093198 + MGP_CBAJ_P0078526 Lsm3 protein_coding protein_coding MGP_CBAJ_T0078527.1 MGP_CBAJ_G0030715.1 mouse_genomes_project 6 99086537 99090410 + Lsm3 protein_coding retained_intron MGP_CBAJ_T0078528.1 MGP_CBAJ_G0030715.1 mouse_genomes_project 6 99086557 99088587 + Lsm3 protein_coding retained_intron MGP_CBAJ_T0078529.1 MGP_CBAJ_G0030715.1 mouse_genomes_project 6 99086627 99088098 + Lsm3 protein_coding retained_intron MGP_CBAJ_T0078530.1 MGP_CBAJ_G0030715.1 mouse_genomes_project 6 99086628 99093193 + MGP_CBAJ_P0078530 Lsm3 protein_coding protein_coding MGP_CBAJ_T0100692.1 MGP_CBAJ_G0038947.1 mouse_genomes_project 6 106063222 106063365 + Gm23703 snoRNA snoRNA MGP_CBAJ_T0077464.1 MGP_CBAJ_G0030496.1 mouse_genomes_project 6 69533149 69610419 + MGP_CBAJ_P0077464 C130060K24Rik protein_coding protein_coding MGP_CBAJ_T0077465.1 MGP_CBAJ_G0030496.1 mouse_genomes_project 6 69533338 69615604 + MGP_CBAJ_P0077465 C130060K24Rik protein_coding protein_coding MGP_CBAJ_T0077466.1 MGP_CBAJ_G0030496.1 mouse_genomes_project 6 69597179 69610447 + MGP_CBAJ_P0077466 C130060K24Rik protein_coding protein_coding MGP_CBAJ_T0076566.1 MGP_CBAJ_G0030252.1 mouse_genomes_project 6 38471281 38556131 + Trim24 protein_coding retained_intron MGP_CBAJ_T0076567.1 MGP_CBAJ_G0030252.1 mouse_genomes_project 6 38471281 38526927 + Trim24 protein_coding retained_intron MGP_CBAJ_T0076568.1 MGP_CBAJ_G0030252.1 mouse_genomes_project 6 38471281 38580123 + MGP_CBAJ_P0076568 Trim24 protein_coding protein_coding MGP_CBAJ_T0076569.1 MGP_CBAJ_G0030252.1 mouse_genomes_project 6 38471281 38580123 + MGP_CBAJ_P0076569 Trim24 protein_coding protein_coding MGP_CBAJ_T0076570.1 MGP_CBAJ_G0030252.1 mouse_genomes_project 6 38478683 38538762 + Trim24 protein_coding processed_transcript MGP_CBAJ_T0076571.1 MGP_CBAJ_G0030252.1 mouse_genomes_project 6 38506082 38579759 + MGP_CBAJ_P0076571 Trim24 protein_coding protein_coding MGP_CBAJ_T0076572.1 MGP_CBAJ_G0030252.1 mouse_genomes_project 6 38520817 38534374 + Trim24 protein_coding retained_intron MGP_CBAJ_T0076573.1 MGP_CBAJ_G0030252.1 mouse_genomes_project 6 38557890 38562965 + Trim24 protein_coding retained_intron MGP_CBAJ_T0008448.1 MGP_CBAJ_G0006827.1 mouse_genomes_project 6 31641292 31652125 - lincRNA lincRNA MGP_CBAJ_T0099454.1 MGP_CBAJ_G0037709.1 mouse_genomes_project 6 123233850 123233956 + Gm22591 snRNA snRNA MGP_CBAJ_T0080461.1 MGP_CBAJ_G0031134.1 mouse_genomes_project 6 157407800 157430978 - MGP_CBAJ_P0080461 Sult6b2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080462.1 MGP_CBAJ_G0031134.1 mouse_genomes_project 6 157408377 157430942 - MGP_CBAJ_P0080462 Sult6b2 protein_coding protein_coding MGP_CBAJ_T0015170.1 MGP_CBAJ_G0013282.1 mouse_genomes_project 6 69571516 69573119 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005044.1 MGP_CBAJ_G0004300.1 mouse_genomes_project 6 160359423 160361664 + Gm15499 antisense antisense MGP_CBAJ_T0002668.1 MGP_CBAJ_G0002548.1 mouse_genomes_project 6 42230297 42230782 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0078498.1 MGP_CBAJ_G0030709.1 mouse_genomes_project 6 98688987 98706833 + MGP_CBAJ_P0078498 Hdac11 protein_coding protein_coding MGP_CBAJ_T0078499.1 MGP_CBAJ_G0030709.1 mouse_genomes_project 6 98689055 98691955 + Hdac11 protein_coding retained_intron MGP_CBAJ_T0078500.1 MGP_CBAJ_G0030709.1 mouse_genomes_project 6 98689063 98698681 + MGP_CBAJ_P0078500 Hdac11 protein_coding protein_coding MGP_CBAJ_T0078501.1 MGP_CBAJ_G0030709.1 mouse_genomes_project 6 98689401 98700007 + Hdac11 protein_coding retained_intron MGP_CBAJ_T0078502.1 MGP_CBAJ_G0030709.1 mouse_genomes_project 6 98697809 98701608 + MGP_CBAJ_P0078502 Hdac11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078503.1 MGP_CBAJ_G0030709.1 mouse_genomes_project 6 98703912 98705432 + Hdac11 protein_coding retained_intron MGP_CBAJ_T0004829.1 MGP_CBAJ_G0004142.1 mouse_genomes_project 6 16081230 16081831 - Gm26738 antisense antisense MGP_CBAJ_T0079314.1 MGP_CBAJ_G0030860.1 mouse_genomes_project 6 130871819 130886097 + Rad52 protein_coding processed_transcript MGP_CBAJ_T0079315.1 MGP_CBAJ_G0030860.1 mouse_genomes_project 6 130871824 130897309 + MGP_CBAJ_P0079315 Rad52 protein_coding protein_coding MGP_CBAJ_T0079316.1 MGP_CBAJ_G0030860.1 mouse_genomes_project 6 130871824 130897314 + MGP_CBAJ_P0079316 Rad52 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079317.1 MGP_CBAJ_G0030860.1 mouse_genomes_project 6 130871826 130884486 + Rad52 protein_coding retained_intron MGP_CBAJ_T0079318.1 MGP_CBAJ_G0030860.1 mouse_genomes_project 6 130871826 130883859 + Rad52 protein_coding processed_transcript MGP_CBAJ_T0079319.1 MGP_CBAJ_G0030860.1 mouse_genomes_project 6 130871849 130891928 + Rad52 protein_coding retained_intron MGP_CBAJ_T0079320.1 MGP_CBAJ_G0030860.1 mouse_genomes_project 6 130871855 130889781 + Rad52 protein_coding processed_transcript MGP_CBAJ_T0079321.1 MGP_CBAJ_G0030860.1 mouse_genomes_project 6 130871855 130889781 + Rad52 protein_coding processed_transcript MGP_CBAJ_T0079322.1 MGP_CBAJ_G0030860.1 mouse_genomes_project 6 130871860 130891426 + Rad52 protein_coding retained_intron MGP_CBAJ_T0079323.1 MGP_CBAJ_G0030860.1 mouse_genomes_project 6 130871897 130897309 + MGP_CBAJ_P0079323 Rad52 protein_coding protein_coding MGP_CBAJ_T0079324.1 MGP_CBAJ_G0030860.1 mouse_genomes_project 6 130883999 130884980 + Rad52 protein_coding retained_intron MGP_CBAJ_T0079325.1 MGP_CBAJ_G0030860.1 mouse_genomes_project 6 130884712 130889399 + Rad52 protein_coding retained_intron MGP_CBAJ_T0079326.1 MGP_CBAJ_G0030860.1 mouse_genomes_project 6 130886013 130889544 + Rad52 protein_coding retained_intron MGP_CBAJ_T0079327.1 MGP_CBAJ_G0030860.1 mouse_genomes_project 6 130888694 130892202 + Rad52 protein_coding retained_intron MGP_CBAJ_T0008568.1 MGP_CBAJ_G0006915.1 mouse_genomes_project 6 97963922 97965143 + Gm44421 lincRNA lincRNA MGP_CBAJ_T0008629.1 MGP_CBAJ_G0006968.1 mouse_genomes_project 6 140899887 140902281 - Gm44009 lincRNA lincRNA MGP_CBAJ_T0080401.1 MGP_CBAJ_G0031119.1 mouse_genomes_project 6 156310266 156370623 - MGP_CBAJ_P0080401 Slco1a4 protein_coding protein_coding MGP_CBAJ_T0080402.1 MGP_CBAJ_G0031119.1 mouse_genomes_project 6 156311548 156359922 - MGP_CBAJ_P0080402 Slco1a4 protein_coding protein_coding MGP_CBAJ_T0080403.1 MGP_CBAJ_G0031119.1 mouse_genomes_project 6 156346920 156370651 - MGP_CBAJ_P0080403 Slco1a4 protein_coding protein_coding MGP_CBAJ_T0080404.1 MGP_CBAJ_G0031119.1 mouse_genomes_project 6 156365458 156368134 - Slco1a4 protein_coding retained_intron MGP_CBAJ_T0011540.1 MGP_CBAJ_G0009678.1 mouse_genomes_project 6 126182607 126182857 - Gm27853 misc_RNA misc_RNA MGP_CBAJ_T0102029.1 MGP_CBAJ_G0040059.1 mouse_genomes_project 6 142336973 142344623 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0008438.1 MGP_CBAJ_G0006821.1 mouse_genomes_project 6 31277791 31310080 - Mkln1os lincRNA lincRNA MGP_CBAJ_T0008440.1 MGP_CBAJ_G0006821.1 mouse_genomes_project 6 31294397 31310060 - Mkln1os lincRNA lincRNA MGP_CBAJ_T0008441.1 MGP_CBAJ_G0006821.1 mouse_genomes_project 6 31296041 31310066 - Mkln1os lincRNA lincRNA MGP_CBAJ_T0080300.1 MGP_CBAJ_G0031101.1 mouse_genomes_project 6 151697432 151717831 + MGP_CBAJ_P0080300 Strap protein_coding protein_coding MGP_CBAJ_T0080301.1 MGP_CBAJ_G0031101.1 mouse_genomes_project 6 151707797 151714652 + Strap protein_coding processed_transcript MGP_CBAJ_T0080302.1 MGP_CBAJ_G0031101.1 mouse_genomes_project 6 151715123 151716575 + Strap protein_coding retained_intron MGP_CBAJ_T0080414.1 MGP_CBAJ_G0031123.1 mouse_genomes_project 6 156776809 156826556 - MGP_CBAJ_P0080414 Slco1a5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080415.1 MGP_CBAJ_G0031123.1 mouse_genomes_project 6 156776809 156887984 - MGP_CBAJ_P0080415 Slco1a5 protein_coding protein_coding MGP_CBAJ_T0080416.1 MGP_CBAJ_G0031123.1 mouse_genomes_project 6 156776809 156830641 - MGP_CBAJ_P0080416 Slco1a5 protein_coding protein_coding MGP_CBAJ_T0080417.1 MGP_CBAJ_G0031123.1 mouse_genomes_project 6 156792503 156830641 - Slco1a5 protein_coding retained_intron MGP_CBAJ_T0080418.1 MGP_CBAJ_G0031123.1 mouse_genomes_project 6 156801435 156887951 - MGP_CBAJ_P0080418 Slco1a5 protein_coding protein_coding MGP_CBAJ_T0008620.1 MGP_CBAJ_G0006959.1 mouse_genomes_project 6 136091996 136094640 + lincRNA lincRNA MGP_CBAJ_T0077541.1 MGP_CBAJ_G0030518.1 mouse_genomes_project 6 76122822 76128663 - MGP_CBAJ_P0077541 Tex37 protein_coding protein_coding MGP_CBAJ_T0075804.1 MGP_CBAJ_G0030107.1 mouse_genomes_project 6 2161909 2194232 - MGP_CBAJ_P0075804 Pon3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075805.1 MGP_CBAJ_G0030107.1 mouse_genomes_project 6 2161909 2194285 - MGP_CBAJ_P0075805 Pon3 protein_coding protein_coding MGP_CBAJ_T0075806.1 MGP_CBAJ_G0030107.1 mouse_genomes_project 6 2168822 2194234 - MGP_CBAJ_P0075806 Pon3 protein_coding protein_coding MGP_CBAJ_T0075807.1 MGP_CBAJ_G0030107.1 mouse_genomes_project 6 2172848 2194213 - Pon3 protein_coding retained_intron MGP_CBAJ_T0075808.1 MGP_CBAJ_G0030107.1 mouse_genomes_project 6 2173291 2192865 - Pon3 protein_coding retained_intron MGP_CBAJ_T0075809.1 MGP_CBAJ_G0030107.1 mouse_genomes_project 6 2192578 2193566 - Pon3 protein_coding processed_transcript MGP_CBAJ_T0015421.1 MGP_CBAJ_G0013533.1 mouse_genomes_project 6 150150520 150151535 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0076932.1 MGP_CBAJ_G0030360.1 mouse_genomes_project 6 50042906 50068550 - MGP_CBAJ_P0076932 Zfp746 protein_coding protein_coding MGP_CBAJ_T0076933.1 MGP_CBAJ_G0030360.1 mouse_genomes_project 6 50042906 50068550 - MGP_CBAJ_P0076933 Zfp746 protein_coding protein_coding MGP_CBAJ_T0076934.1 MGP_CBAJ_G0030360.1 mouse_genomes_project 6 50045262 50047872 - MGP_CBAJ_P0076934 Zfp746 protein_coding protein_coding MGP_CBAJ_T0076935.1 MGP_CBAJ_G0030360.1 mouse_genomes_project 6 50046722 50064235 - Zfp746 protein_coding retained_intron MGP_CBAJ_T0076936.1 MGP_CBAJ_G0030360.1 mouse_genomes_project 6 50063578 50067167 - Zfp746 protein_coding retained_intron MGP_CBAJ_T0076937.1 MGP_CBAJ_G0030360.1 mouse_genomes_project 6 50067192 50068503 - Zfp746 protein_coding retained_intron MGP_CBAJ_T0100657.1 MGP_CBAJ_G0038912.1 mouse_genomes_project 6 36347027 36347162 + Gm23273 snoRNA snoRNA MGP_CBAJ_T0015278.1 MGP_CBAJ_G0013390.1 mouse_genomes_project 6 103270127 103270478 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101353.1 MGP_CBAJ_G0039434.1 mouse_genomes_project 6 141493061 141499485 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101354.1 MGP_CBAJ_G0039434.1 mouse_genomes_project 6 141497539 141499477 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101994.1 MGP_CBAJ_G0040025.1 mouse_genomes_project 6 61394727 61394832 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0008511.1 MGP_CBAJ_G0006871.1 mouse_genomes_project 6 63620975 63686249 + lincRNA lincRNA MGP_CBAJ_T0008512.1 MGP_CBAJ_G0006871.1 mouse_genomes_project 6 63621017 63624998 + lincRNA lincRNA MGP_CBAJ_T0015409.1 MGP_CBAJ_G0013521.1 mouse_genomes_project 6 145855056 145855327 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100713.1 MGP_CBAJ_G0038968.1 mouse_genomes_project 6 158173527 158173656 - Gm23272 snoRNA snoRNA MGP_CBAJ_T0100687.1 MGP_CBAJ_G0038942.1 mouse_genomes_project 6 101105316 101105447 - Gm25094 snoRNA snoRNA MGP_CBAJ_T0001889.1 MGP_CBAJ_G0001805.1 mouse_genomes_project 6 15980969 15982348 - TEC TEC MGP_CBAJ_T0018014.1 MGP_CBAJ_G0015375.1 mouse_genomes_project 6 57060226 57242799 - 9130019P16Rik processed_transcript antisense MGP_CBAJ_T0018015.1 MGP_CBAJ_G0015375.1 mouse_genomes_project 6 57094539 57121668 - 9130019P16Rik processed_transcript lincRNA MGP_CBAJ_T0018016.1 MGP_CBAJ_G0015375.1 mouse_genomes_project 6 57237054 57242133 - 9130019P16Rik processed_transcript lincRNA MGP_CBAJ_T0100655.1 MGP_CBAJ_G0038910.1 mouse_genomes_project 6 27049495 27049612 + Gm26310 snoRNA snoRNA MGP_CBAJ_T0078722.1 MGP_CBAJ_G0030753.1 mouse_genomes_project 6 109381996 109493250 + MGP_CBAJ_P0078722 Gxylt2 protein_coding protein_coding MGP_CBAJ_T0078723.1 MGP_CBAJ_G0030753.1 mouse_genomes_project 6 109382017 109384937 + Gxylt2 protein_coding processed_transcript MGP_CBAJ_T0076218.1 MGP_CBAJ_G0030194.1 mouse_genomes_project 6 28963454 28993079 + MGP_CBAJ_P0076218 Calu protein_coding protein_coding MGP_CBAJ_T0076219.1 MGP_CBAJ_G0030194.1 mouse_genomes_project 6 28963454 28993079 + MGP_CBAJ_P0076219 Calu protein_coding protein_coding MGP_CBAJ_T0076220.1 MGP_CBAJ_G0030194.1 mouse_genomes_project 6 28963491 28995251 + MGP_CBAJ_P0076220 Calu protein_coding protein_coding MGP_CBAJ_T0076221.1 MGP_CBAJ_G0030194.1 mouse_genomes_project 6 28963504 28994705 + MGP_CBAJ_P0076221 Calu protein_coding protein_coding MGP_CBAJ_T0076222.1 MGP_CBAJ_G0030194.1 mouse_genomes_project 6 28963513 28995252 + MGP_CBAJ_P0076222 Calu protein_coding protein_coding MGP_CBAJ_T0076223.1 MGP_CBAJ_G0030194.1 mouse_genomes_project 6 28971655 28993601 + MGP_CBAJ_P0076223 Calu protein_coding nonsense_mediated_decay MGP_CBAJ_T0076224.1 MGP_CBAJ_G0030194.1 mouse_genomes_project 6 28976646 28991918 + MGP_CBAJ_P0076224 Calu protein_coding protein_coding MGP_CBAJ_T0076225.1 MGP_CBAJ_G0030194.1 mouse_genomes_project 6 28991122 28995686 + MGP_CBAJ_P0076225 Calu protein_coding protein_coding MGP_CBAJ_T0076226.1 MGP_CBAJ_G0030194.1 mouse_genomes_project 6 28992231 28993607 + Calu protein_coding processed_transcript MGP_CBAJ_T0004994.1 MGP_CBAJ_G0004257.1 mouse_genomes_project 6 134282887 134291104 - Gm26826 antisense antisense MGP_CBAJ_T0076754.1 MGP_CBAJ_G0030302.1 mouse_genomes_project 6 42840305 42855333 + MGP_CBAJ_P0076754 Ephb6 protein_coding protein_coding MGP_CBAJ_T0076755.1 MGP_CBAJ_G0030302.1 mouse_genomes_project 6 42848121 42849435 + Ephb6 protein_coding processed_transcript MGP_CBAJ_T0076756.1 MGP_CBAJ_G0030302.1 mouse_genomes_project 6 42849515 42851581 + MGP_CBAJ_P0076756 Ephb6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076757.1 MGP_CBAJ_G0030302.1 mouse_genomes_project 6 42854766 42855331 + MGP_CBAJ_P0076757 Ephb6 protein_coding protein_coding MGP_CBAJ_T0008591.1 MGP_CBAJ_G0006932.1 mouse_genomes_project 6 110647988 110654844 + Gm44176 lincRNA lincRNA MGP_CBAJ_T0079158.1 MGP_CBAJ_G0030832.1 mouse_genomes_project 6 126838831 126924294 + MGP_CBAJ_P0079158 protein_coding protein_coding MGP_CBAJ_T0079159.1 MGP_CBAJ_G0030832.1 mouse_genomes_project 6 126838840 126924294 + MGP_CBAJ_P0079159 protein_coding protein_coding MGP_CBAJ_T0079160.1 MGP_CBAJ_G0030832.1 mouse_genomes_project 6 126838851 126920507 + MGP_CBAJ_P0079160 protein_coding protein_coding MGP_CBAJ_T0079161.1 MGP_CBAJ_G0030832.1 mouse_genomes_project 6 126838860 126920495 + MGP_CBAJ_P0079161 protein_coding protein_coding MGP_CBAJ_T0079162.1 MGP_CBAJ_G0030832.1 mouse_genomes_project 6 126838871 126892200 + MGP_CBAJ_P0079162 protein_coding protein_coding MGP_CBAJ_T0079163.1 MGP_CBAJ_G0030832.1 mouse_genomes_project 6 126839087 126924297 + MGP_CBAJ_P0079163 protein_coding protein_coding MGP_CBAJ_T0079164.1 MGP_CBAJ_G0030832.1 mouse_genomes_project 6 126861673 126864736 + protein_coding retained_intron MGP_CBAJ_T0079165.1 MGP_CBAJ_G0030832.1 mouse_genomes_project 6 126862163 126916200 + MGP_CBAJ_P0079165 protein_coding protein_coding MGP_CBAJ_T0079166.1 MGP_CBAJ_G0030832.1 mouse_genomes_project 6 126862204 126892261 + MGP_CBAJ_P0079166 protein_coding protein_coding MGP_CBAJ_T0079167.1 MGP_CBAJ_G0030832.1 mouse_genomes_project 6 126892090 126914206 + protein_coding retained_intron MGP_CBAJ_T0079168.1 MGP_CBAJ_G0030832.1 mouse_genomes_project 6 126901534 126920978 + MGP_CBAJ_P0079168 protein_coding protein_coding MGP_CBAJ_T0079169.1 MGP_CBAJ_G0030832.1 mouse_genomes_project 6 126901560 126920888 + protein_coding retained_intron MGP_CBAJ_T0079170.1 MGP_CBAJ_G0030832.1 mouse_genomes_project 6 126904692 126914632 + protein_coding processed_transcript MGP_CBAJ_T0079171.1 MGP_CBAJ_G0030832.1 mouse_genomes_project 6 126915763 126920536 + protein_coding processed_transcript MGP_CBAJ_T0079172.1 MGP_CBAJ_G0030832.1 mouse_genomes_project 6 126919930 126921059 + protein_coding processed_transcript MGP_CBAJ_T0011534.1 MGP_CBAJ_G0009672.1 mouse_genomes_project 6 108078011 108078258 + Gm24936 misc_RNA misc_RNA MGP_CBAJ_T0004880.1 MGP_CBAJ_G0004181.1 mouse_genomes_project 6 56574663 56628920 + Gm43938 antisense antisense MGP_CBAJ_T0076595.1 MGP_CBAJ_G0030258.1 mouse_genomes_project 6 38953851 39025838 - MGP_CBAJ_P0076595 Zc3hav1 protein_coding protein_coding MGP_CBAJ_T0076596.1 MGP_CBAJ_G0030258.1 mouse_genomes_project 6 38962581 39025838 - MGP_CBAJ_P0076596 Zc3hav1 protein_coding protein_coding MGP_CBAJ_T0076597.1 MGP_CBAJ_G0030258.1 mouse_genomes_project 6 38967662 39026168 - MGP_CBAJ_P0076597 Zc3hav1 protein_coding protein_coding MGP_CBAJ_T0076598.1 MGP_CBAJ_G0030258.1 mouse_genomes_project 6 38967662 39026168 - MGP_CBAJ_P0076598 Zc3hav1 protein_coding protein_coding MGP_CBAJ_T0005037.1 MGP_CBAJ_G0004294.1 mouse_genomes_project 6 159504347 159527815 + Sox5os3 antisense antisense MGP_CBAJ_T0005038.1 MGP_CBAJ_G0004294.1 mouse_genomes_project 6 159511151 159527565 + Sox5os3 antisense antisense MGP_CBAJ_T0010690.1 MGP_CBAJ_G0008828.1 mouse_genomes_project 6 139928130 139928190 - Mir7233 miRNA miRNA MGP_CBAJ_T0000277.1 MGP_CBAJ_G0000222.1 mouse_genomes_project 6 73260685 73261144 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0077981.1 MGP_CBAJ_G0030608.1 mouse_genomes_project 6 90609690 90636290 - MGP_CBAJ_P0077981 Paip2b protein_coding protein_coding MGP_CBAJ_T0077982.1 MGP_CBAJ_G0030608.1 mouse_genomes_project 6 90611322 90612865 - Paip2b protein_coding retained_intron MGP_CBAJ_T0077983.1 MGP_CBAJ_G0030608.1 mouse_genomes_project 6 90612378 90636262 - Paip2b protein_coding retained_intron MGP_CBAJ_T0077984.1 MGP_CBAJ_G0030608.1 mouse_genomes_project 6 90615523 90636262 - Paip2b protein_coding retained_intron MGP_CBAJ_T0077985.1 MGP_CBAJ_G0030608.1 mouse_genomes_project 6 90636005 90636249 - Paip2b protein_coding retained_intron MGP_CBAJ_T0080340.1 MGP_CBAJ_G0031106.1 mouse_genomes_project 6 152787925 152789382 - MGP_CBAJ_P0080340 Igbp1b protein_coding protein_coding MGP_CBAJ_T0015400.1 MGP_CBAJ_G0013512.1 mouse_genomes_project 6 145051412 145051893 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0102044.1 MGP_CBAJ_G0040074.1 mouse_genomes_project 6 146467614 146469697 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0004904.1 MGP_CBAJ_G0004202.1 mouse_genomes_project 6 89808574 89811021 - Ccdc142os antisense antisense MGP_CBAJ_T0004905.1 MGP_CBAJ_G0004202.1 mouse_genomes_project 6 89808585 89811020 - Ccdc142os antisense antisense MGP_CBAJ_T0004906.1 MGP_CBAJ_G0004202.1 mouse_genomes_project 6 89808833 89810954 - Ccdc142os antisense antisense MGP_CBAJ_T0004907.1 MGP_CBAJ_G0004202.1 mouse_genomes_project 6 89809713 89811021 - Ccdc142os antisense antisense MGP_CBAJ_T0011510.1 MGP_CBAJ_G0009648.1 mouse_genomes_project 6 49571386 49571463 + Gm25283 misc_RNA misc_RNA MGP_CBAJ_T0077356.1 MGP_CBAJ_G0030463.1 mouse_genomes_project 6 60521671 60522654 - MGP_CBAJ_P0077356 Vmn1r16 protein_coding protein_coding MGP_CBAJ_T0002075.1 MGP_CBAJ_G0001991.1 mouse_genomes_project 6 112587624 112590095 + TEC TEC MGP_CBAJ_T0079521.1 MGP_CBAJ_G0030895.1 mouse_genomes_project 6 134329555 134338589 - MGP_CBAJ_P0079521 C3ar1 protein_coding protein_coding MGP_CBAJ_T0004891.1 MGP_CBAJ_G0004192.1 mouse_genomes_project 6 76875781 76876705 - 1700040L08Rik antisense antisense MGP_CBAJ_T0018023.1 MGP_CBAJ_G0015378.1 mouse_genomes_project 6 67205073 67209560 - processed_transcript retained_intron MGP_CBAJ_T0079498.1 MGP_CBAJ_G0030890.1 mouse_genomes_project 6 134005151 134033501 - MGP_CBAJ_P0079498 Apobec1 protein_coding protein_coding MGP_CBAJ_T0079499.1 MGP_CBAJ_G0030890.1 mouse_genomes_project 6 134005158 134031182 - MGP_CBAJ_P0079499 Apobec1 protein_coding protein_coding MGP_CBAJ_T0079500.1 MGP_CBAJ_G0030890.1 mouse_genomes_project 6 134005160 134033428 - MGP_CBAJ_P0079500 Apobec1 protein_coding protein_coding MGP_CBAJ_T0079501.1 MGP_CBAJ_G0030890.1 mouse_genomes_project 6 134008657 134033444 - MGP_CBAJ_P0079501 Apobec1 protein_coding protein_coding MGP_CBAJ_T0079502.1 MGP_CBAJ_G0030890.1 mouse_genomes_project 6 134008683 134031413 - MGP_CBAJ_P0079502 Apobec1 protein_coding protein_coding MGP_CBAJ_T0079503.1 MGP_CBAJ_G0030890.1 mouse_genomes_project 6 134008865 134033386 - MGP_CBAJ_P0079503 Apobec1 protein_coding protein_coding MGP_CBAJ_T0079504.1 MGP_CBAJ_G0030890.1 mouse_genomes_project 6 134018378 134033427 - MGP_CBAJ_P0079504 Apobec1 protein_coding protein_coding MGP_CBAJ_T0079505.1 MGP_CBAJ_G0030890.1 mouse_genomes_project 6 134019111 134033421 - Apobec1 protein_coding retained_intron MGP_CBAJ_T0079506.1 MGP_CBAJ_G0030890.1 mouse_genomes_project 6 134027679 134031493 - Apobec1 protein_coding retained_intron MGP_CBAJ_T0102011.1 MGP_CBAJ_G0040042.1 mouse_genomes_project 6 97098643 97099442 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0078314.1 MGP_CBAJ_G0030669.1 mouse_genomes_project 6 95424804 95451256 + MGP_CBAJ_P0078314 Rpn1 protein_coding protein_coding MGP_CBAJ_T0078315.1 MGP_CBAJ_G0030669.1 mouse_genomes_project 6 95424885 95439416 + MGP_CBAJ_P0078315 Rpn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078316.1 MGP_CBAJ_G0030669.1 mouse_genomes_project 6 95437670 95447057 + Rpn1 protein_coding retained_intron MGP_CBAJ_T0078317.1 MGP_CBAJ_G0030669.1 mouse_genomes_project 6 95445238 95447314 + Rpn1 protein_coding retained_intron MGP_CBAJ_T0078318.1 MGP_CBAJ_G0030669.1 mouse_genomes_project 6 95447522 95449339 + Rpn1 protein_coding retained_intron MGP_CBAJ_T0080130.1 MGP_CBAJ_G0031063.1 mouse_genomes_project 6 146742209 146745791 + MGP_CBAJ_P0080130 5530400C23Rik protein_coding protein_coding MGP_CBAJ_T0080247.1 MGP_CBAJ_G0031090.1 mouse_genomes_project 6 150545408 150560560 - MGP_CBAJ_P0080247 Wbp11 protein_coding protein_coding MGP_CBAJ_T0080248.1 MGP_CBAJ_G0031090.1 mouse_genomes_project 6 150548653 150553563 - MGP_CBAJ_P0080248 Wbp11 protein_coding protein_coding MGP_CBAJ_T0080249.1 MGP_CBAJ_G0031090.1 mouse_genomes_project 6 150548878 150560463 - MGP_CBAJ_P0080249 Wbp11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080250.1 MGP_CBAJ_G0031090.1 mouse_genomes_project 6 150552085 150560470 - Wbp11 protein_coding retained_intron MGP_CBAJ_T0080251.1 MGP_CBAJ_G0031090.1 mouse_genomes_project 6 150556875 150560462 - Wbp11 protein_coding retained_intron MGP_CBAJ_T0080252.1 MGP_CBAJ_G0031090.1 mouse_genomes_project 6 150557625 150558613 - Wbp11 protein_coding retained_intron MGP_CBAJ_T0080253.1 MGP_CBAJ_G0031090.1 mouse_genomes_project 6 150558033 150560063 - MGP_CBAJ_P0080253 Wbp11 protein_coding protein_coding MGP_CBAJ_T0008616.1 MGP_CBAJ_G0006955.1 mouse_genomes_project 6 132430677 132450493 - Gm44148 lincRNA lincRNA MGP_CBAJ_T0010635.1 MGP_CBAJ_G0008773.1 mouse_genomes_project 6 35846711 35846807 - Gm23053 miRNA miRNA MGP_CBAJ_T0102035.1 MGP_CBAJ_G0040065.1 mouse_genomes_project 6 145840239 145840604 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0078055.1 MGP_CBAJ_G0030619.1 mouse_genomes_project 6 92472212 92486638 + MGP_CBAJ_P0078055 Smyd5 protein_coding protein_coding MGP_CBAJ_T0078056.1 MGP_CBAJ_G0030619.1 mouse_genomes_project 6 92472225 92480569 + Smyd5 protein_coding retained_intron MGP_CBAJ_T0078057.1 MGP_CBAJ_G0030619.1 mouse_genomes_project 6 92472296 92473042 + Smyd5 protein_coding retained_intron MGP_CBAJ_T0078058.1 MGP_CBAJ_G0030619.1 mouse_genomes_project 6 92479370 92482182 + Smyd5 protein_coding retained_intron MGP_CBAJ_T0078059.1 MGP_CBAJ_G0030619.1 mouse_genomes_project 6 92481856 92485646 + Smyd5 protein_coding retained_intron MGP_CBAJ_T0078060.1 MGP_CBAJ_G0030619.1 mouse_genomes_project 6 92481951 92485163 + Smyd5 protein_coding processed_transcript MGP_CBAJ_T0078061.1 MGP_CBAJ_G0030619.1 mouse_genomes_project 6 92481966 92485400 + Smyd5 protein_coding retained_intron MGP_CBAJ_T0078062.1 MGP_CBAJ_G0030619.1 mouse_genomes_project 6 92482799 92485635 + Smyd5 protein_coding processed_transcript MGP_CBAJ_T0080448.1 MGP_CBAJ_G0031131.1 mouse_genomes_project 6 157152376 157159154 - MGP_CBAJ_P0080448 Kcnj8 protein_coding protein_coding MGP_CBAJ_T0080449.1 MGP_CBAJ_G0031131.1 mouse_genomes_project 6 157152378 157158911 - MGP_CBAJ_P0080449 Kcnj8 protein_coding protein_coding MGP_CBAJ_T0017965.1 MGP_CBAJ_G0015364.1 mouse_genomes_project 6 44396 55836 - processed_transcript lincRNA MGP_CBAJ_T0017966.1 MGP_CBAJ_G0015364.1 mouse_genomes_project 6 46772 55875 - processed_transcript lincRNA MGP_CBAJ_T0017967.1 MGP_CBAJ_G0015364.1 mouse_genomes_project 6 47093 55907 - processed_transcript retained_intron MGP_CBAJ_T0017968.1 MGP_CBAJ_G0015364.1 mouse_genomes_project 6 49507 55876 - processed_transcript retained_intron MGP_CBAJ_T0076671.1 MGP_CBAJ_G0030272.1 mouse_genomes_project 6 40322564 40446698 - MGP_CBAJ_P0076671 Dennd2a protein_coding protein_coding MGP_CBAJ_T0076672.1 MGP_CBAJ_G0030272.1 mouse_genomes_project 6 40323439 40355126 - Dennd2a protein_coding retained_intron MGP_CBAJ_T0076673.1 MGP_CBAJ_G0030272.1 mouse_genomes_project 6 40334899 40337020 - Dennd2a protein_coding retained_intron MGP_CBAJ_T0076674.1 MGP_CBAJ_G0030272.1 mouse_genomes_project 6 40350538 40352416 - Dennd2a protein_coding retained_intron MGP_CBAJ_T0076675.1 MGP_CBAJ_G0030272.1 mouse_genomes_project 6 40365653 40446698 - MGP_CBAJ_P0076675 Dennd2a protein_coding protein_coding MGP_CBAJ_T0015219.1 MGP_CBAJ_G0013331.1 mouse_genomes_project 6 77539823 77540319 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0078307.1 MGP_CBAJ_G0030667.1 mouse_genomes_project 6 95291755 95292972 - MGP_CBAJ_P0078307 H1fx protein_coding protein_coding MGP_CBAJ_T0078627.1 MGP_CBAJ_G0030735.1 mouse_genomes_project 6 104181050 104777082 + MGP_CBAJ_P0078627 Fam19a1 protein_coding protein_coding MGP_CBAJ_T0078628.1 MGP_CBAJ_G0030735.1 mouse_genomes_project 6 104181138 104202157 + Fam19a1 protein_coding processed_transcript MGP_CBAJ_T0078629.1 MGP_CBAJ_G0030735.1 mouse_genomes_project 6 104182553 104183822 + Fam19a1 protein_coding processed_transcript MGP_CBAJ_T0078630.1 MGP_CBAJ_G0030735.1 mouse_genomes_project 6 104183215 104776351 + MGP_CBAJ_P0078630 Fam19a1 protein_coding protein_coding MGP_CBAJ_T0015052.1 MGP_CBAJ_G0013164.1 mouse_genomes_project 6 20163263 20163483 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0078513.1 MGP_CBAJ_G0030711.1 mouse_genomes_project 6 98907382 98961110 - MGP_CBAJ_P0078513 Wnt7a protein_coding protein_coding MGP_CBAJ_T0078514.1 MGP_CBAJ_G0030711.1 mouse_genomes_project 6 98907384 98908499 - Wnt7a protein_coding processed_transcript MGP_CBAJ_T0078515.1 MGP_CBAJ_G0030711.1 mouse_genomes_project 6 98907386 98908473 - Wnt7a protein_coding processed_transcript MGP_CBAJ_T0075890.1 MGP_CBAJ_G0030127.1 mouse_genomes_project 6 6211797 6215797 + Nxph1 protein_coding processed_transcript MGP_CBAJ_T0075891.1 MGP_CBAJ_G0030127.1 mouse_genomes_project 6 6211980 6514501 + MGP_CBAJ_P0075891 Nxph1 protein_coding protein_coding MGP_CBAJ_T0075892.1 MGP_CBAJ_G0030127.1 mouse_genomes_project 6 6213042 6514499 + MGP_CBAJ_P0075892 Nxph1 protein_coding protein_coding MGP_CBAJ_T0002035.1 MGP_CBAJ_G0001951.1 mouse_genomes_project 6 96157962 96161309 - TEC TEC MGP_CBAJ_T0000189.1 MGP_CBAJ_G0000142.1 mouse_genomes_project 6 74976399 74976912 - MGP_CBAJ_P0000189 Igkv18-36 IG_V_gene IG_V_gene MGP_CBAJ_T0000190.1 MGP_CBAJ_G0000142.1 mouse_genomes_project 6 74976399 74976912 - MGP_CBAJ_P0000190 Igkv18-36 IG_V_gene IG_V_gene MGP_CBAJ_T0077185.1 MGP_CBAJ_G0030420.1 mouse_genomes_project 6 55182954 55286027 - MGP_CBAJ_P0077185 Hibadh protein_coding protein_coding MGP_CBAJ_T0077186.1 MGP_CBAJ_G0030420.1 mouse_genomes_project 6 55183422 55270315 - Hibadh protein_coding retained_intron MGP_CBAJ_T0077187.1 MGP_CBAJ_G0030420.1 mouse_genomes_project 6 55185577 55196218 - Hibadh protein_coding retained_intron MGP_CBAJ_T0077188.1 MGP_CBAJ_G0030420.1 mouse_genomes_project 6 55193716 55195820 - Hibadh protein_coding retained_intron MGP_CBAJ_T0077189.1 MGP_CBAJ_G0030420.1 mouse_genomes_project 6 55276387 55285953 - Hibadh protein_coding retained_intron MGP_CBAJ_T0101329.1 MGP_CBAJ_G0039425.1 mouse_genomes_project 6 44373520 44413144 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0008529.1 MGP_CBAJ_G0006887.1 mouse_genomes_project 6 78575341 78579347 + Gm26640 lincRNA lincRNA MGP_CBAJ_T0015079.1 MGP_CBAJ_G0013191.1 mouse_genomes_project 6 38932891 38933315 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002008.1 MGP_CBAJ_G0001924.1 mouse_genomes_project 6 92795908 92799245 + TEC TEC MGP_CBAJ_T0080167.1 MGP_CBAJ_G0031072.1 mouse_genomes_project 6 148275312 148304502 - MGP_CBAJ_P0080167 Gpr19 protein_coding protein_coding MGP_CBAJ_T0080168.1 MGP_CBAJ_G0031072.1 mouse_genomes_project 6 148275312 148304392 - MGP_CBAJ_P0080168 Gpr19 protein_coding protein_coding MGP_CBAJ_T0080169.1 MGP_CBAJ_G0031072.1 mouse_genomes_project 6 148275327 148304435 - MGP_CBAJ_P0080169 Gpr19 protein_coding protein_coding MGP_CBAJ_T0080170.1 MGP_CBAJ_G0031072.1 mouse_genomes_project 6 148275376 148294272 - MGP_CBAJ_P0080170 Gpr19 protein_coding protein_coding MGP_CBAJ_T0080171.1 MGP_CBAJ_G0031072.1 mouse_genomes_project 6 148275381 148304440 - MGP_CBAJ_P0080171 Gpr19 protein_coding protein_coding MGP_CBAJ_T0080172.1 MGP_CBAJ_G0031072.1 mouse_genomes_project 6 148276256 148304402 - MGP_CBAJ_P0080172 Gpr19 protein_coding protein_coding MGP_CBAJ_T0080173.1 MGP_CBAJ_G0031072.1 mouse_genomes_project 6 148276427 148304392 - MGP_CBAJ_P0080173 Gpr19 protein_coding protein_coding MGP_CBAJ_T0080174.1 MGP_CBAJ_G0031072.1 mouse_genomes_project 6 148276468 148294208 - MGP_CBAJ_P0080174 Gpr19 protein_coding protein_coding MGP_CBAJ_T0080175.1 MGP_CBAJ_G0031072.1 mouse_genomes_project 6 148283462 148304464 - Gpr19 protein_coding processed_transcript MGP_CBAJ_T0080176.1 MGP_CBAJ_G0031072.1 mouse_genomes_project 6 148293330 148303664 - Gpr19 protein_coding processed_transcript MGP_CBAJ_T0080177.1 MGP_CBAJ_G0031072.1 mouse_genomes_project 6 148294090 148305141 - Gpr19 protein_coding processed_transcript MGP_CBAJ_T0080178.1 MGP_CBAJ_G0031072.1 mouse_genomes_project 6 148303277 148304502 - Gpr19 protein_coding processed_transcript MGP_CBAJ_T0008530.1 MGP_CBAJ_G0006888.1 mouse_genomes_project 6 79093003 79114947 - lincRNA lincRNA MGP_CBAJ_T0080151.1 MGP_CBAJ_G0031069.1 mouse_genomes_project 6 148015235 148094945 + MGP_CBAJ_P0080151 Borcs5 protein_coding protein_coding MGP_CBAJ_T0080152.1 MGP_CBAJ_G0031069.1 mouse_genomes_project 6 148016701 148095762 + MGP_CBAJ_P0080152 Borcs5 protein_coding protein_coding MGP_CBAJ_T0080153.1 MGP_CBAJ_G0031069.1 mouse_genomes_project 6 148016722 148020453 + Borcs5 protein_coding retained_intron MGP_CBAJ_T0080154.1 MGP_CBAJ_G0031069.1 mouse_genomes_project 6 148017016 148064373 + Borcs5 protein_coding retained_intron MGP_CBAJ_T0080155.1 MGP_CBAJ_G0031069.1 mouse_genomes_project 6 148081158 148095045 + Borcs5 protein_coding processed_transcript MGP_CBAJ_T0078487.1 MGP_CBAJ_G0030708.1 mouse_genomes_project 6 98531909 98646459 - MGP_CBAJ_P0078487 Nup210 protein_coding protein_coding MGP_CBAJ_T0078488.1 MGP_CBAJ_G0030708.1 mouse_genomes_project 6 98531911 98646449 - MGP_CBAJ_P0078488 Nup210 protein_coding protein_coding MGP_CBAJ_T0078489.1 MGP_CBAJ_G0030708.1 mouse_genomes_project 6 98531911 98579227 - MGP_CBAJ_P0078489 Nup210 protein_coding protein_coding MGP_CBAJ_T0078490.1 MGP_CBAJ_G0030708.1 mouse_genomes_project 6 98532158 98536259 - Nup210 protein_coding processed_transcript MGP_CBAJ_T0078491.1 MGP_CBAJ_G0030708.1 mouse_genomes_project 6 98537574 98546751 - Nup210 protein_coding retained_intron MGP_CBAJ_T0078492.1 MGP_CBAJ_G0030708.1 mouse_genomes_project 6 98537753 98545294 - Nup210 protein_coding processed_transcript MGP_CBAJ_T0078493.1 MGP_CBAJ_G0030708.1 mouse_genomes_project 6 98547821 98551500 - Nup210 protein_coding retained_intron MGP_CBAJ_T0078494.1 MGP_CBAJ_G0030708.1 mouse_genomes_project 6 98576424 98577463 - Nup210 protein_coding processed_transcript MGP_CBAJ_T0078495.1 MGP_CBAJ_G0030708.1 mouse_genomes_project 6 98584560 98589635 - Nup210 protein_coding processed_transcript MGP_CBAJ_T0078496.1 MGP_CBAJ_G0030708.1 mouse_genomes_project 6 98610138 98622952 - Nup210 protein_coding retained_intron MGP_CBAJ_T0078497.1 MGP_CBAJ_G0030708.1 mouse_genomes_project 6 98643986 98646426 - Nup210 protein_coding retained_intron MGP_CBAJ_T0076470.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34793981 34995952 + MGP_CBAJ_P0076470 Cald1 protein_coding protein_coding MGP_CBAJ_T0076471.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34793993 34970642 + MGP_CBAJ_P0076471 Cald1 protein_coding protein_coding MGP_CBAJ_T0076472.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34794025 34900122 + Cald1 protein_coding retained_intron MGP_CBAJ_T0076473.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34794025 34959280 + Cald1 protein_coding retained_intron MGP_CBAJ_T0076474.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34794045 34995964 + MGP_CBAJ_P0076474 Cald1 protein_coding protein_coding MGP_CBAJ_T0076475.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34794046 34995964 + MGP_CBAJ_P0076475 Cald1 protein_coding protein_coding MGP_CBAJ_T0076476.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34794101 34868540 + Cald1 protein_coding retained_intron MGP_CBAJ_T0076477.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34897785 34991815 + MGP_CBAJ_P0076477 Cald1 protein_coding unknown_likely_coding MGP_CBAJ_T0076478.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34897813 34991815 + MGP_CBAJ_P0076478 Cald1 protein_coding unknown_likely_coding MGP_CBAJ_T0076479.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34926530 34995971 + MGP_CBAJ_P0076479 Cald1 protein_coding protein_coding MGP_CBAJ_T0076480.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34926578 34927843 + Cald1 protein_coding retained_intron MGP_CBAJ_T0076481.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34926578 34995966 + MGP_CBAJ_P0076481 Cald1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076482.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34926722 34992281 + MGP_CBAJ_P0076482 Cald1 protein_coding protein_coding MGP_CBAJ_T0076483.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34963003 34972945 + MGP_CBAJ_P0076483 Cald1 protein_coding protein_coding MGP_CBAJ_T0076484.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34963032 34972855 + MGP_CBAJ_P0076484 Cald1 protein_coding protein_coding MGP_CBAJ_T0076485.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34963058 34972855 + MGP_CBAJ_P0076485 Cald1 protein_coding protein_coding MGP_CBAJ_T0076486.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34963437 34980680 + MGP_CBAJ_P0076486 Cald1 protein_coding protein_coding MGP_CBAJ_T0076487.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34964820 34970561 + Cald1 protein_coding retained_intron MGP_CBAJ_T0076488.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34981413 34985407 + Cald1 protein_coding retained_intron MGP_CBAJ_T0076489.1 MGP_CBAJ_G0030235.1 mouse_genomes_project 6 34983530 34985214 + Cald1 protein_coding retained_intron MGP_CBAJ_T0001980.1 MGP_CBAJ_G0001896.1 mouse_genomes_project 6 78863581 78865537 + TEC TEC MGP_CBAJ_T0015091.1 MGP_CBAJ_G0013203.1 mouse_genomes_project 6 42709021 42709397 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010684.1 MGP_CBAJ_G0008822.1 mouse_genomes_project 6 134304644 134304705 + Mir7231 miRNA miRNA MGP_CBAJ_T0079143.1 MGP_CBAJ_G0030829.1 mouse_genomes_project 6 126691692 126758968 + MGP_CBAJ_P0079143 Fam21 protein_coding protein_coding MGP_CBAJ_T0079144.1 MGP_CBAJ_G0030829.1 mouse_genomes_project 6 126691700 126750110 + MGP_CBAJ_P0079144 Fam21 protein_coding protein_coding MGP_CBAJ_T0079145.1 MGP_CBAJ_G0030829.1 mouse_genomes_project 6 126691710 126704215 + MGP_CBAJ_P0079145 Fam21 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079146.1 MGP_CBAJ_G0030829.1 mouse_genomes_project 6 126691749 126692978 + Fam21 protein_coding retained_intron MGP_CBAJ_T0079147.1 MGP_CBAJ_G0030829.1 mouse_genomes_project 6 126691776 126697624 + MGP_CBAJ_P0079147 Fam21 protein_coding protein_coding MGP_CBAJ_T0079148.1 MGP_CBAJ_G0030829.1 mouse_genomes_project 6 126691791 126699804 + MGP_CBAJ_P0079148 Fam21 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079149.1 MGP_CBAJ_G0030829.1 mouse_genomes_project 6 126691861 126758947 + Fam21 protein_coding retained_intron MGP_CBAJ_T0079150.1 MGP_CBAJ_G0030829.1 mouse_genomes_project 6 126692171 126754019 + MGP_CBAJ_P0079150 Fam21 protein_coding protein_coding MGP_CBAJ_T0079151.1 MGP_CBAJ_G0030829.1 mouse_genomes_project 6 126704219 126714127 + Fam21 protein_coding retained_intron MGP_CBAJ_T0079152.1 MGP_CBAJ_G0030829.1 mouse_genomes_project 6 126708188 126718024 + MGP_CBAJ_P0079152 Fam21 protein_coding protein_coding MGP_CBAJ_T0079153.1 MGP_CBAJ_G0030829.1 mouse_genomes_project 6 126716575 126720438 + Fam21 protein_coding retained_intron MGP_CBAJ_T0079154.1 MGP_CBAJ_G0030829.1 mouse_genomes_project 6 126750840 126751863 + Fam21 protein_coding retained_intron MGP_CBAJ_T0079155.1 MGP_CBAJ_G0030829.1 mouse_genomes_project 6 126751590 126754004 + Fam21 protein_coding retained_intron MGP_CBAJ_T0077000.1 MGP_CBAJ_G0030374.1 mouse_genomes_project 6 50773147 50775718 + MGP_CBAJ_P0077000 Gimap9 protein_coding protein_coding MGP_CBAJ_T0077001.1 MGP_CBAJ_G0030374.1 mouse_genomes_project 6 50774529 50776131 + MGP_CBAJ_P0077001 Gimap9 protein_coding protein_coding MGP_CBAJ_T0011522.1 MGP_CBAJ_G0009660.1 mouse_genomes_project 6 54827773 54827950 + Gm27543 misc_RNA misc_RNA MGP_CBAJ_T0077383.1 MGP_CBAJ_G0030475.1 mouse_genomes_project 6 61180348 61201450 - MGP_CBAJ_P0077383 protein_coding protein_coding MGP_CBAJ_T0102018.1 MGP_CBAJ_G0040049.1 mouse_genomes_project 6 133209746 133260080 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0008433.1 MGP_CBAJ_G0006819.1 mouse_genomes_project 6 31005851 31007651 + Gm13833 lincRNA lincRNA MGP_CBAJ_T0078797.1 MGP_CBAJ_G0030769.1 mouse_genomes_project 6 118435486 118475864 + MGP_CBAJ_P0078797 Edem1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078798.1 MGP_CBAJ_G0030769.1 mouse_genomes_project 6 118435519 118475856 + MGP_CBAJ_P0078798 Edem1 protein_coding protein_coding MGP_CBAJ_T0078799.1 MGP_CBAJ_G0030769.1 mouse_genomes_project 6 118445253 118451908 + Edem1 protein_coding processed_transcript MGP_CBAJ_T0078800.1 MGP_CBAJ_G0030769.1 mouse_genomes_project 6 118461170 118466149 + Edem1 protein_coding retained_intron MGP_CBAJ_T0078801.1 MGP_CBAJ_G0030769.1 mouse_genomes_project 6 118466897 118472051 + Edem1 protein_coding retained_intron MGP_CBAJ_T0099423.1 MGP_CBAJ_G0037678.1 mouse_genomes_project 6 35553892 35554048 + Gm23435 snRNA snRNA MGP_CBAJ_T0015414.1 MGP_CBAJ_G0013526.1 mouse_genomes_project 6 146228480 146228826 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010628.1 MGP_CBAJ_G0008766.1 mouse_genomes_project 6 29017999 29018142 - Gm44354 miRNA miRNA MGP_CBAJ_T0076917.1 MGP_CBAJ_G0030355.1 mouse_genomes_project 6 49782676 49793700 + Zfp398 protein_coding retained_intron MGP_CBAJ_T0076918.1 MGP_CBAJ_G0030355.1 mouse_genomes_project 6 49782679 49813355 + MGP_CBAJ_P0076918 Zfp398 protein_coding protein_coding MGP_CBAJ_T0076919.1 MGP_CBAJ_G0030355.1 mouse_genomes_project 6 49782710 49819191 + MGP_CBAJ_P0076919 Zfp398 protein_coding protein_coding MGP_CBAJ_T0001902.1 MGP_CBAJ_G0001818.1 mouse_genomes_project 6 28070747 28073645 + TEC TEC MGP_CBAJ_T0001876.1 MGP_CBAJ_G0001792.1 mouse_genomes_project 6 1841195 1842423 + TEC TEC MGP_CBAJ_T0079507.1 MGP_CBAJ_G0030891.1 mouse_genomes_project 6 134037151 134041830 - MGP_CBAJ_P0079507 Gdf3 protein_coding protein_coding MGP_CBAJ_T0079508.1 MGP_CBAJ_G0030891.1 mouse_genomes_project 6 134039769 134041567 - Gdf3 protein_coding processed_transcript MGP_CBAJ_T0002146.1 MGP_CBAJ_G0002061.1 mouse_genomes_project 6 162681416 162685262 - TEC TEC MGP_CBAJ_T0078581.1 MGP_CBAJ_G0030725.1 mouse_genomes_project 6 100021382 100400018 - MGP_CBAJ_P0078581 Prickle2 protein_coding protein_coding MGP_CBAJ_T0078582.1 MGP_CBAJ_G0030725.1 mouse_genomes_project 6 100021382 100235693 - MGP_CBAJ_P0078582 Prickle2 protein_coding protein_coding MGP_CBAJ_T0078583.1 MGP_CBAJ_G0030725.1 mouse_genomes_project 6 100021384 100200524 - MGP_CBAJ_P0078583 Prickle2 protein_coding protein_coding MGP_CBAJ_T0078584.1 MGP_CBAJ_G0030725.1 mouse_genomes_project 6 100025859 100145959 - MGP_CBAJ_P0078584 Prickle2 protein_coding protein_coding MGP_CBAJ_T0079758.1 MGP_CBAJ_G0030947.1 mouse_genomes_project 6 136856214 136899369 + MGP_CBAJ_P0079758 Chd4 protein_coding protein_coding MGP_CBAJ_T0079759.1 MGP_CBAJ_G0030947.1 mouse_genomes_project 6 136856214 136899375 + MGP_CBAJ_P0079759 Chd4 protein_coding protein_coding MGP_CBAJ_T0079760.1 MGP_CBAJ_G0030947.1 mouse_genomes_project 6 136856395 136899375 + MGP_CBAJ_P0079760 Chd4 protein_coding protein_coding MGP_CBAJ_T0079761.1 MGP_CBAJ_G0030947.1 mouse_genomes_project 6 136856404 136897837 + MGP_CBAJ_P0079761 Chd4 protein_coding unknown_likely_coding MGP_CBAJ_T0079762.1 MGP_CBAJ_G0030947.1 mouse_genomes_project 6 136856410 136857617 + Chd4 protein_coding retained_intron MGP_CBAJ_T0079763.1 MGP_CBAJ_G0030947.1 mouse_genomes_project 6 136856814 136860750 + MGP_CBAJ_P0079763 Chd4 protein_coding protein_coding MGP_CBAJ_T0079764.1 MGP_CBAJ_G0030947.1 mouse_genomes_project 6 136876668 136879631 + Chd4 protein_coding retained_intron MGP_CBAJ_T0079765.1 MGP_CBAJ_G0030947.1 mouse_genomes_project 6 136876696 136886919 + MGP_CBAJ_P0079765 Chd4 protein_coding protein_coding MGP_CBAJ_T0079766.1 MGP_CBAJ_G0030947.1 mouse_genomes_project 6 136884738 136885842 + Chd4 protein_coding retained_intron MGP_CBAJ_T0076948.1 MGP_CBAJ_G0030362.1 mouse_genomes_project 6 50499520 50515834 - MGP_CBAJ_P0076948 Zfp467 protein_coding protein_coding MGP_CBAJ_T0076949.1 MGP_CBAJ_G0030362.1 mouse_genomes_project 6 50499520 50518269 - MGP_CBAJ_P0076949 Zfp467 protein_coding protein_coding MGP_CBAJ_T0076950.1 MGP_CBAJ_G0030362.1 mouse_genomes_project 6 50499520 50518372 - MGP_CBAJ_P0076950 Zfp467 protein_coding protein_coding MGP_CBAJ_T0076951.1 MGP_CBAJ_G0030362.1 mouse_genomes_project 6 50505989 50518178 - MGP_CBAJ_P0076951 Zfp467 protein_coding protein_coding MGP_CBAJ_T0076952.1 MGP_CBAJ_G0030362.1 mouse_genomes_project 6 50508436 50517885 - MGP_CBAJ_P0076952 Zfp467 protein_coding protein_coding MGP_CBAJ_T0076953.1 MGP_CBAJ_G0030362.1 mouse_genomes_project 6 50508436 50518630 - MGP_CBAJ_P0076953 Zfp467 protein_coding protein_coding MGP_CBAJ_T0076954.1 MGP_CBAJ_G0030362.1 mouse_genomes_project 6 50508436 50517891 - MGP_CBAJ_P0076954 Zfp467 protein_coding protein_coding MGP_CBAJ_T0076955.1 MGP_CBAJ_G0030362.1 mouse_genomes_project 6 50508459 50518247 - MGP_CBAJ_P0076955 Zfp467 protein_coding protein_coding MGP_CBAJ_T0076956.1 MGP_CBAJ_G0030362.1 mouse_genomes_project 6 50509455 50518498 - MGP_CBAJ_P0076956 Zfp467 protein_coding protein_coding MGP_CBAJ_T0076957.1 MGP_CBAJ_G0030362.1 mouse_genomes_project 6 50511213 50518163 - MGP_CBAJ_P0076957 Zfp467 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076958.1 MGP_CBAJ_G0030362.1 mouse_genomes_project 6 50514560 50518299 - Zfp467 protein_coding retained_intron MGP_CBAJ_T0015049.1 MGP_CBAJ_G0013161.1 mouse_genomes_project 6 18260173 18260280 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099428.1 MGP_CBAJ_G0037683.1 mouse_genomes_project 6 44027603 44027705 - Gm22363 snRNA snRNA MGP_CBAJ_T0008525.1 MGP_CBAJ_G0006883.1 mouse_genomes_project 6 76643208 76653743 - Gm44175 lincRNA lincRNA MGP_CBAJ_T0015221.1 MGP_CBAJ_G0013333.1 mouse_genomes_project 6 78961243 78961667 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005026.1 MGP_CBAJ_G0004285.1 mouse_genomes_project 6 149754180 149756329 + Gm26653 antisense antisense MGP_CBAJ_T0078225.1 MGP_CBAJ_G0030649.1 mouse_genomes_project 6 94320420 94372895 + MGP_CBAJ_P0078225 Gfpt1 protein_coding protein_coding MGP_CBAJ_T0078226.1 MGP_CBAJ_G0030649.1 mouse_genomes_project 6 94320420 94333865 + MGP_CBAJ_P0078226 Gfpt1 protein_coding protein_coding MGP_CBAJ_T0078227.1 MGP_CBAJ_G0030649.1 mouse_genomes_project 6 94320424 94332389 + Gfpt1 protein_coding processed_transcript MGP_CBAJ_T0078228.1 MGP_CBAJ_G0030649.1 mouse_genomes_project 6 94320424 94323233 + Gfpt1 protein_coding retained_intron MGP_CBAJ_T0078229.1 MGP_CBAJ_G0030649.1 mouse_genomes_project 6 94320424 94333865 + MGP_CBAJ_P0078229 Gfpt1 protein_coding protein_coding MGP_CBAJ_T0078230.1 MGP_CBAJ_G0030649.1 mouse_genomes_project 6 94320465 94368942 + MGP_CBAJ_P0078230 Gfpt1 protein_coding protein_coding MGP_CBAJ_T0078231.1 MGP_CBAJ_G0030649.1 mouse_genomes_project 6 94355419 94364974 + Gfpt1 protein_coding retained_intron MGP_CBAJ_T0015214.1 MGP_CBAJ_G0013326.1 mouse_genomes_project 6 77029064 77029648 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015370.1 MGP_CBAJ_G0013482.1 mouse_genomes_project 6 138278673 138279086 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0076771.1 MGP_CBAJ_G0030308.1 mouse_genomes_project 6 43096750 43101281 + MGP_CBAJ_P0076771 Pip protein_coding protein_coding MGP_CBAJ_T0076772.1 MGP_CBAJ_G0030308.1 mouse_genomes_project 6 43096783 43101173 + MGP_CBAJ_P0076772 Pip protein_coding protein_coding MGP_CBAJ_T0076773.1 MGP_CBAJ_G0030308.1 mouse_genomes_project 6 43096800 43100800 + MGP_CBAJ_P0076773 Pip protein_coding protein_coding MGP_CBAJ_T0015116.1 MGP_CBAJ_G0013228.1 mouse_genomes_project 6 51142819 51144292 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0076552.1 MGP_CBAJ_G0030248.1 mouse_genomes_project 6 37156627 37258986 - MGP_CBAJ_P0076552 Ptn protein_coding protein_coding MGP_CBAJ_T0076553.1 MGP_CBAJ_G0030248.1 mouse_genomes_project 6 37183711 37258945 - MGP_CBAJ_P0076553 Ptn protein_coding protein_coding MGP_CBAJ_T0015135.1 MGP_CBAJ_G0013247.1 mouse_genomes_project 6 56530550 56531307 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008427.1 MGP_CBAJ_G0006814.1 mouse_genomes_project 6 30258187 30261237 + 1700012C14Rik lincRNA lincRNA MGP_CBAJ_T0008428.1 MGP_CBAJ_G0006814.1 mouse_genomes_project 6 30259044 30261289 + 1700012C14Rik lincRNA lincRNA MGP_CBAJ_T0004987.1 MGP_CBAJ_G0004250.1 mouse_genomes_project 6 126272213 126282181 + antisense antisense MGP_CBAJ_T0078621.1 MGP_CBAJ_G0030733.1 mouse_genomes_project 6 103350991 103351090 + MGP_CBAJ_P0078621 Gm10234 protein_coding protein_coding MGP_CBAJ_T0008632.1 MGP_CBAJ_G0006971.1 mouse_genomes_project 6 141273745 141276720 + Gm26656 lincRNA lincRNA MGP_CBAJ_T0001952.1 MGP_CBAJ_G0001868.1 mouse_genomes_project 6 56399452 56401623 + TEC TEC MGP_CBAJ_T0080590.1 MGP_CBAJ_G0031152.1 mouse_genomes_project 6 161620641 161660034 - MGP_CBAJ_P0080590 Tm7sf3 protein_coding protein_coding MGP_CBAJ_T0080591.1 MGP_CBAJ_G0031152.1 mouse_genomes_project 6 161629175 161659935 - MGP_CBAJ_P0080591 Tm7sf3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080592.1 MGP_CBAJ_G0031152.1 mouse_genomes_project 6 161645856 161668276 - Tm7sf3 protein_coding processed_transcript MGP_CBAJ_T0080593.1 MGP_CBAJ_G0031152.1 mouse_genomes_project 6 161647867 161668286 - Tm7sf3 protein_coding processed_transcript MGP_CBAJ_T0076023.1 MGP_CBAJ_G0030148.1 mouse_genomes_project 6 16324034 16389193 - MGP_CBAJ_P0076023 protein_coding protein_coding MGP_CBAJ_T0076024.1 MGP_CBAJ_G0030148.1 mouse_genomes_project 6 16324053 16389180 - protein_coding retained_intron MGP_CBAJ_T0076025.1 MGP_CBAJ_G0030148.1 mouse_genomes_project 6 16346471 16347775 - protein_coding retained_intron MGP_CBAJ_T0076026.1 MGP_CBAJ_G0030148.1 mouse_genomes_project 6 16348443 16389181 - MGP_CBAJ_P0076026 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076027.1 MGP_CBAJ_G0030148.1 mouse_genomes_project 6 16349730 16389197 - protein_coding processed_transcript MGP_CBAJ_T0100676.1 MGP_CBAJ_G0038931.1 mouse_genomes_project 6 72462842 72462982 - Gm25910 snoRNA snoRNA MGP_CBAJ_T0078372.1 MGP_CBAJ_G0030678.1 mouse_genomes_project 6 96216204 96217367 - Podxl2 protein_coding processed_transcript MGP_CBAJ_T0078373.1 MGP_CBAJ_G0030678.1 mouse_genomes_project 6 96216413 96248457 - MGP_CBAJ_P0078373 Podxl2 protein_coding protein_coding MGP_CBAJ_T0078374.1 MGP_CBAJ_G0030678.1 mouse_genomes_project 6 96217184 96219566 - Podxl2 protein_coding retained_intron MGP_CBAJ_T0078375.1 MGP_CBAJ_G0030678.1 mouse_genomes_project 6 96217822 96223017 - Podxl2 protein_coding processed_transcript MGP_CBAJ_T0078376.1 MGP_CBAJ_G0030678.1 mouse_genomes_project 6 96220607 96222483 - Podxl2 protein_coding retained_intron MGP_CBAJ_T0078377.1 MGP_CBAJ_G0030678.1 mouse_genomes_project 6 96223318 96248216 - MGP_CBAJ_P0078377 Podxl2 protein_coding protein_coding MGP_CBAJ_T0078378.1 MGP_CBAJ_G0030678.1 mouse_genomes_project 6 96223318 96248274 - MGP_CBAJ_P0078378 Podxl2 protein_coding protein_coding MGP_CBAJ_T0078379.1 MGP_CBAJ_G0030678.1 mouse_genomes_project 6 96223453 96238757 - Podxl2 protein_coding processed_transcript MGP_CBAJ_T0078380.1 MGP_CBAJ_G0030678.1 mouse_genomes_project 6 96237766 96248467 - Podxl2 protein_coding retained_intron MGP_CBAJ_T0078381.1 MGP_CBAJ_G0030678.1 mouse_genomes_project 6 96238301 96247855 - Podxl2 protein_coding retained_intron MGP_CBAJ_T0000133.1 MGP_CBAJ_G0000101.1 mouse_genomes_project 6 72003628 72004348 + MGP_CBAJ_P0000133 IG_V_gene IG_V_gene MGP_CBAJ_T0080122.1 MGP_CBAJ_G0031057.1 mouse_genomes_project 6 146066161 146067079 - MGP_CBAJ_P0080122 Tas2r116 protein_coding protein_coding MGP_CBAJ_T0078455.1 MGP_CBAJ_G0030703.1 mouse_genomes_project 6 97891317 97919128 - MGP_CBAJ_P0078455 Cfap100 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078456.1 MGP_CBAJ_G0030703.1 mouse_genomes_project 6 97891574 97918773 - MGP_CBAJ_P0078456 Cfap100 protein_coding protein_coding MGP_CBAJ_T0078457.1 MGP_CBAJ_G0030703.1 mouse_genomes_project 6 97891575 97918762 - MGP_CBAJ_P0078457 Cfap100 protein_coding unknown_likely_coding MGP_CBAJ_T0078458.1 MGP_CBAJ_G0030703.1 mouse_genomes_project 6 97891576 97918754 - MGP_CBAJ_P0078458 Cfap100 protein_coding protein_coding MGP_CBAJ_T0078459.1 MGP_CBAJ_G0030703.1 mouse_genomes_project 6 97908713 97919138 - MGP_CBAJ_P0078459 Cfap100 protein_coding protein_coding MGP_CBAJ_T0078460.1 MGP_CBAJ_G0030703.1 mouse_genomes_project 6 97908926 97918776 - MGP_CBAJ_P0078460 Cfap100 protein_coding protein_coding MGP_CBAJ_T0078461.1 MGP_CBAJ_G0030703.1 mouse_genomes_project 6 97916824 97918736 - MGP_CBAJ_P0078461 Cfap100 protein_coding protein_coding MGP_CBAJ_T0078462.1 MGP_CBAJ_G0030703.1 mouse_genomes_project 6 97918236 97918926 - Cfap100 protein_coding processed_transcript MGP_CBAJ_T0002632.1 MGP_CBAJ_G0002517.1 mouse_genomes_project 6 42354692 42355181 + MGP_CBAJ_P0002632 Trbv26 TR_V_gene TR_V_gene MGP_CBAJ_T0002633.1 MGP_CBAJ_G0002517.1 mouse_genomes_project 6 42354712 42355181 + MGP_CBAJ_P0002633 Trbv26 TR_V_gene TR_V_gene MGP_CBAJ_T0000199.1 MGP_CBAJ_G0000149.1 mouse_genomes_project 6 75227552 75228112 - MGP_CBAJ_P0000199 IG_V_gene IG_V_gene MGP_CBAJ_T0000200.1 MGP_CBAJ_G0000149.1 mouse_genomes_project 6 75227552 75228098 - MGP_CBAJ_P0000200 IG_V_gene IG_V_gene MGP_CBAJ_T0078931.1 MGP_CBAJ_G0030791.1 mouse_genomes_project 6 123678440 123690693 + MGP_CBAJ_P0078931 Il17re protein_coding protein_coding MGP_CBAJ_T0078932.1 MGP_CBAJ_G0030791.1 mouse_genomes_project 6 123678717 123680831 + Il17re protein_coding retained_intron MGP_CBAJ_T0078933.1 MGP_CBAJ_G0030791.1 mouse_genomes_project 6 123678763 123690332 + MGP_CBAJ_P0078933 Il17re protein_coding protein_coding MGP_CBAJ_T0078934.1 MGP_CBAJ_G0030791.1 mouse_genomes_project 6 123678790 123690313 + MGP_CBAJ_P0078934 Il17re protein_coding protein_coding MGP_CBAJ_T0078935.1 MGP_CBAJ_G0030791.1 mouse_genomes_project 6 123678851 123690082 + MGP_CBAJ_P0078935 Il17re protein_coding nonsense_mediated_decay MGP_CBAJ_T0078936.1 MGP_CBAJ_G0030791.1 mouse_genomes_project 6 123678851 123690082 + MGP_CBAJ_P0078936 Il17re protein_coding protein_coding MGP_CBAJ_T0078937.1 MGP_CBAJ_G0030791.1 mouse_genomes_project 6 123684744 123690691 + Il17re protein_coding retained_intron MGP_CBAJ_T0078938.1 MGP_CBAJ_G0030791.1 mouse_genomes_project 6 123686300 123689926 + Il17re protein_coding retained_intron MGP_CBAJ_T0004866.1 MGP_CBAJ_G0004174.1 mouse_genomes_project 6 51134203 51146255 - 4930563H07Rik antisense antisense MGP_CBAJ_T0010673.1 MGP_CBAJ_G0008811.1 mouse_genomes_project 6 123639265 123639345 + Gm24387 miRNA miRNA MGP_CBAJ_T0008453.1 MGP_CBAJ_G0006832.1 mouse_genomes_project 6 34331792 34338950 + Gm13855 lincRNA lincRNA MGP_CBAJ_T0005018.1 MGP_CBAJ_G0004277.1 mouse_genomes_project 6 147492520 147495650 - Gm17088 antisense antisense MGP_CBAJ_T0078771.1 MGP_CBAJ_G0030763.1 mouse_genomes_project 6 117035838 117076172 + MGP_CBAJ_P0078771 Lrrn1 protein_coding protein_coding MGP_CBAJ_T0080107.1 MGP_CBAJ_G0031043.1 mouse_genomes_project 6 145686289 145686958 + MGP_CBAJ_P0080107 protein_coding protein_coding MGP_CBAJ_T0079087.1 MGP_CBAJ_G0030819.1 mouse_genomes_project 6 126157768 126191604 - MGP_CBAJ_P0079087 Tmem40 protein_coding protein_coding MGP_CBAJ_T0079088.1 MGP_CBAJ_G0030819.1 mouse_genomes_project 6 126157778 126191332 - MGP_CBAJ_P0079088 Tmem40 protein_coding protein_coding MGP_CBAJ_T0079089.1 MGP_CBAJ_G0030819.1 mouse_genomes_project 6 126157780 126162946 - Tmem40 protein_coding processed_transcript MGP_CBAJ_T0079090.1 MGP_CBAJ_G0030819.1 mouse_genomes_project 6 126158170 126163284 - Tmem40 protein_coding retained_intron MGP_CBAJ_T0079091.1 MGP_CBAJ_G0030819.1 mouse_genomes_project 6 126158270 126194613 - MGP_CBAJ_P0079091 Tmem40 protein_coding protein_coding MGP_CBAJ_T0079092.1 MGP_CBAJ_G0030819.1 mouse_genomes_project 6 126158302 126185466 - MGP_CBAJ_P0079092 Tmem40 protein_coding protein_coding MGP_CBAJ_T0079463.1 MGP_CBAJ_G0030884.1 mouse_genomes_project 6 133658068 133670009 - MGP_CBAJ_P0079463 Klrg1 protein_coding protein_coding MGP_CBAJ_T0077627.1 MGP_CBAJ_G0030535.1 mouse_genomes_project 6 77552096 77617377 + MGP_CBAJ_P0077627 St3gal5 protein_coding protein_coding MGP_CBAJ_T0077628.1 MGP_CBAJ_G0030535.1 mouse_genomes_project 6 77552127 77617377 + MGP_CBAJ_P0077628 St3gal5 protein_coding protein_coding MGP_CBAJ_T0077629.1 MGP_CBAJ_G0030535.1 mouse_genomes_project 6 77552261 77606460 + MGP_CBAJ_P0077629 St3gal5 protein_coding protein_coding MGP_CBAJ_T0077630.1 MGP_CBAJ_G0030535.1 mouse_genomes_project 6 77572202 77602078 + MGP_CBAJ_P0077630 St3gal5 protein_coding protein_coding MGP_CBAJ_T0079482.1 MGP_CBAJ_G0030887.1 mouse_genomes_project 6 133853695 133872785 - MGP_CBAJ_P0079482 Rimklb protein_coding nonsense_mediated_decay MGP_CBAJ_T0079483.1 MGP_CBAJ_G0030887.1 mouse_genomes_project 6 133853697 133859130 - Rimklb protein_coding processed_transcript MGP_CBAJ_T0079484.1 MGP_CBAJ_G0030887.1 mouse_genomes_project 6 133859498 133894716 - MGP_CBAJ_P0079484 Rimklb protein_coding protein_coding MGP_CBAJ_T0079485.1 MGP_CBAJ_G0030887.1 mouse_genomes_project 6 133860657 133872733 - MGP_CBAJ_P0079485 Rimklb protein_coding protein_coding MGP_CBAJ_T0079486.1 MGP_CBAJ_G0030887.1 mouse_genomes_project 6 133865488 133878755 - Rimklb protein_coding processed_transcript MGP_CBAJ_T0079487.1 MGP_CBAJ_G0030887.1 mouse_genomes_project 6 133870363 133894650 - MGP_CBAJ_P0079487 Rimklb protein_coding protein_coding MGP_CBAJ_T0079488.1 MGP_CBAJ_G0030887.1 mouse_genomes_project 6 133878738 133906941 - MGP_CBAJ_P0079488 Rimklb protein_coding protein_coding MGP_CBAJ_T0098078.1 MGP_CBAJ_G0036351.1 mouse_genomes_project 6 122295846 122295946 - n-R5s165 rRNA rRNA MGP_CBAJ_T0008407.1 MGP_CBAJ_G0006800.1 mouse_genomes_project 6 11174585 11177203 + 1700016P04Rik lincRNA lincRNA MGP_CBAJ_T0018057.1 MGP_CBAJ_G0015391.1 mouse_genomes_project 6 137317665 137335180 + Gm26728 processed_transcript antisense MGP_CBAJ_T0018058.1 MGP_CBAJ_G0015391.1 mouse_genomes_project 6 137317669 137319204 + Gm26728 processed_transcript retained_intron MGP_CBAJ_T0018059.1 MGP_CBAJ_G0015391.1 mouse_genomes_project 6 137317671 137325721 + Gm26728 processed_transcript antisense MGP_CBAJ_T0099460.1 MGP_CBAJ_G0037715.1 mouse_genomes_project 6 136705686 136705789 + Gm23851 snRNA snRNA MGP_CBAJ_T0015427.1 MGP_CBAJ_G0013539.1 mouse_genomes_project 6 154314191 154314605 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0079246.1 MGP_CBAJ_G0030850.1 mouse_genomes_project 6 129250337 129269169 - MGP_CBAJ_P0079246 Zfp9 protein_coding protein_coding MGP_CBAJ_T0079247.1 MGP_CBAJ_G0030850.1 mouse_genomes_project 6 129255126 129256761 - Zfp9 protein_coding retained_intron MGP_CBAJ_T0015111.1 MGP_CBAJ_G0013223.1 mouse_genomes_project 6 50927070 50928443 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008514.1 MGP_CBAJ_G0006873.1 mouse_genomes_project 6 64249780 64254102 + Gm35386 lincRNA lincRNA MGP_CBAJ_T0004902.1 MGP_CBAJ_G0004200.1 mouse_genomes_project 6 88650843 88652972 - Gm15864 antisense antisense MGP_CBAJ_T0080163.1 MGP_CBAJ_G0031071.1 mouse_genomes_project 6 148234620 148265192 + MGP_CBAJ_P0080163 Crebl2 protein_coding protein_coding MGP_CBAJ_T0080164.1 MGP_CBAJ_G0031071.1 mouse_genomes_project 6 148234694 148255852 + Crebl2 protein_coding retained_intron MGP_CBAJ_T0080165.1 MGP_CBAJ_G0031071.1 mouse_genomes_project 6 148234721 148262427 + MGP_CBAJ_P0080165 Crebl2 protein_coding protein_coding MGP_CBAJ_T0080166.1 MGP_CBAJ_G0031071.1 mouse_genomes_project 6 148257434 148260856 + Crebl2 protein_coding retained_intron MGP_CBAJ_T0077757.1 MGP_CBAJ_G0030562.1 mouse_genomes_project 6 84547957 84550906 + MGP_CBAJ_P0077757 Reg2 protein_coding protein_coding MGP_CBAJ_T0077971.1 MGP_CBAJ_G0030607.1 mouse_genomes_project 6 90595623 90603209 + MGP_CBAJ_P0077971 Nagk protein_coding protein_coding MGP_CBAJ_T0077972.1 MGP_CBAJ_G0030607.1 mouse_genomes_project 6 90595669 90603207 + MGP_CBAJ_P0077972 Nagk protein_coding protein_coding MGP_CBAJ_T0077973.1 MGP_CBAJ_G0030607.1 mouse_genomes_project 6 90595802 90599274 + Nagk protein_coding retained_intron MGP_CBAJ_T0077974.1 MGP_CBAJ_G0030607.1 mouse_genomes_project 6 90595849 90602987 + Nagk protein_coding processed_transcript MGP_CBAJ_T0077975.1 MGP_CBAJ_G0030607.1 mouse_genomes_project 6 90595876 90604073 + MGP_CBAJ_P0077975 Nagk protein_coding protein_coding MGP_CBAJ_T0077976.1 MGP_CBAJ_G0030607.1 mouse_genomes_project 6 90596883 90597635 + Nagk protein_coding retained_intron MGP_CBAJ_T0077977.1 MGP_CBAJ_G0030607.1 mouse_genomes_project 6 90597684 90600928 + Nagk protein_coding retained_intron MGP_CBAJ_T0077978.1 MGP_CBAJ_G0030607.1 mouse_genomes_project 6 90598602 90600018 + Nagk protein_coding retained_intron MGP_CBAJ_T0077979.1 MGP_CBAJ_G0030607.1 mouse_genomes_project 6 90598635 90601785 + Nagk protein_coding processed_transcript MGP_CBAJ_T0077980.1 MGP_CBAJ_G0030607.1 mouse_genomes_project 6 90602800 90604671 + Nagk protein_coding retained_intron MGP_CBAJ_T0004850.1 MGP_CBAJ_G0004160.1 mouse_genomes_project 6 37401396 37458024 + 1700111E14Rik antisense antisense MGP_CBAJ_T0076109.1 MGP_CBAJ_G0030166.1 mouse_genomes_project 6 23075843 23165275 - MGP_CBAJ_P0076109 Slc13a1 protein_coding protein_coding MGP_CBAJ_T0076110.1 MGP_CBAJ_G0030166.1 mouse_genomes_project 6 23076110 23097775 - Slc13a1 protein_coding processed_transcript MGP_CBAJ_T0076111.1 MGP_CBAJ_G0030166.1 mouse_genomes_project 6 23092819 23097772 - Slc13a1 protein_coding retained_intron MGP_CBAJ_T0076112.1 MGP_CBAJ_G0030166.1 mouse_genomes_project 6 23124025 23165273 - Slc13a1 protein_coding retained_intron MGP_CBAJ_T0008604.1 MGP_CBAJ_G0006945.1 mouse_genomes_project 6 128169191 128174016 + Gm43983 lincRNA lincRNA MGP_CBAJ_T0011495.1 MGP_CBAJ_G0009633.1 mouse_genomes_project 6 8298111 8298203 + Gm27894 misc_RNA misc_RNA MGP_CBAJ_T0080439.1 MGP_CBAJ_G0031128.1 mouse_genomes_project 6 156982592 156987720 + MGP_CBAJ_P0080439 Spx protein_coding unknown_likely_coding MGP_CBAJ_T0080440.1 MGP_CBAJ_G0031128.1 mouse_genomes_project 6 156982592 156987720 + MGP_CBAJ_P0080440 Spx protein_coding protein_coding MGP_CBAJ_T0080441.1 MGP_CBAJ_G0031128.1 mouse_genomes_project 6 156983163 156988879 + Spx protein_coding retained_intron MGP_CBAJ_T0080442.1 MGP_CBAJ_G0031128.1 mouse_genomes_project 6 156983672 156988879 + Spx protein_coding retained_intron MGP_CBAJ_T0102041.1 MGP_CBAJ_G0040071.1 mouse_genomes_project 6 146127943 146128936 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0077420.1 MGP_CBAJ_G0030488.1 mouse_genomes_project 6 62775425 62857646 - MGP_CBAJ_P0077420 Gprin3 protein_coding protein_coding MGP_CBAJ_T0004985.1 MGP_CBAJ_G0004248.1 mouse_genomes_project 6 124300611 124361223 + Gm15083 antisense antisense MGP_CBAJ_T0079396.1 MGP_CBAJ_G0030872.1 mouse_genomes_project 6 131914479 131922677 - Atp6v1e1 protein_coding retained_intron MGP_CBAJ_T0079397.1 MGP_CBAJ_G0030872.1 mouse_genomes_project 6 131915410 131939799 - MGP_CBAJ_P0079397 Atp6v1e1 protein_coding protein_coding MGP_CBAJ_T0079398.1 MGP_CBAJ_G0030872.1 mouse_genomes_project 6 131915420 131935411 - MGP_CBAJ_P0079398 Atp6v1e1 protein_coding protein_coding MGP_CBAJ_T0079399.1 MGP_CBAJ_G0030872.1 mouse_genomes_project 6 131925145 131939691 - Atp6v1e1 protein_coding retained_intron MGP_CBAJ_T0079400.1 MGP_CBAJ_G0030872.1 mouse_genomes_project 6 131925483 131939698 - MGP_CBAJ_P0079400 Atp6v1e1 protein_coding protein_coding MGP_CBAJ_T0079401.1 MGP_CBAJ_G0030872.1 mouse_genomes_project 6 131929467 131939545 - MGP_CBAJ_P0079401 Atp6v1e1 protein_coding protein_coding MGP_CBAJ_T0008449.1 MGP_CBAJ_G0006828.1 mouse_genomes_project 6 31750374 31879401 + Gm13849 lincRNA lincRNA MGP_CBAJ_T0015419.1 MGP_CBAJ_G0013531.1 mouse_genomes_project 6 148627017 148627923 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008630.1 MGP_CBAJ_G0006969.1 mouse_genomes_project 6 141272517 141273131 - Gm44066 lincRNA lincRNA MGP_CBAJ_T0079395.1 MGP_CBAJ_G0030871.1 mouse_genomes_project 6 131889140 131914511 + MGP_CBAJ_P0079395 Slc25a18 protein_coding protein_coding MGP_CBAJ_T0099416.1 MGP_CBAJ_G0037671.1 mouse_genomes_project 6 18085614 18085721 + Gm22828 snRNA snRNA MGP_CBAJ_T0008643.1 MGP_CBAJ_G0006977.1 mouse_genomes_project 6 148352560 148381956 + Lockd lincRNA lincRNA MGP_CBAJ_T0008644.1 MGP_CBAJ_G0006977.1 mouse_genomes_project 6 148352566 148373483 + Lockd lincRNA lincRNA MGP_CBAJ_T0008645.1 MGP_CBAJ_G0006977.1 mouse_genomes_project 6 148352566 148373717 + Lockd lincRNA lincRNA MGP_CBAJ_T0008646.1 MGP_CBAJ_G0006977.1 mouse_genomes_project 6 148352601 148373715 + Lockd lincRNA lincRNA MGP_CBAJ_T0008647.1 MGP_CBAJ_G0006977.1 mouse_genomes_project 6 148352623 148373858 + Lockd lincRNA lincRNA MGP_CBAJ_T0015294.1 MGP_CBAJ_G0013406.1 mouse_genomes_project 6 110898302 110899087 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0079796.1 MGP_CBAJ_G0030952.1 mouse_genomes_project 6 136967025 136968787 + Mrpl51 protein_coding processed_transcript MGP_CBAJ_T0079797.1 MGP_CBAJ_G0030952.1 mouse_genomes_project 6 136967389 136971507 + MGP_CBAJ_P0079797 Mrpl51 protein_coding protein_coding MGP_CBAJ_T0079798.1 MGP_CBAJ_G0030952.1 mouse_genomes_project 6 136967441 136968103 + Mrpl51 protein_coding retained_intron MGP_CBAJ_T0008593.1 MGP_CBAJ_G0006934.1 mouse_genomes_project 6 114952873 114957413 - Gm15631 lincRNA lincRNA MGP_CBAJ_T0079035.1 MGP_CBAJ_G0030809.1 mouse_genomes_project 6 125214603 125227869 - Vgll4 protein_coding processed_transcript MGP_CBAJ_T0079036.1 MGP_CBAJ_G0030809.1 mouse_genomes_project 6 125215413 125274344 - MGP_CBAJ_P0079036 Vgll4 protein_coding protein_coding MGP_CBAJ_T0079037.1 MGP_CBAJ_G0030809.1 mouse_genomes_project 6 125216181 125227782 - Vgll4 protein_coding processed_transcript MGP_CBAJ_T0079038.1 MGP_CBAJ_G0030809.1 mouse_genomes_project 6 125216181 125218735 - Vgll4 protein_coding processed_transcript MGP_CBAJ_T0079039.1 MGP_CBAJ_G0030809.1 mouse_genomes_project 6 125216311 125320939 - MGP_CBAJ_P0079039 Vgll4 protein_coding protein_coding MGP_CBAJ_T0079040.1 MGP_CBAJ_G0030809.1 mouse_genomes_project 6 125216754 125321753 - MGP_CBAJ_P0079040 Vgll4 protein_coding protein_coding MGP_CBAJ_T0079041.1 MGP_CBAJ_G0030809.1 mouse_genomes_project 6 125272576 125274339 - Vgll4 protein_coding retained_intron MGP_CBAJ_T0015157.1 MGP_CBAJ_G0013269.1 mouse_genomes_project 6 67108442 67109133 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008520.1 MGP_CBAJ_G0006878.1 mouse_genomes_project 6 75887390 75908764 + Gm43291 lincRNA lincRNA MGP_CBAJ_T0078129.1 MGP_CBAJ_G0030634.1 mouse_genomes_project 6 93369546 93456459 + MGP_CBAJ_P0078129 Tgfa protein_coding protein_coding MGP_CBAJ_T0078130.1 MGP_CBAJ_G0030634.1 mouse_genomes_project 6 93369574 93386300 + Tgfa protein_coding processed_transcript MGP_CBAJ_T0078131.1 MGP_CBAJ_G0030634.1 mouse_genomes_project 6 93369713 93452765 + MGP_CBAJ_P0078131 Tgfa protein_coding protein_coding MGP_CBAJ_T0078132.1 MGP_CBAJ_G0030634.1 mouse_genomes_project 6 93387967 93452955 + Tgfa protein_coding processed_transcript MGP_CBAJ_T0077531.1 MGP_CBAJ_G0030514.1 mouse_genomes_project 6 71850523 71934123 - MGP_CBAJ_P0077531 Il23r protein_coding protein_coding MGP_CBAJ_T0080081.1 MGP_CBAJ_G0031031.1 mouse_genomes_project 6 144160199 144169028 - MGP_CBAJ_P0080081 Magohb protein_coding protein_coding MGP_CBAJ_T0080082.1 MGP_CBAJ_G0031031.1 mouse_genomes_project 6 144160324 144161685 - Magohb protein_coding retained_intron MGP_CBAJ_T0080083.1 MGP_CBAJ_G0031031.1 mouse_genomes_project 6 144160334 144168915 - MGP_CBAJ_P0080083 Magohb protein_coding nonsense_mediated_decay MGP_CBAJ_T0080084.1 MGP_CBAJ_G0031031.1 mouse_genomes_project 6 144160416 144168058 - MGP_CBAJ_P0080084 Magohb protein_coding protein_coding MGP_CBAJ_T0080085.1 MGP_CBAJ_G0031031.1 mouse_genomes_project 6 144160476 144165459 - Magohb protein_coding retained_intron MGP_CBAJ_T0080086.1 MGP_CBAJ_G0031031.1 mouse_genomes_project 6 144160512 144168935 - MGP_CBAJ_P0080086 Magohb protein_coding nonsense_mediated_decay MGP_CBAJ_T0080087.1 MGP_CBAJ_G0031031.1 mouse_genomes_project 6 144163950 144168935 - MGP_CBAJ_P0080087 Magohb protein_coding nonsense_mediated_decay MGP_CBAJ_T0077049.1 MGP_CBAJ_G0030385.1 mouse_genomes_project 6 51070498 51074288 + MGP_CBAJ_P0077049 1600015I10Rik protein_coding protein_coding MGP_CBAJ_T0078780.1 MGP_CBAJ_G0030766.1 mouse_genomes_project 6 117768898 118111385 + MGP_CBAJ_P0078780 Itpr1 protein_coding protein_coding MGP_CBAJ_T0078781.1 MGP_CBAJ_G0030766.1 mouse_genomes_project 6 117768901 118111393 + MGP_CBAJ_P0078781 Itpr1 protein_coding unknown_likely_coding MGP_CBAJ_T0078782.1 MGP_CBAJ_G0030766.1 mouse_genomes_project 6 117769004 118111385 + MGP_CBAJ_P0078782 Itpr1 protein_coding protein_coding MGP_CBAJ_T0078783.1 MGP_CBAJ_G0030766.1 mouse_genomes_project 6 117811049 117948323 + Itpr1 protein_coding retained_intron MGP_CBAJ_T0078784.1 MGP_CBAJ_G0030766.1 mouse_genomes_project 6 117909851 117931258 + MGP_CBAJ_P0078784 Itpr1 protein_coding protein_coding MGP_CBAJ_T0078785.1 MGP_CBAJ_G0030766.1 mouse_genomes_project 6 117970566 117974312 + Itpr1 protein_coding retained_intron MGP_CBAJ_T0078786.1 MGP_CBAJ_G0030766.1 mouse_genomes_project 6 117972106 117995904 + MGP_CBAJ_P0078786 Itpr1 protein_coding protein_coding MGP_CBAJ_T0078787.1 MGP_CBAJ_G0030766.1 mouse_genomes_project 6 117972173 118033221 + MGP_CBAJ_P0078787 Itpr1 protein_coding protein_coding MGP_CBAJ_T0078788.1 MGP_CBAJ_G0030766.1 mouse_genomes_project 6 117973187 117995859 + MGP_CBAJ_P0078788 Itpr1 protein_coding protein_coding MGP_CBAJ_T0078789.1 MGP_CBAJ_G0030766.1 mouse_genomes_project 6 118016315 118030704 + Itpr1 protein_coding processed_transcript MGP_CBAJ_T0078790.1 MGP_CBAJ_G0030766.1 mouse_genomes_project 6 118065948 118070542 + Itpr1 protein_coding retained_intron MGP_CBAJ_T0078791.1 MGP_CBAJ_G0030766.1 mouse_genomes_project 6 118076344 118077286 + Itpr1 protein_coding retained_intron MGP_CBAJ_T0005036.1 MGP_CBAJ_G0004293.1 mouse_genomes_project 6 159278635 159307837 + Sox5os2 antisense antisense MGP_CBAJ_T0101987.1 MGP_CBAJ_G0040018.1 mouse_genomes_project 6 60369685 60370523 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015255.1 MGP_CBAJ_G0013367.1 mouse_genomes_project 6 92995438 92996074 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0078855.1 MGP_CBAJ_G0030780.1 mouse_genomes_project 6 123429328 123484431 + MGP_CBAJ_P0078855 Mtmr14 protein_coding protein_coding MGP_CBAJ_T0078856.1 MGP_CBAJ_G0030780.1 mouse_genomes_project 6 123429336 123473833 + MGP_CBAJ_P0078856 Mtmr14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078857.1 MGP_CBAJ_G0030780.1 mouse_genomes_project 6 123429382 123484426 + MGP_CBAJ_P0078857 Mtmr14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078858.1 MGP_CBAJ_G0030780.1 mouse_genomes_project 6 123430956 123459138 + MGP_CBAJ_P0078858 Mtmr14 protein_coding protein_coding MGP_CBAJ_T0078859.1 MGP_CBAJ_G0030780.1 mouse_genomes_project 6 123455456 123472548 + MGP_CBAJ_P0078859 Mtmr14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078860.1 MGP_CBAJ_G0030780.1 mouse_genomes_project 6 123457946 123469080 + MGP_CBAJ_P0078860 Mtmr14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078861.1 MGP_CBAJ_G0030780.1 mouse_genomes_project 6 123463657 123480974 + MGP_CBAJ_P0078861 Mtmr14 protein_coding protein_coding MGP_CBAJ_T0078862.1 MGP_CBAJ_G0030780.1 mouse_genomes_project 6 123469013 123483958 + MGP_CBAJ_P0078862 Mtmr14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078863.1 MGP_CBAJ_G0030780.1 mouse_genomes_project 6 123469044 123484235 + MGP_CBAJ_P0078863 Mtmr14 protein_coding protein_coding MGP_CBAJ_T0078864.1 MGP_CBAJ_G0030780.1 mouse_genomes_project 6 123472587 123484126 + MGP_CBAJ_P0078864 Mtmr14 protein_coding protein_coding MGP_CBAJ_T0077772.1 MGP_CBAJ_G0030567.1 mouse_genomes_project 6 88519162 88557629 + MGP_CBAJ_P0077772 Gcfc2 protein_coding protein_coding MGP_CBAJ_T0077773.1 MGP_CBAJ_G0030567.1 mouse_genomes_project 6 88519166 88556970 + MGP_CBAJ_P0077773 Gcfc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077774.1 MGP_CBAJ_G0030567.1 mouse_genomes_project 6 88519173 88539713 + Gcfc2 protein_coding retained_intron MGP_CBAJ_T0077775.1 MGP_CBAJ_G0030567.1 mouse_genomes_project 6 88526208 88526661 + Gcfc2 protein_coding retained_intron MGP_CBAJ_T0077776.1 MGP_CBAJ_G0030567.1 mouse_genomes_project 6 88528362 88529790 + Gcfc2 protein_coding retained_intron MGP_CBAJ_T0077777.1 MGP_CBAJ_G0030567.1 mouse_genomes_project 6 88536847 88539218 + Gcfc2 protein_coding retained_intron MGP_CBAJ_T0077778.1 MGP_CBAJ_G0030567.1 mouse_genomes_project 6 88541996 88555776 + MGP_CBAJ_P0077778 Gcfc2 protein_coding protein_coding MGP_CBAJ_T0077779.1 MGP_CBAJ_G0030567.1 mouse_genomes_project 6 88545159 88554667 + Gcfc2 protein_coding retained_intron MGP_CBAJ_T0015321.1 MGP_CBAJ_G0013433.1 mouse_genomes_project 6 123564562 123566897 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100697.1 MGP_CBAJ_G0038952.1 mouse_genomes_project 6 126887309 126887439 - Gm23527 snoRNA snoRNA MGP_CBAJ_T0002040.1 MGP_CBAJ_G0001956.1 mouse_genomes_project 6 97874629 97877180 + TEC TEC MGP_CBAJ_T0010685.1 MGP_CBAJ_G0008823.1 mouse_genomes_project 6 136435817 136435889 - Mir141 miRNA miRNA MGP_CBAJ_T0008600.1 MGP_CBAJ_G0006941.1 mouse_genomes_project 6 123982272 123983196 + Gm44053 lincRNA lincRNA MGP_CBAJ_T0079688.1 MGP_CBAJ_G0030937.1 mouse_genomes_project 6 136586634 136641341 - MGP_CBAJ_P0079688 Cd4 protein_coding unknown_likely_coding MGP_CBAJ_T0079689.1 MGP_CBAJ_G0030937.1 mouse_genomes_project 6 136586638 136610199 - MGP_CBAJ_P0079689 Cd4 protein_coding protein_coding MGP_CBAJ_T0079690.1 MGP_CBAJ_G0030937.1 mouse_genomes_project 6 136588612 136592261 - Cd4 protein_coding processed_transcript MGP_CBAJ_T0079691.1 MGP_CBAJ_G0030937.1 mouse_genomes_project 6 136588712 136592478 - Cd4 protein_coding processed_transcript MGP_CBAJ_T0079692.1 MGP_CBAJ_G0030937.1 mouse_genomes_project 6 136589317 136610177 - Cd4 protein_coding retained_intron MGP_CBAJ_T0079693.1 MGP_CBAJ_G0030937.1 mouse_genomes_project 6 136600718 136610178 - Cd4 protein_coding retained_intron MGP_CBAJ_T0101351.1 MGP_CBAJ_G0039433.1 mouse_genomes_project 6 141466918 141481969 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101352.1 MGP_CBAJ_G0039433.1 mouse_genomes_project 6 141467006 141481890 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0077529.1 MGP_CBAJ_G0030513.1 mouse_genomes_project 6 71699888 71756638 - MGP_CBAJ_P0077529 Il12rb2 protein_coding protein_coding MGP_CBAJ_T0077530.1 MGP_CBAJ_G0030513.1 mouse_genomes_project 6 71700586 71798129 - MGP_CBAJ_P0077530 Il12rb2 protein_coding protein_coding MGP_CBAJ_T0100668.1 MGP_CBAJ_G0038923.1 mouse_genomes_project 6 59621314 59621446 - Gm24709 snoRNA snoRNA MGP_CBAJ_T0008437.1 MGP_CBAJ_G0006820.1 mouse_genomes_project 6 31267655 31283276 + Gm14532 lincRNA lincRNA MGP_CBAJ_T0077059.1 MGP_CBAJ_G0030389.1 mouse_genomes_project 6 51229434 51245423 + MGP_CBAJ_P0077059 Malsu1 protein_coding protein_coding MGP_CBAJ_T0077060.1 MGP_CBAJ_G0030389.1 mouse_genomes_project 6 51229487 51245423 + MGP_CBAJ_P0077060 Malsu1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077061.1 MGP_CBAJ_G0030389.1 mouse_genomes_project 6 51229531 51238800 + Malsu1 protein_coding processed_transcript MGP_CBAJ_T0077062.1 MGP_CBAJ_G0030389.1 mouse_genomes_project 6 51229713 51242206 + Malsu1 protein_coding processed_transcript MGP_CBAJ_T0077063.1 MGP_CBAJ_G0030389.1 mouse_genomes_project 6 51241256 51243350 + Malsu1 protein_coding retained_intron MGP_CBAJ_T0078332.1 MGP_CBAJ_G0030673.1 mouse_genomes_project 6 95835728 95869978 + MGP_CBAJ_P0078332 Ruvbl1 protein_coding protein_coding MGP_CBAJ_T0078333.1 MGP_CBAJ_G0030673.1 mouse_genomes_project 6 95836046 95853527 + MGP_CBAJ_P0078333 Ruvbl1 protein_coding protein_coding MGP_CBAJ_T0077805.1 MGP_CBAJ_G0030575.1 mouse_genomes_project 6 89726403 89728941 - MGP_CBAJ_P0077805 Dok1 protein_coding protein_coding MGP_CBAJ_T0077806.1 MGP_CBAJ_G0030575.1 mouse_genomes_project 6 89726409 89728938 - MGP_CBAJ_P0077806 Dok1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077807.1 MGP_CBAJ_G0030575.1 mouse_genomes_project 6 89727320 89728031 - MGP_CBAJ_P0077807 Dok1 protein_coding protein_coding MGP_CBAJ_T0076091.1 MGP_CBAJ_G0030161.1 mouse_genomes_project 6 22149780 22153093 - MGP_CBAJ_P0076091 Fezf1 protein_coding protein_coding MGP_CBAJ_T0015310.1 MGP_CBAJ_G0013422.1 mouse_genomes_project 6 119057535 119057983 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0080127.1 MGP_CBAJ_G0031062.1 mouse_genomes_project 6 146216319 146219793 + MGP_CBAJ_P0080127 Smim10l1 protein_coding protein_coding MGP_CBAJ_T0080128.1 MGP_CBAJ_G0031062.1 mouse_genomes_project 6 146216675 146225452 + MGP_CBAJ_P0080128 Smim10l1 protein_coding protein_coding MGP_CBAJ_T0080129.1 MGP_CBAJ_G0031062.1 mouse_genomes_project 6 146216709 146225454 + MGP_CBAJ_P0080129 Smim10l1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0008623.1 MGP_CBAJ_G0006962.1 mouse_genomes_project 6 139311419 139316974 - lincRNA lincRNA MGP_CBAJ_T0001872.1 MGP_CBAJ_G0001788.1 mouse_genomes_project 6 1433104 1435916 - TEC TEC MGP_CBAJ_T0010683.1 MGP_CBAJ_G0008821.1 mouse_genomes_project 6 132512093 132512172 - Gm24855 miRNA miRNA MGP_CBAJ_T0080062.1 MGP_CBAJ_G0031021.1 mouse_genomes_project 6 142291066 142303456 - MGP_CBAJ_P0080062 Klri2 protein_coding protein_coding MGP_CBAJ_T0079539.1 MGP_CBAJ_G0030903.1 mouse_genomes_project 6 134775388 134797657 + MGP_CBAJ_P0079539 Clec4n protein_coding protein_coding MGP_CBAJ_T0079540.1 MGP_CBAJ_G0030903.1 mouse_genomes_project 6 134775399 134797655 + MGP_CBAJ_P0079540 Clec4n protein_coding protein_coding MGP_CBAJ_T0079541.1 MGP_CBAJ_G0030903.1 mouse_genomes_project 6 134775402 134776375 + Clec4n protein_coding processed_transcript MGP_CBAJ_T0079542.1 MGP_CBAJ_G0030903.1 mouse_genomes_project 6 134775402 134797655 + MGP_CBAJ_P0079542 Clec4n protein_coding nonsense_mediated_decay MGP_CBAJ_T0079543.1 MGP_CBAJ_G0030903.1 mouse_genomes_project 6 134775402 134797655 + MGP_CBAJ_P0079543 Clec4n protein_coding protein_coding MGP_CBAJ_T0079544.1 MGP_CBAJ_G0030903.1 mouse_genomes_project 6 134775563 134797221 + MGP_CBAJ_P0079544 Clec4n protein_coding protein_coding MGP_CBAJ_T0077921.1 MGP_CBAJ_G0030596.1 mouse_genomes_project 6 90079407 90088546 + MGP_CBAJ_P0077921 Bola3 protein_coding protein_coding MGP_CBAJ_T0077922.1 MGP_CBAJ_G0030596.1 mouse_genomes_project 6 90079476 90088521 + MGP_CBAJ_P0077922 Bola3 protein_coding protein_coding MGP_CBAJ_T0077923.1 MGP_CBAJ_G0030596.1 mouse_genomes_project 6 90079706 90090286 + MGP_CBAJ_P0077923 Bola3 protein_coding protein_coding MGP_CBAJ_T0077924.1 MGP_CBAJ_G0030596.1 mouse_genomes_project 6 90079751 90080661 + Bola3 protein_coding processed_transcript MGP_CBAJ_T0077925.1 MGP_CBAJ_G0030596.1 mouse_genomes_project 6 90079780 90083458 + Bola3 protein_coding retained_intron MGP_CBAJ_T0077926.1 MGP_CBAJ_G0030596.1 mouse_genomes_project 6 90081300 90083469 + Bola3 protein_coding retained_intron MGP_CBAJ_T0077927.1 MGP_CBAJ_G0030596.1 mouse_genomes_project 6 90081300 90088566 + Bola3 protein_coding retained_intron MGP_CBAJ_T0077928.1 MGP_CBAJ_G0030596.1 mouse_genomes_project 6 90082355 90088483 + Bola3 protein_coding processed_transcript MGP_CBAJ_T0077929.1 MGP_CBAJ_G0030596.1 mouse_genomes_project 6 90083573 90089397 + Bola3 protein_coding processed_transcript MGP_CBAJ_T0076866.1 MGP_CBAJ_G0030347.1 mouse_genomes_project 6 44642202 44665917 + MGP_CBAJ_P0076866 Arhgef5 protein_coding protein_coding MGP_CBAJ_T0076867.1 MGP_CBAJ_G0030347.1 mouse_genomes_project 6 44651107 44665916 + MGP_CBAJ_P0076867 Arhgef5 protein_coding protein_coding MGP_CBAJ_T0076868.1 MGP_CBAJ_G0030347.1 mouse_genomes_project 6 44653534 44656517 + Arhgef5 protein_coding retained_intron MGP_CBAJ_T0076869.1 MGP_CBAJ_G0030347.1 mouse_genomes_project 6 44653643 44663792 + Arhgef5 protein_coding retained_intron MGP_CBAJ_T0076870.1 MGP_CBAJ_G0030347.1 mouse_genomes_project 6 44656053 44665913 + Arhgef5 protein_coding retained_intron MGP_CBAJ_T0076871.1 MGP_CBAJ_G0030347.1 mouse_genomes_project 6 44657586 44660163 + Arhgef5 protein_coding retained_intron MGP_CBAJ_T0076872.1 MGP_CBAJ_G0030347.1 mouse_genomes_project 6 44659210 44665912 + Arhgef5 protein_coding retained_intron MGP_CBAJ_T0076873.1 MGP_CBAJ_G0030347.1 mouse_genomes_project 6 44659478 44660612 + Arhgef5 protein_coding retained_intron MGP_CBAJ_T0004960.1 MGP_CBAJ_G0004231.1 mouse_genomes_project 6 103129119 103132703 - Kbtbd8os antisense antisense MGP_CBAJ_T0008659.1 MGP_CBAJ_G0006987.1 mouse_genomes_project 6 157765854 157822201 - Gm31108 lincRNA lincRNA MGP_CBAJ_T0077639.1 MGP_CBAJ_G0030538.1 mouse_genomes_project 6 77823576 77856922 - MGP_CBAJ_P0077639 Usp39 protein_coding protein_coding MGP_CBAJ_T0077640.1 MGP_CBAJ_G0030538.1 mouse_genomes_project 6 77826198 77842049 - Usp39 protein_coding retained_intron MGP_CBAJ_T0077641.1 MGP_CBAJ_G0030538.1 mouse_genomes_project 6 77844938 77854862 - MGP_CBAJ_P0077641 Usp39 protein_coding nonsense_mediated_decay MGP_CBAJ_T0011499.1 MGP_CBAJ_G0009637.1 mouse_genomes_project 6 15920949 15921128 + Gm27365 misc_RNA misc_RNA MGP_CBAJ_T0099425.1 MGP_CBAJ_G0037680.1 mouse_genomes_project 6 40074488 40074587 - Gm26008 snRNA snRNA MGP_CBAJ_T0015054.1 MGP_CBAJ_G0013166.1 mouse_genomes_project 6 21463563 21464339 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000288.1 MGP_CBAJ_G0000233.1 mouse_genomes_project 6 74100588 74101051 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0008628.1 MGP_CBAJ_G0006967.1 mouse_genomes_project 6 140378741 140399377 - lincRNA lincRNA MGP_CBAJ_T0078197.1 MGP_CBAJ_G0030646.1 mouse_genomes_project 6 93986616 94021315 - MGP_CBAJ_P0078197 Anxa4 protein_coding protein_coding MGP_CBAJ_T0078198.1 MGP_CBAJ_G0030646.1 mouse_genomes_project 6 93986617 94059440 - MGP_CBAJ_P0078198 Anxa4 protein_coding protein_coding MGP_CBAJ_T0078199.1 MGP_CBAJ_G0030646.1 mouse_genomes_project 6 93986623 94021229 - MGP_CBAJ_P0078199 Anxa4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078200.1 MGP_CBAJ_G0030646.1 mouse_genomes_project 6 93987431 93994937 - Anxa4 protein_coding retained_intron MGP_CBAJ_T0078201.1 MGP_CBAJ_G0030646.1 mouse_genomes_project 6 93987502 94016117 - MGP_CBAJ_P0078201 Anxa4 protein_coding protein_coding MGP_CBAJ_T0078202.1 MGP_CBAJ_G0030646.1 mouse_genomes_project 6 93991737 94021212 - MGP_CBAJ_P0078202 Anxa4 protein_coding protein_coding MGP_CBAJ_T0078203.1 MGP_CBAJ_G0030646.1 mouse_genomes_project 6 93991744 94059420 - MGP_CBAJ_P0078203 Anxa4 protein_coding protein_coding MGP_CBAJ_T0078204.1 MGP_CBAJ_G0030646.1 mouse_genomes_project 6 93992969 94059420 - MGP_CBAJ_P0078204 Anxa4 protein_coding protein_coding MGP_CBAJ_T0078205.1 MGP_CBAJ_G0030646.1 mouse_genomes_project 6 94002987 94021315 - Anxa4 protein_coding retained_intron MGP_CBAJ_T0078939.1 MGP_CBAJ_G0030792.1 mouse_genomes_project 6 123691361 123703050 + MGP_CBAJ_P0078939 Il17rc protein_coding protein_coding MGP_CBAJ_T0078940.1 MGP_CBAJ_G0030792.1 mouse_genomes_project 6 123692217 123696345 + MGP_CBAJ_P0078940 Il17rc protein_coding protein_coding MGP_CBAJ_T0078941.1 MGP_CBAJ_G0030792.1 mouse_genomes_project 6 123692728 123703050 + MGP_CBAJ_P0078941 Il17rc protein_coding protein_coding MGP_CBAJ_T0078942.1 MGP_CBAJ_G0030792.1 mouse_genomes_project 6 123694161 123696651 + MGP_CBAJ_P0078942 Il17rc protein_coding protein_coding MGP_CBAJ_T0078943.1 MGP_CBAJ_G0030792.1 mouse_genomes_project 6 123696494 123699208 + Il17rc protein_coding retained_intron MGP_CBAJ_T0079455.1 MGP_CBAJ_G0030882.1 mouse_genomes_project 6 132856139 132859149 + MGP_CBAJ_P0079455 A2m protein_coding protein_coding MGP_CBAJ_T0079456.1 MGP_CBAJ_G0030882.1 mouse_genomes_project 6 132856991 132899046 + MGP_CBAJ_P0079456 A2m protein_coding protein_coding MGP_CBAJ_T0079457.1 MGP_CBAJ_G0030882.1 mouse_genomes_project 6 132878645 132881224 + A2m protein_coding retained_intron MGP_CBAJ_T0008554.1 MGP_CBAJ_G0006906.1 mouse_genomes_project 6 93983238 93986842 + Gm44036 lincRNA lincRNA MGP_CBAJ_T0015215.1 MGP_CBAJ_G0013327.1 mouse_genomes_project 6 77042660 77043226 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008672.1 MGP_CBAJ_G0006996.1 mouse_genomes_project 6 162256241 162298464 + E330012B07Rik lincRNA lincRNA MGP_CBAJ_T0008673.1 MGP_CBAJ_G0006996.1 mouse_genomes_project 6 162256259 162284481 + E330012B07Rik lincRNA lincRNA MGP_CBAJ_T0079886.1 MGP_CBAJ_G0030973.1 mouse_genomes_project 6 139042264 139057722 + MGP_CBAJ_P0079886 Fgf6 protein_coding protein_coding MGP_CBAJ_T0076231.1 MGP_CBAJ_G0030196.1 mouse_genomes_project 6 29016874 29020015 + Ccdc136 protein_coding processed_transcript MGP_CBAJ_T0076232.1 MGP_CBAJ_G0030196.1 mouse_genomes_project 6 29017195 29051362 + MGP_CBAJ_P0076232 Ccdc136 protein_coding protein_coding MGP_CBAJ_T0076233.1 MGP_CBAJ_G0030196.1 mouse_genomes_project 6 29017208 29051357 + MGP_CBAJ_P0076233 Ccdc136 protein_coding protein_coding MGP_CBAJ_T0076234.1 MGP_CBAJ_G0030196.1 mouse_genomes_project 6 29017250 29046501 + MGP_CBAJ_P0076234 Ccdc136 protein_coding unknown_likely_coding MGP_CBAJ_T0076235.1 MGP_CBAJ_G0030196.1 mouse_genomes_project 6 29017250 29051403 + MGP_CBAJ_P0076235 Ccdc136 protein_coding protein_coding MGP_CBAJ_T0076236.1 MGP_CBAJ_G0030196.1 mouse_genomes_project 6 29019491 29051364 + MGP_CBAJ_P0076236 Ccdc136 protein_coding protein_coding MGP_CBAJ_T0076237.1 MGP_CBAJ_G0030196.1 mouse_genomes_project 6 29019491 29051357 + MGP_CBAJ_P0076237 Ccdc136 protein_coding protein_coding MGP_CBAJ_T0076238.1 MGP_CBAJ_G0030196.1 mouse_genomes_project 6 29027287 29051266 + MGP_CBAJ_P0076238 Ccdc136 protein_coding protein_coding MGP_CBAJ_T0076239.1 MGP_CBAJ_G0030196.1 mouse_genomes_project 6 29034513 29051397 + MGP_CBAJ_P0076239 Ccdc136 protein_coding protein_coding MGP_CBAJ_T0076240.1 MGP_CBAJ_G0030196.1 mouse_genomes_project 6 29036892 29051361 + Ccdc136 protein_coding processed_transcript MGP_CBAJ_T0076241.1 MGP_CBAJ_G0030196.1 mouse_genomes_project 6 29039360 29051363 + Ccdc136 protein_coding processed_transcript MGP_CBAJ_T0015041.1 MGP_CBAJ_G0013153.1 mouse_genomes_project 6 15940275 15941531 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0077150.1 MGP_CBAJ_G0030406.1 mouse_genomes_project 6 54724331 54727062 - MGP_CBAJ_P0077150 Hoxa1 protein_coding protein_coding MGP_CBAJ_T0077151.1 MGP_CBAJ_G0030406.1 mouse_genomes_project 6 54724336 54727062 - MGP_CBAJ_P0077151 Hoxa1 protein_coding protein_coding MGP_CBAJ_T0099412.1 MGP_CBAJ_G0037667.1 mouse_genomes_project 6 4074004 4074166 - Gm22155 snRNA snRNA MGP_CBAJ_T0005021.1 MGP_CBAJ_G0004280.1 mouse_genomes_project 6 148138809 148139760 + Gm44025 antisense antisense MGP_CBAJ_T0010674.1 MGP_CBAJ_G0008812.1 mouse_genomes_project 6 123754053 123754178 - Gm23365 miRNA miRNA MGP_CBAJ_T0002101.1 MGP_CBAJ_G0002016.1 mouse_genomes_project 6 136435550 136435848 - TEC TEC MGP_CBAJ_T0000271.1 MGP_CBAJ_G0000216.1 mouse_genomes_project 6 72969430 72969901 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0004948.1 MGP_CBAJ_G0004224.1 mouse_genomes_project 6 96216500 96220914 + Gm15612 antisense antisense MGP_CBAJ_T0005542.1 MGP_CBAJ_G0004662.1 mouse_genomes_project 6 94123285 94124327 - 2610306M01Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_CBAJ_T0076723.1 MGP_CBAJ_G0030283.1 mouse_genomes_project 6 41521447 41522520 + MGP_CBAJ_P0076723 Tas2r137 protein_coding protein_coding MGP_CBAJ_T0015035.1 MGP_CBAJ_G0013147.1 mouse_genomes_project 6 12236113 12236684 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015071.1 MGP_CBAJ_G0013183.1 mouse_genomes_project 6 33452471 33454740 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011501.1 MGP_CBAJ_G0009639.1 mouse_genomes_project 6 15928849 15929035 + Gm28008 misc_RNA misc_RNA MGP_CBAJ_T0099457.1 MGP_CBAJ_G0037712.1 mouse_genomes_project 6 131611636 131611738 + Gm24391 snRNA snRNA MGP_CBAJ_T0015148.1 MGP_CBAJ_G0013260.1 mouse_genomes_project 6 64116464 64116646 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0077328.1 MGP_CBAJ_G0030449.1 mouse_genomes_project 6 59878485 59898699 - MGP_CBAJ_P0077328 Kbtbd2 protein_coding protein_coding MGP_CBAJ_T0077329.1 MGP_CBAJ_G0030449.1 mouse_genomes_project 6 59878486 59898776 - MGP_CBAJ_P0077329 Kbtbd2 protein_coding protein_coding MGP_CBAJ_T0077330.1 MGP_CBAJ_G0030449.1 mouse_genomes_project 6 59890339 59898242 - MGP_CBAJ_P0077330 Kbtbd2 protein_coding protein_coding MGP_CBAJ_T0077331.1 MGP_CBAJ_G0030449.1 mouse_genomes_project 6 59890484 59897709 - Kbtbd2 protein_coding processed_transcript MGP_CBAJ_T0077723.1 MGP_CBAJ_G0030554.1 mouse_genomes_project 6 78657788 78862279 - MGP_CBAJ_P0077723 Dnah6 protein_coding protein_coding MGP_CBAJ_T0077724.1 MGP_CBAJ_G0030554.1 mouse_genomes_project 6 78657791 78862299 - MGP_CBAJ_P0077724 Dnah6 protein_coding protein_coding MGP_CBAJ_T0077725.1 MGP_CBAJ_G0030554.1 mouse_genomes_project 6 78657924 78860431 - MGP_CBAJ_P0077725 Dnah6 protein_coding protein_coding MGP_CBAJ_T0077726.1 MGP_CBAJ_G0030554.1 mouse_genomes_project 6 78729531 78781853 - Dnah6 protein_coding retained_intron MGP_CBAJ_T0015447.1 MGP_CBAJ_G0013559.1 mouse_genomes_project 6 164378496 164379431 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000299.1 MGP_CBAJ_G0000244.1 mouse_genomes_project 6 75254115 75254349 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0077363.1 MGP_CBAJ_G0030468.1 mouse_genomes_project 6 60835107 60915183 + MGP_CBAJ_P0077363 Herc6 protein_coding protein_coding MGP_CBAJ_T0077364.1 MGP_CBAJ_G0030468.1 mouse_genomes_project 6 60835115 60838867 + MGP_CBAJ_P0077364 Herc6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077365.1 MGP_CBAJ_G0030468.1 mouse_genomes_project 6 60858465 60890784 + Herc6 protein_coding retained_intron MGP_CBAJ_T0077366.1 MGP_CBAJ_G0030468.1 mouse_genomes_project 6 60860903 60865240 + Herc6 protein_coding retained_intron MGP_CBAJ_T0077367.1 MGP_CBAJ_G0030468.1 mouse_genomes_project 6 60861784 60871016 + Herc6 protein_coding retained_intron MGP_CBAJ_T0077368.1 MGP_CBAJ_G0030468.1 mouse_genomes_project 6 60865177 60872273 + Herc6 protein_coding retained_intron MGP_CBAJ_T0079066.1 MGP_CBAJ_G0030815.1 mouse_genomes_project 6 125940705 125950167 + MGP_CBAJ_P0079066 Tsen2 protein_coding protein_coding MGP_CBAJ_T0079067.1 MGP_CBAJ_G0030815.1 mouse_genomes_project 6 125940705 125974380 + MGP_CBAJ_P0079067 Tsen2 protein_coding protein_coding MGP_CBAJ_T0079068.1 MGP_CBAJ_G0030815.1 mouse_genomes_project 6 125940743 125955559 + Tsen2 protein_coding processed_transcript MGP_CBAJ_T0079069.1 MGP_CBAJ_G0030815.1 mouse_genomes_project 6 125940747 125948246 + Tsen2 protein_coding retained_intron MGP_CBAJ_T0079070.1 MGP_CBAJ_G0030815.1 mouse_genomes_project 6 125970190 125973732 + Tsen2 protein_coding retained_intron MGP_CBAJ_T0079851.1 MGP_CBAJ_G0030965.1 mouse_genomes_project 6 138492726 138495588 - MGP_CBAJ_P0079851 Kcna5 protein_coding protein_coding MGP_CBAJ_T0008388.1 MGP_CBAJ_G0006790.1 mouse_genomes_project 6 3364219 3407375 + Gm20619 lincRNA lincRNA MGP_CBAJ_T0008389.1 MGP_CBAJ_G0006790.1 mouse_genomes_project 6 3364247 3500104 + Gm20619 lincRNA lincRNA MGP_CBAJ_T0008390.1 MGP_CBAJ_G0006790.1 mouse_genomes_project 6 3364250 3516501 + Gm20619 lincRNA lincRNA MGP_CBAJ_T0008391.1 MGP_CBAJ_G0006790.1 mouse_genomes_project 6 3364278 3407371 + Gm20619 lincRNA lincRNA MGP_CBAJ_T0008392.1 MGP_CBAJ_G0006790.1 mouse_genomes_project 6 3428220 3499899 + Gm20619 lincRNA lincRNA MGP_CBAJ_T0101341.1 MGP_CBAJ_G0039427.1 mouse_genomes_project 6 60942190 60942407 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0015359.1 MGP_CBAJ_G0013471.1 mouse_genomes_project 6 134649947 134650098 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015301.1 MGP_CBAJ_G0013413.1 mouse_genomes_project 6 114276578 114278483 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001936.1 MGP_CBAJ_G0001852.1 mouse_genomes_project 6 47699830 47703768 + TEC TEC MGP_CBAJ_T0004890.1 MGP_CBAJ_G0004191.1 mouse_genomes_project 6 71582535 71641904 - antisense antisense MGP_CBAJ_T0080065.1 MGP_CBAJ_G0031023.1 mouse_genomes_project 6 142401994 142433468 - MGP_CBAJ_P0080065 Klra17 protein_coding protein_coding MGP_CBAJ_T0080066.1 MGP_CBAJ_G0031023.1 mouse_genomes_project 6 142402004 142433470 - MGP_CBAJ_P0080066 Klra17 protein_coding protein_coding MGP_CBAJ_T0008491.1 MGP_CBAJ_G0006856.1 mouse_genomes_project 6 53847764 53862737 + Gm6559 lincRNA lincRNA MGP_CBAJ_T0002532.1 MGP_CBAJ_G0002435.1 mouse_genomes_project 6 42772655 42772704 + MGP_CBAJ_P0002532 Trbj2-5 TR_J_gene TR_J_gene MGP_CBAJ_T0000171.1 MGP_CBAJ_G0000129.1 mouse_genomes_project 6 73550857 73551319 - MGP_CBAJ_P0000171 Igkv12-89 IG_V_gene IG_V_gene MGP_CBAJ_T0000172.1 MGP_CBAJ_G0000129.1 mouse_genomes_project 6 73550857 73551319 - MGP_CBAJ_P0000172 Igkv12-89 IG_V_gene IG_V_gene MGP_CBAJ_T0004839.1 MGP_CBAJ_G0004151.1 mouse_genomes_project 6 30574145 30575041 - Gm44296 antisense antisense MGP_CBAJ_T0079229.1 MGP_CBAJ_G0030845.1 mouse_genomes_project 6 128804475 128828510 + MGP_CBAJ_P0079229 Rasgef1a protein_coding protein_coding MGP_CBAJ_T0079230.1 MGP_CBAJ_G0030845.1 mouse_genomes_project 6 128804475 128828581 + MGP_CBAJ_P0079230 Rasgef1a protein_coding protein_coding MGP_CBAJ_T0079231.1 MGP_CBAJ_G0030845.1 mouse_genomes_project 6 128815910 128829561 + MGP_CBAJ_P0079231 Rasgef1a protein_coding unknown_likely_coding MGP_CBAJ_T0076848.1 MGP_CBAJ_G0030335.1 mouse_genomes_project 6 44086636 44090526 + MGP_CBAJ_P0076848 Olfr449 protein_coding protein_coding MGP_CBAJ_T0076849.1 MGP_CBAJ_G0030335.1 mouse_genomes_project 6 44086636 44090712 + MGP_CBAJ_P0076849 Olfr449 protein_coding protein_coding MGP_CBAJ_T0076850.1 MGP_CBAJ_G0030335.1 mouse_genomes_project 6 44086684 44090192 + MGP_CBAJ_P0076850 Olfr449 protein_coding protein_coding MGP_CBAJ_T0076851.1 MGP_CBAJ_G0030335.1 mouse_genomes_project 6 44090103 44091140 + MGP_CBAJ_P0076851 Olfr449 protein_coding protein_coding MGP_CBAJ_T0099447.1 MGP_CBAJ_G0037702.1 mouse_genomes_project 6 105993504 105993593 + Gm24565 snRNA snRNA MGP_CBAJ_T0076456.1 MGP_CBAJ_G0030231.1 mouse_genomes_project 6 34524347 34538538 + MGP_CBAJ_P0076456 Akr1b8 protein_coding protein_coding MGP_CBAJ_T0076457.1 MGP_CBAJ_G0030231.1 mouse_genomes_project 6 34526343 34535314 + Akr1b8 protein_coding processed_transcript MGP_CBAJ_T0077634.1 MGP_CBAJ_G0030537.1 mouse_genomes_project 6 77804726 77816747 + MGP_CBAJ_P0077634 Sftpb protein_coding protein_coding MGP_CBAJ_T0077635.1 MGP_CBAJ_G0030537.1 mouse_genomes_project 6 77804736 77816743 + MGP_CBAJ_P0077635 Sftpb protein_coding nonsense_mediated_decay MGP_CBAJ_T0077636.1 MGP_CBAJ_G0030537.1 mouse_genomes_project 6 77804741 77815344 + MGP_CBAJ_P0077636 Sftpb protein_coding nonsense_mediated_decay MGP_CBAJ_T0077637.1 MGP_CBAJ_G0030537.1 mouse_genomes_project 6 77804741 77815344 + MGP_CBAJ_P0077637 Sftpb protein_coding protein_coding MGP_CBAJ_T0077638.1 MGP_CBAJ_G0030537.1 mouse_genomes_project 6 77806206 77816457 + Sftpb protein_coding retained_intron MGP_CBAJ_T0010668.1 MGP_CBAJ_G0008806.1 mouse_genomes_project 6 107966011 107966123 - Gm22328 miRNA miRNA MGP_CBAJ_T0002630.1 MGP_CBAJ_G0002516.1 mouse_genomes_project 6 42340103 42340557 + MGP_CBAJ_P0002630 Trbv23 TR_V_gene TR_V_gene MGP_CBAJ_T0002631.1 MGP_CBAJ_G0002516.1 mouse_genomes_project 6 42340103 42340557 + MGP_CBAJ_P0002631 Trbv23 TR_V_gene TR_V_gene MGP_CBAJ_T0079382.1 MGP_CBAJ_G0030868.1 mouse_genomes_project 6 131561130 131565999 - MGP_CBAJ_P0079382 Cecr6 protein_coding protein_coding MGP_CBAJ_T0001894.1 MGP_CBAJ_G0001810.1 mouse_genomes_project 6 20383262 20389210 + TEC TEC MGP_CBAJ_T0076774.1 MGP_CBAJ_G0030309.1 mouse_genomes_project 6 43102204 43115957 + MGP_CBAJ_P0076774 Sval2 protein_coding protein_coding MGP_CBAJ_T0076775.1 MGP_CBAJ_G0030309.1 mouse_genomes_project 6 43111782 43115916 + MGP_CBAJ_P0076775 Sval2 protein_coding protein_coding MGP_CBAJ_T0076776.1 MGP_CBAJ_G0030309.1 mouse_genomes_project 6 43113335 43115916 + MGP_CBAJ_P0076776 Sval2 protein_coding protein_coding MGP_CBAJ_T0076777.1 MGP_CBAJ_G0030309.1 mouse_genomes_project 6 43114883 43115833 + Sval2 protein_coding retained_intron MGP_CBAJ_T0010695.1 MGP_CBAJ_G0008833.1 mouse_genomes_project 6 149275141 149275246 + Gm22892 miRNA miRNA MGP_CBAJ_T0102042.1 MGP_CBAJ_G0040072.1 mouse_genomes_project 6 146202090 146203492 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0079979.1 MGP_CBAJ_G0030996.1 mouse_genomes_project 6 141003015 141020550 + MGP_CBAJ_P0079979 Clec2h protein_coding protein_coding MGP_CBAJ_T0079980.1 MGP_CBAJ_G0030996.1 mouse_genomes_project 6 141003016 141018156 + MGP_CBAJ_P0079980 Clec2h protein_coding nonsense_mediated_decay MGP_CBAJ_T0079981.1 MGP_CBAJ_G0030996.1 mouse_genomes_project 6 141003017 141017947 + MGP_CBAJ_P0079981 Clec2h protein_coding protein_coding MGP_CBAJ_T0079982.1 MGP_CBAJ_G0030996.1 mouse_genomes_project 6 141003021 141018149 + Clec2h protein_coding retained_intron MGP_CBAJ_T0076444.1 MGP_CBAJ_G0030228.1 mouse_genomes_project 6 34162643 34284792 + MGP_CBAJ_P0076444 Lrguk protein_coding protein_coding MGP_CBAJ_T0076445.1 MGP_CBAJ_G0030228.1 mouse_genomes_project 6 34162645 34188782 + MGP_CBAJ_P0076445 Lrguk protein_coding protein_coding MGP_CBAJ_T0076446.1 MGP_CBAJ_G0030228.1 mouse_genomes_project 6 34172503 34188797 + MGP_CBAJ_P0076446 Lrguk protein_coding protein_coding MGP_CBAJ_T0008557.1 MGP_CBAJ_G0006909.1 mouse_genomes_project 6 95076672 95078010 + Gm43904 lincRNA lincRNA MGP_CBAJ_T0008475.1 MGP_CBAJ_G0006843.1 mouse_genomes_project 6 49462751 49467794 + Gm26625 lincRNA lincRNA MGP_CBAJ_T0079298.1 MGP_CBAJ_G0030857.1 mouse_genomes_project 6 130321295 130452143 - MGP_CBAJ_P0079298 Wnt5b protein_coding protein_coding MGP_CBAJ_T0079299.1 MGP_CBAJ_G0030857.1 mouse_genomes_project 6 130322159 130339008 - MGP_CBAJ_P0079299 Wnt5b protein_coding protein_coding MGP_CBAJ_T0079431.1 MGP_CBAJ_G0030877.1 mouse_genomes_project 6 132386484 132402467 + MGP_CBAJ_P0079431 Tuba8 protein_coding protein_coding MGP_CBAJ_T0100648.1 MGP_CBAJ_G0038903.1 mouse_genomes_project 6 5738636 5738757 - Gm26075 snoRNA snoRNA MGP_CBAJ_T0077607.1 MGP_CBAJ_G0030533.1 mouse_genomes_project 6 77273039 77276718 - Ptcd3 protein_coding retained_intron MGP_CBAJ_T0077608.1 MGP_CBAJ_G0030533.1 mouse_genomes_project 6 77273041 77302425 - MGP_CBAJ_P0077608 Ptcd3 protein_coding protein_coding MGP_CBAJ_T0077609.1 MGP_CBAJ_G0030533.1 mouse_genomes_project 6 77273042 77302425 - MGP_CBAJ_P0077609 Ptcd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077610.1 MGP_CBAJ_G0030533.1 mouse_genomes_project 6 77273044 77283854 - Ptcd3 protein_coding retained_intron MGP_CBAJ_T0077611.1 MGP_CBAJ_G0030533.1 mouse_genomes_project 6 77279299 77283779 - Ptcd3 protein_coding retained_intron MGP_CBAJ_T0077612.1 MGP_CBAJ_G0030533.1 mouse_genomes_project 6 77281434 77302419 - Ptcd3 protein_coding retained_intron MGP_CBAJ_T0077613.1 MGP_CBAJ_G0030533.1 mouse_genomes_project 6 77282791 77290878 - MGP_CBAJ_P0077613 Ptcd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077614.1 MGP_CBAJ_G0030533.1 mouse_genomes_project 6 77289156 77292170 - Ptcd3 protein_coding retained_intron MGP_CBAJ_T0077615.1 MGP_CBAJ_G0030533.1 mouse_genomes_project 6 77292126 77302393 - MGP_CBAJ_P0077615 Ptcd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077616.1 MGP_CBAJ_G0030533.1 mouse_genomes_project 6 77296353 77297139 - Ptcd3 protein_coding retained_intron MGP_CBAJ_T0077233.1 MGP_CBAJ_G0030427.1 mouse_genomes_project 6 57120161 57122240 + Prr15 protein_coding retained_intron MGP_CBAJ_T0077234.1 MGP_CBAJ_G0030427.1 mouse_genomes_project 6 57121209 57124587 + MGP_CBAJ_P0077234 Prr15 protein_coding protein_coding MGP_CBAJ_T0000281.1 MGP_CBAJ_G0000226.1 mouse_genomes_project 6 73583274 73583670 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0002012.1 MGP_CBAJ_G0001928.1 mouse_genomes_project 6 93720461 93722199 + TEC TEC MGP_CBAJ_T0101980.1 MGP_CBAJ_G0040011.1 mouse_genomes_project 6 43691290 43691432 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0080072.1 MGP_CBAJ_G0031026.1 mouse_genomes_project 6 142992170 143008844 - MGP_CBAJ_P0080072 protein_coding protein_coding MGP_CBAJ_T0080075.1 MGP_CBAJ_G0031026.1 mouse_genomes_project 6 142992274 143008772 - MGP_CBAJ_P0080075 protein_coding protein_coding MGP_CBAJ_T0008446.1 MGP_CBAJ_G0006826.1 mouse_genomes_project 6 31597634 31601546 - lincRNA lincRNA MGP_CBAJ_T0075748.1 MGP_CBAJ_G0030097.1 mouse_genomes_project 6 744868 751528 - MGP_CBAJ_P0075748 Tfpi2 protein_coding protein_coding MGP_CBAJ_T0075749.1 MGP_CBAJ_G0030097.1 mouse_genomes_project 6 747032 773454 - MGP_CBAJ_P0075749 Tfpi2 protein_coding protein_coding MGP_CBAJ_T0079060.1 MGP_CBAJ_G0030814.1 mouse_genomes_project 6 125735532 125824690 + MGP_CBAJ_P0079060 Pparg protein_coding protein_coding MGP_CBAJ_T0079061.1 MGP_CBAJ_G0030814.1 mouse_genomes_project 6 125735533 125760970 + Pparg protein_coding retained_intron MGP_CBAJ_T0079062.1 MGP_CBAJ_G0030814.1 mouse_genomes_project 6 125760847 125846303 + MGP_CBAJ_P0079062 Pparg protein_coding protein_coding MGP_CBAJ_T0079063.1 MGP_CBAJ_G0030814.1 mouse_genomes_project 6 125803801 125879183 + MGP_CBAJ_P0079063 Pparg protein_coding protein_coding MGP_CBAJ_T0079064.1 MGP_CBAJ_G0030814.1 mouse_genomes_project 6 125817621 125878979 + MGP_CBAJ_P0079064 Pparg protein_coding protein_coding MGP_CBAJ_T0079065.1 MGP_CBAJ_G0030814.1 mouse_genomes_project 6 125823113 125846679 + Pparg protein_coding retained_intron MGP_CBAJ_T0000180.1 MGP_CBAJ_G0000135.1 mouse_genomes_project 6 74627359 74627925 - MGP_CBAJ_P0000180 Igkv5-48 IG_V_gene IG_V_gene MGP_CBAJ_T0001916.1 MGP_CBAJ_G0001832.1 mouse_genomes_project 6 41002099 41003813 + TEC TEC MGP_CBAJ_T0102013.1 MGP_CBAJ_G0040044.1 mouse_genomes_project 6 97321802 97322744 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0004982.1 MGP_CBAJ_G0004245.1 mouse_genomes_project 6 123883604 123884557 - Gm43964 antisense antisense MGP_CBAJ_T0100659.1 MGP_CBAJ_G0038914.1 mouse_genomes_project 6 40271922 40272053 - Gm25402 snoRNA snoRNA MGP_CBAJ_T0015425.1 MGP_CBAJ_G0013537.1 mouse_genomes_project 6 154288036 154288408 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000184.1 MGP_CBAJ_G0000139.1 mouse_genomes_project 6 74876532 74877086 - MGP_CBAJ_P0000184 Igkv5-39 IG_V_gene IG_V_gene MGP_CBAJ_T0000185.1 MGP_CBAJ_G0000139.1 mouse_genomes_project 6 74876532 74876819 - MGP_CBAJ_P0000185 Igkv5-39 IG_V_gene IG_V_gene MGP_CBAJ_T0077689.1 MGP_CBAJ_G0030547.1 mouse_genomes_project 6 78095208 78121337 + MGP_CBAJ_P0077689 Capg protein_coding protein_coding MGP_CBAJ_T0077690.1 MGP_CBAJ_G0030547.1 mouse_genomes_project 6 78095354 78121335 + MGP_CBAJ_P0077690 Capg protein_coding protein_coding MGP_CBAJ_T0077691.1 MGP_CBAJ_G0030547.1 mouse_genomes_project 6 78096586 78110856 + MGP_CBAJ_P0077691 Capg protein_coding protein_coding MGP_CBAJ_T0077692.1 MGP_CBAJ_G0030547.1 mouse_genomes_project 6 78102543 78112351 + MGP_CBAJ_P0077692 Capg protein_coding protein_coding MGP_CBAJ_T0077693.1 MGP_CBAJ_G0030547.1 mouse_genomes_project 6 78103883 78121337 + MGP_CBAJ_P0077693 Capg protein_coding protein_coding MGP_CBAJ_T0077694.1 MGP_CBAJ_G0030547.1 mouse_genomes_project 6 78104042 78112322 + Capg protein_coding retained_intron MGP_CBAJ_T0077695.1 MGP_CBAJ_G0030547.1 mouse_genomes_project 6 78104061 78110470 + MGP_CBAJ_P0077695 Capg protein_coding protein_coding MGP_CBAJ_T0077696.1 MGP_CBAJ_G0030547.1 mouse_genomes_project 6 78104068 78110239 + Capg protein_coding retained_intron MGP_CBAJ_T0077697.1 MGP_CBAJ_G0030547.1 mouse_genomes_project 6 78104262 78110428 + MGP_CBAJ_P0077697 Capg protein_coding protein_coding MGP_CBAJ_T0077698.1 MGP_CBAJ_G0030547.1 mouse_genomes_project 6 78107545 78112838 + MGP_CBAJ_P0077698 Capg protein_coding protein_coding MGP_CBAJ_T0077699.1 MGP_CBAJ_G0030547.1 mouse_genomes_project 6 78110582 78112428 + Capg protein_coding retained_intron MGP_CBAJ_T0098442.1 MGP_CBAJ_G0036704.1 mouse_genomes_project 6 123848569 123852622 + Gm44200 sense_intronic sense_intronic MGP_CBAJ_T0015422.1 MGP_CBAJ_G0013534.1 mouse_genomes_project 6 150152664 150153058 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0075853.1 MGP_CBAJ_G0030119.1 mouse_genomes_project 6 5017641 5050997 + MGP_CBAJ_P0075853 C1galt1 protein_coding protein_coding MGP_CBAJ_T0079579.1 MGP_CBAJ_G0030915.1 mouse_genomes_project 6 136239759 136257298 + MGP_CBAJ_P0079579 C1rl protein_coding protein_coding MGP_CBAJ_T0008608.1 MGP_CBAJ_G0006947.1 mouse_genomes_project 6 128259301 128286350 - Gm45083 lincRNA lincRNA MGP_CBAJ_T0079194.1 MGP_CBAJ_G0030839.1 mouse_genomes_project 6 127222581 127224773 + MGP_CBAJ_P0079194 8430408G22Rik protein_coding protein_coding MGP_CBAJ_T0079195.1 MGP_CBAJ_G0030839.1 mouse_genomes_project 6 127222600 127224773 + MGP_CBAJ_P0079195 8430408G22Rik protein_coding protein_coding MGP_CBAJ_T0079196.1 MGP_CBAJ_G0030839.1 mouse_genomes_project 6 127222668 127223884 + MGP_CBAJ_P0079196 8430408G22Rik protein_coding protein_coding MGP_CBAJ_T0000198.1 MGP_CBAJ_G0000148.1 mouse_genomes_project 6 75187179 75187484 - MGP_CBAJ_P0000198 IG_V_gene IG_V_gene MGP_CBAJ_T0077562.1 MGP_CBAJ_G0030526.1 mouse_genomes_project 6 76691328 76698572 - Rmnd5a protein_coding processed_transcript MGP_CBAJ_T0077563.1 MGP_CBAJ_G0030526.1 mouse_genomes_project 6 76692392 76750133 - MGP_CBAJ_P0077563 Rmnd5a protein_coding protein_coding MGP_CBAJ_T0077564.1 MGP_CBAJ_G0030526.1 mouse_genomes_project 6 76693571 76698477 - Rmnd5a protein_coding processed_transcript MGP_CBAJ_T0077565.1 MGP_CBAJ_G0030526.1 mouse_genomes_project 6 76696734 76699490 - Rmnd5a protein_coding retained_intron MGP_CBAJ_T0002151.1 MGP_CBAJ_G0002066.1 mouse_genomes_project 6 164173824 164175291 - TEC TEC MGP_CBAJ_T0080456.1 MGP_CBAJ_G0031133.1 mouse_genomes_project 6 157379346 157398349 + MGP_CBAJ_P0080456 Cmas protein_coding protein_coding MGP_CBAJ_T0080457.1 MGP_CBAJ_G0031133.1 mouse_genomes_project 6 157379414 157393225 + MGP_CBAJ_P0080457 Cmas protein_coding nonsense_mediated_decay MGP_CBAJ_T0080458.1 MGP_CBAJ_G0031133.1 mouse_genomes_project 6 157379424 157397299 + MGP_CBAJ_P0080458 Cmas protein_coding nonsense_mediated_decay MGP_CBAJ_T0080459.1 MGP_CBAJ_G0031133.1 mouse_genomes_project 6 157379435 157394855 + MGP_CBAJ_P0080459 Cmas protein_coding nonsense_mediated_decay MGP_CBAJ_T0080460.1 MGP_CBAJ_G0031133.1 mouse_genomes_project 6 157392600 157393969 + Cmas protein_coding retained_intron MGP_CBAJ_T0079585.1 MGP_CBAJ_G0030920.1 mouse_genomes_project 6 136322413 136336150 - MGP_CBAJ_P0079585 protein_coding protein_coding MGP_CBAJ_T0076380.1 MGP_CBAJ_G0030218.1 mouse_genomes_project 6 30558505 30582845 + MGP_CBAJ_P0076380 Mest protein_coding protein_coding MGP_CBAJ_T0076381.1 MGP_CBAJ_G0030218.1 mouse_genomes_project 6 30558505 30571838 + MGP_CBAJ_P0076381 Mest protein_coding protein_coding MGP_CBAJ_T0076382.1 MGP_CBAJ_G0030218.1 mouse_genomes_project 6 30571091 30582849 + MGP_CBAJ_P0076382 Mest protein_coding protein_coding MGP_CBAJ_T0076383.1 MGP_CBAJ_G0030218.1 mouse_genomes_project 6 30572577 30583107 + MGP_CBAJ_P0076383 Mest protein_coding protein_coding MGP_CBAJ_T0076384.1 MGP_CBAJ_G0030218.1 mouse_genomes_project 6 30572629 30588733 + MGP_CBAJ_P0076384 Mest protein_coding protein_coding MGP_CBAJ_T0076385.1 MGP_CBAJ_G0030218.1 mouse_genomes_project 6 30577165 30588733 + MGP_CBAJ_P0076385 Mest protein_coding protein_coding MGP_CBAJ_T0076386.1 MGP_CBAJ_G0030218.1 mouse_genomes_project 6 30577168 30588736 + MGP_CBAJ_P0076386 Mest protein_coding protein_coding MGP_CBAJ_T0076387.1 MGP_CBAJ_G0030218.1 mouse_genomes_project 6 30577170 30577994 + Mest protein_coding processed_transcript MGP_CBAJ_T0076388.1 MGP_CBAJ_G0030218.1 mouse_genomes_project 6 30581052 30583413 + Mest protein_coding retained_intron MGP_CBAJ_T0076389.1 MGP_CBAJ_G0030218.1 mouse_genomes_project 6 30582346 30583411 + Mest protein_coding retained_intron MGP_CBAJ_T0076390.1 MGP_CBAJ_G0030218.1 mouse_genomes_project 6 30582359 30583421 + Mest protein_coding retained_intron MGP_CBAJ_T0079522.1 MGP_CBAJ_G0030896.1 mouse_genomes_project 6 134361604 134363130 + Necap1 protein_coding processed_transcript MGP_CBAJ_T0079523.1 MGP_CBAJ_G0030896.1 mouse_genomes_project 6 134361624 134375912 + MGP_CBAJ_P0079523 Necap1 protein_coding protein_coding MGP_CBAJ_T0079524.1 MGP_CBAJ_G0030896.1 mouse_genomes_project 6 134361626 134369573 + Necap1 protein_coding retained_intron MGP_CBAJ_T0079525.1 MGP_CBAJ_G0030896.1 mouse_genomes_project 6 134361636 134368288 + Necap1 protein_coding retained_intron MGP_CBAJ_T0077513.1 MGP_CBAJ_G0030512.1 mouse_genomes_project 6 71640434 71679868 + Serbp1 protein_coding processed_transcript MGP_CBAJ_T0077514.1 MGP_CBAJ_G0030512.1 mouse_genomes_project 6 71675220 71706299 + MGP_CBAJ_P0077514 Serbp1 protein_coding protein_coding MGP_CBAJ_T0077515.1 MGP_CBAJ_G0030512.1 mouse_genomes_project 6 71675579 71692883 + MGP_CBAJ_P0077515 Serbp1 protein_coding protein_coding MGP_CBAJ_T0077516.1 MGP_CBAJ_G0030512.1 mouse_genomes_project 6 71675584 71677951 + Serbp1 protein_coding retained_intron MGP_CBAJ_T0077517.1 MGP_CBAJ_G0030512.1 mouse_genomes_project 6 71675601 71692643 + MGP_CBAJ_P0077517 Serbp1 protein_coding protein_coding MGP_CBAJ_T0077518.1 MGP_CBAJ_G0030512.1 mouse_genomes_project 6 71675606 71692624 + MGP_CBAJ_P0077518 Serbp1 protein_coding protein_coding MGP_CBAJ_T0077519.1 MGP_CBAJ_G0030512.1 mouse_genomes_project 6 71675607 71682606 + Serbp1 protein_coding retained_intron MGP_CBAJ_T0077520.1 MGP_CBAJ_G0030512.1 mouse_genomes_project 6 71675607 71692624 + MGP_CBAJ_P0077520 Serbp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077521.1 MGP_CBAJ_G0030512.1 mouse_genomes_project 6 71675607 71692888 + MGP_CBAJ_P0077521 Serbp1 protein_coding protein_coding MGP_CBAJ_T0077522.1 MGP_CBAJ_G0030512.1 mouse_genomes_project 6 71675612 71683201 + Serbp1 protein_coding retained_intron MGP_CBAJ_T0077523.1 MGP_CBAJ_G0030512.1 mouse_genomes_project 6 71675634 71686377 + MGP_CBAJ_P0077523 Serbp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077524.1 MGP_CBAJ_G0030512.1 mouse_genomes_project 6 71675667 71692591 + MGP_CBAJ_P0077524 Serbp1 protein_coding protein_coding MGP_CBAJ_T0077525.1 MGP_CBAJ_G0030512.1 mouse_genomes_project 6 71675675 71680836 + Serbp1 protein_coding retained_intron MGP_CBAJ_T0077526.1 MGP_CBAJ_G0030512.1 mouse_genomes_project 6 71675853 71681451 + MGP_CBAJ_P0077526 Serbp1 protein_coding protein_coding MGP_CBAJ_T0077527.1 MGP_CBAJ_G0030512.1 mouse_genomes_project 6 71675926 71690384 + MGP_CBAJ_P0077527 Serbp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077528.1 MGP_CBAJ_G0030512.1 mouse_genomes_project 6 71680474 71690401 + Serbp1 protein_coding retained_intron MGP_CBAJ_T0008534.1 MGP_CBAJ_G0006892.1 mouse_genomes_project 6 88207375 88255341 - Gm43902 lincRNA lincRNA MGP_CBAJ_T0002611.1 MGP_CBAJ_G0002499.1 mouse_genomes_project 6 41988795 41989452 + MGP_CBAJ_P0002611 Trbv1 TR_V_gene TR_V_gene MGP_CBAJ_T0077050.1 MGP_CBAJ_G0030386.1 mouse_genomes_project 6 51122559 51126342 + MGP_CBAJ_P0077050 Doxl2 protein_coding protein_coding MGP_CBAJ_T0077051.1 MGP_CBAJ_G0030386.1 mouse_genomes_project 6 51122670 51126343 + MGP_CBAJ_P0077051 Doxl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077052.1 MGP_CBAJ_G0030386.1 mouse_genomes_project 6 51124830 51126340 + Doxl2 protein_coding retained_intron MGP_CBAJ_T0015430.1 MGP_CBAJ_G0013542.1 mouse_genomes_project 6 154741086 154744646 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0078591.1 MGP_CBAJ_G0030728.1 mouse_genomes_project 6 100583024 100598277 + MGP_CBAJ_P0078591 Gm15737 protein_coding protein_coding MGP_CBAJ_T0076865.1 MGP_CBAJ_G0030346.1 mouse_genomes_project 6 44576237 44585016 + MGP_CBAJ_P0076865 Olfr47 protein_coding protein_coding MGP_CBAJ_T0004946.1 MGP_CBAJ_G0004223.1 mouse_genomes_project 6 96089859 96099309 - Gm26588 antisense antisense MGP_CBAJ_T0004947.1 MGP_CBAJ_G0004223.1 mouse_genomes_project 6 96092679 96097949 - Gm26588 antisense antisense MGP_CBAJ_T0076852.1 MGP_CBAJ_G0030336.1 mouse_genomes_project 6 44161375 44162308 + MGP_CBAJ_P0076852 Olfr448 protein_coding protein_coding MGP_CBAJ_T0077651.1 MGP_CBAJ_G0030541.1 mouse_genomes_project 6 77871412 77873825 - Rnf181 protein_coding retained_intron MGP_CBAJ_T0077652.1 MGP_CBAJ_G0030541.1 mouse_genomes_project 6 77871412 77874095 - MGP_CBAJ_P0077652 Rnf181 protein_coding protein_coding MGP_CBAJ_T0077653.1 MGP_CBAJ_G0030541.1 mouse_genomes_project 6 77871412 77874134 - MGP_CBAJ_P0077653 Rnf181 protein_coding protein_coding MGP_CBAJ_T0077654.1 MGP_CBAJ_G0030541.1 mouse_genomes_project 6 77871570 77874062 - MGP_CBAJ_P0077654 Rnf181 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077655.1 MGP_CBAJ_G0030541.1 mouse_genomes_project 6 77871782 77873098 - MGP_CBAJ_P0077655 Rnf181 protein_coding protein_coding MGP_CBAJ_T0077656.1 MGP_CBAJ_G0030541.1 mouse_genomes_project 6 77871943 77878642 - MGP_CBAJ_P0077656 Rnf181 protein_coding protein_coding MGP_CBAJ_T0077657.1 MGP_CBAJ_G0030541.1 mouse_genomes_project 6 77871949 77874046 - MGP_CBAJ_P0077657 Rnf181 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077658.1 MGP_CBAJ_G0030541.1 mouse_genomes_project 6 77871975 77874092 - MGP_CBAJ_P0077658 Rnf181 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077659.1 MGP_CBAJ_G0030541.1 mouse_genomes_project 6 77871976 77874065 - MGP_CBAJ_P0077659 Rnf181 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077660.1 MGP_CBAJ_G0030541.1 mouse_genomes_project 6 77871986 77874084 - MGP_CBAJ_P0077660 Rnf181 protein_coding protein_coding MGP_CBAJ_T0077661.1 MGP_CBAJ_G0030541.1 mouse_genomes_project 6 77872034 77874067 - MGP_CBAJ_P0077661 Rnf181 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077662.1 MGP_CBAJ_G0030541.1 mouse_genomes_project 6 77872116 77872768 - Rnf181 protein_coding retained_intron MGP_CBAJ_T0077663.1 MGP_CBAJ_G0030541.1 mouse_genomes_project 6 77872311 77874130 - Rnf181 protein_coding retained_intron MGP_CBAJ_T0077664.1 MGP_CBAJ_G0030541.1 mouse_genomes_project 6 77872711 77873697 - Rnf181 protein_coding retained_intron MGP_CBAJ_T0100686.1 MGP_CBAJ_G0038941.1 mouse_genomes_project 6 98366004 98366100 + Gm25185 snoRNA snoRNA MGP_CBAJ_T0079696.1 MGP_CBAJ_G0030939.1 mouse_genomes_project 6 136643879 136648148 - MGP_CBAJ_P0079696 Ptms protein_coding protein_coding MGP_CBAJ_T0079697.1 MGP_CBAJ_G0030939.1 mouse_genomes_project 6 136643886 136644876 - Ptms protein_coding processed_transcript MGP_CBAJ_T0079698.1 MGP_CBAJ_G0030939.1 mouse_genomes_project 6 136643962 136650316 - Ptms protein_coding processed_transcript MGP_CBAJ_T0079699.1 MGP_CBAJ_G0030939.1 mouse_genomes_project 6 136644247 136645426 - Ptms protein_coding retained_intron MGP_CBAJ_T0079700.1 MGP_CBAJ_G0030939.1 mouse_genomes_project 6 136644842 136645731 - Ptms protein_coding processed_transcript MGP_CBAJ_T0001913.1 MGP_CBAJ_G0001829.1 mouse_genomes_project 6 35092578 35093809 + TEC TEC MGP_CBAJ_T0010697.1 MGP_CBAJ_G0008835.1 mouse_genomes_project 6 151920706 151920820 - Gm24308 miRNA miRNA MGP_CBAJ_T0078412.1 MGP_CBAJ_G0030681.1 mouse_genomes_project 6 96469595 96481365 + protein_coding lincRNA MGP_CBAJ_T0078413.1 MGP_CBAJ_G0030681.1 mouse_genomes_project 6 96469595 96483504 + protein_coding lincRNA MGP_CBAJ_T0078414.1 MGP_CBAJ_G0030681.1 mouse_genomes_project 6 96474547 96481685 + protein_coding lincRNA MGP_CBAJ_T0078415.1 MGP_CBAJ_G0030681.1 mouse_genomes_project 6 96474965 96483503 + MGP_CBAJ_P0078415 protein_coding protein_coding MGP_CBAJ_T0076748.1 MGP_CBAJ_G0030296.1 mouse_genomes_project 6 42451598 42458948 - MGP_CBAJ_P0076748 protein_coding protein_coding MGP_CBAJ_T0010644.1 MGP_CBAJ_G0008782.1 mouse_genomes_project 6 54109437 54109514 + Gm22914 miRNA miRNA MGP_CBAJ_T0008667.1 MGP_CBAJ_G0006991.1 mouse_genomes_project 6 160149196 160150513 + Gm15706 lincRNA lincRNA MGP_CBAJ_T0010651.1 MGP_CBAJ_G0008789.1 mouse_genomes_project 6 76552838 76552969 + Mir8112 miRNA miRNA MGP_CBAJ_T0098080.1 MGP_CBAJ_G0036353.1 mouse_genomes_project 6 154453434 154453545 - Gm24174 rRNA rRNA MGP_CBAJ_T0075869.1 MGP_CBAJ_G0030124.1 mouse_genomes_project 6 5474884 5847092 + MGP_CBAJ_P0075869 Gm45062 protein_coding nonsense_mediated_decay MGP_CBAJ_T0000173.1 MGP_CBAJ_G0000130.1 mouse_genomes_project 6 73570111 73570878 - MGP_CBAJ_P0000173 Igkv1-88 IG_V_gene IG_V_gene MGP_CBAJ_T0015302.1 MGP_CBAJ_G0013414.1 mouse_genomes_project 6 114792835 114793143 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0075858.1 MGP_CBAJ_G0030121.1 mouse_genomes_project 6 5419640 5448065 + MGP_CBAJ_P0075858 Mios protein_coding protein_coding MGP_CBAJ_T0075859.1 MGP_CBAJ_G0030121.1 mouse_genomes_project 6 5437048 5448059 + Mios protein_coding retained_intron MGP_CBAJ_T0075860.1 MGP_CBAJ_G0030121.1 mouse_genomes_project 6 5439918 5448059 + Mios protein_coding retained_intron MGP_CBAJ_T0076550.1 MGP_CBAJ_G0030247.1 mouse_genomes_project 6 36809882 36962983 + MGP_CBAJ_P0076550 Chrm2 protein_coding protein_coding MGP_CBAJ_T0076551.1 MGP_CBAJ_G0030247.1 mouse_genomes_project 6 36809993 36873462 + Chrm2 protein_coding processed_transcript MGP_CBAJ_T0002071.1 MGP_CBAJ_G0001987.1 mouse_genomes_project 6 110095725 110096613 - TEC TEC MGP_CBAJ_T0101972.1 MGP_CBAJ_G0040003.1 mouse_genomes_project 6 27962626 27963494 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0077176.1 MGP_CBAJ_G0030417.1 mouse_genomes_project 6 54820588 54824284 - MGP_CBAJ_P0077176 Hoxa11 protein_coding protein_coding MGP_CBAJ_T0077177.1 MGP_CBAJ_G0030417.1 mouse_genomes_project 6 54820592 54824269 - Hoxa11 protein_coding processed_transcript MGP_CBAJ_T0080124.1 MGP_CBAJ_G0031059.1 mouse_genomes_project 6 146127861 146129019 - MGP_CBAJ_P0080124 Tas2r117 protein_coding protein_coding MGP_CBAJ_T0079723.1 MGP_CBAJ_G0030943.1 mouse_genomes_project 6 136746559 136776461 + Zfp384 protein_coding retained_intron MGP_CBAJ_T0079724.1 MGP_CBAJ_G0030943.1 mouse_genomes_project 6 136746559 136781145 + MGP_CBAJ_P0079724 Zfp384 protein_coding protein_coding MGP_CBAJ_T0079725.1 MGP_CBAJ_G0030943.1 mouse_genomes_project 6 136746603 136781145 + Zfp384 protein_coding retained_intron MGP_CBAJ_T0079726.1 MGP_CBAJ_G0030943.1 mouse_genomes_project 6 136746614 136781373 + MGP_CBAJ_P0079726 Zfp384 protein_coding protein_coding MGP_CBAJ_T0079727.1 MGP_CBAJ_G0030943.1 mouse_genomes_project 6 136746653 136772191 + Zfp384 protein_coding processed_transcript MGP_CBAJ_T0079728.1 MGP_CBAJ_G0030943.1 mouse_genomes_project 6 136746660 136781268 + MGP_CBAJ_P0079728 Zfp384 protein_coding protein_coding MGP_CBAJ_T0079729.1 MGP_CBAJ_G0030943.1 mouse_genomes_project 6 136747047 136781378 + MGP_CBAJ_P0079729 Zfp384 protein_coding protein_coding MGP_CBAJ_T0079730.1 MGP_CBAJ_G0030943.1 mouse_genomes_project 6 136747091 136762202 + Zfp384 protein_coding processed_transcript MGP_CBAJ_T0079731.1 MGP_CBAJ_G0030943.1 mouse_genomes_project 6 136747093 136762348 + MGP_CBAJ_P0079731 Zfp384 protein_coding protein_coding MGP_CBAJ_T0079732.1 MGP_CBAJ_G0030943.1 mouse_genomes_project 6 136747113 136781145 + MGP_CBAJ_P0079732 Zfp384 protein_coding protein_coding MGP_CBAJ_T0079733.1 MGP_CBAJ_G0030943.1 mouse_genomes_project 6 136747114 136781145 + MGP_CBAJ_P0079733 Zfp384 protein_coding protein_coding MGP_CBAJ_T0079734.1 MGP_CBAJ_G0030943.1 mouse_genomes_project 6 136747123 136773074 + Zfp384 protein_coding retained_intron MGP_CBAJ_T0079735.1 MGP_CBAJ_G0030943.1 mouse_genomes_project 6 136747183 136781145 + MGP_CBAJ_P0079735 Zfp384 protein_coding protein_coding MGP_CBAJ_T0079736.1 MGP_CBAJ_G0030943.1 mouse_genomes_project 6 136747770 136781145 + MGP_CBAJ_P0079736 Zfp384 protein_coding protein_coding MGP_CBAJ_T0079737.1 MGP_CBAJ_G0030943.1 mouse_genomes_project 6 136762221 136773070 + Zfp384 protein_coding retained_intron MGP_CBAJ_T0079738.1 MGP_CBAJ_G0030943.1 mouse_genomes_project 6 136770690 136781325 + Zfp384 protein_coding retained_intron MGP_CBAJ_T0015270.1 MGP_CBAJ_G0013382.1 mouse_genomes_project 6 100879063 100880050 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100680.1 MGP_CBAJ_G0038935.1 mouse_genomes_project 6 77276679 77276816 - Gm22486 snoRNA snoRNA MGP_CBAJ_T0002087.1 MGP_CBAJ_G0002003.1 mouse_genomes_project 6 123975637 123976332 + TEC TEC MGP_CBAJ_T0079848.1 MGP_CBAJ_G0030964.1 mouse_genomes_project 6 138016959 138092094 - MGP_CBAJ_P0079848 Ntf3 protein_coding protein_coding MGP_CBAJ_T0079849.1 MGP_CBAJ_G0030964.1 mouse_genomes_project 6 138016959 138090339 - MGP_CBAJ_P0079849 Ntf3 protein_coding protein_coding MGP_CBAJ_T0079850.1 MGP_CBAJ_G0030964.1 mouse_genomes_project 6 138016959 138092289 - MGP_CBAJ_P0079850 Ntf3 protein_coding protein_coding MGP_CBAJ_T0015201.1 MGP_CBAJ_G0013313.1 mouse_genomes_project 6 72917275 72917566 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0075785.1 MGP_CBAJ_G0030104.1 mouse_genomes_project 6 1606788 1623067 + MGP_CBAJ_P0075785 protein_coding protein_coding MGP_CBAJ_T0075786.1 MGP_CBAJ_G0030104.1 mouse_genomes_project 6 1606788 1623070 + MGP_CBAJ_P0075786 protein_coding protein_coding MGP_CBAJ_T0075787.1 MGP_CBAJ_G0030104.1 mouse_genomes_project 6 1606888 1623070 + MGP_CBAJ_P0075787 protein_coding protein_coding MGP_CBAJ_T0002024.1 MGP_CBAJ_G0001940.1 mouse_genomes_project 6 95096512 95099658 - TEC TEC MGP_CBAJ_T0078585.1 MGP_CBAJ_G0030726.1 mouse_genomes_project 6 100476947 100661965 - MGP_CBAJ_P0078585 Adamts9 protein_coding protein_coding MGP_CBAJ_T0078586.1 MGP_CBAJ_G0030726.1 mouse_genomes_project 6 100505076 100573783 - Adamts9 protein_coding retained_intron MGP_CBAJ_T0078589.1 MGP_CBAJ_G0030726.1 mouse_genomes_project 6 100559343 100573793 - Adamts9 protein_coding retained_intron MGP_CBAJ_T0078590.1 MGP_CBAJ_G0030726.1 mouse_genomes_project 6 100565627 100568315 - Adamts9 protein_coding retained_intron MGP_CBAJ_T0078592.1 MGP_CBAJ_G0030726.1 mouse_genomes_project 6 100642684 100662302 - Adamts9 protein_coding processed_transcript MGP_CBAJ_T0098215.1 MGP_CBAJ_G0036488.1 mouse_genomes_project 6 153392413 153392580 - Gm25434 scaRNA scaRNA MGP_CBAJ_T0076501.1 MGP_CBAJ_G0030237.1 mouse_genomes_project 6 35096016 35110764 + Tmem140 protein_coding processed_transcript MGP_CBAJ_T0076502.1 MGP_CBAJ_G0030237.1 mouse_genomes_project 6 35096016 35114120 + MGP_CBAJ_P0076502 Tmem140 protein_coding protein_coding MGP_CBAJ_T0076503.1 MGP_CBAJ_G0030237.1 mouse_genomes_project 6 35096132 35111790 + MGP_CBAJ_P0076503 Tmem140 protein_coding protein_coding MGP_CBAJ_T0076504.1 MGP_CBAJ_G0030237.1 mouse_genomes_project 6 35103000 35108002 + Tmem140 protein_coding processed_transcript MGP_CBAJ_T0076505.1 MGP_CBAJ_G0030237.1 mouse_genomes_project 6 35103032 35111915 + MGP_CBAJ_P0076505 Tmem140 protein_coding protein_coding MGP_CBAJ_T0076508.1 MGP_CBAJ_G0030237.1 mouse_genomes_project 6 35111890 35112732 + Tmem140 protein_coding processed_transcript MGP_CBAJ_T0078531.1 MGP_CBAJ_G0030716.1 mouse_genomes_project 6 99270622 99333554 + Slc6a6 protein_coding processed_transcript MGP_CBAJ_T0078532.1 MGP_CBAJ_G0030716.1 mouse_genomes_project 6 99270646 99359751 + MGP_CBAJ_P0078532 Slc6a6 protein_coding protein_coding MGP_CBAJ_T0078533.1 MGP_CBAJ_G0030716.1 mouse_genomes_project 6 99270648 99325305 + Slc6a6 protein_coding retained_intron MGP_CBAJ_T0078534.1 MGP_CBAJ_G0030716.1 mouse_genomes_project 6 99270673 99323316 + MGP_CBAJ_P0078534 Slc6a6 protein_coding protein_coding MGP_CBAJ_T0078535.1 MGP_CBAJ_G0030716.1 mouse_genomes_project 6 99270681 99323351 + MGP_CBAJ_P0078535 Slc6a6 protein_coding protein_coding MGP_CBAJ_T0078536.1 MGP_CBAJ_G0030716.1 mouse_genomes_project 6 99270702 99289178 + Slc6a6 protein_coding retained_intron MGP_CBAJ_T0078537.1 MGP_CBAJ_G0030716.1 mouse_genomes_project 6 99291507 99323237 + MGP_CBAJ_P0078537 Slc6a6 protein_coding protein_coding MGP_CBAJ_T0078538.1 MGP_CBAJ_G0030716.1 mouse_genomes_project 6 99323332 99345716 + MGP_CBAJ_P0078538 Slc6a6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078539.1 MGP_CBAJ_G0030716.1 mouse_genomes_project 6 99338022 99339469 + Slc6a6 protein_coding retained_intron MGP_CBAJ_T0078540.1 MGP_CBAJ_G0030716.1 mouse_genomes_project 6 99349042 99350857 + Slc6a6 protein_coding retained_intron MGP_CBAJ_T0078541.1 MGP_CBAJ_G0030716.1 mouse_genomes_project 6 99350870 99353465 + Slc6a6 protein_coding retained_intron MGP_CBAJ_T0076689.1 MGP_CBAJ_G0030276.1 mouse_genomes_project 6 40492379 40642309 - MGP_CBAJ_P0076689 Braf protein_coding protein_coding MGP_CBAJ_T0076690.1 MGP_CBAJ_G0030276.1 mouse_genomes_project 6 40503448 40642039 - MGP_CBAJ_P0076690 Braf protein_coding protein_coding MGP_CBAJ_T0076691.1 MGP_CBAJ_G0030276.1 mouse_genomes_project 6 40529113 40534608 - Braf protein_coding retained_intron MGP_CBAJ_T0076692.1 MGP_CBAJ_G0030276.1 mouse_genomes_project 6 40530128 40533076 - Braf protein_coding retained_intron MGP_CBAJ_T0076693.1 MGP_CBAJ_G0030276.1 mouse_genomes_project 6 40541395 40560647 - Braf protein_coding retained_intron MGP_CBAJ_T0076529.1 MGP_CBAJ_G0030242.1 mouse_genomes_project 6 35294890 35297736 - Cnot4 protein_coding retained_intron MGP_CBAJ_T0076530.1 MGP_CBAJ_G0030242.1 mouse_genomes_project 6 35294890 35416811 - MGP_CBAJ_P0076530 Cnot4 protein_coding protein_coding MGP_CBAJ_T0076531.1 MGP_CBAJ_G0030242.1 mouse_genomes_project 6 35294891 35416880 - MGP_CBAJ_P0076531 Cnot4 protein_coding protein_coding MGP_CBAJ_T0076532.1 MGP_CBAJ_G0030242.1 mouse_genomes_project 6 35294896 35416875 - MGP_CBAJ_P0076532 Cnot4 protein_coding protein_coding MGP_CBAJ_T0076533.1 MGP_CBAJ_G0030242.1 mouse_genomes_project 6 35317562 35416901 - MGP_CBAJ_P0076533 Cnot4 protein_coding protein_coding MGP_CBAJ_T0076534.1 MGP_CBAJ_G0030242.1 mouse_genomes_project 6 35318862 35360885 - MGP_CBAJ_P0076534 Cnot4 protein_coding unknown_likely_coding MGP_CBAJ_T0076535.1 MGP_CBAJ_G0030242.1 mouse_genomes_project 6 35325101 35329048 - Cnot4 protein_coding retained_intron MGP_CBAJ_T0076536.1 MGP_CBAJ_G0030242.1 mouse_genomes_project 6 35325531 35416873 - Cnot4 protein_coding processed_transcript MGP_CBAJ_T0001976.1 MGP_CBAJ_G0001892.1 mouse_genomes_project 6 78206808 78208036 - TEC TEC MGP_CBAJ_T0078853.1 MGP_CBAJ_G0030779.1 mouse_genomes_project 6 123346081 123376432 - MGP_CBAJ_P0078853 Lhfpl4 protein_coding protein_coding MGP_CBAJ_T0078854.1 MGP_CBAJ_G0030779.1 mouse_genomes_project 6 123353217 123373364 - MGP_CBAJ_P0078854 Lhfpl4 protein_coding protein_coding MGP_CBAJ_T0008533.1 MGP_CBAJ_G0006891.1 mouse_genomes_project 6 85086441 85086761 - Gm29005 lincRNA lincRNA MGP_CBAJ_T0015415.1 MGP_CBAJ_G0013527.1 mouse_genomes_project 6 147010948 147011277 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000203.1 MGP_CBAJ_G0000152.1 mouse_genomes_project 6 75835944 75836552 + MGP_CBAJ_P0000203 IG_V_gene IG_V_gene MGP_CBAJ_T0015395.1 MGP_CBAJ_G0013507.1 mouse_genomes_project 6 144145585 144145700 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015249.1 MGP_CBAJ_G0013361.1 mouse_genomes_project 6 92074268 92074812 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004999.1 MGP_CBAJ_G0004262.1 mouse_genomes_project 6 136647064 136657654 + A230083G16Rik antisense antisense MGP_CBAJ_T0000182.1 MGP_CBAJ_G0000137.1 mouse_genomes_project 6 74693176 74693765 - MGP_CBAJ_P0000182 IG_V_gene IG_V_gene MGP_CBAJ_T0079411.1 MGP_CBAJ_G0030875.1 mouse_genomes_project 6 132069352 132139181 - Mical3 protein_coding processed_transcript MGP_CBAJ_T0079412.1 MGP_CBAJ_G0030875.1 mouse_genomes_project 6 132069370 132119688 - MGP_CBAJ_P0079412 Mical3 protein_coding unknown_likely_coding MGP_CBAJ_T0079413.1 MGP_CBAJ_G0030875.1 mouse_genomes_project 6 132072425 132098408 - Mical3 protein_coding processed_transcript MGP_CBAJ_T0079414.1 MGP_CBAJ_G0030875.1 mouse_genomes_project 6 132072469 132073179 - Mical3 protein_coding retained_intron MGP_CBAJ_T0079415.1 MGP_CBAJ_G0030875.1 mouse_genomes_project 6 132098115 132139181 - Mical3 protein_coding processed_transcript MGP_CBAJ_T0079416.1 MGP_CBAJ_G0030875.1 mouse_genomes_project 6 132099784 132105929 - Mical3 protein_coding processed_transcript MGP_CBAJ_T0079417.1 MGP_CBAJ_G0030875.1 mouse_genomes_project 6 132133379 132161025 - MGP_CBAJ_P0079417 Mical3 protein_coding protein_coding MGP_CBAJ_T0079418.1 MGP_CBAJ_G0030875.1 mouse_genomes_project 6 132143269 132223834 - MGP_CBAJ_P0079418 Mical3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079419.1 MGP_CBAJ_G0030875.1 mouse_genomes_project 6 132143269 132223836 - MGP_CBAJ_P0079419 Mical3 protein_coding protein_coding MGP_CBAJ_T0079420.1 MGP_CBAJ_G0030875.1 mouse_genomes_project 6 132143270 132161040 - MGP_CBAJ_P0079420 Mical3 protein_coding protein_coding MGP_CBAJ_T0079421.1 MGP_CBAJ_G0030875.1 mouse_genomes_project 6 132152601 132268447 - Mical3 protein_coding retained_intron MGP_CBAJ_T0079422.1 MGP_CBAJ_G0030875.1 mouse_genomes_project 6 132152601 132161062 - Mical3 protein_coding processed_transcript MGP_CBAJ_T0079423.1 MGP_CBAJ_G0030875.1 mouse_genomes_project 6 132160983 132291425 - MGP_CBAJ_P0079423 Mical3 protein_coding protein_coding MGP_CBAJ_T0079424.1 MGP_CBAJ_G0030875.1 mouse_genomes_project 6 132161162 132164536 - Mical3 protein_coding retained_intron MGP_CBAJ_T0079425.1 MGP_CBAJ_G0030875.1 mouse_genomes_project 6 132163523 132164182 - Mical3 protein_coding processed_transcript MGP_CBAJ_T0079426.1 MGP_CBAJ_G0030875.1 mouse_genomes_project 6 132169928 132171753 - Mical3 protein_coding retained_intron MGP_CBAJ_T0099443.1 MGP_CBAJ_G0037698.1 mouse_genomes_project 6 103112161 103112268 - Gm26501 snRNA snRNA MGP_CBAJ_T0100663.1 MGP_CBAJ_G0038918.1 mouse_genomes_project 6 51075396 51075526 + Gm24348 snoRNA snoRNA MGP_CBAJ_T0098072.1 MGP_CBAJ_G0036345.1 mouse_genomes_project 6 30159898 30160012 + n-R5s161 rRNA rRNA MGP_CBAJ_T0011520.1 MGP_CBAJ_G0009658.1 mouse_genomes_project 6 54825895 54826128 + Gm27817 misc_RNA misc_RNA MGP_CBAJ_T0000197.1 MGP_CBAJ_G0000147.1 mouse_genomes_project 6 75120006 75120311 - MGP_CBAJ_P0000197 Igkv8-27 IG_V_gene IG_V_gene MGP_CBAJ_T0004964.1 MGP_CBAJ_G0004235.1 mouse_genomes_project 6 109925563 109939698 + Gm26911 antisense antisense MGP_CBAJ_T0004965.1 MGP_CBAJ_G0004235.1 mouse_genomes_project 6 109925580 109949560 + Gm26911 antisense antisense MGP_CBAJ_T0004966.1 MGP_CBAJ_G0004235.1 mouse_genomes_project 6 109925652 109938314 + Gm26911 antisense antisense MGP_CBAJ_T0076973.1 MGP_CBAJ_G0030366.1 mouse_genomes_project 6 50652523 50655478 - Rarres2 protein_coding retained_intron MGP_CBAJ_T0076974.1 MGP_CBAJ_G0030366.1 mouse_genomes_project 6 50652523 50655520 - MGP_CBAJ_P0076974 Rarres2 protein_coding protein_coding MGP_CBAJ_T0076975.1 MGP_CBAJ_G0030366.1 mouse_genomes_project 6 50652523 50655587 - MGP_CBAJ_P0076975 Rarres2 protein_coding protein_coding MGP_CBAJ_T0076976.1 MGP_CBAJ_G0030366.1 mouse_genomes_project 6 50652523 50655619 - MGP_CBAJ_P0076976 Rarres2 protein_coding protein_coding MGP_CBAJ_T0076977.1 MGP_CBAJ_G0030366.1 mouse_genomes_project 6 50652537 50655621 - MGP_CBAJ_P0076977 Rarres2 protein_coding protein_coding MGP_CBAJ_T0015076.1 MGP_CBAJ_G0013188.1 mouse_genomes_project 6 38071125 38071672 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005040.1 MGP_CBAJ_G0004296.1 mouse_genomes_project 6 159565789 159567131 + Sox5os5 antisense antisense MGP_CBAJ_T0078206.1 MGP_CBAJ_G0030647.1 mouse_genomes_project 6 94124403 94280743 + MGP_CBAJ_P0078206 Aak1 protein_coding protein_coding MGP_CBAJ_T0078207.1 MGP_CBAJ_G0030647.1 mouse_genomes_project 6 94124418 94209897 + MGP_CBAJ_P0078207 Aak1 protein_coding protein_coding MGP_CBAJ_T0078208.1 MGP_CBAJ_G0030647.1 mouse_genomes_project 6 94124514 94225203 + Aak1 protein_coding retained_intron MGP_CBAJ_T0078209.1 MGP_CBAJ_G0030647.1 mouse_genomes_project 6 94124939 94264794 + MGP_CBAJ_P0078209 Aak1 protein_coding unknown_likely_coding MGP_CBAJ_T0078210.1 MGP_CBAJ_G0030647.1 mouse_genomes_project 6 94124939 94269369 + MGP_CBAJ_P0078210 Aak1 protein_coding protein_coding MGP_CBAJ_T0078211.1 MGP_CBAJ_G0030647.1 mouse_genomes_project 6 94126071 94209892 + Aak1 protein_coding processed_transcript MGP_CBAJ_T0078212.1 MGP_CBAJ_G0030647.1 mouse_genomes_project 6 94234723 94273401 + MGP_CBAJ_P0078212 Aak1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078213.1 MGP_CBAJ_G0030647.1 mouse_genomes_project 6 94243600 94273724 + Aak1 protein_coding processed_transcript MGP_CBAJ_T0078214.1 MGP_CBAJ_G0030647.1 mouse_genomes_project 6 94262769 94265534 + Aak1 protein_coding retained_intron MGP_CBAJ_T0078215.1 MGP_CBAJ_G0030647.1 mouse_genomes_project 6 94272515 94274180 + Aak1 protein_coding processed_transcript MGP_CBAJ_T0076092.1 MGP_CBAJ_G0030162.1 mouse_genomes_project 6 22168876 22823091 - MGP_CBAJ_P0076092 Cadps2 protein_coding protein_coding MGP_CBAJ_T0076093.1 MGP_CBAJ_G0030162.1 mouse_genomes_project 6 22169527 22823374 - MGP_CBAJ_P0076093 Cadps2 protein_coding protein_coding MGP_CBAJ_T0076094.1 MGP_CBAJ_G0030162.1 mouse_genomes_project 6 22169527 22823375 - MGP_CBAJ_P0076094 Cadps2 protein_coding protein_coding MGP_CBAJ_T0076095.1 MGP_CBAJ_G0030162.1 mouse_genomes_project 6 22169577 22823179 - MGP_CBAJ_P0076095 Cadps2 protein_coding protein_coding MGP_CBAJ_T0076096.1 MGP_CBAJ_G0030162.1 mouse_genomes_project 6 22169592 22823091 - MGP_CBAJ_P0076096 Cadps2 protein_coding protein_coding MGP_CBAJ_T0076097.1 MGP_CBAJ_G0030162.1 mouse_genomes_project 6 22169593 22823178 - MGP_CBAJ_P0076097 Cadps2 protein_coding protein_coding MGP_CBAJ_T0076098.1 MGP_CBAJ_G0030162.1 mouse_genomes_project 6 22169597 22273253 - Cadps2 protein_coding processed_transcript MGP_CBAJ_T0076099.1 MGP_CBAJ_G0030162.1 mouse_genomes_project 6 22170249 22536464 - MGP_CBAJ_P0076099 Cadps2 protein_coding protein_coding MGP_CBAJ_T0076100.1 MGP_CBAJ_G0030162.1 mouse_genomes_project 6 22170249 22823097 - MGP_CBAJ_P0076100 Cadps2 protein_coding protein_coding MGP_CBAJ_T0076101.1 MGP_CBAJ_G0030162.1 mouse_genomes_project 6 22170250 22227449 - Cadps2 protein_coding processed_transcript MGP_CBAJ_T0076102.1 MGP_CBAJ_G0030162.1 mouse_genomes_project 6 22332074 22823217 - MGP_CBAJ_P0076102 Cadps2 protein_coding protein_coding MGP_CBAJ_T0076103.1 MGP_CBAJ_G0030162.1 mouse_genomes_project 6 22530748 22823254 - Cadps2 protein_coding retained_intron MGP_CBAJ_T0076107.1 MGP_CBAJ_G0030162.1 mouse_genomes_project 6 22650539 22823216 - Cadps2 protein_coding retained_intron MGP_CBAJ_T0002124.1 MGP_CBAJ_G0002039.1 mouse_genomes_project 6 150294419 150296810 + TEC TEC MGP_CBAJ_T0076912.1 MGP_CBAJ_G0030353.1 mouse_genomes_project 6 49740050 49757249 - MGP_CBAJ_P0076912 Pdia4 protein_coding protein_coding MGP_CBAJ_T0076913.1 MGP_CBAJ_G0030353.1 mouse_genomes_project 6 49750844 49757183 - Pdia4 protein_coding processed_transcript MGP_CBAJ_T0002010.1 MGP_CBAJ_G0001926.1 mouse_genomes_project 6 93442303 93444663 - TEC TEC MGP_CBAJ_T0011546.1 MGP_CBAJ_G0009684.1 mouse_genomes_project 6 156436774 156436989 - Gm22036 misc_RNA misc_RNA MGP_CBAJ_T0079156.1 MGP_CBAJ_G0030830.1 mouse_genomes_project 6 126760500 126827775 + MGP_CBAJ_P0079156 Zfand4 protein_coding protein_coding MGP_CBAJ_T0000297.1 MGP_CBAJ_G0000242.1 mouse_genomes_project 6 75016811 75017121 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0011707.1 MGP_CBAJ_G0009822.1 mouse_genomes_project 6 44053257 44054193 + MGP_CBAJ_P0011707 Olfr451-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0101999.1 MGP_CBAJ_G0040030.1 mouse_genomes_project 6 61881712 61882612 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0079992.1 MGP_CBAJ_G0030999.1 mouse_genomes_project 6 141278851 141331634 - MGP_CBAJ_P0079992 BC035044 protein_coding protein_coding MGP_CBAJ_T0076562.1 MGP_CBAJ_G0030250.1 mouse_genomes_project 6 37828161 37951673 - MGP_CBAJ_P0076562 Creb3l2 protein_coding protein_coding MGP_CBAJ_T0076563.1 MGP_CBAJ_G0030250.1 mouse_genomes_project 6 37835805 37838049 - Creb3l2 protein_coding processed_transcript MGP_CBAJ_T0001888.1 MGP_CBAJ_G0001804.1 mouse_genomes_project 6 15946070 15948988 + TEC TEC MGP_CBAJ_T0015245.1 MGP_CBAJ_G0013357.1 mouse_genomes_project 6 90709007 90709371 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0102021.1 MGP_CBAJ_G0040052.1 mouse_genomes_project 6 135783798 135784702 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0080182.1 MGP_CBAJ_G0031074.1 mouse_genomes_project 6 148414051 148419208 + MGP_CBAJ_P0080182 Apold1 protein_coding protein_coding MGP_CBAJ_T0002141.1 MGP_CBAJ_G0002056.1 mouse_genomes_project 6 160826947 160828825 + TEC TEC MGP_CBAJ_T0008423.1 MGP_CBAJ_G0006812.1 mouse_genomes_project 6 29694345 29705478 + Smkr-ps lincRNA lincRNA MGP_CBAJ_T0008424.1 MGP_CBAJ_G0006812.1 mouse_genomes_project 6 29694347 29705731 + Smkr-ps lincRNA lincRNA MGP_CBAJ_T0004885.1 MGP_CBAJ_G0004186.1 mouse_genomes_project 6 62385970 62393331 + Gm45060 antisense antisense MGP_CBAJ_T0079649.1 MGP_CBAJ_G0030930.1 mouse_genomes_project 6 136529465 136531424 + MGP_CBAJ_P0079649 Spsb2 protein_coding protein_coding MGP_CBAJ_T0079650.1 MGP_CBAJ_G0030930.1 mouse_genomes_project 6 136529689 136531141 + MGP_CBAJ_P0079650 Spsb2 protein_coding protein_coding MGP_CBAJ_T0079651.1 MGP_CBAJ_G0030930.1 mouse_genomes_project 6 136529710 136531424 + MGP_CBAJ_P0079651 Spsb2 protein_coding protein_coding MGP_CBAJ_T0079652.1 MGP_CBAJ_G0030930.1 mouse_genomes_project 6 136529723 136530743 + MGP_CBAJ_P0079652 Spsb2 protein_coding protein_coding MGP_CBAJ_T0079653.1 MGP_CBAJ_G0030930.1 mouse_genomes_project 6 136530102 136531424 + MGP_CBAJ_P0079653 Spsb2 protein_coding protein_coding MGP_CBAJ_T0080018.1 MGP_CBAJ_G0031008.1 mouse_genomes_project 6 141941218 141948923 + MGP_CBAJ_P0080018 Clec1b protein_coding protein_coding MGP_CBAJ_T0080019.1 MGP_CBAJ_G0031008.1 mouse_genomes_project 6 141941226 141948911 + MGP_CBAJ_P0080019 Clec1b protein_coding protein_coding MGP_CBAJ_T0080020.1 MGP_CBAJ_G0031008.1 mouse_genomes_project 6 141947192 141952963 + Clec1b protein_coding retained_intron MGP_CBAJ_T0075987.1 MGP_CBAJ_G0030144.1 mouse_genomes_project 6 15661668 15787158 + MGP_CBAJ_P0075987 Met protein_coding protein_coding MGP_CBAJ_T0075988.1 MGP_CBAJ_G0030144.1 mouse_genomes_project 6 15661695 15692463 + MGP_CBAJ_P0075988 Met protein_coding protein_coding MGP_CBAJ_T0075989.1 MGP_CBAJ_G0030144.1 mouse_genomes_project 6 15661975 15752601 + Met protein_coding retained_intron MGP_CBAJ_T0075990.1 MGP_CBAJ_G0030144.1 mouse_genomes_project 6 15685218 15784988 + MGP_CBAJ_P0075990 Met protein_coding protein_coding MGP_CBAJ_T0075991.1 MGP_CBAJ_G0030144.1 mouse_genomes_project 6 15691956 15784988 + MGP_CBAJ_P0075991 Met protein_coding protein_coding MGP_CBAJ_T0075992.1 MGP_CBAJ_G0030144.1 mouse_genomes_project 6 15746873 15758394 + MGP_CBAJ_P0075992 Met protein_coding protein_coding MGP_CBAJ_T0075993.1 MGP_CBAJ_G0030144.1 mouse_genomes_project 6 15758156 15764583 + MGP_CBAJ_P0075993 Met protein_coding protein_coding MGP_CBAJ_T0008417.1 MGP_CBAJ_G0006807.1 mouse_genomes_project 6 17686153 17726877 - 4930524B17Rik lincRNA lincRNA MGP_CBAJ_T0011514.1 MGP_CBAJ_G0009652.1 mouse_genomes_project 6 54729763 54729977 + Gm27861 misc_RNA misc_RNA MGP_CBAJ_T0002096.1 MGP_CBAJ_G0002011.1 mouse_genomes_project 6 131676975 131677447 - TEC TEC MGP_CBAJ_T0015171.1 MGP_CBAJ_G0013283.1 mouse_genomes_project 6 69587056 69588845 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015217.1 MGP_CBAJ_G0013329.1 mouse_genomes_project 6 77313393 77316932 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015240.1 MGP_CBAJ_G0013352.1 mouse_genomes_project 6 89640976 89641334 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0079997.1 MGP_CBAJ_G0031001.1 mouse_genomes_project 6 141335180 141337372 + MGP_CBAJ_P0079997 Clec2i protein_coding protein_coding MGP_CBAJ_T0008517.1 MGP_CBAJ_G0006876.1 mouse_genomes_project 6 70796720 70806786 - Gm44029 lincRNA lincRNA MGP_CBAJ_T0008518.1 MGP_CBAJ_G0006876.1 mouse_genomes_project 6 70798965 70806825 - Gm44029 lincRNA lincRNA MGP_CBAJ_T0015377.1 MGP_CBAJ_G0013489.1 mouse_genomes_project 6 139444198 139444731 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018035.1 MGP_CBAJ_G0015383.1 mouse_genomes_project 6 90176918 90183483 + B230319C09Rik processed_transcript antisense MGP_CBAJ_T0018036.1 MGP_CBAJ_G0015383.1 mouse_genomes_project 6 90176973 90180521 + B230319C09Rik processed_transcript processed_transcript MGP_CBAJ_T0018037.1 MGP_CBAJ_G0015383.1 mouse_genomes_project 6 90176975 90177804 + B230319C09Rik processed_transcript processed_transcript MGP_CBAJ_T0079558.1 MGP_CBAJ_G0030909.1 mouse_genomes_project 6 135732023 135760322 + MGP_CBAJ_P0079558 protein_coding protein_coding MGP_CBAJ_T0078425.1 MGP_CBAJ_G0030684.1 mouse_genomes_project 6 97044040 97077713 + MGP_CBAJ_P0078425 Txnrd3 protein_coding protein_coding MGP_CBAJ_T0078426.1 MGP_CBAJ_G0030684.1 mouse_genomes_project 6 97044040 97077713 + MGP_CBAJ_P0078426 Txnrd3 protein_coding protein_coding MGP_CBAJ_T0002533.1 MGP_CBAJ_G0002436.1 mouse_genomes_project 6 42773012 42773059 + MGP_CBAJ_P0002533 Trbj2-7 TR_J_gene TR_J_gene MGP_CBAJ_T0010675.1 MGP_CBAJ_G0008813.1 mouse_genomes_project 6 123961553 123961611 + Mir7042 miRNA miRNA MGP_CBAJ_T0004921.1 MGP_CBAJ_G0004209.1 mouse_genomes_project 6 91874124 91877998 + Gm44012 antisense antisense MGP_CBAJ_T0078438.1 MGP_CBAJ_G0030693.1 mouse_genomes_project 6 97545740 97552393 + MGP_CBAJ_P0078438 Vmn1r50 protein_coding protein_coding MGP_CBAJ_T0078439.1 MGP_CBAJ_G0030693.1 mouse_genomes_project 6 97551460 97552393 + MGP_CBAJ_P0078439 Vmn1r50 protein_coding protein_coding MGP_CBAJ_T0004857.1 MGP_CBAJ_G0004166.1 mouse_genomes_project 6 40830769 40831209 - Gm26833 antisense antisense MGP_CBAJ_T0015143.1 MGP_CBAJ_G0013255.1 mouse_genomes_project 6 61898186 61898447 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010686.1 MGP_CBAJ_G0008824.1 mouse_genomes_project 6 136436225 136436294 - Mir200c miRNA miRNA MGP_CBAJ_T0078675.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107327635 107712315 - MGP_CBAJ_P0078675 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078676.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107327639 107908537 - MGP_CBAJ_P0078676 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078677.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107327712 107332083 - Foxp1 protein_coding processed_transcript MGP_CBAJ_T0078678.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107331486 108002463 - MGP_CBAJ_P0078678 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078679.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107332387 107434351 - MGP_CBAJ_P0078679 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078680.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107332387 107593413 - MGP_CBAJ_P0078680 Foxp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078681.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107332387 107593413 - MGP_CBAJ_P0078681 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078682.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107332387 107593413 - MGP_CBAJ_P0078682 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078683.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107332387 107908537 - MGP_CBAJ_P0078683 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078684.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107332387 107593413 - MGP_CBAJ_P0078684 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078685.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107332387 107908537 - MGP_CBAJ_P0078685 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078686.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107332387 107593413 - MGP_CBAJ_P0078686 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078687.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107332387 107593413 - MGP_CBAJ_P0078687 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078688.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107332387 107593413 - MGP_CBAJ_P0078688 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078689.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107332468 107337843 - Foxp1 protein_coding retained_intron MGP_CBAJ_T0078690.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107347831 107434405 - MGP_CBAJ_P0078690 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078691.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107354498 107406009 - Foxp1 protein_coding retained_intron MGP_CBAJ_T0078692.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107405528 107435034 - MGP_CBAJ_P0078692 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078693.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107405721 107452214 - MGP_CBAJ_P0078693 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078694.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107409013 107434358 - Foxp1 protein_coding processed_transcript MGP_CBAJ_T0078695.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107412261 107513419 - MGP_CBAJ_P0078695 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078696.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107412272 107452197 - MGP_CBAJ_P0078696 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078697.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107420681 107434083 - MGP_CBAJ_P0078697 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078698.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107487664 107694155 - MGP_CBAJ_P0078698 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078699.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107581894 107712315 - Foxp1 protein_coding processed_transcript MGP_CBAJ_T0078700.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107592334 107712332 - Foxp1 protein_coding retained_intron MGP_CBAJ_T0078701.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107592334 107712332 - Foxp1 protein_coding retained_intron MGP_CBAJ_T0078702.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107593323 108002628 - MGP_CBAJ_P0078702 Foxp1 protein_coding protein_coding MGP_CBAJ_T0078704.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107706168 108004118 - Foxp1 protein_coding processed_transcript MGP_CBAJ_T0078705.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107758015 107909387 - Foxp1 protein_coding processed_transcript MGP_CBAJ_T0078708.1 MGP_CBAJ_G0030746.1 mouse_genomes_project 6 107908427 108004192 - Foxp1 protein_coding processed_transcript MGP_CBAJ_T0078766.1 MGP_CBAJ_G0030762.1 mouse_genomes_project 6 116187694 116207984 - MGP_CBAJ_P0078766 Crbn protein_coding protein_coding MGP_CBAJ_T0078767.1 MGP_CBAJ_G0030762.1 mouse_genomes_project 6 116187694 116207975 - MGP_CBAJ_P0078767 Crbn protein_coding protein_coding MGP_CBAJ_T0078768.1 MGP_CBAJ_G0030762.1 mouse_genomes_project 6 116191379 116206943 - MGP_CBAJ_P0078768 Crbn protein_coding protein_coding MGP_CBAJ_T0078769.1 MGP_CBAJ_G0030762.1 mouse_genomes_project 6 116196657 116207971 - Crbn protein_coding retained_intron MGP_CBAJ_T0078770.1 MGP_CBAJ_G0030762.1 mouse_genomes_project 6 116205089 116207987 - Crbn protein_coding retained_intron MGP_CBAJ_T0008617.1 MGP_CBAJ_G0006956.1 mouse_genomes_project 6 133790725 133792034 + 1700063H04Rik lincRNA lincRNA MGP_CBAJ_T0008622.1 MGP_CBAJ_G0006961.1 mouse_genomes_project 6 138273556 138276395 + Gm29009 lincRNA lincRNA MGP_CBAJ_T0004854.1 MGP_CBAJ_G0004164.1 mouse_genomes_project 6 40269520 40270536 + Gm10244 antisense antisense MGP_CBAJ_T0004855.1 MGP_CBAJ_G0004164.1 mouse_genomes_project 6 40270011 40270928 + Gm10244 antisense antisense MGP_CBAJ_T0008496.1 MGP_CBAJ_G0006860.1 mouse_genomes_project 6 54548511 54563851 + Gm44077 lincRNA lincRNA MGP_CBAJ_T0077301.1 MGP_CBAJ_G0030443.1 mouse_genomes_project 6 58613123 58616565 - MGP_CBAJ_P0077301 Neurod6 protein_coding protein_coding MGP_CBAJ_T0100661.1 MGP_CBAJ_G0038916.1 mouse_genomes_project 6 45308058 45308189 + Gm22939 snoRNA snoRNA MGP_CBAJ_T0078739.1 MGP_CBAJ_G0030758.1 mouse_genomes_project 6 113628894 113805886 + MGP_CBAJ_P0078739 Cntn6 protein_coding protein_coding MGP_CBAJ_T0078740.1 MGP_CBAJ_G0030758.1 mouse_genomes_project 6 113629158 113723745 + Cntn6 protein_coding retained_intron MGP_CBAJ_T0078741.1 MGP_CBAJ_G0030758.1 mouse_genomes_project 6 113694690 114050493 + MGP_CBAJ_P0078741 Cntn6 protein_coding protein_coding MGP_CBAJ_T0018053.1 MGP_CBAJ_G0015390.1 mouse_genomes_project 6 137051151 137075589 + processed_transcript antisense MGP_CBAJ_T0018054.1 MGP_CBAJ_G0015390.1 mouse_genomes_project 6 137051200 137052204 + processed_transcript retained_intron MGP_CBAJ_T0018055.1 MGP_CBAJ_G0015390.1 mouse_genomes_project 6 137051220 137056162 + processed_transcript antisense MGP_CBAJ_T0018056.1 MGP_CBAJ_G0015390.1 mouse_genomes_project 6 137051294 137059146 + processed_transcript antisense MGP_CBAJ_T0002635.1 MGP_CBAJ_G0002519.1 mouse_genomes_project 6 42411211 42411826 + MGP_CBAJ_P0002635 Trbv30 TR_V_gene TR_V_gene MGP_CBAJ_T0002636.1 MGP_CBAJ_G0002519.1 mouse_genomes_project 6 42411211 42411826 + MGP_CBAJ_P0002636 Trbv30 TR_V_gene TR_V_gene MGP_CBAJ_T0015445.1 MGP_CBAJ_G0013557.1 mouse_genomes_project 6 164303395 164303807 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0076836.1 MGP_CBAJ_G0030330.1 mouse_genomes_project 6 43929508 43970953 - MGP_CBAJ_P0076836 Tcaf1 protein_coding protein_coding MGP_CBAJ_T0076837.1 MGP_CBAJ_G0030330.1 mouse_genomes_project 6 43931448 43953914 - MGP_CBAJ_P0076837 Tcaf1 protein_coding protein_coding MGP_CBAJ_T0076838.1 MGP_CBAJ_G0030330.1 mouse_genomes_project 6 43932535 43953886 - MGP_CBAJ_P0076838 Tcaf1 protein_coding protein_coding MGP_CBAJ_T0076839.1 MGP_CBAJ_G0030330.1 mouse_genomes_project 6 43937969 43953830 - Tcaf1 protein_coding retained_intron MGP_CBAJ_T0076840.1 MGP_CBAJ_G0030330.1 mouse_genomes_project 6 43940299 43970936 - Tcaf1 protein_coding processed_transcript MGP_CBAJ_T0076841.1 MGP_CBAJ_G0030330.1 mouse_genomes_project 6 43946065 43970936 - Tcaf1 protein_coding retained_intron MGP_CBAJ_T0076842.1 MGP_CBAJ_G0030330.1 mouse_genomes_project 6 43951125 43953835 - Tcaf1 protein_coding processed_transcript MGP_CBAJ_T0076843.1 MGP_CBAJ_G0030330.1 mouse_genomes_project 6 43969961 43970937 - Tcaf1 protein_coding processed_transcript MGP_CBAJ_T0079427.1 MGP_CBAJ_G0030876.1 mouse_genomes_project 6 132351513 132355153 + MGP_CBAJ_P0079427 Pex26 protein_coding protein_coding MGP_CBAJ_T0079428.1 MGP_CBAJ_G0030876.1 mouse_genomes_project 6 132351600 132364145 + MGP_CBAJ_P0079428 Pex26 protein_coding protein_coding MGP_CBAJ_T0079429.1 MGP_CBAJ_G0030876.1 mouse_genomes_project 6 132351609 132354793 + Pex26 protein_coding retained_intron MGP_CBAJ_T0079430.1 MGP_CBAJ_G0030876.1 mouse_genomes_project 6 132351976 132361575 + MGP_CBAJ_P0079430 Pex26 protein_coding protein_coding MGP_CBAJ_T0077476.1 MGP_CBAJ_G0030499.1 mouse_genomes_project 6 70032117 70205182 + MGP_CBAJ_P0077476 Prdm5 protein_coding protein_coding MGP_CBAJ_T0077477.1 MGP_CBAJ_G0030499.1 mouse_genomes_project 6 70032151 70097209 + Prdm5 protein_coding retained_intron MGP_CBAJ_T0077478.1 MGP_CBAJ_G0030499.1 mouse_genomes_project 6 70032151 70205179 + MGP_CBAJ_P0077478 Prdm5 protein_coding protein_coding MGP_CBAJ_T0077479.1 MGP_CBAJ_G0030499.1 mouse_genomes_project 6 70032154 70205104 + MGP_CBAJ_P0077479 Prdm5 protein_coding protein_coding MGP_CBAJ_T0077480.1 MGP_CBAJ_G0030499.1 mouse_genomes_project 6 70032223 70037979 + Prdm5 protein_coding retained_intron MGP_CBAJ_T0077481.1 MGP_CBAJ_G0030499.1 mouse_genomes_project 6 70032290 70204940 + MGP_CBAJ_P0077481 Prdm5 protein_coding protein_coding MGP_CBAJ_T0077482.1 MGP_CBAJ_G0030499.1 mouse_genomes_project 6 70203896 70205816 + Prdm5 protein_coding retained_intron MGP_CBAJ_T0008460.1 MGP_CBAJ_G0006837.1 mouse_genomes_project 6 35934695 35937083 - lincRNA lincRNA MGP_CBAJ_T0076022.1 MGP_CBAJ_G0030147.1 mouse_genomes_project 6 16257102 16298530 - MGP_CBAJ_P0076022 Wnt2 protein_coding protein_coding MGP_CBAJ_T0008539.1 MGP_CBAJ_G0006896.1 mouse_genomes_project 6 89491012 89509143 + Gm43878 lincRNA lincRNA MGP_CBAJ_T0008540.1 MGP_CBAJ_G0006896.1 mouse_genomes_project 6 89501348 89509155 + Gm43878 lincRNA lincRNA MGP_CBAJ_T0008541.1 MGP_CBAJ_G0006896.1 mouse_genomes_project 6 89501383 89511988 + Gm43878 lincRNA lincRNA MGP_CBAJ_T0008480.1 MGP_CBAJ_G0006848.1 mouse_genomes_project 6 50857107 50858139 + 4833403J16Rik lincRNA lincRNA MGP_CBAJ_T0100695.1 MGP_CBAJ_G0038950.1 mouse_genomes_project 6 126144415 126144553 - Gm24008 snoRNA snoRNA MGP_CBAJ_T0077948.1 MGP_CBAJ_G0030600.1 mouse_genomes_project 6 90283302 90331309 - Stambp protein_coding retained_intron MGP_CBAJ_T0077949.1 MGP_CBAJ_G0030600.1 mouse_genomes_project 6 90283308 90331315 - MGP_CBAJ_P0077949 Stambp protein_coding protein_coding MGP_CBAJ_T0077950.1 MGP_CBAJ_G0030600.1 mouse_genomes_project 6 90283315 90331611 - MGP_CBAJ_P0077950 Stambp protein_coding protein_coding MGP_CBAJ_T0077951.1 MGP_CBAJ_G0030600.1 mouse_genomes_project 6 90283445 90304335 - Stambp protein_coding retained_intron MGP_CBAJ_T0077952.1 MGP_CBAJ_G0030600.1 mouse_genomes_project 6 90283853 90331299 - MGP_CBAJ_P0077952 Stambp protein_coding protein_coding MGP_CBAJ_T0077953.1 MGP_CBAJ_G0030600.1 mouse_genomes_project 6 90303759 90304163 - Stambp protein_coding retained_intron MGP_CBAJ_T0077954.1 MGP_CBAJ_G0030600.1 mouse_genomes_project 6 90330014 90331321 - Stambp protein_coding retained_intron MGP_CBAJ_T0079966.1 MGP_CBAJ_G0030991.1 mouse_genomes_project 6 140778893 140829522 - MGP_CBAJ_P0079966 Pzp protein_coding protein_coding MGP_CBAJ_T0079967.1 MGP_CBAJ_G0030991.1 mouse_genomes_project 6 140780536 140782822 - Pzp protein_coding processed_transcript MGP_CBAJ_T0079968.1 MGP_CBAJ_G0030991.1 mouse_genomes_project 6 140788426 140790302 - Pzp protein_coding retained_intron MGP_CBAJ_T0079969.1 MGP_CBAJ_G0030991.1 mouse_genomes_project 6 140824025 140829505 - MGP_CBAJ_P0079969 Pzp protein_coding protein_coding MGP_CBAJ_T0077357.1 MGP_CBAJ_G0030464.1 mouse_genomes_project 6 60556490 60557470 - MGP_CBAJ_P0077357 Vmn1r17 protein_coding protein_coding MGP_CBAJ_T0015441.1 MGP_CBAJ_G0013553.1 mouse_genomes_project 6 162373193 162374006 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0077474.1 MGP_CBAJ_G0030498.1 mouse_genomes_project 6 69904815 69949702 + MGP_CBAJ_P0077474 Ndnf protein_coding protein_coding MGP_CBAJ_T0077475.1 MGP_CBAJ_G0030498.1 mouse_genomes_project 6 69938805 69940816 + Ndnf protein_coding retained_intron MGP_CBAJ_T0005032.1 MGP_CBAJ_G0004289.1 mouse_genomes_project 6 155714617 155719735 - Gm28523 antisense antisense MGP_CBAJ_T0078926.1 MGP_CBAJ_G0030789.1 mouse_genomes_project 6 123642667 123654790 - MGP_CBAJ_P0078926 Cidec protein_coding protein_coding MGP_CBAJ_T0078927.1 MGP_CBAJ_G0030789.1 mouse_genomes_project 6 123645581 123654669 - MGP_CBAJ_P0078927 Cidec protein_coding protein_coding MGP_CBAJ_T0080391.1 MGP_CBAJ_G0031116.1 mouse_genomes_project 6 156014237 156063585 + MGP_CBAJ_P0080391 Slco1c1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080392.1 MGP_CBAJ_G0031116.1 mouse_genomes_project 6 156014255 156063601 + MGP_CBAJ_P0080392 Slco1c1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080393.1 MGP_CBAJ_G0031116.1 mouse_genomes_project 6 156014256 156063409 + MGP_CBAJ_P0080393 Slco1c1 protein_coding protein_coding MGP_CBAJ_T0080394.1 MGP_CBAJ_G0031116.1 mouse_genomes_project 6 156014404 156063994 + MGP_CBAJ_P0080394 Slco1c1 protein_coding protein_coding MGP_CBAJ_T0080395.1 MGP_CBAJ_G0031116.1 mouse_genomes_project 6 156038615 156040915 + Slco1c1 protein_coding retained_intron MGP_CBAJ_T0078431.1 MGP_CBAJ_G0030689.1 mouse_genomes_project 6 97288707 97298593 + MGP_CBAJ_P0078431 Vmn1r44 protein_coding protein_coding MGP_CBAJ_T0078432.1 MGP_CBAJ_G0030689.1 mouse_genomes_project 6 97298285 97299393 + MGP_CBAJ_P0078432 Vmn1r44 protein_coding protein_coding MGP_CBAJ_T0002117.1 MGP_CBAJ_G0002032.1 mouse_genomes_project 6 146058593 146058906 - TEC TEC MGP_CBAJ_T0002038.1 MGP_CBAJ_G0001954.1 mouse_genomes_project 6 96736831 96738253 + TEC TEC MGP_CBAJ_T0076938.1 MGP_CBAJ_G0030361.1 mouse_genomes_project 6 50464328 50490709 + MGP_CBAJ_P0076938 Krba1 protein_coding protein_coding MGP_CBAJ_T0076939.1 MGP_CBAJ_G0030361.1 mouse_genomes_project 6 50464356 50488063 + MGP_CBAJ_P0076939 Krba1 protein_coding protein_coding MGP_CBAJ_T0076940.1 MGP_CBAJ_G0030361.1 mouse_genomes_project 6 50464372 50469427 + Krba1 protein_coding retained_intron MGP_CBAJ_T0076941.1 MGP_CBAJ_G0030361.1 mouse_genomes_project 6 50464374 50488058 + MGP_CBAJ_P0076941 Krba1 protein_coding protein_coding MGP_CBAJ_T0076942.1 MGP_CBAJ_G0030361.1 mouse_genomes_project 6 50464400 50490709 + MGP_CBAJ_P0076942 Krba1 protein_coding protein_coding MGP_CBAJ_T0076943.1 MGP_CBAJ_G0030361.1 mouse_genomes_project 6 50464440 50472222 + Krba1 protein_coding processed_transcript MGP_CBAJ_T0076944.1 MGP_CBAJ_G0030361.1 mouse_genomes_project 6 50464608 50488625 + MGP_CBAJ_P0076944 Krba1 protein_coding protein_coding MGP_CBAJ_T0076945.1 MGP_CBAJ_G0030361.1 mouse_genomes_project 6 50472797 50477296 + Krba1 protein_coding processed_transcript MGP_CBAJ_T0076946.1 MGP_CBAJ_G0030361.1 mouse_genomes_project 6 50477957 50490709 + Krba1 protein_coding retained_intron MGP_CBAJ_T0076947.1 MGP_CBAJ_G0030361.1 mouse_genomes_project 6 50482094 50490945 + Krba1 protein_coding retained_intron MGP_CBAJ_T0004991.1 MGP_CBAJ_G0004254.1 mouse_genomes_project 6 132091682 132092648 + Gm43916 antisense antisense MGP_CBAJ_T0015300.1 MGP_CBAJ_G0013412.1 mouse_genomes_project 6 113421486 113421938 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0079360.1 MGP_CBAJ_G0030865.1 mouse_genomes_project 6 131367828 131405658 - MGP_CBAJ_P0079360 Ccdc77 protein_coding protein_coding MGP_CBAJ_T0079361.1 MGP_CBAJ_G0030865.1 mouse_genomes_project 6 131367828 131418477 - MGP_CBAJ_P0079361 Ccdc77 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079362.1 MGP_CBAJ_G0030865.1 mouse_genomes_project 6 131368540 131405701 - MGP_CBAJ_P0079362 Ccdc77 protein_coding protein_coding MGP_CBAJ_T0079363.1 MGP_CBAJ_G0030865.1 mouse_genomes_project 6 131376355 131405639 - MGP_CBAJ_P0079363 Ccdc77 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079364.1 MGP_CBAJ_G0030865.1 mouse_genomes_project 6 131379322 131405596 - MGP_CBAJ_P0079364 Ccdc77 protein_coding protein_coding MGP_CBAJ_T0079365.1 MGP_CBAJ_G0030865.1 mouse_genomes_project 6 131379355 131405569 - MGP_CBAJ_P0079365 Ccdc77 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079366.1 MGP_CBAJ_G0030865.1 mouse_genomes_project 6 131382314 131405606 - Ccdc77 protein_coding retained_intron MGP_CBAJ_T0079367.1 MGP_CBAJ_G0030865.1 mouse_genomes_project 6 131389843 131394934 - Ccdc77 protein_coding retained_intron MGP_CBAJ_T0079368.1 MGP_CBAJ_G0030865.1 mouse_genomes_project 6 131394751 131418459 - MGP_CBAJ_P0079368 Ccdc77 protein_coding protein_coding MGP_CBAJ_T0079369.1 MGP_CBAJ_G0030865.1 mouse_genomes_project 6 131401987 131405596 - Ccdc77 protein_coding retained_intron MGP_CBAJ_T0008485.1 MGP_CBAJ_G0006852.1 mouse_genomes_project 6 53164794 53210591 + C530044C16Rik lincRNA lincRNA MGP_CBAJ_T0008486.1 MGP_CBAJ_G0006852.1 mouse_genomes_project 6 53165003 53210730 + C530044C16Rik lincRNA lincRNA MGP_CBAJ_T0076579.1 MGP_CBAJ_G0030254.1 mouse_genomes_project 6 38660445 38663521 - Atp6v0a4 protein_coding processed_transcript MGP_CBAJ_T0076580.1 MGP_CBAJ_G0030254.1 mouse_genomes_project 6 38660445 38724651 - MGP_CBAJ_P0076580 Atp6v0a4 protein_coding protein_coding MGP_CBAJ_T0076581.1 MGP_CBAJ_G0030254.1 mouse_genomes_project 6 38660445 38745353 - MGP_CBAJ_P0076581 Atp6v0a4 protein_coding protein_coding MGP_CBAJ_T0076582.1 MGP_CBAJ_G0030254.1 mouse_genomes_project 6 38663240 38667088 - Atp6v0a4 protein_coding retained_intron MGP_CBAJ_T0076583.1 MGP_CBAJ_G0030254.1 mouse_genomes_project 6 38690378 38694822 - Atp6v0a4 protein_coding retained_intron MGP_CBAJ_T0076584.1 MGP_CBAJ_G0030254.1 mouse_genomes_project 6 38700116 38708669 - Atp6v0a4 protein_coding retained_intron MGP_CBAJ_T0076585.1 MGP_CBAJ_G0030254.1 mouse_genomes_project 6 38705148 38745256 - Atp6v0a4 protein_coding retained_intron MGP_CBAJ_T0101167.1 MGP_CBAJ_G0039344.1 mouse_genomes_project 6 108847527 108848559 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101168.1 MGP_CBAJ_G0039344.1 mouse_genomes_project 6 108848430 108850644 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0002049.1 MGP_CBAJ_G0001965.1 mouse_genomes_project 6 99492073 99493123 - TEC TEC MGP_CBAJ_T0077348.1 MGP_CBAJ_G0030455.1 mouse_genomes_project 6 60156547 60157528 - MGP_CBAJ_P0077348 Vmn1r7 protein_coding protein_coding MGP_CBAJ_T0077158.1 MGP_CBAJ_G0030411.1 mouse_genomes_project 6 54764224 54766283 - MGP_CBAJ_P0077158 Hoxa4 protein_coding protein_coding MGP_CBAJ_T0101975.1 MGP_CBAJ_G0040006.1 mouse_genomes_project 6 39246415 39253959 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0076724.1 MGP_CBAJ_G0030284.1 mouse_genomes_project 6 41523743 41524756 + MGP_CBAJ_P0076724 Tas2r108 protein_coding protein_coding MGP_CBAJ_T0078089.1 MGP_CBAJ_G0030627.1 mouse_genomes_project 6 92970866 93016883 - MGP_CBAJ_P0078089 Nat8f4 protein_coding protein_coding MGP_CBAJ_T0078090.1 MGP_CBAJ_G0030627.1 mouse_genomes_project 6 92970866 93022048 - MGP_CBAJ_P0078090 Nat8f4 protein_coding protein_coding MGP_CBAJ_T0080421.1 MGP_CBAJ_G0031125.1 mouse_genomes_project 6 156912681 156931929 + MGP_CBAJ_P0080421 Pyroxd1 protein_coding protein_coding MGP_CBAJ_T0080422.1 MGP_CBAJ_G0031125.1 mouse_genomes_project 6 156912694 156914902 + Pyroxd1 protein_coding retained_intron MGP_CBAJ_T0080423.1 MGP_CBAJ_G0031125.1 mouse_genomes_project 6 156912705 156930723 + Pyroxd1 protein_coding retained_intron MGP_CBAJ_T0080424.1 MGP_CBAJ_G0031125.1 mouse_genomes_project 6 156913963 156926192 + Pyroxd1 protein_coding processed_transcript MGP_CBAJ_T0080426.1 MGP_CBAJ_G0031125.1 mouse_genomes_project 6 156919967 156921719 + Pyroxd1 protein_coding retained_intron MGP_CBAJ_T0015450.1 MGP_CBAJ_G0013562.1 mouse_genomes_project 6 164763276 164764140 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001993.1 MGP_CBAJ_G0001909.1 mouse_genomes_project 6 86541529 86543527 + TEC TEC MGP_CBAJ_T0015428.1 MGP_CBAJ_G0013540.1 mouse_genomes_project 6 154326584 154327090 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0102003.1 MGP_CBAJ_G0040034.1 mouse_genomes_project 6 69655673 69656929 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015277.1 MGP_CBAJ_G0013389.1 mouse_genomes_project 6 102829789 102830224 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002073.1 MGP_CBAJ_G0001989.1 mouse_genomes_project 6 110723769 110726484 + TEC TEC MGP_CBAJ_T0008619.1 MGP_CBAJ_G0006958.1 mouse_genomes_project 6 136079846 136081111 - 1700027F06Rik lincRNA lincRNA MGP_CBAJ_T0101990.1 MGP_CBAJ_G0040021.1 mouse_genomes_project 6 61145670 61146172 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0002148.1 MGP_CBAJ_G0002063.1 mouse_genomes_project 6 163574228 163577738 - TEC TEC MGP_CBAJ_T0102004.1 MGP_CBAJ_G0040035.1 mouse_genomes_project 6 69655676 69656929 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0080077.1 MGP_CBAJ_G0031029.1 mouse_genomes_project 6 143043143 143074912 - MGP_CBAJ_P0080077 Klra1 protein_coding protein_coding MGP_CBAJ_T0080078.1 MGP_CBAJ_G0031029.1 mouse_genomes_project 6 143043442 143057823 - Klra1 protein_coding retained_intron MGP_CBAJ_T0080099.1 MGP_CBAJ_G0031035.1 mouse_genomes_project 6 144405097 144417681 + MGP_CBAJ_P0080099 protein_coding protein_coding MGP_CBAJ_T0079609.1 MGP_CBAJ_G0030924.1 mouse_genomes_project 6 136438659 136453651 - MGP_CBAJ_P0079609 Ptpn6 protein_coding protein_coding MGP_CBAJ_T0079610.1 MGP_CBAJ_G0030924.1 mouse_genomes_project 6 136438659 136461767 - MGP_CBAJ_P0079610 Ptpn6 protein_coding protein_coding MGP_CBAJ_T0079611.1 MGP_CBAJ_G0030924.1 mouse_genomes_project 6 136438659 136461678 - MGP_CBAJ_P0079611 Ptpn6 protein_coding protein_coding MGP_CBAJ_T0079612.1 MGP_CBAJ_G0030924.1 mouse_genomes_project 6 136438672 136439795 - MGP_CBAJ_P0079612 Ptpn6 protein_coding protein_coding MGP_CBAJ_T0079613.1 MGP_CBAJ_G0030924.1 mouse_genomes_project 6 136439060 136461637 - MGP_CBAJ_P0079613 Ptpn6 protein_coding protein_coding MGP_CBAJ_T0079614.1 MGP_CBAJ_G0030924.1 mouse_genomes_project 6 136445786 136447958 - MGP_CBAJ_P0079614 Ptpn6 protein_coding protein_coding MGP_CBAJ_T0079615.1 MGP_CBAJ_G0030924.1 mouse_genomes_project 6 136445834 136447908 - MGP_CBAJ_P0079615 Ptpn6 protein_coding protein_coding MGP_CBAJ_T0079616.1 MGP_CBAJ_G0030924.1 mouse_genomes_project 6 136448243 136449205 - Ptpn6 protein_coding retained_intron MGP_CBAJ_T0079617.1 MGP_CBAJ_G0030924.1 mouse_genomes_project 6 136449397 136453268 - Ptpn6 protein_coding processed_transcript MGP_CBAJ_T0079618.1 MGP_CBAJ_G0030924.1 mouse_genomes_project 6 136452858 136453579 - MGP_CBAJ_P0079618 Ptpn6 protein_coding protein_coding MGP_CBAJ_T0079619.1 MGP_CBAJ_G0030924.1 mouse_genomes_project 6 136453151 136453607 - Ptpn6 protein_coding retained_intron MGP_CBAJ_T0015437.1 MGP_CBAJ_G0013549.1 mouse_genomes_project 6 160220955 160221951 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001994.1 MGP_CBAJ_G0001910.1 mouse_genomes_project 6 86597819 86601369 + TEC TEC MGP_CBAJ_T0015299.1 MGP_CBAJ_G0013411.1 mouse_genomes_project 6 113018173 113018553 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0079739.1 MGP_CBAJ_G0030944.1 mouse_genomes_project 6 136783270 136795801 + MGP_CBAJ_P0079739 Ing4 protein_coding protein_coding MGP_CBAJ_T0079740.1 MGP_CBAJ_G0030944.1 mouse_genomes_project 6 136783346 136792978 + Ing4 protein_coding retained_intron MGP_CBAJ_T0079741.1 MGP_CBAJ_G0030944.1 mouse_genomes_project 6 136783346 136796063 + MGP_CBAJ_P0079741 Ing4 protein_coding protein_coding MGP_CBAJ_T0079742.1 MGP_CBAJ_G0030944.1 mouse_genomes_project 6 136783358 136794371 + Ing4 protein_coding retained_intron MGP_CBAJ_T0079743.1 MGP_CBAJ_G0030944.1 mouse_genomes_project 6 136783371 136795607 + Ing4 protein_coding retained_intron MGP_CBAJ_T0079744.1 MGP_CBAJ_G0030944.1 mouse_genomes_project 6 136783371 136796064 + MGP_CBAJ_P0079744 Ing4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079745.1 MGP_CBAJ_G0030944.1 mouse_genomes_project 6 136787325 136794805 + Ing4 protein_coding retained_intron MGP_CBAJ_T0079746.1 MGP_CBAJ_G0030944.1 mouse_genomes_project 6 136792314 136796064 + Ing4 protein_coding retained_intron MGP_CBAJ_T0079747.1 MGP_CBAJ_G0030944.1 mouse_genomes_project 6 136794438 136795417 + Ing4 protein_coding retained_intron MGP_CBAJ_T0004990.1 MGP_CBAJ_G0004253.1 mouse_genomes_project 6 131595414 131599886 + antisense antisense MGP_CBAJ_T0102006.1 MGP_CBAJ_G0040037.1 mouse_genomes_project 6 71140015 71140915 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0079573.1 MGP_CBAJ_G0030914.1 mouse_genomes_project 6 136166645 136210678 - MGP_CBAJ_P0079573 Clstn3 protein_coding protein_coding MGP_CBAJ_T0079574.1 MGP_CBAJ_G0030914.1 mouse_genomes_project 6 136167198 136169398 - Clstn3 protein_coding processed_transcript MGP_CBAJ_T0079575.1 MGP_CBAJ_G0030914.1 mouse_genomes_project 6 136172666 136174774 - Clstn3 protein_coding retained_intron MGP_CBAJ_T0079576.1 MGP_CBAJ_G0030914.1 mouse_genomes_project 6 136174798 136195153 - Clstn3 protein_coding retained_intron MGP_CBAJ_T0079577.1 MGP_CBAJ_G0030914.1 mouse_genomes_project 6 136201202 136204079 - Clstn3 protein_coding processed_transcript MGP_CBAJ_T0079578.1 MGP_CBAJ_G0030914.1 mouse_genomes_project 6 136207803 136210295 - MGP_CBAJ_P0079578 Clstn3 protein_coding protein_coding MGP_CBAJ_T0080604.1 MGP_CBAJ_G0031155.1 mouse_genomes_project 6 161820308 161829809 + protein_coding processed_transcript MGP_CBAJ_T0080605.1 MGP_CBAJ_G0031155.1 mouse_genomes_project 6 161820318 161863976 + MGP_CBAJ_P0080605 protein_coding protein_coding MGP_CBAJ_T0080606.1 MGP_CBAJ_G0031155.1 mouse_genomes_project 6 161829760 161862967 + MGP_CBAJ_P0080606 protein_coding protein_coding MGP_CBAJ_T0080607.1 MGP_CBAJ_G0031155.1 mouse_genomes_project 6 161829760 161862967 + MGP_CBAJ_P0080607 protein_coding protein_coding MGP_CBAJ_T0080608.1 MGP_CBAJ_G0031155.1 mouse_genomes_project 6 161829760 161862967 + MGP_CBAJ_P0080608 protein_coding protein_coding MGP_CBAJ_T0080609.1 MGP_CBAJ_G0031155.1 mouse_genomes_project 6 161829760 161862967 + MGP_CBAJ_P0080609 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080610.1 MGP_CBAJ_G0031155.1 mouse_genomes_project 6 161829760 161862967 + MGP_CBAJ_P0080610 protein_coding unknown_likely_coding MGP_CBAJ_T0080611.1 MGP_CBAJ_G0031155.1 mouse_genomes_project 6 161847412 161850114 + protein_coding retained_intron MGP_CBAJ_T0080612.1 MGP_CBAJ_G0031155.1 mouse_genomes_project 6 161849572 161850837 + protein_coding retained_intron MGP_CBAJ_T0080613.1 MGP_CBAJ_G0031155.1 mouse_genomes_project 6 161860848 161863969 + protein_coding retained_intron MGP_CBAJ_T0015257.1 MGP_CBAJ_G0013369.1 mouse_genomes_project 6 93068102 93068800 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018017.1 MGP_CBAJ_G0015376.1 mouse_genomes_project 6 60694449 60889283 + processed_transcript processed_transcript MGP_CBAJ_T0080005.1 MGP_CBAJ_G0031004.1 mouse_genomes_project 6 141776924 141785038 - MGP_CBAJ_P0080005 Cd69 protein_coding protein_coding MGP_CBAJ_T0080006.1 MGP_CBAJ_G0031004.1 mouse_genomes_project 6 141777858 141784968 - MGP_CBAJ_P0080006 Cd69 protein_coding protein_coding MGP_CBAJ_T0080007.1 MGP_CBAJ_G0031004.1 mouse_genomes_project 6 141779050 141784971 - Cd69 protein_coding retained_intron MGP_CBAJ_T0080008.1 MGP_CBAJ_G0031004.1 mouse_genomes_project 6 141780001 141784971 - Cd69 protein_coding retained_intron MGP_CBAJ_T0080009.1 MGP_CBAJ_G0031004.1 mouse_genomes_project 6 141780766 141784971 - Cd69 protein_coding retained_intron MGP_CBAJ_T0077304.1 MGP_CBAJ_G0030445.1 mouse_genomes_project 6 59007438 59022474 + MGP_CBAJ_P0077304 Ppp1r17 protein_coding protein_coding MGP_CBAJ_T0001969.1 MGP_CBAJ_G0001885.1 mouse_genomes_project 6 77170908 77173697 + TEC TEC MGP_CBAJ_T0004830.1 MGP_CBAJ_G0004143.1 mouse_genomes_project 6 16579758 16605824 - Gm15592 antisense antisense MGP_CBAJ_T0008668.1 MGP_CBAJ_G0006992.1 mouse_genomes_project 6 160208754 160214353 + 2010013B24Rik lincRNA lincRNA MGP_CBAJ_T0004952.1 MGP_CBAJ_G0004228.1 mouse_genomes_project 6 98690950 98691494 - Gm14573 antisense antisense MGP_CBAJ_T0004908.1 MGP_CBAJ_G0004203.1 mouse_genomes_project 6 89824493 89826371 + Gm44287 antisense antisense MGP_CBAJ_T0008602.1 MGP_CBAJ_G0006943.1 mouse_genomes_project 6 127791459 127793495 + D030044L04Rik lincRNA lincRNA MGP_CBAJ_T0077727.1 MGP_CBAJ_G0030555.1 mouse_genomes_project 6 78890738 78924025 + MGP_CBAJ_P0077727 Suclg1 protein_coding protein_coding MGP_CBAJ_T0077728.1 MGP_CBAJ_G0030555.1 mouse_genomes_project 6 78891008 78906583 + MGP_CBAJ_P0077728 Suclg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077729.1 MGP_CBAJ_G0030555.1 mouse_genomes_project 6 78891016 78924018 + MGP_CBAJ_P0077729 Suclg1 protein_coding protein_coding MGP_CBAJ_T0077730.1 MGP_CBAJ_G0030555.1 mouse_genomes_project 6 78891017 78899779 + Suclg1 protein_coding processed_transcript MGP_CBAJ_T0077731.1 MGP_CBAJ_G0030555.1 mouse_genomes_project 6 78891024 78905356 + Suclg1 protein_coding retained_intron MGP_CBAJ_T0077732.1 MGP_CBAJ_G0030555.1 mouse_genomes_project 6 78902665 78906579 + Suclg1 protein_coding retained_intron MGP_CBAJ_T0099418.1 MGP_CBAJ_G0037673.1 mouse_genomes_project 6 25698353 25698493 - Gm24691 snRNA snRNA MGP_CBAJ_T0011500.1 MGP_CBAJ_G0009638.1 mouse_genomes_project 6 15922495 15922751 + Gm27542 misc_RNA misc_RNA MGP_CBAJ_T0101993.1 MGP_CBAJ_G0040024.1 mouse_genomes_project 6 61360698 61361608 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0001906.1 MGP_CBAJ_G0001822.1 mouse_genomes_project 6 29911443 29913665 + TEC TEC MGP_CBAJ_T0001972.1 MGP_CBAJ_G0001888.1 mouse_genomes_project 6 77560645 77563258 + TEC TEC MGP_CBAJ_T0080558.1 MGP_CBAJ_G0031148.1 mouse_genomes_project 6 160902028 160936625 + MGP_CBAJ_P0080558 Sspn protein_coding protein_coding MGP_CBAJ_T0080559.1 MGP_CBAJ_G0031148.1 mouse_genomes_project 6 160905585 160936625 + MGP_CBAJ_P0080559 Sspn protein_coding protein_coding MGP_CBAJ_T0080560.1 MGP_CBAJ_G0031148.1 mouse_genomes_project 6 160924823 160936625 + MGP_CBAJ_P0080560 Sspn protein_coding protein_coding MGP_CBAJ_T0079527.1 MGP_CBAJ_G0030898.1 mouse_genomes_project 6 134445625 134468756 + MGP_CBAJ_P0079527 Clec4a3 protein_coding protein_coding MGP_CBAJ_T0079528.1 MGP_CBAJ_G0030898.1 mouse_genomes_project 6 134445754 134468755 + MGP_CBAJ_P0079528 Clec4a3 protein_coding protein_coding MGP_CBAJ_T0079529.1 MGP_CBAJ_G0030898.1 mouse_genomes_project 6 134445888 134456891 + MGP_CBAJ_P0079529 Clec4a3 protein_coding protein_coding MGP_CBAJ_T0015442.1 MGP_CBAJ_G0013554.1 mouse_genomes_project 6 163472928 163473331 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0077783.1 MGP_CBAJ_G0030569.1 mouse_genomes_project 6 88641463 88698321 + MGP_CBAJ_P0077783 Eva1a protein_coding protein_coding MGP_CBAJ_T0077784.1 MGP_CBAJ_G0030569.1 mouse_genomes_project 6 88642043 88699525 + MGP_CBAJ_P0077784 Eva1a protein_coding protein_coding MGP_CBAJ_T0077785.1 MGP_CBAJ_G0030569.1 mouse_genomes_project 6 88642108 88647559 + Eva1a protein_coding processed_transcript MGP_CBAJ_T0077786.1 MGP_CBAJ_G0030569.1 mouse_genomes_project 6 88652697 88698586 + MGP_CBAJ_P0077786 Eva1a protein_coding protein_coding MGP_CBAJ_T0000156.1 MGP_CBAJ_G0000119.1 mouse_genomes_project 6 73179352 73179818 + MGP_CBAJ_P0000156 Igkv14-100 IG_V_gene IG_V_gene MGP_CBAJ_T0000157.1 MGP_CBAJ_G0000119.1 mouse_genomes_project 6 73179352 73179818 + MGP_CBAJ_P0000157 Igkv14-100 IG_V_gene IG_V_gene MGP_CBAJ_T0004924.1 MGP_CBAJ_G0004212.1 mouse_genomes_project 6 93574894 93577640 - Gm44941 antisense antisense MGP_CBAJ_T0077382.1 MGP_CBAJ_G0030474.1 mouse_genomes_project 6 61180307 61180792 - MGP_CBAJ_P0077382 protein_coding protein_coding MGP_CBAJ_T0008481.1 MGP_CBAJ_G0006849.1 mouse_genomes_project 6 50907742 50908289 - Gm44019 lincRNA lincRNA MGP_CBAJ_T0098443.1 MGP_CBAJ_G0036705.1 mouse_genomes_project 6 124068938 124070817 - Gm44167 sense_intronic sense_intronic MGP_CBAJ_T0015150.1 MGP_CBAJ_G0013262.1 mouse_genomes_project 6 64701770 64702656 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002543.1 MGP_CBAJ_G0002446.1 mouse_genomes_project 6 42772800 42772848 + TR_J_pseudogene TR_J_pseudogene MGP_CBAJ_T0077843.1 MGP_CBAJ_G0030580.1 mouse_genomes_project 6 89763656 89765558 - MGP_CBAJ_P0077843 Tlx2 protein_coding protein_coding MGP_CBAJ_T0077844.1 MGP_CBAJ_G0030580.1 mouse_genomes_project 6 89763923 89765626 - MGP_CBAJ_P0077844 Tlx2 protein_coding protein_coding MGP_CBAJ_T0078443.1 MGP_CBAJ_G0030697.1 mouse_genomes_project 6 97692557 97693679 - MGP_CBAJ_P0078443 Vmn1r53 protein_coding protein_coding MGP_CBAJ_T0076391.1 MGP_CBAJ_G0030219.1 mouse_genomes_project 6 30587824 30787643 - MGP_CBAJ_P0076391 Copg2 protein_coding protein_coding MGP_CBAJ_T0076392.1 MGP_CBAJ_G0030219.1 mouse_genomes_project 6 30588682 30787698 - MGP_CBAJ_P0076392 Copg2 protein_coding protein_coding MGP_CBAJ_T0076393.1 MGP_CBAJ_G0030219.1 mouse_genomes_project 6 30704999 30787614 - Copg2 protein_coding processed_transcript MGP_CBAJ_T0076394.1 MGP_CBAJ_G0030219.1 mouse_genomes_project 6 30705489 30787668 - Copg2 protein_coding processed_transcript MGP_CBAJ_T0076395.1 MGP_CBAJ_G0030219.1 mouse_genomes_project 6 30745218 30787634 - Copg2 protein_coding processed_transcript MGP_CBAJ_T0076396.1 MGP_CBAJ_G0030219.1 mouse_genomes_project 6 30745594 30787330 - Copg2 protein_coding processed_transcript MGP_CBAJ_T0076397.1 MGP_CBAJ_G0030219.1 mouse_genomes_project 6 30785801 30787341 - Copg2 protein_coding processed_transcript MGP_CBAJ_T0076398.1 MGP_CBAJ_G0030219.1 mouse_genomes_project 6 30787019 30787652 - Copg2 protein_coding processed_transcript MGP_CBAJ_T0015018.1 MGP_CBAJ_G0013130.1 mouse_genomes_project 6 5010746 5011134 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0078475.1 MGP_CBAJ_G0030706.1 mouse_genomes_project 6 98103463 98145395 + MGP_CBAJ_P0078475 Slc41a3 protein_coding protein_coding MGP_CBAJ_T0078476.1 MGP_CBAJ_G0030706.1 mouse_genomes_project 6 98103730 98145401 + MGP_CBAJ_P0078476 Slc41a3 protein_coding unknown_likely_coding MGP_CBAJ_T0078477.1 MGP_CBAJ_G0030706.1 mouse_genomes_project 6 98117887 98145395 + MGP_CBAJ_P0078477 Slc41a3 protein_coding protein_coding MGP_CBAJ_T0001880.1 MGP_CBAJ_G0001796.1 mouse_genomes_project 6 4004073 4006097 - TEC TEC MGP_CBAJ_T0010657.1 MGP_CBAJ_G0008795.1 mouse_genomes_project 6 90133610 90133717 - Mir6374 miRNA miRNA MGP_CBAJ_T0077445.1 MGP_CBAJ_G0030493.1 mouse_genomes_project 6 68819050 68821172 + MGP_CBAJ_P0077445 Atoh1 protein_coding protein_coding MGP_CBAJ_T0080218.1 MGP_CBAJ_G0031083.1 mouse_genomes_project 6 149247660 149754245 - MGP_CBAJ_P0080218 Grin2b protein_coding protein_coding MGP_CBAJ_T0080219.1 MGP_CBAJ_G0031083.1 mouse_genomes_project 6 149264005 149754223 - MGP_CBAJ_P0080219 Grin2b protein_coding protein_coding MGP_CBAJ_T0080220.1 MGP_CBAJ_G0031083.1 mouse_genomes_project 6 149416291 149754223 - MGP_CBAJ_P0080220 Grin2b protein_coding protein_coding MGP_CBAJ_T0080221.1 MGP_CBAJ_G0031083.1 mouse_genomes_project 6 149609755 149753008 - MGP_CBAJ_P0080221 Grin2b protein_coding protein_coding MGP_CBAJ_T0080222.1 MGP_CBAJ_G0031083.1 mouse_genomes_project 6 149609758 149754057 - MGP_CBAJ_P0080222 Grin2b protein_coding protein_coding MGP_CBAJ_T0010693.1 MGP_CBAJ_G0008831.1 mouse_genomes_project 6 141443374 141443430 - Mir7649 miRNA miRNA MGP_CBAJ_T0015282.1 MGP_CBAJ_G0013394.1 mouse_genomes_project 6 105691537 105696190 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0077764.1 MGP_CBAJ_G0030566.1 mouse_genomes_project 6 86308508 87213208 + MGP_CBAJ_P0077764 Lrrtm4 protein_coding protein_coding MGP_CBAJ_T0077765.1 MGP_CBAJ_G0030566.1 mouse_genomes_project 6 86308519 86311480 + MGP_CBAJ_P0077765 Lrrtm4 protein_coding protein_coding MGP_CBAJ_T0077766.1 MGP_CBAJ_G0030566.1 mouse_genomes_project 6 86308549 87212388 + MGP_CBAJ_P0077766 Lrrtm4 protein_coding protein_coding MGP_CBAJ_T0077767.1 MGP_CBAJ_G0030566.1 mouse_genomes_project 6 86308549 86314649 + MGP_CBAJ_P0077767 Lrrtm4 protein_coding protein_coding MGP_CBAJ_T0077768.1 MGP_CBAJ_G0030566.1 mouse_genomes_project 6 86308642 87213206 + MGP_CBAJ_P0077768 Lrrtm4 protein_coding protein_coding MGP_CBAJ_T0077769.1 MGP_CBAJ_G0030566.1 mouse_genomes_project 6 86308679 86315634 + MGP_CBAJ_P0077769 Lrrtm4 protein_coding protein_coding MGP_CBAJ_T0077770.1 MGP_CBAJ_G0030566.1 mouse_genomes_project 6 86308982 86311647 + MGP_CBAJ_P0077770 Lrrtm4 protein_coding protein_coding MGP_CBAJ_T0077771.1 MGP_CBAJ_G0030566.1 mouse_genomes_project 6 86309375 86314657 + MGP_CBAJ_P0077771 Lrrtm4 protein_coding protein_coding MGP_CBAJ_T0000280.1 MGP_CBAJ_G0000225.1 mouse_genomes_project 6 73475289 73475700 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0077675.1 MGP_CBAJ_G0030545.1 mouse_genomes_project 6 77950559 77957111 - MGP_CBAJ_P0077675 Mat2a protein_coding protein_coding MGP_CBAJ_T0077676.1 MGP_CBAJ_G0030545.1 mouse_genomes_project 6 77950559 77957113 - MGP_CBAJ_P0077676 Mat2a protein_coding protein_coding MGP_CBAJ_T0077677.1 MGP_CBAJ_G0030545.1 mouse_genomes_project 6 77952092 77957111 - MGP_CBAJ_P0077677 Mat2a protein_coding protein_coding MGP_CBAJ_T0077678.1 MGP_CBAJ_G0030545.1 mouse_genomes_project 6 77953358 77956943 - MGP_CBAJ_P0077678 Mat2a protein_coding protein_coding MGP_CBAJ_T0077679.1 MGP_CBAJ_G0030545.1 mouse_genomes_project 6 77953964 77957095 - Mat2a protein_coding retained_intron MGP_CBAJ_T0077680.1 MGP_CBAJ_G0030545.1 mouse_genomes_project 6 77954295 77957098 - Mat2a protein_coding retained_intron MGP_CBAJ_T0077681.1 MGP_CBAJ_G0030545.1 mouse_genomes_project 6 77954949 77957103 - Mat2a protein_coding processed_transcript MGP_CBAJ_T0077682.1 MGP_CBAJ_G0030545.1 mouse_genomes_project 6 77956356 77957111 - Mat2a protein_coding retained_intron MGP_CBAJ_T0004916.1 MGP_CBAJ_G0004206.1 mouse_genomes_project 6 90559879 90560966 - 1700124L16Rik antisense antisense MGP_CBAJ_T0004917.1 MGP_CBAJ_G0004206.1 mouse_genomes_project 6 90559879 90560989 - 1700124L16Rik antisense antisense MGP_CBAJ_T0004918.1 MGP_CBAJ_G0004206.1 mouse_genomes_project 6 90559879 90560632 - 1700124L16Rik antisense antisense MGP_CBAJ_T0008461.1 MGP_CBAJ_G0006838.1 mouse_genomes_project 6 36608875 36809650 - lincRNA lincRNA MGP_CBAJ_T0008462.1 MGP_CBAJ_G0006838.1 mouse_genomes_project 6 36611242 36676366 - lincRNA lincRNA MGP_CBAJ_T0008463.1 MGP_CBAJ_G0006838.1 mouse_genomes_project 6 36669729 36809891 - lincRNA lincRNA MGP_CBAJ_T0008464.1 MGP_CBAJ_G0006838.1 mouse_genomes_project 6 36748608 36810033 - lincRNA lincRNA MGP_CBAJ_T0008465.1 MGP_CBAJ_G0006838.1 mouse_genomes_project 6 36809177 36810087 - lincRNA lincRNA MGP_CBAJ_T0008466.1 MGP_CBAJ_G0006838.1 mouse_genomes_project 6 36809179 36811990 - lincRNA lincRNA MGP_CBAJ_T0008467.1 MGP_CBAJ_G0006838.1 mouse_genomes_project 6 36809186 36810716 - lincRNA lincRNA MGP_CBAJ_T0008468.1 MGP_CBAJ_G0006838.1 mouse_genomes_project 6 36809464 36811226 - lincRNA lincRNA MGP_CBAJ_T0008469.1 MGP_CBAJ_G0006838.1 mouse_genomes_project 6 36809538 36810857 - lincRNA lincRNA MGP_CBAJ_T0076108.1 MGP_CBAJ_G0030165.1 mouse_genomes_project 6 22951891 22952791 - MGP_CBAJ_P0076108 Tas2r118 protein_coding protein_coding MGP_CBAJ_T0005049.1 MGP_CBAJ_G0004304.1 mouse_genomes_project 6 163200606 163241013 - Far2os2 antisense antisense MGP_CBAJ_T0010642.1 MGP_CBAJ_G0008780.1 mouse_genomes_project 6 52946381 52946492 + Mir6371 miRNA miRNA MGP_CBAJ_T0080012.1 MGP_CBAJ_G0031006.1 mouse_genomes_project 6 141865209 141888081 + MGP_CBAJ_P0080012 Clec12a protein_coding protein_coding MGP_CBAJ_T0080013.1 MGP_CBAJ_G0031006.1 mouse_genomes_project 6 141874390 141882366 + Clec12a protein_coding retained_intron MGP_CBAJ_T0080014.1 MGP_CBAJ_G0031006.1 mouse_genomes_project 6 141874612 141893973 + MGP_CBAJ_P0080014 Clec12a protein_coding protein_coding MGP_CBAJ_T0080015.1 MGP_CBAJ_G0031006.1 mouse_genomes_project 6 141885543 141893086 + Clec12a protein_coding retained_intron MGP_CBAJ_T0001914.1 MGP_CBAJ_G0001830.1 mouse_genomes_project 6 36585878 36588282 - TEC TEC MGP_CBAJ_T0002126.1 MGP_CBAJ_G0002041.1 mouse_genomes_project 6 150783357 150784165 + TEC TEC MGP_CBAJ_T0002070.1 MGP_CBAJ_G0001986.1 mouse_genomes_project 6 110089538 110090497 - TEC TEC MGP_CBAJ_T0005004.1 MGP_CBAJ_G0004266.1 mouse_genomes_project 6 138827563 138830367 + Gm42574 antisense antisense MGP_CBAJ_T0004993.1 MGP_CBAJ_G0004256.1 mouse_genomes_project 6 132399426 132401766 - Gm15856 antisense antisense MGP_CBAJ_T0080521.1 MGP_CBAJ_G0031141.1 mouse_genomes_project 6 160067660 160099667 - Casc1 protein_coding retained_intron MGP_CBAJ_T0080522.1 MGP_CBAJ_G0031141.1 mouse_genomes_project 6 160067660 160105391 - MGP_CBAJ_P0080522 Casc1 protein_coding protein_coding MGP_CBAJ_T0080523.1 MGP_CBAJ_G0031141.1 mouse_genomes_project 6 160067660 160105212 - MGP_CBAJ_P0080523 Casc1 protein_coding protein_coding MGP_CBAJ_T0080524.1 MGP_CBAJ_G0031141.1 mouse_genomes_project 6 160067768 160105295 - MGP_CBAJ_P0080524 Casc1 protein_coding protein_coding MGP_CBAJ_T0080525.1 MGP_CBAJ_G0031141.1 mouse_genomes_project 6 160084580 160105320 - Casc1 protein_coding retained_intron MGP_CBAJ_T0080526.1 MGP_CBAJ_G0031141.1 mouse_genomes_project 6 160087231 160105290 - Casc1 protein_coding processed_transcript MGP_CBAJ_T0080527.1 MGP_CBAJ_G0031141.1 mouse_genomes_project 6 160097205 160105300 - Casc1 protein_coding retained_intron MGP_CBAJ_T0080528.1 MGP_CBAJ_G0031141.1 mouse_genomes_project 6 160098587 160105330 - Casc1 protein_coding retained_intron MGP_CBAJ_T0080529.1 MGP_CBAJ_G0031141.1 mouse_genomes_project 6 160102405 160105426 - Casc1 protein_coding retained_intron MGP_CBAJ_T0101362.1 MGP_CBAJ_G0039439.1 mouse_genomes_project 6 144045810 144064279 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0008567.1 MGP_CBAJ_G0006914.1 mouse_genomes_project 6 97945162 97946920 - Gm44117 lincRNA lincRNA MGP_CBAJ_T0078416.1 MGP_CBAJ_G0030682.1 mouse_genomes_project 6 96707838 96749370 - MGP_CBAJ_P0078416 Plxna1 protein_coding protein_coding MGP_CBAJ_T0078417.1 MGP_CBAJ_G0030682.1 mouse_genomes_project 6 96712327 96712793 - Plxna1 protein_coding retained_intron MGP_CBAJ_T0078418.1 MGP_CBAJ_G0030682.1 mouse_genomes_project 6 96714218 96716337 - MGP_CBAJ_P0078418 Plxna1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078419.1 MGP_CBAJ_G0030682.1 mouse_genomes_project 6 96722081 96724775 - Plxna1 protein_coding processed_transcript MGP_CBAJ_T0078420.1 MGP_CBAJ_G0030682.1 mouse_genomes_project 6 96727115 96734294 - MGP_CBAJ_P0078420 Plxna1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0015190.1 MGP_CBAJ_G0013302.1 mouse_genomes_project 6 71839338 71839920 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0080450.1 MGP_CBAJ_G0031132.1 mouse_genomes_project 6 157174675 157320060 - MGP_CBAJ_P0080450 Abcc9 protein_coding protein_coding MGP_CBAJ_T0080451.1 MGP_CBAJ_G0031132.1 mouse_genomes_project 6 157174675 157320004 - MGP_CBAJ_P0080451 Abcc9 protein_coding protein_coding MGP_CBAJ_T0080452.1 MGP_CBAJ_G0031132.1 mouse_genomes_project 6 157174675 157320060 - MGP_CBAJ_P0080452 Abcc9 protein_coding protein_coding MGP_CBAJ_T0080453.1 MGP_CBAJ_G0031132.1 mouse_genomes_project 6 157175944 157320004 - MGP_CBAJ_P0080453 Abcc9 protein_coding protein_coding MGP_CBAJ_T0080454.1 MGP_CBAJ_G0031132.1 mouse_genomes_project 6 157189795 157320059 - MGP_CBAJ_P0080454 Abcc9 protein_coding protein_coding MGP_CBAJ_T0080455.1 MGP_CBAJ_G0031132.1 mouse_genomes_project 6 157309807 157320101 - MGP_CBAJ_P0080455 Abcc9 protein_coding protein_coding MGP_CBAJ_T0078136.1 MGP_CBAJ_G0030636.1 mouse_genomes_project 6 93573660 93581712 + MGP_CBAJ_P0078136 Snrpg protein_coding protein_coding MGP_CBAJ_T0078137.1 MGP_CBAJ_G0030636.1 mouse_genomes_project 6 93573898 93579106 + Snrpg protein_coding retained_intron MGP_CBAJ_T0078138.1 MGP_CBAJ_G0030636.1 mouse_genomes_project 6 93573927 93581291 + Snrpg protein_coding processed_transcript MGP_CBAJ_T0078139.1 MGP_CBAJ_G0030636.1 mouse_genomes_project 6 93573960 93581242 + Snrpg protein_coding processed_transcript MGP_CBAJ_T0001932.1 MGP_CBAJ_G0001848.1 mouse_genomes_project 6 46998156 47000316 + TEC TEC MGP_CBAJ_T0015102.1 MGP_CBAJ_G0013214.1 mouse_genomes_project 6 48366257 48367248 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0102020.1 MGP_CBAJ_G0040051.1 mouse_genomes_project 6 135590637 135597664 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015110.1 MGP_CBAJ_G0013222.1 mouse_genomes_project 6 50759537 50759995 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015184.1 MGP_CBAJ_G0013296.1 mouse_genomes_project 6 71415540 71415835 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0077172.1 MGP_CBAJ_G0030416.1 mouse_genomes_project 6 54809683 54813426 - MGP_CBAJ_P0077172 Hoxa10 protein_coding protein_coding MGP_CBAJ_T0077173.1 MGP_CBAJ_G0030416.1 mouse_genomes_project 6 54809685 54811811 - Hoxa10 protein_coding processed_transcript MGP_CBAJ_T0077174.1 MGP_CBAJ_G0030416.1 mouse_genomes_project 6 54810408 54819337 - MGP_CBAJ_P0077174 Hoxa10 protein_coding protein_coding MGP_CBAJ_T0077175.1 MGP_CBAJ_G0030416.1 mouse_genomes_project 6 54810568 54819278 - Hoxa10 protein_coding processed_transcript MGP_CBAJ_T0008408.1 MGP_CBAJ_G0006801.1 mouse_genomes_project 6 11658261 11874950 + lincRNA lincRNA MGP_CBAJ_T0008409.1 MGP_CBAJ_G0006801.1 mouse_genomes_project 6 11658304 11682598 + lincRNA lincRNA MGP_CBAJ_T0080103.1 MGP_CBAJ_G0031039.1 mouse_genomes_project 6 144649170 144650079 - MGP_CBAJ_P0080103 Tas2r104 protein_coding protein_coding MGP_CBAJ_T0010661.1 MGP_CBAJ_G0008799.1 mouse_genomes_project 6 93804473 93804535 - Gm22184 miRNA miRNA MGP_CBAJ_T0002145.1 MGP_CBAJ_G0002060.1 mouse_genomes_project 6 161876805 161877732 - TEC TEC MGP_CBAJ_T0100708.1 MGP_CBAJ_G0038963.1 mouse_genomes_project 6 136961588 136961913 - Scarna10 snoRNA snoRNA MGP_CBAJ_T0080668.1 MGP_CBAJ_G0031167.1 mouse_genomes_project 6 163444136 163666362 - MGP_CBAJ_P0080668 Tmtc1 protein_coding protein_coding MGP_CBAJ_T0080669.1 MGP_CBAJ_G0031167.1 mouse_genomes_project 6 163444136 163666362 - MGP_CBAJ_P0080669 Tmtc1 protein_coding protein_coding MGP_CBAJ_T0080670.1 MGP_CBAJ_G0031167.1 mouse_genomes_project 6 163458499 163663595 - MGP_CBAJ_P0080670 Tmtc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080671.1 MGP_CBAJ_G0031167.1 mouse_genomes_project 6 163627788 163663595 - MGP_CBAJ_P0080671 Tmtc1 protein_coding protein_coding MGP_CBAJ_T0008649.1 MGP_CBAJ_G0006979.1 mouse_genomes_project 6 149185470 149213478 + 4930425L21Rik lincRNA lincRNA MGP_CBAJ_T0008650.1 MGP_CBAJ_G0006979.1 mouse_genomes_project 6 149209478 149214610 + 4930425L21Rik lincRNA lincRNA MGP_CBAJ_T0080120.1 MGP_CBAJ_G0031055.1 mouse_genomes_project 6 146017468 146018398 - MGP_CBAJ_P0080120 Tas2r113 protein_coding protein_coding MGP_CBAJ_T0008445.1 MGP_CBAJ_G0006825.1 mouse_genomes_project 6 31586467 31597436 + lincRNA lincRNA MGP_CBAJ_T0079803.1 MGP_CBAJ_G0030954.1 mouse_genomes_project 6 137000564 137008432 - MGP_CBAJ_P0079803 Tapbpl protein_coding protein_coding MGP_CBAJ_T0010681.1 MGP_CBAJ_G0008819.1 mouse_genomes_project 6 131032769 131032853 - Mir706 miRNA miRNA MGP_CBAJ_T0075772.1 MGP_CBAJ_G0030103.1 mouse_genomes_project 6 1523938 1606659 - MGP_CBAJ_P0075772 Sgce protein_coding protein_coding MGP_CBAJ_T0075773.1 MGP_CBAJ_G0030103.1 mouse_genomes_project 6 1523938 1606687 - MGP_CBAJ_P0075773 Sgce protein_coding protein_coding MGP_CBAJ_T0075774.1 MGP_CBAJ_G0030103.1 mouse_genomes_project 6 1523942 1606640 - MGP_CBAJ_P0075774 Sgce protein_coding protein_coding MGP_CBAJ_T0075775.1 MGP_CBAJ_G0030103.1 mouse_genomes_project 6 1523942 1606690 - MGP_CBAJ_P0075775 Sgce protein_coding protein_coding MGP_CBAJ_T0075776.1 MGP_CBAJ_G0030103.1 mouse_genomes_project 6 1523972 1606599 - MGP_CBAJ_P0075776 Sgce protein_coding protein_coding MGP_CBAJ_T0075777.1 MGP_CBAJ_G0030103.1 mouse_genomes_project 6 1524006 1606607 - MGP_CBAJ_P0075777 Sgce protein_coding protein_coding MGP_CBAJ_T0075778.1 MGP_CBAJ_G0030103.1 mouse_genomes_project 6 1524006 1606671 - MGP_CBAJ_P0075778 Sgce protein_coding protein_coding MGP_CBAJ_T0075779.1 MGP_CBAJ_G0030103.1 mouse_genomes_project 6 1527297 1606640 - Sgce protein_coding retained_intron MGP_CBAJ_T0075780.1 MGP_CBAJ_G0030103.1 mouse_genomes_project 6 1540361 1606563 - Sgce protein_coding retained_intron MGP_CBAJ_T0075781.1 MGP_CBAJ_G0030103.1 mouse_genomes_project 6 1543177 1606553 - Sgce protein_coding processed_transcript MGP_CBAJ_T0075782.1 MGP_CBAJ_G0030103.1 mouse_genomes_project 6 1543349 1606546 - MGP_CBAJ_P0075782 Sgce protein_coding nonsense_mediated_decay MGP_CBAJ_T0075783.1 MGP_CBAJ_G0030103.1 mouse_genomes_project 6 1562310 1566693 - Sgce protein_coding retained_intron MGP_CBAJ_T0075784.1 MGP_CBAJ_G0030103.1 mouse_genomes_project 6 1595191 1598257 - Sgce protein_coding retained_intron MGP_CBAJ_T0079923.1 MGP_CBAJ_G0030983.1 mouse_genomes_project 6 140570517 140620257 - MGP_CBAJ_P0079923 Tulp3 protein_coding protein_coding MGP_CBAJ_T0079924.1 MGP_CBAJ_G0030983.1 mouse_genomes_project 6 140572334 140574870 - Tulp3 protein_coding processed_transcript MGP_CBAJ_T0079925.1 MGP_CBAJ_G0030983.1 mouse_genomes_project 6 140588550 140620247 - Tulp3 protein_coding retained_intron MGP_CBAJ_T0079926.1 MGP_CBAJ_G0030983.1 mouse_genomes_project 6 140591186 140620221 - MGP_CBAJ_P0079926 Tulp3 protein_coding protein_coding MGP_CBAJ_T0079927.1 MGP_CBAJ_G0030983.1 mouse_genomes_project 6 140600565 140603988 - Tulp3 protein_coding retained_intron MGP_CBAJ_T0079928.1 MGP_CBAJ_G0030983.1 mouse_genomes_project 6 140601244 140620231 - MGP_CBAJ_P0079928 Tulp3 protein_coding protein_coding MGP_CBAJ_T0015296.1 MGP_CBAJ_G0013408.1 mouse_genomes_project 6 112144243 112144396 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0080443.1 MGP_CBAJ_G0031129.1 mouse_genomes_project 6 156991757 157049286 - MGP_CBAJ_P0080443 Gys2 protein_coding protein_coding MGP_CBAJ_T0080444.1 MGP_CBAJ_G0031129.1 mouse_genomes_project 6 156991761 156992764 - MGP_CBAJ_P0080444 Gys2 protein_coding protein_coding MGP_CBAJ_T0002006.1 MGP_CBAJ_G0001922.1 mouse_genomes_project 6 90683191 90685414 + TEC TEC MGP_CBAJ_T0002016.1 MGP_CBAJ_G0001932.1 mouse_genomes_project 6 94148494 94150185 + TEC TEC MGP_CBAJ_T0015423.1 MGP_CBAJ_G0013535.1 mouse_genomes_project 6 150391094 150391373 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005010.1 MGP_CBAJ_G0004271.1 mouse_genomes_project 6 140100050 140112912 - Gm15870 antisense antisense MGP_CBAJ_T0015289.1 MGP_CBAJ_G0013401.1 mouse_genomes_project 6 109289952 109290374 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0076649.1 MGP_CBAJ_G0030269.1 mouse_genomes_project 6 40148773 40201396 - MGP_CBAJ_P0076649 Slc37a3 protein_coding protein_coding MGP_CBAJ_T0076650.1 MGP_CBAJ_G0030269.1 mouse_genomes_project 6 40149985 40201393 - MGP_CBAJ_P0076650 Slc37a3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076651.1 MGP_CBAJ_G0030269.1 mouse_genomes_project 6 40149986 40161685 - Slc37a3 protein_coding processed_transcript MGP_CBAJ_T0076652.1 MGP_CBAJ_G0030269.1 mouse_genomes_project 6 40149989 40196651 - MGP_CBAJ_P0076652 Slc37a3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076653.1 MGP_CBAJ_G0030269.1 mouse_genomes_project 6 40150606 40161101 - Slc37a3 protein_coding processed_transcript MGP_CBAJ_T0076654.1 MGP_CBAJ_G0030269.1 mouse_genomes_project 6 40157632 40161073 - Slc37a3 protein_coding retained_intron MGP_CBAJ_T0076655.1 MGP_CBAJ_G0030269.1 mouse_genomes_project 6 40168675 40201380 - MGP_CBAJ_P0076655 Slc37a3 protein_coding protein_coding MGP_CBAJ_T0076656.1 MGP_CBAJ_G0030269.1 mouse_genomes_project 6 40171157 40201393 - MGP_CBAJ_P0076656 Slc37a3 protein_coding protein_coding MGP_CBAJ_T0076657.1 MGP_CBAJ_G0030269.1 mouse_genomes_project 6 40176039 40201368 - MGP_CBAJ_P0076657 Slc37a3 protein_coding protein_coding MGP_CBAJ_T0076658.1 MGP_CBAJ_G0030269.1 mouse_genomes_project 6 40176064 40201357 - MGP_CBAJ_P0076658 Slc37a3 protein_coding protein_coding MGP_CBAJ_T0076659.1 MGP_CBAJ_G0030269.1 mouse_genomes_project 6 40176066 40201383 - MGP_CBAJ_P0076659 Slc37a3 protein_coding protein_coding MGP_CBAJ_T0076660.1 MGP_CBAJ_G0030269.1 mouse_genomes_project 6 40188619 40201378 - MGP_CBAJ_P0076660 Slc37a3 protein_coding protein_coding MGP_CBAJ_T0076661.1 MGP_CBAJ_G0030269.1 mouse_genomes_project 6 40191674 40201360 - Slc37a3 protein_coding processed_transcript MGP_CBAJ_T0076662.1 MGP_CBAJ_G0030269.1 mouse_genomes_project 6 40191683 40201339 - Slc37a3 protein_coding processed_transcript MGP_CBAJ_T0080106.1 MGP_CBAJ_G0031042.1 mouse_genomes_project 6 145561237 145564119 - MGP_CBAJ_P0080106 protein_coding protein_coding MGP_CBAJ_T0100715.1 MGP_CBAJ_G0038970.1 mouse_genomes_project 6 160275790 160275877 + Gm23498 snoRNA snoRNA MGP_CBAJ_T0000260.1 MGP_CBAJ_G0000205.1 mouse_genomes_project 6 72203907 72204404 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0077942.1 MGP_CBAJ_G0030599.1 mouse_genomes_project 6 90250645 90276365 - MGP_CBAJ_P0077942 Actg2 protein_coding protein_coding MGP_CBAJ_T0077943.1 MGP_CBAJ_G0030599.1 mouse_genomes_project 6 90250652 90268478 - MGP_CBAJ_P0077943 Actg2 protein_coding protein_coding MGP_CBAJ_T0077944.1 MGP_CBAJ_G0030599.1 mouse_genomes_project 6 90259898 90267392 - Actg2 protein_coding processed_transcript MGP_CBAJ_T0077945.1 MGP_CBAJ_G0030599.1 mouse_genomes_project 6 90259898 90276323 - MGP_CBAJ_P0077945 Actg2 protein_coding protein_coding MGP_CBAJ_T0077946.1 MGP_CBAJ_G0030599.1 mouse_genomes_project 6 90260039 90267979 - MGP_CBAJ_P0077946 Actg2 protein_coding protein_coding MGP_CBAJ_T0077947.1 MGP_CBAJ_G0030599.1 mouse_genomes_project 6 90260812 90268298 - MGP_CBAJ_P0077947 Actg2 protein_coding protein_coding MGP_CBAJ_T0002004.1 MGP_CBAJ_G0001920.1 mouse_genomes_project 6 90042767 90045564 - TEC TEC MGP_CBAJ_T0079538.1 MGP_CBAJ_G0030902.1 mouse_genomes_project 6 134713381 134747764 + MGP_CBAJ_P0079538 Clec4b2 protein_coding protein_coding MGP_CBAJ_T0004927.1 MGP_CBAJ_G0004214.1 mouse_genomes_project 6 93752888 93777488 + 1600020E01Rik antisense antisense MGP_CBAJ_T0004928.1 MGP_CBAJ_G0004214.1 mouse_genomes_project 6 93752888 93794858 + 1600020E01Rik antisense antisense MGP_CBAJ_T0004929.1 MGP_CBAJ_G0004214.1 mouse_genomes_project 6 93752914 93794858 + 1600020E01Rik antisense antisense MGP_CBAJ_T0004930.1 MGP_CBAJ_G0004214.1 mouse_genomes_project 6 93753453 93812377 + 1600020E01Rik antisense antisense MGP_CBAJ_T0004931.1 MGP_CBAJ_G0004214.1 mouse_genomes_project 6 93753962 93794858 + 1600020E01Rik antisense antisense MGP_CBAJ_T0004932.1 MGP_CBAJ_G0004214.1 mouse_genomes_project 6 93754044 93794857 + 1600020E01Rik antisense antisense MGP_CBAJ_T0004933.1 MGP_CBAJ_G0004214.1 mouse_genomes_project 6 93754117 93793915 + 1600020E01Rik antisense antisense MGP_CBAJ_T0004934.1 MGP_CBAJ_G0004214.1 mouse_genomes_project 6 93774446 93812807 + 1600020E01Rik antisense antisense MGP_CBAJ_T0015158.1 MGP_CBAJ_G0013270.1 mouse_genomes_project 6 68152565 68152730 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002128.1 MGP_CBAJ_G0002043.1 mouse_genomes_project 6 151534245 151537695 - TEC TEC MGP_CBAJ_T0076210.1 MGP_CBAJ_G0030192.1 mouse_genomes_project 6 28874028 28885770 + MGP_CBAJ_P0076210 Fam71f2 protein_coding protein_coding MGP_CBAJ_T0076211.1 MGP_CBAJ_G0030192.1 mouse_genomes_project 6 28875576 28891358 + MGP_CBAJ_P0076211 Fam71f2 protein_coding protein_coding MGP_CBAJ_T0076212.1 MGP_CBAJ_G0030192.1 mouse_genomes_project 6 28875578 28891353 + MGP_CBAJ_P0076212 Fam71f2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077081.1 MGP_CBAJ_G0030394.1 mouse_genomes_project 6 51618569 51715903 + MGP_CBAJ_P0077081 Stk31 protein_coding protein_coding MGP_CBAJ_T0077082.1 MGP_CBAJ_G0030394.1 mouse_genomes_project 6 51618600 51715754 + MGP_CBAJ_P0077082 Stk31 protein_coding protein_coding MGP_CBAJ_T0077083.1 MGP_CBAJ_G0030394.1 mouse_genomes_project 6 51618600 51715754 + MGP_CBAJ_P0077083 Stk31 protein_coding protein_coding MGP_CBAJ_T0077084.1 MGP_CBAJ_G0030394.1 mouse_genomes_project 6 51624552 51715754 + MGP_CBAJ_P0077084 Stk31 protein_coding unknown_likely_coding MGP_CBAJ_T0077085.1 MGP_CBAJ_G0030394.1 mouse_genomes_project 6 51678626 51715902 + MGP_CBAJ_P0077085 Stk31 protein_coding protein_coding MGP_CBAJ_T0102031.1 MGP_CBAJ_G0040061.1 mouse_genomes_project 6 143085966 143095595 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0080632.1 MGP_CBAJ_G0031160.1 mouse_genomes_project 6 162088667 162096507 + Mrps35 protein_coding retained_intron MGP_CBAJ_T0080633.1 MGP_CBAJ_G0031160.1 mouse_genomes_project 6 162088667 162126150 + MGP_CBAJ_P0080633 Mrps35 protein_coding protein_coding MGP_CBAJ_T0080634.1 MGP_CBAJ_G0031160.1 mouse_genomes_project 6 162088933 162119564 + MGP_CBAJ_P0080634 Mrps35 protein_coding unknown_likely_coding MGP_CBAJ_T0080635.1 MGP_CBAJ_G0031160.1 mouse_genomes_project 6 162090495 162102082 + MGP_CBAJ_P0080635 Mrps35 protein_coding protein_coding MGP_CBAJ_T0080636.1 MGP_CBAJ_G0031160.1 mouse_genomes_project 6 162106536 162119561 + Mrps35 protein_coding processed_transcript MGP_CBAJ_T0080637.1 MGP_CBAJ_G0031160.1 mouse_genomes_project 6 162107554 162119640 + Mrps35 protein_coding processed_transcript MGP_CBAJ_T0004884.1 MGP_CBAJ_G0004185.1 mouse_genomes_project 6 58218365 58229961 - Gm44073 antisense antisense MGP_CBAJ_T0015353.1 MGP_CBAJ_G0013465.1 mouse_genomes_project 6 133682824 133683206 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0079586.1 MGP_CBAJ_G0030921.1 mouse_genomes_project 6 136375552 136422286 + Lpcat3 protein_coding retained_intron MGP_CBAJ_T0079587.1 MGP_CBAJ_G0030921.1 mouse_genomes_project 6 136375552 136422334 + MGP_CBAJ_P0079587 Lpcat3 protein_coding protein_coding MGP_CBAJ_T0079588.1 MGP_CBAJ_G0030921.1 mouse_genomes_project 6 136375697 136420206 + MGP_CBAJ_P0079588 Lpcat3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079589.1 MGP_CBAJ_G0030921.1 mouse_genomes_project 6 136375706 136417181 + Lpcat3 protein_coding retained_intron MGP_CBAJ_T0079590.1 MGP_CBAJ_G0030921.1 mouse_genomes_project 6 136375740 136418240 + Lpcat3 protein_coding retained_intron MGP_CBAJ_T0079591.1 MGP_CBAJ_G0030921.1 mouse_genomes_project 6 136419098 136420529 + Lpcat3 protein_coding retained_intron MGP_CBAJ_T0079592.1 MGP_CBAJ_G0030921.1 mouse_genomes_project 6 136420172 136420974 + Lpcat3 protein_coding processed_transcript MGP_CBAJ_T0079593.1 MGP_CBAJ_G0030921.1 mouse_genomes_project 6 136420670 136421844 + Lpcat3 protein_coding retained_intron MGP_CBAJ_T0079594.1 MGP_CBAJ_G0030921.1 mouse_genomes_project 6 136420920 136421933 + Lpcat3 protein_coding retained_intron MGP_CBAJ_T0076990.1 MGP_CBAJ_G0030371.1 mouse_genomes_project 6 50692327 50713585 + MGP_CBAJ_P0076990 Zfp775 protein_coding protein_coding MGP_CBAJ_T0076991.1 MGP_CBAJ_G0030371.1 mouse_genomes_project 6 50697504 50710169 + MGP_CBAJ_P0076991 Zfp775 protein_coding protein_coding MGP_CBAJ_T0076992.1 MGP_CBAJ_G0030371.1 mouse_genomes_project 6 50703578 50713585 + MGP_CBAJ_P0076992 Zfp775 protein_coding protein_coding MGP_CBAJ_T0004833.1 MGP_CBAJ_G0004146.1 mouse_genomes_project 6 27689442 27737792 + 6530409C15Rik antisense antisense MGP_CBAJ_T0004834.1 MGP_CBAJ_G0004146.1 mouse_genomes_project 6 27689463 27692790 + 6530409C15Rik antisense antisense MGP_CBAJ_T0080530.1 MGP_CBAJ_G0031142.1 mouse_genomes_project 6 160105554 160110218 + MGP_CBAJ_P0080530 Lyrm5 protein_coding protein_coding MGP_CBAJ_T0080531.1 MGP_CBAJ_G0031142.1 mouse_genomes_project 6 160105576 160111368 + MGP_CBAJ_P0080531 Lyrm5 protein_coding protein_coding MGP_CBAJ_T0080532.1 MGP_CBAJ_G0031142.1 mouse_genomes_project 6 160105576 160110965 + MGP_CBAJ_P0080532 Lyrm5 protein_coding protein_coding MGP_CBAJ_T0080533.1 MGP_CBAJ_G0031142.1 mouse_genomes_project 6 160105590 160109394 + Lyrm5 protein_coding processed_transcript MGP_CBAJ_T0080534.1 MGP_CBAJ_G0031142.1 mouse_genomes_project 6 160105595 160110965 + MGP_CBAJ_P0080534 Lyrm5 protein_coding protein_coding MGP_CBAJ_T0080535.1 MGP_CBAJ_G0031142.1 mouse_genomes_project 6 160105595 160110198 + MGP_CBAJ_P0080535 Lyrm5 protein_coding protein_coding MGP_CBAJ_T0080536.1 MGP_CBAJ_G0031142.1 mouse_genomes_project 6 160105606 160110965 + MGP_CBAJ_P0080536 Lyrm5 protein_coding protein_coding MGP_CBAJ_T0080537.1 MGP_CBAJ_G0031142.1 mouse_genomes_project 6 160105620 160110161 + MGP_CBAJ_P0080537 Lyrm5 protein_coding protein_coding MGP_CBAJ_T0080179.1 MGP_CBAJ_G0031073.1 mouse_genomes_project 6 148339975 148345108 + MGP_CBAJ_P0080179 Cdkn1b protein_coding protein_coding MGP_CBAJ_T0080180.1 MGP_CBAJ_G0031073.1 mouse_genomes_project 6 148339975 148345108 + MGP_CBAJ_P0080180 Cdkn1b protein_coding protein_coding MGP_CBAJ_T0080181.1 MGP_CBAJ_G0031073.1 mouse_genomes_project 6 148340088 148344920 + MGP_CBAJ_P0080181 Cdkn1b protein_coding protein_coding MGP_CBAJ_T0102028.1 MGP_CBAJ_G0040058.1 mouse_genomes_project 6 141508509 141509349 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010636.1 MGP_CBAJ_G0008774.1 mouse_genomes_project 6 36846718 36846802 + Mir490 miRNA miRNA MGP_CBAJ_T0077554.1 MGP_CBAJ_G0030523.1 mouse_genomes_project 6 76552844 76566478 + MGP_CBAJ_P0077554 Krcc1 protein_coding protein_coding MGP_CBAJ_T0077555.1 MGP_CBAJ_G0030523.1 mouse_genomes_project 6 76552868 76565399 + MGP_CBAJ_P0077555 Krcc1 protein_coding protein_coding MGP_CBAJ_T0077556.1 MGP_CBAJ_G0030523.1 mouse_genomes_project 6 76553180 76566478 + MGP_CBAJ_P0077556 Krcc1 protein_coding protein_coding MGP_CBAJ_T0077557.1 MGP_CBAJ_G0030523.1 mouse_genomes_project 6 76563437 76566477 + MGP_CBAJ_P0077557 Krcc1 protein_coding protein_coding MGP_CBAJ_T0080698.1 MGP_CBAJ_G0031171.1 mouse_genomes_project 6 164287636 164411534 - MGP_CBAJ_P0080698 Dennd5b protein_coding protein_coding MGP_CBAJ_T0080699.1 MGP_CBAJ_G0031171.1 mouse_genomes_project 6 164313860 164317199 - Dennd5b protein_coding retained_intron MGP_CBAJ_T0080700.1 MGP_CBAJ_G0031171.1 mouse_genomes_project 6 164313998 164411392 - Dennd5b protein_coding retained_intron MGP_CBAJ_T0080701.1 MGP_CBAJ_G0031171.1 mouse_genomes_project 6 164340799 164345578 - Dennd5b protein_coding retained_intron MGP_CBAJ_T0080702.1 MGP_CBAJ_G0031171.1 mouse_genomes_project 6 164374380 164388552 - MGP_CBAJ_P0080702 Dennd5b protein_coding protein_coding MGP_CBAJ_T0080703.1 MGP_CBAJ_G0031171.1 mouse_genomes_project 6 164374403 164411438 - MGP_CBAJ_P0080703 Dennd5b protein_coding protein_coding MGP_CBAJ_T0080704.1 MGP_CBAJ_G0031171.1 mouse_genomes_project 6 164389649 164392628 - Dennd5b protein_coding retained_intron MGP_CBAJ_T0079673.1 MGP_CBAJ_G0030934.1 mouse_genomes_project 6 136556152 136562188 - MGP_CBAJ_P0079673 Gnb3 protein_coding protein_coding MGP_CBAJ_T0079674.1 MGP_CBAJ_G0030934.1 mouse_genomes_project 6 136556159 136561870 - Gnb3 protein_coding retained_intron MGP_CBAJ_T0079675.1 MGP_CBAJ_G0030934.1 mouse_genomes_project 6 136556591 136558210 - Gnb3 protein_coding processed_transcript MGP_CBAJ_T0079676.1 MGP_CBAJ_G0030934.1 mouse_genomes_project 6 136561011 136561996 - Gnb3 protein_coding retained_intron MGP_CBAJ_T0099427.1 MGP_CBAJ_G0037682.1 mouse_genomes_project 6 43569471 43569578 - Gm24611 snRNA snRNA MGP_CBAJ_T0005019.1 MGP_CBAJ_G0004278.1 mouse_genomes_project 6 147556712 147567261 - Gm17089 antisense antisense MGP_CBAJ_T0076167.1 MGP_CBAJ_G0030184.1 mouse_genomes_project 6 27933592 27943040 - MGP_CBAJ_P0076167 Pax4 protein_coding protein_coding MGP_CBAJ_T0076168.1 MGP_CBAJ_G0030184.1 mouse_genomes_project 6 27933592 27943142 - MGP_CBAJ_P0076168 Pax4 protein_coding protein_coding MGP_CBAJ_T0076169.1 MGP_CBAJ_G0030184.1 mouse_genomes_project 6 27933597 27943040 - MGP_CBAJ_P0076169 Pax4 protein_coding protein_coding MGP_CBAJ_T0076170.1 MGP_CBAJ_G0030184.1 mouse_genomes_project 6 27933633 27940977 - MGP_CBAJ_P0076170 Pax4 protein_coding protein_coding MGP_CBAJ_T0076171.1 MGP_CBAJ_G0030184.1 mouse_genomes_project 6 27937678 27940174 - Pax4 protein_coding retained_intron MGP_CBAJ_T0076172.1 MGP_CBAJ_G0030184.1 mouse_genomes_project 6 27938573 27940977 - Pax4 protein_coding retained_intron MGP_CBAJ_T0080262.1 MGP_CBAJ_G0031095.1 mouse_genomes_project 6 150690695 150709379 - MGP_CBAJ_P0080262 Erp27 protein_coding protein_coding MGP_CBAJ_T0080263.1 MGP_CBAJ_G0031095.1 mouse_genomes_project 6 150693145 150709379 - Erp27 protein_coding retained_intron MGP_CBAJ_T0080264.1 MGP_CBAJ_G0031095.1 mouse_genomes_project 6 150706865 150709339 - Erp27 protein_coding retained_intron MGP_CBAJ_T0008658.1 MGP_CBAJ_G0006986.1 mouse_genomes_project 6 157634164 157634551 + 4930434O05Rik lincRNA lincRNA MGP_CBAJ_T0077758.1 MGP_CBAJ_G0030563.1 mouse_genomes_project 6 84565413 84571370 + MGP_CBAJ_P0077758 Reg1 protein_coding protein_coding MGP_CBAJ_T0077759.1 MGP_CBAJ_G0030563.1 mouse_genomes_project 6 84565473 84571370 + MGP_CBAJ_P0077759 Reg1 protein_coding protein_coding MGP_CBAJ_T0077760.1 MGP_CBAJ_G0030563.1 mouse_genomes_project 6 84568685 84571369 + MGP_CBAJ_P0077760 Reg1 protein_coding protein_coding MGP_CBAJ_T0015281.1 MGP_CBAJ_G0013393.1 mouse_genomes_project 6 104086020 104086387 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0079379.1 MGP_CBAJ_G0030867.1 mouse_genomes_project 6 131534389 131556038 + Il17ra protein_coding retained_intron MGP_CBAJ_T0079380.1 MGP_CBAJ_G0030867.1 mouse_genomes_project 6 131534389 131559753 + MGP_CBAJ_P0079380 Il17ra protein_coding protein_coding MGP_CBAJ_T0079381.1 MGP_CBAJ_G0030867.1 mouse_genomes_project 6 131545883 131552319 + Il17ra protein_coding processed_transcript MGP_CBAJ_T0015043.1 MGP_CBAJ_G0013155.1 mouse_genomes_project 6 16611045 16612006 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100673.1 MGP_CBAJ_G0038928.1 mouse_genomes_project 6 63605644 63605773 - Gm22723 snoRNA snoRNA MGP_CBAJ_T0078865.1 MGP_CBAJ_G0030781.1 mouse_genomes_project 6 123485345 123511583 + Cpne9 protein_coding retained_intron MGP_CBAJ_T0078866.1 MGP_CBAJ_G0030781.1 mouse_genomes_project 6 123485345 123511525 + MGP_CBAJ_P0078866 Cpne9 protein_coding protein_coding MGP_CBAJ_T0078867.1 MGP_CBAJ_G0030781.1 mouse_genomes_project 6 123485348 123510782 + MGP_CBAJ_P0078867 Cpne9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078868.1 MGP_CBAJ_G0030781.1 mouse_genomes_project 6 123485373 123486468 + Cpne9 protein_coding retained_intron MGP_CBAJ_T0078869.1 MGP_CBAJ_G0030781.1 mouse_genomes_project 6 123485374 123488307 + Cpne9 protein_coding retained_intron MGP_CBAJ_T0078870.1 MGP_CBAJ_G0030781.1 mouse_genomes_project 6 123485377 123486546 + Cpne9 protein_coding retained_intron MGP_CBAJ_T0078871.1 MGP_CBAJ_G0030781.1 mouse_genomes_project 6 123485402 123487008 + Cpne9 protein_coding processed_transcript MGP_CBAJ_T0078872.1 MGP_CBAJ_G0030781.1 mouse_genomes_project 6 123485403 123487463 + Cpne9 protein_coding processed_transcript MGP_CBAJ_T0078873.1 MGP_CBAJ_G0030781.1 mouse_genomes_project 6 123485512 123510579 + MGP_CBAJ_P0078873 Cpne9 protein_coding unknown_likely_coding MGP_CBAJ_T0078874.1 MGP_CBAJ_G0030781.1 mouse_genomes_project 6 123491511 123511527 + Cpne9 protein_coding retained_intron MGP_CBAJ_T0078875.1 MGP_CBAJ_G0030781.1 mouse_genomes_project 6 123497297 123507650 + Cpne9 protein_coding processed_transcript MGP_CBAJ_T0078427.1 MGP_CBAJ_G0030685.1 mouse_genomes_project 6 97115707 97116640 + MGP_CBAJ_P0078427 Vmn1r40 protein_coding protein_coding MGP_CBAJ_T0015061.1 MGP_CBAJ_G0013173.1 mouse_genomes_project 6 24128679 24129475 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0077030.1 MGP_CBAJ_G0030382.1 mouse_genomes_project 6 50946443 50953755 - MGP_CBAJ_P0077030 Tmem176b protein_coding protein_coding MGP_CBAJ_T0077031.1 MGP_CBAJ_G0030382.1 mouse_genomes_project 6 50947239 50953392 - MGP_CBAJ_P0077031 Tmem176b protein_coding protein_coding MGP_CBAJ_T0077032.1 MGP_CBAJ_G0030382.1 mouse_genomes_project 6 50948068 50953709 - MGP_CBAJ_P0077032 Tmem176b protein_coding protein_coding MGP_CBAJ_T0077033.1 MGP_CBAJ_G0030382.1 mouse_genomes_project 6 50948068 50954127 - MGP_CBAJ_P0077033 Tmem176b protein_coding protein_coding MGP_CBAJ_T0077034.1 MGP_CBAJ_G0030382.1 mouse_genomes_project 6 50948070 50953379 - MGP_CBAJ_P0077034 Tmem176b protein_coding protein_coding MGP_CBAJ_T0077035.1 MGP_CBAJ_G0030382.1 mouse_genomes_project 6 50948137 50953226 - MGP_CBAJ_P0077035 Tmem176b protein_coding protein_coding MGP_CBAJ_T0077036.1 MGP_CBAJ_G0030382.1 mouse_genomes_project 6 50948422 50953086 - Tmem176b protein_coding retained_intron MGP_CBAJ_T0015007.1 MGP_CBAJ_G0013119.1 mouse_genomes_project 6 1187974 1188296 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015247.1 MGP_CBAJ_G0013359.1 mouse_genomes_project 6 92040462 92040856 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002103.1 MGP_CBAJ_G0002018.1 mouse_genomes_project 6 138514221 138514751 - TEC TEC MGP_CBAJ_T0015088.1 MGP_CBAJ_G0013200.1 mouse_genomes_project 6 42380335 42380735 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0078430.1 MGP_CBAJ_G0030688.1 mouse_genomes_project 6 97270205 97271274 - MGP_CBAJ_P0078430 Vmn1r43 protein_coding protein_coding MGP_CBAJ_T0001926.1 MGP_CBAJ_G0001842.1 mouse_genomes_project 6 46769081 46772762 + TEC TEC MGP_CBAJ_T0008621.1 MGP_CBAJ_G0006960.1 mouse_genomes_project 6 138225105 138270469 - Gm10415 lincRNA lincRNA MGP_CBAJ_T0076987.1 MGP_CBAJ_G0030370.1 mouse_genomes_project 6 50680968 50703650 + Gm44965 protein_coding processed_transcript MGP_CBAJ_T0076988.1 MGP_CBAJ_G0030370.1 mouse_genomes_project 6 50680971 50709705 + MGP_CBAJ_P0076988 Gm44965 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077113.1 MGP_CBAJ_G0030399.1 mouse_genomes_project 6 52947285 52970619 - MGP_CBAJ_P0077113 4921507P07Rik protein_coding protein_coding MGP_CBAJ_T0101363.1 MGP_CBAJ_G0039440.1 mouse_genomes_project 6 144405097 144550219 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101364.1 MGP_CBAJ_G0039440.1 mouse_genomes_project 6 144495387 144501093 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0015060.1 MGP_CBAJ_G0013172.1 mouse_genomes_project 6 23890690 23891520 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008549.1 MGP_CBAJ_G0006902.1 mouse_genomes_project 6 93700493 93709099 - lincRNA lincRNA MGP_CBAJ_T0008550.1 MGP_CBAJ_G0006902.1 mouse_genomes_project 6 93700493 93709076 - lincRNA lincRNA MGP_CBAJ_T0076307.1 MGP_CBAJ_G0030207.1 mouse_genomes_project 6 29778064 29830381 + MGP_CBAJ_P0076307 Nrf1 protein_coding protein_coding MGP_CBAJ_T0076308.1 MGP_CBAJ_G0030207.1 mouse_genomes_project 6 29778102 29830714 + Nrf1 protein_coding retained_intron MGP_CBAJ_T0076309.1 MGP_CBAJ_G0030207.1 mouse_genomes_project 6 29778104 29879022 + MGP_CBAJ_P0076309 Nrf1 protein_coding protein_coding MGP_CBAJ_T0076310.1 MGP_CBAJ_G0030207.1 mouse_genomes_project 6 29778115 29827158 + MGP_CBAJ_P0076310 Nrf1 protein_coding protein_coding MGP_CBAJ_T0076311.1 MGP_CBAJ_G0030207.1 mouse_genomes_project 6 29778118 29888932 + MGP_CBAJ_P0076311 Nrf1 protein_coding protein_coding MGP_CBAJ_T0076312.1 MGP_CBAJ_G0030207.1 mouse_genomes_project 6 29778145 29879359 + MGP_CBAJ_P0076312 Nrf1 protein_coding protein_coding MGP_CBAJ_T0076313.1 MGP_CBAJ_G0030207.1 mouse_genomes_project 6 29778145 29864312 + MGP_CBAJ_P0076313 Nrf1 protein_coding protein_coding MGP_CBAJ_T0076314.1 MGP_CBAJ_G0030207.1 mouse_genomes_project 6 29778224 29821841 + MGP_CBAJ_P0076314 Nrf1 protein_coding protein_coding MGP_CBAJ_T0076315.1 MGP_CBAJ_G0030207.1 mouse_genomes_project 6 29808718 29863915 + MGP_CBAJ_P0076315 Nrf1 protein_coding protein_coding MGP_CBAJ_T0076316.1 MGP_CBAJ_G0030207.1 mouse_genomes_project 6 29820480 29888083 + MGP_CBAJ_P0076316 Nrf1 protein_coding unknown_likely_coding MGP_CBAJ_T0076317.1 MGP_CBAJ_G0030207.1 mouse_genomes_project 6 29821691 29879017 + MGP_CBAJ_P0076317 Nrf1 protein_coding protein_coding MGP_CBAJ_T0076318.1 MGP_CBAJ_G0030207.1 mouse_genomes_project 6 29821697 29863614 + MGP_CBAJ_P0076318 Nrf1 protein_coding protein_coding MGP_CBAJ_T0076319.1 MGP_CBAJ_G0030207.1 mouse_genomes_project 6 29821697 29879017 + MGP_CBAJ_P0076319 Nrf1 protein_coding protein_coding MGP_CBAJ_T0076320.1 MGP_CBAJ_G0030207.1 mouse_genomes_project 6 29821697 29863614 + MGP_CBAJ_P0076320 Nrf1 protein_coding protein_coding MGP_CBAJ_T0076321.1 MGP_CBAJ_G0030207.1 mouse_genomes_project 6 29821736 29822801 + Nrf1 protein_coding retained_intron MGP_CBAJ_T0076322.1 MGP_CBAJ_G0030207.1 mouse_genomes_project 6 29829588 29848310 + Nrf1 protein_coding processed_transcript MGP_CBAJ_T0076323.1 MGP_CBAJ_G0030207.1 mouse_genomes_project 6 29848298 29875066 + MGP_CBAJ_P0076323 Nrf1 protein_coding protein_coding MGP_CBAJ_T0005005.1 MGP_CBAJ_G0004267.1 mouse_genomes_project 6 139149747 139151826 + antisense antisense MGP_CBAJ_T0080324.1 MGP_CBAJ_G0031104.1 mouse_genomes_project 6 152174438 152193718 + MGP_CBAJ_P0080324 Mgst1 protein_coding protein_coding MGP_CBAJ_T0080325.1 MGP_CBAJ_G0031104.1 mouse_genomes_project 6 152174650 152193568 + MGP_CBAJ_P0080325 Mgst1 protein_coding protein_coding MGP_CBAJ_T0080326.1 MGP_CBAJ_G0031104.1 mouse_genomes_project 6 152174676 152193355 + MGP_CBAJ_P0080326 Mgst1 protein_coding protein_coding MGP_CBAJ_T0080327.1 MGP_CBAJ_G0031104.1 mouse_genomes_project 6 152174693 152193705 + MGP_CBAJ_P0080327 Mgst1 protein_coding protein_coding MGP_CBAJ_T0080328.1 MGP_CBAJ_G0031104.1 mouse_genomes_project 6 152174721 152193347 + MGP_CBAJ_P0080328 Mgst1 protein_coding protein_coding MGP_CBAJ_T0080329.1 MGP_CBAJ_G0031104.1 mouse_genomes_project 6 152175492 152193522 + MGP_CBAJ_P0080329 Mgst1 protein_coding protein_coding MGP_CBAJ_T0080330.1 MGP_CBAJ_G0031104.1 mouse_genomes_project 6 152175708 152193575 + MGP_CBAJ_P0080330 Mgst1 protein_coding protein_coding MGP_CBAJ_T0080331.1 MGP_CBAJ_G0031104.1 mouse_genomes_project 6 152176976 152187871 + MGP_CBAJ_P0080331 Mgst1 protein_coding protein_coding MGP_CBAJ_T0078969.1 MGP_CBAJ_G0030799.1 mouse_genomes_project 6 123864969 123872642 + MGP_CBAJ_P0078969 Vhl protein_coding protein_coding MGP_CBAJ_T0078970.1 MGP_CBAJ_G0030799.1 mouse_genomes_project 6 123865731 123870770 + Vhl protein_coding processed_transcript MGP_CBAJ_T0078971.1 MGP_CBAJ_G0030799.1 mouse_genomes_project 6 123865939 123870566 + Vhl protein_coding processed_transcript MGP_CBAJ_T0078972.1 MGP_CBAJ_G0030799.1 mouse_genomes_project 6 123870515 123872636 + MGP_CBAJ_P0078972 Vhl protein_coding nonsense_mediated_decay MGP_CBAJ_T0015024.1 MGP_CBAJ_G0013136.1 mouse_genomes_project 6 7763355 7763980 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001887.1 MGP_CBAJ_G0001803.1 mouse_genomes_project 6 13835900 13837591 + TEC TEC MGP_CBAJ_T0078724.1 MGP_CBAJ_G0030754.1 mouse_genomes_project 6 109534867 109549067 + protein_coding retained_intron MGP_CBAJ_T0078725.1 MGP_CBAJ_G0030754.1 mouse_genomes_project 6 109534918 109549156 + MGP_CBAJ_P0078725 protein_coding protein_coding MGP_CBAJ_T0002022.1 MGP_CBAJ_G0001938.1 mouse_genomes_project 6 94610608 94612713 - TEC TEC MGP_CBAJ_T0102040.1 MGP_CBAJ_G0040070.1 mouse_genomes_project 6 146097471 146098374 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0076416.1 MGP_CBAJ_G0030223.1 mouse_genomes_project 6 31440812 31489300 - MGP_CBAJ_P0076416 Podxl protein_coding protein_coding MGP_CBAJ_T0076417.1 MGP_CBAJ_G0030223.1 mouse_genomes_project 6 31444313 31445633 - Podxl protein_coding processed_transcript MGP_CBAJ_T0001934.1 MGP_CBAJ_G0001850.1 mouse_genomes_project 6 47529288 47531664 + TEC TEC MGP_CBAJ_T0008471.1 MGP_CBAJ_G0006840.1 mouse_genomes_project 6 40039951 40042379 + Gm43479 lincRNA lincRNA MGP_CBAJ_T0079526.1 MGP_CBAJ_G0030897.1 mouse_genomes_project 6 134413989 134426757 + MGP_CBAJ_P0079526 Clec4a1 protein_coding protein_coding MGP_CBAJ_T0099470.1 MGP_CBAJ_G0037725.1 mouse_genomes_project 6 164379795 164379899 - Gm23462 snRNA snRNA MGP_CBAJ_T0015205.1 MGP_CBAJ_G0013317.1 mouse_genomes_project 6 73440854 73441335 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0077892.1 MGP_CBAJ_G0030592.1 mouse_genomes_project 6 89878448 89915801 + MGP_CBAJ_P0077892 Dctn1 protein_coding protein_coding MGP_CBAJ_T0077893.1 MGP_CBAJ_G0030592.1 mouse_genomes_project 6 89878479 89915802 + MGP_CBAJ_P0077893 Dctn1 protein_coding protein_coding MGP_CBAJ_T0077894.1 MGP_CBAJ_G0030592.1 mouse_genomes_project 6 89878532 89902105 + MGP_CBAJ_P0077894 Dctn1 protein_coding protein_coding MGP_CBAJ_T0077895.1 MGP_CBAJ_G0030592.1 mouse_genomes_project 6 89892108 89912493 + MGP_CBAJ_P0077895 Dctn1 protein_coding protein_coding MGP_CBAJ_T0077896.1 MGP_CBAJ_G0030592.1 mouse_genomes_project 6 89892111 89915801 + MGP_CBAJ_P0077896 Dctn1 protein_coding protein_coding MGP_CBAJ_T0077897.1 MGP_CBAJ_G0030592.1 mouse_genomes_project 6 89892135 89901676 + MGP_CBAJ_P0077897 Dctn1 protein_coding protein_coding MGP_CBAJ_T0077898.1 MGP_CBAJ_G0030592.1 mouse_genomes_project 6 89898468 89915802 + MGP_CBAJ_P0077898 Dctn1 protein_coding protein_coding MGP_CBAJ_T0077899.1 MGP_CBAJ_G0030592.1 mouse_genomes_project 6 89898938 89915496 + MGP_CBAJ_P0077899 Dctn1 protein_coding unknown_likely_coding MGP_CBAJ_T0077900.1 MGP_CBAJ_G0030592.1 mouse_genomes_project 6 89901133 89902130 + Dctn1 protein_coding retained_intron MGP_CBAJ_T0077901.1 MGP_CBAJ_G0030592.1 mouse_genomes_project 6 89906866 89908103 + Dctn1 protein_coding retained_intron MGP_CBAJ_T0077902.1 MGP_CBAJ_G0030592.1 mouse_genomes_project 6 89907065 89907810 + Dctn1 protein_coding retained_intron MGP_CBAJ_T0077903.1 MGP_CBAJ_G0030592.1 mouse_genomes_project 6 89907624 89908591 + Dctn1 protein_coding retained_intron MGP_CBAJ_T0077904.1 MGP_CBAJ_G0030592.1 mouse_genomes_project 6 89909536 89911139 + Dctn1 protein_coding retained_intron MGP_CBAJ_T0078246.1 MGP_CBAJ_G0030655.1 mouse_genomes_project 6 94699285 94708723 + MGP_CBAJ_P0078246 Bmp10 protein_coding protein_coding MGP_CBAJ_T0015273.1 MGP_CBAJ_G0013385.1 mouse_genomes_project 6 102255083 102255474 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097825.1 MGP_CBAJ_G0036098.1 mouse_genomes_project 6 3887868 3889046 - pseudogene pseudogene MGP_CBAJ_T0075895.1 MGP_CBAJ_G0030129.1 mouse_genomes_project 6 9439154 9465203 + MGP_CBAJ_P0075895 Phf14 protein_coding protein_coding MGP_CBAJ_T0075896.1 MGP_CBAJ_G0030129.1 mouse_genomes_project 6 9439229 9490000 + MGP_CBAJ_P0075896 Phf14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075897.1 MGP_CBAJ_G0030129.1 mouse_genomes_project 6 9457673 9555555 + MGP_CBAJ_P0075897 Phf14 protein_coding protein_coding MGP_CBAJ_T0075898.1 MGP_CBAJ_G0030129.1 mouse_genomes_project 6 9457707 9555623 + MGP_CBAJ_P0075898 Phf14 protein_coding protein_coding MGP_CBAJ_T0075899.1 MGP_CBAJ_G0030129.1 mouse_genomes_project 6 9457708 9633115 + MGP_CBAJ_P0075899 Phf14 protein_coding protein_coding MGP_CBAJ_T0075900.1 MGP_CBAJ_G0030129.1 mouse_genomes_project 6 9457981 9592752 + MGP_CBAJ_P0075900 Phf14 protein_coding unknown_likely_coding MGP_CBAJ_T0075901.1 MGP_CBAJ_G0030129.1 mouse_genomes_project 6 9458575 9532729 + MGP_CBAJ_P0075901 Phf14 protein_coding protein_coding MGP_CBAJ_T0075902.1 MGP_CBAJ_G0030129.1 mouse_genomes_project 6 9533334 9534926 + Phf14 protein_coding retained_intron MGP_CBAJ_T0075903.1 MGP_CBAJ_G0030129.1 mouse_genomes_project 6 9538413 9542851 + Phf14 protein_coding retained_intron MGP_CBAJ_T0075904.1 MGP_CBAJ_G0030129.1 mouse_genomes_project 6 9554361 9633010 + MGP_CBAJ_P0075904 Phf14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075905.1 MGP_CBAJ_G0030129.1 mouse_genomes_project 6 9589592 9596782 + Phf14 protein_coding retained_intron MGP_CBAJ_T0001869.1 MGP_CBAJ_G0001785.1 mouse_genomes_project 6 30399 32513 - TEC TEC MGP_CBAJ_T0015016.1 MGP_CBAJ_G0013128.1 mouse_genomes_project 6 4693545 4693906 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015106.1 MGP_CBAJ_G0013218.1 mouse_genomes_project 6 49759164 49759498 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002017.1 MGP_CBAJ_G0001933.1 mouse_genomes_project 6 94237900 94239696 + TEC TEC MGP_CBAJ_T0099430.1 MGP_CBAJ_G0037685.1 mouse_genomes_project 6 50339267 50339467 + Gm22122 snRNA snRNA MGP_CBAJ_T0002041.1 MGP_CBAJ_G0001957.1 mouse_genomes_project 6 98001038 98001551 + TEC TEC MGP_CBAJ_T0001920.1 MGP_CBAJ_G0001836.1 mouse_genomes_project 6 42929852 42933399 - TEC TEC MGP_CBAJ_T0000264.1 MGP_CBAJ_G0000209.1 mouse_genomes_project 6 72690501 72690961 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0080223.1 MGP_CBAJ_G0031084.1 mouse_genomes_project 6 150034846 150064146 - MGP_CBAJ_P0080223 E330021D16Rik protein_coding protein_coding MGP_CBAJ_T0080224.1 MGP_CBAJ_G0031084.1 mouse_genomes_project 6 150035228 150036344 - MGP_CBAJ_P0080224 E330021D16Rik protein_coding protein_coding MGP_CBAJ_T0080225.1 MGP_CBAJ_G0031084.1 mouse_genomes_project 6 150036008 150064141 - MGP_CBAJ_P0080225 E330021D16Rik protein_coding protein_coding MGP_CBAJ_T0077381.1 MGP_CBAJ_G0030473.1 mouse_genomes_project 6 61180225 61201515 - MGP_CBAJ_P0077381 Vmn1r22 protein_coding protein_coding MGP_CBAJ_T0015319.1 MGP_CBAJ_G0013431.1 mouse_genomes_project 6 123146073 123146200 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0075934.1 MGP_CBAJ_G0030136.1 mouse_genomes_project 6 11654470 11658254 - MGP_CBAJ_P0075934 2610001J05Rik protein_coding protein_coding MGP_CBAJ_T0075935.1 MGP_CBAJ_G0030136.1 mouse_genomes_project 6 11656535 11658202 - MGP_CBAJ_P0075935 2610001J05Rik protein_coding protein_coding MGP_CBAJ_T0075936.1 MGP_CBAJ_G0030136.1 mouse_genomes_project 6 11656595 11658201 - MGP_CBAJ_P0075936 2610001J05Rik protein_coding protein_coding MGP_CBAJ_T0075937.1 MGP_CBAJ_G0030136.1 mouse_genomes_project 6 11656736 11658201 - MGP_CBAJ_P0075937 2610001J05Rik protein_coding protein_coding MGP_CBAJ_T0078421.1 MGP_CBAJ_G0030683.1 mouse_genomes_project 6 96777358 96990703 - MGP_CBAJ_P0078421 Chchd6 protein_coding protein_coding MGP_CBAJ_T0078422.1 MGP_CBAJ_G0030683.1 mouse_genomes_project 6 96777363 96990703 - MGP_CBAJ_P0078422 Chchd6 protein_coding protein_coding MGP_CBAJ_T0078423.1 MGP_CBAJ_G0030683.1 mouse_genomes_project 6 96812237 96990655 - Chchd6 protein_coding retained_intron MGP_CBAJ_T0078424.1 MGP_CBAJ_G0030683.1 mouse_genomes_project 6 96962346 96990662 - MGP_CBAJ_P0078424 Chchd6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0004817.1 MGP_CBAJ_G0004136.1 mouse_genomes_project 6 3018241 3046452 - antisense antisense MGP_CBAJ_T0078808.1 MGP_CBAJ_G0030772.1 mouse_genomes_project 6 122431844 122476422 - MGP_CBAJ_P0078808 Ssu2 protein_coding protein_coding MGP_CBAJ_T0078809.1 MGP_CBAJ_G0030772.1 mouse_genomes_project 6 122443461 122466138 - Ssu2 protein_coding processed_transcript MGP_CBAJ_T0078810.1 MGP_CBAJ_G0030772.1 mouse_genomes_project 6 122443996 122461130 - Ssu2 protein_coding retained_intron MGP_CBAJ_T0078811.1 MGP_CBAJ_G0030772.1 mouse_genomes_project 6 122444417 122476398 - MGP_CBAJ_P0078811 Ssu2 protein_coding unknown_likely_coding MGP_CBAJ_T0077152.1 MGP_CBAJ_G0030407.1 mouse_genomes_project 6 54731148 54733563 - MGP_CBAJ_P0077152 Hoxa2 protein_coding protein_coding MGP_CBAJ_T0015382.1 MGP_CBAJ_G0013494.1 mouse_genomes_project 6 140725120 140726394 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099468.1 MGP_CBAJ_G0037723.1 mouse_genomes_project 6 150066263 150066348 + Gm25882 snRNA snRNA MGP_CBAJ_T0015261.1 MGP_CBAJ_G0013373.1 mouse_genomes_project 6 96257002 96257525 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0077642.1 MGP_CBAJ_G0030539.1 mouse_genomes_project 6 77859054 77862954 + 0610030E20Rik protein_coding retained_intron MGP_CBAJ_T0077643.1 MGP_CBAJ_G0030539.1 mouse_genomes_project 6 77859063 77860913 + 0610030E20Rik protein_coding retained_intron MGP_CBAJ_T0077644.1 MGP_CBAJ_G0030539.1 mouse_genomes_project 6 77859071 77864834 + MGP_CBAJ_P0077644 0610030E20Rik protein_coding protein_coding MGP_CBAJ_T0077645.1 MGP_CBAJ_G0030539.1 mouse_genomes_project 6 77859104 77862355 + 0610030E20Rik protein_coding retained_intron MGP_CBAJ_T0010621.1 MGP_CBAJ_G0008759.1 mouse_genomes_project 6 13373014 13373125 + Gm25470 miRNA miRNA MGP_CBAJ_T0015241.1 MGP_CBAJ_G0013353.1 mouse_genomes_project 6 89684278 89685035 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015388.1 MGP_CBAJ_G0013500.1 mouse_genomes_project 6 141324378 141325078 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100662.1 MGP_CBAJ_G0038917.1 mouse_genomes_project 6 48194269 48194401 - Gm25161 snoRNA snoRNA MGP_CBAJ_T0077910.1 MGP_CBAJ_G0030594.1 mouse_genomes_project 6 90034383 90046227 - MGP_CBAJ_P0077910 Mthfd2 protein_coding protein_coding MGP_CBAJ_T0077911.1 MGP_CBAJ_G0030594.1 mouse_genomes_project 6 90035094 90046174 - MGP_CBAJ_P0077911 Mthfd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077912.1 MGP_CBAJ_G0030594.1 mouse_genomes_project 6 90035250 90037930 - Mthfd2 protein_coding retained_intron MGP_CBAJ_T0077913.1 MGP_CBAJ_G0030594.1 mouse_genomes_project 6 90037956 90039171 - Mthfd2 protein_coding retained_intron MGP_CBAJ_T0077914.1 MGP_CBAJ_G0030594.1 mouse_genomes_project 6 90038174 90040216 - Mthfd2 protein_coding retained_intron MGP_CBAJ_T0077915.1 MGP_CBAJ_G0030594.1 mouse_genomes_project 6 90039967 90041028 - Mthfd2 protein_coding retained_intron MGP_CBAJ_T0077916.1 MGP_CBAJ_G0030594.1 mouse_genomes_project 6 90040493 90056922 - MGP_CBAJ_P0077916 Mthfd2 protein_coding protein_coding MGP_CBAJ_T0101982.1 MGP_CBAJ_G0040013.1 mouse_genomes_project 6 44007703 44007767 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0102032.1 MGP_CBAJ_G0040062.1 mouse_genomes_project 6 143148110 143173433 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0078899.1 MGP_CBAJ_G0030785.1 mouse_genomes_project 6 123580236 123591073 - MGP_CBAJ_P0078899 Tada3 protein_coding protein_coding MGP_CBAJ_T0078900.1 MGP_CBAJ_G0030785.1 mouse_genomes_project 6 123580249 123591123 - MGP_CBAJ_P0078900 Tada3 protein_coding protein_coding MGP_CBAJ_T0078901.1 MGP_CBAJ_G0030785.1 mouse_genomes_project 6 123580497 123584719 - Tada3 protein_coding retained_intron MGP_CBAJ_T0078902.1 MGP_CBAJ_G0030785.1 mouse_genomes_project 6 123587942 123591295 - Tada3 protein_coding retained_intron MGP_CBAJ_T0078903.1 MGP_CBAJ_G0030785.1 mouse_genomes_project 6 123588038 123591295 - Tada3 protein_coding retained_intron MGP_CBAJ_T0078904.1 MGP_CBAJ_G0030785.1 mouse_genomes_project 6 123589560 123591312 - MGP_CBAJ_P0078904 Tada3 protein_coding protein_coding MGP_CBAJ_T0078986.1 MGP_CBAJ_G0030802.1 mouse_genomes_project 6 123973210 123976934 - MGP_CBAJ_P0078986 Ghrl protein_coding protein_coding MGP_CBAJ_T0078987.1 MGP_CBAJ_G0030802.1 mouse_genomes_project 6 123973210 123974784 - MGP_CBAJ_P0078987 Ghrl protein_coding protein_coding MGP_CBAJ_T0078988.1 MGP_CBAJ_G0030802.1 mouse_genomes_project 6 123973215 123976512 - MGP_CBAJ_P0078988 Ghrl protein_coding protein_coding MGP_CBAJ_T0078989.1 MGP_CBAJ_G0030802.1 mouse_genomes_project 6 123973223 123976902 - MGP_CBAJ_P0078989 Ghrl protein_coding protein_coding MGP_CBAJ_T0078990.1 MGP_CBAJ_G0030802.1 mouse_genomes_project 6 123973263 123976501 - MGP_CBAJ_P0078990 Ghrl protein_coding protein_coding MGP_CBAJ_T0078991.1 MGP_CBAJ_G0030802.1 mouse_genomes_project 6 123973341 123976483 - MGP_CBAJ_P0078991 Ghrl protein_coding protein_coding MGP_CBAJ_T0078992.1 MGP_CBAJ_G0030802.1 mouse_genomes_project 6 123976230 123976508 - Ghrl protein_coding retained_intron MGP_CBAJ_T0076647.1 MGP_CBAJ_G0030268.1 mouse_genomes_project 6 39922708 40003151 - MGP_CBAJ_P0076647 Kdm7a protein_coding protein_coding MGP_CBAJ_T0076648.1 MGP_CBAJ_G0030268.1 mouse_genomes_project 6 39930353 39946079 - Kdm7a protein_coding processed_transcript MGP_CBAJ_T0101979.1 MGP_CBAJ_G0040010.1 mouse_genomes_project 6 42717683 42719214 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0075788.1 MGP_CBAJ_G0030105.1 mouse_genomes_project 6 1787884 2087805 + MGP_CBAJ_P0075788 Ppp1r9a protein_coding protein_coding MGP_CBAJ_T0075789.1 MGP_CBAJ_G0030105.1 mouse_genomes_project 6 1787941 1987872 + MGP_CBAJ_P0075789 Ppp1r9a protein_coding protein_coding MGP_CBAJ_T0075790.1 MGP_CBAJ_G0030105.1 mouse_genomes_project 6 1787985 2088436 + MGP_CBAJ_P0075790 Ppp1r9a protein_coding nonsense_mediated_decay MGP_CBAJ_T0075791.1 MGP_CBAJ_G0030105.1 mouse_genomes_project 6 1788212 2093864 + MGP_CBAJ_P0075791 Ppp1r9a protein_coding protein_coding MGP_CBAJ_T0075792.1 MGP_CBAJ_G0030105.1 mouse_genomes_project 6 1788243 1916974 + MGP_CBAJ_P0075792 Ppp1r9a protein_coding protein_coding MGP_CBAJ_T0075793.1 MGP_CBAJ_G0030105.1 mouse_genomes_project 6 1788302 2092721 + Ppp1r9a protein_coding retained_intron MGP_CBAJ_T0075794.1 MGP_CBAJ_G0030105.1 mouse_genomes_project 6 1788658 1791658 + MGP_CBAJ_P0075794 Ppp1r9a protein_coding protein_coding MGP_CBAJ_T0075795.1 MGP_CBAJ_G0030105.1 mouse_genomes_project 6 1790286 2088024 + MGP_CBAJ_P0075795 Ppp1r9a protein_coding nonsense_mediated_decay MGP_CBAJ_T0075796.1 MGP_CBAJ_G0030105.1 mouse_genomes_project 6 1790286 2088032 + MGP_CBAJ_P0075796 Ppp1r9a protein_coding protein_coding MGP_CBAJ_T0075797.1 MGP_CBAJ_G0030105.1 mouse_genomes_project 6 1791277 2082465 + MGP_CBAJ_P0075797 Ppp1r9a protein_coding nonsense_mediated_decay MGP_CBAJ_T0075798.1 MGP_CBAJ_G0030105.1 mouse_genomes_project 6 2023705 2026834 + Ppp1r9a protein_coding processed_transcript MGP_CBAJ_T0075799.1 MGP_CBAJ_G0030105.1 mouse_genomes_project 6 2026505 2029555 + Ppp1r9a protein_coding retained_intron MGP_CBAJ_T0077305.1 MGP_CBAJ_G0030446.1 mouse_genomes_project 6 59070689 59401878 - MGP_CBAJ_P0077305 Pde1c protein_coding protein_coding MGP_CBAJ_T0077306.1 MGP_CBAJ_G0030446.1 mouse_genomes_project 6 59072646 59606703 - MGP_CBAJ_P0077306 Pde1c protein_coding protein_coding MGP_CBAJ_T0077307.1 MGP_CBAJ_G0030446.1 mouse_genomes_project 6 59073256 59401341 - Pde1c protein_coding processed_transcript MGP_CBAJ_T0077308.1 MGP_CBAJ_G0030446.1 mouse_genomes_project 6 59078692 59402005 - MGP_CBAJ_P0077308 Pde1c protein_coding protein_coding MGP_CBAJ_T0077309.1 MGP_CBAJ_G0030446.1 mouse_genomes_project 6 59082772 59410710 - MGP_CBAJ_P0077309 Pde1c protein_coding protein_coding MGP_CBAJ_T0077310.1 MGP_CBAJ_G0030446.1 mouse_genomes_project 6 59082887 59130969 - MGP_CBAJ_P0077310 Pde1c protein_coding nonsense_mediated_decay MGP_CBAJ_T0077311.1 MGP_CBAJ_G0030446.1 mouse_genomes_project 6 59082940 59410729 - MGP_CBAJ_P0077311 Pde1c protein_coding protein_coding MGP_CBAJ_T0077312.1 MGP_CBAJ_G0030446.1 mouse_genomes_project 6 59108413 59401797 - MGP_CBAJ_P0077312 Pde1c protein_coding protein_coding MGP_CBAJ_T0077313.1 MGP_CBAJ_G0030446.1 mouse_genomes_project 6 59111975 59410758 - MGP_CBAJ_P0077313 Pde1c protein_coding protein_coding MGP_CBAJ_T0077314.1 MGP_CBAJ_G0030446.1 mouse_genomes_project 6 59113685 59403925 - MGP_CBAJ_P0077314 Pde1c protein_coding protein_coding MGP_CBAJ_T0077315.1 MGP_CBAJ_G0030446.1 mouse_genomes_project 6 59114139 59401852 - MGP_CBAJ_P0077315 Pde1c protein_coding protein_coding MGP_CBAJ_T0077316.1 MGP_CBAJ_G0030446.1 mouse_genomes_project 6 59204642 59401860 - Pde1c protein_coding retained_intron MGP_CBAJ_T0077317.1 MGP_CBAJ_G0030446.1 mouse_genomes_project 6 59381294 59401799 - Pde1c protein_coding retained_intron MGP_CBAJ_T0077318.1 MGP_CBAJ_G0030446.1 mouse_genomes_project 6 59384511 59410731 - Pde1c protein_coding retained_intron MGP_CBAJ_T0079912.1 MGP_CBAJ_G0030981.1 mouse_genomes_project 6 140129239 140210288 - MGP_CBAJ_P0079912 Tspan9 protein_coding protein_coding MGP_CBAJ_T0079913.1 MGP_CBAJ_G0030981.1 mouse_genomes_project 6 140133100 140134675 - Tspan9 protein_coding retained_intron MGP_CBAJ_T0079914.1 MGP_CBAJ_G0030981.1 mouse_genomes_project 6 140133619 140210792 - MGP_CBAJ_P0079914 Tspan9 protein_coding protein_coding MGP_CBAJ_T0079915.1 MGP_CBAJ_G0030981.1 mouse_genomes_project 6 140134288 140328587 - MGP_CBAJ_P0079915 Tspan9 protein_coding protein_coding MGP_CBAJ_T0079916.1 MGP_CBAJ_G0030981.1 mouse_genomes_project 6 140134294 140325345 - MGP_CBAJ_P0079916 Tspan9 protein_coding protein_coding MGP_CBAJ_T0079917.1 MGP_CBAJ_G0030981.1 mouse_genomes_project 6 140134938 140328580 - MGP_CBAJ_P0079917 Tspan9 protein_coding protein_coding MGP_CBAJ_T0079918.1 MGP_CBAJ_G0030981.1 mouse_genomes_project 6 140135023 140305343 - MGP_CBAJ_P0079918 Tspan9 protein_coding protein_coding MGP_CBAJ_T0079919.1 MGP_CBAJ_G0030981.1 mouse_genomes_project 6 140257648 140328621 - Tspan9 protein_coding processed_transcript MGP_CBAJ_T0076280.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29469524 29470241 + MGP_CBAJ_P0076280 Ahcyl2 protein_coding protein_coding MGP_CBAJ_T0076281.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29469956 29573499 + Ahcyl2 protein_coding retained_intron MGP_CBAJ_T0076282.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29470005 29619141 + MGP_CBAJ_P0076282 Ahcyl2 protein_coding protein_coding MGP_CBAJ_T0076283.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29470011 29472157 + Ahcyl2 protein_coding retained_intron MGP_CBAJ_T0076284.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29470041 29577520 + MGP_CBAJ_P0076284 Ahcyl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076285.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29470051 29619147 + MGP_CBAJ_P0076285 Ahcyl2 protein_coding protein_coding MGP_CBAJ_T0076286.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29505495 29590615 + MGP_CBAJ_P0076286 Ahcyl2 protein_coding protein_coding MGP_CBAJ_T0076287.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29559846 29616046 + MGP_CBAJ_P0076287 Ahcyl2 protein_coding protein_coding MGP_CBAJ_T0076288.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29559853 29569316 + MGP_CBAJ_P0076288 Ahcyl2 protein_coding protein_coding MGP_CBAJ_T0076289.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29559855 29577532 + MGP_CBAJ_P0076289 Ahcyl2 protein_coding protein_coding MGP_CBAJ_T0076290.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29559860 29587521 + MGP_CBAJ_P0076290 Ahcyl2 protein_coding protein_coding MGP_CBAJ_T0076291.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29559977 29573499 + Ahcyl2 protein_coding retained_intron MGP_CBAJ_T0076292.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29565458 29619135 + MGP_CBAJ_P0076292 Ahcyl2 protein_coding protein_coding MGP_CBAJ_T0076293.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29565764 29590624 + MGP_CBAJ_P0076293 Ahcyl2 protein_coding protein_coding MGP_CBAJ_T0076294.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29565789 29590617 + MGP_CBAJ_P0076294 Ahcyl2 protein_coding protein_coding MGP_CBAJ_T0076295.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29571466 29578122 + Ahcyl2 protein_coding processed_transcript MGP_CBAJ_T0076296.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29577195 29619140 + Ahcyl2 protein_coding retained_intron MGP_CBAJ_T0076297.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29583583 29586011 + Ahcyl2 protein_coding retained_intron MGP_CBAJ_T0076298.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29600719 29603125 + Ahcyl2 protein_coding retained_intron MGP_CBAJ_T0076299.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29603247 29615886 + Ahcyl2 protein_coding retained_intron MGP_CBAJ_T0076300.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29609952 29616038 + Ahcyl2 protein_coding processed_transcript MGP_CBAJ_T0076301.1 MGP_CBAJ_G0030205.1 mouse_genomes_project 6 29610424 29615982 + Ahcyl2 protein_coding processed_transcript MGP_CBAJ_T0078243.1 MGP_CBAJ_G0030652.1 mouse_genomes_project 6 94623475 94628769 - MGP_CBAJ_P0078243 Gkn1 protein_coding protein_coding MGP_CBAJ_T0010620.1 MGP_CBAJ_G0008758.1 mouse_genomes_project 6 486394 486501 - Mir489 miRNA miRNA MGP_CBAJ_T0080067.1 MGP_CBAJ_G0031024.1 mouse_genomes_project 6 142460284 142466439 - Klra5 protein_coding retained_intron MGP_CBAJ_T0080068.1 MGP_CBAJ_G0031024.1 mouse_genomes_project 6 142460284 142482434 - MGP_CBAJ_P0080068 Klra5 protein_coding protein_coding MGP_CBAJ_T0080069.1 MGP_CBAJ_G0031024.1 mouse_genomes_project 6 142460284 142475938 - MGP_CBAJ_P0080069 Klra5 protein_coding protein_coding MGP_CBAJ_T0080070.1 MGP_CBAJ_G0031024.1 mouse_genomes_project 6 142460447 142475880 - MGP_CBAJ_P0080070 Klra5 protein_coding protein_coding MGP_CBAJ_T0015015.1 MGP_CBAJ_G0013127.1 mouse_genomes_project 6 4336029 4336974 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0076980.1 MGP_CBAJ_G0030368.1 mouse_genomes_project 6 50676696 50703649 + MGP_CBAJ_P0076980 Gm45021 protein_coding protein_coding MGP_CBAJ_T0079220.1 MGP_CBAJ_G0030844.1 mouse_genomes_project 6 128648160 128654905 - MGP_CBAJ_P0079220 Fxyd4 protein_coding protein_coding MGP_CBAJ_T0079221.1 MGP_CBAJ_G0030844.1 mouse_genomes_project 6 128648161 128654548 - MGP_CBAJ_P0079221 Fxyd4 protein_coding protein_coding MGP_CBAJ_T0079222.1 MGP_CBAJ_G0030844.1 mouse_genomes_project 6 128648161 128654548 - MGP_CBAJ_P0079222 Fxyd4 protein_coding protein_coding MGP_CBAJ_T0079223.1 MGP_CBAJ_G0030844.1 mouse_genomes_project 6 128648161 128654548 - MGP_CBAJ_P0079223 Fxyd4 protein_coding protein_coding MGP_CBAJ_T0079224.1 MGP_CBAJ_G0030844.1 mouse_genomes_project 6 128648161 128654548 - MGP_CBAJ_P0079224 Fxyd4 protein_coding protein_coding MGP_CBAJ_T0079225.1 MGP_CBAJ_G0030844.1 mouse_genomes_project 6 128648330 128654548 - MGP_CBAJ_P0079225 Fxyd4 protein_coding protein_coding MGP_CBAJ_T0079226.1 MGP_CBAJ_G0030844.1 mouse_genomes_project 6 128649443 128654548 - Fxyd4 protein_coding retained_intron MGP_CBAJ_T0079227.1 MGP_CBAJ_G0030844.1 mouse_genomes_project 6 128649453 128653166 - Fxyd4 protein_coding retained_intron MGP_CBAJ_T0079228.1 MGP_CBAJ_G0030844.1 mouse_genomes_project 6 128649455 128654548 - Fxyd4 protein_coding retained_intron MGP_CBAJ_T0015262.1 MGP_CBAJ_G0013374.1 mouse_genomes_project 6 97298382 97299342 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015109.1 MGP_CBAJ_G0013221.1 mouse_genomes_project 6 50449894 50450765 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0076709.1 MGP_CBAJ_G0030280.1 mouse_genomes_project 6 41418577 41453342 - MGP_CBAJ_P0076709 E330009J07Rik protein_coding protein_coding MGP_CBAJ_T0076710.1 MGP_CBAJ_G0030280.1 mouse_genomes_project 6 41424702 41453340 - MGP_CBAJ_P0076710 E330009J07Rik protein_coding protein_coding MGP_CBAJ_T0076711.1 MGP_CBAJ_G0030280.1 mouse_genomes_project 6 41435850 41448617 - MGP_CBAJ_P0076711 E330009J07Rik protein_coding protein_coding MGP_CBAJ_T0076712.1 MGP_CBAJ_G0030280.1 mouse_genomes_project 6 41440780 41453322 - E330009J07Rik protein_coding retained_intron MGP_CBAJ_T0015275.1 MGP_CBAJ_G0013387.1 mouse_genomes_project 6 102421763 102421982 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015330.1 MGP_CBAJ_G0013442.1 mouse_genomes_project 6 125467481 125467812 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015342.1 MGP_CBAJ_G0013454.1 mouse_genomes_project 6 129409459 129411058 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002637.1 MGP_CBAJ_G0002520.1 mouse_genomes_project 6 42790701 42791382 - MGP_CBAJ_P0002637 Trbv31 TR_V_gene TR_V_gene MGP_CBAJ_T0002638.1 MGP_CBAJ_G0002520.1 mouse_genomes_project 6 42790703 42791463 - MGP_CBAJ_P0002638 Trbv31 TR_V_gene TR_V_gene MGP_CBAJ_T0008537.1 MGP_CBAJ_G0006895.1 mouse_genomes_project 6 88590378 88591374 - Gm44202 lincRNA lincRNA MGP_CBAJ_T0004837.1 MGP_CBAJ_G0004149.1 mouse_genomes_project 6 30389059 30391942 - Gm13781 antisense antisense MGP_CBAJ_T0004997.1 MGP_CBAJ_G0004260.1 mouse_genomes_project 6 136433476 136436780 - Gm15884 antisense antisense MGP_CBAJ_T0015013.1 MGP_CBAJ_G0013125.1 mouse_genomes_project 6 3887924 3888989 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101986.1 MGP_CBAJ_G0040017.1 mouse_genomes_project 6 44517735 44518261 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015420.1 MGP_CBAJ_G0013532.1 mouse_genomes_project 6 150008906 150010092 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0077419.1 MGP_CBAJ_G0030487.1 mouse_genomes_project 6 62632116 62635280 + MGP_CBAJ_P0077419 Tigd2 protein_coding protein_coding MGP_CBAJ_T0076034.1 MGP_CBAJ_G0030150.1 mouse_genomes_project 6 16690953 16755331 - Cttnbp2 protein_coding retained_intron MGP_CBAJ_T0076035.1 MGP_CBAJ_G0030150.1 mouse_genomes_project 6 16691040 16761550 - MGP_CBAJ_P0076035 Cttnbp2 protein_coding protein_coding MGP_CBAJ_T0076036.1 MGP_CBAJ_G0030150.1 mouse_genomes_project 6 16691182 16862319 - MGP_CBAJ_P0076036 Cttnbp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076037.1 MGP_CBAJ_G0030150.1 mouse_genomes_project 6 16691696 16862391 - MGP_CBAJ_P0076037 Cttnbp2 protein_coding protein_coding MGP_CBAJ_T0076038.1 MGP_CBAJ_G0030150.1 mouse_genomes_project 6 16715739 16733699 - MGP_CBAJ_P0076038 Cttnbp2 protein_coding protein_coding MGP_CBAJ_T0076039.1 MGP_CBAJ_G0030150.1 mouse_genomes_project 6 16759038 16862369 - Cttnbp2 protein_coding retained_intron MGP_CBAJ_T0076040.1 MGP_CBAJ_G0030150.1 mouse_genomes_project 6 16762349 16858478 - MGP_CBAJ_P0076040 Cttnbp2 protein_coding protein_coding MGP_CBAJ_T0076041.1 MGP_CBAJ_G0030150.1 mouse_genomes_project 6 16779082 16845403 - MGP_CBAJ_P0076041 Cttnbp2 protein_coding protein_coding MGP_CBAJ_T0076042.1 MGP_CBAJ_G0030150.1 mouse_genomes_project 6 16844972 16862413 - Cttnbp2 protein_coding retained_intron MGP_CBAJ_T0002129.1 MGP_CBAJ_G0002044.1 mouse_genomes_project 6 152724983 152725473 + TEC TEC MGP_CBAJ_T0004920.1 MGP_CBAJ_G0004208.1 mouse_genomes_project 6 90963098 90977166 - Gm15475 antisense antisense MGP_CBAJ_T0004847.1 MGP_CBAJ_G0004158.1 mouse_genomes_project 6 34943719 34943954 - Npn2 antisense antisense MGP_CBAJ_T0004848.1 MGP_CBAJ_G0004158.1 mouse_genomes_project 6 34943878 34943953 - Npn2 antisense antisense MGP_CBAJ_T0077733.1 MGP_CBAJ_G0030556.1 mouse_genomes_project 6 79112508 79113603 - MGP_CBAJ_P0077733 4931417E11Rik protein_coding protein_coding MGP_CBAJ_T0077734.1 MGP_CBAJ_G0030556.1 mouse_genomes_project 6 79112516 79113555 - 4931417E11Rik protein_coding processed_transcript MGP_CBAJ_T0077735.1 MGP_CBAJ_G0030556.1 mouse_genomes_project 6 79112582 79113500 - 4931417E11Rik protein_coding transcribed_processed_pseudogene MGP_CBAJ_T0005546.1 MGP_CBAJ_G0004664.1 mouse_genomes_project 6 125486239 125493550 - Gm17733 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_CBAJ_T0000170.1 MGP_CBAJ_G0000128.1 mouse_genomes_project 6 73518062 73518592 - MGP_CBAJ_P0000170 Igkv4-90 IG_V_gene IG_V_gene MGP_CBAJ_T0004844.1 MGP_CBAJ_G0004155.1 mouse_genomes_project 6 33070670 33075425 + Gm14540 antisense antisense MGP_CBAJ_T0001947.1 MGP_CBAJ_G0001863.1 mouse_genomes_project 6 54845083 54846326 - TEC TEC MGP_CBAJ_T0004953.1 MGP_CBAJ_G0004229.1 mouse_genomes_project 6 99633604 99637328 - 4930466I24Rik antisense antisense MGP_CBAJ_T0015263.1 MGP_CBAJ_G0013375.1 mouse_genomes_project 6 97706698 97707280 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0076263.1 MGP_CBAJ_G0030202.1 mouse_genomes_project 6 29186331 29263517 - MGP_CBAJ_P0076263 Tnpo3 protein_coding protein_coding MGP_CBAJ_T0076264.1 MGP_CBAJ_G0030202.1 mouse_genomes_project 6 29186331 29263797 - MGP_CBAJ_P0076264 Tnpo3 protein_coding protein_coding MGP_CBAJ_T0076265.1 MGP_CBAJ_G0030202.1 mouse_genomes_project 6 29186387 29205577 - MGP_CBAJ_P0076265 Tnpo3 protein_coding protein_coding MGP_CBAJ_T0076267.1 MGP_CBAJ_G0030202.1 mouse_genomes_project 6 29186975 29263721 - MGP_CBAJ_P0076267 Tnpo3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076268.1 MGP_CBAJ_G0030202.1 mouse_genomes_project 6 29200365 29202548 - Tnpo3 protein_coding retained_intron MGP_CBAJ_T0076269.1 MGP_CBAJ_G0030202.1 mouse_genomes_project 6 29210359 29263533 - Tnpo3 protein_coding retained_intron MGP_CBAJ_T0076270.1 MGP_CBAJ_G0030202.1 mouse_genomes_project 6 29213928 29217014 - Tnpo3 protein_coding retained_intron MGP_CBAJ_T0076271.1 MGP_CBAJ_G0030202.1 mouse_genomes_project 6 29226662 29230576 - Tnpo3 protein_coding retained_intron MGP_CBAJ_T0076272.1 MGP_CBAJ_G0030202.1 mouse_genomes_project 6 29228163 29263729 - Tnpo3 protein_coding retained_intron MGP_CBAJ_T0076273.1 MGP_CBAJ_G0030202.1 mouse_genomes_project 6 29231532 29263544 - Tnpo3 protein_coding retained_intron MGP_CBAJ_T0076274.1 MGP_CBAJ_G0030202.1 mouse_genomes_project 6 29237277 29263523 - Tnpo3 protein_coding processed_transcript MGP_CBAJ_T0075767.1 MGP_CBAJ_G0030102.1 mouse_genomes_project 6 1439955 1482585 + MGP_CBAJ_P0075767 Casd1 protein_coding protein_coding MGP_CBAJ_T0075768.1 MGP_CBAJ_G0030102.1 mouse_genomes_project 6 1440065 1464300 + MGP_CBAJ_P0075768 Casd1 protein_coding protein_coding MGP_CBAJ_T0075769.1 MGP_CBAJ_G0030102.1 mouse_genomes_project 6 1440262 1447811 + MGP_CBAJ_P0075769 Casd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075770.1 MGP_CBAJ_G0030102.1 mouse_genomes_project 6 1440319 1461167 + MGP_CBAJ_P0075770 Casd1 protein_coding protein_coding MGP_CBAJ_T0075771.1 MGP_CBAJ_G0030102.1 mouse_genomes_project 6 1470367 1480212 + MGP_CBAJ_P0075771 Casd1 protein_coding protein_coding MGP_CBAJ_T0098071.1 MGP_CBAJ_G0036344.1 mouse_genomes_project 6 30124398 30124494 - Gm25625 rRNA rRNA MGP_CBAJ_T0001940.1 MGP_CBAJ_G0001856.1 mouse_genomes_project 6 47800683 47805052 + TEC TEC MGP_CBAJ_T0080079.1 MGP_CBAJ_G0031030.1 mouse_genomes_project 6 144086724 144114642 - MGP_CBAJ_P0080079 Klra2 protein_coding protein_coding MGP_CBAJ_T0080080.1 MGP_CBAJ_G0031030.1 mouse_genomes_project 6 144087497 144114642 - MGP_CBAJ_P0080080 Klra2 protein_coding protein_coding MGP_CBAJ_T0010694.1 MGP_CBAJ_G0008832.1 mouse_genomes_project 6 142241806 142241915 + Mir680-1 miRNA miRNA MGP_CBAJ_T0078642.1 MGP_CBAJ_G0030739.1 mouse_genomes_project 6 105348097 105387357 - MGP_CBAJ_P0078642 Tmf1 protein_coding protein_coding MGP_CBAJ_T0078643.1 MGP_CBAJ_G0030739.1 mouse_genomes_project 6 105353529 105387272 - MGP_CBAJ_P0078643 Tmf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078644.1 MGP_CBAJ_G0030739.1 mouse_genomes_project 6 105360854 105371760 - Tmf1 protein_coding processed_transcript MGP_CBAJ_T0010632.1 MGP_CBAJ_G0008770.1 mouse_genomes_project 6 30581569 30581667 + Mir335 miRNA miRNA MGP_CBAJ_T0101165.1 MGP_CBAJ_G0039343.1 mouse_genomes_project 6 97586105 97705854 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101166.1 MGP_CBAJ_G0039343.1 mouse_genomes_project 6 97698906 97705825 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0001927.1 MGP_CBAJ_G0001843.1 mouse_genomes_project 6 46810862 46816187 + TEC TEC MGP_CBAJ_T0078993.1 MGP_CBAJ_G0030803.1 mouse_genomes_project 6 123985106 124001605 - MGP_CBAJ_P0078993 Sec13 protein_coding protein_coding MGP_CBAJ_T0078994.1 MGP_CBAJ_G0030803.1 mouse_genomes_project 6 123987499 123995932 - Sec13 protein_coding retained_intron MGP_CBAJ_T0078995.1 MGP_CBAJ_G0030803.1 mouse_genomes_project 6 123987665 123995932 - Sec13 protein_coding retained_intron MGP_CBAJ_T0078996.1 MGP_CBAJ_G0030803.1 mouse_genomes_project 6 123999990 124001589 - Sec13 protein_coding retained_intron MGP_CBAJ_T0078433.1 MGP_CBAJ_G0030690.1 mouse_genomes_project 6 97339097 97347587 - MGP_CBAJ_P0078433 Vmn1r45 protein_coding protein_coding MGP_CBAJ_T0008585.1 MGP_CBAJ_G0006928.1 mouse_genomes_project 6 109174031 109183312 + 1700049E22Rik lincRNA lincRNA MGP_CBAJ_T0002013.1 MGP_CBAJ_G0001929.1 mouse_genomes_project 6 93824162 93826136 + TEC TEC MGP_CBAJ_T0015175.1 MGP_CBAJ_G0013287.1 mouse_genomes_project 6 70275100 70275794 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002082.1 MGP_CBAJ_G0001998.1 mouse_genomes_project 6 123212695 123214806 - TEC TEC MGP_CBAJ_T0001951.1 MGP_CBAJ_G0001867.1 mouse_genomes_project 6 55371328 55371940 - TEC TEC MGP_CBAJ_T0076258.1 MGP_CBAJ_G0030201.1 mouse_genomes_project 6 29172126 29182820 + MGP_CBAJ_P0076258 Irf5 protein_coding protein_coding MGP_CBAJ_T0076259.1 MGP_CBAJ_G0030201.1 mouse_genomes_project 6 29172209 29187276 + MGP_CBAJ_P0076259 Irf5 protein_coding protein_coding MGP_CBAJ_T0076260.1 MGP_CBAJ_G0030201.1 mouse_genomes_project 6 29173771 29179498 + MGP_CBAJ_P0076260 Irf5 protein_coding protein_coding MGP_CBAJ_T0076261.1 MGP_CBAJ_G0030201.1 mouse_genomes_project 6 29174781 29182820 + MGP_CBAJ_P0076261 Irf5 protein_coding protein_coding MGP_CBAJ_T0076262.1 MGP_CBAJ_G0030201.1 mouse_genomes_project 6 29176748 29180847 + MGP_CBAJ_P0076262 Irf5 protein_coding protein_coding MGP_CBAJ_T0076266.1 MGP_CBAJ_G0030201.1 mouse_genomes_project 6 29186551 29187263 + Irf5 protein_coding processed_transcript MGP_CBAJ_T0078039.1 MGP_CBAJ_G0030615.1 mouse_genomes_project 6 92215141 92236569 + MGP_CBAJ_P0078039 Emx1 protein_coding protein_coding MGP_CBAJ_T0078040.1 MGP_CBAJ_G0030615.1 mouse_genomes_project 6 92225688 92236673 + Emx1 protein_coding retained_intron MGP_CBAJ_T0002142.1 MGP_CBAJ_G0002057.1 mouse_genomes_project 6 160918470 160921340 + TEC TEC MGP_CBAJ_T0077352.1 MGP_CBAJ_G0030459.1 mouse_genomes_project 6 60333201 60334136 + MGP_CBAJ_P0077352 Vmn1r12 protein_coding protein_coding MGP_CBAJ_T0079370.1 MGP_CBAJ_G0030866.1 mouse_genomes_project 6 131418226 131478295 + MGP_CBAJ_P0079370 Kdm5a protein_coding nonsense_mediated_decay MGP_CBAJ_T0079371.1 MGP_CBAJ_G0030866.1 mouse_genomes_project 6 131418226 131516019 + MGP_CBAJ_P0079371 Kdm5a protein_coding protein_coding MGP_CBAJ_T0079372.1 MGP_CBAJ_G0030866.1 mouse_genomes_project 6 131418234 131423715 + Kdm5a protein_coding retained_intron MGP_CBAJ_T0079373.1 MGP_CBAJ_G0030866.1 mouse_genomes_project 6 131418560 131478268 + MGP_CBAJ_P0079373 Kdm5a protein_coding nonsense_mediated_decay MGP_CBAJ_T0079374.1 MGP_CBAJ_G0030866.1 mouse_genomes_project 6 131428923 131446720 + MGP_CBAJ_P0079374 Kdm5a protein_coding protein_coding MGP_CBAJ_T0079375.1 MGP_CBAJ_G0030866.1 mouse_genomes_project 6 131464542 131472531 + Kdm5a protein_coding retained_intron MGP_CBAJ_T0079376.1 MGP_CBAJ_G0030866.1 mouse_genomes_project 6 131498684 131501728 + Kdm5a protein_coding retained_intron MGP_CBAJ_T0079377.1 MGP_CBAJ_G0030866.1 mouse_genomes_project 6 131501268 131503500 + Kdm5a protein_coding retained_intron MGP_CBAJ_T0079378.1 MGP_CBAJ_G0030866.1 mouse_genomes_project 6 131501649 131511156 + Kdm5a protein_coding processed_transcript MGP_CBAJ_T0015134.1 MGP_CBAJ_G0013246.1 mouse_genomes_project 6 55864472 55865658 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015162.1 MGP_CBAJ_G0013274.1 mouse_genomes_project 6 69268733 69269165 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0079545.1 MGP_CBAJ_G0030904.1 mouse_genomes_project 6 134821222 134834025 + MGP_CBAJ_P0079545 Clec4d protein_coding nonsense_mediated_decay MGP_CBAJ_T0079546.1 MGP_CBAJ_G0030904.1 mouse_genomes_project 6 134821228 134834367 + MGP_CBAJ_P0079546 Clec4d protein_coding protein_coding MGP_CBAJ_T0079547.1 MGP_CBAJ_G0030904.1 mouse_genomes_project 6 134826833 134833814 + Clec4d protein_coding retained_intron MGP_CBAJ_T0077536.1 MGP_CBAJ_G0030517.1 mouse_genomes_project 6 76044881 76111324 + MGP_CBAJ_P0077536 Eif2ak3 protein_coding protein_coding MGP_CBAJ_T0077537.1 MGP_CBAJ_G0030517.1 mouse_genomes_project 6 76044919 76065108 + MGP_CBAJ_P0077537 Eif2ak3 protein_coding protein_coding MGP_CBAJ_T0077538.1 MGP_CBAJ_G0030517.1 mouse_genomes_project 6 76044922 76045986 + Eif2ak3 protein_coding retained_intron MGP_CBAJ_T0077539.1 MGP_CBAJ_G0030517.1 mouse_genomes_project 6 76083340 76098008 + Eif2ak3 protein_coding retained_intron MGP_CBAJ_T0077540.1 MGP_CBAJ_G0030517.1 mouse_genomes_project 6 76101333 76104828 + Eif2ak3 protein_coding retained_intron MGP_CBAJ_T0011543.1 MGP_CBAJ_G0009681.1 mouse_genomes_project 6 139990974 139991273 + Gm23098 misc_RNA misc_RNA MGP_CBAJ_T0008450.1 MGP_CBAJ_G0006829.1 mouse_genomes_project 6 32085459 32086543 + Gm13850 lincRNA lincRNA MGP_CBAJ_T0008626.1 MGP_CBAJ_G0006965.1 mouse_genomes_project 6 140027158 140030792 - Gm42810 lincRNA lincRNA MGP_CBAJ_T0008679.1 MGP_CBAJ_G0007000.1 mouse_genomes_project 6 163425072 163426279 - Gm17216 lincRNA lincRNA MGP_CBAJ_T0102045.1 MGP_CBAJ_G0040075.1 mouse_genomes_project 6 146562077 146563711 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0079248.1 MGP_CBAJ_G0030851.1 mouse_genomes_project 6 129285126 129351265 - MGP_CBAJ_P0079248 Ankrd26 protein_coding protein_coding MGP_CBAJ_T0079249.1 MGP_CBAJ_G0030851.1 mouse_genomes_project 6 129304170 129309221 - Ankrd26 protein_coding retained_intron MGP_CBAJ_T0079250.1 MGP_CBAJ_G0030851.1 mouse_genomes_project 6 129331076 129338136 - Ankrd26 protein_coding retained_intron MGP_CBAJ_T0079548.1 MGP_CBAJ_G0030905.1 mouse_genomes_project 6 134842733 134850820 - MGP_CBAJ_P0079548 Clec4e protein_coding protein_coding MGP_CBAJ_T0079549.1 MGP_CBAJ_G0030905.1 mouse_genomes_project 6 134842893 134850819 - Clec4e protein_coding retained_intron MGP_CBAJ_T0079550.1 MGP_CBAJ_G0030905.1 mouse_genomes_project 6 134843089 134850820 - Clec4e protein_coding retained_intron MGP_CBAJ_T0079551.1 MGP_CBAJ_G0030905.1 mouse_genomes_project 6 134843612 134850820 - Clec4e protein_coding retained_intron MGP_CBAJ_T0079552.1 MGP_CBAJ_G0030905.1 mouse_genomes_project 6 134844435 134850820 - MGP_CBAJ_P0079552 Clec4e protein_coding protein_coding MGP_CBAJ_T0079553.1 MGP_CBAJ_G0030905.1 mouse_genomes_project 6 134844638 134850816 - MGP_CBAJ_P0079553 Clec4e protein_coding nonsense_mediated_decay MGP_CBAJ_T0079554.1 MGP_CBAJ_G0030905.1 mouse_genomes_project 6 134848721 134850820 - Clec4e protein_coding processed_transcript MGP_CBAJ_T0079582.1 MGP_CBAJ_G0030918.1 mouse_genomes_project 6 136321945 136336198 - MGP_CBAJ_P0079582 C1s2 protein_coding protein_coding MGP_CBAJ_T0079583.1 MGP_CBAJ_G0030918.1 mouse_genomes_project 6 136321948 136337039 - MGP_CBAJ_P0079583 C1s2 protein_coding protein_coding MGP_CBAJ_T0080063.1 MGP_CBAJ_G0031022.1 mouse_genomes_project 6 142335401 142344632 - MGP_CBAJ_P0080063 Gm156 protein_coding protein_coding MGP_CBAJ_T0080064.1 MGP_CBAJ_G0031022.1 mouse_genomes_project 6 142335409 142352214 - MGP_CBAJ_P0080064 Gm156 protein_coding protein_coding MGP_CBAJ_T0017969.1 MGP_CBAJ_G0015365.1 mouse_genomes_project 6 5726195 5750142 - A430035B10Rik processed_transcript processed_transcript MGP_CBAJ_T0017970.1 MGP_CBAJ_G0015365.1 mouse_genomes_project 6 5727333 5735380 - A430035B10Rik processed_transcript processed_transcript MGP_CBAJ_T0017971.1 MGP_CBAJ_G0015365.1 mouse_genomes_project 6 5728440 5746479 - A430035B10Rik processed_transcript processed_transcript MGP_CBAJ_T0017972.1 MGP_CBAJ_G0015365.1 mouse_genomes_project 6 5729822 5746422 - A430035B10Rik processed_transcript retained_intron MGP_CBAJ_T0017973.1 MGP_CBAJ_G0015365.1 mouse_genomes_project 6 5744459 5746539 - A430035B10Rik processed_transcript processed_transcript MGP_CBAJ_T0002624.1 MGP_CBAJ_G0002511.1 mouse_genomes_project 6 42263446 42263937 + MGP_CBAJ_P0002624 Trbv16 TR_V_gene TR_V_gene MGP_CBAJ_T0004828.1 MGP_CBAJ_G0004141.1 mouse_genomes_project 6 15381870 15587097 - Gm15581 antisense antisense MGP_CBAJ_T0080037.1 MGP_CBAJ_G0031013.1 mouse_genomes_project 6 142084811 142093699 + MGP_CBAJ_P0080037 Gabarapl1 protein_coding protein_coding MGP_CBAJ_T0008505.1 MGP_CBAJ_G0006866.1 mouse_genomes_project 6 56575894 56578071 + Gm16499 lincRNA lincRNA MGP_CBAJ_T0008506.1 MGP_CBAJ_G0006866.1 mouse_genomes_project 6 56575895 56575961 + Gm16499 lincRNA lincRNA MGP_CBAJ_T0076424.1 MGP_CBAJ_G0030226.1 mouse_genomes_project 6 32796073 32904471 - MGP_CBAJ_P0076424 Chchd3 protein_coding protein_coding MGP_CBAJ_T0076425.1 MGP_CBAJ_G0030226.1 mouse_genomes_project 6 32797314 33092171 - MGP_CBAJ_P0076425 Chchd3 protein_coding protein_coding MGP_CBAJ_T0076426.1 MGP_CBAJ_G0030226.1 mouse_genomes_project 6 32797321 33092147 - MGP_CBAJ_P0076426 Chchd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076427.1 MGP_CBAJ_G0030226.1 mouse_genomes_project 6 32797734 32911395 - Chchd3 protein_coding processed_transcript MGP_CBAJ_T0076428.1 MGP_CBAJ_G0030226.1 mouse_genomes_project 6 32797739 32911352 - Chchd3 protein_coding processed_transcript MGP_CBAJ_T0076429.1 MGP_CBAJ_G0030226.1 mouse_genomes_project 6 32797740 32911345 - Chchd3 protein_coding processed_transcript MGP_CBAJ_T0076430.1 MGP_CBAJ_G0030226.1 mouse_genomes_project 6 32797751 32813779 - Chchd3 protein_coding processed_transcript MGP_CBAJ_T0076431.1 MGP_CBAJ_G0030226.1 mouse_genomes_project 6 32797791 32830194 - Chchd3 protein_coding processed_transcript MGP_CBAJ_T0076432.1 MGP_CBAJ_G0030226.1 mouse_genomes_project 6 32813774 33092148 - MGP_CBAJ_P0076432 Chchd3 protein_coding protein_coding MGP_CBAJ_T0076433.1 MGP_CBAJ_G0030226.1 mouse_genomes_project 6 32863108 33092128 - MGP_CBAJ_P0076433 Chchd3 protein_coding protein_coding MGP_CBAJ_T0080112.1 MGP_CBAJ_G0031047.1 mouse_genomes_project 6 145828122 145829156 - MGP_CBAJ_P0080112 Tas2r115 protein_coding protein_coding MGP_CBAJ_T0004832.1 MGP_CBAJ_G0004145.1 mouse_genomes_project 6 20565808 20566874 + Gm42582 antisense antisense MGP_CBAJ_T0079556.1 MGP_CBAJ_G0030907.1 mouse_genomes_project 6 135329754 135371572 + MGP_CBAJ_P0079556 Vmn2r23 protein_coding protein_coding MGP_CBAJ_T0076752.1 MGP_CBAJ_G0030300.1 mouse_genomes_project 6 42568501 42583228 + MGP_CBAJ_P0076752 protein_coding protein_coding MGP_CBAJ_T0015002.1 MGP_CBAJ_G0013114.1 mouse_genomes_project 6 23669 25076 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0080110.1 MGP_CBAJ_G0031045.1 mouse_genomes_project 6 145790059 145790977 - MGP_CBAJ_P0080110 Tas2r121 protein_coding protein_coding MGP_CBAJ_T0076399.1 MGP_CBAJ_G0030220.1 mouse_genomes_project 6 30787884 30794402 - Tsga13 protein_coding processed_transcript MGP_CBAJ_T0076400.1 MGP_CBAJ_G0030220.1 mouse_genomes_project 6 30787884 30808396 - MGP_CBAJ_P0076400 Tsga13 protein_coding protein_coding MGP_CBAJ_T0076401.1 MGP_CBAJ_G0030220.1 mouse_genomes_project 6 30788118 30791435 - Tsga13 protein_coding retained_intron MGP_CBAJ_T0078950.1 MGP_CBAJ_G0030794.1 mouse_genomes_project 6 123713541 123721702 - MGP_CBAJ_P0078950 Prrt3 protein_coding protein_coding MGP_CBAJ_T0078951.1 MGP_CBAJ_G0030794.1 mouse_genomes_project 6 123713827 123721750 - MGP_CBAJ_P0078951 Prrt3 protein_coding protein_coding MGP_CBAJ_T0078952.1 MGP_CBAJ_G0030794.1 mouse_genomes_project 6 123713997 123721637 - MGP_CBAJ_P0078952 Prrt3 protein_coding protein_coding MGP_CBAJ_T0078953.1 MGP_CBAJ_G0030794.1 mouse_genomes_project 6 123716170 123721706 - MGP_CBAJ_P0078953 Prrt3 protein_coding protein_coding MGP_CBAJ_T0078954.1 MGP_CBAJ_G0030794.1 mouse_genomes_project 6 123716202 123721712 - MGP_CBAJ_P0078954 Prrt3 protein_coding protein_coding MGP_CBAJ_T0078604.1 MGP_CBAJ_G0030730.1 mouse_genomes_project 6 102444723 102561264 + MGP_CBAJ_P0078604 Slc25a26 protein_coding protein_coding MGP_CBAJ_T0078605.1 MGP_CBAJ_G0030730.1 mouse_genomes_project 6 102444725 102560646 + MGP_CBAJ_P0078605 Slc25a26 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078606.1 MGP_CBAJ_G0030730.1 mouse_genomes_project 6 102444761 102561264 + MGP_CBAJ_P0078606 Slc25a26 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078607.1 MGP_CBAJ_G0030730.1 mouse_genomes_project 6 102444941 102455226 + Slc25a26 protein_coding processed_transcript MGP_CBAJ_T0078608.1 MGP_CBAJ_G0030730.1 mouse_genomes_project 6 102451943 102550663 + MGP_CBAJ_P0078608 Slc25a26 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078609.1 MGP_CBAJ_G0030730.1 mouse_genomes_project 6 102481909 102560454 + Slc25a26 protein_coding processed_transcript MGP_CBAJ_T0078610.1 MGP_CBAJ_G0030730.1 mouse_genomes_project 6 102530379 102560174 + Slc25a26 protein_coding processed_transcript MGP_CBAJ_T0002046.1 MGP_CBAJ_G0001962.1 mouse_genomes_project 6 99279804 99281480 - TEC TEC MGP_CBAJ_T0015304.1 MGP_CBAJ_G0013416.1 mouse_genomes_project 6 116808233 116808459 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0079999.1 MGP_CBAJ_G0031002.1 mouse_genomes_project 6 141526033 141538086 + MGP_CBAJ_P0079999 Klrb1f protein_coding protein_coding MGP_CBAJ_T0080000.1 MGP_CBAJ_G0031002.1 mouse_genomes_project 6 141526033 141538086 + MGP_CBAJ_P0080000 Klrb1f protein_coding nonsense_mediated_decay MGP_CBAJ_T0080001.1 MGP_CBAJ_G0031002.1 mouse_genomes_project 6 141526052 141537331 + MGP_CBAJ_P0080001 Klrb1f protein_coding nonsense_mediated_decay MGP_CBAJ_T0080002.1 MGP_CBAJ_G0031002.1 mouse_genomes_project 6 141526057 141532614 + Klrb1f protein_coding retained_intron MGP_CBAJ_T0080003.1 MGP_CBAJ_G0031002.1 mouse_genomes_project 6 141526059 141533687 + MGP_CBAJ_P0080003 Klrb1f protein_coding protein_coding MGP_CBAJ_T0077197.1 MGP_CBAJ_G0030422.1 mouse_genomes_project 6 55435522 55586077 - Jazf1 protein_coding processed_transcript MGP_CBAJ_T0077198.1 MGP_CBAJ_G0030422.1 mouse_genomes_project 6 55435522 55445035 - Jazf1 protein_coding processed_transcript MGP_CBAJ_T0077199.1 MGP_CBAJ_G0030422.1 mouse_genomes_project 6 55435522 55747502 - MGP_CBAJ_P0077199 Jazf1 protein_coding protein_coding MGP_CBAJ_T0004872.1 MGP_CBAJ_G0004177.1 mouse_genomes_project 6 54747276 54748588 + Gm15050 antisense antisense MGP_CBAJ_T0079654.1 MGP_CBAJ_G0030931.1 mouse_genomes_project 6 136531390 136536210 - MGP_CBAJ_P0079654 Tpi1 protein_coding protein_coding MGP_CBAJ_T0079655.1 MGP_CBAJ_G0030931.1 mouse_genomes_project 6 136532925 136535030 - MGP_CBAJ_P0079655 Tpi1 protein_coding protein_coding MGP_CBAJ_T0079656.1 MGP_CBAJ_G0030931.1 mouse_genomes_project 6 136534200 136534789 - Tpi1 protein_coding retained_intron MGP_CBAJ_T0079657.1 MGP_CBAJ_G0030931.1 mouse_genomes_project 6 136535423 136536068 - Tpi1 protein_coding retained_intron MGP_CBAJ_T0080487.1 MGP_CBAJ_G0031138.1 mouse_genomes_project 6 158544219 158970771 - MGP_CBAJ_P0080487 Sox5 protein_coding protein_coding MGP_CBAJ_T0080488.1 MGP_CBAJ_G0031138.1 mouse_genomes_project 6 158544219 158970679 - MGP_CBAJ_P0080488 Sox5 protein_coding protein_coding MGP_CBAJ_T0080489.1 MGP_CBAJ_G0031138.1 mouse_genomes_project 6 158552076 158970754 - MGP_CBAJ_P0080489 Sox5 protein_coding protein_coding MGP_CBAJ_T0080490.1 MGP_CBAJ_G0031138.1 mouse_genomes_project 6 158553296 158681504 - MGP_CBAJ_P0080490 Sox5 protein_coding protein_coding MGP_CBAJ_T0080491.1 MGP_CBAJ_G0031138.1 mouse_genomes_project 6 158553431 158970651 - MGP_CBAJ_P0080491 Sox5 protein_coding protein_coding MGP_CBAJ_T0080492.1 MGP_CBAJ_G0031138.1 mouse_genomes_project 6 158559900 158681499 - Sox5 protein_coding processed_transcript MGP_CBAJ_T0080493.1 MGP_CBAJ_G0031138.1 mouse_genomes_project 6 158565942 159634590 - Sox5 protein_coding retained_intron MGP_CBAJ_T0080494.1 MGP_CBAJ_G0031138.1 mouse_genomes_project 6 158567018 158681495 - MGP_CBAJ_P0080494 Sox5 protein_coding protein_coding MGP_CBAJ_T0080495.1 MGP_CBAJ_G0031138.1 mouse_genomes_project 6 158586124 158681486 - MGP_CBAJ_P0080495 Sox5 protein_coding protein_coding MGP_CBAJ_T0080496.1 MGP_CBAJ_G0031138.1 mouse_genomes_project 6 158636132 158965620 - Sox5 protein_coding retained_intron MGP_CBAJ_T0080497.1 MGP_CBAJ_G0031138.1 mouse_genomes_project 6 158767315 158970679 - Sox5 protein_coding retained_intron MGP_CBAJ_T0080498.1 MGP_CBAJ_G0031138.1 mouse_genomes_project 6 158860724 159634547 - Sox5 protein_coding processed_transcript MGP_CBAJ_T0080499.1 MGP_CBAJ_G0031138.1 mouse_genomes_project 6 158872773 158965250 - Sox5 protein_coding processed_transcript MGP_CBAJ_T0080500.1 MGP_CBAJ_G0031138.1 mouse_genomes_project 6 158911234 158970771 - Sox5 protein_coding retained_intron MGP_CBAJ_T0015066.1 MGP_CBAJ_G0013178.1 mouse_genomes_project 6 29670458 29671611 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015194.1 MGP_CBAJ_G0013306.1 mouse_genomes_project 6 72085166 72085330 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015142.1 MGP_CBAJ_G0013254.1 mouse_genomes_project 6 61842316 61842746 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0076783.1 MGP_CBAJ_G0030314.1 mouse_genomes_project 6 43437447 43438407 + MGP_CBAJ_P0076783 Tas2r144 protein_coding protein_coding MGP_CBAJ_T0080028.1 MGP_CBAJ_G0031011.1 mouse_genomes_project 6 142029465 142057742 - MGP_CBAJ_P0080028 Olr1 protein_coding protein_coding MGP_CBAJ_T0080029.1 MGP_CBAJ_G0031011.1 mouse_genomes_project 6 142034115 142057684 - MGP_CBAJ_P0080029 Olr1 protein_coding protein_coding MGP_CBAJ_T0080030.1 MGP_CBAJ_G0031011.1 mouse_genomes_project 6 142034115 142057684 - MGP_CBAJ_P0080030 Olr1 protein_coding protein_coding MGP_CBAJ_T0080031.1 MGP_CBAJ_G0031011.1 mouse_genomes_project 6 142034154 142045688 - MGP_CBAJ_P0080031 Olr1 protein_coding protein_coding MGP_CBAJ_T0080032.1 MGP_CBAJ_G0031011.1 mouse_genomes_project 6 142050498 142057742 - MGP_CBAJ_P0080032 Olr1 protein_coding protein_coding MGP_CBAJ_T0000051.1 MGP_CBAJ_G0000040.1 mouse_genomes_project 6 44256504 44256965 + MGP_CBAJ_P0000051 Gm17472 IG_LV_gene IG_LV_gene MGP_CBAJ_T0078730.1 MGP_CBAJ_G0030756.1 mouse_genomes_project 6 111014666 111018197 - Cntn3 protein_coding retained_intron MGP_CBAJ_T0078731.1 MGP_CBAJ_G0030756.1 mouse_genomes_project 6 111015315 111487863 - MGP_CBAJ_P0078731 Cntn3 protein_coding protein_coding MGP_CBAJ_T0078732.1 MGP_CBAJ_G0030756.1 mouse_genomes_project 6 111015317 111356697 - MGP_CBAJ_P0078732 Cntn3 protein_coding protein_coding MGP_CBAJ_T0079943.1 MGP_CBAJ_G0030986.1 mouse_genomes_project 6 140639594 140651181 + MGP_CBAJ_P0079943 4933413G19Rik protein_coding protein_coding MGP_CBAJ_T0079944.1 MGP_CBAJ_G0030986.1 mouse_genomes_project 6 140639594 140651844 + MGP_CBAJ_P0079944 4933413G19Rik protein_coding protein_coding MGP_CBAJ_T0077388.1 MGP_CBAJ_G0030480.1 mouse_genomes_project 6 61632976 61634061 + MGP_CBAJ_P0077388 Vmn1r28 protein_coding protein_coding MGP_CBAJ_T0000284.1 MGP_CBAJ_G0000229.1 mouse_genomes_project 6 73678225 73678855 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0002152.1 MGP_CBAJ_G0002067.1 mouse_genomes_project 6 164356908 164359667 - TEC TEC MGP_CBAJ_T0010678.1 MGP_CBAJ_G0008816.1 mouse_genomes_project 6 127217894 127217964 - Mir7043 miRNA miRNA MGP_CBAJ_T0004912.1 MGP_CBAJ_G0004205.1 mouse_genomes_project 6 90486519 90511066 - Vax2os antisense antisense MGP_CBAJ_T0004913.1 MGP_CBAJ_G0004205.1 mouse_genomes_project 6 90493814 90509795 - Vax2os antisense antisense MGP_CBAJ_T0004914.1 MGP_CBAJ_G0004205.1 mouse_genomes_project 6 90496705 90498119 - Vax2os antisense antisense MGP_CBAJ_T0004915.1 MGP_CBAJ_G0004205.1 mouse_genomes_project 6 90497055 90498198 - Vax2os antisense antisense MGP_CBAJ_T0004899.1 MGP_CBAJ_G0004197.1 mouse_genomes_project 6 78270354 78278965 + Gm15402 antisense antisense MGP_CBAJ_T0080056.1 MGP_CBAJ_G0031018.1 mouse_genomes_project 6 142216017 142228124 - MGP_CBAJ_P0080056 protein_coding protein_coding MGP_CBAJ_T0076173.1 MGP_CBAJ_G0030185.1 mouse_genomes_project 6 27976782 28411227 + MGP_CBAJ_P0076173 Snd1 protein_coding protein_coding MGP_CBAJ_T0076174.1 MGP_CBAJ_G0030185.1 mouse_genomes_project 6 27976782 28396855 + MGP_CBAJ_P0076174 Snd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076175.1 MGP_CBAJ_G0030185.1 mouse_genomes_project 6 27976793 28460037 + MGP_CBAJ_P0076175 Snd1 protein_coding protein_coding MGP_CBAJ_T0076176.1 MGP_CBAJ_G0030185.1 mouse_genomes_project 6 27976863 27979279 + Snd1 protein_coding retained_intron MGP_CBAJ_T0076177.1 MGP_CBAJ_G0030185.1 mouse_genomes_project 6 27976999 28314433 + MGP_CBAJ_P0076177 Snd1 protein_coding protein_coding MGP_CBAJ_T0076178.1 MGP_CBAJ_G0030185.1 mouse_genomes_project 6 28064497 28240547 + Snd1 protein_coding processed_transcript MGP_CBAJ_T0076180.1 MGP_CBAJ_G0030185.1 mouse_genomes_project 6 28218676 28220855 + Snd1 protein_coding processed_transcript MGP_CBAJ_T0076181.1 MGP_CBAJ_G0030185.1 mouse_genomes_project 6 28219487 28240557 + Snd1 protein_coding processed_transcript MGP_CBAJ_T0076182.1 MGP_CBAJ_G0030185.1 mouse_genomes_project 6 28282066 28394119 + Snd1 protein_coding processed_transcript MGP_CBAJ_T0076183.1 MGP_CBAJ_G0030185.1 mouse_genomes_project 6 28293942 28399349 + Snd1 protein_coding processed_transcript MGP_CBAJ_T0076185.1 MGP_CBAJ_G0030185.1 mouse_genomes_project 6 28366387 28399424 + Snd1 protein_coding processed_transcript MGP_CBAJ_T0076186.1 MGP_CBAJ_G0030185.1 mouse_genomes_project 6 28399158 28408922 + Snd1 protein_coding retained_intron MGP_CBAJ_T0080105.1 MGP_CBAJ_G0031041.1 mouse_genomes_project 6 144653480 144654410 - MGP_CBAJ_P0080105 Tas2r114 protein_coding protein_coding MGP_CBAJ_T0010665.1 MGP_CBAJ_G0008803.1 mouse_genomes_project 6 102562952 102563004 - Mir7041 miRNA miRNA MGP_CBAJ_T0076632.1 MGP_CBAJ_G0030265.1 mouse_genomes_project 6 39441033 39632702 - MGP_CBAJ_P0076632 Hipk2 protein_coding protein_coding MGP_CBAJ_T0076633.1 MGP_CBAJ_G0030265.1 mouse_genomes_project 6 39441033 39632750 - MGP_CBAJ_P0076633 Hipk2 protein_coding protein_coding MGP_CBAJ_T0076634.1 MGP_CBAJ_G0030265.1 mouse_genomes_project 6 39441133 39632596 - MGP_CBAJ_P0076634 Hipk2 protein_coding protein_coding MGP_CBAJ_T0076635.1 MGP_CBAJ_G0030265.1 mouse_genomes_project 6 39482327 39488889 - Hipk2 protein_coding processed_transcript MGP_CBAJ_T0076636.1 MGP_CBAJ_G0030265.1 mouse_genomes_project 6 39492867 39572934 - Hipk2 protein_coding retained_intron MGP_CBAJ_T0076637.1 MGP_CBAJ_G0030265.1 mouse_genomes_project 6 39572494 39593915 - Hipk2 protein_coding retained_intron MGP_CBAJ_T0015118.1 MGP_CBAJ_G0013230.1 mouse_genomes_project 6 51239132 51239665 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0077845.1 MGP_CBAJ_G0030581.1 mouse_genomes_project 6 89774878 89776005 + MGP_CBAJ_P0077845 Pcgf1 protein_coding protein_coding MGP_CBAJ_T0077846.1 MGP_CBAJ_G0030581.1 mouse_genomes_project 6 89775355 89777865 + MGP_CBAJ_P0077846 Pcgf1 protein_coding protein_coding MGP_CBAJ_T0077847.1 MGP_CBAJ_G0030581.1 mouse_genomes_project 6 89775431 89777872 + MGP_CBAJ_P0077847 Pcgf1 protein_coding protein_coding MGP_CBAJ_T0077848.1 MGP_CBAJ_G0030581.1 mouse_genomes_project 6 89775639 89777767 + MGP_CBAJ_P0077848 Pcgf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077849.1 MGP_CBAJ_G0030581.1 mouse_genomes_project 6 89775700 89777767 + MGP_CBAJ_P0077849 Pcgf1 protein_coding protein_coding MGP_CBAJ_T0077850.1 MGP_CBAJ_G0030581.1 mouse_genomes_project 6 89775727 89776720 + Pcgf1 protein_coding retained_intron MGP_CBAJ_T0077851.1 MGP_CBAJ_G0030581.1 mouse_genomes_project 6 89777029 89777864 + Pcgf1 protein_coding retained_intron MGP_CBAJ_T0015285.1 MGP_CBAJ_G0013397.1 mouse_genomes_project 6 107259634 107260110 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0076809.1 MGP_CBAJ_G0030319.1 mouse_genomes_project 6 43536997 43546324 - MGP_CBAJ_P0076809 Fam131b protein_coding protein_coding MGP_CBAJ_T0076810.1 MGP_CBAJ_G0030319.1 mouse_genomes_project 6 43539844 43546153 - MGP_CBAJ_P0076810 Fam131b protein_coding protein_coding MGP_CBAJ_T0101359.1 MGP_CBAJ_G0039437.1 mouse_genomes_project 6 143808036 143824633 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0075861.1 MGP_CBAJ_G0030122.1 mouse_genomes_project 6 5471384 5474608 - MGP_CBAJ_P0075861 Rpa3 protein_coding protein_coding MGP_CBAJ_T0075862.1 MGP_CBAJ_G0030122.1 mouse_genomes_project 6 5472669 5474575 - Rpa3 protein_coding retained_intron MGP_CBAJ_T0015323.1 MGP_CBAJ_G0013435.1 mouse_genomes_project 6 123797324 123797549 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0076106.1 MGP_CBAJ_G0030164.1 mouse_genomes_project 6 22619817 22621056 - MGP_CBAJ_P0076106 Rnf148 protein_coding protein_coding MGP_CBAJ_T0079237.1 MGP_CBAJ_G0030848.1 mouse_genomes_project 6 129144405 129196870 - MGP_CBAJ_P0079237 Bms1 protein_coding protein_coding MGP_CBAJ_T0079238.1 MGP_CBAJ_G0030848.1 mouse_genomes_project 6 129166745 129196800 - Bms1 protein_coding retained_intron MGP_CBAJ_T0079239.1 MGP_CBAJ_G0030848.1 mouse_genomes_project 6 129191229 129196808 - Bms1 protein_coding processed_transcript MGP_CBAJ_T0078308.1 MGP_CBAJ_G0030668.1 mouse_genomes_project 6 95317146 95371824 - MGP_CBAJ_P0078308 Rab7 protein_coding protein_coding MGP_CBAJ_T0078309.1 MGP_CBAJ_G0030668.1 mouse_genomes_project 6 95317146 95371571 - MGP_CBAJ_P0078309 Rab7 protein_coding protein_coding MGP_CBAJ_T0078310.1 MGP_CBAJ_G0030668.1 mouse_genomes_project 6 95317297 95342265 - MGP_CBAJ_P0078310 Rab7 protein_coding protein_coding MGP_CBAJ_T0078311.1 MGP_CBAJ_G0030668.1 mouse_genomes_project 6 95317794 95342265 - MGP_CBAJ_P0078311 Rab7 protein_coding protein_coding MGP_CBAJ_T0078312.1 MGP_CBAJ_G0030668.1 mouse_genomes_project 6 95318223 95371752 - MGP_CBAJ_P0078312 Rab7 protein_coding protein_coding MGP_CBAJ_T0078313.1 MGP_CBAJ_G0030668.1 mouse_genomes_project 6 95322955 95371785 - MGP_CBAJ_P0078313 Rab7 protein_coding protein_coding MGP_CBAJ_T0079748.1 MGP_CBAJ_G0030945.1 mouse_genomes_project 6 136796487 136804232 + MGP_CBAJ_P0079748 Acrbp protein_coding protein_coding MGP_CBAJ_T0079749.1 MGP_CBAJ_G0030945.1 mouse_genomes_project 6 136796746 136798296 + MGP_CBAJ_P0079749 Acrbp protein_coding protein_coding MGP_CBAJ_T0079750.1 MGP_CBAJ_G0030945.1 mouse_genomes_project 6 136796758 136818021 + MGP_CBAJ_P0079750 Acrbp protein_coding protein_coding MGP_CBAJ_T0079751.1 MGP_CBAJ_G0030945.1 mouse_genomes_project 6 136796766 136798348 + MGP_CBAJ_P0079751 Acrbp protein_coding protein_coding MGP_CBAJ_T0079752.1 MGP_CBAJ_G0030945.1 mouse_genomes_project 6 136798654 136804231 + Acrbp protein_coding processed_transcript MGP_CBAJ_T0079753.1 MGP_CBAJ_G0030945.1 mouse_genomes_project 6 136803839 136805246 + Acrbp protein_coding retained_intron MGP_CBAJ_T0079754.1 MGP_CBAJ_G0030945.1 mouse_genomes_project 6 136816942 136817996 + Acrbp protein_coding retained_intron MGP_CBAJ_T0002083.1 MGP_CBAJ_G0001999.1 mouse_genomes_project 6 123511580 123512630 - TEC TEC MGP_CBAJ_T0015237.1 MGP_CBAJ_G0013349.1 mouse_genomes_project 6 88414704 88415395 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000294.1 MGP_CBAJ_G0000239.1 mouse_genomes_project 6 74756947 74757397 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0079977.1 MGP_CBAJ_G0030994.1 mouse_genomes_project 6 140935852 141250088 - MGP_CBAJ_P0079977 protein_coding protein_coding MGP_CBAJ_T0079986.1 MGP_CBAJ_G0030994.1 mouse_genomes_project 6 141153275 141250025 - MGP_CBAJ_P0079986 protein_coding protein_coding MGP_CBAJ_T0078718.1 MGP_CBAJ_G0030752.1 mouse_genomes_project 6 109223364 109340645 - MGP_CBAJ_P0078718 Shq1 protein_coding protein_coding MGP_CBAJ_T0078719.1 MGP_CBAJ_G0030752.1 mouse_genomes_project 6 109230158 109340645 - MGP_CBAJ_P0078719 Shq1 protein_coding protein_coding MGP_CBAJ_T0078720.1 MGP_CBAJ_G0030752.1 mouse_genomes_project 6 109230159 109340627 - MGP_CBAJ_P0078720 Shq1 protein_coding protein_coding MGP_CBAJ_T0078721.1 MGP_CBAJ_G0030752.1 mouse_genomes_project 6 109332304 109340621 - Shq1 protein_coding processed_transcript MGP_CBAJ_T0077576.1 MGP_CBAJ_G0030529.1 mouse_genomes_project 6 76928825 76980369 - MGP_CBAJ_P0077576 Kdm3a protein_coding protein_coding MGP_CBAJ_T0077577.1 MGP_CBAJ_G0030529.1 mouse_genomes_project 6 76928827 76980150 - MGP_CBAJ_P0077577 Kdm3a protein_coding protein_coding MGP_CBAJ_T0077578.1 MGP_CBAJ_G0030529.1 mouse_genomes_project 6 76928890 76980454 - MGP_CBAJ_P0077578 Kdm3a protein_coding protein_coding MGP_CBAJ_T0077579.1 MGP_CBAJ_G0030529.1 mouse_genomes_project 6 76929981 76931798 - Kdm3a protein_coding retained_intron MGP_CBAJ_T0077580.1 MGP_CBAJ_G0030529.1 mouse_genomes_project 6 76930410 76932437 - Kdm3a protein_coding retained_intron MGP_CBAJ_T0077581.1 MGP_CBAJ_G0030529.1 mouse_genomes_project 6 76933830 76937028 - Kdm3a protein_coding retained_intron MGP_CBAJ_T0077582.1 MGP_CBAJ_G0030529.1 mouse_genomes_project 6 76934475 76954469 - Kdm3a protein_coding processed_transcript MGP_CBAJ_T0077583.1 MGP_CBAJ_G0030529.1 mouse_genomes_project 6 76936817 76939266 - Kdm3a protein_coding retained_intron MGP_CBAJ_T0077584.1 MGP_CBAJ_G0030529.1 mouse_genomes_project 6 76939172 76980150 - MGP_CBAJ_P0077584 Kdm3a protein_coding protein_coding MGP_CBAJ_T0077585.1 MGP_CBAJ_G0030529.1 mouse_genomes_project 6 76939273 76941002 - Kdm3a protein_coding retained_intron MGP_CBAJ_T0077586.1 MGP_CBAJ_G0030529.1 mouse_genomes_project 6 76940569 76959449 - MGP_CBAJ_P0077586 Kdm3a protein_coding nonsense_mediated_decay MGP_CBAJ_T0077587.1 MGP_CBAJ_G0030529.1 mouse_genomes_project 6 76942588 76969113 - Kdm3a protein_coding retained_intron MGP_CBAJ_T0077588.1 MGP_CBAJ_G0030529.1 mouse_genomes_project 6 76942977 76943826 - Kdm3a protein_coding processed_transcript MGP_CBAJ_T0077589.1 MGP_CBAJ_G0030529.1 mouse_genomes_project 6 76959190 76968836 - Kdm3a protein_coding processed_transcript MGP_CBAJ_T0011498.1 MGP_CBAJ_G0009636.1 mouse_genomes_project 6 15920497 15920681 + Gm27960 misc_RNA misc_RNA MGP_CBAJ_T0078733.1 MGP_CBAJ_G0030757.1 mouse_genomes_project 6 112534059 112756916 + MGP_CBAJ_P0078733 Chl1 protein_coding protein_coding MGP_CBAJ_T0078734.1 MGP_CBAJ_G0030757.1 mouse_genomes_project 6 112534435 112661241 + Chl1 protein_coding retained_intron MGP_CBAJ_T0078735.1 MGP_CBAJ_G0030757.1 mouse_genomes_project 6 112534541 112740617 + MGP_CBAJ_P0078735 Chl1 protein_coding protein_coding MGP_CBAJ_T0078736.1 MGP_CBAJ_G0030757.1 mouse_genomes_project 6 112534647 112737026 + MGP_CBAJ_P0078736 Chl1 protein_coding protein_coding MGP_CBAJ_T0078737.1 MGP_CBAJ_G0030757.1 mouse_genomes_project 6 112534803 112680692 + MGP_CBAJ_P0078737 Chl1 protein_coding protein_coding MGP_CBAJ_T0078738.1 MGP_CBAJ_G0030757.1 mouse_genomes_project 6 112712358 112737383 + MGP_CBAJ_P0078738 Chl1 protein_coding protein_coding MGP_CBAJ_T0015136.1 MGP_CBAJ_G0013248.1 mouse_genomes_project 6 60869371 60869624 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0078813.1 MGP_CBAJ_G0030774.1 mouse_genomes_project 6 122568490 122584691 - MGP_CBAJ_P0078813 Oxtr protein_coding protein_coding MGP_CBAJ_T0078814.1 MGP_CBAJ_G0030774.1 mouse_genomes_project 6 122568494 122583142 - MGP_CBAJ_P0078814 Oxtr protein_coding protein_coding MGP_CBAJ_T0078593.1 MGP_CBAJ_G0030729.1 mouse_genomes_project 6 101490474 102163425 - MGP_CBAJ_P0078593 Magi1 protein_coding protein_coding MGP_CBAJ_T0078594.1 MGP_CBAJ_G0030729.1 mouse_genomes_project 6 101490474 102162909 - MGP_CBAJ_P0078594 Magi1 protein_coding protein_coding MGP_CBAJ_T0078595.1 MGP_CBAJ_G0030729.1 mouse_genomes_project 6 101490474 102162909 - MGP_CBAJ_P0078595 Magi1 protein_coding protein_coding MGP_CBAJ_T0078596.1 MGP_CBAJ_G0030729.1 mouse_genomes_project 6 101493209 101759765 - MGP_CBAJ_P0078596 Magi1 protein_coding protein_coding MGP_CBAJ_T0078597.1 MGP_CBAJ_G0030729.1 mouse_genomes_project 6 101493528 101792586 - MGP_CBAJ_P0078597 Magi1 protein_coding protein_coding MGP_CBAJ_T0078598.1 MGP_CBAJ_G0030729.1 mouse_genomes_project 6 101496813 101759629 - MGP_CBAJ_P0078598 Magi1 protein_coding protein_coding MGP_CBAJ_T0078599.1 MGP_CBAJ_G0030729.1 mouse_genomes_project 6 101497410 101759039 - MGP_CBAJ_P0078599 Magi1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078600.1 MGP_CBAJ_G0030729.1 mouse_genomes_project 6 101498353 102163403 - MGP_CBAJ_P0078600 Magi1 protein_coding protein_coding MGP_CBAJ_T0078601.1 MGP_CBAJ_G0030729.1 mouse_genomes_project 6 101602700 101758581 - MGP_CBAJ_P0078601 Magi1 protein_coding protein_coding MGP_CBAJ_T0078602.1 MGP_CBAJ_G0030729.1 mouse_genomes_project 6 101614261 101621511 - MGP_CBAJ_P0078602 Magi1 protein_coding protein_coding MGP_CBAJ_T0078603.1 MGP_CBAJ_G0030729.1 mouse_genomes_project 6 102005460 102162533 - Magi1 protein_coding processed_transcript MGP_CBAJ_T0102039.1 MGP_CBAJ_G0040069.1 mouse_genomes_project 6 146097471 146098373 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0100665.1 MGP_CBAJ_G0038920.1 mouse_genomes_project 6 55284871 55284993 - Gm24355 snoRNA snoRNA MGP_CBAJ_T0008497.1 MGP_CBAJ_G0006861.1 mouse_genomes_project 6 54654242 54666333 + Halr1 lincRNA lincRNA MGP_CBAJ_T0008498.1 MGP_CBAJ_G0006861.1 mouse_genomes_project 6 54654287 54667545 + Halr1 lincRNA lincRNA MGP_CBAJ_T0008499.1 MGP_CBAJ_G0006861.1 mouse_genomes_project 6 54654296 54665994 + Halr1 lincRNA lincRNA MGP_CBAJ_T0078651.1 MGP_CBAJ_G0030741.1 mouse_genomes_project 6 105427240 105457112 + MGP_CBAJ_P0078651 Arl6ip5 protein_coding protein_coding MGP_CBAJ_T0077156.1 MGP_CBAJ_G0030410.1 mouse_genomes_project 6 54751983 54755338 + MGP_CBAJ_P0077156 5730596B20Rik protein_coding protein_coding MGP_CBAJ_T0010627.1 MGP_CBAJ_G0008765.1 mouse_genomes_project 6 29017182 29017271 + Gm26220 miRNA miRNA MGP_CBAJ_T0075939.1 MGP_CBAJ_G0030138.1 mouse_genomes_project 6 12825638 13411784 + MGP_CBAJ_P0075939 Foxp2 protein_coding protein_coding MGP_CBAJ_T0075940.1 MGP_CBAJ_G0030138.1 mouse_genomes_project 6 12825677 13379972 + Foxp2 protein_coding retained_intron MGP_CBAJ_T0075941.1 MGP_CBAJ_G0030138.1 mouse_genomes_project 6 12825740 12911620 + Foxp2 protein_coding processed_transcript MGP_CBAJ_T0075942.1 MGP_CBAJ_G0030138.1 mouse_genomes_project 6 12825766 13245853 + MGP_CBAJ_P0075942 Foxp2 protein_coding protein_coding MGP_CBAJ_T0075943.1 MGP_CBAJ_G0030138.1 mouse_genomes_project 6 12825767 13246835 + Foxp2 protein_coding retained_intron MGP_CBAJ_T0075944.1 MGP_CBAJ_G0030138.1 mouse_genomes_project 6 12828150 13145960 + Foxp2 protein_coding processed_transcript MGP_CBAJ_T0075945.1 MGP_CBAJ_G0030138.1 mouse_genomes_project 6 13131631 13148345 + MGP_CBAJ_P0075945 Foxp2 protein_coding protein_coding MGP_CBAJ_T0075946.1 MGP_CBAJ_G0030138.1 mouse_genomes_project 6 13132437 13408115 + MGP_CBAJ_P0075946 Foxp2 protein_coding protein_coding MGP_CBAJ_T0075947.1 MGP_CBAJ_G0030138.1 mouse_genomes_project 6 13132437 13411008 + MGP_CBAJ_P0075947 Foxp2 protein_coding protein_coding MGP_CBAJ_T0075948.1 MGP_CBAJ_G0030138.1 mouse_genomes_project 6 13132437 13407834 + MGP_CBAJ_P0075948 Foxp2 protein_coding protein_coding MGP_CBAJ_T0075949.1 MGP_CBAJ_G0030138.1 mouse_genomes_project 6 13132494 13362869 + MGP_CBAJ_P0075949 Foxp2 protein_coding protein_coding MGP_CBAJ_T0075950.1 MGP_CBAJ_G0030138.1 mouse_genomes_project 6 13145949 13365897 + Foxp2 protein_coding retained_intron MGP_CBAJ_T0075951.1 MGP_CBAJ_G0030138.1 mouse_genomes_project 6 13145951 13344037 + MGP_CBAJ_P0075951 Foxp2 protein_coding protein_coding MGP_CBAJ_T0075952.1 MGP_CBAJ_G0030138.1 mouse_genomes_project 6 13145951 13373709 + MGP_CBAJ_P0075952 Foxp2 protein_coding protein_coding MGP_CBAJ_T0075953.1 MGP_CBAJ_G0030138.1 mouse_genomes_project 6 13145964 13373709 + MGP_CBAJ_P0075953 Foxp2 protein_coding protein_coding MGP_CBAJ_T0075954.1 MGP_CBAJ_G0030138.1 mouse_genomes_project 6 13211080 13245853 + Foxp2 protein_coding processed_transcript MGP_CBAJ_T0075955.1 MGP_CBAJ_G0030138.1 mouse_genomes_project 6 13284676 13285854 + Foxp2 protein_coding retained_intron MGP_CBAJ_T0075956.1 MGP_CBAJ_G0030138.1 mouse_genomes_project 6 13340906 13342306 + Foxp2 protein_coding processed_transcript MGP_CBAJ_T0075957.1 MGP_CBAJ_G0030138.1 mouse_genomes_project 6 13340906 13408859 + MGP_CBAJ_P0075957 Foxp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0015127.1 MGP_CBAJ_G0013239.1 mouse_genomes_project 6 53391313 53391551 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015233.1 MGP_CBAJ_G0013345.1 mouse_genomes_project 6 84641708 84642204 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0076403.1 MGP_CBAJ_G0030222.1 mouse_genomes_project 6 31310041 31438137 + MGP_CBAJ_P0076403 Mkln1 protein_coding protein_coding MGP_CBAJ_T0076404.1 MGP_CBAJ_G0030222.1 mouse_genomes_project 6 31310134 31389715 + Mkln1 protein_coding retained_intron MGP_CBAJ_T0076405.1 MGP_CBAJ_G0030222.1 mouse_genomes_project 6 31310135 31349648 + Mkln1 protein_coding retained_intron MGP_CBAJ_T0076406.1 MGP_CBAJ_G0030222.1 mouse_genomes_project 6 31310142 31330723 + Mkln1 protein_coding retained_intron MGP_CBAJ_T0076407.1 MGP_CBAJ_G0030222.1 mouse_genomes_project 6 31310151 31342204 + Mkln1 protein_coding retained_intron MGP_CBAJ_T0076408.1 MGP_CBAJ_G0030222.1 mouse_genomes_project 6 31310151 31315779 + Mkln1 protein_coding retained_intron MGP_CBAJ_T0076409.1 MGP_CBAJ_G0030222.1 mouse_genomes_project 6 31310165 31346762 + Mkln1 protein_coding processed_transcript MGP_CBAJ_T0076410.1 MGP_CBAJ_G0030222.1 mouse_genomes_project 6 31342018 31410062 + Mkln1 protein_coding processed_transcript MGP_CBAJ_T0076411.1 MGP_CBAJ_G0030222.1 mouse_genomes_project 6 31342052 31393194 + Mkln1 protein_coding processed_transcript MGP_CBAJ_T0076412.1 MGP_CBAJ_G0030222.1 mouse_genomes_project 6 31386945 31413344 + Mkln1 protein_coding retained_intron MGP_CBAJ_T0076413.1 MGP_CBAJ_G0030222.1 mouse_genomes_project 6 31397520 31401132 + Mkln1 protein_coding retained_intron MGP_CBAJ_T0076414.1 MGP_CBAJ_G0030222.1 mouse_genomes_project 6 31410044 31429295 + MGP_CBAJ_P0076414 Mkln1 protein_coding protein_coding MGP_CBAJ_T0076415.1 MGP_CBAJ_G0030222.1 mouse_genomes_project 6 31413271 31429174 + Mkln1 protein_coding retained_intron MGP_CBAJ_T0001977.1 MGP_CBAJ_G0001893.1 mouse_genomes_project 6 78219103 78220392 + TEC TEC MGP_CBAJ_T0076967.1 MGP_CBAJ_G0030365.1 mouse_genomes_project 6 50630941 50653550 + MGP_CBAJ_P0076967 Lrrc61 protein_coding protein_coding MGP_CBAJ_T0076968.1 MGP_CBAJ_G0030365.1 mouse_genomes_project 6 50630944 50651200 + MGP_CBAJ_P0076968 Lrrc61 protein_coding protein_coding MGP_CBAJ_T0076969.1 MGP_CBAJ_G0030365.1 mouse_genomes_project 6 50630944 50651220 + MGP_CBAJ_P0076969 Lrrc61 protein_coding protein_coding MGP_CBAJ_T0076970.1 MGP_CBAJ_G0030365.1 mouse_genomes_project 6 50630950 50653549 + MGP_CBAJ_P0076970 Lrrc61 protein_coding protein_coding MGP_CBAJ_T0076971.1 MGP_CBAJ_G0030365.1 mouse_genomes_project 6 50630956 50651095 + Lrrc61 protein_coding processed_transcript MGP_CBAJ_T0076972.1 MGP_CBAJ_G0030365.1 mouse_genomes_project 6 50630974 50651403 + MGP_CBAJ_P0076972 Lrrc61 protein_coding protein_coding MGP_CBAJ_T0099456.1 MGP_CBAJ_G0037711.1 mouse_genomes_project 6 131436718 131436824 - Gm24592 snRNA snRNA MGP_CBAJ_T0080088.1 MGP_CBAJ_G0031032.1 mouse_genomes_project 6 144174915 144190126 - MGP_CBAJ_P0080088 Styk1 protein_coding protein_coding MGP_CBAJ_T0080089.1 MGP_CBAJ_G0031032.1 mouse_genomes_project 6 144175903 144192665 - MGP_CBAJ_P0080089 Styk1 protein_coding protein_coding MGP_CBAJ_T0080090.1 MGP_CBAJ_G0031032.1 mouse_genomes_project 6 144187475 144235254 - Styk1 protein_coding processed_transcript MGP_CBAJ_T0080091.1 MGP_CBAJ_G0031032.1 mouse_genomes_project 6 144219914 144235251 - Styk1 protein_coding processed_transcript MGP_CBAJ_T0080092.1 MGP_CBAJ_G0031032.1 mouse_genomes_project 6 144233627 144235254 - Styk1 protein_coding retained_intron MGP_CBAJ_T0078468.1 MGP_CBAJ_G0030705.1 mouse_genomes_project 6 97971925 98055788 + Aldh1l1 protein_coding processed_transcript MGP_CBAJ_T0078469.1 MGP_CBAJ_G0030705.1 mouse_genomes_project 6 98046930 98098936 + MGP_CBAJ_P0078469 Aldh1l1 protein_coding protein_coding MGP_CBAJ_T0078470.1 MGP_CBAJ_G0030705.1 mouse_genomes_project 6 98046946 98097902 + MGP_CBAJ_P0078470 Aldh1l1 protein_coding protein_coding MGP_CBAJ_T0078471.1 MGP_CBAJ_G0030705.1 mouse_genomes_project 6 98046984 98056363 + MGP_CBAJ_P0078471 Aldh1l1 protein_coding protein_coding MGP_CBAJ_T0078472.1 MGP_CBAJ_G0030705.1 mouse_genomes_project 6 98046989 98097893 + MGP_CBAJ_P0078472 Aldh1l1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078473.1 MGP_CBAJ_G0030705.1 mouse_genomes_project 6 98064104 98067283 + Aldh1l1 protein_coding processed_transcript MGP_CBAJ_T0078474.1 MGP_CBAJ_G0030705.1 mouse_genomes_project 6 98088081 98095806 + Aldh1l1 protein_coding retained_intron MGP_CBAJ_T0015021.1 MGP_CBAJ_G0013133.1 mouse_genomes_project 6 5845354 5846601 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0080196.1 MGP_CBAJ_G0031077.1 mouse_genomes_project 6 148556947 148568949 - MGP_CBAJ_P0080196 Gprc5d protein_coding protein_coding MGP_CBAJ_T0080197.1 MGP_CBAJ_G0031077.1 mouse_genomes_project 6 148556947 148568912 - MGP_CBAJ_P0080197 Gprc5d protein_coding protein_coding MGP_CBAJ_T0076125.1 MGP_CBAJ_G0030172.1 mouse_genomes_project 6 23779605 23793055 + MGP_CBAJ_P0076125 Hyal6 protein_coding protein_coding MGP_CBAJ_T0015128.1 MGP_CBAJ_G0013240.1 mouse_genomes_project 6 54672087 54672741 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0077808.1 MGP_CBAJ_G0030576.1 mouse_genomes_project 6 89729642 89733025 + Loxl3 protein_coding processed_transcript MGP_CBAJ_T0077809.1 MGP_CBAJ_G0030576.1 mouse_genomes_project 6 89729642 89747885 + MGP_CBAJ_P0077809 Loxl3 protein_coding protein_coding MGP_CBAJ_T0077810.1 MGP_CBAJ_G0030576.1 mouse_genomes_project 6 89729642 89747885 + MGP_CBAJ_P0077810 Loxl3 protein_coding protein_coding MGP_CBAJ_T0077811.1 MGP_CBAJ_G0030576.1 mouse_genomes_project 6 89733869 89740558 + Loxl3 protein_coding processed_transcript MGP_CBAJ_T0077812.1 MGP_CBAJ_G0030576.1 mouse_genomes_project 6 89745190 89745990 + Loxl3 protein_coding retained_intron MGP_CBAJ_T0077742.1 MGP_CBAJ_G0030558.1 mouse_genomes_project 6 83295249 83310213 + MGP_CBAJ_P0077742 Lrrtm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077743.1 MGP_CBAJ_G0030558.1 mouse_genomes_project 6 83295257 83298079 + MGP_CBAJ_P0077743 Lrrtm1 protein_coding protein_coding MGP_CBAJ_T0077744.1 MGP_CBAJ_G0030558.1 mouse_genomes_project 6 83295278 83298073 + MGP_CBAJ_P0077744 Lrrtm1 protein_coding protein_coding MGP_CBAJ_T0077745.1 MGP_CBAJ_G0030558.1 mouse_genomes_project 6 83295482 83296674 + MGP_CBAJ_P0077745 Lrrtm1 protein_coding protein_coding MGP_CBAJ_T0015378.1 MGP_CBAJ_G0013490.1 mouse_genomes_project 6 139498577 139501986 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0077024.1 MGP_CBAJ_G0030380.1 mouse_genomes_project 6 50846910 50856506 + MGP_CBAJ_P0077024 Gimap5 protein_coding protein_coding MGP_CBAJ_T0077025.1 MGP_CBAJ_G0030380.1 mouse_genomes_project 6 50846911 50848206 + Gimap5 protein_coding processed_transcript MGP_CBAJ_T0077026.1 MGP_CBAJ_G0030380.1 mouse_genomes_project 6 50846912 50848233 + Gimap5 protein_coding processed_transcript MGP_CBAJ_T0077027.1 MGP_CBAJ_G0030380.1 mouse_genomes_project 6 50847012 50849347 + Gimap5 protein_coding retained_intron MGP_CBAJ_T0015402.1 MGP_CBAJ_G0013514.1 mouse_genomes_project 6 145402831 145403048 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0077890.1 MGP_CBAJ_G0030591.1 mouse_genomes_project 6 89864060 89875474 + MGP_CBAJ_P0077890 1700003E16Rik protein_coding protein_coding MGP_CBAJ_T0077891.1 MGP_CBAJ_G0030591.1 mouse_genomes_project 6 89864157 89875420 + MGP_CBAJ_P0077891 1700003E16Rik protein_coding protein_coding MGP_CBAJ_T0015274.1 MGP_CBAJ_G0013386.1 mouse_genomes_project 6 102340176 102340592 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099426.1 MGP_CBAJ_G0037681.1 mouse_genomes_project 6 42837068 42837130 - Gm27549 snRNA snRNA MGP_CBAJ_T0099420.1 MGP_CBAJ_G0037675.1 mouse_genomes_project 6 29126230 29126336 - Gm26484 snRNA snRNA MGP_CBAJ_T0075912.1 MGP_CBAJ_G0030131.1 mouse_genomes_project 6 10762255 10768494 + MGP_CBAJ_P0075912 Tmem106b protein_coding protein_coding MGP_CBAJ_T0075913.1 MGP_CBAJ_G0030131.1 mouse_genomes_project 6 10762312 10764450 + MGP_CBAJ_P0075913 Tmem106b protein_coding protein_coding MGP_CBAJ_T0075914.1 MGP_CBAJ_G0030131.1 mouse_genomes_project 6 10762335 10782497 + MGP_CBAJ_P0075914 Tmem106b protein_coding protein_coding MGP_CBAJ_T0075915.1 MGP_CBAJ_G0030131.1 mouse_genomes_project 6 10762347 10768785 + Tmem106b protein_coding retained_intron MGP_CBAJ_T0075916.1 MGP_CBAJ_G0030131.1 mouse_genomes_project 6 10762350 10769770 + Tmem106b protein_coding processed_transcript MGP_CBAJ_T0075917.1 MGP_CBAJ_G0030131.1 mouse_genomes_project 6 10762747 10775055 + MGP_CBAJ_P0075917 Tmem106b protein_coding protein_coding MGP_CBAJ_T0015080.1 MGP_CBAJ_G0013192.1 mouse_genomes_project 6 39040397 39041039 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0079767.1 MGP_CBAJ_G0030948.1 mouse_genomes_project 6 136900689 136916439 + MGP_CBAJ_P0079767 Nop2 protein_coding protein_coding MGP_CBAJ_T0079768.1 MGP_CBAJ_G0030948.1 mouse_genomes_project 6 136900827 136903497 + MGP_CBAJ_P0079768 Nop2 protein_coding protein_coding MGP_CBAJ_T0002116.1 MGP_CBAJ_G0002031.1 mouse_genomes_project 6 142292259 142292644 - TEC TEC MGP_CBAJ_T0102017.1 MGP_CBAJ_G0040048.1 mouse_genomes_project 6 97713279 97714222 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0079783.1 MGP_CBAJ_G0030951.1 mouse_genomes_project 6 136940658 136941941 - Ncapd2 protein_coding retained_intron MGP_CBAJ_T0079784.1 MGP_CBAJ_G0030951.1 mouse_genomes_project 6 136940658 136966926 - MGP_CBAJ_P0079784 Ncapd2 protein_coding protein_coding MGP_CBAJ_T0079785.1 MGP_CBAJ_G0030951.1 mouse_genomes_project 6 136942495 136943753 - Ncapd2 protein_coding retained_intron MGP_CBAJ_T0079786.1 MGP_CBAJ_G0030951.1 mouse_genomes_project 6 136943603 136944469 - Ncapd2 protein_coding retained_intron MGP_CBAJ_T0079787.1 MGP_CBAJ_G0030951.1 mouse_genomes_project 6 136943714 136946578 - Ncapd2 protein_coding retained_intron MGP_CBAJ_T0079788.1 MGP_CBAJ_G0030951.1 mouse_genomes_project 6 136944494 136946560 - Ncapd2 protein_coding retained_intron MGP_CBAJ_T0079789.1 MGP_CBAJ_G0030951.1 mouse_genomes_project 6 136946024 136947199 - Ncapd2 protein_coding retained_intron MGP_CBAJ_T0079790.1 MGP_CBAJ_G0030951.1 mouse_genomes_project 6 136946119 136952100 - Ncapd2 protein_coding retained_intron MGP_CBAJ_T0079791.1 MGP_CBAJ_G0030951.1 mouse_genomes_project 6 136951213 136952752 - Ncapd2 protein_coding retained_intron MGP_CBAJ_T0079792.1 MGP_CBAJ_G0030951.1 mouse_genomes_project 6 136952575 136954807 - Ncapd2 protein_coding retained_intron MGP_CBAJ_T0079793.1 MGP_CBAJ_G0030951.1 mouse_genomes_project 6 136959525 136966828 - MGP_CBAJ_P0079793 Ncapd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079794.1 MGP_CBAJ_G0030951.1 mouse_genomes_project 6 136959749 136961825 - Ncapd2 protein_coding retained_intron MGP_CBAJ_T0079795.1 MGP_CBAJ_G0030951.1 mouse_genomes_project 6 136961022 136966715 - MGP_CBAJ_P0079795 Ncapd2 protein_coding protein_coding MGP_CBAJ_T0102009.1 MGP_CBAJ_G0040040.1 mouse_genomes_project 6 93316222 93317265 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0076888.1 MGP_CBAJ_G0030351.1 mouse_genomes_project 6 49360507 49412221 + MGP_CBAJ_P0076888 Cul1 protein_coding protein_coding MGP_CBAJ_T0076889.1 MGP_CBAJ_G0030351.1 mouse_genomes_project 6 49360601 49398895 + MGP_CBAJ_P0076889 Cul1 protein_coding protein_coding MGP_CBAJ_T0076890.1 MGP_CBAJ_G0030351.1 mouse_genomes_project 6 49361013 49440717 + MGP_CBAJ_P0076890 Cul1 protein_coding protein_coding MGP_CBAJ_T0076891.1 MGP_CBAJ_G0030351.1 mouse_genomes_project 6 49361429 49443090 + MGP_CBAJ_P0076891 Cul1 protein_coding protein_coding MGP_CBAJ_T0076892.1 MGP_CBAJ_G0030351.1 mouse_genomes_project 6 49361497 49399107 + MGP_CBAJ_P0076892 Cul1 protein_coding protein_coding MGP_CBAJ_T0076893.1 MGP_CBAJ_G0030351.1 mouse_genomes_project 6 49431788 49443009 + Cul1 protein_coding processed_transcript MGP_CBAJ_T0076894.1 MGP_CBAJ_G0030351.1 mouse_genomes_project 6 49433972 49436752 + Cul1 protein_coding retained_intron MGP_CBAJ_T0076895.1 MGP_CBAJ_G0030351.1 mouse_genomes_project 6 49436668 49440232 + Cul1 protein_coding retained_intron MGP_CBAJ_T0076896.1 MGP_CBAJ_G0030351.1 mouse_genomes_project 6 49440514 49442730 + Cul1 protein_coding processed_transcript MGP_CBAJ_T0075921.1 MGP_CBAJ_G0030133.1 mouse_genomes_project 6 11340347 11370284 - MGP_CBAJ_P0075921 Tmem168 protein_coding protein_coding MGP_CBAJ_T0075922.1 MGP_CBAJ_G0030133.1 mouse_genomes_project 6 11342447 11370138 - MGP_CBAJ_P0075922 Tmem168 protein_coding protein_coding MGP_CBAJ_T0075923.1 MGP_CBAJ_G0030133.1 mouse_genomes_project 6 11365561 11369932 - Tmem168 protein_coding processed_transcript MGP_CBAJ_T0075924.1 MGP_CBAJ_G0030133.1 mouse_genomes_project 6 11365577 11370189 - Tmem168 protein_coding processed_transcript MGP_CBAJ_T0075925.1 MGP_CBAJ_G0030133.1 mouse_genomes_project 6 11368120 11370228 - Tmem168 protein_coding processed_transcript MGP_CBAJ_T0075926.1 MGP_CBAJ_G0030133.1 mouse_genomes_project 6 11368781 11370203 - Tmem168 protein_coding processed_transcript MGP_CBAJ_T0075927.1 MGP_CBAJ_G0030133.1 mouse_genomes_project 6 11369470 11370211 - Tmem168 protein_coding processed_transcript MGP_CBAJ_T0000268.1 MGP_CBAJ_G0000213.1 mouse_genomes_project 6 72924849 72925582 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0002102.1 MGP_CBAJ_G0002017.1 mouse_genomes_project 6 136840785 136841378 + TEC TEC MGP_CBAJ_T0000278.1 MGP_CBAJ_G0000223.1 mouse_genomes_project 6 73415348 73416073 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0078254.1 MGP_CBAJ_G0030658.1 mouse_genomes_project 6 94902816 94954281 - MGP_CBAJ_P0078254 Aplf protein_coding protein_coding MGP_CBAJ_T0078255.1 MGP_CBAJ_G0030658.1 mouse_genomes_project 6 94905692 94954198 - MGP_CBAJ_P0078255 Aplf protein_coding nonsense_mediated_decay MGP_CBAJ_T0078256.1 MGP_CBAJ_G0030658.1 mouse_genomes_project 6 94905697 94954327 - MGP_CBAJ_P0078256 Aplf protein_coding protein_coding MGP_CBAJ_T0078257.1 MGP_CBAJ_G0030658.1 mouse_genomes_project 6 94927070 94954263 - Aplf protein_coding retained_intron MGP_CBAJ_T0015050.1 MGP_CBAJ_G0013162.1 mouse_genomes_project 6 18263198 18264164 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008398.1 MGP_CBAJ_G0006794.1 mouse_genomes_project 6 4101969 4105567 - Gm26774 lincRNA lincRNA MGP_CBAJ_T0015094.1 MGP_CBAJ_G0013206.1 mouse_genomes_project 6 43995599 43995765 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0077559.1 MGP_CBAJ_G0030524.1 mouse_genomes_project 6 76609242 76623949 + MGP_CBAJ_P0077559 Cd8b1 protein_coding protein_coding MGP_CBAJ_T0001931.1 MGP_CBAJ_G0001847.1 mouse_genomes_project 6 46905548 46906107 + TEC TEC MGP_CBAJ_T0004962.1 MGP_CBAJ_G0004233.1 mouse_genomes_project 6 108250898 108257600 + Gm26748 antisense antisense MGP_CBAJ_T0079184.1 MGP_CBAJ_G0030836.1 mouse_genomes_project 6 127112262 127115331 + MGP_CBAJ_P0079184 Olfr214 protein_coding protein_coding MGP_CBAJ_T0079185.1 MGP_CBAJ_G0030836.1 mouse_genomes_project 6 127114323 127115331 + MGP_CBAJ_P0079185 Olfr214 protein_coding protein_coding MGP_CBAJ_T0008648.1 MGP_CBAJ_G0006978.1 mouse_genomes_project 6 148789336 148799529 - Gm44275 lincRNA lincRNA MGP_CBAJ_T0078587.1 MGP_CBAJ_G0030727.1 mouse_genomes_project 6 100530411 100557223 + MGP_CBAJ_P0078587 A730049H05Rik protein_coding protein_coding MGP_CBAJ_T0078588.1 MGP_CBAJ_G0030727.1 mouse_genomes_project 6 100541547 100560900 + A730049H05Rik protein_coding processed_transcript MGP_CBAJ_T0000292.1 MGP_CBAJ_G0000237.1 mouse_genomes_project 6 74617746 74618141 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0008548.1 MGP_CBAJ_G0006901.1 mouse_genomes_project 6 93157957 93162924 + 4930553P18Rik lincRNA lincRNA MGP_CBAJ_T0080594.1 MGP_CBAJ_G0031153.1 mouse_genomes_project 6 161668008 161675832 + Med21 protein_coding processed_transcript MGP_CBAJ_T0080595.1 MGP_CBAJ_G0031153.1 mouse_genomes_project 6 161668008 161675832 + MGP_CBAJ_P0080595 Med21 protein_coding protein_coding MGP_CBAJ_T0080596.1 MGP_CBAJ_G0031153.1 mouse_genomes_project 6 161668040 161669438 + Med21 protein_coding retained_intron MGP_CBAJ_T0080597.1 MGP_CBAJ_G0031153.1 mouse_genomes_project 6 161668041 161674770 + MGP_CBAJ_P0080597 Med21 protein_coding protein_coding MGP_CBAJ_T0080598.1 MGP_CBAJ_G0031153.1 mouse_genomes_project 6 161668042 161675832 + Med21 protein_coding processed_transcript MGP_CBAJ_T0080599.1 MGP_CBAJ_G0031153.1 mouse_genomes_project 6 161668052 161675962 + MGP_CBAJ_P0080599 Med21 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080600.1 MGP_CBAJ_G0031153.1 mouse_genomes_project 6 161672645 161675832 + Med21 protein_coding retained_intron MGP_CBAJ_T0079458.1 MGP_CBAJ_G0030883.1 mouse_genomes_project 6 133103214 133187517 + MGP_CBAJ_P0079458 Mug1 protein_coding protein_coding MGP_CBAJ_T0079459.1 MGP_CBAJ_G0030883.1 mouse_genomes_project 6 133115002 133250187 + Mug1 protein_coding retained_intron MGP_CBAJ_T0079460.1 MGP_CBAJ_G0030883.1 mouse_genomes_project 6 133116604 133118087 + Mug1 protein_coding retained_intron MGP_CBAJ_T0079461.1 MGP_CBAJ_G0030883.1 mouse_genomes_project 6 133117527 133126567 + Mug1 protein_coding retained_intron MGP_CBAJ_T0079462.1 MGP_CBAJ_G0030883.1 mouse_genomes_project 6 133184036 133187063 + Mug1 protein_coding retained_intron MGP_CBAJ_T0002027.1 MGP_CBAJ_G0001943.1 mouse_genomes_project 6 95159265 95160352 + TEC TEC MGP_CBAJ_T0015364.1 MGP_CBAJ_G0013476.1 mouse_genomes_project 6 135962694 135963628 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015340.1 MGP_CBAJ_G0013452.1 mouse_genomes_project 6 128479335 128479836 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015410.1 MGP_CBAJ_G0013522.1 mouse_genomes_project 6 145923082 145923508 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010656.1 MGP_CBAJ_G0008794.1 mouse_genomes_project 6 89787183 89787260 - Mir3470a miRNA miRNA MGP_CBAJ_T0002105.1 MGP_CBAJ_G0002020.1 mouse_genomes_project 6 139396411 139396781 - TEC TEC MGP_CBAJ_T0099415.1 MGP_CBAJ_G0037670.1 mouse_genomes_project 6 17102753 17102860 + Gm23648 snRNA snRNA MGP_CBAJ_T0077497.1 MGP_CBAJ_G0030510.1 mouse_genomes_project 6 71299390 71414714 + MGP_CBAJ_P0077497 Gng12 protein_coding protein_coding MGP_CBAJ_T0077498.1 MGP_CBAJ_G0030510.1 mouse_genomes_project 6 71299416 71411293 + MGP_CBAJ_P0077498 Gng12 protein_coding protein_coding MGP_CBAJ_T0077499.1 MGP_CBAJ_G0030510.1 mouse_genomes_project 6 71299424 71411637 + MGP_CBAJ_P0077499 Gng12 protein_coding protein_coding MGP_CBAJ_T0077500.1 MGP_CBAJ_G0030510.1 mouse_genomes_project 6 71299427 71411653 + MGP_CBAJ_P0077500 Gng12 protein_coding protein_coding MGP_CBAJ_T0077501.1 MGP_CBAJ_G0030510.1 mouse_genomes_project 6 71299430 71411265 + MGP_CBAJ_P0077501 Gng12 protein_coding protein_coding MGP_CBAJ_T0077502.1 MGP_CBAJ_G0030510.1 mouse_genomes_project 6 71299433 71412450 + MGP_CBAJ_P0077502 Gng12 protein_coding protein_coding MGP_CBAJ_T0077503.1 MGP_CBAJ_G0030510.1 mouse_genomes_project 6 71299449 71411212 + MGP_CBAJ_P0077503 Gng12 protein_coding protein_coding MGP_CBAJ_T0077504.1 MGP_CBAJ_G0030510.1 mouse_genomes_project 6 71299542 71411510 + MGP_CBAJ_P0077504 Gng12 protein_coding protein_coding MGP_CBAJ_T0077505.1 MGP_CBAJ_G0030510.1 mouse_genomes_project 6 71299884 71410931 + MGP_CBAJ_P0077505 Gng12 protein_coding protein_coding MGP_CBAJ_T0001948.1 MGP_CBAJ_G0001864.1 mouse_genomes_project 6 54894493 54895221 + TEC TEC MGP_CBAJ_T0079601.1 MGP_CBAJ_G0030923.1 mouse_genomes_project 6 136430238 136431773 + Phb2 protein_coding retained_intron MGP_CBAJ_T0079602.1 MGP_CBAJ_G0030923.1 mouse_genomes_project 6 136430238 136430971 + Phb2 protein_coding retained_intron MGP_CBAJ_T0079603.1 MGP_CBAJ_G0030923.1 mouse_genomes_project 6 136430238 136434854 + Phb2 protein_coding retained_intron MGP_CBAJ_T0079604.1 MGP_CBAJ_G0030923.1 mouse_genomes_project 6 136430238 136434854 + MGP_CBAJ_P0079604 Phb2 protein_coding protein_coding MGP_CBAJ_T0079605.1 MGP_CBAJ_G0030923.1 mouse_genomes_project 6 136430668 136432703 + MGP_CBAJ_P0079605 Phb2 protein_coding protein_coding MGP_CBAJ_T0079606.1 MGP_CBAJ_G0030923.1 mouse_genomes_project 6 136431024 136434544 + MGP_CBAJ_P0079606 Phb2 protein_coding protein_coding MGP_CBAJ_T0079607.1 MGP_CBAJ_G0030923.1 mouse_genomes_project 6 136433251 136434854 + Phb2 protein_coding retained_intron MGP_CBAJ_T0079608.1 MGP_CBAJ_G0030923.1 mouse_genomes_project 6 136433266 136434443 + Phb2 protein_coding processed_transcript MGP_CBAJ_T0015025.1 MGP_CBAJ_G0013137.1 mouse_genomes_project 6 8219301 8220202 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015383.1 MGP_CBAJ_G0013495.1 mouse_genomes_project 6 140832117 140832523 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001949.1 MGP_CBAJ_G0001865.1 mouse_genomes_project 6 55199869 55202552 + TEC TEC MGP_CBAJ_T0002039.1 MGP_CBAJ_G0001955.1 mouse_genomes_project 6 97774844 97777960 + TEC TEC MGP_CBAJ_T0077594.1 MGP_CBAJ_G0030532.1 mouse_genomes_project 6 77213900 77245490 + Immt protein_coding retained_intron MGP_CBAJ_T0077595.1 MGP_CBAJ_G0030532.1 mouse_genomes_project 6 77213901 77253796 + MGP_CBAJ_P0077595 Immt protein_coding protein_coding MGP_CBAJ_T0077596.1 MGP_CBAJ_G0030532.1 mouse_genomes_project 6 77213931 77267854 + MGP_CBAJ_P0077596 Immt protein_coding protein_coding MGP_CBAJ_T0077597.1 MGP_CBAJ_G0030532.1 mouse_genomes_project 6 77213934 77267858 + MGP_CBAJ_P0077597 Immt protein_coding protein_coding MGP_CBAJ_T0077598.1 MGP_CBAJ_G0030532.1 mouse_genomes_project 6 77213939 77267847 + MGP_CBAJ_P0077598 Immt protein_coding protein_coding MGP_CBAJ_T0077599.1 MGP_CBAJ_G0030532.1 mouse_genomes_project 6 77213953 77269978 + MGP_CBAJ_P0077599 Immt protein_coding nonsense_mediated_decay MGP_CBAJ_T0077600.1 MGP_CBAJ_G0030532.1 mouse_genomes_project 6 77213980 77247262 + MGP_CBAJ_P0077600 Immt protein_coding protein_coding MGP_CBAJ_T0077601.1 MGP_CBAJ_G0030532.1 mouse_genomes_project 6 77213992 77267858 + MGP_CBAJ_P0077601 Immt protein_coding protein_coding MGP_CBAJ_T0077602.1 MGP_CBAJ_G0030532.1 mouse_genomes_project 6 77256178 77259643 + Immt protein_coding retained_intron MGP_CBAJ_T0077603.1 MGP_CBAJ_G0030532.1 mouse_genomes_project 6 77262628 77265691 + Immt protein_coding retained_intron MGP_CBAJ_T0077604.1 MGP_CBAJ_G0030532.1 mouse_genomes_project 6 77263747 77267851 + Immt protein_coding retained_intron MGP_CBAJ_T0077605.1 MGP_CBAJ_G0030532.1 mouse_genomes_project 6 77264025 77269981 + MGP_CBAJ_P0077605 Immt protein_coding protein_coding MGP_CBAJ_T0077606.1 MGP_CBAJ_G0030532.1 mouse_genomes_project 6 77264111 77267129 + MGP_CBAJ_P0077606 Immt protein_coding protein_coding MGP_CBAJ_T0002062.1 MGP_CBAJ_G0001978.1 mouse_genomes_project 6 108857005 108859525 - TEC TEC MGP_CBAJ_T0002044.1 MGP_CBAJ_G0001960.1 mouse_genomes_project 6 98961259 98962460 + TEC TEC MGP_CBAJ_T0008535.1 MGP_CBAJ_G0006893.1 mouse_genomes_project 6 88485024 88497046 - 1700009C05Rik lincRNA lincRNA MGP_CBAJ_T0018030.1 MGP_CBAJ_G0015381.1 mouse_genomes_project 6 71517908 71571436 + A430010J10Rik processed_transcript lincRNA MGP_CBAJ_T0018031.1 MGP_CBAJ_G0015381.1 mouse_genomes_project 6 71517912 71519270 + A430010J10Rik processed_transcript retained_intron MGP_CBAJ_T0018032.1 MGP_CBAJ_G0015381.1 mouse_genomes_project 6 71567965 71571120 + A430010J10Rik processed_transcript retained_intron MGP_CBAJ_T0018033.1 MGP_CBAJ_G0015381.1 mouse_genomes_project 6 71568244 71568626 + A430010J10Rik processed_transcript pseudogene MGP_CBAJ_T0100652.1 MGP_CBAJ_G0038907.1 mouse_genomes_project 6 23954429 23954560 - Gm22267 snoRNA snoRNA MGP_CBAJ_T0015181.1 MGP_CBAJ_G0013293.1 mouse_genomes_project 6 70933274 70934034 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008633.1 MGP_CBAJ_G0006972.1 mouse_genomes_project 6 141711966 141747838 - 2310001H17Rik lincRNA lincRNA MGP_CBAJ_T0008634.1 MGP_CBAJ_G0006972.1 mouse_genomes_project 6 141718478 141743877 - 2310001H17Rik lincRNA lincRNA MGP_CBAJ_T0008635.1 MGP_CBAJ_G0006972.1 mouse_genomes_project 6 141722085 141747881 - 2310001H17Rik lincRNA lincRNA MGP_CBAJ_T0008636.1 MGP_CBAJ_G0006972.1 mouse_genomes_project 6 141740471 141748615 - 2310001H17Rik lincRNA lincRNA MGP_CBAJ_T0008637.1 MGP_CBAJ_G0006972.1 mouse_genomes_project 6 141740531 141748372 - 2310001H17Rik lincRNA lincRNA MGP_CBAJ_T0008638.1 MGP_CBAJ_G0006972.1 mouse_genomes_project 6 141740636 141743886 - 2310001H17Rik lincRNA lincRNA MGP_CBAJ_T0100685.1 MGP_CBAJ_G0038940.1 mouse_genomes_project 6 92167922 92168038 + Gm22893 snoRNA snoRNA MGP_CBAJ_T0004822.1 MGP_CBAJ_G0004140.1 mouse_genomes_project 6 15212135 15340477 - Gm4876 antisense antisense MGP_CBAJ_T0004823.1 MGP_CBAJ_G0004140.1 mouse_genomes_project 6 15223712 15340821 - Gm4876 antisense antisense MGP_CBAJ_T0004824.1 MGP_CBAJ_G0004140.1 mouse_genomes_project 6 15244528 15340453 - Gm4876 antisense antisense MGP_CBAJ_T0004825.1 MGP_CBAJ_G0004140.1 mouse_genomes_project 6 15260941 15340605 - Gm4876 antisense antisense MGP_CBAJ_T0004826.1 MGP_CBAJ_G0004140.1 mouse_genomes_project 6 15324898 15340734 - Gm4876 antisense antisense MGP_CBAJ_T0004827.1 MGP_CBAJ_G0004140.1 mouse_genomes_project 6 15340376 15340798 - Gm4876 antisense antisense MGP_CBAJ_T0101171.1 MGP_CBAJ_G0039346.1 mouse_genomes_project 6 140412843 140414008 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0078916.1 MGP_CBAJ_G0030788.1 mouse_genomes_project 6 123632434 123636456 - MGP_CBAJ_P0078916 Rpusd3 protein_coding protein_coding MGP_CBAJ_T0078917.1 MGP_CBAJ_G0030788.1 mouse_genomes_project 6 123632444 123636435 - MGP_CBAJ_P0078917 Rpusd3 protein_coding protein_coding MGP_CBAJ_T0078918.1 MGP_CBAJ_G0030788.1 mouse_genomes_project 6 123632663 123633568 - Rpusd3 protein_coding retained_intron MGP_CBAJ_T0078919.1 MGP_CBAJ_G0030788.1 mouse_genomes_project 6 123633221 123636435 - MGP_CBAJ_P0078919 Rpusd3 protein_coding protein_coding MGP_CBAJ_T0078920.1 MGP_CBAJ_G0030788.1 mouse_genomes_project 6 123633425 123636426 - MGP_CBAJ_P0078920 Rpusd3 protein_coding protein_coding MGP_CBAJ_T0078921.1 MGP_CBAJ_G0030788.1 mouse_genomes_project 6 123633904 123636435 - Rpusd3 protein_coding retained_intron MGP_CBAJ_T0078922.1 MGP_CBAJ_G0030788.1 mouse_genomes_project 6 123634009 123636430 - MGP_CBAJ_P0078922 Rpusd3 protein_coding protein_coding MGP_CBAJ_T0078923.1 MGP_CBAJ_G0030788.1 mouse_genomes_project 6 123634311 123636164 - Rpusd3 protein_coding retained_intron MGP_CBAJ_T0078924.1 MGP_CBAJ_G0030788.1 mouse_genomes_project 6 123634338 123636447 - MGP_CBAJ_P0078924 Rpusd3 protein_coding protein_coding MGP_CBAJ_T0078925.1 MGP_CBAJ_G0030788.1 mouse_genomes_project 6 123635419 123636439 - Rpusd3 protein_coding retained_intron MGP_CBAJ_T0079909.1 MGP_CBAJ_G0030979.1 mouse_genomes_project 6 139817704 139907401 - MGP_CBAJ_P0079909 Prmt8 protein_coding protein_coding MGP_CBAJ_T0015362.1 MGP_CBAJ_G0013474.1 mouse_genomes_project 6 135531437 135532284 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0076363.1 MGP_CBAJ_G0030214.1 mouse_genomes_project 6 30384275 30417933 + MGP_CBAJ_P0076363 Cpa4 protein_coding protein_coding MGP_CBAJ_T0004992.1 MGP_CBAJ_G0004255.1 mouse_genomes_project 6 132098616 132133560 + Gm43915 antisense antisense MGP_CBAJ_T0080445.1 MGP_CBAJ_G0031130.1 mouse_genomes_project 6 157072991 157093846 - MGP_CBAJ_P0080445 Ldhb protein_coding protein_coding MGP_CBAJ_T0080446.1 MGP_CBAJ_G0031130.1 mouse_genomes_project 6 157073082 157087231 - MGP_CBAJ_P0080446 Ldhb protein_coding protein_coding MGP_CBAJ_T0080447.1 MGP_CBAJ_G0031130.1 mouse_genomes_project 6 157078314 157093649 - MGP_CBAJ_P0080447 Ldhb protein_coding protein_coding MGP_CBAJ_T0008513.1 MGP_CBAJ_G0006872.1 mouse_genomes_project 6 64145333 64145823 + Gm44410 lincRNA lincRNA MGP_CBAJ_T0099433.1 MGP_CBAJ_G0037688.1 mouse_genomes_project 6 68473453 68473556 + Gm25205 snRNA snRNA MGP_CBAJ_T0008490.1 MGP_CBAJ_G0006855.1 mouse_genomes_project 6 53733893 53738274 - Gm44447 lincRNA lincRNA MGP_CBAJ_T0079830.1 MGP_CBAJ_G0030962.1 mouse_genomes_project 6 137390108 137443978 + MGP_CBAJ_P0079830 Vwf protein_coding protein_coding MGP_CBAJ_T0079831.1 MGP_CBAJ_G0030962.1 mouse_genomes_project 6 137399578 137553215 + MGP_CBAJ_P0079831 Vwf protein_coding protein_coding MGP_CBAJ_T0079832.1 MGP_CBAJ_G0030962.1 mouse_genomes_project 6 137399593 137456578 + Vwf protein_coding retained_intron MGP_CBAJ_T0079833.1 MGP_CBAJ_G0030962.1 mouse_genomes_project 6 137399593 137444275 + MGP_CBAJ_P0079833 Vwf protein_coding protein_coding MGP_CBAJ_T0079834.1 MGP_CBAJ_G0030962.1 mouse_genomes_project 6 137415847 137430383 + Vwf protein_coding processed_transcript MGP_CBAJ_T0079835.1 MGP_CBAJ_G0030962.1 mouse_genomes_project 6 137455351 137503501 + Vwf protein_coding processed_transcript MGP_CBAJ_T0079836.1 MGP_CBAJ_G0030962.1 mouse_genomes_project 6 137492061 137495784 + Vwf protein_coding retained_intron MGP_CBAJ_T0079837.1 MGP_CBAJ_G0030962.1 mouse_genomes_project 6 137506915 137522544 + Vwf protein_coding retained_intron MGP_CBAJ_T0079838.1 MGP_CBAJ_G0030962.1 mouse_genomes_project 6 137509845 137553208 + MGP_CBAJ_P0079838 Vwf protein_coding nonsense_mediated_decay MGP_CBAJ_T0079839.1 MGP_CBAJ_G0030962.1 mouse_genomes_project 6 137515507 137517204 + Vwf protein_coding retained_intron MGP_CBAJ_T0079840.1 MGP_CBAJ_G0030962.1 mouse_genomes_project 6 137552272 137553171 + Vwf protein_coding processed_transcript MGP_CBAJ_T0008516.1 MGP_CBAJ_G0006875.1 mouse_genomes_project 6 64835807 64836495 - Gm43894 lincRNA lincRNA MGP_CBAJ_T0015095.1 MGP_CBAJ_G0013207.1 mouse_genomes_project 6 44568095 44606839 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015433.1 MGP_CBAJ_G0013545.1 mouse_genomes_project 6 155598885 155599415 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0076126.1 MGP_CBAJ_G0030173.1 mouse_genomes_project 6 23795930 23822423 + MGP_CBAJ_P0076126 Hyal4 protein_coding protein_coding MGP_CBAJ_T0079888.1 MGP_CBAJ_G0030975.1 mouse_genomes_project 6 139129344 139150909 - MGP_CBAJ_P0079888 Tigar protein_coding protein_coding MGP_CBAJ_T0079889.1 MGP_CBAJ_G0030975.1 mouse_genomes_project 6 139134424 139150916 - MGP_CBAJ_P0079889 Tigar protein_coding nonsense_mediated_decay MGP_CBAJ_T0100707.1 MGP_CBAJ_G0038962.1 mouse_genomes_project 6 136433134 136433406 + Gm23547 snoRNA snoRNA MGP_CBAJ_T0077054.1 MGP_CBAJ_G0030388.1 mouse_genomes_project 6 51183428 51185260 + Gpnmb protein_coding retained_intron MGP_CBAJ_T0077055.1 MGP_CBAJ_G0030388.1 mouse_genomes_project 6 51183497 51208148 + MGP_CBAJ_P0077055 Gpnmb protein_coding protein_coding MGP_CBAJ_T0077056.1 MGP_CBAJ_G0030388.1 mouse_genomes_project 6 51183547 51192861 + MGP_CBAJ_P0077056 Gpnmb protein_coding nonsense_mediated_decay MGP_CBAJ_T0077057.1 MGP_CBAJ_G0030388.1 mouse_genomes_project 6 51183559 51226571 + MGP_CBAJ_P0077057 Gpnmb protein_coding protein_coding MGP_CBAJ_T0077058.1 MGP_CBAJ_G0030388.1 mouse_genomes_project 6 51197364 51198292 + Gpnmb protein_coding retained_intron MGP_CBAJ_T0002672.1 MGP_CBAJ_G0002552.1 mouse_genomes_project 6 42345854 42346127 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0005009.1 MGP_CBAJ_G0004270.1 mouse_genomes_project 6 139905490 139906834 + Gm42738 antisense antisense MGP_CBAJ_T0099413.1 MGP_CBAJ_G0037668.1 mouse_genomes_project 6 12303556 12303659 - Gm23013 snRNA snRNA MGP_CBAJ_T0002619.1 MGP_CBAJ_G0002506.1 mouse_genomes_project 6 42219535 42220049 + MGP_CBAJ_P0002619 Trbv12-2 TR_V_gene TR_V_gene MGP_CBAJ_T0004852.1 MGP_CBAJ_G0004162.1 mouse_genomes_project 6 39840537 39844258 - 1700025N23Rik antisense antisense MGP_CBAJ_T0015044.1 MGP_CBAJ_G0013156.1 mouse_genomes_project 6 17178612 17178876 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008642.1 MGP_CBAJ_G0006976.1 mouse_genomes_project 6 148352460 148353585 - Gm44238 lincRNA lincRNA MGP_CBAJ_T0080104.1 MGP_CBAJ_G0031040.1 mouse_genomes_project 6 144650877 144651841 - MGP_CBAJ_P0080104 Tas2r105 protein_coding protein_coding MGP_CBAJ_T0008492.1 MGP_CBAJ_G0006857.1 mouse_genomes_project 6 53847764 53862723 - Gm26677 lincRNA lincRNA MGP_CBAJ_T0079285.1 MGP_CBAJ_G0030855.1 mouse_genomes_project 6 130178664 130194310 - MGP_CBAJ_P0079285 Lrtm2 protein_coding protein_coding MGP_CBAJ_T0079286.1 MGP_CBAJ_G0030855.1 mouse_genomes_project 6 130178664 130192749 - MGP_CBAJ_P0079286 Lrtm2 protein_coding protein_coding MGP_CBAJ_T0079287.1 MGP_CBAJ_G0030855.1 mouse_genomes_project 6 130178664 130194301 - MGP_CBAJ_P0079287 Lrtm2 protein_coding protein_coding MGP_CBAJ_T0079288.1 MGP_CBAJ_G0030855.1 mouse_genomes_project 6 130187195 130192749 - MGP_CBAJ_P0079288 Lrtm2 protein_coding protein_coding MGP_CBAJ_T0004821.1 MGP_CBAJ_G0004139.1 mouse_genomes_project 6 5652713 5679579 - Gm16043 antisense antisense MGP_CBAJ_T0101967.1 MGP_CBAJ_G0039998.1 mouse_genomes_project 6 13620 22644 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010682.1 MGP_CBAJ_G0008820.1 mouse_genomes_project 6 131917740 131917837 - Gm25193 miRNA miRNA MGP_CBAJ_T0100677.1 MGP_CBAJ_G0038932.1 mouse_genomes_project 6 72872992 72873137 - Gm25436 snoRNA snoRNA MGP_CBAJ_T0099450.1 MGP_CBAJ_G0037705.1 mouse_genomes_project 6 112848165 112848231 - Gm25656 snRNA snRNA MGP_CBAJ_T0015083.1 MGP_CBAJ_G0013195.1 mouse_genomes_project 6 40780249 40780823 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001911.1 MGP_CBAJ_G0001827.1 mouse_genomes_project 6 33516066 33517678 + TEC TEC MGP_CBAJ_T0099465.1 MGP_CBAJ_G0037720.1 mouse_genomes_project 6 142988066 142988140 + Gm22621 snRNA snRNA MGP_CBAJ_T0077343.1 MGP_CBAJ_G0030452.1 mouse_genomes_project 6 60041770 60046162 + Vmn1r4 protein_coding retained_intron MGP_CBAJ_T0077344.1 MGP_CBAJ_G0030452.1 mouse_genomes_project 6 60041777 60088761 + MGP_CBAJ_P0077344 Vmn1r4 protein_coding protein_coding MGP_CBAJ_T0077345.1 MGP_CBAJ_G0030452.1 mouse_genomes_project 6 60084712 60085746 + MGP_CBAJ_P0077345 Vmn1r4 protein_coding protein_coding MGP_CBAJ_T0077862.1 MGP_CBAJ_G0030587.1 mouse_genomes_project 6 89821017 89823533 - MGP_CBAJ_P0077862 Wbp1 protein_coding protein_coding MGP_CBAJ_T0077863.1 MGP_CBAJ_G0030587.1 mouse_genomes_project 6 89821017 89823533 - MGP_CBAJ_P0077863 Wbp1 protein_coding protein_coding MGP_CBAJ_T0077864.1 MGP_CBAJ_G0030587.1 mouse_genomes_project 6 89821018 89823533 - Wbp1 protein_coding retained_intron MGP_CBAJ_T0077865.1 MGP_CBAJ_G0030587.1 mouse_genomes_project 6 89821280 89823361 - MGP_CBAJ_P0077865 Wbp1 protein_coding protein_coding MGP_CBAJ_T0077866.1 MGP_CBAJ_G0030587.1 mouse_genomes_project 6 89821409 89823380 - MGP_CBAJ_P0077866 Wbp1 protein_coding protein_coding MGP_CBAJ_T0077867.1 MGP_CBAJ_G0030587.1 mouse_genomes_project 6 89821523 89822182 - MGP_CBAJ_P0077867 Wbp1 protein_coding protein_coding MGP_CBAJ_T0077868.1 MGP_CBAJ_G0030587.1 mouse_genomes_project 6 89821608 89822852 - Wbp1 protein_coding retained_intron MGP_CBAJ_T0077869.1 MGP_CBAJ_G0030587.1 mouse_genomes_project 6 89821613 89823233 - Wbp1 protein_coding processed_transcript MGP_CBAJ_T0077870.1 MGP_CBAJ_G0030587.1 mouse_genomes_project 6 89822532 89823248 - MGP_CBAJ_P0077870 Wbp1 protein_coding protein_coding MGP_CBAJ_T0010655.1 MGP_CBAJ_G0008793.1 mouse_genomes_project 6 89745033 89745096 + Mir7040 miRNA miRNA MGP_CBAJ_T0079157.1 MGP_CBAJ_G0030831.1 mouse_genomes_project 6 126779071 126826961 + MGP_CBAJ_P0079157 Zfand4 protein_coding protein_coding MGP_CBAJ_T0015448.1 MGP_CBAJ_G0013560.1 mouse_genomes_project 6 164695341 164695786 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0078518.1 MGP_CBAJ_G0030713.1 mouse_genomes_project 6 99044283 99059044 + MGP_CBAJ_P0078518 Tmem43 protein_coding protein_coding MGP_CBAJ_T0078519.1 MGP_CBAJ_G0030713.1 mouse_genomes_project 6 99044307 99048214 + Tmem43 protein_coding retained_intron MGP_CBAJ_T0078520.1 MGP_CBAJ_G0030713.1 mouse_genomes_project 6 99044331 99045056 + Tmem43 protein_coding processed_transcript MGP_CBAJ_T0078521.1 MGP_CBAJ_G0030713.1 mouse_genomes_project 6 99044339 99049721 + Tmem43 protein_coding retained_intron MGP_CBAJ_T0078522.1 MGP_CBAJ_G0030713.1 mouse_genomes_project 6 99047180 99048838 + Tmem43 protein_coding processed_transcript MGP_CBAJ_T0076352.1 MGP_CBAJ_G0030212.1 mouse_genomes_project 6 30316682 30327187 + MGP_CBAJ_P0076352 Ssmem1 protein_coding protein_coding MGP_CBAJ_T0076353.1 MGP_CBAJ_G0030212.1 mouse_genomes_project 6 30319119 30327188 + MGP_CBAJ_P0076353 Ssmem1 protein_coding protein_coding MGP_CBAJ_T0076354.1 MGP_CBAJ_G0030212.1 mouse_genomes_project 6 30320531 30326478 + MGP_CBAJ_P0076354 Ssmem1 protein_coding protein_coding MGP_CBAJ_T0002613.1 MGP_CBAJ_G0002501.1 mouse_genomes_project 6 42145790 42146329 + MGP_CBAJ_P0002613 Trbv3 TR_V_gene TR_V_gene MGP_CBAJ_T0008504.1 MGP_CBAJ_G0006865.1 mouse_genomes_project 6 55918458 55922183 + Gm4872 lincRNA lincRNA MGP_CBAJ_T0079530.1 MGP_CBAJ_G0030899.1 mouse_genomes_project 6 134494028 134536224 + MGP_CBAJ_P0079530 Clec4a4 protein_coding protein_coding MGP_CBAJ_T0015010.1 MGP_CBAJ_G0013122.1 mouse_genomes_project 6 3463527 3463760 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008556.1 MGP_CBAJ_G0006908.1 mouse_genomes_project 6 94957726 94978454 - 1810020O05Rik lincRNA lincRNA MGP_CBAJ_T0002056.1 MGP_CBAJ_G0001972.1 mouse_genomes_project 6 101229040 101229523 - TEC TEC MGP_CBAJ_T0002125.1 MGP_CBAJ_G0002040.1 mouse_genomes_project 6 150626631 150627135 - TEC TEC MGP_CBAJ_T0080211.1 MGP_CBAJ_G0031081.1 mouse_genomes_project 6 148786310 148787589 - MGP_CBAJ_P0080211 Pbp2 protein_coding protein_coding MGP_CBAJ_T0078652.1 MGP_CBAJ_G0030742.1 mouse_genomes_project 6 105462330 105477818 - MGP_CBAJ_P0078652 Lmod3 protein_coding protein_coding MGP_CBAJ_T0076615.1 MGP_CBAJ_G0030262.1 mouse_genomes_project 6 39261860 39333046 + MGP_CBAJ_P0076615 Luc7l2 protein_coding protein_coding MGP_CBAJ_T0076616.1 MGP_CBAJ_G0030262.1 mouse_genomes_project 6 39261991 39334373 + MGP_CBAJ_P0076616 Luc7l2 protein_coding protein_coding MGP_CBAJ_T0076617.1 MGP_CBAJ_G0030262.1 mouse_genomes_project 6 39261991 39340774 + MGP_CBAJ_P0076617 Luc7l2 protein_coding protein_coding MGP_CBAJ_T0076618.1 MGP_CBAJ_G0030262.1 mouse_genomes_project 6 39262040 39340772 + MGP_CBAJ_P0076618 Luc7l2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076619.1 MGP_CBAJ_G0030262.1 mouse_genomes_project 6 39262120 39270606 + Luc7l2 protein_coding processed_transcript MGP_CBAJ_T0076620.1 MGP_CBAJ_G0030262.1 mouse_genomes_project 6 39262120 39270737 + Luc7l2 protein_coding retained_intron MGP_CBAJ_T0076621.1 MGP_CBAJ_G0030262.1 mouse_genomes_project 6 39262120 39264598 + Luc7l2 protein_coding processed_transcript MGP_CBAJ_T0076622.1 MGP_CBAJ_G0030262.1 mouse_genomes_project 6 39262392 39339468 + MGP_CBAJ_P0076622 Luc7l2 protein_coding protein_coding MGP_CBAJ_T0076623.1 MGP_CBAJ_G0030262.1 mouse_genomes_project 6 39262436 39299250 + Luc7l2 protein_coding processed_transcript MGP_CBAJ_T0076624.1 MGP_CBAJ_G0030262.1 mouse_genomes_project 6 39268411 39303396 + MGP_CBAJ_P0076624 Luc7l2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076625.1 MGP_CBAJ_G0030262.1 mouse_genomes_project 6 39270328 39338986 + MGP_CBAJ_P0076625 Luc7l2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076626.1 MGP_CBAJ_G0030262.1 mouse_genomes_project 6 39271901 39283713 + Luc7l2 protein_coding retained_intron MGP_CBAJ_T0076627.1 MGP_CBAJ_G0030262.1 mouse_genomes_project 6 39284248 39334032 + Luc7l2 protein_coding retained_intron MGP_CBAJ_T0008581.1 MGP_CBAJ_G0006925.1 mouse_genomes_project 6 108484791 108508674 - Gm44442 lincRNA lincRNA MGP_CBAJ_T0008582.1 MGP_CBAJ_G0006925.1 mouse_genomes_project 6 108484792 108488136 - Gm44442 lincRNA lincRNA MGP_CBAJ_T0080073.1 MGP_CBAJ_G0031027.1 mouse_genomes_project 6 142992177 143008796 - MGP_CBAJ_P0080073 protein_coding protein_coding MGP_CBAJ_T0004842.1 MGP_CBAJ_G0004153.1 mouse_genomes_project 6 32443377 32446958 + Plxna4os2 antisense antisense MGP_CBAJ_T0076788.1 MGP_CBAJ_G0030316.1 mouse_genomes_project 6 43483637 43486223 + MGP_CBAJ_P0076788 Tmem139 protein_coding protein_coding MGP_CBAJ_T0008412.1 MGP_CBAJ_G0006804.1 mouse_genomes_project 6 15205931 15212122 - Gm15473 lincRNA lincRNA MGP_CBAJ_T0015107.1 MGP_CBAJ_G0013219.1 mouse_genomes_project 6 49797777 49798174 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011708.1 MGP_CBAJ_G0009823.1 mouse_genomes_project 6 142002423 142016994 - MGP_CBAJ_P0011708 Clec7a polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0011709.1 MGP_CBAJ_G0009823.1 mouse_genomes_project 6 142002423 142016999 - MGP_CBAJ_P0011709 Clec7a polymorphic_pseudogene protein_coding MGP_CBAJ_T0011710.1 MGP_CBAJ_G0009823.1 mouse_genomes_project 6 142003866 142016999 - MGP_CBAJ_P0011710 Clec7a polymorphic_pseudogene protein_coding MGP_CBAJ_T0011711.1 MGP_CBAJ_G0009823.1 mouse_genomes_project 6 142014756 142017001 - Clec7a polymorphic_pseudogene retained_intron MGP_CBAJ_T0001968.1 MGP_CBAJ_G0001884.1 mouse_genomes_project 6 76871078 76874328 - TEC TEC MGP_CBAJ_T0015356.1 MGP_CBAJ_G0013468.1 mouse_genomes_project 6 133988906 133989097 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0077389.1 MGP_CBAJ_G0030481.1 mouse_genomes_project 6 61812683 61813736 - MGP_CBAJ_P0077389 Vmn1r30 protein_coding protein_coding MGP_CBAJ_T0011491.1 MGP_CBAJ_G0009629.1 mouse_genomes_project 6 3969365 3969545 + Gm27699 misc_RNA misc_RNA MGP_CBAJ_T0008495.1 MGP_CBAJ_G0006859.1 mouse_genomes_project 6 54185545 54202273 - Gm44191 lincRNA lincRNA MGP_CBAJ_T0015173.1 MGP_CBAJ_G0013285.1 mouse_genomes_project 6 70149690 70150255 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015186.1 MGP_CBAJ_G0013298.1 mouse_genomes_project 6 71624167 71624810 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004851.1 MGP_CBAJ_G0004161.1 mouse_genomes_project 6 39684840 39752025 - Gm42962 antisense antisense MGP_CBAJ_T0001937.1 MGP_CBAJ_G0001853.1 mouse_genomes_project 6 47703823 47705984 + TEC TEC MGP_CBAJ_T0079628.1 MGP_CBAJ_G0030928.1 mouse_genomes_project 6 136482957 136486513 - Eno2 protein_coding retained_intron MGP_CBAJ_T0079629.1 MGP_CBAJ_G0030928.1 mouse_genomes_project 6 136482959 136493443 - MGP_CBAJ_P0079629 Eno2 protein_coding protein_coding MGP_CBAJ_T0079630.1 MGP_CBAJ_G0030928.1 mouse_genomes_project 6 136482959 136493495 - MGP_CBAJ_P0079630 Eno2 protein_coding protein_coding MGP_CBAJ_T0079631.1 MGP_CBAJ_G0030928.1 mouse_genomes_project 6 136483269 136492159 - Eno2 protein_coding retained_intron MGP_CBAJ_T0079632.1 MGP_CBAJ_G0030928.1 mouse_genomes_project 6 136483825 136493342 - MGP_CBAJ_P0079632 Eno2 protein_coding protein_coding MGP_CBAJ_T0079633.1 MGP_CBAJ_G0030928.1 mouse_genomes_project 6 136484058 136486187 - Eno2 protein_coding retained_intron MGP_CBAJ_T0079634.1 MGP_CBAJ_G0030928.1 mouse_genomes_project 6 136484117 136486223 - Eno2 protein_coding retained_intron MGP_CBAJ_T0079635.1 MGP_CBAJ_G0030928.1 mouse_genomes_project 6 136485557 136486822 - Eno2 protein_coding processed_transcript MGP_CBAJ_T0079636.1 MGP_CBAJ_G0030928.1 mouse_genomes_project 6 136486667 136492152 - MGP_CBAJ_P0079636 Eno2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079637.1 MGP_CBAJ_G0030928.1 mouse_genomes_project 6 136486770 136492198 - MGP_CBAJ_P0079637 Eno2 protein_coding protein_coding MGP_CBAJ_T0079638.1 MGP_CBAJ_G0030928.1 mouse_genomes_project 6 136489962 136493306 - MGP_CBAJ_P0079638 Eno2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079639.1 MGP_CBAJ_G0030928.1 mouse_genomes_project 6 136490043 136492153 - MGP_CBAJ_P0079639 Eno2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079640.1 MGP_CBAJ_G0030928.1 mouse_genomes_project 6 136490106 136493372 - MGP_CBAJ_P0079640 Eno2 protein_coding protein_coding MGP_CBAJ_T0079641.1 MGP_CBAJ_G0030928.1 mouse_genomes_project 6 136490591 136492159 - Eno2 protein_coding retained_intron MGP_CBAJ_T0079642.1 MGP_CBAJ_G0030928.1 mouse_genomes_project 6 136490769 136493338 - Eno2 protein_coding retained_intron MGP_CBAJ_T0079643.1 MGP_CBAJ_G0030928.1 mouse_genomes_project 6 136491529 136493308 - MGP_CBAJ_P0079643 Eno2 protein_coding protein_coding MGP_CBAJ_T0076564.1 MGP_CBAJ_G0030251.1 mouse_genomes_project 6 38056002 38094271 + MGP_CBAJ_P0076564 Akr1d1 protein_coding protein_coding MGP_CBAJ_T0076565.1 MGP_CBAJ_G0030251.1 mouse_genomes_project 6 38069416 38083023 + Akr1d1 protein_coding processed_transcript MGP_CBAJ_T0078087.1 MGP_CBAJ_G0030625.1 mouse_genomes_project 6 92907703 92911457 - MGP_CBAJ_P0078087 Nat8f5 protein_coding protein_coding MGP_CBAJ_T0008385.1 MGP_CBAJ_G0006789.1 mouse_genomes_project 6 1682142 1682522 - Gm20714 lincRNA lincRNA MGP_CBAJ_T0008386.1 MGP_CBAJ_G0006789.1 mouse_genomes_project 6 1682142 1690681 - Gm20714 lincRNA lincRNA MGP_CBAJ_T0008387.1 MGP_CBAJ_G0006789.1 mouse_genomes_project 6 1682144 1687840 - Gm20714 lincRNA lincRNA MGP_CBAJ_T0077053.1 MGP_CBAJ_G0030387.1 mouse_genomes_project 6 51134448 51139310 + MGP_CBAJ_P0077053 Svs1 protein_coding protein_coding MGP_CBAJ_T0018045.1 MGP_CBAJ_G0015386.1 mouse_genomes_project 6 126834814 126838270 - Gm44957 processed_transcript retained_intron MGP_CBAJ_T0018046.1 MGP_CBAJ_G0015386.1 mouse_genomes_project 6 126834829 126838757 - Gm44957 processed_transcript bidirectional_promoter_lncRNA MGP_CBAJ_T0015309.1 MGP_CBAJ_G0013421.1 mouse_genomes_project 6 118861930 118862517 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002626.1 MGP_CBAJ_G0002513.1 mouse_genomes_project 6 42301821 42302495 + MGP_CBAJ_P0002626 Trbv19 TR_V_gene TR_V_gene MGP_CBAJ_T0076728.1 MGP_CBAJ_G0030287.1 mouse_genomes_project 6 41602851 41603912 + MGP_CBAJ_P0076728 Olfr460 protein_coding protein_coding MGP_CBAJ_T0002614.1 MGP_CBAJ_G0002502.1 mouse_genomes_project 6 42154777 42155270 + MGP_CBAJ_P0002614 Trbv4 TR_V_gene TR_V_gene MGP_CBAJ_T0015314.1 MGP_CBAJ_G0013426.1 mouse_genomes_project 6 120170046 120170621 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0077258.1 MGP_CBAJ_G0030433.1 mouse_genomes_project 6 57691651 57780447 + MGP_CBAJ_P0077258 Znrf2 protein_coding protein_coding MGP_CBAJ_T0077259.1 MGP_CBAJ_G0030433.1 mouse_genomes_project 6 57692005 57765294 + MGP_CBAJ_P0077259 Znrf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077260.1 MGP_CBAJ_G0030433.1 mouse_genomes_project 6 57692183 57772058 + MGP_CBAJ_P0077260 Znrf2 protein_coding protein_coding MGP_CBAJ_T0008588.1 MGP_CBAJ_G0006931.1 mouse_genomes_project 6 110579880 110605278 + Gm9871 lincRNA lincRNA MGP_CBAJ_T0008589.1 MGP_CBAJ_G0006931.1 mouse_genomes_project 6 110590589 110605111 + Gm9871 lincRNA lincRNA MGP_CBAJ_T0008590.1 MGP_CBAJ_G0006931.1 mouse_genomes_project 6 110599530 110604906 + Gm9871 lincRNA lincRNA MGP_CBAJ_T0002458.1 MGP_CBAJ_G0002367.1 mouse_genomes_project 6 42771365 42771379 + MGP_CBAJ_P0002458 Trbd2 TR_D_gene TR_D_gene MGP_CBAJ_T0000282.1 MGP_CBAJ_G0000227.1 mouse_genomes_project 6 73604361 73604764 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0078324.1 MGP_CBAJ_G0030671.1 mouse_genomes_project 6 95571161 95572151 + MGP_CBAJ_P0078324 Dnajb8 protein_coding protein_coding MGP_CBAJ_T0078325.1 MGP_CBAJ_G0030671.1 mouse_genomes_project 6 95571778 95605765 + MGP_CBAJ_P0078325 Dnajb8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0015397.1 MGP_CBAJ_G0013509.1 mouse_genomes_project 6 144320826 144322684 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0079868.1 MGP_CBAJ_G0030971.1 mouse_genomes_project 6 138932736 138956449 - MGP_CBAJ_P0079868 Rad51ap1 protein_coding protein_coding MGP_CBAJ_T0079869.1 MGP_CBAJ_G0030971.1 mouse_genomes_project 6 138933101 138935499 - Rad51ap1 protein_coding retained_intron MGP_CBAJ_T0079870.1 MGP_CBAJ_G0030971.1 mouse_genomes_project 6 138933101 138956449 - MGP_CBAJ_P0079870 Rad51ap1 protein_coding protein_coding MGP_CBAJ_T0079871.1 MGP_CBAJ_G0030971.1 mouse_genomes_project 6 138933865 138935405 - Rad51ap1 protein_coding processed_transcript MGP_CBAJ_T0079872.1 MGP_CBAJ_G0030971.1 mouse_genomes_project 6 138933882 138956372 - MGP_CBAJ_P0079872 Rad51ap1 protein_coding unknown_likely_coding MGP_CBAJ_T0079873.1 MGP_CBAJ_G0030971.1 mouse_genomes_project 6 138934676 138937942 - Rad51ap1 protein_coding retained_intron MGP_CBAJ_T0079874.1 MGP_CBAJ_G0030971.1 mouse_genomes_project 6 138936031 138956433 - MGP_CBAJ_P0079874 Rad51ap1 protein_coding protein_coding MGP_CBAJ_T0079875.1 MGP_CBAJ_G0030971.1 mouse_genomes_project 6 138936047 138937780 - Rad51ap1 protein_coding retained_intron MGP_CBAJ_T0079876.1 MGP_CBAJ_G0030971.1 mouse_genomes_project 6 138937316 138956408 - Rad51ap1 protein_coding processed_transcript MGP_CBAJ_T0079877.1 MGP_CBAJ_G0030971.1 mouse_genomes_project 6 138937778 138956437 - MGP_CBAJ_P0079877 Rad51ap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079878.1 MGP_CBAJ_G0030971.1 mouse_genomes_project 6 138938349 138956449 - Rad51ap1 protein_coding retained_intron MGP_CBAJ_T0015216.1 MGP_CBAJ_G0013328.1 mouse_genomes_project 6 77261811 77262605 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0080115.1 MGP_CBAJ_G0031050.1 mouse_genomes_project 6 145879978 145880962 - MGP_CBAJ_P0080115 Tas2r136 protein_coding protein_coding MGP_CBAJ_T0015449.1 MGP_CBAJ_G0013561.1 mouse_genomes_project 6 164759243 164759694 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015081.1 MGP_CBAJ_G0013193.1 mouse_genomes_project 6 39076731 39077154 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0077162.1 MGP_CBAJ_G0030414.1 mouse_genomes_project 6 54789925 54795828 - MGP_CBAJ_P0077162 Hoxa7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077163.1 MGP_CBAJ_G0030414.1 mouse_genomes_project 6 54789932 54792940 - MGP_CBAJ_P0077163 Hoxa7 protein_coding protein_coding MGP_CBAJ_T0077164.1 MGP_CBAJ_G0030414.1 mouse_genomes_project 6 54791187 54794146 - MGP_CBAJ_P0077164 Hoxa7 protein_coding protein_coding MGP_CBAJ_T0077165.1 MGP_CBAJ_G0030414.1 mouse_genomes_project 6 54791443 54798490 - MGP_CBAJ_P0077165 Hoxa7 protein_coding protein_coding MGP_CBAJ_T0077166.1 MGP_CBAJ_G0030414.1 mouse_genomes_project 6 54791874 54792887 - MGP_CBAJ_P0077166 Hoxa7 protein_coding protein_coding MGP_CBAJ_T0078504.1 MGP_CBAJ_G0030710.1 mouse_genomes_project 6 98750823 98810915 + MGP_CBAJ_P0078504 Fbln2 protein_coding protein_coding MGP_CBAJ_T0078505.1 MGP_CBAJ_G0030710.1 mouse_genomes_project 6 98750823 98810916 + MGP_CBAJ_P0078505 Fbln2 protein_coding protein_coding MGP_CBAJ_T0078506.1 MGP_CBAJ_G0030710.1 mouse_genomes_project 6 98751190 98771466 + MGP_CBAJ_P0078506 Fbln2 protein_coding protein_coding MGP_CBAJ_T0078507.1 MGP_CBAJ_G0030710.1 mouse_genomes_project 6 98751192 98771645 + MGP_CBAJ_P0078507 Fbln2 protein_coding protein_coding MGP_CBAJ_T0078508.1 MGP_CBAJ_G0030710.1 mouse_genomes_project 6 98751195 98752595 + Fbln2 protein_coding processed_transcript MGP_CBAJ_T0078509.1 MGP_CBAJ_G0030710.1 mouse_genomes_project 6 98751199 98771665 + MGP_CBAJ_P0078509 Fbln2 protein_coding protein_coding MGP_CBAJ_T0078510.1 MGP_CBAJ_G0030710.1 mouse_genomes_project 6 98794348 98796202 + Fbln2 protein_coding retained_intron MGP_CBAJ_T0078511.1 MGP_CBAJ_G0030710.1 mouse_genomes_project 6 98794751 98801774 + Fbln2 protein_coding retained_intron MGP_CBAJ_T0078512.1 MGP_CBAJ_G0030710.1 mouse_genomes_project 6 98804254 98810807 + Fbln2 protein_coding retained_intron MGP_CBAJ_T0077935.1 MGP_CBAJ_G0030598.1 mouse_genomes_project 6 90217966 90244630 - MGP_CBAJ_P0077935 Dguok protein_coding protein_coding MGP_CBAJ_T0077936.1 MGP_CBAJ_G0030598.1 mouse_genomes_project 6 90217968 90244584 - MGP_CBAJ_P0077936 Dguok protein_coding nonsense_mediated_decay MGP_CBAJ_T0077937.1 MGP_CBAJ_G0030598.1 mouse_genomes_project 6 90218058 90244562 - MGP_CBAJ_P0077937 Dguok protein_coding nonsense_mediated_decay MGP_CBAJ_T0077938.1 MGP_CBAJ_G0030598.1 mouse_genomes_project 6 90218614 90231419 - Dguok protein_coding processed_transcript MGP_CBAJ_T0077939.1 MGP_CBAJ_G0030598.1 mouse_genomes_project 6 90218962 90224768 - Dguok protein_coding processed_transcript MGP_CBAJ_T0077940.1 MGP_CBAJ_G0030598.1 mouse_genomes_project 6 90225736 90228178 - Dguok protein_coding retained_intron MGP_CBAJ_T0077941.1 MGP_CBAJ_G0030598.1 mouse_genomes_project 6 90227965 90244648 - Dguok protein_coding retained_intron MGP_CBAJ_T0080131.1 MGP_CBAJ_G0031064.1 mouse_genomes_project 6 147114914 147118814 - MGP_CBAJ_P0080131 Kap protein_coding protein_coding MGP_CBAJ_T0080132.1 MGP_CBAJ_G0031064.1 mouse_genomes_project 6 147115017 147118725 - MGP_CBAJ_P0080132 Kap protein_coding protein_coding MGP_CBAJ_T0077358.1 MGP_CBAJ_G0030465.1 mouse_genomes_project 6 60583031 60584118 - MGP_CBAJ_P0077358 Vmn1r18 protein_coding protein_coding MGP_CBAJ_T0004996.1 MGP_CBAJ_G0004259.1 mouse_genomes_project 6 136322512 136336191 + antisense antisense MGP_CBAJ_T0010622.1 MGP_CBAJ_G0008760.1 mouse_genomes_project 6 16780103 16780173 - Gm26233 miRNA miRNA MGP_CBAJ_T0099444.1 MGP_CBAJ_G0037699.1 mouse_genomes_project 6 104586092 104586189 - Gm22971 snRNA snRNA MGP_CBAJ_T0002031.1 MGP_CBAJ_G0001947.1 mouse_genomes_project 6 95565138 95565396 - TEC TEC MGP_CBAJ_T0001875.1 MGP_CBAJ_G0001791.1 mouse_genomes_project 6 1834011 1838160 + TEC TEC MGP_CBAJ_T0015305.1 MGP_CBAJ_G0013417.1 mouse_genomes_project 6 117000869 117001518 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0078815.1 MGP_CBAJ_G0030775.1 mouse_genomes_project 6 122742916 122821509 - MGP_CBAJ_P0078815 Rad18 protein_coding protein_coding MGP_CBAJ_T0078816.1 MGP_CBAJ_G0030775.1 mouse_genomes_project 6 122743011 122821427 - MGP_CBAJ_P0078816 Rad18 protein_coding protein_coding MGP_CBAJ_T0078817.1 MGP_CBAJ_G0030775.1 mouse_genomes_project 6 122743039 122821434 - MGP_CBAJ_P0078817 Rad18 protein_coding protein_coding MGP_CBAJ_T0078818.1 MGP_CBAJ_G0030775.1 mouse_genomes_project 6 122743041 122821493 - MGP_CBAJ_P0078818 Rad18 protein_coding protein_coding MGP_CBAJ_T0078819.1 MGP_CBAJ_G0030775.1 mouse_genomes_project 6 122743897 122798522 - MGP_CBAJ_P0078819 Rad18 protein_coding protein_coding MGP_CBAJ_T0078820.1 MGP_CBAJ_G0030775.1 mouse_genomes_project 6 122749475 122821471 - Rad18 protein_coding processed_transcript MGP_CBAJ_T0078821.1 MGP_CBAJ_G0030775.1 mouse_genomes_project 6 122767552 122821456 - MGP_CBAJ_P0078821 Rad18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078822.1 MGP_CBAJ_G0030775.1 mouse_genomes_project 6 122785377 122821467 - Rad18 protein_coding retained_intron MGP_CBAJ_T0001957.1 MGP_CBAJ_G0001873.1 mouse_genomes_project 6 60068064 60071048 - TEC TEC MGP_CBAJ_T0079273.1 MGP_CBAJ_G0030853.1 mouse_genomes_project 6 130026362 130071876 + MGP_CBAJ_P0079273 Dcp1b protein_coding protein_coding MGP_CBAJ_T0079274.1 MGP_CBAJ_G0030853.1 mouse_genomes_project 6 130026397 130070443 + MGP_CBAJ_P0079274 Dcp1b protein_coding protein_coding MGP_CBAJ_T0079275.1 MGP_CBAJ_G0030853.1 mouse_genomes_project 6 130044253 130070464 + Dcp1b protein_coding retained_intron MGP_CBAJ_T0079276.1 MGP_CBAJ_G0030853.1 mouse_genomes_project 6 130054230 130065113 + Dcp1b protein_coding retained_intron MGP_CBAJ_T0079277.1 MGP_CBAJ_G0030853.1 mouse_genomes_project 6 130067801 130071874 + Dcp1b protein_coding retained_intron MGP_CBAJ_T0015357.1 MGP_CBAJ_G0013469.1 mouse_genomes_project 6 133994088 133994848 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0078008.1 MGP_CBAJ_G0030610.1 mouse_genomes_project 6 90846636 91096951 + MGP_CBAJ_P0078008 Dysf protein_coding protein_coding MGP_CBAJ_T0078009.1 MGP_CBAJ_G0030610.1 mouse_genomes_project 6 90846748 91096787 + MGP_CBAJ_P0078009 Dysf protein_coding protein_coding MGP_CBAJ_T0078010.1 MGP_CBAJ_G0030610.1 mouse_genomes_project 6 90846748 91096787 + MGP_CBAJ_P0078010 Dysf protein_coding protein_coding MGP_CBAJ_T0078011.1 MGP_CBAJ_G0030610.1 mouse_genomes_project 6 90846748 91096787 + MGP_CBAJ_P0078011 Dysf protein_coding protein_coding MGP_CBAJ_T0078012.1 MGP_CBAJ_G0030610.1 mouse_genomes_project 6 90846813 91096787 + MGP_CBAJ_P0078012 Dysf protein_coding protein_coding MGP_CBAJ_T0078013.1 MGP_CBAJ_G0030610.1 mouse_genomes_project 6 90846961 91096950 + MGP_CBAJ_P0078013 Dysf protein_coding protein_coding MGP_CBAJ_T0078014.1 MGP_CBAJ_G0030610.1 mouse_genomes_project 6 90858812 91096950 + MGP_CBAJ_P0078014 Dysf protein_coding protein_coding MGP_CBAJ_T0078015.1 MGP_CBAJ_G0030610.1 mouse_genomes_project 6 90858812 91096748 + MGP_CBAJ_P0078015 Dysf protein_coding protein_coding MGP_CBAJ_T0078016.1 MGP_CBAJ_G0030610.1 mouse_genomes_project 6 90858812 91096748 + MGP_CBAJ_P0078016 Dysf protein_coding protein_coding MGP_CBAJ_T0078017.1 MGP_CBAJ_G0030610.1 mouse_genomes_project 6 90858812 91096748 + MGP_CBAJ_P0078017 Dysf protein_coding protein_coding MGP_CBAJ_T0078018.1 MGP_CBAJ_G0030610.1 mouse_genomes_project 6 90858813 91096951 + MGP_CBAJ_P0078018 Dysf protein_coding protein_coding MGP_CBAJ_T0078019.1 MGP_CBAJ_G0030610.1 mouse_genomes_project 6 90858816 91096950 + MGP_CBAJ_P0078019 Dysf protein_coding protein_coding MGP_CBAJ_T0078020.1 MGP_CBAJ_G0030610.1 mouse_genomes_project 6 90975536 90982974 + Dysf protein_coding processed_transcript MGP_CBAJ_T0078021.1 MGP_CBAJ_G0030610.1 mouse_genomes_project 6 90976709 90987654 + Dysf protein_coding retained_intron MGP_CBAJ_T0078022.1 MGP_CBAJ_G0030610.1 mouse_genomes_project 6 91021200 91026864 + Dysf protein_coding processed_transcript MGP_CBAJ_T0078023.1 MGP_CBAJ_G0030610.1 mouse_genomes_project 6 91096374 91096932 + Dysf protein_coding processed_transcript MGP_CBAJ_T0080362.1 MGP_CBAJ_G0031111.1 mouse_genomes_project 6 154295751 154296658 + Capza3 protein_coding processed_transcript MGP_CBAJ_T0080363.1 MGP_CBAJ_G0031111.1 mouse_genomes_project 6 154296056 154297278 + MGP_CBAJ_P0080363 Capza3 protein_coding protein_coding MGP_CBAJ_T0004950.1 MGP_CBAJ_G0004226.1 mouse_genomes_project 6 98095428 98098681 - Gm15756 antisense antisense MGP_CBAJ_T0101152.1 MGP_CBAJ_G0039338.1 mouse_genomes_project 6 9651176 9660948 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101153.1 MGP_CBAJ_G0039338.1 mouse_genomes_project 6 9651368 9651928 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0077350.1 MGP_CBAJ_G0030457.1 mouse_genomes_project 6 60168365 60269291 + MGP_CBAJ_P0077350 protein_coding protein_coding MGP_CBAJ_T0008613.1 MGP_CBAJ_G0006952.1 mouse_genomes_project 6 129043256 129051451 - Gm30498 lincRNA lincRNA MGP_CBAJ_T0077044.1 MGP_CBAJ_G0030384.1 mouse_genomes_project 6 50991232 51037675 + MGP_CBAJ_P0077044 Aoc1 protein_coding protein_coding MGP_CBAJ_T0077045.1 MGP_CBAJ_G0030384.1 mouse_genomes_project 6 51013839 51040987 + MGP_CBAJ_P0077045 Aoc1 protein_coding protein_coding MGP_CBAJ_T0077046.1 MGP_CBAJ_G0030384.1 mouse_genomes_project 6 51036784 51040986 + MGP_CBAJ_P0077046 Aoc1 protein_coding protein_coding MGP_CBAJ_T0077047.1 MGP_CBAJ_G0030384.1 mouse_genomes_project 6 51036784 51040986 + MGP_CBAJ_P0077047 Aoc1 protein_coding protein_coding MGP_CBAJ_T0077048.1 MGP_CBAJ_G0030384.1 mouse_genomes_project 6 51039153 51040450 + Aoc1 protein_coding retained_intron MGP_CBAJ_T0015341.1 MGP_CBAJ_G0013453.1 mouse_genomes_project 6 128715827 128716613 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015144.1 MGP_CBAJ_G0013256.1 mouse_genomes_project 6 62202768 62203014 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0076490.1 MGP_CBAJ_G0030236.1 mouse_genomes_project 6 35000933 35080245 + Agbl3 protein_coding retained_intron MGP_CBAJ_T0076491.1 MGP_CBAJ_G0030236.1 mouse_genomes_project 6 35000933 35090805 + MGP_CBAJ_P0076491 Agbl3 protein_coding protein_coding MGP_CBAJ_T0076492.1 MGP_CBAJ_G0030236.1 mouse_genomes_project 6 35000933 35090805 + MGP_CBAJ_P0076492 Agbl3 protein_coding protein_coding MGP_CBAJ_T0076493.1 MGP_CBAJ_G0030236.1 mouse_genomes_project 6 35000943 35029712 + MGP_CBAJ_P0076493 Agbl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076494.1 MGP_CBAJ_G0030236.1 mouse_genomes_project 6 35000953 35022482 + Agbl3 protein_coding retained_intron MGP_CBAJ_T0076495.1 MGP_CBAJ_G0030236.1 mouse_genomes_project 6 35001349 35092333 + MGP_CBAJ_P0076495 Agbl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076496.1 MGP_CBAJ_G0030236.1 mouse_genomes_project 6 35001376 35031555 + Agbl3 protein_coding retained_intron MGP_CBAJ_T0076497.1 MGP_CBAJ_G0030236.1 mouse_genomes_project 6 35001376 35008664 + MGP_CBAJ_P0076497 Agbl3 protein_coding protein_coding MGP_CBAJ_T0076498.1 MGP_CBAJ_G0030236.1 mouse_genomes_project 6 35001377 35025050 + Agbl3 protein_coding retained_intron MGP_CBAJ_T0076499.1 MGP_CBAJ_G0030236.1 mouse_genomes_project 6 35001390 35008589 + MGP_CBAJ_P0076499 Agbl3 protein_coding protein_coding MGP_CBAJ_T0076500.1 MGP_CBAJ_G0030236.1 mouse_genomes_project 6 35001391 35008628 + MGP_CBAJ_P0076500 Agbl3 protein_coding protein_coding MGP_CBAJ_T0004859.1 MGP_CBAJ_G0004168.1 mouse_genomes_project 6 42043646 42043944 + Gm29588 antisense antisense MGP_CBAJ_T0008454.1 MGP_CBAJ_G0006833.1 mouse_genomes_project 6 34721680 34731810 + Gm13860 lincRNA lincRNA MGP_CBAJ_T0078140.1 MGP_CBAJ_G0030637.1 mouse_genomes_project 6 93588114 93599200 - MGP_CBAJ_P0078140 Pcyox1 protein_coding protein_coding MGP_CBAJ_T0078141.1 MGP_CBAJ_G0030637.1 mouse_genomes_project 6 93590769 93599187 - MGP_CBAJ_P0078141 Pcyox1 protein_coding protein_coding MGP_CBAJ_T0078142.1 MGP_CBAJ_G0030637.1 mouse_genomes_project 6 93591087 93594440 - MGP_CBAJ_P0078142 Pcyox1 protein_coding protein_coding MGP_CBAJ_T0078143.1 MGP_CBAJ_G0030637.1 mouse_genomes_project 6 93593780 93599189 - MGP_CBAJ_P0078143 Pcyox1 protein_coding protein_coding MGP_CBAJ_T0078144.1 MGP_CBAJ_G0030637.1 mouse_genomes_project 6 93596528 93598672 - Pcyox1 protein_coding retained_intron MGP_CBAJ_T0078145.1 MGP_CBAJ_G0030637.1 mouse_genomes_project 6 93597828 93599165 - Pcyox1 protein_coding retained_intron MGP_CBAJ_T0001922.1 MGP_CBAJ_G0001838.1 mouse_genomes_project 6 46611627 46615705 + TEC TEC MGP_CBAJ_T0015338.1 MGP_CBAJ_G0013450.1 mouse_genomes_project 6 127851934 127852311 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015393.1 MGP_CBAJ_G0013505.1 mouse_genomes_project 6 143215750 143216774 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0080645.1 MGP_CBAJ_G0031164.1 mouse_genomes_project 6 162621687 162657013 + MGP_CBAJ_P0080645 Ccdc91 protein_coding protein_coding MGP_CBAJ_T0080646.1 MGP_CBAJ_G0031164.1 mouse_genomes_project 6 162621730 162783382 + MGP_CBAJ_P0080646 Ccdc91 protein_coding protein_coding MGP_CBAJ_T0080647.1 MGP_CBAJ_G0031164.1 mouse_genomes_project 6 162621850 162688046 + MGP_CBAJ_P0080647 Ccdc91 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080648.1 MGP_CBAJ_G0031164.1 mouse_genomes_project 6 162685353 162696789 + Ccdc91 protein_coding processed_transcript MGP_CBAJ_T0008594.1 MGP_CBAJ_G0006935.1 mouse_genomes_project 6 116626348 116743945 - Gm44398 lincRNA lincRNA MGP_CBAJ_T0015329.1 MGP_CBAJ_G0013441.1 mouse_genomes_project 6 125124498 125124886 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0018018.1 MGP_CBAJ_G0015377.1 mouse_genomes_project 6 63873289 64038186 - processed_transcript lincRNA MGP_CBAJ_T0018019.1 MGP_CBAJ_G0015377.1 mouse_genomes_project 6 64020269 64038177 - processed_transcript lincRNA MGP_CBAJ_T0018020.1 MGP_CBAJ_G0015377.1 mouse_genomes_project 6 64021116 64038150 - processed_transcript lincRNA MGP_CBAJ_T0018021.1 MGP_CBAJ_G0015377.1 mouse_genomes_project 6 64021132 64038159 - processed_transcript lincRNA MGP_CBAJ_T0018022.1 MGP_CBAJ_G0015377.1 mouse_genomes_project 6 64030357 64038186 - processed_transcript retained_intron MGP_CBAJ_T0077154.1 MGP_CBAJ_G0030409.1 mouse_genomes_project 6 54740196 54788558 - MGP_CBAJ_P0077154 Hoxa3 protein_coding protein_coding MGP_CBAJ_T0077155.1 MGP_CBAJ_G0030409.1 mouse_genomes_project 6 54746966 54758361 - MGP_CBAJ_P0077155 Hoxa3 protein_coding protein_coding MGP_CBAJ_T0077157.1 MGP_CBAJ_G0030409.1 mouse_genomes_project 6 54755046 54759376 - Hoxa3 protein_coding processed_transcript MGP_CBAJ_T0077159.1 MGP_CBAJ_G0030409.1 mouse_genomes_project 6 54773604 54788779 - Hoxa3 protein_coding retained_intron MGP_CBAJ_T0002065.1 MGP_CBAJ_G0001981.1 mouse_genomes_project 6 109471052 109473130 + TEC TEC MGP_CBAJ_T0000274.1 MGP_CBAJ_G0000219.1 mouse_genomes_project 6 73116679 73116966 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0077028.1 MGP_CBAJ_G0030381.1 mouse_genomes_project 6 50871314 50877720 - MGP_CBAJ_P0077028 Gimap3 protein_coding protein_coding MGP_CBAJ_T0077029.1 MGP_CBAJ_G0030381.1 mouse_genomes_project 6 50871316 50873810 - MGP_CBAJ_P0077029 Gimap3 protein_coding protein_coding MGP_CBAJ_T0008570.1 MGP_CBAJ_G0006917.1 mouse_genomes_project 6 98649440 98650552 - Gm44278 lincRNA lincRNA MGP_CBAJ_T0075729.1 MGP_CBAJ_G0030094.1 mouse_genomes_project 6 207111 244207 - MGP_CBAJ_P0075729 Hepacam2 protein_coding protein_coding MGP_CBAJ_T0075730.1 MGP_CBAJ_G0030094.1 mouse_genomes_project 6 207410 237015 - Hepacam2 protein_coding retained_intron MGP_CBAJ_T0075731.1 MGP_CBAJ_G0030094.1 mouse_genomes_project 6 225693 237029 - MGP_CBAJ_P0075731 Hepacam2 protein_coding protein_coding MGP_CBAJ_T0075732.1 MGP_CBAJ_G0030094.1 mouse_genomes_project 6 232919 247907 - MGP_CBAJ_P0075732 Hepacam2 protein_coding protein_coding MGP_CBAJ_T0075733.1 MGP_CBAJ_G0030094.1 mouse_genomes_project 6 233206 236996 - Hepacam2 protein_coding retained_intron MGP_CBAJ_T0078334.1 MGP_CBAJ_G0030674.1 mouse_genomes_project 6 95875984 95891288 - MGP_CBAJ_P0078334 Sec61a1 protein_coding protein_coding MGP_CBAJ_T0078335.1 MGP_CBAJ_G0030674.1 mouse_genomes_project 6 95877206 95878777 - Sec61a1 protein_coding processed_transcript MGP_CBAJ_T0078336.1 MGP_CBAJ_G0030674.1 mouse_genomes_project 6 95878578 95884789 - Sec61a1 protein_coding processed_transcript MGP_CBAJ_T0078337.1 MGP_CBAJ_G0030674.1 mouse_genomes_project 6 95878734 95886284 - Sec61a1 protein_coding retained_intron MGP_CBAJ_T0078338.1 MGP_CBAJ_G0030674.1 mouse_genomes_project 6 95881084 95885107 - Sec61a1 protein_coding retained_intron MGP_CBAJ_T0078339.1 MGP_CBAJ_G0030674.1 mouse_genomes_project 6 95884422 95885179 - Sec61a1 protein_coding retained_intron MGP_CBAJ_T0078340.1 MGP_CBAJ_G0030674.1 mouse_genomes_project 6 95886193 95891156 - Sec61a1 protein_coding retained_intron MGP_CBAJ_T0078341.1 MGP_CBAJ_G0030674.1 mouse_genomes_project 6 95886589 95888363 - Sec61a1 protein_coding retained_intron MGP_CBAJ_T0078342.1 MGP_CBAJ_G0030674.1 mouse_genomes_project 6 95887708 95891211 - Sec61a1 protein_coding retained_intron MGP_CBAJ_T0078343.1 MGP_CBAJ_G0030674.1 mouse_genomes_project 6 95887746 95891174 - Sec61a1 protein_coding processed_transcript MGP_CBAJ_T0078344.1 MGP_CBAJ_G0030674.1 mouse_genomes_project 6 95887766 95891286 - Sec61a1 protein_coding retained_intron MGP_CBAJ_T0078345.1 MGP_CBAJ_G0030674.1 mouse_genomes_project 6 95890560 95891176 - Sec61a1 protein_coding processed_transcript MGP_CBAJ_T0080437.1 MGP_CBAJ_G0031127.1 mouse_genomes_project 6 156957356 156973017 + MGP_CBAJ_P0080437 Golt1b protein_coding protein_coding MGP_CBAJ_T0080438.1 MGP_CBAJ_G0031127.1 mouse_genomes_project 6 156957388 156970876 + Golt1b protein_coding processed_transcript MGP_CBAJ_T0002115.1 MGP_CBAJ_G0002030.1 mouse_genomes_project 6 142091589 142092280 + TEC TEC MGP_CBAJ_T0004895.1 MGP_CBAJ_G0004195.1 mouse_genomes_project 6 77858766 77860196 - Gm45051 antisense antisense MGP_CBAJ_T0005030.1 MGP_CBAJ_G0004287.1 mouse_genomes_project 6 152542024 152563572 + Gm30332 antisense antisense MGP_CBAJ_T0010643.1 MGP_CBAJ_G0008781.1 mouse_genomes_project 6 53720217 53720316 - Mir148a miRNA miRNA MGP_CBAJ_T0078448.1 MGP_CBAJ_G0030701.1 mouse_genomes_project 6 97821073 97852387 + MGP_CBAJ_P0078448 Uroc1 protein_coding protein_coding MGP_CBAJ_T0078449.1 MGP_CBAJ_G0030701.1 mouse_genomes_project 6 97821078 97852382 + MGP_CBAJ_P0078449 Uroc1 protein_coding protein_coding MGP_CBAJ_T0002081.1 MGP_CBAJ_G0001997.1 mouse_genomes_project 6 122364174 122366697 + TEC TEC MGP_CBAJ_T0077790.1 MGP_CBAJ_G0030571.1 mouse_genomes_project 6 89270497 89363712 - Pole4 protein_coding processed_transcript MGP_CBAJ_T0077791.1 MGP_CBAJ_G0030571.1 mouse_genomes_project 6 89273368 89305006 - MGP_CBAJ_P0077791 Pole4 protein_coding protein_coding MGP_CBAJ_T0077792.1 MGP_CBAJ_G0030571.1 mouse_genomes_project 6 89298836 89305065 - MGP_CBAJ_P0077792 Pole4 protein_coding protein_coding MGP_CBAJ_T0077793.1 MGP_CBAJ_G0030571.1 mouse_genomes_project 6 89299451 89304656 - Pole4 protein_coding processed_transcript MGP_CBAJ_T0077794.1 MGP_CBAJ_G0030571.1 mouse_genomes_project 6 89299978 89304654 - Pole4 protein_coding processed_transcript MGP_CBAJ_T0076698.1 MGP_CBAJ_G0030278.1 mouse_genomes_project 6 40832508 41256785 + MGP_CBAJ_P0076698 Tmem178b protein_coding protein_coding MGP_CBAJ_T0076699.1 MGP_CBAJ_G0030278.1 mouse_genomes_project 6 41090676 41250147 + MGP_CBAJ_P0076699 Tmem178b protein_coding protein_coding MGP_CBAJ_T0076700.1 MGP_CBAJ_G0030278.1 mouse_genomes_project 6 41250610 41256860 + Tmem178b protein_coding retained_intron MGP_CBAJ_T0077334.1 MGP_CBAJ_G0030451.1 mouse_genomes_project 6 59997673 60041688 - MGP_CBAJ_P0077334 Nt5c3 protein_coding protein_coding MGP_CBAJ_T0077335.1 MGP_CBAJ_G0030451.1 mouse_genomes_project 6 59997673 60019676 - MGP_CBAJ_P0077335 Nt5c3 protein_coding protein_coding MGP_CBAJ_T0077336.1 MGP_CBAJ_G0030451.1 mouse_genomes_project 6 59998224 60041575 - MGP_CBAJ_P0077336 Nt5c3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077337.1 MGP_CBAJ_G0030451.1 mouse_genomes_project 6 59998257 60041632 - MGP_CBAJ_P0077337 Nt5c3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077338.1 MGP_CBAJ_G0030451.1 mouse_genomes_project 6 60000064 60041480 - MGP_CBAJ_P0077338 Nt5c3 protein_coding protein_coding MGP_CBAJ_T0077339.1 MGP_CBAJ_G0030451.1 mouse_genomes_project 6 60001938 60005137 - Nt5c3 protein_coding retained_intron MGP_CBAJ_T0077340.1 MGP_CBAJ_G0030451.1 mouse_genomes_project 6 60009338 60041646 - Nt5c3 protein_coding processed_transcript MGP_CBAJ_T0077341.1 MGP_CBAJ_G0030451.1 mouse_genomes_project 6 60010600 60041613 - Nt5c3 protein_coding processed_transcript MGP_CBAJ_T0077342.1 MGP_CBAJ_G0030451.1 mouse_genomes_project 6 60013593 60019673 - Nt5c3 protein_coding retained_intron MGP_CBAJ_T0001950.1 MGP_CBAJ_G0001866.1 mouse_genomes_project 6 55240113 55243858 - TEC TEC MGP_CBAJ_T0102037.1 MGP_CBAJ_G0040067.1 mouse_genomes_project 6 145973672 145974605 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0002524.1 MGP_CBAJ_G0002428.1 mouse_genomes_project 6 42759538 42759588 + MGP_CBAJ_P0002524 Trbj1-5 TR_J_gene TR_J_gene MGP_CBAJ_T0099466.1 MGP_CBAJ_G0037721.1 mouse_genomes_project 6 142988075 142988140 + Gm22555 snRNA snRNA MGP_CBAJ_T0078185.1 MGP_CBAJ_G0030643.1 mouse_genomes_project 6 93886305 93908164 - MGP_CBAJ_P0078185 Mxd1 protein_coding protein_coding MGP_CBAJ_T0078186.1 MGP_CBAJ_G0030643.1 mouse_genomes_project 6 93888279 93902116 - MGP_CBAJ_P0078186 Mxd1 protein_coding protein_coding MGP_CBAJ_T0078187.1 MGP_CBAJ_G0030643.1 mouse_genomes_project 6 93890063 93908103 - MGP_CBAJ_P0078187 Mxd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078188.1 MGP_CBAJ_G0030643.1 mouse_genomes_project 6 93905203 93908120 - Mxd1 protein_coding retained_intron MGP_CBAJ_T0000286.1 MGP_CBAJ_G0000231.1 mouse_genomes_project 6 74064378 74064851 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0101998.1 MGP_CBAJ_G0040029.1 mouse_genomes_project 6 61837698 61838623 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015404.1 MGP_CBAJ_G0013516.1 mouse_genomes_project 6 145460158 145460393 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015019.1 MGP_CBAJ_G0013131.1 mouse_genomes_project 6 5038462 5038652 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000045.1 MGP_CBAJ_G0000036.1 mouse_genomes_project 6 75891539 75891575 + Igkj3 IG_J_gene processed_transcript MGP_CBAJ_T0000046.1 MGP_CBAJ_G0000036.1 mouse_genomes_project 6 75891539 75891577 + MGP_CBAJ_P0000046 Igkj3 IG_J_gene IG_J_gene MGP_CBAJ_T0080545.1 MGP_CBAJ_G0031144.1 mouse_genomes_project 6 160274044 160553855 - MGP_CBAJ_P0080545 Lmntd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080546.1 MGP_CBAJ_G0031144.1 mouse_genomes_project 6 160296009 160350999 - MGP_CBAJ_P0080546 Lmntd1 protein_coding protein_coding MGP_CBAJ_T0080547.1 MGP_CBAJ_G0031144.1 mouse_genomes_project 6 160347230 160351315 - MGP_CBAJ_P0080547 Lmntd1 protein_coding protein_coding MGP_CBAJ_T0080548.1 MGP_CBAJ_G0031144.1 mouse_genomes_project 6 160478041 160553901 - Lmntd1 protein_coding processed_transcript MGP_CBAJ_T0080549.1 MGP_CBAJ_G0031144.1 mouse_genomes_project 6 160515355 160553551 - Lmntd1 protein_coding processed_transcript MGP_CBAJ_T0080244.1 MGP_CBAJ_G0031088.1 mouse_genomes_project 6 150530467 150536100 - MGP_CBAJ_P0080244 Hist4h4 protein_coding protein_coding MGP_CBAJ_T0002034.1 MGP_CBAJ_G0001950.1 mouse_genomes_project 6 96116165 96119053 + TEC TEC MGP_CBAJ_T0076162.1 MGP_CBAJ_G0030182.1 mouse_genomes_project 6 27913345 27916288 + MGP_CBAJ_P0076162 Arf5 protein_coding protein_coding MGP_CBAJ_T0076163.1 MGP_CBAJ_G0030182.1 mouse_genomes_project 6 27913369 27916024 + MGP_CBAJ_P0076163 Arf5 protein_coding protein_coding MGP_CBAJ_T0076164.1 MGP_CBAJ_G0030182.1 mouse_genomes_project 6 27913488 27914405 + Arf5 protein_coding retained_intron MGP_CBAJ_T0015334.1 MGP_CBAJ_G0013446.1 mouse_genomes_project 6 127002217 127002741 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008384.1 MGP_CBAJ_G0006788.1 mouse_genomes_project 6 818179 834077 - Gm43986 lincRNA lincRNA MGP_CBAJ_T0079123.1 MGP_CBAJ_G0030826.1 mouse_genomes_project 6 126382838 126388260 + MGP_CBAJ_P0079123 H1foo protein_coding nonsense_mediated_decay MGP_CBAJ_T0079124.1 MGP_CBAJ_G0030826.1 mouse_genomes_project 6 126382838 126388265 + MGP_CBAJ_P0079124 H1foo protein_coding protein_coding MGP_CBAJ_T0079125.1 MGP_CBAJ_G0030826.1 mouse_genomes_project 6 126382838 126388260 + MGP_CBAJ_P0079125 H1foo protein_coding protein_coding MGP_CBAJ_T0079126.1 MGP_CBAJ_G0030826.1 mouse_genomes_project 6 126382853 126387950 + MGP_CBAJ_P0079126 H1foo protein_coding protein_coding MGP_CBAJ_T0079127.1 MGP_CBAJ_G0030826.1 mouse_genomes_project 6 126386724 126388254 + MGP_CBAJ_P0079127 H1foo protein_coding protein_coding MGP_CBAJ_T0001981.1 MGP_CBAJ_G0001897.1 mouse_genomes_project 6 81413897 81415262 - TEC TEC MGP_CBAJ_T0015072.1 MGP_CBAJ_G0013184.1 mouse_genomes_project 6 35037214 35037411 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010663.1 MGP_CBAJ_G0008801.1 mouse_genomes_project 6 95450079 95450210 - Mir6376 miRNA miRNA MGP_CBAJ_T0077713.1 MGP_CBAJ_G0030551.1 mouse_genomes_project 6 78187347 78367837 - MGP_CBAJ_P0077713 Tcf7l1 protein_coding protein_coding MGP_CBAJ_T0077714.1 MGP_CBAJ_G0030551.1 mouse_genomes_project 6 78188236 78367535 - MGP_CBAJ_P0077714 Tcf7l1 protein_coding protein_coding MGP_CBAJ_T0077715.1 MGP_CBAJ_G0030551.1 mouse_genomes_project 6 78188555 78191155 - Tcf7l1 protein_coding processed_transcript MGP_CBAJ_T0077716.1 MGP_CBAJ_G0030551.1 mouse_genomes_project 6 78193856 78367181 - MGP_CBAJ_P0077716 Tcf7l1 protein_coding protein_coding MGP_CBAJ_T0077717.1 MGP_CBAJ_G0030551.1 mouse_genomes_project 6 78215606 78240615 - Tcf7l1 protein_coding processed_transcript MGP_CBAJ_T0079328.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130898454 130901747 - Wnk1 protein_coding retained_intron MGP_CBAJ_T0079329.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130898454 131037296 - MGP_CBAJ_P0079329 Wnk1 protein_coding protein_coding MGP_CBAJ_T0079330.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130898456 131037279 - MGP_CBAJ_P0079330 Wnk1 protein_coding protein_coding MGP_CBAJ_T0079331.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130898456 131037279 - MGP_CBAJ_P0079331 Wnk1 protein_coding protein_coding MGP_CBAJ_T0079332.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130899106 131036283 - MGP_CBAJ_P0079332 Wnk1 protein_coding protein_coding MGP_CBAJ_T0079333.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130899106 131036283 - MGP_CBAJ_P0079333 Wnk1 protein_coding protein_coding MGP_CBAJ_T0079334.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130901064 130910923 - MGP_CBAJ_P0079334 Wnk1 protein_coding protein_coding MGP_CBAJ_T0079335.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130901610 130912123 - MGP_CBAJ_P0079335 Wnk1 protein_coding protein_coding MGP_CBAJ_T0079336.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130904318 130908802 - MGP_CBAJ_P0079336 Wnk1 protein_coding protein_coding MGP_CBAJ_T0079337.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130904318 130908803 - MGP_CBAJ_P0079337 Wnk1 protein_coding protein_coding MGP_CBAJ_T0079338.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130905253 130908310 - Wnk1 protein_coding retained_intron MGP_CBAJ_T0079339.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130911933 130927456 - MGP_CBAJ_P0079339 Wnk1 protein_coding protein_coding MGP_CBAJ_T0079340.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130912088 130927135 - MGP_CBAJ_P0079340 Wnk1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079341.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130912208 130914575 - Wnk1 protein_coding retained_intron MGP_CBAJ_T0079342.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130923358 130929178 - Wnk1 protein_coding retained_intron MGP_CBAJ_T0079343.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130929352 130931028 - Wnk1 protein_coding retained_intron MGP_CBAJ_T0079344.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130930680 130953595 - MGP_CBAJ_P0079344 Wnk1 protein_coding protein_coding MGP_CBAJ_T0079345.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130930687 130935200 - MGP_CBAJ_P0079345 Wnk1 protein_coding protein_coding MGP_CBAJ_T0079346.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130931898 130975098 - MGP_CBAJ_P0079346 Wnk1 protein_coding protein_coding MGP_CBAJ_T0079347.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130932679 131037231 - Wnk1 protein_coding retained_intron MGP_CBAJ_T0079348.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130932679 130975057 - Wnk1 protein_coding retained_intron MGP_CBAJ_T0079349.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130935125 130941926 - MGP_CBAJ_P0079349 Wnk1 protein_coding protein_coding MGP_CBAJ_T0079350.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130941303 130942729 - MGP_CBAJ_P0079350 Wnk1 protein_coding protein_coding MGP_CBAJ_T0079351.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130954485 130977460 - Wnk1 protein_coding processed_transcript MGP_CBAJ_T0079352.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130954496 130966383 - Wnk1 protein_coding processed_transcript MGP_CBAJ_T0079353.1 MGP_CBAJ_G0030861.1 mouse_genomes_project 6 130955678 130957998 - Wnk1 protein_coding retained_intron MGP_CBAJ_T0015373.1 MGP_CBAJ_G0013485.1 mouse_genomes_project 6 139011606 139011884 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002616.1 MGP_CBAJ_G0002504.1 mouse_genomes_project 6 42214292 42214810 + MGP_CBAJ_P0002616 Trbv12-1 TR_V_gene TR_V_gene MGP_CBAJ_T0076638.1 MGP_CBAJ_G0030266.1 mouse_genomes_project 6 39632182 39720670 + MGP_CBAJ_P0076638 Tbxas1 protein_coding protein_coding MGP_CBAJ_T0076639.1 MGP_CBAJ_G0030266.1 mouse_genomes_project 6 39686722 39861655 + MGP_CBAJ_P0076639 Tbxas1 protein_coding protein_coding MGP_CBAJ_T0076640.1 MGP_CBAJ_G0030266.1 mouse_genomes_project 6 39686747 39796815 + Tbxas1 protein_coding retained_intron MGP_CBAJ_T0076641.1 MGP_CBAJ_G0030266.1 mouse_genomes_project 6 39686766 39861655 + Tbxas1 protein_coding retained_intron MGP_CBAJ_T0076642.1 MGP_CBAJ_G0030266.1 mouse_genomes_project 6 39709104 39769036 + MGP_CBAJ_P0076642 Tbxas1 protein_coding protein_coding MGP_CBAJ_T0076643.1 MGP_CBAJ_G0030266.1 mouse_genomes_project 6 39739557 39751226 + Tbxas1 protein_coding processed_transcript MGP_CBAJ_T0076644.1 MGP_CBAJ_G0030266.1 mouse_genomes_project 6 39751009 39849844 + Tbxas1 protein_coding retained_intron MGP_CBAJ_T0011537.1 MGP_CBAJ_G0009675.1 mouse_genomes_project 6 121622970 121623266 + Gm24005 misc_RNA misc_RNA MGP_CBAJ_T0015254.1 MGP_CBAJ_G0013366.1 mouse_genomes_project 6 92569687 92570156 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0079235.1 MGP_CBAJ_G0030847.1 mouse_genomes_project 6 128889511 128944743 - MGP_CBAJ_P0079235 Ret protein_coding protein_coding MGP_CBAJ_T0079236.1 MGP_CBAJ_G0030847.1 mouse_genomes_project 6 128892332 128945328 - MGP_CBAJ_P0079236 Ret protein_coding protein_coding MGP_CBAJ_T0015251.1 MGP_CBAJ_G0013363.1 mouse_genomes_project 6 92087526 92088283 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0077017.1 MGP_CBAJ_G0030379.1 mouse_genomes_project 6 50839041 50844505 + MGP_CBAJ_P0077017 Gimap1 protein_coding protein_coding MGP_CBAJ_T0077019.1 MGP_CBAJ_G0030379.1 mouse_genomes_project 6 50839060 50842712 + MGP_CBAJ_P0077019 Gimap1 protein_coding protein_coding MGP_CBAJ_T0077020.1 MGP_CBAJ_G0030379.1 mouse_genomes_project 6 50839063 50844509 + MGP_CBAJ_P0077020 Gimap1 protein_coding protein_coding MGP_CBAJ_T0077021.1 MGP_CBAJ_G0030379.1 mouse_genomes_project 6 50839074 50840024 + Gimap1 protein_coding retained_intron MGP_CBAJ_T0077022.1 MGP_CBAJ_G0030379.1 mouse_genomes_project 6 50839094 50841785 + Gimap1 protein_coding retained_intron MGP_CBAJ_T0077023.1 MGP_CBAJ_G0030379.1 mouse_genomes_project 6 50842170 50844510 + Gimap1 protein_coding retained_intron MGP_CBAJ_T0008524.1 MGP_CBAJ_G0006882.1 mouse_genomes_project 6 76641892 76666192 + Gm44174 lincRNA lincRNA MGP_CBAJ_T0015067.1 MGP_CBAJ_G0013179.1 mouse_genomes_project 6 29673107 29673314 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000137.1 MGP_CBAJ_G0000105.1 mouse_genomes_project 6 72298228 72298694 + MGP_CBAJ_P0000137 Igkv14-130 IG_V_gene IG_V_gene MGP_CBAJ_T0000138.1 MGP_CBAJ_G0000105.1 mouse_genomes_project 6 72298228 72298694 + MGP_CBAJ_P0000138 Igkv14-130 IG_V_gene IG_V_gene MGP_CBAJ_T0015059.1 MGP_CBAJ_G0013171.1 mouse_genomes_project 6 23634357 23635066 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0078618.1 MGP_CBAJ_G0030732.1 mouse_genomes_project 6 103132314 103136975 + MGP_CBAJ_P0078618 Kbtbd8 protein_coding protein_coding MGP_CBAJ_T0078619.1 MGP_CBAJ_G0030732.1 mouse_genomes_project 6 103133030 103142025 + MGP_CBAJ_P0078619 Kbtbd8 protein_coding protein_coding MGP_CBAJ_T0078620.1 MGP_CBAJ_G0030732.1 mouse_genomes_project 6 103133055 103136882 + Kbtbd8 protein_coding processed_transcript MGP_CBAJ_T0102023.1 MGP_CBAJ_G0040054.1 mouse_genomes_project 6 135864698 135891428 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015185.1 MGP_CBAJ_G0013297.1 mouse_genomes_project 6 71608143 71608608 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002088.1 MGP_CBAJ_G0002004.1 mouse_genomes_project 6 126004962 126005376 + TEC TEC MGP_CBAJ_T0078907.1 MGP_CBAJ_G0030787.1 mouse_genomes_project 6 123602942 123616585 + MGP_CBAJ_P0078907 Ttll3 protein_coding protein_coding MGP_CBAJ_T0078908.1 MGP_CBAJ_G0030787.1 mouse_genomes_project 6 123604420 123615985 + Ttll3 protein_coding processed_transcript MGP_CBAJ_T0078909.1 MGP_CBAJ_G0030787.1 mouse_genomes_project 6 123609580 123631703 + MGP_CBAJ_P0078909 Ttll3 protein_coding protein_coding MGP_CBAJ_T0078910.1 MGP_CBAJ_G0030787.1 mouse_genomes_project 6 123609619 123631684 + MGP_CBAJ_P0078910 Ttll3 protein_coding protein_coding MGP_CBAJ_T0078911.1 MGP_CBAJ_G0030787.1 mouse_genomes_project 6 123610282 123631699 + MGP_CBAJ_P0078911 Ttll3 protein_coding protein_coding MGP_CBAJ_T0078912.1 MGP_CBAJ_G0030787.1 mouse_genomes_project 6 123610299 123627042 + MGP_CBAJ_P0078912 Ttll3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078913.1 MGP_CBAJ_G0030787.1 mouse_genomes_project 6 123614872 123631677 + Ttll3 protein_coding retained_intron MGP_CBAJ_T0078914.1 MGP_CBAJ_G0030787.1 mouse_genomes_project 6 123626348 123627042 + Ttll3 protein_coding processed_transcript MGP_CBAJ_T0078915.1 MGP_CBAJ_G0030787.1 mouse_genomes_project 6 123629945 123631673 + Ttll3 protein_coding processed_transcript MGP_CBAJ_T0015204.1 MGP_CBAJ_G0013316.1 mouse_genomes_project 6 73029113 73030624 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0004973.1 MGP_CBAJ_G0004240.1 mouse_genomes_project 6 122356546 122359780 - 5031434C07Rik antisense antisense MGP_CBAJ_T0004974.1 MGP_CBAJ_G0004240.1 mouse_genomes_project 6 122356800 122359781 - 5031434C07Rik antisense antisense MGP_CBAJ_T0015090.1 MGP_CBAJ_G0013202.1 mouse_genomes_project 6 42706613 42707060 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0077360.1 MGP_CBAJ_G0030467.1 mouse_genomes_project 6 60746438 60784036 - MGP_CBAJ_P0077360 Ppm1k protein_coding protein_coding MGP_CBAJ_T0077361.1 MGP_CBAJ_G0030467.1 mouse_genomes_project 6 60753608 60755619 - MGP_CBAJ_P0077361 Ppm1k protein_coding protein_coding MGP_CBAJ_T0077362.1 MGP_CBAJ_G0030467.1 mouse_genomes_project 6 60783044 60784078 - Ppm1k protein_coding processed_transcript MGP_CBAJ_T0000300.1 MGP_CBAJ_G0000245.1 mouse_genomes_project 6 75299080 75299352 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0005550.1 MGP_CBAJ_G0004667.1 mouse_genomes_project 6 150184428 150188455 - Gm44140 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_CBAJ_T0100690.1 MGP_CBAJ_G0038945.1 mouse_genomes_project 6 105363419 105363550 - Gm26175 snoRNA snoRNA MGP_CBAJ_T0077013.1 MGP_CBAJ_G0030378.1 mouse_genomes_project 6 50818707 50824702 + MGP_CBAJ_P0077013 Gimap7 protein_coding protein_coding MGP_CBAJ_T0077015.1 MGP_CBAJ_G0030378.1 mouse_genomes_project 6 50818743 50823805 + MGP_CBAJ_P0077015 Gimap7 protein_coding protein_coding MGP_CBAJ_T0077016.1 MGP_CBAJ_G0030378.1 mouse_genomes_project 6 50818751 50819743 + Gimap7 protein_coding retained_intron MGP_CBAJ_T0011493.1 MGP_CBAJ_G0009631.1 mouse_genomes_project 6 4020836 4020982 - Dlx6os1 misc_RNA misc_RNA MGP_CBAJ_T0008546.1 MGP_CBAJ_G0006899.1 mouse_genomes_project 6 91338027 91348926 - Gm10445 lincRNA lincRNA MGP_CBAJ_T0015030.1 MGP_CBAJ_G0013142.1 mouse_genomes_project 6 10744941 10745944 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0078802.1 MGP_CBAJ_G0030770.1 mouse_genomes_project 6 120476275 121453686 + MGP_CBAJ_P0078802 Grm7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078803.1 MGP_CBAJ_G0030770.1 mouse_genomes_project 6 120476275 121549280 + MGP_CBAJ_P0078803 Grm7 protein_coding protein_coding MGP_CBAJ_T0078804.1 MGP_CBAJ_G0030770.1 mouse_genomes_project 6 120476276 121550443 + MGP_CBAJ_P0078804 Grm7 protein_coding protein_coding MGP_CBAJ_T0078805.1 MGP_CBAJ_G0030770.1 mouse_genomes_project 6 121452311 121470424 + MGP_CBAJ_P0078805 Grm7 protein_coding protein_coding MGP_CBAJ_T0078806.1 MGP_CBAJ_G0030770.1 mouse_genomes_project 6 121452340 121472775 + MGP_CBAJ_P0078806 Grm7 protein_coding protein_coding MGP_CBAJ_T0001942.1 MGP_CBAJ_G0001858.1 mouse_genomes_project 6 48199203 48201678 + TEC TEC MGP_CBAJ_T0076447.1 MGP_CBAJ_G0030229.1 mouse_genomes_project 6 34305922 34329672 - MGP_CBAJ_P0076447 Slc35b4 protein_coding protein_coding MGP_CBAJ_T0076448.1 MGP_CBAJ_G0030229.1 mouse_genomes_project 6 34309265 34316025 - Slc35b4 protein_coding retained_intron MGP_CBAJ_T0076449.1 MGP_CBAJ_G0030229.1 mouse_genomes_project 6 34310627 34329531 - Slc35b4 protein_coding retained_intron MGP_CBAJ_T0076450.1 MGP_CBAJ_G0030229.1 mouse_genomes_project 6 34313060 34329643 - MGP_CBAJ_P0076450 Slc35b4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0015312.1 MGP_CBAJ_G0013424.1 mouse_genomes_project 6 119268264 119268517 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0080737.1 MGP_CBAJ_G0031175.1 mouse_genomes_project 6 164766073 164779588 + Bicd1 protein_coding retained_intron MGP_CBAJ_T0080738.1 MGP_CBAJ_G0031175.1 mouse_genomes_project 6 164766171 164946799 + MGP_CBAJ_P0080738 Bicd1 protein_coding protein_coding MGP_CBAJ_T0080739.1 MGP_CBAJ_G0031175.1 mouse_genomes_project 6 164766203 164937993 + MGP_CBAJ_P0080739 Bicd1 protein_coding protein_coding MGP_CBAJ_T0080740.1 MGP_CBAJ_G0031175.1 mouse_genomes_project 6 164766256 164875932 + Bicd1 protein_coding retained_intron MGP_CBAJ_T0080741.1 MGP_CBAJ_G0031175.1 mouse_genomes_project 6 164766616 164936905 + MGP_CBAJ_P0080741 Bicd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080742.1 MGP_CBAJ_G0031175.1 mouse_genomes_project 6 164766616 164936905 + MGP_CBAJ_P0080742 Bicd1 protein_coding protein_coding MGP_CBAJ_T0080743.1 MGP_CBAJ_G0031175.1 mouse_genomes_project 6 164886613 164892097 + Bicd1 protein_coding retained_intron MGP_CBAJ_T0080744.1 MGP_CBAJ_G0031175.1 mouse_genomes_project 6 164889719 164893220 + MGP_CBAJ_P0080744 Bicd1 protein_coding protein_coding MGP_CBAJ_T0080745.1 MGP_CBAJ_G0031175.1 mouse_genomes_project 6 164926253 164939027 + Bicd1 protein_coding retained_intron MGP_CBAJ_T0078264.1 MGP_CBAJ_G0030661.1 mouse_genomes_project 6 95089368 95112218 - MGP_CBAJ_P0078264 Rab43 protein_coding protein_coding MGP_CBAJ_T0078265.1 MGP_CBAJ_G0030661.1 mouse_genomes_project 6 95089368 95110193 - MGP_CBAJ_P0078265 Rab43 protein_coding protein_coding MGP_CBAJ_T0078267.1 MGP_CBAJ_G0030661.1 mouse_genomes_project 6 95089380 95090591 - Rab43 protein_coding processed_transcript MGP_CBAJ_T0078268.1 MGP_CBAJ_G0030661.1 mouse_genomes_project 6 95092014 95110196 - Rab43 protein_coding processed_transcript MGP_CBAJ_T0078269.1 MGP_CBAJ_G0030661.1 mouse_genomes_project 6 95092576 95112603 - Rab43 protein_coding processed_transcript MGP_CBAJ_T0078271.1 MGP_CBAJ_G0030661.1 mouse_genomes_project 6 95093222 95112537 - Rab43 protein_coding processed_transcript MGP_CBAJ_T0078272.1 MGP_CBAJ_G0030661.1 mouse_genomes_project 6 95094393 95112218 - MGP_CBAJ_P0078272 Rab43 protein_coding protein_coding MGP_CBAJ_T0101342.1 MGP_CBAJ_G0039428.1 mouse_genomes_project 6 66976772 66979575 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101343.1 MGP_CBAJ_G0039428.1 mouse_genomes_project 6 66977122 66978529 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0080501.1 MGP_CBAJ_G0031139.1 mouse_genomes_project 6 159858436 159917484 - MGP_CBAJ_P0080501 Bcat1 protein_coding protein_coding MGP_CBAJ_T0080502.1 MGP_CBAJ_G0031139.1 mouse_genomes_project 6 159863789 159955037 - MGP_CBAJ_P0080502 Bcat1 protein_coding protein_coding MGP_CBAJ_T0080503.1 MGP_CBAJ_G0031139.1 mouse_genomes_project 6 159868706 159955037 - MGP_CBAJ_P0080503 Bcat1 protein_coding protein_coding MGP_CBAJ_T0080504.1 MGP_CBAJ_G0031139.1 mouse_genomes_project 6 159868986 159903931 - Bcat1 protein_coding processed_transcript MGP_CBAJ_T0080505.1 MGP_CBAJ_G0031139.1 mouse_genomes_project 6 159872606 159917282 - MGP_CBAJ_P0080505 Bcat1 protein_coding protein_coding MGP_CBAJ_T0080506.1 MGP_CBAJ_G0031139.1 mouse_genomes_project 6 159882856 159901243 - MGP_CBAJ_P0080506 Bcat1 protein_coding protein_coding MGP_CBAJ_T0080507.1 MGP_CBAJ_G0031139.1 mouse_genomes_project 6 159886284 159916527 - MGP_CBAJ_P0080507 Bcat1 protein_coding protein_coding MGP_CBAJ_T0080508.1 MGP_CBAJ_G0031139.1 mouse_genomes_project 6 159901189 159909539 - Bcat1 protein_coding processed_transcript MGP_CBAJ_T0080509.1 MGP_CBAJ_G0031139.1 mouse_genomes_project 6 159901208 159916335 - MGP_CBAJ_P0080509 Bcat1 protein_coding protein_coding MGP_CBAJ_T0080510.1 MGP_CBAJ_G0031139.1 mouse_genomes_project 6 159901272 159909651 - Bcat1 protein_coding processed_transcript MGP_CBAJ_T0079116.1 MGP_CBAJ_G0030825.1 mouse_genomes_project 6 126369704 126377996 + MGP_CBAJ_P0079116 Rho protein_coding protein_coding MGP_CBAJ_T0079117.1 MGP_CBAJ_G0030825.1 mouse_genomes_project 6 126369881 126372065 + Rho protein_coding retained_intron MGP_CBAJ_T0079118.1 MGP_CBAJ_G0030825.1 mouse_genomes_project 6 126370515 126374676 + MGP_CBAJ_P0079118 Rho protein_coding protein_coding MGP_CBAJ_T0079119.1 MGP_CBAJ_G0030825.1 mouse_genomes_project 6 126372308 126374921 + MGP_CBAJ_P0079119 Rho protein_coding protein_coding MGP_CBAJ_T0079120.1 MGP_CBAJ_G0030825.1 mouse_genomes_project 6 126372341 126375041 + MGP_CBAJ_P0079120 Rho protein_coding nonsense_mediated_decay MGP_CBAJ_T0079121.1 MGP_CBAJ_G0030825.1 mouse_genomes_project 6 126372707 126374013 + Rho protein_coding retained_intron MGP_CBAJ_T0079122.1 MGP_CBAJ_G0030825.1 mouse_genomes_project 6 126373166 126374197 + Rho protein_coding retained_intron MGP_CBAJ_T0008674.1 MGP_CBAJ_G0006997.1 mouse_genomes_project 6 162340557 162341824 - Gm15767 lincRNA lincRNA MGP_CBAJ_T0008675.1 MGP_CBAJ_G0006997.1 mouse_genomes_project 6 162340753 162341816 - Gm15767 lincRNA lincRNA MGP_CBAJ_T0015407.1 MGP_CBAJ_G0013519.1 mouse_genomes_project 6 145583569 145584041 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0079436.1 MGP_CBAJ_G0030879.1 mouse_genomes_project 6 132480219 132524224 + MGP_CBAJ_P0079436 Slc6a13 protein_coding protein_coding MGP_CBAJ_T0079437.1 MGP_CBAJ_G0030879.1 mouse_genomes_project 6 132480281 132520089 + Slc6a13 protein_coding retained_intron MGP_CBAJ_T0079438.1 MGP_CBAJ_G0030879.1 mouse_genomes_project 6 132480281 132483293 + Slc6a13 protein_coding retained_intron MGP_CBAJ_T0079439.1 MGP_CBAJ_G0030879.1 mouse_genomes_project 6 132480774 132510844 + MGP_CBAJ_P0079439 Slc6a13 protein_coding protein_coding MGP_CBAJ_T0075863.1 MGP_CBAJ_G0030123.1 mouse_genomes_project 6 5474722 5695589 + MGP_CBAJ_P0075863 Umad1 protein_coding protein_coding MGP_CBAJ_T0075864.1 MGP_CBAJ_G0030123.1 mouse_genomes_project 6 5474784 5659843 + MGP_CBAJ_P0075864 Umad1 protein_coding protein_coding MGP_CBAJ_T0075865.1 MGP_CBAJ_G0030123.1 mouse_genomes_project 6 5474816 5661469 + MGP_CBAJ_P0075865 Umad1 protein_coding protein_coding MGP_CBAJ_T0075866.1 MGP_CBAJ_G0030123.1 mouse_genomes_project 6 5474862 5659984 + MGP_CBAJ_P0075866 Umad1 protein_coding protein_coding MGP_CBAJ_T0075867.1 MGP_CBAJ_G0030123.1 mouse_genomes_project 6 5474864 5661465 + MGP_CBAJ_P0075867 Umad1 protein_coding protein_coding MGP_CBAJ_T0075868.1 MGP_CBAJ_G0030123.1 mouse_genomes_project 6 5474878 5496968 + Umad1 protein_coding processed_transcript MGP_CBAJ_T0075870.1 MGP_CBAJ_G0030123.1 mouse_genomes_project 6 5488610 5661472 + MGP_CBAJ_P0075870 Umad1 protein_coding protein_coding MGP_CBAJ_T0075871.1 MGP_CBAJ_G0030123.1 mouse_genomes_project 6 5652382 5660943 + Umad1 protein_coding processed_transcript MGP_CBAJ_T0076544.1 MGP_CBAJ_G0030244.1 mouse_genomes_project 6 35585127 35628331 - MGP_CBAJ_P0076544 Slc13a4 protein_coding protein_coding MGP_CBAJ_T0076545.1 MGP_CBAJ_G0030244.1 mouse_genomes_project 6 35600541 35608396 - Slc13a4 protein_coding retained_intron MGP_CBAJ_T0076546.1 MGP_CBAJ_G0030244.1 mouse_genomes_project 6 35606724 35628329 - Slc13a4 protein_coding retained_intron MGP_CBAJ_T0015028.1 MGP_CBAJ_G0013140.1 mouse_genomes_project 6 10163853 10165558 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002529.1 MGP_CBAJ_G0002432.1 mouse_genomes_project 6 42772159 42772210 + MGP_CBAJ_P0002529 Trbj2-2 TR_J_gene TR_J_gene MGP_CBAJ_T0080033.1 MGP_CBAJ_G0031012.1 mouse_genomes_project 6 142063111 142069797 + MGP_CBAJ_P0080033 Tmem52b protein_coding protein_coding MGP_CBAJ_T0080034.1 MGP_CBAJ_G0031012.1 mouse_genomes_project 6 142063169 142068029 + MGP_CBAJ_P0080034 Tmem52b protein_coding protein_coding MGP_CBAJ_T0080035.1 MGP_CBAJ_G0031012.1 mouse_genomes_project 6 142066376 142068060 + Tmem52b protein_coding retained_intron MGP_CBAJ_T0080036.1 MGP_CBAJ_G0031012.1 mouse_genomes_project 6 142067126 142068110 + Tmem52b protein_coding retained_intron MGP_CBAJ_T0075752.1 MGP_CBAJ_G0030099.1 mouse_genomes_project 6 788406 792952 + MGP_CBAJ_P0075752 Gng11 protein_coding protein_coding MGP_CBAJ_T0077160.1 MGP_CBAJ_G0030412.1 mouse_genomes_project 6 54776209 54779043 - MGP_CBAJ_P0077160 Hoxa5 protein_coding protein_coding MGP_CBAJ_T0080102.1 MGP_CBAJ_G0031038.1 mouse_genomes_project 6 144642295 144643222 - MGP_CBAJ_P0080102 Tas2r106 protein_coding protein_coding MGP_CBAJ_T0076742.1 MGP_CBAJ_G0030292.1 mouse_genomes_project 6 41992836 41999648 - MGP_CBAJ_P0076742 Prss58 protein_coding protein_coding MGP_CBAJ_T0079509.1 MGP_CBAJ_G0030892.1 mouse_genomes_project 6 134063878 134067388 + MGP_CBAJ_P0079509 Dppa3 protein_coding protein_coding MGP_CBAJ_T0079701.1 MGP_CBAJ_G0030940.1 mouse_genomes_project 6 136666280 136672138 + Mlf2 protein_coding retained_intron MGP_CBAJ_T0079702.1 MGP_CBAJ_G0030940.1 mouse_genomes_project 6 136666299 136669285 + Mlf2 protein_coding retained_intron MGP_CBAJ_T0079703.1 MGP_CBAJ_G0030940.1 mouse_genomes_project 6 136666299 136667583 + Mlf2 protein_coding retained_intron MGP_CBAJ_T0079704.1 MGP_CBAJ_G0030940.1 mouse_genomes_project 6 136666319 136669279 + MGP_CBAJ_P0079704 Mlf2 protein_coding protein_coding MGP_CBAJ_T0079705.1 MGP_CBAJ_G0030940.1 mouse_genomes_project 6 136666326 136671045 + MGP_CBAJ_P0079705 Mlf2 protein_coding protein_coding MGP_CBAJ_T0079706.1 MGP_CBAJ_G0030940.1 mouse_genomes_project 6 136666370 136671044 + MGP_CBAJ_P0079706 Mlf2 protein_coding protein_coding MGP_CBAJ_T0079707.1 MGP_CBAJ_G0030940.1 mouse_genomes_project 6 136666804 136669271 + MGP_CBAJ_P0079707 Mlf2 protein_coding protein_coding MGP_CBAJ_T0079708.1 MGP_CBAJ_G0030940.1 mouse_genomes_project 6 136667518 136670193 + Mlf2 protein_coding retained_intron MGP_CBAJ_T0015023.1 MGP_CBAJ_G0013135.1 mouse_genomes_project 6 7588417 7589480 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0078092.1 MGP_CBAJ_G0030629.1 mouse_genomes_project 6 93038069 93046605 - MGP_CBAJ_P0078092 Nat8f1 protein_coding protein_coding MGP_CBAJ_T0078093.1 MGP_CBAJ_G0030629.1 mouse_genomes_project 6 93038077 93046584 - Nat8f1 protein_coding processed_transcript MGP_CBAJ_T0078094.1 MGP_CBAJ_G0030629.1 mouse_genomes_project 6 93041627 93046522 - MGP_CBAJ_P0078094 Nat8f1 protein_coding protein_coding MGP_CBAJ_T0008527.1 MGP_CBAJ_G0006885.1 mouse_genomes_project 6 77423684 77455679 - lincRNA lincRNA MGP_CBAJ_T0002627.1 MGP_CBAJ_G0002514.1 mouse_genomes_project 6 42311709 42312414 + MGP_CBAJ_P0002627 Trbv20 TR_V_gene TR_V_gene MGP_CBAJ_T0078611.1 MGP_CBAJ_G0030731.1 mouse_genomes_project 6 102561120 102656270 - MGP_CBAJ_P0078611 Lrig1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078612.1 MGP_CBAJ_G0030731.1 mouse_genomes_project 6 102561125 102656257 - MGP_CBAJ_P0078612 Lrig1 protein_coding protein_coding MGP_CBAJ_T0078613.1 MGP_CBAJ_G0030731.1 mouse_genomes_project 6 102561127 102656249 - MGP_CBAJ_P0078613 Lrig1 protein_coding protein_coding MGP_CBAJ_T0078614.1 MGP_CBAJ_G0030731.1 mouse_genomes_project 6 102561271 102561985 - Lrig1 protein_coding processed_transcript MGP_CBAJ_T0078615.1 MGP_CBAJ_G0030731.1 mouse_genomes_project 6 102581057 102636749 - Lrig1 protein_coding processed_transcript MGP_CBAJ_T0078616.1 MGP_CBAJ_G0030731.1 mouse_genomes_project 6 102582521 102611630 - Lrig1 protein_coding processed_transcript MGP_CBAJ_T0078617.1 MGP_CBAJ_G0030731.1 mouse_genomes_project 6 102584173 102634963 - Lrig1 protein_coding processed_transcript MGP_CBAJ_T0077871.1 MGP_CBAJ_G0030588.1 mouse_genomes_project 6 89823738 89827405 - MGP_CBAJ_P0077871 Ino80b protein_coding nonsense_mediated_decay MGP_CBAJ_T0077872.1 MGP_CBAJ_G0030588.1 mouse_genomes_project 6 89823738 89827405 - MGP_CBAJ_P0077872 Ino80b protein_coding protein_coding MGP_CBAJ_T0077873.1 MGP_CBAJ_G0030588.1 mouse_genomes_project 6 89823801 89827003 - MGP_CBAJ_P0077873 Ino80b protein_coding protein_coding MGP_CBAJ_T0077874.1 MGP_CBAJ_G0030588.1 mouse_genomes_project 6 89826386 89826842 - Ino80b protein_coding retained_intron MGP_CBAJ_T0080117.1 MGP_CBAJ_G0031052.1 mouse_genomes_project 6 145945309 145946345 + MGP_CBAJ_P0080117 Tas2r131 protein_coding protein_coding MGP_CBAJ_T0099419.1 MGP_CBAJ_G0037674.1 mouse_genomes_project 6 28678107 28678273 - Gm25589 snRNA snRNA MGP_CBAJ_T0099458.1 MGP_CBAJ_G0037713.1 mouse_genomes_project 6 134737092 134737174 - Gm22946 snRNA snRNA MGP_CBAJ_T0011539.1 MGP_CBAJ_G0009677.1 mouse_genomes_project 6 122028235 122028550 + Gm25454 misc_RNA misc_RNA MGP_CBAJ_T0002028.1 MGP_CBAJ_G0001944.1 mouse_genomes_project 6 95297525 95301064 + TEC TEC MGP_CBAJ_T0008571.1 MGP_CBAJ_G0006918.1 mouse_genomes_project 6 98983842 98996639 - 4930471M09Rik lincRNA lincRNA MGP_CBAJ_T0008572.1 MGP_CBAJ_G0006918.1 mouse_genomes_project 6 98994707 98996697 - 4930471M09Rik lincRNA lincRNA MGP_CBAJ_T0000021.1 MGP_CBAJ_G0000015.1 mouse_genomes_project 6 75894751 75895283 + MGP_CBAJ_P0000021 Igkc IG_C_gene IG_C_gene MGP_CBAJ_T0010653.1 MGP_CBAJ_G0008791.1 mouse_genomes_project 6 88480147 88480221 - Mir7232 miRNA miRNA MGP_CBAJ_T0080025.1 MGP_CBAJ_G0031010.1 mouse_genomes_project 6 141972343 141995195 - MGP_CBAJ_P0080025 Clec1a protein_coding protein_coding MGP_CBAJ_T0080026.1 MGP_CBAJ_G0031010.1 mouse_genomes_project 6 141973392 141995331 - MGP_CBAJ_P0080026 Clec1a protein_coding protein_coding MGP_CBAJ_T0080027.1 MGP_CBAJ_G0031010.1 mouse_genomes_project 6 141973463 141995315 - MGP_CBAJ_P0080027 Clec1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0098438.1 MGP_CBAJ_G0036700.1 mouse_genomes_project 6 94254025 94254673 + Gm44091 sense_intronic sense_intronic MGP_CBAJ_T0015291.1 MGP_CBAJ_G0013403.1 mouse_genomes_project 6 109660220 109665030 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001991.1 MGP_CBAJ_G0001907.1 mouse_genomes_project 6 84105462 84107515 + TEC TEC MGP_CBAJ_T0077414.1 MGP_CBAJ_G0030486.1 mouse_genomes_project 6 62354101 62443233 - MGP_CBAJ_P0077414 Fam13a protein_coding protein_coding MGP_CBAJ_T0077415.1 MGP_CBAJ_G0030486.1 mouse_genomes_project 6 62357596 62443024 - MGP_CBAJ_P0077415 Fam13a protein_coding protein_coding MGP_CBAJ_T0077416.1 MGP_CBAJ_G0030486.1 mouse_genomes_project 6 62395204 62443106 - Fam13a protein_coding processed_transcript MGP_CBAJ_T0077417.1 MGP_CBAJ_G0030486.1 mouse_genomes_project 6 62424129 62443188 - Fam13a protein_coding retained_intron MGP_CBAJ_T0077418.1 MGP_CBAJ_G0030486.1 mouse_genomes_project 6 62438818 62443127 - Fam13a protein_coding retained_intron MGP_CBAJ_T0078077.1 MGP_CBAJ_G0030622.1 mouse_genomes_project 6 92509771 92543204 - MGP_CBAJ_P0078077 Fbxo41 protein_coding protein_coding MGP_CBAJ_T0078078.1 MGP_CBAJ_G0030622.1 mouse_genomes_project 6 92509775 92543096 - MGP_CBAJ_P0078078 Fbxo41 protein_coding protein_coding MGP_CBAJ_T0078079.1 MGP_CBAJ_G0030622.1 mouse_genomes_project 6 92509777 92543068 - MGP_CBAJ_P0078079 Fbxo41 protein_coding protein_coding MGP_CBAJ_T0100700.1 MGP_CBAJ_G0038955.1 mouse_genomes_project 6 134993397 134993529 - Gm22722 snoRNA snoRNA MGP_CBAJ_T0076758.1 MGP_CBAJ_G0030303.1 mouse_genomes_project 6 42855444 42871439 - MGP_CBAJ_P0076758 Trpv6 protein_coding protein_coding MGP_CBAJ_T0076759.1 MGP_CBAJ_G0030303.1 mouse_genomes_project 6 42855447 42871439 - MGP_CBAJ_P0076759 Trpv6 protein_coding protein_coding MGP_CBAJ_T0076760.1 MGP_CBAJ_G0030303.1 mouse_genomes_project 6 42858315 42871414 - Trpv6 protein_coding retained_intron MGP_CBAJ_T0101997.1 MGP_CBAJ_G0040028.1 mouse_genomes_project 6 61621538 61622464 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0004886.1 MGP_CBAJ_G0004187.1 mouse_genomes_project 6 62386751 62423181 + BB365896 antisense antisense MGP_CBAJ_T0015432.1 MGP_CBAJ_G0013544.1 mouse_genomes_project 6 155449814 155449931 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015222.1 MGP_CBAJ_G0013334.1 mouse_genomes_project 6 79172567 79172986 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0075969.1 MGP_CBAJ_G0030141.1 mouse_genomes_project 6 15212274 15252411 + MGP_CBAJ_P0075969 Tes protein_coding protein_coding MGP_CBAJ_T0075970.1 MGP_CBAJ_G0030141.1 mouse_genomes_project 6 15212285 15216075 + Tes protein_coding retained_intron MGP_CBAJ_T0075971.1 MGP_CBAJ_G0030141.1 mouse_genomes_project 6 15212293 15243976 + MGP_CBAJ_P0075971 Tes protein_coding protein_coding MGP_CBAJ_T0075972.1 MGP_CBAJ_G0030141.1 mouse_genomes_project 6 15212317 15235448 + Tes protein_coding processed_transcript MGP_CBAJ_T0075973.1 MGP_CBAJ_G0030141.1 mouse_genomes_project 6 15212349 15252416 + MGP_CBAJ_P0075973 Tes protein_coding protein_coding MGP_CBAJ_T0015179.1 MGP_CBAJ_G0013291.1 mouse_genomes_project 6 70859661 70860241 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0076750.1 MGP_CBAJ_G0030298.1 mouse_genomes_project 6 42515858 42522663 + MGP_CBAJ_P0076750 Try10 protein_coding protein_coding MGP_CBAJ_T0015068.1 MGP_CBAJ_G0013180.1 mouse_genomes_project 6 30554833 30555064 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010691.1 MGP_CBAJ_G0008829.1 mouse_genomes_project 6 140270728 140270838 - Gm26338 miRNA miRNA MGP_CBAJ_T0076859.1 MGP_CBAJ_G0030342.1 mouse_genomes_project 6 44490751 44498605 + MGP_CBAJ_P0076859 Olfr437 protein_coding protein_coding MGP_CBAJ_T0076860.1 MGP_CBAJ_G0030342.1 mouse_genomes_project 6 44497587 44498605 + MGP_CBAJ_P0076860 Olfr437 protein_coding protein_coding MGP_CBAJ_T0076464.1 MGP_CBAJ_G0030233.1 mouse_genomes_project 6 34589757 34600574 + MGP_CBAJ_P0076464 Akr1b7 protein_coding protein_coding MGP_CBAJ_T0001919.1 MGP_CBAJ_G0001835.1 mouse_genomes_project 6 41987094 41988437 - TEC TEC MGP_CBAJ_T0015352.1 MGP_CBAJ_G0013464.1 mouse_genomes_project 6 133355217 133355349 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0080631.1 MGP_CBAJ_G0031159.1 mouse_genomes_project 6 162077374 162079036 + MGP_CBAJ_P0080631 Rep15 protein_coding protein_coding MGP_CBAJ_T0077506.1 MGP_CBAJ_G0030511.1 mouse_genomes_project 6 71428531 71430842 - MGP_CBAJ_P0077506 Gadd45a protein_coding protein_coding MGP_CBAJ_T0077507.1 MGP_CBAJ_G0030511.1 mouse_genomes_project 6 71428894 71430637 - Gadd45a protein_coding retained_intron MGP_CBAJ_T0077508.1 MGP_CBAJ_G0030511.1 mouse_genomes_project 6 71428894 71430800 - MGP_CBAJ_P0077508 Gadd45a protein_coding protein_coding MGP_CBAJ_T0077509.1 MGP_CBAJ_G0030511.1 mouse_genomes_project 6 71428901 71430687 - MGP_CBAJ_P0077509 Gadd45a protein_coding protein_coding MGP_CBAJ_T0077510.1 MGP_CBAJ_G0030511.1 mouse_genomes_project 6 71429014 71430622 - Gadd45a protein_coding retained_intron MGP_CBAJ_T0077511.1 MGP_CBAJ_G0030511.1 mouse_genomes_project 6 71429806 71430813 - Gadd45a protein_coding retained_intron MGP_CBAJ_T0077512.1 MGP_CBAJ_G0030511.1 mouse_genomes_project 6 71430332 71430893 - Gadd45a protein_coding retained_intron MGP_CBAJ_T0000148.1 MGP_CBAJ_G0000113.1 mouse_genomes_project 6 72662130 72662428 + MGP_CBAJ_P0000148 Igkv9-120 IG_V_gene IG_V_gene MGP_CBAJ_T0000149.1 MGP_CBAJ_G0000113.1 mouse_genomes_project 6 72662141 72662428 + MGP_CBAJ_P0000149 Igkv9-120 IG_V_gene IG_V_gene MGP_CBAJ_T0076863.1 MGP_CBAJ_G0030345.1 mouse_genomes_project 6 44555564 44556620 + MGP_CBAJ_P0076863 Olfr434 protein_coding protein_coding MGP_CBAJ_T0076864.1 MGP_CBAJ_G0030345.1 mouse_genomes_project 6 44555592 44556795 + MGP_CBAJ_P0076864 Olfr434 protein_coding protein_coding MGP_CBAJ_T0080121.1 MGP_CBAJ_G0031056.1 mouse_genomes_project 6 146046867 146047869 - MGP_CBAJ_P0080121 Tas2r110 protein_coding protein_coding MGP_CBAJ_T0005003.1 MGP_CBAJ_G0004265.1 mouse_genomes_project 6 138706662 138729568 + Gm26673 antisense antisense MGP_CBAJ_T0076574.1 MGP_CBAJ_G0030253.1 mouse_genomes_project 6 38592754 38658959 - MGP_CBAJ_P0076574 Svopl protein_coding protein_coding MGP_CBAJ_T0076575.1 MGP_CBAJ_G0030253.1 mouse_genomes_project 6 38593527 38642223 - MGP_CBAJ_P0076575 Svopl protein_coding nonsense_mediated_decay MGP_CBAJ_T0076576.1 MGP_CBAJ_G0030253.1 mouse_genomes_project 6 38626116 38634488 - Svopl protein_coding retained_intron MGP_CBAJ_T0076577.1 MGP_CBAJ_G0030253.1 mouse_genomes_project 6 38626422 38629867 - Svopl protein_coding retained_intron MGP_CBAJ_T0076578.1 MGP_CBAJ_G0030253.1 mouse_genomes_project 6 38626575 38658959 - Svopl protein_coding retained_intron MGP_CBAJ_T0076324.1 MGP_CBAJ_G0030208.1 mouse_genomes_project 6 29964842 30071566 - MGP_CBAJ_P0076324 Ube2h protein_coding unknown_likely_coding MGP_CBAJ_T0000293.1 MGP_CBAJ_G0000238.1 mouse_genomes_project 6 74658388 74658866 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0078389.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96276682 96286647 + MGP_CBAJ_P0078389 Tpra1 protein_coding protein_coding MGP_CBAJ_T0078390.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96276730 96283830 + Tpra1 protein_coding processed_transcript MGP_CBAJ_T0078391.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96276748 96280529 + Tpra1 protein_coding retained_intron MGP_CBAJ_T0078392.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96276748 96280996 + Tpra1 protein_coding processed_transcript MGP_CBAJ_T0078393.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96276764 96286647 + MGP_CBAJ_P0078393 Tpra1 protein_coding protein_coding MGP_CBAJ_T0078394.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96276768 96284779 + Tpra1 protein_coding processed_transcript MGP_CBAJ_T0078395.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96276773 96284643 + MGP_CBAJ_P0078395 Tpra1 protein_coding protein_coding MGP_CBAJ_T0078396.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96276783 96284627 + MGP_CBAJ_P0078396 Tpra1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078397.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96276884 96286647 + MGP_CBAJ_P0078397 Tpra1 protein_coding protein_coding MGP_CBAJ_T0078398.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96280065 96283717 + Tpra1 protein_coding processed_transcript MGP_CBAJ_T0078399.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96280377 96286647 + MGP_CBAJ_P0078399 Tpra1 protein_coding protein_coding MGP_CBAJ_T0078400.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96280386 96282189 + Tpra1 protein_coding processed_transcript MGP_CBAJ_T0078401.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96280388 96286163 + MGP_CBAJ_P0078401 Tpra1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078402.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96280406 96285236 + MGP_CBAJ_P0078402 Tpra1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078403.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96280472 96285064 + MGP_CBAJ_P0078403 Tpra1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078404.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96282403 96286654 + MGP_CBAJ_P0078404 Tpra1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078405.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96282403 96286400 + MGP_CBAJ_P0078405 Tpra1 protein_coding protein_coding MGP_CBAJ_T0078406.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96282417 96285517 + MGP_CBAJ_P0078406 Tpra1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078407.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96282616 96283943 + Tpra1 protein_coding processed_transcript MGP_CBAJ_T0078408.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96282616 96283959 + Tpra1 protein_coding retained_intron MGP_CBAJ_T0078409.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96284573 96285365 + Tpra1 protein_coding retained_intron MGP_CBAJ_T0078410.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96284638 96284914 + Tpra1 protein_coding retained_intron MGP_CBAJ_T0078411.1 MGP_CBAJ_G0030680.1 mouse_genomes_project 6 96285014 96286171 + Tpra1 protein_coding retained_intron MGP_CBAJ_T0008502.1 MGP_CBAJ_G0006863.1 mouse_genomes_project 6 55120775 55128405 + 1700094M24Rik lincRNA lincRNA MGP_CBAJ_T0015418.1 MGP_CBAJ_G0013530.1 mouse_genomes_project 6 148588355 148588729 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005047.1 MGP_CBAJ_G0004303.1 mouse_genomes_project 6 162578063 162621675 - Gm6288 antisense antisense MGP_CBAJ_T0005048.1 MGP_CBAJ_G0004303.1 mouse_genomes_project 6 162620993 162621906 - Gm6288 antisense antisense MGP_CBAJ_T0002134.1 MGP_CBAJ_G0002049.1 mouse_genomes_project 6 154988103 154990360 - TEC TEC MGP_CBAJ_T0004951.1 MGP_CBAJ_G0004227.1 mouse_genomes_project 6 98193678 98194777 + Gm44123 antisense antisense MGP_CBAJ_T0000181.1 MGP_CBAJ_G0000136.1 mouse_genomes_project 6 74672469 74672969 - MGP_CBAJ_P0000181 Igkv12-46 IG_V_gene IG_V_gene MGP_CBAJ_T0078726.1 MGP_CBAJ_G0030755.1 mouse_genomes_project 6 109876252 110127958 - MGP_CBAJ_P0078726 Pdzrn3 protein_coding protein_coding MGP_CBAJ_T0078727.1 MGP_CBAJ_G0030755.1 mouse_genomes_project 6 109883465 110102793 - Pdzrn3 protein_coding processed_transcript MGP_CBAJ_T0078728.1 MGP_CBAJ_G0030755.1 mouse_genomes_project 6 109896210 109926195 - Pdzrn3 protein_coding retained_intron MGP_CBAJ_T0078729.1 MGP_CBAJ_G0030755.1 mouse_genomes_project 6 109906232 110127403 - Pdzrn3 protein_coding processed_transcript MGP_CBAJ_T0080619.1 MGP_CBAJ_G0031158.1 mouse_genomes_project 6 161987674 161991765 - MGP_CBAJ_P0080619 1700034J05Rik protein_coding protein_coding MGP_CBAJ_T0080620.1 MGP_CBAJ_G0031158.1 mouse_genomes_project 6 161988643 161991757 - MGP_CBAJ_P0080620 1700034J05Rik protein_coding protein_coding MGP_CBAJ_T0077069.1 MGP_CBAJ_G0030391.1 mouse_genomes_project 6 51424866 51450846 - MGP_CBAJ_P0077069 Tra2a protein_coding protein_coding MGP_CBAJ_T0077070.1 MGP_CBAJ_G0030391.1 mouse_genomes_project 6 51424866 51450847 - MGP_CBAJ_P0077070 Tra2a protein_coding nonsense_mediated_decay MGP_CBAJ_T0077071.1 MGP_CBAJ_G0030391.1 mouse_genomes_project 6 51424870 51450869 - Tra2a protein_coding retained_intron MGP_CBAJ_T0077072.1 MGP_CBAJ_G0030391.1 mouse_genomes_project 6 51424870 51450866 - MGP_CBAJ_P0077072 Tra2a protein_coding protein_coding MGP_CBAJ_T0077073.1 MGP_CBAJ_G0030391.1 mouse_genomes_project 6 51447115 51450866 - Tra2a protein_coding retained_intron MGP_CBAJ_T0002634.1 MGP_CBAJ_G0002518.1 mouse_genomes_project 6 42402520 42403008 + MGP_CBAJ_P0002634 Trbv29 TR_V_gene TR_V_gene MGP_CBAJ_T0000043.1 MGP_CBAJ_G0000035.1 mouse_genomes_project 6 75891232 75891271 + MGP_CBAJ_P0000043 Igkj2 IG_J_gene IG_J_gene MGP_CBAJ_T0000044.1 MGP_CBAJ_G0000035.1 mouse_genomes_project 6 75891232 75891275 + Igkj2 IG_J_gene processed_transcript MGP_CBAJ_T0076302.1 MGP_CBAJ_G0030206.1 mouse_genomes_project 6 29623843 29669149 + MGP_CBAJ_P0076302 Strip2 protein_coding protein_coding MGP_CBAJ_T0076303.1 MGP_CBAJ_G0030206.1 mouse_genomes_project 6 29623844 29652364 + Strip2 protein_coding retained_intron MGP_CBAJ_T0076304.1 MGP_CBAJ_G0030206.1 mouse_genomes_project 6 29623844 29667246 + Strip2 protein_coding retained_intron MGP_CBAJ_T0076305.1 MGP_CBAJ_G0030206.1 mouse_genomes_project 6 29623844 29669155 + MGP_CBAJ_P0076305 Strip2 protein_coding protein_coding MGP_CBAJ_T0076306.1 MGP_CBAJ_G0030206.1 mouse_genomes_project 6 29623844 29653886 + MGP_CBAJ_P0076306 Strip2 protein_coding protein_coding MGP_CBAJ_T0015074.1 MGP_CBAJ_G0013186.1 mouse_genomes_project 6 37022083 37022288 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0079183.1 MGP_CBAJ_G0030835.1 mouse_genomes_project 6 127094675 127097807 + MGP_CBAJ_P0079183 Olfr213 protein_coding protein_coding MGP_CBAJ_T0008684.1 MGP_CBAJ_G0007004.1 mouse_genomes_project 6 164190478 164195798 - Gm43913 lincRNA lincRNA MGP_CBAJ_T0001935.1 MGP_CBAJ_G0001851.1 mouse_genomes_project 6 47696644 47698599 + TEC TEC MGP_CBAJ_T0018011.1 MGP_CBAJ_G0015374.1 mouse_genomes_project 6 57036301 57045456 - Gm15527 processed_transcript retained_intron MGP_CBAJ_T0018012.1 MGP_CBAJ_G0015374.1 mouse_genomes_project 6 57038726 57069614 - Gm15527 processed_transcript antisense MGP_CBAJ_T0018013.1 MGP_CBAJ_G0015374.1 mouse_genomes_project 6 57038742 57069616 - Gm15527 processed_transcript antisense MGP_CBAJ_T0076877.1 MGP_CBAJ_G0030349.1 mouse_genomes_project 6 44725517 45070762 - MGP_CBAJ_P0076877 Tpk1 protein_coding protein_coding MGP_CBAJ_T0076878.1 MGP_CBAJ_G0030349.1 mouse_genomes_project 6 44725589 45029681 - Tpk1 protein_coding processed_transcript MGP_CBAJ_T0076879.1 MGP_CBAJ_G0030349.1 mouse_genomes_project 6 44725790 45070659 - MGP_CBAJ_P0076879 Tpk1 protein_coding protein_coding MGP_CBAJ_T0076880.1 MGP_CBAJ_G0030349.1 mouse_genomes_project 6 44727358 44865941 - Tpk1 protein_coding processed_transcript MGP_CBAJ_T0076881.1 MGP_CBAJ_G0030349.1 mouse_genomes_project 6 44991142 45070703 - Tpk1 protein_coding processed_transcript MGP_CBAJ_T0076882.1 MGP_CBAJ_G0030349.1 mouse_genomes_project 6 44992496 45070365 - Tpk1 protein_coding processed_transcript MGP_CBAJ_T0099441.1 MGP_CBAJ_G0037696.1 mouse_genomes_project 6 90520161 90520258 + Gm25054 snRNA snRNA MGP_CBAJ_T0010680.1 MGP_CBAJ_G0008818.1 mouse_genomes_project 6 129210449 129210532 + Gm25953 miRNA miRNA MGP_CBAJ_T0008479.1 MGP_CBAJ_G0006847.1 mouse_genomes_project 6 50856525 50857758 - Gm44226 lincRNA lincRNA MGP_CBAJ_T0075918.1 MGP_CBAJ_G0030132.1 mouse_genomes_project 6 10869877 10983722 - MGP_CBAJ_P0075918 protein_coding protein_coding MGP_CBAJ_T0075919.1 MGP_CBAJ_G0030132.1 mouse_genomes_project 6 10889794 10902376 - protein_coding retained_intron MGP_CBAJ_T0075920.1 MGP_CBAJ_G0030132.1 mouse_genomes_project 6 10911619 10983722 - MGP_CBAJ_P0075920 protein_coding protein_coding MGP_CBAJ_T0098077.1 MGP_CBAJ_G0036350.1 mouse_genomes_project 6 121594670 121594781 + Gm22093 rRNA rRNA MGP_CBAJ_T0000163.1 MGP_CBAJ_G0000123.1 mouse_genomes_project 6 73371910 73372380 + MGP_CBAJ_P0000163 Igkv10-95 IG_V_gene IG_V_gene MGP_CBAJ_T0000164.1 MGP_CBAJ_G0000123.1 mouse_genomes_project 6 73372093 73372380 + MGP_CBAJ_P0000164 Igkv10-95 IG_V_gene IG_V_gene MGP_CBAJ_T0077218.1 MGP_CBAJ_G0030426.1 mouse_genomes_project 6 56811581 56842407 + Chn2 protein_coding processed_transcript MGP_CBAJ_T0077219.1 MGP_CBAJ_G0030426.1 mouse_genomes_project 6 56811600 57092578 + MGP_CBAJ_P0077219 Chn2 protein_coding protein_coding MGP_CBAJ_T0077220.1 MGP_CBAJ_G0030426.1 mouse_genomes_project 6 56811640 57011078 + MGP_CBAJ_P0077220 Chn2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077221.1 MGP_CBAJ_G0030426.1 mouse_genomes_project 6 56812066 57013040 + Chn2 protein_coding processed_transcript MGP_CBAJ_T0077222.1 MGP_CBAJ_G0030426.1 mouse_genomes_project 6 56812113 56984176 + MGP_CBAJ_P0077222 Chn2 protein_coding protein_coding MGP_CBAJ_T0077223.1 MGP_CBAJ_G0030426.1 mouse_genomes_project 6 56872410 57011045 + Chn2 protein_coding processed_transcript MGP_CBAJ_T0077224.1 MGP_CBAJ_G0030426.1 mouse_genomes_project 6 57055426 57092150 + MGP_CBAJ_P0077224 Chn2 protein_coding protein_coding MGP_CBAJ_T0077225.1 MGP_CBAJ_G0030426.1 mouse_genomes_project 6 57057683 57091942 + MGP_CBAJ_P0077225 Chn2 protein_coding protein_coding MGP_CBAJ_T0077226.1 MGP_CBAJ_G0030426.1 mouse_genomes_project 6 57059702 57092248 + MGP_CBAJ_P0077226 Chn2 protein_coding protein_coding MGP_CBAJ_T0077227.1 MGP_CBAJ_G0030426.1 mouse_genomes_project 6 57063027 57093667 + MGP_CBAJ_P0077227 Chn2 protein_coding protein_coding MGP_CBAJ_T0077228.1 MGP_CBAJ_G0030426.1 mouse_genomes_project 6 57063445 57092101 + MGP_CBAJ_P0077228 Chn2 protein_coding protein_coding MGP_CBAJ_T0077229.1 MGP_CBAJ_G0030426.1 mouse_genomes_project 6 57063445 57092101 + MGP_CBAJ_P0077229 Chn2 protein_coding protein_coding MGP_CBAJ_T0077230.1 MGP_CBAJ_G0030426.1 mouse_genomes_project 6 57063445 57092101 + MGP_CBAJ_P0077230 Chn2 protein_coding protein_coding MGP_CBAJ_T0077231.1 MGP_CBAJ_G0030426.1 mouse_genomes_project 6 57063445 57092101 + MGP_CBAJ_P0077231 Chn2 protein_coding protein_coding MGP_CBAJ_T0077232.1 MGP_CBAJ_G0030426.1 mouse_genomes_project 6 57063445 57092101 + MGP_CBAJ_P0077232 Chn2 protein_coding protein_coding MGP_CBAJ_T0008671.1 MGP_CBAJ_G0006995.1 mouse_genomes_project 6 161679659 161680972 + lincRNA lincRNA MGP_CBAJ_T0015413.1 MGP_CBAJ_G0013525.1 mouse_genomes_project 6 146207798 146208447 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0018034.1 MGP_CBAJ_G0015382.1 mouse_genomes_project 6 78168189 78174130 + Gm20536 processed_transcript processed_transcript MGP_CBAJ_T0076587.1 MGP_CBAJ_G0030256.1 mouse_genomes_project 6 38743938 38893930 - MGP_CBAJ_P0076587 D630045J12Rik protein_coding unknown_likely_coding MGP_CBAJ_T0076588.1 MGP_CBAJ_G0030256.1 mouse_genomes_project 6 38743940 38893876 - MGP_CBAJ_P0076588 D630045J12Rik protein_coding protein_coding MGP_CBAJ_T0076589.1 MGP_CBAJ_G0030256.1 mouse_genomes_project 6 38743942 38893930 - MGP_CBAJ_P0076589 D630045J12Rik protein_coding protein_coding MGP_CBAJ_T0076590.1 MGP_CBAJ_G0030256.1 mouse_genomes_project 6 38746788 38770677 - D630045J12Rik protein_coding retained_intron MGP_CBAJ_T0076591.1 MGP_CBAJ_G0030256.1 mouse_genomes_project 6 38746794 38770620 - D630045J12Rik protein_coding retained_intron MGP_CBAJ_T0076592.1 MGP_CBAJ_G0030256.1 mouse_genomes_project 6 38758194 38827486 - D630045J12Rik protein_coding retained_intron MGP_CBAJ_T0076593.1 MGP_CBAJ_G0030256.1 mouse_genomes_project 6 38784925 38798593 - D630045J12Rik protein_coding retained_intron MGP_CBAJ_T0000153.1 MGP_CBAJ_G0000116.1 mouse_genomes_project 6 73069356 73069854 + MGP_CBAJ_P0000153 Igkv16-104 IG_V_gene IG_V_gene MGP_CBAJ_T0099449.1 MGP_CBAJ_G0037704.1 mouse_genomes_project 6 112605068 112605130 + Gm24784 snRNA snRNA MGP_CBAJ_T0004942.1 MGP_CBAJ_G0004220.1 mouse_genomes_project 6 95571495 95574572 - 1700031F10Rik antisense antisense MGP_CBAJ_T0004943.1 MGP_CBAJ_G0004220.1 mouse_genomes_project 6 95571497 95572533 - 1700031F10Rik antisense antisense MGP_CBAJ_T0077712.1 MGP_CBAJ_G0030550.1 mouse_genomes_project 6 78166789 78174944 - MGP_CBAJ_P0077712 Tgoln1 protein_coding protein_coding MGP_CBAJ_T0008599.1 MGP_CBAJ_G0006940.1 mouse_genomes_project 6 123872657 123874153 - 1700015O11Rik lincRNA lincRNA MGP_CBAJ_T0075854.1 MGP_CBAJ_G0030120.1 mouse_genomes_project 6 5185177 5401507 - MGP_CBAJ_P0075854 Col28a1 protein_coding protein_coding MGP_CBAJ_T0075855.1 MGP_CBAJ_G0030120.1 mouse_genomes_project 6 5185851 5377986 - MGP_CBAJ_P0075855 Col28a1 protein_coding unknown_likely_coding MGP_CBAJ_T0075856.1 MGP_CBAJ_G0030120.1 mouse_genomes_project 6 5208751 5210228 - Col28a1 protein_coding processed_transcript MGP_CBAJ_T0075857.1 MGP_CBAJ_G0030120.1 mouse_genomes_project 6 5267457 5272274 - Col28a1 protein_coding retained_intron MGP_CBAJ_T0078968.1 MGP_CBAJ_G0030798.1 mouse_genomes_project 6 123845867 123858051 + MGP_CBAJ_P0078968 Brk1 protein_coding protein_coding MGP_CBAJ_T0008452.1 MGP_CBAJ_G0006831.1 mouse_genomes_project 6 34109451 34116913 - Gm13853 lincRNA lincRNA MGP_CBAJ_T0100705.1 MGP_CBAJ_G0038960.1 mouse_genomes_project 6 135802049 135802168 + Gm22916 snoRNA snoRNA MGP_CBAJ_T0002007.1 MGP_CBAJ_G0001923.1 mouse_genomes_project 6 92689221 92691511 + TEC TEC MGP_CBAJ_T0078053.1 MGP_CBAJ_G0030618.1 mouse_genomes_project 6 92462323 92469101 + MGP_CBAJ_P0078053 Noto protein_coding protein_coding MGP_CBAJ_T0078054.1 MGP_CBAJ_G0030618.1 mouse_genomes_project 6 92462505 92468509 + MGP_CBAJ_P0078054 Noto protein_coding protein_coding MGP_CBAJ_T0079440.1 MGP_CBAJ_G0030880.1 mouse_genomes_project 6 132529600 132552083 + MGP_CBAJ_P0079440 Slc6a12 protein_coding protein_coding MGP_CBAJ_T0079441.1 MGP_CBAJ_G0030880.1 mouse_genomes_project 6 132529923 132534132 + MGP_CBAJ_P0079441 Slc6a12 protein_coding protein_coding MGP_CBAJ_T0079442.1 MGP_CBAJ_G0030880.1 mouse_genomes_project 6 132533142 132552486 + MGP_CBAJ_P0079442 Slc6a12 protein_coding protein_coding MGP_CBAJ_T0079443.1 MGP_CBAJ_G0030880.1 mouse_genomes_project 6 132533943 132541847 + MGP_CBAJ_P0079443 Slc6a12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079444.1 MGP_CBAJ_G0030880.1 mouse_genomes_project 6 132533943 132552083 + MGP_CBAJ_P0079444 Slc6a12 protein_coding protein_coding MGP_CBAJ_T0079445.1 MGP_CBAJ_G0030880.1 mouse_genomes_project 6 132543340 132548659 + Slc6a12 protein_coding retained_intron MGP_CBAJ_T0079446.1 MGP_CBAJ_G0030880.1 mouse_genomes_project 6 132543353 132550075 + Slc6a12 protein_coding retained_intron MGP_CBAJ_T0079447.1 MGP_CBAJ_G0030880.1 mouse_genomes_project 6 132543438 132552083 + MGP_CBAJ_P0079447 Slc6a12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079448.1 MGP_CBAJ_G0030880.1 mouse_genomes_project 6 132543438 132552083 + MGP_CBAJ_P0079448 Slc6a12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079449.1 MGP_CBAJ_G0030880.1 mouse_genomes_project 6 132545469 132550605 + Slc6a12 protein_coding retained_intron MGP_CBAJ_T0002137.1 MGP_CBAJ_G0002052.1 mouse_genomes_project 6 158728223 158730351 - TEC TEC MGP_CBAJ_T0001882.1 MGP_CBAJ_G0001798.1 mouse_genomes_project 6 4525875 4528553 + TEC TEC MGP_CBAJ_T0080411.1 MGP_CBAJ_G0031122.1 mouse_genomes_project 6 156614770 156716483 - MGP_CBAJ_P0080411 Slco1a6 protein_coding protein_coding MGP_CBAJ_T0080412.1 MGP_CBAJ_G0031122.1 mouse_genomes_project 6 156647493 156716479 - Slco1a6 protein_coding retained_intron MGP_CBAJ_T0080413.1 MGP_CBAJ_G0031122.1 mouse_genomes_project 6 156696345 156741568 - MGP_CBAJ_P0080413 Slco1a6 protein_coding protein_coding MGP_CBAJ_T0011511.1 MGP_CBAJ_G0009649.1 mouse_genomes_project 6 49724377 49724479 + Rny3 misc_RNA misc_RNA MGP_CBAJ_T0004846.1 MGP_CBAJ_G0004157.1 mouse_genomes_project 6 34448906 34489095 + Gm14546 antisense antisense MGP_CBAJ_T0015367.1 MGP_CBAJ_G0013479.1 mouse_genomes_project 6 136985041 136985361 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015108.1 MGP_CBAJ_G0013220.1 mouse_genomes_project 6 49950555 49951429 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0080198.1 MGP_CBAJ_G0031078.1 mouse_genomes_project 6 148591767 148624018 - MGP_CBAJ_P0080198 Hebp1 protein_coding protein_coding MGP_CBAJ_T0080199.1 MGP_CBAJ_G0031078.1 mouse_genomes_project 6 148607007 148623995 - Hebp1 protein_coding processed_transcript MGP_CBAJ_T0080200.1 MGP_CBAJ_G0031078.1 mouse_genomes_project 6 148609410 148666363 - Hebp1 protein_coding processed_transcript MGP_CBAJ_T0080201.1 MGP_CBAJ_G0031078.1 mouse_genomes_project 6 148621365 148623938 - Hebp1 protein_coding retained_intron MGP_CBAJ_T0015140.1 MGP_CBAJ_G0013252.1 mouse_genomes_project 6 61779157 61779526 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001899.1 MGP_CBAJ_G0001815.1 mouse_genomes_project 6 27693031 27700035 - TEC TEC MGP_CBAJ_T0075994.1 MGP_CBAJ_G0030145.1 mouse_genomes_project 6 15857789 15879882 + Capza2 protein_coding processed_transcript MGP_CBAJ_T0075995.1 MGP_CBAJ_G0030145.1 mouse_genomes_project 6 15858538 15890495 + MGP_CBAJ_P0075995 Capza2 protein_coding protein_coding MGP_CBAJ_T0075996.1 MGP_CBAJ_G0030145.1 mouse_genomes_project 6 15858590 15883078 + Capza2 protein_coding retained_intron MGP_CBAJ_T0075997.1 MGP_CBAJ_G0030145.1 mouse_genomes_project 6 15858597 15879832 + Capza2 protein_coding processed_transcript MGP_CBAJ_T0075998.1 MGP_CBAJ_G0030145.1 mouse_genomes_project 6 15858665 15889113 + MGP_CBAJ_P0075998 Capza2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0075999.1 MGP_CBAJ_G0030145.1 mouse_genomes_project 6 15858668 15884279 + MGP_CBAJ_P0075999 Capza2 protein_coding protein_coding MGP_CBAJ_T0076000.1 MGP_CBAJ_G0030145.1 mouse_genomes_project 6 15884074 15889209 + Capza2 protein_coding retained_intron MGP_CBAJ_T0005051.1 MGP_CBAJ_G0004306.1 mouse_genomes_project 6 164223493 164225748 + 3010003L21Rik antisense antisense MGP_CBAJ_T0005052.1 MGP_CBAJ_G0004306.1 mouse_genomes_project 6 164223493 164225756 + 3010003L21Rik antisense antisense MGP_CBAJ_T0011527.1 MGP_CBAJ_G0009665.1 mouse_genomes_project 6 60815214 60817626 + Gm27896 misc_RNA misc_RNA MGP_CBAJ_T0005017.1 MGP_CBAJ_G0004276.1 mouse_genomes_project 6 141527409 141529660 - Gm44000 antisense antisense MGP_CBAJ_T0015122.1 MGP_CBAJ_G0013234.1 mouse_genomes_project 6 51786118 51786864 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008413.1 MGP_CBAJ_G0006805.1 mouse_genomes_project 6 15370800 15379824 + D830026I12Rik lincRNA lincRNA MGP_CBAJ_T0008414.1 MGP_CBAJ_G0006805.1 mouse_genomes_project 6 15371156 15380730 + D830026I12Rik lincRNA lincRNA MGP_CBAJ_T0008415.1 MGP_CBAJ_G0006805.1 mouse_genomes_project 6 15371171 15385198 + D830026I12Rik lincRNA lincRNA MGP_CBAJ_T0010626.1 MGP_CBAJ_G0008764.1 mouse_genomes_project 6 28566690 28566763 + Mir129-1 miRNA miRNA MGP_CBAJ_T0079232.1 MGP_CBAJ_G0030846.1 mouse_genomes_project 6 128845194 128867367 - Csgalnact2 protein_coding retained_intron MGP_CBAJ_T0079233.1 MGP_CBAJ_G0030846.1 mouse_genomes_project 6 128845194 128876887 - MGP_CBAJ_P0079233 Csgalnact2 protein_coding protein_coding MGP_CBAJ_T0079234.1 MGP_CBAJ_G0030846.1 mouse_genomes_project 6 128847078 128864153 - MGP_CBAJ_P0079234 Csgalnact2 protein_coding protein_coding MGP_CBAJ_T0000290.1 MGP_CBAJ_G0000235.1 mouse_genomes_project 6 74326367 74361679 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0015164.1 MGP_CBAJ_G0013276.1 mouse_genomes_project 6 69312027 69312821 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0078823.1 MGP_CBAJ_G0030776.1 mouse_genomes_project 6 122846693 123096206 - MGP_CBAJ_P0078823 Srgap3 protein_coding protein_coding MGP_CBAJ_T0078824.1 MGP_CBAJ_G0030776.1 mouse_genomes_project 6 122846696 123095694 - MGP_CBAJ_P0078824 Srgap3 protein_coding protein_coding MGP_CBAJ_T0078825.1 MGP_CBAJ_G0030776.1 mouse_genomes_project 6 122867750 122897292 - MGP_CBAJ_P0078825 Srgap3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078826.1 MGP_CBAJ_G0030776.1 mouse_genomes_project 6 122896918 123096206 - Srgap3 protein_coding retained_intron MGP_CBAJ_T0078827.1 MGP_CBAJ_G0030776.1 mouse_genomes_project 6 122931249 122967311 - Srgap3 protein_coding retained_intron MGP_CBAJ_T0002069.1 MGP_CBAJ_G0001985.1 mouse_genomes_project 6 110068853 110071706 - TEC TEC MGP_CBAJ_T0079071.1 MGP_CBAJ_G0030816.1 mouse_genomes_project 6 125979286 125989590 - MGP_CBAJ_P0079071 Mkrn2os protein_coding nonsense_mediated_decay MGP_CBAJ_T0079072.1 MGP_CBAJ_G0030816.1 mouse_genomes_project 6 125980875 125989617 - MGP_CBAJ_P0079072 Mkrn2os protein_coding protein_coding MGP_CBAJ_T0101349.1 MGP_CBAJ_G0039431.1 mouse_genomes_project 6 133332797 133343683 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0079073.1 MGP_CBAJ_G0030817.1 mouse_genomes_project 6 125998875 126019939 + MGP_CBAJ_P0079073 Mkrn2 protein_coding protein_coding MGP_CBAJ_T0079074.1 MGP_CBAJ_G0030817.1 mouse_genomes_project 6 125998934 126010760 + Mkrn2 protein_coding processed_transcript MGP_CBAJ_T0079075.1 MGP_CBAJ_G0030817.1 mouse_genomes_project 6 126008697 126009759 + Mkrn2 protein_coding retained_intron MGP_CBAJ_T0100682.1 MGP_CBAJ_G0038937.1 mouse_genomes_project 6 80063681 80063813 + Gm26179 snoRNA snoRNA MGP_CBAJ_T0077549.1 MGP_CBAJ_G0030522.1 mouse_genomes_project 6 76479672 76540819 - MGP_CBAJ_P0077549 Smyd1 protein_coding protein_coding MGP_CBAJ_T0077550.1 MGP_CBAJ_G0030522.1 mouse_genomes_project 6 76479674 76540791 - MGP_CBAJ_P0077550 Smyd1 protein_coding protein_coding MGP_CBAJ_T0077551.1 MGP_CBAJ_G0030522.1 mouse_genomes_project 6 76481071 76608686 - MGP_CBAJ_P0077551 Smyd1 protein_coding protein_coding MGP_CBAJ_T0077552.1 MGP_CBAJ_G0030522.1 mouse_genomes_project 6 76481229 76482604 - MGP_CBAJ_P0077552 Smyd1 protein_coding protein_coding MGP_CBAJ_T0077553.1 MGP_CBAJ_G0030522.1 mouse_genomes_project 6 76537295 76540770 - MGP_CBAJ_P0077553 Smyd1 protein_coding protein_coding MGP_CBAJ_T0077558.1 MGP_CBAJ_G0030522.1 mouse_genomes_project 6 76593117 76608659 - MGP_CBAJ_P0077558 Smyd1 protein_coding protein_coding MGP_CBAJ_T0102005.1 MGP_CBAJ_G0040036.1 mouse_genomes_project 6 69655681 69656927 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0079128.1 MGP_CBAJ_G0030827.1 mouse_genomes_project 6 126392893 126440962 - MGP_CBAJ_P0079128 Plxnd1 protein_coding protein_coding MGP_CBAJ_T0079129.1 MGP_CBAJ_G0030827.1 mouse_genomes_project 6 126393722 126394927 - Plxnd1 protein_coding retained_intron MGP_CBAJ_T0079130.1 MGP_CBAJ_G0030827.1 mouse_genomes_project 6 126393888 126394453 - Plxnd1 protein_coding retained_intron MGP_CBAJ_T0079131.1 MGP_CBAJ_G0030827.1 mouse_genomes_project 6 126396652 126398118 - Plxnd1 protein_coding retained_intron MGP_CBAJ_T0079132.1 MGP_CBAJ_G0030827.1 mouse_genomes_project 6 126405057 126407516 - MGP_CBAJ_P0079132 Plxnd1 protein_coding protein_coding MGP_CBAJ_T0002043.1 MGP_CBAJ_G0001959.1 mouse_genomes_project 6 98742667 98745496 - TEC TEC MGP_CBAJ_T0076861.1 MGP_CBAJ_G0030343.1 mouse_genomes_project 6 44504529 44505583 + MGP_CBAJ_P0076861 Olfr13 protein_coding protein_coding MGP_CBAJ_T0100658.1 MGP_CBAJ_G0038913.1 mouse_genomes_project 6 39781338 39781464 + Gm23010 snoRNA snoRNA MGP_CBAJ_T0077273.1 MGP_CBAJ_G0030436.1 mouse_genomes_project 6 57948923 57995251 + MGP_CBAJ_P0077273 Gars protein_coding protein_coding MGP_CBAJ_T0077274.1 MGP_CBAJ_G0030436.1 mouse_genomes_project 6 57959111 57964906 + Gars protein_coding retained_intron MGP_CBAJ_T0077275.1 MGP_CBAJ_G0030436.1 mouse_genomes_project 6 57964034 57977068 + Gars protein_coding retained_intron MGP_CBAJ_T0001891.1 MGP_CBAJ_G0001807.1 mouse_genomes_project 6 16390277 16392097 - TEC TEC MGP_CBAJ_T0004954.1 MGP_CBAJ_G0004230.1 mouse_genomes_project 6 100659138 101033429 + antisense antisense MGP_CBAJ_T0004955.1 MGP_CBAJ_G0004230.1 mouse_genomes_project 6 100659178 101033339 + antisense antisense MGP_CBAJ_T0004956.1 MGP_CBAJ_G0004230.1 mouse_genomes_project 6 100659387 100851016 + antisense antisense MGP_CBAJ_T0004957.1 MGP_CBAJ_G0004230.1 mouse_genomes_project 6 100659391 100889934 + antisense antisense MGP_CBAJ_T0004958.1 MGP_CBAJ_G0004230.1 mouse_genomes_project 6 100659391 100851298 + antisense antisense MGP_CBAJ_T0004959.1 MGP_CBAJ_G0004230.1 mouse_genomes_project 6 100659391 101033427 + antisense antisense MGP_CBAJ_T0004875.1 MGP_CBAJ_G0004179.1 mouse_genomes_project 6 54757591 54764479 + Gm29430 antisense antisense MGP_CBAJ_T0004876.1 MGP_CBAJ_G0004179.1 mouse_genomes_project 6 54758230 54764406 + Gm29430 antisense antisense MGP_CBAJ_T0101976.1 MGP_CBAJ_G0040007.1 mouse_genomes_project 6 41863049 41939517 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0076458.1 MGP_CBAJ_G0030232.1 mouse_genomes_project 6 34557635 34570247 + MGP_CBAJ_P0076458 Akr1b10 protein_coding protein_coding MGP_CBAJ_T0076459.1 MGP_CBAJ_G0030232.1 mouse_genomes_project 6 34557666 34562891 + Akr1b10 protein_coding retained_intron MGP_CBAJ_T0076460.1 MGP_CBAJ_G0030232.1 mouse_genomes_project 6 34557698 34570045 + MGP_CBAJ_P0076460 Akr1b10 protein_coding protein_coding MGP_CBAJ_T0076461.1 MGP_CBAJ_G0030232.1 mouse_genomes_project 6 34557698 34570244 + MGP_CBAJ_P0076461 Akr1b10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076462.1 MGP_CBAJ_G0030232.1 mouse_genomes_project 6 34562910 34563879 + Akr1b10 protein_coding retained_intron MGP_CBAJ_T0076463.1 MGP_CBAJ_G0030232.1 mouse_genomes_project 6 34564742 34566267 + Akr1b10 protein_coding retained_intron MGP_CBAJ_T0015328.1 MGP_CBAJ_G0013440.1 mouse_genomes_project 6 125089893 125090326 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099445.1 MGP_CBAJ_G0037700.1 mouse_genomes_project 6 104679592 104679696 - Gm26011 snRNA snRNA MGP_CBAJ_T0015316.1 MGP_CBAJ_G0013428.1 mouse_genomes_project 6 122481718 122482186 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0102015.1 MGP_CBAJ_G0040046.1 mouse_genomes_project 6 97495788 97496026 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0077428.1 MGP_CBAJ_G0030491.1 mouse_genomes_project 6 64869522 66246863 + MGP_CBAJ_P0077428 Ccser1 protein_coding protein_coding MGP_CBAJ_T0077429.1 MGP_CBAJ_G0030491.1 mouse_genomes_project 6 64869735 65035284 + Ccser1 protein_coding retained_intron MGP_CBAJ_T0077430.1 MGP_CBAJ_G0030491.1 mouse_genomes_project 6 64869736 65034915 + Ccser1 protein_coding retained_intron MGP_CBAJ_T0077431.1 MGP_CBAJ_G0030491.1 mouse_genomes_project 6 65033161 66244265 + MGP_CBAJ_P0077431 Ccser1 protein_coding protein_coding MGP_CBAJ_T0077432.1 MGP_CBAJ_G0030491.1 mouse_genomes_project 6 65036107 65313024 + Ccser1 protein_coding retained_intron MGP_CBAJ_T0077433.1 MGP_CBAJ_G0030491.1 mouse_genomes_project 6 65041907 65312786 + Ccser1 protein_coding processed_transcript MGP_CBAJ_T0077434.1 MGP_CBAJ_G0030491.1 mouse_genomes_project 6 65096046 65583086 + MGP_CBAJ_P0077434 Ccser1 protein_coding protein_coding MGP_CBAJ_T0077435.1 MGP_CBAJ_G0030491.1 mouse_genomes_project 6 65096054 65478884 + Ccser1 protein_coding retained_intron MGP_CBAJ_T0077436.1 MGP_CBAJ_G0030491.1 mouse_genomes_project 6 65096089 65200372 + Ccser1 protein_coding processed_transcript MGP_CBAJ_T0077437.1 MGP_CBAJ_G0030491.1 mouse_genomes_project 6 65312687 65591980 + MGP_CBAJ_P0077437 Ccser1 protein_coding protein_coding MGP_CBAJ_T0077438.1 MGP_CBAJ_G0030491.1 mouse_genomes_project 6 65548622 65591519 + Ccser1 protein_coding processed_transcript MGP_CBAJ_T0099448.1 MGP_CBAJ_G0037703.1 mouse_genomes_project 6 111796446 111796554 + Gm26022 snRNA snRNA MGP_CBAJ_T0001979.1 MGP_CBAJ_G0001895.1 mouse_genomes_project 6 78497345 78498303 - TEC TEC MGP_CBAJ_T0001892.1 MGP_CBAJ_G0001808.1 mouse_genomes_project 6 16756758 16758345 - TEC TEC MGP_CBAJ_T0076847.1 MGP_CBAJ_G0030334.1 mouse_genomes_project 6 44071188 44072121 + MGP_CBAJ_P0076847 Olfr450 protein_coding protein_coding MGP_CBAJ_T0080396.1 MGP_CBAJ_G0031117.1 mouse_genomes_project 6 156122187 156183138 + MGP_CBAJ_P0080396 Slco1b2 protein_coding protein_coding MGP_CBAJ_T0080397.1 MGP_CBAJ_G0031117.1 mouse_genomes_project 6 156127071 156182098 + MGP_CBAJ_P0080397 Slco1b2 protein_coding protein_coding MGP_CBAJ_T0080398.1 MGP_CBAJ_G0031117.1 mouse_genomes_project 6 156146000 156150665 + Slco1b2 protein_coding retained_intron MGP_CBAJ_T0080399.1 MGP_CBAJ_G0031117.1 mouse_genomes_project 6 156177739 156182101 + Slco1b2 protein_coding retained_intron MGP_CBAJ_T0080538.1 MGP_CBAJ_G0031143.1 mouse_genomes_project 6 160111127 160148907 - MGP_CBAJ_P0080538 Kras protein_coding protein_coding MGP_CBAJ_T0080539.1 MGP_CBAJ_G0031143.1 mouse_genomes_project 6 160114429 160125327 - Kras protein_coding processed_transcript MGP_CBAJ_T0080540.1 MGP_CBAJ_G0031143.1 mouse_genomes_project 6 160114673 160148907 - MGP_CBAJ_P0080540 Kras protein_coding protein_coding MGP_CBAJ_T0080541.1 MGP_CBAJ_G0031143.1 mouse_genomes_project 6 160114697 160148845 - MGP_CBAJ_P0080541 Kras protein_coding protein_coding MGP_CBAJ_T0080542.1 MGP_CBAJ_G0031143.1 mouse_genomes_project 6 160114749 160148838 - MGP_CBAJ_P0080542 Kras protein_coding nonsense_mediated_decay MGP_CBAJ_T0080543.1 MGP_CBAJ_G0031143.1 mouse_genomes_project 6 160115063 160120039 - Kras protein_coding retained_intron MGP_CBAJ_T0080544.1 MGP_CBAJ_G0031143.1 mouse_genomes_project 6 160141201 160148870 - MGP_CBAJ_P0080544 Kras protein_coding protein_coding MGP_CBAJ_T0098073.1 MGP_CBAJ_G0036346.1 mouse_genomes_project 6 63844004 63844123 + n-R5s162 rRNA rRNA MGP_CBAJ_T0076520.1 MGP_CBAJ_G0030240.1 mouse_genomes_project 6 35161076 35183398 + MGP_CBAJ_P0076520 Stra8 protein_coding protein_coding MGP_CBAJ_T0076521.1 MGP_CBAJ_G0030240.1 mouse_genomes_project 6 35161873 35183396 + MGP_CBAJ_P0076521 Stra8 protein_coding protein_coding MGP_CBAJ_T0076522.1 MGP_CBAJ_G0030240.1 mouse_genomes_project 6 35161917 35177415 + MGP_CBAJ_P0076522 Stra8 protein_coding protein_coding MGP_CBAJ_T0076523.1 MGP_CBAJ_G0030240.1 mouse_genomes_project 6 35161923 35183396 + MGP_CBAJ_P0076523 Stra8 protein_coding protein_coding MGP_CBAJ_T0080694.1 MGP_CBAJ_G0031170.1 mouse_genomes_project 6 164199423 164209376 - MGP_CBAJ_P0080694 Fam60a protein_coding protein_coding MGP_CBAJ_T0080695.1 MGP_CBAJ_G0031170.1 mouse_genomes_project 6 164202391 164223350 - MGP_CBAJ_P0080695 Fam60a protein_coding nonsense_mediated_decay MGP_CBAJ_T0080696.1 MGP_CBAJ_G0031170.1 mouse_genomes_project 6 164206737 164225042 - MGP_CBAJ_P0080696 Fam60a protein_coding protein_coding MGP_CBAJ_T0080697.1 MGP_CBAJ_G0031170.1 mouse_genomes_project 6 164223016 164225070 - Fam60a protein_coding processed_transcript MGP_CBAJ_T0015159.1 MGP_CBAJ_G0013271.1 mouse_genomes_project 6 68988602 68989272 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0075819.1 MGP_CBAJ_G0030111.1 mouse_genomes_project 6 2756612 3121280 + MGP_CBAJ_P0075819 Dync1i1 protein_coding protein_coding MGP_CBAJ_T0075820.1 MGP_CBAJ_G0030111.1 mouse_genomes_project 6 2756736 3121271 + MGP_CBAJ_P0075820 Dync1i1 protein_coding protein_coding MGP_CBAJ_T0075821.1 MGP_CBAJ_G0030111.1 mouse_genomes_project 6 2756764 3121280 + MGP_CBAJ_P0075821 Dync1i1 protein_coding protein_coding MGP_CBAJ_T0075822.1 MGP_CBAJ_G0030111.1 mouse_genomes_project 6 2756785 3121280 + MGP_CBAJ_P0075822 Dync1i1 protein_coding protein_coding MGP_CBAJ_T0075823.1 MGP_CBAJ_G0030111.1 mouse_genomes_project 6 2756791 2798831 + MGP_CBAJ_P0075823 Dync1i1 protein_coding protein_coding MGP_CBAJ_T0075824.1 MGP_CBAJ_G0030111.1 mouse_genomes_project 6 2789199 2816658 + MGP_CBAJ_P0075824 Dync1i1 protein_coding protein_coding MGP_CBAJ_T0075825.1 MGP_CBAJ_G0030111.1 mouse_genomes_project 6 3097431 3121028 + Dync1i1 protein_coding retained_intron MGP_CBAJ_T0002051.1 MGP_CBAJ_G0001967.1 mouse_genomes_project 6 99628760 99630691 + TEC TEC MGP_CBAJ_T0076198.1 MGP_CBAJ_G0030190.1 mouse_genomes_project 6 28771505 28787380 - MGP_CBAJ_P0076198 Impdh1 protein_coding protein_coding MGP_CBAJ_T0076199.1 MGP_CBAJ_G0030190.1 mouse_genomes_project 6 28771508 28783346 - MGP_CBAJ_P0076199 Impdh1 protein_coding protein_coding MGP_CBAJ_T0076200.1 MGP_CBAJ_G0030190.1 mouse_genomes_project 6 28771508 28787413 - MGP_CBAJ_P0076200 Impdh1 protein_coding protein_coding MGP_CBAJ_T0076201.1 MGP_CBAJ_G0030190.1 mouse_genomes_project 6 28771508 28783298 - MGP_CBAJ_P0076201 Impdh1 protein_coding protein_coding MGP_CBAJ_T0076202.1 MGP_CBAJ_G0030190.1 mouse_genomes_project 6 28771509 28787391 - MGP_CBAJ_P0076202 Impdh1 protein_coding protein_coding MGP_CBAJ_T0076203.1 MGP_CBAJ_G0030190.1 mouse_genomes_project 6 28771516 28774490 - MGP_CBAJ_P0076203 Impdh1 protein_coding protein_coding MGP_CBAJ_T0076204.1 MGP_CBAJ_G0030190.1 mouse_genomes_project 6 28775631 28777506 - Impdh1 protein_coding retained_intron MGP_CBAJ_T0076205.1 MGP_CBAJ_G0030190.1 mouse_genomes_project 6 28776176 28787326 - MGP_CBAJ_P0076205 Impdh1 protein_coding protein_coding MGP_CBAJ_T0076206.1 MGP_CBAJ_G0030190.1 mouse_genomes_project 6 28777889 28780673 - Impdh1 protein_coding retained_intron MGP_CBAJ_T0076207.1 MGP_CBAJ_G0030190.1 mouse_genomes_project 6 28778055 28786978 - MGP_CBAJ_P0076207 Impdh1 protein_coding protein_coding MGP_CBAJ_T0008669.1 MGP_CBAJ_G0006993.1 mouse_genomes_project 6 160689564 160697143 - Gm15704 lincRNA lincRNA MGP_CBAJ_T0002002.1 MGP_CBAJ_G0001918.1 mouse_genomes_project 6 89685100 89686567 + TEC TEC MGP_CBAJ_T0008603.1 MGP_CBAJ_G0006944.1 mouse_genomes_project 6 128084204 128087245 - Gm4640 lincRNA lincRNA MGP_CBAJ_T0008657.1 MGP_CBAJ_G0006985.1 mouse_genomes_project 6 157615218 157615656 + lincRNA lincRNA MGP_CBAJ_T0078645.1 MGP_CBAJ_G0030740.1 mouse_genomes_project 6 105391933 105413856 - MGP_CBAJ_P0078645 Uba3 protein_coding protein_coding MGP_CBAJ_T0078646.1 MGP_CBAJ_G0030740.1 mouse_genomes_project 6 105392081 105413855 - MGP_CBAJ_P0078646 Uba3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078647.1 MGP_CBAJ_G0030740.1 mouse_genomes_project 6 105392270 105413943 - MGP_CBAJ_P0078647 Uba3 protein_coding protein_coding MGP_CBAJ_T0078648.1 MGP_CBAJ_G0030740.1 mouse_genomes_project 6 105403567 105405747 - Uba3 protein_coding retained_intron MGP_CBAJ_T0078649.1 MGP_CBAJ_G0030740.1 mouse_genomes_project 6 105411309 105413861 - Uba3 protein_coding retained_intron MGP_CBAJ_T0078650.1 MGP_CBAJ_G0030740.1 mouse_genomes_project 6 105412386 105413864 - Uba3 protein_coding retained_intron MGP_CBAJ_T0015259.1 MGP_CBAJ_G0013371.1 mouse_genomes_project 6 93467902 93468910 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002019.1 MGP_CBAJ_G0001935.1 mouse_genomes_project 6 94455871 94457922 - TEC TEC MGP_CBAJ_T0099462.1 MGP_CBAJ_G0037717.1 mouse_genomes_project 6 141654105 141654168 + Gm26160 snRNA snRNA MGP_CBAJ_T0078828.1 MGP_CBAJ_G0030777.1 mouse_genomes_project 6 123214882 123241426 + MGP_CBAJ_P0078828 Thumpd3 protein_coding protein_coding MGP_CBAJ_T0078829.1 MGP_CBAJ_G0030777.1 mouse_genomes_project 6 123214959 123226478 + MGP_CBAJ_P0078829 Thumpd3 protein_coding protein_coding MGP_CBAJ_T0078830.1 MGP_CBAJ_G0030777.1 mouse_genomes_project 6 123214972 123233950 + Thumpd3 protein_coding retained_intron MGP_CBAJ_T0078831.1 MGP_CBAJ_G0030777.1 mouse_genomes_project 6 123214984 123218200 + Thumpd3 protein_coding retained_intron MGP_CBAJ_T0078832.1 MGP_CBAJ_G0030777.1 mouse_genomes_project 6 123215014 123216676 + Thumpd3 protein_coding retained_intron MGP_CBAJ_T0078833.1 MGP_CBAJ_G0030777.1 mouse_genomes_project 6 123215115 123216336 + MGP_CBAJ_P0078833 Thumpd3 protein_coding protein_coding MGP_CBAJ_T0078834.1 MGP_CBAJ_G0030777.1 mouse_genomes_project 6 123215412 123216362 + MGP_CBAJ_P0078834 Thumpd3 protein_coding protein_coding MGP_CBAJ_T0078835.1 MGP_CBAJ_G0030777.1 mouse_genomes_project 6 123216072 123221804 + Thumpd3 protein_coding processed_transcript MGP_CBAJ_T0078836.1 MGP_CBAJ_G0030777.1 mouse_genomes_project 6 123228504 123234174 + Thumpd3 protein_coding retained_intron MGP_CBAJ_T0078837.1 MGP_CBAJ_G0030777.1 mouse_genomes_project 6 123238578 123241049 + Thumpd3 protein_coding retained_intron MGP_CBAJ_T0015224.1 MGP_CBAJ_G0013336.1 mouse_genomes_project 6 81035514 81036016 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000047.1 MGP_CBAJ_G0000037.1 mouse_genomes_project 6 75891864 75891902 + MGP_CBAJ_P0000047 Igkj4 IG_J_gene IG_J_gene MGP_CBAJ_T0100704.1 MGP_CBAJ_G0038959.1 mouse_genomes_project 6 135754986 135755062 - Gm24843 snoRNA snoRNA MGP_CBAJ_T0005022.1 MGP_CBAJ_G0004281.1 mouse_genomes_project 6 148304538 148307633 + 2810454H06Rik antisense antisense MGP_CBAJ_T0015032.1 MGP_CBAJ_G0013144.1 mouse_genomes_project 6 11700413 11700707 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000301.1 MGP_CBAJ_G0000246.1 mouse_genomes_project 6 75301499 75302065 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0011529.1 MGP_CBAJ_G0009667.1 mouse_genomes_project 6 90497066 90497253 + Gm27772 misc_RNA misc_RNA MGP_CBAJ_T0000188.1 MGP_CBAJ_G0000141.1 mouse_genomes_project 6 74948757 74949319 - MGP_CBAJ_P0000188 Igkv5-37 IG_V_gene IG_V_gene MGP_CBAJ_T0015394.1 MGP_CBAJ_G0013506.1 mouse_genomes_project 6 143254075 143254196 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0078360.1 MGP_CBAJ_G0030677.1 mouse_genomes_project 6 96209560 96215547 - MGP_CBAJ_P0078360 Abtb1 protein_coding protein_coding MGP_CBAJ_T0078361.1 MGP_CBAJ_G0030677.1 mouse_genomes_project 6 96209570 96215541 - MGP_CBAJ_P0078361 Abtb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078362.1 MGP_CBAJ_G0030677.1 mouse_genomes_project 6 96209794 96215631 - MGP_CBAJ_P0078362 Abtb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078363.1 MGP_CBAJ_G0030677.1 mouse_genomes_project 6 96209924 96212362 - Abtb1 protein_coding retained_intron MGP_CBAJ_T0078364.1 MGP_CBAJ_G0030677.1 mouse_genomes_project 6 96210069 96212513 - MGP_CBAJ_P0078364 Abtb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078365.1 MGP_CBAJ_G0030677.1 mouse_genomes_project 6 96210331 96212727 - MGP_CBAJ_P0078365 Abtb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078366.1 MGP_CBAJ_G0030677.1 mouse_genomes_project 6 96211761 96212802 - MGP_CBAJ_P0078366 Abtb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078367.1 MGP_CBAJ_G0030677.1 mouse_genomes_project 6 96212100 96215513 - MGP_CBAJ_P0078367 Abtb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078368.1 MGP_CBAJ_G0030677.1 mouse_genomes_project 6 96212303 96213236 - Abtb1 protein_coding retained_intron MGP_CBAJ_T0078369.1 MGP_CBAJ_G0030677.1 mouse_genomes_project 6 96212491 96215529 - MGP_CBAJ_P0078369 Abtb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078370.1 MGP_CBAJ_G0030677.1 mouse_genomes_project 6 96212664 96215477 - Abtb1 protein_coding retained_intron MGP_CBAJ_T0078371.1 MGP_CBAJ_G0030677.1 mouse_genomes_project 6 96213311 96215582 - MGP_CBAJ_P0078371 Abtb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076512.1 MGP_CBAJ_G0030239.1 mouse_genomes_project 6 35119619 35149981 - MGP_CBAJ_P0076512 Wdr91 protein_coding protein_coding MGP_CBAJ_T0076513.1 MGP_CBAJ_G0030239.1 mouse_genomes_project 6 35119619 35149981 - MGP_CBAJ_P0076513 Wdr91 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076514.1 MGP_CBAJ_G0030239.1 mouse_genomes_project 6 35143771 35149700 - MGP_CBAJ_P0076514 Wdr91 protein_coding protein_coding MGP_CBAJ_T0076515.1 MGP_CBAJ_G0030239.1 mouse_genomes_project 6 35145767 35149767 - MGP_CBAJ_P0076515 Wdr91 protein_coding protein_coding MGP_CBAJ_T0076516.1 MGP_CBAJ_G0030239.1 mouse_genomes_project 6 35147399 35149668 - MGP_CBAJ_P0076516 Wdr91 protein_coding protein_coding MGP_CBAJ_T0076517.1 MGP_CBAJ_G0030239.1 mouse_genomes_project 6 35147651 35149938 - Wdr91 protein_coding retained_intron MGP_CBAJ_T0076518.1 MGP_CBAJ_G0030239.1 mouse_genomes_project 6 35148551 35149941 - Wdr91 protein_coding processed_transcript MGP_CBAJ_T0076519.1 MGP_CBAJ_G0030239.1 mouse_genomes_project 6 35148565 35149947 - Wdr91 protein_coding processed_transcript MGP_CBAJ_T0077103.1 MGP_CBAJ_G0030398.1 mouse_genomes_project 6 52629593 52726197 - MGP_CBAJ_P0077103 Osbpl3 protein_coding protein_coding MGP_CBAJ_T0077104.1 MGP_CBAJ_G0030398.1 mouse_genomes_project 6 52631446 52636612 - Osbpl3 protein_coding retained_intron MGP_CBAJ_T0077105.1 MGP_CBAJ_G0030398.1 mouse_genomes_project 6 52631950 52710289 - MGP_CBAJ_P0077105 Osbpl3 protein_coding protein_coding MGP_CBAJ_T0077106.1 MGP_CBAJ_G0030398.1 mouse_genomes_project 6 52633062 52813482 - MGP_CBAJ_P0077106 Osbpl3 protein_coding protein_coding MGP_CBAJ_T0077107.1 MGP_CBAJ_G0030398.1 mouse_genomes_project 6 52633068 52710392 - MGP_CBAJ_P0077107 Osbpl3 protein_coding protein_coding MGP_CBAJ_T0077108.1 MGP_CBAJ_G0030398.1 mouse_genomes_project 6 52636471 52726197 - Osbpl3 protein_coding retained_intron MGP_CBAJ_T0077109.1 MGP_CBAJ_G0030398.1 mouse_genomes_project 6 52665890 52692063 - MGP_CBAJ_P0077109 Osbpl3 protein_coding protein_coding MGP_CBAJ_T0077110.1 MGP_CBAJ_G0030398.1 mouse_genomes_project 6 52688192 52813473 - MGP_CBAJ_P0077110 Osbpl3 protein_coding protein_coding MGP_CBAJ_T0077111.1 MGP_CBAJ_G0030398.1 mouse_genomes_project 6 52692925 52745493 - MGP_CBAJ_P0077111 Osbpl3 protein_coding protein_coding MGP_CBAJ_T0077112.1 MGP_CBAJ_G0030398.1 mouse_genomes_project 6 52759803 52813513 - Osbpl3 protein_coding processed_transcript MGP_CBAJ_T0077346.1 MGP_CBAJ_G0030453.1 mouse_genomes_project 6 60117600 60118656 + MGP_CBAJ_P0077346 Vmn1r5 protein_coding protein_coding MGP_CBAJ_T0017976.1 MGP_CBAJ_G0015367.1 mouse_genomes_project 6 31125682 31246092 + 2210408F21Rik processed_transcript lincRNA MGP_CBAJ_T0017977.1 MGP_CBAJ_G0015367.1 mouse_genomes_project 6 31125682 31245935 + 2210408F21Rik processed_transcript lincRNA MGP_CBAJ_T0017978.1 MGP_CBAJ_G0015367.1 mouse_genomes_project 6 31125682 31246061 + 2210408F21Rik processed_transcript lincRNA MGP_CBAJ_T0017979.1 MGP_CBAJ_G0015367.1 mouse_genomes_project 6 31125688 31246080 + 2210408F21Rik processed_transcript lincRNA MGP_CBAJ_T0017980.1 MGP_CBAJ_G0015367.1 mouse_genomes_project 6 31125736 31246065 + 2210408F21Rik processed_transcript lincRNA MGP_CBAJ_T0017981.1 MGP_CBAJ_G0015367.1 mouse_genomes_project 6 31125736 31246073 + 2210408F21Rik processed_transcript lincRNA MGP_CBAJ_T0017982.1 MGP_CBAJ_G0015367.1 mouse_genomes_project 6 31125753 31236725 + 2210408F21Rik processed_transcript lincRNA MGP_CBAJ_T0017983.1 MGP_CBAJ_G0015367.1 mouse_genomes_project 6 31125753 31245998 + 2210408F21Rik processed_transcript lincRNA MGP_CBAJ_T0017984.1 MGP_CBAJ_G0015367.1 mouse_genomes_project 6 31125766 31246085 + 2210408F21Rik processed_transcript lincRNA MGP_CBAJ_T0017985.1 MGP_CBAJ_G0015367.1 mouse_genomes_project 6 31125772 31246061 + 2210408F21Rik processed_transcript lincRNA MGP_CBAJ_T0017986.1 MGP_CBAJ_G0015367.1 mouse_genomes_project 6 31125778 31246088 + 2210408F21Rik processed_transcript lincRNA MGP_CBAJ_T0017987.1 MGP_CBAJ_G0015367.1 mouse_genomes_project 6 31186324 31201666 + 2210408F21Rik processed_transcript lincRNA MGP_CBAJ_T0017988.1 MGP_CBAJ_G0015367.1 mouse_genomes_project 6 31193478 31246091 + 2210408F21Rik processed_transcript lincRNA MGP_CBAJ_T0017989.1 MGP_CBAJ_G0015367.1 mouse_genomes_project 6 31200979 31202112 + 2210408F21Rik processed_transcript TEC MGP_CBAJ_T0017990.1 MGP_CBAJ_G0015367.1 mouse_genomes_project 6 31230407 31246073 + 2210408F21Rik processed_transcript lincRNA MGP_CBAJ_T0098214.1 MGP_CBAJ_G0036487.1 mouse_genomes_project 6 136886700 136886836 + Gm23751 scaRNA scaRNA MGP_CBAJ_T0076924.1 MGP_CBAJ_G0030358.1 mouse_genomes_project 6 49908364 49920342 + MGP_CBAJ_P0076924 Zfp956 protein_coding protein_coding MGP_CBAJ_T0076925.1 MGP_CBAJ_G0030358.1 mouse_genomes_project 6 49908419 49911240 + Zfp956 protein_coding retained_intron MGP_CBAJ_T0076926.1 MGP_CBAJ_G0030358.1 mouse_genomes_project 6 49908421 49920339 + MGP_CBAJ_P0076926 Zfp956 protein_coding nonsense_mediated_decay MGP_CBAJ_T0015355.1 MGP_CBAJ_G0013467.1 mouse_genomes_project 6 133822690 133822984 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0078574.1 MGP_CBAJ_G0030723.1 mouse_genomes_project 6 99813986 99844652 - MGP_CBAJ_P0078574 Rbsn protein_coding protein_coding MGP_CBAJ_T0078575.1 MGP_CBAJ_G0030723.1 mouse_genomes_project 6 99817115 99826915 - MGP_CBAJ_P0078575 Rbsn protein_coding protein_coding MGP_CBAJ_T0078576.1 MGP_CBAJ_G0030723.1 mouse_genomes_project 6 99817657 99828818 - Rbsn protein_coding processed_transcript MGP_CBAJ_T0078577.1 MGP_CBAJ_G0030723.1 mouse_genomes_project 6 99818020 99821403 - Rbsn protein_coding retained_intron MGP_CBAJ_T0078578.1 MGP_CBAJ_G0030723.1 mouse_genomes_project 6 99834346 99844576 - MGP_CBAJ_P0078578 Rbsn protein_coding protein_coding MGP_CBAJ_T0078579.1 MGP_CBAJ_G0030723.1 mouse_genomes_project 6 99838750 99844296 - MGP_CBAJ_P0078579 Rbsn protein_coding protein_coding MGP_CBAJ_T0000174.1 MGP_CBAJ_G0000131.1 mouse_genomes_project 6 73588024 73588504 - MGP_CBAJ_P0000174 Gm42543 IG_V_gene IG_V_gene MGP_CBAJ_T0015260.1 MGP_CBAJ_G0013372.1 mouse_genomes_project 6 95260367 95260781 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0078189.1 MGP_CBAJ_G0030644.1 mouse_genomes_project 6 93914159 93926358 - MGP_CBAJ_P0078189 Snrnp27 protein_coding protein_coding MGP_CBAJ_T0078190.1 MGP_CBAJ_G0030644.1 mouse_genomes_project 6 93914413 93926327 - Snrnp27 protein_coding processed_transcript MGP_CBAJ_T0078191.1 MGP_CBAJ_G0030644.1 mouse_genomes_project 6 93914680 93926358 - MGP_CBAJ_P0078191 Snrnp27 protein_coding protein_coding MGP_CBAJ_T0078192.1 MGP_CBAJ_G0030644.1 mouse_genomes_project 6 93924512 93926353 - Snrnp27 protein_coding processed_transcript MGP_CBAJ_T0002144.1 MGP_CBAJ_G0002059.1 mouse_genomes_project 6 161782434 161783660 + TEC TEC MGP_CBAJ_T0080138.1 MGP_CBAJ_G0031066.1 mouse_genomes_project 6 147737460 147785691 + MGP_CBAJ_P0080138 Bcl2l14 protein_coding protein_coding MGP_CBAJ_T0080139.1 MGP_CBAJ_G0031066.1 mouse_genomes_project 6 147737487 147744511 + Bcl2l14 protein_coding processed_transcript MGP_CBAJ_T0080140.1 MGP_CBAJ_G0031066.1 mouse_genomes_project 6 147739796 147785679 + MGP_CBAJ_P0080140 Bcl2l14 protein_coding protein_coding MGP_CBAJ_T0080141.1 MGP_CBAJ_G0031066.1 mouse_genomes_project 6 147739808 147767925 + MGP_CBAJ_P0080141 Bcl2l14 protein_coding protein_coding MGP_CBAJ_T0080142.1 MGP_CBAJ_G0031066.1 mouse_genomes_project 6 147755614 147785070 + MGP_CBAJ_P0080142 Bcl2l14 protein_coding protein_coding MGP_CBAJ_T0080143.1 MGP_CBAJ_G0031066.1 mouse_genomes_project 6 147755651 147775452 + Bcl2l14 protein_coding retained_intron MGP_CBAJ_T0015192.1 MGP_CBAJ_G0013304.1 mouse_genomes_project 6 72014709 72015965 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099451.1 MGP_CBAJ_G0037706.1 mouse_genomes_project 6 122615291 122615394 + Gm27944 snRNA snRNA MGP_CBAJ_T0100667.1 MGP_CBAJ_G0038922.1 mouse_genomes_project 6 57880106 57880235 + Gm24230 snoRNA snoRNA MGP_CBAJ_T0001870.1 MGP_CBAJ_G0001786.1 mouse_genomes_project 6 1293264 1293989 - TEC TEC MGP_CBAJ_T0002059.1 MGP_CBAJ_G0001975.1 mouse_genomes_project 6 105838249 105839915 - TEC TEC MGP_CBAJ_T0080061.1 MGP_CBAJ_G0031020.1 mouse_genomes_project 6 142249824 142273580 - MGP_CBAJ_P0080061 Klri1 protein_coding protein_coding MGP_CBAJ_T0015209.1 MGP_CBAJ_G0013321.1 mouse_genomes_project 6 75390377 75391722 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101970.1 MGP_CBAJ_G0040001.1 mouse_genomes_project 6 13620 22644 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0078709.1 MGP_CBAJ_G0030748.1 mouse_genomes_project 6 108145612 108187286 - MGP_CBAJ_P0078709 Eif4e3 protein_coding protein_coding MGP_CBAJ_T0097827.1 MGP_CBAJ_G0036100.1 mouse_genomes_project 6 54806721 54809018 - pseudogene pseudogene MGP_CBAJ_T0015398.1 MGP_CBAJ_G0013510.1 mouse_genomes_project 6 144573639 144573752 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002057.1 MGP_CBAJ_G0001973.1 mouse_genomes_project 6 102770274 102771278 + TEC TEC MGP_CBAJ_T0004938.1 MGP_CBAJ_G0004218.1 mouse_genomes_project 6 95216955 95222557 - Gm26636 antisense antisense MGP_CBAJ_T0078263.1 MGP_CBAJ_G0030660.1 mouse_genomes_project 6 95078601 95080298 + MGP_CBAJ_P0078263 Gp9 protein_coding protein_coding MGP_CBAJ_T0015145.1 MGP_CBAJ_G0013257.1 mouse_genomes_project 6 62455478 62457912 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004984.1 MGP_CBAJ_G0004247.1 mouse_genomes_project 6 124210200 124212668 + Gm15082 antisense antisense MGP_CBAJ_T0079584.1 MGP_CBAJ_G0030919.1 mouse_genomes_project 6 136322004 136336117 - MGP_CBAJ_P0079584 C1s2 protein_coding protein_coding MGP_CBAJ_T0015381.1 MGP_CBAJ_G0013493.1 mouse_genomes_project 6 140536036 140536433 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004975.1 MGP_CBAJ_G0004241.1 mouse_genomes_project 6 123240580 123250399 - antisense antisense MGP_CBAJ_T0004976.1 MGP_CBAJ_G0004241.1 mouse_genomes_project 6 123240811 123250385 - antisense antisense MGP_CBAJ_T0004977.1 MGP_CBAJ_G0004241.1 mouse_genomes_project 6 123243550 123250418 - antisense antisense MGP_CBAJ_T0004978.1 MGP_CBAJ_G0004241.1 mouse_genomes_project 6 123243926 123250541 - antisense antisense MGP_CBAJ_T0080573.1 MGP_CBAJ_G0031150.1 mouse_genomes_project 6 161550291 161555318 - MGP_CBAJ_P0080573 Asun protein_coding protein_coding MGP_CBAJ_T0080574.1 MGP_CBAJ_G0031150.1 mouse_genomes_project 6 161550291 161558003 - MGP_CBAJ_P0080574 Asun protein_coding protein_coding MGP_CBAJ_T0080575.1 MGP_CBAJ_G0031150.1 mouse_genomes_project 6 161550291 161583395 - MGP_CBAJ_P0080575 Asun protein_coding protein_coding MGP_CBAJ_T0080576.1 MGP_CBAJ_G0031150.1 mouse_genomes_project 6 161550300 161552039 - Asun protein_coding retained_intron MGP_CBAJ_T0080577.1 MGP_CBAJ_G0031150.1 mouse_genomes_project 6 161550590 161551061 - Asun protein_coding retained_intron MGP_CBAJ_T0080578.1 MGP_CBAJ_G0031150.1 mouse_genomes_project 6 161550753 161554718 - Asun protein_coding retained_intron MGP_CBAJ_T0080579.1 MGP_CBAJ_G0031150.1 mouse_genomes_project 6 161553165 161556915 - Asun protein_coding processed_transcript MGP_CBAJ_T0080580.1 MGP_CBAJ_G0031150.1 mouse_genomes_project 6 161554764 161555487 - Asun protein_coding retained_intron MGP_CBAJ_T0080581.1 MGP_CBAJ_G0031150.1 mouse_genomes_project 6 161555678 161581823 - MGP_CBAJ_P0080581 Asun protein_coding protein_coding MGP_CBAJ_T0080582.1 MGP_CBAJ_G0031150.1 mouse_genomes_project 6 161564033 161567366 - Asun protein_coding retained_intron MGP_CBAJ_T0080583.1 MGP_CBAJ_G0031150.1 mouse_genomes_project 6 161578726 161583340 - Asun protein_coding retained_intron MGP_CBAJ_T0015371.1 MGP_CBAJ_G0013483.1 mouse_genomes_project 6 138942458 138943358 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000279.1 MGP_CBAJ_G0000224.1 mouse_genomes_project 6 73415381 73416073 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0010641.1 MGP_CBAJ_G0008779.1 mouse_genomes_project 6 50491984 50492058 + Gm24325 miRNA miRNA MGP_CBAJ_T0005046.1 MGP_CBAJ_G0004302.1 mouse_genomes_project 6 162031827 162033385 - Gm44085 antisense antisense MGP_CBAJ_T0077967.1 MGP_CBAJ_G0030606.1 mouse_genomes_project 6 90567008 90576468 - MGP_CBAJ_P0077967 Tex261 protein_coding protein_coding MGP_CBAJ_T0077968.1 MGP_CBAJ_G0030606.1 mouse_genomes_project 6 90568529 90576445 - Tex261 protein_coding retained_intron MGP_CBAJ_T0077969.1 MGP_CBAJ_G0030606.1 mouse_genomes_project 6 90569300 90570589 - Tex261 protein_coding retained_intron MGP_CBAJ_T0077970.1 MGP_CBAJ_G0030606.1 mouse_genomes_project 6 90571720 90576413 - Tex261 protein_coding retained_intron MGP_CBAJ_T0015297.1 MGP_CBAJ_G0013409.1 mouse_genomes_project 6 112266655 112267092 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015131.1 MGP_CBAJ_G0013243.1 mouse_genomes_project 6 55380614 55380915 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002005.1 MGP_CBAJ_G0001921.1 mouse_genomes_project 6 90149862 90153337 - TEC TEC MGP_CBAJ_T0100649.1 MGP_CBAJ_G0038904.1 mouse_genomes_project 6 10813981 10814110 + Gm24985 snoRNA snoRNA MGP_CBAJ_T0010649.1 MGP_CBAJ_G0008787.1 mouse_genomes_project 6 75008406 75008516 - Gm23694 miRNA miRNA MGP_CBAJ_T0076028.1 MGP_CBAJ_G0030149.1 mouse_genomes_project 6 16462615 16641956 + MGP_CBAJ_P0076028 Cftr protein_coding nonsense_mediated_decay MGP_CBAJ_T0076029.1 MGP_CBAJ_G0030149.1 mouse_genomes_project 6 16462615 16641957 + MGP_CBAJ_P0076029 Cftr protein_coding protein_coding MGP_CBAJ_T0076030.1 MGP_CBAJ_G0030149.1 mouse_genomes_project 6 16462615 16641956 + MGP_CBAJ_P0076030 Cftr protein_coding nonsense_mediated_decay MGP_CBAJ_T0076031.1 MGP_CBAJ_G0030149.1 mouse_genomes_project 6 16462699 16543119 + MGP_CBAJ_P0076031 Cftr protein_coding protein_coding MGP_CBAJ_T0076032.1 MGP_CBAJ_G0030149.1 mouse_genomes_project 6 16462752 16640222 + MGP_CBAJ_P0076032 Cftr protein_coding protein_coding MGP_CBAJ_T0076033.1 MGP_CBAJ_G0030149.1 mouse_genomes_project 6 16565273 16577753 + Cftr protein_coding retained_intron MGP_CBAJ_T0099446.1 MGP_CBAJ_G0037701.1 mouse_genomes_project 6 105830867 105831030 - Gm23510 snRNA snRNA MGP_CBAJ_T0077467.1 MGP_CBAJ_G0030497.1 mouse_genomes_project 6 69744210 69856029 + MGP_CBAJ_P0077467 Tnip3 protein_coding unknown_likely_coding MGP_CBAJ_T0077468.1 MGP_CBAJ_G0030497.1 mouse_genomes_project 6 69808359 69858961 + MGP_CBAJ_P0077468 Tnip3 protein_coding protein_coding MGP_CBAJ_T0077469.1 MGP_CBAJ_G0030497.1 mouse_genomes_project 6 69808377 69818136 + Tnip3 protein_coding retained_intron MGP_CBAJ_T0077470.1 MGP_CBAJ_G0030497.1 mouse_genomes_project 6 69808389 69809623 + Tnip3 protein_coding processed_transcript MGP_CBAJ_T0077471.1 MGP_CBAJ_G0030497.1 mouse_genomes_project 6 69808420 69811662 + Tnip3 protein_coding retained_intron MGP_CBAJ_T0077472.1 MGP_CBAJ_G0030497.1 mouse_genomes_project 6 69808448 69813075 + Tnip3 protein_coding retained_intron MGP_CBAJ_T0077473.1 MGP_CBAJ_G0030497.1 mouse_genomes_project 6 69815535 69818159 + Tnip3 protein_coding retained_intron MGP_CBAJ_T0078632.1 MGP_CBAJ_G0030737.1 mouse_genomes_project 6 104971452 105241662 - MGP_CBAJ_P0078632 Fam19a4 protein_coding protein_coding MGP_CBAJ_T0078633.1 MGP_CBAJ_G0030737.1 mouse_genomes_project 6 105237876 105241642 - Fam19a4 protein_coding retained_intron MGP_CBAJ_T0080425.1 MGP_CBAJ_G0031126.1 mouse_genomes_project 6 156917369 156957172 - MGP_CBAJ_P0080425 Recql protein_coding protein_coding MGP_CBAJ_T0080427.1 MGP_CBAJ_G0031126.1 mouse_genomes_project 6 156925618 156957210 - MGP_CBAJ_P0080427 Recql protein_coding protein_coding MGP_CBAJ_T0080428.1 MGP_CBAJ_G0031126.1 mouse_genomes_project 6 156925622 156937341 - MGP_CBAJ_P0080428 Recql protein_coding protein_coding MGP_CBAJ_T0080429.1 MGP_CBAJ_G0031126.1 mouse_genomes_project 6 156926531 156932334 - Recql protein_coding processed_transcript MGP_CBAJ_T0080430.1 MGP_CBAJ_G0031126.1 mouse_genomes_project 6 156930047 156957223 - MGP_CBAJ_P0080430 Recql protein_coding protein_coding MGP_CBAJ_T0080431.1 MGP_CBAJ_G0031126.1 mouse_genomes_project 6 156930792 156932246 - MGP_CBAJ_P0080431 Recql protein_coding protein_coding MGP_CBAJ_T0080432.1 MGP_CBAJ_G0031126.1 mouse_genomes_project 6 156935172 156939116 - Recql protein_coding processed_transcript MGP_CBAJ_T0080433.1 MGP_CBAJ_G0031126.1 mouse_genomes_project 6 156937870 156938282 - Recql protein_coding retained_intron MGP_CBAJ_T0080434.1 MGP_CBAJ_G0031126.1 mouse_genomes_project 6 156945371 156957145 - MGP_CBAJ_P0080434 Recql protein_coding protein_coding MGP_CBAJ_T0080435.1 MGP_CBAJ_G0031126.1 mouse_genomes_project 6 156945371 156957110 - MGP_CBAJ_P0080435 Recql protein_coding protein_coding MGP_CBAJ_T0080436.1 MGP_CBAJ_G0031126.1 mouse_genomes_project 6 156947470 156957218 - MGP_CBAJ_P0080436 Recql protein_coding protein_coding MGP_CBAJ_T0076465.1 MGP_CBAJ_G0030234.1 mouse_genomes_project 6 34659521 34691211 + MGP_CBAJ_P0076465 Bpgm protein_coding protein_coding MGP_CBAJ_T0076466.1 MGP_CBAJ_G0030234.1 mouse_genomes_project 6 34659670 34672386 + Bpgm protein_coding retained_intron MGP_CBAJ_T0076467.1 MGP_CBAJ_G0030234.1 mouse_genomes_project 6 34659766 34670990 + MGP_CBAJ_P0076467 Bpgm protein_coding protein_coding MGP_CBAJ_T0076468.1 MGP_CBAJ_G0030234.1 mouse_genomes_project 6 34659793 34671050 + MGP_CBAJ_P0076468 Bpgm protein_coding protein_coding MGP_CBAJ_T0076469.1 MGP_CBAJ_G0030234.1 mouse_genomes_project 6 34660456 34671151 + MGP_CBAJ_P0076469 Bpgm protein_coding protein_coding MGP_CBAJ_T0008431.1 MGP_CBAJ_G0006817.1 mouse_genomes_project 6 30990706 30991010 - Gm13834 lincRNA lincRNA MGP_CBAJ_T0002045.1 MGP_CBAJ_G0001961.1 mouse_genomes_project 6 99264740 99265766 - TEC TEC MGP_CBAJ_T0015077.1 MGP_CBAJ_G0013189.1 mouse_genomes_project 6 38244838 38245795 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002615.1 MGP_CBAJ_G0002503.1 mouse_genomes_project 6 42157715 42158187 + MGP_CBAJ_P0002615 Trbv5 TR_V_gene TR_V_gene MGP_CBAJ_T0015126.1 MGP_CBAJ_G0013238.1 mouse_genomes_project 6 53133111 53134237 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005041.1 MGP_CBAJ_G0004297.1 mouse_genomes_project 6 159916233 159919107 + Gm26666 antisense antisense MGP_CBAJ_T0011536.1 MGP_CBAJ_G0009674.1 mouse_genomes_project 6 118011440 118011794 + Gm27813 misc_RNA misc_RNA MGP_CBAJ_T0015343.1 MGP_CBAJ_G0013455.1 mouse_genomes_project 6 130850011 130850895 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015322.1 MGP_CBAJ_G0013434.1 mouse_genomes_project 6 123660481 123660890 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0076676.1 MGP_CBAJ_G0030273.1 mouse_genomes_project 6 40463302 40477955 + MGP_CBAJ_P0076676 Adck2 protein_coding protein_coding MGP_CBAJ_T0076677.1 MGP_CBAJ_G0030273.1 mouse_genomes_project 6 40463388 40473249 + MGP_CBAJ_P0076677 Adck2 protein_coding protein_coding MGP_CBAJ_T0076678.1 MGP_CBAJ_G0030273.1 mouse_genomes_project 6 40463393 40476938 + MGP_CBAJ_P0076678 Adck2 protein_coding protein_coding MGP_CBAJ_T0076679.1 MGP_CBAJ_G0030273.1 mouse_genomes_project 6 40464413 40469382 + Adck2 protein_coding retained_intron MGP_CBAJ_T0076680.1 MGP_CBAJ_G0030273.1 mouse_genomes_project 6 40465804 40471436 + MGP_CBAJ_P0076680 Adck2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076681.1 MGP_CBAJ_G0030273.1 mouse_genomes_project 6 40473131 40475124 + Adck2 protein_coding retained_intron MGP_CBAJ_T0079076.1 MGP_CBAJ_G0030818.1 mouse_genomes_project 6 126015365 126033968 - Raf1 protein_coding retained_intron MGP_CBAJ_T0079077.1 MGP_CBAJ_G0030818.1 mouse_genomes_project 6 126015867 126086320 - MGP_CBAJ_P0079077 Raf1 protein_coding protein_coding MGP_CBAJ_T0079078.1 MGP_CBAJ_G0030818.1 mouse_genomes_project 6 126015867 126086992 - MGP_CBAJ_P0079078 Raf1 protein_coding protein_coding MGP_CBAJ_T0079079.1 MGP_CBAJ_G0030818.1 mouse_genomes_project 6 126015895 126019126 - MGP_CBAJ_P0079079 Raf1 protein_coding protein_coding MGP_CBAJ_T0079080.1 MGP_CBAJ_G0030818.1 mouse_genomes_project 6 126016539 126017619 - Raf1 protein_coding retained_intron MGP_CBAJ_T0079081.1 MGP_CBAJ_G0030818.1 mouse_genomes_project 6 126016894 126020851 - MGP_CBAJ_P0079081 Raf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079082.1 MGP_CBAJ_G0030818.1 mouse_genomes_project 6 126017565 126029979 - Raf1 protein_coding retained_intron MGP_CBAJ_T0079083.1 MGP_CBAJ_G0030818.1 mouse_genomes_project 6 126019116 126026296 - Raf1 protein_coding retained_intron MGP_CBAJ_T0079084.1 MGP_CBAJ_G0030818.1 mouse_genomes_project 6 126019126 126026334 - Raf1 protein_coding retained_intron MGP_CBAJ_T0079085.1 MGP_CBAJ_G0030818.1 mouse_genomes_project 6 126020829 126032248 - MGP_CBAJ_P0079085 Raf1 protein_coding protein_coding MGP_CBAJ_T0079086.1 MGP_CBAJ_G0030818.1 mouse_genomes_project 6 126029452 126086992 - Raf1 protein_coding retained_intron MGP_CBAJ_T0001918.1 MGP_CBAJ_G0001834.1 mouse_genomes_project 6 41227955 41230782 + TEC TEC MGP_CBAJ_T0000147.1 MGP_CBAJ_G0000112.1 mouse_genomes_project 6 72611676 72612447 + MGP_CBAJ_P0000147 Igkv1-122 IG_V_gene IG_V_gene MGP_CBAJ_T0001963.1 MGP_CBAJ_G0001879.1 mouse_genomes_project 6 76088133 76090582 - TEC TEC MGP_CBAJ_T0008627.1 MGP_CBAJ_G0006966.1 mouse_genomes_project 6 140359768 140374729 - 9330102E08Rik lincRNA lincRNA MGP_CBAJ_T0080150.1 MGP_CBAJ_G0031068.1 mouse_genomes_project 6 147980659 148008218 - MGP_CBAJ_P0080150 Mansc1 protein_coding protein_coding MGP_CBAJ_T0011505.1 MGP_CBAJ_G0009643.1 mouse_genomes_project 6 17788641 17788899 - Gm24213 misc_RNA misc_RNA MGP_CBAJ_T0010639.1 MGP_CBAJ_G0008777.1 mouse_genomes_project 6 49747417 49747494 - Mir704 miRNA miRNA MGP_CBAJ_T0076146.1 MGP_CBAJ_G0030179.1 mouse_genomes_project 6 26623216 27587820 - MGP_CBAJ_P0076146 Grm8 protein_coding protein_coding MGP_CBAJ_T0076147.1 MGP_CBAJ_G0030179.1 mouse_genomes_project 6 26623225 27579400 - MGP_CBAJ_P0076147 Grm8 protein_coding protein_coding MGP_CBAJ_T0076148.1 MGP_CBAJ_G0030179.1 mouse_genomes_project 6 26623709 27579470 - MGP_CBAJ_P0076148 Grm8 protein_coding protein_coding MGP_CBAJ_T0076149.1 MGP_CBAJ_G0030179.1 mouse_genomes_project 6 27154347 27586600 - MGP_CBAJ_P0076149 Grm8 protein_coding protein_coding MGP_CBAJ_T0076150.1 MGP_CBAJ_G0030179.1 mouse_genomes_project 6 27368103 27588453 - Grm8 protein_coding processed_transcript MGP_CBAJ_T0076151.1 MGP_CBAJ_G0030179.1 mouse_genomes_project 6 27579338 27586404 - MGP_CBAJ_P0076151 Grm8 protein_coding protein_coding MGP_CBAJ_T0076152.1 MGP_CBAJ_G0030179.1 mouse_genomes_project 6 27585302 27587660 - Grm8 protein_coding processed_transcript MGP_CBAJ_T0075837.1 MGP_CBAJ_G0030115.1 mouse_genomes_project 6 4027142 4031417 - MGP_CBAJ_P0075837 Dlx5 protein_coding protein_coding MGP_CBAJ_T0075838.1 MGP_CBAJ_G0030115.1 mouse_genomes_project 6 4027142 4031400 - MGP_CBAJ_P0075838 Dlx5 protein_coding protein_coding MGP_CBAJ_T0075839.1 MGP_CBAJ_G0030115.1 mouse_genomes_project 6 4030022 4031414 - Dlx5 protein_coding retained_intron MGP_CBAJ_T0008536.1 MGP_CBAJ_G0006894.1 mouse_genomes_project 6 88588951 88596329 + lincRNA lincRNA MGP_CBAJ_T0008538.1 MGP_CBAJ_G0006894.1 mouse_genomes_project 6 88595376 88596949 + lincRNA lincRNA MGP_CBAJ_T0000303.1 MGP_CBAJ_G0000248.1 mouse_genomes_project 6 75576251 75576844 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0004900.1 MGP_CBAJ_G0004198.1 mouse_genomes_project 6 78652225 78660467 + Gm44031 antisense antisense MGP_CBAJ_T0101973.1 MGP_CBAJ_G0040004.1 mouse_genomes_project 6 34547745 34554207 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0002119.1 MGP_CBAJ_G0002034.1 mouse_genomes_project 6 147390564 147392393 + TEC TEC MGP_CBAJ_T0075750.1 MGP_CBAJ_G0030098.1 mouse_genomes_project 6 778326 781969 + MGP_CBAJ_P0075750 Gngt1 protein_coding protein_coding MGP_CBAJ_T0075751.1 MGP_CBAJ_G0030098.1 mouse_genomes_project 6 778331 781435 + Gngt1 protein_coding retained_intron MGP_CBAJ_T0008639.1 MGP_CBAJ_G0006973.1 mouse_genomes_project 6 144987549 144990017 + lincRNA lincRNA MGP_CBAJ_T0015008.1 MGP_CBAJ_G0013120.1 mouse_genomes_project 6 1401176 1404169 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015038.1 MGP_CBAJ_G0013150.1 mouse_genomes_project 6 14299122 14299734 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008553.1 MGP_CBAJ_G0006905.1 mouse_genomes_project 6 93929612 93930217 - Gm44214 lincRNA lincRNA MGP_CBAJ_T0000263.1 MGP_CBAJ_G0000208.1 mouse_genomes_project 6 72668685 72669151 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0077323.1 MGP_CBAJ_G0030448.1 mouse_genomes_project 6 59803841 59805255 + Avl9 protein_coding retained_intron MGP_CBAJ_T0077324.1 MGP_CBAJ_G0030448.1 mouse_genomes_project 6 59803869 59854741 + MGP_CBAJ_P0077324 Avl9 protein_coding protein_coding MGP_CBAJ_T0077325.1 MGP_CBAJ_G0030448.1 mouse_genomes_project 6 59803880 59827437 + MGP_CBAJ_P0077325 Avl9 protein_coding protein_coding MGP_CBAJ_T0077326.1 MGP_CBAJ_G0030448.1 mouse_genomes_project 6 59803884 59817530 + MGP_CBAJ_P0077326 Avl9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077327.1 MGP_CBAJ_G0030448.1 mouse_genomes_project 6 59831192 59842165 + Avl9 protein_coding retained_intron MGP_CBAJ_T0001945.1 MGP_CBAJ_G0001861.1 mouse_genomes_project 6 51439975 51441414 + TEC TEC MGP_CBAJ_T0080355.1 MGP_CBAJ_G0031109.1 mouse_genomes_project 6 154084156 154216441 + MGP_CBAJ_P0080355 Pik3c2g protein_coding protein_coding MGP_CBAJ_T0008410.1 MGP_CBAJ_G0006802.1 mouse_genomes_project 6 14623851 14662476 + Gm43998 lincRNA lincRNA MGP_CBAJ_T0076997.1 MGP_CBAJ_G0030373.1 mouse_genomes_project 6 50741527 50754099 + MGP_CBAJ_P0076997 Gimap8 protein_coding protein_coding MGP_CBAJ_T0076998.1 MGP_CBAJ_G0030373.1 mouse_genomes_project 6 50741654 50755009 + MGP_CBAJ_P0076998 Gimap8 protein_coding protein_coding MGP_CBAJ_T0076999.1 MGP_CBAJ_G0030373.1 mouse_genomes_project 6 50741677 50754687 + MGP_CBAJ_P0076999 Gimap8 protein_coding protein_coding MGP_CBAJ_T0001959.1 MGP_CBAJ_G0001875.1 mouse_genomes_project 6 61115640 61118367 + TEC TEC MGP_CBAJ_T0078665.1 MGP_CBAJ_G0030744.1 mouse_genomes_project 6 106079708 106302099 + MGP_CBAJ_P0078665 Mitf protein_coding protein_coding MGP_CBAJ_T0078666.1 MGP_CBAJ_G0030744.1 mouse_genomes_project 6 106079714 106217327 + Mitf protein_coding retained_intron MGP_CBAJ_T0078667.1 MGP_CBAJ_G0030744.1 mouse_genomes_project 6 106079714 106304855 + MGP_CBAJ_P0078667 Mitf protein_coding protein_coding MGP_CBAJ_T0078668.1 MGP_CBAJ_G0030744.1 mouse_genomes_project 6 106204934 106302213 + MGP_CBAJ_P0078668 Mitf protein_coding protein_coding MGP_CBAJ_T0078669.1 MGP_CBAJ_G0030744.1 mouse_genomes_project 6 106216065 106302213 + MGP_CBAJ_P0078669 Mitf protein_coding protein_coding MGP_CBAJ_T0078670.1 MGP_CBAJ_G0030744.1 mouse_genomes_project 6 106271530 106302213 + MGP_CBAJ_P0078670 Mitf protein_coding protein_coding MGP_CBAJ_T0078671.1 MGP_CBAJ_G0030744.1 mouse_genomes_project 6 106271557 106302003 + MGP_CBAJ_P0078671 Mitf protein_coding nonsense_mediated_decay MGP_CBAJ_T0078672.1 MGP_CBAJ_G0030744.1 mouse_genomes_project 6 106271659 106301681 + MGP_CBAJ_P0078672 Mitf protein_coding protein_coding MGP_CBAJ_T0077965.1 MGP_CBAJ_G0030605.1 mouse_genomes_project 6 90560767 90566450 + MGP_CBAJ_P0077965 Ankrd53 protein_coding protein_coding MGP_CBAJ_T0077966.1 MGP_CBAJ_G0030605.1 mouse_genomes_project 6 90560809 90566161 + MGP_CBAJ_P0077966 Ankrd53 protein_coding protein_coding MGP_CBAJ_T0008651.1 MGP_CBAJ_G0006980.1 mouse_genomes_project 6 149267045 149278447 + Gm14329 lincRNA lincRNA MGP_CBAJ_T0017974.1 MGP_CBAJ_G0015366.1 mouse_genomes_project 6 14518374 14530593 - Gm43996 processed_transcript lincRNA MGP_CBAJ_T0017975.1 MGP_CBAJ_G0015366.1 mouse_genomes_project 6 14528879 14530547 - Gm43996 processed_transcript retained_intron MGP_CBAJ_T0076978.1 MGP_CBAJ_G0030367.1 mouse_genomes_project 6 50676531 50677643 + MGP_CBAJ_P0076978 protein_coding protein_coding MGP_CBAJ_T0076979.1 MGP_CBAJ_G0030367.1 mouse_genomes_project 6 50676674 50677577 + protein_coding retained_intron MGP_CBAJ_T0015399.1 MGP_CBAJ_G0013511.1 mouse_genomes_project 6 144820761 144820971 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005045.1 MGP_CBAJ_G0004301.1 mouse_genomes_project 6 160923050 160928935 - Sspnos antisense antisense MGP_CBAJ_T0001873.1 MGP_CBAJ_G0001789.1 mouse_genomes_project 6 1450265 1451202 + TEC TEC MGP_CBAJ_T0100681.1 MGP_CBAJ_G0038936.1 mouse_genomes_project 6 78784338 78784534 - Gm24533 snoRNA snoRNA MGP_CBAJ_T0000201.1 MGP_CBAJ_G0000150.1 mouse_genomes_project 6 75227552 75228098 - MGP_CBAJ_P0000201 IG_V_gene IG_V_gene MGP_CBAJ_T0076197.1 MGP_CBAJ_G0030189.1 mouse_genomes_project 6 28735517 28745872 - MGP_CBAJ_P0076197 Prrt4 protein_coding protein_coding MGP_CBAJ_T0078893.1 MGP_CBAJ_G0030784.1 mouse_genomes_project 6 123542681 123552274 - MGP_CBAJ_P0078893 Camk1 protein_coding protein_coding MGP_CBAJ_T0078894.1 MGP_CBAJ_G0030784.1 mouse_genomes_project 6 123542685 123545179 - Camk1 protein_coding retained_intron MGP_CBAJ_T0078895.1 MGP_CBAJ_G0030784.1 mouse_genomes_project 6 123542694 123552194 - Camk1 protein_coding retained_intron MGP_CBAJ_T0078896.1 MGP_CBAJ_G0030784.1 mouse_genomes_project 6 123545272 123549240 - Camk1 protein_coding retained_intron MGP_CBAJ_T0078897.1 MGP_CBAJ_G0030784.1 mouse_genomes_project 6 123546445 123552268 - MGP_CBAJ_P0078897 Camk1 protein_coding protein_coding MGP_CBAJ_T0078898.1 MGP_CBAJ_G0030784.1 mouse_genomes_project 6 123549225 123552253 - Camk1 protein_coding retained_intron MGP_CBAJ_T0100671.1 MGP_CBAJ_G0038926.1 mouse_genomes_project 6 62519297 62519429 + Gm22367 snoRNA snoRNA MGP_CBAJ_T0077683.1 MGP_CBAJ_G0030546.1 mouse_genomes_project 6 78056968 78058597 - Sh2d6 protein_coding processed_transcript MGP_CBAJ_T0077684.1 MGP_CBAJ_G0030546.1 mouse_genomes_project 6 78056978 78063831 - MGP_CBAJ_P0077684 Sh2d6 protein_coding protein_coding MGP_CBAJ_T0077685.1 MGP_CBAJ_G0030546.1 mouse_genomes_project 6 78056980 78063920 - MGP_CBAJ_P0077685 Sh2d6 protein_coding protein_coding MGP_CBAJ_T0077686.1 MGP_CBAJ_G0030546.1 mouse_genomes_project 6 78056980 78063943 - MGP_CBAJ_P0077686 Sh2d6 protein_coding protein_coding MGP_CBAJ_T0077687.1 MGP_CBAJ_G0030546.1 mouse_genomes_project 6 78058633 78063270 - Sh2d6 protein_coding processed_transcript MGP_CBAJ_T0077688.1 MGP_CBAJ_G0030546.1 mouse_genomes_project 6 78060713 78064927 - Sh2d6 protein_coding retained_intron MGP_CBAJ_T0077400.1 MGP_CBAJ_G0030484.1 mouse_genomes_project 6 62246443 62258744 + MGP_CBAJ_P0077400 Herc3 protein_coding protein_coding MGP_CBAJ_T0077401.1 MGP_CBAJ_G0030484.1 mouse_genomes_project 6 62246481 62258730 + MGP_CBAJ_P0077401 Herc3 protein_coding protein_coding MGP_CBAJ_T0077402.1 MGP_CBAJ_G0030484.1 mouse_genomes_project 6 62246502 62269874 + MGP_CBAJ_P0077402 Herc3 protein_coding protein_coding MGP_CBAJ_T0077403.1 MGP_CBAJ_G0030484.1 mouse_genomes_project 6 62246726 62269878 + MGP_CBAJ_P0077403 Herc3 protein_coding protein_coding MGP_CBAJ_T0077404.1 MGP_CBAJ_G0030484.1 mouse_genomes_project 6 62246839 62324742 + MGP_CBAJ_P0077404 Herc3 protein_coding protein_coding MGP_CBAJ_T0077405.1 MGP_CBAJ_G0030484.1 mouse_genomes_project 6 62248678 62340991 + MGP_CBAJ_P0077405 Herc3 protein_coding protein_coding MGP_CBAJ_T0077406.1 MGP_CBAJ_G0030484.1 mouse_genomes_project 6 62277739 62289516 + Herc3 protein_coding retained_intron MGP_CBAJ_T0077407.1 MGP_CBAJ_G0030484.1 mouse_genomes_project 6 62290113 62290813 + Herc3 protein_coding processed_transcript MGP_CBAJ_T0077408.1 MGP_CBAJ_G0030484.1 mouse_genomes_project 6 62305869 62323212 + MGP_CBAJ_P0077408 Herc3 protein_coding protein_coding MGP_CBAJ_T0077409.1 MGP_CBAJ_G0030484.1 mouse_genomes_project 6 62322408 62325170 + Herc3 protein_coding retained_intron MGP_CBAJ_T0077412.1 MGP_CBAJ_G0030484.1 mouse_genomes_project 6 62327922 62337416 + Herc3 protein_coding processed_transcript MGP_CBAJ_T0077413.1 MGP_CBAJ_G0030484.1 mouse_genomes_project 6 62330367 62340993 + MGP_CBAJ_P0077413 Herc3 protein_coding unknown_likely_coding MGP_CBAJ_T0002452.1 MGP_CBAJ_G0002363.1 mouse_genomes_project 6 42764949 42768550 + MGP_CBAJ_P0002452 Trbc1 TR_C_gene TR_C_gene MGP_CBAJ_T0002453.1 MGP_CBAJ_G0002363.1 mouse_genomes_project 6 42764949 42769084 + MGP_CBAJ_P0002453 Trbc1 TR_C_gene TR_C_gene MGP_CBAJ_T0077670.1 MGP_CBAJ_G0030544.1 mouse_genomes_project 6 77931931 77948456 + MGP_CBAJ_P0077670 Ggcx protein_coding protein_coding MGP_CBAJ_T0077671.1 MGP_CBAJ_G0030544.1 mouse_genomes_project 6 77931964 77948086 + MGP_CBAJ_P0077671 Ggcx protein_coding nonsense_mediated_decay MGP_CBAJ_T0077672.1 MGP_CBAJ_G0030544.1 mouse_genomes_project 6 77935528 77947927 + MGP_CBAJ_P0077672 Ggcx protein_coding nonsense_mediated_decay MGP_CBAJ_T0077673.1 MGP_CBAJ_G0030544.1 mouse_genomes_project 6 77935579 77941697 + MGP_CBAJ_P0077673 Ggcx protein_coding nonsense_mediated_decay MGP_CBAJ_T0077674.1 MGP_CBAJ_G0030544.1 mouse_genomes_project 6 77944257 77946943 + MGP_CBAJ_P0077674 Ggcx protein_coding nonsense_mediated_decay MGP_CBAJ_T0000042.1 MGP_CBAJ_G0000034.1 mouse_genomes_project 6 75890878 75890916 + MGP_CBAJ_P0000042 Igkj1 IG_J_gene IG_J_gene MGP_CBAJ_T0000275.1 MGP_CBAJ_G0000220.1 mouse_genomes_project 6 73130002 73130260 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0015012.1 MGP_CBAJ_G0013124.1 mouse_genomes_project 6 3801927 3806078 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015375.1 MGP_CBAJ_G0013487.1 mouse_genomes_project 6 139234612 139234922 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002080.1 MGP_CBAJ_G0001996.1 mouse_genomes_project 6 122127946 122128502 - TEC TEC MGP_CBAJ_T0015320.1 MGP_CBAJ_G0013432.1 mouse_genomes_project 6 123146823 123147298 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0076853.1 MGP_CBAJ_G0030337.1 mouse_genomes_project 6 44184105 44185038 + MGP_CBAJ_P0076853 Olfr447 protein_coding protein_coding MGP_CBAJ_T0079432.1 MGP_CBAJ_G0030878.1 mouse_genomes_project 6 132421502 132448725 + MGP_CBAJ_P0079432 Usp18 protein_coding protein_coding MGP_CBAJ_T0079433.1 MGP_CBAJ_G0030878.1 mouse_genomes_project 6 132429275 132431233 + Usp18 protein_coding retained_intron MGP_CBAJ_T0079434.1 MGP_CBAJ_G0030878.1 mouse_genomes_project 6 132439294 132441031 + Usp18 protein_coding retained_intron MGP_CBAJ_T0079435.1 MGP_CBAJ_G0030878.1 mouse_genomes_project 6 132446396 132447312 + MGP_CBAJ_P0079435 Usp18 protein_coding protein_coding MGP_CBAJ_T0008598.1 MGP_CBAJ_G0006939.1 mouse_genomes_project 6 123095976 123098270 + Gm44081 lincRNA lincRNA MGP_CBAJ_T0077798.1 MGP_CBAJ_G0030573.1 mouse_genomes_project 6 89598305 89627999 - MGP_CBAJ_P0077798 Sema4f protein_coding protein_coding MGP_CBAJ_T0077799.1 MGP_CBAJ_G0030573.1 mouse_genomes_project 6 89600504 89604007 - Sema4f protein_coding processed_transcript MGP_CBAJ_T0077800.1 MGP_CBAJ_G0030573.1 mouse_genomes_project 6 89602642 89627999 - Sema4f protein_coding retained_intron MGP_CBAJ_T0077801.1 MGP_CBAJ_G0030573.1 mouse_genomes_project 6 89605021 89627775 - MGP_CBAJ_P0077801 Sema4f protein_coding nonsense_mediated_decay MGP_CBAJ_T0076789.1 MGP_CBAJ_G0030317.1 mouse_genomes_project 6 43486652 43504189 + MGP_CBAJ_P0076789 Casp2 protein_coding protein_coding MGP_CBAJ_T0076790.1 MGP_CBAJ_G0030317.1 mouse_genomes_project 6 43486723 43490803 + Casp2 protein_coding retained_intron MGP_CBAJ_T0076791.1 MGP_CBAJ_G0030317.1 mouse_genomes_project 6 43486787 43502173 + MGP_CBAJ_P0076791 Casp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076792.1 MGP_CBAJ_G0030317.1 mouse_genomes_project 6 43489058 43489698 + Casp2 protein_coding processed_transcript MGP_CBAJ_T0076793.1 MGP_CBAJ_G0030317.1 mouse_genomes_project 6 43489677 43491288 + Casp2 protein_coding retained_intron MGP_CBAJ_T0076794.1 MGP_CBAJ_G0030317.1 mouse_genomes_project 6 43490965 43501578 + Casp2 protein_coding processed_transcript MGP_CBAJ_T0076795.1 MGP_CBAJ_G0030317.1 mouse_genomes_project 6 43498167 43502214 + Casp2 protein_coding retained_intron MGP_CBAJ_T0076796.1 MGP_CBAJ_G0030317.1 mouse_genomes_project 6 43501317 43502171 + Casp2 protein_coding processed_transcript MGP_CBAJ_T0076797.1 MGP_CBAJ_G0030317.1 mouse_genomes_project 6 43501461 43502322 + Casp2 protein_coding processed_transcript MGP_CBAJ_T0076798.1 MGP_CBAJ_G0030317.1 mouse_genomes_project 6 43501487 43502448 + Casp2 protein_coding processed_transcript MGP_CBAJ_T0077986.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90680247 90740834 + MGP_CBAJ_P0077986 Zfp638 protein_coding protein_coding MGP_CBAJ_T0077987.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90680248 90758036 + MGP_CBAJ_P0077987 Zfp638 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077988.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90726415 90819084 + MGP_CBAJ_P0077988 Zfp638 protein_coding protein_coding MGP_CBAJ_T0077989.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90726419 90743555 + Zfp638 protein_coding retained_intron MGP_CBAJ_T0077990.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90726419 90758012 + Zfp638 protein_coding processed_transcript MGP_CBAJ_T0077991.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90726421 90773680 + MGP_CBAJ_P0077991 Zfp638 protein_coding protein_coding MGP_CBAJ_T0077992.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90726422 90793148 + MGP_CBAJ_P0077992 Zfp638 protein_coding protein_coding MGP_CBAJ_T0077993.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90726438 90814476 + MGP_CBAJ_P0077993 Zfp638 protein_coding protein_coding MGP_CBAJ_T0077994.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90726438 90814478 + MGP_CBAJ_P0077994 Zfp638 protein_coding protein_coding MGP_CBAJ_T0077995.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90726440 90814256 + MGP_CBAJ_P0077995 Zfp638 protein_coding protein_coding MGP_CBAJ_T0077996.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90726443 90727945 + Zfp638 protein_coding retained_intron MGP_CBAJ_T0077997.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90726445 90758048 + Zfp638 protein_coding processed_transcript MGP_CBAJ_T0077998.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90740566 90814230 + MGP_CBAJ_P0077998 Zfp638 protein_coding protein_coding MGP_CBAJ_T0077999.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90740566 90814478 + MGP_CBAJ_P0077999 Zfp638 protein_coding protein_coding MGP_CBAJ_T0078000.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90757654 90759734 + Zfp638 protein_coding retained_intron MGP_CBAJ_T0078001.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90762912 90796845 + MGP_CBAJ_P0078001 Zfp638 protein_coding protein_coding MGP_CBAJ_T0078002.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90778939 90794460 + Zfp638 protein_coding retained_intron MGP_CBAJ_T0078003.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90793203 90795432 + Zfp638 protein_coding retained_intron MGP_CBAJ_T0078004.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90807216 90809444 + Zfp638 protein_coding retained_intron MGP_CBAJ_T0078005.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90811208 90814476 + Zfp638 protein_coding retained_intron MGP_CBAJ_T0078006.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90811208 90814180 + Zfp638 protein_coding retained_intron MGP_CBAJ_T0078007.1 MGP_CBAJ_G0030609.1 mouse_genomes_project 6 90811960 90814224 + Zfp638 protein_coding retained_intron MGP_CBAJ_T0077590.1 MGP_CBAJ_G0030530.1 mouse_genomes_project 6 77070468 77193947 + MGP_CBAJ_P0077590 Reep1 protein_coding protein_coding MGP_CBAJ_T0015203.1 MGP_CBAJ_G0013315.1 mouse_genomes_project 6 72920443 72921171 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004889.1 MGP_CBAJ_G0004190.1 mouse_genomes_project 6 71392353 71393591 - antisense antisense MGP_CBAJ_T0015138.1 MGP_CBAJ_G0013250.1 mouse_genomes_project 6 61368877 61370049 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011535.1 MGP_CBAJ_G0009673.1 mouse_genomes_project 6 108441797 108442119 - Gm24248 misc_RNA misc_RNA MGP_CBAJ_T0080118.1 MGP_CBAJ_G0031053.1 mouse_genomes_project 6 145951747 145952712 - MGP_CBAJ_P0080118 Tas2r129 protein_coding protein_coding MGP_CBAJ_T0015416.1 MGP_CBAJ_G0013528.1 mouse_genomes_project 6 147131305 147131974 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002089.1 MGP_CBAJ_G0002005.1 mouse_genomes_project 6 126373656 126374495 - TEC TEC MGP_CBAJ_T0002095.1 MGP_CBAJ_G0002010.1 mouse_genomes_project 6 128626575 128627767 - TEC TEC MGP_CBAJ_T0008399.1 MGP_CBAJ_G0006795.1 mouse_genomes_project 6 4447601 4452447 + Gm19272 lincRNA lincRNA MGP_CBAJ_T0008400.1 MGP_CBAJ_G0006795.1 mouse_genomes_project 6 4447601 4455442 + Gm19272 lincRNA lincRNA MGP_CBAJ_T0076645.1 MGP_CBAJ_G0030267.1 mouse_genomes_project 6 39863479 39899301 - MGP_CBAJ_P0076645 Parp12 protein_coding protein_coding MGP_CBAJ_T0076646.1 MGP_CBAJ_G0030267.1 mouse_genomes_project 6 39866078 39868156 - Parp12 protein_coding retained_intron MGP_CBAJ_T0008640.1 MGP_CBAJ_G0006974.1 mouse_genomes_project 6 147745230 147768283 - Gm44448 lincRNA lincRNA MGP_CBAJ_T0001881.1 MGP_CBAJ_G0001797.1 mouse_genomes_project 6 4013605 4014959 - TEC TEC MGP_CBAJ_T0010688.1 MGP_CBAJ_G0008826.1 mouse_genomes_project 6 136971030 136971117 + Mir3098 miRNA miRNA MGP_CBAJ_T0001986.1 MGP_CBAJ_G0001902.1 mouse_genomes_project 6 83543958 83547006 - TEC TEC MGP_CBAJ_T0076249.1 MGP_CBAJ_G0030200.1 mouse_genomes_project 6 29111876 29122658 - Kcp protein_coding retained_intron MGP_CBAJ_T0076250.1 MGP_CBAJ_G0030200.1 mouse_genomes_project 6 29120549 29134368 - MGP_CBAJ_P0076250 Kcp protein_coding nonsense_mediated_decay MGP_CBAJ_T0076251.1 MGP_CBAJ_G0030200.1 mouse_genomes_project 6 29120549 29123374 - MGP_CBAJ_P0076251 Kcp protein_coding nonsense_mediated_decay MGP_CBAJ_T0076252.1 MGP_CBAJ_G0030200.1 mouse_genomes_project 6 29120549 29148725 - MGP_CBAJ_P0076252 Kcp protein_coding nonsense_mediated_decay MGP_CBAJ_T0076253.1 MGP_CBAJ_G0030200.1 mouse_genomes_project 6 29120758 29148714 - MGP_CBAJ_P0076253 Kcp protein_coding protein_coding MGP_CBAJ_T0076254.1 MGP_CBAJ_G0030200.1 mouse_genomes_project 6 29122206 29123486 - Kcp protein_coding retained_intron MGP_CBAJ_T0076255.1 MGP_CBAJ_G0030200.1 mouse_genomes_project 6 29135298 29137062 - Kcp protein_coding retained_intron MGP_CBAJ_T0076256.1 MGP_CBAJ_G0030200.1 mouse_genomes_project 6 29136383 29141279 - MGP_CBAJ_P0076256 Kcp protein_coding nonsense_mediated_decay MGP_CBAJ_T0076257.1 MGP_CBAJ_G0030200.1 mouse_genomes_project 6 29140744 29148740 - MGP_CBAJ_P0076257 Kcp protein_coding nonsense_mediated_decay MGP_CBAJ_T0008583.1 MGP_CBAJ_G0006926.1 mouse_genomes_project 6 108527931 108556975 - Gm44290 lincRNA lincRNA MGP_CBAJ_T0010638.1 MGP_CBAJ_G0008776.1 mouse_genomes_project 6 39202769 39202838 + Mir7670 miRNA miRNA MGP_CBAJ_T0101360.1 MGP_CBAJ_G0039438.1 mouse_genomes_project 6 143873261 143893554 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101361.1 MGP_CBAJ_G0039438.1 mouse_genomes_project 6 143873262 143894516 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0008523.1 MGP_CBAJ_G0006881.1 mouse_genomes_project 6 76625126 76625776 - Gm44110 lincRNA lincRNA MGP_CBAJ_T0078251.1 MGP_CBAJ_G0030657.1 mouse_genomes_project 6 94852968 94865110 - MGP_CBAJ_P0078251 Prokr1 protein_coding protein_coding MGP_CBAJ_T0078252.1 MGP_CBAJ_G0030657.1 mouse_genomes_project 6 94852969 94865087 - MGP_CBAJ_P0078252 Prokr1 protein_coding protein_coding MGP_CBAJ_T0078253.1 MGP_CBAJ_G0030657.1 mouse_genomes_project 6 94862777 94865086 - MGP_CBAJ_P0078253 Prokr1 protein_coding protein_coding MGP_CBAJ_T0010672.1 MGP_CBAJ_G0008810.1 mouse_genomes_project 6 118047481 118047542 + Mir7661 miRNA miRNA MGP_CBAJ_T0004820.1 MGP_CBAJ_G0004138.1 mouse_genomes_project 6 5576294 5586129 - Gm16055 antisense antisense MGP_CBAJ_T0008576.1 MGP_CBAJ_G0006922.1 mouse_genomes_project 6 106843475 107080704 - Gm44196 lincRNA lincRNA MGP_CBAJ_T0008578.1 MGP_CBAJ_G0006922.1 mouse_genomes_project 6 107037224 107080723 - Gm44196 lincRNA lincRNA MGP_CBAJ_T0008579.1 MGP_CBAJ_G0006922.1 mouse_genomes_project 6 107074426 107080753 - Gm44196 lincRNA lincRNA MGP_CBAJ_T0002054.1 MGP_CBAJ_G0001970.1 mouse_genomes_project 6 100946863 100951865 + TEC TEC MGP_CBAJ_T0102002.1 MGP_CBAJ_G0040033.1 mouse_genomes_project 6 66858662 66858993 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0078117.1 MGP_CBAJ_G0030632.1 mouse_genomes_project 6 93174028 93178688 + Figla protein_coding processed_transcript MGP_CBAJ_T0078118.1 MGP_CBAJ_G0030632.1 mouse_genomes_project 6 93175086 93178898 + MGP_CBAJ_P0078118 Figla protein_coding protein_coding MGP_CBAJ_T0015379.1 MGP_CBAJ_G0013491.1 mouse_genomes_project 6 139899575 139899801 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004979.1 MGP_CBAJ_G0004242.1 mouse_genomes_project 6 123478875 123479969 - Gm16161 antisense antisense MGP_CBAJ_T0005547.1 MGP_CBAJ_G0004665.1 mouse_genomes_project 6 126086323 126088130 + D830050J10Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_CBAJ_T0005548.1 MGP_CBAJ_G0004665.1 mouse_genomes_project 6 126086350 126087494 + D830050J10Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_CBAJ_T0079099.1 MGP_CBAJ_G0030823.1 mouse_genomes_project 6 126276884 126293656 - MGP_CBAJ_P0079099 Mbd4 protein_coding protein_coding MGP_CBAJ_T0079100.1 MGP_CBAJ_G0030823.1 mouse_genomes_project 6 126280978 126288225 - Mbd4 protein_coding processed_transcript MGP_CBAJ_T0079101.1 MGP_CBAJ_G0030823.1 mouse_genomes_project 6 126282106 126293650 - MGP_CBAJ_P0079101 Mbd4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079102.1 MGP_CBAJ_G0030823.1 mouse_genomes_project 6 126282106 126288501 - MGP_CBAJ_P0079102 Mbd4 protein_coding protein_coding MGP_CBAJ_T0079103.1 MGP_CBAJ_G0030823.1 mouse_genomes_project 6 126287214 126293573 - MGP_CBAJ_P0079103 Mbd4 protein_coding protein_coding MGP_CBAJ_T0100647.1 MGP_CBAJ_G0038902.1 mouse_genomes_project 6 5054833 5054962 + Gm22276 snoRNA snoRNA MGP_CBAJ_T0000259.1 MGP_CBAJ_G0000204.1 mouse_genomes_project 6 72179413 72179868 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0008682.1 MGP_CBAJ_G0007002.1 mouse_genomes_project 6 163902684 163922899 - 4930528G23Rik lincRNA lincRNA MGP_CBAJ_T0076506.1 MGP_CBAJ_G0030238.1 mouse_genomes_project 6 35110947 35117196 - MGP_CBAJ_P0076506 3110062M04Rik protein_coding protein_coding MGP_CBAJ_T0076507.1 MGP_CBAJ_G0030238.1 mouse_genomes_project 6 35111016 35117235 - MGP_CBAJ_P0076507 3110062M04Rik protein_coding protein_coding MGP_CBAJ_T0076509.1 MGP_CBAJ_G0030238.1 mouse_genomes_project 6 35112871 35117184 - MGP_CBAJ_P0076509 3110062M04Rik protein_coding protein_coding MGP_CBAJ_T0076510.1 MGP_CBAJ_G0030238.1 mouse_genomes_project 6 35113819 35116304 - MGP_CBAJ_P0076510 3110062M04Rik protein_coding protein_coding MGP_CBAJ_T0076511.1 MGP_CBAJ_G0030238.1 mouse_genomes_project 6 35114519 35116155 - 3110062M04Rik protein_coding retained_intron MGP_CBAJ_T0080116.1 MGP_CBAJ_G0031051.1 mouse_genomes_project 6 145920910 145921861 + MGP_CBAJ_P0080116 Tas2r109 protein_coding protein_coding MGP_CBAJ_T0077875.1 MGP_CBAJ_G0030589.1 mouse_genomes_project 6 89840809 89857242 + MGP_CBAJ_P0077875 Rtkn protein_coding protein_coding MGP_CBAJ_T0077876.1 MGP_CBAJ_G0030589.1 mouse_genomes_project 6 89841158 89860263 + MGP_CBAJ_P0077876 Rtkn protein_coding protein_coding MGP_CBAJ_T0077877.1 MGP_CBAJ_G0030589.1 mouse_genomes_project 6 89842435 89860263 + MGP_CBAJ_P0077877 Rtkn protein_coding protein_coding MGP_CBAJ_T0077878.1 MGP_CBAJ_G0030589.1 mouse_genomes_project 6 89842456 89860263 + MGP_CBAJ_P0077878 Rtkn protein_coding protein_coding MGP_CBAJ_T0077879.1 MGP_CBAJ_G0030589.1 mouse_genomes_project 6 89843521 89860268 + MGP_CBAJ_P0077879 Rtkn protein_coding unknown_likely_coding MGP_CBAJ_T0077880.1 MGP_CBAJ_G0030589.1 mouse_genomes_project 6 89847787 89855838 + MGP_CBAJ_P0077880 Rtkn protein_coding protein_coding MGP_CBAJ_T0077881.1 MGP_CBAJ_G0030589.1 mouse_genomes_project 6 89847959 89855360 + MGP_CBAJ_P0077881 Rtkn protein_coding protein_coding MGP_CBAJ_T0077882.1 MGP_CBAJ_G0030589.1 mouse_genomes_project 6 89855519 89857924 + Rtkn protein_coding retained_intron MGP_CBAJ_T0077884.1 MGP_CBAJ_G0030589.1 mouse_genomes_project 6 89858438 89859892 + Rtkn protein_coding retained_intron MGP_CBAJ_T0015180.1 MGP_CBAJ_G0013292.1 mouse_genomes_project 6 70873294 70875209 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0080123.1 MGP_CBAJ_G0031058.1 mouse_genomes_project 6 146074362 146075364 - MGP_CBAJ_P0080123 Tas2r123 protein_coding protein_coding MGP_CBAJ_T0010669.1 MGP_CBAJ_G0008807.1 mouse_genomes_project 6 111719322 111719424 + Mir6373 miRNA miRNA MGP_CBAJ_T0015384.1 MGP_CBAJ_G0013496.1 mouse_genomes_project 6 140977007 140977121 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011512.1 MGP_CBAJ_G0009650.1 mouse_genomes_project 6 49731997 49732109 - Rny1 misc_RNA misc_RNA MGP_CBAJ_T0011533.1 MGP_CBAJ_G0009671.1 mouse_genomes_project 6 95764562 95764887 + Gm25178 misc_RNA misc_RNA MGP_CBAJ_T0001893.1 MGP_CBAJ_G0001809.1 mouse_genomes_project 6 19901186 19907933 + TEC TEC MGP_CBAJ_T0076076.1 MGP_CBAJ_G0030158.1 mouse_genomes_project 6 21086592 21139689 - MGP_CBAJ_P0076076 Fam3c protein_coding protein_coding MGP_CBAJ_T0076077.1 MGP_CBAJ_G0030158.1 mouse_genomes_project 6 21087952 21139592 - MGP_CBAJ_P0076077 Fam3c protein_coding protein_coding MGP_CBAJ_T0076078.1 MGP_CBAJ_G0030158.1 mouse_genomes_project 6 21088530 21109513 - Fam3c protein_coding processed_transcript MGP_CBAJ_T0076079.1 MGP_CBAJ_G0030158.1 mouse_genomes_project 6 21089397 21139567 - MGP_CBAJ_P0076079 Fam3c protein_coding nonsense_mediated_decay MGP_CBAJ_T0076080.1 MGP_CBAJ_G0030158.1 mouse_genomes_project 6 21102358 21127339 - MGP_CBAJ_P0076080 Fam3c protein_coding protein_coding MGP_CBAJ_T0077289.1 MGP_CBAJ_G0030440.1 mouse_genomes_project 6 58260530 58272652 + MGP_CBAJ_P0077289 Aqp1 protein_coding protein_coding MGP_CBAJ_T0008612.1 MGP_CBAJ_G0006951.1 mouse_genomes_project 6 129003716 129006064 + Gm30557 lincRNA lincRNA MGP_CBAJ_T0002066.1 MGP_CBAJ_G0001982.1 mouse_genomes_project 6 109612501 109613108 - TEC TEC MGP_CBAJ_T0008422.1 MGP_CBAJ_G0006811.1 mouse_genomes_project 6 28518406 28572962 + Gm3294 lincRNA lincRNA MGP_CBAJ_T0076834.1 MGP_CBAJ_G0030329.1 mouse_genomes_project 6 43885745 43906958 - MGP_CBAJ_P0076834 Tcaf2 protein_coding protein_coding MGP_CBAJ_T0076835.1 MGP_CBAJ_G0030329.1 mouse_genomes_project 6 43889139 43892170 - Tcaf2 protein_coding retained_intron MGP_CBAJ_T0011502.1 MGP_CBAJ_G0009640.1 mouse_genomes_project 6 16163851 16163988 + Gm27444 misc_RNA misc_RNA MGP_CBAJ_T0076050.1 MGP_CBAJ_G0030154.1 mouse_genomes_project 6 20482284 20565471 - MGP_CBAJ_P0076050 Tspan12 protein_coding protein_coding MGP_CBAJ_T0076051.1 MGP_CBAJ_G0030154.1 mouse_genomes_project 6 20482284 20565906 - MGP_CBAJ_P0076051 Tspan12 protein_coding protein_coding MGP_CBAJ_T0076052.1 MGP_CBAJ_G0030154.1 mouse_genomes_project 6 20508050 20565364 - MGP_CBAJ_P0076052 Tspan12 protein_coding protein_coding MGP_CBAJ_T0076053.1 MGP_CBAJ_G0030154.1 mouse_genomes_project 6 20512446 20565297 - MGP_CBAJ_P0076053 Tspan12 protein_coding protein_coding MGP_CBAJ_T0076054.1 MGP_CBAJ_G0030154.1 mouse_genomes_project 6 20549312 20565552 - MGP_CBAJ_P0076054 Tspan12 protein_coding protein_coding MGP_CBAJ_T0076055.1 MGP_CBAJ_G0030154.1 mouse_genomes_project 6 20564387 20565211 - MGP_CBAJ_P0076055 Tspan12 protein_coding protein_coding MGP_CBAJ_T0008580.1 MGP_CBAJ_G0006924.1 mouse_genomes_project 6 108432971 108445417 - Gm43067 lincRNA lincRNA MGP_CBAJ_T0080133.1 MGP_CBAJ_G0031065.1 mouse_genomes_project 6 147329487 147593643 + MGP_CBAJ_P0080133 Etv6 protein_coding protein_coding MGP_CBAJ_T0080134.1 MGP_CBAJ_G0031065.1 mouse_genomes_project 6 147329755 147571832 + MGP_CBAJ_P0080134 Etv6 protein_coding protein_coding MGP_CBAJ_T0080135.1 MGP_CBAJ_G0031065.1 mouse_genomes_project 6 147454494 147593650 + MGP_CBAJ_P0080135 Etv6 protein_coding protein_coding MGP_CBAJ_T0080136.1 MGP_CBAJ_G0031065.1 mouse_genomes_project 6 147557154 147585499 + Etv6 protein_coding retained_intron MGP_CBAJ_T0080137.1 MGP_CBAJ_G0031065.1 mouse_genomes_project 6 147571112 147572105 + Etv6 protein_coding processed_transcript MGP_CBAJ_T0015075.1 MGP_CBAJ_G0013187.1 mouse_genomes_project 6 37075762 37076191 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005539.1 MGP_CBAJ_G0004661.1 mouse_genomes_project 6 64861500 64863734 - A730020E08Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_CBAJ_T0005540.1 MGP_CBAJ_G0004661.1 mouse_genomes_project 6 64863191 64869469 - A730020E08Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_CBAJ_T0005541.1 MGP_CBAJ_G0004661.1 mouse_genomes_project 6 64865219 64870009 - A730020E08Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_CBAJ_T0077369.1 MGP_CBAJ_G0030469.1 mouse_genomes_project 6 60939333 60947321 - MGP_CBAJ_P0077369 Pyurf protein_coding protein_coding MGP_CBAJ_T0098435.1 MGP_CBAJ_G0036697.1 mouse_genomes_project 6 41099200 41127653 + sense_intronic sense_intronic MGP_CBAJ_T0100683.1 MGP_CBAJ_G0038938.1 mouse_genomes_project 6 88373751 88373869 + Gm22530 snoRNA snoRNA MGP_CBAJ_T0015440.1 MGP_CBAJ_G0013552.1 mouse_genomes_project 6 162247845 162249412 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0077087.1 MGP_CBAJ_G0030396.1 mouse_genomes_project 6 52421003 52427715 + Mpp6 protein_coding retained_intron MGP_CBAJ_T0077088.1 MGP_CBAJ_G0030396.1 mouse_genomes_project 6 52424267 52524338 + MGP_CBAJ_P0077088 Mpp6 protein_coding protein_coding MGP_CBAJ_T0077089.1 MGP_CBAJ_G0030396.1 mouse_genomes_project 6 52424269 52524349 + MGP_CBAJ_P0077089 Mpp6 protein_coding protein_coding MGP_CBAJ_T0077090.1 MGP_CBAJ_G0030396.1 mouse_genomes_project 6 52424276 52524690 + MGP_CBAJ_P0077090 Mpp6 protein_coding protein_coding MGP_CBAJ_T0077091.1 MGP_CBAJ_G0030396.1 mouse_genomes_project 6 52424296 52524175 + MGP_CBAJ_P0077091 Mpp6 protein_coding protein_coding MGP_CBAJ_T0077092.1 MGP_CBAJ_G0030396.1 mouse_genomes_project 6 52424320 52488180 + MGP_CBAJ_P0077092 Mpp6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077093.1 MGP_CBAJ_G0030396.1 mouse_genomes_project 6 52424773 52506641 + MGP_CBAJ_P0077093 Mpp6 protein_coding protein_coding MGP_CBAJ_T0077094.1 MGP_CBAJ_G0030396.1 mouse_genomes_project 6 52506327 52522583 + Mpp6 protein_coding processed_transcript MGP_CBAJ_T0077097.1 MGP_CBAJ_G0030396.1 mouse_genomes_project 6 52520440 52524078 + Mpp6 protein_coding retained_intron MGP_CBAJ_T0100712.1 MGP_CBAJ_G0038967.1 mouse_genomes_project 6 149094261 149094376 + Gm25136 snoRNA snoRNA MGP_CBAJ_T0002663.1 MGP_CBAJ_G0002543.1 mouse_genomes_project 6 42175631 42176033 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0079557.1 MGP_CBAJ_G0030908.1 mouse_genomes_project 6 135403024 135760664 + MGP_CBAJ_P0079557 Vmn2r24 protein_coding protein_coding MGP_CBAJ_T0076631.1 MGP_CBAJ_G0030264.1 mouse_genomes_project 6 39402797 39422613 + MGP_CBAJ_P0076631 Clec2l protein_coding protein_coding MGP_CBAJ_T0077115.1 MGP_CBAJ_G0030401.1 mouse_genomes_project 6 53910745 53939088 + MGP_CBAJ_P0077115 Nfe2l3 protein_coding protein_coding MGP_CBAJ_T0077116.1 MGP_CBAJ_G0030401.1 mouse_genomes_project 6 53910824 53915005 + Nfe2l3 protein_coding processed_transcript MGP_CBAJ_T0077117.1 MGP_CBAJ_G0030401.1 mouse_genomes_project 6 53910824 53937196 + MGP_CBAJ_P0077117 Nfe2l3 protein_coding protein_coding MGP_CBAJ_T0002670.1 MGP_CBAJ_G0002550.1 mouse_genomes_project 6 42333034 42333325 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0015218.1 MGP_CBAJ_G0013330.1 mouse_genomes_project 6 77519330 77520432 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008685.1 MGP_CBAJ_G0007005.1 mouse_genomes_project 6 164288294 164290912 + Gm26540 lincRNA lincRNA MGP_CBAJ_T0010647.1 MGP_CBAJ_G0008785.1 mouse_genomes_project 6 59198881 59198985 - Gm44413 miRNA miRNA MGP_CBAJ_T0077064.1 MGP_CBAJ_G0030390.1 mouse_genomes_project 6 51243894 51389552 - MGP_CBAJ_P0077064 Igf2bp3 protein_coding protein_coding MGP_CBAJ_T0077065.1 MGP_CBAJ_G0030390.1 mouse_genomes_project 6 51246789 51252867 - Igf2bp3 protein_coding retained_intron MGP_CBAJ_T0077066.1 MGP_CBAJ_G0030390.1 mouse_genomes_project 6 51251766 51388757 - Igf2bp3 protein_coding retained_intron MGP_CBAJ_T0077067.1 MGP_CBAJ_G0030390.1 mouse_genomes_project 6 51268372 51272066 - Igf2bp3 protein_coding processed_transcript MGP_CBAJ_T0077068.1 MGP_CBAJ_G0030390.1 mouse_genomes_project 6 51336388 51389300 - Igf2bp3 protein_coding processed_transcript MGP_CBAJ_T0004981.1 MGP_CBAJ_G0004244.1 mouse_genomes_project 6 123851412 123853540 - Gm44199 antisense antisense MGP_CBAJ_T0004873.1 MGP_CBAJ_G0004178.1 mouse_genomes_project 6 54749743 54767485 + Hoxaas3 antisense antisense MGP_CBAJ_T0004874.1 MGP_CBAJ_G0004178.1 mouse_genomes_project 6 54749761 54790511 + Hoxaas3 antisense antisense MGP_CBAJ_T0004877.1 MGP_CBAJ_G0004178.1 mouse_genomes_project 6 54775579 54789050 + Hoxaas3 antisense antisense MGP_CBAJ_T0098441.1 MGP_CBAJ_G0036703.1 mouse_genomes_project 6 107853506 107857399 - Gm20705 sense_intronic sense_intronic MGP_CBAJ_T0098501.1 MGP_CBAJ_G0036757.1 mouse_genomes_project 6 99092981 99102952 + Gm45216 sense_overlapping sense_overlapping MGP_CBAJ_T0004856.1 MGP_CBAJ_G0004165.1 mouse_genomes_project 6 40473278 40481993 - Gm16272 antisense antisense MGP_CBAJ_T0015308.1 MGP_CBAJ_G0013420.1 mouse_genomes_project 6 118774410 118774888 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0079300.1 MGP_CBAJ_G0030858.1 mouse_genomes_project 6 130374950 130377772 + MGP_CBAJ_P0079300 Fbxl14 protein_coding protein_coding MGP_CBAJ_T0001955.1 MGP_CBAJ_G0001871.1 mouse_genomes_project 6 59898553 59900160 + TEC TEC MGP_CBAJ_T0078429.1 MGP_CBAJ_G0030687.1 mouse_genomes_project 6 97241264 97242362 - MGP_CBAJ_P0078429 Vmn1r42 protein_coding protein_coding MGP_CBAJ_T0076799.1 MGP_CBAJ_G0030318.1 mouse_genomes_project 6 43508370 43536342 + MGP_CBAJ_P0076799 Clcn1 protein_coding protein_coding MGP_CBAJ_T0076800.1 MGP_CBAJ_G0030318.1 mouse_genomes_project 6 43508452 43535864 + MGP_CBAJ_P0076800 Clcn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076801.1 MGP_CBAJ_G0030318.1 mouse_genomes_project 6 43508541 43535915 + MGP_CBAJ_P0076801 Clcn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076802.1 MGP_CBAJ_G0030318.1 mouse_genomes_project 6 43508541 43535864 + MGP_CBAJ_P0076802 Clcn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076803.1 MGP_CBAJ_G0030318.1 mouse_genomes_project 6 43508541 43535864 + MGP_CBAJ_P0076803 Clcn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076804.1 MGP_CBAJ_G0030318.1 mouse_genomes_project 6 43508541 43535864 + MGP_CBAJ_P0076804 Clcn1 protein_coding protein_coding MGP_CBAJ_T0076805.1 MGP_CBAJ_G0030318.1 mouse_genomes_project 6 43508551 43535643 + MGP_CBAJ_P0076805 Clcn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076806.1 MGP_CBAJ_G0030318.1 mouse_genomes_project 6 43520585 43537442 + Clcn1 protein_coding processed_transcript MGP_CBAJ_T0076807.1 MGP_CBAJ_G0030318.1 mouse_genomes_project 6 43531830 43534750 + MGP_CBAJ_P0076807 Clcn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076808.1 MGP_CBAJ_G0030318.1 mouse_genomes_project 6 43534177 43535030 + Clcn1 protein_coding retained_intron MGP_CBAJ_T0015020.1 MGP_CBAJ_G0013132.1 mouse_genomes_project 6 5601037 5602821 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0079887.1 MGP_CBAJ_G0030974.1 mouse_genomes_project 6 139112781 139121228 + MGP_CBAJ_P0079887 Fgf23 protein_coding protein_coding MGP_CBAJ_T0015014.1 MGP_CBAJ_G0013126.1 mouse_genomes_project 6 4332842 4335930 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0102025.1 MGP_CBAJ_G0040056.1 mouse_genomes_project 6 140987838 141002451 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0102026.1 MGP_CBAJ_G0040056.1 mouse_genomes_project 6 140987861 140997660 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0002140.1 MGP_CBAJ_G0002055.1 mouse_genomes_project 6 160209911 160210821 + TEC TEC MGP_CBAJ_T0076187.1 MGP_CBAJ_G0030187.1 mouse_genomes_project 6 28611331 28625002 + MGP_CBAJ_P0076187 Lep protein_coding protein_coding MGP_CBAJ_T0076188.1 MGP_CBAJ_G0030187.1 mouse_genomes_project 6 28616604 28622114 + MGP_CBAJ_P0076188 Lep protein_coding protein_coding MGP_CBAJ_T0015298.1 MGP_CBAJ_G0013410.1 mouse_genomes_project 6 112574173 112575131 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100698.1 MGP_CBAJ_G0038953.1 mouse_genomes_project 6 127337805 127337929 - Gm22882 snoRNA snoRNA MGP_CBAJ_T0002664.1 MGP_CBAJ_G0002544.1 mouse_genomes_project 6 42180859 42181144 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0077252.1 MGP_CBAJ_G0030431.1 mouse_genomes_project 6 57427274 57486115 + MGP_CBAJ_P0077252 Plekha8 protein_coding protein_coding MGP_CBAJ_T0077254.1 MGP_CBAJ_G0030431.1 mouse_genomes_project 6 57437786 57481299 + MGP_CBAJ_P0077254 Plekha8 protein_coding protein_coding MGP_CBAJ_T0010625.1 MGP_CBAJ_G0008763.1 mouse_genomes_project 6 27370381 27370477 - Mir592 miRNA miRNA MGP_CBAJ_T0002077.1 MGP_CBAJ_G0001993.1 mouse_genomes_project 6 112632211 112633705 + TEC TEC MGP_CBAJ_T0102036.1 MGP_CBAJ_G0040066.1 mouse_genomes_project 6 145893042 145894034 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0004923.1 MGP_CBAJ_G0004211.1 mouse_genomes_project 6 93247447 93250165 - Gm44089 antisense antisense MGP_CBAJ_T0008555.1 MGP_CBAJ_G0006907.1 mouse_genomes_project 6 94872154 94873594 + Gm44201 lincRNA lincRNA MGP_CBAJ_T0008402.1 MGP_CBAJ_G0006797.1 mouse_genomes_project 6 8345651 8427170 + Gm44004 lincRNA lincRNA MGP_CBAJ_T0099463.1 MGP_CBAJ_G0037718.1 mouse_genomes_project 6 142459219 142459293 + Gm23977 snRNA snRNA MGP_CBAJ_T0001966.1 MGP_CBAJ_G0001882.1 mouse_genomes_project 6 76739709 76745317 - TEC TEC MGP_CBAJ_T0077410.1 MGP_CBAJ_G0030485.1 mouse_genomes_project 6 62325893 62327737 - MGP_CBAJ_P0077410 Nap1l5 protein_coding protein_coding MGP_CBAJ_T0077411.1 MGP_CBAJ_G0030485.1 mouse_genomes_project 6 62326464 62327334 - MGP_CBAJ_P0077411 Nap1l5 protein_coding protein_coding MGP_CBAJ_T0008611.1 MGP_CBAJ_G0006950.1 mouse_genomes_project 6 128988791 128990549 - 1700069P05Rik lincRNA lincRNA MGP_CBAJ_T0079898.1 MGP_CBAJ_G0030977.1 mouse_genomes_project 6 139544576 139574682 + MGP_CBAJ_P0079898 Parp11 protein_coding protein_coding MGP_CBAJ_T0079899.1 MGP_CBAJ_G0030977.1 mouse_genomes_project 6 139548936 139568576 + Parp11 protein_coding retained_intron MGP_CBAJ_T0079900.1 MGP_CBAJ_G0030977.1 mouse_genomes_project 6 139548964 139574633 + MGP_CBAJ_P0079900 Parp11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079901.1 MGP_CBAJ_G0030977.1 mouse_genomes_project 6 139548982 139567474 + Parp11 protein_coding retained_intron MGP_CBAJ_T0079902.1 MGP_CBAJ_G0030977.1 mouse_genomes_project 6 139548991 139575604 + MGP_CBAJ_P0079902 Parp11 protein_coding protein_coding MGP_CBAJ_T0079903.1 MGP_CBAJ_G0030977.1 mouse_genomes_project 6 139549115 139593515 + MGP_CBAJ_P0079903 Parp11 protein_coding protein_coding MGP_CBAJ_T0079904.1 MGP_CBAJ_G0030977.1 mouse_genomes_project 6 139568074 139569834 + Parp11 protein_coding retained_intron MGP_CBAJ_T0079905.1 MGP_CBAJ_G0030977.1 mouse_genomes_project 6 139570692 139575495 + Parp11 protein_coding retained_intron MGP_CBAJ_T0079906.1 MGP_CBAJ_G0030977.1 mouse_genomes_project 6 139574203 139589315 + Parp11 protein_coding retained_intron MGP_CBAJ_T0015228.1 MGP_CBAJ_G0013340.1 mouse_genomes_project 6 82062444 82063727 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015346.1 MGP_CBAJ_G0013458.1 mouse_genomes_project 6 132738271 132738596 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0079354.1 MGP_CBAJ_G0030862.1 mouse_genomes_project 6 131107462 131226335 + MGP_CBAJ_P0079354 Ninj2 protein_coding protein_coding MGP_CBAJ_T0079355.1 MGP_CBAJ_G0030862.1 mouse_genomes_project 6 131219305 131226330 + MGP_CBAJ_P0079355 Ninj2 protein_coding protein_coding MGP_CBAJ_T0077496.1 MGP_CBAJ_G0030509.1 mouse_genomes_project 6 71197449 71198681 - MGP_CBAJ_P0077496 Vmn1r39 protein_coding protein_coding MGP_CBAJ_T0102022.1 MGP_CBAJ_G0040053.1 mouse_genomes_project 6 135853805 135854709 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0100693.1 MGP_CBAJ_G0038948.1 mouse_genomes_project 6 109136638 109136772 - Gm23234 snoRNA snoRNA MGP_CBAJ_T0078478.1 MGP_CBAJ_G0030707.1 mouse_genomes_project 6 98155155 98220360 - MGP_CBAJ_P0078478 Iqsec1 protein_coding protein_coding MGP_CBAJ_T0078479.1 MGP_CBAJ_G0030707.1 mouse_genomes_project 6 98158621 98161294 - Iqsec1 protein_coding retained_intron MGP_CBAJ_T0078480.1 MGP_CBAJ_G0030707.1 mouse_genomes_project 6 98158621 98313725 - MGP_CBAJ_P0078480 Iqsec1 protein_coding protein_coding MGP_CBAJ_T0078481.1 MGP_CBAJ_G0030707.1 mouse_genomes_project 6 98161633 98167649 - Iqsec1 protein_coding processed_transcript MGP_CBAJ_T0078482.1 MGP_CBAJ_G0030707.1 mouse_genomes_project 6 98161817 98166997 - Iqsec1 protein_coding processed_transcript MGP_CBAJ_T0078483.1 MGP_CBAJ_G0030707.1 mouse_genomes_project 6 98193765 98198653 - Iqsec1 protein_coding processed_transcript MGP_CBAJ_T0078484.1 MGP_CBAJ_G0030707.1 mouse_genomes_project 6 98194479 98267913 - MGP_CBAJ_P0078484 Iqsec1 protein_coding protein_coding MGP_CBAJ_T0078485.1 MGP_CBAJ_G0030707.1 mouse_genomes_project 6 98194609 98240488 - Iqsec1 protein_coding processed_transcript MGP_CBAJ_T0078486.1 MGP_CBAJ_G0030707.1 mouse_genomes_project 6 98198555 98261345 - Iqsec1 protein_coding processed_transcript MGP_CBAJ_T0101344.1 MGP_CBAJ_G0039429.1 mouse_genomes_project 6 92171400 92173975 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101345.1 MGP_CBAJ_G0039429.1 mouse_genomes_project 6 92173467 92174431 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101346.1 MGP_CBAJ_G0039429.1 mouse_genomes_project 6 92173670 92174686 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0011547.1 MGP_CBAJ_G0009685.1 mouse_genomes_project 6 156518578 156518827 - Gm23775 misc_RNA misc_RNA MGP_CBAJ_T0079620.1 MGP_CBAJ_G0030925.1 mouse_genomes_project 6 136462235 136463743 - Grcc10 protein_coding processed_transcript MGP_CBAJ_T0079621.1 MGP_CBAJ_G0030925.1 mouse_genomes_project 6 136462235 136464422 - MGP_CBAJ_P0079621 Grcc10 protein_coding protein_coding MGP_CBAJ_T0079622.1 MGP_CBAJ_G0030925.1 mouse_genomes_project 6 136462238 136464113 - Grcc10 protein_coding retained_intron MGP_CBAJ_T0079623.1 MGP_CBAJ_G0030925.1 mouse_genomes_project 6 136462239 136463763 - Grcc10 protein_coding retained_intron MGP_CBAJ_T0077813.1 MGP_CBAJ_G0030577.1 mouse_genomes_project 6 89746588 89749894 - MGP_CBAJ_P0077813 Htra2 protein_coding protein_coding MGP_CBAJ_T0077814.1 MGP_CBAJ_G0030577.1 mouse_genomes_project 6 89746588 89749894 - MGP_CBAJ_P0077814 Htra2 protein_coding protein_coding MGP_CBAJ_T0077815.1 MGP_CBAJ_G0030577.1 mouse_genomes_project 6 89746588 89749765 - MGP_CBAJ_P0077815 Htra2 protein_coding protein_coding MGP_CBAJ_T0077816.1 MGP_CBAJ_G0030577.1 mouse_genomes_project 6 89746602 89749894 - MGP_CBAJ_P0077816 Htra2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077817.1 MGP_CBAJ_G0030577.1 mouse_genomes_project 6 89746606 89750596 - Htra2 protein_coding retained_intron MGP_CBAJ_T0077818.1 MGP_CBAJ_G0030577.1 mouse_genomes_project 6 89746709 89749009 - MGP_CBAJ_P0077818 Htra2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0077819.1 MGP_CBAJ_G0030577.1 mouse_genomes_project 6 89746799 89749160 - MGP_CBAJ_P0077819 Htra2 protein_coding protein_coding MGP_CBAJ_T0077820.1 MGP_CBAJ_G0030577.1 mouse_genomes_project 6 89746808 89749160 - Htra2 protein_coding retained_intron MGP_CBAJ_T0077821.1 MGP_CBAJ_G0030577.1 mouse_genomes_project 6 89747071 89749360 - MGP_CBAJ_P0077821 Htra2 protein_coding protein_coding MGP_CBAJ_T0077822.1 MGP_CBAJ_G0030577.1 mouse_genomes_project 6 89748360 89750488 - Htra2 protein_coding processed_transcript MGP_CBAJ_T0077823.1 MGP_CBAJ_G0030577.1 mouse_genomes_project 6 89748469 89749208 - Htra2 protein_coding processed_transcript MGP_CBAJ_T0000283.1 MGP_CBAJ_G0000228.1 mouse_genomes_project 6 73616970 73617256 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0008406.1 MGP_CBAJ_G0006799.1 mouse_genomes_project 6 10215592 10262197 + lincRNA lincRNA MGP_CBAJ_T0098444.1 MGP_CBAJ_G0036706.1 mouse_genomes_project 6 136961590 136961871 - Gm28967 sense_intronic sense_intronic MGP_CBAJ_T0076524.1 MGP_CBAJ_G0030241.1 mouse_genomes_project 6 35194537 35251021 - MGP_CBAJ_P0076524 protein_coding protein_coding MGP_CBAJ_T0076525.1 MGP_CBAJ_G0030241.1 mouse_genomes_project 6 35195194 35261225 - MGP_CBAJ_P0076525 protein_coding protein_coding MGP_CBAJ_T0076526.1 MGP_CBAJ_G0030241.1 mouse_genomes_project 6 35196762 35197837 - protein_coding processed_transcript MGP_CBAJ_T0076527.1 MGP_CBAJ_G0030241.1 mouse_genomes_project 6 35197695 35205158 - MGP_CBAJ_P0076527 protein_coding protein_coding MGP_CBAJ_T0076528.1 MGP_CBAJ_G0030241.1 mouse_genomes_project 6 35203093 35252076 - MGP_CBAJ_P0076528 protein_coding protein_coding MGP_CBAJ_T0015200.1 MGP_CBAJ_G0013312.1 mouse_genomes_project 6 72837124 72838327 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015435.1 MGP_CBAJ_G0013547.1 mouse_genomes_project 6 157790231 157790700 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001943.1 MGP_CBAJ_G0001859.1 mouse_genomes_project 6 48549391 48553141 + TEC TEC MGP_CBAJ_T0001910.1 MGP_CBAJ_G0001826.1 mouse_genomes_project 6 33071326 33074322 - TEC TEC MGP_CBAJ_T0101355.1 MGP_CBAJ_G0039435.1 mouse_genomes_project 6 141598106 141610427 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101356.1 MGP_CBAJ_G0039435.1 mouse_genomes_project 6 141598106 141603990 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0102046.1 MGP_CBAJ_G0040076.1 mouse_genomes_project 6 146828640 146830662 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015235.1 MGP_CBAJ_G0013347.1 mouse_genomes_project 6 85768348 85769108 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000291.1 MGP_CBAJ_G0000236.1 mouse_genomes_project 6 74361218 74361681 + IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0015198.1 MGP_CBAJ_G0013310.1 mouse_genomes_project 6 72729386 72730063 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098439.1 MGP_CBAJ_G0036701.1 mouse_genomes_project 6 95706242 95706707 - Gm44265 sense_intronic sense_intronic MGP_CBAJ_T0101968.1 MGP_CBAJ_G0039999.1 mouse_genomes_project 6 13620 22644 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015084.1 MGP_CBAJ_G0013196.1 mouse_genomes_project 6 40800537 40801621 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0102024.1 MGP_CBAJ_G0040055.1 mouse_genomes_project 6 136266404 136269023 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0077131.1 MGP_CBAJ_G0030403.1 mouse_genomes_project 6 53950905 53962790 + MGP_CBAJ_P0077131 Cbx3 protein_coding unknown_likely_coding MGP_CBAJ_T0077132.1 MGP_CBAJ_G0030403.1 mouse_genomes_project 6 53950983 53955586 + Cbx3 protein_coding retained_intron MGP_CBAJ_T0077133.1 MGP_CBAJ_G0030403.1 mouse_genomes_project 6 53950997 53952381 + Cbx3 protein_coding retained_intron MGP_CBAJ_T0077134.1 MGP_CBAJ_G0030403.1 mouse_genomes_project 6 53951066 53958784 + MGP_CBAJ_P0077134 Cbx3 protein_coding protein_coding MGP_CBAJ_T0077135.1 MGP_CBAJ_G0030403.1 mouse_genomes_project 6 53957734 53960567 + Cbx3 protein_coding retained_intron MGP_CBAJ_T0008601.1 MGP_CBAJ_G0006942.1 mouse_genomes_project 6 125925285 125933022 - Gm44082 lincRNA lincRNA MGP_CBAJ_T0015051.1 MGP_CBAJ_G0013163.1 mouse_genomes_project 6 19545317 19545870 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0001946.1 MGP_CBAJ_G0001862.1 mouse_genomes_project 6 53325471 53326437 + TEC TEC MGP_CBAJ_T0078428.1 MGP_CBAJ_G0030686.1 mouse_genomes_project 6 97142359 97299315 + MGP_CBAJ_P0078428 Vmn1r41 protein_coding protein_coding MGP_CBAJ_T0001992.1 MGP_CBAJ_G0001908.1 mouse_genomes_project 6 86346614 86349268 + TEC TEC MGP_CBAJ_T0011490.1 MGP_CBAJ_G0009628.1 mouse_genomes_project 6 1177386 1177713 + Gm24442 misc_RNA misc_RNA MGP_CBAJ_T0075816.1 MGP_CBAJ_G0030110.1 mouse_genomes_project 6 2473032 2488431 - MGP_CBAJ_P0075816 Pdk4 protein_coding protein_coding MGP_CBAJ_T0075817.1 MGP_CBAJ_G0030110.1 mouse_genomes_project 6 2481298 2488383 - MGP_CBAJ_P0075817 Pdk4 protein_coding protein_coding MGP_CBAJ_T0075818.1 MGP_CBAJ_G0030110.1 mouse_genomes_project 6 2484570 2488397 - Pdk4 protein_coding retained_intron MGP_CBAJ_T0078796.1 MGP_CBAJ_G0030768.1 mouse_genomes_project 6 118387382 118432117 + MGP_CBAJ_P0078796 Arl8b protein_coding protein_coding MGP_CBAJ_T0100699.1 MGP_CBAJ_G0038954.1 mouse_genomes_project 6 128849656 128849788 - Gm23908 snoRNA snoRNA MGP_CBAJ_T0015236.1 MGP_CBAJ_G0013348.1 mouse_genomes_project 6 87914860 87915313 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008569.1 MGP_CBAJ_G0006916.1 mouse_genomes_project 6 97971891 98010451 + lincRNA lincRNA MGP_CBAJ_T0015220.1 MGP_CBAJ_G0013332.1 mouse_genomes_project 6 78611338 78611924 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0077421.1 MGP_CBAJ_G0030489.1 mouse_genomes_project 6 64397015 64494563 - MGP_CBAJ_P0077421 Snca protein_coding protein_coding MGP_CBAJ_T0077422.1 MGP_CBAJ_G0030489.1 mouse_genomes_project 6 64397019 64493712 - MGP_CBAJ_P0077422 Snca protein_coding protein_coding MGP_CBAJ_T0077423.1 MGP_CBAJ_G0030489.1 mouse_genomes_project 6 64473088 64492264 - Snca protein_coding processed_transcript MGP_CBAJ_T0077424.1 MGP_CBAJ_G0030489.1 mouse_genomes_project 6 64479126 64493580 - Snca protein_coding retained_intron MGP_CBAJ_T0077959.1 MGP_CBAJ_G0030604.1 mouse_genomes_project 6 90541730 90557529 + MGP_CBAJ_P0077959 Atp6v1b1 protein_coding protein_coding MGP_CBAJ_T0077960.1 MGP_CBAJ_G0030604.1 mouse_genomes_project 6 90541789 90549410 + Atp6v1b1 protein_coding processed_transcript MGP_CBAJ_T0077961.1 MGP_CBAJ_G0030604.1 mouse_genomes_project 6 90541804 90549938 + MGP_CBAJ_P0077961 Atp6v1b1 protein_coding protein_coding MGP_CBAJ_T0077962.1 MGP_CBAJ_G0030604.1 mouse_genomes_project 6 90541834 90553376 + MGP_CBAJ_P0077962 Atp6v1b1 protein_coding protein_coding MGP_CBAJ_T0077963.1 MGP_CBAJ_G0030604.1 mouse_genomes_project 6 90550465 90552483 + Atp6v1b1 protein_coding retained_intron MGP_CBAJ_T0077964.1 MGP_CBAJ_G0030604.1 mouse_genomes_project 6 90555812 90556906 + Atp6v1b1 protein_coding retained_intron MGP_CBAJ_T0015069.1 MGP_CBAJ_G0013181.1 mouse_genomes_project 6 32608941 32609176 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015424.1 MGP_CBAJ_G0013536.1 mouse_genomes_project 6 153015622 153016222 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098074.1 MGP_CBAJ_G0036347.1 mouse_genomes_project 6 94559545 94559657 + n-R5s164 rRNA rRNA MGP_CBAJ_T0008631.1 MGP_CBAJ_G0006970.1 mouse_genomes_project 6 141273745 141276720 - Gm44067 lincRNA lincRNA MGP_CBAJ_T0002033.1 MGP_CBAJ_G0001949.1 mouse_genomes_project 6 96111634 96114805 + TEC TEC MGP_CBAJ_T0005012.1 MGP_CBAJ_G0004273.1 mouse_genomes_project 6 140645383 140666316 - Gm15862 antisense antisense MGP_CBAJ_T0077347.1 MGP_CBAJ_G0030454.1 mouse_genomes_project 6 60134741 60135805 + MGP_CBAJ_P0077347 Vmn1r6 protein_coding protein_coding MGP_CBAJ_T0100669.1 MGP_CBAJ_G0038924.1 mouse_genomes_project 6 59642589 59642721 - Gm22493 snoRNA snoRNA MGP_CBAJ_T0076245.1 MGP_CBAJ_G0030198.1 mouse_genomes_project 6 29106449 29109229 + MGP_CBAJ_P0076245 Atp6v1f protein_coding protein_coding MGP_CBAJ_T0076246.1 MGP_CBAJ_G0030198.1 mouse_genomes_project 6 29106799 29109229 + MGP_CBAJ_P0076246 Atp6v1f protein_coding protein_coding MGP_CBAJ_T0076247.1 MGP_CBAJ_G0030198.1 mouse_genomes_project 6 29106799 29109229 + MGP_CBAJ_P0076247 Atp6v1f protein_coding protein_coding MGP_CBAJ_T0002662.1 MGP_CBAJ_G0002542.1 mouse_genomes_project 6 42162262 42162538 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0000152.1 MGP_CBAJ_G0000115.1 mouse_genomes_project 6 72871987 72872468 + MGP_CBAJ_P0000152 Igkv14-111 IG_V_gene IG_V_gene MGP_CBAJ_T0078556.1 MGP_CBAJ_G0030719.1 mouse_genomes_project 6 99519315 99521219 + 4930590J08Rik protein_coding retained_intron MGP_CBAJ_T0078557.1 MGP_CBAJ_G0030719.1 mouse_genomes_project 6 99520739 99569524 + MGP_CBAJ_P0078557 4930590J08Rik protein_coding protein_coding MGP_CBAJ_T0078558.1 MGP_CBAJ_G0030719.1 mouse_genomes_project 6 99533562 99569439 + MGP_CBAJ_P0078558 4930590J08Rik protein_coding protein_coding MGP_CBAJ_T0078559.1 MGP_CBAJ_G0030719.1 mouse_genomes_project 6 99563062 99568829 + MGP_CBAJ_P0078559 4930590J08Rik protein_coding protein_coding MGP_CBAJ_T0015058.1 MGP_CBAJ_G0013170.1 mouse_genomes_project 6 23129723 23131745 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0077544.1 MGP_CBAJ_G0030520.1 mouse_genomes_project 6 76388280 76404497 - MGP_CBAJ_P0077544 Thnsl2 protein_coding protein_coding MGP_CBAJ_T0077545.1 MGP_CBAJ_G0030520.1 mouse_genomes_project 6 76388507 76404405 - MGP_CBAJ_P0077545 Thnsl2 protein_coding protein_coding MGP_CBAJ_T0077546.1 MGP_CBAJ_G0030520.1 mouse_genomes_project 6 76388765 76392094 - MGP_CBAJ_P0077546 Thnsl2 protein_coding protein_coding MGP_CBAJ_T0077547.1 MGP_CBAJ_G0030520.1 mouse_genomes_project 6 76391887 76404389 - Thnsl2 protein_coding processed_transcript MGP_CBAJ_T0010631.1 MGP_CBAJ_G0008769.1 mouse_genomes_project 6 29908214 29908284 - Mir183 miRNA miRNA MGP_CBAJ_T0015040.1 MGP_CBAJ_G0013152.1 mouse_genomes_project 6 15937807 15939795 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0078041.1 MGP_CBAJ_G0030616.1 mouse_genomes_project 6 92247966 92368721 - MGP_CBAJ_P0078041 Sfxn5 protein_coding protein_coding MGP_CBAJ_T0078042.1 MGP_CBAJ_G0030616.1 mouse_genomes_project 6 92264213 92299758 - Sfxn5 protein_coding processed_transcript MGP_CBAJ_T0078043.1 MGP_CBAJ_G0030616.1 mouse_genomes_project 6 92269286 92368718 - MGP_CBAJ_P0078043 Sfxn5 protein_coding protein_coding MGP_CBAJ_T0078044.1 MGP_CBAJ_G0030616.1 mouse_genomes_project 6 92303538 92368705 - Sfxn5 protein_coding retained_intron MGP_CBAJ_T0078045.1 MGP_CBAJ_G0030616.1 mouse_genomes_project 6 92329734 92368718 - Sfxn5 protein_coding processed_transcript MGP_CBAJ_T0078046.1 MGP_CBAJ_G0030616.1 mouse_genomes_project 6 92333504 92368721 - MGP_CBAJ_P0078046 Sfxn5 protein_coding protein_coding MGP_CBAJ_T0078047.1 MGP_CBAJ_G0030616.1 mouse_genomes_project 6 92333506 92355683 - Sfxn5 protein_coding processed_transcript MGP_CBAJ_T0078048.1 MGP_CBAJ_G0030616.1 mouse_genomes_project 6 92354156 92368049 - MGP_CBAJ_P0078048 Sfxn5 protein_coding protein_coding MGP_CBAJ_T0078049.1 MGP_CBAJ_G0030616.1 mouse_genomes_project 6 92364251 92368721 - Sfxn5 protein_coding retained_intron MGP_CBAJ_T0078245.1 MGP_CBAJ_G0030654.1 mouse_genomes_project 6 94660938 94666722 - MGP_CBAJ_P0078245 Gkn3 protein_coding protein_coding MGP_CBAJ_T0011494.1 MGP_CBAJ_G0009632.1 mouse_genomes_project 6 5675538 5675850 + Gm24059 misc_RNA misc_RNA MGP_CBAJ_T0080638.1 MGP_CBAJ_G0031161.1 mouse_genomes_project 6 162127214 162139231 - MGP_CBAJ_P0080638 Mansc4 protein_coding protein_coding MGP_CBAJ_T0080639.1 MGP_CBAJ_G0031161.1 mouse_genomes_project 6 162132590 162139200 - MGP_CBAJ_P0080639 Mansc4 protein_coding protein_coding MGP_CBAJ_T0079813.1 MGP_CBAJ_G0030957.1 mouse_genomes_project 6 137096306 137103548 - MGP_CBAJ_P0079813 Ltbr protein_coding protein_coding MGP_CBAJ_T0079814.1 MGP_CBAJ_G0030957.1 mouse_genomes_project 6 137098778 137099232 - Ltbr protein_coding retained_intron MGP_CBAJ_T0079815.1 MGP_CBAJ_G0030957.1 mouse_genomes_project 6 137102395 137102928 - Ltbr protein_coding retained_intron MGP_CBAJ_T0099431.1 MGP_CBAJ_G0037686.1 mouse_genomes_project 6 56158948 56159112 + Gm25818 snRNA snRNA MGP_CBAJ_T0015053.1 MGP_CBAJ_G0013165.1 mouse_genomes_project 6 21019277 21022424 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0077353.1 MGP_CBAJ_G0030460.1 mouse_genomes_project 6 60401589 60402492 + MGP_CBAJ_P0077353 Vmn1r13 protein_coding protein_coding MGP_CBAJ_T0078175.1 MGP_CBAJ_G0030640.1 mouse_genomes_project 6 93652264 93686378 + MGP_CBAJ_P0078175 C87436 protein_coding protein_coding MGP_CBAJ_T0078176.1 MGP_CBAJ_G0030640.1 mouse_genomes_project 6 93652279 93659214 + MGP_CBAJ_P0078176 C87436 protein_coding protein_coding MGP_CBAJ_T0078177.1 MGP_CBAJ_G0030640.1 mouse_genomes_project 6 93652582 93686378 + MGP_CBAJ_P0078177 C87436 protein_coding protein_coding MGP_CBAJ_T0078178.1 MGP_CBAJ_G0030640.1 mouse_genomes_project 6 93652582 93686378 + MGP_CBAJ_P0078178 C87436 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078179.1 MGP_CBAJ_G0030640.1 mouse_genomes_project 6 93652598 93653378 + C87436 protein_coding processed_transcript MGP_CBAJ_T0078180.1 MGP_CBAJ_G0030640.1 mouse_genomes_project 6 93652617 93686378 + MGP_CBAJ_P0078180 C87436 protein_coding protein_coding MGP_CBAJ_T0078181.1 MGP_CBAJ_G0030640.1 mouse_genomes_project 6 93657472 93689493 + MGP_CBAJ_P0078181 C87436 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078182.1 MGP_CBAJ_G0030640.1 mouse_genomes_project 6 93680035 93685937 + C87436 protein_coding processed_transcript MGP_CBAJ_T0080144.1 MGP_CBAJ_G0031067.1 mouse_genomes_project 6 147793216 147933460 - MGP_CBAJ_P0080144 Lrp6 protein_coding protein_coding MGP_CBAJ_T0080145.1 MGP_CBAJ_G0031067.1 mouse_genomes_project 6 147800582 147821682 - Lrp6 protein_coding retained_intron MGP_CBAJ_T0080146.1 MGP_CBAJ_G0031067.1 mouse_genomes_project 6 147812037 147815379 - Lrp6 protein_coding retained_intron MGP_CBAJ_T0080147.1 MGP_CBAJ_G0031067.1 mouse_genomes_project 6 147812970 147818145 - Lrp6 protein_coding retained_intron MGP_CBAJ_T0080148.1 MGP_CBAJ_G0031067.1 mouse_genomes_project 6 147867859 147933512 - MGP_CBAJ_P0080148 Lrp6 protein_coding protein_coding MGP_CBAJ_T0080149.1 MGP_CBAJ_G0031067.1 mouse_genomes_project 6 147901251 147902199 - Lrp6 protein_coding retained_intron MGP_CBAJ_T0078447.1 MGP_CBAJ_G0030700.1 mouse_genomes_project 6 97791822 97812980 - MGP_CBAJ_P0078447 Chst13 protein_coding protein_coding MGP_CBAJ_T0015345.1 MGP_CBAJ_G0013457.1 mouse_genomes_project 6 132276452 132277883 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010634.1 MGP_CBAJ_G0008772.1 mouse_genomes_project 6 30965762 30965833 - Mir29b-1 miRNA miRNA MGP_CBAJ_T0001885.1 MGP_CBAJ_G0001801.1 mouse_genomes_project 6 13612186 13614434 + TEC TEC MGP_CBAJ_T0002072.1 MGP_CBAJ_G0001988.1 mouse_genomes_project 6 110336173 110338282 + TEC TEC MGP_CBAJ_T0076547.1 MGP_CBAJ_G0030245.1 mouse_genomes_project 6 35635536 35650872 - MGP_CBAJ_P0076547 Fam180a protein_coding protein_coding MGP_CBAJ_T0078183.1 MGP_CBAJ_G0030641.1 mouse_genomes_project 6 93751133 93752965 - MGP_CBAJ_P0078183 Pcbp1 protein_coding protein_coding MGP_CBAJ_T0011523.1 MGP_CBAJ_G0009661.1 mouse_genomes_project 6 54856303 54856362 + Gm27280 misc_RNA misc_RNA MGP_CBAJ_T0001905.1 MGP_CBAJ_G0001821.1 mouse_genomes_project 6 29618853 29622465 - TEC TEC MGP_CBAJ_T0001962.1 MGP_CBAJ_G0001878.1 mouse_genomes_project 6 65763962 65765994 + TEC TEC MGP_CBAJ_T0099464.1 MGP_CBAJ_G0037719.1 mouse_genomes_project 6 142988065 142988140 + Gm24676 snRNA snRNA MGP_CBAJ_T0001890.1 MGP_CBAJ_G0001806.1 mouse_genomes_project 6 16173140 16178745 + TEC TEC MGP_CBAJ_T0075840.1 MGP_CBAJ_G0030116.1 mouse_genomes_project 6 4105670 4196917 + MGP_CBAJ_P0075840 Sdhaf3 protein_coding protein_coding MGP_CBAJ_T0075841.1 MGP_CBAJ_G0030116.1 mouse_genomes_project 6 4105673 4117949 + Sdhaf3 protein_coding processed_transcript MGP_CBAJ_T0010624.1 MGP_CBAJ_G0008762.1 mouse_genomes_project 6 21623339 21623442 - Gm23961 miRNA miRNA MGP_CBAJ_T0076897.1 MGP_CBAJ_G0030352.1 mouse_genomes_project 6 49447081 49454833 - MGP_CBAJ_P0076897 Ezh2 protein_coding protein_coding MGP_CBAJ_T0076898.1 MGP_CBAJ_G0030352.1 mouse_genomes_project 6 49447081 49518695 - MGP_CBAJ_P0076898 Ezh2 protein_coding protein_coding MGP_CBAJ_T0076899.1 MGP_CBAJ_G0030352.1 mouse_genomes_project 6 49447081 49518695 - MGP_CBAJ_P0076899 Ezh2 protein_coding protein_coding MGP_CBAJ_T0076900.1 MGP_CBAJ_G0030352.1 mouse_genomes_project 6 49447081 49518695 - MGP_CBAJ_P0076900 Ezh2 protein_coding protein_coding MGP_CBAJ_T0076901.1 MGP_CBAJ_G0030352.1 mouse_genomes_project 6 49447261 49449059 - Ezh2 protein_coding retained_intron MGP_CBAJ_T0076902.1 MGP_CBAJ_G0030352.1 mouse_genomes_project 6 49447483 49497119 - MGP_CBAJ_P0076902 Ezh2 protein_coding protein_coding MGP_CBAJ_T0076903.1 MGP_CBAJ_G0030352.1 mouse_genomes_project 6 49448952 49452068 - Ezh2 protein_coding retained_intron MGP_CBAJ_T0076904.1 MGP_CBAJ_G0030352.1 mouse_genomes_project 6 49449572 49454807 - Ezh2 protein_coding retained_intron MGP_CBAJ_T0076905.1 MGP_CBAJ_G0030352.1 mouse_genomes_project 6 49450684 49461971 - Ezh2 protein_coding retained_intron MGP_CBAJ_T0076906.1 MGP_CBAJ_G0030352.1 mouse_genomes_project 6 49454940 49467851 - MGP_CBAJ_P0076906 Ezh2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076907.1 MGP_CBAJ_G0030352.1 mouse_genomes_project 6 49460093 49467851 - MGP_CBAJ_P0076907 Ezh2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076908.1 MGP_CBAJ_G0030352.1 mouse_genomes_project 6 49461870 49473794 - MGP_CBAJ_P0076908 Ezh2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076909.1 MGP_CBAJ_G0030352.1 mouse_genomes_project 6 49461923 49518723 - MGP_CBAJ_P0076909 Ezh2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076910.1 MGP_CBAJ_G0030352.1 mouse_genomes_project 6 49468473 49519006 - MGP_CBAJ_P0076910 Ezh2 protein_coding protein_coding MGP_CBAJ_T0076911.1 MGP_CBAJ_G0030352.1 mouse_genomes_project 6 49475605 49497466 - Ezh2 protein_coding processed_transcript MGP_CBAJ_T0079359.1 MGP_CBAJ_G0030864.1 mouse_genomes_project 6 131329802 131330871 + MGP_CBAJ_P0079359 D330020A13Rik protein_coding protein_coding MGP_CBAJ_T0076072.1 MGP_CBAJ_G0030157.1 mouse_genomes_project 6 21067762 21073115 + MGP_CBAJ_P0076072 Wnt16 protein_coding protein_coding MGP_CBAJ_T0076073.1 MGP_CBAJ_G0030157.1 mouse_genomes_project 6 21067765 21078058 + MGP_CBAJ_P0076073 Wnt16 protein_coding protein_coding MGP_CBAJ_T0076074.1 MGP_CBAJ_G0030157.1 mouse_genomes_project 6 21067823 21074121 + MGP_CBAJ_P0076074 Wnt16 protein_coding protein_coding MGP_CBAJ_T0076075.1 MGP_CBAJ_G0030157.1 mouse_genomes_project 6 21068396 21077363 + MGP_CBAJ_P0076075 Wnt16 protein_coding protein_coding MGP_CBAJ_T0079278.1 MGP_CBAJ_G0030854.1 mouse_genomes_project 6 130086754 130219364 + MGP_CBAJ_P0079278 Cacna2d4 protein_coding protein_coding MGP_CBAJ_T0079279.1 MGP_CBAJ_G0030854.1 mouse_genomes_project 6 130086755 130135917 + Cacna2d4 protein_coding retained_intron MGP_CBAJ_T0079280.1 MGP_CBAJ_G0030854.1 mouse_genomes_project 6 130086823 130217415 + MGP_CBAJ_P0079280 Cacna2d4 protein_coding protein_coding MGP_CBAJ_T0079281.1 MGP_CBAJ_G0030854.1 mouse_genomes_project 6 130101412 130164971 + Cacna2d4 protein_coding processed_transcript MGP_CBAJ_T0079282.1 MGP_CBAJ_G0030854.1 mouse_genomes_project 6 130104182 130128220 + Cacna2d4 protein_coding processed_transcript MGP_CBAJ_T0079283.1 MGP_CBAJ_G0030854.1 mouse_genomes_project 6 130123818 130127518 + Cacna2d4 protein_coding processed_transcript MGP_CBAJ_T0079284.1 MGP_CBAJ_G0030854.1 mouse_genomes_project 6 130124019 130127561 + Cacna2d4 protein_coding retained_intron MGP_CBAJ_T0079289.1 MGP_CBAJ_G0030854.1 mouse_genomes_project 6 130194312 130208199 + Cacna2d4 protein_coding processed_transcript MGP_CBAJ_T0079290.1 MGP_CBAJ_G0030854.1 mouse_genomes_project 6 130194345 130201461 + Cacna2d4 protein_coding retained_intron MGP_CBAJ_T0079291.1 MGP_CBAJ_G0030854.1 mouse_genomes_project 6 130195651 130217092 + MGP_CBAJ_P0079291 Cacna2d4 protein_coding unknown_likely_coding MGP_CBAJ_T0079292.1 MGP_CBAJ_G0030854.1 mouse_genomes_project 6 130196079 130211395 + Cacna2d4 protein_coding processed_transcript MGP_CBAJ_T0002521.1 MGP_CBAJ_G0002426.1 mouse_genomes_project 6 42758777 42758827 + MGP_CBAJ_P0002521 Trbj1-3 TR_J_gene TR_J_gene MGP_CBAJ_T0002522.1 MGP_CBAJ_G0002426.1 mouse_genomes_project 6 42758777 42758831 + Trbj1-3 TR_J_gene processed_transcript MGP_CBAJ_T0008487.1 MGP_CBAJ_G0006853.1 mouse_genomes_project 6 53187794 53191754 - Gm44109 lincRNA lincRNA MGP_CBAJ_T0011519.1 MGP_CBAJ_G0009657.1 mouse_genomes_project 6 54825192 54825283 + Gm27695 misc_RNA misc_RNA MGP_CBAJ_T0015123.1 MGP_CBAJ_G0013235.1 mouse_genomes_project 6 51998667 51998940 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011509.1 MGP_CBAJ_G0009647.1 mouse_genomes_project 6 47690676 47690980 + Gm22839 misc_RNA misc_RNA MGP_CBAJ_T0002625.1 MGP_CBAJ_G0002512.1 mouse_genomes_project 6 42279898 42280393 + MGP_CBAJ_P0002625 Trbv17 TR_V_gene TR_V_gene MGP_CBAJ_T0010679.1 MGP_CBAJ_G0008817.1 mouse_genomes_project 6 128823242 128823314 + Mir7044 miRNA miRNA MGP_CBAJ_T0015280.1 MGP_CBAJ_G0013392.1 mouse_genomes_project 6 103974248 103975437 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0077489.1 MGP_CBAJ_G0030502.1 mouse_genomes_project 6 70910966 70919897 - MGP_CBAJ_P0077489 Vmn1r32 protein_coding protein_coding MGP_CBAJ_T0015177.1 MGP_CBAJ_G0013289.1 mouse_genomes_project 6 70730266 70730432 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0080238.1 MGP_CBAJ_G0031086.1 mouse_genomes_project 6 150286093 150344346 - MGP_CBAJ_P0080238 Plbd1 protein_coding protein_coding MGP_CBAJ_T0080239.1 MGP_CBAJ_G0031086.1 mouse_genomes_project 6 150287331 150344291 - Plbd1 protein_coding retained_intron MGP_CBAJ_T0080240.1 MGP_CBAJ_G0031086.1 mouse_genomes_project 6 150287904 150306678 - Plbd1 protein_coding retained_intron MGP_CBAJ_T0080241.1 MGP_CBAJ_G0031086.1 mouse_genomes_project 6 150315586 150343981 - MGP_CBAJ_P0080241 Plbd1 protein_coding protein_coding MGP_CBAJ_T0002061.1 MGP_CBAJ_G0001977.1 mouse_genomes_project 6 108729394 108729786 - TEC TEC MGP_CBAJ_T0015411.1 MGP_CBAJ_G0013523.1 mouse_genomes_project 6 146091386 146091763 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0001909.1 MGP_CBAJ_G0001825.1 mouse_genomes_project 6 31197409 31200139 + TEC TEC MGP_CBAJ_T0075753.1 MGP_CBAJ_G0030100.1 mouse_genomes_project 6 866854 876936 - MGP_CBAJ_P0075753 Bet1 protein_coding protein_coding MGP_CBAJ_T0075754.1 MGP_CBAJ_G0030100.1 mouse_genomes_project 6 867674 876883 - Bet1 protein_coding processed_transcript MGP_CBAJ_T0075755.1 MGP_CBAJ_G0030100.1 mouse_genomes_project 6 867828 870060 - Bet1 protein_coding retained_intron MGP_CBAJ_T0075756.1 MGP_CBAJ_G0030100.1 mouse_genomes_project 6 870286 876936 - Bet1 protein_coding retained_intron MGP_CBAJ_T0075757.1 MGP_CBAJ_G0030100.1 mouse_genomes_project 6 871463 876894 - Bet1 protein_coding processed_transcript MGP_CBAJ_T0075758.1 MGP_CBAJ_G0030100.1 mouse_genomes_project 6 871486 876894 - Bet1 protein_coding processed_transcript MGP_CBAJ_T0077214.1 MGP_CBAJ_G0030424.1 mouse_genomes_project 6 56571389 56576751 - MGP_CBAJ_P0077214 Tril protein_coding protein_coding MGP_CBAJ_T0100703.1 MGP_CBAJ_G0038958.1 mouse_genomes_project 6 135613544 135613651 + Gm22763 snoRNA snoRNA MGP_CBAJ_T0015187.1 MGP_CBAJ_G0013299.1 mouse_genomes_project 6 71658373 71659720 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015160.1 MGP_CBAJ_G0013272.1 mouse_genomes_project 6 69089987 69090876 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005027.1 MGP_CBAJ_G0004286.1 mouse_genomes_project 6 152514841 152520780 + A830011K09Rik antisense antisense MGP_CBAJ_T0005028.1 MGP_CBAJ_G0004286.1 mouse_genomes_project 6 152514936 152519489 + A830011K09Rik antisense antisense MGP_CBAJ_T0005029.1 MGP_CBAJ_G0004286.1 mouse_genomes_project 6 152515007 152521413 + A830011K09Rik antisense antisense MGP_CBAJ_T0078958.1 MGP_CBAJ_G0030796.1 mouse_genomes_project 6 123757148 123836626 + MGP_CBAJ_P0078958 Fancd2 protein_coding protein_coding MGP_CBAJ_T0078959.1 MGP_CBAJ_G0030796.1 mouse_genomes_project 6 123757170 123763302 + Fancd2 protein_coding retained_intron MGP_CBAJ_T0078960.1 MGP_CBAJ_G0030796.1 mouse_genomes_project 6 123757170 123764185 + Fancd2 protein_coding retained_intron MGP_CBAJ_T0078961.1 MGP_CBAJ_G0030796.1 mouse_genomes_project 6 123757170 123835882 + MGP_CBAJ_P0078961 Fancd2 protein_coding protein_coding MGP_CBAJ_T0078962.1 MGP_CBAJ_G0030796.1 mouse_genomes_project 6 123781356 123783523 + Fancd2 protein_coding retained_intron MGP_CBAJ_T0078963.1 MGP_CBAJ_G0030796.1 mouse_genomes_project 6 123781360 123795136 + MGP_CBAJ_P0078963 Fancd2 protein_coding protein_coding MGP_CBAJ_T0078964.1 MGP_CBAJ_G0030796.1 mouse_genomes_project 6 123801361 123812438 + MGP_CBAJ_P0078964 Fancd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078965.1 MGP_CBAJ_G0030796.1 mouse_genomes_project 6 123823021 123825586 + Fancd2 protein_coding retained_intron MGP_CBAJ_T0005039.1 MGP_CBAJ_G0004295.1 mouse_genomes_project 6 159563135 159607608 + Sox5os4 antisense antisense MGP_CBAJ_T0079970.1 MGP_CBAJ_G0030992.1 mouse_genomes_project 6 140844323 140850097 - BC048546 protein_coding retained_intron MGP_CBAJ_T0079971.1 MGP_CBAJ_G0030992.1 mouse_genomes_project 6 140844329 140896033 - MGP_CBAJ_P0079971 BC048546 protein_coding protein_coding MGP_CBAJ_T0079972.1 MGP_CBAJ_G0030992.1 mouse_genomes_project 6 140855097 140859913 - BC048546 protein_coding retained_intron MGP_CBAJ_T0079973.1 MGP_CBAJ_G0030992.1 mouse_genomes_project 6 140867249 140868490 - BC048546 protein_coding retained_intron MGP_CBAJ_T0079974.1 MGP_CBAJ_G0030992.1 mouse_genomes_project 6 140885281 140891164 - BC048546 protein_coding retained_intron MGP_CBAJ_T0079055.1 MGP_CBAJ_G0030812.1 mouse_genomes_project 6 125601385 125634156 + MGP_CBAJ_P0079055 Gm17482 protein_coding protein_coding MGP_CBAJ_T0011524.1 MGP_CBAJ_G0009662.1 mouse_genomes_project 6 54857719 54858097 + Gm27985 misc_RNA misc_RNA MGP_CBAJ_T0008430.1 MGP_CBAJ_G0006816.1 mouse_genomes_project 6 30965831 30966235 - Gm27019 lincRNA lincRNA MGP_CBAJ_T0077385.1 MGP_CBAJ_G0030477.1 mouse_genomes_project 6 61296067 61297087 - MGP_CBAJ_P0077385 Vmn1r26 protein_coding protein_coding MGP_CBAJ_T0078024.1 MGP_CBAJ_G0030611.1 mouse_genomes_project 6 91505504 91522177 - MGP_CBAJ_P0078024 Cyp26b1 protein_coding protein_coding MGP_CBAJ_T0078025.1 MGP_CBAJ_G0030611.1 mouse_genomes_project 6 91508369 91522146 - MGP_CBAJ_P0078025 Cyp26b1 protein_coding protein_coding MGP_CBAJ_T0008401.1 MGP_CBAJ_G0006796.1 mouse_genomes_project 6 4927405 4941244 + Gm44217 lincRNA lincRNA MGP_CBAJ_T0076981.1 MGP_CBAJ_G0030369.1 mouse_genomes_project 6 50680910 50689385 + MGP_CBAJ_P0076981 Repin1 protein_coding protein_coding MGP_CBAJ_T0076982.1 MGP_CBAJ_G0030369.1 mouse_genomes_project 6 50680910 50689385 + MGP_CBAJ_P0076982 Repin1 protein_coding protein_coding MGP_CBAJ_T0076983.1 MGP_CBAJ_G0030369.1 mouse_genomes_project 6 50680910 50687693 + MGP_CBAJ_P0076983 Repin1 protein_coding protein_coding MGP_CBAJ_T0076984.1 MGP_CBAJ_G0030369.1 mouse_genomes_project 6 50680918 50689386 + MGP_CBAJ_P0076984 Repin1 protein_coding protein_coding MGP_CBAJ_T0076985.1 MGP_CBAJ_G0030369.1 mouse_genomes_project 6 50680927 50689385 + MGP_CBAJ_P0076985 Repin1 protein_coding protein_coding MGP_CBAJ_T0076986.1 MGP_CBAJ_G0030369.1 mouse_genomes_project 6 50680967 50682359 + Repin1 protein_coding retained_intron MGP_CBAJ_T0076989.1 MGP_CBAJ_G0030369.1 mouse_genomes_project 6 50681344 50686929 + Repin1 protein_coding retained_intron MGP_CBAJ_T0079890.1 MGP_CBAJ_G0030976.1 mouse_genomes_project 6 139169875 139198302 - MGP_CBAJ_P0079890 Ccnd2 protein_coding protein_coding MGP_CBAJ_T0079891.1 MGP_CBAJ_G0030976.1 mouse_genomes_project 6 139175204 139183884 - Ccnd2 protein_coding processed_transcript MGP_CBAJ_T0079892.1 MGP_CBAJ_G0030976.1 mouse_genomes_project 6 139183824 139191413 - Ccnd2 protein_coding processed_transcript MGP_CBAJ_T0079893.1 MGP_CBAJ_G0030976.1 mouse_genomes_project 6 139190747 139199435 - MGP_CBAJ_P0079893 Ccnd2 protein_coding protein_coding MGP_CBAJ_T0079894.1 MGP_CBAJ_G0030976.1 mouse_genomes_project 6 139192226 139198249 - Ccnd2 protein_coding retained_intron MGP_CBAJ_T0079895.1 MGP_CBAJ_G0030976.1 mouse_genomes_project 6 139193008 139198275 - MGP_CBAJ_P0079895 Ccnd2 protein_coding protein_coding MGP_CBAJ_T0079896.1 MGP_CBAJ_G0030976.1 mouse_genomes_project 6 139193025 139198249 - MGP_CBAJ_P0079896 Ccnd2 protein_coding protein_coding MGP_CBAJ_T0079897.1 MGP_CBAJ_G0030976.1 mouse_genomes_project 6 139198022 139198203 - Ccnd2 protein_coding processed_transcript MGP_CBAJ_T0079565.1 MGP_CBAJ_G0030913.1 mouse_genomes_project 6 136122577 136143490 - MGP_CBAJ_P0079565 Pex5 protein_coding protein_coding MGP_CBAJ_T0079566.1 MGP_CBAJ_G0030913.1 mouse_genomes_project 6 136122578 136142856 - MGP_CBAJ_P0079566 Pex5 protein_coding protein_coding MGP_CBAJ_T0079567.1 MGP_CBAJ_G0030913.1 mouse_genomes_project 6 136122578 136143490 - MGP_CBAJ_P0079567 Pex5 protein_coding protein_coding MGP_CBAJ_T0079568.1 MGP_CBAJ_G0030913.1 mouse_genomes_project 6 136122578 136143286 - MGP_CBAJ_P0079568 Pex5 protein_coding protein_coding MGP_CBAJ_T0079569.1 MGP_CBAJ_G0030913.1 mouse_genomes_project 6 136122593 136143460 - MGP_CBAJ_P0079569 Pex5 protein_coding protein_coding MGP_CBAJ_T0079570.1 MGP_CBAJ_G0030913.1 mouse_genomes_project 6 136123672 136128037 - Pex5 protein_coding retained_intron MGP_CBAJ_T0079571.1 MGP_CBAJ_G0030913.1 mouse_genomes_project 6 136131552 136142465 - Pex5 protein_coding processed_transcript MGP_CBAJ_T0079572.1 MGP_CBAJ_G0030913.1 mouse_genomes_project 6 136132735 136133790 - Pex5 protein_coding retained_intron MGP_CBAJ_T0001874.1 MGP_CBAJ_G0001790.1 mouse_genomes_project 6 1637385 1639035 + TEC TEC MGP_CBAJ_T0079489.1 MGP_CBAJ_G0030888.1 mouse_genomes_project 6 133914074 133926961 + MGP_CBAJ_P0079489 Mfap5 protein_coding protein_coding MGP_CBAJ_T0079490.1 MGP_CBAJ_G0030888.1 mouse_genomes_project 6 133925168 133940310 + MGP_CBAJ_P0079490 Mfap5 protein_coding protein_coding MGP_CBAJ_T0079491.1 MGP_CBAJ_G0030888.1 mouse_genomes_project 6 133925168 133940834 + MGP_CBAJ_P0079491 Mfap5 protein_coding protein_coding MGP_CBAJ_T0079492.1 MGP_CBAJ_G0030888.1 mouse_genomes_project 6 133925244 133940176 + MGP_CBAJ_P0079492 Mfap5 protein_coding protein_coding MGP_CBAJ_T0079493.1 MGP_CBAJ_G0030888.1 mouse_genomes_project 6 133925261 133939882 + MGP_CBAJ_P0079493 Mfap5 protein_coding protein_coding MGP_CBAJ_T0079494.1 MGP_CBAJ_G0030888.1 mouse_genomes_project 6 133925261 133940176 + MGP_CBAJ_P0079494 Mfap5 protein_coding protein_coding MGP_CBAJ_T0079495.1 MGP_CBAJ_G0030888.1 mouse_genomes_project 6 133934052 133940179 + Mfap5 protein_coding retained_intron MGP_CBAJ_T0101978.1 MGP_CBAJ_G0040009.1 mouse_genomes_project 6 42699424 42700636 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099437.1 MGP_CBAJ_G0037692.1 mouse_genomes_project 6 76284172 76284327 - Gm23485 snRNA snRNA MGP_CBAJ_T0015100.1 MGP_CBAJ_G0013212.1 mouse_genomes_project 6 46314672 46315569 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008470.1 MGP_CBAJ_G0006839.1 mouse_genomes_project 6 39262120 39264598 - Gm26699 lincRNA lincRNA MGP_CBAJ_T0080550.1 MGP_CBAJ_G0031145.1 mouse_genomes_project 6 160555338 160563121 + MGP_CBAJ_P0080550 Tuba3b protein_coding protein_coding MGP_CBAJ_T0000142.1 MGP_CBAJ_G0000108.1 mouse_genomes_project 6 72479209 72479689 + MGP_CBAJ_P0000142 Igkv11-125 IG_V_gene IG_V_gene MGP_CBAJ_T0000143.1 MGP_CBAJ_G0000108.1 mouse_genomes_project 6 72479209 72479689 + MGP_CBAJ_P0000143 Igkv11-125 IG_V_gene IG_V_gene MGP_CBAJ_T0011525.1 MGP_CBAJ_G0009663.1 mouse_genomes_project 6 54858185 54858546 + Gm27383 misc_RNA misc_RNA MGP_CBAJ_T0000155.1 MGP_CBAJ_G0000118.1 mouse_genomes_project 6 73125202 73125788 + MGP_CBAJ_P0000155 Igkv20-101-2 IG_V_gene IG_V_gene MGP_CBAJ_T0100709.1 MGP_CBAJ_G0038964.1 mouse_genomes_project 6 137040581 137040710 - Gm24175 snoRNA snoRNA MGP_CBAJ_T0015335.1 MGP_CBAJ_G0013447.1 mouse_genomes_project 6 127192935 127194040 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0079510.1 MGP_CBAJ_G0030893.1 mouse_genomes_project 6 134190976 134205633 - MGP_CBAJ_P0079510 Slc2a3 protein_coding protein_coding MGP_CBAJ_T0079511.1 MGP_CBAJ_G0030893.1 mouse_genomes_project 6 134190993 134205410 - Slc2a3 protein_coding retained_intron MGP_CBAJ_T0079512.1 MGP_CBAJ_G0030893.1 mouse_genomes_project 6 134193098 134205278 - MGP_CBAJ_P0079512 Slc2a3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079513.1 MGP_CBAJ_G0030893.1 mouse_genomes_project 6 134194802 134196380 - Slc2a3 protein_coding retained_intron MGP_CBAJ_T0079514.1 MGP_CBAJ_G0030893.1 mouse_genomes_project 6 134200065 134269502 - MGP_CBAJ_P0079514 Slc2a3 protein_coding protein_coding MGP_CBAJ_T0079515.1 MGP_CBAJ_G0030893.1 mouse_genomes_project 6 134200258 134243634 - MGP_CBAJ_P0079515 Slc2a3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079516.1 MGP_CBAJ_G0030893.1 mouse_genomes_project 6 134202813 134205150 - MGP_CBAJ_P0079516 Slc2a3 protein_coding protein_coding MGP_CBAJ_T0079517.1 MGP_CBAJ_G0030893.1 mouse_genomes_project 6 134202872 134205808 - MGP_CBAJ_P0079517 Slc2a3 protein_coding protein_coding MGP_CBAJ_T0099432.1 MGP_CBAJ_G0037687.1 mouse_genomes_project 6 67152373 67152479 - Gm22212 snRNA snRNA MGP_CBAJ_T0076120.1 MGP_CBAJ_G0030170.1 mouse_genomes_project 6 23637589 23645231 + MGP_CBAJ_P0076120 Lmod2 protein_coding protein_coding MGP_CBAJ_T0077037.1 MGP_CBAJ_G0030383.1 mouse_genomes_project 6 50953549 50954961 + MGP_CBAJ_P0077037 Tmem176a protein_coding protein_coding MGP_CBAJ_T0077038.1 MGP_CBAJ_G0030383.1 mouse_genomes_project 6 50954142 50958500 + MGP_CBAJ_P0077038 Tmem176a protein_coding protein_coding MGP_CBAJ_T0077039.1 MGP_CBAJ_G0030383.1 mouse_genomes_project 6 50954152 50959769 + MGP_CBAJ_P0077039 Tmem176a protein_coding nonsense_mediated_decay MGP_CBAJ_T0077040.1 MGP_CBAJ_G0030383.1 mouse_genomes_project 6 50954178 50957992 + Tmem176a protein_coding retained_intron MGP_CBAJ_T0077041.1 MGP_CBAJ_G0030383.1 mouse_genomes_project 6 50954213 50957996 + MGP_CBAJ_P0077041 Tmem176a protein_coding protein_coding MGP_CBAJ_T0077042.1 MGP_CBAJ_G0030383.1 mouse_genomes_project 6 50954400 50957406 + MGP_CBAJ_P0077042 Tmem176a protein_coding protein_coding MGP_CBAJ_T0077043.1 MGP_CBAJ_G0030383.1 mouse_genomes_project 6 50955219 50956223 + MGP_CBAJ_P0077043 Tmem176a protein_coding protein_coding MGP_CBAJ_T0001933.1 MGP_CBAJ_G0001849.1 mouse_genomes_project 6 47116533 47119762 + TEC TEC MGP_CBAJ_T0008574.1 MGP_CBAJ_G0006920.1 mouse_genomes_project 6 99177908 99184191 + Gm45218 lincRNA lincRNA MGP_CBAJ_T0077370.1 MGP_CBAJ_G0030470.1 mouse_genomes_project 6 60957778 61002600 + MGP_CBAJ_P0077370 Lancl2 protein_coding protein_coding MGP_CBAJ_T0077371.1 MGP_CBAJ_G0030470.1 mouse_genomes_project 6 60957874 61001643 + MGP_CBAJ_P0077371 Lancl2 protein_coding protein_coding MGP_CBAJ_T0077372.1 MGP_CBAJ_G0030470.1 mouse_genomes_project 6 60958325 61002599 + MGP_CBAJ_P0077372 Lancl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0076845.1 MGP_CBAJ_G0030332.1 mouse_genomes_project 6 44025973 44026951 + MGP_CBAJ_P0076845 Olfr38 protein_coding protein_coding MGP_CBAJ_T0078146.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93606186 93644330 + MGP_CBAJ_P0078146 Tia1 protein_coding protein_coding MGP_CBAJ_T0078147.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93606186 93642126 + MGP_CBAJ_P0078147 Tia1 protein_coding protein_coding MGP_CBAJ_T0078148.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93606202 93607136 + Tia1 protein_coding retained_intron MGP_CBAJ_T0078149.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93606249 93609073 + Tia1 protein_coding processed_transcript MGP_CBAJ_T0078150.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93606258 93625910 + Tia1 protein_coding retained_intron MGP_CBAJ_T0078151.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93606263 93627717 + Tia1 protein_coding processed_transcript MGP_CBAJ_T0078152.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93606263 93638699 + MGP_CBAJ_P0078152 Tia1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078153.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93606271 93641697 + Tia1 protein_coding retained_intron MGP_CBAJ_T0078154.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93606280 93643110 + MGP_CBAJ_P0078154 Tia1 protein_coding protein_coding MGP_CBAJ_T0078155.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93606281 93641696 + MGP_CBAJ_P0078155 Tia1 protein_coding protein_coding MGP_CBAJ_T0078156.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93606284 93638754 + MGP_CBAJ_P0078156 Tia1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078157.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93606290 93634808 + Tia1 protein_coding processed_transcript MGP_CBAJ_T0078158.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93606292 93644152 + MGP_CBAJ_P0078158 Tia1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078159.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93606303 93627763 + Tia1 protein_coding retained_intron MGP_CBAJ_T0078160.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93606303 93643105 + MGP_CBAJ_P0078160 Tia1 protein_coding protein_coding MGP_CBAJ_T0078161.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93606327 93627798 + Tia1 protein_coding retained_intron MGP_CBAJ_T0078162.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93606440 93636231 + Tia1 protein_coding retained_intron MGP_CBAJ_T0078163.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93621745 93633064 + Tia1 protein_coding retained_intron MGP_CBAJ_T0078164.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93623709 93626373 + Tia1 protein_coding retained_intron MGP_CBAJ_T0078165.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93627127 93634560 + Tia1 protein_coding processed_transcript MGP_CBAJ_T0078166.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93627319 93636455 + Tia1 protein_coding processed_transcript MGP_CBAJ_T0078167.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93627819 93634794 + Tia1 protein_coding retained_intron MGP_CBAJ_T0078168.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93627851 93635368 + Tia1 protein_coding retained_intron MGP_CBAJ_T0078169.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93628177 93638716 + Tia1 protein_coding retained_intron MGP_CBAJ_T0078170.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93629903 93635579 + Tia1 protein_coding retained_intron MGP_CBAJ_T0078171.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93634773 93635939 + Tia1 protein_coding retained_intron MGP_CBAJ_T0078172.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93635945 93636645 + Tia1 protein_coding retained_intron MGP_CBAJ_T0078173.1 MGP_CBAJ_G0030638.1 mouse_genomes_project 6 93636420 93641228 + MGP_CBAJ_P0078173 Tia1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0002011.1 MGP_CBAJ_G0001927.1 mouse_genomes_project 6 93716312 93719478 + TEC TEC MGP_CBAJ_T0008592.1 MGP_CBAJ_G0006933.1 mouse_genomes_project 6 114732489 114736335 - lincRNA lincRNA MGP_CBAJ_T0076049.1 MGP_CBAJ_G0030153.1 mouse_genomes_project 6 19844123 20436733 + MGP_CBAJ_P0076049 Kcnd2 protein_coding protein_coding MGP_CBAJ_T0077161.1 MGP_CBAJ_G0030413.1 mouse_genomes_project 6 54780743 54784165 - MGP_CBAJ_P0077161 Hoxa6 protein_coding protein_coding MGP_CBAJ_T0076137.1 MGP_CBAJ_G0030178.1 mouse_genomes_project 6 24892866 24969618 - MGP_CBAJ_P0076137 Pot1a protein_coding protein_coding MGP_CBAJ_T0076138.1 MGP_CBAJ_G0030178.1 mouse_genomes_project 6 24893627 24895299 - Pot1a protein_coding retained_intron MGP_CBAJ_T0076139.1 MGP_CBAJ_G0030178.1 mouse_genomes_project 6 24893707 24955510 - MGP_CBAJ_P0076139 Pot1a protein_coding protein_coding MGP_CBAJ_T0076140.1 MGP_CBAJ_G0030178.1 mouse_genomes_project 6 24899250 24969618 - Pot1a protein_coding retained_intron MGP_CBAJ_T0076141.1 MGP_CBAJ_G0030178.1 mouse_genomes_project 6 24908006 24969586 - MGP_CBAJ_P0076141 Pot1a protein_coding protein_coding MGP_CBAJ_T0076142.1 MGP_CBAJ_G0030178.1 mouse_genomes_project 6 24926015 24969614 - Pot1a protein_coding processed_transcript MGP_CBAJ_T0076143.1 MGP_CBAJ_G0030178.1 mouse_genomes_project 6 24950730 24969638 - Pot1a protein_coding retained_intron MGP_CBAJ_T0076144.1 MGP_CBAJ_G0030178.1 mouse_genomes_project 6 24956020 24969608 - Pot1a protein_coding retained_intron MGP_CBAJ_T0076145.1 MGP_CBAJ_G0030178.1 mouse_genomes_project 6 24957808 24961913 - Pot1a protein_coding processed_transcript MGP_CBAJ_T0015056.1 MGP_CBAJ_G0013168.1 mouse_genomes_project 6 21615005 21616191 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004883.1 MGP_CBAJ_G0004184.1 mouse_genomes_project 6 57537025 57538013 - Gm28402 antisense antisense MGP_CBAJ_T0015153.1 MGP_CBAJ_G0013265.1 mouse_genomes_project 6 66163822 66165358 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002085.1 MGP_CBAJ_G0002001.1 mouse_genomes_project 6 123922913 123925401 - TEC TEC MGP_CBAJ_T0078886.1 MGP_CBAJ_G0030783.1 mouse_genomes_project 6 123532980 123542746 + MGP_CBAJ_P0078886 Ogg1 protein_coding protein_coding MGP_CBAJ_T0078887.1 MGP_CBAJ_G0030783.1 mouse_genomes_project 6 123532993 123537398 + Ogg1 protein_coding retained_intron MGP_CBAJ_T0078888.1 MGP_CBAJ_G0030783.1 mouse_genomes_project 6 123533007 123542742 + MGP_CBAJ_P0078888 Ogg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078889.1 MGP_CBAJ_G0030783.1 mouse_genomes_project 6 123533016 123537905 + Ogg1 protein_coding processed_transcript MGP_CBAJ_T0078890.1 MGP_CBAJ_G0030783.1 mouse_genomes_project 6 123533021 123542544 + MGP_CBAJ_P0078890 Ogg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078891.1 MGP_CBAJ_G0030783.1 mouse_genomes_project 6 123533119 123537529 + Ogg1 protein_coding retained_intron MGP_CBAJ_T0078892.1 MGP_CBAJ_G0030783.1 mouse_genomes_project 6 123541876 123543626 + Ogg1 protein_coding retained_intron MGP_CBAJ_T0004961.1 MGP_CBAJ_G0004232.1 mouse_genomes_project 6 106414406 106550521 + Gm32592 antisense antisense MGP_CBAJ_T0002114.1 MGP_CBAJ_G0002029.1 mouse_genomes_project 6 142073132 142077133 + TEC TEC MGP_CBAJ_T0076114.1 MGP_CBAJ_G0030168.1 mouse_genomes_project 6 23542512 23548404 - Ndufa5 protein_coding retained_intron MGP_CBAJ_T0076115.1 MGP_CBAJ_G0030168.1 mouse_genomes_project 6 23542512 23553108 - MGP_CBAJ_P0076115 Ndufa5 protein_coding protein_coding MGP_CBAJ_T0076116.1 MGP_CBAJ_G0030168.1 mouse_genomes_project 6 23542512 23553551 - MGP_CBAJ_P0076116 Ndufa5 protein_coding protein_coding MGP_CBAJ_T0076117.1 MGP_CBAJ_G0030168.1 mouse_genomes_project 6 23542513 23553064 - Ndufa5 protein_coding processed_transcript MGP_CBAJ_T0076537.1 MGP_CBAJ_G0030243.1 mouse_genomes_project 6 35470350 35560129 + MGP_CBAJ_P0076537 Nup205 protein_coding protein_coding MGP_CBAJ_T0076538.1 MGP_CBAJ_G0030243.1 mouse_genomes_project 6 35470359 35560129 + MGP_CBAJ_P0076538 Nup205 protein_coding protein_coding MGP_CBAJ_T0076539.1 MGP_CBAJ_G0030243.1 mouse_genomes_project 6 35470545 35505252 + Nup205 protein_coding retained_intron MGP_CBAJ_T0076540.1 MGP_CBAJ_G0030243.1 mouse_genomes_project 6 35470558 35560123 + MGP_CBAJ_P0076540 Nup205 protein_coding protein_coding MGP_CBAJ_T0076541.1 MGP_CBAJ_G0030243.1 mouse_genomes_project 6 35504645 35560129 + Nup205 protein_coding processed_transcript MGP_CBAJ_T0076542.1 MGP_CBAJ_G0030243.1 mouse_genomes_project 6 35525785 35547375 + Nup205 protein_coding retained_intron MGP_CBAJ_T0076543.1 MGP_CBAJ_G0030243.1 mouse_genomes_project 6 35555472 35559006 + Nup205 protein_coding retained_intron MGP_CBAJ_T0015234.1 MGP_CBAJ_G0013346.1 mouse_genomes_project 6 85239870 85240579 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099414.1 MGP_CBAJ_G0037669.1 mouse_genomes_project 6 15638724 15638829 + Gm25021 snRNA snRNA MGP_CBAJ_T0008610.1 MGP_CBAJ_G0006949.1 mouse_genomes_project 6 128606608 128606929 + Gm29509 lincRNA lincRNA MGP_CBAJ_T0015124.1 MGP_CBAJ_G0013236.1 mouse_genomes_project 6 52144016 52146972 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011526.1 MGP_CBAJ_G0009664.1 mouse_genomes_project 6 54861709 54861880 + Gm27866 misc_RNA misc_RNA MGP_CBAJ_T0011538.1 MGP_CBAJ_G0009676.1 mouse_genomes_project 6 122017280 122017595 + Gm26362 misc_RNA misc_RNA MGP_CBAJ_T0079563.1 MGP_CBAJ_G0030912.1 mouse_genomes_project 6 136064321 136073763 - MGP_CBAJ_P0079563 1700013D24Rik protein_coding protein_coding MGP_CBAJ_T0079564.1 MGP_CBAJ_G0030912.1 mouse_genomes_project 6 136064326 136073746 - 1700013D24Rik protein_coding lincRNA MGP_CBAJ_T0001989.1 MGP_CBAJ_G0001905.1 mouse_genomes_project 6 83793712 83796507 - TEC TEC MGP_CBAJ_T0078353.1 MGP_CBAJ_G0030676.1 mouse_genomes_project 6 96097917 96099490 + Mgll protein_coding processed_transcript MGP_CBAJ_T0078354.1 MGP_CBAJ_G0030676.1 mouse_genomes_project 6 96097928 96197035 + MGP_CBAJ_P0078354 Mgll protein_coding nonsense_mediated_decay MGP_CBAJ_T0078355.1 MGP_CBAJ_G0030676.1 mouse_genomes_project 6 96097941 96199640 + MGP_CBAJ_P0078355 Mgll protein_coding protein_coding MGP_CBAJ_T0078356.1 MGP_CBAJ_G0030676.1 mouse_genomes_project 6 96098043 96140184 + MGP_CBAJ_P0078356 Mgll protein_coding protein_coding MGP_CBAJ_T0078357.1 MGP_CBAJ_G0030676.1 mouse_genomes_project 6 96098524 96199524 + MGP_CBAJ_P0078357 Mgll protein_coding nonsense_mediated_decay MGP_CBAJ_T0078358.1 MGP_CBAJ_G0030676.1 mouse_genomes_project 6 96098598 96202012 + MGP_CBAJ_P0078358 Mgll protein_coding protein_coding MGP_CBAJ_T0078359.1 MGP_CBAJ_G0030676.1 mouse_genomes_project 6 96196781 96199483 + Mgll protein_coding retained_intron MGP_CBAJ_T0002150.1 MGP_CBAJ_G0002065.1 mouse_genomes_project 6 164100771 164102432 + TEC TEC MGP_CBAJ_T0011544.1 MGP_CBAJ_G0009682.1 mouse_genomes_project 6 154861673 154861926 + Gm25780 misc_RNA misc_RNA MGP_CBAJ_T0004869.1 MGP_CBAJ_G0004176.1 mouse_genomes_project 6 54725643 54727273 + Hotairm1 antisense antisense MGP_CBAJ_T0004870.1 MGP_CBAJ_G0004176.1 mouse_genomes_project 6 54727176 54730852 + Hotairm1 antisense antisense MGP_CBAJ_T0004871.1 MGP_CBAJ_G0004176.1 mouse_genomes_project 6 54727268 54730753 + Hotairm1 antisense antisense MGP_CBAJ_T0008547.1 MGP_CBAJ_G0006900.1 mouse_genomes_project 6 91466722 91467168 + 4930504D19Rik lincRNA lincRNA MGP_CBAJ_T0076694.1 MGP_CBAJ_G0030277.1 mouse_genomes_project 6 40744756 40757273 - MGP_CBAJ_P0076694 Mrps33 protein_coding protein_coding MGP_CBAJ_T0076695.1 MGP_CBAJ_G0030277.1 mouse_genomes_project 6 40746687 40757170 - MGP_CBAJ_P0076695 Mrps33 protein_coding protein_coding MGP_CBAJ_T0076696.1 MGP_CBAJ_G0030277.1 mouse_genomes_project 6 40746879 40750546 - MGP_CBAJ_P0076696 Mrps33 protein_coding protein_coding MGP_CBAJ_T0076697.1 MGP_CBAJ_G0030277.1 mouse_genomes_project 6 40749745 40757178 - Mrps33 protein_coding retained_intron MGP_CBAJ_T0002138.1 MGP_CBAJ_G0002053.1 mouse_genomes_project 6 160026526 160029701 - TEC TEC MGP_CBAJ_T0010630.1 MGP_CBAJ_G0008768.1 mouse_genomes_project 6 29907992 29908098 - Mir96 miRNA miRNA MGP_CBAJ_T0076828.1 MGP_CBAJ_G0030325.1 mouse_genomes_project 6 43723694 43751004 - MGP_CBAJ_P0076828 Olfr456 protein_coding protein_coding MGP_CBAJ_T0076165.1 MGP_CBAJ_G0030183.1 mouse_genomes_project 6 27917476 27929870 + MGP_CBAJ_P0076165 Fscn3 protein_coding protein_coding MGP_CBAJ_T0076166.1 MGP_CBAJ_G0030183.1 mouse_genomes_project 6 27923744 27925342 + Fscn3 protein_coding processed_transcript MGP_CBAJ_T0015317.1 MGP_CBAJ_G0013429.1 mouse_genomes_project 6 122670490 122672056 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0077802.1 MGP_CBAJ_G0030574.1 mouse_genomes_project 6 89635130 89725653 + MGP_CBAJ_P0077802 M1ap protein_coding protein_coding MGP_CBAJ_T0077803.1 MGP_CBAJ_G0030574.1 mouse_genomes_project 6 89721809 89725779 + MGP_CBAJ_P0077803 M1ap protein_coding protein_coding MGP_CBAJ_T0077804.1 MGP_CBAJ_G0030574.1 mouse_genomes_project 6 89723720 89725293 + M1ap protein_coding retained_intron MGP_CBAJ_T0015269.1 MGP_CBAJ_G0013381.1 mouse_genomes_project 6 100228565 100229562 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101969.1 MGP_CBAJ_G0040000.1 mouse_genomes_project 6 13620 22644 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0077355.1 MGP_CBAJ_G0030462.1 mouse_genomes_project 6 60459489 60460389 + MGP_CBAJ_P0077355 Vmn1r15 protein_coding protein_coding MGP_CBAJ_T0000183.1 MGP_CBAJ_G0000138.1 mouse_genomes_project 6 74693176 74693771 - MGP_CBAJ_P0000183 IG_V_gene IG_V_gene MGP_CBAJ_T0001907.1 MGP_CBAJ_G0001823.1 mouse_genomes_project 6 31011831 31013925 - TEC TEC MGP_CBAJ_T0004949.1 MGP_CBAJ_G0004225.1 mouse_genomes_project 6 96696164 96719325 + Gm26811 antisense antisense MGP_CBAJ_T0015120.1 MGP_CBAJ_G0013232.1 mouse_genomes_project 6 51495685 51496250 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0004887.1 MGP_CBAJ_G0004188.1 mouse_genomes_project 6 67277766 67282000 - Gm44071 antisense antisense MGP_CBAJ_T0008420.1 MGP_CBAJ_G0006810.1 mouse_genomes_project 6 25112200 25165966 + Gm20756 lincRNA lincRNA MGP_CBAJ_T0008421.1 MGP_CBAJ_G0006810.1 mouse_genomes_project 6 25139628 25143323 + Gm20756 lincRNA lincRNA MGP_CBAJ_T0078812.1 MGP_CBAJ_G0030773.1 mouse_genomes_project 6 122551519 122567680 + MGP_CBAJ_P0078812 Cav3 protein_coding protein_coding MGP_CBAJ_T0004843.1 MGP_CBAJ_G0004154.1 mouse_genomes_project 6 32503231 32507735 + Plxna4os1 antisense antisense MGP_CBAJ_T0010633.1 MGP_CBAJ_G0008771.1 mouse_genomes_project 6 30965399 30965487 - Mir29a miRNA miRNA MGP_CBAJ_T0097829.1 MGP_CBAJ_G0036102.1 mouse_genomes_project 6 75299122 75299352 + pseudogene pseudogene MGP_CBAJ_T0079518.1 MGP_CBAJ_G0030894.1 mouse_genomes_project 6 134290403 134323995 + MGP_CBAJ_P0079518 Foxj2 protein_coding protein_coding MGP_CBAJ_T0079519.1 MGP_CBAJ_G0030894.1 mouse_genomes_project 6 134291000 134323970 + MGP_CBAJ_P0079519 Foxj2 protein_coding protein_coding MGP_CBAJ_T0079520.1 MGP_CBAJ_G0030894.1 mouse_genomes_project 6 134297172 134308831 + MGP_CBAJ_P0079520 Foxj2 protein_coding protein_coding MGP_CBAJ_T0100702.1 MGP_CBAJ_G0038957.1 mouse_genomes_project 6 135432062 135432179 - Gm23079 snoRNA snoRNA MGP_CBAJ_T0102012.1 MGP_CBAJ_G0040043.1 mouse_genomes_project 6 97200878 97201863 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0078026.1 MGP_CBAJ_G0030612.1 mouse_genomes_project 6 91554348 92047402 - MGP_CBAJ_P0078026 Exoc6b protein_coding protein_coding MGP_CBAJ_T0078027.1 MGP_CBAJ_G0030612.1 mouse_genomes_project 6 91776589 92047402 - Exoc6b protein_coding retained_intron MGP_CBAJ_T0078028.1 MGP_CBAJ_G0030612.1 mouse_genomes_project 6 91777464 92047346 - Exoc6b protein_coding retained_intron MGP_CBAJ_T0078029.1 MGP_CBAJ_G0030612.1 mouse_genomes_project 6 91799756 92047391 - MGP_CBAJ_P0078029 Exoc6b protein_coding nonsense_mediated_decay MGP_CBAJ_T0078030.1 MGP_CBAJ_G0030612.1 mouse_genomes_project 6 91839182 91843185 - Exoc6b protein_coding retained_intron MGP_CBAJ_T0078031.1 MGP_CBAJ_G0030612.1 mouse_genomes_project 6 91906250 92047391 - Exoc6b protein_coding processed_transcript MGP_CBAJ_T0078032.1 MGP_CBAJ_G0030612.1 mouse_genomes_project 6 91951623 92047357 - Exoc6b protein_coding retained_intron MGP_CBAJ_T0078033.1 MGP_CBAJ_G0030612.1 mouse_genomes_project 6 91974669 92047364 - Exoc6b protein_coding retained_intron MGP_CBAJ_T0075974.1 MGP_CBAJ_G0030142.1 mouse_genomes_project 6 15470000 15477588 + MGP_CBAJ_P0075974 Cav2 protein_coding protein_coding MGP_CBAJ_T0075975.1 MGP_CBAJ_G0030142.1 mouse_genomes_project 6 15470142 15471500 + MGP_CBAJ_P0075975 Cav2 protein_coding protein_coding MGP_CBAJ_T0075976.1 MGP_CBAJ_G0030142.1 mouse_genomes_project 6 15470174 15476254 + MGP_CBAJ_P0075976 Cav2 protein_coding protein_coding MGP_CBAJ_T0002042.1 MGP_CBAJ_G0001958.1 mouse_genomes_project 6 98705573 98706167 - TEC TEC MGP_CBAJ_T0002048.1 MGP_CBAJ_G0001964.1 mouse_genomes_project 6 99306383 99308326 - TEC TEC MGP_CBAJ_T0075958.1 MGP_CBAJ_G0030139.1 mouse_genomes_project 6 13713106 13800276 + MGP_CBAJ_P0075958 Mdfic protein_coding protein_coding MGP_CBAJ_T0075959.1 MGP_CBAJ_G0030139.1 mouse_genomes_project 6 13713106 13800280 + MGP_CBAJ_P0075959 Mdfic protein_coding protein_coding MGP_CBAJ_T0075960.1 MGP_CBAJ_G0030139.1 mouse_genomes_project 6 13713148 13765239 + MGP_CBAJ_P0075960 Mdfic protein_coding nonsense_mediated_decay MGP_CBAJ_T0075961.1 MGP_CBAJ_G0030139.1 mouse_genomes_project 6 13713166 13767308 + MGP_CBAJ_P0075961 Mdfic protein_coding protein_coding MGP_CBAJ_T0075962.1 MGP_CBAJ_G0030139.1 mouse_genomes_project 6 13713532 13798919 + MGP_CBAJ_P0075962 Mdfic protein_coding protein_coding MGP_CBAJ_T0075963.1 MGP_CBAJ_G0030139.1 mouse_genomes_project 6 13720232 13764353 + MGP_CBAJ_P0075963 Mdfic protein_coding protein_coding MGP_CBAJ_T0079450.1 MGP_CBAJ_G0030881.1 mouse_genomes_project 6 132559562 132669508 - MGP_CBAJ_P0079450 Iqsec3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079451.1 MGP_CBAJ_G0030881.1 mouse_genomes_project 6 132559562 132669466 - MGP_CBAJ_P0079451 Iqsec3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0079452.1 MGP_CBAJ_G0030881.1 mouse_genomes_project 6 132559562 132669521 - MGP_CBAJ_P0079452 Iqsec3 protein_coding protein_coding MGP_CBAJ_T0079453.1 MGP_CBAJ_G0030881.1 mouse_genomes_project 6 132566439 132669406 - MGP_CBAJ_P0079453 Iqsec3 protein_coding unknown_likely_coding MGP_CBAJ_T0079454.1 MGP_CBAJ_G0030881.1 mouse_genomes_project 6 132593753 132669521 - MGP_CBAJ_P0079454 Iqsec3 protein_coding protein_coding MGP_CBAJ_T0015031.1 MGP_CBAJ_G0013143.1 mouse_genomes_project 6 11217795 11218292 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000295.1 MGP_CBAJ_G0000240.1 mouse_genomes_project 6 74791798 74792365 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0102034.1 MGP_CBAJ_G0040064.1 mouse_genomes_project 6 143967745 143987976 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0098082.1 MGP_CBAJ_G0036355.1 mouse_genomes_project 6 159906871 159906986 - Gm23071 rRNA rRNA MGP_CBAJ_T0015078.1 MGP_CBAJ_G0013190.1 mouse_genomes_project 6 38466305 38467030 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000287.1 MGP_CBAJ_G0000232.1 mouse_genomes_project 6 74075187 74075720 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0099429.1 MGP_CBAJ_G0037684.1 mouse_genomes_project 6 44085031 44085137 + Gm23982 snRNA snRNA MGP_CBAJ_T0000175.1 MGP_CBAJ_G0000132.1 mouse_genomes_project 6 73626354 73626882 - MGP_CBAJ_P0000175 Igkv4-86 IG_V_gene IG_V_gene MGP_CBAJ_T0000176.1 MGP_CBAJ_G0000132.1 mouse_genomes_project 6 73626354 73626917 - MGP_CBAJ_P0000176 Igkv4-86 IG_V_gene IG_V_gene MGP_CBAJ_T0080400.1 MGP_CBAJ_G0031118.1 mouse_genomes_project 6 156205430 156278416 - MGP_CBAJ_P0080400 Gm5724 protein_coding protein_coding MGP_CBAJ_T0076874.1 MGP_CBAJ_G0030348.1 mouse_genomes_project 6 44682286 44688167 - MGP_CBAJ_P0076874 Nobox protein_coding protein_coding MGP_CBAJ_T0076875.1 MGP_CBAJ_G0030348.1 mouse_genomes_project 6 44682312 44683748 - Nobox protein_coding processed_transcript MGP_CBAJ_T0076876.1 MGP_CBAJ_G0030348.1 mouse_genomes_project 6 44682510 44685849 - MGP_CBAJ_P0076876 Nobox protein_coding protein_coding MGP_CBAJ_T0077491.1 MGP_CBAJ_G0030504.1 mouse_genomes_project 6 70986423 70987553 - MGP_CBAJ_P0077491 protein_coding protein_coding MGP_CBAJ_T0002098.1 MGP_CBAJ_G0002013.1 mouse_genomes_project 6 132364634 132366143 - TEC TEC MGP_CBAJ_T0101169.1 MGP_CBAJ_G0039345.1 mouse_genomes_project 6 134389528 134392624 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101170.1 MGP_CBAJ_G0039345.1 mouse_genomes_project 6 134389943 134390213 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0079716.1 MGP_CBAJ_G0030942.1 mouse_genomes_project 6 136734242 136740660 + MGP_CBAJ_P0079716 Pianp protein_coding protein_coding MGP_CBAJ_T0079717.1 MGP_CBAJ_G0030942.1 mouse_genomes_project 6 136734425 136740660 + MGP_CBAJ_P0079717 Pianp protein_coding protein_coding MGP_CBAJ_T0079718.1 MGP_CBAJ_G0030942.1 mouse_genomes_project 6 136734638 136737295 + MGP_CBAJ_P0079718 Pianp protein_coding protein_coding MGP_CBAJ_T0079719.1 MGP_CBAJ_G0030942.1 mouse_genomes_project 6 136736000 136740660 + MGP_CBAJ_P0079719 Pianp protein_coding protein_coding MGP_CBAJ_T0079720.1 MGP_CBAJ_G0030942.1 mouse_genomes_project 6 136736173 136739707 + MGP_CBAJ_P0079720 Pianp protein_coding protein_coding MGP_CBAJ_T0079721.1 MGP_CBAJ_G0030942.1 mouse_genomes_project 6 136736202 136737009 + MGP_CBAJ_P0079721 Pianp protein_coding protein_coding MGP_CBAJ_T0079722.1 MGP_CBAJ_G0030942.1 mouse_genomes_project 6 136737225 136738613 + MGP_CBAJ_P0079722 Pianp protein_coding protein_coding MGP_CBAJ_T0076275.1 MGP_CBAJ_G0030203.1 mouse_genomes_project 6 29366762 29396247 + MGP_CBAJ_P0076275 Tspan33 protein_coding protein_coding MGP_CBAJ_T0076276.1 MGP_CBAJ_G0030203.1 mouse_genomes_project 6 29366774 29396245 + MGP_CBAJ_P0076276 Tspan33 protein_coding protein_coding MGP_CBAJ_T0076277.1 MGP_CBAJ_G0030203.1 mouse_genomes_project 6 29380083 29386894 + Tspan33 protein_coding retained_intron MGP_CBAJ_T0078973.1 MGP_CBAJ_G0030800.1 mouse_genomes_project 6 123881509 123946141 + MGP_CBAJ_P0078973 Irak2 protein_coding protein_coding MGP_CBAJ_T0078974.1 MGP_CBAJ_G0030800.1 mouse_genomes_project 6 123881530 123944912 + MGP_CBAJ_P0078974 Irak2 protein_coding protein_coding MGP_CBAJ_T0078975.1 MGP_CBAJ_G0030800.1 mouse_genomes_project 6 123881543 123912006 + Irak2 protein_coding retained_intron MGP_CBAJ_T0078976.1 MGP_CBAJ_G0030800.1 mouse_genomes_project 6 123881578 123919007 + MGP_CBAJ_P0078976 Irak2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0078977.1 MGP_CBAJ_G0030800.1 mouse_genomes_project 6 123914823 123918913 + Irak2 protein_coding processed_transcript MGP_CBAJ_T0078978.1 MGP_CBAJ_G0030800.1 mouse_genomes_project 6 123915751 123944912 + Irak2 protein_coding retained_intron MGP_CBAJ_T0078979.1 MGP_CBAJ_G0030800.1 mouse_genomes_project 6 123939537 123945027 + Irak2 protein_coding retained_intron MGP_CBAJ_T0078980.1 MGP_CBAJ_G0030800.1 mouse_genomes_project 6 123943844 123945121 + Irak2 protein_coding processed_transcript MGP_CBAJ_T0015266.1 MGP_CBAJ_G0013378.1 mouse_genomes_project 6 99170577 99170972 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0076047.1 MGP_CBAJ_G0030152.1 mouse_genomes_project 6 17257867 17272191 + MGP_CBAJ_P0076047 Ankrd7 protein_coding protein_coding MGP_CBAJ_T0076048.1 MGP_CBAJ_G0030152.1 mouse_genomes_project 6 17257899 17272187 + MGP_CBAJ_P0076048 Ankrd7 protein_coding protein_coding MGP_CBAJ_T0010671.1 MGP_CBAJ_G0008809.1 mouse_genomes_project 6 116938705 116938831 - Gm27690 miRNA miRNA MGP_CBAJ_T0015036.1 MGP_CBAJ_G0013148.1 mouse_genomes_project 6 14124526 14124800 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0078050.1 MGP_CBAJ_G0030617.1 mouse_genomes_project 6 92370260 92409127 - MGP_CBAJ_P0078050 protein_coding protein_coding MGP_CBAJ_T0078051.1 MGP_CBAJ_G0030617.1 mouse_genomes_project 6 92370265 92409197 - MGP_CBAJ_P0078051 protein_coding protein_coding MGP_CBAJ_T0078052.1 MGP_CBAJ_G0030617.1 mouse_genomes_project 6 92372926 92376936 - protein_coding processed_transcript MGP_CBAJ_T0080651.1 MGP_CBAJ_G0031166.1 mouse_genomes_project 6 163390876 163424080 - MGP_CBAJ_P0080651 Ergic2 protein_coding protein_coding MGP_CBAJ_T0080652.1 MGP_CBAJ_G0031166.1 mouse_genomes_project 6 163393013 163423813 - MGP_CBAJ_P0080652 Ergic2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080653.1 MGP_CBAJ_G0031166.1 mouse_genomes_project 6 163393107 163399841 - MGP_CBAJ_P0080653 Ergic2 protein_coding protein_coding MGP_CBAJ_T0080654.1 MGP_CBAJ_G0031166.1 mouse_genomes_project 6 163393162 163395006 - MGP_CBAJ_P0080654 Ergic2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080655.1 MGP_CBAJ_G0031166.1 mouse_genomes_project 6 163393442 163407000 - MGP_CBAJ_P0080655 Ergic2 protein_coding protein_coding MGP_CBAJ_T0080656.1 MGP_CBAJ_G0031166.1 mouse_genomes_project 6 163393725 163407985 - Ergic2 protein_coding retained_intron MGP_CBAJ_T0080657.1 MGP_CBAJ_G0031166.1 mouse_genomes_project 6 163394843 163401455 - Ergic2 protein_coding retained_intron MGP_CBAJ_T0080658.1 MGP_CBAJ_G0031166.1 mouse_genomes_project 6 163395495 163424080 - Ergic2 protein_coding processed_transcript MGP_CBAJ_T0080659.1 MGP_CBAJ_G0031166.1 mouse_genomes_project 6 163399785 163408270 - Ergic2 protein_coding retained_intron MGP_CBAJ_T0080660.1 MGP_CBAJ_G0031166.1 mouse_genomes_project 6 163401248 163406983 - Ergic2 protein_coding processed_transcript MGP_CBAJ_T0080661.1 MGP_CBAJ_G0031166.1 mouse_genomes_project 6 163401294 163423728 - MGP_CBAJ_P0080661 Ergic2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080662.1 MGP_CBAJ_G0031166.1 mouse_genomes_project 6 163402667 163408087 - Ergic2 protein_coding processed_transcript MGP_CBAJ_T0080663.1 MGP_CBAJ_G0031166.1 mouse_genomes_project 6 163406937 163414493 - Ergic2 protein_coding retained_intron MGP_CBAJ_T0080664.1 MGP_CBAJ_G0031166.1 mouse_genomes_project 6 163410660 163423683 - Ergic2 protein_coding retained_intron MGP_CBAJ_T0080665.1 MGP_CBAJ_G0031166.1 mouse_genomes_project 6 163413195 163423728 - MGP_CBAJ_P0080665 Ergic2 protein_coding protein_coding MGP_CBAJ_T0080666.1 MGP_CBAJ_G0031166.1 mouse_genomes_project 6 163413950 163423727 - Ergic2 protein_coding retained_intron MGP_CBAJ_T0080667.1 MGP_CBAJ_G0031166.1 mouse_genomes_project 6 163414403 163423711 - Ergic2 protein_coding processed_transcript MGP_CBAJ_T0011528.1 MGP_CBAJ_G0009666.1 mouse_genomes_project 6 90358864 90359187 - Gm24990 misc_RNA misc_RNA MGP_CBAJ_T0001978.1 MGP_CBAJ_G0001894.1 mouse_genomes_project 6 78325268 78328302 - TEC TEC MGP_CBAJ_T0008552.1 MGP_CBAJ_G0006904.1 mouse_genomes_project 6 93738074 93740440 - Gm44386 lincRNA lincRNA MGP_CBAJ_T0002135.1 MGP_CBAJ_G0002050.1 mouse_genomes_project 6 155818086 155821921 + TEC TEC MGP_CBAJ_T0098436.1 MGP_CBAJ_G0036698.1 mouse_genomes_project 6 50021179 50021587 - sense_intronic sense_intronic MGP_CBAJ_T0097828.1 MGP_CBAJ_G0036101.1 mouse_genomes_project 6 73443500 73443782 - pseudogene pseudogene MGP_CBAJ_T0078523.1 MGP_CBAJ_G0030714.1 mouse_genomes_project 6 99059885 99086469 - MGP_CBAJ_P0078523 Xpc protein_coding protein_coding MGP_CBAJ_T0078524.1 MGP_CBAJ_G0030714.1 mouse_genomes_project 6 99062853 99086376 - MGP_CBAJ_P0078524 Xpc protein_coding nonsense_mediated_decay MGP_CBAJ_T0078525.1 MGP_CBAJ_G0030714.1 mouse_genomes_project 6 99077496 99086465 - MGP_CBAJ_P0078525 Xpc protein_coding protein_coding MGP_CBAJ_T0076746.1 MGP_CBAJ_G0030294.1 mouse_genomes_project 6 42041797 42045293 - MGP_CBAJ_P0076746 Gm4744 protein_coding protein_coding MGP_CBAJ_T0079559.1 MGP_CBAJ_G0030910.1 mouse_genomes_project 6 135910010 135942825 - MGP_CBAJ_P0079559 Vmn2r27 protein_coding protein_coding MGP_CBAJ_T0079983.1 MGP_CBAJ_G0030997.1 mouse_genomes_project 6 141048979 141050943 - Klrb1 protein_coding processed_transcript MGP_CBAJ_T0079984.1 MGP_CBAJ_G0030997.1 mouse_genomes_project 6 141049593 141073101 - MGP_CBAJ_P0079984 Klrb1 protein_coding protein_coding MGP_CBAJ_T0015396.1 MGP_CBAJ_G0013508.1 mouse_genomes_project 6 144167399 144168136 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015313.1 MGP_CBAJ_G0013425.1 mouse_genomes_project 6 119791518 119792062 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015115.1 MGP_CBAJ_G0013227.1 mouse_genomes_project 6 51128716 51129806 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0080004.1 MGP_CBAJ_G0031003.1 mouse_genomes_project 6 141571056 141581056 - MGP_CBAJ_P0080004 Clec2e protein_coding protein_coding MGP_CBAJ_T0002262.1 MGP_CBAJ_G0002176.1 mouse_genomes_project 7 136097809 136099156 + TEC TEC MGP_CBAJ_T0085138.1 MGP_CBAJ_G0032405.1 mouse_genomes_project 7 116329160 116330099 + MGP_CBAJ_P0085138 Olfr677 protein_coding protein_coding MGP_CBAJ_T0081156.1 MGP_CBAJ_G0031309.1 mouse_genomes_project 7 10930119 10943945 - MGP_CBAJ_P0081156 Zfp329 protein_coding protein_coding MGP_CBAJ_T0081157.1 MGP_CBAJ_G0031309.1 mouse_genomes_project 7 10930124 10943949 - MGP_CBAJ_P0081157 Zfp329 protein_coding protein_coding MGP_CBAJ_T0081158.1 MGP_CBAJ_G0031309.1 mouse_genomes_project 7 10931209 10933233 - Zfp329 protein_coding processed_transcript MGP_CBAJ_T0081159.1 MGP_CBAJ_G0031309.1 mouse_genomes_project 7 10931259 10943943 - MGP_CBAJ_P0081159 Zfp329 protein_coding protein_coding MGP_CBAJ_T0084784.1 MGP_CBAJ_G0032242.1 mouse_genomes_project 7 111164976 111179193 - MGP_CBAJ_P0084784 Plekhb1 protein_coding protein_coding MGP_CBAJ_T0084785.1 MGP_CBAJ_G0032242.1 mouse_genomes_project 7 111164979 111183120 - MGP_CBAJ_P0084785 Plekhb1 protein_coding protein_coding MGP_CBAJ_T0084786.1 MGP_CBAJ_G0032242.1 mouse_genomes_project 7 111164979 111177748 - MGP_CBAJ_P0084786 Plekhb1 protein_coding protein_coding MGP_CBAJ_T0084787.1 MGP_CBAJ_G0032242.1 mouse_genomes_project 7 111164979 111183071 - MGP_CBAJ_P0084787 Plekhb1 protein_coding protein_coding MGP_CBAJ_T0084788.1 MGP_CBAJ_G0032242.1 mouse_genomes_project 7 111164983 111179225 - MGP_CBAJ_P0084788 Plekhb1 protein_coding protein_coding MGP_CBAJ_T0084789.1 MGP_CBAJ_G0032242.1 mouse_genomes_project 7 111165887 111174570 - Plekhb1 protein_coding retained_intron MGP_CBAJ_T0084790.1 MGP_CBAJ_G0032242.1 mouse_genomes_project 7 111166029 111183021 - MGP_CBAJ_P0084790 Plekhb1 protein_coding protein_coding MGP_CBAJ_T0084791.1 MGP_CBAJ_G0032242.1 mouse_genomes_project 7 111166651 111177871 - MGP_CBAJ_P0084791 Plekhb1 protein_coding protein_coding MGP_CBAJ_T0084792.1 MGP_CBAJ_G0032242.1 mouse_genomes_project 7 111166719 111179191 - MGP_CBAJ_P0084792 Plekhb1 protein_coding protein_coding MGP_CBAJ_T0005203.1 MGP_CBAJ_G0004409.1 mouse_genomes_project 7 135084449 135085388 + 1700069B07Rik antisense antisense MGP_CBAJ_T0005204.1 MGP_CBAJ_G0004409.1 mouse_genomes_project 7 135084563 135085386 + 1700069B07Rik antisense antisense MGP_CBAJ_T0083365.1 MGP_CBAJ_G0031896.1 mouse_genomes_project 7 49592321 49618494 - MGP_CBAJ_P0083365 Dhdh protein_coding protein_coding MGP_CBAJ_T0083366.1 MGP_CBAJ_G0031896.1 mouse_genomes_project 7 49599402 49606235 - Dhdh protein_coding processed_transcript MGP_CBAJ_T0015506.1 MGP_CBAJ_G0013618.1 mouse_genomes_project 7 23936155 23936464 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0081885.1 MGP_CBAJ_G0031533.1 mouse_genomes_project 7 25483428 25542499 + MGP_CBAJ_P0081885 Megf8 protein_coding protein_coding MGP_CBAJ_T0081886.1 MGP_CBAJ_G0031533.1 mouse_genomes_project 7 25522464 25542496 + Megf8 protein_coding retained_intron MGP_CBAJ_T0102133.1 MGP_CBAJ_G0040162.1 mouse_genomes_project 7 47817976 48121914 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0086670.1 MGP_CBAJ_G0032769.1 mouse_genomes_project 7 146009441 146022729 - MGP_CBAJ_P0086670 Cuzd1 protein_coding protein_coding MGP_CBAJ_T0081516.1 MGP_CBAJ_G0031427.1 mouse_genomes_project 7 18652312 18658537 + MGP_CBAJ_P0081516 Snrpd2 protein_coding protein_coding MGP_CBAJ_T0081517.1 MGP_CBAJ_G0031427.1 mouse_genomes_project 7 18652449 18653684 + Snrpd2 protein_coding retained_intron MGP_CBAJ_T0015621.1 MGP_CBAJ_G0013733.1 mouse_genomes_project 7 88478825 88480356 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0085270.1 MGP_CBAJ_G0032448.1 mouse_genomes_project 7 118537793 118538741 + MGP_CBAJ_P0085270 Olfr704 protein_coding protein_coding MGP_CBAJ_T0081299.1 MGP_CBAJ_G0031359.1 mouse_genomes_project 7 14976928 14978558 + Kptn protein_coding retained_intron MGP_CBAJ_T0081300.1 MGP_CBAJ_G0031359.1 mouse_genomes_project 7 14976928 14984567 + MGP_CBAJ_P0081300 Kptn protein_coding protein_coding MGP_CBAJ_T0081301.1 MGP_CBAJ_G0031359.1 mouse_genomes_project 7 14976962 14978006 + Kptn protein_coding retained_intron MGP_CBAJ_T0081302.1 MGP_CBAJ_G0031359.1 mouse_genomes_project 7 14977252 14980914 + Kptn protein_coding retained_intron MGP_CBAJ_T0081303.1 MGP_CBAJ_G0031359.1 mouse_genomes_project 7 14977484 14977997 + Kptn protein_coding retained_intron MGP_CBAJ_T0081304.1 MGP_CBAJ_G0031359.1 mouse_genomes_project 7 14979864 14980877 + Kptn protein_coding retained_intron MGP_CBAJ_T0081305.1 MGP_CBAJ_G0031359.1 mouse_genomes_project 7 14979931 14981056 + Kptn protein_coding retained_intron MGP_CBAJ_T0081306.1 MGP_CBAJ_G0031359.1 mouse_genomes_project 7 14982462 14984415 + Kptn protein_coding retained_intron MGP_CBAJ_T0008861.1 MGP_CBAJ_G0007135.1 mouse_genomes_project 7 99351941 99359077 - 2310010J17Rik lincRNA lincRNA MGP_CBAJ_T0081773.1 MGP_CBAJ_G0031505.1 mouse_genomes_project 7 24552205 24555731 - MGP_CBAJ_P0081773 Zfp575 protein_coding protein_coding MGP_CBAJ_T0085330.1 MGP_CBAJ_G0032501.1 mouse_genomes_project 7 120720977 120721910 - MGP_CBAJ_P0085330 Olfr514 protein_coding protein_coding MGP_CBAJ_T0081758.1 MGP_CBAJ_G0031502.1 mouse_genomes_project 7 24501769 24509700 + MGP_CBAJ_P0081758 Irgq protein_coding protein_coding MGP_CBAJ_T0002161.1 MGP_CBAJ_G0002076.1 mouse_genomes_project 7 18295154 18296391 + TEC TEC MGP_CBAJ_T0008775.1 MGP_CBAJ_G0007078.1 mouse_genomes_project 7 69356555 69471939 - 4930554H23Rik lincRNA lincRNA MGP_CBAJ_T0081278.1 MGP_CBAJ_G0031351.1 mouse_genomes_project 7 14665366 14684881 - MGP_CBAJ_P0081278 Crx protein_coding protein_coding MGP_CBAJ_T0081279.1 MGP_CBAJ_G0031351.1 mouse_genomes_project 7 14665367 14674798 - MGP_CBAJ_P0081279 Crx protein_coding protein_coding MGP_CBAJ_T0081280.1 MGP_CBAJ_G0031351.1 mouse_genomes_project 7 14666645 14684785 - Crx protein_coding processed_transcript MGP_CBAJ_T0081281.1 MGP_CBAJ_G0031351.1 mouse_genomes_project 7 14666645 14684757 - MGP_CBAJ_P0081281 Crx protein_coding protein_coding MGP_CBAJ_T0081282.1 MGP_CBAJ_G0031351.1 mouse_genomes_project 7 14667475 14673820 - MGP_CBAJ_P0081282 Crx protein_coding protein_coding MGP_CBAJ_T0010762.1 MGP_CBAJ_G0008900.1 mouse_genomes_project 7 67605022 67605082 - Mir344h-1 miRNA miRNA MGP_CBAJ_T0018076.1 MGP_CBAJ_G0015398.1 mouse_genomes_project 7 27914339 27924330 + Gm44641 processed_transcript processed_transcript MGP_CBAJ_T0015536.1 MGP_CBAJ_G0013648.1 mouse_genomes_project 7 35785470 35786229 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0082377.1 MGP_CBAJ_G0031659.1 mouse_genomes_project 7 31146308 31163466 + MGP_CBAJ_P0082377 Zfp420 protein_coding protein_coding MGP_CBAJ_T0082378.1 MGP_CBAJ_G0031659.1 mouse_genomes_project 7 31146333 31147944 + Zfp420 protein_coding retained_intron MGP_CBAJ_T0082379.1 MGP_CBAJ_G0031659.1 mouse_genomes_project 7 31146340 31164253 + Zfp420 protein_coding processed_transcript MGP_CBAJ_T0082380.1 MGP_CBAJ_G0031659.1 mouse_genomes_project 7 31146370 31163788 + MGP_CBAJ_P0082380 Zfp420 protein_coding protein_coding MGP_CBAJ_T0082381.1 MGP_CBAJ_G0031659.1 mouse_genomes_project 7 31159480 31161497 + Zfp420 protein_coding retained_intron MGP_CBAJ_T0081354.1 MGP_CBAJ_G0031375.1 mouse_genomes_project 7 15706274 15717165 + MGP_CBAJ_P0081354 Ap2s1 protein_coding protein_coding MGP_CBAJ_T0081355.1 MGP_CBAJ_G0031375.1 mouse_genomes_project 7 15706308 15716885 + MGP_CBAJ_P0081355 Ap2s1 protein_coding protein_coding MGP_CBAJ_T0081356.1 MGP_CBAJ_G0031375.1 mouse_genomes_project 7 15706336 15716805 + MGP_CBAJ_P0081356 Ap2s1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081357.1 MGP_CBAJ_G0031375.1 mouse_genomes_project 7 15706402 15716619 + Ap2s1 protein_coding processed_transcript MGP_CBAJ_T0081358.1 MGP_CBAJ_G0031375.1 mouse_genomes_project 7 15714633 15717165 + Ap2s1 protein_coding retained_intron MGP_CBAJ_T0084759.1 MGP_CBAJ_G0032237.1 mouse_genomes_project 7 110981404 110990094 + MGP_CBAJ_P0084759 Ucp2 protein_coding protein_coding MGP_CBAJ_T0084760.1 MGP_CBAJ_G0032237.1 mouse_genomes_project 7 110981431 110985022 + Ucp2 protein_coding retained_intron MGP_CBAJ_T0084761.1 MGP_CBAJ_G0032237.1 mouse_genomes_project 7 110981862 110985237 + MGP_CBAJ_P0084761 Ucp2 protein_coding protein_coding MGP_CBAJ_T0084762.1 MGP_CBAJ_G0032237.1 mouse_genomes_project 7 110982134 110985379 + MGP_CBAJ_P0084762 Ucp2 protein_coding protein_coding MGP_CBAJ_T0084763.1 MGP_CBAJ_G0032237.1 mouse_genomes_project 7 110984152 110986330 + MGP_CBAJ_P0084763 Ucp2 protein_coding protein_coding MGP_CBAJ_T0084764.1 MGP_CBAJ_G0032237.1 mouse_genomes_project 7 110985269 110986699 + Ucp2 protein_coding processed_transcript MGP_CBAJ_T0084765.1 MGP_CBAJ_G0032237.1 mouse_genomes_project 7 110985341 110986818 + Ucp2 protein_coding processed_transcript MGP_CBAJ_T0084766.1 MGP_CBAJ_G0032237.1 mouse_genomes_project 7 110986214 110986685 + Ucp2 protein_coding processed_transcript MGP_CBAJ_T0084767.1 MGP_CBAJ_G0032237.1 mouse_genomes_project 7 110986419 110987380 + Ucp2 protein_coding processed_transcript MGP_CBAJ_T0005111.1 MGP_CBAJ_G0004347.1 mouse_genomes_project 7 32684885 32694663 + Gm10640 antisense antisense MGP_CBAJ_T0005112.1 MGP_CBAJ_G0004347.1 mouse_genomes_project 7 32693470 32703344 + Gm10640 antisense antisense MGP_CBAJ_T0008781.1 MGP_CBAJ_G0007083.1 mouse_genomes_project 7 71424521 71425077 - Gm45214 lincRNA lincRNA MGP_CBAJ_T0008782.1 MGP_CBAJ_G0007083.1 mouse_genomes_project 7 71424524 71425137 - Gm45214 lincRNA lincRNA MGP_CBAJ_T0081838.1 MGP_CBAJ_G0031523.1 mouse_genomes_project 7 25176640 25181143 + Zfp574 protein_coding processed_transcript MGP_CBAJ_T0081839.1 MGP_CBAJ_G0031523.1 mouse_genomes_project 7 25176719 25181502 + Zfp574 protein_coding processed_transcript MGP_CBAJ_T0081840.1 MGP_CBAJ_G0031523.1 mouse_genomes_project 7 25181331 25187619 + MGP_CBAJ_P0081840 Zfp574 protein_coding protein_coding MGP_CBAJ_T0081841.1 MGP_CBAJ_G0031523.1 mouse_genomes_project 7 25181410 25186607 + MGP_CBAJ_P0081841 Zfp574 protein_coding protein_coding MGP_CBAJ_T0102053.1 MGP_CBAJ_G0040083.1 mouse_genomes_project 7 8197916 8203676 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0082468.1 MGP_CBAJ_G0031682.1 mouse_genomes_project 7 31710640 31712491 + Syne4 protein_coding processed_transcript MGP_CBAJ_T0082469.1 MGP_CBAJ_G0031682.1 mouse_genomes_project 7 31710649 31714880 + MGP_CBAJ_P0082469 Syne4 protein_coding protein_coding MGP_CBAJ_T0082470.1 MGP_CBAJ_G0031682.1 mouse_genomes_project 7 31710704 31711543 + Syne4 protein_coding retained_intron MGP_CBAJ_T0082471.1 MGP_CBAJ_G0031682.1 mouse_genomes_project 7 31710713 31712925 + MGP_CBAJ_P0082471 Syne4 protein_coding protein_coding MGP_CBAJ_T0082472.1 MGP_CBAJ_G0031682.1 mouse_genomes_project 7 31710718 31712694 + Syne4 protein_coding retained_intron MGP_CBAJ_T0082473.1 MGP_CBAJ_G0031682.1 mouse_genomes_project 7 31710721 31712919 + MGP_CBAJ_P0082473 Syne4 protein_coding protein_coding MGP_CBAJ_T0082474.1 MGP_CBAJ_G0031682.1 mouse_genomes_project 7 31710749 31714880 + MGP_CBAJ_P0082474 Syne4 protein_coding protein_coding MGP_CBAJ_T0082475.1 MGP_CBAJ_G0031682.1 mouse_genomes_project 7 31710830 31714835 + MGP_CBAJ_P0082475 Syne4 protein_coding unknown_likely_coding MGP_CBAJ_T0082476.1 MGP_CBAJ_G0031682.1 mouse_genomes_project 7 31710983 31712180 + Syne4 protein_coding retained_intron MGP_CBAJ_T0082477.1 MGP_CBAJ_G0031682.1 mouse_genomes_project 7 31711143 31713184 + Syne4 protein_coding retained_intron MGP_CBAJ_T0082478.1 MGP_CBAJ_G0031682.1 mouse_genomes_project 7 31711853 31712701 + Syne4 protein_coding retained_intron MGP_CBAJ_T0082479.1 MGP_CBAJ_G0031682.1 mouse_genomes_project 7 31712605 31714880 + Syne4 protein_coding retained_intron MGP_CBAJ_T0082480.1 MGP_CBAJ_G0031682.1 mouse_genomes_project 7 31712775 31714876 + MGP_CBAJ_P0082480 Syne4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082481.1 MGP_CBAJ_G0031682.1 mouse_genomes_project 7 31712820 31714879 + MGP_CBAJ_P0082481 Syne4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082482.1 MGP_CBAJ_G0031682.1 mouse_genomes_project 7 31712821 31714874 + MGP_CBAJ_P0082482 Syne4 protein_coding protein_coding MGP_CBAJ_T0082483.1 MGP_CBAJ_G0031682.1 mouse_genomes_project 7 31712853 31714878 + MGP_CBAJ_P0082483 Syne4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082484.1 MGP_CBAJ_G0031682.1 mouse_genomes_project 7 31713073 31714874 + Syne4 protein_coding retained_intron MGP_CBAJ_T0082485.1 MGP_CBAJ_G0031682.1 mouse_genomes_project 7 31713599 31714874 + Syne4 protein_coding retained_intron MGP_CBAJ_T0081558.1 MGP_CBAJ_G0031438.1 mouse_genomes_project 7 18892810 18894378 + Ppp1r13l protein_coding processed_transcript MGP_CBAJ_T0081559.1 MGP_CBAJ_G0031438.1 mouse_genomes_project 7 18892831 18903073 + MGP_CBAJ_P0081559 Ppp1r13l protein_coding protein_coding MGP_CBAJ_T0081560.1 MGP_CBAJ_G0031438.1 mouse_genomes_project 7 18893707 18903069 + MGP_CBAJ_P0081560 Ppp1r13l protein_coding protein_coding MGP_CBAJ_T0081561.1 MGP_CBAJ_G0031438.1 mouse_genomes_project 7 18894277 18911683 + MGP_CBAJ_P0081561 Ppp1r13l protein_coding protein_coding MGP_CBAJ_T0081562.1 MGP_CBAJ_G0031438.1 mouse_genomes_project 7 18901650 18903047 + MGP_CBAJ_P0081562 Ppp1r13l protein_coding protein_coding MGP_CBAJ_T0086904.1 MGP_CBAJ_G0032829.1 mouse_genomes_project 7 155514256 155518474 + MGP_CBAJ_P0086904 Zfp511 protein_coding protein_coding MGP_CBAJ_T0008945.1 MGP_CBAJ_G0007190.1 mouse_genomes_project 7 145820820 145824962 + 1700029B22Rik lincRNA lincRNA MGP_CBAJ_T0008946.1 MGP_CBAJ_G0007190.1 mouse_genomes_project 7 145820825 145824962 + 1700029B22Rik lincRNA lincRNA MGP_CBAJ_T0008947.1 MGP_CBAJ_G0007190.1 mouse_genomes_project 7 145820863 145824940 + 1700029B22Rik lincRNA lincRNA MGP_CBAJ_T0084402.1 MGP_CBAJ_G0032128.1 mouse_genomes_project 7 93129607 93150242 - MGP_CBAJ_P0084402 Fah protein_coding protein_coding MGP_CBAJ_T0084403.1 MGP_CBAJ_G0032128.1 mouse_genomes_project 7 93139967 93151140 - MGP_CBAJ_P0084403 Fah protein_coding protein_coding MGP_CBAJ_T0084404.1 MGP_CBAJ_G0032128.1 mouse_genomes_project 7 93145504 93146528 - Fah protein_coding processed_transcript MGP_CBAJ_T0084405.1 MGP_CBAJ_G0032128.1 mouse_genomes_project 7 93146048 93150144 - Fah protein_coding retained_intron MGP_CBAJ_T0083852.1 MGP_CBAJ_G0032017.1 mouse_genomes_project 7 72359488 72376916 + Snrpa1 protein_coding processed_transcript MGP_CBAJ_T0083853.1 MGP_CBAJ_G0032017.1 mouse_genomes_project 7 72360785 72370005 + Snrpa1 protein_coding processed_transcript MGP_CBAJ_T0083854.1 MGP_CBAJ_G0032017.1 mouse_genomes_project 7 72360824 72377160 + MGP_CBAJ_P0083854 Snrpa1 protein_coding protein_coding MGP_CBAJ_T0083855.1 MGP_CBAJ_G0032017.1 mouse_genomes_project 7 72361018 72376949 + Snrpa1 protein_coding processed_transcript MGP_CBAJ_T0083856.1 MGP_CBAJ_G0032017.1 mouse_genomes_project 7 72361030 72377153 + MGP_CBAJ_P0083856 Snrpa1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083857.1 MGP_CBAJ_G0032017.1 mouse_genomes_project 7 72361050 72372088 + Snrpa1 protein_coding retained_intron MGP_CBAJ_T0083858.1 MGP_CBAJ_G0032017.1 mouse_genomes_project 7 72361089 72376943 + Snrpa1 protein_coding processed_transcript MGP_CBAJ_T0083859.1 MGP_CBAJ_G0032017.1 mouse_genomes_project 7 72361267 72362653 + Snrpa1 protein_coding processed_transcript MGP_CBAJ_T0083860.1 MGP_CBAJ_G0032017.1 mouse_genomes_project 7 72369330 72370002 + Snrpa1 protein_coding retained_intron MGP_CBAJ_T0102210.1 MGP_CBAJ_G0040239.1 mouse_genomes_project 7 115178918 115179380 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081595.1 MGP_CBAJ_G0031449.1 mouse_genomes_project 7 19130299 19141159 - MGP_CBAJ_P0081595 Gemin7 protein_coding protein_coding MGP_CBAJ_T0081596.1 MGP_CBAJ_G0031449.1 mouse_genomes_project 7 19130302 19140664 - MGP_CBAJ_P0081596 Gemin7 protein_coding protein_coding MGP_CBAJ_T0081597.1 MGP_CBAJ_G0031449.1 mouse_genomes_project 7 19130440 19140289 - MGP_CBAJ_P0081597 Gemin7 protein_coding protein_coding MGP_CBAJ_T0081598.1 MGP_CBAJ_G0031449.1 mouse_genomes_project 7 19130472 19140410 - MGP_CBAJ_P0081598 Gemin7 protein_coding protein_coding MGP_CBAJ_T0081599.1 MGP_CBAJ_G0031449.1 mouse_genomes_project 7 19130599 19140706 - MGP_CBAJ_P0081599 Gemin7 protein_coding protein_coding MGP_CBAJ_T0081600.1 MGP_CBAJ_G0031449.1 mouse_genomes_project 7 19130777 19140495 - MGP_CBAJ_P0081600 Gemin7 protein_coding protein_coding MGP_CBAJ_T0086905.1 MGP_CBAJ_G0032830.1 mouse_genomes_project 7 155526815 155529750 - MGP_CBAJ_P0086905 Msx3 protein_coding protein_coding MGP_CBAJ_T0086906.1 MGP_CBAJ_G0032830.1 mouse_genomes_project 7 155527032 155529749 - MGP_CBAJ_P0086906 Msx3 protein_coding protein_coding MGP_CBAJ_T0086787.1 MGP_CBAJ_G0032796.1 mouse_genomes_project 7 148650204 148760754 + MGP_CBAJ_P0086787 Fank1 protein_coding protein_coding MGP_CBAJ_T0086788.1 MGP_CBAJ_G0032796.1 mouse_genomes_project 7 148650234 148756188 + MGP_CBAJ_P0086788 Fank1 protein_coding protein_coding MGP_CBAJ_T0086789.1 MGP_CBAJ_G0032796.1 mouse_genomes_project 7 148650285 148760087 + MGP_CBAJ_P0086789 Fank1 protein_coding protein_coding MGP_CBAJ_T0081728.1 MGP_CBAJ_G0031495.1 mouse_genomes_project 7 24289397 24298267 + MGP_CBAJ_P0081728 Lypd5 protein_coding protein_coding MGP_CBAJ_T0086535.1 MGP_CBAJ_G0032749.1 mouse_genomes_project 7 142532466 142539054 + MGP_CBAJ_P0086535 Tgfb1i1 protein_coding protein_coding MGP_CBAJ_T0081909.1 MGP_CBAJ_G0031540.1 mouse_genomes_project 7 25811357 25817495 + MGP_CBAJ_P0081909 Atp5sl protein_coding protein_coding MGP_CBAJ_T0081910.1 MGP_CBAJ_G0031540.1 mouse_genomes_project 7 25811367 25812483 + Atp5sl protein_coding retained_intron MGP_CBAJ_T0081911.1 MGP_CBAJ_G0031540.1 mouse_genomes_project 7 25811436 25817492 + MGP_CBAJ_P0081911 Atp5sl protein_coding protein_coding MGP_CBAJ_T0081912.1 MGP_CBAJ_G0031540.1 mouse_genomes_project 7 25812480 25814350 + Atp5sl protein_coding retained_intron MGP_CBAJ_T0081913.1 MGP_CBAJ_G0031540.1 mouse_genomes_project 7 25812839 25816026 + MGP_CBAJ_P0081913 Atp5sl protein_coding nonsense_mediated_decay MGP_CBAJ_T0081914.1 MGP_CBAJ_G0031540.1 mouse_genomes_project 7 25812846 25813947 + Atp5sl protein_coding processed_transcript MGP_CBAJ_T0083874.1 MGP_CBAJ_G0032021.1 mouse_genomes_project 7 72713909 72737732 + MGP_CBAJ_P0083874 Gm10974 protein_coding protein_coding MGP_CBAJ_T0082598.1 MGP_CBAJ_G0031710.1 mouse_genomes_project 7 32153156 32154990 - MGP_CBAJ_P0082598 Tmem147 protein_coding protein_coding MGP_CBAJ_T0008726.1 MGP_CBAJ_G0007040.1 mouse_genomes_project 7 36295191 36298867 - Gm12762 lincRNA lincRNA MGP_CBAJ_T0002164.1 MGP_CBAJ_G0002079.1 mouse_genomes_project 7 32749723 32750481 + TEC TEC MGP_CBAJ_T0015499.1 MGP_CBAJ_G0013611.1 mouse_genomes_project 7 16776385 16776904 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0083330.1 MGP_CBAJ_G0031887.1 mouse_genomes_project 7 49465728 49468421 - MGP_CBAJ_P0083330 Lin7b protein_coding protein_coding MGP_CBAJ_T0083331.1 MGP_CBAJ_G0031887.1 mouse_genomes_project 7 49465730 49466440 - Lin7b protein_coding retained_intron MGP_CBAJ_T0083332.1 MGP_CBAJ_G0031887.1 mouse_genomes_project 7 49467047 49468153 - Lin7b protein_coding retained_intron MGP_CBAJ_T0083333.1 MGP_CBAJ_G0031887.1 mouse_genomes_project 7 49467101 49468023 - Lin7b protein_coding retained_intron MGP_CBAJ_T0083334.1 MGP_CBAJ_G0031887.1 mouse_genomes_project 7 49467400 49468184 - Lin7b protein_coding retained_intron MGP_CBAJ_T0015655.1 MGP_CBAJ_G0013767.1 mouse_genomes_project 7 111144054 111144491 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100777.1 MGP_CBAJ_G0039032.1 mouse_genomes_project 7 157916768 157916862 + Gm25370 snoRNA snoRNA MGP_CBAJ_T0083597.1 MGP_CBAJ_G0031959.1 mouse_genomes_project 7 53075372 53087506 - MGP_CBAJ_P0083597 Mrgprb1 protein_coding protein_coding MGP_CBAJ_T0083598.1 MGP_CBAJ_G0031959.1 mouse_genomes_project 7 53078159 53087459 - MGP_CBAJ_P0083598 Mrgprb1 protein_coding protein_coding MGP_CBAJ_T0083599.1 MGP_CBAJ_G0031959.1 mouse_genomes_project 7 53078389 53087410 - MGP_CBAJ_P0083599 Mrgprb1 protein_coding protein_coding MGP_CBAJ_T0102203.1 MGP_CBAJ_G0040232.1 mouse_genomes_project 7 114692204 114700207 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015637.1 MGP_CBAJ_G0013749.1 mouse_genomes_project 7 104397158 104397549 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0083191.1 MGP_CBAJ_G0031848.1 mouse_genomes_project 7 48761764 48792487 + MGP_CBAJ_P0083191 Vrk3 protein_coding protein_coding MGP_CBAJ_T0083192.1 MGP_CBAJ_G0031848.1 mouse_genomes_project 7 48761836 48771457 + Vrk3 protein_coding retained_intron MGP_CBAJ_T0083193.1 MGP_CBAJ_G0031848.1 mouse_genomes_project 7 48761935 48773121 + MGP_CBAJ_P0083193 Vrk3 protein_coding protein_coding MGP_CBAJ_T0083194.1 MGP_CBAJ_G0031848.1 mouse_genomes_project 7 48761987 48792487 + MGP_CBAJ_P0083194 Vrk3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083195.1 MGP_CBAJ_G0031848.1 mouse_genomes_project 7 48761997 48776407 + MGP_CBAJ_P0083195 Vrk3 protein_coding protein_coding MGP_CBAJ_T0083196.1 MGP_CBAJ_G0031848.1 mouse_genomes_project 7 48761998 48778155 + MGP_CBAJ_P0083196 Vrk3 protein_coding protein_coding MGP_CBAJ_T0083197.1 MGP_CBAJ_G0031848.1 mouse_genomes_project 7 48762294 48767308 + MGP_CBAJ_P0083197 Vrk3 protein_coding protein_coding MGP_CBAJ_T0083198.1 MGP_CBAJ_G0031848.1 mouse_genomes_project 7 48765464 48772759 + Vrk3 protein_coding processed_transcript MGP_CBAJ_T0083199.1 MGP_CBAJ_G0031848.1 mouse_genomes_project 7 48765466 48772759 + Vrk3 protein_coding processed_transcript MGP_CBAJ_T0085037.1 MGP_CBAJ_G0032332.1 mouse_genomes_project 7 114664577 114665540 + MGP_CBAJ_P0085037 Olfr619 protein_coding protein_coding MGP_CBAJ_T0008863.1 MGP_CBAJ_G0007137.1 mouse_genomes_project 7 102304530 102308346 + Gm26981 lincRNA lincRNA MGP_CBAJ_T0008737.1 MGP_CBAJ_G0007050.1 mouse_genomes_project 7 38438601 38441742 + Gm45143 lincRNA lincRNA MGP_CBAJ_T0100761.1 MGP_CBAJ_G0039016.1 mouse_genomes_project 7 122049578 122049711 + Gm25636 snoRNA snoRNA MGP_CBAJ_T0102090.1 MGP_CBAJ_G0040120.1 mouse_genomes_project 7 13245261 13245552 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0102135.1 MGP_CBAJ_G0040164.1 mouse_genomes_project 7 47858976 47918842 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081115.1 MGP_CBAJ_G0031278.1 mouse_genomes_project 7 4672741 4685092 + MGP_CBAJ_P0081115 Zfp418 protein_coding protein_coding MGP_CBAJ_T0085135.1 MGP_CBAJ_G0032402.1 mouse_genomes_project 7 116161761 116162700 - MGP_CBAJ_P0085135 Olfr670 protein_coding protein_coding MGP_CBAJ_T0084385.1 MGP_CBAJ_G0032122.1 mouse_genomes_project 7 92264866 92281839 - MGP_CBAJ_P0084385 Cfap161 protein_coding protein_coding MGP_CBAJ_T0084386.1 MGP_CBAJ_G0032122.1 mouse_genomes_project 7 92266386 92281900 - MGP_CBAJ_P0084386 Cfap161 protein_coding protein_coding MGP_CBAJ_T0084387.1 MGP_CBAJ_G0032122.1 mouse_genomes_project 7 92273199 92281191 - MGP_CBAJ_P0084387 Cfap161 protein_coding protein_coding MGP_CBAJ_T0082277.1 MGP_CBAJ_G0031636.1 mouse_genomes_project 7 29961824 29973588 + MGP_CBAJ_P0082277 Capn12 protein_coding protein_coding MGP_CBAJ_T0099515.1 MGP_CBAJ_G0037770.1 mouse_genomes_project 7 124178597 124178747 - Gm23345 snRNA snRNA MGP_CBAJ_T0083896.1 MGP_CBAJ_G0032026.1 mouse_genomes_project 7 73218362 73353178 + Adamts17 protein_coding retained_intron MGP_CBAJ_T0083897.1 MGP_CBAJ_G0032026.1 mouse_genomes_project 7 73218362 73418998 + Adamts17 protein_coding retained_intron MGP_CBAJ_T0083898.1 MGP_CBAJ_G0032026.1 mouse_genomes_project 7 73218362 73581750 + MGP_CBAJ_P0083898 Adamts17 protein_coding protein_coding MGP_CBAJ_T0083899.1 MGP_CBAJ_G0032026.1 mouse_genomes_project 7 73218440 73581754 + MGP_CBAJ_P0083899 Adamts17 protein_coding protein_coding MGP_CBAJ_T0083900.1 MGP_CBAJ_G0032026.1 mouse_genomes_project 7 73220882 73462530 + Adamts17 protein_coding processed_transcript MGP_CBAJ_T0083901.1 MGP_CBAJ_G0032026.1 mouse_genomes_project 7 73228343 73252736 + Adamts17 protein_coding processed_transcript MGP_CBAJ_T0083902.1 MGP_CBAJ_G0032026.1 mouse_genomes_project 7 73294693 73353178 + Adamts17 protein_coding processed_transcript MGP_CBAJ_T0083903.1 MGP_CBAJ_G0032026.1 mouse_genomes_project 7 73441202 73486133 + MGP_CBAJ_P0083903 Adamts17 protein_coding protein_coding MGP_CBAJ_T0102106.1 MGP_CBAJ_G0040135.1 mouse_genomes_project 7 26285596 26299377 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085547.1 MGP_CBAJ_G0032557.1 mouse_genomes_project 7 127298290 127348142 + MGP_CBAJ_P0085547 Insc protein_coding protein_coding MGP_CBAJ_T0085548.1 MGP_CBAJ_G0032557.1 mouse_genomes_project 7 127300336 127348420 + MGP_CBAJ_P0085548 Insc protein_coding protein_coding MGP_CBAJ_T0085549.1 MGP_CBAJ_G0032557.1 mouse_genomes_project 7 127300362 127411126 + MGP_CBAJ_P0085549 Insc protein_coding protein_coding MGP_CBAJ_T0085550.1 MGP_CBAJ_G0032557.1 mouse_genomes_project 7 127308319 127326720 + Insc protein_coding retained_intron MGP_CBAJ_T0085551.1 MGP_CBAJ_G0032557.1 mouse_genomes_project 7 127326110 127411129 + MGP_CBAJ_P0085551 Insc protein_coding protein_coding MGP_CBAJ_T0085552.1 MGP_CBAJ_G0032557.1 mouse_genomes_project 7 127326148 127348179 + MGP_CBAJ_P0085552 Insc protein_coding protein_coding MGP_CBAJ_T0085553.1 MGP_CBAJ_G0032557.1 mouse_genomes_project 7 127328692 127348315 + Insc protein_coding processed_transcript MGP_CBAJ_T0085554.1 MGP_CBAJ_G0032557.1 mouse_genomes_project 7 127349178 127411126 + Insc protein_coding retained_intron MGP_CBAJ_T0085555.1 MGP_CBAJ_G0032557.1 mouse_genomes_project 7 127351097 127389938 + MGP_CBAJ_P0085555 Insc protein_coding protein_coding MGP_CBAJ_T0008841.1 MGP_CBAJ_G0007125.1 mouse_genomes_project 7 87457260 87484171 + Gm35040 lincRNA lincRNA MGP_CBAJ_T0010756.1 MGP_CBAJ_G0008894.1 mouse_genomes_project 7 67542130 67542210 - Mir344d-2 miRNA miRNA MGP_CBAJ_T0102104.1 MGP_CBAJ_G0040133.1 mouse_genomes_project 7 26244369 26251257 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0018111.1 MGP_CBAJ_G0015413.1 mouse_genomes_project 7 61405397 61406332 + Gm15888 processed_transcript processed_transcript MGP_CBAJ_T0010698.1 MGP_CBAJ_G0008836.1 mouse_genomes_project 7 175673 175756 + Mir290a miRNA miRNA MGP_CBAJ_T0084434.1 MGP_CBAJ_G0032153.1 mouse_genomes_project 7 95824697 95862951 + MGP_CBAJ_P0084434 Vmn2r79 protein_coding protein_coding MGP_CBAJ_T0085016.1 MGP_CBAJ_G0032312.1 mouse_genomes_project 7 114149433 114150470 - MGP_CBAJ_P0085016 Olfr591 protein_coding protein_coding MGP_CBAJ_T0084690.1 MGP_CBAJ_G0032218.1 mouse_genomes_project 7 109824468 109830405 - MGP_CBAJ_P0084690 Rps3 protein_coding protein_coding MGP_CBAJ_T0084691.1 MGP_CBAJ_G0032218.1 mouse_genomes_project 7 109824476 109830325 - MGP_CBAJ_P0084691 Rps3 protein_coding protein_coding MGP_CBAJ_T0084692.1 MGP_CBAJ_G0032218.1 mouse_genomes_project 7 109825532 109830324 - Rps3 protein_coding retained_intron MGP_CBAJ_T0084693.1 MGP_CBAJ_G0032218.1 mouse_genomes_project 7 109826351 109830308 - Rps3 protein_coding retained_intron MGP_CBAJ_T0082287.1 MGP_CBAJ_G0031638.1 mouse_genomes_project 7 30097287 30107236 - MGP_CBAJ_P0082287 Eif3k protein_coding protein_coding MGP_CBAJ_T0008956.1 MGP_CBAJ_G0007196.1 mouse_genomes_project 7 155443269 155444304 - Gm2044 lincRNA lincRNA MGP_CBAJ_T0018141.1 MGP_CBAJ_G0015423.1 mouse_genomes_project 7 106960132 106999677 - C230038L03Rik processed_transcript antisense MGP_CBAJ_T0018142.1 MGP_CBAJ_G0015423.1 mouse_genomes_project 7 106972016 107002780 - C230038L03Rik processed_transcript processed_transcript MGP_CBAJ_T0018143.1 MGP_CBAJ_G0015423.1 mouse_genomes_project 7 107000220 107004104 - C230038L03Rik processed_transcript antisense MGP_CBAJ_T0018144.1 MGP_CBAJ_G0015423.1 mouse_genomes_project 7 107000552 107004510 - C230038L03Rik processed_transcript antisense MGP_CBAJ_T0085528.1 MGP_CBAJ_G0032553.1 mouse_genomes_project 7 126921828 127059298 + MGP_CBAJ_P0085528 Pde3b protein_coding protein_coding MGP_CBAJ_T0085529.1 MGP_CBAJ_G0032553.1 mouse_genomes_project 7 127026247 127028431 + Pde3b protein_coding retained_intron MGP_CBAJ_T0085530.1 MGP_CBAJ_G0032553.1 mouse_genomes_project 7 127041771 127051064 + Pde3b protein_coding retained_intron MGP_CBAJ_T0008705.1 MGP_CBAJ_G0007021.1 mouse_genomes_project 7 18828647 18830991 - Gm26802 lincRNA lincRNA MGP_CBAJ_T0101378.1 MGP_CBAJ_G0039447.1 mouse_genomes_project 7 41566921 41575281 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0087055.1 MGP_CBAJ_G0032885.1 mouse_genomes_project 7 156862262 156866300 - MGP_CBAJ_P0087055 Lmntd2 protein_coding protein_coding MGP_CBAJ_T0087056.1 MGP_CBAJ_G0032885.1 mouse_genomes_project 7 156862262 156866302 - MGP_CBAJ_P0087056 Lmntd2 protein_coding protein_coding MGP_CBAJ_T0085306.1 MGP_CBAJ_G0032477.1 mouse_genomes_project 7 119761182 119762115 + MGP_CBAJ_P0085306 Olfr477 protein_coding protein_coding MGP_CBAJ_T0010769.1 MGP_CBAJ_G0008907.1 mouse_genomes_project 7 67979125 67979193 - Mir344f miRNA miRNA MGP_CBAJ_T0081013.1 MGP_CBAJ_G0031227.1 mouse_genomes_project 7 2046065 2074846 - MGP_CBAJ_P0081013 Isoc2b protein_coding protein_coding MGP_CBAJ_T0084415.1 MGP_CBAJ_G0032137.1 mouse_genomes_project 7 95109072 95116302 - MGP_CBAJ_P0084415 Olfr309 protein_coding protein_coding MGP_CBAJ_T0084416.1 MGP_CBAJ_G0032137.1 mouse_genomes_project 7 95109072 95109999 - MGP_CBAJ_P0084416 Olfr309 protein_coding protein_coding MGP_CBAJ_T0084855.1 MGP_CBAJ_G0032253.1 mouse_genomes_project 7 112376778 112438390 + Clpb protein_coding retained_intron MGP_CBAJ_T0084856.1 MGP_CBAJ_G0032253.1 mouse_genomes_project 7 112376778 112507874 + MGP_CBAJ_P0084856 Clpb protein_coding protein_coding MGP_CBAJ_T0084857.1 MGP_CBAJ_G0032253.1 mouse_genomes_project 7 112376850 112505512 + MGP_CBAJ_P0084857 Clpb protein_coding protein_coding MGP_CBAJ_T0084858.1 MGP_CBAJ_G0032253.1 mouse_genomes_project 7 112376902 112402201 + Clpb protein_coding retained_intron MGP_CBAJ_T0084859.1 MGP_CBAJ_G0032253.1 mouse_genomes_project 7 112376920 112419795 + MGP_CBAJ_P0084859 Clpb protein_coding nonsense_mediated_decay MGP_CBAJ_T0084860.1 MGP_CBAJ_G0032253.1 mouse_genomes_project 7 112376921 112504597 + Clpb protein_coding retained_intron MGP_CBAJ_T0084861.1 MGP_CBAJ_G0032253.1 mouse_genomes_project 7 112395389 112481831 + MGP_CBAJ_P0084861 Clpb protein_coding protein_coding MGP_CBAJ_T0084862.1 MGP_CBAJ_G0032253.1 mouse_genomes_project 7 112396468 112467063 + MGP_CBAJ_P0084862 Clpb protein_coding protein_coding MGP_CBAJ_T0084863.1 MGP_CBAJ_G0032253.1 mouse_genomes_project 7 112481714 112487536 + Clpb protein_coding processed_transcript MGP_CBAJ_T0084864.1 MGP_CBAJ_G0032253.1 mouse_genomes_project 7 112481741 112503261 + Clpb protein_coding processed_transcript MGP_CBAJ_T0008943.1 MGP_CBAJ_G0007188.1 mouse_genomes_project 7 145045771 145049042 + lincRNA lincRNA MGP_CBAJ_T0005105.1 MGP_CBAJ_G0004342.1 mouse_genomes_project 7 32165351 32176640 + Gm26935 antisense antisense MGP_CBAJ_T0008915.1 MGP_CBAJ_G0007170.1 mouse_genomes_project 7 140111411 140143114 - Gm44875 lincRNA lincRNA MGP_CBAJ_T0102190.1 MGP_CBAJ_G0040219.1 mouse_genomes_project 7 94956134 94957005 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0082059.1 MGP_CBAJ_G0031579.1 mouse_genomes_project 7 28028219 28044969 - MGP_CBAJ_P0082059 Shkbp1 protein_coding protein_coding MGP_CBAJ_T0082060.1 MGP_CBAJ_G0031579.1 mouse_genomes_project 7 28028223 28044904 - Shkbp1 protein_coding retained_intron MGP_CBAJ_T0082061.1 MGP_CBAJ_G0031579.1 mouse_genomes_project 7 28028223 28044693 - Shkbp1 protein_coding retained_intron MGP_CBAJ_T0082062.1 MGP_CBAJ_G0031579.1 mouse_genomes_project 7 28028224 28031701 - Shkbp1 protein_coding processed_transcript MGP_CBAJ_T0082063.1 MGP_CBAJ_G0031579.1 mouse_genomes_project 7 28028498 28029008 - Shkbp1 protein_coding retained_intron MGP_CBAJ_T0082064.1 MGP_CBAJ_G0031579.1 mouse_genomes_project 7 28029242 28034521 - Shkbp1 protein_coding processed_transcript MGP_CBAJ_T0082065.1 MGP_CBAJ_G0031579.1 mouse_genomes_project 7 28031077 28033548 - Shkbp1 protein_coding retained_intron MGP_CBAJ_T0082066.1 MGP_CBAJ_G0031579.1 mouse_genomes_project 7 28034193 28036538 - Shkbp1 protein_coding retained_intron MGP_CBAJ_T0082067.1 MGP_CBAJ_G0031579.1 mouse_genomes_project 7 28040649 28044709 - Shkbp1 protein_coding retained_intron MGP_CBAJ_T0082068.1 MGP_CBAJ_G0031579.1 mouse_genomes_project 7 28040690 28044872 - Shkbp1 protein_coding processed_transcript MGP_CBAJ_T0082070.1 MGP_CBAJ_G0031579.1 mouse_genomes_project 7 28043028 28044721 - Shkbp1 protein_coding retained_intron MGP_CBAJ_T0102121.1 MGP_CBAJ_G0040150.1 mouse_genomes_project 7 37694042 37696714 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085453.1 MGP_CBAJ_G0032535.1 mouse_genomes_project 7 123215885 123227484 - MGP_CBAJ_P0085453 Eif4g2 protein_coding protein_coding MGP_CBAJ_T0085454.1 MGP_CBAJ_G0032535.1 mouse_genomes_project 7 123217533 123218316 - Eif4g2 protein_coding processed_transcript MGP_CBAJ_T0085455.1 MGP_CBAJ_G0032535.1 mouse_genomes_project 7 123217756 123219426 - Eif4g2 protein_coding retained_intron MGP_CBAJ_T0085456.1 MGP_CBAJ_G0032535.1 mouse_genomes_project 7 123218564 123219414 - MGP_CBAJ_P0085456 Eif4g2 protein_coding protein_coding MGP_CBAJ_T0085457.1 MGP_CBAJ_G0032535.1 mouse_genomes_project 7 123219302 123219864 - Eif4g2 protein_coding retained_intron MGP_CBAJ_T0085458.1 MGP_CBAJ_G0032535.1 mouse_genomes_project 7 123220037 123220550 - Eif4g2 protein_coding retained_intron MGP_CBAJ_T0085459.1 MGP_CBAJ_G0032535.1 mouse_genomes_project 7 123220376 123221374 - Eif4g2 protein_coding processed_transcript MGP_CBAJ_T0085460.1 MGP_CBAJ_G0032535.1 mouse_genomes_project 7 123221687 123222916 - Eif4g2 protein_coding retained_intron MGP_CBAJ_T0085461.1 MGP_CBAJ_G0032535.1 mouse_genomes_project 7 123223114 123224529 - Eif4g2 protein_coding retained_intron MGP_CBAJ_T0085462.1 MGP_CBAJ_G0032535.1 mouse_genomes_project 7 123223586 123228184 - MGP_CBAJ_P0085462 Eif4g2 protein_coding protein_coding MGP_CBAJ_T0085463.1 MGP_CBAJ_G0032535.1 mouse_genomes_project 7 123224502 123227360 - MGP_CBAJ_P0085463 Eif4g2 protein_coding protein_coding MGP_CBAJ_T0085464.1 MGP_CBAJ_G0032535.1 mouse_genomes_project 7 123225583 123227992 - Eif4g2 protein_coding retained_intron MGP_CBAJ_T0085465.1 MGP_CBAJ_G0032535.1 mouse_genomes_project 7 123226081 123227018 - MGP_CBAJ_P0085465 Eif4g2 protein_coding protein_coding MGP_CBAJ_T0087242.1 MGP_CBAJ_G0032920.1 mouse_genomes_project 7 158041446 158042283 - MGP_CBAJ_P0087242 protein_coding protein_coding MGP_CBAJ_T0008941.1 MGP_CBAJ_G0007186.1 mouse_genomes_project 7 144279372 144303232 + Gm44778 lincRNA lincRNA MGP_CBAJ_T0008865.1 MGP_CBAJ_G0007139.1 mouse_genomes_project 7 102655192 102687516 - Gm9934 lincRNA lincRNA MGP_CBAJ_T0008866.1 MGP_CBAJ_G0007139.1 mouse_genomes_project 7 102673854 102687284 - Gm9934 lincRNA lincRNA MGP_CBAJ_T0099499.1 MGP_CBAJ_G0037754.1 mouse_genomes_project 7 89939921 89940029 + Gm26149 snRNA snRNA MGP_CBAJ_T0015520.1 MGP_CBAJ_G0013632.1 mouse_genomes_project 7 26112215 26112587 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0085507.1 MGP_CBAJ_G0032546.1 mouse_genomes_project 7 125803383 125806379 - MGP_CBAJ_P0085507 Pth protein_coding protein_coding MGP_CBAJ_T0086754.1 MGP_CBAJ_G0032790.1 mouse_genomes_project 7 148444324 148469676 - MGP_CBAJ_P0086754 Tex36 protein_coding protein_coding MGP_CBAJ_T0081221.1 MGP_CBAJ_G0031328.1 mouse_genomes_project 7 11433306 11453030 - MGP_CBAJ_P0081221 6330408A02Rik protein_coding protein_coding MGP_CBAJ_T0081222.1 MGP_CBAJ_G0031328.1 mouse_genomes_project 7 11433306 11452491 - MGP_CBAJ_P0081222 6330408A02Rik protein_coding protein_coding MGP_CBAJ_T0081223.1 MGP_CBAJ_G0031328.1 mouse_genomes_project 7 11433307 11453068 - MGP_CBAJ_P0081223 6330408A02Rik protein_coding protein_coding MGP_CBAJ_T0081224.1 MGP_CBAJ_G0031328.1 mouse_genomes_project 7 11440073 11453068 - 6330408A02Rik protein_coding retained_intron MGP_CBAJ_T0081225.1 MGP_CBAJ_G0031328.1 mouse_genomes_project 7 11447592 11453017 - 6330408A02Rik protein_coding retained_intron MGP_CBAJ_T0081226.1 MGP_CBAJ_G0031328.1 mouse_genomes_project 7 11447701 11452769 - 6330408A02Rik protein_coding retained_intron MGP_CBAJ_T0081227.1 MGP_CBAJ_G0031328.1 mouse_genomes_project 7 11451626 11453009 - MGP_CBAJ_P0081227 6330408A02Rik protein_coding protein_coding MGP_CBAJ_T0015660.1 MGP_CBAJ_G0013772.1 mouse_genomes_project 7 114953458 114953720 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0083184.1 MGP_CBAJ_G0031846.1 mouse_genomes_project 7 48708746 48720161 + MGP_CBAJ_P0083184 Izumo2 protein_coding protein_coding MGP_CBAJ_T0081119.1 MGP_CBAJ_G0031282.1 mouse_genomes_project 7 8042031 8043555 - MGP_CBAJ_P0081119 Vmn1r66 protein_coding protein_coding MGP_CBAJ_T0084686.1 MGP_CBAJ_G0032217.1 mouse_genomes_project 7 109812515 109820586 + MGP_CBAJ_P0084686 Klhl35 protein_coding protein_coding MGP_CBAJ_T0084687.1 MGP_CBAJ_G0032217.1 mouse_genomes_project 7 109815462 109818281 + MGP_CBAJ_P0084687 Klhl35 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084688.1 MGP_CBAJ_G0032217.1 mouse_genomes_project 7 109816447 109818368 + Klhl35 protein_coding retained_intron MGP_CBAJ_T0084689.1 MGP_CBAJ_G0032217.1 mouse_genomes_project 7 109818320 109820168 + MGP_CBAJ_P0084689 Klhl35 protein_coding protein_coding MGP_CBAJ_T0081346.1 MGP_CBAJ_G0031369.1 mouse_genomes_project 7 15318000 15359942 + MGP_CBAJ_P0081346 Zc3h4 protein_coding protein_coding MGP_CBAJ_T0008751.1 MGP_CBAJ_G0007061.1 mouse_genomes_project 7 42794451 42801609 - lincRNA lincRNA MGP_CBAJ_T0008752.1 MGP_CBAJ_G0007061.1 mouse_genomes_project 7 42794455 42801626 - lincRNA lincRNA MGP_CBAJ_T0008753.1 MGP_CBAJ_G0007061.1 mouse_genomes_project 7 42794456 42801647 - lincRNA lincRNA MGP_CBAJ_T0008754.1 MGP_CBAJ_G0007061.1 mouse_genomes_project 7 42794509 42801610 - lincRNA lincRNA MGP_CBAJ_T0085288.1 MGP_CBAJ_G0032465.1 mouse_genomes_project 7 118906004 118907480 + MGP_CBAJ_P0085288 Rbmxl2 protein_coding protein_coding MGP_CBAJ_T0082592.1 MGP_CBAJ_G0031708.1 mouse_genomes_project 7 32124509 32125107 + MGP_CBAJ_P0082592 2200002J24Rik protein_coding protein_coding MGP_CBAJ_T0081619.1 MGP_CBAJ_G0031456.1 mouse_genomes_project 7 19280839 19284331 - MGP_CBAJ_P0081619 Apoc1 protein_coding protein_coding MGP_CBAJ_T0081620.1 MGP_CBAJ_G0031456.1 mouse_genomes_project 7 19280839 19284393 - MGP_CBAJ_P0081620 Apoc1 protein_coding protein_coding MGP_CBAJ_T0018165.1 MGP_CBAJ_G0015436.1 mouse_genomes_project 7 142742186 142744212 - Gm15503 processed_transcript retained_intron MGP_CBAJ_T0018166.1 MGP_CBAJ_G0015436.1 mouse_genomes_project 7 142743638 142745560 - Gm15503 processed_transcript sense_intronic MGP_CBAJ_T0085591.1 MGP_CBAJ_G0032561.1 mouse_genomes_project 7 129020912 129023551 - MGP_CBAJ_P0085591 Rps13 protein_coding protein_coding MGP_CBAJ_T0085592.1 MGP_CBAJ_G0032561.1 mouse_genomes_project 7 129020917 129023489 - MGP_CBAJ_P0085592 Rps13 protein_coding protein_coding MGP_CBAJ_T0085593.1 MGP_CBAJ_G0032561.1 mouse_genomes_project 7 129020918 129022538 - Rps13 protein_coding retained_intron MGP_CBAJ_T0085594.1 MGP_CBAJ_G0032561.1 mouse_genomes_project 7 129020919 129023486 - Rps13 protein_coding retained_intron MGP_CBAJ_T0085595.1 MGP_CBAJ_G0032561.1 mouse_genomes_project 7 129020919 129023491 - Rps13 protein_coding retained_intron MGP_CBAJ_T0085596.1 MGP_CBAJ_G0032561.1 mouse_genomes_project 7 129020919 129023522 - MGP_CBAJ_P0085596 Rps13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085597.1 MGP_CBAJ_G0032561.1 mouse_genomes_project 7 129021410 129023473 - Rps13 protein_coding retained_intron MGP_CBAJ_T0085598.1 MGP_CBAJ_G0032561.1 mouse_genomes_project 7 129022395 129023478 - Rps13 protein_coding retained_intron MGP_CBAJ_T0084004.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 85883307 86314650 - MGP_CBAJ_P0084004 Ntrk3 protein_coding protein_coding MGP_CBAJ_T0084005.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 85890057 85901925 - MGP_CBAJ_P0084005 Ntrk3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084006.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 85901561 86314025 - MGP_CBAJ_P0084006 Ntrk3 protein_coding protein_coding MGP_CBAJ_T0084007.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 85901588 86314031 - MGP_CBAJ_P0084007 Ntrk3 protein_coding protein_coding MGP_CBAJ_T0084008.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 85965437 85985564 - MGP_CBAJ_P0084008 Ntrk3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084009.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 86026579 86314224 - MGP_CBAJ_P0084009 Ntrk3 protein_coding protein_coding MGP_CBAJ_T0084010.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 86028212 86109312 - Ntrk3 protein_coding processed_transcript MGP_CBAJ_T0084011.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 86028520 86084607 - MGP_CBAJ_P0084011 Ntrk3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084012.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 86084568 86183479 - Ntrk3 protein_coding processed_transcript MGP_CBAJ_T0084013.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 86180981 86314217 - Ntrk3 protein_coding retained_intron MGP_CBAJ_T0084014.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 86212452 86308134 - Ntrk3 protein_coding processed_transcript MGP_CBAJ_T0084015.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 86253280 86368210 - Ntrk3 protein_coding processed_transcript MGP_CBAJ_T0084016.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 86254014 86314645 - MGP_CBAJ_P0084016 Ntrk3 protein_coding protein_coding MGP_CBAJ_T0084017.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 86313777 86415776 - MGP_CBAJ_P0084017 Ntrk3 protein_coding protein_coding MGP_CBAJ_T0084018.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 86314047 86314819 - Ntrk3 protein_coding processed_transcript MGP_CBAJ_T0084019.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 86317186 86481400 - Ntrk3 protein_coding processed_transcript MGP_CBAJ_T0084020.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 86326399 86501194 - Ntrk3 protein_coding processed_transcript MGP_CBAJ_T0084021.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 86333445 86416161 - Ntrk3 protein_coding processed_transcript MGP_CBAJ_T0084022.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 86489882 86501196 - Ntrk3 protein_coding processed_transcript MGP_CBAJ_T0084023.1 MGP_CBAJ_G0032047.1 mouse_genomes_project 7 86493657 86501196 - Ntrk3 protein_coding processed_transcript MGP_CBAJ_T0085013.1 MGP_CBAJ_G0032309.1 mouse_genomes_project 7 114052953 114053913 + MGP_CBAJ_P0085013 Olfr585 protein_coding protein_coding MGP_CBAJ_T0015610.1 MGP_CBAJ_G0013722.1 mouse_genomes_project 7 80922309 80927423 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0085021.1 MGP_CBAJ_G0032316.1 mouse_genomes_project 7 114310791 114311730 + MGP_CBAJ_P0085021 Olfr596 protein_coding protein_coding MGP_CBAJ_T0082177.1 MGP_CBAJ_G0031611.1 mouse_genomes_project 7 29282754 29295342 - MGP_CBAJ_P0082177 Plekhg2 protein_coding protein_coding MGP_CBAJ_T0082178.1 MGP_CBAJ_G0031611.1 mouse_genomes_project 7 29282755 29295686 - Plekhg2 protein_coding retained_intron MGP_CBAJ_T0082179.1 MGP_CBAJ_G0031611.1 mouse_genomes_project 7 29282755 29286427 - Plekhg2 protein_coding retained_intron MGP_CBAJ_T0082180.1 MGP_CBAJ_G0031611.1 mouse_genomes_project 7 29282755 29295603 - MGP_CBAJ_P0082180 Plekhg2 protein_coding protein_coding MGP_CBAJ_T0082181.1 MGP_CBAJ_G0031611.1 mouse_genomes_project 7 29282755 29294683 - MGP_CBAJ_P0082181 Plekhg2 protein_coding protein_coding MGP_CBAJ_T0082182.1 MGP_CBAJ_G0031611.1 mouse_genomes_project 7 29284242 29295708 - MGP_CBAJ_P0082182 Plekhg2 protein_coding protein_coding MGP_CBAJ_T0082183.1 MGP_CBAJ_G0031611.1 mouse_genomes_project 7 29287097 29288586 - Plekhg2 protein_coding retained_intron MGP_CBAJ_T0082184.1 MGP_CBAJ_G0031611.1 mouse_genomes_project 7 29291503 29294836 - MGP_CBAJ_P0082184 Plekhg2 protein_coding protein_coding MGP_CBAJ_T0082185.1 MGP_CBAJ_G0031611.1 mouse_genomes_project 7 29293189 29295189 - MGP_CBAJ_P0082185 Plekhg2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082186.1 MGP_CBAJ_G0031611.1 mouse_genomes_project 7 29293524 29294617 - MGP_CBAJ_P0082186 Plekhg2 protein_coding protein_coding MGP_CBAJ_T0010772.1 MGP_CBAJ_G0008910.1 mouse_genomes_project 7 70364925 70365031 + Mir211 miRNA miRNA MGP_CBAJ_T0102223.1 MGP_CBAJ_G0040252.1 mouse_genomes_project 7 142642122 142642316 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015570.1 MGP_CBAJ_G0013682.1 mouse_genomes_project 7 46216009 46216740 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0083073.1 MGP_CBAJ_G0031825.1 mouse_genomes_project 7 47924467 47925568 + MGP_CBAJ_P0083073 Klk1b11 protein_coding protein_coding MGP_CBAJ_T0086975.1 MGP_CBAJ_G0032865.1 mouse_genomes_project 7 156461648 156468422 + MGP_CBAJ_P0086975 Ric8a protein_coding protein_coding MGP_CBAJ_T0086976.1 MGP_CBAJ_G0032865.1 mouse_genomes_project 7 156462006 156463034 + Ric8a protein_coding retained_intron MGP_CBAJ_T0086977.1 MGP_CBAJ_G0032865.1 mouse_genomes_project 7 156462113 156463250 + Ric8a protein_coding processed_transcript MGP_CBAJ_T0086978.1 MGP_CBAJ_G0032865.1 mouse_genomes_project 7 156462133 156463234 + Ric8a protein_coding processed_transcript MGP_CBAJ_T0086979.1 MGP_CBAJ_G0032865.1 mouse_genomes_project 7 156462390 156467651 + Ric8a protein_coding retained_intron MGP_CBAJ_T0086980.1 MGP_CBAJ_G0032865.1 mouse_genomes_project 7 156462853 156464426 + Ric8a protein_coding processed_transcript MGP_CBAJ_T0086981.1 MGP_CBAJ_G0032865.1 mouse_genomes_project 7 156465333 156467835 + Ric8a protein_coding retained_intron MGP_CBAJ_T0086982.1 MGP_CBAJ_G0032865.1 mouse_genomes_project 7 156465864 156467311 + Ric8a protein_coding retained_intron MGP_CBAJ_T0083978.1 MGP_CBAJ_G0032041.1 mouse_genomes_project 7 81198795 81274840 - MGP_CBAJ_P0083978 St8sia2 protein_coding protein_coding MGP_CBAJ_T0083979.1 MGP_CBAJ_G0032041.1 mouse_genomes_project 7 81221698 81274856 - MGP_CBAJ_P0083979 St8sia2 protein_coding protein_coding MGP_CBAJ_T0015694.1 MGP_CBAJ_G0013806.1 mouse_genomes_project 7 141524454 141524626 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098090.1 MGP_CBAJ_G0036363.1 mouse_genomes_project 7 91107127 91107235 - n-R5s154 rRNA rRNA MGP_CBAJ_T0081255.1 MGP_CBAJ_G0031338.1 mouse_genomes_project 7 12196193 12299718 - MGP_CBAJ_P0081255 protein_coding protein_coding MGP_CBAJ_T0015634.1 MGP_CBAJ_G0013746.1 mouse_genomes_project 7 99331900 99332400 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0085063.1 MGP_CBAJ_G0032358.1 mouse_genomes_project 7 115189234 115190185 - MGP_CBAJ_P0085063 Olfr639 protein_coding protein_coding MGP_CBAJ_T0083424.1 MGP_CBAJ_G0031910.1 mouse_genomes_project 7 49846634 49857166 + MGP_CBAJ_P0083424 Ntn5 protein_coding protein_coding MGP_CBAJ_T0083425.1 MGP_CBAJ_G0031910.1 mouse_genomes_project 7 49847028 49857169 + MGP_CBAJ_P0083425 Ntn5 protein_coding protein_coding MGP_CBAJ_T0083426.1 MGP_CBAJ_G0031910.1 mouse_genomes_project 7 49847041 49857040 + MGP_CBAJ_P0083426 Ntn5 protein_coding protein_coding MGP_CBAJ_T0084632.1 MGP_CBAJ_G0032203.1 mouse_genomes_project 7 108392299 108399386 - MGP_CBAJ_P0084632 B3gnt6 protein_coding protein_coding MGP_CBAJ_T0082138.1 MGP_CBAJ_G0031598.1 mouse_genomes_project 7 28884617 28893012 - MGP_CBAJ_P0082138 Psmc4 protein_coding protein_coding MGP_CBAJ_T0082139.1 MGP_CBAJ_G0031598.1 mouse_genomes_project 7 28884626 28889933 - Psmc4 protein_coding retained_intron MGP_CBAJ_T0082140.1 MGP_CBAJ_G0031598.1 mouse_genomes_project 7 28884627 28892967 - Psmc4 protein_coding retained_intron MGP_CBAJ_T0082141.1 MGP_CBAJ_G0031598.1 mouse_genomes_project 7 28885498 28890260 - Psmc4 protein_coding retained_intron MGP_CBAJ_T0082142.1 MGP_CBAJ_G0031598.1 mouse_genomes_project 7 28885575 28890429 - Psmc4 protein_coding processed_transcript MGP_CBAJ_T0082143.1 MGP_CBAJ_G0031598.1 mouse_genomes_project 7 28890167 28892967 - Psmc4 protein_coding retained_intron MGP_CBAJ_T0002160.1 MGP_CBAJ_G0002075.1 mouse_genomes_project 7 16993884 16996050 - TEC TEC MGP_CBAJ_T0084999.1 MGP_CBAJ_G0032296.1 mouse_genomes_project 7 113791637 113792588 + MGP_CBAJ_P0084999 Olfr568 protein_coding protein_coding MGP_CBAJ_T0015695.1 MGP_CBAJ_G0013807.1 mouse_genomes_project 7 142242029 142242808 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0085077.1 MGP_CBAJ_G0032371.1 mouse_genomes_project 7 115383865 115390896 - MGP_CBAJ_P0085077 Olfr649 protein_coding protein_coding MGP_CBAJ_T0085078.1 MGP_CBAJ_G0032371.1 mouse_genomes_project 7 115383866 115384805 - MGP_CBAJ_P0085078 Olfr649 protein_coding protein_coding MGP_CBAJ_T0087051.1 MGP_CBAJ_G0032884.1 mouse_genomes_project 7 156846396 156853154 + Lrrc56 protein_coding retained_intron MGP_CBAJ_T0087052.1 MGP_CBAJ_G0032884.1 mouse_genomes_project 7 156847036 156861950 + MGP_CBAJ_P0087052 Lrrc56 protein_coding protein_coding MGP_CBAJ_T0087053.1 MGP_CBAJ_G0032884.1 mouse_genomes_project 7 156847360 156850501 + Lrrc56 protein_coding processed_transcript MGP_CBAJ_T0087054.1 MGP_CBAJ_G0032884.1 mouse_genomes_project 7 156849151 156852051 + Lrrc56 protein_coding processed_transcript MGP_CBAJ_T0008936.1 MGP_CBAJ_G0007182.1 mouse_genomes_project 7 142952562 142954960 - Gm45121 lincRNA lincRNA MGP_CBAJ_T0083228.1 MGP_CBAJ_G0031853.1 mouse_genomes_project 7 48879856 48888234 + MGP_CBAJ_P0083228 Pnkp protein_coding protein_coding MGP_CBAJ_T0083229.1 MGP_CBAJ_G0031853.1 mouse_genomes_project 7 48879868 48880223 + MGP_CBAJ_P0083229 Pnkp protein_coding protein_coding MGP_CBAJ_T0083230.1 MGP_CBAJ_G0031853.1 mouse_genomes_project 7 48879876 48888576 + MGP_CBAJ_P0083230 Pnkp protein_coding protein_coding MGP_CBAJ_T0083231.1 MGP_CBAJ_G0031853.1 mouse_genomes_project 7 48879884 48888240 + Pnkp protein_coding retained_intron MGP_CBAJ_T0083232.1 MGP_CBAJ_G0031853.1 mouse_genomes_project 7 48879890 48886008 + MGP_CBAJ_P0083232 Pnkp protein_coding nonsense_mediated_decay MGP_CBAJ_T0083233.1 MGP_CBAJ_G0031853.1 mouse_genomes_project 7 48880057 48886935 + MGP_CBAJ_P0083233 Pnkp protein_coding nonsense_mediated_decay MGP_CBAJ_T0083234.1 MGP_CBAJ_G0031853.1 mouse_genomes_project 7 48880059 48888233 + MGP_CBAJ_P0083234 Pnkp protein_coding protein_coding MGP_CBAJ_T0083235.1 MGP_CBAJ_G0031853.1 mouse_genomes_project 7 48880065 48888234 + MGP_CBAJ_P0083235 Pnkp protein_coding nonsense_mediated_decay MGP_CBAJ_T0083236.1 MGP_CBAJ_G0031853.1 mouse_genomes_project 7 48880096 48888225 + MGP_CBAJ_P0083236 Pnkp protein_coding nonsense_mediated_decay MGP_CBAJ_T0083237.1 MGP_CBAJ_G0031853.1 mouse_genomes_project 7 48880111 48888234 + MGP_CBAJ_P0083237 Pnkp protein_coding nonsense_mediated_decay MGP_CBAJ_T0083238.1 MGP_CBAJ_G0031853.1 mouse_genomes_project 7 48885254 48888232 + Pnkp protein_coding retained_intron MGP_CBAJ_T0083239.1 MGP_CBAJ_G0031853.1 mouse_genomes_project 7 48886006 48886953 + Pnkp protein_coding retained_intron MGP_CBAJ_T0083240.1 MGP_CBAJ_G0031853.1 mouse_genomes_project 7 48886958 48888234 + MGP_CBAJ_P0083240 Pnkp protein_coding non_stop_decay MGP_CBAJ_T0083241.1 MGP_CBAJ_G0031853.1 mouse_genomes_project 7 48887097 48888232 + MGP_CBAJ_P0083241 Pnkp protein_coding protein_coding MGP_CBAJ_T0083242.1 MGP_CBAJ_G0031853.1 mouse_genomes_project 7 48887280 48888254 + Pnkp protein_coding retained_intron MGP_CBAJ_T0015507.1 MGP_CBAJ_G0013619.1 mouse_genomes_project 7 24057061 24064932 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0085400.1 MGP_CBAJ_G0032525.1 mouse_genomes_project 7 122090432 122123938 + MGP_CBAJ_P0085400 Zfp143 protein_coding protein_coding MGP_CBAJ_T0085401.1 MGP_CBAJ_G0032525.1 mouse_genomes_project 7 122090440 122123933 + MGP_CBAJ_P0085401 Zfp143 protein_coding protein_coding MGP_CBAJ_T0010752.1 MGP_CBAJ_G0008890.1 mouse_genomes_project 7 63152962 63153064 + Mir6389 miRNA miRNA MGP_CBAJ_T0102188.1 MGP_CBAJ_G0040217.1 mouse_genomes_project 7 94898955 94899852 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0083596.1 MGP_CBAJ_G0031958.1 mouse_genomes_project 7 53014408 53015531 + MGP_CBAJ_P0083596 Mrgprb8 protein_coding protein_coding MGP_CBAJ_T0085289.1 MGP_CBAJ_G0032466.1 mouse_genomes_project 7 119069083 119138495 + MGP_CBAJ_P0085289 Syt9 protein_coding protein_coding MGP_CBAJ_T0085290.1 MGP_CBAJ_G0032466.1 mouse_genomes_project 7 119069145 119263598 + MGP_CBAJ_P0085290 Syt9 protein_coding protein_coding MGP_CBAJ_T0085291.1 MGP_CBAJ_G0032466.1 mouse_genomes_project 7 119069145 119263595 + MGP_CBAJ_P0085291 Syt9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085292.1 MGP_CBAJ_G0032466.1 mouse_genomes_project 7 119203775 119263595 + Syt9 protein_coding retained_intron MGP_CBAJ_T0085293.1 MGP_CBAJ_G0032466.1 mouse_genomes_project 7 119203809 119263595 + Syt9 protein_coding retained_intron MGP_CBAJ_T0083758.1 MGP_CBAJ_G0031996.1 mouse_genomes_project 7 68320789 68322441 + MGP_CBAJ_P0083758 Ndn protein_coding protein_coding MGP_CBAJ_T0084605.1 MGP_CBAJ_G0032198.1 mouse_genomes_project 7 107933672 108011000 + Pak1 protein_coding retained_intron MGP_CBAJ_T0084606.1 MGP_CBAJ_G0032198.1 mouse_genomes_project 7 107933672 108082249 + MGP_CBAJ_P0084606 Pak1 protein_coding protein_coding MGP_CBAJ_T0084607.1 MGP_CBAJ_G0032198.1 mouse_genomes_project 7 107982293 108024781 + MGP_CBAJ_P0084607 Pak1 protein_coding protein_coding MGP_CBAJ_T0084608.1 MGP_CBAJ_G0032198.1 mouse_genomes_project 7 107996320 108082747 + MGP_CBAJ_P0084608 Pak1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084609.1 MGP_CBAJ_G0032198.1 mouse_genomes_project 7 107996320 108082747 + MGP_CBAJ_P0084609 Pak1 protein_coding protein_coding MGP_CBAJ_T0084610.1 MGP_CBAJ_G0032198.1 mouse_genomes_project 7 108061203 108081648 + Pak1 protein_coding retained_intron MGP_CBAJ_T0083094.1 MGP_CBAJ_G0031830.1 mouse_genomes_project 7 48284484 48301962 - MGP_CBAJ_P0083094 1700008O03Rik protein_coding protein_coding MGP_CBAJ_T0083095.1 MGP_CBAJ_G0031830.1 mouse_genomes_project 7 48284540 48301446 - 1700008O03Rik protein_coding retained_intron MGP_CBAJ_T0083096.1 MGP_CBAJ_G0031830.1 mouse_genomes_project 7 48284678 48300532 - MGP_CBAJ_P0083096 1700008O03Rik protein_coding protein_coding MGP_CBAJ_T0083097.1 MGP_CBAJ_G0031830.1 mouse_genomes_project 7 48287117 48315230 - 1700008O03Rik protein_coding processed_transcript MGP_CBAJ_T0083098.1 MGP_CBAJ_G0031830.1 mouse_genomes_project 7 48308476 48315366 - 1700008O03Rik protein_coding processed_transcript MGP_CBAJ_T0084943.1 MGP_CBAJ_G0032269.1 mouse_genomes_project 7 112874640 112886728 + MGP_CBAJ_P0084943 Art1 protein_coding protein_coding MGP_CBAJ_T0081955.1 MGP_CBAJ_G0031549.1 mouse_genomes_project 7 25973942 26010024 - MGP_CBAJ_P0081955 Axl protein_coding protein_coding MGP_CBAJ_T0081956.1 MGP_CBAJ_G0031549.1 mouse_genomes_project 7 25974299 26010042 - MGP_CBAJ_P0081956 Axl protein_coding protein_coding MGP_CBAJ_T0081957.1 MGP_CBAJ_G0031549.1 mouse_genomes_project 7 25977347 25980755 - Axl protein_coding retained_intron MGP_CBAJ_T0081958.1 MGP_CBAJ_G0031549.1 mouse_genomes_project 7 25978038 25981104 - Axl protein_coding retained_intron MGP_CBAJ_T0081959.1 MGP_CBAJ_G0031549.1 mouse_genomes_project 7 25980484 26010037 - Axl protein_coding retained_intron MGP_CBAJ_T0081960.1 MGP_CBAJ_G0031549.1 mouse_genomes_project 7 25983156 25991310 - MGP_CBAJ_P0081960 Axl protein_coding protein_coding MGP_CBAJ_T0081961.1 MGP_CBAJ_G0031549.1 mouse_genomes_project 7 25997681 26008374 - Axl protein_coding retained_intron MGP_CBAJ_T0081962.1 MGP_CBAJ_G0031549.1 mouse_genomes_project 7 26007247 26008880 - Axl protein_coding retained_intron MGP_CBAJ_T0008790.1 MGP_CBAJ_G0007090.1 mouse_genomes_project 7 74792084 74800793 - Gm16157 lincRNA lincRNA MGP_CBAJ_T0008791.1 MGP_CBAJ_G0007090.1 mouse_genomes_project 7 74792697 74806857 - Gm16157 lincRNA lincRNA MGP_CBAJ_T0008914.1 MGP_CBAJ_G0007169.1 mouse_genomes_project 7 139216064 139217185 - Gm44766 lincRNA lincRNA MGP_CBAJ_T0085902.1 MGP_CBAJ_G0032633.1 mouse_genomes_project 7 136945224 136991995 + MGP_CBAJ_P0085902 Lcmt1 protein_coding protein_coding MGP_CBAJ_T0085903.1 MGP_CBAJ_G0032633.1 mouse_genomes_project 7 136953418 137020396 + MGP_CBAJ_P0085903 Lcmt1 protein_coding protein_coding MGP_CBAJ_T0085904.1 MGP_CBAJ_G0032633.1 mouse_genomes_project 7 136953492 137020387 + MGP_CBAJ_P0085904 Lcmt1 protein_coding protein_coding MGP_CBAJ_T0085905.1 MGP_CBAJ_G0032633.1 mouse_genomes_project 7 136998697 137012794 + Lcmt1 protein_coding processed_transcript MGP_CBAJ_T0085906.1 MGP_CBAJ_G0032633.1 mouse_genomes_project 7 137008180 137020382 + Lcmt1 protein_coding retained_intron MGP_CBAJ_T0085907.1 MGP_CBAJ_G0032633.1 mouse_genomes_project 7 137017897 137020386 + Lcmt1 protein_coding retained_intron MGP_CBAJ_T0008719.1 MGP_CBAJ_G0007033.1 mouse_genomes_project 7 30209606 30219539 + Gm26604 lincRNA lincRNA MGP_CBAJ_T0005097.1 MGP_CBAJ_G0004336.1 mouse_genomes_project 7 30300830 30302069 + 1110035H17Rik antisense pseudogene MGP_CBAJ_T0005098.1 MGP_CBAJ_G0004336.1 mouse_genomes_project 7 30300830 30302071 + 1110035H17Rik antisense antisense MGP_CBAJ_T0098083.1 MGP_CBAJ_G0036356.1 mouse_genomes_project 7 3933230 3933338 + n-R5s150 rRNA rRNA MGP_CBAJ_T0084135.1 MGP_CBAJ_G0032070.1 mouse_genomes_project 7 87893196 87905053 - MGP_CBAJ_P0084135 Arpin protein_coding protein_coding MGP_CBAJ_T0102127.1 MGP_CBAJ_G0040156.1 mouse_genomes_project 7 43953982 43958602 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081475.1 MGP_CBAJ_G0031418.1 mouse_genomes_project 7 18492315 18505375 - MGP_CBAJ_P0081475 Foxa3 protein_coding protein_coding MGP_CBAJ_T0086923.1 MGP_CBAJ_G0032834.1 mouse_genomes_project 7 155598886 155609484 - MGP_CBAJ_P0086923 Echs1 protein_coding protein_coding MGP_CBAJ_T0086924.1 MGP_CBAJ_G0032834.1 mouse_genomes_project 7 155598894 155609397 - Echs1 protein_coding retained_intron MGP_CBAJ_T0086925.1 MGP_CBAJ_G0032834.1 mouse_genomes_project 7 155599260 155606156 - MGP_CBAJ_P0086925 Echs1 protein_coding protein_coding MGP_CBAJ_T0086926.1 MGP_CBAJ_G0032834.1 mouse_genomes_project 7 155601914 155609423 - Echs1 protein_coding retained_intron MGP_CBAJ_T0086927.1 MGP_CBAJ_G0032834.1 mouse_genomes_project 7 155601914 155609423 - Echs1 protein_coding retained_intron MGP_CBAJ_T0086928.1 MGP_CBAJ_G0032834.1 mouse_genomes_project 7 155604888 155609415 - Echs1 protein_coding processed_transcript MGP_CBAJ_T0086590.1 MGP_CBAJ_G0032757.1 mouse_genomes_project 7 143123722 143166165 + MGP_CBAJ_P0086590 Sec23ip protein_coding protein_coding MGP_CBAJ_T0086591.1 MGP_CBAJ_G0032757.1 mouse_genomes_project 7 143123756 143128350 + Sec23ip protein_coding retained_intron MGP_CBAJ_T0086592.1 MGP_CBAJ_G0032757.1 mouse_genomes_project 7 143123814 143132908 + MGP_CBAJ_P0086592 Sec23ip protein_coding nonsense_mediated_decay MGP_CBAJ_T0086593.1 MGP_CBAJ_G0032757.1 mouse_genomes_project 7 143124199 143129148 + MGP_CBAJ_P0086593 Sec23ip protein_coding protein_coding MGP_CBAJ_T0085209.1 MGP_CBAJ_G0032429.1 mouse_genomes_project 7 117027380 117051256 + Dnhd1 protein_coding processed_transcript MGP_CBAJ_T0085215.1 MGP_CBAJ_G0032429.1 mouse_genomes_project 7 117027397 117081944 + Dnhd1 protein_coding processed_transcript MGP_CBAJ_T0085219.1 MGP_CBAJ_G0032429.1 mouse_genomes_project 7 117040346 117123746 + MGP_CBAJ_P0085219 Dnhd1 protein_coding protein_coding MGP_CBAJ_T0085220.1 MGP_CBAJ_G0032429.1 mouse_genomes_project 7 117040727 117123714 + MGP_CBAJ_P0085220 Dnhd1 protein_coding unknown_likely_coding MGP_CBAJ_T0085221.1 MGP_CBAJ_G0032429.1 mouse_genomes_project 7 117071509 117075734 + Dnhd1 protein_coding retained_intron MGP_CBAJ_T0085222.1 MGP_CBAJ_G0032429.1 mouse_genomes_project 7 117075557 117081937 + MGP_CBAJ_P0085222 Dnhd1 protein_coding protein_coding MGP_CBAJ_T0085844.1 MGP_CBAJ_G0032624.1 mouse_genomes_project 7 135619030 135636283 + MGP_CBAJ_P0085844 Plk1 protein_coding protein_coding MGP_CBAJ_T0085845.1 MGP_CBAJ_G0032624.1 mouse_genomes_project 7 135619098 135625881 + MGP_CBAJ_P0085845 Plk1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085846.1 MGP_CBAJ_G0032624.1 mouse_genomes_project 7 135619172 135621237 + MGP_CBAJ_P0085846 Plk1 protein_coding protein_coding MGP_CBAJ_T0081453.1 MGP_CBAJ_G0031410.1 mouse_genomes_project 7 18269032 18289614 + MGP_CBAJ_P0081453 Mill2 protein_coding protein_coding MGP_CBAJ_T0081454.1 MGP_CBAJ_G0031410.1 mouse_genomes_project 7 18269055 18294093 + MGP_CBAJ_P0081454 Mill2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081455.1 MGP_CBAJ_G0031410.1 mouse_genomes_project 7 18269058 18294094 + MGP_CBAJ_P0081455 Mill2 protein_coding unknown_likely_coding MGP_CBAJ_T0081456.1 MGP_CBAJ_G0031410.1 mouse_genomes_project 7 18269067 18284633 + Mill2 protein_coding processed_transcript MGP_CBAJ_T0085002.1 MGP_CBAJ_G0032299.1 mouse_genomes_project 7 113823879 113824848 - MGP_CBAJ_P0085002 Olfr571 protein_coding protein_coding MGP_CBAJ_T0081563.1 MGP_CBAJ_G0031439.1 mouse_genomes_project 7 18915120 18928743 + MGP_CBAJ_P0081563 Ercc2 protein_coding protein_coding MGP_CBAJ_T0081564.1 MGP_CBAJ_G0031439.1 mouse_genomes_project 7 18915128 18918819 + Ercc2 protein_coding processed_transcript MGP_CBAJ_T0081565.1 MGP_CBAJ_G0031439.1 mouse_genomes_project 7 18915141 18928741 + MGP_CBAJ_P0081565 Ercc2 protein_coding protein_coding MGP_CBAJ_T0081566.1 MGP_CBAJ_G0031439.1 mouse_genomes_project 7 18915150 18928743 + MGP_CBAJ_P0081566 Ercc2 protein_coding protein_coding MGP_CBAJ_T0081567.1 MGP_CBAJ_G0031439.1 mouse_genomes_project 7 18915317 18919024 + Ercc2 protein_coding processed_transcript MGP_CBAJ_T0081568.1 MGP_CBAJ_G0031439.1 mouse_genomes_project 7 18915378 18927510 + MGP_CBAJ_P0081568 Ercc2 protein_coding protein_coding MGP_CBAJ_T0081569.1 MGP_CBAJ_G0031439.1 mouse_genomes_project 7 18921297 18926729 + Ercc2 protein_coding processed_transcript MGP_CBAJ_T0081570.1 MGP_CBAJ_G0031439.1 mouse_genomes_project 7 18923482 18924966 + Ercc2 protein_coding retained_intron MGP_CBAJ_T0081571.1 MGP_CBAJ_G0031439.1 mouse_genomes_project 7 18926505 18927835 + Ercc2 protein_coding retained_intron MGP_CBAJ_T0081572.1 MGP_CBAJ_G0031439.1 mouse_genomes_project 7 18926709 18927114 + Ercc2 protein_coding retained_intron MGP_CBAJ_T0102159.1 MGP_CBAJ_G0040188.1 mouse_genomes_project 7 52864102 52871931 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0084991.1 MGP_CBAJ_G0032289.1 mouse_genomes_project 7 113570998 113580731 - MGP_CBAJ_P0084991 Trim68 protein_coding protein_coding MGP_CBAJ_T0085065.1 MGP_CBAJ_G0032360.1 mouse_genomes_project 7 115217227 115218166 + MGP_CBAJ_P0085065 Olfr641 protein_coding protein_coding MGP_CBAJ_T0015580.1 MGP_CBAJ_G0013692.1 mouse_genomes_project 7 48215446 48216419 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0082997.1 MGP_CBAJ_G0031796.1 mouse_genomes_project 7 47077279 47088117 + MGP_CBAJ_P0082997 Gm42419 protein_coding nonsense_mediated_decay MGP_CBAJ_T0008950.1 MGP_CBAJ_G0007193.1 mouse_genomes_project 7 149361320 149441295 - Gm4593 lincRNA lincRNA MGP_CBAJ_T0008951.1 MGP_CBAJ_G0007193.1 mouse_genomes_project 7 149440501 149443424 - Gm4593 lincRNA lincRNA MGP_CBAJ_T0008788.1 MGP_CBAJ_G0007088.1 mouse_genomes_project 7 73632498 73650833 - 1700112J16Rik lincRNA lincRNA MGP_CBAJ_T0084998.1 MGP_CBAJ_G0032295.1 mouse_genomes_project 7 113756164 113762777 - MGP_CBAJ_P0084998 Olfr566 protein_coding protein_coding MGP_CBAJ_T0085747.1 MGP_CBAJ_G0032599.1 mouse_genomes_project 7 133531819 133569631 + Abca15 protein_coding retained_intron MGP_CBAJ_T0085748.1 MGP_CBAJ_G0032599.1 mouse_genomes_project 7 133531819 133622241 + MGP_CBAJ_P0085748 Abca15 protein_coding protein_coding MGP_CBAJ_T0085749.1 MGP_CBAJ_G0032599.1 mouse_genomes_project 7 133531819 133622241 + MGP_CBAJ_P0085749 Abca15 protein_coding protein_coding MGP_CBAJ_T0086466.1 MGP_CBAJ_G0032735.1 mouse_genomes_project 7 142119721 142124440 + Kat8 protein_coding retained_intron MGP_CBAJ_T0086467.1 MGP_CBAJ_G0032735.1 mouse_genomes_project 7 142119721 142134174 + MGP_CBAJ_P0086467 Kat8 protein_coding protein_coding MGP_CBAJ_T0086468.1 MGP_CBAJ_G0032735.1 mouse_genomes_project 7 142121360 142128848 + MGP_CBAJ_P0086468 Kat8 protein_coding protein_coding MGP_CBAJ_T0086469.1 MGP_CBAJ_G0032735.1 mouse_genomes_project 7 142128124 142128916 + Kat8 protein_coding retained_intron MGP_CBAJ_T0081155.1 MGP_CBAJ_G0031308.1 mouse_genomes_project 7 10877580 10890093 - MGP_CBAJ_P0081155 Zscan18 protein_coding unknown_likely_coding MGP_CBAJ_T0084985.1 MGP_CBAJ_G0032283.1 mouse_genomes_project 7 113457673 113458752 - MGP_CBAJ_P0084985 Olfr551 protein_coding protein_coding MGP_CBAJ_T0086300.1 MGP_CBAJ_G0032702.1 mouse_genomes_project 7 141371888 141413016 + MGP_CBAJ_P0086300 Itgal protein_coding protein_coding MGP_CBAJ_T0086301.1 MGP_CBAJ_G0032702.1 mouse_genomes_project 7 141371919 141413017 + MGP_CBAJ_P0086301 Itgal protein_coding protein_coding MGP_CBAJ_T0086302.1 MGP_CBAJ_G0032702.1 mouse_genomes_project 7 141371943 141409170 + MGP_CBAJ_P0086302 Itgal protein_coding protein_coding MGP_CBAJ_T0086303.1 MGP_CBAJ_G0032702.1 mouse_genomes_project 7 141372038 141411607 + MGP_CBAJ_P0086303 Itgal protein_coding protein_coding MGP_CBAJ_T0086304.1 MGP_CBAJ_G0032702.1 mouse_genomes_project 7 141373058 141375217 + Itgal protein_coding processed_transcript MGP_CBAJ_T0086305.1 MGP_CBAJ_G0032702.1 mouse_genomes_project 7 141384982 141413016 + MGP_CBAJ_P0086305 Itgal protein_coding protein_coding MGP_CBAJ_T0081059.1 MGP_CBAJ_G0031255.1 mouse_genomes_project 7 3525534 3542332 + MGP_CBAJ_P0081059 Zfp444 protein_coding protein_coding MGP_CBAJ_T0081060.1 MGP_CBAJ_G0031255.1 mouse_genomes_project 7 3525790 3548767 + MGP_CBAJ_P0081060 Zfp444 protein_coding protein_coding MGP_CBAJ_T0081061.1 MGP_CBAJ_G0031255.1 mouse_genomes_project 7 3525810 3549684 + MGP_CBAJ_P0081061 Zfp444 protein_coding protein_coding MGP_CBAJ_T0081062.1 MGP_CBAJ_G0031255.1 mouse_genomes_project 7 3525821 3548766 + MGP_CBAJ_P0081062 Zfp444 protein_coding protein_coding MGP_CBAJ_T0081063.1 MGP_CBAJ_G0031255.1 mouse_genomes_project 7 3527086 3542204 + MGP_CBAJ_P0081063 Zfp444 protein_coding protein_coding MGP_CBAJ_T0081064.1 MGP_CBAJ_G0031255.1 mouse_genomes_project 7 3527259 3542812 + Zfp444 protein_coding processed_transcript MGP_CBAJ_T0081065.1 MGP_CBAJ_G0031255.1 mouse_genomes_project 7 3527314 3548191 + MGP_CBAJ_P0081065 Zfp444 protein_coding protein_coding MGP_CBAJ_T0081066.1 MGP_CBAJ_G0031255.1 mouse_genomes_project 7 3539836 3546503 + MGP_CBAJ_P0081066 Zfp444 protein_coding protein_coding MGP_CBAJ_T0081067.1 MGP_CBAJ_G0031255.1 mouse_genomes_project 7 3541956 3546578 + MGP_CBAJ_P0081067 Zfp444 protein_coding protein_coding MGP_CBAJ_T0085334.1 MGP_CBAJ_G0032504.1 mouse_genomes_project 7 120770399 120771454 - MGP_CBAJ_P0085334 Olfr517 protein_coding protein_coding MGP_CBAJ_T0086829.1 MGP_CBAJ_G0032813.1 mouse_genomes_project 7 154206337 154231925 + Ppp2r2d protein_coding retained_intron MGP_CBAJ_T0086830.1 MGP_CBAJ_G0032813.1 mouse_genomes_project 7 154206644 154230007 + MGP_CBAJ_P0086830 Ppp2r2d protein_coding nonsense_mediated_decay MGP_CBAJ_T0086831.1 MGP_CBAJ_G0032813.1 mouse_genomes_project 7 154206767 154242712 + MGP_CBAJ_P0086831 Ppp2r2d protein_coding protein_coding MGP_CBAJ_T0086832.1 MGP_CBAJ_G0032813.1 mouse_genomes_project 7 154206845 154230050 + Ppp2r2d protein_coding processed_transcript MGP_CBAJ_T0086833.1 MGP_CBAJ_G0032813.1 mouse_genomes_project 7 154206878 154236791 + MGP_CBAJ_P0086833 Ppp2r2d protein_coding nonsense_mediated_decay MGP_CBAJ_T0086834.1 MGP_CBAJ_G0032813.1 mouse_genomes_project 7 154207118 154230025 + Ppp2r2d protein_coding processed_transcript MGP_CBAJ_T0086835.1 MGP_CBAJ_G0032813.1 mouse_genomes_project 7 154228632 154236785 + MGP_CBAJ_P0086835 Ppp2r2d protein_coding nonsense_mediated_decay MGP_CBAJ_T0102196.1 MGP_CBAJ_G0040225.1 mouse_genomes_project 7 113406454 113407389 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081439.1 MGP_CBAJ_G0031400.1 mouse_genomes_project 7 17585981 17591961 - MGP_CBAJ_P0081439 protein_coding protein_coding MGP_CBAJ_T0102130.1 MGP_CBAJ_G0040159.1 mouse_genomes_project 7 45641588 45645886 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085309.1 MGP_CBAJ_G0032480.1 mouse_genomes_project 7 119840065 119841094 - MGP_CBAJ_P0085309 Olfr480 protein_coding protein_coding MGP_CBAJ_T0085872.1 MGP_CBAJ_G0032630.1 mouse_genomes_project 7 136685750 136728214 + Tnrc6a protein_coding processed_transcript MGP_CBAJ_T0085873.1 MGP_CBAJ_G0032630.1 mouse_genomes_project 7 136686042 136759889 + MGP_CBAJ_P0085873 Tnrc6a protein_coding protein_coding MGP_CBAJ_T0085874.1 MGP_CBAJ_G0032630.1 mouse_genomes_project 7 136686046 136761198 + MGP_CBAJ_P0085874 Tnrc6a protein_coding protein_coding MGP_CBAJ_T0085875.1 MGP_CBAJ_G0032630.1 mouse_genomes_project 7 136686121 136743578 + MGP_CBAJ_P0085875 Tnrc6a protein_coding nonsense_mediated_decay MGP_CBAJ_T0085876.1 MGP_CBAJ_G0032630.1 mouse_genomes_project 7 136735007 136736790 + Tnrc6a protein_coding retained_intron MGP_CBAJ_T0085877.1 MGP_CBAJ_G0032630.1 mouse_genomes_project 7 136736516 136759880 + MGP_CBAJ_P0085877 Tnrc6a protein_coding protein_coding MGP_CBAJ_T0085878.1 MGP_CBAJ_G0032630.1 mouse_genomes_project 7 136737272 136741584 + Tnrc6a protein_coding retained_intron MGP_CBAJ_T0085879.1 MGP_CBAJ_G0032630.1 mouse_genomes_project 7 136737531 136740318 + Tnrc6a protein_coding retained_intron MGP_CBAJ_T0085880.1 MGP_CBAJ_G0032630.1 mouse_genomes_project 7 136738743 136740083 + Tnrc6a protein_coding retained_intron MGP_CBAJ_T0085881.1 MGP_CBAJ_G0032630.1 mouse_genomes_project 7 136740100 136746507 + MGP_CBAJ_P0085881 Tnrc6a protein_coding protein_coding MGP_CBAJ_T0085882.1 MGP_CBAJ_G0032630.1 mouse_genomes_project 7 136745806 136759633 + Tnrc6a protein_coding retained_intron MGP_CBAJ_T0084378.1 MGP_CBAJ_G0032120.1 mouse_genomes_project 7 92114102 92126766 - Il16 protein_coding retained_intron MGP_CBAJ_T0084379.1 MGP_CBAJ_G0032120.1 mouse_genomes_project 7 92114318 92207937 - MGP_CBAJ_P0084379 Il16 protein_coding protein_coding MGP_CBAJ_T0084380.1 MGP_CBAJ_G0032120.1 mouse_genomes_project 7 92120839 92126596 - Il16 protein_coding retained_intron MGP_CBAJ_T0084381.1 MGP_CBAJ_G0032120.1 mouse_genomes_project 7 92132162 92218726 - MGP_CBAJ_P0084381 Il16 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084382.1 MGP_CBAJ_G0032120.1 mouse_genomes_project 7 92194911 92204809 - MGP_CBAJ_P0084382 Il16 protein_coding protein_coding MGP_CBAJ_T0084383.1 MGP_CBAJ_G0032120.1 mouse_genomes_project 7 92194911 92212925 - MGP_CBAJ_P0084383 Il16 protein_coding protein_coding MGP_CBAJ_T0005055.1 MGP_CBAJ_G0004309.1 mouse_genomes_project 7 1216411 1270919 - 9430041J12Rik antisense antisense MGP_CBAJ_T0005056.1 MGP_CBAJ_G0004309.1 mouse_genomes_project 7 1216441 1270633 - 9430041J12Rik antisense antisense MGP_CBAJ_T0005057.1 MGP_CBAJ_G0004309.1 mouse_genomes_project 7 1216750 1270633 - 9430041J12Rik antisense antisense MGP_CBAJ_T0005058.1 MGP_CBAJ_G0004309.1 mouse_genomes_project 7 1270095 1270633 - 9430041J12Rik antisense pseudogene MGP_CBAJ_T0084425.1 MGP_CBAJ_G0032146.1 mouse_genomes_project 7 95349037 95350059 + MGP_CBAJ_P0084425 Olfr297 protein_coding protein_coding MGP_CBAJ_T0008722.1 MGP_CBAJ_G0007036.1 mouse_genomes_project 7 32080730 32083659 + Gm26610 lincRNA lincRNA MGP_CBAJ_T0005093.1 MGP_CBAJ_G0004332.1 mouse_genomes_project 7 27911426 27920105 - Gm15567 antisense antisense MGP_CBAJ_T0008759.1 MGP_CBAJ_G0007065.1 mouse_genomes_project 7 43856595 43865845 + Gm28307 lincRNA lincRNA MGP_CBAJ_T0084166.1 MGP_CBAJ_G0032078.1 mouse_genomes_project 7 88308827 88332228 + MGP_CBAJ_P0084166 Vps33b protein_coding protein_coding MGP_CBAJ_T0084167.1 MGP_CBAJ_G0032078.1 mouse_genomes_project 7 88308857 88332226 + MGP_CBAJ_P0084167 Vps33b protein_coding nonsense_mediated_decay MGP_CBAJ_T0084168.1 MGP_CBAJ_G0032078.1 mouse_genomes_project 7 88308912 88326406 + Vps33b protein_coding retained_intron MGP_CBAJ_T0084169.1 MGP_CBAJ_G0032078.1 mouse_genomes_project 7 88308918 88332224 + MGP_CBAJ_P0084169 Vps33b protein_coding nonsense_mediated_decay MGP_CBAJ_T0084170.1 MGP_CBAJ_G0032078.1 mouse_genomes_project 7 88313486 88324731 + Vps33b protein_coding processed_transcript MGP_CBAJ_T0084171.1 MGP_CBAJ_G0032078.1 mouse_genomes_project 7 88330680 88332403 + MGP_CBAJ_P0084171 Vps33b protein_coding protein_coding MGP_CBAJ_T0084172.1 MGP_CBAJ_G0032078.1 mouse_genomes_project 7 88330728 88331551 + Vps33b protein_coding retained_intron MGP_CBAJ_T0015586.1 MGP_CBAJ_G0013698.1 mouse_genomes_project 7 57872230 57872471 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0083367.1 MGP_CBAJ_G0031897.1 mouse_genomes_project 7 49615886 49652996 + MGP_CBAJ_P0083367 Tulp2 protein_coding protein_coding MGP_CBAJ_T0083368.1 MGP_CBAJ_G0031897.1 mouse_genomes_project 7 49615887 49652449 + MGP_CBAJ_P0083368 Tulp2 protein_coding protein_coding MGP_CBAJ_T0083369.1 MGP_CBAJ_G0031897.1 mouse_genomes_project 7 49615988 49652451 + MGP_CBAJ_P0083369 Tulp2 protein_coding protein_coding MGP_CBAJ_T0083379.1 MGP_CBAJ_G0031897.1 mouse_genomes_project 7 49642987 49652663 + MGP_CBAJ_P0083379 Tulp2 protein_coding protein_coding MGP_CBAJ_T0083380.1 MGP_CBAJ_G0031897.1 mouse_genomes_project 7 49643005 49652456 + MGP_CBAJ_P0083380 Tulp2 protein_coding protein_coding MGP_CBAJ_T0083381.1 MGP_CBAJ_G0031897.1 mouse_genomes_project 7 49643862 49645969 + MGP_CBAJ_P0083381 Tulp2 protein_coding protein_coding MGP_CBAJ_T0083382.1 MGP_CBAJ_G0031897.1 mouse_genomes_project 7 49643883 49652451 + MGP_CBAJ_P0083382 Tulp2 protein_coding protein_coding MGP_CBAJ_T0083383.1 MGP_CBAJ_G0031897.1 mouse_genomes_project 7 49643887 49647227 + MGP_CBAJ_P0083383 Tulp2 protein_coding protein_coding MGP_CBAJ_T0083384.1 MGP_CBAJ_G0031897.1 mouse_genomes_project 7 49643918 49653701 + MGP_CBAJ_P0083384 Tulp2 protein_coding protein_coding MGP_CBAJ_T0083385.1 MGP_CBAJ_G0031897.1 mouse_genomes_project 7 49645089 49645602 + Tulp2 protein_coding processed_transcript MGP_CBAJ_T0010741.1 MGP_CBAJ_G0008879.1 mouse_genomes_project 7 48514118 48514191 - Mir7053 miRNA miRNA MGP_CBAJ_T0084533.1 MGP_CBAJ_G0032184.1 mouse_genomes_project 7 106171014 106961858 + MGP_CBAJ_P0084533 Tenm4 protein_coding protein_coding MGP_CBAJ_T0084534.1 MGP_CBAJ_G0032184.1 mouse_genomes_project 7 106207117 106458010 + Tenm4 protein_coding retained_intron MGP_CBAJ_T0084535.1 MGP_CBAJ_G0032184.1 mouse_genomes_project 7 106207167 106528148 + Tenm4 protein_coding processed_transcript MGP_CBAJ_T0084536.1 MGP_CBAJ_G0032184.1 mouse_genomes_project 7 106207650 106459838 + Tenm4 protein_coding retained_intron MGP_CBAJ_T0084537.1 MGP_CBAJ_G0032184.1 mouse_genomes_project 7 106207658 106585377 + MGP_CBAJ_P0084537 Tenm4 protein_coding protein_coding MGP_CBAJ_T0084538.1 MGP_CBAJ_G0032184.1 mouse_genomes_project 7 106208141 106964376 + MGP_CBAJ_P0084538 Tenm4 protein_coding protein_coding MGP_CBAJ_T0084539.1 MGP_CBAJ_G0032184.1 mouse_genomes_project 7 106209175 106961847 + MGP_CBAJ_P0084539 Tenm4 protein_coding protein_coding MGP_CBAJ_T0084540.1 MGP_CBAJ_G0032184.1 mouse_genomes_project 7 106554395 106585377 + MGP_CBAJ_P0084540 Tenm4 protein_coding protein_coding MGP_CBAJ_T0084541.1 MGP_CBAJ_G0032184.1 mouse_genomes_project 7 106684652 106778165 + Tenm4 protein_coding retained_intron MGP_CBAJ_T0084542.1 MGP_CBAJ_G0032184.1 mouse_genomes_project 7 106827408 106846735 + MGP_CBAJ_P0084542 Tenm4 protein_coding protein_coding MGP_CBAJ_T0084543.1 MGP_CBAJ_G0032184.1 mouse_genomes_project 7 106845608 106847573 + Tenm4 protein_coding processed_transcript MGP_CBAJ_T0084544.1 MGP_CBAJ_G0032184.1 mouse_genomes_project 7 106845608 106894813 + Tenm4 protein_coding retained_intron MGP_CBAJ_T0081701.1 MGP_CBAJ_G0031488.1 mouse_genomes_project 7 24091948 24108600 - MGP_CBAJ_P0081701 Zfp111 protein_coding protein_coding MGP_CBAJ_T0081702.1 MGP_CBAJ_G0031488.1 mouse_genomes_project 7 24094872 24104033 - MGP_CBAJ_P0081702 Zfp111 protein_coding protein_coding MGP_CBAJ_T0081703.1 MGP_CBAJ_G0031488.1 mouse_genomes_project 7 24096080 24111802 - MGP_CBAJ_P0081703 Zfp111 protein_coding protein_coding MGP_CBAJ_T0081704.1 MGP_CBAJ_G0031488.1 mouse_genomes_project 7 24097625 24108522 - Zfp111 protein_coding processed_transcript MGP_CBAJ_T0081705.1 MGP_CBAJ_G0031488.1 mouse_genomes_project 7 24104794 24108578 - Zfp111 protein_coding retained_intron MGP_CBAJ_T0081706.1 MGP_CBAJ_G0031488.1 mouse_genomes_project 7 24106188 24111802 - Zfp111 protein_coding processed_transcript MGP_CBAJ_T0080802.1 MGP_CBAJ_G0031190.1 mouse_genomes_project 7 690494 702307 - MGP_CBAJ_P0080802 Tmc4 protein_coding protein_coding MGP_CBAJ_T0080803.1 MGP_CBAJ_G0031190.1 mouse_genomes_project 7 690502 691595 - MGP_CBAJ_P0080803 Tmc4 protein_coding protein_coding MGP_CBAJ_T0080804.1 MGP_CBAJ_G0031190.1 mouse_genomes_project 7 690669 695346 - Tmc4 protein_coding retained_intron MGP_CBAJ_T0080805.1 MGP_CBAJ_G0031190.1 mouse_genomes_project 7 695440 701456 - Tmc4 protein_coding retained_intron MGP_CBAJ_T0080806.1 MGP_CBAJ_G0031190.1 mouse_genomes_project 7 695554 702353 - Tmc4 protein_coding retained_intron MGP_CBAJ_T0080807.1 MGP_CBAJ_G0031190.1 mouse_genomes_project 7 700000 702313 - Tmc4 protein_coding retained_intron MGP_CBAJ_T0084424.1 MGP_CBAJ_G0032145.1 mouse_genomes_project 7 95312737 95313736 - MGP_CBAJ_P0084424 Olfr298 protein_coding protein_coding MGP_CBAJ_T0102119.1 MGP_CBAJ_G0040148.1 mouse_genomes_project 7 35896852 35898034 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0084812.1 MGP_CBAJ_G0032249.1 mouse_genomes_project 7 111923972 111939722 - MGP_CBAJ_P0084812 Atg16l2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084813.1 MGP_CBAJ_G0032249.1 mouse_genomes_project 7 111924195 111939783 - MGP_CBAJ_P0084813 Atg16l2 protein_coding protein_coding MGP_CBAJ_T0084814.1 MGP_CBAJ_G0032249.1 mouse_genomes_project 7 111924197 111925040 - Atg16l2 protein_coding retained_intron MGP_CBAJ_T0084815.1 MGP_CBAJ_G0032249.1 mouse_genomes_project 7 111924197 111939766 - MGP_CBAJ_P0084815 Atg16l2 protein_coding protein_coding MGP_CBAJ_T0084816.1 MGP_CBAJ_G0032249.1 mouse_genomes_project 7 111924206 111939946 - MGP_CBAJ_P0084816 Atg16l2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084817.1 MGP_CBAJ_G0032249.1 mouse_genomes_project 7 111924408 111925157 - Atg16l2 protein_coding retained_intron MGP_CBAJ_T0084818.1 MGP_CBAJ_G0032249.1 mouse_genomes_project 7 111924427 111939722 - MGP_CBAJ_P0084818 Atg16l2 protein_coding unknown_likely_coding MGP_CBAJ_T0084819.1 MGP_CBAJ_G0032249.1 mouse_genomes_project 7 111925224 111926882 - Atg16l2 protein_coding retained_intron MGP_CBAJ_T0084820.1 MGP_CBAJ_G0032249.1 mouse_genomes_project 7 111925731 111926885 - Atg16l2 protein_coding retained_intron MGP_CBAJ_T0084821.1 MGP_CBAJ_G0032249.1 mouse_genomes_project 7 111926313 111927127 - Atg16l2 protein_coding retained_intron MGP_CBAJ_T0084822.1 MGP_CBAJ_G0032249.1 mouse_genomes_project 7 111926742 111934437 - Atg16l2 protein_coding retained_intron MGP_CBAJ_T0084823.1 MGP_CBAJ_G0032249.1 mouse_genomes_project 7 111927141 111934450 - MGP_CBAJ_P0084823 Atg16l2 protein_coding protein_coding MGP_CBAJ_T0084824.1 MGP_CBAJ_G0032249.1 mouse_genomes_project 7 111928117 111934379 - Atg16l2 protein_coding retained_intron MGP_CBAJ_T0084825.1 MGP_CBAJ_G0032249.1 mouse_genomes_project 7 111933894 111934837 - Atg16l2 protein_coding retained_intron MGP_CBAJ_T0084826.1 MGP_CBAJ_G0032249.1 mouse_genomes_project 7 111934562 111939766 - MGP_CBAJ_P0084826 Atg16l2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085023.1 MGP_CBAJ_G0032318.1 mouse_genomes_project 7 114329870 114334808 + MGP_CBAJ_P0085023 protein_coding protein_coding MGP_CBAJ_T0099498.1 MGP_CBAJ_G0037753.1 mouse_genomes_project 7 85575184 85575365 - Gm23239 snRNA snRNA MGP_CBAJ_T0085337.1 MGP_CBAJ_G0032507.1 mouse_genomes_project 7 120851874 120860409 + MGP_CBAJ_P0085337 Eif3f protein_coding protein_coding MGP_CBAJ_T0085338.1 MGP_CBAJ_G0032507.1 mouse_genomes_project 7 120855852 120857934 + Eif3f protein_coding retained_intron MGP_CBAJ_T0085339.1 MGP_CBAJ_G0032507.1 mouse_genomes_project 7 120857765 120858466 + Eif3f protein_coding retained_intron MGP_CBAJ_T0102166.1 MGP_CBAJ_G0040195.1 mouse_genomes_project 7 93381924 93382940 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0084978.1 MGP_CBAJ_G0032277.1 mouse_genomes_project 7 113349437 113353834 - MGP_CBAJ_P0084978 Olfr544 protein_coding protein_coding MGP_CBAJ_T0102078.1 MGP_CBAJ_G0040108.1 mouse_genomes_project 7 12784211 12787466 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015642.1 MGP_CBAJ_G0013754.1 mouse_genomes_project 7 107507709 107507897 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0081510.1 MGP_CBAJ_G0031424.1 mouse_genomes_project 7 18594210 18613472 - MGP_CBAJ_P0081510 Gm4969 protein_coding protein_coding MGP_CBAJ_T0081511.1 MGP_CBAJ_G0031424.1 mouse_genomes_project 7 18596715 18613445 - MGP_CBAJ_P0081511 Gm4969 protein_coding nonsense_mediated_decay MGP_CBAJ_T0098452.1 MGP_CBAJ_G0036714.1 mouse_genomes_project 7 79144052 79145092 - sense_intronic sense_intronic MGP_CBAJ_T0085310.1 MGP_CBAJ_G0032481.1 mouse_genomes_project 7 119858195 119859134 + MGP_CBAJ_P0085310 Olfr481 protein_coding protein_coding MGP_CBAJ_T0011551.1 MGP_CBAJ_G0009689.1 mouse_genomes_project 7 11524592 11524872 + Gm24909 misc_RNA misc_RNA MGP_CBAJ_T0002231.1 MGP_CBAJ_G0002145.1 mouse_genomes_project 7 85925086 85927477 - TEC TEC MGP_CBAJ_T0080775.1 MGP_CBAJ_G0031185.1 mouse_genomes_project 7 638036 640959 + MGP_CBAJ_P0080775 Ndufa3 protein_coding protein_coding MGP_CBAJ_T0080776.1 MGP_CBAJ_G0031185.1 mouse_genomes_project 7 638043 640784 + Ndufa3 protein_coding retained_intron MGP_CBAJ_T0080777.1 MGP_CBAJ_G0031185.1 mouse_genomes_project 7 638048 638369 + Ndufa3 protein_coding retained_intron MGP_CBAJ_T0080778.1 MGP_CBAJ_G0031185.1 mouse_genomes_project 7 638049 640760 + MGP_CBAJ_P0080778 Ndufa3 protein_coding protein_coding MGP_CBAJ_T0080779.1 MGP_CBAJ_G0031185.1 mouse_genomes_project 7 638054 640795 + MGP_CBAJ_P0080779 Ndufa3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080780.1 MGP_CBAJ_G0031185.1 mouse_genomes_project 7 638280 640717 + MGP_CBAJ_P0080780 Ndufa3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083070.1 MGP_CBAJ_G0031823.1 mouse_genomes_project 7 47671243 47677628 + MGP_CBAJ_P0083070 Klk15 protein_coding protein_coding MGP_CBAJ_T0083071.1 MGP_CBAJ_G0031823.1 mouse_genomes_project 7 47671296 47676719 + MGP_CBAJ_P0083071 Klk15 protein_coding protein_coding MGP_CBAJ_T0085251.1 MGP_CBAJ_G0032435.1 mouse_genomes_project 7 117215458 117219900 - MGP_CBAJ_P0085251 Mrpl17 protein_coding protein_coding MGP_CBAJ_T0085252.1 MGP_CBAJ_G0032435.1 mouse_genomes_project 7 117218457 117219759 - MGP_CBAJ_P0085252 Mrpl17 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085253.1 MGP_CBAJ_G0032435.1 mouse_genomes_project 7 117218480 117219797 - Mrpl17 protein_coding retained_intron MGP_CBAJ_T0085254.1 MGP_CBAJ_G0032435.1 mouse_genomes_project 7 117218565 117219800 - Mrpl17 protein_coding processed_transcript MGP_CBAJ_T0085255.1 MGP_CBAJ_G0032435.1 mouse_genomes_project 7 117218921 117219829 - MGP_CBAJ_P0085255 Mrpl17 protein_coding protein_coding MGP_CBAJ_T0081136.1 MGP_CBAJ_G0031295.1 mouse_genomes_project 7 10199576 10200518 + MGP_CBAJ_P0081136 Vmn1r78 protein_coding protein_coding MGP_CBAJ_T0080884.1 MGP_CBAJ_G0031203.1 mouse_genomes_project 7 1483864 1493487 + MGP_CBAJ_P0080884 Ncr1 protein_coding protein_coding MGP_CBAJ_T0080885.1 MGP_CBAJ_G0031203.1 mouse_genomes_project 7 1483909 1493487 + MGP_CBAJ_P0080885 Ncr1 protein_coding protein_coding MGP_CBAJ_T0083542.1 MGP_CBAJ_G0031940.1 mouse_genomes_project 7 51050920 51055336 - MGP_CBAJ_P0083542 Saa4 protein_coding protein_coding MGP_CBAJ_T0081134.1 MGP_CBAJ_G0031293.1 mouse_genomes_project 7 9842497 9843415 + MGP_CBAJ_P0081134 Vmn1r75 protein_coding protein_coding MGP_CBAJ_T0083087.1 MGP_CBAJ_G0031829.1 mouse_genomes_project 7 48229178 48285014 + MGP_CBAJ_P0083087 Shank1 protein_coding protein_coding MGP_CBAJ_T0083088.1 MGP_CBAJ_G0031829.1 mouse_genomes_project 7 48231598 48282053 + MGP_CBAJ_P0083088 Shank1 protein_coding protein_coding MGP_CBAJ_T0083089.1 MGP_CBAJ_G0031829.1 mouse_genomes_project 7 48231617 48281903 + MGP_CBAJ_P0083089 Shank1 protein_coding protein_coding MGP_CBAJ_T0083090.1 MGP_CBAJ_G0031829.1 mouse_genomes_project 7 48257661 48268392 + Shank1 protein_coding processed_transcript MGP_CBAJ_T0083091.1 MGP_CBAJ_G0031829.1 mouse_genomes_project 7 48260735 48284335 + MGP_CBAJ_P0083091 Shank1 protein_coding unknown_likely_coding MGP_CBAJ_T0083092.1 MGP_CBAJ_G0031829.1 mouse_genomes_project 7 48266788 48275924 + Shank1 protein_coding retained_intron MGP_CBAJ_T0083093.1 MGP_CBAJ_G0031829.1 mouse_genomes_project 7 48275327 48276623 + Shank1 protein_coding retained_intron MGP_CBAJ_T0086016.1 MGP_CBAJ_G0032654.1 mouse_genomes_project 7 140429120 140433318 + MGP_CBAJ_P0086016 protein_coding protein_coding MGP_CBAJ_T0099519.1 MGP_CBAJ_G0037774.1 mouse_genomes_project 7 134319282 134319385 - Gm25924 snRNA snRNA MGP_CBAJ_T0081989.1 MGP_CBAJ_G0031561.1 mouse_genomes_project 7 27114903 27135974 - MGP_CBAJ_P0081989 Cyp2b23 protein_coding protein_coding MGP_CBAJ_T0005205.1 MGP_CBAJ_G0004410.1 mouse_genomes_project 7 135402105 135409439 + Gm44987 antisense antisense MGP_CBAJ_T0005082.1 MGP_CBAJ_G0004324.1 mouse_genomes_project 7 23872228 23945110 - antisense antisense MGP_CBAJ_T0085636.1 MGP_CBAJ_G0032569.1 mouse_genomes_project 7 131461382 131468222 - MGP_CBAJ_P0085636 Itpripl2 protein_coding protein_coding MGP_CBAJ_T0008806.1 MGP_CBAJ_G0007101.1 mouse_genomes_project 7 79710280 79710585 - Gm28745 lincRNA lincRNA MGP_CBAJ_T0002181.1 MGP_CBAJ_G0002096.1 mouse_genomes_project 7 42993061 42996438 - TEC TEC MGP_CBAJ_T0085003.1 MGP_CBAJ_G0032300.1 mouse_genomes_project 7 113844406 113845363 + MGP_CBAJ_P0085003 Olfr572 protein_coding protein_coding MGP_CBAJ_T0085275.1 MGP_CBAJ_G0032453.1 mouse_genomes_project 7 118613400 118614207 - MGP_CBAJ_P0085275 protein_coding protein_coding MGP_CBAJ_T0082400.1 MGP_CBAJ_G0031666.1 mouse_genomes_project 7 31398101 31401377 - Zfp82 protein_coding retained_intron MGP_CBAJ_T0082401.1 MGP_CBAJ_G0031666.1 mouse_genomes_project 7 31399641 31425680 - MGP_CBAJ_P0082401 Zfp82 protein_coding protein_coding MGP_CBAJ_T0082403.1 MGP_CBAJ_G0031666.1 mouse_genomes_project 7 31399648 31404920 - Zfp82 protein_coding retained_intron MGP_CBAJ_T0082404.1 MGP_CBAJ_G0031666.1 mouse_genomes_project 7 31399650 31424922 - MGP_CBAJ_P0082404 Zfp82 protein_coding protein_coding MGP_CBAJ_T0082405.1 MGP_CBAJ_G0031666.1 mouse_genomes_project 7 31400883 31425590 - MGP_CBAJ_P0082405 Zfp82 protein_coding protein_coding MGP_CBAJ_T0082406.1 MGP_CBAJ_G0031666.1 mouse_genomes_project 7 31402853 31425608 - MGP_CBAJ_P0082406 Zfp82 protein_coding protein_coding MGP_CBAJ_T0084904.1 MGP_CBAJ_G0032261.1 mouse_genomes_project 7 112657021 112665253 - MGP_CBAJ_P0084904 Lrrc51 protein_coding protein_coding MGP_CBAJ_T0084905.1 MGP_CBAJ_G0032261.1 mouse_genomes_project 7 112657026 112664815 - MGP_CBAJ_P0084905 Lrrc51 protein_coding protein_coding MGP_CBAJ_T0084906.1 MGP_CBAJ_G0032261.1 mouse_genomes_project 7 112657026 112680050 - MGP_CBAJ_P0084906 Lrrc51 protein_coding protein_coding MGP_CBAJ_T0084907.1 MGP_CBAJ_G0032261.1 mouse_genomes_project 7 112657026 112665266 - MGP_CBAJ_P0084907 Lrrc51 protein_coding protein_coding MGP_CBAJ_T0084908.1 MGP_CBAJ_G0032261.1 mouse_genomes_project 7 112657027 112679993 - MGP_CBAJ_P0084908 Lrrc51 protein_coding protein_coding MGP_CBAJ_T0084909.1 MGP_CBAJ_G0032261.1 mouse_genomes_project 7 112657027 112680055 - MGP_CBAJ_P0084909 Lrrc51 protein_coding protein_coding MGP_CBAJ_T0084910.1 MGP_CBAJ_G0032261.1 mouse_genomes_project 7 112657031 112665224 - MGP_CBAJ_P0084910 Lrrc51 protein_coding protein_coding MGP_CBAJ_T0084911.1 MGP_CBAJ_G0032261.1 mouse_genomes_project 7 112657038 112680082 - Lrrc51 protein_coding processed_transcript MGP_CBAJ_T0084912.1 MGP_CBAJ_G0032261.1 mouse_genomes_project 7 112657195 112679989 - MGP_CBAJ_P0084912 Lrrc51 protein_coding protein_coding MGP_CBAJ_T0084913.1 MGP_CBAJ_G0032261.1 mouse_genomes_project 7 112657211 112680017 - MGP_CBAJ_P0084913 Lrrc51 protein_coding protein_coding MGP_CBAJ_T0085150.1 MGP_CBAJ_G0032417.1 mouse_genomes_project 7 116710109 116711235 + MGP_CBAJ_P0085150 Olfr692 protein_coding protein_coding MGP_CBAJ_T0083602.1 MGP_CBAJ_G0031961.1 mouse_genomes_project 7 53188249 53195365 - MGP_CBAJ_P0083602 Mrgprb2 protein_coding protein_coding MGP_CBAJ_T0102192.1 MGP_CBAJ_G0040221.1 mouse_genomes_project 7 95263537 95264444 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085331.1 MGP_CBAJ_G0032502.1 mouse_genomes_project 7 120748863 120749808 - MGP_CBAJ_P0085331 Olfr516 protein_coding protein_coding MGP_CBAJ_T0101370.1 MGP_CBAJ_G0039443.1 mouse_genomes_project 7 15598139 15606655 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101371.1 MGP_CBAJ_G0039443.1 mouse_genomes_project 7 15598497 15600913 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0085285.1 MGP_CBAJ_G0032463.1 mouse_genomes_project 7 118833268 118834372 + MGP_CBAJ_P0085285 Olfr716 protein_coding protein_coding MGP_CBAJ_T0008934.1 MGP_CBAJ_G0007180.1 mouse_genomes_project 7 142203452 142205764 - Gm26690 lincRNA lincRNA MGP_CBAJ_T0081056.1 MGP_CBAJ_G0031252.1 mouse_genomes_project 7 3165438 3166401 - MGP_CBAJ_P0081056 Vmn1r64 protein_coding protein_coding MGP_CBAJ_T0083028.1 MGP_CBAJ_G0031805.1 mouse_genomes_project 7 47193150 47198253 - MGP_CBAJ_P0083028 Cd33 protein_coding protein_coding MGP_CBAJ_T0083029.1 MGP_CBAJ_G0031805.1 mouse_genomes_project 7 47193681 47197830 - MGP_CBAJ_P0083029 Cd33 protein_coding protein_coding MGP_CBAJ_T0083030.1 MGP_CBAJ_G0031805.1 mouse_genomes_project 7 47194017 47198567 - MGP_CBAJ_P0083030 Cd33 protein_coding protein_coding MGP_CBAJ_T0083031.1 MGP_CBAJ_G0031805.1 mouse_genomes_project 7 47195507 47198239 - Cd33 protein_coding retained_intron MGP_CBAJ_T0083032.1 MGP_CBAJ_G0031805.1 mouse_genomes_project 7 47197194 47198106 - Cd33 protein_coding processed_transcript MGP_CBAJ_T0010723.1 MGP_CBAJ_G0008861.1 mouse_genomes_project 7 25075982 25076046 - Mir7047 miRNA miRNA MGP_CBAJ_T0008916.1 MGP_CBAJ_G0007171.1 mouse_genomes_project 7 140273039 140276265 - Gm45142 lincRNA lincRNA MGP_CBAJ_T0008917.1 MGP_CBAJ_G0007171.1 mouse_genomes_project 7 140275290 140276287 - Gm45142 lincRNA lincRNA MGP_CBAJ_T0086306.1 MGP_CBAJ_G0032703.1 mouse_genomes_project 7 141424410 141427039 - MGP_CBAJ_P0086306 Zfp768 protein_coding protein_coding MGP_CBAJ_T0086307.1 MGP_CBAJ_G0032703.1 mouse_genomes_project 7 141424410 141427205 - MGP_CBAJ_P0086307 Zfp768 protein_coding protein_coding MGP_CBAJ_T0102118.1 MGP_CBAJ_G0040147.1 mouse_genomes_project 7 35880102 35881079 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085268.1 MGP_CBAJ_G0032446.1 mouse_genomes_project 7 118497097 118500354 - MGP_CBAJ_P0085268 Olfr702 protein_coding protein_coding MGP_CBAJ_T0100757.1 MGP_CBAJ_G0039012.1 mouse_genomes_project 7 117029156 117029295 - Gm22504 snoRNA snoRNA MGP_CBAJ_T0015542.1 MGP_CBAJ_G0013654.1 mouse_genomes_project 7 36471497 36471913 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0086949.1 MGP_CBAJ_G0032846.1 mouse_genomes_project 7 155890532 155891612 - MGP_CBAJ_P0086949 Olfr530 protein_coding protein_coding MGP_CBAJ_T0086258.1 MGP_CBAJ_G0032693.1 mouse_genomes_project 7 141156697 141162321 - MGP_CBAJ_P0086258 Spn protein_coding nonsense_mediated_decay MGP_CBAJ_T0086259.1 MGP_CBAJ_G0032693.1 mouse_genomes_project 7 141157935 141161073 - MGP_CBAJ_P0086259 Spn protein_coding protein_coding MGP_CBAJ_T0086260.1 MGP_CBAJ_G0032693.1 mouse_genomes_project 7 141158167 141162330 - MGP_CBAJ_P0086260 Spn protein_coding protein_coding MGP_CBAJ_T0098454.1 MGP_CBAJ_G0036716.1 mouse_genomes_project 7 98492978 98526678 - sense_intronic sense_intronic MGP_CBAJ_T0005133.1 MGP_CBAJ_G0004362.1 mouse_genomes_project 7 49787748 49789786 - antisense antisense MGP_CBAJ_T0005134.1 MGP_CBAJ_G0004362.1 mouse_genomes_project 7 49789644 49790054 - antisense antisense MGP_CBAJ_T0084388.1 MGP_CBAJ_G0032123.1 mouse_genomes_project 7 92373484 92380856 - MGP_CBAJ_P0084388 Mesdc1 protein_coding protein_coding MGP_CBAJ_T0018069.1 MGP_CBAJ_G0015395.1 mouse_genomes_project 7 2297754 2304146 - processed_transcript processed_transcript MGP_CBAJ_T0018070.1 MGP_CBAJ_G0015395.1 mouse_genomes_project 7 2297755 2304061 - processed_transcript processed_transcript MGP_CBAJ_T0081919.1 MGP_CBAJ_G0031542.1 mouse_genomes_project 7 25823433 25825231 - MGP_CBAJ_P0081919 Bckdha protein_coding protein_coding MGP_CBAJ_T0081920.1 MGP_CBAJ_G0031542.1 mouse_genomes_project 7 25823433 25855602 - MGP_CBAJ_P0081920 Bckdha protein_coding protein_coding MGP_CBAJ_T0005208.1 MGP_CBAJ_G0004413.1 mouse_genomes_project 7 139385885 139387227 - Gm44876 antisense antisense MGP_CBAJ_T0081219.1 MGP_CBAJ_G0031326.1 mouse_genomes_project 7 11355091 11356042 + MGP_CBAJ_P0081219 Vmn1r88 protein_coding protein_coding MGP_CBAJ_T0085195.1 MGP_CBAJ_G0032427.1 mouse_genomes_project 7 117021020 117027235 - MGP_CBAJ_P0085195 Arfip2 protein_coding protein_coding MGP_CBAJ_T0085196.1 MGP_CBAJ_G0032427.1 mouse_genomes_project 7 117021024 117026733 - Arfip2 protein_coding retained_intron MGP_CBAJ_T0085197.1 MGP_CBAJ_G0032427.1 mouse_genomes_project 7 117022438 117027133 - MGP_CBAJ_P0085197 Arfip2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085198.1 MGP_CBAJ_G0032427.1 mouse_genomes_project 7 117022441 117024720 - Arfip2 protein_coding processed_transcript MGP_CBAJ_T0085199.1 MGP_CBAJ_G0032427.1 mouse_genomes_project 7 117022473 117027156 - MGP_CBAJ_P0085199 Arfip2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085200.1 MGP_CBAJ_G0032427.1 mouse_genomes_project 7 117022474 117027170 - MGP_CBAJ_P0085200 Arfip2 protein_coding protein_coding MGP_CBAJ_T0085201.1 MGP_CBAJ_G0032427.1 mouse_genomes_project 7 117023719 117024863 - Arfip2 protein_coding processed_transcript MGP_CBAJ_T0085202.1 MGP_CBAJ_G0032427.1 mouse_genomes_project 7 117023937 117024733 - Arfip2 protein_coding processed_transcript MGP_CBAJ_T0085203.1 MGP_CBAJ_G0032427.1 mouse_genomes_project 7 117024005 117027127 - MGP_CBAJ_P0085203 Arfip2 protein_coding protein_coding MGP_CBAJ_T0085204.1 MGP_CBAJ_G0032427.1 mouse_genomes_project 7 117024665 117027154 - MGP_CBAJ_P0085204 Arfip2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085205.1 MGP_CBAJ_G0032427.1 mouse_genomes_project 7 117025405 117027159 - Arfip2 protein_coding retained_intron MGP_CBAJ_T0097838.1 MGP_CBAJ_G0036111.1 mouse_genomes_project 7 120155683 120156629 - pseudogene pseudogene MGP_CBAJ_T0081081.1 MGP_CBAJ_G0031260.1 mouse_genomes_project 7 3695679 3711166 - MGP_CBAJ_P0081081 Zfp583 protein_coding protein_coding MGP_CBAJ_T0081082.1 MGP_CBAJ_G0031260.1 mouse_genomes_project 7 3696295 3710315 - MGP_CBAJ_P0081082 Zfp583 protein_coding protein_coding MGP_CBAJ_T0081083.1 MGP_CBAJ_G0031260.1 mouse_genomes_project 7 3696324 3709144 - MGP_CBAJ_P0081083 Zfp583 protein_coding protein_coding MGP_CBAJ_T0081084.1 MGP_CBAJ_G0031260.1 mouse_genomes_project 7 3697648 3711131 - Zfp583 protein_coding processed_transcript MGP_CBAJ_T0081085.1 MGP_CBAJ_G0031260.1 mouse_genomes_project 7 3703132 3711085 - Zfp583 protein_coding processed_transcript MGP_CBAJ_T0081086.1 MGP_CBAJ_G0031260.1 mouse_genomes_project 7 3703586 3711159 - MGP_CBAJ_P0081086 Zfp583 protein_coding protein_coding MGP_CBAJ_T0083800.1 MGP_CBAJ_G0032006.1 mouse_genomes_project 7 70511647 70539875 - MGP_CBAJ_P0083800 Fan1 protein_coding protein_coding MGP_CBAJ_T0083801.1 MGP_CBAJ_G0032006.1 mouse_genomes_project 7 70527289 70539168 - Fan1 protein_coding retained_intron MGP_CBAJ_T0083802.1 MGP_CBAJ_G0032006.1 mouse_genomes_project 7 70535950 70539890 - Fan1 protein_coding retained_intron MGP_CBAJ_T0083803.1 MGP_CBAJ_G0032006.1 mouse_genomes_project 7 70536709 70539836 - Fan1 protein_coding retained_intron MGP_CBAJ_T0085354.1 MGP_CBAJ_G0032512.1 mouse_genomes_project 7 121408111 121458905 - MGP_CBAJ_P0085354 Trim66 protein_coding protein_coding MGP_CBAJ_T0085355.1 MGP_CBAJ_G0032512.1 mouse_genomes_project 7 121412596 121481109 - MGP_CBAJ_P0085355 Trim66 protein_coding protein_coding MGP_CBAJ_T0085356.1 MGP_CBAJ_G0032512.1 mouse_genomes_project 7 121412596 121481109 - MGP_CBAJ_P0085356 Trim66 protein_coding protein_coding MGP_CBAJ_T0085357.1 MGP_CBAJ_G0032512.1 mouse_genomes_project 7 121428652 121434073 - Trim66 protein_coding processed_transcript MGP_CBAJ_T0010725.1 MGP_CBAJ_G0008863.1 mouse_genomes_project 7 25354147 25354205 - Mir7048 miRNA miRNA MGP_CBAJ_T0086212.1 MGP_CBAJ_G0032682.1 mouse_genomes_project 7 140978009 140982073 + MGP_CBAJ_P0086212 Cdipt protein_coding nonsense_mediated_decay MGP_CBAJ_T0086213.1 MGP_CBAJ_G0032682.1 mouse_genomes_project 7 140978031 140982075 + MGP_CBAJ_P0086213 Cdipt protein_coding nonsense_mediated_decay MGP_CBAJ_T0086214.1 MGP_CBAJ_G0032682.1 mouse_genomes_project 7 140978161 140981225 + MGP_CBAJ_P0086214 Cdipt protein_coding protein_coding MGP_CBAJ_T0086215.1 MGP_CBAJ_G0032682.1 mouse_genomes_project 7 140978303 140981611 + MGP_CBAJ_P0086215 Cdipt protein_coding protein_coding MGP_CBAJ_T0086216.1 MGP_CBAJ_G0032682.1 mouse_genomes_project 7 140978337 140982079 + MGP_CBAJ_P0086216 Cdipt protein_coding protein_coding MGP_CBAJ_T0086217.1 MGP_CBAJ_G0032682.1 mouse_genomes_project 7 140979806 140981049 + Cdipt protein_coding retained_intron MGP_CBAJ_T0082399.1 MGP_CBAJ_G0031665.1 mouse_genomes_project 7 31375423 31385261 - MGP_CBAJ_P0082399 Zfp14 protein_coding protein_coding MGP_CBAJ_T0083161.1 MGP_CBAJ_G0031840.1 mouse_genomes_project 7 48525183 48529254 - MGP_CBAJ_P0083161 Nr1h2 protein_coding protein_coding MGP_CBAJ_T0083162.1 MGP_CBAJ_G0031840.1 mouse_genomes_project 7 48525183 48529517 - MGP_CBAJ_P0083162 Nr1h2 protein_coding protein_coding MGP_CBAJ_T0083163.1 MGP_CBAJ_G0031840.1 mouse_genomes_project 7 48525184 48529516 - MGP_CBAJ_P0083163 Nr1h2 protein_coding protein_coding MGP_CBAJ_T0083164.1 MGP_CBAJ_G0031840.1 mouse_genomes_project 7 48525202 48529491 - MGP_CBAJ_P0083164 Nr1h2 protein_coding protein_coding MGP_CBAJ_T0083165.1 MGP_CBAJ_G0031840.1 mouse_genomes_project 7 48525219 48529491 - MGP_CBAJ_P0083165 Nr1h2 protein_coding protein_coding MGP_CBAJ_T0083166.1 MGP_CBAJ_G0031840.1 mouse_genomes_project 7 48525869 48529479 - Nr1h2 protein_coding retained_intron MGP_CBAJ_T0083167.1 MGP_CBAJ_G0031840.1 mouse_genomes_project 7 48525941 48527191 - Nr1h2 protein_coding retained_intron MGP_CBAJ_T0083168.1 MGP_CBAJ_G0031840.1 mouse_genomes_project 7 48526624 48529519 - Nr1h2 protein_coding retained_intron MGP_CBAJ_T0083169.1 MGP_CBAJ_G0031840.1 mouse_genomes_project 7 48526707 48527439 - Nr1h2 protein_coding retained_intron MGP_CBAJ_T0083170.1 MGP_CBAJ_G0031840.1 mouse_genomes_project 7 48527776 48528155 - Nr1h2 protein_coding retained_intron MGP_CBAJ_T0083171.1 MGP_CBAJ_G0031840.1 mouse_genomes_project 7 48528061 48529491 - Nr1h2 protein_coding retained_intron MGP_CBAJ_T0083172.1 MGP_CBAJ_G0031840.1 mouse_genomes_project 7 48528160 48528780 - Nr1h2 protein_coding retained_intron MGP_CBAJ_T0083173.1 MGP_CBAJ_G0031840.1 mouse_genomes_project 7 48528201 48529467 - Nr1h2 protein_coding retained_intron MGP_CBAJ_T0084705.1 MGP_CBAJ_G0032221.1 mouse_genomes_project 7 110045957 110105624 - MGP_CBAJ_P0084705 Slco2b1 protein_coding protein_coding MGP_CBAJ_T0084706.1 MGP_CBAJ_G0032221.1 mouse_genomes_project 7 110046543 110087198 - MGP_CBAJ_P0084706 Slco2b1 protein_coding protein_coding MGP_CBAJ_T0084707.1 MGP_CBAJ_G0032221.1 mouse_genomes_project 7 110046543 110101414 - MGP_CBAJ_P0084707 Slco2b1 protein_coding protein_coding MGP_CBAJ_T0084708.1 MGP_CBAJ_G0032221.1 mouse_genomes_project 7 110048011 110053073 - MGP_CBAJ_P0084708 Slco2b1 protein_coding protein_coding MGP_CBAJ_T0084709.1 MGP_CBAJ_G0032221.1 mouse_genomes_project 7 110080541 110087017 - MGP_CBAJ_P0084709 Slco2b1 protein_coding protein_coding MGP_CBAJ_T0084710.1 MGP_CBAJ_G0032221.1 mouse_genomes_project 7 110082141 110086971 - MGP_CBAJ_P0084710 Slco2b1 protein_coding protein_coding MGP_CBAJ_T0102139.1 MGP_CBAJ_G0040168.1 mouse_genomes_project 7 47937490 47939666 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0005166.1 MGP_CBAJ_G0004386.1 mouse_genomes_project 7 92130840 92132229 + 2310044K18Rik antisense antisense MGP_CBAJ_T0081167.1 MGP_CBAJ_G0031312.1 mouse_genomes_project 7 11033130 11045927 + MGP_CBAJ_P0081167 Zscan22 protein_coding protein_coding MGP_CBAJ_T0081168.1 MGP_CBAJ_G0031312.1 mouse_genomes_project 7 11033151 11046771 + MGP_CBAJ_P0081168 Zscan22 protein_coding protein_coding MGP_CBAJ_T0081169.1 MGP_CBAJ_G0031312.1 mouse_genomes_project 7 11033156 11045225 + MGP_CBAJ_P0081169 Zscan22 protein_coding protein_coding MGP_CBAJ_T0081170.1 MGP_CBAJ_G0031312.1 mouse_genomes_project 7 11033182 11045930 + MGP_CBAJ_P0081170 Zscan22 protein_coding protein_coding MGP_CBAJ_T0087452.1 MGP_CBAJ_G0032959.1 mouse_genomes_project 7 160649992 160655751 - MGP_CBAJ_P0087452 Fadd protein_coding protein_coding MGP_CBAJ_T0082132.1 MGP_CBAJ_G0031594.1 mouse_genomes_project 7 28622475 28635306 + MGP_CBAJ_P0082132 Zfp626 protein_coding protein_coding MGP_CBAJ_T0082133.1 MGP_CBAJ_G0031594.1 mouse_genomes_project 7 28622537 28630421 + MGP_CBAJ_P0082133 Zfp626 protein_coding protein_coding MGP_CBAJ_T0081937.1 MGP_CBAJ_G0031546.1 mouse_genomes_project 7 25886443 25912710 + MGP_CBAJ_P0081937 Tgfb1 protein_coding protein_coding MGP_CBAJ_T0081938.1 MGP_CBAJ_G0031546.1 mouse_genomes_project 7 25887589 25888166 + Tgfb1 protein_coding processed_transcript MGP_CBAJ_T0081939.1 MGP_CBAJ_G0031546.1 mouse_genomes_project 7 25888331 25890904 + Tgfb1 protein_coding retained_intron MGP_CBAJ_T0081940.1 MGP_CBAJ_G0031546.1 mouse_genomes_project 7 25888368 25899498 + MGP_CBAJ_P0081940 Tgfb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081941.1 MGP_CBAJ_G0031546.1 mouse_genomes_project 7 25891871 25899459 + Tgfb1 protein_coding retained_intron MGP_CBAJ_T0084464.1 MGP_CBAJ_G0032163.1 mouse_genomes_project 7 98671150 98680950 - MGP_CBAJ_P0084464 Prss23 protein_coding protein_coding MGP_CBAJ_T0015605.1 MGP_CBAJ_G0013717.1 mouse_genomes_project 7 75852931 75853934 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0081921.1 MGP_CBAJ_G0031543.1 mouse_genomes_project 7 25855784 25864653 + MGP_CBAJ_P0081921 Exosc5 protein_coding protein_coding MGP_CBAJ_T0081922.1 MGP_CBAJ_G0031543.1 mouse_genomes_project 7 25855811 25867986 + MGP_CBAJ_P0081922 Exosc5 protein_coding protein_coding MGP_CBAJ_T0081923.1 MGP_CBAJ_G0031543.1 mouse_genomes_project 7 25855832 25864653 + Exosc5 protein_coding retained_intron MGP_CBAJ_T0081924.1 MGP_CBAJ_G0031543.1 mouse_genomes_project 7 25855832 25862927 + MGP_CBAJ_P0081924 Exosc5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081925.1 MGP_CBAJ_G0031543.1 mouse_genomes_project 7 25855838 25861022 + MGP_CBAJ_P0081925 Exosc5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081926.1 MGP_CBAJ_G0031543.1 mouse_genomes_project 7 25861007 25863395 + Exosc5 protein_coding retained_intron MGP_CBAJ_T0002263.1 MGP_CBAJ_G0002177.1 mouse_genomes_project 7 136213556 136215184 - TEC TEC MGP_CBAJ_T0010709.1 MGP_CBAJ_G0008847.1 mouse_genomes_project 7 1593797 1593891 - Gm24605 miRNA miRNA MGP_CBAJ_T0008706.1 MGP_CBAJ_G0007022.1 mouse_genomes_project 7 18915329 18925785 - Gm26852 lincRNA lincRNA MGP_CBAJ_T0085438.1 MGP_CBAJ_G0032532.1 mouse_genomes_project 7 122974757 122989564 - MGP_CBAJ_P0085438 Lyve1 protein_coding protein_coding MGP_CBAJ_T0015488.1 MGP_CBAJ_G0013600.1 mouse_genomes_project 7 12562244 12562698 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005186.1 MGP_CBAJ_G0004398.1 mouse_genomes_project 7 115479537 115488864 + Gm15133 antisense antisense MGP_CBAJ_T0005187.1 MGP_CBAJ_G0004398.1 mouse_genomes_project 7 115479538 115489035 + Gm15133 antisense antisense MGP_CBAJ_T0081643.1 MGP_CBAJ_G0031461.1 mouse_genomes_project 7 19386751 19398230 - Cblc protein_coding processed_transcript MGP_CBAJ_T0081644.1 MGP_CBAJ_G0031461.1 mouse_genomes_project 7 19387489 19393160 - Cblc protein_coding processed_transcript MGP_CBAJ_T0081645.1 MGP_CBAJ_G0031461.1 mouse_genomes_project 7 19387582 19411119 - MGP_CBAJ_P0081645 Cblc protein_coding protein_coding MGP_CBAJ_T0081646.1 MGP_CBAJ_G0031461.1 mouse_genomes_project 7 19387582 19411135 - MGP_CBAJ_P0081646 Cblc protein_coding protein_coding MGP_CBAJ_T0081647.1 MGP_CBAJ_G0031461.1 mouse_genomes_project 7 19393914 19403978 - Cblc protein_coding processed_transcript MGP_CBAJ_T0081648.1 MGP_CBAJ_G0031461.1 mouse_genomes_project 7 19399598 19404947 - Cblc protein_coding processed_transcript MGP_CBAJ_T0081649.1 MGP_CBAJ_G0031461.1 mouse_genomes_project 7 19403592 19411131 - Cblc protein_coding retained_intron MGP_CBAJ_T0086707.1 MGP_CBAJ_G0032784.1 mouse_genomes_project 7 147371082 147395521 + Lhpp protein_coding processed_transcript MGP_CBAJ_T0086708.1 MGP_CBAJ_G0032784.1 mouse_genomes_project 7 147371083 147470807 + MGP_CBAJ_P0086708 Lhpp protein_coding protein_coding MGP_CBAJ_T0086709.1 MGP_CBAJ_G0032784.1 mouse_genomes_project 7 147371111 147435530 + Lhpp protein_coding processed_transcript MGP_CBAJ_T0086710.1 MGP_CBAJ_G0032784.1 mouse_genomes_project 7 147371152 147470164 + Lhpp protein_coding processed_transcript MGP_CBAJ_T0086711.1 MGP_CBAJ_G0032784.1 mouse_genomes_project 7 147395265 147406465 + Lhpp protein_coding retained_intron MGP_CBAJ_T0010735.1 MGP_CBAJ_G0008873.1 mouse_genomes_project 7 31969336 31969413 + Gm38670 miRNA miRNA MGP_CBAJ_T0083152.1 MGP_CBAJ_G0031839.1 mouse_genomes_project 7 48508764 48524631 - MGP_CBAJ_P0083152 Pold1 protein_coding protein_coding MGP_CBAJ_T0083153.1 MGP_CBAJ_G0031839.1 mouse_genomes_project 7 48508767 48509936 - Pold1 protein_coding retained_intron MGP_CBAJ_T0083154.1 MGP_CBAJ_G0031839.1 mouse_genomes_project 7 48508769 48524633 - Pold1 protein_coding retained_intron MGP_CBAJ_T0083155.1 MGP_CBAJ_G0031839.1 mouse_genomes_project 7 48508772 48511103 - Pold1 protein_coding retained_intron MGP_CBAJ_T0083156.1 MGP_CBAJ_G0031839.1 mouse_genomes_project 7 48508804 48524622 - MGP_CBAJ_P0083156 Pold1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083157.1 MGP_CBAJ_G0031839.1 mouse_genomes_project 7 48509298 48510207 - Pold1 protein_coding retained_intron MGP_CBAJ_T0083158.1 MGP_CBAJ_G0031839.1 mouse_genomes_project 7 48509913 48511970 - Pold1 protein_coding retained_intron MGP_CBAJ_T0083159.1 MGP_CBAJ_G0031839.1 mouse_genomes_project 7 48513531 48514433 - Pold1 protein_coding retained_intron MGP_CBAJ_T0083160.1 MGP_CBAJ_G0031839.1 mouse_genomes_project 7 48518107 48524517 - MGP_CBAJ_P0083160 Pold1 protein_coding protein_coding MGP_CBAJ_T0102103.1 MGP_CBAJ_G0031519.1 mouse_genomes_project 7 25002013 25002599 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0002163.1 MGP_CBAJ_G0002078.1 mouse_genomes_project 7 24652768 24653006 + TEC TEC MGP_CBAJ_T0081178.1 MGP_CBAJ_G0031314.1 mouse_genomes_project 7 11063723 11067380 + MGP_CBAJ_P0081178 Rnf225 protein_coding protein_coding MGP_CBAJ_T0083462.1 MGP_CBAJ_G0031919.1 mouse_genomes_project 7 50011551 50018215 - MGP_CBAJ_P0083462 Cyth2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083463.1 MGP_CBAJ_G0031919.1 mouse_genomes_project 7 50011561 50018195 - MGP_CBAJ_P0083463 Cyth2 protein_coding protein_coding MGP_CBAJ_T0083464.1 MGP_CBAJ_G0031919.1 mouse_genomes_project 7 50011673 50018029 - MGP_CBAJ_P0083464 Cyth2 protein_coding protein_coding MGP_CBAJ_T0083465.1 MGP_CBAJ_G0031919.1 mouse_genomes_project 7 50013966 50018185 - Cyth2 protein_coding processed_transcript MGP_CBAJ_T0083466.1 MGP_CBAJ_G0031919.1 mouse_genomes_project 7 50014767 50018494 - MGP_CBAJ_P0083466 Cyth2 protein_coding protein_coding MGP_CBAJ_T0083467.1 MGP_CBAJ_G0031919.1 mouse_genomes_project 7 50015436 50018174 - Cyth2 protein_coding processed_transcript MGP_CBAJ_T0083811.1 MGP_CBAJ_G0032009.1 mouse_genomes_project 7 70676342 70922442 + MGP_CBAJ_P0083811 Apba2 protein_coding protein_coding MGP_CBAJ_T0083812.1 MGP_CBAJ_G0032009.1 mouse_genomes_project 7 70676585 70863959 + MGP_CBAJ_P0083812 Apba2 protein_coding protein_coding MGP_CBAJ_T0083813.1 MGP_CBAJ_G0032009.1 mouse_genomes_project 7 70676774 70864023 + MGP_CBAJ_P0083813 Apba2 protein_coding protein_coding MGP_CBAJ_T0083814.1 MGP_CBAJ_G0032009.1 mouse_genomes_project 7 70810266 70922422 + MGP_CBAJ_P0083814 Apba2 protein_coding protein_coding MGP_CBAJ_T0083815.1 MGP_CBAJ_G0032009.1 mouse_genomes_project 7 70897995 70913106 + Apba2 protein_coding processed_transcript MGP_CBAJ_T0083816.1 MGP_CBAJ_G0032009.1 mouse_genomes_project 7 70912426 70921942 + Apba2 protein_coding processed_transcript MGP_CBAJ_T0083817.1 MGP_CBAJ_G0032009.1 mouse_genomes_project 7 70913170 70921973 + MGP_CBAJ_P0083817 Apba2 protein_coding protein_coding MGP_CBAJ_T0085644.1 MGP_CBAJ_G0032572.1 mouse_genomes_project 7 131594360 131682935 + MGP_CBAJ_P0085644 Tmc5 protein_coding protein_coding MGP_CBAJ_T0085645.1 MGP_CBAJ_G0032572.1 mouse_genomes_project 7 131594360 131682936 + MGP_CBAJ_P0085645 Tmc5 protein_coding protein_coding MGP_CBAJ_T0085646.1 MGP_CBAJ_G0032572.1 mouse_genomes_project 7 131599468 131682936 + MGP_CBAJ_P0085646 Tmc5 protein_coding protein_coding MGP_CBAJ_T0085647.1 MGP_CBAJ_G0032572.1 mouse_genomes_project 7 131601308 131682510 + MGP_CBAJ_P0085647 Tmc5 protein_coding unknown_likely_coding MGP_CBAJ_T0085648.1 MGP_CBAJ_G0032572.1 mouse_genomes_project 7 131632348 131682936 + MGP_CBAJ_P0085648 Tmc5 protein_coding protein_coding MGP_CBAJ_T0086056.1 MGP_CBAJ_G0032660.1 mouse_genomes_project 7 140570389 140572817 - MGP_CBAJ_P0086056 Nupr1 protein_coding protein_coding MGP_CBAJ_T0086057.1 MGP_CBAJ_G0032660.1 mouse_genomes_project 7 140570392 140574151 - Nupr1 protein_coding retained_intron MGP_CBAJ_T0086058.1 MGP_CBAJ_G0032660.1 mouse_genomes_project 7 140570418 140572485 - MGP_CBAJ_P0086058 Nupr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086059.1 MGP_CBAJ_G0032660.1 mouse_genomes_project 7 140570582 140572616 - MGP_CBAJ_P0086059 Nupr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086060.1 MGP_CBAJ_G0032660.1 mouse_genomes_project 7 140572088 140580339 - Nupr1 protein_coding processed_transcript MGP_CBAJ_T0086061.1 MGP_CBAJ_G0032660.1 mouse_genomes_project 7 140572088 140573157 - Nupr1 protein_coding processed_transcript MGP_CBAJ_T0086960.1 MGP_CBAJ_G0032857.1 mouse_genomes_project 7 156290868 156293467 + MGP_CBAJ_P0086960 Olfr541 protein_coding protein_coding MGP_CBAJ_T0005188.1 MGP_CBAJ_G0004399.1 mouse_genomes_project 7 122730379 122743444 - Gm28863 antisense antisense MGP_CBAJ_T0085298.1 MGP_CBAJ_G0032470.1 mouse_genomes_project 7 119484551 119494129 - MGP_CBAJ_P0085298 Cyb5r2 protein_coding protein_coding MGP_CBAJ_T0085299.1 MGP_CBAJ_G0032470.1 mouse_genomes_project 7 119486320 119493359 - MGP_CBAJ_P0085299 Cyb5r2 protein_coding unknown_likely_coding MGP_CBAJ_T0084393.1 MGP_CBAJ_G0032125.1 mouse_genomes_project 7 92435347 92606522 - MGP_CBAJ_P0084393 Cemip protein_coding protein_coding MGP_CBAJ_T0084394.1 MGP_CBAJ_G0032125.1 mouse_genomes_project 7 92437279 92446830 - Cemip protein_coding retained_intron MGP_CBAJ_T0084395.1 MGP_CBAJ_G0032125.1 mouse_genomes_project 7 92449016 92606714 - Cemip protein_coding retained_intron MGP_CBAJ_T0084396.1 MGP_CBAJ_G0032125.1 mouse_genomes_project 7 92452952 92485088 - Cemip protein_coding retained_intron MGP_CBAJ_T0084397.1 MGP_CBAJ_G0032125.1 mouse_genomes_project 7 92463241 92606714 - Cemip protein_coding retained_intron MGP_CBAJ_T0082395.1 MGP_CBAJ_G0031664.1 mouse_genomes_project 7 31311040 31362786 + MGP_CBAJ_P0082395 Zfp568 protein_coding protein_coding MGP_CBAJ_T0082396.1 MGP_CBAJ_G0031664.1 mouse_genomes_project 7 31312384 31365957 + MGP_CBAJ_P0082396 Zfp568 protein_coding protein_coding MGP_CBAJ_T0082397.1 MGP_CBAJ_G0031664.1 mouse_genomes_project 7 31314858 31361322 + MGP_CBAJ_P0082397 Zfp568 protein_coding protein_coding MGP_CBAJ_T0082398.1 MGP_CBAJ_G0031664.1 mouse_genomes_project 7 31314858 31361322 + MGP_CBAJ_P0082398 Zfp568 protein_coding protein_coding MGP_CBAJ_T0015482.1 MGP_CBAJ_G0013594.1 mouse_genomes_project 7 12113257 12113471 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010802.1 MGP_CBAJ_G0008940.1 mouse_genomes_project 7 142824544 142824669 - Gm24365 miRNA miRNA MGP_CBAJ_T0002189.1 MGP_CBAJ_G0002104.1 mouse_genomes_project 7 50630254 50630770 + TEC TEC MGP_CBAJ_T0084794.1 MGP_CBAJ_G0032244.1 mouse_genomes_project 7 111411047 111430963 - MGP_CBAJ_P0084794 Relt protein_coding protein_coding MGP_CBAJ_T0084795.1 MGP_CBAJ_G0032244.1 mouse_genomes_project 7 111411728 111430923 - MGP_CBAJ_P0084795 Relt protein_coding nonsense_mediated_decay MGP_CBAJ_T0084796.1 MGP_CBAJ_G0032244.1 mouse_genomes_project 7 111418596 111422926 - MGP_CBAJ_P0084796 Relt protein_coding protein_coding MGP_CBAJ_T0084797.1 MGP_CBAJ_G0032244.1 mouse_genomes_project 7 111418596 111423800 - MGP_CBAJ_P0084797 Relt protein_coding protein_coding MGP_CBAJ_T0084798.1 MGP_CBAJ_G0032244.1 mouse_genomes_project 7 111418606 111430675 - MGP_CBAJ_P0084798 Relt protein_coding protein_coding MGP_CBAJ_T0084799.1 MGP_CBAJ_G0032244.1 mouse_genomes_project 7 111420553 111430915 - MGP_CBAJ_P0084799 Relt protein_coding protein_coding MGP_CBAJ_T0084741.1 MGP_CBAJ_G0032234.1 mouse_genomes_project 7 110801632 110846120 - MGP_CBAJ_P0084741 Ppme1 protein_coding unknown_likely_coding MGP_CBAJ_T0084742.1 MGP_CBAJ_G0032234.1 mouse_genomes_project 7 110801638 110846027 - MGP_CBAJ_P0084742 Ppme1 protein_coding protein_coding MGP_CBAJ_T0015460.1 MGP_CBAJ_G0013572.1 mouse_genomes_project 7 1508107 1508285 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0082581.1 MGP_CBAJ_G0031705.1 mouse_genomes_project 7 32071339 32080663 - MGP_CBAJ_P0082581 Rbm42 protein_coding protein_coding MGP_CBAJ_T0082582.1 MGP_CBAJ_G0031705.1 mouse_genomes_project 7 32071344 32080490 - MGP_CBAJ_P0082582 Rbm42 protein_coding protein_coding MGP_CBAJ_T0082583.1 MGP_CBAJ_G0031705.1 mouse_genomes_project 7 32074445 32076333 - Rbm42 protein_coding retained_intron MGP_CBAJ_T0081143.1 MGP_CBAJ_G0031301.1 mouse_genomes_project 7 10506931 10514530 - MGP_CBAJ_P0081143 Zfp551 protein_coding protein_coding MGP_CBAJ_T0081144.1 MGP_CBAJ_G0031301.1 mouse_genomes_project 7 10508727 10514267 - MGP_CBAJ_P0081144 Zfp551 protein_coding protein_coding MGP_CBAJ_T0081145.1 MGP_CBAJ_G0031301.1 mouse_genomes_project 7 10508880 10514218 - Zfp551 protein_coding processed_transcript MGP_CBAJ_T0085036.1 MGP_CBAJ_G0032331.1 mouse_genomes_project 7 114658237 114659194 + MGP_CBAJ_P0085036 Olfr618 protein_coding protein_coding MGP_CBAJ_T0082078.1 MGP_CBAJ_G0031582.1 mouse_genomes_project 7 28153449 28171618 + MGP_CBAJ_P0082078 Blvrb protein_coding protein_coding MGP_CBAJ_T0082079.1 MGP_CBAJ_G0031582.1 mouse_genomes_project 7 28153471 28165205 + MGP_CBAJ_P0082079 Blvrb protein_coding protein_coding MGP_CBAJ_T0082080.1 MGP_CBAJ_G0031582.1 mouse_genomes_project 7 28153535 28171497 + MGP_CBAJ_P0082080 Blvrb protein_coding protein_coding MGP_CBAJ_T0082081.1 MGP_CBAJ_G0031582.1 mouse_genomes_project 7 28157884 28168136 + Blvrb protein_coding processed_transcript MGP_CBAJ_T0082278.1 MGP_CBAJ_G0031637.1 mouse_genomes_project 7 29973250 30077227 - MGP_CBAJ_P0082278 Actn4 protein_coding protein_coding MGP_CBAJ_T0082279.1 MGP_CBAJ_G0031637.1 mouse_genomes_project 7 29973251 30077070 - MGP_CBAJ_P0082279 Actn4 protein_coding unknown_likely_coding MGP_CBAJ_T0082280.1 MGP_CBAJ_G0031637.1 mouse_genomes_project 7 29973660 29987443 - Actn4 protein_coding processed_transcript MGP_CBAJ_T0082281.1 MGP_CBAJ_G0031637.1 mouse_genomes_project 7 29974267 29974889 - Actn4 protein_coding retained_intron MGP_CBAJ_T0082282.1 MGP_CBAJ_G0031637.1 mouse_genomes_project 7 29975683 29977063 - Actn4 protein_coding retained_intron MGP_CBAJ_T0082283.1 MGP_CBAJ_G0031637.1 mouse_genomes_project 7 29978651 30077110 - MGP_CBAJ_P0082283 Actn4 protein_coding protein_coding MGP_CBAJ_T0082284.1 MGP_CBAJ_G0031637.1 mouse_genomes_project 7 29981966 29987735 - Actn4 protein_coding processed_transcript MGP_CBAJ_T0082285.1 MGP_CBAJ_G0031637.1 mouse_genomes_project 7 29987071 29999267 - MGP_CBAJ_P0082285 Actn4 protein_coding protein_coding MGP_CBAJ_T0082286.1 MGP_CBAJ_G0031637.1 mouse_genomes_project 7 29993426 30044697 - MGP_CBAJ_P0082286 Actn4 protein_coding protein_coding MGP_CBAJ_T0086453.1 MGP_CBAJ_G0032731.1 mouse_genomes_project 7 142087835 142092964 - MGP_CBAJ_P0086453 Prss53 protein_coding protein_coding MGP_CBAJ_T0086454.1 MGP_CBAJ_G0032731.1 mouse_genomes_project 7 142088087 142092961 - MGP_CBAJ_P0086454 Prss53 protein_coding protein_coding MGP_CBAJ_T0015709.1 MGP_CBAJ_G0013821.1 mouse_genomes_project 7 158130432 158130885 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015495.1 MGP_CBAJ_G0013607.1 mouse_genomes_project 7 15596785 15597193 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0102221.1 MGP_CBAJ_G0040250.1 mouse_genomes_project 7 117233026 118119513 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015484.1 MGP_CBAJ_G0013596.1 mouse_genomes_project 7 12246159 12260707 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0087343.1 MGP_CBAJ_G0032937.1 mouse_genomes_project 7 158909461 158923803 + MGP_CBAJ_P0087343 Tspan32 protein_coding protein_coding MGP_CBAJ_T0087344.1 MGP_CBAJ_G0032937.1 mouse_genomes_project 7 158909475 158911898 + Tspan32 protein_coding retained_intron MGP_CBAJ_T0087345.1 MGP_CBAJ_G0032937.1 mouse_genomes_project 7 158910053 158923961 + MGP_CBAJ_P0087345 Tspan32 protein_coding protein_coding MGP_CBAJ_T0087346.1 MGP_CBAJ_G0032937.1 mouse_genomes_project 7 158910078 158923800 + MGP_CBAJ_P0087346 Tspan32 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087347.1 MGP_CBAJ_G0032937.1 mouse_genomes_project 7 158910086 158923803 + MGP_CBAJ_P0087347 Tspan32 protein_coding protein_coding MGP_CBAJ_T0087348.1 MGP_CBAJ_G0032937.1 mouse_genomes_project 7 158910100 158923803 + MGP_CBAJ_P0087348 Tspan32 protein_coding protein_coding MGP_CBAJ_T0087349.1 MGP_CBAJ_G0032937.1 mouse_genomes_project 7 158910114 158923803 + MGP_CBAJ_P0087349 Tspan32 protein_coding protein_coding MGP_CBAJ_T0087350.1 MGP_CBAJ_G0032937.1 mouse_genomes_project 7 158910114 158923803 + MGP_CBAJ_P0087350 Tspan32 protein_coding protein_coding MGP_CBAJ_T0087351.1 MGP_CBAJ_G0032937.1 mouse_genomes_project 7 158910343 158921990 + MGP_CBAJ_P0087351 Tspan32 protein_coding protein_coding MGP_CBAJ_T0087352.1 MGP_CBAJ_G0032937.1 mouse_genomes_project 7 158921725 158923220 + Tspan32 protein_coding retained_intron MGP_CBAJ_T0084714.1 MGP_CBAJ_G0032225.1 mouse_genomes_project 7 110263395 110292169 - MGP_CBAJ_P0084714 Spcs2 protein_coding protein_coding MGP_CBAJ_T0083761.1 MGP_CBAJ_G0031999.1 mouse_genomes_project 7 68443762 68448614 - MGP_CBAJ_P0083761 Peg12 protein_coding protein_coding MGP_CBAJ_T0081113.1 MGP_CBAJ_G0031276.1 mouse_genomes_project 7 4623793 4631016 - MGP_CBAJ_P0081113 Zfp954 protein_coding protein_coding MGP_CBAJ_T0102051.1 MGP_CBAJ_G0040081.1 mouse_genomes_project 7 8076823 8077719 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081393.1 MGP_CBAJ_G0031380.1 mouse_genomes_project 7 15876414 15895631 + MGP_CBAJ_P0081393 Dact3 protein_coding protein_coding MGP_CBAJ_T0015612.1 MGP_CBAJ_G0013724.1 mouse_genomes_project 7 82036888 82037119 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0087399.1 MGP_CBAJ_G0032949.1 mouse_genomes_project 7 159632788 159647785 - MGP_CBAJ_P0087399 protein_coding protein_coding MGP_CBAJ_T0082928.1 MGP_CBAJ_G0031773.1 mouse_genomes_project 7 40822395 40839473 + MGP_CBAJ_P0082928 1600014C10Rik protein_coding protein_coding MGP_CBAJ_T0082929.1 MGP_CBAJ_G0031773.1 mouse_genomes_project 7 40822418 40823078 + 1600014C10Rik protein_coding processed_transcript MGP_CBAJ_T0082930.1 MGP_CBAJ_G0031773.1 mouse_genomes_project 7 40822439 40838499 + MGP_CBAJ_P0082930 1600014C10Rik protein_coding protein_coding MGP_CBAJ_T0082931.1 MGP_CBAJ_G0031773.1 mouse_genomes_project 7 40822831 40839473 + MGP_CBAJ_P0082931 1600014C10Rik protein_coding protein_coding MGP_CBAJ_T0082932.1 MGP_CBAJ_G0031773.1 mouse_genomes_project 7 40823026 40828110 + MGP_CBAJ_P0082932 1600014C10Rik protein_coding protein_coding MGP_CBAJ_T0082933.1 MGP_CBAJ_G0031773.1 mouse_genomes_project 7 40823076 40836881 + MGP_CBAJ_P0082933 1600014C10Rik protein_coding protein_coding MGP_CBAJ_T0082934.1 MGP_CBAJ_G0031773.1 mouse_genomes_project 7 40825442 40837173 + MGP_CBAJ_P0082934 1600014C10Rik protein_coding protein_coding MGP_CBAJ_T0081096.1 MGP_CBAJ_G0031267.1 mouse_genomes_project 7 3883258 3884299 + MGP_CBAJ_P0081096 Olfr1346 protein_coding protein_coding MGP_CBAJ_T0087357.1 MGP_CBAJ_G0032939.1 mouse_genomes_project 7 158973474 158978883 - MGP_CBAJ_P0087357 Trpm5 protein_coding protein_coding MGP_CBAJ_T0087364.1 MGP_CBAJ_G0032939.1 mouse_genomes_project 7 158975412 158978359 - MGP_CBAJ_P0087364 Trpm5 protein_coding protein_coding MGP_CBAJ_T0087365.1 MGP_CBAJ_G0032939.1 mouse_genomes_project 7 158975538 158979175 - Trpm5 protein_coding retained_intron MGP_CBAJ_T0087366.1 MGP_CBAJ_G0032939.1 mouse_genomes_project 7 158975850 158991536 - Trpm5 protein_coding retained_intron MGP_CBAJ_T0087367.1 MGP_CBAJ_G0032939.1 mouse_genomes_project 7 158976110 158998964 - MGP_CBAJ_P0087367 Trpm5 protein_coding protein_coding MGP_CBAJ_T0087368.1 MGP_CBAJ_G0032939.1 mouse_genomes_project 7 158976499 158991451 - Trpm5 protein_coding retained_intron MGP_CBAJ_T0087369.1 MGP_CBAJ_G0032939.1 mouse_genomes_project 7 158976663 158998928 - MGP_CBAJ_P0087369 Trpm5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087370.1 MGP_CBAJ_G0032939.1 mouse_genomes_project 7 158985037 158986244 - Trpm5 protein_coding retained_intron MGP_CBAJ_T0086966.1 MGP_CBAJ_G0032861.1 mouse_genomes_project 7 156439723 156442593 + MGP_CBAJ_P0086966 Urah protein_coding protein_coding MGP_CBAJ_T0086967.1 MGP_CBAJ_G0032861.1 mouse_genomes_project 7 156439984 156442672 + MGP_CBAJ_P0086967 Urah protein_coding protein_coding MGP_CBAJ_T0086968.1 MGP_CBAJ_G0032861.1 mouse_genomes_project 7 156440002 156442677 + MGP_CBAJ_P0086968 Urah protein_coding protein_coding MGP_CBAJ_T0086969.1 MGP_CBAJ_G0032861.1 mouse_genomes_project 7 156440039 156441774 + Urah protein_coding retained_intron MGP_CBAJ_T0081618.1 MGP_CBAJ_G0031455.1 mouse_genomes_project 7 19266510 19269857 - MGP_CBAJ_P0081618 Apoc4 protein_coding protein_coding MGP_CBAJ_T0008833.1 MGP_CBAJ_G0007123.1 mouse_genomes_project 7 86656334 86661887 - lincRNA lincRNA MGP_CBAJ_T0005060.1 MGP_CBAJ_G0004311.1 mouse_genomes_project 7 1597568 1619753 - Gm15494 antisense antisense MGP_CBAJ_T0005061.1 MGP_CBAJ_G0004311.1 mouse_genomes_project 7 1598340 1619789 - Gm15494 antisense antisense MGP_CBAJ_T0015483.1 MGP_CBAJ_G0013595.1 mouse_genomes_project 7 12246159 12260943 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0082049.1 MGP_CBAJ_G0031577.1 mouse_genomes_project 7 27989651 28023790 - MGP_CBAJ_P0082049 Ltbp4 protein_coding protein_coding MGP_CBAJ_T0082050.1 MGP_CBAJ_G0031577.1 mouse_genomes_project 7 27989655 28019772 - MGP_CBAJ_P0082050 Ltbp4 protein_coding protein_coding MGP_CBAJ_T0082051.1 MGP_CBAJ_G0031577.1 mouse_genomes_project 7 27989657 28023790 - MGP_CBAJ_P0082051 Ltbp4 protein_coding protein_coding MGP_CBAJ_T0082052.1 MGP_CBAJ_G0031577.1 mouse_genomes_project 7 27990513 28019722 - MGP_CBAJ_P0082052 Ltbp4 protein_coding protein_coding MGP_CBAJ_T0082053.1 MGP_CBAJ_G0031577.1 mouse_genomes_project 7 27990594 27991486 - Ltbp4 protein_coding retained_intron MGP_CBAJ_T0082054.1 MGP_CBAJ_G0031577.1 mouse_genomes_project 7 27991138 27996805 - MGP_CBAJ_P0082054 Ltbp4 protein_coding protein_coding MGP_CBAJ_T0082055.1 MGP_CBAJ_G0031577.1 mouse_genomes_project 7 27992075 27996824 - Ltbp4 protein_coding retained_intron MGP_CBAJ_T0082056.1 MGP_CBAJ_G0031577.1 mouse_genomes_project 7 27993492 27996608 - Ltbp4 protein_coding retained_intron MGP_CBAJ_T0082057.1 MGP_CBAJ_G0031577.1 mouse_genomes_project 7 27997705 28019757 - Ltbp4 protein_coding processed_transcript MGP_CBAJ_T0085789.1 MGP_CBAJ_G0032610.1 mouse_genomes_project 7 134329367 134374470 + MGP_CBAJ_P0085789 Mettl9 protein_coding protein_coding MGP_CBAJ_T0085324.1 MGP_CBAJ_G0032495.1 mouse_genomes_project 7 120492273 120493224 + MGP_CBAJ_P0085324 Olfr507 protein_coding protein_coding MGP_CBAJ_T0008744.1 MGP_CBAJ_G0007057.1 mouse_genomes_project 7 40657358 40668914 - Gm45106 lincRNA lincRNA MGP_CBAJ_T0102138.1 MGP_CBAJ_G0040167.1 mouse_genomes_project 7 47935469 47939675 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0002272.1 MGP_CBAJ_G0002186.1 mouse_genomes_project 7 141576379 141577781 + TEC TEC MGP_CBAJ_T0010708.1 MGP_CBAJ_G0008846.1 mouse_genomes_project 7 676597 676683 + Mir3572 miRNA miRNA MGP_CBAJ_T0080998.1 MGP_CBAJ_G0031224.1 mouse_genomes_project 7 1991207 1993417 + MGP_CBAJ_P0080998 Rpl28 protein_coding protein_coding MGP_CBAJ_T0080999.1 MGP_CBAJ_G0031224.1 mouse_genomes_project 7 1991323 1992877 + MGP_CBAJ_P0080999 Rpl28 protein_coding protein_coding MGP_CBAJ_T0081000.1 MGP_CBAJ_G0031224.1 mouse_genomes_project 7 1991731 1992159 + Rpl28 protein_coding retained_intron MGP_CBAJ_T0081001.1 MGP_CBAJ_G0031224.1 mouse_genomes_project 7 1991927 1992913 + MGP_CBAJ_P0081001 Rpl28 protein_coding protein_coding MGP_CBAJ_T0081002.1 MGP_CBAJ_G0031224.1 mouse_genomes_project 7 1992184 1992913 + Rpl28 protein_coding retained_intron MGP_CBAJ_T0082069.1 MGP_CBAJ_G0031580.1 mouse_genomes_project 7 28041611 28046370 - MGP_CBAJ_P0082069 Gm20479 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086320.1 MGP_CBAJ_G0032709.1 mouse_genomes_project 7 141560669 141567639 - MGP_CBAJ_P0086320 Zfp689 protein_coding protein_coding MGP_CBAJ_T0086321.1 MGP_CBAJ_G0032709.1 mouse_genomes_project 7 141562235 141567474 - MGP_CBAJ_P0086321 Zfp689 protein_coding protein_coding MGP_CBAJ_T0084737.1 MGP_CBAJ_G0032233.1 mouse_genomes_project 7 110761566 110795117 + MGP_CBAJ_P0084737 P4ha3 protein_coding protein_coding MGP_CBAJ_T0084738.1 MGP_CBAJ_G0032233.1 mouse_genomes_project 7 110761566 110795117 + MGP_CBAJ_P0084738 P4ha3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084739.1 MGP_CBAJ_G0032233.1 mouse_genomes_project 7 110761588 110774429 + P4ha3 protein_coding retained_intron MGP_CBAJ_T0084740.1 MGP_CBAJ_G0032233.1 mouse_genomes_project 7 110769863 110795116 + MGP_CBAJ_P0084740 P4ha3 protein_coding protein_coding MGP_CBAJ_T0083046.1 MGP_CBAJ_G0031812.1 mouse_genomes_project 7 47381683 47388615 + MGP_CBAJ_P0083046 Klk14 protein_coding protein_coding MGP_CBAJ_T0082121.1 MGP_CBAJ_G0031591.1 mouse_genomes_project 7 28427955 28446167 - MGP_CBAJ_P0082121 Map3k10 protein_coding protein_coding MGP_CBAJ_T0082122.1 MGP_CBAJ_G0031591.1 mouse_genomes_project 7 28428244 28446171 - MGP_CBAJ_P0082122 Map3k10 protein_coding protein_coding MGP_CBAJ_T0082123.1 MGP_CBAJ_G0031591.1 mouse_genomes_project 7 28435732 28436682 - Map3k10 protein_coding retained_intron MGP_CBAJ_T0082124.1 MGP_CBAJ_G0031591.1 mouse_genomes_project 7 28435754 28445930 - Map3k10 protein_coding retained_intron MGP_CBAJ_T0082125.1 MGP_CBAJ_G0031591.1 mouse_genomes_project 7 28439722 28446154 - MGP_CBAJ_P0082125 Map3k10 protein_coding protein_coding MGP_CBAJ_T0086805.1 MGP_CBAJ_G0032800.1 mouse_genomes_project 7 149875352 149934620 - MGP_CBAJ_P0086805 Fam196a protein_coding protein_coding MGP_CBAJ_T0082371.1 MGP_CBAJ_G0031657.1 mouse_genomes_project 7 31092965 31114746 + MGP_CBAJ_P0082371 Zfp790 protein_coding protein_coding MGP_CBAJ_T0082372.1 MGP_CBAJ_G0031657.1 mouse_genomes_project 7 31092965 31114746 + MGP_CBAJ_P0082372 Zfp790 protein_coding protein_coding MGP_CBAJ_T0086734.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147776142 147922745 - MGP_CBAJ_P0086734 Ctbp2 protein_coding protein_coding MGP_CBAJ_T0086735.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147776142 147806127 - MGP_CBAJ_P0086735 Ctbp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086736.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147776142 147922946 - MGP_CBAJ_P0086736 Ctbp2 protein_coding protein_coding MGP_CBAJ_T0086737.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147776142 147805885 - MGP_CBAJ_P0086737 Ctbp2 protein_coding protein_coding MGP_CBAJ_T0086738.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147780113 147816603 - MGP_CBAJ_P0086738 Ctbp2 protein_coding protein_coding MGP_CBAJ_T0086739.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147783582 147921780 - MGP_CBAJ_P0086739 Ctbp2 protein_coding protein_coding MGP_CBAJ_T0086740.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147805103 147923038 - Ctbp2 protein_coding processed_transcript MGP_CBAJ_T0086741.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147805103 147922927 - Ctbp2 protein_coding processed_transcript MGP_CBAJ_T0086742.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147805293 147922925 - MGP_CBAJ_P0086742 Ctbp2 protein_coding protein_coding MGP_CBAJ_T0086743.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147805367 147912283 - Ctbp2 protein_coding processed_transcript MGP_CBAJ_T0086744.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147805472 147822939 - Ctbp2 protein_coding processed_transcript MGP_CBAJ_T0086745.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147805490 147923239 - Ctbp2 protein_coding processed_transcript MGP_CBAJ_T0086746.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147805758 147922195 - MGP_CBAJ_P0086746 Ctbp2 protein_coding protein_coding MGP_CBAJ_T0086747.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147805800 147923004 - MGP_CBAJ_P0086747 Ctbp2 protein_coding protein_coding MGP_CBAJ_T0086748.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147818528 147925852 - MGP_CBAJ_P0086748 Ctbp2 protein_coding protein_coding MGP_CBAJ_T0086749.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147818546 147911375 - MGP_CBAJ_P0086749 Ctbp2 protein_coding protein_coding MGP_CBAJ_T0086750.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147818547 147922891 - MGP_CBAJ_P0086750 Ctbp2 protein_coding protein_coding MGP_CBAJ_T0086751.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147818590 147923325 - MGP_CBAJ_P0086751 Ctbp2 protein_coding protein_coding MGP_CBAJ_T0086752.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147839184 147923325 - Ctbp2 protein_coding processed_transcript MGP_CBAJ_T0086753.1 MGP_CBAJ_G0032789.1 mouse_genomes_project 7 147878585 147922763 - Ctbp2 protein_coding retained_intron MGP_CBAJ_T0010788.1 MGP_CBAJ_G0008926.1 mouse_genomes_project 7 112612013 112612109 + Gm22655 miRNA miRNA MGP_CBAJ_T0011568.1 MGP_CBAJ_G0009706.1 mouse_genomes_project 7 135949721 135949990 + Gm26414 misc_RNA misc_RNA MGP_CBAJ_T0015680.1 MGP_CBAJ_G0013792.1 mouse_genomes_project 7 136354797 136355124 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100778.1 MGP_CBAJ_G0039033.1 mouse_genomes_project 7 159464663 159464790 - Gm23297 snoRNA snoRNA MGP_CBAJ_T0008873.1 MGP_CBAJ_G0007145.1 mouse_genomes_project 7 109591817 109598254 - Gm26705 lincRNA lincRNA MGP_CBAJ_T0083475.1 MGP_CBAJ_G0031923.1 mouse_genomes_project 7 50087764 50089243 + Kdelr1 protein_coding processed_transcript MGP_CBAJ_T0083476.1 MGP_CBAJ_G0031923.1 mouse_genomes_project 7 50087888 50098612 + MGP_CBAJ_P0083476 Kdelr1 protein_coding protein_coding MGP_CBAJ_T0083477.1 MGP_CBAJ_G0031923.1 mouse_genomes_project 7 50096314 50098231 + Kdelr1 protein_coding processed_transcript MGP_CBAJ_T0085908.1 MGP_CBAJ_G0032634.1 mouse_genomes_project 7 137054787 137060501 + MGP_CBAJ_P0085908 Aqp8 protein_coding protein_coding MGP_CBAJ_T0085909.1 MGP_CBAJ_G0032634.1 mouse_genomes_project 7 137054808 137060483 + MGP_CBAJ_P0085909 Aqp8 protein_coding protein_coding MGP_CBAJ_T0085910.1 MGP_CBAJ_G0032634.1 mouse_genomes_project 7 137056247 137060495 + Aqp8 protein_coding processed_transcript MGP_CBAJ_T0099504.1 MGP_CBAJ_G0037759.1 mouse_genomes_project 7 101095033 101095178 - Gm23928 snRNA snRNA MGP_CBAJ_T0084768.1 MGP_CBAJ_G0032238.1 mouse_genomes_project 7 110991091 111007398 - MGP_CBAJ_P0084768 Dnajb13 protein_coding protein_coding MGP_CBAJ_T0084769.1 MGP_CBAJ_G0032238.1 mouse_genomes_project 7 110991094 111005827 - Dnajb13 protein_coding processed_transcript MGP_CBAJ_T0084770.1 MGP_CBAJ_G0032238.1 mouse_genomes_project 7 110991152 111004229 - Dnajb13 protein_coding processed_transcript MGP_CBAJ_T0086891.1 MGP_CBAJ_G0032825.1 mouse_genomes_project 7 155430106 155431430 + MGP_CBAJ_P0086891 Utf1 protein_coding protein_coding MGP_CBAJ_T0102080.1 MGP_CBAJ_G0040110.1 mouse_genomes_project 7 12947953 12948395 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0087088.1 MGP_CBAJ_G0032890.1 mouse_genomes_project 7 156940841 156941644 - MGP_CBAJ_P0087088 Sct protein_coding protein_coding MGP_CBAJ_T0087089.1 MGP_CBAJ_G0032890.1 mouse_genomes_project 7 156940864 156941642 - MGP_CBAJ_P0087089 Sct protein_coding protein_coding MGP_CBAJ_T0008741.1 MGP_CBAJ_G0007054.1 mouse_genomes_project 7 39624927 39626083 + Gm28075 lincRNA lincRNA MGP_CBAJ_T0082166.1 MGP_CBAJ_G0031608.1 mouse_genomes_project 7 29204864 29211419 - MGP_CBAJ_P0082166 Timm50 protein_coding protein_coding MGP_CBAJ_T0082167.1 MGP_CBAJ_G0031608.1 mouse_genomes_project 7 29205170 29206011 - Timm50 protein_coding retained_intron MGP_CBAJ_T0082168.1 MGP_CBAJ_G0031608.1 mouse_genomes_project 7 29205774 29207365 - Timm50 protein_coding retained_intron MGP_CBAJ_T0082169.1 MGP_CBAJ_G0031608.1 mouse_genomes_project 7 29208852 29211384 - Timm50 protein_coding retained_intron MGP_CBAJ_T0082170.1 MGP_CBAJ_G0031608.1 mouse_genomes_project 7 29209563 29211403 - Timm50 protein_coding retained_intron MGP_CBAJ_T0082171.1 MGP_CBAJ_G0031608.1 mouse_genomes_project 7 29210260 29211286 - Timm50 protein_coding processed_transcript MGP_CBAJ_T0084989.1 MGP_CBAJ_G0032287.1 mouse_genomes_project 7 113544498 113545446 + MGP_CBAJ_P0084989 Olfr555 protein_coding protein_coding MGP_CBAJ_T0087358.1 MGP_CBAJ_G0032940.1 mouse_genomes_project 7 158973570 158975415 + MGP_CBAJ_P0087358 Tssc4 protein_coding protein_coding MGP_CBAJ_T0087359.1 MGP_CBAJ_G0032940.1 mouse_genomes_project 7 158973662 158974868 + MGP_CBAJ_P0087359 Tssc4 protein_coding protein_coding MGP_CBAJ_T0087360.1 MGP_CBAJ_G0032940.1 mouse_genomes_project 7 158973689 158975409 + MGP_CBAJ_P0087360 Tssc4 protein_coding protein_coding MGP_CBAJ_T0087361.1 MGP_CBAJ_G0032940.1 mouse_genomes_project 7 158973689 158975409 + MGP_CBAJ_P0087361 Tssc4 protein_coding protein_coding MGP_CBAJ_T0087362.1 MGP_CBAJ_G0032940.1 mouse_genomes_project 7 158973745 158974867 + MGP_CBAJ_P0087362 Tssc4 protein_coding protein_coding MGP_CBAJ_T0087363.1 MGP_CBAJ_G0032940.1 mouse_genomes_project 7 158973865 158974931 + MGP_CBAJ_P0087363 Tssc4 protein_coding protein_coding MGP_CBAJ_T0008742.1 MGP_CBAJ_G0007055.1 mouse_genomes_project 7 39801720 39807666 + Gm28077 lincRNA lincRNA MGP_CBAJ_T0086121.1 MGP_CBAJ_G0032670.1 mouse_genomes_project 7 140762049 140768680 - MGP_CBAJ_P0086121 Ppp4c protein_coding protein_coding MGP_CBAJ_T0086122.1 MGP_CBAJ_G0032670.1 mouse_genomes_project 7 140762051 140768524 - MGP_CBAJ_P0086122 Ppp4c protein_coding protein_coding MGP_CBAJ_T0086123.1 MGP_CBAJ_G0032670.1 mouse_genomes_project 7 140762342 140764594 - MGP_CBAJ_P0086123 Ppp4c protein_coding protein_coding MGP_CBAJ_T0086124.1 MGP_CBAJ_G0032670.1 mouse_genomes_project 7 140762412 140763523 - MGP_CBAJ_P0086124 Ppp4c protein_coding protein_coding MGP_CBAJ_T0086125.1 MGP_CBAJ_G0032670.1 mouse_genomes_project 7 140762472 140768677 - MGP_CBAJ_P0086125 Ppp4c protein_coding nonsense_mediated_decay MGP_CBAJ_T0086126.1 MGP_CBAJ_G0032670.1 mouse_genomes_project 7 140763403 140765228 - MGP_CBAJ_P0086126 Ppp4c protein_coding protein_coding MGP_CBAJ_T0086127.1 MGP_CBAJ_G0032670.1 mouse_genomes_project 7 140763651 140768331 - MGP_CBAJ_P0086127 Ppp4c protein_coding nonsense_mediated_decay MGP_CBAJ_T0086128.1 MGP_CBAJ_G0032670.1 mouse_genomes_project 7 140763754 140765201 - Ppp4c protein_coding retained_intron MGP_CBAJ_T0086129.1 MGP_CBAJ_G0032670.1 mouse_genomes_project 7 140763847 140768650 - Ppp4c protein_coding retained_intron MGP_CBAJ_T0086130.1 MGP_CBAJ_G0032670.1 mouse_genomes_project 7 140766696 140768680 - Ppp4c protein_coding retained_intron MGP_CBAJ_T0086131.1 MGP_CBAJ_G0032670.1 mouse_genomes_project 7 140766720 140768666 - Ppp4c protein_coding retained_intron MGP_CBAJ_T0083728.1 MGP_CBAJ_G0031989.1 mouse_genomes_project 7 62975982 63432741 + MGP_CBAJ_P0083728 Gabrb3 protein_coding protein_coding MGP_CBAJ_T0083729.1 MGP_CBAJ_G0031989.1 mouse_genomes_project 7 63162421 63431579 + MGP_CBAJ_P0083729 Gabrb3 protein_coding protein_coding MGP_CBAJ_T0083730.1 MGP_CBAJ_G0031989.1 mouse_genomes_project 7 63163065 63432745 + MGP_CBAJ_P0083730 Gabrb3 protein_coding protein_coding MGP_CBAJ_T0083731.1 MGP_CBAJ_G0031989.1 mouse_genomes_project 7 63163076 63358153 + Gabrb3 protein_coding retained_intron MGP_CBAJ_T0083732.1 MGP_CBAJ_G0031989.1 mouse_genomes_project 7 63163433 63420318 + MGP_CBAJ_P0083732 Gabrb3 protein_coding protein_coding MGP_CBAJ_T0083733.1 MGP_CBAJ_G0031989.1 mouse_genomes_project 7 63384437 63420263 + Gabrb3 protein_coding retained_intron MGP_CBAJ_T0081132.1 MGP_CBAJ_G0031291.1 mouse_genomes_project 7 9710376 9711288 + MGP_CBAJ_P0081132 Vmn1r73 protein_coding protein_coding MGP_CBAJ_T0083710.1 MGP_CBAJ_G0031985.1 mouse_genomes_project 7 61478249 61500040 + MGP_CBAJ_P0083710 protein_coding protein_coding MGP_CBAJ_T0083711.1 MGP_CBAJ_G0031985.1 mouse_genomes_project 7 61478306 61686339 + MGP_CBAJ_P0083711 protein_coding protein_coding MGP_CBAJ_T0083712.1 MGP_CBAJ_G0031985.1 mouse_genomes_project 7 61478442 61686302 + MGP_CBAJ_P0083712 protein_coding protein_coding MGP_CBAJ_T0083713.1 MGP_CBAJ_G0031985.1 mouse_genomes_project 7 61478819 61544787 + MGP_CBAJ_P0083713 protein_coding protein_coding MGP_CBAJ_T0083714.1 MGP_CBAJ_G0031985.1 mouse_genomes_project 7 61478931 61685671 + MGP_CBAJ_P0083714 protein_coding protein_coding MGP_CBAJ_T0083715.1 MGP_CBAJ_G0031985.1 mouse_genomes_project 7 61479001 61504988 + protein_coding retained_intron MGP_CBAJ_T0083716.1 MGP_CBAJ_G0031985.1 mouse_genomes_project 7 61607872 61615439 + protein_coding processed_transcript MGP_CBAJ_T0083717.1 MGP_CBAJ_G0031985.1 mouse_genomes_project 7 61675038 61685640 + MGP_CBAJ_P0083717 protein_coding protein_coding MGP_CBAJ_T0081580.1 MGP_CBAJ_G0031441.1 mouse_genomes_project 7 18944104 18954627 + MGP_CBAJ_P0081580 Ckm protein_coding protein_coding MGP_CBAJ_T0085126.1 MGP_CBAJ_G0032394.1 mouse_genomes_project 7 115927158 115930343 - MGP_CBAJ_P0085126 protein_coding protein_coding MGP_CBAJ_T0082394.1 MGP_CBAJ_G0031663.1 mouse_genomes_project 7 31260993 31263365 + MGP_CBAJ_P0082394 protein_coding protein_coding MGP_CBAJ_T0081114.1 MGP_CBAJ_G0031277.1 mouse_genomes_project 7 4640728 4646681 - MGP_CBAJ_P0081114 Zfp773 protein_coding protein_coding MGP_CBAJ_T0101379.1 MGP_CBAJ_G0039448.1 mouse_genomes_project 7 44729886 44730355 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0102195.1 MGP_CBAJ_G0040224.1 mouse_genomes_project 7 98921950 98922163 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0018135.1 MGP_CBAJ_G0015420.1 mouse_genomes_project 7 82670092 82682331 + 1500012K07Rik processed_transcript lincRNA MGP_CBAJ_T0018136.1 MGP_CBAJ_G0015420.1 mouse_genomes_project 7 82670098 82695606 + 1500012K07Rik processed_transcript antisense MGP_CBAJ_T0018137.1 MGP_CBAJ_G0015420.1 mouse_genomes_project 7 82670098 82694027 + 1500012K07Rik processed_transcript lincRNA MGP_CBAJ_T0081291.1 MGP_CBAJ_G0031357.1 mouse_genomes_project 7 14925688 14950039 + MGP_CBAJ_P0081291 Zfp541 protein_coding protein_coding MGP_CBAJ_T0008845.1 MGP_CBAJ_G0007128.1 mouse_genomes_project 7 88170954 88172557 + Gm45202 lincRNA lincRNA MGP_CBAJ_T0008902.1 MGP_CBAJ_G0007161.1 mouse_genomes_project 7 133930725 133934807 - 9030407P20Rik lincRNA lincRNA MGP_CBAJ_T0008903.1 MGP_CBAJ_G0007161.1 mouse_genomes_project 7 133931021 133934847 - 9030407P20Rik lincRNA lincRNA MGP_CBAJ_T0084408.1 MGP_CBAJ_G0032130.1 mouse_genomes_project 7 93433067 93437275 + MGP_CBAJ_P0084408 Olfr291 protein_coding protein_coding MGP_CBAJ_T0081430.1 MGP_CBAJ_G0031394.1 mouse_genomes_project 7 17173307 17179765 + MGP_CBAJ_P0081430 Ceacam11 protein_coding protein_coding MGP_CBAJ_T0084320.1 MGP_CBAJ_G0032102.1 mouse_genomes_project 7 89815412 89844265 + MGP_CBAJ_P0084320 Whamm protein_coding protein_coding MGP_CBAJ_T0005214.1 MGP_CBAJ_G0004418.1 mouse_genomes_project 7 141724558 141730043 - Gm44759 antisense antisense MGP_CBAJ_T0082653.1 MGP_CBAJ_G0031720.1 mouse_genomes_project 7 32422041 32423349 - MGP_CBAJ_P0082653 protein_coding protein_coding MGP_CBAJ_T0086144.1 MGP_CBAJ_G0032672.1 mouse_genomes_project 7 140773851 140814798 + MGP_CBAJ_P0086144 Fam57b protein_coding protein_coding MGP_CBAJ_T0086145.1 MGP_CBAJ_G0032672.1 mouse_genomes_project 7 140794623 140803721 + Fam57b protein_coding processed_transcript MGP_CBAJ_T0086146.1 MGP_CBAJ_G0032672.1 mouse_genomes_project 7 140795976 140799166 + Fam57b protein_coding processed_transcript MGP_CBAJ_T0086147.1 MGP_CBAJ_G0032672.1 mouse_genomes_project 7 140798820 140812114 + MGP_CBAJ_P0086147 Fam57b protein_coding protein_coding MGP_CBAJ_T0086148.1 MGP_CBAJ_G0032672.1 mouse_genomes_project 7 140798821 140814802 + MGP_CBAJ_P0086148 Fam57b protein_coding protein_coding MGP_CBAJ_T0086149.1 MGP_CBAJ_G0032672.1 mouse_genomes_project 7 140808645 140814800 + MGP_CBAJ_P0086149 Fam57b protein_coding protein_coding MGP_CBAJ_T0015602.1 MGP_CBAJ_G0013714.1 mouse_genomes_project 7 71623285 71623604 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005190.1 MGP_CBAJ_G0004401.1 mouse_genomes_project 7 124822491 124831204 - Parvaos antisense antisense MGP_CBAJ_T0086961.1 MGP_CBAJ_G0032858.1 mouse_genomes_project 7 156354930 156366159 + MGP_CBAJ_P0086961 Cyp2e1 protein_coding protein_coding MGP_CBAJ_T0085303.1 MGP_CBAJ_G0032474.1 mouse_genomes_project 7 119704068 119705001 + MGP_CBAJ_P0085303 Olfr473 protein_coding protein_coding MGP_CBAJ_T0082218.1 MGP_CBAJ_G0031623.1 mouse_genomes_project 7 29574456 29600646 - MGP_CBAJ_P0082218 Acp7 protein_coding protein_coding MGP_CBAJ_T0082219.1 MGP_CBAJ_G0031623.1 mouse_genomes_project 7 29583333 29600086 - Acp7 protein_coding processed_transcript MGP_CBAJ_T0082220.1 MGP_CBAJ_G0031623.1 mouse_genomes_project 7 29583822 29600086 - Acp7 protein_coding processed_transcript MGP_CBAJ_T0082221.1 MGP_CBAJ_G0031623.1 mouse_genomes_project 7 29599069 29600079 - Acp7 protein_coding processed_transcript MGP_CBAJ_T0082222.1 MGP_CBAJ_G0031623.1 mouse_genomes_project 7 29599102 29600911 - Acp7 protein_coding processed_transcript MGP_CBAJ_T0081121.1 MGP_CBAJ_G0031284.1 mouse_genomes_project 7 8279297 8287463 - MGP_CBAJ_P0081121 Zik1 protein_coding protein_coding MGP_CBAJ_T0082018.1 MGP_CBAJ_G0031571.1 mouse_genomes_project 7 27817511 27818919 - MGP_CBAJ_P0082018 Mia protein_coding protein_coding MGP_CBAJ_T0082019.1 MGP_CBAJ_G0031571.1 mouse_genomes_project 7 27817513 27818897 - Mia protein_coding retained_intron MGP_CBAJ_T0082020.1 MGP_CBAJ_G0031571.1 mouse_genomes_project 7 27817513 27818927 - MGP_CBAJ_P0082020 Mia protein_coding protein_coding MGP_CBAJ_T0082021.1 MGP_CBAJ_G0031571.1 mouse_genomes_project 7 27818258 27818766 - Mia protein_coding processed_transcript MGP_CBAJ_T0082996.1 MGP_CBAJ_G0031795.1 mouse_genomes_project 7 47077231 47080999 + MGP_CBAJ_P0082996 Gm38999 protein_coding protein_coding MGP_CBAJ_T0002230.1 MGP_CBAJ_G0002144.1 mouse_genomes_project 7 85082252 85083701 + TEC TEC MGP_CBAJ_T0008745.1 MGP_CBAJ_G0007058.1 mouse_genomes_project 7 40666532 40696941 + lincRNA lincRNA MGP_CBAJ_T0086862.1 MGP_CBAJ_G0032819.1 mouse_genomes_project 7 154633323 154652106 + MGP_CBAJ_P0086862 Pwwp2b protein_coding protein_coding MGP_CBAJ_T0086863.1 MGP_CBAJ_G0032819.1 mouse_genomes_project 7 154633323 154652106 + MGP_CBAJ_P0086863 Pwwp2b protein_coding protein_coding MGP_CBAJ_T0081409.1 MGP_CBAJ_G0031387.1 mouse_genomes_project 7 16032720 16059342 - MGP_CBAJ_P0081409 Ppp5c protein_coding protein_coding MGP_CBAJ_T0081410.1 MGP_CBAJ_G0031387.1 mouse_genomes_project 7 16033183 16035151 - Ppp5c protein_coding retained_intron MGP_CBAJ_T0081411.1 MGP_CBAJ_G0031387.1 mouse_genomes_project 7 16035220 16043615 - Ppp5c protein_coding retained_intron MGP_CBAJ_T0081412.1 MGP_CBAJ_G0031387.1 mouse_genomes_project 7 16035792 16059453 - Ppp5c protein_coding processed_transcript MGP_CBAJ_T0081413.1 MGP_CBAJ_G0031387.1 mouse_genomes_project 7 16035801 16037207 - Ppp5c protein_coding retained_intron MGP_CBAJ_T0081414.1 MGP_CBAJ_G0031387.1 mouse_genomes_project 7 16036595 16059423 - Ppp5c protein_coding processed_transcript MGP_CBAJ_T0081415.1 MGP_CBAJ_G0031387.1 mouse_genomes_project 7 16036619 16038266 - Ppp5c protein_coding retained_intron MGP_CBAJ_T0081416.1 MGP_CBAJ_G0031387.1 mouse_genomes_project 7 16038076 16056200 - Ppp5c protein_coding processed_transcript MGP_CBAJ_T0081417.1 MGP_CBAJ_G0031387.1 mouse_genomes_project 7 16043607 16059144 - Ppp5c protein_coding processed_transcript MGP_CBAJ_T0081418.1 MGP_CBAJ_G0031387.1 mouse_genomes_project 7 16053829 16059318 - Ppp5c protein_coding processed_transcript MGP_CBAJ_T0102137.1 MGP_CBAJ_G0040166.1 mouse_genomes_project 7 47930026 47932024 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010813.1 MGP_CBAJ_G0008951.1 mouse_genomes_project 7 158430719 158430803 - Mir675 miRNA miRNA MGP_CBAJ_T0005199.1 MGP_CBAJ_G0004407.1 mouse_genomes_project 7 134639586 134731718 - Gm45077 antisense antisense MGP_CBAJ_T0084649.1 MGP_CBAJ_G0032207.1 mouse_genomes_project 7 108729673 108738639 + MGP_CBAJ_P0084649 Lrrc32 protein_coding protein_coding MGP_CBAJ_T0084650.1 MGP_CBAJ_G0032207.1 mouse_genomes_project 7 108730085 108742582 + MGP_CBAJ_P0084650 Lrrc32 protein_coding protein_coding MGP_CBAJ_T0084651.1 MGP_CBAJ_G0032207.1 mouse_genomes_project 7 108734605 108742233 + MGP_CBAJ_P0084651 Lrrc32 protein_coding protein_coding MGP_CBAJ_T0084755.1 MGP_CBAJ_G0032236.1 mouse_genomes_project 7 110959396 110973396 + Ucp3 protein_coding retained_intron MGP_CBAJ_T0084756.1 MGP_CBAJ_G0032236.1 mouse_genomes_project 7 110959397 110974407 + MGP_CBAJ_P0084756 Ucp3 protein_coding protein_coding MGP_CBAJ_T0084757.1 MGP_CBAJ_G0032236.1 mouse_genomes_project 7 110959399 110973276 + MGP_CBAJ_P0084757 Ucp3 protein_coding protein_coding MGP_CBAJ_T0084758.1 MGP_CBAJ_G0032236.1 mouse_genomes_project 7 110959400 110973379 + Ucp3 protein_coding retained_intron MGP_CBAJ_T0098461.1 MGP_CBAJ_G0036722.1 mouse_genomes_project 7 160532093 160532554 - Gm14376 sense_intronic sense_intronic MGP_CBAJ_T0005213.1 MGP_CBAJ_G0004417.1 mouse_genomes_project 7 141689182 141705077 - Gm28198 antisense antisense MGP_CBAJ_T0005554.1 MGP_CBAJ_G0004670.1 mouse_genomes_project 7 87887119 87888918 + 5430400D12Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_CBAJ_T0015526.1 MGP_CBAJ_G0013638.1 mouse_genomes_project 7 27673043 27673401 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010815.1 MGP_CBAJ_G0008953.1 mouse_genomes_project 7 159510004 159510093 - Mir7064 miRNA miRNA MGP_CBAJ_T0087235.1 MGP_CBAJ_G0032914.1 mouse_genomes_project 7 157739191 157803103 - MGP_CBAJ_P0087235 Mob2 protein_coding protein_coding MGP_CBAJ_T0085131.1 MGP_CBAJ_G0032398.1 mouse_genomes_project 7 116081987 116111428 - MGP_CBAJ_P0085131 protein_coding protein_coding MGP_CBAJ_T0085132.1 MGP_CBAJ_G0032399.1 mouse_genomes_project 7 116110558 116111539 - MGP_CBAJ_P0085132 Olfr667 protein_coding protein_coding MGP_CBAJ_T0099489.1 MGP_CBAJ_G0037744.1 mouse_genomes_project 7 57116125 57116281 - Gm22211 snRNA snRNA MGP_CBAJ_T0081308.1 MGP_CBAJ_G0031361.1 mouse_genomes_project 7 15043258 15046988 + MGP_CBAJ_P0081308 Meis3 protein_coding protein_coding MGP_CBAJ_T0081309.1 MGP_CBAJ_G0031361.1 mouse_genomes_project 7 15043307 15046986 + MGP_CBAJ_P0081309 Meis3 protein_coding protein_coding MGP_CBAJ_T0081310.1 MGP_CBAJ_G0031361.1 mouse_genomes_project 7 15043443 15060283 + MGP_CBAJ_P0081310 Meis3 protein_coding protein_coding MGP_CBAJ_T0081311.1 MGP_CBAJ_G0031361.1 mouse_genomes_project 7 15043556 15060280 + Meis3 protein_coding retained_intron MGP_CBAJ_T0081312.1 MGP_CBAJ_G0031361.1 mouse_genomes_project 7 15043598 15060283 + MGP_CBAJ_P0081312 Meis3 protein_coding protein_coding MGP_CBAJ_T0081313.1 MGP_CBAJ_G0031361.1 mouse_genomes_project 7 15043598 15060283 + MGP_CBAJ_P0081313 Meis3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081314.1 MGP_CBAJ_G0031361.1 mouse_genomes_project 7 15045893 15046629 + Meis3 protein_coding retained_intron MGP_CBAJ_T0081315.1 MGP_CBAJ_G0031361.1 mouse_genomes_project 7 15047235 15059294 + MGP_CBAJ_P0081315 Meis3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081316.1 MGP_CBAJ_G0031361.1 mouse_genomes_project 7 15055095 15060283 + Meis3 protein_coding retained_intron MGP_CBAJ_T0083943.1 MGP_CBAJ_G0032033.1 mouse_genomes_project 7 74748339 74790033 - MGP_CBAJ_P0083943 Pgpep1l protein_coding protein_coding MGP_CBAJ_T0085141.1 MGP_CBAJ_G0032408.1 mouse_genomes_project 7 116377318 116378266 + MGP_CBAJ_P0085141 protein_coding protein_coding MGP_CBAJ_T0005110.1 MGP_CBAJ_G0004346.1 mouse_genomes_project 7 32678700 32681922 + G630030J09Rik antisense antisense MGP_CBAJ_T0085000.1 MGP_CBAJ_G0032297.1 mouse_genomes_project 7 113801135 113803939 - MGP_CBAJ_P0085000 Olfr569 protein_coding protein_coding MGP_CBAJ_T0011553.1 MGP_CBAJ_G0009691.1 mouse_genomes_project 7 14784324 14784572 + Gm24576 misc_RNA misc_RNA MGP_CBAJ_T0015476.1 MGP_CBAJ_G0013588.1 mouse_genomes_project 7 10907573 10913775 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0083428.1 MGP_CBAJ_G0031912.1 mouse_genomes_project 7 49874021 49879089 + MGP_CBAJ_P0083428 Dbp protein_coding protein_coding MGP_CBAJ_T0083429.1 MGP_CBAJ_G0031912.1 mouse_genomes_project 7 49874557 49879048 + MGP_CBAJ_P0083429 Dbp protein_coding protein_coding MGP_CBAJ_T0083430.1 MGP_CBAJ_G0031912.1 mouse_genomes_project 7 49874557 49879048 + MGP_CBAJ_P0083430 Dbp protein_coding protein_coding MGP_CBAJ_T0083431.1 MGP_CBAJ_G0031912.1 mouse_genomes_project 7 49876037 49878962 + Dbp protein_coding retained_intron MGP_CBAJ_T0083432.1 MGP_CBAJ_G0031912.1 mouse_genomes_project 7 49876822 49878830 + Dbp protein_coding retained_intron MGP_CBAJ_T0085146.1 MGP_CBAJ_G0032413.1 mouse_genomes_project 7 116658560 116659609 + MGP_CBAJ_P0085146 protein_coding protein_coding MGP_CBAJ_T0083760.1 MGP_CBAJ_G0031998.1 mouse_genomes_project 7 68398361 68400908 - MGP_CBAJ_P0083760 Mkrn3 protein_coding protein_coding MGP_CBAJ_T0086697.1 MGP_CBAJ_G0032780.1 mouse_genomes_project 7 146754986 146871613 - MGP_CBAJ_P0086697 Cpxm2 protein_coding protein_coding MGP_CBAJ_T0086698.1 MGP_CBAJ_G0032780.1 mouse_genomes_project 7 146766800 146773562 - Cpxm2 protein_coding retained_intron MGP_CBAJ_T0086699.1 MGP_CBAJ_G0032780.1 mouse_genomes_project 7 146769233 146871496 - Cpxm2 protein_coding retained_intron MGP_CBAJ_T0086700.1 MGP_CBAJ_G0032780.1 mouse_genomes_project 7 146823409 146859571 - Cpxm2 protein_coding processed_transcript MGP_CBAJ_T0083754.1 MGP_CBAJ_G0031993.1 mouse_genomes_project 7 65514837 65540490 - MGP_CBAJ_P0083754 Snrpn protein_coding protein_coding MGP_CBAJ_T0083755.1 MGP_CBAJ_G0031993.1 mouse_genomes_project 7 65514844 65730780 - MGP_CBAJ_P0083755 Snrpn protein_coding protein_coding MGP_CBAJ_T0087241.1 MGP_CBAJ_G0032919.1 mouse_genomes_project 7 158033293 158034220 - MGP_CBAJ_P0087241 protein_coding protein_coding MGP_CBAJ_T0084939.1 MGP_CBAJ_G0032268.1 mouse_genomes_project 7 112869777 112875743 - MGP_CBAJ_P0084939 Art5 protein_coding protein_coding MGP_CBAJ_T0084940.1 MGP_CBAJ_G0032268.1 mouse_genomes_project 7 112869778 112873128 - MGP_CBAJ_P0084940 Art5 protein_coding protein_coding MGP_CBAJ_T0084941.1 MGP_CBAJ_G0032268.1 mouse_genomes_project 7 112870012 112872838 - MGP_CBAJ_P0084941 Art5 protein_coding protein_coding MGP_CBAJ_T0084942.1 MGP_CBAJ_G0032268.1 mouse_genomes_project 7 112870012 112872392 - MGP_CBAJ_P0084942 Art5 protein_coding protein_coding MGP_CBAJ_T0080966.1 MGP_CBAJ_G0031217.1 mouse_genomes_project 7 1887087 1915459 - MGP_CBAJ_P0080966 Tmem150b protein_coding protein_coding MGP_CBAJ_T0080968.1 MGP_CBAJ_G0031217.1 mouse_genomes_project 7 1897862 1915292 - MGP_CBAJ_P0080968 Tmem150b protein_coding protein_coding MGP_CBAJ_T0015644.1 MGP_CBAJ_G0013756.1 mouse_genomes_project 7 107783950 107784429 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0084414.1 MGP_CBAJ_G0032136.1 mouse_genomes_project 7 95050876 95051958 - MGP_CBAJ_P0084414 Olfr310 protein_coding protein_coding MGP_CBAJ_T0081469.1 MGP_CBAJ_G0031414.1 mouse_genomes_project 7 18384283 18423815 + MGP_CBAJ_P0081469 protein_coding protein_coding MGP_CBAJ_T0084099.1 MGP_CBAJ_G0032060.1 mouse_genomes_project 7 87519019 87543337 - MGP_CBAJ_P0084099 Rhcg protein_coding protein_coding MGP_CBAJ_T0084100.1 MGP_CBAJ_G0032060.1 mouse_genomes_project 7 87519025 87520586 - MGP_CBAJ_P0084100 Rhcg protein_coding protein_coding MGP_CBAJ_T0084101.1 MGP_CBAJ_G0032060.1 mouse_genomes_project 7 87529438 87533545 - MGP_CBAJ_P0084101 Rhcg protein_coding protein_coding MGP_CBAJ_T0085145.1 MGP_CBAJ_G0032412.1 mouse_genomes_project 7 116658532 116659608 + MGP_CBAJ_P0085145 Olfr689 protein_coding protein_coding MGP_CBAJ_T0086673.1 MGP_CBAJ_G0032771.1 mouse_genomes_project 7 146037421 146052366 + MGP_CBAJ_P0086673 Fam24a protein_coding protein_coding MGP_CBAJ_T0081449.1 MGP_CBAJ_G0031408.1 mouse_genomes_project 7 18103002 18126337 + MGP_CBAJ_P0081449 protein_coding protein_coding MGP_CBAJ_T0082337.1 MGP_CBAJ_G0031652.1 mouse_genomes_project 7 30497280 30510976 + MGP_CBAJ_P0082337 Dpf1 protein_coding protein_coding MGP_CBAJ_T0082338.1 MGP_CBAJ_G0031652.1 mouse_genomes_project 7 30497305 30511289 + MGP_CBAJ_P0082338 Dpf1 protein_coding protein_coding MGP_CBAJ_T0082339.1 MGP_CBAJ_G0031652.1 mouse_genomes_project 7 30501562 30510608 + MGP_CBAJ_P0082339 Dpf1 protein_coding protein_coding MGP_CBAJ_T0082340.1 MGP_CBAJ_G0031652.1 mouse_genomes_project 7 30501650 30510600 + Dpf1 protein_coding retained_intron MGP_CBAJ_T0082341.1 MGP_CBAJ_G0031652.1 mouse_genomes_project 7 30501650 30510615 + MGP_CBAJ_P0082341 Dpf1 protein_coding protein_coding MGP_CBAJ_T0082342.1 MGP_CBAJ_G0031652.1 mouse_genomes_project 7 30501656 30511285 + Dpf1 protein_coding processed_transcript MGP_CBAJ_T0082343.1 MGP_CBAJ_G0031652.1 mouse_genomes_project 7 30503151 30506933 + MGP_CBAJ_P0082343 Dpf1 protein_coding protein_coding MGP_CBAJ_T0082344.1 MGP_CBAJ_G0031652.1 mouse_genomes_project 7 30503244 30505336 + Dpf1 protein_coding processed_transcript MGP_CBAJ_T0082345.1 MGP_CBAJ_G0031652.1 mouse_genomes_project 7 30506652 30509449 + MGP_CBAJ_P0082345 Dpf1 protein_coding protein_coding MGP_CBAJ_T0082346.1 MGP_CBAJ_G0031652.1 mouse_genomes_project 7 30507854 30510275 + Dpf1 protein_coding retained_intron MGP_CBAJ_T0099471.1 MGP_CBAJ_G0037726.1 mouse_genomes_project 7 1249202 1249373 + Gm23741 snRNA snRNA MGP_CBAJ_T0005555.1 MGP_CBAJ_G0004671.1 mouse_genomes_project 7 129137574 129138324 + AV356131 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_CBAJ_T0102198.1 MGP_CBAJ_G0040227.1 mouse_genomes_project 7 114103081 114104029 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0084001.1 MGP_CBAJ_G0032046.1 mouse_genomes_project 7 83703549 84746991 + MGP_CBAJ_P0084001 Agbl1 protein_coding protein_coding MGP_CBAJ_T0084002.1 MGP_CBAJ_G0032046.1 mouse_genomes_project 7 83912690 84246440 + MGP_CBAJ_P0084002 Agbl1 protein_coding protein_coding MGP_CBAJ_T0084003.1 MGP_CBAJ_G0032046.1 mouse_genomes_project 7 83912690 84316330 + MGP_CBAJ_P0084003 Agbl1 protein_coding protein_coding MGP_CBAJ_T0015646.1 MGP_CBAJ_G0013758.1 mouse_genomes_project 7 108670983 108671297 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0086083.1 MGP_CBAJ_G0032665.1 mouse_genomes_project 7 140667173 140671621 - MGP_CBAJ_P0086083 Coro1a protein_coding protein_coding MGP_CBAJ_T0086084.1 MGP_CBAJ_G0032665.1 mouse_genomes_project 7 140667173 140672217 - MGP_CBAJ_P0086084 Coro1a protein_coding protein_coding MGP_CBAJ_T0086085.1 MGP_CBAJ_G0032665.1 mouse_genomes_project 7 140667281 140670574 - MGP_CBAJ_P0086085 Coro1a protein_coding protein_coding MGP_CBAJ_T0086086.1 MGP_CBAJ_G0032665.1 mouse_genomes_project 7 140667711 140668628 - Coro1a protein_coding retained_intron MGP_CBAJ_T0086087.1 MGP_CBAJ_G0032665.1 mouse_genomes_project 7 140667755 140668661 - Coro1a protein_coding retained_intron MGP_CBAJ_T0086088.1 MGP_CBAJ_G0032665.1 mouse_genomes_project 7 140668391 140669496 - Coro1a protein_coding retained_intron MGP_CBAJ_T0086089.1 MGP_CBAJ_G0032665.1 mouse_genomes_project 7 140668392 140670575 - MGP_CBAJ_P0086089 Coro1a protein_coding protein_coding MGP_CBAJ_T0086090.1 MGP_CBAJ_G0032665.1 mouse_genomes_project 7 140668730 140669873 - Coro1a protein_coding retained_intron MGP_CBAJ_T0086091.1 MGP_CBAJ_G0032665.1 mouse_genomes_project 7 140668747 140672155 - MGP_CBAJ_P0086091 Coro1a protein_coding protein_coding MGP_CBAJ_T0086092.1 MGP_CBAJ_G0032665.1 mouse_genomes_project 7 140669291 140671948 - MGP_CBAJ_P0086092 Coro1a protein_coding protein_coding MGP_CBAJ_T0086093.1 MGP_CBAJ_G0032665.1 mouse_genomes_project 7 140669302 140677610 - MGP_CBAJ_P0086093 Coro1a protein_coding protein_coding MGP_CBAJ_T0086094.1 MGP_CBAJ_G0032665.1 mouse_genomes_project 7 140670232 140672154 - Coro1a protein_coding retained_intron MGP_CBAJ_T0102187.1 MGP_CBAJ_G0040216.1 mouse_genomes_project 7 94777867 94779470 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0084413.1 MGP_CBAJ_G0032135.1 mouse_genomes_project 7 95005526 95026668 - MGP_CBAJ_P0084413 Vmn2r76 protein_coding protein_coding MGP_CBAJ_T0015609.1 MGP_CBAJ_G0013721.1 mouse_genomes_project 7 80116070 80117070 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0085421.1 MGP_CBAJ_G0032530.1 mouse_genomes_project 7 122885136 122934149 + MGP_CBAJ_P0085421 Ampd3 protein_coding protein_coding MGP_CBAJ_T0085422.1 MGP_CBAJ_G0032530.1 mouse_genomes_project 7 122885263 122910920 + Ampd3 protein_coding processed_transcript MGP_CBAJ_T0085423.1 MGP_CBAJ_G0032530.1 mouse_genomes_project 7 122889524 122934635 + MGP_CBAJ_P0085423 Ampd3 protein_coding protein_coding MGP_CBAJ_T0085424.1 MGP_CBAJ_G0032530.1 mouse_genomes_project 7 122889708 122914359 + Ampd3 protein_coding retained_intron MGP_CBAJ_T0085425.1 MGP_CBAJ_G0032530.1 mouse_genomes_project 7 122890592 122908450 + MGP_CBAJ_P0085425 Ampd3 protein_coding protein_coding MGP_CBAJ_T0085426.1 MGP_CBAJ_G0032530.1 mouse_genomes_project 7 122891164 122908372 + MGP_CBAJ_P0085426 Ampd3 protein_coding protein_coding MGP_CBAJ_T0085427.1 MGP_CBAJ_G0032530.1 mouse_genomes_project 7 122897318 122910965 + MGP_CBAJ_P0085427 Ampd3 protein_coding protein_coding MGP_CBAJ_T0082665.1 MGP_CBAJ_G0031725.1 mouse_genomes_project 7 32554463 32569171 - MGP_CBAJ_P0082665 Fxyd5 protein_coding protein_coding MGP_CBAJ_T0082666.1 MGP_CBAJ_G0031725.1 mouse_genomes_project 7 32554467 32569813 - MGP_CBAJ_P0082666 Fxyd5 protein_coding protein_coding MGP_CBAJ_T0082667.1 MGP_CBAJ_G0031725.1 mouse_genomes_project 7 32554471 32564018 - Fxyd5 protein_coding retained_intron MGP_CBAJ_T0082668.1 MGP_CBAJ_G0031725.1 mouse_genomes_project 7 32554471 32559676 - Fxyd5 protein_coding retained_intron MGP_CBAJ_T0082669.1 MGP_CBAJ_G0031725.1 mouse_genomes_project 7 32554471 32562640 - MGP_CBAJ_P0082669 Fxyd5 protein_coding protein_coding MGP_CBAJ_T0082670.1 MGP_CBAJ_G0031725.1 mouse_genomes_project 7 32554471 32569450 - MGP_CBAJ_P0082670 Fxyd5 protein_coding protein_coding MGP_CBAJ_T0082671.1 MGP_CBAJ_G0031725.1 mouse_genomes_project 7 32554474 32569410 - MGP_CBAJ_P0082671 Fxyd5 protein_coding protein_coding MGP_CBAJ_T0082672.1 MGP_CBAJ_G0031725.1 mouse_genomes_project 7 32554474 32569410 - MGP_CBAJ_P0082672 Fxyd5 protein_coding protein_coding MGP_CBAJ_T0082673.1 MGP_CBAJ_G0031725.1 mouse_genomes_project 7 32554504 32569478 - MGP_CBAJ_P0082673 Fxyd5 protein_coding protein_coding MGP_CBAJ_T0082674.1 MGP_CBAJ_G0031725.1 mouse_genomes_project 7 32554548 32569472 - MGP_CBAJ_P0082674 Fxyd5 protein_coding protein_coding MGP_CBAJ_T0082675.1 MGP_CBAJ_G0031725.1 mouse_genomes_project 7 32558197 32569448 - MGP_CBAJ_P0082675 Fxyd5 protein_coding protein_coding MGP_CBAJ_T0082676.1 MGP_CBAJ_G0031725.1 mouse_genomes_project 7 32558226 32569445 - MGP_CBAJ_P0082676 Fxyd5 protein_coding protein_coding MGP_CBAJ_T0082677.1 MGP_CBAJ_G0031725.1 mouse_genomes_project 7 32558228 32569419 - MGP_CBAJ_P0082677 Fxyd5 protein_coding protein_coding MGP_CBAJ_T0082678.1 MGP_CBAJ_G0031725.1 mouse_genomes_project 7 32568502 32569472 - Fxyd5 protein_coding retained_intron MGP_CBAJ_T0082223.1 MGP_CBAJ_G0031624.1 mouse_genomes_project 7 29681023 29693513 + MGP_CBAJ_P0082223 Fbxo27 protein_coding protein_coding MGP_CBAJ_T0082224.1 MGP_CBAJ_G0031624.1 mouse_genomes_project 7 29681180 29693517 + MGP_CBAJ_P0082224 Fbxo27 protein_coding protein_coding MGP_CBAJ_T0082225.1 MGP_CBAJ_G0031624.1 mouse_genomes_project 7 29681213 29681689 + MGP_CBAJ_P0082225 Fbxo27 protein_coding protein_coding MGP_CBAJ_T0082226.1 MGP_CBAJ_G0031624.1 mouse_genomes_project 7 29690825 29692136 + Fbxo27 protein_coding processed_transcript MGP_CBAJ_T0086947.1 MGP_CBAJ_G0032844.1 mouse_genomes_project 7 155853912 155854890 + MGP_CBAJ_P0086947 Olfr527 protein_coding protein_coding MGP_CBAJ_T0084645.1 MGP_CBAJ_G0032206.1 mouse_genomes_project 7 108674212 108718262 + MGP_CBAJ_P0084645 Gucy2d protein_coding protein_coding MGP_CBAJ_T0084646.1 MGP_CBAJ_G0032206.1 mouse_genomes_project 7 108677218 108718261 + MGP_CBAJ_P0084646 Gucy2d protein_coding protein_coding MGP_CBAJ_T0084647.1 MGP_CBAJ_G0032206.1 mouse_genomes_project 7 108706299 108715973 + MGP_CBAJ_P0084647 Gucy2d protein_coding protein_coding MGP_CBAJ_T0084648.1 MGP_CBAJ_G0032206.1 mouse_genomes_project 7 108710155 108718261 + Gucy2d protein_coding processed_transcript MGP_CBAJ_T0008912.1 MGP_CBAJ_G0007168.1 mouse_genomes_project 7 139159569 139161722 + 4930571K23Rik lincRNA lincRNA MGP_CBAJ_T0008913.1 MGP_CBAJ_G0007168.1 mouse_genomes_project 7 139159720 139161716 + 4930571K23Rik lincRNA lincRNA MGP_CBAJ_T0098094.1 MGP_CBAJ_G0036367.1 mouse_genomes_project 7 129348663 129348788 - n-R5s157 rRNA rRNA MGP_CBAJ_T0084389.1 MGP_CBAJ_G0032124.1 mouse_genomes_project 7 92381016 92399784 + Mesdc2 protein_coding processed_transcript MGP_CBAJ_T0084390.1 MGP_CBAJ_G0032124.1 mouse_genomes_project 7 92392069 92403363 + MGP_CBAJ_P0084390 Mesdc2 protein_coding protein_coding MGP_CBAJ_T0084391.1 MGP_CBAJ_G0032124.1 mouse_genomes_project 7 92392071 92399611 + MGP_CBAJ_P0084391 Mesdc2 protein_coding protein_coding MGP_CBAJ_T0084392.1 MGP_CBAJ_G0032124.1 mouse_genomes_project 7 92392399 92399924 + MGP_CBAJ_P0084392 Mesdc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0101380.1 MGP_CBAJ_G0039449.1 mouse_genomes_project 7 44840182 44862904 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101381.1 MGP_CBAJ_G0039449.1 mouse_genomes_project 7 44840195 44870023 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101382.1 MGP_CBAJ_G0039449.1 mouse_genomes_project 7 44840217 44919901 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101383.1 MGP_CBAJ_G0039449.1 mouse_genomes_project 7 44861361 44915231 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0084448.1 MGP_CBAJ_G0032158.1 mouse_genomes_project 7 96890208 96895350 - MGP_CBAJ_P0084448 protein_coding protein_coding MGP_CBAJ_T0102123.1 MGP_CBAJ_G0040152.1 mouse_genomes_project 7 41566921 41575288 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0083527.1 MGP_CBAJ_G0031937.1 mouse_genomes_project 7 50947320 50969910 - MGP_CBAJ_P0083527 Tph1 protein_coding protein_coding MGP_CBAJ_T0083528.1 MGP_CBAJ_G0031937.1 mouse_genomes_project 7 50947351 50975119 - MGP_CBAJ_P0083528 Tph1 protein_coding protein_coding MGP_CBAJ_T0083529.1 MGP_CBAJ_G0031937.1 mouse_genomes_project 7 50947616 50967834 - MGP_CBAJ_P0083529 Tph1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083530.1 MGP_CBAJ_G0031937.1 mouse_genomes_project 7 50947616 50967821 - MGP_CBAJ_P0083530 Tph1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083531.1 MGP_CBAJ_G0031937.1 mouse_genomes_project 7 50952302 50953981 - Tph1 protein_coding retained_intron MGP_CBAJ_T0083532.1 MGP_CBAJ_G0031937.1 mouse_genomes_project 7 50959393 50963200 - Tph1 protein_coding retained_intron MGP_CBAJ_T0083533.1 MGP_CBAJ_G0031937.1 mouse_genomes_project 7 50962551 50964848 - Tph1 protein_coding retained_intron MGP_CBAJ_T0083534.1 MGP_CBAJ_G0031937.1 mouse_genomes_project 7 50962869 50969876 - MGP_CBAJ_P0083534 Tph1 protein_coding protein_coding MGP_CBAJ_T0008877.1 MGP_CBAJ_G0007148.1 mouse_genomes_project 7 110931898 110961263 - Gm10603 lincRNA lincRNA MGP_CBAJ_T0008878.1 MGP_CBAJ_G0007148.1 mouse_genomes_project 7 110946210 110954017 - Gm10603 lincRNA lincRNA MGP_CBAJ_T0008879.1 MGP_CBAJ_G0007148.1 mouse_genomes_project 7 110950344 110961268 - Gm10603 lincRNA lincRNA MGP_CBAJ_T0086764.1 MGP_CBAJ_G0032793.1 mouse_genomes_project 7 148559355 148581237 - Uros protein_coding retained_intron MGP_CBAJ_T0086765.1 MGP_CBAJ_G0032793.1 mouse_genomes_project 7 148559468 148581101 - MGP_CBAJ_P0086765 Uros protein_coding protein_coding MGP_CBAJ_T0086766.1 MGP_CBAJ_G0032793.1 mouse_genomes_project 7 148559468 148581212 - MGP_CBAJ_P0086766 Uros protein_coding protein_coding MGP_CBAJ_T0086767.1 MGP_CBAJ_G0032793.1 mouse_genomes_project 7 148559477 148581424 - MGP_CBAJ_P0086767 Uros protein_coding protein_coding MGP_CBAJ_T0086768.1 MGP_CBAJ_G0032793.1 mouse_genomes_project 7 148560073 148570164 - Uros protein_coding processed_transcript MGP_CBAJ_T0086769.1 MGP_CBAJ_G0032793.1 mouse_genomes_project 7 148565246 148581202 - MGP_CBAJ_P0086769 Uros protein_coding protein_coding MGP_CBAJ_T0086770.1 MGP_CBAJ_G0032793.1 mouse_genomes_project 7 148573950 148574728 - MGP_CBAJ_P0086770 Uros protein_coding protein_coding MGP_CBAJ_T0086771.1 MGP_CBAJ_G0032793.1 mouse_genomes_project 7 148574004 148581200 - MGP_CBAJ_P0086771 Uros protein_coding protein_coding MGP_CBAJ_T0086772.1 MGP_CBAJ_G0032793.1 mouse_genomes_project 7 148574006 148582215 - MGP_CBAJ_P0086772 Uros protein_coding protein_coding MGP_CBAJ_T0085247.1 MGP_CBAJ_G0032434.1 mouse_genomes_project 7 117157990 117193220 - MGP_CBAJ_P0085247 Dchs1 protein_coding protein_coding MGP_CBAJ_T0085248.1 MGP_CBAJ_G0032434.1 mouse_genomes_project 7 117157991 117193324 - MGP_CBAJ_P0085248 Dchs1 protein_coding protein_coding MGP_CBAJ_T0085249.1 MGP_CBAJ_G0032434.1 mouse_genomes_project 7 117161977 117162891 - Dchs1 protein_coding retained_intron MGP_CBAJ_T0085250.1 MGP_CBAJ_G0032434.1 mouse_genomes_project 7 117168464 117192294 - MGP_CBAJ_P0085250 Dchs1 protein_coding protein_coding MGP_CBAJ_T0015500.1 MGP_CBAJ_G0013612.1 mouse_genomes_project 7 16835330 16835797 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0081153.1 MGP_CBAJ_G0031306.1 mouse_genomes_project 7 10672855 10693020 - MGP_CBAJ_P0081153 protein_coding protein_coding MGP_CBAJ_T0015558.1 MGP_CBAJ_G0013670.1 mouse_genomes_project 7 44435745 44439127 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015452.1 MGP_CBAJ_G0013564.1 mouse_genomes_project 7 578631 578932 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0081307.1 MGP_CBAJ_G0031360.1 mouse_genomes_project 7 14987232 15023061 + MGP_CBAJ_P0081307 Slc8a2 protein_coding protein_coding MGP_CBAJ_T0085700.1 MGP_CBAJ_G0032586.1 mouse_genomes_project 7 132797484 132825202 + MGP_CBAJ_P0085700 Acsm4 protein_coding unknown_likely_coding MGP_CBAJ_T0085307.1 MGP_CBAJ_G0032478.1 mouse_genomes_project 7 119796964 119797909 - MGP_CBAJ_P0085307 Olfr478 protein_coding protein_coding MGP_CBAJ_T0008743.1 MGP_CBAJ_G0007056.1 mouse_genomes_project 7 39822626 39825833 - lincRNA lincRNA MGP_CBAJ_T0098172.1 MGP_CBAJ_G0036445.1 mouse_genomes_project 7 4186642 4186736 + Gm27675 sRNA sRNA MGP_CBAJ_T0085260.1 MGP_CBAJ_G0032439.1 mouse_genomes_project 7 118337429 118338377 - MGP_CBAJ_P0085260 Olfr694 protein_coding protein_coding MGP_CBAJ_T0085278.1 MGP_CBAJ_G0032456.1 mouse_genomes_project 7 118667049 118671889 - MGP_CBAJ_P0085278 Olfr711 protein_coding protein_coding MGP_CBAJ_T0008800.1 MGP_CBAJ_G0007095.1 mouse_genomes_project 7 78083171 78090280 + 6030442E23Rik lincRNA lincRNA MGP_CBAJ_T0085050.1 MGP_CBAJ_G0032345.1 mouse_genomes_project 7 114948769 114951877 - MGP_CBAJ_P0085050 protein_coding protein_coding MGP_CBAJ_T0102218.1 MGP_CBAJ_G0040247.1 mouse_genomes_project 7 117233021 118002000 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0084835.1 MGP_CBAJ_G0032251.1 mouse_genomes_project 7 111985637 112055866 + MGP_CBAJ_P0084835 Arap1 protein_coding protein_coding MGP_CBAJ_T0084836.1 MGP_CBAJ_G0032251.1 mouse_genomes_project 7 111998588 112010510 + MGP_CBAJ_P0084836 Arap1 protein_coding protein_coding MGP_CBAJ_T0084837.1 MGP_CBAJ_G0032251.1 mouse_genomes_project 7 111998800 112010384 + MGP_CBAJ_P0084837 Arap1 protein_coding protein_coding MGP_CBAJ_T0084838.1 MGP_CBAJ_G0032251.1 mouse_genomes_project 7 111999325 112010519 + MGP_CBAJ_P0084838 Arap1 protein_coding protein_coding MGP_CBAJ_T0084839.1 MGP_CBAJ_G0032251.1 mouse_genomes_project 7 112010347 112056433 + MGP_CBAJ_P0084839 Arap1 protein_coding protein_coding MGP_CBAJ_T0084840.1 MGP_CBAJ_G0032251.1 mouse_genomes_project 7 112015739 112023902 + MGP_CBAJ_P0084840 Arap1 protein_coding protein_coding MGP_CBAJ_T0084841.1 MGP_CBAJ_G0032251.1 mouse_genomes_project 7 112020202 112022969 + Arap1 protein_coding processed_transcript MGP_CBAJ_T0084842.1 MGP_CBAJ_G0032251.1 mouse_genomes_project 7 112021395 112023572 + MGP_CBAJ_P0084842 Arap1 protein_coding protein_coding MGP_CBAJ_T0084843.1 MGP_CBAJ_G0032251.1 mouse_genomes_project 7 112022772 112023820 + MGP_CBAJ_P0084843 Arap1 protein_coding protein_coding MGP_CBAJ_T0084844.1 MGP_CBAJ_G0032251.1 mouse_genomes_project 7 112022777 112024212 + MGP_CBAJ_P0084844 Arap1 protein_coding protein_coding MGP_CBAJ_T0084845.1 MGP_CBAJ_G0032251.1 mouse_genomes_project 7 112031763 112057132 + MGP_CBAJ_P0084845 Arap1 protein_coding protein_coding MGP_CBAJ_T0084846.1 MGP_CBAJ_G0032251.1 mouse_genomes_project 7 112031783 112057132 + MGP_CBAJ_P0084846 Arap1 protein_coding protein_coding MGP_CBAJ_T0084847.1 MGP_CBAJ_G0032251.1 mouse_genomes_project 7 112032025 112033498 + Arap1 protein_coding retained_intron MGP_CBAJ_T0084848.1 MGP_CBAJ_G0032251.1 mouse_genomes_project 7 112033215 112035727 + Arap1 protein_coding processed_transcript MGP_CBAJ_T0084849.1 MGP_CBAJ_G0032251.1 mouse_genomes_project 7 112035712 112036899 + Arap1 protein_coding processed_transcript MGP_CBAJ_T0084850.1 MGP_CBAJ_G0032251.1 mouse_genomes_project 7 112042251 112049763 + Arap1 protein_coding retained_intron MGP_CBAJ_T0084851.1 MGP_CBAJ_G0032251.1 mouse_genomes_project 7 112048322 112056224 + Arap1 protein_coding retained_intron MGP_CBAJ_T0100771.1 MGP_CBAJ_G0039026.1 mouse_genomes_project 7 137817641 137817770 + Gm25759 snoRNA snoRNA MGP_CBAJ_T0008919.1 MGP_CBAJ_G0007173.1 mouse_genomes_project 7 140779711 140791089 - lincRNA lincRNA MGP_CBAJ_T0083866.1 MGP_CBAJ_G0032019.1 mouse_genomes_project 7 72414351 72478051 + MGP_CBAJ_P0083866 Chsy1 protein_coding protein_coding MGP_CBAJ_T0102076.1 MGP_CBAJ_G0040106.1 mouse_genomes_project 7 12557678 12576135 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015707.1 MGP_CBAJ_G0013819.1 mouse_genomes_project 7 155247860 155248332 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0084917.1 MGP_CBAJ_G0032264.1 mouse_genomes_project 7 112773596 112832782 - MGP_CBAJ_P0084917 protein_coding protein_coding MGP_CBAJ_T0084918.1 MGP_CBAJ_G0032264.1 mouse_genomes_project 7 112773611 112833093 - MGP_CBAJ_P0084918 protein_coding protein_coding MGP_CBAJ_T0084919.1 MGP_CBAJ_G0032264.1 mouse_genomes_project 7 112774591 112828280 - MGP_CBAJ_P0084919 protein_coding protein_coding MGP_CBAJ_T0084920.1 MGP_CBAJ_G0032264.1 mouse_genomes_project 7 112774892 112780464 - protein_coding retained_intron MGP_CBAJ_T0084921.1 MGP_CBAJ_G0032264.1 mouse_genomes_project 7 112784818 112832741 - MGP_CBAJ_P0084921 protein_coding protein_coding MGP_CBAJ_T0084922.1 MGP_CBAJ_G0032264.1 mouse_genomes_project 7 112791089 112832782 - protein_coding processed_transcript MGP_CBAJ_T0084923.1 MGP_CBAJ_G0032264.1 mouse_genomes_project 7 112798136 112832668 - MGP_CBAJ_P0084923 protein_coding protein_coding MGP_CBAJ_T0081688.1 MGP_CBAJ_G0031485.1 mouse_genomes_project 7 23993681 24008622 + MGP_CBAJ_P0081688 Zfp112 protein_coding protein_coding MGP_CBAJ_T0081689.1 MGP_CBAJ_G0031485.1 mouse_genomes_project 7 23993681 24009081 + MGP_CBAJ_P0081689 Zfp112 protein_coding protein_coding MGP_CBAJ_T0081690.1 MGP_CBAJ_G0031485.1 mouse_genomes_project 7 23993717 23995810 + Zfp112 protein_coding retained_intron MGP_CBAJ_T0081691.1 MGP_CBAJ_G0031485.1 mouse_genomes_project 7 23993734 24014337 + MGP_CBAJ_P0081691 Zfp112 protein_coding unknown_likely_coding MGP_CBAJ_T0015698.1 MGP_CBAJ_G0013810.1 mouse_genomes_project 7 142652831 142653026 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0085053.1 MGP_CBAJ_G0032348.1 mouse_genomes_project 7 114983115 114984615 - MGP_CBAJ_P0085053 Hbb-y protein_coding protein_coding MGP_CBAJ_T0081789.1 MGP_CBAJ_G0031516.1 mouse_genomes_project 7 24948389 24955764 + MGP_CBAJ_P0081789 Rps19 protein_coding protein_coding MGP_CBAJ_T0081790.1 MGP_CBAJ_G0031516.1 mouse_genomes_project 7 24948651 24955764 + MGP_CBAJ_P0081790 Rps19 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081791.1 MGP_CBAJ_G0031516.1 mouse_genomes_project 7 24948653 24951778 + Rps19 protein_coding retained_intron MGP_CBAJ_T0081792.1 MGP_CBAJ_G0031516.1 mouse_genomes_project 7 24948654 24955760 + MGP_CBAJ_P0081792 Rps19 protein_coding protein_coding MGP_CBAJ_T0081793.1 MGP_CBAJ_G0031516.1 mouse_genomes_project 7 24948669 24954911 + MGP_CBAJ_P0081793 Rps19 protein_coding protein_coding MGP_CBAJ_T0081794.1 MGP_CBAJ_G0031516.1 mouse_genomes_project 7 24948732 24955764 + MGP_CBAJ_P0081794 Rps19 protein_coding protein_coding MGP_CBAJ_T0081795.1 MGP_CBAJ_G0031516.1 mouse_genomes_project 7 24948831 24954891 + MGP_CBAJ_P0081795 Rps19 protein_coding protein_coding MGP_CBAJ_T0081796.1 MGP_CBAJ_G0031516.1 mouse_genomes_project 7 24948935 24954933 + MGP_CBAJ_P0081796 Rps19 protein_coding protein_coding MGP_CBAJ_T0081797.1 MGP_CBAJ_G0031516.1 mouse_genomes_project 7 24952208 24955762 + Rps19 protein_coding retained_intron MGP_CBAJ_T0081798.1 MGP_CBAJ_G0031516.1 mouse_genomes_project 7 24954705 24955762 + Rps19 protein_coding processed_transcript MGP_CBAJ_T0082318.1 MGP_CBAJ_G0031643.1 mouse_genomes_project 7 30306672 30313417 - MGP_CBAJ_P0082318 Spred3 protein_coding unknown_likely_coding MGP_CBAJ_T0082319.1 MGP_CBAJ_G0031643.1 mouse_genomes_project 7 30311057 30314975 - Spred3 protein_coding retained_intron MGP_CBAJ_T0099523.1 MGP_CBAJ_G0037778.1 mouse_genomes_project 7 140507852 140507959 - Gm24596 snRNA snRNA MGP_CBAJ_T0082935.1 MGP_CBAJ_G0031774.1 mouse_genomes_project 7 40862533 40873445 - MGP_CBAJ_P0082935 Plekhf1 protein_coding protein_coding MGP_CBAJ_T0101390.1 MGP_CBAJ_G0039453.1 mouse_genomes_project 7 140648404 140657419 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0082493.1 MGP_CBAJ_G0031689.1 mouse_genomes_project 7 31828760 31840062 - MGP_CBAJ_P0082493 Aplp1 protein_coding protein_coding MGP_CBAJ_T0008728.1 MGP_CBAJ_G0007042.1 mouse_genomes_project 7 36648624 36660305 + Gm12784 lincRNA lincRNA MGP_CBAJ_T0008729.1 MGP_CBAJ_G0007042.1 mouse_genomes_project 7 36651358 36690562 + Gm12784 lincRNA lincRNA MGP_CBAJ_T0002208.1 MGP_CBAJ_G0002123.1 mouse_genomes_project 7 70689901 70690506 + TEC TEC MGP_CBAJ_T0011561.1 MGP_CBAJ_G0009699.1 mouse_genomes_project 7 82636537 82636860 + Gm24858 misc_RNA misc_RNA MGP_CBAJ_T0087311.1 MGP_CBAJ_G0032930.1 mouse_genomes_project 7 158383894 158391833 + Mrpl23 protein_coding processed_transcript MGP_CBAJ_T0087312.1 MGP_CBAJ_G0032930.1 mouse_genomes_project 7 158384107 158391843 + MGP_CBAJ_P0087312 Mrpl23 protein_coding protein_coding MGP_CBAJ_T0087313.1 MGP_CBAJ_G0032930.1 mouse_genomes_project 7 158385617 158388385 + Mrpl23 protein_coding retained_intron MGP_CBAJ_T0087314.1 MGP_CBAJ_G0032930.1 mouse_genomes_project 7 158387199 158389006 + Mrpl23 protein_coding retained_intron MGP_CBAJ_T0100773.1 MGP_CBAJ_G0039028.1 mouse_genomes_project 7 141657773 141657903 + Snora30 snoRNA snoRNA MGP_CBAJ_T0083202.1 MGP_CBAJ_G0031850.1 mouse_genomes_project 7 48839047 48853755 + MGP_CBAJ_P0083202 Il4i1 protein_coding protein_coding MGP_CBAJ_T0083203.1 MGP_CBAJ_G0031850.1 mouse_genomes_project 7 48839329 48863530 + MGP_CBAJ_P0083203 Il4i1 protein_coding protein_coding MGP_CBAJ_T0083204.1 MGP_CBAJ_G0031850.1 mouse_genomes_project 7 48839346 48855896 + Il4i1 protein_coding processed_transcript MGP_CBAJ_T0083205.1 MGP_CBAJ_G0031850.1 mouse_genomes_project 7 48859012 48863535 + MGP_CBAJ_P0083205 Il4i1 protein_coding protein_coding MGP_CBAJ_T0083206.1 MGP_CBAJ_G0031850.1 mouse_genomes_project 7 48859016 48861022 + Il4i1 protein_coding retained_intron MGP_CBAJ_T0083207.1 MGP_CBAJ_G0031850.1 mouse_genomes_project 7 48861416 48862507 + Il4i1 protein_coding retained_intron MGP_CBAJ_T0083208.1 MGP_CBAJ_G0031850.1 mouse_genomes_project 7 48861923 48862494 + MGP_CBAJ_P0083208 Il4i1 protein_coding protein_coding MGP_CBAJ_T0102140.1 MGP_CBAJ_G0040169.1 mouse_genomes_project 7 47961902 47962119 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0008725.1 MGP_CBAJ_G0007039.1 mouse_genomes_project 7 36288285 36295008 + Gm26762 lincRNA lincRNA MGP_CBAJ_T0097834.1 MGP_CBAJ_G0036107.1 mouse_genomes_project 7 102686368 102688200 + pseudogene pseudogene MGP_CBAJ_T0015668.1 MGP_CBAJ_G0013780.1 mouse_genomes_project 7 122498990 122499556 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097830.1 MGP_CBAJ_G0036103.1 mouse_genomes_project 7 16776405 16776868 + pseudogene pseudogene MGP_CBAJ_T0083612.1 MGP_CBAJ_G0031966.1 mouse_genomes_project 7 53556615 53625249 + Nav2 protein_coding processed_transcript MGP_CBAJ_T0083613.1 MGP_CBAJ_G0031966.1 mouse_genomes_project 7 53620525 53632376 + Nav2 protein_coding retained_intron MGP_CBAJ_T0083614.1 MGP_CBAJ_G0031966.1 mouse_genomes_project 7 53620549 54330767 + MGP_CBAJ_P0083614 Nav2 protein_coding protein_coding MGP_CBAJ_T0083615.1 MGP_CBAJ_G0031966.1 mouse_genomes_project 7 53938684 54115806 + Nav2 protein_coding retained_intron MGP_CBAJ_T0083616.1 MGP_CBAJ_G0031966.1 mouse_genomes_project 7 53938684 54337225 + MGP_CBAJ_P0083616 Nav2 protein_coding protein_coding MGP_CBAJ_T0083617.1 MGP_CBAJ_G0031966.1 mouse_genomes_project 7 53939339 54337228 + MGP_CBAJ_P0083617 Nav2 protein_coding protein_coding MGP_CBAJ_T0083618.1 MGP_CBAJ_G0031966.1 mouse_genomes_project 7 53939340 54207903 + MGP_CBAJ_P0083618 Nav2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083619.1 MGP_CBAJ_G0031966.1 mouse_genomes_project 7 53939463 54330767 + MGP_CBAJ_P0083619 Nav2 protein_coding unknown_likely_coding MGP_CBAJ_T0083620.1 MGP_CBAJ_G0031966.1 mouse_genomes_project 7 54001491 54117569 + Nav2 protein_coding retained_intron MGP_CBAJ_T0083621.1 MGP_CBAJ_G0031966.1 mouse_genomes_project 7 54001605 54143875 + Nav2 protein_coding processed_transcript MGP_CBAJ_T0083622.1 MGP_CBAJ_G0031966.1 mouse_genomes_project 7 54001607 54003271 + Nav2 protein_coding retained_intron MGP_CBAJ_T0083623.1 MGP_CBAJ_G0031966.1 mouse_genomes_project 7 54071190 54160682 + Nav2 protein_coding retained_intron MGP_CBAJ_T0083624.1 MGP_CBAJ_G0031966.1 mouse_genomes_project 7 54156835 54174820 + Nav2 protein_coding processed_transcript MGP_CBAJ_T0083625.1 MGP_CBAJ_G0031966.1 mouse_genomes_project 7 54266630 54275429 + MGP_CBAJ_P0083625 Nav2 protein_coding protein_coding MGP_CBAJ_T0083626.1 MGP_CBAJ_G0031966.1 mouse_genomes_project 7 54272330 54275169 + Nav2 protein_coding retained_intron MGP_CBAJ_T0083627.1 MGP_CBAJ_G0031966.1 mouse_genomes_project 7 54296755 54298221 + Nav2 protein_coding retained_intron MGP_CBAJ_T0083628.1 MGP_CBAJ_G0031966.1 mouse_genomes_project 7 54306859 54308443 + Nav2 protein_coding retained_intron MGP_CBAJ_T0083629.1 MGP_CBAJ_G0031966.1 mouse_genomes_project 7 54309032 54311669 + Nav2 protein_coding retained_intron MGP_CBAJ_T0086455.1 MGP_CBAJ_G0032732.1 mouse_genomes_project 7 142088221 142097448 - MGP_CBAJ_P0086455 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084474.1 MGP_CBAJ_G0032167.1 mouse_genomes_project 7 99101560 99130099 - MGP_CBAJ_P0084474 l7Rn6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084475.1 MGP_CBAJ_G0032167.1 mouse_genomes_project 7 99101777 99130117 - MGP_CBAJ_P0084475 l7Rn6 protein_coding protein_coding MGP_CBAJ_T0084476.1 MGP_CBAJ_G0032167.1 mouse_genomes_project 7 99101810 99130031 - MGP_CBAJ_P0084476 l7Rn6 protein_coding protein_coding MGP_CBAJ_T0084477.1 MGP_CBAJ_G0032167.1 mouse_genomes_project 7 99102429 99108745 - l7Rn6 protein_coding retained_intron MGP_CBAJ_T0084478.1 MGP_CBAJ_G0032167.1 mouse_genomes_project 7 99117396 99130198 - l7Rn6 protein_coding processed_transcript MGP_CBAJ_T0082189.1 MGP_CBAJ_G0031614.1 mouse_genomes_project 7 29315961 29321982 + MGP_CBAJ_P0082189 Paf1 protein_coding protein_coding MGP_CBAJ_T0082190.1 MGP_CBAJ_G0031614.1 mouse_genomes_project 7 29315972 29317058 + Paf1 protein_coding retained_intron MGP_CBAJ_T0082191.1 MGP_CBAJ_G0031614.1 mouse_genomes_project 7 29316051 29321977 + Paf1 protein_coding retained_intron MGP_CBAJ_T0082192.1 MGP_CBAJ_G0031614.1 mouse_genomes_project 7 29316171 29318788 + Paf1 protein_coding retained_intron MGP_CBAJ_T0082193.1 MGP_CBAJ_G0031614.1 mouse_genomes_project 7 29316468 29318706 + Paf1 protein_coding retained_intron MGP_CBAJ_T0082194.1 MGP_CBAJ_G0031614.1 mouse_genomes_project 7 29317773 29318810 + Paf1 protein_coding retained_intron MGP_CBAJ_T0082195.1 MGP_CBAJ_G0031614.1 mouse_genomes_project 7 29318435 29319090 + Paf1 protein_coding retained_intron MGP_CBAJ_T0082196.1 MGP_CBAJ_G0031614.1 mouse_genomes_project 7 29318835 29321337 + Paf1 protein_coding retained_intron MGP_CBAJ_T0082197.1 MGP_CBAJ_G0031614.1 mouse_genomes_project 7 29321027 29321654 + Paf1 protein_coding processed_transcript MGP_CBAJ_T0002283.1 MGP_CBAJ_G0002197.1 mouse_genomes_project 7 159214510 159218430 + TEC TEC MGP_CBAJ_T0005230.1 MGP_CBAJ_G0004431.1 mouse_genomes_project 7 158523836 158536614 + Igf2os antisense antisense MGP_CBAJ_T0005231.1 MGP_CBAJ_G0004431.1 mouse_genomes_project 7 158523855 158524848 + Igf2os antisense antisense MGP_CBAJ_T0005232.1 MGP_CBAJ_G0004431.1 mouse_genomes_project 7 158531577 158532532 + Igf2os antisense antisense MGP_CBAJ_T0102182.1 MGP_CBAJ_G0040211.1 mouse_genomes_project 7 94523910 94524527 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010733.1 MGP_CBAJ_G0008871.1 mouse_genomes_project 7 31207631 31207690 + Mir7668 miRNA miRNA MGP_CBAJ_T0100730.1 MGP_CBAJ_G0038985.1 mouse_genomes_project 7 49190007 49190091 - Snord33 snoRNA snoRNA MGP_CBAJ_T0002245.1 MGP_CBAJ_G0002159.1 mouse_genomes_project 7 88240553 88242843 + TEC TEC MGP_CBAJ_T0018089.1 MGP_CBAJ_G0015407.1 mouse_genomes_project 7 48166870 48167315 + processed_transcript lincRNA MGP_CBAJ_T0018090.1 MGP_CBAJ_G0015407.1 mouse_genomes_project 7 48166953 48167312 + processed_transcript retained_intron MGP_CBAJ_T0018091.1 MGP_CBAJ_G0015407.1 mouse_genomes_project 7 48166984 48167313 + processed_transcript retained_intron MGP_CBAJ_T0085057.1 MGP_CBAJ_G0032352.1 mouse_genomes_project 7 115074288 115075248 + MGP_CBAJ_P0085057 Olfr631 protein_coding protein_coding MGP_CBAJ_T0085120.1 MGP_CBAJ_G0032388.1 mouse_genomes_project 7 115776709 115779236 + MGP_CBAJ_P0085120 protein_coding protein_coding MGP_CBAJ_T0085891.1 MGP_CBAJ_G0032632.1 mouse_genomes_project 7 136853057 136945292 - MGP_CBAJ_P0085891 Arhgap17 protein_coding protein_coding MGP_CBAJ_T0085892.1 MGP_CBAJ_G0032632.1 mouse_genomes_project 7 136853110 136945327 - MGP_CBAJ_P0085892 Arhgap17 protein_coding protein_coding MGP_CBAJ_T0085893.1 MGP_CBAJ_G0032632.1 mouse_genomes_project 7 136853110 136945327 - MGP_CBAJ_P0085893 Arhgap17 protein_coding protein_coding MGP_CBAJ_T0085894.1 MGP_CBAJ_G0032632.1 mouse_genomes_project 7 136853114 136945319 - MGP_CBAJ_P0085894 Arhgap17 protein_coding protein_coding MGP_CBAJ_T0085895.1 MGP_CBAJ_G0032632.1 mouse_genomes_project 7 136853119 136945344 - MGP_CBAJ_P0085895 Arhgap17 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085896.1 MGP_CBAJ_G0032632.1 mouse_genomes_project 7 136853224 136945326 - MGP_CBAJ_P0085896 Arhgap17 protein_coding protein_coding MGP_CBAJ_T0085897.1 MGP_CBAJ_G0032632.1 mouse_genomes_project 7 136856776 136860081 - Arhgap17 protein_coding retained_intron MGP_CBAJ_T0085898.1 MGP_CBAJ_G0032632.1 mouse_genomes_project 7 136860825 136870430 - Arhgap17 protein_coding retained_intron MGP_CBAJ_T0085899.1 MGP_CBAJ_G0032632.1 mouse_genomes_project 7 136869118 136945356 - Arhgap17 protein_coding retained_intron MGP_CBAJ_T0085900.1 MGP_CBAJ_G0032632.1 mouse_genomes_project 7 136895387 136945356 - MGP_CBAJ_P0085900 Arhgap17 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085901.1 MGP_CBAJ_G0032632.1 mouse_genomes_project 7 136944217 136945317 - Arhgap17 protein_coding retained_intron MGP_CBAJ_T0083413.1 MGP_CBAJ_G0031905.1 mouse_genomes_project 7 49779065 49784327 + MGP_CBAJ_P0083413 Izumo1 protein_coding protein_coding MGP_CBAJ_T0083414.1 MGP_CBAJ_G0031905.1 mouse_genomes_project 7 49781692 49785908 + Izumo1 protein_coding retained_intron MGP_CBAJ_T0102105.1 MGP_CBAJ_G0040134.1 mouse_genomes_project 7 26268920 26299377 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081602.1 MGP_CBAJ_G0031451.1 mouse_genomes_project 7 19151384 19177653 - MGP_CBAJ_P0081602 Clasrp protein_coding protein_coding MGP_CBAJ_T0010710.1 MGP_CBAJ_G0008848.1 mouse_genomes_project 7 2375936 2376014 - Gm26217 miRNA miRNA MGP_CBAJ_T0084321.1 MGP_CBAJ_G0032103.1 mouse_genomes_project 7 89847909 89977247 - MGP_CBAJ_P0084321 Homer2 protein_coding protein_coding MGP_CBAJ_T0084322.1 MGP_CBAJ_G0032103.1 mouse_genomes_project 7 89847909 89963188 - MGP_CBAJ_P0084322 Homer2 protein_coding protein_coding MGP_CBAJ_T0084323.1 MGP_CBAJ_G0032103.1 mouse_genomes_project 7 89857703 89977085 - MGP_CBAJ_P0084323 Homer2 protein_coding unknown_likely_coding MGP_CBAJ_T0008757.1 MGP_CBAJ_G0007064.1 mouse_genomes_project 7 43644089 43652614 + 4933402C06Rik lincRNA lincRNA MGP_CBAJ_T0008758.1 MGP_CBAJ_G0007064.1 mouse_genomes_project 7 43644089 43663522 + 4933402C06Rik lincRNA lincRNA MGP_CBAJ_T0085990.1 MGP_CBAJ_G0032649.1 mouse_genomes_project 7 140342934 140349353 - Cd19 protein_coding retained_intron MGP_CBAJ_T0085991.1 MGP_CBAJ_G0032649.1 mouse_genomes_project 7 140342935 140349374 - MGP_CBAJ_P0085991 Cd19 protein_coding protein_coding MGP_CBAJ_T0085992.1 MGP_CBAJ_G0032649.1 mouse_genomes_project 7 140342935 140349357 - MGP_CBAJ_P0085992 Cd19 protein_coding protein_coding MGP_CBAJ_T0085993.1 MGP_CBAJ_G0032649.1 mouse_genomes_project 7 140343846 140344281 - Cd19 protein_coding retained_intron MGP_CBAJ_T0085994.1 MGP_CBAJ_G0032649.1 mouse_genomes_project 7 140348146 140349035 - Cd19 protein_coding retained_intron MGP_CBAJ_T0008826.1 MGP_CBAJ_G0007118.1 mouse_genomes_project 7 82150272 82184814 - 0610006L08Rik lincRNA lincRNA MGP_CBAJ_T0008827.1 MGP_CBAJ_G0007118.1 mouse_genomes_project 7 82155065 82184811 - 0610006L08Rik lincRNA lincRNA MGP_CBAJ_T0084550.1 MGP_CBAJ_G0032186.1 mouse_genomes_project 7 107162925 107395446 + MGP_CBAJ_P0084550 Gab2 protein_coding protein_coding MGP_CBAJ_T0084551.1 MGP_CBAJ_G0032186.1 mouse_genomes_project 7 107163111 107391526 + MGP_CBAJ_P0084551 Gab2 protein_coding protein_coding MGP_CBAJ_T0102059.1 MGP_CBAJ_G0040089.1 mouse_genomes_project 7 9736432 9736610 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0018078.1 MGP_CBAJ_G0015400.1 mouse_genomes_project 7 28421038 28422672 - Gm44685 processed_transcript processed_transcript MGP_CBAJ_T0008846.1 MGP_CBAJ_G0007129.1 mouse_genomes_project 7 88338375 88340256 - 6330403N20Rik lincRNA lincRNA MGP_CBAJ_T0102175.1 MGP_CBAJ_G0040204.1 mouse_genomes_project 7 94017073 94055812 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0102092.1 MGP_CBAJ_G0040122.1 mouse_genomes_project 7 13391265 13391564 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0086095.1 MGP_CBAJ_G0032666.1 mouse_genomes_project 7 140735784 140741023 + MGP_CBAJ_P0086095 Mapk3 protein_coding protein_coding MGP_CBAJ_T0086096.1 MGP_CBAJ_G0032666.1 mouse_genomes_project 7 140735829 140741996 + MGP_CBAJ_P0086096 Mapk3 protein_coding protein_coding MGP_CBAJ_T0086097.1 MGP_CBAJ_G0032666.1 mouse_genomes_project 7 140735834 140741022 + MGP_CBAJ_P0086097 Mapk3 protein_coding protein_coding MGP_CBAJ_T0086098.1 MGP_CBAJ_G0032666.1 mouse_genomes_project 7 140735837 140737185 + Mapk3 protein_coding retained_intron MGP_CBAJ_T0086099.1 MGP_CBAJ_G0032666.1 mouse_genomes_project 7 140736011 140739337 + Mapk3 protein_coding processed_transcript MGP_CBAJ_T0086100.1 MGP_CBAJ_G0032666.1 mouse_genomes_project 7 140736926 140740750 + MGP_CBAJ_P0086100 Mapk3 protein_coding protein_coding MGP_CBAJ_T0086101.1 MGP_CBAJ_G0032666.1 mouse_genomes_project 7 140739454 140740538 + Mapk3 protein_coding retained_intron MGP_CBAJ_T0081317.1 MGP_CBAJ_G0031362.1 mouse_genomes_project 7 15070760 15077573 - Dhx34 protein_coding retained_intron MGP_CBAJ_T0081318.1 MGP_CBAJ_G0031362.1 mouse_genomes_project 7 15070760 15098887 - MGP_CBAJ_P0081318 Dhx34 protein_coding protein_coding MGP_CBAJ_T0081319.1 MGP_CBAJ_G0031362.1 mouse_genomes_project 7 15070834 15098882 - MGP_CBAJ_P0081319 Dhx34 protein_coding protein_coding MGP_CBAJ_T0081320.1 MGP_CBAJ_G0031362.1 mouse_genomes_project 7 15070834 15098843 - MGP_CBAJ_P0081320 Dhx34 protein_coding protein_coding MGP_CBAJ_T0081321.1 MGP_CBAJ_G0031362.1 mouse_genomes_project 7 15070834 15098843 - MGP_CBAJ_P0081321 Dhx34 protein_coding protein_coding MGP_CBAJ_T0081322.1 MGP_CBAJ_G0031362.1 mouse_genomes_project 7 15070837 15098843 - MGP_CBAJ_P0081322 Dhx34 protein_coding protein_coding MGP_CBAJ_T0081323.1 MGP_CBAJ_G0031362.1 mouse_genomes_project 7 15079359 15086800 - Dhx34 protein_coding processed_transcript MGP_CBAJ_T0087380.1 MGP_CBAJ_G0032943.1 mouse_genomes_project 7 159401144 159403725 + Slc22a18 protein_coding processed_transcript MGP_CBAJ_T0087381.1 MGP_CBAJ_G0032943.1 mouse_genomes_project 7 159401159 159427336 + MGP_CBAJ_P0087381 Slc22a18 protein_coding protein_coding MGP_CBAJ_T0087382.1 MGP_CBAJ_G0032943.1 mouse_genomes_project 7 159401191 159425053 + MGP_CBAJ_P0087382 Slc22a18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087383.1 MGP_CBAJ_G0032943.1 mouse_genomes_project 7 159401203 159427336 + MGP_CBAJ_P0087383 Slc22a18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087384.1 MGP_CBAJ_G0032943.1 mouse_genomes_project 7 159401228 159425054 + MGP_CBAJ_P0087384 Slc22a18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087385.1 MGP_CBAJ_G0032943.1 mouse_genomes_project 7 159402522 159427327 + MGP_CBAJ_P0087385 Slc22a18 protein_coding protein_coding MGP_CBAJ_T0082866.1 MGP_CBAJ_G0031763.1 mouse_genomes_project 7 37805705 37814825 - MGP_CBAJ_P0082866 Nudt19 protein_coding protein_coding MGP_CBAJ_T0082867.1 MGP_CBAJ_G0031763.1 mouse_genomes_project 7 37806041 37813715 - Nudt19 protein_coding processed_transcript MGP_CBAJ_T0082868.1 MGP_CBAJ_G0031763.1 mouse_genomes_project 7 37806496 37810564 - Nudt19 protein_coding retained_intron MGP_CBAJ_T0085329.1 MGP_CBAJ_G0032500.1 mouse_genomes_project 7 120653029 120653959 + MGP_CBAJ_P0085329 Olfr513 protein_coding protein_coding MGP_CBAJ_T0081283.1 MGP_CBAJ_G0031352.1 mouse_genomes_project 7 14724537 14726910 + MGP_CBAJ_P0081283 protein_coding protein_coding MGP_CBAJ_T0082488.1 MGP_CBAJ_G0031685.1 mouse_genomes_project 7 31751268 31758523 - MGP_CBAJ_P0082488 Lrfn3 protein_coding protein_coding MGP_CBAJ_T0002217.1 MGP_CBAJ_G0002132.1 mouse_genomes_project 7 80984227 80987323 - TEC TEC MGP_CBAJ_T0002218.1 MGP_CBAJ_G0002132.1 mouse_genomes_project 7 80985191 80987216 - TEC TEC MGP_CBAJ_T0086500.1 MGP_CBAJ_G0032740.1 mouse_genomes_project 7 142227137 142234222 + MGP_CBAJ_P0086500 Trim72 protein_coding protein_coding MGP_CBAJ_T0086501.1 MGP_CBAJ_G0032740.1 mouse_genomes_project 7 142227566 142233865 + MGP_CBAJ_P0086501 Trim72 protein_coding protein_coding MGP_CBAJ_T0083578.1 MGP_CBAJ_G0031946.1 mouse_genomes_project 7 51268574 51309350 - MGP_CBAJ_P0083578 Uevld protein_coding protein_coding MGP_CBAJ_T0084419.1 MGP_CBAJ_G0032140.1 mouse_genomes_project 7 95172334 95173294 - MGP_CBAJ_P0084419 Olfr305 protein_coding protein_coding MGP_CBAJ_T0082779.1 MGP_CBAJ_G0031747.1 mouse_genomes_project 7 36303693 36354986 - MGP_CBAJ_P0082779 4931406P16Rik protein_coding protein_coding MGP_CBAJ_T0082780.1 MGP_CBAJ_G0031747.1 mouse_genomes_project 7 36303885 36313363 - MGP_CBAJ_P0082780 4931406P16Rik protein_coding protein_coding MGP_CBAJ_T0082781.1 MGP_CBAJ_G0031747.1 mouse_genomes_project 7 36304886 36313174 - 4931406P16Rik protein_coding retained_intron MGP_CBAJ_T0082783.1 MGP_CBAJ_G0031747.1 mouse_genomes_project 7 36324002 36327180 - 4931406P16Rik protein_coding retained_intron MGP_CBAJ_T0082784.1 MGP_CBAJ_G0031747.1 mouse_genomes_project 7 36353747 36383494 - 4931406P16Rik protein_coding retained_intron MGP_CBAJ_T0082785.1 MGP_CBAJ_G0031747.1 mouse_genomes_project 7 36355266 36383489 - 4931406P16Rik protein_coding processed_transcript MGP_CBAJ_T0082786.1 MGP_CBAJ_G0031747.1 mouse_genomes_project 7 36355352 36375456 - 4931406P16Rik protein_coding processed_transcript MGP_CBAJ_T0082787.1 MGP_CBAJ_G0031747.1 mouse_genomes_project 7 36382010 36383452 - 4931406P16Rik protein_coding processed_transcript MGP_CBAJ_T0085033.1 MGP_CBAJ_G0032328.1 mouse_genomes_project 7 114599405 114605467 + MGP_CBAJ_P0085033 Olfr613 protein_coding protein_coding MGP_CBAJ_T0085265.1 MGP_CBAJ_G0032444.1 mouse_genomes_project 7 118479140 118480091 - MGP_CBAJ_P0085265 Olfr700 protein_coding protein_coding MGP_CBAJ_T0015533.1 MGP_CBAJ_G0013645.1 mouse_genomes_project 7 35160850 35161857 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0082149.1 MGP_CBAJ_G0031601.1 mouse_genomes_project 7 28997459 29044929 + MGP_CBAJ_P0082149 9530053A07Rik protein_coding protein_coding MGP_CBAJ_T0082150.1 MGP_CBAJ_G0031601.1 mouse_genomes_project 7 28997809 29019338 + 9530053A07Rik protein_coding retained_intron MGP_CBAJ_T0082151.1 MGP_CBAJ_G0031601.1 mouse_genomes_project 7 28997809 29017009 + 9530053A07Rik protein_coding retained_intron MGP_CBAJ_T0082152.1 MGP_CBAJ_G0031601.1 mouse_genomes_project 7 28997809 29044913 + MGP_CBAJ_P0082152 9530053A07Rik protein_coding protein_coding MGP_CBAJ_T0015553.1 MGP_CBAJ_G0013665.1 mouse_genomes_project 7 44422175 44423667 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097831.1 MGP_CBAJ_G0036104.1 mouse_genomes_project 7 68063053 68067747 - pseudogene pseudogene MGP_CBAJ_T0082972.1 MGP_CBAJ_G0031788.1 mouse_genomes_project 7 45552567 45596785 + MGP_CBAJ_P0082972 Vmn2r61 protein_coding protein_coding MGP_CBAJ_T0082973.1 MGP_CBAJ_G0031788.1 mouse_genomes_project 7 45558543 45568595 + Vmn2r61 protein_coding processed_transcript MGP_CBAJ_T0101388.1 MGP_CBAJ_G0039452.1 mouse_genomes_project 7 115541447 115543902 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101389.1 MGP_CBAJ_G0039452.1 mouse_genomes_project 7 115542140 115543381 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0008762.1 MGP_CBAJ_G0007068.1 mouse_genomes_project 7 47174224 47179477 - Gm2511 lincRNA lincRNA MGP_CBAJ_T0008763.1 MGP_CBAJ_G0007068.1 mouse_genomes_project 7 47174227 47182129 - Gm2511 lincRNA lincRNA MGP_CBAJ_T0008764.1 MGP_CBAJ_G0007068.1 mouse_genomes_project 7 47178627 47181706 - Gm2511 lincRNA lincRNA MGP_CBAJ_T0081785.1 MGP_CBAJ_G0031513.1 mouse_genomes_project 7 24820185 24825693 + MGP_CBAJ_P0081785 protein_coding protein_coding MGP_CBAJ_T0099481.1 MGP_CBAJ_G0037736.1 mouse_genomes_project 7 28978541 28978647 + Gm24356 snRNA snRNA MGP_CBAJ_T0082739.1 MGP_CBAJ_G0031734.1 mouse_genomes_project 7 32834943 32836246 - MGP_CBAJ_P0082739 Scgb1b2 protein_coding protein_coding MGP_CBAJ_T0102180.1 MGP_CBAJ_G0040209.1 mouse_genomes_project 7 94283880 94284787 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099528.1 MGP_CBAJ_G0037783.1 mouse_genomes_project 7 143110341 143110443 + Gm23783 snRNA snRNA MGP_CBAJ_T0002185.1 MGP_CBAJ_G0002100.1 mouse_genomes_project 7 47383909 47384362 + TEC TEC MGP_CBAJ_T0084715.1 MGP_CBAJ_G0032226.1 mouse_genomes_project 7 110292503 110362436 + MGP_CBAJ_P0084715 Xrra1 protein_coding protein_coding MGP_CBAJ_T0081347.1 MGP_CBAJ_G0031370.1 mouse_genomes_project 7 15378835 15381552 + MGP_CBAJ_P0081347 Tmem160 protein_coding protein_coding MGP_CBAJ_T0083845.1 MGP_CBAJ_G0032015.1 mouse_genomes_project 7 72147330 72244374 + MGP_CBAJ_P0083845 Pcsk6 protein_coding protein_coding MGP_CBAJ_T0083846.1 MGP_CBAJ_G0032015.1 mouse_genomes_project 7 72150647 72347854 + MGP_CBAJ_P0083846 Pcsk6 protein_coding protein_coding MGP_CBAJ_T0083847.1 MGP_CBAJ_G0032015.1 mouse_genomes_project 7 72150650 72347906 + MGP_CBAJ_P0083847 Pcsk6 protein_coding protein_coding MGP_CBAJ_T0083848.1 MGP_CBAJ_G0032015.1 mouse_genomes_project 7 72150939 72347860 + MGP_CBAJ_P0083848 Pcsk6 protein_coding protein_coding MGP_CBAJ_T0083849.1 MGP_CBAJ_G0032015.1 mouse_genomes_project 7 72244401 72254576 + Pcsk6 protein_coding retained_intron MGP_CBAJ_T0083850.1 MGP_CBAJ_G0032015.1 mouse_genomes_project 7 72335711 72341048 + Pcsk6 protein_coding retained_intron MGP_CBAJ_T0080942.1 MGP_CBAJ_G0031212.1 mouse_genomes_project 7 1708124 1767425 - MGP_CBAJ_P0080942 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080943.1 MGP_CBAJ_G0031212.1 mouse_genomes_project 7 1708465 1768325 - MGP_CBAJ_P0080943 protein_coding protein_coding MGP_CBAJ_T0080944.1 MGP_CBAJ_G0031212.1 mouse_genomes_project 7 1711879 1727928 - protein_coding retained_intron MGP_CBAJ_T0080945.1 MGP_CBAJ_G0031212.1 mouse_genomes_project 7 1734931 1767423 - protein_coding processed_transcript MGP_CBAJ_T0086988.1 MGP_CBAJ_G0032867.1 mouse_genomes_project 7 156486672 156508445 + MGP_CBAJ_P0086988 Psmd13 protein_coding protein_coding MGP_CBAJ_T0086989.1 MGP_CBAJ_G0032867.1 mouse_genomes_project 7 156487118 156507715 + Psmd13 protein_coding retained_intron MGP_CBAJ_T0086990.1 MGP_CBAJ_G0032867.1 mouse_genomes_project 7 156487133 156491970 + Psmd13 protein_coding processed_transcript MGP_CBAJ_T0086991.1 MGP_CBAJ_G0032867.1 mouse_genomes_project 7 156487142 156491568 + Psmd13 protein_coding processed_transcript MGP_CBAJ_T0086992.1 MGP_CBAJ_G0032867.1 mouse_genomes_project 7 156487156 156494424 + Psmd13 protein_coding processed_transcript MGP_CBAJ_T0086993.1 MGP_CBAJ_G0032867.1 mouse_genomes_project 7 156487171 156491883 + Psmd13 protein_coding retained_intron MGP_CBAJ_T0086994.1 MGP_CBAJ_G0032867.1 mouse_genomes_project 7 156487176 156508091 + MGP_CBAJ_P0086994 Psmd13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086995.1 MGP_CBAJ_G0032867.1 mouse_genomes_project 7 156487176 156508091 + MGP_CBAJ_P0086995 Psmd13 protein_coding protein_coding MGP_CBAJ_T0086996.1 MGP_CBAJ_G0032867.1 mouse_genomes_project 7 156487176 156508036 + MGP_CBAJ_P0086996 Psmd13 protein_coding protein_coding MGP_CBAJ_T0086997.1 MGP_CBAJ_G0032867.1 mouse_genomes_project 7 156488204 156491136 + Psmd13 protein_coding processed_transcript MGP_CBAJ_T0086998.1 MGP_CBAJ_G0032867.1 mouse_genomes_project 7 156494104 156508198 + MGP_CBAJ_P0086998 Psmd13 protein_coding protein_coding MGP_CBAJ_T0086999.1 MGP_CBAJ_G0032867.1 mouse_genomes_project 7 156495093 156507643 + Psmd13 protein_coding retained_intron MGP_CBAJ_T0087000.1 MGP_CBAJ_G0032867.1 mouse_genomes_project 7 156500577 156508446 + MGP_CBAJ_P0087000 Psmd13 protein_coding protein_coding MGP_CBAJ_T0010717.1 MGP_CBAJ_G0008855.1 mouse_genomes_project 7 18575342 18575407 + Mir3100 miRNA miRNA MGP_CBAJ_T0015569.1 MGP_CBAJ_G0013681.1 mouse_genomes_project 7 46214803 46216740 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0082521.1 MGP_CBAJ_G0031696.1 mouse_genomes_project 7 31971943 31976149 - MGP_CBAJ_P0082521 Lin37 protein_coding protein_coding MGP_CBAJ_T0082522.1 MGP_CBAJ_G0031696.1 mouse_genomes_project 7 31971946 31972524 - Lin37 protein_coding retained_intron MGP_CBAJ_T0082523.1 MGP_CBAJ_G0031696.1 mouse_genomes_project 7 31971947 31976341 - MGP_CBAJ_P0082523 Lin37 protein_coding protein_coding MGP_CBAJ_T0082524.1 MGP_CBAJ_G0031696.1 mouse_genomes_project 7 31972362 31976162 - MGP_CBAJ_P0082524 Lin37 protein_coding protein_coding MGP_CBAJ_T0082525.1 MGP_CBAJ_G0031696.1 mouse_genomes_project 7 31973595 31976142 - Lin37 protein_coding processed_transcript MGP_CBAJ_T0083633.1 MGP_CBAJ_G0031969.1 mouse_genomes_project 7 54548920 54635581 + MGP_CBAJ_P0083633 Prmt3 protein_coding protein_coding MGP_CBAJ_T0083634.1 MGP_CBAJ_G0031969.1 mouse_genomes_project 7 54548920 54555339 + MGP_CBAJ_P0083634 Prmt3 protein_coding protein_coding MGP_CBAJ_T0083635.1 MGP_CBAJ_G0031969.1 mouse_genomes_project 7 54549011 54554996 + Prmt3 protein_coding processed_transcript MGP_CBAJ_T0083636.1 MGP_CBAJ_G0031969.1 mouse_genomes_project 7 54549011 54600316 + MGP_CBAJ_P0083636 Prmt3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083637.1 MGP_CBAJ_G0031969.1 mouse_genomes_project 7 54549013 54553469 + Prmt3 protein_coding processed_transcript MGP_CBAJ_T0083638.1 MGP_CBAJ_G0031969.1 mouse_genomes_project 7 54549118 54560148 + Prmt3 protein_coding processed_transcript MGP_CBAJ_T0083639.1 MGP_CBAJ_G0031969.1 mouse_genomes_project 7 54552709 54560178 + MGP_CBAJ_P0083639 Prmt3 protein_coding protein_coding MGP_CBAJ_T0083640.1 MGP_CBAJ_G0031969.1 mouse_genomes_project 7 54571900 54600512 + MGP_CBAJ_P0083640 Prmt3 protein_coding protein_coding MGP_CBAJ_T0102199.1 MGP_CBAJ_G0040228.1 mouse_genomes_project 7 114113888 114114830 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0100775.1 MGP_CBAJ_G0039030.1 mouse_genomes_project 7 157081450 157081580 - Gm25725 snoRNA snoRNA MGP_CBAJ_T0086811.1 MGP_CBAJ_G0032806.1 mouse_genomes_project 7 150759446 150787910 - MGP_CBAJ_P0086811 Mki67 protein_coding protein_coding MGP_CBAJ_T0082999.1 MGP_CBAJ_G0031798.1 mouse_genomes_project 7 47089198 47090375 + MGP_CBAJ_P0082999 Nkg7 protein_coding protein_coding MGP_CBAJ_T0083000.1 MGP_CBAJ_G0031798.1 mouse_genomes_project 7 47089255 47090372 + MGP_CBAJ_P0083000 Nkg7 protein_coding protein_coding MGP_CBAJ_T0083001.1 MGP_CBAJ_G0031798.1 mouse_genomes_project 7 47089629 47090375 + Nkg7 protein_coding retained_intron MGP_CBAJ_T0084398.1 MGP_CBAJ_G0032126.1 mouse_genomes_project 7 92631720 92674250 - MGP_CBAJ_P0084398 Abhd17c protein_coding protein_coding MGP_CBAJ_T0084399.1 MGP_CBAJ_G0032126.1 mouse_genomes_project 7 92636622 92670174 - Abhd17c protein_coding processed_transcript MGP_CBAJ_T0083412.1 MGP_CBAJ_G0031904.1 mouse_genomes_project 7 49771704 49778314 + MGP_CBAJ_P0083412 Fut1 protein_coding protein_coding MGP_CBAJ_T0081708.1 MGP_CBAJ_G0031490.1 mouse_genomes_project 7 24159480 24169334 + MGP_CBAJ_P0081708 Zfp108 protein_coding protein_coding MGP_CBAJ_T0081709.1 MGP_CBAJ_G0031490.1 mouse_genomes_project 7 24159694 24169402 + MGP_CBAJ_P0081709 Zfp108 protein_coding protein_coding MGP_CBAJ_T0081710.1 MGP_CBAJ_G0031490.1 mouse_genomes_project 7 24162300 24168873 + MGP_CBAJ_P0081710 Zfp108 protein_coding protein_coding MGP_CBAJ_T0008869.1 MGP_CBAJ_G0007141.1 mouse_genomes_project 7 104113992 104116581 - Gm44601 lincRNA lincRNA MGP_CBAJ_T0008716.1 MGP_CBAJ_G0007030.1 mouse_genomes_project 7 25776163 25786450 + Gm44880 lincRNA lincRNA MGP_CBAJ_T0086853.1 MGP_CBAJ_G0032818.1 mouse_genomes_project 7 154584761 154593103 + MGP_CBAJ_P0086853 Lrrc27 protein_coding protein_coding MGP_CBAJ_T0086854.1 MGP_CBAJ_G0032818.1 mouse_genomes_project 7 154585022 154610877 + MGP_CBAJ_P0086854 Lrrc27 protein_coding protein_coding MGP_CBAJ_T0086855.1 MGP_CBAJ_G0032818.1 mouse_genomes_project 7 154585025 154627688 + MGP_CBAJ_P0086855 Lrrc27 protein_coding unknown_likely_coding MGP_CBAJ_T0086856.1 MGP_CBAJ_G0032818.1 mouse_genomes_project 7 154589521 154599496 + MGP_CBAJ_P0086856 Lrrc27 protein_coding protein_coding MGP_CBAJ_T0086857.1 MGP_CBAJ_G0032818.1 mouse_genomes_project 7 154595411 154608004 + Lrrc27 protein_coding processed_transcript MGP_CBAJ_T0086858.1 MGP_CBAJ_G0032818.1 mouse_genomes_project 7 154599011 154608097 + Lrrc27 protein_coding retained_intron MGP_CBAJ_T0086859.1 MGP_CBAJ_G0032818.1 mouse_genomes_project 7 154615791 154627882 + Lrrc27 protein_coding processed_transcript MGP_CBAJ_T0086860.1 MGP_CBAJ_G0032818.1 mouse_genomes_project 7 154620890 154627883 + Lrrc27 protein_coding processed_transcript MGP_CBAJ_T0086861.1 MGP_CBAJ_G0032818.1 mouse_genomes_project 7 154623492 154627887 + Lrrc27 protein_coding processed_transcript MGP_CBAJ_T0084928.1 MGP_CBAJ_G0032266.1 mouse_genomes_project 7 112833339 112869763 + MGP_CBAJ_P0084928 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084929.1 MGP_CBAJ_G0032266.1 mouse_genomes_project 7 112833339 112869315 + MGP_CBAJ_P0084929 protein_coding protein_coding MGP_CBAJ_T0084931.1 MGP_CBAJ_G0032266.1 mouse_genomes_project 7 112833404 112869233 + MGP_CBAJ_P0084931 protein_coding protein_coding MGP_CBAJ_T0084932.1 MGP_CBAJ_G0032266.1 mouse_genomes_project 7 112846924 112869233 + MGP_CBAJ_P0084932 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084933.1 MGP_CBAJ_G0032266.1 mouse_genomes_project 7 112846928 112869225 + MGP_CBAJ_P0084933 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082698.1 MGP_CBAJ_G0031728.1 mouse_genomes_project 7 32587786 32599361 + MGP_CBAJ_P0082698 Lgi4 protein_coding protein_coding MGP_CBAJ_T0082699.1 MGP_CBAJ_G0031728.1 mouse_genomes_project 7 32589011 32592114 + MGP_CBAJ_P0082699 Lgi4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082700.1 MGP_CBAJ_G0031728.1 mouse_genomes_project 7 32589049 32592519 + MGP_CBAJ_P0082700 Lgi4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082701.1 MGP_CBAJ_G0031728.1 mouse_genomes_project 7 32591994 32593041 + MGP_CBAJ_P0082701 Lgi4 protein_coding protein_coding MGP_CBAJ_T0081800.1 MGP_CBAJ_G0031518.1 mouse_genomes_project 7 24974945 24999768 + MGP_CBAJ_P0081800 Arhgef1 protein_coding protein_coding MGP_CBAJ_T0081801.1 MGP_CBAJ_G0031518.1 mouse_genomes_project 7 24975070 24999765 + MGP_CBAJ_P0081801 Arhgef1 protein_coding protein_coding MGP_CBAJ_T0081802.1 MGP_CBAJ_G0031518.1 mouse_genomes_project 7 24975084 24999765 + MGP_CBAJ_P0081802 Arhgef1 protein_coding protein_coding MGP_CBAJ_T0081803.1 MGP_CBAJ_G0031518.1 mouse_genomes_project 7 24975089 24999770 + MGP_CBAJ_P0081803 Arhgef1 protein_coding protein_coding MGP_CBAJ_T0081804.1 MGP_CBAJ_G0031518.1 mouse_genomes_project 7 24975098 24976423 + Arhgef1 protein_coding processed_transcript MGP_CBAJ_T0081805.1 MGP_CBAJ_G0031518.1 mouse_genomes_project 7 24975104 24979917 + MGP_CBAJ_P0081805 Arhgef1 protein_coding protein_coding MGP_CBAJ_T0081806.1 MGP_CBAJ_G0031518.1 mouse_genomes_project 7 24975108 24981985 + Arhgef1 protein_coding retained_intron MGP_CBAJ_T0081807.1 MGP_CBAJ_G0031518.1 mouse_genomes_project 7 24976394 24985469 + MGP_CBAJ_P0081807 Arhgef1 protein_coding protein_coding MGP_CBAJ_T0081808.1 MGP_CBAJ_G0031518.1 mouse_genomes_project 7 24976396 24999765 + Arhgef1 protein_coding retained_intron MGP_CBAJ_T0081809.1 MGP_CBAJ_G0031518.1 mouse_genomes_project 7 24976443 24984618 + MGP_CBAJ_P0081809 Arhgef1 protein_coding protein_coding MGP_CBAJ_T0081810.1 MGP_CBAJ_G0031518.1 mouse_genomes_project 7 24976445 24999768 + MGP_CBAJ_P0081810 Arhgef1 protein_coding protein_coding MGP_CBAJ_T0081811.1 MGP_CBAJ_G0031518.1 mouse_genomes_project 7 24976478 24996267 + MGP_CBAJ_P0081811 Arhgef1 protein_coding protein_coding MGP_CBAJ_T0081812.1 MGP_CBAJ_G0031518.1 mouse_genomes_project 7 24979671 24984158 + MGP_CBAJ_P0081812 Arhgef1 protein_coding protein_coding MGP_CBAJ_T0081813.1 MGP_CBAJ_G0031518.1 mouse_genomes_project 7 24984634 24988302 + Arhgef1 protein_coding retained_intron MGP_CBAJ_T0081814.1 MGP_CBAJ_G0031518.1 mouse_genomes_project 7 24986740 24999282 + MGP_CBAJ_P0081814 Arhgef1 protein_coding protein_coding MGP_CBAJ_T0081815.1 MGP_CBAJ_G0031518.1 mouse_genomes_project 7 24989111 24995555 + Arhgef1 protein_coding retained_intron MGP_CBAJ_T0081816.1 MGP_CBAJ_G0031518.1 mouse_genomes_project 7 24996423 24998023 + Arhgef1 protein_coding retained_intron MGP_CBAJ_T0081817.1 MGP_CBAJ_G0031518.1 mouse_genomes_project 7 24996528 24998661 + Arhgef1 protein_coding retained_intron MGP_CBAJ_T0081818.1 MGP_CBAJ_G0031518.1 mouse_genomes_project 7 24996538 24999112 + Arhgef1 protein_coding processed_transcript MGP_CBAJ_T0085336.1 MGP_CBAJ_G0032506.1 mouse_genomes_project 7 120833346 120844702 - MGP_CBAJ_P0085336 Nlrp10 protein_coding protein_coding MGP_CBAJ_T0084048.1 MGP_CBAJ_G0032053.1 mouse_genomes_project 7 86894474 86969374 + MGP_CBAJ_P0084048 Acan protein_coding protein_coding MGP_CBAJ_T0084049.1 MGP_CBAJ_G0032053.1 mouse_genomes_project 7 86954066 86968902 + MGP_CBAJ_P0084049 Acan protein_coding protein_coding MGP_CBAJ_T0084716.1 MGP_CBAJ_G0032227.1 mouse_genomes_project 7 110364860 110432115 - MGP_CBAJ_P0084716 Rnf169 protein_coding protein_coding MGP_CBAJ_T0084717.1 MGP_CBAJ_G0032227.1 mouse_genomes_project 7 110380474 110411210 - Rnf169 protein_coding processed_transcript MGP_CBAJ_T0005147.1 MGP_CBAJ_G0004372.1 mouse_genomes_project 7 81692316 81717469 + Gm7580 antisense antisense MGP_CBAJ_T0008770.1 MGP_CBAJ_G0007074.1 mouse_genomes_project 7 49319483 49346030 + lincRNA lincRNA MGP_CBAJ_T0008771.1 MGP_CBAJ_G0007074.1 mouse_genomes_project 7 49345991 49359552 + lincRNA lincRNA MGP_CBAJ_T0005198.1 MGP_CBAJ_G0004406.1 mouse_genomes_project 7 134150786 134153391 - antisense antisense MGP_CBAJ_T0087001.1 MGP_CBAJ_G0032868.1 mouse_genomes_project 7 156508745 156510249 - MGP_CBAJ_P0087001 Cox8b protein_coding protein_coding MGP_CBAJ_T0005120.1 MGP_CBAJ_G0004354.1 mouse_genomes_project 7 38097161 38135507 + E130304I02Rik antisense antisense MGP_CBAJ_T0005121.1 MGP_CBAJ_G0004354.1 mouse_genomes_project 7 38097162 38097597 + E130304I02Rik antisense antisense MGP_CBAJ_T0083183.1 MGP_CBAJ_G0031845.1 mouse_genomes_project 7 48673245 48674516 + MGP_CBAJ_P0083183 protein_coding protein_coding MGP_CBAJ_T0102056.1 MGP_CBAJ_G0040086.1 mouse_genomes_project 7 8464070 8464390 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0102144.1 MGP_CBAJ_G0040173.1 mouse_genomes_project 7 51920448 51960714 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015690.1 MGP_CBAJ_G0013802.1 mouse_genomes_project 7 140788237 140788541 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011574.1 MGP_CBAJ_G0009712.1 mouse_genomes_project 7 159168198 159168658 + Gm27395 misc_RNA misc_RNA MGP_CBAJ_T0085039.1 MGP_CBAJ_G0032334.1 mouse_genomes_project 7 114711127 114712081 - MGP_CBAJ_P0085039 Olfr622 protein_coding protein_coding MGP_CBAJ_T0084341.1 MGP_CBAJ_G0032110.1 mouse_genomes_project 7 90260517 90286124 - MGP_CBAJ_P0084341 Bnc1 protein_coding protein_coding MGP_CBAJ_T0086761.1 MGP_CBAJ_G0032792.1 mouse_genomes_project 7 148544349 148550203 - Mmp21 protein_coding retained_intron MGP_CBAJ_T0086762.1 MGP_CBAJ_G0032792.1 mouse_genomes_project 7 148544349 148550203 - MGP_CBAJ_P0086762 Mmp21 protein_coding protein_coding MGP_CBAJ_T0086763.1 MGP_CBAJ_G0032792.1 mouse_genomes_project 7 148544435 148550203 - MGP_CBAJ_P0086763 Mmp21 protein_coding protein_coding MGP_CBAJ_T0080808.1 MGP_CBAJ_G0031191.1 mouse_genomes_project 7 702617 724330 - MGP_CBAJ_P0080808 Mboat7 protein_coding protein_coding MGP_CBAJ_T0080809.1 MGP_CBAJ_G0031191.1 mouse_genomes_project 7 702621 722921 - MGP_CBAJ_P0080809 Mboat7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080810.1 MGP_CBAJ_G0031191.1 mouse_genomes_project 7 703230 722670 - MGP_CBAJ_P0080810 Mboat7 protein_coding protein_coding MGP_CBAJ_T0080811.1 MGP_CBAJ_G0031191.1 mouse_genomes_project 7 703603 712319 - Mboat7 protein_coding retained_intron MGP_CBAJ_T0080812.1 MGP_CBAJ_G0031191.1 mouse_genomes_project 7 711148 723759 - Mboat7 protein_coding retained_intron MGP_CBAJ_T0080813.1 MGP_CBAJ_G0031191.1 mouse_genomes_project 7 713394 723966 - MGP_CBAJ_P0080813 Mboat7 protein_coding protein_coding MGP_CBAJ_T0080814.1 MGP_CBAJ_G0031191.1 mouse_genomes_project 7 713749 723695 - MGP_CBAJ_P0080814 Mboat7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080815.1 MGP_CBAJ_G0031191.1 mouse_genomes_project 7 713765 723695 - MGP_CBAJ_P0080815 Mboat7 protein_coding protein_coding MGP_CBAJ_T0080816.1 MGP_CBAJ_G0031191.1 mouse_genomes_project 7 719233 723569 - MGP_CBAJ_P0080816 Mboat7 protein_coding protein_coding MGP_CBAJ_T0080817.1 MGP_CBAJ_G0031191.1 mouse_genomes_project 7 719662 723769 - Mboat7 protein_coding retained_intron MGP_CBAJ_T0080818.1 MGP_CBAJ_G0031191.1 mouse_genomes_project 7 719960 723587 - Mboat7 protein_coding retained_intron MGP_CBAJ_T0080819.1 MGP_CBAJ_G0031191.1 mouse_genomes_project 7 720488 723745 - Mboat7 protein_coding retained_intron MGP_CBAJ_T0080820.1 MGP_CBAJ_G0031191.1 mouse_genomes_project 7 722503 723461 - Mboat7 protein_coding retained_intron MGP_CBAJ_T0083944.1 MGP_CBAJ_G0032034.1 mouse_genomes_project 7 75319265 75331463 - MGP_CBAJ_P0083944 Arrdc4 protein_coding protein_coding MGP_CBAJ_T0083945.1 MGP_CBAJ_G0032034.1 mouse_genomes_project 7 75323732 75327128 - Arrdc4 protein_coding retained_intron MGP_CBAJ_T0083946.1 MGP_CBAJ_G0032034.1 mouse_genomes_project 7 75323824 75331410 - MGP_CBAJ_P0083946 Arrdc4 protein_coding protein_coding MGP_CBAJ_T0081963.1 MGP_CBAJ_G0031550.1 mouse_genomes_project 7 26023556 26040484 - MGP_CBAJ_P0081963 Cyp2s1 protein_coding protein_coding MGP_CBAJ_T0081964.1 MGP_CBAJ_G0031550.1 mouse_genomes_project 7 26023556 26040224 - MGP_CBAJ_P0081964 Cyp2s1 protein_coding protein_coding MGP_CBAJ_T0081965.1 MGP_CBAJ_G0031550.1 mouse_genomes_project 7 26025229 26040129 - Cyp2s1 protein_coding retained_intron MGP_CBAJ_T0081966.1 MGP_CBAJ_G0031550.1 mouse_genomes_project 7 26030405 26038963 - MGP_CBAJ_P0081966 Cyp2s1 protein_coding protein_coding MGP_CBAJ_T0005240.1 MGP_CBAJ_G0004438.1 mouse_genomes_project 7 160637300 160654800 + Faddos antisense antisense MGP_CBAJ_T0081038.1 MGP_CBAJ_G0031241.1 mouse_genomes_project 7 2298556 2300747 + MGP_CBAJ_P0081038 Zfp580 protein_coding protein_coding MGP_CBAJ_T0098084.1 MGP_CBAJ_G0036357.1 mouse_genomes_project 7 15403995 15404115 + n-R5s151 rRNA rRNA MGP_CBAJ_T0082770.1 MGP_CBAJ_G0031746.1 mouse_genomes_project 7 36262672 36295108 - MGP_CBAJ_P0082770 protein_coding protein_coding MGP_CBAJ_T0082771.1 MGP_CBAJ_G0031746.1 mouse_genomes_project 7 36263501 36272765 - protein_coding retained_intron MGP_CBAJ_T0082772.1 MGP_CBAJ_G0031746.1 mouse_genomes_project 7 36263548 36270296 - MGP_CBAJ_P0082772 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082773.1 MGP_CBAJ_G0031746.1 mouse_genomes_project 7 36264851 36275827 - MGP_CBAJ_P0082773 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082774.1 MGP_CBAJ_G0031746.1 mouse_genomes_project 7 36264851 36292527 - MGP_CBAJ_P0082774 protein_coding protein_coding MGP_CBAJ_T0082775.1 MGP_CBAJ_G0031746.1 mouse_genomes_project 7 36265082 36295029 - MGP_CBAJ_P0082775 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082776.1 MGP_CBAJ_G0031746.1 mouse_genomes_project 7 36265208 36268662 - protein_coding retained_intron MGP_CBAJ_T0082777.1 MGP_CBAJ_G0031746.1 mouse_genomes_project 7 36277599 36295035 - protein_coding retained_intron MGP_CBAJ_T0082778.1 MGP_CBAJ_G0031746.1 mouse_genomes_project 7 36290651 36293468 - protein_coding processed_transcript MGP_CBAJ_T0102048.1 MGP_CBAJ_G0040078.1 mouse_genomes_project 7 1361243 1362080 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081212.1 MGP_CBAJ_G0031322.1 mouse_genomes_project 7 11201278 11217508 - MGP_CBAJ_P0081212 Mzf1 protein_coding protein_coding MGP_CBAJ_T0081213.1 MGP_CBAJ_G0031322.1 mouse_genomes_project 7 11201282 11216616 - MGP_CBAJ_P0081213 Mzf1 protein_coding protein_coding MGP_CBAJ_T0081214.1 MGP_CBAJ_G0031322.1 mouse_genomes_project 7 11201284 11217273 - Mzf1 protein_coding retained_intron MGP_CBAJ_T0081215.1 MGP_CBAJ_G0031322.1 mouse_genomes_project 7 11209066 11217673 - Mzf1 protein_coding retained_intron MGP_CBAJ_T0083589.1 MGP_CBAJ_G0031953.1 mouse_genomes_project 7 51689505 51690677 - MGP_CBAJ_P0083589 protein_coding protein_coding MGP_CBAJ_T0081087.1 MGP_CBAJ_G0031261.1 mouse_genomes_project 7 3763933 3774549 + MGP_CBAJ_P0081087 Zfp78 protein_coding protein_coding MGP_CBAJ_T0081088.1 MGP_CBAJ_G0031261.1 mouse_genomes_project 7 3763933 3774549 + MGP_CBAJ_P0081088 Zfp78 protein_coding protein_coding MGP_CBAJ_T0084793.1 MGP_CBAJ_G0032243.1 mouse_genomes_project 7 111331948 111399093 + MGP_CBAJ_P0084793 Fam168a protein_coding protein_coding MGP_CBAJ_T0002220.1 MGP_CBAJ_G0002134.1 mouse_genomes_project 7 81047045 81047735 - TEC TEC MGP_CBAJ_T0015653.1 MGP_CBAJ_G0013765.1 mouse_genomes_project 7 111054862 111062062 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0084600.1 MGP_CBAJ_G0032197.1 mouse_genomes_project 7 107865233 107879606 - MGP_CBAJ_P0084600 Aqp11 protein_coding protein_coding MGP_CBAJ_T0084601.1 MGP_CBAJ_G0032197.1 mouse_genomes_project 7 107867612 107879256 - MGP_CBAJ_P0084601 Aqp11 protein_coding protein_coding MGP_CBAJ_T0084602.1 MGP_CBAJ_G0032197.1 mouse_genomes_project 7 107867781 107870612 - Aqp11 protein_coding retained_intron MGP_CBAJ_T0084603.1 MGP_CBAJ_G0032197.1 mouse_genomes_project 7 107868656 107874503 - Aqp11 protein_coding retained_intron MGP_CBAJ_T0084604.1 MGP_CBAJ_G0032197.1 mouse_genomes_project 7 107870277 107871733 - Aqp11 protein_coding processed_transcript MGP_CBAJ_T0085970.1 MGP_CBAJ_G0032646.1 mouse_genomes_project 7 140288825 140296594 - MGP_CBAJ_P0085970 Lat protein_coding protein_coding MGP_CBAJ_T0085971.1 MGP_CBAJ_G0032646.1 mouse_genomes_project 7 140288828 140296587 - MGP_CBAJ_P0085971 Lat protein_coding protein_coding MGP_CBAJ_T0085972.1 MGP_CBAJ_G0032646.1 mouse_genomes_project 7 140288905 140289888 - Lat protein_coding retained_intron MGP_CBAJ_T0085973.1 MGP_CBAJ_G0032646.1 mouse_genomes_project 7 140294570 140296623 - Lat protein_coding retained_intron MGP_CBAJ_T0085974.1 MGP_CBAJ_G0032646.1 mouse_genomes_project 7 140295151 140296547 - MGP_CBAJ_P0085974 Lat protein_coding protein_coding MGP_CBAJ_T0085975.1 MGP_CBAJ_G0032646.1 mouse_genomes_project 7 140295709 140296393 - Lat protein_coding retained_intron MGP_CBAJ_T0008735.1 MGP_CBAJ_G0007048.1 mouse_genomes_project 7 38064624 38071357 + Gm26790 lincRNA lincRNA MGP_CBAJ_T0011562.1 MGP_CBAJ_G0009700.1 mouse_genomes_project 7 87253691 87253949 - Gm24224 misc_RNA misc_RNA MGP_CBAJ_T0018145.1 MGP_CBAJ_G0015424.1 mouse_genomes_project 7 108376569 108378779 + Gm16938 processed_transcript processed_transcript MGP_CBAJ_T0018146.1 MGP_CBAJ_G0015424.1 mouse_genomes_project 7 108376616 108378779 + Gm16938 processed_transcript processed_transcript MGP_CBAJ_T0085823.1 MGP_CBAJ_G0032621.1 mouse_genomes_project 7 135532835 135538792 - Ndufab1 protein_coding retained_intron MGP_CBAJ_T0085824.1 MGP_CBAJ_G0032621.1 mouse_genomes_project 7 135537822 135540097 - Ndufab1 protein_coding retained_intron MGP_CBAJ_T0085825.1 MGP_CBAJ_G0032621.1 mouse_genomes_project 7 135537828 135548827 - MGP_CBAJ_P0085825 Ndufab1 protein_coding protein_coding MGP_CBAJ_T0085826.1 MGP_CBAJ_G0032621.1 mouse_genomes_project 7 135537837 135540787 - Ndufab1 protein_coding retained_intron MGP_CBAJ_T0085827.1 MGP_CBAJ_G0032621.1 mouse_genomes_project 7 135538530 135548740 - MGP_CBAJ_P0085827 Ndufab1 protein_coding protein_coding MGP_CBAJ_T0085828.1 MGP_CBAJ_G0032621.1 mouse_genomes_project 7 135540129 135548711 - Ndufab1 protein_coding retained_intron MGP_CBAJ_T0085829.1 MGP_CBAJ_G0032621.1 mouse_genomes_project 7 135541036 135548352 - Ndufab1 protein_coding processed_transcript MGP_CBAJ_T0085830.1 MGP_CBAJ_G0032621.1 mouse_genomes_project 7 135543467 135548833 - Ndufab1 protein_coding retained_intron MGP_CBAJ_T0085651.1 MGP_CBAJ_G0032574.1 mouse_genomes_project 7 131726717 131756998 + MGP_CBAJ_P0085651 Ccp110 protein_coding protein_coding MGP_CBAJ_T0085652.1 MGP_CBAJ_G0032574.1 mouse_genomes_project 7 131729587 131756995 + MGP_CBAJ_P0085652 Ccp110 protein_coding protein_coding MGP_CBAJ_T0085653.1 MGP_CBAJ_G0032574.1 mouse_genomes_project 7 131739552 131756990 + Ccp110 protein_coding retained_intron MGP_CBAJ_T0085654.1 MGP_CBAJ_G0032574.1 mouse_genomes_project 7 131743882 131756998 + Ccp110 protein_coding retained_intron MGP_CBAJ_T0085655.1 MGP_CBAJ_G0032574.1 mouse_genomes_project 7 131748184 131752436 + Ccp110 protein_coding retained_intron MGP_CBAJ_T0102213.1 MGP_CBAJ_G0040242.1 mouse_genomes_project 7 115802169 115803123 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0082058.1 MGP_CBAJ_G0031578.1 mouse_genomes_project 7 27997860 28019713 - MGP_CBAJ_P0082058 Ltbp4 protein_coding protein_coding MGP_CBAJ_T0085328.1 MGP_CBAJ_G0032499.1 mouse_genomes_project 7 120599144 120600200 + MGP_CBAJ_P0085328 Olfr512 protein_coding protein_coding MGP_CBAJ_T0084589.1 MGP_CBAJ_G0032195.1 mouse_genomes_project 7 107697882 107700972 + Rsf1 protein_coding retained_intron MGP_CBAJ_T0084590.1 MGP_CBAJ_G0032195.1 mouse_genomes_project 7 107697890 107819510 + Rsf1 protein_coding retained_intron MGP_CBAJ_T0084591.1 MGP_CBAJ_G0032195.1 mouse_genomes_project 7 107697890 107825826 + MGP_CBAJ_P0084591 Rsf1 protein_coding protein_coding MGP_CBAJ_T0084592.1 MGP_CBAJ_G0032195.1 mouse_genomes_project 7 107697900 107767430 + MGP_CBAJ_P0084592 Rsf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084593.1 MGP_CBAJ_G0032195.1 mouse_genomes_project 7 107786956 107790577 + Rsf1 protein_coding retained_intron MGP_CBAJ_T0084594.1 MGP_CBAJ_G0032195.1 mouse_genomes_project 7 107792199 107819698 + MGP_CBAJ_P0084594 Rsf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084595.1 MGP_CBAJ_G0032195.1 mouse_genomes_project 7 107799134 107809223 + Rsf1 protein_coding retained_intron MGP_CBAJ_T0084596.1 MGP_CBAJ_G0032195.1 mouse_genomes_project 7 107799489 107813803 + MGP_CBAJ_P0084596 Rsf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087093.1 MGP_CBAJ_G0032893.1 mouse_genomes_project 7 156995156 157000695 + Tmem80 protein_coding processed_transcript MGP_CBAJ_T0087094.1 MGP_CBAJ_G0032893.1 mouse_genomes_project 7 156995305 157004561 + MGP_CBAJ_P0087094 Tmem80 protein_coding protein_coding MGP_CBAJ_T0087095.1 MGP_CBAJ_G0032893.1 mouse_genomes_project 7 156995305 157003622 + MGP_CBAJ_P0087095 Tmem80 protein_coding protein_coding MGP_CBAJ_T0087096.1 MGP_CBAJ_G0032893.1 mouse_genomes_project 7 156995547 157004216 + MGP_CBAJ_P0087096 Tmem80 protein_coding protein_coding MGP_CBAJ_T0087097.1 MGP_CBAJ_G0032893.1 mouse_genomes_project 7 156995547 157004561 + MGP_CBAJ_P0087097 Tmem80 protein_coding protein_coding MGP_CBAJ_T0087098.1 MGP_CBAJ_G0032893.1 mouse_genomes_project 7 156995577 157000736 + Tmem80 protein_coding processed_transcript MGP_CBAJ_T0087099.1 MGP_CBAJ_G0032893.1 mouse_genomes_project 7 157000722 157004218 + MGP_CBAJ_P0087099 Tmem80 protein_coding protein_coding MGP_CBAJ_T0087100.1 MGP_CBAJ_G0032893.1 mouse_genomes_project 7 157000789 157003472 + MGP_CBAJ_P0087100 Tmem80 protein_coding protein_coding MGP_CBAJ_T0087101.1 MGP_CBAJ_G0032893.1 mouse_genomes_project 7 157001066 157003552 + Tmem80 protein_coding retained_intron MGP_CBAJ_T0015468.1 MGP_CBAJ_G0013580.1 mouse_genomes_project 7 3220109 3221064 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0085637.1 MGP_CBAJ_G0032570.1 mouse_genomes_project 7 131492812 131517728 - MGP_CBAJ_P0085637 Coq7 protein_coding protein_coding MGP_CBAJ_T0085638.1 MGP_CBAJ_G0032570.1 mouse_genomes_project 7 131509422 131517783 - MGP_CBAJ_P0085638 Coq7 protein_coding protein_coding MGP_CBAJ_T0085639.1 MGP_CBAJ_G0032570.1 mouse_genomes_project 7 131511169 131517741 - Coq7 protein_coding retained_intron MGP_CBAJ_T0080761.1 MGP_CBAJ_G0031180.1 mouse_genomes_project 7 329001 372089 + MGP_CBAJ_P0080761 Cacng7 protein_coding protein_coding MGP_CBAJ_T0080762.1 MGP_CBAJ_G0031180.1 mouse_genomes_project 7 337571 370940 + Cacng7 protein_coding retained_intron MGP_CBAJ_T0081419.1 MGP_CBAJ_G0031388.1 mouse_genomes_project 7 16067358 16110214 - MGP_CBAJ_P0081419 Hif3a protein_coding protein_coding MGP_CBAJ_T0081420.1 MGP_CBAJ_G0031388.1 mouse_genomes_project 7 16071579 16104347 - MGP_CBAJ_P0081420 Hif3a protein_coding protein_coding MGP_CBAJ_T0081421.1 MGP_CBAJ_G0031388.1 mouse_genomes_project 7 16087333 16091349 - MGP_CBAJ_P0081421 Hif3a protein_coding protein_coding MGP_CBAJ_T0081422.1 MGP_CBAJ_G0031388.1 mouse_genomes_project 7 16094168 16110171 - MGP_CBAJ_P0081422 Hif3a protein_coding protein_coding MGP_CBAJ_T0087112.1 MGP_CBAJ_G0032895.1 mouse_genomes_project 7 157087144 157097943 + MGP_CBAJ_P0087112 Taldo1 protein_coding protein_coding MGP_CBAJ_T0087113.1 MGP_CBAJ_G0032895.1 mouse_genomes_project 7 157087188 157094098 + Taldo1 protein_coding retained_intron MGP_CBAJ_T0087114.1 MGP_CBAJ_G0032895.1 mouse_genomes_project 7 157095128 157097181 + Taldo1 protein_coding retained_intron MGP_CBAJ_T0018122.1 MGP_CBAJ_G0015417.1 mouse_genomes_project 7 77153298 77208341 + processed_transcript antisense MGP_CBAJ_T0018123.1 MGP_CBAJ_G0015417.1 mouse_genomes_project 7 77178242 77208345 + processed_transcript retained_intron MGP_CBAJ_T0018124.1 MGP_CBAJ_G0015417.1 mouse_genomes_project 7 77178242 77199880 + processed_transcript antisense MGP_CBAJ_T0018125.1 MGP_CBAJ_G0015417.1 mouse_genomes_project 7 77181557 77182095 + processed_transcript processed_transcript MGP_CBAJ_T0086970.1 MGP_CBAJ_G0032862.1 mouse_genomes_project 7 156450291 156451514 + MGP_CBAJ_P0086970 Scgb1c1 protein_coding protein_coding MGP_CBAJ_T0085054.1 MGP_CBAJ_G0032349.1 mouse_genomes_project 7 115025722 115026658 - MGP_CBAJ_P0085054 Olfr66 protein_coding protein_coding MGP_CBAJ_T0100755.1 MGP_CBAJ_G0039010.1 mouse_genomes_project 7 110041827 110041958 - Gm25409 snoRNA snoRNA MGP_CBAJ_T0002171.1 MGP_CBAJ_G0002086.1 mouse_genomes_project 7 39151192 39152351 + TEC TEC MGP_CBAJ_T0081673.1 MGP_CBAJ_G0031473.1 mouse_genomes_project 7 23207058 23207802 - MGP_CBAJ_P0081673 protein_coding protein_coding MGP_CBAJ_T0084633.1 MGP_CBAJ_G0032204.1 mouse_genomes_project 7 108415452 108523151 - MGP_CBAJ_P0084633 Acer3 protein_coding protein_coding MGP_CBAJ_T0084634.1 MGP_CBAJ_G0032204.1 mouse_genomes_project 7 108418071 108523229 - MGP_CBAJ_P0084634 Acer3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084635.1 MGP_CBAJ_G0032204.1 mouse_genomes_project 7 108428624 108432553 - Acer3 protein_coding retained_intron MGP_CBAJ_T0084636.1 MGP_CBAJ_G0032204.1 mouse_genomes_project 7 108456345 108523207 - MGP_CBAJ_P0084636 Acer3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083321.1 MGP_CBAJ_G0031884.1 mouse_genomes_project 7 49390017 49425753 - MGP_CBAJ_P0083321 Trpm4 protein_coding protein_coding MGP_CBAJ_T0083520.1 MGP_CBAJ_G0031936.1 mouse_genomes_project 7 50726085 50939998 - MGP_CBAJ_P0083520 Sergef protein_coding protein_coding MGP_CBAJ_T0083521.1 MGP_CBAJ_G0031936.1 mouse_genomes_project 7 50726138 50899080 - Sergef protein_coding processed_transcript MGP_CBAJ_T0083522.1 MGP_CBAJ_G0031936.1 mouse_genomes_project 7 50726391 50910626 - Sergef protein_coding processed_transcript MGP_CBAJ_T0083523.1 MGP_CBAJ_G0031936.1 mouse_genomes_project 7 50796803 50939963 - MGP_CBAJ_P0083523 Sergef protein_coding unknown_likely_coding MGP_CBAJ_T0083524.1 MGP_CBAJ_G0031936.1 mouse_genomes_project 7 50929828 50933116 - Sergef protein_coding retained_intron MGP_CBAJ_T0083525.1 MGP_CBAJ_G0031936.1 mouse_genomes_project 7 50929850 50939822 - MGP_CBAJ_P0083525 Sergef protein_coding protein_coding MGP_CBAJ_T0083526.1 MGP_CBAJ_G0031936.1 mouse_genomes_project 7 50929864 50939771 - Sergef protein_coding processed_transcript MGP_CBAJ_T0081017.1 MGP_CBAJ_G0031231.1 mouse_genomes_project 7 2155460 2174676 + MGP_CBAJ_P0081017 Ssc5d protein_coding protein_coding MGP_CBAJ_T0085688.1 MGP_CBAJ_G0032584.1 mouse_genomes_project 7 132634632 132681055 + MGP_CBAJ_P0085688 Acsm2 protein_coding protein_coding MGP_CBAJ_T0085689.1 MGP_CBAJ_G0032584.1 mouse_genomes_project 7 132641362 132676959 + MGP_CBAJ_P0085689 Acsm2 protein_coding protein_coding MGP_CBAJ_T0085690.1 MGP_CBAJ_G0032584.1 mouse_genomes_project 7 132641577 132681055 + MGP_CBAJ_P0085690 Acsm2 protein_coding protein_coding MGP_CBAJ_T0085691.1 MGP_CBAJ_G0032584.1 mouse_genomes_project 7 132641581 132658857 + MGP_CBAJ_P0085691 Acsm2 protein_coding protein_coding MGP_CBAJ_T0085692.1 MGP_CBAJ_G0032584.1 mouse_genomes_project 7 132641655 132662582 + Acsm2 protein_coding processed_transcript MGP_CBAJ_T0085693.1 MGP_CBAJ_G0032584.1 mouse_genomes_project 7 132643490 132676367 + MGP_CBAJ_P0085693 Acsm2 protein_coding unknown_likely_coding MGP_CBAJ_T0085694.1 MGP_CBAJ_G0032584.1 mouse_genomes_project 7 132661322 132676528 + MGP_CBAJ_P0085694 Acsm2 protein_coding protein_coding MGP_CBAJ_T0085695.1 MGP_CBAJ_G0032584.1 mouse_genomes_project 7 132669209 132672912 + MGP_CBAJ_P0085695 Acsm2 protein_coding protein_coding MGP_CBAJ_T0085696.1 MGP_CBAJ_G0032584.1 mouse_genomes_project 7 132671228 132671818 + Acsm2 protein_coding retained_intron MGP_CBAJ_T0087090.1 MGP_CBAJ_G0032891.1 mouse_genomes_project 7 156959425 156962407 + MGP_CBAJ_P0087090 Drd4 protein_coding protein_coding MGP_CBAJ_T0087251.1 MGP_CBAJ_G0032924.1 mouse_genomes_project 7 158208413 158219944 - MGP_CBAJ_P0087251 Ctsd protein_coding protein_coding MGP_CBAJ_T0087252.1 MGP_CBAJ_G0032924.1 mouse_genomes_project 7 158213186 158225315 - MGP_CBAJ_P0087252 Ctsd protein_coding protein_coding MGP_CBAJ_T0087253.1 MGP_CBAJ_G0032924.1 mouse_genomes_project 7 158213205 158225096 - MGP_CBAJ_P0087253 Ctsd protein_coding nonsense_mediated_decay MGP_CBAJ_T0087254.1 MGP_CBAJ_G0032924.1 mouse_genomes_project 7 158220470 158225096 - Ctsd protein_coding retained_intron MGP_CBAJ_T0086261.1 MGP_CBAJ_G0032694.1 mouse_genomes_project 7 141225611 141229952 - MGP_CBAJ_P0086261 Cd2bp2 protein_coding protein_coding MGP_CBAJ_T0086262.1 MGP_CBAJ_G0032694.1 mouse_genomes_project 7 141225947 141229890 - MGP_CBAJ_P0086262 Cd2bp2 protein_coding protein_coding MGP_CBAJ_T0086263.1 MGP_CBAJ_G0032694.1 mouse_genomes_project 7 141225974 141229901 - Cd2bp2 protein_coding retained_intron MGP_CBAJ_T0086264.1 MGP_CBAJ_G0032694.1 mouse_genomes_project 7 141225976 141229939 - MGP_CBAJ_P0086264 Cd2bp2 protein_coding protein_coding MGP_CBAJ_T0086265.1 MGP_CBAJ_G0032694.1 mouse_genomes_project 7 141227609 141229827 - MGP_CBAJ_P0086265 Cd2bp2 protein_coding protein_coding MGP_CBAJ_T0086266.1 MGP_CBAJ_G0032694.1 mouse_genomes_project 7 141228413 141229396 - MGP_CBAJ_P0086266 Cd2bp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086267.1 MGP_CBAJ_G0032694.1 mouse_genomes_project 7 141228478 141229894 - MGP_CBAJ_P0086267 Cd2bp2 protein_coding protein_coding MGP_CBAJ_T0086268.1 MGP_CBAJ_G0032694.1 mouse_genomes_project 7 141228573 141229918 - MGP_CBAJ_P0086268 Cd2bp2 protein_coding protein_coding MGP_CBAJ_T0086269.1 MGP_CBAJ_G0032694.1 mouse_genomes_project 7 141229043 141230002 - MGP_CBAJ_P0086269 Cd2bp2 protein_coding protein_coding MGP_CBAJ_T0015624.1 MGP_CBAJ_G0013736.1 mouse_genomes_project 7 89431504 89432017 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008881.1 MGP_CBAJ_G0007150.1 mouse_genomes_project 7 120868161 120881916 - Gm26599 lincRNA lincRNA MGP_CBAJ_T0015702.1 MGP_CBAJ_G0013814.1 mouse_genomes_project 7 143385741 143386427 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0083517.1 MGP_CBAJ_G0031935.1 mouse_genomes_project 7 50679606 50716267 + MGP_CBAJ_P0083517 Kcnc1 protein_coding protein_coding MGP_CBAJ_T0083518.1 MGP_CBAJ_G0031935.1 mouse_genomes_project 7 50680757 50721293 + MGP_CBAJ_P0083518 Kcnc1 protein_coding protein_coding MGP_CBAJ_T0083519.1 MGP_CBAJ_G0031935.1 mouse_genomes_project 7 50705580 50710724 + Kcnc1 protein_coding processed_transcript MGP_CBAJ_T0015567.1 MGP_CBAJ_G0013679.1 mouse_genomes_project 7 46173260 46173796 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0083995.1 MGP_CBAJ_G0032045.1 mouse_genomes_project 7 83295190 83338879 + MGP_CBAJ_P0083995 Klhl25 protein_coding protein_coding MGP_CBAJ_T0083996.1 MGP_CBAJ_G0032045.1 mouse_genomes_project 7 83295218 83338878 + MGP_CBAJ_P0083996 Klhl25 protein_coding protein_coding MGP_CBAJ_T0083997.1 MGP_CBAJ_G0032045.1 mouse_genomes_project 7 83295221 83325018 + MGP_CBAJ_P0083997 Klhl25 protein_coding protein_coding MGP_CBAJ_T0083998.1 MGP_CBAJ_G0032045.1 mouse_genomes_project 7 83295244 83325014 + MGP_CBAJ_P0083998 Klhl25 protein_coding protein_coding MGP_CBAJ_T0083999.1 MGP_CBAJ_G0032045.1 mouse_genomes_project 7 83295277 83338273 + Klhl25 protein_coding processed_transcript MGP_CBAJ_T0084000.1 MGP_CBAJ_G0032045.1 mouse_genomes_project 7 83295321 83323154 + MGP_CBAJ_P0084000 Klhl25 protein_coding protein_coding MGP_CBAJ_T0008767.1 MGP_CBAJ_G0007071.1 mouse_genomes_project 7 47577281 47578609 - Gm44707 lincRNA lincRNA MGP_CBAJ_T0084410.1 MGP_CBAJ_G0032132.1 mouse_genomes_project 7 93531714 93556850 - MGP_CBAJ_P0084410 Vmn2r65 protein_coding protein_coding MGP_CBAJ_T0085574.1 MGP_CBAJ_G0032560.1 mouse_genomes_project 7 128778610 128899702 - MGP_CBAJ_P0085574 Plekha7 protein_coding protein_coding MGP_CBAJ_T0085575.1 MGP_CBAJ_G0032560.1 mouse_genomes_project 7 128778618 128988687 - MGP_CBAJ_P0085575 Plekha7 protein_coding protein_coding MGP_CBAJ_T0085576.1 MGP_CBAJ_G0032560.1 mouse_genomes_project 7 128778651 128787802 - MGP_CBAJ_P0085576 Plekha7 protein_coding unknown_likely_coding MGP_CBAJ_T0085577.1 MGP_CBAJ_G0032560.1 mouse_genomes_project 7 128781159 128844712 - MGP_CBAJ_P0085577 Plekha7 protein_coding protein_coding MGP_CBAJ_T0085578.1 MGP_CBAJ_G0032560.1 mouse_genomes_project 7 128788891 128844989 - MGP_CBAJ_P0085578 Plekha7 protein_coding protein_coding MGP_CBAJ_T0085579.1 MGP_CBAJ_G0032560.1 mouse_genomes_project 7 128790030 128988665 - MGP_CBAJ_P0085579 Plekha7 protein_coding protein_coding MGP_CBAJ_T0085580.1 MGP_CBAJ_G0032560.1 mouse_genomes_project 7 128790127 128988643 - MGP_CBAJ_P0085580 Plekha7 protein_coding protein_coding MGP_CBAJ_T0085581.1 MGP_CBAJ_G0032560.1 mouse_genomes_project 7 128797796 128812951 - MGP_CBAJ_P0085581 Plekha7 protein_coding protein_coding MGP_CBAJ_T0085582.1 MGP_CBAJ_G0032560.1 mouse_genomes_project 7 128811127 128899556 - Plekha7 protein_coding retained_intron MGP_CBAJ_T0085583.1 MGP_CBAJ_G0032560.1 mouse_genomes_project 7 128818244 128819180 - Plekha7 protein_coding retained_intron MGP_CBAJ_T0085584.1 MGP_CBAJ_G0032560.1 mouse_genomes_project 7 128819556 128839900 - Plekha7 protein_coding processed_transcript MGP_CBAJ_T0085585.1 MGP_CBAJ_G0032560.1 mouse_genomes_project 7 128825779 128927475 - MGP_CBAJ_P0085585 Plekha7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085586.1 MGP_CBAJ_G0032560.1 mouse_genomes_project 7 128825902 128842385 - Plekha7 protein_coding processed_transcript MGP_CBAJ_T0085587.1 MGP_CBAJ_G0032560.1 mouse_genomes_project 7 128831113 128988551 - MGP_CBAJ_P0085587 Plekha7 protein_coding protein_coding MGP_CBAJ_T0085588.1 MGP_CBAJ_G0032560.1 mouse_genomes_project 7 128832287 128988360 - Plekha7 protein_coding retained_intron MGP_CBAJ_T0085589.1 MGP_CBAJ_G0032560.1 mouse_genomes_project 7 128832333 128836061 - Plekha7 protein_coding retained_intron MGP_CBAJ_T0085590.1 MGP_CBAJ_G0032560.1 mouse_genomes_project 7 128836628 128933437 - Plekha7 protein_coding processed_transcript MGP_CBAJ_T0102167.1 MGP_CBAJ_G0040196.1 mouse_genomes_project 7 93455141 93458189 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085988.1 MGP_CBAJ_G0032648.1 mouse_genomes_project 7 140309906 140326999 - MGP_CBAJ_P0085988 Nfatc2ip protein_coding protein_coding MGP_CBAJ_T0085989.1 MGP_CBAJ_G0032648.1 mouse_genomes_project 7 140311953 140320819 - MGP_CBAJ_P0085989 Nfatc2ip protein_coding protein_coding MGP_CBAJ_T0084412.1 MGP_CBAJ_G0032134.1 mouse_genomes_project 7 94916865 94942367 - MGP_CBAJ_P0084412 Vmn2r75 protein_coding protein_coding MGP_CBAJ_T0015611.1 MGP_CBAJ_G0013723.1 mouse_genomes_project 7 80950174 80950540 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0082738.1 MGP_CBAJ_G0031733.1 mouse_genomes_project 7 32834932 32853786 + MGP_CBAJ_P0082738 Scgb2b2 protein_coding protein_coding MGP_CBAJ_T0082740.1 MGP_CBAJ_G0031733.1 mouse_genomes_project 7 32851569 32853786 + MGP_CBAJ_P0082740 Scgb2b2 protein_coding protein_coding MGP_CBAJ_T0084422.1 MGP_CBAJ_G0032143.1 mouse_genomes_project 7 95220127 95238042 + MGP_CBAJ_P0084422 Olfr301 protein_coding protein_coding MGP_CBAJ_T0086959.1 MGP_CBAJ_G0032856.1 mouse_genomes_project 7 156271659 156276953 + MGP_CBAJ_P0086959 Olfr45 protein_coding protein_coding MGP_CBAJ_T0015486.1 MGP_CBAJ_G0013598.1 mouse_genomes_project 7 12246160 12260944 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002206.1 MGP_CBAJ_G0002121.1 mouse_genomes_project 7 70448828 70449429 + TEC TEC MGP_CBAJ_T0083397.1 MGP_CBAJ_G0031901.1 mouse_genomes_project 7 49696849 49714300 + MGP_CBAJ_P0083397 Hsd17b14 protein_coding protein_coding MGP_CBAJ_T0083398.1 MGP_CBAJ_G0031901.1 mouse_genomes_project 7 49696893 49714731 + MGP_CBAJ_P0083398 Hsd17b14 protein_coding protein_coding MGP_CBAJ_T0083399.1 MGP_CBAJ_G0031901.1 mouse_genomes_project 7 49698003 49714297 + Hsd17b14 protein_coding retained_intron MGP_CBAJ_T0083400.1 MGP_CBAJ_G0031901.1 mouse_genomes_project 7 49700945 49712988 + Hsd17b14 protein_coding retained_intron MGP_CBAJ_T0083401.1 MGP_CBAJ_G0031901.1 mouse_genomes_project 7 49705807 49713163 + Hsd17b14 protein_coding processed_transcript MGP_CBAJ_T0083402.1 MGP_CBAJ_G0031901.1 mouse_genomes_project 7 49705818 49713666 + Hsd17b14 protein_coding processed_transcript MGP_CBAJ_T0083403.1 MGP_CBAJ_G0031901.1 mouse_genomes_project 7 49706781 49713180 + Hsd17b14 protein_coding processed_transcript MGP_CBAJ_T0085850.1 MGP_CBAJ_G0032626.1 mouse_genomes_project 7 135696670 135702361 + MGP_CBAJ_P0085850 Chp2 protein_coding protein_coding MGP_CBAJ_T0085851.1 MGP_CBAJ_G0032626.1 mouse_genomes_project 7 135701109 135701720 + Chp2 protein_coding processed_transcript MGP_CBAJ_T0099531.1 MGP_CBAJ_G0037786.1 mouse_genomes_project 7 154567823 154567921 - Gm27975 snRNA snRNA MGP_CBAJ_T0086907.1 MGP_CBAJ_G0032831.1 mouse_genomes_project 7 155550869 155566391 - MGP_CBAJ_P0086907 Caly protein_coding protein_coding MGP_CBAJ_T0086908.1 MGP_CBAJ_G0032831.1 mouse_genomes_project 7 155550869 155566144 - MGP_CBAJ_P0086908 Caly protein_coding protein_coding MGP_CBAJ_T0085701.1 MGP_CBAJ_G0032587.1 mouse_genomes_project 7 132825953 132831294 - MGP_CBAJ_P0085701 Thumpd1 protein_coding protein_coding MGP_CBAJ_T0002199.1 MGP_CBAJ_G0002114.1 mouse_genomes_project 7 61421865 61423043 - TEC TEC MGP_CBAJ_T0008810.1 MGP_CBAJ_G0007105.1 mouse_genomes_project 7 80270604 80272714 + lincRNA lincRNA MGP_CBAJ_T0084081.1 MGP_CBAJ_G0032059.1 mouse_genomes_project 7 87361034 87380925 - MGP_CBAJ_P0084081 Polg protein_coding protein_coding MGP_CBAJ_T0084082.1 MGP_CBAJ_G0032059.1 mouse_genomes_project 7 87364185 87366442 - MGP_CBAJ_P0084082 Polg protein_coding protein_coding MGP_CBAJ_T0084083.1 MGP_CBAJ_G0032059.1 mouse_genomes_project 7 87364186 87369886 - Polg protein_coding retained_intron MGP_CBAJ_T0084084.1 MGP_CBAJ_G0032059.1 mouse_genomes_project 7 87364186 87380750 - Polg protein_coding retained_intron MGP_CBAJ_T0084085.1 MGP_CBAJ_G0032059.1 mouse_genomes_project 7 87364186 87365422 - MGP_CBAJ_P0084085 Polg protein_coding protein_coding MGP_CBAJ_T0084086.1 MGP_CBAJ_G0032059.1 mouse_genomes_project 7 87364367 87380743 - MGP_CBAJ_P0084086 Polg protein_coding nonsense_mediated_decay MGP_CBAJ_T0084087.1 MGP_CBAJ_G0032059.1 mouse_genomes_project 7 87364381 87380761 - MGP_CBAJ_P0084087 Polg protein_coding nonsense_mediated_decay MGP_CBAJ_T0084088.1 MGP_CBAJ_G0032059.1 mouse_genomes_project 7 87364970 87366888 - Polg protein_coding retained_intron MGP_CBAJ_T0084089.1 MGP_CBAJ_G0032059.1 mouse_genomes_project 7 87366394 87366730 - MGP_CBAJ_P0084089 Polg protein_coding protein_coding MGP_CBAJ_T0084090.1 MGP_CBAJ_G0032059.1 mouse_genomes_project 7 87366407 87368592 - MGP_CBAJ_P0084090 Polg protein_coding protein_coding MGP_CBAJ_T0084091.1 MGP_CBAJ_G0032059.1 mouse_genomes_project 7 87366737 87369146 - Polg protein_coding retained_intron MGP_CBAJ_T0084092.1 MGP_CBAJ_G0032059.1 mouse_genomes_project 7 87368751 87370871 - Polg protein_coding retained_intron MGP_CBAJ_T0084093.1 MGP_CBAJ_G0032059.1 mouse_genomes_project 7 87369336 87370200 - Polg protein_coding retained_intron MGP_CBAJ_T0084094.1 MGP_CBAJ_G0032059.1 mouse_genomes_project 7 87370291 87374256 - MGP_CBAJ_P0084094 Polg protein_coding protein_coding MGP_CBAJ_T0084095.1 MGP_CBAJ_G0032059.1 mouse_genomes_project 7 87370875 87374611 - MGP_CBAJ_P0084095 Polg protein_coding protein_coding MGP_CBAJ_T0084096.1 MGP_CBAJ_G0032059.1 mouse_genomes_project 7 87374336 87376602 - Polg protein_coding processed_transcript MGP_CBAJ_T0084097.1 MGP_CBAJ_G0032059.1 mouse_genomes_project 7 87378478 87380757 - Polg protein_coding retained_intron MGP_CBAJ_T0084098.1 MGP_CBAJ_G0032059.1 mouse_genomes_project 7 87379457 87380633 - MGP_CBAJ_P0084098 Polg protein_coding protein_coding MGP_CBAJ_T0015657.1 MGP_CBAJ_G0013769.1 mouse_genomes_project 7 113426104 113426317 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0102150.1 MGP_CBAJ_G0040179.1 mouse_genomes_project 7 52242470 52243290 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0102100.1 MGP_CBAJ_G0040130.1 mouse_genomes_project 7 17042632 17114845 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0100756.1 MGP_CBAJ_G0039011.1 mouse_genomes_project 7 113635252 113635385 - Gm24210 snoRNA snoRNA MGP_CBAJ_T0084981.1 MGP_CBAJ_G0032280.1 mouse_genomes_project 7 113421483 113422434 + MGP_CBAJ_P0084981 Olfr549 protein_coding protein_coding MGP_CBAJ_T0084127.1 MGP_CBAJ_G0032068.1 mouse_genomes_project 7 87784164 87808790 - MGP_CBAJ_P0084127 Anpep protein_coding protein_coding MGP_CBAJ_T0084128.1 MGP_CBAJ_G0032068.1 mouse_genomes_project 7 87784165 87787861 - Anpep protein_coding retained_intron MGP_CBAJ_T0084129.1 MGP_CBAJ_G0032068.1 mouse_genomes_project 7 87784165 87802932 - MGP_CBAJ_P0084129 Anpep protein_coding protein_coding MGP_CBAJ_T0084130.1 MGP_CBAJ_G0032068.1 mouse_genomes_project 7 87784625 87808763 - MGP_CBAJ_P0084130 Anpep protein_coding protein_coding MGP_CBAJ_T0084131.1 MGP_CBAJ_G0032068.1 mouse_genomes_project 7 87802635 87821358 - MGP_CBAJ_P0084131 Anpep protein_coding protein_coding MGP_CBAJ_T0084132.1 MGP_CBAJ_G0032068.1 mouse_genomes_project 7 87803193 87808773 - Anpep protein_coding processed_transcript MGP_CBAJ_T0081040.1 MGP_CBAJ_G0031243.1 mouse_genomes_project 7 2303760 2307815 + MGP_CBAJ_P0081040 Ccdc106 protein_coding protein_coding MGP_CBAJ_T0002156.1 MGP_CBAJ_G0002071.1 mouse_genomes_project 7 534057 536310 - TEC TEC MGP_CBAJ_T0085280.1 MGP_CBAJ_G0032458.1 mouse_genomes_project 7 118749409 118750384 + MGP_CBAJ_P0085280 Olfr713 protein_coding protein_coding MGP_CBAJ_T0082974.1 MGP_CBAJ_G0031789.1 mouse_genomes_project 7 45750322 45752578 - MGP_CBAJ_P0082974 4933421I07Rik protein_coding protein_coding MGP_CBAJ_T0082975.1 MGP_CBAJ_G0031789.1 mouse_genomes_project 7 45750927 45752561 - 4933421I07Rik protein_coding retained_intron MGP_CBAJ_T0102058.1 MGP_CBAJ_G0040088.1 mouse_genomes_project 7 9588305 9589227 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0102099.1 MGP_CBAJ_G0040129.1 mouse_genomes_project 7 16796322 16802792 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0083285.1 MGP_CBAJ_G0031875.1 mouse_genomes_project 7 49219364 49225031 + MGP_CBAJ_P0083285 Pih1d1 protein_coding protein_coding MGP_CBAJ_T0083286.1 MGP_CBAJ_G0031875.1 mouse_genomes_project 7 49220901 49225031 + MGP_CBAJ_P0083286 Pih1d1 protein_coding protein_coding MGP_CBAJ_T0083942.1 MGP_CBAJ_G0032032.1 mouse_genomes_project 7 74453485 74738617 + MGP_CBAJ_P0083942 Igf1r protein_coding protein_coding MGP_CBAJ_T0087315.1 MGP_CBAJ_G0032931.1 mouse_genomes_project 7 158511696 158518387 - MGP_CBAJ_P0087315 Igf2 protein_coding protein_coding MGP_CBAJ_T0087316.1 MGP_CBAJ_G0032931.1 mouse_genomes_project 7 158511699 158523633 - MGP_CBAJ_P0087316 Igf2 protein_coding protein_coding MGP_CBAJ_T0087317.1 MGP_CBAJ_G0032931.1 mouse_genomes_project 7 158511699 158518357 - MGP_CBAJ_P0087317 Igf2 protein_coding protein_coding MGP_CBAJ_T0087318.1 MGP_CBAJ_G0032931.1 mouse_genomes_project 7 158511699 158525458 - MGP_CBAJ_P0087318 Igf2 protein_coding protein_coding MGP_CBAJ_T0087319.1 MGP_CBAJ_G0032931.1 mouse_genomes_project 7 158511773 158513924 - Igf2 protein_coding processed_transcript MGP_CBAJ_T0087320.1 MGP_CBAJ_G0032931.1 mouse_genomes_project 7 158514649 158533256 - MGP_CBAJ_P0087320 Igf2 protein_coding protein_coding MGP_CBAJ_T0087321.1 MGP_CBAJ_G0032931.1 mouse_genomes_project 7 158514942 158526023 - MGP_CBAJ_P0087321 Igf2 protein_coding protein_coding MGP_CBAJ_T0087322.1 MGP_CBAJ_G0032931.1 mouse_genomes_project 7 158515245 158516909 - MGP_CBAJ_P0087322 Igf2 protein_coding protein_coding MGP_CBAJ_T0087323.1 MGP_CBAJ_G0032931.1 mouse_genomes_project 7 158516335 158525358 - Igf2 protein_coding retained_intron MGP_CBAJ_T0102088.1 MGP_CBAJ_G0040118.1 mouse_genomes_project 7 13234054 13234264 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099491.1 MGP_CBAJ_G0037746.1 mouse_genomes_project 7 60603398 60603505 - Gm24116 snRNA snRNA MGP_CBAJ_T0015457.1 MGP_CBAJ_G0013569.1 mouse_genomes_project 7 1329652 1330525 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0082724.1 MGP_CBAJ_G0031731.1 mouse_genomes_project 7 32644655 32656120 - MGP_CBAJ_P0082724 Scn1b protein_coding protein_coding MGP_CBAJ_T0002281.1 MGP_CBAJ_G0002195.1 mouse_genomes_project 7 159028793 159029028 + TEC TEC MGP_CBAJ_T0086725.1 MGP_CBAJ_G0032787.1 mouse_genomes_project 7 147638379 147667887 + MGP_CBAJ_P0086725 Fam175b protein_coding protein_coding MGP_CBAJ_T0086726.1 MGP_CBAJ_G0032787.1 mouse_genomes_project 7 147638395 147671687 + MGP_CBAJ_P0086726 Fam175b protein_coding protein_coding MGP_CBAJ_T0086727.1 MGP_CBAJ_G0032787.1 mouse_genomes_project 7 147638407 147664552 + MGP_CBAJ_P0086727 Fam175b protein_coding nonsense_mediated_decay MGP_CBAJ_T0086728.1 MGP_CBAJ_G0032787.1 mouse_genomes_project 7 147638419 147659402 + Fam175b protein_coding retained_intron MGP_CBAJ_T0086729.1 MGP_CBAJ_G0032787.1 mouse_genomes_project 7 147638419 147671684 + MGP_CBAJ_P0086729 Fam175b protein_coding nonsense_mediated_decay MGP_CBAJ_T0086730.1 MGP_CBAJ_G0032787.1 mouse_genomes_project 7 147638477 147662285 + Fam175b protein_coding processed_transcript MGP_CBAJ_T0086731.1 MGP_CBAJ_G0032787.1 mouse_genomes_project 7 147663045 147671686 + Fam175b protein_coding retained_intron MGP_CBAJ_T0084800.1 MGP_CBAJ_G0032245.1 mouse_genomes_project 7 111437068 111503266 - MGP_CBAJ_P0084800 Arhgef17 protein_coding protein_coding MGP_CBAJ_T0084801.1 MGP_CBAJ_G0032245.1 mouse_genomes_project 7 111437098 111464957 - MGP_CBAJ_P0084801 Arhgef17 protein_coding unknown_likely_coding MGP_CBAJ_T0086270.1 MGP_CBAJ_G0032695.1 mouse_genomes_project 7 141231410 141248975 - MGP_CBAJ_P0086270 Tbc1d10b protein_coding protein_coding MGP_CBAJ_T0086271.1 MGP_CBAJ_G0032695.1 mouse_genomes_project 7 141232673 141240344 - MGP_CBAJ_P0086271 Tbc1d10b protein_coding protein_coding MGP_CBAJ_T0086272.1 MGP_CBAJ_G0032695.1 mouse_genomes_project 7 141233008 141233937 - Tbc1d10b protein_coding retained_intron MGP_CBAJ_T0086273.1 MGP_CBAJ_G0032695.1 mouse_genomes_project 7 141233313 141248254 - Tbc1d10b protein_coding processed_transcript MGP_CBAJ_T0086274.1 MGP_CBAJ_G0032695.1 mouse_genomes_project 7 141233773 141234906 - Tbc1d10b protein_coding retained_intron MGP_CBAJ_T0086275.1 MGP_CBAJ_G0032695.1 mouse_genomes_project 7 141233818 141240244 - Tbc1d10b protein_coding retained_intron MGP_CBAJ_T0086276.1 MGP_CBAJ_G0032695.1 mouse_genomes_project 7 141234204 141240285 - Tbc1d10b protein_coding retained_intron MGP_CBAJ_T0086277.1 MGP_CBAJ_G0032695.1 mouse_genomes_project 7 141239543 141240065 - Tbc1d10b protein_coding retained_intron MGP_CBAJ_T0082746.1 MGP_CBAJ_G0031739.1 mouse_genomes_project 7 35680248 35681432 + MGP_CBAJ_P0082746 Scgb1b24 protein_coding protein_coding MGP_CBAJ_T0081057.1 MGP_CBAJ_G0031253.1 mouse_genomes_project 7 3397705 3439330 + MGP_CBAJ_P0081057 Nlrp4c protein_coding protein_coding MGP_CBAJ_T0002282.1 MGP_CBAJ_G0002196.1 mouse_genomes_project 7 159032016 159032075 + TEC TEC MGP_CBAJ_T0008904.1 MGP_CBAJ_G0007162.1 mouse_genomes_project 7 134582126 134620615 + Gm45079 lincRNA lincRNA MGP_CBAJ_T0008818.1 MGP_CBAJ_G0007111.1 mouse_genomes_project 7 80849638 80850372 - Gm44738 lincRNA lincRNA MGP_CBAJ_T0102179.1 MGP_CBAJ_G0040208.1 mouse_genomes_project 7 94277498 94278373 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015689.1 MGP_CBAJ_G0013801.1 mouse_genomes_project 7 140725783 140726145 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005238.1 MGP_CBAJ_G0004436.1 mouse_genomes_project 7 159542048 159543214 + Gm15579 antisense antisense MGP_CBAJ_T0081101.1 MGP_CBAJ_G0031272.1 mouse_genomes_project 7 3990865 3991792 + MGP_CBAJ_P0081101 Olfr1350 protein_coding protein_coding MGP_CBAJ_T0085269.1 MGP_CBAJ_G0032447.1 mouse_genomes_project 7 118527711 118528671 + MGP_CBAJ_P0085269 Olfr703 protein_coding protein_coding MGP_CBAJ_T0005078.1 MGP_CBAJ_G0004320.1 mouse_genomes_project 7 19306967 19317356 + Gm20512 antisense antisense MGP_CBAJ_T0015582.1 MGP_CBAJ_G0013694.1 mouse_genomes_project 7 51154979 51155533 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0102216.1 MGP_CBAJ_G0040245.1 mouse_genomes_project 7 116382308 116384428 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0084158.1 MGP_CBAJ_G0032075.1 mouse_genomes_project 7 88268982 88281208 + MGP_CBAJ_P0084158 Gdpgp1 protein_coding protein_coding MGP_CBAJ_T0085799.1 MGP_CBAJ_G0032614.1 mouse_genomes_project 7 135013809 135084628 - MGP_CBAJ_P0085799 Usp31 protein_coding protein_coding MGP_CBAJ_T0085800.1 MGP_CBAJ_G0032614.1 mouse_genomes_project 7 135032757 135043082 - Usp31 protein_coding retained_intron MGP_CBAJ_T0005194.1 MGP_CBAJ_G0004404.1 mouse_genomes_project 7 128658210 128658782 + Sox6os antisense antisense MGP_CBAJ_T0005129.1 MGP_CBAJ_G0004358.1 mouse_genomes_project 7 47676045 47724647 - antisense antisense MGP_CBAJ_T0085402.1 MGP_CBAJ_G0032526.1 mouse_genomes_project 7 122162744 122182503 + MGP_CBAJ_P0085402 Wee1 protein_coding protein_coding MGP_CBAJ_T0015620.1 MGP_CBAJ_G0013732.1 mouse_genomes_project 7 88276159 88276416 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018139.1 MGP_CBAJ_G0015422.1 mouse_genomes_project 7 93244634 93339885 + 2610206C17Rik processed_transcript processed_transcript MGP_CBAJ_T0018140.1 MGP_CBAJ_G0015422.1 mouse_genomes_project 7 93339038 93339356 + 2610206C17Rik processed_transcript processed_transcript MGP_CBAJ_T0085079.1 MGP_CBAJ_G0032372.1 mouse_genomes_project 7 115421536 115433730 + Trim6 protein_coding retained_intron MGP_CBAJ_T0085080.1 MGP_CBAJ_G0032372.1 mouse_genomes_project 7 115421538 115440010 + MGP_CBAJ_P0085080 Trim6 protein_coding protein_coding MGP_CBAJ_T0085081.1 MGP_CBAJ_G0032372.1 mouse_genomes_project 7 115421580 115430627 + MGP_CBAJ_P0085081 Trim6 protein_coding protein_coding MGP_CBAJ_T0085082.1 MGP_CBAJ_G0032372.1 mouse_genomes_project 7 115422172 115430664 + MGP_CBAJ_P0085082 Trim6 protein_coding protein_coding MGP_CBAJ_T0085083.1 MGP_CBAJ_G0032372.1 mouse_genomes_project 7 115426068 115433027 + MGP_CBAJ_P0085083 Trim6 protein_coding protein_coding MGP_CBAJ_T0085084.1 MGP_CBAJ_G0032372.1 mouse_genomes_project 7 115430237 115437895 + MGP_CBAJ_P0085084 Trim6 protein_coding protein_coding MGP_CBAJ_T0084406.1 MGP_CBAJ_G0032129.1 mouse_genomes_project 7 93159426 93234392 - MGP_CBAJ_P0084406 Zfand6 protein_coding protein_coding MGP_CBAJ_T0084407.1 MGP_CBAJ_G0032129.1 mouse_genomes_project 7 93159426 93234402 - MGP_CBAJ_P0084407 Zfand6 protein_coding protein_coding MGP_CBAJ_T0084947.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113021910 113044695 + Pgap2 protein_coding processed_transcript MGP_CBAJ_T0084948.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113022037 113047548 + MGP_CBAJ_P0084948 Pgap2 protein_coding protein_coding MGP_CBAJ_T0084949.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113022061 113062228 + MGP_CBAJ_P0084949 Pgap2 protein_coding protein_coding MGP_CBAJ_T0084950.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113022071 113047608 + MGP_CBAJ_P0084950 Pgap2 protein_coding protein_coding MGP_CBAJ_T0084951.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113022223 113036383 + Pgap2 protein_coding processed_transcript MGP_CBAJ_T0084952.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113022234 113060123 + Pgap2 protein_coding retained_intron MGP_CBAJ_T0084953.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113043665 113059829 + MGP_CBAJ_P0084953 Pgap2 protein_coding protein_coding MGP_CBAJ_T0084954.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113043855 113060890 + MGP_CBAJ_P0084954 Pgap2 protein_coding protein_coding MGP_CBAJ_T0084955.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113044239 113062228 + MGP_CBAJ_P0084955 Pgap2 protein_coding protein_coding MGP_CBAJ_T0084956.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113044256 113060888 + MGP_CBAJ_P0084956 Pgap2 protein_coding protein_coding MGP_CBAJ_T0084957.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113044261 113061438 + MGP_CBAJ_P0084957 Pgap2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084958.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113044264 113059895 + MGP_CBAJ_P0084958 Pgap2 protein_coding protein_coding MGP_CBAJ_T0084959.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113044280 113061424 + MGP_CBAJ_P0084959 Pgap2 protein_coding protein_coding MGP_CBAJ_T0084960.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113044282 113048274 + Pgap2 protein_coding retained_intron MGP_CBAJ_T0084961.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113044283 113061324 + Pgap2 protein_coding processed_transcript MGP_CBAJ_T0084962.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113044286 113047517 + MGP_CBAJ_P0084962 Pgap2 protein_coding protein_coding MGP_CBAJ_T0084963.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113044289 113060080 + Pgap2 protein_coding retained_intron MGP_CBAJ_T0084964.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113044295 113061282 + MGP_CBAJ_P0084964 Pgap2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084965.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113044296 113061395 + MGP_CBAJ_P0084965 Pgap2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084966.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113044304 113062221 + Pgap2 protein_coding processed_transcript MGP_CBAJ_T0084967.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113044493 113059960 + MGP_CBAJ_P0084967 Pgap2 protein_coding protein_coding MGP_CBAJ_T0084968.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113046969 113059997 + MGP_CBAJ_P0084968 Pgap2 protein_coding protein_coding MGP_CBAJ_T0084969.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113046982 113061214 + MGP_CBAJ_P0084969 Pgap2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084970.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113051156 113062221 + MGP_CBAJ_P0084970 Pgap2 protein_coding protein_coding MGP_CBAJ_T0084971.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113059515 113061192 + MGP_CBAJ_P0084971 Pgap2 protein_coding protein_coding MGP_CBAJ_T0084972.1 MGP_CBAJ_G0032272.1 mouse_genomes_project 7 113059564 113061316 + Pgap2 protein_coding retained_intron MGP_CBAJ_T0083289.1 MGP_CBAJ_G0031878.1 mouse_genomes_project 7 49251148 49251992 + MGP_CBAJ_P0083289 Pth2 protein_coding protein_coding MGP_CBAJ_T0005165.1 MGP_CBAJ_G0004385.1 mouse_genomes_project 7 92067883 92103109 - Gm16638 antisense antisense MGP_CBAJ_T0008817.1 MGP_CBAJ_G0007110.1 mouse_genomes_project 7 80830681 80836370 + Gm44734 lincRNA lincRNA MGP_CBAJ_T0086369.1 MGP_CBAJ_G0032716.1 mouse_genomes_project 7 141716518 141722731 - MGP_CBAJ_P0086369 Ccdc189 protein_coding protein_coding MGP_CBAJ_T0086370.1 MGP_CBAJ_G0032716.1 mouse_genomes_project 7 141717495 141720476 - MGP_CBAJ_P0086370 Ccdc189 protein_coding protein_coding MGP_CBAJ_T0086371.1 MGP_CBAJ_G0032716.1 mouse_genomes_project 7 141717522 141719858 - Ccdc189 protein_coding retained_intron MGP_CBAJ_T0086372.1 MGP_CBAJ_G0032716.1 mouse_genomes_project 7 141719348 141722305 - Ccdc189 protein_coding retained_intron MGP_CBAJ_T0086373.1 MGP_CBAJ_G0032716.1 mouse_genomes_project 7 141721199 141722516 - Ccdc189 protein_coding retained_intron MGP_CBAJ_T0102142.1 MGP_CBAJ_G0040171.1 mouse_genomes_project 7 51689692 51690610 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081394.1 MGP_CBAJ_G0031381.1 mouse_genomes_project 7 15899985 15903587 + MGP_CBAJ_P0081394 Gng8 protein_coding protein_coding MGP_CBAJ_T0081395.1 MGP_CBAJ_G0031381.1 mouse_genomes_project 7 15900411 15903597 + MGP_CBAJ_P0081395 Gng8 protein_coding protein_coding MGP_CBAJ_T0081396.1 MGP_CBAJ_G0031381.1 mouse_genomes_project 7 15900470 15903585 + MGP_CBAJ_P0081396 Gng8 protein_coding protein_coding MGP_CBAJ_T0081397.1 MGP_CBAJ_G0031381.1 mouse_genomes_project 7 15900520 15903588 + Gng8 protein_coding processed_transcript MGP_CBAJ_T0081398.1 MGP_CBAJ_G0031381.1 mouse_genomes_project 7 15902808 15903598 + Gng8 protein_coding retained_intron MGP_CBAJ_T0081399.1 MGP_CBAJ_G0031381.1 mouse_genomes_project 7 15903106 15903525 + Gng8 protein_coding retained_intron MGP_CBAJ_T0085315.1 MGP_CBAJ_G0032486.1 mouse_genomes_project 7 120096223 120097168 - MGP_CBAJ_P0085315 protein_coding protein_coding MGP_CBAJ_T0002270.1 MGP_CBAJ_G0002184.1 mouse_genomes_project 7 141205372 141206619 - TEC TEC MGP_CBAJ_T0082513.1 MGP_CBAJ_G0031694.1 mouse_genomes_project 7 31953013 31968741 - MGP_CBAJ_P0082513 Proser3 protein_coding protein_coding MGP_CBAJ_T0082514.1 MGP_CBAJ_G0031694.1 mouse_genomes_project 7 31953087 31966174 - MGP_CBAJ_P0082514 Proser3 protein_coding protein_coding MGP_CBAJ_T0082515.1 MGP_CBAJ_G0031694.1 mouse_genomes_project 7 31956042 31968805 - Proser3 protein_coding retained_intron MGP_CBAJ_T0082516.1 MGP_CBAJ_G0031694.1 mouse_genomes_project 7 31965547 31968801 - MGP_CBAJ_P0082516 Proser3 protein_coding protein_coding MGP_CBAJ_T0018149.1 MGP_CBAJ_G0015427.1 mouse_genomes_project 7 124921051 125003447 - 2310014F06Rik processed_transcript processed_transcript MGP_CBAJ_T0010808.1 MGP_CBAJ_G0008946.1 mouse_genomes_project 7 155443953 155444025 - Mir202 miRNA miRNA MGP_CBAJ_T0082578.1 MGP_CBAJ_G0031702.1 mouse_genomes_project 7 32028072 32040775 - MGP_CBAJ_P0082578 Upk1a protein_coding protein_coding MGP_CBAJ_T0082106.1 MGP_CBAJ_G0031589.1 mouse_genomes_project 7 28331726 28396936 + MGP_CBAJ_P0082106 Akt2 protein_coding protein_coding MGP_CBAJ_T0082107.1 MGP_CBAJ_G0031589.1 mouse_genomes_project 7 28335361 28395560 + MGP_CBAJ_P0082107 Akt2 protein_coding protein_coding MGP_CBAJ_T0082108.1 MGP_CBAJ_G0031589.1 mouse_genomes_project 7 28335936 28374072 + MGP_CBAJ_P0082108 Akt2 protein_coding protein_coding MGP_CBAJ_T0082109.1 MGP_CBAJ_G0031589.1 mouse_genomes_project 7 28336026 28381439 + MGP_CBAJ_P0082109 Akt2 protein_coding protein_coding MGP_CBAJ_T0082110.1 MGP_CBAJ_G0031589.1 mouse_genomes_project 7 28337114 28361588 + Akt2 protein_coding processed_transcript MGP_CBAJ_T0082111.1 MGP_CBAJ_G0031589.1 mouse_genomes_project 7 28340464 28363475 + MGP_CBAJ_P0082111 Akt2 protein_coding protein_coding MGP_CBAJ_T0082112.1 MGP_CBAJ_G0031589.1 mouse_genomes_project 7 28349410 28374096 + MGP_CBAJ_P0082112 Akt2 protein_coding protein_coding MGP_CBAJ_T0082113.1 MGP_CBAJ_G0031589.1 mouse_genomes_project 7 28349430 28395558 + MGP_CBAJ_P0082113 Akt2 protein_coding protein_coding MGP_CBAJ_T0082114.1 MGP_CBAJ_G0031589.1 mouse_genomes_project 7 28349471 28395563 + MGP_CBAJ_P0082114 Akt2 protein_coding protein_coding MGP_CBAJ_T0082115.1 MGP_CBAJ_G0031589.1 mouse_genomes_project 7 28351361 28381419 + MGP_CBAJ_P0082115 Akt2 protein_coding protein_coding MGP_CBAJ_T0082116.1 MGP_CBAJ_G0031589.1 mouse_genomes_project 7 28351617 28363528 + MGP_CBAJ_P0082116 Akt2 protein_coding protein_coding MGP_CBAJ_T0082117.1 MGP_CBAJ_G0031589.1 mouse_genomes_project 7 28352275 28389531 + MGP_CBAJ_P0082117 Akt2 protein_coding protein_coding MGP_CBAJ_T0082118.1 MGP_CBAJ_G0031589.1 mouse_genomes_project 7 28373751 28382865 + Akt2 protein_coding retained_intron MGP_CBAJ_T0082119.1 MGP_CBAJ_G0031589.1 mouse_genomes_project 7 28386471 28387862 + Akt2 protein_coding retained_intron MGP_CBAJ_T0082212.1 MGP_CBAJ_G0031621.1 mouse_genomes_project 7 29498795 29500121 + MGP_CBAJ_P0082212 Sycn protein_coding protein_coding MGP_CBAJ_T0084463.1 MGP_CBAJ_G0032162.1 mouse_genomes_project 7 98557862 98563608 + MGP_CBAJ_P0084463 Fzd4 protein_coding protein_coding MGP_CBAJ_T0086409.1 MGP_CBAJ_G0032723.1 mouse_genomes_project 7 141942538 141947874 + MGP_CBAJ_P0086409 Orai3 protein_coding protein_coding MGP_CBAJ_T0086410.1 MGP_CBAJ_G0032723.1 mouse_genomes_project 7 141942538 141947874 + MGP_CBAJ_P0086410 Orai3 protein_coding protein_coding MGP_CBAJ_T0086411.1 MGP_CBAJ_G0032723.1 mouse_genomes_project 7 141942538 141947416 + MGP_CBAJ_P0086411 Orai3 protein_coding protein_coding MGP_CBAJ_T0083290.1 MGP_CBAJ_G0031879.1 mouse_genomes_project 7 49257105 49278198 - MGP_CBAJ_P0083290 Ccdc155 protein_coding protein_coding MGP_CBAJ_T0083291.1 MGP_CBAJ_G0031879.1 mouse_genomes_project 7 49257231 49277787 - MGP_CBAJ_P0083291 Ccdc155 protein_coding unknown_likely_coding MGP_CBAJ_T0083292.1 MGP_CBAJ_G0031879.1 mouse_genomes_project 7 49257409 49263516 - Ccdc155 protein_coding retained_intron MGP_CBAJ_T0100767.1 MGP_CBAJ_G0039022.1 mouse_genomes_project 7 131063108 131063240 + Gm25683 snoRNA snoRNA MGP_CBAJ_T0081092.1 MGP_CBAJ_G0031264.1 mouse_genomes_project 7 3810450 3851977 + MGP_CBAJ_P0081092 Gm20715 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085163.1 MGP_CBAJ_G0032422.1 mouse_genomes_project 7 116831985 116833576 - MGP_CBAJ_P0085163 Prkcdbp protein_coding protein_coding MGP_CBAJ_T0008823.1 MGP_CBAJ_G0007115.1 mouse_genomes_project 7 81078494 81088875 + lincRNA lincRNA MGP_CBAJ_T0083454.1 MGP_CBAJ_G0031918.1 mouse_genomes_project 7 49987662 50008057 + MGP_CBAJ_P0083454 Lmtk3 protein_coding protein_coding MGP_CBAJ_T0083455.1 MGP_CBAJ_G0031918.1 mouse_genomes_project 7 49987725 49994850 + MGP_CBAJ_P0083455 Lmtk3 protein_coding protein_coding MGP_CBAJ_T0083456.1 MGP_CBAJ_G0031918.1 mouse_genomes_project 7 49987871 50008022 + MGP_CBAJ_P0083456 Lmtk3 protein_coding protein_coding MGP_CBAJ_T0083457.1 MGP_CBAJ_G0031918.1 mouse_genomes_project 7 49989304 50008057 + MGP_CBAJ_P0083457 Lmtk3 protein_coding protein_coding MGP_CBAJ_T0083458.1 MGP_CBAJ_G0031918.1 mouse_genomes_project 7 49989311 49991873 + MGP_CBAJ_P0083458 Lmtk3 protein_coding protein_coding MGP_CBAJ_T0083459.1 MGP_CBAJ_G0031918.1 mouse_genomes_project 7 49989434 49991683 + Lmtk3 protein_coding retained_intron MGP_CBAJ_T0083460.1 MGP_CBAJ_G0031918.1 mouse_genomes_project 7 49990481 49996472 + MGP_CBAJ_P0083460 Lmtk3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083461.1 MGP_CBAJ_G0031918.1 mouse_genomes_project 7 49991828 49996511 + MGP_CBAJ_P0083461 Lmtk3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0005207.1 MGP_CBAJ_G0004412.1 mouse_genomes_project 7 137618679 137634394 - Gm27040 antisense antisense MGP_CBAJ_T0084570.1 MGP_CBAJ_G0032193.1 mouse_genomes_project 7 107596984 107658590 + MGP_CBAJ_P0084570 Ints4 protein_coding protein_coding MGP_CBAJ_T0084571.1 MGP_CBAJ_G0032193.1 mouse_genomes_project 7 107597031 107631808 + Ints4 protein_coding retained_intron MGP_CBAJ_T0084572.1 MGP_CBAJ_G0032193.1 mouse_genomes_project 7 107597041 107611833 + Ints4 protein_coding retained_intron MGP_CBAJ_T0084573.1 MGP_CBAJ_G0032193.1 mouse_genomes_project 7 107617655 107625427 + MGP_CBAJ_P0084573 Ints4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084574.1 MGP_CBAJ_G0032193.1 mouse_genomes_project 7 107647615 107652413 + Ints4 protein_coding retained_intron MGP_CBAJ_T0084575.1 MGP_CBAJ_G0032193.1 mouse_genomes_project 7 107652248 107658458 + Ints4 protein_coding retained_intron MGP_CBAJ_T0084576.1 MGP_CBAJ_G0032193.1 mouse_genomes_project 7 107652479 107658591 + Ints4 protein_coding retained_intron MGP_CBAJ_T0002242.1 MGP_CBAJ_G0002156.1 mouse_genomes_project 7 87888968 87891206 - TEC TEC MGP_CBAJ_T0005155.1 MGP_CBAJ_G0004378.1 mouse_genomes_project 7 87883333 87887038 + Gm26646 antisense antisense MGP_CBAJ_T0005156.1 MGP_CBAJ_G0004378.1 mouse_genomes_project 7 87885365 87887038 + Gm26646 antisense antisense MGP_CBAJ_T0005131.1 MGP_CBAJ_G0004360.1 mouse_genomes_project 7 48463237 48465801 + Gm44646 antisense antisense MGP_CBAJ_T0010718.1 MGP_CBAJ_G0008856.1 mouse_genomes_project 7 18685774 18685872 + Mir330 miRNA miRNA MGP_CBAJ_T0083593.1 MGP_CBAJ_G0031955.1 mouse_genomes_project 7 52570811 52583399 - MGP_CBAJ_P0083593 Mrgprx1 protein_coding protein_coding MGP_CBAJ_T0002191.1 MGP_CBAJ_G0002106.1 mouse_genomes_project 7 54179951 54182116 + TEC TEC MGP_CBAJ_T0082120.1 MGP_CBAJ_G0031590.1 mouse_genomes_project 7 28425495 28428927 + MGP_CBAJ_P0082120 Ttc9b protein_coding protein_coding MGP_CBAJ_T0015489.1 MGP_CBAJ_G0013601.1 mouse_genomes_project 7 12611262 12613420 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0081423.1 MGP_CBAJ_G0031389.1 mouse_genomes_project 7 16125371 16156718 + MGP_CBAJ_P0081423 Psg16 protein_coding protein_coding MGP_CBAJ_T0081424.1 MGP_CBAJ_G0031389.1 mouse_genomes_project 7 16125448 16153017 + Psg16 protein_coding retained_intron MGP_CBAJ_T0081425.1 MGP_CBAJ_G0031389.1 mouse_genomes_project 7 16145251 16151382 + MGP_CBAJ_P0081425 Psg16 protein_coding protein_coding MGP_CBAJ_T0083950.1 MGP_CBAJ_G0032037.1 mouse_genomes_project 7 79056273 79326231 - MGP_CBAJ_P0083950 Mctp2 protein_coding protein_coding MGP_CBAJ_T0083951.1 MGP_CBAJ_G0032037.1 mouse_genomes_project 7 79058856 79090957 - MGP_CBAJ_P0083951 Mctp2 protein_coding protein_coding MGP_CBAJ_T0083952.1 MGP_CBAJ_G0032037.1 mouse_genomes_project 7 79102086 79150323 - MGP_CBAJ_P0083952 Mctp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083953.1 MGP_CBAJ_G0032037.1 mouse_genomes_project 7 79234928 79238915 - Mctp2 protein_coding retained_intron MGP_CBAJ_T0083954.1 MGP_CBAJ_G0032037.1 mouse_genomes_project 7 79269512 79326231 - Mctp2 protein_coding retained_intron MGP_CBAJ_T0084125.1 MGP_CBAJ_G0032066.1 mouse_genomes_project 7 87754605 87756153 - MGP_CBAJ_P0084125 Mesp1 protein_coding protein_coding MGP_CBAJ_T0008920.1 MGP_CBAJ_G0007174.1 mouse_genomes_project 7 140824691 140839432 + Gm44854 lincRNA lincRNA MGP_CBAJ_T0085261.1 MGP_CBAJ_G0032440.1 mouse_genomes_project 7 118367469 118370083 - MGP_CBAJ_P0085261 protein_coding protein_coding MGP_CBAJ_T0102052.1 MGP_CBAJ_G0040082.1 mouse_genomes_project 7 8138079 8180287 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0008738.1 MGP_CBAJ_G0007051.1 mouse_genomes_project 7 38984130 38987873 + Gm29129 lincRNA lincRNA MGP_CBAJ_T0085439.1 MGP_CBAJ_G0032533.1 mouse_genomes_project 7 122994876 123057303 - MGP_CBAJ_P0085439 Mrvi1 protein_coding protein_coding MGP_CBAJ_T0085440.1 MGP_CBAJ_G0032533.1 mouse_genomes_project 7 122994882 123075425 - MGP_CBAJ_P0085440 Mrvi1 protein_coding protein_coding MGP_CBAJ_T0085441.1 MGP_CBAJ_G0032533.1 mouse_genomes_project 7 122997969 123075130 - MGP_CBAJ_P0085441 Mrvi1 protein_coding protein_coding MGP_CBAJ_T0085442.1 MGP_CBAJ_G0032533.1 mouse_genomes_project 7 123050691 123054603 - Mrvi1 protein_coding processed_transcript MGP_CBAJ_T0085443.1 MGP_CBAJ_G0032533.1 mouse_genomes_project 7 123055249 123057572 - Mrvi1 protein_coding retained_intron MGP_CBAJ_T0085444.1 MGP_CBAJ_G0032533.1 mouse_genomes_project 7 123057284 123111397 - MGP_CBAJ_P0085444 Mrvi1 protein_coding protein_coding MGP_CBAJ_T0082751.1 MGP_CBAJ_G0031742.1 mouse_genomes_project 7 36141218 36144706 + MGP_CBAJ_P0082751 Scgb1b30 protein_coding protein_coding MGP_CBAJ_T0002225.1 MGP_CBAJ_G0002139.1 mouse_genomes_project 7 83093909 83095210 + TEC TEC MGP_CBAJ_T0083469.1 MGP_CBAJ_G0031921.1 mouse_genomes_project 7 50029468 50035031 - MGP_CBAJ_P0083469 Grwd1 protein_coding protein_coding MGP_CBAJ_T0083470.1 MGP_CBAJ_G0031921.1 mouse_genomes_project 7 50029471 50035018 - MGP_CBAJ_P0083470 Grwd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083471.1 MGP_CBAJ_G0031921.1 mouse_genomes_project 7 50029473 50035186 - MGP_CBAJ_P0083471 Grwd1 protein_coding protein_coding MGP_CBAJ_T0083472.1 MGP_CBAJ_G0031921.1 mouse_genomes_project 7 50030304 50035123 - MGP_CBAJ_P0083472 Grwd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0015658.1 MGP_CBAJ_G0013770.1 mouse_genomes_project 7 114104448 114104749 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008882.1 MGP_CBAJ_G0007151.1 mouse_genomes_project 7 122024761 122033013 - lincRNA lincRNA MGP_CBAJ_T0008883.1 MGP_CBAJ_G0007151.1 mouse_genomes_project 7 122024789 122025619 - lincRNA lincRNA MGP_CBAJ_T0008884.1 MGP_CBAJ_G0007151.1 mouse_genomes_project 7 122024797 122192736 - lincRNA lincRNA MGP_CBAJ_T0008885.1 MGP_CBAJ_G0007151.1 mouse_genomes_project 7 122027513 122032998 - lincRNA lincRNA MGP_CBAJ_T0087386.1 MGP_CBAJ_G0032944.1 mouse_genomes_project 7 159429546 159430543 - MGP_CBAJ_P0087386 Phlda2 protein_coding protein_coding MGP_CBAJ_T0082951.1 MGP_CBAJ_G0031780.1 mouse_genomes_project 7 44557959 44573748 - MGP_CBAJ_P0082951 Vmn2r57 protein_coding protein_coding MGP_CBAJ_T0086954.1 MGP_CBAJ_G0032851.1 mouse_genomes_project 7 156028744 156035909 - MGP_CBAJ_P0086954 Olfr536 protein_coding protein_coding MGP_CBAJ_T0086562.1 MGP_CBAJ_G0032753.1 mouse_genomes_project 7 142779490 142804112 - MGP_CBAJ_P0086562 Tial1 protein_coding protein_coding MGP_CBAJ_T0086563.1 MGP_CBAJ_G0032753.1 mouse_genomes_project 7 142779938 142804092 - Tial1 protein_coding retained_intron MGP_CBAJ_T0086564.1 MGP_CBAJ_G0032753.1 mouse_genomes_project 7 142781107 142804113 - MGP_CBAJ_P0086564 Tial1 protein_coding protein_coding MGP_CBAJ_T0086565.1 MGP_CBAJ_G0032753.1 mouse_genomes_project 7 142781499 142803763 - MGP_CBAJ_P0086565 Tial1 protein_coding protein_coding MGP_CBAJ_T0086566.1 MGP_CBAJ_G0032753.1 mouse_genomes_project 7 142781913 142784610 - MGP_CBAJ_P0086566 Tial1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086567.1 MGP_CBAJ_G0032753.1 mouse_genomes_project 7 142781984 142804157 - MGP_CBAJ_P0086567 Tial1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086568.1 MGP_CBAJ_G0032753.1 mouse_genomes_project 7 142781984 142803649 - MGP_CBAJ_P0086568 Tial1 protein_coding protein_coding MGP_CBAJ_T0086569.1 MGP_CBAJ_G0032753.1 mouse_genomes_project 7 142781984 142803795 - MGP_CBAJ_P0086569 Tial1 protein_coding protein_coding MGP_CBAJ_T0086570.1 MGP_CBAJ_G0032753.1 mouse_genomes_project 7 142782015 142803786 - MGP_CBAJ_P0086570 Tial1 protein_coding protein_coding MGP_CBAJ_T0086571.1 MGP_CBAJ_G0032753.1 mouse_genomes_project 7 142783518 142788038 - MGP_CBAJ_P0086571 Tial1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086572.1 MGP_CBAJ_G0032753.1 mouse_genomes_project 7 142783993 142785410 - Tial1 protein_coding retained_intron MGP_CBAJ_T0086573.1 MGP_CBAJ_G0032753.1 mouse_genomes_project 7 142784516 142794716 - MGP_CBAJ_P0086573 Tial1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086574.1 MGP_CBAJ_G0032753.1 mouse_genomes_project 7 142786467 142788262 - Tial1 protein_coding retained_intron MGP_CBAJ_T0086575.1 MGP_CBAJ_G0032753.1 mouse_genomes_project 7 142787539 142788570 - Tial1 protein_coding retained_intron MGP_CBAJ_T0018153.1 MGP_CBAJ_G0015429.1 mouse_genomes_project 7 131183156 131184842 + 4930583K01Rik processed_transcript processed_transcript MGP_CBAJ_T0084984.1 MGP_CBAJ_G0032282.1 mouse_genomes_project 7 113448452 113449490 + MGP_CBAJ_P0084984 Olfr550 protein_coding protein_coding MGP_CBAJ_T0086836.1 MGP_CBAJ_G0032814.1 mouse_genomes_project 7 154255180 154272763 - MGP_CBAJ_P0086836 Bnip3 protein_coding protein_coding MGP_CBAJ_T0086837.1 MGP_CBAJ_G0032814.1 mouse_genomes_project 7 154257525 154272752 - Bnip3 protein_coding processed_transcript MGP_CBAJ_T0086838.1 MGP_CBAJ_G0032814.1 mouse_genomes_project 7 154257854 154261538 - Bnip3 protein_coding processed_transcript MGP_CBAJ_T0086839.1 MGP_CBAJ_G0032814.1 mouse_genomes_project 7 154261800 154272776 - Bnip3 protein_coding processed_transcript MGP_CBAJ_T0086840.1 MGP_CBAJ_G0032814.1 mouse_genomes_project 7 154261970 154272736 - Bnip3 protein_coding processed_transcript MGP_CBAJ_T0102158.1 MGP_CBAJ_G0040187.1 mouse_genomes_project 7 52744002 52745350 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0082288.1 MGP_CBAJ_G0031639.1 mouse_genomes_project 7 30108270 30133662 + MGP_CBAJ_P0082288 Map4k1 protein_coding protein_coding MGP_CBAJ_T0082289.1 MGP_CBAJ_G0031639.1 mouse_genomes_project 7 30108372 30133549 + MGP_CBAJ_P0082289 Map4k1 protein_coding unknown_likely_coding MGP_CBAJ_T0102191.1 MGP_CBAJ_G0040220.1 mouse_genomes_project 7 95162423 95163051 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0083631.1 MGP_CBAJ_G0031968.1 mouse_genomes_project 7 54529635 54544538 + MGP_CBAJ_P0083631 Htatip2 protein_coding protein_coding MGP_CBAJ_T0083632.1 MGP_CBAJ_G0031968.1 mouse_genomes_project 7 54529743 54544542 + MGP_CBAJ_P0083632 Htatip2 protein_coding unknown_likely_coding MGP_CBAJ_T0018150.1 MGP_CBAJ_G0015428.1 mouse_genomes_project 7 128736107 128745316 - 1700003G18Rik processed_transcript sense_overlapping MGP_CBAJ_T0018151.1 MGP_CBAJ_G0015428.1 mouse_genomes_project 7 128736246 128745263 - 1700003G18Rik processed_transcript sense_overlapping MGP_CBAJ_T0018152.1 MGP_CBAJ_G0015428.1 mouse_genomes_project 7 128744053 128745255 - 1700003G18Rik processed_transcript retained_intron MGP_CBAJ_T0008717.1 MGP_CBAJ_G0007031.1 mouse_genomes_project 7 26040224 26045142 + Gm26707 lincRNA lincRNA MGP_CBAJ_T0015659.1 MGP_CBAJ_G0013771.1 mouse_genomes_project 7 114118272 114118935 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0085153.1 MGP_CBAJ_G0032419.1 mouse_genomes_project 7 116716977 116720167 + MGP_CBAJ_P0085153 Gm5901 protein_coding protein_coding MGP_CBAJ_T0084150.1 MGP_CBAJ_G0032074.1 mouse_genomes_project 7 88263282 88268678 - MGP_CBAJ_P0084150 Cib1 protein_coding protein_coding MGP_CBAJ_T0084151.1 MGP_CBAJ_G0032074.1 mouse_genomes_project 7 88263290 88268742 - MGP_CBAJ_P0084151 Cib1 protein_coding protein_coding MGP_CBAJ_T0084152.1 MGP_CBAJ_G0032074.1 mouse_genomes_project 7 88263290 88268683 - MGP_CBAJ_P0084152 Cib1 protein_coding protein_coding MGP_CBAJ_T0084153.1 MGP_CBAJ_G0032074.1 mouse_genomes_project 7 88263963 88266472 - Cib1 protein_coding retained_intron MGP_CBAJ_T0084154.1 MGP_CBAJ_G0032074.1 mouse_genomes_project 7 88264284 88268715 - Cib1 protein_coding retained_intron MGP_CBAJ_T0084155.1 MGP_CBAJ_G0032074.1 mouse_genomes_project 7 88264524 88268923 - MGP_CBAJ_P0084155 Cib1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084156.1 MGP_CBAJ_G0032074.1 mouse_genomes_project 7 88267563 88268849 - Cib1 protein_coding retained_intron MGP_CBAJ_T0084157.1 MGP_CBAJ_G0032074.1 mouse_genomes_project 7 88267683 88268699 - Cib1 protein_coding retained_intron MGP_CBAJ_T0083823.1 MGP_CBAJ_G0032011.1 mouse_genomes_project 7 71044117 71050059 - MGP_CBAJ_P0083823 Ndnl2 protein_coding protein_coding MGP_CBAJ_T0087187.1 MGP_CBAJ_G0032905.1 mouse_genomes_project 7 157179308 157197787 + MGP_CBAJ_P0087187 Tspan4 protein_coding protein_coding MGP_CBAJ_T0087188.1 MGP_CBAJ_G0032905.1 mouse_genomes_project 7 157179311 157197800 + MGP_CBAJ_P0087188 Tspan4 protein_coding protein_coding MGP_CBAJ_T0087189.1 MGP_CBAJ_G0032905.1 mouse_genomes_project 7 157179534 157195604 + MGP_CBAJ_P0087189 Tspan4 protein_coding protein_coding MGP_CBAJ_T0087190.1 MGP_CBAJ_G0032905.1 mouse_genomes_project 7 157186203 157198937 + MGP_CBAJ_P0087190 Tspan4 protein_coding protein_coding MGP_CBAJ_T0087191.1 MGP_CBAJ_G0032905.1 mouse_genomes_project 7 157197472 157198944 + Tspan4 protein_coding retained_intron MGP_CBAJ_T0102162.1 MGP_CBAJ_G0040191.1 mouse_genomes_project 7 53230914 53231806 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0087341.1 MGP_CBAJ_G0032936.1 mouse_genomes_project 7 158870392 158872835 - MGP_CBAJ_P0087341 Ascl2 protein_coding protein_coding MGP_CBAJ_T0087342.1 MGP_CBAJ_G0032936.1 mouse_genomes_project 7 158870399 158872835 - MGP_CBAJ_P0087342 Ascl2 protein_coding protein_coding MGP_CBAJ_T0086022.1 MGP_CBAJ_G0032655.1 mouse_genomes_project 7 140434298 140446028 - MGP_CBAJ_P0086022 Atxn2l protein_coding protein_coding MGP_CBAJ_T0086023.1 MGP_CBAJ_G0032655.1 mouse_genomes_project 7 140434305 140445005 - MGP_CBAJ_P0086023 Atxn2l protein_coding protein_coding MGP_CBAJ_T0086024.1 MGP_CBAJ_G0032655.1 mouse_genomes_project 7 140434376 140445946 - MGP_CBAJ_P0086024 Atxn2l protein_coding protein_coding MGP_CBAJ_T0086025.1 MGP_CBAJ_G0032655.1 mouse_genomes_project 7 140434743 140435967 - MGP_CBAJ_P0086025 Atxn2l protein_coding protein_coding MGP_CBAJ_T0086026.1 MGP_CBAJ_G0032655.1 mouse_genomes_project 7 140435553 140444909 - MGP_CBAJ_P0086026 Atxn2l protein_coding protein_coding MGP_CBAJ_T0086027.1 MGP_CBAJ_G0032655.1 mouse_genomes_project 7 140441740 140444691 - MGP_CBAJ_P0086027 Atxn2l protein_coding protein_coding MGP_CBAJ_T0010744.1 MGP_CBAJ_G0008882.1 mouse_genomes_project 7 49181046 49181111 + Mir150 miRNA miRNA MGP_CBAJ_T0100733.1 MGP_CBAJ_G0038988.1 mouse_genomes_project 7 63669336 63669470 + Gm23911 snoRNA snoRNA MGP_CBAJ_T0010811.1 MGP_CBAJ_G0008949.1 mouse_genomes_project 7 157347841 157347932 + Mir7063 miRNA miRNA MGP_CBAJ_T0083275.1 MGP_CBAJ_G0031874.1 mouse_genomes_project 7 49205842 49219493 - Aldh16a1 protein_coding retained_intron MGP_CBAJ_T0083276.1 MGP_CBAJ_G0031874.1 mouse_genomes_project 7 49206063 49219540 - MGP_CBAJ_P0083276 Aldh16a1 protein_coding protein_coding MGP_CBAJ_T0083277.1 MGP_CBAJ_G0031874.1 mouse_genomes_project 7 49206993 49209848 - MGP_CBAJ_P0083277 Aldh16a1 protein_coding protein_coding MGP_CBAJ_T0083278.1 MGP_CBAJ_G0031874.1 mouse_genomes_project 7 49207603 49219551 - MGP_CBAJ_P0083278 Aldh16a1 protein_coding protein_coding MGP_CBAJ_T0083279.1 MGP_CBAJ_G0031874.1 mouse_genomes_project 7 49207937 49209882 - Aldh16a1 protein_coding processed_transcript MGP_CBAJ_T0083280.1 MGP_CBAJ_G0031874.1 mouse_genomes_project 7 49210210 49211193 - Aldh16a1 protein_coding retained_intron MGP_CBAJ_T0083281.1 MGP_CBAJ_G0031874.1 mouse_genomes_project 7 49212556 49219457 - Aldh16a1 protein_coding processed_transcript MGP_CBAJ_T0083282.1 MGP_CBAJ_G0031874.1 mouse_genomes_project 7 49212617 49219414 - Aldh16a1 protein_coding processed_transcript MGP_CBAJ_T0083283.1 MGP_CBAJ_G0031874.1 mouse_genomes_project 7 49212696 49213009 - Aldh16a1 protein_coding processed_transcript MGP_CBAJ_T0083284.1 MGP_CBAJ_G0031874.1 mouse_genomes_project 7 49213041 49214338 - Aldh16a1 protein_coding retained_intron MGP_CBAJ_T0082970.1 MGP_CBAJ_G0031786.1 mouse_genomes_project 7 45270628 45319816 - MGP_CBAJ_P0082970 Vmn2r59 protein_coding protein_coding MGP_CBAJ_T0015672.1 MGP_CBAJ_G0013784.1 mouse_genomes_project 7 127230929 127232056 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0086395.1 MGP_CBAJ_G0032720.1 mouse_genomes_project 7 141876957 141882414 + MGP_CBAJ_P0086395 Ctf1 protein_coding protein_coding MGP_CBAJ_T0086396.1 MGP_CBAJ_G0032720.1 mouse_genomes_project 7 141877158 141881552 + MGP_CBAJ_P0086396 Ctf1 protein_coding protein_coding MGP_CBAJ_T0086397.1 MGP_CBAJ_G0032720.1 mouse_genomes_project 7 141877165 141881812 + MGP_CBAJ_P0086397 Ctf1 protein_coding protein_coding MGP_CBAJ_T0086398.1 MGP_CBAJ_G0032720.1 mouse_genomes_project 7 141877521 141881248 + Ctf1 protein_coding processed_transcript MGP_CBAJ_T0086399.1 MGP_CBAJ_G0032720.1 mouse_genomes_project 7 141877778 141881261 + Ctf1 protein_coding processed_transcript MGP_CBAJ_T0099518.1 MGP_CBAJ_G0037773.1 mouse_genomes_project 7 133110765 133110866 + Gm25217 snRNA snRNA MGP_CBAJ_T0083535.1 MGP_CBAJ_G0031938.1 mouse_genomes_project 7 50994730 51025429 - MGP_CBAJ_P0083535 Saal1 protein_coding protein_coding MGP_CBAJ_T0083536.1 MGP_CBAJ_G0031938.1 mouse_genomes_project 7 50997891 51023666 - Saal1 protein_coding retained_intron MGP_CBAJ_T0083537.1 MGP_CBAJ_G0031938.1 mouse_genomes_project 7 50997926 51025390 - Saal1 protein_coding retained_intron MGP_CBAJ_T0083538.1 MGP_CBAJ_G0031938.1 mouse_genomes_project 7 50997928 50998520 - Saal1 protein_coding processed_transcript MGP_CBAJ_T0083539.1 MGP_CBAJ_G0031938.1 mouse_genomes_project 7 50999745 51025407 - Saal1 protein_coding retained_intron MGP_CBAJ_T0083540.1 MGP_CBAJ_G0031938.1 mouse_genomes_project 7 51000167 51025410 - Saal1 protein_coding retained_intron MGP_CBAJ_T0080794.1 MGP_CBAJ_G0031188.1 mouse_genomes_project 7 665902 670232 + Cnot3 protein_coding retained_intron MGP_CBAJ_T0080795.1 MGP_CBAJ_G0031188.1 mouse_genomes_project 7 665924 685841 + Cnot3 protein_coding retained_intron MGP_CBAJ_T0080796.1 MGP_CBAJ_G0031188.1 mouse_genomes_project 7 665943 672487 + MGP_CBAJ_P0080796 Cnot3 protein_coding protein_coding MGP_CBAJ_T0080797.1 MGP_CBAJ_G0031188.1 mouse_genomes_project 7 665986 685842 + MGP_CBAJ_P0080797 Cnot3 protein_coding protein_coding MGP_CBAJ_T0080798.1 MGP_CBAJ_G0031188.1 mouse_genomes_project 7 671486 683669 + MGP_CBAJ_P0080798 Cnot3 protein_coding unknown_likely_coding MGP_CBAJ_T0080799.1 MGP_CBAJ_G0031188.1 mouse_genomes_project 7 671944 676463 + MGP_CBAJ_P0080799 Cnot3 protein_coding protein_coding MGP_CBAJ_T0080800.1 MGP_CBAJ_G0031188.1 mouse_genomes_project 7 672206 681582 + MGP_CBAJ_P0080800 Cnot3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0015589.1 MGP_CBAJ_G0013701.1 mouse_genomes_project 7 61035728 61036086 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0085556.1 MGP_CBAJ_G0032558.1 mouse_genomes_project 7 128087261 128657279 - MGP_CBAJ_P0085556 Sox6 protein_coding protein_coding MGP_CBAJ_T0085557.1 MGP_CBAJ_G0032558.1 mouse_genomes_project 7 128087733 128657279 - MGP_CBAJ_P0085557 Sox6 protein_coding protein_coding MGP_CBAJ_T0085558.1 MGP_CBAJ_G0032558.1 mouse_genomes_project 7 128087733 128619393 - MGP_CBAJ_P0085558 Sox6 protein_coding protein_coding MGP_CBAJ_T0085559.1 MGP_CBAJ_G0032558.1 mouse_genomes_project 7 128087733 128685636 - MGP_CBAJ_P0085559 Sox6 protein_coding protein_coding MGP_CBAJ_T0085560.1 MGP_CBAJ_G0032558.1 mouse_genomes_project 7 128090843 128443956 - MGP_CBAJ_P0085560 Sox6 protein_coding protein_coding MGP_CBAJ_T0085561.1 MGP_CBAJ_G0032558.1 mouse_genomes_project 7 128093046 128466306 - MGP_CBAJ_P0085561 Sox6 protein_coding protein_coding MGP_CBAJ_T0085562.1 MGP_CBAJ_G0032558.1 mouse_genomes_project 7 128093046 128466341 - MGP_CBAJ_P0085562 Sox6 protein_coding protein_coding MGP_CBAJ_T0085563.1 MGP_CBAJ_G0032558.1 mouse_genomes_project 7 128093059 128619393 - MGP_CBAJ_P0085563 Sox6 protein_coding protein_coding MGP_CBAJ_T0085564.1 MGP_CBAJ_G0032558.1 mouse_genomes_project 7 128134163 128680478 - Sox6 protein_coding retained_intron MGP_CBAJ_T0085565.1 MGP_CBAJ_G0032558.1 mouse_genomes_project 7 128134597 128216265 - Sox6 protein_coding processed_transcript MGP_CBAJ_T0085566.1 MGP_CBAJ_G0032558.1 mouse_genomes_project 7 128161975 128685688 - Sox6 protein_coding retained_intron MGP_CBAJ_T0085567.1 MGP_CBAJ_G0032558.1 mouse_genomes_project 7 128205874 128290031 - MGP_CBAJ_P0085567 Sox6 protein_coding protein_coding MGP_CBAJ_T0085568.1 MGP_CBAJ_G0032558.1 mouse_genomes_project 7 128215597 128290031 - Sox6 protein_coding retained_intron MGP_CBAJ_T0085569.1 MGP_CBAJ_G0032558.1 mouse_genomes_project 7 128403877 128479870 - MGP_CBAJ_P0085569 Sox6 protein_coding protein_coding MGP_CBAJ_T0085570.1 MGP_CBAJ_G0032558.1 mouse_genomes_project 7 128428361 128681389 - Sox6 protein_coding processed_transcript MGP_CBAJ_T0085571.1 MGP_CBAJ_G0032558.1 mouse_genomes_project 7 128464373 128466352 - Sox6 protein_coding retained_intron MGP_CBAJ_T0086701.1 MGP_CBAJ_G0032781.1 mouse_genomes_project 7 146957502 147046193 - MGP_CBAJ_P0086701 Chst15 protein_coding protein_coding MGP_CBAJ_T0086702.1 MGP_CBAJ_G0032781.1 mouse_genomes_project 7 146957502 147045679 - MGP_CBAJ_P0086702 Chst15 protein_coding protein_coding MGP_CBAJ_T0086703.1 MGP_CBAJ_G0032781.1 mouse_genomes_project 7 146957530 147001373 - MGP_CBAJ_P0086703 Chst15 protein_coding unknown_likely_coding MGP_CBAJ_T0086704.1 MGP_CBAJ_G0032781.1 mouse_genomes_project 7 146997400 147007603 - Chst15 protein_coding processed_transcript MGP_CBAJ_T0008889.1 MGP_CBAJ_G0007154.1 mouse_genomes_project 7 127412089 127415317 - Gm45017 lincRNA lincRNA MGP_CBAJ_T0085760.1 MGP_CBAJ_G0032602.1 mouse_genomes_project 7 133915434 133926483 - MGP_CBAJ_P0085760 Pdzd9 protein_coding protein_coding MGP_CBAJ_T0085761.1 MGP_CBAJ_G0032602.1 mouse_genomes_project 7 133915492 133926390 - Pdzd9 protein_coding processed_transcript MGP_CBAJ_T0005206.1 MGP_CBAJ_G0004411.1 mouse_genomes_project 7 135595904 135618993 - Gm15489 antisense antisense MGP_CBAJ_T0081443.1 MGP_CBAJ_G0031403.1 mouse_genomes_project 7 17835060 17909141 - MGP_CBAJ_P0081443 protein_coding protein_coding MGP_CBAJ_T0008696.1 MGP_CBAJ_G0007014.1 mouse_genomes_project 7 1119027 1120755 + 1700095K22Rik lincRNA lincRNA MGP_CBAJ_T0081123.1 MGP_CBAJ_G0031286.1 mouse_genomes_project 7 8383552 8385284 - MGP_CBAJ_P0081123 Vmn1r69 protein_coding protein_coding MGP_CBAJ_T0081124.1 MGP_CBAJ_G0031286.1 mouse_genomes_project 7 8384485 8418002 - MGP_CBAJ_P0081124 Vmn1r69 protein_coding protein_coding MGP_CBAJ_T0081125.1 MGP_CBAJ_G0031286.1 mouse_genomes_project 7 8384485 8418002 - MGP_CBAJ_P0081125 Vmn1r69 protein_coding protein_coding MGP_CBAJ_T0018112.1 MGP_CBAJ_G0015414.1 mouse_genomes_project 7 61466984 61478028 - Gm34121 processed_transcript lincRNA MGP_CBAJ_T0018113.1 MGP_CBAJ_G0015414.1 mouse_genomes_project 7 61474445 61477993 - Gm34121 processed_transcript retained_intron MGP_CBAJ_T0098087.1 MGP_CBAJ_G0036360.1 mouse_genomes_project 7 37296733 37296852 + Gm22535 rRNA rRNA MGP_CBAJ_T0081682.1 MGP_CBAJ_G0031482.1 mouse_genomes_project 7 23852382 23853423 + MGP_CBAJ_P0081682 protein_coding protein_coding MGP_CBAJ_T0086851.1 MGP_CBAJ_G0032817.1 mouse_genomes_project 7 154474713 154585058 - MGP_CBAJ_P0086851 Stk32c protein_coding protein_coding MGP_CBAJ_T0086852.1 MGP_CBAJ_G0032817.1 mouse_genomes_project 7 154474713 154557925 - MGP_CBAJ_P0086852 Stk32c protein_coding protein_coding MGP_CBAJ_T0102207.1 MGP_CBAJ_G0040236.1 mouse_genomes_project 7 114979402 114979531 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0082593.1 MGP_CBAJ_G0031709.1 mouse_genomes_project 7 32136935 32146327 + Atp4a protein_coding retained_intron MGP_CBAJ_T0082594.1 MGP_CBAJ_G0031709.1 mouse_genomes_project 7 32136935 32150991 + MGP_CBAJ_P0082594 Atp4a protein_coding protein_coding MGP_CBAJ_T0082595.1 MGP_CBAJ_G0031709.1 mouse_genomes_project 7 32136958 32150990 + MGP_CBAJ_P0082595 Atp4a protein_coding protein_coding MGP_CBAJ_T0082596.1 MGP_CBAJ_G0031709.1 mouse_genomes_project 7 32142545 32146076 + MGP_CBAJ_P0082596 Atp4a protein_coding nonsense_mediated_decay MGP_CBAJ_T0082597.1 MGP_CBAJ_G0031709.1 mouse_genomes_project 7 32147843 32150647 + Atp4a protein_coding retained_intron MGP_CBAJ_T0087215.1 MGP_CBAJ_G0032911.1 mouse_genomes_project 7 157550763 157595295 + MGP_CBAJ_P0087215 Muc5b protein_coding protein_coding MGP_CBAJ_T0008876.1 MGP_CBAJ_G0007147.1 mouse_genomes_project 7 110202070 110203644 - F730035P03Rik lincRNA lincRNA MGP_CBAJ_T0081664.1 MGP_CBAJ_G0031467.1 mouse_genomes_project 7 19588956 19603792 - MGP_CBAJ_P0081664 Igsf23 protein_coding protein_coding MGP_CBAJ_T0002243.1 MGP_CBAJ_G0002157.1 mouse_genomes_project 7 88031433 88033400 + TEC TEC MGP_CBAJ_T0084805.1 MGP_CBAJ_G0032248.1 mouse_genomes_project 7 111719527 111918959 + MGP_CBAJ_P0084805 Fchsd2 protein_coding protein_coding MGP_CBAJ_T0084806.1 MGP_CBAJ_G0032248.1 mouse_genomes_project 7 111719528 111823923 + Fchsd2 protein_coding processed_transcript MGP_CBAJ_T0084807.1 MGP_CBAJ_G0032248.1 mouse_genomes_project 7 111719533 111918982 + MGP_CBAJ_P0084807 Fchsd2 protein_coding protein_coding MGP_CBAJ_T0084808.1 MGP_CBAJ_G0032248.1 mouse_genomes_project 7 111719557 111821166 + Fchsd2 protein_coding retained_intron MGP_CBAJ_T0084809.1 MGP_CBAJ_G0032248.1 mouse_genomes_project 7 111719632 111811832 + Fchsd2 protein_coding processed_transcript MGP_CBAJ_T0084810.1 MGP_CBAJ_G0032248.1 mouse_genomes_project 7 111719634 111754481 + Fchsd2 protein_coding retained_intron MGP_CBAJ_T0084811.1 MGP_CBAJ_G0032248.1 mouse_genomes_project 7 111866723 111882051 + Fchsd2 protein_coding retained_intron MGP_CBAJ_T0083895.1 MGP_CBAJ_G0032025.1 mouse_genomes_project 7 73109429 73202407 + MGP_CBAJ_P0083895 Cers3 protein_coding protein_coding MGP_CBAJ_T0008740.1 MGP_CBAJ_G0007053.1 mouse_genomes_project 7 39621390 39624757 - Gm28076 lincRNA lincRNA MGP_CBAJ_T0087245.1 MGP_CBAJ_G0032923.1 mouse_genomes_project 7 158156216 158168974 - Ifitm10 protein_coding processed_transcript MGP_CBAJ_T0087246.1 MGP_CBAJ_G0032923.1 mouse_genomes_project 7 158156489 158209707 - MGP_CBAJ_P0087246 Ifitm10 protein_coding protein_coding MGP_CBAJ_T0087247.1 MGP_CBAJ_G0032923.1 mouse_genomes_project 7 158156509 158209535 - Ifitm10 protein_coding processed_transcript MGP_CBAJ_T0087248.1 MGP_CBAJ_G0032923.1 mouse_genomes_project 7 158189901 158209525 - MGP_CBAJ_P0087248 Ifitm10 protein_coding protein_coding MGP_CBAJ_T0087249.1 MGP_CBAJ_G0032923.1 mouse_genomes_project 7 158190315 158211019 - MGP_CBAJ_P0087249 Ifitm10 protein_coding protein_coding MGP_CBAJ_T0087250.1 MGP_CBAJ_G0032923.1 mouse_genomes_project 7 158208408 158210147 - Ifitm10 protein_coding processed_transcript MGP_CBAJ_T0085683.1 MGP_CBAJ_G0032579.1 mouse_genomes_project 7 132212598 132254441 - MGP_CBAJ_P0085683 Gpr139 protein_coding protein_coding MGP_CBAJ_T0086253.1 MGP_CBAJ_G0032691.1 mouse_genomes_project 7 141113521 141116149 + MGP_CBAJ_P0086253 AI467606 protein_coding protein_coding MGP_CBAJ_T0086254.1 MGP_CBAJ_G0032691.1 mouse_genomes_project 7 141113586 141115156 + MGP_CBAJ_P0086254 AI467606 protein_coding protein_coding MGP_CBAJ_T0081348.1 MGP_CBAJ_G0031371.1 mouse_genomes_project 7 15381783 15408967 - MGP_CBAJ_P0081348 Npas1 protein_coding protein_coding MGP_CBAJ_T0083272.1 MGP_CBAJ_G0031871.1 mouse_genomes_project 7 49181677 49185661 - MGP_CBAJ_P0083272 Rps11 protein_coding protein_coding MGP_CBAJ_T0081249.1 MGP_CBAJ_G0031333.1 mouse_genomes_project 7 11765453 11785779 - MGP_CBAJ_P0081249 Bsph2 protein_coding protein_coding MGP_CBAJ_T0081250.1 MGP_CBAJ_G0031333.1 mouse_genomes_project 7 11765455 11785779 - MGP_CBAJ_P0081250 Bsph2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0015556.1 MGP_CBAJ_G0013668.1 mouse_genomes_project 7 44435745 44439127 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0086845.1 MGP_CBAJ_G0032816.1 mouse_genomes_project 7 154453164 154473775 + MGP_CBAJ_P0086845 Dpysl4 protein_coding protein_coding MGP_CBAJ_T0086846.1 MGP_CBAJ_G0032816.1 mouse_genomes_project 7 154453165 154461632 + Dpysl4 protein_coding processed_transcript MGP_CBAJ_T0086847.1 MGP_CBAJ_G0032816.1 mouse_genomes_project 7 154453190 154472878 + Dpysl4 protein_coding retained_intron MGP_CBAJ_T0086848.1 MGP_CBAJ_G0032816.1 mouse_genomes_project 7 154453191 154472870 + Dpysl4 protein_coding retained_intron MGP_CBAJ_T0086849.1 MGP_CBAJ_G0032816.1 mouse_genomes_project 7 154455528 154461598 + MGP_CBAJ_P0086849 Dpysl4 protein_coding protein_coding MGP_CBAJ_T0086850.1 MGP_CBAJ_G0032816.1 mouse_genomes_project 7 154456410 154472865 + MGP_CBAJ_P0086850 Dpysl4 protein_coding protein_coding MGP_CBAJ_T0008755.1 MGP_CBAJ_G0007062.1 mouse_genomes_project 7 43188683 43198094 + 4933404I11Rik lincRNA lincRNA MGP_CBAJ_T0010742.1 MGP_CBAJ_G0008880.1 mouse_genomes_project 7 48872420 48872493 + Mir707 miRNA miRNA MGP_CBAJ_T0086218.1 MGP_CBAJ_G0032683.1 mouse_genomes_project 7 140990247 141021039 - MGP_CBAJ_P0086218 Mvp protein_coding protein_coding MGP_CBAJ_T0086219.1 MGP_CBAJ_G0032683.1 mouse_genomes_project 7 141001875 141018283 - MGP_CBAJ_P0086219 Mvp protein_coding protein_coding MGP_CBAJ_T0086221.1 MGP_CBAJ_G0032683.1 mouse_genomes_project 7 141016146 141020968 - Mvp protein_coding retained_intron MGP_CBAJ_T0005226.1 MGP_CBAJ_G0004427.1 mouse_genomes_project 7 147422326 147424833 - Gm15582 antisense antisense MGP_CBAJ_T0018096.1 MGP_CBAJ_G0015409.1 mouse_genomes_project 7 49464000 49465786 + Mtag2 processed_transcript processed_transcript MGP_CBAJ_T0018097.1 MGP_CBAJ_G0015409.1 mouse_genomes_project 7 49465070 49465786 + Mtag2 processed_transcript pseudogene MGP_CBAJ_T0002238.1 MGP_CBAJ_G0002152.1 mouse_genomes_project 7 87431498 87431845 + TEC TEC MGP_CBAJ_T0085377.1 MGP_CBAJ_G0032519.1 mouse_genomes_project 7 121770966 121794478 - MGP_CBAJ_P0085377 Nrip3 protein_coding protein_coding MGP_CBAJ_T0085378.1 MGP_CBAJ_G0032519.1 mouse_genomes_project 7 121770970 121793998 - MGP_CBAJ_P0085378 Nrip3 protein_coding protein_coding MGP_CBAJ_T0083709.1 MGP_CBAJ_G0031984.1 mouse_genomes_project 7 61403027 61449452 - MGP_CBAJ_P0083709 Nipa1 protein_coding protein_coding MGP_CBAJ_T0082702.1 MGP_CBAJ_G0031729.1 mouse_genomes_project 7 32596617 32605125 - MGP_CBAJ_P0082702 Fxyd3 protein_coding protein_coding MGP_CBAJ_T0082703.1 MGP_CBAJ_G0031729.1 mouse_genomes_project 7 32598960 32600709 - Fxyd3 protein_coding retained_intron MGP_CBAJ_T0082704.1 MGP_CBAJ_G0031729.1 mouse_genomes_project 7 32598962 32605076 - Fxyd3 protein_coding retained_intron MGP_CBAJ_T0082705.1 MGP_CBAJ_G0031729.1 mouse_genomes_project 7 32598962 32599463 - Fxyd3 protein_coding retained_intron MGP_CBAJ_T0082706.1 MGP_CBAJ_G0031729.1 mouse_genomes_project 7 32598962 32599885 - Fxyd3 protein_coding retained_intron MGP_CBAJ_T0082707.1 MGP_CBAJ_G0031729.1 mouse_genomes_project 7 32598963 32605090 - MGP_CBAJ_P0082707 Fxyd3 protein_coding protein_coding MGP_CBAJ_T0082708.1 MGP_CBAJ_G0031729.1 mouse_genomes_project 7 32598964 32600471 - Fxyd3 protein_coding retained_intron MGP_CBAJ_T0082709.1 MGP_CBAJ_G0031729.1 mouse_genomes_project 7 32599309 32603373 - MGP_CBAJ_P0082709 Fxyd3 protein_coding protein_coding MGP_CBAJ_T0082710.1 MGP_CBAJ_G0031729.1 mouse_genomes_project 7 32599959 32605075 - Fxyd3 protein_coding retained_intron MGP_CBAJ_T0082711.1 MGP_CBAJ_G0031729.1 mouse_genomes_project 7 32600435 32605066 - Fxyd3 protein_coding retained_intron MGP_CBAJ_T0082712.1 MGP_CBAJ_G0031729.1 mouse_genomes_project 7 32601438 32605084 - Fxyd3 protein_coding retained_intron MGP_CBAJ_T0008768.1 MGP_CBAJ_G0007072.1 mouse_genomes_project 7 48137838 48144853 + Gm36864 lincRNA lincRNA MGP_CBAJ_T0087378.1 MGP_CBAJ_G0032942.1 mouse_genomes_project 7 159383631 159386332 - MGP_CBAJ_P0087378 Cdkn1c protein_coding protein_coding MGP_CBAJ_T0087379.1 MGP_CBAJ_G0032942.1 mouse_genomes_project 7 159383631 159386332 - MGP_CBAJ_P0087379 Cdkn1c protein_coding protein_coding MGP_CBAJ_T0083182.1 MGP_CBAJ_G0031844.1 mouse_genomes_project 7 48596197 48661981 - MGP_CBAJ_P0083182 protein_coding protein_coding MGP_CBAJ_T0011572.1 MGP_CBAJ_G0009710.1 mouse_genomes_project 7 158430508 158430579 + Gm27483 misc_RNA misc_RNA MGP_CBAJ_T0098089.1 MGP_CBAJ_G0036362.1 mouse_genomes_project 7 77583323 77583408 + Gm24880 rRNA rRNA MGP_CBAJ_T0081102.1 MGP_CBAJ_G0031273.1 mouse_genomes_project 7 4117479 4147380 - MGP_CBAJ_P0081102 Zim1 protein_coding protein_coding MGP_CBAJ_T0081103.1 MGP_CBAJ_G0031273.1 mouse_genomes_project 7 4124427 4147359 - MGP_CBAJ_P0081103 Zim1 protein_coding protein_coding MGP_CBAJ_T0081104.1 MGP_CBAJ_G0031273.1 mouse_genomes_project 7 4125343 4137093 - MGP_CBAJ_P0081104 Zim1 protein_coding protein_coding MGP_CBAJ_T0083724.1 MGP_CBAJ_G0031987.1 mouse_genomes_project 7 62218545 62942435 - MGP_CBAJ_P0083724 Gabrg3 protein_coding protein_coding MGP_CBAJ_T0083725.1 MGP_CBAJ_G0031987.1 mouse_genomes_project 7 62708372 62942118 - MGP_CBAJ_P0083725 Gabrg3 protein_coding protein_coding MGP_CBAJ_T0083726.1 MGP_CBAJ_G0031987.1 mouse_genomes_project 7 62871533 62942435 - Gabrg3 protein_coding retained_intron MGP_CBAJ_T0085010.1 MGP_CBAJ_G0032306.1 mouse_genomes_project 7 113987580 113989014 + MGP_CBAJ_P0085010 Olfr582 protein_coding protein_coding MGP_CBAJ_T0100748.1 MGP_CBAJ_G0039003.1 mouse_genomes_project 7 91388556 91388688 + Gm22934 snoRNA snoRNA MGP_CBAJ_T0084980.1 MGP_CBAJ_G0032279.1 mouse_genomes_project 7 113399458 113400403 + MGP_CBAJ_P0084980 Olfr547 protein_coding protein_coding MGP_CBAJ_T0083271.1 MGP_CBAJ_G0031870.1 mouse_genomes_project 7 49151254 49162101 - MGP_CBAJ_P0083271 Fcgrt protein_coding protein_coding MGP_CBAJ_T0015588.1 MGP_CBAJ_G0013700.1 mouse_genomes_project 7 60840926 60841472 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005139.1 MGP_CBAJ_G0004365.1 mouse_genomes_project 7 61696714 61697679 - Gm44506 antisense antisense MGP_CBAJ_T0102149.1 MGP_CBAJ_G0040178.1 mouse_genomes_project 7 52192444 52571838 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015649.1 MGP_CBAJ_G0013761.1 mouse_genomes_project 7 108700317 108700773 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0087017.1 MGP_CBAJ_G0032874.1 mouse_genomes_project 7 156620887 156622072 - MGP_CBAJ_P0087017 Ifitm3 protein_coding protein_coding MGP_CBAJ_T0082290.1 MGP_CBAJ_G0031640.1 mouse_genomes_project 7 30133721 30169529 - MGP_CBAJ_P0082290 Ryr1 protein_coding unknown_likely_coding MGP_CBAJ_T0082291.1 MGP_CBAJ_G0031640.1 mouse_genomes_project 7 30133722 30263472 - MGP_CBAJ_P0082291 Ryr1 protein_coding protein_coding MGP_CBAJ_T0082292.1 MGP_CBAJ_G0031640.1 mouse_genomes_project 7 30133726 30263472 - MGP_CBAJ_P0082292 Ryr1 protein_coding protein_coding MGP_CBAJ_T0082293.1 MGP_CBAJ_G0031640.1 mouse_genomes_project 7 30170168 30263336 - MGP_CBAJ_P0082293 Ryr1 protein_coding unknown_likely_coding MGP_CBAJ_T0085325.1 MGP_CBAJ_G0032496.1 mouse_genomes_project 7 120505138 120506071 + MGP_CBAJ_P0085325 Olfr508 protein_coding protein_coding MGP_CBAJ_T0015614.1 MGP_CBAJ_G0013726.1 mouse_genomes_project 7 82220735 82221543 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0081342.1 MGP_CBAJ_G0031367.1 mouse_genomes_project 7 15212640 15221222 + MGP_CBAJ_P0081342 Bbc3 protein_coding protein_coding MGP_CBAJ_T0081343.1 MGP_CBAJ_G0031367.1 mouse_genomes_project 7 15213396 15216700 + MGP_CBAJ_P0081343 Bbc3 protein_coding protein_coding MGP_CBAJ_T0081344.1 MGP_CBAJ_G0031367.1 mouse_genomes_project 7 15216478 15220715 + Bbc3 protein_coding processed_transcript MGP_CBAJ_T0015485.1 MGP_CBAJ_G0013597.1 mouse_genomes_project 7 12246159 12260943 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099500.1 MGP_CBAJ_G0037755.1 mouse_genomes_project 7 92697154 92697312 + Gm22177 snRNA snRNA MGP_CBAJ_T0082870.1 MGP_CBAJ_G0031765.1 mouse_genomes_project 7 37860907 37921698 + MGP_CBAJ_P0082870 Ankrd27 protein_coding protein_coding MGP_CBAJ_T0082871.1 MGP_CBAJ_G0031765.1 mouse_genomes_project 7 37860913 37876309 + MGP_CBAJ_P0082871 Ankrd27 protein_coding protein_coding MGP_CBAJ_T0082872.1 MGP_CBAJ_G0031765.1 mouse_genomes_project 7 37860913 37886480 + MGP_CBAJ_P0082872 Ankrd27 protein_coding protein_coding MGP_CBAJ_T0082873.1 MGP_CBAJ_G0031765.1 mouse_genomes_project 7 37860918 37917030 + MGP_CBAJ_P0082873 Ankrd27 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082874.1 MGP_CBAJ_G0031765.1 mouse_genomes_project 7 37860938 37878549 + MGP_CBAJ_P0082874 Ankrd27 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082875.1 MGP_CBAJ_G0031765.1 mouse_genomes_project 7 37860940 37921698 + MGP_CBAJ_P0082875 Ankrd27 protein_coding protein_coding MGP_CBAJ_T0082876.1 MGP_CBAJ_G0031765.1 mouse_genomes_project 7 37876091 37879019 + Ankrd27 protein_coding retained_intron MGP_CBAJ_T0082877.1 MGP_CBAJ_G0031765.1 mouse_genomes_project 7 37889201 37892096 + Ankrd27 protein_coding retained_intron MGP_CBAJ_T0082878.1 MGP_CBAJ_G0031765.1 mouse_genomes_project 7 37892999 37908659 + MGP_CBAJ_P0082878 Ankrd27 protein_coding protein_coding MGP_CBAJ_T0082879.1 MGP_CBAJ_G0031765.1 mouse_genomes_project 7 37899692 37907754 + MGP_CBAJ_P0082879 Ankrd27 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081371.1 MGP_CBAJ_G0031378.1 mouse_genomes_project 7 15797377 15822930 + MGP_CBAJ_P0081371 Strn4 protein_coding protein_coding MGP_CBAJ_T0081372.1 MGP_CBAJ_G0031378.1 mouse_genomes_project 7 15797806 15822926 + MGP_CBAJ_P0081372 Strn4 protein_coding protein_coding MGP_CBAJ_T0081373.1 MGP_CBAJ_G0031378.1 mouse_genomes_project 7 15797867 15810407 + MGP_CBAJ_P0081373 Strn4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081374.1 MGP_CBAJ_G0031378.1 mouse_genomes_project 7 15803542 15805788 + Strn4 protein_coding processed_transcript MGP_CBAJ_T0081375.1 MGP_CBAJ_G0031378.1 mouse_genomes_project 7 15804641 15815602 + MGP_CBAJ_P0081375 Strn4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081376.1 MGP_CBAJ_G0031378.1 mouse_genomes_project 7 15805664 15810344 + Strn4 protein_coding retained_intron MGP_CBAJ_T0081377.1 MGP_CBAJ_G0031378.1 mouse_genomes_project 7 15810371 15813232 + Strn4 protein_coding retained_intron MGP_CBAJ_T0081378.1 MGP_CBAJ_G0031378.1 mouse_genomes_project 7 15811739 15813102 + Strn4 protein_coding processed_transcript MGP_CBAJ_T0081379.1 MGP_CBAJ_G0031378.1 mouse_genomes_project 7 15812691 15819986 + MGP_CBAJ_P0081379 Strn4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081380.1 MGP_CBAJ_G0031378.1 mouse_genomes_project 7 15814241 15815618 + Strn4 protein_coding retained_intron MGP_CBAJ_T0081381.1 MGP_CBAJ_G0031378.1 mouse_genomes_project 7 15814792 15816283 + Strn4 protein_coding retained_intron MGP_CBAJ_T0081382.1 MGP_CBAJ_G0031378.1 mouse_genomes_project 7 15818214 15822930 + Strn4 protein_coding retained_intron MGP_CBAJ_T0081383.1 MGP_CBAJ_G0031378.1 mouse_genomes_project 7 15819638 15822235 + MGP_CBAJ_P0081383 Strn4 protein_coding protein_coding MGP_CBAJ_T0081384.1 MGP_CBAJ_G0031378.1 mouse_genomes_project 7 15820558 15822017 + Strn4 protein_coding retained_intron MGP_CBAJ_T0085916.1 MGP_CBAJ_G0032637.1 mouse_genomes_project 7 139249604 139269394 + MGP_CBAJ_P0085916 Kdm8 protein_coding protein_coding MGP_CBAJ_T0085917.1 MGP_CBAJ_G0032637.1 mouse_genomes_project 7 139249612 139267146 + MGP_CBAJ_P0085917 Kdm8 protein_coding protein_coding MGP_CBAJ_T0102157.1 MGP_CBAJ_G0040186.1 mouse_genomes_project 7 52671144 52672027 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0005068.1 MGP_CBAJ_G0004315.1 mouse_genomes_project 7 15556025 15581756 + Gm29443 antisense antisense MGP_CBAJ_T0005069.1 MGP_CBAJ_G0004315.1 mouse_genomes_project 7 15556242 15581855 + Gm29443 antisense antisense MGP_CBAJ_T0083718.1 MGP_CBAJ_G0031986.1 mouse_genomes_project 7 61694296 62010198 + MGP_CBAJ_P0083718 Oca2 protein_coding protein_coding MGP_CBAJ_T0083719.1 MGP_CBAJ_G0031986.1 mouse_genomes_project 7 61694297 61709403 + MGP_CBAJ_P0083719 Oca2 protein_coding protein_coding MGP_CBAJ_T0083720.1 MGP_CBAJ_G0031986.1 mouse_genomes_project 7 61694313 62009945 + MGP_CBAJ_P0083720 Oca2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083721.1 MGP_CBAJ_G0031986.1 mouse_genomes_project 7 61694317 61736225 + MGP_CBAJ_P0083721 Oca2 protein_coding protein_coding MGP_CBAJ_T0083722.1 MGP_CBAJ_G0031986.1 mouse_genomes_project 7 61694344 62010193 + MGP_CBAJ_P0083722 Oca2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083723.1 MGP_CBAJ_G0031986.1 mouse_genomes_project 7 61763844 61782211 + Oca2 protein_coding processed_transcript MGP_CBAJ_T0008880.1 MGP_CBAJ_G0007149.1 mouse_genomes_project 7 118941445 118999401 + Platr28 lincRNA lincRNA MGP_CBAJ_T0081974.1 MGP_CBAJ_G0031556.1 mouse_genomes_project 7 26658969 26704017 + MGP_CBAJ_P0081974 Cyp2a4 protein_coding protein_coding MGP_CBAJ_T0010809.1 MGP_CBAJ_G0008947.1 mouse_genomes_project 7 155476016 155476082 - Mir7062 miRNA miRNA MGP_CBAJ_T0008704.1 MGP_CBAJ_G0007020.1 mouse_genomes_project 7 18427597 18433068 - lincRNA lincRNA MGP_CBAJ_T0005095.1 MGP_CBAJ_G0004334.1 mouse_genomes_project 7 28764483 28767462 + Gm26891 antisense antisense MGP_CBAJ_T0087216.1 MGP_CBAJ_G0032912.1 mouse_genomes_project 7 157597023 157624624 - MGP_CBAJ_P0087216 Tollip protein_coding protein_coding MGP_CBAJ_T0087217.1 MGP_CBAJ_G0032912.1 mouse_genomes_project 7 157603789 157624517 - MGP_CBAJ_P0087217 Tollip protein_coding protein_coding MGP_CBAJ_T0087218.1 MGP_CBAJ_G0032912.1 mouse_genomes_project 7 157614201 157624632 - MGP_CBAJ_P0087218 Tollip protein_coding protein_coding MGP_CBAJ_T0005073.1 MGP_CBAJ_G0004318.1 mouse_genomes_project 7 18470462 18478195 - Mypopos antisense antisense MGP_CBAJ_T0005074.1 MGP_CBAJ_G0004318.1 mouse_genomes_project 7 18470781 18478222 - Mypopos antisense antisense MGP_CBAJ_T0005075.1 MGP_CBAJ_G0004318.1 mouse_genomes_project 7 18471969 18474314 - Mypopos antisense antisense MGP_CBAJ_T0005076.1 MGP_CBAJ_G0004318.1 mouse_genomes_project 7 18474323 18478206 - Mypopos antisense antisense MGP_CBAJ_T0015666.1 MGP_CBAJ_G0013778.1 mouse_genomes_project 7 118895351 118896798 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0087285.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158346341 158363516 + Tnnt3 protein_coding processed_transcript MGP_CBAJ_T0087286.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158346341 158363516 + MGP_CBAJ_P0087286 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087287.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158346341 158363516 + MGP_CBAJ_P0087287 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087288.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158346341 158363516 + MGP_CBAJ_P0087288 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087289.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158346341 158363516 + MGP_CBAJ_P0087289 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087290.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158346341 158363516 + MGP_CBAJ_P0087290 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087291.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158346341 158363516 + MGP_CBAJ_P0087291 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087292.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158346341 158363516 + MGP_CBAJ_P0087292 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087293.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158346348 158363511 + MGP_CBAJ_P0087293 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087294.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158346348 158363511 + MGP_CBAJ_P0087294 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087295.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158346348 158363511 + MGP_CBAJ_P0087295 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087296.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158346348 158363511 + MGP_CBAJ_P0087296 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087297.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158346369 158363515 + MGP_CBAJ_P0087297 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087298.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158346377 158363512 + MGP_CBAJ_P0087298 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087299.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158349122 158359044 + MGP_CBAJ_P0087299 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087300.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158349125 158360130 + MGP_CBAJ_P0087300 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087301.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158349143 158363338 + MGP_CBAJ_P0087301 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087302.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158349143 158363338 + MGP_CBAJ_P0087302 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087303.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158349143 158363338 + MGP_CBAJ_P0087303 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087304.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158349143 158363338 + MGP_CBAJ_P0087304 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087305.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158349143 158363338 + MGP_CBAJ_P0087305 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087306.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158349143 158363338 + MGP_CBAJ_P0087306 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087307.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158349143 158363338 + MGP_CBAJ_P0087307 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087308.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158349143 158363338 + MGP_CBAJ_P0087308 Tnnt3 protein_coding protein_coding MGP_CBAJ_T0087309.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158351530 158360093 + Tnnt3 protein_coding retained_intron MGP_CBAJ_T0087310.1 MGP_CBAJ_G0032929.1 mouse_genomes_project 7 158361637 158363517 + Tnnt3 protein_coding retained_intron MGP_CBAJ_T0002285.1 MGP_CBAJ_G0002199.1 mouse_genomes_project 7 159267241 159270733 - TEC TEC MGP_CBAJ_T0008733.1 MGP_CBAJ_G0007046.1 mouse_genomes_project 7 37278674 37285062 + Gm45097 lincRNA lincRNA MGP_CBAJ_T0084995.1 MGP_CBAJ_G0032293.1 mouse_genomes_project 7 113643731 113667988 - MGP_CBAJ_P0084995 Olfr78 protein_coding protein_coding MGP_CBAJ_T0084996.1 MGP_CBAJ_G0032293.1 mouse_genomes_project 7 113643731 113667988 - MGP_CBAJ_P0084996 Olfr78 protein_coding protein_coding MGP_CBAJ_T0083796.1 MGP_CBAJ_G0032005.1 mouse_genomes_project 7 70452681 70468142 + Mtmr10 protein_coding retained_intron MGP_CBAJ_T0083797.1 MGP_CBAJ_G0032005.1 mouse_genomes_project 7 70452698 70505755 + MGP_CBAJ_P0083797 Mtmr10 protein_coding protein_coding MGP_CBAJ_T0083798.1 MGP_CBAJ_G0032005.1 mouse_genomes_project 7 70452810 70502978 + MGP_CBAJ_P0083798 Mtmr10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083799.1 MGP_CBAJ_G0032005.1 mouse_genomes_project 7 70465601 70486194 + MGP_CBAJ_P0083799 Mtmr10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0102087.1 MGP_CBAJ_G0040117.1 mouse_genomes_project 7 13062167 13062662 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0082955.1 MGP_CBAJ_G0031782.1 mouse_genomes_project 7 44696186 44730303 - MGP_CBAJ_P0082955 Gm6871 protein_coding protein_coding MGP_CBAJ_T0082956.1 MGP_CBAJ_G0031782.1 mouse_genomes_project 7 44696186 44717170 - MGP_CBAJ_P0082956 Gm6871 protein_coding protein_coding MGP_CBAJ_T0082957.1 MGP_CBAJ_G0031782.1 mouse_genomes_project 7 44697124 44717136 - MGP_CBAJ_P0082957 Gm6871 protein_coding protein_coding MGP_CBAJ_T0082958.1 MGP_CBAJ_G0031782.1 mouse_genomes_project 7 44718441 44730272 - MGP_CBAJ_P0082958 Gm6871 protein_coding protein_coding MGP_CBAJ_T0081657.1 MGP_CBAJ_G0031463.1 mouse_genomes_project 7 19485696 19492024 + MGP_CBAJ_P0081657 Gm19345 protein_coding protein_coding MGP_CBAJ_T0081779.1 MGP_CBAJ_G0031509.1 mouse_genomes_project 7 24654042 24665698 - MGP_CBAJ_P0081779 Tex101 protein_coding protein_coding MGP_CBAJ_T0083416.1 MGP_CBAJ_G0031907.1 mouse_genomes_project 7 49796941 49802734 + Mamstr protein_coding retained_intron MGP_CBAJ_T0083417.1 MGP_CBAJ_G0031907.1 mouse_genomes_project 7 49796941 49797955 + Mamstr protein_coding retained_intron MGP_CBAJ_T0083418.1 MGP_CBAJ_G0031907.1 mouse_genomes_project 7 49796957 49802176 + MGP_CBAJ_P0083418 Mamstr protein_coding protein_coding MGP_CBAJ_T0083419.1 MGP_CBAJ_G0031907.1 mouse_genomes_project 7 49798444 49803486 + Mamstr protein_coding retained_intron MGP_CBAJ_T0083420.1 MGP_CBAJ_G0031907.1 mouse_genomes_project 7 49798740 49802706 + Mamstr protein_coding retained_intron MGP_CBAJ_T0083421.1 MGP_CBAJ_G0031907.1 mouse_genomes_project 7 49801348 49801974 + MGP_CBAJ_P0083421 Mamstr protein_coding protein_coding MGP_CBAJ_T0082450.1 MGP_CBAJ_G0031680.1 mouse_genomes_project 7 31683792 31704201 + MGP_CBAJ_P0082450 Clip3 protein_coding protein_coding MGP_CBAJ_T0082451.1 MGP_CBAJ_G0031680.1 mouse_genomes_project 7 31683848 31684794 + Clip3 protein_coding retained_intron MGP_CBAJ_T0082452.1 MGP_CBAJ_G0031680.1 mouse_genomes_project 7 31683849 31689288 + MGP_CBAJ_P0082452 Clip3 protein_coding protein_coding MGP_CBAJ_T0082453.1 MGP_CBAJ_G0031680.1 mouse_genomes_project 7 31683859 31689044 + MGP_CBAJ_P0082453 Clip3 protein_coding protein_coding MGP_CBAJ_T0082454.1 MGP_CBAJ_G0031680.1 mouse_genomes_project 7 31684078 31689055 + MGP_CBAJ_P0082454 Clip3 protein_coding protein_coding MGP_CBAJ_T0082455.1 MGP_CBAJ_G0031680.1 mouse_genomes_project 7 31689237 31692230 + Clip3 protein_coding processed_transcript MGP_CBAJ_T0082456.1 MGP_CBAJ_G0031680.1 mouse_genomes_project 7 31699075 31703138 + Clip3 protein_coding processed_transcript MGP_CBAJ_T0082274.1 MGP_CBAJ_G0031635.1 mouse_genomes_project 7 29935651 29937495 + MGP_CBAJ_P0082274 Lgals7 protein_coding protein_coding MGP_CBAJ_T0082275.1 MGP_CBAJ_G0031635.1 mouse_genomes_project 7 29936027 29938083 + MGP_CBAJ_P0082275 Lgals7 protein_coding protein_coding MGP_CBAJ_T0082276.1 MGP_CBAJ_G0031635.1 mouse_genomes_project 7 29936253 29936787 + Lgals7 protein_coding processed_transcript MGP_CBAJ_T0018077.1 MGP_CBAJ_G0015399.1 mouse_genomes_project 7 28132486 28133720 + Gm44924 processed_transcript processed_transcript MGP_CBAJ_T0086956.1 MGP_CBAJ_G0032853.1 mouse_genomes_project 7 156204239 156205175 + MGP_CBAJ_P0086956 Olfr61 protein_coding protein_coding MGP_CBAJ_T0008907.1 MGP_CBAJ_G0007165.1 mouse_genomes_project 7 138351944 138460931 - 3100003L05Rik lincRNA lincRNA MGP_CBAJ_T0008858.1 MGP_CBAJ_G0007132.1 mouse_genomes_project 7 92674714 92724332 + Gm26708 lincRNA lincRNA MGP_CBAJ_T0097832.1 MGP_CBAJ_G0036105.1 mouse_genomes_project 7 78209708 78210324 - pseudogene pseudogene MGP_CBAJ_T0102069.1 MGP_CBAJ_G0040099.1 mouse_genomes_project 7 10469157 10469769 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015523.1 MGP_CBAJ_G0013635.1 mouse_genomes_project 7 26577656 26580195 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0081707.1 MGP_CBAJ_G0031489.1 mouse_genomes_project 7 24124538 24139452 - MGP_CBAJ_P0081707 Zfp109 protein_coding protein_coding MGP_CBAJ_T0084433.1 MGP_CBAJ_G0032152.1 mouse_genomes_project 7 95696830 95709010 + MGP_CBAJ_P0084433 Vmn2r77 protein_coding protein_coding MGP_CBAJ_T0082725.1 MGP_CBAJ_G0031732.1 mouse_genomes_project 7 32659301 32680227 - Gramd1a protein_coding retained_intron MGP_CBAJ_T0082726.1 MGP_CBAJ_G0031732.1 mouse_genomes_project 7 32659301 32680297 - MGP_CBAJ_P0082726 Gramd1a protein_coding protein_coding MGP_CBAJ_T0082727.1 MGP_CBAJ_G0031732.1 mouse_genomes_project 7 32659301 32680229 - MGP_CBAJ_P0082727 Gramd1a protein_coding protein_coding MGP_CBAJ_T0082728.1 MGP_CBAJ_G0031732.1 mouse_genomes_project 7 32659301 32680227 - MGP_CBAJ_P0082728 Gramd1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0082729.1 MGP_CBAJ_G0031732.1 mouse_genomes_project 7 32659301 32680248 - MGP_CBAJ_P0082729 Gramd1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0082730.1 MGP_CBAJ_G0031732.1 mouse_genomes_project 7 32661483 32662489 - Gramd1a protein_coding retained_intron MGP_CBAJ_T0082731.1 MGP_CBAJ_G0031732.1 mouse_genomes_project 7 32661715 32667302 - MGP_CBAJ_P0082731 Gramd1a protein_coding protein_coding MGP_CBAJ_T0082732.1 MGP_CBAJ_G0031732.1 mouse_genomes_project 7 32661963 32672883 - MGP_CBAJ_P0082732 Gramd1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0082733.1 MGP_CBAJ_G0031732.1 mouse_genomes_project 7 32664715 32669042 - MGP_CBAJ_P0082733 Gramd1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0082734.1 MGP_CBAJ_G0031732.1 mouse_genomes_project 7 32668991 32680227 - MGP_CBAJ_P0082734 Gramd1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0082735.1 MGP_CBAJ_G0031732.1 mouse_genomes_project 7 32670198 32680168 - Gramd1a protein_coding retained_intron MGP_CBAJ_T0082736.1 MGP_CBAJ_G0031732.1 mouse_genomes_project 7 32670306 32681284 - MGP_CBAJ_P0082736 Gramd1a protein_coding protein_coding MGP_CBAJ_T0082737.1 MGP_CBAJ_G0031732.1 mouse_genomes_project 7 32671727 32685114 - MGP_CBAJ_P0082737 Gramd1a protein_coding protein_coding MGP_CBAJ_T0097835.1 MGP_CBAJ_G0036108.1 mouse_genomes_project 7 112562061 112562681 + pseudogene pseudogene MGP_CBAJ_T0015545.1 MGP_CBAJ_G0013657.1 mouse_genomes_project 7 38601989 38602964 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015600.1 MGP_CBAJ_G0013712.1 mouse_genomes_project 7 71383942 71385198 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0086870.1 MGP_CBAJ_G0032821.1 mouse_genomes_project 7 155007242 155010663 - MGP_CBAJ_P0086870 Nkx6-2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086871.1 MGP_CBAJ_G0032821.1 mouse_genomes_project 7 155009085 155010656 - MGP_CBAJ_P0086871 Nkx6-2 protein_coding protein_coding MGP_CBAJ_T0086162.1 MGP_CBAJ_G0032675.1 mouse_genomes_project 7 140844003 140856893 - MGP_CBAJ_P0086162 protein_coding protein_coding MGP_CBAJ_T0086163.1 MGP_CBAJ_G0032675.1 mouse_genomes_project 7 140844623 140857085 - MGP_CBAJ_P0086163 protein_coding protein_coding MGP_CBAJ_T0086164.1 MGP_CBAJ_G0032675.1 mouse_genomes_project 7 140844628 140857460 - MGP_CBAJ_P0086164 protein_coding protein_coding MGP_CBAJ_T0086165.1 MGP_CBAJ_G0032675.1 mouse_genomes_project 7 140845468 140857407 - MGP_CBAJ_P0086165 protein_coding protein_coding MGP_CBAJ_T0086166.1 MGP_CBAJ_G0032675.1 mouse_genomes_project 7 140845476 140857999 - protein_coding retained_intron MGP_CBAJ_T0086167.1 MGP_CBAJ_G0032675.1 mouse_genomes_project 7 140845623 140857482 - MGP_CBAJ_P0086167 protein_coding protein_coding MGP_CBAJ_T0086168.1 MGP_CBAJ_G0032675.1 mouse_genomes_project 7 140845725 140857354 - protein_coding processed_transcript MGP_CBAJ_T0086169.1 MGP_CBAJ_G0032675.1 mouse_genomes_project 7 140845861 140850774 - MGP_CBAJ_P0086169 protein_coding protein_coding MGP_CBAJ_T0086170.1 MGP_CBAJ_G0032675.1 mouse_genomes_project 7 140845938 140857983 - MGP_CBAJ_P0086170 protein_coding protein_coding MGP_CBAJ_T0086171.1 MGP_CBAJ_G0032675.1 mouse_genomes_project 7 140845973 140857405 - MGP_CBAJ_P0086171 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086172.1 MGP_CBAJ_G0032675.1 mouse_genomes_project 7 140849244 140857491 - protein_coding retained_intron MGP_CBAJ_T0086173.1 MGP_CBAJ_G0032675.1 mouse_genomes_project 7 140850719 140857413 - protein_coding processed_transcript MGP_CBAJ_T0086174.1 MGP_CBAJ_G0032675.1 mouse_genomes_project 7 140850742 140857466 - MGP_CBAJ_P0086174 protein_coding protein_coding MGP_CBAJ_T0086175.1 MGP_CBAJ_G0032675.1 mouse_genomes_project 7 140850757 140857270 - MGP_CBAJ_P0086175 protein_coding protein_coding MGP_CBAJ_T0086176.1 MGP_CBAJ_G0032675.1 mouse_genomes_project 7 140856861 140857470 - protein_coding processed_transcript MGP_CBAJ_T0082044.1 MGP_CBAJ_G0031576.1 mouse_genomes_project 7 27920530 27928884 + Numbl protein_coding processed_transcript MGP_CBAJ_T0082045.1 MGP_CBAJ_G0031576.1 mouse_genomes_project 7 27920822 27947719 + MGP_CBAJ_P0082045 Numbl protein_coding protein_coding MGP_CBAJ_T0082046.1 MGP_CBAJ_G0031576.1 mouse_genomes_project 7 27920880 27927041 + Numbl protein_coding processed_transcript MGP_CBAJ_T0082047.1 MGP_CBAJ_G0031576.1 mouse_genomes_project 7 27920903 27947722 + Numbl protein_coding retained_intron MGP_CBAJ_T0082048.1 MGP_CBAJ_G0031576.1 mouse_genomes_project 7 27923455 27947559 + Numbl protein_coding retained_intron MGP_CBAJ_T0008773.1 MGP_CBAJ_G0007076.1 mouse_genomes_project 7 56739013 56761224 - Gm29296 lincRNA lincRNA MGP_CBAJ_T0081831.1 MGP_CBAJ_G0031522.1 mouse_genomes_project 7 25099916 25173388 - MGP_CBAJ_P0081831 Grik5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081832.1 MGP_CBAJ_G0031522.1 mouse_genomes_project 7 25099916 25173633 - MGP_CBAJ_P0081832 Grik5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081833.1 MGP_CBAJ_G0031522.1 mouse_genomes_project 7 25099916 25173579 - MGP_CBAJ_P0081833 Grik5 protein_coding protein_coding MGP_CBAJ_T0081834.1 MGP_CBAJ_G0031522.1 mouse_genomes_project 7 25141262 25160721 - Grik5 protein_coding retained_intron MGP_CBAJ_T0081835.1 MGP_CBAJ_G0031522.1 mouse_genomes_project 7 25161401 25166483 - Grik5 protein_coding retained_intron MGP_CBAJ_T0081836.1 MGP_CBAJ_G0031522.1 mouse_genomes_project 7 25161586 25162284 - Grik5 protein_coding retained_intron MGP_CBAJ_T0081837.1 MGP_CBAJ_G0031522.1 mouse_genomes_project 7 25169857 25173597 - Grik5 protein_coding processed_transcript MGP_CBAJ_T0080956.1 MGP_CBAJ_G0031215.1 mouse_genomes_project 7 1830723 1859117 - MGP_CBAJ_P0080956 Hspbp1 protein_coding protein_coding MGP_CBAJ_T0080957.1 MGP_CBAJ_G0031215.1 mouse_genomes_project 7 1832338 1834808 - MGP_CBAJ_P0080957 Hspbp1 protein_coding protein_coding MGP_CBAJ_T0080958.1 MGP_CBAJ_G0031215.1 mouse_genomes_project 7 1834378 1834973 - Hspbp1 protein_coding processed_transcript MGP_CBAJ_T0080959.1 MGP_CBAJ_G0031215.1 mouse_genomes_project 7 1834785 1859043 - MGP_CBAJ_P0080959 Hspbp1 protein_coding protein_coding MGP_CBAJ_T0080960.1 MGP_CBAJ_G0031215.1 mouse_genomes_project 7 1849975 1858710 - MGP_CBAJ_P0080960 Hspbp1 protein_coding protein_coding MGP_CBAJ_T0080961.1 MGP_CBAJ_G0031215.1 mouse_genomes_project 7 1849975 1859030 - MGP_CBAJ_P0080961 Hspbp1 protein_coding protein_coding MGP_CBAJ_T0085006.1 MGP_CBAJ_G0032303.1 mouse_genomes_project 7 113886093 113887032 + MGP_CBAJ_P0085006 Olfr576 protein_coding protein_coding MGP_CBAJ_T0085007.1 MGP_CBAJ_G0032303.1 mouse_genomes_project 7 113886093 113896153 + MGP_CBAJ_P0085007 Olfr576 protein_coding protein_coding MGP_CBAJ_T0015674.1 MGP_CBAJ_G0013786.1 mouse_genomes_project 7 129194250 129194538 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0102081.1 MGP_CBAJ_G0040111.1 mouse_genomes_project 7 12970559 12971079 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099478.1 MGP_CBAJ_G0037733.1 mouse_genomes_project 7 17890524 17890631 + Gm26062 snRNA snRNA MGP_CBAJ_T0086470.1 MGP_CBAJ_G0032736.1 mouse_genomes_project 7 142134052 142138441 - MGP_CBAJ_P0086470 Prss8 protein_coding protein_coding MGP_CBAJ_T0086471.1 MGP_CBAJ_G0032736.1 mouse_genomes_project 7 142134052 142138441 - MGP_CBAJ_P0086471 Prss8 protein_coding protein_coding MGP_CBAJ_T0086472.1 MGP_CBAJ_G0032736.1 mouse_genomes_project 7 142135098 142138432 - MGP_CBAJ_P0086472 Prss8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084124.1 MGP_CBAJ_G0032065.1 mouse_genomes_project 7 87693724 87745520 + MGP_CBAJ_P0084124 Wdr93 protein_coding protein_coding MGP_CBAJ_T0086808.1 MGP_CBAJ_G0032803.1 mouse_genomes_project 7 150467284 150470533 + MGP_CBAJ_P0086808 Foxi2 protein_coding protein_coding MGP_CBAJ_T0084628.1 MGP_CBAJ_G0032202.1 mouse_genomes_project 7 108335893 108338037 - MGP_CBAJ_P0084628 Omp protein_coding protein_coding MGP_CBAJ_T0083147.1 MGP_CBAJ_G0031837.1 mouse_genomes_project 7 48463247 48499109 - MGP_CBAJ_P0083147 Mybpc2 protein_coding protein_coding MGP_CBAJ_T0083148.1 MGP_CBAJ_G0031837.1 mouse_genomes_project 7 48463380 48504387 - MGP_CBAJ_P0083148 Mybpc2 protein_coding unknown_likely_coding MGP_CBAJ_T0085271.1 MGP_CBAJ_G0032449.1 mouse_genomes_project 7 118554895 118555846 - MGP_CBAJ_P0085271 protein_coding protein_coding MGP_CBAJ_T0084870.1 MGP_CBAJ_G0032257.1 mouse_genomes_project 7 112585903 112600478 - MGP_CBAJ_P0084870 Folr1 protein_coding protein_coding MGP_CBAJ_T0084871.1 MGP_CBAJ_G0032257.1 mouse_genomes_project 7 112585903 112591728 - MGP_CBAJ_P0084871 Folr1 protein_coding protein_coding MGP_CBAJ_T0084872.1 MGP_CBAJ_G0032257.1 mouse_genomes_project 7 112585903 112600502 - MGP_CBAJ_P0084872 Folr1 protein_coding protein_coding MGP_CBAJ_T0084873.1 MGP_CBAJ_G0032257.1 mouse_genomes_project 7 112585903 112600583 - MGP_CBAJ_P0084873 Folr1 protein_coding protein_coding MGP_CBAJ_T0084874.1 MGP_CBAJ_G0032257.1 mouse_genomes_project 7 112585903 112600576 - MGP_CBAJ_P0084874 Folr1 protein_coding protein_coding MGP_CBAJ_T0084875.1 MGP_CBAJ_G0032257.1 mouse_genomes_project 7 112585903 112594954 - MGP_CBAJ_P0084875 Folr1 protein_coding protein_coding MGP_CBAJ_T0084876.1 MGP_CBAJ_G0032257.1 mouse_genomes_project 7 112586661 112599357 - MGP_CBAJ_P0084876 Folr1 protein_coding protein_coding MGP_CBAJ_T0084877.1 MGP_CBAJ_G0032257.1 mouse_genomes_project 7 112586671 112600509 - MGP_CBAJ_P0084877 Folr1 protein_coding protein_coding MGP_CBAJ_T0084878.1 MGP_CBAJ_G0032257.1 mouse_genomes_project 7 112586730 112600581 - MGP_CBAJ_P0084878 Folr1 protein_coding protein_coding MGP_CBAJ_T0084879.1 MGP_CBAJ_G0032257.1 mouse_genomes_project 7 112586963 112599130 - MGP_CBAJ_P0084879 Folr1 protein_coding protein_coding MGP_CBAJ_T0084880.1 MGP_CBAJ_G0032257.1 mouse_genomes_project 7 112591505 112600583 - MGP_CBAJ_P0084880 Folr1 protein_coding protein_coding MGP_CBAJ_T0084881.1 MGP_CBAJ_G0032257.1 mouse_genomes_project 7 112591507 112598828 - MGP_CBAJ_P0084881 Folr1 protein_coding protein_coding MGP_CBAJ_T0084882.1 MGP_CBAJ_G0032257.1 mouse_genomes_project 7 112591510 112600582 - MGP_CBAJ_P0084882 Folr1 protein_coding protein_coding MGP_CBAJ_T0084883.1 MGP_CBAJ_G0032257.1 mouse_genomes_project 7 112591543 112598476 - MGP_CBAJ_P0084883 Folr1 protein_coding protein_coding MGP_CBAJ_T0084884.1 MGP_CBAJ_G0032257.1 mouse_genomes_project 7 112591582 112599128 - MGP_CBAJ_P0084884 Folr1 protein_coding protein_coding MGP_CBAJ_T0084885.1 MGP_CBAJ_G0032257.1 mouse_genomes_project 7 112591660 112600379 - MGP_CBAJ_P0084885 Folr1 protein_coding protein_coding MGP_CBAJ_T0084886.1 MGP_CBAJ_G0032257.1 mouse_genomes_project 7 112598273 112599903 - Folr1 protein_coding processed_transcript MGP_CBAJ_T0008948.1 MGP_CBAJ_G0007191.1 mouse_genomes_project 7 147676048 147716053 - 1500002F19Rik lincRNA lincRNA MGP_CBAJ_T0015604.1 MGP_CBAJ_G0013716.1 mouse_genomes_project 7 74268061 74269066 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010753.1 MGP_CBAJ_G0008891.1 mouse_genomes_project 7 67530687 67530766 - Gm25533 miRNA miRNA MGP_CBAJ_T0018098.1 MGP_CBAJ_G0015410.1 mouse_genomes_project 7 49714773 49722136 - processed_transcript processed_transcript MGP_CBAJ_T0018099.1 MGP_CBAJ_G0015410.1 mouse_genomes_project 7 49714913 49722136 - processed_transcript processed_transcript MGP_CBAJ_T0018100.1 MGP_CBAJ_G0015410.1 mouse_genomes_project 7 49715079 49721825 - processed_transcript retained_intron MGP_CBAJ_T0018101.1 MGP_CBAJ_G0015410.1 mouse_genomes_project 7 49715102 49722306 - processed_transcript processed_transcript MGP_CBAJ_T0018102.1 MGP_CBAJ_G0015410.1 mouse_genomes_project 7 49715198 49722136 - processed_transcript processed_transcript MGP_CBAJ_T0018103.1 MGP_CBAJ_G0015410.1 mouse_genomes_project 7 49716052 49722152 - processed_transcript retained_intron MGP_CBAJ_T0018104.1 MGP_CBAJ_G0015410.1 mouse_genomes_project 7 49717126 49718017 - processed_transcript processed_transcript MGP_CBAJ_T0018105.1 MGP_CBAJ_G0015410.1 mouse_genomes_project 7 49717153 49722173 - processed_transcript processed_transcript MGP_CBAJ_T0018106.1 MGP_CBAJ_G0015410.1 mouse_genomes_project 7 49721051 49722135 - processed_transcript retained_intron MGP_CBAJ_T0083735.1 MGP_CBAJ_G0031991.1 mouse_genomes_project 7 64965442 65033552 + MGP_CBAJ_P0083735 Ube3a protein_coding protein_coding MGP_CBAJ_T0083736.1 MGP_CBAJ_G0031991.1 mouse_genomes_project 7 64965443 65044534 + MGP_CBAJ_P0083736 Ube3a protein_coding protein_coding MGP_CBAJ_T0083737.1 MGP_CBAJ_G0031991.1 mouse_genomes_project 7 64965494 64987171 + MGP_CBAJ_P0083737 Ube3a protein_coding protein_coding MGP_CBAJ_T0083738.1 MGP_CBAJ_G0031991.1 mouse_genomes_project 7 64965494 65049344 + MGP_CBAJ_P0083738 Ube3a protein_coding protein_coding MGP_CBAJ_T0083739.1 MGP_CBAJ_G0031991.1 mouse_genomes_project 7 64965494 65015223 + MGP_CBAJ_P0083739 Ube3a protein_coding protein_coding MGP_CBAJ_T0083740.1 MGP_CBAJ_G0031991.1 mouse_genomes_project 7 64965514 65031370 + Ube3a protein_coding retained_intron MGP_CBAJ_T0083741.1 MGP_CBAJ_G0031991.1 mouse_genomes_project 7 64965869 65019208 + Ube3a protein_coding processed_transcript MGP_CBAJ_T0083742.1 MGP_CBAJ_G0031991.1 mouse_genomes_project 7 64965917 64987514 + Ube3a protein_coding processed_transcript MGP_CBAJ_T0083743.1 MGP_CBAJ_G0031991.1 mouse_genomes_project 7 64965975 65019471 + MGP_CBAJ_P0083743 Ube3a protein_coding protein_coding MGP_CBAJ_T0083744.1 MGP_CBAJ_G0031991.1 mouse_genomes_project 7 64982843 65015133 + MGP_CBAJ_P0083744 Ube3a protein_coding protein_coding MGP_CBAJ_T0083745.1 MGP_CBAJ_G0031991.1 mouse_genomes_project 7 65020054 65024130 + Ube3a protein_coding retained_intron MGP_CBAJ_T0083746.1 MGP_CBAJ_G0031991.1 mouse_genomes_project 7 65026330 65029678 + Ube3a protein_coding retained_intron MGP_CBAJ_T0083747.1 MGP_CBAJ_G0031991.1 mouse_genomes_project 7 65030093 65042739 + MGP_CBAJ_P0083747 Ube3a protein_coding protein_coding MGP_CBAJ_T0083748.1 MGP_CBAJ_G0031991.1 mouse_genomes_project 7 65030849 65042749 + MGP_CBAJ_P0083748 Ube3a protein_coding protein_coding MGP_CBAJ_T0083749.1 MGP_CBAJ_G0031991.1 mouse_genomes_project 7 65041317 65042751 + Ube3a protein_coding retained_intron MGP_CBAJ_T0084466.1 MGP_CBAJ_G0032165.1 mouse_genomes_project 7 98800579 98977741 + protein_coding retained_intron MGP_CBAJ_T0084467.1 MGP_CBAJ_G0032165.1 mouse_genomes_project 7 98800595 99025485 + MGP_CBAJ_P0084467 protein_coding unknown_likely_coding MGP_CBAJ_T0084468.1 MGP_CBAJ_G0032165.1 mouse_genomes_project 7 98800721 98811352 + protein_coding processed_transcript MGP_CBAJ_T0084469.1 MGP_CBAJ_G0032165.1 mouse_genomes_project 7 98801073 99020219 + protein_coding retained_intron MGP_CBAJ_T0084470.1 MGP_CBAJ_G0032165.1 mouse_genomes_project 7 98903296 98996771 + protein_coding processed_transcript MGP_CBAJ_T0084471.1 MGP_CBAJ_G0032165.1 mouse_genomes_project 7 99000372 99023030 + MGP_CBAJ_P0084471 protein_coding protein_coding MGP_CBAJ_T0084637.1 MGP_CBAJ_G0032205.1 mouse_genomes_project 7 108566651 108577148 - MGP_CBAJ_P0084637 Tsku protein_coding protein_coding MGP_CBAJ_T0084638.1 MGP_CBAJ_G0032205.1 mouse_genomes_project 7 108566651 108577188 - MGP_CBAJ_P0084638 Tsku protein_coding protein_coding MGP_CBAJ_T0084639.1 MGP_CBAJ_G0032205.1 mouse_genomes_project 7 108566651 108577148 - MGP_CBAJ_P0084639 Tsku protein_coding protein_coding MGP_CBAJ_T0084640.1 MGP_CBAJ_G0032205.1 mouse_genomes_project 7 108566651 108577152 - MGP_CBAJ_P0084640 Tsku protein_coding protein_coding MGP_CBAJ_T0084641.1 MGP_CBAJ_G0032205.1 mouse_genomes_project 7 108566769 108575939 - MGP_CBAJ_P0084641 Tsku protein_coding protein_coding MGP_CBAJ_T0084642.1 MGP_CBAJ_G0032205.1 mouse_genomes_project 7 108566769 108575939 - MGP_CBAJ_P0084642 Tsku protein_coding protein_coding MGP_CBAJ_T0084643.1 MGP_CBAJ_G0032205.1 mouse_genomes_project 7 108566851 108577148 - MGP_CBAJ_P0084643 Tsku protein_coding protein_coding MGP_CBAJ_T0084644.1 MGP_CBAJ_G0032205.1 mouse_genomes_project 7 108569437 108576047 - Tsku protein_coding processed_transcript MGP_CBAJ_T0101374.1 MGP_CBAJ_G0039445.1 mouse_genomes_project 7 30780590 30809341 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101375.1 MGP_CBAJ_G0039445.1 mouse_genomes_project 7 30782526 30802983 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0010722.1 MGP_CBAJ_G0008860.1 mouse_genomes_project 7 25052460 25052526 - Mir7046 miRNA miRNA MGP_CBAJ_T0082489.1 MGP_CBAJ_G0031686.1 mouse_genomes_project 7 31807626 31811388 + MGP_CBAJ_P0082489 Tyrobp protein_coding protein_coding MGP_CBAJ_T0083258.1 MGP_CBAJ_G0031864.1 mouse_genomes_project 7 49051126 49062476 - Scaf1 protein_coding retained_intron MGP_CBAJ_T0083259.1 MGP_CBAJ_G0031864.1 mouse_genomes_project 7 49051126 49064866 - MGP_CBAJ_P0083259 Scaf1 protein_coding protein_coding MGP_CBAJ_T0083260.1 MGP_CBAJ_G0031864.1 mouse_genomes_project 7 49051126 49062907 - MGP_CBAJ_P0083260 Scaf1 protein_coding protein_coding MGP_CBAJ_T0083261.1 MGP_CBAJ_G0031864.1 mouse_genomes_project 7 49058385 49064634 - Scaf1 protein_coding processed_transcript MGP_CBAJ_T0083262.1 MGP_CBAJ_G0031864.1 mouse_genomes_project 7 49060660 49062064 - Scaf1 protein_coding retained_intron MGP_CBAJ_T0083263.1 MGP_CBAJ_G0031864.1 mouse_genomes_project 7 49061754 49064360 - MGP_CBAJ_P0083263 Scaf1 protein_coding protein_coding MGP_CBAJ_T0083264.1 MGP_CBAJ_G0031864.1 mouse_genomes_project 7 49062706 49063439 - Scaf1 protein_coding processed_transcript MGP_CBAJ_T0083415.1 MGP_CBAJ_G0031906.1 mouse_genomes_project 7 49784572 49796058 + MGP_CBAJ_P0083415 Rasip1 protein_coding protein_coding MGP_CBAJ_T0008874.1 MGP_CBAJ_G0007146.1 mouse_genomes_project 7 110008876 110012079 + Gm10605 lincRNA lincRNA MGP_CBAJ_T0008875.1 MGP_CBAJ_G0007146.1 mouse_genomes_project 7 110009079 110014657 + Gm10605 lincRNA lincRNA MGP_CBAJ_T0010779.1 MGP_CBAJ_G0008917.1 mouse_genomes_project 7 87423902 87423992 + Mir9-3 miRNA miRNA MGP_CBAJ_T0082325.1 MGP_CBAJ_G0031646.1 mouse_genomes_project 7 30347916 30370024 - MGP_CBAJ_P0082325 protein_coding protein_coding MGP_CBAJ_T0081897.1 MGP_CBAJ_G0031537.1 mouse_genomes_project 7 25656624 25676147 - MGP_CBAJ_P0081897 Ceacam1 protein_coding protein_coding MGP_CBAJ_T0081898.1 MGP_CBAJ_G0031537.1 mouse_genomes_project 7 25657430 25676134 - MGP_CBAJ_P0081898 Ceacam1 protein_coding protein_coding MGP_CBAJ_T0081899.1 MGP_CBAJ_G0031537.1 mouse_genomes_project 7 25658345 25676138 - Ceacam1 protein_coding retained_intron MGP_CBAJ_T0081900.1 MGP_CBAJ_G0031537.1 mouse_genomes_project 7 25658800 25676125 - MGP_CBAJ_P0081900 Ceacam1 protein_coding protein_coding MGP_CBAJ_T0081901.1 MGP_CBAJ_G0031537.1 mouse_genomes_project 7 25658800 25676095 - MGP_CBAJ_P0081901 Ceacam1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081902.1 MGP_CBAJ_G0031537.1 mouse_genomes_project 7 25659457 25676134 - MGP_CBAJ_P0081902 Ceacam1 protein_coding protein_coding MGP_CBAJ_T0081903.1 MGP_CBAJ_G0031537.1 mouse_genomes_project 7 25666577 25672026 - Ceacam1 protein_coding retained_intron MGP_CBAJ_T0081904.1 MGP_CBAJ_G0031537.1 mouse_genomes_project 7 25666578 25676144 - Ceacam1 protein_coding retained_intron MGP_CBAJ_T0083980.1 MGP_CBAJ_G0032042.1 mouse_genomes_project 7 81561030 81873812 - MGP_CBAJ_P0083980 Slco3a1 protein_coding protein_coding MGP_CBAJ_T0083981.1 MGP_CBAJ_G0032042.1 mouse_genomes_project 7 81567481 81873793 - MGP_CBAJ_P0083981 Slco3a1 protein_coding protein_coding MGP_CBAJ_T0083982.1 MGP_CBAJ_G0032042.1 mouse_genomes_project 7 81581011 81873959 - MGP_CBAJ_P0083982 Slco3a1 protein_coding protein_coding MGP_CBAJ_T0083983.1 MGP_CBAJ_G0032042.1 mouse_genomes_project 7 81619751 81636896 - Slco3a1 protein_coding retained_intron MGP_CBAJ_T0083984.1 MGP_CBAJ_G0032042.1 mouse_genomes_project 7 81636450 81873659 - MGP_CBAJ_P0083984 Slco3a1 protein_coding protein_coding MGP_CBAJ_T0083985.1 MGP_CBAJ_G0032042.1 mouse_genomes_project 7 81656282 81819575 - Slco3a1 protein_coding retained_intron MGP_CBAJ_T0083986.1 MGP_CBAJ_G0032042.1 mouse_genomes_project 7 81819478 81871779 - MGP_CBAJ_P0083986 Slco3a1 protein_coding protein_coding MGP_CBAJ_T0083987.1 MGP_CBAJ_G0032042.1 mouse_genomes_project 7 81819625 81847281 - Slco3a1 protein_coding processed_transcript MGP_CBAJ_T0085001.1 MGP_CBAJ_G0032298.1 mouse_genomes_project 7 113815943 113816988 + MGP_CBAJ_P0085001 Olfr570 protein_coding protein_coding MGP_CBAJ_T0102205.1 MGP_CBAJ_G0040234.1 mouse_genomes_project 7 114756077 114756362 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0087436.1 MGP_CBAJ_G0032957.1 mouse_genomes_project 7 160494986 160533306 - MGP_CBAJ_P0087436 Cttn protein_coding protein_coding MGP_CBAJ_T0087437.1 MGP_CBAJ_G0032957.1 mouse_genomes_project 7 160494988 160533570 - MGP_CBAJ_P0087437 Cttn protein_coding protein_coding MGP_CBAJ_T0087438.1 MGP_CBAJ_G0032957.1 mouse_genomes_project 7 160499297 160500754 - Cttn protein_coding retained_intron MGP_CBAJ_T0087439.1 MGP_CBAJ_G0032957.1 mouse_genomes_project 7 160501211 160512188 - Cttn protein_coding retained_intron MGP_CBAJ_T0087440.1 MGP_CBAJ_G0032957.1 mouse_genomes_project 7 160502444 160508323 - Cttn protein_coding processed_transcript MGP_CBAJ_T0087441.1 MGP_CBAJ_G0032957.1 mouse_genomes_project 7 160508220 160515001 - Cttn protein_coding processed_transcript MGP_CBAJ_T0087442.1 MGP_CBAJ_G0032957.1 mouse_genomes_project 7 160518877 160523187 - Cttn protein_coding processed_transcript MGP_CBAJ_T0084365.1 MGP_CBAJ_G0032115.1 mouse_genomes_project 7 91234258 91238300 + MGP_CBAJ_P0084365 Mex3b protein_coding protein_coding MGP_CBAJ_T0087397.1 MGP_CBAJ_G0032947.1 mouse_genomes_project 7 159554838 159574936 - MGP_CBAJ_P0087397 Tnfrsf26 protein_coding protein_coding MGP_CBAJ_T0081760.1 MGP_CBAJ_G0031504.1 mouse_genomes_project 7 24517231 24547465 + MGP_CBAJ_P0081760 Xrcc1 protein_coding protein_coding MGP_CBAJ_T0081761.1 MGP_CBAJ_G0031504.1 mouse_genomes_project 7 24518096 24547468 + MGP_CBAJ_P0081761 Xrcc1 protein_coding protein_coding MGP_CBAJ_T0081762.1 MGP_CBAJ_G0031504.1 mouse_genomes_project 7 24518144 24534687 + Xrcc1 protein_coding retained_intron MGP_CBAJ_T0081763.1 MGP_CBAJ_G0031504.1 mouse_genomes_project 7 24518147 24523192 + Xrcc1 protein_coding processed_transcript MGP_CBAJ_T0081764.1 MGP_CBAJ_G0031504.1 mouse_genomes_project 7 24518227 24519509 + Xrcc1 protein_coding retained_intron MGP_CBAJ_T0081765.1 MGP_CBAJ_G0031504.1 mouse_genomes_project 7 24518275 24541003 + Xrcc1 protein_coding retained_intron MGP_CBAJ_T0081766.1 MGP_CBAJ_G0031504.1 mouse_genomes_project 7 24539629 24541604 + Xrcc1 protein_coding retained_intron MGP_CBAJ_T0081767.1 MGP_CBAJ_G0031504.1 mouse_genomes_project 7 24541425 24544732 + Xrcc1 protein_coding retained_intron MGP_CBAJ_T0081768.1 MGP_CBAJ_G0031504.1 mouse_genomes_project 7 24543763 24544750 + Xrcc1 protein_coding retained_intron MGP_CBAJ_T0081769.1 MGP_CBAJ_G0031504.1 mouse_genomes_project 7 24543921 24544966 + Xrcc1 protein_coding retained_intron MGP_CBAJ_T0081770.1 MGP_CBAJ_G0031504.1 mouse_genomes_project 7 24544601 24547470 + Xrcc1 protein_coding processed_transcript MGP_CBAJ_T0081771.1 MGP_CBAJ_G0031504.1 mouse_genomes_project 7 24545753 24547464 + Xrcc1 protein_coding retained_intron MGP_CBAJ_T0081772.1 MGP_CBAJ_G0031504.1 mouse_genomes_project 7 24546265 24547464 + Xrcc1 protein_coding processed_transcript MGP_CBAJ_T0015639.1 MGP_CBAJ_G0013751.1 mouse_genomes_project 7 105390463 105390829 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0087387.1 MGP_CBAJ_G0032945.1 mouse_genomes_project 7 159446629 159482355 - MGP_CBAJ_P0087387 Nap1l4 protein_coding protein_coding MGP_CBAJ_T0082979.1 MGP_CBAJ_G0031791.1 mouse_genomes_project 7 46116206 46116329 - MGP_CBAJ_P0082979 protein_coding protein_coding MGP_CBAJ_T0010720.1 MGP_CBAJ_G0008858.1 mouse_genomes_project 7 23070846 23070951 + Gm25196 miRNA miRNA MGP_CBAJ_T0086974.1 MGP_CBAJ_G0032864.1 mouse_genomes_project 7 156458082 156461075 - MGP_CBAJ_P0086974 Bet1l protein_coding protein_coding MGP_CBAJ_T0087020.1 MGP_CBAJ_G0032877.1 mouse_genomes_project 7 156689593 156700322 + MGP_CBAJ_P0087020 B4galnt4 protein_coding protein_coding MGP_CBAJ_T0015626.1 MGP_CBAJ_G0013738.1 mouse_genomes_project 7 91358002 91358320 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0080950.1 MGP_CBAJ_G0031214.1 mouse_genomes_project 7 1797329 1829214 - MGP_CBAJ_P0080950 Ppp6r1 protein_coding protein_coding MGP_CBAJ_T0080951.1 MGP_CBAJ_G0031214.1 mouse_genomes_project 7 1803422 1808842 - Ppp6r1 protein_coding retained_intron MGP_CBAJ_T0080952.1 MGP_CBAJ_G0031214.1 mouse_genomes_project 7 1809236 1829185 - Ppp6r1 protein_coding retained_intron MGP_CBAJ_T0080953.1 MGP_CBAJ_G0031214.1 mouse_genomes_project 7 1809974 1814912 - MGP_CBAJ_P0080953 Ppp6r1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080954.1 MGP_CBAJ_G0031214.1 mouse_genomes_project 7 1810815 1819038 - MGP_CBAJ_P0080954 Ppp6r1 protein_coding protein_coding MGP_CBAJ_T0080955.1 MGP_CBAJ_G0031214.1 mouse_genomes_project 7 1814864 1829176 - MGP_CBAJ_P0080955 Ppp6r1 protein_coding protein_coding MGP_CBAJ_T0008700.1 MGP_CBAJ_G0007017.1 mouse_genomes_project 7 15560827 15565637 - lincRNA lincRNA MGP_CBAJ_T0084684.1 MGP_CBAJ_G0032216.1 mouse_genomes_project 7 109723506 109806098 + MGP_CBAJ_P0084684 Gdpd5 protein_coding protein_coding MGP_CBAJ_T0084685.1 MGP_CBAJ_G0032216.1 mouse_genomes_project 7 109723663 109806959 + MGP_CBAJ_P0084685 Gdpd5 protein_coding unknown_likely_coding MGP_CBAJ_T0081775.1 MGP_CBAJ_G0031507.1 mouse_genomes_project 7 24582135 24609773 + MGP_CBAJ_P0081775 Phldb3 protein_coding unknown_likely_coding MGP_CBAJ_T0081776.1 MGP_CBAJ_G0031507.1 mouse_genomes_project 7 24596150 24607439 + Phldb3 protein_coding retained_intron MGP_CBAJ_T0081777.1 MGP_CBAJ_G0031507.1 mouse_genomes_project 7 24596552 24599441 + Phldb3 protein_coding processed_transcript MGP_CBAJ_T0008812.1 MGP_CBAJ_G0007107.1 mouse_genomes_project 7 80338753 80342024 + Gm44670 lincRNA lincRNA MGP_CBAJ_T0008813.1 MGP_CBAJ_G0007107.1 mouse_genomes_project 7 80338812 80342459 + Gm44670 lincRNA lincRNA MGP_CBAJ_T0102169.1 MGP_CBAJ_G0040198.1 mouse_genomes_project 7 93624682 93625202 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081352.1 MGP_CBAJ_G0031374.1 mouse_genomes_project 7 15687850 15693233 + MGP_CBAJ_P0081352 Ceacam9 protein_coding protein_coding MGP_CBAJ_T0081353.1 MGP_CBAJ_G0031374.1 mouse_genomes_project 7 15687879 15692316 + MGP_CBAJ_P0081353 Ceacam9 protein_coding protein_coding MGP_CBAJ_T0085379.1 MGP_CBAJ_G0032520.1 mouse_genomes_project 7 121812687 121878594 - MGP_CBAJ_P0085379 Scube2 protein_coding protein_coding MGP_CBAJ_T0085380.1 MGP_CBAJ_G0032520.1 mouse_genomes_project 7 121812687 121878687 - MGP_CBAJ_P0085380 Scube2 protein_coding protein_coding MGP_CBAJ_T0085381.1 MGP_CBAJ_G0032520.1 mouse_genomes_project 7 121812819 121878651 - MGP_CBAJ_P0085381 Scube2 protein_coding protein_coding MGP_CBAJ_T0085382.1 MGP_CBAJ_G0032520.1 mouse_genomes_project 7 121813075 121854921 - Scube2 protein_coding processed_transcript MGP_CBAJ_T0085383.1 MGP_CBAJ_G0032520.1 mouse_genomes_project 7 121814631 121822213 - Scube2 protein_coding processed_transcript MGP_CBAJ_T0011575.1 MGP_CBAJ_G0009713.1 mouse_genomes_project 7 159189843 159190038 + Gm27389 misc_RNA misc_RNA MGP_CBAJ_T0086449.1 MGP_CBAJ_G0032730.1 mouse_genomes_project 7 142078215 142080511 + Zfp646 protein_coding retained_intron MGP_CBAJ_T0086450.1 MGP_CBAJ_G0032730.1 mouse_genomes_project 7 142078790 142082183 + MGP_CBAJ_P0086450 Zfp646 protein_coding protein_coding MGP_CBAJ_T0086451.1 MGP_CBAJ_G0032730.1 mouse_genomes_project 7 142079695 142087991 + MGP_CBAJ_P0086451 Zfp646 protein_coding protein_coding MGP_CBAJ_T0086452.1 MGP_CBAJ_G0032730.1 mouse_genomes_project 7 142081305 142087987 + MGP_CBAJ_P0086452 Zfp646 protein_coding protein_coding MGP_CBAJ_T0010734.1 MGP_CBAJ_G0008872.1 mouse_genomes_project 7 31456861 31456957 - Gm23368 miRNA miRNA MGP_CBAJ_T0102201.1 MGP_CBAJ_G0040230.1 mouse_genomes_project 7 114226753 114227680 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0005100.1 MGP_CBAJ_G0004338.1 mouse_genomes_project 7 31859063 31862471 - Nphs1os antisense antisense MGP_CBAJ_T0081109.1 MGP_CBAJ_G0031275.1 mouse_genomes_project 7 4186627 4433909 + MGP_CBAJ_P0081109 Usp29 protein_coding protein_coding MGP_CBAJ_T0081110.1 MGP_CBAJ_G0031275.1 mouse_genomes_project 7 4186785 4428452 + MGP_CBAJ_P0081110 Usp29 protein_coding protein_coding MGP_CBAJ_T0081111.1 MGP_CBAJ_G0031275.1 mouse_genomes_project 7 4415446 4431505 + MGP_CBAJ_P0081111 Usp29 protein_coding protein_coding MGP_CBAJ_T0081112.1 MGP_CBAJ_G0031275.1 mouse_genomes_project 7 4427857 4430467 + MGP_CBAJ_P0081112 Usp29 protein_coding protein_coding MGP_CBAJ_T0082681.1 MGP_CBAJ_G0031727.1 mouse_genomes_project 7 32579014 32582931 - MGP_CBAJ_P0082681 Fxyd1 protein_coding protein_coding MGP_CBAJ_T0082682.1 MGP_CBAJ_G0031727.1 mouse_genomes_project 7 32579014 32582746 - MGP_CBAJ_P0082682 Fxyd1 protein_coding protein_coding MGP_CBAJ_T0082683.1 MGP_CBAJ_G0031727.1 mouse_genomes_project 7 32579016 32580869 - Fxyd1 protein_coding retained_intron MGP_CBAJ_T0082684.1 MGP_CBAJ_G0031727.1 mouse_genomes_project 7 32579016 32583004 - MGP_CBAJ_P0082684 Fxyd1 protein_coding protein_coding MGP_CBAJ_T0082685.1 MGP_CBAJ_G0031727.1 mouse_genomes_project 7 32579016 32582137 - MGP_CBAJ_P0082685 Fxyd1 protein_coding protein_coding MGP_CBAJ_T0082686.1 MGP_CBAJ_G0031727.1 mouse_genomes_project 7 32579017 32580459 - MGP_CBAJ_P0082686 Fxyd1 protein_coding protein_coding MGP_CBAJ_T0082687.1 MGP_CBAJ_G0031727.1 mouse_genomes_project 7 32579017 32582993 - MGP_CBAJ_P0082687 Fxyd1 protein_coding protein_coding MGP_CBAJ_T0082688.1 MGP_CBAJ_G0031727.1 mouse_genomes_project 7 32579018 32579530 - Fxyd1 protein_coding retained_intron MGP_CBAJ_T0082689.1 MGP_CBAJ_G0031727.1 mouse_genomes_project 7 32579018 32582144 - MGP_CBAJ_P0082689 Fxyd1 protein_coding protein_coding MGP_CBAJ_T0082690.1 MGP_CBAJ_G0031727.1 mouse_genomes_project 7 32579018 32582125 - MGP_CBAJ_P0082690 Fxyd1 protein_coding protein_coding MGP_CBAJ_T0082691.1 MGP_CBAJ_G0031727.1 mouse_genomes_project 7 32579019 32582155 - MGP_CBAJ_P0082691 Fxyd1 protein_coding protein_coding MGP_CBAJ_T0082692.1 MGP_CBAJ_G0031727.1 mouse_genomes_project 7 32579044 32582919 - MGP_CBAJ_P0082692 Fxyd1 protein_coding protein_coding MGP_CBAJ_T0082693.1 MGP_CBAJ_G0031727.1 mouse_genomes_project 7 32579064 32582156 - MGP_CBAJ_P0082693 Fxyd1 protein_coding protein_coding MGP_CBAJ_T0082694.1 MGP_CBAJ_G0031727.1 mouse_genomes_project 7 32579271 32583045 - MGP_CBAJ_P0082694 Fxyd1 protein_coding protein_coding MGP_CBAJ_T0082695.1 MGP_CBAJ_G0031727.1 mouse_genomes_project 7 32579464 32581382 - Fxyd1 protein_coding retained_intron MGP_CBAJ_T0082696.1 MGP_CBAJ_G0031727.1 mouse_genomes_project 7 32580825 32582960 - Fxyd1 protein_coding retained_intron MGP_CBAJ_T0082697.1 MGP_CBAJ_G0031727.1 mouse_genomes_project 7 32581099 32584492 - Fxyd1 protein_coding retained_intron MGP_CBAJ_T0010816.1 MGP_CBAJ_G0008954.1 mouse_genomes_project 7 159744726 159744792 + Gm22064 miRNA miRNA MGP_CBAJ_T0082442.1 MGP_CBAJ_G0031678.1 mouse_genomes_project 7 31620583 31672540 - MGP_CBAJ_P0082442 Wdr62 protein_coding protein_coding MGP_CBAJ_T0082443.1 MGP_CBAJ_G0031678.1 mouse_genomes_project 7 31620583 31646340 - MGP_CBAJ_P0082443 Wdr62 protein_coding protein_coding MGP_CBAJ_T0082444.1 MGP_CBAJ_G0031678.1 mouse_genomes_project 7 31620583 31672517 - MGP_CBAJ_P0082444 Wdr62 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082445.1 MGP_CBAJ_G0031678.1 mouse_genomes_project 7 31620588 31621329 - Wdr62 protein_coding processed_transcript MGP_CBAJ_T0082446.1 MGP_CBAJ_G0031678.1 mouse_genomes_project 7 31622142 31622724 - MGP_CBAJ_P0082446 Wdr62 protein_coding protein_coding MGP_CBAJ_T0082447.1 MGP_CBAJ_G0031678.1 mouse_genomes_project 7 31625859 31632294 - Wdr62 protein_coding retained_intron MGP_CBAJ_T0082448.1 MGP_CBAJ_G0031678.1 mouse_genomes_project 7 31630240 31630984 - Wdr62 protein_coding retained_intron MGP_CBAJ_T0082490.1 MGP_CBAJ_G0031687.1 mouse_genomes_project 7 31811527 31813665 - MGP_CBAJ_P0082490 Hcst protein_coding protein_coding MGP_CBAJ_T0099507.1 MGP_CBAJ_G0037762.1 mouse_genomes_project 7 108747355 108747519 + Gm23040 snRNA snRNA MGP_CBAJ_T0015539.1 MGP_CBAJ_G0013651.1 mouse_genomes_project 7 35932939 35933526 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005189.1 MGP_CBAJ_G0004400.1 mouse_genomes_project 7 123033686 123034553 + Gm16336 antisense antisense MGP_CBAJ_T0102173.1 MGP_CBAJ_G0040202.1 mouse_genomes_project 7 93725025 93727124 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0082494.1 MGP_CBAJ_G0031690.1 mouse_genomes_project 7 31842013 31854552 - Kirrel2 protein_coding retained_intron MGP_CBAJ_T0082495.1 MGP_CBAJ_G0031690.1 mouse_genomes_project 7 31842015 31854415 - MGP_CBAJ_P0082495 Kirrel2 protein_coding protein_coding MGP_CBAJ_T0082496.1 MGP_CBAJ_G0031690.1 mouse_genomes_project 7 31842550 31847919 - MGP_CBAJ_P0082496 Kirrel2 protein_coding protein_coding MGP_CBAJ_T0082497.1 MGP_CBAJ_G0031690.1 mouse_genomes_project 7 31842598 31853749 - MGP_CBAJ_P0082497 Kirrel2 protein_coding protein_coding MGP_CBAJ_T0082498.1 MGP_CBAJ_G0031690.1 mouse_genomes_project 7 31853883 31854590 - Kirrel2 protein_coding processed_transcript MGP_CBAJ_T0082402.1 MGP_CBAJ_G0031667.1 mouse_genomes_project 7 31399646 31444945 - MGP_CBAJ_P0082402 Gm26920 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081711.1 MGP_CBAJ_G0031491.1 mouse_genomes_project 7 24177166 24192383 + MGP_CBAJ_P0081711 Zfp93 protein_coding protein_coding MGP_CBAJ_T0008831.1 MGP_CBAJ_G0007121.1 mouse_genomes_project 7 86607241 86609620 + 5330411O13Rik lincRNA lincRNA MGP_CBAJ_T0081674.1 MGP_CBAJ_G0031474.1 mouse_genomes_project 7 23207227 23207802 - MGP_CBAJ_P0081674 protein_coding protein_coding MGP_CBAJ_T0082656.1 MGP_CBAJ_G0031723.1 mouse_genomes_project 7 32470084 32485741 - MGP_CBAJ_P0082656 Lsr protein_coding protein_coding MGP_CBAJ_T0082657.1 MGP_CBAJ_G0031723.1 mouse_genomes_project 7 32470089 32485779 - MGP_CBAJ_P0082657 Lsr protein_coding protein_coding MGP_CBAJ_T0082658.1 MGP_CBAJ_G0031723.1 mouse_genomes_project 7 32470091 32485742 - MGP_CBAJ_P0082658 Lsr protein_coding protein_coding MGP_CBAJ_T0082659.1 MGP_CBAJ_G0031723.1 mouse_genomes_project 7 32470093 32485637 - MGP_CBAJ_P0082659 Lsr protein_coding protein_coding MGP_CBAJ_T0082660.1 MGP_CBAJ_G0031723.1 mouse_genomes_project 7 32470576 32485730 - MGP_CBAJ_P0082660 Lsr protein_coding protein_coding MGP_CBAJ_T0018134.1 MGP_CBAJ_G0015419.1 mouse_genomes_project 7 81209349 81218890 + Gm38143 processed_transcript processed_transcript MGP_CBAJ_T0102091.1 MGP_CBAJ_G0040121.1 mouse_genomes_project 7 13391256 13391577 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081076.1 MGP_CBAJ_G0031259.1 mouse_genomes_project 7 3661389 3686907 + MGP_CBAJ_P0081076 Zfp667 protein_coding protein_coding MGP_CBAJ_T0081077.1 MGP_CBAJ_G0031259.1 mouse_genomes_project 7 3661403 3679983 + Zfp667 protein_coding processed_transcript MGP_CBAJ_T0081078.1 MGP_CBAJ_G0031259.1 mouse_genomes_project 7 3661424 3686886 + MGP_CBAJ_P0081078 Zfp667 protein_coding protein_coding MGP_CBAJ_T0081079.1 MGP_CBAJ_G0031259.1 mouse_genomes_project 7 3662674 3686706 + MGP_CBAJ_P0081079 Zfp667 protein_coding protein_coding MGP_CBAJ_T0081080.1 MGP_CBAJ_G0031259.1 mouse_genomes_project 7 3665069 3671448 + Zfp667 protein_coding retained_intron MGP_CBAJ_T0086432.1 MGP_CBAJ_G0032727.1 mouse_genomes_project 7 141976648 142009216 - MGP_CBAJ_P0086432 Stx1b protein_coding protein_coding MGP_CBAJ_T0086433.1 MGP_CBAJ_G0032727.1 mouse_genomes_project 7 141980120 141983673 - MGP_CBAJ_P0086433 Stx1b protein_coding protein_coding MGP_CBAJ_T0084436.1 MGP_CBAJ_G0032155.1 mouse_genomes_project 7 96174649 96248813 + MGP_CBAJ_P0084436 Nox4 protein_coding protein_coding MGP_CBAJ_T0084437.1 MGP_CBAJ_G0032155.1 mouse_genomes_project 7 96175194 96252158 + Nox4 protein_coding retained_intron MGP_CBAJ_T0084438.1 MGP_CBAJ_G0032155.1 mouse_genomes_project 7 96175194 96229403 + Nox4 protein_coding processed_transcript MGP_CBAJ_T0084439.1 MGP_CBAJ_G0032155.1 mouse_genomes_project 7 96175194 96336746 + MGP_CBAJ_P0084439 Nox4 protein_coding protein_coding MGP_CBAJ_T0084440.1 MGP_CBAJ_G0032155.1 mouse_genomes_project 7 96175194 96339594 + MGP_CBAJ_P0084440 Nox4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084441.1 MGP_CBAJ_G0032155.1 mouse_genomes_project 7 96175194 96333234 + MGP_CBAJ_P0084441 Nox4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084442.1 MGP_CBAJ_G0032155.1 mouse_genomes_project 7 96175194 96339594 + MGP_CBAJ_P0084442 Nox4 protein_coding protein_coding MGP_CBAJ_T0084443.1 MGP_CBAJ_G0032155.1 mouse_genomes_project 7 96175357 96339223 + MGP_CBAJ_P0084443 Nox4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083668.1 MGP_CBAJ_G0031980.1 mouse_genomes_project 7 61169271 61173598 + MGP_CBAJ_P0083668 Siglech protein_coding nonsense_mediated_decay MGP_CBAJ_T0083669.1 MGP_CBAJ_G0031980.1 mouse_genomes_project 7 61169277 61174551 + MGP_CBAJ_P0083669 Siglech protein_coding protein_coding MGP_CBAJ_T0083670.1 MGP_CBAJ_G0031980.1 mouse_genomes_project 7 61169277 61174551 + MGP_CBAJ_P0083670 Siglech protein_coding protein_coding MGP_CBAJ_T0083671.1 MGP_CBAJ_G0031980.1 mouse_genomes_project 7 61169319 61179896 + MGP_CBAJ_P0083671 Siglech protein_coding protein_coding MGP_CBAJ_T0083672.1 MGP_CBAJ_G0031980.1 mouse_genomes_project 7 61169319 61179697 + MGP_CBAJ_P0083672 Siglech protein_coding protein_coding MGP_CBAJ_T0083673.1 MGP_CBAJ_G0031980.1 mouse_genomes_project 7 61169329 61178681 + MGP_CBAJ_P0083673 Siglech protein_coding protein_coding MGP_CBAJ_T0083674.1 MGP_CBAJ_G0031980.1 mouse_genomes_project 7 61169329 61178635 + MGP_CBAJ_P0083674 Siglech protein_coding protein_coding MGP_CBAJ_T0083675.1 MGP_CBAJ_G0031980.1 mouse_genomes_project 7 61169354 61179988 + MGP_CBAJ_P0083675 Siglech protein_coding nonsense_mediated_decay MGP_CBAJ_T0015632.1 MGP_CBAJ_G0013744.1 mouse_genomes_project 7 97513784 97514340 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0082449.1 MGP_CBAJ_G0031679.1 mouse_genomes_project 7 31672214 31682358 + MGP_CBAJ_P0082449 protein_coding protein_coding MGP_CBAJ_T0099525.1 MGP_CBAJ_G0037780.1 mouse_genomes_project 7 140913308 140913415 - Gm23445 snRNA snRNA MGP_CBAJ_T0082713.1 MGP_CBAJ_G0031730.1 mouse_genomes_project 7 32627171 32643412 - MGP_CBAJ_P0082713 Hpn protein_coding protein_coding MGP_CBAJ_T0082714.1 MGP_CBAJ_G0031730.1 mouse_genomes_project 7 32627171 32639127 - MGP_CBAJ_P0082714 Hpn protein_coding protein_coding MGP_CBAJ_T0082715.1 MGP_CBAJ_G0031730.1 mouse_genomes_project 7 32627171 32643405 - MGP_CBAJ_P0082715 Hpn protein_coding nonsense_mediated_decay MGP_CBAJ_T0082716.1 MGP_CBAJ_G0031730.1 mouse_genomes_project 7 32627171 32643420 - MGP_CBAJ_P0082716 Hpn protein_coding protein_coding MGP_CBAJ_T0082717.1 MGP_CBAJ_G0031730.1 mouse_genomes_project 7 32627175 32630963 - MGP_CBAJ_P0082717 Hpn protein_coding protein_coding MGP_CBAJ_T0082718.1 MGP_CBAJ_G0031730.1 mouse_genomes_project 7 32627179 32627732 - MGP_CBAJ_P0082718 Hpn protein_coding protein_coding MGP_CBAJ_T0082719.1 MGP_CBAJ_G0031730.1 mouse_genomes_project 7 32627684 32628730 - Hpn protein_coding retained_intron MGP_CBAJ_T0082720.1 MGP_CBAJ_G0031730.1 mouse_genomes_project 7 32630641 32631639 - Hpn protein_coding retained_intron MGP_CBAJ_T0082721.1 MGP_CBAJ_G0031730.1 mouse_genomes_project 7 32630946 32631912 - Hpn protein_coding retained_intron MGP_CBAJ_T0082722.1 MGP_CBAJ_G0031730.1 mouse_genomes_project 7 32637421 32640088 - MGP_CBAJ_P0082722 Hpn protein_coding protein_coding MGP_CBAJ_T0082723.1 MGP_CBAJ_G0031730.1 mouse_genomes_project 7 32638695 32639139 - Hpn protein_coding retained_intron MGP_CBAJ_T0015458.1 MGP_CBAJ_G0013570.1 mouse_genomes_project 7 1330656 1330810 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002162.1 MGP_CBAJ_G0002077.1 mouse_genomes_project 7 18466764 18470003 - TEC TEC MGP_CBAJ_T0102082.1 MGP_CBAJ_G0040112.1 mouse_genomes_project 7 12984795 12985725 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0084626.1 MGP_CBAJ_G0032201.1 mouse_genomes_project 7 108308094 108377648 - MGP_CBAJ_P0084626 Capn5 protein_coding protein_coding MGP_CBAJ_T0084627.1 MGP_CBAJ_G0032201.1 mouse_genomes_project 7 108310196 108361985 - MGP_CBAJ_P0084627 Capn5 protein_coding protein_coding MGP_CBAJ_T0084629.1 MGP_CBAJ_G0032201.1 mouse_genomes_project 7 108338050 108361853 - Capn5 protein_coding processed_transcript MGP_CBAJ_T0084630.1 MGP_CBAJ_G0032201.1 mouse_genomes_project 7 108361623 108364478 - MGP_CBAJ_P0084630 Capn5 protein_coding protein_coding MGP_CBAJ_T0084631.1 MGP_CBAJ_G0032201.1 mouse_genomes_project 7 108361640 108364957 - MGP_CBAJ_P0084631 Capn5 protein_coding protein_coding MGP_CBAJ_T0102178.1 MGP_CBAJ_G0040207.1 mouse_genomes_project 7 94210431 94213130 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0102089.1 MGP_CBAJ_G0040119.1 mouse_genomes_project 7 13245258 13245586 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0086668.1 MGP_CBAJ_G0032768.1 mouse_genomes_project 7 145852139 145947050 + MGP_CBAJ_P0086668 5430419D17Rik protein_coding protein_coding MGP_CBAJ_T0086669.1 MGP_CBAJ_G0032768.1 mouse_genomes_project 7 145903329 145926811 + 5430419D17Rik protein_coding retained_intron MGP_CBAJ_T0086150.1 MGP_CBAJ_G0032673.1 mouse_genomes_project 7 140815050 140816079 - MGP_CBAJ_P0086150 4930451I11Rik protein_coding protein_coding MGP_CBAJ_T0086151.1 MGP_CBAJ_G0032673.1 mouse_genomes_project 7 140815051 140816222 - 4930451I11Rik protein_coding processed_transcript MGP_CBAJ_T0086152.1 MGP_CBAJ_G0032673.1 mouse_genomes_project 7 140815059 140816055 - MGP_CBAJ_P0086152 4930451I11Rik protein_coding protein_coding MGP_CBAJ_T0084164.1 MGP_CBAJ_G0032077.1 mouse_genomes_project 7 88300337 88304496 + MGP_CBAJ_P0084164 Ngrn protein_coding protein_coding MGP_CBAJ_T0084165.1 MGP_CBAJ_G0032077.1 mouse_genomes_project 7 88300342 88304496 + Ngrn protein_coding retained_intron MGP_CBAJ_T0015578.1 MGP_CBAJ_G0013690.1 mouse_genomes_project 7 48176786 48177714 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0084730.1 MGP_CBAJ_G0032231.1 mouse_genomes_project 7 110645143 110653337 + MGP_CBAJ_P0084730 Kcne3 protein_coding protein_coding MGP_CBAJ_T0084731.1 MGP_CBAJ_G0032231.1 mouse_genomes_project 7 110647165 110653337 + MGP_CBAJ_P0084731 Kcne3 protein_coding protein_coding MGP_CBAJ_T0084732.1 MGP_CBAJ_G0032231.1 mouse_genomes_project 7 110647165 110653337 + MGP_CBAJ_P0084732 Kcne3 protein_coding protein_coding MGP_CBAJ_T0084733.1 MGP_CBAJ_G0032231.1 mouse_genomes_project 7 110647165 110653337 + MGP_CBAJ_P0084733 Kcne3 protein_coding protein_coding MGP_CBAJ_T0085121.1 MGP_CBAJ_G0032389.1 mouse_genomes_project 7 115776709 115779235 + MGP_CBAJ_P0085121 protein_coding protein_coding MGP_CBAJ_T0002251.1 MGP_CBAJ_G0002165.1 mouse_genomes_project 7 129106439 129107396 - TEC TEC MGP_CBAJ_T0102061.1 MGP_CBAJ_G0040091.1 mouse_genomes_project 7 9876478 9877443 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0083541.1 MGP_CBAJ_G0031939.1 mouse_genomes_project 7 51026746 51030475 - MGP_CBAJ_P0083541 Saa3 protein_coding protein_coding MGP_CBAJ_T0002175.1 MGP_CBAJ_G0002090.1 mouse_genomes_project 7 39877958 39879160 - TEC TEC MGP_CBAJ_T0015638.1 MGP_CBAJ_G0013750.1 mouse_genomes_project 7 105370586 105372034 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0085096.1 MGP_CBAJ_G0032377.1 mouse_genomes_project 7 115465612 115475197 - MGP_CBAJ_P0085096 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085097.1 MGP_CBAJ_G0032377.1 mouse_genomes_project 7 115465612 115479973 - MGP_CBAJ_P0085097 protein_coding protein_coding MGP_CBAJ_T0015679.1 MGP_CBAJ_G0013791.1 mouse_genomes_project 7 135987005 135987246 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0086199.1 MGP_CBAJ_G0032679.1 mouse_genomes_project 7 140929005 140947231 + MGP_CBAJ_P0086199 Kctd13 protein_coding protein_coding MGP_CBAJ_T0086200.1 MGP_CBAJ_G0032679.1 mouse_genomes_project 7 140930047 140943000 + Kctd13 protein_coding retained_intron MGP_CBAJ_T0086201.1 MGP_CBAJ_G0032679.1 mouse_genomes_project 7 140943647 140946567 + Kctd13 protein_coding retained_intron MGP_CBAJ_T0015703.1 MGP_CBAJ_G0013815.1 mouse_genomes_project 7 143435053 143435811 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0082820.1 MGP_CBAJ_G0031754.1 mouse_genomes_project 7 37314699 37319927 + MGP_CBAJ_P0082820 Cebpa protein_coding protein_coding MGP_CBAJ_T0082821.1 MGP_CBAJ_G0031754.1 mouse_genomes_project 7 37314709 37319927 + MGP_CBAJ_P0082821 Cebpa protein_coding protein_coding MGP_CBAJ_T0081491.1 MGP_CBAJ_G0031422.1 mouse_genomes_project 7 18570612 18585557 + MGP_CBAJ_P0081491 Dmpk protein_coding protein_coding MGP_CBAJ_T0081492.1 MGP_CBAJ_G0031422.1 mouse_genomes_project 7 18570631 18575476 + MGP_CBAJ_P0081492 Dmpk protein_coding protein_coding MGP_CBAJ_T0081493.1 MGP_CBAJ_G0031422.1 mouse_genomes_project 7 18570633 18585557 + MGP_CBAJ_P0081493 Dmpk protein_coding nonsense_mediated_decay MGP_CBAJ_T0081494.1 MGP_CBAJ_G0031422.1 mouse_genomes_project 7 18570648 18585557 + MGP_CBAJ_P0081494 Dmpk protein_coding protein_coding MGP_CBAJ_T0081495.1 MGP_CBAJ_G0031422.1 mouse_genomes_project 7 18570704 18585558 + MGP_CBAJ_P0081495 Dmpk protein_coding protein_coding MGP_CBAJ_T0081496.1 MGP_CBAJ_G0031422.1 mouse_genomes_project 7 18571473 18576211 + Dmpk protein_coding processed_transcript MGP_CBAJ_T0081497.1 MGP_CBAJ_G0031422.1 mouse_genomes_project 7 18573263 18585555 + Dmpk protein_coding retained_intron MGP_CBAJ_T0081498.1 MGP_CBAJ_G0031422.1 mouse_genomes_project 7 18573263 18585555 + Dmpk protein_coding retained_intron MGP_CBAJ_T0081499.1 MGP_CBAJ_G0031422.1 mouse_genomes_project 7 18573263 18585555 + Dmpk protein_coding processed_transcript MGP_CBAJ_T0081500.1 MGP_CBAJ_G0031422.1 mouse_genomes_project 7 18575778 18577642 + Dmpk protein_coding processed_transcript MGP_CBAJ_T0081501.1 MGP_CBAJ_G0031422.1 mouse_genomes_project 7 18576002 18577141 + Dmpk protein_coding processed_transcript MGP_CBAJ_T0081502.1 MGP_CBAJ_G0031422.1 mouse_genomes_project 7 18576120 18583511 + Dmpk protein_coding processed_transcript MGP_CBAJ_T0081503.1 MGP_CBAJ_G0031422.1 mouse_genomes_project 7 18576255 18577868 + Dmpk protein_coding retained_intron MGP_CBAJ_T0081504.1 MGP_CBAJ_G0031422.1 mouse_genomes_project 7 18576694 18584788 + Dmpk protein_coding processed_transcript MGP_CBAJ_T0081505.1 MGP_CBAJ_G0031422.1 mouse_genomes_project 7 18583227 18584105 + Dmpk protein_coding retained_intron MGP_CBAJ_T0081506.1 MGP_CBAJ_G0031422.1 mouse_genomes_project 7 18583360 18584279 + Dmpk protein_coding processed_transcript MGP_CBAJ_T0081507.1 MGP_CBAJ_G0031422.1 mouse_genomes_project 7 18583961 18585507 + Dmpk protein_coding processed_transcript MGP_CBAJ_T0081508.1 MGP_CBAJ_G0031422.1 mouse_genomes_project 7 18584039 18584940 + Dmpk protein_coding retained_intron MGP_CBAJ_T0081514.1 MGP_CBAJ_G0031426.1 mouse_genomes_project 7 18638698 18651882 - MGP_CBAJ_P0081514 Qpctl protein_coding protein_coding MGP_CBAJ_T0081515.1 MGP_CBAJ_G0031426.1 mouse_genomes_project 7 18642550 18650119 - Qpctl protein_coding retained_intron MGP_CBAJ_T0085317.1 MGP_CBAJ_G0032488.1 mouse_genomes_project 7 120180980 120181925 - MGP_CBAJ_P0085317 Olfr493 protein_coding protein_coding MGP_CBAJ_T0085326.1 MGP_CBAJ_G0032497.1 mouse_genomes_project 7 120519129 120520204 - MGP_CBAJ_P0085326 Olfr509 protein_coding protein_coding MGP_CBAJ_T0098459.1 MGP_CBAJ_G0036720.1 mouse_genomes_project 7 137859330 137985061 + Gm15338 sense_intronic sense_intronic MGP_CBAJ_T0085017.1 MGP_CBAJ_G0032313.1 mouse_genomes_project 7 114165580 114168237 + MGP_CBAJ_P0085017 Olfr592 protein_coding protein_coding MGP_CBAJ_T0085018.1 MGP_CBAJ_G0032313.1 mouse_genomes_project 7 114167298 114168237 + MGP_CBAJ_P0085018 Olfr592 protein_coding protein_coding MGP_CBAJ_T0011566.1 MGP_CBAJ_G0009704.1 mouse_genomes_project 7 114269963 114270284 + Gm23973 misc_RNA misc_RNA MGP_CBAJ_T0002180.1 MGP_CBAJ_G0002095.1 mouse_genomes_project 7 42674077 42677061 + TEC TEC MGP_CBAJ_T0005552.1 MGP_CBAJ_G0004669.1 mouse_genomes_project 7 87175656 87176780 - Gm44558 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_CBAJ_T0005553.1 MGP_CBAJ_G0004669.1 mouse_genomes_project 7 87175660 87177004 - Gm44558 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_CBAJ_T0082976.1 MGP_CBAJ_G0031790.1 mouse_genomes_project 7 45791219 45792172 - protein_coding retained_intron MGP_CBAJ_T0082977.1 MGP_CBAJ_G0031790.1 mouse_genomes_project 7 45791993 45848176 - MGP_CBAJ_P0082977 protein_coding protein_coding MGP_CBAJ_T0082978.1 MGP_CBAJ_G0031790.1 mouse_genomes_project 7 45808384 45848161 - protein_coding retained_intron MGP_CBAJ_T0101384.1 MGP_CBAJ_G0039450.1 mouse_genomes_project 7 47653952 47658445 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101385.1 MGP_CBAJ_G0039450.1 mouse_genomes_project 7 47655755 47659572 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0005236.1 MGP_CBAJ_G0004434.1 mouse_genomes_project 7 159129028 159213362 - Kcnq1ot1 antisense antisense MGP_CBAJ_T0084997.1 MGP_CBAJ_G0032294.1 mouse_genomes_project 7 113686358 113687429 + MGP_CBAJ_P0084997 Olfr561 protein_coding protein_coding MGP_CBAJ_T0015599.1 MGP_CBAJ_G0013711.1 mouse_genomes_project 7 69903920 69904181 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005119.1 MGP_CBAJ_G0004353.1 mouse_genomes_project 7 37813887 37815456 + B230322F03Rik antisense antisense MGP_CBAJ_T0081099.1 MGP_CBAJ_G0031270.1 mouse_genomes_project 7 3906181 3923538 - MGP_CBAJ_P0081099 Olfr1348 protein_coding protein_coding MGP_CBAJ_T0080771.1 MGP_CBAJ_G0031184.1 mouse_genomes_project 7 628043 636799 - MGP_CBAJ_P0080771 Oscar protein_coding protein_coding MGP_CBAJ_T0080772.1 MGP_CBAJ_G0031184.1 mouse_genomes_project 7 628043 636823 - MGP_CBAJ_P0080772 Oscar protein_coding protein_coding MGP_CBAJ_T0080773.1 MGP_CBAJ_G0031184.1 mouse_genomes_project 7 628043 636823 - MGP_CBAJ_P0080773 Oscar protein_coding protein_coding MGP_CBAJ_T0080774.1 MGP_CBAJ_G0031184.1 mouse_genomes_project 7 629401 636751 - Oscar protein_coding processed_transcript MGP_CBAJ_T0084102.1 MGP_CBAJ_G0032061.1 mouse_genomes_project 7 87597197 87645381 + MGP_CBAJ_P0084102 Ticrr protein_coding protein_coding MGP_CBAJ_T0084103.1 MGP_CBAJ_G0032061.1 mouse_genomes_project 7 87597223 87598677 + Ticrr protein_coding retained_intron MGP_CBAJ_T0084104.1 MGP_CBAJ_G0032061.1 mouse_genomes_project 7 87597232 87645367 + MGP_CBAJ_P0084104 Ticrr protein_coding nonsense_mediated_decay MGP_CBAJ_T0084105.1 MGP_CBAJ_G0032061.1 mouse_genomes_project 7 87597246 87629142 + MGP_CBAJ_P0084105 Ticrr protein_coding nonsense_mediated_decay MGP_CBAJ_T0084106.1 MGP_CBAJ_G0032061.1 mouse_genomes_project 7 87597248 87641163 + MGP_CBAJ_P0084106 Ticrr protein_coding nonsense_mediated_decay MGP_CBAJ_T0084107.1 MGP_CBAJ_G0032061.1 mouse_genomes_project 7 87611410 87617509 + Ticrr protein_coding processed_transcript MGP_CBAJ_T0084108.1 MGP_CBAJ_G0032061.1 mouse_genomes_project 7 87612800 87617509 + Ticrr protein_coding retained_intron MGP_CBAJ_T0015571.1 MGP_CBAJ_G0013683.1 mouse_genomes_project 7 46357926 46359863 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002265.1 MGP_CBAJ_G0002179.1 mouse_genomes_project 7 138829845 138832308 - TEC TEC MGP_CBAJ_T0083266.1 MGP_CBAJ_G0031866.1 mouse_genomes_project 7 49075812 49107304 - MGP_CBAJ_P0083266 Prr12 protein_coding protein_coding MGP_CBAJ_T0100723.1 MGP_CBAJ_G0038978.1 mouse_genomes_project 7 48149750 48149841 + Gm26247 snoRNA snoRNA MGP_CBAJ_T0081727.1 MGP_CBAJ_G0031494.1 mouse_genomes_project 7 24262598 24263453 - MGP_CBAJ_P0081727 Tescl protein_coding protein_coding MGP_CBAJ_T0085520.1 MGP_CBAJ_G0032549.1 mouse_genomes_project 7 126208169 126505481 + MGP_CBAJ_P0085520 Spon1 protein_coding protein_coding MGP_CBAJ_T0085521.1 MGP_CBAJ_G0032549.1 mouse_genomes_project 7 126208345 126386317 + MGP_CBAJ_P0085521 Spon1 protein_coding protein_coding MGP_CBAJ_T0102170.1 MGP_CBAJ_G0040199.1 mouse_genomes_project 7 93633263 93633483 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0080938.1 MGP_CBAJ_G0031210.1 mouse_genomes_project 7 1671574 1683943 - MGP_CBAJ_P0080938 Dnaaf3 protein_coding protein_coding MGP_CBAJ_T0087075.1 MGP_CBAJ_G0032888.1 mouse_genomes_project 7 156925227 156928943 - MGP_CBAJ_P0087075 Irf7 protein_coding protein_coding MGP_CBAJ_T0087076.1 MGP_CBAJ_G0032888.1 mouse_genomes_project 7 156925704 156929003 - MGP_CBAJ_P0087076 Irf7 protein_coding protein_coding MGP_CBAJ_T0087077.1 MGP_CBAJ_G0032888.1 mouse_genomes_project 7 156925705 156928945 - MGP_CBAJ_P0087077 Irf7 protein_coding protein_coding MGP_CBAJ_T0087078.1 MGP_CBAJ_G0032888.1 mouse_genomes_project 7 156925708 156928944 - Irf7 protein_coding retained_intron MGP_CBAJ_T0087079.1 MGP_CBAJ_G0032888.1 mouse_genomes_project 7 156925953 156927814 - MGP_CBAJ_P0087079 Irf7 protein_coding protein_coding MGP_CBAJ_T0087080.1 MGP_CBAJ_G0032888.1 mouse_genomes_project 7 156926312 156927653 - Irf7 protein_coding retained_intron MGP_CBAJ_T0087081.1 MGP_CBAJ_G0032888.1 mouse_genomes_project 7 156926494 156928566 - Irf7 protein_coding processed_transcript MGP_CBAJ_T0087082.1 MGP_CBAJ_G0032888.1 mouse_genomes_project 7 156926744 156927995 - Irf7 protein_coding retained_intron MGP_CBAJ_T0087083.1 MGP_CBAJ_G0032888.1 mouse_genomes_project 7 156927321 156928229 - Irf7 protein_coding retained_intron MGP_CBAJ_T0087084.1 MGP_CBAJ_G0032888.1 mouse_genomes_project 7 156927736 156928506 - Irf7 protein_coding retained_intron MGP_CBAJ_T0087085.1 MGP_CBAJ_G0032888.1 mouse_genomes_project 7 156927897 156928943 - Irf7 protein_coding processed_transcript MGP_CBAJ_T0081428.1 MGP_CBAJ_G0031392.1 mouse_genomes_project 7 16863524 16939694 + MGP_CBAJ_P0081428 Ceacam5 protein_coding protein_coding MGP_CBAJ_T0083253.1 MGP_CBAJ_G0031860.1 mouse_genomes_project 7 49021707 49031151 - MGP_CBAJ_P0083253 protein_coding protein_coding MGP_CBAJ_T0087236.1 MGP_CBAJ_G0032915.1 mouse_genomes_project 7 157827124 157842881 - MGP_CBAJ_P0087236 Dusp8 protein_coding protein_coding MGP_CBAJ_T0087237.1 MGP_CBAJ_G0032915.1 mouse_genomes_project 7 157831228 157843452 - MGP_CBAJ_P0087237 Dusp8 protein_coding protein_coding MGP_CBAJ_T0084887.1 MGP_CBAJ_G0032258.1 mouse_genomes_project 7 112612487 112637424 + MGP_CBAJ_P0084887 Anapc15 protein_coding protein_coding MGP_CBAJ_T0084888.1 MGP_CBAJ_G0032258.1 mouse_genomes_project 7 112633893 112635906 + Anapc15 protein_coding processed_transcript MGP_CBAJ_T0084889.1 MGP_CBAJ_G0032258.1 mouse_genomes_project 7 112634203 112637422 + MGP_CBAJ_P0084889 Anapc15 protein_coding protein_coding MGP_CBAJ_T0084890.1 MGP_CBAJ_G0032258.1 mouse_genomes_project 7 112634271 112636108 + Anapc15 protein_coding retained_intron MGP_CBAJ_T0084891.1 MGP_CBAJ_G0032258.1 mouse_genomes_project 7 112634279 112637362 + MGP_CBAJ_P0084891 Anapc15 protein_coding protein_coding MGP_CBAJ_T0084892.1 MGP_CBAJ_G0032258.1 mouse_genomes_project 7 112634280 112639521 + MGP_CBAJ_P0084892 Anapc15 protein_coding protein_coding MGP_CBAJ_T0084893.1 MGP_CBAJ_G0032258.1 mouse_genomes_project 7 112634291 112637420 + Anapc15 protein_coding retained_intron MGP_CBAJ_T0084894.1 MGP_CBAJ_G0032258.1 mouse_genomes_project 7 112634726 112635909 + Anapc15 protein_coding processed_transcript MGP_CBAJ_T0084895.1 MGP_CBAJ_G0032258.1 mouse_genomes_project 7 112634824 112636924 + MGP_CBAJ_P0084895 Anapc15 protein_coding protein_coding MGP_CBAJ_T0084896.1 MGP_CBAJ_G0032258.1 mouse_genomes_project 7 112635251 112636460 + Anapc15 protein_coding retained_intron MGP_CBAJ_T0084897.1 MGP_CBAJ_G0032258.1 mouse_genomes_project 7 112635613 112639727 + MGP_CBAJ_P0084897 Anapc15 protein_coding protein_coding MGP_CBAJ_T0084898.1 MGP_CBAJ_G0032258.1 mouse_genomes_project 7 112635676 112639521 + MGP_CBAJ_P0084898 Anapc15 protein_coding protein_coding MGP_CBAJ_T0084900.1 MGP_CBAJ_G0032258.1 mouse_genomes_project 7 112636873 112637426 + Anapc15 protein_coding processed_transcript MGP_CBAJ_T0102215.1 MGP_CBAJ_G0040244.1 mouse_genomes_project 7 115879938 115880904 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0084133.1 MGP_CBAJ_G0032069.1 mouse_genomes_project 7 87838506 87887046 - MGP_CBAJ_P0084133 Ap3s2 protein_coding protein_coding MGP_CBAJ_T0084134.1 MGP_CBAJ_G0032069.1 mouse_genomes_project 7 87845688 87886993 - MGP_CBAJ_P0084134 Ap3s2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084411.1 MGP_CBAJ_G0032133.1 mouse_genomes_project 7 93599495 93609508 - MGP_CBAJ_P0084411 Vmn2r66 protein_coding protein_coding MGP_CBAJ_T0082575.1 MGP_CBAJ_G0031701.1 mouse_genomes_project 7 32014657 32017919 - MGP_CBAJ_P0082575 Zbtb32 protein_coding protein_coding MGP_CBAJ_T0082576.1 MGP_CBAJ_G0031701.1 mouse_genomes_project 7 32014659 32023846 - MGP_CBAJ_P0082576 Zbtb32 protein_coding protein_coding MGP_CBAJ_T0082577.1 MGP_CBAJ_G0031701.1 mouse_genomes_project 7 32022908 32023886 - Zbtb32 protein_coding processed_transcript MGP_CBAJ_T0084445.1 MGP_CBAJ_G0032157.1 mouse_genomes_project 7 96556037 97168646 + MGP_CBAJ_P0084445 Grm5 protein_coding protein_coding MGP_CBAJ_T0084446.1 MGP_CBAJ_G0032157.1 mouse_genomes_project 7 96581935 97164458 + MGP_CBAJ_P0084446 Grm5 protein_coding protein_coding MGP_CBAJ_T0084447.1 MGP_CBAJ_G0032157.1 mouse_genomes_project 7 96802795 96810543 + Grm5 protein_coding processed_transcript MGP_CBAJ_T0084367.1 MGP_CBAJ_G0032117.1 mouse_genomes_project 7 92010662 92017311 - MGP_CBAJ_P0084367 protein_coding protein_coding MGP_CBAJ_T0085040.1 MGP_CBAJ_G0032335.1 mouse_genomes_project 7 114725565 114726519 - MGP_CBAJ_P0085040 Olfr623 protein_coding protein_coding MGP_CBAJ_T0002203.1 MGP_CBAJ_G0002118.1 mouse_genomes_project 7 70056657 70058188 + TEC TEC MGP_CBAJ_T0015603.1 MGP_CBAJ_G0013715.1 mouse_genomes_project 7 72432366 72433112 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0086882.1 MGP_CBAJ_G0032823.1 mouse_genomes_project 7 155310620 155362228 + MGP_CBAJ_P0086882 Adgra1 protein_coding protein_coding MGP_CBAJ_T0086883.1 MGP_CBAJ_G0032823.1 mouse_genomes_project 7 155310811 155325043 + Adgra1 protein_coding processed_transcript MGP_CBAJ_T0086884.1 MGP_CBAJ_G0032823.1 mouse_genomes_project 7 155311408 155317651 + Adgra1 protein_coding retained_intron MGP_CBAJ_T0086885.1 MGP_CBAJ_G0032823.1 mouse_genomes_project 7 155327260 155362227 + MGP_CBAJ_P0086885 Adgra1 protein_coding unknown_likely_coding MGP_CBAJ_T0015581.1 MGP_CBAJ_G0013693.1 mouse_genomes_project 7 49413070 49413631 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002248.1 MGP_CBAJ_G0002162.1 mouse_genomes_project 7 102201172 102201491 + TEC TEC MGP_CBAJ_T0084938.1 MGP_CBAJ_G0032267.1 mouse_genomes_project 7 112854297 112869295 + MGP_CBAJ_P0084938 Trpc2 protein_coding protein_coding MGP_CBAJ_T0099532.1 MGP_CBAJ_G0037787.1 mouse_genomes_project 7 156734459 156734568 - Gm24962 snRNA snRNA MGP_CBAJ_T0008844.1 MGP_CBAJ_G0007127.1 mouse_genomes_project 7 87510845 87518270 - Gm45169 lincRNA lincRNA MGP_CBAJ_T0082971.1 MGP_CBAJ_G0031787.1 mouse_genomes_project 7 45393404 45485627 + MGP_CBAJ_P0082971 Vmn2r60 protein_coding protein_coding MGP_CBAJ_T0010775.1 MGP_CBAJ_G0008913.1 mouse_genomes_project 7 72733192 72733250 - Mir7057 miRNA miRNA MGP_CBAJ_T0086102.1 MGP_CBAJ_G0032667.1 mouse_genomes_project 7 140742511 140751829 + MGP_CBAJ_P0086102 Gdpd3 protein_coding protein_coding MGP_CBAJ_T0086103.1 MGP_CBAJ_G0032667.1 mouse_genomes_project 7 140743022 140744390 + Gdpd3 protein_coding retained_intron MGP_CBAJ_T0086104.1 MGP_CBAJ_G0032667.1 mouse_genomes_project 7 140743024 140744839 + Gdpd3 protein_coding retained_intron MGP_CBAJ_T0086105.1 MGP_CBAJ_G0032667.1 mouse_genomes_project 7 140743352 140744213 + Gdpd3 protein_coding retained_intron MGP_CBAJ_T0086106.1 MGP_CBAJ_G0032667.1 mouse_genomes_project 7 140744327 140747350 + Gdpd3 protein_coding retained_intron MGP_CBAJ_T0086107.1 MGP_CBAJ_G0032667.1 mouse_genomes_project 7 140744697 140751833 + Gdpd3 protein_coding retained_intron MGP_CBAJ_T0086340.1 MGP_CBAJ_G0032712.1 mouse_genomes_project 7 141636206 141656946 + Srcap protein_coding retained_intron MGP_CBAJ_T0086341.1 MGP_CBAJ_G0032712.1 mouse_genomes_project 7 141636206 141659415 + MGP_CBAJ_P0086341 Srcap protein_coding protein_coding MGP_CBAJ_T0086342.1 MGP_CBAJ_G0032712.1 mouse_genomes_project 7 141636225 141650883 + MGP_CBAJ_P0086342 Srcap protein_coding protein_coding MGP_CBAJ_T0086343.1 MGP_CBAJ_G0032712.1 mouse_genomes_project 7 141636250 141655227 + MGP_CBAJ_P0086343 Srcap protein_coding protein_coding MGP_CBAJ_T0086344.1 MGP_CBAJ_G0032712.1 mouse_genomes_project 7 141636335 141639643 + Srcap protein_coding processed_transcript MGP_CBAJ_T0086345.1 MGP_CBAJ_G0032712.1 mouse_genomes_project 7 141636524 141640226 + Srcap protein_coding processed_transcript MGP_CBAJ_T0086346.1 MGP_CBAJ_G0032712.1 mouse_genomes_project 7 141636688 141669329 + MGP_CBAJ_P0086346 Srcap protein_coding protein_coding MGP_CBAJ_T0086347.1 MGP_CBAJ_G0032712.1 mouse_genomes_project 7 141637215 141666469 + Srcap protein_coding retained_intron MGP_CBAJ_T0086348.1 MGP_CBAJ_G0032712.1 mouse_genomes_project 7 141637215 141666469 + MGP_CBAJ_P0086348 Srcap protein_coding protein_coding MGP_CBAJ_T0086349.1 MGP_CBAJ_G0032712.1 mouse_genomes_project 7 141637241 141691243 + MGP_CBAJ_P0086349 Srcap protein_coding protein_coding MGP_CBAJ_T0086350.1 MGP_CBAJ_G0032712.1 mouse_genomes_project 7 141640222 141647584 + Srcap protein_coding retained_intron MGP_CBAJ_T0086351.1 MGP_CBAJ_G0032712.1 mouse_genomes_project 7 141640377 141690810 + MGP_CBAJ_P0086351 Srcap protein_coding protein_coding MGP_CBAJ_T0086352.1 MGP_CBAJ_G0032712.1 mouse_genomes_project 7 141640377 141690810 + MGP_CBAJ_P0086352 Srcap protein_coding protein_coding MGP_CBAJ_T0086354.1 MGP_CBAJ_G0032712.1 mouse_genomes_project 7 141663852 141665885 + Srcap protein_coding retained_intron MGP_CBAJ_T0086671.1 MGP_CBAJ_G0032770.1 mouse_genomes_project 7 146028571 146032316 - MGP_CBAJ_P0086671 1700007K09Rik protein_coding protein_coding MGP_CBAJ_T0086672.1 MGP_CBAJ_G0032770.1 mouse_genomes_project 7 146028726 146030128 - MGP_CBAJ_P0086672 1700007K09Rik protein_coding protein_coding MGP_CBAJ_T0015527.1 MGP_CBAJ_G0013639.1 mouse_genomes_project 7 27781161 27781408 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005064.1 MGP_CBAJ_G0004313.1 mouse_genomes_project 7 1792806 1796379 + Gm44877 antisense antisense MGP_CBAJ_T0081584.1 MGP_CBAJ_G0031444.1 mouse_genomes_project 7 19000094 19038359 + MGP_CBAJ_P0081584 Exoc3l2 protein_coding unknown_likely_coding MGP_CBAJ_T0081585.1 MGP_CBAJ_G0031444.1 mouse_genomes_project 7 19032186 19039868 + MGP_CBAJ_P0081585 Exoc3l2 protein_coding protein_coding MGP_CBAJ_T0083059.1 MGP_CBAJ_G0031818.1 mouse_genomes_project 7 47513164 47519472 + MGP_CBAJ_P0083059 Klk8 protein_coding protein_coding MGP_CBAJ_T0083060.1 MGP_CBAJ_G0031818.1 mouse_genomes_project 7 47513183 47519321 + MGP_CBAJ_P0083060 Klk8 protein_coding protein_coding MGP_CBAJ_T0083061.1 MGP_CBAJ_G0031818.1 mouse_genomes_project 7 47517515 47519476 + Klk8 protein_coding retained_intron MGP_CBAJ_T0015623.1 MGP_CBAJ_G0013735.1 mouse_genomes_project 7 89349425 89349773 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0083306.1 MGP_CBAJ_G0031882.1 mouse_genomes_project 7 49312043 49317239 - MGP_CBAJ_P0083306 Cd37 protein_coding protein_coding MGP_CBAJ_T0083307.1 MGP_CBAJ_G0031882.1 mouse_genomes_project 7 49312047 49317214 - Cd37 protein_coding retained_intron MGP_CBAJ_T0083308.1 MGP_CBAJ_G0031882.1 mouse_genomes_project 7 49312051 49317514 - MGP_CBAJ_P0083308 Cd37 protein_coding protein_coding MGP_CBAJ_T0083309.1 MGP_CBAJ_G0031882.1 mouse_genomes_project 7 49312053 49313910 - Cd37 protein_coding processed_transcript MGP_CBAJ_T0083310.1 MGP_CBAJ_G0031882.1 mouse_genomes_project 7 49312301 49315498 - Cd37 protein_coding processed_transcript MGP_CBAJ_T0083311.1 MGP_CBAJ_G0031882.1 mouse_genomes_project 7 49312580 49317273 - MGP_CBAJ_P0083311 Cd37 protein_coding protein_coding MGP_CBAJ_T0083312.1 MGP_CBAJ_G0031882.1 mouse_genomes_project 7 49312760 49313869 - Cd37 protein_coding processed_transcript MGP_CBAJ_T0083313.1 MGP_CBAJ_G0031882.1 mouse_genomes_project 7 49313148 49317456 - MGP_CBAJ_P0083313 Cd37 protein_coding protein_coding MGP_CBAJ_T0083314.1 MGP_CBAJ_G0031882.1 mouse_genomes_project 7 49316132 49317195 - Cd37 protein_coding retained_intron MGP_CBAJ_T0082457.1 MGP_CBAJ_G0031681.1 mouse_genomes_project 7 31704550 31710138 + MGP_CBAJ_P0082457 Alkbh6 protein_coding protein_coding MGP_CBAJ_T0082458.1 MGP_CBAJ_G0031681.1 mouse_genomes_project 7 31704610 31709988 + MGP_CBAJ_P0082458 Alkbh6 protein_coding protein_coding MGP_CBAJ_T0082459.1 MGP_CBAJ_G0031681.1 mouse_genomes_project 7 31704610 31709995 + MGP_CBAJ_P0082459 Alkbh6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082460.1 MGP_CBAJ_G0031681.1 mouse_genomes_project 7 31704621 31710137 + Alkbh6 protein_coding retained_intron MGP_CBAJ_T0082461.1 MGP_CBAJ_G0031681.1 mouse_genomes_project 7 31704628 31708342 + Alkbh6 protein_coding retained_intron MGP_CBAJ_T0082462.1 MGP_CBAJ_G0031681.1 mouse_genomes_project 7 31704642 31708254 + Alkbh6 protein_coding retained_intron MGP_CBAJ_T0082463.1 MGP_CBAJ_G0031681.1 mouse_genomes_project 7 31704646 31706884 + Alkbh6 protein_coding processed_transcript MGP_CBAJ_T0082464.1 MGP_CBAJ_G0031681.1 mouse_genomes_project 7 31704687 31708530 + Alkbh6 protein_coding retained_intron MGP_CBAJ_T0082465.1 MGP_CBAJ_G0031681.1 mouse_genomes_project 7 31705604 31708495 + Alkbh6 protein_coding retained_intron MGP_CBAJ_T0082466.1 MGP_CBAJ_G0031681.1 mouse_genomes_project 7 31706960 31708197 + Alkbh6 protein_coding retained_intron MGP_CBAJ_T0082467.1 MGP_CBAJ_G0031681.1 mouse_genomes_project 7 31708508 31710138 + Alkbh6 protein_coding processed_transcript MGP_CBAJ_T0085264.1 MGP_CBAJ_G0032443.1 mouse_genomes_project 7 118457590 118458541 - MGP_CBAJ_P0085264 Olfr699 protein_coding protein_coding MGP_CBAJ_T0086072.1 MGP_CBAJ_G0032662.1 mouse_genomes_project 7 140633688 140637285 - MGP_CBAJ_P0086072 Sult1a1 protein_coding protein_coding MGP_CBAJ_T0086073.1 MGP_CBAJ_G0032662.1 mouse_genomes_project 7 140635086 140637303 - MGP_CBAJ_P0086073 Sult1a1 protein_coding protein_coding MGP_CBAJ_T0102107.1 MGP_CBAJ_G0040136.1 mouse_genomes_project 7 27190544 27200243 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0084222.1 MGP_CBAJ_G0032084.1 mouse_genomes_project 7 88422591 88434931 - MGP_CBAJ_P0084222 Fes protein_coding nonsense_mediated_decay MGP_CBAJ_T0084223.1 MGP_CBAJ_G0032084.1 mouse_genomes_project 7 88422593 88425271 - Fes protein_coding retained_intron MGP_CBAJ_T0084224.1 MGP_CBAJ_G0032084.1 mouse_genomes_project 7 88422593 88424465 - MGP_CBAJ_P0084224 Fes protein_coding protein_coding MGP_CBAJ_T0084225.1 MGP_CBAJ_G0032084.1 mouse_genomes_project 7 88422593 88434941 - MGP_CBAJ_P0084225 Fes protein_coding protein_coding MGP_CBAJ_T0084226.1 MGP_CBAJ_G0032084.1 mouse_genomes_project 7 88422598 88434866 - MGP_CBAJ_P0084226 Fes protein_coding nonsense_mediated_decay MGP_CBAJ_T0084227.1 MGP_CBAJ_G0032084.1 mouse_genomes_project 7 88422599 88434936 - MGP_CBAJ_P0084227 Fes protein_coding nonsense_mediated_decay MGP_CBAJ_T0084228.1 MGP_CBAJ_G0032084.1 mouse_genomes_project 7 88422608 88434414 - MGP_CBAJ_P0084228 Fes protein_coding protein_coding MGP_CBAJ_T0084229.1 MGP_CBAJ_G0032084.1 mouse_genomes_project 7 88429070 88434890 - MGP_CBAJ_P0084229 Fes protein_coding nonsense_mediated_decay MGP_CBAJ_T0084230.1 MGP_CBAJ_G0032084.1 mouse_genomes_project 7 88433907 88434876 - MGP_CBAJ_P0084230 Fes protein_coding protein_coding MGP_CBAJ_T0084231.1 MGP_CBAJ_G0032084.1 mouse_genomes_project 7 88434033 88434889 - Fes protein_coding retained_intron MGP_CBAJ_T0102217.1 MGP_CBAJ_G0040246.1 mouse_genomes_project 7 117233021 118234164 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0102186.1 MGP_CBAJ_G0040215.1 mouse_genomes_project 7 94737783 94738160 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0102093.1 MGP_CBAJ_G0040123.1 mouse_genomes_project 7 14437423 14437753 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010760.1 MGP_CBAJ_G0008898.1 mouse_genomes_project 7 67603168 67603266 - Gm23917 miRNA miRNA MGP_CBAJ_T0084465.1 MGP_CBAJ_G0032164.1 mouse_genomes_project 7 98800284 98801312 - MGP_CBAJ_P0084465 protein_coding protein_coding MGP_CBAJ_T0015619.1 MGP_CBAJ_G0013731.1 mouse_genomes_project 7 87323905 87324113 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099505.1 MGP_CBAJ_G0037760.1 mouse_genomes_project 7 105345945 105346052 - Gm25684 snRNA snRNA MGP_CBAJ_T0081220.1 MGP_CBAJ_G0031327.1 mouse_genomes_project 7 11398048 11398999 + MGP_CBAJ_P0081220 Vmn1r89 protein_coding protein_coding MGP_CBAJ_T0086983.1 MGP_CBAJ_G0032866.1 mouse_genomes_project 7 156468361 156486574 - MGP_CBAJ_P0086983 Sirt3 protein_coding protein_coding MGP_CBAJ_T0086984.1 MGP_CBAJ_G0032866.1 mouse_genomes_project 7 156468361 156487014 - MGP_CBAJ_P0086984 Sirt3 protein_coding protein_coding MGP_CBAJ_T0086985.1 MGP_CBAJ_G0032866.1 mouse_genomes_project 7 156469711 156482851 - MGP_CBAJ_P0086985 Sirt3 protein_coding protein_coding MGP_CBAJ_T0086986.1 MGP_CBAJ_G0032866.1 mouse_genomes_project 7 156474181 156486574 - MGP_CBAJ_P0086986 Sirt3 protein_coding protein_coding MGP_CBAJ_T0086987.1 MGP_CBAJ_G0032866.1 mouse_genomes_project 7 156481137 156486574 - MGP_CBAJ_P0086987 Sirt3 protein_coding protein_coding MGP_CBAJ_T0081881.1 MGP_CBAJ_G0031532.1 mouse_genomes_project 7 25473051 25475732 + Tmem145 protein_coding retained_intron MGP_CBAJ_T0081882.1 MGP_CBAJ_G0031532.1 mouse_genomes_project 7 25473053 25482460 + MGP_CBAJ_P0081882 Tmem145 protein_coding protein_coding MGP_CBAJ_T0081883.1 MGP_CBAJ_G0031532.1 mouse_genomes_project 7 25473053 25482447 + MGP_CBAJ_P0081883 Tmem145 protein_coding protein_coding MGP_CBAJ_T0081884.1 MGP_CBAJ_G0031532.1 mouse_genomes_project 7 25481304 25482457 + Tmem145 protein_coding retained_intron MGP_CBAJ_T0081774.1 MGP_CBAJ_G0031506.1 mouse_genomes_project 7 24555632 24579720 + MGP_CBAJ_P0081774 Ethe1 protein_coding protein_coding MGP_CBAJ_T0087398.1 MGP_CBAJ_G0032948.1 mouse_genomes_project 7 159618880 159647784 - MGP_CBAJ_P0087398 protein_coding protein_coding MGP_CBAJ_T0081139.1 MGP_CBAJ_G0031298.1 mouse_genomes_project 7 10376046 10376964 + MGP_CBAJ_P0081139 Vmn1r82 protein_coding protein_coding MGP_CBAJ_T0081140.1 MGP_CBAJ_G0031298.1 mouse_genomes_project 7 10376049 10376964 + MGP_CBAJ_P0081140 Vmn1r82 protein_coding protein_coding MGP_CBAJ_T0080879.1 MGP_CBAJ_G0031200.1 mouse_genomes_project 7 1297930 1300390 - MGP_CBAJ_P0080879 Leng9 protein_coding protein_coding MGP_CBAJ_T0086576.1 MGP_CBAJ_G0032754.1 mouse_genomes_project 7 142874713 142903749 + MGP_CBAJ_P0086576 Bag3 protein_coding protein_coding MGP_CBAJ_T0085572.1 MGP_CBAJ_G0032559.1 mouse_genomes_project 7 128686287 128754178 + MGP_CBAJ_P0085572 protein_coding protein_coding MGP_CBAJ_T0085573.1 MGP_CBAJ_G0032559.1 mouse_genomes_project 7 128686601 128755504 + MGP_CBAJ_P0085573 protein_coding protein_coding MGP_CBAJ_T0081252.1 MGP_CBAJ_G0031335.1 mouse_genomes_project 7 11834297 11897495 + MGP_CBAJ_P0081252 Sult2a5 protein_coding protein_coding MGP_CBAJ_T0081429.1 MGP_CBAJ_G0031393.1 mouse_genomes_project 7 17001881 17004950 + MGP_CBAJ_P0081429 Ceacam14 protein_coding protein_coding MGP_CBAJ_T0099474.1 MGP_CBAJ_G0037729.1 mouse_genomes_project 7 11067081 11067188 + Gm26325 snRNA snRNA MGP_CBAJ_T0086696.1 MGP_CBAJ_G0032779.1 mouse_genomes_project 7 146674632 146706165 + MGP_CBAJ_P0086696 Gpr26 protein_coding protein_coding MGP_CBAJ_T0085707.1 MGP_CBAJ_G0032589.1 mouse_genomes_project 7 132892391 132917954 - MGP_CBAJ_P0085707 Eri2 protein_coding protein_coding MGP_CBAJ_T0085708.1 MGP_CBAJ_G0032589.1 mouse_genomes_project 7 132895658 132917954 - MGP_CBAJ_P0085708 Eri2 protein_coding protein_coding MGP_CBAJ_T0085712.1 MGP_CBAJ_G0032589.1 mouse_genomes_project 7 132906215 132917962 - Eri2 protein_coding retained_intron MGP_CBAJ_T0085713.1 MGP_CBAJ_G0032589.1 mouse_genomes_project 7 132907463 132917969 - MGP_CBAJ_P0085713 Eri2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085714.1 MGP_CBAJ_G0032589.1 mouse_genomes_project 7 132907480 132917946 - MGP_CBAJ_P0085714 Eri2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085715.1 MGP_CBAJ_G0032589.1 mouse_genomes_project 7 132908532 132918045 - MGP_CBAJ_P0085715 Eri2 protein_coding protein_coding MGP_CBAJ_T0085716.1 MGP_CBAJ_G0032589.1 mouse_genomes_project 7 132910130 132911589 - Eri2 protein_coding retained_intron MGP_CBAJ_T0083323.1 MGP_CBAJ_G0031886.1 mouse_genomes_project 7 49431085 49464552 - MGP_CBAJ_P0083323 Ppfia3 protein_coding protein_coding MGP_CBAJ_T0083324.1 MGP_CBAJ_G0031886.1 mouse_genomes_project 7 49431086 49432731 - Ppfia3 protein_coding processed_transcript MGP_CBAJ_T0083325.1 MGP_CBAJ_G0031886.1 mouse_genomes_project 7 49431086 49464857 - MGP_CBAJ_P0083325 Ppfia3 protein_coding protein_coding MGP_CBAJ_T0083326.1 MGP_CBAJ_G0031886.1 mouse_genomes_project 7 49431232 49464857 - Ppfia3 protein_coding retained_intron MGP_CBAJ_T0083327.1 MGP_CBAJ_G0031886.1 mouse_genomes_project 7 49431234 49457965 - MGP_CBAJ_P0083327 Ppfia3 protein_coding protein_coding MGP_CBAJ_T0083328.1 MGP_CBAJ_G0031886.1 mouse_genomes_project 7 49431240 49432722 - Ppfia3 protein_coding processed_transcript MGP_CBAJ_T0083329.1 MGP_CBAJ_G0031886.1 mouse_genomes_project 7 49431781 49433120 - Ppfia3 protein_coding retained_intron MGP_CBAJ_T0085428.1 MGP_CBAJ_G0032531.1 mouse_genomes_project 7 122919712 122920880 - Rnf141 protein_coding retained_intron MGP_CBAJ_T0085429.1 MGP_CBAJ_G0032531.1 mouse_genomes_project 7 122919894 122944644 - MGP_CBAJ_P0085429 Rnf141 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085430.1 MGP_CBAJ_G0032531.1 mouse_genomes_project 7 122935760 122968611 - MGP_CBAJ_P0085430 Rnf141 protein_coding protein_coding MGP_CBAJ_T0085431.1 MGP_CBAJ_G0032531.1 mouse_genomes_project 7 122937812 122968504 - MGP_CBAJ_P0085431 Rnf141 protein_coding protein_coding MGP_CBAJ_T0085432.1 MGP_CBAJ_G0032531.1 mouse_genomes_project 7 122938674 122944590 - MGP_CBAJ_P0085432 Rnf141 protein_coding protein_coding MGP_CBAJ_T0085433.1 MGP_CBAJ_G0032531.1 mouse_genomes_project 7 122938803 122944915 - Rnf141 protein_coding retained_intron MGP_CBAJ_T0085434.1 MGP_CBAJ_G0032531.1 mouse_genomes_project 7 122938882 122968280 - MGP_CBAJ_P0085434 Rnf141 protein_coding protein_coding MGP_CBAJ_T0085435.1 MGP_CBAJ_G0032531.1 mouse_genomes_project 7 122939970 122968559 - MGP_CBAJ_P0085435 Rnf141 protein_coding protein_coding MGP_CBAJ_T0085436.1 MGP_CBAJ_G0032531.1 mouse_genomes_project 7 122953961 122968556 - Rnf141 protein_coding processed_transcript MGP_CBAJ_T0085437.1 MGP_CBAJ_G0032531.1 mouse_genomes_project 7 122957068 122968311 - MGP_CBAJ_P0085437 Rnf141 protein_coding protein_coding MGP_CBAJ_T0084126.1 MGP_CBAJ_G0032067.1 mouse_genomes_project 7 87773088 87775801 + MGP_CBAJ_P0084126 Mesp2 protein_coding protein_coding MGP_CBAJ_T0015656.1 MGP_CBAJ_G0013768.1 mouse_genomes_project 7 111859099 111860024 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0102102.1 MGP_CBAJ_G0040132.1 mouse_genomes_project 7 23602944 23603834 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015601.1 MGP_CBAJ_G0013713.1 mouse_genomes_project 7 71386918 71387492 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0084325.1 MGP_CBAJ_G0032105.1 mouse_genomes_project 7 90056141 90065085 - MGP_CBAJ_P0084325 3110040N11Rik protein_coding protein_coding MGP_CBAJ_T0084326.1 MGP_CBAJ_G0032105.1 mouse_genomes_project 7 90058885 90065065 - 3110040N11Rik protein_coding processed_transcript MGP_CBAJ_T0084327.1 MGP_CBAJ_G0032105.1 mouse_genomes_project 7 90058885 90064260 - 3110040N11Rik protein_coding processed_transcript MGP_CBAJ_T0084328.1 MGP_CBAJ_G0032105.1 mouse_genomes_project 7 90058904 90064705 - 3110040N11Rik protein_coding processed_transcript MGP_CBAJ_T0084329.1 MGP_CBAJ_G0032105.1 mouse_genomes_project 7 90058958 90065061 - MGP_CBAJ_P0084329 3110040N11Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0082187.1 MGP_CBAJ_G0031612.1 mouse_genomes_project 7 29299879 29302349 - MGP_CBAJ_P0082187 Zfp36 protein_coding protein_coding MGP_CBAJ_T0084211.1 MGP_CBAJ_G0032083.1 mouse_genomes_project 7 88391388 88405736 - Man2a2 protein_coding retained_intron MGP_CBAJ_T0084212.1 MGP_CBAJ_G0032083.1 mouse_genomes_project 7 88391388 88413814 - MGP_CBAJ_P0084212 Man2a2 protein_coding protein_coding MGP_CBAJ_T0084213.1 MGP_CBAJ_G0032083.1 mouse_genomes_project 7 88393514 88401985 - MGP_CBAJ_P0084213 Man2a2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084214.1 MGP_CBAJ_G0032083.1 mouse_genomes_project 7 88397149 88405946 - Man2a2 protein_coding retained_intron MGP_CBAJ_T0084215.1 MGP_CBAJ_G0032083.1 mouse_genomes_project 7 88401373 88402151 - Man2a2 protein_coding retained_intron MGP_CBAJ_T0084216.1 MGP_CBAJ_G0032083.1 mouse_genomes_project 7 88401956 88405774 - MGP_CBAJ_P0084216 Man2a2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084217.1 MGP_CBAJ_G0032083.1 mouse_genomes_project 7 88402589 88413300 - MGP_CBAJ_P0084217 Man2a2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084218.1 MGP_CBAJ_G0032083.1 mouse_genomes_project 7 88402754 88413565 - Man2a2 protein_coding retained_intron MGP_CBAJ_T0084219.1 MGP_CBAJ_G0032083.1 mouse_genomes_project 7 88404939 88405934 - Man2a2 protein_coding retained_intron MGP_CBAJ_T0084220.1 MGP_CBAJ_G0032083.1 mouse_genomes_project 7 88412074 88413297 - MGP_CBAJ_P0084220 Man2a2 protein_coding protein_coding MGP_CBAJ_T0084221.1 MGP_CBAJ_G0032083.1 mouse_genomes_project 7 88412102 88413521 - MGP_CBAJ_P0084221 Man2a2 protein_coding protein_coding MGP_CBAJ_T0081778.1 MGP_CBAJ_G0031508.1 mouse_genomes_project 7 24617234 24624353 + MGP_CBAJ_P0081778 Lypd3 protein_coding protein_coding MGP_CBAJ_T0082188.1 MGP_CBAJ_G0031613.1 mouse_genomes_project 7 29309156 29315719 - MGP_CBAJ_P0082188 Med29 protein_coding protein_coding MGP_CBAJ_T0084366.1 MGP_CBAJ_G0032116.1 mouse_genomes_project 7 91579631 91586899 + MGP_CBAJ_P0084366 protein_coding protein_coding MGP_CBAJ_T0008899.1 MGP_CBAJ_G0007158.1 mouse_genomes_project 7 129252013 129254113 + Gm45151 lincRNA lincRNA MGP_CBAJ_T0010719.1 MGP_CBAJ_G0008857.1 mouse_genomes_project 7 18919769 18919844 + Mir343 miRNA miRNA MGP_CBAJ_T0008783.1 MGP_CBAJ_G0007084.1 mouse_genomes_project 7 71835854 71893229 - lincRNA lincRNA MGP_CBAJ_T0018083.1 MGP_CBAJ_G0015405.1 mouse_genomes_project 7 47388361 47513533 - 2310002F09Rik processed_transcript antisense MGP_CBAJ_T0018084.1 MGP_CBAJ_G0015405.1 mouse_genomes_project 7 47448036 47451364 - 2310002F09Rik processed_transcript antisense MGP_CBAJ_T0018085.1 MGP_CBAJ_G0015405.1 mouse_genomes_project 7 47462928 47463652 - 2310002F09Rik processed_transcript TEC MGP_CBAJ_T0018086.1 MGP_CBAJ_G0015405.1 mouse_genomes_project 7 47512411 47513546 - 2310002F09Rik processed_transcript antisense MGP_CBAJ_T0087042.1 MGP_CBAJ_G0032882.1 mouse_genomes_project 7 156795203 156803772 - MGP_CBAJ_P0087042 Rnh1 protein_coding protein_coding MGP_CBAJ_T0087043.1 MGP_CBAJ_G0032882.1 mouse_genomes_project 7 156795203 156807683 - MGP_CBAJ_P0087043 Rnh1 protein_coding protein_coding MGP_CBAJ_T0102154.1 MGP_CBAJ_G0040183.1 mouse_genomes_project 7 52527079 52528330 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085149.1 MGP_CBAJ_G0032416.1 mouse_genomes_project 7 116682409 116683378 - MGP_CBAJ_P0085149 Olfr691 protein_coding protein_coding MGP_CBAJ_T0002266.1 MGP_CBAJ_G0002180.1 mouse_genomes_project 7 139105350 139106510 + TEC TEC MGP_CBAJ_T0015487.1 MGP_CBAJ_G0013599.1 mouse_genomes_project 7 12302749 12302927 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0083867.1 MGP_CBAJ_G0032020.1 mouse_genomes_project 7 72561724 72609670 - Lrrk1 protein_coding processed_transcript MGP_CBAJ_T0083868.1 MGP_CBAJ_G0032020.1 mouse_genomes_project 7 72605879 72739770 - MGP_CBAJ_P0083868 Lrrk1 protein_coding protein_coding MGP_CBAJ_T0083869.1 MGP_CBAJ_G0032020.1 mouse_genomes_project 7 72605886 72612694 - Lrrk1 protein_coding retained_intron MGP_CBAJ_T0083870.1 MGP_CBAJ_G0032020.1 mouse_genomes_project 7 72606317 72634512 - MGP_CBAJ_P0083870 Lrrk1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083871.1 MGP_CBAJ_G0032020.1 mouse_genomes_project 7 72613312 72616927 - Lrrk1 protein_coding retained_intron MGP_CBAJ_T0083872.1 MGP_CBAJ_G0032020.1 mouse_genomes_project 7 72690406 72692178 - Lrrk1 protein_coding processed_transcript MGP_CBAJ_T0083873.1 MGP_CBAJ_G0032020.1 mouse_genomes_project 7 72690575 72739727 - Lrrk1 protein_coding retained_intron MGP_CBAJ_T0087212.1 MGP_CBAJ_G0032910.1 mouse_genomes_project 7 157498189 157530847 + MGP_CBAJ_P0087212 Muc5ac protein_coding protein_coding MGP_CBAJ_T0087213.1 MGP_CBAJ_G0032910.1 mouse_genomes_project 7 157498189 157530632 + MGP_CBAJ_P0087213 Muc5ac protein_coding protein_coding MGP_CBAJ_T0087214.1 MGP_CBAJ_G0032910.1 mouse_genomes_project 7 157498245 157530943 + MGP_CBAJ_P0087214 Muc5ac protein_coding protein_coding MGP_CBAJ_T0083362.1 MGP_CBAJ_G0031894.1 mouse_genomes_project 7 49573777 49578527 - protein_coding processed_transcript MGP_CBAJ_T0083363.1 MGP_CBAJ_G0031894.1 mouse_genomes_project 7 49573797 49578569 - protein_coding retained_intron MGP_CBAJ_T0008939.1 MGP_CBAJ_G0007185.1 mouse_genomes_project 7 144083573 144171943 + Gm44868 lincRNA lincRNA MGP_CBAJ_T0008940.1 MGP_CBAJ_G0007185.1 mouse_genomes_project 7 144083661 144087330 + Gm44868 lincRNA lincRNA MGP_CBAJ_T0086003.1 MGP_CBAJ_G0032651.1 mouse_genomes_project 7 140387613 140404851 - MGP_CBAJ_P0086003 Atp2a1 protein_coding protein_coding MGP_CBAJ_T0086004.1 MGP_CBAJ_G0032651.1 mouse_genomes_project 7 140387615 140389401 - MGP_CBAJ_P0086004 Atp2a1 protein_coding protein_coding MGP_CBAJ_T0086005.1 MGP_CBAJ_G0032651.1 mouse_genomes_project 7 140387856 140405550 - MGP_CBAJ_P0086005 Atp2a1 protein_coding unknown_likely_coding MGP_CBAJ_T0082163.1 MGP_CBAJ_G0031607.1 mouse_genomes_project 7 29192837 29201558 - MGP_CBAJ_P0082163 Dll3 protein_coding protein_coding MGP_CBAJ_T0082164.1 MGP_CBAJ_G0031607.1 mouse_genomes_project 7 29192883 29193766 - Dll3 protein_coding processed_transcript MGP_CBAJ_T0082165.1 MGP_CBAJ_G0031607.1 mouse_genomes_project 7 29197997 29201092 - Dll3 protein_coding retained_intron MGP_CBAJ_T0018182.1 MGP_CBAJ_G0015445.1 mouse_genomes_project 7 158926100 158957692 - R74862 processed_transcript processed_transcript MGP_CBAJ_T0018183.1 MGP_CBAJ_G0015445.1 mouse_genomes_project 7 158936937 158957961 - R74862 processed_transcript processed_transcript MGP_CBAJ_T0018184.1 MGP_CBAJ_G0015445.1 mouse_genomes_project 7 158937600 158957952 - R74862 processed_transcript processed_transcript MGP_CBAJ_T0010759.1 MGP_CBAJ_G0008897.1 mouse_genomes_project 7 67592977 67593057 - Mir344d-3 miRNA miRNA MGP_CBAJ_T0082887.1 MGP_CBAJ_G0031767.1 mouse_genomes_project 7 37973212 38044756 - MGP_CBAJ_P0082887 Dpy19l3 protein_coding protein_coding MGP_CBAJ_T0082888.1 MGP_CBAJ_G0031767.1 mouse_genomes_project 7 37978772 37996099 - MGP_CBAJ_P0082888 Dpy19l3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082889.1 MGP_CBAJ_G0031767.1 mouse_genomes_project 7 37995230 37996572 - Dpy19l3 protein_coding retained_intron MGP_CBAJ_T0082890.1 MGP_CBAJ_G0031767.1 mouse_genomes_project 7 37995639 37996658 - Dpy19l3 protein_coding retained_intron MGP_CBAJ_T0082891.1 MGP_CBAJ_G0031767.1 mouse_genomes_project 7 38002166 38017728 - MGP_CBAJ_P0082891 Dpy19l3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082892.1 MGP_CBAJ_G0031767.1 mouse_genomes_project 7 38003974 38011552 - Dpy19l3 protein_coding retained_intron MGP_CBAJ_T0082893.1 MGP_CBAJ_G0031767.1 mouse_genomes_project 7 38007516 38013344 - Dpy19l3 protein_coding processed_transcript MGP_CBAJ_T0082894.1 MGP_CBAJ_G0031767.1 mouse_genomes_project 7 38013358 38017772 - Dpy19l3 protein_coding retained_intron MGP_CBAJ_T0082895.1 MGP_CBAJ_G0031767.1 mouse_genomes_project 7 38017673 38044701 - Dpy19l3 protein_coding processed_transcript MGP_CBAJ_T0082896.1 MGP_CBAJ_G0031767.1 mouse_genomes_project 7 38041613 38044657 - Dpy19l3 protein_coding retained_intron MGP_CBAJ_T0015584.1 MGP_CBAJ_G0013696.1 mouse_genomes_project 7 52679595 52680265 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008774.1 MGP_CBAJ_G0007077.1 mouse_genomes_project 7 66918030 67138977 - lincRNA lincRNA MGP_CBAJ_T0081783.1 MGP_CBAJ_G0031512.1 mouse_genomes_project 7 24773273 24791624 - MGP_CBAJ_P0081783 Cd177 protein_coding protein_coding MGP_CBAJ_T0081784.1 MGP_CBAJ_G0031512.1 mouse_genomes_project 7 24774417 24782359 - Cd177 protein_coding retained_intron MGP_CBAJ_T0015636.1 MGP_CBAJ_G0013748.1 mouse_genomes_project 7 104228585 104228717 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015543.1 MGP_CBAJ_G0013655.1 mouse_genomes_project 7 36594893 36595538 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0085144.1 MGP_CBAJ_G0032411.1 mouse_genomes_project 7 116538432 116539450 - MGP_CBAJ_P0085144 Olfr686 protein_coding protein_coding MGP_CBAJ_T0087125.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157134084 157142231 - MGP_CBAJ_P0087125 Slc25a22 protein_coding protein_coding MGP_CBAJ_T0087126.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157134089 157142166 - Slc25a22 protein_coding retained_intron MGP_CBAJ_T0087127.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157134089 157141970 - MGP_CBAJ_P0087127 Slc25a22 protein_coding protein_coding MGP_CBAJ_T0087128.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157134089 157138935 - MGP_CBAJ_P0087128 Slc25a22 protein_coding protein_coding MGP_CBAJ_T0087129.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157134089 157141976 - MGP_CBAJ_P0087129 Slc25a22 protein_coding protein_coding MGP_CBAJ_T0087130.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157134092 157139682 - Slc25a22 protein_coding retained_intron MGP_CBAJ_T0087131.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157134092 157141977 - MGP_CBAJ_P0087131 Slc25a22 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087132.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157134096 157137094 - MGP_CBAJ_P0087132 Slc25a22 protein_coding protein_coding MGP_CBAJ_T0087133.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157135294 157136379 - Slc25a22 protein_coding retained_intron MGP_CBAJ_T0087134.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157135360 157136400 - Slc25a22 protein_coding retained_intron MGP_CBAJ_T0087135.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157135526 157135939 - MGP_CBAJ_P0087135 Slc25a22 protein_coding protein_coding MGP_CBAJ_T0087136.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157135708 157137189 - Slc25a22 protein_coding retained_intron MGP_CBAJ_T0087137.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157135916 157139738 - MGP_CBAJ_P0087137 Slc25a22 protein_coding protein_coding MGP_CBAJ_T0087138.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157135966 157138764 - MGP_CBAJ_P0087138 Slc25a22 protein_coding protein_coding MGP_CBAJ_T0087139.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157135979 157138656 - MGP_CBAJ_P0087139 Slc25a22 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087140.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157135983 157138348 - MGP_CBAJ_P0087140 Slc25a22 protein_coding protein_coding MGP_CBAJ_T0087141.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157136233 157138311 - Slc25a22 protein_coding retained_intron MGP_CBAJ_T0087142.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157136247 157141932 - MGP_CBAJ_P0087142 Slc25a22 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087143.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157136385 157139664 - Slc25a22 protein_coding processed_transcript MGP_CBAJ_T0087144.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157136451 157141931 - MGP_CBAJ_P0087144 Slc25a22 protein_coding protein_coding MGP_CBAJ_T0087145.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157136925 157139665 - Slc25a22 protein_coding retained_intron MGP_CBAJ_T0087146.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157137041 157138941 - MGP_CBAJ_P0087146 Slc25a22 protein_coding protein_coding MGP_CBAJ_T0087147.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157137937 157138945 - MGP_CBAJ_P0087147 Slc25a22 protein_coding protein_coding MGP_CBAJ_T0087148.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157138270 157138884 - MGP_CBAJ_P0087148 Slc25a22 protein_coding protein_coding MGP_CBAJ_T0087149.1 MGP_CBAJ_G0032898.1 mouse_genomes_project 7 157138302 157138935 - MGP_CBAJ_P0087149 Slc25a22 protein_coding protein_coding MGP_CBAJ_T0008798.1 MGP_CBAJ_G0007093.1 mouse_genomes_project 7 77018401 77019205 - Gm29327 lincRNA lincRNA MGP_CBAJ_T0084050.1 MGP_CBAJ_G0032054.1 mouse_genomes_project 7 86969376 86991940 - MGP_CBAJ_P0084050 Hapln3 protein_coding protein_coding MGP_CBAJ_T0084051.1 MGP_CBAJ_G0032054.1 mouse_genomes_project 7 86970012 86991917 - MGP_CBAJ_P0084051 Hapln3 protein_coding protein_coding MGP_CBAJ_T0084052.1 MGP_CBAJ_G0032054.1 mouse_genomes_project 7 86971295 86991935 - MGP_CBAJ_P0084052 Hapln3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084053.1 MGP_CBAJ_G0032054.1 mouse_genomes_project 7 86976029 86989582 - Hapln3 protein_coding processed_transcript MGP_CBAJ_T0082071.1 MGP_CBAJ_G0031581.1 mouse_genomes_project 7 28045333 28085691 - MGP_CBAJ_P0082071 Sptbn4 protein_coding protein_coding MGP_CBAJ_T0082072.1 MGP_CBAJ_G0031581.1 mouse_genomes_project 7 28045333 28090939 - MGP_CBAJ_P0082072 Sptbn4 protein_coding protein_coding MGP_CBAJ_T0082073.1 MGP_CBAJ_G0031581.1 mouse_genomes_project 7 28045333 28087429 - MGP_CBAJ_P0082073 Sptbn4 protein_coding protein_coding MGP_CBAJ_T0082074.1 MGP_CBAJ_G0031581.1 mouse_genomes_project 7 28045333 28152017 - MGP_CBAJ_P0082074 Sptbn4 protein_coding protein_coding MGP_CBAJ_T0082075.1 MGP_CBAJ_G0031581.1 mouse_genomes_project 7 28045337 28153104 - MGP_CBAJ_P0082075 Sptbn4 protein_coding protein_coding MGP_CBAJ_T0082076.1 MGP_CBAJ_G0031581.1 mouse_genomes_project 7 28133551 28153104 - MGP_CBAJ_P0082076 Sptbn4 protein_coding protein_coding MGP_CBAJ_T0082077.1 MGP_CBAJ_G0031581.1 mouse_genomes_project 7 28151371 28151935 - Sptbn4 protein_coding processed_transcript MGP_CBAJ_T0081460.1 MGP_CBAJ_G0031412.1 mouse_genomes_project 7 18327572 18328084 - Ccdc61 protein_coding retained_intron MGP_CBAJ_T0081461.1 MGP_CBAJ_G0031412.1 mouse_genomes_project 7 18327572 18352241 - MGP_CBAJ_P0081461 Ccdc61 protein_coding protein_coding MGP_CBAJ_T0081462.1 MGP_CBAJ_G0031412.1 mouse_genomes_project 7 18327573 18329263 - MGP_CBAJ_P0081462 Ccdc61 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081463.1 MGP_CBAJ_G0031412.1 mouse_genomes_project 7 18327573 18352224 - MGP_CBAJ_P0081463 Ccdc61 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081464.1 MGP_CBAJ_G0031412.1 mouse_genomes_project 7 18327694 18330678 - MGP_CBAJ_P0081464 Ccdc61 protein_coding protein_coding MGP_CBAJ_T0081465.1 MGP_CBAJ_G0031412.1 mouse_genomes_project 7 18328335 18329069 - Ccdc61 protein_coding retained_intron MGP_CBAJ_T0081466.1 MGP_CBAJ_G0031412.1 mouse_genomes_project 7 18336292 18352224 - MGP_CBAJ_P0081466 Ccdc61 protein_coding protein_coding MGP_CBAJ_T0081467.1 MGP_CBAJ_G0031412.1 mouse_genomes_project 7 18337724 18352215 - MGP_CBAJ_P0081467 Ccdc61 protein_coding protein_coding MGP_CBAJ_T0081444.1 MGP_CBAJ_G0031404.1 mouse_genomes_project 7 17838019 17957928 - MGP_CBAJ_P0081444 protein_coding protein_coding MGP_CBAJ_T0081445.1 MGP_CBAJ_G0031404.1 mouse_genomes_project 7 17850383 17957931 - protein_coding retained_intron MGP_CBAJ_T0086510.1 MGP_CBAJ_G0032743.1 mouse_genomes_project 7 142390584 142416227 + MGP_CBAJ_P0086510 Itgax protein_coding protein_coding MGP_CBAJ_T0086511.1 MGP_CBAJ_G0032743.1 mouse_genomes_project 7 142390588 142395105 + MGP_CBAJ_P0086511 Itgax protein_coding protein_coding MGP_CBAJ_T0086512.1 MGP_CBAJ_G0032743.1 mouse_genomes_project 7 142391372 142415764 + MGP_CBAJ_P0086512 Itgax protein_coding unknown_likely_coding MGP_CBAJ_T0086513.1 MGP_CBAJ_G0032743.1 mouse_genomes_project 7 142395809 142396515 + Itgax protein_coding retained_intron MGP_CBAJ_T0086514.1 MGP_CBAJ_G0032743.1 mouse_genomes_project 7 142411774 142413805 + Itgax protein_coding retained_intron MGP_CBAJ_T0099501.1 MGP_CBAJ_G0037756.1 mouse_genomes_project 7 97119594 97119658 - Gm24249 snRNA snRNA MGP_CBAJ_T0010754.1 MGP_CBAJ_G0008892.1 mouse_genomes_project 7 67538373 67538453 - Gm23962 miRNA miRNA MGP_CBAJ_T0081400.1 MGP_CBAJ_G0031382.1 mouse_genomes_project 7 15918998 15923410 + MGP_CBAJ_P0081400 Ptgir protein_coding protein_coding MGP_CBAJ_T0081401.1 MGP_CBAJ_G0031382.1 mouse_genomes_project 7 15919022 15923405 + MGP_CBAJ_P0081401 Ptgir protein_coding protein_coding MGP_CBAJ_T0084487.1 MGP_CBAJ_G0032172.1 mouse_genomes_project 7 99611742 99674438 + MGP_CBAJ_P0084487 Sytl2 protein_coding protein_coding MGP_CBAJ_T0084488.1 MGP_CBAJ_G0032172.1 mouse_genomes_project 7 99611742 99674438 + MGP_CBAJ_P0084488 Sytl2 protein_coding protein_coding MGP_CBAJ_T0084489.1 MGP_CBAJ_G0032172.1 mouse_genomes_project 7 99611742 99674438 + MGP_CBAJ_P0084489 Sytl2 protein_coding protein_coding MGP_CBAJ_T0084490.1 MGP_CBAJ_G0032172.1 mouse_genomes_project 7 99611742 99674438 + MGP_CBAJ_P0084490 Sytl2 protein_coding protein_coding MGP_CBAJ_T0084491.1 MGP_CBAJ_G0032172.1 mouse_genomes_project 7 99611835 99673546 + MGP_CBAJ_P0084491 Sytl2 protein_coding unknown_likely_coding MGP_CBAJ_T0084492.1 MGP_CBAJ_G0032172.1 mouse_genomes_project 7 99646394 99674438 + Sytl2 protein_coding processed_transcript MGP_CBAJ_T0084493.1 MGP_CBAJ_G0032172.1 mouse_genomes_project 7 99646416 99674438 + Sytl2 protein_coding processed_transcript MGP_CBAJ_T0084494.1 MGP_CBAJ_G0032172.1 mouse_genomes_project 7 99663417 99674438 + Sytl2 protein_coding processed_transcript MGP_CBAJ_T0098092.1 MGP_CBAJ_G0036365.1 mouse_genomes_project 7 106914462 106914555 - Gm25712 rRNA rRNA MGP_CBAJ_T0100727.1 MGP_CBAJ_G0038982.1 mouse_genomes_project 7 49184296 49184383 - Snord35b snoRNA snoRNA MGP_CBAJ_T0082661.1 MGP_CBAJ_G0031724.1 mouse_genomes_project 7 32486104 32488625 + Fam187b protein_coding retained_intron MGP_CBAJ_T0082662.1 MGP_CBAJ_G0031724.1 mouse_genomes_project 7 32486118 32508631 + MGP_CBAJ_P0082662 Fam187b protein_coding protein_coding MGP_CBAJ_T0082663.1 MGP_CBAJ_G0031724.1 mouse_genomes_project 7 32489357 32508637 + MGP_CBAJ_P0082663 Fam187b protein_coding protein_coding MGP_CBAJ_T0082664.1 MGP_CBAJ_G0031724.1 mouse_genomes_project 7 32494184 32508373 + MGP_CBAJ_P0082664 Fam187b protein_coding protein_coding MGP_CBAJ_T0084675.1 MGP_CBAJ_G0032212.1 mouse_genomes_project 7 109473822 109502494 - MGP_CBAJ_P0084675 Dgat2 protein_coding protein_coding MGP_CBAJ_T0081587.1 MGP_CBAJ_G0031446.1 mouse_genomes_project 7 19054525 19069186 + MGP_CBAJ_P0081587 Trappc6a protein_coding nonsense_mediated_decay MGP_CBAJ_T0081588.1 MGP_CBAJ_G0031446.1 mouse_genomes_project 7 19054565 19069193 + MGP_CBAJ_P0081588 Trappc6a protein_coding nonsense_mediated_decay MGP_CBAJ_T0081589.1 MGP_CBAJ_G0031446.1 mouse_genomes_project 7 19054567 19069193 + MGP_CBAJ_P0081589 Trappc6a protein_coding protein_coding MGP_CBAJ_T0081590.1 MGP_CBAJ_G0031446.1 mouse_genomes_project 7 19054581 19069189 + MGP_CBAJ_P0081590 Trappc6a protein_coding protein_coding MGP_CBAJ_T0081591.1 MGP_CBAJ_G0031446.1 mouse_genomes_project 7 19054585 19068366 + Trappc6a protein_coding retained_intron MGP_CBAJ_T0081592.1 MGP_CBAJ_G0031446.1 mouse_genomes_project 7 19067467 19069184 + MGP_CBAJ_P0081592 Trappc6a protein_coding protein_coding MGP_CBAJ_T0015704.1 MGP_CBAJ_G0013816.1 mouse_genomes_project 7 151033303 151034289 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015559.1 MGP_CBAJ_G0013671.1 mouse_genomes_project 7 44755969 44757809 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0080821.1 MGP_CBAJ_G0031192.1 mouse_genomes_project 7 723669 725613 + MGP_CBAJ_P0080821 protein_coding protein_coding MGP_CBAJ_T0080822.1 MGP_CBAJ_G0031192.1 mouse_genomes_project 7 724408 725993 + MGP_CBAJ_P0080822 protein_coding protein_coding MGP_CBAJ_T0080823.1 MGP_CBAJ_G0031192.1 mouse_genomes_project 7 724607 726432 + protein_coding retained_intron MGP_CBAJ_T0080824.1 MGP_CBAJ_G0031192.1 mouse_genomes_project 7 724635 726016 + MGP_CBAJ_P0080824 protein_coding protein_coding MGP_CBAJ_T0080825.1 MGP_CBAJ_G0031192.1 mouse_genomes_project 7 725104 725900 + MGP_CBAJ_P0080825 protein_coding protein_coding MGP_CBAJ_T0080826.1 MGP_CBAJ_G0031192.1 mouse_genomes_project 7 725314 731998 + MGP_CBAJ_P0080826 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080827.1 MGP_CBAJ_G0031192.1 mouse_genomes_project 7 725995 731998 + MGP_CBAJ_P0080827 protein_coding protein_coding MGP_CBAJ_T0082517.1 MGP_CBAJ_G0031695.1 mouse_genomes_project 7 31968686 31971943 + Hspb6 protein_coding processed_transcript MGP_CBAJ_T0082518.1 MGP_CBAJ_G0031695.1 mouse_genomes_project 7 31969032 31971942 + Hspb6 protein_coding processed_transcript MGP_CBAJ_T0082519.1 MGP_CBAJ_G0031695.1 mouse_genomes_project 7 31969776 31971946 + MGP_CBAJ_P0082519 Hspb6 protein_coding protein_coding MGP_CBAJ_T0082520.1 MGP_CBAJ_G0031695.1 mouse_genomes_project 7 31970387 31971147 + Hspb6 protein_coding processed_transcript MGP_CBAJ_T0085102.1 MGP_CBAJ_G0032378.1 mouse_genomes_project 7 115482068 115497286 - protein_coding retained_intron MGP_CBAJ_T0085103.1 MGP_CBAJ_G0032378.1 mouse_genomes_project 7 115482084 115485162 - MGP_CBAJ_P0085103 protein_coding protein_coding MGP_CBAJ_T0085104.1 MGP_CBAJ_G0032378.1 mouse_genomes_project 7 115483359 115493214 - MGP_CBAJ_P0085104 protein_coding protein_coding MGP_CBAJ_T0085105.1 MGP_CBAJ_G0032378.1 mouse_genomes_project 7 115484065 115485159 - protein_coding retained_intron MGP_CBAJ_T0085106.1 MGP_CBAJ_G0032378.1 mouse_genomes_project 7 115487909 115497184 - MGP_CBAJ_P0085106 protein_coding protein_coding MGP_CBAJ_T0018167.1 MGP_CBAJ_G0015437.1 mouse_genomes_project 7 142804507 142820593 + Gm45019 processed_transcript lincRNA MGP_CBAJ_T0018168.1 MGP_CBAJ_G0015437.1 mouse_genomes_project 7 142819239 142820592 + Gm45019 processed_transcript retained_intron MGP_CBAJ_T0085320.1 MGP_CBAJ_G0032491.1 mouse_genomes_project 7 120265268 120266213 + MGP_CBAJ_P0085320 Olfr497 protein_coding protein_coding MGP_CBAJ_T0008828.1 MGP_CBAJ_G0007119.1 mouse_genomes_project 7 82370324 82419886 + Gm44904 lincRNA lincRNA MGP_CBAJ_T0005135.1 MGP_CBAJ_G0004363.1 mouse_genomes_project 7 50854487 50871053 + Gm15700 antisense antisense MGP_CBAJ_T0010771.1 MGP_CBAJ_G0008909.1 mouse_genomes_project 7 68026917 68027005 - Mir344i miRNA miRNA MGP_CBAJ_T0085348.1 MGP_CBAJ_G0032510.1 mouse_genomes_project 7 121068775 121103446 - MGP_CBAJ_P0085348 Lmo1 protein_coding protein_coding MGP_CBAJ_T0081253.1 MGP_CBAJ_G0031336.1 mouse_genomes_project 7 12040877 12118164 - MGP_CBAJ_P0081253 protein_coding protein_coding MGP_CBAJ_T0082860.1 MGP_CBAJ_G0031762.1 mouse_genomes_project 7 37722339 37792708 - MGP_CBAJ_P0082860 protein_coding protein_coding MGP_CBAJ_T0082861.1 MGP_CBAJ_G0031762.1 mouse_genomes_project 7 37724433 37792709 - MGP_CBAJ_P0082861 protein_coding protein_coding MGP_CBAJ_T0082862.1 MGP_CBAJ_G0031762.1 mouse_genomes_project 7 37746823 37792864 - MGP_CBAJ_P0082862 protein_coding protein_coding MGP_CBAJ_T0082863.1 MGP_CBAJ_G0031762.1 mouse_genomes_project 7 37746826 37792916 - MGP_CBAJ_P0082863 protein_coding protein_coding MGP_CBAJ_T0082864.1 MGP_CBAJ_G0031762.1 mouse_genomes_project 7 37746855 37758223 - MGP_CBAJ_P0082864 protein_coding protein_coding MGP_CBAJ_T0082865.1 MGP_CBAJ_G0031762.1 mouse_genomes_project 7 37761990 37792864 - MGP_CBAJ_P0082865 protein_coding protein_coding MGP_CBAJ_T0002202.1 MGP_CBAJ_G0002117.1 mouse_genomes_project 7 69841078 69841437 + TEC TEC MGP_CBAJ_T0082747.1 MGP_CBAJ_G0031740.1 mouse_genomes_project 7 35885843 35887881 - MGP_CBAJ_P0082747 Scgb2b26 protein_coding protein_coding MGP_CBAJ_T0087219.1 MGP_CBAJ_G0032913.1 mouse_genomes_project 7 157676615 157729644 + MGP_CBAJ_P0087219 Brsk2 protein_coding protein_coding MGP_CBAJ_T0087220.1 MGP_CBAJ_G0032913.1 mouse_genomes_project 7 157676615 157734885 + MGP_CBAJ_P0087220 Brsk2 protein_coding protein_coding MGP_CBAJ_T0087221.1 MGP_CBAJ_G0032913.1 mouse_genomes_project 7 157676710 157729811 + MGP_CBAJ_P0087221 Brsk2 protein_coding protein_coding MGP_CBAJ_T0087222.1 MGP_CBAJ_G0032913.1 mouse_genomes_project 7 157677820 157733568 + MGP_CBAJ_P0087222 Brsk2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087223.1 MGP_CBAJ_G0032913.1 mouse_genomes_project 7 157677896 157731589 + MGP_CBAJ_P0087223 Brsk2 protein_coding protein_coding MGP_CBAJ_T0087224.1 MGP_CBAJ_G0032913.1 mouse_genomes_project 7 157677899 157732871 + MGP_CBAJ_P0087224 Brsk2 protein_coding protein_coding MGP_CBAJ_T0087225.1 MGP_CBAJ_G0032913.1 mouse_genomes_project 7 157677899 157734886 + MGP_CBAJ_P0087225 Brsk2 protein_coding protein_coding MGP_CBAJ_T0087226.1 MGP_CBAJ_G0032913.1 mouse_genomes_project 7 157712175 157732786 + MGP_CBAJ_P0087226 Brsk2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087227.1 MGP_CBAJ_G0032913.1 mouse_genomes_project 7 157715487 157732786 + MGP_CBAJ_P0087227 Brsk2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087228.1 MGP_CBAJ_G0032913.1 mouse_genomes_project 7 157715527 157733810 + MGP_CBAJ_P0087228 Brsk2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087229.1 MGP_CBAJ_G0032913.1 mouse_genomes_project 7 157716348 157732786 + MGP_CBAJ_P0087229 Brsk2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087230.1 MGP_CBAJ_G0032913.1 mouse_genomes_project 7 157723792 157732789 + MGP_CBAJ_P0087230 Brsk2 protein_coding protein_coding MGP_CBAJ_T0087231.1 MGP_CBAJ_G0032913.1 mouse_genomes_project 7 157723848 157733115 + MGP_CBAJ_P0087231 Brsk2 protein_coding protein_coding MGP_CBAJ_T0087232.1 MGP_CBAJ_G0032913.1 mouse_genomes_project 7 157728108 157734706 + Brsk2 protein_coding processed_transcript MGP_CBAJ_T0087233.1 MGP_CBAJ_G0032913.1 mouse_genomes_project 7 157728136 157733314 + Brsk2 protein_coding processed_transcript MGP_CBAJ_T0087234.1 MGP_CBAJ_G0032913.1 mouse_genomes_project 7 157729299 157732080 + MGP_CBAJ_P0087234 Brsk2 protein_coding protein_coding MGP_CBAJ_T0005200.1 MGP_CBAJ_G0004408.1 mouse_genomes_project 7 134818771 134956478 - 4933432K03Rik antisense antisense MGP_CBAJ_T0005201.1 MGP_CBAJ_G0004408.1 mouse_genomes_project 7 134920687 134956480 - 4933432K03Rik antisense antisense MGP_CBAJ_T0005202.1 MGP_CBAJ_G0004408.1 mouse_genomes_project 7 134955919 134978329 - 4933432K03Rik antisense antisense MGP_CBAJ_T0015631.1 MGP_CBAJ_G0013743.1 mouse_genomes_project 7 95816590 95817523 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008760.1 MGP_CBAJ_G0007066.1 mouse_genomes_project 7 44041203 44073747 - lincRNA lincRNA MGP_CBAJ_T0008699.1 MGP_CBAJ_G0007016.1 mouse_genomes_project 7 11103434 11106023 + Gm29638 lincRNA lincRNA MGP_CBAJ_T0010706.1 MGP_CBAJ_G0008844.1 mouse_genomes_project 7 177724 177793 + Mir295 miRNA miRNA MGP_CBAJ_T0015625.1 MGP_CBAJ_G0013737.1 mouse_genomes_project 7 89681162 89681939 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0082969.1 MGP_CBAJ_G0031785.1 mouse_genomes_project 7 45058426 45084885 - MGP_CBAJ_P0082969 protein_coding protein_coding MGP_CBAJ_T0084109.1 MGP_CBAJ_G0032062.1 mouse_genomes_project 7 87645330 87663045 - MGP_CBAJ_P0084109 Kif7 protein_coding protein_coding MGP_CBAJ_T0084110.1 MGP_CBAJ_G0032062.1 mouse_genomes_project 7 87645331 87661412 - MGP_CBAJ_P0084110 Kif7 protein_coding protein_coding MGP_CBAJ_T0084111.1 MGP_CBAJ_G0032062.1 mouse_genomes_project 7 87645331 87661412 - MGP_CBAJ_P0084111 Kif7 protein_coding protein_coding MGP_CBAJ_T0084112.1 MGP_CBAJ_G0032062.1 mouse_genomes_project 7 87645755 87662994 - MGP_CBAJ_P0084112 Kif7 protein_coding protein_coding MGP_CBAJ_T0010812.1 MGP_CBAJ_G0008950.1 mouse_genomes_project 7 157722817 157722880 + Mir3104 miRNA miRNA MGP_CBAJ_T0099497.1 MGP_CBAJ_G0037752.1 mouse_genomes_project 7 83054012 83054096 + Gm25282 snRNA snRNA MGP_CBAJ_T0086006.1 MGP_CBAJ_G0032652.1 mouse_genomes_project 7 140408706 140416803 - MGP_CBAJ_P0086006 Sh2b1 protein_coding protein_coding MGP_CBAJ_T0086007.1 MGP_CBAJ_G0032652.1 mouse_genomes_project 7 140408708 140416816 - MGP_CBAJ_P0086007 Sh2b1 protein_coding protein_coding MGP_CBAJ_T0086008.1 MGP_CBAJ_G0032652.1 mouse_genomes_project 7 140408709 140416843 - MGP_CBAJ_P0086008 Sh2b1 protein_coding protein_coding MGP_CBAJ_T0086009.1 MGP_CBAJ_G0032652.1 mouse_genomes_project 7 140408711 140416537 - MGP_CBAJ_P0086009 Sh2b1 protein_coding protein_coding MGP_CBAJ_T0086010.1 MGP_CBAJ_G0032652.1 mouse_genomes_project 7 140408711 140414781 - MGP_CBAJ_P0086010 Sh2b1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086011.1 MGP_CBAJ_G0032652.1 mouse_genomes_project 7 140408711 140416535 - MGP_CBAJ_P0086011 Sh2b1 protein_coding protein_coding MGP_CBAJ_T0086012.1 MGP_CBAJ_G0032652.1 mouse_genomes_project 7 140408717 140416763 - MGP_CBAJ_P0086012 Sh2b1 protein_coding protein_coding MGP_CBAJ_T0086013.1 MGP_CBAJ_G0032652.1 mouse_genomes_project 7 140410611 140411907 - Sh2b1 protein_coding processed_transcript MGP_CBAJ_T0086014.1 MGP_CBAJ_G0032652.1 mouse_genomes_project 7 140414504 140417137 - MGP_CBAJ_P0086014 Sh2b1 protein_coding protein_coding MGP_CBAJ_T0010814.1 MGP_CBAJ_G0008952.1 mouse_genomes_project 7 158515817 158515890 - Mir483 miRNA miRNA MGP_CBAJ_T0083515.1 MGP_CBAJ_G0031933.1 mouse_genomes_project 7 50514367 50587202 + MGP_CBAJ_P0083515 Otog protein_coding protein_coding MGP_CBAJ_T0100721.1 MGP_CBAJ_G0038976.1 mouse_genomes_project 7 37119761 37119891 - Gm25922 snoRNA snoRNA MGP_CBAJ_T0086895.1 MGP_CBAJ_G0032827.1 mouse_genomes_project 7 155468137 155481773 - Adam8 protein_coding retained_intron MGP_CBAJ_T0086896.1 MGP_CBAJ_G0032827.1 mouse_genomes_project 7 155468137 155477642 - Adam8 protein_coding retained_intron MGP_CBAJ_T0086897.1 MGP_CBAJ_G0032827.1 mouse_genomes_project 7 155468137 155481773 - MGP_CBAJ_P0086897 Adam8 protein_coding protein_coding MGP_CBAJ_T0086898.1 MGP_CBAJ_G0032827.1 mouse_genomes_project 7 155468137 155481759 - MGP_CBAJ_P0086898 Adam8 protein_coding protein_coding MGP_CBAJ_T0086899.1 MGP_CBAJ_G0032827.1 mouse_genomes_project 7 155468599 155469568 - Adam8 protein_coding processed_transcript MGP_CBAJ_T0086900.1 MGP_CBAJ_G0032827.1 mouse_genomes_project 7 155473061 155481773 - MGP_CBAJ_P0086900 Adam8 protein_coding protein_coding MGP_CBAJ_T0086901.1 MGP_CBAJ_G0032827.1 mouse_genomes_project 7 155476861 155477638 - Adam8 protein_coding processed_transcript MGP_CBAJ_T0086902.1 MGP_CBAJ_G0032827.1 mouse_genomes_project 7 155478626 155481719 - MGP_CBAJ_P0086902 Adam8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0005185.1 MGP_CBAJ_G0004397.1 mouse_genomes_project 7 115463562 115464409 - antisense antisense MGP_CBAJ_T0086524.1 MGP_CBAJ_G0032748.1 mouse_genomes_project 7 142526992 142541388 + MGP_CBAJ_P0086524 Tgfb1i1 protein_coding protein_coding MGP_CBAJ_T0086525.1 MGP_CBAJ_G0032748.1 mouse_genomes_project 7 142530532 142539093 + MGP_CBAJ_P0086525 Tgfb1i1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086526.1 MGP_CBAJ_G0032748.1 mouse_genomes_project 7 142530549 142539396 + MGP_CBAJ_P0086526 Tgfb1i1 protein_coding protein_coding MGP_CBAJ_T0086527.1 MGP_CBAJ_G0032748.1 mouse_genomes_project 7 142530567 142539054 + MGP_CBAJ_P0086527 Tgfb1i1 protein_coding protein_coding MGP_CBAJ_T0086528.1 MGP_CBAJ_G0032748.1 mouse_genomes_project 7 142530567 142539400 + MGP_CBAJ_P0086528 Tgfb1i1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086529.1 MGP_CBAJ_G0032748.1 mouse_genomes_project 7 142531589 142539400 + Tgfb1i1 protein_coding retained_intron MGP_CBAJ_T0086530.1 MGP_CBAJ_G0032748.1 mouse_genomes_project 7 142531589 142539400 + Tgfb1i1 protein_coding retained_intron MGP_CBAJ_T0086531.1 MGP_CBAJ_G0032748.1 mouse_genomes_project 7 142531589 142539400 + Tgfb1i1 protein_coding retained_intron MGP_CBAJ_T0086532.1 MGP_CBAJ_G0032748.1 mouse_genomes_project 7 142531589 142539400 + Tgfb1i1 protein_coding retained_intron MGP_CBAJ_T0086533.1 MGP_CBAJ_G0032748.1 mouse_genomes_project 7 142531589 142539400 + Tgfb1i1 protein_coding retained_intron MGP_CBAJ_T0086534.1 MGP_CBAJ_G0032748.1 mouse_genomes_project 7 142531747 142539055 + MGP_CBAJ_P0086534 Tgfb1i1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0015682.1 MGP_CBAJ_G0013794.1 mouse_genomes_project 7 138842141 138842798 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0082880.1 MGP_CBAJ_G0031766.1 mouse_genomes_project 7 37924453 37930133 - MGP_CBAJ_P0082880 Pdcd5 protein_coding protein_coding MGP_CBAJ_T0082881.1 MGP_CBAJ_G0031766.1 mouse_genomes_project 7 37924483 37929821 - MGP_CBAJ_P0082881 Pdcd5 protein_coding protein_coding MGP_CBAJ_T0082882.1 MGP_CBAJ_G0031766.1 mouse_genomes_project 7 37924485 37925654 - Pdcd5 protein_coding retained_intron MGP_CBAJ_T0082883.1 MGP_CBAJ_G0031766.1 mouse_genomes_project 7 37924487 37926465 - Pdcd5 protein_coding retained_intron MGP_CBAJ_T0082884.1 MGP_CBAJ_G0031766.1 mouse_genomes_project 7 37926431 37930116 - Pdcd5 protein_coding retained_intron MGP_CBAJ_T0082885.1 MGP_CBAJ_G0031766.1 mouse_genomes_project 7 37926797 37930092 - Pdcd5 protein_coding retained_intron MGP_CBAJ_T0082886.1 MGP_CBAJ_G0031766.1 mouse_genomes_project 7 37928277 37930078 - Pdcd5 protein_coding retained_intron MGP_CBAJ_T0086353.1 MGP_CBAJ_G0032713.1 mouse_genomes_project 7 141647198 141697100 + MGP_CBAJ_P0086353 Gm42715 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086355.1 MGP_CBAJ_G0032713.1 mouse_genomes_project 7 141690125 141693238 + MGP_CBAJ_P0086355 Gm42715 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083582.1 MGP_CBAJ_G0031948.1 mouse_genomes_project 7 51343030 51361046 - MGP_CBAJ_P0083582 Spty2d1 protein_coding protein_coding MGP_CBAJ_T0083250.1 MGP_CBAJ_G0031858.1 mouse_genomes_project 7 48979457 49000348 + MGP_CBAJ_P0083250 Tsks protein_coding protein_coding MGP_CBAJ_T0083251.1 MGP_CBAJ_G0031858.1 mouse_genomes_project 7 48979457 49000348 + MGP_CBAJ_P0083251 Tsks protein_coding protein_coding MGP_CBAJ_T0086231.1 MGP_CBAJ_G0032687.1 mouse_genomes_project 7 141023948 141027629 - MGP_CBAJ_P0086231 Prrt2 protein_coding protein_coding MGP_CBAJ_T0086232.1 MGP_CBAJ_G0032687.1 mouse_genomes_project 7 141023960 141027392 - Prrt2 protein_coding retained_intron MGP_CBAJ_T0086233.1 MGP_CBAJ_G0032687.1 mouse_genomes_project 7 141024065 141026320 - MGP_CBAJ_P0086233 Prrt2 protein_coding protein_coding MGP_CBAJ_T0086234.1 MGP_CBAJ_G0032687.1 mouse_genomes_project 7 141024575 141026013 - MGP_CBAJ_P0086234 Prrt2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086235.1 MGP_CBAJ_G0032687.1 mouse_genomes_project 7 141024924 141027374 - Prrt2 protein_coding processed_transcript MGP_CBAJ_T0086236.1 MGP_CBAJ_G0032687.1 mouse_genomes_project 7 141025121 141027555 - MGP_CBAJ_P0086236 Prrt2 protein_coding protein_coding MGP_CBAJ_T0086237.1 MGP_CBAJ_G0032687.1 mouse_genomes_project 7 141025812 141026773 - Prrt2 protein_coding processed_transcript MGP_CBAJ_T0015576.1 MGP_CBAJ_G0013688.1 mouse_genomes_project 7 47167990 47168543 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0083254.1 MGP_CBAJ_G0031861.1 mouse_genomes_project 7 49021851 49031049 - MGP_CBAJ_P0083254 protein_coding protein_coding MGP_CBAJ_T0005084.1 MGP_CBAJ_G0004326.1 mouse_genomes_project 7 24611935 24618601 - Gm26550 antisense antisense MGP_CBAJ_T0085302.1 MGP_CBAJ_G0032473.1 mouse_genomes_project 7 119676746 119677829 + MGP_CBAJ_P0085302 Olfr472 protein_coding protein_coding MGP_CBAJ_T0084360.1 MGP_CBAJ_G0032114.1 mouse_genomes_project 7 91002587 91028189 + MGP_CBAJ_P0084360 Efl1 protein_coding protein_coding MGP_CBAJ_T0084361.1 MGP_CBAJ_G0032114.1 mouse_genomes_project 7 91002587 91135797 + MGP_CBAJ_P0084361 Efl1 protein_coding protein_coding MGP_CBAJ_T0084362.1 MGP_CBAJ_G0032114.1 mouse_genomes_project 7 91002602 91051813 + Efl1 protein_coding retained_intron MGP_CBAJ_T0084363.1 MGP_CBAJ_G0032114.1 mouse_genomes_project 7 91002614 91135797 + MGP_CBAJ_P0084363 Efl1 protein_coding protein_coding MGP_CBAJ_T0084364.1 MGP_CBAJ_G0032114.1 mouse_genomes_project 7 91023863 91028178 + Efl1 protein_coding processed_transcript MGP_CBAJ_T0081594.1 MGP_CBAJ_G0031448.1 mouse_genomes_project 7 19092832 19127810 - MGP_CBAJ_P0081594 Ppp1r37 protein_coding protein_coding MGP_CBAJ_T0002255.1 MGP_CBAJ_G0002169.1 mouse_genomes_project 7 135225347 135226961 - TEC TEC MGP_CBAJ_T0081154.1 MGP_CBAJ_G0031307.1 mouse_genomes_project 7 10793613 10835382 - MGP_CBAJ_P0081154 Vmn2r56 protein_coding protein_coding MGP_CBAJ_T0082322.1 MGP_CBAJ_G0031645.1 mouse_genomes_project 7 30319321 30328370 - MGP_CBAJ_P0082322 Psmd8 protein_coding protein_coding MGP_CBAJ_T0082323.1 MGP_CBAJ_G0031645.1 mouse_genomes_project 7 30319321 30328491 - MGP_CBAJ_P0082323 Psmd8 protein_coding protein_coding MGP_CBAJ_T0082324.1 MGP_CBAJ_G0031645.1 mouse_genomes_project 7 30319321 30328519 - MGP_CBAJ_P0082324 Psmd8 protein_coding protein_coding MGP_CBAJ_T0081068.1 MGP_CBAJ_G0031256.1 mouse_genomes_project 7 3555219 3575466 + MGP_CBAJ_P0081068 Galp protein_coding protein_coding MGP_CBAJ_T0081069.1 MGP_CBAJ_G0031256.1 mouse_genomes_project 7 3560249 3570755 + Galp protein_coding processed_transcript MGP_CBAJ_T0099534.1 MGP_CBAJ_G0037789.1 mouse_genomes_project 7 157825965 157826072 - Gm25416 snRNA snRNA MGP_CBAJ_T0087086.1 MGP_CBAJ_G0032889.1 mouse_genomes_project 7 156931595 156939297 - MGP_CBAJ_P0087086 Cdhr5 protein_coding protein_coding MGP_CBAJ_T0087087.1 MGP_CBAJ_G0032889.1 mouse_genomes_project 7 156931595 156939297 - MGP_CBAJ_P0087087 Cdhr5 protein_coding protein_coding MGP_CBAJ_T0081259.1 MGP_CBAJ_G0031341.1 mouse_genomes_project 7 12819625 12851323 - MGP_CBAJ_P0081259 Sult2a8 protein_coding protein_coding MGP_CBAJ_T0081260.1 MGP_CBAJ_G0031341.1 mouse_genomes_project 7 12819628 12858213 - MGP_CBAJ_P0081260 Sult2a8 protein_coding protein_coding MGP_CBAJ_T0081261.1 MGP_CBAJ_G0031341.1 mouse_genomes_project 7 12825072 12858396 - MGP_CBAJ_P0081261 Sult2a8 protein_coding protein_coding MGP_CBAJ_T0084676.1 MGP_CBAJ_G0032213.1 mouse_genomes_project 7 109544844 109564453 - MGP_CBAJ_P0084676 Mogat2 protein_coding protein_coding MGP_CBAJ_T0084677.1 MGP_CBAJ_G0032213.1 mouse_genomes_project 7 109552257 109564428 - Mogat2 protein_coding processed_transcript MGP_CBAJ_T0081681.1 MGP_CBAJ_G0031481.1 mouse_genomes_project 7 23800423 23801247 + MGP_CBAJ_P0081681 protein_coding protein_coding MGP_CBAJ_T0015595.1 MGP_CBAJ_G0013707.1 mouse_genomes_project 7 62375174 62375594 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0087453.1 MGP_CBAJ_G0032960.1 mouse_genomes_project 7 160662055 160821085 - MGP_CBAJ_P0087453 Ano1 protein_coding protein_coding MGP_CBAJ_T0087454.1 MGP_CBAJ_G0032960.1 mouse_genomes_project 7 160662055 160821108 - MGP_CBAJ_P0087454 Ano1 protein_coding protein_coding MGP_CBAJ_T0087455.1 MGP_CBAJ_G0032960.1 mouse_genomes_project 7 160662059 160821134 - MGP_CBAJ_P0087455 Ano1 protein_coding protein_coding MGP_CBAJ_T0087456.1 MGP_CBAJ_G0032960.1 mouse_genomes_project 7 160668948 160683644 - Ano1 protein_coding retained_intron MGP_CBAJ_T0087457.1 MGP_CBAJ_G0032960.1 mouse_genomes_project 7 160698061 160749154 - MGP_CBAJ_P0087457 Ano1 protein_coding protein_coding MGP_CBAJ_T0087458.1 MGP_CBAJ_G0032960.1 mouse_genomes_project 7 160730183 160834525 - MGP_CBAJ_P0087458 Ano1 protein_coding protein_coding MGP_CBAJ_T0087459.1 MGP_CBAJ_G0032960.1 mouse_genomes_project 7 160733783 160749151 - Ano1 protein_coding retained_intron MGP_CBAJ_T0087460.1 MGP_CBAJ_G0032960.1 mouse_genomes_project 7 160735289 160758621 - MGP_CBAJ_P0087460 Ano1 protein_coding protein_coding MGP_CBAJ_T0085946.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 139962421 140018892 - MGP_CBAJ_P0085946 Xpo6 protein_coding unknown_likely_coding MGP_CBAJ_T0085947.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 139964073 140079093 - MGP_CBAJ_P0085947 Xpo6 protein_coding protein_coding MGP_CBAJ_T0085948.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 139964074 140079000 - MGP_CBAJ_P0085948 Xpo6 protein_coding protein_coding MGP_CBAJ_T0085949.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 139964079 139975214 - Xpo6 protein_coding retained_intron MGP_CBAJ_T0085950.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 139964079 140031920 - Xpo6 protein_coding processed_transcript MGP_CBAJ_T0085951.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 139964079 139969971 - MGP_CBAJ_P0085951 Xpo6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085952.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 139964092 139972329 - MGP_CBAJ_P0085952 Xpo6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085953.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 139964427 139970184 - Xpo6 protein_coding retained_intron MGP_CBAJ_T0085954.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 139964704 139972292 - MGP_CBAJ_P0085954 Xpo6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085955.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 139969919 139978082 - MGP_CBAJ_P0085955 Xpo6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085956.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 139973683 139978014 - MGP_CBAJ_P0085956 Xpo6 protein_coding protein_coding MGP_CBAJ_T0085957.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 139978087 140007880 - MGP_CBAJ_P0085957 Xpo6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085958.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 139985644 140079014 - Xpo6 protein_coding retained_intron MGP_CBAJ_T0085959.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 139995479 140022401 - MGP_CBAJ_P0085959 Xpo6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085960.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 140007860 140032061 - MGP_CBAJ_P0085960 Xpo6 protein_coding protein_coding MGP_CBAJ_T0085961.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 140018661 140032069 - Xpo6 protein_coding processed_transcript MGP_CBAJ_T0085962.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 140021053 140078934 - Xpo6 protein_coding processed_transcript MGP_CBAJ_T0085963.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 140032056 140078520 - MGP_CBAJ_P0085963 Xpo6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085964.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 140042793 140057871 - Xpo6 protein_coding processed_transcript MGP_CBAJ_T0085965.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 140042793 140079005 - MGP_CBAJ_P0085965 Xpo6 protein_coding protein_coding MGP_CBAJ_T0085966.1 MGP_CBAJ_G0032644.1 mouse_genomes_project 7 140056007 140065693 - Xpo6 protein_coding retained_intron MGP_CBAJ_T0082630.1 MGP_CBAJ_G0031718.1 mouse_genomes_project 7 32350277 32363700 - MGP_CBAJ_P0082630 Cd22 protein_coding protein_coding MGP_CBAJ_T0082631.1 MGP_CBAJ_G0031718.1 mouse_genomes_project 7 32350702 32364941 - MGP_CBAJ_P0082631 Cd22 protein_coding protein_coding MGP_CBAJ_T0082632.1 MGP_CBAJ_G0031718.1 mouse_genomes_project 7 32350702 32364737 - MGP_CBAJ_P0082632 Cd22 protein_coding protein_coding MGP_CBAJ_T0082633.1 MGP_CBAJ_G0031718.1 mouse_genomes_project 7 32350702 32364706 - MGP_CBAJ_P0082633 Cd22 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082634.1 MGP_CBAJ_G0031718.1 mouse_genomes_project 7 32350704 32363117 - MGP_CBAJ_P0082634 Cd22 protein_coding protein_coding MGP_CBAJ_T0082635.1 MGP_CBAJ_G0031718.1 mouse_genomes_project 7 32351138 32365006 - MGP_CBAJ_P0082635 Cd22 protein_coding protein_coding MGP_CBAJ_T0082636.1 MGP_CBAJ_G0031718.1 mouse_genomes_project 7 32351164 32364951 - MGP_CBAJ_P0082636 Cd22 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082637.1 MGP_CBAJ_G0031718.1 mouse_genomes_project 7 32355343 32358140 - MGP_CBAJ_P0082637 Cd22 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082638.1 MGP_CBAJ_G0031718.1 mouse_genomes_project 7 32360731 32363896 - Cd22 protein_coding processed_transcript MGP_CBAJ_T0082639.1 MGP_CBAJ_G0031718.1 mouse_genomes_project 7 32362106 32364933 - MGP_CBAJ_P0082639 Cd22 protein_coding protein_coding MGP_CBAJ_T0082640.1 MGP_CBAJ_G0031718.1 mouse_genomes_project 7 32362246 32362770 - Cd22 protein_coding retained_intron MGP_CBAJ_T0082641.1 MGP_CBAJ_G0031718.1 mouse_genomes_project 7 32362286 32364950 - Cd22 protein_coding processed_transcript MGP_CBAJ_T0082642.1 MGP_CBAJ_G0031718.1 mouse_genomes_project 7 32362325 32364950 - Cd22 protein_coding processed_transcript MGP_CBAJ_T0082643.1 MGP_CBAJ_G0031718.1 mouse_genomes_project 7 32362401 32364940 - MGP_CBAJ_P0082643 Cd22 protein_coding protein_coding MGP_CBAJ_T0082644.1 MGP_CBAJ_G0031718.1 mouse_genomes_project 7 32363864 32365014 - Cd22 protein_coding processed_transcript MGP_CBAJ_T0085739.1 MGP_CBAJ_G0032595.1 mouse_genomes_project 7 133295287 133311834 - MGP_CBAJ_P0085739 Zp2 protein_coding protein_coding MGP_CBAJ_T0100726.1 MGP_CBAJ_G0038981.1 mouse_genomes_project 7 48152110 48152203 + Gm23991 snoRNA snoRNA MGP_CBAJ_T0086062.1 MGP_CBAJ_G0032661.1 mouse_genomes_project 7 140604047 140622442 + Sgf29 protein_coding processed_transcript MGP_CBAJ_T0086063.1 MGP_CBAJ_G0032661.1 mouse_genomes_project 7 140604047 140633744 + MGP_CBAJ_P0086063 Sgf29 protein_coding protein_coding MGP_CBAJ_T0086064.1 MGP_CBAJ_G0032661.1 mouse_genomes_project 7 140604050 140623388 + MGP_CBAJ_P0086064 Sgf29 protein_coding protein_coding MGP_CBAJ_T0086065.1 MGP_CBAJ_G0032661.1 mouse_genomes_project 7 140604060 140622537 + Sgf29 protein_coding retained_intron MGP_CBAJ_T0086066.1 MGP_CBAJ_G0032661.1 mouse_genomes_project 7 140604085 140632700 + Sgf29 protein_coding retained_intron MGP_CBAJ_T0086067.1 MGP_CBAJ_G0032661.1 mouse_genomes_project 7 140604140 140633058 + MGP_CBAJ_P0086067 Sgf29 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086068.1 MGP_CBAJ_G0032661.1 mouse_genomes_project 7 140619509 140633137 + MGP_CBAJ_P0086068 Sgf29 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086069.1 MGP_CBAJ_G0032661.1 mouse_genomes_project 7 140622230 140631507 + Sgf29 protein_coding retained_intron MGP_CBAJ_T0086070.1 MGP_CBAJ_G0032661.1 mouse_genomes_project 7 140632395 140633211 + MGP_CBAJ_P0086070 Sgf29 protein_coding protein_coding MGP_CBAJ_T0086071.1 MGP_CBAJ_G0032661.1 mouse_genomes_project 7 140632849 140633598 + Sgf29 protein_coding processed_transcript MGP_CBAJ_T0015573.1 MGP_CBAJ_G0013685.1 mouse_genomes_project 7 46987201 46987439 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0086682.1 MGP_CBAJ_G0032774.1 mouse_genomes_project 7 146099920 146116778 - MGP_CBAJ_P0086682 protein_coding protein_coding MGP_CBAJ_T0086683.1 MGP_CBAJ_G0032774.1 mouse_genomes_project 7 146100789 146116895 - MGP_CBAJ_P0086683 protein_coding protein_coding MGP_CBAJ_T0086684.1 MGP_CBAJ_G0032774.1 mouse_genomes_project 7 146104143 146115480 - MGP_CBAJ_P0086684 protein_coding protein_coding MGP_CBAJ_T0085279.1 MGP_CBAJ_G0032457.1 mouse_genomes_project 7 118709932 118711670 - MGP_CBAJ_P0085279 Olfr2 protein_coding protein_coding MGP_CBAJ_T0085470.1 MGP_CBAJ_G0032538.1 mouse_genomes_project 7 124359587 124414601 - MGP_CBAJ_P0085470 Dkk3 protein_coding protein_coding MGP_CBAJ_T0010713.1 MGP_CBAJ_G0008851.1 mouse_genomes_project 7 8802080 8802156 - Gm23087 miRNA miRNA MGP_CBAJ_T0002259.1 MGP_CBAJ_G0002173.1 mouse_genomes_project 7 135861491 135863259 + TEC TEC MGP_CBAJ_T0081120.1 MGP_CBAJ_G0031283.1 mouse_genomes_project 7 8236358 8237354 + MGP_CBAJ_P0081120 Vmn1r67 protein_coding protein_coding MGP_CBAJ_T0008908.1 MGP_CBAJ_G0007166.1 mouse_genomes_project 7 138654375 138660875 + Gm45092 lincRNA lincRNA MGP_CBAJ_T0084780.1 MGP_CBAJ_G0032241.1 mouse_genomes_project 7 111127231 111162355 + MGP_CBAJ_P0084780 Rab6a protein_coding protein_coding MGP_CBAJ_T0084781.1 MGP_CBAJ_G0032241.1 mouse_genomes_project 7 111127410 111162355 + MGP_CBAJ_P0084781 Rab6a protein_coding protein_coding MGP_CBAJ_T0084782.1 MGP_CBAJ_G0032241.1 mouse_genomes_project 7 111127514 111162355 + MGP_CBAJ_P0084782 Rab6a protein_coding protein_coding MGP_CBAJ_T0084783.1 MGP_CBAJ_G0032241.1 mouse_genomes_project 7 111153889 111160445 + Rab6a protein_coding retained_intron MGP_CBAJ_T0081171.1 MGP_CBAJ_G0031313.1 mouse_genomes_project 7 11058595 11062992 + MGP_CBAJ_P0081171 Rps5 protein_coding protein_coding MGP_CBAJ_T0081172.1 MGP_CBAJ_G0031313.1 mouse_genomes_project 7 11058595 11062991 + MGP_CBAJ_P0081172 Rps5 protein_coding protein_coding MGP_CBAJ_T0081173.1 MGP_CBAJ_G0031313.1 mouse_genomes_project 7 11058623 11062800 + MGP_CBAJ_P0081173 Rps5 protein_coding protein_coding MGP_CBAJ_T0081174.1 MGP_CBAJ_G0031313.1 mouse_genomes_project 7 11058636 11062525 + Rps5 protein_coding retained_intron MGP_CBAJ_T0081175.1 MGP_CBAJ_G0031313.1 mouse_genomes_project 7 11058641 11059670 + Rps5 protein_coding retained_intron MGP_CBAJ_T0081176.1 MGP_CBAJ_G0031313.1 mouse_genomes_project 7 11058742 11062800 + MGP_CBAJ_P0081176 Rps5 protein_coding protein_coding MGP_CBAJ_T0081177.1 MGP_CBAJ_G0031313.1 mouse_genomes_project 7 11062342 11062990 + Rps5 protein_coding retained_intron MGP_CBAJ_T0002215.1 MGP_CBAJ_G0002130.1 mouse_genomes_project 7 80698499 80699746 - TEC TEC MGP_CBAJ_T0081853.1 MGP_CBAJ_G0031526.1 mouse_genomes_project 7 25357904 25363987 + MGP_CBAJ_P0081853 Zfp526 protein_coding protein_coding MGP_CBAJ_T0082491.1 MGP_CBAJ_G0031688.1 mouse_genomes_project 7 31817334 31821998 + MGP_CBAJ_P0082491 Nfkbid protein_coding protein_coding MGP_CBAJ_T0082492.1 MGP_CBAJ_G0031688.1 mouse_genomes_project 7 31819369 31820073 + Nfkbid protein_coding retained_intron MGP_CBAJ_T0080894.1 MGP_CBAJ_G0031206.1 mouse_genomes_project 7 1609204 1618475 + MGP_CBAJ_P0080894 Eps8l1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080895.1 MGP_CBAJ_G0031206.1 mouse_genomes_project 7 1609204 1617732 + MGP_CBAJ_P0080895 Eps8l1 protein_coding protein_coding MGP_CBAJ_T0080896.1 MGP_CBAJ_G0031206.1 mouse_genomes_project 7 1609213 1627856 + MGP_CBAJ_P0080896 Eps8l1 protein_coding protein_coding MGP_CBAJ_T0080897.1 MGP_CBAJ_G0031206.1 mouse_genomes_project 7 1612997 1619339 + MGP_CBAJ_P0080897 Eps8l1 protein_coding protein_coding MGP_CBAJ_T0080898.1 MGP_CBAJ_G0031206.1 mouse_genomes_project 7 1613239 1617874 + Eps8l1 protein_coding retained_intron MGP_CBAJ_T0080899.1 MGP_CBAJ_G0031206.1 mouse_genomes_project 7 1613246 1618684 + Eps8l1 protein_coding retained_intron MGP_CBAJ_T0080900.1 MGP_CBAJ_G0031206.1 mouse_genomes_project 7 1613246 1627694 + MGP_CBAJ_P0080900 Eps8l1 protein_coding protein_coding MGP_CBAJ_T0080901.1 MGP_CBAJ_G0031206.1 mouse_genomes_project 7 1613273 1618547 + MGP_CBAJ_P0080901 Eps8l1 protein_coding protein_coding MGP_CBAJ_T0080902.1 MGP_CBAJ_G0031206.1 mouse_genomes_project 7 1613353 1628939 + MGP_CBAJ_P0080902 Eps8l1 protein_coding protein_coding MGP_CBAJ_T0080903.1 MGP_CBAJ_G0031206.1 mouse_genomes_project 7 1613365 1627692 + MGP_CBAJ_P0080903 Eps8l1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080904.1 MGP_CBAJ_G0031206.1 mouse_genomes_project 7 1613373 1618424 + MGP_CBAJ_P0080904 Eps8l1 protein_coding protein_coding MGP_CBAJ_T0080905.1 MGP_CBAJ_G0031206.1 mouse_genomes_project 7 1622434 1623088 + Eps8l1 protein_coding processed_transcript MGP_CBAJ_T0080906.1 MGP_CBAJ_G0031206.1 mouse_genomes_project 7 1625879 1626422 + Eps8l1 protein_coding processed_transcript MGP_CBAJ_T0080907.1 MGP_CBAJ_G0031206.1 mouse_genomes_project 7 1626117 1627696 + MGP_CBAJ_P0080907 Eps8l1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083444.1 MGP_CBAJ_G0031915.1 mouse_genomes_project 7 49890937 49899212 + MGP_CBAJ_P0083444 Fam83e protein_coding protein_coding MGP_CBAJ_T0083445.1 MGP_CBAJ_G0031915.1 mouse_genomes_project 7 49890945 49894585 + Fam83e protein_coding retained_intron MGP_CBAJ_T0083447.1 MGP_CBAJ_G0031915.1 mouse_genomes_project 7 49895584 49899209 + Fam83e protein_coding processed_transcript MGP_CBAJ_T0084324.1 MGP_CBAJ_G0032104.1 mouse_genomes_project 7 90032191 90036802 + MGP_CBAJ_P0084324 protein_coding protein_coding MGP_CBAJ_T0080931.1 MGP_CBAJ_G0031209.1 mouse_genomes_project 7 1667135 1668595 - Tnni3 protein_coding retained_intron MGP_CBAJ_T0080932.1 MGP_CBAJ_G0031209.1 mouse_genomes_project 7 1667135 1671170 - MGP_CBAJ_P0080932 Tnni3 protein_coding protein_coding MGP_CBAJ_T0080933.1 MGP_CBAJ_G0031209.1 mouse_genomes_project 7 1667138 1669210 - Tnni3 protein_coding retained_intron MGP_CBAJ_T0080934.1 MGP_CBAJ_G0031209.1 mouse_genomes_project 7 1669080 1671436 - MGP_CBAJ_P0080934 Tnni3 protein_coding protein_coding MGP_CBAJ_T0080935.1 MGP_CBAJ_G0031209.1 mouse_genomes_project 7 1669119 1672871 - MGP_CBAJ_P0080935 Tnni3 protein_coding protein_coding MGP_CBAJ_T0080936.1 MGP_CBAJ_G0031209.1 mouse_genomes_project 7 1669684 1671084 - Tnni3 protein_coding retained_intron MGP_CBAJ_T0080937.1 MGP_CBAJ_G0031209.1 mouse_genomes_project 7 1669982 1671134 - Tnni3 protein_coding retained_intron MGP_CBAJ_T0084421.1 MGP_CBAJ_G0032142.1 mouse_genomes_project 7 95209618 95210658 - MGP_CBAJ_P0084421 Olfr303 protein_coding protein_coding MGP_CBAJ_T0085055.1 MGP_CBAJ_G0032350.1 mouse_genomes_project 7 115036100 115037024 - MGP_CBAJ_P0085055 Olfr64 protein_coding protein_coding MGP_CBAJ_T0085052.1 MGP_CBAJ_G0032347.1 mouse_genomes_project 7 114968961 114970496 - MGP_CBAJ_P0085052 Hbb-bh1 protein_coding protein_coding MGP_CBAJ_T0084694.1 MGP_CBAJ_G0032219.1 mouse_genomes_project 7 109899866 109979438 + MGP_CBAJ_P0084694 Arrb1 protein_coding protein_coding MGP_CBAJ_T0084695.1 MGP_CBAJ_G0032219.1 mouse_genomes_project 7 109899866 109979438 + MGP_CBAJ_P0084695 Arrb1 protein_coding protein_coding MGP_CBAJ_T0084696.1 MGP_CBAJ_G0032219.1 mouse_genomes_project 7 109900062 109976227 + MGP_CBAJ_P0084696 Arrb1 protein_coding protein_coding MGP_CBAJ_T0084697.1 MGP_CBAJ_G0032219.1 mouse_genomes_project 7 109900104 109961712 + MGP_CBAJ_P0084697 Arrb1 protein_coding protein_coding MGP_CBAJ_T0084698.1 MGP_CBAJ_G0032219.1 mouse_genomes_project 7 109904079 109960907 + MGP_CBAJ_P0084698 Arrb1 protein_coding protein_coding MGP_CBAJ_T0084699.1 MGP_CBAJ_G0032219.1 mouse_genomes_project 7 109941176 109960899 + Arrb1 protein_coding processed_transcript MGP_CBAJ_T0084700.1 MGP_CBAJ_G0032219.1 mouse_genomes_project 7 109967338 109973795 + Arrb1 protein_coding retained_intron MGP_CBAJ_T0084701.1 MGP_CBAJ_G0032219.1 mouse_genomes_project 7 109967359 109973809 + Arrb1 protein_coding retained_intron MGP_CBAJ_T0084702.1 MGP_CBAJ_G0032219.1 mouse_genomes_project 7 109967366 109972448 + Arrb1 protein_coding retained_intron MGP_CBAJ_T0084703.1 MGP_CBAJ_G0032219.1 mouse_genomes_project 7 109967368 109972728 + MGP_CBAJ_P0084703 Arrb1 protein_coding protein_coding MGP_CBAJ_T0082144.1 MGP_CBAJ_G0031599.1 mouse_genomes_project 7 28914684 28976150 + MGP_CBAJ_P0082144 Fcgbp protein_coding protein_coding MGP_CBAJ_T0082145.1 MGP_CBAJ_G0031599.1 mouse_genomes_project 7 28914684 28976148 + MGP_CBAJ_P0082145 Fcgbp protein_coding protein_coding MGP_CBAJ_T0082146.1 MGP_CBAJ_G0031599.1 mouse_genomes_project 7 28915026 28938463 + Fcgbp protein_coding retained_intron MGP_CBAJ_T0082148.1 MGP_CBAJ_G0031599.1 mouse_genomes_project 7 28952585 28976148 + Fcgbp protein_coding retained_intron MGP_CBAJ_T0100741.1 MGP_CBAJ_G0038996.1 mouse_genomes_project 7 65511113 65511180 - Snord64 snoRNA snoRNA MGP_CBAJ_T0100739.1 MGP_CBAJ_G0038994.1 mouse_genomes_project 7 65368077 65368156 - snoRNA snoRNA MGP_CBAJ_T0010817.1 MGP_CBAJ_G0008955.1 mouse_genomes_project 7 159930098 159930192 + Mir6404 miRNA miRNA MGP_CBAJ_T0086222.1 MGP_CBAJ_G0032685.1 mouse_genomes_project 7 141021450 141023770 - MGP_CBAJ_P0086222 protein_coding protein_coding MGP_CBAJ_T0086225.1 MGP_CBAJ_G0032685.1 mouse_genomes_project 7 141021592 141023738 - MGP_CBAJ_P0086225 protein_coding protein_coding MGP_CBAJ_T0086226.1 MGP_CBAJ_G0032685.1 mouse_genomes_project 7 141021794 141023098 - MGP_CBAJ_P0086226 protein_coding protein_coding MGP_CBAJ_T0086227.1 MGP_CBAJ_G0032685.1 mouse_genomes_project 7 141021823 141023735 - MGP_CBAJ_P0086227 protein_coding protein_coding MGP_CBAJ_T0083831.1 MGP_CBAJ_G0032013.1 mouse_genomes_project 7 71901688 71942698 + Tarsl2 protein_coding retained_intron MGP_CBAJ_T0083832.1 MGP_CBAJ_G0032013.1 mouse_genomes_project 7 71901688 71950975 + MGP_CBAJ_P0083832 Tarsl2 protein_coding protein_coding MGP_CBAJ_T0083833.1 MGP_CBAJ_G0032013.1 mouse_genomes_project 7 71915800 71918511 + Tarsl2 protein_coding retained_intron MGP_CBAJ_T0083834.1 MGP_CBAJ_G0032013.1 mouse_genomes_project 7 71936945 71948966 + Tarsl2 protein_coding processed_transcript MGP_CBAJ_T0084713.1 MGP_CBAJ_G0032224.1 mouse_genomes_project 7 110239457 110254274 - MGP_CBAJ_P0084713 Neu3 protein_coding protein_coding MGP_CBAJ_T0087473.1 MGP_CBAJ_G0032966.1 mouse_genomes_project 7 161380617 161411964 - MGP_CBAJ_P0087473 Tpcn2 protein_coding protein_coding MGP_CBAJ_T0101184.1 MGP_CBAJ_G0039352.1 mouse_genomes_project 7 142619971 142654065 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101185.1 MGP_CBAJ_G0039352.1 mouse_genomes_project 7 142652831 142653026 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0086498.1 MGP_CBAJ_G0032739.1 mouse_genomes_project 7 142210619 142214779 - MGP_CBAJ_P0086498 Pycard protein_coding protein_coding MGP_CBAJ_T0086499.1 MGP_CBAJ_G0032739.1 mouse_genomes_project 7 142212551 142214439 - MGP_CBAJ_P0086499 Pycard protein_coding protein_coding MGP_CBAJ_T0081437.1 MGP_CBAJ_G0031398.1 mouse_genomes_project 7 17478586 17507256 + MGP_CBAJ_P0081437 Mill1 protein_coding protein_coding MGP_CBAJ_T0086238.1 MGP_CBAJ_G0032688.1 mouse_genomes_project 7 141028542 141032837 - MGP_CBAJ_P0086238 Maz protein_coding unknown_likely_coding MGP_CBAJ_T0086239.1 MGP_CBAJ_G0032688.1 mouse_genomes_project 7 141028551 141032870 - MGP_CBAJ_P0086239 Maz protein_coding protein_coding MGP_CBAJ_T0086240.1 MGP_CBAJ_G0032688.1 mouse_genomes_project 7 141028552 141032732 - MGP_CBAJ_P0086240 Maz protein_coding protein_coding MGP_CBAJ_T0086241.1 MGP_CBAJ_G0032688.1 mouse_genomes_project 7 141029307 141032990 - MGP_CBAJ_P0086241 Maz protein_coding protein_coding MGP_CBAJ_T0086242.1 MGP_CBAJ_G0032688.1 mouse_genomes_project 7 141029467 141031550 - Maz protein_coding retained_intron MGP_CBAJ_T0084711.1 MGP_CBAJ_G0032222.1 mouse_genomes_project 7 110133746 110136541 + MGP_CBAJ_P0084711 protein_coding protein_coding MGP_CBAJ_T0018071.1 MGP_CBAJ_G0015396.1 mouse_genomes_project 7 4097790 4108402 - Gm44015 processed_transcript lincRNA MGP_CBAJ_T0081193.1 MGP_CBAJ_G0031318.1 mouse_genomes_project 7 11155786 11160688 - MGP_CBAJ_P0081193 Zbtb45 protein_coding protein_coding MGP_CBAJ_T0081194.1 MGP_CBAJ_G0031318.1 mouse_genomes_project 7 11156536 11160666 - MGP_CBAJ_P0081194 Zbtb45 protein_coding protein_coding MGP_CBAJ_T0085418.1 MGP_CBAJ_G0032529.1 mouse_genomes_project 7 122731759 122733921 + MGP_CBAJ_P0085418 Adm protein_coding protein_coding MGP_CBAJ_T0085419.1 MGP_CBAJ_G0032529.1 mouse_genomes_project 7 122731767 122733920 + MGP_CBAJ_P0085419 Adm protein_coding protein_coding MGP_CBAJ_T0085420.1 MGP_CBAJ_G0032529.1 mouse_genomes_project 7 122732126 122732650 + Adm protein_coding retained_intron MGP_CBAJ_T0084505.1 MGP_CBAJ_G0032176.1 mouse_genomes_project 7 99735322 99743114 - MGP_CBAJ_P0084505 Tmem126b protein_coding protein_coding MGP_CBAJ_T0084506.1 MGP_CBAJ_G0032176.1 mouse_genomes_project 7 99737067 99743108 - Tmem126b protein_coding retained_intron MGP_CBAJ_T0101176.1 MGP_CBAJ_G0039348.1 mouse_genomes_project 7 29433633 29438797 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101177.1 MGP_CBAJ_G0039348.1 mouse_genomes_project 7 29438024 29438579 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0102054.1 MGP_CBAJ_G0040084.1 mouse_genomes_project 7 8344096 8344975 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085702.1 MGP_CBAJ_G0032588.1 mouse_genomes_project 7 132882731 132908526 + MGP_CBAJ_P0085702 Acsm3 protein_coding protein_coding MGP_CBAJ_T0085703.1 MGP_CBAJ_G0032588.1 mouse_genomes_project 7 132882731 132908530 + MGP_CBAJ_P0085703 Acsm3 protein_coding protein_coding MGP_CBAJ_T0085704.1 MGP_CBAJ_G0032588.1 mouse_genomes_project 7 132882732 132908528 + MGP_CBAJ_P0085704 Acsm3 protein_coding protein_coding MGP_CBAJ_T0085705.1 MGP_CBAJ_G0032588.1 mouse_genomes_project 7 132882732 132911150 + MGP_CBAJ_P0085705 Acsm3 protein_coding protein_coding MGP_CBAJ_T0085706.1 MGP_CBAJ_G0032588.1 mouse_genomes_project 7 132890023 132908533 + MGP_CBAJ_P0085706 Acsm3 protein_coding protein_coding MGP_CBAJ_T0085709.1 MGP_CBAJ_G0032588.1 mouse_genomes_project 7 132898260 132902895 + Acsm3 protein_coding retained_intron MGP_CBAJ_T0085710.1 MGP_CBAJ_G0032588.1 mouse_genomes_project 7 132900771 132904656 + Acsm3 protein_coding retained_intron MGP_CBAJ_T0085711.1 MGP_CBAJ_G0032588.1 mouse_genomes_project 7 132904378 132904697 + Acsm3 protein_coding retained_intron MGP_CBAJ_T0008765.1 MGP_CBAJ_G0007069.1 mouse_genomes_project 7 47232267 47232625 + Gm44818 lincRNA lincRNA MGP_CBAJ_T0015596.1 MGP_CBAJ_G0013708.1 mouse_genomes_project 7 62405863 62406466 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010712.1 MGP_CBAJ_G0008850.1 mouse_genomes_project 7 4814938 4814994 + Mir5620 miRNA miRNA MGP_CBAJ_T0008814.1 MGP_CBAJ_G0007108.1 mouse_genomes_project 7 80355827 80398627 - Gm30075 lincRNA lincRNA MGP_CBAJ_T0083773.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70303786 70434802 + MGP_CBAJ_P0083773 Trpm1 protein_coding protein_coding MGP_CBAJ_T0083774.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70303796 70392288 + MGP_CBAJ_P0083774 Trpm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083775.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70303796 70434159 + MGP_CBAJ_P0083775 Trpm1 protein_coding protein_coding MGP_CBAJ_T0083776.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70303879 70434159 + MGP_CBAJ_P0083776 Trpm1 protein_coding protein_coding MGP_CBAJ_T0083777.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70340687 70371451 + Trpm1 protein_coding retained_intron MGP_CBAJ_T0083778.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70340765 70355193 + Trpm1 protein_coding processed_transcript MGP_CBAJ_T0083779.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70340765 70390385 + MGP_CBAJ_P0083779 Trpm1 protein_coding protein_coding MGP_CBAJ_T0083780.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70340856 70390313 + Trpm1 protein_coding retained_intron MGP_CBAJ_T0083781.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70340858 70434784 + MGP_CBAJ_P0083781 Trpm1 protein_coding protein_coding MGP_CBAJ_T0083782.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70340859 70361096 + MGP_CBAJ_P0083782 Trpm1 protein_coding protein_coding MGP_CBAJ_T0083783.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70340861 70384284 + MGP_CBAJ_P0083783 Trpm1 protein_coding protein_coding MGP_CBAJ_T0083784.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70340890 70384284 + MGP_CBAJ_P0083784 Trpm1 protein_coding protein_coding MGP_CBAJ_T0083785.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70340907 70361069 + MGP_CBAJ_P0083785 Trpm1 protein_coding protein_coding MGP_CBAJ_T0083786.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70355171 70361212 + MGP_CBAJ_P0083786 Trpm1 protein_coding protein_coding MGP_CBAJ_T0083787.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70362188 70370914 + Trpm1 protein_coding processed_transcript MGP_CBAJ_T0083788.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70362188 70368352 + MGP_CBAJ_P0083788 Trpm1 protein_coding protein_coding MGP_CBAJ_T0083789.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70370048 70385905 + Trpm1 protein_coding retained_intron MGP_CBAJ_T0083790.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70370933 70389309 + MGP_CBAJ_P0083790 Trpm1 protein_coding protein_coding MGP_CBAJ_T0083791.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70385423 70388772 + Trpm1 protein_coding retained_intron MGP_CBAJ_T0083792.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70392129 70408166 + Trpm1 protein_coding retained_intron MGP_CBAJ_T0083793.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70392496 70396808 + Trpm1 protein_coding processed_transcript MGP_CBAJ_T0083794.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70410382 70433167 + Trpm1 protein_coding retained_intron MGP_CBAJ_T0083795.1 MGP_CBAJ_G0032004.1 mouse_genomes_project 7 70410595 70433047 + MGP_CBAJ_P0083795 Trpm1 protein_coding protein_coding MGP_CBAJ_T0010703.1 MGP_CBAJ_G0008841.1 mouse_genomes_project 7 176528 176605 + Mir291b miRNA miRNA MGP_CBAJ_T0005053.1 MGP_CBAJ_G0004307.1 mouse_genomes_project 7 409869 422688 - Gm44151 antisense antisense MGP_CBAJ_T0084317.1 MGP_CBAJ_G0032100.1 mouse_genomes_project 7 89733830 89737836 - MGP_CBAJ_P0084317 BC048679 protein_coding protein_coding MGP_CBAJ_T0084318.1 MGP_CBAJ_G0032100.1 mouse_genomes_project 7 89733830 89737836 - MGP_CBAJ_P0084318 BC048679 protein_coding protein_coding MGP_CBAJ_T0010767.1 MGP_CBAJ_G0008905.1 mouse_genomes_project 7 67858205 67858285 - Mir344-2 miRNA miRNA MGP_CBAJ_T0015683.1 MGP_CBAJ_G0013795.1 mouse_genomes_project 7 138997256 138997694 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0084743.1 MGP_CBAJ_G0032235.1 mouse_genomes_project 7 110846363 110956551 + MGP_CBAJ_P0084743 C2cd3 protein_coding protein_coding MGP_CBAJ_T0084744.1 MGP_CBAJ_G0032235.1 mouse_genomes_project 7 110846363 110955857 + MGP_CBAJ_P0084744 C2cd3 protein_coding protein_coding MGP_CBAJ_T0084745.1 MGP_CBAJ_G0032235.1 mouse_genomes_project 7 110846376 110908446 + MGP_CBAJ_P0084745 C2cd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084746.1 MGP_CBAJ_G0032235.1 mouse_genomes_project 7 110846411 110892332 + C2cd3 protein_coding retained_intron MGP_CBAJ_T0084747.1 MGP_CBAJ_G0032235.1 mouse_genomes_project 7 110877415 110941325 + MGP_CBAJ_P0084747 C2cd3 protein_coding protein_coding MGP_CBAJ_T0084748.1 MGP_CBAJ_G0032235.1 mouse_genomes_project 7 110905588 110908154 + C2cd3 protein_coding retained_intron MGP_CBAJ_T0084749.1 MGP_CBAJ_G0032235.1 mouse_genomes_project 7 110914226 110917425 + MGP_CBAJ_P0084749 C2cd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084750.1 MGP_CBAJ_G0032235.1 mouse_genomes_project 7 110915258 110956553 + MGP_CBAJ_P0084750 C2cd3 protein_coding protein_coding MGP_CBAJ_T0084751.1 MGP_CBAJ_G0032235.1 mouse_genomes_project 7 110928493 110929892 + C2cd3 protein_coding retained_intron MGP_CBAJ_T0084752.1 MGP_CBAJ_G0032235.1 mouse_genomes_project 7 110935631 110941714 + MGP_CBAJ_P0084752 C2cd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084753.1 MGP_CBAJ_G0032235.1 mouse_genomes_project 7 110938225 110941673 + C2cd3 protein_coding retained_intron MGP_CBAJ_T0084754.1 MGP_CBAJ_G0032235.1 mouse_genomes_project 7 110950977 110956553 + MGP_CBAJ_P0084754 C2cd3 protein_coding protein_coding MGP_CBAJ_T0081290.1 MGP_CBAJ_G0031356.1 mouse_genomes_project 7 14809399 14839765 - MGP_CBAJ_P0081290 Gltscr1 protein_coding protein_coding MGP_CBAJ_T0008803.1 MGP_CBAJ_G0007098.1 mouse_genomes_project 7 78864728 78910774 + lincRNA lincRNA MGP_CBAJ_T0002274.1 MGP_CBAJ_G0002188.1 mouse_genomes_project 7 141972810 141975511 - TEC TEC MGP_CBAJ_T0015664.1 MGP_CBAJ_G0013776.1 mouse_genomes_project 7 115982145 115983198 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0102128.1 MGP_CBAJ_G0040157.1 mouse_genomes_project 7 44914992 44915232 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0084704.1 MGP_CBAJ_G0032220.1 mouse_genomes_project 7 110007027 110010044 - MGP_CBAJ_P0084704 Tpbgl protein_coding protein_coding MGP_CBAJ_T0082134.1 MGP_CBAJ_G0031595.1 mouse_genomes_project 7 28680257 28710551 + MGP_CBAJ_P0082134 Zfp607a protein_coding protein_coding MGP_CBAJ_T0085140.1 MGP_CBAJ_G0032407.1 mouse_genomes_project 7 116377314 116378266 + MGP_CBAJ_P0085140 Olfr679 protein_coding protein_coding MGP_CBAJ_T0084869.1 MGP_CBAJ_G0032256.1 mouse_genomes_project 7 112565338 112570619 - MGP_CBAJ_P0084869 Folr2 protein_coding protein_coding MGP_CBAJ_T0015630.1 MGP_CBAJ_G0013742.1 mouse_genomes_project 7 95100040 95100290 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0086806.1 MGP_CBAJ_G0032801.1 mouse_genomes_project 7 150310545 150314765 + MGP_CBAJ_P0086806 Nps protein_coding protein_coding MGP_CBAJ_T0081003.1 MGP_CBAJ_G0031225.1 mouse_genomes_project 7 1992896 2010129 - MGP_CBAJ_P0081003 Ube2s protein_coding nonsense_mediated_decay MGP_CBAJ_T0081004.1 MGP_CBAJ_G0031225.1 mouse_genomes_project 7 2004799 2008897 - Ube2s protein_coding retained_intron MGP_CBAJ_T0081005.1 MGP_CBAJ_G0031225.1 mouse_genomes_project 7 2005788 2010368 - MGP_CBAJ_P0081005 Ube2s protein_coding protein_coding MGP_CBAJ_T0081006.1 MGP_CBAJ_G0031225.1 mouse_genomes_project 7 2006254 2009902 - MGP_CBAJ_P0081006 Ube2s protein_coding protein_coding MGP_CBAJ_T0081007.1 MGP_CBAJ_G0031225.1 mouse_genomes_project 7 2008222 2009684 - MGP_CBAJ_P0081007 Ube2s protein_coding protein_coding MGP_CBAJ_T0100768.1 MGP_CBAJ_G0039023.1 mouse_genomes_project 7 131868587 131868701 + Gm26147 snoRNA snoRNA MGP_CBAJ_T0085118.1 MGP_CBAJ_G0032386.1 mouse_genomes_project 7 115727246 115728173 - MGP_CBAJ_P0085118 Olfr655 protein_coding protein_coding MGP_CBAJ_T0085697.1 MGP_CBAJ_G0032585.1 mouse_genomes_project 7 132689859 132725015 + MGP_CBAJ_P0085697 Acsm1 protein_coding protein_coding MGP_CBAJ_T0085698.1 MGP_CBAJ_G0032585.1 mouse_genomes_project 7 132700595 132759421 + MGP_CBAJ_P0085698 Acsm1 protein_coding protein_coding MGP_CBAJ_T0085699.1 MGP_CBAJ_G0032585.1 mouse_genomes_project 7 132700627 132759141 + MGP_CBAJ_P0085699 Acsm1 protein_coding protein_coding MGP_CBAJ_T0082612.1 MGP_CBAJ_G0031714.1 mouse_genomes_project 7 32233923 32235791 + Krtdap protein_coding retained_intron MGP_CBAJ_T0082613.1 MGP_CBAJ_G0031714.1 mouse_genomes_project 7 32233932 32237095 + MGP_CBAJ_P0082613 Krtdap protein_coding protein_coding MGP_CBAJ_T0082614.1 MGP_CBAJ_G0031714.1 mouse_genomes_project 7 32233932 32237111 + MGP_CBAJ_P0082614 Krtdap protein_coding protein_coding MGP_CBAJ_T0082615.1 MGP_CBAJ_G0031714.1 mouse_genomes_project 7 32233932 32237117 + MGP_CBAJ_P0082615 Krtdap protein_coding protein_coding MGP_CBAJ_T0082616.1 MGP_CBAJ_G0031714.1 mouse_genomes_project 7 32233932 32237125 + MGP_CBAJ_P0082616 Krtdap protein_coding protein_coding MGP_CBAJ_T0082617.1 MGP_CBAJ_G0031714.1 mouse_genomes_project 7 32233932 32237113 + MGP_CBAJ_P0082617 Krtdap protein_coding protein_coding MGP_CBAJ_T0082618.1 MGP_CBAJ_G0031714.1 mouse_genomes_project 7 32235829 32237113 + Krtdap protein_coding retained_intron MGP_CBAJ_T0082619.1 MGP_CBAJ_G0031714.1 mouse_genomes_project 7 32235881 32237111 + Krtdap protein_coding retained_intron MGP_CBAJ_T0082620.1 MGP_CBAJ_G0031714.1 mouse_genomes_project 7 32236514 32237113 + Krtdap protein_coding retained_intron MGP_CBAJ_T0084899.1 MGP_CBAJ_G0032259.1 mouse_genomes_project 7 112636254 112641667 - MGP_CBAJ_P0084899 Tomt protein_coding protein_coding MGP_CBAJ_T0084901.1 MGP_CBAJ_G0032259.1 mouse_genomes_project 7 112637699 112644250 - MGP_CBAJ_P0084901 Tomt protein_coding protein_coding MGP_CBAJ_T0002271.1 MGP_CBAJ_G0002185.1 mouse_genomes_project 7 141332984 141335036 + TEC TEC MGP_CBAJ_T0098216.1 MGP_CBAJ_G0036489.1 mouse_genomes_project 7 89769333 89769460 + Mir1839 scaRNA scaRNA MGP_CBAJ_T0081543.1 MGP_CBAJ_G0031434.1 mouse_genomes_project 7 18810431 18824295 + MGP_CBAJ_P0081543 Rtn2 protein_coding protein_coding MGP_CBAJ_T0081544.1 MGP_CBAJ_G0031434.1 mouse_genomes_project 7 18819451 18824290 + MGP_CBAJ_P0081544 Rtn2 protein_coding protein_coding MGP_CBAJ_T0002193.1 MGP_CBAJ_G0002108.1 mouse_genomes_project 7 60280485 60281257 - TEC TEC MGP_CBAJ_T0102206.1 MGP_CBAJ_G0040235.1 mouse_genomes_project 7 114957733 114958821 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081532.1 MGP_CBAJ_G0031431.1 mouse_genomes_project 7 18747455 18770311 + MGP_CBAJ_P0081532 Opa3 protein_coding protein_coding MGP_CBAJ_T0081533.1 MGP_CBAJ_G0031431.1 mouse_genomes_project 7 18747504 18748231 + Opa3 protein_coding retained_intron MGP_CBAJ_T0081534.1 MGP_CBAJ_G0031431.1 mouse_genomes_project 7 18747504 18780239 + MGP_CBAJ_P0081534 Opa3 protein_coding protein_coding MGP_CBAJ_T0002177.1 MGP_CBAJ_G0002092.1 mouse_genomes_project 7 40045667 40046516 - TEC TEC MGP_CBAJ_T0015696.1 MGP_CBAJ_G0013808.1 mouse_genomes_project 7 142383373 142388219 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0085523.1 MGP_CBAJ_G0032551.1 mouse_genomes_project 7 126718065 126760521 - MGP_CBAJ_P0085523 Copb1 protein_coding protein_coding MGP_CBAJ_T0102183.1 MGP_CBAJ_G0040212.1 mouse_genomes_project 7 94543248 94543967 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0083268.1 MGP_CBAJ_G0031868.1 mouse_genomes_project 7 49119369 49135447 + MGP_CBAJ_P0083268 Nosip protein_coding protein_coding MGP_CBAJ_T0083269.1 MGP_CBAJ_G0031868.1 mouse_genomes_project 7 49119369 49135447 + MGP_CBAJ_P0083269 Nosip protein_coding protein_coding MGP_CBAJ_T0099520.1 MGP_CBAJ_G0037775.1 mouse_genomes_project 7 135748364 135748471 + Gm23614 snRNA snRNA MGP_CBAJ_T0015616.1 MGP_CBAJ_G0013728.1 mouse_genomes_project 7 82799715 82799994 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0081573.1 MGP_CBAJ_G0031440.1 mouse_genomes_project 7 18927485 18936675 - MGP_CBAJ_P0081573 Klc3 protein_coding protein_coding MGP_CBAJ_T0081574.1 MGP_CBAJ_G0031440.1 mouse_genomes_project 7 18927488 18932483 - MGP_CBAJ_P0081574 Klc3 protein_coding protein_coding MGP_CBAJ_T0081575.1 MGP_CBAJ_G0031440.1 mouse_genomes_project 7 18927488 18932440 - MGP_CBAJ_P0081575 Klc3 protein_coding protein_coding MGP_CBAJ_T0081576.1 MGP_CBAJ_G0031440.1 mouse_genomes_project 7 18927549 18929031 - Klc3 protein_coding retained_intron MGP_CBAJ_T0081577.1 MGP_CBAJ_G0031440.1 mouse_genomes_project 7 18927612 18932110 - MGP_CBAJ_P0081577 Klc3 protein_coding protein_coding MGP_CBAJ_T0081578.1 MGP_CBAJ_G0031440.1 mouse_genomes_project 7 18928402 18929625 - Klc3 protein_coding retained_intron MGP_CBAJ_T0081579.1 MGP_CBAJ_G0031440.1 mouse_genomes_project 7 18928791 18936394 - MGP_CBAJ_P0081579 Klc3 protein_coding unknown_likely_coding MGP_CBAJ_T0018109.1 MGP_CBAJ_G0015412.1 mouse_genomes_project 7 61385519 61398535 + A230056P14Rik processed_transcript processed_transcript MGP_CBAJ_T0018110.1 MGP_CBAJ_G0015412.1 mouse_genomes_project 7 61385519 61406350 + A230056P14Rik processed_transcript processed_transcript MGP_CBAJ_T0099495.1 MGP_CBAJ_G0037750.1 mouse_genomes_project 7 72424711 72424812 - Gm23042 snRNA snRNA MGP_CBAJ_T0081205.1 MGP_CBAJ_G0031321.1 mouse_genomes_project 7 11193363 11195787 - Ube2m protein_coding processed_transcript MGP_CBAJ_T0081206.1 MGP_CBAJ_G0031321.1 mouse_genomes_project 7 11193433 11195767 - MGP_CBAJ_P0081206 Ube2m protein_coding protein_coding MGP_CBAJ_T0081207.1 MGP_CBAJ_G0031321.1 mouse_genomes_project 7 11193727 11194788 - MGP_CBAJ_P0081207 Ube2m protein_coding protein_coding MGP_CBAJ_T0081208.1 MGP_CBAJ_G0031321.1 mouse_genomes_project 7 11193753 11195869 - MGP_CBAJ_P0081208 Ube2m protein_coding protein_coding MGP_CBAJ_T0081209.1 MGP_CBAJ_G0031321.1 mouse_genomes_project 7 11194115 11195886 - Ube2m protein_coding retained_intron MGP_CBAJ_T0081210.1 MGP_CBAJ_G0031321.1 mouse_genomes_project 7 11194581 11196411 - MGP_CBAJ_P0081210 Ube2m protein_coding protein_coding MGP_CBAJ_T0081211.1 MGP_CBAJ_G0031321.1 mouse_genomes_project 7 11194705 11195661 - Ube2m protein_coding processed_transcript MGP_CBAJ_T0015454.1 MGP_CBAJ_G0013566.1 mouse_genomes_project 7 1087519 1088351 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010801.1 MGP_CBAJ_G0008939.1 mouse_genomes_project 7 142586641 142586708 - Mir3103 miRNA miRNA MGP_CBAJ_T0085026.1 MGP_CBAJ_G0032321.1 mouse_genomes_project 7 114370530 114371475 - MGP_CBAJ_P0085026 protein_coding protein_coding MGP_CBAJ_T0082174.1 MGP_CBAJ_G0031610.1 mouse_genomes_project 7 29273906 29275827 + Rps16 protein_coding retained_intron MGP_CBAJ_T0082175.1 MGP_CBAJ_G0031610.1 mouse_genomes_project 7 29273947 29275906 + MGP_CBAJ_P0082175 Rps16 protein_coding protein_coding MGP_CBAJ_T0082176.1 MGP_CBAJ_G0031610.1 mouse_genomes_project 7 29274067 29275827 + Rps16 protein_coding processed_transcript MGP_CBAJ_T0087199.1 MGP_CBAJ_G0032907.1 mouse_genomes_project 7 157272797 157360144 + MGP_CBAJ_P0087199 Ap2a2 protein_coding protein_coding MGP_CBAJ_T0087200.1 MGP_CBAJ_G0032907.1 mouse_genomes_project 7 157272832 157327298 + Ap2a2 protein_coding retained_intron MGP_CBAJ_T0087201.1 MGP_CBAJ_G0032907.1 mouse_genomes_project 7 157273154 157322673 + MGP_CBAJ_P0087201 Ap2a2 protein_coding protein_coding MGP_CBAJ_T0082422.1 MGP_CBAJ_G0031673.1 mouse_genomes_project 7 31548298 31550156 + MGP_CBAJ_P0082422 Cox7a1 protein_coding protein_coding MGP_CBAJ_T0082082.1 MGP_CBAJ_G0031583.1 mouse_genomes_project 7 28183054 28186651 + MGP_CBAJ_P0082082 Sertad3 protein_coding protein_coding MGP_CBAJ_T0086299.1 MGP_CBAJ_G0032701.1 mouse_genomes_project 7 141331560 141333776 - MGP_CBAJ_P0086299 protein_coding protein_coding MGP_CBAJ_T0008720.1 MGP_CBAJ_G0007034.1 mouse_genomes_project 7 31139414 31145343 + Gm26554 lincRNA lincRNA MGP_CBAJ_T0084066.1 MGP_CBAJ_G0032057.1 mouse_genomes_project 7 87275516 87293129 - MGP_CBAJ_P0084066 Rlbp1 protein_coding protein_coding MGP_CBAJ_T0084067.1 MGP_CBAJ_G0032057.1 mouse_genomes_project 7 87275517 87293040 - MGP_CBAJ_P0084067 Rlbp1 protein_coding protein_coding MGP_CBAJ_T0084068.1 MGP_CBAJ_G0032057.1 mouse_genomes_project 7 87276191 87278359 - Rlbp1 protein_coding retained_intron MGP_CBAJ_T0084069.1 MGP_CBAJ_G0032057.1 mouse_genomes_project 7 87276567 87290185 - MGP_CBAJ_P0084069 Rlbp1 protein_coding protein_coding MGP_CBAJ_T0084070.1 MGP_CBAJ_G0032057.1 mouse_genomes_project 7 87278039 87292622 - MGP_CBAJ_P0084070 Rlbp1 protein_coding protein_coding MGP_CBAJ_T0084071.1 MGP_CBAJ_G0032057.1 mouse_genomes_project 7 87286071 87292686 - MGP_CBAJ_P0084071 Rlbp1 protein_coding protein_coding MGP_CBAJ_T0084072.1 MGP_CBAJ_G0032057.1 mouse_genomes_project 7 87287724 87292555 - MGP_CBAJ_P0084072 Rlbp1 protein_coding protein_coding MGP_CBAJ_T0084073.1 MGP_CBAJ_G0032057.1 mouse_genomes_project 7 87289935 87292993 - MGP_CBAJ_P0084073 Rlbp1 protein_coding protein_coding MGP_CBAJ_T0100774.1 MGP_CBAJ_G0039029.1 mouse_genomes_project 7 150142101 150142234 - Gm24581 snoRNA snoRNA MGP_CBAJ_T0086380.1 MGP_CBAJ_G0032718.1 mouse_genomes_project 7 141743683 141751086 - MGP_CBAJ_P0086380 Zfp629 protein_coding protein_coding MGP_CBAJ_T0086381.1 MGP_CBAJ_G0032718.1 mouse_genomes_project 7 141743683 141751925 - MGP_CBAJ_P0086381 Zfp629 protein_coding protein_coding MGP_CBAJ_T0086382.1 MGP_CBAJ_G0032718.1 mouse_genomes_project 7 141743683 141751868 - MGP_CBAJ_P0086382 Zfp629 protein_coding protein_coding MGP_CBAJ_T0086383.1 MGP_CBAJ_G0032718.1 mouse_genomes_project 7 141745107 141751520 - MGP_CBAJ_P0086383 Zfp629 protein_coding protein_coding MGP_CBAJ_T0086384.1 MGP_CBAJ_G0032718.1 mouse_genomes_project 7 141745239 141751911 - MGP_CBAJ_P0086384 Zfp629 protein_coding protein_coding MGP_CBAJ_T0086385.1 MGP_CBAJ_G0032718.1 mouse_genomes_project 7 141745408 141752450 - MGP_CBAJ_P0086385 Zfp629 protein_coding protein_coding MGP_CBAJ_T0086386.1 MGP_CBAJ_G0032718.1 mouse_genomes_project 7 141748556 141751013 - MGP_CBAJ_P0086386 Zfp629 protein_coding protein_coding MGP_CBAJ_T0086387.1 MGP_CBAJ_G0032718.1 mouse_genomes_project 7 141748636 141751853 - MGP_CBAJ_P0086387 Zfp629 protein_coding protein_coding MGP_CBAJ_T0086388.1 MGP_CBAJ_G0032718.1 mouse_genomes_project 7 141748703 141751018 - MGP_CBAJ_P0086388 Zfp629 protein_coding protein_coding MGP_CBAJ_T0010755.1 MGP_CBAJ_G0008893.1 mouse_genomes_project 7 67539982 67540051 - Mir344d-1 miRNA miRNA MGP_CBAJ_T0102085.1 MGP_CBAJ_G0040115.1 mouse_genomes_project 7 13061548 13062566 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085235.1 MGP_CBAJ_G0032432.1 mouse_genomes_project 7 117141829 117149414 - MGP_CBAJ_P0085235 Taf10 protein_coding protein_coding MGP_CBAJ_T0085243.1 MGP_CBAJ_G0032432.1 mouse_genomes_project 7 117145332 117149135 - Taf10 protein_coding retained_intron MGP_CBAJ_T0085244.1 MGP_CBAJ_G0032432.1 mouse_genomes_project 7 117145342 117146047 - Taf10 protein_coding retained_intron MGP_CBAJ_T0085245.1 MGP_CBAJ_G0032432.1 mouse_genomes_project 7 117145673 117149395 - Taf10 protein_coding retained_intron MGP_CBAJ_T0015508.1 MGP_CBAJ_G0013620.1 mouse_genomes_project 7 24248358 24248757 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010699.1 MGP_CBAJ_G0008837.1 mouse_genomes_project 7 175685 175743 - Mir290b miRNA miRNA MGP_CBAJ_T0081426.1 MGP_CBAJ_G0031390.1 mouse_genomes_project 7 16200829 16228483 + MGP_CBAJ_P0081426 Ceacam3 protein_coding protein_coding MGP_CBAJ_T0083149.1 MGP_CBAJ_G0031838.1 mouse_genomes_project 7 48500427 48508090 - MGP_CBAJ_P0083149 Spib protein_coding protein_coding MGP_CBAJ_T0083150.1 MGP_CBAJ_G0031838.1 mouse_genomes_project 7 48502397 48507293 - MGP_CBAJ_P0083150 Spib protein_coding protein_coding MGP_CBAJ_T0083151.1 MGP_CBAJ_G0031838.1 mouse_genomes_project 7 48502397 48508072 - MGP_CBAJ_P0083151 Spib protein_coding protein_coding MGP_CBAJ_T0083427.1 MGP_CBAJ_G0031911.1 mouse_genomes_project 7 49868800 49873593 + MGP_CBAJ_P0083427 Car11 protein_coding protein_coding MGP_CBAJ_T0015459.1 MGP_CBAJ_G0013571.1 mouse_genomes_project 7 1449133 1449498 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0084427.1 MGP_CBAJ_G0032148.1 mouse_genomes_project 7 95471805 95472776 - MGP_CBAJ_P0084427 Olfr294 protein_coding protein_coding MGP_CBAJ_T0082264.1 MGP_CBAJ_G0031633.1 mouse_genomes_project 7 29849358 29872700 + Ech1 protein_coding retained_intron MGP_CBAJ_T0082265.1 MGP_CBAJ_G0031633.1 mouse_genomes_project 7 29849358 29874815 + MGP_CBAJ_P0082265 Ech1 protein_coding protein_coding MGP_CBAJ_T0082266.1 MGP_CBAJ_G0031633.1 mouse_genomes_project 7 29849490 29850799 + Ech1 protein_coding retained_intron MGP_CBAJ_T0082267.1 MGP_CBAJ_G0031633.1 mouse_genomes_project 7 29850099 29873783 + Ech1 protein_coding processed_transcript MGP_CBAJ_T0082268.1 MGP_CBAJ_G0031633.1 mouse_genomes_project 7 29850345 29874815 + MGP_CBAJ_P0082268 Ech1 protein_coding protein_coding MGP_CBAJ_T0082270.1 MGP_CBAJ_G0031633.1 mouse_genomes_project 7 29872708 29874815 + Ech1 protein_coding retained_intron MGP_CBAJ_T0082271.1 MGP_CBAJ_G0031633.1 mouse_genomes_project 7 29873800 29874815 + Ech1 protein_coding retained_intron MGP_CBAJ_T0099476.1 MGP_CBAJ_G0037731.1 mouse_genomes_project 7 15573783 15573886 - Gm24708 snRNA snRNA MGP_CBAJ_T0081669.1 MGP_CBAJ_G0031471.1 mouse_genomes_project 7 23020811 23028533 + protein_coding processed_transcript MGP_CBAJ_T0086650.1 MGP_CBAJ_G0032765.1 mouse_genomes_project 7 145435012 145488459 + MGP_CBAJ_P0086650 Plekha1 protein_coding protein_coding MGP_CBAJ_T0086651.1 MGP_CBAJ_G0032765.1 mouse_genomes_project 7 145435141 145468008 + Plekha1 protein_coding retained_intron MGP_CBAJ_T0086652.1 MGP_CBAJ_G0032765.1 mouse_genomes_project 7 145435143 145449086 + Plekha1 protein_coding retained_intron MGP_CBAJ_T0086653.1 MGP_CBAJ_G0032765.1 mouse_genomes_project 7 145435154 145487215 + MGP_CBAJ_P0086653 Plekha1 protein_coding protein_coding MGP_CBAJ_T0086654.1 MGP_CBAJ_G0032765.1 mouse_genomes_project 7 145435159 145483233 + MGP_CBAJ_P0086654 Plekha1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086655.1 MGP_CBAJ_G0032765.1 mouse_genomes_project 7 145435166 145488449 + MGP_CBAJ_P0086655 Plekha1 protein_coding protein_coding MGP_CBAJ_T0086656.1 MGP_CBAJ_G0032765.1 mouse_genomes_project 7 145455617 145458786 + Plekha1 protein_coding retained_intron MGP_CBAJ_T0086657.1 MGP_CBAJ_G0032765.1 mouse_genomes_project 7 145470252 145478838 + Plekha1 protein_coding retained_intron MGP_CBAJ_T0086658.1 MGP_CBAJ_G0032765.1 mouse_genomes_project 7 145473794 145483088 + Plekha1 protein_coding processed_transcript MGP_CBAJ_T0086659.1 MGP_CBAJ_G0032765.1 mouse_genomes_project 7 145475656 145482312 + Plekha1 protein_coding retained_intron MGP_CBAJ_T0086660.1 MGP_CBAJ_G0032765.1 mouse_genomes_project 7 145478315 145486310 + MGP_CBAJ_P0086660 Plekha1 protein_coding protein_coding MGP_CBAJ_T0086661.1 MGP_CBAJ_G0032765.1 mouse_genomes_project 7 145478715 145486048 + Plekha1 protein_coding retained_intron MGP_CBAJ_T0087013.1 MGP_CBAJ_G0032872.1 mouse_genomes_project 7 156567007 156568448 - MGP_CBAJ_P0087013 Ifitm2 protein_coding protein_coding MGP_CBAJ_T0081126.1 MGP_CBAJ_G0031287.1 mouse_genomes_project 7 8445432 8446329 + MGP_CBAJ_P0081126 Vmn1r70 protein_coding protein_coding MGP_CBAJ_T0084528.1 MGP_CBAJ_G0032181.1 mouse_genomes_project 7 102316201 102425192 + MGP_CBAJ_P0084528 Rab30 protein_coding protein_coding MGP_CBAJ_T0084529.1 MGP_CBAJ_G0032181.1 mouse_genomes_project 7 102405913 102424722 + MGP_CBAJ_P0084529 Rab30 protein_coding protein_coding MGP_CBAJ_T0084530.1 MGP_CBAJ_G0032181.1 mouse_genomes_project 7 102405928 102424719 + MGP_CBAJ_P0084530 Rab30 protein_coding protein_coding MGP_CBAJ_T0002279.1 MGP_CBAJ_G0002193.1 mouse_genomes_project 7 143095291 143096287 - TEC TEC MGP_CBAJ_T0081247.1 MGP_CBAJ_G0031332.1 mouse_genomes_project 7 11639191 11666599 + MGP_CBAJ_P0081247 Bsph1 protein_coding protein_coding MGP_CBAJ_T0081248.1 MGP_CBAJ_G0031332.1 mouse_genomes_project 7 11639206 11666529 + MGP_CBAJ_P0081248 Bsph1 protein_coding protein_coding MGP_CBAJ_T0005175.1 MGP_CBAJ_G0004391.1 mouse_genomes_project 7 106840406 106850545 - Gm15413 antisense antisense MGP_CBAJ_T0102074.1 MGP_CBAJ_G0040104.1 mouse_genomes_project 7 11730445 11730881 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0086778.1 MGP_CBAJ_G0032795.1 mouse_genomes_project 7 148592565 148650147 - MGP_CBAJ_P0086778 Dhx32 protein_coding protein_coding MGP_CBAJ_T0086779.1 MGP_CBAJ_G0032795.1 mouse_genomes_project 7 148592569 148633652 - Dhx32 protein_coding processed_transcript MGP_CBAJ_T0086780.1 MGP_CBAJ_G0032795.1 mouse_genomes_project 7 148592733 148656123 - MGP_CBAJ_P0086780 Dhx32 protein_coding protein_coding MGP_CBAJ_T0086781.1 MGP_CBAJ_G0032795.1 mouse_genomes_project 7 148592851 148650078 - MGP_CBAJ_P0086781 Dhx32 protein_coding protein_coding MGP_CBAJ_T0086782.1 MGP_CBAJ_G0032795.1 mouse_genomes_project 7 148594667 148602384 - Dhx32 protein_coding processed_transcript MGP_CBAJ_T0086783.1 MGP_CBAJ_G0032795.1 mouse_genomes_project 7 148619601 148632855 - Dhx32 protein_coding processed_transcript MGP_CBAJ_T0086784.1 MGP_CBAJ_G0032795.1 mouse_genomes_project 7 148619901 148633212 - MGP_CBAJ_P0086784 Dhx32 protein_coding protein_coding MGP_CBAJ_T0086785.1 MGP_CBAJ_G0032795.1 mouse_genomes_project 7 148620046 148650031 - MGP_CBAJ_P0086785 Dhx32 protein_coding protein_coding MGP_CBAJ_T0086786.1 MGP_CBAJ_G0032795.1 mouse_genomes_project 7 148633060 148649853 - MGP_CBAJ_P0086786 Dhx32 protein_coding protein_coding MGP_CBAJ_T0083698.1 MGP_CBAJ_G0031983.1 mouse_genomes_project 7 61356824 61385465 - MGP_CBAJ_P0083698 Nipa2 protein_coding protein_coding MGP_CBAJ_T0083699.1 MGP_CBAJ_G0031983.1 mouse_genomes_project 7 61356824 61385428 - MGP_CBAJ_P0083699 Nipa2 protein_coding protein_coding MGP_CBAJ_T0083700.1 MGP_CBAJ_G0031983.1 mouse_genomes_project 7 61356824 61385234 - MGP_CBAJ_P0083700 Nipa2 protein_coding protein_coding MGP_CBAJ_T0083701.1 MGP_CBAJ_G0031983.1 mouse_genomes_project 7 61356824 61385439 - MGP_CBAJ_P0083701 Nipa2 protein_coding protein_coding MGP_CBAJ_T0083702.1 MGP_CBAJ_G0031983.1 mouse_genomes_project 7 61358786 61385381 - Nipa2 protein_coding processed_transcript MGP_CBAJ_T0083703.1 MGP_CBAJ_G0031983.1 mouse_genomes_project 7 61359051 61366152 - Nipa2 protein_coding retained_intron MGP_CBAJ_T0083704.1 MGP_CBAJ_G0031983.1 mouse_genomes_project 7 61363889 61385465 - MGP_CBAJ_P0083704 Nipa2 protein_coding protein_coding MGP_CBAJ_T0083705.1 MGP_CBAJ_G0031983.1 mouse_genomes_project 7 61363937 61385419 - MGP_CBAJ_P0083705 Nipa2 protein_coding protein_coding MGP_CBAJ_T0083706.1 MGP_CBAJ_G0031983.1 mouse_genomes_project 7 61370034 61385457 - Nipa2 protein_coding retained_intron MGP_CBAJ_T0083707.1 MGP_CBAJ_G0031983.1 mouse_genomes_project 7 61370211 61373029 - Nipa2 protein_coding retained_intron MGP_CBAJ_T0083708.1 MGP_CBAJ_G0031983.1 mouse_genomes_project 7 61372691 61385162 - MGP_CBAJ_P0083708 Nipa2 protein_coding protein_coding MGP_CBAJ_T0102094.1 MGP_CBAJ_G0040124.1 mouse_genomes_project 7 14437425 14437752 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0102197.1 MGP_CBAJ_G0040226.1 mouse_genomes_project 7 113860331 113861216 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0084914.1 MGP_CBAJ_G0032262.1 mouse_genomes_project 7 112723919 112769441 + MGP_CBAJ_P0084914 Numa1 protein_coding protein_coding MGP_CBAJ_T0084915.1 MGP_CBAJ_G0032262.1 mouse_genomes_project 7 112755626 112769437 + MGP_CBAJ_P0084915 Numa1 protein_coding protein_coding MGP_CBAJ_T0005146.1 MGP_CBAJ_G0004371.1 mouse_genomes_project 7 80746940 80763690 + Gm44686 antisense antisense MGP_CBAJ_T0081788.1 MGP_CBAJ_G0031515.1 mouse_genomes_project 7 24929192 24938935 + MGP_CBAJ_P0081788 Dmrtc2 protein_coding protein_coding MGP_CBAJ_T0086202.1 MGP_CBAJ_G0032680.1 mouse_genomes_project 7 140947166 140950720 - MGP_CBAJ_P0086202 protein_coding protein_coding MGP_CBAJ_T0086203.1 MGP_CBAJ_G0032680.1 mouse_genomes_project 7 140947549 140951143 - MGP_CBAJ_P0086203 protein_coding protein_coding MGP_CBAJ_T0086204.1 MGP_CBAJ_G0032680.1 mouse_genomes_project 7 140947568 140951142 - MGP_CBAJ_P0086204 protein_coding protein_coding MGP_CBAJ_T0080908.1 MGP_CBAJ_G0031207.1 mouse_genomes_project 7 1629971 1649815 - MGP_CBAJ_P0080908 Ppp1r12c protein_coding protein_coding MGP_CBAJ_T0080909.1 MGP_CBAJ_G0031207.1 mouse_genomes_project 7 1629971 1650655 - MGP_CBAJ_P0080909 Ppp1r12c protein_coding protein_coding MGP_CBAJ_T0080910.1 MGP_CBAJ_G0031207.1 mouse_genomes_project 7 1629974 1632484 - Ppp1r12c protein_coding retained_intron MGP_CBAJ_T0080911.1 MGP_CBAJ_G0031207.1 mouse_genomes_project 7 1630039 1631086 - Ppp1r12c protein_coding processed_transcript MGP_CBAJ_T0080912.1 MGP_CBAJ_G0031207.1 mouse_genomes_project 7 1632085 1632951 - Ppp1r12c protein_coding retained_intron MGP_CBAJ_T0080913.1 MGP_CBAJ_G0031207.1 mouse_genomes_project 7 1632391 1633766 - Ppp1r12c protein_coding retained_intron MGP_CBAJ_T0080914.1 MGP_CBAJ_G0031207.1 mouse_genomes_project 7 1632468 1634160 - Ppp1r12c protein_coding retained_intron MGP_CBAJ_T0080915.1 MGP_CBAJ_G0031207.1 mouse_genomes_project 7 1633657 1634384 - Ppp1r12c protein_coding retained_intron MGP_CBAJ_T0080916.1 MGP_CBAJ_G0031207.1 mouse_genomes_project 7 1634602 1635186 - Ppp1r12c protein_coding retained_intron MGP_CBAJ_T0080917.1 MGP_CBAJ_G0031207.1 mouse_genomes_project 7 1637624 1650639 - Ppp1r12c protein_coding retained_intron MGP_CBAJ_T0080918.1 MGP_CBAJ_G0031207.1 mouse_genomes_project 7 1638263 1650504 - MGP_CBAJ_P0080918 Ppp1r12c protein_coding nonsense_mediated_decay MGP_CBAJ_T0015641.1 MGP_CBAJ_G0013753.1 mouse_genomes_project 7 106456417 106456889 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0085501.1 MGP_CBAJ_G0032544.1 mouse_genomes_project 7 125594988 125714031 + MGP_CBAJ_P0085501 Arntl protein_coding protein_coding MGP_CBAJ_T0010793.1 MGP_CBAJ_G0008931.1 mouse_genomes_project 7 127761292 127761372 + Gm27684 miRNA miRNA MGP_CBAJ_T0005085.1 MGP_CBAJ_G0004327.1 mouse_genomes_project 7 25355847 25357410 + 4933430L12Rik antisense antisense MGP_CBAJ_T0082749.1 MGP_CBAJ_G0031741.1 mouse_genomes_project 7 36043166 36044565 + MGP_CBAJ_P0082749 Scgb1b27 protein_coding protein_coding MGP_CBAJ_T0082750.1 MGP_CBAJ_G0031741.1 mouse_genomes_project 7 36043250 36044133 + MGP_CBAJ_P0082750 Scgb1b27 protein_coding protein_coding MGP_CBAJ_T0002241.1 MGP_CBAJ_G0002155.1 mouse_genomes_project 7 87791226 87792505 - TEC TEC MGP_CBAJ_T0018163.1 MGP_CBAJ_G0015435.1 mouse_genomes_project 7 142468645 142479526 - 4931431B13Rik processed_transcript antisense MGP_CBAJ_T0018164.1 MGP_CBAJ_G0015435.1 mouse_genomes_project 7 142478275 142479522 - 4931431B13Rik processed_transcript retained_intron MGP_CBAJ_T0010704.1 MGP_CBAJ_G0008842.1 mouse_genomes_project 7 177307 177387 + Mir293 miRNA miRNA MGP_CBAJ_T0002172.1 MGP_CBAJ_G0002087.1 mouse_genomes_project 7 39165784 39169769 + TEC TEC MGP_CBAJ_T0086807.1 MGP_CBAJ_G0032802.1 mouse_genomes_project 7 150448380 150451583 + MGP_CBAJ_P0086807 protein_coding protein_coding MGP_CBAJ_T0099529.1 MGP_CBAJ_G0037784.1 mouse_genomes_project 7 144504398 144504508 + Gm23847 snRNA snRNA MGP_CBAJ_T0085113.1 MGP_CBAJ_G0032382.1 mouse_genomes_project 7 115674176 115675118 + MGP_CBAJ_P0085113 Olfr651 protein_coding protein_coding MGP_CBAJ_T0015529.1 MGP_CBAJ_G0013641.1 mouse_genomes_project 7 31141969 31142385 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002239.1 MGP_CBAJ_G0002153.1 mouse_genomes_project 7 87438338 87440218 + TEC TEC MGP_CBAJ_T0083643.1 MGP_CBAJ_G0031971.1 mouse_genomes_project 7 54764909 55368851 + MGP_CBAJ_P0083643 Nell1 protein_coding protein_coding MGP_CBAJ_T0083644.1 MGP_CBAJ_G0031971.1 mouse_genomes_project 7 54764909 55686844 + MGP_CBAJ_P0083644 Nell1 protein_coding protein_coding MGP_CBAJ_T0083645.1 MGP_CBAJ_G0031971.1 mouse_genomes_project 7 54765114 55084048 + Nell1 protein_coding retained_intron MGP_CBAJ_T0083646.1 MGP_CBAJ_G0031971.1 mouse_genomes_project 7 54765379 55684944 + MGP_CBAJ_P0083646 Nell1 protein_coding protein_coding MGP_CBAJ_T0083647.1 MGP_CBAJ_G0031971.1 mouse_genomes_project 7 54907049 55037516 + Nell1 protein_coding processed_transcript MGP_CBAJ_T0086692.1 MGP_CBAJ_G0032776.1 mouse_genomes_project 7 146240416 146242475 + MGP_CBAJ_P0086692 Hmx3 protein_coding protein_coding MGP_CBAJ_T0085128.1 MGP_CBAJ_G0032396.1 mouse_genomes_project 7 115927651 115930348 - MGP_CBAJ_P0085128 protein_coding protein_coding MGP_CBAJ_T0081090.1 MGP_CBAJ_G0031263.1 mouse_genomes_project 7 3796959 3835420 + MGP_CBAJ_P0081090 Smim17 protein_coding protein_coding MGP_CBAJ_T0081091.1 MGP_CBAJ_G0031263.1 mouse_genomes_project 7 3796992 3808805 + Smim17 protein_coding processed_transcript MGP_CBAJ_T0081093.1 MGP_CBAJ_G0031263.1 mouse_genomes_project 7 3816462 3838063 + MGP_CBAJ_P0081093 Smim17 protein_coding protein_coding MGP_CBAJ_T0010748.1 MGP_CBAJ_G0008886.1 mouse_genomes_project 7 52230280 52230390 + Gm22427 miRNA miRNA MGP_CBAJ_T0081288.1 MGP_CBAJ_G0031355.1 mouse_genomes_project 7 14785053 14805718 - MGP_CBAJ_P0081288 Ehd2 protein_coding protein_coding MGP_CBAJ_T0081289.1 MGP_CBAJ_G0031355.1 mouse_genomes_project 7 14795763 14805626 - MGP_CBAJ_P0081289 Ehd2 protein_coding protein_coding MGP_CBAJ_T0085085.1 MGP_CBAJ_G0032373.1 mouse_genomes_project 7 115448983 115468604 - protein_coding processed_transcript MGP_CBAJ_T0085086.1 MGP_CBAJ_G0032373.1 mouse_genomes_project 7 115448986 115480004 - MGP_CBAJ_P0085086 protein_coding protein_coding MGP_CBAJ_T0085087.1 MGP_CBAJ_G0032373.1 mouse_genomes_project 7 115448986 115480005 - MGP_CBAJ_P0085087 protein_coding protein_coding MGP_CBAJ_T0085098.1 MGP_CBAJ_G0032373.1 mouse_genomes_project 7 115470964 115480012 - MGP_CBAJ_P0085098 protein_coding protein_coding MGP_CBAJ_T0085100.1 MGP_CBAJ_G0032373.1 mouse_genomes_project 7 115474743 115479892 - protein_coding processed_transcript MGP_CBAJ_T0085101.1 MGP_CBAJ_G0032373.1 mouse_genomes_project 7 115475625 115480015 - protein_coding retained_intron MGP_CBAJ_T0084771.1 MGP_CBAJ_G0032239.1 mouse_genomes_project 7 111041322 111044423 + MGP_CBAJ_P0084771 Coa4 protein_coding protein_coding MGP_CBAJ_T0084772.1 MGP_CBAJ_G0032239.1 mouse_genomes_project 7 111041454 111043520 + MGP_CBAJ_P0084772 Coa4 protein_coding protein_coding MGP_CBAJ_T0005072.1 MGP_CBAJ_G0004317.1 mouse_genomes_project 7 18464773 18465539 - Gm45058 antisense antisense MGP_CBAJ_T0011555.1 MGP_CBAJ_G0009693.1 mouse_genomes_project 7 31707358 31707729 + Gm24757 misc_RNA misc_RNA MGP_CBAJ_T0015617.1 MGP_CBAJ_G0013729.1 mouse_genomes_project 7 83199498 83199850 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005091.1 MGP_CBAJ_G0004330.1 mouse_genomes_project 7 26656218 26659087 - Gm44963 antisense antisense MGP_CBAJ_T0015525.1 MGP_CBAJ_G0013637.1 mouse_genomes_project 7 27637762 27639057 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0086872.1 MGP_CBAJ_G0032822.1 mouse_genomes_project 7 155029680 155132777 - MGP_CBAJ_P0086872 protein_coding protein_coding MGP_CBAJ_T0086873.1 MGP_CBAJ_G0032822.1 mouse_genomes_project 7 155029680 155051131 - MGP_CBAJ_P0086873 protein_coding protein_coding MGP_CBAJ_T0086874.1 MGP_CBAJ_G0032822.1 mouse_genomes_project 7 155029680 155038585 - MGP_CBAJ_P0086874 protein_coding protein_coding MGP_CBAJ_T0086875.1 MGP_CBAJ_G0032822.1 mouse_genomes_project 7 155029809 155051111 - protein_coding retained_intron MGP_CBAJ_T0086876.1 MGP_CBAJ_G0032822.1 mouse_genomes_project 7 155046777 155051131 - protein_coding retained_intron MGP_CBAJ_T0086877.1 MGP_CBAJ_G0032822.1 mouse_genomes_project 7 155080339 155105680 - MGP_CBAJ_P0086877 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086878.1 MGP_CBAJ_G0032822.1 mouse_genomes_project 7 155080339 155132777 - MGP_CBAJ_P0086878 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086879.1 MGP_CBAJ_G0032822.1 mouse_genomes_project 7 155087288 155132777 - protein_coding retained_intron MGP_CBAJ_T0086880.1 MGP_CBAJ_G0032822.1 mouse_genomes_project 7 155123374 155132777 - MGP_CBAJ_P0086880 protein_coding protein_coding MGP_CBAJ_T0086881.1 MGP_CBAJ_G0032822.1 mouse_genomes_project 7 155127228 155132777 - protein_coding retained_intron MGP_CBAJ_T0011565.1 MGP_CBAJ_G0009703.1 mouse_genomes_project 7 105049462 105049755 + Gm23884 misc_RNA misc_RNA MGP_CBAJ_T0002184.1 MGP_CBAJ_G0002099.1 mouse_genomes_project 7 47100256 47100777 + TEC TEC MGP_CBAJ_T0100725.1 MGP_CBAJ_G0038980.1 mouse_genomes_project 7 48151795 48151885 + Snord88a snoRNA snoRNA MGP_CBAJ_T0082088.1 MGP_CBAJ_G0031586.1 mouse_genomes_project 7 28243134 28251043 + MGP_CBAJ_P0082088 Hipk4 protein_coding protein_coding MGP_CBAJ_T0082089.1 MGP_CBAJ_G0031586.1 mouse_genomes_project 7 28246926 28251038 + MGP_CBAJ_P0082089 Hipk4 protein_coding protein_coding MGP_CBAJ_T0081127.1 MGP_CBAJ_G0031288.1 mouse_genomes_project 7 8495915 8540323 + MGP_CBAJ_P0081127 Nlrp4b protein_coding protein_coding MGP_CBAJ_T0081128.1 MGP_CBAJ_G0031288.1 mouse_genomes_project 7 8495943 8540333 + MGP_CBAJ_P0081128 Nlrp4b protein_coding protein_coding MGP_CBAJ_T0081129.1 MGP_CBAJ_G0031288.1 mouse_genomes_project 7 8525151 8537300 + MGP_CBAJ_P0081129 Nlrp4b protein_coding protein_coding MGP_CBAJ_T0081024.1 MGP_CBAJ_G0031234.1 mouse_genomes_project 7 2219332 2231876 - Zfp579 protein_coding processed_transcript MGP_CBAJ_T0081025.1 MGP_CBAJ_G0031234.1 mouse_genomes_project 7 2228672 2231979 - Zfp579 protein_coding processed_transcript MGP_CBAJ_T0081026.1 MGP_CBAJ_G0031234.1 mouse_genomes_project 7 2228672 2231161 - MGP_CBAJ_P0081026 Zfp579 protein_coding protein_coding MGP_CBAJ_T0081027.1 MGP_CBAJ_G0031234.1 mouse_genomes_project 7 2228674 2231922 - MGP_CBAJ_P0081027 Zfp579 protein_coding protein_coding MGP_CBAJ_T0081028.1 MGP_CBAJ_G0031234.1 mouse_genomes_project 7 2230021 2231906 - MGP_CBAJ_P0081028 Zfp579 protein_coding protein_coding MGP_CBAJ_T0081029.1 MGP_CBAJ_G0031234.1 mouse_genomes_project 7 2230831 2231850 - Zfp579 protein_coding processed_transcript MGP_CBAJ_T0085005.1 MGP_CBAJ_G0032302.1 mouse_genomes_project 7 113873332 113874289 - MGP_CBAJ_P0085005 Olfr575 protein_coding protein_coding MGP_CBAJ_T0085677.1 MGP_CBAJ_G0032577.1 mouse_genomes_project 7 131894094 131941148 + Iqck protein_coding retained_intron MGP_CBAJ_T0085678.1 MGP_CBAJ_G0032577.1 mouse_genomes_project 7 131894109 132021148 + MGP_CBAJ_P0085678 Iqck protein_coding protein_coding MGP_CBAJ_T0085679.1 MGP_CBAJ_G0032577.1 mouse_genomes_project 7 131894109 132021680 + MGP_CBAJ_P0085679 Iqck protein_coding protein_coding MGP_CBAJ_T0085680.1 MGP_CBAJ_G0032577.1 mouse_genomes_project 7 131894109 132021316 + MGP_CBAJ_P0085680 Iqck protein_coding nonsense_mediated_decay MGP_CBAJ_T0085681.1 MGP_CBAJ_G0032577.1 mouse_genomes_project 7 131984353 132020794 + Iqck protein_coding processed_transcript MGP_CBAJ_T0086420.1 MGP_CBAJ_G0032726.1 mouse_genomes_project 7 141973320 141976551 + Hsd3b7 protein_coding retained_intron MGP_CBAJ_T0086421.1 MGP_CBAJ_G0032726.1 mouse_genomes_project 7 141973320 141976551 + Hsd3b7 protein_coding retained_intron MGP_CBAJ_T0086422.1 MGP_CBAJ_G0032726.1 mouse_genomes_project 7 141973330 141976551 + MGP_CBAJ_P0086422 Hsd3b7 protein_coding protein_coding MGP_CBAJ_T0086423.1 MGP_CBAJ_G0032726.1 mouse_genomes_project 7 141973330 141975147 + MGP_CBAJ_P0086423 Hsd3b7 protein_coding protein_coding MGP_CBAJ_T0086424.1 MGP_CBAJ_G0032726.1 mouse_genomes_project 7 141973352 141974771 + MGP_CBAJ_P0086424 Hsd3b7 protein_coding protein_coding MGP_CBAJ_T0086425.1 MGP_CBAJ_G0032726.1 mouse_genomes_project 7 141973362 141976559 + MGP_CBAJ_P0086425 Hsd3b7 protein_coding protein_coding MGP_CBAJ_T0086426.1 MGP_CBAJ_G0032726.1 mouse_genomes_project 7 141973362 141975019 + MGP_CBAJ_P0086426 Hsd3b7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086427.1 MGP_CBAJ_G0032726.1 mouse_genomes_project 7 141973363 141974972 + Hsd3b7 protein_coding retained_intron MGP_CBAJ_T0086428.1 MGP_CBAJ_G0032726.1 mouse_genomes_project 7 141973374 141974862 + Hsd3b7 protein_coding retained_intron MGP_CBAJ_T0086429.1 MGP_CBAJ_G0032726.1 mouse_genomes_project 7 141973387 141975076 + Hsd3b7 protein_coding retained_intron MGP_CBAJ_T0086430.1 MGP_CBAJ_G0032726.1 mouse_genomes_project 7 141973396 141974787 + MGP_CBAJ_P0086430 Hsd3b7 protein_coding protein_coding MGP_CBAJ_T0086431.1 MGP_CBAJ_G0032726.1 mouse_genomes_project 7 141973666 141974244 + MGP_CBAJ_P0086431 Hsd3b7 protein_coding protein_coding MGP_CBAJ_T0086826.1 MGP_CBAJ_G0032812.1 mouse_genomes_project 7 154192121 154206532 - MGP_CBAJ_P0086826 Mapk1ip1 protein_coding protein_coding MGP_CBAJ_T0086827.1 MGP_CBAJ_G0032812.1 mouse_genomes_project 7 154192131 154206519 - MGP_CBAJ_P0086827 Mapk1ip1 protein_coding protein_coding MGP_CBAJ_T0086828.1 MGP_CBAJ_G0032812.1 mouse_genomes_project 7 154192176 154206516 - MGP_CBAJ_P0086828 Mapk1ip1 protein_coding protein_coding MGP_CBAJ_T0083035.1 MGP_CBAJ_G0031807.1 mouse_genomes_project 7 47250893 47265013 + MGP_CBAJ_P0083035 Zfp719 protein_coding protein_coding MGP_CBAJ_T0083036.1 MGP_CBAJ_G0031807.1 mouse_genomes_project 7 47250902 47261353 + MGP_CBAJ_P0083036 Zfp719 protein_coding protein_coding MGP_CBAJ_T0083037.1 MGP_CBAJ_G0031807.1 mouse_genomes_project 7 47250922 47256286 + Zfp719 protein_coding retained_intron MGP_CBAJ_T0099472.1 MGP_CBAJ_G0037727.1 mouse_genomes_project 7 1928865 1928967 + Gm24537 snRNA snRNA MGP_CBAJ_T0086243.1 MGP_CBAJ_G0032689.1 mouse_genomes_project 7 141036614 141037843 - MGP_CBAJ_P0086243 Kif22 protein_coding protein_coding MGP_CBAJ_T0086244.1 MGP_CBAJ_G0032689.1 mouse_genomes_project 7 141036616 141051031 - MGP_CBAJ_P0086244 Kif22 protein_coding protein_coding MGP_CBAJ_T0086245.1 MGP_CBAJ_G0032689.1 mouse_genomes_project 7 141036617 141037002 - Kif22 protein_coding retained_intron MGP_CBAJ_T0086246.1 MGP_CBAJ_G0032689.1 mouse_genomes_project 7 141037989 141041590 - Kif22 protein_coding retained_intron MGP_CBAJ_T0086247.1 MGP_CBAJ_G0032689.1 mouse_genomes_project 7 141041113 141050969 - Kif22 protein_coding retained_intron MGP_CBAJ_T0086248.1 MGP_CBAJ_G0032689.1 mouse_genomes_project 7 141042470 141050966 - MGP_CBAJ_P0086248 Kif22 protein_coding protein_coding MGP_CBAJ_T0102067.1 MGP_CBAJ_G0040097.1 mouse_genomes_project 7 10180677 10181666 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0005092.1 MGP_CBAJ_G0004331.1 mouse_genomes_project 7 27749421 27758508 - Gm15883 antisense antisense MGP_CBAJ_T0083652.1 MGP_CBAJ_G0031975.1 mouse_genomes_project 7 56852868 56854559 - MGP_CBAJ_P0083652 Fancf protein_coding protein_coding MGP_CBAJ_T0085060.1 MGP_CBAJ_G0032355.1 mouse_genomes_project 7 115151139 115320175 - MGP_CBAJ_P0085060 protein_coding protein_coding MGP_CBAJ_T0083804.1 MGP_CBAJ_G0032007.1 mouse_genomes_project 7 70542321 70560168 - MGP_CBAJ_P0083804 Mphosph10 protein_coding protein_coding MGP_CBAJ_T0083805.1 MGP_CBAJ_G0032007.1 mouse_genomes_project 7 70543070 70552423 - Mphosph10 protein_coding retained_intron MGP_CBAJ_T0083806.1 MGP_CBAJ_G0032007.1 mouse_genomes_project 7 70555888 70560136 - Mphosph10 protein_coding retained_intron MGP_CBAJ_T0082840.1 MGP_CBAJ_G0031759.1 mouse_genomes_project 7 37636735 37641415 - MGP_CBAJ_P0082840 Faap24 protein_coding protein_coding MGP_CBAJ_T0082841.1 MGP_CBAJ_G0031759.1 mouse_genomes_project 7 37636888 37641292 - Faap24 protein_coding retained_intron MGP_CBAJ_T0082842.1 MGP_CBAJ_G0031759.1 mouse_genomes_project 7 37637279 37641287 - MGP_CBAJ_P0082842 Faap24 protein_coding protein_coding MGP_CBAJ_T0085061.1 MGP_CBAJ_G0032356.1 mouse_genomes_project 7 115155580 115156546 + MGP_CBAJ_P0085061 Olfr638 protein_coding protein_coding MGP_CBAJ_T0080851.1 MGP_CBAJ_G0031198.1 mouse_genomes_project 7 1269596 1275767 + Ttyh1 protein_coding processed_transcript MGP_CBAJ_T0080852.1 MGP_CBAJ_G0031198.1 mouse_genomes_project 7 1269718 1285107 + Ttyh1 protein_coding retained_intron MGP_CBAJ_T0080853.1 MGP_CBAJ_G0031198.1 mouse_genomes_project 7 1269718 1285505 + MGP_CBAJ_P0080853 Ttyh1 protein_coding protein_coding MGP_CBAJ_T0080854.1 MGP_CBAJ_G0031198.1 mouse_genomes_project 7 1269721 1286718 + MGP_CBAJ_P0080854 Ttyh1 protein_coding protein_coding MGP_CBAJ_T0080855.1 MGP_CBAJ_G0031198.1 mouse_genomes_project 7 1269744 1275798 + Ttyh1 protein_coding processed_transcript MGP_CBAJ_T0080856.1 MGP_CBAJ_G0031198.1 mouse_genomes_project 7 1269773 1285491 + MGP_CBAJ_P0080856 Ttyh1 protein_coding protein_coding MGP_CBAJ_T0080857.1 MGP_CBAJ_G0031198.1 mouse_genomes_project 7 1269776 1275807 + MGP_CBAJ_P0080857 Ttyh1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080858.1 MGP_CBAJ_G0031198.1 mouse_genomes_project 7 1269810 1278444 + MGP_CBAJ_P0080858 Ttyh1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080859.1 MGP_CBAJ_G0031198.1 mouse_genomes_project 7 1269942 1285488 + MGP_CBAJ_P0080859 Ttyh1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080860.1 MGP_CBAJ_G0031198.1 mouse_genomes_project 7 1270408 1275739 + Ttyh1 protein_coding processed_transcript MGP_CBAJ_T0080861.1 MGP_CBAJ_G0031198.1 mouse_genomes_project 7 1272329 1285565 + Ttyh1 protein_coding retained_intron MGP_CBAJ_T0080862.1 MGP_CBAJ_G0031198.1 mouse_genomes_project 7 1274667 1284397 + MGP_CBAJ_P0080862 Ttyh1 protein_coding protein_coding MGP_CBAJ_T0080863.1 MGP_CBAJ_G0031198.1 mouse_genomes_project 7 1275845 1283577 + Ttyh1 protein_coding processed_transcript MGP_CBAJ_T0080864.1 MGP_CBAJ_G0031198.1 mouse_genomes_project 7 1278404 1280298 + Ttyh1 protein_coding retained_intron MGP_CBAJ_T0080865.1 MGP_CBAJ_G0031198.1 mouse_genomes_project 7 1279424 1283355 + Ttyh1 protein_coding retained_intron MGP_CBAJ_T0080866.1 MGP_CBAJ_G0031198.1 mouse_genomes_project 7 1280797 1282048 + Ttyh1 protein_coding retained_intron MGP_CBAJ_T0080867.1 MGP_CBAJ_G0031198.1 mouse_genomes_project 7 1281315 1282192 + Ttyh1 protein_coding retained_intron MGP_CBAJ_T0080868.1 MGP_CBAJ_G0031198.1 mouse_genomes_project 7 1283187 1284130 + Ttyh1 protein_coding retained_intron MGP_CBAJ_T0083661.1 MGP_CBAJ_G0031977.1 mouse_genomes_project 7 57019094 57030045 - MGP_CBAJ_P0083661 Svip protein_coding protein_coding MGP_CBAJ_T0086505.1 MGP_CBAJ_G0032742.1 mouse_genomes_project 7 142304626 142389198 + MGP_CBAJ_P0086505 Itgam protein_coding protein_coding MGP_CBAJ_T0086509.1 MGP_CBAJ_G0032742.1 mouse_genomes_project 7 142372719 142388254 + MGP_CBAJ_P0086509 Itgam protein_coding protein_coding MGP_CBAJ_T0080751.1 MGP_CBAJ_G0031178.1 mouse_genomes_project 7 267384 279769 + MGP_CBAJ_P0080751 Myadm protein_coding protein_coding MGP_CBAJ_T0080753.1 MGP_CBAJ_G0031178.1 mouse_genomes_project 7 268838 280833 + MGP_CBAJ_P0080753 Myadm protein_coding protein_coding MGP_CBAJ_T0080754.1 MGP_CBAJ_G0031178.1 mouse_genomes_project 7 268879 281926 + MGP_CBAJ_P0080754 Myadm protein_coding protein_coding MGP_CBAJ_T0080755.1 MGP_CBAJ_G0031178.1 mouse_genomes_project 7 269794 278451 + MGP_CBAJ_P0080755 Myadm protein_coding protein_coding MGP_CBAJ_T0080756.1 MGP_CBAJ_G0031178.1 mouse_genomes_project 7 271385 280806 + MGP_CBAJ_P0080756 Myadm protein_coding protein_coding MGP_CBAJ_T0085537.1 MGP_CBAJ_G0032555.1 mouse_genomes_project 7 127156116 127160972 - MGP_CBAJ_P0085537 Calca protein_coding protein_coding MGP_CBAJ_T0085538.1 MGP_CBAJ_G0032555.1 mouse_genomes_project 7 127156206 127157284 - Calca protein_coding retained_intron MGP_CBAJ_T0085539.1 MGP_CBAJ_G0032555.1 mouse_genomes_project 7 127157190 127160922 - MGP_CBAJ_P0085539 Calca protein_coding protein_coding MGP_CBAJ_T0085540.1 MGP_CBAJ_G0032555.1 mouse_genomes_project 7 127157907 127160927 - MGP_CBAJ_P0085540 Calca protein_coding protein_coding MGP_CBAJ_T0085541.1 MGP_CBAJ_G0032555.1 mouse_genomes_project 7 127158024 127160910 - MGP_CBAJ_P0085541 Calca protein_coding protein_coding MGP_CBAJ_T0085542.1 MGP_CBAJ_G0032555.1 mouse_genomes_project 7 127158955 127160921 - MGP_CBAJ_P0085542 Calca protein_coding protein_coding MGP_CBAJ_T0085543.1 MGP_CBAJ_G0032555.1 mouse_genomes_project 7 127158986 127160886 - MGP_CBAJ_P0085543 Calca protein_coding protein_coding MGP_CBAJ_T0085277.1 MGP_CBAJ_G0032455.1 mouse_genomes_project 7 118647710 118648661 - MGP_CBAJ_P0085277 Olfr6 protein_coding protein_coding MGP_CBAJ_T0005103.1 MGP_CBAJ_G0004341.1 mouse_genomes_project 7 32155034 32174132 + Tmem147os antisense antisense MGP_CBAJ_T0005104.1 MGP_CBAJ_G0004341.1 mouse_genomes_project 7 32159609 32165198 + Tmem147os antisense antisense MGP_CBAJ_T0005191.1 MGP_CBAJ_G0004402.1 mouse_genomes_project 7 125946698 125972369 - Far1os antisense antisense MGP_CBAJ_T0005192.1 MGP_CBAJ_G0004402.1 mouse_genomes_project 7 125954052 125981171 - Far1os antisense antisense MGP_CBAJ_T0085161.1 MGP_CBAJ_G0032421.1 mouse_genomes_project 7 116769787 116820549 + MGP_CBAJ_P0085161 Cckbr protein_coding protein_coding MGP_CBAJ_T0085162.1 MGP_CBAJ_G0032421.1 mouse_genomes_project 7 116769790 116782869 + MGP_CBAJ_P0085162 Cckbr protein_coding protein_coding MGP_CBAJ_T0002278.1 MGP_CBAJ_G0002192.1 mouse_genomes_project 7 142895699 142896311 + TEC TEC MGP_CBAJ_T0015521.1 MGP_CBAJ_G0013633.1 mouse_genomes_project 7 26203294 26203463 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0086812.1 MGP_CBAJ_G0032807.1 mouse_genomes_project 7 152089528 152325995 + MGP_CBAJ_P0086812 Mgmt protein_coding protein_coding MGP_CBAJ_T0102097.1 MGP_CBAJ_G0040127.1 mouse_genomes_project 7 16011595 16011956 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099488.1 MGP_CBAJ_G0037743.1 mouse_genomes_project 7 50090424 50090509 - Gm22098 snRNA snRNA MGP_CBAJ_T0084558.1 MGP_CBAJ_G0032188.1 mouse_genomes_project 7 107421630 107439366 + MGP_CBAJ_P0084558 Kctd21 protein_coding protein_coding MGP_CBAJ_T0081033.1 MGP_CBAJ_G0031236.1 mouse_genomes_project 7 2256896 2259876 + MGP_CBAJ_P0081033 Zfp524 protein_coding protein_coding MGP_CBAJ_T0002269.1 MGP_CBAJ_G0002183.1 mouse_genomes_project 7 140940515 140942267 + TEC TEC MGP_CBAJ_T0015635.1 MGP_CBAJ_G0013747.1 mouse_genomes_project 7 103933337 103933607 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002284.1 MGP_CBAJ_G0002198.1 mouse_genomes_project 7 159261257 159262659 + TEC TEC MGP_CBAJ_T0081016.1 MGP_CBAJ_G0031230.1 mouse_genomes_project 7 2151902 2154628 + MGP_CBAJ_P0081016 Nat14 protein_coding protein_coding MGP_CBAJ_T0085308.1 MGP_CBAJ_G0032479.1 mouse_genomes_project 7 119823491 119824602 + MGP_CBAJ_P0085308 Olfr479 protein_coding protein_coding MGP_CBAJ_T0018082.1 MGP_CBAJ_G0015404.1 mouse_genomes_project 7 45932268 45979481 - processed_transcript lincRNA MGP_CBAJ_T0085165.1 MGP_CBAJ_G0032424.1 mouse_genomes_project 7 116925686 116951156 - MGP_CBAJ_P0085165 Apbb1 protein_coding protein_coding MGP_CBAJ_T0085166.1 MGP_CBAJ_G0032424.1 mouse_genomes_project 7 116925687 116950781 - MGP_CBAJ_P0085166 Apbb1 protein_coding protein_coding MGP_CBAJ_T0085167.1 MGP_CBAJ_G0032424.1 mouse_genomes_project 7 116925687 116936063 - MGP_CBAJ_P0085167 Apbb1 protein_coding protein_coding MGP_CBAJ_T0085168.1 MGP_CBAJ_G0032424.1 mouse_genomes_project 7 116925687 116936583 - MGP_CBAJ_P0085168 Apbb1 protein_coding protein_coding MGP_CBAJ_T0085169.1 MGP_CBAJ_G0032424.1 mouse_genomes_project 7 116925687 116936799 - MGP_CBAJ_P0085169 Apbb1 protein_coding protein_coding MGP_CBAJ_T0085170.1 MGP_CBAJ_G0032424.1 mouse_genomes_project 7 116925689 116950744 - MGP_CBAJ_P0085170 Apbb1 protein_coding protein_coding MGP_CBAJ_T0085171.1 MGP_CBAJ_G0032424.1 mouse_genomes_project 7 116925690 116936242 - Apbb1 protein_coding retained_intron MGP_CBAJ_T0085172.1 MGP_CBAJ_G0032424.1 mouse_genomes_project 7 116925706 116950994 - MGP_CBAJ_P0085172 Apbb1 protein_coding protein_coding MGP_CBAJ_T0085173.1 MGP_CBAJ_G0032424.1 mouse_genomes_project 7 116925726 116936578 - MGP_CBAJ_P0085173 Apbb1 protein_coding protein_coding MGP_CBAJ_T0085174.1 MGP_CBAJ_G0032424.1 mouse_genomes_project 7 116926021 116936063 - MGP_CBAJ_P0085174 Apbb1 protein_coding protein_coding MGP_CBAJ_T0085175.1 MGP_CBAJ_G0032424.1 mouse_genomes_project 7 116926364 116932791 - Apbb1 protein_coding retained_intron MGP_CBAJ_T0085176.1 MGP_CBAJ_G0032424.1 mouse_genomes_project 7 116926671 116934580 - Apbb1 protein_coding retained_intron MGP_CBAJ_T0085177.1 MGP_CBAJ_G0032424.1 mouse_genomes_project 7 116932875 116950695 - MGP_CBAJ_P0085177 Apbb1 protein_coding protein_coding MGP_CBAJ_T0085178.1 MGP_CBAJ_G0032424.1 mouse_genomes_project 7 116933392 116936249 - MGP_CBAJ_P0085178 Apbb1 protein_coding protein_coding MGP_CBAJ_T0085179.1 MGP_CBAJ_G0032424.1 mouse_genomes_project 7 116933835 116936551 - MGP_CBAJ_P0085179 Apbb1 protein_coding protein_coding MGP_CBAJ_T0085180.1 MGP_CBAJ_G0032424.1 mouse_genomes_project 7 116933950 116936559 - MGP_CBAJ_P0085180 Apbb1 protein_coding protein_coding MGP_CBAJ_T0085181.1 MGP_CBAJ_G0032424.1 mouse_genomes_project 7 116934379 116936878 - MGP_CBAJ_P0085181 Apbb1 protein_coding protein_coding MGP_CBAJ_T0085182.1 MGP_CBAJ_G0032424.1 mouse_genomes_project 7 116934453 116935956 - Apbb1 protein_coding retained_intron MGP_CBAJ_T0085183.1 MGP_CBAJ_G0032424.1 mouse_genomes_project 7 116941205 116950691 - MGP_CBAJ_P0085183 Apbb1 protein_coding protein_coding MGP_CBAJ_T0085911.1 MGP_CBAJ_G0032635.1 mouse_genomes_project 7 137067880 137101474 - MGP_CBAJ_P0085911 Zkscan2 protein_coding protein_coding MGP_CBAJ_T0085912.1 MGP_CBAJ_G0032635.1 mouse_genomes_project 7 137070240 137073426 - Zkscan2 protein_coding retained_intron MGP_CBAJ_T0085913.1 MGP_CBAJ_G0032635.1 mouse_genomes_project 7 137072638 137086012 - MGP_CBAJ_P0085913 Zkscan2 protein_coding protein_coding MGP_CBAJ_T0085914.1 MGP_CBAJ_G0032635.1 mouse_genomes_project 7 137095248 137101474 - MGP_CBAJ_P0085914 Zkscan2 protein_coding protein_coding MGP_CBAJ_T0083033.1 MGP_CBAJ_G0031806.1 mouse_genomes_project 7 47233204 47246701 + MGP_CBAJ_P0083033 Zfp658 protein_coding protein_coding MGP_CBAJ_T0083034.1 MGP_CBAJ_G0031806.1 mouse_genomes_project 7 47235732 47246206 + MGP_CBAJ_P0083034 Zfp658 protein_coding protein_coding MGP_CBAJ_T0098458.1 MGP_CBAJ_G0036719.1 mouse_genomes_project 7 136527229 136527813 + Gm20274 sense_intronic sense_intronic MGP_CBAJ_T0081070.1 MGP_CBAJ_G0031257.1 mouse_genomes_project 7 3583738 3604506 + MGP_CBAJ_P0081070 Zscan5b protein_coding protein_coding MGP_CBAJ_T0081071.1 MGP_CBAJ_G0031257.1 mouse_genomes_project 7 3583755 3593429 + MGP_CBAJ_P0081071 Zscan5b protein_coding protein_coding MGP_CBAJ_T0081072.1 MGP_CBAJ_G0031257.1 mouse_genomes_project 7 3592203 3604273 + MGP_CBAJ_P0081072 Zscan5b protein_coding protein_coding MGP_CBAJ_T0005102.1 MGP_CBAJ_G0004340.1 mouse_genomes_project 7 31988030 31988650 - antisense antisense MGP_CBAJ_T0086132.1 MGP_CBAJ_G0032671.1 mouse_genomes_project 7 140771417 140775438 - MGP_CBAJ_P0086132 Aldoa protein_coding protein_coding MGP_CBAJ_T0086133.1 MGP_CBAJ_G0032671.1 mouse_genomes_project 7 140771418 140779369 - MGP_CBAJ_P0086133 Aldoa protein_coding protein_coding MGP_CBAJ_T0086134.1 MGP_CBAJ_G0032671.1 mouse_genomes_project 7 140771419 140775325 - MGP_CBAJ_P0086134 Aldoa protein_coding protein_coding MGP_CBAJ_T0086135.1 MGP_CBAJ_G0032671.1 mouse_genomes_project 7 140772095 140774466 - Aldoa protein_coding processed_transcript MGP_CBAJ_T0086136.1 MGP_CBAJ_G0032671.1 mouse_genomes_project 7 140772132 140774491 - Aldoa protein_coding retained_intron MGP_CBAJ_T0086137.1 MGP_CBAJ_G0032671.1 mouse_genomes_project 7 140772132 140773935 - Aldoa protein_coding retained_intron MGP_CBAJ_T0086138.1 MGP_CBAJ_G0032671.1 mouse_genomes_project 7 140772222 140778968 - MGP_CBAJ_P0086138 Aldoa protein_coding protein_coding MGP_CBAJ_T0086139.1 MGP_CBAJ_G0032671.1 mouse_genomes_project 7 140772454 140775177 - MGP_CBAJ_P0086139 Aldoa protein_coding protein_coding MGP_CBAJ_T0086140.1 MGP_CBAJ_G0032671.1 mouse_genomes_project 7 140772665 140775354 - Aldoa protein_coding retained_intron MGP_CBAJ_T0086141.1 MGP_CBAJ_G0032671.1 mouse_genomes_project 7 140772851 140775293 - MGP_CBAJ_P0086141 Aldoa protein_coding protein_coding MGP_CBAJ_T0086142.1 MGP_CBAJ_G0032671.1 mouse_genomes_project 7 140772901 140778958 - MGP_CBAJ_P0086142 Aldoa protein_coding protein_coding MGP_CBAJ_T0086143.1 MGP_CBAJ_G0032671.1 mouse_genomes_project 7 140773023 140779673 - MGP_CBAJ_P0086143 Aldoa protein_coding protein_coding MGP_CBAJ_T0083641.1 MGP_CBAJ_G0031970.1 mouse_genomes_project 7 54694650 54753260 + MGP_CBAJ_P0083641 Slc6a5 protein_coding protein_coding MGP_CBAJ_T0083642.1 MGP_CBAJ_G0031970.1 mouse_genomes_project 7 54696204 54748896 + MGP_CBAJ_P0083642 Slc6a5 protein_coding protein_coding MGP_CBAJ_T0015491.1 MGP_CBAJ_G0013603.1 mouse_genomes_project 7 14736133 14737093 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099516.1 MGP_CBAJ_G0037771.1 mouse_genomes_project 7 129413195 129413302 - Gm25423 snRNA snRNA MGP_CBAJ_T0080888.1 MGP_CBAJ_G0031205.1 mouse_genomes_project 7 1574609 1597473 - MGP_CBAJ_P0080888 Rdh13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080889.1 MGP_CBAJ_G0031205.1 mouse_genomes_project 7 1575506 1597521 - MGP_CBAJ_P0080889 Rdh13 protein_coding protein_coding MGP_CBAJ_T0080890.1 MGP_CBAJ_G0031205.1 mouse_genomes_project 7 1586983 1597053 - MGP_CBAJ_P0080890 Rdh13 protein_coding protein_coding MGP_CBAJ_T0080891.1 MGP_CBAJ_G0031205.1 mouse_genomes_project 7 1592284 1597465 - Rdh13 protein_coding retained_intron MGP_CBAJ_T0080892.1 MGP_CBAJ_G0031205.1 mouse_genomes_project 7 1594526 1597514 - Rdh13 protein_coding processed_transcript MGP_CBAJ_T0080893.1 MGP_CBAJ_G0031205.1 mouse_genomes_project 7 1596077 1597498 - Rdh13 protein_coding processed_transcript MGP_CBAJ_T0082158.1 MGP_CBAJ_G0031604.1 mouse_genomes_project 7 29166394 29167786 + MGP_CBAJ_P0082158 Eid2 protein_coding protein_coding MGP_CBAJ_T0080939.1 MGP_CBAJ_G0031211.1 mouse_genomes_project 7 1693603 1706100 - MGP_CBAJ_P0080939 Syt5 protein_coding protein_coding MGP_CBAJ_T0080940.1 MGP_CBAJ_G0031211.1 mouse_genomes_project 7 1705220 1707074 - MGP_CBAJ_P0080940 Syt5 protein_coding protein_coding MGP_CBAJ_T0080941.1 MGP_CBAJ_G0031211.1 mouse_genomes_project 7 1705825 1706506 - MGP_CBAJ_P0080941 Syt5 protein_coding protein_coding MGP_CBAJ_T0084303.1 MGP_CBAJ_G0032098.1 mouse_genomes_project 7 89574003 89690001 - MGP_CBAJ_P0084303 Cpeb1 protein_coding protein_coding MGP_CBAJ_T0084304.1 MGP_CBAJ_G0032098.1 mouse_genomes_project 7 89574005 89671658 - MGP_CBAJ_P0084304 Cpeb1 protein_coding protein_coding MGP_CBAJ_T0084305.1 MGP_CBAJ_G0032098.1 mouse_genomes_project 7 89574006 89690001 - MGP_CBAJ_P0084305 Cpeb1 protein_coding protein_coding MGP_CBAJ_T0084306.1 MGP_CBAJ_G0032098.1 mouse_genomes_project 7 89576298 89577488 - Cpeb1 protein_coding retained_intron MGP_CBAJ_T0084307.1 MGP_CBAJ_G0032098.1 mouse_genomes_project 7 89576579 89582973 - Cpeb1 protein_coding processed_transcript MGP_CBAJ_T0084308.1 MGP_CBAJ_G0032098.1 mouse_genomes_project 7 89589295 89601970 - Cpeb1 protein_coding retained_intron MGP_CBAJ_T0084309.1 MGP_CBAJ_G0032098.1 mouse_genomes_project 7 89589295 89690708 - Cpeb1 protein_coding processed_transcript MGP_CBAJ_T0084310.1 MGP_CBAJ_G0032098.1 mouse_genomes_project 7 89589459 89602014 - Cpeb1 protein_coding processed_transcript MGP_CBAJ_T0084311.1 MGP_CBAJ_G0032098.1 mouse_genomes_project 7 89671504 89690635 - Cpeb1 protein_coding processed_transcript MGP_CBAJ_T0011576.1 MGP_CBAJ_G0009714.1 mouse_genomes_project 7 159190356 159190475 + Gm27803 misc_RNA misc_RNA MGP_CBAJ_T0102111.1 MGP_CBAJ_G0040140.1 mouse_genomes_project 7 35366988 35368262 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085313.1 MGP_CBAJ_G0032484.1 mouse_genomes_project 7 119907499 119908597 - MGP_CBAJ_P0085313 protein_coding protein_coding MGP_CBAJ_T0018081.1 MGP_CBAJ_G0015403.1 mouse_genomes_project 7 32071346 32095877 - Gm21982 processed_transcript retained_intron MGP_CBAJ_T0082897.1 MGP_CBAJ_G0031768.1 mouse_genomes_project 7 38064589 38097559 - MGP_CBAJ_P0082897 Zfp507 protein_coding protein_coding MGP_CBAJ_T0082898.1 MGP_CBAJ_G0031768.1 mouse_genomes_project 7 38065973 38088614 - MGP_CBAJ_P0082898 Zfp507 protein_coding protein_coding MGP_CBAJ_T0082899.1 MGP_CBAJ_G0031768.1 mouse_genomes_project 7 38068220 38097537 - MGP_CBAJ_P0082899 Zfp507 protein_coding protein_coding MGP_CBAJ_T0082900.1 MGP_CBAJ_G0031768.1 mouse_genomes_project 7 38071049 38071357 - Zfp507 protein_coding processed_transcript MGP_CBAJ_T0082901.1 MGP_CBAJ_G0031768.1 mouse_genomes_project 7 38083912 38097556 - MGP_CBAJ_P0082901 Zfp507 protein_coding protein_coding MGP_CBAJ_T0082902.1 MGP_CBAJ_G0031768.1 mouse_genomes_project 7 38095579 38097524 - Zfp507 protein_coding retained_intron MGP_CBAJ_T0082903.1 MGP_CBAJ_G0031768.1 mouse_genomes_project 7 38096586 38097573 - Zfp507 protein_coding retained_intron MGP_CBAJ_T0082831.1 MGP_CBAJ_G0031757.1 mouse_genomes_project 7 37500847 37551034 - MGP_CBAJ_P0082831 Gpatch1 protein_coding protein_coding MGP_CBAJ_T0082832.1 MGP_CBAJ_G0031757.1 mouse_genomes_project 7 37500855 37551015 - MGP_CBAJ_P0082832 Gpatch1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082833.1 MGP_CBAJ_G0031757.1 mouse_genomes_project 7 37513628 37551034 - MGP_CBAJ_P0082833 Gpatch1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082834.1 MGP_CBAJ_G0031757.1 mouse_genomes_project 7 37513661 37515329 - Gpatch1 protein_coding retained_intron MGP_CBAJ_T0082835.1 MGP_CBAJ_G0031757.1 mouse_genomes_project 7 37536882 37550989 - Gpatch1 protein_coding retained_intron MGP_CBAJ_T0082085.1 MGP_CBAJ_G0031585.1 mouse_genomes_project 7 28212816 28240184 + MGP_CBAJ_P0082085 Prx protein_coding protein_coding MGP_CBAJ_T0082086.1 MGP_CBAJ_G0031585.1 mouse_genomes_project 7 28221805 28239804 + MGP_CBAJ_P0082086 Prx protein_coding protein_coding MGP_CBAJ_T0082087.1 MGP_CBAJ_G0031585.1 mouse_genomes_project 7 28224630 28240011 + MGP_CBAJ_P0082087 Prx protein_coding protein_coding MGP_CBAJ_T0010818.1 MGP_CBAJ_G0008956.1 mouse_genomes_project 7 160011390 160011475 + Mir3105 miRNA miRNA MGP_CBAJ_T0015711.1 MGP_CBAJ_G0013823.1 mouse_genomes_project 7 159538351 159538907 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0083557.1 MGP_CBAJ_G0031942.1 mouse_genomes_project 7 51124773 51157916 + MGP_CBAJ_P0083557 Gtf2h1 protein_coding protein_coding MGP_CBAJ_T0083558.1 MGP_CBAJ_G0031942.1 mouse_genomes_project 7 51124784 51133698 + MGP_CBAJ_P0083558 Gtf2h1 protein_coding protein_coding MGP_CBAJ_T0083559.1 MGP_CBAJ_G0031942.1 mouse_genomes_project 7 51125341 51157391 + MGP_CBAJ_P0083559 Gtf2h1 protein_coding protein_coding MGP_CBAJ_T0083560.1 MGP_CBAJ_G0031942.1 mouse_genomes_project 7 51130355 51157025 + MGP_CBAJ_P0083560 Gtf2h1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083561.1 MGP_CBAJ_G0031942.1 mouse_genomes_project 7 51137122 51147719 + Gtf2h1 protein_coding retained_intron MGP_CBAJ_T0084803.1 MGP_CBAJ_G0032247.1 mouse_genomes_project 7 111580402 111596056 - MGP_CBAJ_P0084803 P2ry2 protein_coding protein_coding MGP_CBAJ_T0084804.1 MGP_CBAJ_G0032247.1 mouse_genomes_project 7 111581057 111596041 - MGP_CBAJ_P0084804 P2ry2 protein_coding protein_coding MGP_CBAJ_T0015693.1 MGP_CBAJ_G0013805.1 mouse_genomes_project 7 141498487 141498775 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015505.1 MGP_CBAJ_G0013617.1 mouse_genomes_project 7 19553901 19554474 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0082159.1 MGP_CBAJ_G0031605.1 mouse_genomes_project 7 29177307 29179736 + MGP_CBAJ_P0082159 Eid2b protein_coding protein_coding MGP_CBAJ_T0083058.1 MGP_CBAJ_G0031817.1 mouse_genomes_project 7 47504556 47512345 + MGP_CBAJ_P0083058 Klk9 protein_coding protein_coding MGP_CBAJ_T0008821.1 MGP_CBAJ_G0007114.1 mouse_genomes_project 7 81028688 81068176 - Gm10619 lincRNA lincRNA MGP_CBAJ_T0008822.1 MGP_CBAJ_G0007114.1 mouse_genomes_project 7 81059966 81068248 - Gm10619 lincRNA lincRNA MGP_CBAJ_T0002157.1 MGP_CBAJ_G0002072.1 mouse_genomes_project 7 1828854 1830149 + TEC TEC MGP_CBAJ_T0084444.1 MGP_CBAJ_G0032156.1 mouse_genomes_project 7 96367701 96451457 - MGP_CBAJ_P0084444 Tyr protein_coding protein_coding MGP_CBAJ_T0100776.1 MGP_CBAJ_G0039031.1 mouse_genomes_project 7 157152975 157153112 + Snora52 snoRNA snoRNA MGP_CBAJ_T0099521.1 MGP_CBAJ_G0037776.1 mouse_genomes_project 7 136958097 136958200 - Gm23559 snRNA snRNA MGP_CBAJ_T0100729.1 MGP_CBAJ_G0038984.1 mouse_genomes_project 7 49187872 49189814 - Snord34 snoRNA snoRNA MGP_CBAJ_T0085403.1 MGP_CBAJ_G0032527.1 mouse_genomes_project 7 122276886 122338679 + MGP_CBAJ_P0085403 Swap70 protein_coding protein_coding MGP_CBAJ_T0081262.1 MGP_CBAJ_G0031342.1 mouse_genomes_project 7 12876785 12909150 - MGP_CBAJ_P0081262 Sult2a7 protein_coding protein_coding MGP_CBAJ_T0081263.1 MGP_CBAJ_G0031342.1 mouse_genomes_project 7 12876862 12908150 - MGP_CBAJ_P0081263 Sult2a7 protein_coding unknown_likely_coding MGP_CBAJ_T0081240.1 MGP_CBAJ_G0031330.1 mouse_genomes_project 7 11509173 11549699 + MGP_CBAJ_P0081240 Pla2g4c protein_coding protein_coding MGP_CBAJ_T0081241.1 MGP_CBAJ_G0031330.1 mouse_genomes_project 7 11510185 11551011 + MGP_CBAJ_P0081241 Pla2g4c protein_coding protein_coding MGP_CBAJ_T0081242.1 MGP_CBAJ_G0031330.1 mouse_genomes_project 7 11512969 11515821 + Pla2g4c protein_coding processed_transcript MGP_CBAJ_T0081243.1 MGP_CBAJ_G0031330.1 mouse_genomes_project 7 11515054 11551015 + MGP_CBAJ_P0081243 Pla2g4c protein_coding protein_coding MGP_CBAJ_T0084237.1 MGP_CBAJ_G0032086.1 mouse_genomes_project 7 88507130 88517415 - MGP_CBAJ_P0084237 Blm protein_coding protein_coding MGP_CBAJ_T0084238.1 MGP_CBAJ_G0032086.1 mouse_genomes_project 7 88507625 88599765 - MGP_CBAJ_P0084238 Blm protein_coding protein_coding MGP_CBAJ_T0084239.1 MGP_CBAJ_G0032086.1 mouse_genomes_project 7 88507724 88599644 - MGP_CBAJ_P0084239 Blm protein_coding protein_coding MGP_CBAJ_T0084240.1 MGP_CBAJ_G0032086.1 mouse_genomes_project 7 88507870 88510004 - Blm protein_coding processed_transcript MGP_CBAJ_T0084241.1 MGP_CBAJ_G0032086.1 mouse_genomes_project 7 88508025 88511885 - Blm protein_coding retained_intron MGP_CBAJ_T0084242.1 MGP_CBAJ_G0032086.1 mouse_genomes_project 7 88508053 88513456 - MGP_CBAJ_P0084242 Blm protein_coding nonsense_mediated_decay MGP_CBAJ_T0084243.1 MGP_CBAJ_G0032086.1 mouse_genomes_project 7 88517384 88520097 - MGP_CBAJ_P0084243 Blm protein_coding nonsense_mediated_decay MGP_CBAJ_T0084244.1 MGP_CBAJ_G0032086.1 mouse_genomes_project 7 88521845 88571531 - Blm protein_coding retained_intron MGP_CBAJ_T0084245.1 MGP_CBAJ_G0032086.1 mouse_genomes_project 7 88521871 88524379 - Blm protein_coding retained_intron MGP_CBAJ_T0084246.1 MGP_CBAJ_G0032086.1 mouse_genomes_project 7 88526728 88536645 - Blm protein_coding retained_intron MGP_CBAJ_T0084032.1 MGP_CBAJ_G0032050.1 mouse_genomes_project 7 86610503 86635170 - MGP_CBAJ_P0084032 Det1 protein_coding protein_coding MGP_CBAJ_T0084033.1 MGP_CBAJ_G0032050.1 mouse_genomes_project 7 86628936 86644220 - MGP_CBAJ_P0084033 Det1 protein_coding protein_coding MGP_CBAJ_T0084034.1 MGP_CBAJ_G0032050.1 mouse_genomes_project 7 86628938 86648233 - MGP_CBAJ_P0084034 Det1 protein_coding protein_coding MGP_CBAJ_T0015493.1 MGP_CBAJ_G0013605.1 mouse_genomes_project 7 15452336 15453075 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010721.1 MGP_CBAJ_G0008859.1 mouse_genomes_project 7 24268579 24271563 - miRNA miRNA MGP_CBAJ_T0082565.1 MGP_CBAJ_G0031699.1 mouse_genomes_project 7 31988720 31991256 + MGP_CBAJ_P0082565 Igflr1 protein_coding protein_coding MGP_CBAJ_T0082566.1 MGP_CBAJ_G0031699.1 mouse_genomes_project 7 31989373 31991253 + MGP_CBAJ_P0082566 Igflr1 protein_coding protein_coding MGP_CBAJ_T0083074.1 MGP_CBAJ_G0031826.1 mouse_genomes_project 7 48148447 48150413 + protein_coding processed_transcript MGP_CBAJ_T0083075.1 MGP_CBAJ_G0031826.1 mouse_genomes_project 7 48148447 48156170 + MGP_CBAJ_P0083075 protein_coding protein_coding MGP_CBAJ_T0083076.1 MGP_CBAJ_G0031826.1 mouse_genomes_project 7 48148449 48156170 + MGP_CBAJ_P0083076 protein_coding protein_coding MGP_CBAJ_T0083077.1 MGP_CBAJ_G0031826.1 mouse_genomes_project 7 48148457 48149827 + protein_coding processed_transcript MGP_CBAJ_T0083078.1 MGP_CBAJ_G0031826.1 mouse_genomes_project 7 48148460 48151716 + protein_coding processed_transcript MGP_CBAJ_T0083079.1 MGP_CBAJ_G0031826.1 mouse_genomes_project 7 48148468 48152142 + protein_coding processed_transcript MGP_CBAJ_T0083080.1 MGP_CBAJ_G0031826.1 mouse_genomes_project 7 48148478 48152189 + protein_coding processed_transcript MGP_CBAJ_T0083081.1 MGP_CBAJ_G0031826.1 mouse_genomes_project 7 48148891 48152462 + MGP_CBAJ_P0083081 protein_coding protein_coding MGP_CBAJ_T0083082.1 MGP_CBAJ_G0031826.1 mouse_genomes_project 7 48149102 48156170 + MGP_CBAJ_P0083082 protein_coding protein_coding MGP_CBAJ_T0083768.1 MGP_CBAJ_G0032002.1 mouse_genomes_project 7 69971750 70046883 - MGP_CBAJ_P0083768 Klf13 protein_coding protein_coding MGP_CBAJ_T0083769.1 MGP_CBAJ_G0032002.1 mouse_genomes_project 7 69976765 70044269 - MGP_CBAJ_P0083769 Klf13 protein_coding protein_coding MGP_CBAJ_T0083770.1 MGP_CBAJ_G0032002.1 mouse_genomes_project 7 69976782 70025065 - MGP_CBAJ_P0083770 Klf13 protein_coding protein_coding MGP_CBAJ_T0083772.1 MGP_CBAJ_G0032002.1 mouse_genomes_project 7 70043366 70044300 - Klf13 protein_coding retained_intron MGP_CBAJ_T0098450.1 MGP_CBAJ_G0036712.1 mouse_genomes_project 7 3797298 3797881 + Gm16306 sense_intronic sense_intronic MGP_CBAJ_T0082241.1 MGP_CBAJ_G0031630.1 mouse_genomes_project 7 29773880 29796261 + Sirt2 protein_coding processed_transcript MGP_CBAJ_T0082242.1 MGP_CBAJ_G0031630.1 mouse_genomes_project 7 29773897 29796266 + MGP_CBAJ_P0082242 Sirt2 protein_coding protein_coding MGP_CBAJ_T0082243.1 MGP_CBAJ_G0031630.1 mouse_genomes_project 7 29773912 29796261 + MGP_CBAJ_P0082243 Sirt2 protein_coding protein_coding MGP_CBAJ_T0082244.1 MGP_CBAJ_G0031630.1 mouse_genomes_project 7 29774892 29796261 + Sirt2 protein_coding processed_transcript MGP_CBAJ_T0082245.1 MGP_CBAJ_G0031630.1 mouse_genomes_project 7 29784451 29785282 + Sirt2 protein_coding retained_intron MGP_CBAJ_T0082246.1 MGP_CBAJ_G0031630.1 mouse_genomes_project 7 29784601 29790942 + Sirt2 protein_coding retained_intron MGP_CBAJ_T0082247.1 MGP_CBAJ_G0031630.1 mouse_genomes_project 7 29792228 29795368 + Sirt2 protein_coding processed_transcript MGP_CBAJ_T0082248.1 MGP_CBAJ_G0031630.1 mouse_genomes_project 7 29792985 29795227 + Sirt2 protein_coding retained_intron MGP_CBAJ_T0082249.1 MGP_CBAJ_G0031630.1 mouse_genomes_project 7 29793159 29795861 + Sirt2 protein_coding retained_intron MGP_CBAJ_T0010746.1 MGP_CBAJ_G0008884.1 mouse_genomes_project 7 49238263 49238322 + Mir7055 miRNA miRNA MGP_CBAJ_T0081967.1 MGP_CBAJ_G0031551.1 mouse_genomes_project 7 26131822 26165044 + MGP_CBAJ_P0081967 Cyp2b10 protein_coding protein_coding MGP_CBAJ_T0081968.1 MGP_CBAJ_G0031551.1 mouse_genomes_project 7 26131878 26164979 + MGP_CBAJ_P0081968 Cyp2b10 protein_coding protein_coding MGP_CBAJ_T0081969.1 MGP_CBAJ_G0031551.1 mouse_genomes_project 7 26150934 26151599 + Cyp2b10 protein_coding retained_intron MGP_CBAJ_T0082796.1 MGP_CBAJ_G0031750.1 mouse_genomes_project 7 36755820 36774274 - MGP_CBAJ_P0082796 Kctd15 protein_coding protein_coding MGP_CBAJ_T0082797.1 MGP_CBAJ_G0031750.1 mouse_genomes_project 7 36755821 36772713 - MGP_CBAJ_P0082797 Kctd15 protein_coding protein_coding MGP_CBAJ_T0082798.1 MGP_CBAJ_G0031750.1 mouse_genomes_project 7 36755825 36775357 - MGP_CBAJ_P0082798 Kctd15 protein_coding protein_coding MGP_CBAJ_T0082799.1 MGP_CBAJ_G0031750.1 mouse_genomes_project 7 36756988 36765553 - Kctd15 protein_coding processed_transcript MGP_CBAJ_T0082800.1 MGP_CBAJ_G0031750.1 mouse_genomes_project 7 36766795 36774265 - MGP_CBAJ_P0082800 Kctd15 protein_coding protein_coding MGP_CBAJ_T0082801.1 MGP_CBAJ_G0031750.1 mouse_genomes_project 7 36772507 36772902 - Kctd15 protein_coding processed_transcript MGP_CBAJ_T0082802.1 MGP_CBAJ_G0031750.1 mouse_genomes_project 7 36772507 36773188 - Kctd15 protein_coding processed_transcript MGP_CBAJ_T0082803.1 MGP_CBAJ_G0031750.1 mouse_genomes_project 7 36775217 36776580 - Kctd15 protein_coding processed_transcript MGP_CBAJ_T0002221.1 MGP_CBAJ_G0002135.1 mouse_genomes_project 7 81205044 81207208 - TEC TEC MGP_CBAJ_T0082627.1 MGP_CBAJ_G0031716.1 mouse_genomes_project 7 32339206 32341055 - MGP_CBAJ_P0082627 Ffar3 protein_coding protein_coding MGP_CBAJ_T0082628.1 MGP_CBAJ_G0031716.1 mouse_genomes_project 7 32339810 32341044 - MGP_CBAJ_P0082628 Ffar3 protein_coding protein_coding MGP_CBAJ_T0087202.1 MGP_CBAJ_G0032908.1 mouse_genomes_project 7 157360588 157388329 - MGP_CBAJ_P0087202 Muc6 protein_coding protein_coding MGP_CBAJ_T0087203.1 MGP_CBAJ_G0032908.1 mouse_genomes_project 7 157361095 157388329 - MGP_CBAJ_P0087203 Muc6 protein_coding protein_coding MGP_CBAJ_T0087204.1 MGP_CBAJ_G0032908.1 mouse_genomes_project 7 157361100 157388397 - MGP_CBAJ_P0087204 Muc6 protein_coding protein_coding MGP_CBAJ_T0008890.1 MGP_CBAJ_G0007155.1 mouse_genomes_project 7 127520462 127529442 - Gm45020 lincRNA lincRNA MGP_CBAJ_T0087265.1 MGP_CBAJ_G0032926.1 mouse_genomes_project 7 158289529 158292132 + MGP_CBAJ_P0087265 Tnni2 protein_coding protein_coding MGP_CBAJ_T0087266.1 MGP_CBAJ_G0032926.1 mouse_genomes_project 7 158289537 158291758 + MGP_CBAJ_P0087266 Tnni2 protein_coding protein_coding MGP_CBAJ_T0087267.1 MGP_CBAJ_G0032926.1 mouse_genomes_project 7 158290051 158292090 + MGP_CBAJ_P0087267 Tnni2 protein_coding protein_coding MGP_CBAJ_T0087268.1 MGP_CBAJ_G0032926.1 mouse_genomes_project 7 158290629 158292130 + Tnni2 protein_coding retained_intron MGP_CBAJ_T0087269.1 MGP_CBAJ_G0032926.1 mouse_genomes_project 7 158290701 158291581 + Tnni2 protein_coding retained_intron MGP_CBAJ_T0087270.1 MGP_CBAJ_G0032926.1 mouse_genomes_project 7 158290892 158292127 + MGP_CBAJ_P0087270 Tnni2 protein_coding protein_coding MGP_CBAJ_T0081402.1 MGP_CBAJ_G0031383.1 mouse_genomes_project 7 15927925 15943246 - MGP_CBAJ_P0081402 Calm3 protein_coding protein_coding MGP_CBAJ_T0081403.1 MGP_CBAJ_G0031383.1 mouse_genomes_project 7 15927947 15929760 - MGP_CBAJ_P0081403 Calm3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081404.1 MGP_CBAJ_G0031383.1 mouse_genomes_project 7 15928481 15929798 - MGP_CBAJ_P0081404 Calm3 protein_coding protein_coding MGP_CBAJ_T0081405.1 MGP_CBAJ_G0031383.1 mouse_genomes_project 7 15929738 15942961 - Calm3 protein_coding processed_transcript MGP_CBAJ_T0083050.1 MGP_CBAJ_G0031814.1 mouse_genomes_project 7 47478815 47483504 + MGP_CBAJ_P0083050 Klk12 protein_coding protein_coding MGP_CBAJ_T0083051.1 MGP_CBAJ_G0031814.1 mouse_genomes_project 7 47479018 47483394 + MGP_CBAJ_P0083051 Klk12 protein_coding protein_coding MGP_CBAJ_T0084982.1 MGP_CBAJ_G0032281.1 mouse_genomes_project 7 113425879 113433412 - MGP_CBAJ_P0084982 Trim21 protein_coding protein_coding MGP_CBAJ_T0084983.1 MGP_CBAJ_G0032281.1 mouse_genomes_project 7 113425879 113433412 - MGP_CBAJ_P0084983 Trim21 protein_coding protein_coding MGP_CBAJ_T0008942.1 MGP_CBAJ_G0007187.1 mouse_genomes_project 7 144427869 144444344 + Gm4265 lincRNA lincRNA MGP_CBAJ_T0085076.1 MGP_CBAJ_G0032370.1 mouse_genomes_project 7 115374551 115375502 - MGP_CBAJ_P0085076 Olfr648 protein_coding protein_coding MGP_CBAJ_T0083038.1 MGP_CBAJ_G0031808.1 mouse_genomes_project 7 47278989 47293190 + MGP_CBAJ_P0083038 Zfp819 protein_coding protein_coding MGP_CBAJ_T0083039.1 MGP_CBAJ_G0031808.1 mouse_genomes_project 7 47279029 47287526 + MGP_CBAJ_P0083039 Zfp819 protein_coding protein_coding MGP_CBAJ_T0083040.1 MGP_CBAJ_G0031808.1 mouse_genomes_project 7 47279045 47293259 + MGP_CBAJ_P0083040 Zfp819 protein_coding protein_coding MGP_CBAJ_T0083041.1 MGP_CBAJ_G0031808.1 mouse_genomes_project 7 47281727 47292892 + MGP_CBAJ_P0083041 Zfp819 protein_coding protein_coding MGP_CBAJ_T0085399.1 MGP_CBAJ_G0032524.1 mouse_genomes_project 7 122086717 122090056 - MGP_CBAJ_P0085399 protein_coding protein_coding MGP_CBAJ_T0086599.1 MGP_CBAJ_G0032759.1 mouse_genomes_project 7 144011768 144058073 + MGP_CBAJ_P0086599 Wdr11 protein_coding protein_coding MGP_CBAJ_T0086600.1 MGP_CBAJ_G0032759.1 mouse_genomes_project 7 144011813 144047975 + Wdr11 protein_coding retained_intron MGP_CBAJ_T0086601.1 MGP_CBAJ_G0032759.1 mouse_genomes_project 7 144011823 144034637 + Wdr11 protein_coding retained_intron MGP_CBAJ_T0086602.1 MGP_CBAJ_G0032759.1 mouse_genomes_project 7 144012973 144055190 + MGP_CBAJ_P0086602 Wdr11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086603.1 MGP_CBAJ_G0032759.1 mouse_genomes_project 7 144027412 144030143 + Wdr11 protein_coding processed_transcript MGP_CBAJ_T0086604.1 MGP_CBAJ_G0032759.1 mouse_genomes_project 7 144028903 144058071 + Wdr11 protein_coding retained_intron MGP_CBAJ_T0086605.1 MGP_CBAJ_G0032759.1 mouse_genomes_project 7 144030141 144036387 + MGP_CBAJ_P0086605 Wdr11 protein_coding protein_coding MGP_CBAJ_T0086606.1 MGP_CBAJ_G0032759.1 mouse_genomes_project 7 144047390 144058069 + Wdr11 protein_coding retained_intron MGP_CBAJ_T0086607.1 MGP_CBAJ_G0032759.1 mouse_genomes_project 7 144051367 144056006 + MGP_CBAJ_P0086607 Wdr11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0008708.1 MGP_CBAJ_G0007024.1 mouse_genomes_project 7 19378640 19383423 + Gm26600 lincRNA lincRNA MGP_CBAJ_T0005229.1 MGP_CBAJ_G0004430.1 mouse_genomes_project 7 157334202 157337884 - Gm16982 antisense antisense MGP_CBAJ_T0081971.1 MGP_CBAJ_G0031553.1 mouse_genomes_project 7 26481239 26525064 + MGP_CBAJ_P0081971 Cyp2b9 protein_coding protein_coding MGP_CBAJ_T0081182.1 MGP_CBAJ_G0031316.1 mouse_genomes_project 7 11124676 11130236 + MGP_CBAJ_P0081182 Zfp446 protein_coding protein_coding MGP_CBAJ_T0081183.1 MGP_CBAJ_G0031316.1 mouse_genomes_project 7 11124676 11131149 + MGP_CBAJ_P0081183 Zfp446 protein_coding protein_coding MGP_CBAJ_T0081184.1 MGP_CBAJ_G0031316.1 mouse_genomes_project 7 11124676 11130236 + MGP_CBAJ_P0081184 Zfp446 protein_coding protein_coding MGP_CBAJ_T0081185.1 MGP_CBAJ_G0031316.1 mouse_genomes_project 7 11124721 11128303 + Zfp446 protein_coding retained_intron MGP_CBAJ_T0081186.1 MGP_CBAJ_G0031316.1 mouse_genomes_project 7 11125068 11131155 + MGP_CBAJ_P0081186 Zfp446 protein_coding protein_coding MGP_CBAJ_T0081187.1 MGP_CBAJ_G0031316.1 mouse_genomes_project 7 11126350 11131180 + Zfp446 protein_coding retained_intron MGP_CBAJ_T0083043.1 MGP_CBAJ_G0031810.1 mouse_genomes_project 7 47328851 47344247 - MGP_CBAJ_P0083043 Siglece protein_coding protein_coding MGP_CBAJ_T0083044.1 MGP_CBAJ_G0031810.1 mouse_genomes_project 7 47329322 47343439 - MGP_CBAJ_P0083044 Siglece protein_coding protein_coding MGP_CBAJ_T0015462.1 MGP_CBAJ_G0013574.1 mouse_genomes_project 7 1559838 1560301 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0085967.1 MGP_CBAJ_G0032645.1 mouse_genomes_project 7 140178129 140200538 + MGP_CBAJ_P0085967 Sbk1 protein_coding protein_coding MGP_CBAJ_T0085968.1 MGP_CBAJ_G0032645.1 mouse_genomes_project 7 140178910 140195453 + MGP_CBAJ_P0085968 Sbk1 protein_coding protein_coding MGP_CBAJ_T0085969.1 MGP_CBAJ_G0032645.1 mouse_genomes_project 7 140196601 140198342 + MGP_CBAJ_P0085969 Sbk1 protein_coding protein_coding MGP_CBAJ_T0015710.1 MGP_CBAJ_G0013822.1 mouse_genomes_project 7 158633839 158634436 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099508.1 MGP_CBAJ_G0037763.1 mouse_genomes_project 7 115466876 115466976 - Gm24783 snRNA snRNA MGP_CBAJ_T0015593.1 MGP_CBAJ_G0013705.1 mouse_genomes_project 7 62321217 62322076 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0082745.1 MGP_CBAJ_G0031738.1 mouse_genomes_project 7 35673633 35675756 - MGP_CBAJ_P0082745 Scgb2b24 protein_coding protein_coding MGP_CBAJ_T0084355.1 MGP_CBAJ_G0032113.1 mouse_genomes_project 7 90986926 91002497 - MGP_CBAJ_P0084355 Saxo2 protein_coding protein_coding MGP_CBAJ_T0084356.1 MGP_CBAJ_G0032113.1 mouse_genomes_project 7 90988430 91002403 - MGP_CBAJ_P0084356 Saxo2 protein_coding unknown_likely_coding MGP_CBAJ_T0084357.1 MGP_CBAJ_G0032113.1 mouse_genomes_project 7 90989254 91002497 - Saxo2 protein_coding processed_transcript MGP_CBAJ_T0084358.1 MGP_CBAJ_G0032113.1 mouse_genomes_project 7 90996119 91002502 - Saxo2 protein_coding retained_intron MGP_CBAJ_T0084359.1 MGP_CBAJ_G0032113.1 mouse_genomes_project 7 91000149 91002502 - Saxo2 protein_coding processed_transcript MGP_CBAJ_T0085599.1 MGP_CBAJ_G0032562.1 mouse_genomes_project 7 129026575 129137449 - MGP_CBAJ_P0085599 Pik3c2a protein_coding protein_coding MGP_CBAJ_T0085600.1 MGP_CBAJ_G0032562.1 mouse_genomes_project 7 129026586 129030119 - Pik3c2a protein_coding retained_intron MGP_CBAJ_T0085601.1 MGP_CBAJ_G0032562.1 mouse_genomes_project 7 129028919 129060597 - MGP_CBAJ_P0085601 Pik3c2a protein_coding nonsense_mediated_decay MGP_CBAJ_T0085602.1 MGP_CBAJ_G0032562.1 mouse_genomes_project 7 129029041 129137449 - MGP_CBAJ_P0085602 Pik3c2a protein_coding protein_coding MGP_CBAJ_T0085603.1 MGP_CBAJ_G0032562.1 mouse_genomes_project 7 129031395 129032136 - Pik3c2a protein_coding retained_intron MGP_CBAJ_T0085604.1 MGP_CBAJ_G0032562.1 mouse_genomes_project 7 129082853 129137447 - MGP_CBAJ_P0085604 Pik3c2a protein_coding nonsense_mediated_decay MGP_CBAJ_T0085605.1 MGP_CBAJ_G0032562.1 mouse_genomes_project 7 129083845 129137439 - Pik3c2a protein_coding retained_intron MGP_CBAJ_T0010803.1 MGP_CBAJ_G0008941.1 mouse_genomes_project 7 145481679 145481747 + Mir7061 miRNA miRNA MGP_CBAJ_T0005162.1 MGP_CBAJ_G0004383.1 mouse_genomes_project 7 88841914 88853778 + antisense antisense MGP_CBAJ_T0005163.1 MGP_CBAJ_G0004383.1 mouse_genomes_project 7 88841937 88843266 + antisense antisense MGP_CBAJ_T0100749.1 MGP_CBAJ_G0039004.1 mouse_genomes_project 7 97399251 97399384 + Gm25345 snoRNA snoRNA MGP_CBAJ_T0083386.1 MGP_CBAJ_G0031899.1 mouse_genomes_project 7 49652984 49653838 - Ppp1r15a protein_coding processed_transcript MGP_CBAJ_T0083387.1 MGP_CBAJ_G0031899.1 mouse_genomes_project 7 49652985 49656109 - MGP_CBAJ_P0083387 Ppp1r15a protein_coding protein_coding MGP_CBAJ_T0083388.1 MGP_CBAJ_G0031899.1 mouse_genomes_project 7 49652990 49655987 - Ppp1r15a protein_coding retained_intron MGP_CBAJ_T0015470.1 MGP_CBAJ_G0013582.1 mouse_genomes_project 7 3311745 3312192 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0102129.1 MGP_CBAJ_G0040158.1 mouse_genomes_project 7 45599068 45599310 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085687.1 MGP_CBAJ_G0032583.1 mouse_genomes_project 7 132606731 132623951 + MGP_CBAJ_P0085687 Acsm5 protein_coding protein_coding MGP_CBAJ_T0085620.1 MGP_CBAJ_G0032566.1 mouse_genomes_project 7 131018818 131032960 - MGP_CBAJ_P0085620 Arl6ip1 protein_coding protein_coding MGP_CBAJ_T0085621.1 MGP_CBAJ_G0032566.1 mouse_genomes_project 7 131020185 131032406 - Arl6ip1 protein_coding processed_transcript MGP_CBAJ_T0085622.1 MGP_CBAJ_G0032566.1 mouse_genomes_project 7 131020233 131032874 - MGP_CBAJ_P0085622 Arl6ip1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085623.1 MGP_CBAJ_G0032566.1 mouse_genomes_project 7 131021128 131032872 - MGP_CBAJ_P0085623 Arl6ip1 protein_coding protein_coding MGP_CBAJ_T0085624.1 MGP_CBAJ_G0032566.1 mouse_genomes_project 7 131021155 131032858 - MGP_CBAJ_P0085624 Arl6ip1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085625.1 MGP_CBAJ_G0032566.1 mouse_genomes_project 7 131029628 131032870 - Arl6ip1 protein_coding retained_intron MGP_CBAJ_T0083350.1 MGP_CBAJ_G0031889.1 mouse_genomes_project 7 49513134 49518559 + MGP_CBAJ_P0083350 Kcna7 protein_coding protein_coding MGP_CBAJ_T0081359.1 MGP_CBAJ_G0031376.1 mouse_genomes_project 7 15759442 15776604 + MGP_CBAJ_P0081359 Slc1a5 protein_coding protein_coding MGP_CBAJ_T0081360.1 MGP_CBAJ_G0031376.1 mouse_genomes_project 7 15759470 15776604 + Slc1a5 protein_coding retained_intron MGP_CBAJ_T0081361.1 MGP_CBAJ_G0031376.1 mouse_genomes_project 7 15760507 15765317 + Slc1a5 protein_coding retained_intron MGP_CBAJ_T0081362.1 MGP_CBAJ_G0031376.1 mouse_genomes_project 7 15762844 15771964 + Slc1a5 protein_coding processed_transcript MGP_CBAJ_T0081363.1 MGP_CBAJ_G0031376.1 mouse_genomes_project 7 15763798 15765306 + Slc1a5 protein_coding retained_intron MGP_CBAJ_T0081364.1 MGP_CBAJ_G0031376.1 mouse_genomes_project 7 15764508 15772054 + Slc1a5 protein_coding retained_intron MGP_CBAJ_T0081365.1 MGP_CBAJ_G0031376.1 mouse_genomes_project 7 15771284 15774474 + Slc1a5 protein_coding processed_transcript MGP_CBAJ_T0081366.1 MGP_CBAJ_G0031376.1 mouse_genomes_project 7 15771434 15774238 + Slc1a5 protein_coding retained_intron MGP_CBAJ_T0085056.1 MGP_CBAJ_G0032351.1 mouse_genomes_project 7 115053241 115054189 + MGP_CBAJ_P0085056 protein_coding protein_coding MGP_CBAJ_T0087243.1 MGP_CBAJ_G0032921.1 mouse_genomes_project 7 158094699 158095366 - MGP_CBAJ_P0087243 Gm4559 protein_coding protein_coding MGP_CBAJ_T0011556.1 MGP_CBAJ_G0009694.1 mouse_genomes_project 7 39194664 39194951 - Gm24550 misc_RNA misc_RNA MGP_CBAJ_T0008871.1 MGP_CBAJ_G0007143.1 mouse_genomes_project 7 108784993 108809397 - A630091E08Rik lincRNA lincRNA MGP_CBAJ_T0083762.1 MGP_CBAJ_G0032000.1 mouse_genomes_project 7 69097446 69224083 - MGP_CBAJ_P0083762 Chrna7 protein_coding protein_coding MGP_CBAJ_T0102164.1 MGP_CBAJ_G0040193.1 mouse_genomes_project 7 53329721 53330715 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0002253.1 MGP_CBAJ_G0002167.1 mouse_genomes_project 7 132585912 132588518 + TEC TEC MGP_CBAJ_T0010784.1 MGP_CBAJ_G0008922.1 mouse_genomes_project 7 106321218 106321317 + Mir6394 miRNA miRNA MGP_CBAJ_T0083067.1 MGP_CBAJ_G0031821.1 mouse_genomes_project 7 47563057 47566367 + MGP_CBAJ_P0083067 Klk5 protein_coding protein_coding MGP_CBAJ_T0083068.1 MGP_CBAJ_G0031821.1 mouse_genomes_project 7 47563355 47572378 + MGP_CBAJ_P0083068 Klk5 protein_coding protein_coding MGP_CBAJ_T0100760.1 MGP_CBAJ_G0039015.1 mouse_genomes_project 7 121496837 121496967 + Gm24888 snoRNA snoRNA MGP_CBAJ_T0011554.1 MGP_CBAJ_G0009692.1 mouse_genomes_project 7 26099342 26099449 + Gm23921 misc_RNA misc_RNA MGP_CBAJ_T0101376.1 MGP_CBAJ_G0039446.1 mouse_genomes_project 7 35518396 35541566 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101377.1 MGP_CBAJ_G0039446.1 mouse_genomes_project 7 35518562 35519831 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0082373.1 MGP_CBAJ_G0031658.1 mouse_genomes_project 7 31117230 31139999 - MGP_CBAJ_P0082373 Zfp940 protein_coding protein_coding MGP_CBAJ_T0082374.1 MGP_CBAJ_G0031658.1 mouse_genomes_project 7 31128072 31139971 - Zfp940 protein_coding retained_intron MGP_CBAJ_T0082375.1 MGP_CBAJ_G0031658.1 mouse_genomes_project 7 31128758 31139978 - MGP_CBAJ_P0082375 Zfp940 protein_coding protein_coding MGP_CBAJ_T0082376.1 MGP_CBAJ_G0031658.1 mouse_genomes_project 7 31135773 31139772 - Zfp940 protein_coding processed_transcript MGP_CBAJ_T0082147.1 MGP_CBAJ_G0031600.1 mouse_genomes_project 7 28951458 28954264 - MGP_CBAJ_P0082147 protein_coding protein_coding MGP_CBAJ_T0083013.1 MGP_CBAJ_G0031802.1 mouse_genomes_project 7 47115440 47124385 + MGP_CBAJ_P0083013 Vsig10l protein_coding protein_coding MGP_CBAJ_T0083014.1 MGP_CBAJ_G0031802.1 mouse_genomes_project 7 47115522 47123410 + MGP_CBAJ_P0083014 Vsig10l protein_coding protein_coding MGP_CBAJ_T0083015.1 MGP_CBAJ_G0031802.1 mouse_genomes_project 7 47116966 47117623 + Vsig10l protein_coding retained_intron MGP_CBAJ_T0083016.1 MGP_CBAJ_G0031802.1 mouse_genomes_project 7 47118003 47119968 + Vsig10l protein_coding processed_transcript MGP_CBAJ_T0083017.1 MGP_CBAJ_G0031802.1 mouse_genomes_project 7 47119904 47123365 + MGP_CBAJ_P0083017 Vsig10l protein_coding nonsense_mediated_decay MGP_CBAJ_T0098091.1 MGP_CBAJ_G0036364.1 mouse_genomes_project 7 99538066 99538179 + n-R5s155 rRNA rRNA MGP_CBAJ_T0081195.1 MGP_CBAJ_G0031319.1 mouse_genomes_project 7 11182288 11189140 + MGP_CBAJ_P0081195 Trim28 protein_coding protein_coding MGP_CBAJ_T0081196.1 MGP_CBAJ_G0031319.1 mouse_genomes_project 7 11185720 11187229 + Trim28 protein_coding retained_intron MGP_CBAJ_T0081197.1 MGP_CBAJ_G0031319.1 mouse_genomes_project 7 11185932 11186607 + Trim28 protein_coding retained_intron MGP_CBAJ_T0081198.1 MGP_CBAJ_G0031319.1 mouse_genomes_project 7 11186124 11187704 + Trim28 protein_coding retained_intron MGP_CBAJ_T0081199.1 MGP_CBAJ_G0031319.1 mouse_genomes_project 7 11186509 11187470 + Trim28 protein_coding retained_intron MGP_CBAJ_T0081200.1 MGP_CBAJ_G0031319.1 mouse_genomes_project 7 11186984 11188031 + Trim28 protein_coding retained_intron MGP_CBAJ_T0081201.1 MGP_CBAJ_G0031319.1 mouse_genomes_project 7 11187195 11188100 + Trim28 protein_coding retained_intron MGP_CBAJ_T0081202.1 MGP_CBAJ_G0031319.1 mouse_genomes_project 7 11187808 11188452 + Trim28 protein_coding retained_intron MGP_CBAJ_T0081203.1 MGP_CBAJ_G0031319.1 mouse_genomes_project 7 11188476 11189137 + Trim28 protein_coding retained_intron MGP_CBAJ_T0008921.1 MGP_CBAJ_G0007175.1 mouse_genomes_project 7 140973295 140977084 - lincRNA lincRNA MGP_CBAJ_T0008922.1 MGP_CBAJ_G0007175.1 mouse_genomes_project 7 140974198 140977672 - lincRNA lincRNA MGP_CBAJ_T0008923.1 MGP_CBAJ_G0007175.1 mouse_genomes_project 7 140974198 140977411 - lincRNA lincRNA MGP_CBAJ_T0008924.1 MGP_CBAJ_G0007175.1 mouse_genomes_project 7 140974198 140977393 - lincRNA lincRNA MGP_CBAJ_T0008925.1 MGP_CBAJ_G0007175.1 mouse_genomes_project 7 140974199 140977362 - lincRNA lincRNA MGP_CBAJ_T0008926.1 MGP_CBAJ_G0007175.1 mouse_genomes_project 7 140974200 140977420 - lincRNA lincRNA MGP_CBAJ_T0008927.1 MGP_CBAJ_G0007175.1 mouse_genomes_project 7 140976427 140977626 - lincRNA lincRNA MGP_CBAJ_T0082526.1 MGP_CBAJ_G0031697.1 mouse_genomes_project 7 31981861 31986478 - MGP_CBAJ_P0082526 Psenen protein_coding protein_coding MGP_CBAJ_T0008932.1 MGP_CBAJ_G0007179.1 mouse_genomes_project 7 141850814 141861376 + Gm44514 lincRNA lincRNA MGP_CBAJ_T0008933.1 MGP_CBAJ_G0007179.1 mouse_genomes_project 7 141858249 141861986 + Gm44514 lincRNA lincRNA MGP_CBAJ_T0084976.1 MGP_CBAJ_G0032275.1 mouse_genomes_project 7 113292409 113332423 + MGP_CBAJ_P0084976 Rrm1 protein_coding protein_coding MGP_CBAJ_T0102049.1 MGP_CBAJ_G0040079.1 mouse_genomes_project 7 7881665 7897516 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0086633.1 MGP_CBAJ_G0032761.1 mouse_genomes_project 7 144905733 145039358 - MGP_CBAJ_P0086633 Ate1 protein_coding unknown_likely_coding MGP_CBAJ_T0086634.1 MGP_CBAJ_G0032761.1 mouse_genomes_project 7 144905773 145039436 - MGP_CBAJ_P0086634 Ate1 protein_coding protein_coding MGP_CBAJ_T0086635.1 MGP_CBAJ_G0032761.1 mouse_genomes_project 7 144905773 145039427 - MGP_CBAJ_P0086635 Ate1 protein_coding protein_coding MGP_CBAJ_T0086636.1 MGP_CBAJ_G0032761.1 mouse_genomes_project 7 144908805 145039858 - MGP_CBAJ_P0086636 Ate1 protein_coding protein_coding MGP_CBAJ_T0086637.1 MGP_CBAJ_G0032761.1 mouse_genomes_project 7 144908805 145039858 - MGP_CBAJ_P0086637 Ate1 protein_coding protein_coding MGP_CBAJ_T0083507.1 MGP_CBAJ_G0031932.1 mouse_genomes_project 7 50463116 50511873 - MGP_CBAJ_P0083507 Ush1c protein_coding protein_coding MGP_CBAJ_T0083508.1 MGP_CBAJ_G0031932.1 mouse_genomes_project 7 50463123 50511884 - MGP_CBAJ_P0083508 Ush1c protein_coding protein_coding MGP_CBAJ_T0083509.1 MGP_CBAJ_G0031932.1 mouse_genomes_project 7 50463123 50511871 - MGP_CBAJ_P0083509 Ush1c protein_coding nonsense_mediated_decay MGP_CBAJ_T0083510.1 MGP_CBAJ_G0031932.1 mouse_genomes_project 7 50463397 50511845 - MGP_CBAJ_P0083510 Ush1c protein_coding protein_coding MGP_CBAJ_T0083511.1 MGP_CBAJ_G0031932.1 mouse_genomes_project 7 50463416 50511879 - MGP_CBAJ_P0083511 Ush1c protein_coding protein_coding MGP_CBAJ_T0083512.1 MGP_CBAJ_G0031932.1 mouse_genomes_project 7 50463417 50503689 - MGP_CBAJ_P0083512 Ush1c protein_coding protein_coding MGP_CBAJ_T0083513.1 MGP_CBAJ_G0031932.1 mouse_genomes_project 7 50463436 50472087 - Ush1c protein_coding retained_intron MGP_CBAJ_T0083514.1 MGP_CBAJ_G0031932.1 mouse_genomes_project 7 50471356 50493142 - Ush1c protein_coding processed_transcript MGP_CBAJ_T0085791.1 MGP_CBAJ_G0032612.1 mouse_genomes_project 7 134383087 134477567 + MGP_CBAJ_P0085791 Otoa protein_coding protein_coding MGP_CBAJ_T0085792.1 MGP_CBAJ_G0032612.1 mouse_genomes_project 7 134383173 134403771 + MGP_CBAJ_P0085792 Otoa protein_coding protein_coding MGP_CBAJ_T0085793.1 MGP_CBAJ_G0032612.1 mouse_genomes_project 7 134383189 134391343 + MGP_CBAJ_P0085793 Otoa protein_coding protein_coding MGP_CBAJ_T0085794.1 MGP_CBAJ_G0032612.1 mouse_genomes_project 7 134383189 134391325 + MGP_CBAJ_P0085794 Otoa protein_coding protein_coding MGP_CBAJ_T0085795.1 MGP_CBAJ_G0032612.1 mouse_genomes_project 7 134419440 134471479 + Otoa protein_coding retained_intron MGP_CBAJ_T0085796.1 MGP_CBAJ_G0032612.1 mouse_genomes_project 7 134419445 134477561 + Otoa protein_coding processed_transcript MGP_CBAJ_T0082756.1 MGP_CBAJ_G0031744.1 mouse_genomes_project 7 36194903 36225224 - MGP_CBAJ_P0082756 Uba2 protein_coding protein_coding MGP_CBAJ_T0082757.1 MGP_CBAJ_G0031744.1 mouse_genomes_project 7 36194929 36196302 - Uba2 protein_coding retained_intron MGP_CBAJ_T0082758.1 MGP_CBAJ_G0031744.1 mouse_genomes_project 7 36195298 36198764 - MGP_CBAJ_P0082758 Uba2 protein_coding protein_coding MGP_CBAJ_T0082759.1 MGP_CBAJ_G0031744.1 mouse_genomes_project 7 36195605 36197485 - Uba2 protein_coding retained_intron MGP_CBAJ_T0082760.1 MGP_CBAJ_G0031744.1 mouse_genomes_project 7 36196644 36200500 - Uba2 protein_coding retained_intron MGP_CBAJ_T0082761.1 MGP_CBAJ_G0031744.1 mouse_genomes_project 7 36208014 36218369 - MGP_CBAJ_P0082761 Uba2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082762.1 MGP_CBAJ_G0031744.1 mouse_genomes_project 7 36211017 36214131 - Uba2 protein_coding retained_intron MGP_CBAJ_T0082763.1 MGP_CBAJ_G0031744.1 mouse_genomes_project 7 36211657 36221067 - MGP_CBAJ_P0082763 Uba2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082764.1 MGP_CBAJ_G0031744.1 mouse_genomes_project 7 36218315 36226248 - MGP_CBAJ_P0082764 Uba2 protein_coding protein_coding MGP_CBAJ_T0082765.1 MGP_CBAJ_G0031744.1 mouse_genomes_project 7 36219649 36220990 - Uba2 protein_coding retained_intron MGP_CBAJ_T0099513.1 MGP_CBAJ_G0037768.1 mouse_genomes_project 7 122014441 122014495 + Gm24842 snRNA snRNA MGP_CBAJ_T0002244.1 MGP_CBAJ_G0002158.1 mouse_genomes_project 7 88117133 88118974 - TEC TEC MGP_CBAJ_T0002205.1 MGP_CBAJ_G0002120.1 mouse_genomes_project 7 70376435 70376588 + TEC TEC MGP_CBAJ_T0015502.1 MGP_CBAJ_G0013614.1 mouse_genomes_project 7 17237859 17238558 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015562.1 MGP_CBAJ_G0013674.1 mouse_genomes_project 7 44855492 44856142 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0084986.1 MGP_CBAJ_G0032284.1 mouse_genomes_project 7 113475615 113476569 + MGP_CBAJ_P0084986 Olfr552 protein_coding protein_coding MGP_CBAJ_T0086685.1 MGP_CBAJ_G0032775.1 mouse_genomes_project 7 146117000 146152419 + MGP_CBAJ_P0086685 Acadsb protein_coding protein_coding MGP_CBAJ_T0086686.1 MGP_CBAJ_G0032775.1 mouse_genomes_project 7 146117102 146150971 + MGP_CBAJ_P0086686 Acadsb protein_coding protein_coding MGP_CBAJ_T0086687.1 MGP_CBAJ_G0032775.1 mouse_genomes_project 7 146130254 146135808 + Acadsb protein_coding retained_intron MGP_CBAJ_T0086688.1 MGP_CBAJ_G0032775.1 mouse_genomes_project 7 146130289 146134608 + Acadsb protein_coding retained_intron MGP_CBAJ_T0086689.1 MGP_CBAJ_G0032775.1 mouse_genomes_project 7 146134401 146137960 + Acadsb protein_coding retained_intron MGP_CBAJ_T0086690.1 MGP_CBAJ_G0032775.1 mouse_genomes_project 7 146135628 146152417 + Acadsb protein_coding retained_intron MGP_CBAJ_T0086691.1 MGP_CBAJ_G0032775.1 mouse_genomes_project 7 146140063 146143264 + Acadsb protein_coding retained_intron MGP_CBAJ_T0002204.1 MGP_CBAJ_G0002119.1 mouse_genomes_project 7 70361215 70361651 - TEC TEC MGP_CBAJ_T0081582.1 MGP_CBAJ_G0031443.1 mouse_genomes_project 7 18958168 18990959 - MGP_CBAJ_P0081582 Mark4 protein_coding unknown_likely_coding MGP_CBAJ_T0081583.1 MGP_CBAJ_G0031443.1 mouse_genomes_project 7 18959110 18990959 - MGP_CBAJ_P0081583 Mark4 protein_coding protein_coding MGP_CBAJ_T0102047.1 MGP_CBAJ_G0040077.1 mouse_genomes_project 7 243826 244670 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081679.1 MGP_CBAJ_G0031479.1 mouse_genomes_project 7 23772353 23773325 + MGP_CBAJ_P0081679 Vmn1r179 protein_coding protein_coding MGP_CBAJ_T0084865.1 MGP_CBAJ_G0032254.1 mouse_genomes_project 7 112543598 112548022 + MGP_CBAJ_P0084865 Phox2a protein_coding protein_coding MGP_CBAJ_T0085656.1 MGP_CBAJ_G0032575.1 mouse_genomes_project 7 131760136 131878957 + MGP_CBAJ_P0085656 9030624J02Rik protein_coding protein_coding MGP_CBAJ_T0085657.1 MGP_CBAJ_G0032575.1 mouse_genomes_project 7 131760595 131808780 + 9030624J02Rik protein_coding processed_transcript MGP_CBAJ_T0085658.1 MGP_CBAJ_G0032575.1 mouse_genomes_project 7 131760610 131877481 + MGP_CBAJ_P0085658 9030624J02Rik protein_coding protein_coding MGP_CBAJ_T0085659.1 MGP_CBAJ_G0032575.1 mouse_genomes_project 7 131760610 131877471 + MGP_CBAJ_P0085659 9030624J02Rik protein_coding protein_coding MGP_CBAJ_T0085660.1 MGP_CBAJ_G0032575.1 mouse_genomes_project 7 131760610 131784544 + MGP_CBAJ_P0085660 9030624J02Rik protein_coding protein_coding MGP_CBAJ_T0085661.1 MGP_CBAJ_G0032575.1 mouse_genomes_project 7 131760612 131768302 + 9030624J02Rik protein_coding retained_intron MGP_CBAJ_T0085662.1 MGP_CBAJ_G0032575.1 mouse_genomes_project 7 131768533 131788819 + 9030624J02Rik protein_coding retained_intron MGP_CBAJ_T0085663.1 MGP_CBAJ_G0032575.1 mouse_genomes_project 7 131772755 131774311 + 9030624J02Rik protein_coding retained_intron MGP_CBAJ_T0085664.1 MGP_CBAJ_G0032575.1 mouse_genomes_project 7 131786507 131877479 + MGP_CBAJ_P0085664 9030624J02Rik protein_coding protein_coding MGP_CBAJ_T0085665.1 MGP_CBAJ_G0032575.1 mouse_genomes_project 7 131819598 131859627 + MGP_CBAJ_P0085665 9030624J02Rik protein_coding protein_coding MGP_CBAJ_T0085666.1 MGP_CBAJ_G0032575.1 mouse_genomes_project 7 131831847 131870014 + 9030624J02Rik protein_coding retained_intron MGP_CBAJ_T0085667.1 MGP_CBAJ_G0032575.1 mouse_genomes_project 7 131834468 131843198 + 9030624J02Rik protein_coding retained_intron MGP_CBAJ_T0085668.1 MGP_CBAJ_G0032575.1 mouse_genomes_project 7 131855151 131859851 + 9030624J02Rik protein_coding retained_intron MGP_CBAJ_T0085669.1 MGP_CBAJ_G0032575.1 mouse_genomes_project 7 131858084 131877291 + 9030624J02Rik protein_coding processed_transcript MGP_CBAJ_T0015551.1 MGP_CBAJ_G0013663.1 mouse_genomes_project 7 42611563 42612106 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015629.1 MGP_CBAJ_G0013741.1 mouse_genomes_project 7 94505378 94505955 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0084495.1 MGP_CBAJ_G0032173.1 mouse_genomes_project 7 99685829 99688178 + MGP_CBAJ_P0084495 Ccdc89 protein_coding protein_coding MGP_CBAJ_T0086864.1 MGP_CBAJ_G0032820.1 mouse_genomes_project 7 154795401 155007519 + MGP_CBAJ_P0086864 Inpp5a protein_coding protein_coding MGP_CBAJ_T0086865.1 MGP_CBAJ_G0032820.1 mouse_genomes_project 7 154795402 155007519 + MGP_CBAJ_P0086865 Inpp5a protein_coding protein_coding MGP_CBAJ_T0086866.1 MGP_CBAJ_G0032820.1 mouse_genomes_project 7 154809658 155007092 + MGP_CBAJ_P0086866 Inpp5a protein_coding protein_coding MGP_CBAJ_T0086867.1 MGP_CBAJ_G0032820.1 mouse_genomes_project 7 154876271 154934961 + Inpp5a protein_coding processed_transcript MGP_CBAJ_T0086868.1 MGP_CBAJ_G0032820.1 mouse_genomes_project 7 154903607 154919886 + Inpp5a protein_coding processed_transcript MGP_CBAJ_T0086869.1 MGP_CBAJ_G0032820.1 mouse_genomes_project 7 154947361 155003076 + Inpp5a protein_coding processed_transcript MGP_CBAJ_T0008766.1 MGP_CBAJ_G0007070.1 mouse_genomes_project 7 47354926 47355400 - Gm44819 lincRNA lincRNA MGP_CBAJ_T0015590.1 MGP_CBAJ_G0013702.1 mouse_genomes_project 7 61328193 61328903 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0087388.1 MGP_CBAJ_G0032946.1 mouse_genomes_project 7 159490494 159542005 - MGP_CBAJ_P0087388 Cars protein_coding protein_coding MGP_CBAJ_T0087389.1 MGP_CBAJ_G0032946.1 mouse_genomes_project 7 159490971 159541971 - MGP_CBAJ_P0087389 Cars protein_coding protein_coding MGP_CBAJ_T0087390.1 MGP_CBAJ_G0032946.1 mouse_genomes_project 7 159499349 159507690 - Cars protein_coding processed_transcript MGP_CBAJ_T0087391.1 MGP_CBAJ_G0032946.1 mouse_genomes_project 7 159502195 159508456 - Cars protein_coding retained_intron MGP_CBAJ_T0087392.1 MGP_CBAJ_G0032946.1 mouse_genomes_project 7 159508266 159509533 - Cars protein_coding processed_transcript MGP_CBAJ_T0087393.1 MGP_CBAJ_G0032946.1 mouse_genomes_project 7 159509381 159513947 - Cars protein_coding retained_intron MGP_CBAJ_T0087394.1 MGP_CBAJ_G0032946.1 mouse_genomes_project 7 159527666 159538665 - Cars protein_coding processed_transcript MGP_CBAJ_T0087395.1 MGP_CBAJ_G0032946.1 mouse_genomes_project 7 159529067 159541596 - Cars protein_coding processed_transcript MGP_CBAJ_T0087396.1 MGP_CBAJ_G0032946.1 mouse_genomes_project 7 159534342 159541946 - Cars protein_coding processed_transcript MGP_CBAJ_T0085500.1 MGP_CBAJ_G0032543.1 mouse_genomes_project 7 125291858 125295374 + MGP_CBAJ_P0085500 Rassf10 protein_coding protein_coding MGP_CBAJ_T0015640.1 MGP_CBAJ_G0013752.1 mouse_genomes_project 7 105887733 105888357 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010749.1 MGP_CBAJ_G0008887.1 mouse_genomes_project 7 59105023 59105152 - Mir6238 miRNA miRNA MGP_CBAJ_T0010707.1 MGP_CBAJ_G0008845.1 mouse_genomes_project 7 438106 438197 + Gm23450 miRNA miRNA MGP_CBAJ_T0081117.1 MGP_CBAJ_G0031280.1 mouse_genomes_project 7 7837400 7855825 - MGP_CBAJ_P0081117 protein_coding protein_coding MGP_CBAJ_T0080981.1 MGP_CBAJ_G0031219.1 mouse_genomes_project 7 1944349 1945581 - MGP_CBAJ_P0080981 Cox6b2 protein_coding protein_coding MGP_CBAJ_T0080982.1 MGP_CBAJ_G0031219.1 mouse_genomes_project 7 1944349 1945530 - MGP_CBAJ_P0080982 Cox6b2 protein_coding protein_coding MGP_CBAJ_T0080983.1 MGP_CBAJ_G0031219.1 mouse_genomes_project 7 1944349 1945652 - MGP_CBAJ_P0080983 Cox6b2 protein_coding protein_coding MGP_CBAJ_T0080984.1 MGP_CBAJ_G0031219.1 mouse_genomes_project 7 1944349 1945581 - MGP_CBAJ_P0080984 Cox6b2 protein_coding protein_coding MGP_CBAJ_T0080985.1 MGP_CBAJ_G0031219.1 mouse_genomes_project 7 1944351 1945567 - MGP_CBAJ_P0080985 Cox6b2 protein_coding protein_coding MGP_CBAJ_T0080986.1 MGP_CBAJ_G0031219.1 mouse_genomes_project 7 1944352 1945581 - MGP_CBAJ_P0080986 Cox6b2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080987.1 MGP_CBAJ_G0031219.1 mouse_genomes_project 7 1944412 1945596 - MGP_CBAJ_P0080987 Cox6b2 protein_coding protein_coding MGP_CBAJ_T0080988.1 MGP_CBAJ_G0031219.1 mouse_genomes_project 7 1944482 1945086 - Cox6b2 protein_coding retained_intron MGP_CBAJ_T0080989.1 MGP_CBAJ_G0031219.1 mouse_genomes_project 7 1944504 1945560 - MGP_CBAJ_P0080989 Cox6b2 protein_coding protein_coding MGP_CBAJ_T0018148.1 MGP_CBAJ_G0015426.1 mouse_genomes_project 7 121395570 121401848 + 1700095J03Rik processed_transcript processed_transcript MGP_CBAJ_T0008928.1 MGP_CBAJ_G0007176.1 mouse_genomes_project 7 141078693 141084080 + lincRNA lincRNA MGP_CBAJ_T0085323.1 MGP_CBAJ_G0032494.1 mouse_genomes_project 7 120480210 120481218 + MGP_CBAJ_P0085323 Olfr506 protein_coding protein_coding MGP_CBAJ_T0083062.1 MGP_CBAJ_G0031819.1 mouse_genomes_project 7 47527153 47535267 + MGP_CBAJ_P0083062 Klk7 protein_coding protein_coding MGP_CBAJ_T0005079.1 MGP_CBAJ_G0004321.1 mouse_genomes_project 7 19429186 19431451 + Gm16175 antisense antisense MGP_CBAJ_T0081665.1 MGP_CBAJ_G0031468.1 mouse_genomes_project 7 19609844 19610639 + MGP_CBAJ_P0081665 protein_coding protein_coding MGP_CBAJ_T0015498.1 MGP_CBAJ_G0013610.1 mouse_genomes_project 7 16188915 16189509 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010715.1 MGP_CBAJ_G0008853.1 mouse_genomes_project 7 10433534 10433644 - Gm23521 miRNA miRNA MGP_CBAJ_T0082599.1 MGP_CBAJ_G0031711.1 mouse_genomes_project 7 32155230 32159972 - MGP_CBAJ_P0082599 Gapdhs protein_coding nonsense_mediated_decay MGP_CBAJ_T0082600.1 MGP_CBAJ_G0031711.1 mouse_genomes_project 7 32155235 32171404 - MGP_CBAJ_P0082600 Gapdhs protein_coding protein_coding MGP_CBAJ_T0082601.1 MGP_CBAJ_G0031711.1 mouse_genomes_project 7 32155342 32171428 - MGP_CBAJ_P0082601 Gapdhs protein_coding protein_coding MGP_CBAJ_T0083423.1 MGP_CBAJ_G0031909.1 mouse_genomes_project 7 49840301 49857015 - MGP_CBAJ_P0083423 Sec1 protein_coding protein_coding MGP_CBAJ_T0002276.1 MGP_CBAJ_G0002190.1 mouse_genomes_project 7 142101378 142102087 + TEC TEC MGP_CBAJ_T0099526.1 MGP_CBAJ_G0037781.1 mouse_genomes_project 7 141092521 141092628 + Gm22747 snRNA snRNA MGP_CBAJ_T0015490.1 MGP_CBAJ_G0013602.1 mouse_genomes_project 7 12700505 12706199 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0082003.1 MGP_CBAJ_G0031567.1 mouse_genomes_project 7 27787538 27794928 + MGP_CBAJ_P0082003 Cyp2t4 protein_coding protein_coding MGP_CBAJ_T0082004.1 MGP_CBAJ_G0031567.1 mouse_genomes_project 7 27791492 27795032 + MGP_CBAJ_P0082004 Cyp2t4 protein_coding protein_coding MGP_CBAJ_T0010785.1 MGP_CBAJ_G0008923.1 mouse_genomes_project 7 109920370 109920465 + Mir326 miRNA miRNA MGP_CBAJ_T0102160.1 MGP_CBAJ_G0040189.1 mouse_genomes_project 7 52880833 52881818 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0005223.1 MGP_CBAJ_G0004426.1 mouse_genomes_project 7 147357870 147360121 + Gm16764 antisense antisense MGP_CBAJ_T0005224.1 MGP_CBAJ_G0004426.1 mouse_genomes_project 7 147357870 147360121 + Gm16764 antisense antisense MGP_CBAJ_T0005225.1 MGP_CBAJ_G0004426.1 mouse_genomes_project 7 147357886 147360121 + Gm16764 antisense antisense MGP_CBAJ_T0086322.1 MGP_CBAJ_G0032710.1 mouse_genomes_project 7 141592415 141598804 + MGP_CBAJ_P0086322 Prr14 protein_coding protein_coding MGP_CBAJ_T0086323.1 MGP_CBAJ_G0032710.1 mouse_genomes_project 7 141593063 141595899 + MGP_CBAJ_P0086323 Prr14 protein_coding protein_coding MGP_CBAJ_T0086324.1 MGP_CBAJ_G0032710.1 mouse_genomes_project 7 141593073 141595762 + MGP_CBAJ_P0086324 Prr14 protein_coding protein_coding MGP_CBAJ_T0086325.1 MGP_CBAJ_G0032710.1 mouse_genomes_project 7 141593096 141595870 + Prr14 protein_coding retained_intron MGP_CBAJ_T0086326.1 MGP_CBAJ_G0032710.1 mouse_genomes_project 7 141593493 141595149 + Prr14 protein_coding retained_intron MGP_CBAJ_T0086327.1 MGP_CBAJ_G0032710.1 mouse_genomes_project 7 141593534 141598803 + MGP_CBAJ_P0086327 Prr14 protein_coding protein_coding MGP_CBAJ_T0086328.1 MGP_CBAJ_G0032710.1 mouse_genomes_project 7 141593945 141597257 + Prr14 protein_coding retained_intron MGP_CBAJ_T0086329.1 MGP_CBAJ_G0032710.1 mouse_genomes_project 7 141595667 141597315 + MGP_CBAJ_P0086329 Prr14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086330.1 MGP_CBAJ_G0032710.1 mouse_genomes_project 7 141597545 141598802 + Prr14 protein_coding retained_intron MGP_CBAJ_T0086331.1 MGP_CBAJ_G0032710.1 mouse_genomes_project 7 141597563 141598800 + MGP_CBAJ_P0086331 Prr14 protein_coding protein_coding MGP_CBAJ_T0015528.1 MGP_CBAJ_G0013640.1 mouse_genomes_project 7 28714752 28716458 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0087465.1 MGP_CBAJ_G0032964.1 mouse_genomes_project 7 161008630 161024251 + MGP_CBAJ_P0087465 Oraov1 protein_coding protein_coding MGP_CBAJ_T0087466.1 MGP_CBAJ_G0032964.1 mouse_genomes_project 7 161008667 161014644 + MGP_CBAJ_P0087466 Oraov1 protein_coding protein_coding MGP_CBAJ_T0087467.1 MGP_CBAJ_G0032964.1 mouse_genomes_project 7 161008703 161011234 + Oraov1 protein_coding retained_intron MGP_CBAJ_T0087468.1 MGP_CBAJ_G0032964.1 mouse_genomes_project 7 161008705 161009990 + Oraov1 protein_coding processed_transcript MGP_CBAJ_T0087469.1 MGP_CBAJ_G0032964.1 mouse_genomes_project 7 161008712 161022989 + MGP_CBAJ_P0087469 Oraov1 protein_coding protein_coding MGP_CBAJ_T0087470.1 MGP_CBAJ_G0032964.1 mouse_genomes_project 7 161009668 161013339 + Oraov1 protein_coding retained_intron MGP_CBAJ_T0084384.1 MGP_CBAJ_G0032121.1 mouse_genomes_project 7 92233307 92234359 + MGP_CBAJ_P0084384 protein_coding protein_coding MGP_CBAJ_T0011550.1 MGP_CBAJ_G0009688.1 mouse_genomes_project 7 4299729 4300027 - Gm22649 misc_RNA misc_RNA MGP_CBAJ_T0085741.1 MGP_CBAJ_G0032597.1 mouse_genomes_project 7 133365694 133383918 - MGP_CBAJ_P0085741 Crym protein_coding protein_coding MGP_CBAJ_T0085742.1 MGP_CBAJ_G0032597.1 mouse_genomes_project 7 133376458 133383918 - Crym protein_coding retained_intron MGP_CBAJ_T0086292.1 MGP_CBAJ_G0032698.1 mouse_genomes_project 7 141279409 141284528 + MGP_CBAJ_P0086292 Zfp553 protein_coding protein_coding MGP_CBAJ_T0086293.1 MGP_CBAJ_G0032698.1 mouse_genomes_project 7 141279603 141284392 + MGP_CBAJ_P0086293 Zfp553 protein_coding protein_coding MGP_CBAJ_T0086294.1 MGP_CBAJ_G0032698.1 mouse_genomes_project 7 141279642 141280469 + Zfp553 protein_coding retained_intron MGP_CBAJ_T0081216.1 MGP_CBAJ_G0031323.1 mouse_genomes_project 7 11251263 11252190 - MGP_CBAJ_P0081216 Vmn1r85 protein_coding protein_coding MGP_CBAJ_T0015519.1 MGP_CBAJ_G0013631.1 mouse_genomes_project 7 26105721 26106073 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0085610.1 MGP_CBAJ_G0032564.1 mouse_genomes_project 7 130214883 130495607 + Xylt1 protein_coding retained_intron MGP_CBAJ_T0085611.1 MGP_CBAJ_G0032564.1 mouse_genomes_project 7 130214883 130536510 + MGP_CBAJ_P0085611 Xylt1 protein_coding protein_coding MGP_CBAJ_T0085612.1 MGP_CBAJ_G0032564.1 mouse_genomes_project 7 130328578 130405555 + Xylt1 protein_coding retained_intron MGP_CBAJ_T0082584.1 MGP_CBAJ_G0031706.1 mouse_genomes_project 7 32084658 32095873 - MGP_CBAJ_P0082584 Haus5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082585.1 MGP_CBAJ_G0031706.1 mouse_genomes_project 7 32084663 32095934 - MGP_CBAJ_P0082585 Haus5 protein_coding protein_coding MGP_CBAJ_T0082586.1 MGP_CBAJ_G0031706.1 mouse_genomes_project 7 32084885 32087951 - Haus5 protein_coding retained_intron MGP_CBAJ_T0082587.1 MGP_CBAJ_G0031706.1 mouse_genomes_project 7 32088507 32089910 - Haus5 protein_coding retained_intron MGP_CBAJ_T0082588.1 MGP_CBAJ_G0031706.1 mouse_genomes_project 7 32089035 32095900 - Haus5 protein_coding retained_intron MGP_CBAJ_T0082589.1 MGP_CBAJ_G0031706.1 mouse_genomes_project 7 32089794 32091803 - Haus5 protein_coding retained_intron MGP_CBAJ_T0085342.1 MGP_CBAJ_G0032509.1 mouse_genomes_project 7 120957848 121009367 - MGP_CBAJ_P0085342 Ric3 protein_coding protein_coding MGP_CBAJ_T0085343.1 MGP_CBAJ_G0032509.1 mouse_genomes_project 7 120957848 120981738 - MGP_CBAJ_P0085343 Ric3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085344.1 MGP_CBAJ_G0032509.1 mouse_genomes_project 7 120961484 121009358 - MGP_CBAJ_P0085344 Ric3 protein_coding protein_coding MGP_CBAJ_T0085345.1 MGP_CBAJ_G0032509.1 mouse_genomes_project 7 120969553 121009347 - Ric3 protein_coding retained_intron MGP_CBAJ_T0085346.1 MGP_CBAJ_G0032509.1 mouse_genomes_project 7 120981400 121009358 - Ric3 protein_coding retained_intron MGP_CBAJ_T0085347.1 MGP_CBAJ_G0032509.1 mouse_genomes_project 7 121006779 121009341 - Ric3 protein_coding processed_transcript MGP_CBAJ_T0008805.1 MGP_CBAJ_G0007100.1 mouse_genomes_project 7 78934032 79004008 + 1700011C11Rik lincRNA lincRNA MGP_CBAJ_T0083069.1 MGP_CBAJ_G0031822.1 mouse_genomes_project 7 47607179 47611824 + MGP_CBAJ_P0083069 Klk4 protein_coding protein_coding MGP_CBAJ_T0015472.1 MGP_CBAJ_G0013584.1 mouse_genomes_project 7 10262814 10263469 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0081055.1 MGP_CBAJ_G0031251.1 mouse_genomes_project 7 3165054 3166501 - MGP_CBAJ_P0081055 Vmn1r56 protein_coding protein_coding MGP_CBAJ_T0008901.1 MGP_CBAJ_G0007160.1 mouse_genomes_project 7 130046755 130099776 + Gm45152 lincRNA lincRNA MGP_CBAJ_T0082810.1 MGP_CBAJ_G0031752.1 mouse_genomes_project 7 37082811 37232680 + MGP_CBAJ_P0082810 Pepd protein_coding protein_coding MGP_CBAJ_T0082811.1 MGP_CBAJ_G0031752.1 mouse_genomes_project 7 37121494 37207193 + MGP_CBAJ_P0082811 Pepd protein_coding nonsense_mediated_decay MGP_CBAJ_T0082812.1 MGP_CBAJ_G0031752.1 mouse_genomes_project 7 37154779 37228706 + Pepd protein_coding retained_intron MGP_CBAJ_T0082813.1 MGP_CBAJ_G0031752.1 mouse_genomes_project 7 37155006 37166291 + Pepd protein_coding retained_intron MGP_CBAJ_T0082814.1 MGP_CBAJ_G0031752.1 mouse_genomes_project 7 37228453 37232679 + Pepd protein_coding retained_intron MGP_CBAJ_T0082815.1 MGP_CBAJ_G0031752.1 mouse_genomes_project 7 37231161 37232506 + Pepd protein_coding retained_intron MGP_CBAJ_T0082336.1 MGP_CBAJ_G0031651.1 mouse_genomes_project 7 30477571 30482295 + MGP_CBAJ_P0082336 Ppp1r14a protein_coding protein_coding MGP_CBAJ_T0010804.1 MGP_CBAJ_G0008942.1 mouse_genomes_project 7 148850368 148850475 - Gm23631 miRNA miRNA MGP_CBAJ_T0102209.1 MGP_CBAJ_G0040238.1 mouse_genomes_project 7 115172181 115173087 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015514.1 MGP_CBAJ_G0013626.1 mouse_genomes_project 7 25609138 25610090 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015688.1 MGP_CBAJ_G0013800.1 mouse_genomes_project 7 140713674 140713903 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0086153.1 MGP_CBAJ_G0032674.1 mouse_genomes_project 7 140840459 140842569 + MGP_CBAJ_P0086153 Doc2a protein_coding protein_coding MGP_CBAJ_T0086154.1 MGP_CBAJ_G0032674.1 mouse_genomes_project 7 140840596 140845749 + MGP_CBAJ_P0086154 Doc2a protein_coding protein_coding MGP_CBAJ_T0086155.1 MGP_CBAJ_G0032674.1 mouse_genomes_project 7 140840681 140841796 + Doc2a protein_coding processed_transcript MGP_CBAJ_T0086156.1 MGP_CBAJ_G0032674.1 mouse_genomes_project 7 140840741 140841736 + MGP_CBAJ_P0086156 Doc2a protein_coding protein_coding MGP_CBAJ_T0086157.1 MGP_CBAJ_G0032674.1 mouse_genomes_project 7 140840769 140844383 + MGP_CBAJ_P0086157 Doc2a protein_coding protein_coding MGP_CBAJ_T0086158.1 MGP_CBAJ_G0032674.1 mouse_genomes_project 7 140840970 140841880 + MGP_CBAJ_P0086158 Doc2a protein_coding protein_coding MGP_CBAJ_T0086159.1 MGP_CBAJ_G0032674.1 mouse_genomes_project 7 140841005 140841879 + MGP_CBAJ_P0086159 Doc2a protein_coding protein_coding MGP_CBAJ_T0086160.1 MGP_CBAJ_G0032674.1 mouse_genomes_project 7 140841298 140842804 + MGP_CBAJ_P0086160 Doc2a protein_coding protein_coding MGP_CBAJ_T0086161.1 MGP_CBAJ_G0032674.1 mouse_genomes_project 7 140841840 140845080 + MGP_CBAJ_P0086161 Doc2a protein_coding nonsense_mediated_decay MGP_CBAJ_T0015496.1 MGP_CBAJ_G0013608.1 mouse_genomes_project 7 15649790 15650343 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015549.1 MGP_CBAJ_G0013661.1 mouse_genomes_project 7 42427821 42428415 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0086773.1 MGP_CBAJ_G0032794.1 mouse_genomes_project 7 148581475 148592769 + MGP_CBAJ_P0086773 Bccip protein_coding protein_coding MGP_CBAJ_T0086774.1 MGP_CBAJ_G0032794.1 mouse_genomes_project 7 148581490 148587070 + Bccip protein_coding retained_intron MGP_CBAJ_T0086775.1 MGP_CBAJ_G0032794.1 mouse_genomes_project 7 148581544 148585937 + Bccip protein_coding processed_transcript MGP_CBAJ_T0086776.1 MGP_CBAJ_G0032794.1 mouse_genomes_project 7 148586365 148592565 + Bccip protein_coding processed_transcript MGP_CBAJ_T0086777.1 MGP_CBAJ_G0032794.1 mouse_genomes_project 7 148589002 148590839 + Bccip protein_coding retained_intron MGP_CBAJ_T0008802.1 MGP_CBAJ_G0007097.1 mouse_genomes_project 7 78249150 78258616 + lincRNA lincRNA MGP_CBAJ_T0085112.1 MGP_CBAJ_G0032381.1 mouse_genomes_project 7 115644990 115651100 - MGP_CBAJ_P0085112 protein_coding protein_coding MGP_CBAJ_T0081854.1 MGP_CBAJ_G0031527.1 mouse_genomes_project 7 25364737 25374331 - MGP_CBAJ_P0081854 Gsk3a protein_coding protein_coding MGP_CBAJ_T0081855.1 MGP_CBAJ_G0031527.1 mouse_genomes_project 7 25364737 25374331 - MGP_CBAJ_P0081855 Gsk3a protein_coding protein_coding MGP_CBAJ_T0081856.1 MGP_CBAJ_G0031527.1 mouse_genomes_project 7 25365944 25367724 - Gsk3a protein_coding retained_intron MGP_CBAJ_T0002174.1 MGP_CBAJ_G0002089.1 mouse_genomes_project 7 39176673 39178215 + TEC TEC MGP_CBAJ_T0080919.1 MGP_CBAJ_G0031208.1 mouse_genomes_project 7 1653546 1664790 - MGP_CBAJ_P0080919 Tnnt1 protein_coding protein_coding MGP_CBAJ_T0080920.1 MGP_CBAJ_G0031208.1 mouse_genomes_project 7 1653546 1664761 - MGP_CBAJ_P0080920 Tnnt1 protein_coding protein_coding MGP_CBAJ_T0080921.1 MGP_CBAJ_G0031208.1 mouse_genomes_project 7 1653639 1664745 - MGP_CBAJ_P0080921 Tnnt1 protein_coding protein_coding MGP_CBAJ_T0080922.1 MGP_CBAJ_G0031208.1 mouse_genomes_project 7 1653639 1664761 - MGP_CBAJ_P0080922 Tnnt1 protein_coding protein_coding MGP_CBAJ_T0080923.1 MGP_CBAJ_G0031208.1 mouse_genomes_project 7 1653731 1663154 - MGP_CBAJ_P0080923 Tnnt1 protein_coding protein_coding MGP_CBAJ_T0080924.1 MGP_CBAJ_G0031208.1 mouse_genomes_project 7 1653760 1658731 - Tnnt1 protein_coding retained_intron MGP_CBAJ_T0080925.1 MGP_CBAJ_G0031208.1 mouse_genomes_project 7 1656362 1664747 - MGP_CBAJ_P0080925 Tnnt1 protein_coding protein_coding MGP_CBAJ_T0080926.1 MGP_CBAJ_G0031208.1 mouse_genomes_project 7 1656394 1658591 - Tnnt1 protein_coding retained_intron MGP_CBAJ_T0080927.1 MGP_CBAJ_G0031208.1 mouse_genomes_project 7 1657302 1663401 - MGP_CBAJ_P0080927 Tnnt1 protein_coding protein_coding MGP_CBAJ_T0080928.1 MGP_CBAJ_G0031208.1 mouse_genomes_project 7 1657370 1663360 - MGP_CBAJ_P0080928 Tnnt1 protein_coding protein_coding MGP_CBAJ_T0080929.1 MGP_CBAJ_G0031208.1 mouse_genomes_project 7 1658402 1665168 - MGP_CBAJ_P0080929 Tnnt1 protein_coding protein_coding MGP_CBAJ_T0080930.1 MGP_CBAJ_G0031208.1 mouse_genomes_project 7 1662614 1663893 - MGP_CBAJ_P0080930 Tnnt1 protein_coding protein_coding MGP_CBAJ_T0018161.1 MGP_CBAJ_G0015433.1 mouse_genomes_project 7 140943743 140954416 + Gm21984 processed_transcript processed_transcript MGP_CBAJ_T0008834.1 MGP_CBAJ_G0007124.1 mouse_genomes_project 7 87418666 87452530 + Mir9-3hg lincRNA lincRNA MGP_CBAJ_T0008835.1 MGP_CBAJ_G0007124.1 mouse_genomes_project 7 87418678 87452735 + Mir9-3hg lincRNA lincRNA MGP_CBAJ_T0008836.1 MGP_CBAJ_G0007124.1 mouse_genomes_project 7 87418757 87455629 + Mir9-3hg lincRNA lincRNA MGP_CBAJ_T0008837.1 MGP_CBAJ_G0007124.1 mouse_genomes_project 7 87418761 87452620 + Mir9-3hg lincRNA lincRNA MGP_CBAJ_T0008838.1 MGP_CBAJ_G0007124.1 mouse_genomes_project 7 87436686 87453818 + Mir9-3hg lincRNA lincRNA MGP_CBAJ_T0008839.1 MGP_CBAJ_G0007124.1 mouse_genomes_project 7 87436889 87452486 + Mir9-3hg lincRNA lincRNA MGP_CBAJ_T0008840.1 MGP_CBAJ_G0007124.1 mouse_genomes_project 7 87449299 87453271 + Mir9-3hg lincRNA lincRNA MGP_CBAJ_T0085069.1 MGP_CBAJ_G0032364.1 mouse_genomes_project 7 115266646 115267594 - MGP_CBAJ_P0085069 Olfr645 protein_coding protein_coding MGP_CBAJ_T0015652.1 MGP_CBAJ_G0013764.1 mouse_genomes_project 7 110740984 110741287 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0083274.1 MGP_CBAJ_G0031873.1 mouse_genomes_project 7 49194332 49201611 - MGP_CBAJ_P0083274 protein_coding protein_coding MGP_CBAJ_T0002216.1 MGP_CBAJ_G0002131.1 mouse_genomes_project 7 80736154 80737628 - TEC TEC MGP_CBAJ_T0083200.1 MGP_CBAJ_G0031849.1 mouse_genomes_project 7 48835231 48838618 - MGP_CBAJ_P0083200 Atf5 protein_coding protein_coding MGP_CBAJ_T0083201.1 MGP_CBAJ_G0031849.1 mouse_genomes_project 7 48835232 48839559 - MGP_CBAJ_P0083201 Atf5 protein_coding protein_coding MGP_CBAJ_T0084718.1 MGP_CBAJ_G0032228.1 mouse_genomes_project 7 110464171 110495070 + MGP_CBAJ_P0084718 Chrdl2 protein_coding protein_coding MGP_CBAJ_T0084719.1 MGP_CBAJ_G0032228.1 mouse_genomes_project 7 110467671 110495072 + MGP_CBAJ_P0084719 Chrdl2 protein_coding protein_coding MGP_CBAJ_T0084720.1 MGP_CBAJ_G0032228.1 mouse_genomes_project 7 110482370 110495070 + MGP_CBAJ_P0084720 Chrdl2 protein_coding protein_coding MGP_CBAJ_T0015546.1 MGP_CBAJ_G0013658.1 mouse_genomes_project 7 41325049 41325274 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0082843.1 MGP_CBAJ_G0031760.1 mouse_genomes_project 7 37641613 37687642 + MGP_CBAJ_P0082843 Cep89 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082844.1 MGP_CBAJ_G0031760.1 mouse_genomes_project 7 37641633 37687644 + MGP_CBAJ_P0082844 Cep89 protein_coding protein_coding MGP_CBAJ_T0082845.1 MGP_CBAJ_G0031760.1 mouse_genomes_project 7 37641685 37659966 + Cep89 protein_coding retained_intron MGP_CBAJ_T0082846.1 MGP_CBAJ_G0031760.1 mouse_genomes_project 7 37641694 37658620 + Cep89 protein_coding processed_transcript MGP_CBAJ_T0082847.1 MGP_CBAJ_G0031760.1 mouse_genomes_project 7 37641708 37658603 + MGP_CBAJ_P0082847 Cep89 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082848.1 MGP_CBAJ_G0031760.1 mouse_genomes_project 7 37665294 37667235 + Cep89 protein_coding processed_transcript MGP_CBAJ_T0082849.1 MGP_CBAJ_G0031760.1 mouse_genomes_project 7 37665386 37670205 + Cep89 protein_coding retained_intron MGP_CBAJ_T0082850.1 MGP_CBAJ_G0031760.1 mouse_genomes_project 7 37666754 37677169 + MGP_CBAJ_P0082850 Cep89 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082851.1 MGP_CBAJ_G0031760.1 mouse_genomes_project 7 37667255 37676670 + Cep89 protein_coding processed_transcript MGP_CBAJ_T0082852.1 MGP_CBAJ_G0031760.1 mouse_genomes_project 7 37676145 37681529 + Cep89 protein_coding retained_intron MGP_CBAJ_T0082853.1 MGP_CBAJ_G0031760.1 mouse_genomes_project 7 37677276 37687636 + MGP_CBAJ_P0082853 Cep89 protein_coding protein_coding MGP_CBAJ_T0015494.1 MGP_CBAJ_G0013606.1 mouse_genomes_project 7 15558551 15558666 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0087183.1 MGP_CBAJ_G0032903.1 mouse_genomes_project 7 157171237 157175355 + MGP_CBAJ_P0087183 Cd151 protein_coding protein_coding MGP_CBAJ_T0087184.1 MGP_CBAJ_G0032903.1 mouse_genomes_project 7 157171237 157175355 + MGP_CBAJ_P0087184 Cd151 protein_coding protein_coding MGP_CBAJ_T0087185.1 MGP_CBAJ_G0032903.1 mouse_genomes_project 7 157172664 157175355 + MGP_CBAJ_P0087185 Cd151 protein_coding protein_coding MGP_CBAJ_T0015677.1 MGP_CBAJ_G0013789.1 mouse_genomes_project 7 135583275 135583689 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0085014.1 MGP_CBAJ_G0032310.1 mouse_genomes_project 7 114079091 114080045 - MGP_CBAJ_P0085014 Olfr586 protein_coding protein_coding MGP_CBAJ_T0083018.1 MGP_CBAJ_G0031803.1 mouse_genomes_project 7 47125268 47145663 - MGP_CBAJ_P0083018 Iglon5 protein_coding protein_coding MGP_CBAJ_T0083019.1 MGP_CBAJ_G0031803.1 mouse_genomes_project 7 47126550 47133619 - MGP_CBAJ_P0083019 Iglon5 protein_coding protein_coding MGP_CBAJ_T0083020.1 MGP_CBAJ_G0031803.1 mouse_genomes_project 7 47126827 47145611 - MGP_CBAJ_P0083020 Iglon5 protein_coding unknown_likely_coding MGP_CBAJ_T0083045.1 MGP_CBAJ_G0031811.1 mouse_genomes_project 7 47356097 47362502 + MGP_CBAJ_P0083045 Ctu1 protein_coding protein_coding MGP_CBAJ_T0081272.1 MGP_CBAJ_G0031349.1 mouse_genomes_project 7 13105547 13176807 + MGP_CBAJ_P0081272 Obox7 protein_coding protein_coding MGP_CBAJ_T0081273.1 MGP_CBAJ_G0031349.1 mouse_genomes_project 7 13105547 13176811 + MGP_CBAJ_P0081273 Obox7 protein_coding protein_coding MGP_CBAJ_T0086958.1 MGP_CBAJ_G0032855.1 mouse_genomes_project 7 156236776 156239980 + MGP_CBAJ_P0086958 Olfr539 protein_coding protein_coding MGP_CBAJ_T0015465.1 MGP_CBAJ_G0013577.1 mouse_genomes_project 7 1807214 1808004 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0102202.1 MGP_CBAJ_G0040231.1 mouse_genomes_project 7 114490310 114491277 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0082567.1 MGP_CBAJ_G0031700.1 mouse_genomes_project 7 31993834 32013703 - MGP_CBAJ_P0082567 Kmt2b protein_coding protein_coding MGP_CBAJ_T0082568.1 MGP_CBAJ_G0031700.1 mouse_genomes_project 7 31993834 32013694 - MGP_CBAJ_P0082568 Kmt2b protein_coding protein_coding MGP_CBAJ_T0082569.1 MGP_CBAJ_G0031700.1 mouse_genomes_project 7 31993836 32010317 - MGP_CBAJ_P0082569 Kmt2b protein_coding protein_coding MGP_CBAJ_T0082570.1 MGP_CBAJ_G0031700.1 mouse_genomes_project 7 31994729 31995641 - Kmt2b protein_coding retained_intron MGP_CBAJ_T0082571.1 MGP_CBAJ_G0031700.1 mouse_genomes_project 7 31998145 31999151 - Kmt2b protein_coding retained_intron MGP_CBAJ_T0082572.1 MGP_CBAJ_G0031700.1 mouse_genomes_project 7 32000549 32002141 - Kmt2b protein_coding processed_transcript MGP_CBAJ_T0082573.1 MGP_CBAJ_G0031700.1 mouse_genomes_project 7 32002006 32003971 - Kmt2b protein_coding processed_transcript MGP_CBAJ_T0082574.1 MGP_CBAJ_G0031700.1 mouse_genomes_project 7 32009257 32010051 - Kmt2b protein_coding processed_transcript MGP_CBAJ_T0081976.1 MGP_CBAJ_G0031557.1 mouse_genomes_project 7 26713770 26797071 - MGP_CBAJ_P0081976 Nlrp9c protein_coding protein_coding MGP_CBAJ_T0081977.1 MGP_CBAJ_G0031557.1 mouse_genomes_project 7 26768451 26797076 - MGP_CBAJ_P0081977 Nlrp9c protein_coding protein_coding MGP_CBAJ_T0081978.1 MGP_CBAJ_G0031557.1 mouse_genomes_project 7 26777252 26806533 - Nlrp9c protein_coding retained_intron MGP_CBAJ_T0081979.1 MGP_CBAJ_G0031557.1 mouse_genomes_project 7 26777252 26806529 - Nlrp9c protein_coding processed_transcript MGP_CBAJ_T0081980.1 MGP_CBAJ_G0031557.1 mouse_genomes_project 7 26795100 26806533 - Nlrp9c protein_coding retained_intron MGP_CBAJ_T0002250.1 MGP_CBAJ_G0002164.1 mouse_genomes_project 7 110945274 110946201 + TEC TEC MGP_CBAJ_T0081471.1 MGP_CBAJ_G0031416.1 mouse_genomes_project 7 18468471 18478764 + MGP_CBAJ_P0081471 Mypop protein_coding protein_coding MGP_CBAJ_T0081472.1 MGP_CBAJ_G0031416.1 mouse_genomes_project 7 18468545 18478766 + MGP_CBAJ_P0081472 Mypop protein_coding protein_coding MGP_CBAJ_T0081473.1 MGP_CBAJ_G0031416.1 mouse_genomes_project 7 18469197 18470329 + Mypop protein_coding retained_intron MGP_CBAJ_T0015522.1 MGP_CBAJ_G0013634.1 mouse_genomes_project 7 26388162 26388916 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0084368.1 MGP_CBAJ_G0032118.1 mouse_genomes_project 7 92050449 92088948 + Tmc3 protein_coding retained_intron MGP_CBAJ_T0084369.1 MGP_CBAJ_G0032118.1 mouse_genomes_project 7 92050453 92062702 + Tmc3 protein_coding retained_intron MGP_CBAJ_T0084370.1 MGP_CBAJ_G0032118.1 mouse_genomes_project 7 92050453 92096453 + MGP_CBAJ_P0084370 Tmc3 protein_coding protein_coding MGP_CBAJ_T0084371.1 MGP_CBAJ_G0032118.1 mouse_genomes_project 7 92050614 92093788 + MGP_CBAJ_P0084371 Tmc3 protein_coding protein_coding MGP_CBAJ_T0084372.1 MGP_CBAJ_G0032118.1 mouse_genomes_project 7 92068362 92069736 + Tmc3 protein_coding retained_intron MGP_CBAJ_T0005178.1 MGP_CBAJ_G0004394.1 mouse_genomes_project 7 107720588 107773085 - Rsf1os1 antisense antisense MGP_CBAJ_T0015535.1 MGP_CBAJ_G0013647.1 mouse_genomes_project 7 35720627 35721354 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015563.1 MGP_CBAJ_G0013675.1 mouse_genomes_project 7 45548822 45548944 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0083042.1 MGP_CBAJ_G0031809.1 mouse_genomes_project 7 47312252 47327077 + MGP_CBAJ_P0083042 Ceacam18 protein_coding protein_coding MGP_CBAJ_T0005130.1 MGP_CBAJ_G0004359.1 mouse_genomes_project 7 48286999 48287724 + Gm44780 antisense antisense MGP_CBAJ_T0087044.1 MGP_CBAJ_G0032883.1 mouse_genomes_project 7 156841322 156846178 - MGP_CBAJ_P0087044 Hras protein_coding protein_coding MGP_CBAJ_T0087045.1 MGP_CBAJ_G0032883.1 mouse_genomes_project 7 156842151 156846222 - MGP_CBAJ_P0087045 Hras protein_coding protein_coding MGP_CBAJ_T0087046.1 MGP_CBAJ_G0032883.1 mouse_genomes_project 7 156843143 156846212 - Hras protein_coding retained_intron MGP_CBAJ_T0087047.1 MGP_CBAJ_G0032883.1 mouse_genomes_project 7 156843143 156846223 - MGP_CBAJ_P0087047 Hras protein_coding protein_coding MGP_CBAJ_T0087048.1 MGP_CBAJ_G0032883.1 mouse_genomes_project 7 156843144 156844722 - Hras protein_coding processed_transcript MGP_CBAJ_T0087049.1 MGP_CBAJ_G0032883.1 mouse_genomes_project 7 156843147 156844195 - Hras protein_coding processed_transcript MGP_CBAJ_T0087050.1 MGP_CBAJ_G0032883.1 mouse_genomes_project 7 156843147 156846100 - MGP_CBAJ_P0087050 Hras protein_coding nonsense_mediated_decay MGP_CBAJ_T0100765.1 MGP_CBAJ_G0039020.1 mouse_genomes_project 7 127393122 127393254 - Gm24982 snoRNA snoRNA MGP_CBAJ_T0015583.1 MGP_CBAJ_G0013695.1 mouse_genomes_project 7 52658393 52658667 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0084113.1 MGP_CBAJ_G0032063.1 mouse_genomes_project 7 87667548 87680391 - MGP_CBAJ_P0084113 Plin1 protein_coding protein_coding MGP_CBAJ_T0084114.1 MGP_CBAJ_G0032063.1 mouse_genomes_project 7 87668459 87679775 - MGP_CBAJ_P0084114 Plin1 protein_coding protein_coding MGP_CBAJ_T0084115.1 MGP_CBAJ_G0032063.1 mouse_genomes_project 7 87668459 87680380 - MGP_CBAJ_P0084115 Plin1 protein_coding protein_coding MGP_CBAJ_T0084116.1 MGP_CBAJ_G0032063.1 mouse_genomes_project 7 87669676 87670584 - MGP_CBAJ_P0084116 Plin1 protein_coding protein_coding MGP_CBAJ_T0084117.1 MGP_CBAJ_G0032063.1 mouse_genomes_project 7 87672692 87677469 - MGP_CBAJ_P0084117 Plin1 protein_coding protein_coding MGP_CBAJ_T0084118.1 MGP_CBAJ_G0032063.1 mouse_genomes_project 7 87674113 87680439 - MGP_CBAJ_P0084118 Plin1 protein_coding protein_coding MGP_CBAJ_T0084119.1 MGP_CBAJ_G0032063.1 mouse_genomes_project 7 87676586 87680507 - MGP_CBAJ_P0084119 Plin1 protein_coding protein_coding MGP_CBAJ_T0081446.1 MGP_CBAJ_G0031405.1 mouse_genomes_project 7 17898305 17909129 - MGP_CBAJ_P0081446 protein_coding protein_coding MGP_CBAJ_T0102214.1 MGP_CBAJ_G0040243.1 mouse_genomes_project 7 115834675 115835047 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0083584.1 MGP_CBAJ_G0031950.1 mouse_genomes_project 7 51442922 51500980 - MGP_CBAJ_P0083584 Ptpn5 protein_coding protein_coding MGP_CBAJ_T0083585.1 MGP_CBAJ_G0031950.1 mouse_genomes_project 7 51442926 51499974 - MGP_CBAJ_P0083585 Ptpn5 protein_coding protein_coding MGP_CBAJ_T0085160.1 MGP_CBAJ_G0032420.1 mouse_genomes_project 7 116746423 116750594 + MGP_CBAJ_P0085160 Cnga4 protein_coding protein_coding MGP_CBAJ_T0002258.1 MGP_CBAJ_G0002172.1 mouse_genomes_project 7 135809850 135815289 + TEC TEC MGP_CBAJ_T0085047.1 MGP_CBAJ_G0032342.1 mouse_genomes_project 7 114875465 114876317 - MGP_CBAJ_P0085047 Olfr68 protein_coding protein_coding MGP_CBAJ_T0083174.1 MGP_CBAJ_G0031841.1 mouse_genomes_project 7 48553203 48573158 + Napsa protein_coding retained_intron MGP_CBAJ_T0083175.1 MGP_CBAJ_G0031841.1 mouse_genomes_project 7 48553203 48576824 + MGP_CBAJ_P0083175 Napsa protein_coding protein_coding MGP_CBAJ_T0083176.1 MGP_CBAJ_G0031841.1 mouse_genomes_project 7 48553371 48576760 + MGP_CBAJ_P0083176 Napsa protein_coding unknown_likely_coding MGP_CBAJ_T0083835.1 MGP_CBAJ_G0032014.1 mouse_genomes_project 7 71950052 71963188 + MGP_CBAJ_P0083835 Tm2d3 protein_coding protein_coding MGP_CBAJ_T0083836.1 MGP_CBAJ_G0032014.1 mouse_genomes_project 7 71952291 71963179 + MGP_CBAJ_P0083836 Tm2d3 protein_coding protein_coding MGP_CBAJ_T0083837.1 MGP_CBAJ_G0032014.1 mouse_genomes_project 7 71952300 71963190 + MGP_CBAJ_P0083837 Tm2d3 protein_coding protein_coding MGP_CBAJ_T0083838.1 MGP_CBAJ_G0032014.1 mouse_genomes_project 7 71952330 71956612 + MGP_CBAJ_P0083838 Tm2d3 protein_coding protein_coding MGP_CBAJ_T0083839.1 MGP_CBAJ_G0032014.1 mouse_genomes_project 7 71952350 71956759 + MGP_CBAJ_P0083839 Tm2d3 protein_coding protein_coding MGP_CBAJ_T0083840.1 MGP_CBAJ_G0032014.1 mouse_genomes_project 7 71952359 71963177 + MGP_CBAJ_P0083840 Tm2d3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083841.1 MGP_CBAJ_G0032014.1 mouse_genomes_project 7 71952360 71963179 + MGP_CBAJ_P0083841 Tm2d3 protein_coding protein_coding MGP_CBAJ_T0083842.1 MGP_CBAJ_G0032014.1 mouse_genomes_project 7 71952364 71954111 + MGP_CBAJ_P0083842 Tm2d3 protein_coding protein_coding MGP_CBAJ_T0083843.1 MGP_CBAJ_G0032014.1 mouse_genomes_project 7 71952407 71960429 + MGP_CBAJ_P0083843 Tm2d3 protein_coding protein_coding MGP_CBAJ_T0083844.1 MGP_CBAJ_G0032014.1 mouse_genomes_project 7 71952407 71956754 + MGP_CBAJ_P0083844 Tm2d3 protein_coding protein_coding MGP_CBAJ_T0081133.1 MGP_CBAJ_G0031292.1 mouse_genomes_project 7 9810043 9810958 + MGP_CBAJ_P0081133 Vmn1r74 protein_coding protein_coding MGP_CBAJ_T0087240.1 MGP_CBAJ_G0032918.1 mouse_genomes_project 7 158005676 158008349 - MGP_CBAJ_P0087240 protein_coding protein_coding MGP_CBAJ_T0100738.1 MGP_CBAJ_G0038993.1 mouse_genomes_project 7 65085585 65085673 - Gm22496 snoRNA snoRNA MGP_CBAJ_T0010777.1 MGP_CBAJ_G0008915.1 mouse_genomes_project 7 85700252 85700346 - Gm44358 miRNA miRNA MGP_CBAJ_T0083904.1 MGP_CBAJ_G0032027.1 mouse_genomes_project 7 73650918 73656939 + MGP_CBAJ_P0083904 Lysmd4 protein_coding protein_coding MGP_CBAJ_T0083905.1 MGP_CBAJ_G0032027.1 mouse_genomes_project 7 73650990 73656939 + MGP_CBAJ_P0083905 Lysmd4 protein_coding protein_coding MGP_CBAJ_T0083265.1 MGP_CBAJ_G0031865.1 mouse_genomes_project 7 49064769 49070154 + MGP_CBAJ_P0083265 Rras protein_coding unknown_likely_coding MGP_CBAJ_T0084431.1 MGP_CBAJ_G0032151.1 mouse_genomes_project 7 95597562 95660417 - MGP_CBAJ_P0084431 Folh1 protein_coding protein_coding MGP_CBAJ_T0084432.1 MGP_CBAJ_G0032151.1 mouse_genomes_project 7 95597562 95660361 - MGP_CBAJ_P0084432 Folh1 protein_coding protein_coding MGP_CBAJ_T0085466.1 MGP_CBAJ_G0032536.1 mouse_genomes_project 7 123677622 124009855 - MGP_CBAJ_P0085466 Galnt18 protein_coding protein_coding MGP_CBAJ_T0085467.1 MGP_CBAJ_G0032536.1 mouse_genomes_project 7 123677622 124009855 - MGP_CBAJ_P0085467 Galnt18 protein_coding protein_coding MGP_CBAJ_T0083604.1 MGP_CBAJ_G0031963.1 mouse_genomes_project 7 53432202 53448502 + Zdhhc13 protein_coding processed_transcript MGP_CBAJ_T0083605.1 MGP_CBAJ_G0031963.1 mouse_genomes_project 7 53432281 53475327 + MGP_CBAJ_P0083605 Zdhhc13 protein_coding protein_coding MGP_CBAJ_T0015477.1 MGP_CBAJ_G0013589.1 mouse_genomes_project 7 11630800 11631590 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0086078.1 MGP_CBAJ_G0032664.1 mouse_genomes_project 7 140662801 140664088 + Bola2 protein_coding retained_intron MGP_CBAJ_T0086079.1 MGP_CBAJ_G0032664.1 mouse_genomes_project 7 140662836 140664459 + MGP_CBAJ_P0086079 Bola2 protein_coding protein_coding MGP_CBAJ_T0086080.1 MGP_CBAJ_G0032664.1 mouse_genomes_project 7 140663366 140664094 + Bola2 protein_coding processed_transcript MGP_CBAJ_T0086081.1 MGP_CBAJ_G0032664.1 mouse_genomes_project 7 140663373 140664098 + MGP_CBAJ_P0086081 Bola2 protein_coding protein_coding MGP_CBAJ_T0086082.1 MGP_CBAJ_G0032664.1 mouse_genomes_project 7 140663403 140667199 + Bola2 protein_coding retained_intron MGP_CBAJ_T0005151.1 MGP_CBAJ_G0004375.1 mouse_genomes_project 7 86858357 86894308 - Gm26633 antisense antisense MGP_CBAJ_T0005059.1 MGP_CBAJ_G0004310.1 mouse_genomes_project 7 1276518 1286936 - D030047H15Rik antisense antisense MGP_CBAJ_T0002252.1 MGP_CBAJ_G0002166.1 mouse_genomes_project 7 130215766 130217667 + TEC TEC MGP_CBAJ_T0099511.1 MGP_CBAJ_G0037766.1 mouse_genomes_project 7 121002171 121002278 - Gm25450 snRNA snRNA MGP_CBAJ_T0010724.1 MGP_CBAJ_G0008862.1 mouse_genomes_project 7 25205351 25205461 - Mir6537 miRNA miRNA MGP_CBAJ_T0085048.1 MGP_CBAJ_G0032343.1 mouse_genomes_project 7 114894447 114895410 - MGP_CBAJ_P0085048 Olfr67 protein_coding protein_coding MGP_CBAJ_T0008847.1 MGP_CBAJ_G0007130.1 mouse_genomes_project 7 89762984 89769033 + 2900076A07Rik lincRNA lincRNA MGP_CBAJ_T0008848.1 MGP_CBAJ_G0007130.1 mouse_genomes_project 7 89762997 89769625 + 2900076A07Rik lincRNA lincRNA MGP_CBAJ_T0008849.1 MGP_CBAJ_G0007130.1 mouse_genomes_project 7 89763005 89770967 + 2900076A07Rik lincRNA lincRNA MGP_CBAJ_T0008850.1 MGP_CBAJ_G0007130.1 mouse_genomes_project 7 89763005 89768917 + 2900076A07Rik lincRNA lincRNA MGP_CBAJ_T0008851.1 MGP_CBAJ_G0007130.1 mouse_genomes_project 7 89763040 89768719 + 2900076A07Rik lincRNA lincRNA MGP_CBAJ_T0008852.1 MGP_CBAJ_G0007130.1 mouse_genomes_project 7 89767877 89768990 + 2900076A07Rik lincRNA lincRNA MGP_CBAJ_T0008853.1 MGP_CBAJ_G0007130.1 mouse_genomes_project 7 89768254 89769069 + 2900076A07Rik lincRNA lincRNA MGP_CBAJ_T0008854.1 MGP_CBAJ_G0007130.1 mouse_genomes_project 7 89768269 89770971 + 2900076A07Rik lincRNA lincRNA MGP_CBAJ_T0087271.1 MGP_CBAJ_G0032927.1 mouse_genomes_project 7 158308315 158342373 + MGP_CBAJ_P0087271 Lsp1 protein_coding protein_coding MGP_CBAJ_T0087272.1 MGP_CBAJ_G0032927.1 mouse_genomes_project 7 158308352 158342373 + MGP_CBAJ_P0087272 Lsp1 protein_coding protein_coding MGP_CBAJ_T0087273.1 MGP_CBAJ_G0032927.1 mouse_genomes_project 7 158308370 158342109 + MGP_CBAJ_P0087273 Lsp1 protein_coding protein_coding MGP_CBAJ_T0087274.1 MGP_CBAJ_G0032927.1 mouse_genomes_project 7 158319349 158342105 + MGP_CBAJ_P0087274 Lsp1 protein_coding protein_coding MGP_CBAJ_T0087275.1 MGP_CBAJ_G0032927.1 mouse_genomes_project 7 158319378 158335877 + Lsp1 protein_coding retained_intron MGP_CBAJ_T0087276.1 MGP_CBAJ_G0032927.1 mouse_genomes_project 7 158319657 158342106 + MGP_CBAJ_P0087276 Lsp1 protein_coding protein_coding MGP_CBAJ_T0087277.1 MGP_CBAJ_G0032927.1 mouse_genomes_project 7 158322500 158334010 + Lsp1 protein_coding processed_transcript MGP_CBAJ_T0087278.1 MGP_CBAJ_G0032927.1 mouse_genomes_project 7 158324519 158342373 + Lsp1 protein_coding processed_transcript MGP_CBAJ_T0087279.1 MGP_CBAJ_G0032927.1 mouse_genomes_project 7 158330764 158337489 + Lsp1 protein_coding processed_transcript MGP_CBAJ_T0087280.1 MGP_CBAJ_G0032927.1 mouse_genomes_project 7 158330909 158333986 + Lsp1 protein_coding processed_transcript MGP_CBAJ_T0087281.1 MGP_CBAJ_G0032927.1 mouse_genomes_project 7 158336522 158337928 + Lsp1 protein_coding retained_intron MGP_CBAJ_T0087282.1 MGP_CBAJ_G0032927.1 mouse_genomes_project 7 158337318 158342023 + Lsp1 protein_coding retained_intron MGP_CBAJ_T0002214.1 MGP_CBAJ_G0002129.1 mouse_genomes_project 7 80657346 80659388 - TEC TEC MGP_CBAJ_T0081721.1 MGP_CBAJ_G0031493.1 mouse_genomes_project 7 24228672 24246614 - MGP_CBAJ_P0081721 Zfp94 protein_coding protein_coding MGP_CBAJ_T0081722.1 MGP_CBAJ_G0031493.1 mouse_genomes_project 7 24228765 24246675 - MGP_CBAJ_P0081722 Zfp94 protein_coding protein_coding MGP_CBAJ_T0081723.1 MGP_CBAJ_G0031493.1 mouse_genomes_project 7 24230595 24239416 - Zfp94 protein_coding retained_intron MGP_CBAJ_T0081724.1 MGP_CBAJ_G0031493.1 mouse_genomes_project 7 24238595 24246633 - Zfp94 protein_coding processed_transcript MGP_CBAJ_T0081725.1 MGP_CBAJ_G0031493.1 mouse_genomes_project 7 24238888 24246617 - Zfp94 protein_coding retained_intron MGP_CBAJ_T0081726.1 MGP_CBAJ_G0031493.1 mouse_genomes_project 7 24239003 24246591 - Zfp94 protein_coding processed_transcript MGP_CBAJ_T0102152.1 MGP_CBAJ_G0040181.1 mouse_genomes_project 7 52422767 52571836 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0083185.1 MGP_CBAJ_G0031847.1 mouse_genomes_project 7 48739455 48755284 - MGP_CBAJ_P0083185 Zfp473 protein_coding protein_coding MGP_CBAJ_T0083186.1 MGP_CBAJ_G0031847.1 mouse_genomes_project 7 48739477 48761743 - MGP_CBAJ_P0083186 Zfp473 protein_coding protein_coding MGP_CBAJ_T0083187.1 MGP_CBAJ_G0031847.1 mouse_genomes_project 7 48739983 48761658 - MGP_CBAJ_P0083187 Zfp473 protein_coding protein_coding MGP_CBAJ_T0083188.1 MGP_CBAJ_G0031847.1 mouse_genomes_project 7 48740203 48756396 - MGP_CBAJ_P0083188 Zfp473 protein_coding unknown_likely_coding MGP_CBAJ_T0083189.1 MGP_CBAJ_G0031847.1 mouse_genomes_project 7 48742433 48761701 - MGP_CBAJ_P0083189 Zfp473 protein_coding protein_coding MGP_CBAJ_T0083190.1 MGP_CBAJ_G0031847.1 mouse_genomes_project 7 48742584 48764402 - MGP_CBAJ_P0083190 Zfp473 protein_coding protein_coding MGP_CBAJ_T0100742.1 MGP_CBAJ_G0038997.1 mouse_genomes_project 7 65513218 65513288 - Snord107 snoRNA snoRNA MGP_CBAJ_T0008776.1 MGP_CBAJ_G0007079.1 mouse_genomes_project 7 70073186 70078538 + Gm45052 lincRNA lincRNA MGP_CBAJ_T0010800.1 MGP_CBAJ_G0008938.1 mouse_genomes_project 7 141872708 141872784 + Mir762 miRNA miRNA MGP_CBAJ_T0086823.1 MGP_CBAJ_G0032811.1 mouse_genomes_project 7 153514625 153710925 - MGP_CBAJ_P0086823 Tcerg1l protein_coding protein_coding MGP_CBAJ_T0086824.1 MGP_CBAJ_G0032811.1 mouse_genomes_project 7 153515368 153576566 - Tcerg1l protein_coding processed_transcript MGP_CBAJ_T0086825.1 MGP_CBAJ_G0032811.1 mouse_genomes_project 7 153564088 153710927 - Tcerg1l protein_coding retained_intron MGP_CBAJ_T0011573.1 MGP_CBAJ_G0009711.1 mouse_genomes_project 7 158431504 158431574 + Gm27786 misc_RNA misc_RNA MGP_CBAJ_T0081326.1 MGP_CBAJ_G0031364.1 mouse_genomes_project 7 15136886 15152107 - MGP_CBAJ_P0081326 C5ar1 protein_coding protein_coding MGP_CBAJ_T0081327.1 MGP_CBAJ_G0031364.1 mouse_genomes_project 7 15136888 15151905 - MGP_CBAJ_P0081327 C5ar1 protein_coding protein_coding MGP_CBAJ_T0082251.1 MGP_CBAJ_G0031632.1 mouse_genomes_project 7 29831473 29846443 + MGP_CBAJ_P0082251 Hnrnpl protein_coding protein_coding MGP_CBAJ_T0082252.1 MGP_CBAJ_G0031632.1 mouse_genomes_project 7 29831738 29839837 + Hnrnpl protein_coding retained_intron MGP_CBAJ_T0082253.1 MGP_CBAJ_G0031632.1 mouse_genomes_project 7 29831740 29846426 + MGP_CBAJ_P0082253 Hnrnpl protein_coding protein_coding MGP_CBAJ_T0082254.1 MGP_CBAJ_G0031632.1 mouse_genomes_project 7 29832450 29838004 + MGP_CBAJ_P0082254 Hnrnpl protein_coding protein_coding MGP_CBAJ_T0082255.1 MGP_CBAJ_G0031632.1 mouse_genomes_project 7 29833772 29846443 + MGP_CBAJ_P0082255 Hnrnpl protein_coding protein_coding MGP_CBAJ_T0082256.1 MGP_CBAJ_G0031632.1 mouse_genomes_project 7 29833819 29846417 + MGP_CBAJ_P0082256 Hnrnpl protein_coding protein_coding MGP_CBAJ_T0082257.1 MGP_CBAJ_G0031632.1 mouse_genomes_project 7 29833822 29839813 + Hnrnpl protein_coding retained_intron MGP_CBAJ_T0082258.1 MGP_CBAJ_G0031632.1 mouse_genomes_project 7 29836230 29846426 + MGP_CBAJ_P0082258 Hnrnpl protein_coding nonsense_mediated_decay MGP_CBAJ_T0082259.1 MGP_CBAJ_G0031632.1 mouse_genomes_project 7 29836263 29837333 + Hnrnpl protein_coding retained_intron MGP_CBAJ_T0082260.1 MGP_CBAJ_G0031632.1 mouse_genomes_project 7 29837709 29841577 + Hnrnpl protein_coding retained_intron MGP_CBAJ_T0082261.1 MGP_CBAJ_G0031632.1 mouse_genomes_project 7 29837984 29844902 + Hnrnpl protein_coding retained_intron MGP_CBAJ_T0082262.1 MGP_CBAJ_G0031632.1 mouse_genomes_project 7 29840710 29841589 + Hnrnpl protein_coding retained_intron MGP_CBAJ_T0082263.1 MGP_CBAJ_G0031632.1 mouse_genomes_project 7 29845391 29846421 + Hnrnpl protein_coding retained_intron MGP_CBAJ_T0084373.1 MGP_CBAJ_G0032119.1 mouse_genomes_project 7 92103225 92113573 + MGP_CBAJ_P0084373 Stard5 protein_coding protein_coding MGP_CBAJ_T0084374.1 MGP_CBAJ_G0032119.1 mouse_genomes_project 7 92103266 92104727 + Stard5 protein_coding retained_intron MGP_CBAJ_T0084375.1 MGP_CBAJ_G0032119.1 mouse_genomes_project 7 92103266 92124385 + MGP_CBAJ_P0084375 Stard5 protein_coding protein_coding MGP_CBAJ_T0084376.1 MGP_CBAJ_G0032119.1 mouse_genomes_project 7 92103282 92109330 + Stard5 protein_coding retained_intron MGP_CBAJ_T0084377.1 MGP_CBAJ_G0032119.1 mouse_genomes_project 7 92103808 92104611 + Stard5 protein_coding processed_transcript MGP_CBAJ_T0100747.1 MGP_CBAJ_G0039002.1 mouse_genomes_project 7 90259568 90259693 + Gm25907 snoRNA snoRNA MGP_CBAJ_T0010776.1 MGP_CBAJ_G0008914.1 mouse_genomes_project 7 81071338 81071390 + Mir7234 miRNA miRNA MGP_CBAJ_T0098451.1 MGP_CBAJ_G0036713.1 mouse_genomes_project 7 37239369 37240509 - Gm44836 sense_intronic sense_intronic MGP_CBAJ_T0085304.1 MGP_CBAJ_G0032475.1 mouse_genomes_project 7 119725382 119726315 + MGP_CBAJ_P0085304 Olfr474 protein_coding protein_coding MGP_CBAJ_T0085374.1 MGP_CBAJ_G0032517.1 mouse_genomes_project 7 121732240 121739085 - MGP_CBAJ_P0085374 Ascl3 protein_coding protein_coding MGP_CBAJ_T0102079.1 MGP_CBAJ_G0040109.1 mouse_genomes_project 7 12934274 12934974 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0086577.1 MGP_CBAJ_G0032755.1 mouse_genomes_project 7 142975896 143040674 + Inpp5f protein_coding processed_transcript MGP_CBAJ_T0086578.1 MGP_CBAJ_G0032755.1 mouse_genomes_project 7 142975928 143069591 + MGP_CBAJ_P0086578 Inpp5f protein_coding protein_coding MGP_CBAJ_T0086579.1 MGP_CBAJ_G0032755.1 mouse_genomes_project 7 143028021 143048191 + Inpp5f protein_coding retained_intron MGP_CBAJ_T0086580.1 MGP_CBAJ_G0032755.1 mouse_genomes_project 7 143032693 143037618 + Inpp5f protein_coding processed_transcript MGP_CBAJ_T0086581.1 MGP_CBAJ_G0032755.1 mouse_genomes_project 7 143036737 143037823 + Inpp5f protein_coding retained_intron MGP_CBAJ_T0086582.1 MGP_CBAJ_G0032755.1 mouse_genomes_project 7 143050399 143069440 + Inpp5f protein_coding retained_intron MGP_CBAJ_T0086583.1 MGP_CBAJ_G0032755.1 mouse_genomes_project 7 143061650 143066817 + MGP_CBAJ_P0086583 Inpp5f protein_coding nonsense_mediated_decay MGP_CBAJ_T0086584.1 MGP_CBAJ_G0032755.1 mouse_genomes_project 7 143062407 143069442 + MGP_CBAJ_P0086584 Inpp5f protein_coding protein_coding MGP_CBAJ_T0081436.1 MGP_CBAJ_G0031397.1 mouse_genomes_project 7 17407560 17412957 + MGP_CBAJ_P0081436 Igfl3 protein_coding protein_coding MGP_CBAJ_T0085124.1 MGP_CBAJ_G0032392.1 mouse_genomes_project 7 115927024 115930347 - MGP_CBAJ_P0085124 protein_coding protein_coding MGP_CBAJ_T0085860.1 MGP_CBAJ_G0032628.1 mouse_genomes_project 7 136184324 136281665 + MGP_CBAJ_P0085860 Cacng3 protein_coding protein_coding MGP_CBAJ_T0085861.1 MGP_CBAJ_G0032628.1 mouse_genomes_project 7 136185223 136280693 + MGP_CBAJ_P0085861 Cacng3 protein_coding protein_coding MGP_CBAJ_T0085862.1 MGP_CBAJ_G0032628.1 mouse_genomes_project 7 136185250 136280812 + MGP_CBAJ_P0085862 Cacng3 protein_coding protein_coding MGP_CBAJ_T0015544.1 MGP_CBAJ_G0013656.1 mouse_genomes_project 7 37750669 37752932 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008872.1 MGP_CBAJ_G0007144.1 mouse_genomes_project 7 108935200 108958415 - Gm15506 lincRNA lincRNA MGP_CBAJ_T0082005.1 MGP_CBAJ_G0031568.1 mouse_genomes_project 7 27795021 27803165 - MGP_CBAJ_P0082005 Egln2 protein_coding protein_coding MGP_CBAJ_T0082006.1 MGP_CBAJ_G0031568.1 mouse_genomes_project 7 27795022 27797234 - Egln2 protein_coding processed_transcript MGP_CBAJ_T0082007.1 MGP_CBAJ_G0031568.1 mouse_genomes_project 7 27795351 27802776 - MGP_CBAJ_P0082007 Egln2 protein_coding protein_coding MGP_CBAJ_T0082008.1 MGP_CBAJ_G0031568.1 mouse_genomes_project 7 27801895 27802645 - Egln2 protein_coding processed_transcript MGP_CBAJ_T0102122.1 MGP_CBAJ_G0040151.1 mouse_genomes_project 7 41092226 41100585 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099483.1 MGP_CBAJ_G0037738.1 mouse_genomes_project 7 40401609 40401715 - Gm22302 snRNA snRNA MGP_CBAJ_T0015691.1 MGP_CBAJ_G0013803.1 mouse_genomes_project 7 141182332 141183270 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0085035.1 MGP_CBAJ_G0032330.1 mouse_genomes_project 7 114617943 114618897 - MGP_CBAJ_P0085035 Olfr616 protein_coding protein_coding MGP_CBAJ_T0082250.1 MGP_CBAJ_G0031631.1 mouse_genomes_project 7 29796569 29814687 + MGP_CBAJ_P0082250 Rinl protein_coding protein_coding MGP_CBAJ_T0081915.1 MGP_CBAJ_G0031541.1 mouse_genomes_project 7 25818597 25821913 + MGP_CBAJ_P0081915 B3gnt8 protein_coding protein_coding MGP_CBAJ_T0081916.1 MGP_CBAJ_G0031541.1 mouse_genomes_project 7 25821124 25828588 + MGP_CBAJ_P0081916 B3gnt8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081917.1 MGP_CBAJ_G0031541.1 mouse_genomes_project 7 25821125 25822980 + MGP_CBAJ_P0081917 B3gnt8 protein_coding protein_coding MGP_CBAJ_T0081918.1 MGP_CBAJ_G0031541.1 mouse_genomes_project 7 25821129 25822973 + B3gnt8 protein_coding retained_intron MGP_CBAJ_T0005154.1 MGP_CBAJ_G0004377.1 mouse_genomes_project 7 87691239 87692578 + Gm44706 antisense antisense MGP_CBAJ_T0085305.1 MGP_CBAJ_G0032476.1 mouse_genomes_project 7 119738574 119739507 + MGP_CBAJ_P0085305 Olfr476 protein_coding protein_coding MGP_CBAJ_T0010774.1 MGP_CBAJ_G0008912.1 mouse_genomes_project 7 71139218 71139296 - Gm25249 miRNA miRNA MGP_CBAJ_T0015577.1 MGP_CBAJ_G0013689.1 mouse_genomes_project 7 47585133 47585438 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015661.1 MGP_CBAJ_G0013773.1 mouse_genomes_project 7 115126071 115129437 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0083099.1 MGP_CBAJ_G0031831.1 mouse_genomes_project 7 48313649 48329414 + MGP_CBAJ_P0083099 Syt3 protein_coding protein_coding MGP_CBAJ_T0083100.1 MGP_CBAJ_G0031831.1 mouse_genomes_project 7 48313674 48314995 + Syt3 protein_coding processed_transcript MGP_CBAJ_T0083101.1 MGP_CBAJ_G0031831.1 mouse_genomes_project 7 48313701 48329571 + MGP_CBAJ_P0083101 Syt3 protein_coding protein_coding MGP_CBAJ_T0083102.1 MGP_CBAJ_G0031831.1 mouse_genomes_project 7 48314151 48315597 + MGP_CBAJ_P0083102 Syt3 protein_coding protein_coding MGP_CBAJ_T0083103.1 MGP_CBAJ_G0031831.1 mouse_genomes_project 7 48314151 48315667 + MGP_CBAJ_P0083103 Syt3 protein_coding protein_coding MGP_CBAJ_T0083104.1 MGP_CBAJ_G0031831.1 mouse_genomes_project 7 48314415 48329148 + MGP_CBAJ_P0083104 Syt3 protein_coding protein_coding MGP_CBAJ_T0085314.1 MGP_CBAJ_G0032485.1 mouse_genomes_project 7 120062595 120063540 - MGP_CBAJ_P0085314 Olfr488 protein_coding protein_coding MGP_CBAJ_T0018157.1 MGP_CBAJ_G0015431.1 mouse_genomes_project 7 140744259 140752962 - Gm9967 processed_transcript antisense MGP_CBAJ_T0018158.1 MGP_CBAJ_G0015431.1 mouse_genomes_project 7 140749883 140752950 - Gm9967 processed_transcript antisense MGP_CBAJ_T0018159.1 MGP_CBAJ_G0015431.1 mouse_genomes_project 7 140751148 140753002 - Gm9967 processed_transcript retained_intron MGP_CBAJ_T0085831.1 MGP_CBAJ_G0032622.1 mouse_genomes_project 7 135557397 135585093 - MGP_CBAJ_P0085831 Palb2 protein_coding protein_coding MGP_CBAJ_T0085832.1 MGP_CBAJ_G0032622.1 mouse_genomes_project 7 135557397 135585028 - MGP_CBAJ_P0085832 Palb2 protein_coding protein_coding MGP_CBAJ_T0085833.1 MGP_CBAJ_G0032622.1 mouse_genomes_project 7 135557397 135585130 - MGP_CBAJ_P0085833 Palb2 protein_coding protein_coding MGP_CBAJ_T0085834.1 MGP_CBAJ_G0032622.1 mouse_genomes_project 7 135557400 135562176 - Palb2 protein_coding retained_intron MGP_CBAJ_T0085835.1 MGP_CBAJ_G0032622.1 mouse_genomes_project 7 135557402 135576629 - MGP_CBAJ_P0085835 Palb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085836.1 MGP_CBAJ_G0032622.1 mouse_genomes_project 7 135561707 135585072 - MGP_CBAJ_P0085836 Palb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085837.1 MGP_CBAJ_G0032622.1 mouse_genomes_project 7 135561707 135585101 - MGP_CBAJ_P0085837 Palb2 protein_coding protein_coding MGP_CBAJ_T0085838.1 MGP_CBAJ_G0032622.1 mouse_genomes_project 7 135577765 135585103 - Palb2 protein_coding retained_intron MGP_CBAJ_T0085839.1 MGP_CBAJ_G0032622.1 mouse_genomes_project 7 135583024 135585169 - Palb2 protein_coding retained_intron MGP_CBAJ_T0102110.1 MGP_CBAJ_G0040139.1 mouse_genomes_project 7 32811015 32813215 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015557.1 MGP_CBAJ_G0013669.1 mouse_genomes_project 7 44435745 44439124 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0086963.1 MGP_CBAJ_G0032860.1 mouse_genomes_project 7 156404468 156424497 - MGP_CBAJ_P0086963 Zfp941 protein_coding protein_coding MGP_CBAJ_T0086964.1 MGP_CBAJ_G0032860.1 mouse_genomes_project 7 156406752 156424451 - MGP_CBAJ_P0086964 Zfp941 protein_coding protein_coding MGP_CBAJ_T0086965.1 MGP_CBAJ_G0032860.1 mouse_genomes_project 7 156420782 156424465 - Zfp941 protein_coding processed_transcript MGP_CBAJ_T0086953.1 MGP_CBAJ_G0032850.1 mouse_genomes_project 7 156020502 156021493 + MGP_CBAJ_P0086953 Olfr535 protein_coding protein_coding MGP_CBAJ_T0015574.1 MGP_CBAJ_G0013686.1 mouse_genomes_project 7 47027679 47027944 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0102172.1 MGP_CBAJ_G0040201.1 mouse_genomes_project 7 93725021 94320730 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0084026.1 MGP_CBAJ_G0032049.1 mouse_genomes_project 7 86551674 86561538 + MGP_CBAJ_P0084026 Mrps11 protein_coding protein_coding MGP_CBAJ_T0084027.1 MGP_CBAJ_G0032049.1 mouse_genomes_project 7 86551868 86559792 + Mrps11 protein_coding retained_intron MGP_CBAJ_T0084028.1 MGP_CBAJ_G0032049.1 mouse_genomes_project 7 86551910 86557969 + Mrps11 protein_coding retained_intron MGP_CBAJ_T0084029.1 MGP_CBAJ_G0032049.1 mouse_genomes_project 7 86551911 86561538 + MGP_CBAJ_P0084029 Mrps11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084030.1 MGP_CBAJ_G0032049.1 mouse_genomes_project 7 86551925 86559479 + Mrps11 protein_coding retained_intron MGP_CBAJ_T0084031.1 MGP_CBAJ_G0032049.1 mouse_genomes_project 7 86551926 86557861 + Mrps11 protein_coding retained_intron MGP_CBAJ_T0087091.1 MGP_CBAJ_G0032892.1 mouse_genomes_project 7 156964583 156995143 - MGP_CBAJ_P0087091 Deaf1 protein_coding protein_coding MGP_CBAJ_T0087092.1 MGP_CBAJ_G0032892.1 mouse_genomes_project 7 156964593 156991893 - MGP_CBAJ_P0087092 Deaf1 protein_coding unknown_likely_coding MGP_CBAJ_T0102153.1 MGP_CBAJ_G0040182.1 mouse_genomes_project 7 52422767 52571837 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085392.1 MGP_CBAJ_G0032522.1 mouse_genomes_project 7 121992795 122012616 - MGP_CBAJ_P0085392 Tmem41b protein_coding protein_coding MGP_CBAJ_T0085393.1 MGP_CBAJ_G0032522.1 mouse_genomes_project 7 121996058 122005516 - Tmem41b protein_coding retained_intron MGP_CBAJ_T0085394.1 MGP_CBAJ_G0032522.1 mouse_genomes_project 7 122003167 122012696 - MGP_CBAJ_P0085394 Tmem41b protein_coding nonsense_mediated_decay MGP_CBAJ_T0085395.1 MGP_CBAJ_G0032522.1 mouse_genomes_project 7 122003167 122012809 - MGP_CBAJ_P0085395 Tmem41b protein_coding nonsense_mediated_decay MGP_CBAJ_T0085396.1 MGP_CBAJ_G0032522.1 mouse_genomes_project 7 122003234 122012783 - MGP_CBAJ_P0085396 Tmem41b protein_coding nonsense_mediated_decay MGP_CBAJ_T0085397.1 MGP_CBAJ_G0032522.1 mouse_genomes_project 7 122006576 122012793 - Tmem41b protein_coding retained_intron MGP_CBAJ_T0011552.1 MGP_CBAJ_G0009690.1 mouse_genomes_project 7 11566239 11566507 + Gm23499 misc_RNA misc_RNA MGP_CBAJ_T0015647.1 MGP_CBAJ_G0013759.1 mouse_genomes_project 7 108689044 108689284 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0082367.1 MGP_CBAJ_G0031655.1 mouse_genomes_project 7 31025037 31039551 + MGP_CBAJ_P0082367 Zfp84 protein_coding protein_coding MGP_CBAJ_T0085921.1 MGP_CBAJ_G0032639.1 mouse_genomes_project 7 139367241 139394582 + MGP_CBAJ_P0085921 Il4ra protein_coding protein_coding MGP_CBAJ_T0085922.1 MGP_CBAJ_G0032639.1 mouse_genomes_project 7 139367392 139387390 + Il4ra protein_coding retained_intron MGP_CBAJ_T0085923.1 MGP_CBAJ_G0032639.1 mouse_genomes_project 7 139367392 139382333 + MGP_CBAJ_P0085923 Il4ra protein_coding protein_coding MGP_CBAJ_T0085924.1 MGP_CBAJ_G0032639.1 mouse_genomes_project 7 139367397 139385107 + MGP_CBAJ_P0085924 Il4ra protein_coding protein_coding MGP_CBAJ_T0085925.1 MGP_CBAJ_G0032639.1 mouse_genomes_project 7 139367408 139393075 + MGP_CBAJ_P0085925 Il4ra protein_coding nonsense_mediated_decay MGP_CBAJ_T0081151.1 MGP_CBAJ_G0031304.1 mouse_genomes_project 7 10672855 10689240 - MGP_CBAJ_P0081151 Vmn2r54 protein_coding protein_coding MGP_CBAJ_T0083138.1 MGP_CBAJ_G0031836.1 mouse_genomes_project 7 48455629 48462689 + MGP_CBAJ_P0083138 Fam71e1 protein_coding protein_coding MGP_CBAJ_T0083139.1 MGP_CBAJ_G0031836.1 mouse_genomes_project 7 48455636 48461854 + Fam71e1 protein_coding retained_intron MGP_CBAJ_T0083140.1 MGP_CBAJ_G0031836.1 mouse_genomes_project 7 48455647 48456197 + MGP_CBAJ_P0083140 Fam71e1 protein_coding protein_coding MGP_CBAJ_T0083141.1 MGP_CBAJ_G0031836.1 mouse_genomes_project 7 48455706 48462682 + MGP_CBAJ_P0083141 Fam71e1 protein_coding protein_coding MGP_CBAJ_T0083142.1 MGP_CBAJ_G0031836.1 mouse_genomes_project 7 48455716 48462682 + MGP_CBAJ_P0083142 Fam71e1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083143.1 MGP_CBAJ_G0031836.1 mouse_genomes_project 7 48455720 48463035 + Fam71e1 protein_coding retained_intron MGP_CBAJ_T0083144.1 MGP_CBAJ_G0031836.1 mouse_genomes_project 7 48455720 48457055 + Fam71e1 protein_coding retained_intron MGP_CBAJ_T0083145.1 MGP_CBAJ_G0031836.1 mouse_genomes_project 7 48455742 48461883 + Fam71e1 protein_coding retained_intron MGP_CBAJ_T0083146.1 MGP_CBAJ_G0031836.1 mouse_genomes_project 7 48461938 48462681 + Fam71e1 protein_coding processed_transcript MGP_CBAJ_T0082580.1 MGP_CBAJ_G0031704.1 mouse_genomes_project 7 32064003 32066240 - MGP_CBAJ_P0082580 Etv2 protein_coding protein_coding MGP_CBAJ_T0005167.1 MGP_CBAJ_G0004387.1 mouse_genomes_project 7 98673371 98674733 + Prss23os antisense antisense MGP_CBAJ_T0005168.1 MGP_CBAJ_G0004387.1 mouse_genomes_project 7 98673387 98673856 + Prss23os antisense antisense MGP_CBAJ_T0015516.1 MGP_CBAJ_G0013628.1 mouse_genomes_project 7 25792935 25793512 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099490.1 MGP_CBAJ_G0037745.1 mouse_genomes_project 7 58037495 58037603 + Gm22444 snRNA snRNA MGP_CBAJ_T0081141.1 MGP_CBAJ_G0031299.1 mouse_genomes_project 7 10400474 10401470 - MGP_CBAJ_P0081141 Vmn1r83 protein_coding protein_coding MGP_CBAJ_T0015504.1 MGP_CBAJ_G0013616.1 mouse_genomes_project 7 18252296 18252866 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099485.1 MGP_CBAJ_G0037740.1 mouse_genomes_project 7 42496491 42496602 + Gm26327 snRNA snRNA MGP_CBAJ_T0099480.1 MGP_CBAJ_G0037735.1 mouse_genomes_project 7 18761443 18761603 + Gm25134 snRNA snRNA MGP_CBAJ_T0083006.1 MGP_CBAJ_G0031801.1 mouse_genomes_project 7 47096311 47115794 + MGP_CBAJ_P0083006 Gm45233 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083008.1 MGP_CBAJ_G0031801.1 mouse_genomes_project 7 47096314 47115877 + MGP_CBAJ_P0083008 Gm45233 protein_coding nonsense_mediated_decay MGP_CBAJ_T0102096.1 MGP_CBAJ_G0040126.1 mouse_genomes_project 7 14618299 14624126 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0086946.1 MGP_CBAJ_G0032843.1 mouse_genomes_project 7 155840491 155841541 + MGP_CBAJ_P0086946 Olfr525 protein_coding protein_coding MGP_CBAJ_T0084253.1 MGP_CBAJ_G0032088.1 mouse_genomes_project 7 88795730 88909306 - MGP_CBAJ_P0084253 Iqgap1 protein_coding protein_coding MGP_CBAJ_T0084254.1 MGP_CBAJ_G0032088.1 mouse_genomes_project 7 88813665 88817092 - MGP_CBAJ_P0084254 Iqgap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084255.1 MGP_CBAJ_G0032088.1 mouse_genomes_project 7 88827895 88830672 - Iqgap1 protein_coding retained_intron MGP_CBAJ_T0084256.1 MGP_CBAJ_G0032088.1 mouse_genomes_project 7 88839419 88909153 - Iqgap1 protein_coding retained_intron MGP_CBAJ_T0084257.1 MGP_CBAJ_G0032088.1 mouse_genomes_project 7 88850368 88909171 - Iqgap1 protein_coding retained_intron MGP_CBAJ_T0084258.1 MGP_CBAJ_G0032088.1 mouse_genomes_project 7 88860921 88923399 - MGP_CBAJ_P0084258 Iqgap1 protein_coding protein_coding MGP_CBAJ_T0084259.1 MGP_CBAJ_G0032088.1 mouse_genomes_project 7 88866741 88932478 - MGP_CBAJ_P0084259 Iqgap1 protein_coding protein_coding MGP_CBAJ_T0084260.1 MGP_CBAJ_G0032088.1 mouse_genomes_project 7 88900534 88909162 - Iqgap1 protein_coding retained_intron MGP_CBAJ_T0085024.1 MGP_CBAJ_G0032319.1 mouse_genomes_project 7 114351276 114352224 + MGP_CBAJ_P0085024 Olfr599 protein_coding protein_coding MGP_CBAJ_T0102066.1 MGP_CBAJ_G0040096.1 mouse_genomes_project 7 10153356 10154634 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085801.1 MGP_CBAJ_G0032615.1 mouse_genomes_project 7 135111988 135148441 + MGP_CBAJ_P0085801 Scnn1g protein_coding protein_coding MGP_CBAJ_T0085743.1 MGP_CBAJ_G0032598.1 mouse_genomes_project 7 133389247 133440429 + Abca14 protein_coding processed_transcript MGP_CBAJ_T0085744.1 MGP_CBAJ_G0032598.1 mouse_genomes_project 7 133389250 133528496 + MGP_CBAJ_P0085744 Abca14 protein_coding protein_coding MGP_CBAJ_T0085745.1 MGP_CBAJ_G0032598.1 mouse_genomes_project 7 133389290 133398177 + Abca14 protein_coding retained_intron MGP_CBAJ_T0085746.1 MGP_CBAJ_G0032598.1 mouse_genomes_project 7 133389293 133401459 + Abca14 protein_coding processed_transcript MGP_CBAJ_T0087002.1 MGP_CBAJ_G0032869.1 mouse_genomes_project 7 156530689 156538328 + MGP_CBAJ_P0087002 Nlrp6 protein_coding protein_coding MGP_CBAJ_T0087003.1 MGP_CBAJ_G0032869.1 mouse_genomes_project 7 156530689 156538980 + MGP_CBAJ_P0087003 Nlrp6 protein_coding protein_coding MGP_CBAJ_T0087004.1 MGP_CBAJ_G0032869.1 mouse_genomes_project 7 156530858 156537337 + MGP_CBAJ_P0087004 Nlrp6 protein_coding protein_coding MGP_CBAJ_T0087005.1 MGP_CBAJ_G0032869.1 mouse_genomes_project 7 156531893 156532643 + Nlrp6 protein_coding retained_intron MGP_CBAJ_T0081138.1 MGP_CBAJ_G0031297.1 mouse_genomes_project 7 10337469 10338390 - MGP_CBAJ_P0081138 Vmn1r81 protein_coding protein_coding MGP_CBAJ_T0002249.1 MGP_CBAJ_G0002163.1 mouse_genomes_project 7 102203959 102207590 + TEC TEC MGP_CBAJ_T0018180.1 MGP_CBAJ_G0015444.1 mouse_genomes_project 7 158395702 158412252 - Nctc1 processed_transcript antisense MGP_CBAJ_T0018181.1 MGP_CBAJ_G0015444.1 mouse_genomes_project 7 158407355 158412252 - Nctc1 processed_transcript retained_intron MGP_CBAJ_T0015515.1 MGP_CBAJ_G0013627.1 mouse_genomes_project 7 25634119 25635431 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0083287.1 MGP_CBAJ_G0031876.1 mouse_genomes_project 7 49228887 49243889 + MGP_CBAJ_P0083287 Slc17a7 protein_coding protein_coding MGP_CBAJ_T0083047.1 MGP_CBAJ_G0031813.1 mouse_genomes_project 7 47411525 47426574 + MGP_CBAJ_P0083047 Klk13 protein_coding protein_coding MGP_CBAJ_T0083048.1 MGP_CBAJ_G0031813.1 mouse_genomes_project 7 47412357 47420311 + MGP_CBAJ_P0083048 Klk13 protein_coding protein_coding MGP_CBAJ_T0083049.1 MGP_CBAJ_G0031813.1 mouse_genomes_project 7 47413917 47422913 + MGP_CBAJ_P0083049 Klk13 protein_coding protein_coding MGP_CBAJ_T0083666.1 MGP_CBAJ_G0031979.1 mouse_genomes_project 7 60163701 60609540 + Luzp2 protein_coding retained_intron MGP_CBAJ_T0083667.1 MGP_CBAJ_G0031979.1 mouse_genomes_project 7 60163818 60629001 + MGP_CBAJ_P0083667 Luzp2 protein_coding protein_coding MGP_CBAJ_T0086283.1 MGP_CBAJ_G0032697.1 mouse_genomes_project 7 141258144 141258800 - Sept1 protein_coding retained_intron MGP_CBAJ_T0086284.1 MGP_CBAJ_G0032697.1 mouse_genomes_project 7 141258432 141279220 - MGP_CBAJ_P0086284 Sept1 protein_coding protein_coding MGP_CBAJ_T0086285.1 MGP_CBAJ_G0032697.1 mouse_genomes_project 7 141258445 141264916 - MGP_CBAJ_P0086285 Sept1 protein_coding protein_coding MGP_CBAJ_T0086286.1 MGP_CBAJ_G0032697.1 mouse_genomes_project 7 141258640 141263484 - Sept1 protein_coding retained_intron MGP_CBAJ_T0086287.1 MGP_CBAJ_G0032697.1 mouse_genomes_project 7 141259559 141264835 - MGP_CBAJ_P0086287 Sept1 protein_coding protein_coding MGP_CBAJ_T0086288.1 MGP_CBAJ_G0032697.1 mouse_genomes_project 7 141263172 141278995 - MGP_CBAJ_P0086288 Sept1 protein_coding protein_coding MGP_CBAJ_T0086289.1 MGP_CBAJ_G0032697.1 mouse_genomes_project 7 141263209 141264871 - Sept1 protein_coding retained_intron MGP_CBAJ_T0086290.1 MGP_CBAJ_G0032697.1 mouse_genomes_project 7 141263416 141264676 - Sept1 protein_coding processed_transcript MGP_CBAJ_T0086291.1 MGP_CBAJ_G0032697.1 mouse_genomes_project 7 141278766 141279479 - Sept1 protein_coding retained_intron MGP_CBAJ_T0084979.1 MGP_CBAJ_G0032278.1 mouse_genomes_project 7 113349441 113350638 - MGP_CBAJ_P0084979 Olfr545 protein_coding protein_coding MGP_CBAJ_T0081100.1 MGP_CBAJ_G0031271.1 mouse_genomes_project 7 3935391 3936445 - MGP_CBAJ_P0081100 Olfr1349 protein_coding protein_coding MGP_CBAJ_T0081972.1 MGP_CBAJ_G0031554.1 mouse_genomes_project 7 26602776 26613629 + MGP_CBAJ_P0081972 protein_coding protein_coding MGP_CBAJ_T0082987.1 MGP_CBAJ_G0031793.1 mouse_genomes_project 7 46972674 46981032 + Siglecf protein_coding retained_intron MGP_CBAJ_T0082988.1 MGP_CBAJ_G0031793.1 mouse_genomes_project 7 46972674 46981034 + MGP_CBAJ_P0082988 Siglecf protein_coding protein_coding MGP_CBAJ_T0082989.1 MGP_CBAJ_G0031793.1 mouse_genomes_project 7 46972716 46973177 + Siglecf protein_coding processed_transcript MGP_CBAJ_T0082990.1 MGP_CBAJ_G0031793.1 mouse_genomes_project 7 46972741 46981095 + MGP_CBAJ_P0082990 Siglecf protein_coding protein_coding MGP_CBAJ_T0082991.1 MGP_CBAJ_G0031793.1 mouse_genomes_project 7 46972855 46980853 + MGP_CBAJ_P0082991 Siglecf protein_coding protein_coding MGP_CBAJ_T0082992.1 MGP_CBAJ_G0031793.1 mouse_genomes_project 7 46972881 46978182 + MGP_CBAJ_P0082992 Siglecf protein_coding protein_coding MGP_CBAJ_T0081014.1 MGP_CBAJ_G0031228.1 mouse_genomes_project 7 2087782 2125285 + MGP_CBAJ_P0081014 Isoc2a protein_coding protein_coding MGP_CBAJ_T0085852.1 MGP_CBAJ_G0032627.1 mouse_genomes_project 7 135780491 136145246 + MGP_CBAJ_P0085852 Prkcb protein_coding nonsense_mediated_decay MGP_CBAJ_T0085853.1 MGP_CBAJ_G0032627.1 mouse_genomes_project 7 135781037 136139466 + MGP_CBAJ_P0085853 Prkcb protein_coding protein_coding MGP_CBAJ_T0085854.1 MGP_CBAJ_G0032627.1 mouse_genomes_project 7 135781049 136145249 + MGP_CBAJ_P0085854 Prkcb protein_coding protein_coding MGP_CBAJ_T0085855.1 MGP_CBAJ_G0032627.1 mouse_genomes_project 7 135781768 135924016 + Prkcb protein_coding processed_transcript MGP_CBAJ_T0085856.1 MGP_CBAJ_G0032627.1 mouse_genomes_project 7 135914988 135960182 + Prkcb protein_coding processed_transcript MGP_CBAJ_T0085857.1 MGP_CBAJ_G0032627.1 mouse_genomes_project 7 136100791 136103585 + Prkcb protein_coding retained_intron MGP_CBAJ_T0085858.1 MGP_CBAJ_G0032627.1 mouse_genomes_project 7 136106830 136138889 + Prkcb protein_coding processed_transcript MGP_CBAJ_T0085859.1 MGP_CBAJ_G0032627.1 mouse_genomes_project 7 136144295 136145249 + Prkcb protein_coding retained_intron MGP_CBAJ_T0002236.1 MGP_CBAJ_G0002150.1 mouse_genomes_project 7 87380971 87383082 + TEC TEC MGP_CBAJ_T0083252.1 MGP_CBAJ_G0031859.1 mouse_genomes_project 7 49001687 49019814 - MGP_CBAJ_P0083252 Cpt1c protein_coding protein_coding MGP_CBAJ_T0087244.1 MGP_CBAJ_G0032922.1 mouse_genomes_project 7 158128062 158129094 + MGP_CBAJ_P0087244 protein_coding protein_coding MGP_CBAJ_T0084924.1 MGP_CBAJ_G0032265.1 mouse_genomes_project 7 112833134 112854944 + MGP_CBAJ_P0084924 Xndc1 protein_coding protein_coding MGP_CBAJ_T0084925.1 MGP_CBAJ_G0032265.1 mouse_genomes_project 7 112833143 112851340 + Xndc1 protein_coding retained_intron MGP_CBAJ_T0084926.1 MGP_CBAJ_G0032265.1 mouse_genomes_project 7 112833145 112838773 + Xndc1 protein_coding processed_transcript MGP_CBAJ_T0084927.1 MGP_CBAJ_G0032265.1 mouse_genomes_project 7 112833219 112848945 + MGP_CBAJ_P0084927 Xndc1 protein_coding protein_coding MGP_CBAJ_T0084930.1 MGP_CBAJ_G0032265.1 mouse_genomes_project 7 112833384 112854263 + MGP_CBAJ_P0084930 Xndc1 protein_coding protein_coding MGP_CBAJ_T0084934.1 MGP_CBAJ_G0032265.1 mouse_genomes_project 7 112846965 112850295 + Xndc1 protein_coding retained_intron MGP_CBAJ_T0084935.1 MGP_CBAJ_G0032265.1 mouse_genomes_project 7 112849812 112854947 + MGP_CBAJ_P0084935 Xndc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084936.1 MGP_CBAJ_G0032265.1 mouse_genomes_project 7 112852236 112853773 + Xndc1 protein_coding processed_transcript MGP_CBAJ_T0084937.1 MGP_CBAJ_G0032265.1 mouse_genomes_project 7 112852239 112853703 + Xndc1 protein_coding retained_intron MGP_CBAJ_T0084577.1 MGP_CBAJ_G0032194.1 mouse_genomes_project 7 107667620 107693658 - MGP_CBAJ_P0084577 Aamdc protein_coding protein_coding MGP_CBAJ_T0084578.1 MGP_CBAJ_G0032194.1 mouse_genomes_project 7 107667623 107697473 - MGP_CBAJ_P0084578 Aamdc protein_coding protein_coding MGP_CBAJ_T0084579.1 MGP_CBAJ_G0032194.1 mouse_genomes_project 7 107667628 107697477 - MGP_CBAJ_P0084579 Aamdc protein_coding protein_coding MGP_CBAJ_T0084580.1 MGP_CBAJ_G0032194.1 mouse_genomes_project 7 107667629 107697392 - MGP_CBAJ_P0084580 Aamdc protein_coding nonsense_mediated_decay MGP_CBAJ_T0084581.1 MGP_CBAJ_G0032194.1 mouse_genomes_project 7 107667636 107697480 - Aamdc protein_coding processed_transcript MGP_CBAJ_T0084582.1 MGP_CBAJ_G0032194.1 mouse_genomes_project 7 107667641 107697491 - MGP_CBAJ_P0084582 Aamdc protein_coding protein_coding MGP_CBAJ_T0084583.1 MGP_CBAJ_G0032194.1 mouse_genomes_project 7 107667831 107697435 - MGP_CBAJ_P0084583 Aamdc protein_coding protein_coding MGP_CBAJ_T0084584.1 MGP_CBAJ_G0032194.1 mouse_genomes_project 7 107667837 107697436 - MGP_CBAJ_P0084584 Aamdc protein_coding nonsense_mediated_decay MGP_CBAJ_T0084585.1 MGP_CBAJ_G0032194.1 mouse_genomes_project 7 107667854 107697468 - MGP_CBAJ_P0084585 Aamdc protein_coding protein_coding MGP_CBAJ_T0084586.1 MGP_CBAJ_G0032194.1 mouse_genomes_project 7 107667959 107697413 - MGP_CBAJ_P0084586 Aamdc protein_coding protein_coding MGP_CBAJ_T0084587.1 MGP_CBAJ_G0032194.1 mouse_genomes_project 7 107668004 107697376 - MGP_CBAJ_P0084587 Aamdc protein_coding protein_coding MGP_CBAJ_T0084588.1 MGP_CBAJ_G0032194.1 mouse_genomes_project 7 107693904 107696223 - Aamdc protein_coding retained_intron MGP_CBAJ_T0011571.1 MGP_CBAJ_G0009709.1 mouse_genomes_project 7 151642599 151642907 - Gm24444 misc_RNA misc_RNA MGP_CBAJ_T0010730.1 MGP_CBAJ_G0008868.1 mouse_genomes_project 7 30178149 30178215 + Gm44408 miRNA miRNA MGP_CBAJ_T0008756.1 MGP_CBAJ_G0007063.1 mouse_genomes_project 7 43315282 43423875 - Gm28807 lincRNA lincRNA MGP_CBAJ_T0102184.1 MGP_CBAJ_G0040213.1 mouse_genomes_project 7 94549706 94550026 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081993.1 MGP_CBAJ_G0031563.1 mouse_genomes_project 7 27271973 27288698 + MGP_CBAJ_P0081993 Cyp2g1 protein_coding protein_coding MGP_CBAJ_T0081994.1 MGP_CBAJ_G0031563.1 mouse_genomes_project 7 27280969 27286008 + Cyp2g1 protein_coding retained_intron MGP_CBAJ_T0087186.1 MGP_CBAJ_G0032904.1 mouse_genomes_project 7 157175735 157178931 - MGP_CBAJ_P0087186 Polr2l protein_coding protein_coding MGP_CBAJ_T0085815.1 MGP_CBAJ_G0032619.1 mouse_genomes_project 7 135465509 135511383 - Ears2 protein_coding retained_intron MGP_CBAJ_T0085816.1 MGP_CBAJ_G0032619.1 mouse_genomes_project 7 135467117 135511442 - Ears2 protein_coding retained_intron MGP_CBAJ_T0085817.1 MGP_CBAJ_G0032619.1 mouse_genomes_project 7 135467117 135511635 - MGP_CBAJ_P0085817 Ears2 protein_coding protein_coding MGP_CBAJ_T0085090.1 MGP_CBAJ_G0032375.1 mouse_genomes_project 7 115449312 115463840 + MGP_CBAJ_P0085090 protein_coding protein_coding MGP_CBAJ_T0085093.1 MGP_CBAJ_G0032375.1 mouse_genomes_project 7 115452477 115463548 + MGP_CBAJ_P0085093 protein_coding protein_coding MGP_CBAJ_T0085094.1 MGP_CBAJ_G0032375.1 mouse_genomes_project 7 115452477 115463548 + MGP_CBAJ_P0085094 protein_coding protein_coding MGP_CBAJ_T0083750.1 MGP_CBAJ_G0031992.1 mouse_genomes_project 7 65505430 65540443 - MGP_CBAJ_P0083750 Gm38393 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083751.1 MGP_CBAJ_G0031992.1 mouse_genomes_project 7 65505430 65540443 - MGP_CBAJ_P0083751 Gm38393 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083752.1 MGP_CBAJ_G0031992.1 mouse_genomes_project 7 65509050 65513019 - Gm38393 protein_coding processed_transcript MGP_CBAJ_T0083753.1 MGP_CBAJ_G0031992.1 mouse_genomes_project 7 65512852 65513275 - Gm38393 protein_coding processed_transcript MGP_CBAJ_T0015518.1 MGP_CBAJ_G0013630.1 mouse_genomes_project 7 26031254 26031542 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005065.1 MGP_CBAJ_G0004314.1 mouse_genomes_project 7 4422336 4448374 - Zim3 antisense antisense MGP_CBAJ_T0005066.1 MGP_CBAJ_G0004314.1 mouse_genomes_project 7 4430032 4447407 - Zim3 antisense antisense MGP_CBAJ_T0005067.1 MGP_CBAJ_G0004314.1 mouse_genomes_project 7 4448014 4449131 - Zim3 antisense antisense MGP_CBAJ_T0083180.1 MGP_CBAJ_G0031843.1 mouse_genomes_project 7 48595806 48661987 - MGP_CBAJ_P0083180 Myh14 protein_coding protein_coding MGP_CBAJ_T0083181.1 MGP_CBAJ_G0031843.1 mouse_genomes_project 7 48595806 48661987 - MGP_CBAJ_P0083181 Myh14 protein_coding protein_coding MGP_CBAJ_T0102176.1 MGP_CBAJ_G0040205.1 mouse_genomes_project 7 94168096 94170631 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0101182.1 MGP_CBAJ_G0039351.1 mouse_genomes_project 7 140037558 140041929 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101183.1 MGP_CBAJ_G0039351.1 mouse_genomes_project 7 140039170 140040127 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0015513.1 MGP_CBAJ_G0013625.1 mouse_genomes_project 7 25603802 25604476 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0081131.1 MGP_CBAJ_G0031290.1 mouse_genomes_project 7 9610286 9611207 - MGP_CBAJ_P0081131 Vmn1r72 protein_coding protein_coding MGP_CBAJ_T0100764.1 MGP_CBAJ_G0039019.1 mouse_genomes_project 7 124925665 124925795 - Gm24154 snoRNA snoRNA MGP_CBAJ_T0083004.1 MGP_CBAJ_G0031800.1 mouse_genomes_project 7 47096266 47110090 + MGP_CBAJ_P0083004 Etfb protein_coding protein_coding MGP_CBAJ_T0083005.1 MGP_CBAJ_G0031800.1 mouse_genomes_project 7 47096302 47109954 + MGP_CBAJ_P0083005 Etfb protein_coding protein_coding MGP_CBAJ_T0083007.1 MGP_CBAJ_G0031800.1 mouse_genomes_project 7 47096313 47108863 + MGP_CBAJ_P0083007 Etfb protein_coding protein_coding MGP_CBAJ_T0083009.1 MGP_CBAJ_G0031800.1 mouse_genomes_project 7 47096333 47110071 + MGP_CBAJ_P0083009 Etfb protein_coding protein_coding MGP_CBAJ_T0083010.1 MGP_CBAJ_G0031800.1 mouse_genomes_project 7 47105141 47110071 + MGP_CBAJ_P0083010 Etfb protein_coding protein_coding MGP_CBAJ_T0083011.1 MGP_CBAJ_G0031800.1 mouse_genomes_project 7 47108790 47110070 + Etfb protein_coding processed_transcript MGP_CBAJ_T0083012.1 MGP_CBAJ_G0031800.1 mouse_genomes_project 7 47109325 47110073 + Etfb protein_coding processed_transcript MGP_CBAJ_T0082172.1 MGP_CBAJ_G0031609.1 mouse_genomes_project 7 29220801 29254830 - MGP_CBAJ_P0082172 Supt5 protein_coding unknown_likely_coding MGP_CBAJ_T0082173.1 MGP_CBAJ_G0031609.1 mouse_genomes_project 7 29220810 29254794 - MGP_CBAJ_P0082173 Supt5 protein_coding protein_coding MGP_CBAJ_T0081030.1 MGP_CBAJ_G0031235.1 mouse_genomes_project 7 2248358 2255649 - MGP_CBAJ_P0081030 Fiz1 protein_coding protein_coding MGP_CBAJ_T0081031.1 MGP_CBAJ_G0031235.1 mouse_genomes_project 7 2248358 2254642 - MGP_CBAJ_P0081031 Fiz1 protein_coding protein_coding MGP_CBAJ_T0081032.1 MGP_CBAJ_G0031235.1 mouse_genomes_project 7 2248358 2256093 - MGP_CBAJ_P0081032 Fiz1 protein_coding protein_coding MGP_CBAJ_T0100762.1 MGP_CBAJ_G0039017.1 mouse_genomes_project 7 122075043 122075227 + Snora23 snoRNA snoRNA MGP_CBAJ_T0002179.1 MGP_CBAJ_G0002094.1 mouse_genomes_project 7 42386320 42388691 - TEC TEC MGP_CBAJ_T0085151.1 MGP_CBAJ_G0032418.1 mouse_genomes_project 7 116713090 116741912 - MGP_CBAJ_P0085151 Fam160a2 protein_coding protein_coding MGP_CBAJ_T0085152.1 MGP_CBAJ_G0032418.1 mouse_genomes_project 7 116713090 116741934 - MGP_CBAJ_P0085152 Fam160a2 protein_coding protein_coding MGP_CBAJ_T0085154.1 MGP_CBAJ_G0032418.1 mouse_genomes_project 7 116720489 116741934 - MGP_CBAJ_P0085154 Fam160a2 protein_coding protein_coding MGP_CBAJ_T0085155.1 MGP_CBAJ_G0032418.1 mouse_genomes_project 7 116720489 116741865 - MGP_CBAJ_P0085155 Fam160a2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085156.1 MGP_CBAJ_G0032418.1 mouse_genomes_project 7 116720490 116741891 - MGP_CBAJ_P0085156 Fam160a2 protein_coding protein_coding MGP_CBAJ_T0085157.1 MGP_CBAJ_G0032418.1 mouse_genomes_project 7 116720490 116741888 - MGP_CBAJ_P0085157 Fam160a2 protein_coding protein_coding MGP_CBAJ_T0085158.1 MGP_CBAJ_G0032418.1 mouse_genomes_project 7 116720955 116723861 - Fam160a2 protein_coding retained_intron MGP_CBAJ_T0085159.1 MGP_CBAJ_G0032418.1 mouse_genomes_project 7 116727267 116730991 - Fam160a2 protein_coding retained_intron MGP_CBAJ_T0081188.1 MGP_CBAJ_G0031317.1 mouse_genomes_project 7 11135290 11136083 - Slc27a5 protein_coding processed_transcript MGP_CBAJ_T0081189.1 MGP_CBAJ_G0031317.1 mouse_genomes_project 7 11135290 11149082 - MGP_CBAJ_P0081189 Slc27a5 protein_coding protein_coding MGP_CBAJ_T0081190.1 MGP_CBAJ_G0031317.1 mouse_genomes_project 7 11135296 11149124 - MGP_CBAJ_P0081190 Slc27a5 protein_coding protein_coding MGP_CBAJ_T0081191.1 MGP_CBAJ_G0031317.1 mouse_genomes_project 7 11144049 11147493 - Slc27a5 protein_coding retained_intron MGP_CBAJ_T0081192.1 MGP_CBAJ_G0031317.1 mouse_genomes_project 7 11144049 11148609 - MGP_CBAJ_P0081192 Slc27a5 protein_coding protein_coding MGP_CBAJ_T0082608.1 MGP_CBAJ_G0031713.1 mouse_genomes_project 7 32205201 32225327 + MGP_CBAJ_P0082608 Dmkn protein_coding protein_coding MGP_CBAJ_T0082609.1 MGP_CBAJ_G0031713.1 mouse_genomes_project 7 32205208 32225326 + MGP_CBAJ_P0082609 Dmkn protein_coding protein_coding MGP_CBAJ_T0082610.1 MGP_CBAJ_G0031713.1 mouse_genomes_project 7 32205244 32225326 + MGP_CBAJ_P0082610 Dmkn protein_coding protein_coding MGP_CBAJ_T0082611.1 MGP_CBAJ_G0031713.1 mouse_genomes_project 7 32217615 32225331 + MGP_CBAJ_P0082611 Dmkn protein_coding protein_coding MGP_CBAJ_T0102155.1 MGP_CBAJ_G0040184.1 mouse_genomes_project 7 52623943 52624907 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0084773.1 MGP_CBAJ_G0032240.1 mouse_genomes_project 7 111049804 111101654 - MGP_CBAJ_P0084773 protein_coding protein_coding MGP_CBAJ_T0084774.1 MGP_CBAJ_G0032240.1 mouse_genomes_project 7 111049809 111051674 - MGP_CBAJ_P0084774 protein_coding protein_coding MGP_CBAJ_T0084775.1 MGP_CBAJ_G0032240.1 mouse_genomes_project 7 111054627 111110002 - protein_coding processed_transcript MGP_CBAJ_T0084776.1 MGP_CBAJ_G0032240.1 mouse_genomes_project 7 111066984 111128122 - protein_coding processed_transcript MGP_CBAJ_T0084777.1 MGP_CBAJ_G0032240.1 mouse_genomes_project 7 111078141 111101662 - protein_coding processed_transcript MGP_CBAJ_T0084778.1 MGP_CBAJ_G0032240.1 mouse_genomes_project 7 111083445 111101627 - MGP_CBAJ_P0084778 protein_coding protein_coding MGP_CBAJ_T0084779.1 MGP_CBAJ_G0032240.1 mouse_genomes_project 7 111083460 111127819 - protein_coding processed_transcript MGP_CBAJ_T0083083.1 MGP_CBAJ_G0031827.1 mouse_genomes_project 7 48156005 48162802 - MGP_CBAJ_P0083083 Acpt protein_coding protein_coding MGP_CBAJ_T0083084.1 MGP_CBAJ_G0031827.1 mouse_genomes_project 7 48158509 48162802 - MGP_CBAJ_P0083084 Acpt protein_coding protein_coding MGP_CBAJ_T0083085.1 MGP_CBAJ_G0031827.1 mouse_genomes_project 7 48158516 48162629 - MGP_CBAJ_P0083085 Acpt protein_coding protein_coding MGP_CBAJ_T0098086.1 MGP_CBAJ_G0036359.1 mouse_genomes_project 7 30870856 30870972 - n-R5s153 rRNA rRNA MGP_CBAJ_T0081367.1 MGP_CBAJ_G0031377.1 mouse_genomes_project 7 15790709 15798222 - MGP_CBAJ_P0081367 Fkrp protein_coding protein_coding MGP_CBAJ_T0081368.1 MGP_CBAJ_G0031377.1 mouse_genomes_project 7 15793114 15797010 - MGP_CBAJ_P0081368 Fkrp protein_coding protein_coding MGP_CBAJ_T0081369.1 MGP_CBAJ_G0031377.1 mouse_genomes_project 7 15794622 15797182 - Fkrp protein_coding retained_intron MGP_CBAJ_T0081370.1 MGP_CBAJ_G0031377.1 mouse_genomes_project 7 15796236 15798222 - Fkrp protein_coding retained_intron MGP_CBAJ_T0085058.1 MGP_CBAJ_G0032353.1 mouse_genomes_project 7 115084834 115085788 + MGP_CBAJ_P0085058 Olfr632 protein_coding protein_coding MGP_CBAJ_T0084987.1 MGP_CBAJ_G0032285.1 mouse_genomes_project 7 113485837 113486818 - MGP_CBAJ_P0084987 Olfr553 protein_coding protein_coding MGP_CBAJ_T0085863.1 MGP_CBAJ_G0032629.1 mouse_genomes_project 7 136488546 136505840 + MGP_CBAJ_P0085863 Rbbp6 protein_coding protein_coding MGP_CBAJ_T0085864.1 MGP_CBAJ_G0032629.1 mouse_genomes_project 7 136500395 136534458 + MGP_CBAJ_P0085864 Rbbp6 protein_coding protein_coding MGP_CBAJ_T0085865.1 MGP_CBAJ_G0032629.1 mouse_genomes_project 7 136500531 136514223 + MGP_CBAJ_P0085865 Rbbp6 protein_coding protein_coding MGP_CBAJ_T0085866.1 MGP_CBAJ_G0032629.1 mouse_genomes_project 7 136500749 136534458 + MGP_CBAJ_P0085866 Rbbp6 protein_coding protein_coding MGP_CBAJ_T0085867.1 MGP_CBAJ_G0032629.1 mouse_genomes_project 7 136505471 136508593 + Rbbp6 protein_coding retained_intron MGP_CBAJ_T0085868.1 MGP_CBAJ_G0032629.1 mouse_genomes_project 7 136505689 136513387 + Rbbp6 protein_coding retained_intron MGP_CBAJ_T0085869.1 MGP_CBAJ_G0032629.1 mouse_genomes_project 7 136512335 136534460 + MGP_CBAJ_P0085869 Rbbp6 protein_coding protein_coding MGP_CBAJ_T0085870.1 MGP_CBAJ_G0032629.1 mouse_genomes_project 7 136512373 136515533 + Rbbp6 protein_coding retained_intron MGP_CBAJ_T0085871.1 MGP_CBAJ_G0032629.1 mouse_genomes_project 7 136519960 136522343 + Rbbp6 protein_coding retained_intron MGP_CBAJ_T0099473.1 MGP_CBAJ_G0037728.1 mouse_genomes_project 7 2550537 2550644 - Gm23942 snRNA snRNA MGP_CBAJ_T0015564.1 MGP_CBAJ_G0013676.1 mouse_genomes_project 7 45779696 45780178 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0087461.1 MGP_CBAJ_G0032961.1 mouse_genomes_project 7 160928713 160933350 + MGP_CBAJ_P0087461 Fgf3 protein_coding protein_coding MGP_CBAJ_T0087462.1 MGP_CBAJ_G0032961.1 mouse_genomes_project 7 160929225 160935067 + MGP_CBAJ_P0087462 Fgf3 protein_coding protein_coding MGP_CBAJ_T0085632.1 MGP_CBAJ_G0032568.1 mouse_genomes_project 7 131342976 131411438 - MGP_CBAJ_P0085632 Syt17 protein_coding protein_coding MGP_CBAJ_T0085633.1 MGP_CBAJ_G0032568.1 mouse_genomes_project 7 131342979 131405178 - MGP_CBAJ_P0085633 Syt17 protein_coding protein_coding MGP_CBAJ_T0085634.1 MGP_CBAJ_G0032568.1 mouse_genomes_project 7 131342980 131404185 - Syt17 protein_coding retained_intron MGP_CBAJ_T0085635.1 MGP_CBAJ_G0032568.1 mouse_genomes_project 7 131370144 131411768 - MGP_CBAJ_P0085635 Syt17 protein_coding protein_coding MGP_CBAJ_T0082952.1 MGP_CBAJ_G0031781.1 mouse_genomes_project 7 44606325 44638926 - MGP_CBAJ_P0082952 AW146154 protein_coding protein_coding MGP_CBAJ_T0082953.1 MGP_CBAJ_G0031781.1 mouse_genomes_project 7 44608710 44609845 - AW146154 protein_coding retained_intron MGP_CBAJ_T0082954.1 MGP_CBAJ_G0031781.1 mouse_genomes_project 7 44620924 44638463 - AW146154 protein_coding processed_transcript MGP_CBAJ_T0015466.1 MGP_CBAJ_G0013578.1 mouse_genomes_project 7 2695991 2696280 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015512.1 MGP_CBAJ_G0013624.1 mouse_genomes_project 7 24921307 24921833 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098095.1 MGP_CBAJ_G0036368.1 mouse_genomes_project 7 143153599 143153717 - n-R5s158 rRNA rRNA MGP_CBAJ_T0087033.1 MGP_CBAJ_G0032881.1 mouse_genomes_project 7 156753719 156785626 + MGP_CBAJ_P0087033 Ptdss2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087034.1 MGP_CBAJ_G0032881.1 mouse_genomes_project 7 156761471 156784161 + MGP_CBAJ_P0087034 Ptdss2 protein_coding protein_coding MGP_CBAJ_T0087035.1 MGP_CBAJ_G0032881.1 mouse_genomes_project 7 156761493 156783993 + MGP_CBAJ_P0087035 Ptdss2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087036.1 MGP_CBAJ_G0032881.1 mouse_genomes_project 7 156762501 156788191 + MGP_CBAJ_P0087036 Ptdss2 protein_coding protein_coding MGP_CBAJ_T0087037.1 MGP_CBAJ_G0032881.1 mouse_genomes_project 7 156762516 156785493 + Ptdss2 protein_coding retained_intron MGP_CBAJ_T0087038.1 MGP_CBAJ_G0032881.1 mouse_genomes_project 7 156762559 156774852 + Ptdss2 protein_coding processed_transcript MGP_CBAJ_T0087039.1 MGP_CBAJ_G0032881.1 mouse_genomes_project 7 156762571 156774352 + MGP_CBAJ_P0087039 Ptdss2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087040.1 MGP_CBAJ_G0032881.1 mouse_genomes_project 7 156763653 156778321 + MGP_CBAJ_P0087040 Ptdss2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087041.1 MGP_CBAJ_G0032881.1 mouse_genomes_project 7 156763768 156774881 + Ptdss2 protein_coding processed_transcript MGP_CBAJ_T0085070.1 MGP_CBAJ_G0032365.1 mouse_genomes_project 7 115291322 115292261 + MGP_CBAJ_P0085070 Olfr646 protein_coding protein_coding MGP_CBAJ_T0005193.1 MGP_CBAJ_G0004403.1 mouse_genomes_project 7 128619580 128638229 + Gm45025 antisense antisense MGP_CBAJ_T0008712.1 MGP_CBAJ_G0007028.1 mouse_genomes_project 7 25034368 25037693 + Gm44970 lincRNA lincRNA MGP_CBAJ_T0082211.1 MGP_CBAJ_G0031620.1 mouse_genomes_project 7 29489324 29490026 + MGP_CBAJ_P0082211 Gm10053 protein_coding protein_coding MGP_CBAJ_T0083504.1 MGP_CBAJ_G0031930.1 mouse_genomes_project 7 50350271 50351444 - MGP_CBAJ_P0083504 Kcnj11 protein_coding protein_coding MGP_CBAJ_T0085147.1 MGP_CBAJ_G0032414.1 mouse_genomes_project 7 116658688 116659609 + MGP_CBAJ_P0085147 protein_coding protein_coding MGP_CBAJ_T0005228.1 MGP_CBAJ_G0004429.1 mouse_genomes_project 7 156441926 156450434 - C330022C24Rik antisense antisense MGP_CBAJ_T0008867.1 MGP_CBAJ_G0007140.1 mouse_genomes_project 7 103756697 104091112 + lincRNA lincRNA MGP_CBAJ_T0008868.1 MGP_CBAJ_G0007140.1 mouse_genomes_project 7 103756758 104520096 + lincRNA lincRNA MGP_CBAJ_T0005161.1 MGP_CBAJ_G0004382.1 mouse_genomes_project 7 88712454 88720794 + Gm15880 antisense antisense MGP_CBAJ_T0084146.1 MGP_CBAJ_G0032073.1 mouse_genomes_project 7 88217999 88262659 + MGP_CBAJ_P0084146 Sema4b protein_coding protein_coding MGP_CBAJ_T0084147.1 MGP_CBAJ_G0032073.1 mouse_genomes_project 7 88218036 88255428 + Sema4b protein_coding retained_intron MGP_CBAJ_T0084148.1 MGP_CBAJ_G0032073.1 mouse_genomes_project 7 88229620 88262543 + MGP_CBAJ_P0084148 Sema4b protein_coding protein_coding MGP_CBAJ_T0084149.1 MGP_CBAJ_G0032073.1 mouse_genomes_project 7 88229715 88247645 + Sema4b protein_coding retained_intron MGP_CBAJ_T0008811.1 MGP_CBAJ_G0007106.1 mouse_genomes_project 7 80338023 80338403 - Gm28746 lincRNA lincRNA MGP_CBAJ_T0102145.1 MGP_CBAJ_G0040174.1 mouse_genomes_project 7 51968219 51970687 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015497.1 MGP_CBAJ_G0013609.1 mouse_genomes_project 7 16131678 16132143 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0085074.1 MGP_CBAJ_G0032369.1 mouse_genomes_project 7 115339775 115355034 - MGP_CBAJ_P0085074 Olfm5 protein_coding protein_coding MGP_CBAJ_T0085075.1 MGP_CBAJ_G0032369.1 mouse_genomes_project 7 115340879 115355015 - MGP_CBAJ_P0085075 Olfm5 protein_coding protein_coding MGP_CBAJ_T0087476.1 MGP_CBAJ_G0032968.1 mouse_genomes_project 7 161451014 161463969 + MGP_CBAJ_P0087476 Mrgprd protein_coding protein_coding MGP_CBAJ_T0099475.1 MGP_CBAJ_G0037730.1 mouse_genomes_project 7 15114310 15114433 - Gm26473 snRNA snRNA MGP_CBAJ_T0082126.1 MGP_CBAJ_G0031592.1 mouse_genomes_project 7 28467580 28483462 + MGP_CBAJ_P0082126 protein_coding protein_coding MGP_CBAJ_T0081476.1 MGP_CBAJ_G0031419.1 mouse_genomes_project 7 18506213 18537154 + MGP_CBAJ_P0081476 Sympk protein_coding protein_coding MGP_CBAJ_T0081477.1 MGP_CBAJ_G0031419.1 mouse_genomes_project 7 18506256 18518545 + MGP_CBAJ_P0081477 Sympk protein_coding protein_coding MGP_CBAJ_T0081478.1 MGP_CBAJ_G0031419.1 mouse_genomes_project 7 18506259 18517659 + Sympk protein_coding retained_intron MGP_CBAJ_T0081479.1 MGP_CBAJ_G0031419.1 mouse_genomes_project 7 18506262 18534308 + MGP_CBAJ_P0081479 Sympk protein_coding nonsense_mediated_decay MGP_CBAJ_T0081480.1 MGP_CBAJ_G0031419.1 mouse_genomes_project 7 18528208 18532606 + Sympk protein_coding processed_transcript MGP_CBAJ_T0081481.1 MGP_CBAJ_G0031419.1 mouse_genomes_project 7 18534891 18537149 + Sympk protein_coding processed_transcript MGP_CBAJ_T0081482.1 MGP_CBAJ_G0031419.1 mouse_genomes_project 7 18534958 18537155 + MGP_CBAJ_P0081482 Sympk protein_coding protein_coding MGP_CBAJ_T0081483.1 MGP_CBAJ_G0031419.1 mouse_genomes_project 7 18534988 18536439 + Sympk protein_coding retained_intron MGP_CBAJ_T0015598.1 MGP_CBAJ_G0013710.1 mouse_genomes_project 7 67398511 67398970 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010786.1 MGP_CBAJ_G0008924.1 mouse_genomes_project 7 111449882 111449986 - Mir3102 miRNA miRNA MGP_CBAJ_T0085502.1 MGP_CBAJ_G0032545.1 mouse_genomes_project 7 125715339 125780376 - MGP_CBAJ_P0085502 Btbd10 protein_coding protein_coding MGP_CBAJ_T0085503.1 MGP_CBAJ_G0032545.1 mouse_genomes_project 7 125715350 125753131 - MGP_CBAJ_P0085503 Btbd10 protein_coding protein_coding MGP_CBAJ_T0085504.1 MGP_CBAJ_G0032545.1 mouse_genomes_project 7 125715359 125760681 - MGP_CBAJ_P0085504 Btbd10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085505.1 MGP_CBAJ_G0032545.1 mouse_genomes_project 7 125728701 125732704 - Btbd10 protein_coding retained_intron MGP_CBAJ_T0085506.1 MGP_CBAJ_G0032545.1 mouse_genomes_project 7 125779651 125780373 - Btbd10 protein_coding processed_transcript MGP_CBAJ_T0102131.1 MGP_CBAJ_G0040160.1 mouse_genomes_project 7 45674235 45674370 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0102189.1 MGP_CBAJ_G0040218.1 mouse_genomes_project 7 94951612 94952552 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0080788.1 MGP_CBAJ_G0031187.1 mouse_genomes_project 7 650620 663119 + MGP_CBAJ_P0080788 Prpf31 protein_coding protein_coding MGP_CBAJ_T0080789.1 MGP_CBAJ_G0031187.1 mouse_genomes_project 7 650620 663120 + MGP_CBAJ_P0080789 Prpf31 protein_coding protein_coding MGP_CBAJ_T0080790.1 MGP_CBAJ_G0031187.1 mouse_genomes_project 7 650627 652057 + Prpf31 protein_coding retained_intron MGP_CBAJ_T0080791.1 MGP_CBAJ_G0031187.1 mouse_genomes_project 7 650694 657692 + MGP_CBAJ_P0080791 Prpf31 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080792.1 MGP_CBAJ_G0031187.1 mouse_genomes_project 7 651192 661863 + MGP_CBAJ_P0080792 Prpf31 protein_coding protein_coding MGP_CBAJ_T0080793.1 MGP_CBAJ_G0031187.1 mouse_genomes_project 7 656730 657692 + Prpf31 protein_coding retained_intron MGP_CBAJ_T0086434.1 MGP_CBAJ_G0032728.1 mouse_genomes_project 7 142005874 142040608 + Stx4a protein_coding processed_transcript MGP_CBAJ_T0086435.1 MGP_CBAJ_G0032728.1 mouse_genomes_project 7 142031736 142040608 + MGP_CBAJ_P0086435 Stx4a protein_coding protein_coding MGP_CBAJ_T0086436.1 MGP_CBAJ_G0032728.1 mouse_genomes_project 7 142031940 142040589 + MGP_CBAJ_P0086436 Stx4a protein_coding protein_coding MGP_CBAJ_T0086437.1 MGP_CBAJ_G0032728.1 mouse_genomes_project 7 142031942 142033917 + Stx4a protein_coding retained_intron MGP_CBAJ_T0086438.1 MGP_CBAJ_G0032728.1 mouse_genomes_project 7 142031950 142036789 + MGP_CBAJ_P0086438 Stx4a protein_coding nonsense_mediated_decay MGP_CBAJ_T0086439.1 MGP_CBAJ_G0032728.1 mouse_genomes_project 7 142032657 142036757 + Stx4a protein_coding retained_intron MGP_CBAJ_T0086440.1 MGP_CBAJ_G0032728.1 mouse_genomes_project 7 142033570 142040266 + Stx4a protein_coding retained_intron MGP_CBAJ_T0086441.1 MGP_CBAJ_G0032728.1 mouse_genomes_project 7 142035954 142040087 + Stx4a protein_coding retained_intron MGP_CBAJ_T0086442.1 MGP_CBAJ_G0032728.1 mouse_genomes_project 7 142039979 142040608 + Stx4a protein_coding retained_intron MGP_CBAJ_T0010765.1 MGP_CBAJ_G0008903.1 mouse_genomes_project 7 67735461 67735553 - Mir344c miRNA miRNA MGP_CBAJ_T0082090.1 MGP_CBAJ_G0031587.1 mouse_genomes_project 7 28253051 28283588 - MGP_CBAJ_P0082090 Pld3 protein_coding protein_coding MGP_CBAJ_T0082091.1 MGP_CBAJ_G0031587.1 mouse_genomes_project 7 28253051 28283582 - MGP_CBAJ_P0082091 Pld3 protein_coding protein_coding MGP_CBAJ_T0082092.1 MGP_CBAJ_G0031587.1 mouse_genomes_project 7 28253246 28253798 - Pld3 protein_coding retained_intron MGP_CBAJ_T0082093.1 MGP_CBAJ_G0031587.1 mouse_genomes_project 7 28254505 28265600 - Pld3 protein_coding retained_intron MGP_CBAJ_T0082094.1 MGP_CBAJ_G0031587.1 mouse_genomes_project 7 28267310 28283386 - MGP_CBAJ_P0082094 Pld3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082095.1 MGP_CBAJ_G0031587.1 mouse_genomes_project 7 28268876 28283554 - MGP_CBAJ_P0082095 Pld3 protein_coding protein_coding MGP_CBAJ_T0082096.1 MGP_CBAJ_G0031587.1 mouse_genomes_project 7 28269411 28270416 - MGP_CBAJ_P0082096 Pld3 protein_coding protein_coding MGP_CBAJ_T0082097.1 MGP_CBAJ_G0031587.1 mouse_genomes_project 7 28270486 28283521 - Pld3 protein_coding processed_transcript MGP_CBAJ_T0083906.1 MGP_CBAJ_G0032028.1 mouse_genomes_project 7 73659633 73809259 - MGP_CBAJ_P0083906 Mef2a protein_coding protein_coding MGP_CBAJ_T0083907.1 MGP_CBAJ_G0032028.1 mouse_genomes_project 7 73660388 73809259 - MGP_CBAJ_P0083907 Mef2a protein_coding protein_coding MGP_CBAJ_T0083908.1 MGP_CBAJ_G0032028.1 mouse_genomes_project 7 73660554 73743581 - MGP_CBAJ_P0083908 Mef2a protein_coding nonsense_mediated_decay MGP_CBAJ_T0083909.1 MGP_CBAJ_G0032028.1 mouse_genomes_project 7 73662509 73809259 - MGP_CBAJ_P0083909 Mef2a protein_coding protein_coding MGP_CBAJ_T0083910.1 MGP_CBAJ_G0032028.1 mouse_genomes_project 7 73662617 73809259 - MGP_CBAJ_P0083910 Mef2a protein_coding nonsense_mediated_decay MGP_CBAJ_T0083911.1 MGP_CBAJ_G0032028.1 mouse_genomes_project 7 73662677 73809259 - MGP_CBAJ_P0083911 Mef2a protein_coding protein_coding MGP_CBAJ_T0083912.1 MGP_CBAJ_G0032028.1 mouse_genomes_project 7 73680353 73809259 - MGP_CBAJ_P0083912 Mef2a protein_coding protein_coding MGP_CBAJ_T0083913.1 MGP_CBAJ_G0032028.1 mouse_genomes_project 7 73780751 73809228 - Mef2a protein_coding processed_transcript MGP_CBAJ_T0084409.1 MGP_CBAJ_G0032131.1 mouse_genomes_project 7 93504266 93505119 + MGP_CBAJ_P0084409 Olfr290 protein_coding protein_coding MGP_CBAJ_T0081116.1 MGP_CBAJ_G0031279.1 mouse_genomes_project 7 4786125 4815544 - MGP_CBAJ_P0081116 Clcn4 protein_coding protein_coding MGP_CBAJ_T0081484.1 MGP_CBAJ_G0031420.1 mouse_genomes_project 7 18537226 18561207 + MGP_CBAJ_P0081484 Rsph6a protein_coding protein_coding MGP_CBAJ_T0081485.1 MGP_CBAJ_G0031420.1 mouse_genomes_project 7 18537235 18561207 + MGP_CBAJ_P0081485 Rsph6a protein_coding protein_coding MGP_CBAJ_T0081486.1 MGP_CBAJ_G0031420.1 mouse_genomes_project 7 18539979 18552492 + Rsph6a protein_coding processed_transcript MGP_CBAJ_T0008713.1 MGP_CBAJ_G0007029.1 mouse_genomes_project 7 25277078 25281268 + D930028M14Rik lincRNA lincRNA MGP_CBAJ_T0008714.1 MGP_CBAJ_G0007029.1 mouse_genomes_project 7 25279709 25280860 + D930028M14Rik lincRNA lincRNA MGP_CBAJ_T0008709.1 MGP_CBAJ_G0007025.1 mouse_genomes_project 7 24402712 24405685 + Gm44512 lincRNA lincRNA MGP_CBAJ_T0086400.1 MGP_CBAJ_G0032721.1 mouse_genomes_project 7 141882327 141906378 - MGP_CBAJ_P0086400 Ctf2 protein_coding protein_coding MGP_CBAJ_T0086401.1 MGP_CBAJ_G0032721.1 mouse_genomes_project 7 141882327 141890513 - MGP_CBAJ_P0086401 Ctf2 protein_coding protein_coding MGP_CBAJ_T0084418.1 MGP_CBAJ_G0032139.1 mouse_genomes_project 7 95141947 95142959 - MGP_CBAJ_P0084418 Olfr307 protein_coding protein_coding MGP_CBAJ_T0085137.1 MGP_CBAJ_G0032404.1 mouse_genomes_project 7 116300529 116301483 + MGP_CBAJ_P0085137 Olfr676 protein_coding protein_coding MGP_CBAJ_T0005080.1 MGP_CBAJ_G0004322.1 mouse_genomes_project 7 19436254 19438328 + Gm16174 antisense antisense MGP_CBAJ_T0008962.1 MGP_CBAJ_G0007198.1 mouse_genomes_project 7 160988133 160991035 - Gm26793 lincRNA lincRNA MGP_CBAJ_T0081874.1 MGP_CBAJ_G0031530.1 mouse_genomes_project 7 25461982 25464394 - MGP_CBAJ_P0081874 Pafah1b3 protein_coding protein_coding MGP_CBAJ_T0081875.1 MGP_CBAJ_G0031530.1 mouse_genomes_project 7 25461990 25463644 - Pafah1b3 protein_coding retained_intron MGP_CBAJ_T0081876.1 MGP_CBAJ_G0031530.1 mouse_genomes_project 7 25462300 25464824 - MGP_CBAJ_P0081876 Pafah1b3 protein_coding protein_coding MGP_CBAJ_T0081877.1 MGP_CBAJ_G0031530.1 mouse_genomes_project 7 25462907 25464879 - MGP_CBAJ_P0081877 Pafah1b3 protein_coding protein_coding MGP_CBAJ_T0081878.1 MGP_CBAJ_G0031530.1 mouse_genomes_project 7 25463561 25464863 - Pafah1b3 protein_coding retained_intron MGP_CBAJ_T0081879.1 MGP_CBAJ_G0031530.1 mouse_genomes_project 7 25463815 25464876 - Pafah1b3 protein_coding processed_transcript MGP_CBAJ_T0082199.1 MGP_CBAJ_G0031616.1 mouse_genomes_project 7 29361859 29374769 + MGP_CBAJ_P0082199 Gmfg protein_coding protein_coding MGP_CBAJ_T0082200.1 MGP_CBAJ_G0031616.1 mouse_genomes_project 7 29361899 29374726 + MGP_CBAJ_P0082200 Gmfg protein_coding protein_coding MGP_CBAJ_T0082201.1 MGP_CBAJ_G0031616.1 mouse_genomes_project 7 29365364 29374762 + MGP_CBAJ_P0082201 Gmfg protein_coding protein_coding MGP_CBAJ_T0082202.1 MGP_CBAJ_G0031616.1 mouse_genomes_project 7 29365501 29373457 + MGP_CBAJ_P0082202 Gmfg protein_coding protein_coding MGP_CBAJ_T0082203.1 MGP_CBAJ_G0031616.1 mouse_genomes_project 7 29370571 29376456 + Gmfg protein_coding processed_transcript MGP_CBAJ_T0010731.1 MGP_CBAJ_G0008869.1 mouse_genomes_project 7 30222057 30222116 - Mir1963 miRNA miRNA MGP_CBAJ_T0087463.1 MGP_CBAJ_G0032962.1 mouse_genomes_project 7 160951757 160955615 + MGP_CBAJ_P0087463 Fgf4 protein_coding protein_coding MGP_CBAJ_T0005212.1 MGP_CBAJ_G0004416.1 mouse_genomes_project 7 141634661 141637093 - 1700008J07Rik antisense antisense MGP_CBAJ_T0081385.1 MGP_CBAJ_G0031379.1 mouse_genomes_project 7 15824891 15871457 + MGP_CBAJ_P0081385 Prkd2 protein_coding protein_coding MGP_CBAJ_T0081386.1 MGP_CBAJ_G0031379.1 mouse_genomes_project 7 15825054 15871544 + MGP_CBAJ_P0081386 Prkd2 protein_coding protein_coding MGP_CBAJ_T0081387.1 MGP_CBAJ_G0031379.1 mouse_genomes_project 7 15826150 15832925 + Prkd2 protein_coding processed_transcript MGP_CBAJ_T0081388.1 MGP_CBAJ_G0031379.1 mouse_genomes_project 7 15827259 15830820 + Prkd2 protein_coding processed_transcript MGP_CBAJ_T0081389.1 MGP_CBAJ_G0031379.1 mouse_genomes_project 7 15827825 15834662 + Prkd2 protein_coding retained_intron MGP_CBAJ_T0081390.1 MGP_CBAJ_G0031379.1 mouse_genomes_project 7 15832868 15840428 + Prkd2 protein_coding retained_intron MGP_CBAJ_T0081391.1 MGP_CBAJ_G0031379.1 mouse_genomes_project 7 15861588 15870975 + Prkd2 protein_coding retained_intron MGP_CBAJ_T0081392.1 MGP_CBAJ_G0031379.1 mouse_genomes_project 7 15870334 15871221 + Prkd2 protein_coding retained_intron MGP_CBAJ_T0008730.1 MGP_CBAJ_G0007043.1 mouse_genomes_project 7 36751062 36751779 - Gm44837 lincRNA lincRNA MGP_CBAJ_T0081150.1 MGP_CBAJ_G0031303.1 mouse_genomes_project 7 10612339 10643757 + MGP_CBAJ_P0081150 2900092C05Rik protein_coding protein_coding MGP_CBAJ_T0084802.1 MGP_CBAJ_G0032246.1 mouse_genomes_project 7 111508886 111541315 - MGP_CBAJ_P0084802 P2ry6 protein_coding protein_coding MGP_CBAJ_T0081165.1 MGP_CBAJ_G0031311.1 mouse_genomes_project 7 11010849 11027239 + Zfp128 protein_coding retained_intron MGP_CBAJ_T0081166.1 MGP_CBAJ_G0031311.1 mouse_genomes_project 7 11010849 11028796 + MGP_CBAJ_P0081166 Zfp128 protein_coding protein_coding MGP_CBAJ_T0087167.1 MGP_CBAJ_G0032901.1 mouse_genomes_project 7 157159082 157164622 + MGP_CBAJ_P0087167 Pnpla2 protein_coding protein_coding MGP_CBAJ_T0087168.1 MGP_CBAJ_G0032901.1 mouse_genomes_project 7 157159090 157163971 + MGP_CBAJ_P0087168 Pnpla2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087169.1 MGP_CBAJ_G0032901.1 mouse_genomes_project 7 157159091 157163973 + MGP_CBAJ_P0087169 Pnpla2 protein_coding protein_coding MGP_CBAJ_T0087170.1 MGP_CBAJ_G0032901.1 mouse_genomes_project 7 157159103 157162817 + MGP_CBAJ_P0087170 Pnpla2 protein_coding protein_coding MGP_CBAJ_T0087171.1 MGP_CBAJ_G0032901.1 mouse_genomes_project 7 157159113 157163982 + MGP_CBAJ_P0087171 Pnpla2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087172.1 MGP_CBAJ_G0032901.1 mouse_genomes_project 7 157159491 157162036 + MGP_CBAJ_P0087172 Pnpla2 protein_coding protein_coding MGP_CBAJ_T0087173.1 MGP_CBAJ_G0032901.1 mouse_genomes_project 7 157160902 157162565 + MGP_CBAJ_P0087173 Pnpla2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085108.1 MGP_CBAJ_G0032380.1 mouse_genomes_project 7 115540099 115640174 - MGP_CBAJ_P0085108 Trim30a protein_coding protein_coding MGP_CBAJ_T0085109.1 MGP_CBAJ_G0032380.1 mouse_genomes_project 7 115542408 115543685 - Trim30a protein_coding retained_intron MGP_CBAJ_T0085110.1 MGP_CBAJ_G0032380.1 mouse_genomes_project 7 115542433 115543379 - Trim30a protein_coding processed_transcript MGP_CBAJ_T0085111.1 MGP_CBAJ_G0032380.1 mouse_genomes_project 7 115542748 115543331 - Trim30a protein_coding retained_intron MGP_CBAJ_T0081452.1 MGP_CBAJ_G0031409.1 mouse_genomes_project 7 18228057 18235703 - MGP_CBAJ_P0081452 Psg17 protein_coding protein_coding MGP_CBAJ_T0083370.1 MGP_CBAJ_G0031898.1 mouse_genomes_project 7 49622573 49640045 - MGP_CBAJ_P0083370 Nucb1 protein_coding protein_coding MGP_CBAJ_T0083371.1 MGP_CBAJ_G0031898.1 mouse_genomes_project 7 49623871 49632953 - MGP_CBAJ_P0083371 Nucb1 protein_coding protein_coding MGP_CBAJ_T0083372.1 MGP_CBAJ_G0031898.1 mouse_genomes_project 7 49624752 49625189 - Nucb1 protein_coding processed_transcript MGP_CBAJ_T0083373.1 MGP_CBAJ_G0031898.1 mouse_genomes_project 7 49625126 49632947 - Nucb1 protein_coding processed_transcript MGP_CBAJ_T0083374.1 MGP_CBAJ_G0031898.1 mouse_genomes_project 7 49627866 49628538 - Nucb1 protein_coding retained_intron MGP_CBAJ_T0083375.1 MGP_CBAJ_G0031898.1 mouse_genomes_project 7 49628426 49639954 - MGP_CBAJ_P0083375 Nucb1 protein_coding protein_coding MGP_CBAJ_T0083376.1 MGP_CBAJ_G0031898.1 mouse_genomes_project 7 49631292 49639970 - MGP_CBAJ_P0083376 Nucb1 protein_coding protein_coding MGP_CBAJ_T0083377.1 MGP_CBAJ_G0031898.1 mouse_genomes_project 7 49632761 49640028 - Nucb1 protein_coding processed_transcript MGP_CBAJ_T0083378.1 MGP_CBAJ_G0031898.1 mouse_genomes_project 7 49636807 49640024 - Nucb1 protein_coding retained_intron MGP_CBAJ_T0081135.1 MGP_CBAJ_G0031294.1 mouse_genomes_project 7 9896575 9897550 - MGP_CBAJ_P0081135 Vmn1r76 protein_coding protein_coding MGP_CBAJ_T0086892.1 MGP_CBAJ_G0032826.1 mouse_genomes_project 7 155458539 155467929 - 6430531B16Rik protein_coding retained_intron MGP_CBAJ_T0086893.1 MGP_CBAJ_G0032826.1 mouse_genomes_project 7 155458539 155467961 - MGP_CBAJ_P0086893 6430531B16Rik protein_coding protein_coding MGP_CBAJ_T0086894.1 MGP_CBAJ_G0032826.1 mouse_genomes_project 7 155464702 155467929 - MGP_CBAJ_P0086894 6430531B16Rik protein_coding protein_coding MGP_CBAJ_T0002229.1 MGP_CBAJ_G0002143.1 mouse_genomes_project 7 84244464 84246032 - TEC TEC MGP_CBAJ_T0002178.1 MGP_CBAJ_G0002093.1 mouse_genomes_project 7 40208613 40211874 - TEC TEC MGP_CBAJ_T0083209.1 MGP_CBAJ_G0031851.1 mouse_genomes_project 7 48863626 48871633 - Tbc1d17 protein_coding retained_intron MGP_CBAJ_T0083210.1 MGP_CBAJ_G0031851.1 mouse_genomes_project 7 48863746 48871797 - MGP_CBAJ_P0083210 Tbc1d17 protein_coding protein_coding MGP_CBAJ_T0083211.1 MGP_CBAJ_G0031851.1 mouse_genomes_project 7 48863753 48871801 - MGP_CBAJ_P0083211 Tbc1d17 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083212.1 MGP_CBAJ_G0031851.1 mouse_genomes_project 7 48863754 48871612 - Tbc1d17 protein_coding retained_intron MGP_CBAJ_T0083213.1 MGP_CBAJ_G0031851.1 mouse_genomes_project 7 48866101 48867046 - Tbc1d17 protein_coding retained_intron MGP_CBAJ_T0083214.1 MGP_CBAJ_G0031851.1 mouse_genomes_project 7 48867298 48868722 - Tbc1d17 protein_coding retained_intron MGP_CBAJ_T0083215.1 MGP_CBAJ_G0031851.1 mouse_genomes_project 7 48870747 48871617 - Tbc1d17 protein_coding retained_intron MGP_CBAJ_T0083216.1 MGP_CBAJ_G0031851.1 mouse_genomes_project 7 48870996 48871316 - Tbc1d17 protein_coding retained_intron MGP_CBAJ_T0099496.1 MGP_CBAJ_G0037751.1 mouse_genomes_project 7 80876886 80876991 - Gm26176 snRNA snRNA MGP_CBAJ_T0085640.1 MGP_CBAJ_G0032571.1 mouse_genomes_project 7 131520232 131580282 - MGP_CBAJ_P0085640 Tmc7 protein_coding protein_coding MGP_CBAJ_T0085641.1 MGP_CBAJ_G0032571.1 mouse_genomes_project 7 131530703 131580230 - Tmc7 protein_coding retained_intron MGP_CBAJ_T0085642.1 MGP_CBAJ_G0032571.1 mouse_genomes_project 7 131551022 131555836 - Tmc7 protein_coding retained_intron MGP_CBAJ_T0085643.1 MGP_CBAJ_G0032571.1 mouse_genomes_project 7 131564199 131580255 - Tmc7 protein_coding processed_transcript MGP_CBAJ_T0081780.1 MGP_CBAJ_G0031510.1 mouse_genomes_project 7 24722875 24733882 + MGP_CBAJ_P0081780 BC049730 protein_coding protein_coding MGP_CBAJ_T0002201.1 MGP_CBAJ_G0002116.1 mouse_genomes_project 7 63367719 63369958 + TEC TEC MGP_CBAJ_T0015585.1 MGP_CBAJ_G0013697.1 mouse_genomes_project 7 52790697 52791334 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0085797.1 MGP_CBAJ_G0032613.1 mouse_genomes_project 7 134730475 134736683 + MGP_CBAJ_P0085797 Hs3st2 protein_coding protein_coding MGP_CBAJ_T0085798.1 MGP_CBAJ_G0032613.1 mouse_genomes_project 7 134730906 134851671 + MGP_CBAJ_P0085798 Hs3st2 protein_coding protein_coding MGP_CBAJ_T0086943.1 MGP_CBAJ_G0032842.1 mouse_genomes_project 7 155758599 155821562 + MGP_CBAJ_P0086943 5830411N06Rik protein_coding protein_coding MGP_CBAJ_T0086944.1 MGP_CBAJ_G0032842.1 mouse_genomes_project 7 155758676 155823717 + MGP_CBAJ_P0086944 5830411N06Rik protein_coding protein_coding MGP_CBAJ_T0086945.1 MGP_CBAJ_G0032842.1 mouse_genomes_project 7 155758679 155823717 + MGP_CBAJ_P0086945 5830411N06Rik protein_coding protein_coding MGP_CBAJ_T0098088.1 MGP_CBAJ_G0036361.1 mouse_genomes_project 7 72722553 72722643 - Gm23957 rRNA rRNA MGP_CBAJ_T0015613.1 MGP_CBAJ_G0013725.1 mouse_genomes_project 7 82182273 82182403 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010782.1 MGP_CBAJ_G0008920.1 mouse_genomes_project 7 95100061 95100157 - Gm23192 miRNA miRNA MGP_CBAJ_T0015697.1 MGP_CBAJ_G0013809.1 mouse_genomes_project 7 142419588 142420488 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0102174.1 MGP_CBAJ_G0040203.1 mouse_genomes_project 7 93999298 94000750 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010770.1 MGP_CBAJ_G0008908.1 mouse_genomes_project 7 68020034 68020122 - Gm24923 miRNA miRNA MGP_CBAJ_T0015675.1 MGP_CBAJ_G0013787.1 mouse_genomes_project 7 133847215 133848066 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0083955.1 MGP_CBAJ_G0032038.1 mouse_genomes_project 7 80558712 80614368 + MGP_CBAJ_P0083955 Rgma protein_coding protein_coding MGP_CBAJ_T0083956.1 MGP_CBAJ_G0032038.1 mouse_genomes_project 7 80573996 80603980 + MGP_CBAJ_P0083956 Rgma protein_coding protein_coding MGP_CBAJ_T0083957.1 MGP_CBAJ_G0032038.1 mouse_genomes_project 7 80574112 80576084 + Rgma protein_coding retained_intron MGP_CBAJ_T0010764.1 MGP_CBAJ_G0008902.1 mouse_genomes_project 7 67682607 67682670 - Mir344b miRNA miRNA MGP_CBAJ_T0081427.1 MGP_CBAJ_G0031391.1 mouse_genomes_project 7 16262320 16279349 + MGP_CBAJ_P0081427 Psg29 protein_coding protein_coding MGP_CBAJ_T0010773.1 MGP_CBAJ_G0008911.1 mouse_genomes_project 7 70415555 70415672 - Mir6416 miRNA miRNA MGP_CBAJ_T0082000.1 MGP_CBAJ_G0031566.1 mouse_genomes_project 7 27739303 27761496 + MGP_CBAJ_P0082000 Cyp2f2 protein_coding protein_coding MGP_CBAJ_T0082001.1 MGP_CBAJ_G0031566.1 mouse_genomes_project 7 27739355 27750298 + Cyp2f2 protein_coding processed_transcript MGP_CBAJ_T0082002.1 MGP_CBAJ_G0031566.1 mouse_genomes_project 7 27742788 27759070 + MGP_CBAJ_P0082002 Cyp2f2 protein_coding protein_coding MGP_CBAJ_T0005141.1 MGP_CBAJ_G0004367.1 mouse_genomes_project 7 70502498 70510854 - Gm20457 antisense antisense MGP_CBAJ_T0085649.1 MGP_CBAJ_G0032573.1 mouse_genomes_project 7 131698728 131716802 - MGP_CBAJ_P0085649 Gde1 protein_coding protein_coding MGP_CBAJ_T0085650.1 MGP_CBAJ_G0032573.1 mouse_genomes_project 7 131701781 131716404 - MGP_CBAJ_P0085650 Gde1 protein_coding protein_coding MGP_CBAJ_T0098093.1 MGP_CBAJ_G0036366.1 mouse_genomes_project 7 125491272 125491383 + Gm23662 rRNA rRNA MGP_CBAJ_T0008801.1 MGP_CBAJ_G0007096.1 mouse_genomes_project 7 78230305 78270125 + Gm29295 lincRNA lincRNA MGP_CBAJ_T0083217.1 MGP_CBAJ_G0031852.1 mouse_genomes_project 7 48871712 48878128 + MGP_CBAJ_P0083217 Akt1s1 protein_coding protein_coding MGP_CBAJ_T0083218.1 MGP_CBAJ_G0031852.1 mouse_genomes_project 7 48871945 48878141 + MGP_CBAJ_P0083218 Akt1s1 protein_coding protein_coding MGP_CBAJ_T0083219.1 MGP_CBAJ_G0031852.1 mouse_genomes_project 7 48872065 48878137 + Akt1s1 protein_coding retained_intron MGP_CBAJ_T0083220.1 MGP_CBAJ_G0031852.1 mouse_genomes_project 7 48872302 48875666 + MGP_CBAJ_P0083220 Akt1s1 protein_coding protein_coding MGP_CBAJ_T0083221.1 MGP_CBAJ_G0031852.1 mouse_genomes_project 7 48872350 48877456 + MGP_CBAJ_P0083221 Akt1s1 protein_coding protein_coding MGP_CBAJ_T0083222.1 MGP_CBAJ_G0031852.1 mouse_genomes_project 7 48872728 48876756 + MGP_CBAJ_P0083222 Akt1s1 protein_coding protein_coding MGP_CBAJ_T0083223.1 MGP_CBAJ_G0031852.1 mouse_genomes_project 7 48872737 48878138 + MGP_CBAJ_P0083223 Akt1s1 protein_coding protein_coding MGP_CBAJ_T0083224.1 MGP_CBAJ_G0031852.1 mouse_genomes_project 7 48873117 48875583 + MGP_CBAJ_P0083224 Akt1s1 protein_coding protein_coding MGP_CBAJ_T0083225.1 MGP_CBAJ_G0031852.1 mouse_genomes_project 7 48874213 48875358 + MGP_CBAJ_P0083225 Akt1s1 protein_coding protein_coding MGP_CBAJ_T0083226.1 MGP_CBAJ_G0031852.1 mouse_genomes_project 7 48875290 48877406 + MGP_CBAJ_P0083226 Akt1s1 protein_coding protein_coding MGP_CBAJ_T0083227.1 MGP_CBAJ_G0031852.1 mouse_genomes_project 7 48875639 48877364 + Akt1s1 protein_coding retained_intron MGP_CBAJ_T0084207.1 MGP_CBAJ_G0032082.1 mouse_genomes_project 7 88386709 88388937 + MGP_CBAJ_P0084207 Hddc3 protein_coding protein_coding MGP_CBAJ_T0084208.1 MGP_CBAJ_G0032082.1 mouse_genomes_project 7 88386721 88387585 + MGP_CBAJ_P0084208 Hddc3 protein_coding protein_coding MGP_CBAJ_T0084209.1 MGP_CBAJ_G0032082.1 mouse_genomes_project 7 88387171 88387987 + MGP_CBAJ_P0084209 Hddc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084210.1 MGP_CBAJ_G0032082.1 mouse_genomes_project 7 88387384 88392817 + MGP_CBAJ_P0084210 Hddc3 protein_coding protein_coding MGP_CBAJ_T0087400.1 MGP_CBAJ_G0032950.1 mouse_genomes_project 7 159651159 159656959 - Osbpl5 protein_coding retained_intron MGP_CBAJ_T0087401.1 MGP_CBAJ_G0032950.1 mouse_genomes_project 7 159651159 159702441 - MGP_CBAJ_P0087401 Osbpl5 protein_coding protein_coding MGP_CBAJ_T0087402.1 MGP_CBAJ_G0032950.1 mouse_genomes_project 7 159651159 159704063 - MGP_CBAJ_P0087402 Osbpl5 protein_coding protein_coding MGP_CBAJ_T0087403.1 MGP_CBAJ_G0032950.1 mouse_genomes_project 7 159656661 159657485 - Osbpl5 protein_coding retained_intron MGP_CBAJ_T0087404.1 MGP_CBAJ_G0032950.1 mouse_genomes_project 7 159665164 159667231 - Osbpl5 protein_coding retained_intron MGP_CBAJ_T0087405.1 MGP_CBAJ_G0032950.1 mouse_genomes_project 7 159671162 159721326 - MGP_CBAJ_P0087405 Osbpl5 protein_coding protein_coding MGP_CBAJ_T0087406.1 MGP_CBAJ_G0032950.1 mouse_genomes_project 7 159675607 159702399 - Osbpl5 protein_coding processed_transcript MGP_CBAJ_T0080841.1 MGP_CBAJ_G0031197.1 mouse_genomes_project 7 1150048 1203277 - MGP_CBAJ_P0080841 Lair1 protein_coding protein_coding MGP_CBAJ_T0080842.1 MGP_CBAJ_G0031197.1 mouse_genomes_project 7 1156021 1203302 - MGP_CBAJ_P0080842 Lair1 protein_coding protein_coding MGP_CBAJ_T0080843.1 MGP_CBAJ_G0031197.1 mouse_genomes_project 7 1157007 1203272 - MGP_CBAJ_P0080843 Lair1 protein_coding protein_coding MGP_CBAJ_T0080844.1 MGP_CBAJ_G0031197.1 mouse_genomes_project 7 1157928 1203259 - MGP_CBAJ_P0080844 Lair1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080845.1 MGP_CBAJ_G0031197.1 mouse_genomes_project 7 1157955 1203237 - MGP_CBAJ_P0080845 Lair1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080846.1 MGP_CBAJ_G0031197.1 mouse_genomes_project 7 1158115 1169398 - Lair1 protein_coding processed_transcript MGP_CBAJ_T0080847.1 MGP_CBAJ_G0031197.1 mouse_genomes_project 7 1158521 1203214 - MGP_CBAJ_P0080847 Lair1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080848.1 MGP_CBAJ_G0031197.1 mouse_genomes_project 7 1158611 1203239 - MGP_CBAJ_P0080848 Lair1 protein_coding protein_coding MGP_CBAJ_T0080849.1 MGP_CBAJ_G0031197.1 mouse_genomes_project 7 1158611 1203239 - MGP_CBAJ_P0080849 Lair1 protein_coding protein_coding MGP_CBAJ_T0080850.1 MGP_CBAJ_G0031197.1 mouse_genomes_project 7 1169552 1203246 - Lair1 protein_coding processed_transcript MGP_CBAJ_T0087283.1 MGP_CBAJ_G0032928.1 mouse_genomes_project 7 158338579 158354279 - MGP_CBAJ_P0087283 protein_coding protein_coding MGP_CBAJ_T0087284.1 MGP_CBAJ_G0032928.1 mouse_genomes_project 7 158340255 158344477 - protein_coding processed_transcript MGP_CBAJ_T0002170.1 MGP_CBAJ_G0002085.1 mouse_genomes_project 7 39131621 39132543 + TEC TEC MGP_CBAJ_T0085686.1 MGP_CBAJ_G0032582.1 mouse_genomes_project 7 132571174 132604237 - MGP_CBAJ_P0085686 Pdilt protein_coding protein_coding MGP_CBAJ_T0005216.1 MGP_CBAJ_G0004420.1 mouse_genomes_project 7 142225087 142228349 - Gm15533 antisense antisense MGP_CBAJ_T0005217.1 MGP_CBAJ_G0004420.1 mouse_genomes_project 7 142226037 142228379 - Gm15533 antisense antisense MGP_CBAJ_T0015687.1 MGP_CBAJ_G0013799.1 mouse_genomes_project 7 140694751 140695225 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0081658.1 MGP_CBAJ_G0031464.1 mouse_genomes_project 7 19485790 19494921 - MGP_CBAJ_P0081658 Ceacam16 protein_coding protein_coding MGP_CBAJ_T0015464.1 MGP_CBAJ_G0013576.1 mouse_genomes_project 7 1778445 1779197 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0082365.1 MGP_CBAJ_G0031654.1 mouse_genomes_project 7 30736667 30758056 + MGP_CBAJ_P0082365 protein_coding protein_coding MGP_CBAJ_T0082366.1 MGP_CBAJ_G0031654.1 mouse_genomes_project 7 30756714 30758054 + MGP_CBAJ_P0082366 protein_coding protein_coding MGP_CBAJ_T0081022.1 MGP_CBAJ_G0031233.1 mouse_genomes_project 7 2196070 2201938 - MGP_CBAJ_P0081022 Sbk3 protein_coding protein_coding MGP_CBAJ_T0081023.1 MGP_CBAJ_G0031233.1 mouse_genomes_project 7 2198337 2202145 - MGP_CBAJ_P0081023 Sbk3 protein_coding protein_coding MGP_CBAJ_T0008860.1 MGP_CBAJ_G0007134.1 mouse_genomes_project 7 97330786 97337139 - Gm26522 lincRNA lincRNA MGP_CBAJ_T0085143.1 MGP_CBAJ_G0032410.1 mouse_genomes_project 7 116492306 116493394 - MGP_CBAJ_P0085143 Olfr685 protein_coding protein_coding MGP_CBAJ_T0085398.1 MGP_CBAJ_G0032523.1 mouse_genomes_project 7 122044793 122083794 + MGP_CBAJ_P0085398 Ipo7 protein_coding protein_coding MGP_CBAJ_T0015552.1 MGP_CBAJ_G0013664.1 mouse_genomes_project 7 44041045 44041757 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0084944.1 MGP_CBAJ_G0032270.1 mouse_genomes_project 7 112886845 112893435 - MGP_CBAJ_P0084944 Chrna10 protein_coding protein_coding MGP_CBAJ_T0084454.1 MGP_CBAJ_G0032160.1 mouse_genomes_project 7 97495420 97558903 + MGP_CBAJ_P0084454 Rab38 protein_coding protein_coding MGP_CBAJ_T0081666.1 MGP_CBAJ_G0031469.1 mouse_genomes_project 7 19622752 19650948 + MGP_CBAJ_P0081666 Ceacam20 protein_coding protein_coding MGP_CBAJ_T0085685.1 MGP_CBAJ_G0032581.1 mouse_genomes_project 7 132544462 132563009 - MGP_CBAJ_P0085685 Umod protein_coding protein_coding MGP_CBAJ_T0086796.1 MGP_CBAJ_G0032798.1 mouse_genomes_project 7 149187055 149288462 - MGP_CBAJ_P0086796 D7Ertd443e protein_coding protein_coding MGP_CBAJ_T0086797.1 MGP_CBAJ_G0032798.1 mouse_genomes_project 7 149187068 149264136 - MGP_CBAJ_P0086797 D7Ertd443e protein_coding protein_coding MGP_CBAJ_T0086798.1 MGP_CBAJ_G0032798.1 mouse_genomes_project 7 149187406 149280470 - MGP_CBAJ_P0086798 D7Ertd443e protein_coding protein_coding MGP_CBAJ_T0086799.1 MGP_CBAJ_G0032798.1 mouse_genomes_project 7 149187607 149189634 - D7Ertd443e protein_coding retained_intron MGP_CBAJ_T0086800.1 MGP_CBAJ_G0032798.1 mouse_genomes_project 7 149187607 149271066 - MGP_CBAJ_P0086800 D7Ertd443e protein_coding protein_coding MGP_CBAJ_T0086801.1 MGP_CBAJ_G0032798.1 mouse_genomes_project 7 149271702 149303073 - MGP_CBAJ_P0086801 D7Ertd443e protein_coding protein_coding MGP_CBAJ_T0086802.1 MGP_CBAJ_G0032798.1 mouse_genomes_project 7 149271823 149303067 - MGP_CBAJ_P0086802 D7Ertd443e protein_coding protein_coding MGP_CBAJ_T0086803.1 MGP_CBAJ_G0032798.1 mouse_genomes_project 7 149276444 149311903 - D7Ertd443e protein_coding processed_transcript MGP_CBAJ_T0087006.1 MGP_CBAJ_G0032870.1 mouse_genomes_project 7 156551178 156557444 + MGP_CBAJ_P0087006 Athl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087007.1 MGP_CBAJ_G0032870.1 mouse_genomes_project 7 156551353 156557446 + Athl1 protein_coding retained_intron MGP_CBAJ_T0087008.1 MGP_CBAJ_G0032870.1 mouse_genomes_project 7 156551358 156552900 + Athl1 protein_coding processed_transcript MGP_CBAJ_T0087009.1 MGP_CBAJ_G0032870.1 mouse_genomes_project 7 156551368 156557452 + MGP_CBAJ_P0087009 Athl1 protein_coding protein_coding MGP_CBAJ_T0087010.1 MGP_CBAJ_G0032870.1 mouse_genomes_project 7 156552097 156556632 + MGP_CBAJ_P0087010 Athl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087011.1 MGP_CBAJ_G0032870.1 mouse_genomes_project 7 156552323 156557448 + MGP_CBAJ_P0087011 Athl1 protein_coding protein_coding MGP_CBAJ_T0084613.1 MGP_CBAJ_G0032200.1 mouse_genomes_project 7 108222652 108306053 - MGP_CBAJ_P0084613 Myo7a protein_coding protein_coding MGP_CBAJ_T0084614.1 MGP_CBAJ_G0032200.1 mouse_genomes_project 7 108222655 108240878 - MGP_CBAJ_P0084614 Myo7a protein_coding nonsense_mediated_decay MGP_CBAJ_T0084615.1 MGP_CBAJ_G0032200.1 mouse_genomes_project 7 108222993 108291772 - MGP_CBAJ_P0084615 Myo7a protein_coding protein_coding MGP_CBAJ_T0084616.1 MGP_CBAJ_G0032200.1 mouse_genomes_project 7 108222993 108291772 - MGP_CBAJ_P0084616 Myo7a protein_coding protein_coding MGP_CBAJ_T0084617.1 MGP_CBAJ_G0032200.1 mouse_genomes_project 7 108223082 108284635 - MGP_CBAJ_P0084617 Myo7a protein_coding protein_coding MGP_CBAJ_T0084618.1 MGP_CBAJ_G0032200.1 mouse_genomes_project 7 108223217 108306032 - MGP_CBAJ_P0084618 Myo7a protein_coding protein_coding MGP_CBAJ_T0084619.1 MGP_CBAJ_G0032200.1 mouse_genomes_project 7 108234188 108236709 - Myo7a protein_coding retained_intron MGP_CBAJ_T0084620.1 MGP_CBAJ_G0032200.1 mouse_genomes_project 7 108252628 108256061 - Myo7a protein_coding processed_transcript MGP_CBAJ_T0084621.1 MGP_CBAJ_G0032200.1 mouse_genomes_project 7 108271680 108295209 - Myo7a protein_coding processed_transcript MGP_CBAJ_T0084622.1 MGP_CBAJ_G0032200.1 mouse_genomes_project 7 108272255 108280866 - Myo7a protein_coding processed_transcript MGP_CBAJ_T0084623.1 MGP_CBAJ_G0032200.1 mouse_genomes_project 7 108272295 108280865 - Myo7a protein_coding processed_transcript MGP_CBAJ_T0084624.1 MGP_CBAJ_G0032200.1 mouse_genomes_project 7 108272304 108306022 - MGP_CBAJ_P0084624 Myo7a protein_coding protein_coding MGP_CBAJ_T0084625.1 MGP_CBAJ_G0032200.1 mouse_genomes_project 7 108291256 108306021 - Myo7a protein_coding processed_transcript MGP_CBAJ_T0085790.1 MGP_CBAJ_G0032611.1 mouse_genomes_project 7 134359022 134372166 - MGP_CBAJ_P0085790 Igsf6 protein_coding protein_coding MGP_CBAJ_T0083255.1 MGP_CBAJ_G0031862.1 mouse_genomes_project 7 49039469 49045857 - MGP_CBAJ_P0083255 Bcl2l12 protein_coding protein_coding MGP_CBAJ_T0086594.1 MGP_CBAJ_G0032758.1 mouse_genomes_project 7 143665013 143806912 + MGP_CBAJ_P0086594 Plpp4 protein_coding protein_coding MGP_CBAJ_T0086595.1 MGP_CBAJ_G0032758.1 mouse_genomes_project 7 143665020 143738514 + Plpp4 protein_coding retained_intron MGP_CBAJ_T0086596.1 MGP_CBAJ_G0032758.1 mouse_genomes_project 7 143665029 143719822 + Plpp4 protein_coding processed_transcript MGP_CBAJ_T0086597.1 MGP_CBAJ_G0032758.1 mouse_genomes_project 7 143665031 143806807 + MGP_CBAJ_P0086597 Plpp4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086598.1 MGP_CBAJ_G0032758.1 mouse_genomes_project 7 143719801 143806919 + MGP_CBAJ_P0086598 Plpp4 protein_coding protein_coding MGP_CBAJ_T0100754.1 MGP_CBAJ_G0039009.1 mouse_genomes_project 7 109829458 109829606 - Snord15a snoRNA snoRNA MGP_CBAJ_T0086332.1 MGP_CBAJ_G0032711.1 mouse_genomes_project 7 141601202 141614688 + MGP_CBAJ_P0086332 protein_coding protein_coding MGP_CBAJ_T0086333.1 MGP_CBAJ_G0032711.1 mouse_genomes_project 7 141602059 141607647 + protein_coding processed_transcript MGP_CBAJ_T0086334.1 MGP_CBAJ_G0032711.1 mouse_genomes_project 7 141609696 141615934 + MGP_CBAJ_P0086334 protein_coding protein_coding MGP_CBAJ_T0086335.1 MGP_CBAJ_G0032711.1 mouse_genomes_project 7 141609883 141613952 + protein_coding retained_intron MGP_CBAJ_T0086336.1 MGP_CBAJ_G0032711.1 mouse_genomes_project 7 141610116 141614134 + MGP_CBAJ_P0086336 protein_coding protein_coding MGP_CBAJ_T0086337.1 MGP_CBAJ_G0032711.1 mouse_genomes_project 7 141610122 141614544 + MGP_CBAJ_P0086337 protein_coding protein_coding MGP_CBAJ_T0086338.1 MGP_CBAJ_G0032711.1 mouse_genomes_project 7 141611324 141616132 + protein_coding retained_intron MGP_CBAJ_T0086339.1 MGP_CBAJ_G0032711.1 mouse_genomes_project 7 141611538 141612429 + protein_coding retained_intron MGP_CBAJ_T0015480.1 MGP_CBAJ_G0013592.1 mouse_genomes_project 7 11971572 11971786 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008938.1 MGP_CBAJ_G0007184.1 mouse_genomes_project 7 143813597 143818339 - Gm44591 lincRNA lincRNA MGP_CBAJ_T0085164.1 MGP_CBAJ_G0032423.1 mouse_genomes_project 7 116921563 116925592 + MGP_CBAJ_P0085164 Smpd1 protein_coding protein_coding MGP_CBAJ_T0002246.1 MGP_CBAJ_G0002160.1 mouse_genomes_project 7 88680095 88680654 - TEC TEC MGP_CBAJ_T0086971.1 MGP_CBAJ_G0032863.1 mouse_genomes_project 7 156452549 156455745 + MGP_CBAJ_P0086971 Odf3 protein_coding protein_coding MGP_CBAJ_T0086972.1 MGP_CBAJ_G0032863.1 mouse_genomes_project 7 156452567 156455735 + MGP_CBAJ_P0086972 Odf3 protein_coding protein_coding MGP_CBAJ_T0086973.1 MGP_CBAJ_G0032863.1 mouse_genomes_project 7 156452568 156455738 + Odf3 protein_coding retained_intron MGP_CBAJ_T0102064.1 MGP_CBAJ_G0040094.1 mouse_genomes_project 7 9972787 9972986 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081746.1 MGP_CBAJ_G0031499.1 mouse_genomes_project 7 24417079 24436799 + MGP_CBAJ_P0081746 Plaur protein_coding protein_coding MGP_CBAJ_T0081747.1 MGP_CBAJ_G0031499.1 mouse_genomes_project 7 24417080 24423431 + Plaur protein_coding retained_intron MGP_CBAJ_T0081748.1 MGP_CBAJ_G0031499.1 mouse_genomes_project 7 24417090 24433819 + Plaur protein_coding retained_intron MGP_CBAJ_T0081749.1 MGP_CBAJ_G0031499.1 mouse_genomes_project 7 24417095 24436800 + Plaur protein_coding retained_intron MGP_CBAJ_T0081750.1 MGP_CBAJ_G0031499.1 mouse_genomes_project 7 24417095 24432852 + MGP_CBAJ_P0081750 Plaur protein_coding nonsense_mediated_decay MGP_CBAJ_T0081751.1 MGP_CBAJ_G0031499.1 mouse_genomes_project 7 24417095 24436557 + MGP_CBAJ_P0081751 Plaur protein_coding nonsense_mediated_decay MGP_CBAJ_T0015463.1 MGP_CBAJ_G0013575.1 mouse_genomes_project 7 1777668 1778269 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005077.1 MGP_CBAJ_G0004319.1 mouse_genomes_project 7 18782183 18783431 + 1700058P15Rik antisense antisense MGP_CBAJ_T0008761.1 MGP_CBAJ_G0007067.1 mouse_genomes_project 7 44508465 44516216 + lincRNA lincRNA MGP_CBAJ_T0011558.1 MGP_CBAJ_G0009696.1 mouse_genomes_project 7 48141409 48141697 + Gm25386 misc_RNA misc_RNA MGP_CBAJ_T0081990.1 MGP_CBAJ_G0031562.1 mouse_genomes_project 7 27211533 27230692 + MGP_CBAJ_P0081990 Cyp2b19 protein_coding protein_coding MGP_CBAJ_T0081991.1 MGP_CBAJ_G0031562.1 mouse_genomes_project 7 27211554 27223696 + Cyp2b19 protein_coding retained_intron MGP_CBAJ_T0081992.1 MGP_CBAJ_G0031562.1 mouse_genomes_project 7 27224616 27229453 + Cyp2b19 protein_coding retained_intron MGP_CBAJ_T0086585.1 MGP_CBAJ_G0032756.1 mouse_genomes_project 7 143069606 143116657 - MGP_CBAJ_P0086585 Mcmbp protein_coding protein_coding MGP_CBAJ_T0086586.1 MGP_CBAJ_G0032756.1 mouse_genomes_project 7 143070957 143116648 - MGP_CBAJ_P0086586 Mcmbp protein_coding protein_coding MGP_CBAJ_T0086587.1 MGP_CBAJ_G0032756.1 mouse_genomes_project 7 143071377 143072410 - Mcmbp protein_coding processed_transcript MGP_CBAJ_T0086588.1 MGP_CBAJ_G0032756.1 mouse_genomes_project 7 143072513 143076007 - Mcmbp protein_coding retained_intron MGP_CBAJ_T0086589.1 MGP_CBAJ_G0032756.1 mouse_genomes_project 7 143086898 143089146 - Mcmbp protein_coding retained_intron MGP_CBAJ_T0085780.1 MGP_CBAJ_G0032606.1 mouse_genomes_project 7 134201910 134230856 + MGP_CBAJ_P0085780 Polr3e protein_coding protein_coding MGP_CBAJ_T0085781.1 MGP_CBAJ_G0032606.1 mouse_genomes_project 7 134201910 134230856 + MGP_CBAJ_P0085781 Polr3e protein_coding protein_coding MGP_CBAJ_T0011557.1 MGP_CBAJ_G0009695.1 mouse_genomes_project 7 43303947 43304219 + Gm24910 misc_RNA misc_RNA MGP_CBAJ_T0083807.1 MGP_CBAJ_G0032008.1 mouse_genomes_project 7 70560506 70566658 + Mcee protein_coding processed_transcript MGP_CBAJ_T0083808.1 MGP_CBAJ_G0032008.1 mouse_genomes_project 7 70560543 70581045 + MGP_CBAJ_P0083808 Mcee protein_coding protein_coding MGP_CBAJ_T0083809.1 MGP_CBAJ_G0032008.1 mouse_genomes_project 7 70560638 70581041 + MGP_CBAJ_P0083809 Mcee protein_coding protein_coding MGP_CBAJ_T0083810.1 MGP_CBAJ_G0032008.1 mouse_genomes_project 7 70560673 70581041 + MGP_CBAJ_P0083810 Mcee protein_coding protein_coding MGP_CBAJ_T0081678.1 MGP_CBAJ_G0031478.1 mouse_genomes_project 7 23730743 23731658 + MGP_CBAJ_P0081678 Vmn1r178 protein_coding protein_coding MGP_CBAJ_T0086278.1 MGP_CBAJ_G0032696.1 mouse_genomes_project 7 141249394 141257220 + MGP_CBAJ_P0086278 Mylpf protein_coding protein_coding MGP_CBAJ_T0086279.1 MGP_CBAJ_G0032696.1 mouse_genomes_project 7 141255458 141257985 + MGP_CBAJ_P0086279 Mylpf protein_coding protein_coding MGP_CBAJ_T0086280.1 MGP_CBAJ_G0032696.1 mouse_genomes_project 7 141256376 141257185 + MGP_CBAJ_P0086280 Mylpf protein_coding protein_coding MGP_CBAJ_T0086281.1 MGP_CBAJ_G0032696.1 mouse_genomes_project 7 141256811 141257153 + Mylpf protein_coding retained_intron MGP_CBAJ_T0086282.1 MGP_CBAJ_G0032696.1 mouse_genomes_project 7 141257593 141257985 + Mylpf protein_coding retained_intron MGP_CBAJ_T0097836.1 MGP_CBAJ_G0036109.1 mouse_genomes_project 7 119938582 119939526 - pseudogene pseudogene MGP_CBAJ_T0100728.1 MGP_CBAJ_G0038983.1 mouse_genomes_project 7 49187617 49187707 - Snord35a snoRNA snoRNA MGP_CBAJ_T0081105.1 MGP_CBAJ_G0031274.1 mouse_genomes_project 7 4159936 4186466 - MGP_CBAJ_P0081105 Peg3 protein_coding protein_coding MGP_CBAJ_T0081106.1 MGP_CBAJ_G0031274.1 mouse_genomes_project 7 4165439 4186464 - MGP_CBAJ_P0081106 Peg3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081107.1 MGP_CBAJ_G0031274.1 mouse_genomes_project 7 4167740 4179260 - MGP_CBAJ_P0081107 Peg3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081108.1 MGP_CBAJ_G0031274.1 mouse_genomes_project 7 4177977 4186464 - Peg3 protein_coding retained_intron MGP_CBAJ_T0081973.1 MGP_CBAJ_G0031555.1 mouse_genomes_project 7 26658959 27508487 + MGP_CBAJ_P0081973 Cyp2a5 protein_coding protein_coding MGP_CBAJ_T0081975.1 MGP_CBAJ_G0031555.1 mouse_genomes_project 7 26659018 26665087 + MGP_CBAJ_P0081975 Cyp2a5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081995.1 MGP_CBAJ_G0031555.1 mouse_genomes_project 7 27303876 27309044 + Cyp2a5 protein_coding processed_transcript MGP_CBAJ_T0081996.1 MGP_CBAJ_G0031555.1 mouse_genomes_project 7 27469368 27511019 + MGP_CBAJ_P0081996 Cyp2a5 protein_coding protein_coding MGP_CBAJ_T0081781.1 MGP_CBAJ_G0031511.1 mouse_genomes_project 7 24734369 24756067 - MGP_CBAJ_P0081781 Gm4763 protein_coding protein_coding MGP_CBAJ_T0081782.1 MGP_CBAJ_G0031511.1 mouse_genomes_project 7 24749823 24751465 - Gm4763 protein_coding processed_transcript MGP_CBAJ_T0085368.1 MGP_CBAJ_G0032515.1 mouse_genomes_project 7 121701106 121709606 + MGP_CBAJ_P0085368 Akip1 protein_coding protein_coding MGP_CBAJ_T0085369.1 MGP_CBAJ_G0032515.1 mouse_genomes_project 7 121701168 121706390 + MGP_CBAJ_P0085369 Akip1 protein_coding protein_coding MGP_CBAJ_T0085370.1 MGP_CBAJ_G0032515.1 mouse_genomes_project 7 121706249 121709385 + Akip1 protein_coding processed_transcript MGP_CBAJ_T0102146.1 MGP_CBAJ_G0040175.1 mouse_genomes_project 7 52001134 52571838 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0002207.1 MGP_CBAJ_G0002122.1 mouse_genomes_project 7 70449836 70453239 - TEC TEC MGP_CBAJ_T0081799.1 MGP_CBAJ_G0031517.1 mouse_genomes_project 7 24969414 24974231 + MGP_CBAJ_P0081799 Cd79a protein_coding protein_coding MGP_CBAJ_T0010739.1 MGP_CBAJ_G0008877.1 mouse_genomes_project 7 47109786 47109859 + Mir7051 miRNA miRNA MGP_CBAJ_T0085468.1 MGP_CBAJ_G0032537.1 mouse_genomes_project 7 124258782 124354955 + MGP_CBAJ_P0085468 Usp47 protein_coding protein_coding MGP_CBAJ_T0085469.1 MGP_CBAJ_G0032537.1 mouse_genomes_project 7 124258984 124354960 + MGP_CBAJ_P0085469 Usp47 protein_coding unknown_likely_coding MGP_CBAJ_T0005177.1 MGP_CBAJ_G0004393.1 mouse_genomes_project 7 106862850 106867276 - Gm44633 antisense antisense MGP_CBAJ_T0082621.1 MGP_CBAJ_G0031715.1 mouse_genomes_project 7 32297730 32305308 - MGP_CBAJ_P0082621 Ffar2 protein_coding protein_coding MGP_CBAJ_T0082622.1 MGP_CBAJ_G0031715.1 mouse_genomes_project 7 32297739 32300518 - MGP_CBAJ_P0082622 Ffar2 protein_coding protein_coding MGP_CBAJ_T0082623.1 MGP_CBAJ_G0031715.1 mouse_genomes_project 7 32298494 32303181 - MGP_CBAJ_P0082623 Ffar2 protein_coding protein_coding MGP_CBAJ_T0082624.1 MGP_CBAJ_G0031715.1 mouse_genomes_project 7 32298946 32300517 - MGP_CBAJ_P0082624 Ffar2 protein_coding protein_coding MGP_CBAJ_T0082625.1 MGP_CBAJ_G0031715.1 mouse_genomes_project 7 32299064 32300356 - MGP_CBAJ_P0082625 Ffar2 protein_coding protein_coding MGP_CBAJ_T0082626.1 MGP_CBAJ_G0031715.1 mouse_genomes_project 7 32299091 32300526 - MGP_CBAJ_P0082626 Ffar2 protein_coding protein_coding MGP_CBAJ_T0085928.1 MGP_CBAJ_G0032641.1 mouse_genomes_project 7 139470450 139543414 - MGP_CBAJ_P0085928 Gtf3c1 protein_coding protein_coding MGP_CBAJ_T0085929.1 MGP_CBAJ_G0032641.1 mouse_genomes_project 7 139470450 139543311 - MGP_CBAJ_P0085929 Gtf3c1 protein_coding protein_coding MGP_CBAJ_T0085930.1 MGP_CBAJ_G0032641.1 mouse_genomes_project 7 139473679 139479474 - Gtf3c1 protein_coding retained_intron MGP_CBAJ_T0085931.1 MGP_CBAJ_G0032641.1 mouse_genomes_project 7 139477026 139485388 - MGP_CBAJ_P0085931 Gtf3c1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085932.1 MGP_CBAJ_G0032641.1 mouse_genomes_project 7 139494183 139543394 - Gtf3c1 protein_coding retained_intron MGP_CBAJ_T0085933.1 MGP_CBAJ_G0032641.1 mouse_genomes_project 7 139494495 139543376 - MGP_CBAJ_P0085933 Gtf3c1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085934.1 MGP_CBAJ_G0032641.1 mouse_genomes_project 7 139494615 139504627 - MGP_CBAJ_P0085934 Gtf3c1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085935.1 MGP_CBAJ_G0032641.1 mouse_genomes_project 7 139503277 139505394 - Gtf3c1 protein_coding retained_intron MGP_CBAJ_T0085936.1 MGP_CBAJ_G0032641.1 mouse_genomes_project 7 139526853 139535131 - Gtf3c1 protein_coding retained_intron MGP_CBAJ_T0085937.1 MGP_CBAJ_G0032641.1 mouse_genomes_project 7 139528862 139542170 - MGP_CBAJ_P0085937 Gtf3c1 protein_coding protein_coding MGP_CBAJ_T0084287.1 MGP_CBAJ_G0032093.1 mouse_genomes_project 7 89146798 89201851 + MGP_CBAJ_P0084287 Zfp592 protein_coding protein_coding MGP_CBAJ_T0084288.1 MGP_CBAJ_G0032093.1 mouse_genomes_project 7 89178860 89180034 + Zfp592 protein_coding processed_transcript MGP_CBAJ_T0084289.1 MGP_CBAJ_G0032093.1 mouse_genomes_project 7 89194491 89195053 + Zfp592 protein_coding retained_intron MGP_CBAJ_T0084290.1 MGP_CBAJ_G0032093.1 mouse_genomes_project 7 89194767 89198140 + Zfp592 protein_coding retained_intron MGP_CBAJ_T0082238.1 MGP_CBAJ_G0031629.1 mouse_genomes_project 7 29765397 29773786 - MGP_CBAJ_P0082238 Nfkbib protein_coding protein_coding MGP_CBAJ_T0082239.1 MGP_CBAJ_G0031629.1 mouse_genomes_project 7 29766178 29773660 - MGP_CBAJ_P0082239 Nfkbib protein_coding protein_coding MGP_CBAJ_T0082240.1 MGP_CBAJ_G0031629.1 mouse_genomes_project 7 29768916 29775151 - MGP_CBAJ_P0082240 Nfkbib protein_coding protein_coding MGP_CBAJ_T0008691.1 MGP_CBAJ_G0007009.1 mouse_genomes_project 7 389185 403263 - Gm44257 lincRNA lincRNA MGP_CBAJ_T0083499.1 MGP_CBAJ_G0031929.1 mouse_genomes_project 7 50278199 50333812 + MGP_CBAJ_P0083499 Nomo1 protein_coding protein_coding MGP_CBAJ_T0083500.1 MGP_CBAJ_G0031929.1 mouse_genomes_project 7 50294112 50294885 + Nomo1 protein_coding retained_intron MGP_CBAJ_T0083501.1 MGP_CBAJ_G0031929.1 mouse_genomes_project 7 50297673 50300697 + Nomo1 protein_coding retained_intron MGP_CBAJ_T0083502.1 MGP_CBAJ_G0031929.1 mouse_genomes_project 7 50301969 50304769 + Nomo1 protein_coding retained_intron MGP_CBAJ_T0083503.1 MGP_CBAJ_G0031929.1 mouse_genomes_project 7 50332244 50333404 + Nomo1 protein_coding retained_intron MGP_CBAJ_T0081146.1 MGP_CBAJ_G0031302.1 mouse_genomes_project 7 10578451 10596315 + MGP_CBAJ_P0081146 Zfp606 protein_coding protein_coding MGP_CBAJ_T0081147.1 MGP_CBAJ_G0031302.1 mouse_genomes_project 7 10578463 10583981 + Zfp606 protein_coding retained_intron MGP_CBAJ_T0081148.1 MGP_CBAJ_G0031302.1 mouse_genomes_project 7 10578521 10595638 + MGP_CBAJ_P0081148 Zfp606 protein_coding protein_coding MGP_CBAJ_T0081149.1 MGP_CBAJ_G0031302.1 mouse_genomes_project 7 10589592 10595629 + Zfp606 protein_coding retained_intron MGP_CBAJ_T0015540.1 MGP_CBAJ_G0013652.1 mouse_genomes_project 7 36114484 36114627 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015531.1 MGP_CBAJ_G0013643.1 mouse_genomes_project 7 32134462 32134990 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015669.1 MGP_CBAJ_G0013781.1 mouse_genomes_project 7 122609624 122610217 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008727.1 MGP_CBAJ_G0007041.1 mouse_genomes_project 7 36527847 36631559 + Gm12766 lincRNA lincRNA MGP_CBAJ_T0082237.1 MGP_CBAJ_G0031628.1 mouse_genomes_project 7 29763320 29766112 + MGP_CBAJ_P0082237 Ccer2 protein_coding protein_coding MGP_CBAJ_T0085148.1 MGP_CBAJ_G0032415.1 mouse_genomes_project 7 116674926 116675988 - MGP_CBAJ_P0085148 Olfr690 protein_coding protein_coding MGP_CBAJ_T0005143.1 MGP_CBAJ_G0004369.1 mouse_genomes_project 7 79091134 79093831 + Gm45107 antisense antisense MGP_CBAJ_T0086712.1 MGP_CBAJ_G0032785.1 mouse_genomes_project 7 147479144 147548061 - MGP_CBAJ_P0086712 Fam53b protein_coding protein_coding MGP_CBAJ_T0086713.1 MGP_CBAJ_G0032785.1 mouse_genomes_project 7 147527346 147588086 - MGP_CBAJ_P0086713 Fam53b protein_coding protein_coding MGP_CBAJ_T0086714.1 MGP_CBAJ_G0032785.1 mouse_genomes_project 7 147527346 147555021 - MGP_CBAJ_P0086714 Fam53b protein_coding protein_coding MGP_CBAJ_T0086715.1 MGP_CBAJ_G0032785.1 mouse_genomes_project 7 147528181 147588720 - MGP_CBAJ_P0086715 Fam53b protein_coding protein_coding MGP_CBAJ_T0086716.1 MGP_CBAJ_G0032785.1 mouse_genomes_project 7 147547211 147578139 - MGP_CBAJ_P0086716 Fam53b protein_coding protein_coding MGP_CBAJ_T0086717.1 MGP_CBAJ_G0032785.1 mouse_genomes_project 7 147547322 147548399 - Fam53b protein_coding processed_transcript MGP_CBAJ_T0086718.1 MGP_CBAJ_G0032785.1 mouse_genomes_project 7 147547381 147573509 - Fam53b protein_coding processed_transcript MGP_CBAJ_T0005239.1 MGP_CBAJ_G0004437.1 mouse_genomes_project 7 160411884 160460385 - Gm14372 antisense antisense MGP_CBAJ_T0102163.1 MGP_CBAJ_G0040192.1 mouse_genomes_project 7 53254417 53255201 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015473.1 MGP_CBAJ_G0013585.1 mouse_genomes_project 7 10617225 10618189 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0082326.1 MGP_CBAJ_G0031647.1 mouse_genomes_project 7 30390614 30401149 - MGP_CBAJ_P0082326 Kcnk6 protein_coding protein_coding MGP_CBAJ_T0002223.1 MGP_CBAJ_G0002137.1 mouse_genomes_project 7 82865406 82867037 + TEC TEC MGP_CBAJ_T0081268.1 MGP_CBAJ_G0031347.1 mouse_genomes_project 7 13099785 13176621 + MGP_CBAJ_P0081268 protein_coding protein_coding MGP_CBAJ_T0081271.1 MGP_CBAJ_G0031347.1 mouse_genomes_project 7 13100033 13177765 + MGP_CBAJ_P0081271 protein_coding protein_coding MGP_CBAJ_T0081997.1 MGP_CBAJ_G0031564.1 mouse_genomes_project 7 27600322 27615099 + protein_coding retained_intron MGP_CBAJ_T0081998.1 MGP_CBAJ_G0031564.1 mouse_genomes_project 7 27600326 27614674 + MGP_CBAJ_P0081998 protein_coding protein_coding MGP_CBAJ_T0008842.1 MGP_CBAJ_G0007126.1 mouse_genomes_project 7 87501933 87503246 - Gm45168 lincRNA lincRNA MGP_CBAJ_T0008843.1 MGP_CBAJ_G0007126.1 mouse_genomes_project 7 87502074 87503257 - Gm45168 lincRNA lincRNA MGP_CBAJ_T0082416.1 MGP_CBAJ_G0031670.1 mouse_genomes_project 7 31479361 31492192 + MGP_CBAJ_P0082416 Zfp382 protein_coding protein_coding MGP_CBAJ_T0082417.1 MGP_CBAJ_G0031670.1 mouse_genomes_project 7 31479389 31488343 + MGP_CBAJ_P0082417 Zfp382 protein_coding protein_coding MGP_CBAJ_T0082418.1 MGP_CBAJ_G0031670.1 mouse_genomes_project 7 31483113 31491072 + Zfp382 protein_coding retained_intron MGP_CBAJ_T0101367.1 MGP_CBAJ_G0039442.1 mouse_genomes_project 7 12948980 13047913 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101368.1 MGP_CBAJ_G0039442.1 mouse_genomes_project 7 12984913 13047863 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101369.1 MGP_CBAJ_G0039442.1 mouse_genomes_project 7 12986852 13047913 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0010781.1 MGP_CBAJ_G0008919.1 mouse_genomes_project 7 89769394 89769467 + Mir1839 miRNA miRNA MGP_CBAJ_T0080749.1 MGP_CBAJ_G0031177.1 mouse_genomes_project 7 175831 222042 - MGP_CBAJ_P0080749 Nlrp12 protein_coding protein_coding MGP_CBAJ_T0080750.1 MGP_CBAJ_G0031177.1 mouse_genomes_project 7 208902 222169 - Nlrp12 protein_coding retained_intron MGP_CBAJ_T0081442.1 MGP_CBAJ_G0031402.1 mouse_genomes_project 7 17833893 17874355 - MGP_CBAJ_P0081442 Psg25 protein_coding protein_coding MGP_CBAJ_T0084293.1 MGP_CBAJ_G0032095.1 mouse_genomes_project 7 89300020 89365098 + MGP_CBAJ_P0084293 Slc28a1 protein_coding protein_coding MGP_CBAJ_T0084294.1 MGP_CBAJ_G0032095.1 mouse_genomes_project 7 89300075 89365098 + MGP_CBAJ_P0084294 Slc28a1 protein_coding protein_coding MGP_CBAJ_T0081035.1 MGP_CBAJ_G0031238.1 mouse_genomes_project 7 2270417 2276774 + MGP_CBAJ_P0081035 protein_coding protein_coding MGP_CBAJ_T0005142.1 MGP_CBAJ_G0004368.1 mouse_genomes_project 7 72414351 72477374 - Gm26827 antisense antisense MGP_CBAJ_T0084559.1 MGP_CBAJ_G0032189.1 mouse_genomes_project 7 107464246 107486693 + MGP_CBAJ_P0084559 Alg8 protein_coding protein_coding MGP_CBAJ_T0084560.1 MGP_CBAJ_G0032189.1 mouse_genomes_project 7 107479339 107486255 + Alg8 protein_coding retained_intron MGP_CBAJ_T0084561.1 MGP_CBAJ_G0032189.1 mouse_genomes_project 7 107479596 107486589 + Alg8 protein_coding processed_transcript MGP_CBAJ_T0084562.1 MGP_CBAJ_G0032189.1 mouse_genomes_project 7 107479924 107486152 + Alg8 protein_coding processed_transcript MGP_CBAJ_T0084563.1 MGP_CBAJ_G0032189.1 mouse_genomes_project 7 107480746 107486313 + Alg8 protein_coding retained_intron MGP_CBAJ_T0084564.1 MGP_CBAJ_G0032189.1 mouse_genomes_project 7 107485280 107486396 + Alg8 protein_coding retained_intron MGP_CBAJ_T0086443.1 MGP_CBAJ_G0032729.1 mouse_genomes_project 7 142065253 142078823 - MGP_CBAJ_P0086443 Zfp668 protein_coding protein_coding MGP_CBAJ_T0086444.1 MGP_CBAJ_G0032729.1 mouse_genomes_project 7 142067923 142078775 - MGP_CBAJ_P0086444 Zfp668 protein_coding protein_coding MGP_CBAJ_T0086445.1 MGP_CBAJ_G0032729.1 mouse_genomes_project 7 142068199 142077641 - MGP_CBAJ_P0086445 Zfp668 protein_coding protein_coding MGP_CBAJ_T0086446.1 MGP_CBAJ_G0032729.1 mouse_genomes_project 7 142068199 142078772 - MGP_CBAJ_P0086446 Zfp668 protein_coding protein_coding MGP_CBAJ_T0086447.1 MGP_CBAJ_G0032729.1 mouse_genomes_project 7 142070247 142077652 - MGP_CBAJ_P0086447 Zfp668 protein_coding protein_coding MGP_CBAJ_T0086448.1 MGP_CBAJ_G0032729.1 mouse_genomes_project 7 142075774 142078129 - Zfp668 protein_coding processed_transcript MGP_CBAJ_T0008808.1 MGP_CBAJ_G0007103.1 mouse_genomes_project 7 80226220 80229414 + Gm44725 lincRNA lincRNA MGP_CBAJ_T0081850.1 MGP_CBAJ_G0031525.1 mouse_genomes_project 7 25333357 25356339 - Dedd2 protein_coding processed_transcript MGP_CBAJ_T0081851.1 MGP_CBAJ_G0031525.1 mouse_genomes_project 7 25336982 25356378 - MGP_CBAJ_P0081851 Dedd2 protein_coding unknown_likely_coding MGP_CBAJ_T0081852.1 MGP_CBAJ_G0031525.1 mouse_genomes_project 7 25350326 25356351 - Dedd2 protein_coding retained_intron MGP_CBAJ_T0083351.1 MGP_CBAJ_G0031890.1 mouse_genomes_project 7 49521353 49524787 + MGP_CBAJ_P0083351 Ntf5 protein_coding protein_coding MGP_CBAJ_T0083021.1 MGP_CBAJ_G0031804.1 mouse_genomes_project 7 47151207 47166978 - MGP_CBAJ_P0083021 4931406B18Rik protein_coding protein_coding MGP_CBAJ_T0083022.1 MGP_CBAJ_G0031804.1 mouse_genomes_project 7 47154815 47166672 - MGP_CBAJ_P0083022 4931406B18Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0083023.1 MGP_CBAJ_G0031804.1 mouse_genomes_project 7 47155561 47166967 - MGP_CBAJ_P0083023 4931406B18Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0083024.1 MGP_CBAJ_G0031804.1 mouse_genomes_project 7 47157685 47165243 - MGP_CBAJ_P0083024 4931406B18Rik protein_coding protein_coding MGP_CBAJ_T0083025.1 MGP_CBAJ_G0031804.1 mouse_genomes_project 7 47158767 47166973 - 4931406B18Rik protein_coding retained_intron MGP_CBAJ_T0083026.1 MGP_CBAJ_G0031804.1 mouse_genomes_project 7 47159415 47166980 - MGP_CBAJ_P0083026 4931406B18Rik protein_coding protein_coding MGP_CBAJ_T0083027.1 MGP_CBAJ_G0031804.1 mouse_genomes_project 7 47162259 47166734 - MGP_CBAJ_P0083027 4931406B18Rik protein_coding protein_coding MGP_CBAJ_T0081349.1 MGP_CBAJ_G0031372.1 mouse_genomes_project 7 15428406 15557184 - MGP_CBAJ_P0081349 Arhgap35 protein_coding protein_coding MGP_CBAJ_T0081350.1 MGP_CBAJ_G0031372.1 mouse_genomes_project 7 15430956 15557128 - MGP_CBAJ_P0081350 Arhgap35 protein_coding protein_coding MGP_CBAJ_T0084479.1 MGP_CBAJ_G0032168.1 mouse_genomes_project 7 99147136 99175208 - MGP_CBAJ_P0084479 Eed protein_coding protein_coding MGP_CBAJ_T0084480.1 MGP_CBAJ_G0032168.1 mouse_genomes_project 7 99171004 99174795 - Eed protein_coding processed_transcript MGP_CBAJ_T0099477.1 MGP_CBAJ_G0037732.1 mouse_genomes_project 7 15972523 15972630 - Gm25815 snRNA snRNA MGP_CBAJ_T0015706.1 MGP_CBAJ_G0013818.1 mouse_genomes_project 7 155244490 155244901 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002158.1 MGP_CBAJ_G0002073.1 mouse_genomes_project 7 15897580 15899267 - TEC TEC MGP_CBAJ_T0102200.1 MGP_CBAJ_G0040229.1 mouse_genomes_project 7 114142642 114143495 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0102109.1 MGP_CBAJ_G0040138.1 mouse_genomes_project 7 32803192 32803579 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0101180.1 MGP_CBAJ_G0039350.1 mouse_genomes_project 7 75183724 75185278 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101181.1 MGP_CBAJ_G0039350.1 mouse_genomes_project 7 75184106 75184826 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0008886.1 MGP_CBAJ_G0007152.1 mouse_genomes_project 7 126166380 126191472 + Gm29507 lincRNA lincRNA MGP_CBAJ_T0083608.1 MGP_CBAJ_G0031965.1 mouse_genomes_project 7 53514472 53529640 - MGP_CBAJ_P0083608 E2f8 protein_coding protein_coding MGP_CBAJ_T0083609.1 MGP_CBAJ_G0031965.1 mouse_genomes_project 7 53514472 53529085 - MGP_CBAJ_P0083609 E2f8 protein_coding protein_coding MGP_CBAJ_T0083610.1 MGP_CBAJ_G0031965.1 mouse_genomes_project 7 53520150 53523295 - E2f8 protein_coding retained_intron MGP_CBAJ_T0083611.1 MGP_CBAJ_G0031965.1 mouse_genomes_project 7 53526876 53529048 - E2f8 protein_coding retained_intron MGP_CBAJ_T0085294.1 MGP_CBAJ_G0032467.1 mouse_genomes_project 7 119294953 119316168 + MGP_CBAJ_P0085294 Olfml1 protein_coding protein_coding MGP_CBAJ_T0082942.1 MGP_CBAJ_G0031776.1 mouse_genomes_project 7 42363002 42384303 + MGP_CBAJ_P0082942 Zfp619 protein_coding protein_coding MGP_CBAJ_T0005235.1 MGP_CBAJ_G0004433.1 mouse_genomes_project 7 159039251 159044829 - Gm28821 antisense antisense MGP_CBAJ_T0084502.1 MGP_CBAJ_G0032175.1 mouse_genomes_project 7 99715193 99722165 - MGP_CBAJ_P0084502 Tmem126a protein_coding nonsense_mediated_decay MGP_CBAJ_T0084503.1 MGP_CBAJ_G0032175.1 mouse_genomes_project 7 99715198 99722186 - MGP_CBAJ_P0084503 Tmem126a protein_coding protein_coding MGP_CBAJ_T0084504.1 MGP_CBAJ_G0032175.1 mouse_genomes_project 7 99720161 99722165 - Tmem126a protein_coding retained_intron MGP_CBAJ_T0083086.1 MGP_CBAJ_G0031828.1 mouse_genomes_project 7 48218218 48222434 - MGP_CBAJ_P0083086 Clec11a protein_coding protein_coding MGP_CBAJ_T0086951.1 MGP_CBAJ_G0032848.1 mouse_genomes_project 7 155937179 155938109 - MGP_CBAJ_P0086951 Olfr532 protein_coding protein_coding MGP_CBAJ_T0008796.1 MGP_CBAJ_G0007092.1 mouse_genomes_project 7 74870989 74885536 - Gm16158 lincRNA lincRNA MGP_CBAJ_T0008797.1 MGP_CBAJ_G0007092.1 mouse_genomes_project 7 74870989 74885517 - Gm16158 lincRNA lincRNA MGP_CBAJ_T0081636.1 MGP_CBAJ_G0031459.1 mouse_genomes_project 7 19308593 19352704 - MGP_CBAJ_P0081636 Nectin2 protein_coding protein_coding MGP_CBAJ_T0081637.1 MGP_CBAJ_G0031459.1 mouse_genomes_project 7 19319798 19352704 - MGP_CBAJ_P0081637 Nectin2 protein_coding protein_coding MGP_CBAJ_T0081988.1 MGP_CBAJ_G0031560.1 mouse_genomes_project 7 27042393 27064612 - MGP_CBAJ_P0081988 protein_coding protein_coding MGP_CBAJ_T0083649.1 MGP_CBAJ_G0031973.1 mouse_genomes_project 7 56462286 56568951 + MGP_CBAJ_P0083649 Ano5 protein_coding unknown_likely_coding MGP_CBAJ_T0083650.1 MGP_CBAJ_G0031973.1 mouse_genomes_project 7 56463063 56573857 + MGP_CBAJ_P0083650 Ano5 protein_coding protein_coding MGP_CBAJ_T0081857.1 MGP_CBAJ_G0031528.1 mouse_genomes_project 7 25379007 25390306 - MGP_CBAJ_P0081857 Erf protein_coding protein_coding MGP_CBAJ_T0081858.1 MGP_CBAJ_G0031528.1 mouse_genomes_project 7 25381806 25390275 - MGP_CBAJ_P0081858 Erf protein_coding protein_coding MGP_CBAJ_T0081531.1 MGP_CBAJ_G0031430.1 mouse_genomes_project 7 18728739 18743141 + MGP_CBAJ_P0081531 Gpr4 protein_coding protein_coding MGP_CBAJ_T0010758.1 MGP_CBAJ_G0008896.1 mouse_genomes_project 7 67570020 67570089 - Gm22466 miRNA miRNA MGP_CBAJ_T0008718.1 MGP_CBAJ_G0007032.1 mouse_genomes_project 7 26090145 26100281 + Gm30146 lincRNA lincRNA MGP_CBAJ_T0008721.1 MGP_CBAJ_G0007035.1 mouse_genomes_project 7 31567719 31569979 + lincRNA lincRNA MGP_CBAJ_T0087255.1 MGP_CBAJ_G0032925.1 mouse_genomes_project 7 158282594 158287595 + Syt8 protein_coding processed_transcript MGP_CBAJ_T0087256.1 MGP_CBAJ_G0032925.1 mouse_genomes_project 7 158282690 158286688 + Syt8 protein_coding processed_transcript MGP_CBAJ_T0087257.1 MGP_CBAJ_G0032925.1 mouse_genomes_project 7 158282721 158288116 + MGP_CBAJ_P0087257 Syt8 protein_coding protein_coding MGP_CBAJ_T0087258.1 MGP_CBAJ_G0032925.1 mouse_genomes_project 7 158282745 158288048 + Syt8 protein_coding retained_intron MGP_CBAJ_T0087259.1 MGP_CBAJ_G0032925.1 mouse_genomes_project 7 158282745 158288048 + MGP_CBAJ_P0087259 Syt8 protein_coding protein_coding MGP_CBAJ_T0087260.1 MGP_CBAJ_G0032925.1 mouse_genomes_project 7 158282745 158288048 + MGP_CBAJ_P0087260 Syt8 protein_coding protein_coding MGP_CBAJ_T0087261.1 MGP_CBAJ_G0032925.1 mouse_genomes_project 7 158284562 158288025 + MGP_CBAJ_P0087261 Syt8 protein_coding protein_coding MGP_CBAJ_T0087262.1 MGP_CBAJ_G0032925.1 mouse_genomes_project 7 158285851 158286262 + MGP_CBAJ_P0087262 Syt8 protein_coding protein_coding MGP_CBAJ_T0087263.1 MGP_CBAJ_G0032925.1 mouse_genomes_project 7 158286140 158287704 + Syt8 protein_coding retained_intron MGP_CBAJ_T0087264.1 MGP_CBAJ_G0032925.1 mouse_genomes_project 7 158286734 158288032 + Syt8 protein_coding retained_intron MGP_CBAJ_T0084611.1 MGP_CBAJ_G0032199.1 mouse_genomes_project 7 108090300 108221259 + MGP_CBAJ_P0084611 Gdpd4 protein_coding protein_coding MGP_CBAJ_T0084612.1 MGP_CBAJ_G0032199.1 mouse_genomes_project 7 108124970 108220207 + MGP_CBAJ_P0084612 Gdpd4 protein_coding protein_coding MGP_CBAJ_T0084674.1 MGP_CBAJ_G0032211.1 mouse_genomes_project 7 109160234 109461447 - MGP_CBAJ_P0084674 Uvrag protein_coding protein_coding MGP_CBAJ_T0015627.1 MGP_CBAJ_G0013739.1 mouse_genomes_project 7 93507736 93508859 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008707.1 MGP_CBAJ_G0007023.1 mouse_genomes_project 7 19170476 19175485 - Gm26890 lincRNA lincRNA MGP_CBAJ_T0102071.1 MGP_CBAJ_G0040101.1 mouse_genomes_project 7 10492554 10496290 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0100744.1 MGP_CBAJ_G0038999.1 mouse_genomes_project 7 74020436 74020573 - Gm23233 snoRNA snoRNA MGP_CBAJ_T0010740.1 MGP_CBAJ_G0008878.1 mouse_genomes_project 7 48420249 48420314 + Mir7052 miRNA miRNA MGP_CBAJ_T0082213.1 MGP_CBAJ_G0031622.1 mouse_genomes_project 7 29501506 29507928 - MGP_CBAJ_P0082213 Nccrp1 protein_coding protein_coding MGP_CBAJ_T0010789.1 MGP_CBAJ_G0008927.1 mouse_genomes_project 7 121496806 121496926 + miRNA miRNA MGP_CBAJ_T0085319.1 MGP_CBAJ_G0032490.1 mouse_genomes_project 7 120238676 120239669 + MGP_CBAJ_P0085319 protein_coding protein_coding MGP_CBAJ_T0008697.1 MGP_CBAJ_G0007015.1 mouse_genomes_project 7 11089654 11105904 - 1810019N24Rik lincRNA lincRNA MGP_CBAJ_T0008698.1 MGP_CBAJ_G0007015.1 mouse_genomes_project 7 11090752 11091129 - 1810019N24Rik lincRNA lincRNA MGP_CBAJ_T0085754.1 MGP_CBAJ_G0032601.1 mouse_genomes_project 7 133891324 133915617 + MGP_CBAJ_P0085754 Uqcrc2 protein_coding protein_coding MGP_CBAJ_T0085755.1 MGP_CBAJ_G0032601.1 mouse_genomes_project 7 133891388 133899366 + Uqcrc2 protein_coding processed_transcript MGP_CBAJ_T0085756.1 MGP_CBAJ_G0032601.1 mouse_genomes_project 7 133891663 133901391 + Uqcrc2 protein_coding processed_transcript MGP_CBAJ_T0085757.1 MGP_CBAJ_G0032601.1 mouse_genomes_project 7 133893810 133915300 + Uqcrc2 protein_coding processed_transcript MGP_CBAJ_T0085758.1 MGP_CBAJ_G0032601.1 mouse_genomes_project 7 133901066 133907079 + Uqcrc2 protein_coding retained_intron MGP_CBAJ_T0085759.1 MGP_CBAJ_G0032601.1 mouse_genomes_project 7 133907428 133914008 + Uqcrc2 protein_coding retained_intron MGP_CBAJ_T0082022.1 MGP_CBAJ_G0031572.1 mouse_genomes_project 7 27824774 27832128 - Snrpa protein_coding retained_intron MGP_CBAJ_T0082023.1 MGP_CBAJ_G0031572.1 mouse_genomes_project 7 27824776 27838870 - MGP_CBAJ_P0082023 Snrpa protein_coding protein_coding MGP_CBAJ_T0082024.1 MGP_CBAJ_G0031572.1 mouse_genomes_project 7 27824776 27839355 - MGP_CBAJ_P0082024 Snrpa protein_coding protein_coding MGP_CBAJ_T0082025.1 MGP_CBAJ_G0031572.1 mouse_genomes_project 7 27824776 27839381 - MGP_CBAJ_P0082025 Snrpa protein_coding protein_coding MGP_CBAJ_T0082026.1 MGP_CBAJ_G0031572.1 mouse_genomes_project 7 27830444 27838870 - MGP_CBAJ_P0082026 Snrpa protein_coding protein_coding MGP_CBAJ_T0082027.1 MGP_CBAJ_G0031572.1 mouse_genomes_project 7 27834827 27839134 - MGP_CBAJ_P0082027 Snrpa protein_coding nonsense_mediated_decay MGP_CBAJ_T0082028.1 MGP_CBAJ_G0031572.1 mouse_genomes_project 7 27837573 27839263 - Snrpa protein_coding retained_intron MGP_CBAJ_T0015628.1 MGP_CBAJ_G0013740.1 mouse_genomes_project 7 93974476 93975122 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0085281.1 MGP_CBAJ_G0032459.1 mouse_genomes_project 7 118790902 118791856 + MGP_CBAJ_P0085281 Olfr714 protein_coding protein_coding MGP_CBAJ_T0100719.1 MGP_CBAJ_G0038974.1 mouse_genomes_project 7 14776837 14776946 - Snord23 snoRNA snoRNA MGP_CBAJ_T0085283.1 MGP_CBAJ_G0032461.1 mouse_genomes_project 7 118812499 118813629 - MGP_CBAJ_P0085283 protein_coding protein_coding MGP_CBAJ_T0086522.1 MGP_CBAJ_G0032747.1 mouse_genomes_project 7 142515664 142516419 + Armc5 protein_coding processed_transcript MGP_CBAJ_T0086523.1 MGP_CBAJ_G0032747.1 mouse_genomes_project 7 142515679 142525281 + MGP_CBAJ_P0086523 Armc5 protein_coding protein_coding MGP_CBAJ_T0102050.1 MGP_CBAJ_G0040080.1 mouse_genomes_project 7 8049000 8049907 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010810.1 MGP_CBAJ_G0008948.1 mouse_genomes_project 7 156873601 156873711 - Mir210 miRNA miRNA MGP_CBAJ_T0015453.1 MGP_CBAJ_G0013565.1 mouse_genomes_project 7 841196 842073 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005551.1 MGP_CBAJ_G0004668.1 mouse_genomes_project 7 72146602 72147589 - Gm20684 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_CBAJ_T0085332.1 MGP_CBAJ_G0032503.1 mouse_genomes_project 7 120748863 120802034 - MGP_CBAJ_P0085332 Olfr519 protein_coding protein_coding MGP_CBAJ_T0085333.1 MGP_CBAJ_G0032503.1 mouse_genomes_project 7 120748863 120802019 - MGP_CBAJ_P0085333 Olfr519 protein_coding protein_coding MGP_CBAJ_T0002198.1 MGP_CBAJ_G0002113.1 mouse_genomes_project 7 61398972 61400299 - TEC TEC MGP_CBAJ_T0084054.1 MGP_CBAJ_G0032055.1 mouse_genomes_project 7 86994665 87004640 - Mfge8 protein_coding retained_intron MGP_CBAJ_T0084055.1 MGP_CBAJ_G0032055.1 mouse_genomes_project 7 86994665 87012813 - MGP_CBAJ_P0084055 Mfge8 protein_coding protein_coding MGP_CBAJ_T0084056.1 MGP_CBAJ_G0032055.1 mouse_genomes_project 7 86994666 87012820 - MGP_CBAJ_P0084056 Mfge8 protein_coding protein_coding MGP_CBAJ_T0084057.1 MGP_CBAJ_G0032055.1 mouse_genomes_project 7 86995013 87012791 - MGP_CBAJ_P0084057 Mfge8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084058.1 MGP_CBAJ_G0032055.1 mouse_genomes_project 7 86995036 86997885 - Mfge8 protein_coding retained_intron MGP_CBAJ_T0084059.1 MGP_CBAJ_G0032055.1 mouse_genomes_project 7 86997392 87003661 - Mfge8 protein_coding retained_intron MGP_CBAJ_T0084060.1 MGP_CBAJ_G0032055.1 mouse_genomes_project 7 87002731 87003904 - Mfge8 protein_coding retained_intron MGP_CBAJ_T0084061.1 MGP_CBAJ_G0032055.1 mouse_genomes_project 7 87003722 87008311 - Mfge8 protein_coding processed_transcript MGP_CBAJ_T0084062.1 MGP_CBAJ_G0032055.1 mouse_genomes_project 7 87005776 87012749 - Mfge8 protein_coding retained_intron MGP_CBAJ_T0084063.1 MGP_CBAJ_G0032055.1 mouse_genomes_project 7 87006190 87008981 - Mfge8 protein_coding processed_transcript MGP_CBAJ_T0082527.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986594 31988648 + U2af1l4 protein_coding processed_transcript MGP_CBAJ_T0082528.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986600 31988419 + U2af1l4 protein_coding processed_transcript MGP_CBAJ_T0082529.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986612 31987775 + MGP_CBAJ_P0082529 U2af1l4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082530.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986614 31988659 + MGP_CBAJ_P0082530 U2af1l4 protein_coding protein_coding MGP_CBAJ_T0082531.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986618 31988656 + MGP_CBAJ_P0082531 U2af1l4 protein_coding protein_coding MGP_CBAJ_T0082532.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986619 31987901 + U2af1l4 protein_coding retained_intron MGP_CBAJ_T0082533.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986619 31988645 + MGP_CBAJ_P0082533 U2af1l4 protein_coding protein_coding MGP_CBAJ_T0082534.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986622 31987905 + U2af1l4 protein_coding retained_intron MGP_CBAJ_T0082535.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986623 31987902 + U2af1l4 protein_coding retained_intron MGP_CBAJ_T0082536.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986629 31988454 + MGP_CBAJ_P0082536 U2af1l4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082537.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986631 31988092 + MGP_CBAJ_P0082537 U2af1l4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082538.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986632 31988458 + MGP_CBAJ_P0082538 U2af1l4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082539.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986633 31987353 + U2af1l4 protein_coding retained_intron MGP_CBAJ_T0082540.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986635 31988538 + U2af1l4 protein_coding retained_intron MGP_CBAJ_T0082541.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986637 31991252 + MGP_CBAJ_P0082541 U2af1l4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082542.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986637 31988032 + MGP_CBAJ_P0082542 U2af1l4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082543.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986639 31987795 + U2af1l4 protein_coding retained_intron MGP_CBAJ_T0082544.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986641 31988658 + MGP_CBAJ_P0082544 U2af1l4 protein_coding protein_coding MGP_CBAJ_T0082545.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986642 31987352 + U2af1l4 protein_coding retained_intron MGP_CBAJ_T0082546.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986643 31988655 + U2af1l4 protein_coding processed_transcript MGP_CBAJ_T0082547.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986643 31991254 + MGP_CBAJ_P0082547 U2af1l4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082548.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986648 31991249 + MGP_CBAJ_P0082548 U2af1l4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082549.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986649 31988473 + MGP_CBAJ_P0082549 U2af1l4 protein_coding protein_coding MGP_CBAJ_T0082550.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986649 31988473 + MGP_CBAJ_P0082550 U2af1l4 protein_coding protein_coding MGP_CBAJ_T0082551.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986649 31988473 + MGP_CBAJ_P0082551 U2af1l4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082552.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986649 31988473 + MGP_CBAJ_P0082552 U2af1l4 protein_coding protein_coding MGP_CBAJ_T0082553.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986651 31988653 + U2af1l4 protein_coding processed_transcript MGP_CBAJ_T0082554.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986651 31987842 + MGP_CBAJ_P0082554 U2af1l4 protein_coding protein_coding MGP_CBAJ_T0082555.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986652 31990693 + U2af1l4 protein_coding retained_intron MGP_CBAJ_T0082556.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986653 31987770 + U2af1l4 protein_coding retained_intron MGP_CBAJ_T0082557.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986660 31988466 + U2af1l4 protein_coding processed_transcript MGP_CBAJ_T0082558.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986671 31988658 + U2af1l4 protein_coding retained_intron MGP_CBAJ_T0082559.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986686 31987649 + U2af1l4 protein_coding retained_intron MGP_CBAJ_T0082560.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986688 31988473 + MGP_CBAJ_P0082560 U2af1l4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082561.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31986690 31988473 + MGP_CBAJ_P0082561 U2af1l4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082562.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31987119 31987901 + U2af1l4 protein_coding retained_intron MGP_CBAJ_T0082563.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31987164 31987572 + U2af1l4 protein_coding processed_transcript MGP_CBAJ_T0082564.1 MGP_CBAJ_G0031698.1 mouse_genomes_project 7 31987172 31988473 + MGP_CBAJ_P0082564 U2af1l4 protein_coding protein_coding MGP_CBAJ_T0005159.1 MGP_CBAJ_G0004380.1 mouse_genomes_project 7 88092321 88093781 - Gm44949 antisense antisense MGP_CBAJ_T0080768.1 MGP_CBAJ_G0031183.1 mouse_genomes_project 7 530998 547082 - MGP_CBAJ_P0080768 Tarm1 protein_coding protein_coding MGP_CBAJ_T0080769.1 MGP_CBAJ_G0031183.1 mouse_genomes_project 7 533016 547148 - MGP_CBAJ_P0080769 Tarm1 protein_coding protein_coding MGP_CBAJ_T0080770.1 MGP_CBAJ_G0031183.1 mouse_genomes_project 7 533517 547042 - MGP_CBAJ_P0080770 Tarm1 protein_coding protein_coding MGP_CBAJ_T0015548.1 MGP_CBAJ_G0013660.1 mouse_genomes_project 7 41964884 41973241 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099527.1 MGP_CBAJ_G0037782.1 mouse_genomes_project 7 142303648 142303804 - Gm22809 snRNA snRNA MGP_CBAJ_T0015673.1 MGP_CBAJ_G0013785.1 mouse_genomes_project 7 127761065 127761405 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0087031.1 MGP_CBAJ_G0032879.1 mouse_genomes_project 7 156719687 156729077 - MGP_CBAJ_P0087031 Sigirr protein_coding protein_coding MGP_CBAJ_T0102165.1 MGP_CBAJ_G0040194.1 mouse_genomes_project 7 93372164 93374297 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0102114.1 MGP_CBAJ_G0040143.1 mouse_genomes_project 7 35738255 35739081 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0083108.1 MGP_CBAJ_G0031833.1 mouse_genomes_project 7 48415292 48417661 + MGP_CBAJ_P0083108 Aspdh protein_coding protein_coding MGP_CBAJ_T0083109.1 MGP_CBAJ_G0031833.1 mouse_genomes_project 7 48415310 48417237 + MGP_CBAJ_P0083109 Aspdh protein_coding protein_coding MGP_CBAJ_T0083110.1 MGP_CBAJ_G0031833.1 mouse_genomes_project 7 48415318 48417124 + MGP_CBAJ_P0083110 Aspdh protein_coding nonsense_mediated_decay MGP_CBAJ_T0083111.1 MGP_CBAJ_G0031833.1 mouse_genomes_project 7 48415327 48417115 + Aspdh protein_coding retained_intron MGP_CBAJ_T0083112.1 MGP_CBAJ_G0031833.1 mouse_genomes_project 7 48415345 48417219 + Aspdh protein_coding processed_transcript MGP_CBAJ_T0083113.1 MGP_CBAJ_G0031833.1 mouse_genomes_project 7 48416371 48417598 + MGP_CBAJ_P0083113 Aspdh protein_coding protein_coding MGP_CBAJ_T0081895.1 MGP_CBAJ_G0031536.1 mouse_genomes_project 7 25579949 25597607 - MGP_CBAJ_P0081895 Cxcl17 protein_coding protein_coding MGP_CBAJ_T0081896.1 MGP_CBAJ_G0031536.1 mouse_genomes_project 7 25579949 25597607 - MGP_CBAJ_P0081896 Cxcl17 protein_coding protein_coding MGP_CBAJ_T0081680.1 MGP_CBAJ_G0031480.1 mouse_genomes_project 7 23800207 23801180 + MGP_CBAJ_P0081680 protein_coding protein_coding MGP_CBAJ_T0015671.1 MGP_CBAJ_G0013783.1 mouse_genomes_project 7 125725938 125726340 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0082160.1 MGP_CBAJ_G0031606.1 mouse_genomes_project 7 29183943 29190420 - MGP_CBAJ_P0082160 protein_coding protein_coding MGP_CBAJ_T0082161.1 MGP_CBAJ_G0031606.1 mouse_genomes_project 7 29183943 29190472 - MGP_CBAJ_P0082161 protein_coding protein_coding MGP_CBAJ_T0082162.1 MGP_CBAJ_G0031606.1 mouse_genomes_project 7 29186351 29187474 - MGP_CBAJ_P0082162 protein_coding protein_coding MGP_CBAJ_T0087032.1 MGP_CBAJ_G0032880.1 mouse_genomes_project 7 156729749 156746319 - MGP_CBAJ_P0087032 Ano9 protein_coding protein_coding MGP_CBAJ_T0015538.1 MGP_CBAJ_G0013650.1 mouse_genomes_project 7 35921251 35921318 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0084197.1 MGP_CBAJ_G0032081.1 mouse_genomes_project 7 88369007 88384586 - MGP_CBAJ_P0084197 Unc45a protein_coding protein_coding MGP_CBAJ_T0084198.1 MGP_CBAJ_G0032081.1 mouse_genomes_project 7 88369010 88383809 - MGP_CBAJ_P0084198 Unc45a protein_coding protein_coding MGP_CBAJ_T0084199.1 MGP_CBAJ_G0032081.1 mouse_genomes_project 7 88369011 88383761 - MGP_CBAJ_P0084199 Unc45a protein_coding nonsense_mediated_decay MGP_CBAJ_T0084200.1 MGP_CBAJ_G0032081.1 mouse_genomes_project 7 88369041 88383352 - MGP_CBAJ_P0084200 Unc45a protein_coding protein_coding MGP_CBAJ_T0084201.1 MGP_CBAJ_G0032081.1 mouse_genomes_project 7 88377964 88383796 - MGP_CBAJ_P0084201 Unc45a protein_coding protein_coding MGP_CBAJ_T0084202.1 MGP_CBAJ_G0032081.1 mouse_genomes_project 7 88382060 88383791 - Unc45a protein_coding retained_intron MGP_CBAJ_T0084203.1 MGP_CBAJ_G0032081.1 mouse_genomes_project 7 88382610 88383738 - Unc45a protein_coding retained_intron MGP_CBAJ_T0084204.1 MGP_CBAJ_G0032081.1 mouse_genomes_project 7 88382898 88383807 - MGP_CBAJ_P0084204 Unc45a protein_coding protein_coding MGP_CBAJ_T0084205.1 MGP_CBAJ_G0032081.1 mouse_genomes_project 7 88382902 88383809 - Unc45a protein_coding processed_transcript MGP_CBAJ_T0084206.1 MGP_CBAJ_G0032081.1 mouse_genomes_project 7 88383293 88383801 - Unc45a protein_coding retained_intron MGP_CBAJ_T0086693.1 MGP_CBAJ_G0032777.1 mouse_genomes_project 7 146246319 146254126 + MGP_CBAJ_P0086693 Hmx2 protein_coding protein_coding MGP_CBAJ_T0086694.1 MGP_CBAJ_G0032777.1 mouse_genomes_project 7 146251597 146254126 + MGP_CBAJ_P0086694 Hmx2 protein_coding protein_coding MGP_CBAJ_T0085059.1 MGP_CBAJ_G0032354.1 mouse_genomes_project 7 115099962 115100901 + MGP_CBAJ_P0085059 Olfr633 protein_coding protein_coding MGP_CBAJ_T0100735.1 MGP_CBAJ_G0038990.1 mouse_genomes_project 7 65080474 65080543 - Gm25499 snoRNA snoRNA MGP_CBAJ_T0102083.1 MGP_CBAJ_G0040113.1 mouse_genomes_project 7 12993035 12993513 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099512.1 MGP_CBAJ_G0037767.1 mouse_genomes_project 7 121787563 121787670 - Gm22822 snRNA snRNA MGP_CBAJ_T0082083.1 MGP_CBAJ_G0031584.1 mouse_genomes_project 7 28196199 28199608 + MGP_CBAJ_P0082083 Sertad1 protein_coding protein_coding MGP_CBAJ_T0082084.1 MGP_CBAJ_G0031584.1 mouse_genomes_project 7 28196664 28198799 + MGP_CBAJ_P0082084 Sertad1 protein_coding protein_coding MGP_CBAJ_T0008693.1 MGP_CBAJ_G0007011.1 mouse_genomes_project 7 482131 514628 + Gm44160 lincRNA lincRNA MGP_CBAJ_T0015606.1 MGP_CBAJ_G0013718.1 mouse_genomes_project 7 76311268 76312267 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0102143.1 MGP_CBAJ_G0040172.1 mouse_genomes_project 7 51778556 51779011 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0082098.1 MGP_CBAJ_G0031588.1 mouse_genomes_project 7 28283602 28317457 + MGP_CBAJ_P0082098 2310022A10Rik protein_coding protein_coding MGP_CBAJ_T0082099.1 MGP_CBAJ_G0031588.1 mouse_genomes_project 7 28283636 28310076 + MGP_CBAJ_P0082099 2310022A10Rik protein_coding protein_coding MGP_CBAJ_T0082100.1 MGP_CBAJ_G0031588.1 mouse_genomes_project 7 28283639 28284441 + 2310022A10Rik protein_coding processed_transcript MGP_CBAJ_T0082101.1 MGP_CBAJ_G0031588.1 mouse_genomes_project 7 28283655 28317457 + MGP_CBAJ_P0082101 2310022A10Rik protein_coding protein_coding MGP_CBAJ_T0082102.1 MGP_CBAJ_G0031588.1 mouse_genomes_project 7 28289518 28317452 + MGP_CBAJ_P0082102 2310022A10Rik protein_coding protein_coding MGP_CBAJ_T0082103.1 MGP_CBAJ_G0031588.1 mouse_genomes_project 7 28289539 28308685 + 2310022A10Rik protein_coding retained_intron MGP_CBAJ_T0082104.1 MGP_CBAJ_G0031588.1 mouse_genomes_project 7 28298334 28315992 + MGP_CBAJ_P0082104 2310022A10Rik protein_coding protein_coding MGP_CBAJ_T0082105.1 MGP_CBAJ_G0031588.1 mouse_genomes_project 7 28309824 28315778 + 2310022A10Rik protein_coding processed_transcript MGP_CBAJ_T0010794.1 MGP_CBAJ_G0008932.1 mouse_genomes_project 7 130646567 130646672 + Gm24063 miRNA miRNA MGP_CBAJ_T0080766.1 MGP_CBAJ_G0031182.1 mouse_genomes_project 7 450556 464812 + MGP_CBAJ_P0080766 Cacng6 protein_coding protein_coding MGP_CBAJ_T0080767.1 MGP_CBAJ_G0031182.1 mouse_genomes_project 7 451023 464308 + MGP_CBAJ_P0080767 Cacng6 protein_coding protein_coding MGP_CBAJ_T0081667.1 MGP_CBAJ_G0031470.1 mouse_genomes_project 7 19667789 19701957 + MGP_CBAJ_P0081667 Nlrp9b protein_coding protein_coding MGP_CBAJ_T0081668.1 MGP_CBAJ_G0031470.1 mouse_genomes_project 7 19673230 19701904 + MGP_CBAJ_P0081668 Nlrp9b protein_coding protein_coding MGP_CBAJ_T0010732.1 MGP_CBAJ_G0008870.1 mouse_genomes_project 7 31029779 31029862 + Mir1964 miRNA miRNA MGP_CBAJ_T0085524.1 MGP_CBAJ_G0032552.1 mouse_genomes_project 7 126773845 126789184 - MGP_CBAJ_P0085524 Psma1 protein_coding protein_coding MGP_CBAJ_T0085525.1 MGP_CBAJ_G0032552.1 mouse_genomes_project 7 126774035 126789092 - Psma1 protein_coding processed_transcript MGP_CBAJ_T0085526.1 MGP_CBAJ_G0032552.1 mouse_genomes_project 7 126781010 126789120 - Psma1 protein_coding retained_intron MGP_CBAJ_T0085527.1 MGP_CBAJ_G0032552.1 mouse_genomes_project 7 126786860 126789109 - Psma1 protein_coding retained_intron MGP_CBAJ_T0081474.1 MGP_CBAJ_G0031417.1 mouse_genomes_project 7 18480821 18483557 + MGP_CBAJ_P0081474 Irf2bp1 protein_coding protein_coding MGP_CBAJ_T0084291.1 MGP_CBAJ_G0032094.1 mouse_genomes_project 7 89224501 89284923 + MGP_CBAJ_P0084291 Alpk3 protein_coding protein_coding MGP_CBAJ_T0084292.1 MGP_CBAJ_G0032094.1 mouse_genomes_project 7 89274076 89274939 + Alpk3 protein_coding retained_intron MGP_CBAJ_T0005096.1 MGP_CBAJ_G0004335.1 mouse_genomes_project 7 30280850 30285514 - antisense antisense MGP_CBAJ_T0083926.1 MGP_CBAJ_G0032030.1 mouse_genomes_project 7 74108436 74136503 + Ttc23 protein_coding retained_intron MGP_CBAJ_T0083927.1 MGP_CBAJ_G0032030.1 mouse_genomes_project 7 74108436 74204435 + MGP_CBAJ_P0083927 Ttc23 protein_coding protein_coding MGP_CBAJ_T0083928.1 MGP_CBAJ_G0032030.1 mouse_genomes_project 7 74108451 74204437 + MGP_CBAJ_P0083928 Ttc23 protein_coding protein_coding MGP_CBAJ_T0083929.1 MGP_CBAJ_G0032030.1 mouse_genomes_project 7 74108476 74204437 + Ttc23 protein_coding processed_transcript MGP_CBAJ_T0083930.1 MGP_CBAJ_G0032030.1 mouse_genomes_project 7 74108480 74110222 + Ttc23 protein_coding processed_transcript MGP_CBAJ_T0083931.1 MGP_CBAJ_G0032030.1 mouse_genomes_project 7 74108486 74121785 + Ttc23 protein_coding processed_transcript MGP_CBAJ_T0083932.1 MGP_CBAJ_G0032030.1 mouse_genomes_project 7 74110184 74150996 + Ttc23 protein_coding processed_transcript MGP_CBAJ_T0083933.1 MGP_CBAJ_G0032030.1 mouse_genomes_project 7 74116223 74151246 + Ttc23 protein_coding processed_transcript MGP_CBAJ_T0083934.1 MGP_CBAJ_G0032030.1 mouse_genomes_project 7 74116493 74204434 + MGP_CBAJ_P0083934 Ttc23 protein_coding protein_coding MGP_CBAJ_T0083935.1 MGP_CBAJ_G0032030.1 mouse_genomes_project 7 74121977 74204003 + MGP_CBAJ_P0083935 Ttc23 protein_coding unknown_likely_coding MGP_CBAJ_T0083936.1 MGP_CBAJ_G0032030.1 mouse_genomes_project 7 74128084 74133909 + Ttc23 protein_coding processed_transcript MGP_CBAJ_T0083937.1 MGP_CBAJ_G0032030.1 mouse_genomes_project 7 74133927 74173330 + Ttc23 protein_coding processed_transcript MGP_CBAJ_T0083938.1 MGP_CBAJ_G0032030.1 mouse_genomes_project 7 74151219 74203913 + Ttc23 protein_coding processed_transcript MGP_CBAJ_T0083939.1 MGP_CBAJ_G0032030.1 mouse_genomes_project 7 74203121 74203875 + Ttc23 protein_coding processed_transcript MGP_CBAJ_T0087443.1 MGP_CBAJ_G0032958.1 mouse_genomes_project 7 160539300 160623666 - MGP_CBAJ_P0087443 Ppfia1 protein_coding protein_coding MGP_CBAJ_T0087444.1 MGP_CBAJ_G0032958.1 mouse_genomes_project 7 160539301 160552234 - Ppfia1 protein_coding retained_intron MGP_CBAJ_T0087445.1 MGP_CBAJ_G0032958.1 mouse_genomes_project 7 160539308 160577645 - MGP_CBAJ_P0087445 Ppfia1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087446.1 MGP_CBAJ_G0032958.1 mouse_genomes_project 7 160539520 160622473 - MGP_CBAJ_P0087446 Ppfia1 protein_coding protein_coding MGP_CBAJ_T0087447.1 MGP_CBAJ_G0032958.1 mouse_genomes_project 7 160545298 160549663 - Ppfia1 protein_coding processed_transcript MGP_CBAJ_T0087448.1 MGP_CBAJ_G0032958.1 mouse_genomes_project 7 160561727 160565256 - Ppfia1 protein_coding retained_intron MGP_CBAJ_T0087449.1 MGP_CBAJ_G0032958.1 mouse_genomes_project 7 160570901 160573664 - Ppfia1 protein_coding retained_intron MGP_CBAJ_T0087450.1 MGP_CBAJ_G0032958.1 mouse_genomes_project 7 160583622 160622298 - MGP_CBAJ_P0087450 Ppfia1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087451.1 MGP_CBAJ_G0032958.1 mouse_genomes_project 7 160584647 160588726 - Ppfia1 protein_coding retained_intron MGP_CBAJ_T0087064.1 MGP_CBAJ_G0032887.1 mouse_genomes_project 7 156881458 156925264 + MGP_CBAJ_P0087064 Phrf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087065.1 MGP_CBAJ_G0032887.1 mouse_genomes_project 7 156881463 156925148 + MGP_CBAJ_P0087065 Phrf1 protein_coding protein_coding MGP_CBAJ_T0087066.1 MGP_CBAJ_G0032887.1 mouse_genomes_project 7 156886700 156906228 + MGP_CBAJ_P0087066 Phrf1 protein_coding protein_coding MGP_CBAJ_T0087067.1 MGP_CBAJ_G0032887.1 mouse_genomes_project 7 156895994 156925117 + MGP_CBAJ_P0087067 Phrf1 protein_coding protein_coding MGP_CBAJ_T0087068.1 MGP_CBAJ_G0032887.1 mouse_genomes_project 7 156917435 156920591 + Phrf1 protein_coding processed_transcript MGP_CBAJ_T0087069.1 MGP_CBAJ_G0032887.1 mouse_genomes_project 7 156918524 156920351 + Phrf1 protein_coding retained_intron MGP_CBAJ_T0087070.1 MGP_CBAJ_G0032887.1 mouse_genomes_project 7 156918525 156919408 + Phrf1 protein_coding retained_intron MGP_CBAJ_T0087071.1 MGP_CBAJ_G0032887.1 mouse_genomes_project 7 156921711 156925272 + MGP_CBAJ_P0087071 Phrf1 protein_coding protein_coding MGP_CBAJ_T0087072.1 MGP_CBAJ_G0032887.1 mouse_genomes_project 7 156922179 156923109 + Phrf1 protein_coding processed_transcript MGP_CBAJ_T0087073.1 MGP_CBAJ_G0032887.1 mouse_genomes_project 7 156922918 156925269 + MGP_CBAJ_P0087073 Phrf1 protein_coding protein_coding MGP_CBAJ_T0087074.1 MGP_CBAJ_G0032887.1 mouse_genomes_project 7 156924200 156925222 + Phrf1 protein_coding processed_transcript MGP_CBAJ_T0085276.1 MGP_CBAJ_G0032454.1 mouse_genomes_project 7 118632724 118639992 - MGP_CBAJ_P0085276 Olfr710 protein_coding protein_coding MGP_CBAJ_T0082804.1 MGP_CBAJ_G0031751.1 mouse_genomes_project 7 36801878 36970284 - MGP_CBAJ_P0082804 Chst8 protein_coding protein_coding MGP_CBAJ_T0082805.1 MGP_CBAJ_G0031751.1 mouse_genomes_project 7 36801878 36970284 - MGP_CBAJ_P0082805 Chst8 protein_coding protein_coding MGP_CBAJ_T0082806.1 MGP_CBAJ_G0031751.1 mouse_genomes_project 7 36802168 36970284 - MGP_CBAJ_P0082806 Chst8 protein_coding protein_coding MGP_CBAJ_T0082807.1 MGP_CBAJ_G0031751.1 mouse_genomes_project 7 36803228 36970309 - Chst8 protein_coding processed_transcript MGP_CBAJ_T0082808.1 MGP_CBAJ_G0031751.1 mouse_genomes_project 7 36832258 36835390 - Chst8 protein_coding processed_transcript MGP_CBAJ_T0082809.1 MGP_CBAJ_G0031751.1 mouse_genomes_project 7 36833061 36970270 - Chst8 protein_coding processed_transcript MGP_CBAJ_T0015700.1 MGP_CBAJ_G0013812.1 mouse_genomes_project 7 143061696 143061980 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005144.1 MGP_CBAJ_G0004370.1 mouse_genomes_project 7 80490846 80558603 - A730056A06Rik antisense antisense MGP_CBAJ_T0005145.1 MGP_CBAJ_G0004370.1 mouse_genomes_project 7 80493088 80558612 - A730056A06Rik antisense antisense MGP_CBAJ_T0085477.1 MGP_CBAJ_G0032540.1 mouse_genomes_project 7 124644099 124692928 + MGP_CBAJ_P0085477 Micalcl protein_coding protein_coding MGP_CBAJ_T0085478.1 MGP_CBAJ_G0032540.1 mouse_genomes_project 7 124654312 124675305 + MGP_CBAJ_P0085478 Micalcl protein_coding protein_coding MGP_CBAJ_T0085479.1 MGP_CBAJ_G0032540.1 mouse_genomes_project 7 124654835 124693043 + MGP_CBAJ_P0085479 Micalcl protein_coding protein_coding MGP_CBAJ_T0085480.1 MGP_CBAJ_G0032540.1 mouse_genomes_project 7 124661108 124693043 + MGP_CBAJ_P0085480 Micalcl protein_coding protein_coding MGP_CBAJ_T0085481.1 MGP_CBAJ_G0032540.1 mouse_genomes_project 7 124687055 124692994 + Micalcl protein_coding retained_intron MGP_CBAJ_T0082135.1 MGP_CBAJ_G0031596.1 mouse_genomes_project 7 28790412 28826365 - MGP_CBAJ_P0082135 Zfp780b protein_coding protein_coding MGP_CBAJ_T0084665.1 MGP_CBAJ_G0032209.1 mouse_genomes_project 7 108958589 108973538 + MGP_CBAJ_P0084665 Prkrir protein_coding protein_coding MGP_CBAJ_T0084666.1 MGP_CBAJ_G0032209.1 mouse_genomes_project 7 108958589 108970837 + MGP_CBAJ_P0084666 Prkrir protein_coding nonsense_mediated_decay MGP_CBAJ_T0084667.1 MGP_CBAJ_G0032209.1 mouse_genomes_project 7 108958814 108970583 + MGP_CBAJ_P0084667 Prkrir protein_coding nonsense_mediated_decay MGP_CBAJ_T0084668.1 MGP_CBAJ_G0032209.1 mouse_genomes_project 7 108965345 108970727 + Prkrir protein_coding processed_transcript MGP_CBAJ_T0102073.1 MGP_CBAJ_G0040103.1 mouse_genomes_project 7 11551453 11583569 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0086638.1 MGP_CBAJ_G0032762.1 mouse_genomes_project 7 145052303 145072316 - MGP_CBAJ_P0086638 Nsmce4a protein_coding protein_coding MGP_CBAJ_T0086639.1 MGP_CBAJ_G0032762.1 mouse_genomes_project 7 145052313 145055771 - Nsmce4a protein_coding retained_intron MGP_CBAJ_T0086640.1 MGP_CBAJ_G0032762.1 mouse_genomes_project 7 145053564 145098006 - MGP_CBAJ_P0086640 Nsmce4a protein_coding protein_coding MGP_CBAJ_T0086641.1 MGP_CBAJ_G0032762.1 mouse_genomes_project 7 145055346 145059305 - Nsmce4a protein_coding retained_intron MGP_CBAJ_T0086642.1 MGP_CBAJ_G0032762.1 mouse_genomes_project 7 145056780 145070889 - MGP_CBAJ_P0086642 Nsmce4a protein_coding nonsense_mediated_decay MGP_CBAJ_T0086643.1 MGP_CBAJ_G0032762.1 mouse_genomes_project 7 145059505 145064739 - Nsmce4a protein_coding retained_intron MGP_CBAJ_T0081329.1 MGP_CBAJ_G0031366.1 mouse_genomes_project 7 15172362 15174090 - Ccdc9 protein_coding retained_intron MGP_CBAJ_T0081330.1 MGP_CBAJ_G0031366.1 mouse_genomes_project 7 15172633 15185015 - MGP_CBAJ_P0081330 Ccdc9 protein_coding protein_coding MGP_CBAJ_T0081331.1 MGP_CBAJ_G0031366.1 mouse_genomes_project 7 15173780 15183327 - MGP_CBAJ_P0081331 Ccdc9 protein_coding protein_coding MGP_CBAJ_T0081332.1 MGP_CBAJ_G0031366.1 mouse_genomes_project 7 15173793 15178980 - Ccdc9 protein_coding retained_intron MGP_CBAJ_T0081333.1 MGP_CBAJ_G0031366.1 mouse_genomes_project 7 15174188 15176705 - MGP_CBAJ_P0081333 Ccdc9 protein_coding protein_coding MGP_CBAJ_T0081334.1 MGP_CBAJ_G0031366.1 mouse_genomes_project 7 15174333 15175017 - Ccdc9 protein_coding retained_intron MGP_CBAJ_T0081335.1 MGP_CBAJ_G0031366.1 mouse_genomes_project 7 15174913 15179449 - Ccdc9 protein_coding retained_intron MGP_CBAJ_T0081336.1 MGP_CBAJ_G0031366.1 mouse_genomes_project 7 15178908 15180090 - Ccdc9 protein_coding processed_transcript MGP_CBAJ_T0081337.1 MGP_CBAJ_G0031366.1 mouse_genomes_project 7 15180773 15185048 - MGP_CBAJ_P0081337 Ccdc9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081338.1 MGP_CBAJ_G0031366.1 mouse_genomes_project 7 15180782 15183804 - MGP_CBAJ_P0081338 Ccdc9 protein_coding protein_coding MGP_CBAJ_T0081339.1 MGP_CBAJ_G0031366.1 mouse_genomes_project 7 15180833 15185042 - MGP_CBAJ_P0081339 Ccdc9 protein_coding protein_coding MGP_CBAJ_T0081340.1 MGP_CBAJ_G0031366.1 mouse_genomes_project 7 15180954 15185041 - Ccdc9 protein_coding retained_intron MGP_CBAJ_T0081341.1 MGP_CBAJ_G0031366.1 mouse_genomes_project 7 15181087 15184293 - MGP_CBAJ_P0081341 Ccdc9 protein_coding protein_coding MGP_CBAJ_T0086402.1 MGP_CBAJ_G0032722.1 mouse_genomes_project 7 141912386 141920820 + MGP_CBAJ_P0086402 Fbxl19 protein_coding protein_coding MGP_CBAJ_T0086403.1 MGP_CBAJ_G0032722.1 mouse_genomes_project 7 141913044 141941651 + MGP_CBAJ_P0086403 Fbxl19 protein_coding protein_coding MGP_CBAJ_T0086404.1 MGP_CBAJ_G0032722.1 mouse_genomes_project 7 141913613 141920823 + MGP_CBAJ_P0086404 Fbxl19 protein_coding protein_coding MGP_CBAJ_T0086405.1 MGP_CBAJ_G0032722.1 mouse_genomes_project 7 141913629 141942200 + MGP_CBAJ_P0086405 Fbxl19 protein_coding protein_coding MGP_CBAJ_T0086406.1 MGP_CBAJ_G0032722.1 mouse_genomes_project 7 141917880 141941652 + MGP_CBAJ_P0086406 Fbxl19 protein_coding protein_coding MGP_CBAJ_T0086407.1 MGP_CBAJ_G0032722.1 mouse_genomes_project 7 141919252 141941451 + MGP_CBAJ_P0086407 Fbxl19 protein_coding protein_coding MGP_CBAJ_T0086408.1 MGP_CBAJ_G0032722.1 mouse_genomes_project 7 141919379 141942207 + MGP_CBAJ_P0086408 Fbxl19 protein_coding protein_coding MGP_CBAJ_T0085340.1 MGP_CBAJ_G0032508.1 mouse_genomes_project 7 120934424 120953794 + MGP_CBAJ_P0085340 Tub protein_coding protein_coding MGP_CBAJ_T0085341.1 MGP_CBAJ_G0032508.1 mouse_genomes_project 7 120950761 120952897 + Tub protein_coding retained_intron MGP_CBAJ_T0083958.1 MGP_CBAJ_G0032039.1 mouse_genomes_project 7 80623673 80750673 - MGP_CBAJ_P0083958 Chd2 protein_coding protein_coding MGP_CBAJ_T0083959.1 MGP_CBAJ_G0032039.1 mouse_genomes_project 7 80623729 80667163 - MGP_CBAJ_P0083959 Chd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083960.1 MGP_CBAJ_G0032039.1 mouse_genomes_project 7 80627023 80645983 - MGP_CBAJ_P0083960 Chd2 protein_coding protein_coding MGP_CBAJ_T0083961.1 MGP_CBAJ_G0032039.1 mouse_genomes_project 7 80647993 80654342 - MGP_CBAJ_P0083961 Chd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083962.1 MGP_CBAJ_G0032039.1 mouse_genomes_project 7 80650562 80660488 - Chd2 protein_coding processed_transcript MGP_CBAJ_T0083963.1 MGP_CBAJ_G0032039.1 mouse_genomes_project 7 80673151 80679581 - Chd2 protein_coding processed_transcript MGP_CBAJ_T0083964.1 MGP_CBAJ_G0032039.1 mouse_genomes_project 7 80673157 80679583 - MGP_CBAJ_P0083964 Chd2 protein_coding protein_coding MGP_CBAJ_T0083965.1 MGP_CBAJ_G0032039.1 mouse_genomes_project 7 80673158 80677407 - Chd2 protein_coding retained_intron MGP_CBAJ_T0083966.1 MGP_CBAJ_G0032039.1 mouse_genomes_project 7 80698204 80702615 - MGP_CBAJ_P0083966 Chd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083967.1 MGP_CBAJ_G0032039.1 mouse_genomes_project 7 80700139 80702534 - MGP_CBAJ_P0083967 Chd2 protein_coding protein_coding MGP_CBAJ_T0083968.1 MGP_CBAJ_G0032039.1 mouse_genomes_project 7 80701477 80750672 - MGP_CBAJ_P0083968 Chd2 protein_coding protein_coding MGP_CBAJ_T0083969.1 MGP_CBAJ_G0032039.1 mouse_genomes_project 7 80702435 80704063 - Chd2 protein_coding retained_intron MGP_CBAJ_T0083970.1 MGP_CBAJ_G0032039.1 mouse_genomes_project 7 80708353 80746549 - MGP_CBAJ_P0083970 Chd2 protein_coding protein_coding MGP_CBAJ_T0083971.1 MGP_CBAJ_G0032039.1 mouse_genomes_project 7 80708383 80750663 - MGP_CBAJ_P0083971 Chd2 protein_coding protein_coding MGP_CBAJ_T0083972.1 MGP_CBAJ_G0032039.1 mouse_genomes_project 7 80747017 80750757 - Chd2 protein_coding retained_intron MGP_CBAJ_T0083973.1 MGP_CBAJ_G0032039.1 mouse_genomes_project 7 80748281 80750673 - Chd2 protein_coding processed_transcript MGP_CBAJ_T0083974.1 MGP_CBAJ_G0032039.1 mouse_genomes_project 7 80748725 80750452 - Chd2 protein_coding processed_transcript MGP_CBAJ_T0002286.1 MGP_CBAJ_G0002200.1 mouse_genomes_project 7 160845695 160847039 + TEC TEC MGP_CBAJ_T0081073.1 MGP_CBAJ_G0031258.1 mouse_genomes_project 7 3617377 3656670 + MGP_CBAJ_P0081073 Gm6792 protein_coding protein_coding MGP_CBAJ_T0081074.1 MGP_CBAJ_G0031258.1 mouse_genomes_project 7 3630447 3656877 + Gm6792 protein_coding processed_transcript MGP_CBAJ_T0081075.1 MGP_CBAJ_G0031258.1 mouse_genomes_project 7 3635360 3656670 + MGP_CBAJ_P0081075 Gm6792 protein_coding protein_coding MGP_CBAJ_T0010738.1 MGP_CBAJ_G0008876.1 mouse_genomes_project 7 37273748 37273818 + Gm25033 miRNA miRNA MGP_CBAJ_T0015665.1 MGP_CBAJ_G0013777.1 mouse_genomes_project 7 117813783 117814821 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0085802.1 MGP_CBAJ_G0032616.1 mouse_genomes_project 7 135253252 135324489 + MGP_CBAJ_P0085802 Scnn1b protein_coding protein_coding MGP_CBAJ_T0085803.1 MGP_CBAJ_G0032616.1 mouse_genomes_project 7 135253291 135324491 + MGP_CBAJ_P0085803 Scnn1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0085806.1 MGP_CBAJ_G0032616.1 mouse_genomes_project 7 135301682 135317949 + MGP_CBAJ_P0085806 Scnn1b protein_coding protein_coding MGP_CBAJ_T0005113.1 MGP_CBAJ_G0004348.1 mouse_genomes_project 7 36299136 36304972 + Gm12758 antisense antisense MGP_CBAJ_T0005114.1 MGP_CBAJ_G0004348.1 mouse_genomes_project 7 36299205 36300316 + Gm12758 antisense antisense MGP_CBAJ_T0084435.1 MGP_CBAJ_G0032154.1 mouse_genomes_project 7 95824701 95862104 + MGP_CBAJ_P0084435 protein_coding protein_coding MGP_CBAJ_T0082962.1 MGP_CBAJ_G0031784.1 mouse_genomes_project 7 44805398 44821988 + MGP_CBAJ_P0082962 Zfp788 protein_coding protein_coding MGP_CBAJ_T0082963.1 MGP_CBAJ_G0031784.1 mouse_genomes_project 7 44805726 44825318 + MGP_CBAJ_P0082963 Zfp788 protein_coding protein_coding MGP_CBAJ_T0082964.1 MGP_CBAJ_G0031784.1 mouse_genomes_project 7 44805751 44822798 + MGP_CBAJ_P0082964 Zfp788 protein_coding protein_coding MGP_CBAJ_T0082965.1 MGP_CBAJ_G0031784.1 mouse_genomes_project 7 44805753 44823437 + MGP_CBAJ_P0082965 Zfp788 protein_coding protein_coding MGP_CBAJ_T0082966.1 MGP_CBAJ_G0031784.1 mouse_genomes_project 7 44805759 44825371 + MGP_CBAJ_P0082966 Zfp788 protein_coding protein_coding MGP_CBAJ_T0082967.1 MGP_CBAJ_G0031784.1 mouse_genomes_project 7 44805772 44825967 + MGP_CBAJ_P0082967 Zfp788 protein_coding protein_coding MGP_CBAJ_T0082968.1 MGP_CBAJ_G0031784.1 mouse_genomes_project 7 44822023 44825036 + MGP_CBAJ_P0082968 Zfp788 protein_coding protein_coding MGP_CBAJ_T0085067.1 MGP_CBAJ_G0032362.1 mouse_genomes_project 7 115239004 115239949 - MGP_CBAJ_P0085067 protein_coding protein_coding MGP_CBAJ_T0002237.1 MGP_CBAJ_G0002151.1 mouse_genomes_project 7 87428933 87429971 + TEC TEC MGP_CBAJ_T0086298.1 MGP_CBAJ_G0032700.1 mouse_genomes_project 7 141312484 141316235 - MGP_CBAJ_P0086298 Dctpp1 protein_coding protein_coding MGP_CBAJ_T0083586.1 MGP_CBAJ_G0031951.1 mouse_genomes_project 7 51558769 51582788 - MGP_CBAJ_P0083586 Mrgpra6 protein_coding protein_coding MGP_CBAJ_T0083587.1 MGP_CBAJ_G0031951.1 mouse_genomes_project 7 51558779 51563346 - MGP_CBAJ_P0083587 Mrgpra6 protein_coding protein_coding MGP_CBAJ_T0083246.1 MGP_CBAJ_G0031857.1 mouse_genomes_project 7 48929173 48961440 - MGP_CBAJ_P0083246 Ap2a1 protein_coding protein_coding MGP_CBAJ_T0083247.1 MGP_CBAJ_G0031857.1 mouse_genomes_project 7 48929173 48961440 - MGP_CBAJ_P0083247 Ap2a1 protein_coding protein_coding MGP_CBAJ_T0083248.1 MGP_CBAJ_G0031857.1 mouse_genomes_project 7 48929173 48961440 - MGP_CBAJ_P0083248 Ap2a1 protein_coding protein_coding MGP_CBAJ_T0083249.1 MGP_CBAJ_G0031857.1 mouse_genomes_project 7 48929173 48961440 - MGP_CBAJ_P0083249 Ap2a1 protein_coding protein_coding MGP_CBAJ_T0005108.1 MGP_CBAJ_G0004345.1 mouse_genomes_project 7 32468233 32470169 + Gm4673 antisense antisense MGP_CBAJ_T0005109.1 MGP_CBAJ_G0004345.1 mouse_genomes_project 7 32469723 32473934 + Gm4673 antisense antisense MGP_CBAJ_T0085246.1 MGP_CBAJ_G0032433.1 mouse_genomes_project 7 117149899 117157211 - MGP_CBAJ_P0085246 Tpp1 protein_coding protein_coding MGP_CBAJ_T0084902.1 MGP_CBAJ_G0032260.1 mouse_genomes_project 7 112643868 112672135 + MGP_CBAJ_P0084902 Lamtor1 protein_coding protein_coding MGP_CBAJ_T0084903.1 MGP_CBAJ_G0032260.1 mouse_genomes_project 7 112643889 112649780 + MGP_CBAJ_P0084903 Lamtor1 protein_coding protein_coding MGP_CBAJ_T0086822.1 MGP_CBAJ_G0032810.1 mouse_genomes_project 7 152672679 152706955 + MGP_CBAJ_P0086822 Glrx3 protein_coding protein_coding MGP_CBAJ_T0086939.1 MGP_CBAJ_G0032838.1 mouse_genomes_project 7 155665908 155666984 - MGP_CBAJ_P0086939 Olfr522 protein_coding protein_coding MGP_CBAJ_T0087102.1 MGP_CBAJ_G0032894.1 mouse_genomes_project 7 157006284 157051773 + MGP_CBAJ_P0087102 Eps8l2 protein_coding protein_coding MGP_CBAJ_T0087103.1 MGP_CBAJ_G0032894.1 mouse_genomes_project 7 157006360 157051773 + Eps8l2 protein_coding retained_intron MGP_CBAJ_T0087104.1 MGP_CBAJ_G0032894.1 mouse_genomes_project 7 157006391 157041295 + Eps8l2 protein_coding processed_transcript MGP_CBAJ_T0087105.1 MGP_CBAJ_G0032894.1 mouse_genomes_project 7 157006408 157041293 + Eps8l2 protein_coding retained_intron MGP_CBAJ_T0087106.1 MGP_CBAJ_G0032894.1 mouse_genomes_project 7 157006410 157010395 + MGP_CBAJ_P0087106 Eps8l2 protein_coding protein_coding MGP_CBAJ_T0087107.1 MGP_CBAJ_G0032894.1 mouse_genomes_project 7 157010060 157041430 + Eps8l2 protein_coding retained_intron MGP_CBAJ_T0087108.1 MGP_CBAJ_G0032894.1 mouse_genomes_project 7 157045075 157050168 + Eps8l2 protein_coding retained_intron MGP_CBAJ_T0087109.1 MGP_CBAJ_G0032894.1 mouse_genomes_project 7 157045282 157050487 + Eps8l2 protein_coding processed_transcript MGP_CBAJ_T0087110.1 MGP_CBAJ_G0032894.1 mouse_genomes_project 7 157048998 157050485 + Eps8l2 protein_coding processed_transcript MGP_CBAJ_T0087111.1 MGP_CBAJ_G0032894.1 mouse_genomes_project 7 157050289 157051420 + Eps8l2 protein_coding processed_transcript MGP_CBAJ_T0081601.1 MGP_CBAJ_G0031450.1 mouse_genomes_project 7 19147628 19150996 + MGP_CBAJ_P0081601 Zfp296 protein_coding protein_coding MGP_CBAJ_T0084866.1 MGP_CBAJ_G0032255.1 mouse_genomes_project 7 112547948 112554550 - Inppl1 protein_coding processed_transcript MGP_CBAJ_T0084867.1 MGP_CBAJ_G0032255.1 mouse_genomes_project 7 112547986 112562830 - MGP_CBAJ_P0084867 Inppl1 protein_coding unknown_likely_coding MGP_CBAJ_T0084868.1 MGP_CBAJ_G0032255.1 mouse_genomes_project 7 112549232 112563101 - MGP_CBAJ_P0084868 Inppl1 protein_coding protein_coding MGP_CBAJ_T0086817.1 MGP_CBAJ_G0032809.1 mouse_genomes_project 7 152604386 152645392 - 9430038I01Rik protein_coding processed_transcript MGP_CBAJ_T0086818.1 MGP_CBAJ_G0032809.1 mouse_genomes_project 7 152604386 152645398 - MGP_CBAJ_P0086818 9430038I01Rik protein_coding protein_coding MGP_CBAJ_T0086819.1 MGP_CBAJ_G0032809.1 mouse_genomes_project 7 152604949 152645371 - MGP_CBAJ_P0086819 9430038I01Rik protein_coding protein_coding MGP_CBAJ_T0086820.1 MGP_CBAJ_G0032809.1 mouse_genomes_project 7 152614135 152645392 - 9430038I01Rik protein_coding retained_intron MGP_CBAJ_T0086821.1 MGP_CBAJ_G0032809.1 mouse_genomes_project 7 152614167 152645368 - MGP_CBAJ_P0086821 9430038I01Rik protein_coding protein_coding MGP_CBAJ_T0015565.1 MGP_CBAJ_G0013677.1 mouse_genomes_project 7 45808698 45808953 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002268.1 MGP_CBAJ_G0002182.1 mouse_genomes_project 7 140326119 140328007 + TEC TEC MGP_CBAJ_T0084916.1 MGP_CBAJ_G0032263.1 mouse_genomes_project 7 112769560 112772611 - MGP_CBAJ_P0084916 Il18bp protein_coding protein_coding MGP_CBAJ_T0002247.1 MGP_CBAJ_G0002161.1 mouse_genomes_project 7 89769787 89772004 - TEC TEC MGP_CBAJ_T0081786.1 MGP_CBAJ_G0031514.1 mouse_genomes_project 7 24924079 24929077 - MGP_CBAJ_P0081786 Lypd4 protein_coding protein_coding MGP_CBAJ_T0081787.1 MGP_CBAJ_G0031514.1 mouse_genomes_project 7 24924784 24928868 - MGP_CBAJ_P0081787 Lypd4 protein_coding protein_coding MGP_CBAJ_T0005107.1 MGP_CBAJ_G0004344.1 mouse_genomes_project 7 32467229 32470319 + Gm17077 antisense antisense MGP_CBAJ_T0081612.1 MGP_CBAJ_G0031453.1 mouse_genomes_project 7 19210585 19249562 - MGP_CBAJ_P0081612 Clptm1 protein_coding protein_coding MGP_CBAJ_T0005118.1 MGP_CBAJ_G0004352.1 mouse_genomes_project 7 37313450 37315012 - Gm45091 antisense antisense MGP_CBAJ_T0005125.1 MGP_CBAJ_G0004357.1 mouse_genomes_project 7 43796212 43880993 - antisense antisense MGP_CBAJ_T0005126.1 MGP_CBAJ_G0004357.1 mouse_genomes_project 7 43826837 43878380 - antisense antisense MGP_CBAJ_T0005127.1 MGP_CBAJ_G0004357.1 mouse_genomes_project 7 43828950 43855377 - antisense antisense MGP_CBAJ_T0005128.1 MGP_CBAJ_G0004357.1 mouse_genomes_project 7 43855559 43878658 - antisense antisense MGP_CBAJ_T0083651.1 MGP_CBAJ_G0031974.1 mouse_genomes_project 7 56595380 56644667 + MGP_CBAJ_P0083651 Slc17a6 protein_coding protein_coding MGP_CBAJ_T0084729.1 MGP_CBAJ_G0032230.1 mouse_genomes_project 7 110628140 110630156 + MGP_CBAJ_P0084729 Lipt2 protein_coding protein_coding MGP_CBAJ_T0005117.1 MGP_CBAJ_G0004351.1 mouse_genomes_project 7 37243998 37244351 + Gm45095 antisense antisense MGP_CBAJ_T0084330.1 MGP_CBAJ_G0032106.1 mouse_genomes_project 7 90067670 90105884 - MGP_CBAJ_P0084330 Btbd1 protein_coding protein_coding MGP_CBAJ_T0015555.1 MGP_CBAJ_G0013667.1 mouse_genomes_project 7 44435745 44439118 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005174.1 MGP_CBAJ_G0004390.1 mouse_genomes_project 7 106633815 106666264 - Gm15414 antisense antisense MGP_CBAJ_T0087429.1 MGP_CBAJ_G0032956.1 mouse_genomes_project 7 160004079 160483783 + MGP_CBAJ_P0087429 Shank2 protein_coding protein_coding MGP_CBAJ_T0087430.1 MGP_CBAJ_G0032956.1 mouse_genomes_project 7 160033404 160153382 + MGP_CBAJ_P0087430 Shank2 protein_coding unknown_likely_coding MGP_CBAJ_T0087431.1 MGP_CBAJ_G0032956.1 mouse_genomes_project 7 160033404 160153524 + MGP_CBAJ_P0087431 Shank2 protein_coding unknown_likely_coding MGP_CBAJ_T0087432.1 MGP_CBAJ_G0032956.1 mouse_genomes_project 7 160203469 160483783 + MGP_CBAJ_P0087432 Shank2 protein_coding protein_coding MGP_CBAJ_T0087433.1 MGP_CBAJ_G0032956.1 mouse_genomes_project 7 160315961 160481970 + MGP_CBAJ_P0087433 Shank2 protein_coding protein_coding MGP_CBAJ_T0087434.1 MGP_CBAJ_G0032956.1 mouse_genomes_project 7 160316015 160483771 + Shank2 protein_coding retained_intron MGP_CBAJ_T0087435.1 MGP_CBAJ_G0032956.1 mouse_genomes_project 7 160471285 160474124 + Shank2 protein_coding processed_transcript MGP_CBAJ_T0087019.1 MGP_CBAJ_G0032876.1 mouse_genomes_project 7 156640569 156640926 + MGP_CBAJ_P0087019 Gm17387 protein_coding protein_coding MGP_CBAJ_T0081244.1 MGP_CBAJ_G0031331.1 mouse_genomes_project 7 11594963 11605699 + MGP_CBAJ_P0081244 Cabp5 protein_coding protein_coding MGP_CBAJ_T0081245.1 MGP_CBAJ_G0031331.1 mouse_genomes_project 7 11595126 11603130 + MGP_CBAJ_P0081245 Cabp5 protein_coding protein_coding MGP_CBAJ_T0081246.1 MGP_CBAJ_G0031331.1 mouse_genomes_project 7 11595139 11602381 + MGP_CBAJ_P0081246 Cabp5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084669.1 MGP_CBAJ_G0032210.1 mouse_genomes_project 7 109102931 109116989 + MGP_CBAJ_P0084669 Wnt11 protein_coding protein_coding MGP_CBAJ_T0084670.1 MGP_CBAJ_G0032210.1 mouse_genomes_project 7 109102931 109124215 + MGP_CBAJ_P0084670 Wnt11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084671.1 MGP_CBAJ_G0032210.1 mouse_genomes_project 7 109102950 109128534 + MGP_CBAJ_P0084671 Wnt11 protein_coding protein_coding MGP_CBAJ_T0084672.1 MGP_CBAJ_G0032210.1 mouse_genomes_project 7 109106639 109124155 + MGP_CBAJ_P0084672 Wnt11 protein_coding protein_coding MGP_CBAJ_T0084673.1 MGP_CBAJ_G0032210.1 mouse_genomes_project 7 109106692 109123973 + MGP_CBAJ_P0084673 Wnt11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0018079.1 MGP_CBAJ_G0015401.1 mouse_genomes_project 7 28446231 28449417 - Gm44684 processed_transcript processed_transcript MGP_CBAJ_T0081754.1 MGP_CBAJ_G0031501.1 mouse_genomes_project 7 24476600 24485003 + MGP_CBAJ_P0081754 Zfp428 protein_coding protein_coding MGP_CBAJ_T0081755.1 MGP_CBAJ_G0031501.1 mouse_genomes_project 7 24476664 24485266 + MGP_CBAJ_P0081755 Zfp428 protein_coding protein_coding MGP_CBAJ_T0081756.1 MGP_CBAJ_G0031501.1 mouse_genomes_project 7 24476692 24484687 + MGP_CBAJ_P0081756 Zfp428 protein_coding protein_coding MGP_CBAJ_T0081757.1 MGP_CBAJ_G0031501.1 mouse_genomes_project 7 24476723 24485264 + MGP_CBAJ_P0081757 Zfp428 protein_coding protein_coding MGP_CBAJ_T0015467.1 MGP_CBAJ_G0013579.1 mouse_genomes_project 7 3193725 3193857 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0086909.1 MGP_CBAJ_G0032832.1 mouse_genomes_project 7 155578872 155585118 + MGP_CBAJ_P0086909 Prap1 protein_coding protein_coding MGP_CBAJ_T0102113.1 MGP_CBAJ_G0040142.1 mouse_genomes_project 7 35528278 35528648 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0084159.1 MGP_CBAJ_G0032076.1 mouse_genomes_project 7 88285522 88299944 + MGP_CBAJ_P0084159 Ttll13 protein_coding protein_coding MGP_CBAJ_T0084160.1 MGP_CBAJ_G0032076.1 mouse_genomes_project 7 88285571 88285951 + Ttll13 protein_coding retained_intron MGP_CBAJ_T0084161.1 MGP_CBAJ_G0032076.1 mouse_genomes_project 7 88285701 88298319 + Ttll13 protein_coding retained_intron MGP_CBAJ_T0084162.1 MGP_CBAJ_G0032076.1 mouse_genomes_project 7 88286140 88292029 + Ttll13 protein_coding retained_intron MGP_CBAJ_T0084163.1 MGP_CBAJ_G0032076.1 mouse_genomes_project 7 88286534 88299793 + MGP_CBAJ_P0084163 Ttll13 protein_coding protein_coding MGP_CBAJ_T0015537.1 MGP_CBAJ_G0013649.1 mouse_genomes_project 7 35818643 35819433 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098453.1 MGP_CBAJ_G0036715.1 mouse_genomes_project 7 86297144 86311475 - Gm44606 sense_intronic sense_intronic MGP_CBAJ_T0008931.1 MGP_CBAJ_G0007178.1 mouse_genomes_project 7 141553112 141558008 + Gm45184 lincRNA lincRNA MGP_CBAJ_T0087426.1 MGP_CBAJ_G0032955.1 mouse_genomes_project 7 159845177 159851091 + Gm498 protein_coding processed_transcript MGP_CBAJ_T0087427.1 MGP_CBAJ_G0032955.1 mouse_genomes_project 7 159847471 159880639 + MGP_CBAJ_P0087427 Gm498 protein_coding protein_coding MGP_CBAJ_T0087428.1 MGP_CBAJ_G0032955.1 mouse_genomes_project 7 159847477 159881995 + MGP_CBAJ_P0087428 Gm498 protein_coding protein_coding MGP_CBAJ_T0100732.1 MGP_CBAJ_G0038987.1 mouse_genomes_project 7 49493090 49493244 + Gm22478 snoRNA snoRNA MGP_CBAJ_T0085883.1 MGP_CBAJ_G0032631.1 mouse_genomes_project 7 136784307 136837045 + MGP_CBAJ_P0085883 Slc5a11 protein_coding protein_coding MGP_CBAJ_T0085884.1 MGP_CBAJ_G0032631.1 mouse_genomes_project 7 136784338 136798336 + Slc5a11 protein_coding processed_transcript MGP_CBAJ_T0085885.1 MGP_CBAJ_G0032631.1 mouse_genomes_project 7 136784340 136847093 + MGP_CBAJ_P0085885 Slc5a11 protein_coding protein_coding MGP_CBAJ_T0085886.1 MGP_CBAJ_G0032631.1 mouse_genomes_project 7 136798235 136808766 + MGP_CBAJ_P0085886 Slc5a11 protein_coding protein_coding MGP_CBAJ_T0085887.1 MGP_CBAJ_G0032631.1 mouse_genomes_project 7 136798235 136817348 + MGP_CBAJ_P0085887 Slc5a11 protein_coding protein_coding MGP_CBAJ_T0085888.1 MGP_CBAJ_G0032631.1 mouse_genomes_project 7 136804959 136847043 + MGP_CBAJ_P0085888 Slc5a11 protein_coding protein_coding MGP_CBAJ_T0085889.1 MGP_CBAJ_G0032631.1 mouse_genomes_project 7 136809662 136821474 + MGP_CBAJ_P0085889 Slc5a11 protein_coding protein_coding MGP_CBAJ_T0085890.1 MGP_CBAJ_G0032631.1 mouse_genomes_project 7 136836553 136839166 + Slc5a11 protein_coding processed_transcript MGP_CBAJ_T0086649.1 MGP_CBAJ_G0032764.1 mouse_genomes_project 7 145321026 145385050 + MGP_CBAJ_P0086649 Btbd16 protein_coding protein_coding MGP_CBAJ_T0100769.1 MGP_CBAJ_G0039024.1 mouse_genomes_project 7 132388150 132388276 - Gm23321 snoRNA snoRNA MGP_CBAJ_T0015663.1 MGP_CBAJ_G0013775.1 mouse_genomes_project 7 115536476 115537606 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002176.1 MGP_CBAJ_G0002091.1 mouse_genomes_project 7 39988327 39990630 - TEC TEC MGP_CBAJ_T0015575.1 MGP_CBAJ_G0013687.1 mouse_genomes_project 7 47037050 47037780 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100770.1 MGP_CBAJ_G0039025.1 mouse_genomes_project 7 134335266 134335403 - Gm27991 snoRNA snoRNA MGP_CBAJ_T0083270.1 MGP_CBAJ_G0031869.1 mouse_genomes_project 7 49141150 49150448 - MGP_CBAJ_P0083270 Rcn3 protein_coding protein_coding MGP_CBAJ_T0005115.1 MGP_CBAJ_G0004349.1 mouse_genomes_project 7 36476450 36482565 + Gm12764 antisense antisense MGP_CBAJ_T0008799.1 MGP_CBAJ_G0007094.1 mouse_genomes_project 7 77160070 77181663 - Gm28258 lincRNA lincRNA MGP_CBAJ_T0081586.1 MGP_CBAJ_G0031445.1 mouse_genomes_project 7 19051672 19054186 - MGP_CBAJ_P0081586 Bloc1s3 protein_coding protein_coding MGP_CBAJ_T0010747.1 MGP_CBAJ_G0008885.1 mouse_genomes_project 7 51448284 51448343 - Mir7056 miRNA miRNA MGP_CBAJ_T0081285.1 MGP_CBAJ_G0031354.1 mouse_genomes_project 7 14775902 14784157 - MGP_CBAJ_P0081285 Gltscr2 protein_coding protein_coding MGP_CBAJ_T0081286.1 MGP_CBAJ_G0031354.1 mouse_genomes_project 7 14775913 14783827 - Gltscr2 protein_coding retained_intron MGP_CBAJ_T0081287.1 MGP_CBAJ_G0031354.1 mouse_genomes_project 7 14780924 14784132 - Gltscr2 protein_coding processed_transcript MGP_CBAJ_T0083389.1 MGP_CBAJ_G0031900.1 mouse_genomes_project 7 49656170 49691563 + MGP_CBAJ_P0083389 Plekha4 protein_coding protein_coding MGP_CBAJ_T0083390.1 MGP_CBAJ_G0031900.1 mouse_genomes_project 7 49656170 49696186 + MGP_CBAJ_P0083390 Plekha4 protein_coding protein_coding MGP_CBAJ_T0083391.1 MGP_CBAJ_G0031900.1 mouse_genomes_project 7 49664842 49696186 + MGP_CBAJ_P0083391 Plekha4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083392.1 MGP_CBAJ_G0031900.1 mouse_genomes_project 7 49664889 49667190 + MGP_CBAJ_P0083392 Plekha4 protein_coding protein_coding MGP_CBAJ_T0083393.1 MGP_CBAJ_G0031900.1 mouse_genomes_project 7 49664954 49696186 + MGP_CBAJ_P0083393 Plekha4 protein_coding protein_coding MGP_CBAJ_T0083394.1 MGP_CBAJ_G0031900.1 mouse_genomes_project 7 49665418 49695989 + MGP_CBAJ_P0083394 Plekha4 protein_coding protein_coding MGP_CBAJ_T0083395.1 MGP_CBAJ_G0031900.1 mouse_genomes_project 7 49691828 49696186 + Plekha4 protein_coding processed_transcript MGP_CBAJ_T0083396.1 MGP_CBAJ_G0031900.1 mouse_genomes_project 7 49694646 49696186 + Plekha4 protein_coding retained_intron MGP_CBAJ_T0015479.1 MGP_CBAJ_G0013591.1 mouse_genomes_project 7 11871831 11875264 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0085404.1 MGP_CBAJ_G0032528.1 mouse_genomes_project 7 122368668 122719021 - MGP_CBAJ_P0085404 Sbf2 protein_coding protein_coding MGP_CBAJ_T0085405.1 MGP_CBAJ_G0032528.1 mouse_genomes_project 7 122368677 122719019 - MGP_CBAJ_P0085405 Sbf2 protein_coding protein_coding MGP_CBAJ_T0085406.1 MGP_CBAJ_G0032528.1 mouse_genomes_project 7 122370053 122718860 - MGP_CBAJ_P0085406 Sbf2 protein_coding protein_coding MGP_CBAJ_T0085407.1 MGP_CBAJ_G0032528.1 mouse_genomes_project 7 122381356 122400864 - Sbf2 protein_coding retained_intron MGP_CBAJ_T0085408.1 MGP_CBAJ_G0032528.1 mouse_genomes_project 7 122390548 122428270 - MGP_CBAJ_P0085408 Sbf2 protein_coding protein_coding MGP_CBAJ_T0085409.1 MGP_CBAJ_G0032528.1 mouse_genomes_project 7 122399762 122415064 - Sbf2 protein_coding retained_intron MGP_CBAJ_T0085410.1 MGP_CBAJ_G0032528.1 mouse_genomes_project 7 122401905 122432332 - MGP_CBAJ_P0085410 Sbf2 protein_coding protein_coding MGP_CBAJ_T0085411.1 MGP_CBAJ_G0032528.1 mouse_genomes_project 7 122445073 122719013 - Sbf2 protein_coding retained_intron MGP_CBAJ_T0085412.1 MGP_CBAJ_G0032528.1 mouse_genomes_project 7 122445384 122718995 - Sbf2 protein_coding retained_intron MGP_CBAJ_T0085413.1 MGP_CBAJ_G0032528.1 mouse_genomes_project 7 122496871 122520897 - MGP_CBAJ_P0085413 Sbf2 protein_coding protein_coding MGP_CBAJ_T0085414.1 MGP_CBAJ_G0032528.1 mouse_genomes_project 7 122499579 122718981 - Sbf2 protein_coding retained_intron MGP_CBAJ_T0085415.1 MGP_CBAJ_G0032528.1 mouse_genomes_project 7 122519890 122719004 - MGP_CBAJ_P0085415 Sbf2 protein_coding protein_coding MGP_CBAJ_T0085416.1 MGP_CBAJ_G0032528.1 mouse_genomes_project 7 122520077 122543037 - MGP_CBAJ_P0085416 Sbf2 protein_coding protein_coding MGP_CBAJ_T0085417.1 MGP_CBAJ_G0032528.1 mouse_genomes_project 7 122542980 122718860 - MGP_CBAJ_P0085417 Sbf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085262.1 MGP_CBAJ_G0032441.1 mouse_genomes_project 7 118400535 118401582 - MGP_CBAJ_P0085262 Olfr697 protein_coding protein_coding MGP_CBAJ_T0083243.1 MGP_CBAJ_G0031854.1 mouse_genomes_project 7 48888642 48895055 - MGP_CBAJ_P0083243 Ptov1 protein_coding unknown_likely_coding MGP_CBAJ_T0010726.1 MGP_CBAJ_G0008864.1 mouse_genomes_project 7 26055949 26056045 - Gm24865 miRNA miRNA MGP_CBAJ_T0102108.1 MGP_CBAJ_G0040137.1 mouse_genomes_project 7 32452795 32456498 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0083883.1 MGP_CBAJ_G0032024.1 mouse_genomes_project 7 73050858 73070954 + MGP_CBAJ_P0083883 Lins1 protein_coding protein_coding MGP_CBAJ_T0083884.1 MGP_CBAJ_G0032024.1 mouse_genomes_project 7 73050863 73077318 + MGP_CBAJ_P0083884 Lins1 protein_coding protein_coding MGP_CBAJ_T0083885.1 MGP_CBAJ_G0032024.1 mouse_genomes_project 7 73050869 73070818 + MGP_CBAJ_P0083885 Lins1 protein_coding protein_coding MGP_CBAJ_T0083886.1 MGP_CBAJ_G0032024.1 mouse_genomes_project 7 73050918 73072499 + Lins1 protein_coding retained_intron MGP_CBAJ_T0083887.1 MGP_CBAJ_G0032024.1 mouse_genomes_project 7 73050927 73077315 + MGP_CBAJ_P0083887 Lins1 protein_coding protein_coding MGP_CBAJ_T0083888.1 MGP_CBAJ_G0032024.1 mouse_genomes_project 7 73050927 73079827 + MGP_CBAJ_P0083888 Lins1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083889.1 MGP_CBAJ_G0032024.1 mouse_genomes_project 7 73050940 73077318 + MGP_CBAJ_P0083889 Lins1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083890.1 MGP_CBAJ_G0032024.1 mouse_genomes_project 7 73070626 73077258 + MGP_CBAJ_P0083890 Lins1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083891.1 MGP_CBAJ_G0032024.1 mouse_genomes_project 7 73070774 73072972 + MGP_CBAJ_P0083891 Lins1 protein_coding protein_coding MGP_CBAJ_T0083892.1 MGP_CBAJ_G0032024.1 mouse_genomes_project 7 73070919 73073161 + MGP_CBAJ_P0083892 Lins1 protein_coding protein_coding MGP_CBAJ_T0083893.1 MGP_CBAJ_G0032024.1 mouse_genomes_project 7 73072005 73076421 + MGP_CBAJ_P0083893 Lins1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083894.1 MGP_CBAJ_G0032024.1 mouse_genomes_project 7 73072742 73079825 + Lins1 protein_coding retained_intron MGP_CBAJ_T0087335.1 MGP_CBAJ_G0032935.1 mouse_genomes_project 7 158779021 158786281 - MGP_CBAJ_P0087335 Th protein_coding protein_coding MGP_CBAJ_T0087336.1 MGP_CBAJ_G0032935.1 mouse_genomes_project 7 158779021 158829034 - MGP_CBAJ_P0087336 Th protein_coding protein_coding MGP_CBAJ_T0087337.1 MGP_CBAJ_G0032935.1 mouse_genomes_project 7 158779235 158786228 - MGP_CBAJ_P0087337 Th protein_coding nonsense_mediated_decay MGP_CBAJ_T0087338.1 MGP_CBAJ_G0032935.1 mouse_genomes_project 7 158780671 158782876 - MGP_CBAJ_P0087338 Th protein_coding nonsense_mediated_decay MGP_CBAJ_T0087339.1 MGP_CBAJ_G0032935.1 mouse_genomes_project 7 158780699 158786233 - MGP_CBAJ_P0087339 Th protein_coding nonsense_mediated_decay MGP_CBAJ_T0087340.1 MGP_CBAJ_G0032935.1 mouse_genomes_project 7 158782864 158829026 - MGP_CBAJ_P0087340 Th protein_coding protein_coding MGP_CBAJ_T0081951.1 MGP_CBAJ_G0031548.1 mouse_genomes_project 7 25928799 25971311 - MGP_CBAJ_P0081951 Hnrnpul1 protein_coding protein_coding MGP_CBAJ_T0081952.1 MGP_CBAJ_G0031548.1 mouse_genomes_project 7 25953280 25971377 - MGP_CBAJ_P0081952 Hnrnpul1 protein_coding protein_coding MGP_CBAJ_T0081953.1 MGP_CBAJ_G0031548.1 mouse_genomes_project 7 25955967 25958263 - Hnrnpul1 protein_coding retained_intron MGP_CBAJ_T0081954.1 MGP_CBAJ_G0031548.1 mouse_genomes_project 7 25958438 25961053 - Hnrnpul1 protein_coding retained_intron MGP_CBAJ_T0084136.1 MGP_CBAJ_G0032071.1 mouse_genomes_project 7 88019133 88090188 + MGP_CBAJ_P0084136 Zfp710 protein_coding protein_coding MGP_CBAJ_T0084137.1 MGP_CBAJ_G0032071.1 mouse_genomes_project 7 88020433 88084503 + MGP_CBAJ_P0084137 Zfp710 protein_coding protein_coding MGP_CBAJ_T0084138.1 MGP_CBAJ_G0032071.1 mouse_genomes_project 7 88083871 88096098 + MGP_CBAJ_P0084138 Zfp710 protein_coding protein_coding MGP_CBAJ_T0084484.1 MGP_CBAJ_G0032171.1 mouse_genomes_project 7 99461471 99507397 - MGP_CBAJ_P0084484 Ccdc83 protein_coding protein_coding MGP_CBAJ_T0084485.1 MGP_CBAJ_G0032171.1 mouse_genomes_project 7 99474387 99507397 - MGP_CBAJ_P0084485 Ccdc83 protein_coding protein_coding MGP_CBAJ_T0084486.1 MGP_CBAJ_G0032171.1 mouse_genomes_project 7 99475747 99507397 - MGP_CBAJ_P0084486 Ccdc83 protein_coding protein_coding MGP_CBAJ_T0102062.1 MGP_CBAJ_G0040092.1 mouse_genomes_project 7 9937618 9937906 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081512.1 MGP_CBAJ_G0031425.1 mouse_genomes_project 7 18614962 18639169 + MGP_CBAJ_P0081512 Fbxo46 protein_coding protein_coding MGP_CBAJ_T0081513.1 MGP_CBAJ_G0031425.1 mouse_genomes_project 7 18628163 18636791 + MGP_CBAJ_P0081513 Fbxo46 protein_coding protein_coding MGP_CBAJ_T0084342.1 MGP_CBAJ_G0032111.1 mouse_genomes_project 7 90474438 90591261 + MGP_CBAJ_P0084342 Sh3gl3 protein_coding protein_coding MGP_CBAJ_T0084343.1 MGP_CBAJ_G0032111.1 mouse_genomes_project 7 90475085 90574762 + Sh3gl3 protein_coding retained_intron MGP_CBAJ_T0084344.1 MGP_CBAJ_G0032111.1 mouse_genomes_project 7 90475099 90614629 + MGP_CBAJ_P0084344 Sh3gl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084345.1 MGP_CBAJ_G0032111.1 mouse_genomes_project 7 90475176 90614650 + MGP_CBAJ_P0084345 Sh3gl3 protein_coding protein_coding MGP_CBAJ_T0084346.1 MGP_CBAJ_G0032111.1 mouse_genomes_project 7 90475193 90614629 + MGP_CBAJ_P0084346 Sh3gl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084347.1 MGP_CBAJ_G0032111.1 mouse_genomes_project 7 90475399 90591324 + MGP_CBAJ_P0084347 Sh3gl3 protein_coding protein_coding MGP_CBAJ_T0084348.1 MGP_CBAJ_G0032111.1 mouse_genomes_project 7 90475477 90476541 + Sh3gl3 protein_coding processed_transcript MGP_CBAJ_T0084349.1 MGP_CBAJ_G0032111.1 mouse_genomes_project 7 90575605 90614438 + MGP_CBAJ_P0084349 Sh3gl3 protein_coding protein_coding MGP_CBAJ_T0087018.1 MGP_CBAJ_G0032875.1 mouse_genomes_project 7 156627113 156628194 - MGP_CBAJ_P0087018 Ifitm6 protein_coding protein_coding MGP_CBAJ_T0083947.1 MGP_CBAJ_G0032035.1 mouse_genomes_project 7 77137448 77148722 - MGP_CBAJ_P0083947 Nr2f2 protein_coding protein_coding MGP_CBAJ_T0083948.1 MGP_CBAJ_G0032035.1 mouse_genomes_project 7 77142581 77154784 - MGP_CBAJ_P0083948 Nr2f2 protein_coding protein_coding MGP_CBAJ_T0100720.1 MGP_CBAJ_G0038975.1 mouse_genomes_project 7 29274651 29274776 + AF357399 snoRNA snoRNA MGP_CBAJ_T0015478.1 MGP_CBAJ_G0013590.1 mouse_genomes_project 7 11675557 11675879 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005179.1 MGP_CBAJ_G0004395.1 mouse_genomes_project 7 107779702 107829592 - Rsf1os2 antisense antisense MGP_CBAJ_T0005180.1 MGP_CBAJ_G0004395.1 mouse_genomes_project 7 107826470 107829670 - Rsf1os2 antisense antisense MGP_CBAJ_T0005181.1 MGP_CBAJ_G0004395.1 mouse_genomes_project 7 107828931 107829877 - Rsf1os2 antisense antisense MGP_CBAJ_T0085127.1 MGP_CBAJ_G0032395.1 mouse_genomes_project 7 115927430 115930315 - MGP_CBAJ_P0085127 protein_coding protein_coding MGP_CBAJ_T0015547.1 MGP_CBAJ_G0013659.1 mouse_genomes_project 7 41684119 41684341 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010806.1 MGP_CBAJ_G0008944.1 mouse_genomes_project 7 155252196 155252305 + Mir6401 miRNA miRNA MGP_CBAJ_T0082827.1 MGP_CBAJ_G0031756.1 mouse_genomes_project 7 37405800 37408733 - Lrp3 protein_coding processed_transcript MGP_CBAJ_T0082828.1 MGP_CBAJ_G0031756.1 mouse_genomes_project 7 37406651 37408999 - Lrp3 protein_coding retained_intron MGP_CBAJ_T0082829.1 MGP_CBAJ_G0031756.1 mouse_genomes_project 7 37406651 37421272 - MGP_CBAJ_P0082829 Lrp3 protein_coding protein_coding MGP_CBAJ_T0082830.1 MGP_CBAJ_G0031756.1 mouse_genomes_project 7 37406652 37421066 - MGP_CBAJ_P0082830 Lrp3 protein_coding protein_coding MGP_CBAJ_T0008820.1 MGP_CBAJ_G0007113.1 mouse_genomes_project 7 80906245 80906802 - lincRNA lincRNA MGP_CBAJ_T0083648.1 MGP_CBAJ_G0031972.1 mouse_genomes_project 7 55404837 55406178 + MGP_CBAJ_P0083648 4933405O20Rik protein_coding protein_coding MGP_CBAJ_T0015705.1 MGP_CBAJ_G0013817.1 mouse_genomes_project 7 154277582 154278509 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005101.1 MGP_CBAJ_G0004339.1 mouse_genomes_project 7 31923075 31930032 + Arhgap33os antisense antisense MGP_CBAJ_T0081518.1 MGP_CBAJ_G0031428.1 mouse_genomes_project 7 18661047 18670918 - MGP_CBAJ_P0081518 Gipr protein_coding protein_coding MGP_CBAJ_T0081519.1 MGP_CBAJ_G0031428.1 mouse_genomes_project 7 18661050 18670918 - Gipr protein_coding retained_intron MGP_CBAJ_T0081520.1 MGP_CBAJ_G0031428.1 mouse_genomes_project 7 18667078 18670918 - MGP_CBAJ_P0081520 Gipr protein_coding nonsense_mediated_decay MGP_CBAJ_T0081521.1 MGP_CBAJ_G0031428.1 mouse_genomes_project 7 18667245 18669881 - Gipr protein_coding retained_intron MGP_CBAJ_T0102211.1 MGP_CBAJ_G0040240.1 mouse_genomes_project 7 115357947 115358824 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085322.1 MGP_CBAJ_G0032493.1 mouse_genomes_project 7 120366809 120367868 - MGP_CBAJ_P0085322 Olfr502 protein_coding protein_coding MGP_CBAJ_T0083436.1 MGP_CBAJ_G0031914.1 mouse_genomes_project 7 49887049 49890561 + MGP_CBAJ_P0083436 Rpl18 protein_coding protein_coding MGP_CBAJ_T0083437.1 MGP_CBAJ_G0031914.1 mouse_genomes_project 7 49887135 49890554 + MGP_CBAJ_P0083437 Rpl18 protein_coding protein_coding MGP_CBAJ_T0083438.1 MGP_CBAJ_G0031914.1 mouse_genomes_project 7 49888130 49888915 + Rpl18 protein_coding retained_intron MGP_CBAJ_T0083439.1 MGP_CBAJ_G0031914.1 mouse_genomes_project 7 49888187 49889325 + MGP_CBAJ_P0083439 Rpl18 protein_coding protein_coding MGP_CBAJ_T0083440.1 MGP_CBAJ_G0031914.1 mouse_genomes_project 7 49888240 49890511 + Rpl18 protein_coding retained_intron MGP_CBAJ_T0083441.1 MGP_CBAJ_G0031914.1 mouse_genomes_project 7 49888385 49890553 + MGP_CBAJ_P0083441 Rpl18 protein_coding protein_coding MGP_CBAJ_T0083442.1 MGP_CBAJ_G0031914.1 mouse_genomes_project 7 49888410 49890556 + MGP_CBAJ_P0083442 Rpl18 protein_coding protein_coding MGP_CBAJ_T0083443.1 MGP_CBAJ_G0031914.1 mouse_genomes_project 7 49888944 49890556 + Rpl18 protein_coding retained_intron MGP_CBAJ_T0083002.1 MGP_CBAJ_G0031799.1 mouse_genomes_project 7 47092907 47095518 + MGP_CBAJ_P0083002 Cldnd2 protein_coding protein_coding MGP_CBAJ_T0083003.1 MGP_CBAJ_G0031799.1 mouse_genomes_project 7 47093701 47095483 + MGP_CBAJ_P0083003 Cldnd2 protein_coding protein_coding MGP_CBAJ_T0102204.1 MGP_CBAJ_G0040233.1 mouse_genomes_project 7 114711260 114834187 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081018.1 MGP_CBAJ_G0031232.1 mouse_genomes_project 7 2187060 2195158 - MGP_CBAJ_P0081018 Sbk2 protein_coding protein_coding MGP_CBAJ_T0081019.1 MGP_CBAJ_G0031232.1 mouse_genomes_project 7 2188004 2195161 - MGP_CBAJ_P0081019 Sbk2 protein_coding protein_coding MGP_CBAJ_T0081020.1 MGP_CBAJ_G0031232.1 mouse_genomes_project 7 2188445 2195167 - MGP_CBAJ_P0081020 Sbk2 protein_coding protein_coding MGP_CBAJ_T0081021.1 MGP_CBAJ_G0031232.1 mouse_genomes_project 7 2191900 2195203 - Sbk2 protein_coding processed_transcript MGP_CBAJ_T0085062.1 MGP_CBAJ_G0032357.1 mouse_genomes_project 7 115158232 115160460 + MGP_CBAJ_P0085062 Olfr635 protein_coding protein_coding MGP_CBAJ_T0002267.1 MGP_CBAJ_G0002181.1 mouse_genomes_project 7 139918240 139919782 - TEC TEC MGP_CBAJ_T0085116.1 MGP_CBAJ_G0032384.1 mouse_genomes_project 7 115710668 115711714 + MGP_CBAJ_P0085116 Olfr653 protein_coding protein_coding MGP_CBAJ_T0083273.1 MGP_CBAJ_G0031872.1 mouse_genomes_project 7 49186836 49191889 - MGP_CBAJ_P0083273 Rpl13a protein_coding protein_coding MGP_CBAJ_T0082916.1 MGP_CBAJ_G0031771.1 mouse_genomes_project 7 40551523 40614020 - MGP_CBAJ_P0082916 Uri1 protein_coding protein_coding MGP_CBAJ_T0082917.1 MGP_CBAJ_G0031771.1 mouse_genomes_project 7 40551524 40562080 - Uri1 protein_coding processed_transcript MGP_CBAJ_T0082918.1 MGP_CBAJ_G0031771.1 mouse_genomes_project 7 40552173 40614044 - MGP_CBAJ_P0082918 Uri1 protein_coding protein_coding MGP_CBAJ_T0082919.1 MGP_CBAJ_G0031771.1 mouse_genomes_project 7 40552832 40554060 - MGP_CBAJ_P0082919 Uri1 protein_coding protein_coding MGP_CBAJ_T0082920.1 MGP_CBAJ_G0031771.1 mouse_genomes_project 7 40552895 40618047 - MGP_CBAJ_P0082920 Uri1 protein_coding protein_coding MGP_CBAJ_T0082921.1 MGP_CBAJ_G0031771.1 mouse_genomes_project 7 40556769 40557299 - Uri1 protein_coding processed_transcript MGP_CBAJ_T0082922.1 MGP_CBAJ_G0031771.1 mouse_genomes_project 7 40562056 40614000 - MGP_CBAJ_P0082922 Uri1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0005227.1 MGP_CBAJ_G0004428.1 mouse_genomes_project 7 147766194 147770163 - Gm15718 antisense antisense MGP_CBAJ_T0085142.1 MGP_CBAJ_G0032409.1 mouse_genomes_project 7 116440715 116444440 - MGP_CBAJ_P0085142 Olfr683 protein_coding protein_coding MGP_CBAJ_T0008870.1 MGP_CBAJ_G0007142.1 mouse_genomes_project 7 108605205 108644626 - Gm44507 lincRNA lincRNA MGP_CBAJ_T0081142.1 MGP_CBAJ_G0031300.1 mouse_genomes_project 7 10436446 10437403 - MGP_CBAJ_P0081142 Vmn1r84 protein_coding protein_coding MGP_CBAJ_T0081638.1 MGP_CBAJ_G0031460.1 mouse_genomes_project 7 19359279 19378577 - MGP_CBAJ_P0081638 Bcam protein_coding protein_coding MGP_CBAJ_T0081639.1 MGP_CBAJ_G0031460.1 mouse_genomes_project 7 19359708 19360103 - Bcam protein_coding retained_intron MGP_CBAJ_T0081640.1 MGP_CBAJ_G0031460.1 mouse_genomes_project 7 19369828 19378525 - Bcam protein_coding retained_intron MGP_CBAJ_T0081641.1 MGP_CBAJ_G0031460.1 mouse_genomes_project 7 19372747 19379046 - MGP_CBAJ_P0081641 Bcam protein_coding protein_coding MGP_CBAJ_T0081642.1 MGP_CBAJ_G0031460.1 mouse_genomes_project 7 19374127 19378525 - MGP_CBAJ_P0081642 Bcam protein_coding nonsense_mediated_decay MGP_CBAJ_T0084852.1 MGP_CBAJ_G0032252.1 mouse_genomes_project 7 112069691 112181324 + MGP_CBAJ_P0084852 protein_coding protein_coding MGP_CBAJ_T0084853.1 MGP_CBAJ_G0032252.1 mouse_genomes_project 7 112069691 112181324 + MGP_CBAJ_P0084853 protein_coding protein_coding MGP_CBAJ_T0084854.1 MGP_CBAJ_G0032252.1 mouse_genomes_project 7 112069709 112181309 + MGP_CBAJ_P0084854 protein_coding protein_coding MGP_CBAJ_T0085626.1 MGP_CBAJ_G0032567.1 mouse_genomes_project 7 131034750 131182929 - MGP_CBAJ_P0085626 Smg1 protein_coding protein_coding MGP_CBAJ_T0085627.1 MGP_CBAJ_G0032567.1 mouse_genomes_project 7 131037618 131151672 - MGP_CBAJ_P0085627 Smg1 protein_coding protein_coding MGP_CBAJ_T0085628.1 MGP_CBAJ_G0032567.1 mouse_genomes_project 7 131048411 131049429 - MGP_CBAJ_P0085628 Smg1 protein_coding protein_coding MGP_CBAJ_T0085629.1 MGP_CBAJ_G0032567.1 mouse_genomes_project 7 131118087 131182929 - Smg1 protein_coding retained_intron MGP_CBAJ_T0085630.1 MGP_CBAJ_G0032567.1 mouse_genomes_project 7 131125251 131182919 - MGP_CBAJ_P0085630 Smg1 protein_coding protein_coding MGP_CBAJ_T0085631.1 MGP_CBAJ_G0032567.1 mouse_genomes_project 7 131128355 131182641 - Smg1 protein_coding retained_intron MGP_CBAJ_T0085117.1 MGP_CBAJ_G0032385.1 mouse_genomes_project 7 115718954 115719980 + MGP_CBAJ_P0085117 Olfr654 protein_coding protein_coding MGP_CBAJ_T0086695.1 MGP_CBAJ_G0032778.1 mouse_genomes_project 7 146257944 146269434 + MGP_CBAJ_P0086695 Bub3 protein_coding protein_coding MGP_CBAJ_T0082334.1 MGP_CBAJ_G0031650.1 mouse_genomes_project 7 30429419 30466632 - MGP_CBAJ_P0082334 Spint2 protein_coding protein_coding MGP_CBAJ_T0082335.1 MGP_CBAJ_G0031650.1 mouse_genomes_project 7 30429419 30466632 - MGP_CBAJ_P0082335 Spint2 protein_coding protein_coding MGP_CBAJ_T0005081.1 MGP_CBAJ_G0004323.1 mouse_genomes_project 7 19562736 19573987 + antisense antisense MGP_CBAJ_T0002166.1 MGP_CBAJ_G0002081.1 mouse_genomes_project 7 36439514 36445169 - TEC TEC MGP_CBAJ_T0083473.1 MGP_CBAJ_G0031922.1 mouse_genomes_project 7 50036124 50082038 - MGP_CBAJ_P0083473 Grin2d protein_coding protein_coding MGP_CBAJ_T0083474.1 MGP_CBAJ_G0031922.1 mouse_genomes_project 7 50081285 50085806 - MGP_CBAJ_P0083474 Grin2d protein_coding protein_coding MGP_CBAJ_T0018160.1 MGP_CBAJ_G0015432.1 mouse_genomes_project 7 140887243 140892858 + Gm20650 processed_transcript processed_transcript MGP_CBAJ_T0087238.1 MGP_CBAJ_G0032916.1 mouse_genomes_project 7 157945995 157946400 - MGP_CBAJ_P0087238 protein_coding protein_coding MGP_CBAJ_T0085259.1 MGP_CBAJ_G0032438.1 mouse_genomes_project 7 118326181 118327133 - MGP_CBAJ_P0085259 Olfr693 protein_coding protein_coding MGP_CBAJ_T0005094.1 MGP_CBAJ_G0004333.1 mouse_genomes_project 7 28219604 28224947 - Gm15541 antisense antisense MGP_CBAJ_T0085750.1 MGP_CBAJ_G0032600.1 mouse_genomes_project 7 133624200 133701296 + MGP_CBAJ_P0085750 Abca16 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085751.1 MGP_CBAJ_G0032600.1 mouse_genomes_project 7 133642997 133757725 + MGP_CBAJ_P0085751 Abca16 protein_coding protein_coding MGP_CBAJ_T0085752.1 MGP_CBAJ_G0032600.1 mouse_genomes_project 7 133642997 133757725 + MGP_CBAJ_P0085752 Abca16 protein_coding protein_coding MGP_CBAJ_T0085753.1 MGP_CBAJ_G0032600.1 mouse_genomes_project 7 133697018 133710394 + Abca16 protein_coding retained_intron MGP_CBAJ_T0086886.1 MGP_CBAJ_G0032824.1 mouse_genomes_project 7 155381161 155410095 + MGP_CBAJ_P0086886 Kndc1 protein_coding protein_coding MGP_CBAJ_T0086887.1 MGP_CBAJ_G0032824.1 mouse_genomes_project 7 155381161 155427841 + MGP_CBAJ_P0086887 Kndc1 protein_coding protein_coding MGP_CBAJ_T0086888.1 MGP_CBAJ_G0032824.1 mouse_genomes_project 7 155381304 155400831 + MGP_CBAJ_P0086888 Kndc1 protein_coding protein_coding MGP_CBAJ_T0086889.1 MGP_CBAJ_G0032824.1 mouse_genomes_project 7 155409870 155427841 + Kndc1 protein_coding retained_intron MGP_CBAJ_T0081130.1 MGP_CBAJ_G0031289.1 mouse_genomes_project 7 8557618 8559655 - MGP_CBAJ_P0081130 Vmn1r71 protein_coding protein_coding MGP_CBAJ_T0083590.1 MGP_CBAJ_G0031954.1 mouse_genomes_project 7 51689509 51690677 - MGP_CBAJ_P0083590 protein_coding protein_coding MGP_CBAJ_T0083591.1 MGP_CBAJ_G0031954.1 mouse_genomes_project 7 51689510 51957838 - MGP_CBAJ_P0083591 protein_coding protein_coding MGP_CBAJ_T0086804.1 MGP_CBAJ_G0032799.1 mouse_genomes_project 7 149633600 150190873 + MGP_CBAJ_P0086804 Dock1 protein_coding protein_coding MGP_CBAJ_T0084993.1 MGP_CBAJ_G0032291.1 mouse_genomes_project 7 113595598 113605317 + MGP_CBAJ_P0084993 Olfr558 protein_coding protein_coding MGP_CBAJ_T0084521.1 MGP_CBAJ_G0032179.1 mouse_genomes_project 7 102132160 102135732 + protein_coding processed_transcript MGP_CBAJ_T0018176.1 MGP_CBAJ_G0015442.1 mouse_genomes_project 7 157165359 157169384 - Gm10575 processed_transcript processed_transcript MGP_CBAJ_T0018177.1 MGP_CBAJ_G0015442.1 mouse_genomes_project 7 157165361 157171647 - Gm10575 processed_transcript processed_transcript MGP_CBAJ_T0018178.1 MGP_CBAJ_G0015442.1 mouse_genomes_project 7 157165798 157167775 - Gm10575 processed_transcript processed_transcript MGP_CBAJ_T0085282.1 MGP_CBAJ_G0032460.1 mouse_genomes_project 7 118804516 118805464 + MGP_CBAJ_P0085282 Olfr17 protein_coding protein_coding MGP_CBAJ_T0083256.1 MGP_CBAJ_G0031863.1 mouse_genomes_project 7 49045925 49050989 + MGP_CBAJ_P0083256 Irf3 protein_coding protein_coding MGP_CBAJ_T0083257.1 MGP_CBAJ_G0031863.1 mouse_genomes_project 7 49046225 49050533 + MGP_CBAJ_P0083257 Irf3 protein_coding protein_coding MGP_CBAJ_T0082782.1 MGP_CBAJ_G0031748.1 mouse_genomes_project 7 36320998 36321454 + MGP_CBAJ_P0082782 Gm6096 protein_coding protein_coding MGP_CBAJ_T0081487.1 MGP_CBAJ_G0031421.1 mouse_genomes_project 7 18562989 18569539 + MGP_CBAJ_P0081487 Dmwd protein_coding protein_coding MGP_CBAJ_T0081488.1 MGP_CBAJ_G0031421.1 mouse_genomes_project 7 18563020 18569539 + MGP_CBAJ_P0081488 Dmwd protein_coding protein_coding MGP_CBAJ_T0081489.1 MGP_CBAJ_G0031421.1 mouse_genomes_project 7 18564754 18569538 + Dmwd protein_coding processed_transcript MGP_CBAJ_T0081490.1 MGP_CBAJ_G0031421.1 mouse_genomes_project 7 18564787 18569265 + Dmwd protein_coding processed_transcript MGP_CBAJ_T0011578.1 MGP_CBAJ_G0009716.1 mouse_genomes_project 7 159364354 159364415 + Gm27901 misc_RNA misc_RNA MGP_CBAJ_T0086903.1 MGP_CBAJ_G0032828.1 mouse_genomes_project 7 155485241 155514267 - MGP_CBAJ_P0086903 Tubgcp2 protein_coding unknown_likely_coding MGP_CBAJ_T0085041.1 MGP_CBAJ_G0032336.1 mouse_genomes_project 7 114733803 114738296 - MGP_CBAJ_P0085041 Olfr624 protein_coding protein_coding MGP_CBAJ_T0084042.1 MGP_CBAJ_G0032052.1 mouse_genomes_project 7 86726789 86733600 + MGP_CBAJ_P0084042 Isg20 protein_coding protein_coding MGP_CBAJ_T0084043.1 MGP_CBAJ_G0032052.1 mouse_genomes_project 7 86726823 86733690 + MGP_CBAJ_P0084043 Isg20 protein_coding protein_coding MGP_CBAJ_T0084044.1 MGP_CBAJ_G0032052.1 mouse_genomes_project 7 86727130 86733771 + MGP_CBAJ_P0084044 Isg20 protein_coding protein_coding MGP_CBAJ_T0084045.1 MGP_CBAJ_G0032052.1 mouse_genomes_project 7 86727346 86730401 + Isg20 protein_coding retained_intron MGP_CBAJ_T0084046.1 MGP_CBAJ_G0032052.1 mouse_genomes_project 7 86727600 86733729 + MGP_CBAJ_P0084046 Isg20 protein_coding protein_coding MGP_CBAJ_T0084047.1 MGP_CBAJ_G0032052.1 mouse_genomes_project 7 86727694 86733570 + MGP_CBAJ_P0084047 Isg20 protein_coding protein_coding MGP_CBAJ_T0085544.1 MGP_CBAJ_G0032556.1 mouse_genomes_project 7 127263529 127270169 + MGP_CBAJ_P0085544 Calcb protein_coding protein_coding MGP_CBAJ_T0085545.1 MGP_CBAJ_G0032556.1 mouse_genomes_project 7 127263561 127269867 + MGP_CBAJ_P0085545 Calcb protein_coding protein_coding MGP_CBAJ_T0085546.1 MGP_CBAJ_G0032556.1 mouse_genomes_project 7 127264396 127265025 + MGP_CBAJ_P0085546 Calcb protein_coding protein_coding MGP_CBAJ_T0086675.1 MGP_CBAJ_G0032773.1 mouse_genomes_project 7 146086666 146097310 + MGP_CBAJ_P0086675 Pstk protein_coding protein_coding MGP_CBAJ_T0086676.1 MGP_CBAJ_G0032773.1 mouse_genomes_project 7 146086671 146097307 + MGP_CBAJ_P0086676 Pstk protein_coding nonsense_mediated_decay MGP_CBAJ_T0086677.1 MGP_CBAJ_G0032773.1 mouse_genomes_project 7 146086682 146089789 + Pstk protein_coding processed_transcript MGP_CBAJ_T0086678.1 MGP_CBAJ_G0032773.1 mouse_genomes_project 7 146088560 146097304 + Pstk protein_coding retained_intron MGP_CBAJ_T0086679.1 MGP_CBAJ_G0032773.1 mouse_genomes_project 7 146093395 146097307 + Pstk protein_coding processed_transcript MGP_CBAJ_T0086680.1 MGP_CBAJ_G0032773.1 mouse_genomes_project 7 146093727 146097198 + Pstk protein_coding retained_intron MGP_CBAJ_T0086681.1 MGP_CBAJ_G0032773.1 mouse_genomes_project 7 146093968 146097303 + Pstk protein_coding processed_transcript MGP_CBAJ_T0015699.1 MGP_CBAJ_G0013811.1 mouse_genomes_project 7 142959958 142960258 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0085034.1 MGP_CBAJ_G0032329.1 mouse_genomes_project 7 114614119 114615061 + MGP_CBAJ_P0085034 Olfr615 protein_coding protein_coding MGP_CBAJ_T0082499.1 MGP_CBAJ_G0031691.1 mouse_genomes_project 7 31855214 31857909 + MGP_CBAJ_P0082499 Nphs1 protein_coding protein_coding MGP_CBAJ_T0082500.1 MGP_CBAJ_G0031691.1 mouse_genomes_project 7 31856624 31888952 + MGP_CBAJ_P0082500 Nphs1 protein_coding protein_coding MGP_CBAJ_T0082501.1 MGP_CBAJ_G0031691.1 mouse_genomes_project 7 31871269 31884599 + Nphs1 protein_coding retained_intron MGP_CBAJ_T0082502.1 MGP_CBAJ_G0031691.1 mouse_genomes_project 7 31876931 31888610 + MGP_CBAJ_P0082502 Nphs1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082503.1 MGP_CBAJ_G0031691.1 mouse_genomes_project 7 31887983 31888717 + Nphs1 protein_coding retained_intron MGP_CBAJ_T0082980.1 MGP_CBAJ_G0031792.1 mouse_genomes_project 7 46914607 46931858 - MGP_CBAJ_P0082980 Zfp715 protein_coding protein_coding MGP_CBAJ_T0082981.1 MGP_CBAJ_G0031792.1 mouse_genomes_project 7 46914933 46931866 - MGP_CBAJ_P0082981 Zfp715 protein_coding protein_coding MGP_CBAJ_T0082982.1 MGP_CBAJ_G0031792.1 mouse_genomes_project 7 46914933 46930097 - MGP_CBAJ_P0082982 Zfp715 protein_coding protein_coding MGP_CBAJ_T0082983.1 MGP_CBAJ_G0031792.1 mouse_genomes_project 7 46914933 46931874 - MGP_CBAJ_P0082983 Zfp715 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082984.1 MGP_CBAJ_G0031792.1 mouse_genomes_project 7 46918362 46931706 - MGP_CBAJ_P0082984 Zfp715 protein_coding protein_coding MGP_CBAJ_T0082985.1 MGP_CBAJ_G0031792.1 mouse_genomes_project 7 46919886 46931905 - Zfp715 protein_coding retained_intron MGP_CBAJ_T0082986.1 MGP_CBAJ_G0031792.1 mouse_genomes_project 7 46920020 46931674 - MGP_CBAJ_P0082986 Zfp715 protein_coding protein_coding MGP_CBAJ_T0102141.1 MGP_CBAJ_G0040170.1 mouse_genomes_project 7 48113098 48114709 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085809.1 MGP_CBAJ_G0032618.1 mouse_genomes_project 7 135407044 135449521 - MGP_CBAJ_P0085809 Gga2 protein_coding protein_coding MGP_CBAJ_T0085810.1 MGP_CBAJ_G0032618.1 mouse_genomes_project 7 135407044 135449466 - MGP_CBAJ_P0085810 Gga2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085811.1 MGP_CBAJ_G0032618.1 mouse_genomes_project 7 135409087 135428249 - Gga2 protein_coding retained_intron MGP_CBAJ_T0085812.1 MGP_CBAJ_G0032618.1 mouse_genomes_project 7 135422356 135424807 - Gga2 protein_coding retained_intron MGP_CBAJ_T0085813.1 MGP_CBAJ_G0032618.1 mouse_genomes_project 7 135430504 135449479 - Gga2 protein_coding retained_intron MGP_CBAJ_T0085814.1 MGP_CBAJ_G0032618.1 mouse_genomes_project 7 135436180 135449486 - Gga2 protein_coding retained_intron MGP_CBAJ_T0084481.1 MGP_CBAJ_G0032169.1 mouse_genomes_project 7 99174983 99176070 + MGP_CBAJ_P0084481 protein_coding protein_coding MGP_CBAJ_T0002234.1 MGP_CBAJ_G0002148.1 mouse_genomes_project 7 87185029 87188024 + TEC TEC MGP_CBAJ_T0002169.1 MGP_CBAJ_G0002084.1 mouse_genomes_project 7 37512502 37513257 + TEC TEC MGP_CBAJ_T0086520.1 MGP_CBAJ_G0032745.1 mouse_genomes_project 7 142481632 142482585 - MGP_CBAJ_P0086520 Cox6a2 protein_coding protein_coding MGP_CBAJ_T0099533.1 MGP_CBAJ_G0037788.1 mouse_genomes_project 7 156820511 156820607 - Gm22019 snRNA snRNA MGP_CBAJ_T0084350.1 MGP_CBAJ_G0032112.1 mouse_genomes_project 7 90640958 90645289 + Adamtsl3 protein_coding processed_transcript MGP_CBAJ_T0084351.1 MGP_CBAJ_G0032112.1 mouse_genomes_project 7 90640996 90962685 + MGP_CBAJ_P0084351 Adamtsl3 protein_coding protein_coding MGP_CBAJ_T0084352.1 MGP_CBAJ_G0032112.1 mouse_genomes_project 7 90642482 90960673 + MGP_CBAJ_P0084352 Adamtsl3 protein_coding protein_coding MGP_CBAJ_T0084353.1 MGP_CBAJ_G0032112.1 mouse_genomes_project 7 90727049 90798251 + Adamtsl3 protein_coding retained_intron MGP_CBAJ_T0084354.1 MGP_CBAJ_G0032112.1 mouse_genomes_project 7 90960019 90961010 + MGP_CBAJ_P0084354 Adamtsl3 protein_coding protein_coding MGP_CBAJ_T0085068.1 MGP_CBAJ_G0032363.1 mouse_genomes_project 7 115248217 115249162 - MGP_CBAJ_P0085068 protein_coding protein_coding MGP_CBAJ_T0082210.1 MGP_CBAJ_G0031619.1 mouse_genomes_project 7 29473474 29475096 + MGP_CBAJ_P0082210 protein_coding protein_coding MGP_CBAJ_T0015597.1 MGP_CBAJ_G0013709.1 mouse_genomes_project 7 62554402 62555802 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015633.1 MGP_CBAJ_G0013745.1 mouse_genomes_project 7 97653586 97654566 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015471.1 MGP_CBAJ_G0013583.1 mouse_genomes_project 7 3805464 3805674 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0102171.1 MGP_CBAJ_G0040200.1 mouse_genomes_project 7 93720296 93720682 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0005215.1 MGP_CBAJ_G0004419.1 mouse_genomes_project 7 141740552 141741098 - 1700120K04Rik antisense antisense MGP_CBAJ_T0097837.1 MGP_CBAJ_G0036110.1 mouse_genomes_project 7 120002852 120008155 + pseudogene pseudogene MGP_CBAJ_T0085938.1 MGP_CBAJ_G0032642.1 mouse_genomes_project 7 139543550 139553585 + D430042O09Rik protein_coding retained_intron MGP_CBAJ_T0085939.1 MGP_CBAJ_G0032642.1 mouse_genomes_project 7 139543575 139715882 + MGP_CBAJ_P0085939 D430042O09Rik protein_coding protein_coding MGP_CBAJ_T0085940.1 MGP_CBAJ_G0032642.1 mouse_genomes_project 7 139543624 139597167 + MGP_CBAJ_P0085940 D430042O09Rik protein_coding protein_coding MGP_CBAJ_T0085941.1 MGP_CBAJ_G0032642.1 mouse_genomes_project 7 139625558 139703078 + D430042O09Rik protein_coding processed_transcript MGP_CBAJ_T0085942.1 MGP_CBAJ_G0032642.1 mouse_genomes_project 7 139670748 139715875 + D430042O09Rik protein_coding retained_intron MGP_CBAJ_T0085943.1 MGP_CBAJ_G0032642.1 mouse_genomes_project 7 139701763 139713334 + MGP_CBAJ_P0085943 D430042O09Rik protein_coding protein_coding MGP_CBAJ_T0085944.1 MGP_CBAJ_G0032642.1 mouse_genomes_project 7 139706352 139709057 + D430042O09Rik protein_coding retained_intron MGP_CBAJ_T0086249.1 MGP_CBAJ_G0032690.1 mouse_genomes_project 7 141058714 141061234 - MGP_CBAJ_P0086249 Zg16 protein_coding protein_coding MGP_CBAJ_T0086250.1 MGP_CBAJ_G0032690.1 mouse_genomes_project 7 141058714 141060536 - MGP_CBAJ_P0086250 Zg16 protein_coding protein_coding MGP_CBAJ_T0086251.1 MGP_CBAJ_G0032690.1 mouse_genomes_project 7 141059034 141108905 - MGP_CBAJ_P0086251 Zg16 protein_coding protein_coding MGP_CBAJ_T0086252.1 MGP_CBAJ_G0032690.1 mouse_genomes_project 7 141072345 141108863 - Zg16 protein_coding processed_transcript MGP_CBAJ_T0083630.1 MGP_CBAJ_G0031967.1 mouse_genomes_project 7 54360581 54365925 - MGP_CBAJ_P0083630 Dbx1 protein_coding protein_coding MGP_CBAJ_T0084455.1 MGP_CBAJ_G0032161.1 mouse_genomes_project 7 98279354 98494584 - MGP_CBAJ_P0084455 Tmem135 protein_coding protein_coding MGP_CBAJ_T0084456.1 MGP_CBAJ_G0032161.1 mouse_genomes_project 7 98281487 98293611 - Tmem135 protein_coding retained_intron MGP_CBAJ_T0084457.1 MGP_CBAJ_G0032161.1 mouse_genomes_project 7 98285692 98494557 - MGP_CBAJ_P0084457 Tmem135 protein_coding protein_coding MGP_CBAJ_T0084458.1 MGP_CBAJ_G0032161.1 mouse_genomes_project 7 98293437 98298939 - Tmem135 protein_coding processed_transcript MGP_CBAJ_T0084459.1 MGP_CBAJ_G0032161.1 mouse_genomes_project 7 98295769 98557718 - Tmem135 protein_coding processed_transcript MGP_CBAJ_T0084460.1 MGP_CBAJ_G0032161.1 mouse_genomes_project 7 98298299 98449509 - Tmem135 protein_coding processed_transcript MGP_CBAJ_T0084461.1 MGP_CBAJ_G0032161.1 mouse_genomes_project 7 98455628 98494488 - Tmem135 protein_coding retained_intron MGP_CBAJ_T0084462.1 MGP_CBAJ_G0032161.1 mouse_genomes_project 7 98456608 98494534 - MGP_CBAJ_P0084462 Tmem135 protein_coding protein_coding MGP_CBAJ_T0081826.1 MGP_CBAJ_G0031521.1 mouse_genomes_project 7 25060415 25095964 - MGP_CBAJ_P0081826 Atp1a3 protein_coding protein_coding MGP_CBAJ_T0081827.1 MGP_CBAJ_G0031521.1 mouse_genomes_project 7 25060415 25096027 - MGP_CBAJ_P0081827 Atp1a3 protein_coding protein_coding MGP_CBAJ_T0081828.1 MGP_CBAJ_G0031521.1 mouse_genomes_project 7 25060418 25096012 - MGP_CBAJ_P0081828 Atp1a3 protein_coding protein_coding MGP_CBAJ_T0081829.1 MGP_CBAJ_G0031521.1 mouse_genomes_project 7 25082672 25095976 - Atp1a3 protein_coding retained_intron MGP_CBAJ_T0081830.1 MGP_CBAJ_G0031521.1 mouse_genomes_project 7 25090613 25096026 - Atp1a3 protein_coding retained_intron MGP_CBAJ_T0100737.1 MGP_CBAJ_G0038992.1 mouse_genomes_project 7 65085419 65093184 - snoRNA snoRNA MGP_CBAJ_T0010766.1 MGP_CBAJ_G0008904.1 mouse_genomes_project 7 67779811 67779906 - Mir344 miRNA miRNA MGP_CBAJ_T0081152.1 MGP_CBAJ_G0031305.1 mouse_genomes_project 7 10672855 10689238 - MGP_CBAJ_P0081152 protein_coding protein_coding MGP_CBAJ_T0082430.1 MGP_CBAJ_G0031675.1 mouse_genomes_project 7 31602069 31610169 - MGP_CBAJ_P0082430 Tbcb protein_coding protein_coding MGP_CBAJ_T0082431.1 MGP_CBAJ_G0031675.1 mouse_genomes_project 7 31602071 31604939 - Tbcb protein_coding processed_transcript MGP_CBAJ_T0082432.1 MGP_CBAJ_G0031675.1 mouse_genomes_project 7 31602075 31605000 - Tbcb protein_coding retained_intron MGP_CBAJ_T0086910.1 MGP_CBAJ_G0032833.1 mouse_genomes_project 7 155584686 155590286 - MGP_CBAJ_P0086910 Fuom protein_coding protein_coding MGP_CBAJ_T0086911.1 MGP_CBAJ_G0032833.1 mouse_genomes_project 7 155586428 155590289 - MGP_CBAJ_P0086911 Fuom protein_coding nonsense_mediated_decay MGP_CBAJ_T0086912.1 MGP_CBAJ_G0032833.1 mouse_genomes_project 7 155587387 155590324 - MGP_CBAJ_P0086912 Fuom protein_coding protein_coding MGP_CBAJ_T0086913.1 MGP_CBAJ_G0032833.1 mouse_genomes_project 7 155587387 155590259 - MGP_CBAJ_P0086913 Fuom protein_coding protein_coding MGP_CBAJ_T0086914.1 MGP_CBAJ_G0032833.1 mouse_genomes_project 7 155587389 155587886 - Fuom protein_coding retained_intron MGP_CBAJ_T0086915.1 MGP_CBAJ_G0032833.1 mouse_genomes_project 7 155587391 155590203 - Fuom protein_coding processed_transcript MGP_CBAJ_T0086916.1 MGP_CBAJ_G0032833.1 mouse_genomes_project 7 155587411 155589161 - Fuom protein_coding retained_intron MGP_CBAJ_T0086917.1 MGP_CBAJ_G0032833.1 mouse_genomes_project 7 155587806 155590227 - MGP_CBAJ_P0086917 Fuom protein_coding protein_coding MGP_CBAJ_T0086918.1 MGP_CBAJ_G0032833.1 mouse_genomes_project 7 155588472 155590289 - MGP_CBAJ_P0086918 Fuom protein_coding protein_coding MGP_CBAJ_T0086919.1 MGP_CBAJ_G0032833.1 mouse_genomes_project 7 155589019 155590189 - Fuom protein_coding processed_transcript MGP_CBAJ_T0086920.1 MGP_CBAJ_G0032833.1 mouse_genomes_project 7 155589071 155589849 - Fuom protein_coding processed_transcript MGP_CBAJ_T0086921.1 MGP_CBAJ_G0032833.1 mouse_genomes_project 7 155589080 155590289 - Fuom protein_coding retained_intron MGP_CBAJ_T0086922.1 MGP_CBAJ_G0032833.1 mouse_genomes_project 7 155589195 155590213 - Fuom protein_coding retained_intron MGP_CBAJ_T0081015.1 MGP_CBAJ_G0031229.1 mouse_genomes_project 7 2144868 2151655 + MGP_CBAJ_P0081015 Zfp628 protein_coding protein_coding MGP_CBAJ_T0086556.1 MGP_CBAJ_G0032752.1 mouse_genomes_project 7 142695581 142754497 - MGP_CBAJ_P0086556 Rgs10 protein_coding protein_coding MGP_CBAJ_T0086557.1 MGP_CBAJ_G0032752.1 mouse_genomes_project 7 142695845 142721925 - Rgs10 protein_coding processed_transcript MGP_CBAJ_T0086558.1 MGP_CBAJ_G0032752.1 mouse_genomes_project 7 142695961 142700852 - Rgs10 protein_coding processed_transcript MGP_CBAJ_T0086559.1 MGP_CBAJ_G0032752.1 mouse_genomes_project 7 142717093 142735043 - Rgs10 protein_coding retained_intron MGP_CBAJ_T0086560.1 MGP_CBAJ_G0032752.1 mouse_genomes_project 7 142733474 142754487 - MGP_CBAJ_P0086560 Rgs10 protein_coding protein_coding MGP_CBAJ_T0086561.1 MGP_CBAJ_G0032752.1 mouse_genomes_project 7 142733745 142755082 - MGP_CBAJ_P0086561 Rgs10 protein_coding protein_coding MGP_CBAJ_T0086189.1 MGP_CBAJ_G0032678.1 mouse_genomes_project 7 140881790 140887378 - MGP_CBAJ_P0086189 Tmem219 protein_coding protein_coding MGP_CBAJ_T0086190.1 MGP_CBAJ_G0032678.1 mouse_genomes_project 7 140881837 140893046 - MGP_CBAJ_P0086190 Tmem219 protein_coding protein_coding MGP_CBAJ_T0086191.1 MGP_CBAJ_G0032678.1 mouse_genomes_project 7 140881839 140884925 - Tmem219 protein_coding retained_intron MGP_CBAJ_T0086192.1 MGP_CBAJ_G0032678.1 mouse_genomes_project 7 140881839 140920474 - MGP_CBAJ_P0086192 Tmem219 protein_coding protein_coding MGP_CBAJ_T0086193.1 MGP_CBAJ_G0032678.1 mouse_genomes_project 7 140881839 140893875 - MGP_CBAJ_P0086193 Tmem219 protein_coding protein_coding MGP_CBAJ_T0086194.1 MGP_CBAJ_G0032678.1 mouse_genomes_project 7 140881839 140893898 - MGP_CBAJ_P0086194 Tmem219 protein_coding protein_coding MGP_CBAJ_T0086195.1 MGP_CBAJ_G0032678.1 mouse_genomes_project 7 140881841 140892498 - MGP_CBAJ_P0086195 Tmem219 protein_coding protein_coding MGP_CBAJ_T0086196.1 MGP_CBAJ_G0032678.1 mouse_genomes_project 7 140884644 140920476 - MGP_CBAJ_P0086196 Tmem219 protein_coding protein_coding MGP_CBAJ_T0086197.1 MGP_CBAJ_G0032678.1 mouse_genomes_project 7 140886602 140893903 - Tmem219 protein_coding retained_intron MGP_CBAJ_T0086198.1 MGP_CBAJ_G0032678.1 mouse_genomes_project 7 140887224 140920459 - MGP_CBAJ_P0086198 Tmem219 protein_coding protein_coding MGP_CBAJ_T0081734.1 MGP_CBAJ_G0031497.1 mouse_genomes_project 7 24347433 24355882 + Smg9 protein_coding retained_intron MGP_CBAJ_T0081735.1 MGP_CBAJ_G0031497.1 mouse_genomes_project 7 24347433 24373100 + MGP_CBAJ_P0081735 Smg9 protein_coding protein_coding MGP_CBAJ_T0081736.1 MGP_CBAJ_G0031497.1 mouse_genomes_project 7 24347536 24353460 + Smg9 protein_coding retained_intron MGP_CBAJ_T0081737.1 MGP_CBAJ_G0031497.1 mouse_genomes_project 7 24347733 24355179 + MGP_CBAJ_P0081737 Smg9 protein_coding protein_coding MGP_CBAJ_T0081738.1 MGP_CBAJ_G0031497.1 mouse_genomes_project 7 24362340 24371253 + Smg9 protein_coding retained_intron MGP_CBAJ_T0081739.1 MGP_CBAJ_G0031497.1 mouse_genomes_project 7 24362582 24371253 + MGP_CBAJ_P0081739 Smg9 protein_coding protein_coding MGP_CBAJ_T0081740.1 MGP_CBAJ_G0031497.1 mouse_genomes_project 7 24370523 24372961 + Smg9 protein_coding retained_intron MGP_CBAJ_T0002273.1 MGP_CBAJ_G0002187.1 mouse_genomes_project 7 141811274 141812451 - TEC TEC MGP_CBAJ_T0008769.1 MGP_CBAJ_G0007073.1 mouse_genomes_project 7 48441082 48441961 + Gm45123 lincRNA lincRNA MGP_CBAJ_T0083177.1 MGP_CBAJ_G0031842.1 mouse_genomes_project 7 48580831 48594737 + MGP_CBAJ_P0083177 Kcnc3 protein_coding protein_coding MGP_CBAJ_T0083178.1 MGP_CBAJ_G0031842.1 mouse_genomes_project 7 48580831 48594737 + MGP_CBAJ_P0083178 Kcnc3 protein_coding protein_coding MGP_CBAJ_T0083179.1 MGP_CBAJ_G0031842.1 mouse_genomes_project 7 48581090 48594743 + MGP_CBAJ_P0083179 Kcnc3 protein_coding unknown_likely_coding MGP_CBAJ_T0083057.1 MGP_CBAJ_G0031816.1 mouse_genomes_project 7 47493535 47498029 + MGP_CBAJ_P0083057 Klk10 protein_coding protein_coding MGP_CBAJ_T0002186.1 MGP_CBAJ_G0002101.1 mouse_genomes_project 7 47414989 47415423 + TEC TEC MGP_CBAJ_T0086310.1 MGP_CBAJ_G0032705.1 mouse_genomes_project 7 141478815 141483561 - MGP_CBAJ_P0086310 protein_coding protein_coding MGP_CBAJ_T0015566.1 MGP_CBAJ_G0013678.1 mouse_genomes_project 7 45850035 45851770 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0085445.1 MGP_CBAJ_G0032534.1 mouse_genomes_project 7 123169197 123198722 + MGP_CBAJ_P0085445 Ctr9 protein_coding protein_coding MGP_CBAJ_T0085446.1 MGP_CBAJ_G0032534.1 mouse_genomes_project 7 123169241 123190009 + Ctr9 protein_coding retained_intron MGP_CBAJ_T0085447.1 MGP_CBAJ_G0032534.1 mouse_genomes_project 7 123169259 123171056 + Ctr9 protein_coding retained_intron MGP_CBAJ_T0085448.1 MGP_CBAJ_G0032534.1 mouse_genomes_project 7 123170461 123174303 + Ctr9 protein_coding processed_transcript MGP_CBAJ_T0085449.1 MGP_CBAJ_G0032534.1 mouse_genomes_project 7 123174282 123175623 + Ctr9 protein_coding retained_intron MGP_CBAJ_T0085450.1 MGP_CBAJ_G0032534.1 mouse_genomes_project 7 123188667 123189180 + Ctr9 protein_coding retained_intron MGP_CBAJ_T0085451.1 MGP_CBAJ_G0032534.1 mouse_genomes_project 7 123188667 123190329 + Ctr9 protein_coding retained_intron MGP_CBAJ_T0085452.1 MGP_CBAJ_G0032534.1 mouse_genomes_project 7 123193342 123194715 + Ctr9 protein_coding processed_transcript MGP_CBAJ_T0005070.1 MGP_CBAJ_G0004316.1 mouse_genomes_project 7 17291186 17417996 - antisense antisense MGP_CBAJ_T0005071.1 MGP_CBAJ_G0004316.1 mouse_genomes_project 7 17294532 17418040 - antisense antisense MGP_CBAJ_T0081433.1 MGP_CBAJ_G0031396.1 mouse_genomes_project 7 17283087 17288973 + MGP_CBAJ_P0081433 Ceacam12 protein_coding protein_coding MGP_CBAJ_T0081434.1 MGP_CBAJ_G0031396.1 mouse_genomes_project 7 17283097 17295169 + MGP_CBAJ_P0081434 Ceacam12 protein_coding protein_coding MGP_CBAJ_T0081435.1 MGP_CBAJ_G0031396.1 mouse_genomes_project 7 17283149 17287587 + MGP_CBAJ_P0081435 Ceacam12 protein_coding protein_coding MGP_CBAJ_T0102086.1 MGP_CBAJ_G0040116.1 mouse_genomes_project 7 13062167 13062557 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0080781.1 MGP_CBAJ_G0031186.1 mouse_genomes_project 7 640955 650565 - MGP_CBAJ_P0080781 Tfpt protein_coding protein_coding MGP_CBAJ_T0080782.1 MGP_CBAJ_G0031186.1 mouse_genomes_project 7 640955 650520 - MGP_CBAJ_P0080782 Tfpt protein_coding protein_coding MGP_CBAJ_T0080783.1 MGP_CBAJ_G0031186.1 mouse_genomes_project 7 640966 649722 - MGP_CBAJ_P0080783 Tfpt protein_coding nonsense_mediated_decay MGP_CBAJ_T0080784.1 MGP_CBAJ_G0031186.1 mouse_genomes_project 7 641410 650215 - Tfpt protein_coding processed_transcript MGP_CBAJ_T0080785.1 MGP_CBAJ_G0031186.1 mouse_genomes_project 7 641426 650463 - MGP_CBAJ_P0080785 Tfpt protein_coding protein_coding MGP_CBAJ_T0080786.1 MGP_CBAJ_G0031186.1 mouse_genomes_project 7 641605 650495 - MGP_CBAJ_P0080786 Tfpt protein_coding nonsense_mediated_decay MGP_CBAJ_T0080787.1 MGP_CBAJ_G0031186.1 mouse_genomes_project 7 645221 650215 - MGP_CBAJ_P0080787 Tfpt protein_coding nonsense_mediated_decay MGP_CBAJ_T0005132.1 MGP_CBAJ_G0004361.1 mouse_genomes_project 7 49692527 49693572 - antisense antisense MGP_CBAJ_T0082154.1 MGP_CBAJ_G0031603.1 mouse_genomes_project 7 29071216 29079022 + MGP_CBAJ_P0082154 Dyrk1b protein_coding protein_coding MGP_CBAJ_T0082155.1 MGP_CBAJ_G0031603.1 mouse_genomes_project 7 29071241 29078651 + MGP_CBAJ_P0082155 Dyrk1b protein_coding protein_coding MGP_CBAJ_T0082156.1 MGP_CBAJ_G0031603.1 mouse_genomes_project 7 29071993 29079022 + MGP_CBAJ_P0082156 Dyrk1b protein_coding protein_coding MGP_CBAJ_T0082157.1 MGP_CBAJ_G0031603.1 mouse_genomes_project 7 29072043 29078671 + MGP_CBAJ_P0082157 Dyrk1b protein_coding protein_coding MGP_CBAJ_T0100731.1 MGP_CBAJ_G0038986.1 mouse_genomes_project 7 49190525 49190608 - Snord32a snoRNA snoRNA MGP_CBAJ_T0102220.1 MGP_CBAJ_G0040249.1 mouse_genomes_project 7 117233022 117854994 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0086031.1 MGP_CBAJ_G0032657.1 mouse_genomes_project 7 140515081 140530860 - MGP_CBAJ_P0086031 Cln3 protein_coding protein_coding MGP_CBAJ_T0086032.1 MGP_CBAJ_G0032657.1 mouse_genomes_project 7 140515274 140528290 - MGP_CBAJ_P0086032 Cln3 protein_coding protein_coding MGP_CBAJ_T0086033.1 MGP_CBAJ_G0032657.1 mouse_genomes_project 7 140515274 140529323 - MGP_CBAJ_P0086033 Cln3 protein_coding protein_coding MGP_CBAJ_T0086034.1 MGP_CBAJ_G0032657.1 mouse_genomes_project 7 140515960 140528233 - MGP_CBAJ_P0086034 Cln3 protein_coding protein_coding MGP_CBAJ_T0086035.1 MGP_CBAJ_G0032657.1 mouse_genomes_project 7 140515964 140520178 - Cln3 protein_coding processed_transcript MGP_CBAJ_T0086036.1 MGP_CBAJ_G0032657.1 mouse_genomes_project 7 140515982 140516603 - Cln3 protein_coding processed_transcript MGP_CBAJ_T0086037.1 MGP_CBAJ_G0032657.1 mouse_genomes_project 7 140515996 140522918 - Cln3 protein_coding retained_intron MGP_CBAJ_T0086038.1 MGP_CBAJ_G0032657.1 mouse_genomes_project 7 140523413 140529350 - Cln3 protein_coding retained_intron MGP_CBAJ_T0086039.1 MGP_CBAJ_G0032657.1 mouse_genomes_project 7 140524265 140528269 - Cln3 protein_coding processed_transcript MGP_CBAJ_T0086040.1 MGP_CBAJ_G0032657.1 mouse_genomes_project 7 140524301 140528405 - MGP_CBAJ_P0086040 Cln3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086041.1 MGP_CBAJ_G0032657.1 mouse_genomes_project 7 140524317 140529263 - MGP_CBAJ_P0086041 Cln3 protein_coding protein_coding MGP_CBAJ_T0086042.1 MGP_CBAJ_G0032657.1 mouse_genomes_project 7 140524463 140528566 - MGP_CBAJ_P0086042 Cln3 protein_coding protein_coding MGP_CBAJ_T0086043.1 MGP_CBAJ_G0032657.1 mouse_genomes_project 7 140525312 140528157 - Cln3 protein_coding retained_intron MGP_CBAJ_T0086044.1 MGP_CBAJ_G0032657.1 mouse_genomes_project 7 140525873 140528359 - Cln3 protein_coding retained_intron MGP_CBAJ_T0086045.1 MGP_CBAJ_G0032657.1 mouse_genomes_project 7 140526555 140528385 - Cln3 protein_coding processed_transcript MGP_CBAJ_T0086046.1 MGP_CBAJ_G0032657.1 mouse_genomes_project 7 140526700 140528609 - MGP_CBAJ_P0086046 Cln3 protein_coding protein_coding MGP_CBAJ_T0086047.1 MGP_CBAJ_G0032657.1 mouse_genomes_project 7 140526703 140529621 - MGP_CBAJ_P0086047 Cln3 protein_coding protein_coding MGP_CBAJ_T0086048.1 MGP_CBAJ_G0032657.1 mouse_genomes_project 7 140526757 140528597 - MGP_CBAJ_P0086048 Cln3 protein_coding protein_coding MGP_CBAJ_T0086049.1 MGP_CBAJ_G0032657.1 mouse_genomes_project 7 140528364 140529829 - Cln3 protein_coding processed_transcript MGP_CBAJ_T0015554.1 MGP_CBAJ_G0013666.1 mouse_genomes_project 7 44435699 44439178 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0083288.1 MGP_CBAJ_G0031877.1 mouse_genomes_project 7 49244099 49249751 - MGP_CBAJ_P0083288 Gfy protein_coding protein_coding MGP_CBAJ_T0081546.1 MGP_CBAJ_G0031436.1 mouse_genomes_project 7 18877275 18889598 + MGP_CBAJ_P0081546 Ercc1 protein_coding protein_coding MGP_CBAJ_T0081547.1 MGP_CBAJ_G0031436.1 mouse_genomes_project 7 18877598 18888833 + Ercc1 protein_coding retained_intron MGP_CBAJ_T0081548.1 MGP_CBAJ_G0031436.1 mouse_genomes_project 7 18877604 18883093 + Ercc1 protein_coding retained_intron MGP_CBAJ_T0081549.1 MGP_CBAJ_G0031436.1 mouse_genomes_project 7 18877646 18888203 + MGP_CBAJ_P0081549 Ercc1 protein_coding protein_coding MGP_CBAJ_T0081550.1 MGP_CBAJ_G0031436.1 mouse_genomes_project 7 18877657 18882740 + MGP_CBAJ_P0081550 Ercc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081551.1 MGP_CBAJ_G0031436.1 mouse_genomes_project 7 18881018 18885140 + MGP_CBAJ_P0081551 Ercc1 protein_coding protein_coding MGP_CBAJ_T0081552.1 MGP_CBAJ_G0031436.1 mouse_genomes_project 7 18882029 18887689 + Ercc1 protein_coding processed_transcript MGP_CBAJ_T0081553.1 MGP_CBAJ_G0031436.1 mouse_genomes_project 7 18884602 18888540 + Ercc1 protein_coding retained_intron MGP_CBAJ_T0081554.1 MGP_CBAJ_G0031436.1 mouse_genomes_project 7 18885067 18889596 + MGP_CBAJ_P0081554 Ercc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081555.1 MGP_CBAJ_G0031436.1 mouse_genomes_project 7 18887709 18889597 + Ercc1 protein_coding retained_intron MGP_CBAJ_T0002256.1 MGP_CBAJ_G0002170.1 mouse_genomes_project 7 135543087 135545916 + TEC TEC MGP_CBAJ_T0080992.1 MGP_CBAJ_G0031221.1 mouse_genomes_project 7 1966945 1974415 - MGP_CBAJ_P0080992 Il11 protein_coding protein_coding MGP_CBAJ_T0080993.1 MGP_CBAJ_G0031221.1 mouse_genomes_project 7 1968474 1979255 - MGP_CBAJ_P0080993 Il11 protein_coding protein_coding MGP_CBAJ_T0086311.1 MGP_CBAJ_G0032706.1 mouse_genomes_project 7 141478880 141491952 - MGP_CBAJ_P0086311 protein_coding protein_coding MGP_CBAJ_T0085327.1 MGP_CBAJ_G0032498.1 mouse_genomes_project 7 120549445 120550390 + MGP_CBAJ_P0085327 Olfr510 protein_coding protein_coding MGP_CBAJ_T0005222.1 MGP_CBAJ_G0004425.1 mouse_genomes_project 7 146871044 146872175 + Gm15677 antisense antisense MGP_CBAJ_T0081264.1 MGP_CBAJ_G0031343.1 mouse_genomes_project 7 12982538 12985916 - MGP_CBAJ_P0081264 Vmn1r90 protein_coding protein_coding MGP_CBAJ_T0080838.1 MGP_CBAJ_G0031194.1 mouse_genomes_project 7 778761 826227 - MGP_CBAJ_P0080838 protein_coding protein_coding MGP_CBAJ_T0082294.1 MGP_CBAJ_G0031641.1 mouse_genomes_project 7 30277051 30297693 + MGP_CBAJ_P0082294 Rasgrp4 protein_coding protein_coding MGP_CBAJ_T0082295.1 MGP_CBAJ_G0031641.1 mouse_genomes_project 7 30277051 30297693 + MGP_CBAJ_P0082295 Rasgrp4 protein_coding protein_coding MGP_CBAJ_T0082296.1 MGP_CBAJ_G0031641.1 mouse_genomes_project 7 30277051 30297693 + MGP_CBAJ_P0082296 Rasgrp4 protein_coding protein_coding MGP_CBAJ_T0082297.1 MGP_CBAJ_G0031641.1 mouse_genomes_project 7 30277051 30297693 + MGP_CBAJ_P0082297 Rasgrp4 protein_coding protein_coding MGP_CBAJ_T0082298.1 MGP_CBAJ_G0031641.1 mouse_genomes_project 7 30277051 30297693 + MGP_CBAJ_P0082298 Rasgrp4 protein_coding protein_coding MGP_CBAJ_T0082299.1 MGP_CBAJ_G0031641.1 mouse_genomes_project 7 30277051 30297693 + MGP_CBAJ_P0082299 Rasgrp4 protein_coding protein_coding MGP_CBAJ_T0082300.1 MGP_CBAJ_G0031641.1 mouse_genomes_project 7 30277133 30294465 + Rasgrp4 protein_coding retained_intron MGP_CBAJ_T0082301.1 MGP_CBAJ_G0031641.1 mouse_genomes_project 7 30277133 30299090 + MGP_CBAJ_P0082301 Rasgrp4 protein_coding protein_coding MGP_CBAJ_T0082302.1 MGP_CBAJ_G0031641.1 mouse_genomes_project 7 30277133 30296772 + MGP_CBAJ_P0082302 Rasgrp4 protein_coding protein_coding MGP_CBAJ_T0082303.1 MGP_CBAJ_G0031641.1 mouse_genomes_project 7 30277133 30299112 + MGP_CBAJ_P0082303 Rasgrp4 protein_coding protein_coding MGP_CBAJ_T0082304.1 MGP_CBAJ_G0031641.1 mouse_genomes_project 7 30277182 30296127 + Rasgrp4 protein_coding retained_intron MGP_CBAJ_T0082305.1 MGP_CBAJ_G0031641.1 mouse_genomes_project 7 30277206 30293700 + MGP_CBAJ_P0082305 Rasgrp4 protein_coding protein_coding MGP_CBAJ_T0082306.1 MGP_CBAJ_G0031641.1 mouse_genomes_project 7 30277273 30296650 + MGP_CBAJ_P0082306 Rasgrp4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082307.1 MGP_CBAJ_G0031641.1 mouse_genomes_project 7 30295344 30296770 + MGP_CBAJ_P0082307 Rasgrp4 protein_coding protein_coding MGP_CBAJ_T0018087.1 MGP_CBAJ_G0015406.1 mouse_genomes_project 7 48148386 48168144 + Gm28496 processed_transcript processed_transcript MGP_CBAJ_T0018088.1 MGP_CBAJ_G0015406.1 mouse_genomes_project 7 48148434 48167312 + Gm28496 processed_transcript processed_transcript MGP_CBAJ_T0086358.1 MGP_CBAJ_G0032715.1 mouse_genomes_project 7 141705300 141712808 + Phkg2 protein_coding retained_intron MGP_CBAJ_T0086359.1 MGP_CBAJ_G0032715.1 mouse_genomes_project 7 141705340 141716583 + MGP_CBAJ_P0086359 Phkg2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086360.1 MGP_CBAJ_G0032715.1 mouse_genomes_project 7 141705362 141716583 + MGP_CBAJ_P0086360 Phkg2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086361.1 MGP_CBAJ_G0032715.1 mouse_genomes_project 7 141705364 141713419 + Phkg2 protein_coding retained_intron MGP_CBAJ_T0086362.1 MGP_CBAJ_G0032715.1 mouse_genomes_project 7 141705364 141717443 + MGP_CBAJ_P0086362 Phkg2 protein_coding protein_coding MGP_CBAJ_T0086363.1 MGP_CBAJ_G0032715.1 mouse_genomes_project 7 141707716 141717441 + MGP_CBAJ_P0086363 Phkg2 protein_coding protein_coding MGP_CBAJ_T0086364.1 MGP_CBAJ_G0032715.1 mouse_genomes_project 7 141707770 141717441 + MGP_CBAJ_P0086364 Phkg2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086365.1 MGP_CBAJ_G0032715.1 mouse_genomes_project 7 141707829 141716534 + Phkg2 protein_coding retained_intron MGP_CBAJ_T0086366.1 MGP_CBAJ_G0032715.1 mouse_genomes_project 7 141712161 141717436 + MGP_CBAJ_P0086366 Phkg2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086367.1 MGP_CBAJ_G0032715.1 mouse_genomes_project 7 141713422 141716555 + Phkg2 protein_coding retained_intron MGP_CBAJ_T0086368.1 MGP_CBAJ_G0032715.1 mouse_genomes_project 7 141716231 141716822 + Phkg2 protein_coding retained_intron MGP_CBAJ_T0102134.1 MGP_CBAJ_G0040163.1 mouse_genomes_project 7 47858930 48121914 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0018172.1 MGP_CBAJ_G0015440.1 mouse_genomes_project 7 155436706 155449577 + Gm16201 processed_transcript processed_transcript MGP_CBAJ_T0018173.1 MGP_CBAJ_G0015440.1 mouse_genomes_project 7 155436750 155468183 + Gm16201 processed_transcript processed_transcript MGP_CBAJ_T0018126.1 MGP_CBAJ_G0015418.1 mouse_genomes_project 7 80748130 80767286 - 1810026B05Rik processed_transcript lincRNA MGP_CBAJ_T0018127.1 MGP_CBAJ_G0015418.1 mouse_genomes_project 7 80752956 80767135 - 1810026B05Rik processed_transcript lincRNA MGP_CBAJ_T0018128.1 MGP_CBAJ_G0015418.1 mouse_genomes_project 7 80752957 80767038 - 1810026B05Rik processed_transcript lincRNA MGP_CBAJ_T0018129.1 MGP_CBAJ_G0015418.1 mouse_genomes_project 7 80752962 80755781 - 1810026B05Rik processed_transcript retained_intron MGP_CBAJ_T0018130.1 MGP_CBAJ_G0015418.1 mouse_genomes_project 7 80753163 80764811 - 1810026B05Rik processed_transcript lincRNA MGP_CBAJ_T0018131.1 MGP_CBAJ_G0015418.1 mouse_genomes_project 7 80753184 80766864 - 1810026B05Rik processed_transcript lincRNA MGP_CBAJ_T0018132.1 MGP_CBAJ_G0015418.1 mouse_genomes_project 7 80753226 80767139 - 1810026B05Rik processed_transcript lincRNA MGP_CBAJ_T0018133.1 MGP_CBAJ_G0015418.1 mouse_genomes_project 7 80764034 80767277 - 1810026B05Rik processed_transcript retained_intron MGP_CBAJ_T0002167.1 MGP_CBAJ_G0002082.1 mouse_genomes_project 7 36477517 36481398 + TEC TEC MGP_CBAJ_T0084276.1 MGP_CBAJ_G0032091.1 mouse_genomes_project 7 89029893 89032754 - MGP_CBAJ_P0084276 Nmb protein_coding protein_coding MGP_CBAJ_T0085316.1 MGP_CBAJ_G0032487.1 mouse_genomes_project 7 120149863 120150796 + MGP_CBAJ_P0085316 Olfr491 protein_coding protein_coding MGP_CBAJ_T0083771.1 MGP_CBAJ_G0032003.1 mouse_genomes_project 7 70015018 70020750 + MGP_CBAJ_P0083771 E030018B13Rik protein_coding protein_coding MGP_CBAJ_T0084332.1 MGP_CBAJ_G0032108.1 mouse_genomes_project 7 90143110 90169500 + MGP_CBAJ_P0084332 Tm6sf1 protein_coding protein_coding MGP_CBAJ_T0084333.1 MGP_CBAJ_G0032108.1 mouse_genomes_project 7 90143129 90157988 + Tm6sf1 protein_coding retained_intron MGP_CBAJ_T0084334.1 MGP_CBAJ_G0032108.1 mouse_genomes_project 7 90143227 90149510 + Tm6sf1 protein_coding processed_transcript MGP_CBAJ_T0084335.1 MGP_CBAJ_G0032108.1 mouse_genomes_project 7 90143260 90169863 + MGP_CBAJ_P0084335 Tm6sf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084336.1 MGP_CBAJ_G0032108.1 mouse_genomes_project 7 90143558 90163787 + MGP_CBAJ_P0084336 Tm6sf1 protein_coding unknown_likely_coding MGP_CBAJ_T0084337.1 MGP_CBAJ_G0032108.1 mouse_genomes_project 7 90146800 90168844 + MGP_CBAJ_P0084337 Tm6sf1 protein_coding protein_coding MGP_CBAJ_T0084338.1 MGP_CBAJ_G0032108.1 mouse_genomes_project 7 90153843 90156526 + Tm6sf1 protein_coding retained_intron MGP_CBAJ_T0084339.1 MGP_CBAJ_G0032108.1 mouse_genomes_project 7 90157603 90168832 + Tm6sf1 protein_coding retained_intron MGP_CBAJ_T0084552.1 MGP_CBAJ_G0032187.1 mouse_genomes_project 7 107395879 107421319 - MGP_CBAJ_P0084552 Usp35 protein_coding protein_coding MGP_CBAJ_T0084553.1 MGP_CBAJ_G0032187.1 mouse_genomes_project 7 107395879 107415284 - MGP_CBAJ_P0084553 Usp35 protein_coding protein_coding MGP_CBAJ_T0084554.1 MGP_CBAJ_G0032187.1 mouse_genomes_project 7 107395905 107402477 - Usp35 protein_coding processed_transcript MGP_CBAJ_T0084555.1 MGP_CBAJ_G0032187.1 mouse_genomes_project 7 107398958 107401508 - Usp35 protein_coding retained_intron MGP_CBAJ_T0084556.1 MGP_CBAJ_G0032187.1 mouse_genomes_project 7 107399073 107402478 - Usp35 protein_coding processed_transcript MGP_CBAJ_T0084557.1 MGP_CBAJ_G0032187.1 mouse_genomes_project 7 107405664 107413709 - Usp35 protein_coding retained_intron MGP_CBAJ_T0010736.1 MGP_CBAJ_G0008874.1 mouse_genomes_project 7 32014356 32014414 + Mir3569 miRNA miRNA MGP_CBAJ_T0085318.1 MGP_CBAJ_G0032489.1 mouse_genomes_project 7 120208237 120209184 + MGP_CBAJ_P0085318 protein_coding protein_coding MGP_CBAJ_T0084420.1 MGP_CBAJ_G0032141.1 mouse_genomes_project 7 95201958 95202960 - MGP_CBAJ_P0084420 Olfr304 protein_coding protein_coding MGP_CBAJ_T0084247.1 MGP_CBAJ_G0032087.1 mouse_genomes_project 7 88657973 88768434 - MGP_CBAJ_P0084247 Crtc3 protein_coding protein_coding MGP_CBAJ_T0084248.1 MGP_CBAJ_G0032087.1 mouse_genomes_project 7 88664187 88686533 - MGP_CBAJ_P0084248 Crtc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084249.1 MGP_CBAJ_G0032087.1 mouse_genomes_project 7 88667080 88672337 - Crtc3 protein_coding retained_intron MGP_CBAJ_T0084250.1 MGP_CBAJ_G0032087.1 mouse_genomes_project 7 88667142 88705990 - MGP_CBAJ_P0084250 Crtc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084251.1 MGP_CBAJ_G0032087.1 mouse_genomes_project 7 88694680 88706071 - Crtc3 protein_coding retained_intron MGP_CBAJ_T0084252.1 MGP_CBAJ_G0032087.1 mouse_genomes_project 7 88749642 88768434 - Crtc3 protein_coding retained_intron MGP_CBAJ_T0015670.1 MGP_CBAJ_G0013782.1 mouse_genomes_project 7 122616971 122617301 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002192.1 MGP_CBAJ_G0002107.1 mouse_genomes_project 7 60208919 60210457 + TEC TEC MGP_CBAJ_T0084597.1 MGP_CBAJ_G0032196.1 mouse_genomes_project 7 107829682 107857951 + MGP_CBAJ_P0084597 Clns1a protein_coding protein_coding MGP_CBAJ_T0084598.1 MGP_CBAJ_G0032196.1 mouse_genomes_project 7 107829743 107852643 + Clns1a protein_coding retained_intron MGP_CBAJ_T0084599.1 MGP_CBAJ_G0032196.1 mouse_genomes_project 7 107856879 107859871 + Clns1a protein_coding retained_intron MGP_CBAJ_T0085133.1 MGP_CBAJ_G0032400.1 mouse_genomes_project 7 116119072 116120029 - MGP_CBAJ_P0085133 Olfr668 protein_coding protein_coding MGP_CBAJ_T0087417.1 MGP_CBAJ_G0032954.1 mouse_genomes_project 7 159801080 159826736 + MGP_CBAJ_P0087417 Dhcr7 protein_coding protein_coding MGP_CBAJ_T0087418.1 MGP_CBAJ_G0032954.1 mouse_genomes_project 7 159801080 159813414 + MGP_CBAJ_P0087418 Dhcr7 protein_coding protein_coding MGP_CBAJ_T0087419.1 MGP_CBAJ_G0032954.1 mouse_genomes_project 7 159806327 159826737 + MGP_CBAJ_P0087419 Dhcr7 protein_coding protein_coding MGP_CBAJ_T0087420.1 MGP_CBAJ_G0032954.1 mouse_genomes_project 7 159806778 159826737 + MGP_CBAJ_P0087420 Dhcr7 protein_coding protein_coding MGP_CBAJ_T0087421.1 MGP_CBAJ_G0032954.1 mouse_genomes_project 7 159806935 159822304 + MGP_CBAJ_P0087421 Dhcr7 protein_coding protein_coding MGP_CBAJ_T0087422.1 MGP_CBAJ_G0032954.1 mouse_genomes_project 7 159806939 159819881 + MGP_CBAJ_P0087422 Dhcr7 protein_coding protein_coding MGP_CBAJ_T0087423.1 MGP_CBAJ_G0032954.1 mouse_genomes_project 7 159806959 159814623 + Dhcr7 protein_coding processed_transcript MGP_CBAJ_T0087424.1 MGP_CBAJ_G0032954.1 mouse_genomes_project 7 159817663 159820034 + Dhcr7 protein_coding processed_transcript MGP_CBAJ_T0087425.1 MGP_CBAJ_G0032954.1 mouse_genomes_project 7 159818068 159824144 + Dhcr7 protein_coding processed_transcript MGP_CBAJ_T0081160.1 MGP_CBAJ_G0031310.1 mouse_genomes_project 7 10962416 10978266 + MGP_CBAJ_P0081160 Zfp110 protein_coding protein_coding MGP_CBAJ_T0081161.1 MGP_CBAJ_G0031310.1 mouse_genomes_project 7 10962471 10963756 + Zfp110 protein_coding processed_transcript MGP_CBAJ_T0081162.1 MGP_CBAJ_G0031310.1 mouse_genomes_project 7 10962692 10964348 + Zfp110 protein_coding retained_intron MGP_CBAJ_T0081163.1 MGP_CBAJ_G0031310.1 mouse_genomes_project 7 10963138 10977614 + MGP_CBAJ_P0081163 Zfp110 protein_coding protein_coding MGP_CBAJ_T0081164.1 MGP_CBAJ_G0031310.1 mouse_genomes_project 7 10963952 10972594 + Zfp110 protein_coding processed_transcript MGP_CBAJ_T0099517.1 MGP_CBAJ_G0037772.1 mouse_genomes_project 7 131230906 131231011 + Gm23229 snRNA snRNA MGP_CBAJ_T0002240.1 MGP_CBAJ_G0002154.1 mouse_genomes_project 7 87527669 87529349 - TEC TEC MGP_CBAJ_T0002275.1 MGP_CBAJ_G0002189.1 mouse_genomes_project 7 141984902 141986241 - TEC TEC MGP_CBAJ_T0084173.1 MGP_CBAJ_G0032079.1 mouse_genomes_project 7 88333874 88363583 - Rccd1 protein_coding retained_intron MGP_CBAJ_T0084188.1 MGP_CBAJ_G0032079.1 mouse_genomes_project 7 88356072 88368123 - MGP_CBAJ_P0084188 Rccd1 protein_coding protein_coding MGP_CBAJ_T0084189.1 MGP_CBAJ_G0032079.1 mouse_genomes_project 7 88360178 88367824 - Rccd1 protein_coding retained_intron MGP_CBAJ_T0084190.1 MGP_CBAJ_G0032079.1 mouse_genomes_project 7 88360178 88368143 - MGP_CBAJ_P0084190 Rccd1 protein_coding protein_coding MGP_CBAJ_T0084191.1 MGP_CBAJ_G0032079.1 mouse_genomes_project 7 88360225 88368153 - Rccd1 protein_coding retained_intron MGP_CBAJ_T0084192.1 MGP_CBAJ_G0032079.1 mouse_genomes_project 7 88360227 88362689 - Rccd1 protein_coding retained_intron MGP_CBAJ_T0084193.1 MGP_CBAJ_G0032079.1 mouse_genomes_project 7 88364400 88367819 - MGP_CBAJ_P0084193 Rccd1 protein_coding protein_coding MGP_CBAJ_T0084194.1 MGP_CBAJ_G0032079.1 mouse_genomes_project 7 88364712 88367852 - Rccd1 protein_coding retained_intron MGP_CBAJ_T0084195.1 MGP_CBAJ_G0032079.1 mouse_genomes_project 7 88366107 88367833 - Rccd1 protein_coding retained_intron MGP_CBAJ_T0084196.1 MGP_CBAJ_G0032079.1 mouse_genomes_project 7 88367468 88368100 - Rccd1 protein_coding processed_transcript MGP_CBAJ_T0015492.1 MGP_CBAJ_G0013604.1 mouse_genomes_project 7 15433436 15435720 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0083245.1 MGP_CBAJ_G0031856.1 mouse_genomes_project 7 48924861 48929423 + MGP_CBAJ_P0083245 Fuz protein_coding protein_coding MGP_CBAJ_T0011567.1 MGP_CBAJ_G0009705.1 mouse_genomes_project 7 127510861 127511179 + Gm22669 misc_RNA misc_RNA MGP_CBAJ_T0005062.1 MGP_CBAJ_G0004312.1 mouse_genomes_project 7 1678085 1679736 + Gm15873 antisense antisense MGP_CBAJ_T0005063.1 MGP_CBAJ_G0004312.1 mouse_genomes_project 7 1678183 1682121 + Gm15873 antisense antisense MGP_CBAJ_T0086948.1 MGP_CBAJ_G0032845.1 mouse_genomes_project 7 155862927 155863863 - MGP_CBAJ_P0086948 Olfr60 protein_coding protein_coding MGP_CBAJ_T0085266.1 MGP_CBAJ_G0032445.1 mouse_genomes_project 7 118487773 118494318 + MGP_CBAJ_P0085266 Olfr701 protein_coding protein_coding MGP_CBAJ_T0085267.1 MGP_CBAJ_G0032445.1 mouse_genomes_project 7 118487808 118492755 + MGP_CBAJ_P0085267 Olfr701 protein_coding protein_coding MGP_CBAJ_T0081759.1 MGP_CBAJ_G0031503.1 mouse_genomes_project 7 24512672 24517061 - MGP_CBAJ_P0081759 Pinlyp protein_coding protein_coding MGP_CBAJ_T0084712.1 MGP_CBAJ_G0032223.1 mouse_genomes_project 7 110135692 110139342 + MGP_CBAJ_P0084712 Olfr521 protein_coding protein_coding MGP_CBAJ_T0010805.1 MGP_CBAJ_G0008943.1 mouse_genomes_project 7 150634537 150634658 + Mir1962 miRNA miRNA MGP_CBAJ_T0015685.1 MGP_CBAJ_G0013797.1 mouse_genomes_project 7 140052357 140052768 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0085258.1 MGP_CBAJ_G0032437.1 mouse_genomes_project 7 118225797 118234168 - MGP_CBAJ_P0085258 protein_coding protein_coding MGP_CBAJ_T0081457.1 MGP_CBAJ_G0031411.1 mouse_genomes_project 7 18302810 18327149 + Pglyrp1 protein_coding processed_transcript MGP_CBAJ_T0081458.1 MGP_CBAJ_G0031411.1 mouse_genomes_project 7 18317502 18327131 + MGP_CBAJ_P0081458 Pglyrp1 protein_coding protein_coding MGP_CBAJ_T0081459.1 MGP_CBAJ_G0031411.1 mouse_genomes_project 7 18317515 18318542 + Pglyrp1 protein_coding retained_intron MGP_CBAJ_T0084992.1 MGP_CBAJ_G0032290.1 mouse_genomes_project 7 113591483 113592540 + MGP_CBAJ_P0084992 Olfr557 protein_coding protein_coding MGP_CBAJ_T0086674.1 MGP_CBAJ_G0032772.1 mouse_genomes_project 7 146058366 146078225 - MGP_CBAJ_P0086674 2310057M21Rik protein_coding protein_coding MGP_CBAJ_T0083433.1 MGP_CBAJ_G0031913.1 mouse_genomes_project 7 49878400 49886981 - MGP_CBAJ_P0083433 Sphk2 protein_coding protein_coding MGP_CBAJ_T0083434.1 MGP_CBAJ_G0031913.1 mouse_genomes_project 7 49879200 49886881 - MGP_CBAJ_P0083434 Sphk2 protein_coding protein_coding MGP_CBAJ_T0083435.1 MGP_CBAJ_G0031913.1 mouse_genomes_project 7 49879218 49884141 - MGP_CBAJ_P0083435 Sphk2 protein_coding protein_coding MGP_CBAJ_T0081447.1 MGP_CBAJ_G0031406.1 mouse_genomes_project 7 17898305 17957928 - MGP_CBAJ_P0081447 protein_coding protein_coding MGP_CBAJ_T0015686.1 MGP_CBAJ_G0013798.1 mouse_genomes_project 7 140137255 140137503 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008935.1 MGP_CBAJ_G0007181.1 mouse_genomes_project 7 142834467 142848175 - Gm45018 lincRNA lincRNA MGP_CBAJ_T0083244.1 MGP_CBAJ_G0031855.1 mouse_genomes_project 7 48908353 48921179 - MGP_CBAJ_P0083244 Med25 protein_coding protein_coding MGP_CBAJ_T0085301.1 MGP_CBAJ_G0032472.1 mouse_genomes_project 7 119563335 119564262 + MGP_CBAJ_P0085301 Olfr467 protein_coding protein_coding MGP_CBAJ_T0082347.1 MGP_CBAJ_G0031653.1 mouse_genomes_project 7 30514093 30582321 - MGP_CBAJ_P0082347 Sipa1l3 protein_coding protein_coding MGP_CBAJ_T0082348.1 MGP_CBAJ_G0031653.1 mouse_genomes_project 7 30514099 30553642 - Sipa1l3 protein_coding retained_intron MGP_CBAJ_T0082349.1 MGP_CBAJ_G0031653.1 mouse_genomes_project 7 30514099 30717004 - MGP_CBAJ_P0082349 Sipa1l3 protein_coding protein_coding MGP_CBAJ_T0082350.1 MGP_CBAJ_G0031653.1 mouse_genomes_project 7 30514099 30717004 - MGP_CBAJ_P0082350 Sipa1l3 protein_coding protein_coding MGP_CBAJ_T0082351.1 MGP_CBAJ_G0031653.1 mouse_genomes_project 7 30517660 30553564 - Sipa1l3 protein_coding retained_intron MGP_CBAJ_T0082352.1 MGP_CBAJ_G0031653.1 mouse_genomes_project 7 30518153 30525278 - MGP_CBAJ_P0082352 Sipa1l3 protein_coding protein_coding MGP_CBAJ_T0082353.1 MGP_CBAJ_G0031653.1 mouse_genomes_project 7 30518448 30569115 - MGP_CBAJ_P0082353 Sipa1l3 protein_coding protein_coding MGP_CBAJ_T0082354.1 MGP_CBAJ_G0031653.1 mouse_genomes_project 7 30519749 30540847 - Sipa1l3 protein_coding retained_intron MGP_CBAJ_T0082355.1 MGP_CBAJ_G0031653.1 mouse_genomes_project 7 30527393 30538041 - Sipa1l3 protein_coding retained_intron MGP_CBAJ_T0082356.1 MGP_CBAJ_G0031653.1 mouse_genomes_project 7 30566880 30568588 - Sipa1l3 protein_coding retained_intron MGP_CBAJ_T0082357.1 MGP_CBAJ_G0031653.1 mouse_genomes_project 7 30568000 30569123 - MGP_CBAJ_P0082357 Sipa1l3 protein_coding protein_coding MGP_CBAJ_T0082358.1 MGP_CBAJ_G0031653.1 mouse_genomes_project 7 30575503 30582461 - Sipa1l3 protein_coding retained_intron MGP_CBAJ_T0082359.1 MGP_CBAJ_G0031653.1 mouse_genomes_project 7 30588971 30716996 - Sipa1l3 protein_coding processed_transcript MGP_CBAJ_T0082360.1 MGP_CBAJ_G0031653.1 mouse_genomes_project 7 30606508 30736075 - MGP_CBAJ_P0082360 Sipa1l3 protein_coding protein_coding MGP_CBAJ_T0082361.1 MGP_CBAJ_G0031653.1 mouse_genomes_project 7 30606613 30736104 - Sipa1l3 protein_coding processed_transcript MGP_CBAJ_T0082362.1 MGP_CBAJ_G0031653.1 mouse_genomes_project 7 30606686 30736078 - Sipa1l3 protein_coding processed_transcript MGP_CBAJ_T0082363.1 MGP_CBAJ_G0031653.1 mouse_genomes_project 7 30703030 30736023 - Sipa1l3 protein_coding processed_transcript MGP_CBAJ_T0082364.1 MGP_CBAJ_G0031653.1 mouse_genomes_project 7 30734233 30736018 - Sipa1l3 protein_coding processed_transcript MGP_CBAJ_T0086536.1 MGP_CBAJ_G0032750.1 mouse_genomes_project 7 142556707 142557768 + Slc5a2 protein_coding retained_intron MGP_CBAJ_T0086537.1 MGP_CBAJ_G0032750.1 mouse_genomes_project 7 142556726 142566683 + MGP_CBAJ_P0086537 Slc5a2 protein_coding protein_coding MGP_CBAJ_T0086538.1 MGP_CBAJ_G0032750.1 mouse_genomes_project 7 142556728 142566473 + MGP_CBAJ_P0086538 Slc5a2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086539.1 MGP_CBAJ_G0032750.1 mouse_genomes_project 7 142556733 142560190 + MGP_CBAJ_P0086539 Slc5a2 protein_coding protein_coding MGP_CBAJ_T0086540.1 MGP_CBAJ_G0032750.1 mouse_genomes_project 7 142556745 142560194 + MGP_CBAJ_P0086540 Slc5a2 protein_coding protein_coding MGP_CBAJ_T0086541.1 MGP_CBAJ_G0032750.1 mouse_genomes_project 7 142557350 142564317 + MGP_CBAJ_P0086541 Slc5a2 protein_coding protein_coding MGP_CBAJ_T0086542.1 MGP_CBAJ_G0032750.1 mouse_genomes_project 7 142557393 142558529 + MGP_CBAJ_P0086542 Slc5a2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086543.1 MGP_CBAJ_G0032750.1 mouse_genomes_project 7 142557420 142557825 + Slc5a2 protein_coding retained_intron MGP_CBAJ_T0086544.1 MGP_CBAJ_G0032750.1 mouse_genomes_project 7 142558008 142560043 + Slc5a2 protein_coding retained_intron MGP_CBAJ_T0086545.1 MGP_CBAJ_G0032750.1 mouse_genomes_project 7 142558441 142564240 + MGP_CBAJ_P0086545 Slc5a2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086546.1 MGP_CBAJ_G0032750.1 mouse_genomes_project 7 142560003 142566440 + MGP_CBAJ_P0086546 Slc5a2 protein_coding protein_coding MGP_CBAJ_T0086547.1 MGP_CBAJ_G0032750.1 mouse_genomes_project 7 142564826 142566440 + MGP_CBAJ_P0086547 Slc5a2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0102060.1 MGP_CBAJ_G0040090.1 mouse_genomes_project 7 9820052 9820444 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0084074.1 MGP_CBAJ_G0032058.1 mouse_genomes_project 7 87297966 87310388 + MGP_CBAJ_P0084074 Fanci protein_coding protein_coding MGP_CBAJ_T0084075.1 MGP_CBAJ_G0032058.1 mouse_genomes_project 7 87298327 87321401 + MGP_CBAJ_P0084075 Fanci protein_coding protein_coding MGP_CBAJ_T0084076.1 MGP_CBAJ_G0032058.1 mouse_genomes_project 7 87298331 87365069 + MGP_CBAJ_P0084076 Fanci protein_coding protein_coding MGP_CBAJ_T0084077.1 MGP_CBAJ_G0032058.1 mouse_genomes_project 7 87298372 87365069 + MGP_CBAJ_P0084077 Fanci protein_coding nonsense_mediated_decay MGP_CBAJ_T0084078.1 MGP_CBAJ_G0032058.1 mouse_genomes_project 7 87307639 87347350 + MGP_CBAJ_P0084078 Fanci protein_coding protein_coding MGP_CBAJ_T0084079.1 MGP_CBAJ_G0032058.1 mouse_genomes_project 7 87324311 87338870 + MGP_CBAJ_P0084079 Fanci protein_coding nonsense_mediated_decay MGP_CBAJ_T0084080.1 MGP_CBAJ_G0032058.1 mouse_genomes_project 7 87355507 87360530 + MGP_CBAJ_P0084080 Fanci protein_coding nonsense_mediated_decay MGP_CBAJ_T0008905.1 MGP_CBAJ_G0007163.1 mouse_genomes_project 7 134956546 134958235 + 1700025J12Rik lincRNA lincRNA MGP_CBAJ_T0080962.1 MGP_CBAJ_G0031216.1 mouse_genomes_project 7 1864659 1898158 + MGP_CBAJ_P0080962 Brsk1 protein_coding protein_coding MGP_CBAJ_T0080963.1 MGP_CBAJ_G0031216.1 mouse_genomes_project 7 1864983 1898174 + MGP_CBAJ_P0080963 Brsk1 protein_coding protein_coding MGP_CBAJ_T0080964.1 MGP_CBAJ_G0031216.1 mouse_genomes_project 7 1865135 1885670 + MGP_CBAJ_P0080964 Brsk1 protein_coding protein_coding MGP_CBAJ_T0080965.1 MGP_CBAJ_G0031216.1 mouse_genomes_project 7 1866289 1885670 + MGP_CBAJ_P0080965 Brsk1 protein_coding protein_coding MGP_CBAJ_T0080967.1 MGP_CBAJ_G0031216.1 mouse_genomes_project 7 1889229 1891192 + MGP_CBAJ_P0080967 Brsk1 protein_coding protein_coding MGP_CBAJ_T0008900.1 MGP_CBAJ_G0007159.1 mouse_genomes_project 7 129255520 129260762 + lincRNA lincRNA MGP_CBAJ_T0082679.1 MGP_CBAJ_G0031726.1 mouse_genomes_project 7 32569844 32578740 - MGP_CBAJ_P0082679 Fxyd7 protein_coding protein_coding MGP_CBAJ_T0082680.1 MGP_CBAJ_G0031726.1 mouse_genomes_project 7 32569844 32578804 - MGP_CBAJ_P0082680 Fxyd7 protein_coding protein_coding MGP_CBAJ_T0083759.1 MGP_CBAJ_G0031997.1 mouse_genomes_project 7 68351512 68356174 + MGP_CBAJ_P0083759 Magel2 protein_coding protein_coding MGP_CBAJ_T0100724.1 MGP_CBAJ_G0038979.1 mouse_genomes_project 7 48151512 48151602 + Snord88c snoRNA snoRNA MGP_CBAJ_T0086418.1 MGP_CBAJ_G0032725.1 mouse_genomes_project 7 141958329 141976551 + MGP_CBAJ_P0086418 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086419.1 MGP_CBAJ_G0032725.1 mouse_genomes_project 7 141972107 141974771 + MGP_CBAJ_P0086419 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081684.1 MGP_CBAJ_G0031484.1 mouse_genomes_project 7 23956328 23987203 + MGP_CBAJ_P0081684 Zfp180 protein_coding protein_coding MGP_CBAJ_T0081685.1 MGP_CBAJ_G0031484.1 mouse_genomes_project 7 23956351 23984053 + MGP_CBAJ_P0081685 Zfp180 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081686.1 MGP_CBAJ_G0031484.1 mouse_genomes_project 7 23956614 23987196 + MGP_CBAJ_P0081686 Zfp180 protein_coding protein_coding MGP_CBAJ_T0081687.1 MGP_CBAJ_G0031484.1 mouse_genomes_project 7 23976650 23981078 + Zfp180 protein_coding retained_intron MGP_CBAJ_T0102222.1 MGP_CBAJ_G0040251.1 mouse_genomes_project 7 117238761 117240027 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0011559.1 MGP_CBAJ_G0009697.1 mouse_genomes_project 7 80897975 80898228 + Gm23020 misc_RNA misc_RNA MGP_CBAJ_T0081254.1 MGP_CBAJ_G0031337.1 mouse_genomes_project 7 12196192 12299759 - MGP_CBAJ_P0081254 protein_coding protein_coding MGP_CBAJ_T0085044.1 MGP_CBAJ_G0032339.1 mouse_genomes_project 7 114833242 114834187 - MGP_CBAJ_P0085044 Olfr629 protein_coding protein_coding MGP_CBAJ_T0083763.1 MGP_CBAJ_G0032001.1 mouse_genomes_project 7 69472160 69834201 + MGP_CBAJ_P0083763 Otud7a protein_coding protein_coding MGP_CBAJ_T0083764.1 MGP_CBAJ_G0032001.1 mouse_genomes_project 7 69472186 69674746 + Otud7a protein_coding processed_transcript MGP_CBAJ_T0083765.1 MGP_CBAJ_G0032001.1 mouse_genomes_project 7 69718848 69833162 + MGP_CBAJ_P0083765 Otud7a protein_coding protein_coding MGP_CBAJ_T0083766.1 MGP_CBAJ_G0032001.1 mouse_genomes_project 7 69752137 69833904 + MGP_CBAJ_P0083766 Otud7a protein_coding unknown_likely_coding MGP_CBAJ_T0083767.1 MGP_CBAJ_G0032001.1 mouse_genomes_project 7 69829874 69833098 + MGP_CBAJ_P0083767 Otud7a protein_coding protein_coding MGP_CBAJ_T0085915.1 MGP_CBAJ_G0032636.1 mouse_genomes_project 7 137630422 138099813 + MGP_CBAJ_P0085915 Hs3st4 protein_coding protein_coding MGP_CBAJ_T0102194.1 MGP_CBAJ_G0040223.1 mouse_genomes_project 7 95402532 95403458 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0080880.1 MGP_CBAJ_G0031201.1 mouse_genomes_project 7 1301275 1317889 - MGP_CBAJ_P0080880 1700027J19Rik protein_coding protein_coding MGP_CBAJ_T0080881.1 MGP_CBAJ_G0031201.1 mouse_genomes_project 7 1301566 1317568 - MGP_CBAJ_P0080881 1700027J19Rik protein_coding protein_coding MGP_CBAJ_T0080882.1 MGP_CBAJ_G0031201.1 mouse_genomes_project 7 1301791 1317471 - MGP_CBAJ_P0080882 1700027J19Rik protein_coding protein_coding MGP_CBAJ_T0085670.1 MGP_CBAJ_G0032576.1 mouse_genomes_project 7 131878213 131894333 - MGP_CBAJ_P0085670 Knop1 protein_coding protein_coding MGP_CBAJ_T0085671.1 MGP_CBAJ_G0032576.1 mouse_genomes_project 7 131878213 131894333 - MGP_CBAJ_P0085671 Knop1 protein_coding protein_coding MGP_CBAJ_T0085672.1 MGP_CBAJ_G0032576.1 mouse_genomes_project 7 131878228 131894336 - MGP_CBAJ_P0085672 Knop1 protein_coding protein_coding MGP_CBAJ_T0085673.1 MGP_CBAJ_G0032576.1 mouse_genomes_project 7 131879774 131894019 - MGP_CBAJ_P0085673 Knop1 protein_coding protein_coding MGP_CBAJ_T0085674.1 MGP_CBAJ_G0032576.1 mouse_genomes_project 7 131881473 131893937 - MGP_CBAJ_P0085674 Knop1 protein_coding protein_coding MGP_CBAJ_T0085675.1 MGP_CBAJ_G0032576.1 mouse_genomes_project 7 131881732 131894589 - MGP_CBAJ_P0085675 Knop1 protein_coding protein_coding MGP_CBAJ_T0085676.1 MGP_CBAJ_G0032576.1 mouse_genomes_project 7 131888656 131890179 - MGP_CBAJ_P0085676 Knop1 protein_coding protein_coding MGP_CBAJ_T0082127.1 MGP_CBAJ_G0031593.1 mouse_genomes_project 7 28508903 28537058 + MGP_CBAJ_P0082127 Zfp60 protein_coding protein_coding MGP_CBAJ_T0082128.1 MGP_CBAJ_G0031593.1 mouse_genomes_project 7 28508925 28524027 + Zfp60 protein_coding retained_intron MGP_CBAJ_T0082129.1 MGP_CBAJ_G0031593.1 mouse_genomes_project 7 28508957 28530248 + MGP_CBAJ_P0082129 Zfp60 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082130.1 MGP_CBAJ_G0031593.1 mouse_genomes_project 7 28509025 28532163 + MGP_CBAJ_P0082130 Zfp60 protein_coding protein_coding MGP_CBAJ_T0082131.1 MGP_CBAJ_G0031593.1 mouse_genomes_project 7 28520087 28531725 + MGP_CBAJ_P0082131 Zfp60 protein_coding protein_coding MGP_CBAJ_T0102161.1 MGP_CBAJ_G0040190.1 mouse_genomes_project 7 52980713 52981293 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085019.1 MGP_CBAJ_G0032314.1 mouse_genomes_project 7 114196029 114197013 + MGP_CBAJ_P0085019 Olfr593 protein_coding protein_coding MGP_CBAJ_T0015708.1 MGP_CBAJ_G0013820.1 mouse_genomes_project 7 156379473 156379961 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0081670.1 MGP_CBAJ_G0031472.1 mouse_genomes_project 7 23049433 23109552 + MGP_CBAJ_P0081670 Nlrp5 protein_coding protein_coding MGP_CBAJ_T0081671.1 MGP_CBAJ_G0031472.1 mouse_genomes_project 7 23049445 23109553 + MGP_CBAJ_P0081671 Nlrp5 protein_coding protein_coding MGP_CBAJ_T0081672.1 MGP_CBAJ_G0031472.1 mouse_genomes_project 7 23067958 23109553 + MGP_CBAJ_P0081672 Nlrp5 protein_coding protein_coding MGP_CBAJ_T0102063.1 MGP_CBAJ_G0040093.1 mouse_genomes_project 7 9950965 9951805 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0082368.1 MGP_CBAJ_G0031656.1 mouse_genomes_project 7 31043726 31061374 + MGP_CBAJ_P0082368 Zfp30 protein_coding protein_coding MGP_CBAJ_T0082369.1 MGP_CBAJ_G0031656.1 mouse_genomes_project 7 31043751 31058584 + Zfp30 protein_coding retained_intron MGP_CBAJ_T0082370.1 MGP_CBAJ_G0031656.1 mouse_genomes_project 7 31045970 31061381 + MGP_CBAJ_P0082370 Zfp30 protein_coding protein_coding MGP_CBAJ_T0081097.1 MGP_CBAJ_G0031268.1 mouse_genomes_project 7 3891598 3892537 - MGP_CBAJ_P0081097 Olfr5 protein_coding protein_coding MGP_CBAJ_T0086841.1 MGP_CBAJ_G0032815.1 mouse_genomes_project 7 154309833 154412031 + MGP_CBAJ_P0086841 Jakmip3 protein_coding protein_coding MGP_CBAJ_T0086842.1 MGP_CBAJ_G0032815.1 mouse_genomes_project 7 154309853 154412025 + MGP_CBAJ_P0086842 Jakmip3 protein_coding protein_coding MGP_CBAJ_T0086843.1 MGP_CBAJ_G0032815.1 mouse_genomes_project 7 154373343 154433331 + MGP_CBAJ_P0086843 Jakmip3 protein_coding unknown_likely_coding MGP_CBAJ_T0086844.1 MGP_CBAJ_G0032815.1 mouse_genomes_project 7 154431937 154451232 + MGP_CBAJ_P0086844 Jakmip3 protein_coding protein_coding MGP_CBAJ_T0008809.1 MGP_CBAJ_G0007104.1 mouse_genomes_project 7 80241102 80245421 - Gm6567 lincRNA lincRNA MGP_CBAJ_T0081905.1 MGP_CBAJ_G0031538.1 mouse_genomes_project 7 25704276 25730582 - MGP_CBAJ_P0081905 protein_coding protein_coding MGP_CBAJ_T0081906.1 MGP_CBAJ_G0031538.1 mouse_genomes_project 7 25704276 25730582 - MGP_CBAJ_P0081906 protein_coding protein_coding MGP_CBAJ_T0081907.1 MGP_CBAJ_G0031538.1 mouse_genomes_project 7 25705074 25730582 - MGP_CBAJ_P0081907 protein_coding protein_coding MGP_CBAJ_T0086813.1 MGP_CBAJ_G0032808.1 mouse_genomes_project 7 152399309 152535125 - MGP_CBAJ_P0086813 Ebf3 protein_coding protein_coding MGP_CBAJ_T0086814.1 MGP_CBAJ_G0032808.1 mouse_genomes_project 7 152399309 152535125 - MGP_CBAJ_P0086814 Ebf3 protein_coding protein_coding MGP_CBAJ_T0086815.1 MGP_CBAJ_G0032808.1 mouse_genomes_project 7 152399309 152535125 - MGP_CBAJ_P0086815 Ebf3 protein_coding protein_coding MGP_CBAJ_T0086816.1 MGP_CBAJ_G0032808.1 mouse_genomes_project 7 152400334 152535094 - MGP_CBAJ_P0086816 Ebf3 protein_coding protein_coding MGP_CBAJ_T0083480.1 MGP_CBAJ_G0031925.1 mouse_genomes_project 7 50111819 50133328 + MGP_CBAJ_P0083480 Tmem143 protein_coding protein_coding MGP_CBAJ_T0083481.1 MGP_CBAJ_G0031925.1 mouse_genomes_project 7 50111959 50133328 + MGP_CBAJ_P0083481 Tmem143 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083482.1 MGP_CBAJ_G0031925.1 mouse_genomes_project 7 50111979 50133324 + MGP_CBAJ_P0083482 Tmem143 protein_coding protein_coding MGP_CBAJ_T0083483.1 MGP_CBAJ_G0031925.1 mouse_genomes_project 7 50112298 50117007 + Tmem143 protein_coding retained_intron MGP_CBAJ_T0083484.1 MGP_CBAJ_G0031925.1 mouse_genomes_project 7 50112301 50123865 + Tmem143 protein_coding processed_transcript MGP_CBAJ_T0083485.1 MGP_CBAJ_G0031925.1 mouse_genomes_project 7 50112307 50123112 + Tmem143 protein_coding retained_intron MGP_CBAJ_T0083486.1 MGP_CBAJ_G0031925.1 mouse_genomes_project 7 50112307 50125172 + MGP_CBAJ_P0083486 Tmem143 protein_coding protein_coding MGP_CBAJ_T0083487.1 MGP_CBAJ_G0031925.1 mouse_genomes_project 7 50124509 50125114 + Tmem143 protein_coding processed_transcript MGP_CBAJ_T0083488.1 MGP_CBAJ_G0031925.1 mouse_genomes_project 7 50131912 50132890 + Tmem143 protein_coding processed_transcript MGP_CBAJ_T0005099.1 MGP_CBAJ_G0004337.1 mouse_genomes_project 7 30782376 30784827 - Gm29326 antisense antisense MGP_CBAJ_T0082788.1 MGP_CBAJ_G0031749.1 mouse_genomes_project 7 36419656 36477473 - MGP_CBAJ_P0082788 Lsm14a protein_coding protein_coding MGP_CBAJ_T0082789.1 MGP_CBAJ_G0031749.1 mouse_genomes_project 7 36419673 36428506 - MGP_CBAJ_P0082789 Lsm14a protein_coding protein_coding MGP_CBAJ_T0082790.1 MGP_CBAJ_G0031749.1 mouse_genomes_project 7 36420725 36481101 - MGP_CBAJ_P0082790 Lsm14a protein_coding nonsense_mediated_decay MGP_CBAJ_T0082791.1 MGP_CBAJ_G0031749.1 mouse_genomes_project 7 36420948 36453352 - MGP_CBAJ_P0082791 Lsm14a protein_coding nonsense_mediated_decay MGP_CBAJ_T0082792.1 MGP_CBAJ_G0031749.1 mouse_genomes_project 7 36425806 36428567 - Lsm14a protein_coding retained_intron MGP_CBAJ_T0082793.1 MGP_CBAJ_G0031749.1 mouse_genomes_project 7 36428493 36477265 - MGP_CBAJ_P0082793 Lsm14a protein_coding protein_coding MGP_CBAJ_T0082794.1 MGP_CBAJ_G0031749.1 mouse_genomes_project 7 36428824 36476866 - MGP_CBAJ_P0082794 Lsm14a protein_coding protein_coding MGP_CBAJ_T0082795.1 MGP_CBAJ_G0031749.1 mouse_genomes_project 7 36474367 36476947 - Lsm14a protein_coding retained_intron MGP_CBAJ_T0081266.1 MGP_CBAJ_G0031345.1 mouse_genomes_project 7 12984717 12985760 - MGP_CBAJ_P0081266 protein_coding protein_coding MGP_CBAJ_T0102075.1 MGP_CBAJ_G0040105.1 mouse_genomes_project 7 12526572 12532866 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081345.1 MGP_CBAJ_G0031368.1 mouse_genomes_project 7 15232575 15302807 - MGP_CBAJ_P0081345 Sae1 protein_coding protein_coding MGP_CBAJ_T0087371.1 MGP_CBAJ_G0032941.1 mouse_genomes_project 7 159010683 159053746 + MGP_CBAJ_P0087371 Kcnq1 protein_coding protein_coding MGP_CBAJ_T0087372.1 MGP_CBAJ_G0032941.1 mouse_genomes_project 7 159010836 159053746 + MGP_CBAJ_P0087372 Kcnq1 protein_coding protein_coding MGP_CBAJ_T0087373.1 MGP_CBAJ_G0032941.1 mouse_genomes_project 7 159011066 159053746 + MGP_CBAJ_P0087373 Kcnq1 protein_coding protein_coding MGP_CBAJ_T0087374.1 MGP_CBAJ_G0032941.1 mouse_genomes_project 7 159011575 159343772 + MGP_CBAJ_P0087374 Kcnq1 protein_coding protein_coding MGP_CBAJ_T0087375.1 MGP_CBAJ_G0032941.1 mouse_genomes_project 7 159011872 159342855 + MGP_CBAJ_P0087375 Kcnq1 protein_coding protein_coding MGP_CBAJ_T0087376.1 MGP_CBAJ_G0032941.1 mouse_genomes_project 7 159012672 159053746 + MGP_CBAJ_P0087376 Kcnq1 protein_coding protein_coding MGP_CBAJ_T0087377.1 MGP_CBAJ_G0032941.1 mouse_genomes_project 7 159013515 159053746 + MGP_CBAJ_P0087377 Kcnq1 protein_coding protein_coding MGP_CBAJ_T0015474.1 MGP_CBAJ_G0013586.1 mouse_genomes_project 7 10693164 10694611 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0085286.1 MGP_CBAJ_G0032464.1 mouse_genomes_project 7 118852684 118893807 + MGP_CBAJ_P0085286 Nlrp14 protein_coding protein_coding MGP_CBAJ_T0085287.1 MGP_CBAJ_G0032464.1 mouse_genomes_project 7 118878524 118893816 + MGP_CBAJ_P0085287 Nlrp14 protein_coding protein_coding MGP_CBAJ_T0081729.1 MGP_CBAJ_G0031496.1 mouse_genomes_project 7 24313555 24333361 + MGP_CBAJ_P0081729 Kcnn4 protein_coding protein_coding MGP_CBAJ_T0081730.1 MGP_CBAJ_G0031496.1 mouse_genomes_project 7 24313591 24333357 + MGP_CBAJ_P0081730 Kcnn4 protein_coding protein_coding MGP_CBAJ_T0081731.1 MGP_CBAJ_G0031496.1 mouse_genomes_project 7 24313630 24332916 + MGP_CBAJ_P0081731 Kcnn4 protein_coding protein_coding MGP_CBAJ_T0081732.1 MGP_CBAJ_G0031496.1 mouse_genomes_project 7 24328316 24332946 + Kcnn4 protein_coding retained_intron MGP_CBAJ_T0081733.1 MGP_CBAJ_G0031496.1 mouse_genomes_project 7 24331211 24334881 + Kcnn4 protein_coding retained_intron MGP_CBAJ_T0018080.1 MGP_CBAJ_G0015402.1 mouse_genomes_project 7 30794485 30801433 - A330087D11Rik processed_transcript processed_transcript MGP_CBAJ_T0083583.1 MGP_CBAJ_G0031949.1 mouse_genomes_project 7 51411901 51416073 + MGP_CBAJ_P0083583 Tmem86a protein_coding protein_coding MGP_CBAJ_T0098085.1 MGP_CBAJ_G0036358.1 mouse_genomes_project 7 19669857 19669976 - n-R5s152 rRNA rRNA MGP_CBAJ_T0085071.1 MGP_CBAJ_G0032366.1 mouse_genomes_project 7 115310943 115312858 - MGP_CBAJ_P0085071 4931431F19Rik protein_coding protein_coding MGP_CBAJ_T0081741.1 MGP_CBAJ_G0031498.1 mouse_genomes_project 7 24382243 24399989 - MGP_CBAJ_P0081741 Irgc1 protein_coding protein_coding MGP_CBAJ_T0081742.1 MGP_CBAJ_G0031498.1 mouse_genomes_project 7 24382243 24385851 - MGP_CBAJ_P0081742 Irgc1 protein_coding protein_coding MGP_CBAJ_T0081743.1 MGP_CBAJ_G0031498.1 mouse_genomes_project 7 24383465 24406528 - MGP_CBAJ_P0081743 Irgc1 protein_coding protein_coding MGP_CBAJ_T0081744.1 MGP_CBAJ_G0031498.1 mouse_genomes_project 7 24404836 24406654 - Irgc1 protein_coding processed_transcript MGP_CBAJ_T0081745.1 MGP_CBAJ_G0031498.1 mouse_genomes_project 7 24405239 24406644 - Irgc1 protein_coding processed_transcript MGP_CBAJ_T0100743.1 MGP_CBAJ_G0038998.1 mouse_genomes_project 7 68592124 68592252 + Gm22494 snoRNA snoRNA MGP_CBAJ_T0002210.1 MGP_CBAJ_G0002125.1 mouse_genomes_project 7 71585418 71585829 - TEC TEC MGP_CBAJ_T0084945.1 MGP_CBAJ_G0032271.1 mouse_genomes_project 7 112897189 113021800 - MGP_CBAJ_P0084945 Nup98 protein_coding unknown_likely_coding MGP_CBAJ_T0084946.1 MGP_CBAJ_G0032271.1 mouse_genomes_project 7 112921559 113021823 - MGP_CBAJ_P0084946 Nup98 protein_coding protein_coding MGP_CBAJ_T0083293.1 MGP_CBAJ_G0031880.1 mouse_genomes_project 7 49284120 49288479 - MGP_CBAJ_P0083293 Dkkl1 protein_coding protein_coding MGP_CBAJ_T0084827.1 MGP_CBAJ_G0032250.1 mouse_genomes_project 7 111954746 111984263 + MGP_CBAJ_P0084827 Stard10 protein_coding protein_coding MGP_CBAJ_T0084828.1 MGP_CBAJ_G0032250.1 mouse_genomes_project 7 111958987 111983776 + MGP_CBAJ_P0084828 Stard10 protein_coding protein_coding MGP_CBAJ_T0084829.1 MGP_CBAJ_G0032250.1 mouse_genomes_project 7 111959179 111980892 + MGP_CBAJ_P0084829 Stard10 protein_coding protein_coding MGP_CBAJ_T0084830.1 MGP_CBAJ_G0032250.1 mouse_genomes_project 7 111959404 111983828 + MGP_CBAJ_P0084830 Stard10 protein_coding protein_coding MGP_CBAJ_T0084831.1 MGP_CBAJ_G0032250.1 mouse_genomes_project 7 111959476 111983946 + MGP_CBAJ_P0084831 Stard10 protein_coding protein_coding MGP_CBAJ_T0084832.1 MGP_CBAJ_G0032250.1 mouse_genomes_project 7 111959517 111983688 + MGP_CBAJ_P0084832 Stard10 protein_coding protein_coding MGP_CBAJ_T0084833.1 MGP_CBAJ_G0032250.1 mouse_genomes_project 7 111959661 111981935 + MGP_CBAJ_P0084833 Stard10 protein_coding protein_coding MGP_CBAJ_T0084834.1 MGP_CBAJ_G0032250.1 mouse_genomes_project 7 111980114 111983776 + MGP_CBAJ_P0084834 Stard10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0015534.1 MGP_CBAJ_G0013646.1 mouse_genomes_project 7 35331105 35331240 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0080839.1 MGP_CBAJ_G0031195.1 mouse_genomes_project 7 811793 826227 - MGP_CBAJ_P0080839 protein_coding protein_coding MGP_CBAJ_T0099506.1 MGP_CBAJ_G0037761.1 mouse_genomes_project 7 106975689 106975798 - Gm22226 snRNA snRNA MGP_CBAJ_T0085784.1 MGP_CBAJ_G0032608.1 mouse_genomes_project 7 134265770 134298305 + MGP_CBAJ_P0085784 Mfsd13b protein_coding protein_coding MGP_CBAJ_T0085785.1 MGP_CBAJ_G0032608.1 mouse_genomes_project 7 134265786 134274726 + MGP_CBAJ_P0085785 Mfsd13b protein_coding protein_coding MGP_CBAJ_T0085786.1 MGP_CBAJ_G0032608.1 mouse_genomes_project 7 134265789 134272339 + MGP_CBAJ_P0085786 Mfsd13b protein_coding protein_coding MGP_CBAJ_T0085787.1 MGP_CBAJ_G0032608.1 mouse_genomes_project 7 134275080 134298305 + MGP_CBAJ_P0085787 Mfsd13b protein_coding protein_coding MGP_CBAJ_T0099509.1 MGP_CBAJ_G0037764.1 mouse_genomes_project 7 115466876 115466984 - Gm24846 snRNA snRNA MGP_CBAJ_T0084261.1 MGP_CBAJ_G0032089.1 mouse_genomes_project 7 88978890 88992901 + MGP_CBAJ_P0084261 Zscan2 protein_coding protein_coding MGP_CBAJ_T0084262.1 MGP_CBAJ_G0032089.1 mouse_genomes_project 7 88978921 88981440 + MGP_CBAJ_P0084262 Zscan2 protein_coding protein_coding MGP_CBAJ_T0084263.1 MGP_CBAJ_G0032089.1 mouse_genomes_project 7 88978923 88993820 + MGP_CBAJ_P0084263 Zscan2 protein_coding protein_coding MGP_CBAJ_T0084264.1 MGP_CBAJ_G0032089.1 mouse_genomes_project 7 88980078 88997492 + MGP_CBAJ_P0084264 Zscan2 protein_coding protein_coding MGP_CBAJ_T0084265.1 MGP_CBAJ_G0032089.1 mouse_genomes_project 7 88980874 88993030 + MGP_CBAJ_P0084265 Zscan2 protein_coding protein_coding MGP_CBAJ_T0008779.1 MGP_CBAJ_G0007081.1 mouse_genomes_project 7 70171872 70178460 - Gm45054 lincRNA lincRNA MGP_CBAJ_T0018169.1 MGP_CBAJ_G0015438.1 mouse_genomes_project 7 145430555 145435587 - Gm5602 processed_transcript processed_transcript MGP_CBAJ_T0002261.1 MGP_CBAJ_G0002175.1 mouse_genomes_project 7 135966293 135969016 + TEC TEC MGP_CBAJ_T0083478.1 MGP_CBAJ_G0031924.1 mouse_genomes_project 7 50100099 50111579 - Syngr4 protein_coding processed_transcript MGP_CBAJ_T0083479.1 MGP_CBAJ_G0031924.1 mouse_genomes_project 7 50101772 50110663 - MGP_CBAJ_P0083479 Syngr4 protein_coding protein_coding MGP_CBAJ_T0087407.1 MGP_CBAJ_G0032951.1 mouse_genomes_project 7 159728331 159731614 - MGP_CBAJ_P0087407 Mrgprg protein_coding protein_coding MGP_CBAJ_T0082009.1 MGP_CBAJ_G0031569.1 mouse_genomes_project 7 27804786 27816666 - MGP_CBAJ_P0082009 Rab4b protein_coding protein_coding MGP_CBAJ_T0082010.1 MGP_CBAJ_G0031569.1 mouse_genomes_project 7 27804788 27816580 - MGP_CBAJ_P0082010 Rab4b protein_coding nonsense_mediated_decay MGP_CBAJ_T0082011.1 MGP_CBAJ_G0031569.1 mouse_genomes_project 7 27804789 27816585 - Rab4b protein_coding retained_intron MGP_CBAJ_T0082013.1 MGP_CBAJ_G0031569.1 mouse_genomes_project 7 27805057 27816658 - Rab4b protein_coding processed_transcript MGP_CBAJ_T0082014.1 MGP_CBAJ_G0031569.1 mouse_genomes_project 7 27810049 27812163 - Rab4b protein_coding retained_intron MGP_CBAJ_T0082015.1 MGP_CBAJ_G0031569.1 mouse_genomes_project 7 27810360 27812110 - Rab4b protein_coding processed_transcript MGP_CBAJ_T0082016.1 MGP_CBAJ_G0031569.1 mouse_genomes_project 7 27813447 27816646 - Rab4b protein_coding processed_transcript MGP_CBAJ_T0082017.1 MGP_CBAJ_G0031569.1 mouse_genomes_project 7 27813478 27816593 - Rab4b protein_coding processed_transcript MGP_CBAJ_T0018162.1 MGP_CBAJ_G0015434.1 mouse_genomes_project 7 141567116 141578096 + B130055M24Rik processed_transcript processed_transcript MGP_CBAJ_T0081698.1 MGP_CBAJ_G0031487.1 mouse_genomes_project 7 24055967 24063155 + MGP_CBAJ_P0081698 Zfp114 protein_coding protein_coding MGP_CBAJ_T0081699.1 MGP_CBAJ_G0031487.1 mouse_genomes_project 7 24055993 24065257 + MGP_CBAJ_P0081699 Zfp114 protein_coding protein_coding MGP_CBAJ_T0081700.1 MGP_CBAJ_G0031487.1 mouse_genomes_project 7 24058271 24066130 + MGP_CBAJ_P0081700 Zfp114 protein_coding protein_coding MGP_CBAJ_T0008777.1 MGP_CBAJ_G0007080.1 mouse_genomes_project 7 70125888 70155220 + Gm45055 lincRNA lincRNA MGP_CBAJ_T0008778.1 MGP_CBAJ_G0007080.1 mouse_genomes_project 7 70135915 70155190 + Gm45055 lincRNA lincRNA MGP_CBAJ_T0102124.1 MGP_CBAJ_G0040153.1 mouse_genomes_project 7 41566921 41575290 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0083411.1 MGP_CBAJ_G0031903.1 mouse_genomes_project 7 49768005 49769589 - MGP_CBAJ_P0083411 Fgf21 protein_coding protein_coding MGP_CBAJ_T0008949.1 MGP_CBAJ_G0007192.1 mouse_genomes_project 7 148496556 148497933 - Gm28747 lincRNA lincRNA MGP_CBAJ_T0086809.1 MGP_CBAJ_G0032804.1 mouse_genomes_project 7 150576761 150597162 - MGP_CBAJ_P0086809 Clrn3 protein_coding protein_coding MGP_CBAJ_T0081118.1 MGP_CBAJ_G0031281.1 mouse_genomes_project 7 7837400 7855825 - MGP_CBAJ_P0081118 protein_coding protein_coding MGP_CBAJ_T0082869.1 MGP_CBAJ_G0031764.1 mouse_genomes_project 7 37851591 37858181 - MGP_CBAJ_P0082869 Rgs9bp protein_coding protein_coding MGP_CBAJ_T0002195.1 MGP_CBAJ_G0002110.1 mouse_genomes_project 7 60439959 60441350 + TEC TEC MGP_CBAJ_T0083315.1 MGP_CBAJ_G0031883.1 mouse_genomes_project 7 49364375 49375857 + MGP_CBAJ_P0083315 protein_coding protein_coding MGP_CBAJ_T0083316.1 MGP_CBAJ_G0031883.1 mouse_genomes_project 7 49369351 49372126 + protein_coding processed_transcript MGP_CBAJ_T0083317.1 MGP_CBAJ_G0031883.1 mouse_genomes_project 7 49369602 49373521 + protein_coding retained_intron MGP_CBAJ_T0083318.1 MGP_CBAJ_G0031883.1 mouse_genomes_project 7 49369638 49375444 + MGP_CBAJ_P0083318 protein_coding protein_coding MGP_CBAJ_T0083319.1 MGP_CBAJ_G0031883.1 mouse_genomes_project 7 49369735 49375856 + MGP_CBAJ_P0083319 protein_coding protein_coding MGP_CBAJ_T0083320.1 MGP_CBAJ_G0031883.1 mouse_genomes_project 7 49373998 49375861 + protein_coding retained_intron MGP_CBAJ_T0085311.1 MGP_CBAJ_G0032482.1 mouse_genomes_project 7 119876914 119877886 - MGP_CBAJ_P0085311 Olfr482 protein_coding protein_coding MGP_CBAJ_T0008864.1 MGP_CBAJ_G0007138.1 mouse_genomes_project 7 102603921 102711158 + Gm26862 lincRNA lincRNA MGP_CBAJ_T0015517.1 MGP_CBAJ_G0013629.1 mouse_genomes_project 7 26013556 26014172 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005123.1 MGP_CBAJ_G0004356.1 mouse_genomes_project 7 40821741 40821957 - D530033B14Rik antisense antisense MGP_CBAJ_T0005124.1 MGP_CBAJ_G0004356.1 mouse_genomes_project 7 40821937 40838364 - D530033B14Rik antisense antisense MGP_CBAJ_T0082037.1 MGP_CBAJ_G0031575.1 mouse_genomes_project 7 27892267 27920123 + MGP_CBAJ_P0082037 Coq8b protein_coding protein_coding MGP_CBAJ_T0082038.1 MGP_CBAJ_G0031575.1 mouse_genomes_project 7 27892457 27920117 + MGP_CBAJ_P0082038 Coq8b protein_coding protein_coding MGP_CBAJ_T0082039.1 MGP_CBAJ_G0031575.1 mouse_genomes_project 7 27892602 27920118 + MGP_CBAJ_P0082039 Coq8b protein_coding nonsense_mediated_decay MGP_CBAJ_T0082040.1 MGP_CBAJ_G0031575.1 mouse_genomes_project 7 27899301 27903073 + Coq8b protein_coding processed_transcript MGP_CBAJ_T0082041.1 MGP_CBAJ_G0031575.1 mouse_genomes_project 7 27899562 27902366 + Coq8b protein_coding retained_intron MGP_CBAJ_T0082042.1 MGP_CBAJ_G0031575.1 mouse_genomes_project 7 27912346 27920116 + Coq8b protein_coding retained_intron MGP_CBAJ_T0082043.1 MGP_CBAJ_G0031575.1 mouse_genomes_project 7 27912548 27919579 + Coq8b protein_coding processed_transcript MGP_CBAJ_T0015503.1 MGP_CBAJ_G0013615.1 mouse_genomes_project 7 17460139 17461646 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0085295.1 MGP_CBAJ_G0032468.1 mouse_genomes_project 7 119320094 119480991 + MGP_CBAJ_P0085295 Ppfibp2 protein_coding protein_coding MGP_CBAJ_T0085296.1 MGP_CBAJ_G0032468.1 mouse_genomes_project 7 119331658 119484679 + MGP_CBAJ_P0085296 Ppfibp2 protein_coding protein_coding MGP_CBAJ_T0082512.1 MGP_CBAJ_G0031693.1 mouse_genomes_project 7 31930057 31942881 - MGP_CBAJ_P0082512 Arhgap33 protein_coding unknown_likely_coding MGP_CBAJ_T0011563.1 MGP_CBAJ_G0009701.1 mouse_genomes_project 7 100485505 100485715 - Gm27470 misc_RNA misc_RNA MGP_CBAJ_T0083353.1 MGP_CBAJ_G0031892.1 mouse_genomes_project 7 49529474 49545701 - MGP_CBAJ_P0083353 Ruvbl2 protein_coding protein_coding MGP_CBAJ_T0083354.1 MGP_CBAJ_G0031892.1 mouse_genomes_project 7 49529520 49542244 - MGP_CBAJ_P0083354 Ruvbl2 protein_coding protein_coding MGP_CBAJ_T0083355.1 MGP_CBAJ_G0031892.1 mouse_genomes_project 7 49532573 49542330 - MGP_CBAJ_P0083355 Ruvbl2 protein_coding protein_coding MGP_CBAJ_T0086942.1 MGP_CBAJ_G0032841.1 mouse_genomes_project 7 155727718 155742467 + MGP_CBAJ_P0086942 Cd163l1 protein_coding protein_coding MGP_CBAJ_T0010795.1 MGP_CBAJ_G0008933.1 mouse_genomes_project 7 140295023 140295098 - Mir7058 miRNA miRNA MGP_CBAJ_T0085847.1 MGP_CBAJ_G0032625.1 mouse_genomes_project 7 135636302 135655010 - MGP_CBAJ_P0085847 Ern2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085848.1 MGP_CBAJ_G0032625.1 mouse_genomes_project 7 135636349 135655007 - MGP_CBAJ_P0085848 Ern2 protein_coding protein_coding MGP_CBAJ_T0085849.1 MGP_CBAJ_G0032625.1 mouse_genomes_project 7 135636474 135652758 - MGP_CBAJ_P0085849 Ern2 protein_coding unknown_likely_coding MGP_CBAJ_T0010791.1 MGP_CBAJ_G0008929.1 mouse_genomes_project 7 125037093 125037222 + Gm44462 miRNA miRNA MGP_CBAJ_T0081613.1 MGP_CBAJ_G0031454.1 mouse_genomes_project 7 19260748 19265270 - MGP_CBAJ_P0081613 protein_coding protein_coding MGP_CBAJ_T0081614.1 MGP_CBAJ_G0031454.1 mouse_genomes_project 7 19260753 19262297 - MGP_CBAJ_P0081614 protein_coding protein_coding MGP_CBAJ_T0081615.1 MGP_CBAJ_G0031454.1 mouse_genomes_project 7 19260753 19269851 - MGP_CBAJ_P0081615 protein_coding protein_coding MGP_CBAJ_T0081616.1 MGP_CBAJ_G0031454.1 mouse_genomes_project 7 19260753 19266358 - MGP_CBAJ_P0081616 protein_coding protein_coding MGP_CBAJ_T0081617.1 MGP_CBAJ_G0031454.1 mouse_genomes_project 7 19261660 19269864 - MGP_CBAJ_P0081617 protein_coding protein_coding MGP_CBAJ_T0086374.1 MGP_CBAJ_G0032717.1 mouse_genomes_project 7 141722902 141741452 + MGP_CBAJ_P0086374 Rnf40 protein_coding protein_coding MGP_CBAJ_T0086375.1 MGP_CBAJ_G0032717.1 mouse_genomes_project 7 141723054 141740247 + MGP_CBAJ_P0086375 Rnf40 protein_coding protein_coding MGP_CBAJ_T0086376.1 MGP_CBAJ_G0032717.1 mouse_genomes_project 7 141723054 141740238 + MGP_CBAJ_P0086376 Rnf40 protein_coding protein_coding MGP_CBAJ_T0086377.1 MGP_CBAJ_G0032717.1 mouse_genomes_project 7 141726557 141728867 + Rnf40 protein_coding retained_intron MGP_CBAJ_T0086378.1 MGP_CBAJ_G0032717.1 mouse_genomes_project 7 141727018 141730373 + Rnf40 protein_coding retained_intron MGP_CBAJ_T0086379.1 MGP_CBAJ_G0032717.1 mouse_genomes_project 7 141730953 141737256 + Rnf40 protein_coding retained_intron MGP_CBAJ_T0081406.1 MGP_CBAJ_G0031384.1 mouse_genomes_project 7 15963577 15967744 + MGP_CBAJ_P0081406 Pnmal2 protein_coding protein_coding MGP_CBAJ_T0087192.1 MGP_CBAJ_G0032906.1 mouse_genomes_project 7 157199120 157250920 - MGP_CBAJ_P0087192 Chid1 protein_coding protein_coding MGP_CBAJ_T0087193.1 MGP_CBAJ_G0032906.1 mouse_genomes_project 7 157201380 157250882 - Chid1 protein_coding retained_intron MGP_CBAJ_T0087194.1 MGP_CBAJ_G0032906.1 mouse_genomes_project 7 157202031 157244002 - MGP_CBAJ_P0087194 Chid1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087195.1 MGP_CBAJ_G0032906.1 mouse_genomes_project 7 157202031 157250930 - MGP_CBAJ_P0087195 Chid1 protein_coding protein_coding MGP_CBAJ_T0087196.1 MGP_CBAJ_G0032906.1 mouse_genomes_project 7 157216434 157234692 - Chid1 protein_coding processed_transcript MGP_CBAJ_T0087197.1 MGP_CBAJ_G0032906.1 mouse_genomes_project 7 157223639 157250593 - MGP_CBAJ_P0087197 Chid1 protein_coding protein_coding MGP_CBAJ_T0087198.1 MGP_CBAJ_G0032906.1 mouse_genomes_project 7 157242974 157250895 - Chid1 protein_coding retained_intron MGP_CBAJ_T0082390.1 MGP_CBAJ_G0031662.1 mouse_genomes_project 7 31235309 31248208 - MGP_CBAJ_P0082390 protein_coding protein_coding MGP_CBAJ_T0082391.1 MGP_CBAJ_G0031662.1 mouse_genomes_project 7 31236165 31261460 - MGP_CBAJ_P0082391 protein_coding protein_coding MGP_CBAJ_T0082392.1 MGP_CBAJ_G0031662.1 mouse_genomes_project 7 31237238 31261328 - MGP_CBAJ_P0082392 protein_coding unknown_likely_coding MGP_CBAJ_T0082393.1 MGP_CBAJ_G0031662.1 mouse_genomes_project 7 31242399 31261462 - protein_coding processed_transcript MGP_CBAJ_T0085918.1 MGP_CBAJ_G0032638.1 mouse_genomes_project 7 139274335 139298331 - MGP_CBAJ_P0085918 Nsmce1 protein_coding protein_coding MGP_CBAJ_T0085919.1 MGP_CBAJ_G0032638.1 mouse_genomes_project 7 139277807 139298134 - MGP_CBAJ_P0085919 Nsmce1 protein_coding protein_coding MGP_CBAJ_T0085920.1 MGP_CBAJ_G0032638.1 mouse_genomes_project 7 139277861 139285256 - Nsmce1 protein_coding processed_transcript MGP_CBAJ_T0102147.1 MGP_CBAJ_G0040176.1 mouse_genomes_project 7 52056717 52571837 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0082423.1 MGP_CBAJ_G0031674.1 mouse_genomes_project 7 31551070 31564272 - MGP_CBAJ_P0082423 Capns1 protein_coding protein_coding MGP_CBAJ_T0082424.1 MGP_CBAJ_G0031674.1 mouse_genomes_project 7 31551118 31560050 - MGP_CBAJ_P0082424 Capns1 protein_coding protein_coding MGP_CBAJ_T0082425.1 MGP_CBAJ_G0031674.1 mouse_genomes_project 7 31551296 31556090 - Capns1 protein_coding processed_transcript MGP_CBAJ_T0082426.1 MGP_CBAJ_G0031674.1 mouse_genomes_project 7 31551611 31560725 - Capns1 protein_coding processed_transcript MGP_CBAJ_T0082427.1 MGP_CBAJ_G0031674.1 mouse_genomes_project 7 31551635 31559354 - Capns1 protein_coding processed_transcript MGP_CBAJ_T0082428.1 MGP_CBAJ_G0031674.1 mouse_genomes_project 7 31555912 31561036 - MGP_CBAJ_P0082428 Capns1 protein_coding protein_coding MGP_CBAJ_T0082429.1 MGP_CBAJ_G0031674.1 mouse_genomes_project 7 31560489 31564144 - Capns1 protein_coding retained_intron MGP_CBAJ_T0085840.1 MGP_CBAJ_G0032623.1 mouse_genomes_project 7 135585224 135608636 + MGP_CBAJ_P0085840 Dctn5 protein_coding protein_coding MGP_CBAJ_T0085841.1 MGP_CBAJ_G0032623.1 mouse_genomes_project 7 135585237 135608636 + Dctn5 protein_coding retained_intron MGP_CBAJ_T0085842.1 MGP_CBAJ_G0032623.1 mouse_genomes_project 7 135585255 135592043 + MGP_CBAJ_P0085842 Dctn5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085843.1 MGP_CBAJ_G0032623.1 mouse_genomes_project 7 135600705 135608173 + MGP_CBAJ_P0085843 Dctn5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086962.1 MGP_CBAJ_G0032859.1 mouse_genomes_project 7 156372194 156382812 - MGP_CBAJ_P0086962 Syce1 protein_coding protein_coding MGP_CBAJ_T0085312.1 MGP_CBAJ_G0032483.1 mouse_genomes_project 7 119885629 119886694 + MGP_CBAJ_P0085312 Olfr483 protein_coding protein_coding MGP_CBAJ_T0083404.1 MGP_CBAJ_G0031902.1 mouse_genomes_project 7 49717131 49740779 + MGP_CBAJ_P0083404 Bcat2 protein_coding protein_coding MGP_CBAJ_T0083405.1 MGP_CBAJ_G0031902.1 mouse_genomes_project 7 49717328 49736695 + Bcat2 protein_coding retained_intron MGP_CBAJ_T0083406.1 MGP_CBAJ_G0031902.1 mouse_genomes_project 7 49717351 49740779 + MGP_CBAJ_P0083406 Bcat2 protein_coding protein_coding MGP_CBAJ_T0083407.1 MGP_CBAJ_G0031902.1 mouse_genomes_project 7 49717974 49740779 + MGP_CBAJ_P0083407 Bcat2 protein_coding protein_coding MGP_CBAJ_T0083408.1 MGP_CBAJ_G0031902.1 mouse_genomes_project 7 49719847 49740779 + MGP_CBAJ_P0083408 Bcat2 protein_coding protein_coding MGP_CBAJ_T0083409.1 MGP_CBAJ_G0031902.1 mouse_genomes_project 7 49722078 49734961 + MGP_CBAJ_P0083409 Bcat2 protein_coding protein_coding MGP_CBAJ_T0083410.1 MGP_CBAJ_G0031902.1 mouse_genomes_project 7 49722200 49735080 + Bcat2 protein_coding retained_intron MGP_CBAJ_T0002159.1 MGP_CBAJ_G0002074.1 mouse_genomes_project 7 16106296 16107202 + TEC TEC MGP_CBAJ_T0008690.1 MGP_CBAJ_G0007008.1 mouse_genomes_project 7 30851 72395 + lincRNA lincRNA MGP_CBAJ_T0010792.1 MGP_CBAJ_G0008930.1 mouse_genomes_project 7 126104019 126104121 - Gm23700 miRNA miRNA MGP_CBAJ_T0081981.1 MGP_CBAJ_G0031558.1 mouse_genomes_project 7 26844351 26890344 + MGP_CBAJ_P0081981 Nlrp4a protein_coding protein_coding MGP_CBAJ_T0082153.1 MGP_CBAJ_G0031602.1 mouse_genomes_project 7 29049867 29071017 + MGP_CBAJ_P0082153 Fbl protein_coding protein_coding MGP_CBAJ_T0083356.1 MGP_CBAJ_G0031893.1 mouse_genomes_project 7 49542464 49574316 + MGP_CBAJ_P0083356 Gys1 protein_coding protein_coding MGP_CBAJ_T0083357.1 MGP_CBAJ_G0031893.1 mouse_genomes_project 7 49542497 49571680 + MGP_CBAJ_P0083357 Gys1 protein_coding protein_coding MGP_CBAJ_T0083358.1 MGP_CBAJ_G0031893.1 mouse_genomes_project 7 49563413 49567660 + Gys1 protein_coding processed_transcript MGP_CBAJ_T0083359.1 MGP_CBAJ_G0031893.1 mouse_genomes_project 7 49563539 49567684 + Gys1 protein_coding processed_transcript MGP_CBAJ_T0083360.1 MGP_CBAJ_G0031893.1 mouse_genomes_project 7 49564062 49571172 + Gys1 protein_coding retained_intron MGP_CBAJ_T0083361.1 MGP_CBAJ_G0031893.1 mouse_genomes_project 7 49566857 49567949 + Gys1 protein_coding retained_intron MGP_CBAJ_T0081098.1 MGP_CBAJ_G0031269.1 mouse_genomes_project 7 3892549 3894013 - MGP_CBAJ_P0081098 protein_coding protein_coding MGP_CBAJ_T0080840.1 MGP_CBAJ_G0031196.1 mouse_genomes_project 7 817145 826359 - MGP_CBAJ_P0080840 protein_coding protein_coding MGP_CBAJ_T0015650.1 MGP_CBAJ_G0013762.1 mouse_genomes_project 7 109128072 109128434 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099522.1 MGP_CBAJ_G0037777.1 mouse_genomes_project 7 137588008 137588114 - Gm23788 snRNA snRNA MGP_CBAJ_T0084035.1 MGP_CBAJ_G0032051.1 mouse_genomes_project 7 86710592 86724577 + Aen protein_coding processed_transcript MGP_CBAJ_T0084036.1 MGP_CBAJ_G0032051.1 mouse_genomes_project 7 86710665 86724577 + MGP_CBAJ_P0084036 Aen protein_coding protein_coding MGP_CBAJ_T0084037.1 MGP_CBAJ_G0032051.1 mouse_genomes_project 7 86710672 86721755 + MGP_CBAJ_P0084037 Aen protein_coding protein_coding MGP_CBAJ_T0084038.1 MGP_CBAJ_G0032051.1 mouse_genomes_project 7 86710747 86721752 + MGP_CBAJ_P0084038 Aen protein_coding protein_coding MGP_CBAJ_T0084039.1 MGP_CBAJ_G0032051.1 mouse_genomes_project 7 86712769 86714685 + MGP_CBAJ_P0084039 Aen protein_coding protein_coding MGP_CBAJ_T0084040.1 MGP_CBAJ_G0032051.1 mouse_genomes_project 7 86714223 86717842 + Aen protein_coding processed_transcript MGP_CBAJ_T0084041.1 MGP_CBAJ_G0032051.1 mouse_genomes_project 7 86714441 86719205 + MGP_CBAJ_P0084041 Aen protein_coding protein_coding MGP_CBAJ_T0083322.1 MGP_CBAJ_G0031885.1 mouse_genomes_project 7 49427252 49430928 + MGP_CBAJ_P0083322 Hrc protein_coding protein_coding MGP_CBAJ_T0081522.1 MGP_CBAJ_G0031429.1 mouse_genomes_project 7 18680809 18722386 + MGP_CBAJ_P0081522 Eml2 protein_coding protein_coding MGP_CBAJ_T0081523.1 MGP_CBAJ_G0031429.1 mouse_genomes_project 7 18681083 18722618 + MGP_CBAJ_P0081523 Eml2 protein_coding unknown_likely_coding MGP_CBAJ_T0081524.1 MGP_CBAJ_G0031429.1 mouse_genomes_project 7 18685480 18722612 + MGP_CBAJ_P0081524 Eml2 protein_coding protein_coding MGP_CBAJ_T0081525.1 MGP_CBAJ_G0031429.1 mouse_genomes_project 7 18685491 18722608 + MGP_CBAJ_P0081525 Eml2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081526.1 MGP_CBAJ_G0031429.1 mouse_genomes_project 7 18685514 18722609 + MGP_CBAJ_P0081526 Eml2 protein_coding protein_coding MGP_CBAJ_T0081527.1 MGP_CBAJ_G0031429.1 mouse_genomes_project 7 18685526 18689305 + MGP_CBAJ_P0081527 Eml2 protein_coding protein_coding MGP_CBAJ_T0081528.1 MGP_CBAJ_G0031429.1 mouse_genomes_project 7 18685547 18690743 + MGP_CBAJ_P0081528 Eml2 protein_coding protein_coding MGP_CBAJ_T0081529.1 MGP_CBAJ_G0031429.1 mouse_genomes_project 7 18685641 18689308 + Eml2 protein_coding processed_transcript MGP_CBAJ_T0081530.1 MGP_CBAJ_G0031429.1 mouse_genomes_project 7 18685915 18690756 + Eml2 protein_coding retained_intron MGP_CBAJ_T0083489.1 MGP_CBAJ_G0031926.1 mouse_genomes_project 7 50133937 50136764 - MGP_CBAJ_P0083489 Emp3 protein_coding protein_coding MGP_CBAJ_T0083490.1 MGP_CBAJ_G0031926.1 mouse_genomes_project 7 50133937 50137341 - MGP_CBAJ_P0083490 Emp3 protein_coding protein_coding MGP_CBAJ_T0010796.1 MGP_CBAJ_G0008934.1 mouse_genomes_project 7 140524528 140524587 - Mir7059 miRNA miRNA MGP_CBAJ_T0002211.1 MGP_CBAJ_G0002126.1 mouse_genomes_project 7 79657293 79657793 + TEC TEC MGP_CBAJ_T0086548.1 MGP_CBAJ_G0032751.1 mouse_genomes_project 7 142565631 142569101 - BC017158 protein_coding retained_intron MGP_CBAJ_T0086549.1 MGP_CBAJ_G0032751.1 mouse_genomes_project 7 142565631 142596434 - MGP_CBAJ_P0086549 BC017158 protein_coding protein_coding MGP_CBAJ_T0086550.1 MGP_CBAJ_G0032751.1 mouse_genomes_project 7 142566359 142596372 - BC017158 protein_coding retained_intron MGP_CBAJ_T0086551.1 MGP_CBAJ_G0032751.1 mouse_genomes_project 7 142566359 142596373 - BC017158 protein_coding retained_intron MGP_CBAJ_T0086552.1 MGP_CBAJ_G0032751.1 mouse_genomes_project 7 142566578 142596359 - MGP_CBAJ_P0086552 BC017158 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086553.1 MGP_CBAJ_G0032751.1 mouse_genomes_project 7 142570217 142595840 - BC017158 protein_coding retained_intron MGP_CBAJ_T0086554.1 MGP_CBAJ_G0032751.1 mouse_genomes_project 7 142570553 142586978 - BC017158 protein_coding retained_intron MGP_CBAJ_T0086555.1 MGP_CBAJ_G0032751.1 mouse_genomes_project 7 142586237 142588888 - MGP_CBAJ_P0086555 BC017158 protein_coding protein_coding MGP_CBAJ_T0084298.1 MGP_CBAJ_G0032097.1 mouse_genomes_project 7 89569709 89571509 - Rps17 protein_coding processed_transcript MGP_CBAJ_T0084299.1 MGP_CBAJ_G0032097.1 mouse_genomes_project 7 89569710 89572232 - MGP_CBAJ_P0084299 Rps17 protein_coding protein_coding MGP_CBAJ_T0084300.1 MGP_CBAJ_G0032097.1 mouse_genomes_project 7 89569717 89572212 - Rps17 protein_coding retained_intron MGP_CBAJ_T0084301.1 MGP_CBAJ_G0032097.1 mouse_genomes_project 7 89570394 89572210 - Rps17 protein_coding retained_intron MGP_CBAJ_T0084302.1 MGP_CBAJ_G0032097.1 mouse_genomes_project 7 89571681 89572202 - Rps17 protein_coding processed_transcript MGP_CBAJ_T0083364.1 MGP_CBAJ_G0031895.1 mouse_genomes_project 7 49580796 49586000 - MGP_CBAJ_P0083364 Bax protein_coding protein_coding MGP_CBAJ_T0015461.1 MGP_CBAJ_G0013573.1 mouse_genomes_project 7 1559836 1560299 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0081581.1 MGP_CBAJ_G0031442.1 mouse_genomes_project 7 18951870 18954461 - MGP_CBAJ_P0081581 protein_coding protein_coding MGP_CBAJ_T0002219.1 MGP_CBAJ_G0002133.1 mouse_genomes_project 7 81003154 81003311 + TEC TEC MGP_CBAJ_T0083603.1 MGP_CBAJ_G0031962.1 mouse_genomes_project 7 53285789 53286798 - MGP_CBAJ_P0083603 Mrgprb3 protein_coding protein_coding MGP_CBAJ_T0085926.1 MGP_CBAJ_G0032640.1 mouse_genomes_project 7 139418482 139457793 + MGP_CBAJ_P0085926 Il21r protein_coding nonsense_mediated_decay MGP_CBAJ_T0085927.1 MGP_CBAJ_G0032640.1 mouse_genomes_project 7 139446412 139459278 + MGP_CBAJ_P0085927 Il21r protein_coding protein_coding MGP_CBAJ_T0081556.1 MGP_CBAJ_G0031437.1 mouse_genomes_project 7 18889925 18892543 - MGP_CBAJ_P0081556 Cd3eap protein_coding protein_coding MGP_CBAJ_T0081557.1 MGP_CBAJ_G0031437.1 mouse_genomes_project 7 18891899 18892545 - Cd3eap protein_coding retained_intron MGP_CBAJ_T0008736.1 MGP_CBAJ_G0007049.1 mouse_genomes_project 7 38135692 38137003 + Gm28514 lincRNA lincRNA MGP_CBAJ_T0081053.1 MGP_CBAJ_G0031249.1 mouse_genomes_project 7 2568641 2623261 - MGP_CBAJ_P0081053 Nlrp2 protein_coding protein_coding MGP_CBAJ_T0081887.1 MGP_CBAJ_G0031534.1 mouse_genomes_project 7 25544201 25546285 - MGP_CBAJ_P0081887 Cnfn protein_coding protein_coding MGP_CBAJ_T0081888.1 MGP_CBAJ_G0031534.1 mouse_genomes_project 7 25544203 25546306 - MGP_CBAJ_P0081888 Cnfn protein_coding protein_coding MGP_CBAJ_T0102070.1 MGP_CBAJ_G0040100.1 mouse_genomes_project 7 10476361 10477052 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0087409.1 MGP_CBAJ_G0032953.1 mouse_genomes_project 7 159766530 159800755 - MGP_CBAJ_P0087409 Nadsyn1 protein_coding protein_coding MGP_CBAJ_T0087410.1 MGP_CBAJ_G0032953.1 mouse_genomes_project 7 159766796 159800701 - MGP_CBAJ_P0087410 Nadsyn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087411.1 MGP_CBAJ_G0032953.1 mouse_genomes_project 7 159766815 159800756 - MGP_CBAJ_P0087411 Nadsyn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087412.1 MGP_CBAJ_G0032953.1 mouse_genomes_project 7 159768795 159769788 - Nadsyn1 protein_coding retained_intron MGP_CBAJ_T0087413.1 MGP_CBAJ_G0032953.1 mouse_genomes_project 7 159790681 159800732 - MGP_CBAJ_P0087413 Nadsyn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087414.1 MGP_CBAJ_G0032953.1 mouse_genomes_project 7 159791204 159800662 - Nadsyn1 protein_coding retained_intron MGP_CBAJ_T0087415.1 MGP_CBAJ_G0032953.1 mouse_genomes_project 7 159791342 159800719 - MGP_CBAJ_P0087415 Nadsyn1 protein_coding protein_coding MGP_CBAJ_T0087416.1 MGP_CBAJ_G0032953.1 mouse_genomes_project 7 159793256 159800763 - Nadsyn1 protein_coding retained_intron MGP_CBAJ_T0083993.1 MGP_CBAJ_G0032044.1 mouse_genomes_project 7 82836118 83147733 + MGP_CBAJ_P0083993 Akap13 protein_coding protein_coding MGP_CBAJ_T0083994.1 MGP_CBAJ_G0032044.1 mouse_genomes_project 7 82914212 83147738 + MGP_CBAJ_P0083994 Akap13 protein_coding unknown_likely_coding MGP_CBAJ_T0085771.1 MGP_CBAJ_G0032605.1 mouse_genomes_project 7 134114542 134185233 + MGP_CBAJ_P0085771 Eef2k protein_coding protein_coding MGP_CBAJ_T0085772.1 MGP_CBAJ_G0032605.1 mouse_genomes_project 7 134115311 134182020 + MGP_CBAJ_P0085772 Eef2k protein_coding protein_coding MGP_CBAJ_T0085773.1 MGP_CBAJ_G0032605.1 mouse_genomes_project 7 134115329 134132288 + MGP_CBAJ_P0085773 Eef2k protein_coding protein_coding MGP_CBAJ_T0085774.1 MGP_CBAJ_G0032605.1 mouse_genomes_project 7 134124923 134178404 + MGP_CBAJ_P0085774 Eef2k protein_coding protein_coding MGP_CBAJ_T0085775.1 MGP_CBAJ_G0032605.1 mouse_genomes_project 7 134124923 134158383 + MGP_CBAJ_P0085775 Eef2k protein_coding protein_coding MGP_CBAJ_T0085776.1 MGP_CBAJ_G0032605.1 mouse_genomes_project 7 134124935 134181522 + MGP_CBAJ_P0085776 Eef2k protein_coding protein_coding MGP_CBAJ_T0085777.1 MGP_CBAJ_G0032605.1 mouse_genomes_project 7 134154315 134157902 + Eef2k protein_coding retained_intron MGP_CBAJ_T0085778.1 MGP_CBAJ_G0032605.1 mouse_genomes_project 7 134167726 134173353 + MGP_CBAJ_P0085778 Eef2k protein_coding protein_coding MGP_CBAJ_T0085779.1 MGP_CBAJ_G0032605.1 mouse_genomes_project 7 134169893 134181604 + Eef2k protein_coding processed_transcript MGP_CBAJ_T0082407.1 MGP_CBAJ_G0031668.1 mouse_genomes_project 7 31430161 31445062 - MGP_CBAJ_P0082407 Zfp566 protein_coding protein_coding MGP_CBAJ_T0082408.1 MGP_CBAJ_G0031668.1 mouse_genomes_project 7 31434947 31444998 - Zfp566 protein_coding retained_intron MGP_CBAJ_T0083595.1 MGP_CBAJ_G0031957.1 mouse_genomes_project 7 52760262 52761481 - MGP_CBAJ_P0083595 Mrgprb4 protein_coding protein_coding MGP_CBAJ_T0099487.1 MGP_CBAJ_G0037742.1 mouse_genomes_project 7 49333404 49333506 - Gm23585 snRNA snRNA MGP_CBAJ_T0008710.1 MGP_CBAJ_G0007026.1 mouse_genomes_project 7 24647357 24649173 + Gm4598 lincRNA lincRNA MGP_CBAJ_T0010701.1 MGP_CBAJ_G0008839.1 mouse_genomes_project 7 176236 176318 + Mir292 miRNA miRNA MGP_CBAJ_T0081438.1 MGP_CBAJ_G0031399.1 mouse_genomes_project 7 17585981 17591943 - MGP_CBAJ_P0081438 protein_coding protein_coding MGP_CBAJ_T0082209.1 MGP_CBAJ_G0031618.1 mouse_genomes_project 7 29450643 29452145 - MGP_CBAJ_P0082209 protein_coding protein_coding MGP_CBAJ_T0005173.1 MGP_CBAJ_G0004389.1 mouse_genomes_project 7 106349351 106351834 - Gm15412 antisense antisense MGP_CBAJ_T0083851.1 MGP_CBAJ_G0032016.1 mouse_genomes_project 7 72341121 72362754 + MGP_CBAJ_P0083851 Gm45213 protein_coding protein_coding MGP_CBAJ_T0087408.1 MGP_CBAJ_G0032952.1 mouse_genomes_project 7 159742980 159749136 - MGP_CBAJ_P0087408 Mrgpre protein_coding protein_coding MGP_CBAJ_T0015550.1 MGP_CBAJ_G0013662.1 mouse_genomes_project 7 42538578 42539042 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0085066.1 MGP_CBAJ_G0032361.1 mouse_genomes_project 7 115229695 115230640 - MGP_CBAJ_P0085066 Olfr642 protein_coding protein_coding MGP_CBAJ_T0083914.1 MGP_CBAJ_G0032029.1 mouse_genomes_project 7 73960903 74103442 - MGP_CBAJ_P0083914 Lrrc28 protein_coding protein_coding MGP_CBAJ_T0083915.1 MGP_CBAJ_G0032029.1 mouse_genomes_project 7 73960904 74099518 - MGP_CBAJ_P0083915 Lrrc28 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083916.1 MGP_CBAJ_G0032029.1 mouse_genomes_project 7 73961904 74029530 - Lrrc28 protein_coding processed_transcript MGP_CBAJ_T0083917.1 MGP_CBAJ_G0032029.1 mouse_genomes_project 7 73979728 74099554 - MGP_CBAJ_P0083917 Lrrc28 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083918.1 MGP_CBAJ_G0032029.1 mouse_genomes_project 7 73979853 73985862 - Lrrc28 protein_coding processed_transcript MGP_CBAJ_T0083919.1 MGP_CBAJ_G0032029.1 mouse_genomes_project 7 73981849 74078393 - Lrrc28 protein_coding processed_transcript MGP_CBAJ_T0083920.1 MGP_CBAJ_G0032029.1 mouse_genomes_project 7 73981940 74062655 - Lrrc28 protein_coding processed_transcript MGP_CBAJ_T0083921.1 MGP_CBAJ_G0032029.1 mouse_genomes_project 7 73981950 74078342 - Lrrc28 protein_coding processed_transcript MGP_CBAJ_T0083922.1 MGP_CBAJ_G0032029.1 mouse_genomes_project 7 73995255 74103415 - MGP_CBAJ_P0083922 Lrrc28 protein_coding protein_coding MGP_CBAJ_T0083923.1 MGP_CBAJ_G0032029.1 mouse_genomes_project 7 74047589 74103418 - MGP_CBAJ_P0083923 Lrrc28 protein_coding protein_coding MGP_CBAJ_T0083924.1 MGP_CBAJ_G0032029.1 mouse_genomes_project 7 74048591 74078364 - Lrrc28 protein_coding processed_transcript MGP_CBAJ_T0083925.1 MGP_CBAJ_G0032029.1 mouse_genomes_project 7 74076427 74103479 - MGP_CBAJ_P0083925 Lrrc28 protein_coding protein_coding MGP_CBAJ_T0015572.1 MGP_CBAJ_G0013684.1 mouse_genomes_project 7 46468444 46468928 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005220.1 MGP_CBAJ_G0004423.1 mouse_genomes_project 7 143104534 143105663 + Gm44674 antisense antisense MGP_CBAJ_T0002264.1 MGP_CBAJ_G0002178.1 mouse_genomes_project 7 136498889 136499882 - TEC TEC MGP_CBAJ_T0081431.1 MGP_CBAJ_G0031395.1 mouse_genomes_project 7 17208299 17218582 + MGP_CBAJ_P0081431 Ceacam13 protein_coding protein_coding MGP_CBAJ_T0081432.1 MGP_CBAJ_G0031395.1 mouse_genomes_project 7 17208299 17211896 + MGP_CBAJ_P0081432 Ceacam13 protein_coding protein_coding MGP_CBAJ_T0086931.1 MGP_CBAJ_G0032836.1 mouse_genomes_project 7 155638776 155651780 + MGP_CBAJ_P0086931 Mtg1 protein_coding protein_coding MGP_CBAJ_T0086932.1 MGP_CBAJ_G0032836.1 mouse_genomes_project 7 155638861 155643346 + Mtg1 protein_coding retained_intron MGP_CBAJ_T0086933.1 MGP_CBAJ_G0032836.1 mouse_genomes_project 7 155638875 155648464 + Mtg1 protein_coding retained_intron MGP_CBAJ_T0086934.1 MGP_CBAJ_G0032836.1 mouse_genomes_project 7 155639175 155639609 + Mtg1 protein_coding processed_transcript MGP_CBAJ_T0086935.1 MGP_CBAJ_G0032836.1 mouse_genomes_project 7 155641424 155648152 + Mtg1 protein_coding retained_intron MGP_CBAJ_T0086936.1 MGP_CBAJ_G0032836.1 mouse_genomes_project 7 155649950 155651439 + Mtg1 protein_coding processed_transcript MGP_CBAJ_T0081752.1 MGP_CBAJ_G0031500.1 mouse_genomes_project 7 24442761 24474125 + MGP_CBAJ_P0081752 Cadm4 protein_coding protein_coding MGP_CBAJ_T0081753.1 MGP_CBAJ_G0031500.1 mouse_genomes_project 7 24469549 24472386 + Cadm4 protein_coding processed_transcript MGP_CBAJ_T0015541.1 MGP_CBAJ_G0013653.1 mouse_genomes_project 7 36234390 36234723 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008785.1 MGP_CBAJ_G0007086.1 mouse_genomes_project 7 72069526 72072703 + 1810008I18Rik lincRNA lincRNA MGP_CBAJ_T0008786.1 MGP_CBAJ_G0007086.1 mouse_genomes_project 7 72070446 72072866 + 1810008I18Rik lincRNA lincRNA MGP_CBAJ_T0081407.1 MGP_CBAJ_G0031385.1 mouse_genomes_project 7 15981384 15989542 + MGP_CBAJ_P0081407 Pnmal1 protein_coding protein_coding MGP_CBAJ_T0005211.1 MGP_CBAJ_G0004415.1 mouse_genomes_project 7 141040353 141044170 + Gm31749 antisense antisense MGP_CBAJ_T0086119.1 MGP_CBAJ_G0032669.1 mouse_genomes_project 7 140757666 140761744 + MGP_CBAJ_P0086119 Tbx6 protein_coding protein_coding MGP_CBAJ_T0086120.1 MGP_CBAJ_G0032669.1 mouse_genomes_project 7 140757666 140761543 + MGP_CBAJ_P0086120 Tbx6 protein_coding protein_coding MGP_CBAJ_T0085009.1 MGP_CBAJ_G0032305.1 mouse_genomes_project 7 113905193 113906135 - MGP_CBAJ_P0085009 Olfr578 protein_coding protein_coding MGP_CBAJ_T0010783.1 MGP_CBAJ_G0008921.1 mouse_genomes_project 7 106254991 106255100 + Mir708 miRNA miRNA MGP_CBAJ_T0100750.1 MGP_CBAJ_G0039005.1 mouse_genomes_project 7 102751349 102751475 - Gm25860 snoRNA snoRNA MGP_CBAJ_T0084496.1 MGP_CBAJ_G0032174.1 mouse_genomes_project 7 99706778 99710597 + MGP_CBAJ_P0084496 Crebzf protein_coding protein_coding MGP_CBAJ_T0084497.1 MGP_CBAJ_G0032174.1 mouse_genomes_project 7 99706830 99712211 + MGP_CBAJ_P0084497 Crebzf protein_coding protein_coding MGP_CBAJ_T0084498.1 MGP_CBAJ_G0032174.1 mouse_genomes_project 7 99707719 99708752 + Crebzf protein_coding processed_transcript MGP_CBAJ_T0084499.1 MGP_CBAJ_G0032174.1 mouse_genomes_project 7 99707719 99708427 + MGP_CBAJ_P0084499 Crebzf protein_coding protein_coding MGP_CBAJ_T0084500.1 MGP_CBAJ_G0032174.1 mouse_genomes_project 7 99707891 99710483 + Crebzf protein_coding processed_transcript MGP_CBAJ_T0084501.1 MGP_CBAJ_G0032174.1 mouse_genomes_project 7 99708753 99710588 + Crebzf protein_coding processed_transcript MGP_CBAJ_T0002280.1 MGP_CBAJ_G0002194.1 mouse_genomes_project 7 149015800 149020289 - TEC TEC MGP_CBAJ_T0002187.1 MGP_CBAJ_G0002102.1 mouse_genomes_project 7 48233661 48233818 + TEC TEC MGP_CBAJ_T0085043.1 MGP_CBAJ_G0032338.1 mouse_genomes_project 7 114822681 114823632 + MGP_CBAJ_P0085043 protein_coding protein_coding MGP_CBAJ_T0010714.1 MGP_CBAJ_G0008852.1 mouse_genomes_project 7 9257061 9257137 - Mir297-1 miRNA miRNA MGP_CBAJ_T0081037.1 MGP_CBAJ_G0031240.1 mouse_genomes_project 7 2278422 2282432 - MGP_CBAJ_P0081037 Zfp784 protein_coding protein_coding MGP_CBAJ_T0002197.1 MGP_CBAJ_G0002112.1 mouse_genomes_project 7 61352707 61354446 - TEC TEC MGP_CBAJ_T0083734.1 MGP_CBAJ_G0031990.1 mouse_genomes_project 7 64341125 64536198 + MGP_CBAJ_P0083734 Atp10a protein_coding protein_coding MGP_CBAJ_T0081408.1 MGP_CBAJ_G0031386.1 mouse_genomes_project 7 16020866 16025543 + MGP_CBAJ_P0081408 Ccdc8 protein_coding protein_coding MGP_CBAJ_T0084340.1 MGP_CBAJ_G0032109.1 mouse_genomes_project 7 90166674 90226279 - MGP_CBAJ_P0084340 protein_coding protein_coding MGP_CBAJ_T0018092.1 MGP_CBAJ_G0015408.1 mouse_genomes_project 7 49031631 49040160 + Gm15545 processed_transcript processed_transcript MGP_CBAJ_T0018093.1 MGP_CBAJ_G0015408.1 mouse_genomes_project 7 49031658 49042875 + Gm15545 processed_transcript processed_transcript MGP_CBAJ_T0018094.1 MGP_CBAJ_G0015408.1 mouse_genomes_project 7 49031665 49039349 + Gm15545 processed_transcript processed_transcript MGP_CBAJ_T0018095.1 MGP_CBAJ_G0015408.1 mouse_genomes_project 7 49031704 49040604 + Gm15545 processed_transcript processed_transcript MGP_CBAJ_T0082654.1 MGP_CBAJ_G0031721.1 mouse_genomes_project 7 32422045 32424260 - MGP_CBAJ_P0082654 protein_coding protein_coding MGP_CBAJ_T0085349.1 MGP_CBAJ_G0032511.1 mouse_genomes_project 7 121222048 121396034 - Stk33 protein_coding processed_transcript MGP_CBAJ_T0085350.1 MGP_CBAJ_G0032511.1 mouse_genomes_project 7 121222048 121396029 - MGP_CBAJ_P0085350 Stk33 protein_coding protein_coding MGP_CBAJ_T0085351.1 MGP_CBAJ_G0032511.1 mouse_genomes_project 7 121222048 121395770 - MGP_CBAJ_P0085351 Stk33 protein_coding protein_coding MGP_CBAJ_T0085352.1 MGP_CBAJ_G0032511.1 mouse_genomes_project 7 121222048 121396034 - MGP_CBAJ_P0085352 Stk33 protein_coding protein_coding MGP_CBAJ_T0085353.1 MGP_CBAJ_G0032511.1 mouse_genomes_project 7 121222420 121395951 - MGP_CBAJ_P0085353 Stk33 protein_coding protein_coding MGP_CBAJ_T0082742.1 MGP_CBAJ_G0031736.1 mouse_genomes_project 7 32925598 32926923 + MGP_CBAJ_P0082742 Scgb1b3 protein_coding protein_coding MGP_CBAJ_T0083606.1 MGP_CBAJ_G0031964.1 mouse_genomes_project 7 53478431 53496059 - MGP_CBAJ_P0083606 Csrp3 protein_coding protein_coding MGP_CBAJ_T0083607.1 MGP_CBAJ_G0031964.1 mouse_genomes_project 7 53478431 53491679 - MGP_CBAJ_P0083607 Csrp3 protein_coding protein_coding MGP_CBAJ_T0100751.1 MGP_CBAJ_G0039006.1 mouse_genomes_project 7 107639378 107639487 + Gm24412 snoRNA snoRNA MGP_CBAJ_T0087057.1 MGP_CBAJ_G0032886.1 mouse_genomes_project 7 156868092 156870218 + Rassf7 protein_coding processed_transcript MGP_CBAJ_T0087058.1 MGP_CBAJ_G0032886.1 mouse_genomes_project 7 156868116 156869731 + Rassf7 protein_coding processed_transcript MGP_CBAJ_T0087059.1 MGP_CBAJ_G0032886.1 mouse_genomes_project 7 156868195 156869696 + MGP_CBAJ_P0087059 Rassf7 protein_coding protein_coding MGP_CBAJ_T0087060.1 MGP_CBAJ_G0032886.1 mouse_genomes_project 7 156868326 156870519 + MGP_CBAJ_P0087060 Rassf7 protein_coding unknown_likely_coding MGP_CBAJ_T0087061.1 MGP_CBAJ_G0032886.1 mouse_genomes_project 7 156868420 156869690 + MGP_CBAJ_P0087061 Rassf7 protein_coding protein_coding MGP_CBAJ_T0087062.1 MGP_CBAJ_G0032886.1 mouse_genomes_project 7 156868852 156869823 + MGP_CBAJ_P0087062 Rassf7 protein_coding protein_coding MGP_CBAJ_T0087063.1 MGP_CBAJ_G0032886.1 mouse_genomes_project 7 156868917 156869931 + MGP_CBAJ_P0087063 Rassf7 protein_coding protein_coding MGP_CBAJ_T0086644.1 MGP_CBAJ_G0032763.1 mouse_genomes_project 7 145077949 145215920 + MGP_CBAJ_P0086644 Tacc2 protein_coding unknown_likely_coding MGP_CBAJ_T0086645.1 MGP_CBAJ_G0032763.1 mouse_genomes_project 7 145107580 145311742 + MGP_CBAJ_P0086645 Tacc2 protein_coding protein_coding MGP_CBAJ_T0086646.1 MGP_CBAJ_G0032763.1 mouse_genomes_project 7 145107580 145311744 + MGP_CBAJ_P0086646 Tacc2 protein_coding protein_coding MGP_CBAJ_T0086647.1 MGP_CBAJ_G0032763.1 mouse_genomes_project 7 145237364 145311744 + MGP_CBAJ_P0086647 Tacc2 protein_coding protein_coding MGP_CBAJ_T0086648.1 MGP_CBAJ_G0032763.1 mouse_genomes_project 7 145237589 145311745 + MGP_CBAJ_P0086648 Tacc2 protein_coding unknown_likely_coding MGP_CBAJ_T0010716.1 MGP_CBAJ_G0008854.1 mouse_genomes_project 7 16776061 16776171 + Gm25068 miRNA miRNA MGP_CBAJ_T0083448.1 MGP_CBAJ_G0031917.1 mouse_genomes_project 7 49899686 49922143 - MGP_CBAJ_P0083448 Sult2b1 protein_coding unknown_likely_coding MGP_CBAJ_T0083449.1 MGP_CBAJ_G0031917.1 mouse_genomes_project 7 49899702 49953493 - MGP_CBAJ_P0083449 Sult2b1 protein_coding protein_coding MGP_CBAJ_T0083450.1 MGP_CBAJ_G0031917.1 mouse_genomes_project 7 49899719 49921876 - MGP_CBAJ_P0083450 Sult2b1 protein_coding protein_coding MGP_CBAJ_T0083451.1 MGP_CBAJ_G0031917.1 mouse_genomes_project 7 49904866 49921876 - MGP_CBAJ_P0083451 Sult2b1 protein_coding protein_coding MGP_CBAJ_T0083452.1 MGP_CBAJ_G0031917.1 mouse_genomes_project 7 49904900 49922139 - Sult2b1 protein_coding processed_transcript MGP_CBAJ_T0083453.1 MGP_CBAJ_G0031917.1 mouse_genomes_project 7 49952354 49953411 - Sult2b1 protein_coding processed_transcript MGP_CBAJ_T0081880.1 MGP_CBAJ_G0031531.1 mouse_genomes_project 7 25468352 25471074 + MGP_CBAJ_P0081880 Prr19 protein_coding protein_coding MGP_CBAJ_T0082923.1 MGP_CBAJ_G0031772.1 mouse_genomes_project 7 40721060 40730286 - MGP_CBAJ_P0082923 protein_coding unknown_likely_coding MGP_CBAJ_T0082924.1 MGP_CBAJ_G0031772.1 mouse_genomes_project 7 40721748 40722584 - protein_coding retained_intron MGP_CBAJ_T0082925.1 MGP_CBAJ_G0031772.1 mouse_genomes_project 7 40721894 40722452 - protein_coding processed_transcript MGP_CBAJ_T0082926.1 MGP_CBAJ_G0031772.1 mouse_genomes_project 7 40723733 40729993 - MGP_CBAJ_P0082926 protein_coding protein_coding MGP_CBAJ_T0082927.1 MGP_CBAJ_G0031772.1 mouse_genomes_project 7 40726246 40730596 - MGP_CBAJ_P0082927 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086255.1 MGP_CBAJ_G0032692.1 mouse_genomes_project 7 141129266 141146941 - MGP_CBAJ_P0086255 Qprt protein_coding protein_coding MGP_CBAJ_T0086256.1 MGP_CBAJ_G0032692.1 mouse_genomes_project 7 141131147 141146756 - Qprt protein_coding processed_transcript MGP_CBAJ_T0086257.1 MGP_CBAJ_G0032692.1 mouse_genomes_project 7 141140504 141146733 - Qprt protein_coding processed_transcript MGP_CBAJ_T0005054.1 MGP_CBAJ_G0004308.1 mouse_genomes_project 7 690963 695142 + Gm15929 antisense antisense MGP_CBAJ_T0018154.1 MGP_CBAJ_G0015430.1 mouse_genomes_project 7 137606612 137616401 - Gm26974 processed_transcript lincRNA MGP_CBAJ_T0018155.1 MGP_CBAJ_G0015430.1 mouse_genomes_project 7 137614031 137616015 - Gm26974 processed_transcript lincRNA MGP_CBAJ_T0018156.1 MGP_CBAJ_G0015430.1 mouse_genomes_project 7 137614033 137615519 - Gm26974 processed_transcript retained_intron MGP_CBAJ_T0085804.1 MGP_CBAJ_G0032617.1 mouse_genomes_project 7 135275022 135277798 - Cog7 protein_coding retained_intron MGP_CBAJ_T0085805.1 MGP_CBAJ_G0032617.1 mouse_genomes_project 7 135275313 135402056 - MGP_CBAJ_P0085805 Cog7 protein_coding protein_coding MGP_CBAJ_T0085807.1 MGP_CBAJ_G0032617.1 mouse_genomes_project 7 135328815 135402056 - MGP_CBAJ_P0085807 Cog7 protein_coding protein_coding MGP_CBAJ_T0085808.1 MGP_CBAJ_G0032617.1 mouse_genomes_project 7 135334853 135402039 - Cog7 protein_coding retained_intron MGP_CBAJ_T0085107.1 MGP_CBAJ_G0032379.1 mouse_genomes_project 7 115509401 115519451 - MGP_CBAJ_P0085107 Trim30c protein_coding protein_coding MGP_CBAJ_T0085300.1 MGP_CBAJ_G0032471.1 mouse_genomes_project 7 119524833 119548467 - MGP_CBAJ_P0085300 Ovch2 protein_coding protein_coding MGP_CBAJ_T0087012.1 MGP_CBAJ_G0032871.1 mouse_genomes_project 7 156558750 156560027 - MGP_CBAJ_P0087012 Ifitm5 protein_coding protein_coding MGP_CBAJ_T0086941.1 MGP_CBAJ_G0032840.1 mouse_genomes_project 7 155711201 155712259 - MGP_CBAJ_P0086941 Olfr524 protein_coding protein_coding MGP_CBAJ_T0002196.1 MGP_CBAJ_G0002111.1 mouse_genomes_project 7 60640248 60642471 + TEC TEC MGP_CBAJ_T0015608.1 MGP_CBAJ_G0013720.1 mouse_genomes_project 7 79771691 79772679 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005148.1 MGP_CBAJ_G0004373.1 mouse_genomes_project 7 85975279 85976403 + 4921513I08Rik antisense antisense MGP_CBAJ_T0015648.1 MGP_CBAJ_G0013760.1 mouse_genomes_project 7 108700022 108700773 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101372.1 MGP_CBAJ_G0039444.1 mouse_genomes_project 7 16815932 16825294 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101373.1 MGP_CBAJ_G0039444.1 mouse_genomes_project 7 16815932 16825663 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0008780.1 MGP_CBAJ_G0007082.1 mouse_genomes_project 7 70195244 70200734 + Gm20670 lincRNA lincRNA MGP_CBAJ_T0099493.1 MGP_CBAJ_G0037748.1 mouse_genomes_project 7 67967466 67967573 - Gm23431 snRNA snRNA MGP_CBAJ_T0002260.1 MGP_CBAJ_G0002174.1 mouse_genomes_project 7 135901551 135904701 + TEC TEC MGP_CBAJ_T0081603.1 MGP_CBAJ_G0031452.1 mouse_genomes_project 7 19179180 19208420 - Relb protein_coding retained_intron MGP_CBAJ_T0081604.1 MGP_CBAJ_G0031452.1 mouse_genomes_project 7 19179180 19208420 - Relb protein_coding retained_intron MGP_CBAJ_T0081605.1 MGP_CBAJ_G0031452.1 mouse_genomes_project 7 19179180 19208420 - Relb protein_coding retained_intron MGP_CBAJ_T0081606.1 MGP_CBAJ_G0031452.1 mouse_genomes_project 7 19179180 19208420 - MGP_CBAJ_P0081606 Relb protein_coding protein_coding MGP_CBAJ_T0081607.1 MGP_CBAJ_G0031452.1 mouse_genomes_project 7 19179180 19208420 - MGP_CBAJ_P0081607 Relb protein_coding protein_coding MGP_CBAJ_T0081608.1 MGP_CBAJ_G0031452.1 mouse_genomes_project 7 19179186 19208420 - MGP_CBAJ_P0081608 Relb protein_coding protein_coding MGP_CBAJ_T0081609.1 MGP_CBAJ_G0031452.1 mouse_genomes_project 7 19192249 19207766 - Relb protein_coding processed_transcript MGP_CBAJ_T0081610.1 MGP_CBAJ_G0031452.1 mouse_genomes_project 7 19193644 19207455 - Relb protein_coding processed_transcript MGP_CBAJ_T0081611.1 MGP_CBAJ_G0031452.1 mouse_genomes_project 7 19193708 19207416 - Relb protein_coding processed_transcript MGP_CBAJ_T0005176.1 MGP_CBAJ_G0004392.1 mouse_genomes_project 7 106861416 106866455 - Gm15416 antisense antisense MGP_CBAJ_T0085064.1 MGP_CBAJ_G0032359.1 mouse_genomes_project 7 115198856 115199801 - MGP_CBAJ_P0085064 Olfr640 protein_coding protein_coding MGP_CBAJ_T0084423.1 MGP_CBAJ_G0032144.1 mouse_genomes_project 7 95287695 95288688 + MGP_CBAJ_P0084423 Olfr299 protein_coding protein_coding MGP_CBAJ_T0081676.1 MGP_CBAJ_G0031476.1 mouse_genomes_project 7 23568809 23569528 + MGP_CBAJ_P0081676 Vmn1r174 protein_coding protein_coding MGP_CBAJ_T0008819.1 MGP_CBAJ_G0007112.1 mouse_genomes_project 7 80853557 80861415 + Gm44737 lincRNA lincRNA MGP_CBAJ_T0082486.1 MGP_CBAJ_G0031683.1 mouse_genomes_project 7 31717239 31719729 - MGP_CBAJ_P0082486 Sdhaf1 protein_coding protein_coding MGP_CBAJ_T0085976.1 MGP_CBAJ_G0032647.1 mouse_genomes_project 7 140297110 140304130 - MGP_CBAJ_P0085976 Spns1 protein_coding protein_coding MGP_CBAJ_T0085977.1 MGP_CBAJ_G0032647.1 mouse_genomes_project 7 140297119 140304464 - Spns1 protein_coding retained_intron MGP_CBAJ_T0085978.1 MGP_CBAJ_G0032647.1 mouse_genomes_project 7 140297119 140304464 - MGP_CBAJ_P0085978 Spns1 protein_coding protein_coding MGP_CBAJ_T0085979.1 MGP_CBAJ_G0032647.1 mouse_genomes_project 7 140297119 140304464 - MGP_CBAJ_P0085979 Spns1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085980.1 MGP_CBAJ_G0032647.1 mouse_genomes_project 7 140297787 140304082 - MGP_CBAJ_P0085980 Spns1 protein_coding protein_coding MGP_CBAJ_T0085981.1 MGP_CBAJ_G0032647.1 mouse_genomes_project 7 140298272 140299972 - Spns1 protein_coding retained_intron MGP_CBAJ_T0085982.1 MGP_CBAJ_G0032647.1 mouse_genomes_project 7 140298632 140304148 - MGP_CBAJ_P0085982 Spns1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085983.1 MGP_CBAJ_G0032647.1 mouse_genomes_project 7 140298916 140299615 - Spns1 protein_coding retained_intron MGP_CBAJ_T0085984.1 MGP_CBAJ_G0032647.1 mouse_genomes_project 7 140299797 140304260 - MGP_CBAJ_P0085984 Spns1 protein_coding protein_coding MGP_CBAJ_T0085985.1 MGP_CBAJ_G0032647.1 mouse_genomes_project 7 140300712 140301416 - Spns1 protein_coding retained_intron MGP_CBAJ_T0085986.1 MGP_CBAJ_G0032647.1 mouse_genomes_project 7 140301328 140303781 - Spns1 protein_coding processed_transcript MGP_CBAJ_T0085987.1 MGP_CBAJ_G0032647.1 mouse_genomes_project 7 140303750 140304474 - Spns1 protein_coding processed_transcript MGP_CBAJ_T0102125.1 MGP_CBAJ_G0040154.1 mouse_genomes_project 7 41964884 41973241 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085375.1 MGP_CBAJ_G0032518.1 mouse_genomes_project 7 121745393 121761742 - MGP_CBAJ_P0085375 Tmem9b protein_coding protein_coding MGP_CBAJ_T0085376.1 MGP_CBAJ_G0032518.1 mouse_genomes_project 7 121754917 121761810 - MGP_CBAJ_P0085376 Tmem9b protein_coding protein_coding MGP_CBAJ_T0087150.1 MGP_CBAJ_G0032899.1 mouse_genomes_project 7 157142451 157148374 - Pidd1 protein_coding retained_intron MGP_CBAJ_T0087151.1 MGP_CBAJ_G0032899.1 mouse_genomes_project 7 157142451 157147738 - MGP_CBAJ_P0087151 Pidd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087152.1 MGP_CBAJ_G0032899.1 mouse_genomes_project 7 157142451 157147735 - MGP_CBAJ_P0087152 Pidd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087153.1 MGP_CBAJ_G0032899.1 mouse_genomes_project 7 157142451 157148407 - MGP_CBAJ_P0087153 Pidd1 protein_coding protein_coding MGP_CBAJ_T0087154.1 MGP_CBAJ_G0032899.1 mouse_genomes_project 7 157142455 157148390 - Pidd1 protein_coding retained_intron MGP_CBAJ_T0087155.1 MGP_CBAJ_G0032899.1 mouse_genomes_project 7 157142463 157147738 - Pidd1 protein_coding retained_intron MGP_CBAJ_T0087156.1 MGP_CBAJ_G0032899.1 mouse_genomes_project 7 157142853 157147737 - MGP_CBAJ_P0087156 Pidd1 protein_coding protein_coding MGP_CBAJ_T0087157.1 MGP_CBAJ_G0032899.1 mouse_genomes_project 7 157142863 157147702 - MGP_CBAJ_P0087157 Pidd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087158.1 MGP_CBAJ_G0032899.1 mouse_genomes_project 7 157142868 157147702 - Pidd1 protein_coding retained_intron MGP_CBAJ_T0087159.1 MGP_CBAJ_G0032899.1 mouse_genomes_project 7 157143837 157144506 - Pidd1 protein_coding retained_intron MGP_CBAJ_T0087160.1 MGP_CBAJ_G0032899.1 mouse_genomes_project 7 157145431 157146671 - Pidd1 protein_coding retained_intron MGP_CBAJ_T0087161.1 MGP_CBAJ_G0032899.1 mouse_genomes_project 7 157146547 157148376 - Pidd1 protein_coding processed_transcript MGP_CBAJ_T0097839.1 MGP_CBAJ_G0036112.1 mouse_genomes_project 7 125292090 125293517 + pseudogene pseudogene MGP_CBAJ_T0010757.1 MGP_CBAJ_G0008895.1 mouse_genomes_project 7 67567906 67567986 - Gm23490 miRNA miRNA MGP_CBAJ_T0008825.1 MGP_CBAJ_G0007117.1 mouse_genomes_project 7 82103893 82109151 + Gm30459 lincRNA lincRNA MGP_CBAJ_T0081054.1 MGP_CBAJ_G0031250.1 mouse_genomes_project 7 2622767 2631791 + MGP_CBAJ_P0081054 Gm5065 protein_coding protein_coding MGP_CBAJ_T0083491.1 MGP_CBAJ_G0031927.1 mouse_genomes_project 7 50139986 50148145 + MGP_CBAJ_P0083491 Ccdc114 protein_coding protein_coding MGP_CBAJ_T0083492.1 MGP_CBAJ_G0031927.1 mouse_genomes_project 7 50140130 50140982 + Ccdc114 protein_coding retained_intron MGP_CBAJ_T0083493.1 MGP_CBAJ_G0031927.1 mouse_genomes_project 7 50140157 50148151 + MGP_CBAJ_P0083493 Ccdc114 protein_coding protein_coding MGP_CBAJ_T0083494.1 MGP_CBAJ_G0031927.1 mouse_genomes_project 7 50140157 50156324 + MGP_CBAJ_P0083494 Ccdc114 protein_coding protein_coding MGP_CBAJ_T0083495.1 MGP_CBAJ_G0031927.1 mouse_genomes_project 7 50140434 50168269 + MGP_CBAJ_P0083495 Ccdc114 protein_coding protein_coding MGP_CBAJ_T0102136.1 MGP_CBAJ_G0040165.1 mouse_genomes_project 7 47915484 47918780 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0083727.1 MGP_CBAJ_G0031988.1 mouse_genomes_project 7 62963955 63073794 - MGP_CBAJ_P0083727 Gabra5 protein_coding unknown_likely_coding MGP_CBAJ_T0102072.1 MGP_CBAJ_G0040102.1 mouse_genomes_project 7 11418264 11418465 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099530.1 MGP_CBAJ_G0037785.1 mouse_genomes_project 7 153397172 153397279 - Gm25798 snRNA snRNA MGP_CBAJ_T0084430.1 MGP_CBAJ_G0032150.1 mouse_genomes_project 7 95567311 95568290 + MGP_CBAJ_P0084430 Olfr292 protein_coding protein_coding MGP_CBAJ_T0008701.1 MGP_CBAJ_G0007018.1 mouse_genomes_project 7 15872415 15875984 - 9330104G04Rik lincRNA lincRNA MGP_CBAJ_T0008702.1 MGP_CBAJ_G0007018.1 mouse_genomes_project 7 15874051 15875984 - 9330104G04Rik lincRNA lincRNA MGP_CBAJ_T0080969.1 MGP_CBAJ_G0031218.1 mouse_genomes_project 7 1930136 1940056 + MGP_CBAJ_P0080969 Suv420h2 protein_coding protein_coding MGP_CBAJ_T0080970.1 MGP_CBAJ_G0031218.1 mouse_genomes_project 7 1930174 1932110 + Suv420h2 protein_coding retained_intron MGP_CBAJ_T0080971.1 MGP_CBAJ_G0031218.1 mouse_genomes_project 7 1930177 1933075 + MGP_CBAJ_P0080971 Suv420h2 protein_coding protein_coding MGP_CBAJ_T0080972.1 MGP_CBAJ_G0031218.1 mouse_genomes_project 7 1930188 1940056 + MGP_CBAJ_P0080972 Suv420h2 protein_coding protein_coding MGP_CBAJ_T0080973.1 MGP_CBAJ_G0031218.1 mouse_genomes_project 7 1930206 1940056 + MGP_CBAJ_P0080973 Suv420h2 protein_coding protein_coding MGP_CBAJ_T0080974.1 MGP_CBAJ_G0031218.1 mouse_genomes_project 7 1931656 1932559 + Suv420h2 protein_coding retained_intron MGP_CBAJ_T0080975.1 MGP_CBAJ_G0031218.1 mouse_genomes_project 7 1931871 1939440 + MGP_CBAJ_P0080975 Suv420h2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080976.1 MGP_CBAJ_G0031218.1 mouse_genomes_project 7 1932345 1938450 + Suv420h2 protein_coding retained_intron MGP_CBAJ_T0080977.1 MGP_CBAJ_G0031218.1 mouse_genomes_project 7 1932475 1933502 + Suv420h2 protein_coding retained_intron MGP_CBAJ_T0080978.1 MGP_CBAJ_G0031218.1 mouse_genomes_project 7 1932678 1933626 + Suv420h2 protein_coding retained_intron MGP_CBAJ_T0080979.1 MGP_CBAJ_G0031218.1 mouse_genomes_project 7 1932765 1938663 + Suv420h2 protein_coding retained_intron MGP_CBAJ_T0080980.1 MGP_CBAJ_G0031218.1 mouse_genomes_project 7 1938349 1939138 + MGP_CBAJ_P0080980 Suv420h2 protein_coding protein_coding MGP_CBAJ_T0085229.1 MGP_CBAJ_G0032431.1 mouse_genomes_project 7 117139030 117145362 + MGP_CBAJ_P0085229 Ilk protein_coding protein_coding MGP_CBAJ_T0085230.1 MGP_CBAJ_G0032431.1 mouse_genomes_project 7 117139109 117145355 + Ilk protein_coding retained_intron MGP_CBAJ_T0085231.1 MGP_CBAJ_G0032431.1 mouse_genomes_project 7 117139163 117145362 + MGP_CBAJ_P0085231 Ilk protein_coding protein_coding MGP_CBAJ_T0085232.1 MGP_CBAJ_G0032431.1 mouse_genomes_project 7 117139171 117143480 + MGP_CBAJ_P0085232 Ilk protein_coding protein_coding MGP_CBAJ_T0085233.1 MGP_CBAJ_G0032431.1 mouse_genomes_project 7 117139539 117143798 + Ilk protein_coding retained_intron MGP_CBAJ_T0085234.1 MGP_CBAJ_G0032431.1 mouse_genomes_project 7 117139561 117143912 + Ilk protein_coding retained_intron MGP_CBAJ_T0085236.1 MGP_CBAJ_G0032431.1 mouse_genomes_project 7 117142624 117144201 + Ilk protein_coding retained_intron MGP_CBAJ_T0085237.1 MGP_CBAJ_G0032431.1 mouse_genomes_project 7 117142947 117143611 + Ilk protein_coding retained_intron MGP_CBAJ_T0085238.1 MGP_CBAJ_G0032431.1 mouse_genomes_project 7 117142947 117144345 + MGP_CBAJ_P0085238 Ilk protein_coding protein_coding MGP_CBAJ_T0085239.1 MGP_CBAJ_G0032431.1 mouse_genomes_project 7 117143408 117144347 + Ilk protein_coding retained_intron MGP_CBAJ_T0085240.1 MGP_CBAJ_G0032431.1 mouse_genomes_project 7 117143618 117144533 + Ilk protein_coding retained_intron MGP_CBAJ_T0085241.1 MGP_CBAJ_G0032431.1 mouse_genomes_project 7 117144019 117145213 + Ilk protein_coding retained_intron MGP_CBAJ_T0085242.1 MGP_CBAJ_G0032431.1 mouse_genomes_project 7 117144217 117145094 + Ilk protein_coding processed_transcript MGP_CBAJ_T0082232.1 MGP_CBAJ_G0031626.1 mouse_genomes_project 7 29740216 29740643 - Mrps12 protein_coding processed_transcript MGP_CBAJ_T0082233.1 MGP_CBAJ_G0031626.1 mouse_genomes_project 7 29740216 29746335 - MGP_CBAJ_P0082233 Mrps12 protein_coding protein_coding MGP_CBAJ_T0082234.1 MGP_CBAJ_G0031626.1 mouse_genomes_project 7 29740217 29746385 - MGP_CBAJ_P0082234 Mrps12 protein_coding protein_coding MGP_CBAJ_T0082235.1 MGP_CBAJ_G0031626.1 mouse_genomes_project 7 29740467 29742703 - MGP_CBAJ_P0082235 Mrps12 protein_coding protein_coding MGP_CBAJ_T0085471.1 MGP_CBAJ_G0032539.1 mouse_genomes_project 7 124490753 124635184 + MGP_CBAJ_P0085471 Mical2 protein_coding protein_coding MGP_CBAJ_T0085472.1 MGP_CBAJ_G0032539.1 mouse_genomes_project 7 124490787 124628435 + MGP_CBAJ_P0085472 Mical2 protein_coding protein_coding MGP_CBAJ_T0085473.1 MGP_CBAJ_G0032539.1 mouse_genomes_project 7 124490787 124591831 + MGP_CBAJ_P0085473 Mical2 protein_coding protein_coding MGP_CBAJ_T0085474.1 MGP_CBAJ_G0032539.1 mouse_genomes_project 7 124538742 124633965 + MGP_CBAJ_P0085474 Mical2 protein_coding protein_coding MGP_CBAJ_T0085475.1 MGP_CBAJ_G0032539.1 mouse_genomes_project 7 124592444 124627637 + Mical2 protein_coding retained_intron MGP_CBAJ_T0085476.1 MGP_CBAJ_G0032539.1 mouse_genomes_project 7 124626874 124635184 + MGP_CBAJ_P0085476 Mical2 protein_coding protein_coding MGP_CBAJ_T0085073.1 MGP_CBAJ_G0032368.1 mouse_genomes_project 7 115334499 115336797 - MGP_CBAJ_P0085073 Ubqlnl protein_coding protein_coding MGP_CBAJ_T0085284.1 MGP_CBAJ_G0032462.1 mouse_genomes_project 7 118812591 118813539 - MGP_CBAJ_P0085284 protein_coding protein_coding MGP_CBAJ_T0002232.1 MGP_CBAJ_G0002146.1 mouse_genomes_project 7 86545845 86546922 - TEC TEC MGP_CBAJ_T0002227.1 MGP_CBAJ_G0002141.1 mouse_genomes_project 7 83526065 83528709 + TEC TEC MGP_CBAJ_T0086028.1 MGP_CBAJ_G0032656.1 mouse_genomes_project 7 140490443 140510331 - MGP_CBAJ_P0086028 Eif3c protein_coding protein_coding MGP_CBAJ_T0086029.1 MGP_CBAJ_G0032656.1 mouse_genomes_project 7 140506567 140510278 - MGP_CBAJ_P0086029 Eif3c protein_coding protein_coding MGP_CBAJ_T0086030.1 MGP_CBAJ_G0032656.1 mouse_genomes_project 7 140506982 140510124 - MGP_CBAJ_P0086030 Eif3c protein_coding nonsense_mediated_decay MGP_CBAJ_T0086608.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144645814 144759805 - MGP_CBAJ_P0086608 Fgfr2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086609.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144645814 144759805 - MGP_CBAJ_P0086609 Fgfr2 protein_coding protein_coding MGP_CBAJ_T0086610.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144646910 144651187 - Fgfr2 protein_coding retained_intron MGP_CBAJ_T0086611.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144647011 144759751 - MGP_CBAJ_P0086611 Fgfr2 protein_coding protein_coding MGP_CBAJ_T0086612.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144647011 144759823 - MGP_CBAJ_P0086612 Fgfr2 protein_coding protein_coding MGP_CBAJ_T0086613.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144647110 144655267 - Fgfr2 protein_coding retained_intron MGP_CBAJ_T0086614.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144647261 144755417 - MGP_CBAJ_P0086614 Fgfr2 protein_coding protein_coding MGP_CBAJ_T0086615.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144647261 144755417 - MGP_CBAJ_P0086615 Fgfr2 protein_coding protein_coding MGP_CBAJ_T0086616.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144647261 144755417 - MGP_CBAJ_P0086616 Fgfr2 protein_coding protein_coding MGP_CBAJ_T0086617.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144647261 144755417 - MGP_CBAJ_P0086617 Fgfr2 protein_coding protein_coding MGP_CBAJ_T0086618.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144647261 144755417 - MGP_CBAJ_P0086618 Fgfr2 protein_coding protein_coding MGP_CBAJ_T0086619.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144647261 144755417 - MGP_CBAJ_P0086619 Fgfr2 protein_coding protein_coding MGP_CBAJ_T0086620.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144647261 144755417 - MGP_CBAJ_P0086620 Fgfr2 protein_coding protein_coding MGP_CBAJ_T0086621.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144647261 144755417 - MGP_CBAJ_P0086621 Fgfr2 protein_coding protein_coding MGP_CBAJ_T0086622.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144647261 144755417 - MGP_CBAJ_P0086622 Fgfr2 protein_coding protein_coding MGP_CBAJ_T0086623.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144647261 144755417 - MGP_CBAJ_P0086623 Fgfr2 protein_coding protein_coding MGP_CBAJ_T0086624.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144647261 144755417 - MGP_CBAJ_P0086624 Fgfr2 protein_coding protein_coding MGP_CBAJ_T0086625.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144647261 144755417 - MGP_CBAJ_P0086625 Fgfr2 protein_coding protein_coding MGP_CBAJ_T0086626.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144647261 144755417 - MGP_CBAJ_P0086626 Fgfr2 protein_coding protein_coding MGP_CBAJ_T0086627.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144653046 144661416 - Fgfr2 protein_coding retained_intron MGP_CBAJ_T0086628.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144661131 144669182 - Fgfr2 protein_coding retained_intron MGP_CBAJ_T0086629.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144666874 144683088 - Fgfr2 protein_coding retained_intron MGP_CBAJ_T0086630.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144671314 144682600 - Fgfr2 protein_coding retained_intron MGP_CBAJ_T0086631.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144688090 144719511 - MGP_CBAJ_P0086631 Fgfr2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086632.1 MGP_CBAJ_G0032760.1 mouse_genomes_project 7 144734595 144757535 - Fgfr2 protein_coding retained_intron MGP_CBAJ_T0085740.1 MGP_CBAJ_G0032596.1 mouse_genomes_project 7 133353198 133362966 + MGP_CBAJ_P0085740 Anks4b protein_coding protein_coding MGP_CBAJ_T0015481.1 MGP_CBAJ_G0013593.1 mouse_genomes_project 7 12070524 12072119 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0085136.1 MGP_CBAJ_G0032403.1 mouse_genomes_project 7 116197757 116198696 - MGP_CBAJ_P0085136 Olfr672 protein_coding protein_coding MGP_CBAJ_T0085051.1 MGP_CBAJ_G0032346.1 mouse_genomes_project 7 114966509 114967757 - MGP_CBAJ_P0085051 Hbb-bh2 protein_coding protein_coding MGP_CBAJ_T0085717.1 MGP_CBAJ_G0032590.1 mouse_genomes_project 7 132917992 132973850 + MGP_CBAJ_P0085717 2610020H08Rik protein_coding protein_coding MGP_CBAJ_T0085718.1 MGP_CBAJ_G0032590.1 mouse_genomes_project 7 132917996 132973850 + MGP_CBAJ_P0085718 2610020H08Rik protein_coding protein_coding MGP_CBAJ_T0085719.1 MGP_CBAJ_G0032590.1 mouse_genomes_project 7 132918137 132943065 + 2610020H08Rik protein_coding retained_intron MGP_CBAJ_T0085720.1 MGP_CBAJ_G0032590.1 mouse_genomes_project 7 132918366 132973720 + MGP_CBAJ_P0085720 2610020H08Rik protein_coding protein_coding MGP_CBAJ_T0085721.1 MGP_CBAJ_G0032590.1 mouse_genomes_project 7 132946313 132955057 + 2610020H08Rik protein_coding processed_transcript MGP_CBAJ_T0085722.1 MGP_CBAJ_G0032590.1 mouse_genomes_project 7 132947829 132950289 + 2610020H08Rik protein_coding retained_intron MGP_CBAJ_T0085723.1 MGP_CBAJ_G0032590.1 mouse_genomes_project 7 132957373 132968946 + 2610020H08Rik protein_coding processed_transcript MGP_CBAJ_T0085724.1 MGP_CBAJ_G0032590.1 mouse_genomes_project 7 132969112 132970343 + 2610020H08Rik protein_coding retained_intron MGP_CBAJ_T0083496.1 MGP_CBAJ_G0031928.1 mouse_genomes_project 7 50197514 50272689 - MGP_CBAJ_P0083496 Abcc6 protein_coding protein_coding MGP_CBAJ_T0083497.1 MGP_CBAJ_G0031928.1 mouse_genomes_project 7 50198030 50198821 - Abcc6 protein_coding retained_intron MGP_CBAJ_T0083498.1 MGP_CBAJ_G0031928.1 mouse_genomes_project 7 50228439 50232832 - Abcc6 protein_coding retained_intron MGP_CBAJ_T0085519.1 MGP_CBAJ_G0032548.1 mouse_genomes_project 7 126144675 126145161 - MGP_CBAJ_P0085519 protein_coding protein_coding MGP_CBAJ_T0099492.1 MGP_CBAJ_G0037747.1 mouse_genomes_project 7 61089959 61090021 + Gm26482 snRNA snRNA MGP_CBAJ_T0085032.1 MGP_CBAJ_G0032327.1 mouse_genomes_project 7 114549678 114550626 - MGP_CBAJ_P0085032 Olfr610 protein_coding protein_coding MGP_CBAJ_T0018170.1 MGP_CBAJ_G0015439.1 mouse_genomes_project 7 149145830 149151426 - processed_transcript sense_intronic MGP_CBAJ_T0018171.1 MGP_CBAJ_G0015439.1 mouse_genomes_project 7 149145909 149150041 - processed_transcript retained_intron MGP_CBAJ_T0086482.1 MGP_CBAJ_G0032738.1 mouse_genomes_project 7 142185719 142206584 + MGP_CBAJ_P0086482 Fus protein_coding protein_coding MGP_CBAJ_T0086483.1 MGP_CBAJ_G0032738.1 mouse_genomes_project 7 142185752 142202915 + MGP_CBAJ_P0086483 Fus protein_coding protein_coding MGP_CBAJ_T0086484.1 MGP_CBAJ_G0032738.1 mouse_genomes_project 7 142185753 142195426 + Fus protein_coding retained_intron MGP_CBAJ_T0086485.1 MGP_CBAJ_G0032738.1 mouse_genomes_project 7 142185753 142193312 + Fus protein_coding processed_transcript MGP_CBAJ_T0086486.1 MGP_CBAJ_G0032738.1 mouse_genomes_project 7 142185753 142202912 + Fus protein_coding retained_intron MGP_CBAJ_T0086487.1 MGP_CBAJ_G0032738.1 mouse_genomes_project 7 142185770 142202915 + MGP_CBAJ_P0086487 Fus protein_coding protein_coding MGP_CBAJ_T0086488.1 MGP_CBAJ_G0032738.1 mouse_genomes_project 7 142192886 142195426 + Fus protein_coding retained_intron MGP_CBAJ_T0086489.1 MGP_CBAJ_G0032738.1 mouse_genomes_project 7 142192973 142198370 + Fus protein_coding processed_transcript MGP_CBAJ_T0086490.1 MGP_CBAJ_G0032738.1 mouse_genomes_project 7 142195241 142199110 + Fus protein_coding retained_intron MGP_CBAJ_T0086491.1 MGP_CBAJ_G0032738.1 mouse_genomes_project 7 142196073 142197932 + Fus protein_coding retained_intron MGP_CBAJ_T0086492.1 MGP_CBAJ_G0032738.1 mouse_genomes_project 7 142196782 142201119 + Fus protein_coding retained_intron MGP_CBAJ_T0086493.1 MGP_CBAJ_G0032738.1 mouse_genomes_project 7 142198282 142202442 + MGP_CBAJ_P0086493 Fus protein_coding protein_coding MGP_CBAJ_T0086494.1 MGP_CBAJ_G0032738.1 mouse_genomes_project 7 142198412 142202332 + MGP_CBAJ_P0086494 Fus protein_coding protein_coding MGP_CBAJ_T0086495.1 MGP_CBAJ_G0032738.1 mouse_genomes_project 7 142199015 142201069 + Fus protein_coding retained_intron MGP_CBAJ_T0086496.1 MGP_CBAJ_G0032738.1 mouse_genomes_project 7 142201098 142202712 + Fus protein_coding retained_intron MGP_CBAJ_T0086497.1 MGP_CBAJ_G0032738.1 mouse_genomes_project 7 142203961 142206584 + MGP_CBAJ_P0086497 Fus protein_coding protein_coding MGP_CBAJ_T0010799.1 MGP_CBAJ_G0008937.1 mouse_genomes_project 7 141615262 141615353 + miRNA miRNA MGP_CBAJ_T0081137.1 MGP_CBAJ_G0031296.1 mouse_genomes_project 7 10254100 10255027 + MGP_CBAJ_P0081137 Vmn1r80 protein_coding protein_coding MGP_CBAJ_T0082441.1 MGP_CBAJ_G0031677.1 mouse_genomes_project 7 31613884 31616171 - MGP_CBAJ_P0082441 Ovol3 protein_coding protein_coding MGP_CBAJ_T0084518.1 MGP_CBAJ_G0032178.1 mouse_genomes_project 7 102116213 102201067 - MGP_CBAJ_P0084518 Ankrd42 protein_coding protein_coding MGP_CBAJ_T0084519.1 MGP_CBAJ_G0032178.1 mouse_genomes_project 7 102118673 102201107 - MGP_CBAJ_P0084519 Ankrd42 protein_coding protein_coding MGP_CBAJ_T0084520.1 MGP_CBAJ_G0032178.1 mouse_genomes_project 7 102118689 102201101 - MGP_CBAJ_P0084520 Ankrd42 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084522.1 MGP_CBAJ_G0032178.1 mouse_genomes_project 7 102161488 102169378 - Ankrd42 protein_coding retained_intron MGP_CBAJ_T0084523.1 MGP_CBAJ_G0032178.1 mouse_genomes_project 7 102168180 102201000 - Ankrd42 protein_coding retained_intron MGP_CBAJ_T0084524.1 MGP_CBAJ_G0032178.1 mouse_genomes_project 7 102168432 102201095 - Ankrd42 protein_coding processed_transcript MGP_CBAJ_T0082950.1 MGP_CBAJ_G0031779.1 mouse_genomes_project 7 44557959 44562398 - MGP_CBAJ_P0082950 protein_coding protein_coding MGP_CBAJ_T0086313.1 MGP_CBAJ_G0032707.1 mouse_genomes_project 7 141488201 141491980 - MGP_CBAJ_P0086313 E430018J23Rik protein_coding protein_coding MGP_CBAJ_T0080746.1 MGP_CBAJ_G0031176.1 mouse_genomes_project 7 83828 98710 - AU018091 protein_coding processed_transcript MGP_CBAJ_T0080747.1 MGP_CBAJ_G0031176.1 mouse_genomes_project 7 83828 105596 - MGP_CBAJ_P0080747 AU018091 protein_coding protein_coding MGP_CBAJ_T0080748.1 MGP_CBAJ_G0031176.1 mouse_genomes_project 7 96555 105501 - MGP_CBAJ_P0080748 AU018091 protein_coding protein_coding MGP_CBAJ_T0018138.1 MGP_CBAJ_G0015421.1 mouse_genomes_project 7 89229448 89240684 + processed_transcript processed_transcript MGP_CBAJ_T0002228.1 MGP_CBAJ_G0002142.1 mouse_genomes_project 7 84146420 84147371 + TEC TEC MGP_CBAJ_T0015592.1 MGP_CBAJ_G0013704.1 mouse_genomes_project 7 62262536 62263548 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005136.1 MGP_CBAJ_G0004364.1 mouse_genomes_project 7 55330869 55381725 - Nell1os antisense antisense MGP_CBAJ_T0005137.1 MGP_CBAJ_G0004364.1 mouse_genomes_project 7 55354516 55381812 - Nell1os antisense antisense MGP_CBAJ_T0005138.1 MGP_CBAJ_G0004364.1 mouse_genomes_project 7 55370559 55380559 - Nell1os antisense antisense MGP_CBAJ_T0081545.1 MGP_CBAJ_G0031435.1 mouse_genomes_project 7 18832951 18840273 - MGP_CBAJ_P0081545 Fosb protein_coding protein_coding MGP_CBAJ_T0099479.1 MGP_CBAJ_G0037734.1 mouse_genomes_project 7 18081546 18081653 - Gm24464 snRNA snRNA MGP_CBAJ_T0081970.1 MGP_CBAJ_G0031552.1 mouse_genomes_project 7 26203270 26384808 + MGP_CBAJ_P0081970 protein_coding protein_coding MGP_CBAJ_T0008692.1 MGP_CBAJ_G0007010.1 mouse_genomes_project 7 448044 449807 - 3300002P13Rik lincRNA lincRNA MGP_CBAJ_T0082236.1 MGP_CBAJ_G0031627.1 mouse_genomes_project 7 29746532 29761032 + MGP_CBAJ_P0082236 Sars2 protein_coding protein_coding MGP_CBAJ_T0083757.1 MGP_CBAJ_G0031995.1 mouse_genomes_project 7 65747534 65747947 + MGP_CBAJ_P0083757 protein_coding protein_coding MGP_CBAJ_T0083422.1 MGP_CBAJ_G0031908.1 mouse_genomes_project 7 49805559 49828943 - MGP_CBAJ_P0083422 Fut2 protein_coding protein_coding MGP_CBAJ_T0086184.1 MGP_CBAJ_G0032677.1 mouse_genomes_project 7 140861296 140864520 - MGP_CBAJ_P0086184 Taok2 protein_coding unknown_likely_coding MGP_CBAJ_T0086185.1 MGP_CBAJ_G0032677.1 mouse_genomes_project 7 140861299 140880323 - MGP_CBAJ_P0086185 Taok2 protein_coding protein_coding MGP_CBAJ_T0086186.1 MGP_CBAJ_G0032677.1 mouse_genomes_project 7 140862128 140862878 - Taok2 protein_coding retained_intron MGP_CBAJ_T0086187.1 MGP_CBAJ_G0032677.1 mouse_genomes_project 7 140865124 140880323 - MGP_CBAJ_P0086187 Taok2 protein_coding protein_coding MGP_CBAJ_T0086188.1 MGP_CBAJ_G0032677.1 mouse_genomes_project 7 140875416 140878579 - Taok2 protein_coding retained_intron MGP_CBAJ_T0008862.1 MGP_CBAJ_G0007136.1 mouse_genomes_project 7 102203749 102211247 + Gm26944 lincRNA lincRNA MGP_CBAJ_T0083505.1 MGP_CBAJ_G0031931.1 mouse_genomes_project 7 50358818 50442913 - MGP_CBAJ_P0083505 Abcc8 protein_coding protein_coding MGP_CBAJ_T0083506.1 MGP_CBAJ_G0031931.1 mouse_genomes_project 7 50358819 50442796 - MGP_CBAJ_P0083506 Abcc8 protein_coding unknown_likely_coding MGP_CBAJ_T0008724.1 MGP_CBAJ_G0007038.1 mouse_genomes_project 7 32407836 32432893 + Gm44662 lincRNA lincRNA MGP_CBAJ_T0005164.1 MGP_CBAJ_G0004384.1 mouse_genomes_project 7 91095594 91107899 - 4933406J10Rik antisense antisense MGP_CBAJ_T0081094.1 MGP_CBAJ_G0031265.1 mouse_genomes_project 7 3850123 3851184 + MGP_CBAJ_P0081094 Olfr1344 protein_coding protein_coding MGP_CBAJ_T0086314.1 MGP_CBAJ_G0032708.1 mouse_genomes_project 7 141535080 141538141 - Zfp688 protein_coding retained_intron MGP_CBAJ_T0086315.1 MGP_CBAJ_G0032708.1 mouse_genomes_project 7 141535080 141538153 - MGP_CBAJ_P0086315 Zfp688 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086316.1 MGP_CBAJ_G0032708.1 mouse_genomes_project 7 141535080 141538148 - MGP_CBAJ_P0086316 Zfp688 protein_coding protein_coding MGP_CBAJ_T0086317.1 MGP_CBAJ_G0032708.1 mouse_genomes_project 7 141535082 141538182 - Zfp688 protein_coding retained_intron MGP_CBAJ_T0086318.1 MGP_CBAJ_G0032708.1 mouse_genomes_project 7 141535459 141537964 - MGP_CBAJ_P0086318 Zfp688 protein_coding protein_coding MGP_CBAJ_T0086319.1 MGP_CBAJ_G0032708.1 mouse_genomes_project 7 141535704 141538081 - MGP_CBAJ_P0086319 Zfp688 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081593.1 MGP_CBAJ_G0031447.1 mouse_genomes_project 7 19073834 19080162 + MGP_CBAJ_P0081593 Nkpd1 protein_coding protein_coding MGP_CBAJ_T0082029.1 MGP_CBAJ_G0031573.1 mouse_genomes_project 7 27838890 27865432 + MGP_CBAJ_P0082029 BC024978 protein_coding protein_coding MGP_CBAJ_T0082030.1 MGP_CBAJ_G0031573.1 mouse_genomes_project 7 27838890 27859556 + MGP_CBAJ_P0082030 BC024978 protein_coding protein_coding MGP_CBAJ_T0082031.1 MGP_CBAJ_G0031573.1 mouse_genomes_project 7 27840232 27859397 + MGP_CBAJ_P0082031 BC024978 protein_coding protein_coding MGP_CBAJ_T0082032.1 MGP_CBAJ_G0031573.1 mouse_genomes_project 7 27857867 27859556 + MGP_CBAJ_P0082032 BC024978 protein_coding protein_coding MGP_CBAJ_T0102120.1 MGP_CBAJ_G0040149.1 mouse_genomes_project 7 35933952 35942402 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0086957.1 MGP_CBAJ_G0032854.1 mouse_genomes_project 7 156212466 156218934 + MGP_CBAJ_P0086957 Olfr53 protein_coding protein_coding MGP_CBAJ_T0082308.1 MGP_CBAJ_G0031642.1 mouse_genomes_project 7 30297661 30301361 - MGP_CBAJ_P0082308 Fam98c protein_coding protein_coding MGP_CBAJ_T0082309.1 MGP_CBAJ_G0031642.1 mouse_genomes_project 7 30297662 30301334 - Fam98c protein_coding retained_intron MGP_CBAJ_T0082310.1 MGP_CBAJ_G0031642.1 mouse_genomes_project 7 30297662 30301354 - Fam98c protein_coding retained_intron MGP_CBAJ_T0082311.1 MGP_CBAJ_G0031642.1 mouse_genomes_project 7 30297662 30301334 - Fam98c protein_coding retained_intron MGP_CBAJ_T0082312.1 MGP_CBAJ_G0031642.1 mouse_genomes_project 7 30297662 30301334 - MGP_CBAJ_P0082312 Fam98c protein_coding protein_coding MGP_CBAJ_T0082313.1 MGP_CBAJ_G0031642.1 mouse_genomes_project 7 30297669 30301311 - MGP_CBAJ_P0082313 Fam98c protein_coding protein_coding MGP_CBAJ_T0082314.1 MGP_CBAJ_G0031642.1 mouse_genomes_project 7 30297704 30300870 - MGP_CBAJ_P0082314 Fam98c protein_coding protein_coding MGP_CBAJ_T0082315.1 MGP_CBAJ_G0031642.1 mouse_genomes_project 7 30298543 30301385 - MGP_CBAJ_P0082315 Fam98c protein_coding protein_coding MGP_CBAJ_T0082316.1 MGP_CBAJ_G0031642.1 mouse_genomes_project 7 30298574 30300754 - MGP_CBAJ_P0082316 Fam98c protein_coding protein_coding MGP_CBAJ_T0082317.1 MGP_CBAJ_G0031642.1 mouse_genomes_project 7 30298657 30301354 - Fam98c protein_coding processed_transcript MGP_CBAJ_T0080886.1 MGP_CBAJ_G0031204.1 mouse_genomes_project 7 1515479 1545169 - MGP_CBAJ_P0080886 Gp6 protein_coding protein_coding MGP_CBAJ_T0080887.1 MGP_CBAJ_G0031204.1 mouse_genomes_project 7 1523267 1545153 - MGP_CBAJ_P0080887 Gp6 protein_coding protein_coding MGP_CBAJ_T0015618.1 MGP_CBAJ_G0013730.1 mouse_genomes_project 7 84941139 84941642 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0085038.1 MGP_CBAJ_G0032333.1 mouse_genomes_project 7 114672541 114673131 - MGP_CBAJ_P0085038 protein_coding protein_coding MGP_CBAJ_T0083949.1 MGP_CBAJ_G0032036.1 mouse_genomes_project 7 78226677 78230340 - MGP_CBAJ_P0083949 Gm10295 protein_coding protein_coding MGP_CBAJ_T0008909.1 MGP_CBAJ_G0007167.1 mouse_genomes_project 7 139073316 139127382 - 4933440M02Rik lincRNA lincRNA MGP_CBAJ_T0008910.1 MGP_CBAJ_G0007167.1 mouse_genomes_project 7 139116634 139138893 - 4933440M02Rik lincRNA lincRNA MGP_CBAJ_T0008911.1 MGP_CBAJ_G0007167.1 mouse_genomes_project 7 139118773 139138909 - 4933440M02Rik lincRNA lincRNA MGP_CBAJ_T0102177.1 MGP_CBAJ_G0040206.1 mouse_genomes_project 7 94204688 94204963 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010711.1 MGP_CBAJ_G0008849.1 mouse_genomes_project 7 4261773 4261857 + Mir3099 miRNA miRNA MGP_CBAJ_T0084472.1 MGP_CBAJ_G0032166.1 mouse_genomes_project 7 99033434 99080298 - MGP_CBAJ_P0084472 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084473.1 MGP_CBAJ_G0032166.1 mouse_genomes_project 7 99033675 99080287 - MGP_CBAJ_P0084473 protein_coding protein_coding MGP_CBAJ_T0002226.1 MGP_CBAJ_G0002140.1 mouse_genomes_project 7 83467477 83469668 + TEC TEC MGP_CBAJ_T0084120.1 MGP_CBAJ_G0032064.1 mouse_genomes_project 7 87686518 87693642 - MGP_CBAJ_P0084120 Pex11a protein_coding protein_coding MGP_CBAJ_T0084121.1 MGP_CBAJ_G0032064.1 mouse_genomes_project 7 87687650 87693693 - Pex11a protein_coding processed_transcript MGP_CBAJ_T0084122.1 MGP_CBAJ_G0032064.1 mouse_genomes_project 7 87687811 87689286 - Pex11a protein_coding retained_intron MGP_CBAJ_T0084123.1 MGP_CBAJ_G0032064.1 mouse_genomes_project 7 87688333 87690918 - Pex11a protein_coding retained_intron MGP_CBAJ_T0008772.1 MGP_CBAJ_G0007075.1 mouse_genomes_project 7 54633477 54634916 - Gm26856 lincRNA lincRNA MGP_CBAJ_T0011570.1 MGP_CBAJ_G0009708.1 mouse_genomes_project 7 145047094 145047170 - Gm27884 misc_RNA misc_RNA MGP_CBAJ_T0008731.1 MGP_CBAJ_G0007044.1 mouse_genomes_project 7 36788431 36801410 - Gm12756 lincRNA lincRNA MGP_CBAJ_T0080996.1 MGP_CBAJ_G0031223.1 mouse_genomes_project 7 1980954 1986056 - MGP_CBAJ_P0080996 Tmem238 protein_coding protein_coding MGP_CBAJ_T0080997.1 MGP_CBAJ_G0031223.1 mouse_genomes_project 7 1981569 1985473 - MGP_CBAJ_P0080997 Tmem238 protein_coding nonsense_mediated_decay MGP_CBAJ_T0010729.1 MGP_CBAJ_G0008867.1 mouse_genomes_project 7 29527763 29527823 - Mir7049 miRNA miRNA MGP_CBAJ_T0085736.1 MGP_CBAJ_G0032594.1 mouse_genomes_project 7 133260296 133283853 + MGP_CBAJ_P0085736 Tmem159 protein_coding protein_coding MGP_CBAJ_T0085737.1 MGP_CBAJ_G0032594.1 mouse_genomes_project 7 133260315 133263160 + Tmem159 protein_coding retained_intron MGP_CBAJ_T0085738.1 MGP_CBAJ_G0032594.1 mouse_genomes_project 7 133260828 133283859 + MGP_CBAJ_P0085738 Tmem159 protein_coding protein_coding MGP_CBAJ_T0102208.1 MGP_CBAJ_G0040237.1 mouse_genomes_project 7 115109626 115110581 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085734.1 MGP_CBAJ_G0032593.1 mouse_genomes_project 7 133055286 133251325 - MGP_CBAJ_P0085734 Dnah3 protein_coding protein_coding MGP_CBAJ_T0085735.1 MGP_CBAJ_G0032593.1 mouse_genomes_project 7 133055286 133251325 - MGP_CBAJ_P0085735 Dnah3 protein_coding unknown_likely_coding MGP_CBAJ_T0082204.1 MGP_CBAJ_G0031617.1 mouse_genomes_project 7 29380318 29392298 + MGP_CBAJ_P0082204 Lrfn1 protein_coding protein_coding MGP_CBAJ_T0082205.1 MGP_CBAJ_G0031617.1 mouse_genomes_project 7 29380486 29396795 + MGP_CBAJ_P0082205 Lrfn1 protein_coding protein_coding MGP_CBAJ_T0082206.1 MGP_CBAJ_G0031617.1 mouse_genomes_project 7 29380576 29393424 + Lrfn1 protein_coding retained_intron MGP_CBAJ_T0082207.1 MGP_CBAJ_G0031617.1 mouse_genomes_project 7 29391670 29396730 + MGP_CBAJ_P0082207 Lrfn1 protein_coding protein_coding MGP_CBAJ_T0082208.1 MGP_CBAJ_G0031617.1 mouse_genomes_project 7 29391670 29402909 + MGP_CBAJ_P0082208 Lrfn1 protein_coding protein_coding MGP_CBAJ_T0084994.1 MGP_CBAJ_G0032292.1 mouse_genomes_project 7 113616727 113621413 - MGP_CBAJ_P0084994 Olfr559 protein_coding protein_coding MGP_CBAJ_T0083267.1 MGP_CBAJ_G0031867.1 mouse_genomes_project 7 49110558 49118592 - MGP_CBAJ_P0083267 Prrg2 protein_coding protein_coding MGP_CBAJ_T0086055.1 MGP_CBAJ_G0032659.1 mouse_genomes_project 7 140534052 140539998 - MGP_CBAJ_P0086055 Il27 protein_coding protein_coding MGP_CBAJ_T0010797.1 MGP_CBAJ_G0008935.1 mouse_genomes_project 7 141055721 141055811 - Gm44343 miRNA miRNA MGP_CBAJ_T0084449.1 MGP_CBAJ_G0032159.1 mouse_genomes_project 7 97329995 97367226 + MGP_CBAJ_P0084449 Ctsc protein_coding protein_coding MGP_CBAJ_T0084450.1 MGP_CBAJ_G0032159.1 mouse_genomes_project 7 97330044 97364359 + MGP_CBAJ_P0084450 Ctsc protein_coding protein_coding MGP_CBAJ_T0084451.1 MGP_CBAJ_G0032159.1 mouse_genomes_project 7 97330048 97335389 + Ctsc protein_coding retained_intron MGP_CBAJ_T0084452.1 MGP_CBAJ_G0032159.1 mouse_genomes_project 7 97330048 97347715 + Ctsc protein_coding retained_intron MGP_CBAJ_T0084453.1 MGP_CBAJ_G0032159.1 mouse_genomes_project 7 97353194 97358644 + Ctsc protein_coding retained_intron MGP_CBAJ_T0081277.1 MGP_CBAJ_G0031350.1 mouse_genomes_project 7 14631650 14637117 - MGP_CBAJ_P0081277 Obox6 protein_coding protein_coding MGP_CBAJ_T0085095.1 MGP_CBAJ_G0032376.1 mouse_genomes_project 7 115465612 115480018 - MGP_CBAJ_P0085095 protein_coding protein_coding MGP_CBAJ_T0085099.1 MGP_CBAJ_G0032376.1 mouse_genomes_project 7 115471727 115480005 - MGP_CBAJ_P0085099 protein_coding protein_coding MGP_CBAJ_T0102126.1 MGP_CBAJ_G0040155.1 mouse_genomes_project 7 41964884 41973245 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015654.1 MGP_CBAJ_G0013766.1 mouse_genomes_project 7 111098729 111099082 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0082388.1 MGP_CBAJ_G0031661.1 mouse_genomes_project 7 31209345 31222168 + MGP_CBAJ_P0082388 Zfp383 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082389.1 MGP_CBAJ_G0031661.1 mouse_genomes_project 7 31209639 31222162 + MGP_CBAJ_P0082389 Zfp383 protein_coding protein_coding MGP_CBAJ_T0085027.1 MGP_CBAJ_G0032322.1 mouse_genomes_project 7 114467978 114468923 - MGP_CBAJ_P0085027 protein_coding protein_coding MGP_CBAJ_T0010705.1 MGP_CBAJ_G0008843.1 mouse_genomes_project 7 177594 177676 + Mir294 miRNA miRNA MGP_CBAJ_T0082033.1 MGP_CBAJ_G0031574.1 mouse_genomes_project 7 27862417 27887897 - MGP_CBAJ_P0082033 Itpkc protein_coding protein_coding MGP_CBAJ_T0082034.1 MGP_CBAJ_G0031574.1 mouse_genomes_project 7 27863215 27868298 - Itpkc protein_coding processed_transcript MGP_CBAJ_T0082035.1 MGP_CBAJ_G0031574.1 mouse_genomes_project 7 27867810 27869700 - Itpkc protein_coding retained_intron MGP_CBAJ_T0082036.1 MGP_CBAJ_G0031574.1 mouse_genomes_project 7 27885012 27887930 - Itpkc protein_coding retained_intron MGP_CBAJ_T0002233.1 MGP_CBAJ_G0002147.1 mouse_genomes_project 7 86738940 86740571 - TEC TEC MGP_CBAJ_T0005122.1 MGP_CBAJ_G0004355.1 mouse_genomes_project 7 40219004 40221554 + 4930505M18Rik antisense antisense MGP_CBAJ_T0015676.1 MGP_CBAJ_G0013788.1 mouse_genomes_project 7 134546187 134546929 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100763.1 MGP_CBAJ_G0039018.1 mouse_genomes_project 7 123221224 123221392 - Gm23262 snoRNA snoRNA MGP_CBAJ_T0082227.1 MGP_CBAJ_G0031625.1 mouse_genomes_project 7 29715425 29738748 + MGP_CBAJ_P0082227 Fbxo17 protein_coding protein_coding MGP_CBAJ_T0082228.1 MGP_CBAJ_G0031625.1 mouse_genomes_project 7 29715453 29738742 + MGP_CBAJ_P0082228 Fbxo17 protein_coding protein_coding MGP_CBAJ_T0082229.1 MGP_CBAJ_G0031625.1 mouse_genomes_project 7 29715477 29725596 + Fbxo17 protein_coding retained_intron MGP_CBAJ_T0082230.1 MGP_CBAJ_G0031625.1 mouse_genomes_project 7 29715494 29738748 + MGP_CBAJ_P0082230 Fbxo17 protein_coding protein_coding MGP_CBAJ_T0082231.1 MGP_CBAJ_G0031625.1 mouse_genomes_project 7 29732752 29738086 + MGP_CBAJ_P0082231 Fbxo17 protein_coding protein_coding MGP_CBAJ_T0085022.1 MGP_CBAJ_G0032317.1 mouse_genomes_project 7 114329609 114334808 + MGP_CBAJ_P0085022 Olfr597 protein_coding protein_coding MGP_CBAJ_T0081660.1 MGP_CBAJ_G0031466.1 mouse_genomes_project 7 19546850 19565634 - MGP_CBAJ_P0081660 Pvr protein_coding protein_coding MGP_CBAJ_T0081661.1 MGP_CBAJ_G0031466.1 mouse_genomes_project 7 19548346 19552926 - Pvr protein_coding retained_intron MGP_CBAJ_T0081662.1 MGP_CBAJ_G0031466.1 mouse_genomes_project 7 19557730 19565587 - Pvr protein_coding retained_intron MGP_CBAJ_T0081663.1 MGP_CBAJ_G0031466.1 mouse_genomes_project 7 19559239 19565587 - Pvr protein_coding retained_intron MGP_CBAJ_T0081470.1 MGP_CBAJ_G0031415.1 mouse_genomes_project 7 18464614 18466177 + MGP_CBAJ_P0081470 Nanos2 protein_coding protein_coding MGP_CBAJ_T0015645.1 MGP_CBAJ_G0013757.1 mouse_genomes_project 7 108088596 108088980 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0102168.1 MGP_CBAJ_G0040197.1 mouse_genomes_project 7 93602182 94605483 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0086952.1 MGP_CBAJ_G0032849.1 mouse_genomes_project 7 155995435 155997239 + MGP_CBAJ_P0086952 Olfr533 protein_coding protein_coding MGP_CBAJ_T0082645.1 MGP_CBAJ_G0031719.1 mouse_genomes_project 7 32383711 32405688 - MGP_CBAJ_P0082645 Mag protein_coding protein_coding MGP_CBAJ_T0082646.1 MGP_CBAJ_G0031719.1 mouse_genomes_project 7 32383718 32405186 - MGP_CBAJ_P0082646 Mag protein_coding protein_coding MGP_CBAJ_T0082647.1 MGP_CBAJ_G0031719.1 mouse_genomes_project 7 32384066 32405167 - MGP_CBAJ_P0082647 Mag protein_coding protein_coding MGP_CBAJ_T0082648.1 MGP_CBAJ_G0031719.1 mouse_genomes_project 7 32384121 32405167 - MGP_CBAJ_P0082648 Mag protein_coding protein_coding MGP_CBAJ_T0082649.1 MGP_CBAJ_G0031719.1 mouse_genomes_project 7 32391510 32405729 - Mag protein_coding retained_intron MGP_CBAJ_T0082650.1 MGP_CBAJ_G0031719.1 mouse_genomes_project 7 32395281 32405721 - MGP_CBAJ_P0082650 Mag protein_coding protein_coding MGP_CBAJ_T0082651.1 MGP_CBAJ_G0031719.1 mouse_genomes_project 7 32397766 32405680 - MGP_CBAJ_P0082651 Mag protein_coding protein_coding MGP_CBAJ_T0082652.1 MGP_CBAJ_G0031719.1 mouse_genomes_project 7 32398143 32405701 - Mag protein_coding processed_transcript MGP_CBAJ_T0082906.1 MGP_CBAJ_G0031770.1 mouse_genomes_project 7 39995294 40005473 - MGP_CBAJ_P0082906 Zfp536 protein_coding protein_coding MGP_CBAJ_T0082907.1 MGP_CBAJ_G0031770.1 mouse_genomes_project 7 40004596 40336155 - MGP_CBAJ_P0082907 Zfp536 protein_coding protein_coding MGP_CBAJ_T0082908.1 MGP_CBAJ_G0031770.1 mouse_genomes_project 7 40004601 40336496 - MGP_CBAJ_P0082908 Zfp536 protein_coding protein_coding MGP_CBAJ_T0082909.1 MGP_CBAJ_G0031770.1 mouse_genomes_project 7 40004614 40337514 - MGP_CBAJ_P0082909 Zfp536 protein_coding protein_coding MGP_CBAJ_T0082910.1 MGP_CBAJ_G0031770.1 mouse_genomes_project 7 40004669 40342272 - MGP_CBAJ_P0082910 Zfp536 protein_coding protein_coding MGP_CBAJ_T0082911.1 MGP_CBAJ_G0031770.1 mouse_genomes_project 7 40102840 40337316 - MGP_CBAJ_P0082911 Zfp536 protein_coding protein_coding MGP_CBAJ_T0082912.1 MGP_CBAJ_G0031770.1 mouse_genomes_project 7 40102970 40343040 - MGP_CBAJ_P0082912 Zfp536 protein_coding protein_coding MGP_CBAJ_T0082913.1 MGP_CBAJ_G0031770.1 mouse_genomes_project 7 40267140 40342976 - Zfp536 protein_coding processed_transcript MGP_CBAJ_T0082914.1 MGP_CBAJ_G0031770.1 mouse_genomes_project 7 40273388 40342961 - Zfp536 protein_coding retained_intron MGP_CBAJ_T0082915.1 MGP_CBAJ_G0031770.1 mouse_genomes_project 7 40341778 40342982 - Zfp536 protein_coding retained_intron MGP_CBAJ_T0081204.1 MGP_CBAJ_G0031320.1 mouse_genomes_project 7 11190110 11192882 - MGP_CBAJ_P0081204 Chmp2a protein_coding protein_coding MGP_CBAJ_T0010768.1 MGP_CBAJ_G0008906.1 mouse_genomes_project 7 67908136 67908207 - Mir344g miRNA miRNA MGP_CBAJ_T0008944.1 MGP_CBAJ_G0007189.1 mouse_genomes_project 7 145317597 145319612 - Etos1 lincRNA lincRNA MGP_CBAJ_T0085335.1 MGP_CBAJ_G0032505.1 mouse_genomes_project 7 120784187 120785189 - MGP_CBAJ_P0085335 Olfr518 protein_coding protein_coding MGP_CBAJ_T0099494.1 MGP_CBAJ_G0037749.1 mouse_genomes_project 7 69633029 69633130 + Gm22228 snRNA snRNA MGP_CBAJ_T0086940.1 MGP_CBAJ_G0032839.1 mouse_genomes_project 7 155682971 155684027 + MGP_CBAJ_P0086940 Olfr523 protein_coding protein_coding MGP_CBAJ_T0008694.1 MGP_CBAJ_G0007012.1 mouse_genomes_project 7 606050 622383 - Gm44920 lincRNA lincRNA MGP_CBAJ_T0081999.1 MGP_CBAJ_G0031565.1 mouse_genomes_project 7 27600331 27614556 + MGP_CBAJ_P0081999 protein_coding protein_coding MGP_CBAJ_T0081692.1 MGP_CBAJ_G0031486.1 mouse_genomes_project 7 24015378 24021207 + Zfp235 protein_coding retained_intron MGP_CBAJ_T0081693.1 MGP_CBAJ_G0031486.1 mouse_genomes_project 7 24015383 24022010 + Zfp235 protein_coding processed_transcript MGP_CBAJ_T0081694.1 MGP_CBAJ_G0031486.1 mouse_genomes_project 7 24015405 24029582 + MGP_CBAJ_P0081694 Zfp235 protein_coding protein_coding MGP_CBAJ_T0081695.1 MGP_CBAJ_G0031486.1 mouse_genomes_project 7 24015416 24020585 + Zfp235 protein_coding retained_intron MGP_CBAJ_T0081696.1 MGP_CBAJ_G0031486.1 mouse_genomes_project 7 24015437 24022014 + Zfp235 protein_coding processed_transcript MGP_CBAJ_T0081697.1 MGP_CBAJ_G0031486.1 mouse_genomes_project 7 24015451 24031900 + MGP_CBAJ_P0081697 Zfp235 protein_coding protein_coding MGP_CBAJ_T0084428.1 MGP_CBAJ_G0032149.1 mouse_genomes_project 7 95521425 95522436 + MGP_CBAJ_P0084428 Olfr293 protein_coding protein_coding MGP_CBAJ_T0102068.1 MGP_CBAJ_G0040098.1 mouse_genomes_project 7 10274456 10275407 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085045.1 MGP_CBAJ_G0032340.1 mouse_genomes_project 7 114853252 114854318 - MGP_CBAJ_P0085045 Olfr630 protein_coding protein_coding MGP_CBAJ_T0082579.1 MGP_CBAJ_G0031703.1 mouse_genomes_project 7 32045014 32056565 - MGP_CBAJ_P0082579 Cox6b1 protein_coding protein_coding MGP_CBAJ_T0081179.1 MGP_CBAJ_G0031315.1 mouse_genomes_project 7 11109941 11117920 + MGP_CBAJ_P0081179 Zfp324 protein_coding protein_coding MGP_CBAJ_T0081180.1 MGP_CBAJ_G0031315.1 mouse_genomes_project 7 11109948 11118334 + MGP_CBAJ_P0081180 Zfp324 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081181.1 MGP_CBAJ_G0031315.1 mouse_genomes_project 7 11109970 11117897 + MGP_CBAJ_P0081181 Zfp324 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084990.1 MGP_CBAJ_G0032288.1 mouse_genomes_project 7 113558700 113559723 + MGP_CBAJ_P0084990 Olfr556 protein_coding protein_coding MGP_CBAJ_T0102117.1 MGP_CBAJ_G0040146.1 mouse_genomes_project 7 35842650 35843488 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0098460.1 MGP_CBAJ_G0036721.1 mouse_genomes_project 7 144093643 144120058 + Gm33248 sense_intronic sense_intronic MGP_CBAJ_T0086515.1 MGP_CBAJ_G0032744.1 mouse_genomes_project 7 142419945 142481699 + MGP_CBAJ_P0086515 protein_coding protein_coding MGP_CBAJ_T0086516.1 MGP_CBAJ_G0032744.1 mouse_genomes_project 7 142446114 142481702 + MGP_CBAJ_P0086516 protein_coding protein_coding MGP_CBAJ_T0086517.1 MGP_CBAJ_G0032744.1 mouse_genomes_project 7 142446123 142481699 + MGP_CBAJ_P0086517 protein_coding protein_coding MGP_CBAJ_T0086518.1 MGP_CBAJ_G0032744.1 mouse_genomes_project 7 142479809 142481702 + MGP_CBAJ_P0086518 protein_coding protein_coding MGP_CBAJ_T0086519.1 MGP_CBAJ_G0032744.1 mouse_genomes_project 7 142480071 142502135 + MGP_CBAJ_P0086519 protein_coding protein_coding MGP_CBAJ_T0084565.1 MGP_CBAJ_G0032190.1 mouse_genomes_project 7 107499818 107509382 + MGP_CBAJ_P0084565 Ndufc2 protein_coding protein_coding MGP_CBAJ_T0084566.1 MGP_CBAJ_G0032190.1 mouse_genomes_project 7 107499918 107508660 + MGP_CBAJ_P0084566 Ndufc2 protein_coding protein_coding MGP_CBAJ_T0085482.1 MGP_CBAJ_G0032541.1 mouse_genomes_project 7 124712808 124894656 + MGP_CBAJ_P0085482 Parva protein_coding protein_coding MGP_CBAJ_T0085483.1 MGP_CBAJ_G0032541.1 mouse_genomes_project 7 124713001 124896719 + MGP_CBAJ_P0085483 Parva protein_coding protein_coding MGP_CBAJ_T0085484.1 MGP_CBAJ_G0032541.1 mouse_genomes_project 7 124713200 124856346 + MGP_CBAJ_P0085484 Parva protein_coding nonsense_mediated_decay MGP_CBAJ_T0085485.1 MGP_CBAJ_G0032541.1 mouse_genomes_project 7 124795688 124848400 + Parva protein_coding processed_transcript MGP_CBAJ_T0085486.1 MGP_CBAJ_G0032541.1 mouse_genomes_project 7 124814213 124893997 + MGP_CBAJ_P0085486 Parva protein_coding protein_coding MGP_CBAJ_T0085487.1 MGP_CBAJ_G0032541.1 mouse_genomes_project 7 124872625 124883059 + Parva protein_coding processed_transcript MGP_CBAJ_T0081820.1 MGP_CBAJ_G0031520.1 mouse_genomes_project 7 25052202 25055207 - MGP_CBAJ_P0081820 Rabac1 protein_coding protein_coding MGP_CBAJ_T0081821.1 MGP_CBAJ_G0031520.1 mouse_genomes_project 7 25052203 25054437 - Rabac1 protein_coding retained_intron MGP_CBAJ_T0081822.1 MGP_CBAJ_G0031520.1 mouse_genomes_project 7 25052211 25054479 - Rabac1 protein_coding processed_transcript MGP_CBAJ_T0081823.1 MGP_CBAJ_G0031520.1 mouse_genomes_project 7 25052211 25055091 - MGP_CBAJ_P0081823 Rabac1 protein_coding protein_coding MGP_CBAJ_T0081824.1 MGP_CBAJ_G0031520.1 mouse_genomes_project 7 25052212 25054680 - Rabac1 protein_coding processed_transcript MGP_CBAJ_T0081825.1 MGP_CBAJ_G0031520.1 mouse_genomes_project 7 25053949 25055005 - Rabac1 protein_coding retained_intron MGP_CBAJ_T0084024.1 MGP_CBAJ_G0032048.1 mouse_genomes_project 7 86542948 86551645 - MGP_CBAJ_P0084024 Mrpl46 protein_coding protein_coding MGP_CBAJ_T0084025.1 MGP_CBAJ_G0032048.1 mouse_genomes_project 7 86543312 86552087 - Mrpl46 protein_coding processed_transcript MGP_CBAJ_T0102151.1 MGP_CBAJ_G0040180.1 mouse_genomes_project 7 52259871 52260358 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085762.1 MGP_CBAJ_G0032603.1 mouse_genomes_project 7 133934906 133996548 + MGP_CBAJ_P0085762 BC030336 protein_coding protein_coding MGP_CBAJ_T0008815.1 MGP_CBAJ_G0007109.1 mouse_genomes_project 7 80487223 80492031 + 4930429H19Rik lincRNA lincRNA MGP_CBAJ_T0008816.1 MGP_CBAJ_G0007109.1 mouse_genomes_project 7 80487373 80488798 + 4930429H19Rik lincRNA lincRNA MGP_CBAJ_T0084232.1 MGP_CBAJ_G0032085.1 mouse_genomes_project 7 88435579 88446026 - protein_coding retained_intron MGP_CBAJ_T0084233.1 MGP_CBAJ_G0032085.1 mouse_genomes_project 7 88436187 88451750 - MGP_CBAJ_P0084233 protein_coding unknown_likely_coding MGP_CBAJ_T0084234.1 MGP_CBAJ_G0032085.1 mouse_genomes_project 7 88445982 88449140 - protein_coding retained_intron MGP_CBAJ_T0084235.1 MGP_CBAJ_G0032085.1 mouse_genomes_project 7 88448264 88455086 - MGP_CBAJ_P0084235 protein_coding protein_coding MGP_CBAJ_T0084236.1 MGP_CBAJ_G0032085.1 mouse_genomes_project 7 88448311 88452972 - MGP_CBAJ_P0084236 protein_coding protein_coding MGP_CBAJ_T0081041.1 MGP_CBAJ_G0031244.1 mouse_genomes_project 7 2309271 2327623 + MGP_CBAJ_P0081041 U2af2 protein_coding protein_coding MGP_CBAJ_T0084531.1 MGP_CBAJ_G0032182.1 mouse_genomes_project 7 102453857 102471664 - MGP_CBAJ_P0084531 Ddias protein_coding protein_coding MGP_CBAJ_T0085139.1 MGP_CBAJ_G0032406.1 mouse_genomes_project 7 116342373 116343315 + MGP_CBAJ_P0085139 Olfr678 protein_coding protein_coding MGP_CBAJ_T0086955.1 MGP_CBAJ_G0032852.1 mouse_genomes_project 7 156173455 156174613 + MGP_CBAJ_P0086955 Olfr46 protein_coding protein_coding MGP_CBAJ_T0008918.1 MGP_CBAJ_G0007172.1 mouse_genomes_project 7 140711415 140713174 + 4930448A20Rik lincRNA lincRNA MGP_CBAJ_T0082822.1 MGP_CBAJ_G0031755.1 mouse_genomes_project 7 37392162 37406888 + MGP_CBAJ_P0082822 Slc7a10 protein_coding protein_coding MGP_CBAJ_T0082823.1 MGP_CBAJ_G0031755.1 mouse_genomes_project 7 37392162 37401225 + MGP_CBAJ_P0082823 Slc7a10 protein_coding protein_coding MGP_CBAJ_T0082824.1 MGP_CBAJ_G0031755.1 mouse_genomes_project 7 37392198 37406688 + MGP_CBAJ_P0082824 Slc7a10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082825.1 MGP_CBAJ_G0031755.1 mouse_genomes_project 7 37392259 37403725 + MGP_CBAJ_P0082825 Slc7a10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082826.1 MGP_CBAJ_G0031755.1 mouse_genomes_project 7 37404688 37406669 + MGP_CBAJ_P0082826 Slc7a10 protein_coding protein_coding MGP_CBAJ_T0081251.1 MGP_CBAJ_G0031334.1 mouse_genomes_project 7 11834294 11897493 + MGP_CBAJ_P0081251 Sult2a2 protein_coding protein_coding MGP_CBAJ_T0101386.1 MGP_CBAJ_G0039451.1 mouse_genomes_project 7 47684234 47725731 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101387.1 MGP_CBAJ_G0039451.1 mouse_genomes_project 7 47684236 47952911 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0085273.1 MGP_CBAJ_G0032451.1 mouse_genomes_project 7 118575844 118576876 - MGP_CBAJ_P0085273 protein_coding protein_coding MGP_CBAJ_T0081089.1 MGP_CBAJ_G0031262.1 mouse_genomes_project 7 3778375 3793671 + MGP_CBAJ_P0081089 Zfp28 protein_coding protein_coding MGP_CBAJ_T0085088.1 MGP_CBAJ_G0032374.1 mouse_genomes_project 7 115449276 115464465 + MGP_CBAJ_P0085088 protein_coding protein_coding MGP_CBAJ_T0085089.1 MGP_CBAJ_G0032374.1 mouse_genomes_project 7 115449278 115464465 + MGP_CBAJ_P0085089 protein_coding protein_coding MGP_CBAJ_T0085091.1 MGP_CBAJ_G0032374.1 mouse_genomes_project 7 115449374 115467480 + MGP_CBAJ_P0085091 protein_coding protein_coding MGP_CBAJ_T0085092.1 MGP_CBAJ_G0032374.1 mouse_genomes_project 7 115449383 115463712 + MGP_CBAJ_P0085092 protein_coding protein_coding MGP_CBAJ_T0081712.1 MGP_CBAJ_G0031492.1 mouse_genomes_project 7 24215091 24223735 - MGP_CBAJ_P0081712 Zfp61 protein_coding protein_coding MGP_CBAJ_T0081713.1 MGP_CBAJ_G0031492.1 mouse_genomes_project 7 24215109 24220048 - MGP_CBAJ_P0081713 Zfp61 protein_coding protein_coding MGP_CBAJ_T0081714.1 MGP_CBAJ_G0031492.1 mouse_genomes_project 7 24216071 24219778 - Zfp61 protein_coding processed_transcript MGP_CBAJ_T0081715.1 MGP_CBAJ_G0031492.1 mouse_genomes_project 7 24216214 24223370 - MGP_CBAJ_P0081715 Zfp61 protein_coding protein_coding MGP_CBAJ_T0081716.1 MGP_CBAJ_G0031492.1 mouse_genomes_project 7 24217411 24219615 - Zfp61 protein_coding retained_intron MGP_CBAJ_T0081717.1 MGP_CBAJ_G0031492.1 mouse_genomes_project 7 24219137 24223358 - Zfp61 protein_coding processed_transcript MGP_CBAJ_T0081718.1 MGP_CBAJ_G0031492.1 mouse_genomes_project 7 24219380 24223461 - Zfp61 protein_coding retained_intron MGP_CBAJ_T0081719.1 MGP_CBAJ_G0031492.1 mouse_genomes_project 7 24221695 24228197 - Zfp61 protein_coding processed_transcript MGP_CBAJ_T0081720.1 MGP_CBAJ_G0031492.1 mouse_genomes_project 7 24222158 24223697 - Zfp61 protein_coding retained_intron MGP_CBAJ_T0085186.1 MGP_CBAJ_G0032426.1 mouse_genomes_project 7 116982730 117020326 - MGP_CBAJ_P0085186 Trim3 protein_coding protein_coding MGP_CBAJ_T0085187.1 MGP_CBAJ_G0032426.1 mouse_genomes_project 7 116988765 117020378 - MGP_CBAJ_P0085187 Trim3 protein_coding protein_coding MGP_CBAJ_T0085188.1 MGP_CBAJ_G0032426.1 mouse_genomes_project 7 116988943 117020355 - MGP_CBAJ_P0085188 Trim3 protein_coding protein_coding MGP_CBAJ_T0085189.1 MGP_CBAJ_G0032426.1 mouse_genomes_project 7 116989434 116990152 - Trim3 protein_coding retained_intron MGP_CBAJ_T0085190.1 MGP_CBAJ_G0032426.1 mouse_genomes_project 7 116990603 116991701 - Trim3 protein_coding retained_intron MGP_CBAJ_T0085191.1 MGP_CBAJ_G0032426.1 mouse_genomes_project 7 116995326 116996322 - Trim3 protein_coding retained_intron MGP_CBAJ_T0085192.1 MGP_CBAJ_G0032426.1 mouse_genomes_project 7 116997079 117020343 - MGP_CBAJ_P0085192 Trim3 protein_coding protein_coding MGP_CBAJ_T0085193.1 MGP_CBAJ_G0032426.1 mouse_genomes_project 7 116997401 117020389 - Trim3 protein_coding processed_transcript MGP_CBAJ_T0085194.1 MGP_CBAJ_G0032426.1 mouse_genomes_project 7 116997678 117020303 - MGP_CBAJ_P0085194 Trim3 protein_coding protein_coding MGP_CBAJ_T0083756.1 MGP_CBAJ_G0031994.1 mouse_genomes_project 7 65529495 65540428 - MGP_CBAJ_P0083756 Snurf protein_coding protein_coding MGP_CBAJ_T0087021.1 MGP_CBAJ_G0032878.1 mouse_genomes_project 7 156706422 156719023 + MGP_CBAJ_P0087021 Pkp3 protein_coding protein_coding MGP_CBAJ_T0087022.1 MGP_CBAJ_G0032878.1 mouse_genomes_project 7 156707351 156710851 + MGP_CBAJ_P0087022 Pkp3 protein_coding protein_coding MGP_CBAJ_T0087023.1 MGP_CBAJ_G0032878.1 mouse_genomes_project 7 156707964 156719023 + MGP_CBAJ_P0087023 Pkp3 protein_coding protein_coding MGP_CBAJ_T0087024.1 MGP_CBAJ_G0032878.1 mouse_genomes_project 7 156707979 156711326 + MGP_CBAJ_P0087024 Pkp3 protein_coding protein_coding MGP_CBAJ_T0087025.1 MGP_CBAJ_G0032878.1 mouse_genomes_project 7 156707984 156710900 + MGP_CBAJ_P0087025 Pkp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087026.1 MGP_CBAJ_G0032878.1 mouse_genomes_project 7 156716273 156717390 + Pkp3 protein_coding retained_intron MGP_CBAJ_T0087027.1 MGP_CBAJ_G0032878.1 mouse_genomes_project 7 156716658 156719020 + Pkp3 protein_coding retained_intron MGP_CBAJ_T0087028.1 MGP_CBAJ_G0032878.1 mouse_genomes_project 7 156716720 156717361 + Pkp3 protein_coding retained_intron MGP_CBAJ_T0087029.1 MGP_CBAJ_G0032878.1 mouse_genomes_project 7 156717923 156718429 + Pkp3 protein_coding retained_intron MGP_CBAJ_T0087030.1 MGP_CBAJ_G0032878.1 mouse_genomes_project 7 156718373 156719022 + MGP_CBAJ_P0087030 Pkp3 protein_coding protein_coding MGP_CBAJ_T0008746.1 MGP_CBAJ_G0007059.1 mouse_genomes_project 7 42388186 42397110 + Gm37494 lincRNA lincRNA MGP_CBAJ_T0008747.1 MGP_CBAJ_G0007059.1 mouse_genomes_project 7 42396277 42397508 + Gm37494 lincRNA lincRNA MGP_CBAJ_T0008748.1 MGP_CBAJ_G0007059.1 mouse_genomes_project 7 42396278 42425244 + Gm37494 lincRNA lincRNA MGP_CBAJ_T0008749.1 MGP_CBAJ_G0007059.1 mouse_genomes_project 7 42396302 42408931 + Gm37494 lincRNA lincRNA MGP_CBAJ_T0084064.1 MGP_CBAJ_G0032056.1 mouse_genomes_project 7 87177167 87266704 + MGP_CBAJ_P0084064 Abhd2 protein_coding protein_coding MGP_CBAJ_T0084065.1 MGP_CBAJ_G0032056.1 mouse_genomes_project 7 87177222 87246604 + Abhd2 protein_coding processed_transcript MGP_CBAJ_T0085763.1 MGP_CBAJ_G0032604.1 mouse_genomes_project 7 134002863 134070948 + MGP_CBAJ_P0085763 Vwa3a protein_coding protein_coding MGP_CBAJ_T0085764.1 MGP_CBAJ_G0032604.1 mouse_genomes_project 7 134002863 134054843 + MGP_CBAJ_P0085764 Vwa3a protein_coding nonsense_mediated_decay MGP_CBAJ_T0085765.1 MGP_CBAJ_G0032604.1 mouse_genomes_project 7 134003353 134071149 + MGP_CBAJ_P0085765 Vwa3a protein_coding protein_coding MGP_CBAJ_T0085766.1 MGP_CBAJ_G0032604.1 mouse_genomes_project 7 134003353 134070945 + MGP_CBAJ_P0085766 Vwa3a protein_coding protein_coding MGP_CBAJ_T0085767.1 MGP_CBAJ_G0032604.1 mouse_genomes_project 7 134003417 134070420 + MGP_CBAJ_P0085767 Vwa3a protein_coding unknown_likely_coding MGP_CBAJ_T0085768.1 MGP_CBAJ_G0032604.1 mouse_genomes_project 7 134047139 134054844 + MGP_CBAJ_P0085768 Vwa3a protein_coding protein_coding MGP_CBAJ_T0085769.1 MGP_CBAJ_G0032604.1 mouse_genomes_project 7 134048797 134054844 + Vwa3a protein_coding processed_transcript MGP_CBAJ_T0085770.1 MGP_CBAJ_G0032604.1 mouse_genomes_project 7 134051227 134057360 + MGP_CBAJ_P0085770 Vwa3a protein_coding protein_coding MGP_CBAJ_T0002188.1 MGP_CBAJ_G0002103.1 mouse_genomes_project 7 48315945 48318700 + TEC TEC MGP_CBAJ_T0085725.1 MGP_CBAJ_G0032591.1 mouse_genomes_project 7 132978071 133023260 - MGP_CBAJ_P0085725 Dcun1d3 protein_coding protein_coding MGP_CBAJ_T0085726.1 MGP_CBAJ_G0032591.1 mouse_genomes_project 7 132980723 133023058 - MGP_CBAJ_P0085726 Dcun1d3 protein_coding protein_coding MGP_CBAJ_T0085727.1 MGP_CBAJ_G0032591.1 mouse_genomes_project 7 132982235 133023806 - MGP_CBAJ_P0085727 Dcun1d3 protein_coding protein_coding MGP_CBAJ_T0085728.1 MGP_CBAJ_G0032591.1 mouse_genomes_project 7 132982902 132986747 - MGP_CBAJ_P0085728 Dcun1d3 protein_coding protein_coding MGP_CBAJ_T0085729.1 MGP_CBAJ_G0032591.1 mouse_genomes_project 7 132984535 132986719 - MGP_CBAJ_P0085729 Dcun1d3 protein_coding protein_coding MGP_CBAJ_T0099503.1 MGP_CBAJ_G0037758.1 mouse_genomes_project 7 100778199 100778305 - Gm22080 snRNA snRNA MGP_CBAJ_T0015701.1 MGP_CBAJ_G0013813.1 mouse_genomes_project 7 143065854 143066304 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0083579.1 MGP_CBAJ_G0031947.1 mouse_genomes_project 7 51336212 51340427 + protein_coding processed_transcript MGP_CBAJ_T0083580.1 MGP_CBAJ_G0031947.1 mouse_genomes_project 7 51336293 51340435 + protein_coding processed_transcript MGP_CBAJ_T0083581.1 MGP_CBAJ_G0031947.1 mouse_genomes_project 7 51339452 51340428 + MGP_CBAJ_P0083581 protein_coding protein_coding MGP_CBAJ_T0005221.1 MGP_CBAJ_G0004424.1 mouse_genomes_project 7 143122958 143124056 - Gm44672 antisense antisense MGP_CBAJ_T0083570.1 MGP_CBAJ_G0031944.1 mouse_genomes_project 7 51197564 51215842 + MGP_CBAJ_P0083570 Ldhc protein_coding protein_coding MGP_CBAJ_T0083571.1 MGP_CBAJ_G0031944.1 mouse_genomes_project 7 51197683 51213488 + MGP_CBAJ_P0083571 Ldhc protein_coding protein_coding MGP_CBAJ_T0083572.1 MGP_CBAJ_G0031944.1 mouse_genomes_project 7 51197738 51214174 + MGP_CBAJ_P0083572 Ldhc protein_coding protein_coding MGP_CBAJ_T0099486.1 MGP_CBAJ_G0037741.1 mouse_genomes_project 7 43859718 43859799 + Gm25784 snRNA snRNA MGP_CBAJ_T0002194.1 MGP_CBAJ_G0002109.1 mouse_genomes_project 7 60371290 60373464 + TEC TEC MGP_CBAJ_T0085029.1 MGP_CBAJ_G0032324.1 mouse_genomes_project 7 114490364 114491279 - MGP_CBAJ_P0085029 protein_coding protein_coding MGP_CBAJ_T0086074.1 MGP_CBAJ_G0032663.1 mouse_genomes_project 7 140656852 140663185 - MGP_CBAJ_P0086074 Slx1b protein_coding protein_coding MGP_CBAJ_T0086075.1 MGP_CBAJ_G0032663.1 mouse_genomes_project 7 140658046 140663040 - Slx1b protein_coding retained_intron MGP_CBAJ_T0086076.1 MGP_CBAJ_G0032663.1 mouse_genomes_project 7 140658486 140663146 - Slx1b protein_coding retained_intron MGP_CBAJ_T0086077.1 MGP_CBAJ_G0032663.1 mouse_genomes_project 7 140658486 140663125 - MGP_CBAJ_P0086077 Slx1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0015532.1 MGP_CBAJ_G0013644.1 mouse_genomes_project 7 32715444 32716231 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0087324.1 MGP_CBAJ_G0032932.1 mouse_genomes_project 7 158545619 158546649 - MGP_CBAJ_P0087324 Ins2 protein_coding protein_coding MGP_CBAJ_T0087325.1 MGP_CBAJ_G0032932.1 mouse_genomes_project 7 158545619 158566454 - MGP_CBAJ_P0087325 Ins2 protein_coding protein_coding MGP_CBAJ_T0087326.1 MGP_CBAJ_G0032932.1 mouse_genomes_project 7 158545622 158546690 - MGP_CBAJ_P0087326 Ins2 protein_coding protein_coding MGP_CBAJ_T0087327.1 MGP_CBAJ_G0032932.1 mouse_genomes_project 7 158545622 158546662 - MGP_CBAJ_P0087327 Ins2 protein_coding protein_coding MGP_CBAJ_T0087328.1 MGP_CBAJ_G0032932.1 mouse_genomes_project 7 158545622 158546656 - MGP_CBAJ_P0087328 Ins2 protein_coding protein_coding MGP_CBAJ_T0087329.1 MGP_CBAJ_G0032932.1 mouse_genomes_project 7 158545624 158546681 - MGP_CBAJ_P0087329 Ins2 protein_coding protein_coding MGP_CBAJ_T0087330.1 MGP_CBAJ_G0032932.1 mouse_genomes_project 7 158545672 158546544 - MGP_CBAJ_P0087330 Ins2 protein_coding protein_coding MGP_CBAJ_T0087331.1 MGP_CBAJ_G0032932.1 mouse_genomes_project 7 158545676 158546497 - MGP_CBAJ_P0087331 Ins2 protein_coding protein_coding MGP_CBAJ_T0081036.1 MGP_CBAJ_G0031239.1 mouse_genomes_project 7 2278104 2279230 + MGP_CBAJ_P0081036 protein_coding protein_coding MGP_CBAJ_T0083818.1 MGP_CBAJ_G0032010.1 mouse_genomes_project 7 70924662 71364305 - MGP_CBAJ_P0083818 Fam189a1 protein_coding protein_coding MGP_CBAJ_T0083819.1 MGP_CBAJ_G0032010.1 mouse_genomes_project 7 70924684 70942217 - Fam189a1 protein_coding processed_transcript MGP_CBAJ_T0083820.1 MGP_CBAJ_G0032010.1 mouse_genomes_project 7 70936293 71105093 - MGP_CBAJ_P0083820 Fam189a1 protein_coding protein_coding MGP_CBAJ_T0083821.1 MGP_CBAJ_G0032010.1 mouse_genomes_project 7 70955254 71364151 - MGP_CBAJ_P0083821 Fam189a1 protein_coding protein_coding MGP_CBAJ_T0083822.1 MGP_CBAJ_G0032010.1 mouse_genomes_project 7 70989344 71030897 - Fam189a1 protein_coding retained_intron MGP_CBAJ_T0084417.1 MGP_CBAJ_G0032138.1 mouse_genomes_project 7 95127352 95128408 - MGP_CBAJ_P0084417 Olfr308 protein_coding protein_coding MGP_CBAJ_T0099502.1 MGP_CBAJ_G0037757.1 mouse_genomes_project 7 100614938 100615041 + Gm24552 snRNA snRNA MGP_CBAJ_T0083880.1 MGP_CBAJ_G0032023.1 mouse_genomes_project 7 73005554 73050566 - MGP_CBAJ_P0083880 Asb7 protein_coding protein_coding MGP_CBAJ_T0083881.1 MGP_CBAJ_G0032023.1 mouse_genomes_project 7 73005554 73049854 - MGP_CBAJ_P0083881 Asb7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083882.1 MGP_CBAJ_G0032023.1 mouse_genomes_project 7 73037988 73050444 - MGP_CBAJ_P0083882 Asb7 protein_coding protein_coding MGP_CBAJ_T0082741.1 MGP_CBAJ_G0031735.1 mouse_genomes_project 7 32915091 32917970 - MGP_CBAJ_P0082741 Scgb2b3 protein_coding protein_coding MGP_CBAJ_T0083562.1 MGP_CBAJ_G0031943.1 mouse_genomes_project 7 51176593 51187109 + MGP_CBAJ_P0083562 Ldha protein_coding protein_coding MGP_CBAJ_T0083563.1 MGP_CBAJ_G0031943.1 mouse_genomes_project 7 51180953 51191986 + MGP_CBAJ_P0083563 Ldha protein_coding protein_coding MGP_CBAJ_T0083564.1 MGP_CBAJ_G0031943.1 mouse_genomes_project 7 51180957 51184160 + Ldha protein_coding processed_transcript MGP_CBAJ_T0083565.1 MGP_CBAJ_G0031943.1 mouse_genomes_project 7 51180957 51183260 + Ldha protein_coding retained_intron MGP_CBAJ_T0083566.1 MGP_CBAJ_G0031943.1 mouse_genomes_project 7 51180977 51187118 + MGP_CBAJ_P0083566 Ldha protein_coding protein_coding MGP_CBAJ_T0083567.1 MGP_CBAJ_G0031943.1 mouse_genomes_project 7 51181211 51184166 + Ldha protein_coding processed_transcript MGP_CBAJ_T0083568.1 MGP_CBAJ_G0031943.1 mouse_genomes_project 7 51182245 51191985 + MGP_CBAJ_P0083568 Ldha protein_coding protein_coding MGP_CBAJ_T0083569.1 MGP_CBAJ_G0031943.1 mouse_genomes_project 7 51182619 51186111 + Ldha protein_coding retained_intron MGP_CBAJ_T0102181.1 MGP_CBAJ_G0040210.1 mouse_genomes_project 7 94416946 94419177 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010728.1 MGP_CBAJ_G0008866.1 mouse_genomes_project 7 27860781 27860901 + Mir1191 miRNA miRNA MGP_CBAJ_T0085049.1 MGP_CBAJ_G0032344.1 mouse_genomes_project 7 114929489 114930937 - MGP_CBAJ_P0085049 protein_coding protein_coding MGP_CBAJ_T0080801.1 MGP_CBAJ_G0031189.1 mouse_genomes_project 7 682938 690552 - MGP_CBAJ_P0080801 Leng1 protein_coding protein_coding MGP_CBAJ_T0081265.1 MGP_CBAJ_G0031344.1 mouse_genomes_project 7 12983081 12985725 - MGP_CBAJ_P0081265 protein_coding protein_coding MGP_CBAJ_T0010798.1 MGP_CBAJ_G0008936.1 mouse_genomes_project 7 141613655 141613792 + Mir7060 miRNA miRNA MGP_CBAJ_T0011569.1 MGP_CBAJ_G0009707.1 mouse_genomes_project 7 141054670 141054916 + Gm25333 misc_RNA misc_RNA MGP_CBAJ_T0081675.1 MGP_CBAJ_G0031475.1 mouse_genomes_project 7 23558786 23569523 + MGP_CBAJ_P0081675 Vmn1r172 protein_coding protein_coding MGP_CBAJ_T0002190.1 MGP_CBAJ_G0002105.1 mouse_genomes_project 7 53888088 53891668 + TEC TEC MGP_CBAJ_T0081982.1 MGP_CBAJ_G0031559.1 mouse_genomes_project 7 26954709 26998292 + MGP_CBAJ_P0081982 Nlrp9a protein_coding protein_coding MGP_CBAJ_T0081983.1 MGP_CBAJ_G0031559.1 mouse_genomes_project 7 26954751 26998288 + MGP_CBAJ_P0081983 Nlrp9a protein_coding protein_coding MGP_CBAJ_T0081984.1 MGP_CBAJ_G0031559.1 mouse_genomes_project 7 26954752 26992147 + MGP_CBAJ_P0081984 Nlrp9a protein_coding protein_coding MGP_CBAJ_T0081985.1 MGP_CBAJ_G0031559.1 mouse_genomes_project 7 26954757 26989160 + Nlrp9a protein_coding processed_transcript MGP_CBAJ_T0081986.1 MGP_CBAJ_G0031559.1 mouse_genomes_project 7 26972476 26998097 + MGP_CBAJ_P0081986 Nlrp9a protein_coding protein_coding MGP_CBAJ_T0081987.1 MGP_CBAJ_G0031559.1 mouse_genomes_project 7 26972476 26999759 + MGP_CBAJ_P0081987 Nlrp9a protein_coding protein_coding MGP_CBAJ_T0099524.1 MGP_CBAJ_G0037779.1 mouse_genomes_project 7 140510930 140511036 - Gm25579 snRNA snRNA MGP_CBAJ_T0086667.1 MGP_CBAJ_G0032767.1 mouse_genomes_project 7 145812219 145820696 - MGP_CBAJ_P0086667 4933402N03Rik protein_coding protein_coding MGP_CBAJ_T0082766.1 MGP_CBAJ_G0031745.1 mouse_genomes_project 7 36243572 36259251 - MGP_CBAJ_P0082766 Pdcd2l protein_coding protein_coding MGP_CBAJ_T0082767.1 MGP_CBAJ_G0031745.1 mouse_genomes_project 7 36243706 36259198 - MGP_CBAJ_P0082767 Pdcd2l protein_coding protein_coding MGP_CBAJ_T0082768.1 MGP_CBAJ_G0031745.1 mouse_genomes_project 7 36249788 36255371 - Pdcd2l protein_coding retained_intron MGP_CBAJ_T0082769.1 MGP_CBAJ_G0031745.1 mouse_genomes_project 7 36255432 36258736 - Pdcd2l protein_coding processed_transcript MGP_CBAJ_T0085782.1 MGP_CBAJ_G0032607.1 mouse_genomes_project 7 134240314 134265052 - Cdr2 protein_coding processed_transcript MGP_CBAJ_T0085783.1 MGP_CBAJ_G0032607.1 mouse_genomes_project 7 134240314 134265574 - MGP_CBAJ_P0085783 Cdr2 protein_coding protein_coding MGP_CBAJ_T0100746.1 MGP_CBAJ_G0039001.1 mouse_genomes_project 7 76706260 76706389 - Gm24120 snoRNA snoRNA MGP_CBAJ_T0084400.1 MGP_CBAJ_G0032127.1 mouse_genomes_project 7 92784239 92901257 - MGP_CBAJ_P0084400 Arnt2 protein_coding unknown_likely_coding MGP_CBAJ_T0084401.1 MGP_CBAJ_G0032127.1 mouse_genomes_project 7 92784245 92951320 - MGP_CBAJ_P0084401 Arnt2 protein_coding protein_coding MGP_CBAJ_T0102219.1 MGP_CBAJ_G0040248.1 mouse_genomes_project 7 117233021 117854994 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015692.1 MGP_CBAJ_G0013804.1 mouse_genomes_project 7 141353453 141357214 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008789.1 MGP_CBAJ_G0007089.1 mouse_genomes_project 7 74270013 74291555 - 4833412C05Rik lincRNA lincRNA MGP_CBAJ_T0081621.1 MGP_CBAJ_G0031457.1 mouse_genomes_project 7 19287863 19290922 - MGP_CBAJ_P0081621 Apoe protein_coding protein_coding MGP_CBAJ_T0081622.1 MGP_CBAJ_G0031457.1 mouse_genomes_project 7 19288020 19290808 - MGP_CBAJ_P0081622 Apoe protein_coding protein_coding MGP_CBAJ_T0081623.1 MGP_CBAJ_G0031457.1 mouse_genomes_project 7 19288025 19290163 - MGP_CBAJ_P0081623 Apoe protein_coding protein_coding MGP_CBAJ_T0081624.1 MGP_CBAJ_G0031457.1 mouse_genomes_project 7 19288025 19290764 - MGP_CBAJ_P0081624 Apoe protein_coding protein_coding MGP_CBAJ_T0081625.1 MGP_CBAJ_G0031457.1 mouse_genomes_project 7 19288025 19290808 - MGP_CBAJ_P0081625 Apoe protein_coding protein_coding MGP_CBAJ_T0081626.1 MGP_CBAJ_G0031457.1 mouse_genomes_project 7 19288373 19290794 - MGP_CBAJ_P0081626 Apoe protein_coding protein_coding MGP_CBAJ_T0081627.1 MGP_CBAJ_G0031457.1 mouse_genomes_project 7 19288374 19290377 - MGP_CBAJ_P0081627 Apoe protein_coding protein_coding MGP_CBAJ_T0081628.1 MGP_CBAJ_G0031457.1 mouse_genomes_project 7 19288597 19290003 - MGP_CBAJ_P0081628 Apoe protein_coding protein_coding MGP_CBAJ_T0081629.1 MGP_CBAJ_G0031457.1 mouse_genomes_project 7 19288993 19290806 - MGP_CBAJ_P0081629 Apoe protein_coding protein_coding MGP_CBAJ_T0081630.1 MGP_CBAJ_G0031457.1 mouse_genomes_project 7 19289009 19290023 - MGP_CBAJ_P0081630 Apoe protein_coding protein_coding MGP_CBAJ_T0085522.1 MGP_CBAJ_G0032550.1 mouse_genomes_project 7 126508891 126598942 - MGP_CBAJ_P0085522 Rras2 protein_coding protein_coding MGP_CBAJ_T0015591.1 MGP_CBAJ_G0013703.1 mouse_genomes_project 7 61670901 61671793 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0086205.1 MGP_CBAJ_G0032681.1 mouse_genomes_project 7 140952123 140972180 + MGP_CBAJ_P0086205 Sez6l2 protein_coding protein_coding MGP_CBAJ_T0086206.1 MGP_CBAJ_G0032681.1 mouse_genomes_project 7 140952144 140959860 + MGP_CBAJ_P0086206 Sez6l2 protein_coding protein_coding MGP_CBAJ_T0086207.1 MGP_CBAJ_G0032681.1 mouse_genomes_project 7 140952289 140972170 + MGP_CBAJ_P0086207 Sez6l2 protein_coding protein_coding MGP_CBAJ_T0086208.1 MGP_CBAJ_G0032681.1 mouse_genomes_project 7 140952526 140971844 + MGP_CBAJ_P0086208 Sez6l2 protein_coding protein_coding MGP_CBAJ_T0086209.1 MGP_CBAJ_G0032681.1 mouse_genomes_project 7 140955409 140961026 + MGP_CBAJ_P0086209 Sez6l2 protein_coding protein_coding MGP_CBAJ_T0086210.1 MGP_CBAJ_G0032681.1 mouse_genomes_project 7 140969316 140971844 + Sez6l2 protein_coding retained_intron MGP_CBAJ_T0086211.1 MGP_CBAJ_G0032681.1 mouse_genomes_project 7 140969542 140972178 + MGP_CBAJ_P0086211 Sez6l2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0010745.1 MGP_CBAJ_G0008883.1 mouse_genomes_project 7 49190061 49190135 - Mir5121 miRNA miRNA MGP_CBAJ_T0083686.1 MGP_CBAJ_G0031982.1 mouse_genomes_project 7 61258714 61316645 + Cyfip1 protein_coding retained_intron MGP_CBAJ_T0083687.1 MGP_CBAJ_G0031982.1 mouse_genomes_project 7 61259039 61358139 + MGP_CBAJ_P0083687 Cyfip1 protein_coding protein_coding MGP_CBAJ_T0083688.1 MGP_CBAJ_G0031982.1 mouse_genomes_project 7 61259040 61300521 + MGP_CBAJ_P0083688 Cyfip1 protein_coding protein_coding MGP_CBAJ_T0083689.1 MGP_CBAJ_G0031982.1 mouse_genomes_project 7 61259174 61356036 + MGP_CBAJ_P0083689 Cyfip1 protein_coding protein_coding MGP_CBAJ_T0083690.1 MGP_CBAJ_G0031982.1 mouse_genomes_project 7 61259218 61351335 + Cyfip1 protein_coding retained_intron MGP_CBAJ_T0083691.1 MGP_CBAJ_G0031982.1 mouse_genomes_project 7 61259223 61356009 + MGP_CBAJ_P0083691 Cyfip1 protein_coding protein_coding MGP_CBAJ_T0083692.1 MGP_CBAJ_G0031982.1 mouse_genomes_project 7 61294431 61349509 + MGP_CBAJ_P0083692 Cyfip1 protein_coding protein_coding MGP_CBAJ_T0083693.1 MGP_CBAJ_G0031982.1 mouse_genomes_project 7 61320958 61325038 + Cyfip1 protein_coding retained_intron MGP_CBAJ_T0083694.1 MGP_CBAJ_G0031982.1 mouse_genomes_project 7 61321287 61356036 + Cyfip1 protein_coding retained_intron MGP_CBAJ_T0083695.1 MGP_CBAJ_G0031982.1 mouse_genomes_project 7 61322032 61329819 + Cyfip1 protein_coding retained_intron MGP_CBAJ_T0083696.1 MGP_CBAJ_G0031982.1 mouse_genomes_project 7 61333925 61339275 + Cyfip1 protein_coding retained_intron MGP_CBAJ_T0083697.1 MGP_CBAJ_G0031982.1 mouse_genomes_project 7 61354421 61356009 + Cyfip1 protein_coding retained_intron MGP_CBAJ_T0082936.1 MGP_CBAJ_G0031775.1 mouse_genomes_project 7 40914586 40924020 - MGP_CBAJ_P0082936 Pop4 protein_coding protein_coding MGP_CBAJ_T0082937.1 MGP_CBAJ_G0031775.1 mouse_genomes_project 7 40916936 40923924 - MGP_CBAJ_P0082937 Pop4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082938.1 MGP_CBAJ_G0031775.1 mouse_genomes_project 7 40917006 40923966 - MGP_CBAJ_P0082938 Pop4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082939.1 MGP_CBAJ_G0031775.1 mouse_genomes_project 7 40918487 40923946 - Pop4 protein_coding retained_intron MGP_CBAJ_T0082940.1 MGP_CBAJ_G0031775.1 mouse_genomes_project 7 40918692 40923970 - MGP_CBAJ_P0082940 Pop4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082941.1 MGP_CBAJ_G0031775.1 mouse_genomes_project 7 40920972 40923872 - Pop4 protein_coding retained_intron MGP_CBAJ_T0080946.1 MGP_CBAJ_G0031213.1 mouse_genomes_project 7 1793874 1796317 - MGP_CBAJ_P0080946 Tmem86b protein_coding protein_coding MGP_CBAJ_T0080947.1 MGP_CBAJ_G0031213.1 mouse_genomes_project 7 1793876 1796022 - MGP_CBAJ_P0080947 Tmem86b protein_coding protein_coding MGP_CBAJ_T0080948.1 MGP_CBAJ_G0031213.1 mouse_genomes_project 7 1794240 1797257 - MGP_CBAJ_P0080948 Tmem86b protein_coding protein_coding MGP_CBAJ_T0080949.1 MGP_CBAJ_G0031213.1 mouse_genomes_project 7 1794438 1796171 - MGP_CBAJ_P0080949 Tmem86b protein_coding protein_coding MGP_CBAJ_T0015579.1 MGP_CBAJ_G0013691.1 mouse_genomes_project 7 48193382 48194331 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005160.1 MGP_CBAJ_G0004381.1 mouse_genomes_project 7 88453918 88456227 + Gm44851 antisense antisense MGP_CBAJ_T0084532.1 MGP_CBAJ_G0032183.1 mouse_genomes_project 7 102472703 102534593 + MGP_CBAJ_P0084532 Prcp protein_coding protein_coding MGP_CBAJ_T0082752.1 MGP_CBAJ_G0031743.1 mouse_genomes_project 7 36158575 36187302 - MGP_CBAJ_P0082752 Wtip protein_coding protein_coding MGP_CBAJ_T0082753.1 MGP_CBAJ_G0031743.1 mouse_genomes_project 7 36158895 36181122 - Wtip protein_coding processed_transcript MGP_CBAJ_T0082754.1 MGP_CBAJ_G0031743.1 mouse_genomes_project 7 36158946 36167782 - Wtip protein_coding retained_intron MGP_CBAJ_T0082755.1 MGP_CBAJ_G0031743.1 mouse_genomes_project 7 36158956 36186852 - MGP_CBAJ_P0082755 Wtip protein_coding nonsense_mediated_decay MGP_CBAJ_T0084266.1 MGP_CBAJ_G0032090.1 mouse_genomes_project 7 89015526 89028935 - MGP_CBAJ_P0084266 Wdr73 protein_coding protein_coding MGP_CBAJ_T0084267.1 MGP_CBAJ_G0032090.1 mouse_genomes_project 7 89015527 89028898 - Wdr73 protein_coding retained_intron MGP_CBAJ_T0084268.1 MGP_CBAJ_G0032090.1 mouse_genomes_project 7 89015527 89028898 - Wdr73 protein_coding retained_intron MGP_CBAJ_T0084269.1 MGP_CBAJ_G0032090.1 mouse_genomes_project 7 89016062 89028900 - Wdr73 protein_coding retained_intron MGP_CBAJ_T0084270.1 MGP_CBAJ_G0032090.1 mouse_genomes_project 7 89017797 89028885 - Wdr73 protein_coding processed_transcript MGP_CBAJ_T0084271.1 MGP_CBAJ_G0032090.1 mouse_genomes_project 7 89017861 89028886 - MGP_CBAJ_P0084271 Wdr73 protein_coding protein_coding MGP_CBAJ_T0084272.1 MGP_CBAJ_G0032090.1 mouse_genomes_project 7 89017862 89028385 - Wdr73 protein_coding processed_transcript MGP_CBAJ_T0084273.1 MGP_CBAJ_G0032090.1 mouse_genomes_project 7 89018501 89028170 - Wdr73 protein_coding processed_transcript MGP_CBAJ_T0084274.1 MGP_CBAJ_G0032090.1 mouse_genomes_project 7 89022737 89028910 - Wdr73 protein_coding processed_transcript MGP_CBAJ_T0084275.1 MGP_CBAJ_G0032090.1 mouse_genomes_project 7 89028338 89028898 - Wdr73 protein_coding processed_transcript MGP_CBAJ_T0084683.1 MGP_CBAJ_G0032215.1 mouse_genomes_project 7 109685173 109695233 - MGP_CBAJ_P0084683 Serpinh1 protein_coding unknown_likely_coding MGP_CBAJ_T0015530.1 MGP_CBAJ_G0013642.1 mouse_genomes_project 7 31646955 31648653 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0082629.1 MGP_CBAJ_G0031717.1 mouse_genomes_project 7 32342266 32346394 - MGP_CBAJ_P0082629 Ffar1 protein_coding protein_coding MGP_CBAJ_T0008784.1 MGP_CBAJ_G0007085.1 mouse_genomes_project 7 71837922 71871852 + BC046251 lincRNA lincRNA MGP_CBAJ_T0008929.1 MGP_CBAJ_G0007177.1 mouse_genomes_project 7 141358557 141364300 + lincRNA lincRNA MGP_CBAJ_T0008930.1 MGP_CBAJ_G0007177.1 mouse_genomes_project 7 141359043 141364712 + lincRNA lincRNA MGP_CBAJ_T0085358.1 MGP_CBAJ_G0032513.1 mouse_genomes_project 7 121492121 121497925 + MGP_CBAJ_P0085358 Rpl27a protein_coding protein_coding MGP_CBAJ_T0085359.1 MGP_CBAJ_G0032513.1 mouse_genomes_project 7 121492170 121496711 + Rpl27a protein_coding retained_intron MGP_CBAJ_T0085360.1 MGP_CBAJ_G0032513.1 mouse_genomes_project 7 121492173 121493154 + Rpl27a protein_coding retained_intron MGP_CBAJ_T0085361.1 MGP_CBAJ_G0032513.1 mouse_genomes_project 7 121492187 121497324 + Rpl27a protein_coding retained_intron MGP_CBAJ_T0085362.1 MGP_CBAJ_G0032513.1 mouse_genomes_project 7 121492194 121493572 + MGP_CBAJ_P0085362 Rpl27a protein_coding nonsense_mediated_decay MGP_CBAJ_T0085363.1 MGP_CBAJ_G0032513.1 mouse_genomes_project 7 121492244 121492913 + Rpl27a protein_coding retained_intron MGP_CBAJ_T0015455.1 MGP_CBAJ_G0013567.1 mouse_genomes_project 7 1123484 1123883 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0081034.1 MGP_CBAJ_G0031237.1 mouse_genomes_project 7 2261770 2277226 + MGP_CBAJ_P0081034 Zfp865 protein_coding protein_coding MGP_CBAJ_T0082655.1 MGP_CBAJ_G0031722.1 mouse_genomes_project 7 32467331 32468055 - protein_coding processed_transcript MGP_CBAJ_T0082382.1 MGP_CBAJ_G0031660.1 mouse_genomes_project 7 31184747 31207695 - MGP_CBAJ_P0082382 Zfp27 protein_coding protein_coding MGP_CBAJ_T0082383.1 MGP_CBAJ_G0031660.1 mouse_genomes_project 7 31185129 31196526 - MGP_CBAJ_P0082383 Zfp27 protein_coding protein_coding MGP_CBAJ_T0082384.1 MGP_CBAJ_G0031660.1 mouse_genomes_project 7 31185130 31207227 - MGP_CBAJ_P0082384 Zfp27 protein_coding protein_coding MGP_CBAJ_T0082385.1 MGP_CBAJ_G0031660.1 mouse_genomes_project 7 31185130 31207655 - MGP_CBAJ_P0082385 Zfp27 protein_coding protein_coding MGP_CBAJ_T0082386.1 MGP_CBAJ_G0031660.1 mouse_genomes_project 7 31185493 31191481 - MGP_CBAJ_P0082386 Zfp27 protein_coding protein_coding MGP_CBAJ_T0082387.1 MGP_CBAJ_G0031660.1 mouse_genomes_project 7 31196274 31207183 - Zfp27 protein_coding processed_transcript MGP_CBAJ_T0085123.1 MGP_CBAJ_G0032391.1 mouse_genomes_project 7 115842833 115843797 + MGP_CBAJ_P0085123 Olfr661 protein_coding protein_coding MGP_CBAJ_T0011577.1 MGP_CBAJ_G0009715.1 mouse_genomes_project 7 159210744 159210968 + Gm27539 misc_RNA misc_RNA MGP_CBAJ_T0002257.1 MGP_CBAJ_G0002171.1 mouse_genomes_project 7 135633438 135634454 - TEC TEC MGP_CBAJ_T0015615.1 MGP_CBAJ_G0013727.1 mouse_genomes_project 7 82731452 82731656 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002209.1 MGP_CBAJ_G0002124.1 mouse_genomes_project 7 70708906 70709378 + TEC TEC MGP_CBAJ_T0005149.1 MGP_CBAJ_G0004374.1 mouse_genomes_project 7 86314950 86317155 + Gm9885 antisense antisense MGP_CBAJ_T0005150.1 MGP_CBAJ_G0004374.1 mouse_genomes_project 7 86314950 86317159 + Gm9885 antisense antisense MGP_CBAJ_T0081008.1 MGP_CBAJ_G0031226.1 mouse_genomes_project 7 2026803 2037306 - MGP_CBAJ_P0081008 Shisa7 protein_coding protein_coding MGP_CBAJ_T0081009.1 MGP_CBAJ_G0031226.1 mouse_genomes_project 7 2026804 2045802 - MGP_CBAJ_P0081009 Shisa7 protein_coding protein_coding MGP_CBAJ_T0081010.1 MGP_CBAJ_G0031226.1 mouse_genomes_project 7 2029279 2045802 - MGP_CBAJ_P0081010 Shisa7 protein_coding protein_coding MGP_CBAJ_T0081011.1 MGP_CBAJ_G0031226.1 mouse_genomes_project 7 2031429 2032381 - Shisa7 protein_coding retained_intron MGP_CBAJ_T0081012.1 MGP_CBAJ_G0031226.1 mouse_genomes_project 7 2032644 2035647 - Shisa7 protein_coding retained_intron MGP_CBAJ_T0102116.1 MGP_CBAJ_G0040145.1 mouse_genomes_project 7 35804747 35806024 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0102112.1 MGP_CBAJ_G0040141.1 mouse_genomes_project 7 35507873 35509059 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085274.1 MGP_CBAJ_G0032452.1 mouse_genomes_project 7 118600432 118604787 + MGP_CBAJ_P0085274 Olfr1532-ps1 protein_coding protein_coding MGP_CBAJ_T0085130.1 MGP_CBAJ_G0032397.1 mouse_genomes_project 7 116065961 116066912 + MGP_CBAJ_P0085130 Olfr665 protein_coding protein_coding MGP_CBAJ_T0011564.1 MGP_CBAJ_G0009702.1 mouse_genomes_project 7 100488851 100489059 - Gm27660 misc_RNA misc_RNA MGP_CBAJ_T0102057.1 MGP_CBAJ_G0040087.1 mouse_genomes_project 7 8479511 8480373 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0082409.1 MGP_CBAJ_G0031669.1 mouse_genomes_project 7 31449311 31460313 + Zfp260 protein_coding processed_transcript MGP_CBAJ_T0082410.1 MGP_CBAJ_G0031669.1 mouse_genomes_project 7 31449328 31463644 + MGP_CBAJ_P0082410 Zfp260 protein_coding protein_coding MGP_CBAJ_T0082411.1 MGP_CBAJ_G0031669.1 mouse_genomes_project 7 31449696 31456140 + Zfp260 protein_coding retained_intron MGP_CBAJ_T0082412.1 MGP_CBAJ_G0031669.1 mouse_genomes_project 7 31449703 31460781 + MGP_CBAJ_P0082412 Zfp260 protein_coding protein_coding MGP_CBAJ_T0082413.1 MGP_CBAJ_G0031669.1 mouse_genomes_project 7 31449712 31463641 + Zfp260 protein_coding processed_transcript MGP_CBAJ_T0082414.1 MGP_CBAJ_G0031669.1 mouse_genomes_project 7 31449719 31463636 + MGP_CBAJ_P0082414 Zfp260 protein_coding protein_coding MGP_CBAJ_T0082415.1 MGP_CBAJ_G0031669.1 mouse_genomes_project 7 31454177 31456123 + Zfp260 protein_coding retained_intron MGP_CBAJ_T0086810.1 MGP_CBAJ_G0032805.1 mouse_genomes_project 7 150659173 150755948 + MGP_CBAJ_P0086810 Ptpre protein_coding protein_coding MGP_CBAJ_T0082421.1 MGP_CBAJ_G0031672.1 mouse_genomes_project 7 31532252 31542575 + MGP_CBAJ_P0082421 Gm5113 protein_coding protein_coding MGP_CBAJ_T0082320.1 MGP_CBAJ_G0031644.1 mouse_genomes_project 7 30315353 30319067 + MGP_CBAJ_P0082320 Ggn protein_coding protein_coding MGP_CBAJ_T0082321.1 MGP_CBAJ_G0031644.1 mouse_genomes_project 7 30315523 30319046 + MGP_CBAJ_P0082321 Ggn protein_coding protein_coding MGP_CBAJ_T0085613.1 MGP_CBAJ_G0032565.1 mouse_genomes_project 7 131004283 131016078 - MGP_CBAJ_P0085613 Rps15a protein_coding protein_coding MGP_CBAJ_T0085614.1 MGP_CBAJ_G0032565.1 mouse_genomes_project 7 131004289 131015152 - MGP_CBAJ_P0085614 Rps15a protein_coding protein_coding MGP_CBAJ_T0085615.1 MGP_CBAJ_G0032565.1 mouse_genomes_project 7 131008956 131015567 - MGP_CBAJ_P0085615 Rps15a protein_coding protein_coding MGP_CBAJ_T0085616.1 MGP_CBAJ_G0032565.1 mouse_genomes_project 7 131009061 131015450 - MGP_CBAJ_P0085616 Rps15a protein_coding protein_coding MGP_CBAJ_T0085617.1 MGP_CBAJ_G0032565.1 mouse_genomes_project 7 131009555 131015124 - Rps15a protein_coding retained_intron MGP_CBAJ_T0085618.1 MGP_CBAJ_G0032565.1 mouse_genomes_project 7 131009890 131016019 - MGP_CBAJ_P0085618 Rps15a protein_coding protein_coding MGP_CBAJ_T0085619.1 MGP_CBAJ_G0032565.1 mouse_genomes_project 7 131014680 131016018 - MGP_CBAJ_P0085619 Rps15a protein_coding protein_coding MGP_CBAJ_T0081468.1 MGP_CBAJ_G0031413.1 mouse_genomes_project 7 18384103 18433215 + MGP_CBAJ_P0081468 protein_coding protein_coding MGP_CBAJ_T0002254.1 MGP_CBAJ_G0002168.1 mouse_genomes_project 7 134583530 134584162 - TEC TEC MGP_CBAJ_T0099514.1 MGP_CBAJ_G0037769.1 mouse_genomes_project 7 122029946 122030087 + Gm23100 snRNA snRNA MGP_CBAJ_T0086937.1 MGP_CBAJ_G0032837.1 mouse_genomes_project 7 155651621 155655865 - MGP_CBAJ_P0086937 Sprn protein_coding protein_coding MGP_CBAJ_T0086938.1 MGP_CBAJ_G0032837.1 mouse_genomes_project 7 155651957 155654535 - Sprn protein_coding processed_transcript MGP_CBAJ_T0081650.1 MGP_CBAJ_G0031462.1 mouse_genomes_project 7 19428039 19430700 - MGP_CBAJ_P0081650 Bcl3 protein_coding protein_coding MGP_CBAJ_T0081651.1 MGP_CBAJ_G0031462.1 mouse_genomes_project 7 19428039 19442433 - MGP_CBAJ_P0081651 Bcl3 protein_coding protein_coding MGP_CBAJ_T0081652.1 MGP_CBAJ_G0031462.1 mouse_genomes_project 7 19430695 19431468 - Bcl3 protein_coding retained_intron MGP_CBAJ_T0081653.1 MGP_CBAJ_G0031462.1 mouse_genomes_project 7 19430927 19432412 - Bcl3 protein_coding retained_intron MGP_CBAJ_T0081654.1 MGP_CBAJ_G0031462.1 mouse_genomes_project 7 19431073 19435698 - Bcl3 protein_coding processed_transcript MGP_CBAJ_T0081655.1 MGP_CBAJ_G0031462.1 mouse_genomes_project 7 19431164 19441820 - MGP_CBAJ_P0081655 Bcl3 protein_coding protein_coding MGP_CBAJ_T0081656.1 MGP_CBAJ_G0031462.1 mouse_genomes_project 7 19431973 19442433 - Bcl3 protein_coding processed_transcript MGP_CBAJ_T0015594.1 MGP_CBAJ_G0013706.1 mouse_genomes_project 7 62357567 62357828 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0081889.1 MGP_CBAJ_G0031535.1 mouse_genomes_project 7 25558816 25574782 - MGP_CBAJ_P0081889 Lipe protein_coding protein_coding MGP_CBAJ_T0081890.1 MGP_CBAJ_G0031535.1 mouse_genomes_project 7 25558828 25577869 - MGP_CBAJ_P0081890 Lipe protein_coding protein_coding MGP_CBAJ_T0081891.1 MGP_CBAJ_G0031535.1 mouse_genomes_project 7 25562326 25564100 - MGP_CBAJ_P0081891 Lipe protein_coding nonsense_mediated_decay MGP_CBAJ_T0081892.1 MGP_CBAJ_G0031535.1 mouse_genomes_project 7 25562347 25562982 - Lipe protein_coding retained_intron MGP_CBAJ_T0081893.1 MGP_CBAJ_G0031535.1 mouse_genomes_project 7 25567734 25569651 - MGP_CBAJ_P0081893 Lipe protein_coding protein_coding MGP_CBAJ_T0081894.1 MGP_CBAJ_G0031535.1 mouse_genomes_project 7 25576617 25577868 - MGP_CBAJ_P0081894 Lipe protein_coding protein_coding MGP_CBAJ_T0085321.1 MGP_CBAJ_G0032492.1 mouse_genomes_project 7 120301374 120302367 + MGP_CBAJ_P0085321 Olfr498 protein_coding protein_coding MGP_CBAJ_T0085011.1 MGP_CBAJ_G0032307.1 mouse_genomes_project 7 113997573 114053913 + MGP_CBAJ_P0085011 protein_coding protein_coding MGP_CBAJ_T0015643.1 MGP_CBAJ_G0013755.1 mouse_genomes_project 7 107711550 107712258 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018147.1 MGP_CBAJ_G0015425.1 mouse_genomes_project 7 111955378 111963886 - Gm20476 processed_transcript processed_transcript MGP_CBAJ_T0008695.1 MGP_CBAJ_G0007013.1 mouse_genomes_project 7 836532 840528 - lincRNA lincRNA MGP_CBAJ_T0085004.1 MGP_CBAJ_G0032301.1 mouse_genomes_project 7 113867130 113868171 + MGP_CBAJ_P0085004 Olfr574 protein_coding protein_coding MGP_CBAJ_T0081095.1 MGP_CBAJ_G0031266.1 mouse_genomes_project 7 3870794 3871739 + MGP_CBAJ_P0081095 Olfr1336 protein_coding protein_coding MGP_CBAJ_T0085008.1 MGP_CBAJ_G0032304.1 mouse_genomes_project 7 113894044 113894983 - MGP_CBAJ_P0085008 Olfr577 protein_coding protein_coding MGP_CBAJ_T0101178.1 MGP_CBAJ_G0039349.1 mouse_genomes_project 7 42296859 42297204 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101179.1 MGP_CBAJ_G0039349.1 mouse_genomes_project 7 42297138 42300455 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0085730.1 MGP_CBAJ_G0032592.1 mouse_genomes_project 7 133023375 133049340 + MGP_CBAJ_P0085730 Lyrm1 protein_coding protein_coding MGP_CBAJ_T0085731.1 MGP_CBAJ_G0032592.1 mouse_genomes_project 7 133023381 133048871 + MGP_CBAJ_P0085731 Lyrm1 protein_coding protein_coding MGP_CBAJ_T0085732.1 MGP_CBAJ_G0032592.1 mouse_genomes_project 7 133023806 133049336 + MGP_CBAJ_P0085732 Lyrm1 protein_coding protein_coding MGP_CBAJ_T0085733.1 MGP_CBAJ_G0032592.1 mouse_genomes_project 7 133027632 133049342 + MGP_CBAJ_P0085733 Lyrm1 protein_coding protein_coding MGP_CBAJ_T0010750.1 MGP_CBAJ_G0008888.1 mouse_genomes_project 7 59249337 59249445 - Gm27921 miRNA miRNA MGP_CBAJ_T0008855.1 MGP_CBAJ_G0007131.1 mouse_genomes_project 7 91212211 91222270 + 1700010L04Rik lincRNA lincRNA MGP_CBAJ_T0008856.1 MGP_CBAJ_G0007131.1 mouse_genomes_project 7 91218677 91222269 + 1700010L04Rik lincRNA lincRNA MGP_CBAJ_T0008857.1 MGP_CBAJ_G0007131.1 mouse_genomes_project 7 91218687 91221825 + 1700010L04Rik lincRNA lincRNA MGP_CBAJ_T0081535.1 MGP_CBAJ_G0031432.1 mouse_genomes_project 7 18780623 18795482 - MGP_CBAJ_P0081535 Vasp protein_coding protein_coding MGP_CBAJ_T0081536.1 MGP_CBAJ_G0031432.1 mouse_genomes_project 7 18781278 18781826 - Vasp protein_coding retained_intron MGP_CBAJ_T0081537.1 MGP_CBAJ_G0031432.1 mouse_genomes_project 7 18784358 18784774 - Vasp protein_coding processed_transcript MGP_CBAJ_T0081538.1 MGP_CBAJ_G0031432.1 mouse_genomes_project 7 18784559 18790213 - Vasp protein_coding processed_transcript MGP_CBAJ_T0084482.1 MGP_CBAJ_G0032170.1 mouse_genomes_project 7 99359833 99447041 + MGP_CBAJ_P0084482 Picalm protein_coding protein_coding MGP_CBAJ_T0084483.1 MGP_CBAJ_G0032170.1 mouse_genomes_project 7 99360174 99446909 + MGP_CBAJ_P0084483 Picalm protein_coding unknown_likely_coding MGP_CBAJ_T0083662.1 MGP_CBAJ_G0031978.1 mouse_genomes_project 7 57035705 57042096 - MGP_CBAJ_P0083662 1700015G11Rik protein_coding protein_coding MGP_CBAJ_T0083663.1 MGP_CBAJ_G0031978.1 mouse_genomes_project 7 57035707 57042071 - MGP_CBAJ_P0083663 1700015G11Rik protein_coding protein_coding MGP_CBAJ_T0083664.1 MGP_CBAJ_G0031978.1 mouse_genomes_project 7 57035709 57042063 - MGP_CBAJ_P0083664 1700015G11Rik protein_coding protein_coding MGP_CBAJ_T0083665.1 MGP_CBAJ_G0031978.1 mouse_genomes_project 7 57035712 57042050 - MGP_CBAJ_P0083665 1700015G11Rik protein_coding protein_coding MGP_CBAJ_T0083573.1 MGP_CBAJ_G0031945.1 mouse_genomes_project 7 51231937 51265328 - MGP_CBAJ_P0083573 Tsg101 protein_coding protein_coding MGP_CBAJ_T0083574.1 MGP_CBAJ_G0031945.1 mouse_genomes_project 7 51232015 51234057 - Tsg101 protein_coding processed_transcript MGP_CBAJ_T0083575.1 MGP_CBAJ_G0031945.1 mouse_genomes_project 7 51246498 51259770 - MGP_CBAJ_P0083575 Tsg101 protein_coding protein_coding MGP_CBAJ_T0083576.1 MGP_CBAJ_G0031945.1 mouse_genomes_project 7 51252062 51254519 - Tsg101 protein_coding retained_intron MGP_CBAJ_T0083577.1 MGP_CBAJ_G0031945.1 mouse_genomes_project 7 51252524 51265296 - MGP_CBAJ_P0083577 Tsg101 protein_coding protein_coding MGP_CBAJ_T0008906.1 MGP_CBAJ_G0007164.1 mouse_genomes_project 7 138183833 138201576 - Gm15339 lincRNA lincRNA MGP_CBAJ_T0080883.1 MGP_CBAJ_G0031202.1 mouse_genomes_project 7 1383294 1388985 + MGP_CBAJ_P0080883 Lilra5 protein_coding protein_coding MGP_CBAJ_T0081324.1 MGP_CBAJ_G0031363.1 mouse_genomes_project 7 15114152 15132337 - MGP_CBAJ_P0081324 C5ar2 protein_coding protein_coding MGP_CBAJ_T0081325.1 MGP_CBAJ_G0031363.1 mouse_genomes_project 7 15114152 15134332 - MGP_CBAJ_P0081325 C5ar2 protein_coding protein_coding MGP_CBAJ_T0018179.1 MGP_CBAJ_G0015443.1 mouse_genomes_project 7 157672184 157672980 - processed_transcript processed_transcript MGP_CBAJ_T0097833.1 MGP_CBAJ_G0036106.1 mouse_genomes_project 7 90285826 90286440 + pseudogene pseudogene MGP_CBAJ_T0081052.1 MGP_CBAJ_G0031248.1 mouse_genomes_project 7 2416561 2417208 - MGP_CBAJ_P0081052 protein_coding protein_coding MGP_CBAJ_T0015510.1 MGP_CBAJ_G0013622.1 mouse_genomes_project 7 24695752 24696065 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0087121.1 MGP_CBAJ_G0032897.1 mouse_genomes_project 7 157130784 157133766 - MGP_CBAJ_P0087121 Cend1 protein_coding protein_coding MGP_CBAJ_T0087122.1 MGP_CBAJ_G0032897.1 mouse_genomes_project 7 157130784 157133832 - MGP_CBAJ_P0087122 Cend1 protein_coding protein_coding MGP_CBAJ_T0087123.1 MGP_CBAJ_G0032897.1 mouse_genomes_project 7 157130789 157133759 - MGP_CBAJ_P0087123 Cend1 protein_coding protein_coding MGP_CBAJ_T0087124.1 MGP_CBAJ_G0032897.1 mouse_genomes_project 7 157130789 157133692 - MGP_CBAJ_P0087124 Cend1 protein_coding protein_coding MGP_CBAJ_T0081942.1 MGP_CBAJ_G0031547.1 mouse_genomes_project 7 25918738 25926721 - MGP_CBAJ_P0081942 Ccdc97 protein_coding protein_coding MGP_CBAJ_T0081943.1 MGP_CBAJ_G0031547.1 mouse_genomes_project 7 25920567 25923739 - Ccdc97 protein_coding processed_transcript MGP_CBAJ_T0081944.1 MGP_CBAJ_G0031547.1 mouse_genomes_project 7 25921766 25926636 - Ccdc97 protein_coding retained_intron MGP_CBAJ_T0081945.1 MGP_CBAJ_G0031547.1 mouse_genomes_project 7 25922454 25926678 - MGP_CBAJ_P0081945 Ccdc97 protein_coding protein_coding MGP_CBAJ_T0081946.1 MGP_CBAJ_G0031547.1 mouse_genomes_project 7 25922542 25924027 - Ccdc97 protein_coding retained_intron MGP_CBAJ_T0081947.1 MGP_CBAJ_G0031547.1 mouse_genomes_project 7 25923536 25926639 - Ccdc97 protein_coding processed_transcript MGP_CBAJ_T0081948.1 MGP_CBAJ_G0031547.1 mouse_genomes_project 7 25923536 25926624 - Ccdc97 protein_coding processed_transcript MGP_CBAJ_T0081949.1 MGP_CBAJ_G0031547.1 mouse_genomes_project 7 25923773 25926688 - Ccdc97 protein_coding processed_transcript MGP_CBAJ_T0081950.1 MGP_CBAJ_G0031547.1 mouse_genomes_project 7 25924538 25926700 - Ccdc97 protein_coding processed_transcript MGP_CBAJ_T0005140.1 MGP_CBAJ_G0004366.1 mouse_genomes_project 7 62942518 62966232 + Gm9962 antisense antisense MGP_CBAJ_T0081933.1 MGP_CBAJ_G0031545.1 mouse_genomes_project 7 25877485 25886000 + MGP_CBAJ_P0081933 B9d2 protein_coding protein_coding MGP_CBAJ_T0081934.1 MGP_CBAJ_G0031545.1 mouse_genomes_project 7 25877543 25880354 + MGP_CBAJ_P0081934 B9d2 protein_coding protein_coding MGP_CBAJ_T0081935.1 MGP_CBAJ_G0031545.1 mouse_genomes_project 7 25877561 25880125 + MGP_CBAJ_P0081935 B9d2 protein_coding protein_coding MGP_CBAJ_T0081936.1 MGP_CBAJ_G0031545.1 mouse_genomes_project 7 25877863 25886000 + MGP_CBAJ_P0081936 B9d2 protein_coding protein_coding MGP_CBAJ_T0002213.1 MGP_CBAJ_G0002128.1 mouse_genomes_project 7 80616725 80618369 + TEC TEC MGP_CBAJ_T0086502.1 MGP_CBAJ_G0032741.1 mouse_genomes_project 7 142304583 142374775 + MGP_CBAJ_P0086502 protein_coding protein_coding MGP_CBAJ_T0086503.1 MGP_CBAJ_G0032741.1 mouse_genomes_project 7 142304612 142374774 + MGP_CBAJ_P0086503 protein_coding protein_coding MGP_CBAJ_T0086504.1 MGP_CBAJ_G0032741.1 mouse_genomes_project 7 142304622 142373374 + MGP_CBAJ_P0086504 protein_coding protein_coding MGP_CBAJ_T0086506.1 MGP_CBAJ_G0032741.1 mouse_genomes_project 7 142304626 142373815 + MGP_CBAJ_P0086506 protein_coding protein_coding MGP_CBAJ_T0086507.1 MGP_CBAJ_G0032741.1 mouse_genomes_project 7 142304671 142312826 + protein_coding processed_transcript MGP_CBAJ_T0086508.1 MGP_CBAJ_G0032741.1 mouse_genomes_project 7 142304686 142313068 + MGP_CBAJ_P0086508 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081659.1 MGP_CBAJ_G0031465.1 mouse_genomes_project 7 19519226 19534943 - MGP_CBAJ_P0081659 Ceacam19 protein_coding protein_coding MGP_CBAJ_T0083468.1 MGP_CBAJ_G0031920.1 mouse_genomes_project 7 50020384 50028998 - MGP_CBAJ_P0083468 Kcnj14 protein_coding protein_coding MGP_CBAJ_T0082327.1 MGP_CBAJ_G0031648.1 mouse_genomes_project 7 30410019 30419218 + MGP_CBAJ_P0082327 Yif1b protein_coding protein_coding MGP_CBAJ_T0082328.1 MGP_CBAJ_G0031648.1 mouse_genomes_project 7 30410043 30419218 + MGP_CBAJ_P0082328 Yif1b protein_coding protein_coding MGP_CBAJ_T0082329.1 MGP_CBAJ_G0031648.1 mouse_genomes_project 7 30410059 30416530 + MGP_CBAJ_P0082329 Yif1b protein_coding protein_coding MGP_CBAJ_T0082330.1 MGP_CBAJ_G0031648.1 mouse_genomes_project 7 30410142 30419282 + MGP_CBAJ_P0082330 Yif1b protein_coding protein_coding MGP_CBAJ_T0082331.1 MGP_CBAJ_G0031648.1 mouse_genomes_project 7 30410163 30417683 + Yif1b protein_coding processed_transcript MGP_CBAJ_T0008750.1 MGP_CBAJ_G0007060.1 mouse_genomes_project 7 42679974 42680545 - lincRNA lincRNA MGP_CBAJ_T0085995.1 MGP_CBAJ_G0032650.1 mouse_genomes_project 7 140367377 140387657 + Rabep2 protein_coding retained_intron MGP_CBAJ_T0085996.1 MGP_CBAJ_G0032650.1 mouse_genomes_project 7 140367717 140377896 + Rabep2 protein_coding retained_intron MGP_CBAJ_T0085997.1 MGP_CBAJ_G0032650.1 mouse_genomes_project 7 140367750 140387665 + MGP_CBAJ_P0085997 Rabep2 protein_coding protein_coding MGP_CBAJ_T0085998.1 MGP_CBAJ_G0032650.1 mouse_genomes_project 7 140368000 140380179 + MGP_CBAJ_P0085998 Rabep2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085999.1 MGP_CBAJ_G0032650.1 mouse_genomes_project 7 140368046 140380170 + MGP_CBAJ_P0085999 Rabep2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086000.1 MGP_CBAJ_G0032650.1 mouse_genomes_project 7 140379938 140380502 + Rabep2 protein_coding retained_intron MGP_CBAJ_T0086001.1 MGP_CBAJ_G0032650.1 mouse_genomes_project 7 140382055 140386440 + Rabep2 protein_coding retained_intron MGP_CBAJ_T0086002.1 MGP_CBAJ_G0032650.1 mouse_genomes_project 7 140386555 140391001 + Rabep2 protein_coding retained_intron MGP_CBAJ_T0086295.1 MGP_CBAJ_G0032699.1 mouse_genomes_project 7 141294627 141310330 + MGP_CBAJ_P0086295 Zfp771 protein_coding protein_coding MGP_CBAJ_T0086296.1 MGP_CBAJ_G0032699.1 mouse_genomes_project 7 141298638 141299249 + Zfp771 protein_coding processed_transcript MGP_CBAJ_T0086297.1 MGP_CBAJ_G0032699.1 mouse_genomes_project 7 141298724 141309399 + MGP_CBAJ_P0086297 Zfp771 protein_coding protein_coding MGP_CBAJ_T0081049.1 MGP_CBAJ_G0031246.1 mouse_genomes_project 7 2357461 2364588 - MGP_CBAJ_P0081049 Rfpl4 protein_coding protein_coding MGP_CBAJ_T0081050.1 MGP_CBAJ_G0031246.1 mouse_genomes_project 7 2357461 2364588 - MGP_CBAJ_P0081050 Rfpl4 protein_coding protein_coding MGP_CBAJ_T0005209.1 MGP_CBAJ_G0004414.1 mouse_genomes_project 7 140603281 140604333 - 2510046G10Rik antisense antisense MGP_CBAJ_T0005210.1 MGP_CBAJ_G0004414.1 mouse_genomes_project 7 140603961 140604309 - 2510046G10Rik antisense antisense MGP_CBAJ_T0100745.1 MGP_CBAJ_G0039000.1 mouse_genomes_project 7 75567390 75567527 - Gm23795 snoRNA snoRNA MGP_CBAJ_T0082590.1 MGP_CBAJ_G0031707.1 mouse_genomes_project 7 32101660 32102544 - MGP_CBAJ_P0082590 Pmis2 protein_coding protein_coding MGP_CBAJ_T0082591.1 MGP_CBAJ_G0031707.1 mouse_genomes_project 7 32101695 32102539 - Pmis2 protein_coding processed_transcript MGP_CBAJ_T0084734.1 MGP_CBAJ_G0032232.1 mouse_genomes_project 7 110695782 110751363 + MGP_CBAJ_P0084734 Pgm2l1 protein_coding protein_coding MGP_CBAJ_T0084735.1 MGP_CBAJ_G0032232.1 mouse_genomes_project 7 110696076 110753486 + MGP_CBAJ_P0084735 Pgm2l1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084736.1 MGP_CBAJ_G0032232.1 mouse_genomes_project 7 110696098 110754947 + MGP_CBAJ_P0084736 Pgm2l1 protein_coding protein_coding MGP_CBAJ_T0102132.1 MGP_CBAJ_G0040161.1 mouse_genomes_project 7 47776118 47778359 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0008703.1 MGP_CBAJ_G0007019.1 mouse_genomes_project 7 16336580 16403598 - lincRNA lincRNA MGP_CBAJ_T0085488.1 MGP_CBAJ_G0032542.1 mouse_genomes_project 7 125002708 125245147 + MGP_CBAJ_P0085488 Tead1 protein_coding protein_coding MGP_CBAJ_T0085489.1 MGP_CBAJ_G0032542.1 mouse_genomes_project 7 125002745 125234993 + MGP_CBAJ_P0085489 Tead1 protein_coding protein_coding MGP_CBAJ_T0085490.1 MGP_CBAJ_G0032542.1 mouse_genomes_project 7 125002898 125173312 + Tead1 protein_coding retained_intron MGP_CBAJ_T0085491.1 MGP_CBAJ_G0032542.1 mouse_genomes_project 7 125071407 125233663 + MGP_CBAJ_P0085491 Tead1 protein_coding protein_coding MGP_CBAJ_T0085492.1 MGP_CBAJ_G0032542.1 mouse_genomes_project 7 125085663 125233663 + MGP_CBAJ_P0085492 Tead1 protein_coding protein_coding MGP_CBAJ_T0085493.1 MGP_CBAJ_G0032542.1 mouse_genomes_project 7 125088646 125136301 + Tead1 protein_coding processed_transcript MGP_CBAJ_T0085494.1 MGP_CBAJ_G0032542.1 mouse_genomes_project 7 125088697 125233663 + MGP_CBAJ_P0085494 Tead1 protein_coding protein_coding MGP_CBAJ_T0085495.1 MGP_CBAJ_G0032542.1 mouse_genomes_project 7 125088742 125233663 + MGP_CBAJ_P0085495 Tead1 protein_coding protein_coding MGP_CBAJ_T0085496.1 MGP_CBAJ_G0032542.1 mouse_genomes_project 7 125088742 125233663 + MGP_CBAJ_P0085496 Tead1 protein_coding protein_coding MGP_CBAJ_T0085497.1 MGP_CBAJ_G0032542.1 mouse_genomes_project 7 125088742 125233663 + MGP_CBAJ_P0085497 Tead1 protein_coding protein_coding MGP_CBAJ_T0085498.1 MGP_CBAJ_G0032542.1 mouse_genomes_project 7 125088795 125193519 + MGP_CBAJ_P0085498 Tead1 protein_coding protein_coding MGP_CBAJ_T0085499.1 MGP_CBAJ_G0032542.1 mouse_genomes_project 7 125088805 125173285 + Tead1 protein_coding retained_intron MGP_CBAJ_T0083072.1 MGP_CBAJ_G0031824.1 mouse_genomes_project 7 47724183 47848157 + MGP_CBAJ_P0083072 protein_coding protein_coding MGP_CBAJ_T0080990.1 MGP_CBAJ_G0031220.1 mouse_genomes_project 7 1945783 1966032 - MGP_CBAJ_P0080990 Fam71e2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080991.1 MGP_CBAJ_G0031220.1 mouse_genomes_project 7 1945786 1966032 - MGP_CBAJ_P0080991 Fam71e2 protein_coding protein_coding MGP_CBAJ_T0010807.1 MGP_CBAJ_G0008945.1 mouse_genomes_project 7 155443830 155443887 - Mir7686 miRNA miRNA MGP_CBAJ_T0084507.1 MGP_CBAJ_G0032177.1 mouse_genomes_project 7 100445594 101988714 + MGP_CBAJ_P0084507 Dlg2 protein_coding protein_coding MGP_CBAJ_T0084508.1 MGP_CBAJ_G0032177.1 mouse_genomes_project 7 100445614 101806275 + Dlg2 protein_coding processed_transcript MGP_CBAJ_T0084509.1 MGP_CBAJ_G0032177.1 mouse_genomes_project 7 100445616 101988714 + MGP_CBAJ_P0084509 Dlg2 protein_coding protein_coding MGP_CBAJ_T0084510.1 MGP_CBAJ_G0032177.1 mouse_genomes_project 7 101100342 101468680 + Dlg2 protein_coding retained_intron MGP_CBAJ_T0084511.1 MGP_CBAJ_G0032177.1 mouse_genomes_project 7 101141010 101988714 + MGP_CBAJ_P0084511 Dlg2 protein_coding protein_coding MGP_CBAJ_T0084512.1 MGP_CBAJ_G0032177.1 mouse_genomes_project 7 101141261 101403385 + Dlg2 protein_coding processed_transcript MGP_CBAJ_T0084513.1 MGP_CBAJ_G0032177.1 mouse_genomes_project 7 101141263 101986327 + MGP_CBAJ_P0084513 Dlg2 protein_coding unknown_likely_coding MGP_CBAJ_T0084514.1 MGP_CBAJ_G0032177.1 mouse_genomes_project 7 101548044 101988714 + MGP_CBAJ_P0084514 Dlg2 protein_coding protein_coding MGP_CBAJ_T0084515.1 MGP_CBAJ_G0032177.1 mouse_genomes_project 7 101690336 101807973 + Dlg2 protein_coding retained_intron MGP_CBAJ_T0084516.1 MGP_CBAJ_G0032177.1 mouse_genomes_project 7 101745721 101988194 + Dlg2 protein_coding processed_transcript MGP_CBAJ_T0084517.1 MGP_CBAJ_G0032177.1 mouse_genomes_project 7 101745925 101970156 + Dlg2 protein_coding processed_transcript MGP_CBAJ_T0008952.1 MGP_CBAJ_G0007194.1 mouse_genomes_project 7 150208799 150217536 - lincRNA lincRNA MGP_CBAJ_T0008953.1 MGP_CBAJ_G0007194.1 mouse_genomes_project 7 150211703 150217536 - lincRNA lincRNA MGP_CBAJ_T0010780.1 MGP_CBAJ_G0008918.1 mouse_genomes_project 7 87918869 87918971 + Gm24541 miRNA miRNA MGP_CBAJ_T0085263.1 MGP_CBAJ_G0032442.1 mouse_genomes_project 7 118411775 118412711 - MGP_CBAJ_P0085263 Olfr698 protein_coding protein_coding MGP_CBAJ_T0015561.1 MGP_CBAJ_G0013673.1 mouse_genomes_project 7 44840811 44841511 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010702.1 MGP_CBAJ_G0008840.1 mouse_genomes_project 7 176245 176307 - Mir292b miRNA miRNA MGP_CBAJ_T0082947.1 MGP_CBAJ_G0031778.1 mouse_genomes_project 7 44480626 44508080 - MGP_CBAJ_P0082947 AI987944 protein_coding protein_coding MGP_CBAJ_T0082948.1 MGP_CBAJ_G0031778.1 mouse_genomes_project 7 44480626 44508028 - MGP_CBAJ_P0082948 AI987944 protein_coding protein_coding MGP_CBAJ_T0082949.1 MGP_CBAJ_G0031778.1 mouse_genomes_project 7 44481359 44508147 - MGP_CBAJ_P0082949 AI987944 protein_coding protein_coding MGP_CBAJ_T0086308.1 MGP_CBAJ_G0032704.1 mouse_genomes_project 7 141466032 141483568 - MGP_CBAJ_P0086308 protein_coding protein_coding MGP_CBAJ_T0086309.1 MGP_CBAJ_G0032704.1 mouse_genomes_project 7 141469658 141471099 - protein_coding retained_intron MGP_CBAJ_T0086312.1 MGP_CBAJ_G0032704.1 mouse_genomes_project 7 141481703 141483568 - MGP_CBAJ_P0086312 protein_coding protein_coding MGP_CBAJ_T0084977.1 MGP_CBAJ_G0032276.1 mouse_genomes_project 7 113341103 113342233 - MGP_CBAJ_P0084977 Olfr543 protein_coding protein_coding MGP_CBAJ_T0102185.1 MGP_CBAJ_G0040214.1 mouse_genomes_project 7 94616261 94616569 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0015509.1 MGP_CBAJ_G0013621.1 mouse_genomes_project 7 24249942 24252702 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0083052.1 MGP_CBAJ_G0031815.1 mouse_genomes_project 7 47484522 47491764 + MGP_CBAJ_P0083052 Klk11 protein_coding protein_coding MGP_CBAJ_T0083053.1 MGP_CBAJ_G0031815.1 mouse_genomes_project 7 47488829 47491454 + Klk11 protein_coding retained_intron MGP_CBAJ_T0083054.1 MGP_CBAJ_G0031815.1 mouse_genomes_project 7 47488829 47491759 + MGP_CBAJ_P0083054 Klk11 protein_coding protein_coding MGP_CBAJ_T0083055.1 MGP_CBAJ_G0031815.1 mouse_genomes_project 7 47488980 47491561 + Klk11 protein_coding processed_transcript MGP_CBAJ_T0083056.1 MGP_CBAJ_G0031815.1 mouse_genomes_project 7 47488980 47491561 + Klk11 protein_coding processed_transcript MGP_CBAJ_T0081217.1 MGP_CBAJ_G0031324.1 mouse_genomes_project 7 11273548 11274499 - MGP_CBAJ_P0081217 Vmn1r86 protein_coding protein_coding MGP_CBAJ_T0015662.1 MGP_CBAJ_G0013774.1 mouse_genomes_project 7 115467561 115468763 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010743.1 MGP_CBAJ_G0008881.1 mouse_genomes_project 7 49060928 49060990 - Mir7054 miRNA miRNA MGP_CBAJ_T0087162.1 MGP_CBAJ_G0032900.1 mouse_genomes_project 7 157151542 157155470 + MGP_CBAJ_P0087162 Rplp2 protein_coding protein_coding MGP_CBAJ_T0087163.1 MGP_CBAJ_G0032900.1 mouse_genomes_project 7 157151803 157152789 + Rplp2 protein_coding retained_intron MGP_CBAJ_T0087164.1 MGP_CBAJ_G0032900.1 mouse_genomes_project 7 157151841 157153200 + Rplp2 protein_coding retained_intron MGP_CBAJ_T0087165.1 MGP_CBAJ_G0032900.1 mouse_genomes_project 7 157151884 157155235 + MGP_CBAJ_P0087165 Rplp2 protein_coding protein_coding MGP_CBAJ_T0087166.1 MGP_CBAJ_G0032900.1 mouse_genomes_project 7 157152022 157155235 + MGP_CBAJ_P0087166 Rplp2 protein_coding protein_coding MGP_CBAJ_T0081051.1 MGP_CBAJ_G0031247.1 mouse_genomes_project 7 2373935 2374948 - MGP_CBAJ_P0081051 Rasl2-9 protein_coding protein_coding MGP_CBAJ_T0086459.1 MGP_CBAJ_G0032734.1 mouse_genomes_project 7 142111345 142117455 + MGP_CBAJ_P0086459 Bckdk protein_coding protein_coding MGP_CBAJ_T0086460.1 MGP_CBAJ_G0032734.1 mouse_genomes_project 7 142111366 142113226 + Bckdk protein_coding retained_intron MGP_CBAJ_T0086461.1 MGP_CBAJ_G0032734.1 mouse_genomes_project 7 142111903 142113435 + MGP_CBAJ_P0086461 Bckdk protein_coding protein_coding MGP_CBAJ_T0086462.1 MGP_CBAJ_G0032734.1 mouse_genomes_project 7 142112025 142115872 + MGP_CBAJ_P0086462 Bckdk protein_coding protein_coding MGP_CBAJ_T0086463.1 MGP_CBAJ_G0032734.1 mouse_genomes_project 7 142112025 142115872 + MGP_CBAJ_P0086463 Bckdk protein_coding protein_coding MGP_CBAJ_T0086464.1 MGP_CBAJ_G0032734.1 mouse_genomes_project 7 142112180 142113647 + MGP_CBAJ_P0086464 Bckdk protein_coding protein_coding MGP_CBAJ_T0086465.1 MGP_CBAJ_G0032734.1 mouse_genomes_project 7 142114503 142115864 + MGP_CBAJ_P0086465 Bckdk protein_coding protein_coding MGP_CBAJ_T0015451.1 MGP_CBAJ_G0013563.1 mouse_genomes_project 7 262936 263816 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0084973.1 MGP_CBAJ_G0032273.1 mouse_genomes_project 7 113062783 113076922 - MGP_CBAJ_P0084973 Rhog protein_coding protein_coding MGP_CBAJ_T0084974.1 MGP_CBAJ_G0032273.1 mouse_genomes_project 7 113062783 113076887 - MGP_CBAJ_P0084974 Rhog protein_coding protein_coding MGP_CBAJ_T0002168.1 MGP_CBAJ_G0002083.1 mouse_genomes_project 7 37240946 37241563 - TEC TEC MGP_CBAJ_T0080763.1 MGP_CBAJ_G0031181.1 mouse_genomes_project 7 408164 441897 + MGP_CBAJ_P0080763 Cacng8 protein_coding protein_coding MGP_CBAJ_T0080764.1 MGP_CBAJ_G0031181.1 mouse_genomes_project 7 412403 441870 + MGP_CBAJ_P0080764 Cacng8 protein_coding protein_coding MGP_CBAJ_T0080765.1 MGP_CBAJ_G0031181.1 mouse_genomes_project 7 412704 413239 + MGP_CBAJ_P0080765 Cacng8 protein_coding protein_coding MGP_CBAJ_T0084174.1 MGP_CBAJ_G0032080.1 mouse_genomes_project 7 88335085 88356742 + MGP_CBAJ_P0084174 Prc1 protein_coding protein_coding MGP_CBAJ_T0084175.1 MGP_CBAJ_G0032080.1 mouse_genomes_project 7 88335086 88356742 + MGP_CBAJ_P0084175 Prc1 protein_coding protein_coding MGP_CBAJ_T0084176.1 MGP_CBAJ_G0032080.1 mouse_genomes_project 7 88335100 88353229 + Prc1 protein_coding retained_intron MGP_CBAJ_T0084177.1 MGP_CBAJ_G0032080.1 mouse_genomes_project 7 88335108 88356067 + MGP_CBAJ_P0084177 Prc1 protein_coding protein_coding MGP_CBAJ_T0084178.1 MGP_CBAJ_G0032080.1 mouse_genomes_project 7 88335109 88344921 + Prc1 protein_coding retained_intron MGP_CBAJ_T0084179.1 MGP_CBAJ_G0032080.1 mouse_genomes_project 7 88335114 88356734 + MGP_CBAJ_P0084179 Prc1 protein_coding protein_coding MGP_CBAJ_T0084180.1 MGP_CBAJ_G0032080.1 mouse_genomes_project 7 88335140 88356737 + MGP_CBAJ_P0084180 Prc1 protein_coding protein_coding MGP_CBAJ_T0084181.1 MGP_CBAJ_G0032080.1 mouse_genomes_project 7 88335148 88345111 + Prc1 protein_coding retained_intron MGP_CBAJ_T0084182.1 MGP_CBAJ_G0032080.1 mouse_genomes_project 7 88344884 88346447 + Prc1 protein_coding retained_intron MGP_CBAJ_T0084183.1 MGP_CBAJ_G0032080.1 mouse_genomes_project 7 88345218 88351364 + MGP_CBAJ_P0084183 Prc1 protein_coding protein_coding MGP_CBAJ_T0084184.1 MGP_CBAJ_G0032080.1 mouse_genomes_project 7 88349868 88356740 + MGP_CBAJ_P0084184 Prc1 protein_coding protein_coding MGP_CBAJ_T0084185.1 MGP_CBAJ_G0032080.1 mouse_genomes_project 7 88351328 88353977 + MGP_CBAJ_P0084185 Prc1 protein_coding protein_coding MGP_CBAJ_T0084186.1 MGP_CBAJ_G0032080.1 mouse_genomes_project 7 88351584 88356000 + MGP_CBAJ_P0084186 Prc1 protein_coding protein_coding MGP_CBAJ_T0084187.1 MGP_CBAJ_G0032080.1 mouse_genomes_project 7 88352790 88354180 + MGP_CBAJ_P0084187 Prc1 protein_coding protein_coding MGP_CBAJ_T0082504.1 MGP_CBAJ_G0031692.1 mouse_genomes_project 7 31895979 31921356 + MGP_CBAJ_P0082504 Prodh2 protein_coding protein_coding MGP_CBAJ_T0082505.1 MGP_CBAJ_G0031692.1 mouse_genomes_project 7 31896015 31916714 + Prodh2 protein_coding processed_transcript MGP_CBAJ_T0082506.1 MGP_CBAJ_G0031692.1 mouse_genomes_project 7 31896015 31914556 + MGP_CBAJ_P0082506 Prodh2 protein_coding protein_coding MGP_CBAJ_T0082507.1 MGP_CBAJ_G0031692.1 mouse_genomes_project 7 31896016 31896645 + Prodh2 protein_coding retained_intron MGP_CBAJ_T0082508.1 MGP_CBAJ_G0031692.1 mouse_genomes_project 7 31896016 31914784 + MGP_CBAJ_P0082508 Prodh2 protein_coding protein_coding MGP_CBAJ_T0082509.1 MGP_CBAJ_G0031692.1 mouse_genomes_project 7 31896038 31914645 + MGP_CBAJ_P0082509 Prodh2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0082510.1 MGP_CBAJ_G0031692.1 mouse_genomes_project 7 31896137 31914852 + MGP_CBAJ_P0082510 Prodh2 protein_coding protein_coding MGP_CBAJ_T0082511.1 MGP_CBAJ_G0031692.1 mouse_genomes_project 7 31914883 31920992 + MGP_CBAJ_P0082511 Prodh2 protein_coding protein_coding MGP_CBAJ_T0005157.1 MGP_CBAJ_G0004379.1 mouse_genomes_project 7 88061400 88078594 - Gm21057 antisense antisense MGP_CBAJ_T0005158.1 MGP_CBAJ_G0004379.1 mouse_genomes_project 7 88077113 88078614 - Gm21057 antisense antisense MGP_CBAJ_T0015568.1 MGP_CBAJ_G0013680.1 mouse_genomes_project 7 46186663 46187174 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002165.1 MGP_CBAJ_G0002080.1 mouse_genomes_project 7 36320223 36321316 - TEC TEC MGP_CBAJ_T0005116.1 MGP_CBAJ_G0004350.1 mouse_genomes_project 7 36773059 36780261 + Gm12781 antisense antisense MGP_CBAJ_T0015681.1 MGP_CBAJ_G0013793.1 mouse_genomes_project 7 136544098 136544609 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0081509.1 MGP_CBAJ_G0031423.1 mouse_genomes_project 7 18586288 18590265 + MGP_CBAJ_P0081509 Six5 protein_coding protein_coding MGP_CBAJ_T0084975.1 MGP_CBAJ_G0032274.1 mouse_genomes_project 7 113100806 113285366 + MGP_CBAJ_P0084975 Stim1 protein_coding protein_coding MGP_CBAJ_T0002224.1 MGP_CBAJ_G0002138.1 mouse_genomes_project 7 82935999 82941139 + TEC TEC MGP_CBAJ_T0005195.1 MGP_CBAJ_G0004405.1 mouse_genomes_project 7 129023610 129024492 + Gm44777 antisense antisense MGP_CBAJ_T0005196.1 MGP_CBAJ_G0004405.1 mouse_genomes_project 7 129023617 129027624 + Gm44777 antisense antisense MGP_CBAJ_T0005197.1 MGP_CBAJ_G0004405.1 mouse_genomes_project 7 129025345 129027944 + Gm44777 antisense antisense MGP_CBAJ_T0015684.1 MGP_CBAJ_G0013796.1 mouse_genomes_project 7 139360590 139361924 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0085031.1 MGP_CBAJ_G0032326.1 mouse_genomes_project 7 114530984 114531944 - MGP_CBAJ_P0085031 Olfr609 protein_coding protein_coding MGP_CBAJ_T0085114.1 MGP_CBAJ_G0032383.1 mouse_genomes_project 7 115693787 115694848 + MGP_CBAJ_P0085114 Olfr652 protein_coding protein_coding MGP_CBAJ_T0085115.1 MGP_CBAJ_G0032383.1 mouse_genomes_project 7 115693867 115694815 + MGP_CBAJ_P0085115 Olfr652 protein_coding protein_coding MGP_CBAJ_T0102065.1 MGP_CBAJ_G0040095.1 mouse_genomes_project 7 9982767 9984012 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0084295.1 MGP_CBAJ_G0032096.1 mouse_genomes_project 7 89422753 89561511 + MGP_CBAJ_P0084295 Pde8a protein_coding protein_coding MGP_CBAJ_T0084296.1 MGP_CBAJ_G0032096.1 mouse_genomes_project 7 89521172 89542286 + Pde8a protein_coding processed_transcript MGP_CBAJ_T0084297.1 MGP_CBAJ_G0032096.1 mouse_genomes_project 7 89532158 89546428 + Pde8a protein_coding processed_transcript MGP_CBAJ_T0008937.1 MGP_CBAJ_G0007183.1 mouse_genomes_project 7 143179599 143317393 + Gm44671 lincRNA lincRNA MGP_CBAJ_T0100766.1 MGP_CBAJ_G0039021.1 mouse_genomes_project 7 129022526 129022613 - Snord14a snoRNA snoRNA MGP_CBAJ_T0083940.1 MGP_CBAJ_G0032031.1 mouse_genomes_project 7 74208007 74239814 - MGP_CBAJ_P0083940 Synm protein_coding protein_coding MGP_CBAJ_T0083941.1 MGP_CBAJ_G0032031.1 mouse_genomes_project 7 74208007 74239814 - MGP_CBAJ_P0083941 Synm protein_coding protein_coding MGP_CBAJ_T0098457.1 MGP_CBAJ_G0036718.1 mouse_genomes_project 7 132592836 132595085 - Gm26967 sense_intronic sense_intronic MGP_CBAJ_T0085015.1 MGP_CBAJ_G0032311.1 mouse_genomes_project 7 114126370 114127324 - MGP_CBAJ_P0085015 Olfr589 protein_coding protein_coding MGP_CBAJ_T0081683.1 MGP_CBAJ_G0031483.1 mouse_genomes_project 7 23852409 23853563 + MGP_CBAJ_P0081683 protein_coding protein_coding MGP_CBAJ_T0008896.1 MGP_CBAJ_G0007157.1 mouse_genomes_project 7 127623358 127659464 + Gm44944 lincRNA lincRNA MGP_CBAJ_T0008897.1 MGP_CBAJ_G0007157.1 mouse_genomes_project 7 127658038 127659753 + Gm44944 lincRNA lincRNA MGP_CBAJ_T0008898.1 MGP_CBAJ_G0007157.1 mouse_genomes_project 7 127659477 127659782 + Gm44944 lincRNA lincRNA MGP_CBAJ_T0083132.1 MGP_CBAJ_G0031835.1 mouse_genomes_project 7 48448985 48455578 - MGP_CBAJ_P0083132 Emc10 protein_coding protein_coding MGP_CBAJ_T0083133.1 MGP_CBAJ_G0031835.1 mouse_genomes_project 7 48449159 48455455 - MGP_CBAJ_P0083133 Emc10 protein_coding protein_coding MGP_CBAJ_T0083134.1 MGP_CBAJ_G0031835.1 mouse_genomes_project 7 48449955 48451065 - Emc10 protein_coding retained_intron MGP_CBAJ_T0083135.1 MGP_CBAJ_G0031835.1 mouse_genomes_project 7 48450781 48455512 - Emc10 protein_coding retained_intron MGP_CBAJ_T0083136.1 MGP_CBAJ_G0031835.1 mouse_genomes_project 7 48451049 48455477 - MGP_CBAJ_P0083136 Emc10 protein_coding protein_coding MGP_CBAJ_T0083137.1 MGP_CBAJ_G0031835.1 mouse_genomes_project 7 48453322 48455446 - Emc10 protein_coding retained_intron MGP_CBAJ_T0008804.1 MGP_CBAJ_G0007099.1 mouse_genomes_project 7 78919095 78934882 - Gm36633 lincRNA lincRNA MGP_CBAJ_T0087174.1 MGP_CBAJ_G0032902.1 mouse_genomes_project 7 157164972 157170489 + MGP_CBAJ_P0087174 Cracr2b protein_coding protein_coding MGP_CBAJ_T0087175.1 MGP_CBAJ_G0032902.1 mouse_genomes_project 7 157165773 157168900 + MGP_CBAJ_P0087175 Cracr2b protein_coding protein_coding MGP_CBAJ_T0087176.1 MGP_CBAJ_G0032902.1 mouse_genomes_project 7 157165838 157167333 + MGP_CBAJ_P0087176 Cracr2b protein_coding protein_coding MGP_CBAJ_T0087177.1 MGP_CBAJ_G0032902.1 mouse_genomes_project 7 157166981 157168600 + MGP_CBAJ_P0087177 Cracr2b protein_coding protein_coding MGP_CBAJ_T0087178.1 MGP_CBAJ_G0032902.1 mouse_genomes_project 7 157167281 157169948 + MGP_CBAJ_P0087178 Cracr2b protein_coding protein_coding MGP_CBAJ_T0087179.1 MGP_CBAJ_G0032902.1 mouse_genomes_project 7 157167914 157168703 + Cracr2b protein_coding retained_intron MGP_CBAJ_T0087180.1 MGP_CBAJ_G0032902.1 mouse_genomes_project 7 157168964 157169553 + Cracr2b protein_coding retained_intron MGP_CBAJ_T0087181.1 MGP_CBAJ_G0032902.1 mouse_genomes_project 7 157169098 157170234 + Cracr2b protein_coding retained_intron MGP_CBAJ_T0087182.1 MGP_CBAJ_G0032902.1 mouse_genomes_project 7 157169549 157170489 + MGP_CBAJ_P0087182 Cracr2b protein_coding protein_coding MGP_CBAJ_T0083676.1 MGP_CBAJ_G0031981.1 mouse_genomes_project 7 61208937 61248655 + MGP_CBAJ_P0083676 Tubgcp5 protein_coding protein_coding MGP_CBAJ_T0083677.1 MGP_CBAJ_G0031981.1 mouse_genomes_project 7 61208948 61244059 + Tubgcp5 protein_coding retained_intron MGP_CBAJ_T0083678.1 MGP_CBAJ_G0031981.1 mouse_genomes_project 7 61208951 61248424 + MGP_CBAJ_P0083678 Tubgcp5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083679.1 MGP_CBAJ_G0031981.1 mouse_genomes_project 7 61208975 61248424 + MGP_CBAJ_P0083679 Tubgcp5 protein_coding protein_coding MGP_CBAJ_T0083680.1 MGP_CBAJ_G0031981.1 mouse_genomes_project 7 61209009 61213697 + MGP_CBAJ_P0083680 Tubgcp5 protein_coding protein_coding MGP_CBAJ_T0083681.1 MGP_CBAJ_G0031981.1 mouse_genomes_project 7 61219409 61223734 + Tubgcp5 protein_coding retained_intron MGP_CBAJ_T0083682.1 MGP_CBAJ_G0031981.1 mouse_genomes_project 7 61221062 61232763 + Tubgcp5 protein_coding retained_intron MGP_CBAJ_T0083683.1 MGP_CBAJ_G0031981.1 mouse_genomes_project 7 61232310 61234035 + Tubgcp5 protein_coding retained_intron MGP_CBAJ_T0083684.1 MGP_CBAJ_G0031981.1 mouse_genomes_project 7 61236653 61247900 + Tubgcp5 protein_coding retained_intron MGP_CBAJ_T0083685.1 MGP_CBAJ_G0031981.1 mouse_genomes_project 7 61243240 61248215 + MGP_CBAJ_P0083685 Tubgcp5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0008829.1 MGP_CBAJ_G0007120.1 mouse_genomes_project 7 83177138 83180147 - lincRNA lincRNA MGP_CBAJ_T0008830.1 MGP_CBAJ_G0007120.1 mouse_genomes_project 7 83177862 83194215 - lincRNA lincRNA MGP_CBAJ_T0102148.1 MGP_CBAJ_G0040177.1 mouse_genomes_project 7 52182576 52182778 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081228.1 MGP_CBAJ_G0031329.1 mouse_genomes_project 7 11451629 11488279 + Lig1 protein_coding processed_transcript MGP_CBAJ_T0081229.1 MGP_CBAJ_G0031329.1 mouse_genomes_project 7 11451659 11488279 + MGP_CBAJ_P0081229 Lig1 protein_coding protein_coding MGP_CBAJ_T0081230.1 MGP_CBAJ_G0031329.1 mouse_genomes_project 7 11453171 11488279 + MGP_CBAJ_P0081230 Lig1 protein_coding protein_coding MGP_CBAJ_T0081231.1 MGP_CBAJ_G0031329.1 mouse_genomes_project 7 11453180 11468449 + MGP_CBAJ_P0081231 Lig1 protein_coding protein_coding MGP_CBAJ_T0081232.1 MGP_CBAJ_G0031329.1 mouse_genomes_project 7 11453200 11469428 + MGP_CBAJ_P0081232 Lig1 protein_coding protein_coding MGP_CBAJ_T0081233.1 MGP_CBAJ_G0031329.1 mouse_genomes_project 7 11453210 11488280 + Lig1 protein_coding processed_transcript MGP_CBAJ_T0081234.1 MGP_CBAJ_G0031329.1 mouse_genomes_project 7 11455587 11488287 + Lig1 protein_coding processed_transcript MGP_CBAJ_T0081235.1 MGP_CBAJ_G0031329.1 mouse_genomes_project 7 11455587 11488279 + MGP_CBAJ_P0081235 Lig1 protein_coding protein_coding MGP_CBAJ_T0081236.1 MGP_CBAJ_G0031329.1 mouse_genomes_project 7 11457072 11488287 + Lig1 protein_coding processed_transcript MGP_CBAJ_T0081237.1 MGP_CBAJ_G0031329.1 mouse_genomes_project 7 11457072 11468176 + MGP_CBAJ_P0081237 Lig1 protein_coding protein_coding MGP_CBAJ_T0081238.1 MGP_CBAJ_G0031329.1 mouse_genomes_project 7 11479737 11482923 + Lig1 protein_coding retained_intron MGP_CBAJ_T0081239.1 MGP_CBAJ_G0031329.1 mouse_genomes_project 7 11484097 11488219 + Lig1 protein_coding retained_intron MGP_CBAJ_T0015469.1 MGP_CBAJ_G0013581.1 mouse_genomes_project 7 3256288 3257237 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100736.1 MGP_CBAJ_G0038991.1 mouse_genomes_project 7 65082321 65082400 - Gm24966 snoRNA snoRNA MGP_CBAJ_T0087115.1 MGP_CBAJ_G0032896.1 mouse_genomes_project 7 157103060 157109016 - Pddc1 protein_coding retained_intron MGP_CBAJ_T0087116.1 MGP_CBAJ_G0032896.1 mouse_genomes_project 7 157103109 157104257 - Pddc1 protein_coding retained_intron MGP_CBAJ_T0087117.1 MGP_CBAJ_G0032896.1 mouse_genomes_project 7 157103109 157109062 - MGP_CBAJ_P0087117 Pddc1 protein_coding protein_coding MGP_CBAJ_T0087118.1 MGP_CBAJ_G0032896.1 mouse_genomes_project 7 157103111 157109004 - Pddc1 protein_coding retained_intron MGP_CBAJ_T0087119.1 MGP_CBAJ_G0032896.1 mouse_genomes_project 7 157105769 157108991 - Pddc1 protein_coding retained_intron MGP_CBAJ_T0087120.1 MGP_CBAJ_G0032896.1 mouse_genomes_project 7 157106476 157109002 - Pddc1 protein_coding retained_intron MGP_CBAJ_T0083594.1 MGP_CBAJ_G0031956.1 mouse_genomes_project 7 52730228 52731265 - MGP_CBAJ_P0083594 Mrgprb5 protein_coding protein_coding MGP_CBAJ_T0085788.1 MGP_CBAJ_G0032609.1 mouse_genomes_project 7 134328174 134330019 - MGP_CBAJ_P0085788 protein_coding protein_coding MGP_CBAJ_T0081927.1 MGP_CBAJ_G0031544.1 mouse_genomes_project 7 25865759 25871784 - MGP_CBAJ_P0081927 Tmem91 protein_coding protein_coding MGP_CBAJ_T0081928.1 MGP_CBAJ_G0031544.1 mouse_genomes_project 7 25865762 25870091 - MGP_CBAJ_P0081928 Tmem91 protein_coding protein_coding MGP_CBAJ_T0081929.1 MGP_CBAJ_G0031544.1 mouse_genomes_project 7 25865862 25871708 - MGP_CBAJ_P0081929 Tmem91 protein_coding protein_coding MGP_CBAJ_T0081930.1 MGP_CBAJ_G0031544.1 mouse_genomes_project 7 25865862 25871665 - MGP_CBAJ_P0081930 Tmem91 protein_coding protein_coding MGP_CBAJ_T0081931.1 MGP_CBAJ_G0031544.1 mouse_genomes_project 7 25866664 25871737 - Tmem91 protein_coding retained_intron MGP_CBAJ_T0081932.1 MGP_CBAJ_G0031544.1 mouse_genomes_project 7 25867814 25871736 - Tmem91 protein_coding retained_intron MGP_CBAJ_T0083063.1 MGP_CBAJ_G0031820.1 mouse_genomes_project 7 47545477 47552999 + MGP_CBAJ_P0083063 Klk6 protein_coding protein_coding MGP_CBAJ_T0083064.1 MGP_CBAJ_G0031820.1 mouse_genomes_project 7 47545536 47552755 + MGP_CBAJ_P0083064 Klk6 protein_coding protein_coding MGP_CBAJ_T0083065.1 MGP_CBAJ_G0031820.1 mouse_genomes_project 7 47545548 47549539 + MGP_CBAJ_P0083065 Klk6 protein_coding protein_coding MGP_CBAJ_T0083066.1 MGP_CBAJ_G0031820.1 mouse_genomes_project 7 47546349 47552755 + MGP_CBAJ_P0083066 Klk6 protein_coding protein_coding MGP_CBAJ_T0086108.1 MGP_CBAJ_G0032668.1 mouse_genomes_project 7 140753138 140756698 + MGP_CBAJ_P0086108 Ypel3 protein_coding protein_coding MGP_CBAJ_T0086109.1 MGP_CBAJ_G0032668.1 mouse_genomes_project 7 140753158 140756695 + MGP_CBAJ_P0086109 Ypel3 protein_coding protein_coding MGP_CBAJ_T0086110.1 MGP_CBAJ_G0032668.1 mouse_genomes_project 7 140753161 140754285 + MGP_CBAJ_P0086110 Ypel3 protein_coding protein_coding MGP_CBAJ_T0086111.1 MGP_CBAJ_G0032668.1 mouse_genomes_project 7 140753182 140754610 + Ypel3 protein_coding processed_transcript MGP_CBAJ_T0086112.1 MGP_CBAJ_G0032668.1 mouse_genomes_project 7 140753182 140756697 + Ypel3 protein_coding processed_transcript MGP_CBAJ_T0086113.1 MGP_CBAJ_G0032668.1 mouse_genomes_project 7 140753184 140756698 + MGP_CBAJ_P0086113 Ypel3 protein_coding protein_coding MGP_CBAJ_T0086114.1 MGP_CBAJ_G0032668.1 mouse_genomes_project 7 140753188 140756249 + MGP_CBAJ_P0086114 Ypel3 protein_coding protein_coding MGP_CBAJ_T0086115.1 MGP_CBAJ_G0032668.1 mouse_genomes_project 7 140753330 140754058 + MGP_CBAJ_P0086115 Ypel3 protein_coding protein_coding MGP_CBAJ_T0086116.1 MGP_CBAJ_G0032668.1 mouse_genomes_project 7 140753396 140756630 + MGP_CBAJ_P0086116 Ypel3 protein_coding protein_coding MGP_CBAJ_T0086117.1 MGP_CBAJ_G0032668.1 mouse_genomes_project 7 140753691 140756415 + Ypel3 protein_coding processed_transcript MGP_CBAJ_T0086118.1 MGP_CBAJ_G0032668.1 mouse_genomes_project 7 140753764 140754477 + Ypel3 protein_coding retained_intron MGP_CBAJ_T0008792.1 MGP_CBAJ_G0007091.1 mouse_genomes_project 7 74799533 74895428 + lincRNA lincRNA MGP_CBAJ_T0008793.1 MGP_CBAJ_G0007091.1 mouse_genomes_project 7 74806257 74885981 + lincRNA lincRNA MGP_CBAJ_T0008794.1 MGP_CBAJ_G0007091.1 mouse_genomes_project 7 74830439 74895426 + lincRNA lincRNA MGP_CBAJ_T0008795.1 MGP_CBAJ_G0007091.1 mouse_genomes_project 7 74863474 74886060 + lincRNA lincRNA MGP_CBAJ_T0083861.1 MGP_CBAJ_G0032018.1 mouse_genomes_project 7 72382193 72391935 + MGP_CBAJ_P0083861 Vimp protein_coding protein_coding MGP_CBAJ_T0083862.1 MGP_CBAJ_G0032018.1 mouse_genomes_project 7 72382221 72391928 + MGP_CBAJ_P0083862 Vimp protein_coding protein_coding MGP_CBAJ_T0083863.1 MGP_CBAJ_G0032018.1 mouse_genomes_project 7 72382249 72389974 + Vimp protein_coding retained_intron MGP_CBAJ_T0083864.1 MGP_CBAJ_G0032018.1 mouse_genomes_project 7 72382250 72391926 + MGP_CBAJ_P0083864 Vimp protein_coding protein_coding MGP_CBAJ_T0083865.1 MGP_CBAJ_G0032018.1 mouse_genomes_project 7 72382259 72391645 + MGP_CBAJ_P0083865 Vimp protein_coding nonsense_mediated_decay MGP_CBAJ_T0084721.1 MGP_CBAJ_G0032229.1 mouse_genomes_project 7 110549637 110589802 - MGP_CBAJ_P0084721 Pold3 protein_coding protein_coding MGP_CBAJ_T0084722.1 MGP_CBAJ_G0032229.1 mouse_genomes_project 7 110550917 110589692 - MGP_CBAJ_P0084722 Pold3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084723.1 MGP_CBAJ_G0032229.1 mouse_genomes_project 7 110551107 110560623 - Pold3 protein_coding retained_intron MGP_CBAJ_T0084724.1 MGP_CBAJ_G0032229.1 mouse_genomes_project 7 110551186 110557323 - Pold3 protein_coding retained_intron MGP_CBAJ_T0084725.1 MGP_CBAJ_G0032229.1 mouse_genomes_project 7 110563268 110567603 - Pold3 protein_coding retained_intron MGP_CBAJ_T0084726.1 MGP_CBAJ_G0032229.1 mouse_genomes_project 7 110565937 110567476 - Pold3 protein_coding retained_intron MGP_CBAJ_T0084727.1 MGP_CBAJ_G0032229.1 mouse_genomes_project 7 110566464 110589695 - Pold3 protein_coding processed_transcript MGP_CBAJ_T0084728.1 MGP_CBAJ_G0032229.1 mouse_genomes_project 7 110580381 110588021 - Pold3 protein_coding processed_transcript MGP_CBAJ_T0100753.1 MGP_CBAJ_G0039008.1 mouse_genomes_project 7 109826204 109826349 - Snord15b snoRNA snoRNA MGP_CBAJ_T0100740.1 MGP_CBAJ_G0038995.1 mouse_genomes_project 7 65447560 65447649 - Gm22373 snoRNA snoRNA MGP_CBAJ_T0005219.1 MGP_CBAJ_G0004422.1 mouse_genomes_project 7 142492850 142499107 - Gm44850 antisense antisense MGP_CBAJ_T0005106.1 MGP_CBAJ_G0004343.1 mouse_genomes_project 7 32357453 32358054 + Gm29439 antisense antisense MGP_CBAJ_T0002182.1 MGP_CBAJ_G0002097.1 mouse_genomes_project 7 43798354 43798847 - TEC TEC MGP_CBAJ_T0102101.1 MGP_CBAJ_G0040131.1 mouse_genomes_project 7 17557537 17565867 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0087474.1 MGP_CBAJ_G0032967.1 mouse_genomes_project 7 161434260 161443000 + MGP_CBAJ_P0087474 Mrgprf protein_coding protein_coding MGP_CBAJ_T0087475.1 MGP_CBAJ_G0032967.1 mouse_genomes_project 7 161434331 161442792 + MGP_CBAJ_P0087475 Mrgprf protein_coding protein_coding MGP_CBAJ_T0086755.1 MGP_CBAJ_G0032791.1 mouse_genomes_project 7 148507643 148543051 + MGP_CBAJ_P0086755 Edrf1 protein_coding protein_coding MGP_CBAJ_T0086756.1 MGP_CBAJ_G0032791.1 mouse_genomes_project 7 148507793 148542259 + MGP_CBAJ_P0086756 Edrf1 protein_coding protein_coding MGP_CBAJ_T0086757.1 MGP_CBAJ_G0032791.1 mouse_genomes_project 7 148507961 148509441 + Edrf1 protein_coding retained_intron MGP_CBAJ_T0086758.1 MGP_CBAJ_G0032791.1 mouse_genomes_project 7 148527196 148531973 + MGP_CBAJ_P0086758 Edrf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086759.1 MGP_CBAJ_G0032791.1 mouse_genomes_project 7 148536017 148542009 + MGP_CBAJ_P0086759 Edrf1 protein_coding protein_coding MGP_CBAJ_T0086760.1 MGP_CBAJ_G0032791.1 mouse_genomes_project 7 148537297 148541550 + Edrf1 protein_coding retained_intron MGP_CBAJ_T0084652.1 MGP_CBAJ_G0032208.1 mouse_genomes_project 7 108834123 108907987 - MGP_CBAJ_P0084652 Emsy protein_coding protein_coding MGP_CBAJ_T0084653.1 MGP_CBAJ_G0032208.1 mouse_genomes_project 7 108835907 108907754 - MGP_CBAJ_P0084653 Emsy protein_coding protein_coding MGP_CBAJ_T0084654.1 MGP_CBAJ_G0032208.1 mouse_genomes_project 7 108837571 108907759 - MGP_CBAJ_P0084654 Emsy protein_coding protein_coding MGP_CBAJ_T0084655.1 MGP_CBAJ_G0032208.1 mouse_genomes_project 7 108838230 108841183 - Emsy protein_coding retained_intron MGP_CBAJ_T0084656.1 MGP_CBAJ_G0032208.1 mouse_genomes_project 7 108840446 108842002 - Emsy protein_coding processed_transcript MGP_CBAJ_T0084657.1 MGP_CBAJ_G0032208.1 mouse_genomes_project 7 108842110 108861874 - MGP_CBAJ_P0084657 Emsy protein_coding protein_coding MGP_CBAJ_T0084658.1 MGP_CBAJ_G0032208.1 mouse_genomes_project 7 108843479 108849336 - Emsy protein_coding retained_intron MGP_CBAJ_T0084659.1 MGP_CBAJ_G0032208.1 mouse_genomes_project 7 108844031 108864407 - MGP_CBAJ_P0084659 Emsy protein_coding protein_coding MGP_CBAJ_T0084660.1 MGP_CBAJ_G0032208.1 mouse_genomes_project 7 108847472 108849796 - Emsy protein_coding retained_intron MGP_CBAJ_T0084661.1 MGP_CBAJ_G0032208.1 mouse_genomes_project 7 108849604 108907803 - MGP_CBAJ_P0084661 Emsy protein_coding protein_coding MGP_CBAJ_T0084662.1 MGP_CBAJ_G0032208.1 mouse_genomes_project 7 108878666 108907772 - MGP_CBAJ_P0084662 Emsy protein_coding protein_coding MGP_CBAJ_T0084663.1 MGP_CBAJ_G0032208.1 mouse_genomes_project 7 108885657 108893565 - MGP_CBAJ_P0084663 Emsy protein_coding protein_coding MGP_CBAJ_T0084664.1 MGP_CBAJ_G0032208.1 mouse_genomes_project 7 108891425 108907991 - Emsy protein_coding retained_intron MGP_CBAJ_T0086223.1 MGP_CBAJ_G0032686.1 mouse_genomes_project 7 141021468 141023770 - MGP_CBAJ_P0086223 Pagr1a protein_coding protein_coding MGP_CBAJ_T0086224.1 MGP_CBAJ_G0032686.1 mouse_genomes_project 7 141021482 141026745 - Pagr1a protein_coding retained_intron MGP_CBAJ_T0086228.1 MGP_CBAJ_G0032686.1 mouse_genomes_project 7 141022648 141027515 - Pagr1a protein_coding processed_transcript MGP_CBAJ_T0086229.1 MGP_CBAJ_G0032686.1 mouse_genomes_project 7 141022651 141027457 - MGP_CBAJ_P0086229 Pagr1a protein_coding protein_coding MGP_CBAJ_T0086230.1 MGP_CBAJ_G0032686.1 mouse_genomes_project 7 141023188 141027507 - Pagr1a protein_coding processed_transcript MGP_CBAJ_T0100722.1 MGP_CBAJ_G0038977.1 mouse_genomes_project 7 37423008 37423134 + Gm24505 snoRNA snoRNA MGP_CBAJ_T0005233.1 MGP_CBAJ_G0004432.1 mouse_genomes_project 7 158893388 158912443 - Tspan32os antisense antisense MGP_CBAJ_T0005234.1 MGP_CBAJ_G0004432.1 mouse_genomes_project 7 158893388 158895198 - Tspan32os antisense antisense MGP_CBAJ_T0080869.1 MGP_CBAJ_G0031199.1 mouse_genomes_project 7 1287048 1292199 + MGP_CBAJ_P0080869 Leng8 protein_coding protein_coding MGP_CBAJ_T0080870.1 MGP_CBAJ_G0031199.1 mouse_genomes_project 7 1287058 1298193 + MGP_CBAJ_P0080870 Leng8 protein_coding protein_coding MGP_CBAJ_T0080871.1 MGP_CBAJ_G0031199.1 mouse_genomes_project 7 1287058 1290015 + MGP_CBAJ_P0080871 Leng8 protein_coding protein_coding MGP_CBAJ_T0080872.1 MGP_CBAJ_G0031199.1 mouse_genomes_project 7 1287069 1290468 + MGP_CBAJ_P0080872 Leng8 protein_coding protein_coding MGP_CBAJ_T0080873.1 MGP_CBAJ_G0031199.1 mouse_genomes_project 7 1287075 1298188 + MGP_CBAJ_P0080873 Leng8 protein_coding protein_coding MGP_CBAJ_T0080874.1 MGP_CBAJ_G0031199.1 mouse_genomes_project 7 1287080 1292124 + MGP_CBAJ_P0080874 Leng8 protein_coding protein_coding MGP_CBAJ_T0080875.1 MGP_CBAJ_G0031199.1 mouse_genomes_project 7 1287093 1298189 + Leng8 protein_coding retained_intron MGP_CBAJ_T0080876.1 MGP_CBAJ_G0031199.1 mouse_genomes_project 7 1287577 1291109 + MGP_CBAJ_P0080876 Leng8 protein_coding protein_coding MGP_CBAJ_T0080877.1 MGP_CBAJ_G0031199.1 mouse_genomes_project 7 1292174 1292945 + Leng8 protein_coding retained_intron MGP_CBAJ_T0080878.1 MGP_CBAJ_G0031199.1 mouse_genomes_project 7 1294735 1295658 + Leng8 protein_coding retained_intron MGP_CBAJ_T0015501.1 MGP_CBAJ_G0013613.1 mouse_genomes_project 7 16988645 16989137 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0085272.1 MGP_CBAJ_G0032450.1 mouse_genomes_project 7 118570607 118571558 - MGP_CBAJ_P0085272 protein_coding protein_coding MGP_CBAJ_T0087332.1 MGP_CBAJ_G0032933.1 mouse_genomes_project 7 158633447 158634464 - MGP_CBAJ_P0087332 Rpl13-ps3 protein_coding protein_coding MGP_CBAJ_T0085206.1 MGP_CBAJ_G0032428.1 mouse_genomes_project 7 117026874 117030456 + MGP_CBAJ_P0085206 protein_coding protein_coding MGP_CBAJ_T0085207.1 MGP_CBAJ_G0032428.1 mouse_genomes_project 7 117027266 117028662 + MGP_CBAJ_P0085207 protein_coding protein_coding MGP_CBAJ_T0085208.1 MGP_CBAJ_G0032428.1 mouse_genomes_project 7 117027370 117040658 + MGP_CBAJ_P0085208 protein_coding protein_coding MGP_CBAJ_T0085210.1 MGP_CBAJ_G0032428.1 mouse_genomes_project 7 117027382 117028604 + protein_coding retained_intron MGP_CBAJ_T0085211.1 MGP_CBAJ_G0032428.1 mouse_genomes_project 7 117027382 117043894 + MGP_CBAJ_P0085211 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085212.1 MGP_CBAJ_G0032428.1 mouse_genomes_project 7 117027385 117028658 + MGP_CBAJ_P0085212 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085213.1 MGP_CBAJ_G0032428.1 mouse_genomes_project 7 117027388 117047963 + MGP_CBAJ_P0085213 protein_coding protein_coding MGP_CBAJ_T0085214.1 MGP_CBAJ_G0032428.1 mouse_genomes_project 7 117027389 117030451 + MGP_CBAJ_P0085214 protein_coding protein_coding MGP_CBAJ_T0085216.1 MGP_CBAJ_G0032428.1 mouse_genomes_project 7 117027407 117028568 + protein_coding processed_transcript MGP_CBAJ_T0085217.1 MGP_CBAJ_G0032428.1 mouse_genomes_project 7 117027408 117028644 + MGP_CBAJ_P0085217 protein_coding protein_coding MGP_CBAJ_T0085218.1 MGP_CBAJ_G0032428.1 mouse_genomes_project 7 117027489 117028103 + protein_coding retained_intron MGP_CBAJ_T0083335.1 MGP_CBAJ_G0031888.1 mouse_genomes_project 7 49481035 49500101 - MGP_CBAJ_P0083335 Snrnp70 protein_coding protein_coding MGP_CBAJ_T0083336.1 MGP_CBAJ_G0031888.1 mouse_genomes_project 7 49481041 49488468 - MGP_CBAJ_P0083336 Snrnp70 protein_coding protein_coding MGP_CBAJ_T0083337.1 MGP_CBAJ_G0031888.1 mouse_genomes_project 7 49481044 49500017 - Snrnp70 protein_coding retained_intron MGP_CBAJ_T0083338.1 MGP_CBAJ_G0031888.1 mouse_genomes_project 7 49481045 49500051 - Snrnp70 protein_coding retained_intron MGP_CBAJ_T0083339.1 MGP_CBAJ_G0031888.1 mouse_genomes_project 7 49481728 49496682 - MGP_CBAJ_P0083339 Snrnp70 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083340.1 MGP_CBAJ_G0031888.1 mouse_genomes_project 7 49485935 49488857 - Snrnp70 protein_coding retained_intron MGP_CBAJ_T0083341.1 MGP_CBAJ_G0031888.1 mouse_genomes_project 7 49488122 49499160 - Snrnp70 protein_coding retained_intron MGP_CBAJ_T0083342.1 MGP_CBAJ_G0031888.1 mouse_genomes_project 7 49488290 49492330 - Snrnp70 protein_coding retained_intron MGP_CBAJ_T0083343.1 MGP_CBAJ_G0031888.1 mouse_genomes_project 7 49488340 49499537 - MGP_CBAJ_P0083343 Snrnp70 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083344.1 MGP_CBAJ_G0031888.1 mouse_genomes_project 7 49488355 49499559 - MGP_CBAJ_P0083344 Snrnp70 protein_coding protein_coding MGP_CBAJ_T0083345.1 MGP_CBAJ_G0031888.1 mouse_genomes_project 7 49491508 49499080 - Snrnp70 protein_coding retained_intron MGP_CBAJ_T0083346.1 MGP_CBAJ_G0031888.1 mouse_genomes_project 7 49491949 49500068 - MGP_CBAJ_P0083346 Snrnp70 protein_coding protein_coding MGP_CBAJ_T0083347.1 MGP_CBAJ_G0031888.1 mouse_genomes_project 7 49491993 49497139 - Snrnp70 protein_coding processed_transcript MGP_CBAJ_T0083348.1 MGP_CBAJ_G0031888.1 mouse_genomes_project 7 49495547 49497245 - Snrnp70 protein_coding retained_intron MGP_CBAJ_T0083349.1 MGP_CBAJ_G0031888.1 mouse_genomes_project 7 49496184 49499916 - Snrnp70 protein_coding retained_intron MGP_CBAJ_T0015667.1 MGP_CBAJ_G0013779.1 mouse_genomes_project 7 121340282 121341680 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008739.1 MGP_CBAJ_G0007052.1 mouse_genomes_project 7 39603590 39612187 - Gm28078 lincRNA lincRNA MGP_CBAJ_T0083975.1 MGP_CBAJ_G0032040.1 mouse_genomes_project 7 80986600 81024022 + MGP_CBAJ_P0083975 Fam174b protein_coding protein_coding MGP_CBAJ_T0083976.1 MGP_CBAJ_G0032040.1 mouse_genomes_project 7 81013650 81022262 + MGP_CBAJ_P0083976 Fam174b protein_coding protein_coding MGP_CBAJ_T0083977.1 MGP_CBAJ_G0032040.1 mouse_genomes_project 7 81013714 81023121 + Fam174b protein_coding retained_intron MGP_CBAJ_T0099484.1 MGP_CBAJ_G0037739.1 mouse_genomes_project 7 40815812 40815870 - Gm22203 snRNA snRNA MGP_CBAJ_T0010763.1 MGP_CBAJ_G0008901.1 mouse_genomes_project 7 67640365 67640435 - Gm23873 miRNA miRNA MGP_CBAJ_T0085184.1 MGP_CBAJ_G0032425.1 mouse_genomes_project 7 116967644 116975875 - MGP_CBAJ_P0085184 Hpx protein_coding protein_coding MGP_CBAJ_T0085185.1 MGP_CBAJ_G0032425.1 mouse_genomes_project 7 116967713 116976282 - MGP_CBAJ_P0085185 Hpx protein_coding unknown_likely_coding MGP_CBAJ_T0100759.1 MGP_CBAJ_G0039014.1 mouse_genomes_project 7 121493094 121493226 + Snora3 snoRNA snoRNA MGP_CBAJ_T0084567.1 MGP_CBAJ_G0032191.1 mouse_genomes_project 7 107514581 107519321 - MGP_CBAJ_P0084567 Thrsp protein_coding protein_coding MGP_CBAJ_T0084568.1 MGP_CBAJ_G0032191.1 mouse_genomes_project 7 107517735 107519110 - Thrsp protein_coding retained_intron MGP_CBAJ_T0085818.1 MGP_CBAJ_G0032620.1 mouse_genomes_project 7 135511546 135526566 + MGP_CBAJ_P0085818 Ubfd1 protein_coding protein_coding MGP_CBAJ_T0085819.1 MGP_CBAJ_G0032620.1 mouse_genomes_project 7 135511579 135522004 + Ubfd1 protein_coding retained_intron MGP_CBAJ_T0085820.1 MGP_CBAJ_G0032620.1 mouse_genomes_project 7 135511811 135515778 + Ubfd1 protein_coding retained_intron MGP_CBAJ_T0085821.1 MGP_CBAJ_G0032620.1 mouse_genomes_project 7 135511818 135513351 + Ubfd1 protein_coding processed_transcript MGP_CBAJ_T0085822.1 MGP_CBAJ_G0032620.1 mouse_genomes_project 7 135513270 135522983 + MGP_CBAJ_P0085822 Ubfd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0102193.1 MGP_CBAJ_G0040222.1 mouse_genomes_project 7 95376250 95376945 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081292.1 MGP_CBAJ_G0031358.1 mouse_genomes_project 7 14952171 14975009 + MGP_CBAJ_P0081292 Napa protein_coding protein_coding MGP_CBAJ_T0081293.1 MGP_CBAJ_G0031358.1 mouse_genomes_project 7 14952320 14970570 + Napa protein_coding processed_transcript MGP_CBAJ_T0081294.1 MGP_CBAJ_G0031358.1 mouse_genomes_project 7 14952344 14970169 + Napa protein_coding retained_intron MGP_CBAJ_T0081295.1 MGP_CBAJ_G0031358.1 mouse_genomes_project 7 14952350 14966342 + Napa protein_coding processed_transcript MGP_CBAJ_T0081296.1 MGP_CBAJ_G0031358.1 mouse_genomes_project 7 14966083 14971260 + Napa protein_coding retained_intron MGP_CBAJ_T0081297.1 MGP_CBAJ_G0031358.1 mouse_genomes_project 7 14970678 14973593 + Napa protein_coding retained_intron MGP_CBAJ_T0081298.1 MGP_CBAJ_G0031358.1 mouse_genomes_project 7 14972137 14973773 + Napa protein_coding processed_transcript MGP_CBAJ_T0081039.1 MGP_CBAJ_G0031242.1 mouse_genomes_project 7 2303221 2307559 + MGP_CBAJ_P0081039 protein_coding protein_coding MGP_CBAJ_T0082487.1 MGP_CBAJ_G0031684.1 mouse_genomes_project 7 31717573 31719306 + MGP_CBAJ_P0082487 E130208F15Rik protein_coding protein_coding MGP_CBAJ_T0102212.1 MGP_CBAJ_G0040241.1 mouse_genomes_project 7 115402088 115403084 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0083446.1 MGP_CBAJ_G0031916.1 mouse_genomes_project 7 49894832 49895539 - MGP_CBAJ_P0083446 Spaca4 protein_coding protein_coding MGP_CBAJ_T0081122.1 MGP_CBAJ_G0031285.1 mouse_genomes_project 7 8320062 8321022 - MGP_CBAJ_P0081122 Vmn1r68 protein_coding protein_coding MGP_CBAJ_T0086662.1 MGP_CBAJ_G0032766.1 mouse_genomes_project 7 145520422 145567111 + Htra1 protein_coding retained_intron MGP_CBAJ_T0086663.1 MGP_CBAJ_G0032766.1 mouse_genomes_project 7 145520514 145572837 + MGP_CBAJ_P0086663 Htra1 protein_coding protein_coding MGP_CBAJ_T0086664.1 MGP_CBAJ_G0032766.1 mouse_genomes_project 7 145527740 145572837 + Htra1 protein_coding processed_transcript MGP_CBAJ_T0086665.1 MGP_CBAJ_G0032766.1 mouse_genomes_project 7 145568846 145569620 + Htra1 protein_coding retained_intron MGP_CBAJ_T0086666.1 MGP_CBAJ_G0032766.1 mouse_genomes_project 7 145569906 145572573 + Htra1 protein_coding processed_transcript MGP_CBAJ_T0085134.1 MGP_CBAJ_G0032401.1 mouse_genomes_project 7 116132480 116133434 + MGP_CBAJ_P0085134 Olfr669 protein_coding protein_coding MGP_CBAJ_T0100772.1 MGP_CBAJ_G0039027.1 mouse_genomes_project 7 138200180 138200323 + Gm23168 snoRNA snoRNA MGP_CBAJ_T0086389.1 MGP_CBAJ_G0032719.1 mouse_genomes_project 7 141815674 141873007 - MGP_CBAJ_P0086389 Bcl7c protein_coding nonsense_mediated_decay MGP_CBAJ_T0086390.1 MGP_CBAJ_G0032719.1 mouse_genomes_project 7 141821010 141872861 - MGP_CBAJ_P0086390 Bcl7c protein_coding protein_coding MGP_CBAJ_T0086391.1 MGP_CBAJ_G0032719.1 mouse_genomes_project 7 141821166 141872684 - MGP_CBAJ_P0086391 Bcl7c protein_coding nonsense_mediated_decay MGP_CBAJ_T0086392.1 MGP_CBAJ_G0032719.1 mouse_genomes_project 7 141868066 141871526 - MGP_CBAJ_P0086392 Bcl7c protein_coding nonsense_mediated_decay MGP_CBAJ_T0086393.1 MGP_CBAJ_G0032719.1 mouse_genomes_project 7 141868128 141872749 - MGP_CBAJ_P0086393 Bcl7c protein_coding protein_coding MGP_CBAJ_T0086394.1 MGP_CBAJ_G0032719.1 mouse_genomes_project 7 141868872 141872297 - Bcl7c protein_coding processed_transcript MGP_CBAJ_T0083352.1 MGP_CBAJ_G0031891.1 mouse_genomes_project 7 49528442 49529484 + MGP_CBAJ_P0083352 Lhb protein_coding protein_coding MGP_CBAJ_T0082816.1 MGP_CBAJ_G0031753.1 mouse_genomes_project 7 37234393 37244545 - MGP_CBAJ_P0082816 Cebpg protein_coding protein_coding MGP_CBAJ_T0082817.1 MGP_CBAJ_G0031753.1 mouse_genomes_project 7 37237867 37239477 - Cebpg protein_coding retained_intron MGP_CBAJ_T0082818.1 MGP_CBAJ_G0031753.1 mouse_genomes_project 7 37238286 37243912 - MGP_CBAJ_P0082818 Cebpg protein_coding protein_coding MGP_CBAJ_T0082819.1 MGP_CBAJ_G0031753.1 mouse_genomes_project 7 37238836 37243955 - Cebpg protein_coding processed_transcript MGP_CBAJ_T0015524.1 MGP_CBAJ_G0013636.1 mouse_genomes_project 7 27620633 27639049 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0083988.1 MGP_CBAJ_G0032043.1 mouse_genomes_project 7 82468090 82559393 - MGP_CBAJ_P0083988 protein_coding unknown_likely_coding MGP_CBAJ_T0083989.1 MGP_CBAJ_G0032043.1 mouse_genomes_project 7 82473147 82501126 - MGP_CBAJ_P0083989 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083990.1 MGP_CBAJ_G0032043.1 mouse_genomes_project 7 82513139 82517802 - protein_coding processed_transcript MGP_CBAJ_T0083991.1 MGP_CBAJ_G0032043.1 mouse_genomes_project 7 82513139 82517791 - protein_coding processed_transcript MGP_CBAJ_T0083992.1 MGP_CBAJ_G0032043.1 mouse_genomes_project 7 82554956 82669705 - protein_coding retained_intron MGP_CBAJ_T0081351.1 MGP_CBAJ_G0031373.1 mouse_genomes_project 7 15615646 15617971 - MGP_CBAJ_P0081351 Ceacam15 protein_coding protein_coding MGP_CBAJ_T0005182.1 MGP_CBAJ_G0004396.1 mouse_genomes_project 7 110049593 110055156 + Gm15635 antisense antisense MGP_CBAJ_T0005183.1 MGP_CBAJ_G0004396.1 mouse_genomes_project 7 110053241 110055067 + Gm15635 antisense antisense MGP_CBAJ_T0005184.1 MGP_CBAJ_G0004396.1 mouse_genomes_project 7 110053293 110055529 + Gm15635 antisense antisense MGP_CBAJ_T0015587.1 MGP_CBAJ_G0013699.1 mouse_genomes_project 7 60601602 60603408 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018072.1 MGP_CBAJ_G0015397.1 mouse_genomes_project 7 24868452 24896240 + Gm5893 processed_transcript lincRNA MGP_CBAJ_T0018073.1 MGP_CBAJ_G0015397.1 mouse_genomes_project 7 24868452 24896223 + Gm5893 processed_transcript processed_transcript MGP_CBAJ_T0018074.1 MGP_CBAJ_G0015397.1 mouse_genomes_project 7 24871766 24875530 + Gm5893 processed_transcript retained_intron MGP_CBAJ_T0018075.1 MGP_CBAJ_G0015397.1 mouse_genomes_project 7 24877944 24896238 + Gm5893 processed_transcript retained_intron MGP_CBAJ_T0100734.1 MGP_CBAJ_G0038989.1 mouse_genomes_project 7 63799668 63799800 - Gm26288 snoRNA snoRNA MGP_CBAJ_T0099482.1 MGP_CBAJ_G0037737.1 mouse_genomes_project 7 31752486 31752679 - Gm25259 snRNA snRNA MGP_CBAJ_T0002222.1 MGP_CBAJ_G0002136.1 mouse_genomes_project 7 82862544 82863940 + TEC TEC MGP_CBAJ_T0084678.1 MGP_CBAJ_G0032214.1 mouse_genomes_project 7 109598482 109676892 + MGP_CBAJ_P0084678 Map6 protein_coding protein_coding MGP_CBAJ_T0084679.1 MGP_CBAJ_G0032214.1 mouse_genomes_project 7 109598482 109676892 + MGP_CBAJ_P0084679 Map6 protein_coding protein_coding MGP_CBAJ_T0084680.1 MGP_CBAJ_G0032214.1 mouse_genomes_project 7 109598524 109660308 + Map6 protein_coding retained_intron MGP_CBAJ_T0084681.1 MGP_CBAJ_G0032214.1 mouse_genomes_project 7 109599381 109676893 + MGP_CBAJ_P0084681 Map6 protein_coding protein_coding MGP_CBAJ_T0084682.1 MGP_CBAJ_G0032214.1 mouse_genomes_project 7 109661151 109662407 + Map6 protein_coding processed_transcript MGP_CBAJ_T0084331.1 MGP_CBAJ_G0032107.1 mouse_genomes_project 7 90139639 90139901 - MGP_CBAJ_P0084331 Gm10160 protein_coding protein_coding MGP_CBAJ_T0081258.1 MGP_CBAJ_G0031340.1 mouse_genomes_project 7 12736416 12738537 - MGP_CBAJ_P0081258 Obox8 protein_coding protein_coding MGP_CBAJ_T0005083.1 MGP_CBAJ_G0004325.1 mouse_genomes_project 7 23993811 23997911 - Gm44793 antisense antisense MGP_CBAJ_T0081677.1 MGP_CBAJ_G0031477.1 mouse_genomes_project 7 23568809 23569525 + MGP_CBAJ_P0081677 Vmn1r173 protein_coding protein_coding MGP_CBAJ_T0084569.1 MGP_CBAJ_G0032192.1 mouse_genomes_project 7 107562782 107570816 + MGP_CBAJ_P0084569 protein_coding protein_coding MGP_CBAJ_T0087333.1 MGP_CBAJ_G0032934.1 mouse_genomes_project 7 158713437 158733847 + MGP_CBAJ_P0087333 protein_coding protein_coding MGP_CBAJ_T0087334.1 MGP_CBAJ_G0032934.1 mouse_genomes_project 7 158731080 158733046 + protein_coding processed_transcript MGP_CBAJ_T0085025.1 MGP_CBAJ_G0032320.1 mouse_genomes_project 7 114359082 114360027 - MGP_CBAJ_P0085025 Olfr600 protein_coding protein_coding MGP_CBAJ_T0098455.1 MGP_CBAJ_G0036717.1 mouse_genomes_project 7 128952900 128954265 - Gm44867 sense_intronic sense_intronic MGP_CBAJ_T0098456.1 MGP_CBAJ_G0036717.1 mouse_genomes_project 7 128952900 128954123 - Gm44867 sense_intronic sense_intronic MGP_CBAJ_T0005237.1 MGP_CBAJ_G0004435.1 mouse_genomes_project 7 159239621 159247481 - antisense antisense MGP_CBAJ_T0002183.1 MGP_CBAJ_G0002098.1 mouse_genomes_project 7 46710849 46710974 + TEC TEC MGP_CBAJ_T0084525.1 MGP_CBAJ_G0032180.1 mouse_genomes_project 7 102207518 102237238 - MGP_CBAJ_P0084525 Pcf11 protein_coding protein_coding MGP_CBAJ_T0084526.1 MGP_CBAJ_G0032180.1 mouse_genomes_project 7 102208065 102230848 - MGP_CBAJ_P0084526 Pcf11 protein_coding protein_coding MGP_CBAJ_T0084527.1 MGP_CBAJ_G0032180.1 mouse_genomes_project 7 102210622 102212005 - Pcf11 protein_coding retained_intron MGP_CBAJ_T0086719.1 MGP_CBAJ_G0032786.1 mouse_genomes_project 7 147602439 147631848 - MGP_CBAJ_P0086719 Mettl10 protein_coding protein_coding MGP_CBAJ_T0086720.1 MGP_CBAJ_G0032786.1 mouse_genomes_project 7 147602591 147631791 - MGP_CBAJ_P0086720 Mettl10 protein_coding protein_coding MGP_CBAJ_T0086721.1 MGP_CBAJ_G0032786.1 mouse_genomes_project 7 147602763 147631554 - Mettl10 protein_coding processed_transcript MGP_CBAJ_T0086722.1 MGP_CBAJ_G0032786.1 mouse_genomes_project 7 147606342 147631790 - MGP_CBAJ_P0086722 Mettl10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086723.1 MGP_CBAJ_G0032786.1 mouse_genomes_project 7 147606350 147631760 - MGP_CBAJ_P0086723 Mettl10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086724.1 MGP_CBAJ_G0032786.1 mouse_genomes_project 7 147629280 147631814 - Mettl10 protein_coding processed_transcript MGP_CBAJ_T0002277.1 MGP_CBAJ_G0002191.1 mouse_genomes_project 7 142214180 142217510 + TEC TEC MGP_CBAJ_T0085028.1 MGP_CBAJ_G0032323.1 mouse_genomes_project 7 114477143 114478103 + MGP_CBAJ_P0085028 Olfr606 protein_coding protein_coding MGP_CBAJ_T0082904.1 MGP_CBAJ_G0031769.1 mouse_genomes_project 7 39134306 39216970 + MGP_CBAJ_P0082904 Tshz3 protein_coding protein_coding MGP_CBAJ_T0082905.1 MGP_CBAJ_G0031769.1 mouse_genomes_project 7 39134398 39138289 + Tshz3 protein_coding processed_transcript MGP_CBAJ_T0008891.1 MGP_CBAJ_G0007156.1 mouse_genomes_project 7 127529596 127565101 + A730082K24Rik lincRNA lincRNA MGP_CBAJ_T0008892.1 MGP_CBAJ_G0007156.1 mouse_genomes_project 7 127529634 127538991 + A730082K24Rik lincRNA lincRNA MGP_CBAJ_T0008893.1 MGP_CBAJ_G0007156.1 mouse_genomes_project 7 127532188 127556101 + A730082K24Rik lincRNA lincRNA MGP_CBAJ_T0008894.1 MGP_CBAJ_G0007156.1 mouse_genomes_project 7 127532203 127556067 + A730082K24Rik lincRNA lincRNA MGP_CBAJ_T0008895.1 MGP_CBAJ_G0007156.1 mouse_genomes_project 7 127532221 127564006 + A730082K24Rik lincRNA lincRNA MGP_CBAJ_T0085020.1 MGP_CBAJ_G0032315.1 mouse_genomes_project 7 114203823 114204759 + MGP_CBAJ_P0085020 Olfr594 protein_coding protein_coding MGP_CBAJ_T0015607.1 MGP_CBAJ_G0013719.1 mouse_genomes_project 7 77293026 77294036 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0081328.1 MGP_CBAJ_G0031365.1 mouse_genomes_project 7 15170293 15172000 - MGP_CBAJ_P0081328 Inafm1 protein_coding protein_coding MGP_CBAJ_T0084545.1 MGP_CBAJ_G0032185.1 mouse_genomes_project 7 107004128 107143715 + MGP_CBAJ_P0084545 Nars2 protein_coding protein_coding MGP_CBAJ_T0084546.1 MGP_CBAJ_G0032185.1 mouse_genomes_project 7 107004144 107066663 + Nars2 protein_coding processed_transcript MGP_CBAJ_T0084547.1 MGP_CBAJ_G0032185.1 mouse_genomes_project 7 107004185 107114092 + MGP_CBAJ_P0084547 Nars2 protein_coding protein_coding MGP_CBAJ_T0084548.1 MGP_CBAJ_G0032185.1 mouse_genomes_project 7 107095679 107141898 + MGP_CBAJ_P0084548 Nars2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084549.1 MGP_CBAJ_G0032185.1 mouse_genomes_project 7 107113453 107141928 + MGP_CBAJ_P0084549 Nars2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086790.1 MGP_CBAJ_G0032797.1 mouse_genomes_project 7 148763379 149143454 - MGP_CBAJ_P0086790 Adam12 protein_coding protein_coding MGP_CBAJ_T0086791.1 MGP_CBAJ_G0032797.1 mouse_genomes_project 7 148772401 148871487 - MGP_CBAJ_P0086791 Adam12 protein_coding protein_coding MGP_CBAJ_T0086792.1 MGP_CBAJ_G0032797.1 mouse_genomes_project 7 148885720 149152726 - MGP_CBAJ_P0086792 Adam12 protein_coding protein_coding MGP_CBAJ_T0086793.1 MGP_CBAJ_G0032797.1 mouse_genomes_project 7 148891657 149152867 - MGP_CBAJ_P0086793 Adam12 protein_coding protein_coding MGP_CBAJ_T0086794.1 MGP_CBAJ_G0032797.1 mouse_genomes_project 7 149090329 149091338 - Adam12 protein_coding retained_intron MGP_CBAJ_T0086795.1 MGP_CBAJ_G0032797.1 mouse_genomes_project 7 149110010 149143729 - Adam12 protein_coding processed_transcript MGP_CBAJ_T0102095.1 MGP_CBAJ_G0040125.1 mouse_genomes_project 7 14437439 14437728 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0086356.1 MGP_CBAJ_G0032714.1 mouse_genomes_project 7 141691423 141695304 + MGP_CBAJ_P0086356 Tmem265 protein_coding protein_coding MGP_CBAJ_T0086357.1 MGP_CBAJ_G0032714.1 mouse_genomes_project 7 141691612 141696986 + MGP_CBAJ_P0086357 Tmem265 protein_coding protein_coding MGP_CBAJ_T0011560.1 MGP_CBAJ_G0009698.1 mouse_genomes_project 7 82293627 82293978 - Gm22326 misc_RNA misc_RNA MGP_CBAJ_T0082433.1 MGP_CBAJ_G0031676.1 mouse_genomes_project 7 31609844 31613836 + MGP_CBAJ_P0082433 Polr2i protein_coding protein_coding MGP_CBAJ_T0082434.1 MGP_CBAJ_G0031676.1 mouse_genomes_project 7 31610228 31613831 + MGP_CBAJ_P0082434 Polr2i protein_coding protein_coding MGP_CBAJ_T0082435.1 MGP_CBAJ_G0031676.1 mouse_genomes_project 7 31610228 31613832 + MGP_CBAJ_P0082435 Polr2i protein_coding protein_coding MGP_CBAJ_T0082436.1 MGP_CBAJ_G0031676.1 mouse_genomes_project 7 31610238 31613829 + Polr2i protein_coding retained_intron MGP_CBAJ_T0082437.1 MGP_CBAJ_G0031676.1 mouse_genomes_project 7 31610242 31613841 + MGP_CBAJ_P0082437 Polr2i protein_coding protein_coding MGP_CBAJ_T0082438.1 MGP_CBAJ_G0031676.1 mouse_genomes_project 7 31610246 31613771 + Polr2i protein_coding retained_intron MGP_CBAJ_T0082439.1 MGP_CBAJ_G0031676.1 mouse_genomes_project 7 31610499 31613833 + Polr2i protein_coding processed_transcript MGP_CBAJ_T0082440.1 MGP_CBAJ_G0031676.1 mouse_genomes_project 7 31610828 31613828 + Polr2i protein_coding retained_intron MGP_CBAJ_T0010761.1 MGP_CBAJ_G0008899.1 mouse_genomes_project 7 67605020 67605086 - Mir344e miRNA miRNA MGP_CBAJ_T0100758.1 MGP_CBAJ_G0039013.1 mouse_genomes_project 7 118005888 118006024 + Gm22372 snoRNA snoRNA MGP_CBAJ_T0083824.1 MGP_CBAJ_G0032012.1 mouse_genomes_project 7 71505679 71590286 - MGP_CBAJ_P0083824 Tjp1 protein_coding protein_coding MGP_CBAJ_T0083825.1 MGP_CBAJ_G0032012.1 mouse_genomes_project 7 71506222 71590062 - MGP_CBAJ_P0083825 Tjp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083826.1 MGP_CBAJ_G0032012.1 mouse_genomes_project 7 71506222 71590062 - MGP_CBAJ_P0083826 Tjp1 protein_coding protein_coding MGP_CBAJ_T0083827.1 MGP_CBAJ_G0032012.1 mouse_genomes_project 7 71507018 71511818 - Tjp1 protein_coding processed_transcript MGP_CBAJ_T0083828.1 MGP_CBAJ_G0032012.1 mouse_genomes_project 7 71554426 71557001 - Tjp1 protein_coding retained_intron MGP_CBAJ_T0083829.1 MGP_CBAJ_G0032012.1 mouse_genomes_project 7 71556820 71770491 - MGP_CBAJ_P0083829 Tjp1 protein_coding protein_coding MGP_CBAJ_T0083830.1 MGP_CBAJ_G0032012.1 mouse_genomes_project 7 71755899 71770576 - Tjp1 protein_coding retained_intron MGP_CBAJ_T0102098.1 MGP_CBAJ_G0040128.1 mouse_genomes_project 7 16244832 16245823 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010700.1 MGP_CBAJ_G0008838.1 mouse_genomes_project 7 175966 176048 + Mir291a miRNA miRNA MGP_CBAJ_T0082854.1 MGP_CBAJ_G0031761.1 mouse_genomes_project 7 37700225 37719278 + MGP_CBAJ_P0082854 Slc7a9 protein_coding protein_coding MGP_CBAJ_T0082855.1 MGP_CBAJ_G0031761.1 mouse_genomes_project 7 37700466 37719278 + MGP_CBAJ_P0082855 Slc7a9 protein_coding protein_coding MGP_CBAJ_T0082856.1 MGP_CBAJ_G0031761.1 mouse_genomes_project 7 37700527 37701500 + Slc7a9 protein_coding retained_intron MGP_CBAJ_T0082857.1 MGP_CBAJ_G0031761.1 mouse_genomes_project 7 37700529 37719245 + Slc7a9 protein_coding retained_intron MGP_CBAJ_T0082858.1 MGP_CBAJ_G0031761.1 mouse_genomes_project 7 37700599 37719278 + MGP_CBAJ_P0082858 Slc7a9 protein_coding protein_coding MGP_CBAJ_T0082859.1 MGP_CBAJ_G0031761.1 mouse_genomes_project 7 37701265 37708834 + MGP_CBAJ_P0082859 Slc7a9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0015511.1 MGP_CBAJ_G0013623.1 mouse_genomes_project 7 24720030 24720233 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008723.1 MGP_CBAJ_G0007037.1 mouse_genomes_project 7 32369702 32371067 + Gm29440 lincRNA lincRNA MGP_CBAJ_T0002173.1 MGP_CBAJ_G0002088.1 mouse_genomes_project 7 39171130 39173513 + TEC TEC MGP_CBAJ_T0085682.1 MGP_CBAJ_G0032578.1 mouse_genomes_project 7 132021067 132044256 - MGP_CBAJ_P0085682 Gprc5b protein_coding protein_coding MGP_CBAJ_T0086412.1 MGP_CBAJ_G0032724.1 mouse_genomes_project 7 141949421 141972839 + MGP_CBAJ_P0086412 protein_coding protein_coding MGP_CBAJ_T0086413.1 MGP_CBAJ_G0032724.1 mouse_genomes_project 7 141949900 141956796 + MGP_CBAJ_P0086413 protein_coding protein_coding MGP_CBAJ_T0086414.1 MGP_CBAJ_G0032724.1 mouse_genomes_project 7 141950140 141956423 + MGP_CBAJ_P0086414 protein_coding protein_coding MGP_CBAJ_T0086415.1 MGP_CBAJ_G0032724.1 mouse_genomes_project 7 141950140 141972832 + MGP_CBAJ_P0086415 protein_coding protein_coding MGP_CBAJ_T0086416.1 MGP_CBAJ_G0032724.1 mouse_genomes_project 7 141950446 141951317 + MGP_CBAJ_P0086416 protein_coding protein_coding MGP_CBAJ_T0086417.1 MGP_CBAJ_G0032724.1 mouse_genomes_project 7 141951328 141954655 + protein_coding processed_transcript MGP_CBAJ_T0015560.1 MGP_CBAJ_G0013672.1 mouse_genomes_project 7 44838720 44840322 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0008887.1 MGP_CBAJ_G0007153.1 mouse_genomes_project 7 126828450 126921709 - 4933406I18Rik lincRNA lincRNA MGP_CBAJ_T0008888.1 MGP_CBAJ_G0007153.1 mouse_genomes_project 7 126872587 126921569 - 4933406I18Rik lincRNA lincRNA MGP_CBAJ_T0002155.1 MGP_CBAJ_G0002070.1 mouse_genomes_project 7 336900 337235 + TEC TEC MGP_CBAJ_T0086705.1 MGP_CBAJ_G0032782.1 mouse_genomes_project 7 147313372 147336580 - MGP_CBAJ_P0086705 Oat protein_coding protein_coding MGP_CBAJ_T0085384.1 MGP_CBAJ_G0032521.1 mouse_genomes_project 7 121906611 121909531 - Dennd5a protein_coding retained_intron MGP_CBAJ_T0085385.1 MGP_CBAJ_G0032521.1 mouse_genomes_project 7 121906611 121982022 - MGP_CBAJ_P0085385 Dennd5a protein_coding protein_coding MGP_CBAJ_T0085386.1 MGP_CBAJ_G0032521.1 mouse_genomes_project 7 121906611 121982092 - MGP_CBAJ_P0085386 Dennd5a protein_coding protein_coding MGP_CBAJ_T0085387.1 MGP_CBAJ_G0032521.1 mouse_genomes_project 7 121909211 121910388 - Dennd5a protein_coding retained_intron MGP_CBAJ_T0085388.1 MGP_CBAJ_G0032521.1 mouse_genomes_project 7 121911903 121913296 - Dennd5a protein_coding retained_intron MGP_CBAJ_T0085389.1 MGP_CBAJ_G0032521.1 mouse_genomes_project 7 121925277 121938391 - Dennd5a protein_coding retained_intron MGP_CBAJ_T0085390.1 MGP_CBAJ_G0032521.1 mouse_genomes_project 7 121938987 121944973 - Dennd5a protein_coding processed_transcript MGP_CBAJ_T0085391.1 MGP_CBAJ_G0032521.1 mouse_genomes_project 7 121953408 121981945 - Dennd5a protein_coding processed_transcript MGP_CBAJ_T0084139.1 MGP_CBAJ_G0032072.1 mouse_genomes_project 7 88098189 88121736 - MGP_CBAJ_P0084139 Idh2 protein_coding protein_coding MGP_CBAJ_T0084140.1 MGP_CBAJ_G0032072.1 mouse_genomes_project 7 88098193 88121676 - MGP_CBAJ_P0084140 Idh2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084141.1 MGP_CBAJ_G0032072.1 mouse_genomes_project 7 88098372 88101745 - Idh2 protein_coding retained_intron MGP_CBAJ_T0084142.1 MGP_CBAJ_G0032072.1 mouse_genomes_project 7 88098386 88099371 - Idh2 protein_coding retained_intron MGP_CBAJ_T0084143.1 MGP_CBAJ_G0032072.1 mouse_genomes_project 7 88098402 88121648 - MGP_CBAJ_P0084143 Idh2 protein_coding protein_coding MGP_CBAJ_T0084144.1 MGP_CBAJ_G0032072.1 mouse_genomes_project 7 88099369 88104217 - MGP_CBAJ_P0084144 Idh2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0084145.1 MGP_CBAJ_G0032072.1 mouse_genomes_project 7 88101507 88102475 - Idh2 protein_coding retained_intron MGP_CBAJ_T0085371.1 MGP_CBAJ_G0032516.1 mouse_genomes_project 7 121709597 121728562 - MGP_CBAJ_P0085371 BC051019 protein_coding protein_coding MGP_CBAJ_T0085372.1 MGP_CBAJ_G0032516.1 mouse_genomes_project 7 121709600 121728626 - MGP_CBAJ_P0085372 BC051019 protein_coding protein_coding MGP_CBAJ_T0085373.1 MGP_CBAJ_G0032516.1 mouse_genomes_project 7 121713324 121720177 - MGP_CBAJ_P0085373 BC051019 protein_coding protein_coding MGP_CBAJ_T0015456.1 MGP_CBAJ_G0013568.1 mouse_genomes_project 7 1132934 1133214 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0080994.1 MGP_CBAJ_G0031222.1 mouse_genomes_project 7 1979334 1980739 + MGP_CBAJ_P0080994 Tmem190 protein_coding protein_coding MGP_CBAJ_T0080995.1 MGP_CBAJ_G0031222.1 mouse_genomes_project 7 1979348 1979756 + Tmem190 protein_coding retained_intron MGP_CBAJ_T0087353.1 MGP_CBAJ_G0032938.1 mouse_genomes_project 7 158957013 158972256 + MGP_CBAJ_P0087353 Cd81 protein_coding protein_coding MGP_CBAJ_T0087354.1 MGP_CBAJ_G0032938.1 mouse_genomes_project 7 158957068 158969935 + Cd81 protein_coding retained_intron MGP_CBAJ_T0087355.1 MGP_CBAJ_G0032938.1 mouse_genomes_project 7 158962842 158971484 + Cd81 protein_coding processed_transcript MGP_CBAJ_T0087356.1 MGP_CBAJ_G0032938.1 mouse_genomes_project 7 158970522 158971927 + Cd81 protein_coding retained_intron MGP_CBAJ_T0083543.1 MGP_CBAJ_G0031941.1 mouse_genomes_project 7 51086731 51124349 - MGP_CBAJ_P0083543 Hps5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083544.1 MGP_CBAJ_G0031941.1 mouse_genomes_project 7 51086731 51124698 - MGP_CBAJ_P0083544 Hps5 protein_coding protein_coding MGP_CBAJ_T0083545.1 MGP_CBAJ_G0031941.1 mouse_genomes_project 7 51086731 51124670 - MGP_CBAJ_P0083545 Hps5 protein_coding protein_coding MGP_CBAJ_T0083546.1 MGP_CBAJ_G0031941.1 mouse_genomes_project 7 51086734 51124432 - MGP_CBAJ_P0083546 Hps5 protein_coding unknown_likely_coding MGP_CBAJ_T0083547.1 MGP_CBAJ_G0031941.1 mouse_genomes_project 7 51086737 51124552 - MGP_CBAJ_P0083547 Hps5 protein_coding protein_coding MGP_CBAJ_T0083548.1 MGP_CBAJ_G0031941.1 mouse_genomes_project 7 51087244 51124349 - Hps5 protein_coding retained_intron MGP_CBAJ_T0083549.1 MGP_CBAJ_G0031941.1 mouse_genomes_project 7 51087505 51097698 - Hps5 protein_coding processed_transcript MGP_CBAJ_T0083550.1 MGP_CBAJ_G0031941.1 mouse_genomes_project 7 51089209 51103587 - MGP_CBAJ_P0083550 Hps5 protein_coding protein_coding MGP_CBAJ_T0083551.1 MGP_CBAJ_G0031941.1 mouse_genomes_project 7 51093579 51100658 - MGP_CBAJ_P0083551 Hps5 protein_coding protein_coding MGP_CBAJ_T0083552.1 MGP_CBAJ_G0031941.1 mouse_genomes_project 7 51095659 51097141 - Hps5 protein_coding retained_intron MGP_CBAJ_T0083553.1 MGP_CBAJ_G0031941.1 mouse_genomes_project 7 51104509 51107093 - Hps5 protein_coding retained_intron MGP_CBAJ_T0083554.1 MGP_CBAJ_G0031941.1 mouse_genomes_project 7 51115184 51124735 - MGP_CBAJ_P0083554 Hps5 protein_coding protein_coding MGP_CBAJ_T0083555.1 MGP_CBAJ_G0031941.1 mouse_genomes_project 7 51116962 51124374 - MGP_CBAJ_P0083555 Hps5 protein_coding protein_coding MGP_CBAJ_T0083556.1 MGP_CBAJ_G0031941.1 mouse_genomes_project 7 51117744 51119747 - Hps5 protein_coding processed_transcript MGP_CBAJ_T0015678.1 MGP_CBAJ_G0013790.1 mouse_genomes_project 7 135733183 135733907 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0102055.1 MGP_CBAJ_G0040085.1 mouse_genomes_project 7 8409118 8409492 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081631.1 MGP_CBAJ_G0031458.1 mouse_genomes_project 7 19293071 19307390 - MGP_CBAJ_P0081631 Tomm40 protein_coding protein_coding MGP_CBAJ_T0081632.1 MGP_CBAJ_G0031458.1 mouse_genomes_project 7 19293089 19307377 - MGP_CBAJ_P0081632 Tomm40 protein_coding protein_coding MGP_CBAJ_T0081633.1 MGP_CBAJ_G0031458.1 mouse_genomes_project 7 19293580 19302906 - Tomm40 protein_coding retained_intron MGP_CBAJ_T0081634.1 MGP_CBAJ_G0031458.1 mouse_genomes_project 7 19294627 19295103 - MGP_CBAJ_P0081634 Tomm40 protein_coding protein_coding MGP_CBAJ_T0081635.1 MGP_CBAJ_G0031458.1 mouse_genomes_project 7 19303355 19307380 - Tomm40 protein_coding retained_intron MGP_CBAJ_T0083875.1 MGP_CBAJ_G0032022.1 mouse_genomes_project 7 72742311 72779156 - MGP_CBAJ_P0083875 Aldh1a3 protein_coding protein_coding MGP_CBAJ_T0083876.1 MGP_CBAJ_G0032022.1 mouse_genomes_project 7 72751314 72757422 - Aldh1a3 protein_coding retained_intron MGP_CBAJ_T0083877.1 MGP_CBAJ_G0032022.1 mouse_genomes_project 7 72753468 72770865 - MGP_CBAJ_P0083877 Aldh1a3 protein_coding protein_coding MGP_CBAJ_T0083878.1 MGP_CBAJ_G0032022.1 mouse_genomes_project 7 72759930 72778228 - Aldh1a3 protein_coding processed_transcript MGP_CBAJ_T0083879.1 MGP_CBAJ_G0032022.1 mouse_genomes_project 7 72760376 72777340 - Aldh1a3 protein_coding processed_transcript MGP_CBAJ_T0084988.1 MGP_CBAJ_G0032286.1 mouse_genomes_project 7 113502287 113503241 + MGP_CBAJ_P0084988 Olfr554 protein_coding protein_coding MGP_CBAJ_T0010751.1 MGP_CBAJ_G0008889.1 mouse_genomes_project 7 59462674 59462861 - Gm25956 miRNA miRNA MGP_CBAJ_T0082012.1 MGP_CBAJ_G0031570.1 mouse_genomes_project 7 27804792 27818856 - MGP_CBAJ_P0082012 Gm21983 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085606.1 MGP_CBAJ_G0032563.1 mouse_genomes_project 7 129208702 129248942 + MGP_CBAJ_P0085606 Nucb2 protein_coding protein_coding MGP_CBAJ_T0085607.1 MGP_CBAJ_G0032563.1 mouse_genomes_project 7 129208717 129213936 + Nucb2 protein_coding processed_transcript MGP_CBAJ_T0085608.1 MGP_CBAJ_G0032563.1 mouse_genomes_project 7 129208748 129248801 + MGP_CBAJ_P0085608 Nucb2 protein_coding protein_coding MGP_CBAJ_T0085609.1 MGP_CBAJ_G0032563.1 mouse_genomes_project 7 129234860 129242084 + MGP_CBAJ_P0085609 Nucb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0081539.1 MGP_CBAJ_G0031433.1 mouse_genomes_project 7 18800498 18807665 - MGP_CBAJ_P0081539 Ppm1n protein_coding protein_coding MGP_CBAJ_T0081540.1 MGP_CBAJ_G0031433.1 mouse_genomes_project 7 18800535 18805998 - Ppm1n protein_coding retained_intron MGP_CBAJ_T0081541.1 MGP_CBAJ_G0031433.1 mouse_genomes_project 7 18805417 18805752 - Ppm1n protein_coding retained_intron MGP_CBAJ_T0081542.1 MGP_CBAJ_G0031433.1 mouse_genomes_project 7 18806417 18807202 - Ppm1n protein_coding retained_intron MGP_CBAJ_T0082943.1 MGP_CBAJ_G0031777.1 mouse_genomes_project 7 43878383 43911887 + MGP_CBAJ_P0082943 Vstm2b protein_coding protein_coding MGP_CBAJ_T0082944.1 MGP_CBAJ_G0031777.1 mouse_genomes_project 7 43879333 43911261 + MGP_CBAJ_P0082944 Vstm2b protein_coding protein_coding MGP_CBAJ_T0082945.1 MGP_CBAJ_G0031777.1 mouse_genomes_project 7 43879387 43882844 + MGP_CBAJ_P0082945 Vstm2b protein_coding protein_coding MGP_CBAJ_T0082946.1 MGP_CBAJ_G0031777.1 mouse_genomes_project 7 43880184 43882857 + MGP_CBAJ_P0082946 Vstm2b protein_coding protein_coding MGP_CBAJ_T0098096.1 MGP_CBAJ_G0036369.1 mouse_genomes_project 7 146770849 146770969 + n-R5s159 rRNA rRNA MGP_CBAJ_T0087471.1 MGP_CBAJ_G0032965.1 mouse_genomes_project 7 161023424 161033368 - MGP_CBAJ_P0087471 Ccnd1 protein_coding protein_coding MGP_CBAJ_T0087472.1 MGP_CBAJ_G0032965.1 mouse_genomes_project 7 161030792 161031695 - Ccnd1 protein_coding retained_intron MGP_CBAJ_T0081218.1 MGP_CBAJ_G0031325.1 mouse_genomes_project 7 11304956 11305844 - MGP_CBAJ_P0081218 Vmn1r87 protein_coding protein_coding MGP_CBAJ_T0087014.1 MGP_CBAJ_G0032873.1 mouse_genomes_project 7 156579522 156582127 + MGP_CBAJ_P0087014 Ifitm1 protein_coding protein_coding MGP_CBAJ_T0087015.1 MGP_CBAJ_G0032873.1 mouse_genomes_project 7 156580329 156582127 + MGP_CBAJ_P0087015 Ifitm1 protein_coding protein_coding MGP_CBAJ_T0087016.1 MGP_CBAJ_G0032873.1 mouse_genomes_project 7 156580341 156582127 + MGP_CBAJ_P0087016 Ifitm1 protein_coding protein_coding MGP_CBAJ_T0082998.1 MGP_CBAJ_G0031797.1 mouse_genomes_project 7 47082213 47088122 + MGP_CBAJ_P0082998 Lim2 protein_coding protein_coding MGP_CBAJ_T0083600.1 MGP_CBAJ_G0031960.1 mouse_genomes_project 7 53114007 53138789 - MGP_CBAJ_P0083600 Mrgprx2 protein_coding protein_coding MGP_CBAJ_T0083601.1 MGP_CBAJ_G0031960.1 mouse_genomes_project 7 53116014 53135593 - MGP_CBAJ_P0083601 Mrgprx2 protein_coding protein_coding MGP_CBAJ_T0085072.1 MGP_CBAJ_G0032367.1 mouse_genomes_project 7 115324996 115327653 - MGP_CBAJ_P0085072 Ubqln3 protein_coding protein_coding MGP_CBAJ_T0018107.1 MGP_CBAJ_G0015411.1 mouse_genomes_project 7 53526001 53533937 + processed_transcript processed_transcript MGP_CBAJ_T0018108.1 MGP_CBAJ_G0015411.1 mouse_genomes_project 7 53529343 53534584 + processed_transcript processed_transcript MGP_CBAJ_T0081284.1 MGP_CBAJ_G0031353.1 mouse_genomes_project 7 14749848 14757619 - MGP_CBAJ_P0081284 protein_coding protein_coding MGP_CBAJ_T0086950.1 MGP_CBAJ_G0032847.1 mouse_genomes_project 7 155918700 155919615 - MGP_CBAJ_P0086950 Olfr531 protein_coding protein_coding MGP_CBAJ_T0087464.1 MGP_CBAJ_G0032963.1 mouse_genomes_project 7 160990105 160994542 + MGP_CBAJ_P0087464 Fgf15 protein_coding protein_coding MGP_CBAJ_T0085531.1 MGP_CBAJ_G0032554.1 mouse_genomes_project 7 127067238 127080021 - MGP_CBAJ_P0085531 Cyp2r1 protein_coding protein_coding MGP_CBAJ_T0085532.1 MGP_CBAJ_G0032554.1 mouse_genomes_project 7 127067294 127080019 - MGP_CBAJ_P0085532 Cyp2r1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085533.1 MGP_CBAJ_G0032554.1 mouse_genomes_project 7 127067305 127080011 - MGP_CBAJ_P0085533 Cyp2r1 protein_coding protein_coding MGP_CBAJ_T0085534.1 MGP_CBAJ_G0032554.1 mouse_genomes_project 7 127067319 127071806 - Cyp2r1 protein_coding processed_transcript MGP_CBAJ_T0085535.1 MGP_CBAJ_G0032554.1 mouse_genomes_project 7 127067319 127071802 - MGP_CBAJ_P0085535 Cyp2r1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085536.1 MGP_CBAJ_G0032554.1 mouse_genomes_project 7 127067321 127080011 - MGP_CBAJ_P0085536 Cyp2r1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0086050.1 MGP_CBAJ_G0032658.1 mouse_genomes_project 7 140529984 140534155 + MGP_CBAJ_P0086050 Apobr protein_coding protein_coding MGP_CBAJ_T0086051.1 MGP_CBAJ_G0032658.1 mouse_genomes_project 7 140530033 140532994 + MGP_CBAJ_P0086051 Apobr protein_coding nonsense_mediated_decay MGP_CBAJ_T0086052.1 MGP_CBAJ_G0032658.1 mouse_genomes_project 7 140530034 140533413 + MGP_CBAJ_P0086052 Apobr protein_coding protein_coding MGP_CBAJ_T0086053.1 MGP_CBAJ_G0032658.1 mouse_genomes_project 7 140532122 140533488 + MGP_CBAJ_P0086053 Apobr protein_coding protein_coding MGP_CBAJ_T0086054.1 MGP_CBAJ_G0032658.1 mouse_genomes_project 7 140532716 140533368 + MGP_CBAJ_P0086054 Apobr protein_coding protein_coding MGP_CBAJ_T0018174.1 MGP_CBAJ_G0015441.1 mouse_genomes_project 7 157046220 157053835 - B230206H07Rik processed_transcript processed_transcript MGP_CBAJ_T0018175.1 MGP_CBAJ_G0015441.1 mouse_genomes_project 7 157046257 157053863 - B230206H07Rik processed_transcript processed_transcript MGP_CBAJ_T0085125.1 MGP_CBAJ_G0032393.1 mouse_genomes_project 7 115927158 115930245 - MGP_CBAJ_P0085125 protein_coding protein_coding MGP_CBAJ_T0085129.1 MGP_CBAJ_G0032393.1 mouse_genomes_project 7 115927807 115930352 - MGP_CBAJ_P0085129 protein_coding protein_coding MGP_CBAJ_T0082419.1 MGP_CBAJ_G0031671.1 mouse_genomes_project 7 31523042 31532105 - MGP_CBAJ_P0082419 Zfp146 protein_coding protein_coding MGP_CBAJ_T0082420.1 MGP_CBAJ_G0031671.1 mouse_genomes_project 7 31524492 31525142 - Zfp146 protein_coding processed_transcript MGP_CBAJ_T0083294.1 MGP_CBAJ_G0031881.1 mouse_genomes_project 7 49293269 49312030 + MGP_CBAJ_P0083294 Tead2 protein_coding protein_coding MGP_CBAJ_T0083295.1 MGP_CBAJ_G0031881.1 mouse_genomes_project 7 49293307 49298441 + Tead2 protein_coding retained_intron MGP_CBAJ_T0083296.1 MGP_CBAJ_G0031881.1 mouse_genomes_project 7 49293326 49295723 + Tead2 protein_coding retained_intron MGP_CBAJ_T0083297.1 MGP_CBAJ_G0031881.1 mouse_genomes_project 7 49293339 49303313 + MGP_CBAJ_P0083297 Tead2 protein_coding protein_coding MGP_CBAJ_T0083298.1 MGP_CBAJ_G0031881.1 mouse_genomes_project 7 49293368 49312030 + MGP_CBAJ_P0083298 Tead2 protein_coding protein_coding MGP_CBAJ_T0083299.1 MGP_CBAJ_G0031881.1 mouse_genomes_project 7 49294189 49296686 + MGP_CBAJ_P0083299 Tead2 protein_coding protein_coding MGP_CBAJ_T0083300.1 MGP_CBAJ_G0031881.1 mouse_genomes_project 7 49294727 49298494 + Tead2 protein_coding retained_intron MGP_CBAJ_T0083301.1 MGP_CBAJ_G0031881.1 mouse_genomes_project 7 49294727 49312047 + MGP_CBAJ_P0083301 Tead2 protein_coding protein_coding MGP_CBAJ_T0083302.1 MGP_CBAJ_G0031881.1 mouse_genomes_project 7 49295555 49301262 + Tead2 protein_coding processed_transcript MGP_CBAJ_T0083303.1 MGP_CBAJ_G0031881.1 mouse_genomes_project 7 49297424 49298222 + Tead2 protein_coding retained_intron MGP_CBAJ_T0083304.1 MGP_CBAJ_G0031881.1 mouse_genomes_project 7 49297962 49298717 + Tead2 protein_coding processed_transcript MGP_CBAJ_T0083305.1 MGP_CBAJ_G0031881.1 mouse_genomes_project 7 49310558 49311497 + Tead2 protein_coding processed_transcript MGP_CBAJ_T0102077.1 MGP_CBAJ_G0040107.1 mouse_genomes_project 7 12746251 12746822 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085012.1 MGP_CBAJ_G0032308.1 mouse_genomes_project 7 114040795 114041699 + MGP_CBAJ_P0085012 protein_coding protein_coding MGP_CBAJ_T0018120.1 MGP_CBAJ_G0015416.1 mouse_genomes_project 7 69988566 69991732 + Gm27252 processed_transcript lincRNA MGP_CBAJ_T0018121.1 MGP_CBAJ_G0015416.1 mouse_genomes_project 7 69990007 69991563 + Gm27252 processed_transcript antisense MGP_CBAJ_T0005218.1 MGP_CBAJ_G0004421.1 mouse_genomes_project 7 142454549 142456265 - Gm45108 antisense antisense MGP_CBAJ_T0082993.1 MGP_CBAJ_G0031794.1 mouse_genomes_project 7 47050917 47067744 + protein_coding retained_intron MGP_CBAJ_T0082994.1 MGP_CBAJ_G0031794.1 mouse_genomes_project 7 47050946 47067744 + protein_coding retained_intron MGP_CBAJ_T0082995.1 MGP_CBAJ_G0031794.1 mouse_genomes_project 7 47051151 47059362 + protein_coding retained_intron MGP_CBAJ_T0102084.1 MGP_CBAJ_G0040114.1 mouse_genomes_project 7 13061546 13062557 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0085297.1 MGP_CBAJ_G0032469.1 mouse_genomes_project 7 119357172 119358340 - MGP_CBAJ_P0085297 5330417H12Rik protein_coding protein_coding MGP_CBAJ_T0102115.1 MGP_CBAJ_G0040144.1 mouse_genomes_project 7 35793929 35795692 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0083516.1 MGP_CBAJ_G0031934.1 mouse_genomes_project 7 50656630 50659234 + MGP_CBAJ_P0083516 Myod1 protein_coding protein_coding MGP_CBAJ_T0010787.1 MGP_CBAJ_G0008925.1 mouse_genomes_project 7 112141007 112141075 + Mir139 miRNA miRNA MGP_CBAJ_T0008734.1 MGP_CBAJ_G0007047.1 mouse_genomes_project 7 37332982 37339386 - Gm45229 lincRNA lincRNA MGP_CBAJ_T0084312.1 MGP_CBAJ_G0032099.1 mouse_genomes_project 7 89698334 89703231 - Ap3b2 protein_coding retained_intron MGP_CBAJ_T0084313.1 MGP_CBAJ_G0032099.1 mouse_genomes_project 7 89698336 89733481 - MGP_CBAJ_P0084313 Ap3b2 protein_coding protein_coding MGP_CBAJ_T0084314.1 MGP_CBAJ_G0032099.1 mouse_genomes_project 7 89712327 89733262 - Ap3b2 protein_coding retained_intron MGP_CBAJ_T0084315.1 MGP_CBAJ_G0032099.1 mouse_genomes_project 7 89716906 89718194 - Ap3b2 protein_coding processed_transcript MGP_CBAJ_T0084316.1 MGP_CBAJ_G0032099.1 mouse_genomes_project 7 89719432 89733339 - MGP_CBAJ_P0084316 Ap3b2 protein_coding protein_coding MGP_CBAJ_T0086706.1 MGP_CBAJ_G0032783.1 mouse_genomes_project 7 147355361 147360121 - MGP_CBAJ_P0086706 Nkx1-2 protein_coding protein_coding MGP_CBAJ_T0102156.1 MGP_CBAJ_G0040185.1 mouse_genomes_project 7 52659740 52660689 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0081842.1 MGP_CBAJ_G0031524.1 mouse_genomes_project 7 25191470 25255103 - MGP_CBAJ_P0081842 Pou2f2 protein_coding protein_coding MGP_CBAJ_T0081843.1 MGP_CBAJ_G0031524.1 mouse_genomes_project 7 25200173 25255103 - MGP_CBAJ_P0081843 Pou2f2 protein_coding protein_coding MGP_CBAJ_T0081844.1 MGP_CBAJ_G0031524.1 mouse_genomes_project 7 25200217 25255103 - MGP_CBAJ_P0081844 Pou2f2 protein_coding protein_coding MGP_CBAJ_T0081845.1 MGP_CBAJ_G0031524.1 mouse_genomes_project 7 25200217 25255092 - MGP_CBAJ_P0081845 Pou2f2 protein_coding protein_coding MGP_CBAJ_T0081846.1 MGP_CBAJ_G0031524.1 mouse_genomes_project 7 25200374 25241248 - MGP_CBAJ_P0081846 Pou2f2 protein_coding protein_coding MGP_CBAJ_T0081847.1 MGP_CBAJ_G0031524.1 mouse_genomes_project 7 25200945 25255127 - MGP_CBAJ_P0081847 Pou2f2 protein_coding protein_coding MGP_CBAJ_T0081848.1 MGP_CBAJ_G0031524.1 mouse_genomes_project 7 25208322 25240376 - MGP_CBAJ_P0081848 Pou2f2 protein_coding protein_coding MGP_CBAJ_T0081849.1 MGP_CBAJ_G0031524.1 mouse_genomes_project 7 25240135 25284222 - Pou2f2 protein_coding retained_intron MGP_CBAJ_T0099535.1 MGP_CBAJ_G0037790.1 mouse_genomes_project 7 158272540 158272648 + Gm26143 snRNA snRNA MGP_CBAJ_T0086521.1 MGP_CBAJ_G0032746.1 mouse_genomes_project 7 142512780 142516354 - MGP_CBAJ_P0086521 9130023H24Rik protein_coding protein_coding MGP_CBAJ_T0015475.1 MGP_CBAJ_G0013587.1 mouse_genomes_project 7 10845548 10846535 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0082602.1 MGP_CBAJ_G0031712.1 mouse_genomes_project 7 32161642 32191126 + Sbsn protein_coding processed_transcript MGP_CBAJ_T0082603.1 MGP_CBAJ_G0031712.1 mouse_genomes_project 7 32179668 32191133 + MGP_CBAJ_P0082603 Sbsn protein_coding protein_coding MGP_CBAJ_T0082604.1 MGP_CBAJ_G0031712.1 mouse_genomes_project 7 32179668 32191134 + MGP_CBAJ_P0082604 Sbsn protein_coding protein_coding MGP_CBAJ_T0082605.1 MGP_CBAJ_G0031712.1 mouse_genomes_project 7 32179672 32191134 + MGP_CBAJ_P0082605 Sbsn protein_coding protein_coding MGP_CBAJ_T0082606.1 MGP_CBAJ_G0031712.1 mouse_genomes_project 7 32179756 32191134 + MGP_CBAJ_P0082606 Sbsn protein_coding protein_coding MGP_CBAJ_T0082607.1 MGP_CBAJ_G0031712.1 mouse_genomes_project 7 32187627 32191126 + MGP_CBAJ_P0082607 Sbsn protein_coding protein_coding MGP_CBAJ_T0086929.1 MGP_CBAJ_G0032835.1 mouse_genomes_project 7 155620900 155632715 + MGP_CBAJ_P0086929 protein_coding protein_coding MGP_CBAJ_T0086930.1 MGP_CBAJ_G0032835.1 mouse_genomes_project 7 155620951 155632715 + MGP_CBAJ_P0086930 protein_coding protein_coding MGP_CBAJ_T0082332.1 MGP_CBAJ_G0031649.1 mouse_genomes_project 7 30418249 30420121 - MGP_CBAJ_P0082332 2200002D01Rik protein_coding protein_coding MGP_CBAJ_T0082333.1 MGP_CBAJ_G0031649.1 mouse_genomes_project 7 30419260 30420027 - 2200002D01Rik protein_coding retained_intron MGP_CBAJ_T0008787.1 MGP_CBAJ_G0007087.1 mouse_genomes_project 7 72381474 72382046 - Gm45081 lincRNA lincRNA MGP_CBAJ_T0086732.1 MGP_CBAJ_G0032788.1 mouse_genomes_project 7 147732770 147770562 + MGP_CBAJ_P0086732 Zranb1 protein_coding protein_coding MGP_CBAJ_T0086733.1 MGP_CBAJ_G0032788.1 mouse_genomes_project 7 147767471 147769379 + Zranb1 protein_coding retained_intron MGP_CBAJ_T0015622.1 MGP_CBAJ_G0013734.1 mouse_genomes_project 7 89035502 89035826 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0085030.1 MGP_CBAJ_G0032325.1 mouse_genomes_project 7 114499971 114500922 + MGP_CBAJ_P0085030 Olfr608 protein_coding protein_coding MGP_CBAJ_T0083105.1 MGP_CBAJ_G0031832.1 mouse_genomes_project 7 48375772 48411264 + MGP_CBAJ_P0083105 Lrrc4b protein_coding protein_coding MGP_CBAJ_T0083106.1 MGP_CBAJ_G0031832.1 mouse_genomes_project 7 48389700 48413256 + MGP_CBAJ_P0083106 Lrrc4b protein_coding protein_coding MGP_CBAJ_T0083107.1 MGP_CBAJ_G0031832.1 mouse_genomes_project 7 48389952 48411310 + MGP_CBAJ_P0083107 Lrrc4b protein_coding protein_coding MGP_CBAJ_T0085122.1 MGP_CBAJ_G0032390.1 mouse_genomes_project 7 115826675 115827644 + MGP_CBAJ_P0085122 Olfr659 protein_coding protein_coding MGP_CBAJ_T0008807.1 MGP_CBAJ_G0007102.1 mouse_genomes_project 7 79724696 79725036 - Gm28744 lincRNA lincRNA MGP_CBAJ_T0008954.1 MGP_CBAJ_G0007195.1 mouse_genomes_project 7 150704726 150721934 - 5830432E09Rik lincRNA lincRNA MGP_CBAJ_T0008955.1 MGP_CBAJ_G0007195.1 mouse_genomes_project 7 150718107 150721965 - 5830432E09Rik lincRNA lincRNA MGP_CBAJ_T0085364.1 MGP_CBAJ_G0032514.1 mouse_genomes_project 7 121499468 121597496 - MGP_CBAJ_P0085364 St5 protein_coding protein_coding MGP_CBAJ_T0085365.1 MGP_CBAJ_G0032514.1 mouse_genomes_project 7 121499468 121597496 - MGP_CBAJ_P0085365 St5 protein_coding protein_coding MGP_CBAJ_T0085366.1 MGP_CBAJ_G0032514.1 mouse_genomes_project 7 121499477 121596917 - MGP_CBAJ_P0085366 St5 protein_coding protein_coding MGP_CBAJ_T0085367.1 MGP_CBAJ_G0032514.1 mouse_genomes_project 7 121499477 121596917 - MGP_CBAJ_P0085367 St5 protein_coding protein_coding MGP_CBAJ_T0080828.1 MGP_CBAJ_G0031193.1 mouse_genomes_project 7 737528 742029 + MGP_CBAJ_P0080828 Rps9 protein_coding protein_coding MGP_CBAJ_T0080829.1 MGP_CBAJ_G0031193.1 mouse_genomes_project 7 737573 742027 + MGP_CBAJ_P0080829 Rps9 protein_coding protein_coding MGP_CBAJ_T0080830.1 MGP_CBAJ_G0031193.1 mouse_genomes_project 7 737576 738413 + Rps9 protein_coding retained_intron MGP_CBAJ_T0080831.1 MGP_CBAJ_G0031193.1 mouse_genomes_project 7 737577 738257 + MGP_CBAJ_P0080831 Rps9 protein_coding protein_coding MGP_CBAJ_T0080832.1 MGP_CBAJ_G0031193.1 mouse_genomes_project 7 737583 738993 + Rps9 protein_coding retained_intron MGP_CBAJ_T0080833.1 MGP_CBAJ_G0031193.1 mouse_genomes_project 7 737587 741992 + MGP_CBAJ_P0080833 Rps9 protein_coding protein_coding MGP_CBAJ_T0080834.1 MGP_CBAJ_G0031193.1 mouse_genomes_project 7 737821 741226 + MGP_CBAJ_P0080834 Rps9 protein_coding protein_coding MGP_CBAJ_T0080835.1 MGP_CBAJ_G0031193.1 mouse_genomes_project 7 737855 742008 + MGP_CBAJ_P0080835 Rps9 protein_coding protein_coding MGP_CBAJ_T0080836.1 MGP_CBAJ_G0031193.1 mouse_genomes_project 7 737899 742026 + MGP_CBAJ_P0080836 Rps9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0080837.1 MGP_CBAJ_G0031193.1 mouse_genomes_project 7 739179 741364 + Rps9 protein_coding retained_intron MGP_CBAJ_T0086473.1 MGP_CBAJ_G0032737.1 mouse_genomes_project 7 142140811 142143732 - MGP_CBAJ_P0086473 Prss36 protein_coding unknown_likely_coding MGP_CBAJ_T0086474.1 MGP_CBAJ_G0032737.1 mouse_genomes_project 7 142140819 142143701 - Prss36 protein_coding processed_transcript MGP_CBAJ_T0086475.1 MGP_CBAJ_G0032737.1 mouse_genomes_project 7 142140819 142143661 - Prss36 protein_coding processed_transcript MGP_CBAJ_T0086476.1 MGP_CBAJ_G0032737.1 mouse_genomes_project 7 142140819 142157472 - MGP_CBAJ_P0086476 Prss36 protein_coding protein_coding MGP_CBAJ_T0086477.1 MGP_CBAJ_G0032737.1 mouse_genomes_project 7 142140819 142157472 - MGP_CBAJ_P0086477 Prss36 protein_coding protein_coding MGP_CBAJ_T0086478.1 MGP_CBAJ_G0032737.1 mouse_genomes_project 7 142140980 142143632 - MGP_CBAJ_P0086478 Prss36 protein_coding protein_coding MGP_CBAJ_T0086479.1 MGP_CBAJ_G0032737.1 mouse_genomes_project 7 142141083 142143611 - MGP_CBAJ_P0086479 Prss36 protein_coding protein_coding MGP_CBAJ_T0086480.1 MGP_CBAJ_G0032737.1 mouse_genomes_project 7 142141141 142144279 - Prss36 protein_coding retained_intron MGP_CBAJ_T0086481.1 MGP_CBAJ_G0032737.1 mouse_genomes_project 7 142141188 142143696 - Prss36 protein_coding processed_transcript MGP_CBAJ_T0081859.1 MGP_CBAJ_G0031529.1 mouse_genomes_project 7 25422449 25457594 + MGP_CBAJ_P0081859 Cic protein_coding protein_coding MGP_CBAJ_T0081860.1 MGP_CBAJ_G0031529.1 mouse_genomes_project 7 25423132 25426012 + MGP_CBAJ_P0081860 Cic protein_coding protein_coding MGP_CBAJ_T0081861.1 MGP_CBAJ_G0031529.1 mouse_genomes_project 7 25433161 25442051 + Cic protein_coding processed_transcript MGP_CBAJ_T0081862.1 MGP_CBAJ_G0031529.1 mouse_genomes_project 7 25434387 25442014 + Cic protein_coding processed_transcript MGP_CBAJ_T0081863.1 MGP_CBAJ_G0031529.1 mouse_genomes_project 7 25436925 25457583 + MGP_CBAJ_P0081863 Cic protein_coding protein_coding MGP_CBAJ_T0081864.1 MGP_CBAJ_G0031529.1 mouse_genomes_project 7 25436925 25457580 + MGP_CBAJ_P0081864 Cic protein_coding protein_coding MGP_CBAJ_T0081865.1 MGP_CBAJ_G0031529.1 mouse_genomes_project 7 25439891 25448424 + MGP_CBAJ_P0081865 Cic protein_coding protein_coding MGP_CBAJ_T0081866.1 MGP_CBAJ_G0031529.1 mouse_genomes_project 7 25440298 25442277 + Cic protein_coding processed_transcript MGP_CBAJ_T0081867.1 MGP_CBAJ_G0031529.1 mouse_genomes_project 7 25441751 25442766 + Cic protein_coding retained_intron MGP_CBAJ_T0081868.1 MGP_CBAJ_G0031529.1 mouse_genomes_project 7 25442904 25457577 + Cic protein_coding retained_intron MGP_CBAJ_T0081869.1 MGP_CBAJ_G0031529.1 mouse_genomes_project 7 25446344 25446788 + Cic protein_coding retained_intron MGP_CBAJ_T0081870.1 MGP_CBAJ_G0031529.1 mouse_genomes_project 7 25448252 25457580 + MGP_CBAJ_P0081870 Cic protein_coding protein_coding MGP_CBAJ_T0081871.1 MGP_CBAJ_G0031529.1 mouse_genomes_project 7 25448289 25451991 + Cic protein_coding retained_intron MGP_CBAJ_T0081872.1 MGP_CBAJ_G0031529.1 mouse_genomes_project 7 25451847 25452374 + Cic protein_coding retained_intron MGP_CBAJ_T0081873.1 MGP_CBAJ_G0031529.1 mouse_genomes_project 7 25452932 25457580 + MGP_CBAJ_P0081873 Cic protein_coding protein_coding MGP_CBAJ_T0002200.1 MGP_CBAJ_G0002115.1 mouse_genomes_project 7 61442957 61446977 - TEC TEC MGP_CBAJ_T0081042.1 MGP_CBAJ_G0031245.1 mouse_genomes_project 7 2327912 2345768 + MGP_CBAJ_P0081042 Epn1 protein_coding protein_coding MGP_CBAJ_T0081043.1 MGP_CBAJ_G0031245.1 mouse_genomes_project 7 2327917 2337540 + MGP_CBAJ_P0081043 Epn1 protein_coding protein_coding MGP_CBAJ_T0081044.1 MGP_CBAJ_G0031245.1 mouse_genomes_project 7 2327941 2345776 + MGP_CBAJ_P0081044 Epn1 protein_coding unknown_likely_coding MGP_CBAJ_T0081045.1 MGP_CBAJ_G0031245.1 mouse_genomes_project 7 2327945 2331483 + MGP_CBAJ_P0081045 Epn1 protein_coding protein_coding MGP_CBAJ_T0081046.1 MGP_CBAJ_G0031245.1 mouse_genomes_project 7 2327970 2345766 + MGP_CBAJ_P0081046 Epn1 protein_coding protein_coding MGP_CBAJ_T0081047.1 MGP_CBAJ_G0031245.1 mouse_genomes_project 7 2331231 2342762 + Epn1 protein_coding processed_transcript MGP_CBAJ_T0081048.1 MGP_CBAJ_G0031245.1 mouse_genomes_project 7 2337416 2340540 + Epn1 protein_coding retained_intron MGP_CBAJ_T0083114.1 MGP_CBAJ_G0031834.1 mouse_genomes_project 7 48417882 48421553 + MGP_CBAJ_P0083114 Josd2 protein_coding protein_coding MGP_CBAJ_T0083115.1 MGP_CBAJ_G0031834.1 mouse_genomes_project 7 48417908 48420081 + Josd2 protein_coding retained_intron MGP_CBAJ_T0083116.1 MGP_CBAJ_G0031834.1 mouse_genomes_project 7 48417924 48421550 + MGP_CBAJ_P0083116 Josd2 protein_coding protein_coding MGP_CBAJ_T0083117.1 MGP_CBAJ_G0031834.1 mouse_genomes_project 7 48417925 48421552 + MGP_CBAJ_P0083117 Josd2 protein_coding protein_coding MGP_CBAJ_T0083118.1 MGP_CBAJ_G0031834.1 mouse_genomes_project 7 48417938 48421437 + MGP_CBAJ_P0083118 Josd2 protein_coding protein_coding MGP_CBAJ_T0083119.1 MGP_CBAJ_G0031834.1 mouse_genomes_project 7 48417941 48421563 + MGP_CBAJ_P0083119 Josd2 protein_coding protein_coding MGP_CBAJ_T0083120.1 MGP_CBAJ_G0031834.1 mouse_genomes_project 7 48417945 48419215 + Josd2 protein_coding retained_intron MGP_CBAJ_T0083121.1 MGP_CBAJ_G0031834.1 mouse_genomes_project 7 48417947 48421549 + MGP_CBAJ_P0083121 Josd2 protein_coding protein_coding MGP_CBAJ_T0083122.1 MGP_CBAJ_G0031834.1 mouse_genomes_project 7 48417952 48419337 + Josd2 protein_coding retained_intron MGP_CBAJ_T0083123.1 MGP_CBAJ_G0031834.1 mouse_genomes_project 7 48417974 48421522 + MGP_CBAJ_P0083123 Josd2 protein_coding protein_coding MGP_CBAJ_T0083124.1 MGP_CBAJ_G0031834.1 mouse_genomes_project 7 48417978 48419252 + Josd2 protein_coding retained_intron MGP_CBAJ_T0083125.1 MGP_CBAJ_G0031834.1 mouse_genomes_project 7 48417987 48421077 + MGP_CBAJ_P0083125 Josd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083126.1 MGP_CBAJ_G0031834.1 mouse_genomes_project 7 48417991 48419751 + Josd2 protein_coding processed_transcript MGP_CBAJ_T0083127.1 MGP_CBAJ_G0031834.1 mouse_genomes_project 7 48417991 48421552 + MGP_CBAJ_P0083127 Josd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083128.1 MGP_CBAJ_G0031834.1 mouse_genomes_project 7 48417996 48421544 + MGP_CBAJ_P0083128 Josd2 protein_coding protein_coding MGP_CBAJ_T0083129.1 MGP_CBAJ_G0031834.1 mouse_genomes_project 7 48418053 48421553 + Josd2 protein_coding retained_intron MGP_CBAJ_T0083130.1 MGP_CBAJ_G0031834.1 mouse_genomes_project 7 48418084 48418873 + Josd2 protein_coding retained_intron MGP_CBAJ_T0083131.1 MGP_CBAJ_G0031834.1 mouse_genomes_project 7 48418728 48421504 + Josd2 protein_coding processed_transcript MGP_CBAJ_T0086456.1 MGP_CBAJ_G0032733.1 mouse_genomes_project 7 142095056 142097611 - MGP_CBAJ_P0086456 Vkorc1 protein_coding protein_coding MGP_CBAJ_T0086457.1 MGP_CBAJ_G0032733.1 mouse_genomes_project 7 142095058 142097245 - MGP_CBAJ_P0086457 Vkorc1 protein_coding protein_coding MGP_CBAJ_T0086458.1 MGP_CBAJ_G0032733.1 mouse_genomes_project 7 142095231 142097303 - MGP_CBAJ_P0086458 Vkorc1 protein_coding protein_coding MGP_CBAJ_T0008832.1 MGP_CBAJ_G0007122.1 mouse_genomes_project 7 86648223 86648500 + 1700011D18Rik lincRNA lincRNA MGP_CBAJ_T0086177.1 MGP_CBAJ_G0032676.1 mouse_genomes_project 7 140857593 140860999 + MGP_CBAJ_P0086177 Hirip3 protein_coding protein_coding MGP_CBAJ_T0086178.1 MGP_CBAJ_G0032676.1 mouse_genomes_project 7 140858060 140859026 + Hirip3 protein_coding retained_intron MGP_CBAJ_T0086179.1 MGP_CBAJ_G0032676.1 mouse_genomes_project 7 140858085 140859347 + Hirip3 protein_coding retained_intron MGP_CBAJ_T0086180.1 MGP_CBAJ_G0032676.1 mouse_genomes_project 7 140858088 140859793 + Hirip3 protein_coding processed_transcript MGP_CBAJ_T0086181.1 MGP_CBAJ_G0032676.1 mouse_genomes_project 7 140858102 140859053 + MGP_CBAJ_P0086181 Hirip3 protein_coding protein_coding MGP_CBAJ_T0086182.1 MGP_CBAJ_G0032676.1 mouse_genomes_project 7 140859464 140860150 + Hirip3 protein_coding retained_intron MGP_CBAJ_T0086183.1 MGP_CBAJ_G0032676.1 mouse_genomes_project 7 140860037 140860540 + Hirip3 protein_coding retained_intron MGP_CBAJ_T0015651.1 MGP_CBAJ_G0013763.1 mouse_genomes_project 7 110665421 110666633 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0087239.1 MGP_CBAJ_G0032917.1 mouse_genomes_project 7 157975811 157979216 + MGP_CBAJ_P0087239 protein_coding protein_coding MGP_CBAJ_T0085223.1 MGP_CBAJ_G0032430.1 mouse_genomes_project 7 117134264 117139220 - MGP_CBAJ_P0085223 Rrp8 protein_coding protein_coding MGP_CBAJ_T0085224.1 MGP_CBAJ_G0032430.1 mouse_genomes_project 7 117134461 117139815 - MGP_CBAJ_P0085224 Rrp8 protein_coding protein_coding MGP_CBAJ_T0085225.1 MGP_CBAJ_G0032430.1 mouse_genomes_project 7 117134697 117135739 - Rrp8 protein_coding retained_intron MGP_CBAJ_T0085226.1 MGP_CBAJ_G0032430.1 mouse_genomes_project 7 117135063 117136121 - Rrp8 protein_coding processed_transcript MGP_CBAJ_T0085227.1 MGP_CBAJ_G0032430.1 mouse_genomes_project 7 117135063 117136004 - Rrp8 protein_coding retained_intron MGP_CBAJ_T0085228.1 MGP_CBAJ_G0032430.1 mouse_genomes_project 7 117136749 117138812 - Rrp8 protein_coding processed_transcript MGP_CBAJ_T0081256.1 MGP_CBAJ_G0031339.1 mouse_genomes_project 7 12606993 12643758 - MGP_CBAJ_P0081256 Sult2a6 protein_coding protein_coding MGP_CBAJ_T0081257.1 MGP_CBAJ_G0031339.1 mouse_genomes_project 7 12607001 12643758 - MGP_CBAJ_P0081257 Sult2a6 protein_coding protein_coding MGP_CBAJ_T0084319.1 MGP_CBAJ_G0032101.1 mouse_genomes_project 7 89772744 89808933 - MGP_CBAJ_P0084319 Fsd2 protein_coding protein_coding MGP_CBAJ_T0002212.1 MGP_CBAJ_G0002127.1 mouse_genomes_project 7 80596709 80598781 + TEC TEC MGP_CBAJ_T0008824.1 MGP_CBAJ_G0007116.1 mouse_genomes_project 7 81295879 81307003 - Gm45004 lincRNA lincRNA MGP_CBAJ_T0008859.1 MGP_CBAJ_G0007133.1 mouse_genomes_project 7 93074941 93122860 + lincRNA lincRNA MGP_CBAJ_T0005152.1 MGP_CBAJ_G0004376.1 mouse_genomes_project 7 87657513 87659582 + 9330171B17Rik antisense antisense MGP_CBAJ_T0005153.1 MGP_CBAJ_G0004376.1 mouse_genomes_project 7 87657601 87659584 + 9330171B17Rik antisense antisense MGP_CBAJ_T0099510.1 MGP_CBAJ_G0037765.1 mouse_genomes_project 7 119902462 119902520 - Gm25424 snRNA snRNA MGP_CBAJ_T0081908.1 MGP_CBAJ_G0031539.1 mouse_genomes_project 7 25806507 25807780 - MGP_CBAJ_P0081908 Erich4 protein_coding protein_coding MGP_CBAJ_T0005169.1 MGP_CBAJ_G0004388.1 mouse_genomes_project 7 102308762 102316058 - 4632427E13Rik antisense antisense MGP_CBAJ_T0005170.1 MGP_CBAJ_G0004388.1 mouse_genomes_project 7 102312233 102316067 - 4632427E13Rik antisense antisense MGP_CBAJ_T0005171.1 MGP_CBAJ_G0004388.1 mouse_genomes_project 7 102312254 102316067 - 4632427E13Rik antisense antisense MGP_CBAJ_T0005172.1 MGP_CBAJ_G0004388.1 mouse_genomes_project 7 102315300 102316058 - 4632427E13Rik antisense antisense MGP_CBAJ_T0085508.1 MGP_CBAJ_G0032547.1 mouse_genomes_project 7 125927924 125987692 + MGP_CBAJ_P0085508 Far1 protein_coding protein_coding MGP_CBAJ_T0085509.1 MGP_CBAJ_G0032547.1 mouse_genomes_project 7 125927951 125966526 + Far1 protein_coding retained_intron MGP_CBAJ_T0085510.1 MGP_CBAJ_G0032547.1 mouse_genomes_project 7 125927951 125963608 + MGP_CBAJ_P0085510 Far1 protein_coding protein_coding MGP_CBAJ_T0085511.1 MGP_CBAJ_G0032547.1 mouse_genomes_project 7 125927951 125987693 + MGP_CBAJ_P0085511 Far1 protein_coding protein_coding MGP_CBAJ_T0085512.1 MGP_CBAJ_G0032547.1 mouse_genomes_project 7 125927952 125986640 + MGP_CBAJ_P0085512 Far1 protein_coding protein_coding MGP_CBAJ_T0085513.1 MGP_CBAJ_G0032547.1 mouse_genomes_project 7 125927967 125966061 + MGP_CBAJ_P0085513 Far1 protein_coding protein_coding MGP_CBAJ_T0085514.1 MGP_CBAJ_G0032547.1 mouse_genomes_project 7 125927971 125940407 + Far1 protein_coding retained_intron MGP_CBAJ_T0085515.1 MGP_CBAJ_G0032547.1 mouse_genomes_project 7 125928188 125955416 + MGP_CBAJ_P0085515 Far1 protein_coding protein_coding MGP_CBAJ_T0085516.1 MGP_CBAJ_G0032547.1 mouse_genomes_project 7 125963485 125969161 + Far1 protein_coding retained_intron MGP_CBAJ_T0085517.1 MGP_CBAJ_G0032547.1 mouse_genomes_project 7 125977096 125984334 + Far1 protein_coding retained_intron MGP_CBAJ_T0085518.1 MGP_CBAJ_G0032547.1 mouse_genomes_project 7 125982283 125984389 + Far1 protein_coding retained_intron MGP_CBAJ_T0010778.1 MGP_CBAJ_G0008916.1 mouse_genomes_project 7 86700502 86700599 + Mir7-2 miRNA miRNA MGP_CBAJ_T0010790.1 MGP_CBAJ_G0008928.1 mouse_genomes_project 7 122921761 122921868 + miRNA miRNA MGP_CBAJ_T0005088.1 MGP_CBAJ_G0004329.1 mouse_genomes_project 7 25556006 25631516 + antisense antisense MGP_CBAJ_T0005089.1 MGP_CBAJ_G0004329.1 mouse_genomes_project 7 25556010 25564910 + antisense antisense MGP_CBAJ_T0005090.1 MGP_CBAJ_G0004329.1 mouse_genomes_project 7 25563978 25564747 + antisense antisense MGP_CBAJ_T0084277.1 MGP_CBAJ_G0032092.1 mouse_genomes_project 7 89032566 89086071 - Sec11a protein_coding processed_transcript MGP_CBAJ_T0084278.1 MGP_CBAJ_G0032092.1 mouse_genomes_project 7 89035393 89086039 - MGP_CBAJ_P0084278 Sec11a protein_coding protein_coding MGP_CBAJ_T0084279.1 MGP_CBAJ_G0032092.1 mouse_genomes_project 7 89047906 89061279 - Sec11a protein_coding processed_transcript MGP_CBAJ_T0084280.1 MGP_CBAJ_G0032092.1 mouse_genomes_project 7 89047906 89059187 - Sec11a protein_coding retained_intron MGP_CBAJ_T0084281.1 MGP_CBAJ_G0032092.1 mouse_genomes_project 7 89047906 89086306 - MGP_CBAJ_P0084281 Sec11a protein_coding protein_coding MGP_CBAJ_T0084282.1 MGP_CBAJ_G0032092.1 mouse_genomes_project 7 89048095 89048860 - Sec11a protein_coding retained_intron MGP_CBAJ_T0084283.1 MGP_CBAJ_G0032092.1 mouse_genomes_project 7 89048190 89086306 - MGP_CBAJ_P0084283 Sec11a protein_coding protein_coding MGP_CBAJ_T0084284.1 MGP_CBAJ_G0032092.1 mouse_genomes_project 7 89048292 89086037 - Sec11a protein_coding processed_transcript MGP_CBAJ_T0084285.1 MGP_CBAJ_G0032092.1 mouse_genomes_project 7 89048618 89086306 - MGP_CBAJ_P0084285 Sec11a protein_coding protein_coding MGP_CBAJ_T0084286.1 MGP_CBAJ_G0032092.1 mouse_genomes_project 7 89053424 89086268 - Sec11a protein_coding retained_intron MGP_CBAJ_T0010727.1 MGP_CBAJ_G0008865.1 mouse_genomes_project 7 27813656 27813744 - Mir3101 miRNA miRNA MGP_CBAJ_T0085046.1 MGP_CBAJ_G0032341.1 mouse_genomes_project 7 114875283 114876453 - MGP_CBAJ_P0085046 Olfr69 protein_coding protein_coding MGP_CBAJ_T0086015.1 MGP_CBAJ_G0032653.1 mouse_genomes_project 7 140429113 140433318 + MGP_CBAJ_P0086015 Tufm protein_coding protein_coding MGP_CBAJ_T0086017.1 MGP_CBAJ_G0032653.1 mouse_genomes_project 7 140429130 140433322 + MGP_CBAJ_P0086017 Tufm protein_coding protein_coding MGP_CBAJ_T0086018.1 MGP_CBAJ_G0032653.1 mouse_genomes_project 7 140429381 140430699 + Tufm protein_coding processed_transcript MGP_CBAJ_T0086019.1 MGP_CBAJ_G0032653.1 mouse_genomes_project 7 140430366 140431641 + Tufm protein_coding retained_intron MGP_CBAJ_T0086020.1 MGP_CBAJ_G0032653.1 mouse_genomes_project 7 140430438 140431883 + MGP_CBAJ_P0086020 Tufm protein_coding protein_coding MGP_CBAJ_T0086021.1 MGP_CBAJ_G0032653.1 mouse_genomes_project 7 140431878 140432821 + MGP_CBAJ_P0086021 Tufm protein_coding protein_coding MGP_CBAJ_T0086220.1 MGP_CBAJ_G0032684.1 mouse_genomes_project 7 141007894 141022902 - MGP_CBAJ_P0086220 protein_coding nonsense_mediated_decay MGP_CBAJ_T0085119.1 MGP_CBAJ_G0032387.1 mouse_genomes_project 7 115757911 115758902 + MGP_CBAJ_P0085119 Olfr656 protein_coding protein_coding MGP_CBAJ_T0082836.1 MGP_CBAJ_G0031758.1 mouse_genomes_project 7 37571778 37636873 + MGP_CBAJ_P0082836 Rhpn2 protein_coding protein_coding MGP_CBAJ_T0082837.1 MGP_CBAJ_G0031758.1 mouse_genomes_project 7 37571938 37636869 + MGP_CBAJ_P0082837 Rhpn2 protein_coding protein_coding MGP_CBAJ_T0082838.1 MGP_CBAJ_G0031758.1 mouse_genomes_project 7 37623853 37626194 + Rhpn2 protein_coding retained_intron MGP_CBAJ_T0082839.1 MGP_CBAJ_G0031758.1 mouse_genomes_project 7 37627136 37629782 + Rhpn2 protein_coding retained_intron MGP_CBAJ_T0008732.1 MGP_CBAJ_G0007045.1 mouse_genomes_project 7 37245235 37255423 - Gm45096 lincRNA lincRNA MGP_CBAJ_T0085945.1 MGP_CBAJ_G0032643.1 mouse_genomes_project 7 139719501 139941926 - MGP_CBAJ_P0085945 Gsg1l protein_coding protein_coding MGP_CBAJ_T0085042.1 MGP_CBAJ_G0032337.1 mouse_genomes_project 7 114801079 114802030 + MGP_CBAJ_P0085042 protein_coding protein_coding MGP_CBAJ_T0002235.1 MGP_CBAJ_G0002149.1 mouse_genomes_project 7 87205850 87209741 + TEC TEC MGP_CBAJ_T0081058.1 MGP_CBAJ_G0031254.1 mouse_genomes_project 7 3483955 3508438 - MGP_CBAJ_P0081058 Zfp787 protein_coding protein_coding MGP_CBAJ_T0085684.1 MGP_CBAJ_G0032580.1 mouse_genomes_project 7 132524377 132540869 - MGP_CBAJ_P0085684 Gp2 protein_coding protein_coding MGP_CBAJ_T0010737.1 MGP_CBAJ_G0008875.1 mouse_genomes_project 7 32563851 32563911 - Mir7050 miRNA miRNA MGP_CBAJ_T0005086.1 MGP_CBAJ_G0004328.1 mouse_genomes_project 7 25365166 25366737 + 9130221H12Rik antisense antisense MGP_CBAJ_T0005087.1 MGP_CBAJ_G0004328.1 mouse_genomes_project 7 25365202 25366743 + 9130221H12Rik antisense antisense MGP_CBAJ_T0008957.1 MGP_CBAJ_G0007197.1 mouse_genomes_project 7 158429184 158434178 - lincRNA lincRNA MGP_CBAJ_T0008958.1 MGP_CBAJ_G0007197.1 mouse_genomes_project 7 158429213 158431776 - lincRNA lincRNA MGP_CBAJ_T0008959.1 MGP_CBAJ_G0007197.1 mouse_genomes_project 7 158429289 158430194 - lincRNA lincRNA MGP_CBAJ_T0008960.1 MGP_CBAJ_G0007197.1 mouse_genomes_project 7 158429951 158430566 - lincRNA lincRNA MGP_CBAJ_T0008961.1 MGP_CBAJ_G0007197.1 mouse_genomes_project 7 158430162 158431751 - lincRNA lincRNA MGP_CBAJ_T0083653.1 MGP_CBAJ_G0031976.1 mouse_genomes_project 7 56854306 57016904 + MGP_CBAJ_P0083653 Gas2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0083654.1 MGP_CBAJ_G0031976.1 mouse_genomes_project 7 56854718 56979963 + MGP_CBAJ_P0083654 Gas2 protein_coding protein_coding MGP_CBAJ_T0083655.1 MGP_CBAJ_G0031976.1 mouse_genomes_project 7 56856208 56856702 + Gas2 protein_coding retained_intron MGP_CBAJ_T0083656.1 MGP_CBAJ_G0031976.1 mouse_genomes_project 7 56885781 57016384 + MGP_CBAJ_P0083656 Gas2 protein_coding protein_coding MGP_CBAJ_T0083657.1 MGP_CBAJ_G0031976.1 mouse_genomes_project 7 56885863 57016389 + MGP_CBAJ_P0083657 Gas2 protein_coding protein_coding MGP_CBAJ_T0083658.1 MGP_CBAJ_G0031976.1 mouse_genomes_project 7 56887144 56952957 + MGP_CBAJ_P0083658 Gas2 protein_coding protein_coding MGP_CBAJ_T0083659.1 MGP_CBAJ_G0031976.1 mouse_genomes_project 7 56935627 56952995 + Gas2 protein_coding processed_transcript MGP_CBAJ_T0083660.1 MGP_CBAJ_G0031976.1 mouse_genomes_project 7 56952911 56970410 + Gas2 protein_coding processed_transcript MGP_CBAJ_T0080752.1 MGP_CBAJ_G0031179.1 mouse_genomes_project 7 267483 285815 + Prkcg protein_coding processed_transcript MGP_CBAJ_T0080757.1 MGP_CBAJ_G0031179.1 mouse_genomes_project 7 285025 322766 + MGP_CBAJ_P0080757 Prkcg protein_coding protein_coding MGP_CBAJ_T0080758.1 MGP_CBAJ_G0031179.1 mouse_genomes_project 7 285148 322041 + MGP_CBAJ_P0080758 Prkcg protein_coding protein_coding MGP_CBAJ_T0080759.1 MGP_CBAJ_G0031179.1 mouse_genomes_project 7 286817 304948 + MGP_CBAJ_P0080759 Prkcg protein_coding nonsense_mediated_decay MGP_CBAJ_T0080760.1 MGP_CBAJ_G0031179.1 mouse_genomes_project 7 320511 321694 + Prkcg protein_coding retained_intron MGP_CBAJ_T0100752.1 MGP_CBAJ_G0039007.1 mouse_genomes_project 7 109214796 109214918 + Gm23479 snoRNA snoRNA MGP_CBAJ_T0018064.1 MGP_CBAJ_G0015394.1 mouse_genomes_project 7 652749 665271 - Gm15927 processed_transcript antisense MGP_CBAJ_T0018065.1 MGP_CBAJ_G0015394.1 mouse_genomes_project 7 662939 663886 - Gm15927 processed_transcript antisense MGP_CBAJ_T0018066.1 MGP_CBAJ_G0015394.1 mouse_genomes_project 7 662940 665239 - Gm15927 processed_transcript retained_intron MGP_CBAJ_T0018067.1 MGP_CBAJ_G0015394.1 mouse_genomes_project 7 664733 665212 - Gm15927 processed_transcript processed_transcript MGP_CBAJ_T0018068.1 MGP_CBAJ_G0015394.1 mouse_genomes_project 7 664948 665522 - Gm15927 processed_transcript processed_transcript MGP_CBAJ_T0026765.1 MGP_CBAJ_G0017459.1 mouse_genomes_project 10 123038297 123050097 - MGP_CBAJ_P0026765 Glipr1 protein_coding protein_coding MGP_CBAJ_T0026766.1 MGP_CBAJ_G0017459.1 mouse_genomes_project 10 123038304 123056759 - MGP_CBAJ_P0026766 Glipr1 protein_coding protein_coding MGP_CBAJ_T0026767.1 MGP_CBAJ_G0017459.1 mouse_genomes_project 10 123038309 123046328 - MGP_CBAJ_P0026767 Glipr1 protein_coding protein_coding MGP_CBAJ_T0026768.1 MGP_CBAJ_G0017459.1 mouse_genomes_project 10 123046300 123056769 - Glipr1 protein_coding processed_transcript MGP_CBAJ_T0026769.1 MGP_CBAJ_G0017459.1 mouse_genomes_project 10 123046400 123048655 - Glipr1 protein_coding processed_transcript MGP_CBAJ_T0026802.1 MGP_CBAJ_G0017475.1 mouse_genomes_project 10 127703129 127986128 + MGP_CBAJ_P0026802 Ptprr protein_coding protein_coding MGP_CBAJ_T0026803.1 MGP_CBAJ_G0017475.1 mouse_genomes_project 10 127703203 127809624 + Ptprr protein_coding processed_transcript MGP_CBAJ_T0026805.1 MGP_CBAJ_G0017475.1 mouse_genomes_project 10 127839473 127986126 + MGP_CBAJ_P0026805 Ptprr protein_coding protein_coding MGP_CBAJ_T0026806.1 MGP_CBAJ_G0017475.1 mouse_genomes_project 10 127839514 127986133 + MGP_CBAJ_P0026806 Ptprr protein_coding protein_coding MGP_CBAJ_T0026807.1 MGP_CBAJ_G0017475.1 mouse_genomes_project 10 127890607 127936426 + Ptprr protein_coding processed_transcript MGP_CBAJ_T0024955.1 MGP_CBAJ_G0016987.1 mouse_genomes_project 10 62629260 62633742 + MGP_CBAJ_P0024955 Sowahc protein_coding protein_coding MGP_CBAJ_T0099875.1 MGP_CBAJ_G0038130.1 mouse_genomes_project 10 111117354 111117486 + Gm26278 snoRNA snoRNA MGP_CBAJ_T0002941.1 MGP_CBAJ_G0002755.1 mouse_genomes_project 10 12362211 12366902 - Gm28289 antisense antisense MGP_CBAJ_T0025944.1 MGP_CBAJ_G0017234.1 mouse_genomes_project 10 86999489 87008560 + MGP_CBAJ_P0025944 Plk5 protein_coding protein_coding MGP_CBAJ_T0025945.1 MGP_CBAJ_G0017234.1 mouse_genomes_project 10 86999489 87008560 + MGP_CBAJ_P0025945 Plk5 protein_coding protein_coding MGP_CBAJ_T0025946.1 MGP_CBAJ_G0017234.1 mouse_genomes_project 10 87001007 87003598 + Plk5 protein_coding retained_intron MGP_CBAJ_T0025947.1 MGP_CBAJ_G0017234.1 mouse_genomes_project 10 87002340 87003856 + Plk5 protein_coding retained_intron MGP_CBAJ_T0026328.1 MGP_CBAJ_G0017335.1 mouse_genomes_project 10 92841139 92841990 + MGP_CBAJ_P0026328 Gm8394 protein_coding protein_coding MGP_CBAJ_T0012248.1 MGP_CBAJ_G0010360.1 mouse_genomes_project 10 21671036 21673371 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0025645.1 MGP_CBAJ_G0017150.1 mouse_genomes_project 10 84315671 84319614 + Dnmt3l protein_coding processed_transcript MGP_CBAJ_T0025646.1 MGP_CBAJ_G0017150.1 mouse_genomes_project 10 84316011 84354798 + MGP_CBAJ_P0025646 Dnmt3l protein_coding protein_coding MGP_CBAJ_T0025647.1 MGP_CBAJ_G0017150.1 mouse_genomes_project 10 84334358 84354798 + MGP_CBAJ_P0025647 Dnmt3l protein_coding protein_coding MGP_CBAJ_T0025648.1 MGP_CBAJ_G0017150.1 mouse_genomes_project 10 84334475 84354792 + MGP_CBAJ_P0025648 Dnmt3l protein_coding protein_coding MGP_CBAJ_T0025649.1 MGP_CBAJ_G0017150.1 mouse_genomes_project 10 84339351 84342223 + Dnmt3l protein_coding retained_intron MGP_CBAJ_T0025650.1 MGP_CBAJ_G0017150.1 mouse_genomes_project 10 84339851 84354791 + MGP_CBAJ_P0025650 Dnmt3l protein_coding protein_coding MGP_CBAJ_T0025651.1 MGP_CBAJ_G0017150.1 mouse_genomes_project 10 84339851 84354791 + MGP_CBAJ_P0025651 Dnmt3l protein_coding protein_coding MGP_CBAJ_T0025652.1 MGP_CBAJ_G0017150.1 mouse_genomes_project 10 84339851 84354791 + MGP_CBAJ_P0025652 Dnmt3l protein_coding protein_coding MGP_CBAJ_T0024945.1 MGP_CBAJ_G0016981.1 mouse_genomes_project 10 61837923 61922875 + MGP_CBAJ_P0024945 Ccdc138 protein_coding protein_coding MGP_CBAJ_T0097887.1 MGP_CBAJ_G0036160.1 mouse_genomes_project 10 887276 887385 - Gm23023 rRNA rRNA MGP_CBAJ_T0025699.1 MGP_CBAJ_G0017179.1 mouse_genomes_project 10 86048205 86055518 - Plpp2 protein_coding processed_transcript MGP_CBAJ_T0025700.1 MGP_CBAJ_G0017179.1 mouse_genomes_project 10 86048907 86055451 - MGP_CBAJ_P0025700 Plpp2 protein_coding protein_coding MGP_CBAJ_T0025701.1 MGP_CBAJ_G0017179.1 mouse_genomes_project 10 86049262 86055548 - MGP_CBAJ_P0025701 Plpp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0003032.1 MGP_CBAJ_G0002823.1 mouse_genomes_project 10 133563674 133566313 + Gm4473 antisense antisense MGP_CBAJ_T0024703.1 MGP_CBAJ_G0016903.1 mouse_genomes_project 10 42781248 42783545 - MGP_CBAJ_P0024703 Gpr6 protein_coding protein_coding MGP_CBAJ_T0006011.1 MGP_CBAJ_G0005026.1 mouse_genomes_project 10 67608236 67630783 + lincRNA lincRNA MGP_CBAJ_T0011145.1 MGP_CBAJ_G0009283.1 mouse_genomes_project 10 44395938 44396262 - Gm25277 misc_RNA misc_RNA MGP_CBAJ_T0027192.1 MGP_CBAJ_G0017599.1 mouse_genomes_project 10 142276544 142283008 - MGP_CBAJ_P0027192 Myl6 protein_coding protein_coding MGP_CBAJ_T0025334.1 MGP_CBAJ_G0017074.1 mouse_genomes_project 10 76249438 76523630 - MGP_CBAJ_P0025334 Bicc1 protein_coding protein_coding MGP_CBAJ_T0025335.1 MGP_CBAJ_G0017074.1 mouse_genomes_project 10 76251692 76508579 - MGP_CBAJ_P0025335 Bicc1 protein_coding protein_coding MGP_CBAJ_T0025336.1 MGP_CBAJ_G0017074.1 mouse_genomes_project 10 76251692 76523620 - MGP_CBAJ_P0025336 Bicc1 protein_coding protein_coding MGP_CBAJ_T0025337.1 MGP_CBAJ_G0017074.1 mouse_genomes_project 10 76260673 76274651 - Bicc1 protein_coding retained_intron MGP_CBAJ_T0025680.1 MGP_CBAJ_G0017166.1 mouse_genomes_project 10 85237915 85238878 - MGP_CBAJ_P0025680 Olfr1356 protein_coding protein_coding MGP_CBAJ_T0025681.1 MGP_CBAJ_G0017166.1 mouse_genomes_project 10 85237915 85243131 - MGP_CBAJ_P0025681 Olfr1356 protein_coding protein_coding MGP_CBAJ_T0025173.1 MGP_CBAJ_G0017042.1 mouse_genomes_project 10 67162963 67173034 + Rufy2 protein_coding retained_intron MGP_CBAJ_T0025174.1 MGP_CBAJ_G0017042.1 mouse_genomes_project 10 67162979 67188955 + MGP_CBAJ_P0025174 Rufy2 protein_coding protein_coding MGP_CBAJ_T0025175.1 MGP_CBAJ_G0017042.1 mouse_genomes_project 10 67162982 67198387 + MGP_CBAJ_P0025175 Rufy2 protein_coding protein_coding MGP_CBAJ_T0025176.1 MGP_CBAJ_G0017042.1 mouse_genomes_project 10 67162992 67201642 + MGP_CBAJ_P0025176 Rufy2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025177.1 MGP_CBAJ_G0017042.1 mouse_genomes_project 10 67163002 67188928 + MGP_CBAJ_P0025177 Rufy2 protein_coding protein_coding MGP_CBAJ_T0025178.1 MGP_CBAJ_G0017042.1 mouse_genomes_project 10 67163033 67186708 + MGP_CBAJ_P0025178 Rufy2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025179.1 MGP_CBAJ_G0017042.1 mouse_genomes_project 10 67164168 67171911 + MGP_CBAJ_P0025179 Rufy2 protein_coding protein_coding MGP_CBAJ_T0025180.1 MGP_CBAJ_G0017042.1 mouse_genomes_project 10 67186745 67192608 + Rufy2 protein_coding retained_intron MGP_CBAJ_T0000309.1 MGP_CBAJ_G0000254.1 mouse_genomes_project 10 92530930 92530998 + mt-Tp Mt_tRNA Mt_tRNA MGP_CBAJ_T0027134.1 MGP_CBAJ_G0017580.1 mouse_genomes_project 10 141779495 141822360 + MGP_CBAJ_P0027134 Baz2a protein_coding protein_coding MGP_CBAJ_T0027135.1 MGP_CBAJ_G0017580.1 mouse_genomes_project 10 141779495 141822360 + MGP_CBAJ_P0027135 Baz2a protein_coding protein_coding MGP_CBAJ_T0027150.1 MGP_CBAJ_G0017585.1 mouse_genomes_project 10 141951188 141973110 + Timeless protein_coding retained_intron MGP_CBAJ_T0027151.1 MGP_CBAJ_G0017585.1 mouse_genomes_project 10 141951197 141973030 + MGP_CBAJ_P0027151 Timeless protein_coding protein_coding MGP_CBAJ_T0027152.1 MGP_CBAJ_G0017585.1 mouse_genomes_project 10 141951199 141966285 + MGP_CBAJ_P0027152 Timeless protein_coding protein_coding MGP_CBAJ_T0027153.1 MGP_CBAJ_G0017585.1 mouse_genomes_project 10 141951223 141961499 + MGP_CBAJ_P0027153 Timeless protein_coding protein_coding MGP_CBAJ_T0027154.1 MGP_CBAJ_G0017585.1 mouse_genomes_project 10 141951242 141973119 + MGP_CBAJ_P0027154 Timeless protein_coding protein_coding MGP_CBAJ_T0027155.1 MGP_CBAJ_G0017585.1 mouse_genomes_project 10 141959724 141972886 + MGP_CBAJ_P0027155 Timeless protein_coding unknown_likely_coding MGP_CBAJ_T0027156.1 MGP_CBAJ_G0017585.1 mouse_genomes_project 10 141960224 141961439 + Timeless protein_coding retained_intron MGP_CBAJ_T0027157.1 MGP_CBAJ_G0017585.1 mouse_genomes_project 10 141962157 141962829 + Timeless protein_coding retained_intron MGP_CBAJ_T0027158.1 MGP_CBAJ_G0017585.1 mouse_genomes_project 10 141962447 141963513 + Timeless protein_coding retained_intron MGP_CBAJ_T0027159.1 MGP_CBAJ_G0017585.1 mouse_genomes_project 10 141967455 141968223 + Timeless protein_coding retained_intron MGP_CBAJ_T0027160.1 MGP_CBAJ_G0017585.1 mouse_genomes_project 10 141967510 141973117 + Timeless protein_coding processed_transcript MGP_CBAJ_T0027161.1 MGP_CBAJ_G0017585.1 mouse_genomes_project 10 141969388 141970036 + Timeless protein_coding retained_intron MGP_CBAJ_T0027162.1 MGP_CBAJ_G0017585.1 mouse_genomes_project 10 141969794 141970548 + Timeless protein_coding retained_intron MGP_CBAJ_T0025193.1 MGP_CBAJ_G0017046.1 mouse_genomes_project 10 67345608 67441955 - MGP_CBAJ_P0025193 Mypn protein_coding protein_coding MGP_CBAJ_T0025482.1 MGP_CBAJ_G0017103.1 mouse_genomes_project 10 81863408 81887915 - MGP_CBAJ_P0025482 Smarcb1 protein_coding protein_coding MGP_CBAJ_T0025483.1 MGP_CBAJ_G0017103.1 mouse_genomes_project 10 81863412 81880472 - Smarcb1 protein_coding retained_intron MGP_CBAJ_T0025484.1 MGP_CBAJ_G0017103.1 mouse_genomes_project 10 81863414 81882870 - Smarcb1 protein_coding retained_intron MGP_CBAJ_T0025485.1 MGP_CBAJ_G0017103.1 mouse_genomes_project 10 81863416 81887912 - MGP_CBAJ_P0025485 Smarcb1 protein_coding protein_coding MGP_CBAJ_T0025486.1 MGP_CBAJ_G0017103.1 mouse_genomes_project 10 81864167 81887887 - MGP_CBAJ_P0025486 Smarcb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025487.1 MGP_CBAJ_G0017103.1 mouse_genomes_project 10 81876581 81881462 - MGP_CBAJ_P0025487 Smarcb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027269.1 MGP_CBAJ_G0017635.1 mouse_genomes_project 10 143269047 143270072 + MGP_CBAJ_P0027269 Olfr780 protein_coding protein_coding MGP_CBAJ_T0002990.1 MGP_CBAJ_G0002795.1 mouse_genomes_project 10 88003310 88007141 + Atcayos antisense antisense MGP_CBAJ_T0002991.1 MGP_CBAJ_G0002795.1 mouse_genomes_project 10 88003384 88021158 + Atcayos antisense antisense MGP_CBAJ_T0002992.1 MGP_CBAJ_G0002795.1 mouse_genomes_project 10 88003392 88023199 + Atcayos antisense antisense MGP_CBAJ_T0025613.1 MGP_CBAJ_G0017142.1 mouse_genomes_project 10 84031792 84032554 - MGP_CBAJ_P0025613 protein_coding protein_coding MGP_CBAJ_T0026317.1 MGP_CBAJ_G0017329.1 mouse_genomes_project 10 92249387 92410180 + MGP_CBAJ_P0026317 Rfx4 protein_coding protein_coding MGP_CBAJ_T0026318.1 MGP_CBAJ_G0017329.1 mouse_genomes_project 10 92257827 92317842 + Rfx4 protein_coding processed_transcript MGP_CBAJ_T0026319.1 MGP_CBAJ_G0017329.1 mouse_genomes_project 10 92257827 92317842 + Rfx4 protein_coding processed_transcript MGP_CBAJ_T0026320.1 MGP_CBAJ_G0017329.1 mouse_genomes_project 10 92342898 92376591 + Rfx4 protein_coding processed_transcript MGP_CBAJ_T0026321.1 MGP_CBAJ_G0017329.1 mouse_genomes_project 10 92342898 92410326 + MGP_CBAJ_P0026321 Rfx4 protein_coding protein_coding MGP_CBAJ_T0000802.1 MGP_CBAJ_G0000738.1 mouse_genomes_project 10 133273742 133277440 - TEC TEC MGP_CBAJ_T0026085.1 MGP_CBAJ_G0017277.1 mouse_genomes_project 10 88006871 88010739 - MGP_CBAJ_P0026085 Nmrk2 protein_coding protein_coding MGP_CBAJ_T0097747.1 MGP_CBAJ_G0036020.1 mouse_genomes_project 10 62629260 62633739 + pseudogene pseudogene MGP_CBAJ_T0027164.1 MGP_CBAJ_G0017587.1 mouse_genomes_project 10 141995200 141997355 + MGP_CBAJ_P0027164 Apof protein_coding protein_coding MGP_CBAJ_T0025480.1 MGP_CBAJ_G0017101.1 mouse_genomes_project 10 81815082 81816082 - MGP_CBAJ_P0025480 Mif protein_coding protein_coding MGP_CBAJ_T0024447.1 MGP_CBAJ_G0016798.1 mouse_genomes_project 10 21402448 21448366 - MGP_CBAJ_P0024447 E030030I06Rik protein_coding protein_coding MGP_CBAJ_T0024448.1 MGP_CBAJ_G0016798.1 mouse_genomes_project 10 21416537 21447706 - E030030I06Rik protein_coding processed_transcript MGP_CBAJ_T0024449.1 MGP_CBAJ_G0016798.1 mouse_genomes_project 10 21443518 21447920 - E030030I06Rik protein_coding processed_transcript MGP_CBAJ_T0024450.1 MGP_CBAJ_G0016798.1 mouse_genomes_project 10 21443605 21448366 - MGP_CBAJ_P0024450 E030030I06Rik protein_coding protein_coding MGP_CBAJ_T0024451.1 MGP_CBAJ_G0016798.1 mouse_genomes_project 10 21447584 21447793 - E030030I06Rik protein_coding transcribed_unprocessed_pseudogene MGP_CBAJ_T0027125.1 MGP_CBAJ_G0017579.1 mouse_genomes_project 10 141753970 141777104 + MGP_CBAJ_P0027125 Atp5b protein_coding protein_coding MGP_CBAJ_T0027126.1 MGP_CBAJ_G0017579.1 mouse_genomes_project 10 141754003 141754784 + Atp5b protein_coding processed_transcript MGP_CBAJ_T0027127.1 MGP_CBAJ_G0017579.1 mouse_genomes_project 10 141755130 141756647 + Atp5b protein_coding retained_intron MGP_CBAJ_T0027128.1 MGP_CBAJ_G0017579.1 mouse_genomes_project 10 141756443 141776873 + Atp5b protein_coding retained_intron MGP_CBAJ_T0027129.1 MGP_CBAJ_G0017579.1 mouse_genomes_project 10 141756927 141775865 + Atp5b protein_coding processed_transcript MGP_CBAJ_T0027130.1 MGP_CBAJ_G0017579.1 mouse_genomes_project 10 141774393 141775764 + Atp5b protein_coding retained_intron MGP_CBAJ_T0027131.1 MGP_CBAJ_G0017579.1 mouse_genomes_project 10 141775203 141776394 + Atp5b protein_coding retained_intron MGP_CBAJ_T0027132.1 MGP_CBAJ_G0017579.1 mouse_genomes_project 10 141775264 141776986 + Atp5b protein_coding processed_transcript MGP_CBAJ_T0027133.1 MGP_CBAJ_G0017579.1 mouse_genomes_project 10 141775753 141776985 + Atp5b protein_coding processed_transcript MGP_CBAJ_T0012278.1 MGP_CBAJ_G0010390.1 mouse_genomes_project 10 79376338 79376887 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0025424.1 MGP_CBAJ_G0017088.1 mouse_genomes_project 10 81306673 81353129 + MGP_CBAJ_P0025424 Upb1 protein_coding protein_coding MGP_CBAJ_T0025425.1 MGP_CBAJ_G0017088.1 mouse_genomes_project 10 81306720 81331629 + Upb1 protein_coding retained_intron MGP_CBAJ_T0025426.1 MGP_CBAJ_G0017088.1 mouse_genomes_project 10 81315017 81336662 + Upb1 protein_coding retained_intron MGP_CBAJ_T0025428.1 MGP_CBAJ_G0017088.1 mouse_genomes_project 10 81337065 81339204 + Upb1 protein_coding retained_intron MGP_CBAJ_T0024475.1 MGP_CBAJ_G0016809.1 mouse_genomes_project 10 23507090 23508204 + MGP_CBAJ_P0024475 Taar1 protein_coding protein_coding MGP_CBAJ_T0026570.1 MGP_CBAJ_G0017392.1 mouse_genomes_project 10 102521584 102554784 - MGP_CBAJ_P0026570 Metap2 protein_coding protein_coding MGP_CBAJ_T0026571.1 MGP_CBAJ_G0017392.1 mouse_genomes_project 10 102522922 102527369 - Metap2 protein_coding retained_intron MGP_CBAJ_T0026572.1 MGP_CBAJ_G0017392.1 mouse_genomes_project 10 102524022 102556176 - MGP_CBAJ_P0026572 Metap2 protein_coding protein_coding MGP_CBAJ_T0026573.1 MGP_CBAJ_G0017392.1 mouse_genomes_project 10 102524023 102554745 - MGP_CBAJ_P0026573 Metap2 protein_coding protein_coding MGP_CBAJ_T0026574.1 MGP_CBAJ_G0017392.1 mouse_genomes_project 10 102524023 102554754 - MGP_CBAJ_P0026574 Metap2 protein_coding protein_coding MGP_CBAJ_T0026575.1 MGP_CBAJ_G0017392.1 mouse_genomes_project 10 102524675 102534954 - MGP_CBAJ_P0026575 Metap2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026576.1 MGP_CBAJ_G0017392.1 mouse_genomes_project 10 102525413 102527304 - Metap2 protein_coding retained_intron MGP_CBAJ_T0026577.1 MGP_CBAJ_G0017392.1 mouse_genomes_project 10 102525413 102528831 - MGP_CBAJ_P0026577 Metap2 protein_coding protein_coding MGP_CBAJ_T0026578.1 MGP_CBAJ_G0017392.1 mouse_genomes_project 10 102532137 102534812 - Metap2 protein_coding retained_intron MGP_CBAJ_T0026579.1 MGP_CBAJ_G0017392.1 mouse_genomes_project 10 102532234 102554586 - MGP_CBAJ_P0026579 Metap2 protein_coding protein_coding MGP_CBAJ_T0026580.1 MGP_CBAJ_G0017392.1 mouse_genomes_project 10 102533491 102554784 - MGP_CBAJ_P0026580 Metap2 protein_coding protein_coding MGP_CBAJ_T0026581.1 MGP_CBAJ_G0017392.1 mouse_genomes_project 10 102542806 102554698 - Metap2 protein_coding retained_intron MGP_CBAJ_T0026582.1 MGP_CBAJ_G0017392.1 mouse_genomes_project 10 102542885 102554731 - Metap2 protein_coding retained_intron MGP_CBAJ_T0026583.1 MGP_CBAJ_G0017392.1 mouse_genomes_project 10 102554660 102555268 - Metap2 protein_coding processed_transcript MGP_CBAJ_T0026584.1 MGP_CBAJ_G0017392.1 mouse_genomes_project 10 102554897 102556103 - Metap2 protein_coding processed_transcript MGP_CBAJ_T0026585.1 MGP_CBAJ_G0017392.1 mouse_genomes_project 10 102555014 102564561 - Metap2 protein_coding processed_transcript MGP_CBAJ_T0025541.1 MGP_CBAJ_G0017123.1 mouse_genomes_project 10 82859635 83064559 - MGP_CBAJ_P0025541 Pcbp3 protein_coding protein_coding MGP_CBAJ_T0025542.1 MGP_CBAJ_G0017123.1 mouse_genomes_project 10 82859636 82923294 - Pcbp3 protein_coding processed_transcript MGP_CBAJ_T0025543.1 MGP_CBAJ_G0017123.1 mouse_genomes_project 10 82859636 82926366 - MGP_CBAJ_P0025543 Pcbp3 protein_coding protein_coding MGP_CBAJ_T0025544.1 MGP_CBAJ_G0017123.1 mouse_genomes_project 10 82859638 83064658 - MGP_CBAJ_P0025544 Pcbp3 protein_coding protein_coding MGP_CBAJ_T0025545.1 MGP_CBAJ_G0017123.1 mouse_genomes_project 10 82860010 82895638 - Pcbp3 protein_coding processed_transcript MGP_CBAJ_T0025546.1 MGP_CBAJ_G0017123.1 mouse_genomes_project 10 82860148 82886196 - MGP_CBAJ_P0025546 Pcbp3 protein_coding protein_coding MGP_CBAJ_T0025547.1 MGP_CBAJ_G0017123.1 mouse_genomes_project 10 82861083 82917208 - MGP_CBAJ_P0025547 Pcbp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025548.1 MGP_CBAJ_G0017123.1 mouse_genomes_project 10 82887576 83010290 - Pcbp3 protein_coding processed_transcript MGP_CBAJ_T0025549.1 MGP_CBAJ_G0017123.1 mouse_genomes_project 10 82895621 82919904 - Pcbp3 protein_coding processed_transcript MGP_CBAJ_T0027272.1 MGP_CBAJ_G0017637.1 mouse_genomes_project 10 143347411 143355617 + MGP_CBAJ_P0027272 Olfr784 protein_coding protein_coding MGP_CBAJ_T0000797.1 MGP_CBAJ_G0000733.1 mouse_genomes_project 10 125464559 125465163 + TEC TEC MGP_CBAJ_T0026666.1 MGP_CBAJ_G0017427.1 mouse_genomes_project 10 109961882 110008078 - MGP_CBAJ_P0026666 Tmtc3 protein_coding protein_coding MGP_CBAJ_T0026667.1 MGP_CBAJ_G0017427.1 mouse_genomes_project 10 109996106 110008067 - Tmtc3 protein_coding retained_intron MGP_CBAJ_T0026668.1 MGP_CBAJ_G0017427.1 mouse_genomes_project 10 109997329 110007995 - MGP_CBAJ_P0026668 Tmtc3 protein_coding protein_coding MGP_CBAJ_T0026669.1 MGP_CBAJ_G0017427.1 mouse_genomes_project 10 109999526 110008054 - MGP_CBAJ_P0026669 Tmtc3 protein_coding protein_coding MGP_CBAJ_T0009465.1 MGP_CBAJ_G0007603.1 mouse_genomes_project 10 63678113 63678171 + Mir6906 miRNA miRNA MGP_CBAJ_T0024865.1 MGP_CBAJ_G0016953.1 mouse_genomes_project 10 55066672 55218693 - MGP_CBAJ_P0024865 Ros1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024866.1 MGP_CBAJ_G0016953.1 mouse_genomes_project 10 55066877 55218981 - MGP_CBAJ_P0024866 Ros1 protein_coding protein_coding MGP_CBAJ_T0024867.1 MGP_CBAJ_G0016953.1 mouse_genomes_project 10 55066967 55218693 - MGP_CBAJ_P0024867 Ros1 protein_coding protein_coding MGP_CBAJ_T0024868.1 MGP_CBAJ_G0016953.1 mouse_genomes_project 10 55066967 55218693 - MGP_CBAJ_P0024868 Ros1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025400.1 MGP_CBAJ_G0017081.1 mouse_genomes_project 10 80807468 80884876 - MGP_CBAJ_P0025400 Rsph14 protein_coding protein_coding MGP_CBAJ_T0025401.1 MGP_CBAJ_G0017081.1 mouse_genomes_project 10 80807468 80884855 - MGP_CBAJ_P0025401 Rsph14 protein_coding protein_coding MGP_CBAJ_T0025402.1 MGP_CBAJ_G0017081.1 mouse_genomes_project 10 80807468 80884843 - MGP_CBAJ_P0025402 Rsph14 protein_coding protein_coding MGP_CBAJ_T0025403.1 MGP_CBAJ_G0017081.1 mouse_genomes_project 10 80809662 80884843 - MGP_CBAJ_P0025403 Rsph14 protein_coding protein_coding MGP_CBAJ_T0025404.1 MGP_CBAJ_G0017081.1 mouse_genomes_project 10 80811660 80884852 - MGP_CBAJ_P0025404 Rsph14 protein_coding protein_coding MGP_CBAJ_T0025408.1 MGP_CBAJ_G0017081.1 mouse_genomes_project 10 80874601 80884818 - MGP_CBAJ_P0025408 Rsph14 protein_coding protein_coding MGP_CBAJ_T0025409.1 MGP_CBAJ_G0017081.1 mouse_genomes_project 10 80876808 80884876 - Rsph14 protein_coding retained_intron MGP_CBAJ_T0016873.1 MGP_CBAJ_G0014878.1 mouse_genomes_project 10 94406366 94407343 - Gm15344 processed_transcript processed_transcript MGP_CBAJ_T0006063.1 MGP_CBAJ_G0005056.1 mouse_genomes_project 10 116729715 116733526 - C230021G24Rik lincRNA lincRNA MGP_CBAJ_T0024928.1 MGP_CBAJ_G0016976.1 mouse_genomes_project 10 61537876 61539642 - MGP_CBAJ_P0024928 Gm4981 protein_coding protein_coding MGP_CBAJ_T0024412.1 MGP_CBAJ_G0016788.1 mouse_genomes_project 10 19379882 19396132 + MGP_CBAJ_P0024412 Mtfr2 protein_coding protein_coding MGP_CBAJ_T0027002.1 MGP_CBAJ_G0017537.1 mouse_genomes_project 10 140491144 140494092 - MGP_CBAJ_P0027002 Tspan31 protein_coding protein_coding MGP_CBAJ_T0005978.1 MGP_CBAJ_G0004998.1 mouse_genomes_project 10 239946 243009 - Gm26752 lincRNA lincRNA MGP_CBAJ_T0025200.1 MGP_CBAJ_G0017049.1 mouse_genomes_project 10 67656220 67675686 + Dnajc12 protein_coding retained_intron MGP_CBAJ_T0025201.1 MGP_CBAJ_G0017049.1 mouse_genomes_project 10 67656347 67675690 + MGP_CBAJ_P0025201 Dnajc12 protein_coding protein_coding MGP_CBAJ_T0024744.1 MGP_CBAJ_G0016912.1 mouse_genomes_project 10 43393173 43416984 - MGP_CBAJ_P0024744 protein_coding protein_coding MGP_CBAJ_T0016872.1 MGP_CBAJ_G0014877.1 mouse_genomes_project 10 86407901 86411477 - E130317F20Rik processed_transcript processed_transcript MGP_CBAJ_T0012305.1 MGP_CBAJ_G0010417.1 mouse_genomes_project 10 144273767 144309918 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005995.1 MGP_CBAJ_G0005010.1 mouse_genomes_project 10 20986099 20989239 + Gm29323 lincRNA lincRNA MGP_CBAJ_T0024476.1 MGP_CBAJ_G0016810.1 mouse_genomes_project 10 23527116 23530128 + MGP_CBAJ_P0024476 Taar2 protein_coding protein_coding MGP_CBAJ_T0025498.1 MGP_CBAJ_G0017108.1 mouse_genomes_project 10 82022132 82035379 + MGP_CBAJ_P0025498 Zfp280b protein_coding protein_coding MGP_CBAJ_T0025064.1 MGP_CBAJ_G0017013.1 mouse_genomes_project 10 65295243 65323536 - MGP_CBAJ_P0025064 Eif4ebp2 protein_coding protein_coding MGP_CBAJ_T0025932.1 MGP_CBAJ_G0017232.1 mouse_genomes_project 10 86966983 86973472 + MGP_CBAJ_P0025932 Reep6 protein_coding protein_coding MGP_CBAJ_T0025933.1 MGP_CBAJ_G0017232.1 mouse_genomes_project 10 86966983 86973472 + MGP_CBAJ_P0025933 Reep6 protein_coding protein_coding MGP_CBAJ_T0025934.1 MGP_CBAJ_G0017232.1 mouse_genomes_project 10 86967175 86973471 + MGP_CBAJ_P0025934 Reep6 protein_coding protein_coding MGP_CBAJ_T0025935.1 MGP_CBAJ_G0017232.1 mouse_genomes_project 10 86967228 86971463 + Reep6 protein_coding retained_intron MGP_CBAJ_T0025936.1 MGP_CBAJ_G0017232.1 mouse_genomes_project 10 86967232 86972613 + MGP_CBAJ_P0025936 Reep6 protein_coding protein_coding MGP_CBAJ_T0027234.1 MGP_CBAJ_G0017617.1 mouse_genomes_project 10 142672906 142677061 - MGP_CBAJ_P0027234 Ormdl2 protein_coding protein_coding MGP_CBAJ_T0024109.1 MGP_CBAJ_G0016714.1 mouse_genomes_project 10 1731820 2047970 + Esr1 protein_coding processed_transcript MGP_CBAJ_T0024110.1 MGP_CBAJ_G0016714.1 mouse_genomes_project 10 1732216 2167974 + MGP_CBAJ_P0024110 Esr1 protein_coding protein_coding MGP_CBAJ_T0024111.1 MGP_CBAJ_G0016714.1 mouse_genomes_project 10 1732223 1805820 + Esr1 protein_coding retained_intron MGP_CBAJ_T0024112.1 MGP_CBAJ_G0016714.1 mouse_genomes_project 10 1732240 1999195 + Esr1 protein_coding retained_intron MGP_CBAJ_T0024113.1 MGP_CBAJ_G0016714.1 mouse_genomes_project 10 1732248 2166122 + MGP_CBAJ_P0024113 Esr1 protein_coding protein_coding MGP_CBAJ_T0024114.1 MGP_CBAJ_G0016714.1 mouse_genomes_project 10 1845910 2164390 + MGP_CBAJ_P0024114 Esr1 protein_coding protein_coding MGP_CBAJ_T0024115.1 MGP_CBAJ_G0016714.1 mouse_genomes_project 10 1845910 2122438 + MGP_CBAJ_P0024115 Esr1 protein_coding protein_coding MGP_CBAJ_T0024116.1 MGP_CBAJ_G0016714.1 mouse_genomes_project 10 1848408 1921794 + Esr1 protein_coding processed_transcript MGP_CBAJ_T0024117.1 MGP_CBAJ_G0016714.1 mouse_genomes_project 10 2072854 2160296 + Esr1 protein_coding processed_transcript MGP_CBAJ_T0024118.1 MGP_CBAJ_G0016714.1 mouse_genomes_project 10 2093526 2164022 + Esr1 protein_coding processed_transcript MGP_CBAJ_T0098154.1 MGP_CBAJ_G0036427.1 mouse_genomes_project 10 29248672 29248826 - Gm22811 ribozyme ribozyme MGP_CBAJ_T0012276.1 MGP_CBAJ_G0010388.1 mouse_genomes_project 10 77432791 77433596 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0026812.1 MGP_CBAJ_G0017479.1 mouse_genomes_project 10 128239165 128345220 - MGP_CBAJ_P0026812 Cnot2 protein_coding protein_coding MGP_CBAJ_T0026813.1 MGP_CBAJ_G0017479.1 mouse_genomes_project 10 128239169 128345205 - MGP_CBAJ_P0026813 Cnot2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026814.1 MGP_CBAJ_G0017479.1 mouse_genomes_project 10 128239169 128307765 - MGP_CBAJ_P0026814 Cnot2 protein_coding protein_coding MGP_CBAJ_T0026815.1 MGP_CBAJ_G0017479.1 mouse_genomes_project 10 128239170 128345209 - MGP_CBAJ_P0026815 Cnot2 protein_coding protein_coding MGP_CBAJ_T0026816.1 MGP_CBAJ_G0017479.1 mouse_genomes_project 10 128239791 128345220 - MGP_CBAJ_P0026816 Cnot2 protein_coding protein_coding MGP_CBAJ_T0026817.1 MGP_CBAJ_G0017479.1 mouse_genomes_project 10 128240201 128345211 - MGP_CBAJ_P0026817 Cnot2 protein_coding protein_coding MGP_CBAJ_T0026818.1 MGP_CBAJ_G0017479.1 mouse_genomes_project 10 128240204 128295847 - MGP_CBAJ_P0026818 Cnot2 protein_coding protein_coding MGP_CBAJ_T0026819.1 MGP_CBAJ_G0017479.1 mouse_genomes_project 10 128253852 128345192 - Cnot2 protein_coding processed_transcript MGP_CBAJ_T0026820.1 MGP_CBAJ_G0017479.1 mouse_genomes_project 10 128254102 128345202 - Cnot2 protein_coding processed_transcript MGP_CBAJ_T0026821.1 MGP_CBAJ_G0017479.1 mouse_genomes_project 10 128255133 128345199 - Cnot2 protein_coding processed_transcript MGP_CBAJ_T0026822.1 MGP_CBAJ_G0017479.1 mouse_genomes_project 10 128255138 128345194 - Cnot2 protein_coding processed_transcript MGP_CBAJ_T0026823.1 MGP_CBAJ_G0017479.1 mouse_genomes_project 10 128261183 128345174 - MGP_CBAJ_P0026823 Cnot2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026824.1 MGP_CBAJ_G0017479.1 mouse_genomes_project 10 128263524 128345200 - Cnot2 protein_coding processed_transcript MGP_CBAJ_T0026825.1 MGP_CBAJ_G0017479.1 mouse_genomes_project 10 128269064 128345205 - Cnot2 protein_coding processed_transcript MGP_CBAJ_T0026826.1 MGP_CBAJ_G0017479.1 mouse_genomes_project 10 128269064 128345220 - MGP_CBAJ_P0026826 Cnot2 protein_coding protein_coding MGP_CBAJ_T0026827.1 MGP_CBAJ_G0017479.1 mouse_genomes_project 10 128269443 128345192 - Cnot2 protein_coding processed_transcript MGP_CBAJ_T0016843.1 MGP_CBAJ_G0014871.1 mouse_genomes_project 10 24268675 24269568 - Gm15270 processed_transcript processed_transcript MGP_CBAJ_T0016844.1 MGP_CBAJ_G0014871.1 mouse_genomes_project 10 24268681 24316346 - Gm15270 processed_transcript processed_transcript MGP_CBAJ_T0016845.1 MGP_CBAJ_G0014871.1 mouse_genomes_project 10 24300649 24314286 - Gm15270 processed_transcript processed_transcript MGP_CBAJ_T0016846.1 MGP_CBAJ_G0014871.1 mouse_genomes_project 10 24315777 24317637 - Gm15270 processed_transcript processed_transcript MGP_CBAJ_T0025342.1 MGP_CBAJ_G0017076.1 mouse_genomes_project 10 76649654 76686111 - MGP_CBAJ_P0025342 Ube2d1 protein_coding protein_coding MGP_CBAJ_T0025343.1 MGP_CBAJ_G0017076.1 mouse_genomes_project 10 76650333 76653858 - Ube2d1 protein_coding retained_intron MGP_CBAJ_T0025344.1 MGP_CBAJ_G0017076.1 mouse_genomes_project 10 76654674 76686067 - Ube2d1 protein_coding retained_intron MGP_CBAJ_T0099863.1 MGP_CBAJ_G0038118.1 mouse_genomes_project 10 71190503 71190633 + Gm22594 snoRNA snoRNA MGP_CBAJ_T0012304.1 MGP_CBAJ_G0010416.1 mouse_genomes_project 10 144214901 144215872 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012283.1 MGP_CBAJ_G0010395.1 mouse_genomes_project 10 87704375 87704632 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0024491.1 MGP_CBAJ_G0016825.1 mouse_genomes_project 10 23905207 23986655 + MGP_CBAJ_P0024491 Moxd1 protein_coding protein_coding MGP_CBAJ_T0024492.1 MGP_CBAJ_G0016825.1 mouse_genomes_project 10 23905235 23913993 + Moxd1 protein_coding processed_transcript MGP_CBAJ_T0012274.1 MGP_CBAJ_G0010386.1 mouse_genomes_project 10 67114294 67114920 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099853.1 MGP_CBAJ_G0038108.1 mouse_genomes_project 10 42941859 42941991 + Gm25526 snoRNA snoRNA MGP_CBAJ_T0098153.1 MGP_CBAJ_G0036426.1 mouse_genomes_project 10 2197989 2198271 - Gm25694 ribozyme ribozyme MGP_CBAJ_T0011156.1 MGP_CBAJ_G0009294.1 mouse_genomes_project 10 100543142 100543268 - Gm27582 misc_RNA misc_RNA MGP_CBAJ_T0027266.1 MGP_CBAJ_G0017633.1 mouse_genomes_project 10 143205274 143207722 + MGP_CBAJ_P0027266 Olfr776 protein_coding protein_coding MGP_CBAJ_T0027270.1 MGP_CBAJ_G0017636.1 mouse_genomes_project 10 143276466 143281323 + MGP_CBAJ_P0027270 Olfr781 protein_coding protein_coding MGP_CBAJ_T0027271.1 MGP_CBAJ_G0017636.1 mouse_genomes_project 10 143280387 143281323 + MGP_CBAJ_P0027271 Olfr781 protein_coding protein_coding MGP_CBAJ_T0025225.1 MGP_CBAJ_G0017056.1 mouse_genomes_project 10 72087696 72106282 - MGP_CBAJ_P0025225 Nrbf2 protein_coding protein_coding MGP_CBAJ_T0025226.1 MGP_CBAJ_G0017056.1 mouse_genomes_project 10 72088847 72106157 - MGP_CBAJ_P0025226 Nrbf2 protein_coding protein_coding MGP_CBAJ_T0026537.1 MGP_CBAJ_G0017381.1 mouse_genomes_project 10 101274893 101612062 - MGP_CBAJ_P0026537 Cfap54 protein_coding protein_coding MGP_CBAJ_T0026538.1 MGP_CBAJ_G0017381.1 mouse_genomes_project 10 101297508 101336951 - MGP_CBAJ_P0026538 Cfap54 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026539.1 MGP_CBAJ_G0017381.1 mouse_genomes_project 10 101408303 101449864 - Cfap54 protein_coding processed_transcript MGP_CBAJ_T0026540.1 MGP_CBAJ_G0017381.1 mouse_genomes_project 10 101420203 101569246 - MGP_CBAJ_P0026540 Cfap54 protein_coding unknown_likely_coding MGP_CBAJ_T0026541.1 MGP_CBAJ_G0017381.1 mouse_genomes_project 10 101420203 101612040 - MGP_CBAJ_P0026541 Cfap54 protein_coding unknown_likely_coding MGP_CBAJ_T0026542.1 MGP_CBAJ_G0017381.1 mouse_genomes_project 10 101424730 101449872 - MGP_CBAJ_P0026542 Cfap54 protein_coding protein_coding MGP_CBAJ_T0026543.1 MGP_CBAJ_G0017381.1 mouse_genomes_project 10 101489351 101564776 - MGP_CBAJ_P0026543 Cfap54 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026544.1 MGP_CBAJ_G0017381.1 mouse_genomes_project 10 101549251 101552634 - Cfap54 protein_coding processed_transcript MGP_CBAJ_T0026545.1 MGP_CBAJ_G0017381.1 mouse_genomes_project 10 101558403 101612062 - MGP_CBAJ_P0026545 Cfap54 protein_coding protein_coding MGP_CBAJ_T0026546.1 MGP_CBAJ_G0017381.1 mouse_genomes_project 10 101565371 101612040 - MGP_CBAJ_P0026546 Cfap54 protein_coding protein_coding MGP_CBAJ_T0026547.1 MGP_CBAJ_G0017381.1 mouse_genomes_project 10 101589543 101612062 - Cfap54 protein_coding retained_intron MGP_CBAJ_T0026548.1 MGP_CBAJ_G0017381.1 mouse_genomes_project 10 101595129 101598615 - Cfap54 protein_coding processed_transcript MGP_CBAJ_T0097897.1 MGP_CBAJ_G0036170.1 mouse_genomes_project 10 115990803 115990914 - n-R5s80 rRNA rRNA MGP_CBAJ_T0024486.1 MGP_CBAJ_G0016820.1 mouse_genomes_project 10 23737499 23739661 - MGP_CBAJ_P0024486 protein_coding protein_coding MGP_CBAJ_T0003012.1 MGP_CBAJ_G0002811.1 mouse_genomes_project 10 103351153 103399411 - Tmcc3os antisense antisense MGP_CBAJ_T0026567.1 MGP_CBAJ_G0017390.1 mouse_genomes_project 10 102264170 102268450 + MGP_CBAJ_P0026567 Ntn4 protein_coding protein_coding MGP_CBAJ_T0026568.1 MGP_CBAJ_G0017390.1 mouse_genomes_project 10 102264538 102390291 + MGP_CBAJ_P0026568 Ntn4 protein_coding protein_coding MGP_CBAJ_T0027323.1 MGP_CBAJ_G0017676.1 mouse_genomes_project 10 144428212 144442642 - MGP_CBAJ_P0027323 Neurod4 protein_coding protein_coding MGP_CBAJ_T0024574.1 MGP_CBAJ_G0016850.1 mouse_genomes_project 10 31011717 31081690 - MGP_CBAJ_P0024574 Trmt11 protein_coding protein_coding MGP_CBAJ_T0002997.1 MGP_CBAJ_G0002800.1 mouse_genomes_project 10 89287530 89318016 + Gm15608 antisense antisense MGP_CBAJ_T0002998.1 MGP_CBAJ_G0002800.1 mouse_genomes_project 10 89293790 89317997 + Gm15608 antisense antisense MGP_CBAJ_T0009508.1 MGP_CBAJ_G0007646.1 mouse_genomes_project 10 118968419 118968513 + Gm25591 miRNA miRNA MGP_CBAJ_T0026938.1 MGP_CBAJ_G0017519.1 mouse_genomes_project 10 134588600 134876531 - MGP_CBAJ_P0026938 Srgap1 protein_coding protein_coding MGP_CBAJ_T0026939.1 MGP_CBAJ_G0017519.1 mouse_genomes_project 10 134588600 134876524 - MGP_CBAJ_P0026939 Srgap1 protein_coding protein_coding MGP_CBAJ_T0026940.1 MGP_CBAJ_G0017519.1 mouse_genomes_project 10 134592840 134615470 - Srgap1 protein_coding processed_transcript MGP_CBAJ_T0026941.1 MGP_CBAJ_G0017519.1 mouse_genomes_project 10 134615005 134631795 - MGP_CBAJ_P0026941 Srgap1 protein_coding protein_coding MGP_CBAJ_T0026942.1 MGP_CBAJ_G0017519.1 mouse_genomes_project 10 134719940 134876531 - Srgap1 protein_coding retained_intron MGP_CBAJ_T0005985.1 MGP_CBAJ_G0005004.1 mouse_genomes_project 10 10971094 10977578 - B230208H11Rik lincRNA lincRNA MGP_CBAJ_T0005986.1 MGP_CBAJ_G0005004.1 mouse_genomes_project 10 10971125 10977568 - B230208H11Rik lincRNA lincRNA MGP_CBAJ_T0099872.1 MGP_CBAJ_G0038127.1 mouse_genomes_project 10 102583526 102583694 - Gm25962 snoRNA snoRNA MGP_CBAJ_T0026350.1 MGP_CBAJ_G0017342.1 mouse_genomes_project 10 93638965 93673134 + MGP_CBAJ_P0026350 Fbxo7 protein_coding protein_coding MGP_CBAJ_T0026351.1 MGP_CBAJ_G0017342.1 mouse_genomes_project 10 93639022 93667859 + MGP_CBAJ_P0026351 Fbxo7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026352.1 MGP_CBAJ_G0017342.1 mouse_genomes_project 10 93639054 93646160 + MGP_CBAJ_P0026352 Fbxo7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026353.1 MGP_CBAJ_G0017342.1 mouse_genomes_project 10 93639224 93667889 + MGP_CBAJ_P0026353 Fbxo7 protein_coding protein_coding MGP_CBAJ_T0026354.1 MGP_CBAJ_G0017342.1 mouse_genomes_project 10 93650006 93671437 + Fbxo7 protein_coding processed_transcript MGP_CBAJ_T0026355.1 MGP_CBAJ_G0017342.1 mouse_genomes_project 10 93662017 93666375 + Fbxo7 protein_coding retained_intron MGP_CBAJ_T0027110.1 MGP_CBAJ_G0017574.1 mouse_genomes_project 10 141541160 141554383 + MGP_CBAJ_P0027110 Sdr9c7 protein_coding protein_coding MGP_CBAJ_T0027111.1 MGP_CBAJ_G0017574.1 mouse_genomes_project 10 141541417 141554372 + Sdr9c7 protein_coding processed_transcript MGP_CBAJ_T0027112.1 MGP_CBAJ_G0017574.1 mouse_genomes_project 10 141544682 141553008 + Sdr9c7 protein_coding processed_transcript MGP_CBAJ_T0027113.1 MGP_CBAJ_G0017574.1 mouse_genomes_project 10 141546058 141552959 + Sdr9c7 protein_coding processed_transcript MGP_CBAJ_T0006006.1 MGP_CBAJ_G0005021.1 mouse_genomes_project 10 61085095 61093060 - 4930467K11Rik lincRNA lincRNA MGP_CBAJ_T0024425.1 MGP_CBAJ_G0016792.1 mouse_genomes_project 10 20481168 20570573 + MGP_CBAJ_P0024425 Hbs1l protein_coding protein_coding MGP_CBAJ_T0024426.1 MGP_CBAJ_G0016792.1 mouse_genomes_project 10 20481168 20498487 + MGP_CBAJ_P0024426 Hbs1l protein_coding protein_coding MGP_CBAJ_T0024427.1 MGP_CBAJ_G0016792.1 mouse_genomes_project 10 20481323 20570576 + MGP_CBAJ_P0024427 Hbs1l protein_coding unknown_likely_coding MGP_CBAJ_T0026647.1 MGP_CBAJ_G0017416.1 mouse_genomes_project 10 106957106 106958988 - MGP_CBAJ_P0026647 C030005K15Rik protein_coding protein_coding MGP_CBAJ_T0024633.1 MGP_CBAJ_G0016879.1 mouse_genomes_project 10 38361124 38366650 - MGP_CBAJ_P0024633 Marcks protein_coding protein_coding MGP_CBAJ_T0027195.1 MGP_CBAJ_G0017602.1 mouse_genomes_project 10 142337482 142343298 - MGP_CBAJ_P0027195 Zc3h10 protein_coding protein_coding MGP_CBAJ_T0027196.1 MGP_CBAJ_G0017602.1 mouse_genomes_project 10 142340321 142343267 - Zc3h10 protein_coding processed_transcript MGP_CBAJ_T0027197.1 MGP_CBAJ_G0017602.1 mouse_genomes_project 10 142340603 142343163 - Zc3h10 protein_coding processed_transcript MGP_CBAJ_T0027198.1 MGP_CBAJ_G0017602.1 mouse_genomes_project 10 142340861 142343249 - Zc3h10 protein_coding processed_transcript MGP_CBAJ_T0000784.1 MGP_CBAJ_G0000721.1 mouse_genomes_project 10 78781177 78781570 - TEC TEC MGP_CBAJ_T0025458.1 MGP_CBAJ_G0017092.1 mouse_genomes_project 10 81518091 81545424 + MGP_CBAJ_P0025458 Ggt5 protein_coding protein_coding MGP_CBAJ_T0025459.1 MGP_CBAJ_G0017092.1 mouse_genomes_project 10 81518132 81534004 + MGP_CBAJ_P0025459 Ggt5 protein_coding protein_coding MGP_CBAJ_T0025460.1 MGP_CBAJ_G0017092.1 mouse_genomes_project 10 81518543 81534006 + MGP_CBAJ_P0025460 Ggt5 protein_coding protein_coding MGP_CBAJ_T0025461.1 MGP_CBAJ_G0017092.1 mouse_genomes_project 10 81532683 81538058 + Ggt5 protein_coding processed_transcript MGP_CBAJ_T0024674.1 MGP_CBAJ_G0016888.1 mouse_genomes_project 10 41419705 41428984 - MGP_CBAJ_P0024674 Mfsd4b4 protein_coding protein_coding MGP_CBAJ_T0024675.1 MGP_CBAJ_G0016888.1 mouse_genomes_project 10 41419705 41425567 - MGP_CBAJ_P0024675 Mfsd4b4 protein_coding protein_coding MGP_CBAJ_T0027282.1 MGP_CBAJ_G0017646.1 mouse_genomes_project 10 143505617 143506480 + MGP_CBAJ_P0027282 Olfr792 protein_coding protein_coding MGP_CBAJ_T0002987.1 MGP_CBAJ_G0002793.1 mouse_genomes_project 10 87491298 87493414 - Gm17151 antisense antisense MGP_CBAJ_T0024828.1 MGP_CBAJ_G0016938.1 mouse_genomes_project 10 47320681 47416652 + MGP_CBAJ_P0024828 Prep protein_coding protein_coding MGP_CBAJ_T0099876.1 MGP_CBAJ_G0038131.1 mouse_genomes_project 10 113005294 113005427 + Gm25376 snoRNA snoRNA MGP_CBAJ_T0009452.1 MGP_CBAJ_G0007590.1 mouse_genomes_project 10 9889790 9889877 + Gm22194 miRNA miRNA MGP_CBAJ_T0009522.1 MGP_CBAJ_G0007660.1 mouse_genomes_project 10 142135844 142135913 - Gm26308 miRNA miRNA MGP_CBAJ_T0025435.1 MGP_CBAJ_G0017089.1 mouse_genomes_project 10 81441581 81461399 + MGP_CBAJ_P0025435 Snrpd3 protein_coding protein_coding MGP_CBAJ_T0025436.1 MGP_CBAJ_G0017089.1 mouse_genomes_project 10 81442044 81443897 + Snrpd3 protein_coding retained_intron MGP_CBAJ_T0024620.1 MGP_CBAJ_G0016875.1 mouse_genomes_project 10 35309942 35317021 + MGP_CBAJ_P0024620 Col10a1 protein_coding protein_coding MGP_CBAJ_T0027314.1 MGP_CBAJ_G0017668.1 mouse_genomes_project 10 144095015 144096076 + MGP_CBAJ_P0027314 Olfr820 protein_coding protein_coding MGP_CBAJ_T0027308.1 MGP_CBAJ_G0017664.1 mouse_genomes_project 10 143907592 143908543 - MGP_CBAJ_P0027308 Olfr814 protein_coding protein_coding MGP_CBAJ_T0027309.1 MGP_CBAJ_G0017664.1 mouse_genomes_project 10 143907592 143908525 - MGP_CBAJ_P0027309 Olfr814 protein_coding protein_coding MGP_CBAJ_T0098633.1 MGP_CBAJ_G0036888.1 mouse_genomes_project 10 72049043 72049144 - Gm26359 snRNA snRNA MGP_CBAJ_T0098647.1 MGP_CBAJ_G0036902.1 mouse_genomes_project 10 100969554 100969616 + Gm25884 snRNA snRNA MGP_CBAJ_T0025033.1 MGP_CBAJ_G0017004.1 mouse_genomes_project 10 64379034 64441482 - MGP_CBAJ_P0025033 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025034.1 MGP_CBAJ_G0017004.1 mouse_genomes_project 10 64379641 64442468 - MGP_CBAJ_P0025034 protein_coding unknown_likely_coding MGP_CBAJ_T0025035.1 MGP_CBAJ_G0017004.1 mouse_genomes_project 10 64379835 64391085 - protein_coding retained_intron MGP_CBAJ_T0025036.1 MGP_CBAJ_G0017004.1 mouse_genomes_project 10 64387629 64441493 - protein_coding processed_transcript MGP_CBAJ_T0027237.1 MGP_CBAJ_G0017620.1 mouse_genomes_project 10 142779620 142783517 + MGP_CBAJ_P0027237 Cd63 protein_coding protein_coding MGP_CBAJ_T0027238.1 MGP_CBAJ_G0017620.1 mouse_genomes_project 10 142780567 142783517 + MGP_CBAJ_P0027238 Cd63 protein_coding protein_coding MGP_CBAJ_T0025691.1 MGP_CBAJ_G0017172.1 mouse_genomes_project 10 85412914 85419506 + MGP_CBAJ_P0025691 Olfr1351 protein_coding protein_coding MGP_CBAJ_T0025692.1 MGP_CBAJ_G0017172.1 mouse_genomes_project 10 85417644 85419506 + MGP_CBAJ_P0025692 Olfr1351 protein_coding protein_coding MGP_CBAJ_T0024872.1 MGP_CBAJ_G0016955.1 mouse_genomes_project 10 55388686 55444061 - MGP_CBAJ_P0024872 Gopc protein_coding protein_coding MGP_CBAJ_T0024873.1 MGP_CBAJ_G0016955.1 mouse_genomes_project 10 55388686 55444061 - MGP_CBAJ_P0024873 Gopc protein_coding protein_coding MGP_CBAJ_T0024874.1 MGP_CBAJ_G0016955.1 mouse_genomes_project 10 55391385 55443835 - MGP_CBAJ_P0024874 Gopc protein_coding unknown_likely_coding MGP_CBAJ_T0026725.1 MGP_CBAJ_G0017444.1 mouse_genomes_project 10 117906364 117910693 - MGP_CBAJ_P0026725 Myf6 protein_coding protein_coding MGP_CBAJ_T0099867.1 MGP_CBAJ_G0038122.1 mouse_genomes_project 10 84168569 84168645 - Gm22394 snoRNA snoRNA MGP_CBAJ_T0006021.1 MGP_CBAJ_G0005032.1 mouse_genomes_project 10 76718240 76721491 + Gm20609 lincRNA lincRNA MGP_CBAJ_T0009505.1 MGP_CBAJ_G0007643.1 mouse_genomes_project 10 111370428 111370509 + Mir3059 miRNA miRNA MGP_CBAJ_T0024561.1 MGP_CBAJ_G0016844.1 mouse_genomes_project 10 29482821 29548686 + MGP_CBAJ_P0024561 Soga3 protein_coding protein_coding MGP_CBAJ_T0026642.1 MGP_CBAJ_G0017412.1 mouse_genomes_project 10 106815755 106822105 + MGP_CBAJ_P0026642 Kera protein_coding protein_coding MGP_CBAJ_T0012252.1 MGP_CBAJ_G0010364.1 mouse_genomes_project 10 25774119 25774685 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009496.1 MGP_CBAJ_G0007634.1 mouse_genomes_project 10 100476957 100477057 - Mir135a-2 miRNA miRNA MGP_CBAJ_T0024420.1 MGP_CBAJ_G0016790.1 mouse_genomes_project 10 20076657 20218731 + MGP_CBAJ_P0024420 Ahi1 protein_coding protein_coding MGP_CBAJ_T0024421.1 MGP_CBAJ_G0016790.1 mouse_genomes_project 10 20176259 20218731 + MGP_CBAJ_P0024421 Ahi1 protein_coding protein_coding MGP_CBAJ_T0009462.1 MGP_CBAJ_G0007600.1 mouse_genomes_project 10 48142793 48142908 - Gm27410 miRNA miRNA MGP_CBAJ_T0027040.1 MGP_CBAJ_G0017553.1 mouse_genomes_project 10 140845323 140867263 - MGP_CBAJ_P0027040 Inhbc protein_coding protein_coding MGP_CBAJ_T0024339.1 MGP_CBAJ_G0016765.1 mouse_genomes_project 10 16523125 16534789 + Txlnb protein_coding retained_intron MGP_CBAJ_T0024340.1 MGP_CBAJ_G0016765.1 mouse_genomes_project 10 16523155 16572036 + MGP_CBAJ_P0024340 Txlnb protein_coding protein_coding MGP_CBAJ_T0025202.1 MGP_CBAJ_G0017050.1 mouse_genomes_project 10 67691172 67691511 - MGP_CBAJ_P0025202 Gm7075 protein_coding protein_coding MGP_CBAJ_T0024963.1 MGP_CBAJ_G0016991.1 mouse_genomes_project 10 62894614 63087287 - MGP_CBAJ_P0024963 Mcu protein_coding protein_coding MGP_CBAJ_T0024964.1 MGP_CBAJ_G0016991.1 mouse_genomes_project 10 62896223 62905774 - MGP_CBAJ_P0024964 Mcu protein_coding protein_coding MGP_CBAJ_T0024965.1 MGP_CBAJ_G0016991.1 mouse_genomes_project 10 62993612 63087270 - MGP_CBAJ_P0024965 Mcu protein_coding nonsense_mediated_decay MGP_CBAJ_T0024966.1 MGP_CBAJ_G0016991.1 mouse_genomes_project 10 63070374 63087274 - Mcu protein_coding processed_transcript MGP_CBAJ_T0024967.1 MGP_CBAJ_G0016991.1 mouse_genomes_project 10 63071138 63087250 - Mcu protein_coding processed_transcript MGP_CBAJ_T0098615.1 MGP_CBAJ_G0036870.1 mouse_genomes_project 10 39999584 39999691 - Gm22911 snRNA snRNA MGP_CBAJ_T0027039.1 MGP_CBAJ_G0017552.1 mouse_genomes_project 10 140838395 140840763 - MGP_CBAJ_P0027039 Inhbe protein_coding protein_coding MGP_CBAJ_T0027310.1 MGP_CBAJ_G0017665.1 mouse_genomes_project 10 143945789 143946728 - MGP_CBAJ_P0027310 Olfr816 protein_coding protein_coding MGP_CBAJ_T0024694.1 MGP_CBAJ_G0016897.1 mouse_genomes_project 10 41961603 42110944 + MGP_CBAJ_P0024694 Cdk19 protein_coding protein_coding MGP_CBAJ_T0024695.1 MGP_CBAJ_G0016897.1 mouse_genomes_project 10 41961603 42110944 + MGP_CBAJ_P0024695 Cdk19 protein_coding protein_coding MGP_CBAJ_T0098625.1 MGP_CBAJ_G0036880.1 mouse_genomes_project 10 55991947 55992054 + Gm25664 snRNA snRNA MGP_CBAJ_T0003021.1 MGP_CBAJ_G0002817.1 mouse_genomes_project 10 128227146 128228966 + Kcnmb4os2 antisense antisense MGP_CBAJ_T0003022.1 MGP_CBAJ_G0002817.1 mouse_genomes_project 10 128228011 128229303 + Kcnmb4os2 antisense antisense MGP_CBAJ_T0003023.1 MGP_CBAJ_G0002817.1 mouse_genomes_project 10 128228328 128228971 + Kcnmb4os2 antisense antisense MGP_CBAJ_T0024616.1 MGP_CBAJ_G0016874.1 mouse_genomes_project 10 35202549 35206428 + MGP_CBAJ_P0024616 Tspyl4 protein_coding protein_coding MGP_CBAJ_T0026717.1 MGP_CBAJ_G0017440.1 mouse_genomes_project 10 116733067 117255525 + MGP_CBAJ_P0026717 Ppfia2 protein_coding protein_coding MGP_CBAJ_T0026718.1 MGP_CBAJ_G0017440.1 mouse_genomes_project 10 116733103 117074213 + MGP_CBAJ_P0026718 Ppfia2 protein_coding protein_coding MGP_CBAJ_T0025091.1 MGP_CBAJ_G0017023.1 mouse_genomes_project 10 66043205 66048409 + MGP_CBAJ_P0025091 Gm5424 protein_coding protein_coding MGP_CBAJ_T0101515.1 MGP_CBAJ_G0039547.1 mouse_genomes_project 10 61534513 61538974 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0024086.1 MGP_CBAJ_G0016709.1 mouse_genomes_project 10 1290644 1396856 + MGP_CBAJ_P0024086 Akap12 protein_coding protein_coding MGP_CBAJ_T0024368.1 MGP_CBAJ_G0016774.1 mouse_genomes_project 10 17632690 17642620 - MGP_CBAJ_P0024368 Gm4922 protein_coding protein_coding MGP_CBAJ_T0024384.1 MGP_CBAJ_G0016780.1 mouse_genomes_project 10 18607098 18627207 + MGP_CBAJ_P0024384 protein_coding protein_coding MGP_CBAJ_T0024654.1 MGP_CBAJ_G0016885.1 mouse_genomes_project 10 40851260 41007068 + MGP_CBAJ_P0024654 Fyn protein_coding protein_coding MGP_CBAJ_T0024655.1 MGP_CBAJ_G0016885.1 mouse_genomes_project 10 40852204 41059490 + MGP_CBAJ_P0024655 Fyn protein_coding protein_coding MGP_CBAJ_T0024656.1 MGP_CBAJ_G0016885.1 mouse_genomes_project 10 40852243 41058532 + MGP_CBAJ_P0024656 Fyn protein_coding protein_coding MGP_CBAJ_T0024657.1 MGP_CBAJ_G0016885.1 mouse_genomes_project 10 40903843 41003259 + MGP_CBAJ_P0024657 Fyn protein_coding protein_coding MGP_CBAJ_T0024658.1 MGP_CBAJ_G0016885.1 mouse_genomes_project 10 40932242 41059483 + MGP_CBAJ_P0024658 Fyn protein_coding protein_coding MGP_CBAJ_T0024659.1 MGP_CBAJ_G0016885.1 mouse_genomes_project 10 40942829 41058464 + MGP_CBAJ_P0024659 Fyn protein_coding protein_coding MGP_CBAJ_T0024660.1 MGP_CBAJ_G0016885.1 mouse_genomes_project 10 40942939 41058464 + MGP_CBAJ_P0024660 Fyn protein_coding protein_coding MGP_CBAJ_T0024661.1 MGP_CBAJ_G0016885.1 mouse_genomes_project 10 41024662 41042811 + Fyn protein_coding processed_transcript MGP_CBAJ_T0009510.1 MGP_CBAJ_G0007648.1 mouse_genomes_project 10 128290692 128290787 - Gm25190 miRNA miRNA MGP_CBAJ_T0026897.1 MGP_CBAJ_G0017504.1 mouse_genomes_project 10 132649157 132721917 - MGP_CBAJ_P0026897 Irak3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026898.1 MGP_CBAJ_G0017504.1 mouse_genomes_project 10 132649709 132721878 - MGP_CBAJ_P0026898 Irak3 protein_coding protein_coding MGP_CBAJ_T0026899.1 MGP_CBAJ_G0017504.1 mouse_genomes_project 10 132668826 132683497 - Irak3 protein_coding processed_transcript MGP_CBAJ_T0026900.1 MGP_CBAJ_G0017504.1 mouse_genomes_project 10 132676020 132722006 - Irak3 protein_coding retained_intron MGP_CBAJ_T0024578.1 MGP_CBAJ_G0016852.1 mouse_genomes_project 10 31129635 31304643 - MGP_CBAJ_P0024578 Ncoa7 protein_coding unknown_likely_coding MGP_CBAJ_T0024579.1 MGP_CBAJ_G0016852.1 mouse_genomes_project 10 31129636 31139913 - MGP_CBAJ_P0024579 Ncoa7 protein_coding protein_coding MGP_CBAJ_T0024580.1 MGP_CBAJ_G0016852.1 mouse_genomes_project 10 31129636 31304848 - MGP_CBAJ_P0024580 Ncoa7 protein_coding protein_coding MGP_CBAJ_T0099891.1 MGP_CBAJ_G0038146.1 mouse_genomes_project 10 142099538 142099673 + Gm23182 snoRNA snoRNA MGP_CBAJ_T0099883.1 MGP_CBAJ_G0038138.1 mouse_genomes_project 10 122463526 122463670 + Gm25117 snoRNA snoRNA MGP_CBAJ_T0024239.1 MGP_CBAJ_G0016743.1 mouse_genomes_project 10 8504786 8505297 + MGP_CBAJ_P0024239 Gm10944 protein_coding protein_coding MGP_CBAJ_T0026943.1 MGP_CBAJ_G0017520.1 mouse_genomes_project 10 134911266 134930751 - MGP_CBAJ_P0026943 Tmem5 protein_coding protein_coding MGP_CBAJ_T0026944.1 MGP_CBAJ_G0017520.1 mouse_genomes_project 10 134913975 134930536 - MGP_CBAJ_P0026944 Tmem5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026945.1 MGP_CBAJ_G0017520.1 mouse_genomes_project 10 134914397 134922769 - Tmem5 protein_coding retained_intron MGP_CBAJ_T0026946.1 MGP_CBAJ_G0017520.1 mouse_genomes_project 10 134922024 134924085 - Tmem5 protein_coding retained_intron MGP_CBAJ_T0026947.1 MGP_CBAJ_G0017520.1 mouse_genomes_project 10 134922401 134929516 - Tmem5 protein_coding retained_intron MGP_CBAJ_T0026948.1 MGP_CBAJ_G0017520.1 mouse_genomes_project 10 134929435 134930506 - Tmem5 protein_coding processed_transcript MGP_CBAJ_T0099878.1 MGP_CBAJ_G0038133.1 mouse_genomes_project 10 116269617 116269739 - Gm25342 snoRNA snoRNA MGP_CBAJ_T0026864.1 MGP_CBAJ_G0017496.1 mouse_genomes_project 10 129795418 129844919 - MGP_CBAJ_P0026864 Nup107 protein_coding protein_coding MGP_CBAJ_T0026865.1 MGP_CBAJ_G0017496.1 mouse_genomes_project 10 129795437 129844926 - MGP_CBAJ_P0026865 Nup107 protein_coding protein_coding MGP_CBAJ_T0024954.1 MGP_CBAJ_G0016986.1 mouse_genomes_project 10 62564911 62629155 - MGP_CBAJ_P0024954 Sept10 protein_coding protein_coding MGP_CBAJ_T0024434.1 MGP_CBAJ_G0016796.1 mouse_genomes_project 10 21134515 21266348 + MGP_CBAJ_P0024434 Sgk1 protein_coding protein_coding MGP_CBAJ_T0024435.1 MGP_CBAJ_G0016796.1 mouse_genomes_project 10 21134700 21151479 + Sgk1 protein_coding processed_transcript MGP_CBAJ_T0024436.1 MGP_CBAJ_G0016796.1 mouse_genomes_project 10 21183492 21254683 + MGP_CBAJ_P0024436 Sgk1 protein_coding protein_coding MGP_CBAJ_T0024437.1 MGP_CBAJ_G0016796.1 mouse_genomes_project 10 21236852 21262348 + MGP_CBAJ_P0024437 Sgk1 protein_coding protein_coding MGP_CBAJ_T0024438.1 MGP_CBAJ_G0016796.1 mouse_genomes_project 10 21256503 21266353 + MGP_CBAJ_P0024438 Sgk1 protein_coding protein_coding MGP_CBAJ_T0024439.1 MGP_CBAJ_G0016796.1 mouse_genomes_project 10 21256503 21262329 + MGP_CBAJ_P0024439 Sgk1 protein_coding protein_coding MGP_CBAJ_T0024440.1 MGP_CBAJ_G0016796.1 mouse_genomes_project 10 21260343 21266346 + MGP_CBAJ_P0024440 Sgk1 protein_coding protein_coding MGP_CBAJ_T0024441.1 MGP_CBAJ_G0016796.1 mouse_genomes_project 10 21261136 21262056 + Sgk1 protein_coding retained_intron MGP_CBAJ_T0024442.1 MGP_CBAJ_G0016796.1 mouse_genomes_project 10 21261139 21266357 + MGP_CBAJ_P0024442 Sgk1 protein_coding protein_coding MGP_CBAJ_T0024443.1 MGP_CBAJ_G0016796.1 mouse_genomes_project 10 21261164 21262796 + Sgk1 protein_coding retained_intron MGP_CBAJ_T0024444.1 MGP_CBAJ_G0016796.1 mouse_genomes_project 10 21261363 21263889 + MGP_CBAJ_P0024444 Sgk1 protein_coding protein_coding MGP_CBAJ_T0024445.1 MGP_CBAJ_G0016796.1 mouse_genomes_project 10 21263045 21264695 + Sgk1 protein_coding retained_intron MGP_CBAJ_T0025105.1 MGP_CBAJ_G0017027.1 mouse_genomes_project 10 66272816 66288757 + MGP_CBAJ_P0025105 Tacr2 protein_coding protein_coding MGP_CBAJ_T0026704.1 MGP_CBAJ_G0017437.1 mouse_genomes_project 10 115295522 115345312 - Tmtc2 protein_coding processed_transcript MGP_CBAJ_T0026705.1 MGP_CBAJ_G0017437.1 mouse_genomes_project 10 115295522 115730564 - MGP_CBAJ_P0026705 Tmtc2 protein_coding protein_coding MGP_CBAJ_T0026706.1 MGP_CBAJ_G0017437.1 mouse_genomes_project 10 115297363 115345297 - Tmtc2 protein_coding processed_transcript MGP_CBAJ_T0026707.1 MGP_CBAJ_G0017437.1 mouse_genomes_project 10 115297522 115307603 - Tmtc2 protein_coding processed_transcript MGP_CBAJ_T0026708.1 MGP_CBAJ_G0017437.1 mouse_genomes_project 10 115390116 115730580 - Tmtc2 protein_coding retained_intron MGP_CBAJ_T0026709.1 MGP_CBAJ_G0017437.1 mouse_genomes_project 10 115548460 115688146 - Tmtc2 protein_coding processed_transcript MGP_CBAJ_T0024995.1 MGP_CBAJ_G0016997.1 mouse_genomes_project 10 63530746 63636312 + MGP_CBAJ_P0024995 Ascc1 protein_coding protein_coding MGP_CBAJ_T0024996.1 MGP_CBAJ_G0016997.1 mouse_genomes_project 10 63531268 63636312 + MGP_CBAJ_P0024996 Ascc1 protein_coding protein_coding MGP_CBAJ_T0009523.1 MGP_CBAJ_G0007661.1 mouse_genomes_project 10 142140659 142140728 + Mir6914 miRNA miRNA MGP_CBAJ_T0099859.1 MGP_CBAJ_G0038114.1 mouse_genomes_project 10 62601531 62601658 + Gm23223 snoRNA snoRNA MGP_CBAJ_T0024592.1 MGP_CBAJ_G0016858.1 mouse_genomes_project 10 32311587 33628881 - MGP_CBAJ_P0024592 Nkain2 protein_coding protein_coding MGP_CBAJ_T0024593.1 MGP_CBAJ_G0016858.1 mouse_genomes_project 10 33024741 33118719 - MGP_CBAJ_P0024593 Nkain2 protein_coding protein_coding MGP_CBAJ_T0024594.1 MGP_CBAJ_G0016858.1 mouse_genomes_project 10 33628324 33628882 - MGP_CBAJ_P0024594 Nkain2 protein_coding protein_coding MGP_CBAJ_T0099837.1 MGP_CBAJ_G0038092.1 mouse_genomes_project 10 12459835 12459946 + Gm24343 snoRNA snoRNA MGP_CBAJ_T0026325.1 MGP_CBAJ_G0017332.1 mouse_genomes_project 10 92607282 92624113 + MGP_CBAJ_P0026325 Tmem263 protein_coding protein_coding MGP_CBAJ_T0003028.1 MGP_CBAJ_G0002820.1 mouse_genomes_project 10 132176301 132196419 - Grip1os2 antisense antisense MGP_CBAJ_T0026659.1 MGP_CBAJ_G0017422.1 mouse_genomes_project 10 108870771 108874052 + MGP_CBAJ_P0026659 Gad1-ps protein_coding protein_coding MGP_CBAJ_T0005982.1 MGP_CBAJ_G0005002.1 mouse_genomes_project 10 7774060 7956329 + Gm28905 lincRNA lincRNA MGP_CBAJ_T0025532.1 MGP_CBAJ_G0017120.1 mouse_genomes_project 10 82647765 82665445 + MGP_CBAJ_P0025532 Ftcd protein_coding protein_coding MGP_CBAJ_T0025533.1 MGP_CBAJ_G0017120.1 mouse_genomes_project 10 82647769 82666222 + Ftcd protein_coding retained_intron MGP_CBAJ_T0025534.1 MGP_CBAJ_G0017120.1 mouse_genomes_project 10 82647823 82665196 + MGP_CBAJ_P0025534 Ftcd protein_coding unknown_likely_coding MGP_CBAJ_T0025535.1 MGP_CBAJ_G0017120.1 mouse_genomes_project 10 82663016 82664452 + Ftcd protein_coding processed_transcript MGP_CBAJ_T0024832.1 MGP_CBAJ_G0016940.1 mouse_genomes_project 10 47613687 47654970 + MGP_CBAJ_P0024832 Bves protein_coding protein_coding MGP_CBAJ_T0025689.1 MGP_CBAJ_G0017171.1 mouse_genomes_project 10 85370185 85374459 + MGP_CBAJ_P0025689 Olfr1352 protein_coding protein_coding MGP_CBAJ_T0025690.1 MGP_CBAJ_G0017171.1 mouse_genomes_project 10 85370250 85373996 + MGP_CBAJ_P0025690 Olfr1352 protein_coding protein_coding MGP_CBAJ_T0098617.1 MGP_CBAJ_G0036872.1 mouse_genomes_project 10 43122473 43122580 + Gm25626 snRNA snRNA MGP_CBAJ_T0026400.1 MGP_CBAJ_G0017356.1 mouse_genomes_project 10 95975418 96034818 - MGP_CBAJ_P0026400 Parpbp protein_coding protein_coding MGP_CBAJ_T0026401.1 MGP_CBAJ_G0017356.1 mouse_genomes_project 10 96011852 96034755 - MGP_CBAJ_P0026401 Parpbp protein_coding protein_coding MGP_CBAJ_T0026402.1 MGP_CBAJ_G0017356.1 mouse_genomes_project 10 96011872 96034810 - MGP_CBAJ_P0026402 Parpbp protein_coding protein_coding MGP_CBAJ_T0026403.1 MGP_CBAJ_G0017356.1 mouse_genomes_project 10 96018062 96034755 - MGP_CBAJ_P0026403 Parpbp protein_coding protein_coding MGP_CBAJ_T0012291.1 MGP_CBAJ_G0010403.1 mouse_genomes_project 10 112204208 112205153 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0024842.1 MGP_CBAJ_G0016943.1 mouse_genomes_project 10 51818225 52636503 - MGP_CBAJ_P0024842 Grik2 protein_coding protein_coding MGP_CBAJ_T0024843.1 MGP_CBAJ_G0016943.1 mouse_genomes_project 10 51818608 51998039 - Grik2 protein_coding retained_intron MGP_CBAJ_T0024844.1 MGP_CBAJ_G0016943.1 mouse_genomes_project 10 51818608 52630994 - MGP_CBAJ_P0024844 Grik2 protein_coding protein_coding MGP_CBAJ_T0024845.1 MGP_CBAJ_G0016943.1 mouse_genomes_project 10 51819492 52630994 - MGP_CBAJ_P0024845 Grik2 protein_coding protein_coding MGP_CBAJ_T0024846.1 MGP_CBAJ_G0016943.1 mouse_genomes_project 10 51819754 52631144 - MGP_CBAJ_P0024846 Grik2 protein_coding protein_coding MGP_CBAJ_T0024847.1 MGP_CBAJ_G0016943.1 mouse_genomes_project 10 51819893 51822638 - Grik2 protein_coding retained_intron MGP_CBAJ_T0024848.1 MGP_CBAJ_G0016943.1 mouse_genomes_project 10 51823483 52630994 - MGP_CBAJ_P0024848 Grik2 protein_coding protein_coding MGP_CBAJ_T0024849.1 MGP_CBAJ_G0016943.1 mouse_genomes_project 10 52305460 52636491 - MGP_CBAJ_P0024849 Grik2 protein_coding protein_coding MGP_CBAJ_T0012298.1 MGP_CBAJ_G0010410.1 mouse_genomes_project 10 130380323 130381590 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0026664.1 MGP_CBAJ_G0017425.1 mouse_genomes_project 10 109820816 109826368 - MGP_CBAJ_P0026664 protein_coding protein_coding MGP_CBAJ_T0024629.1 MGP_CBAJ_G0016878.1 mouse_genomes_project 10 38186926 38217731 + MGP_CBAJ_P0024629 Hdac2 protein_coding protein_coding MGP_CBAJ_T0024630.1 MGP_CBAJ_G0016878.1 mouse_genomes_project 10 38186952 38208494 + MGP_CBAJ_P0024630 Hdac2 protein_coding protein_coding MGP_CBAJ_T0024631.1 MGP_CBAJ_G0016878.1 mouse_genomes_project 10 38204148 38217730 + Hdac2 protein_coding processed_transcript MGP_CBAJ_T0024632.1 MGP_CBAJ_G0016878.1 mouse_genomes_project 10 38214013 38217453 + Hdac2 protein_coding retained_intron MGP_CBAJ_T0026220.1 MGP_CBAJ_G0017303.1 mouse_genomes_project 10 88506820 88527617 + BC025920 protein_coding processed_transcript MGP_CBAJ_T0026221.1 MGP_CBAJ_G0017303.1 mouse_genomes_project 10 88506853 88510387 + MGP_CBAJ_P0026221 BC025920 protein_coding protein_coding MGP_CBAJ_T0026222.1 MGP_CBAJ_G0017303.1 mouse_genomes_project 10 88507433 88510096 + MGP_CBAJ_P0026222 BC025920 protein_coding protein_coding MGP_CBAJ_T0026223.1 MGP_CBAJ_G0017303.1 mouse_genomes_project 10 88507433 88510096 + MGP_CBAJ_P0026223 BC025920 protein_coding protein_coding MGP_CBAJ_T0026224.1 MGP_CBAJ_G0017303.1 mouse_genomes_project 10 88507575 88510360 + MGP_CBAJ_P0026224 BC025920 protein_coding protein_coding MGP_CBAJ_T0025580.1 MGP_CBAJ_G0017130.1 mouse_genomes_project 10 83655788 83686367 - MGP_CBAJ_P0025580 Fam207a protein_coding protein_coding MGP_CBAJ_T0024341.1 MGP_CBAJ_G0016766.1 mouse_genomes_project 10 16648887 16704753 - MGP_CBAJ_P0024341 Heca protein_coding protein_coding MGP_CBAJ_T0098656.1 MGP_CBAJ_G0036911.1 mouse_genomes_project 10 122050519 122050622 - Gm22101 snRNA snRNA MGP_CBAJ_T0012253.1 MGP_CBAJ_G0010365.1 mouse_genomes_project 10 25774121 25774731 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0026770.1 MGP_CBAJ_G0017460.1 mouse_genomes_project 10 123183312 123241812 + MGP_CBAJ_P0026770 Glipr1l2 protein_coding protein_coding MGP_CBAJ_T0026771.1 MGP_CBAJ_G0017460.1 mouse_genomes_project 10 123183312 123242599 + MGP_CBAJ_P0026771 Glipr1l2 protein_coding protein_coding MGP_CBAJ_T0026123.1 MGP_CBAJ_G0017287.1 mouse_genomes_project 10 88181342 88188643 - MGP_CBAJ_P0026123 Gipc3 protein_coding protein_coding MGP_CBAJ_T0012250.1 MGP_CBAJ_G0010362.1 mouse_genomes_project 10 24287995 24288736 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0026478.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98012320 99228103 + MGP_CBAJ_P0026478 protein_coding protein_coding MGP_CBAJ_T0026479.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98012349 98720929 + MGP_CBAJ_P0026479 protein_coding protein_coding MGP_CBAJ_T0026480.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98012449 99224276 + MGP_CBAJ_P0026480 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026481.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98012483 98905584 + MGP_CBAJ_P0026481 protein_coding protein_coding MGP_CBAJ_T0026482.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98153110 98196396 + protein_coding processed_transcript MGP_CBAJ_T0026483.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98212378 98233829 + protein_coding processed_transcript MGP_CBAJ_T0026484.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98233861 98242171 + MGP_CBAJ_P0026484 protein_coding protein_coding MGP_CBAJ_T0026485.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98789664 99233612 + MGP_CBAJ_P0026485 protein_coding protein_coding MGP_CBAJ_T0026486.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98790180 99172314 + MGP_CBAJ_P0026486 protein_coding protein_coding MGP_CBAJ_T0026487.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98790304 99228142 + MGP_CBAJ_P0026487 protein_coding protein_coding MGP_CBAJ_T0026488.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98790442 99231771 + MGP_CBAJ_P0026488 protein_coding protein_coding MGP_CBAJ_T0026489.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98790496 99232014 + MGP_CBAJ_P0026489 protein_coding protein_coding MGP_CBAJ_T0026490.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98790538 99228096 + MGP_CBAJ_P0026490 protein_coding protein_coding MGP_CBAJ_T0026491.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98790617 99228748 + MGP_CBAJ_P0026491 protein_coding protein_coding MGP_CBAJ_T0026492.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98790644 99231976 + MGP_CBAJ_P0026492 protein_coding protein_coding MGP_CBAJ_T0026493.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98790662 99232014 + MGP_CBAJ_P0026493 protein_coding protein_coding MGP_CBAJ_T0026494.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98790675 98817156 + protein_coding processed_transcript MGP_CBAJ_T0026495.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98790676 98803765 + MGP_CBAJ_P0026495 protein_coding protein_coding MGP_CBAJ_T0026496.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98790692 98803912 + MGP_CBAJ_P0026496 protein_coding protein_coding MGP_CBAJ_T0026497.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98790727 99228863 + MGP_CBAJ_P0026497 protein_coding protein_coding MGP_CBAJ_T0026498.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98790741 99232303 + MGP_CBAJ_P0026498 protein_coding protein_coding MGP_CBAJ_T0026499.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98790891 99228103 + MGP_CBAJ_P0026499 protein_coding protein_coding MGP_CBAJ_T0026500.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 98790918 99227704 + MGP_CBAJ_P0026500 protein_coding protein_coding MGP_CBAJ_T0026501.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 99069285 99145694 + protein_coding processed_transcript MGP_CBAJ_T0026502.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 99073982 99228096 + MGP_CBAJ_P0026502 protein_coding protein_coding MGP_CBAJ_T0026503.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 99074114 99231769 + MGP_CBAJ_P0026503 protein_coding protein_coding MGP_CBAJ_T0026504.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 99077721 99231596 + MGP_CBAJ_P0026504 protein_coding protein_coding MGP_CBAJ_T0026505.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 99077759 99163119 + protein_coding processed_transcript MGP_CBAJ_T0026506.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 99077783 99172339 + protein_coding processed_transcript MGP_CBAJ_T0026507.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 99143463 99174737 + MGP_CBAJ_P0026507 protein_coding protein_coding MGP_CBAJ_T0026508.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 99143474 99231769 + MGP_CBAJ_P0026508 protein_coding protein_coding MGP_CBAJ_T0026509.1 MGP_CBAJ_G0017375.1 mouse_genomes_project 10 99143554 99227976 + MGP_CBAJ_P0026509 protein_coding protein_coding MGP_CBAJ_T0024612.1 MGP_CBAJ_G0016870.1 mouse_genomes_project 10 35007550 35009454 - MGP_CBAJ_P0024612 Fam26f protein_coding protein_coding MGP_CBAJ_T0026182.1 MGP_CBAJ_G0017297.1 mouse_genomes_project 10 88376720 88379105 - MGP_CBAJ_P0026182 S1pr4 protein_coding protein_coding MGP_CBAJ_T0012245.1 MGP_CBAJ_G0010357.1 mouse_genomes_project 10 19574568 19578079 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0025519.1 MGP_CBAJ_G0017115.1 mouse_genomes_project 10 82505624 82514148 + MGP_CBAJ_P0025519 2610028H24Rik protein_coding protein_coding MGP_CBAJ_T0025156.1 MGP_CBAJ_G0017038.1 mouse_genomes_project 10 66855321 66938570 - MGP_CBAJ_P0025156 Ccar1 protein_coding protein_coding MGP_CBAJ_T0025719.1 MGP_CBAJ_G0017183.1 mouse_genomes_project 10 86152229 86172156 - MGP_CBAJ_P0025719 Shc2 protein_coding protein_coding MGP_CBAJ_T0025720.1 MGP_CBAJ_G0017183.1 mouse_genomes_project 10 86152358 86157032 - Shc2 protein_coding retained_intron MGP_CBAJ_T0025721.1 MGP_CBAJ_G0017183.1 mouse_genomes_project 10 86154398 86157388 - Shc2 protein_coding retained_intron MGP_CBAJ_T0009491.1 MGP_CBAJ_G0007629.1 mouse_genomes_project 10 88267077 88267135 - Mir1191b miRNA miRNA MGP_CBAJ_T0006035.1 MGP_CBAJ_G0005043.1 mouse_genomes_project 10 94401987 94409054 + lincRNA lincRNA MGP_CBAJ_T0026322.1 MGP_CBAJ_G0017330.1 mouse_genomes_project 10 92421402 92520775 + MGP_CBAJ_P0026322 Ric8b protein_coding protein_coding MGP_CBAJ_T0026323.1 MGP_CBAJ_G0017330.1 mouse_genomes_project 10 92421442 92520775 + MGP_CBAJ_P0026323 Ric8b protein_coding protein_coding MGP_CBAJ_T0026833.1 MGP_CBAJ_G0017484.1 mouse_genomes_project 10 128911993 128913421 + MGP_CBAJ_P0026833 Lrrc10 protein_coding protein_coding MGP_CBAJ_T0101527.1 MGP_CBAJ_G0039559.1 mouse_genomes_project 10 143967444 143968835 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099846.1 MGP_CBAJ_G0038101.1 mouse_genomes_project 10 36090067 36090201 + Gm26341 snoRNA snoRNA MGP_CBAJ_T0025081.1 MGP_CBAJ_G0017021.1 mouse_genomes_project 10 65650328 65710627 - MGP_CBAJ_P0025081 H2afy2 protein_coding protein_coding MGP_CBAJ_T0097752.1 MGP_CBAJ_G0036025.1 mouse_genomes_project 10 84049694 84053340 - pseudogene pseudogene MGP_CBAJ_T0005981.1 MGP_CBAJ_G0005001.1 mouse_genomes_project 10 7195315 7202048 - Gm28904 lincRNA lincRNA MGP_CBAJ_T0009524.1 MGP_CBAJ_G0007662.1 mouse_genomes_project 10 142146648 142146717 + Mir6915 miRNA miRNA MGP_CBAJ_T0099858.1 MGP_CBAJ_G0038113.1 mouse_genomes_project 10 62061358 62061434 - Gm25055 snoRNA snoRNA MGP_CBAJ_T0024466.1 MGP_CBAJ_G0016805.1 mouse_genomes_project 10 23354483 23356468 - MGP_CBAJ_P0024466 Rps12 protein_coding protein_coding MGP_CBAJ_T0025468.1 MGP_CBAJ_G0017097.1 mouse_genomes_project 10 81715458 81722743 - MGP_CBAJ_P0025468 Gstt3 protein_coding protein_coding MGP_CBAJ_T0025469.1 MGP_CBAJ_G0017097.1 mouse_genomes_project 10 81716143 81718604 - Gstt3 protein_coding processed_transcript MGP_CBAJ_T0025470.1 MGP_CBAJ_G0017097.1 mouse_genomes_project 10 81716263 81722347 - MGP_CBAJ_P0025470 Gstt3 protein_coding protein_coding MGP_CBAJ_T0025471.1 MGP_CBAJ_G0017097.1 mouse_genomes_project 10 81716743 81718208 - MGP_CBAJ_P0025471 Gstt3 protein_coding protein_coding MGP_CBAJ_T0025472.1 MGP_CBAJ_G0017097.1 mouse_genomes_project 10 81718097 81722379 - MGP_CBAJ_P0025472 Gstt3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024528.1 MGP_CBAJ_G0016835.1 mouse_genomes_project 10 26058275 26059468 + MGP_CBAJ_P0024528 Gm9767 protein_coding protein_coding MGP_CBAJ_T0024602.1 MGP_CBAJ_G0016862.1 mouse_genomes_project 10 34717659 34738607 + MGP_CBAJ_P0024602 Sult3a1 protein_coding protein_coding MGP_CBAJ_T0026710.1 MGP_CBAJ_G0017438.1 mouse_genomes_project 10 115942416 116024461 - MGP_CBAJ_P0026710 Mettl25 protein_coding protein_coding MGP_CBAJ_T0026711.1 MGP_CBAJ_G0017438.1 mouse_genomes_project 10 115942482 116024463 - MGP_CBAJ_P0026711 Mettl25 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026712.1 MGP_CBAJ_G0017438.1 mouse_genomes_project 10 116009655 116024454 - MGP_CBAJ_P0026712 Mettl25 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026713.1 MGP_CBAJ_G0017438.1 mouse_genomes_project 10 116022287 116024294 - Mettl25 protein_coding processed_transcript MGP_CBAJ_T0009503.1 MGP_CBAJ_G0007641.1 mouse_genomes_project 10 105979576 105979665 - Gm24587 miRNA miRNA MGP_CBAJ_T0097890.1 MGP_CBAJ_G0036163.1 mouse_genomes_project 10 31907711 31907824 - n-R5s76 rRNA rRNA MGP_CBAJ_T0006050.1 MGP_CBAJ_G0005048.1 mouse_genomes_project 10 100572113 100574682 + Gm26700 lincRNA lincRNA MGP_CBAJ_T0027315.1 MGP_CBAJ_G0017669.1 mouse_genomes_project 10 144108045 144113023 + MGP_CBAJ_P0027315 Olfr821 protein_coding protein_coding MGP_CBAJ_T0027316.1 MGP_CBAJ_G0017669.1 mouse_genomes_project 10 144112090 144113023 + MGP_CBAJ_P0027316 Olfr821 protein_coding protein_coding MGP_CBAJ_T0027236.1 MGP_CBAJ_G0017619.1 mouse_genomes_project 10 142746039 142755456 - MGP_CBAJ_P0027236 Gdf11 protein_coding protein_coding MGP_CBAJ_T0027273.1 MGP_CBAJ_G0017638.1 mouse_genomes_project 10 143368975 143369914 + MGP_CBAJ_P0027273 Gm44444 protein_coding protein_coding MGP_CBAJ_T0024699.1 MGP_CBAJ_G0016900.1 mouse_genomes_project 10 42330814 42487412 + MGP_CBAJ_P0024699 Mettl24 protein_coding protein_coding MGP_CBAJ_T0000787.1 MGP_CBAJ_G0000724.1 mouse_genomes_project 10 87181154 87182009 + TEC TEC MGP_CBAJ_T0024338.1 MGP_CBAJ_G0016764.1 mouse_genomes_project 10 16441015 16443461 + MGP_CBAJ_P0024338 Cited2 protein_coding protein_coding MGP_CBAJ_T0027170.1 MGP_CBAJ_G0017591.1 mouse_genomes_project 10 142068009 142074419 + MGP_CBAJ_P0027170 Cnpy2 protein_coding protein_coding MGP_CBAJ_T0024482.1 MGP_CBAJ_G0016816.1 mouse_genomes_project 10 23595688 23596921 + MGP_CBAJ_P0024482 protein_coding protein_coding MGP_CBAJ_T0026694.1 MGP_CBAJ_G0017432.1 mouse_genomes_project 10 112224195 112234628 - MGP_CBAJ_P0026694 Nts protein_coding protein_coding MGP_CBAJ_T0024676.1 MGP_CBAJ_G0016889.1 mouse_genomes_project 10 41457331 41463873 - MGP_CBAJ_P0024676 Mfsd4b2 protein_coding protein_coding MGP_CBAJ_T0012300.1 MGP_CBAJ_G0010412.1 mouse_genomes_project 10 133599738 133600525 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0024546.1 MGP_CBAJ_G0016840.1 mouse_genomes_project 10 28296142 28866395 + MGP_CBAJ_P0024546 Ptprk protein_coding protein_coding MGP_CBAJ_T0024547.1 MGP_CBAJ_G0016840.1 mouse_genomes_project 10 28296403 28833177 + MGP_CBAJ_P0024547 Ptprk protein_coding unknown_likely_coding MGP_CBAJ_T0024548.1 MGP_CBAJ_G0016840.1 mouse_genomes_project 10 28730785 28833177 + MGP_CBAJ_P0024548 Ptprk protein_coding unknown_likely_coding MGP_CBAJ_T0024383.1 MGP_CBAJ_G0016779.1 mouse_genomes_project 10 18584381 18597041 + MGP_CBAJ_P0024383 Il22ra2 protein_coding protein_coding MGP_CBAJ_T0026636.1 MGP_CBAJ_G0017407.1 mouse_genomes_project 10 104619009 104619470 - MGP_CBAJ_P0026636 Anapc15-ps protein_coding protein_coding MGP_CBAJ_T0099870.1 MGP_CBAJ_G0038125.1 mouse_genomes_project 10 99410374 99410620 - Gm24119 snoRNA snoRNA MGP_CBAJ_T0097888.1 MGP_CBAJ_G0036161.1 mouse_genomes_project 10 26353176 26353276 + Gm23757 rRNA rRNA MGP_CBAJ_T0027212.1 MGP_CBAJ_G0017607.1 mouse_genomes_project 10 142447263 142462367 - MGP_CBAJ_P0027212 Ikzf4 protein_coding protein_coding MGP_CBAJ_T0027213.1 MGP_CBAJ_G0017607.1 mouse_genomes_project 10 142448803 142462202 - MGP_CBAJ_P0027213 Ikzf4 protein_coding protein_coding MGP_CBAJ_T0027214.1 MGP_CBAJ_G0017607.1 mouse_genomes_project 10 142448856 142462220 - MGP_CBAJ_P0027214 Ikzf4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027215.1 MGP_CBAJ_G0017607.1 mouse_genomes_project 10 142450101 142461025 - MGP_CBAJ_P0027215 Ikzf4 protein_coding protein_coding MGP_CBAJ_T0027216.1 MGP_CBAJ_G0017607.1 mouse_genomes_project 10 142456637 142462172 - MGP_CBAJ_P0027216 Ikzf4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027217.1 MGP_CBAJ_G0017607.1 mouse_genomes_project 10 142457553 142462166 - MGP_CBAJ_P0027217 Ikzf4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027218.1 MGP_CBAJ_G0017607.1 mouse_genomes_project 10 142457579 142462183 - MGP_CBAJ_P0027218 Ikzf4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027219.1 MGP_CBAJ_G0017607.1 mouse_genomes_project 10 142460814 142462202 - Ikzf4 protein_coding processed_transcript MGP_CBAJ_T0025906.1 MGP_CBAJ_G0017226.1 mouse_genomes_project 10 86885109 86887971 - MGP_CBAJ_P0025906 Gamt protein_coding protein_coding MGP_CBAJ_T0025907.1 MGP_CBAJ_G0017226.1 mouse_genomes_project 10 86885122 86887927 - MGP_CBAJ_P0025907 Gamt protein_coding protein_coding MGP_CBAJ_T0025908.1 MGP_CBAJ_G0017226.1 mouse_genomes_project 10 86885535 86887877 - Gamt protein_coding retained_intron MGP_CBAJ_T0025909.1 MGP_CBAJ_G0017226.1 mouse_genomes_project 10 86885751 86886248 - Gamt protein_coding retained_intron MGP_CBAJ_T0024501.1 MGP_CBAJ_G0016828.1 mouse_genomes_project 10 24533131 24602309 - MGP_CBAJ_P0024501 Enpp3 protein_coding protein_coding MGP_CBAJ_T0009469.1 MGP_CBAJ_G0007607.1 mouse_genomes_project 10 64892146 64892245 - Gm44308 miRNA miRNA MGP_CBAJ_T0025319.1 MGP_CBAJ_G0017070.1 mouse_genomes_project 10 75485753 75542037 + MGP_CBAJ_P0025319 Slc16a9 protein_coding protein_coding MGP_CBAJ_T0025320.1 MGP_CBAJ_G0017070.1 mouse_genomes_project 10 75516931 75540161 + Slc16a9 protein_coding retained_intron MGP_CBAJ_T0024432.1 MGP_CBAJ_G0016795.1 mouse_genomes_project 10 20826196 20857599 + MGP_CBAJ_P0024432 1700020N01Rik protein_coding protein_coding MGP_CBAJ_T0024433.1 MGP_CBAJ_G0016795.1 mouse_genomes_project 10 20849371 20856988 + 1700020N01Rik protein_coding processed_transcript MGP_CBAJ_T0027229.1 MGP_CBAJ_G0017614.1 mouse_genomes_project 10 142643017 142652889 + MGP_CBAJ_P0027229 Mmp19 protein_coding protein_coding MGP_CBAJ_T0024808.1 MGP_CBAJ_G0016928.1 mouse_genomes_project 10 45575631 45594934 - MGP_CBAJ_P0024808 1700021F05Rik protein_coding protein_coding MGP_CBAJ_T0024809.1 MGP_CBAJ_G0016928.1 mouse_genomes_project 10 45575643 45594908 - MGP_CBAJ_P0024809 1700021F05Rik protein_coding protein_coding MGP_CBAJ_T0024810.1 MGP_CBAJ_G0016928.1 mouse_genomes_project 10 45575669 45576354 - 1700021F05Rik protein_coding processed_transcript MGP_CBAJ_T0024811.1 MGP_CBAJ_G0016928.1 mouse_genomes_project 10 45587079 45594934 - 1700021F05Rik protein_coding processed_transcript MGP_CBAJ_T0027320.1 MGP_CBAJ_G0017673.1 mouse_genomes_project 10 144316637 144319861 - MGP_CBAJ_P0027320 protein_coding protein_coding MGP_CBAJ_T0024765.1 MGP_CBAJ_G0016917.1 mouse_genomes_project 10 44039158 44138742 - MGP_CBAJ_P0024765 Foxo3 protein_coding protein_coding MGP_CBAJ_T0024766.1 MGP_CBAJ_G0016917.1 mouse_genomes_project 10 44043100 44138732 - MGP_CBAJ_P0024766 Foxo3 protein_coding protein_coding MGP_CBAJ_T0024767.1 MGP_CBAJ_G0016917.1 mouse_genomes_project 10 44053582 44138686 - MGP_CBAJ_P0024767 Foxo3 protein_coding protein_coding MGP_CBAJ_T0024768.1 MGP_CBAJ_G0016917.1 mouse_genomes_project 10 44054887 44120360 - MGP_CBAJ_P0024768 Foxo3 protein_coding protein_coding MGP_CBAJ_T0024769.1 MGP_CBAJ_G0016917.1 mouse_genomes_project 10 44106925 44138745 - MGP_CBAJ_P0024769 Foxo3 protein_coding protein_coding MGP_CBAJ_T0098623.1 MGP_CBAJ_G0036878.1 mouse_genomes_project 10 51283056 51283140 - Gm24256 snRNA snRNA MGP_CBAJ_T0098658.1 MGP_CBAJ_G0036913.1 mouse_genomes_project 10 126511308 126511415 + Gm22070 snRNA snRNA MGP_CBAJ_T0002940.1 MGP_CBAJ_G0002754.1 mouse_genomes_project 10 9097061 9097761 - Gm16577 antisense antisense MGP_CBAJ_T0024487.1 MGP_CBAJ_G0016821.1 mouse_genomes_project 10 23737499 23739657 - MGP_CBAJ_P0024487 protein_coding protein_coding MGP_CBAJ_T0024591.1 MGP_CBAJ_G0016857.1 mouse_genomes_project 10 32101979 32229044 - MGP_CBAJ_P0024591 Rnf217 protein_coding protein_coding MGP_CBAJ_T0026650.1 MGP_CBAJ_G0017418.1 mouse_genomes_project 10 108489706 108590381 + MGP_CBAJ_P0026650 Poc1b protein_coding protein_coding MGP_CBAJ_T0026651.1 MGP_CBAJ_G0017418.1 mouse_genomes_project 10 108489752 108589445 + MGP_CBAJ_P0026651 Poc1b protein_coding protein_coding MGP_CBAJ_T0026652.1 MGP_CBAJ_G0017418.1 mouse_genomes_project 10 108489773 108590467 + MGP_CBAJ_P0026652 Poc1b protein_coding protein_coding MGP_CBAJ_T0026655.1 MGP_CBAJ_G0017418.1 mouse_genomes_project 10 108516599 108584499 + MGP_CBAJ_P0026655 Poc1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0026656.1 MGP_CBAJ_G0017418.1 mouse_genomes_project 10 108559800 108589421 + Poc1b protein_coding processed_transcript MGP_CBAJ_T0026657.1 MGP_CBAJ_G0017418.1 mouse_genomes_project 10 108584601 108589243 + Poc1b protein_coding processed_transcript MGP_CBAJ_T0025264.1 MGP_CBAJ_G0017067.1 mouse_genomes_project 10 74438176 74455369 - MGP_CBAJ_P0025264 Cdk1 protein_coding protein_coding MGP_CBAJ_T0025265.1 MGP_CBAJ_G0017067.1 mouse_genomes_project 10 74439865 74455334 - MGP_CBAJ_P0025265 Cdk1 protein_coding protein_coding MGP_CBAJ_T0025266.1 MGP_CBAJ_G0017067.1 mouse_genomes_project 10 74442138 74444269 - Cdk1 protein_coding retained_intron MGP_CBAJ_T0025267.1 MGP_CBAJ_G0017067.1 mouse_genomes_project 10 74442269 74447050 - Cdk1 protein_coding retained_intron MGP_CBAJ_T0025268.1 MGP_CBAJ_G0017067.1 mouse_genomes_project 10 74442305 74453261 - MGP_CBAJ_P0025268 Cdk1 protein_coding protein_coding MGP_CBAJ_T0025269.1 MGP_CBAJ_G0017067.1 mouse_genomes_project 10 74442343 74446974 - Cdk1 protein_coding retained_intron MGP_CBAJ_T0025270.1 MGP_CBAJ_G0017067.1 mouse_genomes_project 10 74446544 74455341 - Cdk1 protein_coding retained_intron MGP_CBAJ_T0026731.1 MGP_CBAJ_G0017449.1 mouse_genomes_project 10 119067682 119616594 - MGP_CBAJ_P0026731 Syt1 protein_coding protein_coding MGP_CBAJ_T0026732.1 MGP_CBAJ_G0017449.1 mouse_genomes_project 10 119067686 119616601 - MGP_CBAJ_P0026732 Syt1 protein_coding protein_coding MGP_CBAJ_T0026733.1 MGP_CBAJ_G0017449.1 mouse_genomes_project 10 119201650 119210769 - Syt1 protein_coding retained_intron MGP_CBAJ_T0026734.1 MGP_CBAJ_G0017449.1 mouse_genomes_project 10 119201706 119614721 - MGP_CBAJ_P0026734 Syt1 protein_coding protein_coding MGP_CBAJ_T0026735.1 MGP_CBAJ_G0017449.1 mouse_genomes_project 10 119494445 119616581 - Syt1 protein_coding retained_intron MGP_CBAJ_T0026736.1 MGP_CBAJ_G0017449.1 mouse_genomes_project 10 119494662 119614710 - Syt1 protein_coding retained_intron MGP_CBAJ_T0025795.1 MGP_CBAJ_G0017203.1 mouse_genomes_project 10 86461951 86476108 - MGP_CBAJ_P0025795 Med16 protein_coding protein_coding MGP_CBAJ_T0025796.1 MGP_CBAJ_G0017203.1 mouse_genomes_project 10 86462162 86476085 - MGP_CBAJ_P0025796 Med16 protein_coding protein_coding MGP_CBAJ_T0025797.1 MGP_CBAJ_G0017203.1 mouse_genomes_project 10 86465422 86466872 - Med16 protein_coding retained_intron MGP_CBAJ_T0025798.1 MGP_CBAJ_G0017203.1 mouse_genomes_project 10 86469024 86476005 - Med16 protein_coding retained_intron MGP_CBAJ_T0025799.1 MGP_CBAJ_G0017203.1 mouse_genomes_project 10 86470365 86476097 - MGP_CBAJ_P0025799 Med16 protein_coding protein_coding MGP_CBAJ_T0025800.1 MGP_CBAJ_G0017203.1 mouse_genomes_project 10 86470541 86475508 - MGP_CBAJ_P0025800 Med16 protein_coding protein_coding MGP_CBAJ_T0025801.1 MGP_CBAJ_G0017203.1 mouse_genomes_project 10 86470568 86476110 - MGP_CBAJ_P0025801 Med16 protein_coding protein_coding MGP_CBAJ_T0026096.1 MGP_CBAJ_G0017280.1 mouse_genomes_project 10 88083066 88093184 + MGP_CBAJ_P0026096 Matk protein_coding protein_coding MGP_CBAJ_T0026097.1 MGP_CBAJ_G0017280.1 mouse_genomes_project 10 88087497 88093564 + MGP_CBAJ_P0026097 Matk protein_coding protein_coding MGP_CBAJ_T0026098.1 MGP_CBAJ_G0017280.1 mouse_genomes_project 10 88087497 88093564 + MGP_CBAJ_P0026098 Matk protein_coding nonsense_mediated_decay MGP_CBAJ_T0026099.1 MGP_CBAJ_G0017280.1 mouse_genomes_project 10 88087497 88093180 + MGP_CBAJ_P0026099 Matk protein_coding protein_coding MGP_CBAJ_T0026100.1 MGP_CBAJ_G0017280.1 mouse_genomes_project 10 88087503 88093180 + MGP_CBAJ_P0026100 Matk protein_coding protein_coding MGP_CBAJ_T0026101.1 MGP_CBAJ_G0017280.1 mouse_genomes_project 10 88087540 88093184 + Matk protein_coding retained_intron MGP_CBAJ_T0026102.1 MGP_CBAJ_G0017280.1 mouse_genomes_project 10 88087646 88090725 + Matk protein_coding retained_intron MGP_CBAJ_T0026103.1 MGP_CBAJ_G0017280.1 mouse_genomes_project 10 88088028 88089852 + MGP_CBAJ_P0026103 Matk protein_coding protein_coding MGP_CBAJ_T0026104.1 MGP_CBAJ_G0017280.1 mouse_genomes_project 10 88088116 88093174 + MGP_CBAJ_P0026104 Matk protein_coding protein_coding MGP_CBAJ_T0026105.1 MGP_CBAJ_G0017280.1 mouse_genomes_project 10 88088413 88093112 + Matk protein_coding retained_intron MGP_CBAJ_T0026106.1 MGP_CBAJ_G0017280.1 mouse_genomes_project 10 88091368 88092866 + Matk protein_coding retained_intron MGP_CBAJ_T0025635.1 MGP_CBAJ_G0017148.1 mouse_genomes_project 10 84253566 84279379 - MGP_CBAJ_P0025635 Pfkl protein_coding protein_coding MGP_CBAJ_T0025636.1 MGP_CBAJ_G0017148.1 mouse_genomes_project 10 84259963 84261677 - Pfkl protein_coding retained_intron MGP_CBAJ_T0025637.1 MGP_CBAJ_G0017148.1 mouse_genomes_project 10 84266793 84269510 - Pfkl protein_coding retained_intron MGP_CBAJ_T0025638.1 MGP_CBAJ_G0017148.1 mouse_genomes_project 10 84270255 84279655 - Pfkl protein_coding processed_transcript MGP_CBAJ_T0097892.1 MGP_CBAJ_G0036165.1 mouse_genomes_project 10 46870458 46870569 + Gm27977 rRNA rRNA MGP_CBAJ_T0027171.1 MGP_CBAJ_G0017592.1 mouse_genomes_project 10 142088085 142117786 + MGP_CBAJ_P0027171 Cs protein_coding protein_coding MGP_CBAJ_T0012284.1 MGP_CBAJ_G0010396.1 mouse_genomes_project 10 88383443 88383737 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0026326.1 MGP_CBAJ_G0017333.1 mouse_genomes_project 10 92625800 92634393 - MGP_CBAJ_P0026326 Mterf2 protein_coding protein_coding MGP_CBAJ_T0009511.1 MGP_CBAJ_G0007649.1 mouse_genomes_project 10 133018136 133018256 - Mir763 miRNA miRNA MGP_CBAJ_T0006055.1 MGP_CBAJ_G0005050.1 mouse_genomes_project 10 102564625 102569316 + 4930471D02Rik lincRNA lincRNA MGP_CBAJ_T0009529.1 MGP_CBAJ_G0007667.1 mouse_genomes_project 10 142381879 142381940 - Mir6917 miRNA miRNA MGP_CBAJ_T0025948.1 MGP_CBAJ_G0017235.1 mouse_genomes_project 10 87029575 87036740 - MGP_CBAJ_P0025948 Mex3d protein_coding protein_coding MGP_CBAJ_T0025949.1 MGP_CBAJ_G0017235.1 mouse_genomes_project 10 87029577 87036740 - MGP_CBAJ_P0025949 Mex3d protein_coding protein_coding MGP_CBAJ_T0025950.1 MGP_CBAJ_G0017235.1 mouse_genomes_project 10 87029674 87031208 - MGP_CBAJ_P0025950 Mex3d protein_coding protein_coding MGP_CBAJ_T0024696.1 MGP_CBAJ_G0016898.1 mouse_genomes_project 10 42209531 42246443 + MGP_CBAJ_P0024696 Slc22a16 protein_coding protein_coding MGP_CBAJ_T0024697.1 MGP_CBAJ_G0016898.1 mouse_genomes_project 10 42209808 42246439 + MGP_CBAJ_P0024697 Slc22a16 protein_coding protein_coding MGP_CBAJ_T0002978.1 MGP_CBAJ_G0002785.1 mouse_genomes_project 10 82327435 82329131 + Gm16240 antisense antisense MGP_CBAJ_T0026190.1 MGP_CBAJ_G0017301.1 mouse_genomes_project 10 88472876 88488782 + Tle2 protein_coding retained_intron MGP_CBAJ_T0026191.1 MGP_CBAJ_G0017301.1 mouse_genomes_project 10 88473049 88474148 + MGP_CBAJ_P0026191 Tle2 protein_coding protein_coding MGP_CBAJ_T0026192.1 MGP_CBAJ_G0017301.1 mouse_genomes_project 10 88473054 88478641 + MGP_CBAJ_P0026192 Tle2 protein_coding protein_coding MGP_CBAJ_T0026193.1 MGP_CBAJ_G0017301.1 mouse_genomes_project 10 88473575 88488786 + Tle2 protein_coding retained_intron MGP_CBAJ_T0026194.1 MGP_CBAJ_G0017301.1 mouse_genomes_project 10 88473577 88488789 + MGP_CBAJ_P0026194 Tle2 protein_coding protein_coding MGP_CBAJ_T0026195.1 MGP_CBAJ_G0017301.1 mouse_genomes_project 10 88473646 88488789 + MGP_CBAJ_P0026195 Tle2 protein_coding protein_coding MGP_CBAJ_T0026196.1 MGP_CBAJ_G0017301.1 mouse_genomes_project 10 88473732 88488784 + Tle2 protein_coding retained_intron MGP_CBAJ_T0026197.1 MGP_CBAJ_G0017301.1 mouse_genomes_project 10 88473814 88478951 + MGP_CBAJ_P0026197 Tle2 protein_coding protein_coding MGP_CBAJ_T0026198.1 MGP_CBAJ_G0017301.1 mouse_genomes_project 10 88473847 88489161 + MGP_CBAJ_P0026198 Tle2 protein_coding protein_coding MGP_CBAJ_T0026199.1 MGP_CBAJ_G0017301.1 mouse_genomes_project 10 88479149 88485243 + Tle2 protein_coding retained_intron MGP_CBAJ_T0026200.1 MGP_CBAJ_G0017301.1 mouse_genomes_project 10 88480858 88485200 + Tle2 protein_coding retained_intron MGP_CBAJ_T0026201.1 MGP_CBAJ_G0017301.1 mouse_genomes_project 10 88485407 88486262 + Tle2 protein_coding retained_intron MGP_CBAJ_T0026202.1 MGP_CBAJ_G0017301.1 mouse_genomes_project 10 88485741 88488739 + Tle2 protein_coding retained_intron MGP_CBAJ_T0026203.1 MGP_CBAJ_G0017301.1 mouse_genomes_project 10 88486284 88488789 + MGP_CBAJ_P0026203 Tle2 protein_coding protein_coding MGP_CBAJ_T0026204.1 MGP_CBAJ_G0017301.1 mouse_genomes_project 10 88486314 88488789 + MGP_CBAJ_P0026204 Tle2 protein_coding protein_coding MGP_CBAJ_T0026205.1 MGP_CBAJ_G0017301.1 mouse_genomes_project 10 88486956 88488617 + Tle2 protein_coding retained_intron MGP_CBAJ_T0097745.1 MGP_CBAJ_G0036018.1 mouse_genomes_project 10 46123964 46124512 + pseudogene pseudogene MGP_CBAJ_T0027136.1 MGP_CBAJ_G0017581.1 mouse_genomes_project 10 141822518 141888635 - MGP_CBAJ_P0027136 Rbms2 protein_coding protein_coding MGP_CBAJ_T0025639.1 MGP_CBAJ_G0017149.1 mouse_genomes_project 10 84299787 84317305 - MGP_CBAJ_P0025639 Aire protein_coding protein_coding MGP_CBAJ_T0025640.1 MGP_CBAJ_G0017149.1 mouse_genomes_project 10 84299787 84317305 - MGP_CBAJ_P0025640 Aire protein_coding protein_coding MGP_CBAJ_T0025641.1 MGP_CBAJ_G0017149.1 mouse_genomes_project 10 84299787 84317305 - MGP_CBAJ_P0025641 Aire protein_coding protein_coding MGP_CBAJ_T0025642.1 MGP_CBAJ_G0017149.1 mouse_genomes_project 10 84299787 84317305 - MGP_CBAJ_P0025642 Aire protein_coding protein_coding MGP_CBAJ_T0025643.1 MGP_CBAJ_G0017149.1 mouse_genomes_project 10 84299827 84317305 - MGP_CBAJ_P0025643 Aire protein_coding protein_coding MGP_CBAJ_T0025644.1 MGP_CBAJ_G0017149.1 mouse_genomes_project 10 84302517 84315442 - Aire protein_coding retained_intron MGP_CBAJ_T0027258.1 MGP_CBAJ_G0017629.1 mouse_genomes_project 10 143069012 143074209 - MGP_CBAJ_P0027258 Olfr770 protein_coding protein_coding MGP_CBAJ_T0027259.1 MGP_CBAJ_G0017629.1 mouse_genomes_project 10 143069012 143069948 - MGP_CBAJ_P0027259 Olfr770 protein_coding protein_coding MGP_CBAJ_T0027260.1 MGP_CBAJ_G0017629.1 mouse_genomes_project 10 143069558 143074951 - MGP_CBAJ_P0027260 Olfr770 protein_coding protein_coding MGP_CBAJ_T0027261.1 MGP_CBAJ_G0017629.1 mouse_genomes_project 10 143069625 143074955 - MGP_CBAJ_P0027261 Olfr770 protein_coding protein_coding MGP_CBAJ_T0003031.1 MGP_CBAJ_G0002822.1 mouse_genomes_project 10 132945623 132948889 + 9230105E05Rik antisense antisense MGP_CBAJ_T0009500.1 MGP_CBAJ_G0007638.1 mouse_genomes_project 10 102650291 102650387 - Mir331 miRNA miRNA MGP_CBAJ_T0026654.1 MGP_CBAJ_G0017420.1 mouse_genomes_project 10 108512279 108513438 - MGP_CBAJ_P0026654 Phxr2 protein_coding protein_coding MGP_CBAJ_T0000796.1 MGP_CBAJ_G0000732.1 mouse_genomes_project 10 122846586 122846884 + TEC TEC MGP_CBAJ_T0002970.1 MGP_CBAJ_G0002777.1 mouse_genomes_project 10 67254644 67256509 - antisense antisense MGP_CBAJ_T0025992.1 MGP_CBAJ_G0017246.1 mouse_genomes_project 10 87325693 87344188 + MGP_CBAJ_P0025992 Csnk1g2 protein_coding protein_coding MGP_CBAJ_T0025993.1 MGP_CBAJ_G0017246.1 mouse_genomes_project 10 87333068 87344188 + MGP_CBAJ_P0025993 Csnk1g2 protein_coding protein_coding MGP_CBAJ_T0012279.1 MGP_CBAJ_G0010391.1 mouse_genomes_project 10 80680834 80681266 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0026963.1 MGP_CBAJ_G0017526.1 mouse_genomes_project 10 138482968 138595627 - MGP_CBAJ_P0026963 Slc16a7 protein_coding protein_coding MGP_CBAJ_T0026964.1 MGP_CBAJ_G0017526.1 mouse_genomes_project 10 138483998 138568959 - MGP_CBAJ_P0026964 Slc16a7 protein_coding protein_coding MGP_CBAJ_T0024858.1 MGP_CBAJ_G0016949.1 mouse_genomes_project 10 54608190 54628755 - MGP_CBAJ_P0024858 Gprc6a protein_coding protein_coding MGP_CBAJ_T0098648.1 MGP_CBAJ_G0036903.1 mouse_genomes_project 10 102893484 102893566 - Gm26122 snRNA snRNA MGP_CBAJ_T0026790.1 MGP_CBAJ_G0017472.1 mouse_genomes_project 10 127034437 127196377 - MGP_CBAJ_P0026790 Lgr5 protein_coding protein_coding MGP_CBAJ_T0026791.1 MGP_CBAJ_G0017472.1 mouse_genomes_project 10 127036140 127196090 - MGP_CBAJ_P0026791 Lgr5 protein_coding protein_coding MGP_CBAJ_T0026792.1 MGP_CBAJ_G0017472.1 mouse_genomes_project 10 127036140 127196090 - MGP_CBAJ_P0026792 Lgr5 protein_coding protein_coding MGP_CBAJ_T0026793.1 MGP_CBAJ_G0017472.1 mouse_genomes_project 10 127040774 127043126 - Lgr5 protein_coding retained_intron MGP_CBAJ_T0026794.1 MGP_CBAJ_G0017472.1 mouse_genomes_project 10 127041971 127049018 - Lgr5 protein_coding retained_intron MGP_CBAJ_T0026795.1 MGP_CBAJ_G0017472.1 mouse_genomes_project 10 127048611 127196356 - Lgr5 protein_coding retained_intron MGP_CBAJ_T0026796.1 MGP_CBAJ_G0017472.1 mouse_genomes_project 10 127059336 127196356 - Lgr5 protein_coding retained_intron MGP_CBAJ_T0026797.1 MGP_CBAJ_G0017472.1 mouse_genomes_project 10 127120833 127196340 - Lgr5 protein_coding processed_transcript MGP_CBAJ_T0024370.1 MGP_CBAJ_G0016776.1 mouse_genomes_project 10 17892787 17907283 - MGP_CBAJ_P0024370 Tnfaip3 protein_coding protein_coding MGP_CBAJ_T0024371.1 MGP_CBAJ_G0016776.1 mouse_genomes_project 10 17892790 17903840 - MGP_CBAJ_P0024371 Tnfaip3 protein_coding protein_coding MGP_CBAJ_T0024372.1 MGP_CBAJ_G0016776.1 mouse_genomes_project 10 17892806 17907249 - Tnfaip3 protein_coding retained_intron MGP_CBAJ_T0024373.1 MGP_CBAJ_G0016776.1 mouse_genomes_project 10 17899144 17900719 - Tnfaip3 protein_coding retained_intron MGP_CBAJ_T0024374.1 MGP_CBAJ_G0016776.1 mouse_genomes_project 10 17900139 17907530 - MGP_CBAJ_P0024374 Tnfaip3 protein_coding protein_coding MGP_CBAJ_T0024375.1 MGP_CBAJ_G0016776.1 mouse_genomes_project 10 17903392 17906451 - MGP_CBAJ_P0024375 Tnfaip3 protein_coding protein_coding MGP_CBAJ_T0016867.1 MGP_CBAJ_G0014876.1 mouse_genomes_project 10 75436782 75449660 + Mrln processed_transcript lincRNA MGP_CBAJ_T0016868.1 MGP_CBAJ_G0014876.1 mouse_genomes_project 10 75436785 75454089 + Mrln processed_transcript lincRNA MGP_CBAJ_T0016869.1 MGP_CBAJ_G0014876.1 mouse_genomes_project 10 75436828 75453958 + Mrln processed_transcript lincRNA MGP_CBAJ_T0016870.1 MGP_CBAJ_G0014876.1 mouse_genomes_project 10 75436843 75443110 + Mrln processed_transcript lincRNA MGP_CBAJ_T0016871.1 MGP_CBAJ_G0014876.1 mouse_genomes_project 10 75451271 75454088 + Mrln processed_transcript retained_intron MGP_CBAJ_T0024246.1 MGP_CBAJ_G0016745.1 mouse_genomes_project 10 9029622 9070359 + MGP_CBAJ_P0024246 Shprh protein_coding nonsense_mediated_decay MGP_CBAJ_T0024247.1 MGP_CBAJ_G0016745.1 mouse_genomes_project 10 9029625 9102377 + MGP_CBAJ_P0024247 Shprh protein_coding protein_coding MGP_CBAJ_T0024248.1 MGP_CBAJ_G0016745.1 mouse_genomes_project 10 9029668 9034722 + Shprh protein_coding retained_intron MGP_CBAJ_T0024249.1 MGP_CBAJ_G0016745.1 mouse_genomes_project 10 9029719 9094334 + MGP_CBAJ_P0024249 Shprh protein_coding protein_coding MGP_CBAJ_T0024250.1 MGP_CBAJ_G0016745.1 mouse_genomes_project 10 9029719 9094334 + MGP_CBAJ_P0024250 Shprh protein_coding protein_coding MGP_CBAJ_T0024251.1 MGP_CBAJ_G0016745.1 mouse_genomes_project 10 9046652 9052371 + MGP_CBAJ_P0024251 Shprh protein_coding nonsense_mediated_decay MGP_CBAJ_T0024252.1 MGP_CBAJ_G0016745.1 mouse_genomes_project 10 9048764 9099079 + Shprh protein_coding retained_intron MGP_CBAJ_T0024253.1 MGP_CBAJ_G0016745.1 mouse_genomes_project 10 9089631 9094393 + Shprh protein_coding retained_intron MGP_CBAJ_T0099893.1 MGP_CBAJ_G0038148.1 mouse_genomes_project 10 143692523 143692647 + Gm24717 snoRNA snoRNA MGP_CBAJ_T0026329.1 MGP_CBAJ_G0017336.1 mouse_genomes_project 10 92921336 93202239 + MGP_CBAJ_P0026329 Btbd11 protein_coding protein_coding MGP_CBAJ_T0026330.1 MGP_CBAJ_G0017336.1 mouse_genomes_project 10 92921349 93182513 + MGP_CBAJ_P0026330 Btbd11 protein_coding protein_coding MGP_CBAJ_T0026331.1 MGP_CBAJ_G0017336.1 mouse_genomes_project 10 93138893 93202239 + MGP_CBAJ_P0026331 Btbd11 protein_coding protein_coding MGP_CBAJ_T0026332.1 MGP_CBAJ_G0017336.1 mouse_genomes_project 10 93138903 93146520 + Btbd11 protein_coding processed_transcript MGP_CBAJ_T0026333.1 MGP_CBAJ_G0017336.1 mouse_genomes_project 10 93171601 93183552 + Btbd11 protein_coding retained_intron MGP_CBAJ_T0026334.1 MGP_CBAJ_G0017336.1 mouse_genomes_project 10 93181491 93202236 + Btbd11 protein_coding processed_transcript MGP_CBAJ_T0026335.1 MGP_CBAJ_G0017336.1 mouse_genomes_project 10 93187133 93202239 + Btbd11 protein_coding retained_intron MGP_CBAJ_T0026336.1 MGP_CBAJ_G0017336.1 mouse_genomes_project 10 93196107 93200207 + Btbd11 protein_coding retained_intron MGP_CBAJ_T0024496.1 MGP_CBAJ_G0016827.1 mouse_genomes_project 10 24366901 24440544 - MGP_CBAJ_P0024496 Enpp1 protein_coding protein_coding MGP_CBAJ_T0024497.1 MGP_CBAJ_G0016827.1 mouse_genomes_project 10 24370422 24440545 - MGP_CBAJ_P0024497 Enpp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024498.1 MGP_CBAJ_G0016827.1 mouse_genomes_project 10 24370793 24440377 - MGP_CBAJ_P0024498 Enpp1 protein_coding protein_coding MGP_CBAJ_T0024499.1 MGP_CBAJ_G0016827.1 mouse_genomes_project 10 24376802 24440383 - Enpp1 protein_coding retained_intron MGP_CBAJ_T0024500.1 MGP_CBAJ_G0016827.1 mouse_genomes_project 10 24400076 24405849 - Enpp1 protein_coding retained_intron MGP_CBAJ_T0009484.1 MGP_CBAJ_G0007622.1 mouse_genomes_project 10 87031522 87031605 + Gm22721 miRNA miRNA MGP_CBAJ_T0026324.1 MGP_CBAJ_G0017331.1 mouse_genomes_project 10 92601674 92607151 - MGP_CBAJ_P0026324 Fhl4 protein_coding protein_coding MGP_CBAJ_T0027321.1 MGP_CBAJ_G0017674.1 mouse_genomes_project 10 144338303 144342091 - MGP_CBAJ_P0027321 protein_coding protein_coding MGP_CBAJ_T0026555.1 MGP_CBAJ_G0017385.1 mouse_genomes_project 10 102101346 102137355 + MGP_CBAJ_P0026555 Hal protein_coding protein_coding MGP_CBAJ_T0026556.1 MGP_CBAJ_G0017385.1 mouse_genomes_project 10 102101381 102134531 + MGP_CBAJ_P0026556 Hal protein_coding nonsense_mediated_decay MGP_CBAJ_T0026557.1 MGP_CBAJ_G0017385.1 mouse_genomes_project 10 102112046 102116220 + Hal protein_coding retained_intron MGP_CBAJ_T0026558.1 MGP_CBAJ_G0017385.1 mouse_genomes_project 10 102116687 102134785 + Hal protein_coding processed_transcript MGP_CBAJ_T0024946.1 MGP_CBAJ_G0016982.1 mouse_genomes_project 10 61949953 62029765 - MGP_CBAJ_P0024946 Edar protein_coding protein_coding MGP_CBAJ_T0027277.1 MGP_CBAJ_G0017641.1 mouse_genomes_project 10 143430437 143431373 + MGP_CBAJ_P0027277 Olfr788 protein_coding protein_coding MGP_CBAJ_T0024562.1 MGP_CBAJ_G0016845.1 mouse_genomes_project 10 29559493 29577836 + MGP_CBAJ_P0024562 9330159F19Rik protein_coding protein_coding MGP_CBAJ_T0027301.1 MGP_CBAJ_G0017658.1 mouse_genomes_project 10 143785309 143789369 + MGP_CBAJ_P0027301 protein_coding protein_coding MGP_CBAJ_T0026623.1 MGP_CBAJ_G0017401.1 mouse_genomes_project 10 104032492 104211266 - MGP_CBAJ_P0026623 Cradd protein_coding protein_coding MGP_CBAJ_T0025609.1 MGP_CBAJ_G0017138.1 mouse_genomes_project 10 83909052 83909415 + MGP_CBAJ_P0025609 Gm10142 protein_coding protein_coding MGP_CBAJ_T0012257.1 MGP_CBAJ_G0010369.1 mouse_genomes_project 10 40908452 40908831 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0025702.1 MGP_CBAJ_G0017180.1 mouse_genomes_project 10 86062020 86080228 - MGP_CBAJ_P0025702 Mier2 protein_coding protein_coding MGP_CBAJ_T0025703.1 MGP_CBAJ_G0017180.1 mouse_genomes_project 10 86062020 86080336 - MGP_CBAJ_P0025703 Mier2 protein_coding protein_coding MGP_CBAJ_T0025704.1 MGP_CBAJ_G0017180.1 mouse_genomes_project 10 86062021 86063736 - MGP_CBAJ_P0025704 Mier2 protein_coding protein_coding MGP_CBAJ_T0025705.1 MGP_CBAJ_G0017180.1 mouse_genomes_project 10 86062696 86063941 - Mier2 protein_coding retained_intron MGP_CBAJ_T0025706.1 MGP_CBAJ_G0017180.1 mouse_genomes_project 10 86063443 86066546 - Mier2 protein_coding retained_intron MGP_CBAJ_T0025707.1 MGP_CBAJ_G0017180.1 mouse_genomes_project 10 86064242 86066128 - Mier2 protein_coding processed_transcript MGP_CBAJ_T0025708.1 MGP_CBAJ_G0017180.1 mouse_genomes_project 10 86070577 86080251 - MGP_CBAJ_P0025708 Mier2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025709.1 MGP_CBAJ_G0017180.1 mouse_genomes_project 10 86070649 86080021 - MGP_CBAJ_P0025709 Mier2 protein_coding protein_coding MGP_CBAJ_T0025710.1 MGP_CBAJ_G0017180.1 mouse_genomes_project 10 86070656 86080258 - MGP_CBAJ_P0025710 Mier2 protein_coding protein_coding MGP_CBAJ_T0025711.1 MGP_CBAJ_G0017180.1 mouse_genomes_project 10 86070681 86072585 - MGP_CBAJ_P0025711 Mier2 protein_coding protein_coding MGP_CBAJ_T0025712.1 MGP_CBAJ_G0017180.1 mouse_genomes_project 10 86071333 86080214 - MGP_CBAJ_P0025712 Mier2 protein_coding protein_coding MGP_CBAJ_T0025713.1 MGP_CBAJ_G0017180.1 mouse_genomes_project 10 86071411 86079742 - MGP_CBAJ_P0025713 Mier2 protein_coding protein_coding MGP_CBAJ_T0024604.1 MGP_CBAJ_G0016864.1 mouse_genomes_project 10 34777694 34809495 - MGP_CBAJ_P0024604 Zufsp protein_coding unknown_likely_coding MGP_CBAJ_T0024605.1 MGP_CBAJ_G0016864.1 mouse_genomes_project 10 34785187 34809462 - MGP_CBAJ_P0024605 Zufsp protein_coding protein_coding MGP_CBAJ_T0098604.1 MGP_CBAJ_G0036859.1 mouse_genomes_project 10 7898535 7898699 + Gm25682 snRNA snRNA MGP_CBAJ_T0012256.1 MGP_CBAJ_G0010368.1 mouse_genomes_project 10 32266463 32267766 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0025973.1 MGP_CBAJ_G0017239.1 mouse_genomes_project 10 87155327 87189671 + MGP_CBAJ_P0025973 Onecut3 protein_coding protein_coding MGP_CBAJ_T0026724.1 MGP_CBAJ_G0017443.1 mouse_genomes_project 10 117893814 117897104 - MGP_CBAJ_P0026724 Myf5 protein_coding protein_coding MGP_CBAJ_T0025984.1 MGP_CBAJ_G0017243.1 mouse_genomes_project 10 87274373 87284493 - MGP_CBAJ_P0025984 Abhd17a protein_coding protein_coding MGP_CBAJ_T0025985.1 MGP_CBAJ_G0017243.1 mouse_genomes_project 10 87274374 87284476 - MGP_CBAJ_P0025985 Abhd17a protein_coding protein_coding MGP_CBAJ_T0025986.1 MGP_CBAJ_G0017243.1 mouse_genomes_project 10 87274375 87277344 - MGP_CBAJ_P0025986 Abhd17a protein_coding protein_coding MGP_CBAJ_T0025987.1 MGP_CBAJ_G0017243.1 mouse_genomes_project 10 87277398 87284467 - MGP_CBAJ_P0025987 Abhd17a protein_coding protein_coding MGP_CBAJ_T0027012.1 MGP_CBAJ_G0017543.1 mouse_genomes_project 10 140647776 140655687 - MGP_CBAJ_P0027012 Dtx3 protein_coding protein_coding MGP_CBAJ_T0027013.1 MGP_CBAJ_G0017543.1 mouse_genomes_project 10 140647776 140655687 - MGP_CBAJ_P0027013 Dtx3 protein_coding protein_coding MGP_CBAJ_T0027014.1 MGP_CBAJ_G0017543.1 mouse_genomes_project 10 140648040 140655705 - MGP_CBAJ_P0027014 Dtx3 protein_coding protein_coding MGP_CBAJ_T0027015.1 MGP_CBAJ_G0017543.1 mouse_genomes_project 10 140648223 140654444 - MGP_CBAJ_P0027015 Dtx3 protein_coding protein_coding MGP_CBAJ_T0027016.1 MGP_CBAJ_G0017543.1 mouse_genomes_project 10 140650401 140655706 - MGP_CBAJ_P0027016 Dtx3 protein_coding protein_coding MGP_CBAJ_T0027017.1 MGP_CBAJ_G0017543.1 mouse_genomes_project 10 140650930 140655697 - Dtx3 protein_coding retained_intron MGP_CBAJ_T0097746.1 MGP_CBAJ_G0036019.1 mouse_genomes_project 10 62194839 62195408 - pseudogene pseudogene MGP_CBAJ_T0024997.1 MGP_CBAJ_G0016998.1 mouse_genomes_project 10 63644926 63678676 + Spock2 protein_coding retained_intron MGP_CBAJ_T0024998.1 MGP_CBAJ_G0016998.1 mouse_genomes_project 10 63644926 63686507 + MGP_CBAJ_P0024998 Spock2 protein_coding protein_coding MGP_CBAJ_T0024999.1 MGP_CBAJ_G0016998.1 mouse_genomes_project 10 63645175 63686513 + MGP_CBAJ_P0024999 Spock2 protein_coding unknown_likely_coding MGP_CBAJ_T0025000.1 MGP_CBAJ_G0016998.1 mouse_genomes_project 10 63645175 63685217 + MGP_CBAJ_P0025000 Spock2 protein_coding protein_coding MGP_CBAJ_T0009520.1 MGP_CBAJ_G0007658.1 mouse_genomes_project 10 140414641 140414762 + Mir546 miRNA miRNA MGP_CBAJ_T0026450.1 MGP_CBAJ_G0017367.1 mouse_genomes_project 10 96895613 96941014 + MGP_CBAJ_P0026450 Slc5a8 protein_coding protein_coding MGP_CBAJ_T0009468.1 MGP_CBAJ_G0007606.1 mouse_genomes_project 10 64681084 64681206 + Mir466j miRNA miRNA MGP_CBAJ_T0026266.1 MGP_CBAJ_G0017314.1 mouse_genomes_project 10 89926349 89942496 + Hcfc2 protein_coding processed_transcript MGP_CBAJ_T0026267.1 MGP_CBAJ_G0017314.1 mouse_genomes_project 10 89932445 89975147 + MGP_CBAJ_P0026267 Hcfc2 protein_coding protein_coding MGP_CBAJ_T0026268.1 MGP_CBAJ_G0017314.1 mouse_genomes_project 10 89932649 89945669 + MGP_CBAJ_P0026268 Hcfc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026269.1 MGP_CBAJ_G0017314.1 mouse_genomes_project 10 89961466 89974129 + MGP_CBAJ_P0026269 Hcfc2 protein_coding protein_coding MGP_CBAJ_T0025522.1 MGP_CBAJ_G0017118.1 mouse_genomes_project 10 82601600 82605581 + Lss protein_coding processed_transcript MGP_CBAJ_T0025523.1 MGP_CBAJ_G0017118.1 mouse_genomes_project 10 82601619 82618884 + Lss protein_coding retained_intron MGP_CBAJ_T0025524.1 MGP_CBAJ_G0017118.1 mouse_genomes_project 10 82601619 82625495 + MGP_CBAJ_P0025524 Lss protein_coding protein_coding MGP_CBAJ_T0025525.1 MGP_CBAJ_G0017118.1 mouse_genomes_project 10 82601624 82627154 + Lss protein_coding retained_intron MGP_CBAJ_T0025526.1 MGP_CBAJ_G0017118.1 mouse_genomes_project 10 82601694 82605736 + Lss protein_coding retained_intron MGP_CBAJ_T0025527.1 MGP_CBAJ_G0017118.1 mouse_genomes_project 10 82611897 82612762 + MGP_CBAJ_P0025527 Lss protein_coding protein_coding MGP_CBAJ_T0025528.1 MGP_CBAJ_G0017118.1 mouse_genomes_project 10 82621225 82626634 + Lss protein_coding retained_intron MGP_CBAJ_T0025529.1 MGP_CBAJ_G0017118.1 mouse_genomes_project 10 82622286 82623249 + Lss protein_coding retained_intron MGP_CBAJ_T0012287.1 MGP_CBAJ_G0010399.1 mouse_genomes_project 10 94747146 94747555 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003018.1 MGP_CBAJ_G0002814.1 mouse_genomes_project 10 126250341 126277699 + 4930473D10Rik antisense antisense MGP_CBAJ_T0025213.1 MGP_CBAJ_G0017054.1 mouse_genomes_project 10 71781994 71901157 - MGP_CBAJ_P0025213 Reep3 protein_coding protein_coding MGP_CBAJ_T0025214.1 MGP_CBAJ_G0017054.1 mouse_genomes_project 10 71810950 71900990 - MGP_CBAJ_P0025214 Reep3 protein_coding unknown_likely_coding MGP_CBAJ_T0024446.1 MGP_CBAJ_G0016797.1 mouse_genomes_project 10 21342899 21344006 - MGP_CBAJ_P0024446 4930444G20Rik protein_coding protein_coding MGP_CBAJ_T0025937.1 MGP_CBAJ_G0017233.1 mouse_genomes_project 10 86976119 86977057 - Adamtsl5 protein_coding processed_transcript MGP_CBAJ_T0025938.1 MGP_CBAJ_G0017233.1 mouse_genomes_project 10 86976764 86991449 - Adamtsl5 protein_coding retained_intron MGP_CBAJ_T0025939.1 MGP_CBAJ_G0017233.1 mouse_genomes_project 10 86976792 86983110 - Adamtsl5 protein_coding retained_intron MGP_CBAJ_T0025940.1 MGP_CBAJ_G0017233.1 mouse_genomes_project 10 86977812 86991449 - Adamtsl5 protein_coding retained_intron MGP_CBAJ_T0025941.1 MGP_CBAJ_G0017233.1 mouse_genomes_project 10 86977812 86991449 - MGP_CBAJ_P0025941 Adamtsl5 protein_coding protein_coding MGP_CBAJ_T0025942.1 MGP_CBAJ_G0017233.1 mouse_genomes_project 10 86979710 86991449 - MGP_CBAJ_P0025942 Adamtsl5 protein_coding protein_coding MGP_CBAJ_T0025943.1 MGP_CBAJ_G0017233.1 mouse_genomes_project 10 86979977 86982229 - Adamtsl5 protein_coding processed_transcript MGP_CBAJ_T0024575.1 MGP_CBAJ_G0016851.1 mouse_genomes_project 10 31092332 31102521 - MGP_CBAJ_P0024575 Hint3 protein_coding protein_coding MGP_CBAJ_T0024576.1 MGP_CBAJ_G0016851.1 mouse_genomes_project 10 31092540 31102375 - MGP_CBAJ_P0024576 Hint3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024577.1 MGP_CBAJ_G0016851.1 mouse_genomes_project 10 31092574 31102379 - MGP_CBAJ_P0024577 Hint3 protein_coding protein_coding MGP_CBAJ_T0006027.1 MGP_CBAJ_G0005036.1 mouse_genomes_project 10 87269377 87271408 + Gm26710 lincRNA lincRNA MGP_CBAJ_T0024857.1 MGP_CBAJ_G0016948.1 mouse_genomes_project 10 54583817 54588878 - MGP_CBAJ_P0024857 Fam162b protein_coding protein_coding MGP_CBAJ_T0009473.1 MGP_CBAJ_G0007611.1 mouse_genomes_project 10 81989136 81989228 + Mir6409 miRNA miRNA MGP_CBAJ_T0006030.1 MGP_CBAJ_G0005039.1 mouse_genomes_project 10 90046726 90066807 + lincRNA lincRNA MGP_CBAJ_T0024073.1 MGP_CBAJ_G0016706.1 mouse_genomes_project 10 457396 474923 + MGP_CBAJ_P0024073 Iyd protein_coding protein_coding MGP_CBAJ_T0024074.1 MGP_CBAJ_G0016706.1 mouse_genomes_project 10 457444 472156 + Iyd protein_coding retained_intron MGP_CBAJ_T0025151.1 MGP_CBAJ_G0017035.1 mouse_genomes_project 10 66649949 66675431 - MGP_CBAJ_P0025151 Ddx21 protein_coding protein_coding MGP_CBAJ_T0027199.1 MGP_CBAJ_G0017603.1 mouse_genomes_project 10 142343637 142344829 - MGP_CBAJ_P0027199 protein_coding protein_coding MGP_CBAJ_T0027200.1 MGP_CBAJ_G0017603.1 mouse_genomes_project 10 142343637 142344677 - MGP_CBAJ_P0027200 protein_coding protein_coding MGP_CBAJ_T0027201.1 MGP_CBAJ_G0017603.1 mouse_genomes_project 10 142343637 142344686 - MGP_CBAJ_P0027201 protein_coding protein_coding MGP_CBAJ_T0027202.1 MGP_CBAJ_G0017603.1 mouse_genomes_project 10 142343640 142344662 - protein_coding retained_intron MGP_CBAJ_T0027203.1 MGP_CBAJ_G0017603.1 mouse_genomes_project 10 142343643 142344626 - MGP_CBAJ_P0027203 protein_coding protein_coding MGP_CBAJ_T0027204.1 MGP_CBAJ_G0017603.1 mouse_genomes_project 10 142343644 142344683 - protein_coding retained_intron MGP_CBAJ_T0027205.1 MGP_CBAJ_G0017603.1 mouse_genomes_project 10 142343999 142344636 - protein_coding retained_intron MGP_CBAJ_T0011149.1 MGP_CBAJ_G0009287.1 mouse_genomes_project 10 81354069 81354392 + Gm25545 misc_RNA misc_RNA MGP_CBAJ_T0026083.1 MGP_CBAJ_G0017275.1 mouse_genomes_project 10 87984899 87987505 - MGP_CBAJ_P0026083 4930442H23Rik protein_coding protein_coding MGP_CBAJ_T0026278.1 MGP_CBAJ_G0017317.1 mouse_genomes_project 10 90208705 90211914 + MGP_CBAJ_P0026278 Gm4799 protein_coding protein_coding MGP_CBAJ_T0026013.1 MGP_CBAJ_G0017253.1 mouse_genomes_project 10 87520506 87523036 - MGP_CBAJ_P0026013 Plekhj1 protein_coding protein_coding MGP_CBAJ_T0027003.1 MGP_CBAJ_G0017538.1 mouse_genomes_project 10 140505034 140521981 + MGP_CBAJ_P0027003 Agap2 protein_coding protein_coding MGP_CBAJ_T0097744.1 MGP_CBAJ_G0036017.1 mouse_genomes_project 10 16777143 16777380 + pseudogene pseudogene MGP_CBAJ_T0098605.1 MGP_CBAJ_G0036860.1 mouse_genomes_project 10 10347865 10348030 + Gm23680 snRNA snRNA MGP_CBAJ_T0009504.1 MGP_CBAJ_G0007642.1 mouse_genomes_project 10 106602415 106602500 + Mir3966 miRNA miRNA MGP_CBAJ_T0024835.1 MGP_CBAJ_G0016942.1 mouse_genomes_project 10 47877068 48034569 + MGP_CBAJ_P0024835 Hace1 protein_coding protein_coding MGP_CBAJ_T0024836.1 MGP_CBAJ_G0016942.1 mouse_genomes_project 10 47877380 47913783 + MGP_CBAJ_P0024836 Hace1 protein_coding protein_coding MGP_CBAJ_T0024837.1 MGP_CBAJ_G0016942.1 mouse_genomes_project 10 47877513 47913737 + Hace1 protein_coding processed_transcript MGP_CBAJ_T0024838.1 MGP_CBAJ_G0016942.1 mouse_genomes_project 10 47886086 47963788 + Hace1 protein_coding processed_transcript MGP_CBAJ_T0024839.1 MGP_CBAJ_G0016942.1 mouse_genomes_project 10 47993398 48034383 + MGP_CBAJ_P0024839 Hace1 protein_coding protein_coding MGP_CBAJ_T0024840.1 MGP_CBAJ_G0016942.1 mouse_genomes_project 10 47994442 48034383 + MGP_CBAJ_P0024840 Hace1 protein_coding protein_coding MGP_CBAJ_T0024841.1 MGP_CBAJ_G0016942.1 mouse_genomes_project 10 47999001 48034495 + Hace1 protein_coding retained_intron MGP_CBAJ_T0024529.1 MGP_CBAJ_G0016836.1 mouse_genomes_project 10 26218837 26262847 + MGP_CBAJ_P0024529 Samd3 protein_coding protein_coding MGP_CBAJ_T0024530.1 MGP_CBAJ_G0016836.1 mouse_genomes_project 10 26218837 26249615 + MGP_CBAJ_P0024530 Samd3 protein_coding protein_coding MGP_CBAJ_T0024464.1 MGP_CBAJ_G0016804.1 mouse_genomes_project 10 22614911 22872133 - MGP_CBAJ_P0024464 Eya4 protein_coding protein_coding MGP_CBAJ_T0024465.1 MGP_CBAJ_G0016804.1 mouse_genomes_project 10 22615506 22872125 - MGP_CBAJ_P0024465 Eya4 protein_coding protein_coding MGP_CBAJ_T0026926.1 MGP_CBAJ_G0017513.1 mouse_genomes_project 10 134103091 134139667 + MGP_CBAJ_P0026926 Gns protein_coding protein_coding MGP_CBAJ_T0025844.1 MGP_CBAJ_G0017217.1 mouse_genomes_project 10 86722949 86737572 + MGP_CBAJ_P0025844 Stk11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025845.1 MGP_CBAJ_G0017217.1 mouse_genomes_project 10 86722949 86737785 + MGP_CBAJ_P0025845 Stk11 protein_coding protein_coding MGP_CBAJ_T0025846.1 MGP_CBAJ_G0017217.1 mouse_genomes_project 10 86723493 86737573 + MGP_CBAJ_P0025846 Stk11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025847.1 MGP_CBAJ_G0017217.1 mouse_genomes_project 10 86723500 86724961 + Stk11 protein_coding processed_transcript MGP_CBAJ_T0025848.1 MGP_CBAJ_G0017217.1 mouse_genomes_project 10 86723764 86737581 + MGP_CBAJ_P0025848 Stk11 protein_coding protein_coding MGP_CBAJ_T0025849.1 MGP_CBAJ_G0017217.1 mouse_genomes_project 10 86731921 86737078 + Stk11 protein_coding retained_intron MGP_CBAJ_T0025850.1 MGP_CBAJ_G0017217.1 mouse_genomes_project 10 86732477 86733612 + Stk11 protein_coding retained_intron MGP_CBAJ_T0025851.1 MGP_CBAJ_G0017217.1 mouse_genomes_project 10 86733488 86735302 + Stk11 protein_coding retained_intron MGP_CBAJ_T0025852.1 MGP_CBAJ_G0017217.1 mouse_genomes_project 10 86733784 86737573 + MGP_CBAJ_P0025852 Stk11 protein_coding protein_coding MGP_CBAJ_T0026111.1 MGP_CBAJ_G0017284.1 mouse_genomes_project 10 88125851 88156048 + MGP_CBAJ_P0026111 Pip5k1c protein_coding protein_coding MGP_CBAJ_T0026112.1 MGP_CBAJ_G0017284.1 mouse_genomes_project 10 88125868 88154330 + MGP_CBAJ_P0026112 Pip5k1c protein_coding protein_coding MGP_CBAJ_T0026113.1 MGP_CBAJ_G0017284.1 mouse_genomes_project 10 88125876 88145206 + MGP_CBAJ_P0026113 Pip5k1c protein_coding nonsense_mediated_decay MGP_CBAJ_T0026114.1 MGP_CBAJ_G0017284.1 mouse_genomes_project 10 88125892 88156048 + MGP_CBAJ_P0026114 Pip5k1c protein_coding nonsense_mediated_decay MGP_CBAJ_T0026115.1 MGP_CBAJ_G0017284.1 mouse_genomes_project 10 88125893 88156049 + MGP_CBAJ_P0026115 Pip5k1c protein_coding protein_coding MGP_CBAJ_T0026116.1 MGP_CBAJ_G0017284.1 mouse_genomes_project 10 88146763 88149516 + MGP_CBAJ_P0026116 Pip5k1c protein_coding protein_coding MGP_CBAJ_T0026117.1 MGP_CBAJ_G0017284.1 mouse_genomes_project 10 88149438 88154221 + MGP_CBAJ_P0026117 Pip5k1c protein_coding nonsense_mediated_decay MGP_CBAJ_T0026118.1 MGP_CBAJ_G0017284.1 mouse_genomes_project 10 88149573 88154096 + MGP_CBAJ_P0026118 Pip5k1c protein_coding nonsense_mediated_decay MGP_CBAJ_T0026119.1 MGP_CBAJ_G0017284.1 mouse_genomes_project 10 88150063 88151858 + Pip5k1c protein_coding retained_intron MGP_CBAJ_T0026120.1 MGP_CBAJ_G0017284.1 mouse_genomes_project 10 88152917 88154089 + Pip5k1c protein_coding retained_intron MGP_CBAJ_T0099838.1 MGP_CBAJ_G0038093.1 mouse_genomes_project 10 13302558 13302688 + Gm23892 snoRNA snoRNA MGP_CBAJ_T0098603.1 MGP_CBAJ_G0036858.1 mouse_genomes_project 10 6238768 6238874 + Gm24374 snRNA snRNA MGP_CBAJ_T0006020.1 MGP_CBAJ_G0005031.1 mouse_genomes_project 10 71675044 71677742 + Gm26576 lincRNA lincRNA MGP_CBAJ_T0027122.1 MGP_CBAJ_G0017578.1 mouse_genomes_project 10 141727120 141747957 + MGP_CBAJ_P0027122 Ptges3 protein_coding protein_coding MGP_CBAJ_T0027123.1 MGP_CBAJ_G0017578.1 mouse_genomes_project 10 141727177 141747664 + MGP_CBAJ_P0027123 Ptges3 protein_coding protein_coding MGP_CBAJ_T0027124.1 MGP_CBAJ_G0017578.1 mouse_genomes_project 10 141739951 141743054 + Ptges3 protein_coding retained_intron MGP_CBAJ_T0025315.1 MGP_CBAJ_G0017069.1 mouse_genomes_project 10 75311814 75422512 + MGP_CBAJ_P0025315 Ccdc6 protein_coding protein_coding MGP_CBAJ_T0025316.1 MGP_CBAJ_G0017069.1 mouse_genomes_project 10 75399672 75409092 + Ccdc6 protein_coding retained_intron MGP_CBAJ_T0025317.1 MGP_CBAJ_G0017069.1 mouse_genomes_project 10 75400174 75415039 + MGP_CBAJ_P0025317 Ccdc6 protein_coding protein_coding MGP_CBAJ_T0025318.1 MGP_CBAJ_G0017069.1 mouse_genomes_project 10 75400210 75415052 + MGP_CBAJ_P0025318 Ccdc6 protein_coding protein_coding MGP_CBAJ_T0012240.1 MGP_CBAJ_G0010352.1 mouse_genomes_project 10 5308174 5308817 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0024367.1 MGP_CBAJ_G0016773.1 mouse_genomes_project 10 17427285 17598567 - MGP_CBAJ_P0024367 Arfgef3 protein_coding protein_coding MGP_CBAJ_T0024698.1 MGP_CBAJ_G0016899.1 mouse_genomes_project 10 42273662 42294559 + MGP_CBAJ_P0024698 Ddo protein_coding protein_coding MGP_CBAJ_T0101520.1 MGP_CBAJ_G0039552.1 mouse_genomes_project 10 116772578 116773044 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0002947.1 MGP_CBAJ_G0002760.1 mouse_genomes_project 10 25431813 25577988 + Gm29571 antisense antisense MGP_CBAJ_T0012277.1 MGP_CBAJ_G0010389.1 mouse_genomes_project 10 78807302 78808374 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0024969.1 MGP_CBAJ_G0016993.1 mouse_genomes_project 10 63176857 63344918 + MGP_CBAJ_P0024969 Micu1 protein_coding protein_coding MGP_CBAJ_T0024970.1 MGP_CBAJ_G0016993.1 mouse_genomes_project 10 63176943 63220478 + Micu1 protein_coding retained_intron MGP_CBAJ_T0024971.1 MGP_CBAJ_G0016993.1 mouse_genomes_project 10 63176979 63344916 + MGP_CBAJ_P0024971 Micu1 protein_coding protein_coding MGP_CBAJ_T0024972.1 MGP_CBAJ_G0016993.1 mouse_genomes_project 10 63176998 63344916 + MGP_CBAJ_P0024972 Micu1 protein_coding protein_coding MGP_CBAJ_T0024973.1 MGP_CBAJ_G0016993.1 mouse_genomes_project 10 63177008 63344909 + MGP_CBAJ_P0024973 Micu1 protein_coding protein_coding MGP_CBAJ_T0024974.1 MGP_CBAJ_G0016993.1 mouse_genomes_project 10 63177029 63268311 + MGP_CBAJ_P0024974 Micu1 protein_coding protein_coding MGP_CBAJ_T0024975.1 MGP_CBAJ_G0016993.1 mouse_genomes_project 10 63177038 63228228 + Micu1 protein_coding retained_intron MGP_CBAJ_T0024976.1 MGP_CBAJ_G0016993.1 mouse_genomes_project 10 63215665 63216340 + Micu1 protein_coding processed_transcript MGP_CBAJ_T0024977.1 MGP_CBAJ_G0016993.1 mouse_genomes_project 10 63216355 63233697 + MGP_CBAJ_P0024977 Micu1 protein_coding protein_coding MGP_CBAJ_T0024978.1 MGP_CBAJ_G0016993.1 mouse_genomes_project 10 63238935 63268409 + Micu1 protein_coding processed_transcript MGP_CBAJ_T0024979.1 MGP_CBAJ_G0016993.1 mouse_genomes_project 10 63310283 63327436 + Micu1 protein_coding retained_intron MGP_CBAJ_T0024980.1 MGP_CBAJ_G0016993.1 mouse_genomes_project 10 63342150 63344189 + Micu1 protein_coding retained_intron MGP_CBAJ_T0000788.1 MGP_CBAJ_G0000725.1 mouse_genomes_project 10 91475865 91476335 + TEC TEC MGP_CBAJ_T0026756.1 MGP_CBAJ_G0017455.1 mouse_genomes_project 10 122241696 122244754 + MGP_CBAJ_P0026756 Bbs10 protein_coding protein_coding MGP_CBAJ_T0098613.1 MGP_CBAJ_G0036868.1 mouse_genomes_project 10 31458865 31458972 - Gm24168 snRNA snRNA MGP_CBAJ_T0000783.1 MGP_CBAJ_G0000720.1 mouse_genomes_project 10 67328641 67328983 + TEC TEC MGP_CBAJ_T0025888.1 MGP_CBAJ_G0017223.1 mouse_genomes_project 10 86790202 86800717 + MGP_CBAJ_P0025888 Efna2 protein_coding protein_coding MGP_CBAJ_T0026928.1 MGP_CBAJ_G0017515.1 mouse_genomes_project 10 134330307 134376367 - MGP_CBAJ_P0026928 Tbk1 protein_coding protein_coding MGP_CBAJ_T0026477.1 MGP_CBAJ_G0017374.1 mouse_genomes_project 10 97863661 97945249 + MGP_CBAJ_P0026477 Uhrf1bp1l protein_coding protein_coding MGP_CBAJ_T0002950.1 MGP_CBAJ_G0002763.1 mouse_genomes_project 10 41047457 41052171 - antisense antisense MGP_CBAJ_T0024485.1 MGP_CBAJ_G0016819.1 mouse_genomes_project 10 23650592 23659326 + MGP_CBAJ_P0024485 Taar7e protein_coding protein_coding MGP_CBAJ_T0025001.1 MGP_CBAJ_G0016999.1 mouse_genomes_project 10 63750952 63798861 - MGP_CBAJ_P0025001 Chst3 protein_coding protein_coding MGP_CBAJ_T0025002.1 MGP_CBAJ_G0016999.1 mouse_genomes_project 10 63750954 63762182 - MGP_CBAJ_P0025002 Chst3 protein_coding protein_coding MGP_CBAJ_T0025003.1 MGP_CBAJ_G0016999.1 mouse_genomes_project 10 63755025 63770690 - MGP_CBAJ_P0025003 Chst3 protein_coding protein_coding MGP_CBAJ_T0024329.1 MGP_CBAJ_G0016762.1 mouse_genomes_project 10 12984580 13061850 + MGP_CBAJ_P0024329 Nmbr protein_coding protein_coding MGP_CBAJ_T0024330.1 MGP_CBAJ_G0016762.1 mouse_genomes_project 10 12984586 13046248 + Nmbr protein_coding processed_transcript MGP_CBAJ_T0024331.1 MGP_CBAJ_G0016762.1 mouse_genomes_project 10 12984598 13054097 + Nmbr protein_coding processed_transcript MGP_CBAJ_T0024332.1 MGP_CBAJ_G0016762.1 mouse_genomes_project 10 12984610 13062373 + MGP_CBAJ_P0024332 Nmbr protein_coding protein_coding MGP_CBAJ_T0024333.1 MGP_CBAJ_G0016762.1 mouse_genomes_project 10 12984616 13001139 + Nmbr protein_coding retained_intron MGP_CBAJ_T0024335.1 MGP_CBAJ_G0016762.1 mouse_genomes_project 10 13055235 13069829 + MGP_CBAJ_P0024335 Nmbr protein_coding protein_coding MGP_CBAJ_T0024336.1 MGP_CBAJ_G0016762.1 mouse_genomes_project 10 13055297 13069562 + MGP_CBAJ_P0024336 Nmbr protein_coding nonsense_mediated_decay MGP_CBAJ_T0024337.1 MGP_CBAJ_G0016762.1 mouse_genomes_project 10 13055297 13069562 + MGP_CBAJ_P0024337 Nmbr protein_coding protein_coding MGP_CBAJ_T0026186.1 MGP_CBAJ_G0017299.1 mouse_genomes_project 10 88414621 88431038 - MGP_CBAJ_P0026186 Gna11 protein_coding protein_coding MGP_CBAJ_T0026187.1 MGP_CBAJ_G0017299.1 mouse_genomes_project 10 88416184 88417908 - Gna11 protein_coding retained_intron MGP_CBAJ_T0026188.1 MGP_CBAJ_G0017299.1 mouse_genomes_project 10 88419012 88421013 - Gna11 protein_coding retained_intron MGP_CBAJ_T0027167.1 MGP_CBAJ_G0017589.1 mouse_genomes_project 10 142037127 142039071 - MGP_CBAJ_P0027167 Il23a protein_coding protein_coding MGP_CBAJ_T0026728.1 MGP_CBAJ_G0017447.1 mouse_genomes_project 10 118680455 118800045 + MGP_CBAJ_P0026728 Ppp1r12a protein_coding unknown_likely_coding MGP_CBAJ_T0026729.1 MGP_CBAJ_G0017447.1 mouse_genomes_project 10 118680455 118800327 + MGP_CBAJ_P0026729 Ppp1r12a protein_coding protein_coding MGP_CBAJ_T0012238.1 MGP_CBAJ_G0010350.1 mouse_genomes_project 10 1437819 1438981 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0027163.1 MGP_CBAJ_G0017586.1 mouse_genomes_project 10 141974308 141976079 + MGP_CBAJ_P0027163 Apon protein_coding protein_coding MGP_CBAJ_T0026160.1 MGP_CBAJ_G0017294.1 mouse_genomes_project 10 88243851 88291729 - MGP_CBAJ_P0026160 Nfic protein_coding protein_coding MGP_CBAJ_T0026161.1 MGP_CBAJ_G0017294.1 mouse_genomes_project 10 88246803 88291715 - MGP_CBAJ_P0026161 Nfic protein_coding protein_coding MGP_CBAJ_T0026162.1 MGP_CBAJ_G0017294.1 mouse_genomes_project 10 88246803 88291656 - MGP_CBAJ_P0026162 Nfic protein_coding protein_coding MGP_CBAJ_T0026163.1 MGP_CBAJ_G0017294.1 mouse_genomes_project 10 88246861 88248220 - Nfic protein_coding processed_transcript MGP_CBAJ_T0026164.1 MGP_CBAJ_G0017294.1 mouse_genomes_project 10 88248434 88258479 - MGP_CBAJ_P0026164 Nfic protein_coding protein_coding MGP_CBAJ_T0026165.1 MGP_CBAJ_G0017294.1 mouse_genomes_project 10 88248618 88295547 - MGP_CBAJ_P0026165 Nfic protein_coding protein_coding MGP_CBAJ_T0000780.1 MGP_CBAJ_G0000717.1 mouse_genomes_project 10 27807579 27811201 - TEC TEC MGP_CBAJ_T0025135.1 MGP_CBAJ_G0017031.1 mouse_genomes_project 10 66495942 66497776 + MGP_CBAJ_P0025135 4930507D05Rik protein_coding protein_coding MGP_CBAJ_T0003003.1 MGP_CBAJ_G0002804.1 mouse_genomes_project 10 93755498 93759526 + Gm15990 antisense antisense MGP_CBAJ_T0025249.1 MGP_CBAJ_G0017064.1 mouse_genomes_project 10 73721606 73790633 + MGP_CBAJ_P0025249 Tmem26 protein_coding protein_coding MGP_CBAJ_T0024490.1 MGP_CBAJ_G0016824.1 mouse_genomes_project 10 23818780 23865987 + MGP_CBAJ_P0024490 Stx7 protein_coding unknown_likely_coding MGP_CBAJ_T0026911.1 MGP_CBAJ_G0017506.1 mouse_genomes_project 10 132753294 132758628 + MGP_CBAJ_P0026911 Llph protein_coding protein_coding MGP_CBAJ_T0026912.1 MGP_CBAJ_G0017506.1 mouse_genomes_project 10 132753410 132757726 + MGP_CBAJ_P0026912 Llph protein_coding protein_coding MGP_CBAJ_T0003024.1 MGP_CBAJ_G0002818.1 mouse_genomes_project 10 131812156 131837478 - Grip1os3 antisense antisense MGP_CBAJ_T0003025.1 MGP_CBAJ_G0002818.1 mouse_genomes_project 10 131821461 131837428 - Grip1os3 antisense antisense MGP_CBAJ_T0003026.1 MGP_CBAJ_G0002818.1 mouse_genomes_project 10 131821461 131838027 - Grip1os3 antisense antisense MGP_CBAJ_T0005987.1 MGP_CBAJ_G0005005.1 mouse_genomes_project 10 12161158 12203377 - Gm26835 lincRNA lincRNA MGP_CBAJ_T0026840.1 MGP_CBAJ_G0017490.1 mouse_genomes_project 10 129225644 129227199 - MGP_CBAJ_P0026840 protein_coding protein_coding MGP_CBAJ_T0024606.1 MGP_CBAJ_G0016865.1 mouse_genomes_project 10 34860451 34860517 - MGP_CBAJ_P0024606 Gm17567 protein_coding protein_coding MGP_CBAJ_T0000799.1 MGP_CBAJ_G0000735.1 mouse_genomes_project 10 130092508 130092858 + TEC TEC MGP_CBAJ_T0026929.1 MGP_CBAJ_G0017516.1 mouse_genomes_project 10 134376945 134428133 - MGP_CBAJ_P0026929 Xpot protein_coding unknown_likely_coding MGP_CBAJ_T0026930.1 MGP_CBAJ_G0017516.1 mouse_genomes_project 10 134376952 134430805 - MGP_CBAJ_P0026930 Xpot protein_coding protein_coding MGP_CBAJ_T0024776.1 MGP_CBAJ_G0016920.1 mouse_genomes_project 10 44491054 44501130 - MGP_CBAJ_P0024776 Nr2e1 protein_coding protein_coding MGP_CBAJ_T0024777.1 MGP_CBAJ_G0016920.1 mouse_genomes_project 10 44491146 44524780 - MGP_CBAJ_P0024777 Nr2e1 protein_coding protein_coding MGP_CBAJ_T0024778.1 MGP_CBAJ_G0016920.1 mouse_genomes_project 10 44503785 44517891 - MGP_CBAJ_P0024778 Nr2e1 protein_coding protein_coding MGP_CBAJ_T0026873.1 MGP_CBAJ_G0017501.1 mouse_genomes_project 10 131537054 131577786 - MGP_CBAJ_P0026873 Cand1 protein_coding protein_coding MGP_CBAJ_T0026874.1 MGP_CBAJ_G0017501.1 mouse_genomes_project 10 131544126 131546013 - Cand1 protein_coding retained_intron MGP_CBAJ_T0026875.1 MGP_CBAJ_G0017501.1 mouse_genomes_project 10 131549582 131550413 - Cand1 protein_coding retained_intron MGP_CBAJ_T0026876.1 MGP_CBAJ_G0017501.1 mouse_genomes_project 10 131554280 131577034 - MGP_CBAJ_P0026876 Cand1 protein_coding protein_coding MGP_CBAJ_T0024196.1 MGP_CBAJ_G0016731.1 mouse_genomes_project 10 5214463 5257931 + MGP_CBAJ_P0024196 Katna1 protein_coding protein_coding MGP_CBAJ_T0024197.1 MGP_CBAJ_G0016731.1 mouse_genomes_project 10 5214463 5257930 + MGP_CBAJ_P0024197 Katna1 protein_coding protein_coding MGP_CBAJ_T0024198.1 MGP_CBAJ_G0016731.1 mouse_genomes_project 10 5214471 5245784 + MGP_CBAJ_P0024198 Katna1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024199.1 MGP_CBAJ_G0016731.1 mouse_genomes_project 10 5243278 5255017 + Katna1 protein_coding retained_intron MGP_CBAJ_T0024200.1 MGP_CBAJ_G0016731.1 mouse_genomes_project 10 5254555 5257845 + MGP_CBAJ_P0024200 Katna1 protein_coding protein_coding MGP_CBAJ_T0024201.1 MGP_CBAJ_G0016731.1 mouse_genomes_project 10 5256012 5257929 + MGP_CBAJ_P0024201 Katna1 protein_coding protein_coding MGP_CBAJ_T0024376.1 MGP_CBAJ_G0016777.1 mouse_genomes_project 10 18289674 18291741 + MGP_CBAJ_P0024376 Olig3 protein_coding protein_coding MGP_CBAJ_T0098637.1 MGP_CBAJ_G0036892.1 mouse_genomes_project 10 86569329 86569436 + Gm26243 snRNA snRNA MGP_CBAJ_T0026935.1 MGP_CBAJ_G0017518.1 mouse_genomes_project 10 134544208 134557114 + MGP_CBAJ_P0026935 BC048403 protein_coding protein_coding MGP_CBAJ_T0026936.1 MGP_CBAJ_G0017518.1 mouse_genomes_project 10 134544209 134557127 + MGP_CBAJ_P0026936 BC048403 protein_coding protein_coding MGP_CBAJ_T0026937.1 MGP_CBAJ_G0017518.1 mouse_genomes_project 10 134555158 134556662 + BC048403 protein_coding processed_transcript MGP_CBAJ_T0026782.1 MGP_CBAJ_G0017467.1 mouse_genomes_project 10 126741227 126799439 - MGP_CBAJ_P0026782 Tbc1d15 protein_coding protein_coding MGP_CBAJ_T0098659.1 MGP_CBAJ_G0036914.1 mouse_genomes_project 10 136421024 136421208 + Gm22958 snRNA snRNA MGP_CBAJ_T0026417.1 MGP_CBAJ_G0017360.1 mouse_genomes_project 10 96303730 96339723 + MGP_CBAJ_P0026417 Gnptab protein_coding protein_coding MGP_CBAJ_T0026418.1 MGP_CBAJ_G0017360.1 mouse_genomes_project 10 96303822 96339680 + MGP_CBAJ_P0026418 Gnptab protein_coding protein_coding MGP_CBAJ_T0026419.1 MGP_CBAJ_G0017360.1 mouse_genomes_project 10 96303822 96374580 + MGP_CBAJ_P0026419 Gnptab protein_coding nonsense_mediated_decay MGP_CBAJ_T0026420.1 MGP_CBAJ_G0017360.1 mouse_genomes_project 10 96303824 96374589 + MGP_CBAJ_P0026420 Gnptab protein_coding protein_coding MGP_CBAJ_T0026421.1 MGP_CBAJ_G0017360.1 mouse_genomes_project 10 96356703 96360426 + Gnptab protein_coding processed_transcript MGP_CBAJ_T0026422.1 MGP_CBAJ_G0017360.1 mouse_genomes_project 10 96360498 96368122 + Gnptab protein_coding processed_transcript MGP_CBAJ_T0026423.1 MGP_CBAJ_G0017360.1 mouse_genomes_project 10 96363303 96363989 + Gnptab protein_coding retained_intron MGP_CBAJ_T0026084.1 MGP_CBAJ_G0017276.1 mouse_genomes_project 10 87985378 88001701 + MGP_CBAJ_P0026084 Dapk3 protein_coding protein_coding MGP_CBAJ_T0098643.1 MGP_CBAJ_G0036898.1 mouse_genomes_project 10 96054317 96054432 - Gm26357 snRNA snRNA MGP_CBAJ_T0012297.1 MGP_CBAJ_G0010409.1 mouse_genomes_project 10 129585030 129586688 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000793.1 MGP_CBAJ_G0000729.1 mouse_genomes_project 10 115255274 115255981 - TEC TEC MGP_CBAJ_T0097893.1 MGP_CBAJ_G0036166.1 mouse_genomes_project 10 84639510 84639629 + n-R5s77 rRNA rRNA MGP_CBAJ_T0002965.1 MGP_CBAJ_G0002774.1 mouse_genomes_project 10 66382426 66392022 + Hk1os antisense antisense MGP_CBAJ_T0002966.1 MGP_CBAJ_G0002774.1 mouse_genomes_project 10 66382777 66392696 + Hk1os antisense antisense MGP_CBAJ_T0002967.1 MGP_CBAJ_G0002774.1 mouse_genomes_project 10 66382792 66405537 + Hk1os antisense antisense MGP_CBAJ_T0027306.1 MGP_CBAJ_G0017663.1 mouse_genomes_project 10 143860631 143866041 - MGP_CBAJ_P0027306 Olfr812 protein_coding protein_coding MGP_CBAJ_T0027307.1 MGP_CBAJ_G0017663.1 mouse_genomes_project 10 143860631 143861674 - MGP_CBAJ_P0027307 Olfr812 protein_coding protein_coding MGP_CBAJ_T0024624.1 MGP_CBAJ_G0016877.1 mouse_genomes_project 10 37682935 38021614 + MGP_CBAJ_P0024624 Hs3st5 protein_coding protein_coding MGP_CBAJ_T0024625.1 MGP_CBAJ_G0016877.1 mouse_genomes_project 10 37682940 38022230 + MGP_CBAJ_P0024625 Hs3st5 protein_coding protein_coding MGP_CBAJ_T0024626.1 MGP_CBAJ_G0016877.1 mouse_genomes_project 10 37683010 37897482 + Hs3st5 protein_coding retained_intron MGP_CBAJ_T0024627.1 MGP_CBAJ_G0016877.1 mouse_genomes_project 10 37683147 38022238 + MGP_CBAJ_P0024627 Hs3st5 protein_coding protein_coding MGP_CBAJ_T0024628.1 MGP_CBAJ_G0016877.1 mouse_genomes_project 10 37683528 38011139 + Hs3st5 protein_coding processed_transcript MGP_CBAJ_T0024819.1 MGP_CBAJ_G0016933.1 mouse_genomes_project 10 46061678 46124657 - MGP_CBAJ_P0024819 Aim1 protein_coding protein_coding MGP_CBAJ_T0024820.1 MGP_CBAJ_G0016933.1 mouse_genomes_project 10 46062007 46294728 - MGP_CBAJ_P0024820 Aim1 protein_coding protein_coding MGP_CBAJ_T0026018.1 MGP_CBAJ_G0017255.1 mouse_genomes_project 10 87529657 87535765 + MGP_CBAJ_P0026018 Amh protein_coding protein_coding MGP_CBAJ_T0002994.1 MGP_CBAJ_G0002797.1 mouse_genomes_project 10 88260412 88262417 + Gm16104 antisense antisense MGP_CBAJ_T0027289.1 MGP_CBAJ_G0017651.1 mouse_genomes_project 10 143657045 143658002 - MGP_CBAJ_P0027289 Olfr801 protein_coding protein_coding MGP_CBAJ_T0027290.1 MGP_CBAJ_G0017651.1 mouse_genomes_project 10 143657602 143663217 - MGP_CBAJ_P0027290 Olfr801 protein_coding protein_coding MGP_CBAJ_T0027291.1 MGP_CBAJ_G0017651.1 mouse_genomes_project 10 143661607 143663189 - Olfr801 protein_coding processed_transcript MGP_CBAJ_T0099892.1 MGP_CBAJ_G0038147.1 mouse_genomes_project 10 143244013 143244147 + Gm25764 snoRNA snoRNA MGP_CBAJ_T0024581.1 MGP_CBAJ_G0016853.1 mouse_genomes_project 10 31328886 31339348 - MGP_CBAJ_P0024581 Hey2 protein_coding protein_coding MGP_CBAJ_T0025748.1 MGP_CBAJ_G0017193.1 mouse_genomes_project 10 86299615 86308030 - MGP_CBAJ_P0025748 Rnf126 protein_coding protein_coding MGP_CBAJ_T0101524.1 MGP_CBAJ_G0039556.1 mouse_genomes_project 10 143512587 143513474 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0025835.1 MGP_CBAJ_G0017215.1 mouse_genomes_project 10 86635655 86648936 + Gpx4 protein_coding processed_transcript MGP_CBAJ_T0025836.1 MGP_CBAJ_G0017215.1 mouse_genomes_project 10 86641929 86648936 + MGP_CBAJ_P0025836 Gpx4 protein_coding protein_coding MGP_CBAJ_T0025837.1 MGP_CBAJ_G0017215.1 mouse_genomes_project 10 86642476 86645031 + Gpx4 protein_coding processed_transcript MGP_CBAJ_T0025838.1 MGP_CBAJ_G0017215.1 mouse_genomes_project 10 86642478 86648936 + MGP_CBAJ_P0025838 Gpx4 protein_coding protein_coding MGP_CBAJ_T0025839.1 MGP_CBAJ_G0017215.1 mouse_genomes_project 10 86642906 86648891 + MGP_CBAJ_P0025839 Gpx4 protein_coding protein_coding MGP_CBAJ_T0025840.1 MGP_CBAJ_G0017215.1 mouse_genomes_project 10 86648390 86648862 + Gpx4 protein_coding retained_intron MGP_CBAJ_T0025841.1 MGP_CBAJ_G0017215.1 mouse_genomes_project 10 86648494 86648860 + Gpx4 protein_coding retained_intron MGP_CBAJ_T0027021.1 MGP_CBAJ_G0017547.1 mouse_genomes_project 10 140759642 140763587 - MGP_CBAJ_P0027021 Mbd6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027022.1 MGP_CBAJ_G0017547.1 mouse_genomes_project 10 140759642 140766711 - MGP_CBAJ_P0027022 Mbd6 protein_coding protein_coding MGP_CBAJ_T0027023.1 MGP_CBAJ_G0017547.1 mouse_genomes_project 10 140759642 140761355 - MGP_CBAJ_P0027023 Mbd6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027024.1 MGP_CBAJ_G0017547.1 mouse_genomes_project 10 140759642 140766586 - MGP_CBAJ_P0027024 Mbd6 protein_coding protein_coding MGP_CBAJ_T0027025.1 MGP_CBAJ_G0017547.1 mouse_genomes_project 10 140760362 140762045 - MGP_CBAJ_P0027025 Mbd6 protein_coding protein_coding MGP_CBAJ_T0027026.1 MGP_CBAJ_G0017547.1 mouse_genomes_project 10 140761212 140762058 - MGP_CBAJ_P0027026 Mbd6 protein_coding protein_coding MGP_CBAJ_T0027027.1 MGP_CBAJ_G0017547.1 mouse_genomes_project 10 140764263 140766549 - MGP_CBAJ_P0027027 Mbd6 protein_coding protein_coding MGP_CBAJ_T0027108.1 MGP_CBAJ_G0017573.1 mouse_genomes_project 10 141520425 141529931 - MGP_CBAJ_P0027108 Rdh7 protein_coding protein_coding MGP_CBAJ_T0027109.1 MGP_CBAJ_G0017573.1 mouse_genomes_project 10 141526834 141529444 - Rdh7 protein_coding processed_transcript MGP_CBAJ_T0026726.1 MGP_CBAJ_G0017445.1 mouse_genomes_project 10 117935186 118175303 - MGP_CBAJ_P0026726 Ptprq protein_coding protein_coding MGP_CBAJ_T0025499.1 MGP_CBAJ_G0017109.1 mouse_genomes_project 10 82057594 82124769 - MGP_CBAJ_P0025499 Slc5a4b protein_coding protein_coding MGP_CBAJ_T0005999.1 MGP_CBAJ_G0005014.1 mouse_genomes_project 10 35201019 35204015 - Gm26564 lincRNA lincRNA MGP_CBAJ_T0026661.1 MGP_CBAJ_G0017424.1 mouse_genomes_project 10 109481446 109582800 + MGP_CBAJ_P0026661 Kitl protein_coding protein_coding MGP_CBAJ_T0026662.1 MGP_CBAJ_G0017424.1 mouse_genomes_project 10 109481642 109553179 + MGP_CBAJ_P0026662 Kitl protein_coding protein_coding MGP_CBAJ_T0026663.1 MGP_CBAJ_G0017424.1 mouse_genomes_project 10 109481732 109576515 + MGP_CBAJ_P0026663 Kitl protein_coding protein_coding MGP_CBAJ_T0027178.1 MGP_CBAJ_G0017596.1 mouse_genomes_project 10 142159215 142167522 - MGP_CBAJ_P0027178 Nabp2 protein_coding protein_coding MGP_CBAJ_T0027179.1 MGP_CBAJ_G0017596.1 mouse_genomes_project 10 142159215 142167668 - MGP_CBAJ_P0027179 Nabp2 protein_coding protein_coding MGP_CBAJ_T0027180.1 MGP_CBAJ_G0017596.1 mouse_genomes_project 10 142159294 142167516 - MGP_CBAJ_P0027180 Nabp2 protein_coding protein_coding MGP_CBAJ_T0027181.1 MGP_CBAJ_G0017596.1 mouse_genomes_project 10 142159410 142166637 - Nabp2 protein_coding retained_intron MGP_CBAJ_T0027182.1 MGP_CBAJ_G0017596.1 mouse_genomes_project 10 142159720 142167426 - MGP_CBAJ_P0027182 Nabp2 protein_coding protein_coding MGP_CBAJ_T0027183.1 MGP_CBAJ_G0017596.1 mouse_genomes_project 10 142159730 142168345 - MGP_CBAJ_P0027183 Nabp2 protein_coding protein_coding MGP_CBAJ_T0027184.1 MGP_CBAJ_G0017596.1 mouse_genomes_project 10 142165956 142166974 - MGP_CBAJ_P0027184 Nabp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027185.1 MGP_CBAJ_G0017596.1 mouse_genomes_project 10 142166512 142169286 - MGP_CBAJ_P0027185 Nabp2 protein_coding protein_coding MGP_CBAJ_T0027186.1 MGP_CBAJ_G0017596.1 mouse_genomes_project 10 142166540 142167530 - MGP_CBAJ_P0027186 Nabp2 protein_coding protein_coding MGP_CBAJ_T0024358.1 MGP_CBAJ_G0016771.1 mouse_genomes_project 10 17199311 17343123 + MGP_CBAJ_P0024358 Nhsl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024359.1 MGP_CBAJ_G0016771.1 mouse_genomes_project 10 17221399 17238073 + Nhsl1 protein_coding processed_transcript MGP_CBAJ_T0024360.1 MGP_CBAJ_G0016771.1 mouse_genomes_project 10 17221436 17331295 + Nhsl1 protein_coding retained_intron MGP_CBAJ_T0024361.1 MGP_CBAJ_G0016771.1 mouse_genomes_project 10 17221436 17352719 + MGP_CBAJ_P0024361 Nhsl1 protein_coding protein_coding MGP_CBAJ_T0024362.1 MGP_CBAJ_G0016771.1 mouse_genomes_project 10 17289054 17292606 + Nhsl1 protein_coding retained_intron MGP_CBAJ_T0024363.1 MGP_CBAJ_G0016771.1 mouse_genomes_project 10 17289134 17316891 + Nhsl1 protein_coding processed_transcript MGP_CBAJ_T0024364.1 MGP_CBAJ_G0016771.1 mouse_genomes_project 10 17289147 17344793 + MGP_CBAJ_P0024364 Nhsl1 protein_coding protein_coding MGP_CBAJ_T0024365.1 MGP_CBAJ_G0016771.1 mouse_genomes_project 10 17289147 17352716 + MGP_CBAJ_P0024365 Nhsl1 protein_coding protein_coding MGP_CBAJ_T0101516.1 MGP_CBAJ_G0039548.1 mouse_genomes_project 10 84083308 84084460 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0025679.1 MGP_CBAJ_G0017165.1 mouse_genomes_project 10 85169814 85203662 + MGP_CBAJ_P0025679 Slc1a6 protein_coding protein_coding MGP_CBAJ_T0026426.1 MGP_CBAJ_G0017362.1 mouse_genomes_project 10 96386532 96402225 + MGP_CBAJ_P0026426 Sycp3 protein_coding protein_coding MGP_CBAJ_T0026427.1 MGP_CBAJ_G0017362.1 mouse_genomes_project 10 96386627 96402226 + MGP_CBAJ_P0026427 Sycp3 protein_coding protein_coding MGP_CBAJ_T0026428.1 MGP_CBAJ_G0017362.1 mouse_genomes_project 10 96386627 96402226 + MGP_CBAJ_P0026428 Sycp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024903.1 MGP_CBAJ_G0016968.1 mouse_genomes_project 10 59849101 59863912 + MGP_CBAJ_P0024903 Gja1 protein_coding protein_coding MGP_CBAJ_T0026604.1 MGP_CBAJ_G0017396.1 mouse_genomes_project 10 102913158 102942260 + MGP_CBAJ_P0026604 Ndufa12 protein_coding protein_coding MGP_CBAJ_T0026605.1 MGP_CBAJ_G0017396.1 mouse_genomes_project 10 102913162 102917636 + Ndufa12 protein_coding retained_intron MGP_CBAJ_T0026606.1 MGP_CBAJ_G0017396.1 mouse_genomes_project 10 102914169 102941560 + MGP_CBAJ_P0026606 Ndufa12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012260.1 MGP_CBAJ_G0010372.1 mouse_genomes_project 10 44327767 44327944 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0025405.1 MGP_CBAJ_G0017082.1 mouse_genomes_project 10 80817165 80869261 + MGP_CBAJ_P0025405 Gnaz protein_coding protein_coding MGP_CBAJ_T0025406.1 MGP_CBAJ_G0017082.1 mouse_genomes_project 10 80817197 80844777 + Gnaz protein_coding processed_transcript MGP_CBAJ_T0025407.1 MGP_CBAJ_G0017082.1 mouse_genomes_project 10 80843573 80869250 + MGP_CBAJ_P0025407 Gnaz protein_coding protein_coding MGP_CBAJ_T0009478.1 MGP_CBAJ_G0007616.1 mouse_genomes_project 10 84790641 84790745 + Mir6410 miRNA miRNA MGP_CBAJ_T0026327.1 MGP_CBAJ_G0017334.1 mouse_genomes_project 10 92638067 92699198 - MGP_CBAJ_P0026327 Cry1 protein_coding protein_coding MGP_CBAJ_T0024072.1 MGP_CBAJ_G0016705.1 mouse_genomes_project 10 119691 135331 - MGP_CBAJ_P0024072 H60c protein_coding protein_coding MGP_CBAJ_T0027093.1 MGP_CBAJ_G0017563.1 mouse_genomes_project 10 141262808 141280198 + MGP_CBAJ_P0027093 Myo1a protein_coding protein_coding MGP_CBAJ_T0027094.1 MGP_CBAJ_G0017563.1 mouse_genomes_project 10 141262894 141292599 + MGP_CBAJ_P0027094 Myo1a protein_coding unknown_likely_coding MGP_CBAJ_T0003037.1 MGP_CBAJ_G0002828.1 mouse_genomes_project 10 142149658 142153385 - Gm17201 antisense antisense MGP_CBAJ_T0024595.1 MGP_CBAJ_G0016859.1 mouse_genomes_project 10 33834594 34303998 + MGP_CBAJ_P0024595 Trdn protein_coding protein_coding MGP_CBAJ_T0024596.1 MGP_CBAJ_G0016859.1 mouse_genomes_project 10 33834835 34301807 + MGP_CBAJ_P0024596 Trdn protein_coding unknown_likely_coding MGP_CBAJ_T0026965.1 MGP_CBAJ_G0017527.1 mouse_genomes_project 10 139269596 139324149 + MGP_CBAJ_P0026965 Lrig3 protein_coding protein_coding MGP_CBAJ_T0025802.1 MGP_CBAJ_G0017204.1 mouse_genomes_project 10 86477239 86484065 - MGP_CBAJ_P0025802 R3hdm4 protein_coding protein_coding MGP_CBAJ_T0025803.1 MGP_CBAJ_G0017204.1 mouse_genomes_project 10 86477424 86484141 - MGP_CBAJ_P0025803 R3hdm4 protein_coding protein_coding MGP_CBAJ_T0026029.1 MGP_CBAJ_G0017258.1 mouse_genomes_project 10 87567893 87579126 - MGP_CBAJ_P0026029 Lingo3 protein_coding protein_coding MGP_CBAJ_T0026051.1 MGP_CBAJ_G0017268.1 mouse_genomes_project 10 87824646 87840699 - MGP_CBAJ_P0026051 Sgta protein_coding unknown_likely_coding MGP_CBAJ_T0026052.1 MGP_CBAJ_G0017268.1 mouse_genomes_project 10 87824652 87840724 - MGP_CBAJ_P0026052 Sgta protein_coding protein_coding MGP_CBAJ_T0026366.1 MGP_CBAJ_G0017345.1 mouse_genomes_project 10 94171473 94172925 - MGP_CBAJ_P0026366 Gm6729 protein_coding protein_coding MGP_CBAJ_T0024385.1 MGP_CBAJ_G0016781.1 mouse_genomes_project 10 18693270 18743599 + MGP_CBAJ_P0024385 Il20ra protein_coding protein_coding MGP_CBAJ_T0026270.1 MGP_CBAJ_G0017315.1 mouse_genomes_project 10 89981419 89996871 - MGP_CBAJ_P0026270 Nfyb protein_coding protein_coding MGP_CBAJ_T0026271.1 MGP_CBAJ_G0017315.1 mouse_genomes_project 10 89982011 89996828 - Nfyb protein_coding retained_intron MGP_CBAJ_T0026272.1 MGP_CBAJ_G0017315.1 mouse_genomes_project 10 89983200 89984384 - Nfyb protein_coding retained_intron MGP_CBAJ_T0026273.1 MGP_CBAJ_G0017315.1 mouse_genomes_project 10 89983890 89985273 - Nfyb protein_coding retained_intron MGP_CBAJ_T0026274.1 MGP_CBAJ_G0017315.1 mouse_genomes_project 10 89985138 89996385 - Nfyb protein_coding processed_transcript MGP_CBAJ_T0026275.1 MGP_CBAJ_G0017315.1 mouse_genomes_project 10 89985240 89996368 - MGP_CBAJ_P0026275 Nfyb protein_coding protein_coding MGP_CBAJ_T0026276.1 MGP_CBAJ_G0017315.1 mouse_genomes_project 10 89987791 89990032 - Nfyb protein_coding retained_intron MGP_CBAJ_T0012272.1 MGP_CBAJ_G0010384.1 mouse_genomes_project 10 65147353 65147718 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0027274.1 MGP_CBAJ_G0017639.1 mouse_genomes_project 10 143388864 143399197 + MGP_CBAJ_P0027274 Olfr786 protein_coding protein_coding MGP_CBAJ_T0027275.1 MGP_CBAJ_G0017639.1 mouse_genomes_project 10 143398258 143399197 + MGP_CBAJ_P0027275 Olfr786 protein_coding protein_coding MGP_CBAJ_T0097753.1 MGP_CBAJ_G0036026.1 mouse_genomes_project 10 128345039 128347221 + pseudogene pseudogene MGP_CBAJ_T0024369.1 MGP_CBAJ_G0016775.1 mouse_genomes_project 10 17708188 17722752 + MGP_CBAJ_P0024369 Perp protein_coding protein_coding MGP_CBAJ_T0026772.1 MGP_CBAJ_G0017461.1 mouse_genomes_project 10 123271884 123319141 - MGP_CBAJ_P0026772 Glipr1l1 protein_coding protein_coding MGP_CBAJ_T0025073.1 MGP_CBAJ_G0017019.1 mouse_genomes_project 10 65605985 65613196 + MGP_CBAJ_P0025073 Tysnd1 protein_coding protein_coding MGP_CBAJ_T0027168.1 MGP_CBAJ_G0017590.1 mouse_genomes_project 10 142045715 142066902 + MGP_CBAJ_P0027168 Pan2 protein_coding unknown_likely_coding MGP_CBAJ_T0027169.1 MGP_CBAJ_G0017590.1 mouse_genomes_project 10 142045724 142066908 + MGP_CBAJ_P0027169 Pan2 protein_coding protein_coding MGP_CBAJ_T0098254.1 MGP_CBAJ_G0036526.1 mouse_genomes_project 10 102362383 102366294 + sense_intronic sense_intronic MGP_CBAJ_T0027285.1 MGP_CBAJ_G0017648.1 mouse_genomes_project 10 143579443 143580376 - MGP_CBAJ_P0027285 Olfr796 protein_coding protein_coding MGP_CBAJ_T0027286.1 MGP_CBAJ_G0017648.1 mouse_genomes_project 10 143579443 143585628 - MGP_CBAJ_P0027286 Olfr796 protein_coding protein_coding MGP_CBAJ_T0101517.1 MGP_CBAJ_G0039549.1 mouse_genomes_project 10 84878387 84879325 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0024813.1 MGP_CBAJ_G0016930.1 mouse_genomes_project 10 45660898 45703146 + MGP_CBAJ_P0024813 F930017D23Rik protein_coding protein_coding MGP_CBAJ_T0009495.1 MGP_CBAJ_G0007633.1 mouse_genomes_project 10 94419544 94419677 - Gm25745 miRNA miRNA MGP_CBAJ_T0011144.1 MGP_CBAJ_G0009282.1 mouse_genomes_project 10 44186401 44186646 + Gm23533 misc_RNA misc_RNA MGP_CBAJ_T0009493.1 MGP_CBAJ_G0007631.1 mouse_genomes_project 10 92811860 92811960 - Gm27392 miRNA miRNA MGP_CBAJ_T0024948.1 MGP_CBAJ_G0016984.1 mouse_genomes_project 10 62070382 62074987 - MGP_CBAJ_P0024948 Gm17542 protein_coding protein_coding MGP_CBAJ_T0026624.1 MGP_CBAJ_G0017402.1 mouse_genomes_project 10 104278646 104309191 - MGP_CBAJ_P0026624 Socs2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026625.1 MGP_CBAJ_G0017402.1 mouse_genomes_project 10 104280951 104286260 - Socs2 protein_coding retained_intron MGP_CBAJ_T0026626.1 MGP_CBAJ_G0017402.1 mouse_genomes_project 10 104281646 104308877 - Socs2 protein_coding processed_transcript MGP_CBAJ_T0026627.1 MGP_CBAJ_G0017402.1 mouse_genomes_project 10 104294695 104309137 - Socs2 protein_coding processed_transcript MGP_CBAJ_T0026628.1 MGP_CBAJ_G0017402.1 mouse_genomes_project 10 104308562 104310992 - Socs2 protein_coding processed_transcript MGP_CBAJ_T0026630.1 MGP_CBAJ_G0017402.1 mouse_genomes_project 10 104308758 104311448 - MGP_CBAJ_P0026630 Socs2 protein_coding protein_coding MGP_CBAJ_T0026631.1 MGP_CBAJ_G0017402.1 mouse_genomes_project 10 104309643 104312833 - Socs2 protein_coding processed_transcript MGP_CBAJ_T0026632.1 MGP_CBAJ_G0017402.1 mouse_genomes_project 10 104311255 104312164 - Socs2 protein_coding processed_transcript MGP_CBAJ_T0025462.1 MGP_CBAJ_G0017093.1 mouse_genomes_project 10 81572743 81580133 - MGP_CBAJ_P0025462 Susd2 protein_coding protein_coding MGP_CBAJ_T0025463.1 MGP_CBAJ_G0017093.1 mouse_genomes_project 10 81572743 81580133 - MGP_CBAJ_P0025463 Susd2 protein_coding protein_coding MGP_CBAJ_T0009467.1 MGP_CBAJ_G0007605.1 mouse_genomes_project 10 64637320 64637411 + Mir6408 miRNA miRNA MGP_CBAJ_T0002999.1 MGP_CBAJ_G0002801.1 mouse_genomes_project 10 90428021 90430910 - 1700025N21Rik antisense antisense MGP_CBAJ_T0027296.1 MGP_CBAJ_G0017655.1 mouse_genomes_project 10 143723102 143725434 - MGP_CBAJ_P0027296 Olfr805 protein_coding protein_coding MGP_CBAJ_T0027297.1 MGP_CBAJ_G0017655.1 mouse_genomes_project 10 143725043 143728820 - MGP_CBAJ_P0027297 Olfr805 protein_coding protein_coding MGP_CBAJ_T0025192.1 MGP_CBAJ_G0017045.1 mouse_genomes_project 10 67330448 67330898 + MGP_CBAJ_P0025192 Atoh7 protein_coding protein_coding MGP_CBAJ_T0026925.1 MGP_CBAJ_G0017512.1 mouse_genomes_project 10 133982042 134032549 - MGP_CBAJ_P0026925 Tbc1d30 protein_coding protein_coding MGP_CBAJ_T0009466.1 MGP_CBAJ_G0007604.1 mouse_genomes_project 10 63790787 63790854 - Gm22117 miRNA miRNA MGP_CBAJ_T0012282.1 MGP_CBAJ_G0010394.1 mouse_genomes_project 10 81945526 81945800 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0024607.1 MGP_CBAJ_G0016866.1 mouse_genomes_project 10 34862017 34888067 - MGP_CBAJ_P0024607 Rwdd1 protein_coding protein_coding MGP_CBAJ_T0024608.1 MGP_CBAJ_G0016866.1 mouse_genomes_project 10 34862023 34866708 - Rwdd1 protein_coding retained_intron MGP_CBAJ_T0026053.1 MGP_CBAJ_G0017269.1 mouse_genomes_project 10 87850457 87862980 + MGP_CBAJ_P0026053 Thop1 protein_coding protein_coding MGP_CBAJ_T0026054.1 MGP_CBAJ_G0017269.1 mouse_genomes_project 10 87850549 87855298 + Thop1 protein_coding retained_intron MGP_CBAJ_T0026055.1 MGP_CBAJ_G0017269.1 mouse_genomes_project 10 87850581 87859025 + Thop1 protein_coding processed_transcript MGP_CBAJ_T0026056.1 MGP_CBAJ_G0017269.1 mouse_genomes_project 10 87853699 87859176 + Thop1 protein_coding retained_intron MGP_CBAJ_T0026057.1 MGP_CBAJ_G0017269.1 mouse_genomes_project 10 87859288 87860500 + Thop1 protein_coding retained_intron MGP_CBAJ_T0009476.1 MGP_CBAJ_G0007614.1 mouse_genomes_project 10 84668208 84668266 - Mir7659 miRNA miRNA MGP_CBAJ_T0025065.1 MGP_CBAJ_G0017014.1 mouse_genomes_project 10 65363934 65365627 - MGP_CBAJ_P0025065 D830039M14Rik protein_coding protein_coding MGP_CBAJ_T0024944.1 MGP_CBAJ_G0016980.1 mouse_genomes_project 10 61774137 61832769 + MGP_CBAJ_P0024944 Ranbp2 protein_coding protein_coding MGP_CBAJ_T0027276.1 MGP_CBAJ_G0017640.1 mouse_genomes_project 10 143415862 143419139 + MGP_CBAJ_P0027276 Olfr787 protein_coding protein_coding MGP_CBAJ_T0099851.1 MGP_CBAJ_G0038106.1 mouse_genomes_project 10 41847521 41847735 + Rnu3a snoRNA snoRNA MGP_CBAJ_T0006001.1 MGP_CBAJ_G0005016.1 mouse_genomes_project 10 41391946 41393420 - Gm26824 lincRNA lincRNA MGP_CBAJ_T0026536.1 MGP_CBAJ_G0017380.1 mouse_genomes_project 10 101177277 101219927 - MGP_CBAJ_P0026536 Nedd1 protein_coding protein_coding MGP_CBAJ_T0026971.1 MGP_CBAJ_G0017530.1 mouse_genomes_project 10 140416911 140438579 + MGP_CBAJ_P0026971 Avil protein_coding protein_coding MGP_CBAJ_T0026972.1 MGP_CBAJ_G0017530.1 mouse_genomes_project 10 140416941 140422687 + MGP_CBAJ_P0026972 Avil protein_coding protein_coding MGP_CBAJ_T0026973.1 MGP_CBAJ_G0017530.1 mouse_genomes_project 10 140419203 140422759 + MGP_CBAJ_P0026973 Avil protein_coding protein_coding MGP_CBAJ_T0026974.1 MGP_CBAJ_G0017530.1 mouse_genomes_project 10 140419339 140438363 + MGP_CBAJ_P0026974 Avil protein_coding protein_coding MGP_CBAJ_T0025581.1 MGP_CBAJ_G0017131.1 mouse_genomes_project 10 83703544 83740685 + MGP_CBAJ_P0025581 Itgb2 protein_coding protein_coding MGP_CBAJ_T0025582.1 MGP_CBAJ_G0017131.1 mouse_genomes_project 10 83703639 83722198 + MGP_CBAJ_P0025582 Itgb2 protein_coding protein_coding MGP_CBAJ_T0025583.1 MGP_CBAJ_G0017131.1 mouse_genomes_project 10 83703662 83723675 + MGP_CBAJ_P0025583 Itgb2 protein_coding protein_coding MGP_CBAJ_T0025584.1 MGP_CBAJ_G0017131.1 mouse_genomes_project 10 83703666 83740621 + MGP_CBAJ_P0025584 Itgb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025585.1 MGP_CBAJ_G0017131.1 mouse_genomes_project 10 83703672 83740707 + MGP_CBAJ_P0025585 Itgb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025102.1 MGP_CBAJ_G0017025.1 mouse_genomes_project 10 66126854 66128528 + MGP_CBAJ_P0025102 Neurog3 protein_coding protein_coding MGP_CBAJ_T0012261.1 MGP_CBAJ_G0010373.1 mouse_genomes_project 10 45345289 45345644 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000789.1 MGP_CBAJ_G0000726.1 mouse_genomes_project 10 95060792 95063136 + TEC TEC MGP_CBAJ_T0000790.1 MGP_CBAJ_G0000726.1 mouse_genomes_project 10 95062030 95062408 + TEC TEC MGP_CBAJ_T0025889.1 MGP_CBAJ_G0017224.1 mouse_genomes_project 10 86853449 86870901 + MGP_CBAJ_P0025889 Mum1 protein_coding protein_coding MGP_CBAJ_T0025890.1 MGP_CBAJ_G0017224.1 mouse_genomes_project 10 86853670 86870898 + Mum1 protein_coding retained_intron MGP_CBAJ_T0025891.1 MGP_CBAJ_G0017224.1 mouse_genomes_project 10 86853687 86859696 + MGP_CBAJ_P0025891 Mum1 protein_coding protein_coding MGP_CBAJ_T0025892.1 MGP_CBAJ_G0017224.1 mouse_genomes_project 10 86853695 86870896 + Mum1 protein_coding retained_intron MGP_CBAJ_T0025893.1 MGP_CBAJ_G0017224.1 mouse_genomes_project 10 86853766 86856187 + Mum1 protein_coding retained_intron MGP_CBAJ_T0025894.1 MGP_CBAJ_G0017224.1 mouse_genomes_project 10 86861209 86870901 + Mum1 protein_coding retained_intron MGP_CBAJ_T0025895.1 MGP_CBAJ_G0017224.1 mouse_genomes_project 10 86861210 86864130 + Mum1 protein_coding retained_intron MGP_CBAJ_T0025896.1 MGP_CBAJ_G0017224.1 mouse_genomes_project 10 86861275 86870899 + Mum1 protein_coding retained_intron MGP_CBAJ_T0025897.1 MGP_CBAJ_G0017224.1 mouse_genomes_project 10 86863126 86867408 + Mum1 protein_coding retained_intron MGP_CBAJ_T0025898.1 MGP_CBAJ_G0017224.1 mouse_genomes_project 10 86868553 86870898 + Mum1 protein_coding retained_intron MGP_CBAJ_T0025899.1 MGP_CBAJ_G0017224.1 mouse_genomes_project 10 86869609 86870898 + Mum1 protein_coding processed_transcript MGP_CBAJ_T0026227.1 MGP_CBAJ_G0017305.1 mouse_genomes_project 10 88535449 88545145 + MGP_CBAJ_P0026227 Ankrd24 protein_coding protein_coding MGP_CBAJ_T0026228.1 MGP_CBAJ_G0017305.1 mouse_genomes_project 10 88535488 88536601 + MGP_CBAJ_P0026228 Ankrd24 protein_coding protein_coding MGP_CBAJ_T0026229.1 MGP_CBAJ_G0017305.1 mouse_genomes_project 10 88535542 88558857 + MGP_CBAJ_P0026229 Ankrd24 protein_coding protein_coding MGP_CBAJ_T0026230.1 MGP_CBAJ_G0017305.1 mouse_genomes_project 10 88535615 88536596 + MGP_CBAJ_P0026230 Ankrd24 protein_coding protein_coding MGP_CBAJ_T0026231.1 MGP_CBAJ_G0017305.1 mouse_genomes_project 10 88540548 88551724 + MGP_CBAJ_P0026231 Ankrd24 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026232.1 MGP_CBAJ_G0017305.1 mouse_genomes_project 10 88540552 88558854 + Ankrd24 protein_coding retained_intron MGP_CBAJ_T0026233.1 MGP_CBAJ_G0017305.1 mouse_genomes_project 10 88540552 88543266 + MGP_CBAJ_P0026233 Ankrd24 protein_coding protein_coding MGP_CBAJ_T0026234.1 MGP_CBAJ_G0017305.1 mouse_genomes_project 10 88540558 88542743 + Ankrd24 protein_coding retained_intron MGP_CBAJ_T0026235.1 MGP_CBAJ_G0017305.1 mouse_genomes_project 10 88540558 88546744 + MGP_CBAJ_P0026235 Ankrd24 protein_coding protein_coding MGP_CBAJ_T0026236.1 MGP_CBAJ_G0017305.1 mouse_genomes_project 10 88541383 88544927 + MGP_CBAJ_P0026236 Ankrd24 protein_coding protein_coding MGP_CBAJ_T0026237.1 MGP_CBAJ_G0017305.1 mouse_genomes_project 10 88549632 88551664 + MGP_CBAJ_P0026237 Ankrd24 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026238.1 MGP_CBAJ_G0017305.1 mouse_genomes_project 10 88549644 88554684 + Ankrd24 protein_coding retained_intron MGP_CBAJ_T0026239.1 MGP_CBAJ_G0017305.1 mouse_genomes_project 10 88552515 88558721 + MGP_CBAJ_P0026239 Ankrd24 protein_coding protein_coding MGP_CBAJ_T0026240.1 MGP_CBAJ_G0017305.1 mouse_genomes_project 10 88555348 88555878 + Ankrd24 protein_coding retained_intron MGP_CBAJ_T0025951.1 MGP_CBAJ_G0017236.1 mouse_genomes_project 10 87045177 87051870 - MGP_CBAJ_P0025951 Mbd3 protein_coding protein_coding MGP_CBAJ_T0025952.1 MGP_CBAJ_G0017236.1 mouse_genomes_project 10 87045178 87052189 - MGP_CBAJ_P0025952 Mbd3 protein_coding protein_coding MGP_CBAJ_T0025953.1 MGP_CBAJ_G0017236.1 mouse_genomes_project 10 87045478 87052061 - MGP_CBAJ_P0025953 Mbd3 protein_coding protein_coding MGP_CBAJ_T0025954.1 MGP_CBAJ_G0017236.1 mouse_genomes_project 10 87045621 87048361 - MGP_CBAJ_P0025954 Mbd3 protein_coding protein_coding MGP_CBAJ_T0025955.1 MGP_CBAJ_G0017236.1 mouse_genomes_project 10 87046536 87047968 - Mbd3 protein_coding processed_transcript MGP_CBAJ_T0026476.1 MGP_CBAJ_G0017373.1 mouse_genomes_project 10 97826734 97849667 - MGP_CBAJ_P0026476 Actr6 protein_coding protein_coding MGP_CBAJ_T0025333.1 MGP_CBAJ_G0017073.1 mouse_genomes_project 10 76194537 76260496 + MGP_CBAJ_P0025333 4930533K18Rik protein_coding protein_coding MGP_CBAJ_T0011666.1 MGP_CBAJ_G0009802.1 mouse_genomes_project 10 143701251 143703777 + MGP_CBAJ_P0011666 Olfr779 polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0011667.1 MGP_CBAJ_G0009802.1 mouse_genomes_project 10 143701596 143701986 + MGP_CBAJ_P0011667 Olfr779 polymorphic_pseudogene protein_coding MGP_CBAJ_T0026137.1 MGP_CBAJ_G0017289.1 mouse_genomes_project 10 88202865 88211600 + MGP_CBAJ_P0026137 Mfsd12 protein_coding protein_coding MGP_CBAJ_T0026138.1 MGP_CBAJ_G0017289.1 mouse_genomes_project 10 88202926 88206607 + MGP_CBAJ_P0026138 Mfsd12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0099885.1 MGP_CBAJ_G0038140.1 mouse_genomes_project 10 129086591 129086668 - Gm26311 snoRNA snoRNA MGP_CBAJ_T0026247.1 MGP_CBAJ_G0017310.1 mouse_genomes_project 10 89623856 89629937 - MGP_CBAJ_P0026247 Gm1553 protein_coding protein_coding MGP_CBAJ_T0027287.1 MGP_CBAJ_G0017649.1 mouse_genomes_project 10 143628550 143629486 + MGP_CBAJ_P0027287 Olfr799 protein_coding protein_coding MGP_CBAJ_T0025612.1 MGP_CBAJ_G0017141.1 mouse_genomes_project 10 84018547 84019565 - MGP_CBAJ_P0025612 protein_coding protein_coding MGP_CBAJ_T0024730.1 MGP_CBAJ_G0016909.1 mouse_genomes_project 10 43240522 43270666 + MGP_CBAJ_P0024730 Ppil6 protein_coding protein_coding MGP_CBAJ_T0012292.1 MGP_CBAJ_G0010404.1 mouse_genomes_project 10 113502550 113503546 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0027221.1 MGP_CBAJ_G0017609.1 mouse_genomes_project 10 142497856 142526775 - MGP_CBAJ_P0027221 Rab5b protein_coding protein_coding MGP_CBAJ_T0101525.1 MGP_CBAJ_G0039557.1 mouse_genomes_project 10 143553735 143554498 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0026922.1 MGP_CBAJ_G0017511.1 mouse_genomes_project 10 133735408 133811150 + MGP_CBAJ_P0026922 Wif1 protein_coding protein_coding MGP_CBAJ_T0026923.1 MGP_CBAJ_G0017511.1 mouse_genomes_project 10 133735472 133811146 + MGP_CBAJ_P0026923 Wif1 protein_coding protein_coding MGP_CBAJ_T0026924.1 MGP_CBAJ_G0017511.1 mouse_genomes_project 10 133794258 133811137 + Wif1 protein_coding retained_intron MGP_CBAJ_T0024801.1 MGP_CBAJ_G0016926.1 mouse_genomes_project 10 45243688 45440069 + MGP_CBAJ_P0024801 Pdss2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024802.1 MGP_CBAJ_G0016926.1 mouse_genomes_project 10 45243688 45477855 + MGP_CBAJ_P0024802 Pdss2 protein_coding protein_coding MGP_CBAJ_T0024803.1 MGP_CBAJ_G0016926.1 mouse_genomes_project 10 45243719 45380455 + Pdss2 protein_coding retained_intron MGP_CBAJ_T0024804.1 MGP_CBAJ_G0016926.1 mouse_genomes_project 10 45243802 45510327 + MGP_CBAJ_P0024804 Pdss2 protein_coding protein_coding MGP_CBAJ_T0024805.1 MGP_CBAJ_G0016926.1 mouse_genomes_project 10 45243938 45380052 + Pdss2 protein_coding retained_intron MGP_CBAJ_T0024806.1 MGP_CBAJ_G0016926.1 mouse_genomes_project 10 45428779 45477501 + MGP_CBAJ_P0024806 Pdss2 protein_coding protein_coding MGP_CBAJ_T0027097.1 MGP_CBAJ_G0017565.1 mouse_genomes_project 10 141304647 141310515 + MGP_CBAJ_P0027097 Zbtb39 protein_coding protein_coding MGP_CBAJ_T0101522.1 MGP_CBAJ_G0039554.1 mouse_genomes_project 10 143225095 143225302 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0025138.1 MGP_CBAJ_G0017033.1 mouse_genomes_project 10 66549264 66592247 - MGP_CBAJ_P0025138 Srgn protein_coding protein_coding MGP_CBAJ_T0025139.1 MGP_CBAJ_G0017033.1 mouse_genomes_project 10 66549859 66572621 - MGP_CBAJ_P0025139 Srgn protein_coding protein_coding MGP_CBAJ_T0025140.1 MGP_CBAJ_G0017033.1 mouse_genomes_project 10 66550115 66572804 - MGP_CBAJ_P0025140 Srgn protein_coding protein_coding MGP_CBAJ_T0025141.1 MGP_CBAJ_G0017033.1 mouse_genomes_project 10 66556987 66592221 - MGP_CBAJ_P0025141 Srgn protein_coding protein_coding MGP_CBAJ_T0025142.1 MGP_CBAJ_G0017033.1 mouse_genomes_project 10 66572541 66572963 - MGP_CBAJ_P0025142 Srgn protein_coding protein_coding MGP_CBAJ_T0025143.1 MGP_CBAJ_G0017033.1 mouse_genomes_project 10 66572607 66592221 - Srgn protein_coding processed_transcript MGP_CBAJ_T0101015.1 MGP_CBAJ_G0039255.1 mouse_genomes_project 10 29181408 29220820 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101016.1 MGP_CBAJ_G0039255.1 mouse_genomes_project 10 29220381 29224360 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0026149.1 MGP_CBAJ_G0017292.1 mouse_genomes_project 10 88232073 88235998 + MGP_CBAJ_P0026149 Dohh protein_coding protein_coding MGP_CBAJ_T0026150.1 MGP_CBAJ_G0017292.1 mouse_genomes_project 10 88232104 88235097 + MGP_CBAJ_P0026150 Dohh protein_coding protein_coding MGP_CBAJ_T0026151.1 MGP_CBAJ_G0017292.1 mouse_genomes_project 10 88232111 88239206 + MGP_CBAJ_P0026151 Dohh protein_coding nonsense_mediated_decay MGP_CBAJ_T0026152.1 MGP_CBAJ_G0017292.1 mouse_genomes_project 10 88232112 88233747 + Dohh protein_coding retained_intron MGP_CBAJ_T0026153.1 MGP_CBAJ_G0017292.1 mouse_genomes_project 10 88232540 88233640 + MGP_CBAJ_P0026153 Dohh protein_coding protein_coding MGP_CBAJ_T0026154.1 MGP_CBAJ_G0017292.1 mouse_genomes_project 10 88233266 88235327 + MGP_CBAJ_P0026154 Dohh protein_coding protein_coding MGP_CBAJ_T0026155.1 MGP_CBAJ_G0017292.1 mouse_genomes_project 10 88234962 88238504 + MGP_CBAJ_P0026155 Dohh protein_coding protein_coding MGP_CBAJ_T0026156.1 MGP_CBAJ_G0017292.1 mouse_genomes_project 10 88236650 88238913 + Dohh protein_coding processed_transcript MGP_CBAJ_T0026157.1 MGP_CBAJ_G0017292.1 mouse_genomes_project 10 88237974 88238781 + Dohh protein_coding retained_intron MGP_CBAJ_T0005997.1 MGP_CBAJ_G0005012.1 mouse_genomes_project 10 23784893 23795646 + lincRNA lincRNA MGP_CBAJ_T0026949.1 MGP_CBAJ_G0017521.1 mouse_genomes_project 10 135314748 135319703 + MGP_CBAJ_P0026949 Avpr1a protein_coding protein_coding MGP_CBAJ_T0027103.1 MGP_CBAJ_G0017570.1 mouse_genomes_project 10 141344990 141437003 + MGP_CBAJ_P0027103 protein_coding protein_coding MGP_CBAJ_T0027104.1 MGP_CBAJ_G0017570.1 mouse_genomes_project 10 141381992 141436209 + MGP_CBAJ_P0027104 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027105.1 MGP_CBAJ_G0017570.1 mouse_genomes_project 10 141381993 141473355 + MGP_CBAJ_P0027105 protein_coding nonsense_mediated_decay MGP_CBAJ_T0101252.1 MGP_CBAJ_G0039389.1 mouse_genomes_project 10 21359528 21396204 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101253.1 MGP_CBAJ_G0039389.1 mouse_genomes_project 10 21395037 21402695 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0026832.1 MGP_CBAJ_G0017483.1 mouse_genomes_project 10 128840949 128881810 + MGP_CBAJ_P0026832 Best3 protein_coding protein_coding MGP_CBAJ_T0026566.1 MGP_CBAJ_G0017389.1 mouse_genomes_project 10 102212558 102228494 + MGP_CBAJ_P0026566 4933408J17Rik protein_coding protein_coding MGP_CBAJ_T0024583.1 MGP_CBAJ_G0016855.1 mouse_genomes_project 10 31903924 31920472 + MGP_CBAJ_P0024583 Hddc2 protein_coding protein_coding MGP_CBAJ_T0024584.1 MGP_CBAJ_G0016855.1 mouse_genomes_project 10 31903947 31907575 + Hddc2 protein_coding retained_intron MGP_CBAJ_T0024585.1 MGP_CBAJ_G0016855.1 mouse_genomes_project 10 31903949 31908386 + Hddc2 protein_coding retained_intron MGP_CBAJ_T0024586.1 MGP_CBAJ_G0016855.1 mouse_genomes_project 10 31904014 31920452 + MGP_CBAJ_P0024586 Hddc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024587.1 MGP_CBAJ_G0016855.1 mouse_genomes_project 10 31910707 31920470 + Hddc2 protein_coding retained_intron MGP_CBAJ_T0011153.1 MGP_CBAJ_G0009291.1 mouse_genomes_project 10 100480453 100480615 - Gm27608 misc_RNA misc_RNA MGP_CBAJ_T0026586.1 MGP_CBAJ_G0017393.1 mouse_genomes_project 10 102619897 102660990 - MGP_CBAJ_P0026586 Vezt protein_coding protein_coding MGP_CBAJ_T0026587.1 MGP_CBAJ_G0017393.1 mouse_genomes_project 10 102648040 102727063 - MGP_CBAJ_P0026587 Vezt protein_coding protein_coding MGP_CBAJ_T0026588.1 MGP_CBAJ_G0017393.1 mouse_genomes_project 10 102654623 102726994 - MGP_CBAJ_P0026588 Vezt protein_coding protein_coding MGP_CBAJ_T0026589.1 MGP_CBAJ_G0017393.1 mouse_genomes_project 10 102657797 102726951 - MGP_CBAJ_P0026589 Vezt protein_coding protein_coding MGP_CBAJ_T0026590.1 MGP_CBAJ_G0017393.1 mouse_genomes_project 10 102658254 102726988 - MGP_CBAJ_P0026590 Vezt protein_coding protein_coding MGP_CBAJ_T0026591.1 MGP_CBAJ_G0017393.1 mouse_genomes_project 10 102660043 102726951 - MGP_CBAJ_P0026591 Vezt protein_coding unknown_likely_coding MGP_CBAJ_T0026592.1 MGP_CBAJ_G0017393.1 mouse_genomes_project 10 102673770 102686070 - MGP_CBAJ_P0026592 Vezt protein_coding nonsense_mediated_decay MGP_CBAJ_T0026593.1 MGP_CBAJ_G0017393.1 mouse_genomes_project 10 102676466 102727023 - MGP_CBAJ_P0026593 Vezt protein_coding nonsense_mediated_decay MGP_CBAJ_T0026594.1 MGP_CBAJ_G0017393.1 mouse_genomes_project 10 102682610 102727047 - MGP_CBAJ_P0026594 Vezt protein_coding protein_coding MGP_CBAJ_T0026595.1 MGP_CBAJ_G0017393.1 mouse_genomes_project 10 102686006 102709682 - MGP_CBAJ_P0026595 Vezt protein_coding protein_coding MGP_CBAJ_T0026596.1 MGP_CBAJ_G0017393.1 mouse_genomes_project 10 102690867 102726995 - Vezt protein_coding retained_intron MGP_CBAJ_T0026597.1 MGP_CBAJ_G0017393.1 mouse_genomes_project 10 102693040 102726913 - Vezt protein_coding processed_transcript MGP_CBAJ_T0009498.1 MGP_CBAJ_G0007636.1 mouse_genomes_project 10 101070872 101070966 + Gm22582 miRNA miRNA MGP_CBAJ_T0027256.1 MGP_CBAJ_G0017627.1 mouse_genomes_project 10 143022108 143023047 - MGP_CBAJ_P0027256 Olfr768 protein_coding protein_coding MGP_CBAJ_T0024653.1 MGP_CBAJ_G0016884.1 mouse_genomes_project 10 40604227 40618112 - MGP_CBAJ_P0024653 Wisp3 protein_coding protein_coding MGP_CBAJ_T0012259.1 MGP_CBAJ_G0010371.1 mouse_genomes_project 10 44207326 44207804 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0024527.1 MGP_CBAJ_G0016834.1 mouse_genomes_project 10 25944821 26059073 - MGP_CBAJ_P0024527 Tmem200a protein_coding protein_coding MGP_CBAJ_T0024601.1 MGP_CBAJ_G0016861.1 mouse_genomes_project 10 34610120 34626473 - MGP_CBAJ_P0024601 Sult3a2 protein_coding protein_coding MGP_CBAJ_T0027257.1 MGP_CBAJ_G0017628.1 mouse_genomes_project 10 143044254 143045338 - MGP_CBAJ_P0027257 Olfr769 protein_coding protein_coding MGP_CBAJ_T0012239.1 MGP_CBAJ_G0010351.1 mouse_genomes_project 10 5077827 5078557 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0024939.1 MGP_CBAJ_G0016979.1 mouse_genomes_project 10 61643370 61752530 + MGP_CBAJ_P0024939 Lims1 protein_coding protein_coding MGP_CBAJ_T0024940.1 MGP_CBAJ_G0016979.1 mouse_genomes_project 10 61718815 61749622 + MGP_CBAJ_P0024940 Lims1 protein_coding protein_coding MGP_CBAJ_T0024941.1 MGP_CBAJ_G0016979.1 mouse_genomes_project 10 61718830 61749417 + MGP_CBAJ_P0024941 Lims1 protein_coding protein_coding MGP_CBAJ_T0024942.1 MGP_CBAJ_G0016979.1 mouse_genomes_project 10 61736068 61738348 + Lims1 protein_coding processed_transcript MGP_CBAJ_T0024943.1 MGP_CBAJ_G0016979.1 mouse_genomes_project 10 61744494 61749503 + Lims1 protein_coding processed_transcript MGP_CBAJ_T0006007.1 MGP_CBAJ_G0005022.1 mouse_genomes_project 10 64642523 64655199 - Pldi lincRNA lincRNA MGP_CBAJ_T0025917.1 MGP_CBAJ_G0017228.1 mouse_genomes_project 10 86922065 86925481 + MGP_CBAJ_P0025917 Rps15 protein_coding protein_coding MGP_CBAJ_T0025918.1 MGP_CBAJ_G0017228.1 mouse_genomes_project 10 86922257 86925454 + MGP_CBAJ_P0025918 Rps15 protein_coding protein_coding MGP_CBAJ_T0099873.1 MGP_CBAJ_G0038128.1 mouse_genomes_project 10 104898124 104898257 + Gm24433 snoRNA snoRNA MGP_CBAJ_T0024098.1 MGP_CBAJ_G0016712.1 mouse_genomes_project 10 1514427 1539581 + MGP_CBAJ_P0024098 Armt1 protein_coding protein_coding MGP_CBAJ_T0024099.1 MGP_CBAJ_G0016712.1 mouse_genomes_project 10 1514427 1539582 + MGP_CBAJ_P0024099 Armt1 protein_coding protein_coding MGP_CBAJ_T0024100.1 MGP_CBAJ_G0016712.1 mouse_genomes_project 10 1514483 1521731 + MGP_CBAJ_P0024100 Armt1 protein_coding protein_coding MGP_CBAJ_T0024101.1 MGP_CBAJ_G0016712.1 mouse_genomes_project 10 1514490 1534852 + Armt1 protein_coding processed_transcript MGP_CBAJ_T0024102.1 MGP_CBAJ_G0016712.1 mouse_genomes_project 10 1514498 1516932 + Armt1 protein_coding retained_intron MGP_CBAJ_T0024103.1 MGP_CBAJ_G0016712.1 mouse_genomes_project 10 1514503 1538399 + MGP_CBAJ_P0024103 Armt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024104.1 MGP_CBAJ_G0016712.1 mouse_genomes_project 10 1516338 1522227 + Armt1 protein_coding processed_transcript MGP_CBAJ_T0098645.1 MGP_CBAJ_G0036900.1 mouse_genomes_project 10 98657476 98657571 + Gm22602 snRNA snRNA MGP_CBAJ_T0099865.1 MGP_CBAJ_G0038120.1 mouse_genomes_project 10 77339653 77339784 + Gm22937 snoRNA snoRNA MGP_CBAJ_T0098622.1 MGP_CBAJ_G0036877.1 mouse_genomes_project 10 49295016 49295178 - Gm25650 snRNA snRNA MGP_CBAJ_T0026834.1 MGP_CBAJ_G0017485.1 mouse_genomes_project 10 128917639 128930470 - MGP_CBAJ_P0026834 Cct2 protein_coding protein_coding MGP_CBAJ_T0024880.1 MGP_CBAJ_G0016959.1 mouse_genomes_project 10 55751353 56217638 + MGP_CBAJ_P0024880 Slc35f1 protein_coding protein_coding MGP_CBAJ_T0026225.1 MGP_CBAJ_G0017304.1 mouse_genomes_project 10 88528702 88534447 - MGP_CBAJ_P0026225 Sirt6 protein_coding protein_coding MGP_CBAJ_T0026226.1 MGP_CBAJ_G0017304.1 mouse_genomes_project 10 88532436 88534476 - Sirt6 protein_coding retained_intron MGP_CBAJ_T0002946.1 MGP_CBAJ_G0002759.1 mouse_genomes_project 10 20294506 20305508 + Gm26577 antisense antisense MGP_CBAJ_T0027019.1 MGP_CBAJ_G0017545.1 mouse_genomes_project 10 140693561 140738447 - MGP_CBAJ_P0027019 Kif5a protein_coding unknown_likely_coding MGP_CBAJ_T0026988.1 MGP_CBAJ_G0017534.1 mouse_genomes_project 10 140468157 140472883 + MGP_CBAJ_P0026988 Cyp27b1 protein_coding protein_coding MGP_CBAJ_T0026989.1 MGP_CBAJ_G0017534.1 mouse_genomes_project 10 140468157 140472920 + MGP_CBAJ_P0026989 Cyp27b1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026990.1 MGP_CBAJ_G0017534.1 mouse_genomes_project 10 140468578 140469774 + Cyp27b1 protein_coding processed_transcript MGP_CBAJ_T0012254.1 MGP_CBAJ_G0010366.1 mouse_genomes_project 10 26764270 26765282 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0026619.1 MGP_CBAJ_G0017400.1 mouse_genomes_project 10 103599588 103773010 - MGP_CBAJ_P0026619 Plxnc1 protein_coding protein_coding MGP_CBAJ_T0026620.1 MGP_CBAJ_G0017400.1 mouse_genomes_project 10 103647950 103654542 - Plxnc1 protein_coding retained_intron MGP_CBAJ_T0026621.1 MGP_CBAJ_G0017400.1 mouse_genomes_project 10 103665174 103681607 - MGP_CBAJ_P0026621 Plxnc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026622.1 MGP_CBAJ_G0017400.1 mouse_genomes_project 10 103681388 103745376 - Plxnc1 protein_coding retained_intron MGP_CBAJ_T0027137.1 MGP_CBAJ_G0017582.1 mouse_genomes_project 10 141911193 141926892 + MGP_CBAJ_P0027137 Gls2 protein_coding protein_coding MGP_CBAJ_T0027138.1 MGP_CBAJ_G0017582.1 mouse_genomes_project 10 141911358 141916289 + MGP_CBAJ_P0027138 Gls2 protein_coding protein_coding MGP_CBAJ_T0027139.1 MGP_CBAJ_G0017582.1 mouse_genomes_project 10 141911440 141926887 + MGP_CBAJ_P0027139 Gls2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027140.1 MGP_CBAJ_G0017582.1 mouse_genomes_project 10 141911443 141916666 + Gls2 protein_coding processed_transcript MGP_CBAJ_T0027141.1 MGP_CBAJ_G0017582.1 mouse_genomes_project 10 141911447 141926957 + MGP_CBAJ_P0027141 Gls2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027142.1 MGP_CBAJ_G0017582.1 mouse_genomes_project 10 141911469 141926887 + MGP_CBAJ_P0027142 Gls2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027143.1 MGP_CBAJ_G0017582.1 mouse_genomes_project 10 141911527 141916824 + Gls2 protein_coding retained_intron MGP_CBAJ_T0027144.1 MGP_CBAJ_G0017582.1 mouse_genomes_project 10 141920208 141921144 + Gls2 protein_coding retained_intron MGP_CBAJ_T0027145.1 MGP_CBAJ_G0017582.1 mouse_genomes_project 10 141920635 141923958 + Gls2 protein_coding processed_transcript MGP_CBAJ_T0027146.1 MGP_CBAJ_G0017582.1 mouse_genomes_project 10 141920716 141926895 + Gls2 protein_coding retained_intron MGP_CBAJ_T0027147.1 MGP_CBAJ_G0017582.1 mouse_genomes_project 10 141923879 141926683 + MGP_CBAJ_P0027147 Gls2 protein_coding protein_coding MGP_CBAJ_T0025136.1 MGP_CBAJ_G0017032.1 mouse_genomes_project 10 66501219 66539341 - MGP_CBAJ_P0025136 Vps26a protein_coding protein_coding MGP_CBAJ_T0025137.1 MGP_CBAJ_G0017032.1 mouse_genomes_project 10 66501219 66539134 - MGP_CBAJ_P0025137 Vps26a protein_coding protein_coding MGP_CBAJ_T0027244.1 MGP_CBAJ_G0017622.1 mouse_genomes_project 10 142788599 142794280 - MGP_CBAJ_P0027244 Bloc1s1 protein_coding protein_coding MGP_CBAJ_T0027247.1 MGP_CBAJ_G0017622.1 mouse_genomes_project 10 142790631 142794280 - MGP_CBAJ_P0027247 Bloc1s1 protein_coding protein_coding MGP_CBAJ_T0027248.1 MGP_CBAJ_G0017622.1 mouse_genomes_project 10 142790664 142794791 - MGP_CBAJ_P0027248 Bloc1s1 protein_coding protein_coding MGP_CBAJ_T0027249.1 MGP_CBAJ_G0017622.1 mouse_genomes_project 10 142790760 142793782 - Bloc1s1 protein_coding processed_transcript MGP_CBAJ_T0027250.1 MGP_CBAJ_G0017622.1 mouse_genomes_project 10 142793271 142794280 - Bloc1s1 protein_coding retained_intron MGP_CBAJ_T0012268.1 MGP_CBAJ_G0010380.1 mouse_genomes_project 10 61214701 61215257 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0026774.1 MGP_CBAJ_G0017463.1 mouse_genomes_project 10 124203920 124207492 - MGP_CBAJ_P0026774 Atxn7l3b protein_coding protein_coding MGP_CBAJ_T0026775.1 MGP_CBAJ_G0017463.1 mouse_genomes_project 10 124206285 124207498 - Atxn7l3b protein_coding processed_transcript MGP_CBAJ_T0026110.1 MGP_CBAJ_G0017283.1 mouse_genomes_project 10 88103405 88124156 - MGP_CBAJ_P0026110 Tjp3 protein_coding protein_coding MGP_CBAJ_T0026372.1 MGP_CBAJ_G0017347.1 mouse_genomes_project 10 94420038 94500252 + MGP_CBAJ_P0026372 Ttc41 protein_coding protein_coding MGP_CBAJ_T0026373.1 MGP_CBAJ_G0017347.1 mouse_genomes_project 10 94420038 94438435 + MGP_CBAJ_P0026373 Ttc41 protein_coding protein_coding MGP_CBAJ_T0024987.1 MGP_CBAJ_G0016996.1 mouse_genomes_project 10 63505893 63531077 - MGP_CBAJ_P0024987 Anapc16 protein_coding protein_coding MGP_CBAJ_T0024988.1 MGP_CBAJ_G0016996.1 mouse_genomes_project 10 63506392 63531053 - MGP_CBAJ_P0024988 Anapc16 protein_coding protein_coding MGP_CBAJ_T0024989.1 MGP_CBAJ_G0016996.1 mouse_genomes_project 10 63506888 63508868 - Anapc16 protein_coding processed_transcript MGP_CBAJ_T0024990.1 MGP_CBAJ_G0016996.1 mouse_genomes_project 10 63506907 63530937 - MGP_CBAJ_P0024990 Anapc16 protein_coding protein_coding MGP_CBAJ_T0024991.1 MGP_CBAJ_G0016996.1 mouse_genomes_project 10 63506963 63531028 - MGP_CBAJ_P0024991 Anapc16 protein_coding protein_coding MGP_CBAJ_T0024992.1 MGP_CBAJ_G0016996.1 mouse_genomes_project 10 63507070 63530711 - MGP_CBAJ_P0024992 Anapc16 protein_coding protein_coding MGP_CBAJ_T0024993.1 MGP_CBAJ_G0016996.1 mouse_genomes_project 10 63508850 63509565 - Anapc16 protein_coding retained_intron MGP_CBAJ_T0024994.1 MGP_CBAJ_G0016996.1 mouse_genomes_project 10 63518381 63520841 - Anapc16 protein_coding retained_intron MGP_CBAJ_T0012255.1 MGP_CBAJ_G0010367.1 mouse_genomes_project 10 32189653 32190267 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0026391.1 MGP_CBAJ_G0017354.1 mouse_genomes_project 10 95718116 95790700 + MGP_CBAJ_P0026391 Igf1 protein_coding protein_coding MGP_CBAJ_T0026392.1 MGP_CBAJ_G0017354.1 mouse_genomes_project 10 95718916 95796840 + MGP_CBAJ_P0026392 Igf1 protein_coding protein_coding MGP_CBAJ_T0026393.1 MGP_CBAJ_G0017354.1 mouse_genomes_project 10 95719106 95791606 + MGP_CBAJ_P0026393 Igf1 protein_coding protein_coding MGP_CBAJ_T0026394.1 MGP_CBAJ_G0017354.1 mouse_genomes_project 10 95719338 95790698 + MGP_CBAJ_P0026394 Igf1 protein_coding protein_coding MGP_CBAJ_T0026395.1 MGP_CBAJ_G0017354.1 mouse_genomes_project 10 95719459 95775163 + MGP_CBAJ_P0026395 Igf1 protein_coding protein_coding MGP_CBAJ_T0026396.1 MGP_CBAJ_G0017354.1 mouse_genomes_project 10 95719878 95775706 + MGP_CBAJ_P0026396 Igf1 protein_coding protein_coding MGP_CBAJ_T0026397.1 MGP_CBAJ_G0017354.1 mouse_genomes_project 10 95720454 95790704 + MGP_CBAJ_P0026397 Igf1 protein_coding protein_coding MGP_CBAJ_T0026398.1 MGP_CBAJ_G0017354.1 mouse_genomes_project 10 95721177 95790682 + MGP_CBAJ_P0026398 Igf1 protein_coding protein_coding MGP_CBAJ_T0024481.1 MGP_CBAJ_G0016815.1 mouse_genomes_project 10 23594866 23596823 + MGP_CBAJ_P0024481 Taar7b protein_coding protein_coding MGP_CBAJ_T0002968.1 MGP_CBAJ_G0002775.1 mouse_genomes_project 10 66647572 66648948 + 4933428P19Rik antisense antisense MGP_CBAJ_T0027233.1 MGP_CBAJ_G0017616.1 mouse_genomes_project 10 142657662 142672861 + MGP_CBAJ_P0027233 Dnajc14 protein_coding unknown_likely_coding MGP_CBAJ_T0025722.1 MGP_CBAJ_G0017184.1 mouse_genomes_project 10 86173831 86181846 - MGP_CBAJ_P0025722 Odf3l2 protein_coding protein_coding MGP_CBAJ_T0027173.1 MGP_CBAJ_G0017594.1 mouse_genomes_project 10 142135128 142143318 + Ankrd52 protein_coding retained_intron MGP_CBAJ_T0027174.1 MGP_CBAJ_G0017594.1 mouse_genomes_project 10 142135132 142151826 + MGP_CBAJ_P0027174 Ankrd52 protein_coding protein_coding MGP_CBAJ_T0027175.1 MGP_CBAJ_G0017594.1 mouse_genomes_project 10 142147106 142166498 + MGP_CBAJ_P0027175 Ankrd52 protein_coding protein_coding MGP_CBAJ_T0006023.1 MGP_CBAJ_G0005034.1 mouse_genomes_project 10 83655796 83686984 + 2810425M01Rik lincRNA lincRNA MGP_CBAJ_T0026311.1 MGP_CBAJ_G0017326.1 mouse_genomes_project 10 91996504 92004088 - MGP_CBAJ_P0026311 Ckap4 protein_coding protein_coding MGP_CBAJ_T0026312.1 MGP_CBAJ_G0017326.1 mouse_genomes_project 10 91996835 92004236 - MGP_CBAJ_P0026312 Ckap4 protein_coding protein_coding MGP_CBAJ_T0026030.1 MGP_CBAJ_G0017259.1 mouse_genomes_project 10 87587912 87590293 - MGP_CBAJ_P0026030 Gm10146 protein_coding protein_coding MGP_CBAJ_T0024652.1 MGP_CBAJ_G0016883.1 mouse_genomes_project 10 40583517 40604315 + MGP_CBAJ_P0024652 Tube1 protein_coding protein_coding MGP_CBAJ_T0026280.1 MGP_CBAJ_G0017319.1 mouse_genomes_project 10 90529288 90652649 - MGP_CBAJ_P0026280 Slc41a2 protein_coding protein_coding MGP_CBAJ_T0026281.1 MGP_CBAJ_G0017319.1 mouse_genomes_project 10 90611918 90615244 - Slc41a2 protein_coding processed_transcript MGP_CBAJ_T0026282.1 MGP_CBAJ_G0017319.1 mouse_genomes_project 10 90629137 90635796 - MGP_CBAJ_P0026282 Slc41a2 protein_coding protein_coding MGP_CBAJ_T0026283.1 MGP_CBAJ_G0017319.1 mouse_genomes_project 10 90629264 90652207 - MGP_CBAJ_P0026283 Slc41a2 protein_coding protein_coding MGP_CBAJ_T0026284.1 MGP_CBAJ_G0017319.1 mouse_genomes_project 10 90629494 90648045 - MGP_CBAJ_P0026284 Slc41a2 protein_coding protein_coding MGP_CBAJ_T0025020.1 MGP_CBAJ_G0017002.1 mouse_genomes_project 10 63942245 63971365 + MGP_CBAJ_P0025020 Vsir protein_coding protein_coding MGP_CBAJ_T0025021.1 MGP_CBAJ_G0017002.1 mouse_genomes_project 10 63942299 63957034 + Vsir protein_coding processed_transcript MGP_CBAJ_T0025022.1 MGP_CBAJ_G0017002.1 mouse_genomes_project 10 63942301 63956816 + Vsir protein_coding processed_transcript MGP_CBAJ_T0025023.1 MGP_CBAJ_G0017002.1 mouse_genomes_project 10 63942378 63957744 + Vsir protein_coding retained_intron MGP_CBAJ_T0025024.1 MGP_CBAJ_G0017002.1 mouse_genomes_project 10 63942406 63966449 + MGP_CBAJ_P0025024 Vsir protein_coding protein_coding MGP_CBAJ_T0025025.1 MGP_CBAJ_G0017002.1 mouse_genomes_project 10 63942416 63967620 + MGP_CBAJ_P0025025 Vsir protein_coding protein_coding MGP_CBAJ_T0026346.1 MGP_CBAJ_G0017340.1 mouse_genomes_project 10 93546637 93568661 - MGP_CBAJ_P0026346 Rtcb protein_coding protein_coding MGP_CBAJ_T0026347.1 MGP_CBAJ_G0017340.1 mouse_genomes_project 10 93556861 93566761 - Rtcb protein_coding retained_intron MGP_CBAJ_T0024667.1 MGP_CBAJ_G0016887.1 mouse_genomes_project 10 41251090 41402299 + MGP_CBAJ_P0024667 Rev3l protein_coding protein_coding MGP_CBAJ_T0024668.1 MGP_CBAJ_G0016887.1 mouse_genomes_project 10 41251099 41402256 + MGP_CBAJ_P0024668 Rev3l protein_coding nonsense_mediated_decay MGP_CBAJ_T0024669.1 MGP_CBAJ_G0016887.1 mouse_genomes_project 10 41251336 41402294 + MGP_CBAJ_P0024669 Rev3l protein_coding protein_coding MGP_CBAJ_T0024670.1 MGP_CBAJ_G0016887.1 mouse_genomes_project 10 41350451 41402296 + MGP_CBAJ_P0024670 Rev3l protein_coding nonsense_mediated_decay MGP_CBAJ_T0024671.1 MGP_CBAJ_G0016887.1 mouse_genomes_project 10 41353594 41369911 + Rev3l protein_coding retained_intron MGP_CBAJ_T0024672.1 MGP_CBAJ_G0016887.1 mouse_genomes_project 10 41386012 41390058 + Rev3l protein_coding retained_intron MGP_CBAJ_T0024673.1 MGP_CBAJ_G0016887.1 mouse_genomes_project 10 41394196 41401576 + Rev3l protein_coding retained_intron MGP_CBAJ_T0025760.1 MGP_CBAJ_G0017198.1 mouse_genomes_project 10 86410947 86423531 + MGP_CBAJ_P0025760 Ptbp1 protein_coding protein_coding MGP_CBAJ_T0025761.1 MGP_CBAJ_G0017198.1 mouse_genomes_project 10 86411125 86416233 + Ptbp1 protein_coding retained_intron MGP_CBAJ_T0025762.1 MGP_CBAJ_G0017198.1 mouse_genomes_project 10 86411149 86423881 + MGP_CBAJ_P0025762 Ptbp1 protein_coding protein_coding MGP_CBAJ_T0025763.1 MGP_CBAJ_G0017198.1 mouse_genomes_project 10 86411153 86422917 + Ptbp1 protein_coding retained_intron MGP_CBAJ_T0025764.1 MGP_CBAJ_G0017198.1 mouse_genomes_project 10 86411161 86416134 + Ptbp1 protein_coding processed_transcript MGP_CBAJ_T0025765.1 MGP_CBAJ_G0017198.1 mouse_genomes_project 10 86411172 86419945 + MGP_CBAJ_P0025765 Ptbp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025766.1 MGP_CBAJ_G0017198.1 mouse_genomes_project 10 86411185 86415535 + MGP_CBAJ_P0025766 Ptbp1 protein_coding protein_coding MGP_CBAJ_T0025767.1 MGP_CBAJ_G0017198.1 mouse_genomes_project 10 86411187 86415565 + Ptbp1 protein_coding processed_transcript MGP_CBAJ_T0025768.1 MGP_CBAJ_G0017198.1 mouse_genomes_project 10 86411187 86415885 + MGP_CBAJ_P0025768 Ptbp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025769.1 MGP_CBAJ_G0017198.1 mouse_genomes_project 10 86411188 86423458 + MGP_CBAJ_P0025769 Ptbp1 protein_coding protein_coding MGP_CBAJ_T0025770.1 MGP_CBAJ_G0017198.1 mouse_genomes_project 10 86411234 86421199 + MGP_CBAJ_P0025770 Ptbp1 protein_coding unknown_likely_coding MGP_CBAJ_T0025771.1 MGP_CBAJ_G0017198.1 mouse_genomes_project 10 86411558 86415617 + MGP_CBAJ_P0025771 Ptbp1 protein_coding protein_coding MGP_CBAJ_T0025772.1 MGP_CBAJ_G0017198.1 mouse_genomes_project 10 86415292 86415908 + MGP_CBAJ_P0025772 Ptbp1 protein_coding protein_coding MGP_CBAJ_T0025773.1 MGP_CBAJ_G0017198.1 mouse_genomes_project 10 86415514 86416646 + Ptbp1 protein_coding retained_intron MGP_CBAJ_T0025774.1 MGP_CBAJ_G0017198.1 mouse_genomes_project 10 86416170 86419574 + MGP_CBAJ_P0025774 Ptbp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025776.1 MGP_CBAJ_G0017198.1 mouse_genomes_project 10 86418258 86419571 + Ptbp1 protein_coding retained_intron MGP_CBAJ_T0025777.1 MGP_CBAJ_G0017198.1 mouse_genomes_project 10 86418537 86423531 + Ptbp1 protein_coding retained_intron MGP_CBAJ_T0024611.1 MGP_CBAJ_G0016869.1 mouse_genomes_project 10 34968496 34973664 - MGP_CBAJ_P0024611 Fam26e protein_coding protein_coding MGP_CBAJ_T0099874.1 MGP_CBAJ_G0038129.1 mouse_genomes_project 10 106979242 106979370 - Gm25658 snoRNA snoRNA MGP_CBAJ_T0009512.1 MGP_CBAJ_G0007650.1 mouse_genomes_project 10 134420387 134420463 - Gm24330 miRNA miRNA MGP_CBAJ_T0098618.1 MGP_CBAJ_G0036873.1 mouse_genomes_project 10 46787303 46787391 - Gm22087 snRNA snRNA MGP_CBAJ_T0025321.1 MGP_CBAJ_G0017071.1 mouse_genomes_project 10 75736754 75871974 + MGP_CBAJ_P0025321 Fam13c protein_coding protein_coding MGP_CBAJ_T0025322.1 MGP_CBAJ_G0017071.1 mouse_genomes_project 10 75736966 75871974 + MGP_CBAJ_P0025322 Fam13c protein_coding protein_coding MGP_CBAJ_T0025323.1 MGP_CBAJ_G0017071.1 mouse_genomes_project 10 75737012 75871976 + MGP_CBAJ_P0025323 Fam13c protein_coding protein_coding MGP_CBAJ_T0025654.1 MGP_CBAJ_G0017152.1 mouse_genomes_project 10 84483356 84491058 - MGP_CBAJ_P0025654 D10Jhu81e protein_coding protein_coding MGP_CBAJ_T0027262.1 MGP_CBAJ_G0017630.1 mouse_genomes_project 10 143091373 143092327 - MGP_CBAJ_P0027262 Olfr771 protein_coding protein_coding MGP_CBAJ_T0025608.1 MGP_CBAJ_G0017137.1 mouse_genomes_project 10 83904702 83905255 + MGP_CBAJ_P0025608 Gm10024 protein_coding protein_coding MGP_CBAJ_T0099880.1 MGP_CBAJ_G0038135.1 mouse_genomes_project 10 118898473 118898607 + Gm23105 snoRNA snoRNA MGP_CBAJ_T0098607.1 MGP_CBAJ_G0036862.1 mouse_genomes_project 10 12074970 12075063 - Gm22995 snRNA snRNA MGP_CBAJ_T0011148.1 MGP_CBAJ_G0009286.1 mouse_genomes_project 10 75809808 75810120 - Gm22320 misc_RNA misc_RNA MGP_CBAJ_T0098610.1 MGP_CBAJ_G0036865.1 mouse_genomes_project 10 24669154 24669261 + Gm23410 snRNA snRNA MGP_CBAJ_T0024489.1 MGP_CBAJ_G0016823.1 mouse_genomes_project 10 23754107 23755154 - MGP_CBAJ_P0024489 Taar9 protein_coding protein_coding MGP_CBAJ_T0006028.1 MGP_CBAJ_G0005037.1 mouse_genomes_project 10 87395997 87403851 + Gm26541 lincRNA lincRNA MGP_CBAJ_T0024386.1 MGP_CBAJ_G0016782.1 mouse_genomes_project 10 18826031 18829574 - MGP_CBAJ_P0024386 Slc35d3 protein_coding protein_coding MGP_CBAJ_T0025246.1 MGP_CBAJ_G0017062.1 mouse_genomes_project 10 73009303 73208965 - MGP_CBAJ_P0025246 Arid5b protein_coding protein_coding MGP_CBAJ_T0026173.1 MGP_CBAJ_G0017296.1 mouse_genomes_project 10 88365224 88375368 - MGP_CBAJ_P0026173 Ncln protein_coding protein_coding MGP_CBAJ_T0026174.1 MGP_CBAJ_G0017296.1 mouse_genomes_project 10 88365432 88375302 - MGP_CBAJ_P0026174 Ncln protein_coding protein_coding MGP_CBAJ_T0026175.1 MGP_CBAJ_G0017296.1 mouse_genomes_project 10 88366073 88367373 - Ncln protein_coding retained_intron MGP_CBAJ_T0026176.1 MGP_CBAJ_G0017296.1 mouse_genomes_project 10 88366265 88367193 - MGP_CBAJ_P0026176 Ncln protein_coding protein_coding MGP_CBAJ_T0026177.1 MGP_CBAJ_G0017296.1 mouse_genomes_project 10 88366315 88367619 - Ncln protein_coding retained_intron MGP_CBAJ_T0026178.1 MGP_CBAJ_G0017296.1 mouse_genomes_project 10 88366355 88367617 - Ncln protein_coding retained_intron MGP_CBAJ_T0026179.1 MGP_CBAJ_G0017296.1 mouse_genomes_project 10 88367201 88369244 - Ncln protein_coding retained_intron MGP_CBAJ_T0026180.1 MGP_CBAJ_G0017296.1 mouse_genomes_project 10 88369900 88371031 - Ncln protein_coding retained_intron MGP_CBAJ_T0026181.1 MGP_CBAJ_G0017296.1 mouse_genomes_project 10 88372298 88375318 - Ncln protein_coding retained_intron MGP_CBAJ_T0024735.1 MGP_CBAJ_G0016911.1 mouse_genomes_project 10 43305878 43319882 - Ccdc162 protein_coding processed_transcript MGP_CBAJ_T0024736.1 MGP_CBAJ_G0016911.1 mouse_genomes_project 10 43305881 43376683 - MGP_CBAJ_P0024736 Ccdc162 protein_coding protein_coding MGP_CBAJ_T0024737.1 MGP_CBAJ_G0016911.1 mouse_genomes_project 10 43305881 43354996 - MGP_CBAJ_P0024737 Ccdc162 protein_coding protein_coding MGP_CBAJ_T0024738.1 MGP_CBAJ_G0016911.1 mouse_genomes_project 10 43306324 43497198 - MGP_CBAJ_P0024738 Ccdc162 protein_coding unknown_likely_coding MGP_CBAJ_T0024739.1 MGP_CBAJ_G0016911.1 mouse_genomes_project 10 43306447 43346243 - MGP_CBAJ_P0024739 Ccdc162 protein_coding protein_coding MGP_CBAJ_T0024740.1 MGP_CBAJ_G0016911.1 mouse_genomes_project 10 43315960 43327709 - Ccdc162 protein_coding retained_intron MGP_CBAJ_T0024741.1 MGP_CBAJ_G0016911.1 mouse_genomes_project 10 43317640 43496551 - MGP_CBAJ_P0024741 Ccdc162 protein_coding protein_coding MGP_CBAJ_T0024742.1 MGP_CBAJ_G0016911.1 mouse_genomes_project 10 43317759 43320450 - Ccdc162 protein_coding retained_intron MGP_CBAJ_T0024743.1 MGP_CBAJ_G0016911.1 mouse_genomes_project 10 43347260 43355246 - Ccdc162 protein_coding processed_transcript MGP_CBAJ_T0026863.1 MGP_CBAJ_G0017495.1 mouse_genomes_project 10 129776855 129787049 - MGP_CBAJ_P0026863 unknown_likely_coding unknown_likely_coding MGP_CBAJ_T0024746.1 MGP_CBAJ_G0016914.1 mouse_genomes_project 10 43509014 43608827 - MGP_CBAJ_P0024746 Cep57l1 protein_coding protein_coding MGP_CBAJ_T0024747.1 MGP_CBAJ_G0016914.1 mouse_genomes_project 10 43509019 43608821 - MGP_CBAJ_P0024747 Cep57l1 protein_coding protein_coding MGP_CBAJ_T0024748.1 MGP_CBAJ_G0016914.1 mouse_genomes_project 10 43509019 43608821 - MGP_CBAJ_P0024748 Cep57l1 protein_coding protein_coding MGP_CBAJ_T0024749.1 MGP_CBAJ_G0016914.1 mouse_genomes_project 10 43509868 43608861 - MGP_CBAJ_P0024749 Cep57l1 protein_coding protein_coding MGP_CBAJ_T0024750.1 MGP_CBAJ_G0016914.1 mouse_genomes_project 10 43510020 43608836 - MGP_CBAJ_P0024750 Cep57l1 protein_coding protein_coding MGP_CBAJ_T0024751.1 MGP_CBAJ_G0016914.1 mouse_genomes_project 10 43511348 43515775 - MGP_CBAJ_P0024751 Cep57l1 protein_coding protein_coding MGP_CBAJ_T0024752.1 MGP_CBAJ_G0016914.1 mouse_genomes_project 10 43518426 43525906 - Cep57l1 protein_coding retained_intron MGP_CBAJ_T0024753.1 MGP_CBAJ_G0016914.1 mouse_genomes_project 10 43521387 43547808 - Cep57l1 protein_coding retained_intron MGP_CBAJ_T0024754.1 MGP_CBAJ_G0016914.1 mouse_genomes_project 10 43545909 43608844 - Cep57l1 protein_coding retained_intron MGP_CBAJ_T0024757.1 MGP_CBAJ_G0016916.1 mouse_genomes_project 10 43731011 43850146 - MGP_CBAJ_P0024757 protein_coding protein_coding MGP_CBAJ_T0024758.1 MGP_CBAJ_G0016916.1 mouse_genomes_project 10 43731014 43800398 - protein_coding retained_intron MGP_CBAJ_T0024759.1 MGP_CBAJ_G0016916.1 mouse_genomes_project 10 43731021 43850102 - MGP_CBAJ_P0024759 protein_coding protein_coding MGP_CBAJ_T0024760.1 MGP_CBAJ_G0016916.1 mouse_genomes_project 10 43732054 43799776 - protein_coding retained_intron MGP_CBAJ_T0024761.1 MGP_CBAJ_G0016916.1 mouse_genomes_project 10 43732800 43850152 - MGP_CBAJ_P0024761 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024762.1 MGP_CBAJ_G0016916.1 mouse_genomes_project 10 43810267 43816851 - MGP_CBAJ_P0024762 protein_coding protein_coding MGP_CBAJ_T0024763.1 MGP_CBAJ_G0016916.1 mouse_genomes_project 10 43831525 43850100 - MGP_CBAJ_P0024763 protein_coding protein_coding MGP_CBAJ_T0024764.1 MGP_CBAJ_G0016916.1 mouse_genomes_project 10 43832066 43850102 - MGP_CBAJ_P0024764 protein_coding protein_coding MGP_CBAJ_T0006066.1 MGP_CBAJ_G0005059.1 mouse_genomes_project 10 123954573 124019991 + 1700010J16Rik lincRNA lincRNA MGP_CBAJ_T0006067.1 MGP_CBAJ_G0005059.1 mouse_genomes_project 10 123954611 124019994 + 1700010J16Rik lincRNA lincRNA MGP_CBAJ_T0009458.1 MGP_CBAJ_G0007596.1 mouse_genomes_project 10 43448315 43448370 + Mir3473b miRNA miRNA MGP_CBAJ_T0027222.1 MGP_CBAJ_G0017610.1 mouse_genomes_project 10 142528436 142539487 - MGP_CBAJ_P0027222 Cdk2 protein_coding protein_coding MGP_CBAJ_T0027223.1 MGP_CBAJ_G0017610.1 mouse_genomes_project 10 142528436 142539487 - MGP_CBAJ_P0027223 Cdk2 protein_coding protein_coding MGP_CBAJ_T0098253.1 MGP_CBAJ_G0036525.1 mouse_genomes_project 10 87282113 87283942 - Gm29093 sense_intronic sense_intronic MGP_CBAJ_T0024221.1 MGP_CBAJ_G0016740.1 mouse_genomes_project 10 7515538 7681653 - MGP_CBAJ_P0024221 Stxbp5 protein_coding protein_coding MGP_CBAJ_T0024222.1 MGP_CBAJ_G0016740.1 mouse_genomes_project 10 7519984 7681988 - MGP_CBAJ_P0024222 Stxbp5 protein_coding protein_coding MGP_CBAJ_T0024223.1 MGP_CBAJ_G0016740.1 mouse_genomes_project 10 7520022 7562694 - Stxbp5 protein_coding processed_transcript MGP_CBAJ_T0024224.1 MGP_CBAJ_G0016740.1 mouse_genomes_project 10 7520607 7542695 - Stxbp5 protein_coding retained_intron MGP_CBAJ_T0024225.1 MGP_CBAJ_G0016740.1 mouse_genomes_project 10 7520939 7681592 - MGP_CBAJ_P0024225 Stxbp5 protein_coding protein_coding MGP_CBAJ_T0024226.1 MGP_CBAJ_G0016740.1 mouse_genomes_project 10 7527120 7530542 - Stxbp5 protein_coding retained_intron MGP_CBAJ_T0024227.1 MGP_CBAJ_G0016740.1 mouse_genomes_project 10 7527123 7528970 - Stxbp5 protein_coding retained_intron MGP_CBAJ_T0024228.1 MGP_CBAJ_G0016740.1 mouse_genomes_project 10 7527230 7540670 - Stxbp5 protein_coding retained_intron MGP_CBAJ_T0024229.1 MGP_CBAJ_G0016740.1 mouse_genomes_project 10 7529458 7562854 - MGP_CBAJ_P0024229 Stxbp5 protein_coding protein_coding MGP_CBAJ_T0024230.1 MGP_CBAJ_G0016740.1 mouse_genomes_project 10 7529624 7540670 - Stxbp5 protein_coding retained_intron MGP_CBAJ_T0024231.1 MGP_CBAJ_G0016740.1 mouse_genomes_project 10 7551399 7562825 - Stxbp5 protein_coding retained_intron MGP_CBAJ_T0026753.1 MGP_CBAJ_G0017453.1 mouse_genomes_project 10 121807911 121887789 - MGP_CBAJ_P0026753 Zdhhc17 protein_coding protein_coding MGP_CBAJ_T0026754.1 MGP_CBAJ_G0017453.1 mouse_genomes_project 10 121829877 121887726 - MGP_CBAJ_P0026754 Zdhhc17 protein_coding protein_coding MGP_CBAJ_T0027318.1 MGP_CBAJ_G0017671.1 mouse_genomes_project 10 144206618 144229536 - MGP_CBAJ_P0027318 Olfr824 protein_coding protein_coding MGP_CBAJ_T0009451.1 MGP_CBAJ_G0007589.1 mouse_genomes_project 10 5340467 5340561 + Mir5104 miRNA miRNA MGP_CBAJ_T0026607.1 MGP_CBAJ_G0017397.1 mouse_genomes_project 10 103030178 103035189 - MGP_CBAJ_P0026607 protein_coding protein_coding MGP_CBAJ_T0026608.1 MGP_CBAJ_G0017397.1 mouse_genomes_project 10 103033507 103035093 - protein_coding retained_intron MGP_CBAJ_T0024190.1 MGP_CBAJ_G0016729.1 mouse_genomes_project 10 5148567 5159598 + MGP_CBAJ_P0024190 Nup43 protein_coding protein_coding MGP_CBAJ_T0024191.1 MGP_CBAJ_G0016729.1 mouse_genomes_project 10 5148578 5149358 + Nup43 protein_coding retained_intron MGP_CBAJ_T0024192.1 MGP_CBAJ_G0016729.1 mouse_genomes_project 10 5148604 5156794 + Nup43 protein_coding retained_intron MGP_CBAJ_T0024193.1 MGP_CBAJ_G0016729.1 mouse_genomes_project 10 5151509 5155968 + Nup43 protein_coding retained_intron MGP_CBAJ_T0012235.1 MGP_CBAJ_G0010347.1 mouse_genomes_project 10 807679 807988 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098651.1 MGP_CBAJ_G0036906.1 mouse_genomes_project 10 114483662 114483819 - Gm22945 snRNA snRNA MGP_CBAJ_T0002981.1 MGP_CBAJ_G0002787.1 mouse_genomes_project 10 82615886 82632237 - 4930483K19Rik antisense antisense MGP_CBAJ_T0027006.1 MGP_CBAJ_G0017540.1 mouse_genomes_project 10 140620675 140629750 + MGP_CBAJ_P0027006 B4galnt1 protein_coding protein_coding MGP_CBAJ_T0026866.1 MGP_CBAJ_G0017497.1 mouse_genomes_project 10 129869484 129902701 - MGP_CBAJ_P0026866 Rap1b protein_coding protein_coding MGP_CBAJ_T0098662.1 MGP_CBAJ_G0036917.1 mouse_genomes_project 10 142040386 142040492 - Gm23241 snRNA snRNA MGP_CBAJ_T0006004.1 MGP_CBAJ_G0005019.1 mouse_genomes_project 10 44750057 44752097 - Gm26860 lincRNA lincRNA MGP_CBAJ_T0025607.1 MGP_CBAJ_G0017136.1 mouse_genomes_project 10 83899875 83900208 + MGP_CBAJ_P0025607 Gm10272 protein_coding protein_coding MGP_CBAJ_T0026618.1 MGP_CBAJ_G0017399.1 mouse_genomes_project 10 103487724 103599059 + MGP_CBAJ_P0026618 Cep83 protein_coding protein_coding MGP_CBAJ_T0024773.1 MGP_CBAJ_G0016919.1 mouse_genomes_project 10 44404311 44459147 + MGP_CBAJ_P0024773 Snx3 protein_coding protein_coding MGP_CBAJ_T0024774.1 MGP_CBAJ_G0016919.1 mouse_genomes_project 10 44404312 44459730 + MGP_CBAJ_P0024774 Snx3 protein_coding protein_coding MGP_CBAJ_T0024775.1 MGP_CBAJ_G0016919.1 mouse_genomes_project 10 44404571 44459741 + MGP_CBAJ_P0024775 Snx3 protein_coding protein_coding MGP_CBAJ_T0025900.1 MGP_CBAJ_G0017225.1 mouse_genomes_project 10 86876114 86883787 + MGP_CBAJ_P0025900 Ndufs7 protein_coding protein_coding MGP_CBAJ_T0025901.1 MGP_CBAJ_G0017225.1 mouse_genomes_project 10 86876442 86880407 + Ndufs7 protein_coding retained_intron MGP_CBAJ_T0025902.1 MGP_CBAJ_G0017225.1 mouse_genomes_project 10 86876445 86883786 + MGP_CBAJ_P0025902 Ndufs7 protein_coding protein_coding MGP_CBAJ_T0025903.1 MGP_CBAJ_G0017225.1 mouse_genomes_project 10 86876453 86880935 + Ndufs7 protein_coding retained_intron MGP_CBAJ_T0025904.1 MGP_CBAJ_G0017225.1 mouse_genomes_project 10 86876478 86883788 + Ndufs7 protein_coding processed_transcript MGP_CBAJ_T0025905.1 MGP_CBAJ_G0017225.1 mouse_genomes_project 10 86880308 86882134 + Ndufs7 protein_coding retained_intron MGP_CBAJ_T0025252.1 MGP_CBAJ_G0017066.1 mouse_genomes_project 10 74291792 74295039 - MGP_CBAJ_P0025252 A930033H14Rik protein_coding protein_coding MGP_CBAJ_T0099857.1 MGP_CBAJ_G0038112.1 mouse_genomes_project 10 54917828 54917956 + Gm23906 snoRNA snoRNA MGP_CBAJ_T0025811.1 MGP_CBAJ_G0017208.1 mouse_genomes_project 10 86540975 86550006 + MGP_CBAJ_P0025811 Wdr18 protein_coding protein_coding MGP_CBAJ_T0024402.1 MGP_CBAJ_G0016787.1 mouse_genomes_project 10 19342478 19374565 + MGP_CBAJ_P0024402 Bclaf1 protein_coding protein_coding MGP_CBAJ_T0024403.1 MGP_CBAJ_G0016787.1 mouse_genomes_project 10 19342481 19372330 + MGP_CBAJ_P0024403 Bclaf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024404.1 MGP_CBAJ_G0016787.1 mouse_genomes_project 10 19342493 19374563 + MGP_CBAJ_P0024404 Bclaf1 protein_coding protein_coding MGP_CBAJ_T0024405.1 MGP_CBAJ_G0016787.1 mouse_genomes_project 10 19342537 19352605 + Bclaf1 protein_coding retained_intron MGP_CBAJ_T0024406.1 MGP_CBAJ_G0016787.1 mouse_genomes_project 10 19342538 19372326 + MGP_CBAJ_P0024406 Bclaf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024407.1 MGP_CBAJ_G0016787.1 mouse_genomes_project 10 19342546 19372327 + MGP_CBAJ_P0024407 Bclaf1 protein_coding protein_coding MGP_CBAJ_T0024408.1 MGP_CBAJ_G0016787.1 mouse_genomes_project 10 19353729 19376677 + MGP_CBAJ_P0024408 Bclaf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024409.1 MGP_CBAJ_G0016787.1 mouse_genomes_project 10 19356054 19364322 + MGP_CBAJ_P0024409 Bclaf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024410.1 MGP_CBAJ_G0016787.1 mouse_genomes_project 10 19359058 19365954 + Bclaf1 protein_coding retained_intron MGP_CBAJ_T0024411.1 MGP_CBAJ_G0016787.1 mouse_genomes_project 10 19365317 19372270 + Bclaf1 protein_coding retained_intron MGP_CBAJ_T0024851.1 MGP_CBAJ_G0016945.1 mouse_genomes_project 10 53840597 53944441 + MGP_CBAJ_P0024851 Sim1 protein_coding protein_coding MGP_CBAJ_T0026761.1 MGP_CBAJ_G0017458.1 mouse_genomes_project 10 123023290 123041272 + MGP_CBAJ_P0026761 Krr1 protein_coding protein_coding MGP_CBAJ_T0026762.1 MGP_CBAJ_G0017458.1 mouse_genomes_project 10 123023383 123029461 + Krr1 protein_coding retained_intron MGP_CBAJ_T0026763.1 MGP_CBAJ_G0017458.1 mouse_genomes_project 10 123023401 123039744 + Krr1 protein_coding retained_intron MGP_CBAJ_T0026764.1 MGP_CBAJ_G0017458.1 mouse_genomes_project 10 123023419 123037531 + MGP_CBAJ_P0026764 Krr1 protein_coding protein_coding MGP_CBAJ_T0027120.1 MGP_CBAJ_G0017577.1 mouse_genomes_project 10 141701645 141714680 + MGP_CBAJ_P0027120 Naca protein_coding protein_coding MGP_CBAJ_T0027121.1 MGP_CBAJ_G0017577.1 mouse_genomes_project 10 141701645 141714680 + MGP_CBAJ_P0027121 Naca protein_coding protein_coding MGP_CBAJ_T0026004.1 MGP_CBAJ_G0017250.1 mouse_genomes_project 10 87419358 87422048 + MGP_CBAJ_P0026004 Izumo4 protein_coding protein_coding MGP_CBAJ_T0099842.1 MGP_CBAJ_G0038097.1 mouse_genomes_project 10 23355742 23355816 - Gm23130 snoRNA snoRNA MGP_CBAJ_T0025684.1 MGP_CBAJ_G0017168.1 mouse_genomes_project 10 85296991 85332451 + MGP_CBAJ_P0025684 protein_coding protein_coding MGP_CBAJ_T0098650.1 MGP_CBAJ_G0036905.1 mouse_genomes_project 10 114208298 114208360 - Gm22339 snRNA snRNA MGP_CBAJ_T0006008.1 MGP_CBAJ_G0005023.1 mouse_genomes_project 10 64764828 64771607 + Gm20611 lincRNA lincRNA MGP_CBAJ_T0012244.1 MGP_CBAJ_G0010356.1 mouse_genomes_project 10 16541943 16542883 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0026367.1 MGP_CBAJ_G0017346.1 mouse_genomes_project 10 94404446 94416192 - Hsp90b1 protein_coding retained_intron MGP_CBAJ_T0026368.1 MGP_CBAJ_G0017346.1 mouse_genomes_project 10 94405086 94419738 - MGP_CBAJ_P0026368 Hsp90b1 protein_coding protein_coding MGP_CBAJ_T0026369.1 MGP_CBAJ_G0017346.1 mouse_genomes_project 10 94406648 94412662 - MGP_CBAJ_P0026369 Hsp90b1 protein_coding protein_coding MGP_CBAJ_T0026370.1 MGP_CBAJ_G0017346.1 mouse_genomes_project 10 94408268 94409969 - Hsp90b1 protein_coding retained_intron MGP_CBAJ_T0026371.1 MGP_CBAJ_G0017346.1 mouse_genomes_project 10 94416169 94417322 - Hsp90b1 protein_coding retained_intron MGP_CBAJ_T0026292.1 MGP_CBAJ_G0017322.1 mouse_genomes_project 10 90878110 90936226 + MGP_CBAJ_P0026292 A230046K03Rik protein_coding protein_coding MGP_CBAJ_T0026293.1 MGP_CBAJ_G0017322.1 mouse_genomes_project 10 90878211 90934024 + MGP_CBAJ_P0026293 A230046K03Rik protein_coding unknown_likely_coding MGP_CBAJ_T0026665.1 MGP_CBAJ_G0017426.1 mouse_genomes_project 10 109820816 109826421 - MGP_CBAJ_P0026665 protein_coding protein_coding MGP_CBAJ_T0026670.1 MGP_CBAJ_G0017428.1 mouse_genomes_project 10 110008358 110087794 + MGP_CBAJ_P0026670 Cep290 protein_coding unknown_likely_coding MGP_CBAJ_T0026671.1 MGP_CBAJ_G0017428.1 mouse_genomes_project 10 110009012 110089130 + MGP_CBAJ_P0026671 Cep290 protein_coding protein_coding MGP_CBAJ_T0027041.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 140882642 140964683 + MGP_CBAJ_P0027041 R3hdm2 protein_coding protein_coding MGP_CBAJ_T0027042.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 140903942 141029017 + MGP_CBAJ_P0027042 R3hdm2 protein_coding protein_coding MGP_CBAJ_T0027043.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 140903959 141029040 + MGP_CBAJ_P0027043 R3hdm2 protein_coding protein_coding MGP_CBAJ_T0027044.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 140903959 141029040 + MGP_CBAJ_P0027044 R3hdm2 protein_coding protein_coding MGP_CBAJ_T0027045.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 140938697 140971982 + MGP_CBAJ_P0027045 R3hdm2 protein_coding protein_coding MGP_CBAJ_T0027046.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 140939226 141029006 + MGP_CBAJ_P0027046 R3hdm2 protein_coding protein_coding MGP_CBAJ_T0027047.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 140939483 141028692 + MGP_CBAJ_P0027047 R3hdm2 protein_coding protein_coding MGP_CBAJ_T0027048.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 140939591 140972749 + MGP_CBAJ_P0027048 R3hdm2 protein_coding protein_coding MGP_CBAJ_T0027049.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 140964602 141028370 + MGP_CBAJ_P0027049 R3hdm2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027050.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 140964602 141028370 + MGP_CBAJ_P0027050 R3hdm2 protein_coding protein_coding MGP_CBAJ_T0027051.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 140964602 141029024 + MGP_CBAJ_P0027051 R3hdm2 protein_coding protein_coding MGP_CBAJ_T0027052.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 140964602 141029041 + MGP_CBAJ_P0027052 R3hdm2 protein_coding protein_coding MGP_CBAJ_T0027053.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 140979474 140985191 + MGP_CBAJ_P0027053 R3hdm2 protein_coding protein_coding MGP_CBAJ_T0027054.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 140979500 140985321 + R3hdm2 protein_coding retained_intron MGP_CBAJ_T0027055.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 140979504 141029040 + MGP_CBAJ_P0027055 R3hdm2 protein_coding protein_coding MGP_CBAJ_T0027056.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 140979544 141009950 + R3hdm2 protein_coding processed_transcript MGP_CBAJ_T0027057.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 141007110 141010341 + R3hdm2 protein_coding retained_intron MGP_CBAJ_T0027058.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 141011087 141021634 + R3hdm2 protein_coding retained_intron MGP_CBAJ_T0027059.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 141011278 141024023 + MGP_CBAJ_P0027059 R3hdm2 protein_coding protein_coding MGP_CBAJ_T0027060.1 MGP_CBAJ_G0017554.1 mouse_genomes_project 10 141021566 141029024 + MGP_CBAJ_P0027060 R3hdm2 protein_coding protein_coding MGP_CBAJ_T0003020.1 MGP_CBAJ_G0002816.1 mouse_genomes_project 10 128158696 128161882 + Kcnmb4os1 antisense antisense MGP_CBAJ_T0026449.1 MGP_CBAJ_G0017366.1 mouse_genomes_project 10 96732192 96819443 - MGP_CBAJ_P0026449 Utp20 protein_coding protein_coding MGP_CBAJ_T0009481.1 MGP_CBAJ_G0007619.1 mouse_genomes_project 10 86052804 86052866 - Mir6909 miRNA miRNA MGP_CBAJ_T0026638.1 MGP_CBAJ_G0017409.1 mouse_genomes_project 10 105169471 105169783 + MGP_CBAJ_P0026638 Gm5426 protein_coding protein_coding MGP_CBAJ_T0027020.1 MGP_CBAJ_G0017546.1 mouse_genomes_project 10 140740174 140759646 + MGP_CBAJ_P0027020 Dctn2 protein_coding protein_coding MGP_CBAJ_T0024635.1 MGP_CBAJ_G0016881.1 mouse_genomes_project 10 40389903 40435072 + Lama4 protein_coding retained_intron MGP_CBAJ_T0024636.1 MGP_CBAJ_G0016881.1 mouse_genomes_project 10 40389903 40559500 + MGP_CBAJ_P0024636 Lama4 protein_coding protein_coding MGP_CBAJ_T0024637.1 MGP_CBAJ_G0016881.1 mouse_genomes_project 10 40389941 40480811 + Lama4 protein_coding retained_intron MGP_CBAJ_T0024638.1 MGP_CBAJ_G0016881.1 mouse_genomes_project 10 40389958 40462148 + Lama4 protein_coding retained_intron MGP_CBAJ_T0024639.1 MGP_CBAJ_G0016881.1 mouse_genomes_project 10 40390060 40488083 + Lama4 protein_coding retained_intron MGP_CBAJ_T0024640.1 MGP_CBAJ_G0016881.1 mouse_genomes_project 10 40487368 40491231 + Lama4 protein_coding retained_intron MGP_CBAJ_T0024641.1 MGP_CBAJ_G0016881.1 mouse_genomes_project 10 40555102 40559409 + Lama4 protein_coding retained_intron MGP_CBAJ_T0027325.1 MGP_CBAJ_G0017678.1 mouse_genomes_project 10 144705923 144729338 - MGP_CBAJ_P0027325 protein_coding protein_coding MGP_CBAJ_T0025686.1 MGP_CBAJ_G0017170.1 mouse_genomes_project 10 85350784 85357925 + MGP_CBAJ_P0025686 Olfr1353 protein_coding protein_coding MGP_CBAJ_T0025687.1 MGP_CBAJ_G0017170.1 mouse_genomes_project 10 85350798 85357247 + MGP_CBAJ_P0025687 Olfr1353 protein_coding protein_coding MGP_CBAJ_T0025688.1 MGP_CBAJ_G0017170.1 mouse_genomes_project 10 85356910 85357925 + MGP_CBAJ_P0025688 Olfr1353 protein_coding protein_coding MGP_CBAJ_T0009514.1 MGP_CBAJ_G0007652.1 mouse_genomes_project 10 135582778 135582879 + Mir8104 miRNA miRNA MGP_CBAJ_T0016879.1 MGP_CBAJ_G0014881.1 mouse_genomes_project 10 133513665 133519362 + Gm15910 processed_transcript processed_transcript MGP_CBAJ_T0024854.1 MGP_CBAJ_G0016947.1 mouse_genomes_project 10 54454770 54477424 + Lilr4b protein_coding processed_transcript MGP_CBAJ_T0024855.1 MGP_CBAJ_G0016947.1 mouse_genomes_project 10 54467636 54477840 + MGP_CBAJ_P0024855 Lilr4b protein_coding protein_coding MGP_CBAJ_T0026916.1 MGP_CBAJ_G0017508.1 mouse_genomes_project 10 133403453 133418940 + MGP_CBAJ_P0026916 4921513I03Rik protein_coding protein_coding MGP_CBAJ_T0006062.1 MGP_CBAJ_G0005055.1 mouse_genomes_project 10 112880420 112881283 - Gm17028 lincRNA lincRNA MGP_CBAJ_T0024573.1 MGP_CBAJ_G0016849.1 mouse_genomes_project 10 30629534 30634939 - MGP_CBAJ_P0024573 Cenpw protein_coding protein_coding MGP_CBAJ_T0025994.1 MGP_CBAJ_G0017247.1 mouse_genomes_project 10 87345822 87363980 - MGP_CBAJ_P0025994 Btbd2 protein_coding protein_coding MGP_CBAJ_T0025995.1 MGP_CBAJ_G0017247.1 mouse_genomes_project 10 87345822 87363403 - MGP_CBAJ_P0025995 Btbd2 protein_coding protein_coding MGP_CBAJ_T0025996.1 MGP_CBAJ_G0017247.1 mouse_genomes_project 10 87345828 87347833 - Btbd2 protein_coding retained_intron MGP_CBAJ_T0025997.1 MGP_CBAJ_G0017247.1 mouse_genomes_project 10 87347334 87354676 - Btbd2 protein_coding retained_intron MGP_CBAJ_T0025998.1 MGP_CBAJ_G0017247.1 mouse_genomes_project 10 87347838 87363047 - MGP_CBAJ_P0025998 Btbd2 protein_coding protein_coding MGP_CBAJ_T0024202.1 MGP_CBAJ_G0016732.1 mouse_genomes_project 10 5265498 5278728 - MGP_CBAJ_P0024202 Ginm1 protein_coding protein_coding MGP_CBAJ_T0024203.1 MGP_CBAJ_G0016732.1 mouse_genomes_project 10 5265501 5268088 - Ginm1 protein_coding retained_intron MGP_CBAJ_T0024204.1 MGP_CBAJ_G0016732.1 mouse_genomes_project 10 5265507 5278702 - MGP_CBAJ_P0024204 Ginm1 protein_coding protein_coding MGP_CBAJ_T0024205.1 MGP_CBAJ_G0016732.1 mouse_genomes_project 10 5277131 5291012 - Ginm1 protein_coding processed_transcript MGP_CBAJ_T0024206.1 MGP_CBAJ_G0016732.1 mouse_genomes_project 10 5289523 5291036 - Ginm1 protein_coding processed_transcript MGP_CBAJ_T0024207.1 MGP_CBAJ_G0016732.1 mouse_genomes_project 10 5290734 5291034 - MGP_CBAJ_P0024207 Ginm1 protein_coding protein_coding MGP_CBAJ_T0099830.1 MGP_CBAJ_G0038085.1 mouse_genomes_project 10 6449995 6450132 - Gm25410 snoRNA snoRNA MGP_CBAJ_T0012266.1 MGP_CBAJ_G0010378.1 mouse_genomes_project 10 55213230 55213790 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0024881.1 MGP_CBAJ_G0016960.1 mouse_genomes_project 10 56405640 56520417 - MGP_CBAJ_P0024881 Cep85l protein_coding protein_coding MGP_CBAJ_T0009480.1 MGP_CBAJ_G0007618.1 mouse_genomes_project 10 84887485 84888424 + miRNA miRNA MGP_CBAJ_T0024981.1 MGP_CBAJ_G0016994.1 mouse_genomes_project 10 63361732 63384001 + MGP_CBAJ_P0024981 Dnajb12 protein_coding protein_coding MGP_CBAJ_T0024982.1 MGP_CBAJ_G0016994.1 mouse_genomes_project 10 63361740 63380189 + MGP_CBAJ_P0024982 Dnajb12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024983.1 MGP_CBAJ_G0016994.1 mouse_genomes_project 10 63361751 63383995 + MGP_CBAJ_P0024983 Dnajb12 protein_coding protein_coding MGP_CBAJ_T0024984.1 MGP_CBAJ_G0016994.1 mouse_genomes_project 10 63361794 63378950 + MGP_CBAJ_P0024984 Dnajb12 protein_coding protein_coding MGP_CBAJ_T0024985.1 MGP_CBAJ_G0016994.1 mouse_genomes_project 10 63361802 63380696 + MGP_CBAJ_P0024985 Dnajb12 protein_coding protein_coding MGP_CBAJ_T0025614.1 MGP_CBAJ_G0017143.1 mouse_genomes_project 10 84055764 84128164 + MGP_CBAJ_P0025614 Tspear protein_coding protein_coding MGP_CBAJ_T0025615.1 MGP_CBAJ_G0017143.1 mouse_genomes_project 10 84055829 84135074 + MGP_CBAJ_P0025615 Tspear protein_coding protein_coding MGP_CBAJ_T0025617.1 MGP_CBAJ_G0017143.1 mouse_genomes_project 10 84108618 84112038 + Tspear protein_coding retained_intron MGP_CBAJ_T0026107.1 MGP_CBAJ_G0017281.1 mouse_genomes_project 10 88094911 88097133 - MGP_CBAJ_P0026107 Mrpl54 protein_coding protein_coding MGP_CBAJ_T0026108.1 MGP_CBAJ_G0017281.1 mouse_genomes_project 10 88095628 88097123 - Mrpl54 protein_coding retained_intron MGP_CBAJ_T0027206.1 MGP_CBAJ_G0017604.1 mouse_genomes_project 10 142353073 142361232 - MGP_CBAJ_P0027206 Pa2g4 protein_coding protein_coding MGP_CBAJ_T0027207.1 MGP_CBAJ_G0017604.1 mouse_genomes_project 10 142354745 142361125 - MGP_CBAJ_P0027207 Pa2g4 protein_coding protein_coding MGP_CBAJ_T0027208.1 MGP_CBAJ_G0017604.1 mouse_genomes_project 10 142358449 142361167 - Pa2g4 protein_coding retained_intron MGP_CBAJ_T0024175.1 MGP_CBAJ_G0016725.1 mouse_genomes_project 10 4579593 4595963 - MGP_CBAJ_P0024175 Cnksr3 protein_coding protein_coding MGP_CBAJ_T0024176.1 MGP_CBAJ_G0016725.1 mouse_genomes_project 10 4579593 4680349 - MGP_CBAJ_P0024176 Cnksr3 protein_coding protein_coding MGP_CBAJ_T0003004.1 MGP_CBAJ_G0002805.1 mouse_genomes_project 10 94564030 94599581 + Gm16268 antisense antisense MGP_CBAJ_T0101521.1 MGP_CBAJ_G0039553.1 mouse_genomes_project 10 142957585 142958515 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0025677.1 MGP_CBAJ_G0017163.1 mouse_genomes_project 10 85097515 85103725 - MGP_CBAJ_P0025677 Casp14 protein_coding protein_coding MGP_CBAJ_T0101529.1 MGP_CBAJ_G0039561.1 mouse_genomes_project 10 144176403 144177155 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0024603.1 MGP_CBAJ_G0016863.1 mouse_genomes_project 10 34763540 34772952 + MGP_CBAJ_P0024603 Rsph4a protein_coding protein_coding MGP_CBAJ_T0003036.1 MGP_CBAJ_G0002827.1 mouse_genomes_project 10 141222987 141231010 - Gm16230 antisense antisense MGP_CBAJ_T0026828.1 MGP_CBAJ_G0017480.1 mouse_genomes_project 10 128585300 128735536 - MGP_CBAJ_P0026828 Myrfl protein_coding protein_coding MGP_CBAJ_T0026799.1 MGP_CBAJ_G0017474.1 mouse_genomes_project 10 127463281 127503876 + MGP_CBAJ_P0026799 Tspan8 protein_coding protein_coding MGP_CBAJ_T0026800.1 MGP_CBAJ_G0017474.1 mouse_genomes_project 10 127463281 127503876 + MGP_CBAJ_P0026800 Tspan8 protein_coding protein_coding MGP_CBAJ_T0026801.1 MGP_CBAJ_G0017474.1 mouse_genomes_project 10 127463281 127503876 + MGP_CBAJ_P0026801 Tspan8 protein_coding protein_coding MGP_CBAJ_T0026835.1 MGP_CBAJ_G0017486.1 mouse_genomes_project 10 128941934 129038155 - MGP_CBAJ_P0026835 Frs2 protein_coding protein_coding MGP_CBAJ_T0009477.1 MGP_CBAJ_G0007615.1 mouse_genomes_project 10 84749364 84749435 - Mir6907 miRNA miRNA MGP_CBAJ_T0012246.1 MGP_CBAJ_G0010358.1 mouse_genomes_project 10 19706662 19710604 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097750.1 MGP_CBAJ_G0036023.1 mouse_genomes_project 10 78684839 78685311 + pseudogene pseudogene MGP_CBAJ_T0024208.1 MGP_CBAJ_G0016733.1 mouse_genomes_project 10 5291102 5323424 + MGP_CBAJ_P0024208 Ppil4 protein_coding protein_coding MGP_CBAJ_T0024209.1 MGP_CBAJ_G0016733.1 mouse_genomes_project 10 5291119 5307429 + Ppil4 protein_coding retained_intron MGP_CBAJ_T0024210.1 MGP_CBAJ_G0016733.1 mouse_genomes_project 10 5291132 5313002 + MGP_CBAJ_P0024210 Ppil4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024211.1 MGP_CBAJ_G0016733.1 mouse_genomes_project 10 5299418 5305433 + Ppil4 protein_coding retained_intron MGP_CBAJ_T0099829.1 MGP_CBAJ_G0038084.1 mouse_genomes_project 10 5359587 5359708 - Gm24726 snoRNA snoRNA MGP_CBAJ_T0024422.1 MGP_CBAJ_G0016791.1 mouse_genomes_project 10 20268369 20315244 - MGP_CBAJ_P0024422 Myb protein_coding protein_coding MGP_CBAJ_T0024423.1 MGP_CBAJ_G0016791.1 mouse_genomes_project 10 20268709 20315244 - MGP_CBAJ_P0024423 Myb protein_coding protein_coding MGP_CBAJ_T0024424.1 MGP_CBAJ_G0016791.1 mouse_genomes_project 10 20288305 20315189 - Myb protein_coding retained_intron MGP_CBAJ_T0025551.1 MGP_CBAJ_G0017125.1 mouse_genomes_project 10 83146941 83157056 + MGP_CBAJ_P0025551 Slc19a1 protein_coding protein_coding MGP_CBAJ_T0025552.1 MGP_CBAJ_G0017125.1 mouse_genomes_project 10 83146971 83156542 + MGP_CBAJ_P0025552 Slc19a1 protein_coding protein_coding MGP_CBAJ_T0025553.1 MGP_CBAJ_G0017125.1 mouse_genomes_project 10 83147384 83165127 + MGP_CBAJ_P0025553 Slc19a1 protein_coding protein_coding MGP_CBAJ_T0025554.1 MGP_CBAJ_G0017125.1 mouse_genomes_project 10 83147912 83165126 + MGP_CBAJ_P0025554 Slc19a1 protein_coding protein_coding MGP_CBAJ_T0025555.1 MGP_CBAJ_G0017125.1 mouse_genomes_project 10 83147968 83160963 + MGP_CBAJ_P0025555 Slc19a1 protein_coding protein_coding MGP_CBAJ_T0025556.1 MGP_CBAJ_G0017125.1 mouse_genomes_project 10 83147981 83157651 + MGP_CBAJ_P0025556 Slc19a1 protein_coding protein_coding MGP_CBAJ_T0025557.1 MGP_CBAJ_G0017125.1 mouse_genomes_project 10 83148019 83157025 + MGP_CBAJ_P0025557 Slc19a1 protein_coding protein_coding MGP_CBAJ_T0025558.1 MGP_CBAJ_G0017125.1 mouse_genomes_project 10 83157194 83159593 + Slc19a1 protein_coding retained_intron MGP_CBAJ_T0025559.1 MGP_CBAJ_G0017125.1 mouse_genomes_project 10 83157485 83175697 + MGP_CBAJ_P0025559 Slc19a1 protein_coding protein_coding MGP_CBAJ_T0098612.1 MGP_CBAJ_G0036867.1 mouse_genomes_project 10 30960161 30960263 + Gm22623 snRNA snRNA MGP_CBAJ_T0026406.1 MGP_CBAJ_G0017358.1 mouse_genomes_project 10 96091374 96141881 + MGP_CBAJ_P0026406 Ccdc53 protein_coding protein_coding MGP_CBAJ_T0026407.1 MGP_CBAJ_G0017358.1 mouse_genomes_project 10 96091427 96109709 + MGP_CBAJ_P0026407 Ccdc53 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026408.1 MGP_CBAJ_G0017358.1 mouse_genomes_project 10 96091433 96141729 + MGP_CBAJ_P0026408 Ccdc53 protein_coding protein_coding MGP_CBAJ_T0026409.1 MGP_CBAJ_G0017358.1 mouse_genomes_project 10 96091452 96119029 + MGP_CBAJ_P0026409 Ccdc53 protein_coding protein_coding MGP_CBAJ_T0026410.1 MGP_CBAJ_G0017358.1 mouse_genomes_project 10 96091465 96109411 + Ccdc53 protein_coding retained_intron MGP_CBAJ_T0026411.1 MGP_CBAJ_G0017358.1 mouse_genomes_project 10 96091544 96118808 + MGP_CBAJ_P0026411 Ccdc53 protein_coding protein_coding MGP_CBAJ_T0026412.1 MGP_CBAJ_G0017358.1 mouse_genomes_project 10 96094826 96130833 + Ccdc53 protein_coding processed_transcript MGP_CBAJ_T0026413.1 MGP_CBAJ_G0017358.1 mouse_genomes_project 10 96131475 96141730 + Ccdc53 protein_coding processed_transcript MGP_CBAJ_T0024457.1 MGP_CBAJ_G0016801.1 mouse_genomes_project 10 22120305 22187110 + MGP_CBAJ_P0024457 Slc2a12 protein_coding protein_coding MGP_CBAJ_T0024458.1 MGP_CBAJ_G0016801.1 mouse_genomes_project 10 22124302 22142189 + Slc2a12 protein_coding processed_transcript MGP_CBAJ_T0024833.1 MGP_CBAJ_G0016941.1 mouse_genomes_project 10 47661881 47769053 - MGP_CBAJ_P0024833 Lin28b protein_coding protein_coding MGP_CBAJ_T0024834.1 MGP_CBAJ_G0016941.1 mouse_genomes_project 10 47666326 47769145 - MGP_CBAJ_P0024834 Lin28b protein_coding unknown_likely_coding MGP_CBAJ_T0025926.1 MGP_CBAJ_G0017231.1 mouse_genomes_project 10 86954235 86966484 - Pcsk4 protein_coding retained_intron MGP_CBAJ_T0025927.1 MGP_CBAJ_G0017231.1 mouse_genomes_project 10 86954235 86966486 - MGP_CBAJ_P0025927 Pcsk4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025928.1 MGP_CBAJ_G0017231.1 mouse_genomes_project 10 86954235 86966529 - MGP_CBAJ_P0025928 Pcsk4 protein_coding protein_coding MGP_CBAJ_T0025929.1 MGP_CBAJ_G0017231.1 mouse_genomes_project 10 86954239 86956080 - Pcsk4 protein_coding retained_intron MGP_CBAJ_T0025930.1 MGP_CBAJ_G0017231.1 mouse_genomes_project 10 86954239 86956079 - Pcsk4 protein_coding retained_intron MGP_CBAJ_T0025931.1 MGP_CBAJ_G0017231.1 mouse_genomes_project 10 86955074 86966430 - MGP_CBAJ_P0025931 Pcsk4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0003019.1 MGP_CBAJ_G0002815.1 mouse_genomes_project 10 126294286 126308901 + Gm15723 antisense antisense MGP_CBAJ_T0099869.1 MGP_CBAJ_G0038124.1 mouse_genomes_project 10 87980743 87980807 + Snord37 snoRNA snoRNA MGP_CBAJ_T0026451.1 MGP_CBAJ_G0017368.1 mouse_genomes_project 10 96957543 97310533 - MGP_CBAJ_P0026451 Ano4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026452.1 MGP_CBAJ_G0017368.1 mouse_genomes_project 10 96957544 97310333 - MGP_CBAJ_P0026452 Ano4 protein_coding protein_coding MGP_CBAJ_T0026453.1 MGP_CBAJ_G0017368.1 mouse_genomes_project 10 96957550 97310365 - MGP_CBAJ_P0026453 Ano4 protein_coding protein_coding MGP_CBAJ_T0026454.1 MGP_CBAJ_G0017368.1 mouse_genomes_project 10 96957551 97310043 - MGP_CBAJ_P0026454 Ano4 protein_coding protein_coding MGP_CBAJ_T0026455.1 MGP_CBAJ_G0017368.1 mouse_genomes_project 10 96990798 97009828 - MGP_CBAJ_P0026455 Ano4 protein_coding protein_coding MGP_CBAJ_T0026456.1 MGP_CBAJ_G0017368.1 mouse_genomes_project 10 97004547 97040152 - Ano4 protein_coding processed_transcript MGP_CBAJ_T0026457.1 MGP_CBAJ_G0017368.1 mouse_genomes_project 10 97030713 97310297 - Ano4 protein_coding retained_intron MGP_CBAJ_T0026458.1 MGP_CBAJ_G0017368.1 mouse_genomes_project 10 97050156 97398677 - MGP_CBAJ_P0026458 Ano4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026459.1 MGP_CBAJ_G0017368.1 mouse_genomes_project 10 97092335 97310333 - MGP_CBAJ_P0026459 Ano4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026460.1 MGP_CBAJ_G0017368.1 mouse_genomes_project 10 97092887 97309879 - MGP_CBAJ_P0026460 Ano4 protein_coding protein_coding MGP_CBAJ_T0026461.1 MGP_CBAJ_G0017368.1 mouse_genomes_project 10 97113864 97369705 - MGP_CBAJ_P0026461 Ano4 protein_coding protein_coding MGP_CBAJ_T0026462.1 MGP_CBAJ_G0017368.1 mouse_genomes_project 10 97389592 97398794 - Ano4 protein_coding processed_transcript MGP_CBAJ_T0012243.1 MGP_CBAJ_G0010355.1 mouse_genomes_project 10 12077065 12078073 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0025082.1 MGP_CBAJ_G0017022.1 mouse_genomes_project 10 65783291 65823427 - Col13a1 protein_coding processed_transcript MGP_CBAJ_T0025083.1 MGP_CBAJ_G0017022.1 mouse_genomes_project 10 65783291 65811450 - MGP_CBAJ_P0025083 Col13a1 protein_coding protein_coding MGP_CBAJ_T0025084.1 MGP_CBAJ_G0017022.1 mouse_genomes_project 10 65783291 65936831 - MGP_CBAJ_P0025084 Col13a1 protein_coding protein_coding MGP_CBAJ_T0025085.1 MGP_CBAJ_G0017022.1 mouse_genomes_project 10 65783291 65936831 - MGP_CBAJ_P0025085 Col13a1 protein_coding protein_coding MGP_CBAJ_T0025086.1 MGP_CBAJ_G0017022.1 mouse_genomes_project 10 65783291 65936866 - MGP_CBAJ_P0025086 Col13a1 protein_coding protein_coding MGP_CBAJ_T0025087.1 MGP_CBAJ_G0017022.1 mouse_genomes_project 10 65783761 65936394 - MGP_CBAJ_P0025087 Col13a1 protein_coding unknown_likely_coding MGP_CBAJ_T0025088.1 MGP_CBAJ_G0017022.1 mouse_genomes_project 10 65783761 65936151 - MGP_CBAJ_P0025088 Col13a1 protein_coding unknown_likely_coding MGP_CBAJ_T0025089.1 MGP_CBAJ_G0017022.1 mouse_genomes_project 10 65793780 65935879 - Col13a1 protein_coding retained_intron MGP_CBAJ_T0025090.1 MGP_CBAJ_G0017022.1 mouse_genomes_project 10 65793909 65796574 - Col13a1 protein_coding retained_intron MGP_CBAJ_T0024779.1 MGP_CBAJ_G0016921.1 mouse_genomes_project 10 44525695 44526605 + Ostm1 protein_coding processed_transcript MGP_CBAJ_T0024780.1 MGP_CBAJ_G0016921.1 mouse_genomes_project 10 44525708 44686614 + MGP_CBAJ_P0024780 Ostm1 protein_coding protein_coding MGP_CBAJ_T0024781.1 MGP_CBAJ_G0016921.1 mouse_genomes_project 10 44525711 44688783 + MGP_CBAJ_P0024781 Ostm1 protein_coding protein_coding MGP_CBAJ_T0024782.1 MGP_CBAJ_G0016921.1 mouse_genomes_project 10 44664125 44690750 + MGP_CBAJ_P0024782 Ostm1 protein_coding protein_coding MGP_CBAJ_T0024783.1 MGP_CBAJ_G0016921.1 mouse_genomes_project 10 44664175 44688282 + Ostm1 protein_coding retained_intron MGP_CBAJ_T0026404.1 MGP_CBAJ_G0017357.1 mouse_genomes_project 10 96034868 96067737 + MGP_CBAJ_P0026404 Nup37 protein_coding protein_coding MGP_CBAJ_T0026405.1 MGP_CBAJ_G0017357.1 mouse_genomes_project 10 96034947 96067737 + MGP_CBAJ_P0026405 Nup37 protein_coding protein_coding MGP_CBAJ_T0026019.1 MGP_CBAJ_G0017256.1 mouse_genomes_project 10 87536616 87540004 - MGP_CBAJ_P0026019 Jsrp1 protein_coding protein_coding MGP_CBAJ_T0026020.1 MGP_CBAJ_G0017256.1 mouse_genomes_project 10 87536618 87541611 - MGP_CBAJ_P0026020 Jsrp1 protein_coding protein_coding MGP_CBAJ_T0026021.1 MGP_CBAJ_G0017256.1 mouse_genomes_project 10 87536621 87541614 - MGP_CBAJ_P0026021 Jsrp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026022.1 MGP_CBAJ_G0017256.1 mouse_genomes_project 10 87538301 87541617 - MGP_CBAJ_P0026022 Jsrp1 protein_coding protein_coding MGP_CBAJ_T0024290.1 MGP_CBAJ_G0016753.1 mouse_genomes_project 10 11262983 11281001 - MGP_CBAJ_P0024290 Ltv1 protein_coding protein_coding MGP_CBAJ_T0024413.1 MGP_CBAJ_G0016789.1 mouse_genomes_project 10 19435299 19815698 - MGP_CBAJ_P0024413 Pde7b protein_coding protein_coding MGP_CBAJ_T0024414.1 MGP_CBAJ_G0016789.1 mouse_genomes_project 10 19436223 19611974 - MGP_CBAJ_P0024414 Pde7b protein_coding nonsense_mediated_decay MGP_CBAJ_T0024415.1 MGP_CBAJ_G0016789.1 mouse_genomes_project 10 19437713 19815316 - MGP_CBAJ_P0024415 Pde7b protein_coding protein_coding MGP_CBAJ_T0024416.1 MGP_CBAJ_G0016789.1 mouse_genomes_project 10 19437713 19611974 - MGP_CBAJ_P0024416 Pde7b protein_coding protein_coding MGP_CBAJ_T0024417.1 MGP_CBAJ_G0016789.1 mouse_genomes_project 10 19446213 19612116 - MGP_CBAJ_P0024417 Pde7b protein_coding protein_coding MGP_CBAJ_T0024418.1 MGP_CBAJ_G0016789.1 mouse_genomes_project 10 19529199 19815652 - Pde7b protein_coding retained_intron MGP_CBAJ_T0024419.1 MGP_CBAJ_G0016789.1 mouse_genomes_project 10 19690952 19815652 - Pde7b protein_coding retained_intron MGP_CBAJ_T0009506.1 MGP_CBAJ_G0007644.1 mouse_genomes_project 10 114258033 114258141 + Mir6411 miRNA miRNA MGP_CBAJ_T0024366.1 MGP_CBAJ_G0016772.1 mouse_genomes_project 10 17359430 17369265 - MGP_CBAJ_P0024366 Hebp2 protein_coding protein_coding MGP_CBAJ_T0025481.1 MGP_CBAJ_G0017102.1 mouse_genomes_project 10 81860037 81862581 + MGP_CBAJ_P0025481 Derl3 protein_coding protein_coding MGP_CBAJ_T0024704.1 MGP_CBAJ_G0016904.1 mouse_genomes_project 10 42914499 43034746 - MGP_CBAJ_P0024704 Fig4 protein_coding protein_coding MGP_CBAJ_T0026696.1 MGP_CBAJ_G0017434.1 mouse_genomes_project 10 112850763 112878086 - MGP_CBAJ_P0026696 Alx1 protein_coding protein_coding MGP_CBAJ_T0026697.1 MGP_CBAJ_G0017434.1 mouse_genomes_project 10 112850764 112877891 - MGP_CBAJ_P0026697 Alx1 protein_coding protein_coding MGP_CBAJ_T0026698.1 MGP_CBAJ_G0017434.1 mouse_genomes_project 10 112851068 112867312 - Alx1 protein_coding processed_transcript MGP_CBAJ_T0024863.1 MGP_CBAJ_G0016952.1 mouse_genomes_project 10 55043463 55049433 + MGP_CBAJ_P0024863 Vgll2 protein_coding protein_coding MGP_CBAJ_T0024864.1 MGP_CBAJ_G0016952.1 mouse_genomes_project 10 55043489 55049305 + MGP_CBAJ_P0024864 Vgll2 protein_coding protein_coding MGP_CBAJ_T0024479.1 MGP_CBAJ_G0016813.1 mouse_genomes_project 10 23559160 23560174 + MGP_CBAJ_P0024479 Taar5 protein_coding protein_coding MGP_CBAJ_T0016876.1 MGP_CBAJ_G0014880.1 mouse_genomes_project 10 132919105 132937322 + 1700006J14Rik processed_transcript processed_transcript MGP_CBAJ_T0016877.1 MGP_CBAJ_G0014880.1 mouse_genomes_project 10 132919105 132938822 + 1700006J14Rik processed_transcript processed_transcript MGP_CBAJ_T0016878.1 MGP_CBAJ_G0014880.1 mouse_genomes_project 10 132919105 132938315 + 1700006J14Rik processed_transcript processed_transcript MGP_CBAJ_T0024824.1 MGP_CBAJ_G0016937.1 mouse_genomes_project 10 46616405 46640147 - MGP_CBAJ_P0024824 Prdm1 protein_coding protein_coding MGP_CBAJ_T0024825.1 MGP_CBAJ_G0016937.1 mouse_genomes_project 10 46617428 46638609 - MGP_CBAJ_P0024825 Prdm1 protein_coding unknown_likely_coding MGP_CBAJ_T0024826.1 MGP_CBAJ_G0016937.1 mouse_genomes_project 10 46617521 46640086 - MGP_CBAJ_P0024826 Prdm1 protein_coding protein_coding MGP_CBAJ_T0024827.1 MGP_CBAJ_G0016937.1 mouse_genomes_project 10 46628063 46713867 - Prdm1 protein_coding processed_transcript MGP_CBAJ_T0003009.1 MGP_CBAJ_G0002809.1 mouse_genomes_project 10 96371495 96377147 - Gm16235 antisense antisense MGP_CBAJ_T0003010.1 MGP_CBAJ_G0002809.1 mouse_genomes_project 10 96372413 96373194 - Gm16235 antisense antisense MGP_CBAJ_T0002993.1 MGP_CBAJ_G0002796.1 mouse_genomes_project 10 88134589 88135806 - Gm16315 antisense antisense MGP_CBAJ_T0024634.1 MGP_CBAJ_G0016880.1 mouse_genomes_project 10 40237504 40238743 - MGP_CBAJ_P0024634 Rfpl4b protein_coding protein_coding MGP_CBAJ_T0027279.1 MGP_CBAJ_G0017643.1 mouse_genomes_project 10 143457944 143459014 + MGP_CBAJ_P0027279 protein_coding protein_coding MGP_CBAJ_T0006002.1 MGP_CBAJ_G0005017.1 mouse_genomes_project 10 41429074 41444887 + lincRNA lincRNA MGP_CBAJ_T0006065.1 MGP_CBAJ_G0005058.1 mouse_genomes_project 10 122592010 122600601 - 4933440J02Rik lincRNA lincRNA MGP_CBAJ_T0002960.1 MGP_CBAJ_G0002769.1 mouse_genomes_project 10 45169482 45170898 + Gm29245 antisense antisense MGP_CBAJ_T0099887.1 MGP_CBAJ_G0038142.1 mouse_genomes_project 10 140217999 140218137 - Gm24179 snoRNA snoRNA MGP_CBAJ_T0026569.1 MGP_CBAJ_G0017391.1 mouse_genomes_project 10 102494685 102512215 + MGP_CBAJ_P0026569 Usp44 protein_coding protein_coding MGP_CBAJ_T0027280.1 MGP_CBAJ_G0017644.1 mouse_genomes_project 10 143458017 143458986 + MGP_CBAJ_P0027280 protein_coding protein_coding MGP_CBAJ_T0024531.1 MGP_CBAJ_G0016837.1 mouse_genomes_project 10 26265140 26369135 - MGP_CBAJ_P0024531 L3mbtl3 protein_coding protein_coding MGP_CBAJ_T0024532.1 MGP_CBAJ_G0016837.1 mouse_genomes_project 10 26265143 26369135 - MGP_CBAJ_P0024532 L3mbtl3 protein_coding protein_coding MGP_CBAJ_T0024533.1 MGP_CBAJ_G0016837.1 mouse_genomes_project 10 26266124 26370364 - MGP_CBAJ_P0024533 L3mbtl3 protein_coding protein_coding MGP_CBAJ_T0027066.1 MGP_CBAJ_G0017556.1 mouse_genomes_project 10 141044845 141047088 + MGP_CBAJ_P0027066 Ndufa4l2 protein_coding protein_coding MGP_CBAJ_T0024105.1 MGP_CBAJ_G0016713.1 mouse_genomes_project 10 1574846 1665129 + MGP_CBAJ_P0024105 Ccdc170 protein_coding protein_coding MGP_CBAJ_T0024106.1 MGP_CBAJ_G0016713.1 mouse_genomes_project 10 1608677 1665129 + MGP_CBAJ_P0024106 Ccdc170 protein_coding protein_coding MGP_CBAJ_T0024107.1 MGP_CBAJ_G0016713.1 mouse_genomes_project 10 1610344 1613098 + MGP_CBAJ_P0024107 Ccdc170 protein_coding protein_coding MGP_CBAJ_T0024108.1 MGP_CBAJ_G0016713.1 mouse_genomes_project 10 1637493 1646191 + Ccdc170 protein_coding processed_transcript MGP_CBAJ_T0026961.1 MGP_CBAJ_G0017524.1 mouse_genomes_project 10 136076267 136163055 - MGP_CBAJ_P0026961 Usp15 protein_coding protein_coding MGP_CBAJ_T0025793.1 MGP_CBAJ_G0017201.1 mouse_genomes_project 10 86450133 86452028 + MGP_CBAJ_P0025793 Elane protein_coding protein_coding MGP_CBAJ_T0026376.1 MGP_CBAJ_G0017350.1 mouse_genomes_project 10 94566137 94759239 - MGP_CBAJ_P0026376 Stab2 protein_coding protein_coding MGP_CBAJ_T0026377.1 MGP_CBAJ_G0017350.1 mouse_genomes_project 10 94566260 94630117 - MGP_CBAJ_P0026377 Stab2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026378.1 MGP_CBAJ_G0017350.1 mouse_genomes_project 10 94596485 94609000 - Stab2 protein_coding retained_intron MGP_CBAJ_T0026379.1 MGP_CBAJ_G0017350.1 mouse_genomes_project 10 94598454 94624262 - Stab2 protein_coding retained_intron MGP_CBAJ_T0026380.1 MGP_CBAJ_G0017350.1 mouse_genomes_project 10 94662059 94683989 - Stab2 protein_coding processed_transcript MGP_CBAJ_T0026381.1 MGP_CBAJ_G0017350.1 mouse_genomes_project 10 94736608 94759226 - Stab2 protein_coding processed_transcript MGP_CBAJ_T0026382.1 MGP_CBAJ_G0017350.1 mouse_genomes_project 10 94738294 94759236 - Stab2 protein_coding processed_transcript MGP_CBAJ_T0025919.1 MGP_CBAJ_G0017229.1 mouse_genomes_project 10 86927343 86951266 + MGP_CBAJ_P0025919 Apc2 protein_coding protein_coding MGP_CBAJ_T0025920.1 MGP_CBAJ_G0017229.1 mouse_genomes_project 10 86930427 86933702 + MGP_CBAJ_P0025920 Apc2 protein_coding protein_coding MGP_CBAJ_T0025921.1 MGP_CBAJ_G0017229.1 mouse_genomes_project 10 86932183 86934696 + Apc2 protein_coding retained_intron MGP_CBAJ_T0025922.1 MGP_CBAJ_G0017229.1 mouse_genomes_project 10 86932370 86933688 + MGP_CBAJ_P0025922 Apc2 protein_coding protein_coding MGP_CBAJ_T0025923.1 MGP_CBAJ_G0017229.1 mouse_genomes_project 10 86932371 86933747 + MGP_CBAJ_P0025923 Apc2 protein_coding protein_coding MGP_CBAJ_T0025924.1 MGP_CBAJ_G0017229.1 mouse_genomes_project 10 86933160 86951259 + MGP_CBAJ_P0025924 Apc2 protein_coding protein_coding MGP_CBAJ_T0025988.1 MGP_CBAJ_G0017244.1 mouse_genomes_project 10 87299750 87307524 + MGP_CBAJ_P0025988 Adat3 protein_coding protein_coding MGP_CBAJ_T0025991.1 MGP_CBAJ_G0017244.1 mouse_genomes_project 10 87305904 87315656 + MGP_CBAJ_P0025991 Adat3 protein_coding protein_coding MGP_CBAJ_T0006060.1 MGP_CBAJ_G0005054.1 mouse_genomes_project 10 108713740 108846819 + B530045E10Rik lincRNA lincRNA MGP_CBAJ_T0006061.1 MGP_CBAJ_G0005054.1 mouse_genomes_project 10 108844295 108846819 + B530045E10Rik lincRNA lincRNA MGP_CBAJ_T0026841.1 MGP_CBAJ_G0017491.1 mouse_genomes_project 10 129225644 129230092 - MGP_CBAJ_P0026841 Lyz1 protein_coding protein_coding MGP_CBAJ_T0026469.1 MGP_CBAJ_G0017372.1 mouse_genomes_project 10 97743397 97794604 - MGP_CBAJ_P0026469 Scyl2 protein_coding protein_coding MGP_CBAJ_T0026470.1 MGP_CBAJ_G0017372.1 mouse_genomes_project 10 97744345 97761168 - Scyl2 protein_coding processed_transcript MGP_CBAJ_T0026471.1 MGP_CBAJ_G0017372.1 mouse_genomes_project 10 97744628 97794587 - MGP_CBAJ_P0026471 Scyl2 protein_coding protein_coding MGP_CBAJ_T0026472.1 MGP_CBAJ_G0017372.1 mouse_genomes_project 10 97756448 97760872 - Scyl2 protein_coding retained_intron MGP_CBAJ_T0026473.1 MGP_CBAJ_G0017372.1 mouse_genomes_project 10 97757446 97766846 - MGP_CBAJ_P0026473 Scyl2 protein_coding protein_coding MGP_CBAJ_T0026474.1 MGP_CBAJ_G0017372.1 mouse_genomes_project 10 97775780 97794587 - Scyl2 protein_coding retained_intron MGP_CBAJ_T0026475.1 MGP_CBAJ_G0017372.1 mouse_genomes_project 10 97783990 97794582 - Scyl2 protein_coding retained_intron MGP_CBAJ_T0009472.1 MGP_CBAJ_G0007610.1 mouse_genomes_project 10 66768118 66768169 + Mir7215 miRNA miRNA MGP_CBAJ_T0098600.1 MGP_CBAJ_G0036855.1 mouse_genomes_project 10 1089361 1089518 + Gm25515 snRNA snRNA MGP_CBAJ_T0027253.1 MGP_CBAJ_G0017624.1 mouse_genomes_project 10 142831265 142833965 - MGP_CBAJ_P0027253 Mettl7b protein_coding protein_coding MGP_CBAJ_T0026850.1 MGP_CBAJ_G0017493.1 mouse_genomes_project 10 129661072 129666947 + Cpm protein_coding processed_transcript MGP_CBAJ_T0026851.1 MGP_CBAJ_G0017493.1 mouse_genomes_project 10 129661072 129703009 + Cpm protein_coding retained_intron MGP_CBAJ_T0026852.1 MGP_CBAJ_G0017493.1 mouse_genomes_project 10 129661072 129721712 + MGP_CBAJ_P0026852 Cpm protein_coding protein_coding MGP_CBAJ_T0026853.1 MGP_CBAJ_G0017493.1 mouse_genomes_project 10 129710289 129719294 + Cpm protein_coding retained_intron MGP_CBAJ_T0101528.1 MGP_CBAJ_G0039560.1 mouse_genomes_project 10 144044813 144045002 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0026871.1 MGP_CBAJ_G0017499.1 mouse_genomes_project 10 130638831 130643681 + MGP_CBAJ_P0026871 Ifng protein_coding protein_coding MGP_CBAJ_T0099866.1 MGP_CBAJ_G0038121.1 mouse_genomes_project 10 78036400 78036533 + Gm24984 snoRNA snoRNA MGP_CBAJ_T0026975.1 MGP_CBAJ_G0017531.1 mouse_genomes_project 10 140427739 140448264 - MGP_CBAJ_P0026975 Tsfm protein_coding protein_coding MGP_CBAJ_T0026976.1 MGP_CBAJ_G0017531.1 mouse_genomes_project 10 140439889 140448302 - MGP_CBAJ_P0026976 Tsfm protein_coding protein_coding MGP_CBAJ_T0026977.1 MGP_CBAJ_G0017531.1 mouse_genomes_project 10 140440002 140442651 - Tsfm protein_coding retained_intron MGP_CBAJ_T0026978.1 MGP_CBAJ_G0017531.1 mouse_genomes_project 10 140440180 140447834 - Tsfm protein_coding processed_transcript MGP_CBAJ_T0026979.1 MGP_CBAJ_G0017531.1 mouse_genomes_project 10 140440462 140448220 - Tsfm protein_coding retained_intron MGP_CBAJ_T0026980.1 MGP_CBAJ_G0017531.1 mouse_genomes_project 10 140441788 140448260 - MGP_CBAJ_P0026980 Tsfm protein_coding protein_coding MGP_CBAJ_T0026981.1 MGP_CBAJ_G0017531.1 mouse_genomes_project 10 140446701 140448264 - Tsfm protein_coding retained_intron MGP_CBAJ_T0026719.1 MGP_CBAJ_G0017441.1 mouse_genomes_project 10 117258221 117484818 - MGP_CBAJ_P0026719 Acss3 protein_coding protein_coding MGP_CBAJ_T0026720.1 MGP_CBAJ_G0017441.1 mouse_genomes_project 10 117292516 117484818 - MGP_CBAJ_P0026720 Acss3 protein_coding protein_coding MGP_CBAJ_T0026721.1 MGP_CBAJ_G0017441.1 mouse_genomes_project 10 117463555 117484799 - Acss3 protein_coding processed_transcript MGP_CBAJ_T0027031.1 MGP_CBAJ_G0017549.1 mouse_genomes_project 10 140773914 140789182 - MGP_CBAJ_P0027031 Mars protein_coding protein_coding MGP_CBAJ_T0027032.1 MGP_CBAJ_G0017549.1 mouse_genomes_project 10 140773915 140789182 - MGP_CBAJ_P0027032 Mars protein_coding protein_coding MGP_CBAJ_T0027033.1 MGP_CBAJ_G0017549.1 mouse_genomes_project 10 140773919 140789074 - Mars protein_coding retained_intron MGP_CBAJ_T0027034.1 MGP_CBAJ_G0017549.1 mouse_genomes_project 10 140773919 140775280 - MGP_CBAJ_P0027034 Mars protein_coding protein_coding MGP_CBAJ_T0027035.1 MGP_CBAJ_G0017549.1 mouse_genomes_project 10 140774042 140775191 - Mars protein_coding retained_intron MGP_CBAJ_T0027036.1 MGP_CBAJ_G0017549.1 mouse_genomes_project 10 140785426 140786364 - Mars protein_coding retained_intron MGP_CBAJ_T0025670.1 MGP_CBAJ_G0017158.1 mouse_genomes_project 10 84792580 84822973 - MGP_CBAJ_P0025670 Pdxk protein_coding protein_coding MGP_CBAJ_T0006019.1 MGP_CBAJ_G0005030.1 mouse_genomes_project 10 71666641 71674415 - 1110002J07Rik lincRNA lincRNA MGP_CBAJ_T0026714.1 MGP_CBAJ_G0017439.1 mouse_genomes_project 10 116024149 116030915 + Ccdc59 protein_coding retained_intron MGP_CBAJ_T0026715.1 MGP_CBAJ_G0017439.1 mouse_genomes_project 10 116024149 116030915 + MGP_CBAJ_P0026715 Ccdc59 protein_coding protein_coding MGP_CBAJ_T0026716.1 MGP_CBAJ_G0017439.1 mouse_genomes_project 10 116024586 116026065 + Ccdc59 protein_coding retained_intron MGP_CBAJ_T0006074.1 MGP_CBAJ_G0005063.1 mouse_genomes_project 10 131393363 131403651 + 1700064J06Rik lincRNA lincRNA MGP_CBAJ_T0024488.1 MGP_CBAJ_G0016822.1 mouse_genomes_project 10 23738626 23749742 - MGP_CBAJ_P0024488 Taar8c protein_coding protein_coding MGP_CBAJ_T0025530.1 MGP_CBAJ_G0017119.1 mouse_genomes_project 10 82632282 82639964 + MGP_CBAJ_P0025530 Spatc1l protein_coding protein_coding MGP_CBAJ_T0025531.1 MGP_CBAJ_G0017119.1 mouse_genomes_project 10 82632319 82639793 + MGP_CBAJ_P0025531 Spatc1l protein_coding protein_coding MGP_CBAJ_T0027304.1 MGP_CBAJ_G0017661.1 mouse_genomes_project 10 143803618 143804624 - MGP_CBAJ_P0027304 Olfr810 protein_coding protein_coding MGP_CBAJ_T0024745.1 MGP_CBAJ_G0016913.1 mouse_genomes_project 10 43422175 43480507 - MGP_CBAJ_P0024745 protein_coding protein_coding MGP_CBAJ_T0098624.1 MGP_CBAJ_G0036879.1 mouse_genomes_project 10 54152727 54152834 + Gm26257 snRNA snRNA MGP_CBAJ_T0009459.1 MGP_CBAJ_G0007597.1 mouse_genomes_project 10 46535395 46535488 + Mir1929 miRNA miRNA MGP_CBAJ_T0027265.1 MGP_CBAJ_G0017632.1 mouse_genomes_project 10 143194860 143195799 + MGP_CBAJ_P0027265 Olfr775 protein_coding protein_coding MGP_CBAJ_T0009461.1 MGP_CBAJ_G0007599.1 mouse_genomes_project 10 47352041 47352121 - Gm23766 miRNA miRNA MGP_CBAJ_T0024212.1 MGP_CBAJ_G0016734.1 mouse_genomes_project 10 5336551 5382392 + MGP_CBAJ_P0024212 Zc3h12d protein_coding protein_coding MGP_CBAJ_T0024082.1 MGP_CBAJ_G0016708.1 mouse_genomes_project 10 931491 1151144 + MGP_CBAJ_P0024082 Mthfd1l protein_coding protein_coding MGP_CBAJ_T0024083.1 MGP_CBAJ_G0016708.1 mouse_genomes_project 10 931504 1161949 + MGP_CBAJ_P0024083 Mthfd1l protein_coding protein_coding MGP_CBAJ_T0024084.1 MGP_CBAJ_G0016708.1 mouse_genomes_project 10 931517 1151144 + MGP_CBAJ_P0024084 Mthfd1l protein_coding protein_coding MGP_CBAJ_T0024085.1 MGP_CBAJ_G0016708.1 mouse_genomes_project 10 1003552 1027656 + Mthfd1l protein_coding processed_transcript MGP_CBAJ_T0009488.1 MGP_CBAJ_G0007626.1 mouse_genomes_project 10 87893735 87893795 + Mir5615-2 miRNA miRNA MGP_CBAJ_T0027298.1 MGP_CBAJ_G0017656.1 mouse_genomes_project 10 143762618 143763615 - MGP_CBAJ_P0027298 Olfr807 protein_coding protein_coding MGP_CBAJ_T0026158.1 MGP_CBAJ_G0017293.1 mouse_genomes_project 10 88240738 88242580 + MGP_CBAJ_P0026158 Smim24 protein_coding protein_coding MGP_CBAJ_T0026159.1 MGP_CBAJ_G0017293.1 mouse_genomes_project 10 88241337 88242825 + Smim24 protein_coding processed_transcript MGP_CBAJ_T0025794.1 MGP_CBAJ_G0017202.1 mouse_genomes_project 10 86458096 86459900 + MGP_CBAJ_P0025794 Cfd protein_coding protein_coding MGP_CBAJ_T0009483.1 MGP_CBAJ_G0007621.1 mouse_genomes_project 10 86904988 86905057 + Mir6911 miRNA miRNA MGP_CBAJ_T0026757.1 MGP_CBAJ_G0017456.1 mouse_genomes_project 10 122455232 122478920 + MGP_CBAJ_P0026757 Nap1l1 protein_coding protein_coding MGP_CBAJ_T0026758.1 MGP_CBAJ_G0017456.1 mouse_genomes_project 10 122462650 122480176 + MGP_CBAJ_P0026758 Nap1l1 protein_coding protein_coding MGP_CBAJ_T0024927.1 MGP_CBAJ_G0016975.1 mouse_genomes_project 10 61530484 61545629 - MGP_CBAJ_P0024927 protein_coding protein_coding MGP_CBAJ_T0025842.1 MGP_CBAJ_G0017216.1 mouse_genomes_project 10 86649912 86704018 - MGP_CBAJ_P0025842 Sbno2 protein_coding unknown_likely_coding MGP_CBAJ_T0025843.1 MGP_CBAJ_G0017216.1 mouse_genomes_project 10 86649912 86704086 - MGP_CBAJ_P0025843 Sbno2 protein_coding protein_coding MGP_CBAJ_T0025130.1 MGP_CBAJ_G0017030.1 mouse_genomes_project 10 66475679 66496192 - MGP_CBAJ_P0025130 Supv3l1 protein_coding protein_coding MGP_CBAJ_T0025131.1 MGP_CBAJ_G0017030.1 mouse_genomes_project 10 66475725 66496137 - MGP_CBAJ_P0025131 Supv3l1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025132.1 MGP_CBAJ_G0017030.1 mouse_genomes_project 10 66475810 66477092 - Supv3l1 protein_coding retained_intron MGP_CBAJ_T0025133.1 MGP_CBAJ_G0017030.1 mouse_genomes_project 10 66475913 66477439 - Supv3l1 protein_coding retained_intron MGP_CBAJ_T0025134.1 MGP_CBAJ_G0017030.1 mouse_genomes_project 10 66478829 66479598 - Supv3l1 protein_coding processed_transcript MGP_CBAJ_T0012295.1 MGP_CBAJ_G0010407.1 mouse_genomes_project 10 129393548 129394047 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0027227.1 MGP_CBAJ_G0017613.1 mouse_genomes_project 10 142592865 142616240 + MGP_CBAJ_P0027227 Pym1 protein_coding protein_coding MGP_CBAJ_T0027228.1 MGP_CBAJ_G0017613.1 mouse_genomes_project 10 142593441 142616240 + MGP_CBAJ_P0027228 Pym1 protein_coding protein_coding MGP_CBAJ_T0009457.1 MGP_CBAJ_G0007595.1 mouse_genomes_project 10 28446086 28446169 - Gm22370 miRNA miRNA MGP_CBAJ_T0026006.1 MGP_CBAJ_G0017252.1 mouse_genomes_project 10 87479632 87519868 + MGP_CBAJ_P0026006 Dot1l protein_coding protein_coding MGP_CBAJ_T0026007.1 MGP_CBAJ_G0017252.1 mouse_genomes_project 10 87479634 87518794 + MGP_CBAJ_P0026007 Dot1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0026008.1 MGP_CBAJ_G0017252.1 mouse_genomes_project 10 87479889 87491027 + Dot1l protein_coding retained_intron MGP_CBAJ_T0026009.1 MGP_CBAJ_G0017252.1 mouse_genomes_project 10 87501983 87518798 + MGP_CBAJ_P0026009 Dot1l protein_coding protein_coding MGP_CBAJ_T0026010.1 MGP_CBAJ_G0017252.1 mouse_genomes_project 10 87509589 87510847 + Dot1l protein_coding retained_intron MGP_CBAJ_T0026011.1 MGP_CBAJ_G0017252.1 mouse_genomes_project 10 87513488 87518754 + MGP_CBAJ_P0026011 Dot1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0026012.1 MGP_CBAJ_G0017252.1 mouse_genomes_project 10 87515860 87518225 + MGP_CBAJ_P0026012 Dot1l protein_coding protein_coding MGP_CBAJ_T0025271.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74664200 75050290 + protein_coding retained_intron MGP_CBAJ_T0025272.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74664200 74865717 + protein_coding processed_transcript MGP_CBAJ_T0025273.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74664200 75223411 + MGP_CBAJ_P0025273 protein_coding protein_coding MGP_CBAJ_T0025274.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74664243 75026668 + protein_coding retained_intron MGP_CBAJ_T0025275.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74664271 75220621 + MGP_CBAJ_P0025275 protein_coding protein_coding MGP_CBAJ_T0025276.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74664275 75220877 + MGP_CBAJ_P0025276 protein_coding protein_coding MGP_CBAJ_T0025277.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74664275 75220877 + MGP_CBAJ_P0025277 protein_coding protein_coding MGP_CBAJ_T0025278.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74664493 74996284 + MGP_CBAJ_P0025278 protein_coding protein_coding MGP_CBAJ_T0025279.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74664636 75219865 + MGP_CBAJ_P0025279 protein_coding protein_coding MGP_CBAJ_T0025280.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74664650 75211636 + MGP_CBAJ_P0025280 protein_coding protein_coding MGP_CBAJ_T0025281.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74664650 75211636 + MGP_CBAJ_P0025281 protein_coding protein_coding MGP_CBAJ_T0025282.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74664650 75211636 + MGP_CBAJ_P0025282 protein_coding protein_coding MGP_CBAJ_T0025283.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74664650 75211636 + MGP_CBAJ_P0025283 protein_coding protein_coding MGP_CBAJ_T0025284.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74664650 75211636 + MGP_CBAJ_P0025284 protein_coding protein_coding MGP_CBAJ_T0025285.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74850815 74854994 + protein_coding retained_intron MGP_CBAJ_T0025286.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74850887 75211634 + MGP_CBAJ_P0025286 protein_coding protein_coding MGP_CBAJ_T0025287.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74850991 75188502 + protein_coding retained_intron MGP_CBAJ_T0025288.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74850995 74993839 + protein_coding retained_intron MGP_CBAJ_T0025289.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74952491 74980274 + protein_coding retained_intron MGP_CBAJ_T0025290.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74952502 75036357 + MGP_CBAJ_P0025290 protein_coding protein_coding MGP_CBAJ_T0025291.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 74954423 75026089 + MGP_CBAJ_P0025291 protein_coding protein_coding MGP_CBAJ_T0025292.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75080636 75219920 + MGP_CBAJ_P0025292 protein_coding protein_coding MGP_CBAJ_T0025293.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75081574 75165059 + MGP_CBAJ_P0025293 protein_coding protein_coding MGP_CBAJ_T0025294.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75102278 75143285 + protein_coding retained_intron MGP_CBAJ_T0025295.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75112848 75113692 + protein_coding retained_intron MGP_CBAJ_T0025296.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75112848 75219956 + MGP_CBAJ_P0025296 protein_coding protein_coding MGP_CBAJ_T0025297.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75112885 75220949 + MGP_CBAJ_P0025297 protein_coding protein_coding MGP_CBAJ_T0025298.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75113126 75220877 + MGP_CBAJ_P0025298 protein_coding protein_coding MGP_CBAJ_T0025299.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75113126 75220877 + MGP_CBAJ_P0025299 protein_coding protein_coding MGP_CBAJ_T0025300.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75113126 75220877 + MGP_CBAJ_P0025300 protein_coding protein_coding MGP_CBAJ_T0025301.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75113158 75211808 + MGP_CBAJ_P0025301 protein_coding protein_coding MGP_CBAJ_T0025302.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75113172 75187772 + protein_coding retained_intron MGP_CBAJ_T0025303.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75113307 75220638 + MGP_CBAJ_P0025303 protein_coding protein_coding MGP_CBAJ_T0025304.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75113433 75220621 + MGP_CBAJ_P0025304 protein_coding protein_coding MGP_CBAJ_T0025305.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75113486 75219994 + MGP_CBAJ_P0025305 protein_coding protein_coding MGP_CBAJ_T0025306.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75164970 75175552 + protein_coding retained_intron MGP_CBAJ_T0025307.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75171719 75192701 + MGP_CBAJ_P0025307 protein_coding protein_coding MGP_CBAJ_T0025308.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75172610 75179372 + MGP_CBAJ_P0025308 protein_coding protein_coding MGP_CBAJ_T0025309.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75173568 75220877 + MGP_CBAJ_P0025309 protein_coding protein_coding MGP_CBAJ_T0025310.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75175373 75192906 + protein_coding retained_intron MGP_CBAJ_T0025311.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75181110 75220623 + MGP_CBAJ_P0025311 protein_coding protein_coding MGP_CBAJ_T0025312.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75183196 75220442 + MGP_CBAJ_P0025312 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025313.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75185352 75191371 + MGP_CBAJ_P0025313 protein_coding protein_coding MGP_CBAJ_T0025314.1 MGP_CBAJ_G0017068.1 mouse_genomes_project 10 75187564 75197926 + protein_coding retained_intron MGP_CBAJ_T0024429.1 MGP_CBAJ_G0016794.1 mouse_genomes_project 10 20578974 20598120 + MGP_CBAJ_P0024429 Aldh8a1 protein_coding protein_coding MGP_CBAJ_T0024430.1 MGP_CBAJ_G0016794.1 mouse_genomes_project 10 20578983 20587084 + Aldh8a1 protein_coding retained_intron MGP_CBAJ_T0024431.1 MGP_CBAJ_G0016794.1 mouse_genomes_project 10 20579030 20590532 + MGP_CBAJ_P0024431 Aldh8a1 protein_coding protein_coding MGP_CBAJ_T0011159.1 MGP_CBAJ_G0009297.1 mouse_genomes_project 10 103777014 103777318 + Gm25266 misc_RNA misc_RNA MGP_CBAJ_T0098649.1 MGP_CBAJ_G0036904.1 mouse_genomes_project 10 113897403 113897512 + Gm25143 snRNA snRNA MGP_CBAJ_T0026523.1 MGP_CBAJ_G0017378.1 mouse_genomes_project 10 99405050 99418640 - MGP_CBAJ_P0026523 Slc25a3 protein_coding protein_coding MGP_CBAJ_T0026524.1 MGP_CBAJ_G0017378.1 mouse_genomes_project 10 99405271 99418538 - MGP_CBAJ_P0026524 Slc25a3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026525.1 MGP_CBAJ_G0017378.1 mouse_genomes_project 10 99405271 99418584 - MGP_CBAJ_P0026525 Slc25a3 protein_coding protein_coding MGP_CBAJ_T0026526.1 MGP_CBAJ_G0017378.1 mouse_genomes_project 10 99405284 99418536 - MGP_CBAJ_P0026526 Slc25a3 protein_coding protein_coding MGP_CBAJ_T0026527.1 MGP_CBAJ_G0017378.1 mouse_genomes_project 10 99405487 99414418 - Slc25a3 protein_coding retained_intron MGP_CBAJ_T0026528.1 MGP_CBAJ_G0017378.1 mouse_genomes_project 10 99410256 99415306 - Slc25a3 protein_coding processed_transcript MGP_CBAJ_T0026529.1 MGP_CBAJ_G0017378.1 mouse_genomes_project 10 99410282 99416804 - Slc25a3 protein_coding retained_intron MGP_CBAJ_T0026530.1 MGP_CBAJ_G0017378.1 mouse_genomes_project 10 99414355 99418603 - Slc25a3 protein_coding retained_intron MGP_CBAJ_T0002964.1 MGP_CBAJ_G0002773.1 mouse_genomes_project 10 64646288 64658009 + Gm26947 antisense antisense MGP_CBAJ_T0098606.1 MGP_CBAJ_G0036861.1 mouse_genomes_project 10 10824531 10824631 - Gm23044 snRNA snRNA MGP_CBAJ_T0025868.1 MGP_CBAJ_G0017219.1 mouse_genomes_project 10 86745725 86749516 + Atp5d protein_coding processed_transcript MGP_CBAJ_T0025869.1 MGP_CBAJ_G0017219.1 mouse_genomes_project 10 86746638 86752938 + MGP_CBAJ_P0025869 Atp5d protein_coding unknown_likely_coding MGP_CBAJ_T0025870.1 MGP_CBAJ_G0017219.1 mouse_genomes_project 10 86748572 86752929 + MGP_CBAJ_P0025870 Atp5d protein_coding protein_coding MGP_CBAJ_T0025871.1 MGP_CBAJ_G0017219.1 mouse_genomes_project 10 86749430 86752934 + MGP_CBAJ_P0025871 Atp5d protein_coding protein_coding MGP_CBAJ_T0025872.1 MGP_CBAJ_G0017219.1 mouse_genomes_project 10 86749485 86752928 + MGP_CBAJ_P0025872 Atp5d protein_coding protein_coding MGP_CBAJ_T0099835.1 MGP_CBAJ_G0038090.1 mouse_genomes_project 10 9905650 9905776 + Gm25011 snoRNA snoRNA MGP_CBAJ_T0025072.1 MGP_CBAJ_G0017018.1 mouse_genomes_project 10 65590783 65603767 + MGP_CBAJ_P0025072 Sar1a protein_coding protein_coding MGP_CBAJ_T0026872.1 MGP_CBAJ_G0017500.1 mouse_genomes_project 10 131126293 131141386 - MGP_CBAJ_P0026872 Dyrk2 protein_coding protein_coding MGP_CBAJ_T0025037.1 MGP_CBAJ_G0017005.1 mouse_genomes_project 10 64451292 64526693 - MGP_CBAJ_P0025037 Unc5b protein_coding protein_coding MGP_CBAJ_T0027254.1 MGP_CBAJ_G0017625.1 mouse_genomes_project 10 142869368 142873426 + MGP_CBAJ_P0027254 Olfr9 protein_coding protein_coding MGP_CBAJ_T0024089.1 MGP_CBAJ_G0016711.1 mouse_genomes_project 10 1473823 1512317 - MGP_CBAJ_P0024089 Rmnd1 protein_coding protein_coding MGP_CBAJ_T0024090.1 MGP_CBAJ_G0016711.1 mouse_genomes_project 10 1475094 1480391 - Rmnd1 protein_coding retained_intron MGP_CBAJ_T0024091.1 MGP_CBAJ_G0016711.1 mouse_genomes_project 10 1475469 1480204 - MGP_CBAJ_P0024091 Rmnd1 protein_coding protein_coding MGP_CBAJ_T0024092.1 MGP_CBAJ_G0016711.1 mouse_genomes_project 10 1475994 1488947 - Rmnd1 protein_coding retained_intron MGP_CBAJ_T0024093.1 MGP_CBAJ_G0016711.1 mouse_genomes_project 10 1501295 1512273 - Rmnd1 protein_coding retained_intron MGP_CBAJ_T0024094.1 MGP_CBAJ_G0016711.1 mouse_genomes_project 10 1502444 1512224 - MGP_CBAJ_P0024094 Rmnd1 protein_coding protein_coding MGP_CBAJ_T0024095.1 MGP_CBAJ_G0016711.1 mouse_genomes_project 10 1507367 1512263 - MGP_CBAJ_P0024095 Rmnd1 protein_coding protein_coding MGP_CBAJ_T0024096.1 MGP_CBAJ_G0016711.1 mouse_genomes_project 10 1507445 1512263 - MGP_CBAJ_P0024096 Rmnd1 protein_coding protein_coding MGP_CBAJ_T0024097.1 MGP_CBAJ_G0016711.1 mouse_genomes_project 10 1508464 1512230 - Rmnd1 protein_coding retained_intron MGP_CBAJ_T0026917.1 MGP_CBAJ_G0017509.1 mouse_genomes_project 10 133423796 133506505 - Msrb3 protein_coding processed_transcript MGP_CBAJ_T0026918.1 MGP_CBAJ_G0017509.1 mouse_genomes_project 10 133423938 133527172 - MGP_CBAJ_P0026918 Msrb3 protein_coding protein_coding MGP_CBAJ_T0026919.1 MGP_CBAJ_G0017509.1 mouse_genomes_project 10 133424112 133563510 - MGP_CBAJ_P0026919 Msrb3 protein_coding protein_coding MGP_CBAJ_T0025152.1 MGP_CBAJ_G0017036.1 mouse_genomes_project 10 66687961 66732918 - MGP_CBAJ_P0025152 Ddx50 protein_coding protein_coding MGP_CBAJ_T0024622.1 MGP_CBAJ_G0016876.1 mouse_genomes_project 10 35406740 35552202 + MGP_CBAJ_P0024622 Frk protein_coding protein_coding MGP_CBAJ_T0024623.1 MGP_CBAJ_G0016876.1 mouse_genomes_project 10 35406740 35552202 + MGP_CBAJ_P0024623 Frk protein_coding protein_coding MGP_CBAJ_T0025422.1 MGP_CBAJ_G0017086.1 mouse_genomes_project 10 81200777 81218623 + MGP_CBAJ_P0025422 Adora2a protein_coding protein_coding MGP_CBAJ_T0006012.1 MGP_CBAJ_G0005027.1 mouse_genomes_project 10 69646967 69647809 - Gm28881 lincRNA lincRNA MGP_CBAJ_T0024493.1 MGP_CBAJ_G0016826.1 mouse_genomes_project 10 24315970 24319207 + MGP_CBAJ_P0024493 Ctgf protein_coding protein_coding MGP_CBAJ_T0024494.1 MGP_CBAJ_G0016826.1 mouse_genomes_project 10 24316254 24319212 + MGP_CBAJ_P0024494 Ctgf protein_coding protein_coding MGP_CBAJ_T0024495.1 MGP_CBAJ_G0016826.1 mouse_genomes_project 10 24316308 24316899 + MGP_CBAJ_P0024495 Ctgf protein_coding protein_coding MGP_CBAJ_T0006078.1 MGP_CBAJ_G0005067.1 mouse_genomes_project 10 142289893 142296887 + A430046D13Rik lincRNA lincRNA MGP_CBAJ_T0024949.1 MGP_CBAJ_G0016985.1 mouse_genomes_project 10 62195624 62437798 + MGP_CBAJ_P0024949 Sh3rf3 protein_coding protein_coding MGP_CBAJ_T0024950.1 MGP_CBAJ_G0016985.1 mouse_genomes_project 10 62195723 62534667 + MGP_CBAJ_P0024950 Sh3rf3 protein_coding protein_coding MGP_CBAJ_T0024951.1 MGP_CBAJ_G0016985.1 mouse_genomes_project 10 62196324 62395022 + Sh3rf3 protein_coding retained_intron MGP_CBAJ_T0024952.1 MGP_CBAJ_G0016985.1 mouse_genomes_project 10 62455271 62497464 + Sh3rf3 protein_coding retained_intron MGP_CBAJ_T0024953.1 MGP_CBAJ_G0016985.1 mouse_genomes_project 10 62472825 62496942 + Sh3rf3 protein_coding processed_transcript MGP_CBAJ_T0025235.1 MGP_CBAJ_G0017059.1 mouse_genomes_project 10 72433618 72435840 + MGP_CBAJ_P0025235 Gm10797 protein_coding protein_coding MGP_CBAJ_T0002979.1 MGP_CBAJ_G0002786.1 mouse_genomes_project 10 82434454 82452073 + 1700094J05Rik antisense antisense MGP_CBAJ_T0002980.1 MGP_CBAJ_G0002786.1 mouse_genomes_project 10 82444031 82444399 + 1700094J05Rik antisense antisense MGP_CBAJ_T0006075.1 MGP_CBAJ_G0005064.1 mouse_genomes_project 10 131793676 131807076 + 1700025F24Rik lincRNA lincRNA MGP_CBAJ_T0027037.1 MGP_CBAJ_G0017550.1 mouse_genomes_project 10 140807549 140813759 + MGP_CBAJ_P0027037 Arhgap9 protein_coding protein_coding MGP_CBAJ_T0026294.1 MGP_CBAJ_G0017323.1 mouse_genomes_project 10 90939836 90993044 - MGP_CBAJ_P0026294 Appl2 protein_coding protein_coding MGP_CBAJ_T0026295.1 MGP_CBAJ_G0017323.1 mouse_genomes_project 10 90940200 90943021 - MGP_CBAJ_P0026295 Appl2 protein_coding protein_coding MGP_CBAJ_T0026296.1 MGP_CBAJ_G0017323.1 mouse_genomes_project 10 90940545 90953061 - MGP_CBAJ_P0026296 Appl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026297.1 MGP_CBAJ_G0017323.1 mouse_genomes_project 10 90941794 90943275 - Appl2 protein_coding retained_intron MGP_CBAJ_T0026298.1 MGP_CBAJ_G0017323.1 mouse_genomes_project 10 90942657 90955932 - Appl2 protein_coding retained_intron MGP_CBAJ_T0026299.1 MGP_CBAJ_G0017323.1 mouse_genomes_project 10 90942761 90955321 - Appl2 protein_coding retained_intron MGP_CBAJ_T0026300.1 MGP_CBAJ_G0017323.1 mouse_genomes_project 10 90947793 90992976 - Appl2 protein_coding retained_intron MGP_CBAJ_T0026301.1 MGP_CBAJ_G0017323.1 mouse_genomes_project 10 90947913 90955779 - Appl2 protein_coding retained_intron MGP_CBAJ_T0026302.1 MGP_CBAJ_G0017323.1 mouse_genomes_project 10 90952659 90955155 - Appl2 protein_coding retained_intron MGP_CBAJ_T0026303.1 MGP_CBAJ_G0017323.1 mouse_genomes_project 10 90958309 90972353 - Appl2 protein_coding processed_transcript MGP_CBAJ_T0026304.1 MGP_CBAJ_G0017323.1 mouse_genomes_project 10 90961469 90992971 - MGP_CBAJ_P0026304 Appl2 protein_coding protein_coding MGP_CBAJ_T0026305.1 MGP_CBAJ_G0017323.1 mouse_genomes_project 10 90964763 90992909 - MGP_CBAJ_P0026305 Appl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026306.1 MGP_CBAJ_G0017323.1 mouse_genomes_project 10 90964877 90981610 - Appl2 protein_coding processed_transcript MGP_CBAJ_T0026307.1 MGP_CBAJ_G0017323.1 mouse_genomes_project 10 90968696 90992981 - MGP_CBAJ_P0026307 Appl2 protein_coding protein_coding MGP_CBAJ_T0025656.1 MGP_CBAJ_G0017154.1 mouse_genomes_project 10 84506722 84587483 - MGP_CBAJ_P0025656 Trappc10 protein_coding protein_coding MGP_CBAJ_T0027018.1 MGP_CBAJ_G0017544.1 mouse_genomes_project 10 140657048 140672316 - MGP_CBAJ_P0027018 Pip4k2c protein_coding protein_coding MGP_CBAJ_T0026383.1 MGP_CBAJ_G0017351.1 mouse_genomes_project 10 94808755 94983344 + MGP_CBAJ_P0026383 1700113H08Rik protein_coding protein_coding MGP_CBAJ_T0026384.1 MGP_CBAJ_G0017351.1 mouse_genomes_project 10 94808756 94983343 + MGP_CBAJ_P0026384 1700113H08Rik protein_coding protein_coding MGP_CBAJ_T0026385.1 MGP_CBAJ_G0017351.1 mouse_genomes_project 10 94958741 94983342 + MGP_CBAJ_P0026385 1700113H08Rik protein_coding protein_coding MGP_CBAJ_T0026465.1 MGP_CBAJ_G0017370.1 mouse_genomes_project 10 97526768 97579252 - MGP_CBAJ_P0026465 Nr1h4 protein_coding protein_coding MGP_CBAJ_T0026466.1 MGP_CBAJ_G0017370.1 mouse_genomes_project 10 97526768 97579243 - MGP_CBAJ_P0026466 Nr1h4 protein_coding protein_coding MGP_CBAJ_T0026467.1 MGP_CBAJ_G0017370.1 mouse_genomes_project 10 97526907 97610129 - MGP_CBAJ_P0026467 Nr1h4 protein_coding protein_coding MGP_CBAJ_T0025029.1 MGP_CBAJ_G0017003.1 mouse_genomes_project 10 63998394 64002209 + MGP_CBAJ_P0025029 Gm17455 protein_coding protein_coding MGP_CBAJ_T0027106.1 MGP_CBAJ_G0017571.1 mouse_genomes_project 10 141476717 141493384 + MGP_CBAJ_P0027106 Rdh19 protein_coding protein_coding MGP_CBAJ_T0025500.1 MGP_CBAJ_G0017110.1 mouse_genomes_project 10 82165216 82215812 + MGP_CBAJ_P0025500 protein_coding protein_coding MGP_CBAJ_T0025194.1 MGP_CBAJ_G0017047.1 mouse_genomes_project 10 67481103 67572546 + MGP_CBAJ_P0025194 Herc4 protein_coding protein_coding MGP_CBAJ_T0025195.1 MGP_CBAJ_G0017047.1 mouse_genomes_project 10 67481266 67572535 + MGP_CBAJ_P0025195 Herc4 protein_coding unknown_likely_coding MGP_CBAJ_T0099828.1 MGP_CBAJ_G0038083.1 mouse_genomes_project 10 1171655 1171787 + Gm25369 snoRNA snoRNA MGP_CBAJ_T0098621.1 MGP_CBAJ_G0036876.1 mouse_genomes_project 10 48774899 48775006 + Gm25740 snRNA snRNA MGP_CBAJ_T0024125.1 MGP_CBAJ_G0016719.1 mouse_genomes_project 10 3058555 3064995 - MGP_CBAJ_P0024125 Fbxo5 protein_coding protein_coding MGP_CBAJ_T0024126.1 MGP_CBAJ_G0016719.1 mouse_genomes_project 10 3061595 3063993 - Fbxo5 protein_coding processed_transcript MGP_CBAJ_T0011146.1 MGP_CBAJ_G0009284.1 mouse_genomes_project 10 53811488 53811778 - Gm23883 misc_RNA misc_RNA MGP_CBAJ_T0000782.1 MGP_CBAJ_G0000719.1 mouse_genomes_project 10 41805047 41810505 - TEC TEC MGP_CBAJ_T0098653.1 MGP_CBAJ_G0036908.1 mouse_genomes_project 10 115118091 115118257 + Gm25587 snRNA snRNA MGP_CBAJ_T0024478.1 MGP_CBAJ_G0016812.1 mouse_genomes_project 10 23548956 23550000 + MGP_CBAJ_P0024478 Taar4 protein_coding protein_coding MGP_CBAJ_T0025420.1 MGP_CBAJ_G0017085.1 mouse_genomes_project 10 81082725 81196235 + MGP_CBAJ_P0025420 Specc1l protein_coding protein_coding MGP_CBAJ_T0025421.1 MGP_CBAJ_G0017085.1 mouse_genomes_project 10 81106062 81196235 + MGP_CBAJ_P0025421 Specc1l protein_coding protein_coding MGP_CBAJ_T0026348.1 MGP_CBAJ_G0017341.1 mouse_genomes_project 10 93570176 93628931 - MGP_CBAJ_P0026348 Bpifc protein_coding protein_coding MGP_CBAJ_T0026349.1 MGP_CBAJ_G0017341.1 mouse_genomes_project 10 93612934 93628892 - MGP_CBAJ_P0026349 Bpifc protein_coding protein_coding MGP_CBAJ_T0006064.1 MGP_CBAJ_G0005057.1 mouse_genomes_project 10 122488604 122489692 - Gm28592 lincRNA lincRNA MGP_CBAJ_T0026829.1 MGP_CBAJ_G0017481.1 mouse_genomes_project 10 128744479 128793461 - MGP_CBAJ_P0026829 Rab3ip protein_coding protein_coding MGP_CBAJ_T0026830.1 MGP_CBAJ_G0017481.1 mouse_genomes_project 10 128745731 128793356 - MGP_CBAJ_P0026830 Rab3ip protein_coding unknown_likely_coding MGP_CBAJ_T0024902.1 MGP_CBAJ_G0016967.1 mouse_genomes_project 10 59543462 59553311 + MGP_CBAJ_P0024902 Msl3l2 protein_coding protein_coding MGP_CBAJ_T0024342.1 MGP_CBAJ_G0016767.1 mouse_genomes_project 10 16777138 16794176 - MGP_CBAJ_P0024342 Abracl protein_coding protein_coding MGP_CBAJ_T0101519.1 MGP_CBAJ_G0039551.1 mouse_genomes_project 10 115672920 115673104 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0025595.1 MGP_CBAJ_G0017133.1 mouse_genomes_project 10 83780991 83819109 + MGP_CBAJ_P0025595 Sumo3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025596.1 MGP_CBAJ_G0017133.1 mouse_genomes_project 10 83781003 83794387 + MGP_CBAJ_P0025596 Sumo3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025597.1 MGP_CBAJ_G0017133.1 mouse_genomes_project 10 83781019 83794320 + MGP_CBAJ_P0025597 Sumo3 protein_coding protein_coding MGP_CBAJ_T0025598.1 MGP_CBAJ_G0017133.1 mouse_genomes_project 10 83781019 83793984 + MGP_CBAJ_P0025598 Sumo3 protein_coding protein_coding MGP_CBAJ_T0025599.1 MGP_CBAJ_G0017133.1 mouse_genomes_project 10 83781115 83793935 + MGP_CBAJ_P0025599 Sumo3 protein_coding protein_coding MGP_CBAJ_T0025600.1 MGP_CBAJ_G0017133.1 mouse_genomes_project 10 83781365 83795099 + MGP_CBAJ_P0025600 Sumo3 protein_coding protein_coding MGP_CBAJ_T0025601.1 MGP_CBAJ_G0017133.1 mouse_genomes_project 10 83784593 83794575 + MGP_CBAJ_P0025601 Sumo3 protein_coding protein_coding MGP_CBAJ_T0025698.1 MGP_CBAJ_G0017178.1 mouse_genomes_project 10 85986786 86011919 + MGP_CBAJ_P0025698 Vmn2r83 protein_coding protein_coding MGP_CBAJ_T0027324.1 MGP_CBAJ_G0017677.1 mouse_genomes_project 10 144486031 144534239 + MGP_CBAJ_P0027324 Tespa1 protein_coding protein_coding MGP_CBAJ_T0025717.1 MGP_CBAJ_G0017182.1 mouse_genomes_project 10 86135656 86145962 - MGP_CBAJ_P0025717 C2cd4c protein_coding protein_coding MGP_CBAJ_T0025718.1 MGP_CBAJ_G0017182.1 mouse_genomes_project 10 86135656 86145955 - MGP_CBAJ_P0025718 C2cd4c protein_coding protein_coding MGP_CBAJ_T0024882.1 MGP_CBAJ_G0016961.1 mouse_genomes_project 10 56473586 56484695 + MGP_CBAJ_P0024882 Pln protein_coding protein_coding MGP_CBAJ_T0024883.1 MGP_CBAJ_G0016961.1 mouse_genomes_project 10 56473586 56484695 + MGP_CBAJ_P0024883 Pln protein_coding protein_coding MGP_CBAJ_T0012273.1 MGP_CBAJ_G0010385.1 mouse_genomes_project 10 65147356 65147718 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0024166.1 MGP_CBAJ_G0016724.1 mouse_genomes_project 10 4321542 4454286 - MGP_CBAJ_P0024166 Ipcef1 protein_coding protein_coding MGP_CBAJ_T0024167.1 MGP_CBAJ_G0016724.1 mouse_genomes_project 10 4326161 4424359 - MGP_CBAJ_P0024167 Ipcef1 protein_coding protein_coding MGP_CBAJ_T0024168.1 MGP_CBAJ_G0016724.1 mouse_genomes_project 10 4349455 4511451 - MGP_CBAJ_P0024168 Ipcef1 protein_coding protein_coding MGP_CBAJ_T0024169.1 MGP_CBAJ_G0016724.1 mouse_genomes_project 10 4349455 4474580 - MGP_CBAJ_P0024169 Ipcef1 protein_coding protein_coding MGP_CBAJ_T0024170.1 MGP_CBAJ_G0016724.1 mouse_genomes_project 10 4355480 4424960 - Ipcef1 protein_coding processed_transcript MGP_CBAJ_T0024171.1 MGP_CBAJ_G0016724.1 mouse_genomes_project 10 4355480 4425111 - Ipcef1 protein_coding processed_transcript MGP_CBAJ_T0024172.1 MGP_CBAJ_G0016724.1 mouse_genomes_project 10 4357748 4474562 - MGP_CBAJ_P0024172 Ipcef1 protein_coding protein_coding MGP_CBAJ_T0024173.1 MGP_CBAJ_G0016724.1 mouse_genomes_project 10 4357828 4425180 - Ipcef1 protein_coding processed_transcript MGP_CBAJ_T0024174.1 MGP_CBAJ_G0016724.1 mouse_genomes_project 10 4399156 4451367 - MGP_CBAJ_P0024174 Ipcef1 protein_coding protein_coding MGP_CBAJ_T0024218.1 MGP_CBAJ_G0016737.1 mouse_genomes_project 10 6332818 6523979 - MGP_CBAJ_P0024218 Sash1 protein_coding protein_coding MGP_CBAJ_T0016840.1 MGP_CBAJ_G0014868.1 mouse_genomes_project 10 1481318 1498571 + Gm16153 processed_transcript processed_transcript MGP_CBAJ_T0024588.1 MGP_CBAJ_G0016856.1 mouse_genomes_project 10 31924634 32007043 - MGP_CBAJ_P0024588 Tpd52l1 protein_coding unknown_likely_coding MGP_CBAJ_T0024589.1 MGP_CBAJ_G0016856.1 mouse_genomes_project 10 31924634 31977614 - MGP_CBAJ_P0024589 Tpd52l1 protein_coding unknown_likely_coding MGP_CBAJ_T0024590.1 MGP_CBAJ_G0016856.1 mouse_genomes_project 10 31924644 32051863 - MGP_CBAJ_P0024590 Tpd52l1 protein_coding protein_coding MGP_CBAJ_T0009479.1 MGP_CBAJ_G0007617.1 mouse_genomes_project 10 84800890 84800953 - Mir6908 miRNA miRNA MGP_CBAJ_T0025694.1 MGP_CBAJ_G0017174.1 mouse_genomes_project 10 85464444 85505185 - MGP_CBAJ_P0025694 2610008E11Rik protein_coding protein_coding MGP_CBAJ_T0026759.1 MGP_CBAJ_G0017457.1 mouse_genomes_project 10 122488315 122490675 + MGP_CBAJ_P0026759 Phlda1 protein_coding protein_coding MGP_CBAJ_T0026760.1 MGP_CBAJ_G0017457.1 mouse_genomes_project 10 122489725 122490195 + Phlda1 protein_coding processed_transcript MGP_CBAJ_T0016847.1 MGP_CBAJ_G0014872.1 mouse_genomes_project 10 38367131 38372948 + 5930403N24Rik processed_transcript retained_intron MGP_CBAJ_T0016848.1 MGP_CBAJ_G0014872.1 mouse_genomes_project 10 38367287 38371261 + 5930403N24Rik processed_transcript processed_transcript MGP_CBAJ_T0016849.1 MGP_CBAJ_G0014872.1 mouse_genomes_project 10 38367643 38380793 + 5930403N24Rik processed_transcript lincRNA MGP_CBAJ_T0027303.1 MGP_CBAJ_G0017660.1 mouse_genomes_project 10 143788923 143789857 + MGP_CBAJ_P0027303 protein_coding protein_coding MGP_CBAJ_T0016881.1 MGP_CBAJ_G0014883.1 mouse_genomes_project 10 140767390 140768483 - Gm4189 processed_transcript processed_transcript MGP_CBAJ_T0016882.1 MGP_CBAJ_G0014883.1 mouse_genomes_project 10 140767390 140768419 - Gm4189 processed_transcript retained_intron MGP_CBAJ_T0012286.1 MGP_CBAJ_G0010398.1 mouse_genomes_project 10 93703241 93703358 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0024886.1 MGP_CBAJ_G0016963.1 mouse_genomes_project 10 56757544 56769797 + MGP_CBAJ_P0024886 Asf1a protein_coding protein_coding MGP_CBAJ_T0026637.1 MGP_CBAJ_G0017408.1 mouse_genomes_project 10 104951209 105068999 + MGP_CBAJ_P0026637 Eea1 protein_coding protein_coding MGP_CBAJ_T0024213.1 MGP_CBAJ_G0016735.1 mouse_genomes_project 10 5429839 5457480 - MGP_CBAJ_P0024213 Tab2 protein_coding protein_coding MGP_CBAJ_T0024214.1 MGP_CBAJ_G0016735.1 mouse_genomes_project 10 5431521 5434660 - Tab2 protein_coding retained_intron MGP_CBAJ_T0024215.1 MGP_CBAJ_G0016735.1 mouse_genomes_project 10 5431631 5435646 - Tab2 protein_coding retained_intron MGP_CBAJ_T0024216.1 MGP_CBAJ_G0016735.1 mouse_genomes_project 10 5435651 5457529 - MGP_CBAJ_P0024216 Tab2 protein_coding protein_coding MGP_CBAJ_T0025747.1 MGP_CBAJ_G0017192.1 mouse_genomes_project 10 86296219 86298062 + MGP_CBAJ_P0025747 Fgf22 protein_coding protein_coding MGP_CBAJ_T0027148.1 MGP_CBAJ_G0017583.1 mouse_genomes_project 10 141926860 141928749 - MGP_CBAJ_P0027148 Spryd4 protein_coding protein_coding MGP_CBAJ_T0025144.1 MGP_CBAJ_G0017034.1 mouse_genomes_project 10 66603387 66648319 - MGP_CBAJ_P0025144 Kif1bp protein_coding protein_coding MGP_CBAJ_T0025145.1 MGP_CBAJ_G0017034.1 mouse_genomes_project 10 66604416 66641081 - MGP_CBAJ_P0025145 Kif1bp protein_coding protein_coding MGP_CBAJ_T0025146.1 MGP_CBAJ_G0017034.1 mouse_genomes_project 10 66626229 66648256 - MGP_CBAJ_P0025146 Kif1bp protein_coding protein_coding MGP_CBAJ_T0025147.1 MGP_CBAJ_G0017034.1 mouse_genomes_project 10 66626303 66633882 - MGP_CBAJ_P0025147 Kif1bp protein_coding nonsense_mediated_decay MGP_CBAJ_T0025148.1 MGP_CBAJ_G0017034.1 mouse_genomes_project 10 66627359 66631339 - Kif1bp protein_coding retained_intron MGP_CBAJ_T0025149.1 MGP_CBAJ_G0017034.1 mouse_genomes_project 10 66633631 66641069 - Kif1bp protein_coding retained_intron MGP_CBAJ_T0025150.1 MGP_CBAJ_G0017034.1 mouse_genomes_project 10 66640715 66648273 - Kif1bp protein_coding retained_intron MGP_CBAJ_T0024817.1 MGP_CBAJ_G0016932.1 mouse_genomes_project 10 46013183 46059234 + MGP_CBAJ_P0024817 Rtn4ip1 protein_coding protein_coding MGP_CBAJ_T0024818.1 MGP_CBAJ_G0016932.1 mouse_genomes_project 10 46013765 46059243 + MGP_CBAJ_P0024818 Rtn4ip1 protein_coding protein_coding MGP_CBAJ_T0024901.1 MGP_CBAJ_G0016966.1 mouse_genomes_project 10 59445330 59672172 - MGP_CBAJ_P0024901 Tbc1d32 protein_coding protein_coding MGP_CBAJ_T0098638.1 MGP_CBAJ_G0036893.1 mouse_genomes_project 10 87134052 87134156 + Gm25044 snRNA snRNA MGP_CBAJ_T0027235.1 MGP_CBAJ_G0017618.1 mouse_genomes_project 10 142677200 142739845 + MGP_CBAJ_P0027235 Sarnp protein_coding protein_coding MGP_CBAJ_T0024560.1 MGP_CBAJ_G0016843.1 mouse_genomes_project 10 29482105 29483020 - MGP_CBAJ_P0024560 Gm9996 protein_coding protein_coding MGP_CBAJ_T0026854.1 MGP_CBAJ_G0017494.1 mouse_genomes_project 10 129723248 129749292 - MGP_CBAJ_P0026854 Mdm2 protein_coding protein_coding MGP_CBAJ_T0026855.1 MGP_CBAJ_G0017494.1 mouse_genomes_project 10 129723248 129749292 - MGP_CBAJ_P0026855 Mdm2 protein_coding protein_coding MGP_CBAJ_T0026856.1 MGP_CBAJ_G0017494.1 mouse_genomes_project 10 129723255 129748556 - MGP_CBAJ_P0026856 Mdm2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026857.1 MGP_CBAJ_G0017494.1 mouse_genomes_project 10 129724469 129749219 - Mdm2 protein_coding retained_intron MGP_CBAJ_T0026858.1 MGP_CBAJ_G0017494.1 mouse_genomes_project 10 129724603 129725881 - Mdm2 protein_coding retained_intron MGP_CBAJ_T0026859.1 MGP_CBAJ_G0017494.1 mouse_genomes_project 10 129731307 129748612 - Mdm2 protein_coding processed_transcript MGP_CBAJ_T0026860.1 MGP_CBAJ_G0017494.1 mouse_genomes_project 10 129732575 129749245 - Mdm2 protein_coding processed_transcript MGP_CBAJ_T0026861.1 MGP_CBAJ_G0017494.1 mouse_genomes_project 10 129738711 129748826 - Mdm2 protein_coding processed_transcript MGP_CBAJ_T0026862.1 MGP_CBAJ_G0017494.1 mouse_genomes_project 10 129748251 129749248 - Mdm2 protein_coding retained_intron MGP_CBAJ_T0027068.1 MGP_CBAJ_G0017558.1 mouse_genomes_project 10 141055388 141064458 - MGP_CBAJ_P0027068 Nxph4 protein_coding protein_coding MGP_CBAJ_T0024823.1 MGP_CBAJ_G0016936.1 mouse_genomes_project 10 46425525 46540011 + MGP_CBAJ_P0024823 Atg5 protein_coding protein_coding MGP_CBAJ_T0027100.1 MGP_CBAJ_G0017568.1 mouse_genomes_project 10 141327443 141372711 + MGP_CBAJ_P0027100 protein_coding protein_coding MGP_CBAJ_T0006000.1 MGP_CBAJ_G0005015.1 mouse_genomes_project 10 38580814 38622974 + Gm26535 lincRNA lincRNA MGP_CBAJ_T0000801.1 MGP_CBAJ_G0000737.1 mouse_genomes_project 10 132848834 132851318 + TEC TEC MGP_CBAJ_T0011158.1 MGP_CBAJ_G0009296.1 mouse_genomes_project 10 100545618 100545727 - Gm27419 misc_RNA misc_RNA MGP_CBAJ_T0024483.1 MGP_CBAJ_G0016817.1 mouse_genomes_project 10 23639328 23640405 + MGP_CBAJ_P0024483 Taar7d protein_coding protein_coding MGP_CBAJ_T0098611.1 MGP_CBAJ_G0036866.1 mouse_genomes_project 10 29708977 29709084 + Gm25596 snRNA snRNA MGP_CBAJ_T0026249.1 MGP_CBAJ_G0017312.1 mouse_genomes_project 10 89846384 89873473 + MGP_CBAJ_P0026249 Tdg protein_coding protein_coding MGP_CBAJ_T0026250.1 MGP_CBAJ_G0017312.1 mouse_genomes_project 10 89846401 89859587 + Tdg protein_coding processed_transcript MGP_CBAJ_T0026251.1 MGP_CBAJ_G0017312.1 mouse_genomes_project 10 89847294 89862472 + MGP_CBAJ_P0026251 Tdg protein_coding protein_coding MGP_CBAJ_T0026252.1 MGP_CBAJ_G0017312.1 mouse_genomes_project 10 89859417 89862488 + Tdg protein_coding retained_intron MGP_CBAJ_T0026253.1 MGP_CBAJ_G0017312.1 mouse_genomes_project 10 89859704 89871409 + MGP_CBAJ_P0026253 Tdg protein_coding nonsense_mediated_decay MGP_CBAJ_T0026254.1 MGP_CBAJ_G0017312.1 mouse_genomes_project 10 89859705 89871216 + MGP_CBAJ_P0026254 Tdg protein_coding protein_coding MGP_CBAJ_T0026255.1 MGP_CBAJ_G0017312.1 mouse_genomes_project 10 89862206 89864595 + Tdg protein_coding retained_intron MGP_CBAJ_T0026256.1 MGP_CBAJ_G0017312.1 mouse_genomes_project 10 89862465 89871632 + MGP_CBAJ_P0026256 Tdg protein_coding protein_coding MGP_CBAJ_T0026257.1 MGP_CBAJ_G0017312.1 mouse_genomes_project 10 89862620 89869854 + Tdg protein_coding retained_intron MGP_CBAJ_T0026258.1 MGP_CBAJ_G0017312.1 mouse_genomes_project 10 89869156 89870505 + Tdg protein_coding retained_intron MGP_CBAJ_T0024821.1 MGP_CBAJ_G0016934.1 mouse_genomes_project 10 46370125 46372356 + MGP_CBAJ_P0024821 protein_coding protein_coding MGP_CBAJ_T0025671.1 MGP_CBAJ_G0017159.1 mouse_genomes_project 10 84843134 84846407 - MGP_CBAJ_P0025671 Gm9978 protein_coding protein_coding MGP_CBAJ_T0099840.1 MGP_CBAJ_G0038095.1 mouse_genomes_project 10 23354619 23354748 - Snora33 snoRNA snoRNA MGP_CBAJ_T0012289.1 MGP_CBAJ_G0010401.1 mouse_genomes_project 10 105476540 105476729 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0026927.1 MGP_CBAJ_G0017514.1 mouse_genomes_project 10 134157435 134235175 - MGP_CBAJ_P0026927 Rassf3 protein_coding protein_coding MGP_CBAJ_T0024708.1 MGP_CBAJ_G0016906.1 mouse_genomes_project 10 43198663 43213843 + MGP_CBAJ_P0024708 Zbtb24 protein_coding protein_coding MGP_CBAJ_T0025068.1 MGP_CBAJ_G0017017.1 mouse_genomes_project 10 65559047 65584642 + MGP_CBAJ_P0025068 Ppa1 protein_coding protein_coding MGP_CBAJ_T0025069.1 MGP_CBAJ_G0017017.1 mouse_genomes_project 10 65559116 65563305 + Ppa1 protein_coding retained_intron MGP_CBAJ_T0025070.1 MGP_CBAJ_G0017017.1 mouse_genomes_project 10 65573161 65575899 + Ppa1 protein_coding processed_transcript MGP_CBAJ_T0025071.1 MGP_CBAJ_G0017017.1 mouse_genomes_project 10 65574162 65576079 + Ppa1 protein_coding retained_intron MGP_CBAJ_T0002986.1 MGP_CBAJ_G0002792.1 mouse_genomes_project 10 87018712 87019974 + Gm15124 antisense antisense MGP_CBAJ_T0024719.1 MGP_CBAJ_G0016908.1 mouse_genomes_project 10 43235725 43240414 - Smpd2 protein_coding retained_intron MGP_CBAJ_T0024722.1 MGP_CBAJ_G0016908.1 mouse_genomes_project 10 43237255 43240205 - Smpd2 protein_coding retained_intron MGP_CBAJ_T0024723.1 MGP_CBAJ_G0016908.1 mouse_genomes_project 10 43237255 43240424 - MGP_CBAJ_P0024723 Smpd2 protein_coding protein_coding MGP_CBAJ_T0024724.1 MGP_CBAJ_G0016908.1 mouse_genomes_project 10 43237261 43240414 - Smpd2 protein_coding retained_intron MGP_CBAJ_T0024725.1 MGP_CBAJ_G0016908.1 mouse_genomes_project 10 43237632 43238329 - Smpd2 protein_coding retained_intron MGP_CBAJ_T0024726.1 MGP_CBAJ_G0016908.1 mouse_genomes_project 10 43237722 43240181 - MGP_CBAJ_P0024726 Smpd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024727.1 MGP_CBAJ_G0016908.1 mouse_genomes_project 10 43238114 43239763 - Smpd2 protein_coding retained_intron MGP_CBAJ_T0024728.1 MGP_CBAJ_G0016908.1 mouse_genomes_project 10 43238442 43240422 - Smpd2 protein_coding retained_intron MGP_CBAJ_T0024729.1 MGP_CBAJ_G0016908.1 mouse_genomes_project 10 43239100 43240453 - Smpd2 protein_coding retained_intron MGP_CBAJ_T0027079.1 MGP_CBAJ_G0017560.1 mouse_genomes_project 10 141187107 141208523 + MGP_CBAJ_P0027079 Stat6 protein_coding protein_coding MGP_CBAJ_T0027080.1 MGP_CBAJ_G0017560.1 mouse_genomes_project 10 141187123 141194969 + MGP_CBAJ_P0027080 Stat6 protein_coding protein_coding MGP_CBAJ_T0027081.1 MGP_CBAJ_G0017560.1 mouse_genomes_project 10 141197295 141202732 + Stat6 protein_coding retained_intron MGP_CBAJ_T0027082.1 MGP_CBAJ_G0017560.1 mouse_genomes_project 10 141204463 141205624 + Stat6 protein_coding retained_intron MGP_CBAJ_T0027083.1 MGP_CBAJ_G0017560.1 mouse_genomes_project 10 141206965 141207753 + Stat6 protein_coding retained_intron MGP_CBAJ_T0027267.1 MGP_CBAJ_G0017634.1 mouse_genomes_project 10 143216032 143218191 - MGP_CBAJ_P0027267 Olfr777 protein_coding protein_coding MGP_CBAJ_T0027268.1 MGP_CBAJ_G0017634.1 mouse_genomes_project 10 143216032 143216968 - MGP_CBAJ_P0027268 Olfr777 protein_coding protein_coding MGP_CBAJ_T0027305.1 MGP_CBAJ_G0017662.1 mouse_genomes_project 10 143818081 143819041 - MGP_CBAJ_P0027305 Olfr811 protein_coding protein_coding MGP_CBAJ_T0099836.1 MGP_CBAJ_G0038091.1 mouse_genomes_project 10 10354490 10354700 + Gm25139 snoRNA snoRNA MGP_CBAJ_T0024219.1 MGP_CBAJ_G0016738.1 mouse_genomes_project 10 7260324 7263458 - MGP_CBAJ_P0024219 Gm9930 protein_coding protein_coding MGP_CBAJ_T0024700.1 MGP_CBAJ_G0016901.1 mouse_genomes_project 10 42514028 42572409 - MGP_CBAJ_P0024700 Cdc40 protein_coding protein_coding MGP_CBAJ_T0024770.1 MGP_CBAJ_G0016918.1 mouse_genomes_project 10 44189195 44378764 - MGP_CBAJ_P0024770 Lace1 protein_coding protein_coding MGP_CBAJ_T0024771.1 MGP_CBAJ_G0016918.1 mouse_genomes_project 10 44189203 44378778 - MGP_CBAJ_P0024771 Lace1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024772.1 MGP_CBAJ_G0016918.1 mouse_genomes_project 10 44190197 44310310 - MGP_CBAJ_P0024772 Lace1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024232.1 MGP_CBAJ_G0016741.1 mouse_genomes_project 10 8141494 8287029 - MGP_CBAJ_P0024232 protein_coding protein_coding MGP_CBAJ_T0024233.1 MGP_CBAJ_G0016741.1 mouse_genomes_project 10 8141500 8287017 - MGP_CBAJ_P0024233 protein_coding protein_coding MGP_CBAJ_T0024234.1 MGP_CBAJ_G0016741.1 mouse_genomes_project 10 8141500 8220071 - MGP_CBAJ_P0024234 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024235.1 MGP_CBAJ_G0016741.1 mouse_genomes_project 10 8141729 8287005 - MGP_CBAJ_P0024235 protein_coding unknown_likely_coding MGP_CBAJ_T0024236.1 MGP_CBAJ_G0016741.1 mouse_genomes_project 10 8205768 8238942 - MGP_CBAJ_P0024236 protein_coding protein_coding MGP_CBAJ_T0024237.1 MGP_CBAJ_G0016741.1 mouse_genomes_project 10 8206426 8287017 - MGP_CBAJ_P0024237 protein_coding protein_coding MGP_CBAJ_T0026062.1 MGP_CBAJ_G0017271.1 mouse_genomes_project 10 87895034 87920304 + MGP_CBAJ_P0026062 Map2k2 protein_coding protein_coding MGP_CBAJ_T0026063.1 MGP_CBAJ_G0017271.1 mouse_genomes_project 10 87895066 87919490 + MGP_CBAJ_P0026063 Map2k2 protein_coding protein_coding MGP_CBAJ_T0026064.1 MGP_CBAJ_G0017271.1 mouse_genomes_project 10 87895091 87919452 + MGP_CBAJ_P0026064 Map2k2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026065.1 MGP_CBAJ_G0017271.1 mouse_genomes_project 10 87895464 87914732 + MGP_CBAJ_P0026065 Map2k2 protein_coding protein_coding MGP_CBAJ_T0026066.1 MGP_CBAJ_G0017271.1 mouse_genomes_project 10 87914218 87914934 + Map2k2 protein_coding retained_intron MGP_CBAJ_T0026067.1 MGP_CBAJ_G0017271.1 mouse_genomes_project 10 87916460 87918169 + Map2k2 protein_coding retained_intron MGP_CBAJ_T0026068.1 MGP_CBAJ_G0017271.1 mouse_genomes_project 10 87917766 87919534 + Map2k2 protein_coding retained_intron MGP_CBAJ_T0012285.1 MGP_CBAJ_G0010397.1 mouse_genomes_project 10 89423615 89424245 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099855.1 MGP_CBAJ_G0038110.1 mouse_genomes_project 10 49079318 49079449 - Gm23481 snoRNA snoRNA MGP_CBAJ_T0025240.1 MGP_CBAJ_G0017061.1 mouse_genomes_project 10 72884258 72950414 + MGP_CBAJ_P0025240 Rtkn2 protein_coding protein_coding MGP_CBAJ_T0025241.1 MGP_CBAJ_G0017061.1 mouse_genomes_project 10 72884286 72950410 + MGP_CBAJ_P0025241 Rtkn2 protein_coding protein_coding MGP_CBAJ_T0025242.1 MGP_CBAJ_G0017061.1 mouse_genomes_project 10 72884293 72968697 + MGP_CBAJ_P0025242 Rtkn2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025243.1 MGP_CBAJ_G0017061.1 mouse_genomes_project 10 72884386 72968700 + MGP_CBAJ_P0025243 Rtkn2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025244.1 MGP_CBAJ_G0017061.1 mouse_genomes_project 10 72884403 72948848 + MGP_CBAJ_P0025244 Rtkn2 protein_coding protein_coding MGP_CBAJ_T0025245.1 MGP_CBAJ_G0017061.1 mouse_genomes_project 10 72950513 72960064 + Rtkn2 protein_coding processed_transcript MGP_CBAJ_T0024800.1 MGP_CBAJ_G0016925.1 mouse_genomes_project 10 45189832 45191684 + MGP_CBAJ_P0024800 9030612E09Rik protein_coding protein_coding MGP_CBAJ_T0024182.1 MGP_CBAJ_G0016728.1 mouse_genomes_project 10 5102353 5144365 - MGP_CBAJ_P0024182 Pcmt1 protein_coding protein_coding MGP_CBAJ_T0024183.1 MGP_CBAJ_G0016728.1 mouse_genomes_project 10 5103886 5144670 - MGP_CBAJ_P0024183 Pcmt1 protein_coding protein_coding MGP_CBAJ_T0024184.1 MGP_CBAJ_G0016728.1 mouse_genomes_project 10 5103886 5144326 - MGP_CBAJ_P0024184 Pcmt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024185.1 MGP_CBAJ_G0016728.1 mouse_genomes_project 10 5111091 5144323 - MGP_CBAJ_P0024185 Pcmt1 protein_coding protein_coding MGP_CBAJ_T0024186.1 MGP_CBAJ_G0016728.1 mouse_genomes_project 10 5113018 5144670 - Pcmt1 protein_coding retained_intron MGP_CBAJ_T0024187.1 MGP_CBAJ_G0016728.1 mouse_genomes_project 10 5117833 5161848 - MGP_CBAJ_P0024187 Pcmt1 protein_coding protein_coding MGP_CBAJ_T0024188.1 MGP_CBAJ_G0016728.1 mouse_genomes_project 10 5123322 5129574 - MGP_CBAJ_P0024188 Pcmt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024189.1 MGP_CBAJ_G0016728.1 mouse_genomes_project 10 5124729 5144326 - Pcmt1 protein_coding retained_intron MGP_CBAJ_T0026837.1 MGP_CBAJ_G0017488.1 mouse_genomes_project 10 129143911 129150329 - MGP_CBAJ_P0026837 9530003J23Rik protein_coding protein_coding MGP_CBAJ_T0026838.1 MGP_CBAJ_G0017488.1 mouse_genomes_project 10 129145435 129150378 - MGP_CBAJ_P0026838 9530003J23Rik protein_coding protein_coding MGP_CBAJ_T0027209.1 MGP_CBAJ_G0017605.1 mouse_genomes_project 10 142362820 142387096 - MGP_CBAJ_P0027209 Erbb3 protein_coding protein_coding MGP_CBAJ_T0025209.1 MGP_CBAJ_G0017053.1 mouse_genomes_project 10 68287388 68467788 - MGP_CBAJ_P0025209 Lrrtm3 protein_coding protein_coding MGP_CBAJ_T0025210.1 MGP_CBAJ_G0017053.1 mouse_genomes_project 10 68288806 68467791 - Lrrtm3 protein_coding processed_transcript MGP_CBAJ_T0025211.1 MGP_CBAJ_G0017053.1 mouse_genomes_project 10 68465009 68467761 - Lrrtm3 protein_coding retained_intron MGP_CBAJ_T0025212.1 MGP_CBAJ_G0017053.1 mouse_genomes_project 10 68466567 68467764 - MGP_CBAJ_P0025212 Lrrtm3 protein_coding protein_coding MGP_CBAJ_T0026809.1 MGP_CBAJ_G0017478.1 mouse_genomes_project 10 128158505 128227862 - MGP_CBAJ_P0026809 Kcnmb4 protein_coding protein_coding MGP_CBAJ_T0026810.1 MGP_CBAJ_G0017478.1 mouse_genomes_project 10 128178663 128227419 - MGP_CBAJ_P0026810 Kcnmb4 protein_coding protein_coding MGP_CBAJ_T0026811.1 MGP_CBAJ_G0017478.1 mouse_genomes_project 10 128214769 128227406 - MGP_CBAJ_P0026811 Kcnmb4 protein_coding protein_coding MGP_CBAJ_T0006057.1 MGP_CBAJ_G0005052.1 mouse_genomes_project 10 104313539 104324803 + 5730420D15Rik lincRNA lincRNA MGP_CBAJ_T0098652.1 MGP_CBAJ_G0036907.1 mouse_genomes_project 10 114918385 114918490 - Gm25522 snRNA snRNA MGP_CBAJ_T0025106.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66294966 66382713 - MGP_CBAJ_P0025106 Hk1 protein_coding protein_coding MGP_CBAJ_T0025107.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66295215 66423873 - MGP_CBAJ_P0025107 Hk1 protein_coding protein_coding MGP_CBAJ_T0025108.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66295219 66400532 - MGP_CBAJ_P0025108 Hk1 protein_coding protein_coding MGP_CBAJ_T0025109.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66296020 66384893 - MGP_CBAJ_P0025109 Hk1 protein_coding protein_coding MGP_CBAJ_T0025110.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66314625 66323451 - Hk1 protein_coding retained_intron MGP_CBAJ_T0025111.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66329077 66358218 - MGP_CBAJ_P0025111 Hk1 protein_coding protein_coding MGP_CBAJ_T0025112.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66329310 66367363 - MGP_CBAJ_P0025112 Hk1 protein_coding protein_coding MGP_CBAJ_T0025113.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66329937 66384870 - MGP_CBAJ_P0025113 Hk1 protein_coding protein_coding MGP_CBAJ_T0025114.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66330182 66384879 - Hk1 protein_coding retained_intron MGP_CBAJ_T0025115.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66355300 66423817 - MGP_CBAJ_P0025115 Hk1 protein_coding protein_coding MGP_CBAJ_T0025116.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66355300 66419065 - MGP_CBAJ_P0025116 Hk1 protein_coding protein_coding MGP_CBAJ_T0025117.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66355300 66423817 - MGP_CBAJ_P0025117 Hk1 protein_coding protein_coding MGP_CBAJ_T0025118.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66355300 66419065 - MGP_CBAJ_P0025118 Hk1 protein_coding protein_coding MGP_CBAJ_T0025119.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66355300 66419065 - MGP_CBAJ_P0025119 Hk1 protein_coding protein_coding MGP_CBAJ_T0025120.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66355300 66419065 - MGP_CBAJ_P0025120 Hk1 protein_coding protein_coding MGP_CBAJ_T0025121.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66355300 66419065 - MGP_CBAJ_P0025121 Hk1 protein_coding protein_coding MGP_CBAJ_T0025122.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66355300 66419065 - MGP_CBAJ_P0025122 Hk1 protein_coding protein_coding MGP_CBAJ_T0025123.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66355300 66423817 - MGP_CBAJ_P0025123 Hk1 protein_coding protein_coding MGP_CBAJ_T0025124.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66355300 66419065 - MGP_CBAJ_P0025124 Hk1 protein_coding protein_coding MGP_CBAJ_T0025125.1 MGP_CBAJ_G0017028.1 mouse_genomes_project 10 66355345 66404444 - MGP_CBAJ_P0025125 Hk1 protein_coding protein_coding MGP_CBAJ_T0006034.1 MGP_CBAJ_G0005042.1 mouse_genomes_project 10 92102239 92105492 - Gm17249 lincRNA lincRNA MGP_CBAJ_T0011162.1 MGP_CBAJ_G0009300.1 mouse_genomes_project 10 126405778 126406103 - Gm25319 misc_RNA misc_RNA MGP_CBAJ_T0006024.1 MGP_CBAJ_G0005035.1 mouse_genomes_project 10 84146854 84149552 + 1700009J07Rik lincRNA lincRNA MGP_CBAJ_T0006025.1 MGP_CBAJ_G0005035.1 mouse_genomes_project 10 84146857 84149549 + 1700009J07Rik lincRNA lincRNA MGP_CBAJ_T0006026.1 MGP_CBAJ_G0005035.1 mouse_genomes_project 10 84146865 84147949 + 1700009J07Rik lincRNA lincRNA MGP_CBAJ_T0009453.1 MGP_CBAJ_G0007591.1 mouse_genomes_project 10 19321297 19321405 - Mir6413 miRNA miRNA MGP_CBAJ_T0024731.1 MGP_CBAJ_G0016910.1 mouse_genomes_project 10 43275962 43295058 + MGP_CBAJ_P0024731 Cd164 protein_coding protein_coding MGP_CBAJ_T0024732.1 MGP_CBAJ_G0016910.1 mouse_genomes_project 10 43276049 43281815 + Cd164 protein_coding retained_intron MGP_CBAJ_T0024733.1 MGP_CBAJ_G0016910.1 mouse_genomes_project 10 43276440 43293056 + MGP_CBAJ_P0024733 Cd164 protein_coding protein_coding MGP_CBAJ_T0024734.1 MGP_CBAJ_G0016910.1 mouse_genomes_project 10 43276592 43283419 + Cd164 protein_coding processed_transcript MGP_CBAJ_T0025181.1 MGP_CBAJ_G0017043.1 mouse_genomes_project 10 67199095 67208217 - MGP_CBAJ_P0025181 Hnrnph3 protein_coding protein_coding MGP_CBAJ_T0025182.1 MGP_CBAJ_G0017043.1 mouse_genomes_project 10 67199095 67208217 - MGP_CBAJ_P0025182 Hnrnph3 protein_coding protein_coding MGP_CBAJ_T0025183.1 MGP_CBAJ_G0017043.1 mouse_genomes_project 10 67199859 67208540 - MGP_CBAJ_P0025183 Hnrnph3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025184.1 MGP_CBAJ_G0017043.1 mouse_genomes_project 10 67199862 67200600 - Hnrnph3 protein_coding retained_intron MGP_CBAJ_T0025185.1 MGP_CBAJ_G0017043.1 mouse_genomes_project 10 67200849 67202516 - Hnrnph3 protein_coding retained_intron MGP_CBAJ_T0025186.1 MGP_CBAJ_G0017043.1 mouse_genomes_project 10 67202238 67208170 - MGP_CBAJ_P0025186 Hnrnph3 protein_coding protein_coding MGP_CBAJ_T0024878.1 MGP_CBAJ_G0016958.1 mouse_genomes_project 10 55481161 55504489 + MGP_CBAJ_P0024878 Nus1 protein_coding protein_coding MGP_CBAJ_T0024879.1 MGP_CBAJ_G0016958.1 mouse_genomes_project 10 55492535 55496977 + MGP_CBAJ_P0024879 Nus1 protein_coding protein_coding MGP_CBAJ_T0024474.1 MGP_CBAJ_G0016808.1 mouse_genomes_project 10 23469330 23484946 + MGP_CBAJ_P0024474 Vnn1 protein_coding protein_coding MGP_CBAJ_T0026206.1 MGP_CBAJ_G0017302.1 mouse_genomes_project 10 88489219 88495921 - Tle6 protein_coding processed_transcript MGP_CBAJ_T0026207.1 MGP_CBAJ_G0017302.1 mouse_genomes_project 10 88489219 88501417 - MGP_CBAJ_P0026207 Tle6 protein_coding protein_coding MGP_CBAJ_T0026208.1 MGP_CBAJ_G0017302.1 mouse_genomes_project 10 88489220 88493731 - Tle6 protein_coding retained_intron MGP_CBAJ_T0026209.1 MGP_CBAJ_G0017302.1 mouse_genomes_project 10 88489220 88491031 - Tle6 protein_coding processed_transcript MGP_CBAJ_T0026210.1 MGP_CBAJ_G0017302.1 mouse_genomes_project 10 88489220 88501442 - MGP_CBAJ_P0026210 Tle6 protein_coding protein_coding MGP_CBAJ_T0026211.1 MGP_CBAJ_G0017302.1 mouse_genomes_project 10 88489222 88495676 - Tle6 protein_coding processed_transcript MGP_CBAJ_T0026212.1 MGP_CBAJ_G0017302.1 mouse_genomes_project 10 88489448 88491134 - Tle6 protein_coding retained_intron MGP_CBAJ_T0026213.1 MGP_CBAJ_G0017302.1 mouse_genomes_project 10 88492234 88493560 - Tle6 protein_coding retained_intron MGP_CBAJ_T0026214.1 MGP_CBAJ_G0017302.1 mouse_genomes_project 10 88492554 88494124 - Tle6 protein_coding retained_intron MGP_CBAJ_T0026215.1 MGP_CBAJ_G0017302.1 mouse_genomes_project 10 88493524 88495669 - Tle6 protein_coding processed_transcript MGP_CBAJ_T0026216.1 MGP_CBAJ_G0017302.1 mouse_genomes_project 10 88493544 88495662 - Tle6 protein_coding processed_transcript MGP_CBAJ_T0026217.1 MGP_CBAJ_G0017302.1 mouse_genomes_project 10 88494268 88495698 - Tle6 protein_coding processed_transcript MGP_CBAJ_T0026218.1 MGP_CBAJ_G0017302.1 mouse_genomes_project 10 88494308 88501399 - MGP_CBAJ_P0026218 Tle6 protein_coding protein_coding MGP_CBAJ_T0026219.1 MGP_CBAJ_G0017302.1 mouse_genomes_project 10 88494311 88501615 - MGP_CBAJ_P0026219 Tle6 protein_coding protein_coding MGP_CBAJ_T0012294.1 MGP_CBAJ_G0010406.1 mouse_genomes_project 10 116423061 116423454 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0025775.1 MGP_CBAJ_G0017199.1 mouse_genomes_project 10 86416995 86436123 - MGP_CBAJ_P0025775 Plppr3 protein_coding protein_coding MGP_CBAJ_T0025778.1 MGP_CBAJ_G0017199.1 mouse_genomes_project 10 86423890 86435919 - Plppr3 protein_coding retained_intron MGP_CBAJ_T0025779.1 MGP_CBAJ_G0017199.1 mouse_genomes_project 10 86423890 86436123 - Plppr3 protein_coding retained_intron MGP_CBAJ_T0025780.1 MGP_CBAJ_G0017199.1 mouse_genomes_project 10 86423890 86436187 - MGP_CBAJ_P0025780 Plppr3 protein_coding protein_coding MGP_CBAJ_T0025781.1 MGP_CBAJ_G0017199.1 mouse_genomes_project 10 86425521 86426391 - Plppr3 protein_coding retained_intron MGP_CBAJ_T0025782.1 MGP_CBAJ_G0017199.1 mouse_genomes_project 10 86425541 86435777 - MGP_CBAJ_P0025782 Plppr3 protein_coding protein_coding MGP_CBAJ_T0025783.1 MGP_CBAJ_G0017199.1 mouse_genomes_project 10 86425547 86435961 - MGP_CBAJ_P0025783 Plppr3 protein_coding protein_coding MGP_CBAJ_T0025784.1 MGP_CBAJ_G0017199.1 mouse_genomes_project 10 86425963 86435942 - Plppr3 protein_coding processed_transcript MGP_CBAJ_T0025785.1 MGP_CBAJ_G0017199.1 mouse_genomes_project 10 86426017 86435952 - MGP_CBAJ_P0025785 Plppr3 protein_coding protein_coding MGP_CBAJ_T0025786.1 MGP_CBAJ_G0017199.1 mouse_genomes_project 10 86426568 86435923 - MGP_CBAJ_P0025786 Plppr3 protein_coding protein_coding MGP_CBAJ_T0025668.1 MGP_CBAJ_G0017156.1 mouse_genomes_project 10 84738347 84753933 - MGP_CBAJ_P0025668 Rrp1 protein_coding protein_coding MGP_CBAJ_T0026808.1 MGP_CBAJ_G0017477.1 mouse_genomes_project 10 128015881 128120446 + MGP_CBAJ_P0026808 Ptprb protein_coding protein_coding MGP_CBAJ_T0027099.1 MGP_CBAJ_G0017567.1 mouse_genomes_project 10 141327377 141335950 + MGP_CBAJ_P0027099 Rdh1 protein_coding protein_coding MGP_CBAJ_T0016865.1 MGP_CBAJ_G0014875.1 mouse_genomes_project 10 65481888 65519021 - Gm28447 processed_transcript antisense MGP_CBAJ_T0016866.1 MGP_CBAJ_G0014875.1 mouse_genomes_project 10 65491159 65492136 - Gm28447 processed_transcript retained_intron MGP_CBAJ_T0025729.1 MGP_CBAJ_G0017189.1 mouse_genomes_project 10 86243287 86250683 + MGP_CBAJ_P0025729 Bsg protein_coding protein_coding MGP_CBAJ_T0025730.1 MGP_CBAJ_G0017189.1 mouse_genomes_project 10 86243295 86249516 + Bsg protein_coding processed_transcript MGP_CBAJ_T0025731.1 MGP_CBAJ_G0017189.1 mouse_genomes_project 10 86243305 86250765 + MGP_CBAJ_P0025731 Bsg protein_coding protein_coding MGP_CBAJ_T0025732.1 MGP_CBAJ_G0017189.1 mouse_genomes_project 10 86248892 86250498 + Bsg protein_coding retained_intron MGP_CBAJ_T0025473.1 MGP_CBAJ_G0017098.1 mouse_genomes_project 10 81725152 81742548 - MGP_CBAJ_P0025473 Gstt1 protein_coding protein_coding MGP_CBAJ_T0025474.1 MGP_CBAJ_G0017098.1 mouse_genomes_project 10 81725153 81742460 - MGP_CBAJ_P0025474 Gstt1 protein_coding unknown_likely_coding MGP_CBAJ_T0025475.1 MGP_CBAJ_G0017098.1 mouse_genomes_project 10 81725323 81738764 - MGP_CBAJ_P0025475 Gstt1 protein_coding protein_coding MGP_CBAJ_T0025476.1 MGP_CBAJ_G0017098.1 mouse_genomes_project 10 81728134 81741695 - MGP_CBAJ_P0025476 Gstt1 protein_coding protein_coding MGP_CBAJ_T0026241.1 MGP_CBAJ_G0017306.1 mouse_genomes_project 10 89109370 89126845 + MGP_CBAJ_P0026241 Zfp873 protein_coding protein_coding MGP_CBAJ_T0024929.1 MGP_CBAJ_G0016977.1 mouse_genomes_project 10 61538393 61542220 - MGP_CBAJ_P0024929 protein_coding protein_coding MGP_CBAJ_T0098608.1 MGP_CBAJ_G0036863.1 mouse_genomes_project 10 15772063 15772160 + Gm25382 snRNA snRNA MGP_CBAJ_T0098636.1 MGP_CBAJ_G0036891.1 mouse_genomes_project 10 86476381 86476488 + Gm24019 snRNA snRNA MGP_CBAJ_T0101254.1 MGP_CBAJ_G0039390.1 mouse_genomes_project 10 141432107 141470725 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101255.1 MGP_CBAJ_G0039390.1 mouse_genomes_project 10 141432107 141470730 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0026122.1 MGP_CBAJ_G0017286.1 mouse_genomes_project 10 88164807 88174659 + MGP_CBAJ_P0026122 Tbxa2r protein_coding protein_coding MGP_CBAJ_T0000792.1 MGP_CBAJ_G0000728.1 mouse_genomes_project 10 110288322 110289089 - TEC TEC MGP_CBAJ_T0011163.1 MGP_CBAJ_G0009301.1 mouse_genomes_project 10 126808029 126808335 - Gm22794 misc_RNA misc_RNA MGP_CBAJ_T0025685.1 MGP_CBAJ_G0017169.1 mouse_genomes_project 10 85330936 85332451 + MGP_CBAJ_P0025685 protein_coding protein_coding MGP_CBAJ_T0098634.1 MGP_CBAJ_G0036889.1 mouse_genomes_project 10 81541555 81541668 - Gm26402 snRNA snRNA MGP_CBAJ_T0027189.1 MGP_CBAJ_G0017598.1 mouse_genomes_project 10 142226292 142275858 + MGP_CBAJ_P0027189 Smarcc2 protein_coding protein_coding MGP_CBAJ_T0027190.1 MGP_CBAJ_G0017598.1 mouse_genomes_project 10 142226292 142275858 + MGP_CBAJ_P0027190 Smarcc2 protein_coding protein_coding MGP_CBAJ_T0027191.1 MGP_CBAJ_G0017598.1 mouse_genomes_project 10 142226292 142275858 + MGP_CBAJ_P0027191 Smarcc2 protein_coding protein_coding MGP_CBAJ_T0016841.1 MGP_CBAJ_G0014869.1 mouse_genomes_project 10 5237954 5255879 - Gm20470 processed_transcript processed_transcript MGP_CBAJ_T0006069.1 MGP_CBAJ_G0005061.1 mouse_genomes_project 10 128515496 128524954 - 1700030O20Rik lincRNA lincRNA MGP_CBAJ_T0026785.1 MGP_CBAJ_G0017470.1 mouse_genomes_project 10 126945076 126961179 - MGP_CBAJ_P0026785 Thap2 protein_coding protein_coding MGP_CBAJ_T0011141.1 MGP_CBAJ_G0009279.1 mouse_genomes_project 10 11166258 11166495 - Gm27741 misc_RNA misc_RNA MGP_CBAJ_T0009509.1 MGP_CBAJ_G0007647.1 mouse_genomes_project 10 119960232 119960315 - Gm44495 miRNA miRNA MGP_CBAJ_T0025493.1 MGP_CBAJ_G0017105.1 mouse_genomes_project 10 81901730 81903883 + MGP_CBAJ_P0025493 Chchd10 protein_coding protein_coding MGP_CBAJ_T0099848.1 MGP_CBAJ_G0038103.1 mouse_genomes_project 10 39525005 39525137 + Gm24889 snoRNA snoRNA MGP_CBAJ_T0025975.1 MGP_CBAJ_G0017241.1 mouse_genomes_project 10 87224522 87229487 - Rexo1 protein_coding retained_intron MGP_CBAJ_T0025976.1 MGP_CBAJ_G0017241.1 mouse_genomes_project 10 87224525 87249505 - MGP_CBAJ_P0025976 Rexo1 protein_coding protein_coding MGP_CBAJ_T0025977.1 MGP_CBAJ_G0017241.1 mouse_genomes_project 10 87225269 87231572 - MGP_CBAJ_P0025977 Rexo1 protein_coding protein_coding MGP_CBAJ_T0025978.1 MGP_CBAJ_G0017241.1 mouse_genomes_project 10 87225873 87230453 - Rexo1 protein_coding retained_intron MGP_CBAJ_T0025979.1 MGP_CBAJ_G0017241.1 mouse_genomes_project 10 87225873 87230121 - Rexo1 protein_coding retained_intron MGP_CBAJ_T0025980.1 MGP_CBAJ_G0017241.1 mouse_genomes_project 10 87226216 87227914 - MGP_CBAJ_P0025980 Rexo1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025981.1 MGP_CBAJ_G0017241.1 mouse_genomes_project 10 87229647 87233113 - MGP_CBAJ_P0025981 Rexo1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025982.1 MGP_CBAJ_G0017241.1 mouse_genomes_project 10 87230977 87233111 - Rexo1 protein_coding processed_transcript MGP_CBAJ_T0099850.1 MGP_CBAJ_G0038105.1 mouse_genomes_project 10 41670439 41670568 + Gm25613 snoRNA snoRNA MGP_CBAJ_T0024615.1 MGP_CBAJ_G0016873.1 mouse_genomes_project 10 35191541 35218802 - Nt5dc1 protein_coding processed_transcript MGP_CBAJ_T0024617.1 MGP_CBAJ_G0016873.1 mouse_genomes_project 10 35208716 35338289 - MGP_CBAJ_P0024617 Nt5dc1 protein_coding protein_coding MGP_CBAJ_T0024618.1 MGP_CBAJ_G0016873.1 mouse_genomes_project 10 35208716 35338276 - MGP_CBAJ_P0024618 Nt5dc1 protein_coding protein_coding MGP_CBAJ_T0024619.1 MGP_CBAJ_G0016873.1 mouse_genomes_project 10 35209372 35338265 - Nt5dc1 protein_coding processed_transcript MGP_CBAJ_T0024621.1 MGP_CBAJ_G0016873.1 mouse_genomes_project 10 35317003 35338218 - MGP_CBAJ_P0024621 Nt5dc1 protein_coding protein_coding MGP_CBAJ_T0099845.1 MGP_CBAJ_G0038100.1 mouse_genomes_project 10 29754663 29754791 + Gm24286 snoRNA snoRNA MGP_CBAJ_T0009463.1 MGP_CBAJ_G0007601.1 mouse_genomes_project 10 55053212 55053349 + Gm24084 miRNA miRNA MGP_CBAJ_T0026344.1 MGP_CBAJ_G0017339.1 mouse_genomes_project 10 93526012 93528022 + MGP_CBAJ_P0026344 Ascl4 protein_coding protein_coding MGP_CBAJ_T0026345.1 MGP_CBAJ_G0017339.1 mouse_genomes_project 10 93527105 93554216 + MGP_CBAJ_P0026345 Ascl4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026337.1 MGP_CBAJ_G0017337.1 mouse_genomes_project 10 93461741 93479474 + MGP_CBAJ_P0026337 Pwp1 protein_coding protein_coding MGP_CBAJ_T0026338.1 MGP_CBAJ_G0017337.1 mouse_genomes_project 10 93461794 93475066 + Pwp1 protein_coding retained_intron MGP_CBAJ_T0026339.1 MGP_CBAJ_G0017337.1 mouse_genomes_project 10 93461816 93472011 + MGP_CBAJ_P0026339 Pwp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026340.1 MGP_CBAJ_G0017337.1 mouse_genomes_project 10 93466164 93474865 + Pwp1 protein_coding retained_intron MGP_CBAJ_T0026109.1 MGP_CBAJ_G0017282.1 mouse_genomes_project 10 88098370 88103445 + MGP_CBAJ_P0026109 Apba3 protein_coding protein_coding MGP_CBAJ_T0027281.1 MGP_CBAJ_G0017645.1 mouse_genomes_project 10 143489848 143490787 + MGP_CBAJ_P0027281 Olfr791 protein_coding protein_coding MGP_CBAJ_T0025346.1 MGP_CBAJ_G0017078.1 mouse_genomes_project 10 76758039 76796091 + MGP_CBAJ_P0025346 Ipmk protein_coding protein_coding MGP_CBAJ_T0025347.1 MGP_CBAJ_G0017078.1 mouse_genomes_project 10 76758112 76792206 + MGP_CBAJ_P0025347 Ipmk protein_coding protein_coding MGP_CBAJ_T0025348.1 MGP_CBAJ_G0017078.1 mouse_genomes_project 10 76758112 76792445 + MGP_CBAJ_P0025348 Ipmk protein_coding nonsense_mediated_decay MGP_CBAJ_T0025349.1 MGP_CBAJ_G0017078.1 mouse_genomes_project 10 76758112 76787632 + MGP_CBAJ_P0025349 Ipmk protein_coding protein_coding MGP_CBAJ_T0025350.1 MGP_CBAJ_G0017078.1 mouse_genomes_project 10 76758119 76774142 + Ipmk protein_coding retained_intron MGP_CBAJ_T0025351.1 MGP_CBAJ_G0017078.1 mouse_genomes_project 10 76791954 76852455 + MGP_CBAJ_P0025351 Ipmk protein_coding nonsense_mediated_decay MGP_CBAJ_T0025352.1 MGP_CBAJ_G0017078.1 mouse_genomes_project 10 76823748 76852602 + Ipmk protein_coding processed_transcript MGP_CBAJ_T0012242.1 MGP_CBAJ_G0010354.1 mouse_genomes_project 10 9293037 9293766 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0027028.1 MGP_CBAJ_G0017548.1 mouse_genomes_project 10 140768468 140773982 + MGP_CBAJ_P0027028 Ddit3 protein_coding protein_coding MGP_CBAJ_T0027029.1 MGP_CBAJ_G0017548.1 mouse_genomes_project 10 140768487 140773759 + MGP_CBAJ_P0027029 Ddit3 protein_coding protein_coding MGP_CBAJ_T0027030.1 MGP_CBAJ_G0017548.1 mouse_genomes_project 10 140768488 140772277 + Ddit3 protein_coding retained_intron MGP_CBAJ_T0011151.1 MGP_CBAJ_G0009289.1 mouse_genomes_project 10 100476532 100476687 - Gm27544 misc_RNA misc_RNA MGP_CBAJ_T0025550.1 MGP_CBAJ_G0017124.1 mouse_genomes_project 10 83123435 83136915 + MGP_CBAJ_P0025550 Gm10787 protein_coding protein_coding MGP_CBAJ_T0026842.1 MGP_CBAJ_G0017492.1 mouse_genomes_project 10 129289307 129325910 - MGP_CBAJ_P0026842 Cpsf6 protein_coding protein_coding MGP_CBAJ_T0026843.1 MGP_CBAJ_G0017492.1 mouse_genomes_project 10 129293673 129325913 - MGP_CBAJ_P0026843 Cpsf6 protein_coding protein_coding MGP_CBAJ_T0026844.1 MGP_CBAJ_G0017492.1 mouse_genomes_project 10 129293676 129325869 - MGP_CBAJ_P0026844 Cpsf6 protein_coding protein_coding MGP_CBAJ_T0026845.1 MGP_CBAJ_G0017492.1 mouse_genomes_project 10 129294008 129307866 - MGP_CBAJ_P0026845 Cpsf6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026846.1 MGP_CBAJ_G0017492.1 mouse_genomes_project 10 129298472 129325868 - MGP_CBAJ_P0026846 Cpsf6 protein_coding protein_coding MGP_CBAJ_T0026847.1 MGP_CBAJ_G0017492.1 mouse_genomes_project 10 129300193 129300724 - MGP_CBAJ_P0026847 Cpsf6 protein_coding protein_coding MGP_CBAJ_T0026848.1 MGP_CBAJ_G0017492.1 mouse_genomes_project 10 129303558 129310155 - Cpsf6 protein_coding retained_intron MGP_CBAJ_T0026849.1 MGP_CBAJ_G0017492.1 mouse_genomes_project 10 129313052 129328949 - MGP_CBAJ_P0026849 Cpsf6 protein_coding protein_coding MGP_CBAJ_T0026786.1 MGP_CBAJ_G0017471.1 mouse_genomes_project 10 126961702 127015241 + MGP_CBAJ_P0026786 Zfc3h1 protein_coding protein_coding MGP_CBAJ_T0026787.1 MGP_CBAJ_G0017471.1 mouse_genomes_project 10 127007239 127015240 + Zfc3h1 protein_coding retained_intron MGP_CBAJ_T0026788.1 MGP_CBAJ_G0017471.1 mouse_genomes_project 10 127008441 127013343 + Zfc3h1 protein_coding retained_intron MGP_CBAJ_T0026789.1 MGP_CBAJ_G0017471.1 mouse_genomes_project 10 127013547 127014231 + Zfc3h1 protein_coding retained_intron MGP_CBAJ_T0024513.1 MGP_CBAJ_G0016831.1 mouse_genomes_project 10 25007457 25084229 - Akap7 protein_coding processed_transcript MGP_CBAJ_T0024514.1 MGP_CBAJ_G0016831.1 mouse_genomes_project 10 25007457 25037827 - MGP_CBAJ_P0024514 Akap7 protein_coding protein_coding MGP_CBAJ_T0024515.1 MGP_CBAJ_G0016831.1 mouse_genomes_project 10 25008489 25150864 - MGP_CBAJ_P0024515 Akap7 protein_coding protein_coding MGP_CBAJ_T0024516.1 MGP_CBAJ_G0016831.1 mouse_genomes_project 10 25060205 25141335 - MGP_CBAJ_P0024516 Akap7 protein_coding unknown_likely_coding MGP_CBAJ_T0024517.1 MGP_CBAJ_G0016831.1 mouse_genomes_project 10 25116353 25147800 - MGP_CBAJ_P0024517 Akap7 protein_coding protein_coding MGP_CBAJ_T0024518.1 MGP_CBAJ_G0016831.1 mouse_genomes_project 10 25131026 25150807 - MGP_CBAJ_P0024518 Akap7 protein_coding protein_coding MGP_CBAJ_T0024519.1 MGP_CBAJ_G0016831.1 mouse_genomes_project 10 25135619 25148773 - MGP_CBAJ_P0024519 Akap7 protein_coding protein_coding MGP_CBAJ_T0024520.1 MGP_CBAJ_G0016831.1 mouse_genomes_project 10 25135720 25161410 - MGP_CBAJ_P0024520 Akap7 protein_coding protein_coding MGP_CBAJ_T0026894.1 MGP_CBAJ_G0017503.1 mouse_genomes_project 10 132577918 132618185 - MGP_CBAJ_P0026894 Helb protein_coding protein_coding MGP_CBAJ_T0026895.1 MGP_CBAJ_G0017503.1 mouse_genomes_project 10 132581591 132591558 - Helb protein_coding retained_intron MGP_CBAJ_T0026896.1 MGP_CBAJ_G0017503.1 mouse_genomes_project 10 132581653 132618063 - MGP_CBAJ_P0026896 Helb protein_coding nonsense_mediated_decay MGP_CBAJ_T0006070.1 MGP_CBAJ_G0005062.1 mouse_genomes_project 10 128811191 128813881 + D630029K05Rik lincRNA lincRNA MGP_CBAJ_T0006071.1 MGP_CBAJ_G0005062.1 mouse_genomes_project 10 128811224 128814067 + D630029K05Rik lincRNA lincRNA MGP_CBAJ_T0006072.1 MGP_CBAJ_G0005062.1 mouse_genomes_project 10 128812239 128814197 + D630029K05Rik lincRNA lincRNA MGP_CBAJ_T0006073.1 MGP_CBAJ_G0005062.1 mouse_genomes_project 10 128812758 128815590 + D630029K05Rik lincRNA lincRNA MGP_CBAJ_T0024428.1 MGP_CBAJ_G0016793.1 mouse_genomes_project 10 20491532 20498497 + MGP_CBAJ_P0024428 Gm9923 protein_coding protein_coding MGP_CBAJ_T0026639.1 MGP_CBAJ_G0017410.1 mouse_genomes_project 10 106667378 106710526 + MGP_CBAJ_P0026639 Dcn protein_coding protein_coding MGP_CBAJ_T0026640.1 MGP_CBAJ_G0017410.1 mouse_genomes_project 10 106670228 106710526 + MGP_CBAJ_P0026640 Dcn protein_coding protein_coding MGP_CBAJ_T0026755.1 MGP_CBAJ_G0017454.1 mouse_genomes_project 10 122094005 122240272 + MGP_CBAJ_P0026755 Osbpl8 protein_coding protein_coding MGP_CBAJ_T0002959.1 MGP_CBAJ_G0002768.1 mouse_genomes_project 10 44686326 44686809 - Gm15200 antisense antisense MGP_CBAJ_T0026867.1 MGP_CBAJ_G0017498.1 mouse_genomes_project 10 130253035 130280600 + MGP_CBAJ_P0026867 Mdm1 protein_coding protein_coding MGP_CBAJ_T0026868.1 MGP_CBAJ_G0017498.1 mouse_genomes_project 10 130253035 130280600 + MGP_CBAJ_P0026868 Mdm1 protein_coding protein_coding MGP_CBAJ_T0026869.1 MGP_CBAJ_G0017498.1 mouse_genomes_project 10 130253035 130280600 + MGP_CBAJ_P0026869 Mdm1 protein_coding protein_coding MGP_CBAJ_T0026870.1 MGP_CBAJ_G0017498.1 mouse_genomes_project 10 130253035 130280600 + MGP_CBAJ_P0026870 Mdm1 protein_coding protein_coding MGP_CBAJ_T0098661.1 MGP_CBAJ_G0036916.1 mouse_genomes_project 10 140920923 140921032 - Gm23819 snRNA snRNA MGP_CBAJ_T0011165.1 MGP_CBAJ_G0009303.1 mouse_genomes_project 10 143110089 143110394 - Gm25807 misc_RNA misc_RNA MGP_CBAJ_T0025049.1 MGP_CBAJ_G0017008.1 mouse_genomes_project 10 64951580 64974020 + MGP_CBAJ_P0025049 Tbata protein_coding protein_coding MGP_CBAJ_T0025050.1 MGP_CBAJ_G0017008.1 mouse_genomes_project 10 64951590 64963176 + MGP_CBAJ_P0025050 Tbata protein_coding protein_coding MGP_CBAJ_T0025051.1 MGP_CBAJ_G0017008.1 mouse_genomes_project 10 64951612 64974025 + MGP_CBAJ_P0025051 Tbata protein_coding protein_coding MGP_CBAJ_T0025052.1 MGP_CBAJ_G0017008.1 mouse_genomes_project 10 64953996 64965791 + MGP_CBAJ_P0025052 Tbata protein_coding nonsense_mediated_decay MGP_CBAJ_T0025053.1 MGP_CBAJ_G0017008.1 mouse_genomes_project 10 64954888 64963173 + Tbata protein_coding processed_transcript MGP_CBAJ_T0025054.1 MGP_CBAJ_G0017008.1 mouse_genomes_project 10 64954888 64963173 + Tbata protein_coding processed_transcript MGP_CBAJ_T0025055.1 MGP_CBAJ_G0017008.1 mouse_genomes_project 10 64954888 64963173 + Tbata protein_coding processed_transcript MGP_CBAJ_T0025056.1 MGP_CBAJ_G0017008.1 mouse_genomes_project 10 64954888 64963172 + MGP_CBAJ_P0025056 Tbata protein_coding protein_coding MGP_CBAJ_T0025057.1 MGP_CBAJ_G0017008.1 mouse_genomes_project 10 64955014 64963173 + Tbata protein_coding processed_transcript MGP_CBAJ_T0025058.1 MGP_CBAJ_G0017008.1 mouse_genomes_project 10 64955563 64974023 + MGP_CBAJ_P0025058 Tbata protein_coding nonsense_mediated_decay MGP_CBAJ_T0026913.1 MGP_CBAJ_G0017507.1 mouse_genomes_project 10 132912030 133051502 - MGP_CBAJ_P0026913 Hmga2 protein_coding protein_coding MGP_CBAJ_T0026914.1 MGP_CBAJ_G0017507.1 mouse_genomes_project 10 132912030 133051502 - MGP_CBAJ_P0026914 Hmga2 protein_coding protein_coding MGP_CBAJ_T0026915.1 MGP_CBAJ_G0017507.1 mouse_genomes_project 10 133045322 133051325 - Hmga2 protein_coding retained_intron MGP_CBAJ_T0024850.1 MGP_CBAJ_G0016944.1 mouse_genomes_project 10 53500129 53792341 + MGP_CBAJ_P0024850 Ascc3 protein_coding unknown_likely_coding MGP_CBAJ_T0101017.1 MGP_CBAJ_G0039256.1 mouse_genomes_project 10 94652877 94656115 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0098256.1 MGP_CBAJ_G0036528.1 mouse_genomes_project 10 133451000 133452130 - Gm15961 sense_intronic sense_intronic MGP_CBAJ_T0026641.1 MGP_CBAJ_G0017411.1 mouse_genomes_project 10 106754666 106771352 + MGP_CBAJ_P0026641 Lum protein_coding protein_coding MGP_CBAJ_T0026549.1 MGP_CBAJ_G0017382.1 mouse_genomes_project 10 101708501 101804684 + MGP_CBAJ_P0026549 Cdk17 protein_coding protein_coding MGP_CBAJ_T0006080.1 MGP_CBAJ_G0005069.1 mouse_genomes_project 10 142845298 142854473 + 9030616G12Rik lincRNA lincRNA MGP_CBAJ_T0026839.1 MGP_CBAJ_G0017489.1 mouse_genomes_project 10 129161001 129163133 + MGP_CBAJ_P0026839 Gm10936 protein_coding protein_coding MGP_CBAJ_T0025039.1 MGP_CBAJ_G0017007.1 mouse_genomes_project 10 64853830 64922759 - MGP_CBAJ_P0025039 Sgpl1 protein_coding protein_coding MGP_CBAJ_T0025040.1 MGP_CBAJ_G0017007.1 mouse_genomes_project 10 64853830 64922729 - MGP_CBAJ_P0025040 Sgpl1 protein_coding protein_coding MGP_CBAJ_T0025041.1 MGP_CBAJ_G0017007.1 mouse_genomes_project 10 64853833 64922729 - MGP_CBAJ_P0025041 Sgpl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025042.1 MGP_CBAJ_G0017007.1 mouse_genomes_project 10 64856013 64858314 - Sgpl1 protein_coding retained_intron MGP_CBAJ_T0025043.1 MGP_CBAJ_G0017007.1 mouse_genomes_project 10 64859383 64860666 - Sgpl1 protein_coding retained_intron MGP_CBAJ_T0025044.1 MGP_CBAJ_G0017007.1 mouse_genomes_project 10 64878310 64922788 - MGP_CBAJ_P0025044 Sgpl1 protein_coding protein_coding MGP_CBAJ_T0025045.1 MGP_CBAJ_G0017007.1 mouse_genomes_project 10 64880224 64922761 - MGP_CBAJ_P0025045 Sgpl1 protein_coding protein_coding MGP_CBAJ_T0025046.1 MGP_CBAJ_G0017007.1 mouse_genomes_project 10 64884461 64922737 - Sgpl1 protein_coding processed_transcript MGP_CBAJ_T0025047.1 MGP_CBAJ_G0017007.1 mouse_genomes_project 10 64890336 64921915 - MGP_CBAJ_P0025047 Sgpl1 protein_coding protein_coding MGP_CBAJ_T0025048.1 MGP_CBAJ_G0017007.1 mouse_genomes_project 10 64920911 64922689 - Sgpl1 protein_coding retained_intron MGP_CBAJ_T0026446.1 MGP_CBAJ_G0017365.1 mouse_genomes_project 10 96709568 96718692 + MGP_CBAJ_P0026446 Arl1 protein_coding protein_coding MGP_CBAJ_T0026447.1 MGP_CBAJ_G0017365.1 mouse_genomes_project 10 96709778 96726195 + MGP_CBAJ_P0026447 Arl1 protein_coding protein_coding MGP_CBAJ_T0026448.1 MGP_CBAJ_G0017365.1 mouse_genomes_project 10 96710271 96727390 + MGP_CBAJ_P0026448 Arl1 protein_coding protein_coding MGP_CBAJ_T0098629.1 MGP_CBAJ_G0036884.1 mouse_genomes_project 10 61669391 61669498 - Gm23058 snRNA snRNA MGP_CBAJ_T0026518.1 MGP_CBAJ_G0017377.1 mouse_genomes_project 10 99363320 99384990 + MGP_CBAJ_P0026518 Ikbip protein_coding protein_coding MGP_CBAJ_T0026519.1 MGP_CBAJ_G0017377.1 mouse_genomes_project 10 99363437 99378418 + MGP_CBAJ_P0026519 Ikbip protein_coding protein_coding MGP_CBAJ_T0026520.1 MGP_CBAJ_G0017377.1 mouse_genomes_project 10 99363486 99373003 + Ikbip protein_coding processed_transcript MGP_CBAJ_T0026521.1 MGP_CBAJ_G0017377.1 mouse_genomes_project 10 99363500 99373586 + Ikbip protein_coding retained_intron MGP_CBAJ_T0026522.1 MGP_CBAJ_G0017377.1 mouse_genomes_project 10 99375738 99384478 + Ikbip protein_coding processed_transcript MGP_CBAJ_T0024463.1 MGP_CBAJ_G0016803.1 mouse_genomes_project 10 22292533 22295381 - MGP_CBAJ_P0024463 Tcf21 protein_coding protein_coding MGP_CBAJ_T0026609.1 MGP_CBAJ_G0017398.1 mouse_genomes_project 10 103052715 103194740 + Tmcc3 protein_coding retained_intron MGP_CBAJ_T0026610.1 MGP_CBAJ_G0017398.1 mouse_genomes_project 10 103052783 103362122 + MGP_CBAJ_P0026610 Tmcc3 protein_coding protein_coding MGP_CBAJ_T0026611.1 MGP_CBAJ_G0017398.1 mouse_genomes_project 10 103052896 103131213 + Tmcc3 protein_coding processed_transcript MGP_CBAJ_T0026612.1 MGP_CBAJ_G0017398.1 mouse_genomes_project 10 103288428 103374299 + MGP_CBAJ_P0026612 Tmcc3 protein_coding protein_coding MGP_CBAJ_T0026613.1 MGP_CBAJ_G0017398.1 mouse_genomes_project 10 103326656 103362248 + MGP_CBAJ_P0026613 Tmcc3 protein_coding protein_coding MGP_CBAJ_T0026614.1 MGP_CBAJ_G0017398.1 mouse_genomes_project 10 103332077 103361993 + MGP_CBAJ_P0026614 Tmcc3 protein_coding protein_coding MGP_CBAJ_T0026615.1 MGP_CBAJ_G0017398.1 mouse_genomes_project 10 103332097 103372112 + MGP_CBAJ_P0026615 Tmcc3 protein_coding protein_coding MGP_CBAJ_T0026616.1 MGP_CBAJ_G0017398.1 mouse_genomes_project 10 103358582 103371443 + MGP_CBAJ_P0026616 Tmcc3 protein_coding protein_coding MGP_CBAJ_T0026617.1 MGP_CBAJ_G0017398.1 mouse_genomes_project 10 103359588 103372123 + MGP_CBAJ_P0026617 Tmcc3 protein_coding protein_coding MGP_CBAJ_T0003029.1 MGP_CBAJ_G0002821.1 mouse_genomes_project 10 132263986 132298097 - Grip1os1 antisense antisense MGP_CBAJ_T0003030.1 MGP_CBAJ_G0002821.1 mouse_genomes_project 10 132292881 132297984 - Grip1os1 antisense antisense MGP_CBAJ_T0025586.1 MGP_CBAJ_G0017132.1 mouse_genomes_project 10 83756643 83773527 + MGP_CBAJ_P0025586 Pttg1ip protein_coding protein_coding MGP_CBAJ_T0025587.1 MGP_CBAJ_G0017132.1 mouse_genomes_project 10 83756679 83762224 + Pttg1ip protein_coding retained_intron MGP_CBAJ_T0025588.1 MGP_CBAJ_G0017132.1 mouse_genomes_project 10 83756681 83768694 + MGP_CBAJ_P0025588 Pttg1ip protein_coding nonsense_mediated_decay MGP_CBAJ_T0025589.1 MGP_CBAJ_G0017132.1 mouse_genomes_project 10 83756726 83772130 + MGP_CBAJ_P0025589 Pttg1ip protein_coding protein_coding MGP_CBAJ_T0025590.1 MGP_CBAJ_G0017132.1 mouse_genomes_project 10 83756745 83767706 + MGP_CBAJ_P0025590 Pttg1ip protein_coding nonsense_mediated_decay MGP_CBAJ_T0025591.1 MGP_CBAJ_G0017132.1 mouse_genomes_project 10 83757332 83772064 + MGP_CBAJ_P0025591 Pttg1ip protein_coding protein_coding MGP_CBAJ_T0025592.1 MGP_CBAJ_G0017132.1 mouse_genomes_project 10 83758868 83767794 + MGP_CBAJ_P0025592 Pttg1ip protein_coding protein_coding MGP_CBAJ_T0025593.1 MGP_CBAJ_G0017132.1 mouse_genomes_project 10 83764188 83772027 + Pttg1ip protein_coding retained_intron MGP_CBAJ_T0025594.1 MGP_CBAJ_G0017132.1 mouse_genomes_project 10 83767131 83771925 + Pttg1ip protein_coding retained_intron MGP_CBAJ_T0005996.1 MGP_CBAJ_G0005011.1 mouse_genomes_project 10 21079029 21095986 - Platr6 lincRNA lincRNA MGP_CBAJ_T0009527.1 MGP_CBAJ_G0007665.1 mouse_genomes_project 10 142307487 142307550 - Mir6916 miRNA miRNA MGP_CBAJ_T0026436.1 MGP_CBAJ_G0017363.1 mouse_genomes_project 10 96455346 96551879 - MGP_CBAJ_P0026436 Mybpc1 protein_coding protein_coding MGP_CBAJ_T0026437.1 MGP_CBAJ_G0017363.1 mouse_genomes_project 10 96455349 96462631 - Mybpc1 protein_coding retained_intron MGP_CBAJ_T0026438.1 MGP_CBAJ_G0017363.1 mouse_genomes_project 10 96455406 96551752 - MGP_CBAJ_P0026438 Mybpc1 protein_coding protein_coding MGP_CBAJ_T0026439.1 MGP_CBAJ_G0017363.1 mouse_genomes_project 10 96456454 96477330 - MGP_CBAJ_P0026439 Mybpc1 protein_coding protein_coding MGP_CBAJ_T0026440.1 MGP_CBAJ_G0017363.1 mouse_genomes_project 10 96465634 96477382 - Mybpc1 protein_coding retained_intron MGP_CBAJ_T0026441.1 MGP_CBAJ_G0017363.1 mouse_genomes_project 10 96465725 96496080 - MGP_CBAJ_P0026441 Mybpc1 protein_coding protein_coding MGP_CBAJ_T0025989.1 MGP_CBAJ_G0017245.1 mouse_genomes_project 10 87299752 87315656 + MGP_CBAJ_P0025989 Scamp4 protein_coding protein_coding MGP_CBAJ_T0025990.1 MGP_CBAJ_G0017245.1 mouse_genomes_project 10 87300123 87314836 + MGP_CBAJ_P0025990 Scamp4 protein_coding protein_coding MGP_CBAJ_T0098626.1 MGP_CBAJ_G0036881.1 mouse_genomes_project 10 57511710 57511817 - Gm26177 snRNA snRNA MGP_CBAJ_T0026982.1 MGP_CBAJ_G0017532.1 mouse_genomes_project 10 140448468 140460002 - MGP_CBAJ_P0026982 Mettl21b protein_coding protein_coding MGP_CBAJ_T0024709.1 MGP_CBAJ_G0016907.1 mouse_genomes_project 10 43226397 43237116 + MGP_CBAJ_P0024709 Mical1 protein_coding protein_coding MGP_CBAJ_T0024710.1 MGP_CBAJ_G0016907.1 mouse_genomes_project 10 43226397 43237114 + MGP_CBAJ_P0024710 Mical1 protein_coding protein_coding MGP_CBAJ_T0024711.1 MGP_CBAJ_G0016907.1 mouse_genomes_project 10 43226419 43235309 + Mical1 protein_coding retained_intron MGP_CBAJ_T0024712.1 MGP_CBAJ_G0016907.1 mouse_genomes_project 10 43226451 43237116 + MGP_CBAJ_P0024712 Mical1 protein_coding protein_coding MGP_CBAJ_T0024713.1 MGP_CBAJ_G0016907.1 mouse_genomes_project 10 43226460 43237116 + MGP_CBAJ_P0024713 Mical1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024714.1 MGP_CBAJ_G0016907.1 mouse_genomes_project 10 43227162 43228269 + MGP_CBAJ_P0024714 Mical1 protein_coding protein_coding MGP_CBAJ_T0024715.1 MGP_CBAJ_G0016907.1 mouse_genomes_project 10 43228561 43231249 + Mical1 protein_coding retained_intron MGP_CBAJ_T0024716.1 MGP_CBAJ_G0016907.1 mouse_genomes_project 10 43230071 43231242 + Mical1 protein_coding retained_intron MGP_CBAJ_T0024717.1 MGP_CBAJ_G0016907.1 mouse_genomes_project 10 43231790 43232800 + Mical1 protein_coding retained_intron MGP_CBAJ_T0024718.1 MGP_CBAJ_G0016907.1 mouse_genomes_project 10 43234157 43235155 + Mical1 protein_coding retained_intron MGP_CBAJ_T0024720.1 MGP_CBAJ_G0016907.1 mouse_genomes_project 10 43236194 43236804 + Mical1 protein_coding retained_intron MGP_CBAJ_T0024721.1 MGP_CBAJ_G0016907.1 mouse_genomes_project 10 43236455 43237114 + Mical1 protein_coding retained_intron MGP_CBAJ_T0026836.1 MGP_CBAJ_G0017487.1 mouse_genomes_project 10 129124575 129133853 - MGP_CBAJ_P0026836 Yeats4 protein_coding protein_coding MGP_CBAJ_T0025611.1 MGP_CBAJ_G0017140.1 mouse_genomes_project 10 83919818 83920181 + MGP_CBAJ_P0025611 Gm10100 protein_coding protein_coding MGP_CBAJ_T0024254.1 MGP_CBAJ_G0016746.1 mouse_genomes_project 10 9160047 9176691 + MGP_CBAJ_P0024254 Fbxo30 protein_coding protein_coding MGP_CBAJ_T0024255.1 MGP_CBAJ_G0016746.1 mouse_genomes_project 10 9160304 9174157 + MGP_CBAJ_P0024255 Fbxo30 protein_coding protein_coding MGP_CBAJ_T0025805.1 MGP_CBAJ_G0017206.1 mouse_genomes_project 10 86485808 86489711 + MGP_CBAJ_P0025805 Kiss1r protein_coding unknown_likely_coding MGP_CBAJ_T0025345.1 MGP_CBAJ_G0017077.1 mouse_genomes_project 10 76740643 76755231 - MGP_CBAJ_P0025345 Cisd1 protein_coding protein_coding MGP_CBAJ_T0026069.1 MGP_CBAJ_G0017272.1 mouse_genomes_project 10 87930795 87940123 + MGP_CBAJ_P0026069 Zbtb7a protein_coding protein_coding MGP_CBAJ_T0026070.1 MGP_CBAJ_G0017272.1 mouse_genomes_project 10 87931846 87947991 + MGP_CBAJ_P0026070 Zbtb7a protein_coding protein_coding MGP_CBAJ_T0026071.1 MGP_CBAJ_G0017272.1 mouse_genomes_project 10 87932124 87944070 + MGP_CBAJ_P0026071 Zbtb7a protein_coding protein_coding MGP_CBAJ_T0026072.1 MGP_CBAJ_G0017272.1 mouse_genomes_project 10 87932141 87939734 + MGP_CBAJ_P0026072 Zbtb7a protein_coding protein_coding MGP_CBAJ_T0026073.1 MGP_CBAJ_G0017272.1 mouse_genomes_project 10 87932153 87948764 + MGP_CBAJ_P0026073 Zbtb7a protein_coding protein_coding MGP_CBAJ_T0026074.1 MGP_CBAJ_G0017272.1 mouse_genomes_project 10 87933549 87944085 + MGP_CBAJ_P0026074 Zbtb7a protein_coding protein_coding MGP_CBAJ_T0026121.1 MGP_CBAJ_G0017285.1 mouse_genomes_project 10 88157178 88162327 + MGP_CBAJ_P0026121 Cactin protein_coding protein_coding MGP_CBAJ_T0026387.1 MGP_CBAJ_G0017353.1 mouse_genomes_project 10 95326565 95398579 + MGP_CBAJ_P0026387 Pah protein_coding protein_coding MGP_CBAJ_T0026388.1 MGP_CBAJ_G0017353.1 mouse_genomes_project 10 95326700 95398477 + MGP_CBAJ_P0026388 Pah protein_coding protein_coding MGP_CBAJ_T0026389.1 MGP_CBAJ_G0017353.1 mouse_genomes_project 10 95326797 95398298 + MGP_CBAJ_P0026389 Pah protein_coding protein_coding MGP_CBAJ_T0026390.1 MGP_CBAJ_G0017353.1 mouse_genomes_project 10 95354547 95384582 + MGP_CBAJ_P0026390 Pah protein_coding protein_coding MGP_CBAJ_T0024177.1 MGP_CBAJ_G0016726.1 mouse_genomes_project 10 4958499 5014812 - MGP_CBAJ_P0024177 Ulbp1 protein_coding protein_coding MGP_CBAJ_T0098620.1 MGP_CBAJ_G0036875.1 mouse_genomes_project 10 47517082 47517145 + Gm27723 snRNA snRNA MGP_CBAJ_T0097895.1 MGP_CBAJ_G0036168.1 mouse_genomes_project 10 96683694 96683810 - n-R5s79 rRNA rRNA MGP_CBAJ_T0024398.1 MGP_CBAJ_G0016785.1 mouse_genomes_project 10 19158333 19301394 + MGP_CBAJ_P0024398 Map7 protein_coding protein_coding MGP_CBAJ_T0024399.1 MGP_CBAJ_G0016785.1 mouse_genomes_project 10 19158782 19304284 + MGP_CBAJ_P0024399 Map7 protein_coding protein_coding MGP_CBAJ_T0024400.1 MGP_CBAJ_G0016785.1 mouse_genomes_project 10 19184051 19279973 + MGP_CBAJ_P0024400 Map7 protein_coding unknown_likely_coding MGP_CBAJ_T0026033.1 MGP_CBAJ_G0017262.1 mouse_genomes_project 10 87641255 87642775 - MGP_CBAJ_P0026033 Timm13 protein_coding protein_coding MGP_CBAJ_T0099841.1 MGP_CBAJ_G0038096.1 mouse_genomes_project 10 23355022 23355096 - Snord100 snoRNA snoRNA MGP_CBAJ_T0025758.1 MGP_CBAJ_G0017197.1 mouse_genomes_project 10 86367226 86379822 + MGP_CBAJ_P0025758 Misp protein_coding protein_coding MGP_CBAJ_T0025759.1 MGP_CBAJ_G0017197.1 mouse_genomes_project 10 86368832 86379822 + MGP_CBAJ_P0025759 Misp protein_coding protein_coding MGP_CBAJ_T0025880.1 MGP_CBAJ_G0017221.1 mouse_genomes_project 10 86773093 86780940 + MGP_CBAJ_P0025880 Cirbp protein_coding protein_coding MGP_CBAJ_T0025881.1 MGP_CBAJ_G0017221.1 mouse_genomes_project 10 86774874 86782279 + MGP_CBAJ_P0025881 Cirbp protein_coding protein_coding MGP_CBAJ_T0025882.1 MGP_CBAJ_G0017221.1 mouse_genomes_project 10 86774936 86783448 + MGP_CBAJ_P0025882 Cirbp protein_coding protein_coding MGP_CBAJ_T0025883.1 MGP_CBAJ_G0017221.1 mouse_genomes_project 10 86774959 86780753 + Cirbp protein_coding retained_intron MGP_CBAJ_T0025884.1 MGP_CBAJ_G0017221.1 mouse_genomes_project 10 86774982 86781761 + Cirbp protein_coding retained_intron MGP_CBAJ_T0025885.1 MGP_CBAJ_G0017221.1 mouse_genomes_project 10 86780850 86781828 + Cirbp protein_coding retained_intron MGP_CBAJ_T0025886.1 MGP_CBAJ_G0017221.1 mouse_genomes_project 10 86782605 86783322 + Cirbp protein_coding retained_intron MGP_CBAJ_T0025714.1 MGP_CBAJ_G0017181.1 mouse_genomes_project 10 86101300 86115674 - MGP_CBAJ_P0025714 Theg protein_coding protein_coding MGP_CBAJ_T0025715.1 MGP_CBAJ_G0017181.1 mouse_genomes_project 10 86101398 86105073 - Theg protein_coding retained_intron MGP_CBAJ_T0025716.1 MGP_CBAJ_G0017181.1 mouse_genomes_project 10 86101398 86115869 - MGP_CBAJ_P0025716 Theg protein_coding protein_coding MGP_CBAJ_T0000794.1 MGP_CBAJ_G0000730.1 mouse_genomes_project 10 117837985 117838924 - TEC TEC MGP_CBAJ_T0003038.1 MGP_CBAJ_G0002829.1 mouse_genomes_project 10 142317750 142321123 + Gm29585 antisense antisense MGP_CBAJ_T0003039.1 MGP_CBAJ_G0002829.1 mouse_genomes_project 10 142320057 142321144 + Gm29585 antisense antisense MGP_CBAJ_T0003040.1 MGP_CBAJ_G0002829.1 mouse_genomes_project 10 142320814 142340883 + Gm29585 antisense antisense MGP_CBAJ_T0024887.1 MGP_CBAJ_G0016964.1 mouse_genomes_project 10 56794248 56910226 - MGP_CBAJ_P0024887 Fam184a protein_coding protein_coding MGP_CBAJ_T0024888.1 MGP_CBAJ_G0016964.1 mouse_genomes_project 10 56794469 56849756 - MGP_CBAJ_P0024888 Fam184a protein_coding protein_coding MGP_CBAJ_T0024889.1 MGP_CBAJ_G0016964.1 mouse_genomes_project 10 56794472 56816143 - MGP_CBAJ_P0024889 Fam184a protein_coding nonsense_mediated_decay MGP_CBAJ_T0024890.1 MGP_CBAJ_G0016964.1 mouse_genomes_project 10 56794473 56854276 - MGP_CBAJ_P0024890 Fam184a protein_coding protein_coding MGP_CBAJ_T0024891.1 MGP_CBAJ_G0016964.1 mouse_genomes_project 10 56794733 56808306 - MGP_CBAJ_P0024891 Fam184a protein_coding protein_coding MGP_CBAJ_T0024892.1 MGP_CBAJ_G0016964.1 mouse_genomes_project 10 56794737 56799373 - MGP_CBAJ_P0024892 Fam184a protein_coding protein_coding MGP_CBAJ_T0024893.1 MGP_CBAJ_G0016964.1 mouse_genomes_project 10 56794737 56910118 - MGP_CBAJ_P0024893 Fam184a protein_coding unknown_likely_coding MGP_CBAJ_T0024894.1 MGP_CBAJ_G0016964.1 mouse_genomes_project 10 56799283 56834078 - Fam184a protein_coding processed_transcript MGP_CBAJ_T0024895.1 MGP_CBAJ_G0016964.1 mouse_genomes_project 10 56851929 56910255 - Fam184a protein_coding retained_intron MGP_CBAJ_T0025092.1 MGP_CBAJ_G0017024.1 mouse_genomes_project 10 66098532 66101928 - MGP_CBAJ_P0025092 2010107G23Rik protein_coding protein_coding MGP_CBAJ_T0025093.1 MGP_CBAJ_G0017024.1 mouse_genomes_project 10 66099087 66101823 - MGP_CBAJ_P0025093 2010107G23Rik protein_coding protein_coding MGP_CBAJ_T0025094.1 MGP_CBAJ_G0017024.1 mouse_genomes_project 10 66099087 66101846 - MGP_CBAJ_P0025094 2010107G23Rik protein_coding protein_coding MGP_CBAJ_T0025095.1 MGP_CBAJ_G0017024.1 mouse_genomes_project 10 66099087 66101928 - MGP_CBAJ_P0025095 2010107G23Rik protein_coding protein_coding MGP_CBAJ_T0025096.1 MGP_CBAJ_G0017024.1 mouse_genomes_project 10 66099089 66101891 - MGP_CBAJ_P0025096 2010107G23Rik protein_coding protein_coding MGP_CBAJ_T0025097.1 MGP_CBAJ_G0017024.1 mouse_genomes_project 10 66099712 66137796 - MGP_CBAJ_P0025097 2010107G23Rik protein_coding protein_coding MGP_CBAJ_T0025098.1 MGP_CBAJ_G0017024.1 mouse_genomes_project 10 66099794 66128471 - MGP_CBAJ_P0025098 2010107G23Rik protein_coding protein_coding MGP_CBAJ_T0025099.1 MGP_CBAJ_G0017024.1 mouse_genomes_project 10 66099795 66140763 - MGP_CBAJ_P0025099 2010107G23Rik protein_coding protein_coding MGP_CBAJ_T0025100.1 MGP_CBAJ_G0017024.1 mouse_genomes_project 10 66099797 66101374 - MGP_CBAJ_P0025100 2010107G23Rik protein_coding protein_coding MGP_CBAJ_T0025101.1 MGP_CBAJ_G0017024.1 mouse_genomes_project 10 66100824 66140767 - MGP_CBAJ_P0025101 2010107G23Rik protein_coding protein_coding MGP_CBAJ_T0025103.1 MGP_CBAJ_G0017024.1 mouse_genomes_project 10 66128285 66140777 - 2010107G23Rik protein_coding processed_transcript MGP_CBAJ_T0025910.1 MGP_CBAJ_G0017227.1 mouse_genomes_project 10 86888444 86907830 + MGP_CBAJ_P0025910 Dazap1 protein_coding protein_coding MGP_CBAJ_T0025911.1 MGP_CBAJ_G0017227.1 mouse_genomes_project 10 86891911 86915254 + MGP_CBAJ_P0025911 Dazap1 protein_coding protein_coding MGP_CBAJ_T0025912.1 MGP_CBAJ_G0017227.1 mouse_genomes_project 10 86891943 86914739 + MGP_CBAJ_P0025912 Dazap1 protein_coding protein_coding MGP_CBAJ_T0025913.1 MGP_CBAJ_G0017227.1 mouse_genomes_project 10 86892001 86915254 + MGP_CBAJ_P0025913 Dazap1 protein_coding protein_coding MGP_CBAJ_T0025914.1 MGP_CBAJ_G0017227.1 mouse_genomes_project 10 86892051 86905201 + Dazap1 protein_coding processed_transcript MGP_CBAJ_T0025915.1 MGP_CBAJ_G0017227.1 mouse_genomes_project 10 86907247 86912260 + Dazap1 protein_coding retained_intron MGP_CBAJ_T0025916.1 MGP_CBAJ_G0017227.1 mouse_genomes_project 10 86909691 86911346 + Dazap1 protein_coding retained_intron MGP_CBAJ_T0024693.1 MGP_CBAJ_G0016896.1 mouse_genomes_project 10 41879058 41895145 - MGP_CBAJ_P0024693 Amd1 protein_coding unknown_likely_coding MGP_CBAJ_T0009526.1 MGP_CBAJ_G0007664.1 mouse_genomes_project 10 142225736 142225825 + Mir8105 miRNA miRNA MGP_CBAJ_T0026752.1 MGP_CBAJ_G0017452.1 mouse_genomes_project 10 121782481 121804461 + MGP_CBAJ_P0026752 Csrp2 protein_coding protein_coding MGP_CBAJ_T0003002.1 MGP_CBAJ_G0002803.1 mouse_genomes_project 10 93723318 93746451 + 4930486F22Rik antisense antisense MGP_CBAJ_T0027322.1 MGP_CBAJ_G0017675.1 mouse_genomes_project 10 144371227 144372285 - MGP_CBAJ_P0027322 Olfr827 protein_coding protein_coding MGP_CBAJ_T0025509.1 MGP_CBAJ_G0017113.1 mouse_genomes_project 10 82290879 82296951 - MGP_CBAJ_P0025509 Dip2a protein_coding nonsense_mediated_decay MGP_CBAJ_T0025510.1 MGP_CBAJ_G0017113.1 mouse_genomes_project 10 82294178 82387798 - MGP_CBAJ_P0025510 Dip2a protein_coding protein_coding MGP_CBAJ_T0025511.1 MGP_CBAJ_G0017113.1 mouse_genomes_project 10 82294476 82320093 - Dip2a protein_coding retained_intron MGP_CBAJ_T0025512.1 MGP_CBAJ_G0017113.1 mouse_genomes_project 10 82294493 82387798 - MGP_CBAJ_P0025512 Dip2a protein_coding protein_coding MGP_CBAJ_T0025513.1 MGP_CBAJ_G0017113.1 mouse_genomes_project 10 82294493 82387767 - MGP_CBAJ_P0025513 Dip2a protein_coding protein_coding MGP_CBAJ_T0025514.1 MGP_CBAJ_G0017113.1 mouse_genomes_project 10 82296114 82302014 - Dip2a protein_coding retained_intron MGP_CBAJ_T0025515.1 MGP_CBAJ_G0017113.1 mouse_genomes_project 10 82316842 82326695 - MGP_CBAJ_P0025515 Dip2a protein_coding nonsense_mediated_decay MGP_CBAJ_T0025516.1 MGP_CBAJ_G0017113.1 mouse_genomes_project 10 82329512 82387739 - Dip2a protein_coding retained_intron MGP_CBAJ_T0026316.1 MGP_CBAJ_G0017328.1 mouse_genomes_project 10 92105350 92225469 + MGP_CBAJ_P0026316 Polr3b protein_coding protein_coding MGP_CBAJ_T0009454.1 MGP_CBAJ_G0007592.1 mouse_genomes_project 10 22215640 22215701 - Mir7663 miRNA miRNA MGP_CBAJ_T0025061.1 MGP_CBAJ_G0017010.1 mouse_genomes_project 10 65128035 65141787 + MGP_CBAJ_P0025061 Prf1 protein_coding protein_coding MGP_CBAJ_T0025752.1 MGP_CBAJ_G0017195.1 mouse_genomes_project 10 86325294 86332795 - MGP_CBAJ_P0025752 Prss57 protein_coding protein_coding MGP_CBAJ_T0025753.1 MGP_CBAJ_G0017195.1 mouse_genomes_project 10 86325296 86334771 - MGP_CBAJ_P0025753 Prss57 protein_coding protein_coding MGP_CBAJ_T0025754.1 MGP_CBAJ_G0017195.1 mouse_genomes_project 10 86326738 86328376 - MGP_CBAJ_P0025754 Prss57 protein_coding protein_coding MGP_CBAJ_T0025755.1 MGP_CBAJ_G0017195.1 mouse_genomes_project 10 86326916 86328394 - MGP_CBAJ_P0025755 Prss57 protein_coding protein_coding MGP_CBAJ_T0024642.1 MGP_CBAJ_G0016882.1 mouse_genomes_project 10 40568095 40583401 - MGP_CBAJ_P0024642 Fam229b protein_coding protein_coding MGP_CBAJ_T0024643.1 MGP_CBAJ_G0016882.1 mouse_genomes_project 10 40568099 40583395 - MGP_CBAJ_P0024643 Fam229b protein_coding protein_coding MGP_CBAJ_T0024644.1 MGP_CBAJ_G0016882.1 mouse_genomes_project 10 40568101 40572384 - MGP_CBAJ_P0024644 Fam229b protein_coding protein_coding MGP_CBAJ_T0024645.1 MGP_CBAJ_G0016882.1 mouse_genomes_project 10 40568101 40583343 - MGP_CBAJ_P0024645 Fam229b protein_coding protein_coding MGP_CBAJ_T0024646.1 MGP_CBAJ_G0016882.1 mouse_genomes_project 10 40568109 40583395 - MGP_CBAJ_P0024646 Fam229b protein_coding protein_coding MGP_CBAJ_T0024647.1 MGP_CBAJ_G0016882.1 mouse_genomes_project 10 40568110 40583395 - MGP_CBAJ_P0024647 Fam229b protein_coding protein_coding MGP_CBAJ_T0024648.1 MGP_CBAJ_G0016882.1 mouse_genomes_project 10 40568111 40571596 - MGP_CBAJ_P0024648 Fam229b protein_coding protein_coding MGP_CBAJ_T0024649.1 MGP_CBAJ_G0016882.1 mouse_genomes_project 10 40568115 40583409 - MGP_CBAJ_P0024649 Fam229b protein_coding protein_coding MGP_CBAJ_T0024650.1 MGP_CBAJ_G0016882.1 mouse_genomes_project 10 40568159 40583395 - MGP_CBAJ_P0024650 Fam229b protein_coding protein_coding MGP_CBAJ_T0024651.1 MGP_CBAJ_G0016882.1 mouse_genomes_project 10 40568910 40583352 - Fam229b protein_coding retained_intron MGP_CBAJ_T0026124.1 MGP_CBAJ_G0017288.1 mouse_genomes_project 10 88191420 88195853 - MGP_CBAJ_P0026124 Hmg20b protein_coding protein_coding MGP_CBAJ_T0026125.1 MGP_CBAJ_G0017288.1 mouse_genomes_project 10 88191423 88195742 - Hmg20b protein_coding retained_intron MGP_CBAJ_T0026126.1 MGP_CBAJ_G0017288.1 mouse_genomes_project 10 88191423 88195799 - MGP_CBAJ_P0026126 Hmg20b protein_coding protein_coding MGP_CBAJ_T0026127.1 MGP_CBAJ_G0017288.1 mouse_genomes_project 10 88191423 88195797 - MGP_CBAJ_P0026127 Hmg20b protein_coding protein_coding MGP_CBAJ_T0026128.1 MGP_CBAJ_G0017288.1 mouse_genomes_project 10 88191423 88195564 - MGP_CBAJ_P0026128 Hmg20b protein_coding protein_coding MGP_CBAJ_T0026129.1 MGP_CBAJ_G0017288.1 mouse_genomes_project 10 88191424 88192103 - Hmg20b protein_coding retained_intron MGP_CBAJ_T0026130.1 MGP_CBAJ_G0017288.1 mouse_genomes_project 10 88191424 88195700 - MGP_CBAJ_P0026130 Hmg20b protein_coding protein_coding MGP_CBAJ_T0026131.1 MGP_CBAJ_G0017288.1 mouse_genomes_project 10 88192131 88194458 - MGP_CBAJ_P0026131 Hmg20b protein_coding protein_coding MGP_CBAJ_T0026132.1 MGP_CBAJ_G0017288.1 mouse_genomes_project 10 88192369 88195816 - MGP_CBAJ_P0026132 Hmg20b protein_coding protein_coding MGP_CBAJ_T0026133.1 MGP_CBAJ_G0017288.1 mouse_genomes_project 10 88192370 88193295 - Hmg20b protein_coding retained_intron MGP_CBAJ_T0026134.1 MGP_CBAJ_G0017288.1 mouse_genomes_project 10 88194376 88195692 - Hmg20b protein_coding processed_transcript MGP_CBAJ_T0026135.1 MGP_CBAJ_G0017288.1 mouse_genomes_project 10 88194418 88195690 - Hmg20b protein_coding retained_intron MGP_CBAJ_T0026136.1 MGP_CBAJ_G0017288.1 mouse_genomes_project 10 88194428 88195817 - Hmg20b protein_coding processed_transcript MGP_CBAJ_T0024884.1 MGP_CBAJ_G0016962.1 mouse_genomes_project 10 56701896 56791537 - MGP_CBAJ_P0024884 Mcm9 protein_coding protein_coding MGP_CBAJ_T0024885.1 MGP_CBAJ_G0016962.1 mouse_genomes_project 10 56702891 56757514 - MGP_CBAJ_P0024885 Mcm9 protein_coding unknown_likely_coding MGP_CBAJ_T0012275.1 MGP_CBAJ_G0010387.1 mouse_genomes_project 10 72088465 72106103 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0027187.1 MGP_CBAJ_G0017597.1 mouse_genomes_project 10 142169409 142204225 + MGP_CBAJ_P0027187 Rnf41 protein_coding protein_coding MGP_CBAJ_T0027188.1 MGP_CBAJ_G0017597.1 mouse_genomes_project 10 142169409 142204225 + MGP_CBAJ_P0027188 Rnf41 protein_coding protein_coding MGP_CBAJ_T0025815.1 MGP_CBAJ_G0017210.1 mouse_genomes_project 10 86555707 86559533 - Tmem259 protein_coding retained_intron MGP_CBAJ_T0025816.1 MGP_CBAJ_G0017210.1 mouse_genomes_project 10 86556649 86559700 - Tmem259 protein_coding retained_intron MGP_CBAJ_T0025817.1 MGP_CBAJ_G0017210.1 mouse_genomes_project 10 86557877 86568154 - MGP_CBAJ_P0025817 Tmem259 protein_coding protein_coding MGP_CBAJ_T0025818.1 MGP_CBAJ_G0017210.1 mouse_genomes_project 10 86558117 86564781 - MGP_CBAJ_P0025818 Tmem259 protein_coding protein_coding MGP_CBAJ_T0025819.1 MGP_CBAJ_G0017210.1 mouse_genomes_project 10 86558722 86559536 - Tmem259 protein_coding retained_intron MGP_CBAJ_T0002963.1 MGP_CBAJ_G0002772.1 mouse_genomes_project 10 63278571 63279549 - Gm17059 antisense antisense MGP_CBAJ_T0024467.1 MGP_CBAJ_G0016806.1 mouse_genomes_project 10 23365954 23397014 + MGP_CBAJ_P0024467 Slc18b1 protein_coding protein_coding MGP_CBAJ_T0024468.1 MGP_CBAJ_G0016806.1 mouse_genomes_project 10 23365954 23397014 + MGP_CBAJ_P0024468 Slc18b1 protein_coding protein_coding MGP_CBAJ_T0024469.1 MGP_CBAJ_G0016806.1 mouse_genomes_project 10 23366020 23374837 + MGP_CBAJ_P0024469 Slc18b1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024470.1 MGP_CBAJ_G0016806.1 mouse_genomes_project 10 23366168 23374789 + MGP_CBAJ_P0024470 Slc18b1 protein_coding protein_coding MGP_CBAJ_T0024471.1 MGP_CBAJ_G0016806.1 mouse_genomes_project 10 23374853 23387245 + MGP_CBAJ_P0024471 Slc18b1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024472.1 MGP_CBAJ_G0016806.1 mouse_genomes_project 10 23393455 23396048 + Slc18b1 protein_coding retained_intron MGP_CBAJ_T0024677.1 MGP_CBAJ_G0016890.1 mouse_genomes_project 10 41490805 41505788 - MGP_CBAJ_P0024677 Mfsd4b3 protein_coding protein_coding MGP_CBAJ_T0027220.1 MGP_CBAJ_G0017608.1 mouse_genomes_project 10 142489649 142493681 - MGP_CBAJ_P0027220 Suox protein_coding protein_coding MGP_CBAJ_T0026356.1 MGP_CBAJ_G0017343.1 mouse_genomes_project 10 93674688 94134851 - MGP_CBAJ_P0026356 Syn3 protein_coding protein_coding MGP_CBAJ_T0026357.1 MGP_CBAJ_G0017343.1 mouse_genomes_project 10 93676986 93686403 - Syn3 protein_coding processed_transcript MGP_CBAJ_T0026358.1 MGP_CBAJ_G0017343.1 mouse_genomes_project 10 93690303 94127960 - Syn3 protein_coding retained_intron MGP_CBAJ_T0026359.1 MGP_CBAJ_G0017343.1 mouse_genomes_project 10 93926043 94134877 - MGP_CBAJ_P0026359 Syn3 protein_coding protein_coding MGP_CBAJ_T0026364.1 MGP_CBAJ_G0017343.1 mouse_genomes_project 10 93983100 94127960 - Syn3 protein_coding retained_intron MGP_CBAJ_T0026365.1 MGP_CBAJ_G0017343.1 mouse_genomes_project 10 93986473 94134891 - Syn3 protein_coding retained_intron MGP_CBAJ_T0026966.1 MGP_CBAJ_G0017528.1 mouse_genomes_project 10 140258600 140293782 - MGP_CBAJ_P0026966 Xrcc6bp1 protein_coding protein_coding MGP_CBAJ_T0026967.1 MGP_CBAJ_G0017528.1 mouse_genomes_project 10 140278822 140293782 - MGP_CBAJ_P0026967 Xrcc6bp1 protein_coding protein_coding MGP_CBAJ_T0009519.1 MGP_CBAJ_G0007657.1 mouse_genomes_project 10 140406210 140406294 + Mir26a-2 miRNA miRNA MGP_CBAJ_T0024567.1 MGP_CBAJ_G0016847.1 mouse_genomes_project 10 29703570 29721834 - MGP_CBAJ_P0024567 Rnf146 protein_coding protein_coding MGP_CBAJ_T0024568.1 MGP_CBAJ_G0016847.1 mouse_genomes_project 10 29705563 29721834 - MGP_CBAJ_P0024568 Rnf146 protein_coding protein_coding MGP_CBAJ_T0024569.1 MGP_CBAJ_G0016847.1 mouse_genomes_project 10 29705568 29721432 - MGP_CBAJ_P0024569 Rnf146 protein_coding protein_coding MGP_CBAJ_T0024570.1 MGP_CBAJ_G0016847.1 mouse_genomes_project 10 29706050 29717106 - MGP_CBAJ_P0024570 Rnf146 protein_coding protein_coding MGP_CBAJ_T0024571.1 MGP_CBAJ_G0016847.1 mouse_genomes_project 10 29706611 29721415 - MGP_CBAJ_P0024571 Rnf146 protein_coding protein_coding MGP_CBAJ_T0025723.1 MGP_CBAJ_G0017185.1 mouse_genomes_project 10 86200693 86204656 + MGP_CBAJ_P0025723 Madcam1 protein_coding protein_coding MGP_CBAJ_T0099864.1 MGP_CBAJ_G0038119.1 mouse_genomes_project 10 74213455 74213572 + Gm24172 snoRNA snoRNA MGP_CBAJ_T0025727.1 MGP_CBAJ_G0017188.1 mouse_genomes_project 10 86224972 86231213 + MGP_CBAJ_P0025727 Gzmm protein_coding protein_coding MGP_CBAJ_T0025728.1 MGP_CBAJ_G0017188.1 mouse_genomes_project 10 86229709 86231212 + Gzmm protein_coding processed_transcript MGP_CBAJ_T0009502.1 MGP_CBAJ_G0007640.1 mouse_genomes_project 10 104482066 104482157 - Mir3058 miRNA miRNA MGP_CBAJ_T0098255.1 MGP_CBAJ_G0036527.1 mouse_genomes_project 10 103169235 103171077 + Gm16155 sense_intronic sense_intronic MGP_CBAJ_T0099868.1 MGP_CBAJ_G0038123.1 mouse_genomes_project 10 84169731 84169785 - Gm22871 snoRNA snoRNA MGP_CBAJ_T0006068.1 MGP_CBAJ_G0005060.1 mouse_genomes_project 10 128455639 128460240 + Gm26579 lincRNA lincRNA MGP_CBAJ_T0027115.1 MGP_CBAJ_G0017576.1 mouse_genomes_project 10 141680176 141696289 + MGP_CBAJ_P0027115 Prim1 protein_coding protein_coding MGP_CBAJ_T0027116.1 MGP_CBAJ_G0017576.1 mouse_genomes_project 10 141680180 141696343 + MGP_CBAJ_P0027116 Prim1 protein_coding protein_coding MGP_CBAJ_T0027117.1 MGP_CBAJ_G0017576.1 mouse_genomes_project 10 141680204 141696171 + Prim1 protein_coding retained_intron MGP_CBAJ_T0027118.1 MGP_CBAJ_G0017576.1 mouse_genomes_project 10 141684746 141686907 + Prim1 protein_coding retained_intron MGP_CBAJ_T0027119.1 MGP_CBAJ_G0017576.1 mouse_genomes_project 10 141692992 141696339 + Prim1 protein_coding retained_intron MGP_CBAJ_T0027067.1 MGP_CBAJ_G0017557.1 mouse_genomes_project 10 141047058 141052405 - MGP_CBAJ_P0027067 Shmt2 protein_coding protein_coding MGP_CBAJ_T0027194.1 MGP_CBAJ_G0017601.1 mouse_genomes_project 10 142302881 142321346 - MGP_CBAJ_P0027194 Esyt1 protein_coding protein_coding MGP_CBAJ_T0027038.1 MGP_CBAJ_G0017551.1 mouse_genomes_project 10 140813704 140827804 - MGP_CBAJ_P0027038 Gli1 protein_coding protein_coding MGP_CBAJ_T0099854.1 MGP_CBAJ_G0038109.1 mouse_genomes_project 10 47541364 47541493 - Gm26016 snoRNA snoRNA MGP_CBAJ_T0026044.1 MGP_CBAJ_G0017266.1 mouse_genomes_project 10 87797643 87803478 - MGP_CBAJ_P0026044 Diras1 protein_coding protein_coding MGP_CBAJ_T0026045.1 MGP_CBAJ_G0017266.1 mouse_genomes_project 10 87800145 87803731 - MGP_CBAJ_P0026045 Diras1 protein_coding protein_coding MGP_CBAJ_T0026463.1 MGP_CBAJ_G0017369.1 mouse_genomes_project 10 97474950 97511925 - MGP_CBAJ_P0026463 Gas2l3 protein_coding protein_coding MGP_CBAJ_T0026464.1 MGP_CBAJ_G0017369.1 mouse_genomes_project 10 97474950 97511925 - MGP_CBAJ_P0026464 Gas2l3 protein_coding protein_coding MGP_CBAJ_T0025725.1 MGP_CBAJ_G0017187.1 mouse_genomes_project 10 86218147 86224347 + MGP_CBAJ_P0025725 Cdc34 protein_coding protein_coding MGP_CBAJ_T0025726.1 MGP_CBAJ_G0017187.1 mouse_genomes_project 10 86218256 86224347 + MGP_CBAJ_P0025726 Cdc34 protein_coding protein_coding MGP_CBAJ_T0005990.1 MGP_CBAJ_G0005008.1 mouse_genomes_project 10 20628290 20635537 + 1700021A07Rik lincRNA lincRNA MGP_CBAJ_T0005991.1 MGP_CBAJ_G0005008.1 mouse_genomes_project 10 20628409 20634718 + 1700021A07Rik lincRNA lincRNA MGP_CBAJ_T0005992.1 MGP_CBAJ_G0005008.1 mouse_genomes_project 10 20634313 20634622 + 1700021A07Rik lincRNA lincRNA MGP_CBAJ_T0026341.1 MGP_CBAJ_G0017338.1 mouse_genomes_project 10 93482338 93506335 - MGP_CBAJ_P0026341 Prdm4 protein_coding unknown_likely_coding MGP_CBAJ_T0026342.1 MGP_CBAJ_G0017338.1 mouse_genomes_project 10 93482338 93506365 - MGP_CBAJ_P0026342 Prdm4 protein_coding unknown_likely_coding MGP_CBAJ_T0026343.1 MGP_CBAJ_G0017338.1 mouse_genomes_project 10 93482347 93510347 - MGP_CBAJ_P0026343 Prdm4 protein_coding protein_coding MGP_CBAJ_T0025157.1 MGP_CBAJ_G0017039.1 mouse_genomes_project 10 66950496 67041862 - MGP_CBAJ_P0025157 Tet1 protein_coding protein_coding MGP_CBAJ_T0025158.1 MGP_CBAJ_G0017039.1 mouse_genomes_project 10 66950503 67067724 - MGP_CBAJ_P0025158 Tet1 protein_coding protein_coding MGP_CBAJ_T0025159.1 MGP_CBAJ_G0017039.1 mouse_genomes_project 10 66958548 66960467 - MGP_CBAJ_P0025159 Tet1 protein_coding protein_coding MGP_CBAJ_T0025160.1 MGP_CBAJ_G0017039.1 mouse_genomes_project 10 66959052 66960468 - MGP_CBAJ_P0025160 Tet1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025161.1 MGP_CBAJ_G0017039.1 mouse_genomes_project 10 66959274 66960466 - MGP_CBAJ_P0025161 Tet1 protein_coding protein_coding MGP_CBAJ_T0025162.1 MGP_CBAJ_G0017039.1 mouse_genomes_project 10 66987260 67027192 - Tet1 protein_coding processed_transcript MGP_CBAJ_T0099856.1 MGP_CBAJ_G0038111.1 mouse_genomes_project 10 51069833 51069962 + Gm23584 snoRNA snoRNA MGP_CBAJ_T0012296.1 MGP_CBAJ_G0010408.1 mouse_genomes_project 10 129575094 129579661 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0026259.1 MGP_CBAJ_G0017313.1 mouse_genomes_project 10 89873106 89920883 - MGP_CBAJ_P0026259 Glt8d2 protein_coding protein_coding MGP_CBAJ_T0026260.1 MGP_CBAJ_G0017313.1 mouse_genomes_project 10 89873979 89876141 - Glt8d2 protein_coding retained_intron MGP_CBAJ_T0026261.1 MGP_CBAJ_G0017313.1 mouse_genomes_project 10 89874232 89882197 - MGP_CBAJ_P0026261 Glt8d2 protein_coding protein_coding MGP_CBAJ_T0026262.1 MGP_CBAJ_G0017313.1 mouse_genomes_project 10 89875469 89920850 - MGP_CBAJ_P0026262 Glt8d2 protein_coding protein_coding MGP_CBAJ_T0026263.1 MGP_CBAJ_G0017313.1 mouse_genomes_project 10 89877721 89920850 - MGP_CBAJ_P0026263 Glt8d2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026264.1 MGP_CBAJ_G0017313.1 mouse_genomes_project 10 89887246 89893075 - MGP_CBAJ_P0026264 Glt8d2 protein_coding protein_coding MGP_CBAJ_T0026265.1 MGP_CBAJ_G0017313.1 mouse_genomes_project 10 89891861 89920862 - Glt8d2 protein_coding retained_intron MGP_CBAJ_T0025830.1 MGP_CBAJ_G0017214.1 mouse_genomes_project 10 86623398 86624635 - Polr2e protein_coding retained_intron MGP_CBAJ_T0025831.1 MGP_CBAJ_G0017214.1 mouse_genomes_project 10 86623398 86627160 - Polr2e protein_coding retained_intron MGP_CBAJ_T0025832.1 MGP_CBAJ_G0017214.1 mouse_genomes_project 10 86623398 86627245 - MGP_CBAJ_P0025832 Polr2e protein_coding protein_coding MGP_CBAJ_T0025833.1 MGP_CBAJ_G0017214.1 mouse_genomes_project 10 86623400 86627100 - Polr2e protein_coding retained_intron MGP_CBAJ_T0025834.1 MGP_CBAJ_G0017214.1 mouse_genomes_project 10 86623624 86627151 - Polr2e protein_coding retained_intron MGP_CBAJ_T0006022.1 MGP_CBAJ_G0005033.1 mouse_genomes_project 10 78807006 78947735 - Gm15398 lincRNA lincRNA MGP_CBAJ_T0026730.1 MGP_CBAJ_G0017448.1 mouse_genomes_project 10 118866387 118954299 + MGP_CBAJ_P0026730 Pawr protein_coding protein_coding MGP_CBAJ_T0026285.1 MGP_CBAJ_G0017320.1 mouse_genomes_project 10 90674949 90683558 + MGP_CBAJ_P0026285 D10Wsu102e protein_coding protein_coding MGP_CBAJ_T0027007.1 MGP_CBAJ_G0017541.1 mouse_genomes_project 10 140629834 140637697 - MGP_CBAJ_P0027007 Slc26a10 protein_coding unknown_likely_coding MGP_CBAJ_T0027008.1 MGP_CBAJ_G0017541.1 mouse_genomes_project 10 140629835 140638051 - MGP_CBAJ_P0027008 Slc26a10 protein_coding protein_coding MGP_CBAJ_T0002948.1 MGP_CBAJ_G0002761.1 mouse_genomes_project 10 27575992 27583363 + 4930579H20Rik antisense antisense MGP_CBAJ_T0025873.1 MGP_CBAJ_G0017220.1 mouse_genomes_project 10 86755386 86765512 + MGP_CBAJ_P0025873 Midn protein_coding protein_coding MGP_CBAJ_T0025874.1 MGP_CBAJ_G0017220.1 mouse_genomes_project 10 86755386 86765513 + MGP_CBAJ_P0025874 Midn protein_coding protein_coding MGP_CBAJ_T0025875.1 MGP_CBAJ_G0017220.1 mouse_genomes_project 10 86756238 86757405 + MGP_CBAJ_P0025875 Midn protein_coding protein_coding MGP_CBAJ_T0025876.1 MGP_CBAJ_G0017220.1 mouse_genomes_project 10 86757012 86760809 + Midn protein_coding processed_transcript MGP_CBAJ_T0025877.1 MGP_CBAJ_G0017220.1 mouse_genomes_project 10 86757582 86760990 + MGP_CBAJ_P0025877 Midn protein_coding protein_coding MGP_CBAJ_T0025878.1 MGP_CBAJ_G0017220.1 mouse_genomes_project 10 86758279 86761594 + MGP_CBAJ_P0025878 Midn protein_coding protein_coding MGP_CBAJ_T0025879.1 MGP_CBAJ_G0017220.1 mouse_genomes_project 10 86758363 86760818 + MGP_CBAJ_P0025879 Midn protein_coding protein_coding MGP_CBAJ_T0024959.1 MGP_CBAJ_G0016989.1 mouse_genomes_project 10 62849959 62870153 + MGP_CBAJ_P0024959 Pla2g12b protein_coding protein_coding MGP_CBAJ_T0024960.1 MGP_CBAJ_G0016989.1 mouse_genomes_project 10 62857340 62870147 + MGP_CBAJ_P0024960 Pla2g12b protein_coding protein_coding MGP_CBAJ_T0025565.1 MGP_CBAJ_G0017127.1 mouse_genomes_project 10 83415183 83416631 - MGP_CBAJ_P0025565 Gm10941 protein_coding protein_coding MGP_CBAJ_T0098614.1 MGP_CBAJ_G0036869.1 mouse_genomes_project 10 31717041 31717148 - Gm23790 snRNA snRNA MGP_CBAJ_T0003013.1 MGP_CBAJ_G0002812.1 mouse_genomes_project 10 108571210 108576518 - Gm16239 antisense antisense MGP_CBAJ_T0026646.1 MGP_CBAJ_G0017415.1 mouse_genomes_project 10 106910563 106912431 + MGP_CBAJ_P0026646 Ccer1 protein_coding protein_coding MGP_CBAJ_T0002996.1 MGP_CBAJ_G0002799.1 mouse_genomes_project 10 88470927 88474256 - Gm15917 antisense antisense MGP_CBAJ_T0025438.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81490327 81504974 + MGP_CBAJ_P0025438 Ggt1 protein_coding protein_coding MGP_CBAJ_T0025439.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81490378 81505021 + MGP_CBAJ_P0025439 Ggt1 protein_coding protein_coding MGP_CBAJ_T0025440.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81492871 81503046 + MGP_CBAJ_P0025440 Ggt1 protein_coding protein_coding MGP_CBAJ_T0025441.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81492878 81504974 + MGP_CBAJ_P0025441 Ggt1 protein_coding protein_coding MGP_CBAJ_T0025442.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81495014 81507636 + MGP_CBAJ_P0025442 Ggt1 protein_coding protein_coding MGP_CBAJ_T0025443.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81495019 81508084 + MGP_CBAJ_P0025443 Ggt1 protein_coding protein_coding MGP_CBAJ_T0025444.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81497355 81508001 + MGP_CBAJ_P0025444 Ggt1 protein_coding protein_coding MGP_CBAJ_T0025445.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81497362 81505021 + MGP_CBAJ_P0025445 Ggt1 protein_coding protein_coding MGP_CBAJ_T0025446.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81497377 81514948 + MGP_CBAJ_P0025446 Ggt1 protein_coding protein_coding MGP_CBAJ_T0025447.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81497378 81504773 + MGP_CBAJ_P0025447 Ggt1 protein_coding protein_coding MGP_CBAJ_T0025448.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81497383 81505021 + MGP_CBAJ_P0025448 Ggt1 protein_coding protein_coding MGP_CBAJ_T0025449.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81497395 81504688 + MGP_CBAJ_P0025449 Ggt1 protein_coding protein_coding MGP_CBAJ_T0025450.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81500245 81507639 + MGP_CBAJ_P0025450 Ggt1 protein_coding protein_coding MGP_CBAJ_T0025451.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81500250 81508079 + MGP_CBAJ_P0025451 Ggt1 protein_coding protein_coding MGP_CBAJ_T0025452.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81500289 81510152 + Ggt1 protein_coding processed_transcript MGP_CBAJ_T0025453.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81502167 81514930 + MGP_CBAJ_P0025453 Ggt1 protein_coding protein_coding MGP_CBAJ_T0025454.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81502605 81508102 + MGP_CBAJ_P0025454 Ggt1 protein_coding protein_coding MGP_CBAJ_T0025455.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81504794 81513622 + MGP_CBAJ_P0025455 Ggt1 protein_coding protein_coding MGP_CBAJ_T0025456.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81510088 81514906 + MGP_CBAJ_P0025456 Ggt1 protein_coding protein_coding MGP_CBAJ_T0025457.1 MGP_CBAJ_G0017091.1 mouse_genomes_project 10 81513852 81514939 + Ggt1 protein_coding retained_intron MGP_CBAJ_T0026005.1 MGP_CBAJ_G0017251.1 mouse_genomes_project 10 87423643 87462795 - MGP_CBAJ_P0026005 Ap3d1 protein_coding protein_coding MGP_CBAJ_T0026183.1 MGP_CBAJ_G0017298.1 mouse_genomes_project 10 88381276 88389580 - Gna15 protein_coding retained_intron MGP_CBAJ_T0026184.1 MGP_CBAJ_G0017298.1 mouse_genomes_project 10 88381283 88407296 - MGP_CBAJ_P0026184 Gna15 protein_coding protein_coding MGP_CBAJ_T0026185.1 MGP_CBAJ_G0017298.1 mouse_genomes_project 10 88382057 88394046 - Gna15 protein_coding retained_intron MGP_CBAJ_T0009528.1 MGP_CBAJ_G0007666.1 mouse_genomes_project 10 142354508 142354627 - miRNA miRNA MGP_CBAJ_T0024377.1 MGP_CBAJ_G0016778.1 mouse_genomes_project 10 18552379 18570556 + MGP_CBAJ_P0024377 Ifngr1 protein_coding protein_coding MGP_CBAJ_T0024378.1 MGP_CBAJ_G0016778.1 mouse_genomes_project 10 18552388 18558281 + Ifngr1 protein_coding retained_intron MGP_CBAJ_T0024379.1 MGP_CBAJ_G0016778.1 mouse_genomes_project 10 18552461 18564084 + MGP_CBAJ_P0024379 Ifngr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024380.1 MGP_CBAJ_G0016778.1 mouse_genomes_project 10 18552483 18561834 + MGP_CBAJ_P0024380 Ifngr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024381.1 MGP_CBAJ_G0016778.1 mouse_genomes_project 10 18552492 18564104 + MGP_CBAJ_P0024381 Ifngr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024382.1 MGP_CBAJ_G0016778.1 mouse_genomes_project 10 18566248 18569582 + Ifngr1 protein_coding retained_intron MGP_CBAJ_T0024862.1 MGP_CBAJ_G0016951.1 mouse_genomes_project 10 54769648 54770670 - MGP_CBAJ_P0024862 4933411G06Rik protein_coding protein_coding MGP_CBAJ_T0024238.1 MGP_CBAJ_G0016742.1 mouse_genomes_project 10 8375287 8388400 - MGP_CBAJ_P0024238 Rab32 protein_coding protein_coding MGP_CBAJ_T0003033.1 MGP_CBAJ_G0002824.1 mouse_genomes_project 10 134588577 134589947 + C030027H14Rik antisense antisense MGP_CBAJ_T0026643.1 MGP_CBAJ_G0017413.1 mouse_genomes_project 10 106857859 106895328 + MGP_CBAJ_P0026643 Epyc protein_coding protein_coding MGP_CBAJ_T0026644.1 MGP_CBAJ_G0017413.1 mouse_genomes_project 10 106860880 106895882 + MGP_CBAJ_P0026644 Epyc protein_coding protein_coding MGP_CBAJ_T0025734.1 MGP_CBAJ_G0017191.1 mouse_genomes_project 10 86277184 86287674 - Polrmt protein_coding retained_intron MGP_CBAJ_T0025735.1 MGP_CBAJ_G0017191.1 mouse_genomes_project 10 86277188 86280481 - MGP_CBAJ_P0025735 Polrmt protein_coding protein_coding MGP_CBAJ_T0025736.1 MGP_CBAJ_G0017191.1 mouse_genomes_project 10 86277189 86287674 - Polrmt protein_coding retained_intron MGP_CBAJ_T0025737.1 MGP_CBAJ_G0017191.1 mouse_genomes_project 10 86277190 86277890 - Polrmt protein_coding processed_transcript MGP_CBAJ_T0025738.1 MGP_CBAJ_G0017191.1 mouse_genomes_project 10 86277191 86287682 - MGP_CBAJ_P0025738 Polrmt protein_coding protein_coding MGP_CBAJ_T0025739.1 MGP_CBAJ_G0017191.1 mouse_genomes_project 10 86277191 86287680 - MGP_CBAJ_P0025739 Polrmt protein_coding protein_coding MGP_CBAJ_T0025740.1 MGP_CBAJ_G0017191.1 mouse_genomes_project 10 86277233 86277875 - Polrmt protein_coding retained_intron MGP_CBAJ_T0025741.1 MGP_CBAJ_G0017191.1 mouse_genomes_project 10 86277234 86278820 - Polrmt protein_coding retained_intron MGP_CBAJ_T0025742.1 MGP_CBAJ_G0017191.1 mouse_genomes_project 10 86277235 86287672 - MGP_CBAJ_P0025742 Polrmt protein_coding nonsense_mediated_decay MGP_CBAJ_T0025743.1 MGP_CBAJ_G0017191.1 mouse_genomes_project 10 86277268 86278793 - Polrmt protein_coding retained_intron MGP_CBAJ_T0025744.1 MGP_CBAJ_G0017191.1 mouse_genomes_project 10 86277638 86279738 - Polrmt protein_coding retained_intron MGP_CBAJ_T0025745.1 MGP_CBAJ_G0017191.1 mouse_genomes_project 10 86279194 86280482 - Polrmt protein_coding retained_intron MGP_CBAJ_T0025746.1 MGP_CBAJ_G0017191.1 mouse_genomes_project 10 86284773 86287674 - Polrmt protein_coding processed_transcript MGP_CBAJ_T0101013.1 MGP_CBAJ_G0039254.1 mouse_genomes_project 10 8432184 8442554 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101014.1 MGP_CBAJ_G0039254.1 mouse_genomes_project 10 8439291 8440288 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0024556.1 MGP_CBAJ_G0016842.1 mouse_genomes_project 10 29274819 29289988 - MGP_CBAJ_P0024556 2310057J18Rik protein_coding protein_coding MGP_CBAJ_T0024557.1 MGP_CBAJ_G0016842.1 mouse_genomes_project 10 29274895 29290897 - MGP_CBAJ_P0024557 2310057J18Rik protein_coding protein_coding MGP_CBAJ_T0024558.1 MGP_CBAJ_G0016842.1 mouse_genomes_project 10 29274897 29276721 - 2310057J18Rik protein_coding retained_intron MGP_CBAJ_T0024559.1 MGP_CBAJ_G0016842.1 mouse_genomes_project 10 29274897 29290907 - MGP_CBAJ_P0024559 2310057J18Rik protein_coding protein_coding MGP_CBAJ_T0024484.1 MGP_CBAJ_G0016818.1 mouse_genomes_project 10 23649706 23651858 + MGP_CBAJ_P0024484 protein_coding protein_coding MGP_CBAJ_T0027004.1 MGP_CBAJ_G0017539.1 mouse_genomes_project 10 140523070 140552556 - MGP_CBAJ_P0027004 Os9 protein_coding protein_coding MGP_CBAJ_T0027005.1 MGP_CBAJ_G0017539.1 mouse_genomes_project 10 140523070 140552556 - MGP_CBAJ_P0027005 Os9 protein_coding protein_coding MGP_CBAJ_T0025059.1 MGP_CBAJ_G0017009.1 mouse_genomes_project 10 64984711 65091903 - MGP_CBAJ_P0025059 Adamts14 protein_coding protein_coding MGP_CBAJ_T0025060.1 MGP_CBAJ_G0017009.1 mouse_genomes_project 10 64986069 65091707 - MGP_CBAJ_P0025060 Adamts14 protein_coding protein_coding MGP_CBAJ_T0025804.1 MGP_CBAJ_G0017205.1 mouse_genomes_project 10 86477991 86478276 + MGP_CBAJ_P0025804 Gm26602 protein_coding protein_coding MGP_CBAJ_T0024610.1 MGP_CBAJ_G0016868.1 mouse_genomes_project 10 34910169 34915699 - MGP_CBAJ_P0024610 Fam26d protein_coding protein_coding MGP_CBAJ_T0026308.1 MGP_CBAJ_G0017324.1 mouse_genomes_project 10 91093124 91139465 + MGP_CBAJ_P0026308 1500009L16Rik protein_coding protein_coding MGP_CBAJ_T0026695.1 MGP_CBAJ_G0017433.1 mouse_genomes_project 10 112259755 112298178 + MGP_CBAJ_P0026695 Rassf9 protein_coding protein_coding MGP_CBAJ_T0099889.1 MGP_CBAJ_G0038144.1 mouse_genomes_project 10 141754840 141754914 + Snord59a snoRNA snoRNA MGP_CBAJ_T0024323.1 MGP_CBAJ_G0016761.1 mouse_genomes_project 10 12924064 12984550 - MGP_CBAJ_P0024323 Vta1 protein_coding protein_coding MGP_CBAJ_T0024324.1 MGP_CBAJ_G0016761.1 mouse_genomes_project 10 12924664 12984490 - MGP_CBAJ_P0024324 Vta1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024325.1 MGP_CBAJ_G0016761.1 mouse_genomes_project 10 12924972 12943854 - Vta1 protein_coding retained_intron MGP_CBAJ_T0024326.1 MGP_CBAJ_G0016761.1 mouse_genomes_project 10 12925097 12984449 - MGP_CBAJ_P0024326 Vta1 protein_coding protein_coding MGP_CBAJ_T0024327.1 MGP_CBAJ_G0016761.1 mouse_genomes_project 10 12925148 12961293 - MGP_CBAJ_P0024327 Vta1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024328.1 MGP_CBAJ_G0016761.1 mouse_genomes_project 10 12962092 12984455 - Vta1 protein_coding processed_transcript MGP_CBAJ_T0025104.1 MGP_CBAJ_G0017026.1 mouse_genomes_project 10 66191815 66248810 - MGP_CBAJ_P0025104 Tspan15 protein_coding protein_coding MGP_CBAJ_T0025517.1 MGP_CBAJ_G0017114.1 mouse_genomes_project 10 82393760 82495458 - MGP_CBAJ_P0025517 Pcnt protein_coding protein_coding MGP_CBAJ_T0025518.1 MGP_CBAJ_G0017114.1 mouse_genomes_project 10 82393764 82495300 - MGP_CBAJ_P0025518 Pcnt protein_coding unknown_likely_coding MGP_CBAJ_T0024798.1 MGP_CBAJ_G0016924.1 mouse_genomes_project 10 45000487 45189659 - MGP_CBAJ_P0024798 Sobp protein_coding protein_coding MGP_CBAJ_T0024799.1 MGP_CBAJ_G0016924.1 mouse_genomes_project 10 45188240 45189650 - MGP_CBAJ_P0024799 Sobp protein_coding protein_coding MGP_CBAJ_T0011154.1 MGP_CBAJ_G0009292.1 mouse_genomes_project 10 100509934 100510197 - Gm27588 misc_RNA misc_RNA MGP_CBAJ_T0026777.1 MGP_CBAJ_G0017465.1 mouse_genomes_project 10 125876511 126293984 - MGP_CBAJ_P0026777 Trhde protein_coding protein_coding MGP_CBAJ_T0026778.1 MGP_CBAJ_G0017465.1 mouse_genomes_project 10 126030177 126294868 - Trhde protein_coding retained_intron MGP_CBAJ_T0026779.1 MGP_CBAJ_G0017465.1 mouse_genomes_project 10 126280088 126293931 - Trhde protein_coding retained_intron MGP_CBAJ_T0012301.1 MGP_CBAJ_G0010413.1 mouse_genomes_project 10 135007389 135008380 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098642.1 MGP_CBAJ_G0036897.1 mouse_genomes_project 10 93655720 93655824 - Gm24430 snRNA snRNA MGP_CBAJ_T0025418.1 MGP_CBAJ_G0017084.1 mouse_genomes_project 10 80917507 81051210 + MGP_CBAJ_P0025418 Bcr protein_coding protein_coding MGP_CBAJ_T0025419.1 MGP_CBAJ_G0017084.1 mouse_genomes_project 10 80917703 81051216 + MGP_CBAJ_P0025419 Bcr protein_coding unknown_likely_coding MGP_CBAJ_T0026598.1 MGP_CBAJ_G0017394.1 mouse_genomes_project 10 102727246 102848603 + MGP_CBAJ_P0026598 Fgd6 protein_coding protein_coding MGP_CBAJ_T0026599.1 MGP_CBAJ_G0017394.1 mouse_genomes_project 10 102769651 102790447 + Fgd6 protein_coding processed_transcript MGP_CBAJ_T0026600.1 MGP_CBAJ_G0017394.1 mouse_genomes_project 10 102836171 102843102 + Fgd6 protein_coding retained_intron MGP_CBAJ_T0009487.1 MGP_CBAJ_G0007625.1 mouse_genomes_project 10 87893733 87893793 - Mir5615-1 miRNA miRNA MGP_CBAJ_T0026375.1 MGP_CBAJ_G0017349.1 mouse_genomes_project 10 94502413 94563326 + MGP_CBAJ_P0026375 Nt5dc3 protein_coding protein_coding MGP_CBAJ_T0026046.1 MGP_CBAJ_G0017267.1 mouse_genomes_project 10 87809168 87818013 - MGP_CBAJ_P0026046 Slc39a3 protein_coding protein_coding MGP_CBAJ_T0026047.1 MGP_CBAJ_G0017267.1 mouse_genomes_project 10 87809170 87817895 - MGP_CBAJ_P0026047 Slc39a3 protein_coding protein_coding MGP_CBAJ_T0026048.1 MGP_CBAJ_G0017267.1 mouse_genomes_project 10 87809171 87814531 - MGP_CBAJ_P0026048 Slc39a3 protein_coding protein_coding MGP_CBAJ_T0026049.1 MGP_CBAJ_G0017267.1 mouse_genomes_project 10 87814475 87817869 - Slc39a3 protein_coding processed_transcript MGP_CBAJ_T0026050.1 MGP_CBAJ_G0017267.1 mouse_genomes_project 10 87814501 87817837 - Slc39a3 protein_coding processed_transcript MGP_CBAJ_T0024685.1 MGP_CBAJ_G0016893.1 mouse_genomes_project 10 41588402 41705715 - MGP_CBAJ_P0024685 Slc16a10 protein_coding protein_coding MGP_CBAJ_T0098631.1 MGP_CBAJ_G0036886.1 mouse_genomes_project 10 68709592 68709700 - Gm23854 snRNA snRNA MGP_CBAJ_T0027101.1 MGP_CBAJ_G0017569.1 mouse_genomes_project 10 141344739 141359531 + MGP_CBAJ_P0027101 protein_coding protein_coding MGP_CBAJ_T0027102.1 MGP_CBAJ_G0017569.1 mouse_genomes_project 10 141344749 141372711 + MGP_CBAJ_P0027102 protein_coding protein_coding MGP_CBAJ_T0012236.1 MGP_CBAJ_G0010348.1 mouse_genomes_project 10 901258 902151 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0025488.1 MGP_CBAJ_G0017104.1 mouse_genomes_project 10 81889519 81890291 - MGP_CBAJ_P0025488 Mmp11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025489.1 MGP_CBAJ_G0017104.1 mouse_genomes_project 10 81889519 81898773 - MGP_CBAJ_P0025489 Mmp11 protein_coding protein_coding MGP_CBAJ_T0025490.1 MGP_CBAJ_G0017104.1 mouse_genomes_project 10 81889519 81898800 - MGP_CBAJ_P0025490 Mmp11 protein_coding protein_coding MGP_CBAJ_T0025491.1 MGP_CBAJ_G0017104.1 mouse_genomes_project 10 81889520 81892710 - MGP_CBAJ_P0025491 Mmp11 protein_coding protein_coding MGP_CBAJ_T0025492.1 MGP_CBAJ_G0017104.1 mouse_genomes_project 10 81893057 81893988 - Mmp11 protein_coding retained_intron MGP_CBAJ_T0012265.1 MGP_CBAJ_G0010377.1 mouse_genomes_project 10 55132582 55133133 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0025234.1 MGP_CBAJ_G0017058.1 mouse_genomes_project 10 72406078 72410515 - MGP_CBAJ_P0025234 Ado protein_coding protein_coding MGP_CBAJ_T0012293.1 MGP_CBAJ_G0010405.1 mouse_genomes_project 10 115658743 115659667 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0026722.1 MGP_CBAJ_G0017442.1 mouse_genomes_project 10 117661071 117826666 + MGP_CBAJ_P0026722 Lin7a protein_coding protein_coding MGP_CBAJ_T0026723.1 MGP_CBAJ_G0017442.1 mouse_genomes_project 10 117661071 117826666 + MGP_CBAJ_P0026723 Lin7a protein_coding protein_coding MGP_CBAJ_T0002972.1 MGP_CBAJ_G0002779.1 mouse_genomes_project 10 72930575 72931152 - antisense antisense MGP_CBAJ_T0024904.1 MGP_CBAJ_G0016969.1 mouse_genomes_project 10 60236764 60243290 + MGP_CBAJ_P0024904 Gm9956 protein_coding protein_coding MGP_CBAJ_T0024353.1 MGP_CBAJ_G0016770.1 mouse_genomes_project 10 17002239 17015905 - MGP_CBAJ_P0024353 Ccdc28a protein_coding protein_coding MGP_CBAJ_T0024354.1 MGP_CBAJ_G0016770.1 mouse_genomes_project 10 17002332 17004885 - Ccdc28a protein_coding retained_intron MGP_CBAJ_T0024355.1 MGP_CBAJ_G0016770.1 mouse_genomes_project 10 17002615 17008136 - MGP_CBAJ_P0024355 Ccdc28a protein_coding protein_coding MGP_CBAJ_T0024356.1 MGP_CBAJ_G0016770.1 mouse_genomes_project 10 17002681 17024255 - MGP_CBAJ_P0024356 Ccdc28a protein_coding protein_coding MGP_CBAJ_T0024357.1 MGP_CBAJ_G0016770.1 mouse_genomes_project 10 17005333 17024247 - MGP_CBAJ_P0024357 Ccdc28a protein_coding protein_coding MGP_CBAJ_T0026143.1 MGP_CBAJ_G0017291.1 mouse_genomes_project 10 88211596 88223891 - MGP_CBAJ_P0026143 Fzr1 protein_coding protein_coding MGP_CBAJ_T0026144.1 MGP_CBAJ_G0017291.1 mouse_genomes_project 10 88212472 88223826 - MGP_CBAJ_P0026144 Fzr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026145.1 MGP_CBAJ_G0017291.1 mouse_genomes_project 10 88212746 88223838 - Fzr1 protein_coding retained_intron MGP_CBAJ_T0026146.1 MGP_CBAJ_G0017291.1 mouse_genomes_project 10 88212883 88216788 - MGP_CBAJ_P0026146 Fzr1 protein_coding protein_coding MGP_CBAJ_T0026147.1 MGP_CBAJ_G0017291.1 mouse_genomes_project 10 88213650 88214916 - Fzr1 protein_coding retained_intron MGP_CBAJ_T0026148.1 MGP_CBAJ_G0017291.1 mouse_genomes_project 10 88220737 88223755 - Fzr1 protein_coding processed_transcript MGP_CBAJ_T0099881.1 MGP_CBAJ_G0038136.1 mouse_genomes_project 10 121649212 121649340 + Gm23698 snoRNA snoRNA MGP_CBAJ_T0024812.1 MGP_CBAJ_G0016929.1 mouse_genomes_project 10 45646643 45651735 + MGP_CBAJ_P0024812 Cd24a protein_coding protein_coding MGP_CBAJ_T0005980.1 MGP_CBAJ_G0005000.1 mouse_genomes_project 10 6522502 6524779 + Gm26674 lincRNA lincRNA MGP_CBAJ_T0002949.1 MGP_CBAJ_G0002762.1 mouse_genomes_project 10 34455388 34493648 + Gm15939 antisense antisense MGP_CBAJ_T0025787.1 MGP_CBAJ_G0017200.1 mouse_genomes_project 10 86436028 86444594 + Prtn3 protein_coding processed_transcript MGP_CBAJ_T0025788.1 MGP_CBAJ_G0017200.1 mouse_genomes_project 10 86441166 86444727 + MGP_CBAJ_P0025788 Prtn3 protein_coding protein_coding MGP_CBAJ_T0025789.1 MGP_CBAJ_G0017200.1 mouse_genomes_project 10 86442532 86444727 + Prtn3 protein_coding retained_intron MGP_CBAJ_T0025790.1 MGP_CBAJ_G0017200.1 mouse_genomes_project 10 86442556 86443942 + Prtn3 protein_coding retained_intron MGP_CBAJ_T0025791.1 MGP_CBAJ_G0017200.1 mouse_genomes_project 10 86442594 86444397 + MGP_CBAJ_P0025791 Prtn3 protein_coding protein_coding MGP_CBAJ_T0025792.1 MGP_CBAJ_G0017200.1 mouse_genomes_project 10 86443335 86444433 + Prtn3 protein_coding retained_intron MGP_CBAJ_T0024572.1 MGP_CBAJ_G0016848.1 mouse_genomes_project 10 29820421 29908060 - MGP_CBAJ_P0024572 Rspo3 protein_coding protein_coding MGP_CBAJ_T0011164.1 MGP_CBAJ_G0009302.1 mouse_genomes_project 10 137606838 137607097 + Gm23777 misc_RNA misc_RNA MGP_CBAJ_T0025508.1 MGP_CBAJ_G0017112.1 mouse_genomes_project 10 82285303 82292602 + MGP_CBAJ_P0025508 S100b protein_coding protein_coding MGP_CBAJ_T0016874.1 MGP_CBAJ_G0014879.1 mouse_genomes_project 10 115730081 115738166 + Gm15663 processed_transcript antisense MGP_CBAJ_T0016875.1 MGP_CBAJ_G0014879.1 mouse_genomes_project 10 115730687 115740000 + Gm15663 processed_transcript lincRNA MGP_CBAJ_T0026653.1 MGP_CBAJ_G0017419.1 mouse_genomes_project 10 108490829 108495918 + MGP_CBAJ_P0026653 Galnt4 protein_coding protein_coding MGP_CBAJ_T0012269.1 MGP_CBAJ_G0010381.1 mouse_genomes_project 10 61410236 61410684 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0025496.1 MGP_CBAJ_G0017107.1 mouse_genomes_project 10 81920410 81989802 + MGP_CBAJ_P0025496 Gm5134 protein_coding protein_coding MGP_CBAJ_T0025497.1 MGP_CBAJ_G0017107.1 mouse_genomes_project 10 81950488 81978565 + Gm5134 protein_coding retained_intron MGP_CBAJ_T0026784.1 MGP_CBAJ_G0017469.1 mouse_genomes_project 10 126906989 126937373 - MGP_CBAJ_P0026784 Tmem19 protein_coding protein_coding MGP_CBAJ_T0024127.1 MGP_CBAJ_G0016720.1 mouse_genomes_project 10 3075153 3089150 - MGP_CBAJ_P0024127 Mtrf1l protein_coding protein_coding MGP_CBAJ_T0024128.1 MGP_CBAJ_G0016720.1 mouse_genomes_project 10 3076492 3079036 - Mtrf1l protein_coding processed_transcript MGP_CBAJ_T0024129.1 MGP_CBAJ_G0016720.1 mouse_genomes_project 10 3082431 3088786 - Mtrf1l protein_coding processed_transcript MGP_CBAJ_T0003011.1 MGP_CBAJ_G0002810.1 mouse_genomes_project 10 102309316 102318427 - Gm15915 antisense antisense MGP_CBAJ_T0026075.1 MGP_CBAJ_G0017273.1 mouse_genomes_project 10 87949032 87963634 - MGP_CBAJ_P0026075 Pias4 protein_coding protein_coding MGP_CBAJ_T0026076.1 MGP_CBAJ_G0017273.1 mouse_genomes_project 10 87950001 87951891 - Pias4 protein_coding retained_intron MGP_CBAJ_T0026077.1 MGP_CBAJ_G0017273.1 mouse_genomes_project 10 87951268 87953778 - Pias4 protein_coding retained_intron MGP_CBAJ_T0026078.1 MGP_CBAJ_G0017273.1 mouse_genomes_project 10 87951438 87963432 - MGP_CBAJ_P0026078 Pias4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026079.1 MGP_CBAJ_G0017273.1 mouse_genomes_project 10 87951625 87953026 - MGP_CBAJ_P0026079 Pias4 protein_coding protein_coding MGP_CBAJ_T0026080.1 MGP_CBAJ_G0017273.1 mouse_genomes_project 10 87958762 87963425 - Pias4 protein_coding retained_intron MGP_CBAJ_T0027319.1 MGP_CBAJ_G0017672.1 mouse_genomes_project 10 144206618 144229536 - MGP_CBAJ_P0027319 protein_coding protein_coding MGP_CBAJ_T0024453.1 MGP_CBAJ_G0016800.1 mouse_genomes_project 10 21689964 21715030 + MGP_CBAJ_P0024453 protein_coding protein_coding MGP_CBAJ_T0024455.1 MGP_CBAJ_G0016800.1 mouse_genomes_project 10 21692681 21715027 + MGP_CBAJ_P0024455 protein_coding protein_coding MGP_CBAJ_T0024456.1 MGP_CBAJ_G0016800.1 mouse_genomes_project 10 21693079 21715030 + MGP_CBAJ_P0024456 protein_coding protein_coding MGP_CBAJ_T0027278.1 MGP_CBAJ_G0017642.1 mouse_genomes_project 10 143442613 143443552 + MGP_CBAJ_P0027278 Olfr789 protein_coding protein_coding MGP_CBAJ_T0026877.1 MGP_CBAJ_G0017502.1 mouse_genomes_project 10 131836682 132584144 + MGP_CBAJ_P0026877 Grip1 protein_coding protein_coding MGP_CBAJ_T0026878.1 MGP_CBAJ_G0017502.1 mouse_genomes_project 10 131836961 132568406 + MGP_CBAJ_P0026878 Grip1 protein_coding protein_coding MGP_CBAJ_T0026879.1 MGP_CBAJ_G0017502.1 mouse_genomes_project 10 131836967 132569948 + MGP_CBAJ_P0026879 Grip1 protein_coding protein_coding MGP_CBAJ_T0026880.1 MGP_CBAJ_G0017502.1 mouse_genomes_project 10 132125373 132569948 + MGP_CBAJ_P0026880 Grip1 protein_coding unknown_likely_coding MGP_CBAJ_T0026881.1 MGP_CBAJ_G0017502.1 mouse_genomes_project 10 132255062 132569948 + MGP_CBAJ_P0026881 Grip1 protein_coding protein_coding MGP_CBAJ_T0026882.1 MGP_CBAJ_G0017502.1 mouse_genomes_project 10 132255071 132569325 + MGP_CBAJ_P0026882 Grip1 protein_coding protein_coding MGP_CBAJ_T0026883.1 MGP_CBAJ_G0017502.1 mouse_genomes_project 10 132255178 132486858 + Grip1 protein_coding retained_intron MGP_CBAJ_T0026884.1 MGP_CBAJ_G0017502.1 mouse_genomes_project 10 132255185 132568406 + MGP_CBAJ_P0026884 Grip1 protein_coding protein_coding MGP_CBAJ_T0026885.1 MGP_CBAJ_G0017502.1 mouse_genomes_project 10 132255185 132568406 + MGP_CBAJ_P0026885 Grip1 protein_coding protein_coding MGP_CBAJ_T0026886.1 MGP_CBAJ_G0017502.1 mouse_genomes_project 10 132255188 132568326 + MGP_CBAJ_P0026886 Grip1 protein_coding protein_coding MGP_CBAJ_T0026887.1 MGP_CBAJ_G0017502.1 mouse_genomes_project 10 132255198 132583944 + MGP_CBAJ_P0026887 Grip1 protein_coding protein_coding MGP_CBAJ_T0026888.1 MGP_CBAJ_G0017502.1 mouse_genomes_project 10 132296445 132569943 + Grip1 protein_coding retained_intron MGP_CBAJ_T0026889.1 MGP_CBAJ_G0017502.1 mouse_genomes_project 10 132359182 132568326 + Grip1 protein_coding processed_transcript MGP_CBAJ_T0026890.1 MGP_CBAJ_G0017502.1 mouse_genomes_project 10 132463734 132584145 + MGP_CBAJ_P0026890 Grip1 protein_coding protein_coding MGP_CBAJ_T0026891.1 MGP_CBAJ_G0017502.1 mouse_genomes_project 10 132463936 132569820 + MGP_CBAJ_P0026891 Grip1 protein_coding protein_coding MGP_CBAJ_T0026892.1 MGP_CBAJ_G0017502.1 mouse_genomes_project 10 132464084 132568602 + MGP_CBAJ_P0026892 Grip1 protein_coding protein_coding MGP_CBAJ_T0026893.1 MGP_CBAJ_G0017502.1 mouse_genomes_project 10 132464120 132584144 + MGP_CBAJ_P0026893 Grip1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0009516.1 MGP_CBAJ_G0007654.1 mouse_genomes_project 10 136162995 136163091 - Gm27920 miRNA miRNA MGP_CBAJ_T0006056.1 MGP_CBAJ_G0005051.1 mouse_genomes_project 10 103471388 103487548 - Cep83os lincRNA lincRNA MGP_CBAJ_T0011161.1 MGP_CBAJ_G0009299.1 mouse_genomes_project 10 119696325 119696603 - Gm22097 misc_RNA misc_RNA MGP_CBAJ_T0026991.1 MGP_CBAJ_G0017535.1 mouse_genomes_project 10 140474924 140482893 - MGP_CBAJ_P0026991 March9 protein_coding protein_coding MGP_CBAJ_T0025602.1 MGP_CBAJ_G0017134.1 mouse_genomes_project 10 83799999 83822125 + MGP_CBAJ_P0025602 Ube2g2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025603.1 MGP_CBAJ_G0017134.1 mouse_genomes_project 10 83800050 83823564 + MGP_CBAJ_P0025603 Ube2g2 protein_coding protein_coding MGP_CBAJ_T0025604.1 MGP_CBAJ_G0017134.1 mouse_genomes_project 10 83800054 83819066 + MGP_CBAJ_P0025604 Ube2g2 protein_coding protein_coding MGP_CBAJ_T0025605.1 MGP_CBAJ_G0017134.1 mouse_genomes_project 10 83818751 83822074 + Ube2g2 protein_coding retained_intron MGP_CBAJ_T0025657.1 MGP_CBAJ_G0017155.1 mouse_genomes_project 10 84592156 84680473 - MGP_CBAJ_P0025657 Agpat3 protein_coding protein_coding MGP_CBAJ_T0025658.1 MGP_CBAJ_G0017155.1 mouse_genomes_project 10 84594541 84679896 - MGP_CBAJ_P0025658 Agpat3 protein_coding protein_coding MGP_CBAJ_T0025659.1 MGP_CBAJ_G0017155.1 mouse_genomes_project 10 84594541 84623552 - MGP_CBAJ_P0025659 Agpat3 protein_coding protein_coding MGP_CBAJ_T0025660.1 MGP_CBAJ_G0017155.1 mouse_genomes_project 10 84594541 84680084 - MGP_CBAJ_P0025660 Agpat3 protein_coding protein_coding MGP_CBAJ_T0025661.1 MGP_CBAJ_G0017155.1 mouse_genomes_project 10 84594541 84679731 - MGP_CBAJ_P0025661 Agpat3 protein_coding protein_coding MGP_CBAJ_T0025662.1 MGP_CBAJ_G0017155.1 mouse_genomes_project 10 84596589 84618370 - MGP_CBAJ_P0025662 Agpat3 protein_coding protein_coding MGP_CBAJ_T0025663.1 MGP_CBAJ_G0017155.1 mouse_genomes_project 10 84596592 84601413 - Agpat3 protein_coding retained_intron MGP_CBAJ_T0025664.1 MGP_CBAJ_G0017155.1 mouse_genomes_project 10 84607243 84648862 - MGP_CBAJ_P0025664 Agpat3 protein_coding protein_coding MGP_CBAJ_T0025665.1 MGP_CBAJ_G0017155.1 mouse_genomes_project 10 84607289 84632904 - MGP_CBAJ_P0025665 Agpat3 protein_coding protein_coding MGP_CBAJ_T0025666.1 MGP_CBAJ_G0017155.1 mouse_genomes_project 10 84610831 84680520 - MGP_CBAJ_P0025666 Agpat3 protein_coding protein_coding MGP_CBAJ_T0025667.1 MGP_CBAJ_G0017155.1 mouse_genomes_project 10 84610842 84680243 - MGP_CBAJ_P0025667 Agpat3 protein_coding protein_coding MGP_CBAJ_T0098627.1 MGP_CBAJ_G0036882.1 mouse_genomes_project 10 57969024 57969086 - Gm25602 snRNA snRNA MGP_CBAJ_T0026560.1 MGP_CBAJ_G0017387.1 mouse_genomes_project 10 102160936 102207502 + MGP_CBAJ_P0026560 Ccdc38 protein_coding protein_coding MGP_CBAJ_T0026561.1 MGP_CBAJ_G0017387.1 mouse_genomes_project 10 102170274 102175503 + Ccdc38 protein_coding retained_intron MGP_CBAJ_T0026562.1 MGP_CBAJ_G0017387.1 mouse_genomes_project 10 102174818 102175548 + Ccdc38 protein_coding retained_intron MGP_CBAJ_T0026563.1 MGP_CBAJ_G0017387.1 mouse_genomes_project 10 102174821 102203670 + Ccdc38 protein_coding processed_transcript MGP_CBAJ_T0026564.1 MGP_CBAJ_G0017387.1 mouse_genomes_project 10 102185513 102194685 + Ccdc38 protein_coding processed_transcript MGP_CBAJ_T0003005.1 MGP_CBAJ_G0002806.1 mouse_genomes_project 10 94652159 94653412 + Gm16280 antisense antisense MGP_CBAJ_T0024343.1 MGP_CBAJ_G0016768.1 mouse_genomes_project 10 16825479 16902389 + MGP_CBAJ_P0024343 Reps1 protein_coding protein_coding MGP_CBAJ_T0024344.1 MGP_CBAJ_G0016768.1 mouse_genomes_project 10 16825524 16902403 + MGP_CBAJ_P0024344 Reps1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024345.1 MGP_CBAJ_G0016768.1 mouse_genomes_project 10 16825558 16902414 + MGP_CBAJ_P0024345 Reps1 protein_coding protein_coding MGP_CBAJ_T0024346.1 MGP_CBAJ_G0016768.1 mouse_genomes_project 10 16825581 16902401 + MGP_CBAJ_P0024346 Reps1 protein_coding protein_coding MGP_CBAJ_T0024347.1 MGP_CBAJ_G0016768.1 mouse_genomes_project 10 16862223 16877792 + Reps1 protein_coding retained_intron MGP_CBAJ_T0024348.1 MGP_CBAJ_G0016768.1 mouse_genomes_project 10 16866038 16876953 + MGP_CBAJ_P0024348 Reps1 protein_coding protein_coding MGP_CBAJ_T0024349.1 MGP_CBAJ_G0016768.1 mouse_genomes_project 10 16867398 16890496 + MGP_CBAJ_P0024349 Reps1 protein_coding protein_coding MGP_CBAJ_T0024350.1 MGP_CBAJ_G0016768.1 mouse_genomes_project 10 16887244 16894187 + Reps1 protein_coding retained_intron MGP_CBAJ_T0024351.1 MGP_CBAJ_G0016768.1 mouse_genomes_project 10 16896689 16897615 + Reps1 protein_coding retained_intron MGP_CBAJ_T0027114.1 MGP_CBAJ_G0017575.1 mouse_genomes_project 10 141653125 141662712 - MGP_CBAJ_P0027114 Hsd17b6 protein_coding protein_coding MGP_CBAJ_T0027302.1 MGP_CBAJ_G0017659.1 mouse_genomes_project 10 143788878 143789865 + MGP_CBAJ_P0027302 protein_coding protein_coding MGP_CBAJ_T0024240.1 MGP_CBAJ_G0016744.1 mouse_genomes_project 10 8509538 8955487 - MGP_CBAJ_P0024240 Grm1 protein_coding protein_coding MGP_CBAJ_T0024241.1 MGP_CBAJ_G0016744.1 mouse_genomes_project 10 8512067 8955436 - MGP_CBAJ_P0024241 Grm1 protein_coding protein_coding MGP_CBAJ_T0024242.1 MGP_CBAJ_G0016744.1 mouse_genomes_project 10 8512285 8954036 - MGP_CBAJ_P0024242 Grm1 protein_coding protein_coding MGP_CBAJ_T0024243.1 MGP_CBAJ_G0016744.1 mouse_genomes_project 10 8512922 8547995 - Grm1 protein_coding processed_transcript MGP_CBAJ_T0024244.1 MGP_CBAJ_G0016744.1 mouse_genomes_project 10 8578467 8581094 - Grm1 protein_coding processed_transcript MGP_CBAJ_T0024245.1 MGP_CBAJ_G0016744.1 mouse_genomes_project 10 8953568 8955381 - Grm1 protein_coding processed_transcript MGP_CBAJ_T0026831.1 MGP_CBAJ_G0017482.1 mouse_genomes_project 10 128803325 128821287 - MGP_CBAJ_P0026831 Gm10271 protein_coding protein_coding MGP_CBAJ_T0009455.1 MGP_CBAJ_G0007593.1 mouse_genomes_project 10 24685749 24685819 + Mir6905 miRNA miRNA MGP_CBAJ_T0025853.1 MGP_CBAJ_G0017218.1 mouse_genomes_project 10 86737553 86744490 - MGP_CBAJ_P0025853 Cbarp protein_coding protein_coding MGP_CBAJ_T0025854.1 MGP_CBAJ_G0017218.1 mouse_genomes_project 10 86737553 86744490 - MGP_CBAJ_P0025854 Cbarp protein_coding protein_coding MGP_CBAJ_T0025855.1 MGP_CBAJ_G0017218.1 mouse_genomes_project 10 86737653 86746459 - MGP_CBAJ_P0025855 Cbarp protein_coding nonsense_mediated_decay MGP_CBAJ_T0025856.1 MGP_CBAJ_G0017218.1 mouse_genomes_project 10 86737653 86746459 - MGP_CBAJ_P0025856 Cbarp protein_coding protein_coding MGP_CBAJ_T0025857.1 MGP_CBAJ_G0017218.1 mouse_genomes_project 10 86739638 86741784 - Cbarp protein_coding retained_intron MGP_CBAJ_T0025858.1 MGP_CBAJ_G0017218.1 mouse_genomes_project 10 86740176 86742691 - Cbarp protein_coding retained_intron MGP_CBAJ_T0025859.1 MGP_CBAJ_G0017218.1 mouse_genomes_project 10 86742220 86746457 - MGP_CBAJ_P0025859 Cbarp protein_coding nonsense_mediated_decay MGP_CBAJ_T0025860.1 MGP_CBAJ_G0017218.1 mouse_genomes_project 10 86742260 86746272 - MGP_CBAJ_P0025860 Cbarp protein_coding nonsense_mediated_decay MGP_CBAJ_T0025861.1 MGP_CBAJ_G0017218.1 mouse_genomes_project 10 86742618 86744998 - Cbarp protein_coding processed_transcript MGP_CBAJ_T0025862.1 MGP_CBAJ_G0017218.1 mouse_genomes_project 10 86743747 86744985 - Cbarp protein_coding processed_transcript MGP_CBAJ_T0025863.1 MGP_CBAJ_G0017218.1 mouse_genomes_project 10 86743765 86744455 - Cbarp protein_coding processed_transcript MGP_CBAJ_T0025864.1 MGP_CBAJ_G0017218.1 mouse_genomes_project 10 86743810 86744741 - Cbarp protein_coding retained_intron MGP_CBAJ_T0025865.1 MGP_CBAJ_G0017218.1 mouse_genomes_project 10 86743976 86744685 - Cbarp protein_coding retained_intron MGP_CBAJ_T0025866.1 MGP_CBAJ_G0017218.1 mouse_genomes_project 10 86744449 86745710 - Cbarp protein_coding processed_transcript MGP_CBAJ_T0025867.1 MGP_CBAJ_G0017218.1 mouse_genomes_project 10 86744449 86747951 - MGP_CBAJ_P0025867 Cbarp protein_coding protein_coding MGP_CBAJ_T0026673.1 MGP_CBAJ_G0017430.1 mouse_genomes_project 10 110101088 110113794 + MGP_CBAJ_P0026673 1700017N19Rik protein_coding protein_coding MGP_CBAJ_T0026674.1 MGP_CBAJ_G0017430.1 mouse_genomes_project 10 110102926 110128763 + MGP_CBAJ_P0026674 1700017N19Rik protein_coding protein_coding MGP_CBAJ_T0026675.1 MGP_CBAJ_G0017430.1 mouse_genomes_project 10 110102946 110128849 + MGP_CBAJ_P0026675 1700017N19Rik protein_coding protein_coding MGP_CBAJ_T0026676.1 MGP_CBAJ_G0017430.1 mouse_genomes_project 10 110102952 110123064 + MGP_CBAJ_P0026676 1700017N19Rik protein_coding protein_coding MGP_CBAJ_T0026677.1 MGP_CBAJ_G0017430.1 mouse_genomes_project 10 110102957 110128843 + MGP_CBAJ_P0026677 1700017N19Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0026678.1 MGP_CBAJ_G0017430.1 mouse_genomes_project 10 110102961 110128843 + MGP_CBAJ_P0026678 1700017N19Rik protein_coding protein_coding MGP_CBAJ_T0026679.1 MGP_CBAJ_G0017430.1 mouse_genomes_project 10 110102972 110128765 + MGP_CBAJ_P0026679 1700017N19Rik protein_coding protein_coding MGP_CBAJ_T0026680.1 MGP_CBAJ_G0017430.1 mouse_genomes_project 10 110102984 110128853 + MGP_CBAJ_P0026680 1700017N19Rik protein_coding protein_coding MGP_CBAJ_T0026681.1 MGP_CBAJ_G0017430.1 mouse_genomes_project 10 110119700 110128760 + MGP_CBAJ_P0026681 1700017N19Rik protein_coding protein_coding MGP_CBAJ_T0006010.1 MGP_CBAJ_G0005025.1 mouse_genomes_project 10 67538230 67546722 - lincRNA lincRNA MGP_CBAJ_T0012251.1 MGP_CBAJ_G0010363.1 mouse_genomes_project 10 25774115 25774733 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0024930.1 MGP_CBAJ_G0016978.1 mouse_genomes_project 10 61563298 61582056 + MGP_CBAJ_P0024930 Gcc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024931.1 MGP_CBAJ_G0016978.1 mouse_genomes_project 10 61563320 61618603 + MGP_CBAJ_P0024931 Gcc2 protein_coding protein_coding MGP_CBAJ_T0024932.1 MGP_CBAJ_G0016978.1 mouse_genomes_project 10 61563356 61618961 + MGP_CBAJ_P0024932 Gcc2 protein_coding protein_coding MGP_CBAJ_T0024933.1 MGP_CBAJ_G0016978.1 mouse_genomes_project 10 61563503 61581928 + MGP_CBAJ_P0024933 Gcc2 protein_coding protein_coding MGP_CBAJ_T0024934.1 MGP_CBAJ_G0016978.1 mouse_genomes_project 10 61563681 61580639 + Gcc2 protein_coding processed_transcript MGP_CBAJ_T0024935.1 MGP_CBAJ_G0016978.1 mouse_genomes_project 10 61586038 61589848 + Gcc2 protein_coding retained_intron MGP_CBAJ_T0024936.1 MGP_CBAJ_G0016978.1 mouse_genomes_project 10 61587549 61594876 + MGP_CBAJ_P0024936 Gcc2 protein_coding protein_coding MGP_CBAJ_T0024937.1 MGP_CBAJ_G0016978.1 mouse_genomes_project 10 61599358 61606200 + Gcc2 protein_coding retained_intron MGP_CBAJ_T0024938.1 MGP_CBAJ_G0016978.1 mouse_genomes_project 10 61611851 61618950 + Gcc2 protein_coding retained_intron MGP_CBAJ_T0024178.1 MGP_CBAJ_G0016727.1 mouse_genomes_project 10 5058718 5080324 + MGP_CBAJ_P0024178 Lrp11 protein_coding protein_coding MGP_CBAJ_T0024179.1 MGP_CBAJ_G0016727.1 mouse_genomes_project 10 5058970 5099985 + MGP_CBAJ_P0024179 Lrp11 protein_coding protein_coding MGP_CBAJ_T0024180.1 MGP_CBAJ_G0016727.1 mouse_genomes_project 10 5059045 5098531 + MGP_CBAJ_P0024180 Lrp11 protein_coding protein_coding MGP_CBAJ_T0024181.1 MGP_CBAJ_G0016727.1 mouse_genomes_project 10 5067983 5098261 + MGP_CBAJ_P0024181 Lrp11 protein_coding protein_coding MGP_CBAJ_T0025126.1 MGP_CBAJ_G0017029.1 mouse_genomes_project 10 66427098 66468609 - MGP_CBAJ_P0025126 Hkdc1 protein_coding protein_coding MGP_CBAJ_T0025127.1 MGP_CBAJ_G0017029.1 mouse_genomes_project 10 66441144 66446347 - Hkdc1 protein_coding retained_intron MGP_CBAJ_T0025128.1 MGP_CBAJ_G0017029.1 mouse_genomes_project 10 66455658 66457674 - Hkdc1 protein_coding retained_intron MGP_CBAJ_T0025129.1 MGP_CBAJ_G0017029.1 mouse_genomes_project 10 66462500 66468526 - Hkdc1 protein_coding retained_intron MGP_CBAJ_T0011150.1 MGP_CBAJ_G0009288.1 mouse_genomes_project 10 84702944 84703252 - Gm22514 misc_RNA misc_RNA MGP_CBAJ_T0024807.1 MGP_CBAJ_G0016927.1 mouse_genomes_project 10 45524621 45563237 + MGP_CBAJ_P0024807 Bend3 protein_coding protein_coding MGP_CBAJ_T0027288.1 MGP_CBAJ_G0017650.1 mouse_genomes_project 10 143643919 143644855 + MGP_CBAJ_P0027288 Olfr800 protein_coding protein_coding MGP_CBAJ_T0026399.1 MGP_CBAJ_G0017355.1 mouse_genomes_project 10 95975058 95976362 + MGP_CBAJ_P0026399 Pmch protein_coding protein_coding MGP_CBAJ_T0098657.1 MGP_CBAJ_G0036912.1 mouse_genomes_project 10 124209920 124210080 + Gm22507 snRNA snRNA MGP_CBAJ_T0025465.1 MGP_CBAJ_G0017095.1 mouse_genomes_project 10 81712573 81714378 - MGP_CBAJ_P0025465 Ddt protein_coding protein_coding MGP_CBAJ_T0025466.1 MGP_CBAJ_G0017095.1 mouse_genomes_project 10 81712576 81714758 - MGP_CBAJ_P0025466 Ddt protein_coding protein_coding MGP_CBAJ_T0026414.1 MGP_CBAJ_G0017359.1 mouse_genomes_project 10 96230103 96269051 - MGP_CBAJ_P0026414 Dram1 protein_coding protein_coding MGP_CBAJ_T0026415.1 MGP_CBAJ_G0017359.1 mouse_genomes_project 10 96230103 96268972 - MGP_CBAJ_P0026415 Dram1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026416.1 MGP_CBAJ_G0017359.1 mouse_genomes_project 10 96250549 96303679 - MGP_CBAJ_P0026416 Dram1 protein_coding protein_coding MGP_CBAJ_T0024459.1 MGP_CBAJ_G0016802.1 mouse_genomes_project 10 22186701 22217716 - MGP_CBAJ_P0024459 Tbpl1 protein_coding protein_coding MGP_CBAJ_T0024460.1 MGP_CBAJ_G0016802.1 mouse_genomes_project 10 22188200 22218207 - MGP_CBAJ_P0024460 Tbpl1 protein_coding protein_coding MGP_CBAJ_T0024461.1 MGP_CBAJ_G0016802.1 mouse_genomes_project 10 22188342 22189205 - Tbpl1 protein_coding processed_transcript MGP_CBAJ_T0024462.1 MGP_CBAJ_G0016802.1 mouse_genomes_project 10 22194600 22217630 - Tbpl1 protein_coding retained_intron MGP_CBAJ_T0098155.1 MGP_CBAJ_G0036428.1 mouse_genomes_project 10 44808713 44809018 - Gm26464 ribozyme ribozyme MGP_CBAJ_T0099852.1 MGP_CBAJ_G0038107.1 mouse_genomes_project 10 41847521 41847734 + Rnu3a snoRNA snoRNA MGP_CBAJ_T0024502.1 MGP_CBAJ_G0016829.1 mouse_genomes_project 10 24643430 24688967 + MGP_CBAJ_P0024502 Med23 protein_coding protein_coding MGP_CBAJ_T0024503.1 MGP_CBAJ_G0016829.1 mouse_genomes_project 10 24643481 24669431 + Med23 protein_coding retained_intron MGP_CBAJ_T0024504.1 MGP_CBAJ_G0016829.1 mouse_genomes_project 10 24643481 24681851 + MGP_CBAJ_P0024504 Med23 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024505.1 MGP_CBAJ_G0016829.1 mouse_genomes_project 10 24643491 24688746 + MGP_CBAJ_P0024505 Med23 protein_coding protein_coding MGP_CBAJ_T0024506.1 MGP_CBAJ_G0016829.1 mouse_genomes_project 10 24643542 24673573 + Med23 protein_coding processed_transcript MGP_CBAJ_T0024507.1 MGP_CBAJ_G0016829.1 mouse_genomes_project 10 24643754 24651901 + MGP_CBAJ_P0024507 Med23 protein_coding protein_coding MGP_CBAJ_T0024508.1 MGP_CBAJ_G0016829.1 mouse_genomes_project 10 24644088 24649114 + Med23 protein_coding retained_intron MGP_CBAJ_T0024509.1 MGP_CBAJ_G0016829.1 mouse_genomes_project 10 24650390 24667768 + MGP_CBAJ_P0024509 Med23 protein_coding protein_coding MGP_CBAJ_T0024510.1 MGP_CBAJ_G0016829.1 mouse_genomes_project 10 24661545 24688306 + MGP_CBAJ_P0024510 Med23 protein_coding protein_coding MGP_CBAJ_T0024511.1 MGP_CBAJ_G0016829.1 mouse_genomes_project 10 24664061 24667760 + Med23 protein_coding retained_intron MGP_CBAJ_T0025693.1 MGP_CBAJ_G0017173.1 mouse_genomes_project 10 85435853 85437151 + MGP_CBAJ_P0025693 Olfr57 protein_coding protein_coding MGP_CBAJ_T0002982.1 MGP_CBAJ_G0002788.1 mouse_genomes_project 10 82634775 82640295 - Gm15343 antisense antisense MGP_CBAJ_T0027193.1 MGP_CBAJ_G0017600.1 mouse_genomes_project 10 142283288 142289219 - MGP_CBAJ_P0027193 Myl6b protein_coding protein_coding MGP_CBAJ_T0002961.1 MGP_CBAJ_G0002770.1 mouse_genomes_project 10 45188529 45188823 + antisense antisense MGP_CBAJ_T0025004.1 MGP_CBAJ_G0017000.1 mouse_genomes_project 10 63867346 63892453 + MGP_CBAJ_P0025004 Psap protein_coding protein_coding MGP_CBAJ_T0025005.1 MGP_CBAJ_G0017000.1 mouse_genomes_project 10 63867347 63892456 + MGP_CBAJ_P0025005 Psap protein_coding protein_coding MGP_CBAJ_T0025006.1 MGP_CBAJ_G0017000.1 mouse_genomes_project 10 63867347 63892456 + MGP_CBAJ_P0025006 Psap protein_coding protein_coding MGP_CBAJ_T0025007.1 MGP_CBAJ_G0017000.1 mouse_genomes_project 10 63867347 63892456 + MGP_CBAJ_P0025007 Psap protein_coding protein_coding MGP_CBAJ_T0025008.1 MGP_CBAJ_G0017000.1 mouse_genomes_project 10 63874495 63892456 + MGP_CBAJ_P0025008 Psap protein_coding protein_coding MGP_CBAJ_T0024876.1 MGP_CBAJ_G0016957.1 mouse_genomes_project 10 55452378 55464663 + MGP_CBAJ_P0024876 Nepn protein_coding protein_coding MGP_CBAJ_T0024877.1 MGP_CBAJ_G0016957.1 mouse_genomes_project 10 55455000 55468314 + MGP_CBAJ_P0024877 Nepn protein_coding protein_coding MGP_CBAJ_T0025678.1 MGP_CBAJ_G0017164.1 mouse_genomes_project 10 85131622 85140170 - MGP_CBAJ_P0025678 Ccdc105 protein_coding protein_coding MGP_CBAJ_T0026958.1 MGP_CBAJ_G0017523.1 mouse_genomes_project 10 135937579 136026417 - MGP_CBAJ_P0026958 Mon2 protein_coding protein_coding MGP_CBAJ_T0026959.1 MGP_CBAJ_G0017523.1 mouse_genomes_project 10 135937579 136026417 - MGP_CBAJ_P0026959 Mon2 protein_coding protein_coding MGP_CBAJ_T0026960.1 MGP_CBAJ_G0017523.1 mouse_genomes_project 10 135937579 136026417 - MGP_CBAJ_P0026960 Mon2 protein_coding protein_coding MGP_CBAJ_T0026601.1 MGP_CBAJ_G0017395.1 mouse_genomes_project 10 102851282 102911337 + MGP_CBAJ_P0026601 Nr2c1 protein_coding protein_coding MGP_CBAJ_T0026602.1 MGP_CBAJ_G0017395.1 mouse_genomes_project 10 102851678 102909809 + MGP_CBAJ_P0026602 Nr2c1 protein_coding protein_coding MGP_CBAJ_T0026603.1 MGP_CBAJ_G0017395.1 mouse_genomes_project 10 102859581 102909479 + MGP_CBAJ_P0026603 Nr2c1 protein_coding protein_coding MGP_CBAJ_T0024391.1 MGP_CBAJ_G0016784.1 mouse_genomes_project 10 18918726 19152614 + MGP_CBAJ_P0024391 Map3k5 protein_coding protein_coding MGP_CBAJ_T0024392.1 MGP_CBAJ_G0016784.1 mouse_genomes_project 10 18918780 19151531 + MGP_CBAJ_P0024392 Map3k5 protein_coding protein_coding MGP_CBAJ_T0024393.1 MGP_CBAJ_G0016784.1 mouse_genomes_project 10 18919476 19110270 + MGP_CBAJ_P0024393 Map3k5 protein_coding protein_coding MGP_CBAJ_T0024394.1 MGP_CBAJ_G0016784.1 mouse_genomes_project 10 18935349 19031046 + MGP_CBAJ_P0024394 Map3k5 protein_coding protein_coding MGP_CBAJ_T0024395.1 MGP_CBAJ_G0016784.1 mouse_genomes_project 10 19109636 19115534 + Map3k5 protein_coding processed_transcript MGP_CBAJ_T0024396.1 MGP_CBAJ_G0016784.1 mouse_genomes_project 10 19134766 19137650 + Map3k5 protein_coding retained_intron MGP_CBAJ_T0024397.1 MGP_CBAJ_G0016784.1 mouse_genomes_project 10 19137649 19148412 + Map3k5 protein_coding retained_intron MGP_CBAJ_T0026286.1 MGP_CBAJ_G0017321.1 mouse_genomes_project 10 90814398 90868184 - MGP_CBAJ_P0026286 Aldh1l2 protein_coding protein_coding MGP_CBAJ_T0026287.1 MGP_CBAJ_G0017321.1 mouse_genomes_project 10 90817156 90819837 - Aldh1l2 protein_coding processed_transcript MGP_CBAJ_T0026288.1 MGP_CBAJ_G0017321.1 mouse_genomes_project 10 90818559 90821322 - Aldh1l2 protein_coding processed_transcript MGP_CBAJ_T0026289.1 MGP_CBAJ_G0017321.1 mouse_genomes_project 10 90818561 90868251 - Aldh1l2 protein_coding retained_intron MGP_CBAJ_T0026290.1 MGP_CBAJ_G0017321.1 mouse_genomes_project 10 90823694 90834838 - Aldh1l2 protein_coding processed_transcript MGP_CBAJ_T0026291.1 MGP_CBAJ_G0017321.1 mouse_genomes_project 10 90827876 90840617 - Aldh1l2 protein_coding processed_transcript MGP_CBAJ_T0012299.1 MGP_CBAJ_G0010411.1 mouse_genomes_project 10 131175297 131176205 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101020.1 MGP_CBAJ_G0039258.1 mouse_genomes_project 10 129585158 129586688 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101021.1 MGP_CBAJ_G0039258.1 mouse_genomes_project 10 129585531 129586094 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0012271.1 MGP_CBAJ_G0010383.1 mouse_genomes_project 10 65147353 65147800 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0025610.1 MGP_CBAJ_G0017139.1 mouse_genomes_project 10 83913831 83914589 + MGP_CBAJ_P0025610 Krtap12-1 protein_coding protein_coding MGP_CBAJ_T0099844.1 MGP_CBAJ_G0038099.1 mouse_genomes_project 10 27640017 27640089 + Gm23353 snoRNA snoRNA MGP_CBAJ_T0099862.1 MGP_CBAJ_G0038117.1 mouse_genomes_project 10 67097875 67098004 - Gm25862 snoRNA snoRNA MGP_CBAJ_T0005988.1 MGP_CBAJ_G0005006.1 mouse_genomes_project 10 15586103 15743598 - Gm20125 lincRNA lincRNA MGP_CBAJ_T0024678.1 MGP_CBAJ_G0016891.1 mouse_genomes_project 10 41503695 41534218 - MGP_CBAJ_P0024678 Mfsd4b5 protein_coding protein_coding MGP_CBAJ_T0024679.1 MGP_CBAJ_G0016891.1 mouse_genomes_project 10 41516436 41534221 - MGP_CBAJ_P0024679 Mfsd4b5 protein_coding protein_coding MGP_CBAJ_T0024680.1 MGP_CBAJ_G0016891.1 mouse_genomes_project 10 41518288 41534214 - MGP_CBAJ_P0024680 Mfsd4b5 protein_coding protein_coding MGP_CBAJ_T0024681.1 MGP_CBAJ_G0016891.1 mouse_genomes_project 10 41521254 41534215 - MGP_CBAJ_P0024681 Mfsd4b5 protein_coding protein_coding MGP_CBAJ_T0024682.1 MGP_CBAJ_G0016891.1 mouse_genomes_project 10 41522229 41522883 - MGP_CBAJ_P0024682 Mfsd4b5 protein_coding protein_coding MGP_CBAJ_T0024258.1 MGP_CBAJ_G0016748.1 mouse_genomes_project 10 10370533 10548670 - MGP_CBAJ_P0024258 Utrn protein_coding unknown_likely_coding MGP_CBAJ_T0024259.1 MGP_CBAJ_G0016748.1 mouse_genomes_project 10 10370535 10899542 - MGP_CBAJ_P0024259 Utrn protein_coding protein_coding MGP_CBAJ_T0024260.1 MGP_CBAJ_G0016748.1 mouse_genomes_project 10 10630289 10906130 - MGP_CBAJ_P0024260 Utrn protein_coding unknown_likely_coding MGP_CBAJ_T0097894.1 MGP_CBAJ_G0036167.1 mouse_genomes_project 10 84877464 84877580 + Gm25164 rRNA rRNA MGP_CBAJ_T0006013.1 MGP_CBAJ_G0005028.1 mouse_genomes_project 10 70809388 70958975 - 1700023F02Rik lincRNA lincRNA MGP_CBAJ_T0006014.1 MGP_CBAJ_G0005028.1 mouse_genomes_project 10 70809388 70812823 - 1700023F02Rik lincRNA lincRNA MGP_CBAJ_T0006015.1 MGP_CBAJ_G0005028.1 mouse_genomes_project 10 70809392 70812837 - 1700023F02Rik lincRNA lincRNA MGP_CBAJ_T0006016.1 MGP_CBAJ_G0005028.1 mouse_genomes_project 10 70809392 70812839 - 1700023F02Rik lincRNA lincRNA MGP_CBAJ_T0006017.1 MGP_CBAJ_G0005028.1 mouse_genomes_project 10 70809459 70811849 - 1700023F02Rik lincRNA lincRNA MGP_CBAJ_T0024308.1 MGP_CBAJ_G0016757.1 mouse_genomes_project 10 11693285 11703747 + MGP_CBAJ_P0024308 Adat2 protein_coding protein_coding MGP_CBAJ_T0025227.1 MGP_CBAJ_G0017057.1 mouse_genomes_project 10 72393792 72401813 + MGP_CBAJ_P0025227 Egr2 protein_coding protein_coding MGP_CBAJ_T0025228.1 MGP_CBAJ_G0017057.1 mouse_genomes_project 10 72393900 72401948 + MGP_CBAJ_P0025228 Egr2 protein_coding protein_coding MGP_CBAJ_T0025229.1 MGP_CBAJ_G0017057.1 mouse_genomes_project 10 72399121 72403755 + MGP_CBAJ_P0025229 Egr2 protein_coding protein_coding MGP_CBAJ_T0025230.1 MGP_CBAJ_G0017057.1 mouse_genomes_project 10 72399122 72403755 + MGP_CBAJ_P0025230 Egr2 protein_coding protein_coding MGP_CBAJ_T0025231.1 MGP_CBAJ_G0017057.1 mouse_genomes_project 10 72399122 72399951 + MGP_CBAJ_P0025231 Egr2 protein_coding protein_coding MGP_CBAJ_T0025232.1 MGP_CBAJ_G0017057.1 mouse_genomes_project 10 72399182 72401508 + MGP_CBAJ_P0025232 Egr2 protein_coding protein_coding MGP_CBAJ_T0025233.1 MGP_CBAJ_G0017057.1 mouse_genomes_project 10 72400253 72403755 + MGP_CBAJ_P0025233 Egr2 protein_coding protein_coding MGP_CBAJ_T0024473.1 MGP_CBAJ_G0016807.1 mouse_genomes_project 10 23428266 23448594 + MGP_CBAJ_P0024473 Vnn3 protein_coding protein_coding MGP_CBAJ_T0024906.1 MGP_CBAJ_G0016971.1 mouse_genomes_project 10 61122700 61139457 - MGP_CBAJ_P0024906 Serinc1 protein_coding protein_coding MGP_CBAJ_T0024907.1 MGP_CBAJ_G0016971.1 mouse_genomes_project 10 61129961 61139355 - MGP_CBAJ_P0024907 Serinc1 protein_coding protein_coding MGP_CBAJ_T0024908.1 MGP_CBAJ_G0016971.1 mouse_genomes_project 10 61130110 61139337 - MGP_CBAJ_P0024908 Serinc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024909.1 MGP_CBAJ_G0016971.1 mouse_genomes_project 10 61132151 61139404 - Serinc1 protein_coding retained_intron MGP_CBAJ_T0024910.1 MGP_CBAJ_G0016971.1 mouse_genomes_project 10 61132157 61139336 - Serinc1 protein_coding retained_intron MGP_CBAJ_T0099879.1 MGP_CBAJ_G0038134.1 mouse_genomes_project 10 117494859 117494944 + Gm24745 snoRNA snoRNA MGP_CBAJ_T0012280.1 MGP_CBAJ_G0010392.1 mouse_genomes_project 10 81547318 81547742 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0026189.1 MGP_CBAJ_G0017300.1 mouse_genomes_project 10 88451857 88462951 + MGP_CBAJ_P0026189 Aes protein_coding protein_coding MGP_CBAJ_T0026313.1 MGP_CBAJ_G0017327.1 mouse_genomes_project 10 92053889 92094663 + MGP_CBAJ_P0026313 Tcp11l2 protein_coding protein_coding MGP_CBAJ_T0026314.1 MGP_CBAJ_G0017327.1 mouse_genomes_project 10 92054160 92072561 + Tcp11l2 protein_coding retained_intron MGP_CBAJ_T0026315.1 MGP_CBAJ_G0017327.1 mouse_genomes_project 10 92071915 92085279 + Tcp11l2 protein_coding retained_intron MGP_CBAJ_T0098252.1 MGP_CBAJ_G0036524.1 mouse_genomes_project 10 79145702 79185261 + Gm15397 sense_intronic sense_intronic MGP_CBAJ_T0026798.1 MGP_CBAJ_G0017473.1 mouse_genomes_project 10 127169995 127189375 + MGP_CBAJ_P0026798 A930009A15Rik protein_coding protein_coding MGP_CBAJ_T0025567.1 MGP_CBAJ_G0017129.1 mouse_genomes_project 10 83454530 83583967 - MGP_CBAJ_P0025567 Adarb1 protein_coding protein_coding MGP_CBAJ_T0025568.1 MGP_CBAJ_G0017129.1 mouse_genomes_project 10 83454530 83583972 - MGP_CBAJ_P0025568 Adarb1 protein_coding protein_coding MGP_CBAJ_T0025569.1 MGP_CBAJ_G0017129.1 mouse_genomes_project 10 83454531 83583972 - MGP_CBAJ_P0025569 Adarb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025570.1 MGP_CBAJ_G0017129.1 mouse_genomes_project 10 83454531 83583929 - MGP_CBAJ_P0025570 Adarb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025571.1 MGP_CBAJ_G0017129.1 mouse_genomes_project 10 83454531 83583929 - MGP_CBAJ_P0025571 Adarb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025572.1 MGP_CBAJ_G0017129.1 mouse_genomes_project 10 83454532 83583972 - MGP_CBAJ_P0025572 Adarb1 protein_coding protein_coding MGP_CBAJ_T0025573.1 MGP_CBAJ_G0017129.1 mouse_genomes_project 10 83479755 83583913 - Adarb1 protein_coding retained_intron MGP_CBAJ_T0025574.1 MGP_CBAJ_G0017129.1 mouse_genomes_project 10 83479769 83583967 - Adarb1 protein_coding retained_intron MGP_CBAJ_T0025575.1 MGP_CBAJ_G0017129.1 mouse_genomes_project 10 83488416 83583940 - Adarb1 protein_coding retained_intron MGP_CBAJ_T0025576.1 MGP_CBAJ_G0017129.1 mouse_genomes_project 10 83490963 83583556 - Adarb1 protein_coding retained_intron MGP_CBAJ_T0025577.1 MGP_CBAJ_G0017129.1 mouse_genomes_project 10 83491154 83583919 - Adarb1 protein_coding retained_intron MGP_CBAJ_T0025578.1 MGP_CBAJ_G0017129.1 mouse_genomes_project 10 83491340 83505790 - Adarb1 protein_coding retained_intron MGP_CBAJ_T0025579.1 MGP_CBAJ_G0017129.1 mouse_genomes_project 10 83491415 83533343 - Adarb1 protein_coding retained_intron MGP_CBAJ_T0099882.1 MGP_CBAJ_G0038137.1 mouse_genomes_project 10 121749443 121749565 - Gm22186 snoRNA snoRNA MGP_CBAJ_T0027230.1 MGP_CBAJ_G0017615.1 mouse_genomes_project 10 142652100 142656435 - MGP_CBAJ_P0027230 Tmem198b protein_coding protein_coding MGP_CBAJ_T0027231.1 MGP_CBAJ_G0017615.1 mouse_genomes_project 10 142652169 142656026 - MGP_CBAJ_P0027231 Tmem198b protein_coding nonsense_mediated_decay MGP_CBAJ_T0027232.1 MGP_CBAJ_G0017615.1 mouse_genomes_project 10 142652905 142655782 - MGP_CBAJ_P0027232 Tmem198b protein_coding nonsense_mediated_decay MGP_CBAJ_T0025494.1 MGP_CBAJ_G0017106.1 mouse_genomes_project 10 81909196 81915543 + MGP_CBAJ_P0025494 Vpreb3 protein_coding protein_coding MGP_CBAJ_T0025495.1 MGP_CBAJ_G0017106.1 mouse_genomes_project 10 81914205 81915563 + MGP_CBAJ_P0025495 Vpreb3 protein_coding protein_coding MGP_CBAJ_T0025520.1 MGP_CBAJ_G0017116.1 mouse_genomes_project 10 82515596 82527167 - MGP_CBAJ_P0025520 Ybey protein_coding protein_coding MGP_CBAJ_T0025236.1 MGP_CBAJ_G0017060.1 mouse_genomes_project 10 72786484 72813044 - MGP_CBAJ_P0025236 Zfp365 protein_coding protein_coding MGP_CBAJ_T0025237.1 MGP_CBAJ_G0017060.1 mouse_genomes_project 10 72786549 72801647 - Zfp365 protein_coding processed_transcript MGP_CBAJ_T0025238.1 MGP_CBAJ_G0017060.1 mouse_genomes_project 10 72790327 72799333 - Zfp365 protein_coding processed_transcript MGP_CBAJ_T0025239.1 MGP_CBAJ_G0017060.1 mouse_genomes_project 10 72797030 72812817 - Zfp365 protein_coding retained_intron MGP_CBAJ_T0024297.1 MGP_CBAJ_G0016755.1 mouse_genomes_project 10 11636827 11638461 + MGP_CBAJ_P0024297 Fuca2 protein_coding protein_coding MGP_CBAJ_T0024298.1 MGP_CBAJ_G0016755.1 mouse_genomes_project 10 11636831 11644033 + MGP_CBAJ_P0024298 Fuca2 protein_coding protein_coding MGP_CBAJ_T0024299.1 MGP_CBAJ_G0016755.1 mouse_genomes_project 10 11638284 11656154 + MGP_CBAJ_P0024299 Fuca2 protein_coding protein_coding MGP_CBAJ_T0024300.1 MGP_CBAJ_G0016755.1 mouse_genomes_project 10 11638284 11659648 + MGP_CBAJ_P0024300 Fuca2 protein_coding protein_coding MGP_CBAJ_T0024301.1 MGP_CBAJ_G0016755.1 mouse_genomes_project 10 11638367 11653709 + Fuca2 protein_coding retained_intron MGP_CBAJ_T0024302.1 MGP_CBAJ_G0016755.1 mouse_genomes_project 10 11644189 11656109 + Fuca2 protein_coding processed_transcript MGP_CBAJ_T0009515.1 MGP_CBAJ_G0007653.1 mouse_genomes_project 10 135929064 135929149 - Mirlet7i miRNA miRNA MGP_CBAJ_T0027095.1 MGP_CBAJ_G0017564.1 mouse_genomes_project 10 141283790 141292620 + MGP_CBAJ_P0027095 Tac2 protein_coding protein_coding MGP_CBAJ_T0027096.1 MGP_CBAJ_G0017564.1 mouse_genomes_project 10 141284704 141292620 + MGP_CBAJ_P0027096 Tac2 protein_coding protein_coding MGP_CBAJ_T0026089.1 MGP_CBAJ_G0017279.1 mouse_genomes_project 10 88056602 88079280 + MGP_CBAJ_P0026089 Zfr2 protein_coding protein_coding MGP_CBAJ_T0026090.1 MGP_CBAJ_G0017279.1 mouse_genomes_project 10 88056602 88061001 + MGP_CBAJ_P0026090 Zfr2 protein_coding protein_coding MGP_CBAJ_T0026091.1 MGP_CBAJ_G0017279.1 mouse_genomes_project 10 88056623 88061025 + Zfr2 protein_coding processed_transcript MGP_CBAJ_T0026092.1 MGP_CBAJ_G0017279.1 mouse_genomes_project 10 88056623 88069579 + Zfr2 protein_coding retained_intron MGP_CBAJ_T0026093.1 MGP_CBAJ_G0017279.1 mouse_genomes_project 10 88056634 88079278 + Zfr2 protein_coding retained_intron MGP_CBAJ_T0026094.1 MGP_CBAJ_G0017279.1 mouse_genomes_project 10 88075572 88078869 + MGP_CBAJ_P0026094 Zfr2 protein_coding protein_coding MGP_CBAJ_T0026095.1 MGP_CBAJ_G0017279.1 mouse_genomes_project 10 88076207 88077703 + Zfr2 protein_coding retained_intron MGP_CBAJ_T0101523.1 MGP_CBAJ_G0039555.1 mouse_genomes_project 10 143267590 143270042 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0002983.1 MGP_CBAJ_G0002789.1 mouse_genomes_project 10 86423035 86423533 - Gm17134 antisense antisense MGP_CBAJ_T0098646.1 MGP_CBAJ_G0036901.1 mouse_genomes_project 10 99269623 99269726 + Gm25390 snRNA snRNA MGP_CBAJ_T0025606.1 MGP_CBAJ_G0017135.1 mouse_genomes_project 10 83882888 83883998 - MGP_CBAJ_P0025606 Gm19402 protein_coding protein_coding MGP_CBAJ_T0025956.1 MGP_CBAJ_G0017237.1 mouse_genomes_project 10 87055624 87059394 - Uqcr11 protein_coding processed_transcript MGP_CBAJ_T0025957.1 MGP_CBAJ_G0017237.1 mouse_genomes_project 10 87055624 87059458 - MGP_CBAJ_P0025957 Uqcr11 protein_coding protein_coding MGP_CBAJ_T0025958.1 MGP_CBAJ_G0017237.1 mouse_genomes_project 10 87055625 87059423 - Uqcr11 protein_coding processed_transcript MGP_CBAJ_T0025250.1 MGP_CBAJ_G0017065.1 mouse_genomes_project 10 74232991 74334299 + MGP_CBAJ_P0025250 Rhobtb1 protein_coding protein_coding MGP_CBAJ_T0025251.1 MGP_CBAJ_G0017065.1 mouse_genomes_project 10 74290582 74387713 + MGP_CBAJ_P0025251 Rhobtb1 protein_coding protein_coding MGP_CBAJ_T0025253.1 MGP_CBAJ_G0017065.1 mouse_genomes_project 10 74294574 74389605 + MGP_CBAJ_P0025253 Rhobtb1 protein_coding protein_coding MGP_CBAJ_T0025254.1 MGP_CBAJ_G0017065.1 mouse_genomes_project 10 74294597 74371419 + Rhobtb1 protein_coding retained_intron MGP_CBAJ_T0025255.1 MGP_CBAJ_G0017065.1 mouse_genomes_project 10 74294616 74387811 + MGP_CBAJ_P0025255 Rhobtb1 protein_coding protein_coding MGP_CBAJ_T0025256.1 MGP_CBAJ_G0017065.1 mouse_genomes_project 10 74295024 74360840 + MGP_CBAJ_P0025256 Rhobtb1 protein_coding protein_coding MGP_CBAJ_T0025257.1 MGP_CBAJ_G0017065.1 mouse_genomes_project 10 74295111 74334309 + MGP_CBAJ_P0025257 Rhobtb1 protein_coding protein_coding MGP_CBAJ_T0025258.1 MGP_CBAJ_G0017065.1 mouse_genomes_project 10 74295134 74389594 + MGP_CBAJ_P0025258 Rhobtb1 protein_coding protein_coding MGP_CBAJ_T0025259.1 MGP_CBAJ_G0017065.1 mouse_genomes_project 10 74297242 74387523 + MGP_CBAJ_P0025259 Rhobtb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025260.1 MGP_CBAJ_G0017065.1 mouse_genomes_project 10 74306669 74334314 + MGP_CBAJ_P0025260 Rhobtb1 protein_coding protein_coding MGP_CBAJ_T0025261.1 MGP_CBAJ_G0017065.1 mouse_genomes_project 10 74360286 74368101 + Rhobtb1 protein_coding processed_transcript MGP_CBAJ_T0025262.1 MGP_CBAJ_G0017065.1 mouse_genomes_project 10 74377157 74387811 + MGP_CBAJ_P0025262 Rhobtb1 protein_coding protein_coding MGP_CBAJ_T0025263.1 MGP_CBAJ_G0017065.1 mouse_genomes_project 10 74377270 74384720 + Rhobtb1 protein_coding processed_transcript MGP_CBAJ_T0025009.1 MGP_CBAJ_G0017001.1 mouse_genomes_project 10 63892606 64313619 - MGP_CBAJ_P0025009 Cdh23 protein_coding protein_coding MGP_CBAJ_T0025010.1 MGP_CBAJ_G0017001.1 mouse_genomes_project 10 63892606 64313619 - MGP_CBAJ_P0025010 Cdh23 protein_coding protein_coding MGP_CBAJ_T0025011.1 MGP_CBAJ_G0017001.1 mouse_genomes_project 10 63892608 64355195 - MGP_CBAJ_P0025011 Cdh23 protein_coding protein_coding MGP_CBAJ_T0025012.1 MGP_CBAJ_G0017001.1 mouse_genomes_project 10 63892608 64355195 - MGP_CBAJ_P0025012 Cdh23 protein_coding protein_coding MGP_CBAJ_T0025013.1 MGP_CBAJ_G0017001.1 mouse_genomes_project 10 63892608 64355195 - MGP_CBAJ_P0025013 Cdh23 protein_coding protein_coding MGP_CBAJ_T0025014.1 MGP_CBAJ_G0017001.1 mouse_genomes_project 10 63893060 63942002 - MGP_CBAJ_P0025014 Cdh23 protein_coding unknown_likely_coding MGP_CBAJ_T0025015.1 MGP_CBAJ_G0017001.1 mouse_genomes_project 10 63893143 63914110 - Cdh23 protein_coding processed_transcript MGP_CBAJ_T0025016.1 MGP_CBAJ_G0017001.1 mouse_genomes_project 10 63893143 63914110 - Cdh23 protein_coding processed_transcript MGP_CBAJ_T0025017.1 MGP_CBAJ_G0017001.1 mouse_genomes_project 10 63893168 64313619 - Cdh23 protein_coding retained_intron MGP_CBAJ_T0025018.1 MGP_CBAJ_G0017001.1 mouse_genomes_project 10 63893168 64313619 - Cdh23 protein_coding retained_intron MGP_CBAJ_T0025019.1 MGP_CBAJ_G0017001.1 mouse_genomes_project 10 63893221 63895523 - Cdh23 protein_coding retained_intron MGP_CBAJ_T0025026.1 MGP_CBAJ_G0017001.1 mouse_genomes_project 10 63974120 63985706 - Cdh23 protein_coding retained_intron MGP_CBAJ_T0025027.1 MGP_CBAJ_G0017001.1 mouse_genomes_project 10 63975442 64005106 - Cdh23 protein_coding processed_transcript MGP_CBAJ_T0025028.1 MGP_CBAJ_G0017001.1 mouse_genomes_project 10 63975536 63978863 - Cdh23 protein_coding processed_transcript MGP_CBAJ_T0025030.1 MGP_CBAJ_G0017001.1 mouse_genomes_project 10 64222161 64355195 - Cdh23 protein_coding processed_transcript MGP_CBAJ_T0025031.1 MGP_CBAJ_G0017001.1 mouse_genomes_project 10 64281487 64309319 - Cdh23 protein_coding processed_transcript MGP_CBAJ_T0025032.1 MGP_CBAJ_G0017001.1 mouse_genomes_project 10 64313551 64345962 - Cdh23 protein_coding processed_transcript MGP_CBAJ_T0024322.1 MGP_CBAJ_G0016760.1 mouse_genomes_project 10 12640507 12806653 - MGP_CBAJ_P0024322 Adgrg6 protein_coding protein_coding MGP_CBAJ_T0024538.1 MGP_CBAJ_G0016839.1 mouse_genomes_project 10 27115552 27124031 - Lama2 protein_coding retained_intron MGP_CBAJ_T0024539.1 MGP_CBAJ_G0016839.1 mouse_genomes_project 10 27116801 27812716 - MGP_CBAJ_P0024539 Lama2 protein_coding protein_coding MGP_CBAJ_T0024540.1 MGP_CBAJ_G0016839.1 mouse_genomes_project 10 27117011 27812669 - MGP_CBAJ_P0024540 Lama2 protein_coding unknown_likely_coding MGP_CBAJ_T0024541.1 MGP_CBAJ_G0016839.1 mouse_genomes_project 10 27340023 27812669 - MGP_CBAJ_P0024541 Lama2 protein_coding protein_coding MGP_CBAJ_T0024542.1 MGP_CBAJ_G0016839.1 mouse_genomes_project 10 27425481 27812815 - Lama2 protein_coding retained_intron MGP_CBAJ_T0024543.1 MGP_CBAJ_G0016839.1 mouse_genomes_project 10 27521890 27812739 - Lama2 protein_coding retained_intron MGP_CBAJ_T0024544.1 MGP_CBAJ_G0016839.1 mouse_genomes_project 10 27609502 27815651 - Lama2 protein_coding retained_intron MGP_CBAJ_T0024545.1 MGP_CBAJ_G0016839.1 mouse_genomes_project 10 27659626 27812739 - Lama2 protein_coding processed_transcript MGP_CBAJ_T0002988.1 MGP_CBAJ_G0002794.1 mouse_genomes_project 10 87802879 87804341 + Gm16099 antisense antisense MGP_CBAJ_T0002989.1 MGP_CBAJ_G0002794.1 mouse_genomes_project 10 87803151 87804635 + Gm16099 antisense antisense MGP_CBAJ_T0024452.1 MGP_CBAJ_G0016799.1 mouse_genomes_project 10 21689962 21715030 + MGP_CBAJ_P0024452 protein_coding protein_coding MGP_CBAJ_T0024454.1 MGP_CBAJ_G0016799.1 mouse_genomes_project 10 21692659 21715030 + MGP_CBAJ_P0024454 protein_coding protein_coding MGP_CBAJ_T0025324.1 MGP_CBAJ_G0017072.1 mouse_genomes_project 10 75871955 75915641 - MGP_CBAJ_P0025324 Phyhipl protein_coding protein_coding MGP_CBAJ_T0025325.1 MGP_CBAJ_G0017072.1 mouse_genomes_project 10 75872947 75975452 - MGP_CBAJ_P0025325 Phyhipl protein_coding protein_coding MGP_CBAJ_T0025326.1 MGP_CBAJ_G0017072.1 mouse_genomes_project 10 75877110 75915616 - Phyhipl protein_coding retained_intron MGP_CBAJ_T0025327.1 MGP_CBAJ_G0017072.1 mouse_genomes_project 10 75881066 75915824 - Phyhipl protein_coding retained_intron MGP_CBAJ_T0025328.1 MGP_CBAJ_G0017072.1 mouse_genomes_project 10 75884253 75975459 - MGP_CBAJ_P0025328 Phyhipl protein_coding protein_coding MGP_CBAJ_T0025329.1 MGP_CBAJ_G0017072.1 mouse_genomes_project 10 75917582 75971422 - Phyhipl protein_coding processed_transcript MGP_CBAJ_T0025330.1 MGP_CBAJ_G0017072.1 mouse_genomes_project 10 75917666 75975457 - Phyhipl protein_coding processed_transcript MGP_CBAJ_T0025331.1 MGP_CBAJ_G0017072.1 mouse_genomes_project 10 75923619 75924094 - Phyhipl protein_coding processed_transcript MGP_CBAJ_T0025332.1 MGP_CBAJ_G0017072.1 mouse_genomes_project 10 75924129 75942899 - Phyhipl protein_coding processed_transcript MGP_CBAJ_T0002973.1 MGP_CBAJ_G0002780.1 mouse_genomes_project 10 75540311 75541025 - Gm7097 antisense antisense MGP_CBAJ_T0026309.1 MGP_CBAJ_G0017325.1 mouse_genomes_project 10 91820098 91897067 - MGP_CBAJ_P0026309 Nuak1 protein_coding protein_coding MGP_CBAJ_T0026310.1 MGP_CBAJ_G0017325.1 mouse_genomes_project 10 91824489 91843603 - MGP_CBAJ_P0026310 Nuak1 protein_coding protein_coding MGP_CBAJ_T0016842.1 MGP_CBAJ_G0014870.1 mouse_genomes_project 10 19568347 19574722 - processed_transcript processed_transcript MGP_CBAJ_T0026658.1 MGP_CBAJ_G0017421.1 mouse_genomes_project 10 108665813 108670065 + MGP_CBAJ_P0026658 Dusp6 protein_coding protein_coding MGP_CBAJ_T0098609.1 MGP_CBAJ_G0036864.1 mouse_genomes_project 10 22677543 22677650 - Gm24655 snRNA snRNA MGP_CBAJ_T0025812.1 MGP_CBAJ_G0017209.1 mouse_genomes_project 10 86551474 86557950 + MGP_CBAJ_P0025812 Grin3b protein_coding protein_coding MGP_CBAJ_T0025813.1 MGP_CBAJ_G0017209.1 mouse_genomes_project 10 86554496 86557475 + MGP_CBAJ_P0025813 Grin3b protein_coding protein_coding MGP_CBAJ_T0025814.1 MGP_CBAJ_G0017209.1 mouse_genomes_project 10 86555168 86557884 + MGP_CBAJ_P0025814 Grin3b protein_coding protein_coding MGP_CBAJ_T0027172.1 MGP_CBAJ_G0017593.1 mouse_genomes_project 10 142118403 142125339 - MGP_CBAJ_P0027172 Coq10a protein_coding protein_coding MGP_CBAJ_T0026727.1 MGP_CBAJ_G0017446.1 mouse_genomes_project 10 118225369 118395182 - MGP_CBAJ_P0026727 Otogl protein_coding protein_coding MGP_CBAJ_T0027283.1 MGP_CBAJ_G0017647.1 mouse_genomes_project 10 143534233 143538195 + MGP_CBAJ_P0027283 Olfr794 protein_coding protein_coding MGP_CBAJ_T0027284.1 MGP_CBAJ_G0017647.1 mouse_genomes_project 10 143537232 143538195 + MGP_CBAJ_P0027284 Olfr794 protein_coding protein_coding MGP_CBAJ_T0006039.1 MGP_CBAJ_G0005047.1 mouse_genomes_project 10 100475901 100512214 - Rmst lincRNA lincRNA MGP_CBAJ_T0006040.1 MGP_CBAJ_G0005047.1 mouse_genomes_project 10 100475907 100476582 - Rmst lincRNA lincRNA MGP_CBAJ_T0006041.1 MGP_CBAJ_G0005047.1 mouse_genomes_project 10 100475995 100512067 - Rmst lincRNA lincRNA MGP_CBAJ_T0006042.1 MGP_CBAJ_G0005047.1 mouse_genomes_project 10 100480085 100480592 - Rmst lincRNA lincRNA MGP_CBAJ_T0006043.1 MGP_CBAJ_G0005047.1 mouse_genomes_project 10 100486686 100574740 - Rmst lincRNA lincRNA MGP_CBAJ_T0006044.1 MGP_CBAJ_G0005047.1 mouse_genomes_project 10 100486686 100575146 - Rmst lincRNA lincRNA MGP_CBAJ_T0006045.1 MGP_CBAJ_G0005047.1 mouse_genomes_project 10 100488827 100574658 - Rmst lincRNA lincRNA MGP_CBAJ_T0006046.1 MGP_CBAJ_G0005047.1 mouse_genomes_project 10 100543199 100575143 - Rmst lincRNA lincRNA MGP_CBAJ_T0006047.1 MGP_CBAJ_G0005047.1 mouse_genomes_project 10 100544910 100546273 - Rmst lincRNA lincRNA MGP_CBAJ_T0006048.1 MGP_CBAJ_G0005047.1 mouse_genomes_project 10 100544930 100573155 - Rmst lincRNA lincRNA MGP_CBAJ_T0006049.1 MGP_CBAJ_G0005047.1 mouse_genomes_project 10 100544956 100574947 - Rmst lincRNA lincRNA MGP_CBAJ_T0006051.1 MGP_CBAJ_G0005047.1 mouse_genomes_project 10 100572115 100572175 - Rmst lincRNA misc_RNA MGP_CBAJ_T0006052.1 MGP_CBAJ_G0005047.1 mouse_genomes_project 10 100572115 100572773 - Rmst lincRNA lincRNA MGP_CBAJ_T0006053.1 MGP_CBAJ_G0005047.1 mouse_genomes_project 10 100572158 100575146 - Rmst lincRNA lincRNA MGP_CBAJ_T0026645.1 MGP_CBAJ_G0017414.1 mouse_genomes_project 10 106895529 106895844 - MGP_CBAJ_P0026645 Gm10754 protein_coding protein_coding MGP_CBAJ_T0027251.1 MGP_CBAJ_G0017623.1 mouse_genomes_project 10 142806763 142831266 + MGP_CBAJ_P0027251 Itga7 protein_coding protein_coding MGP_CBAJ_T0027252.1 MGP_CBAJ_G0017623.1 mouse_genomes_project 10 142806939 142831279 + MGP_CBAJ_P0027252 Itga7 protein_coding unknown_likely_coding MGP_CBAJ_T0024124.1 MGP_CBAJ_G0016718.1 mouse_genomes_project 10 2889338 2897733 + MGP_CBAJ_P0024124 Vip protein_coding protein_coding MGP_CBAJ_T0025825.1 MGP_CBAJ_G0017213.1 mouse_genomes_project 10 86600491 86618922 + MGP_CBAJ_P0025825 Hmha1 protein_coding protein_coding MGP_CBAJ_T0025826.1 MGP_CBAJ_G0017213.1 mouse_genomes_project 10 86600577 86618919 + Hmha1 protein_coding retained_intron MGP_CBAJ_T0025827.1 MGP_CBAJ_G0017213.1 mouse_genomes_project 10 86600754 86618919 + MGP_CBAJ_P0025827 Hmha1 protein_coding protein_coding MGP_CBAJ_T0025828.1 MGP_CBAJ_G0017213.1 mouse_genomes_project 10 86607084 86618918 + MGP_CBAJ_P0025828 Hmha1 protein_coding protein_coding MGP_CBAJ_T0025829.1 MGP_CBAJ_G0017213.1 mouse_genomes_project 10 86609174 86618912 + Hmha1 protein_coding retained_intron MGP_CBAJ_T0009489.1 MGP_CBAJ_G0007627.1 mouse_genomes_project 10 88101795 88101886 + Mir3057 miRNA miRNA MGP_CBAJ_T0012247.1 MGP_CBAJ_G0010359.1 mouse_genomes_project 10 21424305 21425248 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0025247.1 MGP_CBAJ_G0017063.1 mouse_genomes_project 10 73382950 73511300 - MGP_CBAJ_P0025247 1700040L02Rik protein_coding protein_coding MGP_CBAJ_T0025248.1 MGP_CBAJ_G0017063.1 mouse_genomes_project 10 73390855 73495149 - MGP_CBAJ_P0025248 1700040L02Rik protein_coding protein_coding MGP_CBAJ_T0026559.1 MGP_CBAJ_G0017386.1 mouse_genomes_project 10 102141390 102160326 - MGP_CBAJ_P0026559 Amdhd1 protein_coding protein_coding MGP_CBAJ_T0024123.1 MGP_CBAJ_G0016717.1 mouse_genomes_project 10 2831353 2843767 + MGP_CBAJ_P0024123 Myct1 protein_coding protein_coding MGP_CBAJ_T0025063.1 MGP_CBAJ_G0017012.1 mouse_genomes_project 10 65280331 65288370 + MGP_CBAJ_P0025063 Nodal protein_coding protein_coding MGP_CBAJ_T0025682.1 MGP_CBAJ_G0017167.1 mouse_genomes_project 10 85296846 85332451 + MGP_CBAJ_P0025682 protein_coding protein_coding MGP_CBAJ_T0025683.1 MGP_CBAJ_G0017167.1 mouse_genomes_project 10 85296984 85331315 + MGP_CBAJ_P0025683 protein_coding protein_coding MGP_CBAJ_T0024264.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11132201 11207659 + MGP_CBAJ_P0024264 Plagl1 protein_coding protein_coding MGP_CBAJ_T0024265.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165368 11205165 + Plagl1 protein_coding processed_transcript MGP_CBAJ_T0024266.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165389 11205320 + Plagl1 protein_coding processed_transcript MGP_CBAJ_T0024267.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165465 11205204 + Plagl1 protein_coding processed_transcript MGP_CBAJ_T0024268.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165465 11211825 + MGP_CBAJ_P0024268 Plagl1 protein_coding protein_coding MGP_CBAJ_T0024269.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165509 11191234 + Plagl1 protein_coding processed_transcript MGP_CBAJ_T0024270.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165509 11193749 + Plagl1 protein_coding processed_transcript MGP_CBAJ_T0024271.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165509 11193808 + Plagl1 protein_coding processed_transcript MGP_CBAJ_T0024272.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165509 11193731 + Plagl1 protein_coding processed_transcript MGP_CBAJ_T0024273.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165509 11193791 + Plagl1 protein_coding processed_transcript MGP_CBAJ_T0024274.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165509 11205285 + Plagl1 protein_coding processed_transcript MGP_CBAJ_T0024275.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165509 11185968 + Plagl1 protein_coding processed_transcript MGP_CBAJ_T0024276.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165509 11193747 + Plagl1 protein_coding processed_transcript MGP_CBAJ_T0024277.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165509 11183441 + Plagl1 protein_coding retained_intron MGP_CBAJ_T0024278.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165509 11205222 + Plagl1 protein_coding processed_transcript MGP_CBAJ_T0024279.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165509 11205204 + Plagl1 protein_coding processed_transcript MGP_CBAJ_T0024280.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165509 11189577 + Plagl1 protein_coding processed_transcript MGP_CBAJ_T0024281.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165509 11211229 + MGP_CBAJ_P0024281 Plagl1 protein_coding protein_coding MGP_CBAJ_T0024282.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165512 11211216 + MGP_CBAJ_P0024282 Plagl1 protein_coding protein_coding MGP_CBAJ_T0024283.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165518 11190473 + Plagl1 protein_coding retained_intron MGP_CBAJ_T0024284.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165551 11189813 + Plagl1 protein_coding retained_intron MGP_CBAJ_T0024285.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165551 11189913 + Plagl1 protein_coding retained_intron MGP_CBAJ_T0024286.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11165690 11205335 + MGP_CBAJ_P0024286 Plagl1 protein_coding protein_coding MGP_CBAJ_T0024287.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11190493 11207646 + MGP_CBAJ_P0024287 Plagl1 protein_coding protein_coding MGP_CBAJ_T0024288.1 MGP_CBAJ_G0016751.1 mouse_genomes_project 10 11193390 11205372 + MGP_CBAJ_P0024288 Plagl1 protein_coding protein_coding MGP_CBAJ_T0026248.1 MGP_CBAJ_G0017311.1 mouse_genomes_project 10 89830454 89839691 - MGP_CBAJ_P0026248 protein_coding protein_coding MGP_CBAJ_T0024692.1 MGP_CBAJ_G0016895.1 mouse_genomes_project 10 41838246 41846676 - MGP_CBAJ_P0024692 Gtf3c6 protein_coding protein_coding MGP_CBAJ_T0098644.1 MGP_CBAJ_G0036899.1 mouse_genomes_project 10 97947325 97947432 - Gm26180 snRNA snRNA MGP_CBAJ_T0024683.1 MGP_CBAJ_G0016892.1 mouse_genomes_project 10 41551969 41580136 - MGP_CBAJ_P0024683 Mfsd4b1 protein_coding protein_coding MGP_CBAJ_T0024684.1 MGP_CBAJ_G0016892.1 mouse_genomes_project 10 41561198 41580027 - Mfsd4b1 protein_coding processed_transcript MGP_CBAJ_T0026242.1 MGP_CBAJ_G0017307.1 mouse_genomes_project 10 89233380 89262389 + MGP_CBAJ_P0026242 AU041133 protein_coding protein_coding MGP_CBAJ_T0026243.1 MGP_CBAJ_G0017307.1 mouse_genomes_project 10 89243621 89261335 + MGP_CBAJ_P0026243 AU041133 protein_coding protein_coding MGP_CBAJ_T0009521.1 MGP_CBAJ_G0007659.1 mouse_genomes_project 10 141755983 141756061 + Mir677 miRNA miRNA MGP_CBAJ_T0025359.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 78684727 80094894 + Pcdh15 protein_coding retained_intron MGP_CBAJ_T0025360.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 78684820 79409949 + Pcdh15 protein_coding retained_intron MGP_CBAJ_T0025361.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 78684838 79139845 + Pcdh15 protein_coding retained_intron MGP_CBAJ_T0025362.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543642 80448823 + MGP_CBAJ_P0025362 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025363.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543642 80458429 + MGP_CBAJ_P0025363 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025364.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80460530 + MGP_CBAJ_P0025364 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025365.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80446722 + MGP_CBAJ_P0025365 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025366.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80458779 + MGP_CBAJ_P0025366 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025367.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80458779 + MGP_CBAJ_P0025367 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025368.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80446722 + MGP_CBAJ_P0025368 Pcdh15 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025369.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80446722 + MGP_CBAJ_P0025369 Pcdh15 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025370.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80463794 + MGP_CBAJ_P0025370 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025371.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80460366 + MGP_CBAJ_P0025371 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025372.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80446722 + MGP_CBAJ_P0025372 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025373.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80458779 + MGP_CBAJ_P0025373 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025374.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80446722 + MGP_CBAJ_P0025374 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025375.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80446594 + MGP_CBAJ_P0025375 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025376.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80446722 + MGP_CBAJ_P0025376 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025377.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80458779 + MGP_CBAJ_P0025377 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025378.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80458779 + MGP_CBAJ_P0025378 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025379.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80446722 + MGP_CBAJ_P0025379 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025380.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80447656 + MGP_CBAJ_P0025380 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025381.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80446722 + MGP_CBAJ_P0025381 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025382.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80446722 + MGP_CBAJ_P0025382 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025383.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80460366 + MGP_CBAJ_P0025383 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025384.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80458779 + MGP_CBAJ_P0025384 Pcdh15 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025385.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80458779 + MGP_CBAJ_P0025385 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025386.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543658 80458779 + MGP_CBAJ_P0025386 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025387.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543718 80313817 + MGP_CBAJ_P0025387 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025388.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543718 80313817 + MGP_CBAJ_P0025388 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025389.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79543718 80313817 + MGP_CBAJ_P0025389 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025390.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79680063 80460124 + MGP_CBAJ_P0025390 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025391.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79680063 80460220 + MGP_CBAJ_P0025391 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025392.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 79680063 80458270 + MGP_CBAJ_P0025392 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025393.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 80081047 80111270 + Pcdh15 protein_coding processed_transcript MGP_CBAJ_T0025394.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 80138363 80446725 + MGP_CBAJ_P0025394 Pcdh15 protein_coding protein_coding MGP_CBAJ_T0025395.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 80176226 80186857 + Pcdh15 protein_coding retained_intron MGP_CBAJ_T0025396.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 80393406 80438674 + Pcdh15 protein_coding retained_intron MGP_CBAJ_T0025397.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 80444969 80460266 + Pcdh15 protein_coding processed_transcript MGP_CBAJ_T0025398.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 80445466 80450738 + Pcdh15 protein_coding retained_intron MGP_CBAJ_T0025399.1 MGP_CBAJ_G0017080.1 mouse_genomes_project 10 80445891 80456416 + Pcdh15 protein_coding processed_transcript MGP_CBAJ_T0024905.1 MGP_CBAJ_G0016970.1 mouse_genomes_project 10 61093091 61120060 + MGP_CBAJ_P0024905 Hsf2 protein_coding protein_coding MGP_CBAJ_T0025539.1 MGP_CBAJ_G0017122.1 mouse_genomes_project 10 82801673 82821910 - MGP_CBAJ_P0025539 Col6a1 protein_coding protein_coding MGP_CBAJ_T0025540.1 MGP_CBAJ_G0017122.1 mouse_genomes_project 10 82807897 82812117 - Col6a1 protein_coding retained_intron MGP_CBAJ_T0024686.1 MGP_CBAJ_G0016894.1 mouse_genomes_project 10 41810943 41836046 - MGP_CBAJ_P0024686 Rpf2 protein_coding protein_coding MGP_CBAJ_T0024687.1 MGP_CBAJ_G0016894.1 mouse_genomes_project 10 41811124 41836080 - MGP_CBAJ_P0024687 Rpf2 protein_coding protein_coding MGP_CBAJ_T0024688.1 MGP_CBAJ_G0016894.1 mouse_genomes_project 10 41811380 41815496 - Rpf2 protein_coding processed_transcript MGP_CBAJ_T0024689.1 MGP_CBAJ_G0016894.1 mouse_genomes_project 10 41811510 41836047 - MGP_CBAJ_P0024689 Rpf2 protein_coding protein_coding MGP_CBAJ_T0024690.1 MGP_CBAJ_G0016894.1 mouse_genomes_project 10 41811585 41836071 - MGP_CBAJ_P0024690 Rpf2 protein_coding protein_coding MGP_CBAJ_T0024691.1 MGP_CBAJ_G0016894.1 mouse_genomes_project 10 41813037 41836037 - MGP_CBAJ_P0024691 Rpf2 protein_coding protein_coding MGP_CBAJ_T0027311.1 MGP_CBAJ_G0017666.1 mouse_genomes_project 10 143984153 143985110 - MGP_CBAJ_P0027311 Olfr818 protein_coding protein_coding MGP_CBAJ_T0027312.1 MGP_CBAJ_G0017666.1 mouse_genomes_project 10 143984395 143988611 - MGP_CBAJ_P0027312 Olfr818 protein_coding protein_coding MGP_CBAJ_T0009482.1 MGP_CBAJ_G0007620.1 mouse_genomes_project 10 86419107 86419173 + Mir6910 miRNA miRNA MGP_CBAJ_T0024121.1 MGP_CBAJ_G0016716.1 mouse_genomes_project 10 2231186 2233970 + MGP_CBAJ_P0024121 Gm10097 protein_coding protein_coding MGP_CBAJ_T0024387.1 MGP_CBAJ_G0016783.1 mouse_genomes_project 10 18838044 18887975 - MGP_CBAJ_P0024387 Pex7 protein_coding protein_coding MGP_CBAJ_T0024388.1 MGP_CBAJ_G0016783.1 mouse_genomes_project 10 18838212 18887960 - MGP_CBAJ_P0024388 Pex7 protein_coding protein_coding MGP_CBAJ_T0024389.1 MGP_CBAJ_G0016783.1 mouse_genomes_project 10 18838904 18847768 - Pex7 protein_coding retained_intron MGP_CBAJ_T0024390.1 MGP_CBAJ_G0016783.1 mouse_genomes_project 10 18865066 18887831 - MGP_CBAJ_P0024390 Pex7 protein_coding protein_coding MGP_CBAJ_T0026246.1 MGP_CBAJ_G0017309.1 mouse_genomes_project 10 89521835 89526688 + MGP_CBAJ_P0026246 Gm4924 protein_coding protein_coding MGP_CBAJ_T0024896.1 MGP_CBAJ_G0016965.1 mouse_genomes_project 10 57060798 57250124 - MGP_CBAJ_P0024896 Man1a protein_coding protein_coding MGP_CBAJ_T0024897.1 MGP_CBAJ_G0016965.1 mouse_genomes_project 10 57063025 57250037 - MGP_CBAJ_P0024897 Man1a protein_coding protein_coding MGP_CBAJ_T0024898.1 MGP_CBAJ_G0016965.1 mouse_genomes_project 10 57140359 57250037 - Man1a protein_coding retained_intron MGP_CBAJ_T0024899.1 MGP_CBAJ_G0016965.1 mouse_genomes_project 10 57170305 57250064 - MGP_CBAJ_P0024899 Man1a protein_coding protein_coding MGP_CBAJ_T0024900.1 MGP_CBAJ_G0016965.1 mouse_genomes_project 10 57179907 57250065 - Man1a protein_coding retained_intron MGP_CBAJ_T0099861.1 MGP_CBAJ_G0038116.1 mouse_genomes_project 10 66881730 66881795 - Snord98 snoRNA snoRNA MGP_CBAJ_T0024220.1 MGP_CBAJ_G0016739.1 mouse_genomes_project 10 7371728 7426210 - MGP_CBAJ_P0024220 Samd5 protein_coding protein_coding MGP_CBAJ_T0024822.1 MGP_CBAJ_G0016935.1 mouse_genomes_project 10 46370125 46372356 + MGP_CBAJ_P0024822 protein_coding protein_coding MGP_CBAJ_T0024534.1 MGP_CBAJ_G0016838.1 mouse_genomes_project 10 26852489 26977997 + MGP_CBAJ_P0024534 Arhgap18 protein_coding protein_coding MGP_CBAJ_T0024535.1 MGP_CBAJ_G0016838.1 mouse_genomes_project 10 26873780 27048286 + MGP_CBAJ_P0024535 Arhgap18 protein_coding protein_coding MGP_CBAJ_T0024536.1 MGP_CBAJ_G0016838.1 mouse_genomes_project 10 26933755 26966209 + MGP_CBAJ_P0024536 Arhgap18 protein_coding protein_coding MGP_CBAJ_T0024537.1 MGP_CBAJ_G0016838.1 mouse_genomes_project 10 26980593 27048096 + Arhgap18 protein_coding processed_transcript MGP_CBAJ_T0027255.1 MGP_CBAJ_G0017626.1 mouse_genomes_project 10 142903859 142904889 + MGP_CBAJ_P0027255 Olfr763 protein_coding protein_coding MGP_CBAJ_T0006058.1 MGP_CBAJ_G0005053.1 mouse_genomes_project 10 104704125 104769641 + 4732465J04Rik lincRNA lincRNA MGP_CBAJ_T0006059.1 MGP_CBAJ_G0005053.1 mouse_genomes_project 10 104748883 104770046 + 4732465J04Rik lincRNA lincRNA MGP_CBAJ_T0026550.1 MGP_CBAJ_G0017383.1 mouse_genomes_project 10 101813548 101884692 - MGP_CBAJ_P0026550 Elk3 protein_coding protein_coding MGP_CBAJ_T0026551.1 MGP_CBAJ_G0017383.1 mouse_genomes_project 10 101815432 101884325 - MGP_CBAJ_P0026551 Elk3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026552.1 MGP_CBAJ_G0017383.1 mouse_genomes_project 10 101815432 101884526 - MGP_CBAJ_P0026552 Elk3 protein_coding protein_coding MGP_CBAJ_T0026553.1 MGP_CBAJ_G0017383.1 mouse_genomes_project 10 101851975 101884692 - Elk3 protein_coding retained_intron MGP_CBAJ_T0012263.1 MGP_CBAJ_G0010375.1 mouse_genomes_project 10 45921396 45922401 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002974.1 MGP_CBAJ_G0002781.1 mouse_genomes_project 10 76438123 76438899 + Gm15647 antisense antisense MGP_CBAJ_T0003000.1 MGP_CBAJ_G0002802.1 mouse_genomes_project 10 93637476 93639365 - A230060F14Rik antisense antisense MGP_CBAJ_T0003001.1 MGP_CBAJ_G0002802.1 mouse_genomes_project 10 93638815 93639361 - A230060F14Rik antisense antisense MGP_CBAJ_T0024613.1 MGP_CBAJ_G0016871.1 mouse_genomes_project 10 35035390 35091815 - MGP_CBAJ_P0024613 Dse protein_coding protein_coding MGP_CBAJ_T0027295.1 MGP_CBAJ_G0017654.1 mouse_genomes_project 10 143701251 143703777 + MGP_CBAJ_P0027295 Olfr804 protein_coding protein_coding MGP_CBAJ_T0012267.1 MGP_CBAJ_G0010379.1 mouse_genomes_project 10 55446595 55447030 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099884.1 MGP_CBAJ_G0038139.1 mouse_genomes_project 10 128057895 128058032 + Gm26495 snoRNA snoRNA MGP_CBAJ_T0026776.1 MGP_CBAJ_G0017464.1 mouse_genomes_project 10 124206997 124209652 + MGP_CBAJ_P0026776 Gm26596 protein_coding protein_coding MGP_CBAJ_T0097889.1 MGP_CBAJ_G0036162.1 mouse_genomes_project 10 31157179 31157273 - Gm24189 rRNA rRNA MGP_CBAJ_T0027326.1 MGP_CBAJ_G0017679.1 mouse_genomes_project 10 144705923 144718888 - MGP_CBAJ_P0027326 protein_coding protein_coding MGP_CBAJ_T0025062.1 MGP_CBAJ_G0017011.1 mouse_genomes_project 10 65157168 65223883 - MGP_CBAJ_P0025062 Pald1 protein_coding protein_coding MGP_CBAJ_T0101514.1 MGP_CBAJ_G0039546.1 mouse_genomes_project 10 23634135 23634668 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0025067.1 MGP_CBAJ_G0017016.1 mouse_genomes_project 10 65495257 65539065 + MGP_CBAJ_P0025067 Npffr1 protein_coding protein_coding MGP_CBAJ_T0002976.1 MGP_CBAJ_G0002783.1 mouse_genomes_project 10 81972935 81974237 - Gm16220 antisense antisense MGP_CBAJ_T0024968.1 MGP_CBAJ_G0016992.1 mouse_genomes_project 10 63086657 63086993 + MGP_CBAJ_P0024968 Gm10322 protein_coding protein_coding MGP_CBAJ_T0025983.1 MGP_CBAJ_G0017242.1 mouse_genomes_project 10 87255053 87268052 - MGP_CBAJ_P0025983 Klf16 protein_coding protein_coding MGP_CBAJ_T0002985.1 MGP_CBAJ_G0002791.1 mouse_genomes_project 10 87018655 87019190 + Gm15123 antisense antisense MGP_CBAJ_T0009475.1 MGP_CBAJ_G0007613.1 mouse_genomes_project 10 83818789 83818873 + Mir1930 miRNA miRNA MGP_CBAJ_T0006009.1 MGP_CBAJ_G0005024.1 mouse_genomes_project 10 64779654 64787384 - Gm20610 lincRNA lincRNA MGP_CBAJ_T0024609.1 MGP_CBAJ_G0016867.1 mouse_genomes_project 10 34907792 34986825 + MGP_CBAJ_P0024609 Trappc3l protein_coding protein_coding MGP_CBAJ_T0006029.1 MGP_CBAJ_G0005038.1 mouse_genomes_project 10 88506918 88510342 - Gm26896 lincRNA lincRNA MGP_CBAJ_T0027176.1 MGP_CBAJ_G0017595.1 mouse_genomes_project 10 142153755 142159045 - MGP_CBAJ_P0027176 Slc39a5 protein_coding protein_coding MGP_CBAJ_T0027177.1 MGP_CBAJ_G0017595.1 mouse_genomes_project 10 142153755 142158285 - MGP_CBAJ_P0027177 Slc39a5 protein_coding protein_coding MGP_CBAJ_T0026565.1 MGP_CBAJ_G0017388.1 mouse_genomes_project 10 102206568 102212687 - MGP_CBAJ_P0026565 Snrpf protein_coding unknown_likely_coding MGP_CBAJ_T0024662.1 MGP_CBAJ_G0016886.1 mouse_genomes_project 10 41114957 41164023 + MGP_CBAJ_P0024662 Traf3ip2 protein_coding protein_coding MGP_CBAJ_T0024663.1 MGP_CBAJ_G0016886.1 mouse_genomes_project 10 41143213 41153717 + Traf3ip2 protein_coding retained_intron MGP_CBAJ_T0024664.1 MGP_CBAJ_G0016886.1 mouse_genomes_project 10 41154081 41158879 + Traf3ip2 protein_coding processed_transcript MGP_CBAJ_T0024665.1 MGP_CBAJ_G0016886.1 mouse_genomes_project 10 41154672 41163539 + Traf3ip2 protein_coding retained_intron MGP_CBAJ_T0024666.1 MGP_CBAJ_G0016886.1 mouse_genomes_project 10 41158513 41163541 + Traf3ip2 protein_coding retained_intron MGP_CBAJ_T0011160.1 MGP_CBAJ_G0009298.1 mouse_genomes_project 10 104540173 104540498 + Gm23776 misc_RNA misc_RNA MGP_CBAJ_T0026031.1 MGP_CBAJ_G0017260.1 mouse_genomes_project 10 87590358 87606901 + MGP_CBAJ_P0026031 Sppl2b protein_coding protein_coding MGP_CBAJ_T0000785.1 MGP_CBAJ_G0000722.1 mouse_genomes_project 10 83087698 83088376 - TEC TEC MGP_CBAJ_T0025959.1 MGP_CBAJ_G0017238.1 mouse_genomes_project 10 87062141 87086349 - MGP_CBAJ_P0025959 Tcf3 protein_coding protein_coding MGP_CBAJ_T0025960.1 MGP_CBAJ_G0017238.1 mouse_genomes_project 10 87062141 87086339 - MGP_CBAJ_P0025960 Tcf3 protein_coding protein_coding MGP_CBAJ_T0025961.1 MGP_CBAJ_G0017238.1 mouse_genomes_project 10 87062174 87086345 - MGP_CBAJ_P0025961 Tcf3 protein_coding protein_coding MGP_CBAJ_T0025962.1 MGP_CBAJ_G0017238.1 mouse_genomes_project 10 87062174 87086349 - MGP_CBAJ_P0025962 Tcf3 protein_coding protein_coding MGP_CBAJ_T0025963.1 MGP_CBAJ_G0017238.1 mouse_genomes_project 10 87062235 87086323 - MGP_CBAJ_P0025963 Tcf3 protein_coding protein_coding MGP_CBAJ_T0025964.1 MGP_CBAJ_G0017238.1 mouse_genomes_project 10 87062235 87086323 - MGP_CBAJ_P0025964 Tcf3 protein_coding protein_coding MGP_CBAJ_T0025965.1 MGP_CBAJ_G0017238.1 mouse_genomes_project 10 87062247 87083712 - MGP_CBAJ_P0025965 Tcf3 protein_coding protein_coding MGP_CBAJ_T0025966.1 MGP_CBAJ_G0017238.1 mouse_genomes_project 10 87062253 87086337 - MGP_CBAJ_P0025966 Tcf3 protein_coding protein_coding MGP_CBAJ_T0025967.1 MGP_CBAJ_G0017238.1 mouse_genomes_project 10 87062253 87086337 - MGP_CBAJ_P0025967 Tcf3 protein_coding protein_coding MGP_CBAJ_T0025968.1 MGP_CBAJ_G0017238.1 mouse_genomes_project 10 87062681 87083685 - MGP_CBAJ_P0025968 Tcf3 protein_coding protein_coding MGP_CBAJ_T0025969.1 MGP_CBAJ_G0017238.1 mouse_genomes_project 10 87062681 87083782 - MGP_CBAJ_P0025969 Tcf3 protein_coding protein_coding MGP_CBAJ_T0025970.1 MGP_CBAJ_G0017238.1 mouse_genomes_project 10 87065254 87068115 - Tcf3 protein_coding processed_transcript MGP_CBAJ_T0025971.1 MGP_CBAJ_G0017238.1 mouse_genomes_project 10 87067870 87068916 - Tcf3 protein_coding retained_intron MGP_CBAJ_T0025972.1 MGP_CBAJ_G0017238.1 mouse_genomes_project 10 87072710 87074488 - MGP_CBAJ_P0025972 Tcf3 protein_coding protein_coding MGP_CBAJ_T0025208.1 MGP_CBAJ_G0017052.1 mouse_genomes_project 10 68283782 68286351 - MGP_CBAJ_P0025208 Gm10118 protein_coding protein_coding MGP_CBAJ_T0026634.1 MGP_CBAJ_G0017405.1 mouse_genomes_project 10 104430973 104463838 + MGP_CBAJ_P0026634 Ube2n protein_coding protein_coding MGP_CBAJ_T0026468.1 MGP_CBAJ_G0017371.1 mouse_genomes_project 10 97666318 97722980 - MGP_CBAJ_P0026468 Slc17a8 protein_coding protein_coding MGP_CBAJ_T0024947.1 MGP_CBAJ_G0016983.1 mouse_genomes_project 10 62060777 62061062 + MGP_CBAJ_P0024947 BB019430 protein_coding protein_coding MGP_CBAJ_T0003006.1 MGP_CBAJ_G0002807.1 mouse_genomes_project 10 94718483 94778693 + Gm16271 antisense antisense MGP_CBAJ_T0024130.1 MGP_CBAJ_G0016721.1 mouse_genomes_project 10 3090908 3209290 - MGP_CBAJ_P0024130 Rgs17 protein_coding protein_coding MGP_CBAJ_T0024131.1 MGP_CBAJ_G0016721.1 mouse_genomes_project 10 3090908 3209276 - MGP_CBAJ_P0024131 Rgs17 protein_coding protein_coding MGP_CBAJ_T0024132.1 MGP_CBAJ_G0016721.1 mouse_genomes_project 10 3097418 3209256 - MGP_CBAJ_P0024132 Rgs17 protein_coding protein_coding MGP_CBAJ_T0024133.1 MGP_CBAJ_G0016721.1 mouse_genomes_project 10 3098342 3209256 - MGP_CBAJ_P0024133 Rgs17 protein_coding protein_coding MGP_CBAJ_T0024563.1 MGP_CBAJ_G0016846.1 mouse_genomes_project 10 29670189 29704953 + MGP_CBAJ_P0024563 Echdc1 protein_coding protein_coding MGP_CBAJ_T0024564.1 MGP_CBAJ_G0016846.1 mouse_genomes_project 10 29670304 29703737 + MGP_CBAJ_P0024564 Echdc1 protein_coding protein_coding MGP_CBAJ_T0024565.1 MGP_CBAJ_G0016846.1 mouse_genomes_project 10 29670523 29706054 + MGP_CBAJ_P0024565 Echdc1 protein_coding protein_coding MGP_CBAJ_T0024566.1 MGP_CBAJ_G0016846.1 mouse_genomes_project 10 29670686 29692028 + Echdc1 protein_coding processed_transcript MGP_CBAJ_T0098654.1 MGP_CBAJ_G0036909.1 mouse_genomes_project 10 120004914 120005020 - Gm23041 snRNA snRNA MGP_CBAJ_T0024961.1 MGP_CBAJ_G0016990.1 mouse_genomes_project 10 62871134 62889545 - MGP_CBAJ_P0024961 Oit3 protein_coding protein_coding MGP_CBAJ_T0024962.1 MGP_CBAJ_G0016990.1 mouse_genomes_project 10 62876183 62878957 - Oit3 protein_coding retained_intron MGP_CBAJ_T0025806.1 MGP_CBAJ_G0017207.1 mouse_genomes_project 10 86494177 86528622 + MGP_CBAJ_P0025806 Arid3a protein_coding protein_coding MGP_CBAJ_T0025807.1 MGP_CBAJ_G0017207.1 mouse_genomes_project 10 86494273 86528315 + MGP_CBAJ_P0025807 Arid3a protein_coding protein_coding MGP_CBAJ_T0025808.1 MGP_CBAJ_G0017207.1 mouse_genomes_project 10 86494475 86528307 + MGP_CBAJ_P0025808 Arid3a protein_coding protein_coding MGP_CBAJ_T0025809.1 MGP_CBAJ_G0017207.1 mouse_genomes_project 10 86497413 86498208 + MGP_CBAJ_P0025809 Arid3a protein_coding protein_coding MGP_CBAJ_T0025810.1 MGP_CBAJ_G0017207.1 mouse_genomes_project 10 86516619 86526247 + Arid3a protein_coding processed_transcript MGP_CBAJ_T0026032.1 MGP_CBAJ_G0017261.1 mouse_genomes_project 10 87621581 87641247 + MGP_CBAJ_P0026032 Tmprss9 protein_coding protein_coding MGP_CBAJ_T0009494.1 MGP_CBAJ_G0007632.1 mouse_genomes_project 10 92861530 92861634 + Gm25281 miRNA miRNA MGP_CBAJ_T0025925.1 MGP_CBAJ_G0017230.1 mouse_genomes_project 10 86951256 86953539 - MGP_CBAJ_P0025925 2310011J03Rik protein_coding protein_coding MGP_CBAJ_T0009471.1 MGP_CBAJ_G0007609.1 mouse_genomes_project 10 66200586 66200647 - Mir7662 miRNA miRNA MGP_CBAJ_T0012270.1 MGP_CBAJ_G0010382.1 mouse_genomes_project 10 63183170 63183419 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0025696.1 MGP_CBAJ_G0017176.1 mouse_genomes_project 10 85583565 85604669 + MGP_CBAJ_P0025696 protein_coding protein_coding MGP_CBAJ_T0025338.1 MGP_CBAJ_G0017075.1 mouse_genomes_project 10 76619918 76632395 - MGP_CBAJ_P0025338 Tfam protein_coding protein_coding MGP_CBAJ_T0025339.1 MGP_CBAJ_G0017075.1 mouse_genomes_project 10 76622905 76629775 - Tfam protein_coding processed_transcript MGP_CBAJ_T0025340.1 MGP_CBAJ_G0017075.1 mouse_genomes_project 10 76622916 76632735 - MGP_CBAJ_P0025340 Tfam protein_coding protein_coding MGP_CBAJ_T0025341.1 MGP_CBAJ_G0017075.1 mouse_genomes_project 10 76623575 76631496 - MGP_CBAJ_P0025341 Tfam protein_coding protein_coding MGP_CBAJ_T0009513.1 MGP_CBAJ_G0007651.1 mouse_genomes_project 10 135546372 135546469 + Mir6412 miRNA miRNA MGP_CBAJ_T0012264.1 MGP_CBAJ_G0010376.1 mouse_genomes_project 10 47244500 47245515 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097891.1 MGP_CBAJ_G0036164.1 mouse_genomes_project 10 43150731 43150836 - Gm27783 rRNA rRNA MGP_CBAJ_T0026014.1 MGP_CBAJ_G0017254.1 mouse_genomes_project 10 87522607 87529334 + MGP_CBAJ_P0026014 Sf3a2 protein_coding protein_coding MGP_CBAJ_T0026015.1 MGP_CBAJ_G0017254.1 mouse_genomes_project 10 87523141 87528417 + MGP_CBAJ_P0026015 Sf3a2 protein_coding protein_coding MGP_CBAJ_T0026016.1 MGP_CBAJ_G0017254.1 mouse_genomes_project 10 87523378 87526811 + MGP_CBAJ_P0026016 Sf3a2 protein_coding protein_coding MGP_CBAJ_T0026017.1 MGP_CBAJ_G0017254.1 mouse_genomes_project 10 87526909 87528427 + Sf3a2 protein_coding retained_intron MGP_CBAJ_T0025203.1 MGP_CBAJ_G0017051.1 mouse_genomes_project 10 67706439 69516570 + MGP_CBAJ_P0025203 Ctnna3 protein_coding protein_coding MGP_CBAJ_T0025204.1 MGP_CBAJ_G0017051.1 mouse_genomes_project 10 67736452 69517272 + MGP_CBAJ_P0025204 Ctnna3 protein_coding protein_coding MGP_CBAJ_T0025205.1 MGP_CBAJ_G0017051.1 mouse_genomes_project 10 67789506 69516438 + MGP_CBAJ_P0025205 Ctnna3 protein_coding protein_coding MGP_CBAJ_T0025206.1 MGP_CBAJ_G0017051.1 mouse_genomes_project 10 67873147 67887246 + Ctnna3 protein_coding processed_transcript MGP_CBAJ_T0025207.1 MGP_CBAJ_G0017051.1 mouse_genomes_project 10 68154393 68454999 + Ctnna3 protein_coding processed_transcript MGP_CBAJ_T0026424.1 MGP_CBAJ_G0017361.1 mouse_genomes_project 10 96379956 96405430 - MGP_CBAJ_P0026424 Chpt1 protein_coding protein_coding MGP_CBAJ_T0026425.1 MGP_CBAJ_G0017361.1 mouse_genomes_project 10 96380215 96411322 - MGP_CBAJ_P0026425 Chpt1 protein_coding protein_coding MGP_CBAJ_T0026429.1 MGP_CBAJ_G0017361.1 mouse_genomes_project 10 96398454 96434812 - MGP_CBAJ_P0026429 Chpt1 protein_coding protein_coding MGP_CBAJ_T0026430.1 MGP_CBAJ_G0017361.1 mouse_genomes_project 10 96401408 96434738 - MGP_CBAJ_P0026430 Chpt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026431.1 MGP_CBAJ_G0017361.1 mouse_genomes_project 10 96401806 96434492 - MGP_CBAJ_P0026431 Chpt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026432.1 MGP_CBAJ_G0017361.1 mouse_genomes_project 10 96401806 96434709 - MGP_CBAJ_P0026432 Chpt1 protein_coding protein_coding MGP_CBAJ_T0026433.1 MGP_CBAJ_G0017361.1 mouse_genomes_project 10 96401828 96434628 - MGP_CBAJ_P0026433 Chpt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026434.1 MGP_CBAJ_G0017361.1 mouse_genomes_project 10 96415835 96434657 - MGP_CBAJ_P0026434 Chpt1 protein_coding protein_coding MGP_CBAJ_T0026435.1 MGP_CBAJ_G0017361.1 mouse_genomes_project 10 96417284 96434664 - MGP_CBAJ_P0026435 Chpt1 protein_coding protein_coding MGP_CBAJ_T0012258.1 MGP_CBAJ_G0010370.1 mouse_genomes_project 10 41271209 41271819 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009517.1 MGP_CBAJ_G0007655.1 mouse_genomes_project 10 139350948 139351021 + Gm22183 miRNA miRNA MGP_CBAJ_T0009486.1 MGP_CBAJ_G0007624.1 mouse_genomes_project 10 87563883 87563956 + Mir1982 miRNA miRNA MGP_CBAJ_T0026633.1 MGP_CBAJ_G0017404.1 mouse_genomes_project 10 104380649 104411885 - MGP_CBAJ_P0026633 Mrpl42 protein_coding unknown_likely_coding MGP_CBAJ_T0027317.1 MGP_CBAJ_G0017670.1 mouse_genomes_project 10 144155373 144156315 + MGP_CBAJ_P0027317 Olfr822 protein_coding protein_coding MGP_CBAJ_T0025999.1 MGP_CBAJ_G0017248.1 mouse_genomes_project 10 87379490 87390308 - MGP_CBAJ_P0025999 Mknk2 protein_coding protein_coding MGP_CBAJ_T0026000.1 MGP_CBAJ_G0017248.1 mouse_genomes_project 10 87384094 87386460 - MGP_CBAJ_P0026000 Mknk2 protein_coding protein_coding MGP_CBAJ_T0026001.1 MGP_CBAJ_G0017248.1 mouse_genomes_project 10 87385778 87386420 - MGP_CBAJ_P0026001 Mknk2 protein_coding protein_coding MGP_CBAJ_T0026002.1 MGP_CBAJ_G0017248.1 mouse_genomes_project 10 87386114 87392281 - MGP_CBAJ_P0026002 Mknk2 protein_coding protein_coding MGP_CBAJ_T0024521.1 MGP_CBAJ_G0016832.1 mouse_genomes_project 10 25223202 25416893 + MGP_CBAJ_P0024521 Epb41l2 protein_coding protein_coding MGP_CBAJ_T0024522.1 MGP_CBAJ_G0016832.1 mouse_genomes_project 10 25223345 25379837 + MGP_CBAJ_P0024522 Epb41l2 protein_coding unknown_likely_coding MGP_CBAJ_T0024523.1 MGP_CBAJ_G0016832.1 mouse_genomes_project 10 25280531 25416893 + MGP_CBAJ_P0024523 Epb41l2 protein_coding protein_coding MGP_CBAJ_T0024524.1 MGP_CBAJ_G0016832.1 mouse_genomes_project 10 25381762 25416862 + MGP_CBAJ_P0024524 Epb41l2 protein_coding unknown_likely_coding MGP_CBAJ_T0025820.1 MGP_CBAJ_G0017211.1 mouse_genomes_project 10 86572407 86579898 + MGP_CBAJ_P0025820 Cnn2 protein_coding protein_coding MGP_CBAJ_T0025821.1 MGP_CBAJ_G0017211.1 mouse_genomes_project 10 86572446 86578520 + MGP_CBAJ_P0025821 Cnn2 protein_coding protein_coding MGP_CBAJ_T0101018.1 MGP_CBAJ_G0039257.1 mouse_genomes_project 10 96708122 96709812 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101019.1 MGP_CBAJ_G0039257.1 mouse_genomes_project 10 96709030 96709427 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0025437.1 MGP_CBAJ_G0017090.1 mouse_genomes_project 10 81478867 81489054 - MGP_CBAJ_P0025437 Lrrc75b protein_coding protein_coding MGP_CBAJ_T0099849.1 MGP_CBAJ_G0038104.1 mouse_genomes_project 10 39565460 39565528 + Gm24297 snoRNA snoRNA MGP_CBAJ_T0006033.1 MGP_CBAJ_G0005041.1 mouse_genomes_project 10 92017652 92026430 - Platr7 lincRNA lincRNA MGP_CBAJ_T0002951.1 MGP_CBAJ_G0002764.1 mouse_genomes_project 10 41052604 41087426 - Gm16365 antisense antisense MGP_CBAJ_T0002952.1 MGP_CBAJ_G0002764.1 mouse_genomes_project 10 41054133 41115691 - Gm16365 antisense antisense MGP_CBAJ_T0002953.1 MGP_CBAJ_G0002764.1 mouse_genomes_project 10 41056488 41115695 - Gm16365 antisense antisense MGP_CBAJ_T0002954.1 MGP_CBAJ_G0002764.1 mouse_genomes_project 10 41094770 41115706 - Gm16365 antisense antisense MGP_CBAJ_T0024549.1 MGP_CBAJ_G0016841.1 mouse_genomes_project 10 28944464 29184179 + MGP_CBAJ_P0024549 Themis protein_coding protein_coding MGP_CBAJ_T0024550.1 MGP_CBAJ_G0016841.1 mouse_genomes_project 10 28944464 29084111 + MGP_CBAJ_P0024550 Themis protein_coding protein_coding MGP_CBAJ_T0024551.1 MGP_CBAJ_G0016841.1 mouse_genomes_project 10 28944499 29054920 + Themis protein_coding retained_intron MGP_CBAJ_T0024552.1 MGP_CBAJ_G0016841.1 mouse_genomes_project 10 28944501 29091967 + MGP_CBAJ_P0024552 Themis protein_coding protein_coding MGP_CBAJ_T0024553.1 MGP_CBAJ_G0016841.1 mouse_genomes_project 10 28944731 29184182 + MGP_CBAJ_P0024553 Themis protein_coding nonsense_mediated_decay MGP_CBAJ_T0024554.1 MGP_CBAJ_G0016841.1 mouse_genomes_project 10 28944737 29071826 + MGP_CBAJ_P0024554 Themis protein_coding protein_coding MGP_CBAJ_T0024555.1 MGP_CBAJ_G0016841.1 mouse_genomes_project 10 28944737 29018969 + MGP_CBAJ_P0024555 Themis protein_coding nonsense_mediated_decay MGP_CBAJ_T0097896.1 MGP_CBAJ_G0036169.1 mouse_genomes_project 10 103630196 103630323 - Gm24186 rRNA rRNA MGP_CBAJ_T0026244.1 MGP_CBAJ_G0017308.1 mouse_genomes_project 10 89344233 89361809 - MGP_CBAJ_P0026244 Zfp938 protein_coding protein_coding MGP_CBAJ_T0026245.1 MGP_CBAJ_G0017308.1 mouse_genomes_project 10 89344237 89361816 - MGP_CBAJ_P0026245 Zfp938 protein_coding nonsense_mediated_decay MGP_CBAJ_T0098655.1 MGP_CBAJ_G0036910.1 mouse_genomes_project 10 121761898 121762004 - Gm22236 snRNA snRNA MGP_CBAJ_T0012281.1 MGP_CBAJ_G0010393.1 mouse_genomes_project 10 81911200 81911593 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0026037.1 MGP_CBAJ_G0017264.1 mouse_genomes_project 10 87676923 87679037 + MGP_CBAJ_P0026037 Gadd45b protein_coding protein_coding MGP_CBAJ_T0025196.1 MGP_CBAJ_G0017048.1 mouse_genomes_project 10 67573671 67591497 - MGP_CBAJ_P0025196 Sirt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025197.1 MGP_CBAJ_G0017048.1 mouse_genomes_project 10 67573674 67597027 - MGP_CBAJ_P0025197 Sirt1 protein_coding protein_coding MGP_CBAJ_T0025198.1 MGP_CBAJ_G0017048.1 mouse_genomes_project 10 67576811 67580295 - Sirt1 protein_coding retained_intron MGP_CBAJ_T0025199.1 MGP_CBAJ_G0017048.1 mouse_genomes_project 10 67586058 67591497 - Sirt1 protein_coding retained_intron MGP_CBAJ_T0009490.1 MGP_CBAJ_G0007628.1 mouse_genomes_project 10 88233992 88234058 + Mir6913 miRNA miRNA MGP_CBAJ_T0025153.1 MGP_CBAJ_G0017037.1 mouse_genomes_project 10 66743417 66823452 - MGP_CBAJ_P0025153 Stox1 protein_coding protein_coding MGP_CBAJ_T0025154.1 MGP_CBAJ_G0017037.1 mouse_genomes_project 10 66743417 66823125 - MGP_CBAJ_P0025154 Stox1 protein_coding protein_coding MGP_CBAJ_T0025155.1 MGP_CBAJ_G0017037.1 mouse_genomes_project 10 66750449 66823125 - MGP_CBAJ_P0025155 Stox1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0098635.1 MGP_CBAJ_G0036890.1 mouse_genomes_project 10 86242271 86242378 - Gm25794 snRNA snRNA MGP_CBAJ_T0025974.1 MGP_CBAJ_G0017240.1 mouse_genomes_project 10 87191972 87218620 - MGP_CBAJ_P0025974 Atp8b3 protein_coding protein_coding MGP_CBAJ_T0012290.1 MGP_CBAJ_G0010402.1 mouse_genomes_project 10 105558450 105559359 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0026968.1 MGP_CBAJ_G0017529.1 mouse_genomes_project 10 140389413 140416189 + MGP_CBAJ_P0026968 Ctdsp2 protein_coding protein_coding MGP_CBAJ_T0026969.1 MGP_CBAJ_G0017529.1 mouse_genomes_project 10 140389934 140410036 + MGP_CBAJ_P0026969 Ctdsp2 protein_coding unknown_likely_coding MGP_CBAJ_T0026970.1 MGP_CBAJ_G0017529.1 mouse_genomes_project 10 140406293 140416189 + MGP_CBAJ_P0026970 Ctdsp2 protein_coding protein_coding MGP_CBAJ_T0026682.1 MGP_CBAJ_G0017431.1 mouse_genomes_project 10 111269506 111691778 + Mgat4c protein_coding retained_intron MGP_CBAJ_T0026683.1 MGP_CBAJ_G0017431.1 mouse_genomes_project 10 111269506 112141187 + MGP_CBAJ_P0026683 Mgat4c protein_coding protein_coding MGP_CBAJ_T0026684.1 MGP_CBAJ_G0017431.1 mouse_genomes_project 10 111269660 112125138 + Mgat4c protein_coding processed_transcript MGP_CBAJ_T0026685.1 MGP_CBAJ_G0017431.1 mouse_genomes_project 10 111269660 112125652 + MGP_CBAJ_P0026685 Mgat4c protein_coding protein_coding MGP_CBAJ_T0026686.1 MGP_CBAJ_G0017431.1 mouse_genomes_project 10 111269765 112134824 + MGP_CBAJ_P0026686 Mgat4c protein_coding protein_coding MGP_CBAJ_T0026687.1 MGP_CBAJ_G0017431.1 mouse_genomes_project 10 111866425 112138097 + MGP_CBAJ_P0026687 Mgat4c protein_coding protein_coding MGP_CBAJ_T0026688.1 MGP_CBAJ_G0017431.1 mouse_genomes_project 10 111866425 112141190 + MGP_CBAJ_P0026688 Mgat4c protein_coding protein_coding MGP_CBAJ_T0026689.1 MGP_CBAJ_G0017431.1 mouse_genomes_project 10 111866445 111994422 + Mgat4c protein_coding processed_transcript MGP_CBAJ_T0026690.1 MGP_CBAJ_G0017431.1 mouse_genomes_project 10 111866456 112125579 + MGP_CBAJ_P0026690 Mgat4c protein_coding protein_coding MGP_CBAJ_T0026691.1 MGP_CBAJ_G0017431.1 mouse_genomes_project 10 111866472 111994423 + Mgat4c protein_coding processed_transcript MGP_CBAJ_T0026692.1 MGP_CBAJ_G0017431.1 mouse_genomes_project 10 111866646 112141190 + MGP_CBAJ_P0026692 Mgat4c protein_coding protein_coding MGP_CBAJ_T0026693.1 MGP_CBAJ_G0017431.1 mouse_genomes_project 10 112121924 112140034 + MGP_CBAJ_P0026693 Mgat4c protein_coding protein_coding MGP_CBAJ_T0012302.1 MGP_CBAJ_G0010414.1 mouse_genomes_project 10 140790546 140791546 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0024263.1 MGP_CBAJ_G0016750.1 mouse_genomes_project 10 11058264 11062093 + MGP_CBAJ_P0024263 Sf3b5 protein_coding protein_coding MGP_CBAJ_T0024512.1 MGP_CBAJ_G0016830.1 mouse_genomes_project 10 24690895 24706317 - MGP_CBAJ_P0024512 Arg1 protein_coding protein_coding MGP_CBAJ_T0026629.1 MGP_CBAJ_G0017403.1 mouse_genomes_project 10 104308753 104311060 - MGP_CBAJ_P0026629 protein_coding protein_coding MGP_CBAJ_T0006038.1 MGP_CBAJ_G0005046.1 mouse_genomes_project 10 99454774 99455854 + Gm26765 lincRNA lincRNA MGP_CBAJ_T0026139.1 MGP_CBAJ_G0017290.1 mouse_genomes_project 10 88208441 88210229 - MGP_CBAJ_P0026139 4930404N11Rik protein_coding protein_coding MGP_CBAJ_T0026140.1 MGP_CBAJ_G0017290.1 mouse_genomes_project 10 88209297 88210251 - 4930404N11Rik protein_coding retained_intron MGP_CBAJ_T0026141.1 MGP_CBAJ_G0017290.1 mouse_genomes_project 10 88209398 88211191 - MGP_CBAJ_P0026141 4930404N11Rik protein_coding protein_coding MGP_CBAJ_T0026142.1 MGP_CBAJ_G0017290.1 mouse_genomes_project 10 88209421 88211165 - 4930404N11Rik protein_coding retained_intron MGP_CBAJ_T0002938.1 MGP_CBAJ_G0002753.1 mouse_genomes_project 10 5278013 5279100 + B430219N15Rik antisense antisense MGP_CBAJ_T0002939.1 MGP_CBAJ_G0002753.1 mouse_genomes_project 10 5278078 5279171 + B430219N15Rik antisense antisense MGP_CBAJ_T0009507.1 MGP_CBAJ_G0007645.1 mouse_genomes_project 10 117891311 117891440 + Gm44403 miRNA miRNA MGP_CBAJ_T0024755.1 MGP_CBAJ_G0016915.1 mouse_genomes_project 10 43609787 43724460 + MGP_CBAJ_P0024755 Sesn1 protein_coding protein_coding MGP_CBAJ_T0024756.1 MGP_CBAJ_G0016915.1 mouse_genomes_project 10 43690082 43724460 + MGP_CBAJ_P0024756 Sesn1 protein_coding protein_coding MGP_CBAJ_T0024135.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4173625 4489852 + MGP_CBAJ_P0024135 Oprm1 protein_coding protein_coding MGP_CBAJ_T0024136.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4173625 4424352 + MGP_CBAJ_P0024136 Oprm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024137.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4173712 4274129 + MGP_CBAJ_P0024137 Oprm1 protein_coding protein_coding MGP_CBAJ_T0024138.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4173712 4273373 + MGP_CBAJ_P0024138 Oprm1 protein_coding protein_coding MGP_CBAJ_T0024139.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4173712 4273373 + MGP_CBAJ_P0024139 Oprm1 protein_coding protein_coding MGP_CBAJ_T0024140.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4173712 4251251 + MGP_CBAJ_P0024140 Oprm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024141.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4173712 4490197 + MGP_CBAJ_P0024141 Oprm1 protein_coding protein_coding MGP_CBAJ_T0024142.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4173712 4273373 + MGP_CBAJ_P0024142 Oprm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024143.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4173712 4273373 + MGP_CBAJ_P0024143 Oprm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024144.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203517 4273863 + MGP_CBAJ_P0024144 Oprm1 protein_coding protein_coding MGP_CBAJ_T0024145.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203610 4489828 + MGP_CBAJ_P0024145 Oprm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024146.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203725 4263473 + MGP_CBAJ_P0024146 Oprm1 protein_coding protein_coding MGP_CBAJ_T0024147.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203725 4424402 + MGP_CBAJ_P0024147 Oprm1 protein_coding protein_coding MGP_CBAJ_T0024148.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203725 4260765 + MGP_CBAJ_P0024148 Oprm1 protein_coding protein_coding MGP_CBAJ_T0024149.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203725 4263455 + MGP_CBAJ_P0024149 Oprm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024150.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203725 4263630 + MGP_CBAJ_P0024150 Oprm1 protein_coding protein_coding MGP_CBAJ_T0024151.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203725 4490113 + MGP_CBAJ_P0024151 Oprm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024152.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203725 4424412 + MGP_CBAJ_P0024152 Oprm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024153.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203725 4490837 + MGP_CBAJ_P0024153 Oprm1 protein_coding protein_coding MGP_CBAJ_T0024154.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203725 4489828 + MGP_CBAJ_P0024154 Oprm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024155.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203725 4489849 + MGP_CBAJ_P0024155 Oprm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024156.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203725 4262004 + MGP_CBAJ_P0024156 Oprm1 protein_coding protein_coding MGP_CBAJ_T0024157.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203725 4490133 + MGP_CBAJ_P0024157 Oprm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024158.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203725 4489852 + MGP_CBAJ_P0024158 Oprm1 protein_coding protein_coding MGP_CBAJ_T0024159.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203725 4255202 + MGP_CBAJ_P0024159 Oprm1 protein_coding protein_coding MGP_CBAJ_T0024160.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203725 4252925 + MGP_CBAJ_P0024160 Oprm1 protein_coding protein_coding MGP_CBAJ_T0024161.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203753 4255008 + MGP_CBAJ_P0024161 Oprm1 protein_coding protein_coding MGP_CBAJ_T0024162.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203753 4262039 + MGP_CBAJ_P0024162 Oprm1 protein_coding protein_coding MGP_CBAJ_T0024163.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203891 4490133 + Oprm1 protein_coding processed_transcript MGP_CBAJ_T0024164.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4203941 4251198 + Oprm1 protein_coding processed_transcript MGP_CBAJ_T0024165.1 MGP_CBAJ_G0016723.1 mouse_genomes_project 10 4204015 4273502 + Oprm1 protein_coding processed_transcript MGP_CBAJ_T0098641.1 MGP_CBAJ_G0036896.1 mouse_genomes_project 10 92310768 92310865 - Gm24226 snRNA snRNA MGP_CBAJ_T0016863.1 MGP_CBAJ_G0014874.1 mouse_genomes_project 10 43335051 43343512 + 5730435O14Rik processed_transcript antisense MGP_CBAJ_T0016864.1 MGP_CBAJ_G0014874.1 mouse_genomes_project 10 43342599 43343501 + 5730435O14Rik processed_transcript retained_intron MGP_CBAJ_T0026166.1 MGP_CBAJ_G0017295.1 mouse_genomes_project 10 88330308 88361680 - MGP_CBAJ_P0026166 Celf5 protein_coding protein_coding MGP_CBAJ_T0026167.1 MGP_CBAJ_G0017295.1 mouse_genomes_project 10 88330309 88347711 - MGP_CBAJ_P0026167 Celf5 protein_coding protein_coding MGP_CBAJ_T0026168.1 MGP_CBAJ_G0017295.1 mouse_genomes_project 10 88332011 88349428 - MGP_CBAJ_P0026168 Celf5 protein_coding protein_coding MGP_CBAJ_T0026169.1 MGP_CBAJ_G0017295.1 mouse_genomes_project 10 88332629 88361655 - MGP_CBAJ_P0026169 Celf5 protein_coding protein_coding MGP_CBAJ_T0026170.1 MGP_CBAJ_G0017295.1 mouse_genomes_project 10 88338096 88341909 - Celf5 protein_coding retained_intron MGP_CBAJ_T0026171.1 MGP_CBAJ_G0017295.1 mouse_genomes_project 10 88338588 88347962 - Celf5 protein_coding retained_intron MGP_CBAJ_T0026172.1 MGP_CBAJ_G0017295.1 mouse_genomes_project 10 88338840 88361643 - Celf5 protein_coding retained_intron MGP_CBAJ_T0009492.1 MGP_CBAJ_G0007630.1 mouse_genomes_project 10 88383592 88383689 + Gm25595 miRNA miRNA MGP_CBAJ_T0098630.1 MGP_CBAJ_G0036885.1 mouse_genomes_project 10 67059667 67059773 - Gm26479 snRNA snRNA MGP_CBAJ_T0026931.1 MGP_CBAJ_G0017517.1 mouse_genomes_project 10 134445932 134485847 + MGP_CBAJ_P0026931 D930020B18Rik protein_coding protein_coding MGP_CBAJ_T0026932.1 MGP_CBAJ_G0017517.1 mouse_genomes_project 10 134446045 134501288 + MGP_CBAJ_P0026932 D930020B18Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0026933.1 MGP_CBAJ_G0017517.1 mouse_genomes_project 10 134446138 134501017 + MGP_CBAJ_P0026933 D930020B18Rik protein_coding protein_coding MGP_CBAJ_T0026934.1 MGP_CBAJ_G0017517.1 mouse_genomes_project 10 134446216 134501017 + MGP_CBAJ_P0026934 D930020B18Rik protein_coding protein_coding MGP_CBAJ_T0026699.1 MGP_CBAJ_G0017435.1 mouse_genomes_project 10 112899549 113124331 - MGP_CBAJ_P0026699 Lrriq1 protein_coding unknown_likely_coding MGP_CBAJ_T0026700.1 MGP_CBAJ_G0017435.1 mouse_genomes_project 10 112925137 113124535 - MGP_CBAJ_P0026700 Lrriq1 protein_coding protein_coding MGP_CBAJ_T0026701.1 MGP_CBAJ_G0017435.1 mouse_genomes_project 10 113100149 113124535 - MGP_CBAJ_P0026701 Lrriq1 protein_coding protein_coding MGP_CBAJ_T0026702.1 MGP_CBAJ_G0017435.1 mouse_genomes_project 10 113101081 113124506 - MGP_CBAJ_P0026702 Lrriq1 protein_coding protein_coding MGP_CBAJ_T0024859.1 MGP_CBAJ_G0016950.1 mouse_genomes_project 10 54681476 54737817 + Rfx6 protein_coding retained_intron MGP_CBAJ_T0024860.1 MGP_CBAJ_G0016950.1 mouse_genomes_project 10 54681476 54746326 + MGP_CBAJ_P0024860 Rfx6 protein_coding protein_coding MGP_CBAJ_T0024861.1 MGP_CBAJ_G0016950.1 mouse_genomes_project 10 54689228 54746326 + MGP_CBAJ_P0024861 Rfx6 protein_coding protein_coding MGP_CBAJ_T0025672.1 MGP_CBAJ_G0017160.1 mouse_genomes_project 10 84946841 84956570 + MGP_CBAJ_P0025672 Ilvbl protein_coding unknown_likely_coding MGP_CBAJ_T0000779.1 MGP_CBAJ_G0000716.1 mouse_genomes_project 10 21335177 21337524 - TEC TEC MGP_CBAJ_T0003014.1 MGP_CBAJ_G0002813.1 mouse_genomes_project 10 121637624 121753634 - 1700020G17Rik antisense antisense MGP_CBAJ_T0003015.1 MGP_CBAJ_G0002813.1 mouse_genomes_project 10 121654212 121753664 - 1700020G17Rik antisense antisense MGP_CBAJ_T0003016.1 MGP_CBAJ_G0002813.1 mouse_genomes_project 10 121665916 121753696 - 1700020G17Rik antisense antisense MGP_CBAJ_T0003017.1 MGP_CBAJ_G0002813.1 mouse_genomes_project 10 121691953 121753683 - 1700020G17Rik antisense antisense MGP_CBAJ_T0024477.1 MGP_CBAJ_G0016811.1 mouse_genomes_project 10 23538020 23539052 + MGP_CBAJ_P0024477 Taar3 protein_coding protein_coding MGP_CBAJ_T0024784.1 MGP_CBAJ_G0016922.1 mouse_genomes_project 10 44749957 44821793 + MGP_CBAJ_P0024784 Sec63 protein_coding protein_coding MGP_CBAJ_T0024785.1 MGP_CBAJ_G0016922.1 mouse_genomes_project 10 44750076 44818463 + Sec63 protein_coding retained_intron MGP_CBAJ_T0024786.1 MGP_CBAJ_G0016922.1 mouse_genomes_project 10 44750267 44800932 + Sec63 protein_coding retained_intron MGP_CBAJ_T0024787.1 MGP_CBAJ_G0016922.1 mouse_genomes_project 10 44806117 44817351 + Sec63 protein_coding processed_transcript MGP_CBAJ_T0024788.1 MGP_CBAJ_G0016922.1 mouse_genomes_project 10 44806117 44817354 + Sec63 protein_coding processed_transcript MGP_CBAJ_T0026962.1 MGP_CBAJ_G0017525.1 mouse_genomes_project 10 136237980 136782099 + MGP_CBAJ_P0026962 Fam19a2 protein_coding protein_coding MGP_CBAJ_T0026531.1 MGP_CBAJ_G0017379.1 mouse_genomes_project 10 99452830 99480278 - MGP_CBAJ_P0026531 Tmpo protein_coding protein_coding MGP_CBAJ_T0026532.1 MGP_CBAJ_G0017379.1 mouse_genomes_project 10 99452830 99480278 - MGP_CBAJ_P0026532 Tmpo protein_coding protein_coding MGP_CBAJ_T0026533.1 MGP_CBAJ_G0017379.1 mouse_genomes_project 10 99452830 99480278 - MGP_CBAJ_P0026533 Tmpo protein_coding protein_coding MGP_CBAJ_T0026534.1 MGP_CBAJ_G0017379.1 mouse_genomes_project 10 99452830 99480278 - MGP_CBAJ_P0026534 Tmpo protein_coding protein_coding MGP_CBAJ_T0026535.1 MGP_CBAJ_G0017379.1 mouse_genomes_project 10 99465676 99480278 - MGP_CBAJ_P0026535 Tmpo protein_coding protein_coding MGP_CBAJ_T0026034.1 MGP_CBAJ_G0017263.1 mouse_genomes_project 10 87643163 87663051 - MGP_CBAJ_P0026034 Lmnb2 protein_coding protein_coding MGP_CBAJ_T0026035.1 MGP_CBAJ_G0017263.1 mouse_genomes_project 10 87644603 87648218 - MGP_CBAJ_P0026035 Lmnb2 protein_coding protein_coding MGP_CBAJ_T0026036.1 MGP_CBAJ_G0017263.1 mouse_genomes_project 10 87654786 87662684 - Lmnb2 protein_coding processed_transcript MGP_CBAJ_T0025822.1 MGP_CBAJ_G0017212.1 mouse_genomes_project 10 86580329 86599411 + MGP_CBAJ_P0025822 Abca7 protein_coding protein_coding MGP_CBAJ_T0025823.1 MGP_CBAJ_G0017212.1 mouse_genomes_project 10 86581411 86599392 + MGP_CBAJ_P0025823 Abca7 protein_coding protein_coding MGP_CBAJ_T0025824.1 MGP_CBAJ_G0017212.1 mouse_genomes_project 10 86581450 86599407 + MGP_CBAJ_P0025824 Abca7 protein_coding protein_coding MGP_CBAJ_T0024814.1 MGP_CBAJ_G0016931.1 mouse_genomes_project 10 45983896 46013122 - MGP_CBAJ_P0024814 Qrsl1 protein_coding protein_coding MGP_CBAJ_T0024815.1 MGP_CBAJ_G0016931.1 mouse_genomes_project 10 45984130 45986813 - Qrsl1 protein_coding retained_intron MGP_CBAJ_T0024816.1 MGP_CBAJ_G0016931.1 mouse_genomes_project 10 45989855 46013122 - Qrsl1 protein_coding retained_intron MGP_CBAJ_T0024869.1 MGP_CBAJ_G0016954.1 mouse_genomes_project 10 55275925 55369981 + MGP_CBAJ_P0024869 Dcbld1 protein_coding protein_coding MGP_CBAJ_T0024870.1 MGP_CBAJ_G0016954.1 mouse_genomes_project 10 55275939 55330609 + Dcbld1 protein_coding retained_intron MGP_CBAJ_T0024871.1 MGP_CBAJ_G0016954.1 mouse_genomes_project 10 55275943 55369983 + MGP_CBAJ_P0024871 Dcbld1 protein_coding protein_coding MGP_CBAJ_T0024705.1 MGP_CBAJ_G0016905.1 mouse_genomes_project 10 43035484 43079029 + MGP_CBAJ_P0024705 Ak9 protein_coding protein_coding MGP_CBAJ_T0024706.1 MGP_CBAJ_G0016905.1 mouse_genomes_project 10 43041828 43184224 + MGP_CBAJ_P0024706 Ak9 protein_coding unknown_likely_coding MGP_CBAJ_T0024707.1 MGP_CBAJ_G0016905.1 mouse_genomes_project 10 43082458 43185470 + MGP_CBAJ_P0024707 Ak9 protein_coding protein_coding MGP_CBAJ_T0026780.1 MGP_CBAJ_G0017466.1 mouse_genomes_project 10 126606832 126728435 - MGP_CBAJ_P0026780 Tph2 protein_coding protein_coding MGP_CBAJ_T0026781.1 MGP_CBAJ_G0017466.1 mouse_genomes_project 10 126717495 126718971 - Tph2 protein_coding processed_transcript MGP_CBAJ_T0027313.1 MGP_CBAJ_G0017667.1 mouse_genomes_project 10 144018634 144019696 - MGP_CBAJ_P0027313 Olfr819 protein_coding protein_coding MGP_CBAJ_T0002943.1 MGP_CBAJ_G0002757.1 mouse_genomes_project 10 13053527 13055799 - B230364G03Rik antisense antisense MGP_CBAJ_T0025501.1 MGP_CBAJ_G0017111.1 mouse_genomes_project 10 82233256 82266813 - MGP_CBAJ_P0025501 Prmt2 protein_coding protein_coding MGP_CBAJ_T0025502.1 MGP_CBAJ_G0017111.1 mouse_genomes_project 10 82233261 82266785 - MGP_CBAJ_P0025502 Prmt2 protein_coding protein_coding MGP_CBAJ_T0025503.1 MGP_CBAJ_G0017111.1 mouse_genomes_project 10 82233266 82266778 - MGP_CBAJ_P0025503 Prmt2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025504.1 MGP_CBAJ_G0017111.1 mouse_genomes_project 10 82233266 82266784 - MGP_CBAJ_P0025504 Prmt2 protein_coding protein_coding MGP_CBAJ_T0025505.1 MGP_CBAJ_G0017111.1 mouse_genomes_project 10 82234010 82266805 - MGP_CBAJ_P0025505 Prmt2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025506.1 MGP_CBAJ_G0017111.1 mouse_genomes_project 10 82234452 82236897 - Prmt2 protein_coding retained_intron MGP_CBAJ_T0025507.1 MGP_CBAJ_G0017111.1 mouse_genomes_project 10 82234478 82237583 - Prmt2 protein_coding processed_transcript MGP_CBAJ_T0024309.1 MGP_CBAJ_G0016758.1 mouse_genomes_project 10 11794776 12048128 - MGP_CBAJ_P0024309 Aig1 protein_coding protein_coding MGP_CBAJ_T0024310.1 MGP_CBAJ_G0016758.1 mouse_genomes_project 10 11795391 12047970 - MGP_CBAJ_P0024310 Aig1 protein_coding protein_coding MGP_CBAJ_T0024311.1 MGP_CBAJ_G0016758.1 mouse_genomes_project 10 11802126 12048105 - MGP_CBAJ_P0024311 Aig1 protein_coding protein_coding MGP_CBAJ_T0024312.1 MGP_CBAJ_G0016758.1 mouse_genomes_project 10 11803263 12019022 - Aig1 protein_coding processed_transcript MGP_CBAJ_T0024313.1 MGP_CBAJ_G0016758.1 mouse_genomes_project 10 11967426 12040444 - Aig1 protein_coding retained_intron MGP_CBAJ_T0024314.1 MGP_CBAJ_G0016758.1 mouse_genomes_project 10 11999332 12048124 - Aig1 protein_coding retained_intron MGP_CBAJ_T0024315.1 MGP_CBAJ_G0016758.1 mouse_genomes_project 10 12002129 12047977 - Aig1 protein_coding processed_transcript MGP_CBAJ_T0003027.1 MGP_CBAJ_G0002819.1 mouse_genomes_project 10 131825339 131826285 - Gm16321 antisense antisense MGP_CBAJ_T0026279.1 MGP_CBAJ_G0017318.1 mouse_genomes_project 10 90248998 90487157 + MGP_CBAJ_P0026279 Chst11 protein_coding protein_coding MGP_CBAJ_T0024701.1 MGP_CBAJ_G0016902.1 mouse_genomes_project 10 42572740 42630016 + MGP_CBAJ_P0024701 Wasf1 protein_coding protein_coding MGP_CBAJ_T0024702.1 MGP_CBAJ_G0016902.1 mouse_genomes_project 10 42573092 42630017 + MGP_CBAJ_P0024702 Wasf1 protein_coding protein_coding MGP_CBAJ_T0099860.1 MGP_CBAJ_G0038115.1 mouse_genomes_project 10 63299943 63300075 - Gm23803 snoRNA snoRNA MGP_CBAJ_T0003035.1 MGP_CBAJ_G0002826.1 mouse_genomes_project 10 141211399 141213045 + Gm16229 antisense antisense MGP_CBAJ_T0006076.1 MGP_CBAJ_G0005065.1 mouse_genomes_project 10 140655226 140662631 + F420014N23Rik lincRNA lincRNA MGP_CBAJ_T0025887.1 MGP_CBAJ_G0017222.1 mouse_genomes_project 10 86783605 86785867 + MGP_CBAJ_P0025887 1600002K03Rik protein_coding protein_coding MGP_CBAJ_T0003034.1 MGP_CBAJ_G0002825.1 mouse_genomes_project 10 141135275 141136734 + Gm16217 antisense antisense MGP_CBAJ_T0003007.1 MGP_CBAJ_G0002808.1 mouse_genomes_project 10 95675727 95677713 - Igf1os antisense antisense MGP_CBAJ_T0003008.1 MGP_CBAJ_G0002808.1 mouse_genomes_project 10 95675739 95723231 - Igf1os antisense antisense MGP_CBAJ_T0025627.1 MGP_CBAJ_G0017147.1 mouse_genomes_project 10 84245118 84252054 + MGP_CBAJ_P0025627 1810043G02Rik protein_coding protein_coding MGP_CBAJ_T0025628.1 MGP_CBAJ_G0017147.1 mouse_genomes_project 10 84245248 84251875 + 1810043G02Rik protein_coding retained_intron MGP_CBAJ_T0025629.1 MGP_CBAJ_G0017147.1 mouse_genomes_project 10 84245265 84252054 + 1810043G02Rik protein_coding retained_intron MGP_CBAJ_T0025630.1 MGP_CBAJ_G0017147.1 mouse_genomes_project 10 84245267 84253525 + MGP_CBAJ_P0025630 1810043G02Rik protein_coding protein_coding MGP_CBAJ_T0025631.1 MGP_CBAJ_G0017147.1 mouse_genomes_project 10 84245275 84252056 + 1810043G02Rik protein_coding retained_intron MGP_CBAJ_T0025632.1 MGP_CBAJ_G0017147.1 mouse_genomes_project 10 84245287 84247117 + 1810043G02Rik protein_coding processed_transcript MGP_CBAJ_T0025633.1 MGP_CBAJ_G0017147.1 mouse_genomes_project 10 84247087 84251099 + 1810043G02Rik protein_coding processed_transcript MGP_CBAJ_T0025634.1 MGP_CBAJ_G0017147.1 mouse_genomes_project 10 84248387 84249520 + 1810043G02Rik protein_coding processed_transcript MGP_CBAJ_T0025756.1 MGP_CBAJ_G0017196.1 mouse_genomes_project 10 86337381 86367102 + MGP_CBAJ_P0025756 Palm protein_coding protein_coding MGP_CBAJ_T0025757.1 MGP_CBAJ_G0017196.1 mouse_genomes_project 10 86337381 86367102 + MGP_CBAJ_P0025757 Palm protein_coding protein_coding MGP_CBAJ_T0027239.1 MGP_CBAJ_G0017621.1 mouse_genomes_project 10 142784293 142790015 - MGP_CBAJ_P0027239 Rdh5 protein_coding protein_coding MGP_CBAJ_T0027240.1 MGP_CBAJ_G0017621.1 mouse_genomes_project 10 142784517 142788770 - MGP_CBAJ_P0027240 Rdh5 protein_coding protein_coding MGP_CBAJ_T0027241.1 MGP_CBAJ_G0017621.1 mouse_genomes_project 10 142784546 142785324 - Rdh5 protein_coding retained_intron MGP_CBAJ_T0027242.1 MGP_CBAJ_G0017621.1 mouse_genomes_project 10 142784925 142789990 - MGP_CBAJ_P0027242 Rdh5 protein_coding protein_coding MGP_CBAJ_T0027243.1 MGP_CBAJ_G0017621.1 mouse_genomes_project 10 142788018 142790015 - Rdh5 protein_coding retained_intron MGP_CBAJ_T0027245.1 MGP_CBAJ_G0017621.1 mouse_genomes_project 10 142788641 142789423 - MGP_CBAJ_P0027245 Rdh5 protein_coding protein_coding MGP_CBAJ_T0027246.1 MGP_CBAJ_G0017621.1 mouse_genomes_project 10 142789137 142793644 - MGP_CBAJ_P0027246 Rdh5 protein_coding protein_coding MGP_CBAJ_T0024075.1 MGP_CBAJ_G0016707.1 mouse_genomes_project 10 664699 893655 + Plekhg1 protein_coding retained_intron MGP_CBAJ_T0024076.1 MGP_CBAJ_G0016707.1 mouse_genomes_project 10 664916 893624 + Plekhg1 protein_coding retained_intron MGP_CBAJ_T0024077.1 MGP_CBAJ_G0016707.1 mouse_genomes_project 10 805814 925689 + MGP_CBAJ_P0024077 Plekhg1 protein_coding protein_coding MGP_CBAJ_T0024078.1 MGP_CBAJ_G0016707.1 mouse_genomes_project 10 811074 922934 + MGP_CBAJ_P0024078 Plekhg1 protein_coding protein_coding MGP_CBAJ_T0024079.1 MGP_CBAJ_G0016707.1 mouse_genomes_project 10 852613 868875 + Plekhg1 protein_coding retained_intron MGP_CBAJ_T0024080.1 MGP_CBAJ_G0016707.1 mouse_genomes_project 10 852617 925683 + MGP_CBAJ_P0024080 Plekhg1 protein_coding protein_coding MGP_CBAJ_T0024081.1 MGP_CBAJ_G0016707.1 mouse_genomes_project 10 912949 921911 + MGP_CBAJ_P0024081 Plekhg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0006037.1 MGP_CBAJ_G0005045.1 mouse_genomes_project 10 97794689 97813314 + 1500026H17Rik lincRNA lincRNA MGP_CBAJ_T0101513.1 MGP_CBAJ_G0039545.1 mouse_genomes_project 10 21394933 21402710 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0025464.1 MGP_CBAJ_G0017094.1 mouse_genomes_project 10 81582233 81702862 - MGP_CBAJ_P0025464 Cabin1 protein_coding protein_coding MGP_CBAJ_T0027061.1 MGP_CBAJ_G0017555.1 mouse_genomes_project 10 141031347 141038745 + MGP_CBAJ_P0027061 Stac3 protein_coding protein_coding MGP_CBAJ_T0027062.1 MGP_CBAJ_G0017555.1 mouse_genomes_project 10 141031355 141032500 + MGP_CBAJ_P0027062 Stac3 protein_coding protein_coding MGP_CBAJ_T0027063.1 MGP_CBAJ_G0017555.1 mouse_genomes_project 10 141031378 141038737 + MGP_CBAJ_P0027063 Stac3 protein_coding protein_coding MGP_CBAJ_T0027064.1 MGP_CBAJ_G0017555.1 mouse_genomes_project 10 141034152 141037410 + Stac3 protein_coding retained_intron MGP_CBAJ_T0027065.1 MGP_CBAJ_G0017555.1 mouse_genomes_project 10 141037146 141037914 + Stac3 protein_coding retained_intron MGP_CBAJ_T0009456.1 MGP_CBAJ_G0007594.1 mouse_genomes_project 10 26351887 26352013 - Gm27754 miRNA miRNA MGP_CBAJ_T0025215.1 MGP_CBAJ_G0017055.1 mouse_genomes_project 10 71900293 72004909 + Jmjd1c protein_coding retained_intron MGP_CBAJ_T0025216.1 MGP_CBAJ_G0017055.1 mouse_genomes_project 10 71900573 71967026 + Jmjd1c protein_coding retained_intron MGP_CBAJ_T0025217.1 MGP_CBAJ_G0017055.1 mouse_genomes_project 10 71900660 72038161 + MGP_CBAJ_P0025217 Jmjd1c protein_coding protein_coding MGP_CBAJ_T0025218.1 MGP_CBAJ_G0017055.1 mouse_genomes_project 10 71933945 72071661 + MGP_CBAJ_P0025218 Jmjd1c protein_coding protein_coding MGP_CBAJ_T0025219.1 MGP_CBAJ_G0017055.1 mouse_genomes_project 10 71933945 72071662 + MGP_CBAJ_P0025219 Jmjd1c protein_coding protein_coding MGP_CBAJ_T0025220.1 MGP_CBAJ_G0017055.1 mouse_genomes_project 10 71998910 72029352 + Jmjd1c protein_coding retained_intron MGP_CBAJ_T0025221.1 MGP_CBAJ_G0017055.1 mouse_genomes_project 10 71998914 72004911 + Jmjd1c protein_coding retained_intron MGP_CBAJ_T0025222.1 MGP_CBAJ_G0017055.1 mouse_genomes_project 10 72030920 72031537 + Jmjd1c protein_coding retained_intron MGP_CBAJ_T0025223.1 MGP_CBAJ_G0017055.1 mouse_genomes_project 10 72051329 72068007 + MGP_CBAJ_P0025223 Jmjd1c protein_coding protein_coding MGP_CBAJ_T0025224.1 MGP_CBAJ_G0017055.1 mouse_genomes_project 10 72052103 72058600 + Jmjd1c protein_coding retained_intron MGP_CBAJ_T0011152.1 MGP_CBAJ_G0009290.1 mouse_genomes_project 10 100480131 100480324 - Gm27999 misc_RNA misc_RNA MGP_CBAJ_T0098601.1 MGP_CBAJ_G0036856.1 mouse_genomes_project 10 1576602 1576762 + Gm22739 snRNA snRNA MGP_CBAJ_T0009497.1 MGP_CBAJ_G0007635.1 mouse_genomes_project 10 100549284 100549368 - Mir1251 miRNA miRNA MGP_CBAJ_T0099831.1 MGP_CBAJ_G0038086.1 mouse_genomes_project 10 7622548 7622679 - Gm25635 snoRNA snoRNA MGP_CBAJ_T0099847.1 MGP_CBAJ_G0038102.1 mouse_genomes_project 10 37975299 37975446 - Gm22554 snoRNA snoRNA MGP_CBAJ_T0002977.1 MGP_CBAJ_G0002784.1 mouse_genomes_project 10 82081855 82083609 + Gm16222 antisense antisense MGP_CBAJ_T0025477.1 MGP_CBAJ_G0017099.1 mouse_genomes_project 10 81762934 81770512 - MGP_CBAJ_P0025477 Gstt4 protein_coding protein_coding MGP_CBAJ_T0025478.1 MGP_CBAJ_G0017099.1 mouse_genomes_project 10 81762935 81770496 - MGP_CBAJ_P0025478 Gstt4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0002944.1 MGP_CBAJ_G0002758.1 mouse_genomes_project 10 16517420 16522228 - Gm20655 antisense antisense MGP_CBAJ_T0002945.1 MGP_CBAJ_G0002758.1 mouse_genomes_project 10 16520004 16526819 - Gm20655 antisense antisense MGP_CBAJ_T0024525.1 MGP_CBAJ_G0016833.1 mouse_genomes_project 10 25423370 25431695 - MGP_CBAJ_P0024525 Smlr1 protein_coding protein_coding MGP_CBAJ_T0024526.1 MGP_CBAJ_G0016833.1 mouse_genomes_project 10 25427679 25431570 - Smlr1 protein_coding retained_intron MGP_CBAJ_T0026554.1 MGP_CBAJ_G0017384.1 mouse_genomes_project 10 102053545 102097464 + MGP_CBAJ_P0026554 Lta4h protein_coding protein_coding MGP_CBAJ_T0002984.1 MGP_CBAJ_G0002790.1 mouse_genomes_project 10 86909268 86909831 - Gm15122 antisense antisense MGP_CBAJ_T0024829.1 MGP_CBAJ_G0016939.1 mouse_genomes_project 10 47435463 47593102 + MGP_CBAJ_P0024829 Popdc3 protein_coding protein_coding MGP_CBAJ_T0024830.1 MGP_CBAJ_G0016939.1 mouse_genomes_project 10 47563366 47596440 + MGP_CBAJ_P0024830 Popdc3 protein_coding protein_coding MGP_CBAJ_T0024831.1 MGP_CBAJ_G0016939.1 mouse_genomes_project 10 47563463 47596105 + MGP_CBAJ_P0024831 Popdc3 protein_coding protein_coding MGP_CBAJ_T0005989.1 MGP_CBAJ_G0005007.1 mouse_genomes_project 10 17024321 17027311 + Gm10827 lincRNA lincRNA MGP_CBAJ_T0009485.1 MGP_CBAJ_G0007623.1 mouse_genomes_project 10 87309129 87309199 + Mir6912 miRNA miRNA MGP_CBAJ_T0098616.1 MGP_CBAJ_G0036871.1 mouse_genomes_project 10 41268263 41268379 + Gm22105 snRNA snRNA MGP_CBAJ_T0027294.1 MGP_CBAJ_G0017653.1 mouse_genomes_project 10 143684772 143685699 - MGP_CBAJ_P0027294 Olfr803 protein_coding protein_coding MGP_CBAJ_T0098178.1 MGP_CBAJ_G0036451.1 mouse_genomes_project 10 142198680 142198811 + Gm26347 scaRNA scaRNA MGP_CBAJ_T0025467.1 MGP_CBAJ_G0017096.1 mouse_genomes_project 10 81712794 81722283 - MGP_CBAJ_P0025467 Gm20441 protein_coding protein_coding MGP_CBAJ_T0026983.1 MGP_CBAJ_G0017533.1 mouse_genomes_project 10 140459902 140461676 + MGP_CBAJ_P0026983 Mettl1 protein_coding protein_coding MGP_CBAJ_T0026984.1 MGP_CBAJ_G0017533.1 mouse_genomes_project 10 140460445 140462510 + Mettl1 protein_coding retained_intron MGP_CBAJ_T0026985.1 MGP_CBAJ_G0017533.1 mouse_genomes_project 10 140460446 140464066 + MGP_CBAJ_P0026985 Mettl1 protein_coding protein_coding MGP_CBAJ_T0026986.1 MGP_CBAJ_G0017533.1 mouse_genomes_project 10 140460467 140467422 + MGP_CBAJ_P0026986 Mettl1 protein_coding unknown_likely_coding MGP_CBAJ_T0026987.1 MGP_CBAJ_G0017533.1 mouse_genomes_project 10 140460471 140465807 + MGP_CBAJ_P0026987 Mettl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0024614.1 MGP_CBAJ_G0016872.1 mouse_genomes_project 10 35185452 35188529 + MGP_CBAJ_P0024614 Tspyl1 protein_coding protein_coding MGP_CBAJ_T0025749.1 MGP_CBAJ_G0017194.1 mouse_genomes_project 10 86321080 86326451 + MGP_CBAJ_P0025749 Fstl3 protein_coding protein_coding MGP_CBAJ_T0025750.1 MGP_CBAJ_G0017194.1 mouse_genomes_project 10 86321100 86322914 + Fstl3 protein_coding retained_intron MGP_CBAJ_T0025751.1 MGP_CBAJ_G0017194.1 mouse_genomes_project 10 86324401 86326428 + Fstl3 protein_coding processed_transcript MGP_CBAJ_T0011155.1 MGP_CBAJ_G0009293.1 mouse_genomes_project 10 100511984 100512187 - Gm27753 misc_RNA misc_RNA MGP_CBAJ_T0006005.1 MGP_CBAJ_G0005020.1 mouse_genomes_project 10 57250249 57257506 + Gm16998 lincRNA lincRNA MGP_CBAJ_T0009525.1 MGP_CBAJ_G0007663.1 mouse_genomes_project 10 142160579 142160655 + Gm25361 miRNA miRNA MGP_CBAJ_T0025616.1 MGP_CBAJ_G0017144.1 mouse_genomes_project 10 84102483 84106267 + MGP_CBAJ_P0025616 Krtap10-4 protein_coding protein_coding MGP_CBAJ_T0002975.1 MGP_CBAJ_G0002782.1 mouse_genomes_project 10 81903880 81906812 - Gm867 antisense antisense MGP_CBAJ_T0027210.1 MGP_CBAJ_G0017606.1 mouse_genomes_project 10 142436860 142441041 - MGP_CBAJ_P0027210 Rps26 protein_coding protein_coding MGP_CBAJ_T0027211.1 MGP_CBAJ_G0017606.1 mouse_genomes_project 10 142436861 142441040 - MGP_CBAJ_P0027211 Rps26 protein_coding unknown_likely_coding MGP_CBAJ_T0025074.1 MGP_CBAJ_G0017020.1 mouse_genomes_project 10 65624748 65650317 + MGP_CBAJ_P0025074 Aifm2 protein_coding protein_coding MGP_CBAJ_T0025075.1 MGP_CBAJ_G0017020.1 mouse_genomes_project 10 65624771 65636824 + Aifm2 protein_coding retained_intron MGP_CBAJ_T0025076.1 MGP_CBAJ_G0017020.1 mouse_genomes_project 10 65624795 65650924 + MGP_CBAJ_P0025076 Aifm2 protein_coding protein_coding MGP_CBAJ_T0025077.1 MGP_CBAJ_G0017020.1 mouse_genomes_project 10 65624807 65650311 + MGP_CBAJ_P0025077 Aifm2 protein_coding protein_coding MGP_CBAJ_T0025078.1 MGP_CBAJ_G0017020.1 mouse_genomes_project 10 65624816 65625720 + Aifm2 protein_coding processed_transcript MGP_CBAJ_T0025079.1 MGP_CBAJ_G0017020.1 mouse_genomes_project 10 65629923 65650317 + MGP_CBAJ_P0025079 Aifm2 protein_coding protein_coding MGP_CBAJ_T0025080.1 MGP_CBAJ_G0017020.1 mouse_genomes_project 10 65637050 65646234 + Aifm2 protein_coding retained_intron MGP_CBAJ_T0097749.1 MGP_CBAJ_G0036022.1 mouse_genomes_project 10 75541620 75544255 - pseudogene pseudogene MGP_CBAJ_T0025697.1 MGP_CBAJ_G0017177.1 mouse_genomes_project 10 85669555 85724053 + MGP_CBAJ_P0025697 Vmn2r81 protein_coding protein_coding MGP_CBAJ_T0024303.1 MGP_CBAJ_G0016756.1 mouse_genomes_project 10 11664411 11693534 - MGP_CBAJ_P0024303 Pex3 protein_coding protein_coding MGP_CBAJ_T0024304.1 MGP_CBAJ_G0016756.1 mouse_genomes_project 10 11665454 11693290 - MGP_CBAJ_P0024304 Pex3 protein_coding protein_coding MGP_CBAJ_T0024305.1 MGP_CBAJ_G0016756.1 mouse_genomes_project 10 11669496 11676491 - Pex3 protein_coding retained_intron MGP_CBAJ_T0024306.1 MGP_CBAJ_G0016756.1 mouse_genomes_project 10 11671795 11693256 - Pex3 protein_coding processed_transcript MGP_CBAJ_T0024307.1 MGP_CBAJ_G0016756.1 mouse_genomes_project 10 11676256 11693211 - Pex3 protein_coding processed_transcript MGP_CBAJ_T0011157.1 MGP_CBAJ_G0009295.1 mouse_genomes_project 10 100544884 100544992 - Gm27366 misc_RNA misc_RNA MGP_CBAJ_T0025560.1 MGP_CBAJ_G0017126.1 mouse_genomes_project 10 83166872 83297236 - MGP_CBAJ_P0025560 Col18a1 protein_coding protein_coding MGP_CBAJ_T0025561.1 MGP_CBAJ_G0017126.1 mouse_genomes_project 10 83166875 83233958 - MGP_CBAJ_P0025561 Col18a1 protein_coding protein_coding MGP_CBAJ_T0025562.1 MGP_CBAJ_G0017126.1 mouse_genomes_project 10 83167710 83233987 - MGP_CBAJ_P0025562 Col18a1 protein_coding protein_coding MGP_CBAJ_T0025563.1 MGP_CBAJ_G0017126.1 mouse_genomes_project 10 83195419 83204098 - MGP_CBAJ_P0025563 Col18a1 protein_coding protein_coding MGP_CBAJ_T0025564.1 MGP_CBAJ_G0017126.1 mouse_genomes_project 10 83210978 83234228 - MGP_CBAJ_P0025564 Col18a1 protein_coding protein_coding MGP_CBAJ_T0027165.1 MGP_CBAJ_G0017588.1 mouse_genomes_project 10 141997779 142031339 + MGP_CBAJ_P0027165 Stat2 protein_coding protein_coding MGP_CBAJ_T0027166.1 MGP_CBAJ_G0017588.1 mouse_genomes_project 10 141997779 142031339 + MGP_CBAJ_P0027166 Stat2 protein_coding protein_coding MGP_CBAJ_T0006031.1 MGP_CBAJ_G0005040.1 mouse_genomes_project 10 91955755 91964898 + 4930463O16Rik lincRNA lincRNA MGP_CBAJ_T0006032.1 MGP_CBAJ_G0005040.1 mouse_genomes_project 10 91956196 91960189 + 4930463O16Rik lincRNA lincRNA MGP_CBAJ_T0026374.1 MGP_CBAJ_G0017348.1 mouse_genomes_project 10 94448585 94449059 - MGP_CBAJ_P0026374 Fabp3-ps1 protein_coding protein_coding MGP_CBAJ_T0025353.1 MGP_CBAJ_G0017079.1 mouse_genomes_project 10 78183017 78206643 + MGP_CBAJ_P0025353 Zwint protein_coding protein_coding MGP_CBAJ_T0025354.1 MGP_CBAJ_G0017079.1 mouse_genomes_project 10 78183067 78201476 + MGP_CBAJ_P0025354 Zwint protein_coding protein_coding MGP_CBAJ_T0025355.1 MGP_CBAJ_G0017079.1 mouse_genomes_project 10 78183068 78200852 + MGP_CBAJ_P0025355 Zwint protein_coding protein_coding MGP_CBAJ_T0025356.1 MGP_CBAJ_G0017079.1 mouse_genomes_project 10 78183615 78184771 + Zwint protein_coding retained_intron MGP_CBAJ_T0025357.1 MGP_CBAJ_G0017079.1 mouse_genomes_project 10 78184409 78185561 + Zwint protein_coding retained_intron MGP_CBAJ_T0025358.1 MGP_CBAJ_G0017079.1 mouse_genomes_project 10 78184763 78206003 + Zwint protein_coding processed_transcript MGP_CBAJ_T0099871.1 MGP_CBAJ_G0038126.1 mouse_genomes_project 10 101181374 101181517 - Gm24241 snoRNA snoRNA MGP_CBAJ_T0027292.1 MGP_CBAJ_G0017652.1 mouse_genomes_project 10 143673486 143674622 - MGP_CBAJ_P0027292 Olfr802 protein_coding protein_coding MGP_CBAJ_T0027293.1 MGP_CBAJ_G0017652.1 mouse_genomes_project 10 143673486 143679723 - MGP_CBAJ_P0027293 Olfr802 protein_coding protein_coding MGP_CBAJ_T0009460.1 MGP_CBAJ_G0007598.1 mouse_genomes_project 10 47151607 47151718 - Gm24271 miRNA miRNA MGP_CBAJ_T0025521.1 MGP_CBAJ_G0017117.1 mouse_genomes_project 10 82527023 82584579 + MGP_CBAJ_P0025521 Mcm3ap protein_coding protein_coding MGP_CBAJ_T0098663.1 MGP_CBAJ_G0036918.1 mouse_genomes_project 10 142817838 142817938 + Gm25494 snRNA snRNA MGP_CBAJ_T0025619.1 MGP_CBAJ_G0017146.1 mouse_genomes_project 10 84163661 84227593 - MGP_CBAJ_P0025619 Trpm2 protein_coding protein_coding MGP_CBAJ_T0025620.1 MGP_CBAJ_G0017146.1 mouse_genomes_project 10 84165098 84221697 - Trpm2 protein_coding processed_transcript MGP_CBAJ_T0025621.1 MGP_CBAJ_G0017146.1 mouse_genomes_project 10 84165236 84187699 - Trpm2 protein_coding retained_intron MGP_CBAJ_T0025622.1 MGP_CBAJ_G0017146.1 mouse_genomes_project 10 84165294 84188888 - Trpm2 protein_coding retained_intron MGP_CBAJ_T0025623.1 MGP_CBAJ_G0017146.1 mouse_genomes_project 10 84171991 84176744 - Trpm2 protein_coding retained_intron MGP_CBAJ_T0025624.1 MGP_CBAJ_G0017146.1 mouse_genomes_project 10 84173222 84196301 - Trpm2 protein_coding retained_intron MGP_CBAJ_T0025625.1 MGP_CBAJ_G0017146.1 mouse_genomes_project 10 84217029 84227543 - MGP_CBAJ_P0025625 Trpm2 protein_coding protein_coding MGP_CBAJ_T0025626.1 MGP_CBAJ_G0017146.1 mouse_genomes_project 10 84221284 84228302 - Trpm2 protein_coding processed_transcript MGP_CBAJ_T0026743.1 MGP_CBAJ_G0017451.1 mouse_genomes_project 10 121574342 121585241 + E2f7 protein_coding processed_transcript MGP_CBAJ_T0026744.1 MGP_CBAJ_G0017451.1 mouse_genomes_project 10 121574368 121593644 + MGP_CBAJ_P0026744 E2f7 protein_coding protein_coding MGP_CBAJ_T0026745.1 MGP_CBAJ_G0017451.1 mouse_genomes_project 10 121574371 121605135 + E2f7 protein_coding retained_intron MGP_CBAJ_T0026746.1 MGP_CBAJ_G0017451.1 mouse_genomes_project 10 121574371 121640424 + MGP_CBAJ_P0026746 E2f7 protein_coding protein_coding MGP_CBAJ_T0026747.1 MGP_CBAJ_G0017451.1 mouse_genomes_project 10 121574416 121638550 + MGP_CBAJ_P0026747 E2f7 protein_coding protein_coding MGP_CBAJ_T0026748.1 MGP_CBAJ_G0017451.1 mouse_genomes_project 10 121574475 121591584 + MGP_CBAJ_P0026748 E2f7 protein_coding protein_coding MGP_CBAJ_T0026749.1 MGP_CBAJ_G0017451.1 mouse_genomes_project 10 121591268 121593254 + E2f7 protein_coding processed_transcript MGP_CBAJ_T0026750.1 MGP_CBAJ_G0017451.1 mouse_genomes_project 10 121591338 121611648 + MGP_CBAJ_P0026750 E2f7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026751.1 MGP_CBAJ_G0017451.1 mouse_genomes_project 10 121600851 121602750 + E2f7 protein_coding retained_intron MGP_CBAJ_T0006054.1 MGP_CBAJ_G0005049.1 mouse_genomes_project 10 100581263 100817556 - Gm20757 lincRNA lincRNA MGP_CBAJ_T0027069.1 MGP_CBAJ_G0017559.1 mouse_genomes_project 10 141068048 141163271 - MGP_CBAJ_P0027069 Lrp1 protein_coding protein_coding MGP_CBAJ_T0027070.1 MGP_CBAJ_G0017559.1 mouse_genomes_project 10 141068486 141069485 - Lrp1 protein_coding retained_intron MGP_CBAJ_T0027071.1 MGP_CBAJ_G0017559.1 mouse_genomes_project 10 141069122 141070030 - Lrp1 protein_coding retained_intron MGP_CBAJ_T0027072.1 MGP_CBAJ_G0017559.1 mouse_genomes_project 10 141072080 141073093 - Lrp1 protein_coding retained_intron MGP_CBAJ_T0027073.1 MGP_CBAJ_G0017559.1 mouse_genomes_project 10 141076222 141079749 - MGP_CBAJ_P0027073 Lrp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027074.1 MGP_CBAJ_G0017559.1 mouse_genomes_project 10 141113832 141117387 - Lrp1 protein_coding retained_intron MGP_CBAJ_T0027075.1 MGP_CBAJ_G0017559.1 mouse_genomes_project 10 141117230 141118962 - MGP_CBAJ_P0027075 Lrp1 protein_coding protein_coding MGP_CBAJ_T0027076.1 MGP_CBAJ_G0017559.1 mouse_genomes_project 10 141126352 141163271 - Lrp1 protein_coding retained_intron MGP_CBAJ_T0027077.1 MGP_CBAJ_G0017559.1 mouse_genomes_project 10 141127909 141163107 - MGP_CBAJ_P0027077 Lrp1 protein_coding protein_coding MGP_CBAJ_T0027078.1 MGP_CBAJ_G0017559.1 mouse_genomes_project 10 141138747 141163059 - MGP_CBAJ_P0027078 Lrp1 protein_coding protein_coding MGP_CBAJ_T0026058.1 MGP_CBAJ_G0017270.1 mouse_genomes_project 10 87864744 87881909 - MGP_CBAJ_P0026058 Creb3l3 protein_coding protein_coding MGP_CBAJ_T0026059.1 MGP_CBAJ_G0017270.1 mouse_genomes_project 10 87872980 87875611 - Creb3l3 protein_coding retained_intron MGP_CBAJ_T0026060.1 MGP_CBAJ_G0017270.1 mouse_genomes_project 10 87873660 87874944 - Creb3l3 protein_coding retained_intron MGP_CBAJ_T0026061.1 MGP_CBAJ_G0017270.1 mouse_genomes_project 10 87875666 87881789 - Creb3l3 protein_coding processed_transcript MGP_CBAJ_T0011147.1 MGP_CBAJ_G0009285.1 mouse_genomes_project 10 67093986 67094269 + Gm22803 misc_RNA misc_RNA MGP_CBAJ_T0024986.1 MGP_CBAJ_G0016995.1 mouse_genomes_project 10 63451894 63453990 - MGP_CBAJ_P0024986 Ddit4 protein_coding protein_coding MGP_CBAJ_T0026277.1 MGP_CBAJ_G0017316.1 mouse_genomes_project 10 90114029 90152307 + MGP_CBAJ_P0026277 protein_coding protein_coding MGP_CBAJ_T0026023.1 MGP_CBAJ_G0017257.1 mouse_genomes_project 10 87561742 87564377 + MGP_CBAJ_P0026023 Oaz1 protein_coding protein_coding MGP_CBAJ_T0026024.1 MGP_CBAJ_G0017257.1 mouse_genomes_project 10 87561768 87564371 + Oaz1 protein_coding retained_intron MGP_CBAJ_T0026025.1 MGP_CBAJ_G0017257.1 mouse_genomes_project 10 87561769 87564044 + MGP_CBAJ_P0026025 Oaz1 protein_coding protein_coding MGP_CBAJ_T0026026.1 MGP_CBAJ_G0017257.1 mouse_genomes_project 10 87561772 87564377 + MGP_CBAJ_P0026026 Oaz1 protein_coding protein_coding MGP_CBAJ_T0026027.1 MGP_CBAJ_G0017257.1 mouse_genomes_project 10 87562798 87564064 + MGP_CBAJ_P0026027 Oaz1 protein_coding protein_coding MGP_CBAJ_T0026028.1 MGP_CBAJ_G0017257.1 mouse_genomes_project 10 87563167 87564381 + MGP_CBAJ_P0026028 Oaz1 protein_coding protein_coding MGP_CBAJ_T0097751.1 MGP_CBAJ_G0036024.1 mouse_genomes_project 10 81518893 81519405 - pseudogene pseudogene MGP_CBAJ_T0024922.1 MGP_CBAJ_G0016973.1 mouse_genomes_project 10 61412756 61416326 + MGP_CBAJ_P0024922 Fabp7 protein_coding protein_coding MGP_CBAJ_T0024923.1 MGP_CBAJ_G0016973.1 mouse_genomes_project 10 61412798 61414688 + MGP_CBAJ_P0024923 Fabp7 protein_coding protein_coding MGP_CBAJ_T0025536.1 MGP_CBAJ_G0017121.1 mouse_genomes_project 10 82671633 82702344 - MGP_CBAJ_P0025536 Col6a2 protein_coding protein_coding MGP_CBAJ_T0025537.1 MGP_CBAJ_G0017121.1 mouse_genomes_project 10 82673706 82702039 - MGP_CBAJ_P0025537 Col6a2 protein_coding protein_coding MGP_CBAJ_T0025538.1 MGP_CBAJ_G0017121.1 mouse_genomes_project 10 82676882 82702039 - Col6a2 protein_coding retained_intron MGP_CBAJ_T0026992.1 MGP_CBAJ_G0017536.1 mouse_genomes_project 10 140486296 140491751 + MGP_CBAJ_P0026992 Cdk4 protein_coding protein_coding MGP_CBAJ_T0026993.1 MGP_CBAJ_G0017536.1 mouse_genomes_project 10 140486365 140490380 + MGP_CBAJ_P0026993 Cdk4 protein_coding protein_coding MGP_CBAJ_T0026994.1 MGP_CBAJ_G0017536.1 mouse_genomes_project 10 140486366 140489555 + MGP_CBAJ_P0026994 Cdk4 protein_coding protein_coding MGP_CBAJ_T0026995.1 MGP_CBAJ_G0017536.1 mouse_genomes_project 10 140486371 140490380 + MGP_CBAJ_P0026995 Cdk4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026996.1 MGP_CBAJ_G0017536.1 mouse_genomes_project 10 140486376 140491125 + Cdk4 protein_coding retained_intron MGP_CBAJ_T0026997.1 MGP_CBAJ_G0017536.1 mouse_genomes_project 10 140486378 140488658 + Cdk4 protein_coding retained_intron MGP_CBAJ_T0026998.1 MGP_CBAJ_G0017536.1 mouse_genomes_project 10 140486630 140489609 + MGP_CBAJ_P0026998 Cdk4 protein_coding protein_coding MGP_CBAJ_T0026999.1 MGP_CBAJ_G0017536.1 mouse_genomes_project 10 140486998 140490849 + MGP_CBAJ_P0026999 Cdk4 protein_coding unknown_likely_coding MGP_CBAJ_T0027000.1 MGP_CBAJ_G0017536.1 mouse_genomes_project 10 140487675 140488693 + Cdk4 protein_coding retained_intron MGP_CBAJ_T0027001.1 MGP_CBAJ_G0017536.1 mouse_genomes_project 10 140489453 140491063 + Cdk4 protein_coding retained_intron MGP_CBAJ_T0025167.1 MGP_CBAJ_G0017041.1 mouse_genomes_project 10 67125387 67156927 + MGP_CBAJ_P0025167 Dna2 protein_coding protein_coding MGP_CBAJ_T0025168.1 MGP_CBAJ_G0017041.1 mouse_genomes_project 10 67125436 67156509 + MGP_CBAJ_P0025168 Dna2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025169.1 MGP_CBAJ_G0017041.1 mouse_genomes_project 10 67125441 67130254 + Dna2 protein_coding retained_intron MGP_CBAJ_T0025170.1 MGP_CBAJ_G0017041.1 mouse_genomes_project 10 67125471 67148913 + Dna2 protein_coding retained_intron MGP_CBAJ_T0025171.1 MGP_CBAJ_G0017041.1 mouse_genomes_project 10 67148457 67156926 + Dna2 protein_coding retained_intron MGP_CBAJ_T0025172.1 MGP_CBAJ_G0017041.1 mouse_genomes_project 10 67148752 67156921 + Dna2 protein_coding retained_intron MGP_CBAJ_T0098660.1 MGP_CBAJ_G0036915.1 mouse_genomes_project 10 140581676 140581765 - Gm23664 snRNA snRNA MGP_CBAJ_T0026038.1 MGP_CBAJ_G0017265.1 mouse_genomes_project 10 87695455 87793000 - MGP_CBAJ_P0026038 Gng7 protein_coding protein_coding MGP_CBAJ_T0026039.1 MGP_CBAJ_G0017265.1 mouse_genomes_project 10 87695455 87776508 - MGP_CBAJ_P0026039 Gng7 protein_coding protein_coding MGP_CBAJ_T0026040.1 MGP_CBAJ_G0017265.1 mouse_genomes_project 10 87695455 87792980 - MGP_CBAJ_P0026040 Gng7 protein_coding protein_coding MGP_CBAJ_T0026041.1 MGP_CBAJ_G0017265.1 mouse_genomes_project 10 87695460 87776521 - MGP_CBAJ_P0026041 Gng7 protein_coding protein_coding MGP_CBAJ_T0026042.1 MGP_CBAJ_G0017265.1 mouse_genomes_project 10 87698018 87773335 - MGP_CBAJ_P0026042 Gng7 protein_coding protein_coding MGP_CBAJ_T0026043.1 MGP_CBAJ_G0017265.1 mouse_genomes_project 10 87698543 87792968 - MGP_CBAJ_P0026043 Gng7 protein_coding protein_coding MGP_CBAJ_T0012262.1 MGP_CBAJ_G0010374.1 mouse_genomes_project 10 45405676 45406109 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006077.1 MGP_CBAJ_G0005066.1 mouse_genomes_project 10 141949708 141951899 - Gm26847 lincRNA lincRNA MGP_CBAJ_T0026086.1 MGP_CBAJ_G0017278.1 mouse_genomes_project 10 88016516 88054290 - MGP_CBAJ_P0026086 Atcay protein_coding protein_coding MGP_CBAJ_T0026087.1 MGP_CBAJ_G0017278.1 mouse_genomes_project 10 88016516 88054242 - MGP_CBAJ_P0026087 Atcay protein_coding nonsense_mediated_decay MGP_CBAJ_T0026088.1 MGP_CBAJ_G0017278.1 mouse_genomes_project 10 88022133 88025598 - Atcay protein_coding retained_intron MGP_CBAJ_T0025423.1 MGP_CBAJ_G0017087.1 mouse_genomes_project 10 81238301 81441339 - MGP_CBAJ_P0025423 Gucd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025427.1 MGP_CBAJ_G0017087.1 mouse_genomes_project 10 81323498 81435347 - MGP_CBAJ_P0025427 Gucd1 protein_coding protein_coding MGP_CBAJ_T0025429.1 MGP_CBAJ_G0017087.1 mouse_genomes_project 10 81430878 81441262 - MGP_CBAJ_P0025429 Gucd1 protein_coding protein_coding MGP_CBAJ_T0025430.1 MGP_CBAJ_G0017087.1 mouse_genomes_project 10 81432863 81441355 - MGP_CBAJ_P0025430 Gucd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0025431.1 MGP_CBAJ_G0017087.1 mouse_genomes_project 10 81432897 81435330 - Gucd1 protein_coding retained_intron MGP_CBAJ_T0025432.1 MGP_CBAJ_G0017087.1 mouse_genomes_project 10 81433030 81441236 - MGP_CBAJ_P0025432 Gucd1 protein_coding protein_coding MGP_CBAJ_T0025433.1 MGP_CBAJ_G0017087.1 mouse_genomes_project 10 81433782 81441887 - MGP_CBAJ_P0025433 Gucd1 protein_coding protein_coding MGP_CBAJ_T0025434.1 MGP_CBAJ_G0017087.1 mouse_genomes_project 10 81435245 81441326 - MGP_CBAJ_P0025434 Gucd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0000795.1 MGP_CBAJ_G0000731.1 mouse_genomes_project 10 120761599 120761891 - TEC TEC MGP_CBAJ_T0024789.1 MGP_CBAJ_G0016923.1 mouse_genomes_project 10 44849669 44952291 + MGP_CBAJ_P0024789 Scml4 protein_coding protein_coding MGP_CBAJ_T0024790.1 MGP_CBAJ_G0016923.1 mouse_genomes_project 10 44849842 44920040 + MGP_CBAJ_P0024790 Scml4 protein_coding protein_coding MGP_CBAJ_T0024791.1 MGP_CBAJ_G0016923.1 mouse_genomes_project 10 44849966 44925226 + MGP_CBAJ_P0024791 Scml4 protein_coding protein_coding MGP_CBAJ_T0024792.1 MGP_CBAJ_G0016923.1 mouse_genomes_project 10 44850092 44952289 + MGP_CBAJ_P0024792 Scml4 protein_coding protein_coding MGP_CBAJ_T0024793.1 MGP_CBAJ_G0016923.1 mouse_genomes_project 10 44854813 44919905 + MGP_CBAJ_P0024793 Scml4 protein_coding protein_coding MGP_CBAJ_T0024794.1 MGP_CBAJ_G0016923.1 mouse_genomes_project 10 44892687 44926004 + MGP_CBAJ_P0024794 Scml4 protein_coding protein_coding MGP_CBAJ_T0024795.1 MGP_CBAJ_G0016923.1 mouse_genomes_project 10 44925202 44950281 + Scml4 protein_coding retained_intron MGP_CBAJ_T0024796.1 MGP_CBAJ_G0016923.1 mouse_genomes_project 10 44925780 44939062 + Scml4 protein_coding retained_intron MGP_CBAJ_T0024797.1 MGP_CBAJ_G0016923.1 mouse_genomes_project 10 44930745 44950232 + Scml4 protein_coding processed_transcript MGP_CBAJ_T0024582.1 MGP_CBAJ_G0016854.1 mouse_genomes_project 10 31815957 31820687 + MGP_CBAJ_P0024582 Gm5422 protein_coding protein_coding MGP_CBAJ_T0027149.1 MGP_CBAJ_G0017584.1 mouse_genomes_project 10 141944923 141950932 + MGP_CBAJ_P0027149 Mip protein_coding protein_coding MGP_CBAJ_T0027299.1 MGP_CBAJ_G0017657.1 mouse_genomes_project 10 143776056 143779010 + MGP_CBAJ_P0027299 Olfr808 protein_coding protein_coding MGP_CBAJ_T0027300.1 MGP_CBAJ_G0017657.1 mouse_genomes_project 10 143778071 143779010 + MGP_CBAJ_P0027300 Olfr808 protein_coding protein_coding MGP_CBAJ_T0026950.1 MGP_CBAJ_G0017522.1 mouse_genomes_project 10 135582225 135811355 + Ppm1h protein_coding retained_intron MGP_CBAJ_T0026951.1 MGP_CBAJ_G0017522.1 mouse_genomes_project 10 135582241 135865537 + MGP_CBAJ_P0026951 Ppm1h protein_coding protein_coding MGP_CBAJ_T0026952.1 MGP_CBAJ_G0017522.1 mouse_genomes_project 10 135582245 135886728 + MGP_CBAJ_P0026952 Ppm1h protein_coding protein_coding MGP_CBAJ_T0026953.1 MGP_CBAJ_G0017522.1 mouse_genomes_project 10 135673000 135740591 + Ppm1h protein_coding processed_transcript MGP_CBAJ_T0026954.1 MGP_CBAJ_G0017522.1 mouse_genomes_project 10 135740363 135747200 + Ppm1h protein_coding retained_intron MGP_CBAJ_T0026955.1 MGP_CBAJ_G0017522.1 mouse_genomes_project 10 135740521 135882779 + Ppm1h protein_coding retained_intron MGP_CBAJ_T0026956.1 MGP_CBAJ_G0017522.1 mouse_genomes_project 10 135740566 135820294 + Ppm1h protein_coding processed_transcript MGP_CBAJ_T0026957.1 MGP_CBAJ_G0017522.1 mouse_genomes_project 10 135829572 135882940 + MGP_CBAJ_P0026957 Ppm1h protein_coding protein_coding MGP_CBAJ_T0026672.1 MGP_CBAJ_G0017429.1 mouse_genomes_project 10 110087748 110099872 - MGP_CBAJ_P0026672 4930430F08Rik protein_coding protein_coding MGP_CBAJ_T0098602.1 MGP_CBAJ_G0036857.1 mouse_genomes_project 10 2549072 2549180 + Gm23573 snRNA snRNA MGP_CBAJ_T0026635.1 MGP_CBAJ_G0017406.1 mouse_genomes_project 10 104465186 104490547 - MGP_CBAJ_P0026635 Nudt4 protein_coding protein_coding MGP_CBAJ_T0011142.1 MGP_CBAJ_G0009280.1 mouse_genomes_project 10 25133297 25133550 - Gm26167 misc_RNA misc_RNA MGP_CBAJ_T0024401.1 MGP_CBAJ_G0016786.1 mouse_genomes_project 10 19340515 19342304 - MGP_CBAJ_P0024401 4933406P04Rik protein_coding protein_coding MGP_CBAJ_T0000778.1 MGP_CBAJ_G0000715.1 mouse_genomes_project 10 17799188 17799478 - TEC TEC MGP_CBAJ_T0002995.1 MGP_CBAJ_G0002798.1 mouse_genomes_project 10 88332240 88334054 + Gm16105 antisense antisense MGP_CBAJ_T0005983.1 MGP_CBAJ_G0005003.1 mouse_genomes_project 10 9123289 9159717 - 4930432B10Rik lincRNA lincRNA MGP_CBAJ_T0005984.1 MGP_CBAJ_G0005003.1 mouse_genomes_project 10 9133758 9159939 - 4930432B10Rik lincRNA lincRNA MGP_CBAJ_T0025695.1 MGP_CBAJ_G0017175.1 mouse_genomes_project 10 85562801 85604654 + MGP_CBAJ_P0025695 protein_coding protein_coding MGP_CBAJ_T0012241.1 MGP_CBAJ_G0010353.1 mouse_genomes_project 10 8151396 8152609 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0024087.1 MGP_CBAJ_G0016710.1 mouse_genomes_project 10 1409734 1460019 - MGP_CBAJ_P0024087 Zbtb2 protein_coding protein_coding MGP_CBAJ_T0024088.1 MGP_CBAJ_G0016710.1 mouse_genomes_project 10 1410135 1459373 - MGP_CBAJ_P0024088 Zbtb2 protein_coding protein_coding MGP_CBAJ_T0025566.1 MGP_CBAJ_G0017128.1 mouse_genomes_project 10 83416707 83426994 + MGP_CBAJ_P0025566 Pofut2 protein_coding protein_coding MGP_CBAJ_T0024291.1 MGP_CBAJ_G0016754.1 mouse_genomes_project 10 11295429 11420023 - MGP_CBAJ_P0024291 Phactr2 protein_coding protein_coding MGP_CBAJ_T0024292.1 MGP_CBAJ_G0016754.1 mouse_genomes_project 10 11301086 11490138 - MGP_CBAJ_P0024292 Phactr2 protein_coding protein_coding MGP_CBAJ_T0024293.1 MGP_CBAJ_G0016754.1 mouse_genomes_project 10 11301086 11604211 - MGP_CBAJ_P0024293 Phactr2 protein_coding protein_coding MGP_CBAJ_T0024294.1 MGP_CBAJ_G0016754.1 mouse_genomes_project 10 11301088 11420152 - MGP_CBAJ_P0024294 Phactr2 protein_coding protein_coding MGP_CBAJ_T0024295.1 MGP_CBAJ_G0016754.1 mouse_genomes_project 10 11301949 11490355 - MGP_CBAJ_P0024295 Phactr2 protein_coding protein_coding MGP_CBAJ_T0024296.1 MGP_CBAJ_G0016754.1 mouse_genomes_project 10 11482798 11490116 - Phactr2 protein_coding processed_transcript MGP_CBAJ_T0024194.1 MGP_CBAJ_G0016730.1 mouse_genomes_project 10 5161920 5202968 + MGP_CBAJ_P0024194 Lats1 protein_coding protein_coding MGP_CBAJ_T0024195.1 MGP_CBAJ_G0016730.1 mouse_genomes_project 10 5172230 5200066 + MGP_CBAJ_P0024195 Lats1 protein_coding protein_coding MGP_CBAJ_T0016850.1 MGP_CBAJ_G0014873.1 mouse_genomes_project 10 41123475 41249179 - E130307A14Rik processed_transcript processed_transcript MGP_CBAJ_T0016851.1 MGP_CBAJ_G0014873.1 mouse_genomes_project 10 41123477 41249178 - E130307A14Rik processed_transcript processed_transcript MGP_CBAJ_T0016852.1 MGP_CBAJ_G0014873.1 mouse_genomes_project 10 41124688 41248988 - E130307A14Rik processed_transcript processed_transcript MGP_CBAJ_T0016853.1 MGP_CBAJ_G0014873.1 mouse_genomes_project 10 41124718 41249021 - E130307A14Rik processed_transcript processed_transcript MGP_CBAJ_T0016854.1 MGP_CBAJ_G0014873.1 mouse_genomes_project 10 41124761 41249173 - E130307A14Rik processed_transcript processed_transcript MGP_CBAJ_T0016855.1 MGP_CBAJ_G0014873.1 mouse_genomes_project 10 41124777 41248986 - E130307A14Rik processed_transcript processed_transcript MGP_CBAJ_T0016856.1 MGP_CBAJ_G0014873.1 mouse_genomes_project 10 41125039 41248948 - E130307A14Rik processed_transcript processed_transcript MGP_CBAJ_T0016857.1 MGP_CBAJ_G0014873.1 mouse_genomes_project 10 41141554 41153614 - E130307A14Rik processed_transcript processed_transcript MGP_CBAJ_T0016858.1 MGP_CBAJ_G0014873.1 mouse_genomes_project 10 41141646 41249154 - E130307A14Rik processed_transcript processed_transcript MGP_CBAJ_T0016859.1 MGP_CBAJ_G0014873.1 mouse_genomes_project 10 41162612 41245353 - E130307A14Rik processed_transcript processed_transcript MGP_CBAJ_T0016860.1 MGP_CBAJ_G0014873.1 mouse_genomes_project 10 41163180 41249178 - E130307A14Rik processed_transcript processed_transcript MGP_CBAJ_T0016861.1 MGP_CBAJ_G0014873.1 mouse_genomes_project 10 41189931 41249178 - E130307A14Rik processed_transcript processed_transcript MGP_CBAJ_T0016862.1 MGP_CBAJ_G0014873.1 mouse_genomes_project 10 41238584 41249139 - E130307A14Rik processed_transcript processed_transcript MGP_CBAJ_T0000781.1 MGP_CBAJ_G0000718.1 mouse_genomes_project 10 38357493 38357840 + TEC TEC MGP_CBAJ_T0025038.1 MGP_CBAJ_G0017006.1 mouse_genomes_project 10 64842873 64847859 + MGP_CBAJ_P0025038 Pcbd1 protein_coding protein_coding MGP_CBAJ_T0002971.1 MGP_CBAJ_G0002778.1 mouse_genomes_project 10 67480374 67481460 - 1700120B22Rik antisense antisense MGP_CBAJ_T0026442.1 MGP_CBAJ_G0017364.1 mouse_genomes_project 10 96636852 96648268 - MGP_CBAJ_P0026442 Spic protein_coding protein_coding MGP_CBAJ_T0026443.1 MGP_CBAJ_G0017364.1 mouse_genomes_project 10 96637220 96648268 - MGP_CBAJ_P0026443 Spic protein_coding nonsense_mediated_decay MGP_CBAJ_T0026444.1 MGP_CBAJ_G0017364.1 mouse_genomes_project 10 96637843 96650112 - MGP_CBAJ_P0026444 Spic protein_coding protein_coding MGP_CBAJ_T0026445.1 MGP_CBAJ_G0017364.1 mouse_genomes_project 10 96639751 96648268 - Spic protein_coding retained_intron MGP_CBAJ_T0025724.1 MGP_CBAJ_G0017186.1 mouse_genomes_project 10 86205529 86212257 + MGP_CBAJ_P0025724 Tpgs1 protein_coding protein_coding MGP_CBAJ_T0012288.1 MGP_CBAJ_G0010400.1 mouse_genomes_project 10 102297329 102297792 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0026783.1 MGP_CBAJ_G0017468.1 mouse_genomes_project 10 126849859 126877820 - MGP_CBAJ_P0026783 Rab21 protein_coding protein_coding MGP_CBAJ_T0027098.1 MGP_CBAJ_G0017566.1 mouse_genomes_project 10 141314877 141319336 - MGP_CBAJ_P0027098 Gpr182 protein_coding protein_coding MGP_CBAJ_T0025673.1 MGP_CBAJ_G0017161.1 mouse_genomes_project 10 84956586 84964031 - MGP_CBAJ_P0025673 Syde1 protein_coding protein_coding MGP_CBAJ_T0012249.1 MGP_CBAJ_G0010361.1 mouse_genomes_project 10 23658641 23659256 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0026510.1 MGP_CBAJ_G0017376.1 mouse_genomes_project 10 99253220 99363043 - MGP_CBAJ_P0026510 Apaf1 protein_coding protein_coding MGP_CBAJ_T0026511.1 MGP_CBAJ_G0017376.1 mouse_genomes_project 10 99253222 99255501 - Apaf1 protein_coding retained_intron MGP_CBAJ_T0026512.1 MGP_CBAJ_G0017376.1 mouse_genomes_project 10 99253227 99363151 - MGP_CBAJ_P0026512 Apaf1 protein_coding protein_coding MGP_CBAJ_T0026513.1 MGP_CBAJ_G0017376.1 mouse_genomes_project 10 99254512 99363085 - MGP_CBAJ_P0026513 Apaf1 protein_coding protein_coding MGP_CBAJ_T0026514.1 MGP_CBAJ_G0017376.1 mouse_genomes_project 10 99259616 99264289 - Apaf1 protein_coding processed_transcript MGP_CBAJ_T0026515.1 MGP_CBAJ_G0017376.1 mouse_genomes_project 10 99260618 99263600 - Apaf1 protein_coding retained_intron MGP_CBAJ_T0026516.1 MGP_CBAJ_G0017376.1 mouse_genomes_project 10 99337760 99362810 - MGP_CBAJ_P0026516 Apaf1 protein_coding protein_coding MGP_CBAJ_T0026517.1 MGP_CBAJ_G0017376.1 mouse_genomes_project 10 99339236 99363151 - MGP_CBAJ_P0026517 Apaf1 protein_coding protein_coding MGP_CBAJ_T0000798.1 MGP_CBAJ_G0000734.1 mouse_genomes_project 10 125824541 125824856 + TEC TEC MGP_CBAJ_T0098628.1 MGP_CBAJ_G0036883.1 mouse_genomes_project 10 60738309 60738409 + Gm24285 snRNA snRNA MGP_CBAJ_T0006079.1 MGP_CBAJ_G0005068.1 mouse_genomes_project 10 142462259 142469852 + lincRNA lincRNA MGP_CBAJ_T0099832.1 MGP_CBAJ_G0038087.1 mouse_genomes_project 10 8488867 8488998 + Gm23601 snoRNA snoRNA MGP_CBAJ_T0024597.1 MGP_CBAJ_G0016860.1 mouse_genomes_project 10 34349704 34455912 - MGP_CBAJ_P0024597 Clvs2 protein_coding protein_coding MGP_CBAJ_T0024598.1 MGP_CBAJ_G0016860.1 mouse_genomes_project 10 34372515 34455339 - Clvs2 protein_coding processed_transcript MGP_CBAJ_T0024599.1 MGP_CBAJ_G0016860.1 mouse_genomes_project 10 34426906 34455762 - Clvs2 protein_coding processed_transcript MGP_CBAJ_T0024600.1 MGP_CBAJ_G0016860.1 mouse_genomes_project 10 34431308 34455765 - MGP_CBAJ_P0024600 Clvs2 protein_coding protein_coding MGP_CBAJ_T0026804.1 MGP_CBAJ_G0017476.1 mouse_genomes_project 10 127806332 127808586 - MGP_CBAJ_P0026804 4933416C03Rik protein_coding protein_coding MGP_CBAJ_T0000791.1 MGP_CBAJ_G0000727.1 mouse_genomes_project 10 107803680 107804044 - TEC TEC MGP_CBAJ_T0002969.1 MGP_CBAJ_G0002776.1 mouse_genomes_project 10 67183297 67184178 + Gm16135 antisense antisense MGP_CBAJ_T0006036.1 MGP_CBAJ_G0005044.1 mouse_genomes_project 10 96303842 96308310 - Gm26546 lincRNA lincRNA MGP_CBAJ_T0101518.1 MGP_CBAJ_G0039550.1 mouse_genomes_project 10 115348496 115348655 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0011143.1 MGP_CBAJ_G0009281.1 mouse_genomes_project 10 42562924 42563167 - Gm22948 misc_RNA misc_RNA MGP_CBAJ_T0024480.1 MGP_CBAJ_G0016814.1 mouse_genomes_project 10 23578214 23579252 - MGP_CBAJ_P0024480 Taar6 protein_coding protein_coding MGP_CBAJ_T0005998.1 MGP_CBAJ_G0005013.1 mouse_genomes_project 10 24150885 24156053 + Gm15271 lincRNA lincRNA MGP_CBAJ_T0006003.1 MGP_CBAJ_G0005018.1 mouse_genomes_project 10 43380094 43382925 - Gm29095 lincRNA lincRNA MGP_CBAJ_T0098632.1 MGP_CBAJ_G0036887.1 mouse_genomes_project 10 70869010 70869116 - Gm22829 snRNA snRNA MGP_CBAJ_T0002957.1 MGP_CBAJ_G0002766.1 mouse_genomes_project 10 43320794 43323585 + Gm17196 antisense antisense MGP_CBAJ_T0026660.1 MGP_CBAJ_G0017423.1 mouse_genomes_project 10 109204097 109206058 - MGP_CBAJ_P0026660 Csl protein_coding protein_coding MGP_CBAJ_T0099833.1 MGP_CBAJ_G0038088.1 mouse_genomes_project 10 9208823 9208961 - Gm25979 snoRNA snoRNA MGP_CBAJ_T0099890.1 MGP_CBAJ_G0038145.1 mouse_genomes_project 10 141755986 141756058 + Mir677 snoRNA snoRNA MGP_CBAJ_T0024134.1 MGP_CBAJ_G0016722.1 mouse_genomes_project 10 4156553 4176898 - MGP_CBAJ_P0024134 Gm10945 protein_coding protein_coding MGP_CBAJ_T0027009.1 MGP_CBAJ_G0017542.1 mouse_genomes_project 10 140639921 140645746 - MGP_CBAJ_P0027009 Arhgef25 protein_coding unknown_likely_coding MGP_CBAJ_T0027010.1 MGP_CBAJ_G0017542.1 mouse_genomes_project 10 140639924 140647453 - MGP_CBAJ_P0027010 Arhgef25 protein_coding protein_coding MGP_CBAJ_T0027011.1 MGP_CBAJ_G0017542.1 mouse_genomes_project 10 140639924 140647222 - MGP_CBAJ_P0027011 Arhgef25 protein_coding protein_coding MGP_CBAJ_T0099834.1 MGP_CBAJ_G0038089.1 mouse_genomes_project 10 9581015 9581145 + Gm22546 snoRNA snoRNA MGP_CBAJ_T0024352.1 MGP_CBAJ_G0016769.1 mouse_genomes_project 10 16906276 16999459 - MGP_CBAJ_P0024352 Ect2l protein_coding protein_coding MGP_CBAJ_T0012237.1 MGP_CBAJ_G0010349.1 mouse_genomes_project 10 959657 960101 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000786.1 MGP_CBAJ_G0000723.1 mouse_genomes_project 10 84972258 84975011 - TEC TEC MGP_CBAJ_T0009518.1 MGP_CBAJ_G0007656.1 mouse_genomes_project 10 140092177 140092287 - Mir378d miRNA miRNA MGP_CBAJ_T0002942.1 MGP_CBAJ_G0002756.1 mouse_genomes_project 10 12939873 12943911 + Gm16234 antisense antisense MGP_CBAJ_T0009470.1 MGP_CBAJ_G0007608.1 mouse_genomes_project 10 65693864 65693949 + Mir5108 miRNA miRNA MGP_CBAJ_T0025674.1 MGP_CBAJ_G0017162.1 mouse_genomes_project 10 84984745 84991116 - MGP_CBAJ_P0025674 Olfr1357 protein_coding protein_coding MGP_CBAJ_T0025675.1 MGP_CBAJ_G0017162.1 mouse_genomes_project 10 84984745 84985757 - MGP_CBAJ_P0025675 Olfr1357 protein_coding protein_coding MGP_CBAJ_T0025676.1 MGP_CBAJ_G0017162.1 mouse_genomes_project 10 84985009 84991116 - MGP_CBAJ_P0025676 Olfr1357 protein_coding protein_coding MGP_CBAJ_T0026360.1 MGP_CBAJ_G0017344.1 mouse_genomes_project 10 93934919 93984835 + MGP_CBAJ_P0026360 Timp3 protein_coding protein_coding MGP_CBAJ_T0026361.1 MGP_CBAJ_G0017344.1 mouse_genomes_project 10 93935101 93941296 + Timp3 protein_coding processed_transcript MGP_CBAJ_T0026362.1 MGP_CBAJ_G0017344.1 mouse_genomes_project 10 93935103 93962469 + Timp3 protein_coding processed_transcript MGP_CBAJ_T0026363.1 MGP_CBAJ_G0017344.1 mouse_genomes_project 10 93937396 93979321 + MGP_CBAJ_P0026363 Timp3 protein_coding protein_coding MGP_CBAJ_T0027107.1 MGP_CBAJ_G0017572.1 mouse_genomes_project 10 141498671 141513373 + MGP_CBAJ_P0027107 BC089597 protein_coding protein_coding MGP_CBAJ_T0025066.1 MGP_CBAJ_G0017015.1 mouse_genomes_project 10 65364522 65478722 + MGP_CBAJ_P0025066 Lrrc20 protein_coding protein_coding MGP_CBAJ_T0000777.1 MGP_CBAJ_G0000714.1 mouse_genomes_project 10 12543731 12544557 + TEC TEC MGP_CBAJ_T0024956.1 MGP_CBAJ_G0016988.1 mouse_genomes_project 10 62761309 62814047 + MGP_CBAJ_P0024956 P4ha1 protein_coding protein_coding MGP_CBAJ_T0024957.1 MGP_CBAJ_G0016988.1 mouse_genomes_project 10 62761377 62812709 + MGP_CBAJ_P0024957 P4ha1 protein_coding protein_coding MGP_CBAJ_T0024958.1 MGP_CBAJ_G0016988.1 mouse_genomes_project 10 62761381 62813004 + MGP_CBAJ_P0024958 P4ha1 protein_coding protein_coding MGP_CBAJ_T0024217.1 MGP_CBAJ_G0016736.1 mouse_genomes_project 10 5789641 6121651 - MGP_CBAJ_P0024217 Ust protein_coding protein_coding MGP_CBAJ_T0027224.1 MGP_CBAJ_G0017611.1 mouse_genomes_project 10 142540693 142559932 + MGP_CBAJ_P0027224 Pmel protein_coding protein_coding MGP_CBAJ_T0027263.1 MGP_CBAJ_G0017631.1 mouse_genomes_project 10 143180386 143184411 + MGP_CBAJ_P0027263 Olfr774 protein_coding protein_coding MGP_CBAJ_T0027264.1 MGP_CBAJ_G0017631.1 mouse_genomes_project 10 143183328 143184411 + MGP_CBAJ_P0027264 Olfr774 protein_coding protein_coding MGP_CBAJ_T0025163.1 MGP_CBAJ_G0017040.1 mouse_genomes_project 10 67095060 67124860 + MGP_CBAJ_P0025163 Slc25a16 protein_coding protein_coding MGP_CBAJ_T0025164.1 MGP_CBAJ_G0017040.1 mouse_genomes_project 10 67095094 67108496 + Slc25a16 protein_coding retained_intron MGP_CBAJ_T0025165.1 MGP_CBAJ_G0017040.1 mouse_genomes_project 10 67095107 67122791 + MGP_CBAJ_P0025165 Slc25a16 protein_coding protein_coding MGP_CBAJ_T0025166.1 MGP_CBAJ_G0017040.1 mouse_genomes_project 10 67120803 67122796 + Slc25a16 protein_coding retained_intron MGP_CBAJ_T0009501.1 MGP_CBAJ_G0007639.1 mouse_genomes_project 10 103369462 103369525 - Mir7211 miRNA miRNA MGP_CBAJ_T0026703.1 MGP_CBAJ_G0017436.1 mouse_genomes_project 10 113269383 113329096 + MGP_CBAJ_P0026703 Slc6a15 protein_coding unknown_likely_coding MGP_CBAJ_T0016880.1 MGP_CBAJ_G0014882.1 mouse_genomes_project 10 140766209 140767374 + Gm20492 processed_transcript processed_transcript MGP_CBAJ_T0099886.1 MGP_CBAJ_G0038141.1 mouse_genomes_project 10 133203822 133203882 + Gm24298 snoRNA snoRNA MGP_CBAJ_T0099839.1 MGP_CBAJ_G0038094.1 mouse_genomes_project 10 21131115 21131224 - Gm23839 snoRNA snoRNA MGP_CBAJ_T0025479.1 MGP_CBAJ_G0017100.1 mouse_genomes_project 10 81784412 81787449 - MGP_CBAJ_P0025479 Gstt2 protein_coding protein_coding MGP_CBAJ_T0026920.1 MGP_CBAJ_G0017510.1 mouse_genomes_project 10 133594868 133666038 - MGP_CBAJ_P0026920 Lemd3 protein_coding protein_coding MGP_CBAJ_T0026921.1 MGP_CBAJ_G0017510.1 mouse_genomes_project 10 133595307 133666038 - MGP_CBAJ_P0026921 Lemd3 protein_coding protein_coding MGP_CBAJ_T0005979.1 MGP_CBAJ_G0004999.1 mouse_genomes_project 10 1463497 1468335 + Gm21781 lincRNA lincRNA MGP_CBAJ_T0025618.1 MGP_CBAJ_G0017145.1 mouse_genomes_project 10 84151012 84155972 - MGP_CBAJ_P0025618 Lrrc3 protein_coding protein_coding MGP_CBAJ_T0099843.1 MGP_CBAJ_G0038098.1 mouse_genomes_project 10 25115028 25115159 - Gm25016 snoRNA snoRNA MGP_CBAJ_T0024924.1 MGP_CBAJ_G0016974.1 mouse_genomes_project 10 61422210 61432250 + MGP_CBAJ_P0024924 Smpdl3a protein_coding protein_coding MGP_CBAJ_T0024925.1 MGP_CBAJ_G0016974.1 mouse_genomes_project 10 61422249 61441543 + MGP_CBAJ_P0024925 Smpdl3a protein_coding protein_coding MGP_CBAJ_T0024926.1 MGP_CBAJ_G0016974.1 mouse_genomes_project 10 61422443 61437233 + Smpdl3a protein_coding processed_transcript MGP_CBAJ_T0026901.1 MGP_CBAJ_G0017505.1 mouse_genomes_project 10 132722008 132723634 + Tmbim4 protein_coding processed_transcript MGP_CBAJ_T0026902.1 MGP_CBAJ_G0017505.1 mouse_genomes_project 10 132722030 132723627 + Tmbim4 protein_coding processed_transcript MGP_CBAJ_T0026903.1 MGP_CBAJ_G0017505.1 mouse_genomes_project 10 132722076 132742478 + MGP_CBAJ_P0026903 Tmbim4 protein_coding protein_coding MGP_CBAJ_T0026904.1 MGP_CBAJ_G0017505.1 mouse_genomes_project 10 132723069 132723627 + Tmbim4 protein_coding processed_transcript MGP_CBAJ_T0026905.1 MGP_CBAJ_G0017505.1 mouse_genomes_project 10 132731740 132751256 + MGP_CBAJ_P0026905 Tmbim4 protein_coding protein_coding MGP_CBAJ_T0026906.1 MGP_CBAJ_G0017505.1 mouse_genomes_project 10 132731770 132742633 + MGP_CBAJ_P0026906 Tmbim4 protein_coding protein_coding MGP_CBAJ_T0026907.1 MGP_CBAJ_G0017505.1 mouse_genomes_project 10 132731783 132751178 + MGP_CBAJ_P0026907 Tmbim4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0026908.1 MGP_CBAJ_G0017505.1 mouse_genomes_project 10 132747549 132751078 + Tmbim4 protein_coding retained_intron MGP_CBAJ_T0026909.1 MGP_CBAJ_G0017505.1 mouse_genomes_project 10 132748697 132750611 + Tmbim4 protein_coding retained_intron MGP_CBAJ_T0026910.1 MGP_CBAJ_G0017505.1 mouse_genomes_project 10 132748697 132751256 + Tmbim4 protein_coding retained_intron MGP_CBAJ_T0025733.1 MGP_CBAJ_G0017190.1 mouse_genomes_project 10 86255440 86277170 + MGP_CBAJ_P0025733 Hcn2 protein_coding protein_coding MGP_CBAJ_T0002962.1 MGP_CBAJ_G0002771.1 mouse_genomes_project 10 47561504 47563486 - Gm15934 antisense antisense MGP_CBAJ_T0005993.1 MGP_CBAJ_G0005009.1 mouse_genomes_project 10 20919382 20948103 + Gm5420 lincRNA lincRNA MGP_CBAJ_T0005994.1 MGP_CBAJ_G0005009.1 mouse_genomes_project 10 20923819 20925446 + Gm5420 lincRNA lincRNA MGP_CBAJ_T0025410.1 MGP_CBAJ_G0017083.1 mouse_genomes_project 10 80889321 80903226 + Rab36 protein_coding retained_intron MGP_CBAJ_T0025411.1 MGP_CBAJ_G0017083.1 mouse_genomes_project 10 80889329 80909186 + MGP_CBAJ_P0025411 Rab36 protein_coding protein_coding MGP_CBAJ_T0025412.1 MGP_CBAJ_G0017083.1 mouse_genomes_project 10 80889347 80908541 + MGP_CBAJ_P0025412 Rab36 protein_coding protein_coding MGP_CBAJ_T0025413.1 MGP_CBAJ_G0017083.1 mouse_genomes_project 10 80889489 80902010 + Rab36 protein_coding retained_intron MGP_CBAJ_T0025414.1 MGP_CBAJ_G0017083.1 mouse_genomes_project 10 80889536 80900532 + Rab36 protein_coding retained_intron MGP_CBAJ_T0025415.1 MGP_CBAJ_G0017083.1 mouse_genomes_project 10 80889585 80905133 + MGP_CBAJ_P0025415 Rab36 protein_coding protein_coding MGP_CBAJ_T0025416.1 MGP_CBAJ_G0017083.1 mouse_genomes_project 10 80890099 80908499 + MGP_CBAJ_P0025416 Rab36 protein_coding protein_coding MGP_CBAJ_T0025417.1 MGP_CBAJ_G0017083.1 mouse_genomes_project 10 80890486 80905128 + Rab36 protein_coding retained_intron MGP_CBAJ_T0002955.1 MGP_CBAJ_G0002765.1 mouse_genomes_project 10 41960803 41962399 - Cdk19os antisense antisense MGP_CBAJ_T0002956.1 MGP_CBAJ_G0002765.1 mouse_genomes_project 10 41961387 41962399 - Cdk19os antisense antisense MGP_CBAJ_T0098640.1 MGP_CBAJ_G0036895.1 mouse_genomes_project 10 92095022 92095117 + Gm25657 snRNA snRNA MGP_CBAJ_T0026737.1 MGP_CBAJ_G0017450.1 mouse_genomes_project 10 120352505 120719148 - MGP_CBAJ_P0026737 Nav3 protein_coding protein_coding MGP_CBAJ_T0026738.1 MGP_CBAJ_G0017450.1 mouse_genomes_project 10 120352505 120522062 - MGP_CBAJ_P0026738 Nav3 protein_coding protein_coding MGP_CBAJ_T0026739.1 MGP_CBAJ_G0017450.1 mouse_genomes_project 10 120388863 120398339 - Nav3 protein_coding processed_transcript MGP_CBAJ_T0026740.1 MGP_CBAJ_G0017450.1 mouse_genomes_project 10 120430770 120442126 - MGP_CBAJ_P0026740 Nav3 protein_coding protein_coding MGP_CBAJ_T0026741.1 MGP_CBAJ_G0017450.1 mouse_genomes_project 10 120586326 120611947 - Nav3 protein_coding retained_intron MGP_CBAJ_T0026742.1 MGP_CBAJ_G0017450.1 mouse_genomes_project 10 120607022 121238270 - Nav3 protein_coding retained_intron MGP_CBAJ_T0002958.1 MGP_CBAJ_G0002767.1 mouse_genomes_project 10 43547915 43555083 + BC048559 antisense antisense MGP_CBAJ_T0024875.1 MGP_CBAJ_G0016956.1 mouse_genomes_project 10 55416693 55416780 + MGP_CBAJ_P0024875 Gm26741 protein_coding protein_coding MGP_CBAJ_T0026081.1 MGP_CBAJ_G0017274.1 mouse_genomes_project 10 87976366 87984802 + MGP_CBAJ_P0026081 Eef2 protein_coding protein_coding MGP_CBAJ_T0026082.1 MGP_CBAJ_G0017274.1 mouse_genomes_project 10 87976383 87984796 + MGP_CBAJ_P0026082 Eef2 protein_coding unknown_likely_coding MGP_CBAJ_T0024289.1 MGP_CBAJ_G0016752.1 mouse_genomes_project 10 11231669 11262335 - MGP_CBAJ_P0024289 Zc2hc1b protein_coding protein_coding MGP_CBAJ_T0025653.1 MGP_CBAJ_G0017151.1 mouse_genomes_project 10 84364130 84379370 + MGP_CBAJ_P0025653 Icosl protein_coding protein_coding MGP_CBAJ_T0012303.1 MGP_CBAJ_G0010415.1 mouse_genomes_project 10 141565757 141566052 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0024256.1 MGP_CBAJ_G0016747.1 mouse_genomes_project 10 9228028 9372998 + MGP_CBAJ_P0024256 Epm2a protein_coding protein_coding MGP_CBAJ_T0024257.1 MGP_CBAJ_G0016747.1 mouse_genomes_project 10 9228077 9360339 + Epm2a protein_coding processed_transcript MGP_CBAJ_T0101526.1 MGP_CBAJ_G0039558.1 mouse_genomes_project 10 143597525 143597940 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0009474.1 MGP_CBAJ_G0007612.1 mouse_genomes_project 10 82233360 82233444 - Mir678 miRNA miRNA MGP_CBAJ_T0027225.1 MGP_CBAJ_G0017612.1 mouse_genomes_project 10 142559834 142589032 - MGP_CBAJ_P0027225 Dgka protein_coding protein_coding MGP_CBAJ_T0027226.1 MGP_CBAJ_G0017612.1 mouse_genomes_project 10 142559883 142582702 - MGP_CBAJ_P0027226 Dgka protein_coding unknown_likely_coding MGP_CBAJ_T0099877.1 MGP_CBAJ_G0038132.1 mouse_genomes_project 10 116119970 116120102 - Gm24237 snoRNA snoRNA MGP_CBAJ_T0009499.1 MGP_CBAJ_G0007637.1 mouse_genomes_project 10 102030664 102030720 + Mir7688 miRNA miRNA MGP_CBAJ_T0006018.1 MGP_CBAJ_G0005029.1 mouse_genomes_project 10 71351125 71352070 + Gm28139 lincRNA lincRNA MGP_CBAJ_T0026648.1 MGP_CBAJ_G0017417.1 mouse_genomes_project 10 108303171 108420709 + MGP_CBAJ_P0026648 Atp2b1 protein_coding unknown_likely_coding MGP_CBAJ_T0026649.1 MGP_CBAJ_G0017417.1 mouse_genomes_project 10 108303633 108420710 + MGP_CBAJ_P0026649 Atp2b1 protein_coding protein_coding MGP_CBAJ_T0098639.1 MGP_CBAJ_G0036894.1 mouse_genomes_project 10 90446892 90446995 - Gm23122 snRNA snRNA MGP_CBAJ_T0025655.1 MGP_CBAJ_G0017153.1 mouse_genomes_project 10 84492199 84506443 - MGP_CBAJ_P0025655 Pwp2 protein_coding protein_coding MGP_CBAJ_T0025669.1 MGP_CBAJ_G0017157.1 mouse_genomes_project 10 84777009 84778960 + MGP_CBAJ_P0025669 Cstb protein_coding protein_coding MGP_CBAJ_T0099888.1 MGP_CBAJ_G0038143.1 mouse_genomes_project 10 141601857 141601988 - Gm23996 snoRNA snoRNA MGP_CBAJ_T0024316.1 MGP_CBAJ_G0016759.1 mouse_genomes_project 10 12160217 12363717 + MGP_CBAJ_P0024316 Hivep2 protein_coding protein_coding MGP_CBAJ_T0024317.1 MGP_CBAJ_G0016759.1 mouse_genomes_project 10 12160521 12364503 + MGP_CBAJ_P0024317 Hivep2 protein_coding protein_coding MGP_CBAJ_T0024318.1 MGP_CBAJ_G0016759.1 mouse_genomes_project 10 12160521 12364502 + MGP_CBAJ_P0024318 Hivep2 protein_coding protein_coding MGP_CBAJ_T0024319.1 MGP_CBAJ_G0016759.1 mouse_genomes_project 10 12160786 12341934 + MGP_CBAJ_P0024319 Hivep2 protein_coding protein_coding MGP_CBAJ_T0024320.1 MGP_CBAJ_G0016759.1 mouse_genomes_project 10 12161095 12200785 + Hivep2 protein_coding retained_intron MGP_CBAJ_T0024321.1 MGP_CBAJ_G0016759.1 mouse_genomes_project 10 12161158 12289070 + Hivep2 protein_coding processed_transcript MGP_CBAJ_T0024911.1 MGP_CBAJ_G0016972.1 mouse_genomes_project 10 61246914 61371121 + MGP_CBAJ_P0024911 Pkib protein_coding protein_coding MGP_CBAJ_T0024912.1 MGP_CBAJ_G0016972.1 mouse_genomes_project 10 61246984 61373305 + MGP_CBAJ_P0024912 Pkib protein_coding protein_coding MGP_CBAJ_T0024913.1 MGP_CBAJ_G0016972.1 mouse_genomes_project 10 61246989 61337049 + Pkib protein_coding retained_intron MGP_CBAJ_T0024914.1 MGP_CBAJ_G0016972.1 mouse_genomes_project 10 61247027 61273336 + Pkib protein_coding retained_intron MGP_CBAJ_T0024915.1 MGP_CBAJ_G0016972.1 mouse_genomes_project 10 61247057 61360391 + MGP_CBAJ_P0024915 Pkib protein_coding protein_coding MGP_CBAJ_T0024916.1 MGP_CBAJ_G0016972.1 mouse_genomes_project 10 61255893 61344741 + Pkib protein_coding processed_transcript MGP_CBAJ_T0024917.1 MGP_CBAJ_G0016972.1 mouse_genomes_project 10 61262372 61368611 + MGP_CBAJ_P0024917 Pkib protein_coding protein_coding MGP_CBAJ_T0024918.1 MGP_CBAJ_G0016972.1 mouse_genomes_project 10 61262423 61368611 + MGP_CBAJ_P0024918 Pkib protein_coding protein_coding MGP_CBAJ_T0024919.1 MGP_CBAJ_G0016972.1 mouse_genomes_project 10 61267430 61369324 + MGP_CBAJ_P0024919 Pkib protein_coding protein_coding MGP_CBAJ_T0024920.1 MGP_CBAJ_G0016972.1 mouse_genomes_project 10 61267443 61368612 + MGP_CBAJ_P0024920 Pkib protein_coding protein_coding MGP_CBAJ_T0024921.1 MGP_CBAJ_G0016972.1 mouse_genomes_project 10 61360221 61368682 + Pkib protein_coding processed_transcript MGP_CBAJ_T0009464.1 MGP_CBAJ_G0007602.1 mouse_genomes_project 10 62349037 62349241 + Gm27672 miRNA miRNA MGP_CBAJ_T0000803.1 MGP_CBAJ_G0000739.1 mouse_genomes_project 10 133360395 133361152 + TEC TEC MGP_CBAJ_T0027084.1 MGP_CBAJ_G0017561.1 mouse_genomes_project 10 141208481 141214271 - MGP_CBAJ_P0027084 Nab2 protein_coding protein_coding MGP_CBAJ_T0027085.1 MGP_CBAJ_G0017561.1 mouse_genomes_project 10 141208484 141214193 - MGP_CBAJ_P0027085 Nab2 protein_coding protein_coding MGP_CBAJ_T0027086.1 MGP_CBAJ_G0017561.1 mouse_genomes_project 10 141212485 141213042 - MGP_CBAJ_P0027086 Nab2 protein_coding protein_coding MGP_CBAJ_T0027087.1 MGP_CBAJ_G0017561.1 mouse_genomes_project 10 141212544 141219964 - MGP_CBAJ_P0027087 Nab2 protein_coding protein_coding MGP_CBAJ_T0024852.1 MGP_CBAJ_G0016946.1 mouse_genomes_project 10 54454732 54491434 + MGP_CBAJ_P0024852 Lilrb4a protein_coding protein_coding MGP_CBAJ_T0024853.1 MGP_CBAJ_G0016946.1 mouse_genomes_project 10 54454732 54491418 + MGP_CBAJ_P0024853 Lilrb4a protein_coding protein_coding MGP_CBAJ_T0024856.1 MGP_CBAJ_G0016946.1 mouse_genomes_project 10 54467669 54491434 + MGP_CBAJ_P0024856 Lilrb4a protein_coding protein_coding MGP_CBAJ_T0024334.1 MGP_CBAJ_G0016763.1 mouse_genomes_project 10 12996310 12998902 - MGP_CBAJ_P0024334 Gje1 protein_coding protein_coding MGP_CBAJ_T0097748.1 MGP_CBAJ_G0036021.1 mouse_genomes_project 10 68387126 68387491 + pseudogene pseudogene MGP_CBAJ_T0026386.1 MGP_CBAJ_G0017352.1 mouse_genomes_project 10 95278825 95281669 - MGP_CBAJ_P0026386 Ascl1 protein_coding protein_coding MGP_CBAJ_T0026773.1 MGP_CBAJ_G0017462.1 mouse_genomes_project 10 123484346 123673779 + MGP_CBAJ_P0026773 Kcnc2 protein_coding unknown_likely_coding MGP_CBAJ_T0026003.1 MGP_CBAJ_G0017249.1 mouse_genomes_project 10 87401930 87418486 - MGP_CBAJ_P0026003 Mob3a protein_coding protein_coding MGP_CBAJ_T0000800.1 MGP_CBAJ_G0000736.1 mouse_genomes_project 10 131127770 131130487 + TEC TEC MGP_CBAJ_T0024261.1 MGP_CBAJ_G0016749.1 mouse_genomes_project 10 10994428 11023627 - MGP_CBAJ_P0024261 Stx11 protein_coding protein_coding MGP_CBAJ_T0024262.1 MGP_CBAJ_G0016749.1 mouse_genomes_project 10 10994428 11023627 - MGP_CBAJ_P0024262 Stx11 protein_coding protein_coding MGP_CBAJ_T0098619.1 MGP_CBAJ_G0036874.1 mouse_genomes_project 10 46945673 46945788 + Gm22503 snRNA snRNA MGP_CBAJ_T0089797.1 MGP_CBAJ_G0033720.1 mouse_genomes_project 8 115736435 115746747 - MGP_CBAJ_P0089797 Cenpt protein_coding protein_coding MGP_CBAJ_T0009010.1 MGP_CBAJ_G0007237.1 mouse_genomes_project 8 76701126 76722605 - lincRNA lincRNA MGP_CBAJ_T0011594.1 MGP_CBAJ_G0009732.1 mouse_genomes_project 8 86718334 86718509 + Gm27820 misc_RNA misc_RNA MGP_CBAJ_T0005305.1 MGP_CBAJ_G0004490.1 mouse_genomes_project 8 120358349 120366756 - Gm17344 antisense antisense MGP_CBAJ_T0005306.1 MGP_CBAJ_G0004490.1 mouse_genomes_project 8 120360090 120366779 - Gm17344 antisense antisense MGP_CBAJ_T0008967.1 MGP_CBAJ_G0007202.1 mouse_genomes_project 8 9410522 9412835 + E230013L22Rik lincRNA lincRNA MGP_CBAJ_T0090120.1 MGP_CBAJ_G0033834.1 mouse_genomes_project 8 129528286 129598203 + MGP_CBAJ_P0090120 Hsd17b2 protein_coding protein_coding MGP_CBAJ_T0088601.1 MGP_CBAJ_G0033336.1 mouse_genomes_project 8 74842824 74843211 - MGP_CBAJ_P0088601 protein_coding protein_coding MGP_CBAJ_T0089777.1 MGP_CBAJ_G0033710.1 mouse_genomes_project 8 115465377 115482146 + MGP_CBAJ_P0089777 Fam65a protein_coding protein_coding MGP_CBAJ_T0015724.1 MGP_CBAJ_G0013836.1 mouse_genomes_project 8 18475472 18475992 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015731.1 MGP_CBAJ_G0013843.1 mouse_genomes_project 8 21755478 21755769 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0089268.1 MGP_CBAJ_G0033541.1 mouse_genomes_project 8 92155667 92158577 + MGP_CBAJ_P0089268 Dnase2a protein_coding protein_coding MGP_CBAJ_T0089269.1 MGP_CBAJ_G0033541.1 mouse_genomes_project 8 92155667 92158816 + MGP_CBAJ_P0089269 Dnase2a protein_coding protein_coding MGP_CBAJ_T0089270.1 MGP_CBAJ_G0033541.1 mouse_genomes_project 8 92155754 92156308 + Dnase2a protein_coding retained_intron MGP_CBAJ_T0089271.1 MGP_CBAJ_G0033541.1 mouse_genomes_project 8 92155754 92156576 + Dnase2a protein_coding retained_intron MGP_CBAJ_T0089272.1 MGP_CBAJ_G0033541.1 mouse_genomes_project 8 92155797 92157033 + MGP_CBAJ_P0089272 Dnase2a protein_coding protein_coding MGP_CBAJ_T0089273.1 MGP_CBAJ_G0033541.1 mouse_genomes_project 8 92155828 92161585 + Dnase2a protein_coding processed_transcript MGP_CBAJ_T0089274.1 MGP_CBAJ_G0033541.1 mouse_genomes_project 8 92155838 92157072 + MGP_CBAJ_P0089274 Dnase2a protein_coding protein_coding MGP_CBAJ_T0089275.1 MGP_CBAJ_G0033541.1 mouse_genomes_project 8 92156942 92158569 + Dnase2a protein_coding processed_transcript MGP_CBAJ_T0089280.1 MGP_CBAJ_G0033541.1 mouse_genomes_project 8 92160498 92169980 + Dnase2a protein_coding processed_transcript MGP_CBAJ_T0089670.1 MGP_CBAJ_G0033668.1 mouse_genomes_project 8 114030196 114038893 + MGP_CBAJ_P0089670 Cmtm3 protein_coding unknown_likely_coding MGP_CBAJ_T0088122.1 MGP_CBAJ_G0033195.1 mouse_genomes_project 8 34800174 34970311 - MGP_CBAJ_P0088122 Rbpms protein_coding protein_coding MGP_CBAJ_T0088123.1 MGP_CBAJ_G0033195.1 mouse_genomes_project 8 34800182 34970576 - MGP_CBAJ_P0088123 Rbpms protein_coding protein_coding MGP_CBAJ_T0088124.1 MGP_CBAJ_G0033195.1 mouse_genomes_project 8 34801589 34866261 - MGP_CBAJ_P0088124 Rbpms protein_coding nonsense_mediated_decay MGP_CBAJ_T0088125.1 MGP_CBAJ_G0033195.1 mouse_genomes_project 8 34801598 34825721 - MGP_CBAJ_P0088125 Rbpms protein_coding nonsense_mediated_decay MGP_CBAJ_T0088126.1 MGP_CBAJ_G0033195.1 mouse_genomes_project 8 34801601 34825684 - MGP_CBAJ_P0088126 Rbpms protein_coding nonsense_mediated_decay MGP_CBAJ_T0088127.1 MGP_CBAJ_G0033195.1 mouse_genomes_project 8 34801603 34875192 - Rbpms protein_coding processed_transcript MGP_CBAJ_T0088128.1 MGP_CBAJ_G0033195.1 mouse_genomes_project 8 34801609 34816159 - Rbpms protein_coding retained_intron MGP_CBAJ_T0088129.1 MGP_CBAJ_G0033195.1 mouse_genomes_project 8 34822826 34970575 - MGP_CBAJ_P0088129 Rbpms protein_coding protein_coding MGP_CBAJ_T0088130.1 MGP_CBAJ_G0033195.1 mouse_genomes_project 8 34825648 34921088 - MGP_CBAJ_P0088130 Rbpms protein_coding protein_coding MGP_CBAJ_T0088131.1 MGP_CBAJ_G0033195.1 mouse_genomes_project 8 34889272 34923090 - Rbpms protein_coding processed_transcript MGP_CBAJ_T0015780.1 MGP_CBAJ_G0013892.1 mouse_genomes_project 8 108045618 108048322 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0089788.1 MGP_CBAJ_G0033714.1 mouse_genomes_project 8 115565331 115567671 + MGP_CBAJ_P0089788 Pard6a protein_coding protein_coding MGP_CBAJ_T0089789.1 MGP_CBAJ_G0033714.1 mouse_genomes_project 8 115565824 115567670 + MGP_CBAJ_P0089789 Pard6a protein_coding protein_coding MGP_CBAJ_T0087958.1 MGP_CBAJ_G0033138.1 mouse_genomes_project 8 24520884 24540750 - MGP_CBAJ_P0087958 Adam3 protein_coding protein_coding MGP_CBAJ_T0087959.1 MGP_CBAJ_G0033138.1 mouse_genomes_project 8 24520891 24583433 - MGP_CBAJ_P0087959 Adam3 protein_coding protein_coding MGP_CBAJ_T0087960.1 MGP_CBAJ_G0033138.1 mouse_genomes_project 8 24520960 24583379 - MGP_CBAJ_P0087960 Adam3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087961.1 MGP_CBAJ_G0033138.1 mouse_genomes_project 8 24524413 24583369 - MGP_CBAJ_P0087961 Adam3 protein_coding protein_coding MGP_CBAJ_T0087962.1 MGP_CBAJ_G0033138.1 mouse_genomes_project 8 24562935 24583369 - MGP_CBAJ_P0087962 Adam3 protein_coding protein_coding MGP_CBAJ_T0087963.1 MGP_CBAJ_G0033138.1 mouse_genomes_project 8 24572034 24583366 - Adam3 protein_coding processed_transcript MGP_CBAJ_T0087964.1 MGP_CBAJ_G0033138.1 mouse_genomes_project 8 24572108 24583381 - Adam3 protein_coding processed_transcript MGP_CBAJ_T0087965.1 MGP_CBAJ_G0033138.1 mouse_genomes_project 8 24572109 24583406 - Adam3 protein_coding processed_transcript MGP_CBAJ_T0087966.1 MGP_CBAJ_G0033138.1 mouse_genomes_project 8 24572148 24583369 - MGP_CBAJ_P0087966 Adam3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087967.1 MGP_CBAJ_G0033138.1 mouse_genomes_project 8 24572173 24583363 - MGP_CBAJ_P0087967 Adam3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0098466.1 MGP_CBAJ_G0036727.1 mouse_genomes_project 8 132745906 132746978 + Gm26971 sense_intronic sense_intronic MGP_CBAJ_T0089070.1 MGP_CBAJ_G0033481.1 mouse_genomes_project 8 87313856 87339420 + MGP_CBAJ_P0089070 Gypa protein_coding protein_coding MGP_CBAJ_T0088625.1 MGP_CBAJ_G0033345.1 mouse_genomes_project 8 75353772 75362627 + MGP_CBAJ_P0088625 Lpar2 protein_coding protein_coding MGP_CBAJ_T0088626.1 MGP_CBAJ_G0033345.1 mouse_genomes_project 8 75353908 75362628 + MGP_CBAJ_P0088626 Lpar2 protein_coding protein_coding MGP_CBAJ_T0098099.1 MGP_CBAJ_G0036372.1 mouse_genomes_project 8 7262237 7262355 - n-R5s95 rRNA rRNA MGP_CBAJ_T0088043.1 MGP_CBAJ_G0033157.1 mouse_genomes_project 8 25972550 26008935 - MGP_CBAJ_P0088043 Hgsnat protein_coding protein_coding MGP_CBAJ_T0005284.1 MGP_CBAJ_G0004473.1 mouse_genomes_project 8 73753428 73757284 + 1700125H03Rik antisense antisense MGP_CBAJ_T0005285.1 MGP_CBAJ_G0004473.1 mouse_genomes_project 8 73753460 73760705 + 1700125H03Rik antisense antisense MGP_CBAJ_T0089807.1 MGP_CBAJ_G0033724.1 mouse_genomes_project 8 115788329 115789786 + MGP_CBAJ_P0089807 Nrn1l protein_coding protein_coding MGP_CBAJ_T0089808.1 MGP_CBAJ_G0033724.1 mouse_genomes_project 8 115788334 115789780 + MGP_CBAJ_P0089808 Nrn1l protein_coding protein_coding MGP_CBAJ_T0088104.1 MGP_CBAJ_G0033188.1 mouse_genomes_project 8 34414519 34415361 + MGP_CBAJ_P0088104 5930422O12Rik protein_coding protein_coding MGP_CBAJ_T0088243.1 MGP_CBAJ_G0033234.1 mouse_genomes_project 8 45925191 45967734 - MGP_CBAJ_P0088243 protein_coding protein_coding MGP_CBAJ_T0089771.1 MGP_CBAJ_G0033707.1 mouse_genomes_project 8 115366770 115371884 + MGP_CBAJ_P0089771 Hsd11b2 protein_coding protein_coding MGP_CBAJ_T0088145.1 MGP_CBAJ_G0033200.1 mouse_genomes_project 8 35419669 35422337 + MGP_CBAJ_P0088145 protein_coding protein_coding MGP_CBAJ_T0090513.1 MGP_CBAJ_G0033945.1 mouse_genomes_project 8 138743774 138759113 + Ntpcr protein_coding processed_transcript MGP_CBAJ_T0090514.1 MGP_CBAJ_G0033945.1 mouse_genomes_project 8 138743839 138761623 + MGP_CBAJ_P0090514 Ntpcr protein_coding protein_coding MGP_CBAJ_T0090515.1 MGP_CBAJ_G0033945.1 mouse_genomes_project 8 138743843 138751950 + Ntpcr protein_coding processed_transcript MGP_CBAJ_T0090516.1 MGP_CBAJ_G0033945.1 mouse_genomes_project 8 138746905 138761848 + Ntpcr protein_coding processed_transcript MGP_CBAJ_T0090517.1 MGP_CBAJ_G0033945.1 mouse_genomes_project 8 138748016 138762049 + MGP_CBAJ_P0090517 Ntpcr protein_coding protein_coding MGP_CBAJ_T0090518.1 MGP_CBAJ_G0033945.1 mouse_genomes_project 8 138748046 138750143 + Ntpcr protein_coding retained_intron MGP_CBAJ_T0090519.1 MGP_CBAJ_G0033945.1 mouse_genomes_project 8 138748051 138752993 + MGP_CBAJ_P0090519 Ntpcr protein_coding protein_coding MGP_CBAJ_T0090520.1 MGP_CBAJ_G0033945.1 mouse_genomes_project 8 138749648 138761811 + MGP_CBAJ_P0090520 Ntpcr protein_coding protein_coding MGP_CBAJ_T0089071.1 MGP_CBAJ_G0033482.1 mouse_genomes_project 8 87456543 87549653 + MGP_CBAJ_P0089071 Frem3 protein_coding protein_coding MGP_CBAJ_T0088850.1 MGP_CBAJ_G0033408.1 mouse_genomes_project 8 77123419 77131198 - Nr2f6 protein_coding processed_transcript MGP_CBAJ_T0088851.1 MGP_CBAJ_G0033408.1 mouse_genomes_project 8 77123423 77131252 - MGP_CBAJ_P0088851 Nr2f6 protein_coding protein_coding MGP_CBAJ_T0088852.1 MGP_CBAJ_G0033408.1 mouse_genomes_project 8 77123930 77125093 - Nr2f6 protein_coding processed_transcript MGP_CBAJ_T0088853.1 MGP_CBAJ_G0033408.1 mouse_genomes_project 8 77123955 77125093 - Nr2f6 protein_coding processed_transcript MGP_CBAJ_T0088854.1 MGP_CBAJ_G0033408.1 mouse_genomes_project 8 77124420 77125093 - Nr2f6 protein_coding processed_transcript MGP_CBAJ_T0088855.1 MGP_CBAJ_G0033408.1 mouse_genomes_project 8 77125054 77130201 - Nr2f6 protein_coding processed_transcript MGP_CBAJ_T0088856.1 MGP_CBAJ_G0033408.1 mouse_genomes_project 8 77125054 77130382 - MGP_CBAJ_P0088856 Nr2f6 protein_coding protein_coding MGP_CBAJ_T0088857.1 MGP_CBAJ_G0033408.1 mouse_genomes_project 8 77125121 77130469 - MGP_CBAJ_P0088857 Nr2f6 protein_coding protein_coding MGP_CBAJ_T0087710.1 MGP_CBAJ_G0033035.1 mouse_genomes_project 8 11156409 11166185 + MGP_CBAJ_P0087710 F7 protein_coding protein_coding MGP_CBAJ_T0089116.1 MGP_CBAJ_G0033499.1 mouse_genomes_project 8 90815687 90819666 + MGP_CBAJ_P0089116 Dnajb1 protein_coding protein_coding MGP_CBAJ_T0005256.1 MGP_CBAJ_G0004450.1 mouse_genomes_project 8 13366194 13370006 - 5830468F06Rik antisense antisense MGP_CBAJ_T0089813.1 MGP_CBAJ_G0033729.1 mouse_genomes_project 8 115845944 115871016 - MGP_CBAJ_P0089813 Slc12a4 protein_coding protein_coding MGP_CBAJ_T0089814.1 MGP_CBAJ_G0033729.1 mouse_genomes_project 8 115845944 115871087 - MGP_CBAJ_P0089814 Slc12a4 protein_coding protein_coding MGP_CBAJ_T0089815.1 MGP_CBAJ_G0033729.1 mouse_genomes_project 8 115849043 115850526 - Slc12a4 protein_coding retained_intron MGP_CBAJ_T0089816.1 MGP_CBAJ_G0033729.1 mouse_genomes_project 8 115856238 115869392 - MGP_CBAJ_P0089816 Slc12a4 protein_coding protein_coding MGP_CBAJ_T0089817.1 MGP_CBAJ_G0033729.1 mouse_genomes_project 8 115865425 115871046 - Slc12a4 protein_coding retained_intron MGP_CBAJ_T0098101.1 MGP_CBAJ_G0036374.1 mouse_genomes_project 8 37057975 37058089 + Gm22216 rRNA rRNA MGP_CBAJ_T0018192.1 MGP_CBAJ_G0015450.1 mouse_genomes_project 8 24899502 24904235 + Gm16933 processed_transcript processed_transcript MGP_CBAJ_T0089935.1 MGP_CBAJ_G0033769.1 mouse_genomes_project 8 120144981 120174328 - MGP_CBAJ_P0089935 Ist1 protein_coding protein_coding MGP_CBAJ_T0089960.1 MGP_CBAJ_G0033784.1 mouse_genomes_project 8 121364171 121384000 + MGP_CBAJ_P0089960 Mtss1l protein_coding protein_coding MGP_CBAJ_T0089961.1 MGP_CBAJ_G0033784.1 mouse_genomes_project 8 121364438 121381677 + MGP_CBAJ_P0089961 Mtss1l protein_coding protein_coding MGP_CBAJ_T0089962.1 MGP_CBAJ_G0033784.1 mouse_genomes_project 8 121369029 121374610 + Mtss1l protein_coding processed_transcript MGP_CBAJ_T0089963.1 MGP_CBAJ_G0033784.1 mouse_genomes_project 8 121369958 121380253 + MGP_CBAJ_P0089963 Mtss1l protein_coding protein_coding MGP_CBAJ_T0089964.1 MGP_CBAJ_G0033784.1 mouse_genomes_project 8 121369969 121380673 + MGP_CBAJ_P0089964 Mtss1l protein_coding protein_coding MGP_CBAJ_T0089965.1 MGP_CBAJ_G0033784.1 mouse_genomes_project 8 121379716 121380981 + Mtss1l protein_coding retained_intron MGP_CBAJ_T0010862.1 MGP_CBAJ_G0009000.1 mouse_genomes_project 8 91451984 91452089 + Mir24-2 miRNA miRNA MGP_CBAJ_T0089306.1 MGP_CBAJ_G0033546.1 mouse_genomes_project 8 92223309 92225150 - MGP_CBAJ_P0089306 Junb protein_coding protein_coding MGP_CBAJ_T0097851.1 MGP_CBAJ_G0036124.1 mouse_genomes_project 8 133474961 133476051 + pseudogene pseudogene MGP_CBAJ_T0088152.1 MGP_CBAJ_G0033206.1 mouse_genomes_project 8 37083962 37138444 + MGP_CBAJ_P0088152 unknown_likely_coding unknown_likely_coding MGP_CBAJ_T0089863.1 MGP_CBAJ_G0033747.1 mouse_genomes_project 8 116930981 116940710 - MGP_CBAJ_P0089863 protein_coding protein_coding MGP_CBAJ_T0089864.1 MGP_CBAJ_G0033747.1 mouse_genomes_project 8 116931008 116940710 - MGP_CBAJ_P0089864 protein_coding protein_coding MGP_CBAJ_T0089865.1 MGP_CBAJ_G0033747.1 mouse_genomes_project 8 116931012 116940332 - MGP_CBAJ_P0089865 protein_coding protein_coding MGP_CBAJ_T0089866.1 MGP_CBAJ_G0033747.1 mouse_genomes_project 8 116933063 116940708 - MGP_CBAJ_P0089866 protein_coding protein_coding MGP_CBAJ_T0089867.1 MGP_CBAJ_G0033747.1 mouse_genomes_project 8 116933162 116940632 - MGP_CBAJ_P0089867 protein_coding protein_coding MGP_CBAJ_T0089868.1 MGP_CBAJ_G0033747.1 mouse_genomes_project 8 116933239 116940718 - MGP_CBAJ_P0089868 protein_coding protein_coding MGP_CBAJ_T0089041.1 MGP_CBAJ_G0033469.1 mouse_genomes_project 8 84986798 84990434 - MGP_CBAJ_P0089041 Pou4f2 protein_coding protein_coding MGP_CBAJ_T0009101.1 MGP_CBAJ_G0007301.1 mouse_genomes_project 8 136456982 136466375 - 4732419C18Rik lincRNA lincRNA MGP_CBAJ_T0088114.1 MGP_CBAJ_G0033193.1 mouse_genomes_project 8 34736844 34792289 + MGP_CBAJ_P0088114 Gtf2e2 protein_coding protein_coding MGP_CBAJ_T0088115.1 MGP_CBAJ_G0033193.1 mouse_genomes_project 8 34737053 34792289 + MGP_CBAJ_P0088115 Gtf2e2 protein_coding protein_coding MGP_CBAJ_T0088116.1 MGP_CBAJ_G0033193.1 mouse_genomes_project 8 34737144 34763895 + MGP_CBAJ_P0088116 Gtf2e2 protein_coding protein_coding MGP_CBAJ_T0088117.1 MGP_CBAJ_G0033193.1 mouse_genomes_project 8 34737322 34744076 + MGP_CBAJ_P0088117 Gtf2e2 protein_coding protein_coding MGP_CBAJ_T0088118.1 MGP_CBAJ_G0033193.1 mouse_genomes_project 8 34737350 34792298 + MGP_CBAJ_P0088118 Gtf2e2 protein_coding protein_coding MGP_CBAJ_T0088119.1 MGP_CBAJ_G0033193.1 mouse_genomes_project 8 34738455 34769898 + MGP_CBAJ_P0088119 Gtf2e2 protein_coding protein_coding MGP_CBAJ_T0088121.1 MGP_CBAJ_G0033193.1 mouse_genomes_project 8 34779107 34791903 + Gtf2e2 protein_coding processed_transcript MGP_CBAJ_T0005298.1 MGP_CBAJ_G0004485.1 mouse_genomes_project 8 114390810 114401618 + antisense antisense MGP_CBAJ_T0005299.1 MGP_CBAJ_G0004485.1 mouse_genomes_project 8 114395706 114401478 + antisense antisense MGP_CBAJ_T0090217.1 MGP_CBAJ_G0033863.1 mouse_genomes_project 8 132922102 132928137 + MGP_CBAJ_P0090217 Cox4i1 protein_coding protein_coding MGP_CBAJ_T0090218.1 MGP_CBAJ_G0033863.1 mouse_genomes_project 8 132922105 132923743 + Cox4i1 protein_coding retained_intron MGP_CBAJ_T0090219.1 MGP_CBAJ_G0033863.1 mouse_genomes_project 8 132922180 132927969 + MGP_CBAJ_P0090219 Cox4i1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090220.1 MGP_CBAJ_G0033863.1 mouse_genomes_project 8 132926513 132928037 + Cox4i1 protein_coding retained_intron MGP_CBAJ_T0090221.1 MGP_CBAJ_G0033863.1 mouse_genomes_project 8 132927075 132928131 + Cox4i1 protein_coding retained_intron MGP_CBAJ_T0087861.1 MGP_CBAJ_G0033098.1 mouse_genomes_project 8 21311738 21312214 + MGP_CBAJ_P0087861 Defb2 protein_coding protein_coding MGP_CBAJ_T0009005.1 MGP_CBAJ_G0007233.1 mouse_genomes_project 8 70045911 70096125 - lincRNA lincRNA MGP_CBAJ_T0089985.1 MGP_CBAJ_G0033789.1 mouse_genomes_project 8 121607224 121667633 + MGP_CBAJ_P0089985 St3gal2 protein_coding protein_coding MGP_CBAJ_T0089986.1 MGP_CBAJ_G0033789.1 mouse_genomes_project 8 121607224 121664976 + MGP_CBAJ_P0089986 St3gal2 protein_coding protein_coding MGP_CBAJ_T0089987.1 MGP_CBAJ_G0033789.1 mouse_genomes_project 8 121607260 121652135 + St3gal2 protein_coding processed_transcript MGP_CBAJ_T0089988.1 MGP_CBAJ_G0033789.1 mouse_genomes_project 8 121622149 121652334 + St3gal2 protein_coding processed_transcript MGP_CBAJ_T0089989.1 MGP_CBAJ_G0033789.1 mouse_genomes_project 8 121631131 121652160 + St3gal2 protein_coding processed_transcript MGP_CBAJ_T0087860.1 MGP_CBAJ_G0033097.1 mouse_genomes_project 8 21273483 21279976 + MGP_CBAJ_P0087860 Defb50 protein_coding protein_coding MGP_CBAJ_T0089175.1 MGP_CBAJ_G0033522.1 mouse_genomes_project 8 91489450 91492567 - MGP_CBAJ_P0089175 D8Ertd738e protein_coding protein_coding MGP_CBAJ_T0005280.1 MGP_CBAJ_G0004469.1 mouse_genomes_project 8 66469877 66557798 + 4930512H18Rik antisense antisense MGP_CBAJ_T0089379.1 MGP_CBAJ_G0033570.1 mouse_genomes_project 8 94043926 94145537 + MGP_CBAJ_P0089379 Lonp2 protein_coding protein_coding MGP_CBAJ_T0089380.1 MGP_CBAJ_G0033570.1 mouse_genomes_project 8 94043926 94152780 + MGP_CBAJ_P0089380 Lonp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089381.1 MGP_CBAJ_G0033570.1 mouse_genomes_project 8 94043970 94072859 + Lonp2 protein_coding processed_transcript MGP_CBAJ_T0089382.1 MGP_CBAJ_G0033570.1 mouse_genomes_project 8 94043988 94145537 + MGP_CBAJ_P0089382 Lonp2 protein_coding protein_coding MGP_CBAJ_T0089383.1 MGP_CBAJ_G0033570.1 mouse_genomes_project 8 94062589 94096788 + Lonp2 protein_coding processed_transcript MGP_CBAJ_T0089384.1 MGP_CBAJ_G0033570.1 mouse_genomes_project 8 94082761 94145538 + MGP_CBAJ_P0089384 Lonp2 protein_coding protein_coding MGP_CBAJ_T0089385.1 MGP_CBAJ_G0033570.1 mouse_genomes_project 8 94082761 94145538 + MGP_CBAJ_P0089385 Lonp2 protein_coding protein_coding MGP_CBAJ_T0090137.1 MGP_CBAJ_G0033840.1 mouse_genomes_project 8 131490340 131516525 + MGP_CBAJ_P0090137 Necab2 protein_coding protein_coding MGP_CBAJ_T0090138.1 MGP_CBAJ_G0033840.1 mouse_genomes_project 8 131490382 131516296 + Necab2 protein_coding processed_transcript MGP_CBAJ_T0090139.1 MGP_CBAJ_G0033840.1 mouse_genomes_project 8 131496085 131514830 + MGP_CBAJ_P0090139 Necab2 protein_coding protein_coding MGP_CBAJ_T0015757.1 MGP_CBAJ_G0013869.1 mouse_genomes_project 8 83200704 83201617 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0090529.1 MGP_CBAJ_G0033949.1 mouse_genomes_project 8 139413401 139526758 + MGP_CBAJ_P0090529 Slc35f3 protein_coding protein_coding MGP_CBAJ_T0005323.1 MGP_CBAJ_G0004507.1 mouse_genomes_project 8 137105927 137107303 - 1810008B01Rik antisense antisense MGP_CBAJ_T0090045.1 MGP_CBAJ_G0033802.1 mouse_genomes_project 8 122570340 122575767 - MGP_CBAJ_P0090045 Ctrb1 protein_coding protein_coding MGP_CBAJ_T0005319.1 MGP_CBAJ_G0004503.1 mouse_genomes_project 8 134391138 134393130 + antisense antisense MGP_CBAJ_T0089697.1 MGP_CBAJ_G0033679.1 mouse_genomes_project 8 114596589 114605908 + MGP_CBAJ_P0089697 Ces2b protein_coding protein_coding MGP_CBAJ_T0089698.1 MGP_CBAJ_G0033679.1 mouse_genomes_project 8 114596618 114618957 + MGP_CBAJ_P0089698 Ces2b protein_coding nonsense_mediated_decay MGP_CBAJ_T0099561.1 MGP_CBAJ_G0037816.1 mouse_genomes_project 8 85646763 85646870 - Gm22044 snRNA snRNA MGP_CBAJ_T0089080.1 MGP_CBAJ_G0033486.1 mouse_genomes_project 8 88286290 88713910 + MGP_CBAJ_P0089080 Inpp4b protein_coding protein_coding MGP_CBAJ_T0089081.1 MGP_CBAJ_G0033486.1 mouse_genomes_project 8 88286292 89085458 + MGP_CBAJ_P0089081 Inpp4b protein_coding protein_coding MGP_CBAJ_T0089082.1 MGP_CBAJ_G0033486.1 mouse_genomes_project 8 88286296 89140892 + MGP_CBAJ_P0089082 Inpp4b protein_coding protein_coding MGP_CBAJ_T0089083.1 MGP_CBAJ_G0033486.1 mouse_genomes_project 8 88286296 89141124 + MGP_CBAJ_P0089083 Inpp4b protein_coding nonsense_mediated_decay MGP_CBAJ_T0089084.1 MGP_CBAJ_G0033486.1 mouse_genomes_project 8 88286296 89143376 + MGP_CBAJ_P0089084 Inpp4b protein_coding protein_coding MGP_CBAJ_T0089085.1 MGP_CBAJ_G0033486.1 mouse_genomes_project 8 88684323 89140897 + MGP_CBAJ_P0089085 Inpp4b protein_coding protein_coding MGP_CBAJ_T0089086.1 MGP_CBAJ_G0033486.1 mouse_genomes_project 8 88739112 88800756 + Inpp4b protein_coding processed_transcript MGP_CBAJ_T0089087.1 MGP_CBAJ_G0033486.1 mouse_genomes_project 8 88742021 88884242 + Inpp4b protein_coding processed_transcript MGP_CBAJ_T0089088.1 MGP_CBAJ_G0033486.1 mouse_genomes_project 8 88749235 89085458 + MGP_CBAJ_P0089088 Inpp4b protein_coding protein_coding MGP_CBAJ_T0089089.1 MGP_CBAJ_G0033486.1 mouse_genomes_project 8 88835401 88950866 + Inpp4b protein_coding processed_transcript MGP_CBAJ_T0089090.1 MGP_CBAJ_G0033486.1 mouse_genomes_project 8 88856422 89140906 + MGP_CBAJ_P0089090 Inpp4b protein_coding protein_coding MGP_CBAJ_T0089091.1 MGP_CBAJ_G0033486.1 mouse_genomes_project 8 88890333 88902883 + Inpp4b protein_coding processed_transcript MGP_CBAJ_T0005282.1 MGP_CBAJ_G0004471.1 mouse_genomes_project 8 71564336 71567683 - Gm15356 antisense antisense MGP_CBAJ_T0089417.1 MGP_CBAJ_G0033581.1 mouse_genomes_project 8 95925098 95926987 - Brd7 protein_coding processed_transcript MGP_CBAJ_T0089418.1 MGP_CBAJ_G0033581.1 mouse_genomes_project 8 95925107 95956207 - MGP_CBAJ_P0089418 Brd7 protein_coding protein_coding MGP_CBAJ_T0089419.1 MGP_CBAJ_G0033581.1 mouse_genomes_project 8 95926854 95927991 - Brd7 protein_coding processed_transcript MGP_CBAJ_T0089420.1 MGP_CBAJ_G0033581.1 mouse_genomes_project 8 95926873 95929555 - Brd7 protein_coding retained_intron MGP_CBAJ_T0089421.1 MGP_CBAJ_G0033581.1 mouse_genomes_project 8 95926953 95936912 - Brd7 protein_coding processed_transcript MGP_CBAJ_T0089422.1 MGP_CBAJ_G0033581.1 mouse_genomes_project 8 95927618 95936834 - Brd7 protein_coding processed_transcript MGP_CBAJ_T0089423.1 MGP_CBAJ_G0033581.1 mouse_genomes_project 8 95951552 95956029 - Brd7 protein_coding processed_transcript MGP_CBAJ_T0087893.1 MGP_CBAJ_G0033117.1 mouse_genomes_project 8 22029726 22043992 - MGP_CBAJ_P0087893 Smim19 protein_coding protein_coding MGP_CBAJ_T0087894.1 MGP_CBAJ_G0033117.1 mouse_genomes_project 8 22029726 22043992 - MGP_CBAJ_P0087894 Smim19 protein_coding protein_coding MGP_CBAJ_T0089154.1 MGP_CBAJ_G0033510.1 mouse_genomes_project 8 91262499 91270127 + Palm3 protein_coding retained_intron MGP_CBAJ_T0089155.1 MGP_CBAJ_G0033510.1 mouse_genomes_project 8 91262499 91271234 + MGP_CBAJ_P0089155 Palm3 protein_coding protein_coding MGP_CBAJ_T0089156.1 MGP_CBAJ_G0033510.1 mouse_genomes_project 8 91267086 91268061 + Palm3 protein_coding retained_intron MGP_CBAJ_T0008965.1 MGP_CBAJ_G0007201.1 mouse_genomes_project 8 8893867 8946195 + 9530052E02Rik lincRNA lincRNA MGP_CBAJ_T0008966.1 MGP_CBAJ_G0007201.1 mouse_genomes_project 8 8941240 8946200 + 9530052E02Rik lincRNA lincRNA MGP_CBAJ_T0089435.1 MGP_CBAJ_G0033587.1 mouse_genomes_project 8 98034933 98140129 - MGP_CBAJ_P0089435 Tox3 protein_coding protein_coding MGP_CBAJ_T0089436.1 MGP_CBAJ_G0033587.1 mouse_genomes_project 8 98040595 98139917 - MGP_CBAJ_P0089436 Tox3 protein_coding protein_coding MGP_CBAJ_T0089437.1 MGP_CBAJ_G0033587.1 mouse_genomes_project 8 98047704 98139912 - MGP_CBAJ_P0089437 Tox3 protein_coding protein_coding MGP_CBAJ_T0008963.1 MGP_CBAJ_G0007199.1 mouse_genomes_project 8 4839603 4891784 + Gm17215 lincRNA lincRNA MGP_CBAJ_T0087808.1 MGP_CBAJ_G0033068.1 mouse_genomes_project 8 13410459 13484149 + MGP_CBAJ_P0087808 Myom2 protein_coding protein_coding MGP_CBAJ_T0087809.1 MGP_CBAJ_G0033068.1 mouse_genomes_project 8 13411594 13416559 + Myom2 protein_coding processed_transcript MGP_CBAJ_T0087810.1 MGP_CBAJ_G0033068.1 mouse_genomes_project 8 13412809 13426503 + Myom2 protein_coding retained_intron MGP_CBAJ_T0087811.1 MGP_CBAJ_G0033068.1 mouse_genomes_project 8 13457170 13459687 + Myom2 protein_coding retained_intron MGP_CBAJ_T0087812.1 MGP_CBAJ_G0033068.1 mouse_genomes_project 8 13469649 13481769 + Myom2 protein_coding processed_transcript MGP_CBAJ_T0097844.1 MGP_CBAJ_G0036117.1 mouse_genomes_project 8 86387347 86387906 - pseudogene pseudogene MGP_CBAJ_T0088518.1 MGP_CBAJ_G0033310.1 mouse_genomes_project 8 69685918 69801650 - MGP_CBAJ_P0088518 Klhl2 protein_coding protein_coding MGP_CBAJ_T0088375.1 MGP_CBAJ_G0033271.1 mouse_genomes_project 8 50743754 50923827 - MGP_CBAJ_P0088375 Wwc2 protein_coding protein_coding MGP_CBAJ_T0098098.1 MGP_CBAJ_G0036371.1 mouse_genomes_project 8 2505685 2505804 - n-R5s94 rRNA rRNA MGP_CBAJ_T0100837.1 MGP_CBAJ_G0039092.1 mouse_genomes_project 8 124697901 124698032 - Gm25766 snoRNA snoRNA MGP_CBAJ_T0088244.1 MGP_CBAJ_G0033235.1 mouse_genomes_project 8 46031936 46037305 - MGP_CBAJ_P0088244 protein_coding protein_coding MGP_CBAJ_T0089013.1 MGP_CBAJ_G0033462.1 mouse_genomes_project 8 81657588 82226095 + MGP_CBAJ_P0089013 1700007B14Rik protein_coding protein_coding MGP_CBAJ_T0089014.1 MGP_CBAJ_G0033462.1 mouse_genomes_project 8 81657877 82226120 + MGP_CBAJ_P0089014 1700007B14Rik protein_coding protein_coding MGP_CBAJ_T0099546.1 MGP_CBAJ_G0037801.1 mouse_genomes_project 8 48980578 48980675 + Gm24669 snRNA snRNA MGP_CBAJ_T0005287.1 MGP_CBAJ_G0004475.1 mouse_genomes_project 8 74480736 74497950 + Gm15716 antisense antisense MGP_CBAJ_T0098097.1 MGP_CBAJ_G0036370.1 mouse_genomes_project 8 2204984 2205103 - n-R5s93 rRNA rRNA MGP_CBAJ_T0088372.1 MGP_CBAJ_G0033268.1 mouse_genomes_project 8 50596995 50598751 + MGP_CBAJ_P0088372 protein_coding protein_coding MGP_CBAJ_T0087622.1 MGP_CBAJ_G0033010.1 mouse_genomes_project 8 6266351 6269952 + MGP_CBAJ_P0087622 protein_coding protein_coding MGP_CBAJ_T0089618.1 MGP_CBAJ_G0033647.1 mouse_genomes_project 8 103718420 103732774 - MGP_CBAJ_P0089618 Cfap20 protein_coding protein_coding MGP_CBAJ_T0088919.1 MGP_CBAJ_G0033428.1 mouse_genomes_project 8 77494907 77496270 + MGP_CBAJ_P0088919 Insl3 protein_coding protein_coding MGP_CBAJ_T0090462.1 MGP_CBAJ_G0033927.1 mouse_genomes_project 8 137175669 137198655 - MGP_CBAJ_P0090462 Pgbd5 protein_coding unknown_likely_coding MGP_CBAJ_T0090463.1 MGP_CBAJ_G0033927.1 mouse_genomes_project 8 137175674 137257515 - MGP_CBAJ_P0090463 Pgbd5 protein_coding protein_coding MGP_CBAJ_T0090464.1 MGP_CBAJ_G0033927.1 mouse_genomes_project 8 137175678 137248939 - MGP_CBAJ_P0090464 Pgbd5 protein_coding protein_coding MGP_CBAJ_T0090465.1 MGP_CBAJ_G0033927.1 mouse_genomes_project 8 137182237 137187846 - Pgbd5 protein_coding processed_transcript MGP_CBAJ_T0090466.1 MGP_CBAJ_G0033927.1 mouse_genomes_project 8 137182253 137187411 - Pgbd5 protein_coding retained_intron MGP_CBAJ_T0088460.1 MGP_CBAJ_G0033298.1 mouse_genomes_project 8 65395422 65407525 - Clcn3 protein_coding processed_transcript MGP_CBAJ_T0088461.1 MGP_CBAJ_G0033298.1 mouse_genomes_project 8 65395859 65448848 - MGP_CBAJ_P0088461 Clcn3 protein_coding protein_coding MGP_CBAJ_T0088462.1 MGP_CBAJ_G0033298.1 mouse_genomes_project 8 65396458 65448975 - MGP_CBAJ_P0088462 Clcn3 protein_coding protein_coding MGP_CBAJ_T0088463.1 MGP_CBAJ_G0033298.1 mouse_genomes_project 8 65396485 65449460 - Clcn3 protein_coding retained_intron MGP_CBAJ_T0088464.1 MGP_CBAJ_G0033298.1 mouse_genomes_project 8 65396485 65477368 - MGP_CBAJ_P0088464 Clcn3 protein_coding protein_coding MGP_CBAJ_T0088465.1 MGP_CBAJ_G0033298.1 mouse_genomes_project 8 65396485 65477368 - MGP_CBAJ_P0088465 Clcn3 protein_coding protein_coding MGP_CBAJ_T0088466.1 MGP_CBAJ_G0033298.1 mouse_genomes_project 8 65412849 65449006 - Clcn3 protein_coding retained_intron MGP_CBAJ_T0088467.1 MGP_CBAJ_G0033298.1 mouse_genomes_project 8 65419844 65477373 - Clcn3 protein_coding retained_intron MGP_CBAJ_T0088468.1 MGP_CBAJ_G0033298.1 mouse_genomes_project 8 65422968 65477415 - Clcn3 protein_coding retained_intron MGP_CBAJ_T0089236.1 MGP_CBAJ_G0033531.1 mouse_genomes_project 8 91970608 91974448 + MGP_CBAJ_P0089236 G430095P16Rik protein_coding protein_coding MGP_CBAJ_T0089142.1 MGP_CBAJ_G0033505.1 mouse_genomes_project 8 91199853 91203281 + protein_coding retained_intron MGP_CBAJ_T0089752.1 MGP_CBAJ_G0033701.1 mouse_genomes_project 8 115175587 115203735 + MGP_CBAJ_P0089752 Slc9a5 protein_coding protein_coding MGP_CBAJ_T0090279.1 MGP_CBAJ_G0033877.1 mouse_genomes_project 8 134444196 134496417 + MGP_CBAJ_P0090279 Banp protein_coding protein_coding MGP_CBAJ_T0090280.1 MGP_CBAJ_G0033877.1 mouse_genomes_project 8 134444938 134527965 + MGP_CBAJ_P0090280 Banp protein_coding protein_coding MGP_CBAJ_T0090281.1 MGP_CBAJ_G0033877.1 mouse_genomes_project 8 134444990 134531046 + MGP_CBAJ_P0090281 Banp protein_coding protein_coding MGP_CBAJ_T0090282.1 MGP_CBAJ_G0033877.1 mouse_genomes_project 8 134445021 134496415 + MGP_CBAJ_P0090282 Banp protein_coding nonsense_mediated_decay MGP_CBAJ_T0090283.1 MGP_CBAJ_G0033877.1 mouse_genomes_project 8 134445026 134527725 + MGP_CBAJ_P0090283 Banp protein_coding protein_coding MGP_CBAJ_T0090284.1 MGP_CBAJ_G0033877.1 mouse_genomes_project 8 134445031 134490803 + MGP_CBAJ_P0090284 Banp protein_coding protein_coding MGP_CBAJ_T0090285.1 MGP_CBAJ_G0033877.1 mouse_genomes_project 8 134445042 134490794 + MGP_CBAJ_P0090285 Banp protein_coding nonsense_mediated_decay MGP_CBAJ_T0090286.1 MGP_CBAJ_G0033877.1 mouse_genomes_project 8 134445051 134490820 + MGP_CBAJ_P0090286 Banp protein_coding protein_coding MGP_CBAJ_T0090287.1 MGP_CBAJ_G0033877.1 mouse_genomes_project 8 134473795 134476057 + Banp protein_coding retained_intron MGP_CBAJ_T0090288.1 MGP_CBAJ_G0033877.1 mouse_genomes_project 8 134473843 134527423 + MGP_CBAJ_P0090288 Banp protein_coding protein_coding MGP_CBAJ_T0090289.1 MGP_CBAJ_G0033877.1 mouse_genomes_project 8 134477891 134489236 + Banp protein_coding retained_intron MGP_CBAJ_T0090290.1 MGP_CBAJ_G0033877.1 mouse_genomes_project 8 134490691 134496472 + Banp protein_coding retained_intron MGP_CBAJ_T0090291.1 MGP_CBAJ_G0033877.1 mouse_genomes_project 8 134490837 134527746 + MGP_CBAJ_P0090291 Banp protein_coding protein_coding MGP_CBAJ_T0090292.1 MGP_CBAJ_G0033877.1 mouse_genomes_project 8 134496322 134527395 + MGP_CBAJ_P0090292 Banp protein_coding protein_coding MGP_CBAJ_T0090293.1 MGP_CBAJ_G0033877.1 mouse_genomes_project 8 134499902 134522437 + Banp protein_coding processed_transcript MGP_CBAJ_T0090294.1 MGP_CBAJ_G0033877.1 mouse_genomes_project 8 134500080 134509012 + Banp protein_coding retained_intron MGP_CBAJ_T0088610.1 MGP_CBAJ_G0033340.1 mouse_genomes_project 8 75273250 75281510 - MGP_CBAJ_P0088610 Zfp963 protein_coding protein_coding MGP_CBAJ_T0088612.1 MGP_CBAJ_G0033340.1 mouse_genomes_project 8 75274545 75281518 - MGP_CBAJ_P0088612 Zfp963 protein_coding protein_coding MGP_CBAJ_T0087879.1 MGP_CBAJ_G0033110.1 mouse_genomes_project 8 21642436 21677042 - MGP_CBAJ_P0087879 Nek3 protein_coding protein_coding MGP_CBAJ_T0087880.1 MGP_CBAJ_G0033110.1 mouse_genomes_project 8 21642436 21677065 - MGP_CBAJ_P0087880 Nek3 protein_coding protein_coding MGP_CBAJ_T0087881.1 MGP_CBAJ_G0033110.1 mouse_genomes_project 8 21642439 21673020 - MGP_CBAJ_P0087881 Nek3 protein_coding protein_coding MGP_CBAJ_T0087882.1 MGP_CBAJ_G0033110.1 mouse_genomes_project 8 21642839 21646457 - Nek3 protein_coding retained_intron MGP_CBAJ_T0015768.1 MGP_CBAJ_G0013880.1 mouse_genomes_project 8 90516872 90517348 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0089474.1 MGP_CBAJ_G0033599.1 mouse_genomes_project 8 100937129 100938130 + MGP_CBAJ_P0089474 Capns2 protein_coding protein_coding MGP_CBAJ_T0005255.1 MGP_CBAJ_G0004449.1 mouse_genomes_project 8 13311338 13311859 - Gm16350 antisense antisense MGP_CBAJ_T0089596.1 MGP_CBAJ_G0033641.1 mouse_genomes_project 8 103388165 103424383 - MGP_CBAJ_P0089596 Kifc3 protein_coding protein_coding MGP_CBAJ_T0089597.1 MGP_CBAJ_G0033641.1 mouse_genomes_project 8 103388171 103424448 - MGP_CBAJ_P0089597 Kifc3 protein_coding protein_coding MGP_CBAJ_T0099554.1 MGP_CBAJ_G0037809.1 mouse_genomes_project 8 71058369 71058476 - Gm24205 snRNA snRNA MGP_CBAJ_T0002291.1 MGP_CBAJ_G0002205.1 mouse_genomes_project 8 22855146 22855997 + TEC TEC MGP_CBAJ_T0008991.1 MGP_CBAJ_G0007219.1 mouse_genomes_project 8 35136490 35137745 + Gm26768 lincRNA lincRNA MGP_CBAJ_T0089166.1 MGP_CBAJ_G0033518.1 mouse_genomes_project 8 91376886 91391878 - MGP_CBAJ_P0089166 Cc2d1a protein_coding protein_coding MGP_CBAJ_T0089167.1 MGP_CBAJ_G0033518.1 mouse_genomes_project 8 91376886 91391949 - MGP_CBAJ_P0089167 Cc2d1a protein_coding protein_coding MGP_CBAJ_T0089168.1 MGP_CBAJ_G0033518.1 mouse_genomes_project 8 91376895 91380869 - Cc2d1a protein_coding retained_intron MGP_CBAJ_T0089169.1 MGP_CBAJ_G0033518.1 mouse_genomes_project 8 91390467 91391910 - Cc2d1a protein_coding processed_transcript MGP_CBAJ_T0015754.1 MGP_CBAJ_G0013866.1 mouse_genomes_project 8 79834277 79837204 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0087627.1 MGP_CBAJ_G0033014.1 mouse_genomes_project 8 7727539 7741988 + MGP_CBAJ_P0087627 Abhd13 protein_coding protein_coding MGP_CBAJ_T0087628.1 MGP_CBAJ_G0033014.1 mouse_genomes_project 8 7727549 7741988 + MGP_CBAJ_P0087628 Abhd13 protein_coding protein_coding MGP_CBAJ_T0008969.1 MGP_CBAJ_G0007204.1 mouse_genomes_project 8 10337461 10337863 + Gm29175 lincRNA lincRNA MGP_CBAJ_T0089108.1 MGP_CBAJ_G0033495.1 mouse_genomes_project 8 90567974 90628511 + MGP_CBAJ_P0089108 Clgn protein_coding protein_coding MGP_CBAJ_T0089109.1 MGP_CBAJ_G0033495.1 mouse_genomes_project 8 90567985 90626790 + MGP_CBAJ_P0089109 Clgn protein_coding protein_coding MGP_CBAJ_T0009071.1 MGP_CBAJ_G0007278.1 mouse_genomes_project 8 116239229 116263011 + Gm10629 lincRNA lincRNA MGP_CBAJ_T0087915.1 MGP_CBAJ_G0033125.1 mouse_genomes_project 8 22460835 22563498 + MGP_CBAJ_P0087915 Kat6a protein_coding protein_coding MGP_CBAJ_T0087916.1 MGP_CBAJ_G0033125.1 mouse_genomes_project 8 22460849 22563498 + MGP_CBAJ_P0087916 Kat6a protein_coding protein_coding MGP_CBAJ_T0087917.1 MGP_CBAJ_G0033125.1 mouse_genomes_project 8 22525614 22535430 + Kat6a protein_coding processed_transcript MGP_CBAJ_T0087871.1 MGP_CBAJ_G0033107.1 mouse_genomes_project 8 21495305 21578114 - MGP_CBAJ_P0087871 Atp7b protein_coding protein_coding MGP_CBAJ_T0087872.1 MGP_CBAJ_G0033107.1 mouse_genomes_project 8 21497174 21577828 - MGP_CBAJ_P0087872 Atp7b protein_coding protein_coding MGP_CBAJ_T0087865.1 MGP_CBAJ_G0033102.1 mouse_genomes_project 8 21416465 21419377 - MGP_CBAJ_P0087865 Defb15 protein_coding protein_coding MGP_CBAJ_T0089388.1 MGP_CBAJ_G0033573.1 mouse_genomes_project 8 94288185 94332117 - MGP_CBAJ_P0089388 N4bp1 protein_coding protein_coding MGP_CBAJ_T0089000.1 MGP_CBAJ_G0033457.1 mouse_genomes_project 8 81119744 81162322 + MGP_CBAJ_P0089000 Hmgxb4 protein_coding protein_coding MGP_CBAJ_T0089001.1 MGP_CBAJ_G0033457.1 mouse_genomes_project 8 81120067 81162328 + MGP_CBAJ_P0089001 Hmgxb4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089002.1 MGP_CBAJ_G0033457.1 mouse_genomes_project 8 81120079 81125609 + Hmgxb4 protein_coding processed_transcript MGP_CBAJ_T0089003.1 MGP_CBAJ_G0033457.1 mouse_genomes_project 8 81146478 81162263 + MGP_CBAJ_P0089003 Hmgxb4 protein_coding protein_coding MGP_CBAJ_T0089004.1 MGP_CBAJ_G0033457.1 mouse_genomes_project 8 81153111 81154333 + Hmgxb4 protein_coding retained_intron MGP_CBAJ_T0100818.1 MGP_CBAJ_G0039073.1 mouse_genomes_project 8 82270452 82270579 - Gm22544 snoRNA snoRNA MGP_CBAJ_T0089158.1 MGP_CBAJ_G0033512.1 mouse_genomes_project 8 91286261 91288341 - MGP_CBAJ_P0089158 Rln3 protein_coding protein_coding MGP_CBAJ_T0098108.1 MGP_CBAJ_G0036381.1 mouse_genomes_project 8 82929449 82929577 - Gm27355 rRNA rRNA MGP_CBAJ_T0015713.1 MGP_CBAJ_G0013825.1 mouse_genomes_project 8 1933803 1934199 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005286.1 MGP_CBAJ_G0004474.1 mouse_genomes_project 8 73848838 73850373 + Gm15656 antisense antisense MGP_CBAJ_T0089044.1 MGP_CBAJ_G0033472.1 mouse_genomes_project 8 85422082 85438292 - MGP_CBAJ_P0089044 Lsm6 protein_coding protein_coding MGP_CBAJ_T0089045.1 MGP_CBAJ_G0033472.1 mouse_genomes_project 8 85423668 85438292 - MGP_CBAJ_P0089045 Lsm6 protein_coding protein_coding MGP_CBAJ_T0089046.1 MGP_CBAJ_G0033472.1 mouse_genomes_project 8 85425254 85427428 - Lsm6 protein_coding retained_intron MGP_CBAJ_T0089047.1 MGP_CBAJ_G0033472.1 mouse_genomes_project 8 85425275 85430432 - Lsm6 protein_coding retained_intron MGP_CBAJ_T0099579.1 MGP_CBAJ_G0037834.1 mouse_genomes_project 8 134295100 134295207 + Gm24283 snRNA snRNA MGP_CBAJ_T0090024.1 MGP_CBAJ_G0033798.1 mouse_genomes_project 8 122262850 122358543 - MGP_CBAJ_P0090024 Wdr59 protein_coding protein_coding MGP_CBAJ_T0090025.1 MGP_CBAJ_G0033798.1 mouse_genomes_project 8 122262850 122358543 - MGP_CBAJ_P0090025 Wdr59 protein_coding protein_coding MGP_CBAJ_T0088978.1 MGP_CBAJ_G0033448.1 mouse_genomes_project 8 78456779 78472015 - MGP_CBAJ_P0088978 Slc35e1 protein_coding protein_coding MGP_CBAJ_T0088979.1 MGP_CBAJ_G0033448.1 mouse_genomes_project 8 78464000 78471618 - MGP_CBAJ_P0088979 Slc35e1 protein_coding protein_coding MGP_CBAJ_T0002287.1 MGP_CBAJ_G0002201.1 mouse_genomes_project 8 1613852 1614066 - TEC TEC MGP_CBAJ_T0089545.1 MGP_CBAJ_G0033623.1 mouse_genomes_project 8 102758251 102797710 + MGP_CBAJ_P0089545 Cpne2 protein_coding protein_coding MGP_CBAJ_T0089546.1 MGP_CBAJ_G0033623.1 mouse_genomes_project 8 102758300 102776004 + Cpne2 protein_coding retained_intron MGP_CBAJ_T0089547.1 MGP_CBAJ_G0033623.1 mouse_genomes_project 8 102758328 102776999 + Cpne2 protein_coding processed_transcript MGP_CBAJ_T0089548.1 MGP_CBAJ_G0033623.1 mouse_genomes_project 8 102758328 102797571 + MGP_CBAJ_P0089548 Cpne2 protein_coding protein_coding MGP_CBAJ_T0089549.1 MGP_CBAJ_G0033623.1 mouse_genomes_project 8 102789827 102797295 + Cpne2 protein_coding retained_intron MGP_CBAJ_T0015714.1 MGP_CBAJ_G0013826.1 mouse_genomes_project 8 2259359 2260316 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0088433.1 MGP_CBAJ_G0033290.1 mouse_genomes_project 8 61530683 61535994 - MGP_CBAJ_P0088433 Sap30 protein_coding protein_coding MGP_CBAJ_T0090355.1 MGP_CBAJ_G0033897.1 mouse_genomes_project 8 135680308 135697364 + MGP_CBAJ_P0090355 Spg7 protein_coding protein_coding MGP_CBAJ_T0090356.1 MGP_CBAJ_G0033897.1 mouse_genomes_project 8 135682545 135715240 + MGP_CBAJ_P0090356 Spg7 protein_coding protein_coding MGP_CBAJ_T0090357.1 MGP_CBAJ_G0033897.1 mouse_genomes_project 8 135682842 135715233 + MGP_CBAJ_P0090357 Spg7 protein_coding protein_coding MGP_CBAJ_T0090358.1 MGP_CBAJ_G0033897.1 mouse_genomes_project 8 135682874 135715231 + Spg7 protein_coding retained_intron MGP_CBAJ_T0090359.1 MGP_CBAJ_G0033897.1 mouse_genomes_project 8 135682893 135715243 + MGP_CBAJ_P0090359 Spg7 protein_coding protein_coding MGP_CBAJ_T0090360.1 MGP_CBAJ_G0033897.1 mouse_genomes_project 8 135691172 135706339 + MGP_CBAJ_P0090360 Spg7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090361.1 MGP_CBAJ_G0033897.1 mouse_genomes_project 8 135697785 135706365 + Spg7 protein_coding retained_intron MGP_CBAJ_T0090362.1 MGP_CBAJ_G0033897.1 mouse_genomes_project 8 135698157 135715233 + MGP_CBAJ_P0090362 Spg7 protein_coding protein_coding MGP_CBAJ_T0090363.1 MGP_CBAJ_G0033897.1 mouse_genomes_project 8 135704614 135710754 + Spg7 protein_coding retained_intron MGP_CBAJ_T0090364.1 MGP_CBAJ_G0033897.1 mouse_genomes_project 8 135704784 135709093 + Spg7 protein_coding processed_transcript MGP_CBAJ_T0090365.1 MGP_CBAJ_G0033897.1 mouse_genomes_project 8 135709052 135715233 + MGP_CBAJ_P0090365 Spg7 protein_coding protein_coding MGP_CBAJ_T0015756.1 MGP_CBAJ_G0013868.1 mouse_genomes_project 8 82562169 82563177 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009035.1 MGP_CBAJ_G0007259.1 mouse_genomes_project 8 94960629 95016599 + Gm2694 lincRNA lincRNA MGP_CBAJ_T0009036.1 MGP_CBAJ_G0007259.1 mouse_genomes_project 8 94960629 95016598 + Gm2694 lincRNA lincRNA MGP_CBAJ_T0009037.1 MGP_CBAJ_G0007259.1 mouse_genomes_project 8 94960629 95012120 + Gm2694 lincRNA lincRNA MGP_CBAJ_T0009038.1 MGP_CBAJ_G0007259.1 mouse_genomes_project 8 94960661 95016597 + Gm2694 lincRNA lincRNA MGP_CBAJ_T0009039.1 MGP_CBAJ_G0007259.1 mouse_genomes_project 8 94960933 95016053 + Gm2694 lincRNA lincRNA MGP_CBAJ_T0009040.1 MGP_CBAJ_G0007259.1 mouse_genomes_project 8 94960951 95016599 + Gm2694 lincRNA lincRNA MGP_CBAJ_T0009041.1 MGP_CBAJ_G0007259.1 mouse_genomes_project 8 94960974 94992387 + Gm2694 lincRNA lincRNA MGP_CBAJ_T0089871.1 MGP_CBAJ_G0033750.1 mouse_genomes_project 8 117114291 117130389 + MGP_CBAJ_P0089871 Vps4a protein_coding protein_coding MGP_CBAJ_T0089872.1 MGP_CBAJ_G0033750.1 mouse_genomes_project 8 117122107 117127315 + Vps4a protein_coding retained_intron MGP_CBAJ_T0089873.1 MGP_CBAJ_G0033750.1 mouse_genomes_project 8 117126882 117127734 + Vps4a protein_coding retained_intron MGP_CBAJ_T0011592.1 MGP_CBAJ_G0009730.1 mouse_genomes_project 8 69885933 69886024 + Gm26210 misc_RNA misc_RNA MGP_CBAJ_T0100788.1 MGP_CBAJ_G0039043.1 mouse_genomes_project 8 17687776 17687879 + Gm22551 snoRNA snoRNA MGP_CBAJ_T0008985.1 MGP_CBAJ_G0007216.1 mouse_genomes_project 8 33803426 33875427 - Gm3985 lincRNA lincRNA MGP_CBAJ_T0008986.1 MGP_CBAJ_G0007216.1 mouse_genomes_project 8 33805401 33864103 - Gm3985 lincRNA lincRNA MGP_CBAJ_T0089161.1 MGP_CBAJ_G0033515.1 mouse_genomes_project 8 91311438 91341715 + MGP_CBAJ_P0089161 Rfx1 protein_coding protein_coding MGP_CBAJ_T0100780.1 MGP_CBAJ_G0039035.1 mouse_genomes_project 8 5129520 5129649 + Gm25169 snoRNA snoRNA MGP_CBAJ_T0089238.1 MGP_CBAJ_G0033533.1 mouse_genomes_project 8 92078167 92082347 + MGP_CBAJ_P0089238 Gadd45gip1 protein_coding protein_coding MGP_CBAJ_T0010887.1 MGP_CBAJ_G0009025.1 mouse_genomes_project 8 121188924 121189021 - Gm44489 miRNA miRNA MGP_CBAJ_T0005313.1 MGP_CBAJ_G0004497.1 mouse_genomes_project 8 126006134 126015685 - Gm16118 antisense antisense MGP_CBAJ_T0087513.1 MGP_CBAJ_G0032980.1 mouse_genomes_project 8 623318 625993 + MGP_CBAJ_P0087513 Pet100 protein_coding protein_coding MGP_CBAJ_T0089471.1 MGP_CBAJ_G0033597.1 mouse_genomes_project 8 100852691 100884038 + MGP_CBAJ_P0089471 Mmp2 protein_coding protein_coding MGP_CBAJ_T0015747.1 MGP_CBAJ_G0013859.1 mouse_genomes_project 8 65625452 65625825 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0088846.1 MGP_CBAJ_G0033407.1 mouse_genomes_project 8 77120577 77123685 + MGP_CBAJ_P0088846 Ocel1 protein_coding protein_coding MGP_CBAJ_T0088847.1 MGP_CBAJ_G0033407.1 mouse_genomes_project 8 77120618 77122986 + MGP_CBAJ_P0088847 Ocel1 protein_coding protein_coding MGP_CBAJ_T0088848.1 MGP_CBAJ_G0033407.1 mouse_genomes_project 8 77120625 77128664 + MGP_CBAJ_P0088848 Ocel1 protein_coding protein_coding MGP_CBAJ_T0088849.1 MGP_CBAJ_G0033407.1 mouse_genomes_project 8 77121769 77122252 + Ocel1 protein_coding retained_intron MGP_CBAJ_T0015779.1 MGP_CBAJ_G0013891.1 mouse_genomes_project 8 106184501 106185479 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0087596.1 MGP_CBAJ_G0033001.1 mouse_genomes_project 8 1350075 1390368 - MGP_CBAJ_P0087596 Elavl1 protein_coding protein_coding MGP_CBAJ_T0087761.1 MGP_CBAJ_G0033053.1 mouse_genomes_project 8 11992951 12018578 + MGP_CBAJ_P0087761 Cdc16 protein_coding protein_coding MGP_CBAJ_T0087762.1 MGP_CBAJ_G0033053.1 mouse_genomes_project 8 11992952 11998283 + Cdc16 protein_coding processed_transcript MGP_CBAJ_T0087763.1 MGP_CBAJ_G0033053.1 mouse_genomes_project 8 11992990 12001726 + Cdc16 protein_coding processed_transcript MGP_CBAJ_T0087764.1 MGP_CBAJ_G0033053.1 mouse_genomes_project 8 11994042 11998286 + Cdc16 protein_coding retained_intron MGP_CBAJ_T0087765.1 MGP_CBAJ_G0033053.1 mouse_genomes_project 8 12015612 12018578 + Cdc16 protein_coding retained_intron MGP_CBAJ_T0002295.1 MGP_CBAJ_G0002209.1 mouse_genomes_project 8 92727882 92728522 + TEC TEC MGP_CBAJ_T0002296.1 MGP_CBAJ_G0002209.1 mouse_genomes_project 8 92727882 92728514 + TEC TEC MGP_CBAJ_T0090444.1 MGP_CBAJ_G0033917.1 mouse_genomes_project 8 136349483 136351540 + Rhou protein_coding retained_intron MGP_CBAJ_T0090445.1 MGP_CBAJ_G0033917.1 mouse_genomes_project 8 136349483 136359445 + MGP_CBAJ_P0090445 Rhou protein_coding protein_coding MGP_CBAJ_T0088142.1 MGP_CBAJ_G0033197.1 mouse_genomes_project 8 35154866 35164945 + MGP_CBAJ_P0088142 Mboat4 protein_coding protein_coding MGP_CBAJ_T0088502.1 MGP_CBAJ_G0033305.1 mouse_genomes_project 8 67637657 68117900 + MGP_CBAJ_P0088502 Spock3 protein_coding protein_coding MGP_CBAJ_T0088503.1 MGP_CBAJ_G0033305.1 mouse_genomes_project 8 67637880 68117908 + MGP_CBAJ_P0088503 Spock3 protein_coding protein_coding MGP_CBAJ_T0088504.1 MGP_CBAJ_G0033305.1 mouse_genomes_project 8 67638009 67885840 + Spock3 protein_coding retained_intron MGP_CBAJ_T0088505.1 MGP_CBAJ_G0033305.1 mouse_genomes_project 8 67638009 68118151 + MGP_CBAJ_P0088505 Spock3 protein_coding protein_coding MGP_CBAJ_T0088506.1 MGP_CBAJ_G0033305.1 mouse_genomes_project 8 67638448 68118142 + MGP_CBAJ_P0088506 Spock3 protein_coding protein_coding MGP_CBAJ_T0088507.1 MGP_CBAJ_G0033305.1 mouse_genomes_project 8 67638573 67656345 + Spock3 protein_coding processed_transcript MGP_CBAJ_T0088780.1 MGP_CBAJ_G0033379.1 mouse_genomes_project 8 76127764 76184900 + MGP_CBAJ_P0088780 Ell protein_coding protein_coding MGP_CBAJ_T0009012.1 MGP_CBAJ_G0007239.1 mouse_genomes_project 8 78472334 78484805 + Gm17435 lincRNA lincRNA MGP_CBAJ_T0089936.1 MGP_CBAJ_G0033770.1 mouse_genomes_project 8 120186534 120208827 + MGP_CBAJ_P0089936 Zfp821 protein_coding unknown_likely_coding MGP_CBAJ_T0088374.1 MGP_CBAJ_G0033270.1 mouse_genomes_project 8 50738403 50743147 + MGP_CBAJ_P0088374 protein_coding protein_coding MGP_CBAJ_T0100840.1 MGP_CBAJ_G0039095.1 mouse_genomes_project 8 134121295 134121374 - Gm23299 snoRNA snoRNA MGP_CBAJ_T0018187.1 MGP_CBAJ_G0015447.1 mouse_genomes_project 8 5375191 5377257 + Gm28262 processed_transcript lincRNA MGP_CBAJ_T0018188.1 MGP_CBAJ_G0015447.1 mouse_genomes_project 8 5377220 5382751 + Gm28262 processed_transcript TEC MGP_CBAJ_T0089693.1 MGP_CBAJ_G0033677.1 mouse_genomes_project 8 114388842 114390969 - MGP_CBAJ_P0089693 Fam96b protein_coding protein_coding MGP_CBAJ_T0089694.1 MGP_CBAJ_G0033677.1 mouse_genomes_project 8 114388844 114390703 - Fam96b protein_coding retained_intron MGP_CBAJ_T0089695.1 MGP_CBAJ_G0033677.1 mouse_genomes_project 8 114388851 114390705 - MGP_CBAJ_P0089695 Fam96b protein_coding protein_coding MGP_CBAJ_T0015748.1 MGP_CBAJ_G0013860.1 mouse_genomes_project 8 68597907 68598909 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098103.1 MGP_CBAJ_G0036376.1 mouse_genomes_project 8 50602977 50603101 + n-R5s96 rRNA rRNA MGP_CBAJ_T0010879.1 MGP_CBAJ_G0009017.1 mouse_genomes_project 8 115126374 115126483 - Gm27320 miRNA miRNA MGP_CBAJ_T0089005.1 MGP_CBAJ_G0033458.1 mouse_genomes_project 8 81164042 81209157 + MGP_CBAJ_P0089005 Tom1 protein_coding protein_coding MGP_CBAJ_T0089006.1 MGP_CBAJ_G0033458.1 mouse_genomes_project 8 81164042 81209157 + MGP_CBAJ_P0089006 Tom1 protein_coding protein_coding MGP_CBAJ_T0089363.1 MGP_CBAJ_G0033568.1 mouse_genomes_project 8 93215327 93258448 + Phkb protein_coding processed_transcript MGP_CBAJ_T0089364.1 MGP_CBAJ_G0033568.1 mouse_genomes_project 8 93215359 93314367 + MGP_CBAJ_P0089364 Phkb protein_coding nonsense_mediated_decay MGP_CBAJ_T0089365.1 MGP_CBAJ_G0033568.1 mouse_genomes_project 8 93215370 93445290 + MGP_CBAJ_P0089365 Phkb protein_coding protein_coding MGP_CBAJ_T0089366.1 MGP_CBAJ_G0033568.1 mouse_genomes_project 8 93215376 93296900 + Phkb protein_coding processed_transcript MGP_CBAJ_T0089367.1 MGP_CBAJ_G0033568.1 mouse_genomes_project 8 93215384 93296634 + MGP_CBAJ_P0089367 Phkb protein_coding protein_coding MGP_CBAJ_T0089368.1 MGP_CBAJ_G0033568.1 mouse_genomes_project 8 93217154 93278167 + MGP_CBAJ_P0089368 Phkb protein_coding protein_coding MGP_CBAJ_T0089369.1 MGP_CBAJ_G0033568.1 mouse_genomes_project 8 93217418 93258535 + MGP_CBAJ_P0089369 Phkb protein_coding nonsense_mediated_decay MGP_CBAJ_T0089370.1 MGP_CBAJ_G0033568.1 mouse_genomes_project 8 93397739 93413559 + MGP_CBAJ_P0089370 Phkb protein_coding protein_coding MGP_CBAJ_T0089371.1 MGP_CBAJ_G0033568.1 mouse_genomes_project 8 93418812 93444555 + Phkb protein_coding processed_transcript MGP_CBAJ_T0011603.1 MGP_CBAJ_G0009741.1 mouse_genomes_project 8 132990698 132990953 - Gm24239 misc_RNA misc_RNA MGP_CBAJ_T0090116.1 MGP_CBAJ_G0033832.1 mouse_genomes_project 8 129268618 129442820 + MGP_CBAJ_P0090116 Plcg2 protein_coding protein_coding MGP_CBAJ_T0089584.1 MGP_CBAJ_G0033635.1 mouse_genomes_project 8 103155380 103170940 - MGP_CBAJ_P0089584 Ccdc102a protein_coding protein_coding MGP_CBAJ_T0089585.1 MGP_CBAJ_G0033635.1 mouse_genomes_project 8 103166407 103170364 - MGP_CBAJ_P0089585 Ccdc102a protein_coding protein_coding MGP_CBAJ_T0088992.1 MGP_CBAJ_G0033453.1 mouse_genomes_project 8 78700631 78720281 + MGP_CBAJ_P0088992 Sin3b protein_coding protein_coding MGP_CBAJ_T0088993.1 MGP_CBAJ_G0033453.1 mouse_genomes_project 8 78700631 78741492 + MGP_CBAJ_P0088993 Sin3b protein_coding protein_coding MGP_CBAJ_T0089729.1 MGP_CBAJ_G0033691.1 mouse_genomes_project 8 115076536 115081213 + MGP_CBAJ_P0089729 Fbxl8 protein_coding protein_coding MGP_CBAJ_T0089730.1 MGP_CBAJ_G0033691.1 mouse_genomes_project 8 115076570 115081057 + MGP_CBAJ_P0089730 Fbxl8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087745.1 MGP_CBAJ_G0033047.1 mouse_genomes_project 8 11603687 11622120 + MGP_CBAJ_P0087745 Grk1 protein_coding protein_coding MGP_CBAJ_T0097848.1 MGP_CBAJ_G0036121.1 mouse_genomes_project 8 114568284 114575623 + pseudogene pseudogene MGP_CBAJ_T0011588.1 MGP_CBAJ_G0009726.1 mouse_genomes_project 8 26309020 26309279 - Gm22227 misc_RNA misc_RNA MGP_CBAJ_T0011590.1 MGP_CBAJ_G0009728.1 mouse_genomes_project 8 32457110 32457211 - Gm24184 misc_RNA misc_RNA MGP_CBAJ_T0010834.1 MGP_CBAJ_G0008972.1 mouse_genomes_project 8 22786436 22786526 - Mir3107 miRNA miRNA MGP_CBAJ_T0011596.1 MGP_CBAJ_G0009734.1 mouse_genomes_project 8 95143535 95143890 + Gm24841 misc_RNA misc_RNA MGP_CBAJ_T0099573.1 MGP_CBAJ_G0037828.1 mouse_genomes_project 8 121027633 121027740 - Gm23627 snRNA snRNA MGP_CBAJ_T0088963.1 MGP_CBAJ_G0033440.1 mouse_genomes_project 8 78128303 78136918 - MGP_CBAJ_P0088963 Cib3 protein_coding protein_coding MGP_CBAJ_T0088078.1 MGP_CBAJ_G0033172.1 mouse_genomes_project 8 27605353 27609924 + MGP_CBAJ_P0088078 Tex24 protein_coding protein_coding MGP_CBAJ_T0088727.1 MGP_CBAJ_G0033368.1 mouse_genomes_project 8 75874039 75893395 + MGP_CBAJ_P0088727 protein_coding protein_coding MGP_CBAJ_T0088728.1 MGP_CBAJ_G0033368.1 mouse_genomes_project 8 75874039 75893400 + MGP_CBAJ_P0088728 protein_coding protein_coding MGP_CBAJ_T0088729.1 MGP_CBAJ_G0033368.1 mouse_genomes_project 8 75876615 75880957 + protein_coding retained_intron MGP_CBAJ_T0088153.1 MGP_CBAJ_G0033207.1 mouse_genomes_project 8 37145122 37146975 - MGP_CBAJ_P0088153 Cldn23 protein_coding protein_coding MGP_CBAJ_T0100809.1 MGP_CBAJ_G0039064.1 mouse_genomes_project 8 67829140 67829274 - Gm24236 snoRNA snoRNA MGP_CBAJ_T0098462.1 MGP_CBAJ_G0036723.1 mouse_genomes_project 8 34916070 34917048 - Gm26978 sense_intronic sense_intronic MGP_CBAJ_T0087749.1 MGP_CBAJ_G0033050.1 mouse_genomes_project 8 11760610 11772335 - MGP_CBAJ_P0087749 1700029H14Rik protein_coding protein_coding MGP_CBAJ_T0087750.1 MGP_CBAJ_G0033050.1 mouse_genomes_project 8 11760610 11772322 - MGP_CBAJ_P0087750 1700029H14Rik protein_coding protein_coding MGP_CBAJ_T0087751.1 MGP_CBAJ_G0033050.1 mouse_genomes_project 8 11760888 11772279 - MGP_CBAJ_P0087751 1700029H14Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0087752.1 MGP_CBAJ_G0033050.1 mouse_genomes_project 8 11760909 11772278 - MGP_CBAJ_P0087752 1700029H14Rik protein_coding protein_coding MGP_CBAJ_T0087753.1 MGP_CBAJ_G0033050.1 mouse_genomes_project 8 11765832 11772279 - MGP_CBAJ_P0087753 1700029H14Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0009025.1 MGP_CBAJ_G0007250.1 mouse_genomes_project 8 94349284 94366533 + Gm27167 lincRNA lincRNA MGP_CBAJ_T0088438.1 MGP_CBAJ_G0033292.1 mouse_genomes_project 8 61853566 62120764 - MGP_CBAJ_P0088438 Galntl6 protein_coding protein_coding MGP_CBAJ_T0088439.1 MGP_CBAJ_G0033292.1 mouse_genomes_project 8 61853574 63204533 - MGP_CBAJ_P0088439 Galntl6 protein_coding protein_coding MGP_CBAJ_T0088440.1 MGP_CBAJ_G0033292.1 mouse_genomes_project 8 61855734 62120839 - MGP_CBAJ_P0088440 Galntl6 protein_coding protein_coding MGP_CBAJ_T0088441.1 MGP_CBAJ_G0033292.1 mouse_genomes_project 8 61877475 61939199 - Galntl6 protein_coding processed_transcript MGP_CBAJ_T0088442.1 MGP_CBAJ_G0033292.1 mouse_genomes_project 8 62641100 63203520 - Galntl6 protein_coding retained_intron MGP_CBAJ_T0088443.1 MGP_CBAJ_G0033292.1 mouse_genomes_project 8 62641186 63203469 - MGP_CBAJ_P0088443 Galntl6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088444.1 MGP_CBAJ_G0033292.1 mouse_genomes_project 8 62641306 62942315 - MGP_CBAJ_P0088444 Galntl6 protein_coding protein_coding MGP_CBAJ_T0088445.1 MGP_CBAJ_G0033292.1 mouse_genomes_project 8 62716985 62942334 - Galntl6 protein_coding processed_transcript MGP_CBAJ_T0088446.1 MGP_CBAJ_G0033292.1 mouse_genomes_project 8 62758744 63203753 - MGP_CBAJ_P0088446 Galntl6 protein_coding protein_coding MGP_CBAJ_T0010857.1 MGP_CBAJ_G0008995.1 mouse_genomes_project 8 91330828 91330916 + Mir709 miRNA miRNA MGP_CBAJ_T0089995.1 MGP_CBAJ_G0033792.1 mouse_genomes_project 8 121758908 121762715 + MGP_CBAJ_P0089995 Aars protein_coding protein_coding MGP_CBAJ_T0089996.1 MGP_CBAJ_G0033792.1 mouse_genomes_project 8 121759643 121773248 + Aars protein_coding retained_intron MGP_CBAJ_T0089997.1 MGP_CBAJ_G0033792.1 mouse_genomes_project 8 121759666 121785767 + MGP_CBAJ_P0089997 Aars protein_coding protein_coding MGP_CBAJ_T0089998.1 MGP_CBAJ_G0033792.1 mouse_genomes_project 8 121759680 121774867 + Aars protein_coding retained_intron MGP_CBAJ_T0089999.1 MGP_CBAJ_G0033792.1 mouse_genomes_project 8 121767490 121768574 + Aars protein_coding retained_intron MGP_CBAJ_T0090000.1 MGP_CBAJ_G0033792.1 mouse_genomes_project 8 121768843 121773246 + Aars protein_coding retained_intron MGP_CBAJ_T0090001.1 MGP_CBAJ_G0033792.1 mouse_genomes_project 8 121776035 121778135 + Aars protein_coding retained_intron MGP_CBAJ_T0010888.1 MGP_CBAJ_G0009026.1 mouse_genomes_project 8 121731357 121731438 - Mir3473d miRNA miRNA MGP_CBAJ_T0089469.1 MGP_CBAJ_G0033596.1 mouse_genomes_project 8 100672371 100678938 + MGP_CBAJ_P0089469 Irx6 protein_coding protein_coding MGP_CBAJ_T0089470.1 MGP_CBAJ_G0033596.1 mouse_genomes_project 8 100672814 100678938 + MGP_CBAJ_P0089470 Irx6 protein_coding protein_coding MGP_CBAJ_T0087572.1 MGP_CBAJ_G0032996.1 mouse_genomes_project 8 1302652 1311809 + MGP_CBAJ_P0087572 Map2k7 protein_coding protein_coding MGP_CBAJ_T0087573.1 MGP_CBAJ_G0032996.1 mouse_genomes_project 8 1302673 1311810 + MGP_CBAJ_P0087573 Map2k7 protein_coding protein_coding MGP_CBAJ_T0087574.1 MGP_CBAJ_G0032996.1 mouse_genomes_project 8 1302741 1311810 + MGP_CBAJ_P0087574 Map2k7 protein_coding protein_coding MGP_CBAJ_T0087575.1 MGP_CBAJ_G0032996.1 mouse_genomes_project 8 1302741 1311810 + MGP_CBAJ_P0087575 Map2k7 protein_coding protein_coding MGP_CBAJ_T0087576.1 MGP_CBAJ_G0032996.1 mouse_genomes_project 8 1302777 1315336 + MGP_CBAJ_P0087576 Map2k7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087577.1 MGP_CBAJ_G0032996.1 mouse_genomes_project 8 1304017 1311810 + MGP_CBAJ_P0087577 Map2k7 protein_coding protein_coding MGP_CBAJ_T0087578.1 MGP_CBAJ_G0032996.1 mouse_genomes_project 8 1304017 1311809 + MGP_CBAJ_P0087578 Map2k7 protein_coding protein_coding MGP_CBAJ_T0087579.1 MGP_CBAJ_G0032996.1 mouse_genomes_project 8 1307176 1309754 + MGP_CBAJ_P0087579 Map2k7 protein_coding protein_coding MGP_CBAJ_T0087580.1 MGP_CBAJ_G0032996.1 mouse_genomes_project 8 1308369 1310090 + Map2k7 protein_coding processed_transcript MGP_CBAJ_T0087581.1 MGP_CBAJ_G0032996.1 mouse_genomes_project 8 1308549 1310213 + Map2k7 protein_coding retained_intron MGP_CBAJ_T0089708.1 MGP_CBAJ_G0033686.1 mouse_genomes_project 8 114905834 114939898 + MGP_CBAJ_P0089708 Ces4a protein_coding protein_coding MGP_CBAJ_T0087877.1 MGP_CBAJ_G0033109.1 mouse_genomes_project 8 21591459 21638333 - MGP_CBAJ_P0087877 Nek5 protein_coding protein_coding MGP_CBAJ_T0087878.1 MGP_CBAJ_G0033109.1 mouse_genomes_project 8 21591474 21636962 - MGP_CBAJ_P0087878 Nek5 protein_coding unknown_likely_coding MGP_CBAJ_T0089672.1 MGP_CBAJ_G0033670.1 mouse_genomes_project 8 114124503 114151929 - MGP_CBAJ_P0089672 Dync1li2 protein_coding protein_coding MGP_CBAJ_T0090336.1 MGP_CBAJ_G0033888.1 mouse_genomes_project 8 135115411 135120525 + MGP_CBAJ_P0090336 Cdt1 protein_coding protein_coding MGP_CBAJ_T0009047.1 MGP_CBAJ_G0007264.1 mouse_genomes_project 8 99718229 99725455 + Irx3os lincRNA lincRNA MGP_CBAJ_T0009048.1 MGP_CBAJ_G0007264.1 mouse_genomes_project 8 99719989 99723131 + Irx3os lincRNA lincRNA MGP_CBAJ_T0089951.1 MGP_CBAJ_G0033777.1 mouse_genomes_project 8 120608754 120620737 + MGP_CBAJ_P0089951 Zfp612 protein_coding protein_coding MGP_CBAJ_T0015760.1 MGP_CBAJ_G0013872.1 mouse_genomes_project 8 86412507 86413450 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0088158.1 MGP_CBAJ_G0033210.1 mouse_genomes_project 8 37859520 37923124 + MGP_CBAJ_P0088158 6430573F11Rik protein_coding protein_coding MGP_CBAJ_T0088159.1 MGP_CBAJ_G0033210.1 mouse_genomes_project 8 37859546 37924485 + MGP_CBAJ_P0088159 6430573F11Rik protein_coding protein_coding MGP_CBAJ_T0088160.1 MGP_CBAJ_G0033210.1 mouse_genomes_project 8 37860154 37921759 + MGP_CBAJ_P0088160 6430573F11Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0088161.1 MGP_CBAJ_G0033210.1 mouse_genomes_project 8 37897412 37923177 + MGP_CBAJ_P0088161 6430573F11Rik protein_coding protein_coding MGP_CBAJ_T0088162.1 MGP_CBAJ_G0033210.1 mouse_genomes_project 8 37915821 37922761 + 6430573F11Rik protein_coding processed_transcript MGP_CBAJ_T0089267.1 MGP_CBAJ_G0033540.1 mouse_genomes_project 8 92148980 92152350 + MGP_CBAJ_P0089267 Klf1 protein_coding protein_coding MGP_CBAJ_T0018226.1 MGP_CBAJ_G0015463.1 mouse_genomes_project 8 94860141 94866012 - Gm27208 processed_transcript lincRNA MGP_CBAJ_T0018227.1 MGP_CBAJ_G0015463.1 mouse_genomes_project 8 94865529 94866634 - Gm27208 processed_transcript TEC MGP_CBAJ_T0015736.1 MGP_CBAJ_G0013848.1 mouse_genomes_project 8 35412630 35414726 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0089818.1 MGP_CBAJ_G0033730.1 mouse_genomes_project 8 115881107 115887007 - MGP_CBAJ_P0089818 Dpep3 protein_coding protein_coding MGP_CBAJ_T0008993.1 MGP_CBAJ_G0007221.1 mouse_genomes_project 8 35454806 35476003 + lincRNA lincRNA MGP_CBAJ_T0015733.1 MGP_CBAJ_G0013845.1 mouse_genomes_project 8 28528180 28531124 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015782.1 MGP_CBAJ_G0013894.1 mouse_genomes_project 8 114610604 114611629 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0088420.1 MGP_CBAJ_G0033285.1 mouse_genomes_project 8 60175782 60203248 + MGP_CBAJ_P0088420 Hpgd protein_coding protein_coding MGP_CBAJ_T0087895.1 MGP_CBAJ_G0033118.1 mouse_genomes_project 8 22106318 22132750 + MGP_CBAJ_P0087895 Slc20a2 protein_coding unknown_likely_coding MGP_CBAJ_T0090376.1 MGP_CBAJ_G0033900.1 mouse_genomes_project 8 135775566 135790994 - MGP_CBAJ_P0090376 Sult5a1 protein_coding protein_coding MGP_CBAJ_T0090377.1 MGP_CBAJ_G0033900.1 mouse_genomes_project 8 135775568 135790994 - MGP_CBAJ_P0090377 Sult5a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090378.1 MGP_CBAJ_G0033900.1 mouse_genomes_project 8 135778136 135790981 - MGP_CBAJ_P0090378 Sult5a1 protein_coding protein_coding MGP_CBAJ_T0090379.1 MGP_CBAJ_G0033900.1 mouse_genomes_project 8 135780810 135790952 - MGP_CBAJ_P0090379 Sult5a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090380.1 MGP_CBAJ_G0033900.1 mouse_genomes_project 8 135789724 135790998 - Sult5a1 protein_coding retained_intron MGP_CBAJ_T0090381.1 MGP_CBAJ_G0033900.1 mouse_genomes_project 8 135789994 135791039 - Sult5a1 protein_coding retained_intron MGP_CBAJ_T0088450.1 MGP_CBAJ_G0033295.1 mouse_genomes_project 8 64985484 65024581 + MGP_CBAJ_P0088450 Aadat protein_coding protein_coding MGP_CBAJ_T0005309.1 MGP_CBAJ_G0004493.1 mouse_genomes_project 8 123590834 123608264 - Gm26994 antisense antisense MGP_CBAJ_T0088432.1 MGP_CBAJ_G0033289.1 mouse_genomes_project 8 61501249 61525595 + MGP_CBAJ_P0088432 Scrg1 protein_coding protein_coding MGP_CBAJ_T0005260.1 MGP_CBAJ_G0004453.1 mouse_genomes_project 8 22272906 22282288 + Gm15346 antisense antisense MGP_CBAJ_T0090048.1 MGP_CBAJ_G0033804.1 mouse_genomes_project 8 122668156 122761647 - MGP_CBAJ_P0090048 Cfdp1 protein_coding protein_coding MGP_CBAJ_T0087646.1 MGP_CBAJ_G0033022.1 mouse_genomes_project 8 9453504 9508915 - MGP_CBAJ_P0087646 Cars2 protein_coding protein_coding MGP_CBAJ_T0087647.1 MGP_CBAJ_G0033022.1 mouse_genomes_project 8 9453506 9508821 - MGP_CBAJ_P0087647 Cars2 protein_coding unknown_likely_coding MGP_CBAJ_T0015761.1 MGP_CBAJ_G0013873.1 mouse_genomes_project 8 86876279 86883082 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099562.1 MGP_CBAJ_G0037817.1 mouse_genomes_project 8 89179005 89179068 - Gm25267 snRNA snRNA MGP_CBAJ_T0015728.1 MGP_CBAJ_G0013840.1 mouse_genomes_project 8 20232035 20232771 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0089386.1 MGP_CBAJ_G0033571.1 mouse_genomes_project 8 94154671 94180196 - MGP_CBAJ_P0089386 protein_coding protein_coding MGP_CBAJ_T0089742.1 MGP_CBAJ_G0033698.1 mouse_genomes_project 8 115131260 115141171 - MGP_CBAJ_P0089742 protein_coding protein_coding MGP_CBAJ_T0010892.1 MGP_CBAJ_G0009030.1 mouse_genomes_project 8 122574357 122574431 - Mir7076 miRNA miRNA MGP_CBAJ_T0088100.1 MGP_CBAJ_G0033186.1 mouse_genomes_project 8 34185676 34368707 - MGP_CBAJ_P0088100 Wrn protein_coding protein_coding MGP_CBAJ_T0088101.1 MGP_CBAJ_G0033186.1 mouse_genomes_project 8 34185676 34368707 - MGP_CBAJ_P0088101 Wrn protein_coding protein_coding MGP_CBAJ_T0089434.1 MGP_CBAJ_G0033586.1 mouse_genomes_project 8 96700896 96717870 - MGP_CBAJ_P0089434 Sall1 protein_coding protein_coding MGP_CBAJ_T0088394.1 MGP_CBAJ_G0033275.1 mouse_genomes_project 8 57125212 57138573 + MGP_CBAJ_P0088394 Aga protein_coding protein_coding MGP_CBAJ_T0090081.1 MGP_CBAJ_G0033818.1 mouse_genomes_project 8 125697247 125704940 + MGP_CBAJ_P0090081 Clec3a protein_coding protein_coding MGP_CBAJ_T0089763.1 MGP_CBAJ_G0033704.1 mouse_genomes_project 8 115257995 115288790 + Lrrc36 protein_coding processed_transcript MGP_CBAJ_T0089764.1 MGP_CBAJ_G0033704.1 mouse_genomes_project 8 115258046 115271275 + Lrrc36 protein_coding processed_transcript MGP_CBAJ_T0089765.1 MGP_CBAJ_G0033704.1 mouse_genomes_project 8 115258046 115310233 + MGP_CBAJ_P0089765 Lrrc36 protein_coding protein_coding MGP_CBAJ_T0089766.1 MGP_CBAJ_G0033704.1 mouse_genomes_project 8 115272011 115310231 + MGP_CBAJ_P0089766 Lrrc36 protein_coding protein_coding MGP_CBAJ_T0088527.1 MGP_CBAJ_G0033315.1 mouse_genomes_project 8 70035404 70037873 + MGP_CBAJ_P0088527 Gm10663 protein_coding protein_coding MGP_CBAJ_T0088546.1 MGP_CBAJ_G0033321.1 mouse_genomes_project 8 72032216 72067051 + MGP_CBAJ_P0088546 Naf1 protein_coding protein_coding MGP_CBAJ_T0015781.1 MGP_CBAJ_G0013893.1 mouse_genomes_project 8 109134683 109135188 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0088787.1 MGP_CBAJ_G0033385.1 mouse_genomes_project 8 76296091 76301955 + MGP_CBAJ_P0088787 Lsm4 protein_coding protein_coding MGP_CBAJ_T0088788.1 MGP_CBAJ_G0033385.1 mouse_genomes_project 8 76296275 76301251 + MGP_CBAJ_P0088788 Lsm4 protein_coding protein_coding MGP_CBAJ_T0088789.1 MGP_CBAJ_G0033385.1 mouse_genomes_project 8 76300867 76301319 + Lsm4 protein_coding retained_intron MGP_CBAJ_T0089954.1 MGP_CBAJ_G0033780.1 mouse_genomes_project 8 120687967 120723772 - MGP_CBAJ_P0089954 Calb2 protein_coding protein_coding MGP_CBAJ_T0088952.1 MGP_CBAJ_G0033435.1 mouse_genomes_project 8 77874579 77895616 - MGP_CBAJ_P0088952 Cyp4f18 protein_coding protein_coding MGP_CBAJ_T0088953.1 MGP_CBAJ_G0033435.1 mouse_genomes_project 8 77874580 77879017 - Cyp4f18 protein_coding processed_transcript MGP_CBAJ_T0088954.1 MGP_CBAJ_G0033435.1 mouse_genomes_project 8 77875652 77879332 - Cyp4f18 protein_coding processed_transcript MGP_CBAJ_T0005276.1 MGP_CBAJ_G0004466.1 mouse_genomes_project 8 61332679 61335962 - Gm28063 antisense antisense MGP_CBAJ_T0005277.1 MGP_CBAJ_G0004466.1 mouse_genomes_project 8 61332697 61335962 - Gm28063 antisense antisense MGP_CBAJ_T0089953.1 MGP_CBAJ_G0033779.1 mouse_genomes_project 8 120649693 120651684 + MGP_CBAJ_P0089953 Gm21964 protein_coding protein_coding MGP_CBAJ_T0088972.1 MGP_CBAJ_G0033445.1 mouse_genomes_project 8 78389899 78410181 - MGP_CBAJ_P0088972 Calr3 protein_coding protein_coding MGP_CBAJ_T0088973.1 MGP_CBAJ_G0033445.1 mouse_genomes_project 8 78389906 78401585 - MGP_CBAJ_P0088973 Calr3 protein_coding protein_coding MGP_CBAJ_T0088888.1 MGP_CBAJ_G0033418.1 mouse_genomes_project 8 77330667 77333798 - MGP_CBAJ_P0088888 Bst2 protein_coding protein_coding MGP_CBAJ_T0090472.1 MGP_CBAJ_G0033929.1 mouse_genomes_project 8 137396366 137412818 - MGP_CBAJ_P0090472 Agt protein_coding protein_coding MGP_CBAJ_T0089431.1 MGP_CBAJ_G0033585.1 mouse_genomes_project 8 96323898 96403686 + MGP_CBAJ_P0089431 Cyld protein_coding protein_coding MGP_CBAJ_T0089432.1 MGP_CBAJ_G0033585.1 mouse_genomes_project 8 96338333 96403686 + MGP_CBAJ_P0089432 Cyld protein_coding protein_coding MGP_CBAJ_T0089433.1 MGP_CBAJ_G0033585.1 mouse_genomes_project 8 96338333 96403686 + MGP_CBAJ_P0089433 Cyld protein_coding protein_coding MGP_CBAJ_T0089673.1 MGP_CBAJ_G0033671.1 mouse_genomes_project 8 114155600 114218923 - MGP_CBAJ_P0089673 Terb1 protein_coding protein_coding MGP_CBAJ_T0089674.1 MGP_CBAJ_G0033671.1 mouse_genomes_project 8 114155918 114218919 - MGP_CBAJ_P0089674 Terb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089675.1 MGP_CBAJ_G0033671.1 mouse_genomes_project 8 114155919 114218918 - MGP_CBAJ_P0089675 Terb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089676.1 MGP_CBAJ_G0033671.1 mouse_genomes_project 8 114156643 114218946 - MGP_CBAJ_P0089676 Terb1 protein_coding protein_coding MGP_CBAJ_T0089028.1 MGP_CBAJ_G0033466.1 mouse_genomes_project 8 84056243 84075207 - MGP_CBAJ_P0089028 Tmem184c protein_coding protein_coding MGP_CBAJ_T0089029.1 MGP_CBAJ_G0033466.1 mouse_genomes_project 8 84065593 84075252 - MGP_CBAJ_P0089029 Tmem184c protein_coding protein_coding MGP_CBAJ_T0089030.1 MGP_CBAJ_G0033466.1 mouse_genomes_project 8 84069090 84075222 - MGP_CBAJ_P0089030 Tmem184c protein_coding protein_coding MGP_CBAJ_T0018224.1 MGP_CBAJ_G0015462.1 mouse_genomes_project 8 92322242 92329363 - A230103J11Rik processed_transcript processed_transcript MGP_CBAJ_T0018225.1 MGP_CBAJ_G0015462.1 mouse_genomes_project 8 92322271 92329346 - A230103J11Rik processed_transcript processed_transcript MGP_CBAJ_T0088627.1 MGP_CBAJ_G0033346.1 mouse_genomes_project 8 75363805 75407444 + MGP_CBAJ_P0088627 Pbx4 protein_coding protein_coding MGP_CBAJ_T0088628.1 MGP_CBAJ_G0033346.1 mouse_genomes_project 8 75363938 75390658 + Pbx4 protein_coding retained_intron MGP_CBAJ_T0088629.1 MGP_CBAJ_G0033346.1 mouse_genomes_project 8 75363951 75407444 + MGP_CBAJ_P0088629 Pbx4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088630.1 MGP_CBAJ_G0033346.1 mouse_genomes_project 8 75363974 75405838 + MGP_CBAJ_P0088630 Pbx4 protein_coding protein_coding MGP_CBAJ_T0088631.1 MGP_CBAJ_G0033346.1 mouse_genomes_project 8 75363976 75407444 + MGP_CBAJ_P0088631 Pbx4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088632.1 MGP_CBAJ_G0033346.1 mouse_genomes_project 8 75364004 75407444 + MGP_CBAJ_P0088632 Pbx4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088633.1 MGP_CBAJ_G0033346.1 mouse_genomes_project 8 75379377 75396394 + Pbx4 protein_coding processed_transcript MGP_CBAJ_T0088634.1 MGP_CBAJ_G0033346.1 mouse_genomes_project 8 75397532 75405790 + Pbx4 protein_coding retained_intron MGP_CBAJ_T0088635.1 MGP_CBAJ_G0033346.1 mouse_genomes_project 8 75397731 75407444 + Pbx4 protein_coding retained_intron MGP_CBAJ_T0090052.1 MGP_CBAJ_G0033808.1 mouse_genomes_project 8 122882084 122894952 + MGP_CBAJ_P0090052 Gabarapl2 protein_coding protein_coding MGP_CBAJ_T0090053.1 MGP_CBAJ_G0033808.1 mouse_genomes_project 8 122882139 122883153 + Gabarapl2 protein_coding retained_intron MGP_CBAJ_T0090054.1 MGP_CBAJ_G0033808.1 mouse_genomes_project 8 122882449 122894082 + Gabarapl2 protein_coding retained_intron MGP_CBAJ_T0005273.1 MGP_CBAJ_G0004463.1 mouse_genomes_project 8 48849551 48853051 + Gm15634 antisense antisense MGP_CBAJ_T0089696.1 MGP_CBAJ_G0033678.1 mouse_genomes_project 8 114505435 114506608 + protein_coding retained_intron MGP_CBAJ_T0099543.1 MGP_CBAJ_G0037798.1 mouse_genomes_project 8 38857988 38858090 - Gm25126 snRNA snRNA MGP_CBAJ_T0088819.1 MGP_CBAJ_G0033402.1 mouse_genomes_project 8 76567321 76578231 + MGP_CBAJ_P0088819 Map1s protein_coding protein_coding MGP_CBAJ_T0009026.1 MGP_CBAJ_G0007251.1 mouse_genomes_project 8 94367539 94368210 - Gm27168 lincRNA lincRNA MGP_CBAJ_T0009094.1 MGP_CBAJ_G0007296.1 mouse_genomes_project 8 134108541 134109005 + Gm27030 lincRNA lincRNA MGP_CBAJ_T0008977.1 MGP_CBAJ_G0007209.1 mouse_genomes_project 8 24228806 24246445 + Gm26714 lincRNA lincRNA MGP_CBAJ_T0100839.1 MGP_CBAJ_G0039094.1 mouse_genomes_project 8 130686538 130686626 + Gm22999 snoRNA snoRNA MGP_CBAJ_T0015769.1 MGP_CBAJ_G0013881.1 mouse_genomes_project 8 92100860 92101244 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009092.1 MGP_CBAJ_G0007295.1 mouse_genomes_project 8 133967683 133971890 + 1700030M09Rik lincRNA lincRNA MGP_CBAJ_T0009093.1 MGP_CBAJ_G0007295.1 mouse_genomes_project 8 133967689 133971100 + 1700030M09Rik lincRNA lincRNA MGP_CBAJ_T0087547.1 MGP_CBAJ_G0032991.1 mouse_genomes_project 8 953420 962605 - MGP_CBAJ_P0087547 Cd209b protein_coding nonsense_mediated_decay MGP_CBAJ_T0087548.1 MGP_CBAJ_G0032991.1 mouse_genomes_project 8 953422 962594 - MGP_CBAJ_P0087548 Cd209b protein_coding protein_coding MGP_CBAJ_T0087549.1 MGP_CBAJ_G0032991.1 mouse_genomes_project 8 954371 962594 - MGP_CBAJ_P0087549 Cd209b protein_coding protein_coding MGP_CBAJ_T0087550.1 MGP_CBAJ_G0032991.1 mouse_genomes_project 8 954442 962574 - MGP_CBAJ_P0087550 Cd209b protein_coding protein_coding MGP_CBAJ_T0102224.1 MGP_CBAJ_G0040253.1 mouse_genomes_project 8 18001552 18004083 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0088178.1 MGP_CBAJ_G0033216.1 mouse_genomes_project 8 42247665 42255406 - MGP_CBAJ_P0088178 Fgf20 protein_coding protein_coding MGP_CBAJ_T0088179.1 MGP_CBAJ_G0033216.1 mouse_genomes_project 8 42248224 42288171 - MGP_CBAJ_P0088179 Fgf20 protein_coding protein_coding MGP_CBAJ_T0018215.1 MGP_CBAJ_G0015458.1 mouse_genomes_project 8 78062519 78079858 - Gm16091 processed_transcript processed_transcript MGP_CBAJ_T0089856.1 MGP_CBAJ_G0033744.1 mouse_genomes_project 8 116600308 116672143 + MGP_CBAJ_P0089856 Cdh1 protein_coding protein_coding MGP_CBAJ_T0089857.1 MGP_CBAJ_G0033744.1 mouse_genomes_project 8 116600336 116671259 + MGP_CBAJ_P0089857 Cdh1 protein_coding protein_coding MGP_CBAJ_T0089858.1 MGP_CBAJ_G0033744.1 mouse_genomes_project 8 116601100 116652961 + Cdh1 protein_coding processed_transcript MGP_CBAJ_T0089454.1 MGP_CBAJ_G0033592.1 mouse_genomes_project 8 99096434 99199725 - MGP_CBAJ_P0089454 Rpgrip1l protein_coding protein_coding MGP_CBAJ_T0089455.1 MGP_CBAJ_G0033592.1 mouse_genomes_project 8 99098348 99199686 - MGP_CBAJ_P0089455 Rpgrip1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0089456.1 MGP_CBAJ_G0033592.1 mouse_genomes_project 8 99099569 99199674 - MGP_CBAJ_P0089456 Rpgrip1l protein_coding unknown_likely_coding MGP_CBAJ_T0089457.1 MGP_CBAJ_G0033592.1 mouse_genomes_project 8 99154446 99163227 - Rpgrip1l protein_coding retained_intron MGP_CBAJ_T0089458.1 MGP_CBAJ_G0033592.1 mouse_genomes_project 8 99194431 99197506 - MGP_CBAJ_P0089458 Rpgrip1l protein_coding protein_coding MGP_CBAJ_T0015743.1 MGP_CBAJ_G0013855.1 mouse_genomes_project 8 44266602 44268252 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002292.1 MGP_CBAJ_G0002206.1 mouse_genomes_project 8 46724111 46724939 - TEC TEC MGP_CBAJ_T0089033.1 MGP_CBAJ_G0033468.1 mouse_genomes_project 8 84750649 84758328 + MGP_CBAJ_P0089033 Ttc29 protein_coding protein_coding MGP_CBAJ_T0089034.1 MGP_CBAJ_G0033468.1 mouse_genomes_project 8 84750654 84758186 + MGP_CBAJ_P0089034 Ttc29 protein_coding protein_coding MGP_CBAJ_T0089035.1 MGP_CBAJ_G0033468.1 mouse_genomes_project 8 84750667 84755371 + Ttc29 protein_coding processed_transcript MGP_CBAJ_T0089036.1 MGP_CBAJ_G0033468.1 mouse_genomes_project 8 84750694 84943916 + MGP_CBAJ_P0089036 Ttc29 protein_coding protein_coding MGP_CBAJ_T0089037.1 MGP_CBAJ_G0033468.1 mouse_genomes_project 8 84750702 84755315 + Ttc29 protein_coding processed_transcript MGP_CBAJ_T0089038.1 MGP_CBAJ_G0033468.1 mouse_genomes_project 8 84756146 84943273 + MGP_CBAJ_P0089038 Ttc29 protein_coding protein_coding MGP_CBAJ_T0089039.1 MGP_CBAJ_G0033468.1 mouse_genomes_project 8 84790978 84816276 + Ttc29 protein_coding retained_intron MGP_CBAJ_T0089040.1 MGP_CBAJ_G0033468.1 mouse_genomes_project 8 84937837 84943364 + Ttc29 protein_coding processed_transcript MGP_CBAJ_T0099537.1 MGP_CBAJ_G0037792.1 mouse_genomes_project 8 22419149 22419267 - Gm24735 snRNA snRNA MGP_CBAJ_T0090569.1 MGP_CBAJ_G0033959.1 mouse_genomes_project 8 142134190 142186901 - MGP_CBAJ_P0090569 Gm3952 protein_coding protein_coding MGP_CBAJ_T0100834.1 MGP_CBAJ_G0039089.1 mouse_genomes_project 8 121514790 121514866 - Gm22193 snoRNA snoRNA MGP_CBAJ_T0087664.1 MGP_CBAJ_G0033028.1 mouse_genomes_project 8 10334069 10335908 + MGP_CBAJ_P0087664 A230072I06Rik protein_coding protein_coding MGP_CBAJ_T0088984.1 MGP_CBAJ_G0033451.1 mouse_genomes_project 8 78559970 78578119 + MGP_CBAJ_P0088984 Tmem38a protein_coding protein_coding MGP_CBAJ_T0002305.1 MGP_CBAJ_G0002218.1 mouse_genomes_project 8 133488081 133488759 + TEC TEC MGP_CBAJ_T0088371.1 MGP_CBAJ_G0033267.1 mouse_genomes_project 8 50593087 50597661 - MGP_CBAJ_P0088371 Cdkn2aip protein_coding protein_coding MGP_CBAJ_T0088974.1 MGP_CBAJ_G0033446.1 mouse_genomes_project 8 78410190 78435989 + MGP_CBAJ_P0088974 1700030K09Rik protein_coding protein_coding MGP_CBAJ_T0088975.1 MGP_CBAJ_G0033446.1 mouse_genomes_project 8 78410242 78435629 + MGP_CBAJ_P0088975 1700030K09Rik protein_coding protein_coding MGP_CBAJ_T0088976.1 MGP_CBAJ_G0033446.1 mouse_genomes_project 8 78432432 78433412 + 1700030K09Rik protein_coding retained_intron MGP_CBAJ_T0100817.1 MGP_CBAJ_G0039072.1 mouse_genomes_project 8 79191960 79192100 - Gm22532 snoRNA snoRNA MGP_CBAJ_T0089671.1 MGP_CBAJ_G0033669.1 mouse_genomes_project 8 114040317 114097919 - MGP_CBAJ_P0089671 Cmtm4 protein_coding protein_coding MGP_CBAJ_T0009088.1 MGP_CBAJ_G0007291.1 mouse_genomes_project 8 133557679 133560801 - 5033426O07Rik lincRNA lincRNA MGP_CBAJ_T0005272.1 MGP_CBAJ_G0004462.1 mouse_genomes_project 8 48355436 48454952 - Sorbs2os antisense antisense MGP_CBAJ_T0087721.1 MGP_CBAJ_G0033039.1 mouse_genomes_project 8 11237120 11285687 + MGP_CBAJ_P0087721 Cul4a protein_coding protein_coding MGP_CBAJ_T0087722.1 MGP_CBAJ_G0033039.1 mouse_genomes_project 8 11237239 11255745 + MGP_CBAJ_P0087722 Cul4a protein_coding protein_coding MGP_CBAJ_T0087723.1 MGP_CBAJ_G0033039.1 mouse_genomes_project 8 11237435 11253269 + Cul4a protein_coding retained_intron MGP_CBAJ_T0087724.1 MGP_CBAJ_G0033039.1 mouse_genomes_project 8 11255047 11285109 + MGP_CBAJ_P0087724 Cul4a protein_coding nonsense_mediated_decay MGP_CBAJ_T0087725.1 MGP_CBAJ_G0033039.1 mouse_genomes_project 8 11277589 11280339 + Cul4a protein_coding retained_intron MGP_CBAJ_T0087726.1 MGP_CBAJ_G0033039.1 mouse_genomes_project 8 11278053 11284366 + Cul4a protein_coding processed_transcript MGP_CBAJ_T0087727.1 MGP_CBAJ_G0033039.1 mouse_genomes_project 8 11281971 11285687 + Cul4a protein_coding retained_intron MGP_CBAJ_T0090222.1 MGP_CBAJ_G0033864.1 mouse_genomes_project 8 133009713 133032226 + MGP_CBAJ_P0090222 Irf8 protein_coding protein_coding MGP_CBAJ_T0090223.1 MGP_CBAJ_G0033864.1 mouse_genomes_project 8 133009714 133016640 + Irf8 protein_coding retained_intron MGP_CBAJ_T0090224.1 MGP_CBAJ_G0033864.1 mouse_genomes_project 8 133009740 133029010 + MGP_CBAJ_P0090224 Irf8 protein_coding protein_coding MGP_CBAJ_T0090225.1 MGP_CBAJ_G0033864.1 mouse_genomes_project 8 133011994 133031113 + MGP_CBAJ_P0090225 Irf8 protein_coding protein_coding MGP_CBAJ_T0090227.1 MGP_CBAJ_G0033864.1 mouse_genomes_project 8 133021011 133029265 + Irf8 protein_coding retained_intron MGP_CBAJ_T0090228.1 MGP_CBAJ_G0033864.1 mouse_genomes_project 8 133027740 133029243 + Irf8 protein_coding processed_transcript MGP_CBAJ_T0089346.1 MGP_CBAJ_G0033560.1 mouse_genomes_project 8 92535265 92575012 - MGP_CBAJ_P0089346 Vps35 protein_coding protein_coding MGP_CBAJ_T0088786.1 MGP_CBAJ_G0033384.1 mouse_genomes_project 8 76251947 76268312 - MGP_CBAJ_P0088786 Pgpep1 protein_coding protein_coding MGP_CBAJ_T0089554.1 MGP_CBAJ_G0033626.1 mouse_genomes_project 8 102896558 102904212 + MGP_CBAJ_P0089554 Arl2bp protein_coding protein_coding MGP_CBAJ_T0089555.1 MGP_CBAJ_G0033626.1 mouse_genomes_project 8 102897029 102904212 + MGP_CBAJ_P0089555 Arl2bp protein_coding protein_coding MGP_CBAJ_T0088157.1 MGP_CBAJ_G0033209.1 mouse_genomes_project 8 37575610 37608537 - MGP_CBAJ_P0088157 Lonrf1 protein_coding protein_coding MGP_CBAJ_T0088752.1 MGP_CBAJ_G0033376.1 mouse_genomes_project 8 76086989 76093227 - MGP_CBAJ_P0088752 protein_coding protein_coding MGP_CBAJ_T0088753.1 MGP_CBAJ_G0033376.1 mouse_genomes_project 8 76086989 76093453 - MGP_CBAJ_P0088753 protein_coding protein_coding MGP_CBAJ_T0088754.1 MGP_CBAJ_G0033376.1 mouse_genomes_project 8 76086989 76093222 - MGP_CBAJ_P0088754 protein_coding protein_coding MGP_CBAJ_T0088755.1 MGP_CBAJ_G0033376.1 mouse_genomes_project 8 76086990 76093251 - protein_coding retained_intron MGP_CBAJ_T0088756.1 MGP_CBAJ_G0033376.1 mouse_genomes_project 8 76086992 76093289 - MGP_CBAJ_P0088756 protein_coding protein_coding MGP_CBAJ_T0088758.1 MGP_CBAJ_G0033376.1 mouse_genomes_project 8 76087054 76093673 - MGP_CBAJ_P0088758 protein_coding protein_coding MGP_CBAJ_T0088759.1 MGP_CBAJ_G0033376.1 mouse_genomes_project 8 76087058 76090707 - MGP_CBAJ_P0088759 protein_coding protein_coding MGP_CBAJ_T0088760.1 MGP_CBAJ_G0033376.1 mouse_genomes_project 8 76087156 76091029 - MGP_CBAJ_P0088760 protein_coding protein_coding MGP_CBAJ_T0099539.1 MGP_CBAJ_G0037794.1 mouse_genomes_project 8 27694197 27694304 - Gm24410 snRNA snRNA MGP_CBAJ_T0010820.1 MGP_CBAJ_G0008958.1 mouse_genomes_project 8 6297136 6297206 - Mir7654 miRNA miRNA MGP_CBAJ_T0089811.1 MGP_CBAJ_G0033727.1 mouse_genomes_project 8 115838082 115840747 - MGP_CBAJ_P0089811 Psmb10 protein_coding protein_coding MGP_CBAJ_T0088985.1 MGP_CBAJ_G0033452.1 mouse_genomes_project 8 78616986 78671093 + MGP_CBAJ_P0088985 Nwd1 protein_coding protein_coding MGP_CBAJ_T0088986.1 MGP_CBAJ_G0033452.1 mouse_genomes_project 8 78616997 78685368 + MGP_CBAJ_P0088986 Nwd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088987.1 MGP_CBAJ_G0033452.1 mouse_genomes_project 8 78617046 78692111 + MGP_CBAJ_P0088987 Nwd1 protein_coding protein_coding MGP_CBAJ_T0088988.1 MGP_CBAJ_G0033452.1 mouse_genomes_project 8 78617068 78689256 + MGP_CBAJ_P0088988 Nwd1 protein_coding protein_coding MGP_CBAJ_T0088989.1 MGP_CBAJ_G0033452.1 mouse_genomes_project 8 78623688 78685438 + MGP_CBAJ_P0088989 Nwd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088990.1 MGP_CBAJ_G0033452.1 mouse_genomes_project 8 78627294 78685399 + MGP_CBAJ_P0088990 Nwd1 protein_coding protein_coding MGP_CBAJ_T0088991.1 MGP_CBAJ_G0033452.1 mouse_genomes_project 8 78659189 78670490 + Nwd1 protein_coding processed_transcript MGP_CBAJ_T0088606.1 MGP_CBAJ_G0033338.1 mouse_genomes_project 8 75204268 75212183 + Zfp964 protein_coding retained_intron MGP_CBAJ_T0088607.1 MGP_CBAJ_G0033338.1 mouse_genomes_project 8 75204281 75216310 + MGP_CBAJ_P0088607 Zfp964 protein_coding protein_coding MGP_CBAJ_T0088608.1 MGP_CBAJ_G0033338.1 mouse_genomes_project 8 75208570 75213464 + MGP_CBAJ_P0088608 Zfp964 protein_coding protein_coding MGP_CBAJ_T0088064.1 MGP_CBAJ_G0033165.1 mouse_genomes_project 8 27239141 27252718 + MGP_CBAJ_P0088064 Prosc protein_coding protein_coding MGP_CBAJ_T0088065.1 MGP_CBAJ_G0033165.1 mouse_genomes_project 8 27239141 27246827 + MGP_CBAJ_P0088065 Prosc protein_coding protein_coding MGP_CBAJ_T0089332.1 MGP_CBAJ_G0033555.1 mouse_genomes_project 8 92343694 92350201 - Wdr83 protein_coding retained_intron MGP_CBAJ_T0089333.1 MGP_CBAJ_G0033555.1 mouse_genomes_project 8 92343694 92350130 - Wdr83 protein_coding retained_intron MGP_CBAJ_T0089334.1 MGP_CBAJ_G0033555.1 mouse_genomes_project 8 92343694 92350244 - MGP_CBAJ_P0089334 Wdr83 protein_coding protein_coding MGP_CBAJ_T0089335.1 MGP_CBAJ_G0033555.1 mouse_genomes_project 8 92343695 92349413 - Wdr83 protein_coding retained_intron MGP_CBAJ_T0089336.1 MGP_CBAJ_G0033555.1 mouse_genomes_project 8 92343696 92344767 - MGP_CBAJ_P0089336 Wdr83 protein_coding protein_coding MGP_CBAJ_T0089337.1 MGP_CBAJ_G0033555.1 mouse_genomes_project 8 92343697 92344951 - Wdr83 protein_coding retained_intron MGP_CBAJ_T0089338.1 MGP_CBAJ_G0033555.1 mouse_genomes_project 8 92343711 92350801 - Wdr83 protein_coding retained_intron MGP_CBAJ_T0089339.1 MGP_CBAJ_G0033555.1 mouse_genomes_project 8 92344487 92350171 - MGP_CBAJ_P0089339 Wdr83 protein_coding protein_coding MGP_CBAJ_T0089340.1 MGP_CBAJ_G0033555.1 mouse_genomes_project 8 92344783 92350172 - MGP_CBAJ_P0089340 Wdr83 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089341.1 MGP_CBAJ_G0033555.1 mouse_genomes_project 8 92349192 92350167 - Wdr83 protein_coding retained_intron MGP_CBAJ_T0090451.1 MGP_CBAJ_G0033921.1 mouse_genomes_project 8 136630431 136633401 - MGP_CBAJ_P0090451 Acta1 protein_coding protein_coding MGP_CBAJ_T0090312.1 MGP_CBAJ_G0033883.1 mouse_genomes_project 8 134960463 134972165 - MGP_CBAJ_P0090312 Mvd protein_coding protein_coding MGP_CBAJ_T0089441.1 MGP_CBAJ_G0033590.1 mouse_genomes_project 8 98943282 99001346 + MGP_CBAJ_P0089441 Rbl2 protein_coding protein_coding MGP_CBAJ_T0089442.1 MGP_CBAJ_G0033590.1 mouse_genomes_project 8 98943319 98953196 + Rbl2 protein_coding retained_intron MGP_CBAJ_T0089443.1 MGP_CBAJ_G0033590.1 mouse_genomes_project 8 98981835 98990382 + Rbl2 protein_coding retained_intron MGP_CBAJ_T0089444.1 MGP_CBAJ_G0033590.1 mouse_genomes_project 8 98981872 98989328 + Rbl2 protein_coding processed_transcript MGP_CBAJ_T0089446.1 MGP_CBAJ_G0033590.1 mouse_genomes_project 8 98987514 98991122 + Rbl2 protein_coding retained_intron MGP_CBAJ_T0089447.1 MGP_CBAJ_G0033590.1 mouse_genomes_project 8 98988933 98991062 + Rbl2 protein_coding retained_intron MGP_CBAJ_T0089448.1 MGP_CBAJ_G0033590.1 mouse_genomes_project 8 98990406 98991384 + Rbl2 protein_coding retained_intron MGP_CBAJ_T0090091.1 MGP_CBAJ_G0033820.1 mouse_genomes_project 8 127126989 127156920 - MGP_CBAJ_P0090091 Maf protein_coding protein_coding MGP_CBAJ_T0090092.1 MGP_CBAJ_G0033820.1 mouse_genomes_project 8 127147356 127157612 - MGP_CBAJ_P0090092 Maf protein_coding protein_coding MGP_CBAJ_T0089798.1 MGP_CBAJ_G0033721.1 mouse_genomes_project 8 115749788 115751636 + MGP_CBAJ_P0089798 Thap11 protein_coding protein_coding MGP_CBAJ_T0088105.1 MGP_CBAJ_G0033189.1 mouse_genomes_project 8 34508715 34548032 + MGP_CBAJ_P0088105 Tex15 protein_coding protein_coding MGP_CBAJ_T0088106.1 MGP_CBAJ_G0033189.1 mouse_genomes_project 8 34509299 34582889 + MGP_CBAJ_P0088106 Tex15 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088107.1 MGP_CBAJ_G0033189.1 mouse_genomes_project 8 34509299 34569620 + MGP_CBAJ_P0088107 Tex15 protein_coding protein_coding MGP_CBAJ_T0088108.1 MGP_CBAJ_G0033189.1 mouse_genomes_project 8 34566605 34582889 + MGP_CBAJ_P0088108 Tex15 protein_coding protein_coding MGP_CBAJ_T0102225.1 MGP_CBAJ_G0040254.1 mouse_genomes_project 8 18124650 18131997 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0088451.1 MGP_CBAJ_G0033296.1 mouse_genomes_project 8 65109631 65154014 + MGP_CBAJ_P0088451 Mfap3l protein_coding protein_coding MGP_CBAJ_T0088452.1 MGP_CBAJ_G0033296.1 mouse_genomes_project 8 65109664 65155810 + MGP_CBAJ_P0088452 Mfap3l protein_coding protein_coding MGP_CBAJ_T0088453.1 MGP_CBAJ_G0033296.1 mouse_genomes_project 8 65134232 65151546 + MGP_CBAJ_P0088453 Mfap3l protein_coding protein_coding MGP_CBAJ_T0088454.1 MGP_CBAJ_G0033296.1 mouse_genomes_project 8 65134668 65151442 + MGP_CBAJ_P0088454 Mfap3l protein_coding protein_coding MGP_CBAJ_T0015712.1 MGP_CBAJ_G0013824.1 mouse_genomes_project 8 1025853 1032209 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098468.1 MGP_CBAJ_G0036729.1 mouse_genomes_project 8 135656661 135658798 + 2810013P06Rik sense_intronic sense_intronic MGP_CBAJ_T0088356.1 MGP_CBAJ_G0033262.1 mouse_genomes_project 8 50275769 50278000 + MGP_CBAJ_P0088356 protein_coding protein_coding MGP_CBAJ_T0089891.1 MGP_CBAJ_G0033756.1 mouse_genomes_project 8 117258971 117298022 + MGP_CBAJ_P0089891 Cyb5b protein_coding protein_coding MGP_CBAJ_T0010865.1 MGP_CBAJ_G0009003.1 mouse_genomes_project 8 92172087 92172196 - Gm24197 miRNA miRNA MGP_CBAJ_T0008970.1 MGP_CBAJ_G0007205.1 mouse_genomes_project 8 10811684 10825442 - Gm15348 lincRNA lincRNA MGP_CBAJ_T0087839.1 MGP_CBAJ_G0033078.1 mouse_genomes_project 8 17899281 17902212 - MGP_CBAJ_P0087839 Defb12 protein_coding protein_coding MGP_CBAJ_T0088144.1 MGP_CBAJ_G0033199.1 mouse_genomes_project 8 35207689 35228587 + MGP_CBAJ_P0088144 Saraf protein_coding protein_coding MGP_CBAJ_T0088049.1 MGP_CBAJ_G0033161.1 mouse_genomes_project 8 26173657 26199573 + MGP_CBAJ_P0088049 Rnf170 protein_coding protein_coding MGP_CBAJ_T0088050.1 MGP_CBAJ_G0033161.1 mouse_genomes_project 8 26173667 26197000 + MGP_CBAJ_P0088050 Rnf170 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088051.1 MGP_CBAJ_G0033161.1 mouse_genomes_project 8 26173670 26196799 + MGP_CBAJ_P0088051 Rnf170 protein_coding protein_coding MGP_CBAJ_T0088052.1 MGP_CBAJ_G0033161.1 mouse_genomes_project 8 26173675 26183419 + MGP_CBAJ_P0088052 Rnf170 protein_coding protein_coding MGP_CBAJ_T0088053.1 MGP_CBAJ_G0033161.1 mouse_genomes_project 8 26173763 26183810 + MGP_CBAJ_P0088053 Rnf170 protein_coding protein_coding MGP_CBAJ_T0088054.1 MGP_CBAJ_G0033161.1 mouse_genomes_project 8 26173853 26198345 + MGP_CBAJ_P0088054 Rnf170 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088055.1 MGP_CBAJ_G0033161.1 mouse_genomes_project 8 26173951 26183419 + MGP_CBAJ_P0088055 Rnf170 protein_coding protein_coding MGP_CBAJ_T0088056.1 MGP_CBAJ_G0033161.1 mouse_genomes_project 8 26174767 26180506 + MGP_CBAJ_P0088056 Rnf170 protein_coding protein_coding MGP_CBAJ_T0088057.1 MGP_CBAJ_G0033161.1 mouse_genomes_project 8 26178144 26196753 + MGP_CBAJ_P0088057 Rnf170 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087863.1 MGP_CBAJ_G0033100.1 mouse_genomes_project 8 21358936 21359341 - MGP_CBAJ_P0087863 Defb9 protein_coding protein_coding MGP_CBAJ_T0090458.1 MGP_CBAJ_G0033926.1 mouse_genomes_project 8 137032197 137149709 + MGP_CBAJ_P0090458 Galnt2 protein_coding protein_coding MGP_CBAJ_T0090459.1 MGP_CBAJ_G0033926.1 mouse_genomes_project 8 137032314 137138308 + Galnt2 protein_coding processed_transcript MGP_CBAJ_T0090460.1 MGP_CBAJ_G0033926.1 mouse_genomes_project 8 137095904 137124525 + Galnt2 protein_coding processed_transcript MGP_CBAJ_T0090461.1 MGP_CBAJ_G0033926.1 mouse_genomes_project 8 137096167 137149711 + Galnt2 protein_coding processed_transcript MGP_CBAJ_T0088894.1 MGP_CBAJ_G0033423.1 mouse_genomes_project 8 77391945 77396111 + MGP_CBAJ_P0088894 Pgls protein_coding protein_coding MGP_CBAJ_T0088895.1 MGP_CBAJ_G0033423.1 mouse_genomes_project 8 77391947 77402431 + MGP_CBAJ_P0088895 Pgls protein_coding nonsense_mediated_decay MGP_CBAJ_T0088896.1 MGP_CBAJ_G0033423.1 mouse_genomes_project 8 77391974 77395508 + Pgls protein_coding retained_intron MGP_CBAJ_T0088897.1 MGP_CBAJ_G0033423.1 mouse_genomes_project 8 77392000 77394948 + MGP_CBAJ_P0088897 Pgls protein_coding protein_coding MGP_CBAJ_T0010861.1 MGP_CBAJ_G0008999.1 mouse_genomes_project 8 91451861 91451948 + Mir27a miRNA miRNA MGP_CBAJ_T0090366.1 MGP_CBAJ_G0033898.1 mouse_genomes_project 8 135719663 135725800 + MGP_CBAJ_P0090366 Rpl13 protein_coding protein_coding MGP_CBAJ_T0090367.1 MGP_CBAJ_G0033898.1 mouse_genomes_project 8 135719972 135725805 + MGP_CBAJ_P0090367 Rpl13 protein_coding unknown_likely_coding MGP_CBAJ_T0090368.1 MGP_CBAJ_G0033898.1 mouse_genomes_project 8 135723206 135724197 + Rpl13 protein_coding retained_intron MGP_CBAJ_T0090369.1 MGP_CBAJ_G0033898.1 mouse_genomes_project 8 135723208 135725020 + Rpl13 protein_coding retained_intron MGP_CBAJ_T0090370.1 MGP_CBAJ_G0033898.1 mouse_genomes_project 8 135723208 135725800 + Rpl13 protein_coding retained_intron MGP_CBAJ_T0088045.1 MGP_CBAJ_G0033159.1 mouse_genomes_project 8 26041504 26058726 - MGP_CBAJ_P0088045 Fnta protein_coding protein_coding MGP_CBAJ_T0090337.1 MGP_CBAJ_G0033889.1 mouse_genomes_project 8 135122033 135124304 - MGP_CBAJ_P0090337 Aprt protein_coding protein_coding MGP_CBAJ_T0090467.1 MGP_CBAJ_G0033928.1 mouse_genomes_project 8 137347683 137378925 + MGP_CBAJ_P0090467 Cog2 protein_coding protein_coding MGP_CBAJ_T0090468.1 MGP_CBAJ_G0033928.1 mouse_genomes_project 8 137347720 137356848 + MGP_CBAJ_P0090468 Cog2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090469.1 MGP_CBAJ_G0033928.1 mouse_genomes_project 8 137347721 137372691 + Cog2 protein_coding retained_intron MGP_CBAJ_T0090470.1 MGP_CBAJ_G0033928.1 mouse_genomes_project 8 137347735 137356820 + MGP_CBAJ_P0090470 Cog2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090471.1 MGP_CBAJ_G0033928.1 mouse_genomes_project 8 137362125 137371310 + Cog2 protein_coding retained_intron MGP_CBAJ_T0089181.1 MGP_CBAJ_G0033524.1 mouse_genomes_project 8 91501086 91513384 - MGP_CBAJ_P0089181 Ccdc130 protein_coding protein_coding MGP_CBAJ_T0089182.1 MGP_CBAJ_G0033524.1 mouse_genomes_project 8 91501095 91504700 - Ccdc130 protein_coding retained_intron MGP_CBAJ_T0089183.1 MGP_CBAJ_G0033524.1 mouse_genomes_project 8 91501908 91509611 - MGP_CBAJ_P0089183 Ccdc130 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089184.1 MGP_CBAJ_G0033524.1 mouse_genomes_project 8 91503189 91504939 - Ccdc130 protein_coding retained_intron MGP_CBAJ_T0089185.1 MGP_CBAJ_G0033524.1 mouse_genomes_project 8 91506700 91513146 - MGP_CBAJ_P0089185 Ccdc130 protein_coding protein_coding MGP_CBAJ_T0089186.1 MGP_CBAJ_G0033524.1 mouse_genomes_project 8 91506974 91513143 - Ccdc130 protein_coding retained_intron MGP_CBAJ_T0100829.1 MGP_CBAJ_G0039084.1 mouse_genomes_project 8 104121067 104121202 - Gm26265 snoRNA snoRNA MGP_CBAJ_T0088077.1 MGP_CBAJ_G0033171.1 mouse_genomes_project 8 27484796 27503079 + MGP_CBAJ_P0088077 Eif4ebp1 protein_coding protein_coding MGP_CBAJ_T0088239.1 MGP_CBAJ_G0033230.1 mouse_genomes_project 8 45437091 45451293 - MGP_CBAJ_P0088239 Triml1 protein_coding protein_coding MGP_CBAJ_T0089892.1 MGP_CBAJ_G0033757.1 mouse_genomes_project 8 117431715 117468714 + Nfat5 protein_coding retained_intron MGP_CBAJ_T0089893.1 MGP_CBAJ_G0033757.1 mouse_genomes_project 8 117431715 117512397 + MGP_CBAJ_P0089893 Nfat5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089894.1 MGP_CBAJ_G0033757.1 mouse_genomes_project 8 117431715 117519673 + MGP_CBAJ_P0089894 Nfat5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089895.1 MGP_CBAJ_G0033757.1 mouse_genomes_project 8 117431754 117467364 + Nfat5 protein_coding retained_intron MGP_CBAJ_T0089896.1 MGP_CBAJ_G0033757.1 mouse_genomes_project 8 117431804 117519664 + MGP_CBAJ_P0089896 Nfat5 protein_coding protein_coding MGP_CBAJ_T0089897.1 MGP_CBAJ_G0033757.1 mouse_genomes_project 8 117431804 117512348 + MGP_CBAJ_P0089897 Nfat5 protein_coding protein_coding MGP_CBAJ_T0089898.1 MGP_CBAJ_G0033757.1 mouse_genomes_project 8 117432071 117513322 + MGP_CBAJ_P0089898 Nfat5 protein_coding protein_coding MGP_CBAJ_T0089899.1 MGP_CBAJ_G0033757.1 mouse_genomes_project 8 117479022 117496079 + Nfat5 protein_coding retained_intron MGP_CBAJ_T0089900.1 MGP_CBAJ_G0033757.1 mouse_genomes_project 8 117479022 117507575 + Nfat5 protein_coding retained_intron MGP_CBAJ_T0089901.1 MGP_CBAJ_G0033757.1 mouse_genomes_project 8 117479427 117510829 + MGP_CBAJ_P0089901 Nfat5 protein_coding protein_coding MGP_CBAJ_T0089902.1 MGP_CBAJ_G0033757.1 mouse_genomes_project 8 117485132 117501939 + MGP_CBAJ_P0089902 Nfat5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089903.1 MGP_CBAJ_G0033757.1 mouse_genomes_project 8 117496158 117513700 + MGP_CBAJ_P0089903 Nfat5 protein_coding protein_coding MGP_CBAJ_T0089882.1 MGP_CBAJ_G0033754.1 mouse_genomes_project 8 117150639 117154769 - MGP_CBAJ_P0089882 Tmed6 protein_coding protein_coding MGP_CBAJ_T0088865.1 MGP_CBAJ_G0033412.1 mouse_genomes_project 8 77229619 77236582 - MGP_CBAJ_P0088865 Abhd8 protein_coding protein_coding MGP_CBAJ_T0088893.1 MGP_CBAJ_G0033422.1 mouse_genomes_project 8 77369175 77386520 + MGP_CBAJ_P0088893 Slc27a1 protein_coding protein_coding MGP_CBAJ_T0010840.1 MGP_CBAJ_G0008978.1 mouse_genomes_project 8 42287718 42287773 - Mir7666 miRNA miRNA MGP_CBAJ_T0088551.1 MGP_CBAJ_G0033325.1 mouse_genomes_project 8 72990008 73299965 - MGP_CBAJ_P0088551 Psd3 protein_coding protein_coding MGP_CBAJ_T0088552.1 MGP_CBAJ_G0033325.1 mouse_genomes_project 8 72990008 73299965 - MGP_CBAJ_P0088552 Psd3 protein_coding protein_coding MGP_CBAJ_T0088553.1 MGP_CBAJ_G0033325.1 mouse_genomes_project 8 72990015 73113952 - MGP_CBAJ_P0088553 Psd3 protein_coding protein_coding MGP_CBAJ_T0088554.1 MGP_CBAJ_G0033325.1 mouse_genomes_project 8 72996973 73299965 - MGP_CBAJ_P0088554 Psd3 protein_coding protein_coding MGP_CBAJ_T0088555.1 MGP_CBAJ_G0033325.1 mouse_genomes_project 8 72997807 73223310 - MGP_CBAJ_P0088555 Psd3 protein_coding protein_coding MGP_CBAJ_T0088556.1 MGP_CBAJ_G0033325.1 mouse_genomes_project 8 73012450 73113890 - MGP_CBAJ_P0088556 Psd3 protein_coding protein_coding MGP_CBAJ_T0088557.1 MGP_CBAJ_G0033325.1 mouse_genomes_project 8 73090892 73400338 - Psd3 protein_coding retained_intron MGP_CBAJ_T0088558.1 MGP_CBAJ_G0033325.1 mouse_genomes_project 8 73187517 73214582 - Psd3 protein_coding processed_transcript MGP_CBAJ_T0088559.1 MGP_CBAJ_G0033325.1 mouse_genomes_project 8 73214109 73269867 - Psd3 protein_coding retained_intron MGP_CBAJ_T0010838.1 MGP_CBAJ_G0008976.1 mouse_genomes_project 8 37082150 37082277 - Gm44474 miRNA miRNA MGP_CBAJ_T0088656.1 MGP_CBAJ_G0033356.1 mouse_genomes_project 8 75641709 75675438 - MGP_CBAJ_P0088656 Ncan protein_coding protein_coding MGP_CBAJ_T0010833.1 MGP_CBAJ_G0008971.1 mouse_genomes_project 8 22786418 22786546 + Mir486 miRNA miRNA MGP_CBAJ_T0088348.1 MGP_CBAJ_G0033259.1 mouse_genomes_project 8 49496729 49624885 + MGP_CBAJ_P0088348 Irf2 protein_coding protein_coding MGP_CBAJ_T0090383.1 MGP_CBAJ_G0033902.1 mouse_genomes_project 8 135846221 135859403 - MGP_CBAJ_P0090383 Chmp1a protein_coding protein_coding MGP_CBAJ_T0090384.1 MGP_CBAJ_G0033902.1 mouse_genomes_project 8 135850769 135856412 - Chmp1a protein_coding retained_intron MGP_CBAJ_T0090385.1 MGP_CBAJ_G0033902.1 mouse_genomes_project 8 135856229 135859406 - Chmp1a protein_coding retained_intron MGP_CBAJ_T0011595.1 MGP_CBAJ_G0009733.1 mouse_genomes_project 8 90973770 90974057 + Gm22024 misc_RNA misc_RNA MGP_CBAJ_T0087545.1 MGP_CBAJ_G0032989.1 mouse_genomes_project 8 872306 878651 - MGP_CBAJ_P0087545 Cd209e protein_coding protein_coding MGP_CBAJ_T0089853.1 MGP_CBAJ_G0033741.1 mouse_genomes_project 8 116386276 116396848 + MGP_CBAJ_P0089853 Zfp90 protein_coding protein_coding MGP_CBAJ_T0090535.1 MGP_CBAJ_G0033955.1 mouse_genomes_project 8 140153333 140182930 - MGP_CBAJ_P0090535 Rbm34 protein_coding protein_coding MGP_CBAJ_T0088373.1 MGP_CBAJ_G0033269.1 mouse_genomes_project 8 50736052 50736726 + MGP_CBAJ_P0088373 Cldn24 protein_coding protein_coding MGP_CBAJ_T0089043.1 MGP_CBAJ_G0033471.1 mouse_genomes_project 8 85084935 85338260 + MGP_CBAJ_P0089043 Slc10a7 protein_coding unknown_likely_coding MGP_CBAJ_T0087991.1 MGP_CBAJ_G0033146.1 mouse_genomes_project 8 25475601 25522352 + MGP_CBAJ_P0087991 Fgfr1 protein_coding protein_coding MGP_CBAJ_T0087992.1 MGP_CBAJ_G0033146.1 mouse_genomes_project 8 25480717 25544552 + MGP_CBAJ_P0087992 Fgfr1 protein_coding protein_coding MGP_CBAJ_T0087993.1 MGP_CBAJ_G0033146.1 mouse_genomes_project 8 25480717 25544552 + MGP_CBAJ_P0087993 Fgfr1 protein_coding protein_coding MGP_CBAJ_T0087994.1 MGP_CBAJ_G0033146.1 mouse_genomes_project 8 25480737 25544552 + MGP_CBAJ_P0087994 Fgfr1 protein_coding protein_coding MGP_CBAJ_T0087995.1 MGP_CBAJ_G0033146.1 mouse_genomes_project 8 25480740 25543618 + MGP_CBAJ_P0087995 Fgfr1 protein_coding protein_coding MGP_CBAJ_T0087996.1 MGP_CBAJ_G0033146.1 mouse_genomes_project 8 25480766 25543107 + MGP_CBAJ_P0087996 Fgfr1 protein_coding unknown_likely_coding MGP_CBAJ_T0087997.1 MGP_CBAJ_G0033146.1 mouse_genomes_project 8 25480840 25522442 + Fgfr1 protein_coding processed_transcript MGP_CBAJ_T0087998.1 MGP_CBAJ_G0033146.1 mouse_genomes_project 8 25481264 25543616 + MGP_CBAJ_P0087998 Fgfr1 protein_coding protein_coding MGP_CBAJ_T0087999.1 MGP_CBAJ_G0033146.1 mouse_genomes_project 8 25481784 25522513 + MGP_CBAJ_P0087999 Fgfr1 protein_coding protein_coding MGP_CBAJ_T0088000.1 MGP_CBAJ_G0033146.1 mouse_genomes_project 8 25494167 25543414 + MGP_CBAJ_P0088000 Fgfr1 protein_coding protein_coding MGP_CBAJ_T0088001.1 MGP_CBAJ_G0033146.1 mouse_genomes_project 8 25522400 25539130 + Fgfr1 protein_coding processed_transcript MGP_CBAJ_T0088002.1 MGP_CBAJ_G0033146.1 mouse_genomes_project 8 25524857 25530462 + Fgfr1 protein_coding retained_intron MGP_CBAJ_T0088003.1 MGP_CBAJ_G0033146.1 mouse_genomes_project 8 25530152 25543622 + Fgfr1 protein_coding retained_intron MGP_CBAJ_T0088004.1 MGP_CBAJ_G0033146.1 mouse_genomes_project 8 25533597 25543621 + Fgfr1 protein_coding retained_intron MGP_CBAJ_T0088005.1 MGP_CBAJ_G0033146.1 mouse_genomes_project 8 25538409 25541232 + Fgfr1 protein_coding retained_intron MGP_CBAJ_T0088006.1 MGP_CBAJ_G0033146.1 mouse_genomes_project 8 25538646 25541294 + Fgfr1 protein_coding retained_intron MGP_CBAJ_T0100812.1 MGP_CBAJ_G0039067.1 mouse_genomes_project 8 72096271 72096400 - Gm25275 snoRNA snoRNA MGP_CBAJ_T0089692.1 MGP_CBAJ_G0033676.1 mouse_genomes_project 8 114373670 114376926 - MGP_CBAJ_P0089692 Rrad protein_coding protein_coding MGP_CBAJ_T0011601.1 MGP_CBAJ_G0009739.1 mouse_genomes_project 8 121116916 121117207 + Gm22701 misc_RNA misc_RNA MGP_CBAJ_T0089314.1 MGP_CBAJ_G0033552.1 mouse_genomes_project 8 92328957 92335909 + MGP_CBAJ_P0089314 Fbxw9 protein_coding protein_coding MGP_CBAJ_T0089315.1 MGP_CBAJ_G0033552.1 mouse_genomes_project 8 92328958 92335911 + Fbxw9 protein_coding retained_intron MGP_CBAJ_T0089316.1 MGP_CBAJ_G0033552.1 mouse_genomes_project 8 92328999 92333594 + Fbxw9 protein_coding retained_intron MGP_CBAJ_T0089317.1 MGP_CBAJ_G0033552.1 mouse_genomes_project 8 92329431 92335904 + Fbxw9 protein_coding retained_intron MGP_CBAJ_T0089318.1 MGP_CBAJ_G0033552.1 mouse_genomes_project 8 92329469 92335674 + Fbxw9 protein_coding processed_transcript MGP_CBAJ_T0089319.1 MGP_CBAJ_G0033552.1 mouse_genomes_project 8 92333376 92335118 + Fbxw9 protein_coding retained_intron MGP_CBAJ_T0089320.1 MGP_CBAJ_G0033552.1 mouse_genomes_project 8 92334360 92335155 + Fbxw9 protein_coding processed_transcript MGP_CBAJ_T0089321.1 MGP_CBAJ_G0033552.1 mouse_genomes_project 8 92334414 92335157 + Fbxw9 protein_coding retained_intron MGP_CBAJ_T0089322.1 MGP_CBAJ_G0033552.1 mouse_genomes_project 8 92334855 92335691 + Fbxw9 protein_coding retained_intron MGP_CBAJ_T0088609.1 MGP_CBAJ_G0033339.1 mouse_genomes_project 8 75241148 75245540 - MGP_CBAJ_P0088609 Zfp869 protein_coding protein_coding MGP_CBAJ_T0088580.1 MGP_CBAJ_G0033330.1 mouse_genomes_project 8 74473521 74525724 - MGP_CBAJ_P0088580 Slc18a1 protein_coding protein_coding MGP_CBAJ_T0088581.1 MGP_CBAJ_G0033330.1 mouse_genomes_project 8 74499645 74512523 - Slc18a1 protein_coding retained_intron MGP_CBAJ_T0088582.1 MGP_CBAJ_G0033330.1 mouse_genomes_project 8 74504700 74510800 - Slc18a1 protein_coding retained_intron MGP_CBAJ_T0088583.1 MGP_CBAJ_G0033330.1 mouse_genomes_project 8 74510392 74525737 - Slc18a1 protein_coding processed_transcript MGP_CBAJ_T0088584.1 MGP_CBAJ_G0033330.1 mouse_genomes_project 8 74510460 74525711 - Slc18a1 protein_coding processed_transcript MGP_CBAJ_T0088229.1 MGP_CBAJ_G0033226.1 mouse_genomes_project 8 43260085 43282981 - MGP_CBAJ_P0088229 Fgl1 protein_coding protein_coding MGP_CBAJ_T0088230.1 MGP_CBAJ_G0033226.1 mouse_genomes_project 8 43266265 43282978 - Fgl1 protein_coding retained_intron MGP_CBAJ_T0087714.1 MGP_CBAJ_G0033037.1 mouse_genomes_project 8 11193920 11206648 + MGP_CBAJ_P0087714 Proz protein_coding protein_coding MGP_CBAJ_T0089563.1 MGP_CBAJ_G0033630.1 mouse_genomes_project 8 103040272 103041855 + MGP_CBAJ_P0089563 Ccl17 protein_coding protein_coding MGP_CBAJ_T0099580.1 MGP_CBAJ_G0037835.1 mouse_genomes_project 8 135062043 135062150 - Gm26497 snRNA snRNA MGP_CBAJ_T0010863.1 MGP_CBAJ_G0009001.1 mouse_genomes_project 8 91451992 91452075 - Mir3074-2 miRNA miRNA MGP_CBAJ_T0087551.1 MGP_CBAJ_G0032992.1 mouse_genomes_project 8 975501 981533 - MGP_CBAJ_P0087551 Cd209c protein_coding protein_coding MGP_CBAJ_T0087552.1 MGP_CBAJ_G0032992.1 mouse_genomes_project 8 975573 983672 - MGP_CBAJ_P0087552 Cd209c protein_coding nonsense_mediated_decay MGP_CBAJ_T0090163.1 MGP_CBAJ_G0033853.1 mouse_genomes_project 8 132034431 132084713 + MGP_CBAJ_P0090163 Usp10 protein_coding protein_coding MGP_CBAJ_T0090164.1 MGP_CBAJ_G0033853.1 mouse_genomes_project 8 132034885 132084718 + MGP_CBAJ_P0090164 Usp10 protein_coding protein_coding MGP_CBAJ_T0090165.1 MGP_CBAJ_G0033853.1 mouse_genomes_project 8 132034904 132079665 + Usp10 protein_coding processed_transcript MGP_CBAJ_T0090166.1 MGP_CBAJ_G0033853.1 mouse_genomes_project 8 132034928 132078972 + MGP_CBAJ_P0090166 Usp10 protein_coding protein_coding MGP_CBAJ_T0090167.1 MGP_CBAJ_G0033853.1 mouse_genomes_project 8 132071076 132075717 + Usp10 protein_coding processed_transcript MGP_CBAJ_T0090168.1 MGP_CBAJ_G0033853.1 mouse_genomes_project 8 132075301 132080329 + Usp10 protein_coding retained_intron MGP_CBAJ_T0090169.1 MGP_CBAJ_G0033853.1 mouse_genomes_project 8 132075412 132079441 + Usp10 protein_coding retained_intron MGP_CBAJ_T0090170.1 MGP_CBAJ_G0033853.1 mouse_genomes_project 8 132079000 132082355 + Usp10 protein_coding retained_intron MGP_CBAJ_T0090171.1 MGP_CBAJ_G0033853.1 mouse_genomes_project 8 132079689 132081849 + Usp10 protein_coding retained_intron MGP_CBAJ_T0090172.1 MGP_CBAJ_G0033853.1 mouse_genomes_project 8 132080312 132083907 + MGP_CBAJ_P0090172 Usp10 protein_coding protein_coding MGP_CBAJ_T0090173.1 MGP_CBAJ_G0033853.1 mouse_genomes_project 8 132083243 132084715 + Usp10 protein_coding processed_transcript MGP_CBAJ_T0087914.1 MGP_CBAJ_G0033124.1 mouse_genomes_project 8 22379575 22400008 - MGP_CBAJ_P0087914 Ap3m2 protein_coding unknown_likely_coding MGP_CBAJ_T0087843.1 MGP_CBAJ_G0033081.1 mouse_genomes_project 8 17944403 17946093 + MGP_CBAJ_P0087843 Spag11a protein_coding protein_coding MGP_CBAJ_T0088970.1 MGP_CBAJ_G0033443.1 mouse_genomes_project 8 78266194 78268819 + MGP_CBAJ_P0088970 Klf2 protein_coding protein_coding MGP_CBAJ_T0018222.1 MGP_CBAJ_G0015461.1 mouse_genomes_project 8 92094059 92095277 + 1700122E12Rik processed_transcript processed_transcript MGP_CBAJ_T0018223.1 MGP_CBAJ_G0015461.1 mouse_genomes_project 8 92094309 92095078 + 1700122E12Rik processed_transcript processed_transcript MGP_CBAJ_T0088616.1 MGP_CBAJ_G0033344.1 mouse_genomes_project 8 75340113 75353254 + MGP_CBAJ_P0088616 Gmip protein_coding protein_coding MGP_CBAJ_T0088617.1 MGP_CBAJ_G0033344.1 mouse_genomes_project 8 75340124 75350377 + MGP_CBAJ_P0088617 Gmip protein_coding protein_coding MGP_CBAJ_T0088618.1 MGP_CBAJ_G0033344.1 mouse_genomes_project 8 75341925 75345267 + Gmip protein_coding processed_transcript MGP_CBAJ_T0088619.1 MGP_CBAJ_G0033344.1 mouse_genomes_project 8 75342081 75343039 + Gmip protein_coding processed_transcript MGP_CBAJ_T0088620.1 MGP_CBAJ_G0033344.1 mouse_genomes_project 8 75344677 75345515 + Gmip protein_coding retained_intron MGP_CBAJ_T0088621.1 MGP_CBAJ_G0033344.1 mouse_genomes_project 8 75345298 75347654 + Gmip protein_coding processed_transcript MGP_CBAJ_T0088622.1 MGP_CBAJ_G0033344.1 mouse_genomes_project 8 75348113 75349000 + Gmip protein_coding retained_intron MGP_CBAJ_T0088623.1 MGP_CBAJ_G0033344.1 mouse_genomes_project 8 75349233 75350382 + MGP_CBAJ_P0088623 Gmip protein_coding protein_coding MGP_CBAJ_T0088624.1 MGP_CBAJ_G0033344.1 mouse_genomes_project 8 75349469 75352712 + Gmip protein_coding processed_transcript MGP_CBAJ_T0002299.1 MGP_CBAJ_G0002212.1 mouse_genomes_project 8 117221351 117222134 + TEC TEC MGP_CBAJ_T0088730.1 MGP_CBAJ_G0033369.1 mouse_genomes_project 8 75893329 75919247 - MGP_CBAJ_P0088730 Upf1 protein_coding protein_coding MGP_CBAJ_T0088731.1 MGP_CBAJ_G0033369.1 mouse_genomes_project 8 75894201 75918989 - MGP_CBAJ_P0088731 Upf1 protein_coding unknown_likely_coding MGP_CBAJ_T0015737.1 MGP_CBAJ_G0013849.1 mouse_genomes_project 8 36325568 36326101 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0088860.1 MGP_CBAJ_G0033411.1 mouse_genomes_project 8 77164097 77167968 + MGP_CBAJ_P0088860 Ankle1 protein_coding protein_coding MGP_CBAJ_T0088861.1 MGP_CBAJ_G0033411.1 mouse_genomes_project 8 77164103 77167932 + Ankle1 protein_coding retained_intron MGP_CBAJ_T0088862.1 MGP_CBAJ_G0033411.1 mouse_genomes_project 8 77164109 77167566 + Ankle1 protein_coding retained_intron MGP_CBAJ_T0088863.1 MGP_CBAJ_G0033411.1 mouse_genomes_project 8 77164111 77167573 + MGP_CBAJ_P0088863 Ankle1 protein_coding protein_coding MGP_CBAJ_T0088864.1 MGP_CBAJ_G0033411.1 mouse_genomes_project 8 77165778 77167245 + Ankle1 protein_coding retained_intron MGP_CBAJ_T0010878.1 MGP_CBAJ_G0009016.1 mouse_genomes_project 8 114462814 114462889 - Gm44328 miRNA miRNA MGP_CBAJ_T0100819.1 MGP_CBAJ_G0039074.1 mouse_genomes_project 8 83522089 83522219 - Gm24838 snoRNA snoRNA MGP_CBAJ_T0089737.1 MGP_CBAJ_G0033694.1 mouse_genomes_project 8 115092300 115101239 - MGP_CBAJ_P0089737 4931428F04Rik protein_coding protein_coding MGP_CBAJ_T0089738.1 MGP_CBAJ_G0033694.1 mouse_genomes_project 8 115092300 115101239 - MGP_CBAJ_P0089738 4931428F04Rik protein_coding protein_coding MGP_CBAJ_T0011602.1 MGP_CBAJ_G0009740.1 mouse_genomes_project 8 123622740 123622845 + Gm22664 misc_RNA misc_RNA MGP_CBAJ_T0089993.1 MGP_CBAJ_G0033791.1 mouse_genomes_project 8 121710965 121753573 - MGP_CBAJ_P0089993 Ddx19b protein_coding protein_coding MGP_CBAJ_T0089994.1 MGP_CBAJ_G0033791.1 mouse_genomes_project 8 121714442 121757516 - MGP_CBAJ_P0089994 Ddx19b protein_coding protein_coding MGP_CBAJ_T0087744.1 MGP_CBAJ_G0033046.1 mouse_genomes_project 8 11578899 11591186 - MGP_CBAJ_P0087744 Atp4b protein_coding protein_coding MGP_CBAJ_T0015729.1 MGP_CBAJ_G0013841.1 mouse_genomes_project 8 20232932 20234055 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0087989.1 MGP_CBAJ_G0033145.1 mouse_genomes_project 8 25052142 25107498 - MGP_CBAJ_P0087989 Tacc1 protein_coding protein_coding MGP_CBAJ_T0087990.1 MGP_CBAJ_G0033145.1 mouse_genomes_project 8 25052142 25107498 - MGP_CBAJ_P0087990 Tacc1 protein_coding protein_coding MGP_CBAJ_T0005322.1 MGP_CBAJ_G0004506.1 mouse_genomes_project 8 136568870 136571103 - 2810455O05Rik antisense antisense MGP_CBAJ_T0008981.1 MGP_CBAJ_G0007213.1 mouse_genomes_project 8 29055809 29057900 + Gm26795 lincRNA lincRNA MGP_CBAJ_T0008982.1 MGP_CBAJ_G0007213.1 mouse_genomes_project 8 29055836 29056613 + Gm26795 lincRNA lincRNA MGP_CBAJ_T0087508.1 MGP_CBAJ_G0032979.1 mouse_genomes_project 8 610140 623073 - Xab2 protein_coding retained_intron MGP_CBAJ_T0087509.1 MGP_CBAJ_G0032979.1 mouse_genomes_project 8 611806 623084 - MGP_CBAJ_P0087509 Xab2 protein_coding protein_coding MGP_CBAJ_T0087510.1 MGP_CBAJ_G0032979.1 mouse_genomes_project 8 611809 623070 - Xab2 protein_coding retained_intron MGP_CBAJ_T0087511.1 MGP_CBAJ_G0032979.1 mouse_genomes_project 8 616036 623038 - MGP_CBAJ_P0087511 Xab2 protein_coding protein_coding MGP_CBAJ_T0087512.1 MGP_CBAJ_G0032979.1 mouse_genomes_project 8 617714 623050 - MGP_CBAJ_P0087512 Xab2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088980.1 MGP_CBAJ_G0033449.1 mouse_genomes_project 8 78473914 78533264 - MGP_CBAJ_P0088980 Med26 protein_coding protein_coding MGP_CBAJ_T0009045.1 MGP_CBAJ_G0007263.1 mouse_genomes_project 8 95740001 95740470 + 9430002A10Rik lincRNA lincRNA MGP_CBAJ_T0009046.1 MGP_CBAJ_G0007263.1 mouse_genomes_project 8 95740001 95740476 + 9430002A10Rik lincRNA lincRNA MGP_CBAJ_T0089164.1 MGP_CBAJ_G0033517.1 mouse_genomes_project 8 91370084 91376586 + MGP_CBAJ_P0089164 Podnl1 protein_coding protein_coding MGP_CBAJ_T0089165.1 MGP_CBAJ_G0033517.1 mouse_genomes_project 8 91371913 91376575 + Podnl1 protein_coding retained_intron MGP_CBAJ_T0088111.1 MGP_CBAJ_G0033192.1 mouse_genomes_project 8 34657391 34678017 + Gsr protein_coding processed_transcript MGP_CBAJ_T0088112.1 MGP_CBAJ_G0033192.1 mouse_genomes_project 8 34658090 34705082 + MGP_CBAJ_P0088112 Gsr protein_coding protein_coding MGP_CBAJ_T0088113.1 MGP_CBAJ_G0033192.1 mouse_genomes_project 8 34673018 34689211 + Gsr protein_coding processed_transcript MGP_CBAJ_T0005320.1 MGP_CBAJ_G0004504.1 mouse_genomes_project 8 134444120 134445092 - Gm27011 antisense antisense MGP_CBAJ_T0090009.1 MGP_CBAJ_G0033794.1 mouse_genomes_project 8 121830571 121882478 + MGP_CBAJ_P0090009 Pdpr protein_coding protein_coding MGP_CBAJ_T0090010.1 MGP_CBAJ_G0033794.1 mouse_genomes_project 8 121830585 121880551 + MGP_CBAJ_P0090010 Pdpr protein_coding nonsense_mediated_decay MGP_CBAJ_T0089284.1 MGP_CBAJ_G0033543.1 mouse_genomes_project 8 92193420 92203019 + MGP_CBAJ_P0089284 Rtbdn protein_coding protein_coding MGP_CBAJ_T0089285.1 MGP_CBAJ_G0033543.1 mouse_genomes_project 8 92193420 92203019 + MGP_CBAJ_P0089285 Rtbdn protein_coding protein_coding MGP_CBAJ_T0089286.1 MGP_CBAJ_G0033543.1 mouse_genomes_project 8 92196180 92203019 + MGP_CBAJ_P0089286 Rtbdn protein_coding protein_coding MGP_CBAJ_T0089287.1 MGP_CBAJ_G0033543.1 mouse_genomes_project 8 92197501 92202927 + MGP_CBAJ_P0089287 Rtbdn protein_coding protein_coding MGP_CBAJ_T0005281.1 MGP_CBAJ_G0004470.1 mouse_genomes_project 8 71505083 71507998 - Gm15354 antisense antisense MGP_CBAJ_T0008979.1 MGP_CBAJ_G0007211.1 mouse_genomes_project 8 27351214 27357979 + lincRNA lincRNA MGP_CBAJ_T0100843.1 MGP_CBAJ_G0039098.1 mouse_genomes_project 8 142159310 142159437 + Gm26100 snoRNA snoRNA MGP_CBAJ_T0089833.1 MGP_CBAJ_G0033735.1 mouse_genomes_project 8 116066425 116073081 - MGP_CBAJ_P0089833 Esrp2 protein_coding protein_coding MGP_CBAJ_T0089834.1 MGP_CBAJ_G0033735.1 mouse_genomes_project 8 116068331 116072920 - MGP_CBAJ_P0089834 Esrp2 protein_coding protein_coding MGP_CBAJ_T0089835.1 MGP_CBAJ_G0033735.1 mouse_genomes_project 8 116068834 116069182 - Esrp2 protein_coding processed_transcript MGP_CBAJ_T0089836.1 MGP_CBAJ_G0033735.1 mouse_genomes_project 8 116068921 116070831 - Esrp2 protein_coding retained_intron MGP_CBAJ_T0089837.1 MGP_CBAJ_G0033735.1 mouse_genomes_project 8 116069374 116070235 - Esrp2 protein_coding retained_intron MGP_CBAJ_T0089838.1 MGP_CBAJ_G0033735.1 mouse_genomes_project 8 116069634 116070235 - Esrp2 protein_coding retained_intron MGP_CBAJ_T0089839.1 MGP_CBAJ_G0033735.1 mouse_genomes_project 8 116069908 116071203 - Esrp2 protein_coding retained_intron MGP_CBAJ_T0089840.1 MGP_CBAJ_G0033735.1 mouse_genomes_project 8 116070065 116071048 - Esrp2 protein_coding retained_intron MGP_CBAJ_T0089841.1 MGP_CBAJ_G0033735.1 mouse_genomes_project 8 116072289 116072792 - Esrp2 protein_coding retained_intron MGP_CBAJ_T0090528.1 MGP_CBAJ_G0033948.1 mouse_genomes_project 8 139043175 139078656 + MGP_CBAJ_P0090528 Kcnk1 protein_coding protein_coding MGP_CBAJ_T0088740.1 MGP_CBAJ_G0033373.1 mouse_genomes_project 8 76062495 76065978 - MGP_CBAJ_P0088740 Tmem59l protein_coding protein_coding MGP_CBAJ_T0089426.1 MGP_CBAJ_G0033583.1 mouse_genomes_project 8 96247554 96256935 - MGP_CBAJ_P0089426 Snx20 protein_coding protein_coding MGP_CBAJ_T0087918.1 MGP_CBAJ_G0033126.1 mouse_genomes_project 8 22603398 22793797 + MGP_CBAJ_P0087918 Ank1 protein_coding protein_coding MGP_CBAJ_T0087919.1 MGP_CBAJ_G0033126.1 mouse_genomes_project 8 22603436 22794358 + MGP_CBAJ_P0087919 Ank1 protein_coding protein_coding MGP_CBAJ_T0087920.1 MGP_CBAJ_G0033126.1 mouse_genomes_project 8 22603690 22792171 + MGP_CBAJ_P0087920 Ank1 protein_coding protein_coding MGP_CBAJ_T0087921.1 MGP_CBAJ_G0033126.1 mouse_genomes_project 8 22666756 22792654 + MGP_CBAJ_P0087921 Ank1 protein_coding protein_coding MGP_CBAJ_T0087922.1 MGP_CBAJ_G0033126.1 mouse_genomes_project 8 22666785 22793145 + MGP_CBAJ_P0087922 Ank1 protein_coding protein_coding MGP_CBAJ_T0087923.1 MGP_CBAJ_G0033126.1 mouse_genomes_project 8 22666888 22793145 + MGP_CBAJ_P0087923 Ank1 protein_coding protein_coding MGP_CBAJ_T0087924.1 MGP_CBAJ_G0033126.1 mouse_genomes_project 8 22692859 22794361 + MGP_CBAJ_P0087924 Ank1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087925.1 MGP_CBAJ_G0033126.1 mouse_genomes_project 8 22692875 22794361 + MGP_CBAJ_P0087925 Ank1 protein_coding protein_coding MGP_CBAJ_T0087926.1 MGP_CBAJ_G0033126.1 mouse_genomes_project 8 22692911 22794361 + MGP_CBAJ_P0087926 Ank1 protein_coding protein_coding MGP_CBAJ_T0087927.1 MGP_CBAJ_G0033126.1 mouse_genomes_project 8 22693125 22793552 + MGP_CBAJ_P0087927 Ank1 protein_coding protein_coding MGP_CBAJ_T0087928.1 MGP_CBAJ_G0033126.1 mouse_genomes_project 8 22693125 22793552 + MGP_CBAJ_P0087928 Ank1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087929.1 MGP_CBAJ_G0033126.1 mouse_genomes_project 8 22729925 22765330 + MGP_CBAJ_P0087929 Ank1 protein_coding protein_coding MGP_CBAJ_T0087930.1 MGP_CBAJ_G0033126.1 mouse_genomes_project 8 22762628 22768831 + Ank1 protein_coding retained_intron MGP_CBAJ_T0087931.1 MGP_CBAJ_G0033126.1 mouse_genomes_project 8 22780814 22793143 + MGP_CBAJ_P0087931 Ank1 protein_coding protein_coding MGP_CBAJ_T0087932.1 MGP_CBAJ_G0033126.1 mouse_genomes_project 8 22780889 22792558 + MGP_CBAJ_P0087932 Ank1 protein_coding protein_coding MGP_CBAJ_T0087933.1 MGP_CBAJ_G0033126.1 mouse_genomes_project 8 22781061 22792169 + MGP_CBAJ_P0087933 Ank1 protein_coding protein_coding MGP_CBAJ_T0087934.1 MGP_CBAJ_G0033126.1 mouse_genomes_project 8 22781877 22792233 + Ank1 protein_coding retained_intron MGP_CBAJ_T0089591.1 MGP_CBAJ_G0033637.1 mouse_genomes_project 8 103245323 103288305 + MGP_CBAJ_P0089591 Adgrg1 protein_coding protein_coding MGP_CBAJ_T0089592.1 MGP_CBAJ_G0033637.1 mouse_genomes_project 8 103255322 103288305 + MGP_CBAJ_P0089592 Adgrg1 protein_coding protein_coding MGP_CBAJ_T0088878.1 MGP_CBAJ_G0033415.1 mouse_genomes_project 8 77252729 77267116 - MGP_CBAJ_P0088878 Ano8 protein_coding protein_coding MGP_CBAJ_T0011597.1 MGP_CBAJ_G0009735.1 mouse_genomes_project 8 99064223 99064488 - Gm23408 misc_RNA misc_RNA MGP_CBAJ_T0087767.1 MGP_CBAJ_G0033055.1 mouse_genomes_project 8 12094509 12113875 + MGP_CBAJ_P0087767 Champ1 protein_coding protein_coding MGP_CBAJ_T0087768.1 MGP_CBAJ_G0033055.1 mouse_genomes_project 8 12094572 12112047 + MGP_CBAJ_P0087768 Champ1 protein_coding protein_coding MGP_CBAJ_T0087898.1 MGP_CBAJ_G0033121.1 mouse_genomes_project 8 22206630 22237436 - MGP_CBAJ_P0087898 Polb protein_coding protein_coding MGP_CBAJ_T0089842.1 MGP_CBAJ_G0033736.1 mouse_genomes_project 8 116088443 116103830 + MGP_CBAJ_P0089842 Pla2g15 protein_coding protein_coding MGP_CBAJ_T0088245.1 MGP_CBAJ_G0033236.1 mouse_genomes_project 8 46031936 46037341 - MGP_CBAJ_P0088245 protein_coding protein_coding MGP_CBAJ_T0089677.1 MGP_CBAJ_G0033672.1 mouse_genomes_project 8 114220063 114235521 - Nae1 protein_coding processed_transcript MGP_CBAJ_T0089678.1 MGP_CBAJ_G0033672.1 mouse_genomes_project 8 114220063 114249642 - MGP_CBAJ_P0089678 Nae1 protein_coding protein_coding MGP_CBAJ_T0089679.1 MGP_CBAJ_G0033672.1 mouse_genomes_project 8 114220063 114249641 - MGP_CBAJ_P0089679 Nae1 protein_coding protein_coding MGP_CBAJ_T0089680.1 MGP_CBAJ_G0033672.1 mouse_genomes_project 8 114220069 114228142 - Nae1 protein_coding retained_intron MGP_CBAJ_T0089681.1 MGP_CBAJ_G0033672.1 mouse_genomes_project 8 114220072 114229196 - Nae1 protein_coding retained_intron MGP_CBAJ_T0089682.1 MGP_CBAJ_G0033672.1 mouse_genomes_project 8 114222235 114228202 - Nae1 protein_coding retained_intron MGP_CBAJ_T0089683.1 MGP_CBAJ_G0033672.1 mouse_genomes_project 8 114228689 114242923 - Nae1 protein_coding retained_intron MGP_CBAJ_T0089684.1 MGP_CBAJ_G0033672.1 mouse_genomes_project 8 114230938 114235553 - Nae1 protein_coding retained_intron MGP_CBAJ_T0089685.1 MGP_CBAJ_G0033672.1 mouse_genomes_project 8 114235244 114249593 - Nae1 protein_coding retained_intron MGP_CBAJ_T0089686.1 MGP_CBAJ_G0033672.1 mouse_genomes_project 8 114235673 114242342 - Nae1 protein_coding retained_intron MGP_CBAJ_T0089687.1 MGP_CBAJ_G0033672.1 mouse_genomes_project 8 114243037 114249619 - Nae1 protein_coding retained_intron MGP_CBAJ_T0089055.1 MGP_CBAJ_G0033474.1 mouse_genomes_project 8 85854206 85894371 - MGP_CBAJ_P0089055 1700011L22Rik protein_coding protein_coding MGP_CBAJ_T0087896.1 MGP_CBAJ_G0033119.1 mouse_genomes_project 8 22141470 22165068 - MGP_CBAJ_P0087896 Vdac3-ps1 protein_coding protein_coding MGP_CBAJ_T0098464.1 MGP_CBAJ_G0036725.1 mouse_genomes_project 8 93365720 93368120 + sense_intronic sense_intronic MGP_CBAJ_T0099583.1 MGP_CBAJ_G0037838.1 mouse_genomes_project 8 142026886 142026993 + Gm26002 snRNA snRNA MGP_CBAJ_T0089427.1 MGP_CBAJ_G0033584.1 mouse_genomes_project 8 96268018 96314109 + MGP_CBAJ_P0089427 Nod2 protein_coding protein_coding MGP_CBAJ_T0089428.1 MGP_CBAJ_G0033584.1 mouse_genomes_project 8 96268018 96314109 + MGP_CBAJ_P0089428 Nod2 protein_coding protein_coding MGP_CBAJ_T0089429.1 MGP_CBAJ_G0033584.1 mouse_genomes_project 8 96268087 96288025 + Nod2 protein_coding retained_intron MGP_CBAJ_T0089430.1 MGP_CBAJ_G0033584.1 mouse_genomes_project 8 96272093 96314109 + MGP_CBAJ_P0089430 Nod2 protein_coding protein_coding MGP_CBAJ_T0088782.1 MGP_CBAJ_G0033381.1 mouse_genomes_project 8 76189528 76200318 - MGP_CBAJ_P0088782 Ssbp4 protein_coding protein_coding MGP_CBAJ_T0089311.1 MGP_CBAJ_G0033551.1 mouse_genomes_project 8 92293564 92326672 + MGP_CBAJ_P0089311 Tnpo2 protein_coding protein_coding MGP_CBAJ_T0089312.1 MGP_CBAJ_G0033551.1 mouse_genomes_project 8 92293817 92326672 + MGP_CBAJ_P0089312 Tnpo2 protein_coding protein_coding MGP_CBAJ_T0089313.1 MGP_CBAJ_G0033551.1 mouse_genomes_project 8 92295040 92326676 + MGP_CBAJ_P0089313 Tnpo2 protein_coding unknown_likely_coding MGP_CBAJ_T0089024.1 MGP_CBAJ_G0033465.1 mouse_genomes_project 8 84006485 84041197 + MGP_CBAJ_P0089024 Prmt9 protein_coding protein_coding MGP_CBAJ_T0089025.1 MGP_CBAJ_G0033465.1 mouse_genomes_project 8 84006495 84023555 + Prmt9 protein_coding retained_intron MGP_CBAJ_T0089026.1 MGP_CBAJ_G0033465.1 mouse_genomes_project 8 84006498 84041197 + MGP_CBAJ_P0089026 Prmt9 protein_coding protein_coding MGP_CBAJ_T0089027.1 MGP_CBAJ_G0033465.1 mouse_genomes_project 8 84023238 84024670 + Prmt9 protein_coding retained_intron MGP_CBAJ_T0087942.1 MGP_CBAJ_G0033132.1 mouse_genomes_project 8 23344582 23641161 + MGP_CBAJ_P0087942 Zmat4 protein_coding protein_coding MGP_CBAJ_T0087943.1 MGP_CBAJ_G0033132.1 mouse_genomes_project 8 23384782 23828917 + MGP_CBAJ_P0087943 Zmat4 protein_coding protein_coding MGP_CBAJ_T0087944.1 MGP_CBAJ_G0033132.1 mouse_genomes_project 8 23384782 23934802 + MGP_CBAJ_P0087944 Zmat4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087945.1 MGP_CBAJ_G0033132.1 mouse_genomes_project 8 23425595 23537924 + MGP_CBAJ_P0087945 Zmat4 protein_coding protein_coding MGP_CBAJ_T0087946.1 MGP_CBAJ_G0033132.1 mouse_genomes_project 8 23676625 23774384 + Zmat4 protein_coding retained_intron MGP_CBAJ_T0090530.1 MGP_CBAJ_G0033950.1 mouse_genomes_project 8 139464917 139467895 + MGP_CBAJ_P0090530 protein_coding protein_coding MGP_CBAJ_T0089490.1 MGP_CBAJ_G0033606.1 mouse_genomes_project 8 101348618 101372050 - MGP_CBAJ_P0089490 Ces1f protein_coding protein_coding MGP_CBAJ_T0089491.1 MGP_CBAJ_G0033606.1 mouse_genomes_project 8 101348970 101351122 - Ces1f protein_coding retained_intron MGP_CBAJ_T0089492.1 MGP_CBAJ_G0033606.1 mouse_genomes_project 8 101357741 101359633 - Ces1f protein_coding retained_intron MGP_CBAJ_T0089493.1 MGP_CBAJ_G0033606.1 mouse_genomes_project 8 101358193 101359760 - Ces1f protein_coding retained_intron MGP_CBAJ_T0089494.1 MGP_CBAJ_G0033606.1 mouse_genomes_project 8 101366276 101367699 - Ces1f protein_coding retained_intron MGP_CBAJ_T0089495.1 MGP_CBAJ_G0033606.1 mouse_genomes_project 8 101366585 101372030 - MGP_CBAJ_P0089495 Ces1f protein_coding nonsense_mediated_decay MGP_CBAJ_T0087813.1 MGP_CBAJ_G0033069.1 mouse_genomes_project 8 14310919 16112900 - MGP_CBAJ_P0087813 Csmd1 protein_coding protein_coding MGP_CBAJ_T0087814.1 MGP_CBAJ_G0033069.1 mouse_genomes_project 8 14310927 14400447 - Csmd1 protein_coding retained_intron MGP_CBAJ_T0087815.1 MGP_CBAJ_G0033069.1 mouse_genomes_project 8 14510357 16112900 - Csmd1 protein_coding processed_transcript MGP_CBAJ_T0087816.1 MGP_CBAJ_G0033069.1 mouse_genomes_project 8 14727851 16112900 - Csmd1 protein_coding retained_intron MGP_CBAJ_T0087817.1 MGP_CBAJ_G0033069.1 mouse_genomes_project 8 14801551 16113205 - Csmd1 protein_coding processed_transcript MGP_CBAJ_T0087818.1 MGP_CBAJ_G0033069.1 mouse_genomes_project 8 15779709 16113004 - Csmd1 protein_coding retained_intron MGP_CBAJ_T0087819.1 MGP_CBAJ_G0033069.1 mouse_genomes_project 8 15950097 16112996 - Csmd1 protein_coding processed_transcript MGP_CBAJ_T0015720.1 MGP_CBAJ_G0013832.1 mouse_genomes_project 8 12396726 12397333 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0089638.1 MGP_CBAJ_G0033654.1 mouse_genomes_project 8 104082008 104175516 - MGP_CBAJ_P0089638 Cnot1 protein_coding protein_coding MGP_CBAJ_T0089639.1 MGP_CBAJ_G0033654.1 mouse_genomes_project 8 104082008 104175516 - MGP_CBAJ_P0089639 Cnot1 protein_coding protein_coding MGP_CBAJ_T0015764.1 MGP_CBAJ_G0013876.1 mouse_genomes_project 8 88252026 88252999 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0087847.1 MGP_CBAJ_G0033085.1 mouse_genomes_project 8 18033276 18035470 + MGP_CBAJ_P0087847 Defb46 protein_coding protein_coding MGP_CBAJ_T0009016.1 MGP_CBAJ_G0007242.1 mouse_genomes_project 8 85946768 85959331 + Gm4890 lincRNA lincRNA MGP_CBAJ_T0090095.1 MGP_CBAJ_G0033823.1 mouse_genomes_project 8 128565053 128570893 - Cmc2 protein_coding retained_intron MGP_CBAJ_T0090096.1 MGP_CBAJ_G0033823.1 mouse_genomes_project 8 128565053 128599800 - MGP_CBAJ_P0090096 Cmc2 protein_coding protein_coding MGP_CBAJ_T0090097.1 MGP_CBAJ_G0033823.1 mouse_genomes_project 8 128565647 128599767 - MGP_CBAJ_P0090097 Cmc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090098.1 MGP_CBAJ_G0033823.1 mouse_genomes_project 8 128565901 128599784 - MGP_CBAJ_P0090098 Cmc2 protein_coding protein_coding MGP_CBAJ_T0090099.1 MGP_CBAJ_G0033823.1 mouse_genomes_project 8 128565983 128599791 - Cmc2 protein_coding processed_transcript MGP_CBAJ_T0090100.1 MGP_CBAJ_G0033823.1 mouse_genomes_project 8 128566000 128599710 - MGP_CBAJ_P0090100 Cmc2 protein_coding protein_coding MGP_CBAJ_T0015726.1 MGP_CBAJ_G0013838.1 mouse_genomes_project 8 18588145 18588736 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0088201.1 MGP_CBAJ_G0033221.1 mouse_genomes_project 8 42542409 42630964 - MGP_CBAJ_P0088201 Mtmr7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088202.1 MGP_CBAJ_G0033221.1 mouse_genomes_project 8 42542415 42630951 - MGP_CBAJ_P0088202 Mtmr7 protein_coding protein_coding MGP_CBAJ_T0088203.1 MGP_CBAJ_G0033221.1 mouse_genomes_project 8 42545193 42583239 - MGP_CBAJ_P0088203 Mtmr7 protein_coding protein_coding MGP_CBAJ_T0088204.1 MGP_CBAJ_G0033221.1 mouse_genomes_project 8 42546000 42630967 - MGP_CBAJ_P0088204 Mtmr7 protein_coding protein_coding MGP_CBAJ_T0088205.1 MGP_CBAJ_G0033221.1 mouse_genomes_project 8 42557030 42630934 - MGP_CBAJ_P0088205 Mtmr7 protein_coding protein_coding MGP_CBAJ_T0088206.1 MGP_CBAJ_G0033221.1 mouse_genomes_project 8 42599592 42630972 - Mtmr7 protein_coding processed_transcript MGP_CBAJ_T0088801.1 MGP_CBAJ_G0033391.1 mouse_genomes_project 8 76404072 76406346 - MGP_CBAJ_P0088801 Mpv17l2 protein_coding protein_coding MGP_CBAJ_T0087840.1 MGP_CBAJ_G0033079.1 mouse_genomes_project 8 17910869 17913659 + MGP_CBAJ_P0087840 Defb34 protein_coding protein_coding MGP_CBAJ_T0088977.1 MGP_CBAJ_G0033447.1 mouse_genomes_project 8 78435476 78451382 - MGP_CBAJ_P0088977 Cherp protein_coding protein_coding MGP_CBAJ_T0099571.1 MGP_CBAJ_G0037826.1 mouse_genomes_project 8 117089503 117089613 - Gm22085 snRNA snRNA MGP_CBAJ_T0088102.1 MGP_CBAJ_G0033187.1 mouse_genomes_project 8 34369505 34400346 + MGP_CBAJ_P0088102 Purg protein_coding protein_coding MGP_CBAJ_T0088103.1 MGP_CBAJ_G0033187.1 mouse_genomes_project 8 34369505 34370712 + MGP_CBAJ_P0088103 Purg protein_coding protein_coding MGP_CBAJ_T0089359.1 MGP_CBAJ_G0033565.1 mouse_genomes_project 8 92854870 92872444 - MGP_CBAJ_P0089359 Dnaja2 protein_coding protein_coding MGP_CBAJ_T0088416.1 MGP_CBAJ_G0033282.1 mouse_genomes_project 8 58718134 58843911 + MGP_CBAJ_P0088416 Gpm6a protein_coding protein_coding MGP_CBAJ_T0088694.1 MGP_CBAJ_G0033364.1 mouse_genomes_project 8 75789437 75820620 + MGP_CBAJ_P0088694 Sugp2 protein_coding protein_coding MGP_CBAJ_T0088695.1 MGP_CBAJ_G0033364.1 mouse_genomes_project 8 75789499 75797564 + MGP_CBAJ_P0088695 Sugp2 protein_coding protein_coding MGP_CBAJ_T0088696.1 MGP_CBAJ_G0033364.1 mouse_genomes_project 8 75789505 75810015 + Sugp2 protein_coding retained_intron MGP_CBAJ_T0088697.1 MGP_CBAJ_G0033364.1 mouse_genomes_project 8 75791263 75797816 + MGP_CBAJ_P0088697 Sugp2 protein_coding protein_coding MGP_CBAJ_T0088698.1 MGP_CBAJ_G0033364.1 mouse_genomes_project 8 75798496 75813522 + Sugp2 protein_coding retained_intron MGP_CBAJ_T0088699.1 MGP_CBAJ_G0033364.1 mouse_genomes_project 8 75803376 75807116 + Sugp2 protein_coding retained_intron MGP_CBAJ_T0088700.1 MGP_CBAJ_G0033364.1 mouse_genomes_project 8 75807311 75835073 + Sugp2 protein_coding processed_transcript MGP_CBAJ_T0088701.1 MGP_CBAJ_G0033364.1 mouse_genomes_project 8 75812727 75814654 + Sugp2 protein_coding retained_intron MGP_CBAJ_T0088702.1 MGP_CBAJ_G0033364.1 mouse_genomes_project 8 75814999 75818353 + Sugp2 protein_coding processed_transcript MGP_CBAJ_T0088703.1 MGP_CBAJ_G0033364.1 mouse_genomes_project 8 75815689 75818353 + Sugp2 protein_coding retained_intron MGP_CBAJ_T0088704.1 MGP_CBAJ_G0033364.1 mouse_genomes_project 8 75828811 75835072 + Sugp2 protein_coding processed_transcript MGP_CBAJ_T0002297.1 MGP_CBAJ_G0002210.1 mouse_genomes_project 8 109081933 109083950 + TEC TEC MGP_CBAJ_T0010859.1 MGP_CBAJ_G0008997.1 mouse_genomes_project 8 91422841 91422930 - Mir181c miRNA miRNA MGP_CBAJ_T0005278.1 MGP_CBAJ_G0004467.1 mouse_genomes_project 8 62742528 62743561 + Gm15882 antisense antisense MGP_CBAJ_T0099564.1 MGP_CBAJ_G0037819.1 mouse_genomes_project 8 93681431 93681529 + Gm24490 snRNA snRNA MGP_CBAJ_T0097847.1 MGP_CBAJ_G0036120.1 mouse_genomes_project 8 103229397 103234475 - pseudogene pseudogene MGP_CBAJ_T0015785.1 MGP_CBAJ_G0013897.1 mouse_genomes_project 8 133000579 133001260 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100811.1 MGP_CBAJ_G0039066.1 mouse_genomes_project 8 70939095 70939230 + Gm26123 snoRNA snoRNA MGP_CBAJ_T0090104.1 MGP_CBAJ_G0033827.1 mouse_genomes_project 8 128660764 128676742 - MGP_CBAJ_P0090104 Gcsh protein_coding protein_coding MGP_CBAJ_T0090105.1 MGP_CBAJ_G0033827.1 mouse_genomes_project 8 128667046 128674573 - Gcsh protein_coding processed_transcript MGP_CBAJ_T0002303.1 MGP_CBAJ_G0002216.1 mouse_genomes_project 8 132773572 132774407 - TEC TEC MGP_CBAJ_T0089324.1 MGP_CBAJ_G0033554.1 mouse_genomes_project 8 92340552 92343822 + MGP_CBAJ_P0089324 Dhps protein_coding protein_coding MGP_CBAJ_T0089325.1 MGP_CBAJ_G0033554.1 mouse_genomes_project 8 92340591 92343816 + MGP_CBAJ_P0089325 Dhps protein_coding nonsense_mediated_decay MGP_CBAJ_T0089326.1 MGP_CBAJ_G0033554.1 mouse_genomes_project 8 92340601 92341605 + Dhps protein_coding retained_intron MGP_CBAJ_T0089327.1 MGP_CBAJ_G0033554.1 mouse_genomes_project 8 92341096 92342238 + Dhps protein_coding retained_intron MGP_CBAJ_T0089328.1 MGP_CBAJ_G0033554.1 mouse_genomes_project 8 92341714 92342670 + Dhps protein_coding retained_intron MGP_CBAJ_T0089329.1 MGP_CBAJ_G0033554.1 mouse_genomes_project 8 92341714 92343811 + Dhps protein_coding retained_intron MGP_CBAJ_T0089330.1 MGP_CBAJ_G0033554.1 mouse_genomes_project 8 92342237 92343108 + Dhps protein_coding retained_intron MGP_CBAJ_T0089331.1 MGP_CBAJ_G0033554.1 mouse_genomes_project 8 92343358 92343811 + Dhps protein_coding retained_intron MGP_CBAJ_T0002307.1 MGP_CBAJ_G0002220.1 mouse_genomes_project 8 136087187 136087840 - TEC TEC MGP_CBAJ_T0087635.1 MGP_CBAJ_G0033019.1 mouse_genomes_project 8 9226357 9375258 + MGP_CBAJ_P0087635 Col4a2 protein_coding protein_coding MGP_CBAJ_T0087636.1 MGP_CBAJ_G0033019.1 mouse_genomes_project 8 9320564 9338521 + MGP_CBAJ_P0087636 Col4a2 protein_coding protein_coding MGP_CBAJ_T0087637.1 MGP_CBAJ_G0033019.1 mouse_genomes_project 8 9367079 9369673 + Col4a2 protein_coding processed_transcript MGP_CBAJ_T0005308.1 MGP_CBAJ_G0004492.1 mouse_genomes_project 8 121478043 121479883 + Gm15895 antisense antisense MGP_CBAJ_T0011580.1 MGP_CBAJ_G0009718.1 mouse_genomes_project 8 753286 753599 - Gm23886 misc_RNA misc_RNA MGP_CBAJ_T0009008.1 MGP_CBAJ_G0007235.1 mouse_genomes_project 8 73580679 73589661 - lincRNA lincRNA MGP_CBAJ_T0018228.1 MGP_CBAJ_G0015464.1 mouse_genomes_project 8 104174883 104193907 + 4930513N10Rik processed_transcript processed_transcript MGP_CBAJ_T0018229.1 MGP_CBAJ_G0015464.1 mouse_genomes_project 8 104175026 104178255 + 4930513N10Rik processed_transcript processed_transcript MGP_CBAJ_T0018230.1 MGP_CBAJ_G0015464.1 mouse_genomes_project 8 104177086 104193876 + 4930513N10Rik processed_transcript processed_transcript MGP_CBAJ_T0089869.1 MGP_CBAJ_G0033748.1 mouse_genomes_project 8 116940756 116970803 + MGP_CBAJ_P0089869 Cirh1a protein_coding protein_coding MGP_CBAJ_T0089844.1 MGP_CBAJ_G0033738.1 mouse_genomes_project 8 116146158 116156497 - MGP_CBAJ_P0089844 Slc7a6os protein_coding protein_coding MGP_CBAJ_T0089688.1 MGP_CBAJ_G0033673.1 mouse_genomes_project 8 114259426 114268885 + MGP_CBAJ_P0089688 Car7 protein_coding protein_coding MGP_CBAJ_T0089689.1 MGP_CBAJ_G0033673.1 mouse_genomes_project 8 114266417 114267601 + Car7 protein_coding retained_intron MGP_CBAJ_T0010855.1 MGP_CBAJ_G0008993.1 mouse_genomes_project 8 91240430 91240567 + Mir8111 miRNA miRNA MGP_CBAJ_T0088994.1 MGP_CBAJ_G0033454.1 mouse_genomes_project 8 78745171 78750370 + MGP_CBAJ_P0088994 F2rl3 protein_coding protein_coding MGP_CBAJ_T0090473.1 MGP_CBAJ_G0033930.1 mouse_genomes_project 8 137421265 137465751 + MGP_CBAJ_P0090473 Capn9 protein_coding protein_coding MGP_CBAJ_T0090474.1 MGP_CBAJ_G0033930.1 mouse_genomes_project 8 137421267 137438502 + MGP_CBAJ_P0090474 Capn9 protein_coding protein_coding MGP_CBAJ_T0090475.1 MGP_CBAJ_G0033930.1 mouse_genomes_project 8 137459793 137461662 + Capn9 protein_coding processed_transcript MGP_CBAJ_T0098104.1 MGP_CBAJ_G0036377.1 mouse_genomes_project 8 50821219 50821332 + n-R5s97 rRNA rRNA MGP_CBAJ_T0015715.1 MGP_CBAJ_G0013827.1 mouse_genomes_project 8 4420363 4421202 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0087983.1 MGP_CBAJ_G0033143.1 mouse_genomes_project 8 24885864 24901413 - MGP_CBAJ_P0087983 Htra4 protein_coding protein_coding MGP_CBAJ_T0087984.1 MGP_CBAJ_G0033143.1 mouse_genomes_project 8 24890069 24899781 - Htra4 protein_coding retained_intron MGP_CBAJ_T0089653.1 MGP_CBAJ_G0033659.1 mouse_genomes_project 8 112045573 112061090 - MGP_CBAJ_P0089653 protein_coding protein_coding MGP_CBAJ_T0089654.1 MGP_CBAJ_G0033659.1 mouse_genomes_project 8 112048156 112060951 - protein_coding retained_intron MGP_CBAJ_T0089655.1 MGP_CBAJ_G0033659.1 mouse_genomes_project 8 112054781 112061090 - protein_coding retained_intron MGP_CBAJ_T0088907.1 MGP_CBAJ_G0033426.1 mouse_genomes_project 8 77424914 77476272 - MGP_CBAJ_P0088907 Unc13a protein_coding protein_coding MGP_CBAJ_T0088908.1 MGP_CBAJ_G0033426.1 mouse_genomes_project 8 77429569 77476251 - MGP_CBAJ_P0088908 Unc13a protein_coding protein_coding MGP_CBAJ_T0088909.1 MGP_CBAJ_G0033426.1 mouse_genomes_project 8 77435283 77443449 - MGP_CBAJ_P0088909 Unc13a protein_coding nonsense_mediated_decay MGP_CBAJ_T0088910.1 MGP_CBAJ_G0033426.1 mouse_genomes_project 8 77435548 77444620 - Unc13a protein_coding retained_intron MGP_CBAJ_T0088911.1 MGP_CBAJ_G0033426.1 mouse_genomes_project 8 77443511 77447981 - MGP_CBAJ_P0088911 Unc13a protein_coding protein_coding MGP_CBAJ_T0088912.1 MGP_CBAJ_G0033426.1 mouse_genomes_project 8 77445049 77476162 - MGP_CBAJ_P0088912 Unc13a protein_coding unknown_likely_coding MGP_CBAJ_T0088913.1 MGP_CBAJ_G0033426.1 mouse_genomes_project 8 77455653 77460539 - MGP_CBAJ_P0088913 Unc13a protein_coding protein_coding MGP_CBAJ_T0088914.1 MGP_CBAJ_G0033426.1 mouse_genomes_project 8 77462407 77476256 - Unc13a protein_coding retained_intron MGP_CBAJ_T0088915.1 MGP_CBAJ_G0033426.1 mouse_genomes_project 8 77462412 77472601 - Unc13a protein_coding retained_intron MGP_CBAJ_T0099555.1 MGP_CBAJ_G0037810.1 mouse_genomes_project 8 72428778 72428902 - Gm24274 snRNA snRNA MGP_CBAJ_T0088074.1 MGP_CBAJ_G0033170.1 mouse_genomes_project 8 27445833 27449646 - MGP_CBAJ_P0088074 Adrb3 protein_coding protein_coding MGP_CBAJ_T0088075.1 MGP_CBAJ_G0033170.1 mouse_genomes_project 8 27446058 27448641 - MGP_CBAJ_P0088075 Adrb3 protein_coding protein_coding MGP_CBAJ_T0088076.1 MGP_CBAJ_G0033170.1 mouse_genomes_project 8 27446856 27448552 - MGP_CBAJ_P0088076 Adrb3 protein_coding protein_coding MGP_CBAJ_T0088180.1 MGP_CBAJ_G0033217.1 mouse_genomes_project 8 42287301 42365630 + MGP_CBAJ_P0088180 Micu3 protein_coding protein_coding MGP_CBAJ_T0088181.1 MGP_CBAJ_G0033217.1 mouse_genomes_project 8 42288001 42367279 + MGP_CBAJ_P0088181 Micu3 protein_coding protein_coding MGP_CBAJ_T0088182.1 MGP_CBAJ_G0033217.1 mouse_genomes_project 8 42343061 42356571 + Micu3 protein_coding retained_intron MGP_CBAJ_T0087766.1 MGP_CBAJ_G0033054.1 mouse_genomes_project 8 12022254 12035532 + MGP_CBAJ_P0087766 Upf3a protein_coding protein_coding MGP_CBAJ_T0088803.1 MGP_CBAJ_G0033393.1 mouse_genomes_project 8 76413608 76422164 - MGP_CBAJ_P0088803 Pik3r2 protein_coding protein_coding MGP_CBAJ_T0088804.1 MGP_CBAJ_G0033393.1 mouse_genomes_project 8 76413893 76414821 - MGP_CBAJ_P0088804 Pik3r2 protein_coding protein_coding MGP_CBAJ_T0088805.1 MGP_CBAJ_G0033393.1 mouse_genomes_project 8 76414072 76415097 - Pik3r2 protein_coding retained_intron MGP_CBAJ_T0088806.1 MGP_CBAJ_G0033393.1 mouse_genomes_project 8 76417425 76418601 - Pik3r2 protein_coding retained_intron MGP_CBAJ_T0088807.1 MGP_CBAJ_G0033393.1 mouse_genomes_project 8 76417805 76420138 - MGP_CBAJ_P0088807 Pik3r2 protein_coding protein_coding MGP_CBAJ_T0088808.1 MGP_CBAJ_G0033393.1 mouse_genomes_project 8 76420459 76422130 - Pik3r2 protein_coding processed_transcript MGP_CBAJ_T0015755.1 MGP_CBAJ_G0013867.1 mouse_genomes_project 8 81436624 81437465 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0088528.1 MGP_CBAJ_G0033316.1 mouse_genomes_project 8 70603178 71599188 + protein_coding processed_transcript MGP_CBAJ_T0088529.1 MGP_CBAJ_G0033316.1 mouse_genomes_project 8 70603287 71598599 + MGP_CBAJ_P0088529 protein_coding protein_coding MGP_CBAJ_T0088530.1 MGP_CBAJ_G0033316.1 mouse_genomes_project 8 70603303 71598941 + MGP_CBAJ_P0088530 protein_coding protein_coding MGP_CBAJ_T0088531.1 MGP_CBAJ_G0033316.1 mouse_genomes_project 8 70603315 71013684 + protein_coding retained_intron MGP_CBAJ_T0088532.1 MGP_CBAJ_G0033316.1 mouse_genomes_project 8 70603364 71600868 + MGP_CBAJ_P0088532 protein_coding protein_coding MGP_CBAJ_T0088533.1 MGP_CBAJ_G0033316.1 mouse_genomes_project 8 70603803 71599658 + MGP_CBAJ_P0088533 protein_coding protein_coding MGP_CBAJ_T0088534.1 MGP_CBAJ_G0033316.1 mouse_genomes_project 8 71012512 71600856 + MGP_CBAJ_P0088534 protein_coding protein_coding MGP_CBAJ_T0088535.1 MGP_CBAJ_G0033316.1 mouse_genomes_project 8 71205768 71600856 + MGP_CBAJ_P0088535 protein_coding protein_coding MGP_CBAJ_T0088536.1 MGP_CBAJ_G0033316.1 mouse_genomes_project 8 71205768 71600856 + MGP_CBAJ_P0088536 protein_coding protein_coding MGP_CBAJ_T0088537.1 MGP_CBAJ_G0033316.1 mouse_genomes_project 8 71506756 71599652 + MGP_CBAJ_P0088537 protein_coding protein_coding MGP_CBAJ_T0088538.1 MGP_CBAJ_G0033316.1 mouse_genomes_project 8 71506763 71599662 + MGP_CBAJ_P0088538 protein_coding protein_coding MGP_CBAJ_T0090246.1 MGP_CBAJ_G0033868.1 mouse_genomes_project 8 133474961 133477753 + MGP_CBAJ_P0090246 Foxl1 protein_coding protein_coding MGP_CBAJ_T0089120.1 MGP_CBAJ_G0033502.1 mouse_genomes_project 8 90879895 90921376 - MGP_CBAJ_P0089120 Pkn1 protein_coding protein_coding MGP_CBAJ_T0089121.1 MGP_CBAJ_G0033502.1 mouse_genomes_project 8 90880224 90916268 - MGP_CBAJ_P0089121 Pkn1 protein_coding protein_coding MGP_CBAJ_T0089122.1 MGP_CBAJ_G0033502.1 mouse_genomes_project 8 90880232 90921294 - MGP_CBAJ_P0089122 Pkn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089123.1 MGP_CBAJ_G0033502.1 mouse_genomes_project 8 90880260 90889834 - Pkn1 protein_coding retained_intron MGP_CBAJ_T0089124.1 MGP_CBAJ_G0033502.1 mouse_genomes_project 8 90880720 90881914 - Pkn1 protein_coding processed_transcript MGP_CBAJ_T0089125.1 MGP_CBAJ_G0033502.1 mouse_genomes_project 8 90883160 90883727 - Pkn1 protein_coding retained_intron MGP_CBAJ_T0089126.1 MGP_CBAJ_G0033502.1 mouse_genomes_project 8 90883613 90892074 - Pkn1 protein_coding processed_transcript MGP_CBAJ_T0089127.1 MGP_CBAJ_G0033502.1 mouse_genomes_project 8 90892022 90895873 - Pkn1 protein_coding retained_intron MGP_CBAJ_T0089128.1 MGP_CBAJ_G0033502.1 mouse_genomes_project 8 90912123 90921364 - Pkn1 protein_coding retained_intron MGP_CBAJ_T0005315.1 MGP_CBAJ_G0004499.1 mouse_genomes_project 8 128726254 128733393 + Gm15395 antisense antisense MGP_CBAJ_T0009083.1 MGP_CBAJ_G0007288.1 mouse_genomes_project 8 133178823 133181099 + Gm26878 lincRNA lincRNA MGP_CBAJ_T0088615.1 MGP_CBAJ_G0033343.1 mouse_genomes_project 8 75322444 75339184 + MGP_CBAJ_P0088615 Atp13a1 protein_coding protein_coding MGP_CBAJ_T0009079.1 MGP_CBAJ_G0007284.1 mouse_genomes_project 8 132380651 132411752 - A330074K22Rik lincRNA lincRNA MGP_CBAJ_T0010851.1 MGP_CBAJ_G0008989.1 mouse_genomes_project 8 77431562 77431622 - Mir6769b miRNA miRNA MGP_CBAJ_T0089229.1 MGP_CBAJ_G0033529.1 mouse_genomes_project 8 91947776 91956088 - Nfix protein_coding processed_transcript MGP_CBAJ_T0089231.1 MGP_CBAJ_G0033529.1 mouse_genomes_project 8 91952672 91955586 - Nfix protein_coding processed_transcript MGP_CBAJ_T0089232.1 MGP_CBAJ_G0033529.1 mouse_genomes_project 8 91952673 92021220 - MGP_CBAJ_P0089232 Nfix protein_coding protein_coding MGP_CBAJ_T0089233.1 MGP_CBAJ_G0033529.1 mouse_genomes_project 8 91956483 92047227 - MGP_CBAJ_P0089233 Nfix protein_coding protein_coding MGP_CBAJ_T0089234.1 MGP_CBAJ_G0033529.1 mouse_genomes_project 8 91956504 91961946 - Nfix protein_coding retained_intron MGP_CBAJ_T0089235.1 MGP_CBAJ_G0033529.1 mouse_genomes_project 8 91961672 92047131 - MGP_CBAJ_P0089235 Nfix protein_coding protein_coding MGP_CBAJ_T0088257.1 MGP_CBAJ_G0033241.1 mouse_genomes_project 8 47841853 47884239 - MGP_CBAJ_P0088257 Cyp4v3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088258.1 MGP_CBAJ_G0033241.1 mouse_genomes_project 8 47880718 47920278 - MGP_CBAJ_P0088258 Cyp4v3 protein_coding protein_coding MGP_CBAJ_T0005270.1 MGP_CBAJ_G0004460.1 mouse_genomes_project 8 43110506 43122391 + Gm16193 antisense antisense MGP_CBAJ_T0087489.1 MGP_CBAJ_G0032973.1 mouse_genomes_project 8 426222 447753 + MGP_CBAJ_P0087489 1700019B03Rik protein_coding protein_coding MGP_CBAJ_T0087490.1 MGP_CBAJ_G0032973.1 mouse_genomes_project 8 426222 447753 + MGP_CBAJ_P0087490 1700019B03Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0087491.1 MGP_CBAJ_G0032973.1 mouse_genomes_project 8 435757 447756 + MGP_CBAJ_P0087491 1700019B03Rik protein_coding protein_coding MGP_CBAJ_T0087638.1 MGP_CBAJ_G0033020.1 mouse_genomes_project 8 9379554 9411232 - MGP_CBAJ_P0087638 Rab20 protein_coding protein_coding MGP_CBAJ_T0087788.1 MGP_CBAJ_G0033063.1 mouse_genomes_project 8 13063402 13065505 - MGP_CBAJ_P0087788 protein_coding protein_coding MGP_CBAJ_T0089198.1 MGP_CBAJ_G0033527.1 mouse_genomes_project 8 91917685 91921920 - MGP_CBAJ_P0089198 Nacc1 protein_coding protein_coding MGP_CBAJ_T0090532.1 MGP_CBAJ_G0033952.1 mouse_genomes_project 8 139562294 139611667 - MGP_CBAJ_P0090532 Tarbp1 protein_coding protein_coding MGP_CBAJ_T0010826.1 MGP_CBAJ_G0008964.1 mouse_genomes_project 8 11273818 11273879 + Mir7065 miRNA miRNA MGP_CBAJ_T0005316.1 MGP_CBAJ_G0004500.1 mouse_genomes_project 8 132172710 132181907 - Gm15684 antisense antisense MGP_CBAJ_T0087899.1 MGP_CBAJ_G0033122.1 mouse_genomes_project 8 22243208 22295433 - MGP_CBAJ_P0087899 Ikbkb protein_coding protein_coding MGP_CBAJ_T0087900.1 MGP_CBAJ_G0033122.1 mouse_genomes_project 8 22243209 22295395 - MGP_CBAJ_P0087900 Ikbkb protein_coding nonsense_mediated_decay MGP_CBAJ_T0087901.1 MGP_CBAJ_G0033122.1 mouse_genomes_project 8 22243209 22295389 - MGP_CBAJ_P0087901 Ikbkb protein_coding nonsense_mediated_decay MGP_CBAJ_T0087902.1 MGP_CBAJ_G0033122.1 mouse_genomes_project 8 22243764 22295444 - MGP_CBAJ_P0087902 Ikbkb protein_coding protein_coding MGP_CBAJ_T0087903.1 MGP_CBAJ_G0033122.1 mouse_genomes_project 8 22244104 22245479 - MGP_CBAJ_P0087903 Ikbkb protein_coding protein_coding MGP_CBAJ_T0087904.1 MGP_CBAJ_G0033122.1 mouse_genomes_project 8 22244353 22295433 - Ikbkb protein_coding retained_intron MGP_CBAJ_T0087905.1 MGP_CBAJ_G0033122.1 mouse_genomes_project 8 22252007 22253023 - Ikbkb protein_coding retained_intron MGP_CBAJ_T0087906.1 MGP_CBAJ_G0033122.1 mouse_genomes_project 8 22259980 22295395 - Ikbkb protein_coding retained_intron MGP_CBAJ_T0087907.1 MGP_CBAJ_G0033122.1 mouse_genomes_project 8 22265210 22295394 - Ikbkb protein_coding retained_intron MGP_CBAJ_T0087908.1 MGP_CBAJ_G0033122.1 mouse_genomes_project 8 22266755 22280707 - MGP_CBAJ_P0087908 Ikbkb protein_coding protein_coding MGP_CBAJ_T0087909.1 MGP_CBAJ_G0033122.1 mouse_genomes_project 8 22275772 22295414 - Ikbkb protein_coding retained_intron MGP_CBAJ_T0087910.1 MGP_CBAJ_G0033122.1 mouse_genomes_project 8 22278481 22295429 - Ikbkb protein_coding retained_intron MGP_CBAJ_T0087911.1 MGP_CBAJ_G0033122.1 mouse_genomes_project 8 22290835 22295418 - Ikbkb protein_coding retained_intron MGP_CBAJ_T0087912.1 MGP_CBAJ_G0033122.1 mouse_genomes_project 8 22291310 22295380 - Ikbkb protein_coding processed_transcript MGP_CBAJ_T0089652.1 MGP_CBAJ_G0033658.1 mouse_genomes_project 8 112012211 112202003 - MGP_CBAJ_P0089652 Cdh11 protein_coding protein_coding MGP_CBAJ_T0088688.1 MGP_CBAJ_G0033363.1 mouse_genomes_project 8 75776471 75789350 - MGP_CBAJ_P0088688 Armc6 protein_coding protein_coding MGP_CBAJ_T0088689.1 MGP_CBAJ_G0033363.1 mouse_genomes_project 8 75776497 75779111 - Armc6 protein_coding retained_intron MGP_CBAJ_T0088690.1 MGP_CBAJ_G0033363.1 mouse_genomes_project 8 75776776 75778583 - Armc6 protein_coding retained_intron MGP_CBAJ_T0088691.1 MGP_CBAJ_G0033363.1 mouse_genomes_project 8 75779507 75781499 - Armc6 protein_coding retained_intron MGP_CBAJ_T0088692.1 MGP_CBAJ_G0033363.1 mouse_genomes_project 8 75780931 75789333 - Armc6 protein_coding retained_intron MGP_CBAJ_T0088693.1 MGP_CBAJ_G0033363.1 mouse_genomes_project 8 75781639 75789004 - MGP_CBAJ_P0088693 Armc6 protein_coding protein_coding MGP_CBAJ_T0100820.1 MGP_CBAJ_G0039075.1 mouse_genomes_project 8 89460208 89460344 + Gm25138 snoRNA snoRNA MGP_CBAJ_T0090410.1 MGP_CBAJ_G0033908.1 mouse_genomes_project 8 135932039 135993107 - MGP_CBAJ_P0090410 Fanca protein_coding protein_coding MGP_CBAJ_T0090411.1 MGP_CBAJ_G0033908.1 mouse_genomes_project 8 135933029 135937963 - Fanca protein_coding processed_transcript MGP_CBAJ_T0090412.1 MGP_CBAJ_G0033908.1 mouse_genomes_project 8 135933543 135993084 - MGP_CBAJ_P0090412 Fanca protein_coding unknown_likely_coding MGP_CBAJ_T0090413.1 MGP_CBAJ_G0033908.1 mouse_genomes_project 8 135934944 135941354 - MGP_CBAJ_P0090413 Fanca protein_coding protein_coding MGP_CBAJ_T0090414.1 MGP_CBAJ_G0033908.1 mouse_genomes_project 8 135937897 135940338 - MGP_CBAJ_P0090414 Fanca protein_coding protein_coding MGP_CBAJ_T0090415.1 MGP_CBAJ_G0033908.1 mouse_genomes_project 8 135941201 135948921 - Fanca protein_coding retained_intron MGP_CBAJ_T0090416.1 MGP_CBAJ_G0033908.1 mouse_genomes_project 8 135953248 135993091 - Fanca protein_coding retained_intron MGP_CBAJ_T0090417.1 MGP_CBAJ_G0033908.1 mouse_genomes_project 8 135953467 135982338 - MGP_CBAJ_P0090417 Fanca protein_coding protein_coding MGP_CBAJ_T0090418.1 MGP_CBAJ_G0033908.1 mouse_genomes_project 8 135956425 135958904 - Fanca protein_coding retained_intron MGP_CBAJ_T0090419.1 MGP_CBAJ_G0033908.1 mouse_genomes_project 8 135969458 135993091 - MGP_CBAJ_P0090419 Fanca protein_coding protein_coding MGP_CBAJ_T0090420.1 MGP_CBAJ_G0033908.1 mouse_genomes_project 8 135981263 135993091 - Fanca protein_coding retained_intron MGP_CBAJ_T0090477.1 MGP_CBAJ_G0033932.1 mouse_genomes_project 8 137525524 137582038 - MGP_CBAJ_P0090477 Ttc13 protein_coding unknown_likely_coding MGP_CBAJ_T0090478.1 MGP_CBAJ_G0033932.1 mouse_genomes_project 8 137525534 137582059 - MGP_CBAJ_P0090478 Ttc13 protein_coding protein_coding MGP_CBAJ_T0090479.1 MGP_CBAJ_G0033932.1 mouse_genomes_project 8 137525534 137582040 - MGP_CBAJ_P0090479 Ttc13 protein_coding protein_coding MGP_CBAJ_T0090480.1 MGP_CBAJ_G0033932.1 mouse_genomes_project 8 137525534 137582048 - MGP_CBAJ_P0090480 Ttc13 protein_coding protein_coding MGP_CBAJ_T0090481.1 MGP_CBAJ_G0033932.1 mouse_genomes_project 8 137527647 137528420 - Ttc13 protein_coding retained_intron MGP_CBAJ_T0090482.1 MGP_CBAJ_G0033932.1 mouse_genomes_project 8 137528153 137529702 - Ttc13 protein_coding retained_intron MGP_CBAJ_T0090483.1 MGP_CBAJ_G0033932.1 mouse_genomes_project 8 137528299 137533156 - Ttc13 protein_coding retained_intron MGP_CBAJ_T0090484.1 MGP_CBAJ_G0033932.1 mouse_genomes_project 8 137533242 137536738 - Ttc13 protein_coding retained_intron MGP_CBAJ_T0090485.1 MGP_CBAJ_G0033932.1 mouse_genomes_project 8 137533748 137536330 - Ttc13 protein_coding retained_intron MGP_CBAJ_T0090486.1 MGP_CBAJ_G0033932.1 mouse_genomes_project 8 137568612 137582057 - Ttc13 protein_coding retained_intron MGP_CBAJ_T0009000.1 MGP_CBAJ_G0007228.1 mouse_genomes_project 8 60602310 60603648 + lincRNA lincRNA MGP_CBAJ_T0010900.1 MGP_CBAJ_G0009038.1 mouse_genomes_project 8 135183501 135183612 - Mir6396 miRNA miRNA MGP_CBAJ_T0089398.1 MGP_CBAJ_G0033577.1 mouse_genomes_project 8 95678533 95696978 + MGP_CBAJ_P0089398 Cnep1r1 protein_coding protein_coding MGP_CBAJ_T0089399.1 MGP_CBAJ_G0033577.1 mouse_genomes_project 8 95678542 95692726 + Cnep1r1 protein_coding processed_transcript MGP_CBAJ_T0089400.1 MGP_CBAJ_G0033577.1 mouse_genomes_project 8 95678551 95696982 + MGP_CBAJ_P0089400 Cnep1r1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089401.1 MGP_CBAJ_G0033577.1 mouse_genomes_project 8 95678564 95696352 + Cnep1r1 protein_coding retained_intron MGP_CBAJ_T0089402.1 MGP_CBAJ_G0033577.1 mouse_genomes_project 8 95678564 95693559 + MGP_CBAJ_P0089402 Cnep1r1 protein_coding protein_coding MGP_CBAJ_T0089403.1 MGP_CBAJ_G0033577.1 mouse_genomes_project 8 95678571 95692942 + MGP_CBAJ_P0089403 Cnep1r1 protein_coding protein_coding MGP_CBAJ_T0088484.1 MGP_CBAJ_G0033302.1 mouse_genomes_project 8 66083702 66534715 - MGP_CBAJ_P0088484 Palld protein_coding protein_coding MGP_CBAJ_T0088485.1 MGP_CBAJ_G0033302.1 mouse_genomes_project 8 66083708 66366355 - MGP_CBAJ_P0088485 Palld protein_coding protein_coding MGP_CBAJ_T0088486.1 MGP_CBAJ_G0033302.1 mouse_genomes_project 8 66083808 66177241 - MGP_CBAJ_P0088486 Palld protein_coding protein_coding MGP_CBAJ_T0088487.1 MGP_CBAJ_G0033302.1 mouse_genomes_project 8 66085369 66086345 - Palld protein_coding retained_intron MGP_CBAJ_T0088488.1 MGP_CBAJ_G0033302.1 mouse_genomes_project 8 66085465 66534736 - MGP_CBAJ_P0088488 Palld protein_coding protein_coding MGP_CBAJ_T0088489.1 MGP_CBAJ_G0033302.1 mouse_genomes_project 8 66086357 66170577 - MGP_CBAJ_P0088489 Palld protein_coding protein_coding MGP_CBAJ_T0088490.1 MGP_CBAJ_G0033302.1 mouse_genomes_project 8 66098380 66107111 - Palld protein_coding retained_intron MGP_CBAJ_T0088491.1 MGP_CBAJ_G0033302.1 mouse_genomes_project 8 66284141 66366364 - Palld protein_coding retained_intron MGP_CBAJ_T0088492.1 MGP_CBAJ_G0033302.1 mouse_genomes_project 8 66310616 66366355 - Palld protein_coding retained_intron MGP_CBAJ_T0010906.1 MGP_CBAJ_G0009044.1 mouse_genomes_project 8 141722948 141723028 + Mir1903 miRNA miRNA MGP_CBAJ_T0010845.1 MGP_CBAJ_G0008983.1 mouse_genomes_project 8 70056192 70056276 - Gm23419 miRNA miRNA MGP_CBAJ_T0089145.1 MGP_CBAJ_G0033508.1 mouse_genomes_project 8 91236287 91239579 + MGP_CBAJ_P0089145 1700067K01Rik protein_coding protein_coding MGP_CBAJ_T0089146.1 MGP_CBAJ_G0033508.1 mouse_genomes_project 8 91236489 91239478 + MGP_CBAJ_P0089146 1700067K01Rik protein_coding protein_coding MGP_CBAJ_T0089147.1 MGP_CBAJ_G0033508.1 mouse_genomes_project 8 91236489 91239472 + MGP_CBAJ_P0089147 1700067K01Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0089148.1 MGP_CBAJ_G0033508.1 mouse_genomes_project 8 91237130 91238091 + 1700067K01Rik protein_coding retained_intron MGP_CBAJ_T0089784.1 MGP_CBAJ_G0033712.1 mouse_genomes_project 8 115550434 115557804 + MGP_CBAJ_P0089784 Rltpr protein_coding unknown_likely_coding MGP_CBAJ_T0089785.1 MGP_CBAJ_G0033712.1 mouse_genomes_project 8 115555062 115562335 + MGP_CBAJ_P0089785 Rltpr protein_coding protein_coding MGP_CBAJ_T0089786.1 MGP_CBAJ_G0033712.1 mouse_genomes_project 8 115558304 115562360 + MGP_CBAJ_P0089786 Rltpr protein_coding unknown_likely_coding MGP_CBAJ_T0088890.1 MGP_CBAJ_G0033420.1 mouse_genomes_project 8 77354729 77359300 - MGP_CBAJ_P0088890 Tmem221 protein_coding protein_coding MGP_CBAJ_T0100804.1 MGP_CBAJ_G0039059.1 mouse_genomes_project 8 56556891 56557007 + Gm23666 snoRNA snoRNA MGP_CBAJ_T0089948.1 MGP_CBAJ_G0033775.1 mouse_genomes_project 8 120503391 120512758 + MGP_CBAJ_P0089948 Tat protein_coding protein_coding MGP_CBAJ_T0089949.1 MGP_CBAJ_G0033775.1 mouse_genomes_project 8 120503460 120507649 + MGP_CBAJ_P0089949 Tat protein_coding protein_coding MGP_CBAJ_T0088354.1 MGP_CBAJ_G0033261.1 mouse_genomes_project 8 50015531 50198476 - MGP_CBAJ_P0088354 Stox2 protein_coding protein_coding MGP_CBAJ_T0088355.1 MGP_CBAJ_G0033261.1 mouse_genomes_project 8 50015531 50133139 - MGP_CBAJ_P0088355 Stox2 protein_coding protein_coding MGP_CBAJ_T0010864.1 MGP_CBAJ_G0009002.1 mouse_genomes_project 8 92114473 92114535 + Mir7069 miRNA miRNA MGP_CBAJ_T0088545.1 MGP_CBAJ_G0033320.1 mouse_genomes_project 8 71838363 71849902 + MGP_CBAJ_P0088545 Npy1r protein_coding protein_coding MGP_CBAJ_T0008980.1 MGP_CBAJ_G0007212.1 mouse_genomes_project 8 27900070 27920134 + Gm1698 lincRNA lincRNA MGP_CBAJ_T0089870.1 MGP_CBAJ_G0033749.1 mouse_genomes_project 8 116998177 117094195 + MGP_CBAJ_P0089870 Sntb2 protein_coding protein_coding MGP_CBAJ_T0088030.1 MGP_CBAJ_G0033152.1 mouse_genomes_project 8 25770541 25791221 - MGP_CBAJ_P0088030 Bag4 protein_coding protein_coding MGP_CBAJ_T0087585.1 MGP_CBAJ_G0032998.1 mouse_genomes_project 8 1317014 1320132 + MGP_CBAJ_P0087585 Snapc2 protein_coding protein_coding MGP_CBAJ_T0088313.1 MGP_CBAJ_G0033251.1 mouse_genomes_project 8 48728251 48849098 - MGP_CBAJ_P0088313 Snx25 protein_coding protein_coding MGP_CBAJ_T0088314.1 MGP_CBAJ_G0033251.1 mouse_genomes_project 8 48728266 48816210 - Snx25 protein_coding retained_intron MGP_CBAJ_T0088315.1 MGP_CBAJ_G0033251.1 mouse_genomes_project 8 48728447 48778101 - MGP_CBAJ_P0088315 Snx25 protein_coding protein_coding MGP_CBAJ_T0088316.1 MGP_CBAJ_G0033251.1 mouse_genomes_project 8 48744397 48751446 - Snx25 protein_coding processed_transcript MGP_CBAJ_T0088317.1 MGP_CBAJ_G0033251.1 mouse_genomes_project 8 48751069 48823619 - MGP_CBAJ_P0088317 Snx25 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088318.1 MGP_CBAJ_G0033251.1 mouse_genomes_project 8 48751113 48787542 - Snx25 protein_coding processed_transcript MGP_CBAJ_T0088319.1 MGP_CBAJ_G0033251.1 mouse_genomes_project 8 48777658 48804954 - Snx25 protein_coding retained_intron MGP_CBAJ_T0088867.1 MGP_CBAJ_G0033414.1 mouse_genomes_project 8 77245892 77248948 + Dda1 protein_coding processed_transcript MGP_CBAJ_T0088868.1 MGP_CBAJ_G0033414.1 mouse_genomes_project 8 77245892 77252805 + Dda1 protein_coding processed_transcript MGP_CBAJ_T0088869.1 MGP_CBAJ_G0033414.1 mouse_genomes_project 8 77245892 77249077 + Dda1 protein_coding retained_intron MGP_CBAJ_T0088870.1 MGP_CBAJ_G0033414.1 mouse_genomes_project 8 77245892 77252805 + Dda1 protein_coding processed_transcript MGP_CBAJ_T0088871.1 MGP_CBAJ_G0033414.1 mouse_genomes_project 8 77245892 77252805 + MGP_CBAJ_P0088871 Dda1 protein_coding protein_coding MGP_CBAJ_T0088872.1 MGP_CBAJ_G0033414.1 mouse_genomes_project 8 77245892 77252805 + MGP_CBAJ_P0088872 Dda1 protein_coding protein_coding MGP_CBAJ_T0088873.1 MGP_CBAJ_G0033414.1 mouse_genomes_project 8 77245898 77252805 + MGP_CBAJ_P0088873 Dda1 protein_coding protein_coding MGP_CBAJ_T0088874.1 MGP_CBAJ_G0033414.1 mouse_genomes_project 8 77245904 77249484 + Dda1 protein_coding retained_intron MGP_CBAJ_T0088875.1 MGP_CBAJ_G0033414.1 mouse_genomes_project 8 77245904 77251681 + Dda1 protein_coding retained_intron MGP_CBAJ_T0088876.1 MGP_CBAJ_G0033414.1 mouse_genomes_project 8 77245978 77249317 + Dda1 protein_coding retained_intron MGP_CBAJ_T0088877.1 MGP_CBAJ_G0033414.1 mouse_genomes_project 8 77247103 77252805 + Dda1 protein_coding processed_transcript MGP_CBAJ_T0089516.1 MGP_CBAJ_G0033612.1 mouse_genomes_project 8 102183161 102201729 - MGP_CBAJ_P0089516 Nudt21 protein_coding protein_coding MGP_CBAJ_T0087773.1 MGP_CBAJ_G0033059.1 mouse_genomes_project 8 12192044 12217963 - MGP_CBAJ_P0087773 Tdrp protein_coding protein_coding MGP_CBAJ_T0087774.1 MGP_CBAJ_G0033059.1 mouse_genomes_project 8 12192165 12193423 - Tdrp protein_coding processed_transcript MGP_CBAJ_T0087775.1 MGP_CBAJ_G0033059.1 mouse_genomes_project 8 12193791 12202008 - Tdrp protein_coding processed_transcript MGP_CBAJ_T0087776.1 MGP_CBAJ_G0033059.1 mouse_genomes_project 8 12194148 12218218 - MGP_CBAJ_P0087776 Tdrp protein_coding protein_coding MGP_CBAJ_T0087777.1 MGP_CBAJ_G0033059.1 mouse_genomes_project 8 12215801 12217929 - Tdrp protein_coding retained_intron MGP_CBAJ_T0087848.1 MGP_CBAJ_G0033086.1 mouse_genomes_project 8 18117336 18119281 + MGP_CBAJ_P0087848 Defb3 protein_coding protein_coding MGP_CBAJ_T0088292.1 MGP_CBAJ_G0033246.1 mouse_genomes_project 8 48599160 48608667 + MGP_CBAJ_P0088292 Ccdc110 protein_coding protein_coding MGP_CBAJ_T0088293.1 MGP_CBAJ_G0033246.1 mouse_genomes_project 8 48599246 48606022 + MGP_CBAJ_P0088293 Ccdc110 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087868.1 MGP_CBAJ_G0033105.1 mouse_genomes_project 8 21464823 21470431 + MGP_CBAJ_P0087868 Fam90a1a protein_coding protein_coding MGP_CBAJ_T0090132.1 MGP_CBAJ_G0033839.1 mouse_genomes_project 8 131477706 131486700 + MGP_CBAJ_P0090132 Osgin1 protein_coding protein_coding MGP_CBAJ_T0090133.1 MGP_CBAJ_G0033839.1 mouse_genomes_project 8 131480704 131486639 + Osgin1 protein_coding processed_transcript MGP_CBAJ_T0090134.1 MGP_CBAJ_G0033839.1 mouse_genomes_project 8 131480749 131489878 + Osgin1 protein_coding retained_intron MGP_CBAJ_T0090135.1 MGP_CBAJ_G0033839.1 mouse_genomes_project 8 131480771 131488679 + Osgin1 protein_coding retained_intron MGP_CBAJ_T0090136.1 MGP_CBAJ_G0033839.1 mouse_genomes_project 8 131485058 131489527 + MGP_CBAJ_P0090136 Osgin1 protein_coding protein_coding MGP_CBAJ_T0089645.1 MGP_CBAJ_G0033657.1 mouse_genomes_project 8 107902616 108345527 - MGP_CBAJ_P0089645 Cdh8 protein_coding protein_coding MGP_CBAJ_T0089646.1 MGP_CBAJ_G0033657.1 mouse_genomes_project 8 107903028 108345527 - MGP_CBAJ_P0089646 Cdh8 protein_coding protein_coding MGP_CBAJ_T0089647.1 MGP_CBAJ_G0033657.1 mouse_genomes_project 8 107906920 108345539 - MGP_CBAJ_P0089647 Cdh8 protein_coding protein_coding MGP_CBAJ_T0089648.1 MGP_CBAJ_G0033657.1 mouse_genomes_project 8 107907111 108345571 - MGP_CBAJ_P0089648 Cdh8 protein_coding protein_coding MGP_CBAJ_T0089649.1 MGP_CBAJ_G0033657.1 mouse_genomes_project 8 107907111 108345419 - MGP_CBAJ_P0089649 Cdh8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089650.1 MGP_CBAJ_G0033657.1 mouse_genomes_project 8 108074535 108198314 - Cdh8 protein_coding retained_intron MGP_CBAJ_T0089651.1 MGP_CBAJ_G0033657.1 mouse_genomes_project 8 108129611 108345539 - MGP_CBAJ_P0089651 Cdh8 protein_coding protein_coding MGP_CBAJ_T0090130.1 MGP_CBAJ_G0033838.1 mouse_genomes_project 8 131437908 131454350 + MGP_CBAJ_P0090130 Mlycd protein_coding protein_coding MGP_CBAJ_T0090131.1 MGP_CBAJ_G0033838.1 mouse_genomes_project 8 131437928 131454335 + Mlycd protein_coding retained_intron MGP_CBAJ_T0088784.1 MGP_CBAJ_G0033383.1 mouse_genomes_project 8 76232407 76235111 - MGP_CBAJ_P0088784 Gdf15 protein_coding protein_coding MGP_CBAJ_T0088785.1 MGP_CBAJ_G0033383.1 mouse_genomes_project 8 76232408 76235472 - MGP_CBAJ_P0088785 Gdf15 protein_coding protein_coding MGP_CBAJ_T0090162.1 MGP_CBAJ_G0033852.1 mouse_genomes_project 8 131980643 131995769 + MGP_CBAJ_P0090162 Klhl36 protein_coding protein_coding MGP_CBAJ_T0098467.1 MGP_CBAJ_G0036728.1 mouse_genomes_project 8 134402012 134402679 - sense_intronic sense_intronic MGP_CBAJ_T0090157.1 MGP_CBAJ_G0033848.1 mouse_genomes_project 8 131744981 131774840 + MGP_CBAJ_P0090157 Wfdc1 protein_coding protein_coding MGP_CBAJ_T0008983.1 MGP_CBAJ_G0007214.1 mouse_genomes_project 8 31188276 31195309 + 4933433F19Rik lincRNA lincRNA MGP_CBAJ_T0089308.1 MGP_CBAJ_G0033548.1 mouse_genomes_project 8 92264152 92271060 - MGP_CBAJ_P0089308 Best2 protein_coding protein_coding MGP_CBAJ_T0090338.1 MGP_CBAJ_G0033890.1 mouse_genomes_project 8 135125634 135168327 - MGP_CBAJ_P0090338 Galns protein_coding protein_coding MGP_CBAJ_T0087866.1 MGP_CBAJ_G0033103.1 mouse_genomes_project 8 21442534 21442753 + MGP_CBAJ_P0087866 Defb35 protein_coding protein_coding MGP_CBAJ_T0011581.1 MGP_CBAJ_G0009719.1 mouse_genomes_project 8 1164316 1164569 - Gm23888 misc_RNA misc_RNA MGP_CBAJ_T0089594.1 MGP_CBAJ_G0033639.1 mouse_genomes_project 8 103337371 103360327 + MGP_CBAJ_P0089594 Drc7 protein_coding protein_coding MGP_CBAJ_T0089743.1 MGP_CBAJ_G0033699.1 mouse_genomes_project 8 115144158 115146862 + MGP_CBAJ_P0089743 Tmem208 protein_coding protein_coding MGP_CBAJ_T0089744.1 MGP_CBAJ_G0033699.1 mouse_genomes_project 8 115144166 115146860 + MGP_CBAJ_P0089744 Tmem208 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089745.1 MGP_CBAJ_G0033699.1 mouse_genomes_project 8 115144192 115146857 + MGP_CBAJ_P0089745 Tmem208 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089746.1 MGP_CBAJ_G0033699.1 mouse_genomes_project 8 115144199 115160451 + MGP_CBAJ_P0089746 Tmem208 protein_coding protein_coding MGP_CBAJ_T0089747.1 MGP_CBAJ_G0033699.1 mouse_genomes_project 8 115144259 115160033 + MGP_CBAJ_P0089747 Tmem208 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090498.1 MGP_CBAJ_G0033938.1 mouse_genomes_project 8 137770098 137777897 - MGP_CBAJ_P0090498 Exoc8 protein_coding protein_coding MGP_CBAJ_T0005283.1 MGP_CBAJ_G0004472.1 mouse_genomes_project 8 73282144 73303442 + Gm15991 antisense antisense MGP_CBAJ_T0087544.1 MGP_CBAJ_G0032988.1 mouse_genomes_project 8 767669 773256 - MGP_CBAJ_P0087544 Cd209a protein_coding protein_coding MGP_CBAJ_T0010897.1 MGP_CBAJ_G0009035.1 mouse_genomes_project 8 132775408 132775467 + Mir7687 miRNA miRNA MGP_CBAJ_T0088812.1 MGP_CBAJ_G0033397.1 mouse_genomes_project 8 76489511 76506281 - MGP_CBAJ_P0088812 Kcnn1 protein_coding protein_coding MGP_CBAJ_T0088813.1 MGP_CBAJ_G0033397.1 mouse_genomes_project 8 76489511 76506281 - MGP_CBAJ_P0088813 Kcnn1 protein_coding protein_coding MGP_CBAJ_T0088814.1 MGP_CBAJ_G0033397.1 mouse_genomes_project 8 76490634 76504664 - MGP_CBAJ_P0088814 Kcnn1 protein_coding unknown_likely_coding MGP_CBAJ_T0087624.1 MGP_CBAJ_G0033012.1 mouse_genomes_project 8 6856444 7491376 - MGP_CBAJ_P0087624 Fam155a protein_coding protein_coding MGP_CBAJ_T0088207.1 MGP_CBAJ_G0033222.1 mouse_genomes_project 8 42681587 42688607 + MGP_CBAJ_P0088207 Adam24 protein_coding protein_coding MGP_CBAJ_T0089079.1 MGP_CBAJ_G0033485.1 mouse_genomes_project 8 87874208 87912023 - MGP_CBAJ_P0089079 Usp38 protein_coding protein_coding MGP_CBAJ_T0005269.1 MGP_CBAJ_G0004459.1 mouse_genomes_project 8 43094921 43097206 + Gm16192 antisense antisense MGP_CBAJ_T0005317.1 MGP_CBAJ_G0004501.1 mouse_genomes_project 8 133965423 133966783 + Gm27045 antisense antisense MGP_CBAJ_T0088576.1 MGP_CBAJ_G0033329.1 mouse_genomes_project 8 74299185 74328712 + MGP_CBAJ_P0088576 Lpl protein_coding protein_coding MGP_CBAJ_T0088577.1 MGP_CBAJ_G0033329.1 mouse_genomes_project 8 74299249 74329225 + MGP_CBAJ_P0088577 Lpl protein_coding nonsense_mediated_decay MGP_CBAJ_T0088578.1 MGP_CBAJ_G0033329.1 mouse_genomes_project 8 74299351 74309406 + Lpl protein_coding retained_intron MGP_CBAJ_T0088579.1 MGP_CBAJ_G0033329.1 mouse_genomes_project 8 74310478 74315552 + Lpl protein_coding processed_transcript MGP_CBAJ_T0102228.1 MGP_CBAJ_G0040257.1 mouse_genomes_project 8 20196438 20197436 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0088240.1 MGP_CBAJ_G0033231.1 mouse_genomes_project 8 45485525 45496226 + MGP_CBAJ_P0088240 Triml2 protein_coding protein_coding MGP_CBAJ_T0089344.1 MGP_CBAJ_G0033558.1 mouse_genomes_project 8 92377206 92390121 - MGP_CBAJ_P0089344 Zfp791 protein_coding protein_coding MGP_CBAJ_T0090206.1 MGP_CBAJ_G0033860.1 mouse_genomes_project 8 132853703 132885141 - MGP_CBAJ_P0090206 1190005I06Rik protein_coding protein_coding MGP_CBAJ_T0090208.1 MGP_CBAJ_G0033860.1 mouse_genomes_project 8 132853902 132901250 - MGP_CBAJ_P0090208 1190005I06Rik protein_coding protein_coding MGP_CBAJ_T0090209.1 MGP_CBAJ_G0033860.1 mouse_genomes_project 8 132854036 132885012 - MGP_CBAJ_P0090209 1190005I06Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0087623.1 MGP_CBAJ_G0033011.1 mouse_genomes_project 8 6271800 6297581 - MGP_CBAJ_P0087623 Arglu1 protein_coding protein_coding MGP_CBAJ_T0089288.1 MGP_CBAJ_G0033544.1 mouse_genomes_project 8 92203025 92215923 - MGP_CBAJ_P0089288 Rnaseh2a protein_coding protein_coding MGP_CBAJ_T0089289.1 MGP_CBAJ_G0033544.1 mouse_genomes_project 8 92203025 92212253 - MGP_CBAJ_P0089289 Rnaseh2a protein_coding protein_coding MGP_CBAJ_T0089290.1 MGP_CBAJ_G0033544.1 mouse_genomes_project 8 92204112 92212283 - MGP_CBAJ_P0089290 Rnaseh2a protein_coding protein_coding MGP_CBAJ_T0089291.1 MGP_CBAJ_G0033544.1 mouse_genomes_project 8 92204112 92212306 - MGP_CBAJ_P0089291 Rnaseh2a protein_coding protein_coding MGP_CBAJ_T0089292.1 MGP_CBAJ_G0033544.1 mouse_genomes_project 8 92204112 92215624 - MGP_CBAJ_P0089292 Rnaseh2a protein_coding protein_coding MGP_CBAJ_T0089293.1 MGP_CBAJ_G0033544.1 mouse_genomes_project 8 92204123 92204561 - Rnaseh2a protein_coding retained_intron MGP_CBAJ_T0089294.1 MGP_CBAJ_G0033544.1 mouse_genomes_project 8 92204418 92212203 - Rnaseh2a protein_coding retained_intron MGP_CBAJ_T0089295.1 MGP_CBAJ_G0033544.1 mouse_genomes_project 8 92211848 92215950 - MGP_CBAJ_P0089295 Rnaseh2a protein_coding protein_coding MGP_CBAJ_T0089296.1 MGP_CBAJ_G0033544.1 mouse_genomes_project 8 92212193 92213119 - MGP_CBAJ_P0089296 Rnaseh2a protein_coding protein_coding MGP_CBAJ_T0089297.1 MGP_CBAJ_G0033544.1 mouse_genomes_project 8 92212470 92215765 - Rnaseh2a protein_coding processed_transcript MGP_CBAJ_T0100798.1 MGP_CBAJ_G0039053.1 mouse_genomes_project 8 44763453 44763517 - Gm23531 snoRNA snoRNA MGP_CBAJ_T0089257.1 MGP_CBAJ_G0033538.1 mouse_genomes_project 8 92118636 92134605 + MGP_CBAJ_P0089257 Syce2 protein_coding protein_coding MGP_CBAJ_T0089258.1 MGP_CBAJ_G0033538.1 mouse_genomes_project 8 92118636 92135370 + MGP_CBAJ_P0089258 Syce2 protein_coding protein_coding MGP_CBAJ_T0089259.1 MGP_CBAJ_G0033538.1 mouse_genomes_project 8 92118717 92134615 + MGP_CBAJ_P0089259 Syce2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089260.1 MGP_CBAJ_G0033538.1 mouse_genomes_project 8 92118962 92133140 + Syce2 protein_coding retained_intron MGP_CBAJ_T0089959.1 MGP_CBAJ_G0033783.1 mouse_genomes_project 8 121258642 121363092 + MGP_CBAJ_P0089959 Vac14 protein_coding protein_coding MGP_CBAJ_T0015777.1 MGP_CBAJ_G0013889.1 mouse_genomes_project 8 103903582 103905023 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0089323.1 MGP_CBAJ_G0033553.1 mouse_genomes_project 8 92336354 92336769 - MGP_CBAJ_P0089323 Gm5741 protein_coding protein_coding MGP_CBAJ_T0089859.1 MGP_CBAJ_G0033745.1 mouse_genomes_project 8 116681535 116892137 + MGP_CBAJ_P0089859 Tango6 protein_coding protein_coding MGP_CBAJ_T0089643.1 MGP_CBAJ_G0033656.1 mouse_genomes_project 8 104254715 104285906 - MGP_CBAJ_P0089643 Got2 protein_coding protein_coding MGP_CBAJ_T0089644.1 MGP_CBAJ_G0033656.1 mouse_genomes_project 8 104260543 104266773 - Got2 protein_coding processed_transcript MGP_CBAJ_T0089096.1 MGP_CBAJ_G0033491.1 mouse_genomes_project 8 90294989 90413449 + MGP_CBAJ_P0089096 Tbc1d9 protein_coding protein_coding MGP_CBAJ_T0089097.1 MGP_CBAJ_G0033491.1 mouse_genomes_project 8 90295497 90413962 + MGP_CBAJ_P0089097 Tbc1d9 protein_coding protein_coding MGP_CBAJ_T0089098.1 MGP_CBAJ_G0033491.1 mouse_genomes_project 8 90395679 90411976 + Tbc1d9 protein_coding retained_intron MGP_CBAJ_T0088956.1 MGP_CBAJ_G0033437.1 mouse_genomes_project 8 78049972 78059707 + Tpm4 protein_coding processed_transcript MGP_CBAJ_T0088957.1 MGP_CBAJ_G0033437.1 mouse_genomes_project 8 78050256 78070155 + MGP_CBAJ_P0088957 Tpm4 protein_coding protein_coding MGP_CBAJ_T0087605.1 MGP_CBAJ_G0033003.1 mouse_genomes_project 8 1579797 1610605 + MGP_CBAJ_P0087605 Cers4 protein_coding protein_coding MGP_CBAJ_T0087606.1 MGP_CBAJ_G0033003.1 mouse_genomes_project 8 1579911 1607666 + MGP_CBAJ_P0087606 Cers4 protein_coding protein_coding MGP_CBAJ_T0087607.1 MGP_CBAJ_G0033003.1 mouse_genomes_project 8 1579970 1623621 + MGP_CBAJ_P0087607 Cers4 protein_coding protein_coding MGP_CBAJ_T0087608.1 MGP_CBAJ_G0033003.1 mouse_genomes_project 8 1580173 1615633 + MGP_CBAJ_P0087608 Cers4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087609.1 MGP_CBAJ_G0033003.1 mouse_genomes_project 8 1580220 1617063 + Cers4 protein_coding retained_intron MGP_CBAJ_T0087610.1 MGP_CBAJ_G0033003.1 mouse_genomes_project 8 1580223 1616905 + MGP_CBAJ_P0087610 Cers4 protein_coding protein_coding MGP_CBAJ_T0087611.1 MGP_CBAJ_G0033003.1 mouse_genomes_project 8 1580229 1614408 + Cers4 protein_coding retained_intron MGP_CBAJ_T0087612.1 MGP_CBAJ_G0033003.1 mouse_genomes_project 8 1580253 1614499 + Cers4 protein_coding retained_intron MGP_CBAJ_T0087613.1 MGP_CBAJ_G0033003.1 mouse_genomes_project 8 1580292 1612474 + Cers4 protein_coding retained_intron MGP_CBAJ_T0089574.1 MGP_CBAJ_G0033632.1 mouse_genomes_project 8 103077090 103093411 + MGP_CBAJ_P0089574 Coq9 protein_coding protein_coding MGP_CBAJ_T0089575.1 MGP_CBAJ_G0033632.1 mouse_genomes_project 8 103077174 103089298 + Coq9 protein_coding retained_intron MGP_CBAJ_T0089576.1 MGP_CBAJ_G0033632.1 mouse_genomes_project 8 103077184 103081531 + Coq9 protein_coding retained_intron MGP_CBAJ_T0089577.1 MGP_CBAJ_G0033632.1 mouse_genomes_project 8 103077198 103091711 + Coq9 protein_coding retained_intron MGP_CBAJ_T0089578.1 MGP_CBAJ_G0033632.1 mouse_genomes_project 8 103077198 103091786 + MGP_CBAJ_P0089578 Coq9 protein_coding protein_coding MGP_CBAJ_T0089579.1 MGP_CBAJ_G0033632.1 mouse_genomes_project 8 103088704 103089498 + Coq9 protein_coding retained_intron MGP_CBAJ_T0089580.1 MGP_CBAJ_G0033632.1 mouse_genomes_project 8 103092030 103092853 + Coq9 protein_coding retained_intron MGP_CBAJ_T0100827.1 MGP_CBAJ_G0039082.1 mouse_genomes_project 8 104108523 104108659 - Gm26493 snoRNA snoRNA MGP_CBAJ_T0088246.1 MGP_CBAJ_G0033237.1 mouse_genomes_project 8 47468932 47587567 + MGP_CBAJ_P0088246 Fat1 protein_coding unknown_likely_coding MGP_CBAJ_T0088247.1 MGP_CBAJ_G0033237.1 mouse_genomes_project 8 47469176 47588415 + MGP_CBAJ_P0088247 Fat1 protein_coding protein_coding MGP_CBAJ_T0088248.1 MGP_CBAJ_G0033237.1 mouse_genomes_project 8 47483903 47588415 + MGP_CBAJ_P0088248 Fat1 protein_coding protein_coding MGP_CBAJ_T0088249.1 MGP_CBAJ_G0033237.1 mouse_genomes_project 8 47569524 47588403 + MGP_CBAJ_P0088249 Fat1 protein_coding protein_coding MGP_CBAJ_T0088250.1 MGP_CBAJ_G0033237.1 mouse_genomes_project 8 47580690 47586989 + MGP_CBAJ_P0088250 Fat1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088251.1 MGP_CBAJ_G0033237.1 mouse_genomes_project 8 47580690 47586989 + MGP_CBAJ_P0088251 Fat1 protein_coding protein_coding MGP_CBAJ_T0088252.1 MGP_CBAJ_G0033237.1 mouse_genomes_project 8 47581292 47586658 + Fat1 protein_coding retained_intron MGP_CBAJ_T0015789.1 MGP_CBAJ_G0013901.1 mouse_genomes_project 8 140826870 140827305 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0087836.1 MGP_CBAJ_G0033075.1 mouse_genomes_project 8 17756065 17760890 - MGP_CBAJ_P0087836 Defb37 protein_coding protein_coding MGP_CBAJ_T0089875.1 MGP_CBAJ_G0033752.1 mouse_genomes_project 8 117130916 117143978 - MGP_CBAJ_P0089875 Cog8 protein_coding protein_coding MGP_CBAJ_T0089876.1 MGP_CBAJ_G0033752.1 mouse_genomes_project 8 117130922 117143973 - MGP_CBAJ_P0089876 Cog8 protein_coding protein_coding MGP_CBAJ_T0089878.1 MGP_CBAJ_G0033752.1 mouse_genomes_project 8 117139970 117141550 - Cog8 protein_coding retained_intron MGP_CBAJ_T0089879.1 MGP_CBAJ_G0033752.1 mouse_genomes_project 8 117140200 117143787 - MGP_CBAJ_P0089879 Cog8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0015776.1 MGP_CBAJ_G0013888.1 mouse_genomes_project 8 103074487 103075286 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0087884.1 MGP_CBAJ_G0033112.1 mouse_genomes_project 8 21712727 21745405 + MGP_CBAJ_P0087884 Vps36 protein_coding protein_coding MGP_CBAJ_T0087885.1 MGP_CBAJ_G0033112.1 mouse_genomes_project 8 21712760 21728259 + Vps36 protein_coding processed_transcript MGP_CBAJ_T0087886.1 MGP_CBAJ_G0033112.1 mouse_genomes_project 8 21741554 21743194 + Vps36 protein_coding retained_intron MGP_CBAJ_T0089690.1 MGP_CBAJ_G0033674.1 mouse_genomes_project 8 114329688 114335069 + MGP_CBAJ_P0089690 Pdp2 protein_coding protein_coding MGP_CBAJ_T0015759.1 MGP_CBAJ_G0013871.1 mouse_genomes_project 8 86230493 86231468 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010866.1 MGP_CBAJ_G0009004.1 mouse_genomes_project 8 92330988 92331075 + Mir7070 miRNA miRNA MGP_CBAJ_T0089824.1 MGP_CBAJ_G0033732.1 mouse_genomes_project 8 115901218 115927693 + MGP_CBAJ_P0089824 Dus2 protein_coding protein_coding MGP_CBAJ_T0089826.1 MGP_CBAJ_G0033732.1 mouse_genomes_project 8 115923367 115979426 + MGP_CBAJ_P0089826 Dus2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089827.1 MGP_CBAJ_G0033732.1 mouse_genomes_project 8 115923367 115979405 + MGP_CBAJ_P0089827 Dus2 protein_coding protein_coding MGP_CBAJ_T0089828.1 MGP_CBAJ_G0033732.1 mouse_genomes_project 8 115923382 115947610 + Dus2 protein_coding retained_intron MGP_CBAJ_T0089829.1 MGP_CBAJ_G0033732.1 mouse_genomes_project 8 115953541 115969312 + Dus2 protein_coding retained_intron MGP_CBAJ_T0089830.1 MGP_CBAJ_G0033732.1 mouse_genomes_project 8 115974293 115977785 + Dus2 protein_coding retained_intron MGP_CBAJ_T0009098.1 MGP_CBAJ_G0007299.1 mouse_genomes_project 8 134790660 134793738 + Gm22 lincRNA lincRNA MGP_CBAJ_T0009099.1 MGP_CBAJ_G0007299.1 mouse_genomes_project 8 134790660 134793742 + Gm22 lincRNA lincRNA MGP_CBAJ_T0089778.1 MGP_CBAJ_G0033711.1 mouse_genomes_project 8 115496374 115545876 + Ctcf protein_coding processed_transcript MGP_CBAJ_T0089779.1 MGP_CBAJ_G0033711.1 mouse_genomes_project 8 115496385 115547151 + MGP_CBAJ_P0089779 Ctcf protein_coding protein_coding MGP_CBAJ_T0089780.1 MGP_CBAJ_G0033711.1 mouse_genomes_project 8 115496830 115528492 + Ctcf protein_coding processed_transcript MGP_CBAJ_T0089781.1 MGP_CBAJ_G0033711.1 mouse_genomes_project 8 115496961 115528209 + Ctcf protein_coding processed_transcript MGP_CBAJ_T0089782.1 MGP_CBAJ_G0033711.1 mouse_genomes_project 8 115540368 115544846 + Ctcf protein_coding retained_intron MGP_CBAJ_T0089783.1 MGP_CBAJ_G0033711.1 mouse_genomes_project 8 115540368 115543780 + Ctcf protein_coding processed_transcript MGP_CBAJ_T0088793.1 MGP_CBAJ_G0033389.1 mouse_genomes_project 8 76352917 76384183 + MGP_CBAJ_P0088793 Pde4c protein_coding protein_coding MGP_CBAJ_T0088794.1 MGP_CBAJ_G0033389.1 mouse_genomes_project 8 76353261 76393442 + MGP_CBAJ_P0088794 Pde4c protein_coding protein_coding MGP_CBAJ_T0088795.1 MGP_CBAJ_G0033389.1 mouse_genomes_project 8 76353262 76393429 + MGP_CBAJ_P0088795 Pde4c protein_coding protein_coding MGP_CBAJ_T0088796.1 MGP_CBAJ_G0033389.1 mouse_genomes_project 8 76362280 76384030 + Pde4c protein_coding processed_transcript MGP_CBAJ_T0088797.1 MGP_CBAJ_G0033389.1 mouse_genomes_project 8 76381215 76388601 + Pde4c protein_coding retained_intron MGP_CBAJ_T0088798.1 MGP_CBAJ_G0033389.1 mouse_genomes_project 8 76386019 76393071 + Pde4c protein_coding retained_intron MGP_CBAJ_T0090117.1 MGP_CBAJ_G0033833.1 mouse_genomes_project 8 129475495 129485613 - MGP_CBAJ_P0090117 Sdr42e1 protein_coding protein_coding MGP_CBAJ_T0090118.1 MGP_CBAJ_G0033833.1 mouse_genomes_project 8 129475498 129487755 - MGP_CBAJ_P0090118 Sdr42e1 protein_coding protein_coding MGP_CBAJ_T0090119.1 MGP_CBAJ_G0033833.1 mouse_genomes_project 8 129477429 129487755 - MGP_CBAJ_P0090119 Sdr42e1 protein_coding protein_coding MGP_CBAJ_T0088146.1 MGP_CBAJ_G0033201.1 mouse_genomes_project 8 35954316 35966867 + MGP_CBAJ_P0088146 Dusp4 protein_coding protein_coding MGP_CBAJ_T0005304.1 MGP_CBAJ_G0004489.1 mouse_genomes_project 8 119261946 119268094 - antisense antisense MGP_CBAJ_T0089011.1 MGP_CBAJ_G0033461.1 mouse_genomes_project 8 81363679 81373896 + MGP_CBAJ_P0089011 Rasd2 protein_coding protein_coding MGP_CBAJ_T0089012.1 MGP_CBAJ_G0033461.1 mouse_genomes_project 8 81364237 81372218 + MGP_CBAJ_P0089012 Rasd2 protein_coding protein_coding MGP_CBAJ_T0090207.1 MGP_CBAJ_G0033861.1 mouse_genomes_project 8 132853887 132921924 - MGP_CBAJ_P0090207 Gm27021 protein_coding protein_coding MGP_CBAJ_T0087677.1 MGP_CBAJ_G0033033.1 mouse_genomes_project 8 10874028 10990332 + MGP_CBAJ_P0087677 Atp11a protein_coding protein_coding MGP_CBAJ_T0087678.1 MGP_CBAJ_G0033033.1 mouse_genomes_project 8 10874030 10990332 + MGP_CBAJ_P0087678 Atp11a protein_coding protein_coding MGP_CBAJ_T0087679.1 MGP_CBAJ_G0033033.1 mouse_genomes_project 8 10874083 10981324 + MGP_CBAJ_P0087679 Atp11a protein_coding nonsense_mediated_decay MGP_CBAJ_T0087680.1 MGP_CBAJ_G0033033.1 mouse_genomes_project 8 10930090 10933058 + Atp11a protein_coding retained_intron MGP_CBAJ_T0087681.1 MGP_CBAJ_G0033033.1 mouse_genomes_project 8 10941074 10947212 + Atp11a protein_coding retained_intron MGP_CBAJ_T0087682.1 MGP_CBAJ_G0033033.1 mouse_genomes_project 8 10953836 10990271 + MGP_CBAJ_P0087682 Atp11a protein_coding protein_coding MGP_CBAJ_T0087683.1 MGP_CBAJ_G0033033.1 mouse_genomes_project 8 10966526 10978874 + MGP_CBAJ_P0087683 Atp11a protein_coding protein_coding MGP_CBAJ_T0087684.1 MGP_CBAJ_G0033033.1 mouse_genomes_project 8 10968512 10970396 + Atp11a protein_coding processed_transcript MGP_CBAJ_T0087685.1 MGP_CBAJ_G0033033.1 mouse_genomes_project 8 10978563 10983809 + MGP_CBAJ_P0087685 Atp11a protein_coding protein_coding MGP_CBAJ_T0087686.1 MGP_CBAJ_G0033033.1 mouse_genomes_project 8 10979565 10983806 + MGP_CBAJ_P0087686 Atp11a protein_coding protein_coding MGP_CBAJ_T0087687.1 MGP_CBAJ_G0033033.1 mouse_genomes_project 8 10983168 10987174 + Atp11a protein_coding retained_intron MGP_CBAJ_T0088995.1 MGP_CBAJ_G0033455.1 mouse_genomes_project 8 78816431 79394901 - MGP_CBAJ_P0088995 Large protein_coding protein_coding MGP_CBAJ_T0088996.1 MGP_CBAJ_G0033455.1 mouse_genomes_project 8 78816431 79393917 - MGP_CBAJ_P0088996 Large protein_coding protein_coding MGP_CBAJ_T0088997.1 MGP_CBAJ_G0033455.1 mouse_genomes_project 8 79045039 79112283 - Large protein_coding retained_intron MGP_CBAJ_T0087953.1 MGP_CBAJ_G0033136.1 mouse_genomes_project 8 24416683 24428133 - MGP_CBAJ_P0087953 Ido1 protein_coding protein_coding MGP_CBAJ_T0087954.1 MGP_CBAJ_G0033136.1 mouse_genomes_project 8 24416683 24429476 - MGP_CBAJ_P0087954 Ido1 protein_coding protein_coding MGP_CBAJ_T0005243.1 MGP_CBAJ_G0004441.1 mouse_genomes_project 8 729276 763319 + Gm16553 antisense antisense MGP_CBAJ_T0090094.1 MGP_CBAJ_G0033822.1 mouse_genomes_project 8 128162747 128357117 - MGP_CBAJ_P0090094 Cdyl2 protein_coding protein_coding MGP_CBAJ_T0008971.1 MGP_CBAJ_G0007206.1 mouse_genomes_project 8 11348604 11355374 + 2810030D12Rik lincRNA lincRNA MGP_CBAJ_T0008972.1 MGP_CBAJ_G0007206.1 mouse_genomes_project 8 11348612 11355386 + 2810030D12Rik lincRNA lincRNA MGP_CBAJ_T0008973.1 MGP_CBAJ_G0007206.1 mouse_genomes_project 8 11348636 11349675 + 2810030D12Rik lincRNA lincRNA MGP_CBAJ_T0008974.1 MGP_CBAJ_G0007206.1 mouse_genomes_project 8 11348704 11355379 + 2810030D12Rik lincRNA lincRNA MGP_CBAJ_T0089984.1 MGP_CBAJ_G0033788.1 mouse_genomes_project 8 121561153 121584238 - MGP_CBAJ_P0089984 Fuk protein_coding protein_coding MGP_CBAJ_T0088066.1 MGP_CBAJ_G0033166.1 mouse_genomes_project 8 27286378 27327984 + MGP_CBAJ_P0088066 Adgra2 protein_coding protein_coding MGP_CBAJ_T0088067.1 MGP_CBAJ_G0033166.1 mouse_genomes_project 8 27286393 27327985 + MGP_CBAJ_P0088067 Adgra2 protein_coding protein_coding MGP_CBAJ_T0088068.1 MGP_CBAJ_G0033166.1 mouse_genomes_project 8 27318697 27323399 + MGP_CBAJ_P0088068 Adgra2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088069.1 MGP_CBAJ_G0033166.1 mouse_genomes_project 8 27321933 27326172 + MGP_CBAJ_P0088069 Adgra2 protein_coding protein_coding MGP_CBAJ_T0087754.1 MGP_CBAJ_G0033051.1 mouse_genomes_project 8 11776833 11793918 - Rasa3 protein_coding retained_intron MGP_CBAJ_T0087755.1 MGP_CBAJ_G0033051.1 mouse_genomes_project 8 11776833 11901519 - MGP_CBAJ_P0087755 Rasa3 protein_coding protein_coding MGP_CBAJ_T0087756.1 MGP_CBAJ_G0033051.1 mouse_genomes_project 8 11787349 11787923 - Rasa3 protein_coding retained_intron MGP_CBAJ_T0087757.1 MGP_CBAJ_G0033051.1 mouse_genomes_project 8 11805703 11816003 - Rasa3 protein_coding retained_intron MGP_CBAJ_T0087758.1 MGP_CBAJ_G0033051.1 mouse_genomes_project 8 11805704 11901367 - MGP_CBAJ_P0087758 Rasa3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087759.1 MGP_CBAJ_G0033051.1 mouse_genomes_project 8 11807989 11901399 - Rasa3 protein_coding retained_intron MGP_CBAJ_T0089310.1 MGP_CBAJ_G0033550.1 mouse_genomes_project 8 92283485 92286934 + MGP_CBAJ_P0089310 2310036O22Rik protein_coding protein_coding MGP_CBAJ_T0089440.1 MGP_CBAJ_G0033589.1 mouse_genomes_project 8 98766192 98766669 - MGP_CBAJ_P0089440 protein_coding protein_coding MGP_CBAJ_T0008984.1 MGP_CBAJ_G0007215.1 mouse_genomes_project 8 32834879 32847142 + lincRNA lincRNA MGP_CBAJ_T0089860.1 MGP_CBAJ_G0033746.1 mouse_genomes_project 8 116914633 116930021 + MGP_CBAJ_P0089860 Has3 protein_coding protein_coding MGP_CBAJ_T0089861.1 MGP_CBAJ_G0033746.1 mouse_genomes_project 8 116915227 116928293 + MGP_CBAJ_P0089861 Has3 protein_coding protein_coding MGP_CBAJ_T0089862.1 MGP_CBAJ_G0033746.1 mouse_genomes_project 8 116915282 116931684 + MGP_CBAJ_P0089862 Has3 protein_coding protein_coding MGP_CBAJ_T0100797.1 MGP_CBAJ_G0039052.1 mouse_genomes_project 8 40795032 40795164 - Gm23128 snoRNA snoRNA MGP_CBAJ_T0015744.1 MGP_CBAJ_G0013856.1 mouse_genomes_project 8 48616588 48616894 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0089057.1 MGP_CBAJ_G0033476.1 mouse_genomes_project 8 85991678 86052619 - MGP_CBAJ_P0089057 Smad1 protein_coding protein_coding MGP_CBAJ_T0089058.1 MGP_CBAJ_G0033476.1 mouse_genomes_project 8 85994845 86052619 - MGP_CBAJ_P0089058 Smad1 protein_coding protein_coding MGP_CBAJ_T0089059.1 MGP_CBAJ_G0033476.1 mouse_genomes_project 8 86008621 86052619 - MGP_CBAJ_P0089059 Smad1 protein_coding protein_coding MGP_CBAJ_T0090260.1 MGP_CBAJ_G0033873.1 mouse_genomes_project 8 134197132 134259791 + Jph3 protein_coding processed_transcript MGP_CBAJ_T0090261.1 MGP_CBAJ_G0033873.1 mouse_genomes_project 8 134200491 134264450 + MGP_CBAJ_P0090261 Jph3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090262.1 MGP_CBAJ_G0033873.1 mouse_genomes_project 8 134200491 134260995 + MGP_CBAJ_P0090262 Jph3 protein_coding protein_coding MGP_CBAJ_T0090263.1 MGP_CBAJ_G0033873.1 mouse_genomes_project 8 134223556 134252744 + Jph3 protein_coding retained_intron MGP_CBAJ_T0099568.1 MGP_CBAJ_G0037823.1 mouse_genomes_project 8 107490995 107491121 - Gm23494 snRNA snRNA MGP_CBAJ_T0089129.1 MGP_CBAJ_G0033503.1 mouse_genomes_project 8 90936240 90944384 + MGP_CBAJ_P0089129 Ddx39 protein_coding protein_coding MGP_CBAJ_T0089130.1 MGP_CBAJ_G0033503.1 mouse_genomes_project 8 90936331 90944310 + Ddx39 protein_coding retained_intron MGP_CBAJ_T0089131.1 MGP_CBAJ_G0033503.1 mouse_genomes_project 8 90936331 90944311 + MGP_CBAJ_P0089131 Ddx39 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089132.1 MGP_CBAJ_G0033503.1 mouse_genomes_project 8 90936335 90947950 + MGP_CBAJ_P0089132 Ddx39 protein_coding protein_coding MGP_CBAJ_T0089133.1 MGP_CBAJ_G0033503.1 mouse_genomes_project 8 90936611 90944384 + MGP_CBAJ_P0089133 Ddx39 protein_coding protein_coding MGP_CBAJ_T0089134.1 MGP_CBAJ_G0033503.1 mouse_genomes_project 8 90940648 90942326 + Ddx39 protein_coding retained_intron MGP_CBAJ_T0088614.1 MGP_CBAJ_G0033342.1 mouse_genomes_project 8 75292599 75305876 - MGP_CBAJ_P0088614 Zfp866 protein_coding protein_coding MGP_CBAJ_T0099550.1 MGP_CBAJ_G0037805.1 mouse_genomes_project 8 57107325 57107387 + Gm22841 snRNA snRNA MGP_CBAJ_T0088008.1 MGP_CBAJ_G0033148.1 mouse_genomes_project 8 25577250 25665686 + MGP_CBAJ_P0088008 Whsc1l1 protein_coding protein_coding MGP_CBAJ_T0088009.1 MGP_CBAJ_G0033148.1 mouse_genomes_project 8 25577933 25663377 + Whsc1l1 protein_coding retained_intron MGP_CBAJ_T0088010.1 MGP_CBAJ_G0033148.1 mouse_genomes_project 8 25577933 25720478 + MGP_CBAJ_P0088010 Whsc1l1 protein_coding protein_coding MGP_CBAJ_T0088011.1 MGP_CBAJ_G0033148.1 mouse_genomes_project 8 25577933 25715779 + MGP_CBAJ_P0088011 Whsc1l1 protein_coding protein_coding MGP_CBAJ_T0088012.1 MGP_CBAJ_G0033148.1 mouse_genomes_project 8 25577933 25666444 + MGP_CBAJ_P0088012 Whsc1l1 protein_coding protein_coding MGP_CBAJ_T0088013.1 MGP_CBAJ_G0033148.1 mouse_genomes_project 8 25577968 25649800 + Whsc1l1 protein_coding retained_intron MGP_CBAJ_T0088014.1 MGP_CBAJ_G0033148.1 mouse_genomes_project 8 25625365 25720478 + MGP_CBAJ_P0088014 Whsc1l1 protein_coding protein_coding MGP_CBAJ_T0088015.1 MGP_CBAJ_G0033148.1 mouse_genomes_project 8 25662905 25666422 + Whsc1l1 protein_coding retained_intron MGP_CBAJ_T0088016.1 MGP_CBAJ_G0033148.1 mouse_genomes_project 8 25688782 25715779 + MGP_CBAJ_P0088016 Whsc1l1 protein_coding protein_coding MGP_CBAJ_T0088017.1 MGP_CBAJ_G0033148.1 mouse_genomes_project 8 25693161 25707191 + Whsc1l1 protein_coding retained_intron MGP_CBAJ_T0088018.1 MGP_CBAJ_G0033148.1 mouse_genomes_project 8 25694591 25695618 + Whsc1l1 protein_coding retained_intron MGP_CBAJ_T0009073.1 MGP_CBAJ_G0007280.1 mouse_genomes_project 8 119446267 119648600 + D030068K23Rik lincRNA lincRNA MGP_CBAJ_T0009074.1 MGP_CBAJ_G0007280.1 mouse_genomes_project 8 119446268 119622671 + D030068K23Rik lincRNA lincRNA MGP_CBAJ_T0009075.1 MGP_CBAJ_G0007280.1 mouse_genomes_project 8 119643257 119680400 + D030068K23Rik lincRNA lincRNA MGP_CBAJ_T0088858.1 MGP_CBAJ_G0033409.1 mouse_genomes_project 8 77136556 77148383 - MGP_CBAJ_P0088858 Ushbp1 protein_coding protein_coding MGP_CBAJ_T0088657.1 MGP_CBAJ_G0033357.1 mouse_genomes_project 8 75685321 75693797 - MGP_CBAJ_P0088657 Rfxank protein_coding protein_coding MGP_CBAJ_T0088659.1 MGP_CBAJ_G0033357.1 mouse_genomes_project 8 75687907 75693825 - MGP_CBAJ_P0088659 Rfxank protein_coding unknown_likely_coding MGP_CBAJ_T0089741.1 MGP_CBAJ_G0033697.1 mouse_genomes_project 8 115117742 115129206 + MGP_CBAJ_P0089741 Elmo3 protein_coding protein_coding MGP_CBAJ_T0089174.1 MGP_CBAJ_G0033521.1 mouse_genomes_project 8 91454039 91480080 - MGP_CBAJ_P0089174 Zswim4 protein_coding protein_coding MGP_CBAJ_T0100795.1 MGP_CBAJ_G0039050.1 mouse_genomes_project 8 34695318 34697947 + Gm23123 snoRNA snoRNA MGP_CBAJ_T0088291.1 MGP_CBAJ_G0033245.1 mouse_genomes_project 8 48542985 48587194 + MGP_CBAJ_P0088291 Pdlim3 protein_coding protein_coding MGP_CBAJ_T0099557.1 MGP_CBAJ_G0037812.1 mouse_genomes_project 8 82540243 82540350 - Gm22509 snRNA snRNA MGP_CBAJ_T0089160.1 MGP_CBAJ_G0033514.1 mouse_genomes_project 8 91309822 91311890 - MGP_CBAJ_P0089160 protein_coding protein_coding MGP_CBAJ_T0087858.1 MGP_CBAJ_G0033095.1 mouse_genomes_project 8 21135162 21137859 - MGP_CBAJ_P0087858 protein_coding protein_coding MGP_CBAJ_T0015718.1 MGP_CBAJ_G0013830.1 mouse_genomes_project 8 11152316 11152586 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0008995.1 MGP_CBAJ_G0007223.1 mouse_genomes_project 8 42904395 42907622 - Gm26584 lincRNA lincRNA MGP_CBAJ_T0088602.1 MGP_CBAJ_G0033337.1 mouse_genomes_project 8 75163436 75177710 - MGP_CBAJ_P0088602 Zfp868 protein_coding protein_coding MGP_CBAJ_T0088603.1 MGP_CBAJ_G0033337.1 mouse_genomes_project 8 75163993 75171948 - MGP_CBAJ_P0088603 Zfp868 protein_coding protein_coding MGP_CBAJ_T0088604.1 MGP_CBAJ_G0033337.1 mouse_genomes_project 8 75164999 75166637 - Zfp868 protein_coding retained_intron MGP_CBAJ_T0088605.1 MGP_CBAJ_G0033337.1 mouse_genomes_project 8 75171465 75177707 - Zfp868 protein_coding retained_intron MGP_CBAJ_T0008999.1 MGP_CBAJ_G0007227.1 mouse_genomes_project 8 50137977 50312294 - lincRNA lincRNA MGP_CBAJ_T0099572.1 MGP_CBAJ_G0037827.1 mouse_genomes_project 8 120336890 120336992 - Gm25321 snRNA snRNA MGP_CBAJ_T0087587.1 MGP_CBAJ_G0033000.1 mouse_genomes_project 8 1323644 1339857 - Timm44 protein_coding retained_intron MGP_CBAJ_T0087588.1 MGP_CBAJ_G0033000.1 mouse_genomes_project 8 1323644 1339885 - MGP_CBAJ_P0087588 Timm44 protein_coding protein_coding MGP_CBAJ_T0087589.1 MGP_CBAJ_G0033000.1 mouse_genomes_project 8 1323662 1339843 - MGP_CBAJ_P0087589 Timm44 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087590.1 MGP_CBAJ_G0033000.1 mouse_genomes_project 8 1323897 1324649 - Timm44 protein_coding retained_intron MGP_CBAJ_T0087591.1 MGP_CBAJ_G0033000.1 mouse_genomes_project 8 1324013 1330930 - Timm44 protein_coding retained_intron MGP_CBAJ_T0087592.1 MGP_CBAJ_G0033000.1 mouse_genomes_project 8 1329997 1330867 - Timm44 protein_coding retained_intron MGP_CBAJ_T0087593.1 MGP_CBAJ_G0033000.1 mouse_genomes_project 8 1330178 1331547 - Timm44 protein_coding retained_intron MGP_CBAJ_T0087594.1 MGP_CBAJ_G0033000.1 mouse_genomes_project 8 1331228 1339854 - Timm44 protein_coding processed_transcript MGP_CBAJ_T0087595.1 MGP_CBAJ_G0033000.1 mouse_genomes_project 8 1331286 1339845 - Timm44 protein_coding retained_intron MGP_CBAJ_T0015749.1 MGP_CBAJ_G0013861.1 mouse_genomes_project 8 69268083 69269017 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010854.1 MGP_CBAJ_G0008992.1 mouse_genomes_project 8 90944913 90945020 - Mir1668 miRNA miRNA MGP_CBAJ_T0088233.1 MGP_CBAJ_G0033228.1 mouse_genomes_project 8 43411320 43455732 - MGP_CBAJ_P0088233 Asah1 protein_coding protein_coding MGP_CBAJ_T0088234.1 MGP_CBAJ_G0033228.1 mouse_genomes_project 8 43411782 43423428 - Asah1 protein_coding retained_intron MGP_CBAJ_T0088235.1 MGP_CBAJ_G0033228.1 mouse_genomes_project 8 43412448 43414994 - Asah1 protein_coding retained_intron MGP_CBAJ_T0088236.1 MGP_CBAJ_G0033228.1 mouse_genomes_project 8 43419570 43455594 - MGP_CBAJ_P0088236 Asah1 protein_coding protein_coding MGP_CBAJ_T0088237.1 MGP_CBAJ_G0033228.1 mouse_genomes_project 8 43427398 43455732 - MGP_CBAJ_P0088237 Asah1 protein_coding protein_coding MGP_CBAJ_T0100796.1 MGP_CBAJ_G0039051.1 mouse_genomes_project 8 40795031 40795164 - Gm23128 snoRNA snoRNA MGP_CBAJ_T0089524.1 MGP_CBAJ_G0033614.1 mouse_genomes_project 8 102232688 102266300 - MGP_CBAJ_P0089524 Bbs2 protein_coding protein_coding MGP_CBAJ_T0089525.1 MGP_CBAJ_G0033614.1 mouse_genomes_project 8 102232878 102234948 - Bbs2 protein_coding processed_transcript MGP_CBAJ_T0089526.1 MGP_CBAJ_G0033614.1 mouse_genomes_project 8 102239810 102244427 - Bbs2 protein_coding processed_transcript MGP_CBAJ_T0100831.1 MGP_CBAJ_G0039086.1 mouse_genomes_project 8 115898383 115898514 - Gm22972 snoRNA snoRNA MGP_CBAJ_T0090174.1 MGP_CBAJ_G0033854.1 mouse_genomes_project 8 132122524 132189459 + MGP_CBAJ_P0090174 Crispld2 protein_coding protein_coding MGP_CBAJ_T0090175.1 MGP_CBAJ_G0033854.1 mouse_genomes_project 8 132122594 132188196 + MGP_CBAJ_P0090175 Crispld2 protein_coding protein_coding MGP_CBAJ_T0090176.1 MGP_CBAJ_G0033854.1 mouse_genomes_project 8 132136414 132188196 + MGP_CBAJ_P0090176 Crispld2 protein_coding protein_coding MGP_CBAJ_T0090177.1 MGP_CBAJ_G0033854.1 mouse_genomes_project 8 132149518 132152041 + Crispld2 protein_coding processed_transcript MGP_CBAJ_T0090178.1 MGP_CBAJ_G0033854.1 mouse_genomes_project 8 132167198 132187091 + Crispld2 protein_coding retained_intron MGP_CBAJ_T0089095.1 MGP_CBAJ_G0033490.1 mouse_genomes_project 8 90294714 90295808 - MGP_CBAJ_P0089095 Gm10645 protein_coding protein_coding MGP_CBAJ_T0102229.1 MGP_CBAJ_G0040258.1 mouse_genomes_project 8 20972391 20977346 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0090340.1 MGP_CBAJ_G0033892.1 mouse_genomes_project 8 135180707 135183976 - MGP_CBAJ_P0090340 Pabpn1l protein_coding protein_coding MGP_CBAJ_T0087667.1 MGP_CBAJ_G0033031.1 mouse_genomes_project 8 10652776 10688562 + MGP_CBAJ_P0087667 Spaca7 protein_coding protein_coding MGP_CBAJ_T0089345.1 MGP_CBAJ_G0033559.1 mouse_genomes_project 8 92514091 92515030 + MGP_CBAJ_P0089345 Olfr371 protein_coding protein_coding MGP_CBAJ_T0088163.1 MGP_CBAJ_G0033211.1 mouse_genomes_project 8 37992258 38177531 - MGP_CBAJ_P0088163 Dlc1 protein_coding protein_coding MGP_CBAJ_T0088164.1 MGP_CBAJ_G0033211.1 mouse_genomes_project 8 37992258 38049061 - MGP_CBAJ_P0088164 Dlc1 protein_coding protein_coding MGP_CBAJ_T0088165.1 MGP_CBAJ_G0033211.1 mouse_genomes_project 8 37994754 38414756 - MGP_CBAJ_P0088165 Dlc1 protein_coding protein_coding MGP_CBAJ_T0088166.1 MGP_CBAJ_G0033211.1 mouse_genomes_project 8 37996706 38001678 - Dlc1 protein_coding retained_intron MGP_CBAJ_T0088167.1 MGP_CBAJ_G0033211.1 mouse_genomes_project 8 38017449 38048992 - Dlc1 protein_coding retained_intron MGP_CBAJ_T0088168.1 MGP_CBAJ_G0033211.1 mouse_genomes_project 8 38296467 38414671 - Dlc1 protein_coding retained_intron MGP_CBAJ_T0088169.1 MGP_CBAJ_G0033211.1 mouse_genomes_project 8 38307019 38414736 - Dlc1 protein_coding retained_intron MGP_CBAJ_T0088170.1 MGP_CBAJ_G0033211.1 mouse_genomes_project 8 38395734 38414750 - Dlc1 protein_coding retained_intron MGP_CBAJ_T0088171.1 MGP_CBAJ_G0033211.1 mouse_genomes_project 8 38398705 38415456 - MGP_CBAJ_P0088171 Dlc1 protein_coding protein_coding MGP_CBAJ_T0087503.1 MGP_CBAJ_G0032977.1 mouse_genomes_project 8 551957 560106 + protein_coding retained_intron MGP_CBAJ_T0087504.1 MGP_CBAJ_G0032977.1 mouse_genomes_project 8 551962 565008 + protein_coding retained_intron MGP_CBAJ_T0011604.1 MGP_CBAJ_G0009742.1 mouse_genomes_project 8 136212469 136212750 + Gm22314 misc_RNA misc_RNA MGP_CBAJ_T0089799.1 MGP_CBAJ_G0033722.1 mouse_genomes_project 8 115755376 115773698 + MGP_CBAJ_P0089799 Nutf2-ps1 protein_coding unknown_likely_coding MGP_CBAJ_T0015758.1 MGP_CBAJ_G0013870.1 mouse_genomes_project 8 85486859 85493218 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0090443.1 MGP_CBAJ_G0033916.1 mouse_genomes_project 8 136208044 136228961 + MGP_CBAJ_P0090443 Gas8 protein_coding protein_coding MGP_CBAJ_T0087856.1 MGP_CBAJ_G0033093.1 mouse_genomes_project 8 21013892 21016425 - MGP_CBAJ_P0087856 AY761184 protein_coding protein_coding MGP_CBAJ_T0088866.1 MGP_CBAJ_G0033413.1 mouse_genomes_project 8 77237850 77238674 + MGP_CBAJ_P0088866 Mrpl34 protein_coding protein_coding MGP_CBAJ_T0090041.1 MGP_CBAJ_G0033800.1 mouse_genomes_project 8 122477821 122482624 - Ldhd protein_coding retained_intron MGP_CBAJ_T0090042.1 MGP_CBAJ_G0033800.1 mouse_genomes_project 8 122479539 122484372 - Ldhd protein_coding retained_intron MGP_CBAJ_T0090043.1 MGP_CBAJ_G0033800.1 mouse_genomes_project 8 122480307 122484411 - MGP_CBAJ_P0090043 Ldhd protein_coding protein_coding MGP_CBAJ_T0008987.1 MGP_CBAJ_G0007217.1 mouse_genomes_project 8 34735514 34736826 - 1700104B16Rik lincRNA lincRNA MGP_CBAJ_T0008988.1 MGP_CBAJ_G0007217.1 mouse_genomes_project 8 34735514 34736831 - 1700104B16Rik lincRNA lincRNA MGP_CBAJ_T0089007.1 MGP_CBAJ_G0033459.1 mouse_genomes_project 8 81238431 81245262 + MGP_CBAJ_P0089007 Hmox1 protein_coding protein_coding MGP_CBAJ_T0089008.1 MGP_CBAJ_G0033459.1 mouse_genomes_project 8 81238481 81241112 + Hmox1 protein_coding retained_intron MGP_CBAJ_T0089009.1 MGP_CBAJ_G0033459.1 mouse_genomes_project 8 81238690 81241865 + MGP_CBAJ_P0089009 Hmox1 protein_coding protein_coding MGP_CBAJ_T0015750.1 MGP_CBAJ_G0013862.1 mouse_genomes_project 8 70845238 70845523 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0087668.1 MGP_CBAJ_G0033032.1 mouse_genomes_project 8 10704405 10772527 - MGP_CBAJ_P0087668 Tubgcp3 protein_coding protein_coding MGP_CBAJ_T0087669.1 MGP_CBAJ_G0033032.1 mouse_genomes_project 8 10704405 10772378 - MGP_CBAJ_P0087669 Tubgcp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087670.1 MGP_CBAJ_G0033032.1 mouse_genomes_project 8 10704407 10733039 - Tubgcp3 protein_coding retained_intron MGP_CBAJ_T0087671.1 MGP_CBAJ_G0033032.1 mouse_genomes_project 8 10705295 10733012 - Tubgcp3 protein_coding retained_intron MGP_CBAJ_T0087672.1 MGP_CBAJ_G0033032.1 mouse_genomes_project 8 10716986 10755657 - Tubgcp3 protein_coding retained_intron MGP_CBAJ_T0087673.1 MGP_CBAJ_G0033032.1 mouse_genomes_project 8 10725596 10772402 - Tubgcp3 protein_coding retained_intron MGP_CBAJ_T0087674.1 MGP_CBAJ_G0033032.1 mouse_genomes_project 8 10744967 10753939 - Tubgcp3 protein_coding retained_intron MGP_CBAJ_T0087675.1 MGP_CBAJ_G0033032.1 mouse_genomes_project 8 10749263 10755671 - MGP_CBAJ_P0087675 Tubgcp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087676.1 MGP_CBAJ_G0033032.1 mouse_genomes_project 8 10749298 10772238 - MGP_CBAJ_P0087676 Tubgcp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089704.1 MGP_CBAJ_G0033683.1 mouse_genomes_project 8 114709809 114718489 + MGP_CBAJ_P0089704 Ces2g protein_coding protein_coding MGP_CBAJ_T0090050.1 MGP_CBAJ_G0033806.1 mouse_genomes_project 8 122813288 122849376 - MGP_CBAJ_P0090050 Chst5 protein_coding protein_coding MGP_CBAJ_T0087790.1 MGP_CBAJ_G0033064.1 mouse_genomes_project 8 13219600 13237210 + MGP_CBAJ_P0087790 Cln8 protein_coding protein_coding MGP_CBAJ_T0087791.1 MGP_CBAJ_G0033064.1 mouse_genomes_project 8 13229382 13237553 + MGP_CBAJ_P0087791 Cln8 protein_coding protein_coding MGP_CBAJ_T0087792.1 MGP_CBAJ_G0033064.1 mouse_genomes_project 8 13229448 13244210 + MGP_CBAJ_P0087792 Cln8 protein_coding protein_coding MGP_CBAJ_T0087793.1 MGP_CBAJ_G0033064.1 mouse_genomes_project 8 13230341 13237280 + MGP_CBAJ_P0087793 Cln8 protein_coding protein_coding MGP_CBAJ_T0087794.1 MGP_CBAJ_G0033064.1 mouse_genomes_project 8 13230696 13237413 + MGP_CBAJ_P0087794 Cln8 protein_coding protein_coding MGP_CBAJ_T0087539.1 MGP_CBAJ_G0032985.1 mouse_genomes_project 8 684078 689038 + MGP_CBAJ_P0087539 Trappc5 protein_coding protein_coding MGP_CBAJ_T0090533.1 MGP_CBAJ_G0033953.1 mouse_genomes_project 8 139744274 139749610 - MGP_CBAJ_P0090533 Irf2bp2 protein_coding protein_coding MGP_CBAJ_T0087514.1 MGP_CBAJ_G0032981.1 mouse_genomes_project 8 625132 627307 - Pcp2 protein_coding retained_intron MGP_CBAJ_T0087515.1 MGP_CBAJ_G0032981.1 mouse_genomes_project 8 625132 627307 - MGP_CBAJ_P0087515 Pcp2 protein_coding protein_coding MGP_CBAJ_T0087516.1 MGP_CBAJ_G0032981.1 mouse_genomes_project 8 625138 627307 - Pcp2 protein_coding retained_intron MGP_CBAJ_T0087517.1 MGP_CBAJ_G0032981.1 mouse_genomes_project 8 625138 626764 - MGP_CBAJ_P0087517 Pcp2 protein_coding protein_coding MGP_CBAJ_T0087518.1 MGP_CBAJ_G0032981.1 mouse_genomes_project 8 625138 627044 - MGP_CBAJ_P0087518 Pcp2 protein_coding protein_coding MGP_CBAJ_T0087519.1 MGP_CBAJ_G0032981.1 mouse_genomes_project 8 625138 626811 - MGP_CBAJ_P0087519 Pcp2 protein_coding protein_coding MGP_CBAJ_T0087520.1 MGP_CBAJ_G0032981.1 mouse_genomes_project 8 625141 627287 - Pcp2 protein_coding processed_transcript MGP_CBAJ_T0088046.1 MGP_CBAJ_G0033160.1 mouse_genomes_project 8 26064808 26173512 - MGP_CBAJ_P0088046 Hook3 protein_coding protein_coding MGP_CBAJ_T0088047.1 MGP_CBAJ_G0033160.1 mouse_genomes_project 8 26081474 26121702 - MGP_CBAJ_P0088047 Hook3 protein_coding protein_coding MGP_CBAJ_T0088048.1 MGP_CBAJ_G0033160.1 mouse_genomes_project 8 26081483 26090130 - Hook3 protein_coding retained_intron MGP_CBAJ_T0098167.1 MGP_CBAJ_G0036440.1 mouse_genomes_project 8 74871901 74872197 + Gm25661 ribozyme ribozyme MGP_CBAJ_T0089157.1 MGP_CBAJ_G0033511.1 mouse_genomes_project 8 91271225 91285871 - MGP_CBAJ_P0089157 Il27ra protein_coding protein_coding MGP_CBAJ_T0008976.1 MGP_CBAJ_G0007208.1 mouse_genomes_project 8 22047406 22050497 + Gm17491 lincRNA lincRNA MGP_CBAJ_T0089237.1 MGP_CBAJ_G0033532.1 mouse_genomes_project 8 92062207 92069369 - MGP_CBAJ_P0089237 Dand5 protein_coding protein_coding MGP_CBAJ_T0011593.1 MGP_CBAJ_G0009731.1 mouse_genomes_project 8 70359172 70359315 + Gm25403 misc_RNA misc_RNA MGP_CBAJ_T0089855.1 MGP_CBAJ_G0033743.1 mouse_genomes_project 8 116490070 116545160 + MGP_CBAJ_P0089855 Cdh3 protein_coding protein_coding MGP_CBAJ_T0100810.1 MGP_CBAJ_G0039065.1 mouse_genomes_project 8 68719302 68719433 + Gm24580 snoRNA snoRNA MGP_CBAJ_T0099538.1 MGP_CBAJ_G0037793.1 mouse_genomes_project 8 24799220 24799323 + Gm23898 snRNA snRNA MGP_CBAJ_T0089092.1 MGP_CBAJ_G0033487.1 mouse_genomes_project 8 89373238 89452710 - MGP_CBAJ_P0089092 Il15 protein_coding protein_coding MGP_CBAJ_T0087688.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11000720 11009525 + MGP_CBAJ_P0087688 Mcf2l protein_coding protein_coding MGP_CBAJ_T0087689.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11000741 11149429 + MGP_CBAJ_P0087689 Mcf2l protein_coding protein_coding MGP_CBAJ_T0087690.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11000862 11019239 + Mcf2l protein_coding processed_transcript MGP_CBAJ_T0087691.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11044386 11151281 + MGP_CBAJ_P0087691 Mcf2l protein_coding protein_coding MGP_CBAJ_T0087692.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11045023 11150885 + MGP_CBAJ_P0087692 Mcf2l protein_coding protein_coding MGP_CBAJ_T0087693.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11045041 11122628 + Mcf2l protein_coding processed_transcript MGP_CBAJ_T0087694.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11045105 11149685 + MGP_CBAJ_P0087694 Mcf2l protein_coding protein_coding MGP_CBAJ_T0087695.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11045106 11145334 + MGP_CBAJ_P0087695 Mcf2l protein_coding protein_coding MGP_CBAJ_T0087696.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11055762 11148553 + MGP_CBAJ_P0087696 Mcf2l protein_coding protein_coding MGP_CBAJ_T0087697.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11076958 11118619 + Mcf2l protein_coding retained_intron MGP_CBAJ_T0087698.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11076992 11144405 + MGP_CBAJ_P0087698 Mcf2l protein_coding protein_coding MGP_CBAJ_T0087699.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11078454 11149651 + MGP_CBAJ_P0087699 Mcf2l protein_coding protein_coding MGP_CBAJ_T0087700.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11078522 11150877 + MGP_CBAJ_P0087700 Mcf2l protein_coding protein_coding MGP_CBAJ_T0087701.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11114747 11141922 + MGP_CBAJ_P0087701 Mcf2l protein_coding protein_coding MGP_CBAJ_T0087702.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11114762 11150881 + MGP_CBAJ_P0087702 Mcf2l protein_coding protein_coding MGP_CBAJ_T0087703.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11131161 11150881 + MGP_CBAJ_P0087703 Mcf2l protein_coding protein_coding MGP_CBAJ_T0087704.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11141869 11150903 + MGP_CBAJ_P0087704 Mcf2l protein_coding protein_coding MGP_CBAJ_T0087705.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11141885 11148470 + MGP_CBAJ_P0087705 Mcf2l protein_coding protein_coding MGP_CBAJ_T0087706.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11142193 11147815 + MGP_CBAJ_P0087706 Mcf2l protein_coding protein_coding MGP_CBAJ_T0087707.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11143437 11145741 + Mcf2l protein_coding retained_intron MGP_CBAJ_T0087708.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11143936 11149375 + MGP_CBAJ_P0087708 Mcf2l protein_coding protein_coding MGP_CBAJ_T0087709.1 MGP_CBAJ_G0033034.1 mouse_genomes_project 8 11147551 11149383 + Mcf2l protein_coding retained_intron MGP_CBAJ_T0100825.1 MGP_CBAJ_G0039080.1 mouse_genomes_project 8 97397627 97397759 - Gm24212 snoRNA snoRNA MGP_CBAJ_T0089342.1 MGP_CBAJ_G0033556.1 mouse_genomes_project 8 92350237 92351834 + MGP_CBAJ_P0089342 Wdr83os protein_coding protein_coding MGP_CBAJ_T0089113.1 MGP_CBAJ_G0033498.1 mouse_genomes_project 8 90773224 90795998 - MGP_CBAJ_P0089113 Tecr protein_coding protein_coding MGP_CBAJ_T0089114.1 MGP_CBAJ_G0033498.1 mouse_genomes_project 8 90773224 90795998 - MGP_CBAJ_P0089114 Tecr protein_coding protein_coding MGP_CBAJ_T0089115.1 MGP_CBAJ_G0033498.1 mouse_genomes_project 8 90773224 90795936 - MGP_CBAJ_P0089115 Tecr protein_coding protein_coding MGP_CBAJ_T0011579.1 MGP_CBAJ_G0009717.1 mouse_genomes_project 8 617248 617575 + Gm22204 misc_RNA misc_RNA MGP_CBAJ_T0089800.1 MGP_CBAJ_G0033723.1 mouse_genomes_project 8 115775643 115787988 + MGP_CBAJ_P0089800 Edc4 protein_coding protein_coding MGP_CBAJ_T0089801.1 MGP_CBAJ_G0033723.1 mouse_genomes_project 8 115775713 115787971 + MGP_CBAJ_P0089801 Edc4 protein_coding protein_coding MGP_CBAJ_T0089802.1 MGP_CBAJ_G0033723.1 mouse_genomes_project 8 115775839 115789671 + MGP_CBAJ_P0089802 Edc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089803.1 MGP_CBAJ_G0033723.1 mouse_genomes_project 8 115781731 115782908 + Edc4 protein_coding retained_intron MGP_CBAJ_T0089804.1 MGP_CBAJ_G0033723.1 mouse_genomes_project 8 115782140 115784295 + MGP_CBAJ_P0089804 Edc4 protein_coding protein_coding MGP_CBAJ_T0089805.1 MGP_CBAJ_G0033723.1 mouse_genomes_project 8 115782154 115783476 + MGP_CBAJ_P0089805 Edc4 protein_coding protein_coding MGP_CBAJ_T0089806.1 MGP_CBAJ_G0033723.1 mouse_genomes_project 8 115785030 115786091 + Edc4 protein_coding retained_intron MGP_CBAJ_T0088916.1 MGP_CBAJ_G0033427.1 mouse_genomes_project 8 77482365 77494248 + MGP_CBAJ_P0088916 Jak3 protein_coding unknown_likely_coding MGP_CBAJ_T0088917.1 MGP_CBAJ_G0033427.1 mouse_genomes_project 8 77482400 77486018 + Jak3 protein_coding retained_intron MGP_CBAJ_T0088918.1 MGP_CBAJ_G0033427.1 mouse_genomes_project 8 77484181 77495919 + Jak3 protein_coding retained_intron MGP_CBAJ_T0011598.1 MGP_CBAJ_G0009736.1 mouse_genomes_project 8 102927757 102928027 - Gm22846 misc_RNA misc_RNA MGP_CBAJ_T0009009.1 MGP_CBAJ_G0007236.1 mouse_genomes_project 8 76422265 76423274 + 2010320M18Rik lincRNA lincRNA MGP_CBAJ_T0102230.1 MGP_CBAJ_G0040259.1 mouse_genomes_project 8 21070014 21074966 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0088887.1 MGP_CBAJ_G0033417.1 mouse_genomes_project 8 77279635 77296278 - MGP_CBAJ_P0088887 Plvap protein_coding protein_coding MGP_CBAJ_T0088799.1 MGP_CBAJ_G0033390.1 mouse_genomes_project 8 76401280 76404105 + MGP_CBAJ_P0088799 Rab3a protein_coding protein_coding MGP_CBAJ_T0088800.1 MGP_CBAJ_G0033390.1 mouse_genomes_project 8 76401881 76403124 + Rab3a protein_coding retained_intron MGP_CBAJ_T0089640.1 MGP_CBAJ_G0033655.1 mouse_genomes_project 8 104221887 104243085 - MGP_CBAJ_P0089640 Slc38a7 protein_coding unknown_likely_coding MGP_CBAJ_T0089641.1 MGP_CBAJ_G0033655.1 mouse_genomes_project 8 104229330 104231109 - Slc38a7 protein_coding retained_intron MGP_CBAJ_T0089642.1 MGP_CBAJ_G0033655.1 mouse_genomes_project 8 104231307 104233283 - Slc38a7 protein_coding retained_intron MGP_CBAJ_T0087492.1 MGP_CBAJ_G0032974.1 mouse_genomes_project 8 461877 467860 + MGP_CBAJ_P0087492 Zfp358 protein_coding protein_coding MGP_CBAJ_T0089883.1 MGP_CBAJ_G0033755.1 mouse_genomes_project 8 117158250 117193067 - MGP_CBAJ_P0089883 Terf2 protein_coding protein_coding MGP_CBAJ_T0089884.1 MGP_CBAJ_G0033755.1 mouse_genomes_project 8 117158252 117192712 - MGP_CBAJ_P0089884 Terf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089885.1 MGP_CBAJ_G0033755.1 mouse_genomes_project 8 117158252 117193067 - MGP_CBAJ_P0089885 Terf2 protein_coding protein_coding MGP_CBAJ_T0089886.1 MGP_CBAJ_G0033755.1 mouse_genomes_project 8 117158778 117193036 - MGP_CBAJ_P0089886 Terf2 protein_coding protein_coding MGP_CBAJ_T0089887.1 MGP_CBAJ_G0033755.1 mouse_genomes_project 8 117164367 117193069 - MGP_CBAJ_P0089887 Terf2 protein_coding protein_coding MGP_CBAJ_T0089888.1 MGP_CBAJ_G0033755.1 mouse_genomes_project 8 117165169 117168726 - Terf2 protein_coding retained_intron MGP_CBAJ_T0089889.1 MGP_CBAJ_G0033755.1 mouse_genomes_project 8 117168278 117170264 - Terf2 protein_coding retained_intron MGP_CBAJ_T0089890.1 MGP_CBAJ_G0033755.1 mouse_genomes_project 8 117168287 117172040 - Terf2 protein_coding retained_intron MGP_CBAJ_T0088510.1 MGP_CBAJ_G0033308.1 mouse_genomes_project 8 69519242 69628718 - MGP_CBAJ_P0088510 Cpe protein_coding protein_coding MGP_CBAJ_T0090154.1 MGP_CBAJ_G0033846.1 mouse_genomes_project 8 131685378 131689559 + MGP_CBAJ_P0090154 Adad2 protein_coding protein_coding MGP_CBAJ_T0010827.1 MGP_CBAJ_G0008965.1 mouse_genomes_project 8 11335683 11335751 - Mir1968 miRNA miRNA MGP_CBAJ_T0089042.1 MGP_CBAJ_G0033470.1 mouse_genomes_project 8 85074755 85084289 - MGP_CBAJ_P0089042 protein_coding protein_coding MGP_CBAJ_T0089759.1 MGP_CBAJ_G0033703.1 mouse_genomes_project 8 115216664 115257927 - MGP_CBAJ_P0089759 Kctd19 protein_coding protein_coding MGP_CBAJ_T0089760.1 MGP_CBAJ_G0033703.1 mouse_genomes_project 8 115216664 115257927 - MGP_CBAJ_P0089760 Kctd19 protein_coding protein_coding MGP_CBAJ_T0089761.1 MGP_CBAJ_G0033703.1 mouse_genomes_project 8 115216799 115222543 - MGP_CBAJ_P0089761 Kctd19 protein_coding protein_coding MGP_CBAJ_T0089762.1 MGP_CBAJ_G0033703.1 mouse_genomes_project 8 115230951 115257881 - MGP_CBAJ_P0089762 Kctd19 protein_coding nonsense_mediated_decay MGP_CBAJ_T0010843.1 MGP_CBAJ_G0008981.1 mouse_genomes_project 8 60475960 60476069 + Gm25992 miRNA miRNA MGP_CBAJ_T0087873.1 MGP_CBAJ_G0033108.1 mouse_genomes_project 8 21578529 21589471 + MGP_CBAJ_P0087873 Alg11 protein_coding protein_coding MGP_CBAJ_T0087874.1 MGP_CBAJ_G0033108.1 mouse_genomes_project 8 21578530 21589471 + MGP_CBAJ_P0087874 Alg11 protein_coding protein_coding MGP_CBAJ_T0087875.1 MGP_CBAJ_G0033108.1 mouse_genomes_project 8 21578548 21583256 + MGP_CBAJ_P0087875 Alg11 protein_coding protein_coding MGP_CBAJ_T0087876.1 MGP_CBAJ_G0033108.1 mouse_genomes_project 8 21586859 21587723 + Alg11 protein_coding processed_transcript MGP_CBAJ_T0099565.1 MGP_CBAJ_G0037820.1 mouse_genomes_project 8 94102067 94102175 - Gm22305 snRNA snRNA MGP_CBAJ_T0088395.1 MGP_CBAJ_G0033276.1 mouse_genomes_project 8 57207402 57266654 - MGP_CBAJ_P0088395 Neil3 protein_coding protein_coding MGP_CBAJ_T0088396.1 MGP_CBAJ_G0033276.1 mouse_genomes_project 8 57230555 57236313 - Neil3 protein_coding processed_transcript MGP_CBAJ_T0088397.1 MGP_CBAJ_G0033276.1 mouse_genomes_project 8 57230555 57236367 - MGP_CBAJ_P0088397 Neil3 protein_coding protein_coding MGP_CBAJ_T0088398.1 MGP_CBAJ_G0033276.1 mouse_genomes_project 8 57230581 57237448 - MGP_CBAJ_P0088398 Neil3 protein_coding protein_coding MGP_CBAJ_T0088399.1 MGP_CBAJ_G0033276.1 mouse_genomes_project 8 57231233 57266555 - Neil3 protein_coding retained_intron MGP_CBAJ_T0088400.1 MGP_CBAJ_G0033276.1 mouse_genomes_project 8 57234392 57266267 - MGP_CBAJ_P0088400 Neil3 protein_coding protein_coding MGP_CBAJ_T0099542.1 MGP_CBAJ_G0037797.1 mouse_genomes_project 8 37795042 37795193 - Gm26150 snRNA snRNA MGP_CBAJ_T0088898.1 MGP_CBAJ_G0033424.1 mouse_genomes_project 8 77399138 77408613 + Fam129c protein_coding retained_intron MGP_CBAJ_T0088899.1 MGP_CBAJ_G0033424.1 mouse_genomes_project 8 77400436 77408391 + MGP_CBAJ_P0088899 Fam129c protein_coding protein_coding MGP_CBAJ_T0088900.1 MGP_CBAJ_G0033424.1 mouse_genomes_project 8 77400521 77402428 + Fam129c protein_coding processed_transcript MGP_CBAJ_T0088901.1 MGP_CBAJ_G0033424.1 mouse_genomes_project 8 77401255 77402922 + Fam129c protein_coding retained_intron MGP_CBAJ_T0088902.1 MGP_CBAJ_G0033424.1 mouse_genomes_project 8 77402954 77403631 + Fam129c protein_coding retained_intron MGP_CBAJ_T0088903.1 MGP_CBAJ_G0033424.1 mouse_genomes_project 8 77403038 77408613 + Fam129c protein_coding retained_intron MGP_CBAJ_T0088904.1 MGP_CBAJ_G0033424.1 mouse_genomes_project 8 77405432 77408260 + MGP_CBAJ_P0088904 Fam129c protein_coding nonsense_mediated_decay MGP_CBAJ_T0088905.1 MGP_CBAJ_G0033424.1 mouse_genomes_project 8 77405649 77408622 + MGP_CBAJ_P0088905 Fam129c protein_coding protein_coding MGP_CBAJ_T0090386.1 MGP_CBAJ_G0033903.1 mouse_genomes_project 8 135859500 135871903 + MGP_CBAJ_P0090386 Spata33 protein_coding protein_coding MGP_CBAJ_T0018219.1 MGP_CBAJ_G0015460.1 mouse_genomes_project 8 84075413 84164685 + processed_transcript processed_transcript MGP_CBAJ_T0018220.1 MGP_CBAJ_G0015460.1 mouse_genomes_project 8 84134301 84271557 + processed_transcript processed_transcript MGP_CBAJ_T0018221.1 MGP_CBAJ_G0015460.1 mouse_genomes_project 8 84266945 84270785 + processed_transcript processed_transcript MGP_CBAJ_T0010872.1 MGP_CBAJ_G0009010.1 mouse_genomes_project 8 100948929 100948987 - Gm22151 miRNA miRNA MGP_CBAJ_T0100816.1 MGP_CBAJ_G0039071.1 mouse_genomes_project 8 76554423 76554554 - Snora68 snoRNA snoRNA MGP_CBAJ_T0015765.1 MGP_CBAJ_G0013877.1 mouse_genomes_project 8 88766718 88767069 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0088600.1 MGP_CBAJ_G0033335.1 mouse_genomes_project 8 74841747 74842713 - MGP_CBAJ_P0088600 protein_coding protein_coding MGP_CBAJ_T0089915.1 MGP_CBAJ_G0033762.1 mouse_genomes_project 8 119026924 119129155 + MGP_CBAJ_P0089915 Zfhx3 protein_coding protein_coding MGP_CBAJ_T0089916.1 MGP_CBAJ_G0033762.1 mouse_genomes_project 8 119040845 119313708 + MGP_CBAJ_P0089916 Zfhx3 protein_coding protein_coding MGP_CBAJ_T0010899.1 MGP_CBAJ_G0009037.1 mouse_genomes_project 8 134477593 134477656 + Mir7237 miRNA miRNA MGP_CBAJ_T0089736.1 MGP_CBAJ_G0033693.1 mouse_genomes_project 8 115088339 115093659 + MGP_CBAJ_P0089736 Nol3 protein_coding protein_coding MGP_CBAJ_T0005303.1 MGP_CBAJ_G0004488.1 mouse_genomes_project 8 117112714 117114228 - Gm16208 antisense antisense MGP_CBAJ_T0005251.1 MGP_CBAJ_G0004447.1 mouse_genomes_project 8 11028276 11044750 - Gm15351 antisense antisense MGP_CBAJ_T0005252.1 MGP_CBAJ_G0004447.1 mouse_genomes_project 8 11041656 11044889 - Gm15351 antisense antisense MGP_CBAJ_T0005253.1 MGP_CBAJ_G0004447.1 mouse_genomes_project 8 11043712 11044604 - Gm15351 antisense antisense MGP_CBAJ_T0090002.1 MGP_CBAJ_G0033793.1 mouse_genomes_project 8 121787027 121812938 - MGP_CBAJ_P0090002 Clec18a protein_coding nonsense_mediated_decay MGP_CBAJ_T0090003.1 MGP_CBAJ_G0033793.1 mouse_genomes_project 8 121787027 121812938 - MGP_CBAJ_P0090003 Clec18a protein_coding nonsense_mediated_decay MGP_CBAJ_T0090004.1 MGP_CBAJ_G0033793.1 mouse_genomes_project 8 121787027 121812938 - MGP_CBAJ_P0090004 Clec18a protein_coding nonsense_mediated_decay MGP_CBAJ_T0090005.1 MGP_CBAJ_G0033793.1 mouse_genomes_project 8 121799350 121812712 - MGP_CBAJ_P0090005 Clec18a protein_coding protein_coding MGP_CBAJ_T0090006.1 MGP_CBAJ_G0033793.1 mouse_genomes_project 8 121799350 121812938 - MGP_CBAJ_P0090006 Clec18a protein_coding protein_coding MGP_CBAJ_T0090007.1 MGP_CBAJ_G0033793.1 mouse_genomes_project 8 121799351 121826728 - MGP_CBAJ_P0090007 Clec18a protein_coding nonsense_mediated_decay MGP_CBAJ_T0090008.1 MGP_CBAJ_G0033793.1 mouse_genomes_project 8 121799351 121812938 - MGP_CBAJ_P0090008 Clec18a protein_coding nonsense_mediated_decay MGP_CBAJ_T0089583.1 MGP_CBAJ_G0033634.1 mouse_genomes_project 8 103110570 103123112 - MGP_CBAJ_P0089583 Dok4 protein_coding protein_coding MGP_CBAJ_T0015762.1 MGP_CBAJ_G0013874.1 mouse_genomes_project 8 87816483 87817477 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015775.1 MGP_CBAJ_G0013887.1 mouse_genomes_project 8 102609045 102609635 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0088921.1 MGP_CBAJ_G0033430.1 mouse_genomes_project 8 77519934 77532741 - MGP_CBAJ_P0088921 Fcho1 protein_coding protein_coding MGP_CBAJ_T0088922.1 MGP_CBAJ_G0033430.1 mouse_genomes_project 8 77519941 77537148 - MGP_CBAJ_P0088922 Fcho1 protein_coding protein_coding MGP_CBAJ_T0088923.1 MGP_CBAJ_G0033430.1 mouse_genomes_project 8 77519967 77537098 - Fcho1 protein_coding retained_intron MGP_CBAJ_T0088924.1 MGP_CBAJ_G0033430.1 mouse_genomes_project 8 77520200 77537098 - MGP_CBAJ_P0088924 Fcho1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088925.1 MGP_CBAJ_G0033430.1 mouse_genomes_project 8 77521184 77522654 - Fcho1 protein_coding retained_intron MGP_CBAJ_T0088926.1 MGP_CBAJ_G0033430.1 mouse_genomes_project 8 77521236 77523727 - Fcho1 protein_coding retained_intron MGP_CBAJ_T0088927.1 MGP_CBAJ_G0033430.1 mouse_genomes_project 8 77524087 77527089 - MGP_CBAJ_P0088927 Fcho1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088928.1 MGP_CBAJ_G0033430.1 mouse_genomes_project 8 77525895 77528141 - Fcho1 protein_coding retained_intron MGP_CBAJ_T0088929.1 MGP_CBAJ_G0033430.1 mouse_genomes_project 8 77527302 77537136 - MGP_CBAJ_P0088929 Fcho1 protein_coding protein_coding MGP_CBAJ_T0088930.1 MGP_CBAJ_G0033430.1 mouse_genomes_project 8 77527397 77533299 - Fcho1 protein_coding processed_transcript MGP_CBAJ_T0088931.1 MGP_CBAJ_G0033430.1 mouse_genomes_project 8 77528322 77537079 - Fcho1 protein_coding retained_intron MGP_CBAJ_T0088932.1 MGP_CBAJ_G0033430.1 mouse_genomes_project 8 77528720 77534781 - MGP_CBAJ_P0088932 Fcho1 protein_coding protein_coding MGP_CBAJ_T0088938.1 MGP_CBAJ_G0033433.1 mouse_genomes_project 8 77771955 77787015 + MGP_CBAJ_P0088938 Zfp617 protein_coding protein_coding MGP_CBAJ_T0100803.1 MGP_CBAJ_G0039058.1 mouse_genomes_project 8 52029409 52029541 - Gm25830 snoRNA snoRNA MGP_CBAJ_T0089709.1 MGP_CBAJ_G0033687.1 mouse_genomes_project 8 114963497 115029804 + MGP_CBAJ_P0089709 Cbfb protein_coding protein_coding MGP_CBAJ_T0089710.1 MGP_CBAJ_G0033687.1 mouse_genomes_project 8 114965815 115029796 + MGP_CBAJ_P0089710 Cbfb protein_coding protein_coding MGP_CBAJ_T0089711.1 MGP_CBAJ_G0033687.1 mouse_genomes_project 8 114965815 115029796 + MGP_CBAJ_P0089711 Cbfb protein_coding protein_coding MGP_CBAJ_T0089712.1 MGP_CBAJ_G0033687.1 mouse_genomes_project 8 114966016 115029796 + MGP_CBAJ_P0089712 Cbfb protein_coding protein_coding MGP_CBAJ_T0089713.1 MGP_CBAJ_G0033687.1 mouse_genomes_project 8 114966180 114976054 + Cbfb protein_coding retained_intron MGP_CBAJ_T0089714.1 MGP_CBAJ_G0033687.1 mouse_genomes_project 8 114966563 115001029 + Cbfb protein_coding processed_transcript MGP_CBAJ_T0089715.1 MGP_CBAJ_G0033687.1 mouse_genomes_project 8 114966635 115001009 + Cbfb protein_coding processed_transcript MGP_CBAJ_T0087837.1 MGP_CBAJ_G0033076.1 mouse_genomes_project 8 17799495 17802634 - MGP_CBAJ_P0087837 Defb38 protein_coding protein_coding MGP_CBAJ_T0088655.1 MGP_CBAJ_G0033355.1 mouse_genomes_project 8 75632234 75639532 + MGP_CBAJ_P0088655 Hapln4 protein_coding protein_coding MGP_CBAJ_T0090512.1 MGP_CBAJ_G0033944.1 mouse_genomes_project 8 138680864 138684406 + MGP_CBAJ_P0090512 Map10 protein_coding protein_coding MGP_CBAJ_T0089479.1 MGP_CBAJ_G0033602.1 mouse_genomes_project 8 101112008 101140900 - MGP_CBAJ_P0089479 Ces1b protein_coding protein_coding MGP_CBAJ_T0088477.1 MGP_CBAJ_G0033300.1 mouse_genomes_project 8 65750039 65952736 + MGP_CBAJ_P0088477 Sh3rf1 protein_coding protein_coding MGP_CBAJ_T0009029.1 MGP_CBAJ_G0007254.1 mouse_genomes_project 8 94632461 94670429 - Gm10637 lincRNA lincRNA MGP_CBAJ_T0009030.1 MGP_CBAJ_G0007254.1 mouse_genomes_project 8 94665679 94670440 - Gm10637 lincRNA lincRNA MGP_CBAJ_T0090313.1 MGP_CBAJ_G0033884.1 mouse_genomes_project 8 134982763 134989250 - MGP_CBAJ_P0090313 Snai3 protein_coding protein_coding MGP_CBAJ_T0089810.1 MGP_CBAJ_G0033726.1 mouse_genomes_project 8 115834348 115836217 - MGP_CBAJ_P0089810 Ctrl protein_coding protein_coding MGP_CBAJ_T0088357.1 MGP_CBAJ_G0033263.1 mouse_genomes_project 8 50342743 50388319 - MGP_CBAJ_P0088357 Trappc11 protein_coding protein_coding MGP_CBAJ_T0088358.1 MGP_CBAJ_G0033263.1 mouse_genomes_project 8 50342756 50379872 - Trappc11 protein_coding retained_intron MGP_CBAJ_T0088359.1 MGP_CBAJ_G0033263.1 mouse_genomes_project 8 50342757 50388322 - Trappc11 protein_coding retained_intron MGP_CBAJ_T0088360.1 MGP_CBAJ_G0033263.1 mouse_genomes_project 8 50359132 50366237 - MGP_CBAJ_P0088360 Trappc11 protein_coding protein_coding MGP_CBAJ_T0088361.1 MGP_CBAJ_G0033263.1 mouse_genomes_project 8 50379506 50382884 - Trappc11 protein_coding retained_intron MGP_CBAJ_T0087850.1 MGP_CBAJ_G0033088.1 mouse_genomes_project 8 20240052 20245103 + MGP_CBAJ_P0087850 Defb33 protein_coding protein_coding MGP_CBAJ_T0089665.1 MGP_CBAJ_G0033665.1 mouse_genomes_project 8 113965206 113986883 - MGP_CBAJ_P0089665 Cmtm1 protein_coding protein_coding MGP_CBAJ_T0089666.1 MGP_CBAJ_G0033665.1 mouse_genomes_project 8 113965507 113986861 - MGP_CBAJ_P0089666 Cmtm1 protein_coding protein_coding MGP_CBAJ_T0089667.1 MGP_CBAJ_G0033665.1 mouse_genomes_project 8 113966126 113986974 - MGP_CBAJ_P0089667 Cmtm1 protein_coding protein_coding MGP_CBAJ_T0087845.1 MGP_CBAJ_G0033083.1 mouse_genomes_project 8 17985046 17987832 + MGP_CBAJ_P0087845 Defb4 protein_coding protein_coding MGP_CBAJ_T0005311.1 MGP_CBAJ_G0004495.1 mouse_genomes_project 8 125887254 125892620 - Gm16116 antisense antisense MGP_CBAJ_T0010898.1 MGP_CBAJ_G0009036.1 mouse_genomes_project 8 133431391 133431489 - Gm27530 miRNA miRNA MGP_CBAJ_T0088935.1 MGP_CBAJ_G0033432.1 mouse_genomes_project 8 77756248 77763967 + MGP_CBAJ_P0088935 Zfp882 protein_coding protein_coding MGP_CBAJ_T0088936.1 MGP_CBAJ_G0033432.1 mouse_genomes_project 8 77756297 77761207 + MGP_CBAJ_P0088936 Zfp882 protein_coding protein_coding MGP_CBAJ_T0088937.1 MGP_CBAJ_G0033432.1 mouse_genomes_project 8 77756545 77761211 + MGP_CBAJ_P0088937 Zfp882 protein_coding protein_coding MGP_CBAJ_T0087715.1 MGP_CBAJ_G0033038.1 mouse_genomes_project 8 11208830 11236959 - MGP_CBAJ_P0087715 Pcid2 protein_coding protein_coding MGP_CBAJ_T0087716.1 MGP_CBAJ_G0033038.1 mouse_genomes_project 8 11208830 11236959 - MGP_CBAJ_P0087716 Pcid2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087717.1 MGP_CBAJ_G0033038.1 mouse_genomes_project 8 11211365 11218325 - Pcid2 protein_coding processed_transcript MGP_CBAJ_T0087718.1 MGP_CBAJ_G0033038.1 mouse_genomes_project 8 11211537 11236331 - Pcid2 protein_coding processed_transcript MGP_CBAJ_T0087719.1 MGP_CBAJ_G0033038.1 mouse_genomes_project 8 11216966 11230238 - MGP_CBAJ_P0087719 Pcid2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087720.1 MGP_CBAJ_G0033038.1 mouse_genomes_project 8 11217015 11236321 - MGP_CBAJ_P0087720 Pcid2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0005288.1 MGP_CBAJ_G0004476.1 mouse_genomes_project 8 74546728 74547439 + antisense antisense MGP_CBAJ_T0090388.1 MGP_CBAJ_G0033905.1 mouse_genomes_project 8 135886782 135890734 - MGP_CBAJ_P0090388 Spata2l protein_coding protein_coding MGP_CBAJ_T0090389.1 MGP_CBAJ_G0033905.1 mouse_genomes_project 8 135886785 135890737 - MGP_CBAJ_P0090389 Spata2l protein_coding protein_coding MGP_CBAJ_T0089614.1 MGP_CBAJ_G0033645.1 mouse_genomes_project 8 103630681 103644228 + Usb1 protein_coding retained_intron MGP_CBAJ_T0089615.1 MGP_CBAJ_G0033645.1 mouse_genomes_project 8 103630718 103647470 + MGP_CBAJ_P0089615 Usb1 protein_coding protein_coding MGP_CBAJ_T0089616.1 MGP_CBAJ_G0033645.1 mouse_genomes_project 8 103645107 103646787 + Usb1 protein_coding retained_intron MGP_CBAJ_T0089078.1 MGP_CBAJ_G0033484.1 mouse_genomes_project 8 87625651 87749974 - MGP_CBAJ_P0089078 Gab1 protein_coding protein_coding MGP_CBAJ_T0100813.1 MGP_CBAJ_G0039068.1 mouse_genomes_project 8 72500720 72500870 - Gm24677 snoRNA snoRNA MGP_CBAJ_T0090044.1 MGP_CBAJ_G0033801.1 mouse_genomes_project 8 122507907 122538024 + MGP_CBAJ_P0090044 Zfp1 protein_coding protein_coding MGP_CBAJ_T0087741.1 MGP_CBAJ_G0033044.1 mouse_genomes_project 8 11458644 11502883 + MGP_CBAJ_P0087741 Tmco3 protein_coding protein_coding MGP_CBAJ_T0087742.1 MGP_CBAJ_G0033044.1 mouse_genomes_project 8 11458796 11498186 + MGP_CBAJ_P0087742 Tmco3 protein_coding unknown_likely_coding MGP_CBAJ_T0005244.1 MGP_CBAJ_G0004442.1 mouse_genomes_project 8 9091498 9111036 + Gm15418 antisense antisense MGP_CBAJ_T0089060.1 MGP_CBAJ_G0033477.1 mouse_genomes_project 8 86346596 86384590 + MGP_CBAJ_P0089060 Otud4 protein_coding protein_coding MGP_CBAJ_T0089061.1 MGP_CBAJ_G0033477.1 mouse_genomes_project 8 86346682 86384538 + MGP_CBAJ_P0089061 Otud4 protein_coding protein_coding MGP_CBAJ_T0089062.1 MGP_CBAJ_G0033477.1 mouse_genomes_project 8 86358258 86366086 + Otud4 protein_coding retained_intron MGP_CBAJ_T0089063.1 MGP_CBAJ_G0033477.1 mouse_genomes_project 8 86358670 86368109 + Otud4 protein_coding retained_intron MGP_CBAJ_T0089064.1 MGP_CBAJ_G0033477.1 mouse_genomes_project 8 86367949 86375355 + MGP_CBAJ_P0089064 Otud4 protein_coding protein_coding MGP_CBAJ_T0089065.1 MGP_CBAJ_G0033477.1 mouse_genomes_project 8 86373688 86378244 + MGP_CBAJ_P0089065 Otud4 protein_coding protein_coding MGP_CBAJ_T0010881.1 MGP_CBAJ_G0009019.1 mouse_genomes_project 8 115475417 115475525 + Mir1966 miRNA miRNA MGP_CBAJ_T0005324.1 MGP_CBAJ_G0004508.1 mouse_genomes_project 8 137125573 137135793 - Gm15775 antisense antisense MGP_CBAJ_T0009091.1 MGP_CBAJ_G0007294.1 mouse_genomes_project 8 133828322 133828732 + Gm26784 lincRNA lincRNA MGP_CBAJ_T0087639.1 MGP_CBAJ_G0033021.1 mouse_genomes_project 8 9436940 9452771 + MGP_CBAJ_P0087639 Carkd protein_coding protein_coding MGP_CBAJ_T0087640.1 MGP_CBAJ_G0033021.1 mouse_genomes_project 8 9437001 9454444 + MGP_CBAJ_P0087640 Carkd protein_coding nonsense_mediated_decay MGP_CBAJ_T0087641.1 MGP_CBAJ_G0033021.1 mouse_genomes_project 8 9437002 9452771 + MGP_CBAJ_P0087641 Carkd protein_coding protein_coding MGP_CBAJ_T0087642.1 MGP_CBAJ_G0033021.1 mouse_genomes_project 8 9437027 9446493 + Carkd protein_coding retained_intron MGP_CBAJ_T0087643.1 MGP_CBAJ_G0033021.1 mouse_genomes_project 8 9437067 9449720 + Carkd protein_coding retained_intron MGP_CBAJ_T0087644.1 MGP_CBAJ_G0033021.1 mouse_genomes_project 8 9437087 9452747 + MGP_CBAJ_P0087644 Carkd protein_coding protein_coding MGP_CBAJ_T0087645.1 MGP_CBAJ_G0033021.1 mouse_genomes_project 8 9449445 9452751 + Carkd protein_coding retained_intron MGP_CBAJ_T0100823.1 MGP_CBAJ_G0039078.1 mouse_genomes_project 8 93619956 93620080 + Gm23904 snoRNA snoRNA MGP_CBAJ_T0088647.1 MGP_CBAJ_G0033352.1 mouse_genomes_project 8 75561462 75588018 - MGP_CBAJ_P0088647 Mau2 protein_coding protein_coding MGP_CBAJ_T0088648.1 MGP_CBAJ_G0033352.1 mouse_genomes_project 8 75561462 75588067 - MGP_CBAJ_P0088648 Mau2 protein_coding protein_coding MGP_CBAJ_T0008992.1 MGP_CBAJ_G0007220.1 mouse_genomes_project 8 35294310 35303660 + Gm29243 lincRNA lincRNA MGP_CBAJ_T0089792.1 MGP_CBAJ_G0033717.1 mouse_genomes_project 8 115580638 115625301 - MGP_CBAJ_P0089792 Gfod2 protein_coding protein_coding MGP_CBAJ_T0089793.1 MGP_CBAJ_G0033717.1 mouse_genomes_project 8 115584201 115625267 - MGP_CBAJ_P0089793 Gfod2 protein_coding protein_coding MGP_CBAJ_T0089794.1 MGP_CBAJ_G0033717.1 mouse_genomes_project 8 115593870 115625233 - Gfod2 protein_coding processed_transcript MGP_CBAJ_T0087660.1 MGP_CBAJ_G0033027.1 mouse_genomes_project 8 9845935 9860787 + MGP_CBAJ_P0087660 Tex29 protein_coding protein_coding MGP_CBAJ_T0087661.1 MGP_CBAJ_G0033027.1 mouse_genomes_project 8 9846072 9849620 + Tex29 protein_coding processed_transcript MGP_CBAJ_T0087662.1 MGP_CBAJ_G0033027.1 mouse_genomes_project 8 9846380 9860731 + MGP_CBAJ_P0087662 Tex29 protein_coding protein_coding MGP_CBAJ_T0087663.1 MGP_CBAJ_G0033027.1 mouse_genomes_project 8 9847522 9860783 + Tex29 protein_coding processed_transcript MGP_CBAJ_T0090245.1 MGP_CBAJ_G0033867.1 mouse_genomes_project 8 133463118 133465843 + MGP_CBAJ_P0090245 Foxc2 protein_coding protein_coding MGP_CBAJ_T0087541.1 MGP_CBAJ_G0032987.1 mouse_genomes_project 8 726536 737026 - MGP_CBAJ_P0087541 Clec4g protein_coding protein_coding MGP_CBAJ_T0087542.1 MGP_CBAJ_G0032987.1 mouse_genomes_project 8 735536 740124 - MGP_CBAJ_P0087542 Clec4g protein_coding protein_coding MGP_CBAJ_T0087543.1 MGP_CBAJ_G0032987.1 mouse_genomes_project 8 736686 738126 - Clec4g protein_coding retained_intron MGP_CBAJ_T0010856.1 MGP_CBAJ_G0008994.1 mouse_genomes_project 8 91252621 91252740 - Mir1199 miRNA miRNA MGP_CBAJ_T0102232.1 MGP_CBAJ_G0040261.1 mouse_genomes_project 8 108660620 108662009 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0087897.1 MGP_CBAJ_G0033120.1 mouse_genomes_project 8 22201458 22206048 + MGP_CBAJ_P0087897 Dkk4 protein_coding protein_coding MGP_CBAJ_T0002288.1 MGP_CBAJ_G0002202.1 mouse_genomes_project 8 11426990 11428076 - TEC TEC MGP_CBAJ_T0010905.1 MGP_CBAJ_G0009043.1 mouse_genomes_project 8 141630333 141630411 - Mir21c miRNA miRNA MGP_CBAJ_T0100842.1 MGP_CBAJ_G0039097.1 mouse_genomes_project 8 140150998 140151132 - Gm26397 snoRNA snoRNA MGP_CBAJ_T0089767.1 MGP_CBAJ_G0033705.1 mouse_genomes_project 8 115313639 115317673 - MGP_CBAJ_P0089767 Tppp3 protein_coding protein_coding MGP_CBAJ_T0089768.1 MGP_CBAJ_G0033705.1 mouse_genomes_project 8 115313815 115315557 - MGP_CBAJ_P0089768 Tppp3 protein_coding protein_coding MGP_CBAJ_T0089769.1 MGP_CBAJ_G0033705.1 mouse_genomes_project 8 115313829 115314809 - MGP_CBAJ_P0089769 Tppp3 protein_coding protein_coding MGP_CBAJ_T0010849.1 MGP_CBAJ_G0008987.1 mouse_genomes_project 8 76547772 76547835 - Mir7067 miRNA miRNA MGP_CBAJ_T0009034.1 MGP_CBAJ_G0007258.1 mouse_genomes_project 8 94948289 94951612 + Gm19872 lincRNA lincRNA MGP_CBAJ_T0088658.1 MGP_CBAJ_G0033358.1 mouse_genomes_project 8 75685842 75688254 + MGP_CBAJ_P0088658 Nr2c2ap protein_coding protein_coding MGP_CBAJ_T0009018.1 MGP_CBAJ_G0007244.1 mouse_genomes_project 8 87910693 87945001 + lincRNA lincRNA MGP_CBAJ_T0088256.1 MGP_CBAJ_G0033240.1 mouse_genomes_project 8 47841619 47869406 - MGP_CBAJ_P0088256 Klkb1 protein_coding protein_coding MGP_CBAJ_T0009003.1 MGP_CBAJ_G0007231.1 mouse_genomes_project 8 65477565 65480037 + B230317F23Rik lincRNA lincRNA MGP_CBAJ_T0089845.1 MGP_CBAJ_G0033739.1 mouse_genomes_project 8 116156499 116208731 + MGP_CBAJ_P0089845 Prmt7 protein_coding protein_coding MGP_CBAJ_T0089846.1 MGP_CBAJ_G0033739.1 mouse_genomes_project 8 116156586 116186436 + MGP_CBAJ_P0089846 Prmt7 protein_coding protein_coding MGP_CBAJ_T0089847.1 MGP_CBAJ_G0033739.1 mouse_genomes_project 8 116156600 116196596 + Prmt7 protein_coding retained_intron MGP_CBAJ_T0089848.1 MGP_CBAJ_G0033739.1 mouse_genomes_project 8 116156781 116178325 + MGP_CBAJ_P0089848 Prmt7 protein_coding protein_coding MGP_CBAJ_T0089849.1 MGP_CBAJ_G0033739.1 mouse_genomes_project 8 116158089 116189106 + MGP_CBAJ_P0089849 Prmt7 protein_coding protein_coding MGP_CBAJ_T0089850.1 MGP_CBAJ_G0033739.1 mouse_genomes_project 8 116185571 116188441 + Prmt7 protein_coding processed_transcript MGP_CBAJ_T0089851.1 MGP_CBAJ_G0033739.1 mouse_genomes_project 8 116188807 116198134 + Prmt7 protein_coding processed_transcript MGP_CBAJ_T0010830.1 MGP_CBAJ_G0008968.1 mouse_genomes_project 8 14605831 14605913 - Mir3106 miRNA miRNA MGP_CBAJ_T0090256.1 MGP_CBAJ_G0033872.1 mouse_genomes_project 8 134035312 134107389 - MGP_CBAJ_P0090256 Zcchc14 protein_coding protein_coding MGP_CBAJ_T0090257.1 MGP_CBAJ_G0033872.1 mouse_genomes_project 8 134036959 134043534 - MGP_CBAJ_P0090257 Zcchc14 protein_coding protein_coding MGP_CBAJ_T0090258.1 MGP_CBAJ_G0033872.1 mouse_genomes_project 8 134045233 134046238 - Zcchc14 protein_coding retained_intron MGP_CBAJ_T0090259.1 MGP_CBAJ_G0033872.1 mouse_genomes_project 8 134048328 134080338 - Zcchc14 protein_coding retained_intron MGP_CBAJ_T0088264.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48117786 48463545 + MGP_CBAJ_P0088264 Sorbs2 protein_coding protein_coding MGP_CBAJ_T0088265.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48117792 48412221 + Sorbs2 protein_coding retained_intron MGP_CBAJ_T0088266.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48117796 48429196 + MGP_CBAJ_P0088266 Sorbs2 protein_coding protein_coding MGP_CBAJ_T0088267.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48117816 48410752 + MGP_CBAJ_P0088267 Sorbs2 protein_coding protein_coding MGP_CBAJ_T0088268.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48248121 48377934 + MGP_CBAJ_P0088268 Sorbs2 protein_coding protein_coding MGP_CBAJ_T0088269.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48248348 48377956 + MGP_CBAJ_P0088269 Sorbs2 protein_coding protein_coding MGP_CBAJ_T0088270.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48248561 48274683 + Sorbs2 protein_coding processed_transcript MGP_CBAJ_T0088271.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48248577 48378759 + MGP_CBAJ_P0088271 Sorbs2 protein_coding protein_coding MGP_CBAJ_T0088272.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48285955 48456796 + MGP_CBAJ_P0088272 Sorbs2 protein_coding protein_coding MGP_CBAJ_T0088273.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48286333 48410752 + MGP_CBAJ_P0088273 Sorbs2 protein_coding protein_coding MGP_CBAJ_T0088274.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48286339 48463542 + MGP_CBAJ_P0088274 Sorbs2 protein_coding protein_coding MGP_CBAJ_T0088275.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48286359 48377793 + Sorbs2 protein_coding retained_intron MGP_CBAJ_T0088276.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48286372 48378716 + MGP_CBAJ_P0088276 Sorbs2 protein_coding protein_coding MGP_CBAJ_T0088277.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48286447 48374546 + Sorbs2 protein_coding retained_intron MGP_CBAJ_T0088278.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48286467 48406535 + MGP_CBAJ_P0088278 Sorbs2 protein_coding protein_coding MGP_CBAJ_T0088279.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48289656 48391212 + MGP_CBAJ_P0088279 Sorbs2 protein_coding protein_coding MGP_CBAJ_T0088280.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48317816 48391261 + MGP_CBAJ_P0088280 Sorbs2 protein_coding protein_coding MGP_CBAJ_T0088281.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48317820 48391221 + MGP_CBAJ_P0088281 Sorbs2 protein_coding protein_coding MGP_CBAJ_T0088282.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48365120 48463551 + MGP_CBAJ_P0088282 Sorbs2 protein_coding protein_coding MGP_CBAJ_T0088283.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48395232 48463543 + MGP_CBAJ_P0088283 Sorbs2 protein_coding protein_coding MGP_CBAJ_T0088284.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48395968 48433525 + Sorbs2 protein_coding processed_transcript MGP_CBAJ_T0088285.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48403720 48426673 + MGP_CBAJ_P0088285 Sorbs2 protein_coding protein_coding MGP_CBAJ_T0088286.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48404436 48426641 + MGP_CBAJ_P0088286 Sorbs2 protein_coding protein_coding MGP_CBAJ_T0088287.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48406235 48409773 + Sorbs2 protein_coding retained_intron MGP_CBAJ_T0088288.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48409550 48428870 + MGP_CBAJ_P0088288 Sorbs2 protein_coding protein_coding MGP_CBAJ_T0088289.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48438862 48439574 + Sorbs2 protein_coding retained_intron MGP_CBAJ_T0088290.1 MGP_CBAJ_G0033244.1 mouse_genomes_project 8 48441458 48443022 + Sorbs2 protein_coding processed_transcript MGP_CBAJ_T0089530.1 MGP_CBAJ_G0033618.1 mouse_genomes_project 8 102365662 102366899 + MGP_CBAJ_P0089530 Mt1 protein_coding protein_coding MGP_CBAJ_T0005318.1 MGP_CBAJ_G0004502.1 mouse_genomes_project 8 134276588 134277543 + Gm20406 antisense antisense MGP_CBAJ_T0088769.1 MGP_CBAJ_G0033378.1 mouse_genomes_project 8 76115124 76123424 + MGP_CBAJ_P0088769 Fkbp8 protein_coding protein_coding MGP_CBAJ_T0088770.1 MGP_CBAJ_G0033378.1 mouse_genomes_project 8 76115147 76123422 + MGP_CBAJ_P0088770 Fkbp8 protein_coding protein_coding MGP_CBAJ_T0088771.1 MGP_CBAJ_G0033378.1 mouse_genomes_project 8 76115162 76119876 + Fkbp8 protein_coding retained_intron MGP_CBAJ_T0088772.1 MGP_CBAJ_G0033378.1 mouse_genomes_project 8 76115246 76123423 + MGP_CBAJ_P0088772 Fkbp8 protein_coding protein_coding MGP_CBAJ_T0088773.1 MGP_CBAJ_G0033378.1 mouse_genomes_project 8 76115409 76118023 + Fkbp8 protein_coding retained_intron MGP_CBAJ_T0088774.1 MGP_CBAJ_G0033378.1 mouse_genomes_project 8 76116216 76116986 + MGP_CBAJ_P0088774 Fkbp8 protein_coding protein_coding MGP_CBAJ_T0088775.1 MGP_CBAJ_G0033378.1 mouse_genomes_project 8 76118552 76122257 + Fkbp8 protein_coding retained_intron MGP_CBAJ_T0088776.1 MGP_CBAJ_G0033378.1 mouse_genomes_project 8 76119162 76123052 + Fkbp8 protein_coding retained_intron MGP_CBAJ_T0088777.1 MGP_CBAJ_G0033378.1 mouse_genomes_project 8 76119549 76123067 + Fkbp8 protein_coding retained_intron MGP_CBAJ_T0088778.1 MGP_CBAJ_G0033378.1 mouse_genomes_project 8 76119606 76122963 + Fkbp8 protein_coding retained_intron MGP_CBAJ_T0088779.1 MGP_CBAJ_G0033378.1 mouse_genomes_project 8 76122202 76123153 + MGP_CBAJ_P0088779 Fkbp8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090253.1 MGP_CBAJ_G0033871.1 mouse_genomes_project 8 134022148 134035370 + MGP_CBAJ_P0090253 Map1lc3b protein_coding protein_coding MGP_CBAJ_T0090254.1 MGP_CBAJ_G0033871.1 mouse_genomes_project 8 134022264 134024897 + Map1lc3b protein_coding retained_intron MGP_CBAJ_T0090255.1 MGP_CBAJ_G0033871.1 mouse_genomes_project 8 134022268 134034554 + Map1lc3b protein_coding retained_intron MGP_CBAJ_T0089298.1 MGP_CBAJ_G0033545.1 mouse_genomes_project 8 92215769 92221225 + MGP_CBAJ_P0089298 Prdx2 protein_coding protein_coding MGP_CBAJ_T0089299.1 MGP_CBAJ_G0033545.1 mouse_genomes_project 8 92215793 92221225 + MGP_CBAJ_P0089299 Prdx2 protein_coding protein_coding MGP_CBAJ_T0089300.1 MGP_CBAJ_G0033545.1 mouse_genomes_project 8 92215876 92218540 + Prdx2 protein_coding retained_intron MGP_CBAJ_T0089301.1 MGP_CBAJ_G0033545.1 mouse_genomes_project 8 92215876 92217321 + Prdx2 protein_coding retained_intron MGP_CBAJ_T0089302.1 MGP_CBAJ_G0033545.1 mouse_genomes_project 8 92215949 92221225 + MGP_CBAJ_P0089302 Prdx2 protein_coding protein_coding MGP_CBAJ_T0089303.1 MGP_CBAJ_G0033545.1 mouse_genomes_project 8 92216039 92217922 + MGP_CBAJ_P0089303 Prdx2 protein_coding protein_coding MGP_CBAJ_T0089304.1 MGP_CBAJ_G0033545.1 mouse_genomes_project 8 92216421 92221050 + MGP_CBAJ_P0089304 Prdx2 protein_coding protein_coding MGP_CBAJ_T0089305.1 MGP_CBAJ_G0033545.1 mouse_genomes_project 8 92217750 92220706 + Prdx2 protein_coding retained_intron MGP_CBAJ_T0009067.1 MGP_CBAJ_G0007275.1 mouse_genomes_project 8 114954391 114963191 + Gm3830 lincRNA lincRNA MGP_CBAJ_T0005249.1 MGP_CBAJ_G0004446.1 mouse_genomes_project 8 11009256 11012857 - Gm15353 antisense antisense MGP_CBAJ_T0005250.1 MGP_CBAJ_G0004446.1 mouse_genomes_project 8 11009400 11012847 - Gm15353 antisense antisense MGP_CBAJ_T0018236.1 MGP_CBAJ_G0015468.1 mouse_genomes_project 8 134900432 134902838 + Gm20681 processed_transcript processed_transcript MGP_CBAJ_T0088255.1 MGP_CBAJ_G0033239.1 mouse_genomes_project 8 47808362 47832160 - MGP_CBAJ_P0088255 F11 protein_coding protein_coding MGP_CBAJ_T0087582.1 MGP_CBAJ_G0032997.1 mouse_genomes_project 8 1312126 1315336 + MGP_CBAJ_P0087582 Tgfbr3l protein_coding protein_coding MGP_CBAJ_T0087583.1 MGP_CBAJ_G0032997.1 mouse_genomes_project 8 1312545 1313434 + Tgfbr3l protein_coding processed_transcript MGP_CBAJ_T0087584.1 MGP_CBAJ_G0032997.1 mouse_genomes_project 8 1314241 1315336 + Tgfbr3l protein_coding processed_transcript MGP_CBAJ_T0087938.1 MGP_CBAJ_G0033130.1 mouse_genomes_project 8 22896069 22913676 - MGP_CBAJ_P0087938 Golga7 protein_coding protein_coding MGP_CBAJ_T0087939.1 MGP_CBAJ_G0033130.1 mouse_genomes_project 8 22896069 22913623 - MGP_CBAJ_P0087939 Golga7 protein_coding protein_coding MGP_CBAJ_T0087940.1 MGP_CBAJ_G0033130.1 mouse_genomes_project 8 22898849 22901762 - Golga7 protein_coding retained_intron MGP_CBAJ_T0089170.1 MGP_CBAJ_G0033519.1 mouse_genomes_project 8 91392037 91406014 + MGP_CBAJ_P0089170 4930432K21Rik protein_coding protein_coding MGP_CBAJ_T0089171.1 MGP_CBAJ_G0033519.1 mouse_genomes_project 8 91392165 91416458 + MGP_CBAJ_P0089171 4930432K21Rik protein_coding protein_coding MGP_CBAJ_T0089172.1 MGP_CBAJ_G0033519.1 mouse_genomes_project 8 91392258 91416457 + MGP_CBAJ_P0089172 4930432K21Rik protein_coding protein_coding MGP_CBAJ_T0088906.1 MGP_CBAJ_G0033425.1 mouse_genomes_project 8 77411551 77425407 + MGP_CBAJ_P0088906 Colgalt1 protein_coding protein_coding MGP_CBAJ_T0005325.1 MGP_CBAJ_G0004509.1 mouse_genomes_project 8 138172287 138175211 - Gm16237 antisense antisense MGP_CBAJ_T0089517.1 MGP_CBAJ_G0033613.1 mouse_genomes_project 8 102201905 102232656 + MGP_CBAJ_P0089517 Ogfod1 protein_coding protein_coding MGP_CBAJ_T0089518.1 MGP_CBAJ_G0033613.1 mouse_genomes_project 8 102201945 102232656 + MGP_CBAJ_P0089518 Ogfod1 protein_coding protein_coding MGP_CBAJ_T0089519.1 MGP_CBAJ_G0033613.1 mouse_genomes_project 8 102201967 102204160 + Ogfod1 protein_coding retained_intron MGP_CBAJ_T0089520.1 MGP_CBAJ_G0033613.1 mouse_genomes_project 8 102201970 102222508 + Ogfod1 protein_coding processed_transcript MGP_CBAJ_T0089521.1 MGP_CBAJ_G0033613.1 mouse_genomes_project 8 102201998 102232656 + MGP_CBAJ_P0089521 Ogfod1 protein_coding protein_coding MGP_CBAJ_T0089522.1 MGP_CBAJ_G0033613.1 mouse_genomes_project 8 102202003 102220840 + Ogfod1 protein_coding processed_transcript MGP_CBAJ_T0089523.1 MGP_CBAJ_G0033613.1 mouse_genomes_project 8 102219787 102222509 + Ogfod1 protein_coding retained_intron MGP_CBAJ_T0088539.1 MGP_CBAJ_G0033317.1 mouse_genomes_project 8 71603562 71618566 - Tma16 protein_coding retained_intron MGP_CBAJ_T0088540.1 MGP_CBAJ_G0033317.1 mouse_genomes_project 8 71606693 71618588 - MGP_CBAJ_P0088540 Tma16 protein_coding protein_coding MGP_CBAJ_T0088541.1 MGP_CBAJ_G0033317.1 mouse_genomes_project 8 71612679 71618599 - Tma16 protein_coding retained_intron MGP_CBAJ_T0087780.1 MGP_CBAJ_G0033062.1 mouse_genomes_project 8 12351075 13181313 + MGP_CBAJ_P0087780 Dlgap2 protein_coding protein_coding MGP_CBAJ_T0087781.1 MGP_CBAJ_G0033062.1 mouse_genomes_project 8 12351085 13181885 + MGP_CBAJ_P0087781 Dlgap2 protein_coding protein_coding MGP_CBAJ_T0087782.1 MGP_CBAJ_G0033062.1 mouse_genomes_project 8 12445825 13180913 + MGP_CBAJ_P0087782 Dlgap2 protein_coding protein_coding MGP_CBAJ_T0087783.1 MGP_CBAJ_G0033062.1 mouse_genomes_project 8 12445825 13181313 + MGP_CBAJ_P0087783 Dlgap2 protein_coding protein_coding MGP_CBAJ_T0087784.1 MGP_CBAJ_G0033062.1 mouse_genomes_project 8 12679038 12809217 + Dlgap2 protein_coding processed_transcript MGP_CBAJ_T0087785.1 MGP_CBAJ_G0033062.1 mouse_genomes_project 8 12679252 12836999 + Dlgap2 protein_coding processed_transcript MGP_CBAJ_T0087786.1 MGP_CBAJ_G0033062.1 mouse_genomes_project 8 12679300 13165892 + Dlgap2 protein_coding retained_intron MGP_CBAJ_T0087787.1 MGP_CBAJ_G0033062.1 mouse_genomes_project 8 13058365 13082302 + Dlgap2 protein_coding processed_transcript MGP_CBAJ_T0087789.1 MGP_CBAJ_G0033062.1 mouse_genomes_project 8 13102612 13181603 + Dlgap2 protein_coding processed_transcript MGP_CBAJ_T0100806.1 MGP_CBAJ_G0039061.1 mouse_genomes_project 8 61608353 61608467 + Gm25379 snoRNA snoRNA MGP_CBAJ_T0090247.1 MGP_CBAJ_G0033869.1 mouse_genomes_project 8 133951121 133965256 - MGP_CBAJ_P0090247 1700018B08Rik protein_coding protein_coding MGP_CBAJ_T0090248.1 MGP_CBAJ_G0033869.1 mouse_genomes_project 8 133951170 133965171 - MGP_CBAJ_P0090248 1700018B08Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0090249.1 MGP_CBAJ_G0033869.1 mouse_genomes_project 8 133951170 133965171 - MGP_CBAJ_P0090249 1700018B08Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0100783.1 MGP_CBAJ_G0039038.1 mouse_genomes_project 8 13594806 13594939 - Gm24231 snoRNA snoRNA MGP_CBAJ_T0088781.1 MGP_CBAJ_G0033380.1 mouse_genomes_project 8 76186522 76189331 + MGP_CBAJ_P0088781 Isyna1 protein_coding protein_coding MGP_CBAJ_T0089354.1 MGP_CBAJ_G0033564.1 mouse_genomes_project 8 92807974 92844039 + MGP_CBAJ_P0089354 Gpt2 protein_coding protein_coding MGP_CBAJ_T0089355.1 MGP_CBAJ_G0033564.1 mouse_genomes_project 8 92808005 92841326 + MGP_CBAJ_P0089355 Gpt2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089356.1 MGP_CBAJ_G0033564.1 mouse_genomes_project 8 92808007 92808706 + Gpt2 protein_coding processed_transcript MGP_CBAJ_T0089357.1 MGP_CBAJ_G0033564.1 mouse_genomes_project 8 92832447 92837986 + Gpt2 protein_coding retained_intron MGP_CBAJ_T0089358.1 MGP_CBAJ_G0033564.1 mouse_genomes_project 8 92835908 92842172 + Gpt2 protein_coding processed_transcript MGP_CBAJ_T0088829.1 MGP_CBAJ_G0033405.1 mouse_genomes_project 8 77014134 77107590 + MGP_CBAJ_P0088829 Myo9b protein_coding protein_coding MGP_CBAJ_T0088830.1 MGP_CBAJ_G0033405.1 mouse_genomes_project 8 77014134 77107590 + MGP_CBAJ_P0088830 Myo9b protein_coding protein_coding MGP_CBAJ_T0088831.1 MGP_CBAJ_G0033405.1 mouse_genomes_project 8 77014134 77107590 + MGP_CBAJ_P0088831 Myo9b protein_coding protein_coding MGP_CBAJ_T0088832.1 MGP_CBAJ_G0033405.1 mouse_genomes_project 8 77014165 77080750 + MGP_CBAJ_P0088832 Myo9b protein_coding unknown_likely_coding MGP_CBAJ_T0088833.1 MGP_CBAJ_G0033405.1 mouse_genomes_project 8 77089819 77107595 + MGP_CBAJ_P0088833 Myo9b protein_coding unknown_likely_coding MGP_CBAJ_T0005307.1 MGP_CBAJ_G0004491.1 mouse_genomes_project 8 121401098 121407576 + Gm15894 antisense antisense MGP_CBAJ_T0088964.1 MGP_CBAJ_G0033441.1 mouse_genomes_project 8 78146401 78150480 + MGP_CBAJ_P0088964 Fam32a protein_coding protein_coding MGP_CBAJ_T0010860.1 MGP_CBAJ_G0008998.1 mouse_genomes_project 8 91451707 91451782 + Mir23a miRNA miRNA MGP_CBAJ_T0089023.1 MGP_CBAJ_G0033464.1 mouse_genomes_project 8 83645991 83959419 - MGP_CBAJ_P0089023 Arhgap10 protein_coding protein_coding MGP_CBAJ_T0089187.1 MGP_CBAJ_G0033525.1 mouse_genomes_project 8 91631339 91760867 + Cacna1a protein_coding retained_intron MGP_CBAJ_T0089188.1 MGP_CBAJ_G0033525.1 mouse_genomes_project 8 91657563 91881859 + MGP_CBAJ_P0089188 Cacna1a protein_coding protein_coding MGP_CBAJ_T0089189.1 MGP_CBAJ_G0033525.1 mouse_genomes_project 8 91657576 91881675 + MGP_CBAJ_P0089189 Cacna1a protein_coding protein_coding MGP_CBAJ_T0089190.1 MGP_CBAJ_G0033525.1 mouse_genomes_project 8 91788794 91795719 + Cacna1a protein_coding processed_transcript MGP_CBAJ_T0089191.1 MGP_CBAJ_G0033525.1 mouse_genomes_project 8 91813294 91821907 + Cacna1a protein_coding retained_intron MGP_CBAJ_T0089192.1 MGP_CBAJ_G0033525.1 mouse_genomes_project 8 91842816 91853470 + Cacna1a protein_coding retained_intron MGP_CBAJ_T0089193.1 MGP_CBAJ_G0033525.1 mouse_genomes_project 8 91842829 91854432 + Cacna1a protein_coding retained_intron MGP_CBAJ_T0089194.1 MGP_CBAJ_G0033525.1 mouse_genomes_project 8 91842855 91876096 + Cacna1a protein_coding retained_intron MGP_CBAJ_T0089195.1 MGP_CBAJ_G0033525.1 mouse_genomes_project 8 91843358 91859245 + Cacna1a protein_coding processed_transcript MGP_CBAJ_T0089196.1 MGP_CBAJ_G0033525.1 mouse_genomes_project 8 91856358 91881862 + MGP_CBAJ_P0089196 Cacna1a protein_coding unknown_likely_coding MGP_CBAJ_T0009068.1 MGP_CBAJ_G0007276.1 mouse_genomes_project 8 115484287 115497246 - Gm5914 lincRNA lincRNA MGP_CBAJ_T0009069.1 MGP_CBAJ_G0007276.1 mouse_genomes_project 8 115484301 115497381 - Gm5914 lincRNA lincRNA MGP_CBAJ_T0009084.1 MGP_CBAJ_G0007289.1 mouse_genomes_project 8 133321986 133322250 + Gm28324 lincRNA lincRNA MGP_CBAJ_T0009100.1 MGP_CBAJ_G0007300.1 mouse_genomes_project 8 135889618 135902598 + lincRNA lincRNA MGP_CBAJ_T0010842.1 MGP_CBAJ_G0008980.1 mouse_genomes_project 8 55467265 55467410 - Gm44387 miRNA miRNA MGP_CBAJ_T0090113.1 MGP_CBAJ_G0033830.1 mouse_genomes_project 8 128866145 128922919 + MGP_CBAJ_P0090113 Gan protein_coding protein_coding MGP_CBAJ_T0011587.1 MGP_CBAJ_G0009725.1 mouse_genomes_project 8 25667421 25667743 + Gm23094 misc_RNA misc_RNA MGP_CBAJ_T0088188.1 MGP_CBAJ_G0033219.1 mouse_genomes_project 8 42480884 42499920 - MGP_CBAJ_P0088188 Cnot7 protein_coding protein_coding MGP_CBAJ_T0088189.1 MGP_CBAJ_G0033219.1 mouse_genomes_project 8 42480886 42504015 - MGP_CBAJ_P0088189 Cnot7 protein_coding protein_coding MGP_CBAJ_T0088190.1 MGP_CBAJ_G0033219.1 mouse_genomes_project 8 42480887 42499884 - Cnot7 protein_coding retained_intron MGP_CBAJ_T0088191.1 MGP_CBAJ_G0033219.1 mouse_genomes_project 8 42480891 42499884 - MGP_CBAJ_P0088191 Cnot7 protein_coding protein_coding MGP_CBAJ_T0088192.1 MGP_CBAJ_G0033219.1 mouse_genomes_project 8 42481381 42499469 - MGP_CBAJ_P0088192 Cnot7 protein_coding protein_coding MGP_CBAJ_T0088193.1 MGP_CBAJ_G0033219.1 mouse_genomes_project 8 42482359 42489278 - Cnot7 protein_coding processed_transcript MGP_CBAJ_T0088194.1 MGP_CBAJ_G0033219.1 mouse_genomes_project 8 42483968 42495869 - Cnot7 protein_coding retained_intron MGP_CBAJ_T0088196.1 MGP_CBAJ_G0033219.1 mouse_genomes_project 8 42488938 42495786 - Cnot7 protein_coding processed_transcript MGP_CBAJ_T0088197.1 MGP_CBAJ_G0033219.1 mouse_genomes_project 8 42495518 42499888 - Cnot7 protein_coding processed_transcript MGP_CBAJ_T0088198.1 MGP_CBAJ_G0033219.1 mouse_genomes_project 8 42498187 42504003 - Cnot7 protein_coding processed_transcript MGP_CBAJ_T0088199.1 MGP_CBAJ_G0033219.1 mouse_genomes_project 8 42498267 42499469 - Cnot7 protein_coding processed_transcript MGP_CBAJ_T0099553.1 MGP_CBAJ_G0037808.1 mouse_genomes_project 8 70665253 70665360 - Gm23515 snRNA snRNA MGP_CBAJ_T0090311.1 MGP_CBAJ_G0033882.1 mouse_genomes_project 8 134951638 134959808 - MGP_CBAJ_P0090311 Cyba protein_coding protein_coding MGP_CBAJ_T0087820.1 MGP_CBAJ_G0033070.1 mouse_genomes_project 8 17300746 17531046 + MGP_CBAJ_P0087820 Mcph1 protein_coding protein_coding MGP_CBAJ_T0087821.1 MGP_CBAJ_G0033070.1 mouse_genomes_project 8 17300779 17430104 + MGP_CBAJ_P0087821 Mcph1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087822.1 MGP_CBAJ_G0033070.1 mouse_genomes_project 8 17301193 17404092 + Mcph1 protein_coding retained_intron MGP_CBAJ_T0087823.1 MGP_CBAJ_G0033070.1 mouse_genomes_project 8 17301199 17341478 + MGP_CBAJ_P0087823 Mcph1 protein_coding protein_coding MGP_CBAJ_T0087824.1 MGP_CBAJ_G0033070.1 mouse_genomes_project 8 17332740 17340457 + MGP_CBAJ_P0087824 Mcph1 protein_coding protein_coding MGP_CBAJ_T0087825.1 MGP_CBAJ_G0033070.1 mouse_genomes_project 8 17341168 17364748 + MGP_CBAJ_P0087825 Mcph1 protein_coding protein_coding MGP_CBAJ_T0009019.1 MGP_CBAJ_G0007245.1 mouse_genomes_project 8 88636071 88637269 - 4930579O11Rik lincRNA lincRNA MGP_CBAJ_T0009020.1 MGP_CBAJ_G0007245.1 mouse_genomes_project 8 88636099 88637315 - 4930579O11Rik lincRNA lincRNA MGP_CBAJ_T0005248.1 MGP_CBAJ_G0004445.1 mouse_genomes_project 8 10981961 11004291 - Gm15347 antisense antisense MGP_CBAJ_T0008968.1 MGP_CBAJ_G0007203.1 mouse_genomes_project 8 9709196 9721273 + 1700128E19Rik lincRNA lincRNA MGP_CBAJ_T0015741.1 MGP_CBAJ_G0013853.1 mouse_genomes_project 8 42893583 42897967 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0088033.1 MGP_CBAJ_G0033155.1 mouse_genomes_project 8 25824904 25859006 - MGP_CBAJ_P0088033 Ash2l protein_coding protein_coding MGP_CBAJ_T0088034.1 MGP_CBAJ_G0033155.1 mouse_genomes_project 8 25825238 25858989 - MGP_CBAJ_P0088034 Ash2l protein_coding nonsense_mediated_decay MGP_CBAJ_T0088035.1 MGP_CBAJ_G0033155.1 mouse_genomes_project 8 25825584 25858996 - MGP_CBAJ_P0088035 Ash2l protein_coding nonsense_mediated_decay MGP_CBAJ_T0088036.1 MGP_CBAJ_G0033155.1 mouse_genomes_project 8 25826114 25858984 - MGP_CBAJ_P0088036 Ash2l protein_coding protein_coding MGP_CBAJ_T0088037.1 MGP_CBAJ_G0033155.1 mouse_genomes_project 8 25831449 25832276 - Ash2l protein_coding retained_intron MGP_CBAJ_T0088038.1 MGP_CBAJ_G0033155.1 mouse_genomes_project 8 25831844 25841683 - Ash2l protein_coding retained_intron MGP_CBAJ_T0088039.1 MGP_CBAJ_G0033155.1 mouse_genomes_project 8 25835693 25841139 - Ash2l protein_coding processed_transcript MGP_CBAJ_T0015770.1 MGP_CBAJ_G0013882.1 mouse_genomes_project 8 92434386 92434611 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0090534.1 MGP_CBAJ_G0033954.1 mouse_genomes_project 8 140134749 140152073 - MGP_CBAJ_P0090534 Tomm20 protein_coding protein_coding MGP_CBAJ_T0088080.1 MGP_CBAJ_G0033174.1 mouse_genomes_project 8 27676386 27687120 - MGP_CBAJ_P0088080 Chrna6 protein_coding protein_coding MGP_CBAJ_T0100785.1 MGP_CBAJ_G0039040.1 mouse_genomes_project 8 16931529 16931639 - Gm25665 snoRNA snoRNA MGP_CBAJ_T0088302.1 MGP_CBAJ_G0033249.1 mouse_genomes_project 8 48676615 48679581 - MGP_CBAJ_P0088302 Ankrd37 protein_coding protein_coding MGP_CBAJ_T0088303.1 MGP_CBAJ_G0033249.1 mouse_genomes_project 8 48676624 48679581 - Ankrd37 protein_coding processed_transcript MGP_CBAJ_T0088304.1 MGP_CBAJ_G0033249.1 mouse_genomes_project 8 48676627 48679280 - Ankrd37 protein_coding retained_intron MGP_CBAJ_T0088305.1 MGP_CBAJ_G0033249.1 mouse_genomes_project 8 48676678 48677582 - Ankrd37 protein_coding processed_transcript MGP_CBAJ_T0088306.1 MGP_CBAJ_G0033249.1 mouse_genomes_project 8 48677845 48679563 - Ankrd37 protein_coding retained_intron MGP_CBAJ_T0090106.1 MGP_CBAJ_G0033828.1 mouse_genomes_project 8 128678883 128774891 - MGP_CBAJ_P0090106 Pkd1l2 protein_coding protein_coding MGP_CBAJ_T0090107.1 MGP_CBAJ_G0033828.1 mouse_genomes_project 8 128678883 128774891 - MGP_CBAJ_P0090107 Pkd1l2 protein_coding protein_coding MGP_CBAJ_T0090108.1 MGP_CBAJ_G0033828.1 mouse_genomes_project 8 128690533 128711519 - Pkd1l2 protein_coding retained_intron MGP_CBAJ_T0090109.1 MGP_CBAJ_G0033828.1 mouse_genomes_project 8 128710973 128718600 - Pkd1l2 protein_coding retained_intron MGP_CBAJ_T0088550.1 MGP_CBAJ_G0033324.1 mouse_genomes_project 8 72796312 72821648 + MGP_CBAJ_P0088550 Nat3 protein_coding protein_coding MGP_CBAJ_T0088320.1 MGP_CBAJ_G0033252.1 mouse_genomes_project 8 48860601 48899188 + MGP_CBAJ_P0088320 Cfap97 protein_coding protein_coding MGP_CBAJ_T0088321.1 MGP_CBAJ_G0033252.1 mouse_genomes_project 8 48860685 48899184 + MGP_CBAJ_P0088321 Cfap97 protein_coding protein_coding MGP_CBAJ_T0088322.1 MGP_CBAJ_G0033252.1 mouse_genomes_project 8 48868220 48899186 + MGP_CBAJ_P0088322 Cfap97 protein_coding protein_coding MGP_CBAJ_T0088641.1 MGP_CBAJ_G0033349.1 mouse_genomes_project 8 75429209 75437355 - MGP_CBAJ_P0088641 Ndufa13 protein_coding protein_coding MGP_CBAJ_T0090020.1 MGP_CBAJ_G0033797.1 mouse_genomes_project 8 122143436 122164678 - Fa2h protein_coding processed_transcript MGP_CBAJ_T0090021.1 MGP_CBAJ_G0033797.1 mouse_genomes_project 8 122143442 122197101 - MGP_CBAJ_P0090021 Fa2h protein_coding protein_coding MGP_CBAJ_T0090022.1 MGP_CBAJ_G0033797.1 mouse_genomes_project 8 122144066 122146359 - Fa2h protein_coding processed_transcript MGP_CBAJ_T0090023.1 MGP_CBAJ_G0033797.1 mouse_genomes_project 8 122145771 122197095 - Fa2h protein_coding retained_intron MGP_CBAJ_T0089662.1 MGP_CBAJ_G0033663.1 mouse_genomes_project 8 113898420 113914025 + MGP_CBAJ_P0089662 Cklf protein_coding protein_coding MGP_CBAJ_T0089663.1 MGP_CBAJ_G0033663.1 mouse_genomes_project 8 113898449 113919088 + MGP_CBAJ_P0089663 Cklf protein_coding protein_coding MGP_CBAJ_T0090476.1 MGP_CBAJ_G0033931.1 mouse_genomes_project 8 137484742 137517589 - MGP_CBAJ_P0090476 2310022B05Rik protein_coding protein_coding MGP_CBAJ_T0090295.1 MGP_CBAJ_G0033878.1 mouse_genomes_project 8 134803266 134861265 + MGP_CBAJ_P0090295 Zfpm1 protein_coding protein_coding MGP_CBAJ_T0090296.1 MGP_CBAJ_G0033878.1 mouse_genomes_project 8 134831554 134848010 + Zfpm1 protein_coding processed_transcript MGP_CBAJ_T0090297.1 MGP_CBAJ_G0033878.1 mouse_genomes_project 8 134857711 134859043 + Zfpm1 protein_coding processed_transcript MGP_CBAJ_T0090298.1 MGP_CBAJ_G0033878.1 mouse_genomes_project 8 134857799 134859775 + MGP_CBAJ_P0090298 Zfpm1 protein_coding protein_coding MGP_CBAJ_T0090148.1 MGP_CBAJ_G0033844.1 mouse_genomes_project 8 131638624 131668345 + MGP_CBAJ_P0090148 Dnaaf1 protein_coding protein_coding MGP_CBAJ_T0087828.1 MGP_CBAJ_G0033072.1 mouse_genomes_project 8 17579216 17617831 + MGP_CBAJ_P0087828 Agpat5 protein_coding protein_coding MGP_CBAJ_T0087829.1 MGP_CBAJ_G0033072.1 mouse_genomes_project 8 17579497 17616366 + MGP_CBAJ_P0087829 Agpat5 protein_coding unknown_likely_coding MGP_CBAJ_T0015752.1 MGP_CBAJ_G0013864.1 mouse_genomes_project 8 74213180 74213805 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0018237.1 MGP_CBAJ_G0015469.1 mouse_genomes_project 8 137708866 137740524 + Gm16163 processed_transcript processed_transcript MGP_CBAJ_T0098102.1 MGP_CBAJ_G0036375.1 mouse_genomes_project 8 47113410 47113517 + Gm26089 rRNA rRNA MGP_CBAJ_T0088099.1 MGP_CBAJ_G0033185.1 mouse_genomes_project 8 32767279 32835485 - MGP_CBAJ_P0088099 unknown_likely_coding unknown_likely_coding MGP_CBAJ_T0088073.1 MGP_CBAJ_G0033169.1 mouse_genomes_project 8 27414167 27419242 - MGP_CBAJ_P0088073 Got1l1 protein_coding protein_coding MGP_CBAJ_T0087620.1 MGP_CBAJ_G0033009.1 mouse_genomes_project 8 6210410 6265324 - MGP_CBAJ_P0087620 Efnb2 protein_coding protein_coding MGP_CBAJ_T0087621.1 MGP_CBAJ_G0033009.1 mouse_genomes_project 8 6213573 6236482 - MGP_CBAJ_P0087621 Efnb2 protein_coding protein_coding MGP_CBAJ_T0005296.1 MGP_CBAJ_G0004483.1 mouse_genomes_project 8 107884977 107910891 + Gm15679 antisense antisense MGP_CBAJ_T0087614.1 MGP_CBAJ_G0033004.1 mouse_genomes_project 8 1708260 1724146 + MGP_CBAJ_P0087614 Zfp958 protein_coding protein_coding MGP_CBAJ_T0087615.1 MGP_CBAJ_G0033004.1 mouse_genomes_project 8 1720436 1723977 + MGP_CBAJ_P0087615 Zfp958 protein_coding protein_coding MGP_CBAJ_T0087748.1 MGP_CBAJ_G0033049.1 mouse_genomes_project 8 11665465 11695014 - MGP_CBAJ_P0087748 Gas6 protein_coding protein_coding MGP_CBAJ_T0010884.1 MGP_CBAJ_G0009022.1 mouse_genomes_project 8 117706775 117706845 + Mir140 miRNA miRNA MGP_CBAJ_T0087536.1 MGP_CBAJ_G0032983.1 mouse_genomes_project 8 663532 667892 + MGP_CBAJ_P0087536 Retn protein_coding protein_coding MGP_CBAJ_T0087537.1 MGP_CBAJ_G0032983.1 mouse_genomes_project 8 663532 665859 + MGP_CBAJ_P0087537 Retn protein_coding protein_coding MGP_CBAJ_T0088154.1 MGP_CBAJ_G0033208.1 mouse_genomes_project 8 37448123 37501148 + MGP_CBAJ_P0088154 D8Ertd82e protein_coding protein_coding MGP_CBAJ_T0088155.1 MGP_CBAJ_G0033208.1 mouse_genomes_project 8 37448156 37459891 + D8Ertd82e protein_coding retained_intron MGP_CBAJ_T0088156.1 MGP_CBAJ_G0033208.1 mouse_genomes_project 8 37448156 37456028 + D8Ertd82e protein_coding retained_intron MGP_CBAJ_T0088859.1 MGP_CBAJ_G0033410.1 mouse_genomes_project 8 77149419 77162860 + MGP_CBAJ_P0088859 Babam1 protein_coding protein_coding MGP_CBAJ_T0090488.1 MGP_CBAJ_G0033934.1 mouse_genomes_project 8 137602498 137613902 - MGP_CBAJ_P0090488 Fam89a protein_coding protein_coding MGP_CBAJ_T0088028.1 MGP_CBAJ_G0033150.1 mouse_genomes_project 8 25726134 25760404 - MGP_CBAJ_P0088028 Ddhd2 protein_coding protein_coding MGP_CBAJ_T0090015.1 MGP_CBAJ_G0033796.1 mouse_genomes_project 8 122101513 122136479 - MGP_CBAJ_P0090015 Mlkl protein_coding protein_coding MGP_CBAJ_T0090016.1 MGP_CBAJ_G0033796.1 mouse_genomes_project 8 122101516 122136479 - MGP_CBAJ_P0090016 Mlkl protein_coding protein_coding MGP_CBAJ_T0090017.1 MGP_CBAJ_G0033796.1 mouse_genomes_project 8 122101518 122109161 - Mlkl protein_coding processed_transcript MGP_CBAJ_T0090018.1 MGP_CBAJ_G0033796.1 mouse_genomes_project 8 122101741 122136203 - MGP_CBAJ_P0090018 Mlkl protein_coding unknown_likely_coding MGP_CBAJ_T0090019.1 MGP_CBAJ_G0033796.1 mouse_genomes_project 8 122130119 122136095 - MGP_CBAJ_P0090019 Mlkl protein_coding protein_coding MGP_CBAJ_T0011585.1 MGP_CBAJ_G0009723.1 mouse_genomes_project 8 9691761 9692005 - Gm27854 misc_RNA misc_RNA MGP_CBAJ_T0005264.1 MGP_CBAJ_G0004456.1 mouse_genomes_project 8 26135704 26156967 + 1700047A11Rik antisense antisense MGP_CBAJ_T0005265.1 MGP_CBAJ_G0004456.1 mouse_genomes_project 8 26135711 26142371 + 1700047A11Rik antisense antisense MGP_CBAJ_T0009017.1 MGP_CBAJ_G0007243.1 mouse_genomes_project 8 87816340 87821578 - Gm27048 lincRNA lincRNA MGP_CBAJ_T0088591.1 MGP_CBAJ_G0033332.1 mouse_genomes_project 8 74569768 74624126 - MGP_CBAJ_P0088591 Lzts1 protein_coding protein_coding MGP_CBAJ_T0088592.1 MGP_CBAJ_G0033332.1 mouse_genomes_project 8 74572600 74578058 - MGP_CBAJ_P0088592 Lzts1 protein_coding protein_coding MGP_CBAJ_T0088593.1 MGP_CBAJ_G0033332.1 mouse_genomes_project 8 74605770 74624116 - Lzts1 protein_coding processed_transcript MGP_CBAJ_T0088594.1 MGP_CBAJ_G0033332.1 mouse_genomes_project 8 74622042 74624106 - Lzts1 protein_coding processed_transcript MGP_CBAJ_T0088595.1 MGP_CBAJ_G0033332.1 mouse_genomes_project 8 74623612 74624090 - Lzts1 protein_coding retained_intron MGP_CBAJ_T0009043.1 MGP_CBAJ_G0007261.1 mouse_genomes_project 8 94988461 94989646 - 1700120C18Rik lincRNA lincRNA MGP_CBAJ_T0090446.1 MGP_CBAJ_G0033918.1 mouse_genomes_project 8 136532700 136565488 + MGP_CBAJ_P0090446 Rab4a protein_coding protein_coding MGP_CBAJ_T0090447.1 MGP_CBAJ_G0033918.1 mouse_genomes_project 8 136532783 136564686 + MGP_CBAJ_P0090447 Rab4a protein_coding protein_coding MGP_CBAJ_T0088816.1 MGP_CBAJ_G0033399.1 mouse_genomes_project 8 76518462 76525803 - MGP_CBAJ_P0088816 Ccdc124 protein_coding protein_coding MGP_CBAJ_T0002300.1 MGP_CBAJ_G0002213.1 mouse_genomes_project 8 119064144 119069352 + TEC TEC MGP_CBAJ_T0010890.1 MGP_CBAJ_G0009028.1 mouse_genomes_project 8 121944463 121944545 + Gm23193 miRNA miRNA MGP_CBAJ_T0088821.1 MGP_CBAJ_G0033404.1 mouse_genomes_project 8 76978258 77013881 - MGP_CBAJ_P0088821 Haus8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088822.1 MGP_CBAJ_G0033404.1 mouse_genomes_project 8 76981064 77014354 - MGP_CBAJ_P0088822 Haus8 protein_coding protein_coding MGP_CBAJ_T0088823.1 MGP_CBAJ_G0033404.1 mouse_genomes_project 8 76981064 77013797 - MGP_CBAJ_P0088823 Haus8 protein_coding protein_coding MGP_CBAJ_T0088824.1 MGP_CBAJ_G0033404.1 mouse_genomes_project 8 76985372 77013881 - Haus8 protein_coding processed_transcript MGP_CBAJ_T0088825.1 MGP_CBAJ_G0033404.1 mouse_genomes_project 8 76985967 76986583 - Haus8 protein_coding retained_intron MGP_CBAJ_T0088826.1 MGP_CBAJ_G0033404.1 mouse_genomes_project 8 76985994 77013899 - Haus8 protein_coding processed_transcript MGP_CBAJ_T0088827.1 MGP_CBAJ_G0033404.1 mouse_genomes_project 8 76986967 77013863 - Haus8 protein_coding retained_intron MGP_CBAJ_T0088828.1 MGP_CBAJ_G0033404.1 mouse_genomes_project 8 76996840 77013779 - Haus8 protein_coding processed_transcript MGP_CBAJ_T0087619.1 MGP_CBAJ_G0033008.1 mouse_genomes_project 8 2837993 2839314 + MGP_CBAJ_P0087619 protein_coding protein_coding MGP_CBAJ_T0009006.1 MGP_CBAJ_G0007234.1 mouse_genomes_project 8 73443165 73467238 - lincRNA lincRNA MGP_CBAJ_T0009007.1 MGP_CBAJ_G0007234.1 mouse_genomes_project 8 73466275 73467452 - lincRNA lincRNA MGP_CBAJ_T0088511.1 MGP_CBAJ_G0033309.1 mouse_genomes_project 8 69661221 69679856 - MGP_CBAJ_P0088511 Msmo1 protein_coding protein_coding MGP_CBAJ_T0088512.1 MGP_CBAJ_G0033309.1 mouse_genomes_project 8 69661291 69679645 - Msmo1 protein_coding processed_transcript MGP_CBAJ_T0088513.1 MGP_CBAJ_G0033309.1 mouse_genomes_project 8 69661309 69679642 - Msmo1 protein_coding retained_intron MGP_CBAJ_T0088514.1 MGP_CBAJ_G0033309.1 mouse_genomes_project 8 69661707 69665066 - Msmo1 protein_coding processed_transcript MGP_CBAJ_T0088515.1 MGP_CBAJ_G0033309.1 mouse_genomes_project 8 69666875 69677148 - MGP_CBAJ_P0088515 Msmo1 protein_coding protein_coding MGP_CBAJ_T0088516.1 MGP_CBAJ_G0033309.1 mouse_genomes_project 8 69668195 69679612 - Msmo1 protein_coding retained_intron MGP_CBAJ_T0088517.1 MGP_CBAJ_G0033309.1 mouse_genomes_project 8 69673795 69679612 - MGP_CBAJ_P0088517 Msmo1 protein_coding protein_coding MGP_CBAJ_T0090341.1 MGP_CBAJ_G0033893.1 mouse_genomes_project 8 135194071 135283087 - MGP_CBAJ_P0090341 Cbfa2t3 protein_coding protein_coding MGP_CBAJ_T0090342.1 MGP_CBAJ_G0033893.1 mouse_genomes_project 8 135194795 135253029 - MGP_CBAJ_P0090342 Cbfa2t3 protein_coding protein_coding MGP_CBAJ_T0090343.1 MGP_CBAJ_G0033893.1 mouse_genomes_project 8 135195270 135253132 - MGP_CBAJ_P0090343 Cbfa2t3 protein_coding protein_coding MGP_CBAJ_T0090344.1 MGP_CBAJ_G0033893.1 mouse_genomes_project 8 135209649 135253651 - MGP_CBAJ_P0090344 Cbfa2t3 protein_coding protein_coding MGP_CBAJ_T0090345.1 MGP_CBAJ_G0033893.1 mouse_genomes_project 8 135209653 135218401 - Cbfa2t3 protein_coding processed_transcript MGP_CBAJ_T0090346.1 MGP_CBAJ_G0033893.1 mouse_genomes_project 8 135213639 135253068 - Cbfa2t3 protein_coding processed_transcript MGP_CBAJ_T0090347.1 MGP_CBAJ_G0033893.1 mouse_genomes_project 8 135221958 135282880 - Cbfa2t3 protein_coding retained_intron MGP_CBAJ_T0011600.1 MGP_CBAJ_G0009738.1 mouse_genomes_project 8 115999447 115999707 - Gm27956 misc_RNA misc_RNA MGP_CBAJ_T0089239.1 MGP_CBAJ_G0033534.1 mouse_genomes_project 8 92080861 92084912 - MGP_CBAJ_P0089239 Rad23a protein_coding protein_coding MGP_CBAJ_T0089240.1 MGP_CBAJ_G0033534.1 mouse_genomes_project 8 92081494 92087507 - MGP_CBAJ_P0089240 Rad23a protein_coding protein_coding MGP_CBAJ_T0089241.1 MGP_CBAJ_G0033534.1 mouse_genomes_project 8 92081752 92087531 - MGP_CBAJ_P0089241 Rad23a protein_coding protein_coding MGP_CBAJ_T0089242.1 MGP_CBAJ_G0033534.1 mouse_genomes_project 8 92082484 92087531 - MGP_CBAJ_P0089242 Rad23a protein_coding protein_coding MGP_CBAJ_T0089243.1 MGP_CBAJ_G0033534.1 mouse_genomes_project 8 92084586 92085531 - Rad23a protein_coding retained_intron MGP_CBAJ_T0089244.1 MGP_CBAJ_G0033534.1 mouse_genomes_project 8 92084599 92085545 - Rad23a protein_coding retained_intron MGP_CBAJ_T0089245.1 MGP_CBAJ_G0033534.1 mouse_genomes_project 8 92085163 92087502 - Rad23a protein_coding retained_intron MGP_CBAJ_T0089261.1 MGP_CBAJ_G0033539.1 mouse_genomes_project 8 92133534 92140719 - MGP_CBAJ_P0089261 Gcdh protein_coding protein_coding MGP_CBAJ_T0089262.1 MGP_CBAJ_G0033539.1 mouse_genomes_project 8 92133548 92140967 - MGP_CBAJ_P0089262 Gcdh protein_coding protein_coding MGP_CBAJ_T0089263.1 MGP_CBAJ_G0033539.1 mouse_genomes_project 8 92137783 92140335 - Gcdh protein_coding retained_intron MGP_CBAJ_T0089264.1 MGP_CBAJ_G0033539.1 mouse_genomes_project 8 92137982 92139717 - Gcdh protein_coding retained_intron MGP_CBAJ_T0089265.1 MGP_CBAJ_G0033539.1 mouse_genomes_project 8 92139701 92140525 - Gcdh protein_coding retained_intron MGP_CBAJ_T0089266.1 MGP_CBAJ_G0033539.1 mouse_genomes_project 8 92140144 92140971 - MGP_CBAJ_P0089266 Gcdh protein_coding protein_coding MGP_CBAJ_T0099576.1 MGP_CBAJ_G0037831.1 mouse_genomes_project 8 124706935 124707097 - Gm24291 snRNA snRNA MGP_CBAJ_T0015732.1 MGP_CBAJ_G0013844.1 mouse_genomes_project 8 22769240 22769495 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100784.1 MGP_CBAJ_G0039039.1 mouse_genomes_project 8 15392812 15392932 + Gm25278 snoRNA snoRNA MGP_CBAJ_T0098463.1 MGP_CBAJ_G0036724.1 mouse_genomes_project 8 73106641 73107031 - sense_intronic sense_intronic MGP_CBAJ_T0089852.1 MGP_CBAJ_G0033740.1 mouse_genomes_project 8 116208484 116300974 - MGP_CBAJ_P0089852 Smpd3 protein_coding protein_coding MGP_CBAJ_T0099548.1 MGP_CBAJ_G0037803.1 mouse_genomes_project 8 55508305 55508444 + Gm24929 snRNA snRNA MGP_CBAJ_T0015786.1 MGP_CBAJ_G0013898.1 mouse_genomes_project 8 134012491 134013634 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0088294.1 MGP_CBAJ_G0033247.1 mouse_genomes_project 8 48620534 48648157 - MGP_CBAJ_P0088294 1700029J07Rik protein_coding protein_coding MGP_CBAJ_T0088295.1 MGP_CBAJ_G0033247.1 mouse_genomes_project 8 48620536 48648157 - MGP_CBAJ_P0088295 1700029J07Rik protein_coding protein_coding MGP_CBAJ_T0088079.1 MGP_CBAJ_G0033173.1 mouse_genomes_project 8 27640382 27670165 + MGP_CBAJ_P0088079 Chrnb3 protein_coding protein_coding MGP_CBAJ_T0089392.1 MGP_CBAJ_G0033576.1 mouse_genomes_project 8 95173278 95424315 - MGP_CBAJ_P0089392 Zfp423 protein_coding protein_coding MGP_CBAJ_T0089393.1 MGP_CBAJ_G0033576.1 mouse_genomes_project 8 95173417 95490404 - MGP_CBAJ_P0089393 Zfp423 protein_coding protein_coding MGP_CBAJ_T0089394.1 MGP_CBAJ_G0033576.1 mouse_genomes_project 8 95295561 95485099 - MGP_CBAJ_P0089394 Zfp423 protein_coding protein_coding MGP_CBAJ_T0089395.1 MGP_CBAJ_G0033576.1 mouse_genomes_project 8 95295716 95316132 - MGP_CBAJ_P0089395 Zfp423 protein_coding protein_coding MGP_CBAJ_T0089396.1 MGP_CBAJ_G0033576.1 mouse_genomes_project 8 95295885 95475278 - Zfp423 protein_coding processed_transcript MGP_CBAJ_T0089397.1 MGP_CBAJ_G0033576.1 mouse_genomes_project 8 95295902 95479957 - Zfp423 protein_coding processed_transcript MGP_CBAJ_T0010870.1 MGP_CBAJ_G0009008.1 mouse_genomes_project 8 95700070 95700146 + Mir7071 miRNA miRNA MGP_CBAJ_T0088007.1 MGP_CBAJ_G0033147.1 mouse_genomes_project 8 25547579 25572941 - MGP_CBAJ_P0088007 Letm2 protein_coding unknown_likely_coding MGP_CBAJ_T0089795.1 MGP_CBAJ_G0033718.1 mouse_genomes_project 8 115639301 115712842 - MGP_CBAJ_P0089795 Ranbp10 protein_coding protein_coding MGP_CBAJ_T0090046.1 MGP_CBAJ_G0033803.1 mouse_genomes_project 8 122603301 122624740 - MGP_CBAJ_P0090046 Bcar1 protein_coding unknown_likely_coding MGP_CBAJ_T0090047.1 MGP_CBAJ_G0033803.1 mouse_genomes_project 8 122603318 122636540 - MGP_CBAJ_P0090047 Bcar1 protein_coding protein_coding MGP_CBAJ_T0005302.1 MGP_CBAJ_G0004487.1 mouse_genomes_project 8 115836687 115848198 + Gm16156 antisense antisense MGP_CBAJ_T0015753.1 MGP_CBAJ_G0013865.1 mouse_genomes_project 8 78395302 78395705 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015738.1 MGP_CBAJ_G0013850.1 mouse_genomes_project 8 37366789 37370299 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099541.1 MGP_CBAJ_G0037796.1 mouse_genomes_project 8 33043758 33043878 + Gm22140 snRNA snRNA MGP_CBAJ_T0087981.1 MGP_CBAJ_G0033141.1 mouse_genomes_project 8 24811980 24877837 - MGP_CBAJ_P0087981 Adam9 protein_coding protein_coding MGP_CBAJ_T0088098.1 MGP_CBAJ_G0033184.1 mouse_genomes_project 8 32622462 32733959 - MGP_CBAJ_P0088098 Nrg1 protein_coding protein_coding MGP_CBAJ_T0015766.1 MGP_CBAJ_G0013878.1 mouse_genomes_project 8 88816509 88818123 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100815.1 MGP_CBAJ_G0039070.1 mouse_genomes_project 8 75677576 75677702 - Gm25906 snoRNA snoRNA MGP_CBAJ_T0102227.1 MGP_CBAJ_G0040256.1 mouse_genomes_project 8 18405360 18407240 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0089913.1 MGP_CBAJ_G0033760.1 mouse_genomes_project 8 117587570 117717406 + MGP_CBAJ_P0089913 Wwp2 protein_coding protein_coding MGP_CBAJ_T0088094.1 MGP_CBAJ_G0033182.1 mouse_genomes_project 8 31896074 31976983 + MGP_CBAJ_P0088094 Fut10 protein_coding protein_coding MGP_CBAJ_T0088095.1 MGP_CBAJ_G0033182.1 mouse_genomes_project 8 31896078 31947915 + MGP_CBAJ_P0088095 Fut10 protein_coding protein_coding MGP_CBAJ_T0088096.1 MGP_CBAJ_G0033182.1 mouse_genomes_project 8 31912197 31946148 + Fut10 protein_coding processed_transcript MGP_CBAJ_T0090434.1 MGP_CBAJ_G0033914.1 mouse_genomes_project 8 136150446 136191299 + MGP_CBAJ_P0090434 Afg3l1 protein_coding protein_coding MGP_CBAJ_T0090435.1 MGP_CBAJ_G0033914.1 mouse_genomes_project 8 136150446 136191299 + MGP_CBAJ_P0090435 Afg3l1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090436.1 MGP_CBAJ_G0033914.1 mouse_genomes_project 8 136150483 136156546 + Afg3l1 protein_coding retained_intron MGP_CBAJ_T0090437.1 MGP_CBAJ_G0033914.1 mouse_genomes_project 8 136155618 136173318 + Afg3l1 protein_coding processed_transcript MGP_CBAJ_T0090438.1 MGP_CBAJ_G0033914.1 mouse_genomes_project 8 136180349 136186323 + Afg3l1 protein_coding retained_intron MGP_CBAJ_T0090439.1 MGP_CBAJ_G0033914.1 mouse_genomes_project 8 136188467 136188997 + Afg3l1 protein_coding retained_intron MGP_CBAJ_T0090422.1 MGP_CBAJ_G0033910.1 mouse_genomes_project 8 136047535 136080980 + MGP_CBAJ_P0090422 Tcf25 protein_coding protein_coding MGP_CBAJ_T0090423.1 MGP_CBAJ_G0033910.1 mouse_genomes_project 8 136047546 136083262 + MGP_CBAJ_P0090423 Tcf25 protein_coding protein_coding MGP_CBAJ_T0088522.1 MGP_CBAJ_G0033313.1 mouse_genomes_project 8 69953649 69973518 - MGP_CBAJ_P0088522 Trim60 protein_coding protein_coding MGP_CBAJ_T0090565.1 MGP_CBAJ_G0033958.1 mouse_genomes_project 8 142072059 142121410 + MGP_CBAJ_P0090565 Itgb1 protein_coding protein_coding MGP_CBAJ_T0090566.1 MGP_CBAJ_G0033958.1 mouse_genomes_project 8 142072162 142120826 + MGP_CBAJ_P0090566 Itgb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090567.1 MGP_CBAJ_G0033958.1 mouse_genomes_project 8 142072275 142098962 + Itgb1 protein_coding retained_intron MGP_CBAJ_T0090568.1 MGP_CBAJ_G0033958.1 mouse_genomes_project 8 142112546 142120598 + MGP_CBAJ_P0090568 Itgb1 protein_coding protein_coding MGP_CBAJ_T0008997.1 MGP_CBAJ_G0007225.1 mouse_genomes_project 8 48203920 48214339 - lincRNA lincRNA MGP_CBAJ_T0089413.1 MGP_CBAJ_G0033580.1 mouse_genomes_project 8 95856578 95924039 + MGP_CBAJ_P0089413 Adcy7 protein_coding protein_coding MGP_CBAJ_T0089414.1 MGP_CBAJ_G0033580.1 mouse_genomes_project 8 95870257 95924039 + MGP_CBAJ_P0089414 Adcy7 protein_coding protein_coding MGP_CBAJ_T0089415.1 MGP_CBAJ_G0033580.1 mouse_genomes_project 8 95876330 95924039 + MGP_CBAJ_P0089415 Adcy7 protein_coding protein_coding MGP_CBAJ_T0089416.1 MGP_CBAJ_G0033580.1 mouse_genomes_project 8 95881468 95924039 + MGP_CBAJ_P0089416 Adcy7 protein_coding protein_coding MGP_CBAJ_T0015735.1 MGP_CBAJ_G0013847.1 mouse_genomes_project 8 35396957 35397344 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0089309.1 MGP_CBAJ_G0033549.1 mouse_genomes_project 8 92274595 92281927 - MGP_CBAJ_P0089309 Asna1 protein_coding protein_coding MGP_CBAJ_T0088376.1 MGP_CBAJ_G0033272.1 mouse_genomes_project 8 51067338 51108398 + MGP_CBAJ_P0088376 Dctd protein_coding protein_coding MGP_CBAJ_T0088377.1 MGP_CBAJ_G0033272.1 mouse_genomes_project 8 51071235 51109448 + MGP_CBAJ_P0088377 Dctd protein_coding protein_coding MGP_CBAJ_T0088378.1 MGP_CBAJ_G0033272.1 mouse_genomes_project 8 51071290 51109446 + MGP_CBAJ_P0088378 Dctd protein_coding protein_coding MGP_CBAJ_T0088379.1 MGP_CBAJ_G0033272.1 mouse_genomes_project 8 51071439 51109446 + MGP_CBAJ_P0088379 Dctd protein_coding nonsense_mediated_decay MGP_CBAJ_T0088380.1 MGP_CBAJ_G0033272.1 mouse_genomes_project 8 51071442 51105476 + Dctd protein_coding retained_intron MGP_CBAJ_T0088381.1 MGP_CBAJ_G0033272.1 mouse_genomes_project 8 51071466 51106382 + Dctd protein_coding processed_transcript MGP_CBAJ_T0088382.1 MGP_CBAJ_G0033272.1 mouse_genomes_project 8 51071488 51120993 + MGP_CBAJ_P0088382 Dctd protein_coding protein_coding MGP_CBAJ_T0087760.1 MGP_CBAJ_G0033052.1 mouse_genomes_project 8 11933332 11964272 + MGP_CBAJ_P0087760 4932443I19Rik protein_coding protein_coding MGP_CBAJ_T0088242.1 MGP_CBAJ_G0033233.1 mouse_genomes_project 8 45876692 45885373 - MGP_CBAJ_P0088242 protein_coding protein_coding MGP_CBAJ_T0005261.1 MGP_CBAJ_G0004454.1 mouse_genomes_project 8 22400162 22403953 + 1700041G16Rik antisense antisense MGP_CBAJ_T0005262.1 MGP_CBAJ_G0004454.1 mouse_genomes_project 8 22402694 22403152 + 1700041G16Rik antisense antisense MGP_CBAJ_T0089971.1 MGP_CBAJ_G0033786.1 mouse_genomes_project 8 121482897 121519207 - MGP_CBAJ_P0089971 Sf3b3 protein_coding protein_coding MGP_CBAJ_T0089796.1 MGP_CBAJ_G0033719.1 mouse_genomes_project 8 115713235 115736434 + MGP_CBAJ_P0089796 Tsnaxip1 protein_coding protein_coding MGP_CBAJ_T0089725.1 MGP_CBAJ_G0033690.1 mouse_genomes_project 8 115070193 115076498 - MGP_CBAJ_P0089725 Tradd protein_coding protein_coding MGP_CBAJ_T0089726.1 MGP_CBAJ_G0033690.1 mouse_genomes_project 8 115071097 115072028 - Tradd protein_coding retained_intron MGP_CBAJ_T0089727.1 MGP_CBAJ_G0033690.1 mouse_genomes_project 8 115071190 115076470 - MGP_CBAJ_P0089727 Tradd protein_coding nonsense_mediated_decay MGP_CBAJ_T0089728.1 MGP_CBAJ_G0033690.1 mouse_genomes_project 8 115071664 115076492 - MGP_CBAJ_P0089728 Tradd protein_coding nonsense_mediated_decay MGP_CBAJ_T0088547.1 MGP_CBAJ_G0033322.1 mouse_genomes_project 8 72759917 72761264 + MGP_CBAJ_P0088547 Nat1 protein_coding protein_coding MGP_CBAJ_T0009031.1 MGP_CBAJ_G0007255.1 mouse_genomes_project 8 94673615 94769200 + Gm27169 lincRNA lincRNA MGP_CBAJ_T0089843.1 MGP_CBAJ_G0033737.1 mouse_genomes_project 8 116110708 116144425 + MGP_CBAJ_P0089843 Slc7a6 protein_coding protein_coding MGP_CBAJ_T0009002.1 MGP_CBAJ_G0007230.1 mouse_genomes_project 8 61536187 61560012 + 2500002B13Rik lincRNA lincRNA MGP_CBAJ_T0087651.1 MGP_CBAJ_G0033025.1 mouse_genomes_project 8 9646268 9670590 - MGP_CBAJ_P0087651 1700016D06Rik protein_coding protein_coding MGP_CBAJ_T0087652.1 MGP_CBAJ_G0033025.1 mouse_genomes_project 8 9646822 9654211 - 1700016D06Rik protein_coding processed_transcript MGP_CBAJ_T0087653.1 MGP_CBAJ_G0033025.1 mouse_genomes_project 8 9646823 9696999 - MGP_CBAJ_P0087653 1700016D06Rik protein_coding protein_coding MGP_CBAJ_T0087654.1 MGP_CBAJ_G0033025.1 mouse_genomes_project 8 9646824 9656080 - MGP_CBAJ_P0087654 1700016D06Rik protein_coding protein_coding MGP_CBAJ_T0090536.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140281064 140877400 + MGP_CBAJ_P0090536 Pard3 protein_coding protein_coding MGP_CBAJ_T0090537.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140281227 140687829 + MGP_CBAJ_P0090537 Pard3 protein_coding protein_coding MGP_CBAJ_T0090538.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140281227 140877715 + MGP_CBAJ_P0090538 Pard3 protein_coding protein_coding MGP_CBAJ_T0090539.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140281241 140657611 + MGP_CBAJ_P0090539 Pard3 protein_coding protein_coding MGP_CBAJ_T0090540.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140281269 140667215 + Pard3 protein_coding retained_intron MGP_CBAJ_T0090541.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140281416 140877400 + MGP_CBAJ_P0090541 Pard3 protein_coding protein_coding MGP_CBAJ_T0090542.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140281430 140622853 + MGP_CBAJ_P0090542 Pard3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090543.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140281430 140524825 + MGP_CBAJ_P0090543 Pard3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090544.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140281466 140876235 + MGP_CBAJ_P0090544 Pard3 protein_coding protein_coding MGP_CBAJ_T0090545.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140281466 140876235 + MGP_CBAJ_P0090545 Pard3 protein_coding protein_coding MGP_CBAJ_T0090546.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140281516 140734954 + MGP_CBAJ_P0090546 Pard3 protein_coding protein_coding MGP_CBAJ_T0090547.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140281516 140681780 + MGP_CBAJ_P0090547 Pard3 protein_coding protein_coding MGP_CBAJ_T0090548.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140281516 140681780 + MGP_CBAJ_P0090548 Pard3 protein_coding protein_coding MGP_CBAJ_T0090549.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140281516 140681780 + MGP_CBAJ_P0090549 Pard3 protein_coding protein_coding MGP_CBAJ_T0090550.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140281516 140877400 + MGP_CBAJ_P0090550 Pard3 protein_coding protein_coding MGP_CBAJ_T0090551.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140281518 140681711 + MGP_CBAJ_P0090551 Pard3 protein_coding protein_coding MGP_CBAJ_T0090552.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140290420 140681711 + MGP_CBAJ_P0090552 Pard3 protein_coding protein_coding MGP_CBAJ_T0090553.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140549715 140657611 + MGP_CBAJ_P0090553 Pard3 protein_coding protein_coding MGP_CBAJ_T0090554.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140549742 140688148 + MGP_CBAJ_P0090554 Pard3 protein_coding protein_coding MGP_CBAJ_T0090555.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140556441 140657094 + MGP_CBAJ_P0090555 Pard3 protein_coding protein_coding MGP_CBAJ_T0090556.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140609038 140614415 + Pard3 protein_coding retained_intron MGP_CBAJ_T0090557.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140609934 140653705 + MGP_CBAJ_P0090557 Pard3 protein_coding protein_coding MGP_CBAJ_T0090558.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140623970 140629449 + Pard3 protein_coding retained_intron MGP_CBAJ_T0090559.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140641811 140655712 + MGP_CBAJ_P0090559 Pard3 protein_coding protein_coding MGP_CBAJ_T0090560.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140660455 140688145 + MGP_CBAJ_P0090560 Pard3 protein_coding protein_coding MGP_CBAJ_T0090561.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140665663 140734845 + Pard3 protein_coding retained_intron MGP_CBAJ_T0090562.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140702758 140734861 + MGP_CBAJ_P0090562 Pard3 protein_coding protein_coding MGP_CBAJ_T0090563.1 MGP_CBAJ_G0033956.1 mouse_genomes_project 8 140845176 140876278 + Pard3 protein_coding processed_transcript MGP_CBAJ_T0089533.1 MGP_CBAJ_G0033620.1 mouse_genomes_project 8 102528615 102565637 + MGP_CBAJ_P0089533 Slc12a3 protein_coding protein_coding MGP_CBAJ_T0089478.1 MGP_CBAJ_G0033601.1 mouse_genomes_project 8 101068542 101095376 - MGP_CBAJ_P0089478 Ces1a protein_coding protein_coding MGP_CBAJ_T0090424.1 MGP_CBAJ_G0033911.1 mouse_genomes_project 8 136086194 136093030 + MGP_CBAJ_P0090424 Mc1r protein_coding protein_coding MGP_CBAJ_T0100787.1 MGP_CBAJ_G0039042.1 mouse_genomes_project 8 17321185 17321314 - Gm25763 snoRNA snoRNA MGP_CBAJ_T0089739.1 MGP_CBAJ_G0033695.1 mouse_genomes_project 8 115101634 115107809 - MGP_CBAJ_P0089739 Exoc3l protein_coding protein_coding MGP_CBAJ_T0009076.1 MGP_CBAJ_G0007281.1 mouse_genomes_project 8 120843749 120845964 - Gm26832 lincRNA lincRNA MGP_CBAJ_T0005268.1 MGP_CBAJ_G0004458.1 mouse_genomes_project 8 34834809 34854603 + Gm26632 antisense antisense MGP_CBAJ_T0087835.1 MGP_CBAJ_G0033074.1 mouse_genomes_project 8 17742185 17745499 - MGP_CBAJ_P0087835 Defb40 protein_coding protein_coding MGP_CBAJ_T0087505.1 MGP_CBAJ_G0032978.1 mouse_genomes_project 8 579569 610794 + MGP_CBAJ_P0087505 Camsap3 protein_coding protein_coding MGP_CBAJ_T0087506.1 MGP_CBAJ_G0032978.1 mouse_genomes_project 8 579569 610794 + MGP_CBAJ_P0087506 Camsap3 protein_coding protein_coding MGP_CBAJ_T0087507.1 MGP_CBAJ_G0032978.1 mouse_genomes_project 8 579931 610769 + MGP_CBAJ_P0087507 Camsap3 protein_coding unknown_likely_coding MGP_CBAJ_T0089668.1 MGP_CBAJ_G0033666.1 mouse_genomes_project 8 114009766 114009987 + MGP_CBAJ_P0089668 Gm11020 protein_coding protein_coding MGP_CBAJ_T0088110.1 MGP_CBAJ_G0033191.1 mouse_genomes_project 8 34622007 34647249 - MGP_CBAJ_P0088110 Ubxn8 protein_coding protein_coding MGP_CBAJ_T0088744.1 MGP_CBAJ_G0033375.1 mouse_genomes_project 8 76082819 76085249 - 2810428I15Rik protein_coding retained_intron MGP_CBAJ_T0088745.1 MGP_CBAJ_G0033375.1 mouse_genomes_project 8 76082822 76084640 - 2810428I15Rik protein_coding retained_intron MGP_CBAJ_T0088746.1 MGP_CBAJ_G0033375.1 mouse_genomes_project 8 76082822 76084954 - 2810428I15Rik protein_coding processed_transcript MGP_CBAJ_T0088747.1 MGP_CBAJ_G0033375.1 mouse_genomes_project 8 76082822 76085280 - MGP_CBAJ_P0088747 2810428I15Rik protein_coding protein_coding MGP_CBAJ_T0088748.1 MGP_CBAJ_G0033375.1 mouse_genomes_project 8 76082826 76085265 - MGP_CBAJ_P0088748 2810428I15Rik protein_coding protein_coding MGP_CBAJ_T0088749.1 MGP_CBAJ_G0033375.1 mouse_genomes_project 8 76082925 76084636 - 2810428I15Rik protein_coding retained_intron MGP_CBAJ_T0088750.1 MGP_CBAJ_G0033375.1 mouse_genomes_project 8 76083772 76085227 - 2810428I15Rik protein_coding retained_intron MGP_CBAJ_T0088751.1 MGP_CBAJ_G0033375.1 mouse_genomes_project 8 76084378 76085241 - 2810428I15Rik protein_coding retained_intron MGP_CBAJ_T0090229.1 MGP_CBAJ_G0033865.1 mouse_genomes_project 8 133431168 133434927 + MGP_CBAJ_P0090229 Foxf1 protein_coding protein_coding MGP_CBAJ_T0089360.1 MGP_CBAJ_G0033566.1 mouse_genomes_project 8 92976187 93035442 - MGP_CBAJ_P0089360 Neto2 protein_coding protein_coding MGP_CBAJ_T0089361.1 MGP_CBAJ_G0033566.1 mouse_genomes_project 8 92980135 93045138 - MGP_CBAJ_P0089361 Neto2 protein_coding unknown_likely_coding MGP_CBAJ_T0005257.1 MGP_CBAJ_G0004451.1 mouse_genomes_project 8 14658637 14664941 + Gm16346 antisense antisense MGP_CBAJ_T0087730.1 MGP_CBAJ_G0033042.1 mouse_genomes_project 8 11378192 11417051 - MGP_CBAJ_P0087730 protein_coding protein_coding MGP_CBAJ_T0087731.1 MGP_CBAJ_G0033042.1 mouse_genomes_project 8 11392184 11417051 - MGP_CBAJ_P0087731 protein_coding protein_coding MGP_CBAJ_T0087732.1 MGP_CBAJ_G0033042.1 mouse_genomes_project 8 11397242 11398066 - protein_coding retained_intron MGP_CBAJ_T0087733.1 MGP_CBAJ_G0033042.1 mouse_genomes_project 8 11397490 11416960 - MGP_CBAJ_P0087733 protein_coding protein_coding MGP_CBAJ_T0087734.1 MGP_CBAJ_G0033042.1 mouse_genomes_project 8 11397622 11416985 - MGP_CBAJ_P0087734 protein_coding protein_coding MGP_CBAJ_T0018195.1 MGP_CBAJ_G0015452.1 mouse_genomes_project 8 43072664 43079373 + B430010I23Rik processed_transcript processed_transcript MGP_CBAJ_T0018196.1 MGP_CBAJ_G0015452.1 mouse_genomes_project 8 43072934 43075732 + B430010I23Rik processed_transcript processed_transcript MGP_CBAJ_T0087955.1 MGP_CBAJ_G0033137.1 mouse_genomes_project 8 24438920 24518372 - MGP_CBAJ_P0087955 Adam18 protein_coding protein_coding MGP_CBAJ_T0087956.1 MGP_CBAJ_G0033137.1 mouse_genomes_project 8 24438920 24518372 - MGP_CBAJ_P0087956 Adam18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087957.1 MGP_CBAJ_G0033137.1 mouse_genomes_project 8 24438924 24461050 - Adam18 protein_coding processed_transcript MGP_CBAJ_T0089362.1 MGP_CBAJ_G0033567.1 mouse_genomes_project 8 93063775 93215318 - MGP_CBAJ_P0089362 Itfg1 protein_coding protein_coding MGP_CBAJ_T0100807.1 MGP_CBAJ_G0039062.1 mouse_genomes_project 8 65293771 65293879 - Gm23329 snoRNA snoRNA MGP_CBAJ_T0090129.1 MGP_CBAJ_G0033837.1 mouse_genomes_project 8 131371943 131381480 + MGP_CBAJ_P0090129 Hsbp1 protein_coding protein_coding MGP_CBAJ_T0010877.1 MGP_CBAJ_G0009015.1 mouse_genomes_project 8 112144143 112144238 - Gm26301 miRNA miRNA MGP_CBAJ_T0088834.1 MGP_CBAJ_G0033406.1 mouse_genomes_project 8 77114396 77117269 + MGP_CBAJ_P0088834 Use1 protein_coding protein_coding MGP_CBAJ_T0088835.1 MGP_CBAJ_G0033406.1 mouse_genomes_project 8 77114490 77117272 + MGP_CBAJ_P0088835 Use1 protein_coding protein_coding MGP_CBAJ_T0088836.1 MGP_CBAJ_G0033406.1 mouse_genomes_project 8 77114553 77115355 + MGP_CBAJ_P0088836 Use1 protein_coding protein_coding MGP_CBAJ_T0088837.1 MGP_CBAJ_G0033406.1 mouse_genomes_project 8 77114765 77117272 + Use1 protein_coding retained_intron MGP_CBAJ_T0088838.1 MGP_CBAJ_G0033406.1 mouse_genomes_project 8 77114765 77117272 + Use1 protein_coding retained_intron MGP_CBAJ_T0088839.1 MGP_CBAJ_G0033406.1 mouse_genomes_project 8 77114765 77117272 + MGP_CBAJ_P0088839 Use1 protein_coding protein_coding MGP_CBAJ_T0088840.1 MGP_CBAJ_G0033406.1 mouse_genomes_project 8 77114791 77116371 + Use1 protein_coding retained_intron MGP_CBAJ_T0088841.1 MGP_CBAJ_G0033406.1 mouse_genomes_project 8 77114791 77116538 + Use1 protein_coding retained_intron MGP_CBAJ_T0088842.1 MGP_CBAJ_G0033406.1 mouse_genomes_project 8 77114932 77116225 + Use1 protein_coding retained_intron MGP_CBAJ_T0088843.1 MGP_CBAJ_G0033406.1 mouse_genomes_project 8 77115189 77115762 + Use1 protein_coding retained_intron MGP_CBAJ_T0088844.1 MGP_CBAJ_G0033406.1 mouse_genomes_project 8 77115328 77117272 + Use1 protein_coding retained_intron MGP_CBAJ_T0088845.1 MGP_CBAJ_G0033406.1 mouse_genomes_project 8 77116331 77117211 + Use1 protein_coding retained_intron MGP_CBAJ_T0005279.1 MGP_CBAJ_G0004468.1 mouse_genomes_project 8 65630926 65708782 - Gm16178 antisense antisense MGP_CBAJ_T0087844.1 MGP_CBAJ_G0033082.1 mouse_genomes_project 8 17980281 17981137 + MGP_CBAJ_P0087844 Defb14 protein_coding protein_coding MGP_CBAJ_T0099577.1 MGP_CBAJ_G0037832.1 mouse_genomes_project 8 127022158 127022262 - Gm23677 snRNA snRNA MGP_CBAJ_T0089197.1 MGP_CBAJ_G0033526.1 mouse_genomes_project 8 91904363 91905883 - MGP_CBAJ_P0089197 Ier2 protein_coding protein_coding MGP_CBAJ_T0087769.1 MGP_CBAJ_G0033056.1 mouse_genomes_project 8 12123423 12128907 - MGP_CBAJ_P0087769 Coprs protein_coding protein_coding MGP_CBAJ_T0088500.1 MGP_CBAJ_G0033304.1 mouse_genomes_project 8 66711281 66781420 - MGP_CBAJ_P0088500 Anxa10 protein_coding protein_coding MGP_CBAJ_T0088501.1 MGP_CBAJ_G0033304.1 mouse_genomes_project 8 66711760 66781426 - MGP_CBAJ_P0088501 Anxa10 protein_coding protein_coding MGP_CBAJ_T0090491.1 MGP_CBAJ_G0033936.1 mouse_genomes_project 8 137716523 137739850 - MGP_CBAJ_P0090491 2810004N23Rik protein_coding protein_coding MGP_CBAJ_T0089550.1 MGP_CBAJ_G0033624.1 mouse_genomes_project 8 102802114 102830578 - MGP_CBAJ_P0089550 Fam192a protein_coding protein_coding MGP_CBAJ_T0015784.1 MGP_CBAJ_G0013896.1 mouse_genomes_project 8 128824030 128824434 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0087655.1 MGP_CBAJ_G0033026.1 mouse_genomes_project 8 9726757 9828523 + MGP_CBAJ_P0087655 Arhgef7 protein_coding protein_coding MGP_CBAJ_T0087656.1 MGP_CBAJ_G0033026.1 mouse_genomes_project 8 9726904 9830181 + MGP_CBAJ_P0087656 Arhgef7 protein_coding protein_coding MGP_CBAJ_T0087657.1 MGP_CBAJ_G0033026.1 mouse_genomes_project 8 9787102 9840681 + MGP_CBAJ_P0087657 Arhgef7 protein_coding protein_coding MGP_CBAJ_T0087658.1 MGP_CBAJ_G0033026.1 mouse_genomes_project 8 9817822 9821807 + Arhgef7 protein_coding processed_transcript MGP_CBAJ_T0087659.1 MGP_CBAJ_G0033026.1 mouse_genomes_project 8 9835699 9837762 + Arhgef7 protein_coding processed_transcript MGP_CBAJ_T0097849.1 MGP_CBAJ_G0036122.1 mouse_genomes_project 8 128405256 128406592 - pseudogene pseudogene MGP_CBAJ_T0088939.1 MGP_CBAJ_G0033434.1 mouse_genomes_project 8 77805047 77824358 + MGP_CBAJ_P0088939 Zfp961 protein_coding protein_coding MGP_CBAJ_T0088940.1 MGP_CBAJ_G0033434.1 mouse_genomes_project 8 77805057 77824358 + Zfp961 protein_coding processed_transcript MGP_CBAJ_T0088941.1 MGP_CBAJ_G0033434.1 mouse_genomes_project 8 77805075 77823948 + Zfp961 protein_coding processed_transcript MGP_CBAJ_T0088942.1 MGP_CBAJ_G0033434.1 mouse_genomes_project 8 77805076 77822306 + Zfp961 protein_coding processed_transcript MGP_CBAJ_T0088943.1 MGP_CBAJ_G0033434.1 mouse_genomes_project 8 77805079 77822081 + Zfp961 protein_coding processed_transcript MGP_CBAJ_T0088944.1 MGP_CBAJ_G0033434.1 mouse_genomes_project 8 77805080 77822357 + MGP_CBAJ_P0088944 Zfp961 protein_coding protein_coding MGP_CBAJ_T0088945.1 MGP_CBAJ_G0033434.1 mouse_genomes_project 8 77805086 77822197 + Zfp961 protein_coding processed_transcript MGP_CBAJ_T0088946.1 MGP_CBAJ_G0033434.1 mouse_genomes_project 8 77805089 77822546 + Zfp961 protein_coding processed_transcript MGP_CBAJ_T0088947.1 MGP_CBAJ_G0033434.1 mouse_genomes_project 8 77805090 77820272 + Zfp961 protein_coding processed_transcript MGP_CBAJ_T0088948.1 MGP_CBAJ_G0033434.1 mouse_genomes_project 8 77805090 77823007 + MGP_CBAJ_P0088948 Zfp961 protein_coding protein_coding MGP_CBAJ_T0088949.1 MGP_CBAJ_G0033434.1 mouse_genomes_project 8 77805100 77879509 + Zfp961 protein_coding processed_transcript MGP_CBAJ_T0088950.1 MGP_CBAJ_G0033434.1 mouse_genomes_project 8 77805100 77825738 + MGP_CBAJ_P0088950 Zfp961 protein_coding protein_coding MGP_CBAJ_T0088951.1 MGP_CBAJ_G0033434.1 mouse_genomes_project 8 77807494 77822204 + Zfp961 protein_coding processed_transcript MGP_CBAJ_T0010821.1 MGP_CBAJ_G0008959.1 mouse_genomes_project 8 7491085 7491238 - miRNA miRNA MGP_CBAJ_T0099551.1 MGP_CBAJ_G0037806.1 mouse_genomes_project 8 63944196 63944304 + Gm24847 snRNA snRNA MGP_CBAJ_T0002289.1 MGP_CBAJ_G0002203.1 mouse_genomes_project 8 11455983 11458098 - TEC TEC MGP_CBAJ_T0010824.1 MGP_CBAJ_G0008962.1 mouse_genomes_project 8 10764131 10764235 + Gm26483 miRNA miRNA MGP_CBAJ_T0089661.1 MGP_CBAJ_G0033662.1 mouse_genomes_project 8 113873607 113895487 - MGP_CBAJ_P0089661 Tk2 protein_coding protein_coding MGP_CBAJ_T0015723.1 MGP_CBAJ_G0013835.1 mouse_genomes_project 8 18070147 18070985 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0089307.1 MGP_CBAJ_G0033547.1 mouse_genomes_project 8 92236967 92258412 + MGP_CBAJ_P0089307 Hook2 protein_coding protein_coding MGP_CBAJ_T0087851.1 MGP_CBAJ_G0033089.1 mouse_genomes_project 8 20248002 20249841 - MGP_CBAJ_P0087851 Gm15056 protein_coding protein_coding MGP_CBAJ_T0087852.1 MGP_CBAJ_G0033089.1 mouse_genomes_project 8 20248002 20249370 - MGP_CBAJ_P0087852 Gm15056 protein_coding protein_coding MGP_CBAJ_T0009078.1 MGP_CBAJ_G0007283.1 mouse_genomes_project 8 132257306 132259629 + A130014A01Rik lincRNA lincRNA MGP_CBAJ_T0088238.1 MGP_CBAJ_G0033229.1 mouse_genomes_project 8 43480325 43508279 - MGP_CBAJ_P0088238 Frg1 protein_coding protein_coding MGP_CBAJ_T0008994.1 MGP_CBAJ_G0007222.1 mouse_genomes_project 8 36861912 36868034 - Gm16793 lincRNA lincRNA MGP_CBAJ_T0090184.1 MGP_CBAJ_G0033856.1 mouse_genomes_project 8 132269940 132330627 + MGP_CBAJ_P0090184 6430548M08Rik protein_coding protein_coding MGP_CBAJ_T0090185.1 MGP_CBAJ_G0033856.1 mouse_genomes_project 8 132269940 132319945 + MGP_CBAJ_P0090185 6430548M08Rik protein_coding protein_coding MGP_CBAJ_T0090186.1 MGP_CBAJ_G0033856.1 mouse_genomes_project 8 132269941 132330625 + MGP_CBAJ_P0090186 6430548M08Rik protein_coding protein_coding MGP_CBAJ_T0090187.1 MGP_CBAJ_G0033856.1 mouse_genomes_project 8 132309742 132310798 + MGP_CBAJ_P0090187 6430548M08Rik protein_coding protein_coding MGP_CBAJ_T0090188.1 MGP_CBAJ_G0033856.1 mouse_genomes_project 8 132309983 132317916 + MGP_CBAJ_P0090188 6430548M08Rik protein_coding protein_coding MGP_CBAJ_T0090189.1 MGP_CBAJ_G0033856.1 mouse_genomes_project 8 132310208 132328209 + MGP_CBAJ_P0090189 6430548M08Rik protein_coding protein_coding MGP_CBAJ_T0090190.1 MGP_CBAJ_G0033856.1 mouse_genomes_project 8 132321184 132326707 + 6430548M08Rik protein_coding processed_transcript MGP_CBAJ_T0005275.1 MGP_CBAJ_G0004465.1 mouse_genomes_project 8 58297727 58336625 - 5330439A09Rik antisense antisense MGP_CBAJ_T0088741.1 MGP_CBAJ_G0033374.1 mouse_genomes_project 8 76071704 76082609 + MGP_CBAJ_P0088741 Crlf1 protein_coding protein_coding MGP_CBAJ_T0088742.1 MGP_CBAJ_G0033374.1 mouse_genomes_project 8 76071907 76079464 + MGP_CBAJ_P0088742 Crlf1 protein_coding protein_coding MGP_CBAJ_T0088743.1 MGP_CBAJ_G0033374.1 mouse_genomes_project 8 76079666 76082558 + MGP_CBAJ_P0088743 Crlf1 protein_coding protein_coding MGP_CBAJ_T0088455.1 MGP_CBAJ_G0033297.1 mouse_genomes_project 8 65373138 65392137 + MGP_CBAJ_P0088455 Hpf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088456.1 MGP_CBAJ_G0033297.1 mouse_genomes_project 8 65373165 65392135 + MGP_CBAJ_P0088456 Hpf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088457.1 MGP_CBAJ_G0033297.1 mouse_genomes_project 8 65373171 65392142 + MGP_CBAJ_P0088457 Hpf1 protein_coding protein_coding MGP_CBAJ_T0088458.1 MGP_CBAJ_G0033297.1 mouse_genomes_project 8 65373171 65390547 + MGP_CBAJ_P0088458 Hpf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088459.1 MGP_CBAJ_G0033297.1 mouse_genomes_project 8 65373209 65379773 + Hpf1 protein_coding retained_intron MGP_CBAJ_T0090348.1 MGP_CBAJ_G0033894.1 mouse_genomes_project 8 135359562 135399786 + MGP_CBAJ_P0090348 Acsf3 protein_coding unknown_likely_coding MGP_CBAJ_T0089957.1 MGP_CBAJ_G0033782.1 mouse_genomes_project 8 120845478 121248144 + MGP_CBAJ_P0089957 Hydin protein_coding protein_coding MGP_CBAJ_T0089958.1 MGP_CBAJ_G0033782.1 mouse_genomes_project 8 120845484 121247948 + MGP_CBAJ_P0089958 Hydin protein_coding unknown_likely_coding MGP_CBAJ_T0089624.1 MGP_CBAJ_G0033652.1 mouse_genomes_project 8 104029291 104067914 + MGP_CBAJ_P0089624 Ndrg4 protein_coding protein_coding MGP_CBAJ_T0089625.1 MGP_CBAJ_G0033652.1 mouse_genomes_project 8 104030552 104077518 + MGP_CBAJ_P0089625 Ndrg4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089626.1 MGP_CBAJ_G0033652.1 mouse_genomes_project 8 104030654 104077531 + MGP_CBAJ_P0089626 Ndrg4 protein_coding protein_coding MGP_CBAJ_T0089627.1 MGP_CBAJ_G0033652.1 mouse_genomes_project 8 104065329 104073710 + Ndrg4 protein_coding processed_transcript MGP_CBAJ_T0089628.1 MGP_CBAJ_G0033652.1 mouse_genomes_project 8 104067879 104074208 + Ndrg4 protein_coding retained_intron MGP_CBAJ_T0089629.1 MGP_CBAJ_G0033652.1 mouse_genomes_project 8 104068676 104076484 + Ndrg4 protein_coding processed_transcript MGP_CBAJ_T0089630.1 MGP_CBAJ_G0033652.1 mouse_genomes_project 8 104069235 104074117 + Ndrg4 protein_coding retained_intron MGP_CBAJ_T0089631.1 MGP_CBAJ_G0033652.1 mouse_genomes_project 8 104074462 104075781 + Ndrg4 protein_coding retained_intron MGP_CBAJ_T0015783.1 MGP_CBAJ_G0013895.1 mouse_genomes_project 8 115524744 115525145 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0090454.1 MGP_CBAJ_G0033924.1 mouse_genomes_project 8 136753602 136785169 - MGP_CBAJ_P0090454 Taf5l protein_coding protein_coding MGP_CBAJ_T0090455.1 MGP_CBAJ_G0033924.1 mouse_genomes_project 8 136753602 136784885 - MGP_CBAJ_P0090455 Taf5l protein_coding protein_coding MGP_CBAJ_T0099574.1 MGP_CBAJ_G0037829.1 mouse_genomes_project 8 122798350 122798454 + Gm23853 snRNA snRNA MGP_CBAJ_T0010889.1 MGP_CBAJ_G0009027.1 mouse_genomes_project 8 121767712 121767789 - Gm24103 miRNA miRNA MGP_CBAJ_T0088089.1 MGP_CBAJ_G0033179.1 mouse_genomes_project 8 31807707 31829986 + MGP_CBAJ_P0088089 Rnf122 protein_coding protein_coding MGP_CBAJ_T0088090.1 MGP_CBAJ_G0033179.1 mouse_genomes_project 8 31807717 31817975 + Rnf122 protein_coding retained_intron MGP_CBAJ_T0088091.1 MGP_CBAJ_G0033179.1 mouse_genomes_project 8 31808035 31827190 + MGP_CBAJ_P0088091 Rnf122 protein_coding unknown_likely_coding MGP_CBAJ_T0097845.1 MGP_CBAJ_G0036118.1 mouse_genomes_project 8 95699950 95700389 - pseudogene pseudogene MGP_CBAJ_T0088891.1 MGP_CBAJ_G0033421.1 mouse_genomes_project 8 77360996 77366848 - MGP_CBAJ_P0088891 Nxnl1 protein_coding protein_coding MGP_CBAJ_T0088892.1 MGP_CBAJ_G0033421.1 mouse_genomes_project 8 77360996 77366896 - MGP_CBAJ_P0088892 Nxnl1 protein_coding protein_coding MGP_CBAJ_T0097843.1 MGP_CBAJ_G0036116.1 mouse_genomes_project 8 81582925 81583467 + pseudogene pseudogene MGP_CBAJ_T0009049.1 MGP_CBAJ_G0007265.1 mouse_genomes_project 8 99786683 99793857 + Gm28511 lincRNA lincRNA MGP_CBAJ_T0088434.1 MGP_CBAJ_G0033291.1 mouse_genomes_project 8 61580004 61721464 - MGP_CBAJ_P0088434 Galnt7 protein_coding protein_coding MGP_CBAJ_T0088435.1 MGP_CBAJ_G0033291.1 mouse_genomes_project 8 61580876 61721445 - MGP_CBAJ_P0088435 Galnt7 protein_coding protein_coding MGP_CBAJ_T0088436.1 MGP_CBAJ_G0033291.1 mouse_genomes_project 8 61582200 61597016 - Galnt7 protein_coding processed_transcript MGP_CBAJ_T0088437.1 MGP_CBAJ_G0033291.1 mouse_genomes_project 8 61600607 61721464 - Galnt7 protein_coding retained_intron MGP_CBAJ_T0089162.1 MGP_CBAJ_G0033516.1 mouse_genomes_project 8 91341797 91349186 - MGP_CBAJ_P0089162 Dcaf15 protein_coding protein_coding MGP_CBAJ_T0089163.1 MGP_CBAJ_G0033516.1 mouse_genomes_project 8 91342175 91349250 - MGP_CBAJ_P0089163 Dcaf15 protein_coding unknown_likely_coding MGP_CBAJ_T0088175.1 MGP_CBAJ_G0033214.1 mouse_genomes_project 8 40817740 40968019 + MGP_CBAJ_P0088175 Tusc3 protein_coding protein_coding MGP_CBAJ_T0088670.1 MGP_CBAJ_G0033361.1 mouse_genomes_project 8 75729855 75737814 + Tmem161a protein_coding processed_transcript MGP_CBAJ_T0088671.1 MGP_CBAJ_G0033361.1 mouse_genomes_project 8 75729904 75740551 + MGP_CBAJ_P0088671 Tmem161a protein_coding nonsense_mediated_decay MGP_CBAJ_T0088672.1 MGP_CBAJ_G0033361.1 mouse_genomes_project 8 75729912 75739759 + MGP_CBAJ_P0088672 Tmem161a protein_coding nonsense_mediated_decay MGP_CBAJ_T0088673.1 MGP_CBAJ_G0033361.1 mouse_genomes_project 8 75729915 75734149 + Tmem161a protein_coding retained_intron MGP_CBAJ_T0088674.1 MGP_CBAJ_G0033361.1 mouse_genomes_project 8 75729915 75734423 + Tmem161a protein_coding processed_transcript MGP_CBAJ_T0088675.1 MGP_CBAJ_G0033361.1 mouse_genomes_project 8 75729918 75737622 + MGP_CBAJ_P0088675 Tmem161a protein_coding protein_coding MGP_CBAJ_T0088676.1 MGP_CBAJ_G0033361.1 mouse_genomes_project 8 75729937 75739023 + MGP_CBAJ_P0088676 Tmem161a protein_coding protein_coding MGP_CBAJ_T0088677.1 MGP_CBAJ_G0033361.1 mouse_genomes_project 8 75731775 75739751 + MGP_CBAJ_P0088677 Tmem161a protein_coding protein_coding MGP_CBAJ_T0088678.1 MGP_CBAJ_G0033361.1 mouse_genomes_project 8 75733838 75734556 + Tmem161a protein_coding retained_intron MGP_CBAJ_T0088679.1 MGP_CBAJ_G0033361.1 mouse_genomes_project 8 75734233 75735767 + Tmem161a protein_coding processed_transcript MGP_CBAJ_T0088680.1 MGP_CBAJ_G0033361.1 mouse_genomes_project 8 75734484 75738096 + MGP_CBAJ_P0088680 Tmem161a protein_coding nonsense_mediated_decay MGP_CBAJ_T0088681.1 MGP_CBAJ_G0033361.1 mouse_genomes_project 8 75735609 75738197 + Tmem161a protein_coding retained_intron MGP_CBAJ_T0088682.1 MGP_CBAJ_G0033361.1 mouse_genomes_project 8 75737422 75738916 + Tmem161a protein_coding retained_intron MGP_CBAJ_T0088063.1 MGP_CBAJ_G0033164.1 mouse_genomes_project 8 27215329 27233243 + MGP_CBAJ_P0088063 Erlin2 protein_coding protein_coding MGP_CBAJ_T0087855.1 MGP_CBAJ_G0033092.1 mouse_genomes_project 8 20862103 20864815 - MGP_CBAJ_P0087855 protein_coding protein_coding MGP_CBAJ_T0089955.1 MGP_CBAJ_G0033781.1 mouse_genomes_project 8 120783236 120788786 + MGP_CBAJ_P0089955 Cmtr2 protein_coding protein_coding MGP_CBAJ_T0089956.1 MGP_CBAJ_G0033781.1 mouse_genomes_project 8 120785560 120792058 + MGP_CBAJ_P0089956 Cmtr2 protein_coding protein_coding MGP_CBAJ_T0088431.1 MGP_CBAJ_G0033288.1 mouse_genomes_project 8 61332675 61336246 + MGP_CBAJ_P0088431 Hand2 protein_coding protein_coding MGP_CBAJ_T0088215.1 MGP_CBAJ_G0033225.1 mouse_genomes_project 8 43043808 43196676 - MGP_CBAJ_P0088215 Mtus1 protein_coding protein_coding MGP_CBAJ_T0088216.1 MGP_CBAJ_G0033225.1 mouse_genomes_project 8 43043812 43177756 - MGP_CBAJ_P0088216 Mtus1 protein_coding protein_coding MGP_CBAJ_T0088217.1 MGP_CBAJ_G0033225.1 mouse_genomes_project 8 43043812 43112189 - MGP_CBAJ_P0088217 Mtus1 protein_coding protein_coding MGP_CBAJ_T0088218.1 MGP_CBAJ_G0033225.1 mouse_genomes_project 8 43043946 43097005 - MGP_CBAJ_P0088218 Mtus1 protein_coding protein_coding MGP_CBAJ_T0088219.1 MGP_CBAJ_G0033225.1 mouse_genomes_project 8 43051663 43053099 - Mtus1 protein_coding retained_intron MGP_CBAJ_T0088220.1 MGP_CBAJ_G0033225.1 mouse_genomes_project 8 43053569 43071956 - Mtus1 protein_coding processed_transcript MGP_CBAJ_T0088221.1 MGP_CBAJ_G0033225.1 mouse_genomes_project 8 43053726 43071970 - MGP_CBAJ_P0088221 Mtus1 protein_coding protein_coding MGP_CBAJ_T0088222.1 MGP_CBAJ_G0033225.1 mouse_genomes_project 8 43055245 43071521 - MGP_CBAJ_P0088222 Mtus1 protein_coding protein_coding MGP_CBAJ_T0088223.1 MGP_CBAJ_G0033225.1 mouse_genomes_project 8 43069541 43094753 - Mtus1 protein_coding processed_transcript MGP_CBAJ_T0088224.1 MGP_CBAJ_G0033225.1 mouse_genomes_project 8 43074165 43112178 - Mtus1 protein_coding processed_transcript MGP_CBAJ_T0088225.1 MGP_CBAJ_G0033225.1 mouse_genomes_project 8 43074726 43078059 - Mtus1 protein_coding retained_intron MGP_CBAJ_T0088226.1 MGP_CBAJ_G0033225.1 mouse_genomes_project 8 43107427 43145242 - MGP_CBAJ_P0088226 Mtus1 protein_coding protein_coding MGP_CBAJ_T0088227.1 MGP_CBAJ_G0033225.1 mouse_genomes_project 8 43107542 43196676 - MGP_CBAJ_P0088227 Mtus1 protein_coding protein_coding MGP_CBAJ_T0088228.1 MGP_CBAJ_G0033225.1 mouse_genomes_project 8 43147028 43196668 - MGP_CBAJ_P0088228 Mtus1 protein_coding protein_coding MGP_CBAJ_T0088071.1 MGP_CBAJ_G0033168.1 mouse_genomes_project 8 27343883 27388767 - MGP_CBAJ_P0088071 Rab11fip1 protein_coding protein_coding MGP_CBAJ_T0088072.1 MGP_CBAJ_G0033168.1 mouse_genomes_project 8 27343883 27388767 - MGP_CBAJ_P0088072 Rab11fip1 protein_coding protein_coding MGP_CBAJ_T0087857.1 MGP_CBAJ_G0033094.1 mouse_genomes_project 8 21135144 21137859 - MGP_CBAJ_P0087857 protein_coding protein_coding MGP_CBAJ_T0089010.1 MGP_CBAJ_G0033460.1 mouse_genomes_project 8 81255785 81274718 + MGP_CBAJ_P0089010 Mcm5 protein_coding protein_coding MGP_CBAJ_T0088920.1 MGP_CBAJ_G0033429.1 mouse_genomes_project 8 77497433 77511180 - MGP_CBAJ_P0088920 B3gnt3 protein_coding protein_coding MGP_CBAJ_T0087735.1 MGP_CBAJ_G0033043.1 mouse_genomes_project 8 11418843 11458438 - MGP_CBAJ_P0087735 Dcun1d2 protein_coding protein_coding MGP_CBAJ_T0087736.1 MGP_CBAJ_G0033043.1 mouse_genomes_project 8 11418851 11458757 - MGP_CBAJ_P0087736 Dcun1d2 protein_coding protein_coding MGP_CBAJ_T0087737.1 MGP_CBAJ_G0033043.1 mouse_genomes_project 8 11418852 11458462 - MGP_CBAJ_P0087737 Dcun1d2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087738.1 MGP_CBAJ_G0033043.1 mouse_genomes_project 8 11418853 11458756 - Dcun1d2 protein_coding processed_transcript MGP_CBAJ_T0087739.1 MGP_CBAJ_G0033043.1 mouse_genomes_project 8 11422791 11458465 - MGP_CBAJ_P0087739 Dcun1d2 protein_coding protein_coding MGP_CBAJ_T0087740.1 MGP_CBAJ_G0033043.1 mouse_genomes_project 8 11445599 11448663 - Dcun1d2 protein_coding retained_intron MGP_CBAJ_T0010874.1 MGP_CBAJ_G0009012.1 mouse_genomes_project 8 102728058 102728118 + Mir7072 miRNA miRNA MGP_CBAJ_T0088097.1 MGP_CBAJ_G0033183.1 mouse_genomes_project 8 32536052 32538755 - MGP_CBAJ_P0088097 protein_coding protein_coding MGP_CBAJ_T0087493.1 MGP_CBAJ_G0032975.1 mouse_genomes_project 8 471108 488901 + MGP_CBAJ_P0087493 Mcoln1 protein_coding protein_coding MGP_CBAJ_T0087494.1 MGP_CBAJ_G0032975.1 mouse_genomes_project 8 471155 480610 + MGP_CBAJ_P0087494 Mcoln1 protein_coding protein_coding MGP_CBAJ_T0087495.1 MGP_CBAJ_G0032975.1 mouse_genomes_project 8 479447 488901 + Mcoln1 protein_coding retained_intron MGP_CBAJ_T0087496.1 MGP_CBAJ_G0032975.1 mouse_genomes_project 8 484335 486691 + Mcoln1 protein_coding retained_intron MGP_CBAJ_T0087497.1 MGP_CBAJ_G0032975.1 mouse_genomes_project 8 485264 486476 + Mcoln1 protein_coding retained_intron MGP_CBAJ_T0087498.1 MGP_CBAJ_G0032975.1 mouse_genomes_project 8 486350 488893 + Mcoln1 protein_coding retained_intron MGP_CBAJ_T0087499.1 MGP_CBAJ_G0032975.1 mouse_genomes_project 8 488230 488901 + Mcoln1 protein_coding retained_intron MGP_CBAJ_T0087746.1 MGP_CBAJ_G0033048.1 mouse_genomes_project 8 11635550 11661544 + MGP_CBAJ_P0087746 Tmem255b protein_coding protein_coding MGP_CBAJ_T0087747.1 MGP_CBAJ_G0033048.1 mouse_genomes_project 8 11635550 11661544 + MGP_CBAJ_P0087747 Tmem255b protein_coding protein_coding MGP_CBAJ_T0098105.1 MGP_CBAJ_G0036378.1 mouse_genomes_project 8 58619063 58619182 + n-R5s98 rRNA rRNA MGP_CBAJ_T0100789.1 MGP_CBAJ_G0039044.1 mouse_genomes_project 8 21135804 21135896 - snoRNA snoRNA MGP_CBAJ_T0015773.1 MGP_CBAJ_G0013885.1 mouse_genomes_project 8 96870526 96871141 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010828.1 MGP_CBAJ_G0008966.1 mouse_genomes_project 8 12108326 12108420 + miRNA miRNA MGP_CBAJ_T0088818.1 MGP_CBAJ_G0033401.1 mouse_genomes_project 8 76546926 76559029 - MGP_CBAJ_P0088818 Rpl18a protein_coding protein_coding MGP_CBAJ_T0011584.1 MGP_CBAJ_G0009722.1 mouse_genomes_project 8 5012125 5012327 + Gm27545 misc_RNA misc_RNA MGP_CBAJ_T0088083.1 MGP_CBAJ_G0033177.1 mouse_genomes_project 8 29115180 29729292 - MGP_CBAJ_P0088083 Unc5d protein_coding protein_coding MGP_CBAJ_T0087806.1 MGP_CBAJ_G0033067.1 mouse_genomes_project 8 13392597 13397015 - MGP_CBAJ_P0087806 BB014433 protein_coding protein_coding MGP_CBAJ_T0087807.1 MGP_CBAJ_G0033067.1 mouse_genomes_project 8 13393301 13397024 - MGP_CBAJ_P0087807 BB014433 protein_coding protein_coding MGP_CBAJ_T0018185.1 MGP_CBAJ_G0015446.1 mouse_genomes_project 8 1219046 1263399 - 4932443L11Rik processed_transcript processed_transcript MGP_CBAJ_T0018186.1 MGP_CBAJ_G0015446.1 mouse_genomes_project 8 1234651 1262804 - 4932443L11Rik processed_transcript processed_transcript MGP_CBAJ_T0100782.1 MGP_CBAJ_G0039037.1 mouse_genomes_project 8 12544868 12544999 - Gm26184 snoRNA snoRNA MGP_CBAJ_T0088032.1 MGP_CBAJ_G0033154.1 mouse_genomes_project 8 25814497 25823437 + MGP_CBAJ_P0088032 Star protein_coding protein_coding MGP_CBAJ_T0099556.1 MGP_CBAJ_G0037811.1 mouse_genomes_project 8 77916910 77917068 + Gm25052 snRNA snRNA MGP_CBAJ_T0087936.1 MGP_CBAJ_G0033128.1 mouse_genomes_project 8 22816724 22855088 - MGP_CBAJ_P0087936 Gpat4 protein_coding protein_coding MGP_CBAJ_T0089099.1 MGP_CBAJ_G0033492.1 mouse_genomes_project 8 90434027 90442072 + MGP_CBAJ_P0089099 Ucp1 protein_coding protein_coding MGP_CBAJ_T0089706.1 MGP_CBAJ_G0033685.1 mouse_genomes_project 8 114833419 114847304 + MGP_CBAJ_P0089706 Ces3b protein_coding protein_coding MGP_CBAJ_T0089707.1 MGP_CBAJ_G0033685.1 mouse_genomes_project 8 114842226 114846498 + MGP_CBAJ_P0089707 Ces3b protein_coding nonsense_mediated_decay MGP_CBAJ_T0100826.1 MGP_CBAJ_G0039081.1 mouse_genomes_project 8 98934529 98934661 - Gm22428 snoRNA snoRNA MGP_CBAJ_T0088683.1 MGP_CBAJ_G0033362.1 mouse_genomes_project 8 75741223 75768527 - Slc25a42 protein_coding retained_intron MGP_CBAJ_T0088684.1 MGP_CBAJ_G0033362.1 mouse_genomes_project 8 75741223 75768527 - MGP_CBAJ_P0088684 Slc25a42 protein_coding protein_coding MGP_CBAJ_T0088685.1 MGP_CBAJ_G0033362.1 mouse_genomes_project 8 75741223 75768478 - MGP_CBAJ_P0088685 Slc25a42 protein_coding protein_coding MGP_CBAJ_T0088686.1 MGP_CBAJ_G0033362.1 mouse_genomes_project 8 75744509 75768527 - Slc25a42 protein_coding retained_intron MGP_CBAJ_T0088687.1 MGP_CBAJ_G0033362.1 mouse_genomes_project 8 75749189 75768527 - Slc25a42 protein_coding retained_intron MGP_CBAJ_T0089067.1 MGP_CBAJ_G0033479.1 mouse_genomes_project 8 86418730 86486153 + MGP_CBAJ_P0089067 Anapc10 protein_coding protein_coding MGP_CBAJ_T0087500.1 MGP_CBAJ_G0032976.1 mouse_genomes_project 8 489052 519651 + MGP_CBAJ_P0087500 Pnpla6 protein_coding protein_coding MGP_CBAJ_T0087501.1 MGP_CBAJ_G0032976.1 mouse_genomes_project 8 489052 519651 + MGP_CBAJ_P0087501 Pnpla6 protein_coding protein_coding MGP_CBAJ_T0087502.1 MGP_CBAJ_G0032976.1 mouse_genomes_project 8 489101 513616 + MGP_CBAJ_P0087502 Pnpla6 protein_coding unknown_likely_coding MGP_CBAJ_T0088253.1 MGP_CBAJ_G0033238.1 mouse_genomes_project 8 47615011 47636642 + MGP_CBAJ_P0088253 Mtnr1a protein_coding protein_coding MGP_CBAJ_T0088254.1 MGP_CBAJ_G0033238.1 mouse_genomes_project 8 47615248 47635642 + MGP_CBAJ_P0088254 Mtnr1a protein_coding protein_coding MGP_CBAJ_T0088757.1 MGP_CBAJ_G0033377.1 mouse_genomes_project 8 76086998 76109499 - MGP_CBAJ_P0088757 Kxd1 protein_coding protein_coding MGP_CBAJ_T0088761.1 MGP_CBAJ_G0033377.1 mouse_genomes_project 8 76089533 76115357 - MGP_CBAJ_P0088761 Kxd1 protein_coding protein_coding MGP_CBAJ_T0088762.1 MGP_CBAJ_G0033377.1 mouse_genomes_project 8 76099799 76109516 - MGP_CBAJ_P0088762 Kxd1 protein_coding protein_coding MGP_CBAJ_T0088763.1 MGP_CBAJ_G0033377.1 mouse_genomes_project 8 76100007 76109615 - MGP_CBAJ_P0088763 Kxd1 protein_coding protein_coding MGP_CBAJ_T0088764.1 MGP_CBAJ_G0033377.1 mouse_genomes_project 8 76100530 76109516 - MGP_CBAJ_P0088764 Kxd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088765.1 MGP_CBAJ_G0033377.1 mouse_genomes_project 8 76101093 76115357 - MGP_CBAJ_P0088765 Kxd1 protein_coding protein_coding MGP_CBAJ_T0088766.1 MGP_CBAJ_G0033377.1 mouse_genomes_project 8 76101906 76109426 - MGP_CBAJ_P0088766 Kxd1 protein_coding protein_coding MGP_CBAJ_T0088767.1 MGP_CBAJ_G0033377.1 mouse_genomes_project 8 76104928 76115184 - MGP_CBAJ_P0088767 Kxd1 protein_coding protein_coding MGP_CBAJ_T0088768.1 MGP_CBAJ_G0033377.1 mouse_genomes_project 8 76105537 76109440 - Kxd1 protein_coding retained_intron MGP_CBAJ_T0088792.1 MGP_CBAJ_G0033388.1 mouse_genomes_project 8 76346965 76351839 + MGP_CBAJ_P0088792 Gm3336 protein_coding protein_coding MGP_CBAJ_T0010823.1 MGP_CBAJ_G0008961.1 mouse_genomes_project 8 10468834 10468920 + Gm25239 miRNA miRNA MGP_CBAJ_T0009042.1 MGP_CBAJ_G0007260.1 mouse_genomes_project 8 94963872 94983859 - Gm27016 lincRNA lincRNA MGP_CBAJ_T0100822.1 MGP_CBAJ_G0039077.1 mouse_genomes_project 8 92319282 92319352 + Gm25506 snoRNA snoRNA MGP_CBAJ_T0090299.1 MGP_CBAJ_G0033879.1 mouse_genomes_project 8 134883430 134887198 - MGP_CBAJ_P0090299 Trhr2 protein_coding protein_coding MGP_CBAJ_T0088790.1 MGP_CBAJ_G0033386.1 mouse_genomes_project 8 76322663 76325580 + MGP_CBAJ_P0088790 Jund protein_coding protein_coding MGP_CBAJ_T0089990.1 MGP_CBAJ_G0033790.1 mouse_genomes_project 8 121671190 121705521 - MGP_CBAJ_P0089990 Ddx19a protein_coding protein_coding MGP_CBAJ_T0089991.1 MGP_CBAJ_G0033790.1 mouse_genomes_project 8 121673908 121679945 - Ddx19a protein_coding retained_intron MGP_CBAJ_T0089992.1 MGP_CBAJ_G0033790.1 mouse_genomes_project 8 121679783 121705568 - Ddx19a protein_coding retained_intron MGP_CBAJ_T0101186.1 MGP_CBAJ_G0039353.1 mouse_genomes_project 8 77764168 77766436 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101187.1 MGP_CBAJ_G0039353.1 mouse_genomes_project 8 77764787 77765410 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0089100.1 MGP_CBAJ_G0033493.1 mouse_genomes_project 8 90456495 90485875 - MGP_CBAJ_P0089100 Elmod2 protein_coding protein_coding MGP_CBAJ_T0089101.1 MGP_CBAJ_G0033493.1 mouse_genomes_project 8 90456885 90485875 - MGP_CBAJ_P0089101 Elmod2 protein_coding protein_coding MGP_CBAJ_T0089102.1 MGP_CBAJ_G0033493.1 mouse_genomes_project 8 90463523 90473750 - Elmod2 protein_coding retained_intron MGP_CBAJ_T0089103.1 MGP_CBAJ_G0033493.1 mouse_genomes_project 8 90465807 90484838 - Elmod2 protein_coding retained_intron MGP_CBAJ_T0089104.1 MGP_CBAJ_G0033493.1 mouse_genomes_project 8 90473343 90485793 - Elmod2 protein_coding retained_intron MGP_CBAJ_T0089105.1 MGP_CBAJ_G0033493.1 mouse_genomes_project 8 90477833 90485793 - Elmod2 protein_coding retained_intron MGP_CBAJ_T0088642.1 MGP_CBAJ_G0033350.1 mouse_genomes_project 8 75436980 75438315 + MGP_CBAJ_P0088642 Tssk6 protein_coding protein_coding MGP_CBAJ_T0090051.1 MGP_CBAJ_G0033807.1 mouse_genomes_project 8 122853584 122875233 - MGP_CBAJ_P0090051 Tmem231 protein_coding protein_coding MGP_CBAJ_T0009013.1 MGP_CBAJ_G0007240.1 mouse_genomes_project 8 80674983 80935811 - lincRNA lincRNA MGP_CBAJ_T0009014.1 MGP_CBAJ_G0007240.1 mouse_genomes_project 8 80925027 80935784 - lincRNA lincRNA MGP_CBAJ_T0011582.1 MGP_CBAJ_G0009720.1 mouse_genomes_project 8 1338824 1339108 + Gm26102 misc_RNA misc_RNA MGP_CBAJ_T0015742.1 MGP_CBAJ_G0013854.1 mouse_genomes_project 8 44091043 44095848 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010896.1 MGP_CBAJ_G0009034.1 mouse_genomes_project 8 132641663 132641754 - Gm22715 miRNA miRNA MGP_CBAJ_T0089529.1 MGP_CBAJ_G0033617.1 mouse_genomes_project 8 102359220 102360170 + MGP_CBAJ_P0089529 Mt2 protein_coding protein_coding MGP_CBAJ_T0097841.1 MGP_CBAJ_G0036114.1 mouse_genomes_project 8 25572662 25573679 + pseudogene pseudogene MGP_CBAJ_T0009070.1 MGP_CBAJ_G0007277.1 mouse_genomes_project 8 116188949 116396687 - Gm26786 lincRNA lincRNA MGP_CBAJ_T0089632.1 MGP_CBAJ_G0033653.1 mouse_genomes_project 8 104078480 104079347 + Setd6 protein_coding processed_transcript MGP_CBAJ_T0089633.1 MGP_CBAJ_G0033653.1 mouse_genomes_project 8 104078497 104081562 + MGP_CBAJ_P0089633 Setd6 protein_coding protein_coding MGP_CBAJ_T0089634.1 MGP_CBAJ_G0033653.1 mouse_genomes_project 8 104078727 104079803 + Setd6 protein_coding processed_transcript MGP_CBAJ_T0089635.1 MGP_CBAJ_G0033653.1 mouse_genomes_project 8 104079176 104081071 + Setd6 protein_coding processed_transcript MGP_CBAJ_T0089636.1 MGP_CBAJ_G0033653.1 mouse_genomes_project 8 104079185 104080618 + Setd6 protein_coding processed_transcript MGP_CBAJ_T0089637.1 MGP_CBAJ_G0033653.1 mouse_genomes_project 8 104079574 104081423 + Setd6 protein_coding processed_transcript MGP_CBAJ_T0088568.1 MGP_CBAJ_G0033328.1 mouse_genomes_project 8 74208338 74243328 + MGP_CBAJ_P0088568 Ints10 protein_coding protein_coding MGP_CBAJ_T0088569.1 MGP_CBAJ_G0033328.1 mouse_genomes_project 8 74208344 74236459 + MGP_CBAJ_P0088569 Ints10 protein_coding protein_coding MGP_CBAJ_T0088570.1 MGP_CBAJ_G0033328.1 mouse_genomes_project 8 74208365 74213117 + Ints10 protein_coding retained_intron MGP_CBAJ_T0088571.1 MGP_CBAJ_G0033328.1 mouse_genomes_project 8 74208365 74243326 + MGP_CBAJ_P0088571 Ints10 protein_coding protein_coding MGP_CBAJ_T0088572.1 MGP_CBAJ_G0033328.1 mouse_genomes_project 8 74208383 74213117 + Ints10 protein_coding retained_intron MGP_CBAJ_T0088573.1 MGP_CBAJ_G0033328.1 mouse_genomes_project 8 74208424 74243326 + MGP_CBAJ_P0088573 Ints10 protein_coding protein_coding MGP_CBAJ_T0088574.1 MGP_CBAJ_G0033328.1 mouse_genomes_project 8 74226176 74228826 + Ints10 protein_coding retained_intron MGP_CBAJ_T0088575.1 MGP_CBAJ_G0033328.1 mouse_genomes_project 8 74234833 74241435 + MGP_CBAJ_P0088575 Ints10 protein_coding protein_coding MGP_CBAJ_T0009097.1 MGP_CBAJ_G0007298.1 mouse_genomes_project 8 134334109 134334936 - lincRNA lincRNA MGP_CBAJ_T0087632.1 MGP_CBAJ_G0033017.1 mouse_genomes_project 8 8872938 8894476 - MGP_CBAJ_P0087632 Irs2 protein_coding protein_coding MGP_CBAJ_T0015788.1 MGP_CBAJ_G0013900.1 mouse_genomes_project 8 136754817 136755504 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0087665.1 MGP_CBAJ_G0033029.1 mouse_genomes_project 8 10467722 10472558 + MGP_CBAJ_P0087665 Sox1 protein_coding protein_coding MGP_CBAJ_T0087480.1 MGP_CBAJ_G0032971.1 mouse_genomes_project 8 277815 405652 + MGP_CBAJ_P0087480 Arhgef18 protein_coding protein_coding MGP_CBAJ_T0087481.1 MGP_CBAJ_G0032971.1 mouse_genomes_project 8 328868 399682 + Arhgef18 protein_coding retained_intron MGP_CBAJ_T0087482.1 MGP_CBAJ_G0032971.1 mouse_genomes_project 8 328935 373070 + Arhgef18 protein_coding processed_transcript MGP_CBAJ_T0087483.1 MGP_CBAJ_G0032971.1 mouse_genomes_project 8 328935 373438 + MGP_CBAJ_P0087483 Arhgef18 protein_coding protein_coding MGP_CBAJ_T0087484.1 MGP_CBAJ_G0032971.1 mouse_genomes_project 8 380802 405642 + Arhgef18 protein_coding retained_intron MGP_CBAJ_T0087485.1 MGP_CBAJ_G0032971.1 mouse_genomes_project 8 399799 403310 + Arhgef18 protein_coding retained_intron MGP_CBAJ_T0088817.1 MGP_CBAJ_G0033400.1 mouse_genomes_project 8 76535148 76544965 - MGP_CBAJ_P0088817 Slc5a5 protein_coding protein_coding MGP_CBAJ_T0089111.1 MGP_CBAJ_G0033497.1 mouse_genomes_project 8 90768294 90773151 + MGP_CBAJ_P0089111 Ndufb7 protein_coding protein_coding MGP_CBAJ_T0089112.1 MGP_CBAJ_G0033497.1 mouse_genomes_project 8 90768381 90773151 + Ndufb7 protein_coding retained_intron MGP_CBAJ_T0089933.1 MGP_CBAJ_G0033768.1 mouse_genomes_project 8 120074853 120146332 + MGP_CBAJ_P0089933 Pkd1l3 protein_coding protein_coding MGP_CBAJ_T0089934.1 MGP_CBAJ_G0033768.1 mouse_genomes_project 8 120084083 120144416 + MGP_CBAJ_P0089934 Pkd1l3 protein_coding protein_coding MGP_CBAJ_T0088783.1 MGP_CBAJ_G0033382.1 mouse_genomes_project 8 76208939 76212952 + MGP_CBAJ_P0088783 Lrrc25 protein_coding protein_coding MGP_CBAJ_T0099559.1 MGP_CBAJ_G0037814.1 mouse_genomes_project 8 84029287 84029395 - Gm23468 snRNA snRNA MGP_CBAJ_T0090067.1 MGP_CBAJ_G0033813.1 mouse_genomes_project 8 124817414 124830145 + MGP_CBAJ_P0090067 Mon1b protein_coding protein_coding MGP_CBAJ_T0090068.1 MGP_CBAJ_G0033813.1 mouse_genomes_project 8 124817627 124830145 + MGP_CBAJ_P0090068 Mon1b protein_coding protein_coding MGP_CBAJ_T0015740.1 MGP_CBAJ_G0013852.1 mouse_genomes_project 8 39752955 39755761 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0087982.1 MGP_CBAJ_G0033142.1 mouse_genomes_project 8 24878266 24883676 + MGP_CBAJ_P0087982 Tm2d2 protein_coding protein_coding MGP_CBAJ_T0087743.1 MGP_CBAJ_G0033045.1 mouse_genomes_project 8 11525876 11567031 + MGP_CBAJ_P0087743 Tfdp1 protein_coding unknown_likely_coding MGP_CBAJ_T0088147.1 MGP_CBAJ_G0033202.1 mouse_genomes_project 8 35976117 36121439 - MGP_CBAJ_P0088147 Tnks protein_coding protein_coding MGP_CBAJ_T0090159.1 MGP_CBAJ_G0033850.1 mouse_genomes_project 8 131857035 131878638 - MGP_CBAJ_P0090159 Tldc1 protein_coding protein_coding MGP_CBAJ_T0010885.1 MGP_CBAJ_G0009023.1 mouse_genomes_project 8 119286328 119286407 + Mir3108 miRNA miRNA MGP_CBAJ_T0009066.1 MGP_CBAJ_G0007274.1 mouse_genomes_project 8 108345741 108353751 + lincRNA lincRNA MGP_CBAJ_T0008975.1 MGP_CBAJ_G0007207.1 mouse_genomes_project 8 21949381 21950257 + 1810012K16Rik lincRNA lincRNA MGP_CBAJ_T0010901.1 MGP_CBAJ_G0009039.1 mouse_genomes_project 8 135725530 135725599 + Mir7079 miRNA miRNA MGP_CBAJ_T0088259.1 MGP_CBAJ_G0033242.1 mouse_genomes_project 8 47923778 47945803 - MGP_CBAJ_P0088259 Fam149a protein_coding protein_coding MGP_CBAJ_T0088260.1 MGP_CBAJ_G0033242.1 mouse_genomes_project 8 47923786 47971677 - MGP_CBAJ_P0088260 Fam149a protein_coding protein_coding MGP_CBAJ_T0088261.1 MGP_CBAJ_G0033242.1 mouse_genomes_project 8 47925820 47945700 - MGP_CBAJ_P0088261 Fam149a protein_coding protein_coding MGP_CBAJ_T0089466.1 MGP_CBAJ_G0033594.1 mouse_genomes_project 8 99716347 99719731 - MGP_CBAJ_P0089466 Irx3 protein_coding protein_coding MGP_CBAJ_T0089467.1 MGP_CBAJ_G0033594.1 mouse_genomes_project 8 99716347 99719730 - MGP_CBAJ_P0089467 Irx3 protein_coding protein_coding MGP_CBAJ_T0088965.1 MGP_CBAJ_G0033442.1 mouse_genomes_project 8 78155289 78180434 + MGP_CBAJ_P0088965 Ap1m1 protein_coding protein_coding MGP_CBAJ_T0088966.1 MGP_CBAJ_G0033442.1 mouse_genomes_project 8 78155381 78173061 + MGP_CBAJ_P0088966 Ap1m1 protein_coding protein_coding MGP_CBAJ_T0088967.1 MGP_CBAJ_G0033442.1 mouse_genomes_project 8 78155594 78174997 + MGP_CBAJ_P0088967 Ap1m1 protein_coding protein_coding MGP_CBAJ_T0088968.1 MGP_CBAJ_G0033442.1 mouse_genomes_project 8 78176036 78179590 + Ap1m1 protein_coding retained_intron MGP_CBAJ_T0088969.1 MGP_CBAJ_G0033442.1 mouse_genomes_project 8 78176116 78179962 + Ap1m1 protein_coding retained_intron MGP_CBAJ_T0088401.1 MGP_CBAJ_G0033277.1 mouse_genomes_project 8 57764572 57870290 + MGP_CBAJ_P0088401 Vegfc protein_coding protein_coding MGP_CBAJ_T0087887.1 MGP_CBAJ_G0033113.1 mouse_genomes_project 8 21751890 21804397 + MGP_CBAJ_P0087887 Thsd1 protein_coding protein_coding MGP_CBAJ_T0087888.1 MGP_CBAJ_G0033113.1 mouse_genomes_project 8 21751922 21803443 + MGP_CBAJ_P0087888 Thsd1 protein_coding protein_coding MGP_CBAJ_T0087889.1 MGP_CBAJ_G0033113.1 mouse_genomes_project 8 21751939 21803441 + Thsd1 protein_coding processed_transcript MGP_CBAJ_T0089691.1 MGP_CBAJ_G0033675.1 mouse_genomes_project 8 114355261 114365517 - MGP_CBAJ_P0089691 Cdh16 protein_coding protein_coding MGP_CBAJ_T0087985.1 MGP_CBAJ_G0033144.1 mouse_genomes_project 8 24901594 24979494 - MGP_CBAJ_P0087985 Plekha2 protein_coding protein_coding MGP_CBAJ_T0087986.1 MGP_CBAJ_G0033144.1 mouse_genomes_project 8 24903289 24979285 - MGP_CBAJ_P0087986 Plekha2 protein_coding protein_coding MGP_CBAJ_T0087987.1 MGP_CBAJ_G0033144.1 mouse_genomes_project 8 24905427 24979072 - MGP_CBAJ_P0087987 Plekha2 protein_coding protein_coding MGP_CBAJ_T0087988.1 MGP_CBAJ_G0033144.1 mouse_genomes_project 8 24924791 24968675 - MGP_CBAJ_P0087988 Plekha2 protein_coding protein_coding MGP_CBAJ_T0088791.1 MGP_CBAJ_G0033387.1 mouse_genomes_project 8 76324460 76325003 - MGP_CBAJ_P0088791 protein_coding protein_coding MGP_CBAJ_T0097842.1 MGP_CBAJ_G0036115.1 mouse_genomes_project 8 36120803 36121958 + pseudogene pseudogene MGP_CBAJ_T0015721.1 MGP_CBAJ_G0013833.1 mouse_genomes_project 8 13451574 13452597 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0089731.1 MGP_CBAJ_G0033692.1 mouse_genomes_project 8 115081687 115087573 + MGP_CBAJ_P0089731 Hsf4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089732.1 MGP_CBAJ_G0033692.1 mouse_genomes_project 8 115081715 115087736 + MGP_CBAJ_P0089732 Hsf4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089733.1 MGP_CBAJ_G0033692.1 mouse_genomes_project 8 115081760 115087545 + MGP_CBAJ_P0089733 Hsf4 protein_coding protein_coding MGP_CBAJ_T0089734.1 MGP_CBAJ_G0033692.1 mouse_genomes_project 8 115081760 115087545 + MGP_CBAJ_P0089734 Hsf4 protein_coding protein_coding MGP_CBAJ_T0089735.1 MGP_CBAJ_G0033692.1 mouse_genomes_project 8 115081760 115087738 + MGP_CBAJ_P0089735 Hsf4 protein_coding protein_coding MGP_CBAJ_T0088429.1 MGP_CBAJ_G0033287.1 mouse_genomes_project 8 60465742 60487504 + Fbxo8 protein_coding retained_intron MGP_CBAJ_T0088430.1 MGP_CBAJ_G0033287.1 mouse_genomes_project 8 60465912 60507971 + MGP_CBAJ_P0088430 Fbxo8 protein_coding protein_coding MGP_CBAJ_T0018216.1 MGP_CBAJ_G0015459.1 mouse_genomes_project 8 82907281 83242732 - processed_transcript processed_transcript MGP_CBAJ_T0018217.1 MGP_CBAJ_G0015459.1 mouse_genomes_project 8 83083556 83242954 - processed_transcript processed_transcript MGP_CBAJ_T0018218.1 MGP_CBAJ_G0015459.1 mouse_genomes_project 8 83179216 83243402 - processed_transcript retained_intron MGP_CBAJ_T0088643.1 MGP_CBAJ_G0033351.1 mouse_genomes_project 8 75441836 75539962 - MGP_CBAJ_P0088643 Gatad2a protein_coding protein_coding MGP_CBAJ_T0088644.1 MGP_CBAJ_G0033351.1 mouse_genomes_project 8 75441836 75511108 - MGP_CBAJ_P0088644 Gatad2a protein_coding protein_coding MGP_CBAJ_T0088645.1 MGP_CBAJ_G0033351.1 mouse_genomes_project 8 75441836 75539962 - MGP_CBAJ_P0088645 Gatad2a protein_coding protein_coding MGP_CBAJ_T0088646.1 MGP_CBAJ_G0033351.1 mouse_genomes_project 8 75441891 75485336 - MGP_CBAJ_P0088646 Gatad2a protein_coding unknown_likely_coding MGP_CBAJ_T0089593.1 MGP_CBAJ_G0033638.1 mouse_genomes_project 8 103291784 103327503 + MGP_CBAJ_P0089593 Adgrg3 protein_coding protein_coding MGP_CBAJ_T0098106.1 MGP_CBAJ_G0036379.1 mouse_genomes_project 8 69047299 69047420 + Gm22586 rRNA rRNA MGP_CBAJ_T0088802.1 MGP_CBAJ_G0033392.1 mouse_genomes_project 8 76408209 76412102 - MGP_CBAJ_P0088802 Ifi30 protein_coding protein_coding MGP_CBAJ_T0088971.1 MGP_CBAJ_G0033444.1 mouse_genomes_project 8 78290212 78387263 - MGP_CBAJ_P0088971 Eps15l1 protein_coding protein_coding MGP_CBAJ_T0099540.1 MGP_CBAJ_G0037795.1 mouse_genomes_project 8 28064160 28064263 - Gm24202 snRNA snRNA MGP_CBAJ_T0009062.1 MGP_CBAJ_G0007272.1 mouse_genomes_project 8 102579645 102581347 + Gm15889 lincRNA lincRNA MGP_CBAJ_T0090110.1 MGP_CBAJ_G0033829.1 mouse_genomes_project 8 128788277 128835522 + MGP_CBAJ_P0090110 Bco1 protein_coding protein_coding MGP_CBAJ_T0090111.1 MGP_CBAJ_G0033829.1 mouse_genomes_project 8 128788288 128829882 + MGP_CBAJ_P0090111 Bco1 protein_coding protein_coding MGP_CBAJ_T0090112.1 MGP_CBAJ_G0033829.1 mouse_genomes_project 8 128788421 128832089 + MGP_CBAJ_P0090112 Bco1 protein_coding protein_coding MGP_CBAJ_T0011583.1 MGP_CBAJ_G0009721.1 mouse_genomes_project 8 5003179 5003378 + Gm27585 misc_RNA misc_RNA MGP_CBAJ_T0090147.1 MGP_CBAJ_G0033843.1 mouse_genomes_project 8 131619412 131638590 - MGP_CBAJ_P0090147 Hsdl1 protein_coding protein_coding MGP_CBAJ_T0090121.1 MGP_CBAJ_G0033835.1 mouse_genomes_project 8 129641017 129653806 - MGP_CBAJ_P0090121 Mphosph6 protein_coding protein_coding MGP_CBAJ_T0099578.1 MGP_CBAJ_G0037833.1 mouse_genomes_project 8 130345644 130345751 - Gm24035 snRNA snRNA MGP_CBAJ_T0089348.1 MGP_CBAJ_G0033562.1 mouse_genomes_project 8 92602929 92647440 - MGP_CBAJ_P0089348 Mylk3 protein_coding protein_coding MGP_CBAJ_T0089349.1 MGP_CBAJ_G0033562.1 mouse_genomes_project 8 92603073 92665775 - MGP_CBAJ_P0089349 Mylk3 protein_coding protein_coding MGP_CBAJ_T0089350.1 MGP_CBAJ_G0033562.1 mouse_genomes_project 8 92605680 92647463 - MGP_CBAJ_P0089350 Mylk3 protein_coding protein_coding MGP_CBAJ_T0089351.1 MGP_CBAJ_G0033562.1 mouse_genomes_project 8 92640452 92671131 - MGP_CBAJ_P0089351 Mylk3 protein_coding protein_coding MGP_CBAJ_T0089352.1 MGP_CBAJ_G0033562.1 mouse_genomes_project 8 92641627 92665831 - Mylk3 protein_coding retained_intron MGP_CBAJ_T0098502.1 MGP_CBAJ_G0036758.1 mouse_genomes_project 8 10458228 10515675 + Gm5607 sense_overlapping sense_overlapping MGP_CBAJ_T0098503.1 MGP_CBAJ_G0036758.1 mouse_genomes_project 8 10458228 10515696 + Gm5607 sense_overlapping sense_overlapping MGP_CBAJ_T0088961.1 MGP_CBAJ_G0033439.1 mouse_genomes_project 8 78108260 78122295 + MGP_CBAJ_P0088961 Hsh2d protein_coding protein_coding MGP_CBAJ_T0088962.1 MGP_CBAJ_G0033439.1 mouse_genomes_project 8 78114806 78122332 + MGP_CBAJ_P0088962 Hsh2d protein_coding protein_coding MGP_CBAJ_T0010895.1 MGP_CBAJ_G0009033.1 mouse_genomes_project 8 129338680 129338735 - Gm27361 miRNA miRNA MGP_CBAJ_T0088019.1 MGP_CBAJ_G0033149.1 mouse_genomes_project 8 25720871 25725698 + MGP_CBAJ_P0088019 Plpp5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088020.1 MGP_CBAJ_G0033149.1 mouse_genomes_project 8 25720871 25725698 + MGP_CBAJ_P0088020 Plpp5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088021.1 MGP_CBAJ_G0033149.1 mouse_genomes_project 8 25720874 25725698 + Plpp5 protein_coding retained_intron MGP_CBAJ_T0088022.1 MGP_CBAJ_G0033149.1 mouse_genomes_project 8 25720874 25725698 + MGP_CBAJ_P0088022 Plpp5 protein_coding protein_coding MGP_CBAJ_T0088023.1 MGP_CBAJ_G0033149.1 mouse_genomes_project 8 25720874 25725698 + MGP_CBAJ_P0088023 Plpp5 protein_coding protein_coding MGP_CBAJ_T0088024.1 MGP_CBAJ_G0033149.1 mouse_genomes_project 8 25720910 25722962 + Plpp5 protein_coding retained_intron MGP_CBAJ_T0088025.1 MGP_CBAJ_G0033149.1 mouse_genomes_project 8 25721192 25725694 + Plpp5 protein_coding retained_intron MGP_CBAJ_T0088026.1 MGP_CBAJ_G0033149.1 mouse_genomes_project 8 25721266 25725698 + Plpp5 protein_coding processed_transcript MGP_CBAJ_T0088027.1 MGP_CBAJ_G0033149.1 mouse_genomes_project 8 25723768 25725259 + Plpp5 protein_coding retained_intron MGP_CBAJ_T0099547.1 MGP_CBAJ_G0037802.1 mouse_genomes_project 8 53784791 53784854 + Gm23986 snRNA snRNA MGP_CBAJ_T0087779.1 MGP_CBAJ_G0033061.1 mouse_genomes_project 8 12345673 12347803 + MGP_CBAJ_P0087779 protein_coding protein_coding MGP_CBAJ_T0015751.1 MGP_CBAJ_G0013863.1 mouse_genomes_project 8 71731014 71731311 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0089772.1 MGP_CBAJ_G0033708.1 mouse_genomes_project 8 115372364 115425060 - MGP_CBAJ_P0089772 Atp6v0d1 protein_coding protein_coding MGP_CBAJ_T0089773.1 MGP_CBAJ_G0033708.1 mouse_genomes_project 8 115378550 115389053 - Atp6v0d1 protein_coding retained_intron MGP_CBAJ_T0088084.1 MGP_CBAJ_G0033178.1 mouse_genomes_project 8 31783714 31794128 + MGP_CBAJ_P0088084 Dusp26 protein_coding protein_coding MGP_CBAJ_T0088085.1 MGP_CBAJ_G0033178.1 mouse_genomes_project 8 31783879 31794127 + MGP_CBAJ_P0088085 Dusp26 protein_coding protein_coding MGP_CBAJ_T0088086.1 MGP_CBAJ_G0033178.1 mouse_genomes_project 8 31784045 31789288 + Dusp26 protein_coding retained_intron MGP_CBAJ_T0088087.1 MGP_CBAJ_G0033178.1 mouse_genomes_project 8 31788705 31794127 + MGP_CBAJ_P0088087 Dusp26 protein_coding protein_coding MGP_CBAJ_T0088088.1 MGP_CBAJ_G0033178.1 mouse_genomes_project 8 31791053 31793670 + Dusp26 protein_coding processed_transcript MGP_CBAJ_T0090382.1 MGP_CBAJ_G0033901.1 mouse_genomes_project 8 135805375 135843191 + MGP_CBAJ_P0090382 Dpep1 protein_coding protein_coding MGP_CBAJ_T0089945.1 MGP_CBAJ_G0033774.1 mouse_genomes_project 8 120456251 120473082 - MGP_CBAJ_P0089945 Marveld3 protein_coding protein_coding MGP_CBAJ_T0089946.1 MGP_CBAJ_G0033774.1 mouse_genomes_project 8 120461240 120473117 - MGP_CBAJ_P0089946 Marveld3 protein_coding protein_coding MGP_CBAJ_T0089947.1 MGP_CBAJ_G0033774.1 mouse_genomes_project 8 120470546 120472967 - Marveld3 protein_coding retained_intron MGP_CBAJ_T0090426.1 MGP_CBAJ_G0033913.1 mouse_genomes_project 8 136118799 136145029 + MGP_CBAJ_P0090426 Def8 protein_coding protein_coding MGP_CBAJ_T0090427.1 MGP_CBAJ_G0033913.1 mouse_genomes_project 8 136118799 136145029 + MGP_CBAJ_P0090427 Def8 protein_coding protein_coding MGP_CBAJ_T0090428.1 MGP_CBAJ_G0033913.1 mouse_genomes_project 8 136118799 136139081 + MGP_CBAJ_P0090428 Def8 protein_coding protein_coding MGP_CBAJ_T0090429.1 MGP_CBAJ_G0033913.1 mouse_genomes_project 8 136118809 136131411 + MGP_CBAJ_P0090429 Def8 protein_coding protein_coding MGP_CBAJ_T0090430.1 MGP_CBAJ_G0033913.1 mouse_genomes_project 8 136118818 136145029 + MGP_CBAJ_P0090430 Def8 protein_coding protein_coding MGP_CBAJ_T0090431.1 MGP_CBAJ_G0033913.1 mouse_genomes_project 8 136118821 136131347 + MGP_CBAJ_P0090431 Def8 protein_coding protein_coding MGP_CBAJ_T0090432.1 MGP_CBAJ_G0033913.1 mouse_genomes_project 8 136118825 136134069 + MGP_CBAJ_P0090432 Def8 protein_coding protein_coding MGP_CBAJ_T0090433.1 MGP_CBAJ_G0033913.1 mouse_genomes_project 8 136119121 136145021 + MGP_CBAJ_P0090433 Def8 protein_coding protein_coding MGP_CBAJ_T0089905.1 MGP_CBAJ_G0033759.1 mouse_genomes_project 8 117552691 117570175 - MGP_CBAJ_P0089905 Nob1 protein_coding protein_coding MGP_CBAJ_T0089906.1 MGP_CBAJ_G0033759.1 mouse_genomes_project 8 117552697 117561774 - Nob1 protein_coding retained_intron MGP_CBAJ_T0089907.1 MGP_CBAJ_G0033759.1 mouse_genomes_project 8 117552697 117570161 - MGP_CBAJ_P0089907 Nob1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089908.1 MGP_CBAJ_G0033759.1 mouse_genomes_project 8 117556449 117570106 - Nob1 protein_coding retained_intron MGP_CBAJ_T0089909.1 MGP_CBAJ_G0033759.1 mouse_genomes_project 8 117557906 117570171 - Nob1 protein_coding retained_intron MGP_CBAJ_T0089910.1 MGP_CBAJ_G0033759.1 mouse_genomes_project 8 117558267 117567447 - Nob1 protein_coding processed_transcript MGP_CBAJ_T0089911.1 MGP_CBAJ_G0033759.1 mouse_genomes_project 8 117558365 117558878 - Nob1 protein_coding retained_intron MGP_CBAJ_T0089912.1 MGP_CBAJ_G0033759.1 mouse_genomes_project 8 117558561 117570146 - MGP_CBAJ_P0089912 Nob1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0099536.1 MGP_CBAJ_G0037791.1 mouse_genomes_project 8 11450185 11450288 - Gm25014 snRNA snRNA MGP_CBAJ_T0090061.1 MGP_CBAJ_G0033812.1 mouse_genomes_project 8 123608731 123940184 + Cntnap4 protein_coding retained_intron MGP_CBAJ_T0090062.1 MGP_CBAJ_G0033812.1 mouse_genomes_project 8 123608731 123963353 + MGP_CBAJ_P0090062 Cntnap4 protein_coding protein_coding MGP_CBAJ_T0090063.1 MGP_CBAJ_G0033812.1 mouse_genomes_project 8 123608731 123963365 + MGP_CBAJ_P0090063 Cntnap4 protein_coding protein_coding MGP_CBAJ_T0090064.1 MGP_CBAJ_G0033812.1 mouse_genomes_project 8 123608743 123857977 + Cntnap4 protein_coding retained_intron MGP_CBAJ_T0090065.1 MGP_CBAJ_G0033812.1 mouse_genomes_project 8 123786384 123788914 + Cntnap4 protein_coding processed_transcript MGP_CBAJ_T0090066.1 MGP_CBAJ_G0033812.1 mouse_genomes_project 8 123837389 123862464 + Cntnap4 protein_coding processed_transcript MGP_CBAJ_T0015772.1 MGP_CBAJ_G0013884.1 mouse_genomes_project 8 96828625 96828950 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0087477.1 MGP_CBAJ_G0032969.1 mouse_genomes_project 8 54873 194904 - MGP_CBAJ_P0087477 Insr protein_coding protein_coding MGP_CBAJ_T0087478.1 MGP_CBAJ_G0032969.1 mouse_genomes_project 8 120620 194838 - Insr protein_coding retained_intron MGP_CBAJ_T0089056.1 MGP_CBAJ_G0033475.1 mouse_genomes_project 8 85917063 85933762 - MGP_CBAJ_P0089056 Mmaa protein_coding unknown_likely_coding MGP_CBAJ_T0089528.1 MGP_CBAJ_G0033616.1 mouse_genomes_project 8 102334004 102335580 + MGP_CBAJ_P0089528 Mt3 protein_coding protein_coding MGP_CBAJ_T0090310.1 MGP_CBAJ_G0033881.1 mouse_genomes_project 8 134948994 134950507 + MGP_CBAJ_P0090310 Il17c protein_coding protein_coding MGP_CBAJ_T0098107.1 MGP_CBAJ_G0036380.1 mouse_genomes_project 8 78020676 78020763 + Gm24747 rRNA rRNA MGP_CBAJ_T0099545.1 MGP_CBAJ_G0037800.1 mouse_genomes_project 8 48512131 48512257 - Gm25309 snRNA snRNA MGP_CBAJ_T0088231.1 MGP_CBAJ_G0033227.1 mouse_genomes_project 8 43306380 43403128 + MGP_CBAJ_P0088231 Pcm1 protein_coding unknown_likely_coding MGP_CBAJ_T0088232.1 MGP_CBAJ_G0033227.1 mouse_genomes_project 8 43306443 43405214 + MGP_CBAJ_P0088232 Pcm1 protein_coding protein_coding MGP_CBAJ_T0087479.1 MGP_CBAJ_G0032970.1 mouse_genomes_project 8 277503 326158 + MGP_CBAJ_P0087479 A430078G23Rik protein_coding protein_coding MGP_CBAJ_T0009051.1 MGP_CBAJ_G0007267.1 mouse_genomes_project 8 99945753 99968024 + Gm28516 lincRNA lincRNA MGP_CBAJ_T0089500.1 MGP_CBAJ_G0033610.1 mouse_genomes_project 8 101955406 102112854 + MGP_CBAJ_P0089500 Gnao1 protein_coding protein_coding MGP_CBAJ_T0089501.1 MGP_CBAJ_G0033610.1 mouse_genomes_project 8 101958542 101959674 + Gnao1 protein_coding retained_intron MGP_CBAJ_T0089502.1 MGP_CBAJ_G0033610.1 mouse_genomes_project 8 101958744 102131532 + MGP_CBAJ_P0089502 Gnao1 protein_coding protein_coding MGP_CBAJ_T0089503.1 MGP_CBAJ_G0033610.1 mouse_genomes_project 8 101958746 102131101 + MGP_CBAJ_P0089503 Gnao1 protein_coding protein_coding MGP_CBAJ_T0089504.1 MGP_CBAJ_G0033610.1 mouse_genomes_project 8 101959219 102119946 + Gnao1 protein_coding processed_transcript MGP_CBAJ_T0089505.1 MGP_CBAJ_G0033610.1 mouse_genomes_project 8 101959242 102122790 + MGP_CBAJ_P0089505 Gnao1 protein_coding unknown_likely_coding MGP_CBAJ_T0089506.1 MGP_CBAJ_G0033610.1 mouse_genomes_project 8 102046280 102130308 + MGP_CBAJ_P0089506 Gnao1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089507.1 MGP_CBAJ_G0033610.1 mouse_genomes_project 8 102111955 102113126 + Gnao1 protein_coding retained_intron MGP_CBAJ_T0089508.1 MGP_CBAJ_G0033610.1 mouse_genomes_project 8 102112855 102130205 + MGP_CBAJ_P0089508 Gnao1 protein_coding protein_coding MGP_CBAJ_T0089509.1 MGP_CBAJ_G0033610.1 mouse_genomes_project 8 102112855 102130226 + MGP_CBAJ_P0089509 Gnao1 protein_coding protein_coding MGP_CBAJ_T0089510.1 MGP_CBAJ_G0033610.1 mouse_genomes_project 8 102115395 102119029 + Gnao1 protein_coding processed_transcript MGP_CBAJ_T0089511.1 MGP_CBAJ_G0033610.1 mouse_genomes_project 8 102125004 102129166 + Gnao1 protein_coding retained_intron MGP_CBAJ_T0087948.1 MGP_CBAJ_G0033134.1 mouse_genomes_project 8 24243616 24245421 - MGP_CBAJ_P0087948 1810011O10Rik protein_coding protein_coding MGP_CBAJ_T0089854.1 MGP_CBAJ_G0033742.1 mouse_genomes_project 8 116476663 116486500 + MGP_CBAJ_P0089854 6030452D12Rik protein_coding protein_coding MGP_CBAJ_T0090191.1 MGP_CBAJ_G0033857.1 mouse_genomes_project 8 132331717 132345564 - MGP_CBAJ_P0090191 Fam92b protein_coding protein_coding MGP_CBAJ_T0090192.1 MGP_CBAJ_G0033857.1 mouse_genomes_project 8 132332706 132345461 - Fam92b protein_coding retained_intron MGP_CBAJ_T0090193.1 MGP_CBAJ_G0033857.1 mouse_genomes_project 8 132337060 132345525 - MGP_CBAJ_P0090193 Fam92b protein_coding protein_coding MGP_CBAJ_T0090194.1 MGP_CBAJ_G0033857.1 mouse_genomes_project 8 132342814 132345545 - Fam92b protein_coding retained_intron MGP_CBAJ_T0015717.1 MGP_CBAJ_G0013829.1 mouse_genomes_project 8 11102292 11102496 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0087864.1 MGP_CBAJ_G0033101.1 mouse_genomes_project 8 21391296 21392276 - MGP_CBAJ_P0087864 Defb11 protein_coding protein_coding MGP_CBAJ_T0090371.1 MGP_CBAJ_G0033899.1 mouse_genomes_project 8 135740713 135767881 + Cpne7 protein_coding retained_intron MGP_CBAJ_T0090372.1 MGP_CBAJ_G0033899.1 mouse_genomes_project 8 135740717 135767883 + MGP_CBAJ_P0090372 Cpne7 protein_coding protein_coding MGP_CBAJ_T0090373.1 MGP_CBAJ_G0033899.1 mouse_genomes_project 8 135740786 135767883 + Cpne7 protein_coding retained_intron MGP_CBAJ_T0090374.1 MGP_CBAJ_G0033899.1 mouse_genomes_project 8 135755491 135756348 + Cpne7 protein_coding processed_transcript MGP_CBAJ_T0090375.1 MGP_CBAJ_G0033899.1 mouse_genomes_project 8 135757597 135760867 + Cpne7 protein_coding retained_intron MGP_CBAJ_T0090502.1 MGP_CBAJ_G0033942.1 mouse_genomes_project 8 137967082 138210669 + MGP_CBAJ_P0090502 Disc1 protein_coding protein_coding MGP_CBAJ_T0090503.1 MGP_CBAJ_G0033942.1 mouse_genomes_project 8 137967082 138210669 + MGP_CBAJ_P0090503 Disc1 protein_coding protein_coding MGP_CBAJ_T0090504.1 MGP_CBAJ_G0033942.1 mouse_genomes_project 8 137967082 138211376 + MGP_CBAJ_P0090504 Disc1 protein_coding protein_coding MGP_CBAJ_T0090505.1 MGP_CBAJ_G0033942.1 mouse_genomes_project 8 137967082 138210669 + MGP_CBAJ_P0090505 Disc1 protein_coding protein_coding MGP_CBAJ_T0090506.1 MGP_CBAJ_G0033942.1 mouse_genomes_project 8 137967082 138210669 + MGP_CBAJ_P0090506 Disc1 protein_coding protein_coding MGP_CBAJ_T0090507.1 MGP_CBAJ_G0033942.1 mouse_genomes_project 8 137967082 138211376 + MGP_CBAJ_P0090507 Disc1 protein_coding protein_coding MGP_CBAJ_T0090508.1 MGP_CBAJ_G0033942.1 mouse_genomes_project 8 137967096 138008445 + MGP_CBAJ_P0090508 Disc1 protein_coding protein_coding MGP_CBAJ_T0090509.1 MGP_CBAJ_G0033942.1 mouse_genomes_project 8 137967117 138210666 + MGP_CBAJ_P0090509 Disc1 protein_coding protein_coding MGP_CBAJ_T0090510.1 MGP_CBAJ_G0033942.1 mouse_genomes_project 8 138005455 138020249 + Disc1 protein_coding processed_transcript MGP_CBAJ_T0009085.1 MGP_CBAJ_G0007290.1 mouse_genomes_project 8 133390418 133426319 - Fendrr lincRNA lincRNA MGP_CBAJ_T0009086.1 MGP_CBAJ_G0007290.1 mouse_genomes_project 8 133394456 133396067 - Fendrr lincRNA lincRNA MGP_CBAJ_T0009087.1 MGP_CBAJ_G0007290.1 mouse_genomes_project 8 133394772 133426397 - Fendrr lincRNA lincRNA MGP_CBAJ_T0089787.1 MGP_CBAJ_G0033713.1 mouse_genomes_project 8 115562315 115565273 - MGP_CBAJ_P0089787 Acd protein_coding protein_coding MGP_CBAJ_T0010829.1 MGP_CBAJ_G0008967.1 mouse_genomes_project 8 12639928 12640036 + Gm44347 miRNA miRNA MGP_CBAJ_T0088713.1 MGP_CBAJ_G0033366.1 mouse_genomes_project 8 75848629 75858209 - MGP_CBAJ_P0088713 Ddx49 protein_coding protein_coding MGP_CBAJ_T0088714.1 MGP_CBAJ_G0033366.1 mouse_genomes_project 8 75848640 75858172 - Ddx49 protein_coding retained_intron MGP_CBAJ_T0088715.1 MGP_CBAJ_G0033366.1 mouse_genomes_project 8 75849349 75851500 - Ddx49 protein_coding retained_intron MGP_CBAJ_T0088716.1 MGP_CBAJ_G0033366.1 mouse_genomes_project 8 75850560 75858195 - MGP_CBAJ_P0088716 Ddx49 protein_coding unknown_likely_coding MGP_CBAJ_T0088717.1 MGP_CBAJ_G0033366.1 mouse_genomes_project 8 75851582 75858183 - Ddx49 protein_coding retained_intron MGP_CBAJ_T0088718.1 MGP_CBAJ_G0033366.1 mouse_genomes_project 8 75856630 75858154 - Ddx49 protein_coding retained_intron MGP_CBAJ_T0088402.1 MGP_CBAJ_G0033278.1 mouse_genomes_project 8 58247884 58257420 - MGP_CBAJ_P0088402 Spcs3 protein_coding protein_coding MGP_CBAJ_T0100791.1 MGP_CBAJ_G0039046.1 mouse_genomes_project 8 24524508 24524632 + Gm26208 snoRNA snoRNA MGP_CBAJ_T0100824.1 MGP_CBAJ_G0039079.1 mouse_genomes_project 8 94421495 94421612 - Gm24781 snoRNA snoRNA MGP_CBAJ_T0090499.1 MGP_CBAJ_G0033939.1 mouse_genomes_project 8 137778077 137787443 + MGP_CBAJ_P0090499 Sprtn protein_coding protein_coding MGP_CBAJ_T0008989.1 MGP_CBAJ_G0007218.1 mouse_genomes_project 8 35088004 35094351 + Gm9951 lincRNA lincRNA MGP_CBAJ_T0008990.1 MGP_CBAJ_G0007218.1 mouse_genomes_project 8 35093124 35095566 + Gm9951 lincRNA lincRNA MGP_CBAJ_T0009027.1 MGP_CBAJ_G0007252.1 mouse_genomes_project 8 94549847 94559774 + Gm5118 lincRNA lincRNA MGP_CBAJ_T0099581.1 MGP_CBAJ_G0037836.1 mouse_genomes_project 8 135589034 135589141 - Gm24445 snRNA snRNA MGP_CBAJ_T0100790.1 MGP_CBAJ_G0039045.1 mouse_genomes_project 8 22952233 22952365 - Gm24335 snoRNA snoRNA MGP_CBAJ_T0099549.1 MGP_CBAJ_G0037804.1 mouse_genomes_project 8 57107236 57107298 + Gm27964 snRNA snRNA MGP_CBAJ_T0097852.1 MGP_CBAJ_G0036125.1 mouse_genomes_project 8 134972398 134974384 + pseudogene pseudogene MGP_CBAJ_T0088705.1 MGP_CBAJ_G0033365.1 mouse_genomes_project 8 75837984 75841471 + MGP_CBAJ_P0088705 Homer3 protein_coding protein_coding MGP_CBAJ_T0088706.1 MGP_CBAJ_G0033365.1 mouse_genomes_project 8 75837984 75850124 + MGP_CBAJ_P0088706 Homer3 protein_coding protein_coding MGP_CBAJ_T0088707.1 MGP_CBAJ_G0033365.1 mouse_genomes_project 8 75838156 75850124 + MGP_CBAJ_P0088707 Homer3 protein_coding protein_coding MGP_CBAJ_T0088708.1 MGP_CBAJ_G0033365.1 mouse_genomes_project 8 75838191 75841243 + Homer3 protein_coding retained_intron MGP_CBAJ_T0088709.1 MGP_CBAJ_G0033365.1 mouse_genomes_project 8 75840185 75850116 + MGP_CBAJ_P0088709 Homer3 protein_coding protein_coding MGP_CBAJ_T0088710.1 MGP_CBAJ_G0033365.1 mouse_genomes_project 8 75840871 75847503 + Homer3 protein_coding retained_intron MGP_CBAJ_T0088711.1 MGP_CBAJ_G0033365.1 mouse_genomes_project 8 75844928 75847368 + Homer3 protein_coding retained_intron MGP_CBAJ_T0088712.1 MGP_CBAJ_G0033365.1 mouse_genomes_project 8 75846839 75849233 + MGP_CBAJ_P0088712 Homer3 protein_coding protein_coding MGP_CBAJ_T0100781.1 MGP_CBAJ_G0039036.1 mouse_genomes_project 8 12108332 12108462 + Gm24698 snoRNA snoRNA MGP_CBAJ_T0089556.1 MGP_CBAJ_G0033627.1 mouse_genomes_project 8 102904689 102925979 - MGP_CBAJ_P0089556 Pllp protein_coding protein_coding MGP_CBAJ_T0018232.1 MGP_CBAJ_G0015466.1 mouse_genomes_project 8 116071506 116074207 + 1810019D21Rik processed_transcript processed_transcript MGP_CBAJ_T0018233.1 MGP_CBAJ_G0015466.1 mouse_genomes_project 8 116071541 116073998 + 1810019D21Rik processed_transcript processed_transcript MGP_CBAJ_T0018234.1 MGP_CBAJ_G0015466.1 mouse_genomes_project 8 116073171 116074632 + 1810019D21Rik processed_transcript processed_transcript MGP_CBAJ_T0089791.1 MGP_CBAJ_G0033716.1 mouse_genomes_project 8 115575108 115577062 + MGP_CBAJ_P0089791 4933405L10Rik protein_coding protein_coding MGP_CBAJ_T0011599.1 MGP_CBAJ_G0009737.1 mouse_genomes_project 8 115013732 115013821 + Gm24629 misc_RNA misc_RNA MGP_CBAJ_T0089230.1 MGP_CBAJ_G0033530.1 mouse_genomes_project 8 91949422 91952676 + MGP_CBAJ_P0089230 Lyl1 protein_coding protein_coding MGP_CBAJ_T0090452.1 MGP_CBAJ_G0033922.1 mouse_genomes_project 8 136635784 136696478 - MGP_CBAJ_P0090452 Nup133 protein_coding protein_coding MGP_CBAJ_T0089664.1 MGP_CBAJ_G0033664.1 mouse_genomes_project 8 113944216 113965763 - MGP_CBAJ_P0089664 Cmtm2a protein_coding protein_coding MGP_CBAJ_T0100800.1 MGP_CBAJ_G0039055.1 mouse_genomes_project 8 48197623 48197760 - Gm23604 snoRNA snoRNA MGP_CBAJ_T0097854.1 MGP_CBAJ_G0036127.1 mouse_genomes_project 8 136591791 136592794 + pseudogene pseudogene MGP_CBAJ_T0005271.1 MGP_CBAJ_G0004461.1 mouse_genomes_project 8 47552466 47557636 - Gm2366 antisense antisense MGP_CBAJ_T0087826.1 MGP_CBAJ_G0033071.1 mouse_genomes_project 8 17404423 17463398 - MGP_CBAJ_P0087826 Angpt2 protein_coding protein_coding MGP_CBAJ_T0087827.1 MGP_CBAJ_G0033071.1 mouse_genomes_project 8 17406251 17414273 - Angpt2 protein_coding processed_transcript MGP_CBAJ_T0009024.1 MGP_CBAJ_G0007249.1 mouse_genomes_project 8 94332546 94333425 + 2010110E17Rik lincRNA lincRNA MGP_CBAJ_T0100833.1 MGP_CBAJ_G0039088.1 mouse_genomes_project 8 121510935 121511024 - Snord111 snoRNA snoRNA MGP_CBAJ_T0089531.1 MGP_CBAJ_G0033619.1 mouse_genomes_project 8 102408381 102514281 + MGP_CBAJ_P0089531 Nup93 protein_coding protein_coding MGP_CBAJ_T0089532.1 MGP_CBAJ_G0033619.1 mouse_genomes_project 8 102425073 102514490 + MGP_CBAJ_P0089532 Nup93 protein_coding protein_coding MGP_CBAJ_T0089387.1 MGP_CBAJ_G0033572.1 mouse_genomes_project 8 94179888 94180793 + MGP_CBAJ_P0089387 Gm10638 protein_coding protein_coding MGP_CBAJ_T0090060.1 MGP_CBAJ_G0033811.1 mouse_genomes_project 8 122960429 122969011 + MGP_CBAJ_P0090060 Terf2ip protein_coding protein_coding MGP_CBAJ_T0090026.1 MGP_CBAJ_G0033799.1 mouse_genomes_project 8 122375967 122479757 + MGP_CBAJ_P0090026 Znrf1 protein_coding protein_coding MGP_CBAJ_T0090027.1 MGP_CBAJ_G0033799.1 mouse_genomes_project 8 122376496 122480067 + MGP_CBAJ_P0090027 Znrf1 protein_coding protein_coding MGP_CBAJ_T0090028.1 MGP_CBAJ_G0033799.1 mouse_genomes_project 8 122376496 122480067 + MGP_CBAJ_P0090028 Znrf1 protein_coding protein_coding MGP_CBAJ_T0090029.1 MGP_CBAJ_G0033799.1 mouse_genomes_project 8 122376698 122477815 + MGP_CBAJ_P0090029 Znrf1 protein_coding protein_coding MGP_CBAJ_T0090030.1 MGP_CBAJ_G0033799.1 mouse_genomes_project 8 122376976 122477010 + MGP_CBAJ_P0090030 Znrf1 protein_coding protein_coding MGP_CBAJ_T0090031.1 MGP_CBAJ_G0033799.1 mouse_genomes_project 8 122377126 122479763 + MGP_CBAJ_P0090031 Znrf1 protein_coding protein_coding MGP_CBAJ_T0090032.1 MGP_CBAJ_G0033799.1 mouse_genomes_project 8 122377319 122475973 + MGP_CBAJ_P0090032 Znrf1 protein_coding protein_coding MGP_CBAJ_T0090033.1 MGP_CBAJ_G0033799.1 mouse_genomes_project 8 122377343 122476538 + MGP_CBAJ_P0090033 Znrf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090034.1 MGP_CBAJ_G0033799.1 mouse_genomes_project 8 122378199 122476608 + MGP_CBAJ_P0090034 Znrf1 protein_coding protein_coding MGP_CBAJ_T0090035.1 MGP_CBAJ_G0033799.1 mouse_genomes_project 8 122378199 122480067 + MGP_CBAJ_P0090035 Znrf1 protein_coding protein_coding MGP_CBAJ_T0090036.1 MGP_CBAJ_G0033799.1 mouse_genomes_project 8 122378321 122463469 + Znrf1 protein_coding processed_transcript MGP_CBAJ_T0090037.1 MGP_CBAJ_G0033799.1 mouse_genomes_project 8 122381108 122475701 + MGP_CBAJ_P0090037 Znrf1 protein_coding protein_coding MGP_CBAJ_T0090038.1 MGP_CBAJ_G0033799.1 mouse_genomes_project 8 122408404 122460810 + Znrf1 protein_coding processed_transcript MGP_CBAJ_T0090039.1 MGP_CBAJ_G0033799.1 mouse_genomes_project 8 122460761 122476999 + MGP_CBAJ_P0090039 Znrf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090040.1 MGP_CBAJ_G0033799.1 mouse_genomes_project 8 122463400 122475812 + MGP_CBAJ_P0090040 Znrf1 protein_coding protein_coding MGP_CBAJ_T0089480.1 MGP_CBAJ_G0033603.1 mouse_genomes_project 8 101167407 101194206 - MGP_CBAJ_P0089480 Ces1c protein_coding protein_coding MGP_CBAJ_T0089481.1 MGP_CBAJ_G0033603.1 mouse_genomes_project 8 101174277 101194218 - Ces1c protein_coding retained_intron MGP_CBAJ_T0089482.1 MGP_CBAJ_G0033603.1 mouse_genomes_project 8 101175712 101187733 - MGP_CBAJ_P0089482 Ces1c protein_coding protein_coding MGP_CBAJ_T0089408.1 MGP_CBAJ_G0033579.1 mouse_genomes_project 8 95767278 95835006 + MGP_CBAJ_P0089408 Papd5 protein_coding protein_coding MGP_CBAJ_T0089409.1 MGP_CBAJ_G0033579.1 mouse_genomes_project 8 95767278 95835006 + MGP_CBAJ_P0089409 Papd5 protein_coding protein_coding MGP_CBAJ_T0089410.1 MGP_CBAJ_G0033579.1 mouse_genomes_project 8 95767279 95835037 + MGP_CBAJ_P0089410 Papd5 protein_coding protein_coding MGP_CBAJ_T0089411.1 MGP_CBAJ_G0033579.1 mouse_genomes_project 8 95821155 95825087 + Papd5 protein_coding retained_intron MGP_CBAJ_T0089412.1 MGP_CBAJ_G0033579.1 mouse_genomes_project 8 95827839 95833275 + MGP_CBAJ_P0089412 Papd5 protein_coding protein_coding MGP_CBAJ_T0099582.1 MGP_CBAJ_G0037837.1 mouse_genomes_project 8 137161224 137161310 + Gm24459 snRNA snRNA MGP_CBAJ_T0090387.1 MGP_CBAJ_G0033904.1 mouse_genomes_project 8 135874698 135886778 + MGP_CBAJ_P0090387 Cdk10 protein_coding protein_coding MGP_CBAJ_T0087867.1 MGP_CBAJ_G0033104.1 mouse_genomes_project 8 21453376 21455469 + MGP_CBAJ_P0087867 Defb13 protein_coding protein_coding MGP_CBAJ_T0088560.1 MGP_CBAJ_G0033326.1 mouse_genomes_project 8 73643383 73732738 + MGP_CBAJ_P0088560 Sh2d4a protein_coding protein_coding MGP_CBAJ_T0009089.1 MGP_CBAJ_G0007292.1 mouse_genomes_project 8 133625366 133745096 - Gm26815 lincRNA lincRNA MGP_CBAJ_T0010868.1 MGP_CBAJ_G0009006.1 mouse_genomes_project 8 93045368 93045485 + Mir8109 miRNA miRNA MGP_CBAJ_T0010839.1 MGP_CBAJ_G0008977.1 mouse_genomes_project 8 39985584 39985654 - Mir383 miRNA miRNA MGP_CBAJ_T0089468.1 MGP_CBAJ_G0033595.1 mouse_genomes_project 8 100328150 100334350 + MGP_CBAJ_P0089468 Irx5 protein_coding protein_coding MGP_CBAJ_T0089919.1 MGP_CBAJ_G0033765.1 mouse_genomes_project 8 120026875 120035028 + MGP_CBAJ_P0089919 Txnl4b protein_coding protein_coding MGP_CBAJ_T0089920.1 MGP_CBAJ_G0033765.1 mouse_genomes_project 8 120029864 120034500 + MGP_CBAJ_P0089920 Txnl4b protein_coding protein_coding MGP_CBAJ_T0089914.1 MGP_CBAJ_G0033761.1 mouse_genomes_project 8 117742573 117756074 - MGP_CBAJ_P0089914 Psmd7 protein_coding protein_coding MGP_CBAJ_T0005245.1 MGP_CBAJ_G0004443.1 mouse_genomes_project 8 9844439 9845862 - Gm15875 antisense antisense MGP_CBAJ_T0089527.1 MGP_CBAJ_G0033615.1 mouse_genomes_project 8 102312016 102313844 + MGP_CBAJ_P0089527 Mt4 protein_coding protein_coding MGP_CBAJ_T0018189.1 MGP_CBAJ_G0015448.1 mouse_genomes_project 8 10772464 10773767 + 4931415C17Rik processed_transcript processed_transcript MGP_CBAJ_T0018190.1 MGP_CBAJ_G0015448.1 mouse_genomes_project 8 10772705 10781264 + 4931415C17Rik processed_transcript processed_transcript MGP_CBAJ_T0089598.1 MGP_CBAJ_G0033642.1 mouse_genomes_project 8 103524517 103604903 - MGP_CBAJ_P0089598 Cngb1 protein_coding protein_coding MGP_CBAJ_T0089599.1 MGP_CBAJ_G0033642.1 mouse_genomes_project 8 103526453 103571688 - MGP_CBAJ_P0089599 Cngb1 protein_coding protein_coding MGP_CBAJ_T0089600.1 MGP_CBAJ_G0033642.1 mouse_genomes_project 8 103526459 103571708 - MGP_CBAJ_P0089600 Cngb1 protein_coding protein_coding MGP_CBAJ_T0089601.1 MGP_CBAJ_G0033642.1 mouse_genomes_project 8 103584319 103602177 - Cngb1 protein_coding retained_intron MGP_CBAJ_T0089602.1 MGP_CBAJ_G0033642.1 mouse_genomes_project 8 103584319 103602177 - Cngb1 protein_coding retained_intron MGP_CBAJ_T0089603.1 MGP_CBAJ_G0033642.1 mouse_genomes_project 8 103584319 103587433 - Cngb1 protein_coding retained_intron MGP_CBAJ_T0089604.1 MGP_CBAJ_G0033642.1 mouse_genomes_project 8 103584319 103604903 - MGP_CBAJ_P0089604 Cngb1 protein_coding protein_coding MGP_CBAJ_T0089605.1 MGP_CBAJ_G0033642.1 mouse_genomes_project 8 103584319 103591422 - MGP_CBAJ_P0089605 Cngb1 protein_coding protein_coding MGP_CBAJ_T0089606.1 MGP_CBAJ_G0033642.1 mouse_genomes_project 8 103584322 103604888 - Cngb1 protein_coding retained_intron MGP_CBAJ_T0089701.1 MGP_CBAJ_G0033681.1 mouse_genomes_project 8 114674443 114682856 + MGP_CBAJ_P0089701 Ces2e protein_coding protein_coding MGP_CBAJ_T0089702.1 MGP_CBAJ_G0033681.1 mouse_genomes_project 8 114674443 114682856 + MGP_CBAJ_P0089702 Ces2e protein_coding protein_coding MGP_CBAJ_T0088370.1 MGP_CBAJ_G0033266.1 mouse_genomes_project 8 50552659 50554322 + MGP_CBAJ_P0088370 protein_coding protein_coding MGP_CBAJ_T0088150.1 MGP_CBAJ_G0033205.1 mouse_genomes_project 8 36866841 36979602 + MGP_CBAJ_P0088150 Mfhas1 protein_coding protein_coding MGP_CBAJ_T0088151.1 MGP_CBAJ_G0033205.1 mouse_genomes_project 8 36886726 36977190 + Mfhas1 protein_coding processed_transcript MGP_CBAJ_T0088132.1 MGP_CBAJ_G0033196.1 mouse_genomes_project 8 35132241 35136985 - Dctn6 protein_coding retained_intron MGP_CBAJ_T0088133.1 MGP_CBAJ_G0033196.1 mouse_genomes_project 8 35132244 35149418 - MGP_CBAJ_P0088133 Dctn6 protein_coding protein_coding MGP_CBAJ_T0088134.1 MGP_CBAJ_G0033196.1 mouse_genomes_project 8 35132384 35149158 - MGP_CBAJ_P0088134 Dctn6 protein_coding protein_coding MGP_CBAJ_T0088135.1 MGP_CBAJ_G0033196.1 mouse_genomes_project 8 35132399 35148436 - Dctn6 protein_coding processed_transcript MGP_CBAJ_T0088136.1 MGP_CBAJ_G0033196.1 mouse_genomes_project 8 35132417 35146809 - MGP_CBAJ_P0088136 Dctn6 protein_coding protein_coding MGP_CBAJ_T0088137.1 MGP_CBAJ_G0033196.1 mouse_genomes_project 8 35132428 35134785 - Dctn6 protein_coding retained_intron MGP_CBAJ_T0088138.1 MGP_CBAJ_G0033196.1 mouse_genomes_project 8 35132459 35148474 - MGP_CBAJ_P0088138 Dctn6 protein_coding protein_coding MGP_CBAJ_T0088139.1 MGP_CBAJ_G0033196.1 mouse_genomes_project 8 35134370 35139301 - Dctn6 protein_coding retained_intron MGP_CBAJ_T0088140.1 MGP_CBAJ_G0033196.1 mouse_genomes_project 8 35136644 35149099 - Dctn6 protein_coding retained_intron MGP_CBAJ_T0088141.1 MGP_CBAJ_G0033196.1 mouse_genomes_project 8 35136858 35149085 - MGP_CBAJ_P0088141 Dctn6 protein_coding protein_coding MGP_CBAJ_T0087795.1 MGP_CBAJ_G0033065.1 mouse_genomes_project 8 13256363 13352191 + MGP_CBAJ_P0087795 Arhgef10 protein_coding protein_coding MGP_CBAJ_T0087796.1 MGP_CBAJ_G0033065.1 mouse_genomes_project 8 13256417 13272906 + Arhgef10 protein_coding retained_intron MGP_CBAJ_T0087797.1 MGP_CBAJ_G0033065.1 mouse_genomes_project 8 13256424 13311475 + MGP_CBAJ_P0087797 Arhgef10 protein_coding protein_coding MGP_CBAJ_T0087798.1 MGP_CBAJ_G0033065.1 mouse_genomes_project 8 13256438 13352191 + MGP_CBAJ_P0087798 Arhgef10 protein_coding protein_coding MGP_CBAJ_T0087799.1 MGP_CBAJ_G0033065.1 mouse_genomes_project 8 13293162 13352188 + MGP_CBAJ_P0087799 Arhgef10 protein_coding protein_coding MGP_CBAJ_T0087800.1 MGP_CBAJ_G0033065.1 mouse_genomes_project 8 13340653 13341414 + Arhgef10 protein_coding processed_transcript MGP_CBAJ_T0087801.1 MGP_CBAJ_G0033065.1 mouse_genomes_project 8 13346295 13352180 + Arhgef10 protein_coding processed_transcript MGP_CBAJ_T0015787.1 MGP_CBAJ_G0013899.1 mouse_genomes_project 8 136584239 136584606 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0087648.1 MGP_CBAJ_G0033023.1 mouse_genomes_project 8 9516444 9527023 + MGP_CBAJ_P0087648 Ing1 protein_coding protein_coding MGP_CBAJ_T0090155.1 MGP_CBAJ_G0033847.1 mouse_genomes_project 8 131696649 131708182 - MGP_CBAJ_P0090155 Kcng4 protein_coding protein_coding MGP_CBAJ_T0090156.1 MGP_CBAJ_G0033847.1 mouse_genomes_project 8 131696649 131708516 - MGP_CBAJ_P0090156 Kcng4 protein_coding protein_coding MGP_CBAJ_T0102231.1 MGP_CBAJ_G0040260.1 mouse_genomes_project 8 74015355 74015654 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010873.1 MGP_CBAJ_G0009011.1 mouse_genomes_project 8 102523734 102523805 + Mir138-2 miRNA miRNA MGP_CBAJ_T0090531.1 MGP_CBAJ_G0033951.1 mouse_genomes_project 8 139558135 139561077 + MGP_CBAJ_P0090531 Coa6 protein_coding protein_coding MGP_CBAJ_T0087629.1 MGP_CBAJ_G0033015.1 mouse_genomes_project 8 7758185 7791384 + MGP_CBAJ_P0087629 Tnfsf13b protein_coding protein_coding MGP_CBAJ_T0002294.1 MGP_CBAJ_G0002208.1 mouse_genomes_project 8 91444269 91446449 + TEC TEC MGP_CBAJ_T0089880.1 MGP_CBAJ_G0033753.1 mouse_genomes_project 8 117144165 117150114 + MGP_CBAJ_P0089880 Nip7 protein_coding protein_coding MGP_CBAJ_T0089881.1 MGP_CBAJ_G0033753.1 mouse_genomes_project 8 117144165 117150114 + MGP_CBAJ_P0089881 Nip7 protein_coding protein_coding MGP_CBAJ_T0097846.1 MGP_CBAJ_G0036119.1 mouse_genomes_project 8 96826242 96829118 - pseudogene pseudogene MGP_CBAJ_T0010886.1 MGP_CBAJ_G0009024.1 mouse_genomes_project 8 121117049 121117109 + miRNA miRNA MGP_CBAJ_T0089669.1 MGP_CBAJ_G0033667.1 mouse_genomes_project 8 114010436 114020622 + MGP_CBAJ_P0089669 Cmtm2b protein_coding protein_coding MGP_CBAJ_T0009081.1 MGP_CBAJ_G0007286.1 mouse_genomes_project 8 132842647 132843373 + Gm26739 lincRNA lincRNA MGP_CBAJ_T0005254.1 MGP_CBAJ_G0004448.1 mouse_genomes_project 8 11207718 11214382 + Gm17023 antisense antisense MGP_CBAJ_T0005258.1 MGP_CBAJ_G0004452.1 mouse_genomes_project 8 14896303 14899029 + Gm16347 antisense antisense MGP_CBAJ_T0005259.1 MGP_CBAJ_G0004452.1 mouse_genomes_project 8 14896314 14900166 + Gm16347 antisense antisense MGP_CBAJ_T0090057.1 MGP_CBAJ_G0033810.1 mouse_genomes_project 8 122942065 122960359 - MGP_CBAJ_P0090057 Kars protein_coding protein_coding MGP_CBAJ_T0090058.1 MGP_CBAJ_G0033810.1 mouse_genomes_project 8 122942069 122960394 - MGP_CBAJ_P0090058 Kars protein_coding protein_coding MGP_CBAJ_T0090059.1 MGP_CBAJ_G0033810.1 mouse_genomes_project 8 122942069 122960337 - MGP_CBAJ_P0090059 Kars protein_coding protein_coding MGP_CBAJ_T0009080.1 MGP_CBAJ_G0007285.1 mouse_genomes_project 8 132833656 132837897 + Gm10614 lincRNA lincRNA MGP_CBAJ_T0090274.1 MGP_CBAJ_G0033875.1 mouse_genomes_project 8 134361460 134391000 - MGP_CBAJ_P0090274 Slc7a5 protein_coding protein_coding MGP_CBAJ_T0090275.1 MGP_CBAJ_G0033875.1 mouse_genomes_project 8 134363112 134364225 - Slc7a5 protein_coding retained_intron MGP_CBAJ_T0090276.1 MGP_CBAJ_G0033875.1 mouse_genomes_project 8 134368684 134379808 - Slc7a5 protein_coding processed_transcript MGP_CBAJ_T0089586.1 MGP_CBAJ_G0033636.1 mouse_genomes_project 8 103176542 103191384 + MGP_CBAJ_P0089586 Adgrg5 protein_coding protein_coding MGP_CBAJ_T0089587.1 MGP_CBAJ_G0033636.1 mouse_genomes_project 8 103176542 103200182 + MGP_CBAJ_P0089587 Adgrg5 protein_coding protein_coding MGP_CBAJ_T0089588.1 MGP_CBAJ_G0033636.1 mouse_genomes_project 8 103176542 103200192 + MGP_CBAJ_P0089588 Adgrg5 protein_coding protein_coding MGP_CBAJ_T0089589.1 MGP_CBAJ_G0033636.1 mouse_genomes_project 8 103176547 103200182 + MGP_CBAJ_P0089589 Adgrg5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089590.1 MGP_CBAJ_G0033636.1 mouse_genomes_project 8 103191034 103191952 + Adgrg5 protein_coding processed_transcript MGP_CBAJ_T0089809.1 MGP_CBAJ_G0033725.1 mouse_genomes_project 8 115797923 115834133 + MGP_CBAJ_P0089809 Pskh1 protein_coding protein_coding MGP_CBAJ_T0088585.1 MGP_CBAJ_G0033331.1 mouse_genomes_project 8 74525147 74549967 + MGP_CBAJ_P0088585 Atp6v1b2 protein_coding protein_coding MGP_CBAJ_T0088586.1 MGP_CBAJ_G0033331.1 mouse_genomes_project 8 74525269 74543621 + Atp6v1b2 protein_coding retained_intron MGP_CBAJ_T0088587.1 MGP_CBAJ_G0033331.1 mouse_genomes_project 8 74525288 74538401 + Atp6v1b2 protein_coding retained_intron MGP_CBAJ_T0088588.1 MGP_CBAJ_G0033331.1 mouse_genomes_project 8 74525290 74532762 + Atp6v1b2 protein_coding retained_intron MGP_CBAJ_T0088589.1 MGP_CBAJ_G0033331.1 mouse_genomes_project 8 74538364 74539216 + Atp6v1b2 protein_coding retained_intron MGP_CBAJ_T0088590.1 MGP_CBAJ_G0033331.1 mouse_genomes_project 8 74539280 74544598 + Atp6v1b2 protein_coding retained_intron MGP_CBAJ_T0098110.1 MGP_CBAJ_G0036383.1 mouse_genomes_project 8 140863151 140863269 + Gm22968 rRNA rRNA MGP_CBAJ_T0089246.1 MGP_CBAJ_G0033535.1 mouse_genomes_project 8 92088716 92093806 - MGP_CBAJ_P0089246 Calr protein_coding protein_coding MGP_CBAJ_T0089247.1 MGP_CBAJ_G0033535.1 mouse_genomes_project 8 92089461 92091785 - Calr protein_coding retained_intron MGP_CBAJ_T0089248.1 MGP_CBAJ_G0033535.1 mouse_genomes_project 8 92092305 92093702 - Calr protein_coding retained_intron MGP_CBAJ_T0089249.1 MGP_CBAJ_G0033535.1 mouse_genomes_project 8 92092619 92093698 - Calr protein_coding retained_intron MGP_CBAJ_T0005321.1 MGP_CBAJ_G0004505.1 mouse_genomes_project 8 135281837 135284138 + Gm10612 antisense antisense MGP_CBAJ_T0089487.1 MGP_CBAJ_G0033605.1 mouse_genomes_project 8 101276458 101311142 - MGP_CBAJ_P0089487 Ces1e protein_coding protein_coding MGP_CBAJ_T0089488.1 MGP_CBAJ_G0033605.1 mouse_genomes_project 8 101276644 101311141 - MGP_CBAJ_P0089488 Ces1e protein_coding protein_coding MGP_CBAJ_T0089489.1 MGP_CBAJ_G0033605.1 mouse_genomes_project 8 101285451 101294640 - Ces1e protein_coding retained_intron MGP_CBAJ_T0009001.1 MGP_CBAJ_G0007229.1 mouse_genomes_project 8 61344033 61352741 + lincRNA lincRNA MGP_CBAJ_T0087883.1 MGP_CBAJ_G0033111.1 mouse_genomes_project 8 21678800 21699472 - MGP_CBAJ_P0087883 Ckap2 protein_coding protein_coding MGP_CBAJ_T0010858.1 MGP_CBAJ_G0008996.1 mouse_genomes_project 8 91422684 91422756 - Mir181d miRNA miRNA MGP_CBAJ_T0005297.1 MGP_CBAJ_G0004484.1 mouse_genomes_project 8 113824692 113831480 - Gm10631 antisense antisense MGP_CBAJ_T0015730.1 MGP_CBAJ_G0013842.1 mouse_genomes_project 8 21267138 21267579 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0088349.1 MGP_CBAJ_G0033260.1 mouse_genomes_project 8 49799617 49847041 + Enpp6 protein_coding retained_intron MGP_CBAJ_T0088350.1 MGP_CBAJ_G0033260.1 mouse_genomes_project 8 49799619 49913572 + Enpp6 protein_coding retained_intron MGP_CBAJ_T0088351.1 MGP_CBAJ_G0033260.1 mouse_genomes_project 8 49799619 49913572 + MGP_CBAJ_P0088351 Enpp6 protein_coding protein_coding MGP_CBAJ_T0088352.1 MGP_CBAJ_G0033260.1 mouse_genomes_project 8 49799646 49906869 + MGP_CBAJ_P0088352 Enpp6 protein_coding protein_coding MGP_CBAJ_T0088353.1 MGP_CBAJ_G0033260.1 mouse_genomes_project 8 49890986 49907579 + MGP_CBAJ_P0088353 Enpp6 protein_coding protein_coding MGP_CBAJ_T0090250.1 MGP_CBAJ_G0033870.1 mouse_genomes_project 8 133972987 134009495 - MGP_CBAJ_P0090250 Fbxo31 protein_coding protein_coding MGP_CBAJ_T0090251.1 MGP_CBAJ_G0033870.1 mouse_genomes_project 8 133977546 133986026 - Fbxo31 protein_coding processed_transcript MGP_CBAJ_T0090252.1 MGP_CBAJ_G0033870.1 mouse_genomes_project 8 133979170 133986916 - Fbxo31 protein_coding retained_intron MGP_CBAJ_T0089199.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91931513 91935970 + Trmt1 protein_coding retained_intron MGP_CBAJ_T0089200.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91931525 91932300 + Trmt1 protein_coding processed_transcript MGP_CBAJ_T0089201.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91931545 91936356 + MGP_CBAJ_P0089201 Trmt1 protein_coding protein_coding MGP_CBAJ_T0089202.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91933894 91947709 + MGP_CBAJ_P0089202 Trmt1 protein_coding protein_coding MGP_CBAJ_T0089203.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91934275 91947688 + MGP_CBAJ_P0089203 Trmt1 protein_coding protein_coding MGP_CBAJ_T0089204.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91934285 91935773 + Trmt1 protein_coding processed_transcript MGP_CBAJ_T0089205.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91934285 91936404 + Trmt1 protein_coding retained_intron MGP_CBAJ_T0089206.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91934285 91943428 + MGP_CBAJ_P0089206 Trmt1 protein_coding protein_coding MGP_CBAJ_T0089207.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91934292 91947687 + MGP_CBAJ_P0089207 Trmt1 protein_coding protein_coding MGP_CBAJ_T0089208.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91934297 91944818 + MGP_CBAJ_P0089208 Trmt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089209.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91934300 91943199 + MGP_CBAJ_P0089209 Trmt1 protein_coding protein_coding MGP_CBAJ_T0089210.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91934311 91947709 + Trmt1 protein_coding retained_intron MGP_CBAJ_T0089211.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91934311 91936262 + Trmt1 protein_coding retained_intron MGP_CBAJ_T0089212.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91934312 91935845 + Trmt1 protein_coding retained_intron MGP_CBAJ_T0089213.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91934313 91935007 + Trmt1 protein_coding retained_intron MGP_CBAJ_T0089214.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91934314 91935842 + Trmt1 protein_coding processed_transcript MGP_CBAJ_T0089215.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91934314 91943371 + MGP_CBAJ_P0089215 Trmt1 protein_coding protein_coding MGP_CBAJ_T0089216.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91934314 91943347 + MGP_CBAJ_P0089216 Trmt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089217.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91934317 91939514 + Trmt1 protein_coding processed_transcript MGP_CBAJ_T0089218.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91934496 91947686 + MGP_CBAJ_P0089218 Trmt1 protein_coding protein_coding MGP_CBAJ_T0089219.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91934509 91943137 + MGP_CBAJ_P0089219 Trmt1 protein_coding protein_coding MGP_CBAJ_T0089220.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91934664 91943428 + Trmt1 protein_coding processed_transcript MGP_CBAJ_T0089221.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91935422 91945025 + Trmt1 protein_coding processed_transcript MGP_CBAJ_T0089222.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91942819 91945329 + Trmt1 protein_coding retained_intron MGP_CBAJ_T0089223.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91944736 91945414 + Trmt1 protein_coding retained_intron MGP_CBAJ_T0089224.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91944867 91946153 + MGP_CBAJ_P0089224 Trmt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089225.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91945214 91945847 + Trmt1 protein_coding retained_intron MGP_CBAJ_T0089226.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91946289 91947687 + MGP_CBAJ_P0089226 Trmt1 protein_coding protein_coding MGP_CBAJ_T0089227.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91946971 91947687 + Trmt1 protein_coding retained_intron MGP_CBAJ_T0089228.1 MGP_CBAJ_G0033528.1 mouse_genomes_project 8 91947081 91947552 + Trmt1 protein_coding retained_intron MGP_CBAJ_T0089904.1 MGP_CBAJ_G0033758.1 mouse_genomes_project 8 117528380 117543421 - MGP_CBAJ_P0089904 Nqo1 protein_coding protein_coding MGP_CBAJ_T0018235.1 MGP_CBAJ_G0015467.1 mouse_genomes_project 8 121871809 121888918 - 9430091E24Rik processed_transcript processed_transcript MGP_CBAJ_T0089774.1 MGP_CBAJ_G0033709.1 mouse_genomes_project 8 115425710 115497289 - MGP_CBAJ_P0089774 Agrp protein_coding protein_coding MGP_CBAJ_T0089775.1 MGP_CBAJ_G0033709.1 mouse_genomes_project 8 115425710 115427311 - MGP_CBAJ_P0089775 Agrp protein_coding protein_coding MGP_CBAJ_T0089776.1 MGP_CBAJ_G0033709.1 mouse_genomes_project 8 115425810 115438776 - MGP_CBAJ_P0089776 Agrp protein_coding protein_coding MGP_CBAJ_T0100801.1 MGP_CBAJ_G0039056.1 mouse_genomes_project 8 48197624 48197756 - Gm23604 snoRNA snoRNA MGP_CBAJ_T0018200.1 MGP_CBAJ_G0015455.1 mouse_genomes_project 8 48355439 48370166 + processed_transcript processed_transcript MGP_CBAJ_T0088323.1 MGP_CBAJ_G0033253.1 mouse_genomes_project 8 48910376 48914864 - MGP_CBAJ_P0088323 Slc25a4 protein_coding protein_coding MGP_CBAJ_T0088324.1 MGP_CBAJ_G0033253.1 mouse_genomes_project 8 48911549 48914610 - Slc25a4 protein_coding retained_intron MGP_CBAJ_T0088810.1 MGP_CBAJ_G0033395.1 mouse_genomes_project 8 76453962 76466836 + MGP_CBAJ_P0088810 Il12rb1 protein_coding protein_coding MGP_CBAJ_T0089716.1 MGP_CBAJ_G0033688.1 mouse_genomes_project 8 115037225 115065143 + MGP_CBAJ_P0089716 D230025D16Rik protein_coding protein_coding MGP_CBAJ_T0089717.1 MGP_CBAJ_G0033688.1 mouse_genomes_project 8 115037286 115063215 + D230025D16Rik protein_coding retained_intron MGP_CBAJ_T0089718.1 MGP_CBAJ_G0033688.1 mouse_genomes_project 8 115037286 115064846 + MGP_CBAJ_P0089718 D230025D16Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0089719.1 MGP_CBAJ_G0033688.1 mouse_genomes_project 8 115037347 115065143 + MGP_CBAJ_P0089719 D230025D16Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0089720.1 MGP_CBAJ_G0033688.1 mouse_genomes_project 8 115043121 115052273 + MGP_CBAJ_P0089720 D230025D16Rik protein_coding protein_coding MGP_CBAJ_T0089721.1 MGP_CBAJ_G0033688.1 mouse_genomes_project 8 115058582 115063855 + D230025D16Rik protein_coding retained_intron MGP_CBAJ_T0005263.1 MGP_CBAJ_G0004455.1 mouse_genomes_project 8 22780578 22793449 - Gm15816 antisense antisense MGP_CBAJ_T0089950.1 MGP_CBAJ_G0033776.1 mouse_genomes_project 8 120546697 120564426 - MGP_CBAJ_P0089950 Chst4 protein_coding protein_coding MGP_CBAJ_T0089937.1 MGP_CBAJ_G0033771.1 mouse_genomes_project 8 120210343 120221635 - MGP_CBAJ_P0089937 Atxn1l protein_coding protein_coding MGP_CBAJ_T0005292.1 MGP_CBAJ_G0004479.1 mouse_genomes_project 8 91852593 91858532 - Gm16183 antisense antisense MGP_CBAJ_T0088660.1 MGP_CBAJ_G0033359.1 mouse_genomes_project 8 75694098 75703120 + MGP_CBAJ_P0088660 protein_coding protein_coding MGP_CBAJ_T0088661.1 MGP_CBAJ_G0033359.1 mouse_genomes_project 8 75694300 75701406 + protein_coding retained_intron MGP_CBAJ_T0088662.1 MGP_CBAJ_G0033359.1 mouse_genomes_project 8 75694304 75724968 + MGP_CBAJ_P0088662 protein_coding protein_coding MGP_CBAJ_T0088663.1 MGP_CBAJ_G0033359.1 mouse_genomes_project 8 75694306 75701420 + MGP_CBAJ_P0088663 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088664.1 MGP_CBAJ_G0033359.1 mouse_genomes_project 8 75694316 75703125 + MGP_CBAJ_P0088664 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088665.1 MGP_CBAJ_G0033359.1 mouse_genomes_project 8 75694870 75703183 + MGP_CBAJ_P0088665 protein_coding protein_coding MGP_CBAJ_T0090521.1 MGP_CBAJ_G0033946.1 mouse_genomes_project 8 138765709 138932648 - MGP_CBAJ_P0090521 Pcnx2 protein_coding protein_coding MGP_CBAJ_T0090522.1 MGP_CBAJ_G0033946.1 mouse_genomes_project 8 138765710 138872026 - Pcnx2 protein_coding retained_intron MGP_CBAJ_T0090523.1 MGP_CBAJ_G0033946.1 mouse_genomes_project 8 138765712 138788324 - Pcnx2 protein_coding retained_intron MGP_CBAJ_T0090524.1 MGP_CBAJ_G0033946.1 mouse_genomes_project 8 138856394 138858239 - Pcnx2 protein_coding retained_intron MGP_CBAJ_T0090525.1 MGP_CBAJ_G0033946.1 mouse_genomes_project 8 138869782 138932648 - MGP_CBAJ_P0090525 Pcnx2 protein_coding protein_coding MGP_CBAJ_T0090526.1 MGP_CBAJ_G0033946.1 mouse_genomes_project 8 138893387 138932606 - Pcnx2 protein_coding processed_transcript MGP_CBAJ_T0088404.1 MGP_CBAJ_G0033280.1 mouse_genomes_project 8 58336418 58347534 + MGP_CBAJ_P0088404 Spata4 protein_coding protein_coding MGP_CBAJ_T0090501.1 MGP_CBAJ_G0033941.1 mouse_genomes_project 8 137925865 137946954 + MGP_CBAJ_P0090501 Tsnax protein_coding protein_coding MGP_CBAJ_T0089825.1 MGP_CBAJ_G0033733.1 mouse_genomes_project 8 115921481 115923743 - MGP_CBAJ_P0089825 Ddx28 protein_coding protein_coding MGP_CBAJ_T0005289.1 MGP_CBAJ_G0004477.1 mouse_genomes_project 8 83958567 83962646 + 0610038B21Rik antisense antisense MGP_CBAJ_T0005290.1 MGP_CBAJ_G0004477.1 mouse_genomes_project 8 83962181 83968048 + 0610038B21Rik antisense antisense MGP_CBAJ_T0088148.1 MGP_CBAJ_G0033203.1 mouse_genomes_project 8 36644728 36662150 + MGP_CBAJ_P0088148 Ppp1r3b protein_coding protein_coding MGP_CBAJ_T0090440.1 MGP_CBAJ_G0033915.1 mouse_genomes_project 8 136192100 136202826 - MGP_CBAJ_P0090440 Dbndd1 protein_coding protein_coding MGP_CBAJ_T0090441.1 MGP_CBAJ_G0033915.1 mouse_genomes_project 8 136193069 136202761 - MGP_CBAJ_P0090441 Dbndd1 protein_coding protein_coding MGP_CBAJ_T0090442.1 MGP_CBAJ_G0033915.1 mouse_genomes_project 8 136193069 136202834 - MGP_CBAJ_P0090442 Dbndd1 protein_coding protein_coding MGP_CBAJ_T0087633.1 MGP_CBAJ_G0033018.1 mouse_genomes_project 8 9104963 9226379 - MGP_CBAJ_P0087633 Col4a1 protein_coding protein_coding MGP_CBAJ_T0087634.1 MGP_CBAJ_G0033018.1 mouse_genomes_project 8 9118932 9123333 - Col4a1 protein_coding processed_transcript MGP_CBAJ_T0089534.1 MGP_CBAJ_G0033621.1 mouse_genomes_project 8 102588166 102597105 + MGP_CBAJ_P0089534 Herpud1 protein_coding protein_coding MGP_CBAJ_T0089535.1 MGP_CBAJ_G0033621.1 mouse_genomes_project 8 102588223 102597086 + MGP_CBAJ_P0089535 Herpud1 protein_coding protein_coding MGP_CBAJ_T0089536.1 MGP_CBAJ_G0033621.1 mouse_genomes_project 8 102589281 102594190 + Herpud1 protein_coding processed_transcript MGP_CBAJ_T0089537.1 MGP_CBAJ_G0033621.1 mouse_genomes_project 8 102589327 102594030 + Herpud1 protein_coding processed_transcript MGP_CBAJ_T0089538.1 MGP_CBAJ_G0033621.1 mouse_genomes_project 8 102595254 102596637 + Herpud1 protein_coding retained_intron MGP_CBAJ_T0087968.1 MGP_CBAJ_G0033139.1 mouse_genomes_project 8 24584673 24663144 - MGP_CBAJ_P0087968 Adam5 protein_coding protein_coding MGP_CBAJ_T0087969.1 MGP_CBAJ_G0033139.1 mouse_genomes_project 8 24584673 24669303 - MGP_CBAJ_P0087969 Adam5 protein_coding protein_coding MGP_CBAJ_T0087970.1 MGP_CBAJ_G0033139.1 mouse_genomes_project 8 24584782 24669229 - Adam5 protein_coding processed_transcript MGP_CBAJ_T0087971.1 MGP_CBAJ_G0033139.1 mouse_genomes_project 8 24593122 24669613 - MGP_CBAJ_P0087971 Adam5 protein_coding protein_coding MGP_CBAJ_T0089499.1 MGP_CBAJ_G0033609.1 mouse_genomes_project 8 101616157 101654469 - MGP_CBAJ_P0089499 Ces5a protein_coding protein_coding MGP_CBAJ_T0089343.1 MGP_CBAJ_G0033557.1 mouse_genomes_project 8 92352769 92367581 + MGP_CBAJ_P0089343 Man2b1 protein_coding protein_coding MGP_CBAJ_T0010882.1 MGP_CBAJ_G0009020.1 mouse_genomes_project 8 115853989 115854052 - Mir7074 miRNA miRNA MGP_CBAJ_T0015767.1 MGP_CBAJ_G0013879.1 mouse_genomes_project 8 89680682 89681640 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0089496.1 MGP_CBAJ_G0033607.1 mouse_genomes_project 8 101389580 101438987 - MGP_CBAJ_P0089496 Ces1g protein_coding protein_coding MGP_CBAJ_T0089497.1 MGP_CBAJ_G0033607.1 mouse_genomes_project 8 101392287 101438836 - MGP_CBAJ_P0089497 Ces1g protein_coding unknown_likely_coding MGP_CBAJ_T0089557.1 MGP_CBAJ_G0033628.1 mouse_genomes_project 8 102980364 102986456 + MGP_CBAJ_P0089557 Ccl22 protein_coding protein_coding MGP_CBAJ_T0089558.1 MGP_CBAJ_G0033628.1 mouse_genomes_project 8 102980454 102984630 + Ccl22 protein_coding processed_transcript MGP_CBAJ_T0088933.1 MGP_CBAJ_G0033431.1 mouse_genomes_project 8 77715593 77728801 + MGP_CBAJ_P0088933 Zfp709 protein_coding protein_coding MGP_CBAJ_T0088934.1 MGP_CBAJ_G0033431.1 mouse_genomes_project 8 77715941 77716308 + Zfp709 protein_coding processed_transcript MGP_CBAJ_T0089619.1 MGP_CBAJ_G0033648.1 mouse_genomes_project 8 103743799 103787674 - MGP_CBAJ_P0089619 Csnk2a2 protein_coding protein_coding MGP_CBAJ_T0088262.1 MGP_CBAJ_G0033243.1 mouse_genomes_project 8 47991067 48007840 - MGP_CBAJ_P0088262 Tlr3 protein_coding protein_coding MGP_CBAJ_T0088263.1 MGP_CBAJ_G0033243.1 mouse_genomes_project 8 47991313 48007909 - MGP_CBAJ_P0088263 Tlr3 protein_coding protein_coding MGP_CBAJ_T0090390.1 MGP_CBAJ_G0033906.1 mouse_genomes_project 8 135902594 135918183 - Vps9d1 protein_coding retained_intron MGP_CBAJ_T0090391.1 MGP_CBAJ_G0033906.1 mouse_genomes_project 8 135902594 135918137 - MGP_CBAJ_P0090391 Vps9d1 protein_coding protein_coding MGP_CBAJ_T0090392.1 MGP_CBAJ_G0033906.1 mouse_genomes_project 8 135902594 135918309 - MGP_CBAJ_P0090392 Vps9d1 protein_coding protein_coding MGP_CBAJ_T0090393.1 MGP_CBAJ_G0033906.1 mouse_genomes_project 8 135902596 135918124 - Vps9d1 protein_coding retained_intron MGP_CBAJ_T0090394.1 MGP_CBAJ_G0033906.1 mouse_genomes_project 8 135902596 135918070 - MGP_CBAJ_P0090394 Vps9d1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090395.1 MGP_CBAJ_G0033906.1 mouse_genomes_project 8 135902597 135918053 - MGP_CBAJ_P0090395 Vps9d1 protein_coding protein_coding MGP_CBAJ_T0090396.1 MGP_CBAJ_G0033906.1 mouse_genomes_project 8 135905185 135918066 - Vps9d1 protein_coding retained_intron MGP_CBAJ_T0090397.1 MGP_CBAJ_G0033906.1 mouse_genomes_project 8 135905381 135907169 - Vps9d1 protein_coding processed_transcript MGP_CBAJ_T0090398.1 MGP_CBAJ_G0033906.1 mouse_genomes_project 8 135906754 135908235 - Vps9d1 protein_coding processed_transcript MGP_CBAJ_T0090399.1 MGP_CBAJ_G0033906.1 mouse_genomes_project 8 135907095 135908252 - Vps9d1 protein_coding retained_intron MGP_CBAJ_T0090400.1 MGP_CBAJ_G0033906.1 mouse_genomes_project 8 135908791 135909222 - Vps9d1 protein_coding retained_intron MGP_CBAJ_T0090401.1 MGP_CBAJ_G0033906.1 mouse_genomes_project 8 135909066 135915005 - Vps9d1 protein_coding retained_intron MGP_CBAJ_T0090402.1 MGP_CBAJ_G0033906.1 mouse_genomes_project 8 135909950 135918011 - Vps9d1 protein_coding retained_intron MGP_CBAJ_T0018201.1 MGP_CBAJ_G0015456.1 mouse_genomes_project 8 51882479 51920174 + Gm19744 processed_transcript lincRNA MGP_CBAJ_T0018202.1 MGP_CBAJ_G0015456.1 mouse_genomes_project 8 51882530 51886295 + Gm19744 processed_transcript lincRNA MGP_CBAJ_T0018203.1 MGP_CBAJ_G0015456.1 mouse_genomes_project 8 51882605 51883918 + Gm19744 processed_transcript antisense MGP_CBAJ_T0018204.1 MGP_CBAJ_G0015456.1 mouse_genomes_project 8 51882849 51883323 + Gm19744 processed_transcript retained_intron MGP_CBAJ_T0018205.1 MGP_CBAJ_G0015456.1 mouse_genomes_project 8 51882911 51883417 + Gm19744 processed_transcript antisense MGP_CBAJ_T0018206.1 MGP_CBAJ_G0015456.1 mouse_genomes_project 8 51901435 51921059 + Gm19744 processed_transcript lincRNA MGP_CBAJ_T0009033.1 MGP_CBAJ_G0007257.1 mouse_genomes_project 8 94946262 94947254 + 4930535O05Rik lincRNA lincRNA MGP_CBAJ_T0087830.1 MGP_CBAJ_G0033073.1 mouse_genomes_project 8 17687516 17708738 - Xkr5 protein_coding processed_transcript MGP_CBAJ_T0087831.1 MGP_CBAJ_G0033073.1 mouse_genomes_project 8 17687516 17708842 - MGP_CBAJ_P0087831 Xkr5 protein_coding protein_coding MGP_CBAJ_T0087832.1 MGP_CBAJ_G0033073.1 mouse_genomes_project 8 17687516 17708840 - MGP_CBAJ_P0087832 Xkr5 protein_coding protein_coding MGP_CBAJ_T0087833.1 MGP_CBAJ_G0033073.1 mouse_genomes_project 8 17687519 17708783 - MGP_CBAJ_P0087833 Xkr5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087834.1 MGP_CBAJ_G0033073.1 mouse_genomes_project 8 17687875 17708804 - MGP_CBAJ_P0087834 Xkr5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0100821.1 MGP_CBAJ_G0039076.1 mouse_genomes_project 8 91623323 91623456 - Gm23626 snoRNA snoRNA MGP_CBAJ_T0088719.1 MGP_CBAJ_G0033367.1 mouse_genomes_project 8 75858237 75871262 + MGP_CBAJ_P0088719 Cope protein_coding protein_coding MGP_CBAJ_T0088720.1 MGP_CBAJ_G0033367.1 mouse_genomes_project 8 75858460 75862139 + Cope protein_coding retained_intron MGP_CBAJ_T0088721.1 MGP_CBAJ_G0033367.1 mouse_genomes_project 8 75858488 75871265 + Cope protein_coding retained_intron MGP_CBAJ_T0088722.1 MGP_CBAJ_G0033367.1 mouse_genomes_project 8 75858492 75866200 + MGP_CBAJ_P0088722 Cope protein_coding protein_coding MGP_CBAJ_T0088723.1 MGP_CBAJ_G0033367.1 mouse_genomes_project 8 75858512 75862644 + Cope protein_coding retained_intron MGP_CBAJ_T0088724.1 MGP_CBAJ_G0033367.1 mouse_genomes_project 8 75858515 75871044 + MGP_CBAJ_P0088724 Cope protein_coding nonsense_mediated_decay MGP_CBAJ_T0088725.1 MGP_CBAJ_G0033367.1 mouse_genomes_project 8 75861417 75871262 + MGP_CBAJ_P0088725 Cope protein_coding protein_coding MGP_CBAJ_T0088726.1 MGP_CBAJ_G0033367.1 mouse_genomes_project 8 75864226 75871262 + MGP_CBAJ_P0088726 Cope protein_coding protein_coding MGP_CBAJ_T0089621.1 MGP_CBAJ_G0033650.1 mouse_genomes_project 8 103885368 103901572 - MGP_CBAJ_P0089621 Prss54 protein_coding protein_coding MGP_CBAJ_T0089622.1 MGP_CBAJ_G0033650.1 mouse_genomes_project 8 103885527 103901310 - MGP_CBAJ_P0089622 Prss54 protein_coding protein_coding MGP_CBAJ_T0088149.1 MGP_CBAJ_G0033204.1 mouse_genomes_project 8 36747371 36771493 - MGP_CBAJ_P0088149 Eri1 protein_coding protein_coding MGP_CBAJ_T0089251.1 MGP_CBAJ_G0033537.1 mouse_genomes_project 8 92103728 92115784 + MGP_CBAJ_P0089251 Farsa protein_coding protein_coding MGP_CBAJ_T0089252.1 MGP_CBAJ_G0033537.1 mouse_genomes_project 8 92103734 92115783 + Farsa protein_coding retained_intron MGP_CBAJ_T0089253.1 MGP_CBAJ_G0033537.1 mouse_genomes_project 8 92103748 92113549 + Farsa protein_coding retained_intron MGP_CBAJ_T0089254.1 MGP_CBAJ_G0033537.1 mouse_genomes_project 8 92103756 92115784 + MGP_CBAJ_P0089254 Farsa protein_coding protein_coding MGP_CBAJ_T0089255.1 MGP_CBAJ_G0033537.1 mouse_genomes_project 8 92103759 92115783 + MGP_CBAJ_P0089255 Farsa protein_coding nonsense_mediated_decay MGP_CBAJ_T0089256.1 MGP_CBAJ_G0033537.1 mouse_genomes_project 8 92114089 92115537 + Farsa protein_coding retained_intron MGP_CBAJ_T0090264.1 MGP_CBAJ_G0033874.1 mouse_genomes_project 8 134266486 134294234 - MGP_CBAJ_P0090264 Klhdc4 protein_coding protein_coding MGP_CBAJ_T0090265.1 MGP_CBAJ_G0033874.1 mouse_genomes_project 8 134266506 134294205 - Klhdc4 protein_coding retained_intron MGP_CBAJ_T0090266.1 MGP_CBAJ_G0033874.1 mouse_genomes_project 8 134266517 134267602 - Klhdc4 protein_coding retained_intron MGP_CBAJ_T0090267.1 MGP_CBAJ_G0033874.1 mouse_genomes_project 8 134266720 134294145 - MGP_CBAJ_P0090267 Klhdc4 protein_coding protein_coding MGP_CBAJ_T0090268.1 MGP_CBAJ_G0033874.1 mouse_genomes_project 8 134266720 134294145 - MGP_CBAJ_P0090268 Klhdc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090269.1 MGP_CBAJ_G0033874.1 mouse_genomes_project 8 134266720 134294145 - MGP_CBAJ_P0090269 Klhdc4 protein_coding protein_coding MGP_CBAJ_T0090270.1 MGP_CBAJ_G0033874.1 mouse_genomes_project 8 134268356 134275494 - Klhdc4 protein_coding processed_transcript MGP_CBAJ_T0090271.1 MGP_CBAJ_G0033874.1 mouse_genomes_project 8 134269658 134271773 - Klhdc4 protein_coding retained_intron MGP_CBAJ_T0090272.1 MGP_CBAJ_G0033874.1 mouse_genomes_project 8 134291181 134294174 - Klhdc4 protein_coding retained_intron MGP_CBAJ_T0090273.1 MGP_CBAJ_G0033874.1 mouse_genomes_project 8 134291475 134294169 - MGP_CBAJ_P0090273 Klhdc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0015716.1 MGP_CBAJ_G0013828.1 mouse_genomes_project 8 8670464 8670905 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0089031.1 MGP_CBAJ_G0033467.1 mouse_genomes_project 8 84138253 84220688 - MGP_CBAJ_P0089031 Ednra protein_coding protein_coding MGP_CBAJ_T0089032.1 MGP_CBAJ_G0033467.1 mouse_genomes_project 8 84147779 84220716 - Ednra protein_coding retained_intron MGP_CBAJ_T0087571.1 MGP_CBAJ_G0032995.1 mouse_genomes_project 8 1288234 1301383 + MGP_CBAJ_P0087571 Lrrc8e protein_coding protein_coding MGP_CBAJ_T0090511.1 MGP_CBAJ_G0033943.1 mouse_genomes_project 8 138394199 138479428 - MGP_CBAJ_P0090511 Sipa1l2 protein_coding protein_coding MGP_CBAJ_T0089703.1 MGP_CBAJ_G0033682.1 mouse_genomes_project 8 114695537 114704054 + MGP_CBAJ_P0089703 Ces2f protein_coding protein_coding MGP_CBAJ_T0089159.1 MGP_CBAJ_G0033513.1 mouse_genomes_project 8 91308145 91309724 - MGP_CBAJ_P0089159 Gm10643 protein_coding protein_coding MGP_CBAJ_T0089143.1 MGP_CBAJ_G0033506.1 mouse_genomes_project 8 91207732 91231500 + MGP_CBAJ_P0089143 Prkaca protein_coding protein_coding MGP_CBAJ_T0087546.1 MGP_CBAJ_G0032990.1 mouse_genomes_project 8 901610 908314 - MGP_CBAJ_P0087546 Cd209d protein_coding protein_coding MGP_CBAJ_T0088390.1 MGP_CBAJ_G0033274.1 mouse_genomes_project 8 52450853 52457194 + protein_coding processed_transcript MGP_CBAJ_T0088391.1 MGP_CBAJ_G0033274.1 mouse_genomes_project 8 52450880 52593813 + MGP_CBAJ_P0088391 protein_coding protein_coding MGP_CBAJ_T0088392.1 MGP_CBAJ_G0033274.1 mouse_genomes_project 8 52548568 52593780 + MGP_CBAJ_P0088392 protein_coding protein_coding MGP_CBAJ_T0088393.1 MGP_CBAJ_G0033274.1 mouse_genomes_project 8 52573733 52615594 + protein_coding processed_transcript MGP_CBAJ_T0097840.1 MGP_CBAJ_G0036113.1 mouse_genomes_project 8 7609962 7610312 - pseudogene pseudogene MGP_CBAJ_T0089117.1 MGP_CBAJ_G0033500.1 mouse_genomes_project 8 90862861 90874933 + MGP_CBAJ_P0089117 Gipc1 protein_coding protein_coding MGP_CBAJ_T0088213.1 MGP_CBAJ_G0033224.1 mouse_genomes_project 8 42979057 42995148 + Pdgfrl protein_coding retained_intron MGP_CBAJ_T0088214.1 MGP_CBAJ_G0033224.1 mouse_genomes_project 8 42979073 43043680 + MGP_CBAJ_P0088214 Pdgfrl protein_coding protein_coding MGP_CBAJ_T0090140.1 MGP_CBAJ_G0033841.1 mouse_genomes_project 8 131523711 131554805 - MGP_CBAJ_P0090140 Slc38a8 protein_coding protein_coding MGP_CBAJ_T0090141.1 MGP_CBAJ_G0033841.1 mouse_genomes_project 8 131529630 131546607 - MGP_CBAJ_P0090141 Slc38a8 protein_coding protein_coding MGP_CBAJ_T0090142.1 MGP_CBAJ_G0033841.1 mouse_genomes_project 8 131530208 131541937 - Slc38a8 protein_coding retained_intron MGP_CBAJ_T0090143.1 MGP_CBAJ_G0033841.1 mouse_genomes_project 8 131541241 131554401 - MGP_CBAJ_P0090143 Slc38a8 protein_coding protein_coding MGP_CBAJ_T0090144.1 MGP_CBAJ_G0033841.1 mouse_genomes_project 8 131545704 131554802 - MGP_CBAJ_P0090144 Slc38a8 protein_coding protein_coding MGP_CBAJ_T0099567.1 MGP_CBAJ_G0037822.1 mouse_genomes_project 8 105794396 105794498 + Gm25160 snRNA snRNA MGP_CBAJ_T0089952.1 MGP_CBAJ_G0033778.1 mouse_genomes_project 8 120611792 120640048 - MGP_CBAJ_P0089952 Gm17720 protein_coding protein_coding MGP_CBAJ_T0100828.1 MGP_CBAJ_G0039083.1 mouse_genomes_project 8 104121067 104121200 - Gm26265 snoRNA snoRNA MGP_CBAJ_T0088421.1 MGP_CBAJ_G0033286.1 mouse_genomes_project 8 60446493 60465510 - MGP_CBAJ_P0088421 Cep44 protein_coding protein_coding MGP_CBAJ_T0088422.1 MGP_CBAJ_G0033286.1 mouse_genomes_project 8 60446493 60460132 - MGP_CBAJ_P0088422 Cep44 protein_coding protein_coding MGP_CBAJ_T0088423.1 MGP_CBAJ_G0033286.1 mouse_genomes_project 8 60457573 60465496 - MGP_CBAJ_P0088423 Cep44 protein_coding protein_coding MGP_CBAJ_T0088424.1 MGP_CBAJ_G0033286.1 mouse_genomes_project 8 60458860 60465452 - MGP_CBAJ_P0088424 Cep44 protein_coding protein_coding MGP_CBAJ_T0088425.1 MGP_CBAJ_G0033286.1 mouse_genomes_project 8 60458927 60465525 - MGP_CBAJ_P0088425 Cep44 protein_coding protein_coding MGP_CBAJ_T0088426.1 MGP_CBAJ_G0033286.1 mouse_genomes_project 8 60460118 60465700 - MGP_CBAJ_P0088426 Cep44 protein_coding protein_coding MGP_CBAJ_T0088427.1 MGP_CBAJ_G0033286.1 mouse_genomes_project 8 60463634 60464911 - Cep44 protein_coding processed_transcript MGP_CBAJ_T0088428.1 MGP_CBAJ_G0033286.1 mouse_genomes_project 8 60463982 60465456 - Cep44 protein_coding processed_transcript MGP_CBAJ_T0089617.1 MGP_CBAJ_G0033646.1 mouse_genomes_project 8 103652163 103674193 + MGP_CBAJ_P0089617 Mmp15 protein_coding protein_coding MGP_CBAJ_T0088326.1 MGP_CBAJ_G0033255.1 mouse_genomes_project 8 49188695 49257244 + MGP_CBAJ_P0088326 Acsl1 protein_coding protein_coding MGP_CBAJ_T0088327.1 MGP_CBAJ_G0033255.1 mouse_genomes_project 8 49188753 49235807 + Acsl1 protein_coding retained_intron MGP_CBAJ_T0088328.1 MGP_CBAJ_G0033255.1 mouse_genomes_project 8 49188831 49230567 + MGP_CBAJ_P0088328 Acsl1 protein_coding protein_coding MGP_CBAJ_T0088329.1 MGP_CBAJ_G0033255.1 mouse_genomes_project 8 49210121 49256774 + MGP_CBAJ_P0088329 Acsl1 protein_coding protein_coding MGP_CBAJ_T0088330.1 MGP_CBAJ_G0033255.1 mouse_genomes_project 8 49210121 49224856 + MGP_CBAJ_P0088330 Acsl1 protein_coding protein_coding MGP_CBAJ_T0088331.1 MGP_CBAJ_G0033255.1 mouse_genomes_project 8 49211979 49255673 + MGP_CBAJ_P0088331 Acsl1 protein_coding protein_coding MGP_CBAJ_T0088332.1 MGP_CBAJ_G0033255.1 mouse_genomes_project 8 49247978 49249845 + Acsl1 protein_coding retained_intron MGP_CBAJ_T0088333.1 MGP_CBAJ_G0033255.1 mouse_genomes_project 8 49252256 49255648 + MGP_CBAJ_P0088333 Acsl1 protein_coding protein_coding MGP_CBAJ_T0002301.1 MGP_CBAJ_G0002214.1 mouse_genomes_project 8 119211453 119213157 + TEC TEC MGP_CBAJ_T0010819.1 MGP_CBAJ_G0008957.1 mouse_genomes_project 8 2919152 2919221 + Gm22565 miRNA miRNA MGP_CBAJ_T0088120.1 MGP_CBAJ_G0033194.1 mouse_genomes_project 8 34753568 34759218 - MGP_CBAJ_P0088120 Smim18 protein_coding protein_coding MGP_CBAJ_T0005314.1 MGP_CBAJ_G0004498.1 mouse_genomes_project 8 127150988 127157057 + antisense antisense MGP_CBAJ_T0088738.1 MGP_CBAJ_G0033372.1 mouse_genomes_project 8 76025605 76055668 - MGP_CBAJ_P0088738 Klhl26 protein_coding protein_coding MGP_CBAJ_T0088739.1 MGP_CBAJ_G0033372.1 mouse_genomes_project 8 76025605 76055668 - MGP_CBAJ_P0088739 Klhl26 protein_coding protein_coding MGP_CBAJ_T0088508.1 MGP_CBAJ_G0033306.1 mouse_genomes_project 8 68762381 68786386 - MGP_CBAJ_P0088508 Sgol2b protein_coding protein_coding MGP_CBAJ_T0015771.1 MGP_CBAJ_G0013883.1 mouse_genomes_project 8 93230199 93231262 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0089149.1 MGP_CBAJ_G0033509.1 mouse_genomes_project 8 91251328 91253265 - MGP_CBAJ_P0089149 2210011C24Rik protein_coding protein_coding MGP_CBAJ_T0089150.1 MGP_CBAJ_G0033509.1 mouse_genomes_project 8 91251345 91252518 - MGP_CBAJ_P0089150 2210011C24Rik protein_coding protein_coding MGP_CBAJ_T0089151.1 MGP_CBAJ_G0033509.1 mouse_genomes_project 8 91251873 91252518 - MGP_CBAJ_P0089151 2210011C24Rik protein_coding protein_coding MGP_CBAJ_T0089152.1 MGP_CBAJ_G0033509.1 mouse_genomes_project 8 91252550 91253278 - MGP_CBAJ_P0089152 2210011C24Rik protein_coding protein_coding MGP_CBAJ_T0089153.1 MGP_CBAJ_G0033509.1 mouse_genomes_project 8 91252558 91253263 - MGP_CBAJ_P0089153 2210011C24Rik protein_coding protein_coding MGP_CBAJ_T0087521.1 MGP_CBAJ_G0032982.1 mouse_genomes_project 8 632710 648213 + MGP_CBAJ_P0087521 Stxbp2 protein_coding protein_coding MGP_CBAJ_T0087522.1 MGP_CBAJ_G0032982.1 mouse_genomes_project 8 632907 639974 + Stxbp2 protein_coding processed_transcript MGP_CBAJ_T0087523.1 MGP_CBAJ_G0032982.1 mouse_genomes_project 8 632908 635680 + Stxbp2 protein_coding processed_transcript MGP_CBAJ_T0087524.1 MGP_CBAJ_G0032982.1 mouse_genomes_project 8 632908 640119 + Stxbp2 protein_coding processed_transcript MGP_CBAJ_T0087525.1 MGP_CBAJ_G0032982.1 mouse_genomes_project 8 632912 636491 + Stxbp2 protein_coding retained_intron MGP_CBAJ_T0087526.1 MGP_CBAJ_G0032982.1 mouse_genomes_project 8 632920 640222 + Stxbp2 protein_coding retained_intron MGP_CBAJ_T0087527.1 MGP_CBAJ_G0032982.1 mouse_genomes_project 8 632925 647364 + MGP_CBAJ_P0087527 Stxbp2 protein_coding protein_coding MGP_CBAJ_T0087528.1 MGP_CBAJ_G0032982.1 mouse_genomes_project 8 634670 635822 + Stxbp2 protein_coding retained_intron MGP_CBAJ_T0087529.1 MGP_CBAJ_G0032982.1 mouse_genomes_project 8 639895 640199 + Stxbp2 protein_coding retained_intron MGP_CBAJ_T0087530.1 MGP_CBAJ_G0032982.1 mouse_genomes_project 8 641645 645573 + Stxbp2 protein_coding processed_transcript MGP_CBAJ_T0087531.1 MGP_CBAJ_G0032982.1 mouse_genomes_project 8 644053 647363 + Stxbp2 protein_coding processed_transcript MGP_CBAJ_T0087532.1 MGP_CBAJ_G0032982.1 mouse_genomes_project 8 645275 646506 + Stxbp2 protein_coding retained_intron MGP_CBAJ_T0087533.1 MGP_CBAJ_G0032982.1 mouse_genomes_project 8 645332 646591 + Stxbp2 protein_coding retained_intron MGP_CBAJ_T0087534.1 MGP_CBAJ_G0032982.1 mouse_genomes_project 8 645405 647357 + Stxbp2 protein_coding retained_intron MGP_CBAJ_T0087535.1 MGP_CBAJ_G0032982.1 mouse_genomes_project 8 646180 647364 + Stxbp2 protein_coding retained_intron MGP_CBAJ_T0100805.1 MGP_CBAJ_G0039060.1 mouse_genomes_project 8 60436537 60436669 - Gm24375 snoRNA snoRNA MGP_CBAJ_T0010902.1 MGP_CBAJ_G0009040.1 mouse_genomes_project 8 135759080 135759147 + Mir7080 miRNA miRNA MGP_CBAJ_T0010853.1 MGP_CBAJ_G0008991.1 mouse_genomes_project 8 79015609 79015689 + Mir28b miRNA miRNA MGP_CBAJ_T0010850.1 MGP_CBAJ_G0008988.1 mouse_genomes_project 8 76592764 76592858 + Mir1969 miRNA miRNA MGP_CBAJ_T0010847.1 MGP_CBAJ_G0008985.1 mouse_genomes_project 8 75657282 75657345 - Mir7066 miRNA miRNA MGP_CBAJ_T0090500.1 MGP_CBAJ_G0033940.1 mouse_genomes_project 8 137793251 137835386 - MGP_CBAJ_P0090500 protein_coding protein_coding MGP_CBAJ_T0087778.1 MGP_CBAJ_G0033060.1 mouse_genomes_project 8 12276136 12345540 - MGP_CBAJ_P0087778 Erich1 protein_coding protein_coding MGP_CBAJ_T0099558.1 MGP_CBAJ_G0037813.1 mouse_genomes_project 8 83584263 83584435 + Gm23260 snRNA snRNA MGP_CBAJ_T0090049.1 MGP_CBAJ_G0033805.1 mouse_genomes_project 8 122776900 122795722 - MGP_CBAJ_P0090049 Tmem170 protein_coding protein_coding MGP_CBAJ_T0087771.1 MGP_CBAJ_G0033058.1 mouse_genomes_project 8 12145286 12176922 + MGP_CBAJ_P0087771 Fbxo25 protein_coding unknown_likely_coding MGP_CBAJ_T0087772.1 MGP_CBAJ_G0033058.1 mouse_genomes_project 8 12145295 12177791 + MGP_CBAJ_P0087772 Fbxo25 protein_coding protein_coding MGP_CBAJ_T0087802.1 MGP_CBAJ_G0033066.1 mouse_genomes_project 8 13362127 13384438 + MGP_CBAJ_P0087802 Kbtbd11 protein_coding protein_coding MGP_CBAJ_T0087803.1 MGP_CBAJ_G0033066.1 mouse_genomes_project 8 13362418 13378198 + Kbtbd11 protein_coding processed_transcript MGP_CBAJ_T0087804.1 MGP_CBAJ_G0033066.1 mouse_genomes_project 8 13378394 13384438 + MGP_CBAJ_P0087804 Kbtbd11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087805.1 MGP_CBAJ_G0033066.1 mouse_genomes_project 8 13383494 13384069 + Kbtbd11 protein_coding processed_transcript MGP_CBAJ_T0088544.1 MGP_CBAJ_G0033319.1 mouse_genomes_project 8 71820964 71829058 - MGP_CBAJ_P0088544 Npy5r protein_coding protein_coding MGP_CBAJ_T0009023.1 MGP_CBAJ_G0007248.1 mouse_genomes_project 8 91908113 91912423 + Gm26664 lincRNA lincRNA MGP_CBAJ_T0102226.1 MGP_CBAJ_G0040255.1 mouse_genomes_project 8 18320411 18321350 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010891.1 MGP_CBAJ_G0009029.1 mouse_genomes_project 8 122264270 122264393 + Mir1957b miRNA miRNA MGP_CBAJ_T0010852.1 MGP_CBAJ_G0008990.1 mouse_genomes_project 8 78445027 78445101 - Mir7068 miRNA miRNA MGP_CBAJ_T0008998.1 MGP_CBAJ_G0007226.1 mouse_genomes_project 8 49487966 49496500 - lincRNA lincRNA MGP_CBAJ_T0002290.1 MGP_CBAJ_G0002204.1 mouse_genomes_project 8 13375427 13379527 - TEC TEC MGP_CBAJ_T0087728.1 MGP_CBAJ_G0033040.1 mouse_genomes_project 8 11303126 11322004 + MGP_CBAJ_P0087728 Lamp1 protein_coding protein_coding MGP_CBAJ_T0009072.1 MGP_CBAJ_G0007279.1 mouse_genomes_project 8 116584322 116591780 + 1110028F18Rik lincRNA lincRNA MGP_CBAJ_T0087846.1 MGP_CBAJ_G0033084.1 mouse_genomes_project 8 18016437 18021556 + MGP_CBAJ_P0087846 Defb6 protein_coding protein_coding MGP_CBAJ_T0088596.1 MGP_CBAJ_G0033333.1 mouse_genomes_project 8 74650866 74676650 + MGP_CBAJ_P0088596 Zfp930 protein_coding unknown_likely_coding MGP_CBAJ_T0088597.1 MGP_CBAJ_G0033333.1 mouse_genomes_project 8 74672446 74675084 + MGP_CBAJ_P0088597 Zfp930 protein_coding protein_coding MGP_CBAJ_T0088417.1 MGP_CBAJ_G0033283.1 mouse_genomes_project 8 59687634 59732253 - MGP_CBAJ_P0088417 Adam29 protein_coding protein_coding MGP_CBAJ_T0089559.1 MGP_CBAJ_G0033629.1 mouse_genomes_project 8 103006749 103013683 + Cx3cl1 protein_coding processed_transcript MGP_CBAJ_T0089560.1 MGP_CBAJ_G0033629.1 mouse_genomes_project 8 103006749 103017156 + MGP_CBAJ_P0089560 Cx3cl1 protein_coding protein_coding MGP_CBAJ_T0089561.1 MGP_CBAJ_G0033629.1 mouse_genomes_project 8 103006944 103014376 + MGP_CBAJ_P0089561 Cx3cl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089562.1 MGP_CBAJ_G0033629.1 mouse_genomes_project 8 103006965 103014760 + MGP_CBAJ_P0089562 Cx3cl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089922.1 MGP_CBAJ_G0033767.1 mouse_genomes_project 8 120057743 120072558 - MGP_CBAJ_P0089922 Dhodh protein_coding nonsense_mediated_decay MGP_CBAJ_T0089923.1 MGP_CBAJ_G0033767.1 mouse_genomes_project 8 120059647 120060452 - Dhodh protein_coding processed_transcript MGP_CBAJ_T0089924.1 MGP_CBAJ_G0033767.1 mouse_genomes_project 8 120059873 120074698 - MGP_CBAJ_P0089924 Dhodh protein_coding protein_coding MGP_CBAJ_T0089925.1 MGP_CBAJ_G0033767.1 mouse_genomes_project 8 120059877 120074949 - MGP_CBAJ_P0089925 Dhodh protein_coding protein_coding MGP_CBAJ_T0089926.1 MGP_CBAJ_G0033767.1 mouse_genomes_project 8 120060301 120062683 - Dhodh protein_coding retained_intron MGP_CBAJ_T0089927.1 MGP_CBAJ_G0033767.1 mouse_genomes_project 8 120060373 120061351 - Dhodh protein_coding retained_intron MGP_CBAJ_T0089928.1 MGP_CBAJ_G0033767.1 mouse_genomes_project 8 120060446 120067849 - Dhodh protein_coding retained_intron MGP_CBAJ_T0089929.1 MGP_CBAJ_G0033767.1 mouse_genomes_project 8 120062430 120074692 - MGP_CBAJ_P0089929 Dhodh protein_coding nonsense_mediated_decay MGP_CBAJ_T0089930.1 MGP_CBAJ_G0033767.1 mouse_genomes_project 8 120067657 120074746 - Dhodh protein_coding retained_intron MGP_CBAJ_T0089931.1 MGP_CBAJ_G0033767.1 mouse_genomes_project 8 120067668 120074746 - Dhodh protein_coding retained_intron MGP_CBAJ_T0089932.1 MGP_CBAJ_G0033767.1 mouse_genomes_project 8 120069640 120074999 - MGP_CBAJ_P0089932 Dhodh protein_coding protein_coding MGP_CBAJ_T0010831.1 MGP_CBAJ_G0008969.1 mouse_genomes_project 8 18533565 18533655 - Gm27852 miRNA miRNA MGP_CBAJ_T0090339.1 MGP_CBAJ_G0033891.1 mouse_genomes_project 8 135168465 135172428 + MGP_CBAJ_P0090339 Trappc2l protein_coding protein_coding MGP_CBAJ_T0090069.1 MGP_CBAJ_G0033814.1 mouse_genomes_project 8 124828179 124840286 + MGP_CBAJ_P0090069 Syce1l protein_coding protein_coding MGP_CBAJ_T0090070.1 MGP_CBAJ_G0033814.1 mouse_genomes_project 8 124828179 124840286 + MGP_CBAJ_P0090070 Syce1l protein_coding protein_coding MGP_CBAJ_T0009032.1 MGP_CBAJ_G0007256.1 mouse_genomes_project 8 94833548 94852118 - Gm27207 lincRNA lincRNA MGP_CBAJ_T0087838.1 MGP_CBAJ_G0033077.1 mouse_genomes_project 8 17827176 17836989 - MGP_CBAJ_P0087838 Defb39 protein_coding protein_coding MGP_CBAJ_T0100779.1 MGP_CBAJ_G0039034.1 mouse_genomes_project 8 3531041 3531185 - Gm24288 snoRNA snoRNA MGP_CBAJ_T0015746.1 MGP_CBAJ_G0013858.1 mouse_genomes_project 8 62941116 62942058 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0089539.1 MGP_CBAJ_G0033622.1 mouse_genomes_project 8 102690248 102751321 + MGP_CBAJ_P0089539 Nlrc5 protein_coding protein_coding MGP_CBAJ_T0089540.1 MGP_CBAJ_G0033622.1 mouse_genomes_project 8 102693607 102729802 + Nlrc5 protein_coding retained_intron MGP_CBAJ_T0089541.1 MGP_CBAJ_G0033622.1 mouse_genomes_project 8 102702298 102711856 + MGP_CBAJ_P0089541 Nlrc5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089542.1 MGP_CBAJ_G0033622.1 mouse_genomes_project 8 102746676 102748755 + Nlrc5 protein_coding retained_intron MGP_CBAJ_T0089543.1 MGP_CBAJ_G0033622.1 mouse_genomes_project 8 102750312 102752514 + Nlrc5 protein_coding retained_intron MGP_CBAJ_T0089544.1 MGP_CBAJ_G0033622.1 mouse_genomes_project 8 102750312 102752510 + MGP_CBAJ_P0089544 Nlrc5 protein_coding protein_coding MGP_CBAJ_T0005274.1 MGP_CBAJ_G0004464.1 mouse_genomes_project 8 49843135 49854500 - 4930579M01Rik antisense antisense MGP_CBAJ_T0010903.1 MGP_CBAJ_G0009041.1 mouse_genomes_project 8 136788712 136788794 + Mir1967 miRNA miRNA MGP_CBAJ_T0089819.1 MGP_CBAJ_G0033731.1 mouse_genomes_project 8 115894832 115901631 - MGP_CBAJ_P0089819 Dpep2 protein_coding protein_coding MGP_CBAJ_T0089820.1 MGP_CBAJ_G0033731.1 mouse_genomes_project 8 115894833 115906265 - MGP_CBAJ_P0089820 Dpep2 protein_coding protein_coding MGP_CBAJ_T0089821.1 MGP_CBAJ_G0033731.1 mouse_genomes_project 8 115894838 115901641 - MGP_CBAJ_P0089821 Dpep2 protein_coding protein_coding MGP_CBAJ_T0089822.1 MGP_CBAJ_G0033731.1 mouse_genomes_project 8 115897629 115901604 - Dpep2 protein_coding retained_intron MGP_CBAJ_T0089823.1 MGP_CBAJ_G0033731.1 mouse_genomes_project 8 115898381 115901632 - Dpep2 protein_coding retained_intron MGP_CBAJ_T0088172.1 MGP_CBAJ_G0033212.1 mouse_genomes_project 8 38455777 38457704 + MGP_CBAJ_P0088172 AI429214 protein_coding protein_coding MGP_CBAJ_T0089438.1 MGP_CBAJ_G0033588.1 mouse_genomes_project 8 98679696 98926540 + MGP_CBAJ_P0089438 Chd9 protein_coding protein_coding MGP_CBAJ_T0089439.1 MGP_CBAJ_G0033588.1 mouse_genomes_project 8 98679696 98926540 + MGP_CBAJ_P0089439 Chd9 protein_coding protein_coding MGP_CBAJ_T0090082.1 MGP_CBAJ_G0033819.1 mouse_genomes_project 8 125721640 126758293 + MGP_CBAJ_P0090082 Wwox protein_coding protein_coding MGP_CBAJ_T0090083.1 MGP_CBAJ_G0033819.1 mouse_genomes_project 8 125721680 126028900 + MGP_CBAJ_P0090083 Wwox protein_coding protein_coding MGP_CBAJ_T0090084.1 MGP_CBAJ_G0033819.1 mouse_genomes_project 8 125721680 126197750 + MGP_CBAJ_P0090084 Wwox protein_coding protein_coding MGP_CBAJ_T0090085.1 MGP_CBAJ_G0033819.1 mouse_genomes_project 8 125721687 125735794 + Wwox protein_coding processed_transcript MGP_CBAJ_T0090086.1 MGP_CBAJ_G0033819.1 mouse_genomes_project 8 125721687 125760960 + MGP_CBAJ_P0090086 Wwox protein_coding protein_coding MGP_CBAJ_T0090087.1 MGP_CBAJ_G0033819.1 mouse_genomes_project 8 125730195 125807725 + Wwox protein_coding processed_transcript MGP_CBAJ_T0090088.1 MGP_CBAJ_G0033819.1 mouse_genomes_project 8 125906452 126014011 + Wwox protein_coding processed_transcript MGP_CBAJ_T0090089.1 MGP_CBAJ_G0033819.1 mouse_genomes_project 8 126019805 126757728 + Wwox protein_coding processed_transcript MGP_CBAJ_T0090090.1 MGP_CBAJ_G0033819.1 mouse_genomes_project 8 126019805 126386280 + Wwox protein_coding processed_transcript MGP_CBAJ_T0088611.1 MGP_CBAJ_G0033341.1 mouse_genomes_project 8 75274450 75305970 - MGP_CBAJ_P0088611 Gm20422 protein_coding protein_coding MGP_CBAJ_T0088613.1 MGP_CBAJ_G0033341.1 mouse_genomes_project 8 75274772 75297954 - MGP_CBAJ_P0088613 Gm20422 protein_coding protein_coding MGP_CBAJ_T0087616.1 MGP_CBAJ_G0033005.1 mouse_genomes_project 8 1781953 1782780 - MGP_CBAJ_P0087616 protein_coding protein_coding MGP_CBAJ_T0087937.1 MGP_CBAJ_G0033129.1 mouse_genomes_project 8 22873437 22887312 - MGP_CBAJ_P0087937 Gins4 protein_coding protein_coding MGP_CBAJ_T0090230.1 MGP_CBAJ_G0033866.1 mouse_genomes_project 8 133438427 133455171 - MGP_CBAJ_P0090230 Mthfsd protein_coding protein_coding MGP_CBAJ_T0090231.1 MGP_CBAJ_G0033866.1 mouse_genomes_project 8 133441811 133448092 - Mthfsd protein_coding processed_transcript MGP_CBAJ_T0090232.1 MGP_CBAJ_G0033866.1 mouse_genomes_project 8 133444459 133455180 - MGP_CBAJ_P0090232 Mthfsd protein_coding protein_coding MGP_CBAJ_T0090233.1 MGP_CBAJ_G0033866.1 mouse_genomes_project 8 133444461 133455148 - Mthfsd protein_coding processed_transcript MGP_CBAJ_T0090234.1 MGP_CBAJ_G0033866.1 mouse_genomes_project 8 133444463 133455163 - MGP_CBAJ_P0090234 Mthfsd protein_coding protein_coding MGP_CBAJ_T0090235.1 MGP_CBAJ_G0033866.1 mouse_genomes_project 8 133444673 133448500 - Mthfsd protein_coding retained_intron MGP_CBAJ_T0090236.1 MGP_CBAJ_G0033866.1 mouse_genomes_project 8 133444757 133455245 - MGP_CBAJ_P0090236 Mthfsd protein_coding protein_coding MGP_CBAJ_T0090237.1 MGP_CBAJ_G0033866.1 mouse_genomes_project 8 133444843 133455232 - Mthfsd protein_coding retained_intron MGP_CBAJ_T0090238.1 MGP_CBAJ_G0033866.1 mouse_genomes_project 8 133445614 133455141 - Mthfsd protein_coding processed_transcript MGP_CBAJ_T0090239.1 MGP_CBAJ_G0033866.1 mouse_genomes_project 8 133445914 133452485 - Mthfsd protein_coding processed_transcript MGP_CBAJ_T0090240.1 MGP_CBAJ_G0033866.1 mouse_genomes_project 8 133448082 133455151 - MGP_CBAJ_P0090240 Mthfsd protein_coding protein_coding MGP_CBAJ_T0090241.1 MGP_CBAJ_G0033866.1 mouse_genomes_project 8 133449629 133454496 - Mthfsd protein_coding retained_intron MGP_CBAJ_T0090242.1 MGP_CBAJ_G0033866.1 mouse_genomes_project 8 133450758 133452542 - Mthfsd protein_coding processed_transcript MGP_CBAJ_T0090243.1 MGP_CBAJ_G0033866.1 mouse_genomes_project 8 133451005 133455166 - Mthfsd protein_coding processed_transcript MGP_CBAJ_T0090244.1 MGP_CBAJ_G0033866.1 mouse_genomes_project 8 133451381 133455196 - Mthfsd protein_coding processed_transcript MGP_CBAJ_T0005291.1 MGP_CBAJ_G0004478.1 mouse_genomes_project 8 87340520 87343152 - 4930505O20Rik antisense antisense MGP_CBAJ_T0089445.1 MGP_CBAJ_G0033591.1 mouse_genomes_project 8 98987313 99008659 - MGP_CBAJ_P0089445 Aktip protein_coding protein_coding MGP_CBAJ_T0089449.1 MGP_CBAJ_G0033591.1 mouse_genomes_project 8 99001009 99011764 - MGP_CBAJ_P0089449 Aktip protein_coding protein_coding MGP_CBAJ_T0089450.1 MGP_CBAJ_G0033591.1 mouse_genomes_project 8 99001009 99011241 - MGP_CBAJ_P0089450 Aktip protein_coding protein_coding MGP_CBAJ_T0089451.1 MGP_CBAJ_G0033591.1 mouse_genomes_project 8 99001979 99011322 - MGP_CBAJ_P0089451 Aktip protein_coding protein_coding MGP_CBAJ_T0089452.1 MGP_CBAJ_G0033591.1 mouse_genomes_project 8 99002141 99011326 - MGP_CBAJ_P0089452 Aktip protein_coding protein_coding MGP_CBAJ_T0089453.1 MGP_CBAJ_G0033591.1 mouse_genomes_project 8 99008592 99009402 - Aktip protein_coding processed_transcript MGP_CBAJ_T0087869.1 MGP_CBAJ_G0033106.1 mouse_genomes_project 8 21475897 21480178 + MGP_CBAJ_P0087869 Ccdc70 protein_coding protein_coding MGP_CBAJ_T0087870.1 MGP_CBAJ_G0033106.1 mouse_genomes_project 8 21476725 21480202 + MGP_CBAJ_P0087870 Ccdc70 protein_coding protein_coding MGP_CBAJ_T0088478.1 MGP_CBAJ_G0033301.1 mouse_genomes_project 8 66051436 66073946 + MGP_CBAJ_P0088478 Cbr4 protein_coding protein_coding MGP_CBAJ_T0088479.1 MGP_CBAJ_G0033301.1 mouse_genomes_project 8 66051437 66055283 + MGP_CBAJ_P0088479 Cbr4 protein_coding protein_coding MGP_CBAJ_T0088480.1 MGP_CBAJ_G0033301.1 mouse_genomes_project 8 66051457 66055601 + Cbr4 protein_coding retained_intron MGP_CBAJ_T0088481.1 MGP_CBAJ_G0033301.1 mouse_genomes_project 8 66051471 66073793 + Cbr4 protein_coding retained_intron MGP_CBAJ_T0088482.1 MGP_CBAJ_G0033301.1 mouse_genomes_project 8 66055105 66073793 + Cbr4 protein_coding retained_intron MGP_CBAJ_T0088483.1 MGP_CBAJ_G0033301.1 mouse_genomes_project 8 66061920 66073853 + Cbr4 protein_coding retained_intron MGP_CBAJ_T0089740.1 MGP_CBAJ_G0033696.1 mouse_genomes_project 8 115109373 115117511 + MGP_CBAJ_P0089740 E2f4 protein_coding protein_coding MGP_CBAJ_T0089943.1 MGP_CBAJ_G0033773.1 mouse_genomes_project 8 120366865 120409882 + Phlpp2 protein_coding retained_intron MGP_CBAJ_T0089944.1 MGP_CBAJ_G0033773.1 mouse_genomes_project 8 120366942 120449226 + MGP_CBAJ_P0089944 Phlpp2 protein_coding protein_coding MGP_CBAJ_T0089276.1 MGP_CBAJ_G0033542.1 mouse_genomes_project 8 92158953 92183855 - MGP_CBAJ_P0089276 Mast1 protein_coding protein_coding MGP_CBAJ_T0089277.1 MGP_CBAJ_G0033542.1 mouse_genomes_project 8 92159013 92170668 - Mast1 protein_coding retained_intron MGP_CBAJ_T0089278.1 MGP_CBAJ_G0033542.1 mouse_genomes_project 8 92159093 92192450 - MGP_CBAJ_P0089278 Mast1 protein_coding protein_coding MGP_CBAJ_T0089279.1 MGP_CBAJ_G0033542.1 mouse_genomes_project 8 92159093 92192448 - MGP_CBAJ_P0089279 Mast1 protein_coding unknown_likely_coding MGP_CBAJ_T0089281.1 MGP_CBAJ_G0033542.1 mouse_genomes_project 8 92168449 92172309 - Mast1 protein_coding retained_intron MGP_CBAJ_T0089282.1 MGP_CBAJ_G0033542.1 mouse_genomes_project 8 92170282 92175345 - Mast1 protein_coding retained_intron MGP_CBAJ_T0089283.1 MGP_CBAJ_G0033542.1 mouse_genomes_project 8 92181416 92183840 - Mast1 protein_coding retained_intron MGP_CBAJ_T0087941.1 MGP_CBAJ_G0033131.1 mouse_genomes_project 8 23093341 23133586 + MGP_CBAJ_P0087941 Sfrp1 protein_coding protein_coding MGP_CBAJ_T0089389.1 MGP_CBAJ_G0033574.1 mouse_genomes_project 8 94956698 94960410 - MGP_CBAJ_P0089389 Cbln1 protein_coding protein_coding MGP_CBAJ_T0089390.1 MGP_CBAJ_G0033574.1 mouse_genomes_project 8 94957082 94960204 - MGP_CBAJ_P0089390 Cbln1 protein_coding protein_coding MGP_CBAJ_T0005293.1 MGP_CBAJ_G0004480.1 mouse_genomes_project 8 92627338 92627762 + antisense antisense MGP_CBAJ_T0010822.1 MGP_CBAJ_G0008960.1 mouse_genomes_project 8 9620842 9620885 - Mir7238 miRNA miRNA MGP_CBAJ_T0090103.1 MGP_CBAJ_G0033826.1 mouse_genomes_project 8 128648552 128657898 - MGP_CBAJ_P0090103 1700030J22Rik protein_coding protein_coding MGP_CBAJ_T0090122.1 MGP_CBAJ_G0033836.1 mouse_genomes_project 8 130183318 131355520 + MGP_CBAJ_P0090122 Cdh13 protein_coding protein_coding MGP_CBAJ_T0090123.1 MGP_CBAJ_G0033836.1 mouse_genomes_project 8 130183340 130825836 + Cdh13 protein_coding retained_intron MGP_CBAJ_T0090124.1 MGP_CBAJ_G0033836.1 mouse_genomes_project 8 130183360 130955844 + Cdh13 protein_coding retained_intron MGP_CBAJ_T0090125.1 MGP_CBAJ_G0033836.1 mouse_genomes_project 8 130183381 130717234 + Cdh13 protein_coding retained_intron MGP_CBAJ_T0090126.1 MGP_CBAJ_G0033836.1 mouse_genomes_project 8 130183382 131217985 + Cdh13 protein_coding retained_intron MGP_CBAJ_T0090127.1 MGP_CBAJ_G0033836.1 mouse_genomes_project 8 130213985 130829137 + Cdh13 protein_coding processed_transcript MGP_CBAJ_T0090128.1 MGP_CBAJ_G0033836.1 mouse_genomes_project 8 131297788 131344900 + Cdh13 protein_coding processed_transcript MGP_CBAJ_T0009060.1 MGP_CBAJ_G0007270.1 mouse_genomes_project 8 100338091 100338530 - lincRNA lincRNA MGP_CBAJ_T0015722.1 MGP_CBAJ_G0013834.1 mouse_genomes_project 8 17368302 17368677 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0088200.1 MGP_CBAJ_G0033220.1 mouse_genomes_project 8 42499948 42542449 + MGP_CBAJ_P0088200 Vps37a protein_coding protein_coding MGP_CBAJ_T0009004.1 MGP_CBAJ_G0007232.1 mouse_genomes_project 8 65811623 65819119 - 1700001D01Rik lincRNA lincRNA MGP_CBAJ_T0088058.1 MGP_CBAJ_G0033162.1 mouse_genomes_project 8 26214694 26219423 + MGP_CBAJ_P0088058 Thap1 protein_coding protein_coding MGP_CBAJ_T0088059.1 MGP_CBAJ_G0033162.1 mouse_genomes_project 8 26214715 26219258 + MGP_CBAJ_P0088059 Thap1 protein_coding protein_coding MGP_CBAJ_T0088060.1 MGP_CBAJ_G0033162.1 mouse_genomes_project 8 26214737 26215895 + Thap1 protein_coding retained_intron MGP_CBAJ_T0089048.1 MGP_CBAJ_G0033473.1 mouse_genomes_project 8 85661217 85837640 + MGP_CBAJ_P0089048 Zfp827 protein_coding protein_coding MGP_CBAJ_T0089049.1 MGP_CBAJ_G0033473.1 mouse_genomes_project 8 85661217 85708669 + MGP_CBAJ_P0089049 Zfp827 protein_coding protein_coding MGP_CBAJ_T0089050.1 MGP_CBAJ_G0033473.1 mouse_genomes_project 8 85661367 85834753 + MGP_CBAJ_P0089050 Zfp827 protein_coding protein_coding MGP_CBAJ_T0089051.1 MGP_CBAJ_G0033473.1 mouse_genomes_project 8 85759684 85837663 + MGP_CBAJ_P0089051 Zfp827 protein_coding protein_coding MGP_CBAJ_T0089052.1 MGP_CBAJ_G0033473.1 mouse_genomes_project 8 85761840 85837089 + MGP_CBAJ_P0089052 Zfp827 protein_coding protein_coding MGP_CBAJ_T0089053.1 MGP_CBAJ_G0033473.1 mouse_genomes_project 8 85819214 85834751 + MGP_CBAJ_P0089053 Zfp827 protein_coding protein_coding MGP_CBAJ_T0089054.1 MGP_CBAJ_G0033473.1 mouse_genomes_project 8 85822379 85833658 + MGP_CBAJ_P0089054 Zfp827 protein_coding protein_coding MGP_CBAJ_T0088519.1 MGP_CBAJ_G0033311.1 mouse_genomes_project 8 69900897 69927892 + MGP_CBAJ_P0088519 Tmem192 protein_coding protein_coding MGP_CBAJ_T0088520.1 MGP_CBAJ_G0033311.1 mouse_genomes_project 8 69900897 69927892 + MGP_CBAJ_P0088520 Tmem192 protein_coding protein_coding MGP_CBAJ_T0088325.1 MGP_CBAJ_G0033254.1 mouse_genomes_project 8 49001832 49004454 - MGP_CBAJ_P0088325 Helt protein_coding protein_coding MGP_CBAJ_T0088809.1 MGP_CBAJ_G0033394.1 mouse_genomes_project 8 76423567 76437887 - MGP_CBAJ_P0088809 Mast3 protein_coding protein_coding MGP_CBAJ_T0089790.1 MGP_CBAJ_G0033715.1 mouse_genomes_project 8 115567832 115574751 - MGP_CBAJ_P0089790 Enkd1 protein_coding protein_coding MGP_CBAJ_T0010841.1 MGP_CBAJ_G0008979.1 mouse_genomes_project 8 50451994 50452074 + Gm27409 miRNA miRNA MGP_CBAJ_T0088403.1 MGP_CBAJ_G0033279.1 mouse_genomes_project 8 58277801 58318888 + MGP_CBAJ_P0088403 Asb5 protein_coding protein_coding MGP_CBAJ_T0089459.1 MGP_CBAJ_G0033593.1 mouse_genomes_project 8 99199994 99572241 + MGP_CBAJ_P0089459 Fto protein_coding protein_coding MGP_CBAJ_T0089460.1 MGP_CBAJ_G0033593.1 mouse_genomes_project 8 99199997 99321462 + Fto protein_coding retained_intron MGP_CBAJ_T0089461.1 MGP_CBAJ_G0033593.1 mouse_genomes_project 8 99200020 99412760 + Fto protein_coding retained_intron MGP_CBAJ_T0089462.1 MGP_CBAJ_G0033593.1 mouse_genomes_project 8 99200030 99366502 + Fto protein_coding retained_intron MGP_CBAJ_T0089463.1 MGP_CBAJ_G0033593.1 mouse_genomes_project 8 99275777 99297851 + MGP_CBAJ_P0089463 Fto protein_coding protein_coding MGP_CBAJ_T0089464.1 MGP_CBAJ_G0033593.1 mouse_genomes_project 8 99278592 99297475 + MGP_CBAJ_P0089464 Fto protein_coding protein_coding MGP_CBAJ_T0089465.1 MGP_CBAJ_G0033593.1 mouse_genomes_project 8 99346347 99570742 + Fto protein_coding processed_transcript MGP_CBAJ_T0015778.1 MGP_CBAJ_G0013890.1 mouse_genomes_project 8 106031400 106032800 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0090314.1 MGP_CBAJ_G0033885.1 mouse_genomes_project 8 134994704 135007524 - MGP_CBAJ_P0090314 Rnf166 protein_coding protein_coding MGP_CBAJ_T0090315.1 MGP_CBAJ_G0033885.1 mouse_genomes_project 8 134995419 134996785 - Rnf166 protein_coding retained_intron MGP_CBAJ_T0090316.1 MGP_CBAJ_G0033885.1 mouse_genomes_project 8 134996566 135007148 - Rnf166 protein_coding processed_transcript MGP_CBAJ_T0005246.1 MGP_CBAJ_G0004444.1 mouse_genomes_project 8 10947009 10952537 - Gm15350 antisense antisense MGP_CBAJ_T0005247.1 MGP_CBAJ_G0004444.1 mouse_genomes_project 8 10947009 10950594 - Gm15350 antisense antisense MGP_CBAJ_T0099569.1 MGP_CBAJ_G0037824.1 mouse_genomes_project 8 111891953 111892016 + Gm24602 snRNA snRNA MGP_CBAJ_T0097850.1 MGP_CBAJ_G0036123.1 mouse_genomes_project 8 129653938 129655111 + pseudogene pseudogene MGP_CBAJ_T0088820.1 MGP_CBAJ_G0033403.1 mouse_genomes_project 8 76598228 76599834 + MGP_CBAJ_P0088820 protein_coding protein_coding MGP_CBAJ_T0009015.1 MGP_CBAJ_G0007241.1 mouse_genomes_project 8 84088713 84096197 + 1700092C02Rik lincRNA lincRNA MGP_CBAJ_T0005312.1 MGP_CBAJ_G0004496.1 mouse_genomes_project 8 125942096 125944667 - Gm16117 antisense antisense MGP_CBAJ_T0088449.1 MGP_CBAJ_G0033294.1 mouse_genomes_project 8 64906688 64980726 - MGP_CBAJ_P0088449 Gm10283 protein_coding protein_coding MGP_CBAJ_T0088955.1 MGP_CBAJ_G0033436.1 mouse_genomes_project 8 78015413 78019926 + MGP_CBAJ_P0088955 Olfr374 protein_coding protein_coding MGP_CBAJ_T0089372.1 MGP_CBAJ_G0033569.1 mouse_genomes_project 8 93886622 93989660 - MGP_CBAJ_P0089372 Abcc12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089373.1 MGP_CBAJ_G0033569.1 mouse_genomes_project 8 93908937 93989691 - MGP_CBAJ_P0089373 Abcc12 protein_coding protein_coding MGP_CBAJ_T0089374.1 MGP_CBAJ_G0033569.1 mouse_genomes_project 8 93908941 93941309 - MGP_CBAJ_P0089374 Abcc12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089375.1 MGP_CBAJ_G0033569.1 mouse_genomes_project 8 93909199 93981852 - MGP_CBAJ_P0089375 Abcc12 protein_coding protein_coding MGP_CBAJ_T0089376.1 MGP_CBAJ_G0033569.1 mouse_genomes_project 8 93909199 93981852 - MGP_CBAJ_P0089376 Abcc12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089377.1 MGP_CBAJ_G0033569.1 mouse_genomes_project 8 93909199 93981852 - MGP_CBAJ_P0089377 Abcc12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089378.1 MGP_CBAJ_G0033569.1 mouse_genomes_project 8 93940522 93989691 - MGP_CBAJ_P0089378 Abcc12 protein_coding protein_coding MGP_CBAJ_T0089657.1 MGP_CBAJ_G0033661.1 mouse_genomes_project 8 113817410 113866009 + MGP_CBAJ_P0089657 Bean1 protein_coding protein_coding MGP_CBAJ_T0089658.1 MGP_CBAJ_G0033661.1 mouse_genomes_project 8 113817410 113866009 + MGP_CBAJ_P0089658 Bean1 protein_coding protein_coding MGP_CBAJ_T0089659.1 MGP_CBAJ_G0033661.1 mouse_genomes_project 8 113817410 113866009 + MGP_CBAJ_P0089659 Bean1 protein_coding protein_coding MGP_CBAJ_T0089660.1 MGP_CBAJ_G0033661.1 mouse_genomes_project 8 113817410 113866009 + MGP_CBAJ_P0089660 Bean1 protein_coding protein_coding MGP_CBAJ_T0088082.1 MGP_CBAJ_G0033176.1 mouse_genomes_project 8 28919415 28943496 - MGP_CBAJ_P0088082 Ppp2r3c protein_coding protein_coding MGP_CBAJ_T0089483.1 MGP_CBAJ_G0033604.1 mouse_genomes_project 8 101233009 101271981 - MGP_CBAJ_P0089483 Ces1d protein_coding protein_coding MGP_CBAJ_T0089484.1 MGP_CBAJ_G0033604.1 mouse_genomes_project 8 101233244 101239768 - Ces1d protein_coding processed_transcript MGP_CBAJ_T0089485.1 MGP_CBAJ_G0033604.1 mouse_genomes_project 8 101233270 101247334 - Ces1d protein_coding processed_transcript MGP_CBAJ_T0089486.1 MGP_CBAJ_G0033604.1 mouse_genomes_project 8 101268947 101271920 - Ces1d protein_coding processed_transcript MGP_CBAJ_T0088296.1 MGP_CBAJ_G0033248.1 mouse_genomes_project 8 48648432 48676672 + MGP_CBAJ_P0088296 Ufsp2 protein_coding protein_coding MGP_CBAJ_T0088297.1 MGP_CBAJ_G0033248.1 mouse_genomes_project 8 48648438 48676571 + Ufsp2 protein_coding retained_intron MGP_CBAJ_T0088298.1 MGP_CBAJ_G0033248.1 mouse_genomes_project 8 48648448 48655593 + Ufsp2 protein_coding retained_intron MGP_CBAJ_T0088299.1 MGP_CBAJ_G0033248.1 mouse_genomes_project 8 48648454 48660099 + Ufsp2 protein_coding processed_transcript MGP_CBAJ_T0088300.1 MGP_CBAJ_G0033248.1 mouse_genomes_project 8 48648482 48655113 + Ufsp2 protein_coding processed_transcript MGP_CBAJ_T0088301.1 MGP_CBAJ_G0033248.1 mouse_genomes_project 8 48674841 48676574 + Ufsp2 protein_coding retained_intron MGP_CBAJ_T0090011.1 MGP_CBAJ_G0033795.1 mouse_genomes_project 8 121899458 122022368 - MGP_CBAJ_P0090011 Glg1 protein_coding protein_coding MGP_CBAJ_T0090012.1 MGP_CBAJ_G0033795.1 mouse_genomes_project 8 121902562 121925075 - MGP_CBAJ_P0090012 Glg1 protein_coding protein_coding MGP_CBAJ_T0090013.1 MGP_CBAJ_G0033795.1 mouse_genomes_project 8 121902602 122022352 - MGP_CBAJ_P0090013 Glg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090014.1 MGP_CBAJ_G0033795.1 mouse_genomes_project 8 121902935 122022368 - MGP_CBAJ_P0090014 Glg1 protein_coding protein_coding MGP_CBAJ_T0088418.1 MGP_CBAJ_G0033284.1 mouse_genomes_project 8 59774041 59901720 + Glra3 protein_coding processed_transcript MGP_CBAJ_T0088419.1 MGP_CBAJ_G0033284.1 mouse_genomes_project 8 59774090 59992119 + MGP_CBAJ_P0088419 Glra3 protein_coding protein_coding MGP_CBAJ_T0100841.1 MGP_CBAJ_G0039096.1 mouse_genomes_project 8 135723593 135723679 + Snord68 snoRNA snoRNA MGP_CBAJ_T0010883.1 MGP_CBAJ_G0009021.1 mouse_genomes_project 8 117192546 117192628 - Mir7075 miRNA miRNA MGP_CBAJ_T0099563.1 MGP_CBAJ_G0037818.1 mouse_genomes_project 8 92593846 92593953 + Gm22336 snRNA snRNA MGP_CBAJ_T0015719.1 MGP_CBAJ_G0013831.1 mouse_genomes_project 8 11218150 11219072 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0088307.1 MGP_CBAJ_G0033250.1 mouse_genomes_project 8 48679016 48722650 + MGP_CBAJ_P0088307 Lrp2bp protein_coding protein_coding MGP_CBAJ_T0088308.1 MGP_CBAJ_G0033250.1 mouse_genomes_project 8 48679021 48722381 + MGP_CBAJ_P0088308 Lrp2bp protein_coding protein_coding MGP_CBAJ_T0088309.1 MGP_CBAJ_G0033250.1 mouse_genomes_project 8 48696355 48724472 + MGP_CBAJ_P0088309 Lrp2bp protein_coding protein_coding MGP_CBAJ_T0088310.1 MGP_CBAJ_G0033250.1 mouse_genomes_project 8 48696364 48722638 + MGP_CBAJ_P0088310 Lrp2bp protein_coding nonsense_mediated_decay MGP_CBAJ_T0088311.1 MGP_CBAJ_G0033250.1 mouse_genomes_project 8 48697503 48708185 + Lrp2bp protein_coding processed_transcript MGP_CBAJ_T0088312.1 MGP_CBAJ_G0033250.1 mouse_genomes_project 8 48714741 48724443 + Lrp2bp protein_coding processed_transcript MGP_CBAJ_T0098100.1 MGP_CBAJ_G0036373.1 mouse_genomes_project 8 13827154 13827247 + Gm24222 rRNA rRNA MGP_CBAJ_T0090317.1 MGP_CBAJ_G0033886.1 mouse_genomes_project 8 135007602 135018244 + MGP_CBAJ_P0090317 Ctu2 protein_coding protein_coding MGP_CBAJ_T0090318.1 MGP_CBAJ_G0033886.1 mouse_genomes_project 8 135007668 135019290 + MGP_CBAJ_P0090318 Ctu2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090319.1 MGP_CBAJ_G0033886.1 mouse_genomes_project 8 135007672 135016893 + Ctu2 protein_coding retained_intron MGP_CBAJ_T0090320.1 MGP_CBAJ_G0033886.1 mouse_genomes_project 8 135007672 135009677 + MGP_CBAJ_P0090320 Ctu2 protein_coding protein_coding MGP_CBAJ_T0090321.1 MGP_CBAJ_G0033886.1 mouse_genomes_project 8 135007679 135010807 + MGP_CBAJ_P0090321 Ctu2 protein_coding protein_coding MGP_CBAJ_T0090322.1 MGP_CBAJ_G0033886.1 mouse_genomes_project 8 135007702 135010412 + Ctu2 protein_coding retained_intron MGP_CBAJ_T0090323.1 MGP_CBAJ_G0033886.1 mouse_genomes_project 8 135008156 135009709 + Ctu2 protein_coding retained_intron MGP_CBAJ_T0090324.1 MGP_CBAJ_G0033886.1 mouse_genomes_project 8 135016073 135016892 + Ctu2 protein_coding retained_intron MGP_CBAJ_T0090325.1 MGP_CBAJ_G0033886.1 mouse_genomes_project 8 135016108 135016896 + MGP_CBAJ_P0090325 Ctu2 protein_coding protein_coding MGP_CBAJ_T0088548.1 MGP_CBAJ_G0033323.1 mouse_genomes_project 8 72764026 72771734 + MGP_CBAJ_P0088548 Nat2 protein_coding protein_coding MGP_CBAJ_T0088549.1 MGP_CBAJ_G0033323.1 mouse_genomes_project 8 72764107 72771738 + MGP_CBAJ_P0088549 Nat2 protein_coding protein_coding MGP_CBAJ_T0090072.1 MGP_CBAJ_G0033816.1 mouse_genomes_project 8 125362878 125383537 + MGP_CBAJ_P0090072 Nudt7 protein_coding protein_coding MGP_CBAJ_T0090073.1 MGP_CBAJ_G0033816.1 mouse_genomes_project 8 125362895 125381103 + MGP_CBAJ_P0090073 Nudt7 protein_coding protein_coding MGP_CBAJ_T0090074.1 MGP_CBAJ_G0033816.1 mouse_genomes_project 8 125362939 125381113 + MGP_CBAJ_P0090074 Nudt7 protein_coding protein_coding MGP_CBAJ_T0090075.1 MGP_CBAJ_G0033816.1 mouse_genomes_project 8 125362962 125381107 + MGP_CBAJ_P0090075 Nudt7 protein_coding protein_coding MGP_CBAJ_T0090076.1 MGP_CBAJ_G0033816.1 mouse_genomes_project 8 125362963 125377209 + MGP_CBAJ_P0090076 Nudt7 protein_coding protein_coding MGP_CBAJ_T0089623.1 MGP_CBAJ_G0033651.1 mouse_genomes_project 8 103973327 103984784 + MGP_CBAJ_P0089623 Gins3 protein_coding protein_coding MGP_CBAJ_T0089656.1 MGP_CBAJ_G0033660.1 mouse_genomes_project 8 113731065 113781025 + MGP_CBAJ_P0089656 Cdh5 protein_coding protein_coding MGP_CBAJ_T0090055.1 MGP_CBAJ_G0033809.1 mouse_genomes_project 8 122909570 122940832 - MGP_CBAJ_P0090055 Adat1 protein_coding protein_coding MGP_CBAJ_T0090056.1 MGP_CBAJ_G0033809.1 mouse_genomes_project 8 122912031 122940892 - MGP_CBAJ_P0090056 Adat1 protein_coding protein_coding MGP_CBAJ_T0090350.1 MGP_CBAJ_G0033896.1 mouse_genomes_project 8 135484844 135580958 - MGP_CBAJ_P0090350 protein_coding protein_coding MGP_CBAJ_T0090351.1 MGP_CBAJ_G0033896.1 mouse_genomes_project 8 135485329 135580958 - MGP_CBAJ_P0090351 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090352.1 MGP_CBAJ_G0033896.1 mouse_genomes_project 8 135485658 135521512 - MGP_CBAJ_P0090352 protein_coding protein_coding MGP_CBAJ_T0090353.1 MGP_CBAJ_G0033896.1 mouse_genomes_project 8 135501576 135521782 - MGP_CBAJ_P0090353 protein_coding unknown_likely_coding MGP_CBAJ_T0090354.1 MGP_CBAJ_G0033896.1 mouse_genomes_project 8 135511516 135580938 - protein_coding retained_intron MGP_CBAJ_T0088879.1 MGP_CBAJ_G0033416.1 mouse_genomes_project 8 77269614 77274944 + MGP_CBAJ_P0088879 Gtpbp3 protein_coding protein_coding MGP_CBAJ_T0088880.1 MGP_CBAJ_G0033416.1 mouse_genomes_project 8 77269614 77274944 + MGP_CBAJ_P0088880 Gtpbp3 protein_coding protein_coding MGP_CBAJ_T0088881.1 MGP_CBAJ_G0033416.1 mouse_genomes_project 8 77270232 77274944 + MGP_CBAJ_P0088881 Gtpbp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088882.1 MGP_CBAJ_G0033416.1 mouse_genomes_project 8 77270239 77281467 + MGP_CBAJ_P0088882 Gtpbp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088883.1 MGP_CBAJ_G0033416.1 mouse_genomes_project 8 77270245 77271092 + Gtpbp3 protein_coding retained_intron MGP_CBAJ_T0088884.1 MGP_CBAJ_G0033416.1 mouse_genomes_project 8 77270254 77274944 + Gtpbp3 protein_coding retained_intron MGP_CBAJ_T0088885.1 MGP_CBAJ_G0033416.1 mouse_genomes_project 8 77270262 77274944 + MGP_CBAJ_P0088885 Gtpbp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0088886.1 MGP_CBAJ_G0033416.1 mouse_genomes_project 8 77270972 77272949 + Gtpbp3 protein_coding retained_intron MGP_CBAJ_T0015745.1 MGP_CBAJ_G0013857.1 mouse_genomes_project 8 55744541 55745507 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015763.1 MGP_CBAJ_G0013875.1 mouse_genomes_project 8 88123139 88123727 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0087666.1 MGP_CBAJ_G0033030.1 mouse_genomes_project 8 10635318 10653048 - MGP_CBAJ_P0087666 protein_coding protein_coding MGP_CBAJ_T0010869.1 MGP_CBAJ_G0009007.1 mouse_genomes_project 8 93997490 93997612 + Gm44348 miRNA miRNA MGP_CBAJ_T0089144.1 MGP_CBAJ_G0033507.1 mouse_genomes_project 8 91231415 91235172 + MGP_CBAJ_P0089144 Samd1 protein_coding protein_coding MGP_CBAJ_T0088031.1 MGP_CBAJ_G0033153.1 mouse_genomes_project 8 25791602 25809981 + MGP_CBAJ_P0088031 Lsm1 protein_coding protein_coding MGP_CBAJ_T0100794.1 MGP_CBAJ_G0039049.1 mouse_genomes_project 8 31852888 31852992 - Snord13 snoRNA snoRNA MGP_CBAJ_T0088040.1 MGP_CBAJ_G0033156.1 mouse_genomes_project 8 25867817 25963849 + MGP_CBAJ_P0088040 Kcnu1 protein_coding protein_coding MGP_CBAJ_T0088041.1 MGP_CBAJ_G0033156.1 mouse_genomes_project 8 25929824 25963850 + MGP_CBAJ_P0088041 Kcnu1 protein_coding protein_coding MGP_CBAJ_T0088042.1 MGP_CBAJ_G0033156.1 mouse_genomes_project 8 25929836 25942970 + MGP_CBAJ_P0088042 Kcnu1 protein_coding protein_coding MGP_CBAJ_T0088469.1 MGP_CBAJ_G0033299.1 mouse_genomes_project 8 65490755 65644542 + MGP_CBAJ_P0088469 Nek1 protein_coding protein_coding MGP_CBAJ_T0088470.1 MGP_CBAJ_G0033299.1 mouse_genomes_project 8 65490755 65644549 + MGP_CBAJ_P0088470 Nek1 protein_coding protein_coding MGP_CBAJ_T0088471.1 MGP_CBAJ_G0033299.1 mouse_genomes_project 8 65490760 65545452 + Nek1 protein_coding retained_intron MGP_CBAJ_T0088472.1 MGP_CBAJ_G0033299.1 mouse_genomes_project 8 65490799 65620679 + Nek1 protein_coding retained_intron MGP_CBAJ_T0088473.1 MGP_CBAJ_G0033299.1 mouse_genomes_project 8 65490801 65531533 + Nek1 protein_coding retained_intron MGP_CBAJ_T0088474.1 MGP_CBAJ_G0033299.1 mouse_genomes_project 8 65490801 65530998 + Nek1 protein_coding retained_intron MGP_CBAJ_T0088475.1 MGP_CBAJ_G0033299.1 mouse_genomes_project 8 65491114 65594916 + MGP_CBAJ_P0088475 Nek1 protein_coding unknown_likely_coding MGP_CBAJ_T0088476.1 MGP_CBAJ_G0033299.1 mouse_genomes_project 8 65550743 65597685 + MGP_CBAJ_P0088476 Nek1 protein_coding protein_coding MGP_CBAJ_T0018197.1 MGP_CBAJ_G0015453.1 mouse_genomes_project 8 43288992 43291696 + Gm16348 processed_transcript processed_transcript MGP_CBAJ_T0018198.1 MGP_CBAJ_G0015453.1 mouse_genomes_project 8 43288993 43291328 + Gm16348 processed_transcript processed_transcript MGP_CBAJ_T0090453.1 MGP_CBAJ_G0033923.1 mouse_genomes_project 8 136699671 136737043 - MGP_CBAJ_P0090453 Abcb10 protein_coding protein_coding MGP_CBAJ_T0087841.1 MGP_CBAJ_G0033080.1 mouse_genomes_project 8 17927239 17929492 + MGP_CBAJ_P0087841 Spag11b protein_coding protein_coding MGP_CBAJ_T0087842.1 MGP_CBAJ_G0033080.1 mouse_genomes_project 8 17927278 17929231 + MGP_CBAJ_P0087842 Spag11b protein_coding protein_coding MGP_CBAJ_T0015725.1 MGP_CBAJ_G0013837.1 mouse_genomes_project 8 18534150 18536624 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010904.1 MGP_CBAJ_G0009042.1 mouse_genomes_project 8 137977840 137977898 + Gm22197 miRNA miRNA MGP_CBAJ_T0005295.1 MGP_CBAJ_G0004482.1 mouse_genomes_project 8 102580961 102588701 - Gm15890 antisense antisense MGP_CBAJ_T0098109.1 MGP_CBAJ_G0036382.1 mouse_genomes_project 8 126426275 126426375 - Gm22556 rRNA rRNA MGP_CBAJ_T0089072.1 MGP_CBAJ_G0033483.1 mouse_genomes_project 8 87555410 87596533 - MGP_CBAJ_P0089072 Smarca5 protein_coding protein_coding MGP_CBAJ_T0089073.1 MGP_CBAJ_G0033483.1 mouse_genomes_project 8 87562423 87596461 - Smarca5 protein_coding processed_transcript MGP_CBAJ_T0089074.1 MGP_CBAJ_G0033483.1 mouse_genomes_project 8 87566357 87568630 - Smarca5 protein_coding retained_intron MGP_CBAJ_T0089075.1 MGP_CBAJ_G0033483.1 mouse_genomes_project 8 87566669 87567793 - Smarca5 protein_coding retained_intron MGP_CBAJ_T0089076.1 MGP_CBAJ_G0033483.1 mouse_genomes_project 8 87573132 87574753 - Smarca5 protein_coding retained_intron MGP_CBAJ_T0089077.1 MGP_CBAJ_G0033483.1 mouse_genomes_project 8 87582648 87583459 - Smarca5 protein_coding retained_intron MGP_CBAJ_T0087729.1 MGP_CBAJ_G0033041.1 mouse_genomes_project 8 11323534 11348509 - MGP_CBAJ_P0087729 Grtp1 protein_coding protein_coding MGP_CBAJ_T0089613.1 MGP_CBAJ_G0033644.1 mouse_genomes_project 8 103624490 103630307 - MGP_CBAJ_P0089613 Zfp319 protein_coding protein_coding MGP_CBAJ_T0087617.1 MGP_CBAJ_G0033006.1 mouse_genomes_project 8 1854701 1899781 - MGP_CBAJ_P0087617 Shcbp1 protein_coding protein_coding MGP_CBAJ_T0090489.1 MGP_CBAJ_G0033935.1 mouse_genomes_project 8 137665818 137711871 + MGP_CBAJ_P0090489 Trim67 protein_coding protein_coding MGP_CBAJ_T0090490.1 MGP_CBAJ_G0033935.1 mouse_genomes_project 8 137665891 137711882 + MGP_CBAJ_P0090490 Trim67 protein_coding protein_coding MGP_CBAJ_T0089068.1 MGP_CBAJ_G0033480.1 mouse_genomes_project 8 86713610 86738276 - Hhip protein_coding processed_transcript MGP_CBAJ_T0089069.1 MGP_CBAJ_G0033480.1 mouse_genomes_project 8 86718289 86817347 - MGP_CBAJ_P0089069 Hhip protein_coding protein_coding MGP_CBAJ_T0088347.1 MGP_CBAJ_G0033258.1 mouse_genomes_project 8 49345666 49369353 + MGP_CBAJ_P0088347 Casp3 protein_coding unknown_likely_coding MGP_CBAJ_T0100814.1 MGP_CBAJ_G0039069.1 mouse_genomes_project 8 73337810 73337941 + Gm22018 snoRNA snoRNA MGP_CBAJ_T0099566.1 MGP_CBAJ_G0037821.1 mouse_genomes_project 8 99969502 99969606 + Gm24254 snRNA snRNA MGP_CBAJ_T0010876.1 MGP_CBAJ_G0009014.1 mouse_genomes_project 8 105150095 105150171 + Gm24132 miRNA miRNA MGP_CBAJ_T0010893.1 MGP_CBAJ_G0009031.1 mouse_genomes_project 8 129212583 129212640 + Mir7077 miRNA miRNA MGP_CBAJ_T0089391.1 MGP_CBAJ_G0033575.1 mouse_genomes_project 8 95064534 95093655 + MGP_CBAJ_P0089391 4933402J07Rik protein_coding protein_coding MGP_CBAJ_T0089094.1 MGP_CBAJ_G0033489.1 mouse_genomes_project 8 89974086 90214285 + MGP_CBAJ_P0089094 Rnf150 protein_coding protein_coding MGP_CBAJ_T0015734.1 MGP_CBAJ_G0013846.1 mouse_genomes_project 8 31925774 31926240 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0088649.1 MGP_CBAJ_G0033353.1 mouse_genomes_project 8 75588145 75619432 + MGP_CBAJ_P0088649 Sugp1 protein_coding protein_coding MGP_CBAJ_T0089106.1 MGP_CBAJ_G0033494.1 mouse_genomes_project 8 90512667 90557397 + MGP_CBAJ_P0089106 Mgat4d protein_coding protein_coding MGP_CBAJ_T0089107.1 MGP_CBAJ_G0033494.1 mouse_genomes_project 8 90528556 90560445 + Mgat4d protein_coding processed_transcript MGP_CBAJ_T0088044.1 MGP_CBAJ_G0033158.1 mouse_genomes_project 8 26015023 26036894 - MGP_CBAJ_P0088044 Pomk protein_coding protein_coding MGP_CBAJ_T0089066.1 MGP_CBAJ_G0033478.1 mouse_genomes_project 8 86390523 86418651 - MGP_CBAJ_P0089066 Abce1 protein_coding protein_coding MGP_CBAJ_T0089938.1 MGP_CBAJ_G0033772.1 mouse_genomes_project 8 120268118 120362570 + MGP_CBAJ_P0089938 protein_coding protein_coding MGP_CBAJ_T0089939.1 MGP_CBAJ_G0033772.1 mouse_genomes_project 8 120268470 120359724 + MGP_CBAJ_P0089939 protein_coding protein_coding MGP_CBAJ_T0089940.1 MGP_CBAJ_G0033772.1 mouse_genomes_project 8 120339420 120348040 + protein_coding retained_intron MGP_CBAJ_T0089941.1 MGP_CBAJ_G0033772.1 mouse_genomes_project 8 120356813 120358656 + protein_coding retained_intron MGP_CBAJ_T0089942.1 MGP_CBAJ_G0033772.1 mouse_genomes_project 8 120361473 120362569 + MGP_CBAJ_P0089942 protein_coding protein_coding MGP_CBAJ_T0089753.1 MGP_CBAJ_G0033702.1 mouse_genomes_project 8 115204652 115216099 + MGP_CBAJ_P0089753 Plekhg4 protein_coding unknown_likely_coding MGP_CBAJ_T0089754.1 MGP_CBAJ_G0033702.1 mouse_genomes_project 8 115207131 115209418 + MGP_CBAJ_P0089754 Plekhg4 protein_coding protein_coding MGP_CBAJ_T0089755.1 MGP_CBAJ_G0033702.1 mouse_genomes_project 8 115208761 115216717 + MGP_CBAJ_P0089755 Plekhg4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089756.1 MGP_CBAJ_G0033702.1 mouse_genomes_project 8 115209238 115216099 + MGP_CBAJ_P0089756 Plekhg4 protein_coding protein_coding MGP_CBAJ_T0089757.1 MGP_CBAJ_G0033702.1 mouse_genomes_project 8 115209238 115216720 + MGP_CBAJ_P0089757 Plekhg4 protein_coding protein_coding MGP_CBAJ_T0089758.1 MGP_CBAJ_G0033702.1 mouse_genomes_project 8 115214351 115216713 + Plekhg4 protein_coding retained_intron MGP_CBAJ_T0088447.1 MGP_CBAJ_G0033293.1 mouse_genomes_project 8 63203647 63206189 + MGP_CBAJ_P0088447 BC030500 protein_coding protein_coding MGP_CBAJ_T0088448.1 MGP_CBAJ_G0033293.1 mouse_genomes_project 8 63204149 63205089 + MGP_CBAJ_P0088448 BC030500 protein_coding protein_coding MGP_CBAJ_T0088521.1 MGP_CBAJ_G0033312.1 mouse_genomes_project 8 69936850 69942845 - MGP_CBAJ_P0088521 Trim75 protein_coding protein_coding MGP_CBAJ_T0089595.1 MGP_CBAJ_G0033640.1 mouse_genomes_project 8 103363382 103388214 + MGP_CBAJ_P0089595 Katnb1 protein_coding protein_coding MGP_CBAJ_T0090160.1 MGP_CBAJ_G0033851.1 mouse_genomes_project 8 131920445 131954327 - MGP_CBAJ_P0090160 Cotl1 protein_coding protein_coding MGP_CBAJ_T0090161.1 MGP_CBAJ_G0033851.1 mouse_genomes_project 8 131920445 131954384 - MGP_CBAJ_P0090161 Cotl1 protein_coding protein_coding MGP_CBAJ_T0090300.1 MGP_CBAJ_G0033880.1 mouse_genomes_project 8 134903002 134944333 + MGP_CBAJ_P0090300 Zc3h18 protein_coding protein_coding MGP_CBAJ_T0090301.1 MGP_CBAJ_G0033880.1 mouse_genomes_project 8 134903036 134944334 + MGP_CBAJ_P0090301 Zc3h18 protein_coding protein_coding MGP_CBAJ_T0090302.1 MGP_CBAJ_G0033880.1 mouse_genomes_project 8 134903037 134910118 + MGP_CBAJ_P0090302 Zc3h18 protein_coding protein_coding MGP_CBAJ_T0090303.1 MGP_CBAJ_G0033880.1 mouse_genomes_project 8 134903041 134916135 + Zc3h18 protein_coding retained_intron MGP_CBAJ_T0090304.1 MGP_CBAJ_G0033880.1 mouse_genomes_project 8 134903074 134944333 + MGP_CBAJ_P0090304 Zc3h18 protein_coding protein_coding MGP_CBAJ_T0090305.1 MGP_CBAJ_G0033880.1 mouse_genomes_project 8 134929667 134932525 + Zc3h18 protein_coding processed_transcript MGP_CBAJ_T0090306.1 MGP_CBAJ_G0033880.1 mouse_genomes_project 8 134929737 134937801 + MGP_CBAJ_P0090306 Zc3h18 protein_coding protein_coding MGP_CBAJ_T0090307.1 MGP_CBAJ_G0033880.1 mouse_genomes_project 8 134934240 134944333 + Zc3h18 protein_coding retained_intron MGP_CBAJ_T0090308.1 MGP_CBAJ_G0033880.1 mouse_genomes_project 8 134934415 134937302 + Zc3h18 protein_coding retained_intron MGP_CBAJ_T0090309.1 MGP_CBAJ_G0033880.1 mouse_genomes_project 8 134937722 134942646 + MGP_CBAJ_P0090309 Zc3h18 protein_coding protein_coding MGP_CBAJ_T0018231.1 MGP_CBAJ_G0015465.1 mouse_genomes_project 8 108326287 108436706 - Gm15680 processed_transcript processed_transcript MGP_CBAJ_T0100836.1 MGP_CBAJ_G0039091.1 mouse_genomes_project 8 122225484 122225616 + Gm24793 snoRNA snoRNA MGP_CBAJ_T0100792.1 MGP_CBAJ_G0039047.1 mouse_genomes_project 8 25591600 25591731 - Gm23184 snoRNA snoRNA MGP_CBAJ_T0087891.1 MGP_CBAJ_G0033115.1 mouse_genomes_project 8 21923274 21949282 - MGP_CBAJ_P0087891 Slc25a15 protein_coding protein_coding MGP_CBAJ_T0010867.1 MGP_CBAJ_G0009005.1 mouse_genomes_project 8 92380128 92380184 - Gm23388 miRNA miRNA MGP_CBAJ_T0015739.1 MGP_CBAJ_G0013851.1 mouse_genomes_project 8 37749457 37750502 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0088061.1 MGP_CBAJ_G0033163.1 mouse_genomes_project 8 27165226 27170848 + MGP_CBAJ_P0088061 Zfp703 protein_coding protein_coding MGP_CBAJ_T0088062.1 MGP_CBAJ_G0033163.1 mouse_genomes_project 8 27165226 27170848 + MGP_CBAJ_P0088062 Zfp703 protein_coding protein_coding MGP_CBAJ_T0088493.1 MGP_CBAJ_G0033303.1 mouse_genomes_project 8 66563060 66600724 + MGP_CBAJ_P0088493 Ddx60 protein_coding protein_coding MGP_CBAJ_T0088494.1 MGP_CBAJ_G0033303.1 mouse_genomes_project 8 66563062 66694356 + MGP_CBAJ_P0088494 Ddx60 protein_coding protein_coding MGP_CBAJ_T0088495.1 MGP_CBAJ_G0033303.1 mouse_genomes_project 8 66563062 66694362 + MGP_CBAJ_P0088495 Ddx60 protein_coding protein_coding MGP_CBAJ_T0088496.1 MGP_CBAJ_G0033303.1 mouse_genomes_project 8 66563062 66575931 + MGP_CBAJ_P0088496 Ddx60 protein_coding protein_coding MGP_CBAJ_T0088497.1 MGP_CBAJ_G0033303.1 mouse_genomes_project 8 66628752 66633248 + Ddx60 protein_coding retained_intron MGP_CBAJ_T0088498.1 MGP_CBAJ_G0033303.1 mouse_genomes_project 8 66679399 66681771 + Ddx60 protein_coding retained_intron MGP_CBAJ_T0088499.1 MGP_CBAJ_G0033303.1 mouse_genomes_project 8 66682981 66690095 + Ddx60 protein_coding retained_intron MGP_CBAJ_T0087853.1 MGP_CBAJ_G0033090.1 mouse_genomes_project 8 20267323 20279271 - MGP_CBAJ_P0087853 Gm6040 protein_coding protein_coding MGP_CBAJ_T0089173.1 MGP_CBAJ_G0033520.1 mouse_genomes_project 8 91417603 91420573 - MGP_CBAJ_P0089173 Nanos3 protein_coding protein_coding MGP_CBAJ_T0089404.1 MGP_CBAJ_G0033578.1 mouse_genomes_project 8 95699843 95737476 + MGP_CBAJ_P0089404 Heatr3 protein_coding protein_coding MGP_CBAJ_T0089405.1 MGP_CBAJ_G0033578.1 mouse_genomes_project 8 95722583 95724264 + Heatr3 protein_coding retained_intron MGP_CBAJ_T0089406.1 MGP_CBAJ_G0033578.1 mouse_genomes_project 8 95726961 95737469 + Heatr3 protein_coding retained_intron MGP_CBAJ_T0089407.1 MGP_CBAJ_G0033578.1 mouse_genomes_project 8 95729924 95732496 + Heatr3 protein_coding retained_intron MGP_CBAJ_T0089564.1 MGP_CBAJ_G0033631.1 mouse_genomes_project 8 103049504 103077128 - MGP_CBAJ_P0089564 Ciapin1 protein_coding protein_coding MGP_CBAJ_T0089565.1 MGP_CBAJ_G0033631.1 mouse_genomes_project 8 103052617 103053879 - Ciapin1 protein_coding retained_intron MGP_CBAJ_T0089566.1 MGP_CBAJ_G0033631.1 mouse_genomes_project 8 103052703 103056417 - Ciapin1 protein_coding processed_transcript MGP_CBAJ_T0089567.1 MGP_CBAJ_G0033631.1 mouse_genomes_project 8 103052779 103077043 - MGP_CBAJ_P0089567 Ciapin1 protein_coding protein_coding MGP_CBAJ_T0089568.1 MGP_CBAJ_G0033631.1 mouse_genomes_project 8 103053393 103065572 - MGP_CBAJ_P0089568 Ciapin1 protein_coding protein_coding MGP_CBAJ_T0089569.1 MGP_CBAJ_G0033631.1 mouse_genomes_project 8 103054321 103056415 - Ciapin1 protein_coding retained_intron MGP_CBAJ_T0089570.1 MGP_CBAJ_G0033631.1 mouse_genomes_project 8 103054904 103064853 - Ciapin1 protein_coding processed_transcript MGP_CBAJ_T0089571.1 MGP_CBAJ_G0033631.1 mouse_genomes_project 8 103057770 103077035 - MGP_CBAJ_P0089571 Ciapin1 protein_coding protein_coding MGP_CBAJ_T0089572.1 MGP_CBAJ_G0033631.1 mouse_genomes_project 8 103064804 103077031 - Ciapin1 protein_coding processed_transcript MGP_CBAJ_T0089573.1 MGP_CBAJ_G0033631.1 mouse_genomes_project 8 103065565 103076812 - Ciapin1 protein_coding processed_transcript MGP_CBAJ_T0009095.1 MGP_CBAJ_G0007297.1 mouse_genomes_project 8 134327526 134337954 + Gm26812 lincRNA lincRNA MGP_CBAJ_T0009096.1 MGP_CBAJ_G0007297.1 mouse_genomes_project 8 134329215 134337658 + Gm26812 lincRNA lincRNA MGP_CBAJ_T0089472.1 MGP_CBAJ_G0033598.1 mouse_genomes_project 8 100886001 100954708 + MGP_CBAJ_P0089472 Lpcat2 protein_coding protein_coding MGP_CBAJ_T0089473.1 MGP_CBAJ_G0033598.1 mouse_genomes_project 8 100886131 100903389 + Lpcat2 protein_coding processed_transcript MGP_CBAJ_T0089475.1 MGP_CBAJ_G0033598.1 mouse_genomes_project 8 100941647 100953469 + Lpcat2 protein_coding processed_transcript MGP_CBAJ_T0089620.1 MGP_CBAJ_G0033649.1 mouse_genomes_project 8 103850888 103885124 + MGP_CBAJ_P0089620 Ccdc113 protein_coding protein_coding MGP_CBAJ_T0087618.1 MGP_CBAJ_G0033007.1 mouse_genomes_project 8 2222571 2242105 - MGP_CBAJ_P0087618 Slc10a2 protein_coding protein_coding MGP_CBAJ_T0089250.1 MGP_CBAJ_G0033536.1 mouse_genomes_project 8 92100819 92103684 - MGP_CBAJ_P0089250 protein_coding protein_coding MGP_CBAJ_T0011586.1 MGP_CBAJ_G0009724.1 mouse_genomes_project 8 10420629 10420946 + Gm22207 misc_RNA misc_RNA MGP_CBAJ_T0011589.1 MGP_CBAJ_G0009727.1 mouse_genomes_project 8 32320988 32321212 - Gm23539 misc_RNA misc_RNA MGP_CBAJ_T0089498.1 MGP_CBAJ_G0033608.1 mouse_genomes_project 8 101452299 101465549 - MGP_CBAJ_P0089498 Ces1h protein_coding protein_coding MGP_CBAJ_T0088241.1 MGP_CBAJ_G0033232.1 mouse_genomes_project 8 45619896 45632822 - MGP_CBAJ_P0088241 Zfp42 protein_coding protein_coding MGP_CBAJ_T0089966.1 MGP_CBAJ_G0033785.1 mouse_genomes_project 8 121384428 121385298 - Il34 protein_coding processed_transcript MGP_CBAJ_T0089967.1 MGP_CBAJ_G0033785.1 mouse_genomes_project 8 121384439 121478278 - MGP_CBAJ_P0089967 Il34 protein_coding protein_coding MGP_CBAJ_T0089968.1 MGP_CBAJ_G0033785.1 mouse_genomes_project 8 121384878 121401983 - MGP_CBAJ_P0089968 Il34 protein_coding unknown_likely_coding MGP_CBAJ_T0089969.1 MGP_CBAJ_G0033785.1 mouse_genomes_project 8 121401342 121453416 - Il34 protein_coding processed_transcript MGP_CBAJ_T0089970.1 MGP_CBAJ_G0033785.1 mouse_genomes_project 8 121401631 121478330 - Il34 protein_coding processed_transcript MGP_CBAJ_T0088542.1 MGP_CBAJ_G0033318.1 mouse_genomes_project 8 71651116 71653137 + MGP_CBAJ_P0088542 Tktl2 protein_coding protein_coding MGP_CBAJ_T0088543.1 MGP_CBAJ_G0033318.1 mouse_genomes_project 8 71651119 71657688 + MGP_CBAJ_P0088543 Tktl2 protein_coding protein_coding MGP_CBAJ_T0088811.1 MGP_CBAJ_G0033396.1 mouse_genomes_project 8 76480281 76487184 - MGP_CBAJ_P0088811 Arrdc2 protein_coding protein_coding MGP_CBAJ_T0088176.1 MGP_CBAJ_G0033215.1 mouse_genomes_project 8 41445756 41524651 - MGP_CBAJ_P0088176 Msr1 protein_coding protein_coding MGP_CBAJ_T0088177.1 MGP_CBAJ_G0033215.1 mouse_genomes_project 8 41474688 41524651 - MGP_CBAJ_P0088177 Msr1 protein_coding protein_coding MGP_CBAJ_T0010894.1 MGP_CBAJ_G0009032.1 mouse_genomes_project 8 129218825 129218889 + Mir7078 miRNA miRNA MGP_CBAJ_T0087649.1 MGP_CBAJ_G0033024.1 mouse_genomes_project 8 9595721 9620903 - MGP_CBAJ_P0087649 Ankrd10 protein_coding protein_coding MGP_CBAJ_T0087650.1 MGP_CBAJ_G0033024.1 mouse_genomes_project 8 9598289 9620903 - MGP_CBAJ_P0087650 Ankrd10 protein_coding protein_coding MGP_CBAJ_T0090071.1 MGP_CBAJ_G0033815.1 mouse_genomes_project 8 124886433 125061239 - MGP_CBAJ_P0090071 Adamts18 protein_coding protein_coding MGP_CBAJ_T0089874.1 MGP_CBAJ_G0033751.1 mouse_genomes_project 8 117129325 117131811 - MGP_CBAJ_P0089874 Pdf protein_coding nonsense_mediated_decay MGP_CBAJ_T0089877.1 MGP_CBAJ_G0033751.1 mouse_genomes_project 8 117131144 117135148 - MGP_CBAJ_P0089877 Pdf protein_coding protein_coding MGP_CBAJ_T0009022.1 MGP_CBAJ_G0007247.1 mouse_genomes_project 8 91452087 91452774 + Gm26532 lincRNA lincRNA MGP_CBAJ_T0090421.1 MGP_CBAJ_G0033909.1 mouse_genomes_project 8 136006619 136043231 + MGP_CBAJ_P0090421 Spire2 protein_coding protein_coding MGP_CBAJ_T0087859.1 MGP_CBAJ_G0033096.1 mouse_genomes_project 8 21225341 21241227 + MGP_CBAJ_P0087859 Defb1 protein_coding protein_coding MGP_CBAJ_T0090450.1 MGP_CBAJ_G0033920.1 mouse_genomes_project 8 136584203 136584646 + MGP_CBAJ_P0090450 protein_coding protein_coding MGP_CBAJ_T0088666.1 MGP_CBAJ_G0033360.1 mouse_genomes_project 8 75708806 75724968 + MGP_CBAJ_P0088666 protein_coding protein_coding MGP_CBAJ_T0088667.1 MGP_CBAJ_G0033360.1 mouse_genomes_project 8 75708806 75724968 + MGP_CBAJ_P0088667 protein_coding protein_coding MGP_CBAJ_T0088668.1 MGP_CBAJ_G0033360.1 mouse_genomes_project 8 75708809 75724967 + MGP_CBAJ_P0088668 protein_coding protein_coding MGP_CBAJ_T0088669.1 MGP_CBAJ_G0033360.1 mouse_genomes_project 8 75708809 75724967 + MGP_CBAJ_P0088669 protein_coding protein_coding MGP_CBAJ_T0087567.1 MGP_CBAJ_G0032994.1 mouse_genomes_project 8 1266059 1275569 - MGP_CBAJ_P0087567 Prr36 protein_coding protein_coding MGP_CBAJ_T0087568.1 MGP_CBAJ_G0032994.1 mouse_genomes_project 8 1273305 1275169 - MGP_CBAJ_P0087568 Prr36 protein_coding protein_coding MGP_CBAJ_T0087569.1 MGP_CBAJ_G0032994.1 mouse_genomes_project 8 1274228 1275409 - MGP_CBAJ_P0087569 Prr36 protein_coding protein_coding MGP_CBAJ_T0087570.1 MGP_CBAJ_G0032994.1 mouse_genomes_project 8 1274664 1275716 - MGP_CBAJ_P0087570 Prr36 protein_coding protein_coding MGP_CBAJ_T0089015.1 MGP_CBAJ_G0033463.1 mouse_genomes_project 8 83242188 83253766 + MGP_CBAJ_P0089015 Nr3c2 protein_coding protein_coding MGP_CBAJ_T0089016.1 MGP_CBAJ_G0033463.1 mouse_genomes_project 8 83242518 83640634 + MGP_CBAJ_P0089016 Nr3c2 protein_coding protein_coding MGP_CBAJ_T0089017.1 MGP_CBAJ_G0033463.1 mouse_genomes_project 8 83245154 83640629 + MGP_CBAJ_P0089017 Nr3c2 protein_coding protein_coding MGP_CBAJ_T0089018.1 MGP_CBAJ_G0033463.1 mouse_genomes_project 8 83245154 83638618 + MGP_CBAJ_P0089018 Nr3c2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089019.1 MGP_CBAJ_G0033463.1 mouse_genomes_project 8 83245213 83254009 + MGP_CBAJ_P0089019 Nr3c2 protein_coding protein_coding MGP_CBAJ_T0089020.1 MGP_CBAJ_G0033463.1 mouse_genomes_project 8 83245342 83639285 + MGP_CBAJ_P0089020 Nr3c2 protein_coding protein_coding MGP_CBAJ_T0089021.1 MGP_CBAJ_G0033463.1 mouse_genomes_project 8 83253624 83638152 + MGP_CBAJ_P0089021 Nr3c2 protein_coding protein_coding MGP_CBAJ_T0089022.1 MGP_CBAJ_G0033463.1 mouse_genomes_project 8 83499581 83572685 + Nr3c2 protein_coding processed_transcript MGP_CBAJ_T0089512.1 MGP_CBAJ_G0033611.1 mouse_genomes_project 8 102133737 102178065 - MGP_CBAJ_P0089512 Amfr protein_coding protein_coding MGP_CBAJ_T0089513.1 MGP_CBAJ_G0033611.1 mouse_genomes_project 8 102135051 102137066 - Amfr protein_coding retained_intron MGP_CBAJ_T0089514.1 MGP_CBAJ_G0033611.1 mouse_genomes_project 8 102135107 102136111 - Amfr protein_coding processed_transcript MGP_CBAJ_T0089515.1 MGP_CBAJ_G0033611.1 mouse_genomes_project 8 102162226 102177529 - MGP_CBAJ_P0089515 Amfr protein_coding protein_coding MGP_CBAJ_T0089722.1 MGP_CBAJ_G0033689.1 mouse_genomes_project 8 115064727 115067243 - MGP_CBAJ_P0089722 B3gnt9 protein_coding protein_coding MGP_CBAJ_T0089723.1 MGP_CBAJ_G0033689.1 mouse_genomes_project 8 115064728 115067241 - MGP_CBAJ_P0089723 B3gnt9 protein_coding protein_coding MGP_CBAJ_T0089724.1 MGP_CBAJ_G0033689.1 mouse_genomes_project 8 115066411 115067241 - MGP_CBAJ_P0089724 B3gnt9 protein_coding protein_coding MGP_CBAJ_T0087770.1 MGP_CBAJ_G0033057.1 mouse_genomes_project 8 12134441 12135239 + MGP_CBAJ_P0087770 protein_coding protein_coding MGP_CBAJ_T0018191.1 MGP_CBAJ_G0015449.1 mouse_genomes_project 8 17364558 17392364 - Gm16725 processed_transcript processed_transcript MGP_CBAJ_T0090179.1 MGP_CBAJ_G0033855.1 mouse_genomes_project 8 132234949 132257207 - MGP_CBAJ_P0090179 Zdhhc7 protein_coding protein_coding MGP_CBAJ_T0090180.1 MGP_CBAJ_G0033855.1 mouse_genomes_project 8 132236257 132240604 - Zdhhc7 protein_coding retained_intron MGP_CBAJ_T0090181.1 MGP_CBAJ_G0033855.1 mouse_genomes_project 8 132238990 132241844 - Zdhhc7 protein_coding retained_intron MGP_CBAJ_T0090182.1 MGP_CBAJ_G0033855.1 mouse_genomes_project 8 132239180 132242037 - Zdhhc7 protein_coding retained_intron MGP_CBAJ_T0090183.1 MGP_CBAJ_G0033855.1 mouse_genomes_project 8 132248701 132256797 - Zdhhc7 protein_coding processed_transcript MGP_CBAJ_T0090101.1 MGP_CBAJ_G0033824.1 mouse_genomes_project 8 128600043 128619261 + MGP_CBAJ_P0090101 Cenpn protein_coding unknown_likely_coding MGP_CBAJ_T0088598.1 MGP_CBAJ_G0033334.1 mouse_genomes_project 8 74746235 74772735 + MGP_CBAJ_P0088598 D130040H23Rik protein_coding unknown_likely_coding MGP_CBAJ_T0088599.1 MGP_CBAJ_G0033334.1 mouse_genomes_project 8 74767284 74769660 + MGP_CBAJ_P0088599 D130040H23Rik protein_coding protein_coding MGP_CBAJ_T0088405.1 MGP_CBAJ_G0033281.1 mouse_genomes_project 8 58361495 58463673 - MGP_CBAJ_P0088405 Wdr17 protein_coding protein_coding MGP_CBAJ_T0088406.1 MGP_CBAJ_G0033281.1 mouse_genomes_project 8 58361673 58469382 - MGP_CBAJ_P0088406 Wdr17 protein_coding protein_coding MGP_CBAJ_T0088407.1 MGP_CBAJ_G0033281.1 mouse_genomes_project 8 58361687 58469498 - MGP_CBAJ_P0088407 Wdr17 protein_coding protein_coding MGP_CBAJ_T0088408.1 MGP_CBAJ_G0033281.1 mouse_genomes_project 8 58362076 58392785 - Wdr17 protein_coding retained_intron MGP_CBAJ_T0088409.1 MGP_CBAJ_G0033281.1 mouse_genomes_project 8 58362085 58469362 - MGP_CBAJ_P0088409 Wdr17 protein_coding protein_coding MGP_CBAJ_T0088410.1 MGP_CBAJ_G0033281.1 mouse_genomes_project 8 58408758 58435721 - MGP_CBAJ_P0088410 Wdr17 protein_coding protein_coding MGP_CBAJ_T0088411.1 MGP_CBAJ_G0033281.1 mouse_genomes_project 8 58408802 58469344 - Wdr17 protein_coding processed_transcript MGP_CBAJ_T0088412.1 MGP_CBAJ_G0033281.1 mouse_genomes_project 8 58433011 58469342 - MGP_CBAJ_P0088412 Wdr17 protein_coding protein_coding MGP_CBAJ_T0088413.1 MGP_CBAJ_G0033281.1 mouse_genomes_project 8 58433343 58469468 - Wdr17 protein_coding processed_transcript MGP_CBAJ_T0088414.1 MGP_CBAJ_G0033281.1 mouse_genomes_project 8 58438892 58634519 - MGP_CBAJ_P0088414 Wdr17 protein_coding protein_coding MGP_CBAJ_T0088415.1 MGP_CBAJ_G0033281.1 mouse_genomes_project 8 58441932 58452026 - MGP_CBAJ_P0088415 Wdr17 protein_coding protein_coding MGP_CBAJ_T0008978.1 MGP_CBAJ_G0007210.1 mouse_genomes_project 8 26986205 26996884 - lincRNA lincRNA MGP_CBAJ_T0002302.1 MGP_CBAJ_G0002215.1 mouse_genomes_project 8 132265169 132266694 + TEC TEC MGP_CBAJ_T0089581.1 MGP_CBAJ_G0033633.1 mouse_genomes_project 8 103099674 103110985 + MGP_CBAJ_P0089581 Polr2c protein_coding protein_coding MGP_CBAJ_T0089582.1 MGP_CBAJ_G0033633.1 mouse_genomes_project 8 103099780 103110339 + MGP_CBAJ_P0089582 Polr2c protein_coding unknown_likely_coding MGP_CBAJ_T0009077.1 MGP_CBAJ_G0007282.1 mouse_genomes_project 8 121535607 121630542 - Gm26816 lincRNA lincRNA MGP_CBAJ_T0100832.1 MGP_CBAJ_G0039087.1 mouse_genomes_project 8 120333026 120333111 + Snord71 snoRNA snoRNA MGP_CBAJ_T0088383.1 MGP_CBAJ_G0033273.1 mouse_genomes_project 8 51205315 51444815 - MGP_CBAJ_P0088383 Tenm3 protein_coding protein_coding MGP_CBAJ_T0088384.1 MGP_CBAJ_G0033273.1 mouse_genomes_project 8 51207331 51882835 - MGP_CBAJ_P0088384 Tenm3 protein_coding protein_coding MGP_CBAJ_T0088385.1 MGP_CBAJ_G0033273.1 mouse_genomes_project 8 51207354 51696534 - MGP_CBAJ_P0088385 Tenm3 protein_coding protein_coding MGP_CBAJ_T0088386.1 MGP_CBAJ_G0033273.1 mouse_genomes_project 8 51263242 51287404 - Tenm3 protein_coding processed_transcript MGP_CBAJ_T0088387.1 MGP_CBAJ_G0033273.1 mouse_genomes_project 8 51321977 51559198 - MGP_CBAJ_P0088387 Tenm3 protein_coding protein_coding MGP_CBAJ_T0088388.1 MGP_CBAJ_G0033273.1 mouse_genomes_project 8 51385997 51559544 - MGP_CBAJ_P0088388 Tenm3 protein_coding protein_coding MGP_CBAJ_T0088389.1 MGP_CBAJ_G0033273.1 mouse_genomes_project 8 51385997 51559351 - MGP_CBAJ_P0088389 Tenm3 protein_coding protein_coding MGP_CBAJ_T0088561.1 MGP_CBAJ_G0033327.1 mouse_genomes_project 8 73741788 74131892 - MGP_CBAJ_P0088561 Csgalnact1 protein_coding protein_coding MGP_CBAJ_T0088562.1 MGP_CBAJ_G0033327.1 mouse_genomes_project 8 73742971 74131860 - MGP_CBAJ_P0088562 Csgalnact1 protein_coding protein_coding MGP_CBAJ_T0088563.1 MGP_CBAJ_G0033327.1 mouse_genomes_project 8 73774969 74131848 - MGP_CBAJ_P0088563 Csgalnact1 protein_coding protein_coding MGP_CBAJ_T0088564.1 MGP_CBAJ_G0033327.1 mouse_genomes_project 8 73853289 74131861 - Csgalnact1 protein_coding processed_transcript MGP_CBAJ_T0088565.1 MGP_CBAJ_G0033327.1 mouse_genomes_project 8 73951898 74131860 - Csgalnact1 protein_coding processed_transcript MGP_CBAJ_T0088566.1 MGP_CBAJ_G0033327.1 mouse_genomes_project 8 73951997 74131861 - Csgalnact1 protein_coding processed_transcript MGP_CBAJ_T0088567.1 MGP_CBAJ_G0033327.1 mouse_genomes_project 8 74042645 74131861 - Csgalnact1 protein_coding processed_transcript MGP_CBAJ_T0089917.1 MGP_CBAJ_G0033763.1 mouse_genomes_project 8 119946221 120001361 + MGP_CBAJ_P0089917 Pmfbp1 protein_coding protein_coding MGP_CBAJ_T0010825.1 MGP_CBAJ_G0008963.1 mouse_genomes_project 8 11076980 11077110 + Gm38671 miRNA miRNA MGP_CBAJ_T0089347.1 MGP_CBAJ_G0033561.1 mouse_genomes_project 8 92575426 92583575 + MGP_CBAJ_P0089347 Orc6 protein_coding protein_coding MGP_CBAJ_T0089176.1 MGP_CBAJ_G0033523.1 mouse_genomes_project 8 91492711 91500123 - MGP_CBAJ_P0089176 Mri1 protein_coding protein_coding MGP_CBAJ_T0089177.1 MGP_CBAJ_G0033523.1 mouse_genomes_project 8 91493826 91499212 - MGP_CBAJ_P0089177 Mri1 protein_coding protein_coding MGP_CBAJ_T0089178.1 MGP_CBAJ_G0033523.1 mouse_genomes_project 8 91496660 91500046 - MGP_CBAJ_P0089178 Mri1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089179.1 MGP_CBAJ_G0033523.1 mouse_genomes_project 8 91496974 91500125 - Mri1 protein_coding processed_transcript MGP_CBAJ_T0089180.1 MGP_CBAJ_G0033523.1 mouse_genomes_project 8 91498588 91500125 - Mri1 protein_coding retained_intron MGP_CBAJ_T0090448.1 MGP_CBAJ_G0033919.1 mouse_genomes_project 8 136571148 136591660 - MGP_CBAJ_P0090448 Ccsap protein_coding protein_coding MGP_CBAJ_T0090449.1 MGP_CBAJ_G0033919.1 mouse_genomes_project 8 136571161 136592339 - MGP_CBAJ_P0090449 Ccsap protein_coding protein_coding MGP_CBAJ_T0088208.1 MGP_CBAJ_G0033223.1 mouse_genomes_project 8 42904396 42967092 + MGP_CBAJ_P0088208 Slc7a2 protein_coding protein_coding MGP_CBAJ_T0088209.1 MGP_CBAJ_G0033223.1 mouse_genomes_project 8 42904412 42971348 + MGP_CBAJ_P0088209 Slc7a2 protein_coding protein_coding MGP_CBAJ_T0088210.1 MGP_CBAJ_G0033223.1 mouse_genomes_project 8 42904578 42943719 + MGP_CBAJ_P0088210 Slc7a2 protein_coding protein_coding MGP_CBAJ_T0088211.1 MGP_CBAJ_G0033223.1 mouse_genomes_project 8 42918414 42971110 + MGP_CBAJ_P0088211 Slc7a2 protein_coding protein_coding MGP_CBAJ_T0088212.1 MGP_CBAJ_G0033223.1 mouse_genomes_project 8 42943172 42966762 + MGP_CBAJ_P0088212 Slc7a2 protein_coding protein_coding MGP_CBAJ_T0010848.1 MGP_CBAJ_G0008986.1 mouse_genomes_project 8 76443556 76443614 + Mir7240 miRNA miRNA MGP_CBAJ_T0089093.1 MGP_CBAJ_G0033488.1 mouse_genomes_project 8 89889295 89899870 - MGP_CBAJ_P0089093 Zfp330 protein_coding protein_coding MGP_CBAJ_T0088334.1 MGP_CBAJ_G0033256.1 mouse_genomes_project 8 49273281 49306902 + MGP_CBAJ_P0088334 Cenpu protein_coding nonsense_mediated_decay MGP_CBAJ_T0088335.1 MGP_CBAJ_G0033256.1 mouse_genomes_project 8 49273286 49306479 + MGP_CBAJ_P0088335 Cenpu protein_coding protein_coding MGP_CBAJ_T0088336.1 MGP_CBAJ_G0033256.1 mouse_genomes_project 8 49273287 49277632 + Cenpu protein_coding retained_intron MGP_CBAJ_T0088337.1 MGP_CBAJ_G0033256.1 mouse_genomes_project 8 49273313 49305263 + MGP_CBAJ_P0088337 Cenpu protein_coding unknown_likely_coding MGP_CBAJ_T0088338.1 MGP_CBAJ_G0033256.1 mouse_genomes_project 8 49273313 49305263 + MGP_CBAJ_P0088338 Cenpu protein_coding protein_coding MGP_CBAJ_T0088339.1 MGP_CBAJ_G0033256.1 mouse_genomes_project 8 49281472 49283851 + Cenpu protein_coding processed_transcript MGP_CBAJ_T0088340.1 MGP_CBAJ_G0033256.1 mouse_genomes_project 8 49283121 49298322 + Cenpu protein_coding retained_intron MGP_CBAJ_T0088341.1 MGP_CBAJ_G0033256.1 mouse_genomes_project 8 49298664 49305273 + Cenpu protein_coding retained_intron MGP_CBAJ_T0100830.1 MGP_CBAJ_G0039085.1 mouse_genomes_project 8 104778602 104778734 - Gm22780 snoRNA snoRNA MGP_CBAJ_T0099544.1 MGP_CBAJ_G0037799.1 mouse_genomes_project 8 44990840 44990946 + Gm26181 snRNA snRNA MGP_CBAJ_T0089551.1 MGP_CBAJ_G0033625.1 mouse_genomes_project 8 102830806 102890090 + MGP_CBAJ_P0089551 Rspry1 protein_coding protein_coding MGP_CBAJ_T0089552.1 MGP_CBAJ_G0033625.1 mouse_genomes_project 8 102830829 102851240 + MGP_CBAJ_P0089552 Rspry1 protein_coding protein_coding MGP_CBAJ_T0089553.1 MGP_CBAJ_G0033625.1 mouse_genomes_project 8 102854359 102857918 + Rspry1 protein_coding retained_intron MGP_CBAJ_T0087949.1 MGP_CBAJ_G0033135.1 mouse_genomes_project 8 24350459 24379016 - Ido2 protein_coding processed_transcript MGP_CBAJ_T0087950.1 MGP_CBAJ_G0033135.1 mouse_genomes_project 8 24351019 24406970 - MGP_CBAJ_P0087950 Ido2 protein_coding protein_coding MGP_CBAJ_T0087951.1 MGP_CBAJ_G0033135.1 mouse_genomes_project 8 24352017 24359376 - Ido2 protein_coding retained_intron MGP_CBAJ_T0087952.1 MGP_CBAJ_G0033135.1 mouse_genomes_project 8 24375176 24378973 - Ido2 protein_coding processed_transcript MGP_CBAJ_T0090114.1 MGP_CBAJ_G0033831.1 mouse_genomes_project 8 128986998 129221104 + MGP_CBAJ_P0090114 Cmip protein_coding protein_coding MGP_CBAJ_T0090115.1 MGP_CBAJ_G0033831.1 mouse_genomes_project 8 129093973 129221104 + MGP_CBAJ_P0090115 Cmip protein_coding protein_coding MGP_CBAJ_T0090145.1 MGP_CBAJ_G0033842.1 mouse_genomes_project 8 131561262 131616530 - MGP_CBAJ_P0090145 Mbtps1 protein_coding protein_coding MGP_CBAJ_T0090146.1 MGP_CBAJ_G0033842.1 mouse_genomes_project 8 131561262 131616530 - MGP_CBAJ_P0090146 Mbtps1 protein_coding protein_coding MGP_CBAJ_T0002298.1 MGP_CBAJ_G0002211.1 mouse_genomes_project 8 115493462 115494678 + TEC TEC MGP_CBAJ_T0088523.1 MGP_CBAJ_G0033314.1 mouse_genomes_project 8 69967936 69973518 - MGP_CBAJ_P0088523 protein_coding protein_coding MGP_CBAJ_T0088524.1 MGP_CBAJ_G0033314.1 mouse_genomes_project 8 69969877 69990250 - protein_coding processed_transcript MGP_CBAJ_T0088525.1 MGP_CBAJ_G0033314.1 mouse_genomes_project 8 69981650 69990326 - MGP_CBAJ_P0088525 protein_coding protein_coding MGP_CBAJ_T0088526.1 MGP_CBAJ_G0033314.1 mouse_genomes_project 8 69981650 69990483 - MGP_CBAJ_P0088526 protein_coding protein_coding MGP_CBAJ_T0089921.1 MGP_CBAJ_G0033766.1 mouse_genomes_project 8 120036106 120040151 - MGP_CBAJ_P0089921 Hp protein_coding protein_coding MGP_CBAJ_T0010835.1 MGP_CBAJ_G0008973.1 mouse_genomes_project 8 25056713 25056822 - Mir8108 miRNA miRNA MGP_CBAJ_T0090149.1 MGP_CBAJ_G0033845.1 mouse_genomes_project 8 131667865 131677652 - MGP_CBAJ_P0090149 Taf1c protein_coding protein_coding MGP_CBAJ_T0090150.1 MGP_CBAJ_G0033845.1 mouse_genomes_project 8 131667865 131677652 - MGP_CBAJ_P0090150 Taf1c protein_coding nonsense_mediated_decay MGP_CBAJ_T0090151.1 MGP_CBAJ_G0033845.1 mouse_genomes_project 8 131668709 131669736 - Taf1c protein_coding processed_transcript MGP_CBAJ_T0090152.1 MGP_CBAJ_G0033845.1 mouse_genomes_project 8 131669277 131670604 - Taf1c protein_coding retained_intron MGP_CBAJ_T0090153.1 MGP_CBAJ_G0033845.1 mouse_genomes_project 8 131669518 131671469 - Taf1c protein_coding processed_transcript MGP_CBAJ_T0087972.1 MGP_CBAJ_G0033140.1 mouse_genomes_project 8 24684027 24809837 - MGP_CBAJ_P0087972 Adam32 protein_coding protein_coding MGP_CBAJ_T0087973.1 MGP_CBAJ_G0033140.1 mouse_genomes_project 8 24684030 24712520 - Adam32 protein_coding retained_intron MGP_CBAJ_T0087974.1 MGP_CBAJ_G0033140.1 mouse_genomes_project 8 24684030 24721765 - MGP_CBAJ_P0087974 Adam32 protein_coding protein_coding MGP_CBAJ_T0087975.1 MGP_CBAJ_G0033140.1 mouse_genomes_project 8 24684033 24809828 - MGP_CBAJ_P0087975 Adam32 protein_coding protein_coding MGP_CBAJ_T0087976.1 MGP_CBAJ_G0033140.1 mouse_genomes_project 8 24684033 24734054 - MGP_CBAJ_P0087976 Adam32 protein_coding protein_coding MGP_CBAJ_T0087977.1 MGP_CBAJ_G0033140.1 mouse_genomes_project 8 24684092 24711392 - MGP_CBAJ_P0087977 Adam32 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087978.1 MGP_CBAJ_G0033140.1 mouse_genomes_project 8 24685698 24809828 - MGP_CBAJ_P0087978 Adam32 protein_coding unknown_likely_coding MGP_CBAJ_T0087979.1 MGP_CBAJ_G0033140.1 mouse_genomes_project 8 24766960 24809814 - MGP_CBAJ_P0087979 Adam32 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087980.1 MGP_CBAJ_G0033140.1 mouse_genomes_project 8 24781222 24809837 - Adam32 protein_coding retained_intron MGP_CBAJ_T0088636.1 MGP_CBAJ_G0033347.1 mouse_genomes_project 8 75415416 75422734 - MGP_CBAJ_P0088636 Cilp2 protein_coding protein_coding MGP_CBAJ_T0087935.1 MGP_CBAJ_G0033127.1 mouse_genomes_project 8 22797058 22802740 + MGP_CBAJ_P0087935 Nkx6-3 protein_coding protein_coding MGP_CBAJ_T0088998.1 MGP_CBAJ_G0033456.1 mouse_genomes_project 8 80982508 81005833 + MGP_CBAJ_P0088998 Isx protein_coding protein_coding MGP_CBAJ_T0088999.1 MGP_CBAJ_G0033456.1 mouse_genomes_project 8 80982875 81005474 + MGP_CBAJ_P0088999 Isx protein_coding protein_coding MGP_CBAJ_T0009063.1 MGP_CBAJ_G0007273.1 mouse_genomes_project 8 102632588 102643838 - 9330175E14Rik lincRNA lincRNA MGP_CBAJ_T0009064.1 MGP_CBAJ_G0007273.1 mouse_genomes_project 8 102639504 102643963 - 9330175E14Rik lincRNA lincRNA MGP_CBAJ_T0009065.1 MGP_CBAJ_G0007273.1 mouse_genomes_project 8 102642807 102644793 - 9330175E14Rik lincRNA lincRNA MGP_CBAJ_T0009028.1 MGP_CBAJ_G0007253.1 mouse_genomes_project 8 94575686 94668996 + Gm27246 lincRNA lincRNA MGP_CBAJ_T0090564.1 MGP_CBAJ_G0033957.1 mouse_genomes_project 8 141722780 141882852 + MGP_CBAJ_P0090564 Nrp1 protein_coding protein_coding MGP_CBAJ_T0089705.1 MGP_CBAJ_G0033684.1 mouse_genomes_project 8 114750042 114764220 + MGP_CBAJ_P0089705 Ces2h protein_coding protein_coding MGP_CBAJ_T0087913.1 MGP_CBAJ_G0033123.1 mouse_genomes_project 8 22341515 22373783 + MGP_CBAJ_P0087913 Plat protein_coding protein_coding MGP_CBAJ_T0088958.1 MGP_CBAJ_G0033438.1 mouse_genomes_project 8 78080198 78103079 + MGP_CBAJ_P0088958 Rab8a protein_coding protein_coding MGP_CBAJ_T0088959.1 MGP_CBAJ_G0033438.1 mouse_genomes_project 8 78080311 78095031 + Rab8a protein_coding processed_transcript MGP_CBAJ_T0088960.1 MGP_CBAJ_G0033438.1 mouse_genomes_project 8 78080357 78095225 + Rab8a protein_coding retained_intron MGP_CBAJ_T0100835.1 MGP_CBAJ_G0039090.1 mouse_genomes_project 8 121610418 121610566 + Gm26132 snoRNA snoRNA MGP_CBAJ_T0002304.1 MGP_CBAJ_G0002217.1 mouse_genomes_project 8 132942209 132943076 + TEC TEC MGP_CBAJ_T0009061.1 MGP_CBAJ_G0007271.1 mouse_genomes_project 8 101891870 101955733 - Gm26843 lincRNA lincRNA MGP_CBAJ_T0090210.1 MGP_CBAJ_G0033862.1 mouse_genomes_project 8 132907741 132921823 - MGP_CBAJ_P0090210 Emc8 protein_coding protein_coding MGP_CBAJ_T0090211.1 MGP_CBAJ_G0033862.1 mouse_genomes_project 8 132909805 132921857 - Emc8 protein_coding retained_intron MGP_CBAJ_T0090212.1 MGP_CBAJ_G0033862.1 mouse_genomes_project 8 132911678 132922418 - MGP_CBAJ_P0090212 Emc8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090213.1 MGP_CBAJ_G0033862.1 mouse_genomes_project 8 132911851 132921608 - MGP_CBAJ_P0090213 Emc8 protein_coding protein_coding MGP_CBAJ_T0090214.1 MGP_CBAJ_G0033862.1 mouse_genomes_project 8 132911877 132921681 - MGP_CBAJ_P0090214 Emc8 protein_coding protein_coding MGP_CBAJ_T0090215.1 MGP_CBAJ_G0033862.1 mouse_genomes_project 8 132913801 132921848 - MGP_CBAJ_P0090215 Emc8 protein_coding protein_coding MGP_CBAJ_T0090216.1 MGP_CBAJ_G0033862.1 mouse_genomes_project 8 132914474 132921958 - Emc8 protein_coding retained_intron MGP_CBAJ_T0087862.1 MGP_CBAJ_G0033099.1 mouse_genomes_project 8 21337986 21338322 + MGP_CBAJ_P0087862 Defb10 protein_coding protein_coding MGP_CBAJ_T0011591.1 MGP_CBAJ_G0009729.1 mouse_genomes_project 8 48807023 48807296 + Gm23030 misc_RNA misc_RNA MGP_CBAJ_T0089424.1 MGP_CBAJ_G0033582.1 mouse_genomes_project 8 96135603 96214799 + MGP_CBAJ_P0089424 Nkd1 protein_coding protein_coding MGP_CBAJ_T0089425.1 MGP_CBAJ_G0033582.1 mouse_genomes_project 8 96141907 96214799 + MGP_CBAJ_P0089425 Nkd1 protein_coding protein_coding MGP_CBAJ_T0088092.1 MGP_CBAJ_G0033180.1 mouse_genomes_project 8 31853340 31869144 + MGP_CBAJ_P0088092 Tti2 protein_coding protein_coding MGP_CBAJ_T0090492.1 MGP_CBAJ_G0033937.1 mouse_genomes_project 8 137739853 137769856 + MGP_CBAJ_P0090492 Gnpat protein_coding protein_coding MGP_CBAJ_T0090493.1 MGP_CBAJ_G0033937.1 mouse_genomes_project 8 137739892 137766527 + MGP_CBAJ_P0090493 Gnpat protein_coding protein_coding MGP_CBAJ_T0090494.1 MGP_CBAJ_G0033937.1 mouse_genomes_project 8 137763244 137766848 + Gnpat protein_coding retained_intron MGP_CBAJ_T0090495.1 MGP_CBAJ_G0033937.1 mouse_genomes_project 8 137763313 137769347 + Gnpat protein_coding retained_intron MGP_CBAJ_T0090496.1 MGP_CBAJ_G0033937.1 mouse_genomes_project 8 137765295 137766706 + Gnpat protein_coding retained_intron MGP_CBAJ_T0090497.1 MGP_CBAJ_G0033937.1 mouse_genomes_project 8 137767427 137769417 + Gnpat protein_coding retained_intron MGP_CBAJ_T0005300.1 MGP_CBAJ_G0004486.1 mouse_genomes_project 8 115425336 115427710 + Gm38250 antisense antisense MGP_CBAJ_T0005301.1 MGP_CBAJ_G0004486.1 mouse_genomes_project 8 115425363 115437040 + Gm38250 antisense antisense MGP_CBAJ_T0090425.1 MGP_CBAJ_G0033912.1 mouse_genomes_project 8 136093709 136104463 + MGP_CBAJ_P0090425 Tubb3 protein_coding protein_coding MGP_CBAJ_T0090093.1 MGP_CBAJ_G0033821.1 mouse_genomes_project 8 128078870 128089709 + MGP_CBAJ_P0090093 Dynlrb2 protein_coding protein_coding MGP_CBAJ_T0002306.1 MGP_CBAJ_G0002219.1 mouse_genomes_project 8 134441508 134442306 - TEC TEC MGP_CBAJ_T0090403.1 MGP_CBAJ_G0033907.1 mouse_genomes_project 8 135918155 135933485 + MGP_CBAJ_P0090403 Zfp276 protein_coding protein_coding MGP_CBAJ_T0090404.1 MGP_CBAJ_G0033907.1 mouse_genomes_project 8 135918231 135921597 + Zfp276 protein_coding retained_intron MGP_CBAJ_T0090405.1 MGP_CBAJ_G0033907.1 mouse_genomes_project 8 135918244 135933483 + Zfp276 protein_coding retained_intron MGP_CBAJ_T0090406.1 MGP_CBAJ_G0033907.1 mouse_genomes_project 8 135918646 135928810 + MGP_CBAJ_P0090406 Zfp276 protein_coding protein_coding MGP_CBAJ_T0090407.1 MGP_CBAJ_G0033907.1 mouse_genomes_project 8 135922283 135931862 + Zfp276 protein_coding retained_intron MGP_CBAJ_T0090408.1 MGP_CBAJ_G0033907.1 mouse_genomes_project 8 135923415 135931657 + Zfp276 protein_coding retained_intron MGP_CBAJ_T0090409.1 MGP_CBAJ_G0033907.1 mouse_genomes_project 8 135928560 135929383 + Zfp276 protein_coding retained_intron MGP_CBAJ_T0087538.1 MGP_CBAJ_G0032984.1 mouse_genomes_project 8 673497 676127 + MGP_CBAJ_P0087538 Mcemp1 protein_coding protein_coding MGP_CBAJ_T0090195.1 MGP_CBAJ_G0033858.1 mouse_genomes_project 8 132414058 132794737 + MGP_CBAJ_P0090195 Gse1 protein_coding protein_coding MGP_CBAJ_T0090196.1 MGP_CBAJ_G0033858.1 mouse_genomes_project 8 132704114 132822775 + MGP_CBAJ_P0090196 Gse1 protein_coding protein_coding MGP_CBAJ_T0090197.1 MGP_CBAJ_G0033858.1 mouse_genomes_project 8 132772550 132820865 + MGP_CBAJ_P0090197 Gse1 protein_coding protein_coding MGP_CBAJ_T0090198.1 MGP_CBAJ_G0033858.1 mouse_genomes_project 8 132774109 132820711 + MGP_CBAJ_P0090198 Gse1 protein_coding protein_coding MGP_CBAJ_T0090199.1 MGP_CBAJ_G0033858.1 mouse_genomes_project 8 132794688 132822770 + MGP_CBAJ_P0090199 Gse1 protein_coding unknown_likely_coding MGP_CBAJ_T0090200.1 MGP_CBAJ_G0033858.1 mouse_genomes_project 8 132812613 132814657 + Gse1 protein_coding retained_intron MGP_CBAJ_T0090201.1 MGP_CBAJ_G0033858.1 mouse_genomes_project 8 132812661 132816595 + Gse1 protein_coding processed_transcript MGP_CBAJ_T0100808.1 MGP_CBAJ_G0039063.1 mouse_genomes_project 8 67480209 67480323 + Gm22324 snoRNA snoRNA MGP_CBAJ_T0002293.1 MGP_CBAJ_G0002207.1 mouse_genomes_project 8 81815366 81815773 - TEC TEC MGP_CBAJ_T0088367.1 MGP_CBAJ_G0033265.1 mouse_genomes_project 8 50544447 50552427 - MGP_CBAJ_P0088367 Ing2 protein_coding protein_coding MGP_CBAJ_T0088368.1 MGP_CBAJ_G0033265.1 mouse_genomes_project 8 50544447 50550958 - MGP_CBAJ_P0088368 Ing2 protein_coding protein_coding MGP_CBAJ_T0088369.1 MGP_CBAJ_G0033265.1 mouse_genomes_project 8 50546024 50552825 - MGP_CBAJ_P0088369 Ing2 protein_coding protein_coding MGP_CBAJ_T0090349.1 MGP_CBAJ_G0033895.1 mouse_genomes_project 8 135444130 135463360 + MGP_CBAJ_P0090349 Cdh15 protein_coding protein_coding MGP_CBAJ_T0087890.1 MGP_CBAJ_G0033114.1 mouse_genomes_project 8 21830959 21919139 + MGP_CBAJ_P0087890 Tpte protein_coding protein_coding MGP_CBAJ_T0018199.1 MGP_CBAJ_G0015454.1 mouse_genomes_project 8 47599882 47608540 - processed_transcript processed_transcript MGP_CBAJ_T0015774.1 MGP_CBAJ_G0013886.1 mouse_genomes_project 8 102609045 102609632 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0090487.1 MGP_CBAJ_G0033933.1 mouse_genomes_project 8 137582214 137596510 + MGP_CBAJ_P0090487 Arv1 protein_coding protein_coding MGP_CBAJ_T0089353.1 MGP_CBAJ_G0033563.1 mouse_genomes_project 8 92699458 92728038 - MGP_CBAJ_P0089353 4921524J17Rik protein_coding protein_coding MGP_CBAJ_T0009052.1 MGP_CBAJ_G0007268.1 mouse_genomes_project 8 100292908 100326185 - Crnde lincRNA lincRNA MGP_CBAJ_T0009053.1 MGP_CBAJ_G0007268.1 mouse_genomes_project 8 100292908 100326474 - Crnde lincRNA lincRNA MGP_CBAJ_T0009054.1 MGP_CBAJ_G0007268.1 mouse_genomes_project 8 100292908 100313648 - Crnde lincRNA lincRNA MGP_CBAJ_T0009055.1 MGP_CBAJ_G0007268.1 mouse_genomes_project 8 100293120 100326245 - Crnde lincRNA lincRNA MGP_CBAJ_T0009056.1 MGP_CBAJ_G0007268.1 mouse_genomes_project 8 100303030 100326118 - Crnde lincRNA lincRNA MGP_CBAJ_T0009058.1 MGP_CBAJ_G0007268.1 mouse_genomes_project 8 100311689 100313648 - Crnde lincRNA lincRNA MGP_CBAJ_T0009059.1 MGP_CBAJ_G0007268.1 mouse_genomes_project 8 100313708 100326223 - Crnde lincRNA lincRNA MGP_CBAJ_T0088109.1 MGP_CBAJ_G0033190.1 mouse_genomes_project 8 34602246 34622216 + MGP_CBAJ_P0088109 Ppp2cb protein_coding protein_coding MGP_CBAJ_T0018193.1 MGP_CBAJ_G0015451.1 mouse_genomes_project 8 25515441 25522867 - Gm16159 processed_transcript processed_transcript MGP_CBAJ_T0018194.1 MGP_CBAJ_G0015451.1 mouse_genomes_project 8 25519461 25520344 - Gm16159 processed_transcript processed_transcript MGP_CBAJ_T0005310.1 MGP_CBAJ_G0004494.1 mouse_genomes_project 8 125612438 125626565 - 4933408N05Rik antisense antisense MGP_CBAJ_T0099560.1 MGP_CBAJ_G0037815.1 mouse_genomes_project 8 84322167 84322273 + Gm23981 snRNA snRNA MGP_CBAJ_T0087625.1 MGP_CBAJ_G0033013.1 mouse_genomes_project 8 7717072 7726156 - MGP_CBAJ_P0087625 Lig4 protein_coding protein_coding MGP_CBAJ_T0087626.1 MGP_CBAJ_G0033013.1 mouse_genomes_project 8 7717932 7727519 - MGP_CBAJ_P0087626 Lig4 protein_coding protein_coding MGP_CBAJ_T0089831.1 MGP_CBAJ_G0033734.1 mouse_genomes_project 8 115987091 116066644 + MGP_CBAJ_P0089831 Nfatc3 protein_coding protein_coding MGP_CBAJ_T0089832.1 MGP_CBAJ_G0033734.1 mouse_genomes_project 8 115987379 116062869 + MGP_CBAJ_P0089832 Nfatc3 protein_coding unknown_likely_coding MGP_CBAJ_T0009050.1 MGP_CBAJ_G0007266.1 mouse_genomes_project 8 99828480 99833978 - Gm28515 lincRNA lincRNA MGP_CBAJ_T0010871.1 MGP_CBAJ_G0009009.1 mouse_genomes_project 8 96698371 96698488 + Mir8110 miRNA miRNA MGP_CBAJ_T0100793.1 MGP_CBAJ_G0039048.1 mouse_genomes_project 8 25617033 25617163 + Gm24992 snoRNA snoRNA MGP_CBAJ_T0010880.1 MGP_CBAJ_G0009018.1 mouse_genomes_project 8 115126946 115127043 - Mir328 miRNA miRNA MGP_CBAJ_T0088081.1 MGP_CBAJ_G0033175.1 mouse_genomes_project 8 27720626 27780792 + MGP_CBAJ_P0088081 protein_coding protein_coding MGP_CBAJ_T0089110.1 MGP_CBAJ_G0033496.1 mouse_genomes_project 8 90743380 90744476 + MGP_CBAJ_P0089110 Olfr370 protein_coding protein_coding MGP_CBAJ_T0005327.1 MGP_CBAJ_G0004511.1 mouse_genomes_project 8 139715391 139746970 + Gm26759 antisense antisense MGP_CBAJ_T0009082.1 MGP_CBAJ_G0007287.1 mouse_genomes_project 8 132897520 132907515 + Gm26537 lincRNA lincRNA MGP_CBAJ_T0009057.1 MGP_CBAJ_G0007269.1 mouse_genomes_project 8 100303486 100306282 - Gm21817 lincRNA lincRNA MGP_CBAJ_T0088029.1 MGP_CBAJ_G0033151.1 mouse_genomes_project 8 25760632 25775709 + MGP_CBAJ_P0088029 protein_coding protein_coding MGP_CBAJ_T0090202.1 MGP_CBAJ_G0033859.1 mouse_genomes_project 8 132820017 132833106 - Gins2 protein_coding retained_intron MGP_CBAJ_T0090203.1 MGP_CBAJ_G0033859.1 mouse_genomes_project 8 132820017 132833430 - MGP_CBAJ_P0090203 Gins2 protein_coding protein_coding MGP_CBAJ_T0090204.1 MGP_CBAJ_G0033859.1 mouse_genomes_project 8 132822928 132829936 - Gins2 protein_coding retained_intron MGP_CBAJ_T0090205.1 MGP_CBAJ_G0033859.1 mouse_genomes_project 8 132823539 132833160 - Gins2 protein_coding processed_transcript MGP_CBAJ_T0099575.1 MGP_CBAJ_G0037830.1 mouse_genomes_project 8 123028785 123028892 + Gm22827 snRNA snRNA MGP_CBAJ_T0090158.1 MGP_CBAJ_G0033849.1 mouse_genomes_project 8 131793050 131854167 + MGP_CBAJ_P0090158 Atp2c2 protein_coding protein_coding MGP_CBAJ_T0089748.1 MGP_CBAJ_G0033700.1 mouse_genomes_project 8 115146967 115175222 - Fhod1 protein_coding retained_intron MGP_CBAJ_T0089749.1 MGP_CBAJ_G0033700.1 mouse_genomes_project 8 115146967 115175266 - MGP_CBAJ_P0089749 Fhod1 protein_coding protein_coding MGP_CBAJ_T0089750.1 MGP_CBAJ_G0033700.1 mouse_genomes_project 8 115148744 115149371 - Fhod1 protein_coding retained_intron MGP_CBAJ_T0089751.1 MGP_CBAJ_G0033700.1 mouse_genomes_project 8 115161784 115163139 - Fhod1 protein_coding retained_intron MGP_CBAJ_T0005266.1 MGP_CBAJ_G0004457.1 mouse_genomes_project 8 27238963 27239629 - Proscos antisense antisense MGP_CBAJ_T0005267.1 MGP_CBAJ_G0004457.1 mouse_genomes_project 8 27238968 27239584 - Proscos antisense antisense MGP_CBAJ_T0010832.1 MGP_CBAJ_G0008970.1 mouse_genomes_project 8 22738341 22738466 - Gm44365 miRNA miRNA MGP_CBAJ_T0087630.1 MGP_CBAJ_G0033016.1 mouse_genomes_project 8 8037947 8462589 + MGP_CBAJ_P0087630 Myo16 protein_coding unknown_likely_coding MGP_CBAJ_T0087631.1 MGP_CBAJ_G0033016.1 mouse_genomes_project 8 8064796 8462580 + MGP_CBAJ_P0087631 Myo16 protein_coding protein_coding MGP_CBAJ_T0087540.1 MGP_CBAJ_G0032986.1 mouse_genomes_project 8 689519 710797 - MGP_CBAJ_P0087540 Fcer2a protein_coding protein_coding MGP_CBAJ_T0087553.1 MGP_CBAJ_G0032993.1 mouse_genomes_project 8 1223100 1243421 + protein_coding retained_intron MGP_CBAJ_T0087554.1 MGP_CBAJ_G0032993.1 mouse_genomes_project 8 1223100 1264568 + MGP_CBAJ_P0087554 protein_coding protein_coding MGP_CBAJ_T0087555.1 MGP_CBAJ_G0032993.1 mouse_genomes_project 8 1223100 1250218 + MGP_CBAJ_P0087555 protein_coding protein_coding MGP_CBAJ_T0087556.1 MGP_CBAJ_G0032993.1 mouse_genomes_project 8 1223107 1264743 + MGP_CBAJ_P0087556 protein_coding protein_coding MGP_CBAJ_T0087557.1 MGP_CBAJ_G0032993.1 mouse_genomes_project 8 1223120 1264563 + MGP_CBAJ_P0087557 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087558.1 MGP_CBAJ_G0032993.1 mouse_genomes_project 8 1223134 1258245 + protein_coding retained_intron MGP_CBAJ_T0087559.1 MGP_CBAJ_G0032993.1 mouse_genomes_project 8 1223272 1264563 + MGP_CBAJ_P0087559 protein_coding protein_coding MGP_CBAJ_T0087560.1 MGP_CBAJ_G0032993.1 mouse_genomes_project 8 1243728 1244570 + protein_coding retained_intron MGP_CBAJ_T0087561.1 MGP_CBAJ_G0032993.1 mouse_genomes_project 8 1247808 1259596 + protein_coding processed_transcript MGP_CBAJ_T0087562.1 MGP_CBAJ_G0032993.1 mouse_genomes_project 8 1257316 1262242 + protein_coding retained_intron MGP_CBAJ_T0087563.1 MGP_CBAJ_G0032993.1 mouse_genomes_project 8 1259891 1264559 + protein_coding retained_intron MGP_CBAJ_T0087564.1 MGP_CBAJ_G0032993.1 mouse_genomes_project 8 1260135 1262857 + protein_coding retained_intron MGP_CBAJ_T0087565.1 MGP_CBAJ_G0032993.1 mouse_genomes_project 8 1262245 1263120 + protein_coding retained_intron MGP_CBAJ_T0087566.1 MGP_CBAJ_G0032993.1 mouse_genomes_project 8 1262765 1267774 + MGP_CBAJ_P0087566 protein_coding protein_coding MGP_CBAJ_T0087586.1 MGP_CBAJ_G0032999.1 mouse_genomes_project 8 1321561 1323188 - MGP_CBAJ_P0087586 Ctxn1 protein_coding protein_coding MGP_CBAJ_T0089607.1 MGP_CBAJ_G0033643.1 mouse_genomes_project 8 103608866 103611452 + MGP_CBAJ_P0089607 Tepp protein_coding protein_coding MGP_CBAJ_T0089608.1 MGP_CBAJ_G0033643.1 mouse_genomes_project 8 103608886 103618899 + MGP_CBAJ_P0089608 Tepp protein_coding protein_coding MGP_CBAJ_T0089609.1 MGP_CBAJ_G0033643.1 mouse_genomes_project 8 103609899 103619685 + MGP_CBAJ_P0089609 Tepp protein_coding protein_coding MGP_CBAJ_T0089610.1 MGP_CBAJ_G0033643.1 mouse_genomes_project 8 103609903 103619685 + MGP_CBAJ_P0089610 Tepp protein_coding protein_coding MGP_CBAJ_T0089611.1 MGP_CBAJ_G0033643.1 mouse_genomes_project 8 103618793 103624677 + Tepp protein_coding retained_intron MGP_CBAJ_T0089612.1 MGP_CBAJ_G0033643.1 mouse_genomes_project 8 103618851 103624565 + MGP_CBAJ_P0089612 Tepp protein_coding protein_coding MGP_CBAJ_T0088362.1 MGP_CBAJ_G0033264.1 mouse_genomes_project 8 50388515 50409440 + MGP_CBAJ_P0088362 Rwdd4a protein_coding protein_coding MGP_CBAJ_T0088363.1 MGP_CBAJ_G0033264.1 mouse_genomes_project 8 50388515 50407894 + MGP_CBAJ_P0088363 Rwdd4a protein_coding nonsense_mediated_decay MGP_CBAJ_T0088364.1 MGP_CBAJ_G0033264.1 mouse_genomes_project 8 50388537 50398771 + MGP_CBAJ_P0088364 Rwdd4a protein_coding protein_coding MGP_CBAJ_T0088365.1 MGP_CBAJ_G0033264.1 mouse_genomes_project 8 50402496 50407905 + Rwdd4a protein_coding processed_transcript MGP_CBAJ_T0088366.1 MGP_CBAJ_G0033264.1 mouse_genomes_project 8 50407072 50409570 + Rwdd4a protein_coding retained_intron MGP_CBAJ_T0088733.1 MGP_CBAJ_G0033371.1 mouse_genomes_project 8 75948443 76014832 - Crtc1 protein_coding retained_intron MGP_CBAJ_T0088734.1 MGP_CBAJ_G0033371.1 mouse_genomes_project 8 75948443 76014832 - MGP_CBAJ_P0088734 Crtc1 protein_coding protein_coding MGP_CBAJ_T0088735.1 MGP_CBAJ_G0033371.1 mouse_genomes_project 8 75966154 75971218 - Crtc1 protein_coding retained_intron MGP_CBAJ_T0088736.1 MGP_CBAJ_G0033371.1 mouse_genomes_project 8 75973263 76014828 - Crtc1 protein_coding retained_intron MGP_CBAJ_T0088737.1 MGP_CBAJ_G0033371.1 mouse_genomes_project 8 75974540 76006625 - Crtc1 protein_coding processed_transcript MGP_CBAJ_T0015727.1 MGP_CBAJ_G0013839.1 mouse_genomes_project 8 20206976 20208121 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010844.1 MGP_CBAJ_G0008982.1 mouse_genomes_project 8 69424786 69424896 - Mir710 miRNA miRNA MGP_CBAJ_T0005326.1 MGP_CBAJ_G0004510.1 mouse_genomes_project 8 138932244 138947972 + A730098A19Rik antisense antisense MGP_CBAJ_T0100838.1 MGP_CBAJ_G0039093.1 mouse_genomes_project 8 130003978 130004108 + Gm25200 snoRNA snoRNA MGP_CBAJ_T0098465.1 MGP_CBAJ_G0036726.1 mouse_genomes_project 8 132250784 132253461 + Gm15898 sense_intronic sense_intronic MGP_CBAJ_T0009021.1 MGP_CBAJ_G0007246.1 mouse_genomes_project 8 91436493 91441066 - Gm26887 lincRNA lincRNA MGP_CBAJ_T0089135.1 MGP_CBAJ_G0033504.1 mouse_genomes_project 8 90944286 90962380 - MGP_CBAJ_P0089135 Adgre5 protein_coding protein_coding MGP_CBAJ_T0089136.1 MGP_CBAJ_G0033504.1 mouse_genomes_project 8 90944397 90962223 - MGP_CBAJ_P0089136 Adgre5 protein_coding protein_coding MGP_CBAJ_T0089137.1 MGP_CBAJ_G0033504.1 mouse_genomes_project 8 90944399 90962227 - MGP_CBAJ_P0089137 Adgre5 protein_coding protein_coding MGP_CBAJ_T0089138.1 MGP_CBAJ_G0033504.1 mouse_genomes_project 8 90944853 90945866 - Adgre5 protein_coding retained_intron MGP_CBAJ_T0089139.1 MGP_CBAJ_G0033504.1 mouse_genomes_project 8 90946283 90949357 - Adgre5 protein_coding retained_intron MGP_CBAJ_T0089140.1 MGP_CBAJ_G0033504.1 mouse_genomes_project 8 90948600 90949383 - Adgre5 protein_coding retained_intron MGP_CBAJ_T0089141.1 MGP_CBAJ_G0033504.1 mouse_genomes_project 8 90954593 90962237 - MGP_CBAJ_P0089141 Adgre5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0010836.1 MGP_CBAJ_G0008974.1 mouse_genomes_project 8 26285294 26285375 + Gm44299 miRNA miRNA MGP_CBAJ_T0089118.1 MGP_CBAJ_G0033501.1 mouse_genomes_project 8 90876966 90881402 + Ptger1 protein_coding retained_intron MGP_CBAJ_T0089119.1 MGP_CBAJ_G0033501.1 mouse_genomes_project 8 90876996 90882884 + MGP_CBAJ_P0089119 Ptger1 protein_coding protein_coding MGP_CBAJ_T0088732.1 MGP_CBAJ_G0033370.1 mouse_genomes_project 8 75939555 75948154 + MGP_CBAJ_P0088732 Comp protein_coding protein_coding MGP_CBAJ_T0088650.1 MGP_CBAJ_G0033354.1 mouse_genomes_project 8 75620396 75627494 + MGP_CBAJ_P0088650 Tm6sf2 protein_coding protein_coding MGP_CBAJ_T0088651.1 MGP_CBAJ_G0033354.1 mouse_genomes_project 8 75620404 75627480 + MGP_CBAJ_P0088651 Tm6sf2 protein_coding protein_coding MGP_CBAJ_T0088652.1 MGP_CBAJ_G0033354.1 mouse_genomes_project 8 75621756 75623142 + Tm6sf2 protein_coding retained_intron MGP_CBAJ_T0088653.1 MGP_CBAJ_G0033354.1 mouse_genomes_project 8 75622856 75625557 + Tm6sf2 protein_coding retained_intron MGP_CBAJ_T0088654.1 MGP_CBAJ_G0033354.1 mouse_genomes_project 8 75624834 75626048 + Tm6sf2 protein_coding retained_intron MGP_CBAJ_T0100786.1 MGP_CBAJ_G0039041.1 mouse_genomes_project 8 17204058 17204189 - Gm24469 snoRNA snoRNA MGP_CBAJ_T0089476.1 MGP_CBAJ_G0033600.1 mouse_genomes_project 8 101000581 101042757 + MGP_CBAJ_P0089476 Slc6a2 protein_coding protein_coding MGP_CBAJ_T0089477.1 MGP_CBAJ_G0033600.1 mouse_genomes_project 8 101001550 101045498 + MGP_CBAJ_P0089477 Slc6a2 protein_coding protein_coding MGP_CBAJ_T0088981.1 MGP_CBAJ_G0033450.1 mouse_genomes_project 8 78553247 78558938 - MGP_CBAJ_P0088981 Smim7 protein_coding protein_coding MGP_CBAJ_T0088982.1 MGP_CBAJ_G0033450.1 mouse_genomes_project 8 78555550 78558899 - MGP_CBAJ_P0088982 Smim7 protein_coding protein_coding MGP_CBAJ_T0088983.1 MGP_CBAJ_G0033450.1 mouse_genomes_project 8 78558437 78558912 - Smim7 protein_coding retained_intron MGP_CBAJ_T0088815.1 MGP_CBAJ_G0033398.1 mouse_genomes_project 8 76512459 76514759 + MGP_CBAJ_P0088815 protein_coding protein_coding MGP_CBAJ_T0090277.1 MGP_CBAJ_G0033876.1 mouse_genomes_project 8 134399425 134431880 - MGP_CBAJ_P0090277 Car5a protein_coding protein_coding MGP_CBAJ_T0090278.1 MGP_CBAJ_G0033876.1 mouse_genomes_project 8 134401042 134411092 - Car5a protein_coding processed_transcript MGP_CBAJ_T0099552.1 MGP_CBAJ_G0037807.1 mouse_genomes_project 8 64514618 64514722 + Gm26164 snRNA snRNA MGP_CBAJ_T0087486.1 MGP_CBAJ_G0032972.1 mouse_genomes_project 8 406146 420375 - MGP_CBAJ_P0087486 Pex11g protein_coding protein_coding MGP_CBAJ_T0087487.1 MGP_CBAJ_G0032972.1 mouse_genomes_project 8 406149 420340 - MGP_CBAJ_P0087487 Pex11g protein_coding protein_coding MGP_CBAJ_T0087488.1 MGP_CBAJ_G0032972.1 mouse_genomes_project 8 415918 420365 - MGP_CBAJ_P0087488 Pex11g protein_coding protein_coding MGP_CBAJ_T0097853.1 MGP_CBAJ_G0036126.1 mouse_genomes_project 8 135137453 135137839 + pseudogene pseudogene MGP_CBAJ_T0010837.1 MGP_CBAJ_G0008975.1 mouse_genomes_project 8 35224239 35224330 - Mir6395 miRNA miRNA MGP_CBAJ_T0009044.1 MGP_CBAJ_G0007262.1 mouse_genomes_project 8 95595325 95678372 - lincRNA lincRNA MGP_CBAJ_T0018207.1 MGP_CBAJ_G0015457.1 mouse_genomes_project 8 61315780 61332087 - AV026068 processed_transcript retained_intron MGP_CBAJ_T0018208.1 MGP_CBAJ_G0015457.1 mouse_genomes_project 8 61315780 61332429 - AV026068 processed_transcript lincRNA MGP_CBAJ_T0018209.1 MGP_CBAJ_G0015457.1 mouse_genomes_project 8 61315780 61332552 - AV026068 processed_transcript lincRNA MGP_CBAJ_T0018210.1 MGP_CBAJ_G0015457.1 mouse_genomes_project 8 61315780 61332011 - AV026068 processed_transcript lincRNA MGP_CBAJ_T0018211.1 MGP_CBAJ_G0015457.1 mouse_genomes_project 8 61315786 61316872 - AV026068 processed_transcript lincRNA MGP_CBAJ_T0018212.1 MGP_CBAJ_G0015457.1 mouse_genomes_project 8 61316756 61332523 - AV026068 processed_transcript retained_intron MGP_CBAJ_T0018213.1 MGP_CBAJ_G0015457.1 mouse_genomes_project 8 61318530 61332461 - AV026068 processed_transcript retained_intron MGP_CBAJ_T0018214.1 MGP_CBAJ_G0015457.1 mouse_genomes_project 8 61325977 61332442 - AV026068 processed_transcript retained_intron MGP_CBAJ_T0008964.1 MGP_CBAJ_G0007200.1 mouse_genomes_project 8 8804140 8808171 - 3930402G23Rik lincRNA lincRNA MGP_CBAJ_T0088143.1 MGP_CBAJ_G0033198.1 mouse_genomes_project 8 35179833 35191338 - MGP_CBAJ_P0088143 Leprotl1 protein_coding protein_coding MGP_CBAJ_T0088183.1 MGP_CBAJ_G0033218.1 mouse_genomes_project 8 42411994 42474042 + MGP_CBAJ_P0088183 Zdhhc2 protein_coding protein_coding MGP_CBAJ_T0088184.1 MGP_CBAJ_G0033218.1 mouse_genomes_project 8 42412000 42498431 + MGP_CBAJ_P0088184 Zdhhc2 protein_coding protein_coding MGP_CBAJ_T0088185.1 MGP_CBAJ_G0033218.1 mouse_genomes_project 8 42412001 42458755 + Zdhhc2 protein_coding retained_intron MGP_CBAJ_T0088186.1 MGP_CBAJ_G0033218.1 mouse_genomes_project 8 42412019 42472581 + MGP_CBAJ_P0088186 Zdhhc2 protein_coding protein_coding MGP_CBAJ_T0088187.1 MGP_CBAJ_G0033218.1 mouse_genomes_project 8 42412283 42447168 + Zdhhc2 protein_coding processed_transcript MGP_CBAJ_T0088195.1 MGP_CBAJ_G0033218.1 mouse_genomes_project 8 42488729 42498433 + Zdhhc2 protein_coding processed_transcript MGP_CBAJ_T0008996.1 MGP_CBAJ_G0007224.1 mouse_genomes_project 8 43987009 44231775 + 2810404M03Rik lincRNA lincRNA MGP_CBAJ_T0009090.1 MGP_CBAJ_G0007293.1 mouse_genomes_project 8 133814419 133820467 + Gm26747 lincRNA lincRNA MGP_CBAJ_T0088173.1 MGP_CBAJ_G0033213.1 mouse_genomes_project 8 39112399 40433985 - MGP_CBAJ_P0088173 Sgcz protein_coding nonsense_mediated_decay MGP_CBAJ_T0088174.1 MGP_CBAJ_G0033213.1 mouse_genomes_project 8 39112655 40433985 - MGP_CBAJ_P0088174 Sgcz protein_coding protein_coding MGP_CBAJ_T0087892.1 MGP_CBAJ_G0033116.1 mouse_genomes_project 8 21967582 21987534 + MGP_CBAJ_P0087892 Mrps31 protein_coding protein_coding MGP_CBAJ_T0089812.1 MGP_CBAJ_G0033728.1 mouse_genomes_project 8 115841905 115845737 - MGP_CBAJ_P0089812 Lcat protein_coding protein_coding MGP_CBAJ_T0089770.1 MGP_CBAJ_G0033706.1 mouse_genomes_project 8 115318627 115330483 - MGP_CBAJ_P0089770 Zdhhc1 protein_coding protein_coding MGP_CBAJ_T0010846.1 MGP_CBAJ_G0008984.1 mouse_genomes_project 8 72915336 72915429 - Gm44391 miRNA miRNA MGP_CBAJ_T0100802.1 MGP_CBAJ_G0039057.1 mouse_genomes_project 8 50306332 50306466 + Gm22857 snoRNA snoRNA MGP_CBAJ_T0087854.1 MGP_CBAJ_G0033091.1 mouse_genomes_project 8 20724398 20727113 - MGP_CBAJ_P0087854 protein_coding protein_coding MGP_CBAJ_T0010875.1 MGP_CBAJ_G0009013.1 mouse_genomes_project 8 104115614 104115678 - Mir7073 miRNA miRNA MGP_CBAJ_T0009011.1 MGP_CBAJ_G0007238.1 mouse_genomes_project 8 78052374 78055810 - Gm26586 lincRNA lincRNA MGP_CBAJ_T0090326.1 MGP_CBAJ_G0033887.1 mouse_genomes_project 8 135016849 135095527 - MGP_CBAJ_P0090326 Piezo1 protein_coding protein_coding MGP_CBAJ_T0090327.1 MGP_CBAJ_G0033887.1 mouse_genomes_project 8 135016863 135038395 - MGP_CBAJ_P0090327 Piezo1 protein_coding protein_coding MGP_CBAJ_T0090328.1 MGP_CBAJ_G0033887.1 mouse_genomes_project 8 135016872 135019932 - Piezo1 protein_coding retained_intron MGP_CBAJ_T0090329.1 MGP_CBAJ_G0033887.1 mouse_genomes_project 8 135017133 135038394 - MGP_CBAJ_P0090329 Piezo1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090330.1 MGP_CBAJ_G0033887.1 mouse_genomes_project 8 135017133 135095236 - MGP_CBAJ_P0090330 Piezo1 protein_coding unknown_likely_coding MGP_CBAJ_T0090331.1 MGP_CBAJ_G0033887.1 mouse_genomes_project 8 135017192 135018152 - Piezo1 protein_coding retained_intron MGP_CBAJ_T0090332.1 MGP_CBAJ_G0033887.1 mouse_genomes_project 8 135017231 135017828 - Piezo1 protein_coding retained_intron MGP_CBAJ_T0090333.1 MGP_CBAJ_G0033887.1 mouse_genomes_project 8 135018518 135019021 - Piezo1 protein_coding retained_intron MGP_CBAJ_T0090334.1 MGP_CBAJ_G0033887.1 mouse_genomes_project 8 135020016 135020776 - Piezo1 protein_coding retained_intron MGP_CBAJ_T0090335.1 MGP_CBAJ_G0033887.1 mouse_genomes_project 8 135021075 135036713 - MGP_CBAJ_P0090335 Piezo1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089972.1 MGP_CBAJ_G0033787.1 mouse_genomes_project 8 121519427 121526140 + MGP_CBAJ_P0089972 Cog4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089973.1 MGP_CBAJ_G0033787.1 mouse_genomes_project 8 121519437 121524757 + MGP_CBAJ_P0089973 Cog4 protein_coding protein_coding MGP_CBAJ_T0089974.1 MGP_CBAJ_G0033787.1 mouse_genomes_project 8 121519442 121522685 + Cog4 protein_coding retained_intron MGP_CBAJ_T0089975.1 MGP_CBAJ_G0033787.1 mouse_genomes_project 8 121519454 121526204 + Cog4 protein_coding processed_transcript MGP_CBAJ_T0089976.1 MGP_CBAJ_G0033787.1 mouse_genomes_project 8 121519454 121560923 + MGP_CBAJ_P0089976 Cog4 protein_coding protein_coding MGP_CBAJ_T0089977.1 MGP_CBAJ_G0033787.1 mouse_genomes_project 8 121519454 121526241 + MGP_CBAJ_P0089977 Cog4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089978.1 MGP_CBAJ_G0033787.1 mouse_genomes_project 8 121519454 121526195 + MGP_CBAJ_P0089978 Cog4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089979.1 MGP_CBAJ_G0033787.1 mouse_genomes_project 8 121519457 121560556 + MGP_CBAJ_P0089979 Cog4 protein_coding protein_coding MGP_CBAJ_T0089980.1 MGP_CBAJ_G0033787.1 mouse_genomes_project 8 121522282 121560912 + MGP_CBAJ_P0089980 Cog4 protein_coding protein_coding MGP_CBAJ_T0089981.1 MGP_CBAJ_G0033787.1 mouse_genomes_project 8 121532090 121540787 + Cog4 protein_coding retained_intron MGP_CBAJ_T0089982.1 MGP_CBAJ_G0033787.1 mouse_genomes_project 8 121532245 121560556 + MGP_CBAJ_P0089982 Cog4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0089983.1 MGP_CBAJ_G0033787.1 mouse_genomes_project 8 121535478 121539033 + Cog4 protein_coding retained_intron MGP_CBAJ_T0005241.1 MGP_CBAJ_G0004439.1 mouse_genomes_project 8 175085 176023 + Gm16180 antisense antisense MGP_CBAJ_T0088093.1 MGP_CBAJ_G0033181.1 mouse_genomes_project 8 31862021 31875634 - MGP_CBAJ_P0088093 Mak16 protein_coding protein_coding MGP_CBAJ_T0087849.1 MGP_CBAJ_G0033087.1 mouse_genomes_project 8 18382232 18382445 - MGP_CBAJ_P0087849 Defb8 protein_coding protein_coding MGP_CBAJ_T0088509.1 MGP_CBAJ_G0033307.1 mouse_genomes_project 8 68867282 69096206 - MGP_CBAJ_P0088509 Tll1 protein_coding protein_coding MGP_CBAJ_T0087597.1 MGP_CBAJ_G0033002.1 mouse_genomes_project 8 1390477 1434652 + MGP_CBAJ_P0087597 Ccl25 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087598.1 MGP_CBAJ_G0033002.1 mouse_genomes_project 8 1390494 1420522 + MGP_CBAJ_P0087598 Ccl25 protein_coding non_stop_decay MGP_CBAJ_T0087599.1 MGP_CBAJ_G0033002.1 mouse_genomes_project 8 1390497 1420522 + MGP_CBAJ_P0087599 Ccl25 protein_coding nonsense_mediated_decay MGP_CBAJ_T0087600.1 MGP_CBAJ_G0033002.1 mouse_genomes_project 8 1390500 1434308 + MGP_CBAJ_P0087600 Ccl25 protein_coding protein_coding MGP_CBAJ_T0087601.1 MGP_CBAJ_G0033002.1 mouse_genomes_project 8 1390503 1425831 + MGP_CBAJ_P0087601 Ccl25 protein_coding protein_coding MGP_CBAJ_T0087602.1 MGP_CBAJ_G0033002.1 mouse_genomes_project 8 1390508 1398555 + Ccl25 protein_coding processed_transcript MGP_CBAJ_T0087603.1 MGP_CBAJ_G0033002.1 mouse_genomes_project 8 1421321 1434674 + MGP_CBAJ_P0087603 Ccl25 protein_coding protein_coding MGP_CBAJ_T0087604.1 MGP_CBAJ_G0033002.1 mouse_genomes_project 8 1421321 1432641 + MGP_CBAJ_P0087604 Ccl25 protein_coding protein_coding MGP_CBAJ_T0090527.1 MGP_CBAJ_G0033947.1 mouse_genomes_project 8 138950275 138989437 + MGP_CBAJ_P0090527 BC021891 protein_coding protein_coding MGP_CBAJ_T0087947.1 MGP_CBAJ_G0033133.1 mouse_genomes_project 8 23954553 23968319 + MGP_CBAJ_P0087947 protein_coding protein_coding MGP_CBAJ_T0088637.1 MGP_CBAJ_G0033348.1 mouse_genomes_project 8 75422827 75428997 - MGP_CBAJ_P0088637 Yjefn3 protein_coding unknown_likely_coding MGP_CBAJ_T0088638.1 MGP_CBAJ_G0033348.1 mouse_genomes_project 8 75422834 75437509 - MGP_CBAJ_P0088638 Yjefn3 protein_coding protein_coding MGP_CBAJ_T0088639.1 MGP_CBAJ_G0033348.1 mouse_genomes_project 8 75422834 75426003 - MGP_CBAJ_P0088639 Yjefn3 protein_coding protein_coding MGP_CBAJ_T0088640.1 MGP_CBAJ_G0033348.1 mouse_genomes_project 8 75422836 75423222 - Yjefn3 protein_coding processed_transcript MGP_CBAJ_T0088889.1 MGP_CBAJ_G0033419.1 mouse_genomes_project 8 77339477 77344362 + MGP_CBAJ_P0088889 Mvb12a protein_coding protein_coding MGP_CBAJ_T0089918.1 MGP_CBAJ_G0033764.1 mouse_genomes_project 8 120009014 120026585 - MGP_CBAJ_P0089918 Dhx38 protein_coding protein_coding MGP_CBAJ_T0087711.1 MGP_CBAJ_G0033036.1 mouse_genomes_project 8 11167697 11188921 + MGP_CBAJ_P0087711 F10 protein_coding protein_coding MGP_CBAJ_T0087712.1 MGP_CBAJ_G0033036.1 mouse_genomes_project 8 11167962 11179169 + MGP_CBAJ_P0087712 F10 protein_coding protein_coding MGP_CBAJ_T0087713.1 MGP_CBAJ_G0033036.1 mouse_genomes_project 8 11168213 11188903 + MGP_CBAJ_P0087713 F10 protein_coding protein_coding MGP_CBAJ_T0090077.1 MGP_CBAJ_G0033817.1 mouse_genomes_project 8 125451459 125483915 + Vat1l protein_coding processed_transcript MGP_CBAJ_T0090078.1 MGP_CBAJ_G0033817.1 mouse_genomes_project 8 125451477 125656878 + MGP_CBAJ_P0090078 Vat1l protein_coding protein_coding MGP_CBAJ_T0090079.1 MGP_CBAJ_G0033817.1 mouse_genomes_project 8 125451481 125483909 + MGP_CBAJ_P0090079 Vat1l protein_coding protein_coding MGP_CBAJ_T0090080.1 MGP_CBAJ_G0033817.1 mouse_genomes_project 8 125650922 125656877 + Vat1l protein_coding retained_intron MGP_CBAJ_T0088070.1 MGP_CBAJ_G0033167.1 mouse_genomes_project 8 27328380 27333181 - MGP_CBAJ_P0088070 Brf2 protein_coding protein_coding MGP_CBAJ_T0090456.1 MGP_CBAJ_G0033925.1 mouse_genomes_project 8 136785338 136817324 + MGP_CBAJ_P0090456 Urb2 protein_coding unknown_likely_coding MGP_CBAJ_T0090457.1 MGP_CBAJ_G0033925.1 mouse_genomes_project 8 136785367 136818522 + MGP_CBAJ_P0090457 Urb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0005242.1 MGP_CBAJ_G0004440.1 mouse_genomes_project 8 678969 680118 - antisense antisense MGP_CBAJ_T0100799.1 MGP_CBAJ_G0039054.1 mouse_genomes_project 8 45713945 45714075 + Gm22986 snoRNA snoRNA MGP_CBAJ_T0088342.1 MGP_CBAJ_G0033257.1 mouse_genomes_project 8 49302473 49345444 - MGP_CBAJ_P0088342 Primpol protein_coding protein_coding MGP_CBAJ_T0088343.1 MGP_CBAJ_G0033257.1 mouse_genomes_project 8 49303056 49345444 - Primpol protein_coding retained_intron MGP_CBAJ_T0088344.1 MGP_CBAJ_G0033257.1 mouse_genomes_project 8 49313502 49320909 - Primpol protein_coding processed_transcript MGP_CBAJ_T0088345.1 MGP_CBAJ_G0033257.1 mouse_genomes_project 8 49333395 49341259 - MGP_CBAJ_P0088345 Primpol protein_coding protein_coding MGP_CBAJ_T0088346.1 MGP_CBAJ_G0033257.1 mouse_genomes_project 8 49339021 49345456 - Primpol protein_coding retained_intron MGP_CBAJ_T0099570.1 MGP_CBAJ_G0037825.1 mouse_genomes_project 8 114216926 114217033 + Gm22148 snRNA snRNA MGP_CBAJ_T0005294.1 MGP_CBAJ_G0004481.1 mouse_genomes_project 8 99525342 99533597 - Gm3235 antisense antisense MGP_CBAJ_T0090102.1 MGP_CBAJ_G0033825.1 mouse_genomes_project 8 128621736 128638751 + MGP_CBAJ_P0090102 Atmin protein_coding protein_coding MGP_CBAJ_T0093005.1 MGP_CBAJ_G0034752.1 mouse_genomes_project 9 92957448 93070322 - MGP_CBAJ_P0093005 Me1 protein_coding protein_coding MGP_CBAJ_T0093006.1 MGP_CBAJ_G0034752.1 mouse_genomes_project 9 92957483 93061671 - MGP_CBAJ_P0093006 Me1 protein_coding protein_coding MGP_CBAJ_T0093007.1 MGP_CBAJ_G0034752.1 mouse_genomes_project 9 92958808 92994556 - Me1 protein_coding processed_transcript MGP_CBAJ_T0093008.1 MGP_CBAJ_G0034752.1 mouse_genomes_project 9 92989392 92994589 - Me1 protein_coding processed_transcript MGP_CBAJ_T0015800.1 MGP_CBAJ_G0013912.1 mouse_genomes_project 9 33897510 33897742 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0090918.1 MGP_CBAJ_G0034103.1 mouse_genomes_project 9 19967195 19984118 - MGP_CBAJ_P0090918 Ap1m2 protein_coding protein_coding MGP_CBAJ_T0090919.1 MGP_CBAJ_G0034103.1 mouse_genomes_project 9 19967195 19984118 - MGP_CBAJ_P0090919 Ap1m2 protein_coding protein_coding MGP_CBAJ_T0002391.1 MGP_CBAJ_G0002303.1 mouse_genomes_project 9 108734209 108735184 + TEC TEC MGP_CBAJ_T0009201.1 MGP_CBAJ_G0007382.1 mouse_genomes_project 9 101914766 101916377 - Gm29395 lincRNA lincRNA MGP_CBAJ_T0091142.1 MGP_CBAJ_G0034182.1 mouse_genomes_project 9 34497753 34501027 + MGP_CBAJ_P0091142 Kirrel3 protein_coding protein_coding MGP_CBAJ_T0091143.1 MGP_CBAJ_G0034182.1 mouse_genomes_project 9 34497984 34522372 + Kirrel3 protein_coding processed_transcript MGP_CBAJ_T0091144.1 MGP_CBAJ_G0034182.1 mouse_genomes_project 9 34497985 35103485 + MGP_CBAJ_P0091144 Kirrel3 protein_coding protein_coding MGP_CBAJ_T0091145.1 MGP_CBAJ_G0034182.1 mouse_genomes_project 9 34500601 35104921 + MGP_CBAJ_P0091145 Kirrel3 protein_coding protein_coding MGP_CBAJ_T0091146.1 MGP_CBAJ_G0034182.1 mouse_genomes_project 9 34500663 35099120 + MGP_CBAJ_P0091146 Kirrel3 protein_coding protein_coding MGP_CBAJ_T0091147.1 MGP_CBAJ_G0034182.1 mouse_genomes_project 9 34500663 35104921 + MGP_CBAJ_P0091147 Kirrel3 protein_coding protein_coding MGP_CBAJ_T0091148.1 MGP_CBAJ_G0034182.1 mouse_genomes_project 9 34500696 35104515 + MGP_CBAJ_P0091148 Kirrel3 protein_coding protein_coding MGP_CBAJ_T0091149.1 MGP_CBAJ_G0034182.1 mouse_genomes_project 9 34500804 35104515 + MGP_CBAJ_P0091149 Kirrel3 protein_coding protein_coding MGP_CBAJ_T0091150.1 MGP_CBAJ_G0034182.1 mouse_genomes_project 9 35082147 35099118 + MGP_CBAJ_P0091150 Kirrel3 protein_coding protein_coding MGP_CBAJ_T0094529.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121796320 121926618 - MGP_CBAJ_P0094529 Arpp21 protein_coding protein_coding MGP_CBAJ_T0094530.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121796320 121928651 - MGP_CBAJ_P0094530 Arpp21 protein_coding protein_coding MGP_CBAJ_T0094531.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121796320 121928651 - MGP_CBAJ_P0094531 Arpp21 protein_coding protein_coding MGP_CBAJ_T0094532.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121796320 121926848 - MGP_CBAJ_P0094532 Arpp21 protein_coding protein_coding MGP_CBAJ_T0094533.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121796463 121926661 - MGP_CBAJ_P0094533 Arpp21 protein_coding protein_coding MGP_CBAJ_T0094534.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121796465 121973869 - Arpp21 protein_coding retained_intron MGP_CBAJ_T0094535.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121796487 121974462 - MGP_CBAJ_P0094535 Arpp21 protein_coding protein_coding MGP_CBAJ_T0094536.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121796489 121971952 - MGP_CBAJ_P0094536 Arpp21 protein_coding protein_coding MGP_CBAJ_T0094537.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121796966 121928532 - MGP_CBAJ_P0094537 Arpp21 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094538.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121853717 121956838 - MGP_CBAJ_P0094538 Arpp21 protein_coding protein_coding MGP_CBAJ_T0094539.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121891383 121974287 - Arpp21 protein_coding retained_intron MGP_CBAJ_T0094540.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121892396 121974462 - MGP_CBAJ_P0094540 Arpp21 protein_coding protein_coding MGP_CBAJ_T0094541.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121899637 121956928 - MGP_CBAJ_P0094541 Arpp21 protein_coding protein_coding MGP_CBAJ_T0094542.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121916530 121973072 - Arpp21 protein_coding retained_intron MGP_CBAJ_T0094543.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121920007 121956903 - MGP_CBAJ_P0094543 Arpp21 protein_coding protein_coding MGP_CBAJ_T0094544.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121920053 121956903 - MGP_CBAJ_P0094544 Arpp21 protein_coding protein_coding MGP_CBAJ_T0094545.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121920091 121973261 - MGP_CBAJ_P0094545 Arpp21 protein_coding protein_coding MGP_CBAJ_T0094546.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121920973 121928811 - MGP_CBAJ_P0094546 Arpp21 protein_coding protein_coding MGP_CBAJ_T0094547.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121920973 121928814 - MGP_CBAJ_P0094547 Arpp21 protein_coding protein_coding MGP_CBAJ_T0094548.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121921913 121928789 - Arpp21 protein_coding retained_intron MGP_CBAJ_T0094549.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121921919 121928834 - Arpp21 protein_coding processed_transcript MGP_CBAJ_T0094550.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121921948 121928811 - Arpp21 protein_coding processed_transcript MGP_CBAJ_T0094551.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121923593 121928765 - Arpp21 protein_coding retained_intron MGP_CBAJ_T0094552.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121923623 121926992 - Arpp21 protein_coding processed_transcript MGP_CBAJ_T0094553.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121923666 121926848 - Arpp21 protein_coding processed_transcript MGP_CBAJ_T0094554.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121923920 121926835 - Arpp21 protein_coding retained_intron MGP_CBAJ_T0094555.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121926626 121971353 - Arpp21 protein_coding processed_transcript MGP_CBAJ_T0094556.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121928476 121973318 - Arpp21 protein_coding processed_transcript MGP_CBAJ_T0094557.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121928513 121975392 - Arpp21 protein_coding processed_transcript MGP_CBAJ_T0094558.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121928546 121929325 - Arpp21 protein_coding processed_transcript MGP_CBAJ_T0094559.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121928814 121929359 - Arpp21 protein_coding processed_transcript MGP_CBAJ_T0094560.1 MGP_CBAJ_G0035027.1 mouse_genomes_project 9 121944744 121956881 - Arpp21 protein_coding retained_intron MGP_CBAJ_T0091479.1 MGP_CBAJ_G0034345.1 mouse_genomes_project 9 45374537 45405983 + MGP_CBAJ_P0091479 Usp2 protein_coding protein_coding MGP_CBAJ_T0091480.1 MGP_CBAJ_G0034345.1 mouse_genomes_project 9 45374594 45404309 + MGP_CBAJ_P0091480 Usp2 protein_coding protein_coding MGP_CBAJ_T0091481.1 MGP_CBAJ_G0034345.1 mouse_genomes_project 9 45376958 45404361 + MGP_CBAJ_P0091481 Usp2 protein_coding protein_coding MGP_CBAJ_T0091482.1 MGP_CBAJ_G0034345.1 mouse_genomes_project 9 45379695 45383420 + MGP_CBAJ_P0091482 Usp2 protein_coding protein_coding MGP_CBAJ_T0091483.1 MGP_CBAJ_G0034345.1 mouse_genomes_project 9 45395324 45404306 + MGP_CBAJ_P0091483 Usp2 protein_coding protein_coding MGP_CBAJ_T0091484.1 MGP_CBAJ_G0034345.1 mouse_genomes_project 9 45395325 45404845 + MGP_CBAJ_P0091484 Usp2 protein_coding protein_coding MGP_CBAJ_T0091485.1 MGP_CBAJ_G0034345.1 mouse_genomes_project 9 45397566 45402876 + MGP_CBAJ_P0091485 Usp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091486.1 MGP_CBAJ_G0034345.1 mouse_genomes_project 9 45402843 45404732 + Usp2 protein_coding processed_transcript MGP_CBAJ_T0091487.1 MGP_CBAJ_G0034345.1 mouse_genomes_project 9 45403049 45404313 + Usp2 protein_coding processed_transcript MGP_CBAJ_T0091341.1 MGP_CBAJ_G0034266.1 mouse_genomes_project 9 39266741 39270452 - MGP_CBAJ_P0091341 Olfr919 protein_coding protein_coding MGP_CBAJ_T0090890.1 MGP_CBAJ_G0034092.1 mouse_genomes_project 9 19687468 19692166 - MGP_CBAJ_P0090890 Zglp1 protein_coding protein_coding MGP_CBAJ_T0099644.1 MGP_CBAJ_G0037899.1 mouse_genomes_project 9 120696705 120696768 + Gm26409 snRNA snRNA MGP_CBAJ_T0090841.1 MGP_CBAJ_G0034075.1 mouse_genomes_project 9 19157131 19171035 + MGP_CBAJ_P0090841 Zfp846 protein_coding protein_coding MGP_CBAJ_T0090842.1 MGP_CBAJ_G0034075.1 mouse_genomes_project 9 19157331 19171037 + MGP_CBAJ_P0090842 Zfp846 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090843.1 MGP_CBAJ_G0034075.1 mouse_genomes_project 9 19163733 19170314 + MGP_CBAJ_P0090843 Zfp846 protein_coding protein_coding MGP_CBAJ_T0092543.1 MGP_CBAJ_G0034651.1 mouse_genomes_project 9 74447475 74454053 - MGP_CBAJ_P0092543 Gcnt3 protein_coding protein_coding MGP_CBAJ_T0009248.1 MGP_CBAJ_G0007421.1 mouse_genomes_project 9 133750183 133857191 + 9530059O14Rik lincRNA lincRNA MGP_CBAJ_T0009249.1 MGP_CBAJ_G0007421.1 mouse_genomes_project 9 133750187 133760848 + 9530059O14Rik lincRNA lincRNA MGP_CBAJ_T0009250.1 MGP_CBAJ_G0007421.1 mouse_genomes_project 9 133750188 133857822 + 9530059O14Rik lincRNA lincRNA MGP_CBAJ_T0100867.1 MGP_CBAJ_G0039122.1 mouse_genomes_project 9 40223527 40223654 - Gm24278 snoRNA snoRNA MGP_CBAJ_T0091624.1 MGP_CBAJ_G0034386.1 mouse_genomes_project 9 46590889 46603076 + MGP_CBAJ_P0091624 Scn2b protein_coding protein_coding MGP_CBAJ_T0091625.1 MGP_CBAJ_G0034386.1 mouse_genomes_project 9 46590894 46603074 + MGP_CBAJ_P0091625 Scn2b protein_coding protein_coding MGP_CBAJ_T0092345.1 MGP_CBAJ_G0034600.1 mouse_genomes_project 9 68728859 68757454 + MGP_CBAJ_P0092345 Vwa9 protein_coding protein_coding MGP_CBAJ_T0092346.1 MGP_CBAJ_G0034600.1 mouse_genomes_project 9 68728964 68757454 + MGP_CBAJ_P0092346 Vwa9 protein_coding protein_coding MGP_CBAJ_T0094903.1 MGP_CBAJ_G0035147.1 mouse_genomes_project 9 135956520 135957435 - MGP_CBAJ_P0094903 protein_coding protein_coding MGP_CBAJ_T0009233.1 MGP_CBAJ_G0007409.1 mouse_genomes_project 9 120195318 120196095 + Gm42470 lincRNA lincRNA MGP_CBAJ_T0093187.1 MGP_CBAJ_G0034792.1 mouse_genomes_project 9 103365280 103475043 + MGP_CBAJ_P0093187 Xrn1 protein_coding protein_coding MGP_CBAJ_T0093188.1 MGP_CBAJ_G0034792.1 mouse_genomes_project 9 103365287 103479819 + MGP_CBAJ_P0093188 Xrn1 protein_coding protein_coding MGP_CBAJ_T0093189.1 MGP_CBAJ_G0034792.1 mouse_genomes_project 9 103365313 103378289 + MGP_CBAJ_P0093189 Xrn1 protein_coding protein_coding MGP_CBAJ_T0093190.1 MGP_CBAJ_G0034792.1 mouse_genomes_project 9 103365352 103418315 + Xrn1 protein_coding retained_intron MGP_CBAJ_T0093191.1 MGP_CBAJ_G0034792.1 mouse_genomes_project 9 103365379 103475043 + Xrn1 protein_coding retained_intron MGP_CBAJ_T0093192.1 MGP_CBAJ_G0034792.1 mouse_genomes_project 9 103365382 103429766 + MGP_CBAJ_P0093192 Xrn1 protein_coding protein_coding MGP_CBAJ_T0093193.1 MGP_CBAJ_G0034792.1 mouse_genomes_project 9 103384997 103388612 + Xrn1 protein_coding retained_intron MGP_CBAJ_T0093194.1 MGP_CBAJ_G0034792.1 mouse_genomes_project 9 103386769 103393299 + Xrn1 protein_coding retained_intron MGP_CBAJ_T0093195.1 MGP_CBAJ_G0034792.1 mouse_genomes_project 9 103435356 103438402 + Xrn1 protein_coding retained_intron MGP_CBAJ_T0094215.1 MGP_CBAJ_G0034969.1 mouse_genomes_project 9 117945256 117976551 + MGP_CBAJ_P0094215 Col7a1 protein_coding protein_coding MGP_CBAJ_T0094216.1 MGP_CBAJ_G0034969.1 mouse_genomes_project 9 117945415 117976190 + MGP_CBAJ_P0094216 Col7a1 protein_coding unknown_likely_coding MGP_CBAJ_T0094217.1 MGP_CBAJ_G0034969.1 mouse_genomes_project 9 117945415 117976551 + MGP_CBAJ_P0094217 Col7a1 protein_coding protein_coding MGP_CBAJ_T0094218.1 MGP_CBAJ_G0034969.1 mouse_genomes_project 9 117946157 117947074 + Col7a1 protein_coding retained_intron MGP_CBAJ_T0094219.1 MGP_CBAJ_G0034969.1 mouse_genomes_project 9 117959329 117960008 + Col7a1 protein_coding retained_intron MGP_CBAJ_T0094220.1 MGP_CBAJ_G0034969.1 mouse_genomes_project 9 117961361 117971905 + Col7a1 protein_coding retained_intron MGP_CBAJ_T0094221.1 MGP_CBAJ_G0034969.1 mouse_genomes_project 9 117967001 117968855 + Col7a1 protein_coding retained_intron MGP_CBAJ_T0094222.1 MGP_CBAJ_G0034969.1 mouse_genomes_project 9 117974331 117976181 + Col7a1 protein_coding retained_intron MGP_CBAJ_T0094223.1 MGP_CBAJ_G0034969.1 mouse_genomes_project 9 117974564 117975594 + Col7a1 protein_coding retained_intron MGP_CBAJ_T0093320.1 MGP_CBAJ_G0034823.1 mouse_genomes_project 9 107407199 107415893 + MGP_CBAJ_P0093320 Dbr1 protein_coding protein_coding MGP_CBAJ_T0093321.1 MGP_CBAJ_G0034823.1 mouse_genomes_project 9 107407228 107413842 + MGP_CBAJ_P0093321 Dbr1 protein_coding protein_coding MGP_CBAJ_T0093322.1 MGP_CBAJ_G0034823.1 mouse_genomes_project 9 107407480 107413450 + MGP_CBAJ_P0093322 Dbr1 protein_coding protein_coding MGP_CBAJ_T0093323.1 MGP_CBAJ_G0034823.1 mouse_genomes_project 9 107407508 107413459 + MGP_CBAJ_P0093323 Dbr1 protein_coding protein_coding MGP_CBAJ_T0093324.1 MGP_CBAJ_G0034823.1 mouse_genomes_project 9 107411602 107415230 + MGP_CBAJ_P0093324 Dbr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093325.1 MGP_CBAJ_G0034823.1 mouse_genomes_project 9 107411697 107414090 + MGP_CBAJ_P0093325 Dbr1 protein_coding protein_coding MGP_CBAJ_T0092160.1 MGP_CBAJ_G0034556.1 mouse_genomes_project 9 62703633 62743032 + MGP_CBAJ_P0092160 Celf6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092161.1 MGP_CBAJ_G0034556.1 mouse_genomes_project 9 62703898 62743032 + MGP_CBAJ_P0092161 Celf6 protein_coding protein_coding MGP_CBAJ_T0092162.1 MGP_CBAJ_G0034556.1 mouse_genomes_project 9 62703898 62743032 + MGP_CBAJ_P0092162 Celf6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092163.1 MGP_CBAJ_G0034556.1 mouse_genomes_project 9 62704084 62744907 + MGP_CBAJ_P0092163 Celf6 protein_coding protein_coding MGP_CBAJ_T0092164.1 MGP_CBAJ_G0034556.1 mouse_genomes_project 9 62736231 62736985 + Celf6 protein_coding retained_intron MGP_CBAJ_T0092165.1 MGP_CBAJ_G0034556.1 mouse_genomes_project 9 62737606 62741867 + Celf6 protein_coding retained_intron MGP_CBAJ_T0002380.1 MGP_CBAJ_G0002292.1 mouse_genomes_project 9 103446183 103448410 + TEC TEC MGP_CBAJ_T0094398.1 MGP_CBAJ_G0035000.1 mouse_genomes_project 9 119996919 120012970 + MGP_CBAJ_P0094398 Kif9 protein_coding protein_coding MGP_CBAJ_T0094399.1 MGP_CBAJ_G0035000.1 mouse_genomes_project 9 119996955 120050851 + MGP_CBAJ_P0094399 Kif9 protein_coding protein_coding MGP_CBAJ_T0094400.1 MGP_CBAJ_G0035000.1 mouse_genomes_project 9 119996955 120050710 + MGP_CBAJ_P0094400 Kif9 protein_coding protein_coding MGP_CBAJ_T0094401.1 MGP_CBAJ_G0035000.1 mouse_genomes_project 9 119996955 120047797 + MGP_CBAJ_P0094401 Kif9 protein_coding protein_coding MGP_CBAJ_T0094402.1 MGP_CBAJ_G0035000.1 mouse_genomes_project 9 119998162 120049508 + MGP_CBAJ_P0094402 Kif9 protein_coding protein_coding MGP_CBAJ_T0009109.1 MGP_CBAJ_G0007309.1 mouse_genomes_project 9 20907001 20927547 + Gm16845 lincRNA lincRNA MGP_CBAJ_T0009150.1 MGP_CBAJ_G0007344.1 mouse_genomes_project 9 64635563 64636960 - Gm10655 lincRNA lincRNA MGP_CBAJ_T0009151.1 MGP_CBAJ_G0007344.1 mouse_genomes_project 9 64635644 64636394 - Gm10655 lincRNA lincRNA MGP_CBAJ_T0005350.1 MGP_CBAJ_G0004528.1 mouse_genomes_project 9 43575292 43610090 + Gm16322 antisense antisense MGP_CBAJ_T0005351.1 MGP_CBAJ_G0004528.1 mouse_genomes_project 9 43576311 43606845 + Gm16322 antisense antisense MGP_CBAJ_T0092670.1 MGP_CBAJ_G0034674.1 mouse_genomes_project 9 77671633 77698168 + MGP_CBAJ_P0092670 Pygo1 protein_coding protein_coding MGP_CBAJ_T0010914.1 MGP_CBAJ_G0009052.1 mouse_genomes_project 9 13286587 13286646 + Mir7650 miRNA miRNA MGP_CBAJ_T0009118.1 MGP_CBAJ_G0007318.1 mouse_genomes_project 9 34013811 34031885 + 7630403G23Rik lincRNA lincRNA MGP_CBAJ_T0010948.1 MGP_CBAJ_G0009086.1 mouse_genomes_project 9 68742152 68742258 - Gm25640 miRNA miRNA MGP_CBAJ_T0094827.1 MGP_CBAJ_G0035117.1 mouse_genomes_project 9 134082856 134090461 + MGP_CBAJ_P0094827 Zkscan7 protein_coding protein_coding MGP_CBAJ_T0090870.1 MGP_CBAJ_G0034081.1 mouse_genomes_project 9 19421341 19432456 + MGP_CBAJ_P0090870 Rdh8 protein_coding protein_coding MGP_CBAJ_T0015850.1 MGP_CBAJ_G0013962.1 mouse_genomes_project 9 82851897 82853098 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005378.1 MGP_CBAJ_G0004544.1 mouse_genomes_project 9 63124479 63132182 + Gm7616 antisense antisense MGP_CBAJ_T0100845.1 MGP_CBAJ_G0039100.1 mouse_genomes_project 9 1965126 1965261 + Gm24896 snoRNA snoRNA MGP_CBAJ_T0091429.1 MGP_CBAJ_G0034324.1 mouse_genomes_project 9 41537898 41629045 + Clmp protein_coding processed_transcript MGP_CBAJ_T0091430.1 MGP_CBAJ_G0034324.1 mouse_genomes_project 9 41537949 41656323 + MGP_CBAJ_P0091430 Clmp protein_coding protein_coding MGP_CBAJ_T0091431.1 MGP_CBAJ_G0034324.1 mouse_genomes_project 9 41537972 41629168 + Clmp protein_coding retained_intron MGP_CBAJ_T0091432.1 MGP_CBAJ_G0034324.1 mouse_genomes_project 9 41645514 41653495 + Clmp protein_coding processed_transcript MGP_CBAJ_T0094391.1 MGP_CBAJ_G0034998.1 mouse_genomes_project 9 119927128 119930396 + MGP_CBAJ_P0094391 Ngp protein_coding protein_coding MGP_CBAJ_T0091207.1 MGP_CBAJ_G0034197.1 mouse_genomes_project 9 35779509 35781812 - MGP_CBAJ_P0091207 Pate1 protein_coding protein_coding MGP_CBAJ_T0091208.1 MGP_CBAJ_G0034197.1 mouse_genomes_project 9 35779854 35781831 - Pate1 protein_coding retained_intron MGP_CBAJ_T0094453.1 MGP_CBAJ_G0035011.1 mouse_genomes_project 9 120425249 120438027 + MGP_CBAJ_P0094453 Prss46 protein_coding protein_coding MGP_CBAJ_T0094454.1 MGP_CBAJ_G0035011.1 mouse_genomes_project 9 120431234 120438021 + MGP_CBAJ_P0094454 Prss46 protein_coding protein_coding MGP_CBAJ_T0100852.1 MGP_CBAJ_G0039107.1 mouse_genomes_project 9 13294444 13294544 + snoRNA snoRNA MGP_CBAJ_T0100851.1 MGP_CBAJ_G0039106.1 mouse_genomes_project 9 13289508 13289582 + Gm24357 snoRNA snoRNA MGP_CBAJ_T0009223.1 MGP_CBAJ_G0007402.1 mouse_genomes_project 9 116183969 116184744 - 4930429P21Rik lincRNA lincRNA MGP_CBAJ_T0009224.1 MGP_CBAJ_G0007402.1 mouse_genomes_project 9 116184479 116186680 - 4930429P21Rik lincRNA lincRNA MGP_CBAJ_T0092720.1 MGP_CBAJ_G0034688.1 mouse_genomes_project 9 79975433 80000813 + MGP_CBAJ_P0092720 Arpp19 protein_coding protein_coding MGP_CBAJ_T0092721.1 MGP_CBAJ_G0034688.1 mouse_genomes_project 9 79975433 80000794 + MGP_CBAJ_P0092721 Arpp19 protein_coding protein_coding MGP_CBAJ_T0092722.1 MGP_CBAJ_G0034688.1 mouse_genomes_project 9 79975496 79976302 + Arpp19 protein_coding retained_intron MGP_CBAJ_T0092723.1 MGP_CBAJ_G0034688.1 mouse_genomes_project 9 79975496 79997337 + MGP_CBAJ_P0092723 Arpp19 protein_coding protein_coding MGP_CBAJ_T0092724.1 MGP_CBAJ_G0034688.1 mouse_genomes_project 9 79975498 79998210 + MGP_CBAJ_P0092724 Arpp19 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092725.1 MGP_CBAJ_G0034688.1 mouse_genomes_project 9 79975537 80000813 + MGP_CBAJ_P0092725 Arpp19 protein_coding protein_coding MGP_CBAJ_T0092726.1 MGP_CBAJ_G0034688.1 mouse_genomes_project 9 79975568 79997392 + MGP_CBAJ_P0092726 Arpp19 protein_coding protein_coding MGP_CBAJ_T0092727.1 MGP_CBAJ_G0034688.1 mouse_genomes_project 9 79975638 79997321 + MGP_CBAJ_P0092727 Arpp19 protein_coding protein_coding MGP_CBAJ_T0092728.1 MGP_CBAJ_G0034688.1 mouse_genomes_project 9 79975736 79997304 + MGP_CBAJ_P0092728 Arpp19 protein_coding protein_coding MGP_CBAJ_T0092729.1 MGP_CBAJ_G0034688.1 mouse_genomes_project 9 79992487 79997883 + MGP_CBAJ_P0092729 Arpp19 protein_coding protein_coding MGP_CBAJ_T0092730.1 MGP_CBAJ_G0034688.1 mouse_genomes_project 9 79992561 79998576 + MGP_CBAJ_P0092730 Arpp19 protein_coding protein_coding MGP_CBAJ_T0094290.1 MGP_CBAJ_G0034987.1 mouse_genomes_project 9 119216086 119223997 + MGP_CBAJ_P0094290 Spink8 protein_coding protein_coding MGP_CBAJ_T0094291.1 MGP_CBAJ_G0034987.1 mouse_genomes_project 9 119219940 119230040 + MGP_CBAJ_P0094291 Spink8 protein_coding protein_coding MGP_CBAJ_T0094292.1 MGP_CBAJ_G0034987.1 mouse_genomes_project 9 119220023 119230035 + MGP_CBAJ_P0094292 Spink8 protein_coding protein_coding MGP_CBAJ_T0009125.1 MGP_CBAJ_G0007323.1 mouse_genomes_project 9 36929080 36947196 - 1700027I24Rik lincRNA lincRNA MGP_CBAJ_T0010978.1 MGP_CBAJ_G0009116.1 mouse_genomes_project 9 125672200 125672321 + Mir467h miRNA miRNA MGP_CBAJ_T0002355.1 MGP_CBAJ_G0002268.1 mouse_genomes_project 9 89119761 89122562 + TEC TEC MGP_CBAJ_T0091026.1 MGP_CBAJ_G0034145.1 mouse_genomes_project 9 23116079 23306074 + MGP_CBAJ_P0091026 Npsr1 protein_coding protein_coding MGP_CBAJ_T0091027.1 MGP_CBAJ_G0034145.1 mouse_genomes_project 9 23116101 23338004 + MGP_CBAJ_P0091027 Npsr1 protein_coding protein_coding MGP_CBAJ_T0091028.1 MGP_CBAJ_G0034145.1 mouse_genomes_project 9 23273638 23339365 + MGP_CBAJ_P0091028 Npsr1 protein_coding protein_coding MGP_CBAJ_T0091029.1 MGP_CBAJ_G0034145.1 mouse_genomes_project 9 23322104 23336477 + Npsr1 protein_coding processed_transcript MGP_CBAJ_T0092401.1 MGP_CBAJ_G0034623.1 mouse_genomes_project 9 69842464 69977251 + MGP_CBAJ_P0092401 Csnk1g1 protein_coding protein_coding MGP_CBAJ_T0092402.1 MGP_CBAJ_G0034623.1 mouse_genomes_project 9 69842514 69939533 + Csnk1g1 protein_coding retained_intron MGP_CBAJ_T0092403.1 MGP_CBAJ_G0034623.1 mouse_genomes_project 9 69842517 69980354 + MGP_CBAJ_P0092403 Csnk1g1 protein_coding protein_coding MGP_CBAJ_T0092404.1 MGP_CBAJ_G0034623.1 mouse_genomes_project 9 69842526 69980360 + MGP_CBAJ_P0092404 Csnk1g1 protein_coding protein_coding MGP_CBAJ_T0092405.1 MGP_CBAJ_G0034623.1 mouse_genomes_project 9 69842560 69894770 + MGP_CBAJ_P0092405 Csnk1g1 protein_coding protein_coding MGP_CBAJ_T0092406.1 MGP_CBAJ_G0034623.1 mouse_genomes_project 9 69842570 69911682 + Csnk1g1 protein_coding retained_intron MGP_CBAJ_T0092407.1 MGP_CBAJ_G0034623.1 mouse_genomes_project 9 69842628 69975781 + MGP_CBAJ_P0092407 Csnk1g1 protein_coding protein_coding MGP_CBAJ_T0092408.1 MGP_CBAJ_G0034623.1 mouse_genomes_project 9 69842979 69978420 + MGP_CBAJ_P0092408 Csnk1g1 protein_coding protein_coding MGP_CBAJ_T0092409.1 MGP_CBAJ_G0034623.1 mouse_genomes_project 9 69860292 69966232 + MGP_CBAJ_P0092409 Csnk1g1 protein_coding protein_coding MGP_CBAJ_T0092410.1 MGP_CBAJ_G0034623.1 mouse_genomes_project 9 69894458 69980350 + MGP_CBAJ_P0092410 Csnk1g1 protein_coding protein_coding MGP_CBAJ_T0092411.1 MGP_CBAJ_G0034623.1 mouse_genomes_project 9 69943113 69967676 + MGP_CBAJ_P0092411 Csnk1g1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092412.1 MGP_CBAJ_G0034623.1 mouse_genomes_project 9 69945442 69948457 + Csnk1g1 protein_coding retained_intron MGP_CBAJ_T0092413.1 MGP_CBAJ_G0034623.1 mouse_genomes_project 9 69945466 69975070 + MGP_CBAJ_P0092413 Csnk1g1 protein_coding protein_coding MGP_CBAJ_T0092414.1 MGP_CBAJ_G0034623.1 mouse_genomes_project 9 69945809 69966232 + MGP_CBAJ_P0092414 Csnk1g1 protein_coding protein_coding MGP_CBAJ_T0092415.1 MGP_CBAJ_G0034623.1 mouse_genomes_project 9 69971358 69975088 + Csnk1g1 protein_coding retained_intron MGP_CBAJ_T0093418.1 MGP_CBAJ_G0034842.1 mouse_genomes_project 9 110966735 110990253 + MGP_CBAJ_P0093418 Gm5627 protein_coding protein_coding MGP_CBAJ_T0009173.1 MGP_CBAJ_G0007362.1 mouse_genomes_project 9 83525705 83528668 + C920006O11Rik lincRNA lincRNA MGP_CBAJ_T0090965.1 MGP_CBAJ_G0034116.1 mouse_genomes_project 9 20544653 20587907 - MGP_CBAJ_P0090965 Kank2 protein_coding protein_coding MGP_CBAJ_T0091741.1 MGP_CBAJ_G0034423.1 mouse_genomes_project 9 50975731 51004237 + MGP_CBAJ_P0091741 Zw10 protein_coding protein_coding MGP_CBAJ_T0009154.1 MGP_CBAJ_G0007347.1 mouse_genomes_project 9 71909643 71911140 - M5C1000I18Rik lincRNA lincRNA MGP_CBAJ_T0009155.1 MGP_CBAJ_G0007347.1 mouse_genomes_project 9 71909644 71911162 - M5C1000I18Rik lincRNA lincRNA MGP_CBAJ_T0009156.1 MGP_CBAJ_G0007347.1 mouse_genomes_project 9 71909644 71911140 - M5C1000I18Rik lincRNA lincRNA MGP_CBAJ_T0092005.1 MGP_CBAJ_G0034511.1 mouse_genomes_project 9 59754735 59831740 + MGP_CBAJ_P0092005 Ptpn9 protein_coding protein_coding MGP_CBAJ_T0015932.1 MGP_CBAJ_G0014044.1 mouse_genomes_project 9 134094404 134094779 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0092107.1 MGP_CBAJ_G0034540.1 mouse_genomes_project 9 61140593 61146579 - MGP_CBAJ_P0092107 Islr2 protein_coding protein_coding MGP_CBAJ_T0092108.1 MGP_CBAJ_G0034540.1 mouse_genomes_project 9 61140593 61148613 - MGP_CBAJ_P0092108 Islr2 protein_coding protein_coding MGP_CBAJ_T0092109.1 MGP_CBAJ_G0034540.1 mouse_genomes_project 9 61140593 61146828 - MGP_CBAJ_P0092109 Islr2 protein_coding protein_coding MGP_CBAJ_T0092110.1 MGP_CBAJ_G0034540.1 mouse_genomes_project 9 61140593 61146093 - MGP_CBAJ_P0092110 Islr2 protein_coding protein_coding MGP_CBAJ_T0092111.1 MGP_CBAJ_G0034540.1 mouse_genomes_project 9 61140593 61146011 - MGP_CBAJ_P0092111 Islr2 protein_coding protein_coding MGP_CBAJ_T0093149.1 MGP_CBAJ_G0034784.1 mouse_genomes_project 9 101917467 102518407 + MGP_CBAJ_P0093149 Slc9a9 protein_coding protein_coding MGP_CBAJ_T0093150.1 MGP_CBAJ_G0034784.1 mouse_genomes_project 9 101917490 101974904 + Slc9a9 protein_coding processed_transcript MGP_CBAJ_T0093151.1 MGP_CBAJ_G0034784.1 mouse_genomes_project 9 102198824 102518414 + MGP_CBAJ_P0093151 Slc9a9 protein_coding unknown_likely_coding MGP_CBAJ_T0093152.1 MGP_CBAJ_G0034784.1 mouse_genomes_project 9 102398252 102401125 + Slc9a9 protein_coding retained_intron MGP_CBAJ_T0091865.1 MGP_CBAJ_G0034462.1 mouse_genomes_project 9 55613674 55698066 + MGP_CBAJ_P0091865 Exph5 protein_coding protein_coding MGP_CBAJ_T0091866.1 MGP_CBAJ_G0034462.1 mouse_genomes_project 9 55659920 55689500 + Exph5 protein_coding retained_intron MGP_CBAJ_T0091867.1 MGP_CBAJ_G0034462.1 mouse_genomes_project 9 55660013 55674463 + Exph5 protein_coding retained_intron MGP_CBAJ_T0092553.1 MGP_CBAJ_G0034656.1 mouse_genomes_project 9 75024042 75081429 + MGP_CBAJ_P0092553 Sltm protein_coding protein_coding MGP_CBAJ_T0099636.1 MGP_CBAJ_G0037891.1 mouse_genomes_project 9 101888607 101888703 + Gm24178 snRNA snRNA MGP_CBAJ_T0092458.1 MGP_CBAJ_G0034634.1 mouse_genomes_project 9 70833134 70835170 + MGP_CBAJ_P0092458 Gm10647 protein_coding protein_coding MGP_CBAJ_T0092966.1 MGP_CBAJ_G0034746.1 mouse_genomes_project 9 92017861 92081470 - MGP_CBAJ_P0092966 Ibtk protein_coding protein_coding MGP_CBAJ_T0092967.1 MGP_CBAJ_G0034746.1 mouse_genomes_project 9 92018043 92081470 - MGP_CBAJ_P0092967 Ibtk protein_coding nonsense_mediated_decay MGP_CBAJ_T0092968.1 MGP_CBAJ_G0034746.1 mouse_genomes_project 9 92018058 92051280 - Ibtk protein_coding retained_intron MGP_CBAJ_T0092969.1 MGP_CBAJ_G0034746.1 mouse_genomes_project 9 92038624 92048995 - Ibtk protein_coding retained_intron MGP_CBAJ_T0092970.1 MGP_CBAJ_G0034746.1 mouse_genomes_project 9 92050639 92081450 - Ibtk protein_coding retained_intron MGP_CBAJ_T0092971.1 MGP_CBAJ_G0034746.1 mouse_genomes_project 9 92058749 92061692 - Ibtk protein_coding retained_intron MGP_CBAJ_T0018279.1 MGP_CBAJ_G0015483.1 mouse_genomes_project 9 77056453 77065060 + Gm27230 processed_transcript lincRNA MGP_CBAJ_T0018280.1 MGP_CBAJ_G0015483.1 mouse_genomes_project 9 77056459 77063255 + Gm27230 processed_transcript lincRNA MGP_CBAJ_T0018281.1 MGP_CBAJ_G0015483.1 mouse_genomes_project 9 77063968 77064642 + Gm27230 processed_transcript retained_intron MGP_CBAJ_T0015875.1 MGP_CBAJ_G0013987.1 mouse_genomes_project 9 96964276 96964600 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0093912.1 MGP_CBAJ_G0034925.1 mouse_genomes_project 9 116814182 116831336 + MGP_CBAJ_P0093912 Camkv protein_coding protein_coding MGP_CBAJ_T0093913.1 MGP_CBAJ_G0034925.1 mouse_genomes_project 9 116814413 116831322 + Camkv protein_coding retained_intron MGP_CBAJ_T0093914.1 MGP_CBAJ_G0034925.1 mouse_genomes_project 9 116814423 116827835 + MGP_CBAJ_P0093914 Camkv protein_coding nonsense_mediated_decay MGP_CBAJ_T0093915.1 MGP_CBAJ_G0034925.1 mouse_genomes_project 9 116815815 116827184 + MGP_CBAJ_P0093915 Camkv protein_coding protein_coding MGP_CBAJ_T0093916.1 MGP_CBAJ_G0034925.1 mouse_genomes_project 9 116826905 116831328 + MGP_CBAJ_P0093916 Camkv protein_coding protein_coding MGP_CBAJ_T0092711.1 MGP_CBAJ_G0034685.1 mouse_genomes_project 9 78947555 78981929 + Wdr72 protein_coding processed_transcript MGP_CBAJ_T0092712.1 MGP_CBAJ_G0034685.1 mouse_genomes_project 9 78947555 79133121 + MGP_CBAJ_P0092712 Wdr72 protein_coding protein_coding MGP_CBAJ_T0092713.1 MGP_CBAJ_G0034685.1 mouse_genomes_project 9 78947603 78950888 + Wdr72 protein_coding processed_transcript MGP_CBAJ_T0092714.1 MGP_CBAJ_G0034685.1 mouse_genomes_project 9 78973464 79131641 + MGP_CBAJ_P0092714 Wdr72 protein_coding unknown_likely_coding MGP_CBAJ_T0092715.1 MGP_CBAJ_G0034685.1 mouse_genomes_project 9 79122674 79133226 + Wdr72 protein_coding processed_transcript MGP_CBAJ_T0092564.1 MGP_CBAJ_G0034661.1 mouse_genomes_project 9 75643878 75696001 - MGP_CBAJ_P0092564 Aqp9 protein_coding protein_coding MGP_CBAJ_T0092565.1 MGP_CBAJ_G0034661.1 mouse_genomes_project 9 75643880 75695972 - MGP_CBAJ_P0092565 Aqp9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092566.1 MGP_CBAJ_G0034661.1 mouse_genomes_project 9 75643881 75695345 - MGP_CBAJ_P0092566 Aqp9 protein_coding protein_coding MGP_CBAJ_T0092567.1 MGP_CBAJ_G0034661.1 mouse_genomes_project 9 75645063 75701477 - MGP_CBAJ_P0092567 Aqp9 protein_coding protein_coding MGP_CBAJ_T0092568.1 MGP_CBAJ_G0034661.1 mouse_genomes_project 9 75695684 75698050 - Aqp9 protein_coding processed_transcript MGP_CBAJ_T0092569.1 MGP_CBAJ_G0034661.1 mouse_genomes_project 9 75695740 75700713 - Aqp9 protein_coding processed_transcript MGP_CBAJ_T0092570.1 MGP_CBAJ_G0034661.1 mouse_genomes_project 9 75696186 75701502 - Aqp9 protein_coding processed_transcript MGP_CBAJ_T0092571.1 MGP_CBAJ_G0034661.1 mouse_genomes_project 9 75696186 75700453 - Aqp9 protein_coding processed_transcript MGP_CBAJ_T0092572.1 MGP_CBAJ_G0034661.1 mouse_genomes_project 9 75696187 75701497 - Aqp9 protein_coding processed_transcript MGP_CBAJ_T0092573.1 MGP_CBAJ_G0034661.1 mouse_genomes_project 9 75697964 75700669 - Aqp9 protein_coding processed_transcript MGP_CBAJ_T0094392.1 MGP_CBAJ_G0034999.1 mouse_genomes_project 9 119935034 119996556 - MGP_CBAJ_P0094392 Klhl18 protein_coding protein_coding MGP_CBAJ_T0094393.1 MGP_CBAJ_G0034999.1 mouse_genomes_project 9 119935042 119996552 - MGP_CBAJ_P0094393 Klhl18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094394.1 MGP_CBAJ_G0034999.1 mouse_genomes_project 9 119935042 119996651 - MGP_CBAJ_P0094394 Klhl18 protein_coding protein_coding MGP_CBAJ_T0094395.1 MGP_CBAJ_G0034999.1 mouse_genomes_project 9 119939973 119941843 - Klhl18 protein_coding retained_intron MGP_CBAJ_T0094396.1 MGP_CBAJ_G0034999.1 mouse_genomes_project 9 119945455 119964680 - MGP_CBAJ_P0094396 Klhl18 protein_coding protein_coding MGP_CBAJ_T0094397.1 MGP_CBAJ_G0034999.1 mouse_genomes_project 9 119946675 119957786 - Klhl18 protein_coding retained_intron MGP_CBAJ_T0093701.1 MGP_CBAJ_G0034897.1 mouse_genomes_project 9 115686506 115695714 - MGP_CBAJ_P0093701 Rbm15b protein_coding protein_coding MGP_CBAJ_T0093702.1 MGP_CBAJ_G0034897.1 mouse_genomes_project 9 115690339 115691208 - MGP_CBAJ_P0093702 Rbm15b protein_coding protein_coding MGP_CBAJ_T0091927.1 MGP_CBAJ_G0034485.1 mouse_genomes_project 9 57369545 57425185 + MGP_CBAJ_P0091927 Ireb2 protein_coding protein_coding MGP_CBAJ_T0090725.1 MGP_CBAJ_G0034014.1 mouse_genomes_project 9 12800026 12818098 - MGP_CBAJ_P0090725 Izumo1r protein_coding protein_coding MGP_CBAJ_T0090726.1 MGP_CBAJ_G0034014.1 mouse_genomes_project 9 12807262 12818163 - MGP_CBAJ_P0090726 Izumo1r protein_coding protein_coding MGP_CBAJ_T0090727.1 MGP_CBAJ_G0034014.1 mouse_genomes_project 9 12814236 12818146 - MGP_CBAJ_P0090727 Izumo1r protein_coding protein_coding MGP_CBAJ_T0090728.1 MGP_CBAJ_G0034014.1 mouse_genomes_project 9 12814241 12817970 - MGP_CBAJ_P0090728 Izumo1r protein_coding protein_coding MGP_CBAJ_T0090729.1 MGP_CBAJ_G0034014.1 mouse_genomes_project 9 12814983 12817968 - MGP_CBAJ_P0090729 Izumo1r protein_coding protein_coding MGP_CBAJ_T0091603.1 MGP_CBAJ_G0034377.1 mouse_genomes_project 9 46356763 46364262 - MGP_CBAJ_P0091603 Atp5l protein_coding protein_coding MGP_CBAJ_T0090959.1 MGP_CBAJ_G0034113.1 mouse_genomes_project 9 20366713 20468906 + MGP_CBAJ_P0090959 Smarca4 protein_coding protein_coding MGP_CBAJ_T0090960.1 MGP_CBAJ_G0034113.1 mouse_genomes_project 9 20366713 20468893 + MGP_CBAJ_P0090960 Smarca4 protein_coding protein_coding MGP_CBAJ_T0090961.1 MGP_CBAJ_G0034113.1 mouse_genomes_project 9 20366808 20468042 + MGP_CBAJ_P0090961 Smarca4 protein_coding protein_coding MGP_CBAJ_T0090962.1 MGP_CBAJ_G0034113.1 mouse_genomes_project 9 20388833 20444206 + MGP_CBAJ_P0090962 Smarca4 protein_coding protein_coding MGP_CBAJ_T0093522.1 MGP_CBAJ_G0034863.1 mouse_genomes_project 9 113639295 113641700 - MGP_CBAJ_P0093522 Nudt16 protein_coding protein_coding MGP_CBAJ_T0093523.1 MGP_CBAJ_G0034863.1 mouse_genomes_project 9 113639724 113642193 - MGP_CBAJ_P0093523 Nudt16 protein_coding protein_coding MGP_CBAJ_T0093524.1 MGP_CBAJ_G0034863.1 mouse_genomes_project 9 113640060 113642168 - Nudt16 protein_coding retained_intron MGP_CBAJ_T0093525.1 MGP_CBAJ_G0034863.1 mouse_genomes_project 9 113640060 113642168 - Nudt16 protein_coding retained_intron MGP_CBAJ_T0093526.1 MGP_CBAJ_G0034863.1 mouse_genomes_project 9 113640594 113642161 - MGP_CBAJ_P0093526 Nudt16 protein_coding protein_coding MGP_CBAJ_T0094834.1 MGP_CBAJ_G0035122.1 mouse_genomes_project 9 134249612 134250705 + Tgm4 protein_coding processed_transcript MGP_CBAJ_T0094835.1 MGP_CBAJ_G0035122.1 mouse_genomes_project 9 134249614 134268746 + Tgm4 protein_coding processed_transcript MGP_CBAJ_T0094836.1 MGP_CBAJ_G0035122.1 mouse_genomes_project 9 134249614 134284850 + MGP_CBAJ_P0094836 Tgm4 protein_coding protein_coding MGP_CBAJ_T0094837.1 MGP_CBAJ_G0035122.1 mouse_genomes_project 9 134255550 134266328 + Tgm4 protein_coding retained_intron MGP_CBAJ_T0002320.1 MGP_CBAJ_G0002233.1 mouse_genomes_project 9 35946536 35947619 + TEC TEC MGP_CBAJ_T0005421.1 MGP_CBAJ_G0004571.1 mouse_genomes_project 9 103435827 103437299 - C78334 antisense antisense MGP_CBAJ_T0005422.1 MGP_CBAJ_G0004571.1 mouse_genomes_project 9 103435835 103441989 - C78334 antisense antisense MGP_CBAJ_T0093581.1 MGP_CBAJ_G0034871.1 mouse_genomes_project 9 114601561 114610443 - Col6a4 protein_coding processed_transcript MGP_CBAJ_T0093582.1 MGP_CBAJ_G0034871.1 mouse_genomes_project 9 114602572 114718821 - MGP_CBAJ_P0093582 Col6a4 protein_coding protein_coding MGP_CBAJ_T0093583.1 MGP_CBAJ_G0034871.1 mouse_genomes_project 9 114693362 114694713 - Col6a4 protein_coding processed_transcript MGP_CBAJ_T0092200.1 MGP_CBAJ_G0034564.1 mouse_genomes_project 9 63794305 63914903 - MGP_CBAJ_P0092200 Lrrc49 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092201.1 MGP_CBAJ_G0034564.1 mouse_genomes_project 9 63794618 63877369 - MGP_CBAJ_P0092201 Lrrc49 protein_coding protein_coding MGP_CBAJ_T0092202.1 MGP_CBAJ_G0034564.1 mouse_genomes_project 9 63814167 63914937 - MGP_CBAJ_P0092202 Lrrc49 protein_coding protein_coding MGP_CBAJ_T0092203.1 MGP_CBAJ_G0034564.1 mouse_genomes_project 9 63814167 63914897 - MGP_CBAJ_P0092203 Lrrc49 protein_coding protein_coding MGP_CBAJ_T0092204.1 MGP_CBAJ_G0034564.1 mouse_genomes_project 9 63814177 63914316 - MGP_CBAJ_P0092204 Lrrc49 protein_coding protein_coding MGP_CBAJ_T0092205.1 MGP_CBAJ_G0034564.1 mouse_genomes_project 9 63814177 63914316 - MGP_CBAJ_P0092205 Lrrc49 protein_coding protein_coding MGP_CBAJ_T0092206.1 MGP_CBAJ_G0034564.1 mouse_genomes_project 9 63814759 63825479 - Lrrc49 protein_coding retained_intron MGP_CBAJ_T0092207.1 MGP_CBAJ_G0034564.1 mouse_genomes_project 9 63836644 63914685 - Lrrc49 protein_coding retained_intron MGP_CBAJ_T0092208.1 MGP_CBAJ_G0034564.1 mouse_genomes_project 9 63837198 63877278 - Lrrc49 protein_coding processed_transcript MGP_CBAJ_T0092209.1 MGP_CBAJ_G0034564.1 mouse_genomes_project 9 63907337 63914454 - MGP_CBAJ_P0092209 Lrrc49 protein_coding protein_coding MGP_CBAJ_T0091125.1 MGP_CBAJ_G0034177.1 mouse_genomes_project 9 31875577 32057634 + MGP_CBAJ_P0091125 Arhgap32 protein_coding protein_coding MGP_CBAJ_T0091126.1 MGP_CBAJ_G0034177.1 mouse_genomes_project 9 31889014 31954981 + MGP_CBAJ_P0091126 Arhgap32 protein_coding protein_coding MGP_CBAJ_T0091127.1 MGP_CBAJ_G0034177.1 mouse_genomes_project 9 31954925 31987795 + Arhgap32 protein_coding retained_intron MGP_CBAJ_T0091128.1 MGP_CBAJ_G0034177.1 mouse_genomes_project 9 31986879 32050396 + MGP_CBAJ_P0091128 Arhgap32 protein_coding protein_coding MGP_CBAJ_T0091129.1 MGP_CBAJ_G0034177.1 mouse_genomes_project 9 32009177 32053423 + MGP_CBAJ_P0091129 Arhgap32 protein_coding protein_coding MGP_CBAJ_T0091130.1 MGP_CBAJ_G0034177.1 mouse_genomes_project 9 32009520 32033313 + MGP_CBAJ_P0091130 Arhgap32 protein_coding protein_coding MGP_CBAJ_T0091131.1 MGP_CBAJ_G0034177.1 mouse_genomes_project 9 32032493 32036794 + Arhgap32 protein_coding retained_intron MGP_CBAJ_T0090650.1 MGP_CBAJ_G0033989.1 mouse_genomes_project 9 5316325 5382310 - MGP_CBAJ_P0090650 Cep126 protein_coding protein_coding MGP_CBAJ_T0018292.1 MGP_CBAJ_G0015488.1 mouse_genomes_project 9 85589221 85589653 + Gm3211 processed_transcript processed_transcript MGP_CBAJ_T0091358.1 MGP_CBAJ_G0034277.1 mouse_genomes_project 9 39602802 39603729 - MGP_CBAJ_P0091358 Olfr935 protein_coding protein_coding MGP_CBAJ_T0091114.1 MGP_CBAJ_G0034174.1 mouse_genomes_project 9 31055563 31092055 + MGP_CBAJ_P0091114 Nfrkb protein_coding protein_coding MGP_CBAJ_T0091115.1 MGP_CBAJ_G0034174.1 mouse_genomes_project 9 31055568 31092055 + MGP_CBAJ_P0091115 Nfrkb protein_coding nonsense_mediated_decay MGP_CBAJ_T0091116.1 MGP_CBAJ_G0034174.1 mouse_genomes_project 9 31055575 31064028 + MGP_CBAJ_P0091116 Nfrkb protein_coding nonsense_mediated_decay MGP_CBAJ_T0091117.1 MGP_CBAJ_G0034174.1 mouse_genomes_project 9 31055584 31092055 + MGP_CBAJ_P0091117 Nfrkb protein_coding nonsense_mediated_decay MGP_CBAJ_T0091118.1 MGP_CBAJ_G0034174.1 mouse_genomes_project 9 31055605 31092064 + MGP_CBAJ_P0091118 Nfrkb protein_coding unknown_likely_coding MGP_CBAJ_T0091119.1 MGP_CBAJ_G0034174.1 mouse_genomes_project 9 31062078 31068382 + Nfrkb protein_coding retained_intron MGP_CBAJ_T0091120.1 MGP_CBAJ_G0034174.1 mouse_genomes_project 9 31066415 31068354 + Nfrkb protein_coding retained_intron MGP_CBAJ_T0091121.1 MGP_CBAJ_G0034174.1 mouse_genomes_project 9 31068402 31092055 + Nfrkb protein_coding retained_intron MGP_CBAJ_T0091122.1 MGP_CBAJ_G0034174.1 mouse_genomes_project 9 31080154 31081200 + Nfrkb protein_coding retained_intron MGP_CBAJ_T0094700.1 MGP_CBAJ_G0035075.1 mouse_genomes_project 9 130621974 130701117 - MGP_CBAJ_P0094700 Scn11a protein_coding protein_coding MGP_CBAJ_T0092310.1 MGP_CBAJ_G0034591.1 mouse_genomes_project 9 67821210 67824586 + MGP_CBAJ_P0092310 Snapc5 protein_coding protein_coding MGP_CBAJ_T0091824.1 MGP_CBAJ_G0034448.1 mouse_genomes_project 9 52962520 52978881 + Ppp2r1b protein_coding processed_transcript MGP_CBAJ_T0091825.1 MGP_CBAJ_G0034448.1 mouse_genomes_project 9 52974097 53011831 + MGP_CBAJ_P0091825 Ppp2r1b protein_coding protein_coding MGP_CBAJ_T0091826.1 MGP_CBAJ_G0034448.1 mouse_genomes_project 9 52974097 53010399 + MGP_CBAJ_P0091826 Ppp2r1b protein_coding protein_coding MGP_CBAJ_T0091827.1 MGP_CBAJ_G0034448.1 mouse_genomes_project 9 52974110 52999038 + MGP_CBAJ_P0091827 Ppp2r1b protein_coding protein_coding MGP_CBAJ_T0091828.1 MGP_CBAJ_G0034448.1 mouse_genomes_project 9 52974130 52997694 + MGP_CBAJ_P0091828 Ppp2r1b protein_coding protein_coding MGP_CBAJ_T0091829.1 MGP_CBAJ_G0034448.1 mouse_genomes_project 9 52974136 53010406 + MGP_CBAJ_P0091829 Ppp2r1b protein_coding protein_coding MGP_CBAJ_T0091830.1 MGP_CBAJ_G0034448.1 mouse_genomes_project 9 52974137 53010399 + MGP_CBAJ_P0091830 Ppp2r1b protein_coding protein_coding MGP_CBAJ_T0091831.1 MGP_CBAJ_G0034448.1 mouse_genomes_project 9 52974139 52997541 + MGP_CBAJ_P0091831 Ppp2r1b protein_coding protein_coding MGP_CBAJ_T0091832.1 MGP_CBAJ_G0034448.1 mouse_genomes_project 9 52974152 52998014 + MGP_CBAJ_P0091832 Ppp2r1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0091833.1 MGP_CBAJ_G0034448.1 mouse_genomes_project 9 52987120 52997636 + MGP_CBAJ_P0091833 Ppp2r1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0091834.1 MGP_CBAJ_G0034448.1 mouse_genomes_project 9 52990610 52995669 + Ppp2r1b protein_coding processed_transcript MGP_CBAJ_T0091835.1 MGP_CBAJ_G0034448.1 mouse_genomes_project 9 52995691 52996743 + Ppp2r1b protein_coding retained_intron MGP_CBAJ_T0091720.1 MGP_CBAJ_G0034412.1 mouse_genomes_project 9 50145706 50168381 - MGP_CBAJ_P0091720 Nxpe2 protein_coding protein_coding MGP_CBAJ_T0091721.1 MGP_CBAJ_G0034412.1 mouse_genomes_project 9 50146844 50168317 - MGP_CBAJ_P0091721 Nxpe2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091722.1 MGP_CBAJ_G0034412.1 mouse_genomes_project 9 50154027 50180967 - MGP_CBAJ_P0091722 Nxpe2 protein_coding protein_coding MGP_CBAJ_T0091723.1 MGP_CBAJ_G0034412.1 mouse_genomes_project 9 50158777 50168337 - Nxpe2 protein_coding processed_transcript MGP_CBAJ_T0091724.1 MGP_CBAJ_G0034412.1 mouse_genomes_project 9 50159105 50180967 - Nxpe2 protein_coding processed_transcript MGP_CBAJ_T0092586.1 MGP_CBAJ_G0034666.1 mouse_genomes_project 9 76193935 76353882 - MGP_CBAJ_P0092586 Cgnl1 protein_coding protein_coding MGP_CBAJ_T0092587.1 MGP_CBAJ_G0034666.1 mouse_genomes_project 9 76193935 76353882 - MGP_CBAJ_P0092587 Cgnl1 protein_coding protein_coding MGP_CBAJ_T0092588.1 MGP_CBAJ_G0034666.1 mouse_genomes_project 9 76196284 76198532 - Cgnl1 protein_coding retained_intron MGP_CBAJ_T0092589.1 MGP_CBAJ_G0034666.1 mouse_genomes_project 9 76196636 76353840 - MGP_CBAJ_P0092589 Cgnl1 protein_coding protein_coding MGP_CBAJ_T0092590.1 MGP_CBAJ_G0034666.1 mouse_genomes_project 9 76197758 76198753 - Cgnl1 protein_coding retained_intron MGP_CBAJ_T0092591.1 MGP_CBAJ_G0034666.1 mouse_genomes_project 9 76200026 76215772 - Cgnl1 protein_coding processed_transcript MGP_CBAJ_T0090888.1 MGP_CBAJ_G0034090.1 mouse_genomes_project 9 19649649 19650808 + MGP_CBAJ_P0090888 Icam4 protein_coding protein_coding MGP_CBAJ_T0002423.1 MGP_CBAJ_G0002335.1 mouse_genomes_project 9 117501501 117503433 + TEC TEC MGP_CBAJ_T0091940.1 MGP_CBAJ_G0034489.1 mouse_genomes_project 9 57496685 57526634 + MGP_CBAJ_P0091940 Chrna5 protein_coding protein_coding MGP_CBAJ_T0091941.1 MGP_CBAJ_G0034489.1 mouse_genomes_project 9 57497421 57525430 + MGP_CBAJ_P0091941 Chrna5 protein_coding unknown_likely_coding MGP_CBAJ_T0091369.1 MGP_CBAJ_G0034288.1 mouse_genomes_project 9 40099703 40100250 - MGP_CBAJ_P0091369 protein_coding protein_coding MGP_CBAJ_T0098116.1 MGP_CBAJ_G0036389.1 mouse_genomes_project 9 65931049 65931158 + n-R5s84 rRNA rRNA MGP_CBAJ_T0090926.1 MGP_CBAJ_G0034107.1 mouse_genomes_project 9 20139303 20232949 + MGP_CBAJ_P0090926 Dnm2 protein_coding protein_coding MGP_CBAJ_T0090927.1 MGP_CBAJ_G0034107.1 mouse_genomes_project 9 20139327 20232333 + MGP_CBAJ_P0090927 Dnm2 protein_coding protein_coding MGP_CBAJ_T0090928.1 MGP_CBAJ_G0034107.1 mouse_genomes_project 9 20139340 20232335 + MGP_CBAJ_P0090928 Dnm2 protein_coding protein_coding MGP_CBAJ_T0090929.1 MGP_CBAJ_G0034107.1 mouse_genomes_project 9 20139363 20189340 + MGP_CBAJ_P0090929 Dnm2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090930.1 MGP_CBAJ_G0034107.1 mouse_genomes_project 9 20139366 20232321 + MGP_CBAJ_P0090930 Dnm2 protein_coding protein_coding MGP_CBAJ_T0090931.1 MGP_CBAJ_G0034107.1 mouse_genomes_project 9 20139371 20232319 + MGP_CBAJ_P0090931 Dnm2 protein_coding protein_coding MGP_CBAJ_T0090932.1 MGP_CBAJ_G0034107.1 mouse_genomes_project 9 20139491 20231597 + MGP_CBAJ_P0090932 Dnm2 protein_coding protein_coding MGP_CBAJ_T0090933.1 MGP_CBAJ_G0034107.1 mouse_genomes_project 9 20139491 20213422 + MGP_CBAJ_P0090933 Dnm2 protein_coding unknown_likely_coding MGP_CBAJ_T0090934.1 MGP_CBAJ_G0034107.1 mouse_genomes_project 9 20139638 20215023 + Dnm2 protein_coding processed_transcript MGP_CBAJ_T0090935.1 MGP_CBAJ_G0034107.1 mouse_genomes_project 9 20139639 20232949 + MGP_CBAJ_P0090935 Dnm2 protein_coding protein_coding MGP_CBAJ_T0090936.1 MGP_CBAJ_G0034107.1 mouse_genomes_project 9 20174694 20175158 + Dnm2 protein_coding processed_transcript MGP_CBAJ_T0090937.1 MGP_CBAJ_G0034107.1 mouse_genomes_project 9 20198071 20222908 + MGP_CBAJ_P0090937 Dnm2 protein_coding protein_coding MGP_CBAJ_T0090938.1 MGP_CBAJ_G0034107.1 mouse_genomes_project 9 20202243 20232954 + Dnm2 protein_coding retained_intron MGP_CBAJ_T0090939.1 MGP_CBAJ_G0034107.1 mouse_genomes_project 9 20217539 20229817 + Dnm2 protein_coding retained_intron MGP_CBAJ_T0090940.1 MGP_CBAJ_G0034107.1 mouse_genomes_project 9 20230301 20231594 + Dnm2 protein_coding processed_transcript MGP_CBAJ_T0091477.1 MGP_CBAJ_G0034343.1 mouse_genomes_project 9 45340463 45348291 + MGP_CBAJ_P0091477 Thy1 protein_coding protein_coding MGP_CBAJ_T0018302.1 MGP_CBAJ_G0015492.1 mouse_genomes_project 9 102995972 102997266 - Gm16127 processed_transcript processed_transcript MGP_CBAJ_T0005410.1 MGP_CBAJ_G0004567.1 mouse_genomes_project 9 102841045 102842362 + Gm28424 antisense antisense MGP_CBAJ_T0091219.1 MGP_CBAJ_G0034208.1 mouse_genomes_project 9 36897807 36900657 - MGP_CBAJ_P0091219 A630095E13Rik protein_coding protein_coding MGP_CBAJ_T0091220.1 MGP_CBAJ_G0034208.1 mouse_genomes_project 9 36897807 36900657 - MGP_CBAJ_P0091220 A630095E13Rik protein_coding protein_coding MGP_CBAJ_T0091221.1 MGP_CBAJ_G0034208.1 mouse_genomes_project 9 36897809 36905483 - A630095E13Rik protein_coding retained_intron MGP_CBAJ_T0015845.1 MGP_CBAJ_G0013957.1 mouse_genomes_project 9 82068258 82068556 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0094063.1 MGP_CBAJ_G0034950.1 mouse_genomes_project 9 117421812 117427241 + MGP_CBAJ_P0094063 Ccdc71 protein_coding protein_coding MGP_CBAJ_T0094064.1 MGP_CBAJ_G0034950.1 mouse_genomes_project 9 117421820 117424571 + MGP_CBAJ_P0094064 Ccdc71 protein_coding protein_coding MGP_CBAJ_T0094065.1 MGP_CBAJ_G0034950.1 mouse_genomes_project 9 117422717 117427109 + MGP_CBAJ_P0094065 Ccdc71 protein_coding protein_coding MGP_CBAJ_T0091926.1 MGP_CBAJ_G0034484.1 mouse_genomes_project 9 57246506 57254840 + MGP_CBAJ_P0091926 Crabp1 protein_coding protein_coding MGP_CBAJ_T0092871.1 MGP_CBAJ_G0034731.1 mouse_genomes_project 9 85489118 85668543 - MGP_CBAJ_P0092871 Filip1 protein_coding protein_coding MGP_CBAJ_T0092872.1 MGP_CBAJ_G0034731.1 mouse_genomes_project 9 85489124 85508235 - Filip1 protein_coding processed_transcript MGP_CBAJ_T0092873.1 MGP_CBAJ_G0034731.1 mouse_genomes_project 9 85494728 85652775 - MGP_CBAJ_P0092873 Filip1 protein_coding protein_coding MGP_CBAJ_T0094694.1 MGP_CBAJ_G0035073.1 mouse_genomes_project 9 130322671 130407757 - MGP_CBAJ_P0094694 Scn5a protein_coding protein_coding MGP_CBAJ_T0094695.1 MGP_CBAJ_G0035073.1 mouse_genomes_project 9 130322673 130424082 - MGP_CBAJ_P0094695 Scn5a protein_coding protein_coding MGP_CBAJ_T0094696.1 MGP_CBAJ_G0035073.1 mouse_genomes_project 9 130323587 130424082 - MGP_CBAJ_P0094696 Scn5a protein_coding protein_coding MGP_CBAJ_T0094697.1 MGP_CBAJ_G0035073.1 mouse_genomes_project 9 130324841 130423958 - MGP_CBAJ_P0094697 Scn5a protein_coding unknown_likely_coding MGP_CBAJ_T0094698.1 MGP_CBAJ_G0035073.1 mouse_genomes_project 9 130407615 130408582 - MGP_CBAJ_P0094698 Scn5a protein_coding protein_coding MGP_CBAJ_T0090917.1 MGP_CBAJ_G0034102.1 mouse_genomes_project 9 19960805 19963552 - MGP_CBAJ_P0090917 Cdkn2d protein_coding protein_coding MGP_CBAJ_T0099597.1 MGP_CBAJ_G0037852.1 mouse_genomes_project 9 38283384 38283583 - Gm24764 snRNA snRNA MGP_CBAJ_T0091882.1 MGP_CBAJ_G0034468.1 mouse_genomes_project 9 55960200 56018832 - MGP_CBAJ_P0091882 Cul5 protein_coding protein_coding MGP_CBAJ_T0091883.1 MGP_CBAJ_G0034468.1 mouse_genomes_project 9 55960200 56021339 - MGP_CBAJ_P0091883 Cul5 protein_coding protein_coding MGP_CBAJ_T0091884.1 MGP_CBAJ_G0034468.1 mouse_genomes_project 9 55962218 55967652 - Cul5 protein_coding retained_intron MGP_CBAJ_T0091885.1 MGP_CBAJ_G0034468.1 mouse_genomes_project 9 55962642 56018836 - MGP_CBAJ_P0091885 Cul5 protein_coding protein_coding MGP_CBAJ_T0091886.1 MGP_CBAJ_G0034468.1 mouse_genomes_project 9 55974523 55996425 - Cul5 protein_coding retained_intron MGP_CBAJ_T0091887.1 MGP_CBAJ_G0034468.1 mouse_genomes_project 9 55979213 56018812 - Cul5 protein_coding retained_intron MGP_CBAJ_T0091888.1 MGP_CBAJ_G0034468.1 mouse_genomes_project 9 55990366 55996521 - Cul5 protein_coding retained_intron MGP_CBAJ_T0091889.1 MGP_CBAJ_G0034468.1 mouse_genomes_project 9 55996279 56008207 - Cul5 protein_coding processed_transcript MGP_CBAJ_T0091890.1 MGP_CBAJ_G0034468.1 mouse_genomes_project 9 56004878 56018397 - MGP_CBAJ_P0091890 Cul5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094029.1 MGP_CBAJ_G0034944.1 mouse_genomes_project 9 117281710 117282610 + Gpx1 protein_coding retained_intron MGP_CBAJ_T0094030.1 MGP_CBAJ_G0034944.1 mouse_genomes_project 9 117281861 117283151 + MGP_CBAJ_P0094030 Gpx1 protein_coding protein_coding MGP_CBAJ_T0094031.1 MGP_CBAJ_G0034944.1 mouse_genomes_project 9 117282050 117283058 + MGP_CBAJ_P0094031 Gpx1 protein_coding protein_coding MGP_CBAJ_T0094032.1 MGP_CBAJ_G0034944.1 mouse_genomes_project 9 117282083 117283058 + MGP_CBAJ_P0094032 Gpx1 protein_coding protein_coding MGP_CBAJ_T0015903.1 MGP_CBAJ_G0014015.1 mouse_genomes_project 9 109127015 109127366 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0090902.1 MGP_CBAJ_G0034098.1 mouse_genomes_project 9 19890212 19899821 - MGP_CBAJ_P0090902 Keap1 protein_coding protein_coding MGP_CBAJ_T0090903.1 MGP_CBAJ_G0034098.1 mouse_genomes_project 9 19890213 19899560 - MGP_CBAJ_P0090903 Keap1 protein_coding protein_coding MGP_CBAJ_T0090904.1 MGP_CBAJ_G0034098.1 mouse_genomes_project 9 19890549 19899302 - MGP_CBAJ_P0090904 Keap1 protein_coding protein_coding MGP_CBAJ_T0090905.1 MGP_CBAJ_G0034098.1 mouse_genomes_project 9 19891115 19899568 - MGP_CBAJ_P0090905 Keap1 protein_coding protein_coding MGP_CBAJ_T0090906.1 MGP_CBAJ_G0034098.1 mouse_genomes_project 9 19896605 19897682 - Keap1 protein_coding processed_transcript MGP_CBAJ_T0093079.1 MGP_CBAJ_G0034770.1 mouse_genomes_project 9 96600650 96606575 + MGP_CBAJ_P0093079 Rasgrf1 protein_coding protein_coding MGP_CBAJ_T0093080.1 MGP_CBAJ_G0034770.1 mouse_genomes_project 9 96600651 96723648 + MGP_CBAJ_P0093080 Rasgrf1 protein_coding protein_coding MGP_CBAJ_T0093081.1 MGP_CBAJ_G0034770.1 mouse_genomes_project 9 96600651 96606562 + MGP_CBAJ_P0093081 Rasgrf1 protein_coding protein_coding MGP_CBAJ_T0093082.1 MGP_CBAJ_G0034770.1 mouse_genomes_project 9 96600654 96620028 + Rasgrf1 protein_coding retained_intron MGP_CBAJ_T0010913.1 MGP_CBAJ_G0009051.1 mouse_genomes_project 9 11370265 11370366 + Gm22643 miRNA miRNA MGP_CBAJ_T0094289.1 MGP_CBAJ_G0034986.1 mouse_genomes_project 9 118935842 118959360 - MGP_CBAJ_P0094289 Fbxw25 protein_coding protein_coding MGP_CBAJ_T0093317.1 MGP_CBAJ_G0034822.1 mouse_genomes_project 9 107296594 107391601 - MGP_CBAJ_P0093317 Armc8 protein_coding protein_coding MGP_CBAJ_T0093318.1 MGP_CBAJ_G0034822.1 mouse_genomes_project 9 107338390 107391348 - MGP_CBAJ_P0093318 Armc8 protein_coding protein_coding MGP_CBAJ_T0093319.1 MGP_CBAJ_G0034822.1 mouse_genomes_project 9 107369170 107391365 - Armc8 protein_coding retained_intron MGP_CBAJ_T0091306.1 MGP_CBAJ_G0034232.1 mouse_genomes_project 9 38322126 38323062 + MGP_CBAJ_P0091306 Olfr877 protein_coding protein_coding MGP_CBAJ_T0092383.1 MGP_CBAJ_G0034618.1 mouse_genomes_project 9 69526155 69560603 + MGP_CBAJ_P0092383 Rbpms2 protein_coding protein_coding MGP_CBAJ_T0092384.1 MGP_CBAJ_G0034618.1 mouse_genomes_project 9 69526964 69560580 + MGP_CBAJ_P0092384 Rbpms2 protein_coding protein_coding MGP_CBAJ_T0092167.1 MGP_CBAJ_G0034558.1 mouse_genomes_project 9 62791831 62817638 + MGP_CBAJ_P0092167 Pkm protein_coding unknown_likely_coding MGP_CBAJ_T0092168.1 MGP_CBAJ_G0034558.1 mouse_genomes_project 9 62791891 62817635 + MGP_CBAJ_P0092168 Pkm protein_coding protein_coding MGP_CBAJ_T0091331.1 MGP_CBAJ_G0034256.1 mouse_genomes_project 9 39043107 39044044 + MGP_CBAJ_P0091331 Olfr905 protein_coding protein_coding MGP_CBAJ_T0093327.1 MGP_CBAJ_G0034825.1 mouse_genomes_project 9 107457152 107465451 + MGP_CBAJ_P0093327 Dzip1l protein_coding protein_coding MGP_CBAJ_T0093328.1 MGP_CBAJ_G0034825.1 mouse_genomes_project 9 107457198 107506352 + MGP_CBAJ_P0093328 Dzip1l protein_coding protein_coding MGP_CBAJ_T0093329.1 MGP_CBAJ_G0034825.1 mouse_genomes_project 9 107457234 107506352 + MGP_CBAJ_P0093329 Dzip1l protein_coding protein_coding MGP_CBAJ_T0093330.1 MGP_CBAJ_G0034825.1 mouse_genomes_project 9 107457499 107506352 + MGP_CBAJ_P0093330 Dzip1l protein_coding protein_coding MGP_CBAJ_T0093331.1 MGP_CBAJ_G0034825.1 mouse_genomes_project 9 107462515 107506259 + MGP_CBAJ_P0093331 Dzip1l protein_coding protein_coding MGP_CBAJ_T0093332.1 MGP_CBAJ_G0034825.1 mouse_genomes_project 9 107478170 107485014 + Dzip1l protein_coding processed_transcript MGP_CBAJ_T0093333.1 MGP_CBAJ_G0034825.1 mouse_genomes_project 9 107484293 107487763 + Dzip1l protein_coding retained_intron MGP_CBAJ_T0015906.1 MGP_CBAJ_G0014018.1 mouse_genomes_project 9 109543167 109543532 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100897.1 MGP_CBAJ_G0039152.1 mouse_genomes_project 9 94343505 94343637 - Gm25528 snoRNA snoRNA MGP_CBAJ_T0094469.1 MGP_CBAJ_G0035016.1 mouse_genomes_project 9 120539167 120545594 - MGP_CBAJ_P0094469 Tdgf1 protein_coding protein_coding MGP_CBAJ_T0094470.1 MGP_CBAJ_G0035016.1 mouse_genomes_project 9 120539801 120545530 - MGP_CBAJ_P0094470 Tdgf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094471.1 MGP_CBAJ_G0035016.1 mouse_genomes_project 9 120541735 120545511 - MGP_CBAJ_P0094471 Tdgf1 protein_coding protein_coding MGP_CBAJ_T0094472.1 MGP_CBAJ_G0035016.1 mouse_genomes_project 9 120542109 120544285 - MGP_CBAJ_P0094472 Tdgf1 protein_coding protein_coding MGP_CBAJ_T0097856.1 MGP_CBAJ_G0036129.1 mouse_genomes_project 9 17511761 17512710 + pseudogene pseudogene MGP_CBAJ_T0092177.1 MGP_CBAJ_G0034561.1 mouse_genomes_project 9 62893464 63097961 + MGP_CBAJ_P0092177 Myo9a protein_coding protein_coding MGP_CBAJ_T0092178.1 MGP_CBAJ_G0034561.1 mouse_genomes_project 9 62893464 63097961 + MGP_CBAJ_P0092178 Myo9a protein_coding protein_coding MGP_CBAJ_T0092179.1 MGP_CBAJ_G0034561.1 mouse_genomes_project 9 62893464 63097961 + MGP_CBAJ_P0092179 Myo9a protein_coding protein_coding MGP_CBAJ_T0092180.1 MGP_CBAJ_G0034561.1 mouse_genomes_project 9 63033683 63047042 + Myo9a protein_coding processed_transcript MGP_CBAJ_T0092181.1 MGP_CBAJ_G0034561.1 mouse_genomes_project 9 63059877 63071548 + Myo9a protein_coding retained_intron MGP_CBAJ_T0092182.1 MGP_CBAJ_G0034561.1 mouse_genomes_project 9 63071120 63079855 + Myo9a protein_coding retained_intron MGP_CBAJ_T0092183.1 MGP_CBAJ_G0034561.1 mouse_genomes_project 9 63072373 63081782 + Myo9a protein_coding retained_intron MGP_CBAJ_T0092184.1 MGP_CBAJ_G0034561.1 mouse_genomes_project 9 63079102 63080145 + Myo9a protein_coding retained_intron MGP_CBAJ_T0097860.1 MGP_CBAJ_G0036133.1 mouse_genomes_project 9 45728480 45729199 - pseudogene pseudogene MGP_CBAJ_T0093739.1 MGP_CBAJ_G0034902.1 mouse_genomes_project 9 116173492 116182541 + MGP_CBAJ_P0093739 6430571L13Rik protein_coding protein_coding MGP_CBAJ_T0093740.1 MGP_CBAJ_G0034902.1 mouse_genomes_project 9 116180978 116185116 + 6430571L13Rik protein_coding processed_transcript MGP_CBAJ_T0099625.1 MGP_CBAJ_G0037880.1 mouse_genomes_project 9 77716351 77716458 + Gm23567 snRNA snRNA MGP_CBAJ_T0091333.1 MGP_CBAJ_G0034258.1 mouse_genomes_project 9 39069533 39070466 + MGP_CBAJ_P0091333 Olfr907 protein_coding protein_coding MGP_CBAJ_T0093387.1 MGP_CBAJ_G0034837.1 mouse_genomes_project 9 110092830 110097570 + MGP_CBAJ_P0093387 9630041A04Rik protein_coding protein_coding MGP_CBAJ_T0101188.1 MGP_CBAJ_G0039354.1 mouse_genomes_project 9 12759604 12759952 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0100855.1 MGP_CBAJ_G0039110.1 mouse_genomes_project 9 13304419 13304495 - Gm24339 snoRNA snoRNA MGP_CBAJ_T0093352.1 MGP_CBAJ_G0034831.1 mouse_genomes_project 9 108596360 108769421 + MGP_CBAJ_P0093352 Stag1 protein_coding protein_coding MGP_CBAJ_T0093353.1 MGP_CBAJ_G0034831.1 mouse_genomes_project 9 108653441 108837333 + MGP_CBAJ_P0093353 Stag1 protein_coding protein_coding MGP_CBAJ_T0093354.1 MGP_CBAJ_G0034831.1 mouse_genomes_project 9 108653441 109015780 + MGP_CBAJ_P0093354 Stag1 protein_coding protein_coding MGP_CBAJ_T0093355.1 MGP_CBAJ_G0034831.1 mouse_genomes_project 9 108653593 108771014 + Stag1 protein_coding retained_intron MGP_CBAJ_T0093356.1 MGP_CBAJ_G0034831.1 mouse_genomes_project 9 108653606 108743591 + Stag1 protein_coding retained_intron MGP_CBAJ_T0093357.1 MGP_CBAJ_G0034831.1 mouse_genomes_project 9 108653606 108743610 + Stag1 protein_coding retained_intron MGP_CBAJ_T0093358.1 MGP_CBAJ_G0034831.1 mouse_genomes_project 9 108653606 109015779 + MGP_CBAJ_P0093358 Stag1 protein_coding protein_coding MGP_CBAJ_T0093359.1 MGP_CBAJ_G0034831.1 mouse_genomes_project 9 108653609 108918364 + MGP_CBAJ_P0093359 Stag1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093360.1 MGP_CBAJ_G0034831.1 mouse_genomes_project 9 108653629 109014632 + MGP_CBAJ_P0093360 Stag1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093361.1 MGP_CBAJ_G0034831.1 mouse_genomes_project 9 108653761 109014639 + MGP_CBAJ_P0093361 Stag1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093362.1 MGP_CBAJ_G0034831.1 mouse_genomes_project 9 108653763 108807953 + MGP_CBAJ_P0093362 Stag1 protein_coding protein_coding MGP_CBAJ_T0093363.1 MGP_CBAJ_G0034831.1 mouse_genomes_project 9 108837245 109014649 + Stag1 protein_coding processed_transcript MGP_CBAJ_T0093364.1 MGP_CBAJ_G0034831.1 mouse_genomes_project 9 108888032 108900422 + Stag1 protein_coding retained_intron MGP_CBAJ_T0093365.1 MGP_CBAJ_G0034831.1 mouse_genomes_project 9 108896281 109014067 + MGP_CBAJ_P0093365 Stag1 protein_coding protein_coding MGP_CBAJ_T0093366.1 MGP_CBAJ_G0034831.1 mouse_genomes_project 9 108899399 108907062 + Stag1 protein_coding retained_intron MGP_CBAJ_T0093367.1 MGP_CBAJ_G0034831.1 mouse_genomes_project 9 108943083 109008926 + MGP_CBAJ_P0093367 Stag1 protein_coding protein_coding MGP_CBAJ_T0093368.1 MGP_CBAJ_G0034831.1 mouse_genomes_project 9 109013001 109016617 + Stag1 protein_coding retained_intron MGP_CBAJ_T0091750.1 MGP_CBAJ_G0034428.1 mouse_genomes_project 9 51415110 51466450 - MGP_CBAJ_P0091750 Ttc12 protein_coding protein_coding MGP_CBAJ_T0091751.1 MGP_CBAJ_G0034428.1 mouse_genomes_project 9 51437940 51466440 - Ttc12 protein_coding retained_intron MGP_CBAJ_T0015864.1 MGP_CBAJ_G0013976.1 mouse_genomes_project 9 92129608 92130416 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0090607.1 MGP_CBAJ_G0033975.1 mouse_genomes_project 9 4463429 4468836 + MGP_CBAJ_P0090607 Mmp12 protein_coding protein_coding MGP_CBAJ_T0090608.1 MGP_CBAJ_G0033975.1 mouse_genomes_project 9 4463445 4477012 + MGP_CBAJ_P0090608 Mmp12 protein_coding protein_coding MGP_CBAJ_T0090609.1 MGP_CBAJ_G0033975.1 mouse_genomes_project 9 4466422 4479009 + MGP_CBAJ_P0090609 Mmp12 protein_coding protein_coding MGP_CBAJ_T0090610.1 MGP_CBAJ_G0033975.1 mouse_genomes_project 9 4466422 4490073 + MGP_CBAJ_P0090610 Mmp12 protein_coding protein_coding MGP_CBAJ_T0090611.1 MGP_CBAJ_G0033975.1 mouse_genomes_project 9 4466454 4476211 + Mmp12 protein_coding retained_intron MGP_CBAJ_T0090612.1 MGP_CBAJ_G0033975.1 mouse_genomes_project 9 4466454 4467382 + Mmp12 protein_coding processed_transcript MGP_CBAJ_T0090613.1 MGP_CBAJ_G0033975.1 mouse_genomes_project 9 4466454 4477436 + MGP_CBAJ_P0090613 Mmp12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093059.1 MGP_CBAJ_G0034764.1 mouse_genomes_project 9 95067391 95101705 + MGP_CBAJ_P0093059 Zfp949 protein_coding protein_coding MGP_CBAJ_T0093060.1 MGP_CBAJ_G0034764.1 mouse_genomes_project 9 95067415 95092660 + MGP_CBAJ_P0093060 Zfp949 protein_coding protein_coding MGP_CBAJ_T0093061.1 MGP_CBAJ_G0034764.1 mouse_genomes_project 9 95067456 95098612 + Zfp949 protein_coding retained_intron MGP_CBAJ_T0093062.1 MGP_CBAJ_G0034764.1 mouse_genomes_project 9 95067471 95074187 + MGP_CBAJ_P0093062 Zfp949 protein_coding protein_coding MGP_CBAJ_T0093063.1 MGP_CBAJ_G0034764.1 mouse_genomes_project 9 95067554 95101705 + MGP_CBAJ_P0093063 Zfp949 protein_coding protein_coding MGP_CBAJ_T0094820.1 MGP_CBAJ_G0035114.1 mouse_genomes_project 9 133990930 134023143 + MGP_CBAJ_P0094820 Tcaim protein_coding protein_coding MGP_CBAJ_T0094821.1 MGP_CBAJ_G0035114.1 mouse_genomes_project 9 133990952 133997254 + Tcaim protein_coding processed_transcript MGP_CBAJ_T0094822.1 MGP_CBAJ_G0035114.1 mouse_genomes_project 9 133990987 134023136 + MGP_CBAJ_P0094822 Tcaim protein_coding nonsense_mediated_decay MGP_CBAJ_T0091233.1 MGP_CBAJ_G0034211.1 mouse_genomes_project 9 36991967 37017720 - MGP_CBAJ_P0091233 Stt3a protein_coding protein_coding MGP_CBAJ_T0091234.1 MGP_CBAJ_G0034211.1 mouse_genomes_project 9 36992469 37030231 - MGP_CBAJ_P0091234 Stt3a protein_coding protein_coding MGP_CBAJ_T0091235.1 MGP_CBAJ_G0034211.1 mouse_genomes_project 9 37014994 37030196 - MGP_CBAJ_P0091235 Stt3a protein_coding nonsense_mediated_decay MGP_CBAJ_T0091236.1 MGP_CBAJ_G0034211.1 mouse_genomes_project 9 37020379 37021383 - Stt3a protein_coding retained_intron MGP_CBAJ_T0091237.1 MGP_CBAJ_G0034211.1 mouse_genomes_project 9 37020802 37029927 - MGP_CBAJ_P0091237 Stt3a protein_coding protein_coding MGP_CBAJ_T0091238.1 MGP_CBAJ_G0034211.1 mouse_genomes_project 9 37025223 37030150 - Stt3a protein_coding retained_intron MGP_CBAJ_T0091239.1 MGP_CBAJ_G0034211.1 mouse_genomes_project 9 37025443 37030193 - Stt3a protein_coding retained_intron MGP_CBAJ_T0100859.1 MGP_CBAJ_G0039114.1 mouse_genomes_project 9 23369954 23370049 + Gm22380 snoRNA snoRNA MGP_CBAJ_T0098121.1 MGP_CBAJ_G0036394.1 mouse_genomes_project 9 103988539 103988621 - Gm27289 rRNA rRNA MGP_CBAJ_T0090670.1 MGP_CBAJ_G0033999.1 mouse_genomes_project 9 11369029 11471736 + MGP_CBAJ_P0090670 protein_coding protein_coding MGP_CBAJ_T0090671.1 MGP_CBAJ_G0033999.1 mouse_genomes_project 9 11370685 11467356 + MGP_CBAJ_P0090671 protein_coding protein_coding MGP_CBAJ_T0090672.1 MGP_CBAJ_G0033999.1 mouse_genomes_project 9 11411498 11467356 + protein_coding processed_transcript MGP_CBAJ_T0090673.1 MGP_CBAJ_G0033999.1 mouse_genomes_project 9 11411498 11471881 + MGP_CBAJ_P0090673 protein_coding protein_coding MGP_CBAJ_T0002426.1 MGP_CBAJ_G0002338.1 mouse_genomes_project 9 117941703 117942247 - TEC TEC MGP_CBAJ_T0094506.1 MGP_CBAJ_G0035022.1 mouse_genomes_project 9 120874845 120920836 - MGP_CBAJ_P0094506 Mlh1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094507.1 MGP_CBAJ_G0035022.1 mouse_genomes_project 9 120874869 120921080 - MGP_CBAJ_P0094507 Mlh1 protein_coding protein_coding MGP_CBAJ_T0094508.1 MGP_CBAJ_G0035022.1 mouse_genomes_project 9 120875146 120877231 - Mlh1 protein_coding retained_intron MGP_CBAJ_T0094509.1 MGP_CBAJ_G0035022.1 mouse_genomes_project 9 120876478 120877543 - Mlh1 protein_coding retained_intron MGP_CBAJ_T0094510.1 MGP_CBAJ_G0035022.1 mouse_genomes_project 9 120876496 120920890 - Mlh1 protein_coding retained_intron MGP_CBAJ_T0094511.1 MGP_CBAJ_G0035022.1 mouse_genomes_project 9 120887888 120896716 - Mlh1 protein_coding retained_intron MGP_CBAJ_T0094512.1 MGP_CBAJ_G0035022.1 mouse_genomes_project 9 120888174 120907470 - MGP_CBAJ_P0094512 Mlh1 protein_coding protein_coding MGP_CBAJ_T0094513.1 MGP_CBAJ_G0035022.1 mouse_genomes_project 9 120898178 120911500 - MGP_CBAJ_P0094513 Mlh1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094514.1 MGP_CBAJ_G0035022.1 mouse_genomes_project 9 120907166 120920824 - Mlh1 protein_coding processed_transcript MGP_CBAJ_T0091623.1 MGP_CBAJ_G0034385.1 mouse_genomes_project 9 46580142 46608608 - MGP_CBAJ_P0091623 Gm10684 protein_coding protein_coding MGP_CBAJ_T0098119.1 MGP_CBAJ_G0036392.1 mouse_genomes_project 9 78893565 78893684 + n-R5s86 rRNA rRNA MGP_CBAJ_T0091133.1 MGP_CBAJ_G0034179.1 mouse_genomes_project 9 32183833 32213137 + MGP_CBAJ_P0091133 Kcnj1 protein_coding protein_coding MGP_CBAJ_T0091134.1 MGP_CBAJ_G0034179.1 mouse_genomes_project 9 32207908 32213137 + MGP_CBAJ_P0091134 Kcnj1 protein_coding protein_coding MGP_CBAJ_T0090996.1 MGP_CBAJ_G0034131.1 mouse_genomes_project 9 20927050 20956831 + MGP_CBAJ_P0090996 Cnn1 protein_coding unknown_likely_coding MGP_CBAJ_T0093176.1 MGP_CBAJ_G0034791.1 mouse_genomes_project 9 103257520 103268283 + Atr protein_coding retained_intron MGP_CBAJ_T0093177.1 MGP_CBAJ_G0034791.1 mouse_genomes_project 9 103257520 103359930 + MGP_CBAJ_P0093177 Atr protein_coding protein_coding MGP_CBAJ_T0093178.1 MGP_CBAJ_G0034791.1 mouse_genomes_project 9 103257562 103305406 + Atr protein_coding retained_intron MGP_CBAJ_T0093179.1 MGP_CBAJ_G0034791.1 mouse_genomes_project 9 103257573 103263500 + Atr protein_coding retained_intron MGP_CBAJ_T0093180.1 MGP_CBAJ_G0034791.1 mouse_genomes_project 9 103257578 103261679 + Atr protein_coding retained_intron MGP_CBAJ_T0093181.1 MGP_CBAJ_G0034791.1 mouse_genomes_project 9 103257592 103269875 + Atr protein_coding retained_intron MGP_CBAJ_T0093182.1 MGP_CBAJ_G0034791.1 mouse_genomes_project 9 103257648 103359910 + MGP_CBAJ_P0093182 Atr protein_coding unknown_likely_coding MGP_CBAJ_T0093183.1 MGP_CBAJ_G0034791.1 mouse_genomes_project 9 103290209 103292537 + Atr protein_coding retained_intron MGP_CBAJ_T0093184.1 MGP_CBAJ_G0034791.1 mouse_genomes_project 9 103318100 103322258 + Atr protein_coding retained_intron MGP_CBAJ_T0093185.1 MGP_CBAJ_G0034791.1 mouse_genomes_project 9 103342668 103344443 + Atr protein_coding retained_intron MGP_CBAJ_T0093186.1 MGP_CBAJ_G0034791.1 mouse_genomes_project 9 103345772 103349443 + Atr protein_coding retained_intron MGP_CBAJ_T0094581.1 MGP_CBAJ_G0035034.1 mouse_genomes_project 9 124018187 124065795 + MGP_CBAJ_P0094581 Susd5 protein_coding protein_coding MGP_CBAJ_T0093994.1 MGP_CBAJ_G0034936.1 mouse_genomes_project 9 116979284 116983852 + MGP_CBAJ_P0093994 Mst1 protein_coding protein_coding MGP_CBAJ_T0093995.1 MGP_CBAJ_G0034936.1 mouse_genomes_project 9 116979302 116983844 + MGP_CBAJ_P0093995 Mst1 protein_coding protein_coding MGP_CBAJ_T0093996.1 MGP_CBAJ_G0034936.1 mouse_genomes_project 9 116979331 116981163 + MGP_CBAJ_P0093996 Mst1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093997.1 MGP_CBAJ_G0034936.1 mouse_genomes_project 9 116980249 116983784 + MGP_CBAJ_P0093997 Mst1 protein_coding unknown_likely_coding MGP_CBAJ_T0093998.1 MGP_CBAJ_G0034936.1 mouse_genomes_project 9 116983153 116983847 + MGP_CBAJ_P0093998 Mst1 protein_coding protein_coding MGP_CBAJ_T0002331.1 MGP_CBAJ_G0002244.1 mouse_genomes_project 9 76649561 76652237 - TEC TEC MGP_CBAJ_T0091849.1 MGP_CBAJ_G0034455.1 mouse_genomes_project 9 53447933 53491509 - MGP_CBAJ_P0091849 1810046K07Rik protein_coding protein_coding MGP_CBAJ_T0091850.1 MGP_CBAJ_G0034455.1 mouse_genomes_project 9 53448691 53472852 - MGP_CBAJ_P0091850 1810046K07Rik protein_coding protein_coding MGP_CBAJ_T0090798.1 MGP_CBAJ_G0034048.1 mouse_genomes_project 9 17765076 17766018 - MGP_CBAJ_P0090798 Olfr846 protein_coding protein_coding MGP_CBAJ_T0094442.1 MGP_CBAJ_G0035006.1 mouse_genomes_project 9 120296721 120326907 + MGP_CBAJ_P0094442 Myl3 protein_coding protein_coding MGP_CBAJ_T0094443.1 MGP_CBAJ_G0035006.1 mouse_genomes_project 9 120318280 120327202 + MGP_CBAJ_P0094443 Myl3 protein_coding protein_coding MGP_CBAJ_T0094444.1 MGP_CBAJ_G0035006.1 mouse_genomes_project 9 120326176 120327551 + Myl3 protein_coding retained_intron MGP_CBAJ_T0015862.1 MGP_CBAJ_G0013974.1 mouse_genomes_project 9 91214256 91218230 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0093574.1 MGP_CBAJ_G0034869.1 mouse_genomes_project 9 114247306 114409954 - MGP_CBAJ_P0093574 Col6a6 protein_coding protein_coding MGP_CBAJ_T0093575.1 MGP_CBAJ_G0034869.1 mouse_genomes_project 9 114248926 114409879 - MGP_CBAJ_P0093575 Col6a6 protein_coding protein_coding MGP_CBAJ_T0093576.1 MGP_CBAJ_G0034869.1 mouse_genomes_project 9 114349286 114391509 - MGP_CBAJ_P0093576 Col6a6 protein_coding protein_coding MGP_CBAJ_T0018289.1 MGP_CBAJ_G0015486.1 mouse_genomes_project 9 82844233 82845742 + Gm19569 processed_transcript lincRNA MGP_CBAJ_T0018290.1 MGP_CBAJ_G0015486.1 mouse_genomes_project 9 82844476 82845742 + Gm19569 processed_transcript retained_intron MGP_CBAJ_T0093273.1 MGP_CBAJ_G0034808.1 mouse_genomes_project 9 106258149 106261745 + Copb2 protein_coding retained_intron MGP_CBAJ_T0093274.1 MGP_CBAJ_G0034808.1 mouse_genomes_project 9 106258159 106286494 + MGP_CBAJ_P0093274 Copb2 protein_coding protein_coding MGP_CBAJ_T0093275.1 MGP_CBAJ_G0034808.1 mouse_genomes_project 9 106278062 106279334 + Copb2 protein_coding retained_intron MGP_CBAJ_T0093276.1 MGP_CBAJ_G0034808.1 mouse_genomes_project 9 106284956 106285941 + Copb2 protein_coding retained_intron MGP_CBAJ_T0093277.1 MGP_CBAJ_G0034808.1 mouse_genomes_project 9 106285457 106286143 + Copb2 protein_coding retained_intron MGP_CBAJ_T0093278.1 MGP_CBAJ_G0034808.1 mouse_genomes_project 9 106285658 106286373 + Copb2 protein_coding retained_intron MGP_CBAJ_T0090974.1 MGP_CBAJ_G0034120.1 mouse_genomes_project 9 20729754 20740408 - MGP_CBAJ_P0090974 Tmem205 protein_coding protein_coding MGP_CBAJ_T0090975.1 MGP_CBAJ_G0034120.1 mouse_genomes_project 9 20729754 20740408 - MGP_CBAJ_P0090975 Tmem205 protein_coding protein_coding MGP_CBAJ_T0090741.1 MGP_CBAJ_G0034021.1 mouse_genomes_project 9 13294870 13312837 - MGP_CBAJ_P0090741 Cep295 protein_coding protein_coding MGP_CBAJ_T0090742.1 MGP_CBAJ_G0034021.1 mouse_genomes_project 9 13294870 13340679 - MGP_CBAJ_P0090742 Cep295 protein_coding protein_coding MGP_CBAJ_T0090743.1 MGP_CBAJ_G0034021.1 mouse_genomes_project 9 13294872 13312944 - Cep295 protein_coding retained_intron MGP_CBAJ_T0090744.1 MGP_CBAJ_G0034021.1 mouse_genomes_project 9 13294875 13320538 - Cep295 protein_coding retained_intron MGP_CBAJ_T0090745.1 MGP_CBAJ_G0034021.1 mouse_genomes_project 9 13295090 13340634 - MGP_CBAJ_P0090745 Cep295 protein_coding protein_coding MGP_CBAJ_T0090746.1 MGP_CBAJ_G0034021.1 mouse_genomes_project 9 13295228 13295913 - Cep295 protein_coding retained_intron MGP_CBAJ_T0090747.1 MGP_CBAJ_G0034021.1 mouse_genomes_project 9 13295414 13337601 - MGP_CBAJ_P0090747 Cep295 protein_coding protein_coding MGP_CBAJ_T0090748.1 MGP_CBAJ_G0034021.1 mouse_genomes_project 9 13300954 13304135 - MGP_CBAJ_P0090748 Cep295 protein_coding protein_coding MGP_CBAJ_T0090749.1 MGP_CBAJ_G0034021.1 mouse_genomes_project 9 13303497 13311423 - MGP_CBAJ_P0090749 Cep295 protein_coding protein_coding MGP_CBAJ_T0090750.1 MGP_CBAJ_G0034021.1 mouse_genomes_project 9 13303560 13305032 - Cep295 protein_coding retained_intron MGP_CBAJ_T0090751.1 MGP_CBAJ_G0034021.1 mouse_genomes_project 9 13322920 13333795 - Cep295 protein_coding processed_transcript MGP_CBAJ_T0090752.1 MGP_CBAJ_G0034021.1 mouse_genomes_project 9 13324109 13334325 - Cep295 protein_coding retained_intron MGP_CBAJ_T0090753.1 MGP_CBAJ_G0034021.1 mouse_genomes_project 9 13326031 13334706 - Cep295 protein_coding retained_intron MGP_CBAJ_T0090839.1 MGP_CBAJ_G0034074.1 mouse_genomes_project 9 19057398 19083743 - MGP_CBAJ_P0090839 Zfp266 protein_coding protein_coding MGP_CBAJ_T0090840.1 MGP_CBAJ_G0034074.1 mouse_genomes_project 9 19061395 19083734 - MGP_CBAJ_P0090840 Zfp266 protein_coding protein_coding MGP_CBAJ_T0093131.1 MGP_CBAJ_G0034778.1 mouse_genomes_project 9 99246346 99261850 + MGP_CBAJ_P0093131 Plscr1 protein_coding protein_coding MGP_CBAJ_T0091070.1 MGP_CBAJ_G0034161.1 mouse_genomes_project 9 26379655 26441124 - MGP_CBAJ_P0091070 Jam3 protein_coding protein_coding MGP_CBAJ_T0091071.1 MGP_CBAJ_G0034161.1 mouse_genomes_project 9 26382938 26441121 - MGP_CBAJ_P0091071 Jam3 protein_coding protein_coding MGP_CBAJ_T0091217.1 MGP_CBAJ_G0034206.1 mouse_genomes_project 9 36797059 36812558 - MGP_CBAJ_P0091217 Gm5615 protein_coding protein_coding MGP_CBAJ_T0002435.1 MGP_CBAJ_G0002347.1 mouse_genomes_project 9 129048709 129049547 - TEC TEC MGP_CBAJ_T0091038.1 MGP_CBAJ_G0034149.1 mouse_genomes_project 9 23777010 23830711 - MGP_CBAJ_P0091038 Tbx20 protein_coding protein_coding MGP_CBAJ_T0091039.1 MGP_CBAJ_G0034149.1 mouse_genomes_project 9 23796566 23830711 - MGP_CBAJ_P0091039 Tbx20 protein_coding protein_coding MGP_CBAJ_T0005427.1 MGP_CBAJ_G0004575.1 mouse_genomes_project 9 104649573 104652819 + Gm16185 antisense antisense MGP_CBAJ_T0092126.1 MGP_CBAJ_G0034546.1 mouse_genomes_project 9 61521439 61537888 - MGP_CBAJ_P0092126 Cd276 protein_coding protein_coding MGP_CBAJ_T0092127.1 MGP_CBAJ_G0034546.1 mouse_genomes_project 9 61521441 61554502 - MGP_CBAJ_P0092127 Cd276 protein_coding protein_coding MGP_CBAJ_T0091390.1 MGP_CBAJ_G0034303.1 mouse_genomes_project 9 40472062 40472995 + MGP_CBAJ_P0091390 Olfr967 protein_coding protein_coding MGP_CBAJ_T0015815.1 MGP_CBAJ_G0013927.1 mouse_genomes_project 9 61710175 61710343 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0093077.1 MGP_CBAJ_G0034769.1 mouse_genomes_project 9 96397230 96410467 - MGP_CBAJ_P0093077 Ankrd34c protein_coding protein_coding MGP_CBAJ_T0093078.1 MGP_CBAJ_G0034769.1 mouse_genomes_project 9 96400454 96410437 - MGP_CBAJ_P0093078 Ankrd34c protein_coding protein_coding MGP_CBAJ_T0091189.1 MGP_CBAJ_G0034190.1 mouse_genomes_project 9 35492143 35526449 + MGP_CBAJ_P0091189 Cdon protein_coding protein_coding MGP_CBAJ_T0091190.1 MGP_CBAJ_G0034190.1 mouse_genomes_project 9 35492569 35526424 + MGP_CBAJ_P0091190 Cdon protein_coding nonsense_mediated_decay MGP_CBAJ_T0091191.1 MGP_CBAJ_G0034190.1 mouse_genomes_project 9 35492612 35583857 + MGP_CBAJ_P0091191 Cdon protein_coding protein_coding MGP_CBAJ_T0091192.1 MGP_CBAJ_G0034190.1 mouse_genomes_project 9 35494609 35546189 + MGP_CBAJ_P0091192 Cdon protein_coding protein_coding MGP_CBAJ_T0091193.1 MGP_CBAJ_G0034190.1 mouse_genomes_project 9 35523171 35583856 + MGP_CBAJ_P0091193 Cdon protein_coding protein_coding MGP_CBAJ_T0091194.1 MGP_CBAJ_G0034190.1 mouse_genomes_project 9 35528521 35545119 + MGP_CBAJ_P0091194 Cdon protein_coding protein_coding MGP_CBAJ_T0094688.1 MGP_CBAJ_G0035070.1 mouse_genomes_project 9 130165927 130210983 + MGP_CBAJ_P0094688 Xylb protein_coding protein_coding MGP_CBAJ_T0090717.1 MGP_CBAJ_G0034012.1 mouse_genomes_project 9 12691671 12745280 + MGP_CBAJ_P0090717 Mre11a protein_coding protein_coding MGP_CBAJ_T0090718.1 MGP_CBAJ_G0034012.1 mouse_genomes_project 9 12691693 12747757 + MGP_CBAJ_P0090718 Mre11a protein_coding protein_coding MGP_CBAJ_T0090719.1 MGP_CBAJ_G0034012.1 mouse_genomes_project 9 12691719 12706624 + MGP_CBAJ_P0090719 Mre11a protein_coding protein_coding MGP_CBAJ_T0090720.1 MGP_CBAJ_G0034012.1 mouse_genomes_project 9 12704164 12719367 + MGP_CBAJ_P0090720 Mre11a protein_coding protein_coding MGP_CBAJ_T0090721.1 MGP_CBAJ_G0034012.1 mouse_genomes_project 9 12704177 12710848 + MGP_CBAJ_P0090721 Mre11a protein_coding protein_coding MGP_CBAJ_T0099637.1 MGP_CBAJ_G0037892.1 mouse_genomes_project 9 103343336 103343514 + Gm24004 snRNA snRNA MGP_CBAJ_T0090762.1 MGP_CBAJ_G0034025.1 mouse_genomes_project 9 13863779 13923848 - MGP_CBAJ_P0090762 Mtnr1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0090763.1 MGP_CBAJ_G0034025.1 mouse_genomes_project 9 13909411 13923752 - MGP_CBAJ_P0090763 Mtnr1b protein_coding protein_coding MGP_CBAJ_T0100898.1 MGP_CBAJ_G0039153.1 mouse_genomes_project 9 94486321 94486451 - Gm23176 snoRNA snoRNA MGP_CBAJ_T0091977.1 MGP_CBAJ_G0034498.1 mouse_genomes_project 9 58137823 58527841 - MGP_CBAJ_P0091977 Scaper protein_coding protein_coding MGP_CBAJ_T0091978.1 MGP_CBAJ_G0034498.1 mouse_genomes_project 9 58343630 58551018 - MGP_CBAJ_P0091978 Scaper protein_coding unknown_likely_coding MGP_CBAJ_T0091682.1 MGP_CBAJ_G0034402.1 mouse_genomes_project 9 47584300 47820279 + MGP_CBAJ_P0091682 Sik3 protein_coding protein_coding MGP_CBAJ_T0091683.1 MGP_CBAJ_G0034402.1 mouse_genomes_project 9 47584344 47818357 + MGP_CBAJ_P0091683 Sik3 protein_coding protein_coding MGP_CBAJ_T0091684.1 MGP_CBAJ_G0034402.1 mouse_genomes_project 9 47584478 47798145 + MGP_CBAJ_P0091684 Sik3 protein_coding protein_coding MGP_CBAJ_T0091685.1 MGP_CBAJ_G0034402.1 mouse_genomes_project 9 47584480 47817316 + MGP_CBAJ_P0091685 Sik3 protein_coding protein_coding MGP_CBAJ_T0091686.1 MGP_CBAJ_G0034402.1 mouse_genomes_project 9 47737161 47820273 + Sik3 protein_coding processed_transcript MGP_CBAJ_T0091687.1 MGP_CBAJ_G0034402.1 mouse_genomes_project 9 47815653 47817316 + MGP_CBAJ_P0091687 Sik3 protein_coding protein_coding MGP_CBAJ_T0091329.1 MGP_CBAJ_G0034254.1 mouse_genomes_project 9 39009828 39010884 + MGP_CBAJ_P0091329 Olfr902 protein_coding protein_coding MGP_CBAJ_T0093533.1 MGP_CBAJ_G0034866.1 mouse_genomes_project 9 113925723 113936044 + MGP_CBAJ_P0093533 Aste1 protein_coding protein_coding MGP_CBAJ_T0093534.1 MGP_CBAJ_G0034866.1 mouse_genomes_project 9 113925731 113932478 + Aste1 protein_coding retained_intron MGP_CBAJ_T0093535.1 MGP_CBAJ_G0034866.1 mouse_genomes_project 9 113925746 113935753 + Aste1 protein_coding retained_intron MGP_CBAJ_T0093536.1 MGP_CBAJ_G0034866.1 mouse_genomes_project 9 113925875 113931949 + MGP_CBAJ_P0093536 Aste1 protein_coding protein_coding MGP_CBAJ_T0093537.1 MGP_CBAJ_G0034866.1 mouse_genomes_project 9 113927552 113935459 + MGP_CBAJ_P0093537 Aste1 protein_coding protein_coding MGP_CBAJ_T0093538.1 MGP_CBAJ_G0034866.1 mouse_genomes_project 9 113928150 113935614 + MGP_CBAJ_P0093538 Aste1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093539.1 MGP_CBAJ_G0034866.1 mouse_genomes_project 9 113928150 113940865 + MGP_CBAJ_P0093539 Aste1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093540.1 MGP_CBAJ_G0034866.1 mouse_genomes_project 9 113931126 113935614 + Aste1 protein_coding processed_transcript MGP_CBAJ_T0093541.1 MGP_CBAJ_G0034866.1 mouse_genomes_project 9 113931810 113936044 + MGP_CBAJ_P0093541 Aste1 protein_coding protein_coding MGP_CBAJ_T0090594.1 MGP_CBAJ_G0033970.1 mouse_genomes_project 9 3194852 3422465 + MGP_CBAJ_P0090594 Pdgfd protein_coding protein_coding MGP_CBAJ_T0090595.1 MGP_CBAJ_G0033970.1 mouse_genomes_project 9 3194901 3423784 + MGP_CBAJ_P0090595 Pdgfd protein_coding protein_coding MGP_CBAJ_T0091199.1 MGP_CBAJ_G0034193.1 mouse_genomes_project 9 35646775 35656365 - MGP_CBAJ_P0091199 Hyls1 protein_coding protein_coding MGP_CBAJ_T0091200.1 MGP_CBAJ_G0034193.1 mouse_genomes_project 9 35650414 35656064 - Hyls1 protein_coding retained_intron MGP_CBAJ_T0002424.1 MGP_CBAJ_G0002336.1 mouse_genomes_project 9 117521502 117522648 + TEC TEC MGP_CBAJ_T0090891.1 MGP_CBAJ_G0034093.1 mouse_genomes_project 9 19692592 19698587 - MGP_CBAJ_P0090891 Fdx1l protein_coding protein_coding MGP_CBAJ_T0092674.1 MGP_CBAJ_G0034677.1 mouse_genomes_project 9 77723413 77728853 - MGP_CBAJ_P0092674 Ccpg1os protein_coding protein_coding MGP_CBAJ_T0092675.1 MGP_CBAJ_G0034677.1 mouse_genomes_project 9 77727025 77728859 - Ccpg1os protein_coding retained_intron MGP_CBAJ_T0002325.1 MGP_CBAJ_G0002238.1 mouse_genomes_project 9 76454178 76457388 - TEC TEC MGP_CBAJ_T0018319.1 MGP_CBAJ_G0015498.1 mouse_genomes_project 9 116947931 116954861 + Gm20529 processed_transcript processed_transcript MGP_CBAJ_T0015834.1 MGP_CBAJ_G0013946.1 mouse_genomes_project 9 77548302 77548609 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015837.1 MGP_CBAJ_G0013949.1 mouse_genomes_project 9 79232620 79233098 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010982.1 MGP_CBAJ_G0009120.1 mouse_genomes_project 9 131918453 131918515 + Mir7090 miRNA miRNA MGP_CBAJ_T0092375.1 MGP_CBAJ_G0034617.1 mouse_genomes_project 9 69465206 69477852 + MGP_CBAJ_P0092375 Pif1 protein_coding protein_coding MGP_CBAJ_T0092376.1 MGP_CBAJ_G0034617.1 mouse_genomes_project 9 69465228 69465884 + MGP_CBAJ_P0092376 Pif1 protein_coding protein_coding MGP_CBAJ_T0092377.1 MGP_CBAJ_G0034617.1 mouse_genomes_project 9 69465239 69477850 + MGP_CBAJ_P0092377 Pif1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092378.1 MGP_CBAJ_G0034617.1 mouse_genomes_project 9 69465251 69468539 + Pif1 protein_coding retained_intron MGP_CBAJ_T0092379.1 MGP_CBAJ_G0034617.1 mouse_genomes_project 9 69465251 69477855 + MGP_CBAJ_P0092379 Pif1 protein_coding protein_coding MGP_CBAJ_T0092380.1 MGP_CBAJ_G0034617.1 mouse_genomes_project 9 69465259 69477855 + Pif1 protein_coding retained_intron MGP_CBAJ_T0092381.1 MGP_CBAJ_G0034617.1 mouse_genomes_project 9 69465267 69477855 + MGP_CBAJ_P0092381 Pif1 protein_coding protein_coding MGP_CBAJ_T0092382.1 MGP_CBAJ_G0034617.1 mouse_genomes_project 9 69465272 69466327 + MGP_CBAJ_P0092382 Pif1 protein_coding protein_coding MGP_CBAJ_T0091316.1 MGP_CBAJ_G0034241.1 mouse_genomes_project 9 38607790 38608826 + MGP_CBAJ_P0091316 Olfr889 protein_coding protein_coding MGP_CBAJ_T0099606.1 MGP_CBAJ_G0037861.1 mouse_genomes_project 9 53005557 53005663 + Gm25558 snRNA snRNA MGP_CBAJ_T0094859.1 MGP_CBAJ_G0035130.1 mouse_genomes_project 9 134816780 134881796 + MGP_CBAJ_P0094859 Sacm1l protein_coding protein_coding MGP_CBAJ_T0094860.1 MGP_CBAJ_G0035130.1 mouse_genomes_project 9 134816788 134881801 + MGP_CBAJ_P0094860 Sacm1l protein_coding unknown_likely_coding MGP_CBAJ_T0015904.1 MGP_CBAJ_G0014016.1 mouse_genomes_project 9 109374744 109375150 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0091041.1 MGP_CBAJ_G0034151.1 mouse_genomes_project 9 24400622 24462031 + MGP_CBAJ_P0091041 Sept7 protein_coding protein_coding MGP_CBAJ_T0091042.1 MGP_CBAJ_G0034151.1 mouse_genomes_project 9 24400622 24462031 + MGP_CBAJ_P0091042 Sept7 protein_coding protein_coding MGP_CBAJ_T0005355.1 MGP_CBAJ_G0004531.1 mouse_genomes_project 9 47407704 47409293 - Gm16536 antisense antisense MGP_CBAJ_T0005399.1 MGP_CBAJ_G0004560.1 mouse_genomes_project 9 85333910 85336042 + 4930562D21Rik antisense antisense MGP_CBAJ_T0093419.1 MGP_CBAJ_G0034843.1 mouse_genomes_project 9 111085371 111166232 + MGP_CBAJ_P0093419 Ryk protein_coding protein_coding MGP_CBAJ_T0093420.1 MGP_CBAJ_G0034843.1 mouse_genomes_project 9 111085426 111166643 + MGP_CBAJ_P0093420 Ryk protein_coding protein_coding MGP_CBAJ_T0093421.1 MGP_CBAJ_G0034843.1 mouse_genomes_project 9 111085436 111166995 + MGP_CBAJ_P0093421 Ryk protein_coding nonsense_mediated_decay MGP_CBAJ_T0093422.1 MGP_CBAJ_G0034843.1 mouse_genomes_project 9 111097278 111112774 + Ryk protein_coding processed_transcript MGP_CBAJ_T0093423.1 MGP_CBAJ_G0034843.1 mouse_genomes_project 9 111125054 111138157 + Ryk protein_coding retained_intron MGP_CBAJ_T0093424.1 MGP_CBAJ_G0034843.1 mouse_genomes_project 9 111157292 111158284 + Ryk protein_coding retained_intron MGP_CBAJ_T0092512.1 MGP_CBAJ_G0034646.1 mouse_genomes_project 9 73804745 73808232 - MGP_CBAJ_P0092512 Gm4978 protein_coding protein_coding MGP_CBAJ_T0094863.1 MGP_CBAJ_G0035132.1 mouse_genomes_project 9 134928779 134982303 - MGP_CBAJ_P0094863 protein_coding protein_coding MGP_CBAJ_T0094864.1 MGP_CBAJ_G0035132.1 mouse_genomes_project 9 134953511 134982200 - MGP_CBAJ_P0094864 protein_coding protein_coding MGP_CBAJ_T0092807.1 MGP_CBAJ_G0034708.1 mouse_genomes_project 9 83061883 83102463 + MGP_CBAJ_P0092807 Gclc protein_coding protein_coding MGP_CBAJ_T0093075.1 MGP_CBAJ_G0034768.1 mouse_genomes_project 9 96368965 96374886 - MGP_CBAJ_P0093075 Tmed3 protein_coding protein_coding MGP_CBAJ_T0093076.1 MGP_CBAJ_G0034768.1 mouse_genomes_project 9 96373043 96374641 - Tmed3 protein_coding retained_intron MGP_CBAJ_T0010942.1 MGP_CBAJ_G0009080.1 mouse_genomes_project 9 57182042 57182111 + Mir5710 miRNA miRNA MGP_CBAJ_T0090716.1 MGP_CBAJ_G0034011.1 mouse_genomes_project 9 12687226 12689982 - MGP_CBAJ_P0090716 Ankrd49 protein_coding protein_coding MGP_CBAJ_T0009139.1 MGP_CBAJ_G0007334.1 mouse_genomes_project 9 55571184 55593178 + 4930510E17Rik lincRNA lincRNA MGP_CBAJ_T0094518.1 MGP_CBAJ_G0035024.1 mouse_genomes_project 9 120965122 121058571 + MGP_CBAJ_P0094518 Trank1 protein_coding protein_coding MGP_CBAJ_T0094519.1 MGP_CBAJ_G0035024.1 mouse_genomes_project 9 120965323 121019081 + Trank1 protein_coding processed_transcript MGP_CBAJ_T0094520.1 MGP_CBAJ_G0035024.1 mouse_genomes_project 9 120965479 121006307 + MGP_CBAJ_P0094520 Trank1 protein_coding protein_coding MGP_CBAJ_T0094521.1 MGP_CBAJ_G0035024.1 mouse_genomes_project 9 121035810 121058571 + Trank1 protein_coding processed_transcript MGP_CBAJ_T0094522.1 MGP_CBAJ_G0035024.1 mouse_genomes_project 9 121035873 121052022 + Trank1 protein_coding processed_transcript MGP_CBAJ_T0094523.1 MGP_CBAJ_G0035024.1 mouse_genomes_project 9 121035878 121048132 + Trank1 protein_coding processed_transcript MGP_CBAJ_T0094524.1 MGP_CBAJ_G0035024.1 mouse_genomes_project 9 121049132 121052940 + Trank1 protein_coding retained_intron MGP_CBAJ_T0098474.1 MGP_CBAJ_G0036734.1 mouse_genomes_project 9 94942649 94944802 - Gm28229 sense_intronic sense_intronic MGP_CBAJ_T0093023.1 MGP_CBAJ_G0034756.1 mouse_genomes_project 9 93392571 93455126 + MGP_CBAJ_P0093023 Cyb5r4 protein_coding protein_coding MGP_CBAJ_T0093024.1 MGP_CBAJ_G0034756.1 mouse_genomes_project 9 93392644 93445600 + Cyb5r4 protein_coding processed_transcript MGP_CBAJ_T0093025.1 MGP_CBAJ_G0034756.1 mouse_genomes_project 9 93400128 93418111 + Cyb5r4 protein_coding retained_intron MGP_CBAJ_T0093026.1 MGP_CBAJ_G0034756.1 mouse_genomes_project 9 93435602 93454733 + MGP_CBAJ_P0093026 Cyb5r4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094591.1 MGP_CBAJ_G0035044.1 mouse_genomes_project 9 124913185 124938056 + MGP_CBAJ_P0094591 Cmtm6 protein_coding protein_coding MGP_CBAJ_T0009172.1 MGP_CBAJ_G0007361.1 mouse_genomes_project 9 82646745 82685442 - 5730403I07Rik lincRNA lincRNA MGP_CBAJ_T0092043.1 MGP_CBAJ_G0034517.1 mouse_genomes_project 9 60059824 60070092 - MGP_CBAJ_P0092043 1700017B05Rik protein_coding protein_coding MGP_CBAJ_T0092716.1 MGP_CBAJ_G0034686.1 mouse_genomes_project 9 79781262 79810912 + MGP_CBAJ_P0092716 Onecut1 protein_coding protein_coding MGP_CBAJ_T0092717.1 MGP_CBAJ_G0034686.1 mouse_genomes_project 9 79785808 79809491 + Onecut1 protein_coding processed_transcript MGP_CBAJ_T0002395.1 MGP_CBAJ_G0002307.1 mouse_genomes_project 9 109198361 109206335 + TEC TEC MGP_CBAJ_T0094798.1 MGP_CBAJ_G0035105.1 mouse_genomes_project 9 132978963 132997688 + MGP_CBAJ_P0094798 Ackr2 protein_coding protein_coding MGP_CBAJ_T0100886.1 MGP_CBAJ_G0039141.1 mouse_genomes_project 9 72771484 72771557 + Gm22962 snoRNA snoRNA MGP_CBAJ_T0092867.1 MGP_CBAJ_G0034730.1 mouse_genomes_project 9 85431763 85458975 - MGP_CBAJ_P0092867 Tmem30a protein_coding protein_coding MGP_CBAJ_T0092868.1 MGP_CBAJ_G0034730.1 mouse_genomes_project 9 85431763 85459052 - MGP_CBAJ_P0092868 Tmem30a protein_coding protein_coding MGP_CBAJ_T0092869.1 MGP_CBAJ_G0034730.1 mouse_genomes_project 9 85435351 85458975 - Tmem30a protein_coding retained_intron MGP_CBAJ_T0092870.1 MGP_CBAJ_G0034730.1 mouse_genomes_project 9 85439653 85458975 - Tmem30a protein_coding retained_intron MGP_CBAJ_T0091918.1 MGP_CBAJ_G0034482.1 mouse_genomes_project 9 57172558 57188494 + MGP_CBAJ_P0091918 Dnaja4 protein_coding protein_coding MGP_CBAJ_T0091919.1 MGP_CBAJ_G0034482.1 mouse_genomes_project 9 57173199 57183066 + MGP_CBAJ_P0091919 Dnaja4 protein_coding protein_coding MGP_CBAJ_T0091920.1 MGP_CBAJ_G0034482.1 mouse_genomes_project 9 57173244 57190044 + MGP_CBAJ_P0091920 Dnaja4 protein_coding protein_coding MGP_CBAJ_T0091410.1 MGP_CBAJ_G0034321.1 mouse_genomes_project 9 41073061 41083295 + Scn3b protein_coding processed_transcript MGP_CBAJ_T0091411.1 MGP_CBAJ_G0034321.1 mouse_genomes_project 9 41073072 41081951 + Scn3b protein_coding retained_intron MGP_CBAJ_T0091412.1 MGP_CBAJ_G0034321.1 mouse_genomes_project 9 41073136 41094665 + MGP_CBAJ_P0091412 Scn3b protein_coding protein_coding MGP_CBAJ_T0091413.1 MGP_CBAJ_G0034321.1 mouse_genomes_project 9 41073221 41081196 + Scn3b protein_coding retained_intron MGP_CBAJ_T0091414.1 MGP_CBAJ_G0034321.1 mouse_genomes_project 9 41073479 41091455 + MGP_CBAJ_P0091414 Scn3b protein_coding protein_coding MGP_CBAJ_T0091636.1 MGP_CBAJ_G0034390.1 mouse_genomes_project 9 46734396 46752062 - MGP_CBAJ_P0091636 Il10ra protein_coding protein_coding MGP_CBAJ_T0091637.1 MGP_CBAJ_G0034390.1 mouse_genomes_project 9 46734399 46752062 - MGP_CBAJ_P0091637 Il10ra protein_coding nonsense_mediated_decay MGP_CBAJ_T0091638.1 MGP_CBAJ_G0034390.1 mouse_genomes_project 9 46735087 46752059 - MGP_CBAJ_P0091638 Il10ra protein_coding protein_coding MGP_CBAJ_T0091942.1 MGP_CBAJ_G0034490.1 mouse_genomes_project 9 57530195 57546418 - MGP_CBAJ_P0091942 Chrna3 protein_coding protein_coding MGP_CBAJ_T0094450.1 MGP_CBAJ_G0035009.1 mouse_genomes_project 9 120404241 120409948 + MGP_CBAJ_P0094450 Prss43 protein_coding protein_coding MGP_CBAJ_T0093034.1 MGP_CBAJ_G0034759.1 mouse_genomes_project 9 94155809 94184304 - MGP_CBAJ_P0093034 Tbx18 protein_coding protein_coding MGP_CBAJ_T0093035.1 MGP_CBAJ_G0034759.1 mouse_genomes_project 9 94177440 94183541 - Tbx18 protein_coding processed_transcript MGP_CBAJ_T0093492.1 MGP_CBAJ_G0034859.1 mouse_genomes_project 9 112523760 112642310 - MGP_CBAJ_P0093492 Dnajc13 protein_coding protein_coding MGP_CBAJ_T0093493.1 MGP_CBAJ_G0034859.1 mouse_genomes_project 9 112524079 112642294 - MGP_CBAJ_P0093493 Dnajc13 protein_coding unknown_likely_coding MGP_CBAJ_T0093494.1 MGP_CBAJ_G0034859.1 mouse_genomes_project 9 112524530 112525972 - Dnajc13 protein_coding retained_intron MGP_CBAJ_T0093495.1 MGP_CBAJ_G0034859.1 mouse_genomes_project 9 112524651 112532100 - Dnajc13 protein_coding processed_transcript MGP_CBAJ_T0093496.1 MGP_CBAJ_G0034859.1 mouse_genomes_project 9 112524745 112532358 - Dnajc13 protein_coding retained_intron MGP_CBAJ_T0093497.1 MGP_CBAJ_G0034859.1 mouse_genomes_project 9 112524795 112626171 - MGP_CBAJ_P0093497 Dnajc13 protein_coding protein_coding MGP_CBAJ_T0093498.1 MGP_CBAJ_G0034859.1 mouse_genomes_project 9 112532089 112538052 - MGP_CBAJ_P0093498 Dnajc13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093499.1 MGP_CBAJ_G0034859.1 mouse_genomes_project 9 112537364 112540320 - MGP_CBAJ_P0093499 Dnajc13 protein_coding protein_coding MGP_CBAJ_T0093500.1 MGP_CBAJ_G0034859.1 mouse_genomes_project 9 112540029 112545556 - Dnajc13 protein_coding retained_intron MGP_CBAJ_T0093501.1 MGP_CBAJ_G0034859.1 mouse_genomes_project 9 112562148 112569352 - Dnajc13 protein_coding retained_intron MGP_CBAJ_T0093502.1 MGP_CBAJ_G0034859.1 mouse_genomes_project 9 112571485 112584060 - MGP_CBAJ_P0093502 Dnajc13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093503.1 MGP_CBAJ_G0034859.1 mouse_genomes_project 9 112574883 112582886 - Dnajc13 protein_coding retained_intron MGP_CBAJ_T0093504.1 MGP_CBAJ_G0034859.1 mouse_genomes_project 9 112578428 112585463 - Dnajc13 protein_coding retained_intron MGP_CBAJ_T0093505.1 MGP_CBAJ_G0034859.1 mouse_genomes_project 9 112603961 112604601 - Dnajc13 protein_coding retained_intron MGP_CBAJ_T0093506.1 MGP_CBAJ_G0034859.1 mouse_genomes_project 9 112613163 112642283 - Dnajc13 protein_coding retained_intron MGP_CBAJ_T0092842.1 MGP_CBAJ_G0034720.1 mouse_genomes_project 9 83856018 83856832 - MGP_CBAJ_P0092842 Dppa5a protein_coding protein_coding MGP_CBAJ_T0091389.1 MGP_CBAJ_G0034302.1 mouse_genomes_project 9 40458791 40459644 + MGP_CBAJ_P0091389 Olfr150 protein_coding protein_coding MGP_CBAJ_T0092827.1 MGP_CBAJ_G0034713.1 mouse_genomes_project 9 83538653 83556132 + MGP_CBAJ_P0092827 Gsta4 protein_coding protein_coding MGP_CBAJ_T0091428.1 MGP_CBAJ_G0034323.1 mouse_genomes_project 9 41522512 41522914 + MGP_CBAJ_P0091428 Gm21915 protein_coding protein_coding MGP_CBAJ_T0092352.1 MGP_CBAJ_G0034604.1 mouse_genomes_project 9 68934780 68986914 + MGP_CBAJ_P0092352 Igdcc3 protein_coding protein_coding MGP_CBAJ_T0092353.1 MGP_CBAJ_G0034604.1 mouse_genomes_project 9 68935041 68986391 + MGP_CBAJ_P0092353 Igdcc3 protein_coding unknown_likely_coding MGP_CBAJ_T0091632.1 MGP_CBAJ_G0034389.1 mouse_genomes_project 9 46655790 46670788 + BC049352 protein_coding lincRNA MGP_CBAJ_T0091633.1 MGP_CBAJ_G0034389.1 mouse_genomes_project 9 46655817 46730569 + BC049352 protein_coding lincRNA MGP_CBAJ_T0091634.1 MGP_CBAJ_G0034389.1 mouse_genomes_project 9 46673585 46730569 + BC049352 protein_coding lincRNA MGP_CBAJ_T0091635.1 MGP_CBAJ_G0034389.1 mouse_genomes_project 9 46673585 46730525 + MGP_CBAJ_P0091635 BC049352 protein_coding protein_coding MGP_CBAJ_T0010941.1 MGP_CBAJ_G0009079.1 mouse_genomes_project 9 55725017 55725099 - Mir130c miRNA miRNA MGP_CBAJ_T0009243.1 MGP_CBAJ_G0007416.1 mouse_genomes_project 9 129663865 129664777 + Gm16295 lincRNA lincRNA MGP_CBAJ_T0015901.1 MGP_CBAJ_G0014013.1 mouse_genomes_project 9 108350608 108350873 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099620.1 MGP_CBAJ_G0037875.1 mouse_genomes_project 9 74993430 74993537 - Gm23730 snRNA snRNA MGP_CBAJ_T0092041.1 MGP_CBAJ_G0034515.1 mouse_genomes_project 9 59937675 59940934 - MGP_CBAJ_P0092041 Commd4 protein_coding protein_coding MGP_CBAJ_T0005370.1 MGP_CBAJ_G0004540.1 mouse_genomes_project 9 59871792 59908980 - Man2c1os antisense antisense MGP_CBAJ_T0005371.1 MGP_CBAJ_G0004540.1 mouse_genomes_project 9 59905793 59908588 - Man2c1os antisense antisense MGP_CBAJ_T0005372.1 MGP_CBAJ_G0004540.1 mouse_genomes_project 9 59907665 59908934 - Man2c1os antisense antisense MGP_CBAJ_T0090799.1 MGP_CBAJ_G0034049.1 mouse_genomes_project 9 17779727 17780666 - MGP_CBAJ_P0090799 Olfr847 protein_coding protein_coding MGP_CBAJ_T0094020.1 MGP_CBAJ_G0034941.1 mouse_genomes_project 9 117237787 117242625 + Amt protein_coding processed_transcript MGP_CBAJ_T0094021.1 MGP_CBAJ_G0034941.1 mouse_genomes_project 9 117237804 117243363 + MGP_CBAJ_P0094021 Amt protein_coding protein_coding MGP_CBAJ_T0094022.1 MGP_CBAJ_G0034941.1 mouse_genomes_project 9 117237833 117238455 + Amt protein_coding retained_intron MGP_CBAJ_T0094023.1 MGP_CBAJ_G0034941.1 mouse_genomes_project 9 117237845 117240536 + Amt protein_coding retained_intron MGP_CBAJ_T0097861.1 MGP_CBAJ_G0036134.1 mouse_genomes_project 9 73115579 73116021 + pseudogene pseudogene MGP_CBAJ_T0005353.1 MGP_CBAJ_G0004530.1 mouse_genomes_project 9 46800741 46804526 - 1700003G13Rik antisense antisense MGP_CBAJ_T0005354.1 MGP_CBAJ_G0004530.1 mouse_genomes_project 9 46800742 46804547 - 1700003G13Rik antisense antisense MGP_CBAJ_T0090699.1 MGP_CBAJ_G0034005.1 mouse_genomes_project 9 12310086 12360955 - MGP_CBAJ_P0090699 Kdm4d protein_coding protein_coding MGP_CBAJ_T0005442.1 MGP_CBAJ_G0004587.1 mouse_genomes_project 9 114903900 114905354 + 4930500F10Rik antisense antisense MGP_CBAJ_T0093377.1 MGP_CBAJ_G0034834.1 mouse_genomes_project 9 109186805 109338063 - MGP_CBAJ_P0093377 Ppp2r3a protein_coding protein_coding MGP_CBAJ_T0093378.1 MGP_CBAJ_G0034834.1 mouse_genomes_project 9 109187007 109281511 - MGP_CBAJ_P0093378 Ppp2r3a protein_coding protein_coding MGP_CBAJ_T0093379.1 MGP_CBAJ_G0034834.1 mouse_genomes_project 9 109189604 109209191 - Ppp2r3a protein_coding processed_transcript MGP_CBAJ_T0093380.1 MGP_CBAJ_G0034834.1 mouse_genomes_project 9 109208310 109281289 - Ppp2r3a protein_coding retained_intron MGP_CBAJ_T0093381.1 MGP_CBAJ_G0034834.1 mouse_genomes_project 9 109275030 109281443 - Ppp2r3a protein_coding retained_intron MGP_CBAJ_T0093382.1 MGP_CBAJ_G0034834.1 mouse_genomes_project 9 109279903 109283246 - Ppp2r3a protein_coding retained_intron MGP_CBAJ_T0093383.1 MGP_CBAJ_G0034834.1 mouse_genomes_project 9 109288890 109294537 - Ppp2r3a protein_coding processed_transcript MGP_CBAJ_T0018332.1 MGP_CBAJ_G0015503.1 mouse_genomes_project 9 127742385 127747327 + processed_transcript processed_transcript MGP_CBAJ_T0091099.1 MGP_CBAJ_G0034168.1 mouse_genomes_project 9 30501838 30525196 - MGP_CBAJ_P0091099 Adamts15 protein_coding protein_coding MGP_CBAJ_T0005328.1 MGP_CBAJ_G0004512.1 mouse_genomes_project 9 4806558 4832742 - AV064505 antisense antisense MGP_CBAJ_T0015898.1 MGP_CBAJ_G0014010.1 mouse_genomes_project 9 105974836 105975413 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009115.1 MGP_CBAJ_G0007315.1 mouse_genomes_project 9 32764468 32788016 - Gm27162 lincRNA lincRNA MGP_CBAJ_T0094139.1 MGP_CBAJ_G0034958.1 mouse_genomes_project 9 117560558 117566976 - MGP_CBAJ_P0094139 Wdr6 protein_coding protein_coding MGP_CBAJ_T0093985.1 MGP_CBAJ_G0034935.1 mouse_genomes_project 9 116949423 116951966 + MGP_CBAJ_P0093985 Amigo3 protein_coding protein_coding MGP_CBAJ_T0090779.1 MGP_CBAJ_G0034032.1 mouse_genomes_project 9 16732545 16735402 + MGP_CBAJ_P0090779 Mbd3l2 protein_coding protein_coding MGP_CBAJ_T0090955.1 MGP_CBAJ_G0034111.1 mouse_genomes_project 9 20335071 20339194 - MGP_CBAJ_P0090955 Yipf2 protein_coding protein_coding MGP_CBAJ_T0090956.1 MGP_CBAJ_G0034111.1 mouse_genomes_project 9 20335071 20339194 - MGP_CBAJ_P0090956 Yipf2 protein_coding protein_coding MGP_CBAJ_T0090957.1 MGP_CBAJ_G0034111.1 mouse_genomes_project 9 20335071 20339194 - MGP_CBAJ_P0090957 Yipf2 protein_coding protein_coding MGP_CBAJ_T0094027.1 MGP_CBAJ_G0034943.1 mouse_genomes_project 9 117247501 117252572 + protein_coding retained_intron MGP_CBAJ_T0094028.1 MGP_CBAJ_G0034943.1 mouse_genomes_project 9 117247891 117271667 + MGP_CBAJ_P0094028 protein_coding protein_coding MGP_CBAJ_T0094007.1 MGP_CBAJ_G0034938.1 mouse_genomes_project 9 116998407 117106355 - MGP_CBAJ_P0094007 Bsn protein_coding protein_coding MGP_CBAJ_T0094008.1 MGP_CBAJ_G0034938.1 mouse_genomes_project 9 116998408 117012680 - MGP_CBAJ_P0094008 Bsn protein_coding protein_coding MGP_CBAJ_T0092038.1 MGP_CBAJ_G0034514.1 mouse_genomes_project 9 59922528 59927862 - MGP_CBAJ_P0092038 Neil1 protein_coding protein_coding MGP_CBAJ_T0092039.1 MGP_CBAJ_G0034514.1 mouse_genomes_project 9 59922798 59928040 - MGP_CBAJ_P0092039 Neil1 protein_coding protein_coding MGP_CBAJ_T0092040.1 MGP_CBAJ_G0034514.1 mouse_genomes_project 9 59922984 59926769 - MGP_CBAJ_P0092040 Neil1 protein_coding protein_coding MGP_CBAJ_T0099586.1 MGP_CBAJ_G0037841.1 mouse_genomes_project 9 6681828 6681890 + Gm22815 snRNA snRNA MGP_CBAJ_T0099598.1 MGP_CBAJ_G0037853.1 mouse_genomes_project 9 42289632 42289738 - Gm25401 snRNA snRNA MGP_CBAJ_T0092746.1 MGP_CBAJ_G0034691.1 mouse_genomes_project 9 80277735 80313872 + MGP_CBAJ_P0092746 Gnb5 protein_coding protein_coding MGP_CBAJ_T0093810.1 MGP_CBAJ_G0034915.1 mouse_genomes_project 9 116438384 116446223 - MGP_CBAJ_P0093810 Sema3b protein_coding nonsense_mediated_decay MGP_CBAJ_T0093811.1 MGP_CBAJ_G0034915.1 mouse_genomes_project 9 116438927 116449931 - MGP_CBAJ_P0093811 Sema3b protein_coding protein_coding MGP_CBAJ_T0093812.1 MGP_CBAJ_G0034915.1 mouse_genomes_project 9 116439063 116449901 - MGP_CBAJ_P0093812 Sema3b protein_coding protein_coding MGP_CBAJ_T0093813.1 MGP_CBAJ_G0034915.1 mouse_genomes_project 9 116439064 116447358 - MGP_CBAJ_P0093813 Sema3b protein_coding protein_coding MGP_CBAJ_T0093814.1 MGP_CBAJ_G0034915.1 mouse_genomes_project 9 116439065 116449895 - MGP_CBAJ_P0093814 Sema3b protein_coding protein_coding MGP_CBAJ_T0093815.1 MGP_CBAJ_G0034915.1 mouse_genomes_project 9 116439065 116446104 - MGP_CBAJ_P0093815 Sema3b protein_coding protein_coding MGP_CBAJ_T0093816.1 MGP_CBAJ_G0034915.1 mouse_genomes_project 9 116440513 116442017 - Sema3b protein_coding retained_intron MGP_CBAJ_T0093817.1 MGP_CBAJ_G0034915.1 mouse_genomes_project 9 116442325 116442877 - Sema3b protein_coding retained_intron MGP_CBAJ_T0093818.1 MGP_CBAJ_G0034915.1 mouse_genomes_project 9 116443859 116445971 - MGP_CBAJ_P0093818 Sema3b protein_coding protein_coding MGP_CBAJ_T0093819.1 MGP_CBAJ_G0034915.1 mouse_genomes_project 9 116444014 116447618 - MGP_CBAJ_P0093819 Sema3b protein_coding protein_coding MGP_CBAJ_T0093820.1 MGP_CBAJ_G0034915.1 mouse_genomes_project 9 116444046 116447385 - MGP_CBAJ_P0093820 Sema3b protein_coding protein_coding MGP_CBAJ_T0093821.1 MGP_CBAJ_G0034915.1 mouse_genomes_project 9 116444876 116447383 - MGP_CBAJ_P0093821 Sema3b protein_coding protein_coding MGP_CBAJ_T0093822.1 MGP_CBAJ_G0034915.1 mouse_genomes_project 9 116445754 116449922 - MGP_CBAJ_P0093822 Sema3b protein_coding protein_coding MGP_CBAJ_T0093823.1 MGP_CBAJ_G0034915.1 mouse_genomes_project 9 116445798 116447887 - Sema3b protein_coding processed_transcript MGP_CBAJ_T0018277.1 MGP_CBAJ_G0015481.1 mouse_genomes_project 9 67650538 67653520 - 1700055C04Rik processed_transcript processed_transcript MGP_CBAJ_T0091304.1 MGP_CBAJ_G0034230.1 mouse_genomes_project 9 38219852 38265577 + MGP_CBAJ_P0091304 protein_coding protein_coding MGP_CBAJ_T0010926.1 MGP_CBAJ_G0009064.1 mouse_genomes_project 9 31823979 31824105 + Gm44453 miRNA miRNA MGP_CBAJ_T0010935.1 MGP_CBAJ_G0009073.1 mouse_genomes_project 9 46749538 46749603 - Mir7086 miRNA miRNA MGP_CBAJ_T0094791.1 MGP_CBAJ_G0035103.1 mouse_genomes_project 9 132860175 132906227 - MGP_CBAJ_P0094791 Ccdc13 protein_coding protein_coding MGP_CBAJ_T0094792.1 MGP_CBAJ_G0035103.1 mouse_genomes_project 9 132860181 132875739 - MGP_CBAJ_P0094792 Ccdc13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094793.1 MGP_CBAJ_G0035103.1 mouse_genomes_project 9 132860700 132875885 - Ccdc13 protein_coding retained_intron MGP_CBAJ_T0094794.1 MGP_CBAJ_G0035103.1 mouse_genomes_project 9 132864147 132875721 - MGP_CBAJ_P0094794 Ccdc13 protein_coding protein_coding MGP_CBAJ_T0094795.1 MGP_CBAJ_G0035103.1 mouse_genomes_project 9 132864658 132875824 - Ccdc13 protein_coding retained_intron MGP_CBAJ_T0094796.1 MGP_CBAJ_G0035103.1 mouse_genomes_project 9 132882979 132896728 - Ccdc13 protein_coding retained_intron MGP_CBAJ_T0010933.1 MGP_CBAJ_G0009071.1 mouse_genomes_project 9 45694990 45695131 - Gm44335 miRNA miRNA MGP_CBAJ_T0093942.1 MGP_CBAJ_G0034929.1 mouse_genomes_project 9 116870793 116872450 - MGP_CBAJ_P0093942 Fam212a protein_coding protein_coding MGP_CBAJ_T0093943.1 MGP_CBAJ_G0034929.1 mouse_genomes_project 9 116871203 116872203 - MGP_CBAJ_P0093943 Fam212a protein_coding protein_coding MGP_CBAJ_T0099593.1 MGP_CBAJ_G0037848.1 mouse_genomes_project 9 21692965 21693050 - Gm27639 snRNA snRNA MGP_CBAJ_T0090632.1 MGP_CBAJ_G0033986.1 mouse_genomes_project 9 5020149 5059992 - MGP_CBAJ_P0090632 Birc3 protein_coding protein_coding MGP_CBAJ_T0090633.1 MGP_CBAJ_G0033986.1 mouse_genomes_project 9 5021144 5041125 - MGP_CBAJ_P0090633 Birc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090634.1 MGP_CBAJ_G0033986.1 mouse_genomes_project 9 5027147 5059951 - MGP_CBAJ_P0090634 Birc3 protein_coding protein_coding MGP_CBAJ_T0090635.1 MGP_CBAJ_G0033986.1 mouse_genomes_project 9 5041589 5060138 - MGP_CBAJ_P0090635 Birc3 protein_coding protein_coding MGP_CBAJ_T0090636.1 MGP_CBAJ_G0033986.1 mouse_genomes_project 9 5041608 5060154 - MGP_CBAJ_P0090636 Birc3 protein_coding protein_coding MGP_CBAJ_T0090637.1 MGP_CBAJ_G0033986.1 mouse_genomes_project 9 5050134 5059825 - Birc3 protein_coding processed_transcript MGP_CBAJ_T0090638.1 MGP_CBAJ_G0033986.1 mouse_genomes_project 9 5052589 5059865 - Birc3 protein_coding processed_transcript MGP_CBAJ_T0015871.1 MGP_CBAJ_G0013983.1 mouse_genomes_project 9 94764345 94765167 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0092841.1 MGP_CBAJ_G0034719.1 mouse_genomes_project 9 83775922 83776125 - MGP_CBAJ_P0092841 protein_coding protein_coding MGP_CBAJ_T0094606.1 MGP_CBAJ_G0035049.1 mouse_genomes_project 9 125516917 125587643 - MGP_CBAJ_P0094606 Stt3b protein_coding protein_coding MGP_CBAJ_T0093542.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113933824 113992754 - MGP_CBAJ_P0093542 Atp2c1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093543.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113933824 114052706 - MGP_CBAJ_P0093543 Atp2c1 protein_coding protein_coding MGP_CBAJ_T0093544.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113933831 114026735 - MGP_CBAJ_P0093544 Atp2c1 protein_coding protein_coding MGP_CBAJ_T0093545.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113939612 114027412 - MGP_CBAJ_P0093545 Atp2c1 protein_coding protein_coding MGP_CBAJ_T0093546.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113939992 114027451 - MGP_CBAJ_P0093546 Atp2c1 protein_coding protein_coding MGP_CBAJ_T0093547.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113939993 114052816 - MGP_CBAJ_P0093547 Atp2c1 protein_coding protein_coding MGP_CBAJ_T0093548.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113941555 113968887 - Atp2c1 protein_coding processed_transcript MGP_CBAJ_T0093549.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113943342 113946527 - Atp2c1 protein_coding retained_intron MGP_CBAJ_T0093550.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113948343 113965039 - Atp2c1 protein_coding retained_intron MGP_CBAJ_T0093551.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113952935 114027395 - MGP_CBAJ_P0093551 Atp2c1 protein_coding protein_coding MGP_CBAJ_T0093552.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113967489 113974427 - Atp2c1 protein_coding retained_intron MGP_CBAJ_T0093553.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113977144 114026777 - Atp2c1 protein_coding processed_transcript MGP_CBAJ_T0093554.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113983372 114002713 - MGP_CBAJ_P0093554 Atp2c1 protein_coding protein_coding MGP_CBAJ_T0093555.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113984342 114027365 - MGP_CBAJ_P0093555 Atp2c1 protein_coding protein_coding MGP_CBAJ_T0093556.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113985006 114027813 - Atp2c1 protein_coding retained_intron MGP_CBAJ_T0093557.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113985062 114026928 - MGP_CBAJ_P0093557 Atp2c1 protein_coding protein_coding MGP_CBAJ_T0093558.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113990808 114058871 - Atp2c1 protein_coding processed_transcript MGP_CBAJ_T0093559.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113990808 114027801 - MGP_CBAJ_P0093559 Atp2c1 protein_coding protein_coding MGP_CBAJ_T0093560.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113992740 114027423 - MGP_CBAJ_P0093560 Atp2c1 protein_coding protein_coding MGP_CBAJ_T0093561.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 113997028 114026982 - MGP_CBAJ_P0093561 Atp2c1 protein_coding protein_coding MGP_CBAJ_T0093562.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 114001450 114027423 - Atp2c1 protein_coding retained_intron MGP_CBAJ_T0093563.1 MGP_CBAJ_G0034867.1 mouse_genomes_project 9 114051561 114052972 - Atp2c1 protein_coding retained_intron MGP_CBAJ_T0010922.1 MGP_CBAJ_G0009060.1 mouse_genomes_project 9 20364004 20364137 - Mir1946b miRNA miRNA MGP_CBAJ_T0093463.1 MGP_CBAJ_G0034852.1 mouse_genomes_project 9 111733530 111789560 - MGP_CBAJ_P0093463 Bfsp2 protein_coding protein_coding MGP_CBAJ_T0093464.1 MGP_CBAJ_G0034852.1 mouse_genomes_project 9 111733534 111761913 - Bfsp2 protein_coding processed_transcript MGP_CBAJ_T0005472.1 MGP_CBAJ_G0004612.1 mouse_genomes_project 9 125460972 125462418 - Gm26962 antisense antisense MGP_CBAJ_T0015830.1 MGP_CBAJ_G0013942.1 mouse_genomes_project 9 76839393 76840009 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0094608.1 MGP_CBAJ_G0035051.1 mouse_genomes_project 9 126443924 126541066 - MGP_CBAJ_P0094608 Tgfbr2 protein_coding protein_coding MGP_CBAJ_T0094609.1 MGP_CBAJ_G0035051.1 mouse_genomes_project 9 126443924 126541066 - MGP_CBAJ_P0094609 Tgfbr2 protein_coding protein_coding MGP_CBAJ_T0015923.1 MGP_CBAJ_G0014035.1 mouse_genomes_project 9 119360222 119360622 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015918.1 MGP_CBAJ_G0014030.1 mouse_genomes_project 9 116018252 116019521 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0092425.1 MGP_CBAJ_G0034627.1 mouse_genomes_project 9 70068912 70088913 + MGP_CBAJ_P0092425 Fam96a protein_coding protein_coding MGP_CBAJ_T0092560.1 MGP_CBAJ_G0034660.1 mouse_genomes_project 9 75316037 75461943 - MGP_CBAJ_P0092560 Lipc protein_coding protein_coding MGP_CBAJ_T0092561.1 MGP_CBAJ_G0034660.1 mouse_genomes_project 9 75316175 75343465 - MGP_CBAJ_P0092561 Lipc protein_coding unknown_likely_coding MGP_CBAJ_T0092562.1 MGP_CBAJ_G0034660.1 mouse_genomes_project 9 75316175 75351566 - MGP_CBAJ_P0092562 Lipc protein_coding unknown_likely_coding MGP_CBAJ_T0092563.1 MGP_CBAJ_G0034660.1 mouse_genomes_project 9 75316175 75343361 - MGP_CBAJ_P0092563 Lipc protein_coding unknown_likely_coding MGP_CBAJ_T0091844.1 MGP_CBAJ_G0034450.1 mouse_genomes_project 9 53180119 53205687 - MGP_CBAJ_P0091844 Layn protein_coding protein_coding MGP_CBAJ_T0092000.1 MGP_CBAJ_G0034506.1 mouse_genomes_project 9 59565798 59569105 - MGP_CBAJ_P0092000 Odf3l1 protein_coding protein_coding MGP_CBAJ_T0094658.1 MGP_CBAJ_G0035061.1 mouse_genomes_project 9 129838298 129860230 - MGP_CBAJ_P0094658 Plcd1 protein_coding protein_coding MGP_CBAJ_T0094437.1 MGP_CBAJ_G0035005.1 mouse_genomes_project 9 120274036 120301731 - MGP_CBAJ_P0094437 Pth1r protein_coding protein_coding MGP_CBAJ_T0094438.1 MGP_CBAJ_G0035005.1 mouse_genomes_project 9 120274039 120298319 - MGP_CBAJ_P0094438 Pth1r protein_coding protein_coding MGP_CBAJ_T0094439.1 MGP_CBAJ_G0035005.1 mouse_genomes_project 9 120274098 120297580 - MGP_CBAJ_P0094439 Pth1r protein_coding protein_coding MGP_CBAJ_T0094440.1 MGP_CBAJ_G0035005.1 mouse_genomes_project 9 120282497 120301665 - MGP_CBAJ_P0094440 Pth1r protein_coding protein_coding MGP_CBAJ_T0094441.1 MGP_CBAJ_G0035005.1 mouse_genomes_project 9 120286658 120301754 - MGP_CBAJ_P0094441 Pth1r protein_coding protein_coding MGP_CBAJ_T0091324.1 MGP_CBAJ_G0034249.1 mouse_genomes_project 9 38894500 38895451 + MGP_CBAJ_P0091324 Olfr898 protein_coding protein_coding MGP_CBAJ_T0093695.1 MGP_CBAJ_G0034895.1 mouse_genomes_project 9 115624425 115684637 + MGP_CBAJ_P0093695 Vprbp protein_coding protein_coding MGP_CBAJ_T0093696.1 MGP_CBAJ_G0034895.1 mouse_genomes_project 9 115631547 115686581 + MGP_CBAJ_P0093696 Vprbp protein_coding protein_coding MGP_CBAJ_T0093698.1 MGP_CBAJ_G0034895.1 mouse_genomes_project 9 115655793 115658522 + Vprbp protein_coding retained_intron MGP_CBAJ_T0093700.1 MGP_CBAJ_G0034895.1 mouse_genomes_project 9 115678915 115684803 + MGP_CBAJ_P0093700 Vprbp protein_coding protein_coding MGP_CBAJ_T0091454.1 MGP_CBAJ_G0034332.1 mouse_genomes_project 9 43423448 43437796 - Tecta protein_coding processed_transcript MGP_CBAJ_T0091455.1 MGP_CBAJ_G0034332.1 mouse_genomes_project 9 43423451 43498314 - MGP_CBAJ_P0091455 Tecta protein_coding protein_coding MGP_CBAJ_T0091456.1 MGP_CBAJ_G0034332.1 mouse_genomes_project 9 43423524 43498112 - MGP_CBAJ_P0091456 Tecta protein_coding protein_coding MGP_CBAJ_T0091350.1 MGP_CBAJ_G0034269.1 mouse_genomes_project 9 39366091 39369348 + MGP_CBAJ_P0091350 Olfr921 protein_coding protein_coding MGP_CBAJ_T0093154.1 MGP_CBAJ_G0034786.1 mouse_genomes_project 9 102777018 102840789 - MGP_CBAJ_P0093154 U2surp protein_coding protein_coding MGP_CBAJ_T0093155.1 MGP_CBAJ_G0034786.1 mouse_genomes_project 9 102781094 102840891 - MGP_CBAJ_P0093155 U2surp protein_coding protein_coding MGP_CBAJ_T0093156.1 MGP_CBAJ_G0034786.1 mouse_genomes_project 9 102781475 102840890 - MGP_CBAJ_P0093156 U2surp protein_coding nonsense_mediated_decay MGP_CBAJ_T0093157.1 MGP_CBAJ_G0034786.1 mouse_genomes_project 9 102800770 102807066 - U2surp protein_coding retained_intron MGP_CBAJ_T0093158.1 MGP_CBAJ_G0034786.1 mouse_genomes_project 9 102815721 102840756 - MGP_CBAJ_P0093158 U2surp protein_coding unknown_likely_coding MGP_CBAJ_T0093159.1 MGP_CBAJ_G0034786.1 mouse_genomes_project 9 102820323 102840754 - MGP_CBAJ_P0093159 U2surp protein_coding protein_coding MGP_CBAJ_T0093160.1 MGP_CBAJ_G0034786.1 mouse_genomes_project 9 102822778 102840751 - MGP_CBAJ_P0093160 U2surp protein_coding protein_coding MGP_CBAJ_T0093161.1 MGP_CBAJ_G0034786.1 mouse_genomes_project 9 102830885 102840780 - U2surp protein_coding retained_intron MGP_CBAJ_T0093162.1 MGP_CBAJ_G0034786.1 mouse_genomes_project 9 102837928 102840774 - U2surp protein_coding retained_intron MGP_CBAJ_T0094043.1 MGP_CBAJ_G0034946.1 mouse_genomes_project 9 117349383 117367244 + MGP_CBAJ_P0094043 1700102P08Rik protein_coding protein_coding MGP_CBAJ_T0094044.1 MGP_CBAJ_G0034946.1 mouse_genomes_project 9 117349412 117354303 + MGP_CBAJ_P0094044 1700102P08Rik protein_coding protein_coding MGP_CBAJ_T0005461.1 MGP_CBAJ_G0004601.1 mouse_genomes_project 9 116884749 116889033 - 4930535L15Rik antisense antisense MGP_CBAJ_T0092874.1 MGP_CBAJ_G0034732.1 mouse_genomes_project 9 85767390 85798192 + Senp6 protein_coding retained_intron MGP_CBAJ_T0092875.1 MGP_CBAJ_G0034732.1 mouse_genomes_project 9 85767390 85855380 + MGP_CBAJ_P0092875 Senp6 protein_coding protein_coding MGP_CBAJ_T0092876.1 MGP_CBAJ_G0034732.1 mouse_genomes_project 9 85767423 85822415 + MGP_CBAJ_P0092876 Senp6 protein_coding protein_coding MGP_CBAJ_T0092877.1 MGP_CBAJ_G0034732.1 mouse_genomes_project 9 85767586 85855208 + MGP_CBAJ_P0092877 Senp6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092878.1 MGP_CBAJ_G0034732.1 mouse_genomes_project 9 85768011 85854289 + MGP_CBAJ_P0092878 Senp6 protein_coding protein_coding MGP_CBAJ_T0092879.1 MGP_CBAJ_G0034732.1 mouse_genomes_project 9 85768304 85790313 + Senp6 protein_coding processed_transcript MGP_CBAJ_T0092880.1 MGP_CBAJ_G0034732.1 mouse_genomes_project 9 85796003 85830003 + MGP_CBAJ_P0092880 Senp6 protein_coding protein_coding MGP_CBAJ_T0092881.1 MGP_CBAJ_G0034732.1 mouse_genomes_project 9 85806899 85854139 + MGP_CBAJ_P0092881 Senp6 protein_coding protein_coding MGP_CBAJ_T0092882.1 MGP_CBAJ_G0034732.1 mouse_genomes_project 9 85822683 85827408 + MGP_CBAJ_P0092882 Senp6 protein_coding protein_coding MGP_CBAJ_T0092883.1 MGP_CBAJ_G0034732.1 mouse_genomes_project 9 85822700 85830075 + Senp6 protein_coding processed_transcript MGP_CBAJ_T0092884.1 MGP_CBAJ_G0034732.1 mouse_genomes_project 9 85831819 85844543 + MGP_CBAJ_P0092884 Senp6 protein_coding protein_coding MGP_CBAJ_T0092885.1 MGP_CBAJ_G0034732.1 mouse_genomes_project 9 85844343 85854598 + Senp6 protein_coding retained_intron MGP_CBAJ_T0092886.1 MGP_CBAJ_G0034732.1 mouse_genomes_project 9 85847005 85854136 + Senp6 protein_coding retained_intron MGP_CBAJ_T0092887.1 MGP_CBAJ_G0034732.1 mouse_genomes_project 9 85852472 85854432 + Senp6 protein_coding retained_intron MGP_CBAJ_T0011620.1 MGP_CBAJ_G0009758.1 mouse_genomes_project 9 119565236 119565364 - Gm27855 misc_RNA misc_RNA MGP_CBAJ_T0091313.1 MGP_CBAJ_G0034238.1 mouse_genomes_project 9 38546200 38547130 + MGP_CBAJ_P0091313 Olfr885 protein_coding protein_coding MGP_CBAJ_T0090617.1 MGP_CBAJ_G0033979.1 mouse_genomes_project 9 4630331 4637909 + MGP_CBAJ_P0090617 Mmp10 protein_coding protein_coding MGP_CBAJ_T0009217.1 MGP_CBAJ_G0007397.1 mouse_genomes_project 9 111006096 111006356 - Gm28621 lincRNA lincRNA MGP_CBAJ_T0091100.1 MGP_CBAJ_G0034169.1 mouse_genomes_project 9 30546823 30571184 + MGP_CBAJ_P0091100 Adamts8 protein_coding protein_coding MGP_CBAJ_T0091101.1 MGP_CBAJ_G0034169.1 mouse_genomes_project 9 30547719 30572168 + MGP_CBAJ_P0091101 Adamts8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0015857.1 MGP_CBAJ_G0013969.1 mouse_genomes_project 9 88477064 88477393 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0091361.1 MGP_CBAJ_G0034280.1 mouse_genomes_project 9 39675347 39676283 - MGP_CBAJ_P0091361 Olfr937 protein_coding protein_coding MGP_CBAJ_T0090788.1 MGP_CBAJ_G0034038.1 mouse_genomes_project 9 17211732 17212698 + MGP_CBAJ_P0090788 Olfr829 protein_coding protein_coding MGP_CBAJ_T0005385.1 MGP_CBAJ_G0004548.1 mouse_genomes_project 9 70878829 70879665 + Gm17098 antisense antisense MGP_CBAJ_T0094224.1 MGP_CBAJ_G0034970.1 mouse_genomes_project 9 117977899 117979054 + MGP_CBAJ_P0094224 Ucn2 protein_coding protein_coding MGP_CBAJ_T0002381.1 MGP_CBAJ_G0002293.1 mouse_genomes_project 9 103661042 103664620 + TEC TEC MGP_CBAJ_T0010908.1 MGP_CBAJ_G0009046.1 mouse_genomes_project 9 1220228 1220312 - Gm23811 miRNA miRNA MGP_CBAJ_T0009241.1 MGP_CBAJ_G0007414.1 mouse_genomes_project 9 128756032 128778978 + Gm17399 lincRNA lincRNA MGP_CBAJ_T0098473.1 MGP_CBAJ_G0036733.1 mouse_genomes_project 9 58892171 58893646 - Gm29322 sense_intronic sense_intronic MGP_CBAJ_T0092367.1 MGP_CBAJ_G0034613.1 mouse_genomes_project 9 69294299 69314457 + MGP_CBAJ_P0092367 Mtfmt protein_coding protein_coding MGP_CBAJ_T0092368.1 MGP_CBAJ_G0034613.1 mouse_genomes_project 9 69294305 69313820 + Mtfmt protein_coding retained_intron MGP_CBAJ_T0092369.1 MGP_CBAJ_G0034613.1 mouse_genomes_project 9 69295542 69308683 + Mtfmt protein_coding processed_transcript MGP_CBAJ_T0092370.1 MGP_CBAJ_G0034613.1 mouse_genomes_project 9 69304946 69313528 + Mtfmt protein_coding retained_intron MGP_CBAJ_T0092389.1 MGP_CBAJ_G0034620.1 mouse_genomes_project 9 69600905 69749575 - MGP_CBAJ_P0092389 Zfp609 protein_coding protein_coding MGP_CBAJ_T0092390.1 MGP_CBAJ_G0034620.1 mouse_genomes_project 9 69608384 69609659 - Zfp609 protein_coding processed_transcript MGP_CBAJ_T0092391.1 MGP_CBAJ_G0034620.1 mouse_genomes_project 9 69708380 69710871 - MGP_CBAJ_P0092391 Zfp609 protein_coding protein_coding MGP_CBAJ_T0091213.1 MGP_CBAJ_G0034202.1 mouse_genomes_project 9 36261373 36269832 - MGP_CBAJ_P0091213 Gm5916 protein_coding protein_coding MGP_CBAJ_T0099642.1 MGP_CBAJ_G0037897.1 mouse_genomes_project 9 116777801 116777900 + Gm23856 snRNA snRNA MGP_CBAJ_T0093073.1 MGP_CBAJ_G0034767.1 mouse_genomes_project 9 96249754 96285556 - MGP_CBAJ_P0093073 AF529169 protein_coding protein_coding MGP_CBAJ_T0093074.1 MGP_CBAJ_G0034767.1 mouse_genomes_project 9 96253624 96265838 - MGP_CBAJ_P0093074 AF529169 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091639.1 MGP_CBAJ_G0034391.1 mouse_genomes_project 9 46801575 46835714 + MGP_CBAJ_P0091639 Tmprss13 protein_coding protein_coding MGP_CBAJ_T0091848.1 MGP_CBAJ_G0034454.1 mouse_genomes_project 9 53419139 53427140 - MGP_CBAJ_P0091848 Gm684 protein_coding unknown_likely_coding MGP_CBAJ_T0091256.1 MGP_CBAJ_G0034214.1 mouse_genomes_project 9 37201257 37424088 - MGP_CBAJ_P0091256 Pknox2 protein_coding protein_coding MGP_CBAJ_T0091257.1 MGP_CBAJ_G0034214.1 mouse_genomes_project 9 37201257 37503242 - MGP_CBAJ_P0091257 Pknox2 protein_coding protein_coding MGP_CBAJ_T0091258.1 MGP_CBAJ_G0034214.1 mouse_genomes_project 9 37201260 37503267 - MGP_CBAJ_P0091258 Pknox2 protein_coding protein_coding MGP_CBAJ_T0091259.1 MGP_CBAJ_G0034214.1 mouse_genomes_project 9 37202753 37284340 - MGP_CBAJ_P0091259 Pknox2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091260.1 MGP_CBAJ_G0034214.1 mouse_genomes_project 9 37202917 37424058 - Pknox2 protein_coding processed_transcript MGP_CBAJ_T0091261.1 MGP_CBAJ_G0034214.1 mouse_genomes_project 9 37234511 37424058 - Pknox2 protein_coding retained_intron MGP_CBAJ_T0091262.1 MGP_CBAJ_G0034214.1 mouse_genomes_project 9 37250486 37424058 - Pknox2 protein_coding retained_intron MGP_CBAJ_T0091263.1 MGP_CBAJ_G0034214.1 mouse_genomes_project 9 37252258 37424058 - MGP_CBAJ_P0091263 Pknox2 protein_coding protein_coding MGP_CBAJ_T0091264.1 MGP_CBAJ_G0034214.1 mouse_genomes_project 9 37252271 37490952 - MGP_CBAJ_P0091264 Pknox2 protein_coding protein_coding MGP_CBAJ_T0091265.1 MGP_CBAJ_G0034214.1 mouse_genomes_project 9 37252287 37503275 - MGP_CBAJ_P0091265 Pknox2 protein_coding protein_coding MGP_CBAJ_T0091266.1 MGP_CBAJ_G0034214.1 mouse_genomes_project 9 37270587 37501602 - MGP_CBAJ_P0091266 Pknox2 protein_coding protein_coding MGP_CBAJ_T0091267.1 MGP_CBAJ_G0034214.1 mouse_genomes_project 9 37312642 37503219 - Pknox2 protein_coding processed_transcript MGP_CBAJ_T0090920.1 MGP_CBAJ_G0034104.1 mouse_genomes_project 9 19992280 20036579 + MGP_CBAJ_P0090920 Slc44a2 protein_coding unknown_likely_coding MGP_CBAJ_T0090921.1 MGP_CBAJ_G0034104.1 mouse_genomes_project 9 20019379 20036572 + MGP_CBAJ_P0090921 Slc44a2 protein_coding protein_coding MGP_CBAJ_T0091478.1 MGP_CBAJ_G0034344.1 mouse_genomes_project 9 45373843 45428318 - MGP_CBAJ_P0091478 Rnf26 protein_coding protein_coding MGP_CBAJ_T0091488.1 MGP_CBAJ_G0034344.1 mouse_genomes_project 9 45406179 45413421 - Rnf26 protein_coding processed_transcript MGP_CBAJ_T0010979.1 MGP_CBAJ_G0009117.1 mouse_genomes_project 9 125707452 125707569 - Gm22243 miRNA miRNA MGP_CBAJ_T0010959.1 MGP_CBAJ_G0009097.1 mouse_genomes_project 9 102012367 102012429 + Mir7656 miRNA miRNA MGP_CBAJ_T0092317.1 MGP_CBAJ_G0034595.1 mouse_genomes_project 9 67970574 68016792 - MGP_CBAJ_P0092317 Dis3l protein_coding protein_coding MGP_CBAJ_T0092318.1 MGP_CBAJ_G0034595.1 mouse_genomes_project 9 67970575 68016823 - MGP_CBAJ_P0092318 Dis3l protein_coding protein_coding MGP_CBAJ_T0092319.1 MGP_CBAJ_G0034595.1 mouse_genomes_project 9 67970807 68016702 - MGP_CBAJ_P0092319 Dis3l protein_coding protein_coding MGP_CBAJ_T0092320.1 MGP_CBAJ_G0034595.1 mouse_genomes_project 9 67970807 68016006 - MGP_CBAJ_P0092320 Dis3l protein_coding protein_coding MGP_CBAJ_T0092321.1 MGP_CBAJ_G0034595.1 mouse_genomes_project 9 67992122 68016705 - Dis3l protein_coding retained_intron MGP_CBAJ_T0092322.1 MGP_CBAJ_G0034595.1 mouse_genomes_project 9 68000092 68008135 - MGP_CBAJ_P0092322 Dis3l protein_coding protein_coding MGP_CBAJ_T0092323.1 MGP_CBAJ_G0034595.1 mouse_genomes_project 9 68008170 68016312 - Dis3l protein_coding processed_transcript MGP_CBAJ_T0092324.1 MGP_CBAJ_G0034595.1 mouse_genomes_project 9 68014986 68016792 - Dis3l protein_coding retained_intron MGP_CBAJ_T0002310.1 MGP_CBAJ_G0002223.1 mouse_genomes_project 9 29525384 29584209 - TEC TEC MGP_CBAJ_T0002341.1 MGP_CBAJ_G0002254.1 mouse_genomes_project 9 77435577 77439528 + TEC TEC MGP_CBAJ_T0100913.1 MGP_CBAJ_G0039168.1 mouse_genomes_project 9 119577564 119577690 - Gm23377 snoRNA snoRNA MGP_CBAJ_T0015887.1 MGP_CBAJ_G0013999.1 mouse_genomes_project 9 102724141 102725131 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099629.1 MGP_CBAJ_G0037884.1 mouse_genomes_project 9 90349817 90350002 + Gm26146 snRNA snRNA MGP_CBAJ_T0015847.1 MGP_CBAJ_G0013959.1 mouse_genomes_project 9 82209015 82209253 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0091010.1 MGP_CBAJ_G0034140.1 mouse_genomes_project 9 21304203 21339578 + MGP_CBAJ_P0091010 9530077C05Rik protein_coding protein_coding MGP_CBAJ_T0094033.1 MGP_CBAJ_G0034945.1 mouse_genomes_project 9 117292289 117349124 + MGP_CBAJ_P0094033 Usp4 protein_coding protein_coding MGP_CBAJ_T0094034.1 MGP_CBAJ_G0034945.1 mouse_genomes_project 9 117292310 117342474 + MGP_CBAJ_P0094034 Usp4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094035.1 MGP_CBAJ_G0034945.1 mouse_genomes_project 9 117292333 117305374 + Usp4 protein_coding retained_intron MGP_CBAJ_T0094036.1 MGP_CBAJ_G0034945.1 mouse_genomes_project 9 117292349 117349099 + MGP_CBAJ_P0094036 Usp4 protein_coding protein_coding MGP_CBAJ_T0094037.1 MGP_CBAJ_G0034945.1 mouse_genomes_project 9 117303994 117305489 + Usp4 protein_coding processed_transcript MGP_CBAJ_T0094038.1 MGP_CBAJ_G0034945.1 mouse_genomes_project 9 117309335 117312336 + Usp4 protein_coding retained_intron MGP_CBAJ_T0094039.1 MGP_CBAJ_G0034945.1 mouse_genomes_project 9 117317409 117322640 + Usp4 protein_coding retained_intron MGP_CBAJ_T0094040.1 MGP_CBAJ_G0034945.1 mouse_genomes_project 9 117325091 117348838 + MGP_CBAJ_P0094040 Usp4 protein_coding protein_coding MGP_CBAJ_T0094041.1 MGP_CBAJ_G0034945.1 mouse_genomes_project 9 117337006 117348371 + MGP_CBAJ_P0094041 Usp4 protein_coding protein_coding MGP_CBAJ_T0094042.1 MGP_CBAJ_G0034945.1 mouse_genomes_project 9 117347457 117348824 + Usp4 protein_coding retained_intron MGP_CBAJ_T0091376.1 MGP_CBAJ_G0034295.1 mouse_genomes_project 9 40286649 40305180 - MGP_CBAJ_P0091376 AW551984 protein_coding protein_coding MGP_CBAJ_T0091377.1 MGP_CBAJ_G0034295.1 mouse_genomes_project 9 40286763 40304738 - MGP_CBAJ_P0091377 AW551984 protein_coding protein_coding MGP_CBAJ_T0091378.1 MGP_CBAJ_G0034295.1 mouse_genomes_project 9 40288215 40290274 - AW551984 protein_coding retained_intron MGP_CBAJ_T0091379.1 MGP_CBAJ_G0034295.1 mouse_genomes_project 9 40289879 40291515 - AW551984 protein_coding retained_intron MGP_CBAJ_T0091380.1 MGP_CBAJ_G0034295.1 mouse_genomes_project 9 40300708 40305485 - MGP_CBAJ_P0091380 AW551984 protein_coding protein_coding MGP_CBAJ_T0091381.1 MGP_CBAJ_G0034295.1 mouse_genomes_project 9 40301345 40304678 - AW551984 protein_coding retained_intron MGP_CBAJ_T0091382.1 MGP_CBAJ_G0034295.1 mouse_genomes_project 9 40301605 40304430 - MGP_CBAJ_P0091382 AW551984 protein_coding protein_coding MGP_CBAJ_T0010940.1 MGP_CBAJ_G0009078.1 mouse_genomes_project 9 54323423 54323540 + Mir6244 miRNA miRNA MGP_CBAJ_T0002376.1 MGP_CBAJ_G0002288.1 mouse_genomes_project 9 98230454 98231342 - TEC TEC MGP_CBAJ_T0093284.1 MGP_CBAJ_G0034813.1 mouse_genomes_project 9 106622059 106623563 + MGP_CBAJ_P0093284 7420426K07Rik protein_coding protein_coding MGP_CBAJ_T0094451.1 MGP_CBAJ_G0035010.1 mouse_genomes_project 9 120412645 120419334 + MGP_CBAJ_P0094451 Prss45 protein_coding protein_coding MGP_CBAJ_T0094452.1 MGP_CBAJ_G0035010.1 mouse_genomes_project 9 120412645 120419331 + MGP_CBAJ_P0094452 Prss45 protein_coding protein_coding MGP_CBAJ_T0010962.1 MGP_CBAJ_G0009100.1 mouse_genomes_project 9 113487688 113487792 + Gm23391 miRNA miRNA MGP_CBAJ_T0090652.1 MGP_CBAJ_G0033991.1 mouse_genomes_project 9 5816266 5955030 + MGP_CBAJ_P0090652 Trpc6 protein_coding unknown_likely_coding MGP_CBAJ_T0094852.1 MGP_CBAJ_G0035125.1 mouse_genomes_project 9 134372152 134378618 + MGP_CBAJ_P0094852 Clec3b protein_coding protein_coding MGP_CBAJ_T0005459.1 MGP_CBAJ_G0004599.1 mouse_genomes_project 9 116813410 116814910 - Gm37974 antisense antisense MGP_CBAJ_T0009104.1 MGP_CBAJ_G0007304.1 mouse_genomes_project 9 18988962 19139277 + lincRNA lincRNA MGP_CBAJ_T0094016.1 MGP_CBAJ_G0034940.1 mouse_genomes_project 9 117229255 117237433 + MGP_CBAJ_P0094016 Nicn1 protein_coding protein_coding MGP_CBAJ_T0094017.1 MGP_CBAJ_G0034940.1 mouse_genomes_project 9 117229270 117234448 + Nicn1 protein_coding retained_intron MGP_CBAJ_T0094018.1 MGP_CBAJ_G0034940.1 mouse_genomes_project 9 117229281 117234416 + Nicn1 protein_coding processed_transcript MGP_CBAJ_T0094019.1 MGP_CBAJ_G0034940.1 mouse_genomes_project 9 117234763 117235691 + Nicn1 protein_coding retained_intron MGP_CBAJ_T0092834.1 MGP_CBAJ_G0034718.1 mouse_genomes_project 9 83769272 83771270 + MGP_CBAJ_P0092834 protein_coding protein_coding MGP_CBAJ_T0092835.1 MGP_CBAJ_G0034718.1 mouse_genomes_project 9 83769705 83771294 + MGP_CBAJ_P0092835 protein_coding protein_coding MGP_CBAJ_T0092836.1 MGP_CBAJ_G0034718.1 mouse_genomes_project 9 83769729 83770771 + protein_coding retained_intron MGP_CBAJ_T0092837.1 MGP_CBAJ_G0034718.1 mouse_genomes_project 9 83769729 83770238 + MGP_CBAJ_P0092837 protein_coding protein_coding MGP_CBAJ_T0092839.1 MGP_CBAJ_G0034718.1 mouse_genomes_project 9 83769855 83771118 + MGP_CBAJ_P0092839 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091330.1 MGP_CBAJ_G0034255.1 mouse_genomes_project 9 39031952 39032885 + MGP_CBAJ_P0091330 Olfr904 protein_coding protein_coding MGP_CBAJ_T0091327.1 MGP_CBAJ_G0034252.1 mouse_genomes_project 9 38962299 38964408 + MGP_CBAJ_P0091327 Olfr147 protein_coding protein_coding MGP_CBAJ_T0002412.1 MGP_CBAJ_G0002324.1 mouse_genomes_project 9 112684966 112687941 - TEC TEC MGP_CBAJ_T0093507.1 MGP_CBAJ_G0034860.1 mouse_genomes_project 9 112671342 112730093 - MGP_CBAJ_P0093507 Acpp protein_coding protein_coding MGP_CBAJ_T0093508.1 MGP_CBAJ_G0034860.1 mouse_genomes_project 9 112674079 112684264 - Acpp protein_coding processed_transcript MGP_CBAJ_T0093509.1 MGP_CBAJ_G0034860.1 mouse_genomes_project 9 112682038 112730072 - MGP_CBAJ_P0093509 Acpp protein_coding protein_coding MGP_CBAJ_T0093510.1 MGP_CBAJ_G0034860.1 mouse_genomes_project 9 112689709 112730047 - Acpp protein_coding retained_intron MGP_CBAJ_T0093511.1 MGP_CBAJ_G0034860.1 mouse_genomes_project 9 112711379 112730072 - Acpp protein_coding retained_intron MGP_CBAJ_T0091310.1 MGP_CBAJ_G0034236.1 mouse_genomes_project 9 38508191 38509121 + MGP_CBAJ_P0091310 Olfr883 protein_coding protein_coding MGP_CBAJ_T0100904.1 MGP_CBAJ_G0039159.1 mouse_genomes_project 9 109307862 109307989 + Gm24338 snoRNA snoRNA MGP_CBAJ_T0010981.1 MGP_CBAJ_G0009119.1 mouse_genomes_project 9 129789255 129789345 + Mir26a-1 miRNA miRNA MGP_CBAJ_T0100865.1 MGP_CBAJ_G0039120.1 mouse_genomes_project 9 37532618 37532733 - Gm25273 snoRNA snoRNA MGP_CBAJ_T0092949.1 MGP_CBAJ_G0034742.1 mouse_genomes_project 9 89892869 89923395 - MGP_CBAJ_P0092949 Elovl4 protein_coding protein_coding MGP_CBAJ_T0092950.1 MGP_CBAJ_G0034742.1 mouse_genomes_project 9 89894840 89923420 - MGP_CBAJ_P0092950 Elovl4 protein_coding protein_coding MGP_CBAJ_T0094762.1 MGP_CBAJ_G0035096.1 mouse_genomes_project 9 132686219 132719189 + MGP_CBAJ_P0094762 Vipr1 protein_coding protein_coding MGP_CBAJ_T0094763.1 MGP_CBAJ_G0035096.1 mouse_genomes_project 9 132686555 132706425 + Vipr1 protein_coding processed_transcript MGP_CBAJ_T0094764.1 MGP_CBAJ_G0035096.1 mouse_genomes_project 9 132710799 132712092 + Vipr1 protein_coding retained_intron MGP_CBAJ_T0094765.1 MGP_CBAJ_G0035096.1 mouse_genomes_project 9 132714942 132715746 + Vipr1 protein_coding retained_intron MGP_CBAJ_T0091747.1 MGP_CBAJ_G0034425.1 mouse_genomes_project 9 51223727 51233939 + MGP_CBAJ_P0091747 Gm4894 protein_coding protein_coding MGP_CBAJ_T0100906.1 MGP_CBAJ_G0039161.1 mouse_genomes_project 9 111281277 111281407 - Gm22595 snoRNA snoRNA MGP_CBAJ_T0091965.1 MGP_CBAJ_G0034495.1 mouse_genomes_project 9 57887332 58002760 + Tmem266 protein_coding processed_transcript MGP_CBAJ_T0091966.1 MGP_CBAJ_G0034495.1 mouse_genomes_project 9 57939360 58003747 + MGP_CBAJ_P0091966 Tmem266 protein_coding protein_coding MGP_CBAJ_T0091967.1 MGP_CBAJ_G0034495.1 mouse_genomes_project 9 57939360 58003747 + MGP_CBAJ_P0091967 Tmem266 protein_coding protein_coding MGP_CBAJ_T0015921.1 MGP_CBAJ_G0014033.1 mouse_genomes_project 9 117540067 117549427 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0090821.1 MGP_CBAJ_G0034071.1 mouse_genomes_project 9 18883974 18925001 - MGP_CBAJ_P0090821 Zfp560 protein_coding protein_coding MGP_CBAJ_T0090822.1 MGP_CBAJ_G0034071.1 mouse_genomes_project 9 18892159 18925001 - Zfp560 protein_coding retained_intron MGP_CBAJ_T0005373.1 MGP_CBAJ_G0004541.1 mouse_genomes_project 9 60638851 60698972 + antisense antisense MGP_CBAJ_T0005374.1 MGP_CBAJ_G0004541.1 mouse_genomes_project 9 60690959 60699309 + antisense antisense MGP_CBAJ_T0005375.1 MGP_CBAJ_G0004541.1 mouse_genomes_project 9 60692357 60699214 + antisense antisense MGP_CBAJ_T0005379.1 MGP_CBAJ_G0004545.1 mouse_genomes_project 9 70414984 70417880 - Gm28379 antisense antisense MGP_CBAJ_T0005380.1 MGP_CBAJ_G0004545.1 mouse_genomes_project 9 70415541 70445668 - Gm28379 antisense antisense MGP_CBAJ_T0098123.1 MGP_CBAJ_G0036396.1 mouse_genomes_project 9 110314441 110314559 + n-R5s88 rRNA rRNA MGP_CBAJ_T0093768.1 MGP_CBAJ_G0034908.1 mouse_genomes_project 9 116391612 116403105 + MGP_CBAJ_P0093768 Rassf1 protein_coding protein_coding MGP_CBAJ_T0093769.1 MGP_CBAJ_G0034908.1 mouse_genomes_project 9 116391619 116394564 + Rassf1 protein_coding retained_intron MGP_CBAJ_T0093770.1 MGP_CBAJ_G0034908.1 mouse_genomes_project 9 116391624 116403101 + MGP_CBAJ_P0093770 Rassf1 protein_coding protein_coding MGP_CBAJ_T0093771.1 MGP_CBAJ_G0034908.1 mouse_genomes_project 9 116391647 116403101 + MGP_CBAJ_P0093771 Rassf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093772.1 MGP_CBAJ_G0034908.1 mouse_genomes_project 9 116394640 116403101 + MGP_CBAJ_P0093772 Rassf1 protein_coding protein_coding MGP_CBAJ_T0093773.1 MGP_CBAJ_G0034908.1 mouse_genomes_project 9 116396213 116398638 + Rassf1 protein_coding processed_transcript MGP_CBAJ_T0093774.1 MGP_CBAJ_G0034908.1 mouse_genomes_project 9 116397448 116403101 + Rassf1 protein_coding processed_transcript MGP_CBAJ_T0093775.1 MGP_CBAJ_G0034908.1 mouse_genomes_project 9 116397580 116403101 + Rassf1 protein_coding retained_intron MGP_CBAJ_T0093776.1 MGP_CBAJ_G0034908.1 mouse_genomes_project 9 116398772 116402676 + Rassf1 protein_coding retained_intron MGP_CBAJ_T0093777.1 MGP_CBAJ_G0034908.1 mouse_genomes_project 9 116398779 116401273 + Rassf1 protein_coding retained_intron MGP_CBAJ_T0018308.1 MGP_CBAJ_G0015494.1 mouse_genomes_project 9 106256657 106258021 - 4930579K19Rik processed_transcript lincRNA MGP_CBAJ_T0018309.1 MGP_CBAJ_G0015494.1 mouse_genomes_project 9 106256888 106258040 - 4930579K19Rik processed_transcript TEC MGP_CBAJ_T0018310.1 MGP_CBAJ_G0015494.1 mouse_genomes_project 9 106257388 106258040 - 4930579K19Rik processed_transcript processed_transcript MGP_CBAJ_T0094446.1 MGP_CBAJ_G0035008.1 mouse_genomes_project 9 120388084 120392083 + MGP_CBAJ_P0094446 Prss44 protein_coding protein_coding MGP_CBAJ_T0094447.1 MGP_CBAJ_G0035008.1 mouse_genomes_project 9 120388117 120402080 + MGP_CBAJ_P0094447 Prss44 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094448.1 MGP_CBAJ_G0035008.1 mouse_genomes_project 9 120388541 120390618 + MGP_CBAJ_P0094448 Prss44 protein_coding protein_coding MGP_CBAJ_T0094449.1 MGP_CBAJ_G0035008.1 mouse_genomes_project 9 120389306 120391032 + Prss44 protein_coding retained_intron MGP_CBAJ_T0015917.1 MGP_CBAJ_G0014029.1 mouse_genomes_project 9 115937297 115937588 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009232.1 MGP_CBAJ_G0007408.1 mouse_genomes_project 9 119778691 119783657 - Gm42775 lincRNA lincRNA MGP_CBAJ_T0091396.1 MGP_CBAJ_G0034309.1 mouse_genomes_project 9 40679496 40680576 + MGP_CBAJ_P0091396 Olfr974 protein_coding protein_coding MGP_CBAJ_T0009182.1 MGP_CBAJ_G0007369.1 mouse_genomes_project 9 89794658 89796359 + Gm2109 lincRNA lincRNA MGP_CBAJ_T0091248.1 MGP_CBAJ_G0034213.1 mouse_genomes_project 9 37114750 37152087 + MGP_CBAJ_P0091248 Fez1 protein_coding protein_coding MGP_CBAJ_T0091249.1 MGP_CBAJ_G0034213.1 mouse_genomes_project 9 37129189 37183403 + MGP_CBAJ_P0091249 Fez1 protein_coding protein_coding MGP_CBAJ_T0091250.1 MGP_CBAJ_G0034213.1 mouse_genomes_project 9 37130136 37166605 + MGP_CBAJ_P0091250 Fez1 protein_coding protein_coding MGP_CBAJ_T0091251.1 MGP_CBAJ_G0034213.1 mouse_genomes_project 9 37142610 37183119 + MGP_CBAJ_P0091251 Fez1 protein_coding protein_coding MGP_CBAJ_T0091252.1 MGP_CBAJ_G0034213.1 mouse_genomes_project 9 37142729 37172267 + MGP_CBAJ_P0091252 Fez1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091253.1 MGP_CBAJ_G0034213.1 mouse_genomes_project 9 37173364 37175252 + MGP_CBAJ_P0091253 Fez1 protein_coding protein_coding MGP_CBAJ_T0091254.1 MGP_CBAJ_G0034213.1 mouse_genomes_project 9 37174589 37183279 + Fez1 protein_coding retained_intron MGP_CBAJ_T0091255.1 MGP_CBAJ_G0034213.1 mouse_genomes_project 9 37174989 37183399 + MGP_CBAJ_P0091255 Fez1 protein_coding protein_coding MGP_CBAJ_T0090739.1 MGP_CBAJ_G0034020.1 mouse_genomes_project 9 13280180 13286081 + MGP_CBAJ_P0090739 Taf1d protein_coding protein_coding MGP_CBAJ_T0090740.1 MGP_CBAJ_G0034020.1 mouse_genomes_project 9 13280180 13286081 + MGP_CBAJ_P0090740 Taf1d protein_coding protein_coding MGP_CBAJ_T0015803.1 MGP_CBAJ_G0013915.1 mouse_genomes_project 9 35660070 35660359 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009197.1 MGP_CBAJ_G0007381.1 mouse_genomes_project 9 100025121 100066600 - lincRNA lincRNA MGP_CBAJ_T0009198.1 MGP_CBAJ_G0007381.1 mouse_genomes_project 9 100025121 100044732 - lincRNA lincRNA MGP_CBAJ_T0009199.1 MGP_CBAJ_G0007381.1 mouse_genomes_project 9 100025202 100066606 - lincRNA lincRNA MGP_CBAJ_T0009200.1 MGP_CBAJ_G0007381.1 mouse_genomes_project 9 100056803 100066597 - lincRNA lincRNA MGP_CBAJ_T0091644.1 MGP_CBAJ_G0034395.1 mouse_genomes_project 9 47307481 47371060 - MGP_CBAJ_P0091644 Cep164 protein_coding protein_coding MGP_CBAJ_T0091645.1 MGP_CBAJ_G0034395.1 mouse_genomes_project 9 47308793 47370928 - MGP_CBAJ_P0091645 Cep164 protein_coding unknown_likely_coding MGP_CBAJ_T0091646.1 MGP_CBAJ_G0034395.1 mouse_genomes_project 9 47311283 47313067 - Cep164 protein_coding retained_intron MGP_CBAJ_T0091647.1 MGP_CBAJ_G0034395.1 mouse_genomes_project 9 47318793 47343000 - MGP_CBAJ_P0091647 Cep164 protein_coding protein_coding MGP_CBAJ_T0091520.1 MGP_CBAJ_G0034352.1 mouse_genomes_project 9 45593167 45611608 - MGP_CBAJ_P0091520 Nlrx1 protein_coding unknown_likely_coding MGP_CBAJ_T0094707.1 MGP_CBAJ_G0035079.1 mouse_genomes_project 9 130851273 130865978 - MGP_CBAJ_P0094707 Csrnp1 protein_coding unknown_likely_coding MGP_CBAJ_T0015793.1 MGP_CBAJ_G0013905.1 mouse_genomes_project 9 21375139 21375652 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098112.1 MGP_CBAJ_G0036385.1 mouse_genomes_project 9 35013551 35013681 + Gm23702 rRNA rRNA MGP_CBAJ_T0092364.1 MGP_CBAJ_G0034611.1 mouse_genomes_project 9 69244346 69263856 + MGP_CBAJ_P0092364 Rasl12 protein_coding protein_coding MGP_CBAJ_T0092365.1 MGP_CBAJ_G0034611.1 mouse_genomes_project 9 69244346 69261711 + MGP_CBAJ_P0092365 Rasl12 protein_coding protein_coding MGP_CBAJ_T0091279.1 MGP_CBAJ_G0034220.1 mouse_genomes_project 9 37786134 37789319 - Robo3 protein_coding retained_intron MGP_CBAJ_T0091280.1 MGP_CBAJ_G0034220.1 mouse_genomes_project 9 37786510 37793057 - Robo3 protein_coding retained_intron MGP_CBAJ_T0091281.1 MGP_CBAJ_G0034220.1 mouse_genomes_project 9 37786510 37805341 - MGP_CBAJ_P0091281 Robo3 protein_coding protein_coding MGP_CBAJ_T0091282.1 MGP_CBAJ_G0034220.1 mouse_genomes_project 9 37786510 37802301 - MGP_CBAJ_P0091282 Robo3 protein_coding protein_coding MGP_CBAJ_T0091283.1 MGP_CBAJ_G0034220.1 mouse_genomes_project 9 37786627 37802301 - Robo3 protein_coding retained_intron MGP_CBAJ_T0091284.1 MGP_CBAJ_G0034220.1 mouse_genomes_project 9 37787868 37789246 - Robo3 protein_coding retained_intron MGP_CBAJ_T0091285.1 MGP_CBAJ_G0034220.1 mouse_genomes_project 9 37791315 37805179 - MGP_CBAJ_P0091285 Robo3 protein_coding unknown_likely_coding MGP_CBAJ_T0011614.1 MGP_CBAJ_G0009752.1 mouse_genomes_project 9 85733111 85733397 + Gm25433 misc_RNA misc_RNA MGP_CBAJ_T0097862.1 MGP_CBAJ_G0036135.1 mouse_genomes_project 9 119489072 119492263 + pseudogene pseudogene MGP_CBAJ_T0093682.1 MGP_CBAJ_G0034893.1 mouse_genomes_project 9 115419691 115449494 - MGP_CBAJ_P0093682 Tex264 protein_coding protein_coding MGP_CBAJ_T0093683.1 MGP_CBAJ_G0034893.1 mouse_genomes_project 9 115419691 115449353 - MGP_CBAJ_P0093683 Tex264 protein_coding protein_coding MGP_CBAJ_T0093684.1 MGP_CBAJ_G0034893.1 mouse_genomes_project 9 115419697 115449586 - MGP_CBAJ_P0093684 Tex264 protein_coding protein_coding MGP_CBAJ_T0093685.1 MGP_CBAJ_G0034893.1 mouse_genomes_project 9 115419937 115424903 - Tex264 protein_coding processed_transcript MGP_CBAJ_T0093686.1 MGP_CBAJ_G0034893.1 mouse_genomes_project 9 115419993 115449590 - Tex264 protein_coding processed_transcript MGP_CBAJ_T0093687.1 MGP_CBAJ_G0034893.1 mouse_genomes_project 9 115420182 115449598 - Tex264 protein_coding processed_transcript MGP_CBAJ_T0093688.1 MGP_CBAJ_G0034893.1 mouse_genomes_project 9 115423335 115449580 - Tex264 protein_coding processed_transcript MGP_CBAJ_T0093689.1 MGP_CBAJ_G0034893.1 mouse_genomes_project 9 115438941 115448976 - Tex264 protein_coding processed_transcript MGP_CBAJ_T0093690.1 MGP_CBAJ_G0034893.1 mouse_genomes_project 9 115448603 115449574 - Tex264 protein_coding processed_transcript MGP_CBAJ_T0093460.1 MGP_CBAJ_G0034851.1 mouse_genomes_project 9 111642435 111654321 - MGP_CBAJ_P0093460 Cdv3 protein_coding protein_coding MGP_CBAJ_T0093461.1 MGP_CBAJ_G0034851.1 mouse_genomes_project 9 111644901 111654080 - MGP_CBAJ_P0093461 Cdv3 protein_coding protein_coding MGP_CBAJ_T0093462.1 MGP_CBAJ_G0034851.1 mouse_genomes_project 9 111650560 111653933 - Cdv3 protein_coding retained_intron MGP_CBAJ_T0093291.1 MGP_CBAJ_G0034817.1 mouse_genomes_project 9 106802687 106920305 - MGP_CBAJ_P0093291 Pik3cb protein_coding protein_coding MGP_CBAJ_T0093292.1 MGP_CBAJ_G0034817.1 mouse_genomes_project 9 106804434 106920143 - MGP_CBAJ_P0093292 Pik3cb protein_coding nonsense_mediated_decay MGP_CBAJ_T0093293.1 MGP_CBAJ_G0034817.1 mouse_genomes_project 9 106804436 106920355 - MGP_CBAJ_P0093293 Pik3cb protein_coding unknown_likely_coding MGP_CBAJ_T0093294.1 MGP_CBAJ_G0034817.1 mouse_genomes_project 9 106878402 106920839 - MGP_CBAJ_P0093294 Pik3cb protein_coding protein_coding MGP_CBAJ_T0091043.1 MGP_CBAJ_G0034152.1 mouse_genomes_project 9 24661617 24798315 + MGP_CBAJ_P0091043 Eepd1 protein_coding protein_coding MGP_CBAJ_T0091044.1 MGP_CBAJ_G0034152.1 mouse_genomes_project 9 24662935 24667375 + Eepd1 protein_coding processed_transcript MGP_CBAJ_T0100863.1 MGP_CBAJ_G0039118.1 mouse_genomes_project 9 33881061 33881192 + Gm25439 snoRNA snoRNA MGP_CBAJ_T0094478.1 MGP_CBAJ_G0035019.1 mouse_genomes_project 9 120620276 120652272 + MGP_CBAJ_P0094478 Ltf protein_coding protein_coding MGP_CBAJ_T0094479.1 MGP_CBAJ_G0035019.1 mouse_genomes_project 9 120620297 120626006 + MGP_CBAJ_P0094479 Ltf protein_coding protein_coding MGP_CBAJ_T0094480.1 MGP_CBAJ_G0035019.1 mouse_genomes_project 9 120620297 120654517 + MGP_CBAJ_P0094480 Ltf protein_coding protein_coding MGP_CBAJ_T0094481.1 MGP_CBAJ_G0035019.1 mouse_genomes_project 9 120620297 120652272 + MGP_CBAJ_P0094481 Ltf protein_coding protein_coding MGP_CBAJ_T0094482.1 MGP_CBAJ_G0035019.1 mouse_genomes_project 9 120620315 120628547 + MGP_CBAJ_P0094482 Ltf protein_coding protein_coding MGP_CBAJ_T0094483.1 MGP_CBAJ_G0035019.1 mouse_genomes_project 9 120625958 120630938 + MGP_CBAJ_P0094483 Ltf protein_coding nonsense_mediated_decay MGP_CBAJ_T0094484.1 MGP_CBAJ_G0035019.1 mouse_genomes_project 9 120627924 120629044 + Ltf protein_coding retained_intron MGP_CBAJ_T0094485.1 MGP_CBAJ_G0035019.1 mouse_genomes_project 9 120630638 120631968 + Ltf protein_coding retained_intron MGP_CBAJ_T0094486.1 MGP_CBAJ_G0035019.1 mouse_genomes_project 9 120630877 120647360 + MGP_CBAJ_P0094486 Ltf protein_coding protein_coding MGP_CBAJ_T0094487.1 MGP_CBAJ_G0035019.1 mouse_genomes_project 9 120642363 120652256 + MGP_CBAJ_P0094487 Ltf protein_coding nonsense_mediated_decay MGP_CBAJ_T0094488.1 MGP_CBAJ_G0035019.1 mouse_genomes_project 9 120647190 120652256 + Ltf protein_coding retained_intron MGP_CBAJ_T0094489.1 MGP_CBAJ_G0035019.1 mouse_genomes_project 9 120650574 120654077 + MGP_CBAJ_P0094489 Ltf protein_coding protein_coding MGP_CBAJ_T0092673.1 MGP_CBAJ_G0034676.1 mouse_genomes_project 9 77705533 77759664 + MGP_CBAJ_P0092673 Gm44503 protein_coding nonsense_mediated_decay MGP_CBAJ_T0100874.1 MGP_CBAJ_G0039129.1 mouse_genomes_project 9 48221840 48221970 + Gm22659 snoRNA snoRNA MGP_CBAJ_T0091626.1 MGP_CBAJ_G0034387.1 mouse_genomes_project 9 46611431 46630091 + MGP_CBAJ_P0091626 Scn4b protein_coding protein_coding MGP_CBAJ_T0091314.1 MGP_CBAJ_G0034239.1 mouse_genomes_project 9 38574284 38575214 + MGP_CBAJ_P0091314 Olfr887 protein_coding protein_coding MGP_CBAJ_T0009138.1 MGP_CBAJ_G0007333.1 mouse_genomes_project 9 50971486 50975616 - 1700042D02Rik lincRNA lincRNA MGP_CBAJ_T0094332.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119540925 119557725 - MGP_CBAJ_P0094332 Dhx30 protein_coding protein_coding MGP_CBAJ_T0094333.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119540925 119573288 - MGP_CBAJ_P0094333 Dhx30 protein_coding protein_coding MGP_CBAJ_T0094334.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119540925 119573696 - MGP_CBAJ_P0094334 Dhx30 protein_coding protein_coding MGP_CBAJ_T0094335.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119540925 119573299 - MGP_CBAJ_P0094335 Dhx30 protein_coding protein_coding MGP_CBAJ_T0094336.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119540926 119566204 - Dhx30 protein_coding retained_intron MGP_CBAJ_T0094337.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119540926 119541597 - MGP_CBAJ_P0094337 Dhx30 protein_coding protein_coding MGP_CBAJ_T0094338.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119540926 119573303 - MGP_CBAJ_P0094338 Dhx30 protein_coding protein_coding MGP_CBAJ_T0094339.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119540926 119570944 - MGP_CBAJ_P0094339 Dhx30 protein_coding protein_coding MGP_CBAJ_T0094340.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119540926 119541656 - MGP_CBAJ_P0094340 Dhx30 protein_coding protein_coding MGP_CBAJ_T0094341.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119540927 119573277 - MGP_CBAJ_P0094341 Dhx30 protein_coding protein_coding MGP_CBAJ_T0094342.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119540928 119573201 - MGP_CBAJ_P0094342 Dhx30 protein_coding protein_coding MGP_CBAJ_T0094343.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119541123 119542121 - MGP_CBAJ_P0094343 Dhx30 protein_coding protein_coding MGP_CBAJ_T0094344.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119542924 119544060 - Dhx30 protein_coding retained_intron MGP_CBAJ_T0094345.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119544548 119548100 - Dhx30 protein_coding retained_intron MGP_CBAJ_T0094346.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119546434 119566672 - Dhx30 protein_coding retained_intron MGP_CBAJ_T0094347.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119549598 119557677 - MGP_CBAJ_P0094347 Dhx30 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094348.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119549706 119572650 - MGP_CBAJ_P0094348 Dhx30 protein_coding protein_coding MGP_CBAJ_T0094349.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119549748 119557676 - MGP_CBAJ_P0094349 Dhx30 protein_coding protein_coding MGP_CBAJ_T0094350.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119555379 119571173 - MGP_CBAJ_P0094350 Dhx30 protein_coding protein_coding MGP_CBAJ_T0094351.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119555467 119572953 - MGP_CBAJ_P0094351 Dhx30 protein_coding protein_coding MGP_CBAJ_T0094352.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119565338 119573285 - MGP_CBAJ_P0094352 Dhx30 protein_coding protein_coding MGP_CBAJ_T0094353.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119568948 119573297 - Dhx30 protein_coding processed_transcript MGP_CBAJ_T0094354.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119570042 119573240 - Dhx30 protein_coding retained_intron MGP_CBAJ_T0094355.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119570980 119573498 - Dhx30 protein_coding processed_transcript MGP_CBAJ_T0094356.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119571289 119572974 - Dhx30 protein_coding processed_transcript MGP_CBAJ_T0094357.1 MGP_CBAJ_G0034992.1 mouse_genomes_project 9 119571358 119573251 - Dhx30 protein_coding processed_transcript MGP_CBAJ_T0094588.1 MGP_CBAJ_G0035041.1 mouse_genomes_project 9 124640680 124641408 + MGP_CBAJ_P0094588 protein_coding protein_coding MGP_CBAJ_T0099638.1 MGP_CBAJ_G0037893.1 mouse_genomes_project 9 110572012 110572115 + Gm22894 snRNA snRNA MGP_CBAJ_T0090573.1 MGP_CBAJ_G0033961.1 mouse_genomes_project 9 97550 178407 + MGP_CBAJ_P0090573 Cwf19l2 protein_coding protein_coding MGP_CBAJ_T0093350.1 MGP_CBAJ_G0034830.1 mouse_genomes_project 9 108548513 108567421 - MGP_CBAJ_P0093350 Slc35g2 protein_coding protein_coding MGP_CBAJ_T0093351.1 MGP_CBAJ_G0034830.1 mouse_genomes_project 9 108548515 108549241 - Slc35g2 protein_coding processed_transcript MGP_CBAJ_T0090801.1 MGP_CBAJ_G0034051.1 mouse_genomes_project 9 17899397 17900345 - MGP_CBAJ_P0090801 Olfr850 protein_coding protein_coding MGP_CBAJ_T0091318.1 MGP_CBAJ_G0034243.1 mouse_genomes_project 9 38691122 38692073 - MGP_CBAJ_P0091318 Olfr891 protein_coding protein_coding MGP_CBAJ_T0002370.1 MGP_CBAJ_G0002282.1 mouse_genomes_project 9 96888557 96894887 - TEC TEC MGP_CBAJ_T0091336.1 MGP_CBAJ_G0034261.1 mouse_genomes_project 9 39102332 39104628 + MGP_CBAJ_P0091336 protein_coding protein_coding MGP_CBAJ_T0094673.1 MGP_CBAJ_G0035066.1 mouse_genomes_project 9 129971757 129989830 - MGP_CBAJ_P0094673 protein_coding protein_coding MGP_CBAJ_T0002322.1 MGP_CBAJ_G0002235.1 mouse_genomes_project 9 59085748 59087785 - TEC TEC MGP_CBAJ_T0005341.1 MGP_CBAJ_G0004519.1 mouse_genomes_project 9 23359061 23441429 + Gm10701 antisense antisense MGP_CBAJ_T0094890.1 MGP_CBAJ_G0035142.1 mouse_genomes_project 9 135513572 135519140 + MGP_CBAJ_P0094890 Ccr5 protein_coding protein_coding MGP_CBAJ_T0094891.1 MGP_CBAJ_G0035142.1 mouse_genomes_project 9 135513602 135517229 + Ccr5 protein_coding processed_transcript MGP_CBAJ_T0094892.1 MGP_CBAJ_G0035142.1 mouse_genomes_project 9 135513602 135523851 + MGP_CBAJ_P0094892 Ccr5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094893.1 MGP_CBAJ_G0035142.1 mouse_genomes_project 9 135513610 135516693 + MGP_CBAJ_P0094893 Ccr5 protein_coding protein_coding MGP_CBAJ_T0094894.1 MGP_CBAJ_G0035142.1 mouse_genomes_project 9 135518642 135522209 + Ccr5 protein_coding processed_transcript MGP_CBAJ_T0092002.1 MGP_CBAJ_G0034508.1 mouse_genomes_project 9 59636395 59649317 - MGP_CBAJ_P0092002 Snx33 protein_coding protein_coding MGP_CBAJ_T0010928.1 MGP_CBAJ_G0009066.1 mouse_genomes_project 9 42512087 42512167 + Mir100 miRNA miRNA MGP_CBAJ_T0093201.1 MGP_CBAJ_G0034794.1 mouse_genomes_project 9 103639108 103782349 + MGP_CBAJ_P0093201 Tfdp2 protein_coding protein_coding MGP_CBAJ_T0093202.1 MGP_CBAJ_G0034794.1 mouse_genomes_project 9 103639139 103783366 + MGP_CBAJ_P0093202 Tfdp2 protein_coding protein_coding MGP_CBAJ_T0093203.1 MGP_CBAJ_G0034794.1 mouse_genomes_project 9 103639171 103699524 + Tfdp2 protein_coding processed_transcript MGP_CBAJ_T0093204.1 MGP_CBAJ_G0034794.1 mouse_genomes_project 9 103639248 103782356 + MGP_CBAJ_P0093204 Tfdp2 protein_coding protein_coding MGP_CBAJ_T0093205.1 MGP_CBAJ_G0034794.1 mouse_genomes_project 9 103644930 103754846 + MGP_CBAJ_P0093205 Tfdp2 protein_coding protein_coding MGP_CBAJ_T0093206.1 MGP_CBAJ_G0034794.1 mouse_genomes_project 9 103713228 103770378 + MGP_CBAJ_P0093206 Tfdp2 protein_coding protein_coding MGP_CBAJ_T0093207.1 MGP_CBAJ_G0034794.1 mouse_genomes_project 9 103713265 103747615 + MGP_CBAJ_P0093207 Tfdp2 protein_coding protein_coding MGP_CBAJ_T0093208.1 MGP_CBAJ_G0034794.1 mouse_genomes_project 9 103713282 103782352 + MGP_CBAJ_P0093208 Tfdp2 protein_coding protein_coding MGP_CBAJ_T0093209.1 MGP_CBAJ_G0034794.1 mouse_genomes_project 9 103713814 103783290 + MGP_CBAJ_P0093209 Tfdp2 protein_coding protein_coding MGP_CBAJ_T0093210.1 MGP_CBAJ_G0034794.1 mouse_genomes_project 9 103748251 103751398 + Tfdp2 protein_coding retained_intron MGP_CBAJ_T0093211.1 MGP_CBAJ_G0034794.1 mouse_genomes_project 9 103764837 103767988 + Tfdp2 protein_coding retained_intron MGP_CBAJ_T0093212.1 MGP_CBAJ_G0034794.1 mouse_genomes_project 9 103770361 103782288 + MGP_CBAJ_P0093212 Tfdp2 protein_coding protein_coding MGP_CBAJ_T0091518.1 MGP_CBAJ_G0034350.1 mouse_genomes_project 9 45577442 45587256 + MGP_CBAJ_P0091518 Ccdc153 protein_coding protein_coding MGP_CBAJ_T0093262.1 MGP_CBAJ_G0034804.1 mouse_genomes_project 9 105958202 106083522 + MGP_CBAJ_P0093262 Nmnat3 protein_coding protein_coding MGP_CBAJ_T0093263.1 MGP_CBAJ_G0034804.1 mouse_genomes_project 9 105958222 106038712 + Nmnat3 protein_coding processed_transcript MGP_CBAJ_T0093264.1 MGP_CBAJ_G0034804.1 mouse_genomes_project 9 105967375 106026285 + Nmnat3 protein_coding retained_intron MGP_CBAJ_T0093265.1 MGP_CBAJ_G0034804.1 mouse_genomes_project 9 105967375 106104270 + MGP_CBAJ_P0093265 Nmnat3 protein_coding protein_coding MGP_CBAJ_T0093267.1 MGP_CBAJ_G0034804.1 mouse_genomes_project 9 106024583 106094455 + MGP_CBAJ_P0093267 Nmnat3 protein_coding protein_coding MGP_CBAJ_T0090823.1 MGP_CBAJ_G0034072.1 mouse_genomes_project 9 18991232 19017359 - protein_coding retained_intron MGP_CBAJ_T0090824.1 MGP_CBAJ_G0034072.1 mouse_genomes_project 9 18992589 19017395 - MGP_CBAJ_P0090824 protein_coding unknown_likely_coding MGP_CBAJ_T0090825.1 MGP_CBAJ_G0034072.1 mouse_genomes_project 9 18993264 19017391 - protein_coding retained_intron MGP_CBAJ_T0090826.1 MGP_CBAJ_G0034072.1 mouse_genomes_project 9 18994501 18997581 - protein_coding processed_transcript MGP_CBAJ_T0090827.1 MGP_CBAJ_G0034072.1 mouse_genomes_project 9 18998234 19017564 - protein_coding retained_intron MGP_CBAJ_T0090828.1 MGP_CBAJ_G0034072.1 mouse_genomes_project 9 19000523 19017229 - MGP_CBAJ_P0090828 protein_coding protein_coding MGP_CBAJ_T0015869.1 MGP_CBAJ_G0013981.1 mouse_genomes_project 9 94594057 94595528 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0092361.1 MGP_CBAJ_G0034608.1 mouse_genomes_project 9 69180808 69196398 + MGP_CBAJ_P0092361 Pdcd7 protein_coding protein_coding MGP_CBAJ_T0091604.1 MGP_CBAJ_G0034378.1 mouse_genomes_project 9 46366649 46411975 - MGP_CBAJ_P0091604 Ube4a protein_coding protein_coding MGP_CBAJ_T0091605.1 MGP_CBAJ_G0034378.1 mouse_genomes_project 9 46369366 46412015 - MGP_CBAJ_P0091605 Ube4a protein_coding protein_coding MGP_CBAJ_T0091606.1 MGP_CBAJ_G0034378.1 mouse_genomes_project 9 46376517 46411934 - MGP_CBAJ_P0091606 Ube4a protein_coding nonsense_mediated_decay MGP_CBAJ_T0091607.1 MGP_CBAJ_G0034378.1 mouse_genomes_project 9 46376617 46411940 - MGP_CBAJ_P0091607 Ube4a protein_coding nonsense_mediated_decay MGP_CBAJ_T0091608.1 MGP_CBAJ_G0034378.1 mouse_genomes_project 9 46392465 46411972 - Ube4a protein_coding retained_intron MGP_CBAJ_T0091609.1 MGP_CBAJ_G0034378.1 mouse_genomes_project 9 46399368 46411969 - MGP_CBAJ_P0091609 Ube4a protein_coding protein_coding MGP_CBAJ_T0091610.1 MGP_CBAJ_G0034378.1 mouse_genomes_project 9 46402697 46411951 - Ube4a protein_coding retained_intron MGP_CBAJ_T0092426.1 MGP_CBAJ_G0034628.1 mouse_genomes_project 9 70110589 70238022 + MGP_CBAJ_P0092426 Dapk2 protein_coding protein_coding MGP_CBAJ_T0092427.1 MGP_CBAJ_G0034628.1 mouse_genomes_project 9 70110601 70179310 + Dapk2 protein_coding retained_intron MGP_CBAJ_T0092428.1 MGP_CBAJ_G0034628.1 mouse_genomes_project 9 70177976 70234734 + MGP_CBAJ_P0092428 Dapk2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092429.1 MGP_CBAJ_G0034628.1 mouse_genomes_project 9 70231227 70237495 + Dapk2 protein_coding retained_intron MGP_CBAJ_T0009177.1 MGP_CBAJ_G0007366.1 mouse_genomes_project 9 87253048 87258659 + Gm27226 lincRNA lincRNA MGP_CBAJ_T0093385.1 MGP_CBAJ_G0034836.1 mouse_genomes_project 9 110072876 110553589 - MGP_CBAJ_P0093385 Ephb1 protein_coding protein_coding MGP_CBAJ_T0093386.1 MGP_CBAJ_G0034836.1 mouse_genomes_project 9 110073319 110553589 - MGP_CBAJ_P0093386 Ephb1 protein_coding protein_coding MGP_CBAJ_T0093388.1 MGP_CBAJ_G0034836.1 mouse_genomes_project 9 110201492 110553589 - MGP_CBAJ_P0093388 Ephb1 protein_coding protein_coding MGP_CBAJ_T0009193.1 MGP_CBAJ_G0007378.1 mouse_genomes_project 9 99300503 99303658 - Gm29139 lincRNA lincRNA MGP_CBAJ_T0090700.1 MGP_CBAJ_G0034006.1 mouse_genomes_project 9 12360987 12370919 + MGP_CBAJ_P0090700 Cwc15 protein_coding protein_coding MGP_CBAJ_T0092774.1 MGP_CBAJ_G0034702.1 mouse_genomes_project 9 81317585 81441516 - MGP_CBAJ_P0092774 Hcrtr2 protein_coding protein_coding MGP_CBAJ_T0092775.1 MGP_CBAJ_G0034702.1 mouse_genomes_project 9 81321700 81441761 - MGP_CBAJ_P0092775 Hcrtr2 protein_coding protein_coding MGP_CBAJ_T0092776.1 MGP_CBAJ_G0034702.1 mouse_genomes_project 9 81439581 81441227 - Hcrtr2 protein_coding retained_intron MGP_CBAJ_T0093677.1 MGP_CBAJ_G0034891.1 mouse_genomes_project 9 115381563 115382657 + MGP_CBAJ_P0093677 Iqcf6 protein_coding protein_coding MGP_CBAJ_T0093971.1 MGP_CBAJ_G0034933.1 mouse_genomes_project 9 116945498 116949066 + MGP_CBAJ_P0093971 Gmppb protein_coding protein_coding MGP_CBAJ_T0093972.1 MGP_CBAJ_G0034933.1 mouse_genomes_project 9 116945525 116945838 + Gmppb protein_coding processed_transcript MGP_CBAJ_T0093973.1 MGP_CBAJ_G0034933.1 mouse_genomes_project 9 116945545 116948173 + Gmppb protein_coding retained_intron MGP_CBAJ_T0093974.1 MGP_CBAJ_G0034933.1 mouse_genomes_project 9 116945581 116947959 + MGP_CBAJ_P0093974 Gmppb protein_coding protein_coding MGP_CBAJ_T0093975.1 MGP_CBAJ_G0034933.1 mouse_genomes_project 9 116945711 116947776 + Gmppb protein_coding retained_intron MGP_CBAJ_T0092057.1 MGP_CBAJ_G0034527.1 mouse_genomes_project 9 60442047 60457962 - MGP_CBAJ_P0092057 Lman1l protein_coding protein_coding MGP_CBAJ_T0092058.1 MGP_CBAJ_G0034527.1 mouse_genomes_project 9 60442047 60457962 - MGP_CBAJ_P0092058 Lman1l protein_coding protein_coding MGP_CBAJ_T0002366.1 MGP_CBAJ_G0002278.1 mouse_genomes_project 9 94192717 94194546 - TEC TEC MGP_CBAJ_T0002312.1 MGP_CBAJ_G0002225.1 mouse_genomes_project 9 32324960 32327598 - TEC TEC MGP_CBAJ_T0091135.1 MGP_CBAJ_G0034180.1 mouse_genomes_project 9 32238358 32365279 - MGP_CBAJ_P0091135 Fli1 protein_coding protein_coding MGP_CBAJ_T0091136.1 MGP_CBAJ_G0034180.1 mouse_genomes_project 9 32245478 32366537 - MGP_CBAJ_P0091136 Fli1 protein_coding protein_coding MGP_CBAJ_T0010934.1 MGP_CBAJ_G0009072.1 mouse_genomes_project 9 45754523 45754589 + Mir7085 miRNA miRNA MGP_CBAJ_T0090722.1 MGP_CBAJ_G0034013.1 mouse_genomes_project 9 12774472 12785052 + MGP_CBAJ_P0090722 Gpr83 protein_coding protein_coding MGP_CBAJ_T0090723.1 MGP_CBAJ_G0034013.1 mouse_genomes_project 9 12774516 12784573 + MGP_CBAJ_P0090723 Gpr83 protein_coding protein_coding MGP_CBAJ_T0090724.1 MGP_CBAJ_G0034013.1 mouse_genomes_project 9 12779602 12785052 + Gpr83 protein_coding retained_intron MGP_CBAJ_T0009161.1 MGP_CBAJ_G0007351.1 mouse_genomes_project 9 76837542 76860010 - Gm27188 lincRNA lincRNA MGP_CBAJ_T0097858.1 MGP_CBAJ_G0036131.1 mouse_genomes_project 9 39080630 39081564 + pseudogene pseudogene MGP_CBAJ_T0090761.1 MGP_CBAJ_G0034024.1 mouse_genomes_project 9 13744788 13778523 + MGP_CBAJ_P0090761 Slc36a4 protein_coding protein_coding MGP_CBAJ_T0091009.1 MGP_CBAJ_G0034139.1 mouse_genomes_project 9 21208080 21274541 - MGP_CBAJ_P0091009 Anln protein_coding protein_coding MGP_CBAJ_T0015825.1 MGP_CBAJ_G0013937.1 mouse_genomes_project 9 76429496 76429758 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002384.1 MGP_CBAJ_G0002296.1 mouse_genomes_project 9 106179611 106180791 + TEC TEC MGP_CBAJ_T0002406.1 MGP_CBAJ_G0002318.1 mouse_genomes_project 9 111739400 111741608 + TEC TEC MGP_CBAJ_T0091359.1 MGP_CBAJ_G0034278.1 mouse_genomes_project 9 39626717 39627778 - MGP_CBAJ_P0091359 Olfr146 protein_coding protein_coding MGP_CBAJ_T0100872.1 MGP_CBAJ_G0039127.1 mouse_genomes_project 9 45749896 45750015 - Gm26306 snoRNA snoRNA MGP_CBAJ_T0094756.1 MGP_CBAJ_G0035093.1 mouse_genomes_project 9 132372925 132474249 + MGP_CBAJ_P0094756 Trak1 protein_coding unknown_likely_coding MGP_CBAJ_T0094757.1 MGP_CBAJ_G0035093.1 mouse_genomes_project 9 132376972 132496514 + MGP_CBAJ_P0094757 Trak1 protein_coding protein_coding MGP_CBAJ_T0094377.1 MGP_CBAJ_G0034996.1 mouse_genomes_project 9 119831797 119876698 + MGP_CBAJ_P0094377 Scap protein_coding protein_coding MGP_CBAJ_T0094378.1 MGP_CBAJ_G0034996.1 mouse_genomes_project 9 119831805 119851911 + Scap protein_coding retained_intron MGP_CBAJ_T0094379.1 MGP_CBAJ_G0034996.1 mouse_genomes_project 9 119831865 119890169 + MGP_CBAJ_P0094379 Scap protein_coding protein_coding MGP_CBAJ_T0094380.1 MGP_CBAJ_G0034996.1 mouse_genomes_project 9 119832059 119851759 + MGP_CBAJ_P0094380 Scap protein_coding protein_coding MGP_CBAJ_T0094381.1 MGP_CBAJ_G0034996.1 mouse_genomes_project 9 119832145 119875930 + MGP_CBAJ_P0094381 Scap protein_coding protein_coding MGP_CBAJ_T0094382.1 MGP_CBAJ_G0034996.1 mouse_genomes_project 9 119842743 119851759 + MGP_CBAJ_P0094382 Scap protein_coding protein_coding MGP_CBAJ_T0094383.1 MGP_CBAJ_G0034996.1 mouse_genomes_project 9 119864874 119867379 + Scap protein_coding retained_intron MGP_CBAJ_T0094384.1 MGP_CBAJ_G0034996.1 mouse_genomes_project 9 119865307 119875899 + Scap protein_coding processed_transcript MGP_CBAJ_T0094385.1 MGP_CBAJ_G0034996.1 mouse_genomes_project 9 119877926 119880297 + Scap protein_coding retained_intron MGP_CBAJ_T0094386.1 MGP_CBAJ_G0034996.1 mouse_genomes_project 9 119883526 119884009 + Scap protein_coding retained_intron MGP_CBAJ_T0002428.1 MGP_CBAJ_G0002340.1 mouse_genomes_project 9 119492975 119494584 + TEC TEC MGP_CBAJ_T0092576.1 MGP_CBAJ_G0034664.1 mouse_genomes_project 9 76038156 76159648 - MGP_CBAJ_P0092576 Gcom1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092577.1 MGP_CBAJ_G0034664.1 mouse_genomes_project 9 76038156 76159648 - MGP_CBAJ_P0092577 Gcom1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092578.1 MGP_CBAJ_G0034664.1 mouse_genomes_project 9 76038156 76159648 - MGP_CBAJ_P0092578 Gcom1 protein_coding protein_coding MGP_CBAJ_T0092579.1 MGP_CBAJ_G0034664.1 mouse_genomes_project 9 76038156 76159648 - MGP_CBAJ_P0092579 Gcom1 protein_coding protein_coding MGP_CBAJ_T0091759.1 MGP_CBAJ_G0034431.1 mouse_genomes_project 9 52568763 52581709 + MGP_CBAJ_P0091759 Plet1 protein_coding protein_coding MGP_CBAJ_T0091760.1 MGP_CBAJ_G0034431.1 mouse_genomes_project 9 52568765 52576005 + MGP_CBAJ_P0091760 Plet1 protein_coding protein_coding MGP_CBAJ_T0091069.1 MGP_CBAJ_G0034160.1 mouse_genomes_project 9 26305765 26377591 + MGP_CBAJ_P0091069 Ncapd3 protein_coding protein_coding MGP_CBAJ_T0091012.1 MGP_CBAJ_G0034142.1 mouse_genomes_project 9 21349177 21356944 + MGP_CBAJ_P0091012 Gm17545 protein_coding protein_coding MGP_CBAJ_T0011605.1 MGP_CBAJ_G0009743.1 mouse_genomes_project 9 16890862 16891168 + Gm25295 misc_RNA misc_RNA MGP_CBAJ_T0091311.1 MGP_CBAJ_G0034237.1 mouse_genomes_project 9 38529205 38530778 + MGP_CBAJ_P0091311 Olfr884 protein_coding protein_coding MGP_CBAJ_T0091312.1 MGP_CBAJ_G0034237.1 mouse_genomes_project 9 38529848 38530778 + MGP_CBAJ_P0091312 Olfr884 protein_coding protein_coding MGP_CBAJ_T0092275.1 MGP_CBAJ_G0034584.1 mouse_genomes_project 9 66977879 67178412 - MGP_CBAJ_P0092275 Iqch protein_coding protein_coding MGP_CBAJ_T0092276.1 MGP_CBAJ_G0034584.1 mouse_genomes_project 9 66978041 67178367 - MGP_CBAJ_P0092276 Iqch protein_coding protein_coding MGP_CBAJ_T0092277.1 MGP_CBAJ_G0034584.1 mouse_genomes_project 9 66978041 67178367 - MGP_CBAJ_P0092277 Iqch protein_coding protein_coding MGP_CBAJ_T0092278.1 MGP_CBAJ_G0034584.1 mouse_genomes_project 9 66978083 67178402 - MGP_CBAJ_P0092278 Iqch protein_coding protein_coding MGP_CBAJ_T0092279.1 MGP_CBAJ_G0034584.1 mouse_genomes_project 9 66978256 67178336 - MGP_CBAJ_P0092279 Iqch protein_coding protein_coding MGP_CBAJ_T0092280.1 MGP_CBAJ_G0034584.1 mouse_genomes_project 9 67156710 67178404 - Iqch protein_coding retained_intron MGP_CBAJ_T0091845.1 MGP_CBAJ_G0034451.1 mouse_genomes_project 9 53209905 53235097 - MGP_CBAJ_P0091845 4833427G06Rik protein_coding protein_coding MGP_CBAJ_T0099607.1 MGP_CBAJ_G0037862.1 mouse_genomes_project 9 55024185 55024303 + Gm22242 snRNA snRNA MGP_CBAJ_T0002326.1 MGP_CBAJ_G0002239.1 mouse_genomes_project 9 76502411 76505153 - TEC TEC MGP_CBAJ_T0099626.1 MGP_CBAJ_G0037881.1 mouse_genomes_project 9 79229123 79229238 + Gm24141 snRNA snRNA MGP_CBAJ_T0091383.1 MGP_CBAJ_G0034296.1 mouse_genomes_project 9 40314610 40315627 + MGP_CBAJ_P0091383 Olfr148 protein_coding protein_coding MGP_CBAJ_T0018326.1 MGP_CBAJ_G0015501.1 mouse_genomes_project 9 120582831 120603688 + Gm10030 processed_transcript antisense MGP_CBAJ_T0018327.1 MGP_CBAJ_G0015501.1 mouse_genomes_project 9 120595892 120602184 + Gm10030 processed_transcript retained_intron MGP_CBAJ_T0018328.1 MGP_CBAJ_G0015501.1 mouse_genomes_project 9 120600321 120602489 + Gm10030 processed_transcript processed_transcript MGP_CBAJ_T0094680.1 MGP_CBAJ_G0035069.1 mouse_genomes_project 9 130146833 130149910 + MGP_CBAJ_P0094680 protein_coding protein_coding MGP_CBAJ_T0094682.1 MGP_CBAJ_G0035069.1 mouse_genomes_project 9 130148204 130155078 + MGP_CBAJ_P0094682 protein_coding protein_coding MGP_CBAJ_T0094683.1 MGP_CBAJ_G0035069.1 mouse_genomes_project 9 130148571 130156571 + protein_coding retained_intron MGP_CBAJ_T0094684.1 MGP_CBAJ_G0035069.1 mouse_genomes_project 9 130148614 130151866 + protein_coding retained_intron MGP_CBAJ_T0094685.1 MGP_CBAJ_G0035069.1 mouse_genomes_project 9 130153254 130156050 + protein_coding retained_intron MGP_CBAJ_T0094686.1 MGP_CBAJ_G0035069.1 mouse_genomes_project 9 130153636 130156290 + MGP_CBAJ_P0094686 protein_coding unknown_likely_coding MGP_CBAJ_T0094687.1 MGP_CBAJ_G0035069.1 mouse_genomes_project 9 130155799 130156263 + protein_coding retained_intron MGP_CBAJ_T0092695.1 MGP_CBAJ_G0034680.1 mouse_genomes_project 9 77787927 77840472 + MGP_CBAJ_P0092695 Rab27a protein_coding protein_coding MGP_CBAJ_T0092696.1 MGP_CBAJ_G0034680.1 mouse_genomes_project 9 77787930 77840436 + MGP_CBAJ_P0092696 Rab27a protein_coding protein_coding MGP_CBAJ_T0092697.1 MGP_CBAJ_G0034680.1 mouse_genomes_project 9 77788057 77827592 + Rab27a protein_coding retained_intron MGP_CBAJ_T0092698.1 MGP_CBAJ_G0034680.1 mouse_genomes_project 9 77837677 77839258 + Rab27a protein_coding retained_intron MGP_CBAJ_T0005457.1 MGP_CBAJ_G0004597.1 mouse_genomes_project 9 116416612 116428259 - Gm16343 antisense antisense MGP_CBAJ_T0091388.1 MGP_CBAJ_G0034301.1 mouse_genomes_project 9 40440947 40441886 + MGP_CBAJ_P0091388 Olfr965 protein_coding protein_coding MGP_CBAJ_T0002327.1 MGP_CBAJ_G0002240.1 mouse_genomes_project 9 76548960 76550955 - TEC TEC MGP_CBAJ_T0091394.1 MGP_CBAJ_G0034307.1 mouse_genomes_project 9 40632122 40633148 + MGP_CBAJ_P0091394 Olfr972 protein_coding protein_coding MGP_CBAJ_T0091030.1 MGP_CBAJ_G0034146.1 mouse_genomes_project 9 23434560 23514049 - MGP_CBAJ_P0091030 Dpy19l1 protein_coding protein_coding MGP_CBAJ_T0091031.1 MGP_CBAJ_G0034146.1 mouse_genomes_project 9 23434562 23534201 - MGP_CBAJ_P0091031 Dpy19l1 protein_coding protein_coding MGP_CBAJ_T0091032.1 MGP_CBAJ_G0034146.1 mouse_genomes_project 9 23434585 23534201 - MGP_CBAJ_P0091032 Dpy19l1 protein_coding protein_coding MGP_CBAJ_T0091033.1 MGP_CBAJ_G0034146.1 mouse_genomes_project 9 23434833 23446633 - Dpy19l1 protein_coding retained_intron MGP_CBAJ_T0091034.1 MGP_CBAJ_G0034146.1 mouse_genomes_project 9 23444982 23449094 - Dpy19l1 protein_coding retained_intron MGP_CBAJ_T0091035.1 MGP_CBAJ_G0034146.1 mouse_genomes_project 9 23508205 23528216 - Dpy19l1 protein_coding processed_transcript MGP_CBAJ_T0090968.1 MGP_CBAJ_G0034118.1 mouse_genomes_project 9 20628641 20630478 + MGP_CBAJ_P0090968 Angptl8 protein_coding protein_coding MGP_CBAJ_T0011619.1 MGP_CBAJ_G0009757.1 mouse_genomes_project 9 115397376 115397642 + Gm26185 misc_RNA misc_RNA MGP_CBAJ_T0097855.1 MGP_CBAJ_G0036128.1 mouse_genomes_project 9 17326741 17327010 - pseudogene pseudogene MGP_CBAJ_T0092296.1 MGP_CBAJ_G0034589.1 mouse_genomes_project 9 67773036 67814875 - MGP_CBAJ_P0092296 Zwilch protein_coding protein_coding MGP_CBAJ_T0092297.1 MGP_CBAJ_G0034589.1 mouse_genomes_project 9 67773561 67814629 - MGP_CBAJ_P0092297 Zwilch protein_coding protein_coding MGP_CBAJ_T0092298.1 MGP_CBAJ_G0034589.1 mouse_genomes_project 9 67773604 67783825 - Zwilch protein_coding retained_intron MGP_CBAJ_T0092299.1 MGP_CBAJ_G0034589.1 mouse_genomes_project 9 67775774 67814665 - MGP_CBAJ_P0092299 Zwilch protein_coding protein_coding MGP_CBAJ_T0092300.1 MGP_CBAJ_G0034589.1 mouse_genomes_project 9 67775851 67789720 - MGP_CBAJ_P0092300 Zwilch protein_coding nonsense_mediated_decay MGP_CBAJ_T0092301.1 MGP_CBAJ_G0034589.1 mouse_genomes_project 9 67775853 67786973 - MGP_CBAJ_P0092301 Zwilch protein_coding nonsense_mediated_decay MGP_CBAJ_T0092302.1 MGP_CBAJ_G0034589.1 mouse_genomes_project 9 67783797 67794956 - Zwilch protein_coding retained_intron MGP_CBAJ_T0092303.1 MGP_CBAJ_G0034589.1 mouse_genomes_project 9 67786989 67795204 - Zwilch protein_coding retained_intron MGP_CBAJ_T0092304.1 MGP_CBAJ_G0034589.1 mouse_genomes_project 9 67794641 67814684 - MGP_CBAJ_P0092304 Zwilch protein_coding protein_coding MGP_CBAJ_T0092305.1 MGP_CBAJ_G0034589.1 mouse_genomes_project 9 67802780 67814677 - MGP_CBAJ_P0092305 Zwilch protein_coding nonsense_mediated_decay MGP_CBAJ_T0092306.1 MGP_CBAJ_G0034589.1 mouse_genomes_project 9 67803199 67814659 - MGP_CBAJ_P0092306 Zwilch protein_coding protein_coding MGP_CBAJ_T0092307.1 MGP_CBAJ_G0034589.1 mouse_genomes_project 9 67804487 67814661 - MGP_CBAJ_P0092307 Zwilch protein_coding nonsense_mediated_decay MGP_CBAJ_T0092308.1 MGP_CBAJ_G0034589.1 mouse_genomes_project 9 67809910 67814674 - Zwilch protein_coding retained_intron MGP_CBAJ_T0092556.1 MGP_CBAJ_G0034659.1 mouse_genomes_project 9 75180302 75292895 + MGP_CBAJ_P0092556 Adam10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092557.1 MGP_CBAJ_G0034659.1 mouse_genomes_project 9 75180302 75294742 + MGP_CBAJ_P0092557 Adam10 protein_coding protein_coding MGP_CBAJ_T0092558.1 MGP_CBAJ_G0034659.1 mouse_genomes_project 9 75180321 75258533 + MGP_CBAJ_P0092558 Adam10 protein_coding protein_coding MGP_CBAJ_T0092559.1 MGP_CBAJ_G0034659.1 mouse_genomes_project 9 75290566 75292891 + Adam10 protein_coding retained_intron MGP_CBAJ_T0015794.1 MGP_CBAJ_G0013906.1 mouse_genomes_project 9 21581514 21585005 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015828.1 MGP_CBAJ_G0013940.1 mouse_genomes_project 9 76744225 76745030 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0093483.1 MGP_CBAJ_G0034857.1 mouse_genomes_project 9 112409658 112411607 + Acad11 protein_coding retained_intron MGP_CBAJ_T0093484.1 MGP_CBAJ_G0034857.1 mouse_genomes_project 9 112409697 112492887 + MGP_CBAJ_P0093484 Acad11 protein_coding protein_coding MGP_CBAJ_T0093486.1 MGP_CBAJ_G0034857.1 mouse_genomes_project 9 112451560 112476461 + Acad11 protein_coding processed_transcript MGP_CBAJ_T0093487.1 MGP_CBAJ_G0034857.1 mouse_genomes_project 9 112458606 112470979 + MGP_CBAJ_P0093487 Acad11 protein_coding protein_coding MGP_CBAJ_T0093490.1 MGP_CBAJ_G0034857.1 mouse_genomes_project 9 112473339 112476799 + Acad11 protein_coding retained_intron MGP_CBAJ_T0093491.1 MGP_CBAJ_G0034857.1 mouse_genomes_project 9 112489077 112492251 + Acad11 protein_coding processed_transcript MGP_CBAJ_T0015855.1 MGP_CBAJ_G0013967.1 mouse_genomes_project 9 86805792 86806664 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0091403.1 MGP_CBAJ_G0034316.1 mouse_genomes_project 9 40873908 40874853 - MGP_CBAJ_P0091403 Olfr984 protein_coding protein_coding MGP_CBAJ_T0090765.1 MGP_CBAJ_G0034027.1 mouse_genomes_project 9 15136278 15136805 + MGP_CBAJ_P0090765 protein_coding protein_coding MGP_CBAJ_T0009152.1 MGP_CBAJ_G0007345.1 mouse_genomes_project 9 66291117 66294621 + Gm26609 lincRNA lincRNA MGP_CBAJ_T0002379.1 MGP_CBAJ_G0002291.1 mouse_genomes_project 9 102717876 102718968 + TEC TEC MGP_CBAJ_T0094728.1 MGP_CBAJ_G0035088.1 mouse_genomes_project 9 131458176 131488605 + MGP_CBAJ_P0094728 Entpd3 protein_coding protein_coding MGP_CBAJ_T0094729.1 MGP_CBAJ_G0035088.1 mouse_genomes_project 9 131476369 131481206 + Entpd3 protein_coding retained_intron MGP_CBAJ_T0002347.1 MGP_CBAJ_G0002260.1 mouse_genomes_project 9 78340653 78342673 - TEC TEC MGP_CBAJ_T0090589.1 MGP_CBAJ_G0033969.1 mouse_genomes_project 9 2235783 2258282 + MGP_CBAJ_P0090589 Casp12 protein_coding protein_coding MGP_CBAJ_T0090590.1 MGP_CBAJ_G0033969.1 mouse_genomes_project 9 2235829 2258132 + MGP_CBAJ_P0090590 Casp12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090591.1 MGP_CBAJ_G0033969.1 mouse_genomes_project 9 2235832 2244623 + Casp12 protein_coding retained_intron MGP_CBAJ_T0090592.1 MGP_CBAJ_G0033969.1 mouse_genomes_project 9 2235849 2245626 + Casp12 protein_coding retained_intron MGP_CBAJ_T0090593.1 MGP_CBAJ_G0033969.1 mouse_genomes_project 9 2235857 2251113 + MGP_CBAJ_P0090593 Casp12 protein_coding protein_coding MGP_CBAJ_T0100857.1 MGP_CBAJ_G0039112.1 mouse_genomes_project 9 19496965 19497050 + Gm24067 snoRNA snoRNA MGP_CBAJ_T0092845.1 MGP_CBAJ_G0034723.1 mouse_genomes_project 9 83930015 83941058 - MGP_CBAJ_P0092845 Mb21d1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092846.1 MGP_CBAJ_G0034723.1 mouse_genomes_project 9 83931151 83941251 - MGP_CBAJ_P0092846 Mb21d1 protein_coding protein_coding MGP_CBAJ_T0005336.1 MGP_CBAJ_G0004516.1 mouse_genomes_project 9 19716805 19759278 + 1700084C06Rik antisense antisense MGP_CBAJ_T0002356.1 MGP_CBAJ_G0002269.1 mouse_genomes_project 9 89502644 89507371 + TEC TEC MGP_CBAJ_T0009212.1 MGP_CBAJ_G0007392.1 mouse_genomes_project 9 108425859 108427440 + Gm28166 lincRNA lincRNA MGP_CBAJ_T0090814.1 MGP_CBAJ_G0034064.1 mouse_genomes_project 9 18531048 18532044 - MGP_CBAJ_P0090814 Olfr867 protein_coding protein_coding MGP_CBAJ_T0009119.1 MGP_CBAJ_G0007319.1 mouse_genomes_project 9 34607270 34608049 - Gm26662 lincRNA lincRNA MGP_CBAJ_T0005386.1 MGP_CBAJ_G0004549.1 mouse_genomes_project 9 73694459 73714186 - Gm15511 antisense antisense MGP_CBAJ_T0093009.1 MGP_CBAJ_G0034753.1 mouse_genomes_project 9 93117489 93131778 + MGP_CBAJ_P0093009 Prss35 protein_coding protein_coding MGP_CBAJ_T0093010.1 MGP_CBAJ_G0034753.1 mouse_genomes_project 9 93117489 93131949 + MGP_CBAJ_P0093010 Prss35 protein_coding protein_coding MGP_CBAJ_T0092592.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76444917 76727379 - MGP_CBAJ_P0092592 Tcf12 protein_coding protein_coding MGP_CBAJ_T0092593.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76446477 76501787 - Tcf12 protein_coding retained_intron MGP_CBAJ_T0092594.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76446493 76727353 - MGP_CBAJ_P0092594 Tcf12 protein_coding protein_coding MGP_CBAJ_T0092595.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76446498 76502097 - MGP_CBAJ_P0092595 Tcf12 protein_coding protein_coding MGP_CBAJ_T0092596.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76446502 76727338 - MGP_CBAJ_P0092596 Tcf12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092597.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76446961 76727182 - MGP_CBAJ_P0092597 Tcf12 protein_coding protein_coding MGP_CBAJ_T0092598.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76447750 76727403 - MGP_CBAJ_P0092598 Tcf12 protein_coding protein_coding MGP_CBAJ_T0092599.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76452134 76501790 - MGP_CBAJ_P0092599 Tcf12 protein_coding protein_coding MGP_CBAJ_T0092600.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76452137 76727344 - MGP_CBAJ_P0092600 Tcf12 protein_coding protein_coding MGP_CBAJ_T0092601.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76460786 76726733 - MGP_CBAJ_P0092601 Tcf12 protein_coding protein_coding MGP_CBAJ_T0092602.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76473975 76490461 - Tcf12 protein_coding processed_transcript MGP_CBAJ_T0092603.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76481741 76501686 - MGP_CBAJ_P0092603 Tcf12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092604.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76481741 76725301 - MGP_CBAJ_P0092604 Tcf12 protein_coding protein_coding MGP_CBAJ_T0092605.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76488481 76605966 - MGP_CBAJ_P0092605 Tcf12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092606.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76488871 76605964 - MGP_CBAJ_P0092606 Tcf12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092607.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76489492 76727303 - MGP_CBAJ_P0092607 Tcf12 protein_coding protein_coding MGP_CBAJ_T0092608.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76489513 76727131 - MGP_CBAJ_P0092608 Tcf12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092609.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76490186 76532292 - MGP_CBAJ_P0092609 Tcf12 protein_coding protein_coding MGP_CBAJ_T0092610.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76490964 76727323 - MGP_CBAJ_P0092610 Tcf12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092611.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76551813 76727379 - Tcf12 protein_coding retained_intron MGP_CBAJ_T0092612.1 MGP_CBAJ_G0034667.1 mouse_genomes_project 9 76721716 76726058 - Tcf12 protein_coding retained_intron MGP_CBAJ_T0015920.1 MGP_CBAJ_G0014032.1 mouse_genomes_project 9 117271996 117272360 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009164.1 MGP_CBAJ_G0007354.1 mouse_genomes_project 9 77482743 77488968 - lincRNA lincRNA MGP_CBAJ_T0091342.1 MGP_CBAJ_G0034267.1 mouse_genomes_project 9 39293052 39318125 + MGP_CBAJ_P0091342 Vwa5a protein_coding protein_coding MGP_CBAJ_T0091343.1 MGP_CBAJ_G0034267.1 mouse_genomes_project 9 39293056 39317541 + MGP_CBAJ_P0091343 Vwa5a protein_coding protein_coding MGP_CBAJ_T0091344.1 MGP_CBAJ_G0034267.1 mouse_genomes_project 9 39293846 39297435 + MGP_CBAJ_P0091344 Vwa5a protein_coding protein_coding MGP_CBAJ_T0091345.1 MGP_CBAJ_G0034267.1 mouse_genomes_project 9 39303226 39309487 + Vwa5a protein_coding retained_intron MGP_CBAJ_T0091346.1 MGP_CBAJ_G0034267.1 mouse_genomes_project 9 39309278 39310913 + Vwa5a protein_coding retained_intron MGP_CBAJ_T0091347.1 MGP_CBAJ_G0034267.1 mouse_genomes_project 9 39310753 39312757 + Vwa5a protein_coding retained_intron MGP_CBAJ_T0091348.1 MGP_CBAJ_G0034267.1 mouse_genomes_project 9 39310951 39316688 + MGP_CBAJ_P0091348 Vwa5a protein_coding nonsense_mediated_decay MGP_CBAJ_T0009153.1 MGP_CBAJ_G0007346.1 mouse_genomes_project 9 67667475 67671782 + 1110036E04Rik lincRNA lincRNA MGP_CBAJ_T0092831.1 MGP_CBAJ_G0034717.1 mouse_genomes_project 9 83762944 83771302 + MGP_CBAJ_P0092831 protein_coding protein_coding MGP_CBAJ_T0092832.1 MGP_CBAJ_G0034717.1 mouse_genomes_project 9 83769257 83771270 + MGP_CBAJ_P0092832 protein_coding protein_coding MGP_CBAJ_T0092833.1 MGP_CBAJ_G0034717.1 mouse_genomes_project 9 83769272 83771270 + protein_coding processed_transcript MGP_CBAJ_T0092838.1 MGP_CBAJ_G0034717.1 mouse_genomes_project 9 83769826 83770971 + MGP_CBAJ_P0092838 protein_coding protein_coding MGP_CBAJ_T0092840.1 MGP_CBAJ_G0034717.1 mouse_genomes_project 9 83770309 83771302 + MGP_CBAJ_P0092840 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091400.1 MGP_CBAJ_G0034313.1 mouse_genomes_project 9 40773631 40774628 + MGP_CBAJ_P0091400 Olfr981 protein_coding protein_coding MGP_CBAJ_T0009226.1 MGP_CBAJ_G0007404.1 mouse_genomes_project 9 116435150 116435602 + Gm38150 lincRNA lincRNA MGP_CBAJ_T0000317.1 MGP_CBAJ_G0000262.1 mouse_genomes_project 9 134328485 134328554 + mt-Ta Mt_tRNA Mt_tRNA MGP_CBAJ_T0002429.1 MGP_CBAJ_G0002341.1 mouse_genomes_project 9 119825116 119827531 - TEC TEC MGP_CBAJ_T0091384.1 MGP_CBAJ_G0034297.1 mouse_genomes_project 9 40324270 40325337 + MGP_CBAJ_P0091384 Olfr960 protein_coding protein_coding MGP_CBAJ_T0091863.1 MGP_CBAJ_G0034460.1 mouse_genomes_project 9 54936414 54942798 - MGP_CBAJ_P0091863 AI593442 protein_coding protein_coding MGP_CBAJ_T0093670.1 MGP_CBAJ_G0034888.1 mouse_genomes_project 9 115232085 115274969 - Iqcf3 protein_coding processed_transcript MGP_CBAJ_T0093672.1 MGP_CBAJ_G0034888.1 mouse_genomes_project 9 115273665 115306984 - MGP_CBAJ_P0093672 Iqcf3 protein_coding protein_coding MGP_CBAJ_T0093673.1 MGP_CBAJ_G0034888.1 mouse_genomes_project 9 115274074 115306982 - MGP_CBAJ_P0093673 Iqcf3 protein_coding protein_coding MGP_CBAJ_T0093674.1 MGP_CBAJ_G0034888.1 mouse_genomes_project 9 115289720 115306952 - MGP_CBAJ_P0093674 Iqcf3 protein_coding protein_coding MGP_CBAJ_T0093675.1 MGP_CBAJ_G0034888.1 mouse_genomes_project 9 115299123 115306952 - MGP_CBAJ_P0093675 Iqcf3 protein_coding protein_coding MGP_CBAJ_T0094572.1 MGP_CBAJ_G0035032.1 mouse_genomes_project 9 123874971 123929805 + MGP_CBAJ_P0094572 Ubp1 protein_coding protein_coding MGP_CBAJ_T0094573.1 MGP_CBAJ_G0035032.1 mouse_genomes_project 9 123874971 123929805 + MGP_CBAJ_P0094573 Ubp1 protein_coding protein_coding MGP_CBAJ_T0094574.1 MGP_CBAJ_G0035032.1 mouse_genomes_project 9 123878683 123926746 + MGP_CBAJ_P0094574 Ubp1 protein_coding protein_coding MGP_CBAJ_T0099621.1 MGP_CBAJ_G0037876.1 mouse_genomes_project 9 75015632 75015740 + Gm22229 snRNA snRNA MGP_CBAJ_T0093196.1 MGP_CBAJ_G0034793.1 mouse_genomes_project 9 103544560 103620290 + MGP_CBAJ_P0093196 Gk5 protein_coding protein_coding MGP_CBAJ_T0093197.1 MGP_CBAJ_G0034793.1 mouse_genomes_project 9 103544573 103624708 + MGP_CBAJ_P0093197 Gk5 protein_coding protein_coding MGP_CBAJ_T0093198.1 MGP_CBAJ_G0034793.1 mouse_genomes_project 9 103544630 103622910 + MGP_CBAJ_P0093198 Gk5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093199.1 MGP_CBAJ_G0034793.1 mouse_genomes_project 9 103549469 103570774 + Gk5 protein_coding processed_transcript MGP_CBAJ_T0093200.1 MGP_CBAJ_G0034793.1 mouse_genomes_project 9 103611010 103613562 + Gk5 protein_coding retained_intron MGP_CBAJ_T0015892.1 MGP_CBAJ_G0014004.1 mouse_genomes_project 9 104039870 104040564 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0091913.1 MGP_CBAJ_G0034481.1 mouse_genomes_project 9 57054615 57135465 - MGP_CBAJ_P0091913 Acsbg1 protein_coding protein_coding MGP_CBAJ_T0091914.1 MGP_CBAJ_G0034481.1 mouse_genomes_project 9 57090869 57114481 - MGP_CBAJ_P0091914 Acsbg1 protein_coding protein_coding MGP_CBAJ_T0091915.1 MGP_CBAJ_G0034481.1 mouse_genomes_project 9 57090895 57118679 - MGP_CBAJ_P0091915 Acsbg1 protein_coding protein_coding MGP_CBAJ_T0091916.1 MGP_CBAJ_G0034481.1 mouse_genomes_project 9 57090915 57135290 - MGP_CBAJ_P0091916 Acsbg1 protein_coding protein_coding MGP_CBAJ_T0091917.1 MGP_CBAJ_G0034481.1 mouse_genomes_project 9 57117515 57118550 - Acsbg1 protein_coding retained_intron MGP_CBAJ_T0005388.1 MGP_CBAJ_G0004551.1 mouse_genomes_project 9 74404459 74406026 - Gm28731 antisense antisense MGP_CBAJ_T0100881.1 MGP_CBAJ_G0039136.1 mouse_genomes_project 9 67818431 67818530 + Gm23136 snoRNA snoRNA MGP_CBAJ_T0091553.1 MGP_CBAJ_G0034368.1 mouse_genomes_project 9 45898821 45913240 - MGP_CBAJ_P0091553 Cxcr5 protein_coding protein_coding MGP_CBAJ_T0091554.1 MGP_CBAJ_G0034368.1 mouse_genomes_project 9 45898821 45947327 - MGP_CBAJ_P0091554 Cxcr5 protein_coding protein_coding MGP_CBAJ_T0011612.1 MGP_CBAJ_G0009750.1 mouse_genomes_project 9 81960466 81960759 - Gm23791 misc_RNA misc_RNA MGP_CBAJ_T0015818.1 MGP_CBAJ_G0013930.1 mouse_genomes_project 9 62909209 62909701 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100884.1 MGP_CBAJ_G0039139.1 mouse_genomes_project 9 69888428 69888560 - Gm22657 snoRNA snoRNA MGP_CBAJ_T0090866.1 MGP_CBAJ_G0034079.1 mouse_genomes_project 9 19249400 19316496 - MGP_CBAJ_P0090866 Olfm2 protein_coding unknown_likely_coding MGP_CBAJ_T0090867.1 MGP_CBAJ_G0034079.1 mouse_genomes_project 9 19249698 19317932 - MGP_CBAJ_P0090867 Olfm2 protein_coding protein_coding MGP_CBAJ_T0009205.1 MGP_CBAJ_G0007385.1 mouse_genomes_project 9 104605959 104634091 - Gm19325 lincRNA lincRNA MGP_CBAJ_T0091921.1 MGP_CBAJ_G0034483.1 mouse_genomes_project 9 57188467 57208205 - MGP_CBAJ_P0091921 Wdr61 protein_coding protein_coding MGP_CBAJ_T0091922.1 MGP_CBAJ_G0034483.1 mouse_genomes_project 9 57190883 57208215 - MGP_CBAJ_P0091922 Wdr61 protein_coding protein_coding MGP_CBAJ_T0091923.1 MGP_CBAJ_G0034483.1 mouse_genomes_project 9 57192947 57194542 - Wdr61 protein_coding retained_intron MGP_CBAJ_T0091924.1 MGP_CBAJ_G0034483.1 mouse_genomes_project 9 57196258 57198098 - Wdr61 protein_coding retained_intron MGP_CBAJ_T0091925.1 MGP_CBAJ_G0034483.1 mouse_genomes_project 9 57196608 57208225 - MGP_CBAJ_P0091925 Wdr61 protein_coding protein_coding MGP_CBAJ_T0094265.1 MGP_CBAJ_G0034976.1 mouse_genomes_project 9 118072828 118086372 - MGP_CBAJ_P0094265 Tma7 protein_coding protein_coding MGP_CBAJ_T0094266.1 MGP_CBAJ_G0034976.1 mouse_genomes_project 9 118076155 118086581 - MGP_CBAJ_P0094266 Tma7 protein_coding protein_coding MGP_CBAJ_T0094267.1 MGP_CBAJ_G0034976.1 mouse_genomes_project 9 118076452 118086372 - Tma7 protein_coding processed_transcript MGP_CBAJ_T0094268.1 MGP_CBAJ_G0034976.1 mouse_genomes_project 9 118086056 118086359 - Tma7 protein_coding retained_intron MGP_CBAJ_T0002425.1 MGP_CBAJ_G0002337.1 mouse_genomes_project 9 117859930 117860272 + TEC TEC MGP_CBAJ_T0090786.1 MGP_CBAJ_G0034036.1 mouse_genomes_project 9 17103091 17104145 - MGP_CBAJ_P0090786 Olfr24 protein_coding protein_coding MGP_CBAJ_T0009191.1 MGP_CBAJ_G0007376.1 mouse_genomes_project 9 98182016 98185293 + Gm28652 lincRNA lincRNA MGP_CBAJ_T0091979.1 MGP_CBAJ_G0034499.1 mouse_genomes_project 9 58583907 58594228 - MGP_CBAJ_P0091979 4930563M21Rik protein_coding protein_coding MGP_CBAJ_T0091209.1 MGP_CBAJ_G0034198.1 mouse_genomes_project 9 35849979 35851182 + MGP_CBAJ_P0091209 Gm17677 protein_coding protein_coding MGP_CBAJ_T0091240.1 MGP_CBAJ_G0034212.1 mouse_genomes_project 9 37065595 37083812 - MGP_CBAJ_P0091240 Ei24 protein_coding protein_coding MGP_CBAJ_T0091241.1 MGP_CBAJ_G0034212.1 mouse_genomes_project 9 37065595 37083729 - MGP_CBAJ_P0091241 Ei24 protein_coding protein_coding MGP_CBAJ_T0091242.1 MGP_CBAJ_G0034212.1 mouse_genomes_project 9 37066314 37069626 - Ei24 protein_coding retained_intron MGP_CBAJ_T0091243.1 MGP_CBAJ_G0034212.1 mouse_genomes_project 9 37066613 37069131 - Ei24 protein_coding retained_intron MGP_CBAJ_T0091244.1 MGP_CBAJ_G0034212.1 mouse_genomes_project 9 37069194 37072450 - Ei24 protein_coding retained_intron MGP_CBAJ_T0091245.1 MGP_CBAJ_G0034212.1 mouse_genomes_project 9 37072041 37083476 - MGP_CBAJ_P0091245 Ei24 protein_coding protein_coding MGP_CBAJ_T0091246.1 MGP_CBAJ_G0034212.1 mouse_genomes_project 9 37072050 37076708 - MGP_CBAJ_P0091246 Ei24 protein_coding protein_coding MGP_CBAJ_T0091247.1 MGP_CBAJ_G0034212.1 mouse_genomes_project 9 37072959 37083817 - MGP_CBAJ_P0091247 Ei24 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091667.1 MGP_CBAJ_G0034400.1 mouse_genomes_project 9 47499810 47516950 - MGP_CBAJ_P0091667 Sidt2 protein_coding protein_coding MGP_CBAJ_T0091668.1 MGP_CBAJ_G0034400.1 mouse_genomes_project 9 47499828 47516680 - MGP_CBAJ_P0091668 Sidt2 protein_coding protein_coding MGP_CBAJ_T0091669.1 MGP_CBAJ_G0034400.1 mouse_genomes_project 9 47501258 47503140 - MGP_CBAJ_P0091669 Sidt2 protein_coding protein_coding MGP_CBAJ_T0091670.1 MGP_CBAJ_G0034400.1 mouse_genomes_project 9 47504077 47506343 - Sidt2 protein_coding retained_intron MGP_CBAJ_T0091671.1 MGP_CBAJ_G0034400.1 mouse_genomes_project 9 47504505 47506745 - Sidt2 protein_coding retained_intron MGP_CBAJ_T0091672.1 MGP_CBAJ_G0034400.1 mouse_genomes_project 9 47505327 47508499 - MGP_CBAJ_P0091672 Sidt2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091673.1 MGP_CBAJ_G0034400.1 mouse_genomes_project 9 47506085 47509503 - Sidt2 protein_coding retained_intron MGP_CBAJ_T0091674.1 MGP_CBAJ_G0034400.1 mouse_genomes_project 9 47506914 47509967 - MGP_CBAJ_P0091674 Sidt2 protein_coding protein_coding MGP_CBAJ_T0091675.1 MGP_CBAJ_G0034400.1 mouse_genomes_project 9 47507002 47516884 - MGP_CBAJ_P0091675 Sidt2 protein_coding protein_coding MGP_CBAJ_T0091676.1 MGP_CBAJ_G0034400.1 mouse_genomes_project 9 47507064 47513534 - MGP_CBAJ_P0091676 Sidt2 protein_coding protein_coding MGP_CBAJ_T0091677.1 MGP_CBAJ_G0034400.1 mouse_genomes_project 9 47507380 47513475 - MGP_CBAJ_P0091677 Sidt2 protein_coding protein_coding MGP_CBAJ_T0091678.1 MGP_CBAJ_G0034400.1 mouse_genomes_project 9 47507417 47513707 - MGP_CBAJ_P0091678 Sidt2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091679.1 MGP_CBAJ_G0034400.1 mouse_genomes_project 9 47507452 47510019 - MGP_CBAJ_P0091679 Sidt2 protein_coding protein_coding MGP_CBAJ_T0091680.1 MGP_CBAJ_G0034400.1 mouse_genomes_project 9 47514143 47516937 - Sidt2 protein_coding retained_intron MGP_CBAJ_T0015856.1 MGP_CBAJ_G0013968.1 mouse_genomes_project 9 88121376 88122128 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0092213.1 MGP_CBAJ_G0034568.1 mouse_genomes_project 9 64637132 64683256 + MGP_CBAJ_P0092213 Tle3 protein_coding protein_coding MGP_CBAJ_T0092214.1 MGP_CBAJ_G0034568.1 mouse_genomes_project 9 64637149 64682665 + MGP_CBAJ_P0092214 Tle3 protein_coding protein_coding MGP_CBAJ_T0092215.1 MGP_CBAJ_G0034568.1 mouse_genomes_project 9 64637625 64683246 + MGP_CBAJ_P0092215 Tle3 protein_coding protein_coding MGP_CBAJ_T0092216.1 MGP_CBAJ_G0034568.1 mouse_genomes_project 9 64638148 64674121 + MGP_CBAJ_P0092216 Tle3 protein_coding protein_coding MGP_CBAJ_T0092217.1 MGP_CBAJ_G0034568.1 mouse_genomes_project 9 64638152 64682597 + MGP_CBAJ_P0092217 Tle3 protein_coding protein_coding MGP_CBAJ_T0092218.1 MGP_CBAJ_G0034568.1 mouse_genomes_project 9 64638183 64672195 + MGP_CBAJ_P0092218 Tle3 protein_coding protein_coding MGP_CBAJ_T0092219.1 MGP_CBAJ_G0034568.1 mouse_genomes_project 9 64638205 64681476 + MGP_CBAJ_P0092219 Tle3 protein_coding protein_coding MGP_CBAJ_T0092220.1 MGP_CBAJ_G0034568.1 mouse_genomes_project 9 64638205 64681476 + MGP_CBAJ_P0092220 Tle3 protein_coding protein_coding MGP_CBAJ_T0092221.1 MGP_CBAJ_G0034568.1 mouse_genomes_project 9 64638205 64681476 + MGP_CBAJ_P0092221 Tle3 protein_coding protein_coding MGP_CBAJ_T0092222.1 MGP_CBAJ_G0034568.1 mouse_genomes_project 9 64638249 64666637 + MGP_CBAJ_P0092222 Tle3 protein_coding protein_coding MGP_CBAJ_T0092223.1 MGP_CBAJ_G0034568.1 mouse_genomes_project 9 64638281 64681736 + MGP_CBAJ_P0092223 Tle3 protein_coding protein_coding MGP_CBAJ_T0092224.1 MGP_CBAJ_G0034568.1 mouse_genomes_project 9 64639096 64659382 + MGP_CBAJ_P0092224 Tle3 protein_coding protein_coding MGP_CBAJ_T0092225.1 MGP_CBAJ_G0034568.1 mouse_genomes_project 9 64640288 64681736 + MGP_CBAJ_P0092225 Tle3 protein_coding protein_coding MGP_CBAJ_T0092226.1 MGP_CBAJ_G0034568.1 mouse_genomes_project 9 64666603 64674890 + Tle3 protein_coding processed_transcript MGP_CBAJ_T0092227.1 MGP_CBAJ_G0034568.1 mouse_genomes_project 9 64667205 64682595 + Tle3 protein_coding retained_intron MGP_CBAJ_T0092228.1 MGP_CBAJ_G0034568.1 mouse_genomes_project 9 64674692 64683178 + Tle3 protein_coding processed_transcript MGP_CBAJ_T0091274.1 MGP_CBAJ_G0034218.1 mouse_genomes_project 9 37733526 37755708 + MGP_CBAJ_P0091274 Hepacam protein_coding protein_coding MGP_CBAJ_T0015934.1 MGP_CBAJ_G0014046.1 mouse_genomes_project 9 135083535 135083809 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009240.1 MGP_CBAJ_G0007413.1 mouse_genomes_project 9 128457364 128465423 + Gm26614 lincRNA lincRNA MGP_CBAJ_T0002324.1 MGP_CBAJ_G0002237.1 mouse_genomes_project 9 76442226 76443966 - TEC TEC MGP_CBAJ_T0094457.1 MGP_CBAJ_G0035013.1 mouse_genomes_project 9 120449240 120466758 - MGP_CBAJ_P0094457 Tmie protein_coding protein_coding MGP_CBAJ_T0094458.1 MGP_CBAJ_G0035013.1 mouse_genomes_project 9 120462076 120465952 - Tmie protein_coding processed_transcript MGP_CBAJ_T0094459.1 MGP_CBAJ_G0035013.1 mouse_genomes_project 9 120462124 120462670 - Tmie protein_coding retained_intron MGP_CBAJ_T0009206.1 MGP_CBAJ_G0007386.1 mouse_genomes_project 9 104634966 104676208 + lincRNA lincRNA MGP_CBAJ_T0002393.1 MGP_CBAJ_G0002305.1 mouse_genomes_project 9 109171502 109173104 + TEC TEC MGP_CBAJ_T0099627.1 MGP_CBAJ_G0037882.1 mouse_genomes_project 9 88386875 88386936 - Gm22836 snRNA snRNA MGP_CBAJ_T0091287.1 MGP_CBAJ_G0034222.1 mouse_genomes_project 9 37925475 37935722 + MGP_CBAJ_P0091287 Esam protein_coding protein_coding MGP_CBAJ_T0091288.1 MGP_CBAJ_G0034222.1 mouse_genomes_project 9 37926178 37934539 + MGP_CBAJ_P0091288 Esam protein_coding protein_coding MGP_CBAJ_T0091289.1 MGP_CBAJ_G0034222.1 mouse_genomes_project 9 37927652 37929044 + MGP_CBAJ_P0091289 Esam protein_coding protein_coding MGP_CBAJ_T0091290.1 MGP_CBAJ_G0034222.1 mouse_genomes_project 9 37928326 37931610 + MGP_CBAJ_P0091290 Esam protein_coding protein_coding MGP_CBAJ_T0091291.1 MGP_CBAJ_G0034222.1 mouse_genomes_project 9 37933676 37934895 + Esam protein_coding retained_intron MGP_CBAJ_T0094269.1 MGP_CBAJ_G0034977.1 mouse_genomes_project 9 118086486 118096594 + MGP_CBAJ_P0094269 Ccdc51 protein_coding protein_coding MGP_CBAJ_T0092847.1 MGP_CBAJ_G0034724.1 mouse_genomes_project 9 83945835 83946757 - MGP_CBAJ_P0092847 Gm17324 protein_coding protein_coding MGP_CBAJ_T0018267.1 MGP_CBAJ_G0015477.1 mouse_genomes_project 9 45417625 45419285 - Gm20444 processed_transcript processed_transcript MGP_CBAJ_T0092347.1 MGP_CBAJ_G0034601.1 mouse_genomes_project 9 68757464 68800616 - MGP_CBAJ_P0092347 Hacd3 protein_coding protein_coding MGP_CBAJ_T0018238.1 MGP_CBAJ_G0015470.1 mouse_genomes_project 9 5189815 5200982 + Gm20416 processed_transcript processed_transcript MGP_CBAJ_T0015919.1 MGP_CBAJ_G0014031.1 mouse_genomes_project 9 117071056 117071537 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002399.1 MGP_CBAJ_G0002311.1 mouse_genomes_project 9 110061590 110064000 - TEC TEC MGP_CBAJ_T0094877.1 MGP_CBAJ_G0035135.1 mouse_genomes_project 9 135113354 135177445 - MGP_CBAJ_P0094877 Fyco1 protein_coding protein_coding MGP_CBAJ_T0094878.1 MGP_CBAJ_G0035135.1 mouse_genomes_project 9 135113730 135177112 - MGP_CBAJ_P0094878 Fyco1 protein_coding protein_coding MGP_CBAJ_T0094880.1 MGP_CBAJ_G0035135.1 mouse_genomes_project 9 135153744 135177427 - MGP_CBAJ_P0094880 Fyco1 protein_coding protein_coding MGP_CBAJ_T0094881.1 MGP_CBAJ_G0035135.1 mouse_genomes_project 9 135163727 135177432 - Fyco1 protein_coding retained_intron MGP_CBAJ_T0091084.1 MGP_CBAJ_G0034165.1 mouse_genomes_project 9 28417637 29449665 - MGP_CBAJ_P0091084 Ntm protein_coding protein_coding MGP_CBAJ_T0091085.1 MGP_CBAJ_G0034165.1 mouse_genomes_project 9 28418874 28854687 - MGP_CBAJ_P0091085 Ntm protein_coding protein_coding MGP_CBAJ_T0091086.1 MGP_CBAJ_G0034165.1 mouse_genomes_project 9 28419093 28437500 - MGP_CBAJ_P0091086 Ntm protein_coding protein_coding MGP_CBAJ_T0091087.1 MGP_CBAJ_G0034165.1 mouse_genomes_project 9 28419355 28437500 - MGP_CBAJ_P0091087 Ntm protein_coding protein_coding MGP_CBAJ_T0091088.1 MGP_CBAJ_G0034165.1 mouse_genomes_project 9 28432338 28854219 - MGP_CBAJ_P0091088 Ntm protein_coding protein_coding MGP_CBAJ_T0091089.1 MGP_CBAJ_G0034165.1 mouse_genomes_project 9 28432464 28623760 - Ntm protein_coding processed_transcript MGP_CBAJ_T0091090.1 MGP_CBAJ_G0034165.1 mouse_genomes_project 9 28432487 28541724 - Ntm protein_coding processed_transcript MGP_CBAJ_T0091091.1 MGP_CBAJ_G0034165.1 mouse_genomes_project 9 28436478 29449666 - Ntm protein_coding retained_intron MGP_CBAJ_T0091092.1 MGP_CBAJ_G0034165.1 mouse_genomes_project 9 28614542 29449666 - Ntm protein_coding retained_intron MGP_CBAJ_T0091093.1 MGP_CBAJ_G0034165.1 mouse_genomes_project 9 28854070 29449655 - Ntm protein_coding processed_transcript MGP_CBAJ_T0091094.1 MGP_CBAJ_G0034165.1 mouse_genomes_project 9 29425927 29449677 - Ntm protein_coding processed_transcript MGP_CBAJ_T0091891.1 MGP_CBAJ_G0034469.1 mouse_genomes_project 9 56035439 56066296 - MGP_CBAJ_P0091891 Rab39 protein_coding protein_coding MGP_CBAJ_T0093340.1 MGP_CBAJ_G0034828.1 mouse_genomes_project 9 108435790 108469785 - MGP_CBAJ_P0093340 Il20rb protein_coding protein_coding MGP_CBAJ_T0093341.1 MGP_CBAJ_G0034828.1 mouse_genomes_project 9 108435792 108446540 - Il20rb protein_coding retained_intron MGP_CBAJ_T0093342.1 MGP_CBAJ_G0034828.1 mouse_genomes_project 9 108435875 108439878 - Il20rb protein_coding processed_transcript MGP_CBAJ_T0093343.1 MGP_CBAJ_G0034828.1 mouse_genomes_project 9 108436632 108439850 - Il20rb protein_coding retained_intron MGP_CBAJ_T0093344.1 MGP_CBAJ_G0034828.1 mouse_genomes_project 9 108437178 108450239 - Il20rb protein_coding processed_transcript MGP_CBAJ_T0093345.1 MGP_CBAJ_G0034828.1 mouse_genomes_project 9 108445372 108469382 - Il20rb protein_coding retained_intron MGP_CBAJ_T0092123.1 MGP_CBAJ_G0034543.1 mouse_genomes_project 9 61258707 61287331 - MGP_CBAJ_P0092123 Loxl1 protein_coding protein_coding MGP_CBAJ_T0090819.1 MGP_CBAJ_G0034069.1 mouse_genomes_project 9 18846574 18847636 + MGP_CBAJ_P0090819 Olfr873 protein_coding protein_coding MGP_CBAJ_T0093039.1 MGP_CBAJ_G0034761.1 mouse_genomes_project 9 94871168 94940101 - MGP_CBAJ_P0093039 Snx14 protein_coding protein_coding MGP_CBAJ_T0093040.1 MGP_CBAJ_G0034761.1 mouse_genomes_project 9 94871170 94894230 - Snx14 protein_coding retained_intron MGP_CBAJ_T0093041.1 MGP_CBAJ_G0034761.1 mouse_genomes_project 9 94871170 94940048 - MGP_CBAJ_P0093041 Snx14 protein_coding protein_coding MGP_CBAJ_T0093042.1 MGP_CBAJ_G0034761.1 mouse_genomes_project 9 94871182 94940108 - MGP_CBAJ_P0093042 Snx14 protein_coding protein_coding MGP_CBAJ_T0093043.1 MGP_CBAJ_G0034761.1 mouse_genomes_project 9 94871185 94940064 - MGP_CBAJ_P0093043 Snx14 protein_coding protein_coding MGP_CBAJ_T0093044.1 MGP_CBAJ_G0034761.1 mouse_genomes_project 9 94875991 94940079 - MGP_CBAJ_P0093044 Snx14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093045.1 MGP_CBAJ_G0034761.1 mouse_genomes_project 9 94887782 94890094 - Snx14 protein_coding retained_intron MGP_CBAJ_T0093047.1 MGP_CBAJ_G0034761.1 mouse_genomes_project 9 94921051 94940062 - Snx14 protein_coding retained_intron MGP_CBAJ_T0090667.1 MGP_CBAJ_G0033997.1 mouse_genomes_project 9 11056628 11095621 + MGP_CBAJ_P0090667 Ccdc82 protein_coding protein_coding MGP_CBAJ_T0090668.1 MGP_CBAJ_G0033997.1 mouse_genomes_project 9 11056641 11063208 + MGP_CBAJ_P0090668 Ccdc82 protein_coding protein_coding MGP_CBAJ_T0091222.1 MGP_CBAJ_G0034209.1 mouse_genomes_project 9 36947226 36952854 + MGP_CBAJ_P0091222 Acrv1 protein_coding protein_coding MGP_CBAJ_T0091223.1 MGP_CBAJ_G0034209.1 mouse_genomes_project 9 36947260 36951376 + Acrv1 protein_coding retained_intron MGP_CBAJ_T0009110.1 MGP_CBAJ_G0007310.1 mouse_genomes_project 9 24298888 24322765 + Gm29642 lincRNA lincRNA MGP_CBAJ_T0010974.1 MGP_CBAJ_G0009112.1 mouse_genomes_project 9 119768032 119768146 + miRNA miRNA MGP_CBAJ_T0100893.1 MGP_CBAJ_G0039148.1 mouse_genomes_project 9 88166818 88166949 + Gm23748 snoRNA snoRNA MGP_CBAJ_T0094772.1 MGP_CBAJ_G0035099.1 mouse_genomes_project 9 132777664 132815170 + MGP_CBAJ_P0094772 Nktr protein_coding protein_coding MGP_CBAJ_T0094773.1 MGP_CBAJ_G0035099.1 mouse_genomes_project 9 132777666 132800956 + MGP_CBAJ_P0094773 Nktr protein_coding nonsense_mediated_decay MGP_CBAJ_T0094774.1 MGP_CBAJ_G0035099.1 mouse_genomes_project 9 132777692 132789766 + MGP_CBAJ_P0094774 Nktr protein_coding unknown_likely_coding MGP_CBAJ_T0094775.1 MGP_CBAJ_G0035099.1 mouse_genomes_project 9 132777703 132799434 + MGP_CBAJ_P0094775 Nktr protein_coding protein_coding MGP_CBAJ_T0094776.1 MGP_CBAJ_G0035099.1 mouse_genomes_project 9 132777705 132788298 + Nktr protein_coding retained_intron MGP_CBAJ_T0094777.1 MGP_CBAJ_G0035099.1 mouse_genomes_project 9 132777731 132793744 + Nktr protein_coding retained_intron MGP_CBAJ_T0094778.1 MGP_CBAJ_G0035099.1 mouse_genomes_project 9 132777786 132778454 + Nktr protein_coding processed_transcript MGP_CBAJ_T0094779.1 MGP_CBAJ_G0035099.1 mouse_genomes_project 9 132777887 132808174 + MGP_CBAJ_P0094779 Nktr protein_coding protein_coding MGP_CBAJ_T0094780.1 MGP_CBAJ_G0035099.1 mouse_genomes_project 9 132778264 132789800 + MGP_CBAJ_P0094780 Nktr protein_coding protein_coding MGP_CBAJ_T0094781.1 MGP_CBAJ_G0035099.1 mouse_genomes_project 9 132787682 132789868 + Nktr protein_coding retained_intron MGP_CBAJ_T0094782.1 MGP_CBAJ_G0035099.1 mouse_genomes_project 9 132789431 132800992 + Nktr protein_coding retained_intron MGP_CBAJ_T0094783.1 MGP_CBAJ_G0035099.1 mouse_genomes_project 9 132809119 132812724 + MGP_CBAJ_P0094783 Nktr protein_coding nonsense_mediated_decay MGP_CBAJ_T0094784.1 MGP_CBAJ_G0035099.1 mouse_genomes_project 9 132809548 132810966 + Nktr protein_coding retained_intron MGP_CBAJ_T0094785.1 MGP_CBAJ_G0035099.1 mouse_genomes_project 9 132810000 132813185 + MGP_CBAJ_P0094785 Nktr protein_coding protein_coding MGP_CBAJ_T0094786.1 MGP_CBAJ_G0035099.1 mouse_genomes_project 9 132810845 132812684 + Nktr protein_coding retained_intron MGP_CBAJ_T0015791.1 MGP_CBAJ_G0013903.1 mouse_genomes_project 9 12638628 12639156 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002343.1 MGP_CBAJ_G0002256.1 mouse_genomes_project 9 77633695 77637956 + TEC TEC MGP_CBAJ_T0099623.1 MGP_CBAJ_G0037878.1 mouse_genomes_project 9 76886649 76886753 - Gm25163 snRNA snRNA MGP_CBAJ_T0100853.1 MGP_CBAJ_G0039108.1 mouse_genomes_project 9 13294631 13294764 + snoRNA snoRNA MGP_CBAJ_T0010963.1 MGP_CBAJ_G0009101.1 mouse_genomes_project 9 114787249 114787339 + Mir135a-1 miRNA miRNA MGP_CBAJ_T0092185.1 MGP_CBAJ_G0034562.1 mouse_genomes_project 9 63115955 63133797 - Nr2e3 protein_coding retained_intron MGP_CBAJ_T0092186.1 MGP_CBAJ_G0034562.1 mouse_genomes_project 9 63115955 63123229 - Nr2e3 protein_coding retained_intron MGP_CBAJ_T0092187.1 MGP_CBAJ_G0034562.1 mouse_genomes_project 9 63115955 63123312 - MGP_CBAJ_P0092187 Nr2e3 protein_coding protein_coding MGP_CBAJ_T0092188.1 MGP_CBAJ_G0034562.1 mouse_genomes_project 9 63116171 63123305 - Nr2e3 protein_coding retained_intron MGP_CBAJ_T0092189.1 MGP_CBAJ_G0034562.1 mouse_genomes_project 9 63116312 63123269 - Nr2e3 protein_coding retained_intron MGP_CBAJ_T0092190.1 MGP_CBAJ_G0034562.1 mouse_genomes_project 9 63119948 63121990 - Nr2e3 protein_coding retained_intron MGP_CBAJ_T0092191.1 MGP_CBAJ_G0034562.1 mouse_genomes_project 9 63120569 63122593 - Nr2e3 protein_coding processed_transcript MGP_CBAJ_T0092192.1 MGP_CBAJ_G0034562.1 mouse_genomes_project 9 63121796 63133793 - Nr2e3 protein_coding processed_transcript MGP_CBAJ_T0092193.1 MGP_CBAJ_G0034562.1 mouse_genomes_project 9 63121916 63123269 - Nr2e3 protein_coding retained_intron MGP_CBAJ_T0091801.1 MGP_CBAJ_G0034443.1 mouse_genomes_project 9 52841934 52843215 - MGP_CBAJ_P0091801 Hspb2 protein_coding protein_coding MGP_CBAJ_T0002387.1 MGP_CBAJ_G0002299.1 mouse_genomes_project 9 107091148 107094017 + TEC TEC MGP_CBAJ_T0091897.1 MGP_CBAJ_G0034474.1 mouse_genomes_project 9 56423841 56471340 - MGP_CBAJ_P0091897 Tnfaip8l3 protein_coding protein_coding MGP_CBAJ_T0100864.1 MGP_CBAJ_G0039119.1 mouse_genomes_project 9 35206262 35206406 + Gm24262 snoRNA snoRNA MGP_CBAJ_T0009227.1 MGP_CBAJ_G0007405.1 mouse_genomes_project 9 117555782 117557422 + 4833445I07Rik lincRNA lincRNA MGP_CBAJ_T0009228.1 MGP_CBAJ_G0007405.1 mouse_genomes_project 9 117556142 117557022 + 4833445I07Rik lincRNA lincRNA MGP_CBAJ_T0090787.1 MGP_CBAJ_G0034037.1 mouse_genomes_project 9 17173702 17174641 - MGP_CBAJ_P0090787 Olfr828 protein_coding protein_coding MGP_CBAJ_T0093691.1 MGP_CBAJ_G0034894.1 mouse_genomes_project 9 115451752 115580017 - MGP_CBAJ_P0093691 Rad54l2 protein_coding protein_coding MGP_CBAJ_T0093692.1 MGP_CBAJ_G0034894.1 mouse_genomes_project 9 115452460 115456960 - MGP_CBAJ_P0093692 Rad54l2 protein_coding protein_coding MGP_CBAJ_T0093693.1 MGP_CBAJ_G0034894.1 mouse_genomes_project 9 115490476 115491430 - MGP_CBAJ_P0093693 Rad54l2 protein_coding protein_coding MGP_CBAJ_T0093694.1 MGP_CBAJ_G0034894.1 mouse_genomes_project 9 115577581 115579999 - Rad54l2 protein_coding retained_intron MGP_CBAJ_T0091803.1 MGP_CBAJ_G0034445.1 mouse_genomes_project 9 52854818 52857217 - MGP_CBAJ_P0091803 1110032A03Rik protein_coding protein_coding MGP_CBAJ_T0091804.1 MGP_CBAJ_G0034445.1 mouse_genomes_project 9 52854840 52868687 - 1110032A03Rik protein_coding retained_intron MGP_CBAJ_T0091805.1 MGP_CBAJ_G0034445.1 mouse_genomes_project 9 52854843 52855676 - 1110032A03Rik protein_coding retained_intron MGP_CBAJ_T0091806.1 MGP_CBAJ_G0034445.1 mouse_genomes_project 9 52854969 52858999 - MGP_CBAJ_P0091806 1110032A03Rik protein_coding protein_coding MGP_CBAJ_T0091807.1 MGP_CBAJ_G0034445.1 mouse_genomes_project 9 52854970 52859260 - MGP_CBAJ_P0091807 1110032A03Rik protein_coding protein_coding MGP_CBAJ_T0091808.1 MGP_CBAJ_G0034445.1 mouse_genomes_project 9 52855811 52859198 - 1110032A03Rik protein_coding processed_transcript MGP_CBAJ_T0091809.1 MGP_CBAJ_G0034445.1 mouse_genomes_project 9 52855925 52859269 - 1110032A03Rik protein_coding processed_transcript MGP_CBAJ_T0091813.1 MGP_CBAJ_G0034445.1 mouse_genomes_project 9 52859693 52862042 - 1110032A03Rik protein_coding processed_transcript MGP_CBAJ_T0093661.1 MGP_CBAJ_G0034886.1 mouse_genomes_project 9 115204897 115210671 + Rrp9 protein_coding processed_transcript MGP_CBAJ_T0093662.1 MGP_CBAJ_G0034886.1 mouse_genomes_project 9 115206203 115214200 + MGP_CBAJ_P0093662 Rrp9 protein_coding protein_coding MGP_CBAJ_T0093663.1 MGP_CBAJ_G0034886.1 mouse_genomes_project 9 115206252 115214192 + Rrp9 protein_coding retained_intron MGP_CBAJ_T0093664.1 MGP_CBAJ_G0034886.1 mouse_genomes_project 9 115206264 115206924 + Rrp9 protein_coding retained_intron MGP_CBAJ_T0093665.1 MGP_CBAJ_G0034886.1 mouse_genomes_project 9 115209597 115210440 + Rrp9 protein_coding retained_intron MGP_CBAJ_T0093666.1 MGP_CBAJ_G0034886.1 mouse_genomes_project 9 115212629 115214198 + MGP_CBAJ_P0093666 Rrp9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093667.1 MGP_CBAJ_G0034886.1 mouse_genomes_project 9 115213239 115214200 + Rrp9 protein_coding retained_intron MGP_CBAJ_T0091374.1 MGP_CBAJ_G0034293.1 mouse_genomes_project 9 40247299 40248241 - MGP_CBAJ_P0091374 Olfr958 protein_coding protein_coding MGP_CBAJ_T0005329.1 MGP_CBAJ_G0004513.1 mouse_genomes_project 9 6600238 6629249 + Gm16833 antisense antisense MGP_CBAJ_T0005330.1 MGP_CBAJ_G0004513.1 mouse_genomes_project 9 6629048 6629249 + Gm16833 antisense antisense MGP_CBAJ_T0015899.1 MGP_CBAJ_G0014011.1 mouse_genomes_project 9 107007145 107007665 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0092417.1 MGP_CBAJ_G0034625.1 mouse_genomes_project 9 70006495 70011051 - MGP_CBAJ_P0092417 Snx22 protein_coding protein_coding MGP_CBAJ_T0091836.1 MGP_CBAJ_G0034449.1 mouse_genomes_project 9 53010402 53130984 - MGP_CBAJ_P0091836 Sik2 protein_coding protein_coding MGP_CBAJ_T0091837.1 MGP_CBAJ_G0034449.1 mouse_genomes_project 9 53010402 53130884 - MGP_CBAJ_P0091837 Sik2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091838.1 MGP_CBAJ_G0034449.1 mouse_genomes_project 9 53010402 53130847 - MGP_CBAJ_P0091838 Sik2 protein_coding protein_coding MGP_CBAJ_T0091839.1 MGP_CBAJ_G0034449.1 mouse_genomes_project 9 53010402 53130847 - MGP_CBAJ_P0091839 Sik2 protein_coding protein_coding MGP_CBAJ_T0091840.1 MGP_CBAJ_G0034449.1 mouse_genomes_project 9 53047467 53130937 - Sik2 protein_coding processed_transcript MGP_CBAJ_T0091841.1 MGP_CBAJ_G0034449.1 mouse_genomes_project 9 53049765 53130895 - Sik2 protein_coding processed_transcript MGP_CBAJ_T0091842.1 MGP_CBAJ_G0034449.1 mouse_genomes_project 9 53053039 53130911 - Sik2 protein_coding retained_intron MGP_CBAJ_T0091843.1 MGP_CBAJ_G0034449.1 mouse_genomes_project 9 53117500 53130922 - Sik2 protein_coding retained_intron MGP_CBAJ_T0090624.1 MGP_CBAJ_G0033984.1 mouse_genomes_project 9 4921814 4951916 + MGP_CBAJ_P0090624 Tmem123 protein_coding protein_coding MGP_CBAJ_T0090625.1 MGP_CBAJ_G0033984.1 mouse_genomes_project 9 4921922 4948631 + MGP_CBAJ_P0090625 Tmem123 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090626.1 MGP_CBAJ_G0033984.1 mouse_genomes_project 9 4921938 4951911 + MGP_CBAJ_P0090626 Tmem123 protein_coding nonsense_mediated_decay MGP_CBAJ_T0009178.1 MGP_CBAJ_G0007367.1 mouse_genomes_project 9 88180112 88184135 + 1700063H06Rik lincRNA lincRNA MGP_CBAJ_T0092147.1 MGP_CBAJ_G0034550.1 mouse_genomes_project 9 61890208 62058393 - MGP_CBAJ_P0092147 Neo1 protein_coding protein_coding MGP_CBAJ_T0092148.1 MGP_CBAJ_G0034550.1 mouse_genomes_project 9 61890360 62058107 - MGP_CBAJ_P0092148 Neo1 protein_coding unknown_likely_coding MGP_CBAJ_T0093653.1 MGP_CBAJ_G0034885.1 mouse_genomes_project 9 115199278 115205884 - MGP_CBAJ_P0093653 Parp3 protein_coding protein_coding MGP_CBAJ_T0093654.1 MGP_CBAJ_G0034885.1 mouse_genomes_project 9 115199579 115205311 - MGP_CBAJ_P0093654 Parp3 protein_coding protein_coding MGP_CBAJ_T0093655.1 MGP_CBAJ_G0034885.1 mouse_genomes_project 9 115199941 115205104 - Parp3 protein_coding retained_intron MGP_CBAJ_T0093656.1 MGP_CBAJ_G0034885.1 mouse_genomes_project 9 115199941 115205604 - MGP_CBAJ_P0093656 Parp3 protein_coding protein_coding MGP_CBAJ_T0093657.1 MGP_CBAJ_G0034885.1 mouse_genomes_project 9 115199947 115200971 - Parp3 protein_coding retained_intron MGP_CBAJ_T0093658.1 MGP_CBAJ_G0034885.1 mouse_genomes_project 9 115203356 115205039 - MGP_CBAJ_P0093658 Parp3 protein_coding protein_coding MGP_CBAJ_T0093659.1 MGP_CBAJ_G0034885.1 mouse_genomes_project 9 115203563 115205531 - Parp3 protein_coding retained_intron MGP_CBAJ_T0093660.1 MGP_CBAJ_G0034885.1 mouse_genomes_project 9 115203593 115205330 - MGP_CBAJ_P0093660 Parp3 protein_coding protein_coding MGP_CBAJ_T0092239.1 MGP_CBAJ_G0034573.1 mouse_genomes_project 9 65653074 65666604 - MGP_CBAJ_P0092239 Spesp1 protein_coding protein_coding MGP_CBAJ_T0093311.1 MGP_CBAJ_G0034821.1 mouse_genomes_project 9 107189196 107243527 - MGP_CBAJ_P0093311 Mras protein_coding protein_coding MGP_CBAJ_T0093312.1 MGP_CBAJ_G0034821.1 mouse_genomes_project 9 107191703 107243027 - MGP_CBAJ_P0093312 Mras protein_coding protein_coding MGP_CBAJ_T0093313.1 MGP_CBAJ_G0034821.1 mouse_genomes_project 9 107191754 107232019 - MGP_CBAJ_P0093313 Mras protein_coding protein_coding MGP_CBAJ_T0093314.1 MGP_CBAJ_G0034821.1 mouse_genomes_project 9 107193508 107198471 - Mras protein_coding retained_intron MGP_CBAJ_T0093315.1 MGP_CBAJ_G0034821.1 mouse_genomes_project 9 107196615 107205061 - Mras protein_coding retained_intron MGP_CBAJ_T0093316.1 MGP_CBAJ_G0034821.1 mouse_genomes_project 9 107196776 107226277 - MGP_CBAJ_P0093316 Mras protein_coding protein_coding MGP_CBAJ_T0010966.1 MGP_CBAJ_G0009104.1 mouse_genomes_project 9 116980346 116980432 + Mir7088 miRNA miRNA MGP_CBAJ_T0091703.1 MGP_CBAJ_G0034408.1 mouse_genomes_project 9 47888212 47905634 + Bud13 protein_coding retained_intron MGP_CBAJ_T0091704.1 MGP_CBAJ_G0034408.1 mouse_genomes_project 9 47888212 47910292 + MGP_CBAJ_P0091704 Bud13 protein_coding protein_coding MGP_CBAJ_T0091705.1 MGP_CBAJ_G0034408.1 mouse_genomes_project 9 47895923 47910292 + MGP_CBAJ_P0091705 Bud13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091706.1 MGP_CBAJ_G0034408.1 mouse_genomes_project 9 47895945 47898218 + Bud13 protein_coding retained_intron MGP_CBAJ_T0100916.1 MGP_CBAJ_G0039171.1 mouse_genomes_project 9 130106133 130106262 - Gm22729 snoRNA snoRNA MGP_CBAJ_T0093478.1 MGP_CBAJ_G0034855.1 mouse_genomes_project 9 112384235 112430852 + MGP_CBAJ_P0093478 Gm28305 protein_coding protein_coding MGP_CBAJ_T0092797.1 MGP_CBAJ_G0034706.1 mouse_genomes_project 9 82717549 82844145 - MGP_CBAJ_P0092797 Lrrc1 protein_coding protein_coding MGP_CBAJ_T0092798.1 MGP_CBAJ_G0034706.1 mouse_genomes_project 9 82717707 82843370 - MGP_CBAJ_P0092798 Lrrc1 protein_coding protein_coding MGP_CBAJ_T0092799.1 MGP_CBAJ_G0034706.1 mouse_genomes_project 9 82717801 82735375 - Lrrc1 protein_coding processed_transcript MGP_CBAJ_T0092800.1 MGP_CBAJ_G0034706.1 mouse_genomes_project 9 82717816 82728883 - MGP_CBAJ_P0092800 Lrrc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092801.1 MGP_CBAJ_G0034706.1 mouse_genomes_project 9 82721780 82729179 - Lrrc1 protein_coding retained_intron MGP_CBAJ_T0092802.1 MGP_CBAJ_G0034706.1 mouse_genomes_project 9 82735380 82844125 - MGP_CBAJ_P0092802 Lrrc1 protein_coding protein_coding MGP_CBAJ_T0092803.1 MGP_CBAJ_G0034706.1 mouse_genomes_project 9 82744747 82793209 - Lrrc1 protein_coding processed_transcript MGP_CBAJ_T0092804.1 MGP_CBAJ_G0034706.1 mouse_genomes_project 9 82758785 82844123 - Lrrc1 protein_coding processed_transcript MGP_CBAJ_T0092805.1 MGP_CBAJ_G0034706.1 mouse_genomes_project 9 82839788 82844065 - Lrrc1 protein_coding retained_intron MGP_CBAJ_T0094009.1 MGP_CBAJ_G0034939.1 mouse_genomes_project 9 117122239 117190275 - MGP_CBAJ_P0094009 Dag1 protein_coding protein_coding MGP_CBAJ_T0094010.1 MGP_CBAJ_G0034939.1 mouse_genomes_project 9 117123549 117190132 - MGP_CBAJ_P0094010 Dag1 protein_coding protein_coding MGP_CBAJ_T0094011.1 MGP_CBAJ_G0034939.1 mouse_genomes_project 9 117123560 117190235 - MGP_CBAJ_P0094011 Dag1 protein_coding protein_coding MGP_CBAJ_T0094012.1 MGP_CBAJ_G0034939.1 mouse_genomes_project 9 117123563 117190053 - MGP_CBAJ_P0094012 Dag1 protein_coding protein_coding MGP_CBAJ_T0094013.1 MGP_CBAJ_G0034939.1 mouse_genomes_project 9 117135748 117190068 - MGP_CBAJ_P0094013 Dag1 protein_coding protein_coding MGP_CBAJ_T0094014.1 MGP_CBAJ_G0034939.1 mouse_genomes_project 9 117135786 117190026 - MGP_CBAJ_P0094014 Dag1 protein_coding protein_coding MGP_CBAJ_T0094015.1 MGP_CBAJ_G0034939.1 mouse_genomes_project 9 117173276 117190068 - Dag1 protein_coding retained_intron MGP_CBAJ_T0093961.1 MGP_CBAJ_G0034932.1 mouse_genomes_project 9 116889129 116945006 + MGP_CBAJ_P0093961 Ip6k1 protein_coding protein_coding MGP_CBAJ_T0093962.1 MGP_CBAJ_G0034932.1 mouse_genomes_project 9 116889257 116941086 + MGP_CBAJ_P0093962 Ip6k1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093963.1 MGP_CBAJ_G0034932.1 mouse_genomes_project 9 116889262 116941934 + Ip6k1 protein_coding processed_transcript MGP_CBAJ_T0093964.1 MGP_CBAJ_G0034932.1 mouse_genomes_project 9 116889271 116942332 + Ip6k1 protein_coding retained_intron MGP_CBAJ_T0093965.1 MGP_CBAJ_G0034932.1 mouse_genomes_project 9 116889274 116930415 + MGP_CBAJ_P0093965 Ip6k1 protein_coding protein_coding MGP_CBAJ_T0093966.1 MGP_CBAJ_G0034932.1 mouse_genomes_project 9 116889299 116937190 + MGP_CBAJ_P0093966 Ip6k1 protein_coding protein_coding MGP_CBAJ_T0093967.1 MGP_CBAJ_G0034932.1 mouse_genomes_project 9 116915449 116941830 + MGP_CBAJ_P0093967 Ip6k1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093968.1 MGP_CBAJ_G0034932.1 mouse_genomes_project 9 116915481 116926820 + Ip6k1 protein_coding processed_transcript MGP_CBAJ_T0093969.1 MGP_CBAJ_G0034932.1 mouse_genomes_project 9 116926788 116942366 + MGP_CBAJ_P0093969 Ip6k1 protein_coding protein_coding MGP_CBAJ_T0093970.1 MGP_CBAJ_G0034932.1 mouse_genomes_project 9 116941101 116941762 + MGP_CBAJ_P0093970 Ip6k1 protein_coding protein_coding MGP_CBAJ_T0091464.1 MGP_CBAJ_G0034334.1 mouse_genomes_project 9 43622602 44083324 - MGP_CBAJ_P0091464 Grik4 protein_coding protein_coding MGP_CBAJ_T0091465.1 MGP_CBAJ_G0034334.1 mouse_genomes_project 9 43624794 43947051 - MGP_CBAJ_P0091465 Grik4 protein_coding protein_coding MGP_CBAJ_T0002377.1 MGP_CBAJ_G0002289.1 mouse_genomes_project 9 98664570 98665395 - TEC TEC MGP_CBAJ_T0002415.1 MGP_CBAJ_G0002327.1 mouse_genomes_project 9 114297043 114297668 + TEC TEC MGP_CBAJ_T0002382.1 MGP_CBAJ_G0002294.1 mouse_genomes_project 9 104889532 104891412 + TEC TEC MGP_CBAJ_T0005407.1 MGP_CBAJ_G0004564.1 mouse_genomes_project 9 89486807 89516358 + Gm2087 antisense antisense MGP_CBAJ_T0094594.1 MGP_CBAJ_G0035046.1 mouse_genomes_project 9 124977966 125037417 - MGP_CBAJ_P0094594 Cmtm8 protein_coding protein_coding MGP_CBAJ_T0092761.1 MGP_CBAJ_G0034698.1 mouse_genomes_project 9 80660965 80715332 - MGP_CBAJ_P0092761 Scg3 protein_coding protein_coding MGP_CBAJ_T0092762.1 MGP_CBAJ_G0034698.1 mouse_genomes_project 9 80661527 80715061 - MGP_CBAJ_P0092762 Scg3 protein_coding unknown_likely_coding MGP_CBAJ_T0002345.1 MGP_CBAJ_G0002258.1 mouse_genomes_project 9 77767637 77769481 + TEC TEC MGP_CBAJ_T0094372.1 MGP_CBAJ_G0034995.1 mouse_genomes_project 9 119799117 119815711 + MGP_CBAJ_P0094372 Elp6 protein_coding protein_coding MGP_CBAJ_T0094373.1 MGP_CBAJ_G0034995.1 mouse_genomes_project 9 119799148 119816491 + MGP_CBAJ_P0094373 Elp6 protein_coding protein_coding MGP_CBAJ_T0094374.1 MGP_CBAJ_G0034995.1 mouse_genomes_project 9 119799184 119813961 + MGP_CBAJ_P0094374 Elp6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094375.1 MGP_CBAJ_G0034995.1 mouse_genomes_project 9 119799440 119808914 + MGP_CBAJ_P0094375 Elp6 protein_coding protein_coding MGP_CBAJ_T0094376.1 MGP_CBAJ_G0034995.1 mouse_genomes_project 9 119803022 119807131 + Elp6 protein_coding retained_intron MGP_CBAJ_T0092266.1 MGP_CBAJ_G0034580.1 mouse_genomes_project 9 66376802 66490100 - MGP_CBAJ_P0092266 Pias1 protein_coding protein_coding MGP_CBAJ_T0091211.1 MGP_CBAJ_G0034200.1 mouse_genomes_project 9 35878296 35879881 - MGP_CBAJ_P0091211 Gm17727 protein_coding protein_coding MGP_CBAJ_T0005400.1 MGP_CBAJ_G0004561.1 mouse_genomes_project 9 85990182 85992309 - Gm27227 antisense antisense MGP_CBAJ_T0015814.1 MGP_CBAJ_G0013926.1 mouse_genomes_project 9 57856970 57858063 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011622.1 MGP_CBAJ_G0009760.1 mouse_genomes_project 9 123253941 123254238 + Gm22492 misc_RNA misc_RNA MGP_CBAJ_T0092362.1 MGP_CBAJ_G0034609.1 mouse_genomes_project 9 69197815 69223937 + MGP_CBAJ_P0092362 Ubap1l protein_coding protein_coding MGP_CBAJ_T0002411.1 MGP_CBAJ_G0002323.1 mouse_genomes_project 9 112641488 112643000 + TEC TEC MGP_CBAJ_T0018299.1 MGP_CBAJ_G0015491.1 mouse_genomes_project 9 95031585 95033199 - Snhg5 processed_transcript lincRNA MGP_CBAJ_T0018300.1 MGP_CBAJ_G0015491.1 mouse_genomes_project 9 95031587 95033160 - Snhg5 processed_transcript lincRNA MGP_CBAJ_T0018301.1 MGP_CBAJ_G0015491.1 mouse_genomes_project 9 95031592 95032235 - Snhg5 processed_transcript lincRNA MGP_CBAJ_T0099632.1 MGP_CBAJ_G0037887.1 mouse_genomes_project 9 95038429 95038545 - Gm22985 snRNA snRNA MGP_CBAJ_T0009143.1 MGP_CBAJ_G0007338.1 mouse_genomes_project 9 60362910 60372900 - Gm26631 lincRNA lincRNA MGP_CBAJ_T0094828.1 MGP_CBAJ_G0035118.1 mouse_genomes_project 9 134118651 134126603 + MGP_CBAJ_P0094828 Zfp105 protein_coding protein_coding MGP_CBAJ_T0094829.1 MGP_CBAJ_G0035118.1 mouse_genomes_project 9 134118678 134125253 + MGP_CBAJ_P0094829 Zfp105 protein_coding protein_coding MGP_CBAJ_T0090653.1 MGP_CBAJ_G0033992.1 mouse_genomes_project 9 6230539 6311129 + MGP_CBAJ_P0090653 Pgr protein_coding protein_coding MGP_CBAJ_T0090654.1 MGP_CBAJ_G0033992.1 mouse_genomes_project 9 6231125 6286475 + Pgr protein_coding retained_intron MGP_CBAJ_T0090655.1 MGP_CBAJ_G0033992.1 mouse_genomes_project 9 6231174 6307408 + MGP_CBAJ_P0090655 Pgr protein_coding protein_coding MGP_CBAJ_T0090815.1 MGP_CBAJ_G0034065.1 mouse_genomes_project 9 18596837 18601728 + MGP_CBAJ_P0090815 Olfr868 protein_coding protein_coding MGP_CBAJ_T0091556.1 MGP_CBAJ_G0034370.1 mouse_genomes_project 9 46094226 46107268 + MGP_CBAJ_P0091556 Treh protein_coding protein_coding MGP_CBAJ_T0091557.1 MGP_CBAJ_G0034370.1 mouse_genomes_project 9 46094228 46107267 + MGP_CBAJ_P0091557 Treh protein_coding nonsense_mediated_decay MGP_CBAJ_T0091558.1 MGP_CBAJ_G0034370.1 mouse_genomes_project 9 46094242 46107268 + MGP_CBAJ_P0091558 Treh protein_coding protein_coding MGP_CBAJ_T0091559.1 MGP_CBAJ_G0034370.1 mouse_genomes_project 9 46104258 46106979 + MGP_CBAJ_P0091559 Treh protein_coding nonsense_mediated_decay MGP_CBAJ_T0093297.1 MGP_CBAJ_G0034819.1 mouse_genomes_project 9 107032642 107053843 + MGP_CBAJ_P0093297 Cep70 protein_coding protein_coding MGP_CBAJ_T0093298.1 MGP_CBAJ_G0034819.1 mouse_genomes_project 9 107032717 107083968 + MGP_CBAJ_P0093298 Cep70 protein_coding protein_coding MGP_CBAJ_T0093299.1 MGP_CBAJ_G0034819.1 mouse_genomes_project 9 107032728 107044541 + Cep70 protein_coding retained_intron MGP_CBAJ_T0093300.1 MGP_CBAJ_G0034819.1 mouse_genomes_project 9 107032736 107055009 + MGP_CBAJ_P0093300 Cep70 protein_coding protein_coding MGP_CBAJ_T0093301.1 MGP_CBAJ_G0034819.1 mouse_genomes_project 9 107032738 107081549 + MGP_CBAJ_P0093301 Cep70 protein_coding protein_coding MGP_CBAJ_T0093302.1 MGP_CBAJ_G0034819.1 mouse_genomes_project 9 107032757 107052702 + MGP_CBAJ_P0093302 Cep70 protein_coding protein_coding MGP_CBAJ_T0093303.1 MGP_CBAJ_G0034819.1 mouse_genomes_project 9 107032801 107061712 + MGP_CBAJ_P0093303 Cep70 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093304.1 MGP_CBAJ_G0034819.1 mouse_genomes_project 9 107035560 107053147 + Cep70 protein_coding retained_intron MGP_CBAJ_T0093305.1 MGP_CBAJ_G0034819.1 mouse_genomes_project 9 107075063 107079915 + Cep70 protein_coding retained_intron MGP_CBAJ_T0092502.1 MGP_CBAJ_G0034645.1 mouse_genomes_project 9 73747784 73787700 + MGP_CBAJ_P0092502 Ice2 protein_coding protein_coding MGP_CBAJ_T0092503.1 MGP_CBAJ_G0034645.1 mouse_genomes_project 9 73747801 73786648 + Ice2 protein_coding retained_intron MGP_CBAJ_T0092504.1 MGP_CBAJ_G0034645.1 mouse_genomes_project 9 73747805 73761909 + MGP_CBAJ_P0092504 Ice2 protein_coding protein_coding MGP_CBAJ_T0092505.1 MGP_CBAJ_G0034645.1 mouse_genomes_project 9 73747811 73762283 + MGP_CBAJ_P0092505 Ice2 protein_coding protein_coding MGP_CBAJ_T0092506.1 MGP_CBAJ_G0034645.1 mouse_genomes_project 9 73747813 73761921 + MGP_CBAJ_P0092506 Ice2 protein_coding protein_coding MGP_CBAJ_T0092507.1 MGP_CBAJ_G0034645.1 mouse_genomes_project 9 73747815 73762540 + MGP_CBAJ_P0092507 Ice2 protein_coding protein_coding MGP_CBAJ_T0092508.1 MGP_CBAJ_G0034645.1 mouse_genomes_project 9 73747835 73764764 + MGP_CBAJ_P0092508 Ice2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092509.1 MGP_CBAJ_G0034645.1 mouse_genomes_project 9 73748526 73761768 + Ice2 protein_coding retained_intron MGP_CBAJ_T0092510.1 MGP_CBAJ_G0034645.1 mouse_genomes_project 9 73771300 73780283 + Ice2 protein_coding processed_transcript MGP_CBAJ_T0092511.1 MGP_CBAJ_G0034645.1 mouse_genomes_project 9 73771458 73781602 + Ice2 protein_coding retained_intron MGP_CBAJ_T0005445.1 MGP_CBAJ_G0004590.1 mouse_genomes_project 9 115401896 115404534 + Gm28111 antisense antisense MGP_CBAJ_T0090733.1 MGP_CBAJ_G0034016.1 mouse_genomes_project 9 12990579 13055362 - MGP_CBAJ_P0090733 Hephl1 protein_coding protein_coding MGP_CBAJ_T0093676.1 MGP_CBAJ_G0034890.1 mouse_genomes_project 9 115313649 115316301 - MGP_CBAJ_P0093676 Iqcf4 protein_coding protein_coding MGP_CBAJ_T0009102.1 MGP_CBAJ_G0007302.1 mouse_genomes_project 9 10967237 10967640 - Gm29176 lincRNA lincRNA MGP_CBAJ_T0091597.1 MGP_CBAJ_G0034376.1 mouse_genomes_project 9 46241177 46321690 - MGP_CBAJ_P0091597 Kmt2a protein_coding unknown_likely_coding MGP_CBAJ_T0091598.1 MGP_CBAJ_G0034376.1 mouse_genomes_project 9 46241178 46321690 - MGP_CBAJ_P0091598 Kmt2a protein_coding protein_coding MGP_CBAJ_T0091599.1 MGP_CBAJ_G0034376.1 mouse_genomes_project 9 46241178 46321712 - MGP_CBAJ_P0091599 Kmt2a protein_coding protein_coding MGP_CBAJ_T0091600.1 MGP_CBAJ_G0034376.1 mouse_genomes_project 9 46253963 46259399 - MGP_CBAJ_P0091600 Kmt2a protein_coding nonsense_mediated_decay MGP_CBAJ_T0091601.1 MGP_CBAJ_G0034376.1 mouse_genomes_project 9 46262018 46288601 - MGP_CBAJ_P0091601 Kmt2a protein_coding nonsense_mediated_decay MGP_CBAJ_T0091602.1 MGP_CBAJ_G0034376.1 mouse_genomes_project 9 46281980 46321712 - MGP_CBAJ_P0091602 Kmt2a protein_coding protein_coding MGP_CBAJ_T0005474.1 MGP_CBAJ_G0004614.1 mouse_genomes_project 9 129623188 129665259 - Gm2415 antisense antisense MGP_CBAJ_T0005475.1 MGP_CBAJ_G0004614.1 mouse_genomes_project 9 129623271 129665269 - Gm2415 antisense antisense MGP_CBAJ_T0005476.1 MGP_CBAJ_G0004614.1 mouse_genomes_project 9 129638147 129665258 - Gm2415 antisense antisense MGP_CBAJ_T0005477.1 MGP_CBAJ_G0004614.1 mouse_genomes_project 9 129659911 129665455 - Gm2415 antisense antisense MGP_CBAJ_T0093389.1 MGP_CBAJ_G0034838.1 mouse_genomes_project 9 110708672 110749634 + MGP_CBAJ_P0093389 Ky protein_coding protein_coding MGP_CBAJ_T0093390.1 MGP_CBAJ_G0034838.1 mouse_genomes_project 9 110724743 110731467 + Ky protein_coding retained_intron MGP_CBAJ_T0090980.1 MGP_CBAJ_G0034123.1 mouse_genomes_project 9 20772309 20775226 + MGP_CBAJ_P0090980 Swsap1 protein_coding protein_coding MGP_CBAJ_T0094225.1 MGP_CBAJ_G0034971.1 mouse_genomes_project 9 117983687 118029514 + MGP_CBAJ_P0094225 Pfkfb4 protein_coding protein_coding MGP_CBAJ_T0094226.1 MGP_CBAJ_G0034971.1 mouse_genomes_project 9 117983811 118029514 + MGP_CBAJ_P0094226 Pfkfb4 protein_coding protein_coding MGP_CBAJ_T0094227.1 MGP_CBAJ_G0034971.1 mouse_genomes_project 9 117983857 117991204 + Pfkfb4 protein_coding retained_intron MGP_CBAJ_T0094228.1 MGP_CBAJ_G0034971.1 mouse_genomes_project 9 117983901 117984811 + Pfkfb4 protein_coding retained_intron MGP_CBAJ_T0094229.1 MGP_CBAJ_G0034971.1 mouse_genomes_project 9 117983925 118027998 + Pfkfb4 protein_coding retained_intron MGP_CBAJ_T0094230.1 MGP_CBAJ_G0034971.1 mouse_genomes_project 9 117983925 118027998 + MGP_CBAJ_P0094230 Pfkfb4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094231.1 MGP_CBAJ_G0034971.1 mouse_genomes_project 9 117983925 118027998 + MGP_CBAJ_P0094231 Pfkfb4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094232.1 MGP_CBAJ_G0034971.1 mouse_genomes_project 9 117990822 118005456 + Pfkfb4 protein_coding processed_transcript MGP_CBAJ_T0094233.1 MGP_CBAJ_G0034971.1 mouse_genomes_project 9 118005998 118026148 + MGP_CBAJ_P0094233 Pfkfb4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094234.1 MGP_CBAJ_G0034971.1 mouse_genomes_project 9 118013793 118029483 + Pfkfb4 protein_coding processed_transcript MGP_CBAJ_T0090813.1 MGP_CBAJ_G0034063.1 mouse_genomes_project 9 18493979 18495056 - MGP_CBAJ_P0090813 Olfr866 protein_coding protein_coding MGP_CBAJ_T0005468.1 MGP_CBAJ_G0004608.1 mouse_genomes_project 9 120579944 120581188 + 1700061E17Rik antisense antisense MGP_CBAJ_T0094865.1 MGP_CBAJ_G0035133.1 mouse_genomes_project 9 134981856 135106666 + MGP_CBAJ_P0094865 Ccr9 protein_coding protein_coding MGP_CBAJ_T0094873.1 MGP_CBAJ_G0035133.1 mouse_genomes_project 9 135088243 135106664 + MGP_CBAJ_P0094873 Ccr9 protein_coding protein_coding MGP_CBAJ_T0094874.1 MGP_CBAJ_G0035133.1 mouse_genomes_project 9 135088259 135106227 + MGP_CBAJ_P0094874 Ccr9 protein_coding protein_coding MGP_CBAJ_T0094875.1 MGP_CBAJ_G0035133.1 mouse_genomes_project 9 135088261 135106672 + MGP_CBAJ_P0094875 Ccr9 protein_coding protein_coding MGP_CBAJ_T0094876.1 MGP_CBAJ_G0035133.1 mouse_genomes_project 9 135099115 135108158 + MGP_CBAJ_P0094876 Ccr9 protein_coding protein_coding MGP_CBAJ_T0093224.1 MGP_CBAJ_G0034798.1 mouse_genomes_project 9 104191228 104268132 - MGP_CBAJ_P0093224 Zbtb38 protein_coding protein_coding MGP_CBAJ_T0093225.1 MGP_CBAJ_G0034798.1 mouse_genomes_project 9 104193866 104247103 - MGP_CBAJ_P0093225 Zbtb38 protein_coding protein_coding MGP_CBAJ_T0093226.1 MGP_CBAJ_G0034798.1 mouse_genomes_project 9 104194698 104233130 - MGP_CBAJ_P0093226 Zbtb38 protein_coding non_stop_decay MGP_CBAJ_T0093227.1 MGP_CBAJ_G0034798.1 mouse_genomes_project 9 104195838 104233580 - MGP_CBAJ_P0093227 Zbtb38 protein_coding protein_coding MGP_CBAJ_T0093228.1 MGP_CBAJ_G0034798.1 mouse_genomes_project 9 104196917 104232845 - MGP_CBAJ_P0093228 Zbtb38 protein_coding protein_coding MGP_CBAJ_T0093229.1 MGP_CBAJ_G0034798.1 mouse_genomes_project 9 104231489 104244465 - Zbtb38 protein_coding processed_transcript MGP_CBAJ_T0093230.1 MGP_CBAJ_G0034798.1 mouse_genomes_project 9 104245279 104267986 - Zbtb38 protein_coding retained_intron MGP_CBAJ_T0093231.1 MGP_CBAJ_G0034798.1 mouse_genomes_project 9 104245279 104246771 - Zbtb38 protein_coding processed_transcript MGP_CBAJ_T0093232.1 MGP_CBAJ_G0034798.1 mouse_genomes_project 9 104246888 104248198 - Zbtb38 protein_coding processed_transcript MGP_CBAJ_T0093233.1 MGP_CBAJ_G0034798.1 mouse_genomes_project 9 104246985 104248097 - Zbtb38 protein_coding retained_intron MGP_CBAJ_T0093234.1 MGP_CBAJ_G0034798.1 mouse_genomes_project 9 104262579 104268028 - Zbtb38 protein_coding retained_intron MGP_CBAJ_T0093235.1 MGP_CBAJ_G0034798.1 mouse_genomes_project 9 104262781 104267994 - Zbtb38 protein_coding processed_transcript MGP_CBAJ_T0015867.1 MGP_CBAJ_G0013979.1 mouse_genomes_project 9 94227665 94228167 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009103.1 MGP_CBAJ_G0007303.1 mouse_genomes_project 9 12759852 12762155 + Gm16302 lincRNA lincRNA MGP_CBAJ_T0005458.1 MGP_CBAJ_G0004598.1 mouse_genomes_project 9 116612496 116613273 + Gm37850 antisense antisense MGP_CBAJ_T0092718.1 MGP_CBAJ_G0034687.1 mouse_genomes_project 9 79883021 79970230 + MGP_CBAJ_P0092718 Fam214a protein_coding protein_coding MGP_CBAJ_T0092719.1 MGP_CBAJ_G0034687.1 mouse_genomes_project 9 79908302 79970230 + MGP_CBAJ_P0092719 Fam214a protein_coding protein_coding MGP_CBAJ_T0092658.1 MGP_CBAJ_G0034672.1 mouse_genomes_project 9 77358793 77458668 + MGP_CBAJ_P0092658 Nedd4 protein_coding protein_coding MGP_CBAJ_T0092659.1 MGP_CBAJ_G0034672.1 mouse_genomes_project 9 77358885 77371649 + Nedd4 protein_coding retained_intron MGP_CBAJ_T0092660.1 MGP_CBAJ_G0034672.1 mouse_genomes_project 9 77358929 77428299 + MGP_CBAJ_P0092660 Nedd4 protein_coding protein_coding MGP_CBAJ_T0092661.1 MGP_CBAJ_G0034672.1 mouse_genomes_project 9 77358934 77418426 + MGP_CBAJ_P0092661 Nedd4 protein_coding protein_coding MGP_CBAJ_T0092662.1 MGP_CBAJ_G0034672.1 mouse_genomes_project 9 77358937 77359748 + Nedd4 protein_coding processed_transcript MGP_CBAJ_T0092663.1 MGP_CBAJ_G0034672.1 mouse_genomes_project 9 77366284 77371630 + Nedd4 protein_coding retained_intron MGP_CBAJ_T0092664.1 MGP_CBAJ_G0034672.1 mouse_genomes_project 9 77366295 77427864 + MGP_CBAJ_P0092664 Nedd4 protein_coding protein_coding MGP_CBAJ_T0092665.1 MGP_CBAJ_G0034672.1 mouse_genomes_project 9 77448337 77456975 + MGP_CBAJ_P0092665 Nedd4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092666.1 MGP_CBAJ_G0034672.1 mouse_genomes_project 9 77450311 77455970 + Nedd4 protein_coding retained_intron MGP_CBAJ_T0092667.1 MGP_CBAJ_G0034672.1 mouse_genomes_project 9 77454664 77456080 + Nedd4 protein_coding retained_intron MGP_CBAJ_T0091739.1 MGP_CBAJ_G0034422.1 mouse_genomes_project 9 50891588 50962722 + MGP_CBAJ_P0091739 Usp28 protein_coding protein_coding MGP_CBAJ_T0091740.1 MGP_CBAJ_G0034422.1 mouse_genomes_project 9 50891647 50961754 + MGP_CBAJ_P0091740 Usp28 protein_coding unknown_likely_coding MGP_CBAJ_T0094468.1 MGP_CBAJ_G0035015.1 mouse_genomes_project 9 120506317 120508457 - MGP_CBAJ_P0094468 Gm590 protein_coding protein_coding MGP_CBAJ_T0015819.1 MGP_CBAJ_G0013931.1 mouse_genomes_project 9 62909214 62909701 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0092460.1 MGP_CBAJ_G0034636.1 mouse_genomes_project 9 70887782 70972380 - MGP_CBAJ_P0092460 Rab8b protein_coding protein_coding MGP_CBAJ_T0090871.1 MGP_CBAJ_G0034082.1 mouse_genomes_project 9 19477872 19483541 + MGP_CBAJ_P0090871 A230050P20Rik protein_coding protein_coding MGP_CBAJ_T0090872.1 MGP_CBAJ_G0034082.1 mouse_genomes_project 9 19477888 19483541 + A230050P20Rik protein_coding retained_intron MGP_CBAJ_T0090873.1 MGP_CBAJ_G0034082.1 mouse_genomes_project 9 19477910 19479333 + A230050P20Rik protein_coding processed_transcript MGP_CBAJ_T0090874.1 MGP_CBAJ_G0034082.1 mouse_genomes_project 9 19478514 19483009 + A230050P20Rik protein_coding retained_intron MGP_CBAJ_T0090875.1 MGP_CBAJ_G0034082.1 mouse_genomes_project 9 19480009 19482359 + A230050P20Rik protein_coding retained_intron MGP_CBAJ_T0092459.1 MGP_CBAJ_G0034635.1 mouse_genomes_project 9 70852604 70878857 - MGP_CBAJ_P0092459 Aph1c protein_coding protein_coding MGP_CBAJ_T0005428.1 MGP_CBAJ_G0004576.1 mouse_genomes_project 9 104950197 104970614 + Gm15891 antisense antisense MGP_CBAJ_T0100858.1 MGP_CBAJ_G0039113.1 mouse_genomes_project 9 19498245 19498325 + Gm23008 snoRNA snoRNA MGP_CBAJ_T0094789.1 MGP_CBAJ_G0035102.1 mouse_genomes_project 9 132846576 132855056 - MGP_CBAJ_P0094789 Hhatl protein_coding protein_coding MGP_CBAJ_T0094790.1 MGP_CBAJ_G0035102.1 mouse_genomes_project 9 132846582 132853585 - MGP_CBAJ_P0094790 Hhatl protein_coding protein_coding MGP_CBAJ_T0015839.1 MGP_CBAJ_G0013951.1 mouse_genomes_project 9 79607582 79607889 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002332.1 MGP_CBAJ_G0002245.1 mouse_genomes_project 9 76956244 76958244 + TEC TEC MGP_CBAJ_T0092290.1 MGP_CBAJ_G0034588.1 mouse_genomes_project 9 67744794 67774011 + MGP_CBAJ_P0092290 Lctl protein_coding protein_coding MGP_CBAJ_T0092291.1 MGP_CBAJ_G0034588.1 mouse_genomes_project 9 67744819 67745783 + Lctl protein_coding retained_intron MGP_CBAJ_T0092292.1 MGP_CBAJ_G0034588.1 mouse_genomes_project 9 67744876 67745659 + Lctl protein_coding processed_transcript MGP_CBAJ_T0092293.1 MGP_CBAJ_G0034588.1 mouse_genomes_project 9 67744906 67774007 + MGP_CBAJ_P0092293 Lctl protein_coding nonsense_mediated_decay MGP_CBAJ_T0092294.1 MGP_CBAJ_G0034588.1 mouse_genomes_project 9 67749261 67773998 + MGP_CBAJ_P0092294 Lctl protein_coding protein_coding MGP_CBAJ_T0092295.1 MGP_CBAJ_G0034588.1 mouse_genomes_project 9 67749683 67757691 + Lctl protein_coding retained_intron MGP_CBAJ_T0091036.1 MGP_CBAJ_G0034147.1 mouse_genomes_project 9 23589405 23749832 - MGP_CBAJ_P0091036 Dpy19l2 protein_coding protein_coding MGP_CBAJ_T0005438.1 MGP_CBAJ_G0004585.1 mouse_genomes_project 9 114002842 114012488 + Gm19667 antisense antisense MGP_CBAJ_T0015931.1 MGP_CBAJ_G0014043.1 mouse_genomes_project 9 132217194 132217544 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0092455.1 MGP_CBAJ_G0034633.1 mouse_genomes_project 9 70809851 70831586 - MGP_CBAJ_P0092455 Aph1b protein_coding protein_coding MGP_CBAJ_T0092456.1 MGP_CBAJ_G0034633.1 mouse_genomes_project 9 70809858 70831532 - MGP_CBAJ_P0092456 Aph1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0092457.1 MGP_CBAJ_G0034633.1 mouse_genomes_project 9 70813842 70831472 - MGP_CBAJ_P0092457 Aph1b protein_coding protein_coding MGP_CBAJ_T0002413.1 MGP_CBAJ_G0002325.1 mouse_genomes_project 9 113569787 113573031 + TEC TEC MGP_CBAJ_T0091695.1 MGP_CBAJ_G0034406.1 mouse_genomes_project 9 47871238 47874525 + MGP_CBAJ_P0091695 Apoa5 protein_coding protein_coding MGP_CBAJ_T0091696.1 MGP_CBAJ_G0034406.1 mouse_genomes_project 9 47871683 47874525 + MGP_CBAJ_P0091696 Apoa5 protein_coding protein_coding MGP_CBAJ_T0002328.1 MGP_CBAJ_G0002241.1 mouse_genomes_project 9 76592730 76595023 - TEC TEC MGP_CBAJ_T0010907.1 MGP_CBAJ_G0009045.1 mouse_genomes_project 9 1144878 1144945 - Gm23992 miRNA miRNA MGP_CBAJ_T0094285.1 MGP_CBAJ_G0034984.1 mouse_genomes_project 9 118757841 118804933 - MGP_CBAJ_P0094285 Fbxw15 protein_coding protein_coding MGP_CBAJ_T0094286.1 MGP_CBAJ_G0034984.1 mouse_genomes_project 9 118757848 118804921 - MGP_CBAJ_P0094286 Fbxw15 protein_coding protein_coding MGP_CBAJ_T0094287.1 MGP_CBAJ_G0034984.1 mouse_genomes_project 9 118789928 118804919 - MGP_CBAJ_P0094287 Fbxw15 protein_coding protein_coding MGP_CBAJ_T0015859.1 MGP_CBAJ_G0013971.1 mouse_genomes_project 9 89541820 89542208 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0090925.1 MGP_CBAJ_G0034106.1 mouse_genomes_project 9 20106566 20134673 + MGP_CBAJ_P0090925 Qtrt1 protein_coding protein_coding MGP_CBAJ_T0101393.1 MGP_CBAJ_G0035053.1 mouse_genomes_project 9 128460220 128603785 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101394.1 MGP_CBAJ_G0035053.1 mouse_genomes_project 9 128499056 128603947 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101395.1 MGP_CBAJ_G0035053.1 mouse_genomes_project 9 128555882 128603947 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101396.1 MGP_CBAJ_G0035053.1 mouse_genomes_project 9 128602607 128635536 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0015928.1 MGP_CBAJ_G0014040.1 mouse_genomes_project 9 127904585 127908414 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0090893.1 MGP_CBAJ_G0034095.1 mouse_genomes_project 9 19729054 19759536 - MGP_CBAJ_P0090893 Tyk2 protein_coding unknown_likely_coding MGP_CBAJ_T0090894.1 MGP_CBAJ_G0034095.1 mouse_genomes_project 9 19729059 19758223 - MGP_CBAJ_P0090894 Tyk2 protein_coding protein_coding MGP_CBAJ_T0099633.1 MGP_CBAJ_G0037888.1 mouse_genomes_project 9 97090675 97090852 + Gm22866 snRNA snRNA MGP_CBAJ_T0002333.1 MGP_CBAJ_G0002246.1 mouse_genomes_project 9 77008332 77009891 + TEC TEC MGP_CBAJ_T0009123.1 MGP_CBAJ_G0007322.1 mouse_genomes_project 9 36442604 36474040 - lincRNA lincRNA MGP_CBAJ_T0009124.1 MGP_CBAJ_G0007322.1 mouse_genomes_project 9 36448568 36473678 - lincRNA lincRNA MGP_CBAJ_T0100861.1 MGP_CBAJ_G0039116.1 mouse_genomes_project 9 24722702 24722811 - Gm25861 snoRNA snoRNA MGP_CBAJ_T0091328.1 MGP_CBAJ_G0034253.1 mouse_genomes_project 9 38990579 38991515 + MGP_CBAJ_P0091328 Olfr901 protein_coding protein_coding MGP_CBAJ_T0093148.1 MGP_CBAJ_G0034783.1 mouse_genomes_project 9 101754355 101776737 - MGP_CBAJ_P0093148 1190002N15Rik protein_coding protein_coding MGP_CBAJ_T0094163.1 MGP_CBAJ_G0034962.1 mouse_genomes_project 9 117706004 117756055 + MGP_CBAJ_P0094163 Prkar2a protein_coding protein_coding MGP_CBAJ_T0094164.1 MGP_CBAJ_G0034962.1 mouse_genomes_project 9 117708821 117779590 + MGP_CBAJ_P0094164 Prkar2a protein_coding protein_coding MGP_CBAJ_T0094165.1 MGP_CBAJ_G0034962.1 mouse_genomes_project 9 117709135 117776144 + MGP_CBAJ_P0094165 Prkar2a protein_coding protein_coding MGP_CBAJ_T0094166.1 MGP_CBAJ_G0034962.1 mouse_genomes_project 9 117742214 117773415 + MGP_CBAJ_P0094166 Prkar2a protein_coding protein_coding MGP_CBAJ_T0094167.1 MGP_CBAJ_G0034962.1 mouse_genomes_project 9 117767396 117768713 + Prkar2a protein_coding retained_intron MGP_CBAJ_T0094168.1 MGP_CBAJ_G0034962.1 mouse_genomes_project 9 117777398 117778654 + Prkar2a protein_coding processed_transcript MGP_CBAJ_T0094830.1 MGP_CBAJ_G0035119.1 mouse_genomes_project 9 134142082 134149933 - MGP_CBAJ_P0094830 1110059G10Rik protein_coding protein_coding MGP_CBAJ_T0094831.1 MGP_CBAJ_G0035119.1 mouse_genomes_project 9 134144528 134149886 - MGP_CBAJ_P0094831 1110059G10Rik protein_coding protein_coding MGP_CBAJ_T0093609.1 MGP_CBAJ_G0034878.1 mouse_genomes_project 9 114947991 115039943 + MGP_CBAJ_P0093609 Poc1a protein_coding protein_coding MGP_CBAJ_T0093610.1 MGP_CBAJ_G0034878.1 mouse_genomes_project 9 114948310 115039956 + MGP_CBAJ_P0093610 Poc1a protein_coding protein_coding MGP_CBAJ_T0093611.1 MGP_CBAJ_G0034878.1 mouse_genomes_project 9 114974048 115040585 + Poc1a protein_coding processed_transcript MGP_CBAJ_T0093612.1 MGP_CBAJ_G0034878.1 mouse_genomes_project 9 114983947 115039941 + Poc1a protein_coding processed_transcript MGP_CBAJ_T0093613.1 MGP_CBAJ_G0034878.1 mouse_genomes_project 9 115014931 115039942 + Poc1a protein_coding processed_transcript MGP_CBAJ_T0005443.1 MGP_CBAJ_G0004588.1 mouse_genomes_project 9 114997213 115022921 - Gm29123 antisense antisense MGP_CBAJ_T0005451.1 MGP_CBAJ_G0004594.1 mouse_genomes_project 9 116281842 116282924 - Gm17118 antisense antisense MGP_CBAJ_T0010953.1 MGP_CBAJ_G0009091.1 mouse_genomes_project 9 74871899 74871959 - Mir5626 miRNA miRNA MGP_CBAJ_T0011617.1 MGP_CBAJ_G0009755.1 mouse_genomes_project 9 106402246 106402353 - Gm27919 misc_RNA misc_RNA MGP_CBAJ_T0091308.1 MGP_CBAJ_G0034234.1 mouse_genomes_project 9 38390708 38391773 + MGP_CBAJ_P0091308 Olfr878 protein_coding protein_coding MGP_CBAJ_T0090802.1 MGP_CBAJ_G0034052.1 mouse_genomes_project 9 17923679 17924618 + MGP_CBAJ_P0090802 Olfr851 protein_coding protein_coding MGP_CBAJ_T0093625.1 MGP_CBAJ_G0034881.1 mouse_genomes_project 9 115160765 115168379 - MGP_CBAJ_P0093625 Abhd14a protein_coding protein_coding MGP_CBAJ_T0093626.1 MGP_CBAJ_G0034881.1 mouse_genomes_project 9 115160768 115168379 - MGP_CBAJ_P0093626 Abhd14a protein_coding protein_coding MGP_CBAJ_T0093627.1 MGP_CBAJ_G0034881.1 mouse_genomes_project 9 115160772 115168264 - MGP_CBAJ_P0093627 Abhd14a protein_coding protein_coding MGP_CBAJ_T0093628.1 MGP_CBAJ_G0034881.1 mouse_genomes_project 9 115160824 115168144 - MGP_CBAJ_P0093628 Abhd14a protein_coding protein_coding MGP_CBAJ_T0093629.1 MGP_CBAJ_G0034881.1 mouse_genomes_project 9 115161096 115165556 - MGP_CBAJ_P0093629 Abhd14a protein_coding protein_coding MGP_CBAJ_T0093630.1 MGP_CBAJ_G0034881.1 mouse_genomes_project 9 115161133 115168321 - MGP_CBAJ_P0093630 Abhd14a protein_coding protein_coding MGP_CBAJ_T0093631.1 MGP_CBAJ_G0034881.1 mouse_genomes_project 9 115161494 115168218 - MGP_CBAJ_P0093631 Abhd14a protein_coding protein_coding MGP_CBAJ_T0093632.1 MGP_CBAJ_G0034881.1 mouse_genomes_project 9 115164093 115164850 - Abhd14a protein_coding retained_intron MGP_CBAJ_T0010938.1 MGP_CBAJ_G0009076.1 mouse_genomes_project 9 53239775 53239859 - Mir34b miRNA miRNA MGP_CBAJ_T0092078.1 MGP_CBAJ_G0034536.1 mouse_genomes_project 9 60908309 60927614 + MGP_CBAJ_P0092078 Cyp11a1 protein_coding protein_coding MGP_CBAJ_T0092079.1 MGP_CBAJ_G0034536.1 mouse_genomes_project 9 60918656 60936432 + MGP_CBAJ_P0092079 Cyp11a1 protein_coding protein_coding MGP_CBAJ_T0092080.1 MGP_CBAJ_G0034536.1 mouse_genomes_project 9 60918982 60929258 + Cyp11a1 protein_coding retained_intron MGP_CBAJ_T0092081.1 MGP_CBAJ_G0034536.1 mouse_genomes_project 9 60924267 60934652 + MGP_CBAJ_P0092081 Cyp11a1 protein_coding protein_coding MGP_CBAJ_T0090651.1 MGP_CBAJ_G0033990.1 mouse_genomes_project 9 5485358 5507405 + MGP_CBAJ_P0090651 1700128F08Rik protein_coding protein_coding MGP_CBAJ_T0094819.1 MGP_CBAJ_G0035113.1 mouse_genomes_project 9 133925267 133985707 + MGP_CBAJ_P0094819 Topaz1 protein_coding protein_coding MGP_CBAJ_T0092282.1 MGP_CBAJ_G0034586.1 mouse_genomes_project 9 67222450 67343720 - MGP_CBAJ_P0092282 Smad3 protein_coding protein_coding MGP_CBAJ_T0092283.1 MGP_CBAJ_G0034586.1 mouse_genomes_project 9 67230454 67242240 - MGP_CBAJ_P0092283 Smad3 protein_coding protein_coding MGP_CBAJ_T0092284.1 MGP_CBAJ_G0034586.1 mouse_genomes_project 9 67230482 67292720 - MGP_CBAJ_P0092284 Smad3 protein_coding protein_coding MGP_CBAJ_T0092285.1 MGP_CBAJ_G0034586.1 mouse_genomes_project 9 67241840 67336819 - MGP_CBAJ_P0092285 Smad3 protein_coding protein_coding MGP_CBAJ_T0092286.1 MGP_CBAJ_G0034586.1 mouse_genomes_project 9 67243505 67326016 - Smad3 protein_coding processed_transcript MGP_CBAJ_T0094703.1 MGP_CBAJ_G0035078.1 mouse_genomes_project 9 130814936 130845070 + MGP_CBAJ_P0094703 Ttc21a protein_coding protein_coding MGP_CBAJ_T0094704.1 MGP_CBAJ_G0035078.1 mouse_genomes_project 9 130814965 130844330 + Ttc21a protein_coding retained_intron MGP_CBAJ_T0094705.1 MGP_CBAJ_G0035078.1 mouse_genomes_project 9 130814966 130839940 + Ttc21a protein_coding retained_intron MGP_CBAJ_T0094706.1 MGP_CBAJ_G0035078.1 mouse_genomes_project 9 130838881 130843446 + Ttc21a protein_coding retained_intron MGP_CBAJ_T0094901.1 MGP_CBAJ_G0035145.1 mouse_genomes_project 9 135897723 135897981 - MGP_CBAJ_P0094901 protein_coding protein_coding MGP_CBAJ_T0094562.1 MGP_CBAJ_G0035029.1 mouse_genomes_project 9 123555357 123615009 - MGP_CBAJ_P0094562 Pdcd6ip protein_coding protein_coding MGP_CBAJ_T0094563.1 MGP_CBAJ_G0035029.1 mouse_genomes_project 9 123558085 123614994 - MGP_CBAJ_P0094563 Pdcd6ip protein_coding protein_coding MGP_CBAJ_T0094564.1 MGP_CBAJ_G0035029.1 mouse_genomes_project 9 123559209 123560934 - Pdcd6ip protein_coding retained_intron MGP_CBAJ_T0094565.1 MGP_CBAJ_G0035029.1 mouse_genomes_project 9 123563278 123566058 - Pdcd6ip protein_coding retained_intron MGP_CBAJ_T0094566.1 MGP_CBAJ_G0035029.1 mouse_genomes_project 9 123581148 123592145 - Pdcd6ip protein_coding processed_transcript MGP_CBAJ_T0094567.1 MGP_CBAJ_G0035029.1 mouse_genomes_project 9 123594242 123604268 - Pdcd6ip protein_coding retained_intron MGP_CBAJ_T0099605.1 MGP_CBAJ_G0037860.1 mouse_genomes_project 9 51843193 51843300 - Gm25633 snRNA snRNA MGP_CBAJ_T0090605.1 MGP_CBAJ_G0033973.1 mouse_genomes_project 9 4298426 4319951 + MGP_CBAJ_P0090605 Dcun1d5 protein_coding protein_coding MGP_CBAJ_T0011608.1 MGP_CBAJ_G0009746.1 mouse_genomes_project 9 43625155 43625214 - Gm24420 misc_RNA misc_RNA MGP_CBAJ_T0091124.1 MGP_CBAJ_G0034176.1 mouse_genomes_project 9 31564767 31635708 - MGP_CBAJ_P0091124 Barx2 protein_coding protein_coding MGP_CBAJ_T0005436.1 MGP_CBAJ_G0004583.1 mouse_genomes_project 9 113721509 113724232 + Gm20643 antisense antisense MGP_CBAJ_T0015876.1 MGP_CBAJ_G0013988.1 mouse_genomes_project 9 97505768 97506365 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100873.1 MGP_CBAJ_G0039128.1 mouse_genomes_project 9 46160379 46160514 - Gm24166 snoRNA snoRNA MGP_CBAJ_T0002390.1 MGP_CBAJ_G0002302.1 mouse_genomes_project 9 108685517 108693427 + TEC TEC MGP_CBAJ_T0099608.1 MGP_CBAJ_G0037863.1 mouse_genomes_project 9 58143523 58143614 - Gm23407 snRNA snRNA MGP_CBAJ_T0090639.1 MGP_CBAJ_G0033987.1 mouse_genomes_project 9 5146298 5240687 - MGP_CBAJ_P0090639 Yap1 protein_coding protein_coding MGP_CBAJ_T0090640.1 MGP_CBAJ_G0033987.1 mouse_genomes_project 9 5146298 5240695 - MGP_CBAJ_P0090640 Yap1 protein_coding protein_coding MGP_CBAJ_T0090641.1 MGP_CBAJ_G0033987.1 mouse_genomes_project 9 5148796 5237802 - MGP_CBAJ_P0090641 Yap1 protein_coding protein_coding MGP_CBAJ_T0090642.1 MGP_CBAJ_G0033987.1 mouse_genomes_project 9 5148796 5240489 - MGP_CBAJ_P0090642 Yap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090643.1 MGP_CBAJ_G0033987.1 mouse_genomes_project 9 5148796 5240489 - MGP_CBAJ_P0090643 Yap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090644.1 MGP_CBAJ_G0033987.1 mouse_genomes_project 9 5148796 5240489 - MGP_CBAJ_P0090644 Yap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090645.1 MGP_CBAJ_G0033987.1 mouse_genomes_project 9 5186285 5189799 - Yap1 protein_coding processed_transcript MGP_CBAJ_T0090646.1 MGP_CBAJ_G0033987.1 mouse_genomes_project 9 5197773 5239856 - Yap1 protein_coding processed_transcript MGP_CBAJ_T0090647.1 MGP_CBAJ_G0033987.1 mouse_genomes_project 9 5197815 5239874 - Yap1 protein_coding processed_transcript MGP_CBAJ_T0090648.1 MGP_CBAJ_G0033987.1 mouse_genomes_project 9 5229707 5240695 - Yap1 protein_coding retained_intron MGP_CBAJ_T0010915.1 MGP_CBAJ_G0009053.1 mouse_genomes_project 9 13288818 13288885 + miRNA miRNA MGP_CBAJ_T0098126.1 MGP_CBAJ_G0036399.1 mouse_genomes_project 9 121301405 121301523 - n-R5s90 rRNA rRNA MGP_CBAJ_T0091072.1 MGP_CBAJ_G0034162.1 mouse_genomes_project 9 26602344 26639341 + MGP_CBAJ_P0091072 Igsf9b protein_coding protein_coding MGP_CBAJ_T0091073.1 MGP_CBAJ_G0034162.1 mouse_genomes_project 9 26602346 26643973 + MGP_CBAJ_P0091073 Igsf9b protein_coding protein_coding MGP_CBAJ_T0091074.1 MGP_CBAJ_G0034162.1 mouse_genomes_project 9 26602570 26655187 + MGP_CBAJ_P0091074 Igsf9b protein_coding unknown_likely_coding MGP_CBAJ_T0092652.1 MGP_CBAJ_G0034671.1 mouse_genomes_project 9 77207400 77296789 + Rfx7 protein_coding processed_transcript MGP_CBAJ_T0092653.1 MGP_CBAJ_G0034671.1 mouse_genomes_project 9 77207751 77311654 + MGP_CBAJ_P0092653 Rfx7 protein_coding protein_coding MGP_CBAJ_T0092654.1 MGP_CBAJ_G0034671.1 mouse_genomes_project 9 77207766 77304186 + MGP_CBAJ_P0092654 Rfx7 protein_coding protein_coding MGP_CBAJ_T0092655.1 MGP_CBAJ_G0034671.1 mouse_genomes_project 9 77207898 77304249 + MGP_CBAJ_P0092655 Rfx7 protein_coding protein_coding MGP_CBAJ_T0092656.1 MGP_CBAJ_G0034671.1 mouse_genomes_project 9 77291358 77294140 + Rfx7 protein_coding retained_intron MGP_CBAJ_T0092657.1 MGP_CBAJ_G0034671.1 mouse_genomes_project 9 77302158 77304237 + Rfx7 protein_coding retained_intron MGP_CBAJ_T0002319.1 MGP_CBAJ_G0002232.1 mouse_genomes_project 9 35437816 35438969 - TEC TEC MGP_CBAJ_T0092146.1 MGP_CBAJ_G0034549.1 mouse_genomes_project 9 61837035 61876466 + MGP_CBAJ_P0092146 Hcn4 protein_coding protein_coding MGP_CBAJ_T0094141.1 MGP_CBAJ_G0034959.1 mouse_genomes_project 9 117567096 117586653 - MGP_CBAJ_P0094141 P4htm protein_coding protein_coding MGP_CBAJ_T0094142.1 MGP_CBAJ_G0034959.1 mouse_genomes_project 9 117567413 117567792 - P4htm protein_coding processed_transcript MGP_CBAJ_T0094143.1 MGP_CBAJ_G0034959.1 mouse_genomes_project 9 117568823 117571163 - P4htm protein_coding retained_intron MGP_CBAJ_T0094144.1 MGP_CBAJ_G0034959.1 mouse_genomes_project 9 117569778 117586562 - P4htm protein_coding retained_intron MGP_CBAJ_T0094145.1 MGP_CBAJ_G0034959.1 mouse_genomes_project 9 117571217 117586566 - MGP_CBAJ_P0094145 P4htm protein_coding protein_coding MGP_CBAJ_T0094146.1 MGP_CBAJ_G0034959.1 mouse_genomes_project 9 117571217 117586332 - MGP_CBAJ_P0094146 P4htm protein_coding protein_coding MGP_CBAJ_T0094282.1 MGP_CBAJ_G0034981.1 mouse_genomes_project 9 118301812 118728829 - MGP_CBAJ_P0094282 protein_coding protein_coding MGP_CBAJ_T0093727.1 MGP_CBAJ_G0034900.1 mouse_genomes_project 9 116125815 116131773 + MGP_CBAJ_P0093727 Cish protein_coding protein_coding MGP_CBAJ_T0093728.1 MGP_CBAJ_G0034900.1 mouse_genomes_project 9 116126499 116132570 + MGP_CBAJ_P0093728 Cish protein_coding protein_coding MGP_CBAJ_T0093729.1 MGP_CBAJ_G0034900.1 mouse_genomes_project 9 116126696 116131729 + Cish protein_coding processed_transcript MGP_CBAJ_T0093730.1 MGP_CBAJ_G0034900.1 mouse_genomes_project 9 116126701 116130337 + MGP_CBAJ_P0093730 Cish protein_coding protein_coding MGP_CBAJ_T0093731.1 MGP_CBAJ_G0034900.1 mouse_genomes_project 9 116128940 116130244 + Cish protein_coding processed_transcript MGP_CBAJ_T0099640.1 MGP_CBAJ_G0037895.1 mouse_genomes_project 9 114226455 114226542 - Gm22720 snRNA snRNA MGP_CBAJ_T0090606.1 MGP_CBAJ_G0033974.1 mouse_genomes_project 9 4390593 4401413 + MGP_CBAJ_P0090606 Mmp13 protein_coding protein_coding MGP_CBAJ_T0092287.1 MGP_CBAJ_G0034587.1 mouse_genomes_project 9 67558799 67634534 - MGP_CBAJ_P0092287 Smad6 protein_coding protein_coding MGP_CBAJ_T0092288.1 MGP_CBAJ_G0034587.1 mouse_genomes_project 9 67559733 67629462 - Smad6 protein_coding processed_transcript MGP_CBAJ_T0092289.1 MGP_CBAJ_G0034587.1 mouse_genomes_project 9 67634235 67634507 - MGP_CBAJ_P0092289 Smad6 protein_coding protein_coding MGP_CBAJ_T0015796.1 MGP_CBAJ_G0013908.1 mouse_genomes_project 9 24235517 24235595 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0094308.1 MGP_CBAJ_G0034989.1 mouse_genomes_project 9 119255294 119257324 - MGP_CBAJ_P0094308 Camp protein_coding protein_coding MGP_CBAJ_T0091857.1 MGP_CBAJ_G0034457.1 mouse_genomes_project 9 54149383 54169591 - MGP_CBAJ_P0091857 Fdx1 protein_coding protein_coding MGP_CBAJ_T0015838.1 MGP_CBAJ_G0013950.1 mouse_genomes_project 9 79475308 79475498 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0092210.1 MGP_CBAJ_G0034565.1 mouse_genomes_project 9 63939702 63958395 + MGP_CBAJ_P0092210 Larp6 protein_coding protein_coding MGP_CBAJ_T0091581.1 MGP_CBAJ_G0034373.1 mouse_genomes_project 9 46200644 46220061 + Ift46 protein_coding processed_transcript MGP_CBAJ_T0091582.1 MGP_CBAJ_G0034373.1 mouse_genomes_project 9 46208526 46230531 + MGP_CBAJ_P0091582 Ift46 protein_coding protein_coding MGP_CBAJ_T0091583.1 MGP_CBAJ_G0034373.1 mouse_genomes_project 9 46208551 46219965 + MGP_CBAJ_P0091583 Ift46 protein_coding protein_coding MGP_CBAJ_T0091584.1 MGP_CBAJ_G0034373.1 mouse_genomes_project 9 46208642 46224141 + Ift46 protein_coding processed_transcript MGP_CBAJ_T0091585.1 MGP_CBAJ_G0034373.1 mouse_genomes_project 9 46208645 46210007 + Ift46 protein_coding processed_transcript MGP_CBAJ_T0091586.1 MGP_CBAJ_G0034373.1 mouse_genomes_project 9 46208691 46221878 + MGP_CBAJ_P0091586 Ift46 protein_coding protein_coding MGP_CBAJ_T0091587.1 MGP_CBAJ_G0034373.1 mouse_genomes_project 9 46208854 46219957 + MGP_CBAJ_P0091587 Ift46 protein_coding protein_coding MGP_CBAJ_T0091588.1 MGP_CBAJ_G0034373.1 mouse_genomes_project 9 46209291 46220026 + MGP_CBAJ_P0091588 Ift46 protein_coding protein_coding MGP_CBAJ_T0091589.1 MGP_CBAJ_G0034373.1 mouse_genomes_project 9 46211994 46228712 + MGP_CBAJ_P0091589 Ift46 protein_coding protein_coding MGP_CBAJ_T0091590.1 MGP_CBAJ_G0034373.1 mouse_genomes_project 9 46213375 46220035 + Ift46 protein_coding retained_intron MGP_CBAJ_T0091591.1 MGP_CBAJ_G0034373.1 mouse_genomes_project 9 46222131 46225381 + Ift46 protein_coding processed_transcript MGP_CBAJ_T0091592.1 MGP_CBAJ_G0034373.1 mouse_genomes_project 9 46227260 46228553 + Ift46 protein_coding retained_intron MGP_CBAJ_T0090976.1 MGP_CBAJ_G0034121.1 mouse_genomes_project 9 20740343 20748748 + MGP_CBAJ_P0090976 Ccdc159 protein_coding protein_coding MGP_CBAJ_T0090977.1 MGP_CBAJ_G0034121.1 mouse_genomes_project 9 20740343 20748748 + MGP_CBAJ_P0090977 Ccdc159 protein_coding protein_coding MGP_CBAJ_T0005396.1 MGP_CBAJ_G0004557.1 mouse_genomes_project 9 81437481 81438751 + Gm27234 antisense antisense MGP_CBAJ_T0094316.1 MGP_CBAJ_G0034991.1 mouse_genomes_project 9 119372642 119540561 + MGP_CBAJ_P0094316 Map4 protein_coding protein_coding MGP_CBAJ_T0094317.1 MGP_CBAJ_G0034991.1 mouse_genomes_project 9 119372982 119454118 + MGP_CBAJ_P0094317 Map4 protein_coding protein_coding MGP_CBAJ_T0094318.1 MGP_CBAJ_G0034991.1 mouse_genomes_project 9 119373046 119540553 + MGP_CBAJ_P0094318 Map4 protein_coding protein_coding MGP_CBAJ_T0094319.1 MGP_CBAJ_G0034991.1 mouse_genomes_project 9 119416930 119451667 + Map4 protein_coding processed_transcript MGP_CBAJ_T0094320.1 MGP_CBAJ_G0034991.1 mouse_genomes_project 9 119488525 119529440 + MGP_CBAJ_P0094320 Map4 protein_coding protein_coding MGP_CBAJ_T0094321.1 MGP_CBAJ_G0034991.1 mouse_genomes_project 9 119504056 119540552 + MGP_CBAJ_P0094321 Map4 protein_coding protein_coding MGP_CBAJ_T0094322.1 MGP_CBAJ_G0034991.1 mouse_genomes_project 9 119504060 119539777 + MGP_CBAJ_P0094322 Map4 protein_coding protein_coding MGP_CBAJ_T0094323.1 MGP_CBAJ_G0034991.1 mouse_genomes_project 9 119519243 119539774 + MGP_CBAJ_P0094323 Map4 protein_coding protein_coding MGP_CBAJ_T0094324.1 MGP_CBAJ_G0034991.1 mouse_genomes_project 9 119519251 119525487 + Map4 protein_coding processed_transcript MGP_CBAJ_T0094325.1 MGP_CBAJ_G0034991.1 mouse_genomes_project 9 119524247 119539101 + MGP_CBAJ_P0094325 Map4 protein_coding protein_coding MGP_CBAJ_T0094326.1 MGP_CBAJ_G0034991.1 mouse_genomes_project 9 119524247 119538691 + MGP_CBAJ_P0094326 Map4 protein_coding protein_coding MGP_CBAJ_T0094327.1 MGP_CBAJ_G0034991.1 mouse_genomes_project 9 119525558 119538399 + MGP_CBAJ_P0094327 Map4 protein_coding protein_coding MGP_CBAJ_T0094328.1 MGP_CBAJ_G0034991.1 mouse_genomes_project 9 119525582 119538518 + MGP_CBAJ_P0094328 Map4 protein_coding protein_coding MGP_CBAJ_T0094329.1 MGP_CBAJ_G0034991.1 mouse_genomes_project 9 119534118 119536639 + Map4 protein_coding retained_intron MGP_CBAJ_T0094330.1 MGP_CBAJ_G0034991.1 mouse_genomes_project 9 119534576 119538754 + MGP_CBAJ_P0094330 Map4 protein_coding protein_coding MGP_CBAJ_T0094331.1 MGP_CBAJ_G0034991.1 mouse_genomes_project 9 119536403 119539101 + MGP_CBAJ_P0094331 Map4 protein_coding protein_coding MGP_CBAJ_T0092395.1 MGP_CBAJ_G0034622.1 mouse_genomes_project 9 69820969 69824470 + protein_coding retained_intron MGP_CBAJ_T0092396.1 MGP_CBAJ_G0034622.1 mouse_genomes_project 9 69821011 69823798 + protein_coding retained_intron MGP_CBAJ_T0099609.1 MGP_CBAJ_G0037864.1 mouse_genomes_project 9 66546631 66546789 + Gm24526 snRNA snRNA MGP_CBAJ_T0005409.1 MGP_CBAJ_G0004566.1 mouse_genomes_project 9 101943124 101949737 - Gm16262 antisense antisense MGP_CBAJ_T0090865.1 MGP_CBAJ_G0034078.1 mouse_genomes_project 9 19231932 19246393 + MGP_CBAJ_P0090865 Pin1 protein_coding protein_coding MGP_CBAJ_T0091385.1 MGP_CBAJ_G0034298.1 mouse_genomes_project 9 40359029 40361104 + MGP_CBAJ_P0091385 Olfr961 protein_coding protein_coding MGP_CBAJ_T0002344.1 MGP_CBAJ_G0002257.1 mouse_genomes_project 9 77719006 77720280 - TEC TEC MGP_CBAJ_T0092169.1 MGP_CBAJ_G0034559.1 mouse_genomes_project 9 62818403 62854860 + MGP_CBAJ_P0092169 Gramd2 protein_coding protein_coding MGP_CBAJ_T0092170.1 MGP_CBAJ_G0034559.1 mouse_genomes_project 9 62848410 62859454 + MGP_CBAJ_P0092170 Gramd2 protein_coding protein_coding MGP_CBAJ_T0092171.1 MGP_CBAJ_G0034559.1 mouse_genomes_project 9 62848537 62857361 + MGP_CBAJ_P0092171 Gramd2 protein_coding protein_coding MGP_CBAJ_T0092172.1 MGP_CBAJ_G0034559.1 mouse_genomes_project 9 62851095 62854778 + Gramd2 protein_coding retained_intron MGP_CBAJ_T0092173.1 MGP_CBAJ_G0034559.1 mouse_genomes_project 9 62852119 62857251 + MGP_CBAJ_P0092173 Gramd2 protein_coding protein_coding MGP_CBAJ_T0092174.1 MGP_CBAJ_G0034559.1 mouse_genomes_project 9 62855052 62859454 + Gramd2 protein_coding retained_intron MGP_CBAJ_T0092112.1 MGP_CBAJ_G0034541.1 mouse_genomes_project 9 61167829 61209170 - MGP_CBAJ_P0092112 Pml protein_coding protein_coding MGP_CBAJ_T0092113.1 MGP_CBAJ_G0034541.1 mouse_genomes_project 9 61167829 61209074 - MGP_CBAJ_P0092113 Pml protein_coding protein_coding MGP_CBAJ_T0092114.1 MGP_CBAJ_G0034541.1 mouse_genomes_project 9 61168295 61183170 - Pml protein_coding retained_intron MGP_CBAJ_T0092115.1 MGP_CBAJ_G0034541.1 mouse_genomes_project 9 61169504 61209044 - MGP_CBAJ_P0092115 Pml protein_coding protein_coding MGP_CBAJ_T0092116.1 MGP_CBAJ_G0034541.1 mouse_genomes_project 9 61170016 61179912 - Pml protein_coding processed_transcript MGP_CBAJ_T0092117.1 MGP_CBAJ_G0034541.1 mouse_genomes_project 9 61170829 61209170 - MGP_CBAJ_P0092117 Pml protein_coding protein_coding MGP_CBAJ_T0092118.1 MGP_CBAJ_G0034541.1 mouse_genomes_project 9 61179632 61209170 - MGP_CBAJ_P0092118 Pml protein_coding nonsense_mediated_decay MGP_CBAJ_T0092119.1 MGP_CBAJ_G0034541.1 mouse_genomes_project 9 61180175 61183180 - Pml protein_coding retained_intron MGP_CBAJ_T0092120.1 MGP_CBAJ_G0034541.1 mouse_genomes_project 9 61203366 61209007 - MGP_CBAJ_P0092120 Pml protein_coding nonsense_mediated_decay MGP_CBAJ_T0092121.1 MGP_CBAJ_G0034541.1 mouse_genomes_project 9 61203411 61209170 - MGP_CBAJ_P0092121 Pml protein_coding protein_coding MGP_CBAJ_T0010975.1 MGP_CBAJ_G0009113.1 mouse_genomes_project 9 120175630 120175747 - Mir8107 miRNA miRNA MGP_CBAJ_T0091869.1 MGP_CBAJ_G0034464.1 mouse_genomes_project 9 55732828 55762738 + MGP_CBAJ_P0091869 4930550C14Rik protein_coding protein_coding MGP_CBAJ_T0010956.1 MGP_CBAJ_G0009094.1 mouse_genomes_project 9 82876056 82876130 + Gm25250 miRNA miRNA MGP_CBAJ_T0099631.1 MGP_CBAJ_G0037886.1 mouse_genomes_project 9 93073411 93073525 - Gm25949 snRNA snRNA MGP_CBAJ_T0010937.1 MGP_CBAJ_G0009075.1 mouse_genomes_project 9 53236049 53236126 - Mir34c miRNA miRNA MGP_CBAJ_T0092843.1 MGP_CBAJ_G0034721.1 mouse_genomes_project 9 83865087 83867715 - MGP_CBAJ_P0092843 Ooep protein_coding protein_coding MGP_CBAJ_T0098475.1 MGP_CBAJ_G0036735.1 mouse_genomes_project 9 110340742 110343220 - Gm29388 sense_intronic sense_intronic MGP_CBAJ_T0091641.1 MGP_CBAJ_G0034393.1 mouse_genomes_project 9 46909498 46916646 + MGP_CBAJ_P0091641 Fxyd2 protein_coding protein_coding MGP_CBAJ_T0091642.1 MGP_CBAJ_G0034393.1 mouse_genomes_project 9 46912513 46916095 + MGP_CBAJ_P0091642 Fxyd2 protein_coding unknown_likely_coding MGP_CBAJ_T0090793.1 MGP_CBAJ_G0034043.1 mouse_genomes_project 9 17394452 17395388 + MGP_CBAJ_P0090793 Olfr835 protein_coding protein_coding MGP_CBAJ_T0094445.1 MGP_CBAJ_G0035007.1 mouse_genomes_project 9 120364899 120370499 + MGP_CBAJ_P0094445 Prss42 protein_coding protein_coding MGP_CBAJ_T0002348.1 MGP_CBAJ_G0002261.1 mouse_genomes_project 9 78670198 78673232 - TEC TEC MGP_CBAJ_T0092613.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 76908028 77016146 + MGP_CBAJ_P0092613 Zfp280d protein_coding protein_coding MGP_CBAJ_T0092614.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 76908047 77017033 + MGP_CBAJ_P0092614 Zfp280d protein_coding protein_coding MGP_CBAJ_T0092615.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 76908047 76986528 + MGP_CBAJ_P0092615 Zfp280d protein_coding protein_coding MGP_CBAJ_T0092616.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 76908074 77015666 + MGP_CBAJ_P0092616 Zfp280d protein_coding nonsense_mediated_decay MGP_CBAJ_T0092617.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 76908075 77016753 + MGP_CBAJ_P0092617 Zfp280d protein_coding nonsense_mediated_decay MGP_CBAJ_T0092618.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 76908083 76927605 + Zfp280d protein_coding processed_transcript MGP_CBAJ_T0092619.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 76908147 76926297 + Zfp280d protein_coding processed_transcript MGP_CBAJ_T0092620.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 76908149 76939334 + Zfp280d protein_coding retained_intron MGP_CBAJ_T0092621.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 76908172 77017017 + MGP_CBAJ_P0092621 Zfp280d protein_coding protein_coding MGP_CBAJ_T0092622.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 76935463 77016772 + MGP_CBAJ_P0092622 Zfp280d protein_coding nonsense_mediated_decay MGP_CBAJ_T0092623.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 76938885 76964161 + MGP_CBAJ_P0092623 Zfp280d protein_coding nonsense_mediated_decay MGP_CBAJ_T0092624.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 76947213 76949311 + Zfp280d protein_coding retained_intron MGP_CBAJ_T0092625.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 76953256 76965220 + MGP_CBAJ_P0092625 Zfp280d protein_coding nonsense_mediated_decay MGP_CBAJ_T0092626.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 76953778 76960863 + Zfp280d protein_coding retained_intron MGP_CBAJ_T0092627.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 76964167 76973116 + Zfp280d protein_coding retained_intron MGP_CBAJ_T0092628.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 76972054 76974144 + Zfp280d protein_coding retained_intron MGP_CBAJ_T0092629.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 76976508 76980019 + Zfp280d protein_coding retained_intron MGP_CBAJ_T0092630.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 76976554 77015202 + MGP_CBAJ_P0092630 Zfp280d protein_coding protein_coding MGP_CBAJ_T0092631.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 76984183 77015923 + MGP_CBAJ_P0092631 Zfp280d protein_coding protein_coding MGP_CBAJ_T0092632.1 MGP_CBAJ_G0034668.1 mouse_genomes_project 9 77013432 77016883 + MGP_CBAJ_P0092632 Zfp280d protein_coding protein_coding MGP_CBAJ_T0002368.1 MGP_CBAJ_G0002280.1 mouse_genomes_project 9 95909577 95910565 + TEC TEC MGP_CBAJ_T0015896.1 MGP_CBAJ_G0014008.1 mouse_genomes_project 9 104795317 104797154 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009160.1 MGP_CBAJ_G0007350.1 mouse_genomes_project 9 74608752 74643597 - Gm26849 lincRNA lincRNA MGP_CBAJ_T0015807.1 MGP_CBAJ_G0013919.1 mouse_genomes_project 9 38102969 38103963 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010946.1 MGP_CBAJ_G0009084.1 mouse_genomes_project 9 67873179 67873306 + Gm24106 miRNA miRNA MGP_CBAJ_T0005337.1 MGP_CBAJ_G0004517.1 mouse_genomes_project 9 21056233 21072321 - 1810064F22Rik antisense antisense MGP_CBAJ_T0005338.1 MGP_CBAJ_G0004517.1 mouse_genomes_project 9 21065262 21072342 - 1810064F22Rik antisense antisense MGP_CBAJ_T0005339.1 MGP_CBAJ_G0004517.1 mouse_genomes_project 9 21065822 21067028 - 1810064F22Rik antisense antisense MGP_CBAJ_T0091272.1 MGP_CBAJ_G0034217.1 mouse_genomes_project 9 37641114 37712590 - MGP_CBAJ_P0091272 Ccdc15 protein_coding protein_coding MGP_CBAJ_T0091273.1 MGP_CBAJ_G0034217.1 mouse_genomes_project 9 37648391 37712291 - MGP_CBAJ_P0091273 Ccdc15 protein_coding unknown_likely_coding MGP_CBAJ_T0090619.1 MGP_CBAJ_G0033981.1 mouse_genomes_project 9 4705651 4721773 + MGP_CBAJ_P0090619 Mmp27 protein_coding protein_coding MGP_CBAJ_T0090620.1 MGP_CBAJ_G0033981.1 mouse_genomes_project 9 4705713 4721768 + MGP_CBAJ_P0090620 Mmp27 protein_coding protein_coding MGP_CBAJ_T0090621.1 MGP_CBAJ_G0033981.1 mouse_genomes_project 9 4705718 4722243 + MGP_CBAJ_P0090621 Mmp27 protein_coding protein_coding MGP_CBAJ_T0091469.1 MGP_CBAJ_G0034337.1 mouse_genomes_project 9 44282809 44377372 - MGP_CBAJ_P0091469 Pou2f3 protein_coding protein_coding MGP_CBAJ_T0091470.1 MGP_CBAJ_G0034337.1 mouse_genomes_project 9 44283409 44372876 - MGP_CBAJ_P0091470 Pou2f3 protein_coding protein_coding MGP_CBAJ_T0094838.1 MGP_CBAJ_G0035123.1 mouse_genomes_project 9 134283449 134334255 - MGP_CBAJ_P0094838 Zdhhc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094839.1 MGP_CBAJ_G0035123.1 mouse_genomes_project 9 134291609 134334313 - MGP_CBAJ_P0094839 Zdhhc3 protein_coding protein_coding MGP_CBAJ_T0094840.1 MGP_CBAJ_G0035123.1 mouse_genomes_project 9 134294295 134334288 - MGP_CBAJ_P0094840 Zdhhc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094841.1 MGP_CBAJ_G0035123.1 mouse_genomes_project 9 134294963 134334274 - MGP_CBAJ_P0094841 Zdhhc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094842.1 MGP_CBAJ_G0035123.1 mouse_genomes_project 9 134295503 134334286 - MGP_CBAJ_P0094842 Zdhhc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094843.1 MGP_CBAJ_G0035123.1 mouse_genomes_project 9 134295763 134321471 - MGP_CBAJ_P0094843 Zdhhc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094844.1 MGP_CBAJ_G0035123.1 mouse_genomes_project 9 134297821 134334229 - MGP_CBAJ_P0094844 Zdhhc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094845.1 MGP_CBAJ_G0035123.1 mouse_genomes_project 9 134300311 134334312 - Zdhhc3 protein_coding retained_intron MGP_CBAJ_T0094846.1 MGP_CBAJ_G0035123.1 mouse_genomes_project 9 134301759 134334232 - MGP_CBAJ_P0094846 Zdhhc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094847.1 MGP_CBAJ_G0035123.1 mouse_genomes_project 9 134306496 134334286 - MGP_CBAJ_P0094847 Zdhhc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094848.1 MGP_CBAJ_G0035123.1 mouse_genomes_project 9 134321441 134333940 - MGP_CBAJ_P0094848 Zdhhc3 protein_coding protein_coding MGP_CBAJ_T0091317.1 MGP_CBAJ_G0034242.1 mouse_genomes_project 9 38643489 38644434 + MGP_CBAJ_P0091317 Olfr890 protein_coding protein_coding MGP_CBAJ_T0092493.1 MGP_CBAJ_G0034642.1 mouse_genomes_project 9 71988894 71990693 - MGP_CBAJ_P0092493 C2cd4a protein_coding protein_coding MGP_CBAJ_T0091452.1 MGP_CBAJ_G0034331.1 mouse_genomes_project 9 43337644 43352778 - MGP_CBAJ_P0091452 Sc5d protein_coding protein_coding MGP_CBAJ_T0091453.1 MGP_CBAJ_G0034331.1 mouse_genomes_project 9 43338206 43352678 - MGP_CBAJ_P0091453 Sc5d protein_coding protein_coding MGP_CBAJ_T0098120.1 MGP_CBAJ_G0036393.1 mouse_genomes_project 9 93589696 93589830 + Gm24649 rRNA rRNA MGP_CBAJ_T0091045.1 MGP_CBAJ_G0034153.1 mouse_genomes_project 9 25987059 26014686 + MGP_CBAJ_P0091045 B3gat1 protein_coding protein_coding MGP_CBAJ_T0091046.1 MGP_CBAJ_G0034153.1 mouse_genomes_project 9 25987134 26009415 + MGP_CBAJ_P0091046 B3gat1 protein_coding protein_coding MGP_CBAJ_T0091047.1 MGP_CBAJ_G0034153.1 mouse_genomes_project 9 25987155 26017971 + MGP_CBAJ_P0091047 B3gat1 protein_coding protein_coding MGP_CBAJ_T0091048.1 MGP_CBAJ_G0034153.1 mouse_genomes_project 9 25987182 26011318 + MGP_CBAJ_P0091048 B3gat1 protein_coding protein_coding MGP_CBAJ_T0091049.1 MGP_CBAJ_G0034153.1 mouse_genomes_project 9 26004897 26014674 + MGP_CBAJ_P0091049 B3gat1 protein_coding protein_coding MGP_CBAJ_T0091050.1 MGP_CBAJ_G0034153.1 mouse_genomes_project 9 26008619 26017977 + MGP_CBAJ_P0091050 B3gat1 protein_coding protein_coding MGP_CBAJ_T0005469.1 MGP_CBAJ_G0004609.1 mouse_genomes_project 9 121241104 121241718 + Gm43236 antisense antisense MGP_CBAJ_T0005439.1 MGP_CBAJ_G0004586.1 mouse_genomes_project 9 114781884 114792834 + D030055H07Rik antisense antisense MGP_CBAJ_T0005440.1 MGP_CBAJ_G0004586.1 mouse_genomes_project 9 114788075 114792880 + D030055H07Rik antisense antisense MGP_CBAJ_T0005441.1 MGP_CBAJ_G0004586.1 mouse_genomes_project 9 114789463 114793330 + D030055H07Rik antisense antisense MGP_CBAJ_T0009229.1 MGP_CBAJ_G0007406.1 mouse_genomes_project 9 117983123 117983480 - Gm38004 lincRNA lincRNA MGP_CBAJ_T0015865.1 MGP_CBAJ_G0013977.1 mouse_genomes_project 9 92701393 92701937 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009209.1 MGP_CBAJ_G0007389.1 mouse_genomes_project 9 107162518 107169074 + lincRNA lincRNA MGP_CBAJ_T0010968.1 MGP_CBAJ_G0009106.1 mouse_genomes_project 9 117556544 117556664 - Gm24083 miRNA miRNA MGP_CBAJ_T0009162.1 MGP_CBAJ_G0007352.1 mouse_genomes_project 9 77069890 77070501 + Gm27255 lincRNA lincRNA MGP_CBAJ_T0090710.1 MGP_CBAJ_G0034009.1 mouse_genomes_project 9 12652491 12656155 - MGP_CBAJ_P0090710 Fut4 protein_coding protein_coding MGP_CBAJ_T0092267.1 MGP_CBAJ_G0034581.1 mouse_genomes_project 9 66671338 66682135 - MGP_CBAJ_P0092267 Skor1 protein_coding protein_coding MGP_CBAJ_T0092268.1 MGP_CBAJ_G0034581.1 mouse_genomes_project 9 66671338 66680185 - MGP_CBAJ_P0092268 Skor1 protein_coding protein_coding MGP_CBAJ_T0092269.1 MGP_CBAJ_G0034581.1 mouse_genomes_project 9 66671344 66680154 - MGP_CBAJ_P0092269 Skor1 protein_coding protein_coding MGP_CBAJ_T0091596.1 MGP_CBAJ_G0034375.1 mouse_genomes_project 9 46237223 46240775 - MGP_CBAJ_P0091596 Ttc36 protein_coding protein_coding MGP_CBAJ_T0090854.1 MGP_CBAJ_G0034077.1 mouse_genomes_project 9 19220136 19226573 + Ubl5 protein_coding retained_intron MGP_CBAJ_T0090855.1 MGP_CBAJ_G0034077.1 mouse_genomes_project 9 19220576 19226762 + MGP_CBAJ_P0090855 Ubl5 protein_coding protein_coding MGP_CBAJ_T0090856.1 MGP_CBAJ_G0034077.1 mouse_genomes_project 9 19221329 19226575 + MGP_CBAJ_P0090856 Ubl5 protein_coding protein_coding MGP_CBAJ_T0090857.1 MGP_CBAJ_G0034077.1 mouse_genomes_project 9 19221598 19222912 + MGP_CBAJ_P0090857 Ubl5 protein_coding protein_coding MGP_CBAJ_T0090858.1 MGP_CBAJ_G0034077.1 mouse_genomes_project 9 19222083 19226573 + MGP_CBAJ_P0090858 Ubl5 protein_coding protein_coding MGP_CBAJ_T0090859.1 MGP_CBAJ_G0034077.1 mouse_genomes_project 9 19222096 19225704 + Ubl5 protein_coding retained_intron MGP_CBAJ_T0090860.1 MGP_CBAJ_G0034077.1 mouse_genomes_project 9 19222096 19226938 + MGP_CBAJ_P0090860 Ubl5 protein_coding protein_coding MGP_CBAJ_T0090861.1 MGP_CBAJ_G0034077.1 mouse_genomes_project 9 19222097 19226573 + MGP_CBAJ_P0090861 Ubl5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090862.1 MGP_CBAJ_G0034077.1 mouse_genomes_project 9 19222130 19226567 + MGP_CBAJ_P0090862 Ubl5 protein_coding protein_coding MGP_CBAJ_T0090863.1 MGP_CBAJ_G0034077.1 mouse_genomes_project 9 19222303 19226573 + MGP_CBAJ_P0090863 Ubl5 protein_coding protein_coding MGP_CBAJ_T0090864.1 MGP_CBAJ_G0034077.1 mouse_genomes_project 9 19222480 19226574 + MGP_CBAJ_P0090864 Ubl5 protein_coding protein_coding MGP_CBAJ_T0005397.1 MGP_CBAJ_G0004558.1 mouse_genomes_project 9 83884063 83885264 - 4930542C12Rik antisense antisense MGP_CBAJ_T0009131.1 MGP_CBAJ_G0007329.1 mouse_genomes_project 9 45862568 45864378 + C030014I23Rik lincRNA lincRNA MGP_CBAJ_T0009132.1 MGP_CBAJ_G0007329.1 mouse_genomes_project 9 45863422 45866825 + C030014I23Rik lincRNA lincRNA MGP_CBAJ_T0092046.1 MGP_CBAJ_G0034520.1 mouse_genomes_project 9 60335659 60337005 + MGP_CBAJ_P0092046 Rpp25 protein_coding protein_coding MGP_CBAJ_T0099589.1 MGP_CBAJ_G0037844.1 mouse_genomes_project 9 17016452 17016554 + Gm24546 snRNA snRNA MGP_CBAJ_T0091203.1 MGP_CBAJ_G0034195.1 mouse_genomes_project 9 35698348 35702454 - MGP_CBAJ_P0091203 Pate4 protein_coding protein_coding MGP_CBAJ_T0093338.1 MGP_CBAJ_G0034827.1 mouse_genomes_project 9 107746527 107748600 - MGP_CBAJ_P0093338 Sox14 protein_coding protein_coding MGP_CBAJ_T0093339.1 MGP_CBAJ_G0034827.1 mouse_genomes_project 9 107746641 107748086 - MGP_CBAJ_P0093339 Sox14 protein_coding protein_coding MGP_CBAJ_T0093282.1 MGP_CBAJ_G0034811.1 mouse_genomes_project 9 106569143 106570959 + MGP_CBAJ_P0093282 protein_coding protein_coding MGP_CBAJ_T0091218.1 MGP_CBAJ_G0034207.1 mouse_genomes_project 9 36841437 36842802 - MGP_CBAJ_P0091218 Gm17689 protein_coding protein_coding MGP_CBAJ_T0092760.1 MGP_CBAJ_G0034697.1 mouse_genomes_project 9 80643407 80655476 + MGP_CBAJ_P0092760 Lysmd2 protein_coding protein_coding MGP_CBAJ_T0093431.1 MGP_CBAJ_G0034846.1 mouse_genomes_project 9 111471988 111491188 - MGP_CBAJ_P0093431 Srprb protein_coding protein_coding MGP_CBAJ_T0093432.1 MGP_CBAJ_G0034846.1 mouse_genomes_project 9 111473046 111491180 - Srprb protein_coding retained_intron MGP_CBAJ_T0093434.1 MGP_CBAJ_G0034846.1 mouse_genomes_project 9 111474210 111476121 - Srprb protein_coding processed_transcript MGP_CBAJ_T0094659.1 MGP_CBAJ_G0035062.1 mouse_genomes_project 9 129869210 129892066 + Dlec1 protein_coding retained_intron MGP_CBAJ_T0094660.1 MGP_CBAJ_G0035062.1 mouse_genomes_project 9 129869210 129918442 + MGP_CBAJ_P0094660 Dlec1 protein_coding protein_coding MGP_CBAJ_T0094661.1 MGP_CBAJ_G0035062.1 mouse_genomes_project 9 129869210 129917854 + MGP_CBAJ_P0094661 Dlec1 protein_coding protein_coding MGP_CBAJ_T0094662.1 MGP_CBAJ_G0035062.1 mouse_genomes_project 9 129869241 129901500 + MGP_CBAJ_P0094662 Dlec1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094663.1 MGP_CBAJ_G0035062.1 mouse_genomes_project 9 129886386 129911088 + Dlec1 protein_coding retained_intron MGP_CBAJ_T0094664.1 MGP_CBAJ_G0035062.1 mouse_genomes_project 9 129893786 129895041 + Dlec1 protein_coding retained_intron MGP_CBAJ_T0094665.1 MGP_CBAJ_G0035062.1 mouse_genomes_project 9 129895177 129901498 + Dlec1 protein_coding retained_intron MGP_CBAJ_T0094666.1 MGP_CBAJ_G0035062.1 mouse_genomes_project 9 129895328 129897048 + Dlec1 protein_coding retained_intron MGP_CBAJ_T0094669.1 MGP_CBAJ_G0035065.1 mouse_genomes_project 9 129943124 129966506 - MGP_CBAJ_P0094669 Slc22a14 protein_coding protein_coding MGP_CBAJ_T0094670.1 MGP_CBAJ_G0035065.1 mouse_genomes_project 9 129943125 130174093 - MGP_CBAJ_P0094670 Slc22a14 protein_coding protein_coding MGP_CBAJ_T0094671.1 MGP_CBAJ_G0035065.1 mouse_genomes_project 9 129943337 129947302 - MGP_CBAJ_P0094671 Slc22a14 protein_coding protein_coding MGP_CBAJ_T0094672.1 MGP_CBAJ_G0035065.1 mouse_genomes_project 9 129954615 129966461 - MGP_CBAJ_P0094672 Slc22a14 protein_coding protein_coding MGP_CBAJ_T0002359.1 MGP_CBAJ_G0002272.1 mouse_genomes_project 9 92922037 92922509 - TEC TEC MGP_CBAJ_T0002360.1 MGP_CBAJ_G0002272.1 mouse_genomes_project 9 92922037 92922151 - TEC TEC MGP_CBAJ_T0010950.1 MGP_CBAJ_G0009088.1 mouse_genomes_project 9 71878649 71878713 - Mir7241 miRNA miRNA MGP_CBAJ_T0100854.1 MGP_CBAJ_G0039109.1 mouse_genomes_project 9 13304219 13304289 - Scarna9 snoRNA snoRNA MGP_CBAJ_T0092903.1 MGP_CBAJ_G0034735.1 mouse_genomes_project 9 87445497 87455909 - MGP_CBAJ_P0092903 Htr1b protein_coding protein_coding MGP_CBAJ_T0092904.1 MGP_CBAJ_G0034735.1 mouse_genomes_project 9 87453411 87454684 - MGP_CBAJ_P0092904 Htr1b protein_coding protein_coding MGP_CBAJ_T0093021.1 MGP_CBAJ_G0034755.1 mouse_genomes_project 9 93386098 93390475 + MGP_CBAJ_P0093021 Ripply2 protein_coding protein_coding MGP_CBAJ_T0093022.1 MGP_CBAJ_G0034755.1 mouse_genomes_project 9 93386197 93390474 + MGP_CBAJ_P0093022 Ripply2 protein_coding protein_coding MGP_CBAJ_T0005453.1 MGP_CBAJ_G0004596.1 mouse_genomes_project 9 116399646 116409250 - Gm9917 antisense antisense MGP_CBAJ_T0005454.1 MGP_CBAJ_G0004596.1 mouse_genomes_project 9 116403687 116409253 - Gm9917 antisense antisense MGP_CBAJ_T0005455.1 MGP_CBAJ_G0004596.1 mouse_genomes_project 9 116404590 116407769 - Gm9917 antisense antisense MGP_CBAJ_T0005456.1 MGP_CBAJ_G0004596.1 mouse_genomes_project 9 116405194 116407625 - Gm9917 antisense antisense MGP_CBAJ_T0090886.1 MGP_CBAJ_G0034088.1 mouse_genomes_project 9 19619897 19629575 + MGP_CBAJ_P0090886 Mrpl4 protein_coding protein_coding MGP_CBAJ_T0092637.1 MGP_CBAJ_G0034670.1 mouse_genomes_project 9 77112444 77160501 - MGP_CBAJ_P0092637 Tex9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092638.1 MGP_CBAJ_G0034670.1 mouse_genomes_project 9 77124007 77160501 - MGP_CBAJ_P0092638 Tex9 protein_coding protein_coding MGP_CBAJ_T0092639.1 MGP_CBAJ_G0034670.1 mouse_genomes_project 9 77125775 77140483 - Tex9 protein_coding retained_intron MGP_CBAJ_T0092640.1 MGP_CBAJ_G0034670.1 mouse_genomes_project 9 77126506 77160757 - MGP_CBAJ_P0092640 Tex9 protein_coding protein_coding MGP_CBAJ_T0092641.1 MGP_CBAJ_G0034670.1 mouse_genomes_project 9 77126534 77160752 - MGP_CBAJ_P0092641 Tex9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092642.1 MGP_CBAJ_G0034670.1 mouse_genomes_project 9 77126610 77160646 - MGP_CBAJ_P0092642 Tex9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092643.1 MGP_CBAJ_G0034670.1 mouse_genomes_project 9 77126632 77160542 - MGP_CBAJ_P0092643 Tex9 protein_coding protein_coding MGP_CBAJ_T0092644.1 MGP_CBAJ_G0034670.1 mouse_genomes_project 9 77127357 77160506 - Tex9 protein_coding retained_intron MGP_CBAJ_T0092645.1 MGP_CBAJ_G0034670.1 mouse_genomes_project 9 77127376 77146751 - Tex9 protein_coding processed_transcript MGP_CBAJ_T0092646.1 MGP_CBAJ_G0034670.1 mouse_genomes_project 9 77127406 77154470 - MGP_CBAJ_P0092646 Tex9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092647.1 MGP_CBAJ_G0034670.1 mouse_genomes_project 9 77144186 77145052 - Tex9 protein_coding retained_intron MGP_CBAJ_T0092648.1 MGP_CBAJ_G0034670.1 mouse_genomes_project 9 77144286 77153229 - MGP_CBAJ_P0092648 Tex9 protein_coding protein_coding MGP_CBAJ_T0092649.1 MGP_CBAJ_G0034670.1 mouse_genomes_project 9 77144287 77160484 - MGP_CBAJ_P0092649 Tex9 protein_coding protein_coding MGP_CBAJ_T0092650.1 MGP_CBAJ_G0034670.1 mouse_genomes_project 9 77146687 77160634 - Tex9 protein_coding retained_intron MGP_CBAJ_T0092651.1 MGP_CBAJ_G0034670.1 mouse_genomes_project 9 77146866 77160480 - Tex9 protein_coding retained_intron MGP_CBAJ_T0092122.1 MGP_CBAJ_G0034542.1 mouse_genomes_project 9 61212547 61221754 + MGP_CBAJ_P0092122 Stoml1 protein_coding protein_coding MGP_CBAJ_T0091879.1 MGP_CBAJ_G0034467.1 mouse_genomes_project 9 55924132 55955945 - MGP_CBAJ_P0091879 Acat1 protein_coding protein_coding MGP_CBAJ_T0091880.1 MGP_CBAJ_G0034467.1 mouse_genomes_project 9 55926097 55927368 - Acat1 protein_coding processed_transcript MGP_CBAJ_T0091881.1 MGP_CBAJ_G0034467.1 mouse_genomes_project 9 55943433 55955893 - Acat1 protein_coding retained_intron MGP_CBAJ_T0094585.1 MGP_CBAJ_G0035038.1 mouse_genomes_project 9 124508668 124518684 + MGP_CBAJ_P0094585 Tmppe protein_coding protein_coding MGP_CBAJ_T0002383.1 MGP_CBAJ_G0002295.1 mouse_genomes_project 9 105579166 105580716 - TEC TEC MGP_CBAJ_T0015891.1 MGP_CBAJ_G0014003.1 mouse_genomes_project 9 103724371 103724612 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0091354.1 MGP_CBAJ_G0034273.1 mouse_genomes_project 9 39450920 39451851 + MGP_CBAJ_P0091354 Olfr26 protein_coding protein_coding MGP_CBAJ_T0009222.1 MGP_CBAJ_G0007401.1 mouse_genomes_project 9 116069846 116072624 + 1700039M15Rik lincRNA lincRNA MGP_CBAJ_T0090946.1 MGP_CBAJ_G0034110.1 mouse_genomes_project 9 20284088 20335831 + MGP_CBAJ_P0090946 Carm1 protein_coding protein_coding MGP_CBAJ_T0090947.1 MGP_CBAJ_G0034110.1 mouse_genomes_project 9 20284088 20335850 + MGP_CBAJ_P0090947 Carm1 protein_coding protein_coding MGP_CBAJ_T0090948.1 MGP_CBAJ_G0034110.1 mouse_genomes_project 9 20284088 20335830 + MGP_CBAJ_P0090948 Carm1 protein_coding protein_coding MGP_CBAJ_T0090949.1 MGP_CBAJ_G0034110.1 mouse_genomes_project 9 20284153 20335830 + Carm1 protein_coding retained_intron MGP_CBAJ_T0090950.1 MGP_CBAJ_G0034110.1 mouse_genomes_project 9 20284153 20335830 + MGP_CBAJ_P0090950 Carm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090951.1 MGP_CBAJ_G0034110.1 mouse_genomes_project 9 20284280 20325852 + Carm1 protein_coding processed_transcript MGP_CBAJ_T0090952.1 MGP_CBAJ_G0034110.1 mouse_genomes_project 9 20321488 20326724 + Carm1 protein_coding processed_transcript MGP_CBAJ_T0090953.1 MGP_CBAJ_G0034110.1 mouse_genomes_project 9 20333580 20334563 + Carm1 protein_coding processed_transcript MGP_CBAJ_T0090954.1 MGP_CBAJ_G0034110.1 mouse_genomes_project 9 20333765 20334492 + Carm1 protein_coding processed_transcript MGP_CBAJ_T0099613.1 MGP_CBAJ_G0037868.1 mouse_genomes_project 9 69006580 69006696 - Rnu5g snRNA snRNA MGP_CBAJ_T0099592.1 MGP_CBAJ_G0037847.1 mouse_genomes_project 9 19038016 19038130 + Gm23316 snRNA snRNA MGP_CBAJ_T0099622.1 MGP_CBAJ_G0037877.1 mouse_genomes_project 9 76737504 76737603 - Gm25045 snRNA snRNA MGP_CBAJ_T0090789.1 MGP_CBAJ_G0034039.1 mouse_genomes_project 9 17227499 17228447 + MGP_CBAJ_P0090789 Olfr830 protein_coding protein_coding MGP_CBAJ_T0093153.1 MGP_CBAJ_G0034785.1 mouse_genomes_project 9 102709908 102717139 - MGP_CBAJ_P0093153 Chst2 protein_coding protein_coding MGP_CBAJ_T0094637.1 MGP_CBAJ_G0035057.1 mouse_genomes_project 9 129177720 129266628 + MGP_CBAJ_P0094637 Golga4 protein_coding protein_coding MGP_CBAJ_T0015816.1 MGP_CBAJ_G0013928.1 mouse_genomes_project 9 62166535 62167069 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0094668.1 MGP_CBAJ_G0035064.1 mouse_genomes_project 9 129929423 129931902 + MGP_CBAJ_P0094668 Gm10608 protein_coding protein_coding MGP_CBAJ_T0002338.1 MGP_CBAJ_G0002251.1 mouse_genomes_project 9 77390699 77392191 + TEC TEC MGP_CBAJ_T0094788.1 MGP_CBAJ_G0035101.1 mouse_genomes_project 9 132840124 132846380 + MGP_CBAJ_P0094788 Klhl40 protein_coding protein_coding MGP_CBAJ_T0093564.1 MGP_CBAJ_G0034868.1 mouse_genomes_project 9 114189232 114238753 + Pik3r4 protein_coding retained_intron MGP_CBAJ_T0093565.1 MGP_CBAJ_G0034868.1 mouse_genomes_project 9 114189235 114191008 + MGP_CBAJ_P0093565 Pik3r4 protein_coding protein_coding MGP_CBAJ_T0093566.1 MGP_CBAJ_G0034868.1 mouse_genomes_project 9 114189262 114208658 + Pik3r4 protein_coding retained_intron MGP_CBAJ_T0093567.1 MGP_CBAJ_G0034868.1 mouse_genomes_project 9 114189269 114216798 + Pik3r4 protein_coding retained_intron MGP_CBAJ_T0093568.1 MGP_CBAJ_G0034868.1 mouse_genomes_project 9 114189284 114247030 + MGP_CBAJ_P0093568 Pik3r4 protein_coding protein_coding MGP_CBAJ_T0093569.1 MGP_CBAJ_G0034868.1 mouse_genomes_project 9 114189418 114247155 + MGP_CBAJ_P0093569 Pik3r4 protein_coding protein_coding MGP_CBAJ_T0093570.1 MGP_CBAJ_G0034868.1 mouse_genomes_project 9 114189449 114195058 + MGP_CBAJ_P0093570 Pik3r4 protein_coding protein_coding MGP_CBAJ_T0093571.1 MGP_CBAJ_G0034868.1 mouse_genomes_project 9 114211366 114221991 + MGP_CBAJ_P0093571 Pik3r4 protein_coding protein_coding MGP_CBAJ_T0093572.1 MGP_CBAJ_G0034868.1 mouse_genomes_project 9 114214134 114216338 + Pik3r4 protein_coding retained_intron MGP_CBAJ_T0093573.1 MGP_CBAJ_G0034868.1 mouse_genomes_project 9 114241158 114245893 + Pik3r4 protein_coding retained_intron MGP_CBAJ_T0091059.1 MGP_CBAJ_G0034156.1 mouse_genomes_project 9 26139434 26178914 - MGP_CBAJ_P0091059 Gm1110 protein_coding protein_coding MGP_CBAJ_T0092076.1 MGP_CBAJ_G0034534.1 mouse_genomes_project 9 60801267 60820320 + MGP_CBAJ_P0092076 Ubl7 protein_coding protein_coding MGP_CBAJ_T0091815.1 MGP_CBAJ_G0034447.1 mouse_genomes_project 9 52868182 52960748 + MGP_CBAJ_P0091815 Alg9 protein_coding protein_coding MGP_CBAJ_T0091816.1 MGP_CBAJ_G0034447.1 mouse_genomes_project 9 52868468 52960762 + MGP_CBAJ_P0091816 Alg9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091817.1 MGP_CBAJ_G0034447.1 mouse_genomes_project 9 52868530 52883257 + MGP_CBAJ_P0091817 Alg9 protein_coding protein_coding MGP_CBAJ_T0091818.1 MGP_CBAJ_G0034447.1 mouse_genomes_project 9 52868712 52876510 + Alg9 protein_coding processed_transcript MGP_CBAJ_T0091819.1 MGP_CBAJ_G0034447.1 mouse_genomes_project 9 52869274 52872248 + Alg9 protein_coding processed_transcript MGP_CBAJ_T0091820.1 MGP_CBAJ_G0034447.1 mouse_genomes_project 9 52910201 52959983 + MGP_CBAJ_P0091820 Alg9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091821.1 MGP_CBAJ_G0034447.1 mouse_genomes_project 9 52918949 52960582 + MGP_CBAJ_P0091821 Alg9 protein_coding protein_coding MGP_CBAJ_T0091822.1 MGP_CBAJ_G0034447.1 mouse_genomes_project 9 52934104 52960191 + Alg9 protein_coding processed_transcript MGP_CBAJ_T0091823.1 MGP_CBAJ_G0034447.1 mouse_genomes_project 9 52949347 52960311 + Alg9 protein_coding processed_transcript MGP_CBAJ_T0009246.1 MGP_CBAJ_G0007419.1 mouse_genomes_project 9 131874007 131875488 - 1700020M21Rik lincRNA lincRNA MGP_CBAJ_T0015823.1 MGP_CBAJ_G0013935.1 mouse_genomes_project 9 69760108 69760625 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0093268.1 MGP_CBAJ_G0034806.1 mouse_genomes_project 9 106106794 106136924 + MGP_CBAJ_P0093268 Rbp1 protein_coding protein_coding MGP_CBAJ_T0005349.1 MGP_CBAJ_G0004527.1 mouse_genomes_project 9 43085254 43099726 + Gm16214 antisense antisense MGP_CBAJ_T0098124.1 MGP_CBAJ_G0036397.1 mouse_genomes_project 9 110751160 110751272 + Gm25669 rRNA rRNA MGP_CBAJ_T0002418.1 MGP_CBAJ_G0002330.1 mouse_genomes_project 9 116523569 116524769 + TEC TEC MGP_CBAJ_T0099619.1 MGP_CBAJ_G0037874.1 mouse_genomes_project 9 74989032 74989131 + Gm23588 snRNA snRNA MGP_CBAJ_T0002401.1 MGP_CBAJ_G0002313.1 mouse_genomes_project 9 110221555 110226216 - TEC TEC MGP_CBAJ_T0090597.1 MGP_CBAJ_G0033972.1 mouse_genomes_project 9 4036732 4298307 - MGP_CBAJ_P0090597 Dync2h1 protein_coding protein_coding MGP_CBAJ_T0090598.1 MGP_CBAJ_G0033972.1 mouse_genomes_project 9 4036732 4290141 - MGP_CBAJ_P0090598 Dync2h1 protein_coding protein_coding MGP_CBAJ_T0090599.1 MGP_CBAJ_G0033972.1 mouse_genomes_project 9 4037533 4290052 - MGP_CBAJ_P0090599 Dync2h1 protein_coding protein_coding MGP_CBAJ_T0090600.1 MGP_CBAJ_G0033972.1 mouse_genomes_project 9 4037694 4290121 - MGP_CBAJ_P0090600 Dync2h1 protein_coding unknown_likely_coding MGP_CBAJ_T0090601.1 MGP_CBAJ_G0033972.1 mouse_genomes_project 9 4050499 4063151 - Dync2h1 protein_coding retained_intron MGP_CBAJ_T0090602.1 MGP_CBAJ_G0033972.1 mouse_genomes_project 9 4131832 4208272 - MGP_CBAJ_P0090602 Dync2h1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090603.1 MGP_CBAJ_G0033972.1 mouse_genomes_project 9 4240657 4290139 - Dync2h1 protein_coding retained_intron MGP_CBAJ_T0090604.1 MGP_CBAJ_G0033972.1 mouse_genomes_project 9 4247354 4290060 - MGP_CBAJ_P0090604 Dync2h1 protein_coding protein_coding MGP_CBAJ_T0009133.1 MGP_CBAJ_G0007330.1 mouse_genomes_project 9 46923045 46937212 - 4833428L15Rik lincRNA lincRNA MGP_CBAJ_T0094759.1 MGP_CBAJ_G0035095.1 mouse_genomes_project 9 132608293 132685070 - MGP_CBAJ_P0094759 Lyzl4 protein_coding protein_coding MGP_CBAJ_T0094760.1 MGP_CBAJ_G0035095.1 mouse_genomes_project 9 132608299 132685600 - MGP_CBAJ_P0094760 Lyzl4 protein_coding protein_coding MGP_CBAJ_T0094761.1 MGP_CBAJ_G0035095.1 mouse_genomes_project 9 132614496 132685030 - MGP_CBAJ_P0094761 Lyzl4 protein_coding protein_coding MGP_CBAJ_T0091448.1 MGP_CBAJ_G0034330.1 mouse_genomes_project 9 43018566 43195799 - MGP_CBAJ_P0091448 Sorl1 protein_coding protein_coding MGP_CBAJ_T0091449.1 MGP_CBAJ_G0034330.1 mouse_genomes_project 9 43023578 43028458 - Sorl1 protein_coding retained_intron MGP_CBAJ_T0091450.1 MGP_CBAJ_G0034330.1 mouse_genomes_project 9 43031458 43038423 - Sorl1 protein_coding retained_intron MGP_CBAJ_T0091451.1 MGP_CBAJ_G0034330.1 mouse_genomes_project 9 43038360 43039690 - Sorl1 protein_coding processed_transcript MGP_CBAJ_T0100889.1 MGP_CBAJ_G0039144.1 mouse_genomes_project 9 78604056 78604186 - Gm25105 snoRNA snoRNA MGP_CBAJ_T0091137.1 MGP_CBAJ_G0034181.1 mouse_genomes_project 9 32475559 32588817 + Ets1 protein_coding retained_intron MGP_CBAJ_T0091138.1 MGP_CBAJ_G0034181.1 mouse_genomes_project 9 32475577 32494408 + Ets1 protein_coding retained_intron MGP_CBAJ_T0091139.1 MGP_CBAJ_G0034181.1 mouse_genomes_project 9 32546359 32617273 + MGP_CBAJ_P0091139 Ets1 protein_coding protein_coding MGP_CBAJ_T0091140.1 MGP_CBAJ_G0034181.1 mouse_genomes_project 9 32546694 32620088 + MGP_CBAJ_P0091140 Ets1 protein_coding protein_coding MGP_CBAJ_T0091141.1 MGP_CBAJ_G0034181.1 mouse_genomes_project 9 32546694 32616697 + MGP_CBAJ_P0091141 Ets1 protein_coding protein_coding MGP_CBAJ_T0091614.1 MGP_CBAJ_G0034380.1 mouse_genomes_project 9 46430306 46438466 + MGP_CBAJ_P0091614 Cd3d protein_coding protein_coding MGP_CBAJ_T0005449.1 MGP_CBAJ_G0004592.1 mouse_genomes_project 9 116130165 116131624 - Gm17041 antisense antisense MGP_CBAJ_T0090876.1 MGP_CBAJ_G0034083.1 mouse_genomes_project 9 19483046 19490358 - MGP_CBAJ_P0090876 Angptl6 protein_coding protein_coding MGP_CBAJ_T0091861.1 MGP_CBAJ_G0034459.1 mouse_genomes_project 9 54319786 54381862 - MGP_CBAJ_P0091861 Zc3h12c protein_coding protein_coding MGP_CBAJ_T0091862.1 MGP_CBAJ_G0034459.1 mouse_genomes_project 9 54323206 54382276 - MGP_CBAJ_P0091862 Zc3h12c protein_coding unknown_likely_coding MGP_CBAJ_T0094598.1 MGP_CBAJ_G0035048.1 mouse_genomes_project 9 125197020 125506543 + MGP_CBAJ_P0094598 Osbpl10 protein_coding protein_coding MGP_CBAJ_T0094599.1 MGP_CBAJ_G0035048.1 mouse_genomes_project 9 125197129 125507613 + MGP_CBAJ_P0094599 Osbpl10 protein_coding protein_coding MGP_CBAJ_T0094600.1 MGP_CBAJ_G0035048.1 mouse_genomes_project 9 125226747 125432947 + MGP_CBAJ_P0094600 Osbpl10 protein_coding protein_coding MGP_CBAJ_T0094601.1 MGP_CBAJ_G0035048.1 mouse_genomes_project 9 125251791 125506539 + MGP_CBAJ_P0094601 Osbpl10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094602.1 MGP_CBAJ_G0035048.1 mouse_genomes_project 9 125296447 125314254 + MGP_CBAJ_P0094602 Osbpl10 protein_coding protein_coding MGP_CBAJ_T0094603.1 MGP_CBAJ_G0035048.1 mouse_genomes_project 9 125314220 125506543 + MGP_CBAJ_P0094603 Osbpl10 protein_coding protein_coding MGP_CBAJ_T0094604.1 MGP_CBAJ_G0035048.1 mouse_genomes_project 9 125336905 125492739 + Osbpl10 protein_coding processed_transcript MGP_CBAJ_T0094605.1 MGP_CBAJ_G0035048.1 mouse_genomes_project 9 125374625 125491133 + Osbpl10 protein_coding processed_transcript MGP_CBAJ_T0092003.1 MGP_CBAJ_G0034509.1 mouse_genomes_project 9 59662467 59663391 + MGP_CBAJ_P0092003 Imp3 protein_coding protein_coding MGP_CBAJ_T0100894.1 MGP_CBAJ_G0039149.1 mouse_genomes_project 9 91782586 91782722 + Gm25125 snoRNA snoRNA MGP_CBAJ_T0015806.1 MGP_CBAJ_G0013918.1 mouse_genomes_project 9 36802578 36802969 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0091752.1 MGP_CBAJ_G0034429.1 mouse_genomes_project 9 51485410 51814242 - MGP_CBAJ_P0091752 Ncam1 protein_coding protein_coding MGP_CBAJ_T0091753.1 MGP_CBAJ_G0034429.1 mouse_genomes_project 9 51485422 51564676 - MGP_CBAJ_P0091753 Ncam1 protein_coding protein_coding MGP_CBAJ_T0091754.1 MGP_CBAJ_G0034429.1 mouse_genomes_project 9 51490634 51814189 - MGP_CBAJ_P0091754 Ncam1 protein_coding protein_coding MGP_CBAJ_T0091755.1 MGP_CBAJ_G0034429.1 mouse_genomes_project 9 51502840 51814207 - MGP_CBAJ_P0091755 Ncam1 protein_coding protein_coding MGP_CBAJ_T0091757.1 MGP_CBAJ_G0034429.1 mouse_genomes_project 9 51509124 51532178 - MGP_CBAJ_P0091757 Ncam1 protein_coding protein_coding MGP_CBAJ_T0091758.1 MGP_CBAJ_G0034429.1 mouse_genomes_project 9 51516782 51814075 - MGP_CBAJ_P0091758 Ncam1 protein_coding protein_coding MGP_CBAJ_T0015905.1 MGP_CBAJ_G0014017.1 mouse_genomes_project 9 109438291 109438544 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005391.1 MGP_CBAJ_G0004553.1 mouse_genomes_project 9 77103305 77103995 - Gm27231 antisense antisense MGP_CBAJ_T0011626.1 MGP_CBAJ_G0009764.1 mouse_genomes_project 9 133997958 133998226 + Gm25341 misc_RNA misc_RNA MGP_CBAJ_T0091365.1 MGP_CBAJ_G0034284.1 mouse_genomes_project 9 39846825 39847761 + MGP_CBAJ_P0091365 Olfr944 protein_coding protein_coding MGP_CBAJ_T0005417.1 MGP_CBAJ_G0004570.1 mouse_genomes_project 9 103350493 103369914 - Gm16794 antisense antisense MGP_CBAJ_T0005418.1 MGP_CBAJ_G0004570.1 mouse_genomes_project 9 103351379 103365162 - Gm16794 antisense antisense MGP_CBAJ_T0005419.1 MGP_CBAJ_G0004570.1 mouse_genomes_project 9 103353430 103365171 - Gm16794 antisense antisense MGP_CBAJ_T0005420.1 MGP_CBAJ_G0004570.1 mouse_genomes_project 9 103354117 103365920 - Gm16794 antisense antisense MGP_CBAJ_T0005433.1 MGP_CBAJ_G0004580.1 mouse_genomes_project 9 107560746 107609333 + Gm16004 antisense antisense MGP_CBAJ_T0091495.1 MGP_CBAJ_G0034347.1 mouse_genomes_project 9 45417569 45419512 + MGP_CBAJ_P0091495 C1qtnf5 protein_coding protein_coding MGP_CBAJ_T0091496.1 MGP_CBAJ_G0034347.1 mouse_genomes_project 9 45417578 45419510 + MGP_CBAJ_P0091496 C1qtnf5 protein_coding protein_coding MGP_CBAJ_T0091497.1 MGP_CBAJ_G0034347.1 mouse_genomes_project 9 45417598 45419509 + MGP_CBAJ_P0091497 C1qtnf5 protein_coding protein_coding MGP_CBAJ_T0091498.1 MGP_CBAJ_G0034347.1 mouse_genomes_project 9 45417633 45418818 + MGP_CBAJ_P0091498 C1qtnf5 protein_coding protein_coding MGP_CBAJ_T0091499.1 MGP_CBAJ_G0034347.1 mouse_genomes_project 9 45417638 45419509 + MGP_CBAJ_P0091499 C1qtnf5 protein_coding protein_coding MGP_CBAJ_T0091500.1 MGP_CBAJ_G0034347.1 mouse_genomes_project 9 45417645 45418232 + MGP_CBAJ_P0091500 C1qtnf5 protein_coding protein_coding MGP_CBAJ_T0091501.1 MGP_CBAJ_G0034347.1 mouse_genomes_project 9 45417699 45419097 + MGP_CBAJ_P0091501 C1qtnf5 protein_coding protein_coding MGP_CBAJ_T0091502.1 MGP_CBAJ_G0034347.1 mouse_genomes_project 9 45417839 45418869 + MGP_CBAJ_P0091502 C1qtnf5 protein_coding protein_coding MGP_CBAJ_T0093046.1 MGP_CBAJ_G0034762.1 mouse_genomes_project 9 94906937 94957735 - MGP_CBAJ_P0093046 Gm20537 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093048.1 MGP_CBAJ_G0034762.1 mouse_genomes_project 9 94921982 94957620 - MGP_CBAJ_P0093048 Gm20537 protein_coding nonsense_mediated_decay MGP_CBAJ_T0100903.1 MGP_CBAJ_G0039158.1 mouse_genomes_project 9 107821656 107821790 + Gm23594 snoRNA snoRNA MGP_CBAJ_T0100885.1 MGP_CBAJ_G0039140.1 mouse_genomes_project 9 72496310 72496440 + Gm22382 snoRNA snoRNA MGP_CBAJ_T0091648.1 MGP_CBAJ_G0034396.1 mouse_genomes_project 9 47389555 47415309 + MGP_CBAJ_P0091648 Bace1 protein_coding protein_coding MGP_CBAJ_T0091649.1 MGP_CBAJ_G0034396.1 mouse_genomes_project 9 47389555 47413402 + MGP_CBAJ_P0091649 Bace1 protein_coding protein_coding MGP_CBAJ_T0091650.1 MGP_CBAJ_G0034396.1 mouse_genomes_project 9 47390215 47408109 + MGP_CBAJ_P0091650 Bace1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091651.1 MGP_CBAJ_G0034396.1 mouse_genomes_project 9 47390889 47405647 + Bace1 protein_coding processed_transcript MGP_CBAJ_T0091652.1 MGP_CBAJ_G0034396.1 mouse_genomes_project 9 47403662 47413144 + Bace1 protein_coding retained_intron MGP_CBAJ_T0091653.1 MGP_CBAJ_G0034396.1 mouse_genomes_project 9 47405566 47411287 + MGP_CBAJ_P0091653 Bace1 protein_coding protein_coding MGP_CBAJ_T0009244.1 MGP_CBAJ_G0007417.1 mouse_genomes_project 9 130261037 130265590 - 4930516B21Rik lincRNA lincRNA MGP_CBAJ_T0091593.1 MGP_CBAJ_G0034374.1 mouse_genomes_project 9 46231591 46237066 - Tmem25 protein_coding processed_transcript MGP_CBAJ_T0091594.1 MGP_CBAJ_G0034374.1 mouse_genomes_project 9 46231591 46237066 - MGP_CBAJ_P0091594 Tmem25 protein_coding protein_coding MGP_CBAJ_T0091595.1 MGP_CBAJ_G0034374.1 mouse_genomes_project 9 46231591 46237131 - MGP_CBAJ_P0091595 Tmem25 protein_coding protein_coding MGP_CBAJ_T0091560.1 MGP_CBAJ_G0034371.1 mouse_genomes_project 9 46107266 46149758 - MGP_CBAJ_P0091560 Phldb1 protein_coding protein_coding MGP_CBAJ_T0091561.1 MGP_CBAJ_G0034371.1 mouse_genomes_project 9 46107270 46158777 - MGP_CBAJ_P0091561 Phldb1 protein_coding protein_coding MGP_CBAJ_T0091562.1 MGP_CBAJ_G0034371.1 mouse_genomes_project 9 46107270 46135064 - MGP_CBAJ_P0091562 Phldb1 protein_coding protein_coding MGP_CBAJ_T0091563.1 MGP_CBAJ_G0034371.1 mouse_genomes_project 9 46107270 46137417 - MGP_CBAJ_P0091563 Phldb1 protein_coding protein_coding MGP_CBAJ_T0091564.1 MGP_CBAJ_G0034371.1 mouse_genomes_project 9 46107270 46149737 - MGP_CBAJ_P0091564 Phldb1 protein_coding protein_coding MGP_CBAJ_T0091565.1 MGP_CBAJ_G0034371.1 mouse_genomes_project 9 46107270 46135039 - MGP_CBAJ_P0091565 Phldb1 protein_coding protein_coding MGP_CBAJ_T0091566.1 MGP_CBAJ_G0034371.1 mouse_genomes_project 9 46107272 46123519 - MGP_CBAJ_P0091566 Phldb1 protein_coding protein_coding MGP_CBAJ_T0091567.1 MGP_CBAJ_G0034371.1 mouse_genomes_project 9 46107272 46149758 - MGP_CBAJ_P0091567 Phldb1 protein_coding protein_coding MGP_CBAJ_T0091568.1 MGP_CBAJ_G0034371.1 mouse_genomes_project 9 46107272 46138174 - MGP_CBAJ_P0091568 Phldb1 protein_coding protein_coding MGP_CBAJ_T0091569.1 MGP_CBAJ_G0034371.1 mouse_genomes_project 9 46108596 46119631 - Phldb1 protein_coding retained_intron MGP_CBAJ_T0091570.1 MGP_CBAJ_G0034371.1 mouse_genomes_project 9 46116249 46118217 - Phldb1 protein_coding retained_intron MGP_CBAJ_T0091571.1 MGP_CBAJ_G0034371.1 mouse_genomes_project 9 46119519 46125894 - MGP_CBAJ_P0091571 Phldb1 protein_coding protein_coding MGP_CBAJ_T0091572.1 MGP_CBAJ_G0034371.1 mouse_genomes_project 9 46122747 46132746 - MGP_CBAJ_P0091572 Phldb1 protein_coding protein_coding MGP_CBAJ_T0091573.1 MGP_CBAJ_G0034371.1 mouse_genomes_project 9 46125358 46130211 - MGP_CBAJ_P0091573 Phldb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091574.1 MGP_CBAJ_G0034371.1 mouse_genomes_project 9 46137917 46143219 - MGP_CBAJ_P0091574 Phldb1 protein_coding protein_coding MGP_CBAJ_T0091575.1 MGP_CBAJ_G0034371.1 mouse_genomes_project 9 46138087 46143182 - MGP_CBAJ_P0091575 Phldb1 protein_coding protein_coding MGP_CBAJ_T0091576.1 MGP_CBAJ_G0034371.1 mouse_genomes_project 9 46140125 46149008 - Phldb1 protein_coding retained_intron MGP_CBAJ_T0091577.1 MGP_CBAJ_G0034371.1 mouse_genomes_project 9 46147666 46148143 - Phldb1 protein_coding processed_transcript MGP_CBAJ_T0002321.1 MGP_CBAJ_G0002234.1 mouse_genomes_project 9 58923411 58924980 + TEC TEC MGP_CBAJ_T0091690.1 MGP_CBAJ_G0034404.1 mouse_genomes_project 9 47829040 47831352 - MGP_CBAJ_P0091690 Apoc3 protein_coding protein_coding MGP_CBAJ_T0091691.1 MGP_CBAJ_G0034404.1 mouse_genomes_project 9 47829158 47831391 - MGP_CBAJ_P0091691 Apoc3 protein_coding protein_coding MGP_CBAJ_T0091692.1 MGP_CBAJ_G0034404.1 mouse_genomes_project 9 47829305 47831728 - MGP_CBAJ_P0091692 Apoc3 protein_coding protein_coding MGP_CBAJ_T0091693.1 MGP_CBAJ_G0034404.1 mouse_genomes_project 9 47830528 47831561 - MGP_CBAJ_P0091693 Apoc3 protein_coding protein_coding MGP_CBAJ_T0091387.1 MGP_CBAJ_G0034300.1 mouse_genomes_project 9 40417432 40418462 - MGP_CBAJ_P0091387 Olfr149 protein_coding protein_coding MGP_CBAJ_T0094853.1 MGP_CBAJ_G0035126.1 mouse_genomes_project 9 134398190 134438625 - MGP_CBAJ_P0094853 Cdcp1 protein_coding protein_coding MGP_CBAJ_T0094854.1 MGP_CBAJ_G0035126.1 mouse_genomes_project 9 134400430 134405318 - Cdcp1 protein_coding retained_intron MGP_CBAJ_T0094855.1 MGP_CBAJ_G0035126.1 mouse_genomes_project 9 134407974 134438586 - Cdcp1 protein_coding retained_intron MGP_CBAJ_T0091367.1 MGP_CBAJ_G0034286.1 mouse_genomes_project 9 39912657 39913620 - MGP_CBAJ_P0091367 Olfr945 protein_coding protein_coding MGP_CBAJ_T0091893.1 MGP_CBAJ_G0034471.1 mouse_genomes_project 9 56233199 56236793 + MGP_CBAJ_P0091893 Sln protein_coding protein_coding MGP_CBAJ_T0092555.1 MGP_CBAJ_G0034658.1 mouse_genomes_project 9 75150471 75152081 + MGP_CBAJ_P0092555 Gm10642 protein_coding protein_coding MGP_CBAJ_T0092194.1 MGP_CBAJ_G0034563.1 mouse_genomes_project 9 63141990 63725189 - MGP_CBAJ_P0092194 Thsd4 protein_coding protein_coding MGP_CBAJ_T0092195.1 MGP_CBAJ_G0034563.1 mouse_genomes_project 9 63141990 63739417 - MGP_CBAJ_P0092195 Thsd4 protein_coding protein_coding MGP_CBAJ_T0092196.1 MGP_CBAJ_G0034563.1 mouse_genomes_project 9 63144758 63331287 - MGP_CBAJ_P0092196 Thsd4 protein_coding protein_coding MGP_CBAJ_T0092197.1 MGP_CBAJ_G0034563.1 mouse_genomes_project 9 63170883 63179482 - Thsd4 protein_coding retained_intron MGP_CBAJ_T0092198.1 MGP_CBAJ_G0034563.1 mouse_genomes_project 9 63648703 63750195 - MGP_CBAJ_P0092198 Thsd4 protein_coding protein_coding MGP_CBAJ_T0092199.1 MGP_CBAJ_G0034563.1 mouse_genomes_project 9 63738259 63739389 - Thsd4 protein_coding processed_transcript MGP_CBAJ_T0094699.1 MGP_CBAJ_G0035074.1 mouse_genomes_project 9 130463603 130585071 - MGP_CBAJ_P0094699 Scn10a protein_coding protein_coding MGP_CBAJ_T0002357.1 MGP_CBAJ_G0002270.1 mouse_genomes_project 9 91627827 91629668 - TEC TEC MGP_CBAJ_T0015851.1 MGP_CBAJ_G0013963.1 mouse_genomes_project 9 83877900 83878467 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0090623.1 MGP_CBAJ_G0033983.1 mouse_genomes_project 9 4829200 4836696 + MGP_CBAJ_P0090623 Mmp7 protein_coding protein_coding MGP_CBAJ_T0005367.1 MGP_CBAJ_G0004538.1 mouse_genomes_project 9 58127500 58128499 - Gm17226 antisense antisense MGP_CBAJ_T0005368.1 MGP_CBAJ_G0004538.1 mouse_genomes_project 9 58127511 58128840 - Gm17226 antisense antisense MGP_CBAJ_T0090966.1 MGP_CBAJ_G0034117.1 mouse_genomes_project 9 20589544 20649396 - MGP_CBAJ_P0090966 Dock6 protein_coding protein_coding MGP_CBAJ_T0090967.1 MGP_CBAJ_G0034117.1 mouse_genomes_project 9 20589717 20649349 - MGP_CBAJ_P0090967 Dock6 protein_coding unknown_likely_coding MGP_CBAJ_T0002354.1 MGP_CBAJ_G0002267.1 mouse_genomes_project 9 87908600 87909158 + TEC TEC MGP_CBAJ_T0092311.1 MGP_CBAJ_G0034592.1 mouse_genomes_project 9 67834373 67899190 - MGP_CBAJ_P0092311 Map2k1 protein_coding protein_coding MGP_CBAJ_T0092312.1 MGP_CBAJ_G0034592.1 mouse_genomes_project 9 67835132 67836468 - Map2k1 protein_coding retained_intron MGP_CBAJ_T0092313.1 MGP_CBAJ_G0034592.1 mouse_genomes_project 9 67835340 67836860 - Map2k1 protein_coding retained_intron MGP_CBAJ_T0092314.1 MGP_CBAJ_G0034592.1 mouse_genomes_project 9 67835892 67844336 - Map2k1 protein_coding processed_transcript MGP_CBAJ_T0010980.1 MGP_CBAJ_G0009118.1 mouse_genomes_project 9 128595541 128595636 + Gm22008 miRNA miRNA MGP_CBAJ_T0005437.1 MGP_CBAJ_G0004584.1 mouse_genomes_project 9 113866588 113872959 + antisense antisense MGP_CBAJ_T0091774.1 MGP_CBAJ_G0034439.1 mouse_genomes_project 9 52707915 52714831 + MGP_CBAJ_P0091774 Pih1d2 protein_coding protein_coding MGP_CBAJ_T0091775.1 MGP_CBAJ_G0034439.1 mouse_genomes_project 9 52707927 52713129 + Pih1d2 protein_coding retained_intron MGP_CBAJ_T0091776.1 MGP_CBAJ_G0034439.1 mouse_genomes_project 9 52707931 52712378 + MGP_CBAJ_P0091776 Pih1d2 protein_coding protein_coding MGP_CBAJ_T0091777.1 MGP_CBAJ_G0034439.1 mouse_genomes_project 9 52707977 52714834 + MGP_CBAJ_P0091777 Pih1d2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091778.1 MGP_CBAJ_G0034439.1 mouse_genomes_project 9 52708115 52709412 + Pih1d2 protein_coding retained_intron MGP_CBAJ_T0091779.1 MGP_CBAJ_G0034439.1 mouse_genomes_project 9 52708144 52711785 + MGP_CBAJ_P0091779 Pih1d2 protein_coding protein_coding MGP_CBAJ_T0091780.1 MGP_CBAJ_G0034439.1 mouse_genomes_project 9 52708601 52711660 + MGP_CBAJ_P0091780 Pih1d2 protein_coding protein_coding MGP_CBAJ_T0092372.1 MGP_CBAJ_G0034615.1 mouse_genomes_project 9 69370454 69385997 - MGP_CBAJ_P0092372 Ankdd1a protein_coding protein_coding MGP_CBAJ_T0092373.1 MGP_CBAJ_G0034615.1 mouse_genomes_project 9 69370454 69389178 - MGP_CBAJ_P0092373 Ankdd1a protein_coding unknown_likely_coding MGP_CBAJ_T0015909.1 MGP_CBAJ_G0014021.1 mouse_genomes_project 9 110759629 110759830 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015893.1 MGP_CBAJ_G0014005.1 mouse_genomes_project 9 104090256 104090461 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099599.1 MGP_CBAJ_G0037854.1 mouse_genomes_project 9 45177446 45177551 - Gm23326 snRNA snRNA MGP_CBAJ_T0091151.1 MGP_CBAJ_G0034183.1 mouse_genomes_project 9 35118507 35176426 - MGP_CBAJ_P0091151 St3gal4 protein_coding protein_coding MGP_CBAJ_T0091297.1 MGP_CBAJ_G0034227.1 mouse_genomes_project 9 38054857 38065215 - Tbrg1 protein_coding retained_intron MGP_CBAJ_T0091298.1 MGP_CBAJ_G0034227.1 mouse_genomes_project 9 38054857 38065314 - MGP_CBAJ_P0091298 Tbrg1 protein_coding protein_coding MGP_CBAJ_T0091299.1 MGP_CBAJ_G0034227.1 mouse_genomes_project 9 38057596 38065160 - Tbrg1 protein_coding retained_intron MGP_CBAJ_T0091300.1 MGP_CBAJ_G0034227.1 mouse_genomes_project 9 38059522 38065170 - Tbrg1 protein_coding retained_intron MGP_CBAJ_T0010967.1 MGP_CBAJ_G0009105.1 mouse_genomes_project 9 117005371 117005489 - miRNA miRNA MGP_CBAJ_T0094589.1 MGP_CBAJ_G0035042.1 mouse_genomes_project 9 124732064 124796360 - MGP_CBAJ_P0094589 Cnot10 protein_coding protein_coding MGP_CBAJ_T0009111.1 MGP_CBAJ_G0007311.1 mouse_genomes_project 9 24322876 24323323 + Gm29375 lincRNA lincRNA MGP_CBAJ_T0100917.1 MGP_CBAJ_G0039172.1 mouse_genomes_project 9 131033273 131033429 + Gm24044 snoRNA snoRNA MGP_CBAJ_T0010919.1 MGP_CBAJ_G0009057.1 mouse_genomes_project 9 19652533 19652611 - Mir1900 miRNA miRNA MGP_CBAJ_T0100918.1 MGP_CBAJ_G0039173.1 mouse_genomes_project 9 131033825 131034028 + Gm26448 snoRNA snoRNA MGP_CBAJ_T0090895.1 MGP_CBAJ_G0034096.1 mouse_genomes_project 9 19775528 19786869 - MGP_CBAJ_P0090895 Cdc37 protein_coding protein_coding MGP_CBAJ_T0093529.1 MGP_CBAJ_G0034865.1 mouse_genomes_project 9 113673767 113925856 - MGP_CBAJ_P0093529 Nek11 protein_coding protein_coding MGP_CBAJ_T0093530.1 MGP_CBAJ_G0034865.1 mouse_genomes_project 9 113675476 113923367 - MGP_CBAJ_P0093530 Nek11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093531.1 MGP_CBAJ_G0034865.1 mouse_genomes_project 9 113757588 113925619 - MGP_CBAJ_P0093531 Nek11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093532.1 MGP_CBAJ_G0034865.1 mouse_genomes_project 9 113821568 113925590 - MGP_CBAJ_P0093532 Nek11 protein_coding protein_coding MGP_CBAJ_T0094856.1 MGP_CBAJ_G0035127.1 mouse_genomes_project 9 134492629 134494361 - MGP_CBAJ_P0094856 Tmem158 protein_coding protein_coding MGP_CBAJ_T0015792.1 MGP_CBAJ_G0013904.1 mouse_genomes_project 9 20260391 20260750 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015878.1 MGP_CBAJ_G0013990.1 mouse_genomes_project 9 97528879 97529042 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0091944.1 MGP_CBAJ_G0034492.1 mouse_genomes_project 9 57682637 57747219 + MGP_CBAJ_P0091944 Ube2q2 protein_coding protein_coding MGP_CBAJ_T0091945.1 MGP_CBAJ_G0034492.1 mouse_genomes_project 9 57682836 57743690 + MGP_CBAJ_P0091945 Ube2q2 protein_coding protein_coding MGP_CBAJ_T0091946.1 MGP_CBAJ_G0034492.1 mouse_genomes_project 9 57728454 57743832 + Ube2q2 protein_coding retained_intron MGP_CBAJ_T0090582.1 MGP_CBAJ_G0033968.1 mouse_genomes_project 9 2189594 2206952 + MGP_CBAJ_P0090582 Casp4 protein_coding protein_coding MGP_CBAJ_T0090583.1 MGP_CBAJ_G0033968.1 mouse_genomes_project 9 2189615 2223584 + MGP_CBAJ_P0090583 Casp4 protein_coding protein_coding MGP_CBAJ_T0090584.1 MGP_CBAJ_G0033968.1 mouse_genomes_project 9 2189626 2213986 + Casp4 protein_coding retained_intron MGP_CBAJ_T0090585.1 MGP_CBAJ_G0033968.1 mouse_genomes_project 9 2189626 2211561 + MGP_CBAJ_P0090585 Casp4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090586.1 MGP_CBAJ_G0033968.1 mouse_genomes_project 9 2189631 2204979 + Casp4 protein_coding retained_intron MGP_CBAJ_T0090587.1 MGP_CBAJ_G0033968.1 mouse_genomes_project 9 2204637 2222891 + MGP_CBAJ_P0090587 Casp4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090588.1 MGP_CBAJ_G0033968.1 mouse_genomes_project 9 2206586 2210445 + Casp4 protein_coding retained_intron MGP_CBAJ_T0093266.1 MGP_CBAJ_G0034805.1 mouse_genomes_project 9 105974835 105975418 + MGP_CBAJ_P0093266 protein_coding protein_coding MGP_CBAJ_T0091474.1 MGP_CBAJ_G0034340.1 mouse_genomes_project 9 44486662 44511971 + MGP_CBAJ_P0091474 Trim29 protein_coding protein_coding MGP_CBAJ_T0005387.1 MGP_CBAJ_G0004550.1 mouse_genomes_project 9 73832696 73835266 - Gm16144 antisense antisense MGP_CBAJ_T0009135.1 MGP_CBAJ_G0007332.1 mouse_genomes_project 9 48593912 48609456 + 2900052N01Rik lincRNA lincRNA MGP_CBAJ_T0009136.1 MGP_CBAJ_G0007332.1 mouse_genomes_project 9 48594022 48609456 + 2900052N01Rik lincRNA lincRNA MGP_CBAJ_T0009137.1 MGP_CBAJ_G0007332.1 mouse_genomes_project 9 48594046 48604661 + 2900052N01Rik lincRNA lincRNA MGP_CBAJ_T0100887.1 MGP_CBAJ_G0039142.1 mouse_genomes_project 9 74578850 74578981 - Gm24257 snoRNA snoRNA MGP_CBAJ_T0009141.1 MGP_CBAJ_G0007336.1 mouse_genomes_project 9 59844219 59845017 - 2700012I20Rik lincRNA lincRNA MGP_CBAJ_T0100882.1 MGP_CBAJ_G0039137.1 mouse_genomes_project 9 67818893 67818964 + Gm22455 snoRNA snoRNA MGP_CBAJ_T0091876.1 MGP_CBAJ_G0034466.1 mouse_genomes_project 9 55874291 55917952 + MGP_CBAJ_P0091876 Npat protein_coding protein_coding MGP_CBAJ_T0091877.1 MGP_CBAJ_G0034466.1 mouse_genomes_project 9 55874396 55917787 + MGP_CBAJ_P0091877 Npat protein_coding unknown_likely_coding MGP_CBAJ_T0091878.1 MGP_CBAJ_G0034466.1 mouse_genomes_project 9 55905266 55908943 + Npat protein_coding retained_intron MGP_CBAJ_T0009166.1 MGP_CBAJ_G0007356.1 mouse_genomes_project 9 79467236 79468020 - Gm28622 lincRNA lincRNA MGP_CBAJ_T0093429.1 MGP_CBAJ_G0034845.1 mouse_genomes_project 9 111384783 111442263 + Rab6b protein_coding processed_transcript MGP_CBAJ_T0093430.1 MGP_CBAJ_G0034845.1 mouse_genomes_project 9 111384803 111464880 + MGP_CBAJ_P0093430 Rab6b protein_coding protein_coding MGP_CBAJ_T0091363.1 MGP_CBAJ_G0034282.1 mouse_genomes_project 9 39764884 39765870 + MGP_CBAJ_P0091363 Olfr27 protein_coding protein_coding MGP_CBAJ_T0092315.1 MGP_CBAJ_G0034593.1 mouse_genomes_project 9 67882902 67884064 + MGP_CBAJ_P0092315 Uchl4 protein_coding protein_coding MGP_CBAJ_T0094187.1 MGP_CBAJ_G0034965.1 mouse_genomes_project 9 117860901 117887632 + MGP_CBAJ_P0094187 Celsr3 protein_coding protein_coding MGP_CBAJ_T0094188.1 MGP_CBAJ_G0034965.1 mouse_genomes_project 9 117861699 117887638 + MGP_CBAJ_P0094188 Celsr3 protein_coding unknown_likely_coding MGP_CBAJ_T0094189.1 MGP_CBAJ_G0034965.1 mouse_genomes_project 9 117866321 117867402 + MGP_CBAJ_P0094189 Celsr3 protein_coding protein_coding MGP_CBAJ_T0094190.1 MGP_CBAJ_G0034965.1 mouse_genomes_project 9 117869053 117871156 + Celsr3 protein_coding retained_intron MGP_CBAJ_T0094191.1 MGP_CBAJ_G0034965.1 mouse_genomes_project 9 117877278 117877895 + Celsr3 protein_coding retained_intron MGP_CBAJ_T0094192.1 MGP_CBAJ_G0034965.1 mouse_genomes_project 9 117877904 117878590 + Celsr3 protein_coding retained_intron MGP_CBAJ_T0094193.1 MGP_CBAJ_G0034965.1 mouse_genomes_project 9 117877922 117883491 + MGP_CBAJ_P0094193 Celsr3 protein_coding protein_coding MGP_CBAJ_T0018273.1 MGP_CBAJ_G0015480.1 mouse_genomes_project 9 66951406 67052286 + Gm16759 processed_transcript lincRNA MGP_CBAJ_T0018274.1 MGP_CBAJ_G0015480.1 mouse_genomes_project 9 66952179 67137862 + Gm16759 processed_transcript lincRNA MGP_CBAJ_T0018275.1 MGP_CBAJ_G0015480.1 mouse_genomes_project 9 66952186 66982102 + Gm16759 processed_transcript lincRNA MGP_CBAJ_T0018276.1 MGP_CBAJ_G0015480.1 mouse_genomes_project 9 67092567 67136188 + Gm16759 processed_transcript processed_transcript MGP_CBAJ_T0018311.1 MGP_CBAJ_G0015495.1 mouse_genomes_project 9 106684883 106693159 - processed_transcript lincRNA MGP_CBAJ_T0018312.1 MGP_CBAJ_G0015495.1 mouse_genomes_project 9 106691649 106692144 - processed_transcript retained_intron MGP_CBAJ_T0018313.1 MGP_CBAJ_G0015495.1 mouse_genomes_project 9 106691731 106692658 - processed_transcript retained_intron MGP_CBAJ_T0002392.1 MGP_CBAJ_G0002304.1 mouse_genomes_project 9 108930798 108933827 + TEC TEC MGP_CBAJ_T0093435.1 MGP_CBAJ_G0034848.1 mouse_genomes_project 9 111493051 111519253 - MGP_CBAJ_P0093435 Trf protein_coding protein_coding MGP_CBAJ_T0093436.1 MGP_CBAJ_G0034848.1 mouse_genomes_project 9 111497772 111519424 - MGP_CBAJ_P0093436 Trf protein_coding protein_coding MGP_CBAJ_T0093437.1 MGP_CBAJ_G0034848.1 mouse_genomes_project 9 111498002 111500955 - Trf protein_coding retained_intron MGP_CBAJ_T0093438.1 MGP_CBAJ_G0034848.1 mouse_genomes_project 9 111499516 111508873 - MGP_CBAJ_P0093438 Trf protein_coding protein_coding MGP_CBAJ_T0093439.1 MGP_CBAJ_G0034848.1 mouse_genomes_project 9 111499584 111511078 - MGP_CBAJ_P0093439 Trf protein_coding protein_coding MGP_CBAJ_T0093440.1 MGP_CBAJ_G0034848.1 mouse_genomes_project 9 111504792 111519250 - MGP_CBAJ_P0093440 Trf protein_coding nonsense_mediated_decay MGP_CBAJ_T0093441.1 MGP_CBAJ_G0034848.1 mouse_genomes_project 9 111509901 111511690 - Trf protein_coding retained_intron MGP_CBAJ_T0093442.1 MGP_CBAJ_G0034848.1 mouse_genomes_project 9 111511111 111519246 - MGP_CBAJ_P0093442 Trf protein_coding protein_coding MGP_CBAJ_T0093443.1 MGP_CBAJ_G0034848.1 mouse_genomes_project 9 111512099 111517475 - MGP_CBAJ_P0093443 Trf protein_coding protein_coding MGP_CBAJ_T0094720.1 MGP_CBAJ_G0035085.1 mouse_genomes_project 9 131054339 131074076 + MGP_CBAJ_P0094720 Mobp protein_coding protein_coding MGP_CBAJ_T0094721.1 MGP_CBAJ_G0035085.1 mouse_genomes_project 9 131054339 131080791 + MGP_CBAJ_P0094721 Mobp protein_coding protein_coding MGP_CBAJ_T0094722.1 MGP_CBAJ_G0035085.1 mouse_genomes_project 9 131054339 131086174 + MGP_CBAJ_P0094722 Mobp protein_coding nonsense_mediated_decay MGP_CBAJ_T0091401.1 MGP_CBAJ_G0034314.1 mouse_genomes_project 9 40844587 40845553 + MGP_CBAJ_P0091401 Olfr982 protein_coding protein_coding MGP_CBAJ_T0098127.1 MGP_CBAJ_G0036400.1 mouse_genomes_project 9 125939259 125939378 - n-R5s92 rRNA rRNA MGP_CBAJ_T0009204.1 MGP_CBAJ_G0007384.1 mouse_genomes_project 9 104016086 104022896 - lincRNA lincRNA MGP_CBAJ_T0093763.1 MGP_CBAJ_G0034907.1 mouse_genomes_project 9 116387355 116391377 + MGP_CBAJ_P0093763 Zmynd10 protein_coding protein_coding MGP_CBAJ_T0093764.1 MGP_CBAJ_G0034907.1 mouse_genomes_project 9 116387361 116387927 + Zmynd10 protein_coding processed_transcript MGP_CBAJ_T0093765.1 MGP_CBAJ_G0034907.1 mouse_genomes_project 9 116387511 116391377 + MGP_CBAJ_P0093765 Zmynd10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093766.1 MGP_CBAJ_G0034907.1 mouse_genomes_project 9 116389220 116390269 + Zmynd10 protein_coding retained_intron MGP_CBAJ_T0093767.1 MGP_CBAJ_G0034907.1 mouse_genomes_project 9 116390546 116391277 + Zmynd10 protein_coding retained_intron MGP_CBAJ_T0098111.1 MGP_CBAJ_G0036384.1 mouse_genomes_project 9 10551774 10551895 + Gm25365 rRNA rRNA MGP_CBAJ_T0092211.1 MGP_CBAJ_G0034566.1 mouse_genomes_project 9 64016974 64106883 + MGP_CBAJ_P0092211 Uaca protein_coding protein_coding MGP_CBAJ_T0002416.1 MGP_CBAJ_G0002328.1 mouse_genomes_project 9 114717525 114720491 + TEC TEC MGP_CBAJ_T0005342.1 MGP_CBAJ_G0004520.1 mouse_genomes_project 9 28483210 28496864 + Gm15520 antisense antisense MGP_CBAJ_T0005356.1 MGP_CBAJ_G0004532.1 mouse_genomes_project 9 47838716 47839637 - Gm10680 antisense antisense MGP_CBAJ_T0091471.1 MGP_CBAJ_G0034338.1 mouse_genomes_project 9 44388290 44406877 - MGP_CBAJ_P0091471 Oaf protein_coding protein_coding MGP_CBAJ_T0009158.1 MGP_CBAJ_G0007349.1 mouse_genomes_project 9 74142836 74227806 + B230323A14Rik lincRNA lincRNA MGP_CBAJ_T0009159.1 MGP_CBAJ_G0007349.1 mouse_genomes_project 9 74145232 74227160 + B230323A14Rik lincRNA lincRNA MGP_CBAJ_T0010969.1 MGP_CBAJ_G0009107.1 mouse_genomes_project 9 117556568 117556642 + Mir191 miRNA miRNA MGP_CBAJ_T0094623.1 MGP_CBAJ_G0035054.1 mouse_genomes_project 9 128635775 128666658 + MGP_CBAJ_P0094623 Azi2 protein_coding protein_coding MGP_CBAJ_T0094624.1 MGP_CBAJ_G0035054.1 mouse_genomes_project 9 128635833 128665558 + MGP_CBAJ_P0094624 Azi2 protein_coding protein_coding MGP_CBAJ_T0094625.1 MGP_CBAJ_G0035054.1 mouse_genomes_project 9 128635855 128663303 + MGP_CBAJ_P0094625 Azi2 protein_coding protein_coding MGP_CBAJ_T0094626.1 MGP_CBAJ_G0035054.1 mouse_genomes_project 9 128635892 128672613 + MGP_CBAJ_P0094626 Azi2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094627.1 MGP_CBAJ_G0035054.1 mouse_genomes_project 9 128635963 128647440 + Azi2 protein_coding retained_intron MGP_CBAJ_T0094628.1 MGP_CBAJ_G0035054.1 mouse_genomes_project 9 128646534 128665308 + MGP_CBAJ_P0094628 Azi2 protein_coding protein_coding MGP_CBAJ_T0094629.1 MGP_CBAJ_G0035054.1 mouse_genomes_project 9 128646595 128648879 + Azi2 protein_coding retained_intron MGP_CBAJ_T0094630.1 MGP_CBAJ_G0035054.1 mouse_genomes_project 9 128648106 128664703 + MGP_CBAJ_P0094630 Azi2 protein_coding protein_coding MGP_CBAJ_T0094631.1 MGP_CBAJ_G0035054.1 mouse_genomes_project 9 128652769 128664605 + Azi2 protein_coding retained_intron MGP_CBAJ_T0094632.1 MGP_CBAJ_G0035054.1 mouse_genomes_project 9 128658069 128665079 + MGP_CBAJ_P0094632 Azi2 protein_coding protein_coding MGP_CBAJ_T0099639.1 MGP_CBAJ_G0037894.1 mouse_genomes_project 9 111842651 111842754 - Gm26360 snRNA snRNA MGP_CBAJ_T0005395.1 MGP_CBAJ_G0004556.1 mouse_genomes_project 9 80952854 81082474 - Gm26903 antisense antisense MGP_CBAJ_T0009126.1 MGP_CBAJ_G0007324.1 mouse_genomes_project 9 41362614 41365091 + Gm17540 lincRNA lincRNA MGP_CBAJ_T0091711.1 MGP_CBAJ_G0034411.1 mouse_genomes_project 9 49285799 49625489 + MGP_CBAJ_P0091711 Cadm1 protein_coding protein_coding MGP_CBAJ_T0091712.1 MGP_CBAJ_G0034411.1 mouse_genomes_project 9 49285837 49622695 + MGP_CBAJ_P0091712 Cadm1 protein_coding protein_coding MGP_CBAJ_T0091713.1 MGP_CBAJ_G0034411.1 mouse_genomes_project 9 49285870 49629747 + MGP_CBAJ_P0091713 Cadm1 protein_coding protein_coding MGP_CBAJ_T0091714.1 MGP_CBAJ_G0034411.1 mouse_genomes_project 9 49285883 49625484 + MGP_CBAJ_P0091714 Cadm1 protein_coding protein_coding MGP_CBAJ_T0091715.1 MGP_CBAJ_G0034411.1 mouse_genomes_project 9 49285883 49623137 + MGP_CBAJ_P0091715 Cadm1 protein_coding protein_coding MGP_CBAJ_T0091716.1 MGP_CBAJ_G0034411.1 mouse_genomes_project 9 49285978 49586985 + Cadm1 protein_coding retained_intron MGP_CBAJ_T0091717.1 MGP_CBAJ_G0034411.1 mouse_genomes_project 9 49285978 49558143 + Cadm1 protein_coding retained_intron MGP_CBAJ_T0091718.1 MGP_CBAJ_G0034411.1 mouse_genomes_project 9 49285999 49581928 + Cadm1 protein_coding processed_transcript MGP_CBAJ_T0091719.1 MGP_CBAJ_G0034411.1 mouse_genomes_project 9 49285999 49622498 + MGP_CBAJ_P0091719 Cadm1 protein_coding protein_coding MGP_CBAJ_T0093103.1 MGP_CBAJ_G0034773.1 mouse_genomes_project 9 96901020 96942534 + MGP_CBAJ_P0093103 Adamts7 protein_coding protein_coding MGP_CBAJ_T0093104.1 MGP_CBAJ_G0034773.1 mouse_genomes_project 9 96901029 96950504 + MGP_CBAJ_P0093104 Adamts7 protein_coding protein_coding MGP_CBAJ_T0093105.1 MGP_CBAJ_G0034773.1 mouse_genomes_project 9 96901075 96942534 + MGP_CBAJ_P0093105 Adamts7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093106.1 MGP_CBAJ_G0034773.1 mouse_genomes_project 9 96901153 96942424 + MGP_CBAJ_P0093106 Adamts7 protein_coding protein_coding MGP_CBAJ_T0093107.1 MGP_CBAJ_G0034773.1 mouse_genomes_project 9 96901177 96942536 + MGP_CBAJ_P0093107 Adamts7 protein_coding protein_coding MGP_CBAJ_T0093108.1 MGP_CBAJ_G0034773.1 mouse_genomes_project 9 96931089 96934000 + Adamts7 protein_coding retained_intron MGP_CBAJ_T0093109.1 MGP_CBAJ_G0034773.1 mouse_genomes_project 9 96933418 96935922 + Adamts7 protein_coding processed_transcript MGP_CBAJ_T0093110.1 MGP_CBAJ_G0034773.1 mouse_genomes_project 9 96937562 96942531 + Adamts7 protein_coding retained_intron MGP_CBAJ_T0092229.1 MGP_CBAJ_G0034569.1 mouse_genomes_project 9 65264097 65265352 - MGP_CBAJ_P0092229 Gm10073 protein_coding protein_coding MGP_CBAJ_T0092231.1 MGP_CBAJ_G0034571.1 mouse_genomes_project 9 65306053 65393094 - Paqr5 protein_coding processed_transcript MGP_CBAJ_T0092232.1 MGP_CBAJ_G0034571.1 mouse_genomes_project 9 65306310 65393149 - MGP_CBAJ_P0092232 Paqr5 protein_coding protein_coding MGP_CBAJ_T0092233.1 MGP_CBAJ_G0034571.1 mouse_genomes_project 9 65308618 65332615 - MGP_CBAJ_P0092233 Paqr5 protein_coding protein_coding MGP_CBAJ_T0092806.1 MGP_CBAJ_G0034707.1 mouse_genomes_project 9 82941865 82967228 + MGP_CBAJ_P0092806 Klhl31 protein_coding protein_coding MGP_CBAJ_T0092781.1 MGP_CBAJ_G0034705.1 mouse_genomes_project 9 82339591 82379366 - protein_coding retained_intron MGP_CBAJ_T0092782.1 MGP_CBAJ_G0034705.1 mouse_genomes_project 9 82339591 82621088 - MGP_CBAJ_P0092782 protein_coding protein_coding MGP_CBAJ_T0092783.1 MGP_CBAJ_G0034705.1 mouse_genomes_project 9 82339591 82621095 - MGP_CBAJ_P0092783 protein_coding protein_coding MGP_CBAJ_T0092784.1 MGP_CBAJ_G0034705.1 mouse_genomes_project 9 82339596 82621018 - MGP_CBAJ_P0092784 protein_coding protein_coding MGP_CBAJ_T0092785.1 MGP_CBAJ_G0034705.1 mouse_genomes_project 9 82339596 82621026 - MGP_CBAJ_P0092785 protein_coding protein_coding MGP_CBAJ_T0092786.1 MGP_CBAJ_G0034705.1 mouse_genomes_project 9 82339599 82621141 - MGP_CBAJ_P0092786 protein_coding protein_coding MGP_CBAJ_T0092787.1 MGP_CBAJ_G0034705.1 mouse_genomes_project 9 82339599 82515902 - MGP_CBAJ_P0092787 protein_coding protein_coding MGP_CBAJ_T0092788.1 MGP_CBAJ_G0034705.1 mouse_genomes_project 9 82339622 82379115 - MGP_CBAJ_P0092788 protein_coding protein_coding MGP_CBAJ_T0092789.1 MGP_CBAJ_G0034705.1 mouse_genomes_project 9 82339820 82515948 - MGP_CBAJ_P0092789 protein_coding protein_coding MGP_CBAJ_T0092790.1 MGP_CBAJ_G0034705.1 mouse_genomes_project 9 82339901 82515864 - MGP_CBAJ_P0092790 protein_coding unknown_likely_coding MGP_CBAJ_T0092791.1 MGP_CBAJ_G0034705.1 mouse_genomes_project 9 82405583 82621086 - MGP_CBAJ_P0092791 protein_coding protein_coding MGP_CBAJ_T0092792.1 MGP_CBAJ_G0034705.1 mouse_genomes_project 9 82488752 82621076 - MGP_CBAJ_P0092792 protein_coding protein_coding MGP_CBAJ_T0092793.1 MGP_CBAJ_G0034705.1 mouse_genomes_project 9 82488755 82515911 - MGP_CBAJ_P0092793 protein_coding protein_coding MGP_CBAJ_T0092794.1 MGP_CBAJ_G0034705.1 mouse_genomes_project 9 82488783 82613845 - MGP_CBAJ_P0092794 protein_coding protein_coding MGP_CBAJ_T0092795.1 MGP_CBAJ_G0034705.1 mouse_genomes_project 9 82513315 82516103 - protein_coding retained_intron MGP_CBAJ_T0092796.1 MGP_CBAJ_G0034705.1 mouse_genomes_project 9 82619666 82628480 - protein_coding processed_transcript MGP_CBAJ_T0090818.1 MGP_CBAJ_G0034068.1 mouse_genomes_project 9 18830105 18836610 + MGP_CBAJ_P0090818 Olfr39 protein_coding protein_coding MGP_CBAJ_T0092748.1 MGP_CBAJ_G0034693.1 mouse_genomes_project 9 80337963 80368353 - Mapk6 protein_coding processed_transcript MGP_CBAJ_T0092749.1 MGP_CBAJ_G0034693.1 mouse_genomes_project 9 80363409 80396157 - MGP_CBAJ_P0092749 Mapk6 protein_coding protein_coding MGP_CBAJ_T0092750.1 MGP_CBAJ_G0034693.1 mouse_genomes_project 9 80363411 80396803 - MGP_CBAJ_P0092750 Mapk6 protein_coding protein_coding MGP_CBAJ_T0092751.1 MGP_CBAJ_G0034693.1 mouse_genomes_project 9 80372407 80376926 - Mapk6 protein_coding retained_intron MGP_CBAJ_T0092752.1 MGP_CBAJ_G0034693.1 mouse_genomes_project 9 80373052 80396794 - Mapk6 protein_coding retained_intron MGP_CBAJ_T0092753.1 MGP_CBAJ_G0034693.1 mouse_genomes_project 9 80381531 80396381 - Mapk6 protein_coding processed_transcript MGP_CBAJ_T0092754.1 MGP_CBAJ_G0034693.1 mouse_genomes_project 9 80381684 80396783 - Mapk6 protein_coding processed_transcript MGP_CBAJ_T0010984.1 MGP_CBAJ_G0009122.1 mouse_genomes_project 9 133861096 133861195 + Mir138-1 miRNA miRNA MGP_CBAJ_T0094254.1 MGP_CBAJ_G0034973.1 mouse_genomes_project 9 118054191 118072338 - MGP_CBAJ_P0094254 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094256.1 MGP_CBAJ_G0034973.1 mouse_genomes_project 9 118054194 118072387 - protein_coding retained_intron MGP_CBAJ_T0094258.1 MGP_CBAJ_G0034973.1 mouse_genomes_project 9 118054728 118056597 - MGP_CBAJ_P0094258 protein_coding protein_coding MGP_CBAJ_T0091397.1 MGP_CBAJ_G0034310.1 mouse_genomes_project 9 40690833 40691766 - MGP_CBAJ_P0091397 Olfr975 protein_coding protein_coding MGP_CBAJ_T0009108.1 MGP_CBAJ_G0007308.1 mouse_genomes_project 9 20483331 20492233 - lincRNA lincRNA MGP_CBAJ_T0091749.1 MGP_CBAJ_G0034427.1 mouse_genomes_project 9 51392302 51405312 - MGP_CBAJ_P0091749 Ankk1 protein_coding protein_coding MGP_CBAJ_T0092828.1 MGP_CBAJ_G0034714.1 mouse_genomes_project 9 83619258 83643363 + MGP_CBAJ_P0092828 protein_coding protein_coding MGP_CBAJ_T0092045.1 MGP_CBAJ_G0034519.1 mouse_genomes_project 9 60263933 60290976 - MGP_CBAJ_P0092045 Scamp5 protein_coding unknown_likely_coding MGP_CBAJ_T0091895.1 MGP_CBAJ_G0034473.1 mouse_genomes_project 9 56298178 56370354 - MGP_CBAJ_P0091895 Elmod1 protein_coding protein_coding MGP_CBAJ_T0091896.1 MGP_CBAJ_G0034473.1 mouse_genomes_project 9 56298178 56329130 - MGP_CBAJ_P0091896 Elmod1 protein_coding protein_coding MGP_CBAJ_T0002375.1 MGP_CBAJ_G0002287.1 mouse_genomes_project 9 98196917 98197657 - TEC TEC MGP_CBAJ_T0015873.1 MGP_CBAJ_G0013985.1 mouse_genomes_project 9 96736150 96736793 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0091366.1 MGP_CBAJ_G0034285.1 mouse_genomes_project 9 39889790 39890735 - MGP_CBAJ_P0091366 Olfr1537 protein_coding protein_coding MGP_CBAJ_T0018284.1 MGP_CBAJ_G0015485.1 mouse_genomes_project 9 79762887 79770005 + Gm16551 processed_transcript lincRNA MGP_CBAJ_T0018285.1 MGP_CBAJ_G0015485.1 mouse_genomes_project 9 79765553 79779470 + Gm16551 processed_transcript lincRNA MGP_CBAJ_T0018286.1 MGP_CBAJ_G0015485.1 mouse_genomes_project 9 79765619 79766484 + Gm16551 processed_transcript retained_intron MGP_CBAJ_T0018287.1 MGP_CBAJ_G0015485.1 mouse_genomes_project 9 79765642 79770004 + Gm16551 processed_transcript lincRNA MGP_CBAJ_T0018288.1 MGP_CBAJ_G0015485.1 mouse_genomes_project 9 79766111 79768336 + Gm16551 processed_transcript retained_intron MGP_CBAJ_T0100900.1 MGP_CBAJ_G0039155.1 mouse_genomes_project 9 102981884 102981994 + Gm25582 snoRNA snoRNA MGP_CBAJ_T0094857.1 MGP_CBAJ_G0035128.1 mouse_genomes_project 9 134617276 134740421 + MGP_CBAJ_P0094857 Lars2 protein_coding protein_coding MGP_CBAJ_T0092175.1 MGP_CBAJ_G0034560.1 mouse_genomes_project 9 62875089 62893218 - MGP_CBAJ_P0092175 Senp8 protein_coding protein_coding MGP_CBAJ_T0092176.1 MGP_CBAJ_G0034560.1 mouse_genomes_project 9 62875089 62893218 - MGP_CBAJ_P0092176 Senp8 protein_coding protein_coding MGP_CBAJ_T0018253.1 MGP_CBAJ_G0015476.1 mouse_genomes_project 9 42327129 42582571 + processed_transcript lincRNA MGP_CBAJ_T0018254.1 MGP_CBAJ_G0015476.1 mouse_genomes_project 9 42327258 42466375 + processed_transcript lincRNA MGP_CBAJ_T0018255.1 MGP_CBAJ_G0015476.1 mouse_genomes_project 9 42327293 42403738 + processed_transcript lincRNA MGP_CBAJ_T0018256.1 MGP_CBAJ_G0015476.1 mouse_genomes_project 9 42452823 42583028 + processed_transcript lincRNA MGP_CBAJ_T0018257.1 MGP_CBAJ_G0015476.1 mouse_genomes_project 9 42452931 42610965 + processed_transcript lincRNA MGP_CBAJ_T0018258.1 MGP_CBAJ_G0015476.1 mouse_genomes_project 9 42572212 42585380 + processed_transcript lincRNA MGP_CBAJ_T0018259.1 MGP_CBAJ_G0015476.1 mouse_genomes_project 9 42572693 42585383 + processed_transcript lincRNA MGP_CBAJ_T0018260.1 MGP_CBAJ_G0015476.1 mouse_genomes_project 9 42573409 42585381 + processed_transcript processed_transcript MGP_CBAJ_T0018261.1 MGP_CBAJ_G0015476.1 mouse_genomes_project 9 42573920 42608545 + processed_transcript lincRNA MGP_CBAJ_T0018262.1 MGP_CBAJ_G0015476.1 mouse_genomes_project 9 42573934 42610769 + processed_transcript lincRNA MGP_CBAJ_T0018263.1 MGP_CBAJ_G0015476.1 mouse_genomes_project 9 42574006 42585040 + processed_transcript lincRNA MGP_CBAJ_T0018264.1 MGP_CBAJ_G0015476.1 mouse_genomes_project 9 42581047 42585291 + processed_transcript retained_intron MGP_CBAJ_T0018265.1 MGP_CBAJ_G0015476.1 mouse_genomes_project 9 42592969 42608511 + processed_transcript lincRNA MGP_CBAJ_T0018266.1 MGP_CBAJ_G0015476.1 mouse_genomes_project 9 42610016 42613550 + processed_transcript retained_intron MGP_CBAJ_T0090992.1 MGP_CBAJ_G0034130.1 mouse_genomes_project 9 20908215 20926852 - MGP_CBAJ_P0090992 Ecsit protein_coding protein_coding MGP_CBAJ_T0090993.1 MGP_CBAJ_G0034130.1 mouse_genomes_project 9 20908215 20926863 - MGP_CBAJ_P0090993 Ecsit protein_coding protein_coding MGP_CBAJ_T0090994.1 MGP_CBAJ_G0034130.1 mouse_genomes_project 9 20908215 20926827 - MGP_CBAJ_P0090994 Ecsit protein_coding protein_coding MGP_CBAJ_T0090995.1 MGP_CBAJ_G0034130.1 mouse_genomes_project 9 20909457 20926852 - MGP_CBAJ_P0090995 Ecsit protein_coding protein_coding MGP_CBAJ_T0090682.1 MGP_CBAJ_G0034001.1 mouse_genomes_project 9 11586155 11605352 - MGP_CBAJ_P0090682 Cep57 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090683.1 MGP_CBAJ_G0034001.1 mouse_genomes_project 9 11586158 11605413 - MGP_CBAJ_P0090683 Cep57 protein_coding protein_coding MGP_CBAJ_T0090684.1 MGP_CBAJ_G0034001.1 mouse_genomes_project 9 11586160 11605529 - MGP_CBAJ_P0090684 Cep57 protein_coding protein_coding MGP_CBAJ_T0090685.1 MGP_CBAJ_G0034001.1 mouse_genomes_project 9 11586188 11605316 - MGP_CBAJ_P0090685 Cep57 protein_coding protein_coding MGP_CBAJ_T0090686.1 MGP_CBAJ_G0034001.1 mouse_genomes_project 9 11586912 11605386 - MGP_CBAJ_P0090686 Cep57 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090687.1 MGP_CBAJ_G0034001.1 mouse_genomes_project 9 11587110 11588778 - Cep57 protein_coding retained_intron MGP_CBAJ_T0090688.1 MGP_CBAJ_G0034001.1 mouse_genomes_project 9 11587179 11597029 - MGP_CBAJ_P0090688 Cep57 protein_coding protein_coding MGP_CBAJ_T0090689.1 MGP_CBAJ_G0034001.1 mouse_genomes_project 9 11589083 11597273 - MGP_CBAJ_P0090689 Cep57 protein_coding protein_coding MGP_CBAJ_T0090690.1 MGP_CBAJ_G0034001.1 mouse_genomes_project 9 11591419 11597309 - Cep57 protein_coding retained_intron MGP_CBAJ_T0090691.1 MGP_CBAJ_G0034001.1 mouse_genomes_project 9 11591795 11605414 - MGP_CBAJ_P0090691 Cep57 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090692.1 MGP_CBAJ_G0034001.1 mouse_genomes_project 9 11591810 11594761 - Cep57 protein_coding retained_intron MGP_CBAJ_T0005435.1 MGP_CBAJ_G0004582.1 mouse_genomes_project 9 111872835 111881625 + 4932413F04Rik antisense antisense MGP_CBAJ_T0090666.1 MGP_CBAJ_G0033996.1 mouse_genomes_project 9 11048398 11053178 - MGP_CBAJ_P0090666 Jrkl protein_coding protein_coding MGP_CBAJ_T0009242.1 MGP_CBAJ_G0007415.1 mouse_genomes_project 9 129050341 129052340 - Platr11 lincRNA lincRNA MGP_CBAJ_T0005463.1 MGP_CBAJ_G0004603.1 mouse_genomes_project 9 118101174 118105157 - Gm7628 antisense antisense MGP_CBAJ_T0015863.1 MGP_CBAJ_G0013975.1 mouse_genomes_project 9 91350764 91351209 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0091215.1 MGP_CBAJ_G0034204.1 mouse_genomes_project 9 36680757 36683813 + MGP_CBAJ_P0091215 Gm7257 protein_coding protein_coding MGP_CBAJ_T0015833.1 MGP_CBAJ_G0013945.1 mouse_genomes_project 9 77298150 77298967 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018295.1 MGP_CBAJ_G0015490.1 mouse_genomes_project 9 92164742 92188655 - 9330154J02Rik processed_transcript antisense MGP_CBAJ_T0018296.1 MGP_CBAJ_G0015490.1 mouse_genomes_project 9 92164742 92187809 - 9330154J02Rik processed_transcript processed_transcript MGP_CBAJ_T0018297.1 MGP_CBAJ_G0015490.1 mouse_genomes_project 9 92164803 92188847 - 9330154J02Rik processed_transcript antisense MGP_CBAJ_T0018298.1 MGP_CBAJ_G0015490.1 mouse_genomes_project 9 92166027 92187808 - 9330154J02Rik processed_transcript retained_intron MGP_CBAJ_T0009112.1 MGP_CBAJ_G0007312.1 mouse_genomes_project 9 26480930 26481341 - Gm29172 lincRNA lincRNA MGP_CBAJ_T0090780.1 MGP_CBAJ_G0034033.1 mouse_genomes_project 9 16745763 16773013 - MGP_CBAJ_P0090780 Zfp558 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090781.1 MGP_CBAJ_G0034033.1 mouse_genomes_project 9 16746380 16768306 - MGP_CBAJ_P0090781 Zfp558 protein_coding protein_coding MGP_CBAJ_T0090782.1 MGP_CBAJ_G0034033.1 mouse_genomes_project 9 16749845 16773018 - Zfp558 protein_coding processed_transcript MGP_CBAJ_T0090783.1 MGP_CBAJ_G0034033.1 mouse_genomes_project 9 16767636 16768169 - Zfp558 protein_coding processed_transcript MGP_CBAJ_T0092668.1 MGP_CBAJ_G0034673.1 mouse_genomes_project 9 77527816 77659777 + MGP_CBAJ_P0092668 Prtg protein_coding protein_coding MGP_CBAJ_T0092669.1 MGP_CBAJ_G0034673.1 mouse_genomes_project 9 77653120 77654798 + Prtg protein_coding retained_intron MGP_CBAJ_T0091006.1 MGP_CBAJ_G0034136.1 mouse_genomes_project 9 21086852 21111369 + MGP_CBAJ_P0091006 Zfp809 protein_coding protein_coding MGP_CBAJ_T0002405.1 MGP_CBAJ_G0002317.1 mouse_genomes_project 9 111393370 111395844 + TEC TEC MGP_CBAJ_T0094259.1 MGP_CBAJ_G0034975.1 mouse_genomes_project 9 118056005 118072391 - MGP_CBAJ_P0094259 Atrip protein_coding protein_coding MGP_CBAJ_T0094260.1 MGP_CBAJ_G0034975.1 mouse_genomes_project 9 118056043 118072319 - MGP_CBAJ_P0094260 Atrip protein_coding protein_coding MGP_CBAJ_T0094261.1 MGP_CBAJ_G0034975.1 mouse_genomes_project 9 118056068 118058335 - Atrip protein_coding retained_intron MGP_CBAJ_T0094262.1 MGP_CBAJ_G0034975.1 mouse_genomes_project 9 118056919 118061437 - MGP_CBAJ_P0094262 Atrip protein_coding protein_coding MGP_CBAJ_T0094263.1 MGP_CBAJ_G0034975.1 mouse_genomes_project 9 118065547 118067590 - Atrip protein_coding retained_intron MGP_CBAJ_T0094264.1 MGP_CBAJ_G0034975.1 mouse_genomes_project 9 118069993 118072333 - Atrip protein_coding retained_intron MGP_CBAJ_T0010921.1 MGP_CBAJ_G0009059.1 mouse_genomes_project 9 20220091 20220161 - Mir199a-1 miRNA miRNA MGP_CBAJ_T0099591.1 MGP_CBAJ_G0037846.1 mouse_genomes_project 9 18743326 18743471 - Gm26290 snRNA snRNA MGP_CBAJ_T0009105.1 MGP_CBAJ_G0007305.1 mouse_genomes_project 9 19183591 19188317 - Gm26521 lincRNA lincRNA MGP_CBAJ_T0100888.1 MGP_CBAJ_G0039143.1 mouse_genomes_project 9 74942093 74942206 + Gm24615 snoRNA snoRNA MGP_CBAJ_T0009211.1 MGP_CBAJ_G0007391.1 mouse_genomes_project 9 108253960 108255848 - Gm28167 lincRNA lincRNA MGP_CBAJ_T0015829.1 MGP_CBAJ_G0013941.1 mouse_genomes_project 9 76796570 76796949 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0091123.1 MGP_CBAJ_G0034175.1 mouse_genomes_project 9 31097504 31142208 - MGP_CBAJ_P0091123 Tmem45b protein_coding protein_coding MGP_CBAJ_T0099645.1 MGP_CBAJ_G0037900.1 mouse_genomes_project 9 124750187 124750292 - Gm23232 snRNA snRNA MGP_CBAJ_T0000318.1 MGP_CBAJ_G0000263.1 mouse_genomes_project 9 134328555 134328622 - mt-Tw Mt_tRNA Mt_tRNA MGP_CBAJ_T0092765.1 MGP_CBAJ_G0034700.1 mouse_genomes_project 9 81082136 81217603 + MGP_CBAJ_P0092765 Hmgcll1 protein_coding protein_coding MGP_CBAJ_T0092766.1 MGP_CBAJ_G0034700.1 mouse_genomes_project 9 81082136 81217603 + MGP_CBAJ_P0092766 Hmgcll1 protein_coding protein_coding MGP_CBAJ_T0092767.1 MGP_CBAJ_G0034700.1 mouse_genomes_project 9 81082265 81215441 + MGP_CBAJ_P0092767 Hmgcll1 protein_coding protein_coding MGP_CBAJ_T0092768.1 MGP_CBAJ_G0034700.1 mouse_genomes_project 9 81082295 81148158 + Hmgcll1 protein_coding retained_intron MGP_CBAJ_T0092769.1 MGP_CBAJ_G0034700.1 mouse_genomes_project 9 81082296 81144857 + Hmgcll1 protein_coding retained_intron MGP_CBAJ_T0092770.1 MGP_CBAJ_G0034700.1 mouse_genomes_project 9 81082300 81126591 + Hmgcll1 protein_coding retained_intron MGP_CBAJ_T0092771.1 MGP_CBAJ_G0034700.1 mouse_genomes_project 9 81082336 81215352 + MGP_CBAJ_P0092771 Hmgcll1 protein_coding protein_coding MGP_CBAJ_T0002313.1 MGP_CBAJ_G0002226.1 mouse_genomes_project 9 32347193 32349009 - TEC TEC MGP_CBAJ_T0011623.1 MGP_CBAJ_G0009761.1 mouse_genomes_project 9 128920780 128921087 + Gm22198 misc_RNA misc_RNA MGP_CBAJ_T0015844.1 MGP_CBAJ_G0013956.1 mouse_genomes_project 9 81947359 81948257 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002374.1 MGP_CBAJ_G0002286.1 mouse_genomes_project 9 98179656 98181483 - TEC TEC MGP_CBAJ_T0100910.1 MGP_CBAJ_G0039165.1 mouse_genomes_project 9 117387700 117387809 - Gm25456 snoRNA snoRNA MGP_CBAJ_T0093999.1 MGP_CBAJ_G0034937.1 mouse_genomes_project 9 116984252 116993300 - MGP_CBAJ_P0093999 Apeh protein_coding protein_coding MGP_CBAJ_T0094000.1 MGP_CBAJ_G0034937.1 mouse_genomes_project 9 116984262 116984877 - Apeh protein_coding retained_intron MGP_CBAJ_T0094001.1 MGP_CBAJ_G0034937.1 mouse_genomes_project 9 116984262 116993320 - Apeh protein_coding retained_intron MGP_CBAJ_T0094002.1 MGP_CBAJ_G0034937.1 mouse_genomes_project 9 116984762 116985317 - Apeh protein_coding retained_intron MGP_CBAJ_T0094003.1 MGP_CBAJ_G0034937.1 mouse_genomes_project 9 116984996 116987369 - Apeh protein_coding retained_intron MGP_CBAJ_T0094004.1 MGP_CBAJ_G0034937.1 mouse_genomes_project 9 116985624 116993330 - Apeh protein_coding retained_intron MGP_CBAJ_T0094005.1 MGP_CBAJ_G0034937.1 mouse_genomes_project 9 116991201 116992874 - Apeh protein_coding retained_intron MGP_CBAJ_T0094006.1 MGP_CBAJ_G0034937.1 mouse_genomes_project 9 116991480 116993333 - MGP_CBAJ_P0094006 Apeh protein_coding protein_coding MGP_CBAJ_T0091742.1 MGP_CBAJ_G0034424.1 mouse_genomes_project 9 51027690 51031559 + Tmprss5 protein_coding retained_intron MGP_CBAJ_T0091743.1 MGP_CBAJ_G0034424.1 mouse_genomes_project 9 51027690 51044520 + MGP_CBAJ_P0091743 Tmprss5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091744.1 MGP_CBAJ_G0034424.1 mouse_genomes_project 9 51027783 51043926 + MGP_CBAJ_P0091744 Tmprss5 protein_coding protein_coding MGP_CBAJ_T0091745.1 MGP_CBAJ_G0034424.1 mouse_genomes_project 9 51027783 51043926 + MGP_CBAJ_P0091745 Tmprss5 protein_coding protein_coding MGP_CBAJ_T0091746.1 MGP_CBAJ_G0034424.1 mouse_genomes_project 9 51035936 51044520 + MGP_CBAJ_P0091746 Tmprss5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0002323.1 MGP_CBAJ_G0002236.1 mouse_genomes_project 9 61554168 61555199 + TEC TEC MGP_CBAJ_T0009210.1 MGP_CBAJ_G0007390.1 mouse_genomes_project 9 107908218 107923000 + 4930519F24Rik lincRNA lincRNA MGP_CBAJ_T0005434.1 MGP_CBAJ_G0004581.1 mouse_genomes_project 9 111781389 111802079 + Gm16252 antisense antisense MGP_CBAJ_T0092755.1 MGP_CBAJ_G0034694.1 mouse_genomes_project 9 80432901 80460466 + MGP_CBAJ_P0092755 Leo1 protein_coding protein_coding MGP_CBAJ_T0090615.1 MGP_CBAJ_G0033977.1 mouse_genomes_project 9 4569727 4580014 + MGP_CBAJ_P0090615 Mmp3 protein_coding protein_coding MGP_CBAJ_T0091322.1 MGP_CBAJ_G0034247.1 mouse_genomes_project 9 38789997 38790948 + MGP_CBAJ_P0091322 Olfr895 protein_coding protein_coding MGP_CBAJ_T0090784.1 MGP_CBAJ_G0034034.1 mouse_genomes_project 9 16773128 16786609 + MGP_CBAJ_P0090784 Mbd3l1 protein_coding protein_coding MGP_CBAJ_T0005389.1 MGP_CBAJ_G0004552.1 mouse_genomes_project 9 77014989 77070568 - BC065403 antisense antisense MGP_CBAJ_T0005390.1 MGP_CBAJ_G0004552.1 mouse_genomes_project 9 77069267 77070490 - BC065403 antisense antisense MGP_CBAJ_T0015907.1 MGP_CBAJ_G0014019.1 mouse_genomes_project 9 109555847 109556700 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0091729.1 MGP_CBAJ_G0034417.1 mouse_genomes_project 9 50333372 50333992 + MGP_CBAJ_P0091729 Gm5617 protein_coding protein_coding MGP_CBAJ_T0090868.1 MGP_CBAJ_G0034080.1 mouse_genomes_project 9 19370276 19417852 - MGP_CBAJ_P0090868 Col5a3 protein_coding protein_coding MGP_CBAJ_T0090869.1 MGP_CBAJ_G0034080.1 mouse_genomes_project 9 19385343 19417852 - Col5a3 protein_coding retained_intron MGP_CBAJ_T0002316.1 MGP_CBAJ_G0002229.1 mouse_genomes_project 9 34441891 34461026 - TEC TEC MGP_CBAJ_T0015848.1 MGP_CBAJ_G0013960.1 mouse_genomes_project 9 82331204 82333406 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099603.1 MGP_CBAJ_G0037858.1 mouse_genomes_project 9 48285153 48285260 - Gm22805 snRNA snRNA MGP_CBAJ_T0002385.1 MGP_CBAJ_G0002297.1 mouse_genomes_project 9 106402268 106402784 - TEC TEC MGP_CBAJ_T0094712.1 MGP_CBAJ_G0035083.1 mouse_genomes_project 9 131015439 131029407 + MGP_CBAJ_P0094712 Slc25a38 protein_coding protein_coding MGP_CBAJ_T0094713.1 MGP_CBAJ_G0035083.1 mouse_genomes_project 9 131015470 131025633 + MGP_CBAJ_P0094713 Slc25a38 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094714.1 MGP_CBAJ_G0035083.1 mouse_genomes_project 9 131015473 131025262 + Slc25a38 protein_coding processed_transcript MGP_CBAJ_T0094715.1 MGP_CBAJ_G0035083.1 mouse_genomes_project 9 131015473 131016663 + Slc25a38 protein_coding processed_transcript MGP_CBAJ_T0094716.1 MGP_CBAJ_G0035083.1 mouse_genomes_project 9 131015489 131028554 + MGP_CBAJ_P0094716 Slc25a38 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094717.1 MGP_CBAJ_G0035083.1 mouse_genomes_project 9 131019831 131027152 + MGP_CBAJ_P0094717 Slc25a38 protein_coding protein_coding MGP_CBAJ_T0094718.1 MGP_CBAJ_G0035083.1 mouse_genomes_project 9 131019970 131025237 + Slc25a38 protein_coding processed_transcript MGP_CBAJ_T0092125.1 MGP_CBAJ_G0034545.1 mouse_genomes_project 9 61484095 61497199 + MGP_CBAJ_P0092125 6030419C18Rik protein_coding protein_coding MGP_CBAJ_T0010952.1 MGP_CBAJ_G0009090.1 mouse_genomes_project 9 73811416 73811504 + Mir3109 miRNA miRNA MGP_CBAJ_T0005478.1 MGP_CBAJ_G0004615.1 mouse_genomes_project 9 131887371 131893713 - 4930593C16Rik antisense antisense MGP_CBAJ_T0009196.1 MGP_CBAJ_G0007380.1 mouse_genomes_project 9 99931415 99953345 + Gm28054 lincRNA lincRNA MGP_CBAJ_T0090730.1 MGP_CBAJ_G0034015.1 mouse_genomes_project 9 12933044 12983783 - MGP_CBAJ_P0090730 Panx1 protein_coding protein_coding MGP_CBAJ_T0090731.1 MGP_CBAJ_G0034015.1 mouse_genomes_project 9 12933046 12984224 - MGP_CBAJ_P0090731 Panx1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090732.1 MGP_CBAJ_G0034015.1 mouse_genomes_project 9 12935179 12937769 - Panx1 protein_coding retained_intron MGP_CBAJ_T0091947.1 MGP_CBAJ_G0034493.1 mouse_genomes_project 9 57752839 57771814 + MGP_CBAJ_P0091947 Fbxo22 protein_coding protein_coding MGP_CBAJ_T0091948.1 MGP_CBAJ_G0034493.1 mouse_genomes_project 9 57752900 57771812 + MGP_CBAJ_P0091948 Fbxo22 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091949.1 MGP_CBAJ_G0034493.1 mouse_genomes_project 9 57752902 57771805 + MGP_CBAJ_P0091949 Fbxo22 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091950.1 MGP_CBAJ_G0034493.1 mouse_genomes_project 9 57753104 57771812 + MGP_CBAJ_P0091950 Fbxo22 protein_coding protein_coding MGP_CBAJ_T0091951.1 MGP_CBAJ_G0034493.1 mouse_genomes_project 9 57757544 57767362 + MGP_CBAJ_P0091951 Fbxo22 protein_coding protein_coding MGP_CBAJ_T0094787.1 MGP_CBAJ_G0035100.1 mouse_genomes_project 9 132818351 132830082 + MGP_CBAJ_P0094787 Zfp651 protein_coding protein_coding MGP_CBAJ_T0101199.1 MGP_CBAJ_G0039359.1 mouse_genomes_project 9 119231361 119239793 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101200.1 MGP_CBAJ_G0039359.1 mouse_genomes_project 9 119233596 119239797 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101201.1 MGP_CBAJ_G0039359.1 mouse_genomes_project 9 119233794 119238485 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0015930.1 MGP_CBAJ_G0014042.1 mouse_genomes_project 9 131287453 131287880 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0090811.1 MGP_CBAJ_G0034061.1 mouse_genomes_project 9 18379829 18383309 - MGP_CBAJ_P0090811 Olfr862 protein_coding protein_coding MGP_CBAJ_T0094826.1 MGP_CBAJ_G0035116.1 mouse_genomes_project 9 134038460 134050038 - MGP_CBAJ_P0094826 Zfp445 protein_coding protein_coding MGP_CBAJ_T0090797.1 MGP_CBAJ_G0034047.1 mouse_genomes_project 9 17744274 17745216 + MGP_CBAJ_P0090797 Olfr845 protein_coding protein_coding MGP_CBAJ_T0094733.1 MGP_CBAJ_G0035091.1 mouse_genomes_project 9 131892127 131914003 + MGP_CBAJ_P0094733 Ctnnb1 protein_coding protein_coding MGP_CBAJ_T0094734.1 MGP_CBAJ_G0035091.1 mouse_genomes_project 9 131896323 131923875 + MGP_CBAJ_P0094734 Ctnnb1 protein_coding protein_coding MGP_CBAJ_T0094735.1 MGP_CBAJ_G0035091.1 mouse_genomes_project 9 131896398 131923874 + MGP_CBAJ_P0094735 Ctnnb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094736.1 MGP_CBAJ_G0035091.1 mouse_genomes_project 9 131896409 131919815 + Ctnnb1 protein_coding retained_intron MGP_CBAJ_T0094737.1 MGP_CBAJ_G0035091.1 mouse_genomes_project 9 131896501 131923874 + MGP_CBAJ_P0094737 Ctnnb1 protein_coding protein_coding MGP_CBAJ_T0094738.1 MGP_CBAJ_G0035091.1 mouse_genomes_project 9 131896546 131915078 + MGP_CBAJ_P0094738 Ctnnb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094739.1 MGP_CBAJ_G0035091.1 mouse_genomes_project 9 131896741 131914661 + MGP_CBAJ_P0094739 Ctnnb1 protein_coding protein_coding MGP_CBAJ_T0094740.1 MGP_CBAJ_G0035091.1 mouse_genomes_project 9 131913588 131922885 + MGP_CBAJ_P0094740 Ctnnb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094741.1 MGP_CBAJ_G0035091.1 mouse_genomes_project 9 131914456 131918767 + MGP_CBAJ_P0094741 Ctnnb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094742.1 MGP_CBAJ_G0035091.1 mouse_genomes_project 9 131918492 131919209 + Ctnnb1 protein_coding processed_transcript MGP_CBAJ_T0094743.1 MGP_CBAJ_G0035091.1 mouse_genomes_project 9 131918664 131921007 + Ctnnb1 protein_coding processed_transcript MGP_CBAJ_T0094744.1 MGP_CBAJ_G0035091.1 mouse_genomes_project 9 131918824 131920902 + MGP_CBAJ_P0094744 Ctnnb1 protein_coding protein_coding MGP_CBAJ_T0094745.1 MGP_CBAJ_G0035091.1 mouse_genomes_project 9 131919281 131922393 + MGP_CBAJ_P0094745 Ctnnb1 protein_coding protein_coding MGP_CBAJ_T0094746.1 MGP_CBAJ_G0035091.1 mouse_genomes_project 9 131920234 131921192 + Ctnnb1 protein_coding retained_intron MGP_CBAJ_T0092496.1 MGP_CBAJ_G0034644.1 mouse_genomes_project 9 72921220 72932877 + Rora protein_coding processed_transcript MGP_CBAJ_T0092497.1 MGP_CBAJ_G0034644.1 mouse_genomes_project 9 72921220 73738132 + MGP_CBAJ_P0092497 Rora protein_coding protein_coding MGP_CBAJ_T0092498.1 MGP_CBAJ_G0034644.1 mouse_genomes_project 9 72921325 73714433 + MGP_CBAJ_P0092498 Rora protein_coding nonsense_mediated_decay MGP_CBAJ_T0092499.1 MGP_CBAJ_G0034644.1 mouse_genomes_project 9 72922737 72932091 + Rora protein_coding processed_transcript MGP_CBAJ_T0092500.1 MGP_CBAJ_G0034644.1 mouse_genomes_project 9 73526159 73584823 + Rora protein_coding processed_transcript MGP_CBAJ_T0092501.1 MGP_CBAJ_G0034644.1 mouse_genomes_project 9 73632969 73729688 + MGP_CBAJ_P0092501 Rora protein_coding protein_coding MGP_CBAJ_T0092439.1 MGP_CBAJ_G0034631.1 mouse_genomes_project 9 70511316 70596168 - MGP_CBAJ_P0092439 Usp3 protein_coding protein_coding MGP_CBAJ_T0092440.1 MGP_CBAJ_G0034631.1 mouse_genomes_project 9 70513902 70596026 - MGP_CBAJ_P0092440 Usp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092441.1 MGP_CBAJ_G0034631.1 mouse_genomes_project 9 70514895 70596062 - MGP_CBAJ_P0092441 Usp3 protein_coding protein_coding MGP_CBAJ_T0092442.1 MGP_CBAJ_G0034631.1 mouse_genomes_project 9 70515545 70595984 - Usp3 protein_coding retained_intron MGP_CBAJ_T0092443.1 MGP_CBAJ_G0034631.1 mouse_genomes_project 9 70515743 70596032 - MGP_CBAJ_P0092443 Usp3 protein_coding protein_coding MGP_CBAJ_T0092444.1 MGP_CBAJ_G0034631.1 mouse_genomes_project 9 70515917 70518008 - Usp3 protein_coding retained_intron MGP_CBAJ_T0092445.1 MGP_CBAJ_G0034631.1 mouse_genomes_project 9 70516076 70518489 - Usp3 protein_coding retained_intron MGP_CBAJ_T0092446.1 MGP_CBAJ_G0034631.1 mouse_genomes_project 9 70524329 70528075 - Usp3 protein_coding retained_intron MGP_CBAJ_T0092447.1 MGP_CBAJ_G0034631.1 mouse_genomes_project 9 70524644 70539098 - Usp3 protein_coding processed_transcript MGP_CBAJ_T0092448.1 MGP_CBAJ_G0034631.1 mouse_genomes_project 9 70544208 70568148 - Usp3 protein_coding retained_intron MGP_CBAJ_T0092449.1 MGP_CBAJ_G0034631.1 mouse_genomes_project 9 70546613 70577260 - Usp3 protein_coding processed_transcript MGP_CBAJ_T0094667.1 MGP_CBAJ_G0035063.1 mouse_genomes_project 9 129918411 129927257 - MGP_CBAJ_P0094667 protein_coding unknown_likely_coding MGP_CBAJ_T0091578.1 MGP_CBAJ_G0034372.1 mouse_genomes_project 9 46167540 46200582 - MGP_CBAJ_P0091578 Arcn1 protein_coding protein_coding MGP_CBAJ_T0091579.1 MGP_CBAJ_G0034372.1 mouse_genomes_project 9 46186966 46200535 - Arcn1 protein_coding retained_intron MGP_CBAJ_T0091580.1 MGP_CBAJ_G0034372.1 mouse_genomes_project 9 46187874 46192766 - Arcn1 protein_coding processed_transcript MGP_CBAJ_T0091060.1 MGP_CBAJ_G0034157.1 mouse_genomes_project 9 26239665 26254646 - Acad8 protein_coding retained_intron MGP_CBAJ_T0091061.1 MGP_CBAJ_G0034157.1 mouse_genomes_project 9 26239665 26269637 - MGP_CBAJ_P0091061 Acad8 protein_coding protein_coding MGP_CBAJ_T0091062.1 MGP_CBAJ_G0034157.1 mouse_genomes_project 9 26239674 26269621 - MGP_CBAJ_P0091062 Acad8 protein_coding protein_coding MGP_CBAJ_T0091063.1 MGP_CBAJ_G0034157.1 mouse_genomes_project 9 26240905 26243488 - Acad8 protein_coding retained_intron MGP_CBAJ_T0091064.1 MGP_CBAJ_G0034157.1 mouse_genomes_project 9 26244731 26269580 - MGP_CBAJ_P0091064 Acad8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091065.1 MGP_CBAJ_G0034157.1 mouse_genomes_project 9 26244792 26269578 - MGP_CBAJ_P0091065 Acad8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091066.1 MGP_CBAJ_G0034157.1 mouse_genomes_project 9 26254615 26269577 - Acad8 protein_coding retained_intron MGP_CBAJ_T0099615.1 MGP_CBAJ_G0037870.1 mouse_genomes_project 9 70348341 70348443 - Gm23428 snRNA snRNA MGP_CBAJ_T0093400.1 MGP_CBAJ_G0034840.1 mouse_genomes_project 9 110842858 110850988 + MGP_CBAJ_P0093400 Anapc13 protein_coding protein_coding MGP_CBAJ_T0093401.1 MGP_CBAJ_G0034840.1 mouse_genomes_project 9 110842886 110850813 + MGP_CBAJ_P0093401 Anapc13 protein_coding protein_coding MGP_CBAJ_T0093402.1 MGP_CBAJ_G0034840.1 mouse_genomes_project 9 110843225 110850805 + MGP_CBAJ_P0093402 Anapc13 protein_coding protein_coding MGP_CBAJ_T0093403.1 MGP_CBAJ_G0034840.1 mouse_genomes_project 9 110843241 110850805 + MGP_CBAJ_P0093403 Anapc13 protein_coding protein_coding MGP_CBAJ_T0093404.1 MGP_CBAJ_G0034840.1 mouse_genomes_project 9 110845074 110846290 + Anapc13 protein_coding retained_intron MGP_CBAJ_T0092250.1 MGP_CBAJ_G0034575.1 mouse_genomes_project 9 65824948 65953020 - MGP_CBAJ_P0092250 Coro2b protein_coding protein_coding MGP_CBAJ_T0092251.1 MGP_CBAJ_G0034575.1 mouse_genomes_project 9 65834262 65836676 - MGP_CBAJ_P0092251 Coro2b protein_coding protein_coding MGP_CBAJ_T0092252.1 MGP_CBAJ_G0034575.1 mouse_genomes_project 9 65836610 65926657 - MGP_CBAJ_P0092252 Coro2b protein_coding protein_coding MGP_CBAJ_T0092253.1 MGP_CBAJ_G0034575.1 mouse_genomes_project 9 65836937 65837929 - Coro2b protein_coding retained_intron MGP_CBAJ_T0092254.1 MGP_CBAJ_G0034575.1 mouse_genomes_project 9 65838012 65856053 - MGP_CBAJ_P0092254 Coro2b protein_coding protein_coding MGP_CBAJ_T0092255.1 MGP_CBAJ_G0034575.1 mouse_genomes_project 9 65841167 65936462 - MGP_CBAJ_P0092255 Coro2b protein_coding protein_coding MGP_CBAJ_T0092256.1 MGP_CBAJ_G0034575.1 mouse_genomes_project 9 65859170 65952936 - Coro2b protein_coding retained_intron MGP_CBAJ_T0100876.1 MGP_CBAJ_G0039131.1 mouse_genomes_project 9 55985263 55985392 + Gm22304 snoRNA snoRNA MGP_CBAJ_T0002397.1 MGP_CBAJ_G0002309.1 mouse_genomes_project 9 109269000 109270354 - TEC TEC MGP_CBAJ_T0009106.1 MGP_CBAJ_G0007306.1 mouse_genomes_project 9 19657369 19660862 - Gm26592 lincRNA lincRNA MGP_CBAJ_T0009116.1 MGP_CBAJ_G0007316.1 mouse_genomes_project 9 32897189 32952293 + lincRNA lincRNA MGP_CBAJ_T0094719.1 MGP_CBAJ_G0035084.1 mouse_genomes_project 9 131032241 131037174 + MGP_CBAJ_P0094719 Rpsa protein_coding protein_coding MGP_CBAJ_T0093732.1 MGP_CBAJ_G0034901.1 mouse_genomes_project 9 116160068 116171240 - MGP_CBAJ_P0093732 Hemk1 protein_coding protein_coding MGP_CBAJ_T0093733.1 MGP_CBAJ_G0034901.1 mouse_genomes_project 9 116160676 116171208 - Hemk1 protein_coding retained_intron MGP_CBAJ_T0093734.1 MGP_CBAJ_G0034901.1 mouse_genomes_project 9 116160694 116169554 - Hemk1 protein_coding processed_transcript MGP_CBAJ_T0093735.1 MGP_CBAJ_G0034901.1 mouse_genomes_project 9 116160696 116162437 - Hemk1 protein_coding retained_intron MGP_CBAJ_T0093736.1 MGP_CBAJ_G0034901.1 mouse_genomes_project 9 116160975 116171223 - MGP_CBAJ_P0093736 Hemk1 protein_coding protein_coding MGP_CBAJ_T0093737.1 MGP_CBAJ_G0034901.1 mouse_genomes_project 9 116162344 116163691 - Hemk1 protein_coding retained_intron MGP_CBAJ_T0093738.1 MGP_CBAJ_G0034901.1 mouse_genomes_project 9 116168035 116171192 - Hemk1 protein_coding retained_intron MGP_CBAJ_T0091468.1 MGP_CBAJ_G0034336.1 mouse_genomes_project 9 44265398 44273159 - MGP_CBAJ_P0091468 Tmem136 protein_coding protein_coding MGP_CBAJ_T0094147.1 MGP_CBAJ_G0034960.1 mouse_genomes_project 9 117595079 117630320 - MGP_CBAJ_P0094147 Arih2 protein_coding unknown_likely_coding MGP_CBAJ_T0094148.1 MGP_CBAJ_G0034960.1 mouse_genomes_project 9 117595082 117654773 - MGP_CBAJ_P0094148 Arih2 protein_coding protein_coding MGP_CBAJ_T0094149.1 MGP_CBAJ_G0034960.1 mouse_genomes_project 9 117595087 117598744 - Arih2 protein_coding retained_intron MGP_CBAJ_T0094150.1 MGP_CBAJ_G0034960.1 mouse_genomes_project 9 117596843 117654778 - MGP_CBAJ_P0094150 Arih2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094151.1 MGP_CBAJ_G0034960.1 mouse_genomes_project 9 117596965 117600808 - MGP_CBAJ_P0094151 Arih2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094152.1 MGP_CBAJ_G0034960.1 mouse_genomes_project 9 117597099 117599483 - Arih2 protein_coding retained_intron MGP_CBAJ_T0094153.1 MGP_CBAJ_G0034960.1 mouse_genomes_project 9 117597430 117600089 - Arih2 protein_coding retained_intron MGP_CBAJ_T0094154.1 MGP_CBAJ_G0034960.1 mouse_genomes_project 9 117602015 117654779 - MGP_CBAJ_P0094154 Arih2 protein_coding protein_coding MGP_CBAJ_T0094155.1 MGP_CBAJ_G0034960.1 mouse_genomes_project 9 117602099 117646287 - MGP_CBAJ_P0094155 Arih2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094156.1 MGP_CBAJ_G0034960.1 mouse_genomes_project 9 117607555 117629656 - Arih2 protein_coding retained_intron MGP_CBAJ_T0094157.1 MGP_CBAJ_G0034960.1 mouse_genomes_project 9 117608555 117654711 - Arih2 protein_coding retained_intron MGP_CBAJ_T0094158.1 MGP_CBAJ_G0034960.1 mouse_genomes_project 9 117609572 117654735 - MGP_CBAJ_P0094158 Arih2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094159.1 MGP_CBAJ_G0034960.1 mouse_genomes_project 9 117646900 117654762 - Arih2 protein_coding retained_intron MGP_CBAJ_T0093577.1 MGP_CBAJ_G0034870.1 mouse_genomes_project 9 114455310 114570561 - MGP_CBAJ_P0093577 Col6a5 protein_coding protein_coding MGP_CBAJ_T0093578.1 MGP_CBAJ_G0034870.1 mouse_genomes_project 9 114456543 114559071 - MGP_CBAJ_P0093578 Col6a5 protein_coding unknown_likely_coding MGP_CBAJ_T0093579.1 MGP_CBAJ_G0034870.1 mouse_genomes_project 9 114457954 114570561 - MGP_CBAJ_P0093579 Col6a5 protein_coding protein_coding MGP_CBAJ_T0093580.1 MGP_CBAJ_G0034870.1 mouse_genomes_project 9 114474948 114481079 - Col6a5 protein_coding retained_intron MGP_CBAJ_T0092059.1 MGP_CBAJ_G0034528.1 mouse_genomes_project 9 60466318 60494042 - MGP_CBAJ_P0092059 Csk protein_coding protein_coding MGP_CBAJ_T0091534.1 MGP_CBAJ_G0034357.1 mouse_genomes_project 9 45693962 45696103 + MGP_CBAJ_P0091534 H2afx protein_coding protein_coding MGP_CBAJ_T0092905.1 MGP_CBAJ_G0034736.1 mouse_genomes_project 9 87730465 87907062 + MGP_CBAJ_P0092905 Mei4 protein_coding protein_coding MGP_CBAJ_T0092906.1 MGP_CBAJ_G0034736.1 mouse_genomes_project 9 87730500 88124693 + MGP_CBAJ_P0092906 Mei4 protein_coding protein_coding MGP_CBAJ_T0092907.1 MGP_CBAJ_G0034736.1 mouse_genomes_project 9 87730504 87906495 + MGP_CBAJ_P0092907 Mei4 protein_coding protein_coding MGP_CBAJ_T0015914.1 MGP_CBAJ_G0014026.1 mouse_genomes_project 9 114077487 114077890 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0092335.1 MGP_CBAJ_G0034597.1 mouse_genomes_project 9 68440698 68464808 - MGP_CBAJ_P0092335 Rab11a protein_coding protein_coding MGP_CBAJ_T0092336.1 MGP_CBAJ_G0034597.1 mouse_genomes_project 9 68440800 68449912 - Rab11a protein_coding retained_intron MGP_CBAJ_T0092337.1 MGP_CBAJ_G0034597.1 mouse_genomes_project 9 68440901 68450902 - MGP_CBAJ_P0092337 Rab11a protein_coding protein_coding MGP_CBAJ_T0092338.1 MGP_CBAJ_G0034597.1 mouse_genomes_project 9 68440965 68450645 - Rab11a protein_coding processed_transcript MGP_CBAJ_T0092339.1 MGP_CBAJ_G0034597.1 mouse_genomes_project 9 68441044 68464689 - MGP_CBAJ_P0092339 Rab11a protein_coding protein_coding MGP_CBAJ_T0092340.1 MGP_CBAJ_G0034597.1 mouse_genomes_project 9 68441138 68464689 - MGP_CBAJ_P0092340 Rab11a protein_coding protein_coding MGP_CBAJ_T0092341.1 MGP_CBAJ_G0034597.1 mouse_genomes_project 9 68441148 68464818 - MGP_CBAJ_P0092341 Rab11a protein_coding protein_coding MGP_CBAJ_T0092342.1 MGP_CBAJ_G0034597.1 mouse_genomes_project 9 68450882 68463577 - Rab11a protein_coding processed_transcript MGP_CBAJ_T0091051.1 MGP_CBAJ_G0034154.1 mouse_genomes_project 9 26017919 26062518 - MGP_CBAJ_P0091051 Glb1l2 protein_coding protein_coding MGP_CBAJ_T0091052.1 MGP_CBAJ_G0034154.1 mouse_genomes_project 9 26017920 26062554 - MGP_CBAJ_P0091052 Glb1l2 protein_coding protein_coding MGP_CBAJ_T0091053.1 MGP_CBAJ_G0034154.1 mouse_genomes_project 9 26018643 26062507 - MGP_CBAJ_P0091053 Glb1l2 protein_coding protein_coding MGP_CBAJ_T0091054.1 MGP_CBAJ_G0034154.1 mouse_genomes_project 9 26020078 26058670 - MGP_CBAJ_P0091054 Glb1l2 protein_coding protein_coding MGP_CBAJ_T0091055.1 MGP_CBAJ_G0034154.1 mouse_genomes_project 9 26022372 26023346 - Glb1l2 protein_coding retained_intron MGP_CBAJ_T0091056.1 MGP_CBAJ_G0034154.1 mouse_genomes_project 9 26028886 26048320 - Glb1l2 protein_coding retained_intron MGP_CBAJ_T0091057.1 MGP_CBAJ_G0034154.1 mouse_genomes_project 9 26035551 26062508 - MGP_CBAJ_P0091057 Glb1l2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090800.1 MGP_CBAJ_G0034050.1 mouse_genomes_project 9 17855530 17856469 + MGP_CBAJ_P0090800 Olfr849 protein_coding protein_coding MGP_CBAJ_T0091640.1 MGP_CBAJ_G0034392.1 mouse_genomes_project 9 46876561 46902506 + MGP_CBAJ_P0091640 Fxyd6 protein_coding protein_coding MGP_CBAJ_T0091399.1 MGP_CBAJ_G0034312.1 mouse_genomes_project 9 40754115 40754791 - MGP_CBAJ_P0091399 protein_coding protein_coding MGP_CBAJ_T0091275.1 MGP_CBAJ_G0034219.1 mouse_genomes_project 9 37772407 37784505 + Robo4 protein_coding retained_intron MGP_CBAJ_T0091276.1 MGP_CBAJ_G0034219.1 mouse_genomes_project 9 37772407 37784509 + MGP_CBAJ_P0091276 Robo4 protein_coding protein_coding MGP_CBAJ_T0091277.1 MGP_CBAJ_G0034219.1 mouse_genomes_project 9 37772543 37784507 + MGP_CBAJ_P0091277 Robo4 protein_coding protein_coding MGP_CBAJ_T0091278.1 MGP_CBAJ_G0034219.1 mouse_genomes_project 9 37772556 37784508 + MGP_CBAJ_P0091278 Robo4 protein_coding protein_coding MGP_CBAJ_T0098125.1 MGP_CBAJ_G0036398.1 mouse_genomes_project 9 111270357 111270461 - n-R5s89 rRNA rRNA MGP_CBAJ_T0091533.1 MGP_CBAJ_G0034356.1 mouse_genomes_project 9 45682920 45692869 + MGP_CBAJ_P0091533 Dpagt1 protein_coding protein_coding MGP_CBAJ_T0092461.1 MGP_CBAJ_G0034637.1 mouse_genomes_project 9 71001231 71018616 + MGP_CBAJ_P0092461 Rps27l protein_coding protein_coding MGP_CBAJ_T0092462.1 MGP_CBAJ_G0034637.1 mouse_genomes_project 9 71001236 71018618 + MGP_CBAJ_P0092462 Rps27l protein_coding protein_coding MGP_CBAJ_T0092463.1 MGP_CBAJ_G0034637.1 mouse_genomes_project 9 71001311 71018572 + MGP_CBAJ_P0092463 Rps27l protein_coding nonsense_mediated_decay MGP_CBAJ_T0092464.1 MGP_CBAJ_G0034637.1 mouse_genomes_project 9 71001500 71018620 + Rps27l protein_coding processed_transcript MGP_CBAJ_T0092465.1 MGP_CBAJ_G0034637.1 mouse_genomes_project 9 71002787 71018572 + MGP_CBAJ_P0092465 Rps27l protein_coding protein_coding MGP_CBAJ_T0092466.1 MGP_CBAJ_G0034637.1 mouse_genomes_project 9 71017666 71018615 + Rps27l protein_coding retained_intron MGP_CBAJ_T0094708.1 MGP_CBAJ_G0035080.1 mouse_genomes_project 9 130900380 130910215 - MGP_CBAJ_P0094708 Xirp1 protein_coding protein_coding MGP_CBAJ_T0099612.1 MGP_CBAJ_G0037867.1 mouse_genomes_project 9 69001440 69001556 - Gm25313 snRNA snRNA MGP_CBAJ_T0091339.1 MGP_CBAJ_G0034264.1 mouse_genomes_project 9 39223957 39224890 - MGP_CBAJ_P0091339 Olfr916 protein_coding protein_coding MGP_CBAJ_T0009218.1 MGP_CBAJ_G0007398.1 mouse_genomes_project 9 112250959 112300307 - Gm29154 lincRNA lincRNA MGP_CBAJ_T0009219.1 MGP_CBAJ_G0007398.1 mouse_genomes_project 9 112251062 112299605 - Gm29154 lincRNA lincRNA MGP_CBAJ_T0011615.1 MGP_CBAJ_G0009753.1 mouse_genomes_project 9 95072883 95073173 + Gm26461 misc_RNA misc_RNA MGP_CBAJ_T0099614.1 MGP_CBAJ_G0037869.1 mouse_genomes_project 9 69830848 69830956 + Gm23248 snRNA snRNA MGP_CBAJ_T0015908.1 MGP_CBAJ_G0014020.1 mouse_genomes_project 9 110755153 110756654 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0093590.1 MGP_CBAJ_G0034874.1 mouse_genomes_project 9 114840837 114846005 - MGP_CBAJ_P0093590 Ppm1m protein_coding protein_coding MGP_CBAJ_T0093591.1 MGP_CBAJ_G0034874.1 mouse_genomes_project 9 114840837 114845621 - MGP_CBAJ_P0093591 Ppm1m protein_coding protein_coding MGP_CBAJ_T0093592.1 MGP_CBAJ_G0034874.1 mouse_genomes_project 9 114841612 114843563 - MGP_CBAJ_P0093592 Ppm1m protein_coding protein_coding MGP_CBAJ_T0093593.1 MGP_CBAJ_G0034874.1 mouse_genomes_project 9 114844209 114845013 - Ppm1m protein_coding retained_intron MGP_CBAJ_T0093594.1 MGP_CBAJ_G0034874.1 mouse_genomes_project 9 114844619 114846472 - Ppm1m protein_coding processed_transcript MGP_CBAJ_T0015897.1 MGP_CBAJ_G0014009.1 mouse_genomes_project 9 104821002 104821288 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015841.1 MGP_CBAJ_G0013953.1 mouse_genomes_project 9 80083436 80084659 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098113.1 MGP_CBAJ_G0036386.1 mouse_genomes_project 9 35579744 35579852 - Gm24188 rRNA rRNA MGP_CBAJ_T0093444.1 MGP_CBAJ_G0034849.1 mouse_genomes_project 9 111539434 111579082 - MGP_CBAJ_P0093444 1300017J02Rik protein_coding protein_coding MGP_CBAJ_T0093445.1 MGP_CBAJ_G0034849.1 mouse_genomes_project 9 111539435 111547255 - 1300017J02Rik protein_coding retained_intron MGP_CBAJ_T0093446.1 MGP_CBAJ_G0034849.1 mouse_genomes_project 9 111539537 111579009 - MGP_CBAJ_P0093446 1300017J02Rik protein_coding protein_coding MGP_CBAJ_T0093447.1 MGP_CBAJ_G0034849.1 mouse_genomes_project 9 111540750 111556704 - MGP_CBAJ_P0093447 1300017J02Rik protein_coding protein_coding MGP_CBAJ_T0093448.1 MGP_CBAJ_G0034849.1 mouse_genomes_project 9 111561271 111579082 - 1300017J02Rik protein_coding processed_transcript MGP_CBAJ_T0093449.1 MGP_CBAJ_G0034849.1 mouse_genomes_project 9 111573559 111592041 - MGP_CBAJ_P0093449 1300017J02Rik protein_coding protein_coding MGP_CBAJ_T0094882.1 MGP_CBAJ_G0035137.1 mouse_genomes_project 9 135177860 135188430 - MGP_CBAJ_P0094882 Xcr1 protein_coding protein_coding MGP_CBAJ_T0015894.1 MGP_CBAJ_G0014006.1 mouse_genomes_project 9 104343740 104344008 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0091800.1 MGP_CBAJ_G0034442.1 mouse_genomes_project 9 52830510 52837352 - MGP_CBAJ_P0091800 2310030G06Rik protein_coding protein_coding MGP_CBAJ_T0100862.1 MGP_CBAJ_G0039117.1 mouse_genomes_project 9 24757444 24757572 - Gm25346 snoRNA snoRNA MGP_CBAJ_T0011618.1 MGP_CBAJ_G0009756.1 mouse_genomes_project 9 111250929 111251251 + Gm25842 misc_RNA misc_RNA MGP_CBAJ_T0091162.1 MGP_CBAJ_G0034186.1 mouse_genomes_project 9 35266937 35280043 + Srpr protein_coding processed_transcript MGP_CBAJ_T0091175.1 MGP_CBAJ_G0034186.1 mouse_genomes_project 9 35277657 35286226 + MGP_CBAJ_P0091175 Srpr protein_coding protein_coding MGP_CBAJ_T0091176.1 MGP_CBAJ_G0034186.1 mouse_genomes_project 9 35278400 35279358 + Srpr protein_coding retained_intron MGP_CBAJ_T0091177.1 MGP_CBAJ_G0034186.1 mouse_genomes_project 9 35281405 35316754 + MGP_CBAJ_P0091177 Srpr protein_coding protein_coding MGP_CBAJ_T0010945.1 MGP_CBAJ_G0009083.1 mouse_genomes_project 9 65621107 65621212 - Gm25603 miRNA miRNA MGP_CBAJ_T0010957.1 MGP_CBAJ_G0009095.1 mouse_genomes_project 9 96484154 96484223 - Mir184 miRNA miRNA MGP_CBAJ_T0002361.1 MGP_CBAJ_G0002273.1 mouse_genomes_project 9 93058429 93059588 - TEC TEC MGP_CBAJ_T0018251.1 MGP_CBAJ_G0015475.1 mouse_genomes_project 9 41651834 41655189 - Gm16096 processed_transcript processed_transcript MGP_CBAJ_T0018252.1 MGP_CBAJ_G0015475.1 mouse_genomes_project 9 41651840 41654479 - Gm16096 processed_transcript processed_transcript MGP_CBAJ_T0009179.1 MGP_CBAJ_G0007368.1 mouse_genomes_project 9 89256661 89272976 - Gm27216 lincRNA lincRNA MGP_CBAJ_T0009180.1 MGP_CBAJ_G0007368.1 mouse_genomes_project 9 89256671 89273530 - Gm27216 lincRNA lincRNA MGP_CBAJ_T0009181.1 MGP_CBAJ_G0007368.1 mouse_genomes_project 9 89256688 89273477 - Gm27216 lincRNA lincRNA MGP_CBAJ_T0018249.1 MGP_CBAJ_G0015474.1 mouse_genomes_project 9 41129110 41149222 + 1700110K17Rik processed_transcript processed_transcript MGP_CBAJ_T0018250.1 MGP_CBAJ_G0015474.1 mouse_genomes_project 9 41139144 41149216 + 1700110K17Rik processed_transcript processed_transcript MGP_CBAJ_T0094644.1 MGP_CBAJ_G0035059.1 mouse_genomes_project 9 129665452 129801483 + MGP_CBAJ_P0094644 Ctdspl protein_coding protein_coding MGP_CBAJ_T0094645.1 MGP_CBAJ_G0035059.1 mouse_genomes_project 9 129668772 129798134 + MGP_CBAJ_P0094645 Ctdspl protein_coding protein_coding MGP_CBAJ_T0094646.1 MGP_CBAJ_G0035059.1 mouse_genomes_project 9 129671775 129791088 + Ctdspl protein_coding processed_transcript MGP_CBAJ_T0094647.1 MGP_CBAJ_G0035059.1 mouse_genomes_project 9 129790460 129798394 + Ctdspl protein_coding retained_intron MGP_CBAJ_T0092468.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71098537 71125324 - MGP_CBAJ_P0092468 Tpm1 protein_coding protein_coding MGP_CBAJ_T0092469.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71098537 71125185 - MGP_CBAJ_P0092469 Tpm1 protein_coding protein_coding MGP_CBAJ_T0092470.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71098537 71119825 - MGP_CBAJ_P0092470 Tpm1 protein_coding protein_coding MGP_CBAJ_T0092471.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71098539 71119720 - MGP_CBAJ_P0092471 Tpm1 protein_coding protein_coding MGP_CBAJ_T0092472.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71098540 71119880 - MGP_CBAJ_P0092472 Tpm1 protein_coding protein_coding MGP_CBAJ_T0092473.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71098540 71125127 - MGP_CBAJ_P0092473 Tpm1 protein_coding protein_coding MGP_CBAJ_T0092474.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71098553 71125104 - MGP_CBAJ_P0092474 Tpm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092475.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71098553 71125119 - MGP_CBAJ_P0092475 Tpm1 protein_coding protein_coding MGP_CBAJ_T0092476.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71098562 71125193 - MGP_CBAJ_P0092476 Tpm1 protein_coding protein_coding MGP_CBAJ_T0092477.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71098569 71119696 - MGP_CBAJ_P0092477 Tpm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092478.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71100271 71125090 - MGP_CBAJ_P0092478 Tpm1 protein_coding protein_coding MGP_CBAJ_T0092479.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71100273 71119627 - MGP_CBAJ_P0092479 Tpm1 protein_coding protein_coding MGP_CBAJ_T0092480.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71103830 71125182 - MGP_CBAJ_P0092480 Tpm1 protein_coding protein_coding MGP_CBAJ_T0092481.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71103830 71125131 - MGP_CBAJ_P0092481 Tpm1 protein_coding protein_coding MGP_CBAJ_T0092482.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71103904 71119759 - MGP_CBAJ_P0092482 Tpm1 protein_coding protein_coding MGP_CBAJ_T0092483.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71103927 71125061 - MGP_CBAJ_P0092483 Tpm1 protein_coding protein_coding MGP_CBAJ_T0092484.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71103986 71119651 - MGP_CBAJ_P0092484 Tpm1 protein_coding protein_coding MGP_CBAJ_T0092485.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71104786 71125180 - MGP_CBAJ_P0092485 Tpm1 protein_coding protein_coding MGP_CBAJ_T0092486.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71105858 71108764 - Tpm1 protein_coding processed_transcript MGP_CBAJ_T0092487.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71108158 71125036 - Tpm1 protein_coding retained_intron MGP_CBAJ_T0092488.1 MGP_CBAJ_G0034639.1 mouse_genomes_project 9 71109716 71125109 - Tpm1 protein_coding processed_transcript MGP_CBAJ_T0091531.1 MGP_CBAJ_G0034354.1 mouse_genomes_project 9 45647556 45661179 - MGP_CBAJ_P0091531 Hinfp protein_coding protein_coding MGP_CBAJ_T0092779.1 MGP_CBAJ_G0034704.1 mouse_genomes_project 9 82167470 82269318 - MGP_CBAJ_P0092779 Tinag protein_coding nonsense_mediated_decay MGP_CBAJ_T0092780.1 MGP_CBAJ_G0034704.1 mouse_genomes_project 9 82167470 82269363 - MGP_CBAJ_P0092780 Tinag protein_coding protein_coding MGP_CBAJ_T0093375.1 MGP_CBAJ_G0034833.1 mouse_genomes_project 9 109157916 109183503 + MGP_CBAJ_P0093375 Msl2 protein_coding protein_coding MGP_CBAJ_T0093376.1 MGP_CBAJ_G0034833.1 mouse_genomes_project 9 109158579 109186522 + MGP_CBAJ_P0093376 Msl2 protein_coding protein_coding MGP_CBAJ_T0093753.1 MGP_CBAJ_G0034905.1 mouse_genomes_project 9 116379064 116381923 - MGP_CBAJ_P0093753 Cyb561d2 protein_coding protein_coding MGP_CBAJ_T0093754.1 MGP_CBAJ_G0034905.1 mouse_genomes_project 9 116379632 116382251 - MGP_CBAJ_P0093754 Cyb561d2 protein_coding protein_coding MGP_CBAJ_T0093755.1 MGP_CBAJ_G0034905.1 mouse_genomes_project 9 116379638 116381583 - MGP_CBAJ_P0093755 Cyb561d2 protein_coding protein_coding MGP_CBAJ_T0093756.1 MGP_CBAJ_G0034905.1 mouse_genomes_project 9 116379934 116382182 - Cyb561d2 protein_coding processed_transcript MGP_CBAJ_T0093757.1 MGP_CBAJ_G0034905.1 mouse_genomes_project 9 116380099 116382185 - MGP_CBAJ_P0093757 Cyb561d2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090986.1 MGP_CBAJ_G0034127.1 mouse_genomes_project 9 20826998 20838183 + MGP_CBAJ_P0090986 Prkcsh protein_coding protein_coding MGP_CBAJ_T0090987.1 MGP_CBAJ_G0034127.1 mouse_genomes_project 9 20826998 20838183 + MGP_CBAJ_P0090987 Prkcsh protein_coding protein_coding MGP_CBAJ_T0005431.1 MGP_CBAJ_G0004578.1 mouse_genomes_project 9 106288598 106289854 + Gm37637 antisense antisense MGP_CBAJ_T0091909.1 MGP_CBAJ_G0034478.1 mouse_genomes_project 9 56977573 56983603 + MGP_CBAJ_P0091909 Sh2d7 protein_coding protein_coding MGP_CBAJ_T0091910.1 MGP_CBAJ_G0034478.1 mouse_genomes_project 9 56977577 56982237 + MGP_CBAJ_P0091910 Sh2d7 protein_coding protein_coding MGP_CBAJ_T0011611.1 MGP_CBAJ_G0009749.1 mouse_genomes_project 9 65386432 65386525 + Gm23221 misc_RNA misc_RNA MGP_CBAJ_T0010977.1 MGP_CBAJ_G0009115.1 mouse_genomes_project 9 121856133 121856209 - Mir128-2 miRNA miRNA MGP_CBAJ_T0091738.1 MGP_CBAJ_G0034421.1 mouse_genomes_project 9 50834271 50865892 - MGP_CBAJ_P0091738 Htr3b protein_coding protein_coding MGP_CBAJ_T0091185.1 MGP_CBAJ_G0034189.1 mouse_genomes_project 9 35339158 35347213 + MGP_CBAJ_P0091185 Rpusd4 protein_coding protein_coding MGP_CBAJ_T0091186.1 MGP_CBAJ_G0034189.1 mouse_genomes_project 9 35343585 35346458 + Rpusd4 protein_coding retained_intron MGP_CBAJ_T0091187.1 MGP_CBAJ_G0034189.1 mouse_genomes_project 9 35343941 35345056 + Rpusd4 protein_coding retained_intron MGP_CBAJ_T0091188.1 MGP_CBAJ_G0034189.1 mouse_genomes_project 9 35346444 35348958 + MGP_CBAJ_P0091188 Rpusd4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093326.1 MGP_CBAJ_G0034824.1 mouse_genomes_project 9 107434820 107450024 + MGP_CBAJ_P0093326 A4gnt protein_coding protein_coding MGP_CBAJ_T0091912.1 MGP_CBAJ_G0034480.1 mouse_genomes_project 9 57031991 57054402 + MGP_CBAJ_P0091912 Idh3a protein_coding protein_coding MGP_CBAJ_T0094490.1 MGP_CBAJ_G0035020.1 mouse_genomes_project 9 120666165 120668948 - MGP_CBAJ_P0094490 Ccrl2 protein_coding protein_coding MGP_CBAJ_T0094491.1 MGP_CBAJ_G0035020.1 mouse_genomes_project 9 120666510 120669197 - MGP_CBAJ_P0094491 Ccrl2 protein_coding protein_coding MGP_CBAJ_T0094492.1 MGP_CBAJ_G0035020.1 mouse_genomes_project 9 120667707 120668924 - MGP_CBAJ_P0094492 Ccrl2 protein_coding protein_coding MGP_CBAJ_T0015915.1 MGP_CBAJ_G0014027.1 mouse_genomes_project 9 114748738 114749336 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100919.1 MGP_CBAJ_G0039174.1 mouse_genomes_project 9 131034887 131035036 + Snora62 snoRNA snoRNA MGP_CBAJ_T0002362.1 MGP_CBAJ_G0002274.1 mouse_genomes_project 9 93086372 93088895 + TEC TEC MGP_CBAJ_T0094595.1 MGP_CBAJ_G0035047.1 mouse_genomes_project 9 125105078 125142433 - MGP_CBAJ_P0094595 Gpd1l protein_coding protein_coding MGP_CBAJ_T0094596.1 MGP_CBAJ_G0035047.1 mouse_genomes_project 9 125109079 125142595 - MGP_CBAJ_P0094596 Gpd1l protein_coding protein_coding MGP_CBAJ_T0094597.1 MGP_CBAJ_G0035047.1 mouse_genomes_project 9 125116707 125125124 - Gpd1l protein_coding processed_transcript MGP_CBAJ_T0091108.1 MGP_CBAJ_G0034172.1 mouse_genomes_project 9 30782566 30848805 - MGP_CBAJ_P0091108 Aplp2 protein_coding protein_coding MGP_CBAJ_T0091109.1 MGP_CBAJ_G0034172.1 mouse_genomes_project 9 30782566 30848805 - MGP_CBAJ_P0091109 Aplp2 protein_coding protein_coding MGP_CBAJ_T0015820.1 MGP_CBAJ_G0013932.1 mouse_genomes_project 9 62994871 62995148 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015925.1 MGP_CBAJ_G0014037.1 mouse_genomes_project 9 120689710 120690066 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018268.1 MGP_CBAJ_G0015478.1 mouse_genomes_project 9 59825564 59840813 - Gm10658 processed_transcript processed_transcript MGP_CBAJ_T0018269.1 MGP_CBAJ_G0015478.1 mouse_genomes_project 9 59826137 59840972 - Gm10658 processed_transcript processed_transcript MGP_CBAJ_T0098115.1 MGP_CBAJ_G0036388.1 mouse_genomes_project 9 63229258 63229363 - Gm23668 rRNA rRNA MGP_CBAJ_T0002342.1 MGP_CBAJ_G0002255.1 mouse_genomes_project 9 77609524 77611420 + TEC TEC MGP_CBAJ_T0002402.1 MGP_CBAJ_G0002314.1 mouse_genomes_project 9 110365912 110370279 + TEC TEC MGP_CBAJ_T0009127.1 MGP_CBAJ_G0007325.1 mouse_genomes_project 9 42120566 42142316 + lincRNA lincRNA MGP_CBAJ_T0091315.1 MGP_CBAJ_G0034240.1 mouse_genomes_project 9 38600803 38601748 + MGP_CBAJ_P0091315 Olfr888 protein_coding protein_coding MGP_CBAJ_T0091748.1 MGP_CBAJ_G0034426.1 mouse_genomes_project 9 51304118 51384385 + MGP_CBAJ_P0091748 Drd2 protein_coding protein_coding MGP_CBAJ_T0005429.1 MGP_CBAJ_G0004577.1 mouse_genomes_project 9 105654302 105663054 + 4921534H16Rik antisense antisense MGP_CBAJ_T0005430.1 MGP_CBAJ_G0004577.1 mouse_genomes_project 9 105654302 105656652 + 4921534H16Rik antisense antisense MGP_CBAJ_T0094526.1 MGP_CBAJ_G0035026.1 mouse_genomes_project 9 121241118 121382530 - MGP_CBAJ_P0094526 Stac protein_coding protein_coding MGP_CBAJ_T0094527.1 MGP_CBAJ_G0035026.1 mouse_genomes_project 9 121241118 121382407 - MGP_CBAJ_P0094527 Stac protein_coding nonsense_mediated_decay MGP_CBAJ_T0094528.1 MGP_CBAJ_G0035026.1 mouse_genomes_project 9 121324935 121382511 - Stac protein_coding processed_transcript MGP_CBAJ_T0091996.1 MGP_CBAJ_G0034504.1 mouse_genomes_project 9 59090366 59175368 + MGP_CBAJ_P0091996 Hmg20a protein_coding protein_coding MGP_CBAJ_T0091870.1 MGP_CBAJ_G0034465.1 mouse_genomes_project 9 55769083 55873985 - MGP_CBAJ_P0091870 Atm protein_coding protein_coding MGP_CBAJ_T0091871.1 MGP_CBAJ_G0034465.1 mouse_genomes_project 9 55769680 55873957 - MGP_CBAJ_P0091871 Atm protein_coding unknown_likely_coding MGP_CBAJ_T0091872.1 MGP_CBAJ_G0034465.1 mouse_genomes_project 9 55770039 55772495 - Atm protein_coding retained_intron MGP_CBAJ_T0091873.1 MGP_CBAJ_G0034465.1 mouse_genomes_project 9 55775309 55783555 - MGP_CBAJ_P0091873 Atm protein_coding protein_coding MGP_CBAJ_T0091874.1 MGP_CBAJ_G0034465.1 mouse_genomes_project 9 55859084 55873918 - Atm protein_coding retained_intron MGP_CBAJ_T0091875.1 MGP_CBAJ_G0034465.1 mouse_genomes_project 9 55864432 55873853 - MGP_CBAJ_P0091875 Atm protein_coding protein_coding MGP_CBAJ_T0094592.1 MGP_CBAJ_G0035045.1 mouse_genomes_project 9 124945507 124970623 - MGP_CBAJ_P0094592 Cmtm7 protein_coding protein_coding MGP_CBAJ_T0094593.1 MGP_CBAJ_G0035045.1 mouse_genomes_project 9 124945507 124970623 - MGP_CBAJ_P0094593 Cmtm7 protein_coding protein_coding MGP_CBAJ_T0091476.1 MGP_CBAJ_G0034342.1 mouse_genomes_project 9 45080535 45083090 + MGP_CBAJ_P0091476 Gm3898 protein_coding protein_coding MGP_CBAJ_T0002349.1 MGP_CBAJ_G0002262.1 mouse_genomes_project 9 80695506 80696194 + TEC TEC MGP_CBAJ_T0091371.1 MGP_CBAJ_G0034290.1 mouse_genomes_project 9 40147303 40147976 + MGP_CBAJ_P0091371 protein_coding protein_coding MGP_CBAJ_T0090578.1 MGP_CBAJ_G0033966.1 mouse_genomes_project 9 1183806 1623210 - MGP_CBAJ_P0090578 Gria4 protein_coding protein_coding MGP_CBAJ_T0090579.1 MGP_CBAJ_G0033966.1 mouse_genomes_project 9 1183806 1623210 - MGP_CBAJ_P0090579 Gria4 protein_coding protein_coding MGP_CBAJ_T0090580.1 MGP_CBAJ_G0033966.1 mouse_genomes_project 9 1253969 1623210 - MGP_CBAJ_P0090580 Gria4 protein_coding protein_coding MGP_CBAJ_T0091802.1 MGP_CBAJ_G0034444.1 mouse_genomes_project 9 52843617 52847513 + MGP_CBAJ_P0091802 Cryab protein_coding protein_coding MGP_CBAJ_T0090803.1 MGP_CBAJ_G0034053.1 mouse_genomes_project 9 17961037 17961955 - MGP_CBAJ_P0090803 Olfr853 protein_coding protein_coding MGP_CBAJ_T0094692.1 MGP_CBAJ_G0035072.1 mouse_genomes_project 9 130265682 130295344 + MGP_CBAJ_P0094692 Exog protein_coding protein_coding MGP_CBAJ_T0094693.1 MGP_CBAJ_G0035072.1 mouse_genomes_project 9 130265710 130294057 + MGP_CBAJ_P0094693 Exog protein_coding protein_coding MGP_CBAJ_T0091532.1 MGP_CBAJ_G0034355.1 mouse_genomes_project 9 45665853 45676835 - MGP_CBAJ_P0091532 C2cd2l protein_coding protein_coding MGP_CBAJ_T0099587.1 MGP_CBAJ_G0037842.1 mouse_genomes_project 9 11086264 11086371 + Gm26189 snRNA snRNA MGP_CBAJ_T0100905.1 MGP_CBAJ_G0039160.1 mouse_genomes_project 9 109498179 109498311 - Gm24638 snoRNA snoRNA MGP_CBAJ_T0090661.1 MGP_CBAJ_G0033995.1 mouse_genomes_project 9 7083052 8493626 - MGP_CBAJ_P0090661 Cntn5 protein_coding protein_coding MGP_CBAJ_T0090662.1 MGP_CBAJ_G0033995.1 mouse_genomes_project 9 7083130 8493675 - MGP_CBAJ_P0090662 Cntn5 protein_coding protein_coding MGP_CBAJ_T0090663.1 MGP_CBAJ_G0033995.1 mouse_genomes_project 9 7083524 7943815 - MGP_CBAJ_P0090663 Cntn5 protein_coding protein_coding MGP_CBAJ_T0090664.1 MGP_CBAJ_G0033995.1 mouse_genomes_project 9 7083524 7943815 - MGP_CBAJ_P0090664 Cntn5 protein_coding protein_coding MGP_CBAJ_T0090665.1 MGP_CBAJ_G0033995.1 mouse_genomes_project 9 8199839 8493349 - Cntn5 protein_coding retained_intron MGP_CBAJ_T0091521.1 MGP_CBAJ_G0034353.1 mouse_genomes_project 9 45616718 45622145 - Abcg4 protein_coding retained_intron MGP_CBAJ_T0091522.1 MGP_CBAJ_G0034353.1 mouse_genomes_project 9 45616718 45639428 - MGP_CBAJ_P0091522 Abcg4 protein_coding protein_coding MGP_CBAJ_T0091523.1 MGP_CBAJ_G0034353.1 mouse_genomes_project 9 45616720 45640499 - MGP_CBAJ_P0091523 Abcg4 protein_coding protein_coding MGP_CBAJ_T0091524.1 MGP_CBAJ_G0034353.1 mouse_genomes_project 9 45617982 45623369 - Abcg4 protein_coding retained_intron MGP_CBAJ_T0091525.1 MGP_CBAJ_G0034353.1 mouse_genomes_project 9 45618625 45623131 - MGP_CBAJ_P0091525 Abcg4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091526.1 MGP_CBAJ_G0034353.1 mouse_genomes_project 9 45620601 45639420 - Abcg4 protein_coding processed_transcript MGP_CBAJ_T0091527.1 MGP_CBAJ_G0034353.1 mouse_genomes_project 9 45621033 45623322 - Abcg4 protein_coding retained_intron MGP_CBAJ_T0091528.1 MGP_CBAJ_G0034353.1 mouse_genomes_project 9 45624178 45625189 - Abcg4 protein_coding retained_intron MGP_CBAJ_T0091529.1 MGP_CBAJ_G0034353.1 mouse_genomes_project 9 45625376 45640241 - MGP_CBAJ_P0091529 Abcg4 protein_coding protein_coding MGP_CBAJ_T0091530.1 MGP_CBAJ_G0034353.1 mouse_genomes_project 9 45625439 45640022 - MGP_CBAJ_P0091530 Abcg4 protein_coding protein_coding MGP_CBAJ_T0093614.1 MGP_CBAJ_G0034879.1 mouse_genomes_project 9 115058691 115068043 + MGP_CBAJ_P0093614 Dusp7 protein_coding protein_coding MGP_CBAJ_T0093615.1 MGP_CBAJ_G0034879.1 mouse_genomes_project 9 115059671 115060935 + Dusp7 protein_coding processed_transcript MGP_CBAJ_T0093616.1 MGP_CBAJ_G0034879.1 mouse_genomes_project 9 115060803 115065950 + MGP_CBAJ_P0093616 Dusp7 protein_coding protein_coding MGP_CBAJ_T0093617.1 MGP_CBAJ_G0034879.1 mouse_genomes_project 9 115066712 115068043 + Dusp7 protein_coding processed_transcript MGP_CBAJ_T0090570.1 MGP_CBAJ_G0033960.1 mouse_genomes_project 9 11309 80647 + MGP_CBAJ_P0090570 Alkbh8 protein_coding protein_coding MGP_CBAJ_T0090571.1 MGP_CBAJ_G0033960.1 mouse_genomes_project 9 11345 79172 + MGP_CBAJ_P0090571 Alkbh8 protein_coding unknown_likely_coding MGP_CBAJ_T0090572.1 MGP_CBAJ_G0033960.1 mouse_genomes_project 9 14236 79415 + MGP_CBAJ_P0090572 Alkbh8 protein_coding protein_coding MGP_CBAJ_T0091787.1 MGP_CBAJ_G0034441.1 mouse_genomes_project 9 52751489 52789680 - MGP_CBAJ_P0091787 Dixdc1 protein_coding unknown_likely_coding MGP_CBAJ_T0091788.1 MGP_CBAJ_G0034441.1 mouse_genomes_project 9 52752059 52818756 - MGP_CBAJ_P0091788 Dixdc1 protein_coding protein_coding MGP_CBAJ_T0091789.1 MGP_CBAJ_G0034441.1 mouse_genomes_project 9 52752063 52790459 - Dixdc1 protein_coding retained_intron MGP_CBAJ_T0091790.1 MGP_CBAJ_G0034441.1 mouse_genomes_project 9 52752063 52818848 - MGP_CBAJ_P0091790 Dixdc1 protein_coding protein_coding MGP_CBAJ_T0091791.1 MGP_CBAJ_G0034441.1 mouse_genomes_project 9 52755502 52787858 - Dixdc1 protein_coding processed_transcript MGP_CBAJ_T0091792.1 MGP_CBAJ_G0034441.1 mouse_genomes_project 9 52755502 52830337 - MGP_CBAJ_P0091792 Dixdc1 protein_coding protein_coding MGP_CBAJ_T0091793.1 MGP_CBAJ_G0034441.1 mouse_genomes_project 9 52755566 52775506 - Dixdc1 protein_coding retained_intron MGP_CBAJ_T0091794.1 MGP_CBAJ_G0034441.1 mouse_genomes_project 9 52767574 52784891 - MGP_CBAJ_P0091794 Dixdc1 protein_coding protein_coding MGP_CBAJ_T0091795.1 MGP_CBAJ_G0034441.1 mouse_genomes_project 9 52781023 52790534 - Dixdc1 protein_coding processed_transcript MGP_CBAJ_T0091796.1 MGP_CBAJ_G0034441.1 mouse_genomes_project 9 52784559 52789735 - Dixdc1 protein_coding retained_intron MGP_CBAJ_T0091797.1 MGP_CBAJ_G0034441.1 mouse_genomes_project 9 52784737 52788871 - Dixdc1 protein_coding processed_transcript MGP_CBAJ_T0091798.1 MGP_CBAJ_G0034441.1 mouse_genomes_project 9 52800430 52830267 - MGP_CBAJ_P0091798 Dixdc1 protein_coding protein_coding MGP_CBAJ_T0091799.1 MGP_CBAJ_G0034441.1 mouse_genomes_project 9 52800933 52818719 - MGP_CBAJ_P0091799 Dixdc1 protein_coding protein_coding MGP_CBAJ_T0015916.1 MGP_CBAJ_G0014028.1 mouse_genomes_project 9 115868005 115869212 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098469.1 MGP_CBAJ_G0036730.1 mouse_genomes_project 9 27584941 27586302 + Gm15606 sense_intronic sense_intronic MGP_CBAJ_T0098470.1 MGP_CBAJ_G0036730.1 mouse_genomes_project 9 27584994 27586579 + Gm15606 sense_intronic sense_intronic MGP_CBAJ_T0094879.1 MGP_CBAJ_G0035136.1 mouse_genomes_project 9 135130213 135135491 + MGP_CBAJ_P0094879 Cxcr6 protein_coding protein_coding MGP_CBAJ_T0090820.1 MGP_CBAJ_G0034070.1 mouse_genomes_project 9 18860339 18875713 - MGP_CBAJ_P0090820 Olfr18 protein_coding protein_coding MGP_CBAJ_T0092001.1 MGP_CBAJ_G0034507.1 mouse_genomes_project 9 59582275 59617037 + MGP_CBAJ_P0092001 Cspg4 protein_coding protein_coding MGP_CBAJ_T0010973.1 MGP_CBAJ_G0009111.1 mouse_genomes_project 9 119312889 119312957 + Mir7089 miRNA miRNA MGP_CBAJ_T0093249.1 MGP_CBAJ_G0034800.1 mouse_genomes_project 9 104489658 104569837 - MGP_CBAJ_P0093249 Spsb4 protein_coding protein_coding MGP_CBAJ_T0093250.1 MGP_CBAJ_G0034800.1 mouse_genomes_project 9 104489661 104535430 - Spsb4 protein_coding processed_transcript MGP_CBAJ_T0093251.1 MGP_CBAJ_G0034800.1 mouse_genomes_project 9 104490148 104519440 - Spsb4 protein_coding processed_transcript MGP_CBAJ_T0093252.1 MGP_CBAJ_G0034800.1 mouse_genomes_project 9 104545283 104569758 - Spsb4 protein_coding retained_intron MGP_CBAJ_T0091216.1 MGP_CBAJ_G0034205.1 mouse_genomes_project 9 36733165 36734741 + MGP_CBAJ_P0091216 Gm9513 protein_coding protein_coding MGP_CBAJ_T0100912.1 MGP_CBAJ_G0039167.1 mouse_genomes_project 9 119577563 119577701 - Gm23377 snoRNA snoRNA MGP_CBAJ_T0010931.1 MGP_CBAJ_G0009069.1 mouse_genomes_project 9 43541228 43541297 + Gm44311 miRNA miRNA MGP_CBAJ_T0091489.1 MGP_CBAJ_G0034346.1 mouse_genomes_project 9 45412061 45419512 + MGP_CBAJ_P0091489 Mfrp protein_coding protein_coding MGP_CBAJ_T0091490.1 MGP_CBAJ_G0034346.1 mouse_genomes_project 9 45412070 45416852 + MGP_CBAJ_P0091490 Mfrp protein_coding nonsense_mediated_decay MGP_CBAJ_T0091491.1 MGP_CBAJ_G0034346.1 mouse_genomes_project 9 45412086 45419509 + MGP_CBAJ_P0091491 Mfrp protein_coding protein_coding MGP_CBAJ_T0091492.1 MGP_CBAJ_G0034346.1 mouse_genomes_project 9 45412102 45419509 + MGP_CBAJ_P0091492 Mfrp protein_coding protein_coding MGP_CBAJ_T0091493.1 MGP_CBAJ_G0034346.1 mouse_genomes_project 9 45412120 45413630 + MGP_CBAJ_P0091493 Mfrp protein_coding nonsense_mediated_decay MGP_CBAJ_T0091494.1 MGP_CBAJ_G0034346.1 mouse_genomes_project 9 45415508 45416754 + MGP_CBAJ_P0091494 Mfrp protein_coding protein_coding MGP_CBAJ_T0009168.1 MGP_CBAJ_G0007358.1 mouse_genomes_project 9 79770040 79772515 - Gm28182 lincRNA lincRNA MGP_CBAJ_T0005376.1 MGP_CBAJ_G0004542.1 mouse_genomes_project 9 60944363 60968529 + Gm16130 antisense antisense MGP_CBAJ_T0091761.1 MGP_CBAJ_G0034432.1 mouse_genomes_project 9 52599607 52606630 - MGP_CBAJ_P0091761 Pts protein_coding protein_coding MGP_CBAJ_T0009251.1 MGP_CBAJ_G0007422.1 mouse_genomes_project 9 134079483 134099250 - A530083I20Rik lincRNA lincRNA MGP_CBAJ_T0009252.1 MGP_CBAJ_G0007422.1 mouse_genomes_project 9 134089707 134099236 - A530083I20Rik lincRNA lincRNA MGP_CBAJ_T0000316.1 MGP_CBAJ_G0000261.1 mouse_genomes_project 9 134328412 134328483 + mt-Tn Mt_tRNA Mt_tRNA MGP_CBAJ_T0090941.1 MGP_CBAJ_G0034108.1 mouse_genomes_project 9 20232574 20235381 - MGP_CBAJ_P0090941 Tmed1 protein_coding protein_coding MGP_CBAJ_T0092854.1 MGP_CBAJ_G0034726.1 mouse_genomes_project 9 84064316 84117076 - MGP_CBAJ_P0092854 Slc17a5 protein_coding protein_coding MGP_CBAJ_T0092855.1 MGP_CBAJ_G0034726.1 mouse_genomes_project 9 84064334 84117050 - MGP_CBAJ_P0092855 Slc17a5 protein_coding protein_coding MGP_CBAJ_T0092856.1 MGP_CBAJ_G0034726.1 mouse_genomes_project 9 84098892 84117062 - MGP_CBAJ_P0092856 Slc17a5 protein_coding protein_coding MGP_CBAJ_T0091008.1 MGP_CBAJ_G0034138.1 mouse_genomes_project 9 21146632 21180872 - MGP_CBAJ_P0091008 Zfp810 protein_coding protein_coding MGP_CBAJ_T0010958.1 MGP_CBAJ_G0009096.1 mouse_genomes_project 9 99257529 99257633 - Mir6386 miRNA miRNA MGP_CBAJ_T0015900.1 MGP_CBAJ_G0014012.1 mouse_genomes_project 9 107824511 107825337 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0094702.1 MGP_CBAJ_G0035077.1 mouse_genomes_project 9 130803002 130814889 - MGP_CBAJ_P0094702 Gorasp1 protein_coding protein_coding MGP_CBAJ_T0091943.1 MGP_CBAJ_G0034491.1 mouse_genomes_project 9 57548008 57568151 - MGP_CBAJ_P0091943 Chrnb4 protein_coding protein_coding MGP_CBAJ_T0093011.1 MGP_CBAJ_G0034754.1 mouse_genomes_project 9 93139432 93254273 - MGP_CBAJ_P0093011 Snap91 protein_coding protein_coding MGP_CBAJ_T0093012.1 MGP_CBAJ_G0034754.1 mouse_genomes_project 9 93139442 93183070 - Snap91 protein_coding retained_intron MGP_CBAJ_T0093013.1 MGP_CBAJ_G0034754.1 mouse_genomes_project 9 93139445 93254283 - MGP_CBAJ_P0093013 Snap91 protein_coding protein_coding MGP_CBAJ_T0093014.1 MGP_CBAJ_G0034754.1 mouse_genomes_project 9 93139445 93254283 - MGP_CBAJ_P0093014 Snap91 protein_coding protein_coding MGP_CBAJ_T0093015.1 MGP_CBAJ_G0034754.1 mouse_genomes_project 9 93140187 93254248 - MGP_CBAJ_P0093015 Snap91 protein_coding protein_coding MGP_CBAJ_T0093016.1 MGP_CBAJ_G0034754.1 mouse_genomes_project 9 93148888 93173028 - Snap91 protein_coding retained_intron MGP_CBAJ_T0093017.1 MGP_CBAJ_G0034754.1 mouse_genomes_project 9 93166926 93173202 - Snap91 protein_coding retained_intron MGP_CBAJ_T0093018.1 MGP_CBAJ_G0034754.1 mouse_genomes_project 9 93180813 93203622 - Snap91 protein_coding processed_transcript MGP_CBAJ_T0093019.1 MGP_CBAJ_G0034754.1 mouse_genomes_project 9 93197216 93254488 - Snap91 protein_coding retained_intron MGP_CBAJ_T0093020.1 MGP_CBAJ_G0034754.1 mouse_genomes_project 9 93209407 93254231 - MGP_CBAJ_P0093020 Snap91 protein_coding protein_coding MGP_CBAJ_T0094861.1 MGP_CBAJ_G0035131.1 mouse_genomes_project 9 134900571 134924895 - MGP_CBAJ_P0094861 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094862.1 MGP_CBAJ_G0035131.1 mouse_genomes_project 9 134902175 134925113 - protein_coding processed_transcript MGP_CBAJ_T0005424.1 MGP_CBAJ_G0004573.1 mouse_genomes_project 9 104217093 104224745 + A930006L05Rik antisense antisense MGP_CBAJ_T0090829.1 MGP_CBAJ_G0034073.1 mouse_genomes_project 9 19028714 19038422 - MGP_CBAJ_P0090829 Zfp426 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090830.1 MGP_CBAJ_G0034073.1 mouse_genomes_project 9 19028873 19052898 - MGP_CBAJ_P0090830 Zfp426 protein_coding protein_coding MGP_CBAJ_T0090831.1 MGP_CBAJ_G0034073.1 mouse_genomes_project 9 19029085 19038309 - MGP_CBAJ_P0090831 Zfp426 protein_coding protein_coding MGP_CBAJ_T0090832.1 MGP_CBAJ_G0034073.1 mouse_genomes_project 9 19029991 19052898 - MGP_CBAJ_P0090832 Zfp426 protein_coding protein_coding MGP_CBAJ_T0090833.1 MGP_CBAJ_G0034073.1 mouse_genomes_project 9 19031150 19033628 - Zfp426 protein_coding retained_intron MGP_CBAJ_T0090834.1 MGP_CBAJ_G0034073.1 mouse_genomes_project 9 19031296 19052887 - MGP_CBAJ_P0090834 Zfp426 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090835.1 MGP_CBAJ_G0034073.1 mouse_genomes_project 9 19031341 19050961 - MGP_CBAJ_P0090835 Zfp426 protein_coding protein_coding MGP_CBAJ_T0090836.1 MGP_CBAJ_G0034073.1 mouse_genomes_project 9 19033270 19038406 - MGP_CBAJ_P0090836 Zfp426 protein_coding protein_coding MGP_CBAJ_T0090837.1 MGP_CBAJ_G0034073.1 mouse_genomes_project 9 19035101 19052857 - MGP_CBAJ_P0090837 Zfp426 protein_coding protein_coding MGP_CBAJ_T0090838.1 MGP_CBAJ_G0034073.1 mouse_genomes_project 9 19036581 19052867 - MGP_CBAJ_P0090838 Zfp426 protein_coding protein_coding MGP_CBAJ_T0094515.1 MGP_CBAJ_G0035023.1 mouse_genomes_project 9 120921217 120928373 + MGP_CBAJ_P0094515 Epm2aip1 protein_coding protein_coding MGP_CBAJ_T0094516.1 MGP_CBAJ_G0035023.1 mouse_genomes_project 9 120921233 120928377 + MGP_CBAJ_P0094516 Epm2aip1 protein_coding protein_coding MGP_CBAJ_T0094517.1 MGP_CBAJ_G0035023.1 mouse_genomes_project 9 120923390 120926817 + Epm2aip1 protein_coding processed_transcript MGP_CBAJ_T0005347.1 MGP_CBAJ_G0004525.1 mouse_genomes_project 9 37349846 37354755 + Gm3896 antisense antisense MGP_CBAJ_T0093384.1 MGP_CBAJ_G0034835.1 mouse_genomes_project 9 109555647 109556778 - MGP_CBAJ_P0093384 Gm5145 protein_coding protein_coding MGP_CBAJ_T0090756.1 MGP_CBAJ_G0034023.1 mouse_genomes_project 9 13571026 13644782 - MGP_CBAJ_P0090756 Ccdc67 protein_coding protein_coding MGP_CBAJ_T0090757.1 MGP_CBAJ_G0034023.1 mouse_genomes_project 9 13571032 13649425 - MGP_CBAJ_P0090757 Ccdc67 protein_coding protein_coding MGP_CBAJ_T0090758.1 MGP_CBAJ_G0034023.1 mouse_genomes_project 9 13571720 13649395 - MGP_CBAJ_P0090758 Ccdc67 protein_coding protein_coding MGP_CBAJ_T0090759.1 MGP_CBAJ_G0034023.1 mouse_genomes_project 9 13585722 13601863 - Ccdc67 protein_coding processed_transcript MGP_CBAJ_T0090760.1 MGP_CBAJ_G0034023.1 mouse_genomes_project 9 13597899 13649406 - MGP_CBAJ_P0090760 Ccdc67 protein_coding protein_coding MGP_CBAJ_T0094711.1 MGP_CBAJ_G0035082.1 mouse_genomes_project 9 130989403 130992176 + MGP_CBAJ_P0094711 Ccr8 protein_coding protein_coding MGP_CBAJ_T0090990.1 MGP_CBAJ_G0034129.1 mouse_genomes_project 9 20889092 20907315 - MGP_CBAJ_P0090990 Zfp653 protein_coding protein_coding MGP_CBAJ_T0090991.1 MGP_CBAJ_G0034129.1 mouse_genomes_project 9 20889092 20907315 - MGP_CBAJ_P0090991 Zfp653 protein_coding protein_coding MGP_CBAJ_T0092554.1 MGP_CBAJ_G0034657.1 mouse_genomes_project 9 75088206 75151395 - MGP_CBAJ_P0092554 Fam63b protein_coding protein_coding MGP_CBAJ_T0100849.1 MGP_CBAJ_G0039104.1 mouse_genomes_project 9 13288821 13288958 + Gm25791 snoRNA snoRNA MGP_CBAJ_T0015836.1 MGP_CBAJ_G0013948.1 mouse_genomes_project 9 78477930 78478090 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009147.1 MGP_CBAJ_G0007342.1 mouse_genomes_project 9 63914500 63917183 + B930082K07Rik lincRNA lincRNA MGP_CBAJ_T0010983.1 MGP_CBAJ_G0009121.1 mouse_genomes_project 9 133408617 133408756 - Mir8106 miRNA miRNA MGP_CBAJ_T0100870.1 MGP_CBAJ_G0039125.1 mouse_genomes_project 9 41684271 41684361 + Snord14e snoRNA snoRNA MGP_CBAJ_T0093285.1 MGP_CBAJ_G0034814.1 mouse_genomes_project 9 106693466 106694707 + MGP_CBAJ_P0093285 Foxl2 protein_coding protein_coding MGP_CBAJ_T0090796.1 MGP_CBAJ_G0034046.1 mouse_genomes_project 9 17719068 17719998 + MGP_CBAJ_P0090796 protein_coding protein_coding MGP_CBAJ_T0092105.1 MGP_CBAJ_G0034539.1 mouse_genomes_project 9 61090009 61092966 - MGP_CBAJ_P0092105 Islr protein_coding protein_coding MGP_CBAJ_T0092106.1 MGP_CBAJ_G0034539.1 mouse_genomes_project 9 61090009 61092299 - MGP_CBAJ_P0092106 Islr protein_coding protein_coding MGP_CBAJ_T0091102.1 MGP_CBAJ_G0034170.1 mouse_genomes_project 9 30650045 30688108 + MGP_CBAJ_P0091102 Zbtb44 protein_coding protein_coding MGP_CBAJ_T0091103.1 MGP_CBAJ_G0034170.1 mouse_genomes_project 9 30672374 30687836 + MGP_CBAJ_P0091103 Zbtb44 protein_coding protein_coding MGP_CBAJ_T0010961.1 MGP_CBAJ_G0009099.1 mouse_genomes_project 9 112832863 112832938 + Mir2136 miRNA miRNA MGP_CBAJ_T0010976.1 MGP_CBAJ_G0009114.1 mouse_genomes_project 9 120517138 120517215 + Gm24269 miRNA miRNA MGP_CBAJ_T0091555.1 MGP_CBAJ_G0034369.1 mouse_genomes_project 9 46008608 46047228 + MGP_CBAJ_P0091555 Ddx6 protein_coding unknown_likely_coding MGP_CBAJ_T0092230.1 MGP_CBAJ_G0034570.1 mouse_genomes_project 9 65268185 65297497 - MGP_CBAJ_P0092230 Kif23 protein_coding protein_coding MGP_CBAJ_T0015872.1 MGP_CBAJ_G0013984.1 mouse_genomes_project 9 96434212 96434675 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099600.1 MGP_CBAJ_G0037855.1 mouse_genomes_project 9 45861060 45861177 - Gm22540 snRNA snRNA MGP_CBAJ_T0094797.1 MGP_CBAJ_G0035104.1 mouse_genomes_project 9 132915294 132929381 - MGP_CBAJ_P0094797 Higd1a protein_coding protein_coding MGP_CBAJ_T0018329.1 MGP_CBAJ_G0015502.1 mouse_genomes_project 9 124465673 124479645 + processed_transcript processed_transcript MGP_CBAJ_T0018330.1 MGP_CBAJ_G0015502.1 mouse_genomes_project 9 124465694 124478862 + processed_transcript processed_transcript MGP_CBAJ_T0018331.1 MGP_CBAJ_G0015502.1 mouse_genomes_project 9 124465786 124470915 + processed_transcript processed_transcript MGP_CBAJ_T0098504.1 MGP_CBAJ_G0036759.1 mouse_genomes_project 9 135093217 135114784 - Gm17021 sense_overlapping sense_overlapping MGP_CBAJ_T0009175.1 MGP_CBAJ_G0007364.1 mouse_genomes_project 9 85827555 85829961 - Gm17477 lincRNA lincRNA MGP_CBAJ_T0091666.1 MGP_CBAJ_G0034399.1 mouse_genomes_project 9 47491588 47498013 - MGP_CBAJ_P0091666 Tagln protein_coding protein_coding MGP_CBAJ_T0093944.1 MGP_CBAJ_G0034930.1 mouse_genomes_project 9 116879118 116886318 + MGP_CBAJ_P0093944 Cdhr4 protein_coding protein_coding MGP_CBAJ_T0093945.1 MGP_CBAJ_G0034930.1 mouse_genomes_project 9 116882323 116884696 + MGP_CBAJ_P0093945 Cdhr4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093946.1 MGP_CBAJ_G0034930.1 mouse_genomes_project 9 116882359 116883208 + Cdhr4 protein_coding retained_intron MGP_CBAJ_T0093947.1 MGP_CBAJ_G0034930.1 mouse_genomes_project 9 116882365 116886306 + Cdhr4 protein_coding retained_intron MGP_CBAJ_T0093948.1 MGP_CBAJ_G0034930.1 mouse_genomes_project 9 116882389 116882992 + Cdhr4 protein_coding retained_intron MGP_CBAJ_T0093949.1 MGP_CBAJ_G0034930.1 mouse_genomes_project 9 116882396 116886309 + Cdhr4 protein_coding retained_intron MGP_CBAJ_T0093950.1 MGP_CBAJ_G0034930.1 mouse_genomes_project 9 116882416 116883564 + Cdhr4 protein_coding retained_intron MGP_CBAJ_T0093951.1 MGP_CBAJ_G0034930.1 mouse_genomes_project 9 116882539 116884296 + Cdhr4 protein_coding processed_transcript MGP_CBAJ_T0093952.1 MGP_CBAJ_G0034930.1 mouse_genomes_project 9 116882577 116886318 + MGP_CBAJ_P0093952 Cdhr4 protein_coding protein_coding MGP_CBAJ_T0093953.1 MGP_CBAJ_G0034930.1 mouse_genomes_project 9 116882631 116883791 + Cdhr4 protein_coding retained_intron MGP_CBAJ_T0093955.1 MGP_CBAJ_G0034930.1 mouse_genomes_project 9 116883249 116886313 + MGP_CBAJ_P0093955 Cdhr4 protein_coding protein_coding MGP_CBAJ_T0093956.1 MGP_CBAJ_G0034930.1 mouse_genomes_project 9 116884005 116886314 + MGP_CBAJ_P0093956 Cdhr4 protein_coding protein_coding MGP_CBAJ_T0093957.1 MGP_CBAJ_G0034930.1 mouse_genomes_project 9 116884226 116886311 + MGP_CBAJ_P0093957 Cdhr4 protein_coding protein_coding MGP_CBAJ_T0093958.1 MGP_CBAJ_G0034930.1 mouse_genomes_project 9 116884311 116886313 + MGP_CBAJ_P0093958 Cdhr4 protein_coding protein_coding MGP_CBAJ_T0094813.1 MGP_CBAJ_G0035112.1 mouse_genomes_project 9 133501286 133535117 + MGP_CBAJ_P0094813 Abhd5 protein_coding protein_coding MGP_CBAJ_T0094814.1 MGP_CBAJ_G0035112.1 mouse_genomes_project 9 133501408 133535117 + MGP_CBAJ_P0094814 Abhd5 protein_coding protein_coding MGP_CBAJ_T0094815.1 MGP_CBAJ_G0035112.1 mouse_genomes_project 9 133501408 133533418 + MGP_CBAJ_P0094815 Abhd5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094816.1 MGP_CBAJ_G0035112.1 mouse_genomes_project 9 133501410 133510987 + Abhd5 protein_coding processed_transcript MGP_CBAJ_T0094817.1 MGP_CBAJ_G0035112.1 mouse_genomes_project 9 133501410 133531525 + MGP_CBAJ_P0094817 Abhd5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094818.1 MGP_CBAJ_G0035112.1 mouse_genomes_project 9 133517248 133521857 + MGP_CBAJ_P0094818 Abhd5 protein_coding protein_coding MGP_CBAJ_T0009130.1 MGP_CBAJ_G0007328.1 mouse_genomes_project 9 45443671 45459564 - Gm10687 lincRNA lincRNA MGP_CBAJ_T0091472.1 MGP_CBAJ_G0034339.1 mouse_genomes_project 9 44428469 44453426 + MGP_CBAJ_P0091472 protein_coding protein_coding MGP_CBAJ_T0091473.1 MGP_CBAJ_G0034339.1 mouse_genomes_project 9 44428506 44453354 + MGP_CBAJ_P0091473 protein_coding unknown_likely_coding MGP_CBAJ_T0092438.1 MGP_CBAJ_G0034630.1 mouse_genomes_project 9 70505141 70511273 - MGP_CBAJ_P0092438 Fbxl22 protein_coding protein_coding MGP_CBAJ_T0092520.1 MGP_CBAJ_G0034649.1 mouse_genomes_project 9 74405523 74424313 + MGP_CBAJ_P0092520 Bnip2 protein_coding protein_coding MGP_CBAJ_T0092521.1 MGP_CBAJ_G0034649.1 mouse_genomes_project 9 74405561 74424251 + MGP_CBAJ_P0092521 Bnip2 protein_coding protein_coding MGP_CBAJ_T0092522.1 MGP_CBAJ_G0034649.1 mouse_genomes_project 9 74405572 74419997 + MGP_CBAJ_P0092522 Bnip2 protein_coding protein_coding MGP_CBAJ_T0092523.1 MGP_CBAJ_G0034649.1 mouse_genomes_project 9 74405574 74415151 + MGP_CBAJ_P0092523 Bnip2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092524.1 MGP_CBAJ_G0034649.1 mouse_genomes_project 9 74411473 74423111 + MGP_CBAJ_P0092524 Bnip2 protein_coding protein_coding MGP_CBAJ_T0092525.1 MGP_CBAJ_G0034649.1 mouse_genomes_project 9 74413168 74418229 + Bnip2 protein_coding retained_intron MGP_CBAJ_T0092526.1 MGP_CBAJ_G0034649.1 mouse_genomes_project 9 74414224 74419627 + Bnip2 protein_coding processed_transcript MGP_CBAJ_T0092527.1 MGP_CBAJ_G0034649.1 mouse_genomes_project 9 74419368 74420753 + MGP_CBAJ_P0092527 Bnip2 protein_coding protein_coding MGP_CBAJ_T0005465.1 MGP_CBAJ_G0004605.1 mouse_genomes_project 9 118734976 118758020 + antisense antisense MGP_CBAJ_T0009225.1 MGP_CBAJ_G0007403.1 mouse_genomes_project 9 116434551 116437786 - Lsmem2 lincRNA lincRNA MGP_CBAJ_T0009184.1 MGP_CBAJ_G0007371.1 mouse_genomes_project 9 94748575 94751716 + Gm28231 lincRNA lincRNA MGP_CBAJ_T0010955.1 MGP_CBAJ_G0009093.1 mouse_genomes_project 9 77748549 77748671 + Gm27353 miRNA miRNA MGP_CBAJ_T0093516.1 MGP_CBAJ_G0034862.1 mouse_genomes_project 9 113556123 113584987 + MGP_CBAJ_P0093516 Mrpl3 protein_coding protein_coding MGP_CBAJ_T0093517.1 MGP_CBAJ_G0034862.1 mouse_genomes_project 9 113556123 113581567 + MGP_CBAJ_P0093517 Mrpl3 protein_coding protein_coding MGP_CBAJ_T0093518.1 MGP_CBAJ_G0034862.1 mouse_genomes_project 9 113556154 113564810 + MGP_CBAJ_P0093518 Mrpl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093519.1 MGP_CBAJ_G0034862.1 mouse_genomes_project 9 113556154 113558486 + MGP_CBAJ_P0093519 Mrpl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093520.1 MGP_CBAJ_G0034862.1 mouse_genomes_project 9 113556185 113582561 + MGP_CBAJ_P0093520 Mrpl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093521.1 MGP_CBAJ_G0034862.1 mouse_genomes_project 9 113576236 113579161 + Mrpl3 protein_coding retained_intron MGP_CBAJ_T0002434.1 MGP_CBAJ_G0002346.1 mouse_genomes_project 9 121074243 121075739 + TEC TEC MGP_CBAJ_T0092830.1 MGP_CBAJ_G0034716.1 mouse_genomes_project 9 83657740 83721221 + MGP_CBAJ_P0092830 protein_coding protein_coding MGP_CBAJ_T0009169.1 MGP_CBAJ_G0007359.1 mouse_genomes_project 9 80396981 80406421 + 4933433G15Rik lincRNA lincRNA MGP_CBAJ_T0009170.1 MGP_CBAJ_G0007359.1 mouse_genomes_project 9 80396981 80404244 + 4933433G15Rik lincRNA lincRNA MGP_CBAJ_T0091075.1 MGP_CBAJ_G0034163.1 mouse_genomes_project 9 26712601 26717487 + MGP_CBAJ_P0091075 Spata19 protein_coding protein_coding MGP_CBAJ_T0002422.1 MGP_CBAJ_G0002334.1 mouse_genomes_project 9 117430629 117431643 + TEC TEC MGP_CBAJ_T0091268.1 MGP_CBAJ_G0034215.1 mouse_genomes_project 9 37570975 37587622 + MGP_CBAJ_P0091268 Tmem218 protein_coding protein_coding MGP_CBAJ_T0094610.1 MGP_CBAJ_G0035052.1 mouse_genomes_project 9 126976338 127742313 - MGP_CBAJ_P0094610 Rbms3 protein_coding protein_coding MGP_CBAJ_T0094611.1 MGP_CBAJ_G0035052.1 mouse_genomes_project 9 126980892 127742329 - MGP_CBAJ_P0094611 Rbms3 protein_coding protein_coding MGP_CBAJ_T0094612.1 MGP_CBAJ_G0035052.1 mouse_genomes_project 9 126981175 127273668 - MGP_CBAJ_P0094612 Rbms3 protein_coding protein_coding MGP_CBAJ_T0094613.1 MGP_CBAJ_G0035052.1 mouse_genomes_project 9 126981611 127741976 - MGP_CBAJ_P0094613 Rbms3 protein_coding protein_coding MGP_CBAJ_T0094614.1 MGP_CBAJ_G0035052.1 mouse_genomes_project 9 126981611 128161130 - MGP_CBAJ_P0094614 Rbms3 protein_coding protein_coding MGP_CBAJ_T0094615.1 MGP_CBAJ_G0035052.1 mouse_genomes_project 9 126981612 127741967 - MGP_CBAJ_P0094615 Rbms3 protein_coding protein_coding MGP_CBAJ_T0094616.1 MGP_CBAJ_G0035052.1 mouse_genomes_project 9 126982102 127742333 - MGP_CBAJ_P0094616 Rbms3 protein_coding protein_coding MGP_CBAJ_T0094617.1 MGP_CBAJ_G0035052.1 mouse_genomes_project 9 126986468 127273681 - MGP_CBAJ_P0094617 Rbms3 protein_coding protein_coding MGP_CBAJ_T0094618.1 MGP_CBAJ_G0035052.1 mouse_genomes_project 9 127102132 127742332 - Rbms3 protein_coding retained_intron MGP_CBAJ_T0094619.1 MGP_CBAJ_G0035052.1 mouse_genomes_project 9 127254697 127741651 - MGP_CBAJ_P0094619 Rbms3 protein_coding protein_coding MGP_CBAJ_T0094620.1 MGP_CBAJ_G0035052.1 mouse_genomes_project 9 127297795 127742329 - Rbms3 protein_coding processed_transcript MGP_CBAJ_T0094621.1 MGP_CBAJ_G0035052.1 mouse_genomes_project 9 127402299 127741447 - Rbms3 protein_coding processed_transcript MGP_CBAJ_T0010927.1 MGP_CBAJ_G0009065.1 mouse_genomes_project 9 39655018 39655098 - Gm25529 miRNA miRNA MGP_CBAJ_T0091911.1 MGP_CBAJ_G0034479.1 mouse_genomes_project 9 56983376 57003978 - MGP_CBAJ_P0091911 Cib2 protein_coding protein_coding MGP_CBAJ_T0010917.1 MGP_CBAJ_G0009055.1 mouse_genomes_project 9 18509463 18509530 + Gm26231 miRNA miRNA MGP_CBAJ_T0091972.1 MGP_CBAJ_G0034497.1 mouse_genomes_project 9 58126623 58130523 + MGP_CBAJ_P0091972 Isl2 protein_coding protein_coding MGP_CBAJ_T0091973.1 MGP_CBAJ_G0034497.1 mouse_genomes_project 9 58129099 58134133 + MGP_CBAJ_P0091973 Isl2 protein_coding protein_coding MGP_CBAJ_T0091974.1 MGP_CBAJ_G0034497.1 mouse_genomes_project 9 58129158 58134133 + MGP_CBAJ_P0091974 Isl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091975.1 MGP_CBAJ_G0034497.1 mouse_genomes_project 9 58129158 58134131 + MGP_CBAJ_P0091975 Isl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091976.1 MGP_CBAJ_G0034497.1 mouse_genomes_project 9 58130288 58132233 + Isl2 protein_coding retained_intron MGP_CBAJ_T0100895.1 MGP_CBAJ_G0039150.1 mouse_genomes_project 9 92108288 92108418 - Gm22830 snoRNA snoRNA MGP_CBAJ_T0094723.1 MGP_CBAJ_G0035086.1 mouse_genomes_project 9 131202738 131388681 + MGP_CBAJ_P0094723 Myrip protein_coding protein_coding MGP_CBAJ_T0094724.1 MGP_CBAJ_G0035086.1 mouse_genomes_project 9 131290424 131331324 + MGP_CBAJ_P0094724 Myrip protein_coding protein_coding MGP_CBAJ_T0094725.1 MGP_CBAJ_G0035086.1 mouse_genomes_project 9 131316750 131323933 + Myrip protein_coding processed_transcript MGP_CBAJ_T0094726.1 MGP_CBAJ_G0035086.1 mouse_genomes_project 9 131334091 131339145 + Myrip protein_coding processed_transcript MGP_CBAJ_T0094358.1 MGP_CBAJ_G0034993.1 mouse_genomes_project 9 119573573 119619200 + MGP_CBAJ_P0094358 Smarcc1 protein_coding protein_coding MGP_CBAJ_T0094359.1 MGP_CBAJ_G0034993.1 mouse_genomes_project 9 119594713 119725052 + MGP_CBAJ_P0094359 Smarcc1 protein_coding protein_coding MGP_CBAJ_T0094360.1 MGP_CBAJ_G0034993.1 mouse_genomes_project 9 119594767 119698623 + Smarcc1 protein_coding retained_intron MGP_CBAJ_T0094361.1 MGP_CBAJ_G0034993.1 mouse_genomes_project 9 119594767 119719875 + MGP_CBAJ_P0094361 Smarcc1 protein_coding protein_coding MGP_CBAJ_T0094362.1 MGP_CBAJ_G0034993.1 mouse_genomes_project 9 119594767 119725052 + MGP_CBAJ_P0094362 Smarcc1 protein_coding protein_coding MGP_CBAJ_T0094363.1 MGP_CBAJ_G0034993.1 mouse_genomes_project 9 119594767 119669315 + MGP_CBAJ_P0094363 Smarcc1 protein_coding protein_coding MGP_CBAJ_T0094364.1 MGP_CBAJ_G0034993.1 mouse_genomes_project 9 119670742 119690864 + Smarcc1 protein_coding retained_intron MGP_CBAJ_T0094365.1 MGP_CBAJ_G0034993.1 mouse_genomes_project 9 119719489 119721761 + MGP_CBAJ_P0094365 Smarcc1 protein_coding protein_coding MGP_CBAJ_T0094366.1 MGP_CBAJ_G0034993.1 mouse_genomes_project 9 119720754 119721752 + Smarcc1 protein_coding retained_intron MGP_CBAJ_T0090896.1 MGP_CBAJ_G0034097.1 mouse_genomes_project 9 19811023 19863050 + MGP_CBAJ_P0090896 Pde4a protein_coding protein_coding MGP_CBAJ_T0090897.1 MGP_CBAJ_G0034097.1 mouse_genomes_project 9 19829077 19861429 + Pde4a protein_coding retained_intron MGP_CBAJ_T0090898.1 MGP_CBAJ_G0034097.1 mouse_genomes_project 9 19831562 19840960 + Pde4a protein_coding retained_intron MGP_CBAJ_T0090899.1 MGP_CBAJ_G0034097.1 mouse_genomes_project 9 19831564 19861429 + MGP_CBAJ_P0090899 Pde4a protein_coding protein_coding MGP_CBAJ_T0090900.1 MGP_CBAJ_G0034097.1 mouse_genomes_project 9 19839658 19842217 + Pde4a protein_coding retained_intron MGP_CBAJ_T0090901.1 MGP_CBAJ_G0034097.1 mouse_genomes_project 9 19844015 19861429 + MGP_CBAJ_P0090901 Pde4a protein_coding protein_coding MGP_CBAJ_T0000315.1 MGP_CBAJ_G0000260.1 mouse_genomes_project 9 134328314 134328381 + mt-Tc Mt_tRNA Mt_tRNA MGP_CBAJ_T0092062.1 MGP_CBAJ_G0034531.1 mouse_genomes_project 9 60565156 60611172 + MGP_CBAJ_P0092062 Edc3 protein_coding protein_coding MGP_CBAJ_T0092063.1 MGP_CBAJ_G0034531.1 mouse_genomes_project 9 60565171 60610076 + MGP_CBAJ_P0092063 Edc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092064.1 MGP_CBAJ_G0034531.1 mouse_genomes_project 9 60565183 60574997 + MGP_CBAJ_P0092064 Edc3 protein_coding protein_coding MGP_CBAJ_T0092964.1 MGP_CBAJ_G0034745.1 mouse_genomes_project 9 91605759 91612667 - MGP_CBAJ_P0092964 Fam46a protein_coding protein_coding MGP_CBAJ_T0092965.1 MGP_CBAJ_G0034745.1 mouse_genomes_project 9 91605759 91612443 - MGP_CBAJ_P0092965 Fam46a protein_coding protein_coding MGP_CBAJ_T0093678.1 MGP_CBAJ_G0034892.1 mouse_genomes_project 9 115404064 115409073 - MGP_CBAJ_P0093678 Grm2 protein_coding protein_coding MGP_CBAJ_T0093679.1 MGP_CBAJ_G0034892.1 mouse_genomes_project 9 115405496 115417065 - MGP_CBAJ_P0093679 Grm2 protein_coding unknown_likely_coding MGP_CBAJ_T0093680.1 MGP_CBAJ_G0034892.1 mouse_genomes_project 9 115405854 115417048 - MGP_CBAJ_P0093680 Grm2 protein_coding protein_coding MGP_CBAJ_T0093681.1 MGP_CBAJ_G0034892.1 mouse_genomes_project 9 115405953 115407583 - Grm2 protein_coding processed_transcript MGP_CBAJ_T0091195.1 MGP_CBAJ_G0034191.1 mouse_genomes_project 9 35618150 35644484 - MGP_CBAJ_P0091195 Ddx25 protein_coding protein_coding MGP_CBAJ_T0015849.1 MGP_CBAJ_G0013961.1 mouse_genomes_project 9 82560345 82560747 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0091357.1 MGP_CBAJ_G0034276.1 mouse_genomes_project 9 39588926 39589859 - MGP_CBAJ_P0091357 Olfr934 protein_coding protein_coding MGP_CBAJ_T0002417.1 MGP_CBAJ_G0002329.1 mouse_genomes_project 9 116472470 116474234 - TEC TEC MGP_CBAJ_T0093527.1 MGP_CBAJ_G0034864.1 mouse_genomes_project 9 113656182 113657911 - MGP_CBAJ_P0093527 1700080E11Rik protein_coding protein_coding MGP_CBAJ_T0093528.1 MGP_CBAJ_G0034864.1 mouse_genomes_project 9 113657130 113657895 - MGP_CBAJ_P0093528 1700080E11Rik protein_coding protein_coding MGP_CBAJ_T0092819.1 MGP_CBAJ_G0034712.1 mouse_genomes_project 9 83457044 83517678 + MGP_CBAJ_P0092819 Ick protein_coding protein_coding MGP_CBAJ_T0092820.1 MGP_CBAJ_G0034712.1 mouse_genomes_project 9 83457087 83461280 + MGP_CBAJ_P0092820 Ick protein_coding protein_coding MGP_CBAJ_T0092821.1 MGP_CBAJ_G0034712.1 mouse_genomes_project 9 83460693 83466320 + Ick protein_coding processed_transcript MGP_CBAJ_T0092822.1 MGP_CBAJ_G0034712.1 mouse_genomes_project 9 83461091 83481974 + Ick protein_coding retained_intron MGP_CBAJ_T0092823.1 MGP_CBAJ_G0034712.1 mouse_genomes_project 9 83461134 83473507 + MGP_CBAJ_P0092823 Ick protein_coding protein_coding MGP_CBAJ_T0092824.1 MGP_CBAJ_G0034712.1 mouse_genomes_project 9 83461150 83515152 + MGP_CBAJ_P0092824 Ick protein_coding protein_coding MGP_CBAJ_T0092825.1 MGP_CBAJ_G0034712.1 mouse_genomes_project 9 83461165 83521857 + MGP_CBAJ_P0092825 Ick protein_coding protein_coding MGP_CBAJ_T0092826.1 MGP_CBAJ_G0034712.1 mouse_genomes_project 9 83503195 83520203 + Ick protein_coding retained_intron MGP_CBAJ_T0093758.1 MGP_CBAJ_G0034906.1 mouse_genomes_project 9 116382283 116385764 + MGP_CBAJ_P0093758 Nprl2 protein_coding protein_coding MGP_CBAJ_T0093759.1 MGP_CBAJ_G0034906.1 mouse_genomes_project 9 116382298 116384692 + MGP_CBAJ_P0093759 Nprl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093760.1 MGP_CBAJ_G0034906.1 mouse_genomes_project 9 116382302 116385753 + Nprl2 protein_coding retained_intron MGP_CBAJ_T0093761.1 MGP_CBAJ_G0034906.1 mouse_genomes_project 9 116382318 116383747 + Nprl2 protein_coding retained_intron MGP_CBAJ_T0093762.1 MGP_CBAJ_G0034906.1 mouse_genomes_project 9 116384035 116384518 + Nprl2 protein_coding retained_intron MGP_CBAJ_T0005331.1 MGP_CBAJ_G0004514.1 mouse_genomes_project 9 12607120 12621504 + Gm10706 antisense antisense MGP_CBAJ_T0099643.1 MGP_CBAJ_G0037898.1 mouse_genomes_project 9 117766470 117766577 - Gm24259 snRNA snRNA MGP_CBAJ_T0091095.1 MGP_CBAJ_G0034166.1 mouse_genomes_project 9 29965099 29969931 + MGP_CBAJ_P0091095 Pla2g2e protein_coding protein_coding MGP_CBAJ_T0091096.1 MGP_CBAJ_G0034166.1 mouse_genomes_project 9 29965128 29969597 + MGP_CBAJ_P0091096 Pla2g2e protein_coding protein_coding MGP_CBAJ_T0091097.1 MGP_CBAJ_G0034166.1 mouse_genomes_project 9 29966512 29969931 + MGP_CBAJ_P0091097 Pla2g2e protein_coding protein_coding MGP_CBAJ_T0015854.1 MGP_CBAJ_G0013966.1 mouse_genomes_project 9 86707182 86710862 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0090805.1 MGP_CBAJ_G0034055.1 mouse_genomes_project 9 18011875 18012867 + MGP_CBAJ_P0090805 Olfr855 protein_coding protein_coding MGP_CBAJ_T0091305.1 MGP_CBAJ_G0034231.1 mouse_genomes_project 9 38264577 38265625 + MGP_CBAJ_P0091305 Olfr876 protein_coding protein_coding MGP_CBAJ_T0005473.1 MGP_CBAJ_G0004613.1 mouse_genomes_project 9 126328963 126342896 - Gm16142 antisense antisense MGP_CBAJ_T0093853.1 MGP_CBAJ_G0034919.1 mouse_genomes_project 9 116524987 116555572 - MGP_CBAJ_P0093853 Sema3f protein_coding protein_coding MGP_CBAJ_T0093854.1 MGP_CBAJ_G0034919.1 mouse_genomes_project 9 116525905 116550649 - MGP_CBAJ_P0093854 Sema3f protein_coding protein_coding MGP_CBAJ_T0093855.1 MGP_CBAJ_G0034919.1 mouse_genomes_project 9 116526609 116528249 - Sema3f protein_coding retained_intron MGP_CBAJ_T0093856.1 MGP_CBAJ_G0034919.1 mouse_genomes_project 9 116526609 116555116 - MGP_CBAJ_P0093856 Sema3f protein_coding nonsense_mediated_decay MGP_CBAJ_T0093857.1 MGP_CBAJ_G0034919.1 mouse_genomes_project 9 116527478 116530740 - MGP_CBAJ_P0093857 Sema3f protein_coding nonsense_mediated_decay MGP_CBAJ_T0093858.1 MGP_CBAJ_G0034919.1 mouse_genomes_project 9 116527494 116528285 - Sema3f protein_coding retained_intron MGP_CBAJ_T0093859.1 MGP_CBAJ_G0034919.1 mouse_genomes_project 9 116527617 116528259 - Sema3f protein_coding retained_intron MGP_CBAJ_T0093860.1 MGP_CBAJ_G0034919.1 mouse_genomes_project 9 116530697 116536120 - Sema3f protein_coding processed_transcript MGP_CBAJ_T0093861.1 MGP_CBAJ_G0034919.1 mouse_genomes_project 9 116531164 116536048 - MGP_CBAJ_P0093861 Sema3f protein_coding protein_coding MGP_CBAJ_T0093862.1 MGP_CBAJ_G0034919.1 mouse_genomes_project 9 116531178 116533323 - Sema3f protein_coding retained_intron MGP_CBAJ_T0093863.1 MGP_CBAJ_G0034919.1 mouse_genomes_project 9 116531748 116554578 - MGP_CBAJ_P0093863 Sema3f protein_coding protein_coding MGP_CBAJ_T0093864.1 MGP_CBAJ_G0034919.1 mouse_genomes_project 9 116533091 116536109 - MGP_CBAJ_P0093864 Sema3f protein_coding protein_coding MGP_CBAJ_T0099590.1 MGP_CBAJ_G0037845.1 mouse_genomes_project 9 18710141 18710294 + Gm25914 snRNA snRNA MGP_CBAJ_T0005412.1 MGP_CBAJ_G0004569.1 mouse_genomes_project 9 103255341 103257441 - 1700065D16Rik antisense antisense MGP_CBAJ_T0005413.1 MGP_CBAJ_G0004569.1 mouse_genomes_project 9 103255343 103257795 - 1700065D16Rik antisense antisense MGP_CBAJ_T0005414.1 MGP_CBAJ_G0004569.1 mouse_genomes_project 9 103255343 103258246 - 1700065D16Rik antisense antisense MGP_CBAJ_T0005415.1 MGP_CBAJ_G0004569.1 mouse_genomes_project 9 103255344 103257795 - 1700065D16Rik antisense antisense MGP_CBAJ_T0005416.1 MGP_CBAJ_G0004569.1 mouse_genomes_project 9 103255475 103258244 - 1700065D16Rik antisense antisense MGP_CBAJ_T0091537.1 MGP_CBAJ_G0034360.1 mouse_genomes_project 9 45733595 45746460 + MGP_CBAJ_P0091537 Hyou1 protein_coding protein_coding MGP_CBAJ_T0091538.1 MGP_CBAJ_G0034360.1 mouse_genomes_project 9 45733651 45745617 + MGP_CBAJ_P0091538 Hyou1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091539.1 MGP_CBAJ_G0034360.1 mouse_genomes_project 9 45733662 45744830 + Hyou1 protein_coding retained_intron MGP_CBAJ_T0091540.1 MGP_CBAJ_G0034360.1 mouse_genomes_project 9 45733678 45746454 + MGP_CBAJ_P0091540 Hyou1 protein_coding protein_coding MGP_CBAJ_T0091541.1 MGP_CBAJ_G0034360.1 mouse_genomes_project 9 45733689 45740180 + Hyou1 protein_coding retained_intron MGP_CBAJ_T0091542.1 MGP_CBAJ_G0034360.1 mouse_genomes_project 9 45733728 45745196 + MGP_CBAJ_P0091542 Hyou1 protein_coding protein_coding MGP_CBAJ_T0091543.1 MGP_CBAJ_G0034360.1 mouse_genomes_project 9 45734634 45738257 + MGP_CBAJ_P0091543 Hyou1 protein_coding protein_coding MGP_CBAJ_T0091544.1 MGP_CBAJ_G0034360.1 mouse_genomes_project 9 45744754 45745406 + Hyou1 protein_coding retained_intron MGP_CBAJ_T0010920.1 MGP_CBAJ_G0009058.1 mouse_genomes_project 9 19700569 19700661 - Mir7082 miRNA miRNA MGP_CBAJ_T0100909.1 MGP_CBAJ_G0039164.1 mouse_genomes_project 9 116873938 116874066 + Gm24944 snoRNA snoRNA MGP_CBAJ_T0094473.1 MGP_CBAJ_G0035017.1 mouse_genomes_project 9 120551200 120577815 + MGP_CBAJ_P0094473 Lrrc2 protein_coding protein_coding MGP_CBAJ_T0094474.1 MGP_CBAJ_G0035017.1 mouse_genomes_project 9 120553413 120569824 + MGP_CBAJ_P0094474 Lrrc2 protein_coding protein_coding MGP_CBAJ_T0094475.1 MGP_CBAJ_G0035017.1 mouse_genomes_project 9 120560671 120573356 + MGP_CBAJ_P0094475 Lrrc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0002396.1 MGP_CBAJ_G0002308.1 mouse_genomes_project 9 109238556 109240440 + TEC TEC MGP_CBAJ_T0005343.1 MGP_CBAJ_G0004521.1 mouse_genomes_project 9 32325628 32339054 + Gm27201 antisense antisense MGP_CBAJ_T0094412.1 MGP_CBAJ_G0035002.1 mouse_genomes_project 9 120160670 120163988 - MGP_CBAJ_P0094412 Nradd protein_coding protein_coding MGP_CBAJ_T0094413.1 MGP_CBAJ_G0035002.1 mouse_genomes_project 9 120161043 120162858 - MGP_CBAJ_P0094413 Nradd protein_coding protein_coding MGP_CBAJ_T0094414.1 MGP_CBAJ_G0035002.1 mouse_genomes_project 9 120161420 120163914 - MGP_CBAJ_P0094414 Nradd protein_coding protein_coding MGP_CBAJ_T0094415.1 MGP_CBAJ_G0035002.1 mouse_genomes_project 9 120162115 120163967 - Nradd protein_coding retained_intron MGP_CBAJ_T0015826.1 MGP_CBAJ_G0013938.1 mouse_genomes_project 9 76516403 76517112 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0091466.1 MGP_CBAJ_G0034335.1 mouse_genomes_project 9 44105418 44262468 - MGP_CBAJ_P0091466 Arhgef12 protein_coding protein_coding MGP_CBAJ_T0091467.1 MGP_CBAJ_G0034335.1 mouse_genomes_project 9 44105419 44262236 - MGP_CBAJ_P0091467 Arhgef12 protein_coding protein_coding MGP_CBAJ_T0002420.1 MGP_CBAJ_G0002332.1 mouse_genomes_project 9 117104968 117105698 - TEC TEC MGP_CBAJ_T0101197.1 MGP_CBAJ_G0039358.1 mouse_genomes_project 9 116122299 116123188 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101198.1 MGP_CBAJ_G0039358.1 mouse_genomes_project 9 116122874 116126982 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0099628.1 MGP_CBAJ_G0037883.1 mouse_genomes_project 9 88409988 88410085 - Gm24393 snRNA snRNA MGP_CBAJ_T0010910.1 MGP_CBAJ_G0009048.1 mouse_genomes_project 9 5514904 5515000 + Mir1899 miRNA miRNA MGP_CBAJ_T0015843.1 MGP_CBAJ_G0013955.1 mouse_genomes_project 9 81841810 81842186 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009163.1 MGP_CBAJ_G0007353.1 mouse_genomes_project 9 77190887 77207024 - 4930509E16Rik lincRNA lincRNA MGP_CBAJ_T0091007.1 MGP_CBAJ_G0034137.1 mouse_genomes_project 9 21115527 21130140 - MGP_CBAJ_P0091007 Zfp599 protein_coding protein_coding MGP_CBAJ_T0090618.1 MGP_CBAJ_G0033980.1 mouse_genomes_project 9 4692607 4702653 + MGP_CBAJ_P0090618 Mmp8 protein_coding protein_coding MGP_CBAJ_T0093236.1 MGP_CBAJ_G0034799.1 mouse_genomes_project 9 104358901 104428727 - MGP_CBAJ_P0093236 Pxylp1 protein_coding protein_coding MGP_CBAJ_T0093237.1 MGP_CBAJ_G0034799.1 mouse_genomes_project 9 104358909 104428743 - MGP_CBAJ_P0093237 Pxylp1 protein_coding protein_coding MGP_CBAJ_T0093238.1 MGP_CBAJ_G0034799.1 mouse_genomes_project 9 104358909 104428788 - MGP_CBAJ_P0093238 Pxylp1 protein_coding protein_coding MGP_CBAJ_T0093239.1 MGP_CBAJ_G0034799.1 mouse_genomes_project 9 104359151 104428747 - MGP_CBAJ_P0093239 Pxylp1 protein_coding protein_coding MGP_CBAJ_T0093240.1 MGP_CBAJ_G0034799.1 mouse_genomes_project 9 104360981 104428742 - MGP_CBAJ_P0093240 Pxylp1 protein_coding protein_coding MGP_CBAJ_T0093241.1 MGP_CBAJ_G0034799.1 mouse_genomes_project 9 104361152 104402332 - MGP_CBAJ_P0093241 Pxylp1 protein_coding protein_coding MGP_CBAJ_T0093242.1 MGP_CBAJ_G0034799.1 mouse_genomes_project 9 104377288 104394359 - Pxylp1 protein_coding processed_transcript MGP_CBAJ_T0093243.1 MGP_CBAJ_G0034799.1 mouse_genomes_project 9 104377398 104431983 - MGP_CBAJ_P0093243 Pxylp1 protein_coding protein_coding MGP_CBAJ_T0093244.1 MGP_CBAJ_G0034799.1 mouse_genomes_project 9 104378087 104428734 - Pxylp1 protein_coding retained_intron MGP_CBAJ_T0093245.1 MGP_CBAJ_G0034799.1 mouse_genomes_project 9 104378204 104402409 - MGP_CBAJ_P0093245 Pxylp1 protein_coding protein_coding MGP_CBAJ_T0093246.1 MGP_CBAJ_G0034799.1 mouse_genomes_project 9 104395904 104402411 - Pxylp1 protein_coding processed_transcript MGP_CBAJ_T0093247.1 MGP_CBAJ_G0034799.1 mouse_genomes_project 9 104400231 104431404 - Pxylp1 protein_coding processed_transcript MGP_CBAJ_T0093248.1 MGP_CBAJ_G0034799.1 mouse_genomes_project 9 104426944 104428747 - Pxylp1 protein_coding retained_intron MGP_CBAJ_T0015802.1 MGP_CBAJ_G0013914.1 mouse_genomes_project 9 35353107 35353425 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0094883.1 MGP_CBAJ_G0035138.1 mouse_genomes_project 9 135329672 135336651 - MGP_CBAJ_P0094883 Ccr1 protein_coding protein_coding MGP_CBAJ_T0015804.1 MGP_CBAJ_G0013916.1 mouse_genomes_project 9 35678543 35678813 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100908.1 MGP_CBAJ_G0039163.1 mouse_genomes_project 9 115990516 115990646 + Gm23595 snoRNA snoRNA MGP_CBAJ_T0002358.1 MGP_CBAJ_G0002271.1 mouse_genomes_project 9 92081213 92082565 + TEC TEC MGP_CBAJ_T0010970.1 MGP_CBAJ_G0009108.1 mouse_genomes_project 9 117557024 117557109 + Mir425 miRNA miRNA MGP_CBAJ_T0100875.1 MGP_CBAJ_G0039130.1 mouse_genomes_project 9 54513609 54513742 + Gm25562 snoRNA snoRNA MGP_CBAJ_T0091551.1 MGP_CBAJ_G0034366.1 mouse_genomes_project 9 45830766 45832818 - MGP_CBAJ_P0091551 Upk2 protein_coding protein_coding MGP_CBAJ_T0091457.1 MGP_CBAJ_G0034333.1 mouse_genomes_project 9 43510708 43572996 - MGP_CBAJ_P0091457 Tbcel protein_coding protein_coding MGP_CBAJ_T0091458.1 MGP_CBAJ_G0034333.1 mouse_genomes_project 9 43510708 43558442 - MGP_CBAJ_P0091458 Tbcel protein_coding protein_coding MGP_CBAJ_T0091459.1 MGP_CBAJ_G0034333.1 mouse_genomes_project 9 43511810 43562302 - MGP_CBAJ_P0091459 Tbcel protein_coding protein_coding MGP_CBAJ_T0091460.1 MGP_CBAJ_G0034333.1 mouse_genomes_project 9 43512382 43526639 - Tbcel protein_coding processed_transcript MGP_CBAJ_T0091461.1 MGP_CBAJ_G0034333.1 mouse_genomes_project 9 43514067 43573003 - MGP_CBAJ_P0091461 Tbcel protein_coding protein_coding MGP_CBAJ_T0091462.1 MGP_CBAJ_G0034333.1 mouse_genomes_project 9 43514181 43572956 - MGP_CBAJ_P0091462 Tbcel protein_coding protein_coding MGP_CBAJ_T0091463.1 MGP_CBAJ_G0034333.1 mouse_genomes_project 9 43548372 43612242 - MGP_CBAJ_P0091463 Tbcel protein_coding protein_coding MGP_CBAJ_T0090969.1 MGP_CBAJ_G0034119.1 mouse_genomes_project 9 20714147 20724847 - MGP_CBAJ_P0090969 Rab3d protein_coding protein_coding MGP_CBAJ_T0090970.1 MGP_CBAJ_G0034119.1 mouse_genomes_project 9 20714166 20724794 - MGP_CBAJ_P0090970 Rab3d protein_coding protein_coding MGP_CBAJ_T0090971.1 MGP_CBAJ_G0034119.1 mouse_genomes_project 9 20715296 20724772 - MGP_CBAJ_P0090971 Rab3d protein_coding protein_coding MGP_CBAJ_T0090972.1 MGP_CBAJ_G0034119.1 mouse_genomes_project 9 20721546 20724744 - MGP_CBAJ_P0090972 Rab3d protein_coding protein_coding MGP_CBAJ_T0090973.1 MGP_CBAJ_G0034119.1 mouse_genomes_project 9 20722269 20724776 - Rab3d protein_coding retained_intron MGP_CBAJ_T0094771.1 MGP_CBAJ_G0035098.1 mouse_genomes_project 9 132766475 132769015 + MGP_CBAJ_P0094771 Deb1 protein_coding protein_coding MGP_CBAJ_T0092676.1 MGP_CBAJ_G0034678.1 mouse_genomes_project 9 77728905 77759685 + MGP_CBAJ_P0092676 Ccpg1 protein_coding protein_coding MGP_CBAJ_T0092677.1 MGP_CBAJ_G0034678.1 mouse_genomes_project 9 77728980 77745084 + MGP_CBAJ_P0092677 Ccpg1 protein_coding protein_coding MGP_CBAJ_T0092678.1 MGP_CBAJ_G0034678.1 mouse_genomes_project 9 77729054 77757283 + MGP_CBAJ_P0092678 Ccpg1 protein_coding protein_coding MGP_CBAJ_T0092679.1 MGP_CBAJ_G0034678.1 mouse_genomes_project 9 77729062 77731534 + Ccpg1 protein_coding retained_intron MGP_CBAJ_T0092680.1 MGP_CBAJ_G0034678.1 mouse_genomes_project 9 77729081 77759345 + MGP_CBAJ_P0092680 Ccpg1 protein_coding protein_coding MGP_CBAJ_T0092681.1 MGP_CBAJ_G0034678.1 mouse_genomes_project 9 77729081 77759683 + MGP_CBAJ_P0092681 Ccpg1 protein_coding protein_coding MGP_CBAJ_T0092682.1 MGP_CBAJ_G0034678.1 mouse_genomes_project 9 77729084 77745356 + Ccpg1 protein_coding retained_intron MGP_CBAJ_T0092683.1 MGP_CBAJ_G0034678.1 mouse_genomes_project 9 77729095 77757276 + MGP_CBAJ_P0092683 Ccpg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092686.1 MGP_CBAJ_G0034678.1 mouse_genomes_project 9 77753232 77755322 + Ccpg1 protein_coding retained_intron MGP_CBAJ_T0092689.1 MGP_CBAJ_G0034678.1 mouse_genomes_project 9 77758317 77759685 + Ccpg1 protein_coding retained_intron MGP_CBAJ_T0092900.1 MGP_CBAJ_G0034734.1 mouse_genomes_project 9 86039738 86184617 - MGP_CBAJ_P0092900 Impg1 protein_coding protein_coding MGP_CBAJ_T0092901.1 MGP_CBAJ_G0034734.1 mouse_genomes_project 9 86040375 86184660 - MGP_CBAJ_P0092901 Impg1 protein_coding protein_coding MGP_CBAJ_T0092902.1 MGP_CBAJ_G0034734.1 mouse_genomes_project 9 86118677 86184617 - MGP_CBAJ_P0092902 Impg1 protein_coding protein_coding MGP_CBAJ_T0093741.1 MGP_CBAJ_G0034903.1 mouse_genomes_project 9 116236091 116369401 + MGP_CBAJ_P0093741 Cacna2d2 protein_coding protein_coding MGP_CBAJ_T0093742.1 MGP_CBAJ_G0034903.1 mouse_genomes_project 9 116236091 116369401 + MGP_CBAJ_P0093742 Cacna2d2 protein_coding protein_coding MGP_CBAJ_T0093743.1 MGP_CBAJ_G0034903.1 mouse_genomes_project 9 116236359 116369051 + MGP_CBAJ_P0093743 Cacna2d2 protein_coding protein_coding MGP_CBAJ_T0093744.1 MGP_CBAJ_G0034903.1 mouse_genomes_project 9 116236359 116369401 + MGP_CBAJ_P0093744 Cacna2d2 protein_coding protein_coding MGP_CBAJ_T0093745.1 MGP_CBAJ_G0034903.1 mouse_genomes_project 9 116236523 116369401 + MGP_CBAJ_P0093745 Cacna2d2 protein_coding protein_coding MGP_CBAJ_T0093746.1 MGP_CBAJ_G0034903.1 mouse_genomes_project 9 116236548 116367524 + MGP_CBAJ_P0093746 Cacna2d2 protein_coding protein_coding MGP_CBAJ_T0093747.1 MGP_CBAJ_G0034903.1 mouse_genomes_project 9 116262879 116369402 + MGP_CBAJ_P0093747 Cacna2d2 protein_coding unknown_likely_coding MGP_CBAJ_T0093748.1 MGP_CBAJ_G0034903.1 mouse_genomes_project 9 116343923 116351854 + Cacna2d2 protein_coding processed_transcript MGP_CBAJ_T0093749.1 MGP_CBAJ_G0034903.1 mouse_genomes_project 9 116347599 116352216 + Cacna2d2 protein_coding processed_transcript MGP_CBAJ_T0093750.1 MGP_CBAJ_G0034903.1 mouse_genomes_project 9 116361571 116363546 + Cacna2d2 protein_coding retained_intron MGP_CBAJ_T0093751.1 MGP_CBAJ_G0034903.1 mouse_genomes_project 9 116366716 116367627 + Cacna2d2 protein_coding retained_intron MGP_CBAJ_T0092756.1 MGP_CBAJ_G0034695.1 mouse_genomes_project 9 80501829 80567135 - MGP_CBAJ_P0092756 Tmod3 protein_coding protein_coding MGP_CBAJ_T0093391.1 MGP_CBAJ_G0034839.1 mouse_genomes_project 9 110788376 110790385 - Cep63 protein_coding TEC MGP_CBAJ_T0093392.1 MGP_CBAJ_G0034839.1 mouse_genomes_project 9 110790356 110842687 - MGP_CBAJ_P0093392 Cep63 protein_coding protein_coding MGP_CBAJ_T0093393.1 MGP_CBAJ_G0034839.1 mouse_genomes_project 9 110790459 110841324 - MGP_CBAJ_P0093393 Cep63 protein_coding protein_coding MGP_CBAJ_T0093394.1 MGP_CBAJ_G0034839.1 mouse_genomes_project 9 110790465 110790949 - Cep63 protein_coding retained_intron MGP_CBAJ_T0093395.1 MGP_CBAJ_G0034839.1 mouse_genomes_project 9 110794001 110838253 - Cep63 protein_coding retained_intron MGP_CBAJ_T0093396.1 MGP_CBAJ_G0034839.1 mouse_genomes_project 9 110801819 110806353 - Cep63 protein_coding retained_intron MGP_CBAJ_T0093397.1 MGP_CBAJ_G0034839.1 mouse_genomes_project 9 110831602 110842586 - MGP_CBAJ_P0093397 Cep63 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093398.1 MGP_CBAJ_G0034839.1 mouse_genomes_project 9 110835105 110843072 - MGP_CBAJ_P0093398 Cep63 protein_coding protein_coding MGP_CBAJ_T0093399.1 MGP_CBAJ_G0034839.1 mouse_genomes_project 9 110835155 110843072 - MGP_CBAJ_P0093399 Cep63 protein_coding protein_coding MGP_CBAJ_T0002353.1 MGP_CBAJ_G0002266.1 mouse_genomes_project 9 82637742 82638293 + TEC TEC MGP_CBAJ_T0091269.1 MGP_CBAJ_G0034216.1 mouse_genomes_project 9 37593540 37622051 - MGP_CBAJ_P0091269 Slc37a2 protein_coding protein_coding MGP_CBAJ_T0091270.1 MGP_CBAJ_G0034216.1 mouse_genomes_project 9 37594707 37621727 - MGP_CBAJ_P0091270 Slc37a2 protein_coding protein_coding MGP_CBAJ_T0091271.1 MGP_CBAJ_G0034216.1 mouse_genomes_project 9 37594903 37599546 - Slc37a2 protein_coding retained_intron MGP_CBAJ_T0091928.1 MGP_CBAJ_G0034486.1 mouse_genomes_project 9 57431966 57458728 + MGP_CBAJ_P0091928 Hykk protein_coding protein_coding MGP_CBAJ_T0091929.1 MGP_CBAJ_G0034486.1 mouse_genomes_project 9 57431994 57439862 + Hykk protein_coding retained_intron MGP_CBAJ_T0091930.1 MGP_CBAJ_G0034486.1 mouse_genomes_project 9 57431995 57446932 + Hykk protein_coding retained_intron MGP_CBAJ_T0091931.1 MGP_CBAJ_G0034486.1 mouse_genomes_project 9 57432030 57433927 + Hykk protein_coding processed_transcript MGP_CBAJ_T0091900.1 MGP_CBAJ_G0034477.1 mouse_genomes_project 9 56774588 56938651 - MGP_CBAJ_P0091900 Dmxl2 protein_coding protein_coding MGP_CBAJ_T0091901.1 MGP_CBAJ_G0034477.1 mouse_genomes_project 9 56774594 56791418 - Dmxl2 protein_coding retained_intron MGP_CBAJ_T0091902.1 MGP_CBAJ_G0034477.1 mouse_genomes_project 9 56774690 56879492 - MGP_CBAJ_P0091902 Dmxl2 protein_coding protein_coding MGP_CBAJ_T0091903.1 MGP_CBAJ_G0034477.1 mouse_genomes_project 9 56775541 56938521 - MGP_CBAJ_P0091903 Dmxl2 protein_coding protein_coding MGP_CBAJ_T0091904.1 MGP_CBAJ_G0034477.1 mouse_genomes_project 9 56842832 56910864 - MGP_CBAJ_P0091904 Dmxl2 protein_coding protein_coding MGP_CBAJ_T0091905.1 MGP_CBAJ_G0034477.1 mouse_genomes_project 9 56855894 56938596 - Dmxl2 protein_coding retained_intron MGP_CBAJ_T0091906.1 MGP_CBAJ_G0034477.1 mouse_genomes_project 9 56879402 56881073 - Dmxl2 protein_coding processed_transcript MGP_CBAJ_T0091907.1 MGP_CBAJ_G0034477.1 mouse_genomes_project 9 56909390 56938651 - Dmxl2 protein_coding retained_intron MGP_CBAJ_T0091908.1 MGP_CBAJ_G0034477.1 mouse_genomes_project 9 56910551 56938785 - MGP_CBAJ_P0091908 Dmxl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0015877.1 MGP_CBAJ_G0013989.1 mouse_genomes_project 9 97509456 97509748 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0091391.1 MGP_CBAJ_G0034304.1 mouse_genomes_project 9 40570431 40571204 + MGP_CBAJ_P0091391 protein_coding protein_coding MGP_CBAJ_T0002364.1 MGP_CBAJ_G0002276.1 mouse_genomes_project 9 93572124 93573202 - TEC TEC MGP_CBAJ_T0090964.1 MGP_CBAJ_G0034115.1 mouse_genomes_project 9 20528498 20536427 - MGP_CBAJ_P0090964 Spc24 protein_coding protein_coding MGP_CBAJ_T0091847.1 MGP_CBAJ_G0034453.1 mouse_genomes_project 9 53357879 53385494 + MGP_CBAJ_P0091847 Pou2af1 protein_coding protein_coding MGP_CBAJ_T0091058.1 MGP_CBAJ_G0034155.1 mouse_genomes_project 9 26073925 26119058 - MGP_CBAJ_P0091058 Glb1l3 protein_coding protein_coding MGP_CBAJ_T0091654.1 MGP_CBAJ_G0034397.1 mouse_genomes_project 9 47414334 47467905 - MGP_CBAJ_P0091654 Rnf214 protein_coding protein_coding MGP_CBAJ_T0091655.1 MGP_CBAJ_G0034397.1 mouse_genomes_project 9 47414600 47467443 - MGP_CBAJ_P0091655 Rnf214 protein_coding protein_coding MGP_CBAJ_T0091656.1 MGP_CBAJ_G0034397.1 mouse_genomes_project 9 47414600 47467913 - MGP_CBAJ_P0091656 Rnf214 protein_coding protein_coding MGP_CBAJ_T0091657.1 MGP_CBAJ_G0034397.1 mouse_genomes_project 9 47415199 47467409 - Rnf214 protein_coding retained_intron MGP_CBAJ_T0091658.1 MGP_CBAJ_G0034397.1 mouse_genomes_project 9 47415208 47467897 - MGP_CBAJ_P0091658 Rnf214 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091659.1 MGP_CBAJ_G0034397.1 mouse_genomes_project 9 47415743 47467930 - MGP_CBAJ_P0091659 Rnf214 protein_coding protein_coding MGP_CBAJ_T0091660.1 MGP_CBAJ_G0034397.1 mouse_genomes_project 9 47419792 47420399 - Rnf214 protein_coding retained_intron MGP_CBAJ_T0091661.1 MGP_CBAJ_G0034397.1 mouse_genomes_project 9 47422483 47423198 - Rnf214 protein_coding retained_intron MGP_CBAJ_T0091662.1 MGP_CBAJ_G0034397.1 mouse_genomes_project 9 47446376 47454111 - Rnf214 protein_coding retained_intron MGP_CBAJ_T0091663.1 MGP_CBAJ_G0034397.1 mouse_genomes_project 9 47446671 47467423 - MGP_CBAJ_P0091663 Rnf214 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091664.1 MGP_CBAJ_G0034397.1 mouse_genomes_project 9 47451668 47459480 - Rnf214 protein_coding retained_intron MGP_CBAJ_T0093269.1 MGP_CBAJ_G0034807.1 mouse_genomes_project 9 106171751 106197474 + MGP_CBAJ_P0093269 Rbp2 protein_coding protein_coding MGP_CBAJ_T0093270.1 MGP_CBAJ_G0034807.1 mouse_genomes_project 9 106171802 106197345 + MGP_CBAJ_P0093270 Rbp2 protein_coding protein_coding MGP_CBAJ_T0093271.1 MGP_CBAJ_G0034807.1 mouse_genomes_project 9 106176170 106197464 + MGP_CBAJ_P0093271 Rbp2 protein_coding protein_coding MGP_CBAJ_T0093272.1 MGP_CBAJ_G0034807.1 mouse_genomes_project 9 106177330 106184527 + Rbp2 protein_coding processed_transcript MGP_CBAJ_T0094205.1 MGP_CBAJ_G0034967.1 mouse_genomes_project 9 117904830 117905775 + MGP_CBAJ_P0094205 Tmem89 protein_coding protein_coding MGP_CBAJ_T0094206.1 MGP_CBAJ_G0034967.1 mouse_genomes_project 9 117904830 117905775 + MGP_CBAJ_P0094206 Tmem89 protein_coding protein_coding MGP_CBAJ_T0092166.1 MGP_CBAJ_G0034557.1 mouse_genomes_project 9 62753101 62785588 + MGP_CBAJ_P0092166 Parp6 protein_coding protein_coding MGP_CBAJ_T0094493.1 MGP_CBAJ_G0035021.1 mouse_genomes_project 9 120752946 120842327 + MGP_CBAJ_P0094493 Lrrfip2 protein_coding protein_coding MGP_CBAJ_T0094494.1 MGP_CBAJ_G0035021.1 mouse_genomes_project 9 120753465 120872297 + MGP_CBAJ_P0094494 Lrrfip2 protein_coding protein_coding MGP_CBAJ_T0094495.1 MGP_CBAJ_G0035021.1 mouse_genomes_project 9 120753467 120870854 + MGP_CBAJ_P0094495 Lrrfip2 protein_coding protein_coding MGP_CBAJ_T0094496.1 MGP_CBAJ_G0035021.1 mouse_genomes_project 9 120753489 120872297 + MGP_CBAJ_P0094496 Lrrfip2 protein_coding protein_coding MGP_CBAJ_T0094497.1 MGP_CBAJ_G0035021.1 mouse_genomes_project 9 120753556 120872299 + MGP_CBAJ_P0094497 Lrrfip2 protein_coding unknown_likely_coding MGP_CBAJ_T0094498.1 MGP_CBAJ_G0035021.1 mouse_genomes_project 9 120753800 120870854 + MGP_CBAJ_P0094498 Lrrfip2 protein_coding protein_coding MGP_CBAJ_T0094499.1 MGP_CBAJ_G0035021.1 mouse_genomes_project 9 120755022 120870854 + MGP_CBAJ_P0094499 Lrrfip2 protein_coding protein_coding MGP_CBAJ_T0094501.1 MGP_CBAJ_G0035021.1 mouse_genomes_project 9 120827965 120860926 + MGP_CBAJ_P0094501 Lrrfip2 protein_coding protein_coding MGP_CBAJ_T0094502.1 MGP_CBAJ_G0035021.1 mouse_genomes_project 9 120835904 120872297 + Lrrfip2 protein_coding processed_transcript MGP_CBAJ_T0094503.1 MGP_CBAJ_G0035021.1 mouse_genomes_project 9 120842006 120850905 + Lrrfip2 protein_coding retained_intron MGP_CBAJ_T0094504.1 MGP_CBAJ_G0035021.1 mouse_genomes_project 9 120860919 120863169 + Lrrfip2 protein_coding retained_intron MGP_CBAJ_T0094505.1 MGP_CBAJ_G0035021.1 mouse_genomes_project 9 120865803 120870585 + Lrrfip2 protein_coding retained_intron MGP_CBAJ_T0015831.1 MGP_CBAJ_G0013943.1 mouse_genomes_project 9 76928537 76928982 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009165.1 MGP_CBAJ_G0007355.1 mouse_genomes_project 9 77938734 78027713 + Gm27211 lincRNA lincRNA MGP_CBAJ_T0091764.1 MGP_CBAJ_G0034435.1 mouse_genomes_project 9 52661631 52668920 + MGP_CBAJ_P0091764 Il18 protein_coding protein_coding MGP_CBAJ_T0091765.1 MGP_CBAJ_G0034435.1 mouse_genomes_project 9 52661631 52668920 + MGP_CBAJ_P0091765 Il18 protein_coding protein_coding MGP_CBAJ_T0092044.1 MGP_CBAJ_G0034518.1 mouse_genomes_project 9 60232868 60262738 - MGP_CBAJ_P0092044 Ppcdc protein_coding protein_coding MGP_CBAJ_T0091319.1 MGP_CBAJ_G0034244.1 mouse_genomes_project 9 38724147 38725089 + MGP_CBAJ_P0091319 Olfr893 protein_coding protein_coding MGP_CBAJ_T0018282.1 MGP_CBAJ_G0015484.1 mouse_genomes_project 9 77782857 77785912 + 2310009A05Rik processed_transcript antisense MGP_CBAJ_T0018283.1 MGP_CBAJ_G0015484.1 mouse_genomes_project 9 77782869 77785508 + 2310009A05Rik processed_transcript retained_intron MGP_CBAJ_T0093595.1 MGP_CBAJ_G0034875.1 mouse_genomes_project 9 114849724 114866450 + MGP_CBAJ_P0093595 Twf2 protein_coding protein_coding MGP_CBAJ_T0093596.1 MGP_CBAJ_G0034875.1 mouse_genomes_project 9 114849753 114863317 + MGP_CBAJ_P0093596 Twf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093597.1 MGP_CBAJ_G0034875.1 mouse_genomes_project 9 114849761 114863880 + MGP_CBAJ_P0093597 Twf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093598.1 MGP_CBAJ_G0034875.1 mouse_genomes_project 9 114853448 114866448 + MGP_CBAJ_P0093598 Twf2 protein_coding protein_coding MGP_CBAJ_T0093599.1 MGP_CBAJ_G0034875.1 mouse_genomes_project 9 114865288 114866082 + Twf2 protein_coding retained_intron MGP_CBAJ_T0002430.1 MGP_CBAJ_G0002342.1 mouse_genomes_project 9 119875664 119879021 - TEC TEC MGP_CBAJ_T0005446.1 MGP_CBAJ_G0004591.1 mouse_genomes_project 9 115699832 115702121 + 4930524O07Rik antisense antisense MGP_CBAJ_T0005447.1 MGP_CBAJ_G0004591.1 mouse_genomes_project 9 115700456 115702119 + 4930524O07Rik antisense antisense MGP_CBAJ_T0005448.1 MGP_CBAJ_G0004591.1 mouse_genomes_project 9 115700898 115703468 + 4930524O07Rik antisense antisense MGP_CBAJ_T0005470.1 MGP_CBAJ_G0004610.1 mouse_genomes_project 9 124968729 124970887 + Gm9888 antisense antisense MGP_CBAJ_T0094476.1 MGP_CBAJ_G0035018.1 mouse_genomes_project 9 120578675 120583046 - MGP_CBAJ_P0094476 Rtp3 protein_coding protein_coding MGP_CBAJ_T0094477.1 MGP_CBAJ_G0035018.1 mouse_genomes_project 9 120580787 120583919 - MGP_CBAJ_P0094477 Rtp3 protein_coding protein_coding MGP_CBAJ_T0011607.1 MGP_CBAJ_G0009745.1 mouse_genomes_project 9 20433246 20433430 + Gm27373 misc_RNA misc_RNA MGP_CBAJ_T0100883.1 MGP_CBAJ_G0039138.1 mouse_genomes_project 9 68644541 68644683 - Gm24347 snoRNA snoRNA MGP_CBAJ_T0015817.1 MGP_CBAJ_G0013929.1 mouse_genomes_project 9 62580592 62581067 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0092777.1 MGP_CBAJ_G0034703.1 mouse_genomes_project 9 81651609 81742880 - MGP_CBAJ_P0092777 Fam83b protein_coding protein_coding MGP_CBAJ_T0092778.1 MGP_CBAJ_G0034703.1 mouse_genomes_project 9 81652260 81716550 - MGP_CBAJ_P0092778 Fam83b protein_coding protein_coding MGP_CBAJ_T0002433.1 MGP_CBAJ_G0002345.1 mouse_genomes_project 9 120664465 120664878 - TEC TEC MGP_CBAJ_T0091997.1 MGP_CBAJ_G0034505.1 mouse_genomes_project 9 59314942 59388169 - MGP_CBAJ_P0091997 Lingo1 protein_coding protein_coding MGP_CBAJ_T0091998.1 MGP_CBAJ_G0034505.1 mouse_genomes_project 9 59315555 59332097 - MGP_CBAJ_P0091998 Lingo1 protein_coding protein_coding MGP_CBAJ_T0091999.1 MGP_CBAJ_G0034505.1 mouse_genomes_project 9 59315572 59344115 - MGP_CBAJ_P0091999 Lingo1 protein_coding protein_coding MGP_CBAJ_T0091152.1 MGP_CBAJ_G0034184.1 mouse_genomes_project 9 35184015 35240577 - MGP_CBAJ_P0091152 Dcps protein_coding protein_coding MGP_CBAJ_T0091153.1 MGP_CBAJ_G0034184.1 mouse_genomes_project 9 35184019 35240575 - MGP_CBAJ_P0091153 Dcps protein_coding protein_coding MGP_CBAJ_T0091154.1 MGP_CBAJ_G0034184.1 mouse_genomes_project 9 35185914 35240509 - MGP_CBAJ_P0091154 Dcps protein_coding nonsense_mediated_decay MGP_CBAJ_T0002421.1 MGP_CBAJ_G0002333.1 mouse_genomes_project 9 117106501 117107320 - TEC TEC MGP_CBAJ_T0091727.1 MGP_CBAJ_G0034415.1 mouse_genomes_project 9 50304742 50316810 - MGP_CBAJ_P0091727 Rexo2 protein_coding protein_coding MGP_CBAJ_T0092350.1 MGP_CBAJ_G0034603.1 mouse_genomes_project 9 68887559 68930757 + MGP_CBAJ_P0092350 Igdcc4 protein_coding protein_coding MGP_CBAJ_T0092351.1 MGP_CBAJ_G0034603.1 mouse_genomes_project 9 68887608 68928397 + MGP_CBAJ_P0092351 Igdcc4 protein_coding protein_coding MGP_CBAJ_T0091372.1 MGP_CBAJ_G0034291.1 mouse_genomes_project 9 40178715 40188510 - MGP_CBAJ_P0091372 Olfr44 protein_coding protein_coding MGP_CBAJ_T0005369.1 MGP_CBAJ_G0004539.1 mouse_genomes_project 9 58913443 58927593 + Peak1os antisense antisense MGP_CBAJ_T0091615.1 MGP_CBAJ_G0034381.1 mouse_genomes_project 9 46452667 46466790 - MGP_CBAJ_P0091615 Cd3e protein_coding protein_coding MGP_CBAJ_T0090907.1 MGP_CBAJ_G0034099.1 mouse_genomes_project 9 19903400 19908878 - MGP_CBAJ_P0090907 S1pr5 protein_coding protein_coding MGP_CBAJ_T0091356.1 MGP_CBAJ_G0034275.1 mouse_genomes_project 9 39581787 39582569 + MGP_CBAJ_P0091356 Olfr933 protein_coding protein_coding MGP_CBAJ_T0094833.1 MGP_CBAJ_G0035121.1 mouse_genomes_project 9 134234861 134238363 + MGP_CBAJ_P0094833 Tmem42 protein_coding protein_coding MGP_CBAJ_T0098118.1 MGP_CBAJ_G0036391.1 mouse_genomes_project 9 69758294 69758407 + n-R5s85 rRNA rRNA MGP_CBAJ_T0100856.1 MGP_CBAJ_G0039111.1 mouse_genomes_project 9 17852302 17852431 + Gm23048 snoRNA snoRNA MGP_CBAJ_T0094367.1 MGP_CBAJ_G0034994.1 mouse_genomes_project 9 119730253 119746024 + MGP_CBAJ_P0094367 Cspg5 protein_coding protein_coding MGP_CBAJ_T0094368.1 MGP_CBAJ_G0034994.1 mouse_genomes_project 9 119730253 119746025 + MGP_CBAJ_P0094368 Cspg5 protein_coding protein_coding MGP_CBAJ_T0094369.1 MGP_CBAJ_G0034994.1 mouse_genomes_project 9 119731952 119734074 + Cspg5 protein_coding retained_intron MGP_CBAJ_T0094370.1 MGP_CBAJ_G0034994.1 mouse_genomes_project 9 119732000 119746012 + MGP_CBAJ_P0094370 Cspg5 protein_coding protein_coding MGP_CBAJ_T0094371.1 MGP_CBAJ_G0034994.1 mouse_genomes_project 9 119732533 119746024 + MGP_CBAJ_P0094371 Cspg5 protein_coding protein_coding MGP_CBAJ_T0094045.1 MGP_CBAJ_G0034947.1 mouse_genomes_project 9 117360127 117386146 - MGP_CBAJ_P0094045 Ccdc36 protein_coding protein_coding MGP_CBAJ_T0091362.1 MGP_CBAJ_G0034281.1 mouse_genomes_project 9 39698223 39699344 - MGP_CBAJ_P0091362 Olfr938 protein_coding protein_coding MGP_CBAJ_T0090596.1 MGP_CBAJ_G0033971.1 mouse_genomes_project 9 3302106 3303626 - MGP_CBAJ_P0090596 Ddi1 protein_coding protein_coding MGP_CBAJ_T0090649.1 MGP_CBAJ_G0033988.1 mouse_genomes_project 9 5262354 5283326 - MGP_CBAJ_P0090649 9230110C19Rik protein_coding protein_coding MGP_CBAJ_T0009186.1 MGP_CBAJ_G0007373.1 mouse_genomes_project 9 96507236 96542846 + 4930524O08Rik lincRNA lincRNA MGP_CBAJ_T0009187.1 MGP_CBAJ_G0007373.1 mouse_genomes_project 9 96507661 96517825 + 4930524O08Rik lincRNA lincRNA MGP_CBAJ_T0009188.1 MGP_CBAJ_G0007373.1 mouse_genomes_project 9 96507699 96517167 + 4930524O08Rik lincRNA lincRNA MGP_CBAJ_T0018314.1 MGP_CBAJ_G0015496.1 mouse_genomes_project 9 109919987 110013013 - Gm29521 processed_transcript lincRNA MGP_CBAJ_T0018315.1 MGP_CBAJ_G0015496.1 mouse_genomes_project 9 110009844 110013055 - Gm29521 processed_transcript retained_intron MGP_CBAJ_T0099635.1 MGP_CBAJ_G0037890.1 mouse_genomes_project 9 101496735 101496892 + Gm24200 snRNA snRNA MGP_CBAJ_T0101391.1 MGP_CBAJ_G0039454.1 mouse_genomes_project 9 107275526 107290238 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101392.1 MGP_CBAJ_G0039454.1 mouse_genomes_project 9 107289726 107294007 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0100878.1 MGP_CBAJ_G0039133.1 mouse_genomes_project 9 67816818 67816886 + Gm23344 snoRNA snoRNA MGP_CBAJ_T0091894.1 MGP_CBAJ_G0034472.1 mouse_genomes_project 9 56271038 56271518 + MGP_CBAJ_P0091894 Gm16380 protein_coding protein_coding MGP_CBAJ_T0002340.1 MGP_CBAJ_G0002253.1 mouse_genomes_project 9 77424468 77424678 + TEC TEC MGP_CBAJ_T0091212.1 MGP_CBAJ_G0034201.1 mouse_genomes_project 9 35889656 35891717 - MGP_CBAJ_P0091212 D730048I06Rik protein_coding protein_coding MGP_CBAJ_T0094582.1 MGP_CBAJ_G0035035.1 mouse_genomes_project 9 124383045 124383489 + MGP_CBAJ_P0094582 Bcl2a1c protein_coding protein_coding MGP_CBAJ_T0002407.1 MGP_CBAJ_G0002319.1 mouse_genomes_project 9 111756345 111756663 + TEC TEC MGP_CBAJ_T0092757.1 MGP_CBAJ_G0034696.1 mouse_genomes_project 9 80575425 80624257 - MGP_CBAJ_P0092757 Tmod2 protein_coding protein_coding MGP_CBAJ_T0092758.1 MGP_CBAJ_G0034696.1 mouse_genomes_project 9 80575425 80611759 - MGP_CBAJ_P0092758 Tmod2 protein_coding protein_coding MGP_CBAJ_T0092759.1 MGP_CBAJ_G0034696.1 mouse_genomes_project 9 80583510 80610277 - MGP_CBAJ_P0092759 Tmod2 protein_coding protein_coding MGP_CBAJ_T0093279.1 MGP_CBAJ_G0034809.1 mouse_genomes_project 9 106286841 106302546 - MGP_CBAJ_P0093279 Mrps22 protein_coding protein_coding MGP_CBAJ_T0093280.1 MGP_CBAJ_G0034809.1 mouse_genomes_project 9 106296069 106302531 - Mrps22 protein_coding retained_intron MGP_CBAJ_T0090698.1 MGP_CBAJ_G0034004.1 mouse_genomes_project 9 12192474 12221218 - MGP_CBAJ_P0090698 Endod1 protein_coding protein_coding MGP_CBAJ_T0002432.1 MGP_CBAJ_G0002344.1 mouse_genomes_project 9 120486126 120488967 - TEC TEC MGP_CBAJ_T0099618.1 MGP_CBAJ_G0037873.1 mouse_genomes_project 9 72720470 72720577 - Gm22169 snRNA snRNA MGP_CBAJ_T0002369.1 MGP_CBAJ_G0002281.1 mouse_genomes_project 9 95925746 95929629 - TEC TEC MGP_CBAJ_T0093295.1 MGP_CBAJ_G0034818.1 mouse_genomes_project 9 107016346 107024195 - MGP_CBAJ_P0093295 Faiml protein_coding protein_coding MGP_CBAJ_T0093296.1 MGP_CBAJ_G0034818.1 mouse_genomes_project 9 107016438 107023326 - MGP_CBAJ_P0093296 Faiml protein_coding protein_coding MGP_CBAJ_T0091178.1 MGP_CBAJ_G0034188.1 mouse_genomes_project 9 35286165 35339075 - MGP_CBAJ_P0091178 Fam118b protein_coding protein_coding MGP_CBAJ_T0091179.1 MGP_CBAJ_G0034188.1 mouse_genomes_project 9 35286231 35339100 - MGP_CBAJ_P0091179 Fam118b protein_coding protein_coding MGP_CBAJ_T0091180.1 MGP_CBAJ_G0034188.1 mouse_genomes_project 9 35286231 35339072 - MGP_CBAJ_P0091180 Fam118b protein_coding protein_coding MGP_CBAJ_T0091181.1 MGP_CBAJ_G0034188.1 mouse_genomes_project 9 35286446 35304641 - MGP_CBAJ_P0091181 Fam118b protein_coding protein_coding MGP_CBAJ_T0091182.1 MGP_CBAJ_G0034188.1 mouse_genomes_project 9 35290750 35339062 - MGP_CBAJ_P0091182 Fam118b protein_coding protein_coding MGP_CBAJ_T0091183.1 MGP_CBAJ_G0034188.1 mouse_genomes_project 9 35301251 35339075 - Fam118b protein_coding retained_intron MGP_CBAJ_T0091184.1 MGP_CBAJ_G0034188.1 mouse_genomes_project 9 35337618 35339075 - Fam118b protein_coding retained_intron MGP_CBAJ_T0094727.1 MGP_CBAJ_G0035087.1 mouse_genomes_project 9 131408045 131410684 + MGP_CBAJ_P0094727 Eif1b protein_coding protein_coding MGP_CBAJ_T0099616.1 MGP_CBAJ_G0037871.1 mouse_genomes_project 9 71053389 71053487 - Gm24225 snRNA snRNA MGP_CBAJ_T0002311.1 MGP_CBAJ_G0002224.1 mouse_genomes_project 9 32294648 32297679 - TEC TEC MGP_CBAJ_T0005332.1 MGP_CBAJ_G0004515.1 mouse_genomes_project 9 19183306 19197917 + antisense antisense MGP_CBAJ_T0005333.1 MGP_CBAJ_G0004515.1 mouse_genomes_project 9 19183493 19190826 + antisense antisense MGP_CBAJ_T0005334.1 MGP_CBAJ_G0004515.1 mouse_genomes_project 9 19183641 19190831 + antisense antisense MGP_CBAJ_T0005335.1 MGP_CBAJ_G0004515.1 mouse_genomes_project 9 19190562 19191728 + antisense antisense MGP_CBAJ_T0010924.1 MGP_CBAJ_G0009062.1 mouse_genomes_project 9 20962539 20962609 - Mir7084 miRNA miRNA MGP_CBAJ_T0094884.1 MGP_CBAJ_G0035139.1 mouse_genomes_project 9 135344820 135346280 - MGP_CBAJ_P0094884 Ccr1l1 protein_coding protein_coding MGP_CBAJ_T0093778.1 MGP_CBAJ_G0034909.1 mouse_genomes_project 9 116404092 116406950 + MGP_CBAJ_P0093778 Tusc2 protein_coding protein_coding MGP_CBAJ_T0093779.1 MGP_CBAJ_G0034909.1 mouse_genomes_project 9 116404188 116404786 + Tusc2 protein_coding processed_transcript MGP_CBAJ_T0093780.1 MGP_CBAJ_G0034909.1 mouse_genomes_project 9 116404207 116405834 + MGP_CBAJ_P0093780 Tusc2 protein_coding protein_coding MGP_CBAJ_T0091710.1 MGP_CBAJ_G0034410.1 mouse_genomes_project 9 48688171 48694225 + MGP_CBAJ_P0091710 Gm4791 protein_coding protein_coding MGP_CBAJ_T0092363.1 MGP_CBAJ_G0034610.1 mouse_genomes_project 9 69232269 69235238 - MGP_CBAJ_P0092363 Kbtbd13 protein_coding protein_coding MGP_CBAJ_T0100899.1 MGP_CBAJ_G0039154.1 mouse_genomes_project 9 99567420 99567551 - Gm25417 snoRNA snoRNA MGP_CBAJ_T0091404.1 MGP_CBAJ_G0034317.1 mouse_genomes_project 9 40905601 40906717 - MGP_CBAJ_P0091404 Olfr985 protein_coding protein_coding MGP_CBAJ_T0009114.1 MGP_CBAJ_G0007314.1 mouse_genomes_project 9 32681480 32705362 + Gm3331 lincRNA lincRNA MGP_CBAJ_T0098476.1 MGP_CBAJ_G0036736.1 mouse_genomes_project 9 117345659 117346787 + Gm37963 sense_intronic sense_intronic MGP_CBAJ_T0091307.1 MGP_CBAJ_G0034233.1 mouse_genomes_project 9 38369276 38370327 + MGP_CBAJ_P0091307 Olfr145 protein_coding protein_coding MGP_CBAJ_T0094284.1 MGP_CBAJ_G0034983.1 mouse_genomes_project 9 118592994 118728827 - MGP_CBAJ_P0094284 protein_coding protein_coding MGP_CBAJ_T0092128.1 MGP_CBAJ_G0034547.1 mouse_genomes_project 9 61588841 61662606 + MGP_CBAJ_P0092128 Nptn protein_coding protein_coding MGP_CBAJ_T0092129.1 MGP_CBAJ_G0034547.1 mouse_genomes_project 9 61588893 61664166 + MGP_CBAJ_P0092129 Nptn protein_coding protein_coding MGP_CBAJ_T0092130.1 MGP_CBAJ_G0034547.1 mouse_genomes_project 9 61588975 61651964 + MGP_CBAJ_P0092130 Nptn protein_coding non_stop_decay MGP_CBAJ_T0092131.1 MGP_CBAJ_G0034547.1 mouse_genomes_project 9 61589007 61664166 + MGP_CBAJ_P0092131 Nptn protein_coding protein_coding MGP_CBAJ_T0092132.1 MGP_CBAJ_G0034547.1 mouse_genomes_project 9 61589008 61655089 + MGP_CBAJ_P0092132 Nptn protein_coding nonsense_mediated_decay MGP_CBAJ_T0092133.1 MGP_CBAJ_G0034547.1 mouse_genomes_project 9 61589008 61662606 + MGP_CBAJ_P0092133 Nptn protein_coding protein_coding MGP_CBAJ_T0092134.1 MGP_CBAJ_G0034547.1 mouse_genomes_project 9 61589037 61662606 + MGP_CBAJ_P0092134 Nptn protein_coding protein_coding MGP_CBAJ_T0092135.1 MGP_CBAJ_G0034547.1 mouse_genomes_project 9 61589042 61663250 + MGP_CBAJ_P0092135 Nptn protein_coding nonsense_mediated_decay MGP_CBAJ_T0092136.1 MGP_CBAJ_G0034547.1 mouse_genomes_project 9 61589045 61654951 + Nptn protein_coding processed_transcript MGP_CBAJ_T0092137.1 MGP_CBAJ_G0034547.1 mouse_genomes_project 9 61640363 61669256 + MGP_CBAJ_P0092137 Nptn protein_coding nonsense_mediated_decay MGP_CBAJ_T0092138.1 MGP_CBAJ_G0034547.1 mouse_genomes_project 9 61640364 61666492 + MGP_CBAJ_P0092138 Nptn protein_coding protein_coding MGP_CBAJ_T0092139.1 MGP_CBAJ_G0034547.1 mouse_genomes_project 9 61661486 61663345 + Nptn protein_coding retained_intron MGP_CBAJ_T0092140.1 MGP_CBAJ_G0034547.1 mouse_genomes_project 9 61663263 61664106 + Nptn protein_coding processed_transcript MGP_CBAJ_T0015884.1 MGP_CBAJ_G0013996.1 mouse_genomes_project 9 99717549 99718363 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0093865.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116589507 116623715 - MGP_CBAJ_P0093865 Rbm5 protein_coding protein_coding MGP_CBAJ_T0093866.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116589628 116623700 - Rbm5 protein_coding retained_intron MGP_CBAJ_T0093867.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116589629 116610333 - Rbm5 protein_coding retained_intron MGP_CBAJ_T0093868.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116589633 116623699 - MGP_CBAJ_P0093868 Rbm5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093869.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116589633 116623706 - MGP_CBAJ_P0093869 Rbm5 protein_coding protein_coding MGP_CBAJ_T0093870.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116591105 116593426 - MGP_CBAJ_P0093870 Rbm5 protein_coding protein_coding MGP_CBAJ_T0093871.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116592471 116593374 - Rbm5 protein_coding retained_intron MGP_CBAJ_T0093872.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116593408 116599165 - Rbm5 protein_coding retained_intron MGP_CBAJ_T0093873.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116594333 116599054 - Rbm5 protein_coding retained_intron MGP_CBAJ_T0093874.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116595183 116623670 - MGP_CBAJ_P0093874 Rbm5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093875.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116595284 116601037 - MGP_CBAJ_P0093875 Rbm5 protein_coding protein_coding MGP_CBAJ_T0093876.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116599426 116601089 - Rbm5 protein_coding retained_intron MGP_CBAJ_T0093877.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116599633 116603735 - Rbm5 protein_coding retained_intron MGP_CBAJ_T0093878.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116601007 116604455 - Rbm5 protein_coding retained_intron MGP_CBAJ_T0093879.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116601036 116620316 - MGP_CBAJ_P0093879 Rbm5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093880.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116603739 116623691 - MGP_CBAJ_P0093880 Rbm5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093881.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116603743 116607021 - Rbm5 protein_coding retained_intron MGP_CBAJ_T0093882.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116603767 116623214 - MGP_CBAJ_P0093882 Rbm5 protein_coding protein_coding MGP_CBAJ_T0093883.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116608204 116623678 - Rbm5 protein_coding retained_intron MGP_CBAJ_T0093884.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116610088 116623678 - MGP_CBAJ_P0093884 Rbm5 protein_coding protein_coding MGP_CBAJ_T0093885.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116610153 116623664 - MGP_CBAJ_P0093885 Rbm5 protein_coding protein_coding MGP_CBAJ_T0093886.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116614776 116623708 - Rbm5 protein_coding retained_intron MGP_CBAJ_T0093887.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116619125 116623705 - Rbm5 protein_coding retained_intron MGP_CBAJ_T0093888.1 MGP_CBAJ_G0034920.1 mouse_genomes_project 9 116621903 116623678 - Rbm5 protein_coding retained_intron MGP_CBAJ_T0015812.1 MGP_CBAJ_G0013924.1 mouse_genomes_project 9 50967801 50968494 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0093907.1 MGP_CBAJ_G0034923.1 mouse_genomes_project 9 116779481 116796242 + MGP_CBAJ_P0093907 Mst1r protein_coding protein_coding MGP_CBAJ_T0093908.1 MGP_CBAJ_G0034923.1 mouse_genomes_project 9 116779515 116796240 + MGP_CBAJ_P0093908 Mst1r protein_coding nonsense_mediated_decay MGP_CBAJ_T0093909.1 MGP_CBAJ_G0034923.1 mouse_genomes_project 9 116790860 116791586 + Mst1r protein_coding retained_intron MGP_CBAJ_T0093910.1 MGP_CBAJ_G0034923.1 mouse_genomes_project 9 116792081 116792762 + Mst1r protein_coding retained_intron MGP_CBAJ_T0092745.1 MGP_CBAJ_G0034690.1 mouse_genomes_project 9 80190905 80271809 + MGP_CBAJ_P0092745 Myo5c protein_coding unknown_likely_coding MGP_CBAJ_T0092935.1 MGP_CBAJ_G0034740.1 mouse_genomes_project 9 89436771 89479574 - MGP_CBAJ_P0092935 Lca5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092936.1 MGP_CBAJ_G0034740.1 mouse_genomes_project 9 89437862 89496250 - MGP_CBAJ_P0092936 Lca5 protein_coding protein_coding MGP_CBAJ_T0092937.1 MGP_CBAJ_G0034740.1 mouse_genomes_project 9 89439916 89496150 - MGP_CBAJ_P0092937 Lca5 protein_coding protein_coding MGP_CBAJ_T0092938.1 MGP_CBAJ_G0034740.1 mouse_genomes_project 9 89447108 89448339 - Lca5 protein_coding retained_intron MGP_CBAJ_T0092939.1 MGP_CBAJ_G0034740.1 mouse_genomes_project 9 89474664 89496216 - Lca5 protein_coding retained_intron MGP_CBAJ_T0092940.1 MGP_CBAJ_G0034740.1 mouse_genomes_project 9 89475640 89489994 - MGP_CBAJ_P0092940 Lca5 protein_coding protein_coding MGP_CBAJ_T0092941.1 MGP_CBAJ_G0034740.1 mouse_genomes_project 9 89475845 89479582 - Lca5 protein_coding retained_intron MGP_CBAJ_T0092942.1 MGP_CBAJ_G0034740.1 mouse_genomes_project 9 89479361 89496239 - MGP_CBAJ_P0092942 Lca5 protein_coding protein_coding MGP_CBAJ_T0092943.1 MGP_CBAJ_G0034740.1 mouse_genomes_project 9 89479452 89496185 - Lca5 protein_coding processed_transcript MGP_CBAJ_T0005381.1 MGP_CBAJ_G0004546.1 mouse_genomes_project 9 70573222 70585085 + Gm15563 antisense antisense MGP_CBAJ_T0094633.1 MGP_CBAJ_G0035055.1 mouse_genomes_project 9 128667347 128755998 - MGP_CBAJ_P0094633 Cmc1 protein_coding protein_coding MGP_CBAJ_T0093260.1 MGP_CBAJ_G0034803.1 mouse_genomes_project 9 105058302 105684059 - MGP_CBAJ_P0093260 Clstn2 protein_coding protein_coding MGP_CBAJ_T0093261.1 MGP_CBAJ_G0034803.1 mouse_genomes_project 9 105067166 105683861 - MGP_CBAJ_P0093261 Clstn2 protein_coding protein_coding MGP_CBAJ_T0010954.1 MGP_CBAJ_G0009092.1 mouse_genomes_project 9 75317464 75317546 - Gm25149 miRNA miRNA MGP_CBAJ_T0090958.1 MGP_CBAJ_G0034112.1 mouse_genomes_project 9 20339084 20342333 + MGP_CBAJ_P0090958 1810026J23Rik protein_coding protein_coding MGP_CBAJ_T0015902.1 MGP_CBAJ_G0014014.1 mouse_genomes_project 9 108630598 108631590 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0092149.1 MGP_CBAJ_G0034551.1 mouse_genomes_project 9 62337761 62367695 + MGP_CBAJ_P0092149 Adpgk protein_coding protein_coding MGP_CBAJ_T0015824.1 MGP_CBAJ_G0013936.1 mouse_genomes_project 9 75377005 75378181 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0091386.1 MGP_CBAJ_G0034299.1 mouse_genomes_project 9 40382530 40383466 + MGP_CBAJ_P0091386 Olfr963 protein_coding protein_coding MGP_CBAJ_T0092866.1 MGP_CBAJ_G0034729.1 mouse_genomes_project 9 85413952 85422561 - MGP_CBAJ_P0092866 Cox7a2 protein_coding protein_coding MGP_CBAJ_T0093283.1 MGP_CBAJ_G0034812.1 mouse_genomes_project 9 106569285 106570236 + MGP_CBAJ_P0093283 protein_coding protein_coding MGP_CBAJ_T0015866.1 MGP_CBAJ_G0013978.1 mouse_genomes_project 9 93795395 93795873 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0091763.1 MGP_CBAJ_G0034434.1 mouse_genomes_project 9 52636666 52645604 - MGP_CBAJ_P0091763 Tex12 protein_coding protein_coding MGP_CBAJ_T0010912.1 MGP_CBAJ_G0009050.1 mouse_genomes_project 9 7327022 7327113 + Mir6237 miRNA miRNA MGP_CBAJ_T0100915.1 MGP_CBAJ_G0039170.1 mouse_genomes_project 9 123702539 123702656 - Gm25059 snoRNA snoRNA MGP_CBAJ_T0091040.1 MGP_CBAJ_G0034150.1 mouse_genomes_project 9 24242243 24298550 - MGP_CBAJ_P0091040 Herpud2 protein_coding protein_coding MGP_CBAJ_T0094387.1 MGP_CBAJ_G0034997.1 mouse_genomes_project 9 119890300 119913286 - MGP_CBAJ_P0094387 Ptpn23 protein_coding protein_coding MGP_CBAJ_T0094388.1 MGP_CBAJ_G0034997.1 mouse_genomes_project 9 119890542 119891535 - MGP_CBAJ_P0094388 Ptpn23 protein_coding protein_coding MGP_CBAJ_T0094389.1 MGP_CBAJ_G0034997.1 mouse_genomes_project 9 119891058 119891937 - Ptpn23 protein_coding retained_intron MGP_CBAJ_T0094390.1 MGP_CBAJ_G0034997.1 mouse_genomes_project 9 119894508 119895733 - Ptpn23 protein_coding retained_intron MGP_CBAJ_T0093141.1 MGP_CBAJ_G0034781.1 mouse_genomes_project 9 99450769 99485850 + MGP_CBAJ_P0093141 Plscr4 protein_coding protein_coding MGP_CBAJ_T0093142.1 MGP_CBAJ_G0034781.1 mouse_genomes_project 9 99450790 99478736 + Plscr4 protein_coding retained_intron MGP_CBAJ_T0015870.1 MGP_CBAJ_G0013982.1 mouse_genomes_project 9 94617133 94617719 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0094194.1 MGP_CBAJ_G0034966.1 mouse_genomes_project 9 117887945 117888946 + Slc26a6 protein_coding processed_transcript MGP_CBAJ_T0094195.1 MGP_CBAJ_G0034966.1 mouse_genomes_project 9 117888010 117900339 + MGP_CBAJ_P0094195 Slc26a6 protein_coding protein_coding MGP_CBAJ_T0094196.1 MGP_CBAJ_G0034966.1 mouse_genomes_project 9 117888698 117899005 + MGP_CBAJ_P0094196 Slc26a6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094197.1 MGP_CBAJ_G0034966.1 mouse_genomes_project 9 117888698 117902773 + MGP_CBAJ_P0094197 Slc26a6 protein_coding protein_coding MGP_CBAJ_T0094198.1 MGP_CBAJ_G0034966.1 mouse_genomes_project 9 117888704 117900339 + MGP_CBAJ_P0094198 Slc26a6 protein_coding protein_coding MGP_CBAJ_T0094199.1 MGP_CBAJ_G0034966.1 mouse_genomes_project 9 117888735 117900339 + Slc26a6 protein_coding retained_intron MGP_CBAJ_T0094200.1 MGP_CBAJ_G0034966.1 mouse_genomes_project 9 117888755 117900339 + Slc26a6 protein_coding retained_intron MGP_CBAJ_T0094201.1 MGP_CBAJ_G0034966.1 mouse_genomes_project 9 117888796 117900339 + MGP_CBAJ_P0094201 Slc26a6 protein_coding protein_coding MGP_CBAJ_T0094202.1 MGP_CBAJ_G0034966.1 mouse_genomes_project 9 117889260 117902998 + MGP_CBAJ_P0094202 Slc26a6 protein_coding unknown_likely_coding MGP_CBAJ_T0094203.1 MGP_CBAJ_G0034966.1 mouse_genomes_project 9 117893835 117900339 + MGP_CBAJ_P0094203 Slc26a6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094204.1 MGP_CBAJ_G0034966.1 mouse_genomes_project 9 117902624 117903264 + MGP_CBAJ_P0094204 Slc26a6 protein_coding protein_coding MGP_CBAJ_T0099611.1 MGP_CBAJ_G0037866.1 mouse_genomes_project 9 66999496 66999638 + Gm25995 snRNA snRNA MGP_CBAJ_T0015813.1 MGP_CBAJ_G0013925.1 mouse_genomes_project 9 52231997 52233000 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0091002.1 MGP_CBAJ_G0034134.1 mouse_genomes_project 9 21009630 21011143 + MGP_CBAJ_P0091002 Pigyl protein_coding protein_coding MGP_CBAJ_T0091003.1 MGP_CBAJ_G0034134.1 mouse_genomes_project 9 21009730 21011110 + MGP_CBAJ_P0091003 Pigyl protein_coding protein_coding MGP_CBAJ_T0101190.1 MGP_CBAJ_G0039355.1 mouse_genomes_project 9 41319966 41320614 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101191.1 MGP_CBAJ_G0039355.1 mouse_genomes_project 9 41320001 41320583 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0091098.1 MGP_CBAJ_G0034167.1 mouse_genomes_project 9 29981452 30022764 + MGP_CBAJ_P0091098 Snx19 protein_coding protein_coding MGP_CBAJ_T0093164.1 MGP_CBAJ_G0034788.1 mouse_genomes_project 9 102996601 103067963 + MGP_CBAJ_P0093164 Pcolce2 protein_coding protein_coding MGP_CBAJ_T0093165.1 MGP_CBAJ_G0034788.1 mouse_genomes_project 9 103047940 103064549 + Pcolce2 protein_coding processed_transcript MGP_CBAJ_T0099596.1 MGP_CBAJ_G0037851.1 mouse_genomes_project 9 35549941 35550104 + Gm25630 snRNA snRNA MGP_CBAJ_T0101192.1 MGP_CBAJ_G0039356.1 mouse_genomes_project 9 61147190 61153097 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101193.1 MGP_CBAJ_G0039356.1 mouse_genomes_project 9 61152326 61152843 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0005382.1 MGP_CBAJ_G0004547.1 mouse_genomes_project 9 70834773 70838955 - BC050972 antisense antisense MGP_CBAJ_T0005383.1 MGP_CBAJ_G0004547.1 mouse_genomes_project 9 70835006 70838655 - BC050972 antisense antisense MGP_CBAJ_T0005384.1 MGP_CBAJ_G0004547.1 mouse_genomes_project 9 70835035 70840455 - BC050972 antisense antisense MGP_CBAJ_T0009176.1 MGP_CBAJ_G0007365.1 mouse_genomes_project 9 86979616 87008171 + Gm26713 lincRNA lincRNA MGP_CBAJ_T0015910.1 MGP_CBAJ_G0014022.1 mouse_genomes_project 9 111715251 111715628 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0092257.1 MGP_CBAJ_G0034576.1 mouse_genomes_project 9 66131553 66261742 + MGP_CBAJ_P0092257 Itga11 protein_coding protein_coding MGP_CBAJ_T0092258.1 MGP_CBAJ_G0034576.1 mouse_genomes_project 9 66131587 66254883 + Itga11 protein_coding retained_intron MGP_CBAJ_T0092731.1 MGP_CBAJ_G0034689.1 mouse_genomes_project 9 80013384 80065543 + Myo5a protein_coding retained_intron MGP_CBAJ_T0092732.1 MGP_CBAJ_G0034689.1 mouse_genomes_project 9 80013563 80180121 + MGP_CBAJ_P0092732 Myo5a protein_coding protein_coding MGP_CBAJ_T0092733.1 MGP_CBAJ_G0034689.1 mouse_genomes_project 9 80013581 80081485 + Myo5a protein_coding retained_intron MGP_CBAJ_T0092734.1 MGP_CBAJ_G0034689.1 mouse_genomes_project 9 80013761 80174975 + MGP_CBAJ_P0092734 Myo5a protein_coding protein_coding MGP_CBAJ_T0092735.1 MGP_CBAJ_G0034689.1 mouse_genomes_project 9 80013940 80130532 + MGP_CBAJ_P0092735 Myo5a protein_coding nonsense_mediated_decay MGP_CBAJ_T0092736.1 MGP_CBAJ_G0034689.1 mouse_genomes_project 9 80013975 80175378 + MGP_CBAJ_P0092736 Myo5a protein_coding protein_coding MGP_CBAJ_T0092737.1 MGP_CBAJ_G0034689.1 mouse_genomes_project 9 80092465 80099088 + Myo5a protein_coding retained_intron MGP_CBAJ_T0092738.1 MGP_CBAJ_G0034689.1 mouse_genomes_project 9 80138159 80174909 + Myo5a protein_coding processed_transcript MGP_CBAJ_T0092739.1 MGP_CBAJ_G0034689.1 mouse_genomes_project 9 80138222 80150525 + Myo5a protein_coding retained_intron MGP_CBAJ_T0092740.1 MGP_CBAJ_G0034689.1 mouse_genomes_project 9 80139871 80152625 + MGP_CBAJ_P0092740 Myo5a protein_coding protein_coding MGP_CBAJ_T0092741.1 MGP_CBAJ_G0034689.1 mouse_genomes_project 9 80139970 80174418 + MGP_CBAJ_P0092741 Myo5a protein_coding protein_coding MGP_CBAJ_T0092742.1 MGP_CBAJ_G0034689.1 mouse_genomes_project 9 80139972 80157744 + MGP_CBAJ_P0092742 Myo5a protein_coding protein_coding MGP_CBAJ_T0092743.1 MGP_CBAJ_G0034689.1 mouse_genomes_project 9 80146365 80149419 + Myo5a protein_coding retained_intron MGP_CBAJ_T0092744.1 MGP_CBAJ_G0034689.1 mouse_genomes_project 9 80150197 80160177 + Myo5a protein_coding retained_intron MGP_CBAJ_T0002394.1 MGP_CBAJ_G0002306.1 mouse_genomes_project 9 109195459 109197499 + TEC TEC MGP_CBAJ_T0094858.1 MGP_CBAJ_G0035129.1 mouse_genomes_project 9 134759899 134808385 + MGP_CBAJ_P0094858 Limd1 protein_coding protein_coding MGP_CBAJ_T0091736.1 MGP_CBAJ_G0034420.1 mouse_genomes_project 9 50795192 50807075 - MGP_CBAJ_P0091736 Htr3a protein_coding protein_coding MGP_CBAJ_T0091737.1 MGP_CBAJ_G0034420.1 mouse_genomes_project 9 50795669 50806941 - MGP_CBAJ_P0091737 Htr3a protein_coding unknown_likely_coding MGP_CBAJ_T0092416.1 MGP_CBAJ_G0034624.1 mouse_genomes_project 9 70001740 70007949 + MGP_CBAJ_P0092416 Ppib protein_coding protein_coding MGP_CBAJ_T0093111.1 MGP_CBAJ_G0034774.1 mouse_genomes_project 9 96944460 97018831 - MGP_CBAJ_P0093111 Tbc1d2b protein_coding protein_coding MGP_CBAJ_T0093112.1 MGP_CBAJ_G0034774.1 mouse_genomes_project 9 96972028 97018866 - MGP_CBAJ_P0093112 Tbc1d2b protein_coding nonsense_mediated_decay MGP_CBAJ_T0093113.1 MGP_CBAJ_G0034774.1 mouse_genomes_project 9 96983370 97018833 - MGP_CBAJ_P0093113 Tbc1d2b protein_coding protein_coding MGP_CBAJ_T0093114.1 MGP_CBAJ_G0034774.1 mouse_genomes_project 9 96986244 97001025 - Tbc1d2b protein_coding processed_transcript MGP_CBAJ_T0092808.1 MGP_CBAJ_G0034709.1 mouse_genomes_project 9 83236905 83320909 + MGP_CBAJ_P0092808 Elovl5 protein_coding protein_coding MGP_CBAJ_T0092809.1 MGP_CBAJ_G0034709.1 mouse_genomes_project 9 83236975 83292242 + Elovl5 protein_coding retained_intron MGP_CBAJ_T0092810.1 MGP_CBAJ_G0034709.1 mouse_genomes_project 9 83245605 83316257 + MGP_CBAJ_P0092810 Elovl5 protein_coding protein_coding MGP_CBAJ_T0092811.1 MGP_CBAJ_G0034709.1 mouse_genomes_project 9 83267950 83295528 + MGP_CBAJ_P0092811 Elovl5 protein_coding protein_coding MGP_CBAJ_T0093917.1 MGP_CBAJ_G0034926.1 mouse_genomes_project 9 116831780 116858160 + Traip protein_coding retained_intron MGP_CBAJ_T0093918.1 MGP_CBAJ_G0034926.1 mouse_genomes_project 9 116832595 116858905 + MGP_CBAJ_P0093918 Traip protein_coding protein_coding MGP_CBAJ_T0093919.1 MGP_CBAJ_G0034926.1 mouse_genomes_project 9 116832606 116845079 + Traip protein_coding processed_transcript MGP_CBAJ_T0093920.1 MGP_CBAJ_G0034926.1 mouse_genomes_project 9 116832627 116847638 + MGP_CBAJ_P0093920 Traip protein_coding protein_coding MGP_CBAJ_T0093921.1 MGP_CBAJ_G0034926.1 mouse_genomes_project 9 116846983 116848254 + Traip protein_coding processed_transcript MGP_CBAJ_T0093922.1 MGP_CBAJ_G0034926.1 mouse_genomes_project 9 116848764 116855284 + Traip protein_coding retained_intron MGP_CBAJ_T0093923.1 MGP_CBAJ_G0034926.1 mouse_genomes_project 9 116848825 116855381 + Traip protein_coding retained_intron MGP_CBAJ_T0010916.1 MGP_CBAJ_G0009054.1 mouse_genomes_project 9 16379977 16380088 - Gm44498 miRNA miRNA MGP_CBAJ_T0094634.1 MGP_CBAJ_G0035056.1 mouse_genomes_project 9 129144605 129151760 + MGP_CBAJ_P0094634 Eomes protein_coding protein_coding MGP_CBAJ_T0094635.1 MGP_CBAJ_G0035056.1 mouse_genomes_project 9 129144737 129152526 + MGP_CBAJ_P0094635 Eomes protein_coding protein_coding MGP_CBAJ_T0094636.1 MGP_CBAJ_G0035056.1 mouse_genomes_project 9 129145254 129149151 + MGP_CBAJ_P0094636 Eomes protein_coding protein_coding MGP_CBAJ_T0009213.1 MGP_CBAJ_G0007393.1 mouse_genomes_project 9 109442765 109448631 + Gm28979 lincRNA lincRNA MGP_CBAJ_T0009121.1 MGP_CBAJ_G0007321.1 mouse_genomes_project 9 36096086 36105048 - Gm27187 lincRNA lincRNA MGP_CBAJ_T0009122.1 MGP_CBAJ_G0007321.1 mouse_genomes_project 9 36096133 36105163 - Gm27187 lincRNA lincRNA MGP_CBAJ_T0005482.1 MGP_CBAJ_G0004618.1 mouse_genomes_project 9 134928045 134929983 + Gm17120 antisense antisense MGP_CBAJ_T0009117.1 MGP_CBAJ_G0007317.1 mouse_genomes_project 9 33959073 33975173 + lincRNA lincRNA MGP_CBAJ_T0093425.1 MGP_CBAJ_G0034844.1 mouse_genomes_project 9 111247746 111279716 + Slco2a1 protein_coding processed_transcript MGP_CBAJ_T0093426.1 MGP_CBAJ_G0034844.1 mouse_genomes_project 9 111266950 111357832 + MGP_CBAJ_P0093426 Slco2a1 protein_coding protein_coding MGP_CBAJ_T0093427.1 MGP_CBAJ_G0034844.1 mouse_genomes_project 9 111267102 111270848 + Slco2a1 protein_coding retained_intron MGP_CBAJ_T0093428.1 MGP_CBAJ_G0034844.1 mouse_genomes_project 9 111267447 111363260 + MGP_CBAJ_P0093428 Slco2a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0098471.1 MGP_CBAJ_G0036731.1 mouse_genomes_project 9 29052423 29054449 - Gm15521 sense_intronic sense_intronic MGP_CBAJ_T0015799.1 MGP_CBAJ_G0013911.1 mouse_genomes_project 9 32468445 32468863 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0094747.1 MGP_CBAJ_G0035092.1 mouse_genomes_project 9 131923635 132079264 - Ulk4 protein_coding processed_transcript MGP_CBAJ_T0094748.1 MGP_CBAJ_G0035092.1 mouse_genomes_project 9 131927821 132003889 - Ulk4 protein_coding retained_intron MGP_CBAJ_T0094749.1 MGP_CBAJ_G0035092.1 mouse_genomes_project 9 131927821 132264096 - MGP_CBAJ_P0094749 Ulk4 protein_coding protein_coding MGP_CBAJ_T0094750.1 MGP_CBAJ_G0035092.1 mouse_genomes_project 9 131929771 132264069 - MGP_CBAJ_P0094750 Ulk4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094751.1 MGP_CBAJ_G0035092.1 mouse_genomes_project 9 132040487 132264080 - MGP_CBAJ_P0094751 Ulk4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094752.1 MGP_CBAJ_G0035092.1 mouse_genomes_project 9 132040491 132264071 - MGP_CBAJ_P0094752 Ulk4 protein_coding protein_coding MGP_CBAJ_T0094753.1 MGP_CBAJ_G0035092.1 mouse_genomes_project 9 132073621 132264096 - Ulk4 protein_coding retained_intron MGP_CBAJ_T0094754.1 MGP_CBAJ_G0035092.1 mouse_genomes_project 9 132131378 132230765 - MGP_CBAJ_P0094754 Ulk4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094755.1 MGP_CBAJ_G0035092.1 mouse_genomes_project 9 132134735 132166252 - Ulk4 protein_coding processed_transcript MGP_CBAJ_T0098122.1 MGP_CBAJ_G0036395.1 mouse_genomes_project 9 104052303 104052419 - n-R5s87 rRNA rRNA MGP_CBAJ_T0018333.1 MGP_CBAJ_G0015504.1 mouse_genomes_project 9 133534167 133552944 - A730085K08Rik processed_transcript processed_transcript MGP_CBAJ_T0002363.1 MGP_CBAJ_G0002275.1 mouse_genomes_project 9 93158875 93161184 - TEC TEC MGP_CBAJ_T0092354.1 MGP_CBAJ_G0034605.1 mouse_genomes_project 9 69022232 69053475 + MGP_CBAJ_P0092354 Parp16 protein_coding protein_coding MGP_CBAJ_T0005432.1 MGP_CBAJ_G0004579.1 mouse_genomes_project 9 107082570 107088241 - 4930422M22Rik antisense antisense MGP_CBAJ_T0093334.1 MGP_CBAJ_G0034826.1 mouse_genomes_project 9 107537013 107562407 - MGP_CBAJ_P0093334 Cldn18 protein_coding protein_coding MGP_CBAJ_T0093335.1 MGP_CBAJ_G0034826.1 mouse_genomes_project 9 107539364 107569607 - MGP_CBAJ_P0093335 Cldn18 protein_coding protein_coding MGP_CBAJ_T0093336.1 MGP_CBAJ_G0034826.1 mouse_genomes_project 9 107539726 107562353 - MGP_CBAJ_P0093336 Cldn18 protein_coding protein_coding MGP_CBAJ_T0093337.1 MGP_CBAJ_G0034826.1 mouse_genomes_project 9 107540266 107569607 - MGP_CBAJ_P0093337 Cldn18 protein_coding protein_coding MGP_CBAJ_T0090984.1 MGP_CBAJ_G0034126.1 mouse_genomes_project 9 20810244 20826598 - MGP_CBAJ_P0090984 Ccdc151 protein_coding protein_coding MGP_CBAJ_T0090985.1 MGP_CBAJ_G0034126.1 mouse_genomes_project 9 20810244 20826598 - MGP_CBAJ_P0090985 Ccdc151 protein_coding protein_coding MGP_CBAJ_T0091688.1 MGP_CBAJ_G0034403.1 mouse_genomes_project 9 47824678 47826577 + MGP_CBAJ_P0091688 Apoa1 protein_coding protein_coding MGP_CBAJ_T0091689.1 MGP_CBAJ_G0034403.1 mouse_genomes_project 9 47824819 47826084 + Apoa1 protein_coding retained_intron MGP_CBAJ_T0093405.1 MGP_CBAJ_G0034841.1 mouse_genomes_project 9 110943764 110947811 + MGP_CBAJ_P0093405 Amotl2 protein_coding protein_coding MGP_CBAJ_T0093406.1 MGP_CBAJ_G0034841.1 mouse_genomes_project 9 110943894 110960503 + MGP_CBAJ_P0093406 Amotl2 protein_coding protein_coding MGP_CBAJ_T0093407.1 MGP_CBAJ_G0034841.1 mouse_genomes_project 9 110944381 110947823 + MGP_CBAJ_P0093407 Amotl2 protein_coding protein_coding MGP_CBAJ_T0093408.1 MGP_CBAJ_G0034841.1 mouse_genomes_project 9 110944760 110960508 + MGP_CBAJ_P0093408 Amotl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093409.1 MGP_CBAJ_G0034841.1 mouse_genomes_project 9 110945521 110947482 + MGP_CBAJ_P0093409 Amotl2 protein_coding protein_coding MGP_CBAJ_T0093410.1 MGP_CBAJ_G0034841.1 mouse_genomes_project 9 110945562 110947490 + MGP_CBAJ_P0093410 Amotl2 protein_coding protein_coding MGP_CBAJ_T0093411.1 MGP_CBAJ_G0034841.1 mouse_genomes_project 9 110945577 110947302 + MGP_CBAJ_P0093411 Amotl2 protein_coding protein_coding MGP_CBAJ_T0093412.1 MGP_CBAJ_G0034841.1 mouse_genomes_project 9 110945594 110960511 + MGP_CBAJ_P0093412 Amotl2 protein_coding protein_coding MGP_CBAJ_T0093413.1 MGP_CBAJ_G0034841.1 mouse_genomes_project 9 110945660 110955593 + MGP_CBAJ_P0093413 Amotl2 protein_coding protein_coding MGP_CBAJ_T0093414.1 MGP_CBAJ_G0034841.1 mouse_genomes_project 9 110949405 110955416 + Amotl2 protein_coding processed_transcript MGP_CBAJ_T0093415.1 MGP_CBAJ_G0034841.1 mouse_genomes_project 9 110949623 110960508 + Amotl2 protein_coding retained_intron MGP_CBAJ_T0093416.1 MGP_CBAJ_G0034841.1 mouse_genomes_project 9 110955420 110959431 + Amotl2 protein_coding processed_transcript MGP_CBAJ_T0093417.1 MGP_CBAJ_G0034841.1 mouse_genomes_project 9 110957820 110959417 + Amotl2 protein_coding retained_intron MGP_CBAJ_T0092492.1 MGP_CBAJ_G0034641.1 mouse_genomes_project 9 71910368 71911862 + MGP_CBAJ_P0092492 C2cd4b protein_coding protein_coding MGP_CBAJ_T0090767.1 MGP_CBAJ_G0034029.1 mouse_genomes_project 9 16589352 16672982 - MGP_CBAJ_P0090767 Naalad2 protein_coding protein_coding MGP_CBAJ_T0090768.1 MGP_CBAJ_G0034029.1 mouse_genomes_project 9 16590421 16661472 - MGP_CBAJ_P0090768 Naalad2 protein_coding protein_coding MGP_CBAJ_T0090769.1 MGP_CBAJ_G0034029.1 mouse_genomes_project 9 16590422 16667202 - MGP_CBAJ_P0090769 Naalad2 protein_coding protein_coding MGP_CBAJ_T0090770.1 MGP_CBAJ_G0034029.1 mouse_genomes_project 9 16656234 16661358 - Naalad2 protein_coding retained_intron MGP_CBAJ_T0090771.1 MGP_CBAJ_G0034029.1 mouse_genomes_project 9 16660493 16683285 - MGP_CBAJ_P0090771 Naalad2 protein_coding protein_coding MGP_CBAJ_T0090772.1 MGP_CBAJ_G0034029.1 mouse_genomes_project 9 16661264 16683287 - MGP_CBAJ_P0090772 Naalad2 protein_coding protein_coding MGP_CBAJ_T0090773.1 MGP_CBAJ_G0034029.1 mouse_genomes_project 9 16663509 16683308 - MGP_CBAJ_P0090773 Naalad2 protein_coding protein_coding MGP_CBAJ_T0090774.1 MGP_CBAJ_G0034029.1 mouse_genomes_project 9 16663615 16683289 - Naalad2 protein_coding processed_transcript MGP_CBAJ_T0015922.1 MGP_CBAJ_G0014034.1 mouse_genomes_project 9 118740905 118742127 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0090697.1 MGP_CBAJ_G0034003.1 mouse_genomes_project 9 12109310 12160361 + MGP_CBAJ_P0090697 Sesn3 protein_coding protein_coding MGP_CBAJ_T0091349.1 MGP_CBAJ_G0034268.1 mouse_genomes_project 9 39332674 39336737 + MGP_CBAJ_P0091349 Olfr920 protein_coding protein_coding MGP_CBAJ_T0015868.1 MGP_CBAJ_G0013980.1 mouse_genomes_project 9 94503935 94504539 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0090806.1 MGP_CBAJ_G0034056.1 mouse_genomes_project 9 18049387 18072061 + MGP_CBAJ_P0090806 Zfp317 protein_coding unknown_likely_coding MGP_CBAJ_T0011621.1 MGP_CBAJ_G0009759.1 mouse_genomes_project 9 120891268 120891544 - Gm24860 misc_RNA misc_RNA MGP_CBAJ_T0093911.1 MGP_CBAJ_G0034924.1 mouse_genomes_project 9 116806776 116810775 + MGP_CBAJ_P0093911 Actl11 protein_coding protein_coding MGP_CBAJ_T0010932.1 MGP_CBAJ_G0009070.1 mouse_genomes_project 9 44000228 44000307 - Gm27509 miRNA miRNA MGP_CBAJ_T0090844.1 MGP_CBAJ_G0034076.1 mouse_genomes_project 9 19198769 19219572 - MGP_CBAJ_P0090844 Fbxl12 protein_coding protein_coding MGP_CBAJ_T0090845.1 MGP_CBAJ_G0034076.1 mouse_genomes_project 9 19198881 19222006 - Fbxl12 protein_coding processed_transcript MGP_CBAJ_T0090846.1 MGP_CBAJ_G0034076.1 mouse_genomes_project 9 19215061 19222018 - MGP_CBAJ_P0090846 Fbxl12 protein_coding protein_coding MGP_CBAJ_T0090847.1 MGP_CBAJ_G0034076.1 mouse_genomes_project 9 19215098 19216653 - MGP_CBAJ_P0090847 Fbxl12 protein_coding protein_coding MGP_CBAJ_T0090848.1 MGP_CBAJ_G0034076.1 mouse_genomes_project 9 19215098 19222006 - MGP_CBAJ_P0090848 Fbxl12 protein_coding protein_coding MGP_CBAJ_T0090849.1 MGP_CBAJ_G0034076.1 mouse_genomes_project 9 19215099 19222018 - MGP_CBAJ_P0090849 Fbxl12 protein_coding protein_coding MGP_CBAJ_T0090850.1 MGP_CBAJ_G0034076.1 mouse_genomes_project 9 19215101 19222030 - MGP_CBAJ_P0090850 Fbxl12 protein_coding protein_coding MGP_CBAJ_T0090851.1 MGP_CBAJ_G0034076.1 mouse_genomes_project 9 19215101 19220065 - MGP_CBAJ_P0090851 Fbxl12 protein_coding protein_coding MGP_CBAJ_T0090852.1 MGP_CBAJ_G0034076.1 mouse_genomes_project 9 19216113 19222021 - MGP_CBAJ_P0090852 Fbxl12 protein_coding protein_coding MGP_CBAJ_T0090853.1 MGP_CBAJ_G0034076.1 mouse_genomes_project 9 19218821 19222001 - Fbxl12 protein_coding retained_intron MGP_CBAJ_T0093652.1 MGP_CBAJ_G0034884.1 mouse_genomes_project 9 115192921 115194898 - MGP_CBAJ_P0093652 Gpr62 protein_coding protein_coding MGP_CBAJ_T0092056.1 MGP_CBAJ_G0034526.1 mouse_genomes_project 9 60434981 60441244 - MGP_CBAJ_P0092056 Cplx3 protein_coding protein_coding MGP_CBAJ_T0002386.1 MGP_CBAJ_G0002298.1 mouse_genomes_project 9 107031126 107032881 - TEC TEC MGP_CBAJ_T0099585.1 MGP_CBAJ_G0037840.1 mouse_genomes_project 9 3781881 3781986 - Gm23097 snRNA snRNA MGP_CBAJ_T0092550.1 MGP_CBAJ_G0034655.1 mouse_genomes_project 9 74894014 74943259 - MGP_CBAJ_P0092550 Rnf111 protein_coding unknown_likely_coding MGP_CBAJ_T0092551.1 MGP_CBAJ_G0034655.1 mouse_genomes_project 9 74894021 74973104 - MGP_CBAJ_P0092551 Rnf111 protein_coding protein_coding MGP_CBAJ_T0092552.1 MGP_CBAJ_G0034655.1 mouse_genomes_project 9 74894022 74972734 - MGP_CBAJ_P0092552 Rnf111 protein_coding protein_coding MGP_CBAJ_T0090884.1 MGP_CBAJ_G0034086.1 mouse_genomes_project 9 19514632 19563382 - MGP_CBAJ_P0090884 Dnmt1 protein_coding protein_coding MGP_CBAJ_T0094207.1 MGP_CBAJ_G0034968.1 mouse_genomes_project 9 117929244 117941324 + MGP_CBAJ_P0094207 Uqcrc1 protein_coding protein_coding MGP_CBAJ_T0094208.1 MGP_CBAJ_G0034968.1 mouse_genomes_project 9 117929325 117936671 + MGP_CBAJ_P0094208 Uqcrc1 protein_coding protein_coding MGP_CBAJ_T0094209.1 MGP_CBAJ_G0034968.1 mouse_genomes_project 9 117929326 117936487 + MGP_CBAJ_P0094209 Uqcrc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094210.1 MGP_CBAJ_G0034968.1 mouse_genomes_project 9 117929503 117936206 + Uqcrc1 protein_coding retained_intron MGP_CBAJ_T0094211.1 MGP_CBAJ_G0034968.1 mouse_genomes_project 9 117934502 117936793 + MGP_CBAJ_P0094211 Uqcrc1 protein_coding protein_coding MGP_CBAJ_T0094212.1 MGP_CBAJ_G0034968.1 mouse_genomes_project 9 117937923 117941320 + Uqcrc1 protein_coding retained_intron MGP_CBAJ_T0094213.1 MGP_CBAJ_G0034968.1 mouse_genomes_project 9 117939120 117941241 + MGP_CBAJ_P0094213 Uqcrc1 protein_coding protein_coding MGP_CBAJ_T0094214.1 MGP_CBAJ_G0034968.1 mouse_genomes_project 9 117940023 117940824 + Uqcrc1 protein_coding retained_intron MGP_CBAJ_T0009142.1 MGP_CBAJ_G0007337.1 mouse_genomes_project 9 59966795 59977522 + 1700041C23Rik lincRNA lincRNA MGP_CBAJ_T0015927.1 MGP_CBAJ_G0014039.1 mouse_genomes_project 9 127532377 127532739 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0090706.1 MGP_CBAJ_G0034008.1 mouse_genomes_project 9 12596716 12607549 - MGP_CBAJ_P0090706 Piwil4 protein_coding protein_coding MGP_CBAJ_T0090707.1 MGP_CBAJ_G0034008.1 mouse_genomes_project 9 12604256 12643153 - MGP_CBAJ_P0090707 Piwil4 protein_coding protein_coding MGP_CBAJ_T0090708.1 MGP_CBAJ_G0034008.1 mouse_genomes_project 9 12604257 12620919 - MGP_CBAJ_P0090708 Piwil4 protein_coding protein_coding MGP_CBAJ_T0090709.1 MGP_CBAJ_G0034008.1 mouse_genomes_project 9 12604836 12643165 - MGP_CBAJ_P0090709 Piwil4 protein_coding protein_coding MGP_CBAJ_T0005392.1 MGP_CBAJ_G0004554.1 mouse_genomes_project 9 77305552 77308626 - Gm27241 antisense antisense MGP_CBAJ_T0005393.1 MGP_CBAJ_G0004554.1 mouse_genomes_project 9 77305686 77308798 - Gm27241 antisense antisense MGP_CBAJ_T0091292.1 MGP_CBAJ_G0034223.1 mouse_genomes_project 9 37936657 37941576 + MGP_CBAJ_P0091292 Vsig2 protein_coding protein_coding MGP_CBAJ_T0093792.1 MGP_CBAJ_G0034912.1 mouse_genomes_project 9 116419754 116424377 + MGP_CBAJ_P0093792 Nat6 protein_coding protein_coding MGP_CBAJ_T0093793.1 MGP_CBAJ_G0034912.1 mouse_genomes_project 9 116419754 116424377 + MGP_CBAJ_P0093793 Nat6 protein_coding protein_coding MGP_CBAJ_T0093794.1 MGP_CBAJ_G0034912.1 mouse_genomes_project 9 116419754 116424377 + MGP_CBAJ_P0093794 Nat6 protein_coding protein_coding MGP_CBAJ_T0093795.1 MGP_CBAJ_G0034912.1 mouse_genomes_project 9 116419754 116424377 + MGP_CBAJ_P0093795 Nat6 protein_coding protein_coding MGP_CBAJ_T0093796.1 MGP_CBAJ_G0034912.1 mouse_genomes_project 9 116419754 116424377 + MGP_CBAJ_P0093796 Nat6 protein_coding protein_coding MGP_CBAJ_T0093797.1 MGP_CBAJ_G0034912.1 mouse_genomes_project 9 116419754 116424377 + MGP_CBAJ_P0093797 Nat6 protein_coding protein_coding MGP_CBAJ_T0093799.1 MGP_CBAJ_G0034912.1 mouse_genomes_project 9 116420984 116424908 + MGP_CBAJ_P0093799 Nat6 protein_coding protein_coding MGP_CBAJ_T0005344.1 MGP_CBAJ_G0004522.1 mouse_genomes_project 9 32568679 32570200 - Gm27240 antisense antisense MGP_CBAJ_T0091326.1 MGP_CBAJ_G0034251.1 mouse_genomes_project 9 38929916 38931009 + MGP_CBAJ_P0091326 Olfr251 protein_coding protein_coding MGP_CBAJ_T0090734.1 MGP_CBAJ_G0034017.1 mouse_genomes_project 9 13204651 13229455 + MGP_CBAJ_P0090734 Vstm5 protein_coding protein_coding MGP_CBAJ_T0009107.1 MGP_CBAJ_G0007307.1 mouse_genomes_project 9 20099971 20106450 - Gm16853 lincRNA lincRNA MGP_CBAJ_T0092087.1 MGP_CBAJ_G0034538.1 mouse_genomes_project 9 60986813 61071697 + Stra6 protein_coding retained_intron MGP_CBAJ_T0092090.1 MGP_CBAJ_G0034538.1 mouse_genomes_project 9 61002322 61070888 + MGP_CBAJ_P0092090 Stra6 protein_coding protein_coding MGP_CBAJ_T0092091.1 MGP_CBAJ_G0034538.1 mouse_genomes_project 9 61002397 61069101 + MGP_CBAJ_P0092091 Stra6 protein_coding protein_coding MGP_CBAJ_T0092094.1 MGP_CBAJ_G0034538.1 mouse_genomes_project 9 61058755 61087700 + MGP_CBAJ_P0092094 Stra6 protein_coding protein_coding MGP_CBAJ_T0092095.1 MGP_CBAJ_G0034538.1 mouse_genomes_project 9 61059016 61087698 + MGP_CBAJ_P0092095 Stra6 protein_coding protein_coding MGP_CBAJ_T0092096.1 MGP_CBAJ_G0034538.1 mouse_genomes_project 9 61059168 61070537 + MGP_CBAJ_P0092096 Stra6 protein_coding protein_coding MGP_CBAJ_T0092097.1 MGP_CBAJ_G0034538.1 mouse_genomes_project 9 61061562 61070110 + MGP_CBAJ_P0092097 Stra6 protein_coding protein_coding MGP_CBAJ_T0092098.1 MGP_CBAJ_G0034538.1 mouse_genomes_project 9 61063682 61070862 + MGP_CBAJ_P0092098 Stra6 protein_coding protein_coding MGP_CBAJ_T0092099.1 MGP_CBAJ_G0034538.1 mouse_genomes_project 9 61063740 61087741 + MGP_CBAJ_P0092099 Stra6 protein_coding protein_coding MGP_CBAJ_T0092100.1 MGP_CBAJ_G0034538.1 mouse_genomes_project 9 61063740 61070778 + MGP_CBAJ_P0092100 Stra6 protein_coding protein_coding MGP_CBAJ_T0092101.1 MGP_CBAJ_G0034538.1 mouse_genomes_project 9 61064200 61070784 + MGP_CBAJ_P0092101 Stra6 protein_coding protein_coding MGP_CBAJ_T0092102.1 MGP_CBAJ_G0034538.1 mouse_genomes_project 9 61064330 61087741 + MGP_CBAJ_P0092102 Stra6 protein_coding protein_coding MGP_CBAJ_T0092103.1 MGP_CBAJ_G0034538.1 mouse_genomes_project 9 61064330 61070794 + MGP_CBAJ_P0092103 Stra6 protein_coding protein_coding MGP_CBAJ_T0092104.1 MGP_CBAJ_G0034538.1 mouse_genomes_project 9 61064475 61069032 + MGP_CBAJ_P0092104 Stra6 protein_coding protein_coding MGP_CBAJ_T0098478.1 MGP_CBAJ_G0036738.1 mouse_genomes_project 9 125465912 125472985 + sense_intronic sense_intronic MGP_CBAJ_T0015933.1 MGP_CBAJ_G0014045.1 mouse_genomes_project 9 134541859 134542278 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0091858.1 MGP_CBAJ_G0034458.1 mouse_genomes_project 9 54253513 54294973 + MGP_CBAJ_P0091858 Rdx protein_coding protein_coding MGP_CBAJ_T0091859.1 MGP_CBAJ_G0034458.1 mouse_genomes_project 9 54254304 54294973 + MGP_CBAJ_P0091859 Rdx protein_coding protein_coding MGP_CBAJ_T0091860.1 MGP_CBAJ_G0034458.1 mouse_genomes_project 9 54254304 54281440 + MGP_CBAJ_P0091860 Rdx protein_coding protein_coding MGP_CBAJ_T0093115.1 MGP_CBAJ_G0034775.1 mouse_genomes_project 9 98204441 98212109 - MGP_CBAJ_P0093115 Zic1 protein_coding protein_coding MGP_CBAJ_T0093116.1 MGP_CBAJ_G0034775.1 mouse_genomes_project 9 98206883 98212151 - MGP_CBAJ_P0093116 Zic1 protein_coding protein_coding MGP_CBAJ_T0093117.1 MGP_CBAJ_G0034775.1 mouse_genomes_project 9 98207961 98209427 - Zic1 protein_coding processed_transcript MGP_CBAJ_T0015874.1 MGP_CBAJ_G0013986.1 mouse_genomes_project 9 96963725 96964009 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0091353.1 MGP_CBAJ_G0034272.1 mouse_genomes_project 9 39438384 39444896 + MGP_CBAJ_P0091353 Olfr924 protein_coding protein_coding MGP_CBAJ_T0010943.1 MGP_CBAJ_G0009081.1 mouse_genomes_project 9 61170934 61171039 + Mir6385 miRNA miRNA MGP_CBAJ_T0010971.1 MGP_CBAJ_G0009109.1 mouse_genomes_project 9 117879147 117879233 + Gm23156 miRNA miRNA MGP_CBAJ_T0009190.1 MGP_CBAJ_G0007375.1 mouse_genomes_project 9 97609157 97612741 - Gm28703 lincRNA lincRNA MGP_CBAJ_T0011609.1 MGP_CBAJ_G0009747.1 mouse_genomes_project 9 45724703 45724980 + Gm22141 misc_RNA misc_RNA MGP_CBAJ_T0090711.1 MGP_CBAJ_G0034010.1 mouse_genomes_project 9 12660617 12668121 - MGP_CBAJ_P0090711 1700012B09Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0090712.1 MGP_CBAJ_G0034010.1 mouse_genomes_project 9 12660623 12677435 - MGP_CBAJ_P0090712 1700012B09Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0090713.1 MGP_CBAJ_G0034010.1 mouse_genomes_project 9 12660625 12668077 - MGP_CBAJ_P0090713 1700012B09Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0090714.1 MGP_CBAJ_G0034010.1 mouse_genomes_project 9 12662255 12677452 - MGP_CBAJ_P0090714 1700012B09Rik protein_coding protein_coding MGP_CBAJ_T0090715.1 MGP_CBAJ_G0034010.1 mouse_genomes_project 9 12662255 12677435 - MGP_CBAJ_P0090715 1700012B09Rik protein_coding protein_coding MGP_CBAJ_T0015926.1 MGP_CBAJ_G0014038.1 mouse_genomes_project 9 127526006 127526557 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0091443.1 MGP_CBAJ_G0034329.1 mouse_genomes_project 9 41893914 42052259 - MGP_CBAJ_P0091443 Ubash3b protein_coding protein_coding MGP_CBAJ_T0091444.1 MGP_CBAJ_G0034329.1 mouse_genomes_project 9 41939235 42060438 - Ubash3b protein_coding processed_transcript MGP_CBAJ_T0091445.1 MGP_CBAJ_G0034329.1 mouse_genomes_project 9 41939263 42052335 - MGP_CBAJ_P0091445 Ubash3b protein_coding protein_coding MGP_CBAJ_T0091446.1 MGP_CBAJ_G0034329.1 mouse_genomes_project 9 41939321 42060606 - MGP_CBAJ_P0091446 Ubash3b protein_coding protein_coding MGP_CBAJ_T0091447.1 MGP_CBAJ_G0034329.1 mouse_genomes_project 9 42054665 42060615 - Ubash3b protein_coding processed_transcript MGP_CBAJ_T0090908.1 MGP_CBAJ_G0034100.1 mouse_genomes_project 9 19927416 19937178 + MGP_CBAJ_P0090908 Atg4d protein_coding protein_coding MGP_CBAJ_T0002389.1 MGP_CBAJ_G0002301.1 mouse_genomes_project 9 108082665 108083815 - TEC TEC MGP_CBAJ_T0010972.1 MGP_CBAJ_G0009110.1 mouse_genomes_project 9 117961590 117961672 + Mir711 miRNA miRNA MGP_CBAJ_T0090792.1 MGP_CBAJ_G0034042.1 mouse_genomes_project 9 17343752 17344691 + MGP_CBAJ_P0090792 Olfr834 protein_coding protein_coding MGP_CBAJ_T0091611.1 MGP_CBAJ_G0034379.1 mouse_genomes_project 9 46418154 46428945 - MGP_CBAJ_P0091611 Cd3g protein_coding protein_coding MGP_CBAJ_T0091612.1 MGP_CBAJ_G0034379.1 mouse_genomes_project 9 46418336 46419400 - Cd3g protein_coding retained_intron MGP_CBAJ_T0091613.1 MGP_CBAJ_G0034379.1 mouse_genomes_project 9 46422142 46428945 - MGP_CBAJ_P0091613 Cd3g protein_coding protein_coding MGP_CBAJ_T0009140.1 MGP_CBAJ_G0007335.1 mouse_genomes_project 9 59300600 59310939 + Gm26868 lincRNA lincRNA MGP_CBAJ_T0091406.1 MGP_CBAJ_G0034319.1 mouse_genomes_project 9 40975587 40976604 + MGP_CBAJ_P0091406 Olfr986 protein_coding protein_coding MGP_CBAJ_T0097857.1 MGP_CBAJ_G0036130.1 mouse_genomes_project 9 38702626 38703553 + pseudogene pseudogene MGP_CBAJ_T0091076.1 MGP_CBAJ_G0034164.1 mouse_genomes_project 9 27155032 27155783 + Opcml protein_coding processed_transcript MGP_CBAJ_T0091077.1 MGP_CBAJ_G0034164.1 mouse_genomes_project 9 27155204 28348471 + MGP_CBAJ_P0091077 Opcml protein_coding protein_coding MGP_CBAJ_T0091078.1 MGP_CBAJ_G0034164.1 mouse_genomes_project 9 27155559 27407552 + Opcml protein_coding processed_transcript MGP_CBAJ_T0091079.1 MGP_CBAJ_G0034164.1 mouse_genomes_project 9 27808355 27811159 + Opcml protein_coding processed_transcript MGP_CBAJ_T0091080.1 MGP_CBAJ_G0034164.1 mouse_genomes_project 9 27809003 28344142 + MGP_CBAJ_P0091080 Opcml protein_coding protein_coding MGP_CBAJ_T0091081.1 MGP_CBAJ_G0034164.1 mouse_genomes_project 9 27809290 28235179 + Opcml protein_coding retained_intron MGP_CBAJ_T0091082.1 MGP_CBAJ_G0034164.1 mouse_genomes_project 9 27809376 28062938 + Opcml protein_coding processed_transcript MGP_CBAJ_T0091083.1 MGP_CBAJ_G0034164.1 mouse_genomes_project 9 28074253 28088193 + Opcml protein_coding processed_transcript MGP_CBAJ_T0099584.1 MGP_CBAJ_G0037839.1 mouse_genomes_project 9 88911 89015 + Gm23275 snRNA snRNA MGP_CBAJ_T0005394.1 MGP_CBAJ_G0004555.1 mouse_genomes_project 9 77310437 77311265 - Gm27232 antisense antisense MGP_CBAJ_T0093470.1 MGP_CBAJ_G0034854.1 mouse_genomes_project 9 112345848 112383281 + Nphp3 protein_coding retained_intron MGP_CBAJ_T0093471.1 MGP_CBAJ_G0034854.1 mouse_genomes_project 9 112345850 112387205 + MGP_CBAJ_P0093471 Nphp3 protein_coding protein_coding MGP_CBAJ_T0093472.1 MGP_CBAJ_G0034854.1 mouse_genomes_project 9 112345958 112386496 + MGP_CBAJ_P0093472 Nphp3 protein_coding protein_coding MGP_CBAJ_T0093473.1 MGP_CBAJ_G0034854.1 mouse_genomes_project 9 112345958 112525959 + MGP_CBAJ_P0093473 Nphp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093474.1 MGP_CBAJ_G0034854.1 mouse_genomes_project 9 112346062 112360021 + Nphp3 protein_coding retained_intron MGP_CBAJ_T0093475.1 MGP_CBAJ_G0034854.1 mouse_genomes_project 9 112346071 112385737 + MGP_CBAJ_P0093475 Nphp3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093476.1 MGP_CBAJ_G0034854.1 mouse_genomes_project 9 112375437 112378000 + Nphp3 protein_coding retained_intron MGP_CBAJ_T0093477.1 MGP_CBAJ_G0034854.1 mouse_genomes_project 9 112379425 112382086 + MGP_CBAJ_P0093477 Nphp3 protein_coding protein_coding MGP_CBAJ_T0091643.1 MGP_CBAJ_G0034394.1 mouse_genomes_project 9 46936273 47293696 + MGP_CBAJ_P0091643 protein_coding protein_coding MGP_CBAJ_T0092077.1 MGP_CBAJ_G0034535.1 mouse_genomes_project 9 60830428 60855560 + MGP_CBAJ_P0092077 Sema7a protein_coding protein_coding MGP_CBAJ_T0002437.1 MGP_CBAJ_G0002349.1 mouse_genomes_project 9 132814966 132818262 - TEC TEC MGP_CBAJ_T0010949.1 MGP_CBAJ_G0009087.1 mouse_genomes_project 9 71339815 71339882 - Mir190a miRNA miRNA MGP_CBAJ_T0015808.1 MGP_CBAJ_G0013920.1 mouse_genomes_project 9 38696063 38697085 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0094885.1 MGP_CBAJ_G0035140.1 mouse_genomes_project 9 135398380 135416052 + MGP_CBAJ_P0094885 Ccr3 protein_coding protein_coding MGP_CBAJ_T0090785.1 MGP_CBAJ_G0034035.1 mouse_genomes_project 9 16794377 16807024 - MGP_CBAJ_P0090785 protein_coding protein_coding MGP_CBAJ_T0015846.1 MGP_CBAJ_G0013958.1 mouse_genomes_project 9 82208818 82209023 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0093800.1 MGP_CBAJ_G0034913.1 mouse_genomes_project 9 116421685 116427690 + MGP_CBAJ_P0093800 Hyal3 protein_coding protein_coding MGP_CBAJ_T0093801.1 MGP_CBAJ_G0034913.1 mouse_genomes_project 9 116422163 116428193 + MGP_CBAJ_P0093801 Hyal3 protein_coding protein_coding MGP_CBAJ_T0093802.1 MGP_CBAJ_G0034913.1 mouse_genomes_project 9 116425609 116427519 + MGP_CBAJ_P0093802 Hyal3 protein_coding protein_coding MGP_CBAJ_T0091340.1 MGP_CBAJ_G0034265.1 mouse_genomes_project 9 39231152 39232082 - MGP_CBAJ_P0091340 Olfr917 protein_coding protein_coding MGP_CBAJ_T0093143.1 MGP_CBAJ_G0034782.1 mouse_genomes_project 9 99555877 99638324 + MGP_CBAJ_P0093143 Plod2 protein_coding protein_coding MGP_CBAJ_T0093144.1 MGP_CBAJ_G0034782.1 mouse_genomes_project 9 99555918 99638316 + MGP_CBAJ_P0093144 Plod2 protein_coding protein_coding MGP_CBAJ_T0093145.1 MGP_CBAJ_G0034782.1 mouse_genomes_project 9 99601861 99621397 + Plod2 protein_coding retained_intron MGP_CBAJ_T0093146.1 MGP_CBAJ_G0034782.1 mouse_genomes_project 9 99625057 99630779 + Plod2 protein_coding retained_intron MGP_CBAJ_T0093147.1 MGP_CBAJ_G0034782.1 mouse_genomes_project 9 99631054 99632330 + Plod2 protein_coding retained_intron MGP_CBAJ_T0094689.1 MGP_CBAJ_G0035071.1 mouse_genomes_project 9 130219602 130254287 + MGP_CBAJ_P0094689 Acvr2b protein_coding protein_coding MGP_CBAJ_T0094690.1 MGP_CBAJ_G0035071.1 mouse_genomes_project 9 130219659 130254287 + MGP_CBAJ_P0094690 Acvr2b protein_coding protein_coding MGP_CBAJ_T0094691.1 MGP_CBAJ_G0035071.1 mouse_genomes_project 9 130219704 130254247 + MGP_CBAJ_P0094691 Acvr2b protein_coding unknown_likely_coding MGP_CBAJ_T0092708.1 MGP_CBAJ_G0034684.1 mouse_genomes_project 9 78260298 78793896 - MGP_CBAJ_P0092708 Unc13c protein_coding protein_coding MGP_CBAJ_T0092709.1 MGP_CBAJ_G0034684.1 mouse_genomes_project 9 78260302 78793868 - MGP_CBAJ_P0092709 Unc13c protein_coding unknown_likely_coding MGP_CBAJ_T0092710.1 MGP_CBAJ_G0034684.1 mouse_genomes_project 9 78261746 78759216 - MGP_CBAJ_P0092710 Unc13c protein_coding protein_coding MGP_CBAJ_T0090892.1 MGP_CBAJ_G0034094.1 mouse_genomes_project 9 19699240 19717039 - MGP_CBAJ_P0090892 Raver1 protein_coding protein_coding MGP_CBAJ_T0091735.1 MGP_CBAJ_G0034419.1 mouse_genomes_project 9 50510101 50719867 - MGP_CBAJ_P0091735 Zbtb16 protein_coding unknown_likely_coding MGP_CBAJ_T0090735.1 MGP_CBAJ_G0034018.1 mouse_genomes_project 9 13230413 13249930 - MGP_CBAJ_P0090735 Med17 protein_coding protein_coding MGP_CBAJ_T0094590.1 MGP_CBAJ_G0035043.1 mouse_genomes_project 9 124855222 124901692 + MGP_CBAJ_P0094590 Dync1li1 protein_coding protein_coding MGP_CBAJ_T0092549.1 MGP_CBAJ_G0034654.1 mouse_genomes_project 9 74873894 74890147 - MGP_CBAJ_P0092549 Ccnb2 protein_coding protein_coding MGP_CBAJ_T0009167.1 MGP_CBAJ_G0007357.1 mouse_genomes_project 9 79765579 79810607 + Gm20649 lincRNA lincRNA MGP_CBAJ_T0093002.1 MGP_CBAJ_G0034751.1 mouse_genomes_project 9 92948066 92950898 + MGP_CBAJ_P0093002 Rwdd2a protein_coding protein_coding MGP_CBAJ_T0093003.1 MGP_CBAJ_G0034751.1 mouse_genomes_project 9 92948091 92951064 + MGP_CBAJ_P0093003 Rwdd2a protein_coding protein_coding MGP_CBAJ_T0093004.1 MGP_CBAJ_G0034751.1 mouse_genomes_project 9 92948128 92951005 + MGP_CBAJ_P0093004 Rwdd2a protein_coding protein_coding MGP_CBAJ_T0099647.1 MGP_CBAJ_G0037902.1 mouse_genomes_project 9 129130604 129130685 - Gm22479 snRNA snRNA MGP_CBAJ_T0093163.1 MGP_CBAJ_G0034787.1 mouse_genomes_project 9 102903194 102911559 + MGP_CBAJ_P0093163 Paqr9 protein_coding protein_coding MGP_CBAJ_T0011625.1 MGP_CBAJ_G0009763.1 mouse_genomes_project 9 132212498 132212744 + Gm22987 misc_RNA misc_RNA MGP_CBAJ_T0092159.1 MGP_CBAJ_G0034555.1 mouse_genomes_project 9 62655023 62687145 + MGP_CBAJ_P0092159 Hexa protein_coding protein_coding MGP_CBAJ_T0090778.1 MGP_CBAJ_G0034031.1 mouse_genomes_project 9 16716616 16718109 + MGP_CBAJ_P0090778 Gm5612 protein_coding protein_coding MGP_CBAJ_T0094575.1 MGP_CBAJ_G0035033.1 mouse_genomes_project 9 123913302 123984578 - MGP_CBAJ_P0094575 Fbxl2 protein_coding protein_coding MGP_CBAJ_T0094576.1 MGP_CBAJ_G0035033.1 mouse_genomes_project 9 123926635 123984610 - MGP_CBAJ_P0094576 Fbxl2 protein_coding protein_coding MGP_CBAJ_T0094577.1 MGP_CBAJ_G0035033.1 mouse_genomes_project 9 123930642 123984575 - MGP_CBAJ_P0094577 Fbxl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094578.1 MGP_CBAJ_G0035033.1 mouse_genomes_project 9 123935944 123947140 - Fbxl2 protein_coding retained_intron MGP_CBAJ_T0094579.1 MGP_CBAJ_G0035033.1 mouse_genomes_project 9 123944888 123984623 - Fbxl2 protein_coding retained_intron MGP_CBAJ_T0094580.1 MGP_CBAJ_G0035033.1 mouse_genomes_project 9 123957857 124006136 - Fbxl2 protein_coding processed_transcript MGP_CBAJ_T0091665.1 MGP_CBAJ_G0034398.1 mouse_genomes_project 9 47467604 47491653 + MGP_CBAJ_P0091665 Pcsk7 protein_coding protein_coding MGP_CBAJ_T0009113.1 MGP_CBAJ_G0007313.1 mouse_genomes_project 9 30699733 30701581 - Gm17508 lincRNA lincRNA MGP_CBAJ_T0092704.1 MGP_CBAJ_G0034683.1 mouse_genomes_project 9 77856202 77865006 + MGP_CBAJ_P0092704 Rsl24d1 protein_coding protein_coding MGP_CBAJ_T0092705.1 MGP_CBAJ_G0034683.1 mouse_genomes_project 9 77856224 77865625 + MGP_CBAJ_P0092705 Rsl24d1 protein_coding protein_coding MGP_CBAJ_T0092706.1 MGP_CBAJ_G0034683.1 mouse_genomes_project 9 77856279 77864863 + MGP_CBAJ_P0092706 Rsl24d1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092707.1 MGP_CBAJ_G0034683.1 mouse_genomes_project 9 77857372 77864676 + MGP_CBAJ_P0092707 Rsl24d1 protein_coding protein_coding MGP_CBAJ_T0002350.1 MGP_CBAJ_G0002263.1 mouse_genomes_project 9 81137150 81142581 + TEC TEC MGP_CBAJ_T0093135.1 MGP_CBAJ_G0034780.1 mouse_genomes_project 9 99307897 99329596 + 1700057G04Rik protein_coding processed_transcript MGP_CBAJ_T0093136.1 MGP_CBAJ_G0034780.1 mouse_genomes_project 9 99307897 99348460 + MGP_CBAJ_P0093136 1700057G04Rik protein_coding protein_coding MGP_CBAJ_T0093137.1 MGP_CBAJ_G0034780.1 mouse_genomes_project 9 99307897 99362645 + MGP_CBAJ_P0093137 1700057G04Rik protein_coding protein_coding MGP_CBAJ_T0093138.1 MGP_CBAJ_G0034780.1 mouse_genomes_project 9 99307928 99355845 + 1700057G04Rik protein_coding processed_transcript MGP_CBAJ_T0093139.1 MGP_CBAJ_G0034780.1 mouse_genomes_project 9 99348281 99362588 + MGP_CBAJ_P0093139 1700057G04Rik protein_coding protein_coding MGP_CBAJ_T0093140.1 MGP_CBAJ_G0034780.1 mouse_genomes_project 9 99355858 99362645 + MGP_CBAJ_P0093140 1700057G04Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0002372.1 MGP_CBAJ_G0002284.1 mouse_genomes_project 9 98090911 98093388 - TEC TEC MGP_CBAJ_T0093369.1 MGP_CBAJ_G0034832.1 mouse_genomes_project 9 109042325 109105863 - MGP_CBAJ_P0093369 Pccb protein_coding protein_coding MGP_CBAJ_T0093370.1 MGP_CBAJ_G0034832.1 mouse_genomes_project 9 109042325 109105842 - MGP_CBAJ_P0093370 Pccb protein_coding protein_coding MGP_CBAJ_T0093371.1 MGP_CBAJ_G0034832.1 mouse_genomes_project 9 109044659 109045959 - Pccb protein_coding retained_intron MGP_CBAJ_T0093372.1 MGP_CBAJ_G0034832.1 mouse_genomes_project 9 109059507 109105832 - MGP_CBAJ_P0093372 Pccb protein_coding protein_coding MGP_CBAJ_T0093373.1 MGP_CBAJ_G0034832.1 mouse_genomes_project 9 109081114 109105819 - Pccb protein_coding processed_transcript MGP_CBAJ_T0093374.1 MGP_CBAJ_G0034832.1 mouse_genomes_project 9 109091892 109105846 - MGP_CBAJ_P0093374 Pccb protein_coding protein_coding MGP_CBAJ_T0094128.1 MGP_CBAJ_G0034956.1 mouse_genomes_project 9 117554124 117555160 - Ndufaf3 protein_coding retained_intron MGP_CBAJ_T0094129.1 MGP_CBAJ_G0034956.1 mouse_genomes_project 9 117554208 117555177 - MGP_CBAJ_P0094129 Ndufaf3 protein_coding protein_coding MGP_CBAJ_T0094130.1 MGP_CBAJ_G0034956.1 mouse_genomes_project 9 117554426 117555180 - Ndufaf3 protein_coding retained_intron MGP_CBAJ_T0091110.1 MGP_CBAJ_G0034173.1 mouse_genomes_project 9 30929692 30993265 + MGP_CBAJ_P0091110 Prdm10 protein_coding protein_coding MGP_CBAJ_T0091111.1 MGP_CBAJ_G0034173.1 mouse_genomes_project 9 30971402 31048785 + MGP_CBAJ_P0091111 Prdm10 protein_coding unknown_likely_coding MGP_CBAJ_T0091112.1 MGP_CBAJ_G0034173.1 mouse_genomes_project 9 30974694 30993254 + Prdm10 protein_coding retained_intron MGP_CBAJ_T0091113.1 MGP_CBAJ_G0034173.1 mouse_genomes_project 9 30974993 31045592 + MGP_CBAJ_P0091113 Prdm10 protein_coding protein_coding MGP_CBAJ_T0010925.1 MGP_CBAJ_G0009063.1 mouse_genomes_project 9 27688358 27688455 + Gm44316 miRNA miRNA MGP_CBAJ_T0093485.1 MGP_CBAJ_G0034858.1 mouse_genomes_project 9 112439130 112465649 - Ackr4 protein_coding processed_transcript MGP_CBAJ_T0093488.1 MGP_CBAJ_G0034858.1 mouse_genomes_project 9 112461226 112492165 - MGP_CBAJ_P0093488 Ackr4 protein_coding protein_coding MGP_CBAJ_T0093489.1 MGP_CBAJ_G0034858.1 mouse_genomes_project 9 112461357 112466108 - MGP_CBAJ_P0093489 Ackr4 protein_coding protein_coding MGP_CBAJ_T0092150.1 MGP_CBAJ_G0034552.1 mouse_genomes_project 9 62375688 62411613 - MGP_CBAJ_P0092150 Bbs4 protein_coding protein_coding MGP_CBAJ_T0092348.1 MGP_CBAJ_G0034602.1 mouse_genomes_project 9 68813867 68868724 + MGP_CBAJ_P0092348 Dpp8 protein_coding protein_coding MGP_CBAJ_T0092349.1 MGP_CBAJ_G0034602.1 mouse_genomes_project 9 68814131 68867064 + MGP_CBAJ_P0092349 Dpp8 protein_coding protein_coding MGP_CBAJ_T0100866.1 MGP_CBAJ_G0039121.1 mouse_genomes_project 9 39075747 39075871 + Gm23271 snoRNA snoRNA MGP_CBAJ_T0092772.1 MGP_CBAJ_G0034701.1 mouse_genomes_project 9 81251353 81305283 - MGP_CBAJ_P0092772 Gfral protein_coding protein_coding MGP_CBAJ_T0092773.1 MGP_CBAJ_G0034701.1 mouse_genomes_project 9 81251353 81305283 - MGP_CBAJ_P0092773 Gfral protein_coding nonsense_mediated_decay MGP_CBAJ_T0091375.1 MGP_CBAJ_G0034294.1 mouse_genomes_project 9 40269598 40270653 - MGP_CBAJ_P0091375 Olfr959 protein_coding protein_coding MGP_CBAJ_T0100879.1 MGP_CBAJ_G0039134.1 mouse_genomes_project 9 67817193 67817292 + Snord16a snoRNA snoRNA MGP_CBAJ_T0093130.1 MGP_CBAJ_G0034777.1 mouse_genomes_project 9 99167575 99194373 + MGP_CBAJ_P0093130 Plscr5 protein_coding protein_coding MGP_CBAJ_T0099601.1 MGP_CBAJ_G0037856.1 mouse_genomes_project 9 47152920 47153027 - Gm22069 snRNA snRNA MGP_CBAJ_T0091338.1 MGP_CBAJ_G0034263.1 mouse_genomes_project 9 39162680 39163631 + MGP_CBAJ_P0091338 Olfr914 protein_coding protein_coding MGP_CBAJ_T0018323.1 MGP_CBAJ_G0015500.1 mouse_genomes_project 9 117858520 117859680 - Gm35025 processed_transcript lincRNA MGP_CBAJ_T0018324.1 MGP_CBAJ_G0015500.1 mouse_genomes_project 9 117858652 117859401 - Gm35025 processed_transcript lincRNA MGP_CBAJ_T0018325.1 MGP_CBAJ_G0015500.1 mouse_genomes_project 9 117858749 117859443 - Gm35025 processed_transcript TEC MGP_CBAJ_T0093290.1 MGP_CBAJ_G0034816.1 mouse_genomes_project 9 106764848 106801749 - MGP_CBAJ_P0093290 Gm1123 protein_coding protein_coding MGP_CBAJ_T0092684.1 MGP_CBAJ_G0034679.1 mouse_genomes_project 9 77750763 77783518 - MGP_CBAJ_P0092684 Pigb protein_coding nonsense_mediated_decay MGP_CBAJ_T0092685.1 MGP_CBAJ_G0034679.1 mouse_genomes_project 9 77751825 77759002 - MGP_CBAJ_P0092685 Pigb protein_coding protein_coding MGP_CBAJ_T0092687.1 MGP_CBAJ_G0034679.1 mouse_genomes_project 9 77757055 77782839 - MGP_CBAJ_P0092687 Pigb protein_coding protein_coding MGP_CBAJ_T0092688.1 MGP_CBAJ_G0034679.1 mouse_genomes_project 9 77758008 77782791 - MGP_CBAJ_P0092688 Pigb protein_coding protein_coding MGP_CBAJ_T0092690.1 MGP_CBAJ_G0034679.1 mouse_genomes_project 9 77759040 77782839 - MGP_CBAJ_P0092690 Pigb protein_coding protein_coding MGP_CBAJ_T0092691.1 MGP_CBAJ_G0034679.1 mouse_genomes_project 9 77760955 77762549 - Pigb protein_coding retained_intron MGP_CBAJ_T0092692.1 MGP_CBAJ_G0034679.1 mouse_genomes_project 9 77765689 77779932 - MGP_CBAJ_P0092692 Pigb protein_coding nonsense_mediated_decay MGP_CBAJ_T0092693.1 MGP_CBAJ_G0034679.1 mouse_genomes_project 9 77772346 77775391 - Pigb protein_coding retained_intron MGP_CBAJ_T0092694.1 MGP_CBAJ_G0034679.1 mouse_genomes_project 9 77776123 77777911 - Pigb protein_coding retained_intron MGP_CBAJ_T0100896.1 MGP_CBAJ_G0039151.1 mouse_genomes_project 9 93078187 93078315 + Gm22138 snoRNA snoRNA MGP_CBAJ_T0090812.1 MGP_CBAJ_G0034062.1 mouse_genomes_project 9 18401999 18407297 + MGP_CBAJ_P0090812 Olfr77 protein_coding protein_coding MGP_CBAJ_T0093601.1 MGP_CBAJ_G0034877.1 mouse_genomes_project 9 114885740 114903671 - MGP_CBAJ_P0093601 Alas1 protein_coding protein_coding MGP_CBAJ_T0093602.1 MGP_CBAJ_G0034877.1 mouse_genomes_project 9 114885743 114904067 - MGP_CBAJ_P0093602 Alas1 protein_coding protein_coding MGP_CBAJ_T0093603.1 MGP_CBAJ_G0034877.1 mouse_genomes_project 9 114886212 114903797 - MGP_CBAJ_P0093603 Alas1 protein_coding protein_coding MGP_CBAJ_T0093604.1 MGP_CBAJ_G0034877.1 mouse_genomes_project 9 114886227 114895920 - Alas1 protein_coding processed_transcript MGP_CBAJ_T0093605.1 MGP_CBAJ_G0034877.1 mouse_genomes_project 9 114886480 114891016 - MGP_CBAJ_P0093605 Alas1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093606.1 MGP_CBAJ_G0034877.1 mouse_genomes_project 9 114887674 114889370 - Alas1 protein_coding retained_intron MGP_CBAJ_T0093607.1 MGP_CBAJ_G0034877.1 mouse_genomes_project 9 114888963 114892319 - Alas1 protein_coding retained_intron MGP_CBAJ_T0093608.1 MGP_CBAJ_G0034877.1 mouse_genomes_project 9 114891101 114903793 - MGP_CBAJ_P0093608 Alas1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093030.1 MGP_CBAJ_G0034758.1 mouse_genomes_project 9 93573365 93648356 - MGP_CBAJ_P0093030 Cep162 protein_coding protein_coding MGP_CBAJ_T0093031.1 MGP_CBAJ_G0034758.1 mouse_genomes_project 9 93593602 93599157 - Cep162 protein_coding processed_transcript MGP_CBAJ_T0093032.1 MGP_CBAJ_G0034758.1 mouse_genomes_project 9 93617325 93620320 - Cep162 protein_coding retained_intron MGP_CBAJ_T0093033.1 MGP_CBAJ_G0034758.1 mouse_genomes_project 9 93618083 93648108 - Cep162 protein_coding retained_intron MGP_CBAJ_T0094799.1 MGP_CBAJ_G0035106.1 mouse_genomes_project 9 133000974 133002924 - MGP_CBAJ_P0094799 Cyp8b1 protein_coding protein_coding MGP_CBAJ_T0099641.1 MGP_CBAJ_G0037896.1 mouse_genomes_project 9 115921472 115921579 + Gm22454 snRNA snRNA MGP_CBAJ_T0015895.1 MGP_CBAJ_G0014007.1 mouse_genomes_project 9 104600008 104600309 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010951.1 MGP_CBAJ_G0009089.1 mouse_genomes_project 9 71880427 71880506 - Mir7242 miRNA miRNA MGP_CBAJ_T0092141.1 MGP_CBAJ_G0034548.1 mouse_genomes_project 9 61664137 61670614 - Rec114 protein_coding processed_transcript MGP_CBAJ_T0092142.1 MGP_CBAJ_G0034548.1 mouse_genomes_project 9 61664143 61758020 - MGP_CBAJ_P0092142 Rec114 protein_coding protein_coding MGP_CBAJ_T0092143.1 MGP_CBAJ_G0034548.1 mouse_genomes_project 9 61664165 61675592 - Rec114 protein_coding processed_transcript MGP_CBAJ_T0092144.1 MGP_CBAJ_G0034548.1 mouse_genomes_project 9 61664168 61671690 - MGP_CBAJ_P0092144 Rec114 protein_coding protein_coding MGP_CBAJ_T0092145.1 MGP_CBAJ_G0034548.1 mouse_genomes_project 9 61677185 61760425 - MGP_CBAJ_P0092145 Rec114 protein_coding protein_coding MGP_CBAJ_T0090616.1 MGP_CBAJ_G0033978.1 mouse_genomes_project 9 4587034 4604822 + MGP_CBAJ_P0090616 Mmp1a protein_coding protein_coding MGP_CBAJ_T0100902.1 MGP_CBAJ_G0039157.1 mouse_genomes_project 9 107603684 107603811 - Gm23949 snoRNA snoRNA MGP_CBAJ_T0015889.1 MGP_CBAJ_G0014001.1 mouse_genomes_project 9 102977122 102977564 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0092212.1 MGP_CBAJ_G0034567.1 mouse_genomes_project 9 64046974 64063256 - MGP_CBAJ_P0092212 Gm9869 protein_coding protein_coding MGP_CBAJ_T0005346.1 MGP_CBAJ_G0004524.1 mouse_genomes_project 9 37030486 37069087 + antisense antisense MGP_CBAJ_T0091224.1 MGP_CBAJ_G0034210.1 mouse_genomes_project 9 36962494 36982887 - MGP_CBAJ_P0091224 Chek1 protein_coding protein_coding MGP_CBAJ_T0091225.1 MGP_CBAJ_G0034210.1 mouse_genomes_project 9 36962494 36983171 - MGP_CBAJ_P0091225 Chek1 protein_coding protein_coding MGP_CBAJ_T0091226.1 MGP_CBAJ_G0034210.1 mouse_genomes_project 9 36963432 36983098 - MGP_CBAJ_P0091226 Chek1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091227.1 MGP_CBAJ_G0034210.1 mouse_genomes_project 9 36964149 36982381 - MGP_CBAJ_P0091227 Chek1 protein_coding protein_coding MGP_CBAJ_T0091228.1 MGP_CBAJ_G0034210.1 mouse_genomes_project 9 36964149 36982381 - MGP_CBAJ_P0091228 Chek1 protein_coding protein_coding MGP_CBAJ_T0091229.1 MGP_CBAJ_G0034210.1 mouse_genomes_project 9 36967732 36979238 - Chek1 protein_coding retained_intron MGP_CBAJ_T0091230.1 MGP_CBAJ_G0034210.1 mouse_genomes_project 9 36979141 36983577 - Chek1 protein_coding processed_transcript MGP_CBAJ_T0091231.1 MGP_CBAJ_G0034210.1 mouse_genomes_project 9 36980095 36983083 - Chek1 protein_coding retained_intron MGP_CBAJ_T0091232.1 MGP_CBAJ_G0034210.1 mouse_genomes_project 9 36980354 36982964 - MGP_CBAJ_P0091232 Chek1 protein_coding protein_coding MGP_CBAJ_T0091768.1 MGP_CBAJ_G0034438.1 mouse_genomes_project 9 52694435 52708059 - MGP_CBAJ_P0091768 AU019823 protein_coding protein_coding MGP_CBAJ_T0091769.1 MGP_CBAJ_G0034438.1 mouse_genomes_project 9 52694439 52708059 - MGP_CBAJ_P0091769 AU019823 protein_coding protein_coding MGP_CBAJ_T0091770.1 MGP_CBAJ_G0034438.1 mouse_genomes_project 9 52694681 52706146 - MGP_CBAJ_P0091770 AU019823 protein_coding unknown_likely_coding MGP_CBAJ_T0091771.1 MGP_CBAJ_G0034438.1 mouse_genomes_project 9 52696754 52707862 - MGP_CBAJ_P0091771 AU019823 protein_coding protein_coding MGP_CBAJ_T0091772.1 MGP_CBAJ_G0034438.1 mouse_genomes_project 9 52696863 52707876 - MGP_CBAJ_P0091772 AU019823 protein_coding protein_coding MGP_CBAJ_T0091773.1 MGP_CBAJ_G0034438.1 mouse_genomes_project 9 52696896 52707859 - MGP_CBAJ_P0091773 AU019823 protein_coding protein_coding MGP_CBAJ_T0090766.1 MGP_CBAJ_G0034028.1 mouse_genomes_project 9 16555639 16577361 + MGP_CBAJ_P0090766 Chordc1 protein_coding protein_coding MGP_CBAJ_T0100846.1 MGP_CBAJ_G0039101.1 mouse_genomes_project 9 13286528 13286651 + Gm25500 snoRNA snoRNA MGP_CBAJ_T0011610.1 MGP_CBAJ_G0009748.1 mouse_genomes_project 9 56975750 56975968 + Gm25980 misc_RNA misc_RNA MGP_CBAJ_T0015890.1 MGP_CBAJ_G0014002.1 mouse_genomes_project 9 103043224 103043813 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0091694.1 MGP_CBAJ_G0034405.1 mouse_genomes_project 9 47836791 47839567 + MGP_CBAJ_P0091694 Apoa4 protein_coding protein_coding MGP_CBAJ_T0011606.1 MGP_CBAJ_G0009744.1 mouse_genomes_project 9 19409482 19409803 + Gm26274 misc_RNA misc_RNA MGP_CBAJ_T0093924.1 MGP_CBAJ_G0034927.1 mouse_genomes_project 9 116862093 116862660 + Uba7 protein_coding processed_transcript MGP_CBAJ_T0093925.1 MGP_CBAJ_G0034927.1 mouse_genomes_project 9 116862122 116870627 + MGP_CBAJ_P0093925 Uba7 protein_coding protein_coding MGP_CBAJ_T0093926.1 MGP_CBAJ_G0034927.1 mouse_genomes_project 9 116862158 116870627 + Uba7 protein_coding retained_intron MGP_CBAJ_T0093927.1 MGP_CBAJ_G0034927.1 mouse_genomes_project 9 116862163 116870627 + Uba7 protein_coding retained_intron MGP_CBAJ_T0093928.1 MGP_CBAJ_G0034927.1 mouse_genomes_project 9 116862170 116867076 + Uba7 protein_coding retained_intron MGP_CBAJ_T0093929.1 MGP_CBAJ_G0034927.1 mouse_genomes_project 9 116862194 116862739 + Uba7 protein_coding processed_transcript MGP_CBAJ_T0093930.1 MGP_CBAJ_G0034927.1 mouse_genomes_project 9 116862194 116870627 + Uba7 protein_coding retained_intron MGP_CBAJ_T0093931.1 MGP_CBAJ_G0034927.1 mouse_genomes_project 9 116862243 116870629 + MGP_CBAJ_P0093931 Uba7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093932.1 MGP_CBAJ_G0034927.1 mouse_genomes_project 9 116862544 116870631 + MGP_CBAJ_P0093932 Uba7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093933.1 MGP_CBAJ_G0034927.1 mouse_genomes_project 9 116862896 116863555 + Uba7 protein_coding retained_intron MGP_CBAJ_T0093934.1 MGP_CBAJ_G0034927.1 mouse_genomes_project 9 116863479 116864113 + Uba7 protein_coding retained_intron MGP_CBAJ_T0093935.1 MGP_CBAJ_G0034927.1 mouse_genomes_project 9 116866316 116869357 + Uba7 protein_coding retained_intron MGP_CBAJ_T0093936.1 MGP_CBAJ_G0034927.1 mouse_genomes_project 9 116867467 116869770 + Uba7 protein_coding retained_intron MGP_CBAJ_T0093937.1 MGP_CBAJ_G0034927.1 mouse_genomes_project 9 116869595 116870624 + Uba7 protein_coding retained_intron MGP_CBAJ_T0093938.1 MGP_CBAJ_G0034927.1 mouse_genomes_project 9 116869605 116870522 + Uba7 protein_coding retained_intron MGP_CBAJ_T0091622.1 MGP_CBAJ_G0034384.1 mouse_genomes_project 9 46547492 46581497 + MGP_CBAJ_P0091622 Amica1 protein_coding protein_coding MGP_CBAJ_T0005377.1 MGP_CBAJ_G0004543.1 mouse_genomes_project 9 61040854 61042029 + Gm16131 antisense antisense MGP_CBAJ_T0099624.1 MGP_CBAJ_G0037879.1 mouse_genomes_project 9 77325685 77325792 + Gm23057 snRNA snRNA MGP_CBAJ_T0015835.1 MGP_CBAJ_G0013947.1 mouse_genomes_project 9 77803823 77804130 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0094089.1 MGP_CBAJ_G0034953.1 mouse_genomes_project 9 117477597 117485744 + MGP_CBAJ_P0094089 Qars protein_coding protein_coding MGP_CBAJ_T0094090.1 MGP_CBAJ_G0034953.1 mouse_genomes_project 9 117477942 117480895 + Qars protein_coding retained_intron MGP_CBAJ_T0094091.1 MGP_CBAJ_G0034953.1 mouse_genomes_project 9 117477942 117482005 + Qars protein_coding retained_intron MGP_CBAJ_T0094092.1 MGP_CBAJ_G0034953.1 mouse_genomes_project 9 117477942 117480879 + Qars protein_coding retained_intron MGP_CBAJ_T0094093.1 MGP_CBAJ_G0034953.1 mouse_genomes_project 9 117477955 117485739 + MGP_CBAJ_P0094093 Qars protein_coding protein_coding MGP_CBAJ_T0094094.1 MGP_CBAJ_G0034953.1 mouse_genomes_project 9 117479363 117485739 + MGP_CBAJ_P0094094 Qars protein_coding protein_coding MGP_CBAJ_T0094095.1 MGP_CBAJ_G0034953.1 mouse_genomes_project 9 117481356 117483200 + Qars protein_coding retained_intron MGP_CBAJ_T0094096.1 MGP_CBAJ_G0034953.1 mouse_genomes_project 9 117481416 117482699 + Qars protein_coding retained_intron MGP_CBAJ_T0094097.1 MGP_CBAJ_G0034953.1 mouse_genomes_project 9 117482908 117483989 + Qars protein_coding retained_intron MGP_CBAJ_T0094098.1 MGP_CBAJ_G0034953.1 mouse_genomes_project 9 117482911 117484961 + MGP_CBAJ_P0094098 Qars protein_coding protein_coding MGP_CBAJ_T0094099.1 MGP_CBAJ_G0034953.1 mouse_genomes_project 9 117482932 117483766 + Qars protein_coding processed_transcript MGP_CBAJ_T0094100.1 MGP_CBAJ_G0034953.1 mouse_genomes_project 9 117483346 117483933 + Qars protein_coding retained_intron MGP_CBAJ_T0094101.1 MGP_CBAJ_G0034953.1 mouse_genomes_project 9 117483528 117484161 + Qars protein_coding retained_intron MGP_CBAJ_T0094102.1 MGP_CBAJ_G0034953.1 mouse_genomes_project 9 117483866 117485739 + MGP_CBAJ_P0094102 Qars protein_coding nonsense_mediated_decay MGP_CBAJ_T0094103.1 MGP_CBAJ_G0034953.1 mouse_genomes_project 9 117484550 117484998 + Qars protein_coding retained_intron MGP_CBAJ_T0094104.1 MGP_CBAJ_G0034953.1 mouse_genomes_project 9 117484553 117485732 + Qars protein_coding retained_intron MGP_CBAJ_T0094105.1 MGP_CBAJ_G0034953.1 mouse_genomes_project 9 117484621 117485739 + Qars protein_coding retained_intron MGP_CBAJ_T0094288.1 MGP_CBAJ_G0034985.1 mouse_genomes_project 9 118861906 118904641 - MGP_CBAJ_P0094288 Fbxw24 protein_coding protein_coding MGP_CBAJ_T0090981.1 MGP_CBAJ_G0034124.1 mouse_genomes_project 9 20775854 20780532 - MGP_CBAJ_P0090981 Epor protein_coding protein_coding MGP_CBAJ_T0090982.1 MGP_CBAJ_G0034124.1 mouse_genomes_project 9 20776014 20779600 - MGP_CBAJ_P0090982 Epor protein_coding unknown_likely_coding MGP_CBAJ_T0090627.1 MGP_CBAJ_G0033985.1 mouse_genomes_project 9 4978147 5002375 - MGP_CBAJ_P0090627 Birc2 protein_coding protein_coding MGP_CBAJ_T0090628.1 MGP_CBAJ_G0033985.1 mouse_genomes_project 9 4978156 5000592 - MGP_CBAJ_P0090628 Birc2 protein_coding protein_coding MGP_CBAJ_T0090629.1 MGP_CBAJ_G0033985.1 mouse_genomes_project 9 5000120 5002123 - Birc2 protein_coding processed_transcript MGP_CBAJ_T0090630.1 MGP_CBAJ_G0033985.1 mouse_genomes_project 9 5001084 5002381 - Birc2 protein_coding retained_intron MGP_CBAJ_T0090631.1 MGP_CBAJ_G0033985.1 mouse_genomes_project 9 5002004 5002382 - MGP_CBAJ_P0090631 Birc2 protein_coding protein_coding MGP_CBAJ_T0092124.1 MGP_CBAJ_G0034544.1 mouse_genomes_project 9 61336334 61347165 - MGP_CBAJ_P0092124 Tbc1d21 protein_coding protein_coding MGP_CBAJ_T0094131.1 MGP_CBAJ_G0034957.1 mouse_genomes_project 9 117558133 117561022 + MGP_CBAJ_P0094131 Dalrd3 protein_coding protein_coding MGP_CBAJ_T0094132.1 MGP_CBAJ_G0034957.1 mouse_genomes_project 9 117558157 117559767 + MGP_CBAJ_P0094132 Dalrd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094133.1 MGP_CBAJ_G0034957.1 mouse_genomes_project 9 117558161 117558934 + Dalrd3 protein_coding retained_intron MGP_CBAJ_T0094134.1 MGP_CBAJ_G0034957.1 mouse_genomes_project 9 117558943 117560229 + Dalrd3 protein_coding retained_intron MGP_CBAJ_T0094135.1 MGP_CBAJ_G0034957.1 mouse_genomes_project 9 117559254 117560088 + Dalrd3 protein_coding retained_intron MGP_CBAJ_T0094136.1 MGP_CBAJ_G0034957.1 mouse_genomes_project 9 117559484 117561021 + Dalrd3 protein_coding retained_intron MGP_CBAJ_T0094137.1 MGP_CBAJ_G0034957.1 mouse_genomes_project 9 117559765 117560779 + MGP_CBAJ_P0094137 Dalrd3 protein_coding protein_coding MGP_CBAJ_T0094138.1 MGP_CBAJ_G0034957.1 mouse_genomes_project 9 117560514 117561019 + Dalrd3 protein_coding retained_intron MGP_CBAJ_T0094140.1 MGP_CBAJ_G0034957.1 mouse_genomes_project 9 117560639 117560903 + MGP_CBAJ_P0094140 Dalrd3 protein_coding protein_coding MGP_CBAJ_T0094235.1 MGP_CBAJ_G0034972.1 mouse_genomes_project 9 118037655 118054036 + MGP_CBAJ_P0094235 Shisa5 protein_coding protein_coding MGP_CBAJ_T0094236.1 MGP_CBAJ_G0034972.1 mouse_genomes_project 9 118037675 118053983 + MGP_CBAJ_P0094236 Shisa5 protein_coding protein_coding MGP_CBAJ_T0094237.1 MGP_CBAJ_G0034972.1 mouse_genomes_project 9 118037692 118053983 + Shisa5 protein_coding retained_intron MGP_CBAJ_T0094238.1 MGP_CBAJ_G0034972.1 mouse_genomes_project 9 118039502 118053002 + MGP_CBAJ_P0094238 Shisa5 protein_coding protein_coding MGP_CBAJ_T0094239.1 MGP_CBAJ_G0034972.1 mouse_genomes_project 9 118039693 118047649 + MGP_CBAJ_P0094239 Shisa5 protein_coding protein_coding MGP_CBAJ_T0094240.1 MGP_CBAJ_G0034972.1 mouse_genomes_project 9 118047354 118053214 + MGP_CBAJ_P0094240 Shisa5 protein_coding protein_coding MGP_CBAJ_T0094241.1 MGP_CBAJ_G0034972.1 mouse_genomes_project 9 118047413 118052637 + MGP_CBAJ_P0094241 Shisa5 protein_coding protein_coding MGP_CBAJ_T0094242.1 MGP_CBAJ_G0034972.1 mouse_genomes_project 9 118047417 118053283 + MGP_CBAJ_P0094242 Shisa5 protein_coding protein_coding MGP_CBAJ_T0094243.1 MGP_CBAJ_G0034972.1 mouse_genomes_project 9 118047438 118052611 + MGP_CBAJ_P0094243 Shisa5 protein_coding protein_coding MGP_CBAJ_T0094244.1 MGP_CBAJ_G0034972.1 mouse_genomes_project 9 118047456 118053272 + MGP_CBAJ_P0094244 Shisa5 protein_coding protein_coding MGP_CBAJ_T0094245.1 MGP_CBAJ_G0034972.1 mouse_genomes_project 9 118047458 118052670 + MGP_CBAJ_P0094245 Shisa5 protein_coding protein_coding MGP_CBAJ_T0094246.1 MGP_CBAJ_G0034972.1 mouse_genomes_project 9 118047460 118052990 + MGP_CBAJ_P0094246 Shisa5 protein_coding protein_coding MGP_CBAJ_T0094247.1 MGP_CBAJ_G0034972.1 mouse_genomes_project 9 118047469 118052633 + MGP_CBAJ_P0094247 Shisa5 protein_coding protein_coding MGP_CBAJ_T0094248.1 MGP_CBAJ_G0034972.1 mouse_genomes_project 9 118047693 118053117 + MGP_CBAJ_P0094248 Shisa5 protein_coding protein_coding MGP_CBAJ_T0094249.1 MGP_CBAJ_G0034972.1 mouse_genomes_project 9 118049125 118052961 + Shisa5 protein_coding processed_transcript MGP_CBAJ_T0094250.1 MGP_CBAJ_G0034972.1 mouse_genomes_project 9 118051139 118053466 + MGP_CBAJ_P0094250 Shisa5 protein_coding protein_coding MGP_CBAJ_T0094251.1 MGP_CBAJ_G0034972.1 mouse_genomes_project 9 118051224 118052810 + Shisa5 protein_coding processed_transcript MGP_CBAJ_T0094252.1 MGP_CBAJ_G0034972.1 mouse_genomes_project 9 118051288 118052750 + Shisa5 protein_coding processed_transcript MGP_CBAJ_T0094253.1 MGP_CBAJ_G0034972.1 mouse_genomes_project 9 118052198 118052734 + Shisa5 protein_coding retained_intron MGP_CBAJ_T0015860.1 MGP_CBAJ_G0013972.1 mouse_genomes_project 9 89560920 89561326 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100890.1 MGP_CBAJ_G0039145.1 mouse_genomes_project 9 79691805 79691948 + Gm22315 snoRNA snoRNA MGP_CBAJ_T0092392.1 MGP_CBAJ_G0034621.1 mouse_genomes_project 9 69750932 69813253 - MGP_CBAJ_P0092392 Trip4 protein_coding protein_coding MGP_CBAJ_T0092393.1 MGP_CBAJ_G0034621.1 mouse_genomes_project 9 69760951 69776422 - Trip4 protein_coding retained_intron MGP_CBAJ_T0092394.1 MGP_CBAJ_G0034621.1 mouse_genomes_project 9 69809116 69842327 - MGP_CBAJ_P0092394 Trip4 protein_coding protein_coding MGP_CBAJ_T0092397.1 MGP_CBAJ_G0034621.1 mouse_genomes_project 9 69825226 69842260 - Trip4 protein_coding processed_transcript MGP_CBAJ_T0092398.1 MGP_CBAJ_G0034621.1 mouse_genomes_project 9 69825564 69842327 - Trip4 protein_coding processed_transcript MGP_CBAJ_T0092399.1 MGP_CBAJ_G0034621.1 mouse_genomes_project 9 69826030 69842335 - Trip4 protein_coding processed_transcript MGP_CBAJ_T0092400.1 MGP_CBAJ_G0034621.1 mouse_genomes_project 9 69828948 69842327 - Trip4 protein_coding retained_intron MGP_CBAJ_T0091766.1 MGP_CBAJ_G0034436.1 mouse_genomes_project 9 52685533 52693045 - MGP_CBAJ_P0091766 Sdhd protein_coding protein_coding MGP_CBAJ_T0005425.1 MGP_CBAJ_G0004574.1 mouse_genomes_project 9 104566959 104573033 + Gm16010 antisense antisense MGP_CBAJ_T0005426.1 MGP_CBAJ_G0004574.1 mouse_genomes_project 9 104568467 104569439 + Gm16010 antisense antisense MGP_CBAJ_T0002367.1 MGP_CBAJ_G0002279.1 mouse_genomes_project 9 95583758 95584772 - TEC TEC MGP_CBAJ_T0002419.1 MGP_CBAJ_G0002331.1 mouse_genomes_project 9 116676648 116677647 - TEC TEC MGP_CBAJ_T0009189.1 MGP_CBAJ_G0007374.1 mouse_genomes_project 9 96811314 96812968 + Gm26882 lincRNA lincRNA MGP_CBAJ_T0094800.1 MGP_CBAJ_G0035107.1 mouse_genomes_project 9 133034071 133046024 + MGP_CBAJ_P0094800 1700048O20Rik protein_coding protein_coding MGP_CBAJ_T0099646.1 MGP_CBAJ_G0037901.1 mouse_genomes_project 9 125031416 125031520 + Gm23889 snRNA snRNA MGP_CBAJ_T0091681.1 MGP_CBAJ_G0034401.1 mouse_genomes_project 9 47529597 47550945 - MGP_CBAJ_P0091681 Pafah1b2 protein_coding protein_coding MGP_CBAJ_T0009247.1 MGP_CBAJ_G0007420.1 mouse_genomes_project 9 133441423 133446040 - Gm26797 lincRNA lincRNA MGP_CBAJ_T0005479.1 MGP_CBAJ_G0004616.1 mouse_genomes_project 9 132617406 132637749 + Lyzl4os antisense antisense MGP_CBAJ_T0005480.1 MGP_CBAJ_G0004616.1 mouse_genomes_project 9 132617429 132654071 + Lyzl4os antisense antisense MGP_CBAJ_T0091552.1 MGP_CBAJ_G0034367.1 mouse_genomes_project 9 45867888 45898940 + MGP_CBAJ_P0091552 Bcl9l protein_coding unknown_likely_coding MGP_CBAJ_T0002314.1 MGP_CBAJ_G0002227.1 mouse_genomes_project 9 32357217 32359146 - TEC TEC MGP_CBAJ_T0091407.1 MGP_CBAJ_G0034320.1 mouse_genomes_project 9 40980127 41004719 + MGP_CBAJ_P0091407 Zfp202 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091408.1 MGP_CBAJ_G0034320.1 mouse_genomes_project 9 40980128 41004304 + MGP_CBAJ_P0091408 Zfp202 protein_coding protein_coding MGP_CBAJ_T0091409.1 MGP_CBAJ_G0034320.1 mouse_genomes_project 9 40980140 41004304 + MGP_CBAJ_P0091409 Zfp202 protein_coding protein_coding MGP_CBAJ_T0005423.1 MGP_CBAJ_G0004572.1 mouse_genomes_project 9 103444660 103458189 - Gm28085 antisense antisense MGP_CBAJ_T0093216.1 MGP_CBAJ_G0034796.1 mouse_genomes_project 9 103955146 103965550 - MGP_CBAJ_P0093216 protein_coding protein_coding MGP_CBAJ_T0093217.1 MGP_CBAJ_G0034796.1 mouse_genomes_project 9 103960552 103965463 - protein_coding processed_transcript MGP_CBAJ_T0018291.1 MGP_CBAJ_G0015487.1 mouse_genomes_project 9 85459185 85468780 + 4930429F24Rik processed_transcript processed_transcript MGP_CBAJ_T0094160.1 MGP_CBAJ_G0034961.1 mouse_genomes_project 9 117678488 117680775 + Slc25a20 protein_coding retained_intron MGP_CBAJ_T0094161.1 MGP_CBAJ_G0034961.1 mouse_genomes_project 9 117678498 117701366 + MGP_CBAJ_P0094161 Slc25a20 protein_coding protein_coding MGP_CBAJ_T0094162.1 MGP_CBAJ_G0034961.1 mouse_genomes_project 9 117689392 117697482 + Slc25a20 protein_coding retained_intron MGP_CBAJ_T0091617.1 MGP_CBAJ_G0034383.1 mouse_genomes_project 9 46523493 46545746 + MGP_CBAJ_P0091617 Mpzl3 protein_coding protein_coding MGP_CBAJ_T0091618.1 MGP_CBAJ_G0034383.1 mouse_genomes_project 9 46523495 46533475 + Mpzl3 protein_coding retained_intron MGP_CBAJ_T0091619.1 MGP_CBAJ_G0034383.1 mouse_genomes_project 9 46523516 46534771 + MGP_CBAJ_P0091619 Mpzl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091620.1 MGP_CBAJ_G0034383.1 mouse_genomes_project 9 46527554 46533959 + Mpzl3 protein_coding retained_intron MGP_CBAJ_T0091621.1 MGP_CBAJ_G0034383.1 mouse_genomes_project 9 46538910 46543470 + Mpzl3 protein_coding retained_intron MGP_CBAJ_T0094073.1 MGP_CBAJ_G0034952.1 mouse_genomes_project 9 117454497 117465580 + MGP_CBAJ_P0094073 Usp19 protein_coding protein_coding MGP_CBAJ_T0094074.1 MGP_CBAJ_G0034952.1 mouse_genomes_project 9 117454735 117466218 + MGP_CBAJ_P0094074 Usp19 protein_coding protein_coding MGP_CBAJ_T0094075.1 MGP_CBAJ_G0034952.1 mouse_genomes_project 9 117454740 117466198 + MGP_CBAJ_P0094075 Usp19 protein_coding protein_coding MGP_CBAJ_T0094076.1 MGP_CBAJ_G0034952.1 mouse_genomes_project 9 117454740 117466198 + MGP_CBAJ_P0094076 Usp19 protein_coding protein_coding MGP_CBAJ_T0094077.1 MGP_CBAJ_G0034952.1 mouse_genomes_project 9 117454751 117466198 + MGP_CBAJ_P0094077 Usp19 protein_coding protein_coding MGP_CBAJ_T0094078.1 MGP_CBAJ_G0034952.1 mouse_genomes_project 9 117456588 117458814 + Usp19 protein_coding retained_intron MGP_CBAJ_T0094079.1 MGP_CBAJ_G0034952.1 mouse_genomes_project 9 117457362 117458124 + MGP_CBAJ_P0094079 Usp19 protein_coding protein_coding MGP_CBAJ_T0094080.1 MGP_CBAJ_G0034952.1 mouse_genomes_project 9 117458231 117459084 + Usp19 protein_coding retained_intron MGP_CBAJ_T0094081.1 MGP_CBAJ_G0034952.1 mouse_genomes_project 9 117458260 117459347 + Usp19 protein_coding retained_intron MGP_CBAJ_T0094082.1 MGP_CBAJ_G0034952.1 mouse_genomes_project 9 117458521 117465580 + MGP_CBAJ_P0094082 Usp19 protein_coding protein_coding MGP_CBAJ_T0094083.1 MGP_CBAJ_G0034952.1 mouse_genomes_project 9 117459422 117460352 + Usp19 protein_coding retained_intron MGP_CBAJ_T0094084.1 MGP_CBAJ_G0034952.1 mouse_genomes_project 9 117460235 117462436 + Usp19 protein_coding retained_intron MGP_CBAJ_T0094085.1 MGP_CBAJ_G0034952.1 mouse_genomes_project 9 117460867 117462598 + Usp19 protein_coding retained_intron MGP_CBAJ_T0094086.1 MGP_CBAJ_G0034952.1 mouse_genomes_project 9 117460967 117463076 + MGP_CBAJ_P0094086 Usp19 protein_coding protein_coding MGP_CBAJ_T0094087.1 MGP_CBAJ_G0034952.1 mouse_genomes_project 9 117462581 117463499 + Usp19 protein_coding retained_intron MGP_CBAJ_T0094088.1 MGP_CBAJ_G0034952.1 mouse_genomes_project 9 117464030 117465578 + Usp19 protein_coding retained_intron MGP_CBAJ_T0091286.1 MGP_CBAJ_G0034221.1 mouse_genomes_project 9 37879669 37921547 + MGP_CBAJ_P0091286 Msantd2 protein_coding protein_coding MGP_CBAJ_T0090988.1 MGP_CBAJ_G0034128.1 mouse_genomes_project 9 20843359 20885692 - MGP_CBAJ_P0090988 Elavl3 protein_coding protein_coding MGP_CBAJ_T0090989.1 MGP_CBAJ_G0034128.1 mouse_genomes_project 9 20853466 20870485 - MGP_CBAJ_P0090989 Elavl3 protein_coding unknown_likely_coding MGP_CBAJ_T0091325.1 MGP_CBAJ_G0034250.1 mouse_genomes_project 9 38918665 38919661 + MGP_CBAJ_P0091325 Olfr250 protein_coding protein_coding MGP_CBAJ_T0091392.1 MGP_CBAJ_G0034305.1 mouse_genomes_project 9 40570431 40573023 + MGP_CBAJ_P0091392 Olfr970 protein_coding protein_coding MGP_CBAJ_T0011624.1 MGP_CBAJ_G0009762.1 mouse_genomes_project 9 131725496 131725817 - Gm23624 misc_RNA misc_RNA MGP_CBAJ_T0091204.1 MGP_CBAJ_G0034196.1 mouse_genomes_project 9 35730733 35733818 - MGP_CBAJ_P0091204 Pate3 protein_coding protein_coding MGP_CBAJ_T0091898.1 MGP_CBAJ_G0034475.1 mouse_genomes_project 9 56575367 56602494 - MGP_CBAJ_P0091898 Cyp19a1 protein_coding protein_coding MGP_CBAJ_T0092049.1 MGP_CBAJ_G0034523.1 mouse_genomes_project 9 60379545 60388057 - MGP_CBAJ_P0092049 Mpi protein_coding protein_coding MGP_CBAJ_T0092050.1 MGP_CBAJ_G0034523.1 mouse_genomes_project 9 60383555 60387560 - Mpi protein_coding retained_intron MGP_CBAJ_T0092051.1 MGP_CBAJ_G0034523.1 mouse_genomes_project 9 60383884 60384967 - Mpi protein_coding retained_intron MGP_CBAJ_T0092052.1 MGP_CBAJ_G0034523.1 mouse_genomes_project 9 60384424 60388003 - MGP_CBAJ_P0092052 Mpi protein_coding nonsense_mediated_decay MGP_CBAJ_T0092053.1 MGP_CBAJ_G0034523.1 mouse_genomes_project 9 60385270 60388010 - Mpi protein_coding retained_intron MGP_CBAJ_T0009120.1 MGP_CBAJ_G0007320.1 mouse_genomes_project 9 35592496 35594443 - lincRNA lincRNA MGP_CBAJ_T0099595.1 MGP_CBAJ_G0037850.1 mouse_genomes_project 9 32264221 32264328 - Gm22060 snRNA snRNA MGP_CBAJ_T0015822.1 MGP_CBAJ_G0013934.1 mouse_genomes_project 9 69119408 69119796 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010929.1 MGP_CBAJ_G0009067.1 mouse_genomes_project 9 42517372 42517468 + Mirlet7a-2 miRNA miRNA MGP_CBAJ_T0091011.1 MGP_CBAJ_G0034141.1 mouse_genomes_project 9 21343198 21363238 - MGP_CBAJ_P0091011 Rp9 protein_coding protein_coding MGP_CBAJ_T0010923.1 MGP_CBAJ_G0009061.1 mouse_genomes_project 9 20603133 20603193 - Mir7083 miRNA miRNA MGP_CBAJ_T0094832.1 MGP_CBAJ_G0035120.1 mouse_genomes_project 9 134150013 134232325 + MGP_CBAJ_P0094832 Kif15 protein_coding protein_coding MGP_CBAJ_T0098114.1 MGP_CBAJ_G0036387.1 mouse_genomes_project 9 37360557 37360666 + n-R5s82 rRNA rRNA MGP_CBAJ_T0092951.1 MGP_CBAJ_G0034743.1 mouse_genomes_project 9 89951647 89992762 + Ttk protein_coding retained_intron MGP_CBAJ_T0092952.1 MGP_CBAJ_G0034743.1 mouse_genomes_project 9 89951648 89995662 + MGP_CBAJ_P0092952 Ttk protein_coding protein_coding MGP_CBAJ_T0092953.1 MGP_CBAJ_G0034743.1 mouse_genomes_project 9 89951675 89995659 + MGP_CBAJ_P0092953 Ttk protein_coding protein_coding MGP_CBAJ_T0092954.1 MGP_CBAJ_G0034743.1 mouse_genomes_project 9 89951691 89954459 + Ttk protein_coding retained_intron MGP_CBAJ_T0092955.1 MGP_CBAJ_G0034743.1 mouse_genomes_project 9 89951698 89963445 + Ttk protein_coding processed_transcript MGP_CBAJ_T0092956.1 MGP_CBAJ_G0034743.1 mouse_genomes_project 9 89951723 89962106 + MGP_CBAJ_P0092956 Ttk protein_coding protein_coding MGP_CBAJ_T0092957.1 MGP_CBAJ_G0034743.1 mouse_genomes_project 9 89952737 89995341 + MGP_CBAJ_P0092957 Ttk protein_coding unknown_likely_coding MGP_CBAJ_T0093166.1 MGP_CBAJ_G0034789.1 mouse_genomes_project 9 103074956 103123582 - MGP_CBAJ_P0093166 Trpc1 protein_coding protein_coding MGP_CBAJ_T0093167.1 MGP_CBAJ_G0034789.1 mouse_genomes_project 9 103076501 103123582 - MGP_CBAJ_P0093167 Trpc1 protein_coding protein_coding MGP_CBAJ_T0093168.1 MGP_CBAJ_G0034789.1 mouse_genomes_project 9 103076501 103123582 - MGP_CBAJ_P0093168 Trpc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093169.1 MGP_CBAJ_G0034789.1 mouse_genomes_project 9 103076501 103123582 - MGP_CBAJ_P0093169 Trpc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093170.1 MGP_CBAJ_G0034789.1 mouse_genomes_project 9 103085505 103088613 - Trpc1 protein_coding retained_intron MGP_CBAJ_T0093171.1 MGP_CBAJ_G0034789.1 mouse_genomes_project 9 103091213 103103474 - MGP_CBAJ_P0093171 Trpc1 protein_coding protein_coding MGP_CBAJ_T0093172.1 MGP_CBAJ_G0034789.1 mouse_genomes_project 9 103122261 103123599 - Trpc1 protein_coding retained_intron MGP_CBAJ_T0098217.1 MGP_CBAJ_G0036490.1 mouse_genomes_project 9 67954019 67954154 + Gm24289 scaRNA scaRNA MGP_CBAJ_T0091013.1 MGP_CBAJ_G0034143.1 mouse_genomes_project 9 21370929 21823711 + MGP_CBAJ_P0091013 Bbs9 protein_coding protein_coding MGP_CBAJ_T0091014.1 MGP_CBAJ_G0034143.1 mouse_genomes_project 9 21370936 21823705 + MGP_CBAJ_P0091014 Bbs9 protein_coding protein_coding MGP_CBAJ_T0091015.1 MGP_CBAJ_G0034143.1 mouse_genomes_project 9 21370945 21413998 + MGP_CBAJ_P0091015 Bbs9 protein_coding protein_coding MGP_CBAJ_T0091016.1 MGP_CBAJ_G0034143.1 mouse_genomes_project 9 21370945 21823705 + MGP_CBAJ_P0091016 Bbs9 protein_coding protein_coding MGP_CBAJ_T0091017.1 MGP_CBAJ_G0034143.1 mouse_genomes_project 9 21371081 21414044 + MGP_CBAJ_P0091017 Bbs9 protein_coding protein_coding MGP_CBAJ_T0091018.1 MGP_CBAJ_G0034143.1 mouse_genomes_project 9 21388573 21823711 + MGP_CBAJ_P0091018 Bbs9 protein_coding protein_coding MGP_CBAJ_T0091019.1 MGP_CBAJ_G0034143.1 mouse_genomes_project 9 21412407 21484879 + Bbs9 protein_coding processed_transcript MGP_CBAJ_T0091020.1 MGP_CBAJ_G0034143.1 mouse_genomes_project 9 21479785 21535768 + Bbs9 protein_coding processed_transcript MGP_CBAJ_T0091021.1 MGP_CBAJ_G0034143.1 mouse_genomes_project 9 21542435 21823711 + MGP_CBAJ_P0091021 Bbs9 protein_coding protein_coding MGP_CBAJ_T0091022.1 MGP_CBAJ_G0034143.1 mouse_genomes_project 9 21550347 21823711 + MGP_CBAJ_P0091022 Bbs9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091023.1 MGP_CBAJ_G0034143.1 mouse_genomes_project 9 21567538 21594625 + Bbs9 protein_coding retained_intron MGP_CBAJ_T0091024.1 MGP_CBAJ_G0034143.1 mouse_genomes_project 9 21592861 21823705 + Bbs9 protein_coding retained_intron MGP_CBAJ_T0091335.1 MGP_CBAJ_G0034260.1 mouse_genomes_project 9 39102309 39104628 + MGP_CBAJ_P0091335 protein_coding protein_coding MGP_CBAJ_T0094895.1 MGP_CBAJ_G0035143.1 mouse_genomes_project 9 135724538 135752343 - MGP_CBAJ_P0094895 2010315B03Rik protein_coding protein_coding MGP_CBAJ_T0094896.1 MGP_CBAJ_G0035143.1 mouse_genomes_project 9 135726356 135752289 - MGP_CBAJ_P0094896 2010315B03Rik protein_coding protein_coding MGP_CBAJ_T0094897.1 MGP_CBAJ_G0035143.1 mouse_genomes_project 9 135726546 135751550 - MGP_CBAJ_P0094897 2010315B03Rik protein_coding protein_coding MGP_CBAJ_T0094898.1 MGP_CBAJ_G0035143.1 mouse_genomes_project 9 135726558 135752318 - MGP_CBAJ_P0094898 2010315B03Rik protein_coding protein_coding MGP_CBAJ_T0094899.1 MGP_CBAJ_G0035143.1 mouse_genomes_project 9 135735802 135752318 - 2010315B03Rik protein_coding processed_transcript MGP_CBAJ_T0090963.1 MGP_CBAJ_G0034114.1 mouse_genomes_project 9 20492358 20522938 + MGP_CBAJ_P0090963 Ldlr protein_coding protein_coding MGP_CBAJ_T0091395.1 MGP_CBAJ_G0034308.1 mouse_genomes_project 9 40652778 40653702 + MGP_CBAJ_P0091395 Olfr229 protein_coding protein_coding MGP_CBAJ_T0092385.1 MGP_CBAJ_G0034619.1 mouse_genomes_project 9 69569888 69595730 + protein_coding processed_transcript MGP_CBAJ_T0092386.1 MGP_CBAJ_G0034619.1 mouse_genomes_project 9 69571535 69594673 + protein_coding processed_transcript MGP_CBAJ_T0092387.1 MGP_CBAJ_G0034619.1 mouse_genomes_project 9 69578775 69595395 + protein_coding retained_intron MGP_CBAJ_T0092388.1 MGP_CBAJ_G0034619.1 mouse_genomes_project 9 69578787 69595386 + MGP_CBAJ_P0092388 protein_coding protein_coding MGP_CBAJ_T0009183.1 MGP_CBAJ_G0007370.1 mouse_genomes_project 9 91001007 91012256 + 4930554C24Rik lincRNA lincRNA MGP_CBAJ_T0093848.1 MGP_CBAJ_G0034918.1 mouse_genomes_project 9 116517947 116523200 - MGP_CBAJ_P0093848 Gnat1 protein_coding protein_coding MGP_CBAJ_T0093849.1 MGP_CBAJ_G0034918.1 mouse_genomes_project 9 116517950 116523122 - Gnat1 protein_coding retained_intron MGP_CBAJ_T0093850.1 MGP_CBAJ_G0034918.1 mouse_genomes_project 9 116518770 116519915 - Gnat1 protein_coding retained_intron MGP_CBAJ_T0093851.1 MGP_CBAJ_G0034918.1 mouse_genomes_project 9 116519718 116521913 - Gnat1 protein_coding processed_transcript MGP_CBAJ_T0093852.1 MGP_CBAJ_G0034918.1 mouse_genomes_project 9 116520408 116523102 - Gnat1 protein_coding retained_intron MGP_CBAJ_T0009185.1 MGP_CBAJ_G0007372.1 mouse_genomes_project 9 96484765 96487965 + 1700017I07Rik lincRNA lincRNA MGP_CBAJ_T0002309.1 MGP_CBAJ_G0002222.1 mouse_genomes_project 9 23774343 23776192 - TEC TEC MGP_CBAJ_T0091355.1 MGP_CBAJ_G0034274.1 mouse_genomes_project 9 39528929 39533014 + MGP_CBAJ_P0091355 protein_coding protein_coding MGP_CBAJ_T0093218.1 MGP_CBAJ_G0034797.1 mouse_genomes_project 9 104042009 104141618 - MGP_CBAJ_P0093218 Rasa2 protein_coding protein_coding MGP_CBAJ_T0093219.1 MGP_CBAJ_G0034797.1 mouse_genomes_project 9 104045014 104047889 - Rasa2 protein_coding retained_intron MGP_CBAJ_T0093220.1 MGP_CBAJ_G0034797.1 mouse_genomes_project 9 104048991 104141537 - MGP_CBAJ_P0093220 Rasa2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093221.1 MGP_CBAJ_G0034797.1 mouse_genomes_project 9 104060479 104076191 - Rasa2 protein_coding retained_intron MGP_CBAJ_T0093222.1 MGP_CBAJ_G0034797.1 mouse_genomes_project 9 104061185 104067763 - Rasa2 protein_coding retained_intron MGP_CBAJ_T0093223.1 MGP_CBAJ_G0034797.1 mouse_genomes_project 9 104076035 104084754 - Rasa2 protein_coding retained_intron MGP_CBAJ_T0093905.1 MGP_CBAJ_G0034922.1 mouse_genomes_project 9 116760634 116775671 + MGP_CBAJ_P0093905 Mon1a protein_coding protein_coding MGP_CBAJ_T0093906.1 MGP_CBAJ_G0034922.1 mouse_genomes_project 9 116760665 116775676 + MGP_CBAJ_P0093906 Mon1a protein_coding protein_coding MGP_CBAJ_T0100871.1 MGP_CBAJ_G0039126.1 mouse_genomes_project 9 43411445 43411577 - Gm26272 snoRNA snoRNA MGP_CBAJ_T0099594.1 MGP_CBAJ_G0037849.1 mouse_genomes_project 9 29820265 29820372 - Gm26435 snRNA snRNA MGP_CBAJ_T0091697.1 MGP_CBAJ_G0034407.1 mouse_genomes_project 9 47875802 47886694 + MGP_CBAJ_P0091697 Zpr1 protein_coding protein_coding MGP_CBAJ_T0091698.1 MGP_CBAJ_G0034407.1 mouse_genomes_project 9 47875802 47887853 + MGP_CBAJ_P0091698 Zpr1 protein_coding protein_coding MGP_CBAJ_T0091699.1 MGP_CBAJ_G0034407.1 mouse_genomes_project 9 47875894 47878395 + MGP_CBAJ_P0091699 Zpr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091700.1 MGP_CBAJ_G0034407.1 mouse_genomes_project 9 47876237 47879343 + Zpr1 protein_coding retained_intron MGP_CBAJ_T0091701.1 MGP_CBAJ_G0034407.1 mouse_genomes_project 9 47878062 47879215 + Zpr1 protein_coding retained_intron MGP_CBAJ_T0091702.1 MGP_CBAJ_G0034407.1 mouse_genomes_project 9 47878739 47880262 + Zpr1 protein_coding retained_intron MGP_CBAJ_T0002414.1 MGP_CBAJ_G0002326.1 mouse_genomes_project 9 113675627 113677035 + TEC TEC MGP_CBAJ_T0002409.1 MGP_CBAJ_G0002321.1 mouse_genomes_project 9 111912688 111914276 - TEC TEC MGP_CBAJ_T0002336.1 MGP_CBAJ_G0002249.1 mouse_genomes_project 9 77102987 77106210 + TEC TEC MGP_CBAJ_T0091373.1 MGP_CBAJ_G0034292.1 mouse_genomes_project 9 40200110 40201046 - MGP_CBAJ_P0091373 Olfr957 protein_coding protein_coding MGP_CBAJ_T0015886.1 MGP_CBAJ_G0013998.1 mouse_genomes_project 9 101643470 101643816 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0091320.1 MGP_CBAJ_G0034245.1 mouse_genomes_project 9 38735009 38735958 + MGP_CBAJ_P0091320 Olfr894 protein_coding protein_coding MGP_CBAJ_T0010960.1 MGP_CBAJ_G0009098.1 mouse_genomes_project 9 110501514 110501566 - Mir7243 miRNA miRNA MGP_CBAJ_T0092271.1 MGP_CBAJ_G0034583.1 mouse_genomes_project 9 66947252 66951633 - 2300009A05Rik protein_coding processed_transcript MGP_CBAJ_T0092272.1 MGP_CBAJ_G0034583.1 mouse_genomes_project 9 66947252 66952047 - MGP_CBAJ_P0092272 2300009A05Rik protein_coding protein_coding MGP_CBAJ_T0092273.1 MGP_CBAJ_G0034583.1 mouse_genomes_project 9 66947253 66951633 - 2300009A05Rik protein_coding processed_transcript MGP_CBAJ_T0092274.1 MGP_CBAJ_G0034583.1 mouse_genomes_project 9 66950281 66952052 - 2300009A05Rik protein_coding retained_intron MGP_CBAJ_T0093954.1 MGP_CBAJ_G0034931.1 mouse_genomes_project 9 116882982 116941509 + Gm20662 protein_coding retained_intron MGP_CBAJ_T0093959.1 MGP_CBAJ_G0034931.1 mouse_genomes_project 9 116884622 116926862 + MGP_CBAJ_P0093959 Gm20662 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093960.1 MGP_CBAJ_G0034931.1 mouse_genomes_project 9 116884660 116926854 + MGP_CBAJ_P0093960 Gm20662 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090885.1 MGP_CBAJ_G0034087.1 mouse_genomes_project 9 19580690 19591529 - MGP_CBAJ_P0090885 S1pr2 protein_coding protein_coding MGP_CBAJ_T0092371.1 MGP_CBAJ_G0034614.1 mouse_genomes_project 9 69322338 69357506 + MGP_CBAJ_P0092371 Spg21 protein_coding protein_coding MGP_CBAJ_T0010964.1 MGP_CBAJ_G0009102.1 mouse_genomes_project 9 114825823 114825911 + Mirlet7g miRNA miRNA MGP_CBAJ_T0093834.1 MGP_CBAJ_G0034917.1 mouse_genomes_project 9 116492219 116502268 - MGP_CBAJ_P0093834 Slc38a3 protein_coding protein_coding MGP_CBAJ_T0093835.1 MGP_CBAJ_G0034917.1 mouse_genomes_project 9 116492740 116510118 - MGP_CBAJ_P0093835 Slc38a3 protein_coding protein_coding MGP_CBAJ_T0093836.1 MGP_CBAJ_G0034917.1 mouse_genomes_project 9 116492742 116511747 - Slc38a3 protein_coding retained_intron MGP_CBAJ_T0093837.1 MGP_CBAJ_G0034917.1 mouse_genomes_project 9 116492746 116510170 - MGP_CBAJ_P0093837 Slc38a3 protein_coding protein_coding MGP_CBAJ_T0093838.1 MGP_CBAJ_G0034917.1 mouse_genomes_project 9 116492746 116511712 - MGP_CBAJ_P0093838 Slc38a3 protein_coding protein_coding MGP_CBAJ_T0093839.1 MGP_CBAJ_G0034917.1 mouse_genomes_project 9 116497759 116499382 - MGP_CBAJ_P0093839 Slc38a3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093840.1 MGP_CBAJ_G0034917.1 mouse_genomes_project 9 116497789 116498969 - MGP_CBAJ_P0093840 Slc38a3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093841.1 MGP_CBAJ_G0034917.1 mouse_genomes_project 9 116497809 116498760 - Slc38a3 protein_coding retained_intron MGP_CBAJ_T0093842.1 MGP_CBAJ_G0034917.1 mouse_genomes_project 9 116499141 116500001 - Slc38a3 protein_coding retained_intron MGP_CBAJ_T0093843.1 MGP_CBAJ_G0034917.1 mouse_genomes_project 9 116499636 116501959 - Slc38a3 protein_coding processed_transcript MGP_CBAJ_T0093844.1 MGP_CBAJ_G0034917.1 mouse_genomes_project 9 116500369 116512274 - MGP_CBAJ_P0093844 Slc38a3 protein_coding protein_coding MGP_CBAJ_T0093845.1 MGP_CBAJ_G0034917.1 mouse_genomes_project 9 116500550 116511744 - MGP_CBAJ_P0093845 Slc38a3 protein_coding protein_coding MGP_CBAJ_T0093846.1 MGP_CBAJ_G0034917.1 mouse_genomes_project 9 116501375 116508205 - MGP_CBAJ_P0093846 Slc38a3 protein_coding protein_coding MGP_CBAJ_T0093847.1 MGP_CBAJ_G0034917.1 mouse_genomes_project 9 116501958 116511757 - Slc38a3 protein_coding processed_transcript MGP_CBAJ_T0009134.1 MGP_CBAJ_G0007331.1 mouse_genomes_project 9 47942829 47945854 - 4930448E22Rik lincRNA lincRNA MGP_CBAJ_T0015861.1 MGP_CBAJ_G0013973.1 mouse_genomes_project 9 90095892 90096916 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0015832.1 MGP_CBAJ_G0013944.1 mouse_genomes_project 9 77229354 77229562 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099617.1 MGP_CBAJ_G0037872.1 mouse_genomes_project 9 71191873 71192021 + Gm22145 snRNA snRNA MGP_CBAJ_T0091368.1 MGP_CBAJ_G0034287.1 mouse_genomes_project 9 39987239 39988205 - MGP_CBAJ_P0091368 Olfr948 protein_coding protein_coding MGP_CBAJ_T0002308.1 MGP_CBAJ_G0002221.1 mouse_genomes_project 9 19937878 19940574 + TEC TEC MGP_CBAJ_T0091475.1 MGP_CBAJ_G0034341.1 mouse_genomes_project 9 44983901 45054620 + MGP_CBAJ_P0091475 Nectin1 protein_coding protein_coding MGP_CBAJ_T0099630.1 MGP_CBAJ_G0037885.1 mouse_genomes_project 9 90854510 90854674 + Gm26126 snRNA snRNA MGP_CBAJ_T0092467.1 MGP_CBAJ_G0034638.1 mouse_genomes_project 9 71025336 71047769 - MGP_CBAJ_P0092467 Lactb protein_coding protein_coding MGP_CBAJ_T0091068.1 MGP_CBAJ_G0034159.1 mouse_genomes_project 9 26279732 26305087 - MGP_CBAJ_P0091068 Vps26b protein_coding protein_coding MGP_CBAJ_T0092004.1 MGP_CBAJ_G0034510.1 mouse_genomes_project 9 59689646 59742719 + MGP_CBAJ_P0092004 Snupn protein_coding protein_coding MGP_CBAJ_T0002318.1 MGP_CBAJ_G0002231.1 mouse_genomes_project 9 34562354 34585224 + TEC TEC MGP_CBAJ_T0090795.1 MGP_CBAJ_G0034045.1 mouse_genomes_project 9 17643538 17644645 - MGP_CBAJ_P0090795 Olfr843 protein_coding protein_coding MGP_CBAJ_T0092633.1 MGP_CBAJ_G0034669.1 mouse_genomes_project 9 77100233 77110875 + MGP_CBAJ_P0092633 Mns1 protein_coding protein_coding MGP_CBAJ_T0092634.1 MGP_CBAJ_G0034669.1 mouse_genomes_project 9 77100744 77118201 + MGP_CBAJ_P0092634 Mns1 protein_coding protein_coding MGP_CBAJ_T0092635.1 MGP_CBAJ_G0034669.1 mouse_genomes_project 9 77100753 77127457 + MGP_CBAJ_P0092635 Mns1 protein_coding protein_coding MGP_CBAJ_T0092636.1 MGP_CBAJ_G0034669.1 mouse_genomes_project 9 77100895 77123829 + MGP_CBAJ_P0092636 Mns1 protein_coding unknown_likely_coding MGP_CBAJ_T0092494.1 MGP_CBAJ_G0034643.1 mouse_genomes_project 9 72001524 72173803 + MGP_CBAJ_P0092494 Vps13c protein_coding protein_coding MGP_CBAJ_T0092495.1 MGP_CBAJ_G0034643.1 mouse_genomes_project 9 72001555 72161494 + MGP_CBAJ_P0092495 Vps13c protein_coding unknown_likely_coding MGP_CBAJ_T0002352.1 MGP_CBAJ_G0002265.1 mouse_genomes_project 9 82575204 82576214 - TEC TEC MGP_CBAJ_T0092082.1 MGP_CBAJ_G0034537.1 mouse_genomes_project 9 60940766 61025348 - MGP_CBAJ_P0092082 Ccdc33 protein_coding protein_coding MGP_CBAJ_T0092083.1 MGP_CBAJ_G0034537.1 mouse_genomes_project 9 60940767 61041863 - MGP_CBAJ_P0092083 Ccdc33 protein_coding protein_coding MGP_CBAJ_T0092084.1 MGP_CBAJ_G0034537.1 mouse_genomes_project 9 60940771 61025276 - MGP_CBAJ_P0092084 Ccdc33 protein_coding protein_coding MGP_CBAJ_T0092085.1 MGP_CBAJ_G0034537.1 mouse_genomes_project 9 60940808 60943066 - Ccdc33 protein_coding retained_intron MGP_CBAJ_T0092086.1 MGP_CBAJ_G0034537.1 mouse_genomes_project 9 60945323 60961567 - Ccdc33 protein_coding processed_transcript MGP_CBAJ_T0092088.1 MGP_CBAJ_G0034537.1 mouse_genomes_project 9 60990520 61037400 - Ccdc33 protein_coding processed_transcript MGP_CBAJ_T0092089.1 MGP_CBAJ_G0034537.1 mouse_genomes_project 9 61000025 61005082 - Ccdc33 protein_coding retained_intron MGP_CBAJ_T0092092.1 MGP_CBAJ_G0034537.1 mouse_genomes_project 9 61009382 61025348 - Ccdc33 protein_coding retained_intron MGP_CBAJ_T0092093.1 MGP_CBAJ_G0034537.1 mouse_genomes_project 9 61034839 61041847 - MGP_CBAJ_P0092093 Ccdc33 protein_coding protein_coding MGP_CBAJ_T0094607.1 MGP_CBAJ_G0035050.1 mouse_genomes_project 9 126263484 126427824 + MGP_CBAJ_P0094607 Gadl1 protein_coding protein_coding MGP_CBAJ_T0094678.1 MGP_CBAJ_G0035068.1 mouse_genomes_project 9 130143096 130147199 - MGP_CBAJ_P0094678 Myd88 protein_coding protein_coding MGP_CBAJ_T0094679.1 MGP_CBAJ_G0035068.1 mouse_genomes_project 9 130143108 130147160 - Myd88 protein_coding retained_intron MGP_CBAJ_T0094681.1 MGP_CBAJ_G0035068.1 mouse_genomes_project 9 130146847 130148569 - MGP_CBAJ_P0094681 Myd88 protein_coding protein_coding MGP_CBAJ_T0092270.1 MGP_CBAJ_G0034582.1 mouse_genomes_project 9 66699532 66928310 - MGP_CBAJ_P0092270 Map2k5 protein_coding protein_coding MGP_CBAJ_T0093719.1 MGP_CBAJ_G0034899.1 mouse_genomes_project 9 116084783 116119742 - MGP_CBAJ_P0093719 Mapkapk3 protein_coding protein_coding MGP_CBAJ_T0093720.1 MGP_CBAJ_G0034899.1 mouse_genomes_project 9 116084791 116119612 - Mapkapk3 protein_coding retained_intron MGP_CBAJ_T0093721.1 MGP_CBAJ_G0034899.1 mouse_genomes_project 9 116085900 116087149 - Mapkapk3 protein_coding retained_intron MGP_CBAJ_T0093722.1 MGP_CBAJ_G0034899.1 mouse_genomes_project 9 116086039 116119209 - MGP_CBAJ_P0093722 Mapkapk3 protein_coding protein_coding MGP_CBAJ_T0093723.1 MGP_CBAJ_G0034899.1 mouse_genomes_project 9 116088638 116091791 - Mapkapk3 protein_coding processed_transcript MGP_CBAJ_T0093724.1 MGP_CBAJ_G0034899.1 mouse_genomes_project 9 116089409 116119644 - Mapkapk3 protein_coding retained_intron MGP_CBAJ_T0093725.1 MGP_CBAJ_G0034899.1 mouse_genomes_project 9 116093556 116110743 - MGP_CBAJ_P0093725 Mapkapk3 protein_coding protein_coding MGP_CBAJ_T0093726.1 MGP_CBAJ_G0034899.1 mouse_genomes_project 9 116114568 116119644 - Mapkapk3 protein_coding processed_transcript MGP_CBAJ_T0094586.1 MGP_CBAJ_G0035039.1 mouse_genomes_project 9 124604382 124613600 - MGP_CBAJ_P0094586 Ccr4 protein_coding protein_coding MGP_CBAJ_T0009157.1 MGP_CBAJ_G0007348.1 mouse_genomes_project 9 72445667 72446039 + Gm28195 lincRNA lincRNA MGP_CBAJ_T0002315.1 MGP_CBAJ_G0002228.1 mouse_genomes_project 9 32829859 32831213 + TEC TEC MGP_CBAJ_T0091293.1 MGP_CBAJ_G0034224.1 mouse_genomes_project 9 37941862 37950224 - MGP_CBAJ_P0091293 Nrgn protein_coding protein_coding MGP_CBAJ_T0091294.1 MGP_CBAJ_G0034224.1 mouse_genomes_project 9 37942324 37943509 - Nrgn protein_coding processed_transcript MGP_CBAJ_T0002436.1 MGP_CBAJ_G0002348.1 mouse_genomes_project 9 131087232 131087866 + TEC TEC MGP_CBAJ_T0018278.1 MGP_CBAJ_G0015482.1 mouse_genomes_project 9 67702557 67711470 + Scarletltr processed_transcript processed_transcript MGP_CBAJ_T0009129.1 MGP_CBAJ_G0007327.1 mouse_genomes_project 9 45427967 45439131 + Gm26737 lincRNA lincRNA MGP_CBAJ_T0090922.1 MGP_CBAJ_G0034105.1 mouse_genomes_project 9 20053004 20096533 + MGP_CBAJ_P0090922 Ilf3 protein_coding protein_coding MGP_CBAJ_T0090923.1 MGP_CBAJ_G0034105.1 mouse_genomes_project 9 20053004 20100091 + MGP_CBAJ_P0090923 Ilf3 protein_coding protein_coding MGP_CBAJ_T0090924.1 MGP_CBAJ_G0034105.1 mouse_genomes_project 9 20097607 20100100 + MGP_CBAJ_P0090924 Ilf3 protein_coding unknown_likely_coding MGP_CBAJ_T0092366.1 MGP_CBAJ_G0034612.1 mouse_genomes_project 9 69261755 69278799 - MGP_CBAJ_P0092366 Slc51b protein_coding protein_coding MGP_CBAJ_T0090657.1 MGP_CBAJ_G0033994.1 mouse_genomes_project 9 6337939 6604137 - MGP_CBAJ_P0090657 Arhgap42 protein_coding protein_coding MGP_CBAJ_T0090658.1 MGP_CBAJ_G0033994.1 mouse_genomes_project 9 6341207 6603815 - MGP_CBAJ_P0090658 Arhgap42 protein_coding unknown_likely_coding MGP_CBAJ_T0090659.1 MGP_CBAJ_G0033994.1 mouse_genomes_project 9 6356598 6604137 - Arhgap42 protein_coding retained_intron MGP_CBAJ_T0090660.1 MGP_CBAJ_G0033994.1 mouse_genomes_project 9 6502246 6604062 - MGP_CBAJ_P0090660 Arhgap42 protein_coding protein_coding MGP_CBAJ_T0009207.1 MGP_CBAJ_G0007387.1 mouse_genomes_project 9 105850437 105851064 - 2610303G11Rik lincRNA lincRNA MGP_CBAJ_T0018243.1 MGP_CBAJ_G0015473.1 mouse_genomes_project 9 35176343 35190531 + 4930581F22Rik processed_transcript processed_transcript MGP_CBAJ_T0018244.1 MGP_CBAJ_G0015473.1 mouse_genomes_project 9 35176382 35177880 + 4930581F22Rik processed_transcript processed_transcript MGP_CBAJ_T0018245.1 MGP_CBAJ_G0015473.1 mouse_genomes_project 9 35177024 35183248 + 4930581F22Rik processed_transcript processed_transcript MGP_CBAJ_T0018246.1 MGP_CBAJ_G0015473.1 mouse_genomes_project 9 35177591 35185998 + 4930581F22Rik processed_transcript processed_transcript MGP_CBAJ_T0018247.1 MGP_CBAJ_G0015473.1 mouse_genomes_project 9 35177675 35183676 + 4930581F22Rik processed_transcript processed_transcript MGP_CBAJ_T0018248.1 MGP_CBAJ_G0015473.1 mouse_genomes_project 9 35177805 35186505 + 4930581F22Rik processed_transcript processed_transcript MGP_CBAJ_T0094279.1 MGP_CBAJ_G0034980.1 mouse_genomes_project 9 118216620 118233364 - MGP_CBAJ_P0094279 Fbxw13 protein_coding protein_coding MGP_CBAJ_T0094280.1 MGP_CBAJ_G0034980.1 mouse_genomes_project 9 118216641 118233351 - MGP_CBAJ_P0094280 Fbxw13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094281.1 MGP_CBAJ_G0034980.1 mouse_genomes_project 9 118218917 118232907 - MGP_CBAJ_P0094281 Fbxw13 protein_coding protein_coding MGP_CBAJ_T0018320.1 MGP_CBAJ_G0015499.1 mouse_genomes_project 9 117038372 117045118 + 4930447F24Rik processed_transcript antisense MGP_CBAJ_T0018321.1 MGP_CBAJ_G0015499.1 mouse_genomes_project 9 117044068 117045781 + 4930447F24Rik processed_transcript antisense MGP_CBAJ_T0018322.1 MGP_CBAJ_G0015499.1 mouse_genomes_project 9 117044541 117044929 + 4930447F24Rik processed_transcript retained_intron MGP_CBAJ_T0091433.1 MGP_CBAJ_G0034325.1 mouse_genomes_project 9 41677644 41683382 + MGP_CBAJ_P0091433 Hspa8 protein_coding protein_coding MGP_CBAJ_T0091434.1 MGP_CBAJ_G0034325.1 mouse_genomes_project 9 41677949 41678791 + Hspa8 protein_coding retained_intron MGP_CBAJ_T0094866.1 MGP_CBAJ_G0035134.1 mouse_genomes_project 9 135002066 135037080 - MGP_CBAJ_P0094866 Lztfl1 protein_coding protein_coding MGP_CBAJ_T0094867.1 MGP_CBAJ_G0035134.1 mouse_genomes_project 9 135005745 135037061 - MGP_CBAJ_P0094867 Lztfl1 protein_coding protein_coding MGP_CBAJ_T0094868.1 MGP_CBAJ_G0035134.1 mouse_genomes_project 9 135012434 135014443 - Lztfl1 protein_coding retained_intron MGP_CBAJ_T0094869.1 MGP_CBAJ_G0035134.1 mouse_genomes_project 9 135014182 135037008 - Lztfl1 protein_coding processed_transcript MGP_CBAJ_T0094870.1 MGP_CBAJ_G0035134.1 mouse_genomes_project 9 135031895 135037002 - Lztfl1 protein_coding processed_transcript MGP_CBAJ_T0094871.1 MGP_CBAJ_G0035134.1 mouse_genomes_project 9 135031899 135037004 - Lztfl1 protein_coding processed_transcript MGP_CBAJ_T0094872.1 MGP_CBAJ_G0035134.1 mouse_genomes_project 9 135034340 135037037 - Lztfl1 protein_coding retained_intron MGP_CBAJ_T0090614.1 MGP_CBAJ_G0033976.1 mouse_genomes_project 9 4487089 4511099 - MGP_CBAJ_P0090614 Mmp1b protein_coding protein_coding MGP_CBAJ_T0093253.1 MGP_CBAJ_G0034801.1 mouse_genomes_project 9 104644576 104654236 - protein_coding processed_transcript MGP_CBAJ_T0093254.1 MGP_CBAJ_G0034801.1 mouse_genomes_project 9 104644742 104654353 - protein_coding processed_transcript MGP_CBAJ_T0093255.1 MGP_CBAJ_G0034801.1 mouse_genomes_project 9 104653767 104681668 - MGP_CBAJ_P0093255 protein_coding unknown_likely_coding MGP_CBAJ_T0093256.1 MGP_CBAJ_G0034801.1 mouse_genomes_project 9 104653910 104664418 - MGP_CBAJ_P0093256 protein_coding protein_coding MGP_CBAJ_T0093257.1 MGP_CBAJ_G0034801.1 mouse_genomes_project 9 104657010 104681704 - protein_coding retained_intron MGP_CBAJ_T0093258.1 MGP_CBAJ_G0034801.1 mouse_genomes_project 9 104663500 104681750 - protein_coding retained_intron MGP_CBAJ_T0091436.1 MGP_CBAJ_G0034327.1 mouse_genomes_project 9 41778653 41847395 - MGP_CBAJ_P0091436 Jhy protein_coding protein_coding MGP_CBAJ_T0091437.1 MGP_CBAJ_G0034327.1 mouse_genomes_project 9 41778655 41781450 - Jhy protein_coding retained_intron MGP_CBAJ_T0091438.1 MGP_CBAJ_G0034327.1 mouse_genomes_project 9 41842390 41843834 - MGP_CBAJ_P0091438 Jhy protein_coding protein_coding MGP_CBAJ_T0092747.1 MGP_CBAJ_G0034692.1 mouse_genomes_project 9 80316666 80320535 + MGP_CBAJ_P0092747 Bcl2l10 protein_coding protein_coding MGP_CBAJ_T0010947.1 MGP_CBAJ_G0009085.1 mouse_genomes_project 9 68450815 68450922 - miRNA miRNA MGP_CBAJ_T0091536.1 MGP_CBAJ_G0034359.1 mouse_genomes_project 9 45709652 45723117 - MGP_CBAJ_P0091536 Vps11 protein_coding protein_coding MGP_CBAJ_T0092958.1 MGP_CBAJ_G0034744.1 mouse_genomes_project 9 90058488 90268643 + MGP_CBAJ_P0092958 Bckdhb protein_coding protein_coding MGP_CBAJ_T0092959.1 MGP_CBAJ_G0034744.1 mouse_genomes_project 9 90058493 90268643 + MGP_CBAJ_P0092959 Bckdhb protein_coding protein_coding MGP_CBAJ_T0092960.1 MGP_CBAJ_G0034744.1 mouse_genomes_project 9 90082368 90268644 + MGP_CBAJ_P0092960 Bckdhb protein_coding protein_coding MGP_CBAJ_T0092961.1 MGP_CBAJ_G0034744.1 mouse_genomes_project 9 90168795 90268602 + Bckdhb protein_coding processed_transcript MGP_CBAJ_T0092962.1 MGP_CBAJ_G0034744.1 mouse_genomes_project 9 90178466 90268643 + Bckdhb protein_coding processed_transcript MGP_CBAJ_T0092963.1 MGP_CBAJ_G0034744.1 mouse_genomes_project 9 90251316 90268644 + Bckdhb protein_coding processed_transcript MGP_CBAJ_T0093618.1 MGP_CBAJ_G0034880.1 mouse_genomes_project 9 115153695 115159034 - MGP_CBAJ_P0093618 Acy1 protein_coding protein_coding MGP_CBAJ_T0093619.1 MGP_CBAJ_G0034880.1 mouse_genomes_project 9 115153698 115158892 - Acy1 protein_coding retained_intron MGP_CBAJ_T0093620.1 MGP_CBAJ_G0034880.1 mouse_genomes_project 9 115153704 115155429 - Acy1 protein_coding retained_intron MGP_CBAJ_T0093621.1 MGP_CBAJ_G0034880.1 mouse_genomes_project 9 115155434 115157096 - Acy1 protein_coding retained_intron MGP_CBAJ_T0093622.1 MGP_CBAJ_G0034880.1 mouse_genomes_project 9 115155679 115158917 - MGP_CBAJ_P0093622 Acy1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093623.1 MGP_CBAJ_G0034880.1 mouse_genomes_project 9 115155810 115159034 - MGP_CBAJ_P0093623 Acy1 protein_coding protein_coding MGP_CBAJ_T0093624.1 MGP_CBAJ_G0034880.1 mouse_genomes_project 9 115157611 115158902 - MGP_CBAJ_P0093624 Acy1 protein_coding protein_coding MGP_CBAJ_T0091435.1 MGP_CBAJ_G0034326.1 mouse_genomes_project 9 41757492 41761380 + MGP_CBAJ_P0091435 Bsx protein_coding protein_coding MGP_CBAJ_T0009236.1 MGP_CBAJ_G0007412.1 mouse_genomes_project 9 121973722 121975474 + 2900079G21Rik lincRNA lincRNA MGP_CBAJ_T0009237.1 MGP_CBAJ_G0007412.1 mouse_genomes_project 9 121973739 122031319 + 2900079G21Rik lincRNA lincRNA MGP_CBAJ_T0009238.1 MGP_CBAJ_G0007412.1 mouse_genomes_project 9 121973826 121975472 + 2900079G21Rik lincRNA lincRNA MGP_CBAJ_T0009239.1 MGP_CBAJ_G0007412.1 mouse_genomes_project 9 121996112 122112561 + 2900079G21Rik lincRNA lincRNA MGP_CBAJ_T0015929.1 MGP_CBAJ_G0014041.1 mouse_genomes_project 9 131215204 131215794 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0092055.1 MGP_CBAJ_G0034525.1 mouse_genomes_project 9 60424453 60431196 + MGP_CBAJ_P0092055 Ulk3 protein_coding protein_coding MGP_CBAJ_T0091547.1 MGP_CBAJ_G0034362.1 mouse_genomes_project 9 45757854 45764005 - MGP_CBAJ_P0091547 Trappc4 protein_coding protein_coding MGP_CBAJ_T0091351.1 MGP_CBAJ_G0034270.1 mouse_genomes_project 9 39408719 39409851 + MGP_CBAJ_P0091351 Olfr922 protein_coding protein_coding MGP_CBAJ_T0091728.1 MGP_CBAJ_G0034416.1 mouse_genomes_project 9 50326739 50333358 - MGP_CBAJ_P0091728 Rbm7 protein_coding protein_coding MGP_CBAJ_T0091155.1 MGP_CBAJ_G0034185.1 mouse_genomes_project 9 35250765 35267054 - MGP_CBAJ_P0091155 Tirap protein_coding protein_coding MGP_CBAJ_T0091156.1 MGP_CBAJ_G0034185.1 mouse_genomes_project 9 35253062 35266751 - MGP_CBAJ_P0091156 Tirap protein_coding protein_coding MGP_CBAJ_T0091157.1 MGP_CBAJ_G0034185.1 mouse_genomes_project 9 35253062 35266691 - MGP_CBAJ_P0091157 Tirap protein_coding protein_coding MGP_CBAJ_T0091158.1 MGP_CBAJ_G0034185.1 mouse_genomes_project 9 35253624 35266733 - MGP_CBAJ_P0091158 Tirap protein_coding protein_coding MGP_CBAJ_T0091159.1 MGP_CBAJ_G0034185.1 mouse_genomes_project 9 35255017 35266646 - MGP_CBAJ_P0091159 Tirap protein_coding protein_coding MGP_CBAJ_T0091160.1 MGP_CBAJ_G0034185.1 mouse_genomes_project 9 35255314 35257689 - MGP_CBAJ_P0091160 Tirap protein_coding protein_coding MGP_CBAJ_T0091161.1 MGP_CBAJ_G0034185.1 mouse_genomes_project 9 35257325 35266262 - MGP_CBAJ_P0091161 Tirap protein_coding protein_coding MGP_CBAJ_T0005398.1 MGP_CBAJ_G0004559.1 mouse_genomes_project 9 84164781 84165534 - 4921509A06Rik antisense antisense MGP_CBAJ_T0015913.1 MGP_CBAJ_G0014025.1 mouse_genomes_project 9 112736490 112737205 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009144.1 MGP_CBAJ_G0007339.1 mouse_genomes_project 9 60899996 60909350 + Gm17322 lincRNA lincRNA MGP_CBAJ_T0099610.1 MGP_CBAJ_G0037865.1 mouse_genomes_project 9 66666454 66666561 + Gm25064 snRNA snRNA MGP_CBAJ_T0002337.1 MGP_CBAJ_G0002250.1 mouse_genomes_project 9 77286065 77288498 + TEC TEC MGP_CBAJ_T0009145.1 MGP_CBAJ_G0007340.1 mouse_genomes_project 9 61347299 61350979 + 1700072B07Rik lincRNA lincRNA MGP_CBAJ_T0091756.1 MGP_CBAJ_G0034430.1 mouse_genomes_project 9 51503896 51559071 + MGP_CBAJ_P0091756 Gm11149 protein_coding protein_coding MGP_CBAJ_T0015881.1 MGP_CBAJ_G0013993.1 mouse_genomes_project 9 99337014 99337542 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0090877.1 MGP_CBAJ_G0034084.1 mouse_genomes_project 9 19495862 19499665 + MGP_CBAJ_P0090877 Ppan protein_coding protein_coding MGP_CBAJ_T0090878.1 MGP_CBAJ_G0034084.1 mouse_genomes_project 9 19495937 19497823 + Ppan protein_coding retained_intron MGP_CBAJ_T0090879.1 MGP_CBAJ_G0034084.1 mouse_genomes_project 9 19495954 19497164 + Ppan protein_coding retained_intron MGP_CBAJ_T0090880.1 MGP_CBAJ_G0034084.1 mouse_genomes_project 9 19495972 19499665 + Ppan protein_coding retained_intron MGP_CBAJ_T0090881.1 MGP_CBAJ_G0034084.1 mouse_genomes_project 9 19498126 19498843 + Ppan protein_coding retained_intron MGP_CBAJ_T0090882.1 MGP_CBAJ_G0034084.1 mouse_genomes_project 9 19498695 19499171 + Ppan protein_coding retained_intron MGP_CBAJ_T0092418.1 MGP_CBAJ_G0034626.1 mouse_genomes_project 9 70030090 70067188 - MGP_CBAJ_P0092418 Snx1 protein_coding protein_coding MGP_CBAJ_T0092419.1 MGP_CBAJ_G0034626.1 mouse_genomes_project 9 70031081 70033712 - Snx1 protein_coding retained_intron MGP_CBAJ_T0092420.1 MGP_CBAJ_G0034626.1 mouse_genomes_project 9 70036551 70038952 - Snx1 protein_coding retained_intron MGP_CBAJ_T0092421.1 MGP_CBAJ_G0034626.1 mouse_genomes_project 9 70038919 70044059 - Snx1 protein_coding retained_intron MGP_CBAJ_T0092422.1 MGP_CBAJ_G0034626.1 mouse_genomes_project 9 70039766 70068889 - MGP_CBAJ_P0092422 Snx1 protein_coding protein_coding MGP_CBAJ_T0092423.1 MGP_CBAJ_G0034626.1 mouse_genomes_project 9 70046835 70048085 - Snx1 protein_coding retained_intron MGP_CBAJ_T0092424.1 MGP_CBAJ_G0034626.1 mouse_genomes_project 9 70051502 70067099 - Snx1 protein_coding retained_intron MGP_CBAJ_T0092575.1 MGP_CBAJ_G0034663.1 mouse_genomes_project 9 76037294 76044626 - MGP_CBAJ_P0092575 Polr2m protein_coding protein_coding MGP_CBAJ_T0092580.1 MGP_CBAJ_G0034663.1 mouse_genomes_project 9 76040303 76044740 - MGP_CBAJ_P0092580 Polr2m protein_coding nonsense_mediated_decay MGP_CBAJ_T0093036.1 MGP_CBAJ_G0034760.1 mouse_genomes_project 9 94812413 94861724 + MGP_CBAJ_P0093036 Nt5e protein_coding protein_coding MGP_CBAJ_T0093037.1 MGP_CBAJ_G0034760.1 mouse_genomes_project 9 94814548 94818142 + Nt5e protein_coding retained_intron MGP_CBAJ_T0093038.1 MGP_CBAJ_G0034760.1 mouse_genomes_project 9 94814563 94857451 + Nt5e protein_coding retained_intron MGP_CBAJ_T0009234.1 MGP_CBAJ_G0007410.1 mouse_genomes_project 9 121221302 121226077 - Gm42523 lincRNA lincRNA MGP_CBAJ_T0090581.1 MGP_CBAJ_G0033967.1 mouse_genomes_project 9 2179235 2188033 + MGP_CBAJ_P0090581 Casp1 protein_coding protein_coding MGP_CBAJ_T0015852.1 MGP_CBAJ_G0013964.1 mouse_genomes_project 9 85517665 85517945 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0090997.1 MGP_CBAJ_G0034132.1 mouse_genomes_project 9 20961584 20962765 - MGP_CBAJ_P0090997 Elof1 protein_coding protein_coding MGP_CBAJ_T0090998.1 MGP_CBAJ_G0034132.1 mouse_genomes_project 9 20961585 20965744 - MGP_CBAJ_P0090998 Elof1 protein_coding protein_coding MGP_CBAJ_T0092671.1 MGP_CBAJ_G0034675.1 mouse_genomes_project 9 77705466 77719783 + MGP_CBAJ_P0092671 Dyx1c1 protein_coding protein_coding MGP_CBAJ_T0092672.1 MGP_CBAJ_G0034675.1 mouse_genomes_project 9 77705466 77719786 + MGP_CBAJ_P0092672 Dyx1c1 protein_coding protein_coding MGP_CBAJ_T0094701.1 MGP_CBAJ_G0035076.1 mouse_genomes_project 9 130768722 130803909 + MGP_CBAJ_P0094701 Wdr48 protein_coding protein_coding MGP_CBAJ_T0091781.1 MGP_CBAJ_G0034440.1 mouse_genomes_project 9 52721107 52749153 - MGP_CBAJ_P0091781 Dlat protein_coding protein_coding MGP_CBAJ_T0091782.1 MGP_CBAJ_G0034440.1 mouse_genomes_project 9 52723002 52733542 - Dlat protein_coding retained_intron MGP_CBAJ_T0091783.1 MGP_CBAJ_G0034440.1 mouse_genomes_project 9 52723930 52735563 - Dlat protein_coding processed_transcript MGP_CBAJ_T0091784.1 MGP_CBAJ_G0034440.1 mouse_genomes_project 9 52726388 52733243 - Dlat protein_coding retained_intron MGP_CBAJ_T0091785.1 MGP_CBAJ_G0034440.1 mouse_genomes_project 9 52726705 52737009 - Dlat protein_coding processed_transcript MGP_CBAJ_T0091786.1 MGP_CBAJ_G0034440.1 mouse_genomes_project 9 52733213 52739276 - Dlat protein_coding retained_intron MGP_CBAJ_T0094568.1 MGP_CBAJ_G0035030.1 mouse_genomes_project 9 123660433 123716472 + MGP_CBAJ_P0094568 unknown_likely_coding unknown_likely_coding MGP_CBAJ_T0094293.1 MGP_CBAJ_G0034988.1 mouse_genomes_project 9 119239839 119251139 + MGP_CBAJ_P0094293 Nme6 protein_coding protein_coding MGP_CBAJ_T0094294.1 MGP_CBAJ_G0034988.1 mouse_genomes_project 9 119239848 119251584 + MGP_CBAJ_P0094294 Nme6 protein_coding protein_coding MGP_CBAJ_T0094295.1 MGP_CBAJ_G0034988.1 mouse_genomes_project 9 119239861 119240681 + Nme6 protein_coding retained_intron MGP_CBAJ_T0094296.1 MGP_CBAJ_G0034988.1 mouse_genomes_project 9 119239861 119251485 + Nme6 protein_coding processed_transcript MGP_CBAJ_T0094297.1 MGP_CBAJ_G0034988.1 mouse_genomes_project 9 119239871 119250648 + MGP_CBAJ_P0094297 Nme6 protein_coding protein_coding MGP_CBAJ_T0094298.1 MGP_CBAJ_G0034988.1 mouse_genomes_project 9 119239876 119251269 + Nme6 protein_coding processed_transcript MGP_CBAJ_T0094299.1 MGP_CBAJ_G0034988.1 mouse_genomes_project 9 119239877 119251566 + Nme6 protein_coding processed_transcript MGP_CBAJ_T0094300.1 MGP_CBAJ_G0034988.1 mouse_genomes_project 9 119239897 119242720 + Nme6 protein_coding retained_intron MGP_CBAJ_T0094301.1 MGP_CBAJ_G0034988.1 mouse_genomes_project 9 119239976 119251196 + MGP_CBAJ_P0094301 Nme6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094302.1 MGP_CBAJ_G0034988.1 mouse_genomes_project 9 119240120 119251334 + MGP_CBAJ_P0094302 Nme6 protein_coding protein_coding MGP_CBAJ_T0094303.1 MGP_CBAJ_G0034988.1 mouse_genomes_project 9 119240132 119251271 + MGP_CBAJ_P0094303 Nme6 protein_coding protein_coding MGP_CBAJ_T0094304.1 MGP_CBAJ_G0034988.1 mouse_genomes_project 9 119240137 119251190 + Nme6 protein_coding processed_transcript MGP_CBAJ_T0094305.1 MGP_CBAJ_G0034988.1 mouse_genomes_project 9 119240281 119250189 + Nme6 protein_coding retained_intron MGP_CBAJ_T0094306.1 MGP_CBAJ_G0034988.1 mouse_genomes_project 9 119240283 119251157 + Nme6 protein_coding processed_transcript MGP_CBAJ_T0094307.1 MGP_CBAJ_G0034988.1 mouse_genomes_project 9 119240381 119251726 + Nme6 protein_coding processed_transcript MGP_CBAJ_T0093600.1 MGP_CBAJ_G0034876.1 mouse_genomes_project 9 114873645 114877931 + MGP_CBAJ_P0093600 Tlr9 protein_coding protein_coding MGP_CBAJ_T0094709.1 MGP_CBAJ_G0035081.1 mouse_genomes_project 9 130935281 130960697 - MGP_CBAJ_P0094709 Cx3cr1 protein_coding protein_coding MGP_CBAJ_T0094710.1 MGP_CBAJ_G0035081.1 mouse_genomes_project 9 130935931 130960698 - MGP_CBAJ_P0094710 Cx3cr1 protein_coding protein_coding MGP_CBAJ_T0094024.1 MGP_CBAJ_G0034942.1 mouse_genomes_project 9 117244018 117247053 - MGP_CBAJ_P0094024 Tcta protein_coding protein_coding MGP_CBAJ_T0094025.1 MGP_CBAJ_G0034942.1 mouse_genomes_project 9 117244714 117247223 - MGP_CBAJ_P0094025 Tcta protein_coding protein_coding MGP_CBAJ_T0094026.1 MGP_CBAJ_G0034942.1 mouse_genomes_project 9 117244950 117247011 - MGP_CBAJ_P0094026 Tcta protein_coding protein_coding MGP_CBAJ_T0009192.1 MGP_CBAJ_G0007377.1 mouse_genomes_project 9 98262744 98450913 + Gm29478 lincRNA lincRNA MGP_CBAJ_T0015853.1 MGP_CBAJ_G0013965.1 mouse_genomes_project 9 85775411 85775739 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0092513.1 MGP_CBAJ_G0034647.1 mouse_genomes_project 9 73808100 73847458 + MGP_CBAJ_P0092513 Anxa2 protein_coding protein_coding MGP_CBAJ_T0092514.1 MGP_CBAJ_G0034647.1 mouse_genomes_project 9 73808196 73840908 + MGP_CBAJ_P0092514 Anxa2 protein_coding protein_coding MGP_CBAJ_T0092515.1 MGP_CBAJ_G0034647.1 mouse_genomes_project 9 73808546 73839510 + MGP_CBAJ_P0092515 Anxa2 protein_coding protein_coding MGP_CBAJ_T0092516.1 MGP_CBAJ_G0034647.1 mouse_genomes_project 9 73834132 73847458 + Anxa2 protein_coding retained_intron MGP_CBAJ_T0092517.1 MGP_CBAJ_G0034647.1 mouse_genomes_project 9 73835778 73847176 + MGP_CBAJ_P0092517 Anxa2 protein_coding protein_coding MGP_CBAJ_T0092518.1 MGP_CBAJ_G0034647.1 mouse_genomes_project 9 73842433 73843759 + Anxa2 protein_coding retained_intron MGP_CBAJ_T0009245.1 MGP_CBAJ_G0007418.1 mouse_genomes_project 9 130766530 130768691 - Gm2449 lincRNA lincRNA MGP_CBAJ_T0009214.1 MGP_CBAJ_G0007394.1 mouse_genomes_project 9 110544802 110553590 + Gm26846 lincRNA lincRNA MGP_CBAJ_T0091548.1 MGP_CBAJ_G0034363.1 mouse_genomes_project 9 45764170 45766877 + MGP_CBAJ_P0091548 Rps25 protein_coding protein_coding MGP_CBAJ_T0094583.1 MGP_CBAJ_G0035036.1 mouse_genomes_project 9 124477672 124493319 - MGP_CBAJ_P0094583 Crtap protein_coding protein_coding MGP_CBAJ_T0094801.1 MGP_CBAJ_G0035108.1 mouse_genomes_project 9 133052261 133086974 + MGP_CBAJ_P0094801 Fam198a protein_coding protein_coding MGP_CBAJ_T0091725.1 MGP_CBAJ_G0034413.1 mouse_genomes_project 9 50204637 50231472 + MGP_CBAJ_P0091725 Nxpe4 protein_coding unknown_likely_coding MGP_CBAJ_T0015842.1 MGP_CBAJ_G0013954.1 mouse_genomes_project 9 81834119 81834873 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0090909.1 MGP_CBAJ_G0034101.1 mouse_genomes_project 9 19936266 19960312 - MGP_CBAJ_P0090909 Kri1 protein_coding protein_coding MGP_CBAJ_T0090910.1 MGP_CBAJ_G0034101.1 mouse_genomes_project 9 19936445 19960296 - MGP_CBAJ_P0090910 Kri1 protein_coding protein_coding MGP_CBAJ_T0090911.1 MGP_CBAJ_G0034101.1 mouse_genomes_project 9 19936677 19938203 - Kri1 protein_coding retained_intron MGP_CBAJ_T0090912.1 MGP_CBAJ_G0034101.1 mouse_genomes_project 9 19936730 19960296 - MGP_CBAJ_P0090912 Kri1 protein_coding unknown_likely_coding MGP_CBAJ_T0090913.1 MGP_CBAJ_G0034101.1 mouse_genomes_project 9 19944554 19960312 - Kri1 protein_coding retained_intron MGP_CBAJ_T0090914.1 MGP_CBAJ_G0034101.1 mouse_genomes_project 9 19947451 19960299 - Kri1 protein_coding retained_intron MGP_CBAJ_T0090915.1 MGP_CBAJ_G0034101.1 mouse_genomes_project 9 19948411 19960312 - Kri1 protein_coding retained_intron MGP_CBAJ_T0090916.1 MGP_CBAJ_G0034101.1 mouse_genomes_project 9 19959867 19960299 - Kri1 protein_coding retained_intron MGP_CBAJ_T0005340.1 MGP_CBAJ_G0004518.1 mouse_genomes_project 9 23317919 23322028 - Gm15600 antisense antisense MGP_CBAJ_T0093281.1 MGP_CBAJ_G0034810.1 mouse_genomes_project 9 106558031 106558954 + MGP_CBAJ_P0093281 Prr23a1 protein_coding protein_coding MGP_CBAJ_T0093027.1 MGP_CBAJ_G0034757.1 mouse_genomes_project 9 93539288 93567834 + MGP_CBAJ_P0093027 Mrap2 protein_coding protein_coding MGP_CBAJ_T0093028.1 MGP_CBAJ_G0034757.1 mouse_genomes_project 9 93539288 93567834 + MGP_CBAJ_P0093028 Mrap2 protein_coding protein_coding MGP_CBAJ_T0093029.1 MGP_CBAJ_G0034757.1 mouse_genomes_project 9 93539325 93567834 + MGP_CBAJ_P0093029 Mrap2 protein_coding protein_coding MGP_CBAJ_T0090942.1 MGP_CBAJ_G0034109.1 mouse_genomes_project 9 20250062 20282560 + MGP_CBAJ_P0090942 AB124611 protein_coding protein_coding MGP_CBAJ_T0090943.1 MGP_CBAJ_G0034109.1 mouse_genomes_project 9 20250087 20282553 + MGP_CBAJ_P0090943 AB124611 protein_coding protein_coding MGP_CBAJ_T0090944.1 MGP_CBAJ_G0034109.1 mouse_genomes_project 9 20250114 20282558 + MGP_CBAJ_P0090944 AB124611 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090945.1 MGP_CBAJ_G0034109.1 mouse_genomes_project 9 20250151 20282020 + MGP_CBAJ_P0090945 AB124611 protein_coding unknown_likely_coding MGP_CBAJ_T0005359.1 MGP_CBAJ_G0004534.1 mouse_genomes_project 9 53427082 53432771 + 2010007H06Rik antisense antisense MGP_CBAJ_T0005360.1 MGP_CBAJ_G0004534.1 mouse_genomes_project 9 53428864 53429490 + 2010007H06Rik antisense antisense MGP_CBAJ_T0018303.1 MGP_CBAJ_G0015493.1 mouse_genomes_project 9 104285080 104296701 + C430002N11Rik processed_transcript retained_intron MGP_CBAJ_T0018304.1 MGP_CBAJ_G0015493.1 mouse_genomes_project 9 104285093 104297496 + C430002N11Rik processed_transcript retained_intron MGP_CBAJ_T0018305.1 MGP_CBAJ_G0015493.1 mouse_genomes_project 9 104285093 104308467 + C430002N11Rik processed_transcript lincRNA MGP_CBAJ_T0018306.1 MGP_CBAJ_G0015493.1 mouse_genomes_project 9 104285103 104296713 + C430002N11Rik processed_transcript retained_intron MGP_CBAJ_T0018307.1 MGP_CBAJ_G0015493.1 mouse_genomes_project 9 104285119 104296392 + C430002N11Rik processed_transcript lincRNA MGP_CBAJ_T0002378.1 MGP_CBAJ_G0002290.1 mouse_genomes_project 9 99552455 99556524 - TEC TEC MGP_CBAJ_T0090656.1 MGP_CBAJ_G0033993.1 mouse_genomes_project 9 6314308 6318291 + MGP_CBAJ_P0090656 Gm16485 protein_coding protein_coding MGP_CBAJ_T0094648.1 MGP_CBAJ_G0035060.1 mouse_genomes_project 9 129817049 129838297 + Vill protein_coding retained_intron MGP_CBAJ_T0094649.1 MGP_CBAJ_G0035060.1 mouse_genomes_project 9 129817049 129822327 + Vill protein_coding retained_intron MGP_CBAJ_T0094650.1 MGP_CBAJ_G0035060.1 mouse_genomes_project 9 129817049 129838291 + MGP_CBAJ_P0094650 Vill protein_coding protein_coding MGP_CBAJ_T0094651.1 MGP_CBAJ_G0035060.1 mouse_genomes_project 9 129817073 129838098 + MGP_CBAJ_P0094651 Vill protein_coding protein_coding MGP_CBAJ_T0094652.1 MGP_CBAJ_G0035060.1 mouse_genomes_project 9 129817136 129822698 + MGP_CBAJ_P0094652 Vill protein_coding protein_coding MGP_CBAJ_T0094653.1 MGP_CBAJ_G0035060.1 mouse_genomes_project 9 129827719 129838098 + MGP_CBAJ_P0094653 Vill protein_coding protein_coding MGP_CBAJ_T0094654.1 MGP_CBAJ_G0035060.1 mouse_genomes_project 9 129827725 129838109 + MGP_CBAJ_P0094654 Vill protein_coding protein_coding MGP_CBAJ_T0094655.1 MGP_CBAJ_G0035060.1 mouse_genomes_project 9 129827726 129834339 + MGP_CBAJ_P0094655 Vill protein_coding nonsense_mediated_decay MGP_CBAJ_T0094656.1 MGP_CBAJ_G0035060.1 mouse_genomes_project 9 129827729 129831089 + MGP_CBAJ_P0094656 Vill protein_coding protein_coding MGP_CBAJ_T0094657.1 MGP_CBAJ_G0035060.1 mouse_genomes_project 9 129827753 129829615 + Vill protein_coding processed_transcript MGP_CBAJ_T0091984.1 MGP_CBAJ_G0034501.1 mouse_genomes_project 9 58732843 58780862 + MGP_CBAJ_P0091984 Pstpip1 protein_coding protein_coding MGP_CBAJ_T0091985.1 MGP_CBAJ_G0034501.1 mouse_genomes_project 9 58732857 58780850 + Pstpip1 protein_coding retained_intron MGP_CBAJ_T0091986.1 MGP_CBAJ_G0034501.1 mouse_genomes_project 9 58732857 58780846 + Pstpip1 protein_coding retained_intron MGP_CBAJ_T0091987.1 MGP_CBAJ_G0034501.1 mouse_genomes_project 9 58769752 58775414 + Pstpip1 protein_coding processed_transcript MGP_CBAJ_T0091988.1 MGP_CBAJ_G0034501.1 mouse_genomes_project 9 58771555 58773223 + Pstpip1 protein_coding retained_intron MGP_CBAJ_T0091989.1 MGP_CBAJ_G0034501.1 mouse_genomes_project 9 58772520 58775473 + Pstpip1 protein_coding retained_intron MGP_CBAJ_T0091990.1 MGP_CBAJ_G0034501.1 mouse_genomes_project 9 58772520 58773513 + Pstpip1 protein_coding retained_intron MGP_CBAJ_T0092844.1 MGP_CBAJ_G0034722.1 mouse_genomes_project 9 83884882 83912557 + MGP_CBAJ_P0092844 Ddx43 protein_coding protein_coding MGP_CBAJ_T0093752.1 MGP_CBAJ_G0034904.1 mouse_genomes_project 9 116374002 116378731 + MGP_CBAJ_P0093752 Tmem115 protein_coding protein_coding MGP_CBAJ_T0100907.1 MGP_CBAJ_G0039162.1 mouse_genomes_project 9 112894976 112895118 - Gm25904 snoRNA snoRNA MGP_CBAJ_T0002371.1 MGP_CBAJ_G0002283.1 mouse_genomes_project 9 97942197 97945058 - TEC TEC MGP_CBAJ_T0093587.1 MGP_CBAJ_G0034873.1 mouse_genomes_project 9 114817964 114837861 + MGP_CBAJ_P0093587 Wdr82 protein_coding protein_coding MGP_CBAJ_T0093588.1 MGP_CBAJ_G0034873.1 mouse_genomes_project 9 114817965 114821002 + Wdr82 protein_coding retained_intron MGP_CBAJ_T0093589.1 MGP_CBAJ_G0034873.1 mouse_genomes_project 9 114823663 114833249 + MGP_CBAJ_P0093589 Wdr82 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091545.1 MGP_CBAJ_G0034361.1 mouse_genomes_project 9 45751488 45757071 + MGP_CBAJ_P0091545 Slc37a4 protein_coding unknown_likely_coding MGP_CBAJ_T0091546.1 MGP_CBAJ_G0034361.1 mouse_genomes_project 9 45752275 45757064 + MGP_CBAJ_P0091546 Slc37a4 protein_coding protein_coding MGP_CBAJ_T0099588.1 MGP_CBAJ_G0037843.1 mouse_genomes_project 9 13174486 13174641 - Gm22658 snRNA snRNA MGP_CBAJ_T0094766.1 MGP_CBAJ_G0035097.1 mouse_genomes_project 9 132728854 132761109 - MGP_CBAJ_P0094766 Sec22c protein_coding protein_coding MGP_CBAJ_T0094767.1 MGP_CBAJ_G0035097.1 mouse_genomes_project 9 132734408 132761545 - MGP_CBAJ_P0094767 Sec22c protein_coding protein_coding MGP_CBAJ_T0094768.1 MGP_CBAJ_G0035097.1 mouse_genomes_project 9 132735937 132761059 - MGP_CBAJ_P0094768 Sec22c protein_coding nonsense_mediated_decay MGP_CBAJ_T0094769.1 MGP_CBAJ_G0035097.1 mouse_genomes_project 9 132739587 132741857 - Sec22c protein_coding retained_intron MGP_CBAJ_T0094770.1 MGP_CBAJ_G0035097.1 mouse_genomes_project 9 132746989 132761570 - MGP_CBAJ_P0094770 Sec22c protein_coding protein_coding MGP_CBAJ_T0009220.1 MGP_CBAJ_G0007399.1 mouse_genomes_project 9 112760521 112785091 + Gm28548 lincRNA lincRNA MGP_CBAJ_T0010939.1 MGP_CBAJ_G0009077.1 mouse_genomes_project 9 54311489 54311580 - Gm27686 miRNA miRNA MGP_CBAJ_T0091370.1 MGP_CBAJ_G0034289.1 mouse_genomes_project 9 40099764 40100590 - MGP_CBAJ_P0091370 protein_coding protein_coding MGP_CBAJ_T0100880.1 MGP_CBAJ_G0039135.1 mouse_genomes_project 9 67817643 67817713 + Gm22571 snoRNA snoRNA MGP_CBAJ_T0094455.1 MGP_CBAJ_G0035012.1 mouse_genomes_project 9 120439461 120448422 + MGP_CBAJ_P0094455 Prss50 protein_coding protein_coding MGP_CBAJ_T0094456.1 MGP_CBAJ_G0035012.1 mouse_genomes_project 9 120445155 120448421 + MGP_CBAJ_P0094456 Prss50 protein_coding protein_coding MGP_CBAJ_T0002346.1 MGP_CBAJ_G0002259.1 mouse_genomes_project 9 77874979 77877212 + TEC TEC MGP_CBAJ_T0005467.1 MGP_CBAJ_G0004607.1 mouse_genomes_project 9 120211085 120219462 - Gm42762 antisense antisense MGP_CBAJ_T0092848.1 MGP_CBAJ_G0034725.1 mouse_genomes_project 9 83946178 83976629 + MGP_CBAJ_P0092848 Mto1 protein_coding protein_coding MGP_CBAJ_T0092849.1 MGP_CBAJ_G0034725.1 mouse_genomes_project 9 83946178 83976629 + MGP_CBAJ_P0092849 Mto1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092850.1 MGP_CBAJ_G0034725.1 mouse_genomes_project 9 83946183 83948443 + Mto1 protein_coding retained_intron MGP_CBAJ_T0092851.1 MGP_CBAJ_G0034725.1 mouse_genomes_project 9 83964420 83971243 + Mto1 protein_coding retained_intron MGP_CBAJ_T0092852.1 MGP_CBAJ_G0034725.1 mouse_genomes_project 9 83964713 83980251 + MGP_CBAJ_P0092852 Mto1 protein_coding protein_coding MGP_CBAJ_T0092853.1 MGP_CBAJ_G0034725.1 mouse_genomes_project 9 83970894 83976310 + Mto1 protein_coding retained_intron MGP_CBAJ_T0015790.1 MGP_CBAJ_G0013902.1 mouse_genomes_project 9 10632685 10633670 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0092316.1 MGP_CBAJ_G0034594.1 mouse_genomes_project 9 67939158 67966041 + MGP_CBAJ_P0092316 Tipin protein_coding unknown_likely_coding MGP_CBAJ_T0015810.1 MGP_CBAJ_G0013922.1 mouse_genomes_project 9 46741512 46741748 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005345.1 MGP_CBAJ_G0004523.1 mouse_genomes_project 9 34960207 34974693 - Kirrel3os antisense antisense MGP_CBAJ_T0094732.1 MGP_CBAJ_G0035090.1 mouse_genomes_project 9 131501469 131502203 + MGP_CBAJ_P0094732 5830454E08Rik protein_coding protein_coding MGP_CBAJ_T0009216.1 MGP_CBAJ_G0007396.1 mouse_genomes_project 9 110913275 110914225 + 4930533D04Rik lincRNA lincRNA MGP_CBAJ_T0015885.1 MGP_CBAJ_G0013997.1 mouse_genomes_project 9 101634455 101635029 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009194.1 MGP_CBAJ_G0007379.1 mouse_genomes_project 9 99748682 99774683 + lincRNA lincRNA MGP_CBAJ_T0009195.1 MGP_CBAJ_G0007379.1 mouse_genomes_project 9 99749942 99828773 + lincRNA lincRNA MGP_CBAJ_T0094048.1 MGP_CBAJ_G0034949.1 mouse_genomes_project 9 117409012 117422879 - MGP_CBAJ_P0094048 Klhdc8b protein_coding protein_coding MGP_CBAJ_T0094049.1 MGP_CBAJ_G0034949.1 mouse_genomes_project 9 117409034 117414094 - Klhdc8b protein_coding retained_intron MGP_CBAJ_T0094050.1 MGP_CBAJ_G0034949.1 mouse_genomes_project 9 117409034 117412179 - Klhdc8b protein_coding retained_intron MGP_CBAJ_T0094051.1 MGP_CBAJ_G0034949.1 mouse_genomes_project 9 117409034 117413753 - MGP_CBAJ_P0094051 Klhdc8b protein_coding protein_coding MGP_CBAJ_T0094052.1 MGP_CBAJ_G0034949.1 mouse_genomes_project 9 117409207 117413780 - MGP_CBAJ_P0094052 Klhdc8b protein_coding protein_coding MGP_CBAJ_T0094053.1 MGP_CBAJ_G0034949.1 mouse_genomes_project 9 117409348 117422362 - MGP_CBAJ_P0094053 Klhdc8b protein_coding protein_coding MGP_CBAJ_T0094054.1 MGP_CBAJ_G0034949.1 mouse_genomes_project 9 117409643 117411746 - Klhdc8b protein_coding processed_transcript MGP_CBAJ_T0094055.1 MGP_CBAJ_G0034949.1 mouse_genomes_project 9 117412629 117414142 - Klhdc8b protein_coding processed_transcript MGP_CBAJ_T0094056.1 MGP_CBAJ_G0034949.1 mouse_genomes_project 9 117412650 117414177 - Klhdc8b protein_coding retained_intron MGP_CBAJ_T0094057.1 MGP_CBAJ_G0034949.1 mouse_genomes_project 9 117413963 117422215 - Klhdc8b protein_coding processed_transcript MGP_CBAJ_T0094058.1 MGP_CBAJ_G0034949.1 mouse_genomes_project 9 117416051 117422215 - Klhdc8b protein_coding retained_intron MGP_CBAJ_T0094059.1 MGP_CBAJ_G0034949.1 mouse_genomes_project 9 117416053 117418275 - Klhdc8b protein_coding retained_intron MGP_CBAJ_T0094060.1 MGP_CBAJ_G0034949.1 mouse_genomes_project 9 117416244 117422359 - Klhdc8b protein_coding processed_transcript MGP_CBAJ_T0094061.1 MGP_CBAJ_G0034949.1 mouse_genomes_project 9 117419732 117421364 - Klhdc8b protein_coding retained_intron MGP_CBAJ_T0094062.1 MGP_CBAJ_G0034949.1 mouse_genomes_project 9 117420516 117422214 - Klhdc8b protein_coding retained_intron MGP_CBAJ_T0092581.1 MGP_CBAJ_G0034665.1 mouse_genomes_project 9 76064640 76159743 - Myzap protein_coding retained_intron MGP_CBAJ_T0092582.1 MGP_CBAJ_G0034665.1 mouse_genomes_project 9 76064640 76159743 - MGP_CBAJ_P0092582 Myzap protein_coding protein_coding MGP_CBAJ_T0092583.1 MGP_CBAJ_G0034665.1 mouse_genomes_project 9 76065352 76159648 - MGP_CBAJ_P0092583 Myzap protein_coding protein_coding MGP_CBAJ_T0092584.1 MGP_CBAJ_G0034665.1 mouse_genomes_project 9 76128180 76147277 - MGP_CBAJ_P0092584 Myzap protein_coding protein_coding MGP_CBAJ_T0092585.1 MGP_CBAJ_G0034665.1 mouse_genomes_project 9 76131772 76159725 - MGP_CBAJ_P0092585 Myzap protein_coding protein_coding MGP_CBAJ_T0093824.1 MGP_CBAJ_G0034916.1 mouse_genomes_project 9 116454826 116477062 - MGP_CBAJ_P0093824 Gnai2 protein_coding protein_coding MGP_CBAJ_T0093825.1 MGP_CBAJ_G0034916.1 mouse_genomes_project 9 116454826 116477007 - MGP_CBAJ_P0093825 Gnai2 protein_coding protein_coding MGP_CBAJ_T0093826.1 MGP_CBAJ_G0034916.1 mouse_genomes_project 9 116455641 116456749 - Gnai2 protein_coding retained_intron MGP_CBAJ_T0093827.1 MGP_CBAJ_G0034916.1 mouse_genomes_project 9 116456357 116457214 - Gnai2 protein_coding retained_intron MGP_CBAJ_T0093828.1 MGP_CBAJ_G0034916.1 mouse_genomes_project 9 116456926 116458109 - Gnai2 protein_coding retained_intron MGP_CBAJ_T0093829.1 MGP_CBAJ_G0034916.1 mouse_genomes_project 9 116457202 116468308 - MGP_CBAJ_P0093829 Gnai2 protein_coding protein_coding MGP_CBAJ_T0093830.1 MGP_CBAJ_G0034916.1 mouse_genomes_project 9 116461303 116477029 - Gnai2 protein_coding retained_intron MGP_CBAJ_T0093831.1 MGP_CBAJ_G0034916.1 mouse_genomes_project 9 116461735 116462672 - Gnai2 protein_coding retained_intron MGP_CBAJ_T0093832.1 MGP_CBAJ_G0034916.1 mouse_genomes_project 9 116461857 116477032 - MGP_CBAJ_P0093832 Gnai2 protein_coding protein_coding MGP_CBAJ_T0093833.1 MGP_CBAJ_G0034916.1 mouse_genomes_project 9 116476794 116477038 - MGP_CBAJ_P0093833 Gnai2 protein_coding protein_coding MGP_CBAJ_T0093803.1 MGP_CBAJ_G0034914.1 mouse_genomes_project 9 116428475 116433749 + MGP_CBAJ_P0093803 Ifrd2 protein_coding protein_coding MGP_CBAJ_T0093804.1 MGP_CBAJ_G0034914.1 mouse_genomes_project 9 116428559 116433749 + Ifrd2 protein_coding retained_intron MGP_CBAJ_T0093805.1 MGP_CBAJ_G0034914.1 mouse_genomes_project 9 116428590 116432528 + MGP_CBAJ_P0093805 Ifrd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093806.1 MGP_CBAJ_G0034914.1 mouse_genomes_project 9 116431269 116432141 + Ifrd2 protein_coding retained_intron MGP_CBAJ_T0093807.1 MGP_CBAJ_G0034914.1 mouse_genomes_project 9 116431940 116433419 + MGP_CBAJ_P0093807 Ifrd2 protein_coding protein_coding MGP_CBAJ_T0093808.1 MGP_CBAJ_G0034914.1 mouse_genomes_project 9 116432795 116433465 + MGP_CBAJ_P0093808 Ifrd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093809.1 MGP_CBAJ_G0034914.1 mouse_genomes_project 9 116433337 116434096 + Ifrd2 protein_coding processed_transcript MGP_CBAJ_T0093633.1 MGP_CBAJ_G0034882.1 mouse_genomes_project 9 115168488 115172310 + MGP_CBAJ_P0093633 Abhd14b protein_coding protein_coding MGP_CBAJ_T0093634.1 MGP_CBAJ_G0034882.1 mouse_genomes_project 9 115168492 115172335 + MGP_CBAJ_P0093634 Abhd14b protein_coding protein_coding MGP_CBAJ_T0093635.1 MGP_CBAJ_G0034882.1 mouse_genomes_project 9 115168904 115172815 + MGP_CBAJ_P0093635 Abhd14b protein_coding protein_coding MGP_CBAJ_T0093636.1 MGP_CBAJ_G0034882.1 mouse_genomes_project 9 115169340 115173625 + MGP_CBAJ_P0093636 Abhd14b protein_coding protein_coding MGP_CBAJ_T0093637.1 MGP_CBAJ_G0034882.1 mouse_genomes_project 9 115169375 115172783 + MGP_CBAJ_P0093637 Abhd14b protein_coding protein_coding MGP_CBAJ_T0093638.1 MGP_CBAJ_G0034882.1 mouse_genomes_project 9 115169414 115172755 + MGP_CBAJ_P0093638 Abhd14b protein_coding protein_coding MGP_CBAJ_T0010909.1 MGP_CBAJ_G0009047.1 mouse_genomes_project 9 4942163 4942214 + Mir5618 miRNA miRNA MGP_CBAJ_T0091846.1 MGP_CBAJ_G0034452.1 mouse_genomes_project 9 53252120 53255817 + MGP_CBAJ_P0091846 Btg4 protein_coding protein_coding MGP_CBAJ_T0090693.1 MGP_CBAJ_G0034002.1 mouse_genomes_project 9 11606076 11624909 + MGP_CBAJ_P0090693 Fam76b protein_coding nonsense_mediated_decay MGP_CBAJ_T0090694.1 MGP_CBAJ_G0034002.1 mouse_genomes_project 9 11606076 11624909 + MGP_CBAJ_P0090694 Fam76b protein_coding protein_coding MGP_CBAJ_T0090695.1 MGP_CBAJ_G0034002.1 mouse_genomes_project 9 11606095 11609618 + Fam76b protein_coding retained_intron MGP_CBAJ_T0090696.1 MGP_CBAJ_G0034002.1 mouse_genomes_project 9 11615063 11618427 + Fam76b protein_coding retained_intron MGP_CBAJ_T0091503.1 MGP_CBAJ_G0034348.1 mouse_genomes_project 9 45459547 45464050 + MGP_CBAJ_P0091503 Mcam protein_coding nonsense_mediated_decay MGP_CBAJ_T0091504.1 MGP_CBAJ_G0034348.1 mouse_genomes_project 9 45459736 45477820 + MGP_CBAJ_P0091504 Mcam protein_coding protein_coding MGP_CBAJ_T0091505.1 MGP_CBAJ_G0034348.1 mouse_genomes_project 9 45461622 45462392 + MGP_CBAJ_P0091505 Mcam protein_coding protein_coding MGP_CBAJ_T0091506.1 MGP_CBAJ_G0034348.1 mouse_genomes_project 9 45461939 45464798 + Mcam protein_coding retained_intron MGP_CBAJ_T0005357.1 MGP_CBAJ_G0004533.1 mouse_genomes_project 9 52562997 52584050 - Plet1os antisense antisense MGP_CBAJ_T0005358.1 MGP_CBAJ_G0004533.1 mouse_genomes_project 9 52563001 52581032 - Plet1os antisense antisense MGP_CBAJ_T0092430.1 MGP_CBAJ_G0034629.1 mouse_genomes_project 9 70334724 70364391 + Herc1 protein_coding retained_intron MGP_CBAJ_T0092431.1 MGP_CBAJ_G0034629.1 mouse_genomes_project 9 70334800 70505458 + MGP_CBAJ_P0092431 Herc1 protein_coding protein_coding MGP_CBAJ_T0092432.1 MGP_CBAJ_G0034629.1 mouse_genomes_project 9 70334834 70495215 + MGP_CBAJ_P0092432 Herc1 protein_coding unknown_likely_coding MGP_CBAJ_T0092433.1 MGP_CBAJ_G0034629.1 mouse_genomes_project 9 70439394 70449506 + Herc1 protein_coding retained_intron MGP_CBAJ_T0092434.1 MGP_CBAJ_G0034629.1 mouse_genomes_project 9 70448332 70461335 + MGP_CBAJ_P0092434 Herc1 protein_coding protein_coding MGP_CBAJ_T0092435.1 MGP_CBAJ_G0034629.1 mouse_genomes_project 9 70465198 70473299 + Herc1 protein_coding retained_intron MGP_CBAJ_T0092436.1 MGP_CBAJ_G0034629.1 mouse_genomes_project 9 70493009 70497070 + Herc1 protein_coding retained_intron MGP_CBAJ_T0092437.1 MGP_CBAJ_G0034629.1 mouse_genomes_project 9 70496803 70504276 + Herc1 protein_coding retained_intron MGP_CBAJ_T0090775.1 MGP_CBAJ_G0034030.1 mouse_genomes_project 9 16684740 16699218 + MGP_CBAJ_P0090775 Ubtfl1 protein_coding protein_coding MGP_CBAJ_T0090776.1 MGP_CBAJ_G0034030.1 mouse_genomes_project 9 16684742 16698115 + MGP_CBAJ_P0090776 Ubtfl1 protein_coding protein_coding MGP_CBAJ_T0090777.1 MGP_CBAJ_G0034030.1 mouse_genomes_project 9 16692876 16694525 + MGP_CBAJ_P0090777 Ubtfl1 protein_coding protein_coding MGP_CBAJ_T0092065.1 MGP_CBAJ_G0034532.1 mouse_genomes_project 9 60609383 60627069 - MGP_CBAJ_P0092065 Clk3 protein_coding protein_coding MGP_CBAJ_T0090736.1 MGP_CBAJ_G0034019.1 mouse_genomes_project 9 13253399 13275613 - MGP_CBAJ_P0090736 4931406C07Rik protein_coding protein_coding MGP_CBAJ_T0090737.1 MGP_CBAJ_G0034019.1 mouse_genomes_project 9 13253399 13280415 - MGP_CBAJ_P0090737 4931406C07Rik protein_coding protein_coding MGP_CBAJ_T0090738.1 MGP_CBAJ_G0034019.1 mouse_genomes_project 9 13253399 13280134 - MGP_CBAJ_P0090738 4931406C07Rik protein_coding protein_coding MGP_CBAJ_T0091627.1 MGP_CBAJ_G0034388.1 mouse_genomes_project 9 46646507 46681896 - MGP_CBAJ_P0091627 Tmprss4 protein_coding protein_coding MGP_CBAJ_T0091628.1 MGP_CBAJ_G0034388.1 mouse_genomes_project 9 46646508 46681894 - MGP_CBAJ_P0091628 Tmprss4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091629.1 MGP_CBAJ_G0034388.1 mouse_genomes_project 9 46647086 46681864 - Tmprss4 protein_coding processed_transcript MGP_CBAJ_T0091630.1 MGP_CBAJ_G0034388.1 mouse_genomes_project 9 46647086 46681780 - MGP_CBAJ_P0091630 Tmprss4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091631.1 MGP_CBAJ_G0034388.1 mouse_genomes_project 9 46648578 46654437 - Tmprss4 protein_coding retained_intron MGP_CBAJ_T0092548.1 MGP_CBAJ_G0034653.1 mouse_genomes_project 9 74657644 74866274 + MGP_CBAJ_P0092548 Myo1e protein_coding protein_coding MGP_CBAJ_T0100892.1 MGP_CBAJ_G0039147.1 mouse_genomes_project 9 83353033 83353160 - Gm23609 snoRNA snoRNA MGP_CBAJ_T0009202.1 MGP_CBAJ_G0007383.1 mouse_genomes_project 9 103915560 103917915 - BC043934 lincRNA lincRNA MGP_CBAJ_T0009203.1 MGP_CBAJ_G0007383.1 mouse_genomes_project 9 103915561 103917211 - BC043934 lincRNA lincRNA MGP_CBAJ_T0005471.1 MGP_CBAJ_G0004611.1 mouse_genomes_project 9 125446069 125451724 - Gm4665 antisense antisense MGP_CBAJ_T0092355.1 MGP_CBAJ_G0034606.1 mouse_genomes_project 9 69082699 69098118 + MGP_CBAJ_P0092355 protein_coding protein_coding MGP_CBAJ_T0092356.1 MGP_CBAJ_G0034606.1 mouse_genomes_project 9 69083342 69098048 + MGP_CBAJ_P0092356 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093668.1 MGP_CBAJ_G0034887.1 mouse_genomes_project 9 115228827 115231105 + MGP_CBAJ_P0093668 Iqcf1 protein_coding protein_coding MGP_CBAJ_T0093669.1 MGP_CBAJ_G0034887.1 mouse_genomes_project 9 115228852 115231110 + MGP_CBAJ_P0093669 Iqcf1 protein_coding protein_coding MGP_CBAJ_T0005348.1 MGP_CBAJ_G0004526.1 mouse_genomes_project 9 41576746 41577773 - Gm16095 antisense antisense MGP_CBAJ_T0002427.1 MGP_CBAJ_G0002339.1 mouse_genomes_project 9 119454345 119455287 + TEC TEC MGP_CBAJ_T0090574.1 MGP_CBAJ_G0033962.1 mouse_genomes_project 9 230199 630100 + MGP_CBAJ_P0090574 Gucy1a2 protein_coding protein_coding MGP_CBAJ_T0099602.1 MGP_CBAJ_G0037857.1 mouse_genomes_project 9 47431220 47431319 - Gm24646 snRNA snRNA MGP_CBAJ_T0002404.1 MGP_CBAJ_G0002316.1 mouse_genomes_project 9 110922191 110925013 - TEC TEC MGP_CBAJ_T0015912.1 MGP_CBAJ_G0014024.1 mouse_genomes_project 9 112546736 112547360 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0018239.1 MGP_CBAJ_G0015471.1 mouse_genomes_project 9 13310017 13314790 + Gm16568 processed_transcript processed_transcript MGP_CBAJ_T0097859.1 MGP_CBAJ_G0036132.1 mouse_genomes_project 9 40401801 40402704 - pseudogene pseudogene MGP_CBAJ_T0090791.1 MGP_CBAJ_G0034041.1 mouse_genomes_project 9 17301360 17302299 + MGP_CBAJ_P0090791 Olfr832 protein_coding protein_coding MGP_CBAJ_T0091295.1 MGP_CBAJ_G0034225.1 mouse_genomes_project 9 38005342 38015762 - MGP_CBAJ_P0091295 Spa17 protein_coding protein_coding MGP_CBAJ_T0015858.1 MGP_CBAJ_G0013970.1 mouse_genomes_project 9 89075876 89076042 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0091439.1 MGP_CBAJ_G0034328.1 mouse_genomes_project 9 41855993 41867643 - MGP_CBAJ_P0091439 Crtam protein_coding protein_coding MGP_CBAJ_T0091440.1 MGP_CBAJ_G0034328.1 mouse_genomes_project 9 41856034 41887341 - MGP_CBAJ_P0091440 Crtam protein_coding protein_coding MGP_CBAJ_T0091441.1 MGP_CBAJ_G0034328.1 mouse_genomes_project 9 41856036 41887341 - MGP_CBAJ_P0091441 Crtam protein_coding protein_coding MGP_CBAJ_T0091442.1 MGP_CBAJ_G0034328.1 mouse_genomes_project 9 41856037 41887383 - MGP_CBAJ_P0091442 Crtam protein_coding protein_coding MGP_CBAJ_T0091616.1 MGP_CBAJ_G0034382.1 mouse_genomes_project 9 46505572 46522323 + MGP_CBAJ_P0091616 Mpzl2 protein_coding protein_coding MGP_CBAJ_T0100848.1 MGP_CBAJ_G0039103.1 mouse_genomes_project 9 13288050 13288121 + Gm24299 snoRNA snoRNA MGP_CBAJ_T0090764.1 MGP_CBAJ_G0034026.1 mouse_genomes_project 9 13962434 14461730 - MGP_CBAJ_P0090764 Fat3 protein_coding protein_coding MGP_CBAJ_T0092048.1 MGP_CBAJ_G0034522.1 mouse_genomes_project 9 60372891 60378485 + MGP_CBAJ_P0092048 Fam219b protein_coding protein_coding MGP_CBAJ_T0094270.1 MGP_CBAJ_G0034978.1 mouse_genomes_project 9 118102731 118130934 + MGP_CBAJ_P0094270 Plxnb1 protein_coding protein_coding MGP_CBAJ_T0094271.1 MGP_CBAJ_G0034978.1 mouse_genomes_project 9 118103312 118109690 + MGP_CBAJ_P0094271 Plxnb1 protein_coding protein_coding MGP_CBAJ_T0094272.1 MGP_CBAJ_G0034978.1 mouse_genomes_project 9 118104070 118109690 + MGP_CBAJ_P0094272 Plxnb1 protein_coding protein_coding MGP_CBAJ_T0094273.1 MGP_CBAJ_G0034978.1 mouse_genomes_project 9 118115944 118119871 + MGP_CBAJ_P0094273 Plxnb1 protein_coding protein_coding MGP_CBAJ_T0094274.1 MGP_CBAJ_G0034978.1 mouse_genomes_project 9 118116493 118117799 + Plxnb1 protein_coding retained_intron MGP_CBAJ_T0094275.1 MGP_CBAJ_G0034978.1 mouse_genomes_project 9 118116953 118117923 + Plxnb1 protein_coding retained_intron MGP_CBAJ_T0094276.1 MGP_CBAJ_G0034978.1 mouse_genomes_project 9 118117785 118119900 + Plxnb1 protein_coding retained_intron MGP_CBAJ_T0091519.1 MGP_CBAJ_G0034351.1 mouse_genomes_project 9 45587261 45591414 - MGP_CBAJ_P0091519 Pdzd3 protein_coding protein_coding MGP_CBAJ_T0015840.1 MGP_CBAJ_G0013952.1 mouse_genomes_project 9 80045379 80045922 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0090577.1 MGP_CBAJ_G0033965.1 mouse_genomes_project 9 1159311 1162637 + MGP_CBAJ_P0090577 Msantd4 protein_coding protein_coding MGP_CBAJ_T0090790.1 MGP_CBAJ_G0034040.1 mouse_genomes_project 9 17287115 17301803 - MGP_CBAJ_P0090790 protein_coding protein_coding MGP_CBAJ_T0090809.1 MGP_CBAJ_G0034059.1 mouse_genomes_project 9 18199833 18200796 + MGP_CBAJ_P0090809 protein_coding protein_coding MGP_CBAJ_T0094181.1 MGP_CBAJ_G0034964.1 mouse_genomes_project 9 117842937 117853420 + MGP_CBAJ_P0094181 Nckipsd protein_coding protein_coding MGP_CBAJ_T0094182.1 MGP_CBAJ_G0034964.1 mouse_genomes_project 9 117842942 117845719 + MGP_CBAJ_P0094182 Nckipsd protein_coding protein_coding MGP_CBAJ_T0094183.1 MGP_CBAJ_G0034964.1 mouse_genomes_project 9 117842990 117846177 + MGP_CBAJ_P0094183 Nckipsd protein_coding protein_coding MGP_CBAJ_T0094184.1 MGP_CBAJ_G0034964.1 mouse_genomes_project 9 117846497 117848656 + MGP_CBAJ_P0094184 Nckipsd protein_coding protein_coding MGP_CBAJ_T0094185.1 MGP_CBAJ_G0034964.1 mouse_genomes_project 9 117848000 117848901 + Nckipsd protein_coding retained_intron MGP_CBAJ_T0094186.1 MGP_CBAJ_G0034964.1 mouse_genomes_project 9 117849410 117850684 + Nckipsd protein_coding retained_intron MGP_CBAJ_T0100844.1 MGP_CBAJ_G0039099.1 mouse_genomes_project 9 36299 36429 + Gm24918 snoRNA snoRNA MGP_CBAJ_T0093465.1 MGP_CBAJ_G0034853.1 mouse_genomes_project 9 111792086 112011399 - MGP_CBAJ_P0093465 Tmem108 protein_coding protein_coding MGP_CBAJ_T0093466.1 MGP_CBAJ_G0034853.1 mouse_genomes_project 9 111792917 112084360 - MGP_CBAJ_P0093466 Tmem108 protein_coding protein_coding MGP_CBAJ_T0093467.1 MGP_CBAJ_G0034853.1 mouse_genomes_project 9 111793575 112084317 - MGP_CBAJ_P0093467 Tmem108 protein_coding protein_coding MGP_CBAJ_T0093468.1 MGP_CBAJ_G0034853.1 mouse_genomes_project 9 111793578 111802744 - Tmem108 protein_coding retained_intron MGP_CBAJ_T0093469.1 MGP_CBAJ_G0034853.1 mouse_genomes_project 9 112074947 112084313 - Tmem108 protein_coding retained_intron MGP_CBAJ_T0093584.1 MGP_CBAJ_G0034872.1 mouse_genomes_project 9 114788364 114793245 - MGP_CBAJ_P0093584 protein_coding unknown_likely_coding MGP_CBAJ_T0093585.1 MGP_CBAJ_G0034872.1 mouse_genomes_project 9 114790418 114791245 - MGP_CBAJ_P0093585 protein_coding protein_coding MGP_CBAJ_T0093586.1 MGP_CBAJ_G0034872.1 mouse_genomes_project 9 114790717 114791238 - MGP_CBAJ_P0093586 protein_coding protein_coding MGP_CBAJ_T0009174.1 MGP_CBAJ_G0007363.1 mouse_genomes_project 9 84838852 84839291 + Gm28620 lincRNA lincRNA MGP_CBAJ_T0091968.1 MGP_CBAJ_G0034496.1 mouse_genomes_project 9 58022422 58088882 - MGP_CBAJ_P0091968 Etfa protein_coding protein_coding MGP_CBAJ_T0091969.1 MGP_CBAJ_G0034496.1 mouse_genomes_project 9 58042667 58061908 - Etfa protein_coding processed_transcript MGP_CBAJ_T0091970.1 MGP_CBAJ_G0034496.1 mouse_genomes_project 9 58061131 58088759 - Etfa protein_coding processed_transcript MGP_CBAJ_T0091971.1 MGP_CBAJ_G0034496.1 mouse_genomes_project 9 58063223 58088447 - Etfa protein_coding processed_transcript MGP_CBAJ_T0099604.1 MGP_CBAJ_G0037859.1 mouse_genomes_project 9 49281276 49281383 - Gm22286 snRNA snRNA MGP_CBAJ_T0002373.1 MGP_CBAJ_G0002285.1 mouse_genomes_project 9 98163980 98166805 - TEC TEC MGP_CBAJ_T0005464.1 MGP_CBAJ_G0004604.1 mouse_genomes_project 9 118593856 118618339 + antisense antisense MGP_CBAJ_T0091004.1 MGP_CBAJ_G0034135.1 mouse_genomes_project 9 21045916 21061394 + MGP_CBAJ_P0091004 Zfp872 protein_coding protein_coding MGP_CBAJ_T0091005.1 MGP_CBAJ_G0034135.1 mouse_genomes_project 9 21056337 21059895 + MGP_CBAJ_P0091005 Zfp872 protein_coding protein_coding MGP_CBAJ_T0090883.1 MGP_CBAJ_G0034085.1 mouse_genomes_project 9 19501866 19506148 - MGP_CBAJ_P0090883 Eif3g protein_coding protein_coding MGP_CBAJ_T0091992.1 MGP_CBAJ_G0034503.1 mouse_genomes_project 9 58851060 58896939 - MGP_CBAJ_P0091992 Peak1 protein_coding protein_coding MGP_CBAJ_T0091993.1 MGP_CBAJ_G0034503.1 mouse_genomes_project 9 58855057 59089790 - MGP_CBAJ_P0091993 Peak1 protein_coding protein_coding MGP_CBAJ_T0091994.1 MGP_CBAJ_G0034503.1 mouse_genomes_project 9 58916110 59089765 - MGP_CBAJ_P0091994 Peak1 protein_coding protein_coding MGP_CBAJ_T0091995.1 MGP_CBAJ_G0034503.1 mouse_genomes_project 9 59088421 59089773 - Peak1 protein_coding retained_intron MGP_CBAJ_T0092061.1 MGP_CBAJ_G0034530.1 mouse_genomes_project 9 60552133 60558343 + MGP_CBAJ_P0092061 Cyp1a1 protein_coding protein_coding MGP_CBAJ_T0092528.1 MGP_CBAJ_G0034650.1 mouse_genomes_project 9 74428534 74438866 + MGP_CBAJ_P0092528 Gtf2a2 protein_coding protein_coding MGP_CBAJ_T0092529.1 MGP_CBAJ_G0034650.1 mouse_genomes_project 9 74428538 74438738 + Gtf2a2 protein_coding retained_intron MGP_CBAJ_T0092530.1 MGP_CBAJ_G0034650.1 mouse_genomes_project 9 74428549 74438737 + MGP_CBAJ_P0092530 Gtf2a2 protein_coding protein_coding MGP_CBAJ_T0092531.1 MGP_CBAJ_G0034650.1 mouse_genomes_project 9 74428550 74438738 + MGP_CBAJ_P0092531 Gtf2a2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092532.1 MGP_CBAJ_G0034650.1 mouse_genomes_project 9 74428552 74438515 + Gtf2a2 protein_coding processed_transcript MGP_CBAJ_T0092533.1 MGP_CBAJ_G0034650.1 mouse_genomes_project 9 74428555 74434215 + Gtf2a2 protein_coding retained_intron MGP_CBAJ_T0092534.1 MGP_CBAJ_G0034650.1 mouse_genomes_project 9 74428555 74438737 + MGP_CBAJ_P0092534 Gtf2a2 protein_coding protein_coding MGP_CBAJ_T0092535.1 MGP_CBAJ_G0034650.1 mouse_genomes_project 9 74428558 74435468 + MGP_CBAJ_P0092535 Gtf2a2 protein_coding protein_coding MGP_CBAJ_T0092536.1 MGP_CBAJ_G0034650.1 mouse_genomes_project 9 74428563 74435463 + Gtf2a2 protein_coding retained_intron MGP_CBAJ_T0092537.1 MGP_CBAJ_G0034650.1 mouse_genomes_project 9 74428568 74431623 + Gtf2a2 protein_coding retained_intron MGP_CBAJ_T0092538.1 MGP_CBAJ_G0034650.1 mouse_genomes_project 9 74428579 74435480 + MGP_CBAJ_P0092538 Gtf2a2 protein_coding protein_coding MGP_CBAJ_T0092539.1 MGP_CBAJ_G0034650.1 mouse_genomes_project 9 74428627 74438738 + MGP_CBAJ_P0092539 Gtf2a2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092540.1 MGP_CBAJ_G0034650.1 mouse_genomes_project 9 74431796 74438737 + Gtf2a2 protein_coding processed_transcript MGP_CBAJ_T0092541.1 MGP_CBAJ_G0034650.1 mouse_genomes_project 9 74432803 74435904 + Gtf2a2 protein_coding retained_intron MGP_CBAJ_T0092542.1 MGP_CBAJ_G0034650.1 mouse_genomes_project 9 74435041 74438737 + Gtf2a2 protein_coding retained_intron MGP_CBAJ_T0093939.1 MGP_CBAJ_G0034928.1 mouse_genomes_project 9 116869628 116881641 + Gm20661 protein_coding retained_intron MGP_CBAJ_T0093940.1 MGP_CBAJ_G0034928.1 mouse_genomes_project 9 116869663 116880667 + Gm20661 protein_coding retained_intron MGP_CBAJ_T0093941.1 MGP_CBAJ_G0034928.1 mouse_genomes_project 9 116869857 116881196 + MGP_CBAJ_P0093941 Gm20661 protein_coding nonsense_mediated_decay MGP_CBAJ_T0005460.1 MGP_CBAJ_G0004600.1 mouse_genomes_project 9 116878305 116882290 - 4921523L03Rik antisense antisense MGP_CBAJ_T0094886.1 MGP_CBAJ_G0035141.1 mouse_genomes_project 9 135493183 135504748 + MGP_CBAJ_P0094886 Ccr2 protein_coding protein_coding MGP_CBAJ_T0094887.1 MGP_CBAJ_G0035141.1 mouse_genomes_project 9 135493380 135500327 + MGP_CBAJ_P0094887 Ccr2 protein_coding protein_coding MGP_CBAJ_T0094888.1 MGP_CBAJ_G0035141.1 mouse_genomes_project 9 135493405 135499737 + MGP_CBAJ_P0094888 Ccr2 protein_coding protein_coding MGP_CBAJ_T0094889.1 MGP_CBAJ_G0035141.1 mouse_genomes_project 9 135496820 135500327 + MGP_CBAJ_P0094889 Ccr2 protein_coding protein_coding MGP_CBAJ_T0090816.1 MGP_CBAJ_G0034066.1 mouse_genomes_project 9 18707086 18708083 - MGP_CBAJ_P0090816 Olfr870 protein_coding protein_coding MGP_CBAJ_T0093697.1 MGP_CBAJ_G0034896.1 mouse_genomes_project 9 115641264 115700158 - MGP_CBAJ_P0093697 Manf protein_coding protein_coding MGP_CBAJ_T0093699.1 MGP_CBAJ_G0034896.1 mouse_genomes_project 9 115674094 115698569 - MGP_CBAJ_P0093699 Manf protein_coding protein_coding MGP_CBAJ_T0093703.1 MGP_CBAJ_G0034896.1 mouse_genomes_project 9 115695700 115700265 - MGP_CBAJ_P0093703 Manf protein_coding protein_coding MGP_CBAJ_T0093704.1 MGP_CBAJ_G0034896.1 mouse_genomes_project 9 115697038 115699701 - MGP_CBAJ_P0093704 Manf protein_coding protein_coding MGP_CBAJ_T0093705.1 MGP_CBAJ_G0034896.1 mouse_genomes_project 9 115697369 115700156 - MGP_CBAJ_P0093705 Manf protein_coding protein_coding MGP_CBAJ_T0093706.1 MGP_CBAJ_G0034896.1 mouse_genomes_project 9 115698316 115700201 - Manf protein_coding retained_intron MGP_CBAJ_T0093707.1 MGP_CBAJ_G0034896.1 mouse_genomes_project 9 115698847 115700203 - Manf protein_coding retained_intron MGP_CBAJ_T0093708.1 MGP_CBAJ_G0034898.1 mouse_genomes_project 9 115701110 116060545 - MGP_CBAJ_P0093708 Dock3 protein_coding protein_coding MGP_CBAJ_T0093709.1 MGP_CBAJ_G0034898.1 mouse_genomes_project 9 115701391 115723591 - MGP_CBAJ_P0093709 Dock3 protein_coding protein_coding MGP_CBAJ_T0093710.1 MGP_CBAJ_G0034898.1 mouse_genomes_project 9 115705061 115710027 - MGP_CBAJ_P0093710 Dock3 protein_coding protein_coding MGP_CBAJ_T0093711.1 MGP_CBAJ_G0034898.1 mouse_genomes_project 9 115714894 115716955 - Dock3 protein_coding processed_transcript MGP_CBAJ_T0093712.1 MGP_CBAJ_G0034898.1 mouse_genomes_project 9 115721948 115723893 - Dock3 protein_coding retained_intron MGP_CBAJ_T0093713.1 MGP_CBAJ_G0034898.1 mouse_genomes_project 9 115725086 115760891 - MGP_CBAJ_P0093713 Dock3 protein_coding protein_coding MGP_CBAJ_T0093714.1 MGP_CBAJ_G0034898.1 mouse_genomes_project 9 115752492 115777872 - MGP_CBAJ_P0093714 Dock3 protein_coding protein_coding MGP_CBAJ_T0093715.1 MGP_CBAJ_G0034898.1 mouse_genomes_project 9 115840824 115844478 - Dock3 protein_coding retained_intron MGP_CBAJ_T0093716.1 MGP_CBAJ_G0034898.1 mouse_genomes_project 9 115873955 116060504 - Dock3 protein_coding retained_intron MGP_CBAJ_T0093717.1 MGP_CBAJ_G0034898.1 mouse_genomes_project 9 115904127 116060492 - Dock3 protein_coding retained_intron MGP_CBAJ_T0093718.1 MGP_CBAJ_G0034898.1 mouse_genomes_project 9 115930495 116060218 - Dock3 protein_coding retained_intron MGP_CBAJ_T0015811.1 MGP_CBAJ_G0013923.1 mouse_genomes_project 9 47381357 47385181 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0090754.1 MGP_CBAJ_G0034022.1 mouse_genomes_project 9 13511091 13553570 + MGP_CBAJ_P0090754 Smco4 protein_coding protein_coding MGP_CBAJ_T0090755.1 MGP_CBAJ_G0034022.1 mouse_genomes_project 9 13529152 13553567 + MGP_CBAJ_P0090755 Smco4 protein_coding protein_coding MGP_CBAJ_T0093512.1 MGP_CBAJ_G0034861.1 mouse_genomes_project 9 112979423 113351398 + MGP_CBAJ_P0093512 Cpne4 protein_coding protein_coding MGP_CBAJ_T0093513.1 MGP_CBAJ_G0034861.1 mouse_genomes_project 9 112997633 113351150 + MGP_CBAJ_P0093513 Cpne4 protein_coding protein_coding MGP_CBAJ_T0093514.1 MGP_CBAJ_G0034861.1 mouse_genomes_project 9 113000410 113532278 + MGP_CBAJ_P0093514 Cpne4 protein_coding protein_coding MGP_CBAJ_T0093515.1 MGP_CBAJ_G0034861.1 mouse_genomes_project 9 113000714 113532278 + MGP_CBAJ_P0093515 Cpne4 protein_coding protein_coding MGP_CBAJ_T0015797.1 MGP_CBAJ_G0013909.1 mouse_genomes_project 9 30713344 30715664 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0090674.1 MGP_CBAJ_G0034000.1 mouse_genomes_project 9 11525139 11584845 + MGP_CBAJ_P0090674 Mtmr2 protein_coding protein_coding MGP_CBAJ_T0090675.1 MGP_CBAJ_G0034000.1 mouse_genomes_project 9 11525143 11560074 + Mtmr2 protein_coding processed_transcript MGP_CBAJ_T0090676.1 MGP_CBAJ_G0034000.1 mouse_genomes_project 9 11525155 11584845 + MGP_CBAJ_P0090676 Mtmr2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090677.1 MGP_CBAJ_G0034000.1 mouse_genomes_project 9 11525277 11562588 + MGP_CBAJ_P0090677 Mtmr2 protein_coding protein_coding MGP_CBAJ_T0090678.1 MGP_CBAJ_G0034000.1 mouse_genomes_project 9 11525279 11584013 + MGP_CBAJ_P0090678 Mtmr2 protein_coding protein_coding MGP_CBAJ_T0090679.1 MGP_CBAJ_G0034000.1 mouse_genomes_project 9 11525347 11562588 + MGP_CBAJ_P0090679 Mtmr2 protein_coding protein_coding MGP_CBAJ_T0090680.1 MGP_CBAJ_G0034000.1 mouse_genomes_project 9 11539848 11570519 + MGP_CBAJ_P0090680 Mtmr2 protein_coding protein_coding MGP_CBAJ_T0090681.1 MGP_CBAJ_G0034000.1 mouse_genomes_project 9 11540611 11562586 + Mtmr2 protein_coding processed_transcript MGP_CBAJ_T0100868.1 MGP_CBAJ_G0039123.1 mouse_genomes_project 9 41680235 41680321 + Snord14c snoRNA snoRNA MGP_CBAJ_T0094758.1 MGP_CBAJ_G0035094.1 mouse_genomes_project 9 132513828 132519613 - MGP_CBAJ_P0094758 Cck protein_coding protein_coding MGP_CBAJ_T0091337.1 MGP_CBAJ_G0034262.1 mouse_genomes_project 9 39148782 39150951 + MGP_CBAJ_P0091337 Olfr913 protein_coding protein_coding MGP_CBAJ_T0093433.1 MGP_CBAJ_G0034847.1 mouse_genomes_project 9 111474017 111519287 - MGP_CBAJ_P0093433 Gm20425 protein_coding protein_coding MGP_CBAJ_T0092763.1 MGP_CBAJ_G0034699.1 mouse_genomes_project 9 80808135 80956566 + MGP_CBAJ_P0092763 Bmp5 protein_coding protein_coding MGP_CBAJ_T0092764.1 MGP_CBAJ_G0034699.1 mouse_genomes_project 9 80873558 80890368 + Bmp5 protein_coding processed_transcript MGP_CBAJ_T0015879.1 MGP_CBAJ_G0013991.1 mouse_genomes_project 9 97695772 97696064 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0094460.1 MGP_CBAJ_G0035014.1 mouse_genomes_project 9 120466514 120469367 + Als2cl protein_coding processed_transcript MGP_CBAJ_T0094461.1 MGP_CBAJ_G0035014.1 mouse_genomes_project 9 120466818 120493579 + MGP_CBAJ_P0094461 Als2cl protein_coding protein_coding MGP_CBAJ_T0094462.1 MGP_CBAJ_G0035014.1 mouse_genomes_project 9 120466850 120493585 + MGP_CBAJ_P0094462 Als2cl protein_coding protein_coding MGP_CBAJ_T0094463.1 MGP_CBAJ_G0035014.1 mouse_genomes_project 9 120466877 120471529 + MGP_CBAJ_P0094463 Als2cl protein_coding protein_coding MGP_CBAJ_T0094464.1 MGP_CBAJ_G0035014.1 mouse_genomes_project 9 120466981 120493582 + MGP_CBAJ_P0094464 Als2cl protein_coding protein_coding MGP_CBAJ_T0094465.1 MGP_CBAJ_G0035014.1 mouse_genomes_project 9 120472396 120473987 + Als2cl protein_coding retained_intron MGP_CBAJ_T0094466.1 MGP_CBAJ_G0035014.1 mouse_genomes_project 9 120472924 120480009 + Als2cl protein_coding retained_intron MGP_CBAJ_T0094467.1 MGP_CBAJ_G0035014.1 mouse_genomes_project 9 120477823 120493583 + Als2cl protein_coding processed_transcript MGP_CBAJ_T0091991.1 MGP_CBAJ_G0034502.1 mouse_genomes_project 9 58787855 58812995 - MGP_CBAJ_P0091991 Tspan3 protein_coding protein_coding MGP_CBAJ_T0010944.1 MGP_CBAJ_G0009082.1 mouse_genomes_project 9 65491667 65491744 - Mir5133 miRNA miRNA MGP_CBAJ_T0092702.1 MGP_CBAJ_G0034682.1 mouse_genomes_project 9 77845243 77860446 + MGP_CBAJ_P0092702 Gm20509 protein_coding protein_coding MGP_CBAJ_T0015795.1 MGP_CBAJ_G0013907.1 mouse_genomes_project 9 21591962 21592430 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0005481.1 MGP_CBAJ_G0004617.1 mouse_genomes_project 9 132885923 132896842 + Gm17163 antisense antisense MGP_CBAJ_T0015801.1 MGP_CBAJ_G0013913.1 mouse_genomes_project 9 34184333 34184895 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015888.1 MGP_CBAJ_G0014000.1 mouse_genomes_project 9 102742764 102743513 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0091535.1 MGP_CBAJ_G0034358.1 mouse_genomes_project 9 45697992 45705365 - MGP_CBAJ_P0091535 Hmbs protein_coding protein_coding MGP_CBAJ_T0094674.1 MGP_CBAJ_G0035067.1 mouse_genomes_project 9 130026926 130127354 - MGP_CBAJ_P0094674 Oxsr1 protein_coding protein_coding MGP_CBAJ_T0094675.1 MGP_CBAJ_G0035067.1 mouse_genomes_project 9 130029164 130127249 - MGP_CBAJ_P0094675 Oxsr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094676.1 MGP_CBAJ_G0035067.1 mouse_genomes_project 9 130029639 130031857 - Oxsr1 protein_coding retained_intron MGP_CBAJ_T0094677.1 MGP_CBAJ_G0035067.1 mouse_genomes_project 9 130031262 130053266 - MGP_CBAJ_P0094677 Oxsr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0002335.1 MGP_CBAJ_G0002248.1 mouse_genomes_project 9 77042521 77045274 + TEC TEC MGP_CBAJ_T0092234.1 MGP_CBAJ_G0034572.1 mouse_genomes_project 9 65426840 65440198 - MGP_CBAJ_P0092234 Glce protein_coding protein_coding MGP_CBAJ_T0092235.1 MGP_CBAJ_G0034572.1 mouse_genomes_project 9 65426840 65491760 - MGP_CBAJ_P0092235 Glce protein_coding protein_coding MGP_CBAJ_T0092236.1 MGP_CBAJ_G0034572.1 mouse_genomes_project 9 65429603 65440432 - Glce protein_coding retained_intron MGP_CBAJ_T0092237.1 MGP_CBAJ_G0034572.1 mouse_genomes_project 9 65440059 65491805 - MGP_CBAJ_P0092237 Glce protein_coding protein_coding MGP_CBAJ_T0092238.1 MGP_CBAJ_G0034572.1 mouse_genomes_project 9 65449911 65491759 - Glce protein_coding processed_transcript MGP_CBAJ_T0100877.1 MGP_CBAJ_G0039132.1 mouse_genomes_project 9 63640523 63640646 + Gm22099 snoRNA snoRNA MGP_CBAJ_T0018270.1 MGP_CBAJ_G0015479.1 mouse_genomes_project 9 63130646 63137033 - Gm15507 processed_transcript processed_transcript MGP_CBAJ_T0018271.1 MGP_CBAJ_G0015479.1 mouse_genomes_project 9 63130848 63137033 - Gm15507 processed_transcript processed_transcript MGP_CBAJ_T0018272.1 MGP_CBAJ_G0015479.1 mouse_genomes_project 9 63133733 63137063 - Gm15507 processed_transcript processed_transcript MGP_CBAJ_T0092264.1 MGP_CBAJ_G0034579.1 mouse_genomes_project 9 66358925 66372644 + MGP_CBAJ_P0092264 Calml4 protein_coding protein_coding MGP_CBAJ_T0092265.1 MGP_CBAJ_G0034579.1 mouse_genomes_project 9 66358925 66372644 + MGP_CBAJ_P0092265 Calml4 protein_coding protein_coding MGP_CBAJ_T0011613.1 MGP_CBAJ_G0009751.1 mouse_genomes_project 9 83525094 83525425 - Rn7sk misc_RNA misc_RNA MGP_CBAJ_T0091899.1 MGP_CBAJ_G0034476.1 mouse_genomes_project 9 56695801 56758165 + MGP_CBAJ_P0091899 Gldn protein_coding protein_coding MGP_CBAJ_T0015821.1 MGP_CBAJ_G0013933.1 mouse_genomes_project 9 67000347 67001257 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0090669.1 MGP_CBAJ_G0033998.1 mouse_genomes_project 9 11159941 11161317 + MGP_CBAJ_P0090669 Phxr4 protein_coding protein_coding MGP_CBAJ_T0091214.1 MGP_CBAJ_G0034203.1 mouse_genomes_project 9 36448568 36474040 - MGP_CBAJ_P0091214 9230113P08Rik protein_coding protein_coding MGP_CBAJ_T0091810.1 MGP_CBAJ_G0034446.1 mouse_genomes_project 9 52859337 52863762 + Fdxacb1 protein_coding retained_intron MGP_CBAJ_T0091811.1 MGP_CBAJ_G0034446.1 mouse_genomes_project 9 52859350 52862684 + MGP_CBAJ_P0091811 Fdxacb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091812.1 MGP_CBAJ_G0034446.1 mouse_genomes_project 9 52859383 52863700 + MGP_CBAJ_P0091812 Fdxacb1 protein_coding protein_coding MGP_CBAJ_T0091814.1 MGP_CBAJ_G0034446.1 mouse_genomes_project 9 52861157 52862630 + MGP_CBAJ_P0091814 Fdxacb1 protein_coding protein_coding MGP_CBAJ_T0002388.1 MGP_CBAJ_G0002300.1 mouse_genomes_project 9 107114489 107115180 + TEC TEC MGP_CBAJ_T0091332.1 MGP_CBAJ_G0034257.1 mouse_genomes_project 9 39059213 39060149 + MGP_CBAJ_P0091332 Olfr906 protein_coding protein_coding MGP_CBAJ_T0091851.1 MGP_CBAJ_G0034456.1 mouse_genomes_project 9 53968331 53995076 + Arhgap20 protein_coding retained_intron MGP_CBAJ_T0091852.1 MGP_CBAJ_G0034456.1 mouse_genomes_project 9 53968339 54029284 + Arhgap20 protein_coding retained_intron MGP_CBAJ_T0091853.1 MGP_CBAJ_G0034456.1 mouse_genomes_project 9 53968346 54057487 + MGP_CBAJ_P0091853 Arhgap20 protein_coding protein_coding MGP_CBAJ_T0091854.1 MGP_CBAJ_G0034456.1 mouse_genomes_project 9 53968579 54057496 + MGP_CBAJ_P0091854 Arhgap20 protein_coding protein_coding MGP_CBAJ_T0091855.1 MGP_CBAJ_G0034456.1 mouse_genomes_project 9 54020304 54032978 + Arhgap20 protein_coding processed_transcript MGP_CBAJ_T0091856.1 MGP_CBAJ_G0034456.1 mouse_genomes_project 9 54035351 54052280 + Arhgap20 protein_coding processed_transcript MGP_CBAJ_T0090808.1 MGP_CBAJ_G0034058.1 mouse_genomes_project 9 18172775 18200793 + MGP_CBAJ_P0090808 protein_coding protein_coding MGP_CBAJ_T0090807.1 MGP_CBAJ_G0034057.1 mouse_genomes_project 9 18142633 18143328 + MGP_CBAJ_P0090807 protein_coding protein_coding MGP_CBAJ_T0092066.1 MGP_CBAJ_G0034533.1 mouse_genomes_project 9 60655364 60702506 - MGP_CBAJ_P0092066 Arid3b protein_coding protein_coding MGP_CBAJ_T0092067.1 MGP_CBAJ_G0034533.1 mouse_genomes_project 9 60655367 60702508 - MGP_CBAJ_P0092067 Arid3b protein_coding protein_coding MGP_CBAJ_T0092068.1 MGP_CBAJ_G0034533.1 mouse_genomes_project 9 60655370 60656659 - Arid3b protein_coding processed_transcript MGP_CBAJ_T0092069.1 MGP_CBAJ_G0034533.1 mouse_genomes_project 9 60655523 60699250 - MGP_CBAJ_P0092069 Arid3b protein_coding protein_coding MGP_CBAJ_T0092070.1 MGP_CBAJ_G0034533.1 mouse_genomes_project 9 60657171 60661231 - MGP_CBAJ_P0092070 Arid3b protein_coding protein_coding MGP_CBAJ_T0092071.1 MGP_CBAJ_G0034533.1 mouse_genomes_project 9 60657433 60702278 - MGP_CBAJ_P0092071 Arid3b protein_coding nonsense_mediated_decay MGP_CBAJ_T0092072.1 MGP_CBAJ_G0034533.1 mouse_genomes_project 9 60659695 60702561 - MGP_CBAJ_P0092072 Arid3b protein_coding nonsense_mediated_decay MGP_CBAJ_T0092073.1 MGP_CBAJ_G0034533.1 mouse_genomes_project 9 60659696 60702593 - MGP_CBAJ_P0092073 Arid3b protein_coding protein_coding MGP_CBAJ_T0092074.1 MGP_CBAJ_G0034533.1 mouse_genomes_project 9 60663159 60685639 - MGP_CBAJ_P0092074 Arid3b protein_coding protein_coding MGP_CBAJ_T0092075.1 MGP_CBAJ_G0034533.1 mouse_genomes_project 9 60673138 60702570 - Arid3b protein_coding retained_intron MGP_CBAJ_T0091402.1 MGP_CBAJ_G0034315.1 mouse_genomes_project 9 40865451 40866993 - MGP_CBAJ_P0091402 Olfr983 protein_coding protein_coding MGP_CBAJ_T0091025.1 MGP_CBAJ_G0034144.1 mouse_genomes_project 9 22190476 22468479 + MGP_CBAJ_P0091025 Bmper protein_coding protein_coding MGP_CBAJ_T0091549.1 MGP_CBAJ_G0034364.1 mouse_genomes_project 9 45766630 45777120 - MGP_CBAJ_P0091549 Ccdc84 protein_coding protein_coding MGP_CBAJ_T0090889.1 MGP_CBAJ_G0034091.1 mouse_genomes_project 9 19652320 19662116 + MGP_CBAJ_P0090889 Icam5 protein_coding protein_coding MGP_CBAJ_T0094802.1 MGP_CBAJ_G0035109.1 mouse_genomes_project 9 133090886 133105308 - MGP_CBAJ_P0094802 Pomgnt2 protein_coding protein_coding MGP_CBAJ_T0093094.1 MGP_CBAJ_G0034772.1 mouse_genomes_project 9 96806976 96835541 - Morf4l1 protein_coding retained_intron MGP_CBAJ_T0093095.1 MGP_CBAJ_G0034772.1 mouse_genomes_project 9 96807699 96835631 - MGP_CBAJ_P0093095 Morf4l1 protein_coding protein_coding MGP_CBAJ_T0093096.1 MGP_CBAJ_G0034772.1 mouse_genomes_project 9 96807783 96835190 - Morf4l1 protein_coding processed_transcript MGP_CBAJ_T0093097.1 MGP_CBAJ_G0034772.1 mouse_genomes_project 9 96811314 96812968 - Morf4l1 protein_coding retained_intron MGP_CBAJ_T0093098.1 MGP_CBAJ_G0034772.1 mouse_genomes_project 9 96813760 96814667 - Morf4l1 protein_coding retained_intron MGP_CBAJ_T0093099.1 MGP_CBAJ_G0034772.1 mouse_genomes_project 9 96814185 96835560 - MGP_CBAJ_P0093099 Morf4l1 protein_coding protein_coding MGP_CBAJ_T0093100.1 MGP_CBAJ_G0034772.1 mouse_genomes_project 9 96814663 96835430 - Morf4l1 protein_coding processed_transcript MGP_CBAJ_T0093101.1 MGP_CBAJ_G0034772.1 mouse_genomes_project 9 96814663 96835599 - MGP_CBAJ_P0093101 Morf4l1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093102.1 MGP_CBAJ_G0034772.1 mouse_genomes_project 9 96828543 96835484 - Morf4l1 protein_coding retained_intron MGP_CBAJ_T0015924.1 MGP_CBAJ_G0014036.1 mouse_genomes_project 9 119418354 119419130 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0015882.1 MGP_CBAJ_G0013994.1 mouse_genomes_project 9 99553590 99553738 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0094120.1 MGP_CBAJ_G0034955.1 mouse_genomes_project 9 117539819 117553832 + MGP_CBAJ_P0094120 Impdh2 protein_coding protein_coding MGP_CBAJ_T0094121.1 MGP_CBAJ_G0034955.1 mouse_genomes_project 9 117539954 117553827 + MGP_CBAJ_P0094121 Impdh2 protein_coding unknown_likely_coding MGP_CBAJ_T0094122.1 MGP_CBAJ_G0034955.1 mouse_genomes_project 9 117539972 117547254 + MGP_CBAJ_P0094122 Impdh2 protein_coding protein_coding MGP_CBAJ_T0094123.1 MGP_CBAJ_G0034955.1 mouse_genomes_project 9 117540003 117545621 + Impdh2 protein_coding retained_intron MGP_CBAJ_T0094124.1 MGP_CBAJ_G0034955.1 mouse_genomes_project 9 117540013 117546290 + Impdh2 protein_coding retained_intron MGP_CBAJ_T0094125.1 MGP_CBAJ_G0034955.1 mouse_genomes_project 9 117547186 117548089 + Impdh2 protein_coding retained_intron MGP_CBAJ_T0094126.1 MGP_CBAJ_G0034955.1 mouse_genomes_project 9 117549114 117549476 + Impdh2 protein_coding retained_intron MGP_CBAJ_T0094127.1 MGP_CBAJ_G0034955.1 mouse_genomes_project 9 117549118 117549472 + Impdh2 protein_coding retained_intron MGP_CBAJ_T0005408.1 MGP_CBAJ_G0004565.1 mouse_genomes_project 9 93069828 93075622 + A330041J22Rik antisense antisense MGP_CBAJ_T0092997.1 MGP_CBAJ_G0034750.1 mouse_genomes_project 9 92929728 92947903 - MGP_CBAJ_P0092997 Pgm3 protein_coding protein_coding MGP_CBAJ_T0092998.1 MGP_CBAJ_G0034750.1 mouse_genomes_project 9 92930352 92947904 - MGP_CBAJ_P0092998 Pgm3 protein_coding protein_coding MGP_CBAJ_T0092999.1 MGP_CBAJ_G0034750.1 mouse_genomes_project 9 92930607 92933292 - Pgm3 protein_coding retained_intron MGP_CBAJ_T0093000.1 MGP_CBAJ_G0034750.1 mouse_genomes_project 9 92931032 92947869 - Pgm3 protein_coding retained_intron MGP_CBAJ_T0093001.1 MGP_CBAJ_G0034750.1 mouse_genomes_project 9 92931874 92947918 - Pgm3 protein_coding retained_intron MGP_CBAJ_T0094803.1 MGP_CBAJ_G0035110.1 mouse_genomes_project 9 133241203 133264068 + MGP_CBAJ_P0094803 Snrk protein_coding protein_coding MGP_CBAJ_T0094804.1 MGP_CBAJ_G0035110.1 mouse_genomes_project 9 133241215 133296589 + MGP_CBAJ_P0094804 Snrk protein_coding protein_coding MGP_CBAJ_T0094805.1 MGP_CBAJ_G0035110.1 mouse_genomes_project 9 133241230 133264176 + MGP_CBAJ_P0094805 Snrk protein_coding protein_coding MGP_CBAJ_T0094806.1 MGP_CBAJ_G0035110.1 mouse_genomes_project 9 133241267 133291782 + MGP_CBAJ_P0094806 Snrk protein_coding protein_coding MGP_CBAJ_T0094807.1 MGP_CBAJ_G0035110.1 mouse_genomes_project 9 133241279 133264023 + MGP_CBAJ_P0094807 Snrk protein_coding protein_coding MGP_CBAJ_T0094808.1 MGP_CBAJ_G0035110.1 mouse_genomes_project 9 133241672 133263868 + Snrk protein_coding processed_transcript MGP_CBAJ_T0094809.1 MGP_CBAJ_G0035110.1 mouse_genomes_project 9 133286986 133291784 + Snrk protein_coding retained_intron MGP_CBAJ_T0094810.1 MGP_CBAJ_G0035110.1 mouse_genomes_project 9 133289261 133291883 + Snrk protein_coding retained_intron MGP_CBAJ_T0094811.1 MGP_CBAJ_G0035110.1 mouse_genomes_project 9 133292136 133294396 + Snrk protein_coding processed_transcript MGP_CBAJ_T0100850.1 MGP_CBAJ_G0039105.1 mouse_genomes_project 9 13289165 13289298 + Gm22620 snoRNA snoRNA MGP_CBAJ_T0094638.1 MGP_CBAJ_G0035058.1 mouse_genomes_project 9 129296020 129636495 + MGP_CBAJ_P0094638 Itga9 protein_coding protein_coding MGP_CBAJ_T0094639.1 MGP_CBAJ_G0035058.1 mouse_genomes_project 9 129394664 129530742 + Itga9 protein_coding processed_transcript MGP_CBAJ_T0094640.1 MGP_CBAJ_G0035058.1 mouse_genomes_project 9 129423026 129633215 + MGP_CBAJ_P0094640 Itga9 protein_coding protein_coding MGP_CBAJ_T0094641.1 MGP_CBAJ_G0035058.1 mouse_genomes_project 9 129530794 129571885 + MGP_CBAJ_P0094641 Itga9 protein_coding protein_coding MGP_CBAJ_T0094642.1 MGP_CBAJ_G0035058.1 mouse_genomes_project 9 129567664 129605054 + Itga9 protein_coding processed_transcript MGP_CBAJ_T0094643.1 MGP_CBAJ_G0035058.1 mouse_genomes_project 9 129605182 129632804 + Itga9 protein_coding processed_transcript MGP_CBAJ_T0002339.1 MGP_CBAJ_G0002252.1 mouse_genomes_project 9 77395024 77398526 + TEC TEC MGP_CBAJ_T0091037.1 MGP_CBAJ_G0034148.1 mouse_genomes_project 9 23659670 23660309 + MGP_CBAJ_P0091037 Cypt4 protein_coding protein_coding MGP_CBAJ_T0093286.1 MGP_CBAJ_G0034815.1 mouse_genomes_project 9 106738335 106753965 + MGP_CBAJ_P0093286 Faim protein_coding protein_coding MGP_CBAJ_T0093287.1 MGP_CBAJ_G0034815.1 mouse_genomes_project 9 106738343 106742606 + Faim protein_coding retained_intron MGP_CBAJ_T0093288.1 MGP_CBAJ_G0034815.1 mouse_genomes_project 9 106738349 106745182 + Faim protein_coding retained_intron MGP_CBAJ_T0093289.1 MGP_CBAJ_G0034815.1 mouse_genomes_project 9 106743774 106753632 + MGP_CBAJ_P0093289 Faim protein_coding protein_coding MGP_CBAJ_T0098472.1 MGP_CBAJ_G0036732.1 mouse_genomes_project 9 42574574 42574884 + Gm28119 sense_intronic sense_intronic MGP_CBAJ_T0091132.1 MGP_CBAJ_G0034178.1 mouse_genomes_project 9 32112072 32148843 - MGP_CBAJ_P0091132 Kcnj5 protein_coding protein_coding MGP_CBAJ_T0005406.1 MGP_CBAJ_G0004563.1 mouse_genomes_project 9 87613816 87725903 - Gm26907 antisense antisense MGP_CBAJ_T0091296.1 MGP_CBAJ_G0034226.1 mouse_genomes_project 9 38015888 38053994 + MGP_CBAJ_P0091296 Siae protein_coding protein_coding MGP_CBAJ_T0100920.1 MGP_CBAJ_G0039175.1 mouse_genomes_project 9 134389737 134389870 + Gm23323 snoRNA snoRNA MGP_CBAJ_T0091352.1 MGP_CBAJ_G0034271.1 mouse_genomes_project 9 39422544 39423612 + MGP_CBAJ_P0091352 Olfr923 protein_coding protein_coding MGP_CBAJ_T0091762.1 MGP_CBAJ_G0034433.1 mouse_genomes_project 9 52611394 52631149 - MGP_CBAJ_P0091762 Bco2 protein_coding unknown_likely_coding MGP_CBAJ_T0009128.1 MGP_CBAJ_G0007326.1 mouse_genomes_project 9 44660411 44661307 + Gm28215 lincRNA lincRNA MGP_CBAJ_T0092489.1 MGP_CBAJ_G0034640.1 mouse_genomes_project 9 71320445 71506743 - MGP_CBAJ_P0092489 Tln2 protein_coding unknown_likely_coding MGP_CBAJ_T0092490.1 MGP_CBAJ_G0034640.1 mouse_genomes_project 9 71320453 71690197 - MGP_CBAJ_P0092490 Tln2 protein_coding protein_coding MGP_CBAJ_T0092491.1 MGP_CBAJ_G0034640.1 mouse_genomes_project 9 71324471 71666854 - MGP_CBAJ_P0092491 Tln2 protein_coding protein_coding MGP_CBAJ_T0094584.1 MGP_CBAJ_G0035037.1 mouse_genomes_project 9 124508649 124588627 + MGP_CBAJ_P0094584 Glb1 protein_coding protein_coding MGP_CBAJ_T0091507.1 MGP_CBAJ_G0034349.1 mouse_genomes_project 9 45475233 45569554 - MGP_CBAJ_P0091507 Cbl protein_coding protein_coding MGP_CBAJ_T0091508.1 MGP_CBAJ_G0034349.1 mouse_genomes_project 9 45475355 45569607 - MGP_CBAJ_P0091508 Cbl protein_coding protein_coding MGP_CBAJ_T0091509.1 MGP_CBAJ_G0034349.1 mouse_genomes_project 9 45475356 45569547 - MGP_CBAJ_P0091509 Cbl protein_coding protein_coding MGP_CBAJ_T0091510.1 MGP_CBAJ_G0034349.1 mouse_genomes_project 9 45475361 45478517 - Cbl protein_coding processed_transcript MGP_CBAJ_T0091511.1 MGP_CBAJ_G0034349.1 mouse_genomes_project 9 45482521 45569542 - MGP_CBAJ_P0091511 Cbl protein_coding protein_coding MGP_CBAJ_T0091512.1 MGP_CBAJ_G0034349.1 mouse_genomes_project 9 45484157 45485357 - MGP_CBAJ_P0091512 Cbl protein_coding protein_coding MGP_CBAJ_T0091513.1 MGP_CBAJ_G0034349.1 mouse_genomes_project 9 45484716 45485330 - Cbl protein_coding retained_intron MGP_CBAJ_T0091514.1 MGP_CBAJ_G0034349.1 mouse_genomes_project 9 45484876 45488156 - Cbl protein_coding retained_intron MGP_CBAJ_T0091515.1 MGP_CBAJ_G0034349.1 mouse_genomes_project 9 45496747 45500583 - MGP_CBAJ_P0091515 Cbl protein_coding protein_coding MGP_CBAJ_T0091516.1 MGP_CBAJ_G0034349.1 mouse_genomes_project 9 45505472 45523134 - Cbl protein_coding processed_transcript MGP_CBAJ_T0091517.1 MGP_CBAJ_G0034349.1 mouse_genomes_project 9 45509829 45569102 - MGP_CBAJ_P0091517 Cbl protein_coding protein_coding MGP_CBAJ_T0094309.1 MGP_CBAJ_G0034990.1 mouse_genomes_project 9 119295504 119317148 + MGP_CBAJ_P0094309 Cdc25a protein_coding protein_coding MGP_CBAJ_T0094310.1 MGP_CBAJ_G0034990.1 mouse_genomes_project 9 119295865 119304186 + MGP_CBAJ_P0094310 Cdc25a protein_coding nonsense_mediated_decay MGP_CBAJ_T0094311.1 MGP_CBAJ_G0034990.1 mouse_genomes_project 9 119296231 119315901 + MGP_CBAJ_P0094311 Cdc25a protein_coding protein_coding MGP_CBAJ_T0094313.1 MGP_CBAJ_G0034990.1 mouse_genomes_project 9 119307375 119313249 + Cdc25a protein_coding retained_intron MGP_CBAJ_T0094314.1 MGP_CBAJ_G0034990.1 mouse_genomes_project 9 119310770 119315614 + Cdc25a protein_coding retained_intron MGP_CBAJ_T0094315.1 MGP_CBAJ_G0034990.1 mouse_genomes_project 9 119312073 119312608 + Cdc25a protein_coding retained_intron MGP_CBAJ_T0092158.1 MGP_CBAJ_G0034554.1 mouse_genomes_project 9 62631900 62640912 - MGP_CBAJ_P0092158 Tmem202 protein_coding protein_coding MGP_CBAJ_T0092813.1 MGP_CBAJ_G0034711.1 mouse_genomes_project 9 83426512 83456509 - MGP_CBAJ_P0092813 Fbxo9 protein_coding protein_coding MGP_CBAJ_T0092814.1 MGP_CBAJ_G0034711.1 mouse_genomes_project 9 83426515 83456918 - MGP_CBAJ_P0092814 Fbxo9 protein_coding protein_coding MGP_CBAJ_T0092815.1 MGP_CBAJ_G0034711.1 mouse_genomes_project 9 83426854 83432725 - Fbxo9 protein_coding retained_intron MGP_CBAJ_T0092816.1 MGP_CBAJ_G0034711.1 mouse_genomes_project 9 83433691 83435530 - Fbxo9 protein_coding retained_intron MGP_CBAJ_T0092817.1 MGP_CBAJ_G0034711.1 mouse_genomes_project 9 83443383 83456457 - MGP_CBAJ_P0092817 Fbxo9 protein_coding protein_coding MGP_CBAJ_T0092818.1 MGP_CBAJ_G0034711.1 mouse_genomes_project 9 83447644 83456440 - MGP_CBAJ_P0092818 Fbxo9 protein_coding protein_coding MGP_CBAJ_T0092151.1 MGP_CBAJ_G0034553.1 mouse_genomes_project 9 62489938 62595461 - MGP_CBAJ_P0092151 Arih1 protein_coding protein_coding MGP_CBAJ_T0092152.1 MGP_CBAJ_G0034553.1 mouse_genomes_project 9 62494791 62595465 - MGP_CBAJ_P0092152 Arih1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092153.1 MGP_CBAJ_G0034553.1 mouse_genomes_project 9 62494972 62595194 - MGP_CBAJ_P0092153 Arih1 protein_coding protein_coding MGP_CBAJ_T0092154.1 MGP_CBAJ_G0034553.1 mouse_genomes_project 9 62496554 62507467 - MGP_CBAJ_P0092154 Arih1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092155.1 MGP_CBAJ_G0034553.1 mouse_genomes_project 9 62496639 62507725 - Arih1 protein_coding retained_intron MGP_CBAJ_T0092156.1 MGP_CBAJ_G0034553.1 mouse_genomes_project 9 62531435 62594903 - Arih1 protein_coding retained_intron MGP_CBAJ_T0092157.1 MGP_CBAJ_G0034553.1 mouse_genomes_project 9 62542272 62594930 - Arih1 protein_coding retained_intron MGP_CBAJ_T0094066.1 MGP_CBAJ_G0034951.1 mouse_genomes_project 9 117443580 117444226 + MGP_CBAJ_P0094066 Lamb2 protein_coding protein_coding MGP_CBAJ_T0094067.1 MGP_CBAJ_G0034951.1 mouse_genomes_project 9 117443701 117454426 + MGP_CBAJ_P0094067 Lamb2 protein_coding protein_coding MGP_CBAJ_T0094068.1 MGP_CBAJ_G0034951.1 mouse_genomes_project 9 117443716 117444498 + MGP_CBAJ_P0094068 Lamb2 protein_coding protein_coding MGP_CBAJ_T0094069.1 MGP_CBAJ_G0034951.1 mouse_genomes_project 9 117443722 117444431 + MGP_CBAJ_P0094069 Lamb2 protein_coding protein_coding MGP_CBAJ_T0094070.1 MGP_CBAJ_G0034951.1 mouse_genomes_project 9 117443725 117444029 + Lamb2 protein_coding retained_intron MGP_CBAJ_T0094071.1 MGP_CBAJ_G0034951.1 mouse_genomes_project 9 117451710 117452564 + Lamb2 protein_coding retained_intron MGP_CBAJ_T0094072.1 MGP_CBAJ_G0034951.1 mouse_genomes_project 9 117452769 117453428 + Lamb2 protein_coding retained_intron MGP_CBAJ_T0091868.1 MGP_CBAJ_G0034463.1 mouse_genomes_project 9 55708420 55726081 + MGP_CBAJ_P0091868 Kdelc2 protein_coding protein_coding MGP_CBAJ_T0094900.1 MGP_CBAJ_G0035144.1 mouse_genomes_project 9 135862521 135867718 + MGP_CBAJ_P0094900 Nlrp4g protein_coding protein_coding MGP_CBAJ_T0092309.1 MGP_CBAJ_G0034590.1 mouse_genomes_project 9 67815157 67820476 + MGP_CBAJ_P0092309 Rpl4 protein_coding protein_coding MGP_CBAJ_T0092926.1 MGP_CBAJ_G0034739.1 mouse_genomes_project 9 89115587 89116465 - Hmgn3 protein_coding processed_transcript MGP_CBAJ_T0092927.1 MGP_CBAJ_G0034739.1 mouse_genomes_project 9 89115587 89167422 - MGP_CBAJ_P0092927 Hmgn3 protein_coding protein_coding MGP_CBAJ_T0092928.1 MGP_CBAJ_G0034739.1 mouse_genomes_project 9 89115587 89167502 - MGP_CBAJ_P0092928 Hmgn3 protein_coding protein_coding MGP_CBAJ_T0092929.1 MGP_CBAJ_G0034739.1 mouse_genomes_project 9 89115587 89167287 - MGP_CBAJ_P0092929 Hmgn3 protein_coding protein_coding MGP_CBAJ_T0092930.1 MGP_CBAJ_G0034739.1 mouse_genomes_project 9 89115587 89167347 - MGP_CBAJ_P0092930 Hmgn3 protein_coding protein_coding MGP_CBAJ_T0092931.1 MGP_CBAJ_G0034739.1 mouse_genomes_project 9 89115607 89116771 - Hmgn3 protein_coding retained_intron MGP_CBAJ_T0092932.1 MGP_CBAJ_G0034739.1 mouse_genomes_project 9 89115820 89118210 - Hmgn3 protein_coding retained_intron MGP_CBAJ_T0092933.1 MGP_CBAJ_G0034739.1 mouse_genomes_project 9 89116017 89167334 - MGP_CBAJ_P0092933 Hmgn3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092934.1 MGP_CBAJ_G0034739.1 mouse_genomes_project 9 89116359 89116733 - Hmgn3 protein_coding retained_intron MGP_CBAJ_T0005361.1 MGP_CBAJ_G0004535.1 mouse_genomes_project 9 54036423 54078649 - Arhgap20os antisense antisense MGP_CBAJ_T0005362.1 MGP_CBAJ_G0004535.1 mouse_genomes_project 9 54043124 54078560 - Arhgap20os antisense antisense MGP_CBAJ_T0005363.1 MGP_CBAJ_G0004535.1 mouse_genomes_project 9 54043132 54078648 - Arhgap20os antisense antisense MGP_CBAJ_T0005364.1 MGP_CBAJ_G0004535.1 mouse_genomes_project 9 54043989 54078545 - Arhgap20os antisense antisense MGP_CBAJ_T0005466.1 MGP_CBAJ_G0004606.1 mouse_genomes_project 9 119437458 119440335 - Gm43732 antisense antisense MGP_CBAJ_T0091767.1 MGP_CBAJ_G0034437.1 mouse_genomes_project 9 52693096 52694516 + MGP_CBAJ_P0091767 Timm8b protein_coding protein_coding MGP_CBAJ_T0100847.1 MGP_CBAJ_G0039102.1 mouse_genomes_project 9 13287778 13287909 + Gm24455 snoRNA snoRNA MGP_CBAJ_T0091864.1 MGP_CBAJ_G0034461.1 mouse_genomes_project 9 55386819 55554741 - MGP_CBAJ_P0091864 Ddx10 protein_coding protein_coding MGP_CBAJ_T0005452.1 MGP_CBAJ_G0004595.1 mouse_genomes_project 9 116387626 116390826 - Gm34106 antisense antisense MGP_CBAJ_T0094587.1 MGP_CBAJ_G0035040.1 mouse_genomes_project 9 124628415 124692212 - MGP_CBAJ_P0094587 Trim71 protein_coding protein_coding MGP_CBAJ_T0009171.1 MGP_CBAJ_G0007360.1 mouse_genomes_project 9 82270250 82275512 + Gm19541 lincRNA lincRNA MGP_CBAJ_T0015880.1 MGP_CBAJ_G0013992.1 mouse_genomes_project 9 98049418 98049860 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002365.1 MGP_CBAJ_G0002277.1 mouse_genomes_project 9 94182328 94185134 + TEC TEC MGP_CBAJ_T0091323.1 MGP_CBAJ_G0034248.1 mouse_genomes_project 9 38874504 38875572 + MGP_CBAJ_P0091323 Olfr25 protein_coding protein_coding MGP_CBAJ_T0010911.1 MGP_CBAJ_G0009049.1 mouse_genomes_project 9 7099960 7100061 - Gm26195 miRNA miRNA MGP_CBAJ_T0093132.1 MGP_CBAJ_G0034779.1 mouse_genomes_project 9 99269969 99278348 + MGP_CBAJ_P0093132 Plscr2 protein_coding protein_coding MGP_CBAJ_T0093133.1 MGP_CBAJ_G0034779.1 mouse_genomes_project 9 99278275 99295732 + MGP_CBAJ_P0093133 Plscr2 protein_coding protein_coding MGP_CBAJ_T0093134.1 MGP_CBAJ_G0034779.1 mouse_genomes_project 9 99286927 99288671 + Plscr2 protein_coding retained_intron MGP_CBAJ_T0002410.1 MGP_CBAJ_G0002322.1 mouse_genomes_project 9 112386991 112389163 - TEC TEC MGP_CBAJ_T0092047.1 MGP_CBAJ_G0034521.1 mouse_genomes_project 9 60352884 60364047 + MGP_CBAJ_P0092047 Cox5a protein_coding protein_coding MGP_CBAJ_T0018240.1 MGP_CBAJ_G0015472.1 mouse_genomes_project 9 19883125 19887120 + Gm16754 processed_transcript retained_intron MGP_CBAJ_T0018241.1 MGP_CBAJ_G0015472.1 mouse_genomes_project 9 19883125 19893122 + Gm16754 processed_transcript antisense MGP_CBAJ_T0018242.1 MGP_CBAJ_G0015472.1 mouse_genomes_project 9 19883157 19893529 + Gm16754 processed_transcript antisense MGP_CBAJ_T0005401.1 MGP_CBAJ_G0004562.1 mouse_genomes_project 9 87453619 87469655 + D430036J16Rik antisense antisense MGP_CBAJ_T0005402.1 MGP_CBAJ_G0004562.1 mouse_genomes_project 9 87453998 87470182 + D430036J16Rik antisense antisense MGP_CBAJ_T0005403.1 MGP_CBAJ_G0004562.1 mouse_genomes_project 9 87454101 87469223 + D430036J16Rik antisense antisense MGP_CBAJ_T0005404.1 MGP_CBAJ_G0004562.1 mouse_genomes_project 9 87454426 87470111 + D430036J16Rik antisense antisense MGP_CBAJ_T0005405.1 MGP_CBAJ_G0004562.1 mouse_genomes_project 9 87454486 87469381 + D430036J16Rik antisense antisense MGP_CBAJ_T0100891.1 MGP_CBAJ_G0039146.1 mouse_genomes_project 9 81907563 81907683 - Gm22938 snoRNA snoRNA MGP_CBAJ_T0091163.1 MGP_CBAJ_G0034187.1 mouse_genomes_project 9 35270704 35277439 - MGP_CBAJ_P0091163 Foxred1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091164.1 MGP_CBAJ_G0034187.1 mouse_genomes_project 9 35270706 35277457 - Foxred1 protein_coding retained_intron MGP_CBAJ_T0091165.1 MGP_CBAJ_G0034187.1 mouse_genomes_project 9 35270706 35277473 - Foxred1 protein_coding retained_intron MGP_CBAJ_T0091166.1 MGP_CBAJ_G0034187.1 mouse_genomes_project 9 35270706 35277504 - MGP_CBAJ_P0091166 Foxred1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091167.1 MGP_CBAJ_G0034187.1 mouse_genomes_project 9 35270706 35277483 - MGP_CBAJ_P0091167 Foxred1 protein_coding protein_coding MGP_CBAJ_T0091168.1 MGP_CBAJ_G0034187.1 mouse_genomes_project 9 35270706 35277558 - MGP_CBAJ_P0091168 Foxred1 protein_coding protein_coding MGP_CBAJ_T0091169.1 MGP_CBAJ_G0034187.1 mouse_genomes_project 9 35271364 35272421 - Foxred1 protein_coding retained_intron MGP_CBAJ_T0091170.1 MGP_CBAJ_G0034187.1 mouse_genomes_project 9 35271683 35272733 - MGP_CBAJ_P0091170 Foxred1 protein_coding protein_coding MGP_CBAJ_T0091171.1 MGP_CBAJ_G0034187.1 mouse_genomes_project 9 35272585 35277449 - Foxred1 protein_coding retained_intron MGP_CBAJ_T0091172.1 MGP_CBAJ_G0034187.1 mouse_genomes_project 9 35272721 35277499 - MGP_CBAJ_P0091172 Foxred1 protein_coding protein_coding MGP_CBAJ_T0091173.1 MGP_CBAJ_G0034187.1 mouse_genomes_project 9 35274036 35277425 - MGP_CBAJ_P0091173 Foxred1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091174.1 MGP_CBAJ_G0034187.1 mouse_genomes_project 9 35274046 35277400 - MGP_CBAJ_P0091174 Foxred1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090999.1 MGP_CBAJ_G0034133.1 mouse_genomes_project 9 20975308 20980443 - MGP_CBAJ_P0090999 Acp5 protein_coding protein_coding MGP_CBAJ_T0091000.1 MGP_CBAJ_G0034133.1 mouse_genomes_project 9 20975308 20984360 - MGP_CBAJ_P0091000 Acp5 protein_coding protein_coding MGP_CBAJ_T0091001.1 MGP_CBAJ_G0034133.1 mouse_genomes_project 9 20975308 20979176 - MGP_CBAJ_P0091001 Acp5 protein_coding protein_coding MGP_CBAJ_T0092374.1 MGP_CBAJ_G0034616.1 mouse_genomes_project 9 69423451 69453858 - MGP_CBAJ_P0092374 Plekho2 protein_coding protein_coding MGP_CBAJ_T0090978.1 MGP_CBAJ_G0034122.1 mouse_genomes_project 9 20749920 20764498 + MGP_CBAJ_P0090978 Plppr2 protein_coding protein_coding MGP_CBAJ_T0090979.1 MGP_CBAJ_G0034122.1 mouse_genomes_project 9 20751320 20763604 + MGP_CBAJ_P0090979 Plppr2 protein_coding protein_coding MGP_CBAJ_T0092972.1 MGP_CBAJ_G0034747.1 mouse_genomes_project 9 92186882 92191593 + MGP_CBAJ_P0092972 Tpbg protein_coding protein_coding MGP_CBAJ_T0092973.1 MGP_CBAJ_G0034747.1 mouse_genomes_project 9 92187367 92191593 + MGP_CBAJ_P0092973 Tpbg protein_coding protein_coding MGP_CBAJ_T0092974.1 MGP_CBAJ_G0034747.1 mouse_genomes_project 9 92187884 92188449 + Tpbg protein_coding processed_transcript MGP_CBAJ_T0010918.1 MGP_CBAJ_G0009056.1 mouse_genomes_project 9 19521536 19521611 - Mir7081 miRNA miRNA MGP_CBAJ_T0002431.1 MGP_CBAJ_G0002343.1 mouse_genomes_project 9 120078700 120080790 + TEC TEC MGP_CBAJ_T0092343.1 MGP_CBAJ_G0034598.1 mouse_genomes_project 9 68565510 68683315 + MGP_CBAJ_P0092343 Dennd4a protein_coding protein_coding MGP_CBAJ_T0009146.1 MGP_CBAJ_G0007341.1 mouse_genomes_project 9 61444227 61461650 + 4930461G14Rik lincRNA lincRNA MGP_CBAJ_T0018293.1 MGP_CBAJ_G0015489.1 mouse_genomes_project 9 89166730 89168170 + Gm29054 processed_transcript TEC MGP_CBAJ_T0018294.1 MGP_CBAJ_G0015489.1 mouse_genomes_project 9 89166761 89168088 + Gm29054 processed_transcript antisense MGP_CBAJ_T0092699.1 MGP_CBAJ_G0034681.1 mouse_genomes_project 9 77844609 77845661 + MGP_CBAJ_P0092699 Khdc3 protein_coding protein_coding MGP_CBAJ_T0092700.1 MGP_CBAJ_G0034681.1 mouse_genomes_project 9 77845171 77847212 + MGP_CBAJ_P0092700 Khdc3 protein_coding protein_coding MGP_CBAJ_T0092701.1 MGP_CBAJ_G0034681.1 mouse_genomes_project 9 77845171 77847212 + MGP_CBAJ_P0092701 Khdc3 protein_coding protein_coding MGP_CBAJ_T0092703.1 MGP_CBAJ_G0034681.1 mouse_genomes_project 9 77845283 77846966 + MGP_CBAJ_P0092703 Khdc3 protein_coding protein_coding MGP_CBAJ_T0005450.1 MGP_CBAJ_G0004593.1 mouse_genomes_project 9 116261234 116267945 - Gm17141 antisense antisense MGP_CBAJ_T0015805.1 MGP_CBAJ_G0013917.1 mouse_genomes_project 9 36741489 36741688 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0092888.1 MGP_CBAJ_G0034733.1 mouse_genomes_project 9 85875369 86038173 + MGP_CBAJ_P0092888 Myo6 protein_coding protein_coding MGP_CBAJ_T0092889.1 MGP_CBAJ_G0034733.1 mouse_genomes_project 9 85875376 85878372 + Myo6 protein_coding retained_intron MGP_CBAJ_T0092890.1 MGP_CBAJ_G0034733.1 mouse_genomes_project 9 85875378 86038172 + MGP_CBAJ_P0092890 Myo6 protein_coding protein_coding MGP_CBAJ_T0092891.1 MGP_CBAJ_G0034733.1 mouse_genomes_project 9 85875565 86034539 + MGP_CBAJ_P0092891 Myo6 protein_coding protein_coding MGP_CBAJ_T0092892.1 MGP_CBAJ_G0034733.1 mouse_genomes_project 9 85937589 86034492 + MGP_CBAJ_P0092892 Myo6 protein_coding protein_coding MGP_CBAJ_T0092893.1 MGP_CBAJ_G0034733.1 mouse_genomes_project 9 85937607 86038173 + MGP_CBAJ_P0092893 Myo6 protein_coding protein_coding MGP_CBAJ_T0092894.1 MGP_CBAJ_G0034733.1 mouse_genomes_project 9 85937615 86038173 + MGP_CBAJ_P0092894 Myo6 protein_coding protein_coding MGP_CBAJ_T0092895.1 MGP_CBAJ_G0034733.1 mouse_genomes_project 9 85988923 85993526 + Myo6 protein_coding retained_intron MGP_CBAJ_T0092896.1 MGP_CBAJ_G0034733.1 mouse_genomes_project 9 86012248 86013343 + Myo6 protein_coding retained_intron MGP_CBAJ_T0092897.1 MGP_CBAJ_G0034733.1 mouse_genomes_project 9 86013115 86019440 + Myo6 protein_coding retained_intron MGP_CBAJ_T0092898.1 MGP_CBAJ_G0034733.1 mouse_genomes_project 9 86032206 86034237 + Myo6 protein_coding processed_transcript MGP_CBAJ_T0092899.1 MGP_CBAJ_G0034733.1 mouse_genomes_project 9 86033355 86035045 + Myo6 protein_coding retained_intron MGP_CBAJ_T0091301.1 MGP_CBAJ_G0034228.1 mouse_genomes_project 9 38071072 38084162 - MGP_CBAJ_P0091301 Panx3 protein_coding protein_coding MGP_CBAJ_T0091302.1 MGP_CBAJ_G0034228.1 mouse_genomes_project 9 38079169 38084113 - MGP_CBAJ_P0091302 Panx3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0009215.1 MGP_CBAJ_G0007395.1 mouse_genomes_project 9 110762821 110772527 + Gm29387 lincRNA lincRNA MGP_CBAJ_T0090810.1 MGP_CBAJ_G0034060.1 mouse_genomes_project 9 18325599 18343721 - MGP_CBAJ_P0090810 protein_coding protein_coding MGP_CBAJ_T0092944.1 MGP_CBAJ_G0034741.1 mouse_genomes_project 9 89619317 89721746 + MGP_CBAJ_P0092944 Sh3bgrl2 protein_coding protein_coding MGP_CBAJ_T0092945.1 MGP_CBAJ_G0034741.1 mouse_genomes_project 9 89619318 89680212 + MGP_CBAJ_P0092945 Sh3bgrl2 protein_coding protein_coding MGP_CBAJ_T0092946.1 MGP_CBAJ_G0034741.1 mouse_genomes_project 9 89619319 89620002 + Sh3bgrl2 protein_coding retained_intron MGP_CBAJ_T0092947.1 MGP_CBAJ_G0034741.1 mouse_genomes_project 9 89619340 89719466 + MGP_CBAJ_P0092947 Sh3bgrl2 protein_coding protein_coding MGP_CBAJ_T0092948.1 MGP_CBAJ_G0034741.1 mouse_genomes_project 9 89648706 89677442 + MGP_CBAJ_P0092948 Sh3bgrl2 protein_coding protein_coding MGP_CBAJ_T0092857.1 MGP_CBAJ_G0034727.1 mouse_genomes_project 9 84151231 84256982 + MGP_CBAJ_P0092857 Cd109 protein_coding protein_coding MGP_CBAJ_T0092858.1 MGP_CBAJ_G0034727.1 mouse_genomes_project 9 84151448 84153777 + Cd109 protein_coding processed_transcript MGP_CBAJ_T0092859.1 MGP_CBAJ_G0034727.1 mouse_genomes_project 9 84151567 84255787 + MGP_CBAJ_P0092859 Cd109 protein_coding unknown_likely_coding MGP_CBAJ_T0092977.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92845244 92931275 + MGP_CBAJ_P0092977 Dopey1 protein_coding protein_coding MGP_CBAJ_T0092978.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92845260 92886313 + Dopey1 protein_coding retained_intron MGP_CBAJ_T0092979.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92845267 92920787 + MGP_CBAJ_P0092979 Dopey1 protein_coding unknown_likely_coding MGP_CBAJ_T0092980.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92845267 92929673 + MGP_CBAJ_P0092980 Dopey1 protein_coding unknown_likely_coding MGP_CBAJ_T0092981.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92845269 92881208 + Dopey1 protein_coding retained_intron MGP_CBAJ_T0092982.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92845301 92882332 + Dopey1 protein_coding retained_intron MGP_CBAJ_T0092983.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92845301 92891053 + MGP_CBAJ_P0092983 Dopey1 protein_coding protein_coding MGP_CBAJ_T0092984.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92845304 92931156 + MGP_CBAJ_P0092984 Dopey1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092985.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92863498 92931158 + MGP_CBAJ_P0092985 Dopey1 protein_coding protein_coding MGP_CBAJ_T0092986.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92865355 92868161 + Dopey1 protein_coding retained_intron MGP_CBAJ_T0092987.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92867689 92870591 + Dopey1 protein_coding retained_intron MGP_CBAJ_T0092988.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92875064 92879035 + Dopey1 protein_coding retained_intron MGP_CBAJ_T0092989.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92881678 92885589 + Dopey1 protein_coding retained_intron MGP_CBAJ_T0092990.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92881970 92894394 + Dopey1 protein_coding retained_intron MGP_CBAJ_T0092991.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92899149 92903094 + MGP_CBAJ_P0092991 Dopey1 protein_coding protein_coding MGP_CBAJ_T0092992.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92901500 92921846 + Dopey1 protein_coding retained_intron MGP_CBAJ_T0092993.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92907779 92929977 + Dopey1 protein_coding retained_intron MGP_CBAJ_T0092994.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92909205 92929982 + MGP_CBAJ_P0092994 Dopey1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092995.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92918180 92924473 + Dopey1 protein_coding retained_intron MGP_CBAJ_T0092996.1 MGP_CBAJ_G0034749.1 mouse_genomes_project 9 92924972 92929982 + Dopey1 protein_coding retained_intron MGP_CBAJ_T0091707.1 MGP_CBAJ_G0034409.1 mouse_genomes_project 9 47914884 47936457 - MGP_CBAJ_P0091707 4931429L15Rik protein_coding protein_coding MGP_CBAJ_T0091708.1 MGP_CBAJ_G0034409.1 mouse_genomes_project 9 47915542 47925685 - MGP_CBAJ_P0091708 4931429L15Rik protein_coding protein_coding MGP_CBAJ_T0091709.1 MGP_CBAJ_G0034409.1 mouse_genomes_project 9 47924394 47930036 - MGP_CBAJ_P0091709 4931429L15Rik protein_coding protein_coding MGP_CBAJ_T0093173.1 MGP_CBAJ_G0034790.1 mouse_genomes_project 9 103125865 103245210 - MGP_CBAJ_P0093173 Pls1 protein_coding protein_coding MGP_CBAJ_T0093174.1 MGP_CBAJ_G0034790.1 mouse_genomes_project 9 103159157 103208137 - MGP_CBAJ_P0093174 Pls1 protein_coding protein_coding MGP_CBAJ_T0093175.1 MGP_CBAJ_G0034790.1 mouse_genomes_project 9 103160530 103245235 - Pls1 protein_coding processed_transcript MGP_CBAJ_T0090701.1 MGP_CBAJ_G0034007.1 mouse_genomes_project 9 12424310 12501543 - MGP_CBAJ_P0090701 Amotl1 protein_coding protein_coding MGP_CBAJ_T0090702.1 MGP_CBAJ_G0034007.1 mouse_genomes_project 9 12430142 12520522 - MGP_CBAJ_P0090702 Amotl1 protein_coding protein_coding MGP_CBAJ_T0090703.1 MGP_CBAJ_G0034007.1 mouse_genomes_project 9 12438034 12441413 - Amotl1 protein_coding retained_intron MGP_CBAJ_T0090704.1 MGP_CBAJ_G0034007.1 mouse_genomes_project 9 12480306 12502026 - MGP_CBAJ_P0090704 Amotl1 protein_coding protein_coding MGP_CBAJ_T0090705.1 MGP_CBAJ_G0034007.1 mouse_genomes_project 9 12480340 12501129 - MGP_CBAJ_P0090705 Amotl1 protein_coding protein_coding MGP_CBAJ_T0091892.1 MGP_CBAJ_G0034470.1 mouse_genomes_project 9 56132046 56187981 + MGP_CBAJ_P0091892 Slc35f2 protein_coding protein_coding MGP_CBAJ_T0092357.1 MGP_CBAJ_G0034607.1 mouse_genomes_project 9 69116136 69156518 + MGP_CBAJ_P0092357 Clpx protein_coding protein_coding MGP_CBAJ_T0092358.1 MGP_CBAJ_G0034607.1 mouse_genomes_project 9 69116171 69156519 + MGP_CBAJ_P0092358 Clpx protein_coding protein_coding MGP_CBAJ_T0092359.1 MGP_CBAJ_G0034607.1 mouse_genomes_project 9 69116208 69131093 + Clpx protein_coding retained_intron MGP_CBAJ_T0092360.1 MGP_CBAJ_G0034607.1 mouse_genomes_project 9 69132002 69144620 + MGP_CBAJ_P0092360 Clpx protein_coding protein_coding MGP_CBAJ_T0092240.1 MGP_CBAJ_G0034574.1 mouse_genomes_project 9 65738258 65776310 + Anp32a protein_coding processed_transcript MGP_CBAJ_T0092241.1 MGP_CBAJ_G0034574.1 mouse_genomes_project 9 65738294 65777437 + MGP_CBAJ_P0092241 Anp32a protein_coding protein_coding MGP_CBAJ_T0092242.1 MGP_CBAJ_G0034574.1 mouse_genomes_project 9 65738866 65773341 + MGP_CBAJ_P0092242 Anp32a protein_coding protein_coding MGP_CBAJ_T0092243.1 MGP_CBAJ_G0034574.1 mouse_genomes_project 9 65739039 65776281 + MGP_CBAJ_P0092243 Anp32a protein_coding protein_coding MGP_CBAJ_T0092244.1 MGP_CBAJ_G0034574.1 mouse_genomes_project 9 65739428 65772206 + MGP_CBAJ_P0092244 Anp32a protein_coding protein_coding MGP_CBAJ_T0092245.1 MGP_CBAJ_G0034574.1 mouse_genomes_project 9 65741027 65772219 + Anp32a protein_coding processed_transcript MGP_CBAJ_T0092246.1 MGP_CBAJ_G0034574.1 mouse_genomes_project 9 65741758 65773338 + Anp32a protein_coding processed_transcript MGP_CBAJ_T0092247.1 MGP_CBAJ_G0034574.1 mouse_genomes_project 9 65765578 65772299 + Anp32a protein_coding processed_transcript MGP_CBAJ_T0092248.1 MGP_CBAJ_G0034574.1 mouse_genomes_project 9 65765584 65775916 + Anp32a protein_coding processed_transcript MGP_CBAJ_T0092249.1 MGP_CBAJ_G0034574.1 mouse_genomes_project 9 65772061 65776406 + Anp32a protein_coding retained_intron MGP_CBAJ_T0002403.1 MGP_CBAJ_G0002315.1 mouse_genomes_project 9 110473977 110475226 + TEC TEC MGP_CBAJ_T0091730.1 MGP_CBAJ_G0034418.1 mouse_genomes_project 9 50440395 50445895 - Nnmt protein_coding processed_transcript MGP_CBAJ_T0091731.1 MGP_CBAJ_G0034418.1 mouse_genomes_project 9 50440395 50454680 - MGP_CBAJ_P0091731 Nnmt protein_coding protein_coding MGP_CBAJ_T0091732.1 MGP_CBAJ_G0034418.1 mouse_genomes_project 9 50440395 50454680 - MGP_CBAJ_P0091732 Nnmt protein_coding protein_coding MGP_CBAJ_T0091733.1 MGP_CBAJ_G0034418.1 mouse_genomes_project 9 50440409 50445969 - Nnmt protein_coding processed_transcript MGP_CBAJ_T0091734.1 MGP_CBAJ_G0034418.1 mouse_genomes_project 9 50452842 50454604 - Nnmt protein_coding retained_intron MGP_CBAJ_T0091398.1 MGP_CBAJ_G0034311.1 mouse_genomes_project 9 40695160 40697973 - MGP_CBAJ_P0091398 Olfr976 protein_coding protein_coding MGP_CBAJ_T0005444.1 MGP_CBAJ_G0004589.1 mouse_genomes_project 9 115172883 115173621 - Gm28959 antisense antisense MGP_CBAJ_T0101194.1 MGP_CBAJ_G0039357.1 mouse_genomes_project 9 83923313 83925133 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101195.1 MGP_CBAJ_G0039357.1 mouse_genomes_project 9 83923628 83925707 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101196.1 MGP_CBAJ_G0039357.1 mouse_genomes_project 9 83924179 83929005 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0090622.1 MGP_CBAJ_G0033982.1 mouse_genomes_project 9 4765053 4812092 + MGP_CBAJ_P0090622 Mmp20 protein_coding protein_coding MGP_CBAJ_T0092908.1 MGP_CBAJ_G0034737.1 mouse_genomes_project 9 88803304 88822356 + MGP_CBAJ_P0092908 Irak1bp1 protein_coding protein_coding MGP_CBAJ_T0092909.1 MGP_CBAJ_G0034737.1 mouse_genomes_project 9 88803570 88821802 + MGP_CBAJ_P0092909 Irak1bp1 protein_coding protein_coding MGP_CBAJ_T0093259.1 MGP_CBAJ_G0034802.1 mouse_genomes_project 9 104950143 104970627 - MGP_CBAJ_P0093259 Trim42 protein_coding protein_coding MGP_CBAJ_T0091550.1 MGP_CBAJ_G0034365.1 mouse_genomes_project 9 45807564 45814199 - MGP_CBAJ_P0091550 Foxr1 protein_coding protein_coding MGP_CBAJ_T0100914.1 MGP_CBAJ_G0039169.1 mouse_genomes_project 9 122295180 122295312 + Gm24957 snoRNA snoRNA MGP_CBAJ_T0099634.1 MGP_CBAJ_G0037889.1 mouse_genomes_project 9 98759139 98759244 + Gm26101 snRNA snRNA MGP_CBAJ_T0094730.1 MGP_CBAJ_G0035089.1 mouse_genomes_project 9 131491787 131498814 + MGP_CBAJ_P0094730 Rpl14 protein_coding protein_coding MGP_CBAJ_T0094731.1 MGP_CBAJ_G0035089.1 mouse_genomes_project 9 131491809 131495860 + MGP_CBAJ_P0094731 Rpl14 protein_coding unknown_likely_coding MGP_CBAJ_T0011616.1 MGP_CBAJ_G0009754.1 mouse_genomes_project 9 96734214 96734482 + Gm23759 misc_RNA misc_RNA MGP_CBAJ_T0100901.1 MGP_CBAJ_G0039156.1 mouse_genomes_project 9 105053423 105053550 - Gm25607 snoRNA snoRNA MGP_CBAJ_T0093306.1 MGP_CBAJ_G0034820.1 mouse_genomes_project 9 107093528 107152715 - MGP_CBAJ_P0093306 Esyt3 protein_coding protein_coding MGP_CBAJ_T0093307.1 MGP_CBAJ_G0034820.1 mouse_genomes_project 9 107108278 107114367 - Esyt3 protein_coding retained_intron MGP_CBAJ_T0093308.1 MGP_CBAJ_G0034820.1 mouse_genomes_project 9 107108322 107116674 - MGP_CBAJ_P0093308 Esyt3 protein_coding protein_coding MGP_CBAJ_T0093309.1 MGP_CBAJ_G0034820.1 mouse_genomes_project 9 107124599 107133104 - Esyt3 protein_coding retained_intron MGP_CBAJ_T0093310.1 MGP_CBAJ_G0034820.1 mouse_genomes_project 9 107149794 107152754 - Esyt3 protein_coding retained_intron MGP_CBAJ_T0092975.1 MGP_CBAJ_G0034748.1 mouse_genomes_project 9 92692553 92843041 - MGP_CBAJ_P0092975 Ube2cbp protein_coding protein_coding MGP_CBAJ_T0092976.1 MGP_CBAJ_G0034748.1 mouse_genomes_project 9 92692989 92843041 - MGP_CBAJ_P0092976 Ube2cbp protein_coding nonsense_mediated_decay MGP_CBAJ_T0091952.1 MGP_CBAJ_G0034494.1 mouse_genomes_project 9 57766556 57834368 - Nrg4 protein_coding processed_transcript MGP_CBAJ_T0091953.1 MGP_CBAJ_G0034494.1 mouse_genomes_project 9 57766557 57834398 - MGP_CBAJ_P0091953 Nrg4 protein_coding protein_coding MGP_CBAJ_T0091954.1 MGP_CBAJ_G0034494.1 mouse_genomes_project 9 57767554 57789815 - Nrg4 protein_coding processed_transcript MGP_CBAJ_T0091955.1 MGP_CBAJ_G0034494.1 mouse_genomes_project 9 57767630 57834360 - MGP_CBAJ_P0091955 Nrg4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091956.1 MGP_CBAJ_G0034494.1 mouse_genomes_project 9 57767633 57880994 - MGP_CBAJ_P0091956 Nrg4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091957.1 MGP_CBAJ_G0034494.1 mouse_genomes_project 9 57767634 57834345 - MGP_CBAJ_P0091957 Nrg4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091958.1 MGP_CBAJ_G0034494.1 mouse_genomes_project 9 57767698 57834354 - Nrg4 protein_coding processed_transcript MGP_CBAJ_T0091959.1 MGP_CBAJ_G0034494.1 mouse_genomes_project 9 57771612 57834345 - MGP_CBAJ_P0091959 Nrg4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091960.1 MGP_CBAJ_G0034494.1 mouse_genomes_project 9 57788053 57834375 - MGP_CBAJ_P0091960 Nrg4 protein_coding protein_coding MGP_CBAJ_T0091961.1 MGP_CBAJ_G0034494.1 mouse_genomes_project 9 57789417 57881089 - Nrg4 protein_coding processed_transcript MGP_CBAJ_T0091962.1 MGP_CBAJ_G0034494.1 mouse_genomes_project 9 57796513 57834360 - Nrg4 protein_coding processed_transcript MGP_CBAJ_T0091963.1 MGP_CBAJ_G0034494.1 mouse_genomes_project 9 57805914 57834371 - Nrg4 protein_coding processed_transcript MGP_CBAJ_T0091964.1 MGP_CBAJ_G0034494.1 mouse_genomes_project 9 57857886 57876848 - Nrg4 protein_coding processed_transcript MGP_CBAJ_T0002408.1 MGP_CBAJ_G0002320.1 mouse_genomes_project 9 111857161 111859311 - TEC TEC MGP_CBAJ_T0005462.1 MGP_CBAJ_G0004602.1 mouse_genomes_project 9 116897541 116905692 - Gm38134 antisense antisense MGP_CBAJ_T0093213.1 MGP_CBAJ_G0034795.1 mouse_genomes_project 9 103797183 103830505 - MGP_CBAJ_P0093213 Atp1b3 protein_coding protein_coding MGP_CBAJ_T0093214.1 MGP_CBAJ_G0034795.1 mouse_genomes_project 9 103803181 103808086 - Atp1b3 protein_coding retained_intron MGP_CBAJ_T0093215.1 MGP_CBAJ_G0034795.1 mouse_genomes_project 9 103810502 103815617 - Atp1b3 protein_coding processed_transcript MGP_CBAJ_T0094569.1 MGP_CBAJ_G0035031.1 mouse_genomes_project 9 123748712 123861427 + MGP_CBAJ_P0094569 Clasp2 protein_coding protein_coding MGP_CBAJ_T0094570.1 MGP_CBAJ_G0035031.1 mouse_genomes_project 9 123748712 123861427 + MGP_CBAJ_P0094570 Clasp2 protein_coding protein_coding MGP_CBAJ_T0094571.1 MGP_CBAJ_G0035031.1 mouse_genomes_project 9 123748726 123859829 + MGP_CBAJ_P0094571 Clasp2 protein_coding protein_coding MGP_CBAJ_T0092812.1 MGP_CBAJ_G0034710.1 mouse_genomes_project 9 83393726 83406956 + MGP_CBAJ_P0092812 Gcm1 protein_coding protein_coding MGP_CBAJ_T0090576.1 MGP_CBAJ_G0033964.1 mouse_genomes_project 9 1082646 1104550 + MGP_CBAJ_P0090576 Kbtbd3 protein_coding protein_coding MGP_CBAJ_T0094902.1 MGP_CBAJ_G0035146.1 mouse_genomes_project 9 135944583 135948553 - MGP_CBAJ_P0094902 unknown_likely_coding unknown_likely_coding MGP_CBAJ_T0094416.1 MGP_CBAJ_G0035003.1 mouse_genomes_project 9 120164324 120193809 - MGP_CBAJ_P0094416 Nbeal2 protein_coding protein_coding MGP_CBAJ_T0094417.1 MGP_CBAJ_G0035003.1 mouse_genomes_project 9 120164324 120193809 - MGP_CBAJ_P0094417 Nbeal2 protein_coding protein_coding MGP_CBAJ_T0094418.1 MGP_CBAJ_G0035003.1 mouse_genomes_project 9 120164407 120193790 - MGP_CBAJ_P0094418 Nbeal2 protein_coding protein_coding MGP_CBAJ_T0094419.1 MGP_CBAJ_G0035003.1 mouse_genomes_project 9 120164578 120171679 - MGP_CBAJ_P0094419 Nbeal2 protein_coding protein_coding MGP_CBAJ_T0094420.1 MGP_CBAJ_G0035003.1 mouse_genomes_project 9 120164578 120178249 - MGP_CBAJ_P0094420 Nbeal2 protein_coding protein_coding MGP_CBAJ_T0094421.1 MGP_CBAJ_G0035003.1 mouse_genomes_project 9 120167771 120168414 - Nbeal2 protein_coding retained_intron MGP_CBAJ_T0094422.1 MGP_CBAJ_G0035003.1 mouse_genomes_project 9 120168443 120169204 - Nbeal2 protein_coding retained_intron MGP_CBAJ_T0094423.1 MGP_CBAJ_G0035003.1 mouse_genomes_project 9 120169105 120174077 - MGP_CBAJ_P0094423 Nbeal2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094424.1 MGP_CBAJ_G0035003.1 mouse_genomes_project 9 120170599 120171508 - Nbeal2 protein_coding retained_intron MGP_CBAJ_T0094425.1 MGP_CBAJ_G0035003.1 mouse_genomes_project 9 120174251 120174719 - Nbeal2 protein_coding retained_intron MGP_CBAJ_T0094426.1 MGP_CBAJ_G0035003.1 mouse_genomes_project 9 120177949 120185001 - MGP_CBAJ_P0094426 Nbeal2 protein_coding protein_coding MGP_CBAJ_T0091334.1 MGP_CBAJ_G0034259.1 mouse_genomes_project 9 39088291 39089413 + MGP_CBAJ_P0091334 Olfr911-ps1 protein_coding protein_coding MGP_CBAJ_T0100860.1 MGP_CBAJ_G0039115.1 mouse_genomes_project 9 24065728 24065862 + Gm23893 snoRNA snoRNA MGP_CBAJ_T0091364.1 MGP_CBAJ_G0034283.1 mouse_genomes_project 9 39791625 39812306 + MGP_CBAJ_P0091364 Olfr943 protein_coding protein_coding MGP_CBAJ_T0092006.1 MGP_CBAJ_G0034512.1 mouse_genomes_project 9 59841045 59858461 + MGP_CBAJ_P0092006 Sin3a protein_coding protein_coding MGP_CBAJ_T0092007.1 MGP_CBAJ_G0034512.1 mouse_genomes_project 9 59844341 59906052 + MGP_CBAJ_P0092007 Sin3a protein_coding protein_coding MGP_CBAJ_T0092008.1 MGP_CBAJ_G0034512.1 mouse_genomes_project 9 59845379 59906050 + MGP_CBAJ_P0092008 Sin3a protein_coding protein_coding MGP_CBAJ_T0092009.1 MGP_CBAJ_G0034512.1 mouse_genomes_project 9 59845402 59906052 + MGP_CBAJ_P0092009 Sin3a protein_coding protein_coding MGP_CBAJ_T0092010.1 MGP_CBAJ_G0034512.1 mouse_genomes_project 9 59845631 59867246 + MGP_CBAJ_P0092010 Sin3a protein_coding protein_coding MGP_CBAJ_T0092011.1 MGP_CBAJ_G0034512.1 mouse_genomes_project 9 59850161 59906052 + MGP_CBAJ_P0092011 Sin3a protein_coding protein_coding MGP_CBAJ_T0092012.1 MGP_CBAJ_G0034512.1 mouse_genomes_project 9 59855545 59906052 + MGP_CBAJ_P0092012 Sin3a protein_coding protein_coding MGP_CBAJ_T0092013.1 MGP_CBAJ_G0034512.1 mouse_genomes_project 9 59867090 59869723 + Sin3a protein_coding retained_intron MGP_CBAJ_T0092014.1 MGP_CBAJ_G0034512.1 mouse_genomes_project 9 59891160 59902874 + Sin3a protein_coding retained_intron MGP_CBAJ_T0015798.1 MGP_CBAJ_G0013910.1 mouse_genomes_project 9 30924044 30924422 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0092829.1 MGP_CBAJ_G0034715.1 mouse_genomes_project 9 83619263 83643364 + MGP_CBAJ_P0092829 protein_coding protein_coding MGP_CBAJ_T0002317.1 MGP_CBAJ_G0002230.1 mouse_genomes_project 9 34533468 34534379 + TEC TEC MGP_CBAJ_T0009148.1 MGP_CBAJ_G0007343.1 mouse_genomes_project 9 63962755 63992186 + 1700036A12Rik lincRNA lincRNA MGP_CBAJ_T0009149.1 MGP_CBAJ_G0007343.1 mouse_genomes_project 9 63991512 63991866 + 1700036A12Rik lincRNA lincRNA MGP_CBAJ_T0010965.1 MGP_CBAJ_G0009103.1 mouse_genomes_project 9 116060256 116060344 - Gm22238 miRNA miRNA MGP_CBAJ_T0091196.1 MGP_CBAJ_G0034192.1 mouse_genomes_project 9 35644550 35653090 + Pus3 protein_coding retained_intron MGP_CBAJ_T0091197.1 MGP_CBAJ_G0034192.1 mouse_genomes_project 9 35645415 35653353 + MGP_CBAJ_P0091197 Pus3 protein_coding protein_coding MGP_CBAJ_T0091198.1 MGP_CBAJ_G0034192.1 mouse_genomes_project 9 35645421 35652791 + MGP_CBAJ_P0091198 Pus3 protein_coding protein_coding MGP_CBAJ_T0002330.1 MGP_CBAJ_G0002243.1 mouse_genomes_project 9 76616860 76618511 - TEC TEC MGP_CBAJ_T0093083.1 MGP_CBAJ_G0034771.1 mouse_genomes_project 9 96763157 96777092 + MGP_CBAJ_P0093083 Ctsh protein_coding protein_coding MGP_CBAJ_T0093084.1 MGP_CBAJ_G0034771.1 mouse_genomes_project 9 96763272 96789592 + MGP_CBAJ_P0093084 Ctsh protein_coding protein_coding MGP_CBAJ_T0093085.1 MGP_CBAJ_G0034771.1 mouse_genomes_project 9 96763511 96789590 + Ctsh protein_coding retained_intron MGP_CBAJ_T0093086.1 MGP_CBAJ_G0034771.1 mouse_genomes_project 9 96763526 96764348 + Ctsh protein_coding retained_intron MGP_CBAJ_T0093087.1 MGP_CBAJ_G0034771.1 mouse_genomes_project 9 96763542 96775909 + MGP_CBAJ_P0093087 Ctsh protein_coding protein_coding MGP_CBAJ_T0093088.1 MGP_CBAJ_G0034771.1 mouse_genomes_project 9 96763543 96789590 + MGP_CBAJ_P0093088 Ctsh protein_coding nonsense_mediated_decay MGP_CBAJ_T0093089.1 MGP_CBAJ_G0034771.1 mouse_genomes_project 9 96763559 96779014 + Ctsh protein_coding retained_intron MGP_CBAJ_T0093090.1 MGP_CBAJ_G0034771.1 mouse_genomes_project 9 96763564 96789244 + MGP_CBAJ_P0093090 Ctsh protein_coding protein_coding MGP_CBAJ_T0093091.1 MGP_CBAJ_G0034771.1 mouse_genomes_project 9 96768731 96770202 + Ctsh protein_coding retained_intron MGP_CBAJ_T0093092.1 MGP_CBAJ_G0034771.1 mouse_genomes_project 9 96774191 96785457 + Ctsh protein_coding retained_intron MGP_CBAJ_T0093093.1 MGP_CBAJ_G0034771.1 mouse_genomes_project 9 96785267 96789252 + Ctsh protein_coding retained_intron MGP_CBAJ_T0015827.1 MGP_CBAJ_G0013939.1 mouse_genomes_project 9 76558282 76558381 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0005411.1 MGP_CBAJ_G0004568.1 mouse_genomes_project 9 102974061 103007458 - Gm16126 antisense antisense MGP_CBAJ_T0090983.1 MGP_CBAJ_G0034125.1 mouse_genomes_project 9 20791940 20809827 - MGP_CBAJ_P0090983 Rgl3 protein_coding protein_coding MGP_CBAJ_T0015883.1 MGP_CBAJ_G0013995.1 mouse_genomes_project 9 99642373 99642839 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0093671.1 MGP_CBAJ_G0034889.1 mouse_genomes_project 9 115243414 115244852 + MGP_CBAJ_P0093671 Iqcf5 protein_coding protein_coding MGP_CBAJ_T0094106.1 MGP_CBAJ_G0034954.1 mouse_genomes_project 9 117486609 117504561 + MGP_CBAJ_P0094106 Qrich1 protein_coding protein_coding MGP_CBAJ_T0094107.1 MGP_CBAJ_G0034954.1 mouse_genomes_project 9 117486890 117499533 + MGP_CBAJ_P0094107 Qrich1 protein_coding protein_coding MGP_CBAJ_T0094108.1 MGP_CBAJ_G0034954.1 mouse_genomes_project 9 117486906 117488620 + Qrich1 protein_coding processed_transcript MGP_CBAJ_T0094109.1 MGP_CBAJ_G0034954.1 mouse_genomes_project 9 117486906 117522609 + MGP_CBAJ_P0094109 Qrich1 protein_coding protein_coding MGP_CBAJ_T0094110.1 MGP_CBAJ_G0034954.1 mouse_genomes_project 9 117486913 117539518 + MGP_CBAJ_P0094110 Qrich1 protein_coding protein_coding MGP_CBAJ_T0094111.1 MGP_CBAJ_G0034954.1 mouse_genomes_project 9 117486917 117539697 + MGP_CBAJ_P0094111 Qrich1 protein_coding protein_coding MGP_CBAJ_T0094112.1 MGP_CBAJ_G0034954.1 mouse_genomes_project 9 117486955 117499519 + MGP_CBAJ_P0094112 Qrich1 protein_coding protein_coding MGP_CBAJ_T0094113.1 MGP_CBAJ_G0034954.1 mouse_genomes_project 9 117486958 117499559 + MGP_CBAJ_P0094113 Qrich1 protein_coding protein_coding MGP_CBAJ_T0094114.1 MGP_CBAJ_G0034954.1 mouse_genomes_project 9 117486959 117522378 + MGP_CBAJ_P0094114 Qrich1 protein_coding protein_coding MGP_CBAJ_T0094115.1 MGP_CBAJ_G0034954.1 mouse_genomes_project 9 117487430 117501297 + Qrich1 protein_coding retained_intron MGP_CBAJ_T0094116.1 MGP_CBAJ_G0034954.1 mouse_genomes_project 9 117487454 117499555 + MGP_CBAJ_P0094116 Qrich1 protein_coding protein_coding MGP_CBAJ_T0094117.1 MGP_CBAJ_G0034954.1 mouse_genomes_project 9 117499071 117504311 + MGP_CBAJ_P0094117 Qrich1 protein_coding protein_coding MGP_CBAJ_T0094118.1 MGP_CBAJ_G0034954.1 mouse_genomes_project 9 117533380 117539094 + Qrich1 protein_coding retained_intron MGP_CBAJ_T0094119.1 MGP_CBAJ_G0034954.1 mouse_genomes_project 9 117533718 117538925 + Qrich1 protein_coding retained_intron MGP_CBAJ_T0094525.1 MGP_CBAJ_G0035025.1 mouse_genomes_project 9 121105079 121160174 + MGP_CBAJ_P0094525 Dclk3 protein_coding protein_coding MGP_CBAJ_T0002400.1 MGP_CBAJ_G0002312.1 mouse_genomes_project 9 110151727 110152775 + TEC TEC MGP_CBAJ_T0094255.1 MGP_CBAJ_G0034974.1 mouse_genomes_project 9 118054191 118055993 - MGP_CBAJ_P0094255 protein_coding protein_coding MGP_CBAJ_T0094257.1 MGP_CBAJ_G0034974.1 mouse_genomes_project 9 118054196 118055510 - MGP_CBAJ_P0094257 protein_coding protein_coding MGP_CBAJ_T0092860.1 MGP_CBAJ_G0034728.1 mouse_genomes_project 9 85230270 85369278 - MGP_CBAJ_P0092860 protein_coding protein_coding MGP_CBAJ_T0092861.1 MGP_CBAJ_G0034728.1 mouse_genomes_project 9 85230270 85246027 - MGP_CBAJ_P0092861 protein_coding protein_coding MGP_CBAJ_T0092862.1 MGP_CBAJ_G0034728.1 mouse_genomes_project 9 85233036 85369480 - MGP_CBAJ_P0092862 protein_coding protein_coding MGP_CBAJ_T0092863.1 MGP_CBAJ_G0034728.1 mouse_genomes_project 9 85337139 85369480 - protein_coding retained_intron MGP_CBAJ_T0092864.1 MGP_CBAJ_G0034728.1 mouse_genomes_project 9 85361102 85369591 - protein_coding retained_intron MGP_CBAJ_T0092865.1 MGP_CBAJ_G0034728.1 mouse_genomes_project 9 85363474 85369254 - protein_coding retained_intron MGP_CBAJ_T0094812.1 MGP_CBAJ_G0035111.1 mouse_genomes_project 9 133303304 133431075 - MGP_CBAJ_P0094812 Ano10 protein_coding unknown_likely_coding MGP_CBAJ_T0092281.1 MGP_CBAJ_G0034585.1 mouse_genomes_project 9 67178573 67217573 + MGP_CBAJ_P0092281 Aagab protein_coding protein_coding MGP_CBAJ_T0092325.1 MGP_CBAJ_G0034596.1 mouse_genomes_project 9 68081037 68425179 + MGP_CBAJ_P0092325 Megf11 protein_coding protein_coding MGP_CBAJ_T0092326.1 MGP_CBAJ_G0034596.1 mouse_genomes_project 9 68081037 68433409 + MGP_CBAJ_P0092326 Megf11 protein_coding protein_coding MGP_CBAJ_T0092327.1 MGP_CBAJ_G0034596.1 mouse_genomes_project 9 68081037 68431494 + MGP_CBAJ_P0092327 Megf11 protein_coding protein_coding MGP_CBAJ_T0092328.1 MGP_CBAJ_G0034596.1 mouse_genomes_project 9 68081094 68369088 + Megf11 protein_coding retained_intron MGP_CBAJ_T0092329.1 MGP_CBAJ_G0034596.1 mouse_genomes_project 9 68196669 68432012 + MGP_CBAJ_P0092329 Megf11 protein_coding unknown_likely_coding MGP_CBAJ_T0092330.1 MGP_CBAJ_G0034596.1 mouse_genomes_project 9 68202959 68210696 + Megf11 protein_coding processed_transcript MGP_CBAJ_T0092331.1 MGP_CBAJ_G0034596.1 mouse_genomes_project 9 68203224 68411957 + Megf11 protein_coding retained_intron MGP_CBAJ_T0092332.1 MGP_CBAJ_G0034596.1 mouse_genomes_project 9 68251125 68353871 + Megf11 protein_coding processed_transcript MGP_CBAJ_T0092333.1 MGP_CBAJ_G0034596.1 mouse_genomes_project 9 68379455 68416609 + MGP_CBAJ_P0092333 Megf11 protein_coding protein_coding MGP_CBAJ_T0092334.1 MGP_CBAJ_G0034596.1 mouse_genomes_project 9 68417984 68430137 + Megf11 protein_coding processed_transcript MGP_CBAJ_T0093889.1 MGP_CBAJ_G0034921.1 mouse_genomes_project 9 116628881 116742859 - MGP_CBAJ_P0093889 Rbm6 protein_coding protein_coding MGP_CBAJ_T0093890.1 MGP_CBAJ_G0034921.1 mouse_genomes_project 9 116628885 116742851 - MGP_CBAJ_P0093890 Rbm6 protein_coding protein_coding MGP_CBAJ_T0093891.1 MGP_CBAJ_G0034921.1 mouse_genomes_project 9 116628889 116742793 - MGP_CBAJ_P0093891 Rbm6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093892.1 MGP_CBAJ_G0034921.1 mouse_genomes_project 9 116633269 116635530 - Rbm6 protein_coding retained_intron MGP_CBAJ_T0093893.1 MGP_CBAJ_G0034921.1 mouse_genomes_project 9 116642853 116646215 - Rbm6 protein_coding retained_intron MGP_CBAJ_T0093894.1 MGP_CBAJ_G0034921.1 mouse_genomes_project 9 116643079 116646761 - MGP_CBAJ_P0093894 Rbm6 protein_coding protein_coding MGP_CBAJ_T0093895.1 MGP_CBAJ_G0034921.1 mouse_genomes_project 9 116646769 116742763 - MGP_CBAJ_P0093895 Rbm6 protein_coding protein_coding MGP_CBAJ_T0093896.1 MGP_CBAJ_G0034921.1 mouse_genomes_project 9 116658718 116742765 - Rbm6 protein_coding processed_transcript MGP_CBAJ_T0093897.1 MGP_CBAJ_G0034921.1 mouse_genomes_project 9 116670119 116707955 - Rbm6 protein_coding processed_transcript MGP_CBAJ_T0093898.1 MGP_CBAJ_G0034921.1 mouse_genomes_project 9 116692296 116742774 - Rbm6 protein_coding retained_intron MGP_CBAJ_T0093899.1 MGP_CBAJ_G0034921.1 mouse_genomes_project 9 116707842 116711994 - Rbm6 protein_coding retained_intron MGP_CBAJ_T0093900.1 MGP_CBAJ_G0034921.1 mouse_genomes_project 9 116713836 116742805 - MGP_CBAJ_P0093900 Rbm6 protein_coding protein_coding MGP_CBAJ_T0093901.1 MGP_CBAJ_G0034921.1 mouse_genomes_project 9 116713887 116742451 - MGP_CBAJ_P0093901 Rbm6 protein_coding protein_coding MGP_CBAJ_T0093902.1 MGP_CBAJ_G0034921.1 mouse_genomes_project 9 116713925 116742801 - Rbm6 protein_coding processed_transcript MGP_CBAJ_T0093903.1 MGP_CBAJ_G0034921.1 mouse_genomes_project 9 116722360 116742752 - Rbm6 protein_coding retained_intron MGP_CBAJ_T0093904.1 MGP_CBAJ_G0034921.1 mouse_genomes_project 9 116738879 116743267 - Rbm6 protein_coding retained_intron MGP_CBAJ_T0092042.1 MGP_CBAJ_G0034516.1 mouse_genomes_project 9 60044065 60057373 + MGP_CBAJ_P0092042 Trcg1 protein_coding protein_coding MGP_CBAJ_T0093479.1 MGP_CBAJ_G0034856.1 mouse_genomes_project 9 112389985 112406996 - MGP_CBAJ_P0093479 Uba5 protein_coding protein_coding MGP_CBAJ_T0093480.1 MGP_CBAJ_G0034856.1 mouse_genomes_project 9 112391036 112401033 - MGP_CBAJ_P0093480 Uba5 protein_coding protein_coding MGP_CBAJ_T0093481.1 MGP_CBAJ_G0034856.1 mouse_genomes_project 9 112392970 112406925 - MGP_CBAJ_P0093481 Uba5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093482.1 MGP_CBAJ_G0034856.1 mouse_genomes_project 9 112401615 112404324 - Uba5 protein_coding retained_intron MGP_CBAJ_T0094277.1 MGP_CBAJ_G0034979.1 mouse_genomes_project 9 118164013 118199338 - MGP_CBAJ_P0094277 Fbxw21 protein_coding protein_coding MGP_CBAJ_T0094278.1 MGP_CBAJ_G0034979.1 mouse_genomes_project 9 118181440 118199337 - MGP_CBAJ_P0094278 Fbxw21 protein_coding protein_coding MGP_CBAJ_T0093450.1 MGP_CBAJ_G0034850.1 mouse_genomes_project 9 111592174 111639772 + MGP_CBAJ_P0093450 Topbp1 protein_coding protein_coding MGP_CBAJ_T0093451.1 MGP_CBAJ_G0034850.1 mouse_genomes_project 9 111592190 111592958 + Topbp1 protein_coding retained_intron MGP_CBAJ_T0093452.1 MGP_CBAJ_G0034850.1 mouse_genomes_project 9 111592462 111598506 + MGP_CBAJ_P0093452 Topbp1 protein_coding protein_coding MGP_CBAJ_T0093453.1 MGP_CBAJ_G0034850.1 mouse_genomes_project 9 111617509 111626625 + Topbp1 protein_coding retained_intron MGP_CBAJ_T0093454.1 MGP_CBAJ_G0034850.1 mouse_genomes_project 9 111617535 111619338 + Topbp1 protein_coding retained_intron MGP_CBAJ_T0093455.1 MGP_CBAJ_G0034850.1 mouse_genomes_project 9 111622415 111631392 + MGP_CBAJ_P0093455 Topbp1 protein_coding protein_coding MGP_CBAJ_T0093456.1 MGP_CBAJ_G0034850.1 mouse_genomes_project 9 111632984 111636077 + MGP_CBAJ_P0093456 Topbp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093457.1 MGP_CBAJ_G0034850.1 mouse_genomes_project 9 111633286 111634036 + Topbp1 protein_coding retained_intron MGP_CBAJ_T0093458.1 MGP_CBAJ_G0034850.1 mouse_genomes_project 9 111634956 111636438 + Topbp1 protein_coding retained_intron MGP_CBAJ_T0093459.1 MGP_CBAJ_G0034850.1 mouse_genomes_project 9 111635577 111639245 + Topbp1 protein_coding retained_intron MGP_CBAJ_T0092260.1 MGP_CBAJ_G0034578.1 mouse_genomes_project 9 66335873 66348761 + MGP_CBAJ_P0092260 Cln6 protein_coding protein_coding MGP_CBAJ_T0092261.1 MGP_CBAJ_G0034578.1 mouse_genomes_project 9 66335880 66342773 + MGP_CBAJ_P0092261 Cln6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092262.1 MGP_CBAJ_G0034578.1 mouse_genomes_project 9 66342769 66347466 + MGP_CBAJ_P0092262 Cln6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092263.1 MGP_CBAJ_G0034578.1 mouse_genomes_project 9 66343787 66347917 + MGP_CBAJ_P0092263 Cln6 protein_coding protein_coding MGP_CBAJ_T0094169.1 MGP_CBAJ_G0034963.1 mouse_genomes_project 9 117818375 117832621 + MGP_CBAJ_P0094169 Ip6k2 protein_coding protein_coding MGP_CBAJ_T0094170.1 MGP_CBAJ_G0034963.1 mouse_genomes_project 9 117818375 117840890 + MGP_CBAJ_P0094170 Ip6k2 protein_coding protein_coding MGP_CBAJ_T0094171.1 MGP_CBAJ_G0034963.1 mouse_genomes_project 9 117818401 117833466 + Ip6k2 protein_coding retained_intron MGP_CBAJ_T0094172.1 MGP_CBAJ_G0034963.1 mouse_genomes_project 9 117818444 117831609 + Ip6k2 protein_coding retained_intron MGP_CBAJ_T0094173.1 MGP_CBAJ_G0034963.1 mouse_genomes_project 9 117818444 117831976 + MGP_CBAJ_P0094173 Ip6k2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094174.1 MGP_CBAJ_G0034963.1 mouse_genomes_project 9 117818444 117832323 + MGP_CBAJ_P0094174 Ip6k2 protein_coding protein_coding MGP_CBAJ_T0094175.1 MGP_CBAJ_G0034963.1 mouse_genomes_project 9 117830625 117840895 + MGP_CBAJ_P0094175 Ip6k2 protein_coding protein_coding MGP_CBAJ_T0094176.1 MGP_CBAJ_G0034963.1 mouse_genomes_project 9 117830625 117833901 + MGP_CBAJ_P0094176 Ip6k2 protein_coding protein_coding MGP_CBAJ_T0094177.1 MGP_CBAJ_G0034963.1 mouse_genomes_project 9 117830695 117832073 + MGP_CBAJ_P0094177 Ip6k2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094178.1 MGP_CBAJ_G0034963.1 mouse_genomes_project 9 117830762 117832626 + MGP_CBAJ_P0094178 Ip6k2 protein_coding protein_coding MGP_CBAJ_T0094179.1 MGP_CBAJ_G0034963.1 mouse_genomes_project 9 117830983 117832324 + MGP_CBAJ_P0094179 Ip6k2 protein_coding protein_coding MGP_CBAJ_T0094180.1 MGP_CBAJ_G0034963.1 mouse_genomes_project 9 117832818 117834004 + Ip6k2 protein_coding retained_intron MGP_CBAJ_T0092344.1 MGP_CBAJ_G0034599.1 mouse_genomes_project 9 68686508 68716956 - MGP_CBAJ_P0092344 Slc24a1 protein_coding protein_coding MGP_CBAJ_T0092450.1 MGP_CBAJ_G0034632.1 mouse_genomes_project 9 70737304 70798534 + MGP_CBAJ_P0092450 Car12 protein_coding protein_coding MGP_CBAJ_T0092451.1 MGP_CBAJ_G0034632.1 mouse_genomes_project 9 70737345 70786163 + Car12 protein_coding retained_intron MGP_CBAJ_T0092452.1 MGP_CBAJ_G0034632.1 mouse_genomes_project 9 70737346 70779567 + Car12 protein_coding retained_intron MGP_CBAJ_T0092453.1 MGP_CBAJ_G0034632.1 mouse_genomes_project 9 70737348 70798531 + MGP_CBAJ_P0092453 Car12 protein_coding protein_coding MGP_CBAJ_T0092454.1 MGP_CBAJ_G0034632.1 mouse_genomes_project 9 70779398 70796006 + MGP_CBAJ_P0092454 Car12 protein_coding protein_coding MGP_CBAJ_T0091933.1 MGP_CBAJ_G0034488.1 mouse_genomes_project 9 57459579 57465165 + Psma4 protein_coding retained_intron MGP_CBAJ_T0091934.1 MGP_CBAJ_G0034488.1 mouse_genomes_project 9 57459586 57463814 + Psma4 protein_coding retained_intron MGP_CBAJ_T0091935.1 MGP_CBAJ_G0034488.1 mouse_genomes_project 9 57459596 57461588 + Psma4 protein_coding processed_transcript MGP_CBAJ_T0091936.1 MGP_CBAJ_G0034488.1 mouse_genomes_project 9 57459596 57470412 + MGP_CBAJ_P0091936 Psma4 protein_coding protein_coding MGP_CBAJ_T0091937.1 MGP_CBAJ_G0034488.1 mouse_genomes_project 9 57459602 57473396 + MGP_CBAJ_P0091937 Psma4 protein_coding unknown_likely_coding MGP_CBAJ_T0091938.1 MGP_CBAJ_G0034488.1 mouse_genomes_project 9 57459671 57462208 + Psma4 protein_coding retained_intron MGP_CBAJ_T0091939.1 MGP_CBAJ_G0034488.1 mouse_genomes_project 9 57459885 57465078 + MGP_CBAJ_P0091939 Psma4 protein_coding protein_coding MGP_CBAJ_T0093639.1 MGP_CBAJ_G0034883.1 mouse_genomes_project 9 115173993 115187979 + MGP_CBAJ_P0093639 Pcbp4 protein_coding protein_coding MGP_CBAJ_T0093640.1 MGP_CBAJ_G0034883.1 mouse_genomes_project 9 115182568 115183324 + Pcbp4 protein_coding processed_transcript MGP_CBAJ_T0093641.1 MGP_CBAJ_G0034883.1 mouse_genomes_project 9 115182981 115187963 + MGP_CBAJ_P0093641 Pcbp4 protein_coding protein_coding MGP_CBAJ_T0093642.1 MGP_CBAJ_G0034883.1 mouse_genomes_project 9 115183166 115188809 + MGP_CBAJ_P0093642 Pcbp4 protein_coding protein_coding MGP_CBAJ_T0093643.1 MGP_CBAJ_G0034883.1 mouse_genomes_project 9 115186889 115192972 + MGP_CBAJ_P0093643 Pcbp4 protein_coding protein_coding MGP_CBAJ_T0093644.1 MGP_CBAJ_G0034883.1 mouse_genomes_project 9 115187279 115187753 + Pcbp4 protein_coding retained_intron MGP_CBAJ_T0093645.1 MGP_CBAJ_G0034883.1 mouse_genomes_project 9 115187544 115188222 + MGP_CBAJ_P0093645 Pcbp4 protein_coding protein_coding MGP_CBAJ_T0093646.1 MGP_CBAJ_G0034883.1 mouse_genomes_project 9 115187940 115192509 + MGP_CBAJ_P0093646 Pcbp4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093647.1 MGP_CBAJ_G0034883.1 mouse_genomes_project 9 115188157 115189046 + Pcbp4 protein_coding retained_intron MGP_CBAJ_T0093648.1 MGP_CBAJ_G0034883.1 mouse_genomes_project 9 115188182 115189829 + MGP_CBAJ_P0093648 Pcbp4 protein_coding protein_coding MGP_CBAJ_T0093649.1 MGP_CBAJ_G0034883.1 mouse_genomes_project 9 115188627 115189296 + Pcbp4 protein_coding processed_transcript MGP_CBAJ_T0093650.1 MGP_CBAJ_G0034883.1 mouse_genomes_project 9 115188754 115192655 + MGP_CBAJ_P0093650 Pcbp4 protein_coding protein_coding MGP_CBAJ_T0093651.1 MGP_CBAJ_G0034883.1 mouse_genomes_project 9 115188937 115189555 + Pcbp4 protein_coding retained_intron MGP_CBAJ_T0092910.1 MGP_CBAJ_G0034738.1 mouse_genomes_project 9 88844489 88971580 - MGP_CBAJ_P0092910 Phip protein_coding protein_coding MGP_CBAJ_T0092911.1 MGP_CBAJ_G0034738.1 mouse_genomes_project 9 88849571 88878715 - Phip protein_coding retained_intron MGP_CBAJ_T0092912.1 MGP_CBAJ_G0034738.1 mouse_genomes_project 9 88868812 88872113 - Phip protein_coding retained_intron MGP_CBAJ_T0092913.1 MGP_CBAJ_G0034738.1 mouse_genomes_project 9 88873958 88971472 - Phip protein_coding retained_intron MGP_CBAJ_T0092914.1 MGP_CBAJ_G0034738.1 mouse_genomes_project 9 88876961 88878435 - Phip protein_coding retained_intron MGP_CBAJ_T0092915.1 MGP_CBAJ_G0034738.1 mouse_genomes_project 9 88879495 88883447 - Phip protein_coding retained_intron MGP_CBAJ_T0092916.1 MGP_CBAJ_G0034738.1 mouse_genomes_project 9 88883002 88925426 - MGP_CBAJ_P0092916 Phip protein_coding nonsense_mediated_decay MGP_CBAJ_T0092917.1 MGP_CBAJ_G0034738.1 mouse_genomes_project 9 88885763 88891324 - Phip protein_coding retained_intron MGP_CBAJ_T0092918.1 MGP_CBAJ_G0034738.1 mouse_genomes_project 9 88895449 88971490 - Phip protein_coding retained_intron MGP_CBAJ_T0092919.1 MGP_CBAJ_G0034738.1 mouse_genomes_project 9 88896059 88919973 - MGP_CBAJ_P0092919 Phip protein_coding nonsense_mediated_decay MGP_CBAJ_T0092920.1 MGP_CBAJ_G0034738.1 mouse_genomes_project 9 88898178 88899993 - Phip protein_coding retained_intron MGP_CBAJ_T0092921.1 MGP_CBAJ_G0034738.1 mouse_genomes_project 9 88918704 88921005 - Phip protein_coding retained_intron MGP_CBAJ_T0092922.1 MGP_CBAJ_G0034738.1 mouse_genomes_project 9 88920011 88970332 - MGP_CBAJ_P0092922 Phip protein_coding protein_coding MGP_CBAJ_T0092923.1 MGP_CBAJ_G0034738.1 mouse_genomes_project 9 88922821 88925883 - Phip protein_coding retained_intron MGP_CBAJ_T0092924.1 MGP_CBAJ_G0034738.1 mouse_genomes_project 9 88941113 88971480 - Phip protein_coding retained_intron MGP_CBAJ_T0092925.1 MGP_CBAJ_G0034738.1 mouse_genomes_project 9 88952399 88971483 - Phip protein_coding retained_intron MGP_CBAJ_T0090817.1 MGP_CBAJ_G0034067.1 mouse_genomes_project 9 18775729 18803124 + MGP_CBAJ_P0090817 Olfr872 protein_coding protein_coding MGP_CBAJ_T0005365.1 MGP_CBAJ_G0004536.1 mouse_genomes_project 9 56018570 56032595 + Gm16124 antisense antisense MGP_CBAJ_T0005366.1 MGP_CBAJ_G0004537.1 mouse_genomes_project 9 56677628 56710404 - Gldnos antisense antisense MGP_CBAJ_T0093346.1 MGP_CBAJ_G0034829.1 mouse_genomes_project 9 108475275 108542564 - MGP_CBAJ_P0093346 Nck1 protein_coding protein_coding MGP_CBAJ_T0093347.1 MGP_CBAJ_G0034829.1 mouse_genomes_project 9 108477983 108491491 - MGP_CBAJ_P0093347 Nck1 protein_coding protein_coding MGP_CBAJ_T0093348.1 MGP_CBAJ_G0034829.1 mouse_genomes_project 9 108480560 108542552 - MGP_CBAJ_P0093348 Nck1 protein_coding protein_coding MGP_CBAJ_T0093349.1 MGP_CBAJ_G0034829.1 mouse_genomes_project 9 108480783 108542161 - MGP_CBAJ_P0093349 Nck1 protein_coding protein_coding MGP_CBAJ_T0009235.1 MGP_CBAJ_G0007411.1 mouse_genomes_project 9 121967024 121967688 + 2310075C17Rik lincRNA lincRNA MGP_CBAJ_T0091303.1 MGP_CBAJ_G0034229.1 mouse_genomes_project 9 38181258 38182530 + MGP_CBAJ_P0091303 Olfr874 protein_coding protein_coding MGP_CBAJ_T0098117.1 MGP_CBAJ_G0036390.1 mouse_genomes_project 9 67662887 67662982 + Gm25606 rRNA rRNA MGP_CBAJ_T0091309.1 MGP_CBAJ_G0034235.1 mouse_genomes_project 9 38474869 38475817 + MGP_CBAJ_P0091309 Olfr881 protein_coding protein_coding MGP_CBAJ_T0093118.1 MGP_CBAJ_G0034776.1 mouse_genomes_project 9 98208793 98228854 + MGP_CBAJ_P0093118 Zic4 protein_coding protein_coding MGP_CBAJ_T0093119.1 MGP_CBAJ_G0034776.1 mouse_genomes_project 9 98218350 98219117 + Zic4 protein_coding processed_transcript MGP_CBAJ_T0093120.1 MGP_CBAJ_G0034776.1 mouse_genomes_project 9 98218795 98229196 + MGP_CBAJ_P0093120 Zic4 protein_coding protein_coding MGP_CBAJ_T0093121.1 MGP_CBAJ_G0034776.1 mouse_genomes_project 9 98218877 98230922 + Zic4 protein_coding retained_intron MGP_CBAJ_T0093122.1 MGP_CBAJ_G0034776.1 mouse_genomes_project 9 98218953 98244265 + MGP_CBAJ_P0093122 Zic4 protein_coding protein_coding MGP_CBAJ_T0093123.1 MGP_CBAJ_G0034776.1 mouse_genomes_project 9 98219473 98229479 + Zic4 protein_coding retained_intron MGP_CBAJ_T0093124.1 MGP_CBAJ_G0034776.1 mouse_genomes_project 9 98220979 98229128 + MGP_CBAJ_P0093124 Zic4 protein_coding protein_coding MGP_CBAJ_T0093125.1 MGP_CBAJ_G0034776.1 mouse_genomes_project 9 98221188 98243430 + MGP_CBAJ_P0093125 Zic4 protein_coding protein_coding MGP_CBAJ_T0093126.1 MGP_CBAJ_G0034776.1 mouse_genomes_project 9 98221325 98223893 + Zic4 protein_coding retained_intron MGP_CBAJ_T0093127.1 MGP_CBAJ_G0034776.1 mouse_genomes_project 9 98228135 98238027 + Zic4 protein_coding retained_intron MGP_CBAJ_T0093128.1 MGP_CBAJ_G0034776.1 mouse_genomes_project 9 98228580 98247657 + MGP_CBAJ_P0093128 Zic4 protein_coding protein_coding MGP_CBAJ_T0093129.1 MGP_CBAJ_G0034776.1 mouse_genomes_project 9 98236038 98244516 + Zic4 protein_coding processed_transcript MGP_CBAJ_T0092054.1 MGP_CBAJ_G0034524.1 mouse_genomes_project 9 60396194 60423799 + MGP_CBAJ_P0092054 Scamp2 protein_coding protein_coding MGP_CBAJ_T0091393.1 MGP_CBAJ_G0034306.1 mouse_genomes_project 9 40592525 40593449 + MGP_CBAJ_P0091393 Olfr971 protein_coding protein_coding MGP_CBAJ_T0093049.1 MGP_CBAJ_G0034763.1 mouse_genomes_project 9 94948146 94983673 - MGP_CBAJ_P0093049 Syncrip protein_coding protein_coding MGP_CBAJ_T0093050.1 MGP_CBAJ_G0034763.1 mouse_genomes_project 9 94953574 94981906 - MGP_CBAJ_P0093050 Syncrip protein_coding protein_coding MGP_CBAJ_T0093051.1 MGP_CBAJ_G0034763.1 mouse_genomes_project 9 94953776 94983278 - MGP_CBAJ_P0093051 Syncrip protein_coding protein_coding MGP_CBAJ_T0093052.1 MGP_CBAJ_G0034763.1 mouse_genomes_project 9 94953825 94983343 - MGP_CBAJ_P0093052 Syncrip protein_coding protein_coding MGP_CBAJ_T0093053.1 MGP_CBAJ_G0034763.1 mouse_genomes_project 9 94955074 94983296 - MGP_CBAJ_P0093053 Syncrip protein_coding nonsense_mediated_decay MGP_CBAJ_T0093054.1 MGP_CBAJ_G0034763.1 mouse_genomes_project 9 94957256 94981894 - MGP_CBAJ_P0093054 Syncrip protein_coding protein_coding MGP_CBAJ_T0093055.1 MGP_CBAJ_G0034763.1 mouse_genomes_project 9 94957256 94983356 - MGP_CBAJ_P0093055 Syncrip protein_coding protein_coding MGP_CBAJ_T0093056.1 MGP_CBAJ_G0034763.1 mouse_genomes_project 9 94965704 94981885 - Syncrip protein_coding retained_intron MGP_CBAJ_T0093057.1 MGP_CBAJ_G0034763.1 mouse_genomes_project 9 94977972 94982310 - MGP_CBAJ_P0093057 Syncrip protein_coding protein_coding MGP_CBAJ_T0093058.1 MGP_CBAJ_G0034763.1 mouse_genomes_project 9 94979866 94982365 - Syncrip protein_coding retained_intron MGP_CBAJ_T0091321.1 MGP_CBAJ_G0034246.1 mouse_genomes_project 9 38777304 38778246 + MGP_CBAJ_P0091321 Olfr143 protein_coding protein_coding MGP_CBAJ_T0018316.1 MGP_CBAJ_G0015497.1 mouse_genomes_project 9 111732218 111767786 + 5830418P13Rik processed_transcript antisense MGP_CBAJ_T0018317.1 MGP_CBAJ_G0015497.1 mouse_genomes_project 9 111733747 111734888 + 5830418P13Rik processed_transcript retained_intron MGP_CBAJ_T0018318.1 MGP_CBAJ_G0015497.1 mouse_genomes_project 9 111733771 111736401 + 5830418P13Rik processed_transcript antisense MGP_CBAJ_T0015911.1 MGP_CBAJ_G0014023.1 mouse_genomes_project 9 112219743 112220137 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0090887.1 MGP_CBAJ_G0034089.1 mouse_genomes_project 9 19636405 19649074 + MGP_CBAJ_P0090887 Icam1 protein_coding protein_coding MGP_CBAJ_T0091415.1 MGP_CBAJ_G0034322.1 mouse_genomes_project 9 41096273 41151936 - MGP_CBAJ_P0091415 Gramd1b protein_coding protein_coding MGP_CBAJ_T0091416.1 MGP_CBAJ_G0034322.1 mouse_genomes_project 9 41096279 41362843 - MGP_CBAJ_P0091416 Gramd1b protein_coding protein_coding MGP_CBAJ_T0091417.1 MGP_CBAJ_G0034322.1 mouse_genomes_project 9 41096282 41151578 - MGP_CBAJ_P0091417 Gramd1b protein_coding protein_coding MGP_CBAJ_T0091418.1 MGP_CBAJ_G0034322.1 mouse_genomes_project 9 41096285 41278665 - MGP_CBAJ_P0091418 Gramd1b protein_coding protein_coding MGP_CBAJ_T0091419.1 MGP_CBAJ_G0034322.1 mouse_genomes_project 9 41100915 41201907 - MGP_CBAJ_P0091419 Gramd1b protein_coding protein_coding MGP_CBAJ_T0091420.1 MGP_CBAJ_G0034322.1 mouse_genomes_project 9 41100946 41278759 - MGP_CBAJ_P0091420 Gramd1b protein_coding protein_coding MGP_CBAJ_T0091421.1 MGP_CBAJ_G0034322.1 mouse_genomes_project 9 41103097 41110067 - Gramd1b protein_coding retained_intron MGP_CBAJ_T0091422.1 MGP_CBAJ_G0034322.1 mouse_genomes_project 9 41120135 41139199 - Gramd1b protein_coding retained_intron MGP_CBAJ_T0091423.1 MGP_CBAJ_G0034322.1 mouse_genomes_project 9 41120899 41202205 - Gramd1b protein_coding processed_transcript MGP_CBAJ_T0091424.1 MGP_CBAJ_G0034322.1 mouse_genomes_project 9 41120901 41202191 - Gramd1b protein_coding processed_transcript MGP_CBAJ_T0091425.1 MGP_CBAJ_G0034322.1 mouse_genomes_project 9 41139156 41292939 - Gramd1b protein_coding processed_transcript MGP_CBAJ_T0091426.1 MGP_CBAJ_G0034322.1 mouse_genomes_project 9 41139169 41292929 - Gramd1b protein_coding processed_transcript MGP_CBAJ_T0091427.1 MGP_CBAJ_G0034322.1 mouse_genomes_project 9 41139216 41183918 - Gramd1b protein_coding processed_transcript MGP_CBAJ_T0094849.1 MGP_CBAJ_G0035124.1 mouse_genomes_project 9 134334322 134357237 + MGP_CBAJ_P0094849 Exosc7 protein_coding protein_coding MGP_CBAJ_T0094850.1 MGP_CBAJ_G0035124.1 mouse_genomes_project 9 134334365 134340892 + Exosc7 protein_coding retained_intron MGP_CBAJ_T0094851.1 MGP_CBAJ_G0035124.1 mouse_genomes_project 9 134347492 134352036 + Exosc7 protein_coding processed_transcript MGP_CBAJ_T0100869.1 MGP_CBAJ_G0039124.1 mouse_genomes_project 9 41682816 41682902 + Snord14d snoRNA snoRNA MGP_CBAJ_T0002329.1 MGP_CBAJ_G0002242.1 mouse_genomes_project 9 76606867 76609293 - TEC TEC MGP_CBAJ_T0093781.1 MGP_CBAJ_G0034910.1 mouse_genomes_project 9 116408782 116413617 + MGP_CBAJ_P0093781 Hyal2 protein_coding protein_coding MGP_CBAJ_T0093782.1 MGP_CBAJ_G0034910.1 mouse_genomes_project 9 116408782 116411232 + MGP_CBAJ_P0093782 Hyal2 protein_coding protein_coding MGP_CBAJ_T0093783.1 MGP_CBAJ_G0034910.1 mouse_genomes_project 9 116409954 116413614 + MGP_CBAJ_P0093783 Hyal2 protein_coding protein_coding MGP_CBAJ_T0093784.1 MGP_CBAJ_G0034910.1 mouse_genomes_project 9 116409978 116412801 + MGP_CBAJ_P0093784 Hyal2 protein_coding protein_coding MGP_CBAJ_T0093785.1 MGP_CBAJ_G0034910.1 mouse_genomes_project 9 116410232 116411450 + MGP_CBAJ_P0093785 Hyal2 protein_coding protein_coding MGP_CBAJ_T0093786.1 MGP_CBAJ_G0034910.1 mouse_genomes_project 9 116410642 116413610 + MGP_CBAJ_P0093786 Hyal2 protein_coding protein_coding MGP_CBAJ_T0093787.1 MGP_CBAJ_G0034910.1 mouse_genomes_project 9 116412047 116413041 + Hyal2 protein_coding retained_intron MGP_CBAJ_T0010936.1 MGP_CBAJ_G0009074.1 mouse_genomes_project 9 47501474 47501544 - Mir7087 miRNA miRNA MGP_CBAJ_T0094403.1 MGP_CBAJ_G0035001.1 mouse_genomes_project 9 120064765 120158175 + MGP_CBAJ_P0094403 Setd2 protein_coding protein_coding MGP_CBAJ_T0094404.1 MGP_CBAJ_G0035001.1 mouse_genomes_project 9 120083466 120158156 + MGP_CBAJ_P0094404 Setd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094405.1 MGP_CBAJ_G0035001.1 mouse_genomes_project 9 120086786 120103491 + MGP_CBAJ_P0094405 Setd2 protein_coding protein_coding MGP_CBAJ_T0094406.1 MGP_CBAJ_G0035001.1 mouse_genomes_project 9 120100179 120106626 + Setd2 protein_coding retained_intron MGP_CBAJ_T0094407.1 MGP_CBAJ_G0035001.1 mouse_genomes_project 9 120100261 120109402 + Setd2 protein_coding retained_intron MGP_CBAJ_T0094408.1 MGP_CBAJ_G0035001.1 mouse_genomes_project 9 120112210 120158149 + MGP_CBAJ_P0094408 Setd2 protein_coding protein_coding MGP_CBAJ_T0094409.1 MGP_CBAJ_G0035001.1 mouse_genomes_project 9 120112472 120133218 + MGP_CBAJ_P0094409 Setd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094410.1 MGP_CBAJ_G0035001.1 mouse_genomes_project 9 120140951 120157690 + MGP_CBAJ_P0094410 Setd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0094411.1 MGP_CBAJ_G0035001.1 mouse_genomes_project 9 120157142 120158149 + Setd2 protein_coding retained_intron MGP_CBAJ_T0094283.1 MGP_CBAJ_G0034982.1 mouse_genomes_project 9 118592994 118593678 - MGP_CBAJ_P0094283 protein_coding protein_coding MGP_CBAJ_T0093788.1 MGP_CBAJ_G0034911.1 mouse_genomes_project 9 116417719 116422573 + MGP_CBAJ_P0093788 Hyal1 protein_coding protein_coding MGP_CBAJ_T0093789.1 MGP_CBAJ_G0034911.1 mouse_genomes_project 9 116417730 116420430 + MGP_CBAJ_P0093789 Hyal1 protein_coding protein_coding MGP_CBAJ_T0093790.1 MGP_CBAJ_G0034911.1 mouse_genomes_project 9 116417750 116421846 + MGP_CBAJ_P0093790 Hyal1 protein_coding protein_coding MGP_CBAJ_T0093791.1 MGP_CBAJ_G0034911.1 mouse_genomes_project 9 116417782 116420286 + MGP_CBAJ_P0093791 Hyal1 protein_coding protein_coding MGP_CBAJ_T0093798.1 MGP_CBAJ_G0034911.1 mouse_genomes_project 9 116420464 116422542 + Hyal1 protein_coding retained_intron MGP_CBAJ_T0092574.1 MGP_CBAJ_G0034662.1 mouse_genomes_project 9 75749079 75844088 + MGP_CBAJ_P0092574 Aldh1a2 protein_coding protein_coding MGP_CBAJ_T0092060.1 MGP_CBAJ_G0034529.1 mouse_genomes_project 9 60528429 60535149 - MGP_CBAJ_P0092060 Cyp1a2 protein_coding protein_coding MGP_CBAJ_T0094046.1 MGP_CBAJ_G0034948.1 mouse_genomes_project 9 117397458 117407463 + MGP_CBAJ_P0094046 BC048562 protein_coding protein_coding MGP_CBAJ_T0094047.1 MGP_CBAJ_G0034948.1 mouse_genomes_project 9 117397470 117407263 + BC048562 protein_coding processed_transcript MGP_CBAJ_T0092519.1 MGP_CBAJ_G0034648.1 mouse_genomes_project 9 74141806 74145027 - MGP_CBAJ_P0092519 Foxb1 protein_coding protein_coding MGP_CBAJ_T0002351.1 MGP_CBAJ_G0002264.1 mouse_genomes_project 9 81939081 81942332 + TEC TEC MGP_CBAJ_T0098477.1 MGP_CBAJ_G0036737.1 mouse_genomes_project 9 117573964 117574540 - Gm38163 sense_intronic sense_intronic MGP_CBAJ_T0094823.1 MGP_CBAJ_G0035115.1 mouse_genomes_project 9 134024461 134030847 - MGP_CBAJ_P0094823 Gm35549 protein_coding protein_coding MGP_CBAJ_T0094824.1 MGP_CBAJ_G0035115.1 mouse_genomes_project 9 134024461 134030847 - MGP_CBAJ_P0094824 Gm35549 protein_coding protein_coding MGP_CBAJ_T0094825.1 MGP_CBAJ_G0035115.1 mouse_genomes_project 9 134024461 134030847 - MGP_CBAJ_P0094825 Gm35549 protein_coding protein_coding MGP_CBAJ_T0093976.1 MGP_CBAJ_G0034934.1 mouse_genomes_project 9 116947790 116982195 - MGP_CBAJ_P0093976 Rnf123 protein_coding protein_coding MGP_CBAJ_T0093977.1 MGP_CBAJ_G0034934.1 mouse_genomes_project 9 116947928 116978153 - MGP_CBAJ_P0093977 Rnf123 protein_coding protein_coding MGP_CBAJ_T0093978.1 MGP_CBAJ_G0034934.1 mouse_genomes_project 9 116947933 116978589 - Rnf123 protein_coding retained_intron MGP_CBAJ_T0093979.1 MGP_CBAJ_G0034934.1 mouse_genomes_project 9 116947933 116978227 - MGP_CBAJ_P0093979 Rnf123 protein_coding protein_coding MGP_CBAJ_T0093980.1 MGP_CBAJ_G0034934.1 mouse_genomes_project 9 116947933 116978153 - MGP_CBAJ_P0093980 Rnf123 protein_coding protein_coding MGP_CBAJ_T0093981.1 MGP_CBAJ_G0034934.1 mouse_genomes_project 9 116947949 116948495 - Rnf123 protein_coding retained_intron MGP_CBAJ_T0093982.1 MGP_CBAJ_G0034934.1 mouse_genomes_project 9 116948489 116955995 - MGP_CBAJ_P0093982 Rnf123 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093983.1 MGP_CBAJ_G0034934.1 mouse_genomes_project 9 116948498 116978227 - MGP_CBAJ_P0093983 Rnf123 protein_coding protein_coding MGP_CBAJ_T0093984.1 MGP_CBAJ_G0034934.1 mouse_genomes_project 9 116948506 116948964 - Rnf123 protein_coding retained_intron MGP_CBAJ_T0093986.1 MGP_CBAJ_G0034934.1 mouse_genomes_project 9 116952163 116978577 - Rnf123 protein_coding retained_intron MGP_CBAJ_T0093987.1 MGP_CBAJ_G0034934.1 mouse_genomes_project 9 116952333 116953308 - Rnf123 protein_coding retained_intron MGP_CBAJ_T0093988.1 MGP_CBAJ_G0034934.1 mouse_genomes_project 9 116952826 116956030 - MGP_CBAJ_P0093988 Rnf123 protein_coding nonsense_mediated_decay MGP_CBAJ_T0093989.1 MGP_CBAJ_G0034934.1 mouse_genomes_project 9 116954436 116958254 - Rnf123 protein_coding retained_intron MGP_CBAJ_T0093990.1 MGP_CBAJ_G0034934.1 mouse_genomes_project 9 116967434 116977133 - MGP_CBAJ_P0093990 Rnf123 protein_coding protein_coding MGP_CBAJ_T0093991.1 MGP_CBAJ_G0034934.1 mouse_genomes_project 9 116967493 116978157 - MGP_CBAJ_P0093991 Rnf123 protein_coding protein_coding MGP_CBAJ_T0093992.1 MGP_CBAJ_G0034934.1 mouse_genomes_project 9 116967720 116978118 - MGP_CBAJ_P0093992 Rnf123 protein_coding protein_coding MGP_CBAJ_T0093993.1 MGP_CBAJ_G0034934.1 mouse_genomes_project 9 116976585 116982193 - MGP_CBAJ_P0093993 Rnf123 protein_coding protein_coding MGP_CBAJ_T0009208.1 MGP_CBAJ_G0007388.1 mouse_genomes_project 9 106446327 106516127 - E330023G01Rik lincRNA lincRNA MGP_CBAJ_T0092015.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59908379 59913892 + MGP_CBAJ_P0092015 Man2c1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092016.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59908379 59922451 + MGP_CBAJ_P0092016 Man2c1 protein_coding protein_coding MGP_CBAJ_T0092017.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59908457 59916517 + MGP_CBAJ_P0092017 Man2c1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092018.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59908457 59920439 + MGP_CBAJ_P0092018 Man2c1 protein_coding protein_coding MGP_CBAJ_T0092019.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59908459 59914868 + Man2c1 protein_coding retained_intron MGP_CBAJ_T0092020.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59908459 59921932 + MGP_CBAJ_P0092020 Man2c1 protein_coding protein_coding MGP_CBAJ_T0092021.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59908466 59908943 + Man2c1 protein_coding processed_transcript MGP_CBAJ_T0092022.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59908475 59919126 + MGP_CBAJ_P0092022 Man2c1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092023.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59908475 59921933 + MGP_CBAJ_P0092023 Man2c1 protein_coding protein_coding MGP_CBAJ_T0092024.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59908475 59917531 + MGP_CBAJ_P0092024 Man2c1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092025.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59909063 59914842 + Man2c1 protein_coding retained_intron MGP_CBAJ_T0092026.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59914679 59917251 + Man2c1 protein_coding retained_intron MGP_CBAJ_T0092027.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59915328 59916724 + MGP_CBAJ_P0092027 Man2c1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092028.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59916465 59917565 + Man2c1 protein_coding retained_intron MGP_CBAJ_T0092029.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59917770 59920457 + MGP_CBAJ_P0092029 Man2c1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092030.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59918153 59920140 + MGP_CBAJ_P0092030 Man2c1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0092031.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59918595 59919722 + Man2c1 protein_coding retained_intron MGP_CBAJ_T0092032.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59919227 59921942 + Man2c1 protein_coding retained_intron MGP_CBAJ_T0092033.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59919227 59920441 + Man2c1 protein_coding retained_intron MGP_CBAJ_T0092034.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59919605 59920908 + Man2c1 protein_coding retained_intron MGP_CBAJ_T0092035.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59920006 59921936 + Man2c1 protein_coding retained_intron MGP_CBAJ_T0092036.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59920411 59921942 + Man2c1 protein_coding retained_intron MGP_CBAJ_T0092037.1 MGP_CBAJ_G0034513.1 mouse_genomes_project 9 59921106 59921936 + Man2c1 protein_coding retained_intron MGP_CBAJ_T0010930.1 MGP_CBAJ_G0009068.1 mouse_genomes_project 9 42574592 42574669 + Mir125b-1 miRNA miRNA MGP_CBAJ_T0090794.1 MGP_CBAJ_G0034044.1 mouse_genomes_project 9 17492479 17493434 + MGP_CBAJ_P0090794 Olfr836 protein_coding protein_coding MGP_CBAJ_T0005352.1 MGP_CBAJ_G0004529.1 mouse_genomes_project 9 46646778 46648943 + Gm17099 antisense antisense MGP_CBAJ_T0015809.1 MGP_CBAJ_G0013921.1 mouse_genomes_project 9 42654213 42655194 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009221.1 MGP_CBAJ_G0007400.1 mouse_genomes_project 9 114753281 114754453 - Gm29208 lincRNA lincRNA MGP_CBAJ_T0092259.1 MGP_CBAJ_G0034577.1 mouse_genomes_project 9 66272658 66298015 - MGP_CBAJ_P0092259 Fem1b protein_coding protein_coding MGP_CBAJ_T0090575.1 MGP_CBAJ_G0033963.1 mouse_genomes_project 9 1065105 1082398 - MGP_CBAJ_P0090575 Aasdhppt protein_coding protein_coding MGP_CBAJ_T0094427.1 MGP_CBAJ_G0035004.1 mouse_genomes_project 9 120196142 120263541 + MGP_CBAJ_P0094427 Ccdc12 protein_coding protein_coding MGP_CBAJ_T0094428.1 MGP_CBAJ_G0035004.1 mouse_genomes_project 9 120196164 120197317 + Ccdc12 protein_coding retained_intron MGP_CBAJ_T0094429.1 MGP_CBAJ_G0035004.1 mouse_genomes_project 9 120196169 120253319 + Ccdc12 protein_coding retained_intron MGP_CBAJ_T0094430.1 MGP_CBAJ_G0035004.1 mouse_genomes_project 9 120196177 120263190 + MGP_CBAJ_P0094430 Ccdc12 protein_coding protein_coding MGP_CBAJ_T0094431.1 MGP_CBAJ_G0035004.1 mouse_genomes_project 9 120196181 120260668 + Ccdc12 protein_coding retained_intron MGP_CBAJ_T0094432.1 MGP_CBAJ_G0035004.1 mouse_genomes_project 9 120196251 120263448 + Ccdc12 protein_coding processed_transcript MGP_CBAJ_T0094433.1 MGP_CBAJ_G0035004.1 mouse_genomes_project 9 120208687 120263220 + Ccdc12 protein_coding processed_transcript MGP_CBAJ_T0094434.1 MGP_CBAJ_G0035004.1 mouse_genomes_project 9 120261804 120263522 + MGP_CBAJ_P0094434 Ccdc12 protein_coding protein_coding MGP_CBAJ_T0094435.1 MGP_CBAJ_G0035004.1 mouse_genomes_project 9 120261921 120263528 + Ccdc12 protein_coding retained_intron MGP_CBAJ_T0094436.1 MGP_CBAJ_G0035004.1 mouse_genomes_project 9 120261954 120263399 + Ccdc12 protein_coding retained_intron MGP_CBAJ_T0091067.1 MGP_CBAJ_G0034158.1 mouse_genomes_project 9 26269747 26282560 + MGP_CBAJ_P0091067 Thyn1 protein_coding protein_coding MGP_CBAJ_T0091201.1 MGP_CBAJ_G0034194.1 mouse_genomes_project 9 35656250 35784759 + MGP_CBAJ_P0091201 Pate2 protein_coding protein_coding MGP_CBAJ_T0091202.1 MGP_CBAJ_G0034194.1 mouse_genomes_project 9 35659830 35732073 + Pate2 protein_coding processed_transcript MGP_CBAJ_T0091205.1 MGP_CBAJ_G0034194.1 mouse_genomes_project 9 35763145 35766407 + MGP_CBAJ_P0091205 Pate2 protein_coding protein_coding MGP_CBAJ_T0091206.1 MGP_CBAJ_G0034194.1 mouse_genomes_project 9 35763157 35764924 + Pate2 protein_coding retained_intron MGP_CBAJ_T0091405.1 MGP_CBAJ_G0034318.1 mouse_genomes_project 9 40932386 40935153 + MGP_CBAJ_P0091405 Tmem225 protein_coding protein_coding MGP_CBAJ_T0091360.1 MGP_CBAJ_G0034279.1 mouse_genomes_project 9 39653074 39654010 - MGP_CBAJ_P0091360 Olfr936 protein_coding protein_coding MGP_CBAJ_T0002398.1 MGP_CBAJ_G0002310.1 mouse_genomes_project 9 109271044 109273739 - TEC TEC MGP_CBAJ_T0100911.1 MGP_CBAJ_G0039166.1 mouse_genomes_project 9 117829873 117830020 - Gm23034 snoRNA snoRNA MGP_CBAJ_T0091210.1 MGP_CBAJ_G0034199.1 mouse_genomes_project 9 35878296 35891706 - MGP_CBAJ_P0091210 Gm27235 protein_coding nonsense_mediated_decay MGP_CBAJ_T0002334.1 MGP_CBAJ_G0002247.1 mouse_genomes_project 9 77010484 77011470 + TEC TEC MGP_CBAJ_T0091932.1 MGP_CBAJ_G0034487.1 mouse_genomes_project 9 57459033 57459780 - MGP_CBAJ_P0091932 AY074887 protein_coding protein_coding MGP_CBAJ_T0091980.1 MGP_CBAJ_G0034500.1 mouse_genomes_project 9 58672066 58697473 + MGP_CBAJ_P0091980 Rcn2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0091981.1 MGP_CBAJ_G0034500.1 mouse_genomes_project 9 58672078 58694668 + MGP_CBAJ_P0091981 Rcn2 protein_coding protein_coding MGP_CBAJ_T0091982.1 MGP_CBAJ_G0034500.1 mouse_genomes_project 9 58672091 58674445 + Rcn2 protein_coding retained_intron MGP_CBAJ_T0091983.1 MGP_CBAJ_G0034500.1 mouse_genomes_project 9 58672106 58685975 + Rcn2 protein_coding retained_intron MGP_CBAJ_T0092544.1 MGP_CBAJ_G0034652.1 mouse_genomes_project 9 74512833 74571632 - MGP_CBAJ_P0092544 Fam81a protein_coding protein_coding MGP_CBAJ_T0092545.1 MGP_CBAJ_G0034652.1 mouse_genomes_project 9 74525886 74526413 - Fam81a protein_coding retained_intron MGP_CBAJ_T0092546.1 MGP_CBAJ_G0034652.1 mouse_genomes_project 9 74554984 74571857 - MGP_CBAJ_P0092546 Fam81a protein_coding protein_coding MGP_CBAJ_T0092547.1 MGP_CBAJ_G0034652.1 mouse_genomes_project 9 74555015 74572566 - MGP_CBAJ_P0092547 Fam81a protein_coding protein_coding MGP_CBAJ_T0091104.1 MGP_CBAJ_G0034171.1 mouse_genomes_project 9 30708543 30758786 - MGP_CBAJ_P0091104 St14 protein_coding protein_coding MGP_CBAJ_T0091105.1 MGP_CBAJ_G0034171.1 mouse_genomes_project 9 30720061 30758729 - St14 protein_coding retained_intron MGP_CBAJ_T0091106.1 MGP_CBAJ_G0034171.1 mouse_genomes_project 9 30720661 30723572 - St14 protein_coding retained_intron MGP_CBAJ_T0091107.1 MGP_CBAJ_G0034171.1 mouse_genomes_project 9 30726816 30758729 - MGP_CBAJ_P0091107 St14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0090804.1 MGP_CBAJ_G0034054.1 mouse_genomes_project 9 17990809 17991757 - MGP_CBAJ_P0090804 Olfr854 protein_coding protein_coding MGP_CBAJ_T0003235.1 MGP_CBAJ_G0002988.1 mouse_genomes_project 11 114106261 114108458 - Gm20511 antisense antisense MGP_CBAJ_T0006235.1 MGP_CBAJ_G0005195.1 mouse_genomes_project 11 105719120 105720370 + Gm11535 lincRNA lincRNA MGP_CBAJ_T0000811.1 MGP_CBAJ_G0000747.1 mouse_genomes_project 11 32293552 32293927 + TEC TEC MGP_CBAJ_T0012342.1 MGP_CBAJ_G0010454.1 mouse_genomes_project 11 13359971 13362278 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006182.1 MGP_CBAJ_G0005158.1 mouse_genomes_project 11 77794773 77796808 - Gm12325 lincRNA lincRNA MGP_CBAJ_T0028800.1 MGP_CBAJ_G0018043.1 mouse_genomes_project 11 58286636 58478977 + MGP_CBAJ_P0028800 Rapgef6 protein_coding protein_coding MGP_CBAJ_T0028801.1 MGP_CBAJ_G0018043.1 mouse_genomes_project 11 58286678 58320068 + Rapgef6 protein_coding processed_transcript MGP_CBAJ_T0028802.1 MGP_CBAJ_G0018043.1 mouse_genomes_project 11 58286679 58476671 + MGP_CBAJ_P0028802 Rapgef6 protein_coding protein_coding MGP_CBAJ_T0028803.1 MGP_CBAJ_G0018043.1 mouse_genomes_project 11 58286679 58404885 + MGP_CBAJ_P0028803 Rapgef6 protein_coding protein_coding MGP_CBAJ_T0028804.1 MGP_CBAJ_G0018043.1 mouse_genomes_project 11 58286700 58329897 + Rapgef6 protein_coding processed_transcript MGP_CBAJ_T0028805.1 MGP_CBAJ_G0018043.1 mouse_genomes_project 11 58286839 58475797 + MGP_CBAJ_P0028805 Rapgef6 protein_coding unknown_likely_coding MGP_CBAJ_T0028806.1 MGP_CBAJ_G0018043.1 mouse_genomes_project 11 58359372 58408740 + Rapgef6 protein_coding processed_transcript MGP_CBAJ_T0028807.1 MGP_CBAJ_G0018043.1 mouse_genomes_project 11 58392241 58466104 + MGP_CBAJ_P0028807 Rapgef6 protein_coding protein_coding MGP_CBAJ_T0028808.1 MGP_CBAJ_G0018043.1 mouse_genomes_project 11 58392241 58466183 + MGP_CBAJ_P0028808 Rapgef6 protein_coding protein_coding MGP_CBAJ_T0028809.1 MGP_CBAJ_G0018043.1 mouse_genomes_project 11 58469510 58476178 + MGP_CBAJ_P0028809 Rapgef6 protein_coding protein_coding MGP_CBAJ_T0030239.1 MGP_CBAJ_G0018400.1 mouse_genomes_project 11 80210188 80211127 - MGP_CBAJ_P0030239 Olfr393 protein_coding protein_coding MGP_CBAJ_T0003207.1 MGP_CBAJ_G0002965.1 mouse_genomes_project 11 106561015 106564252 - Gm11525 antisense antisense MGP_CBAJ_T0027975.1 MGP_CBAJ_G0017825.1 mouse_genomes_project 11 25385839 25432902 - 5730522E02Rik protein_coding processed_transcript MGP_CBAJ_T0027976.1 MGP_CBAJ_G0017825.1 mouse_genomes_project 11 25385892 25400338 - 5730522E02Rik protein_coding processed_transcript MGP_CBAJ_T0027977.1 MGP_CBAJ_G0017825.1 mouse_genomes_project 11 25397909 26085950 - 5730522E02Rik protein_coding processed_transcript MGP_CBAJ_T0027978.1 MGP_CBAJ_G0017825.1 mouse_genomes_project 11 25399326 26085953 - MGP_CBAJ_P0027978 5730522E02Rik protein_coding protein_coding MGP_CBAJ_T0027979.1 MGP_CBAJ_G0017825.1 mouse_genomes_project 11 25417720 25436635 - 5730522E02Rik protein_coding processed_transcript MGP_CBAJ_T0027980.1 MGP_CBAJ_G0017825.1 mouse_genomes_project 11 25432668 25587347 - MGP_CBAJ_P0027980 5730522E02Rik protein_coding protein_coding MGP_CBAJ_T0027981.1 MGP_CBAJ_G0017825.1 mouse_genomes_project 11 25669760 25930758 - 5730522E02Rik protein_coding processed_transcript MGP_CBAJ_T0027982.1 MGP_CBAJ_G0017825.1 mouse_genomes_project 11 25954229 26086144 - 5730522E02Rik protein_coding processed_transcript MGP_CBAJ_T0032665.1 MGP_CBAJ_G0019014.1 mouse_genomes_project 11 117483462 117487349 - MGP_CBAJ_P0032665 Limd2 protein_coding protein_coding MGP_CBAJ_T0032666.1 MGP_CBAJ_G0019014.1 mouse_genomes_project 11 117485520 117486616 - Limd2 protein_coding processed_transcript MGP_CBAJ_T0032667.1 MGP_CBAJ_G0019014.1 mouse_genomes_project 11 117485637 117487134 - MGP_CBAJ_P0032667 Limd2 protein_coding protein_coding MGP_CBAJ_T0032668.1 MGP_CBAJ_G0019014.1 mouse_genomes_project 11 117485857 117490473 - MGP_CBAJ_P0032668 Limd2 protein_coding protein_coding MGP_CBAJ_T0006158.1 MGP_CBAJ_G0005139.1 mouse_genomes_project 11 65453415 65461340 + Gm26534 lincRNA lincRNA MGP_CBAJ_T0028161.1 MGP_CBAJ_G0017866.1 mouse_genomes_project 11 33405368 33525752 + MGP_CBAJ_P0028161 Fbxw11 protein_coding protein_coding MGP_CBAJ_T0028162.1 MGP_CBAJ_G0017866.1 mouse_genomes_project 11 33405428 33419655 + Fbxw11 protein_coding processed_transcript MGP_CBAJ_T0028163.1 MGP_CBAJ_G0017866.1 mouse_genomes_project 11 33405510 33525972 + MGP_CBAJ_P0028163 Fbxw11 protein_coding protein_coding MGP_CBAJ_T0028164.1 MGP_CBAJ_G0017866.1 mouse_genomes_project 11 33405519 33525999 + MGP_CBAJ_P0028164 Fbxw11 protein_coding protein_coding MGP_CBAJ_T0028165.1 MGP_CBAJ_G0017866.1 mouse_genomes_project 11 33405548 33498276 + MGP_CBAJ_P0028165 Fbxw11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027983.1 MGP_CBAJ_G0017826.1 mouse_genomes_project 11 26297946 26381488 + Fancl protein_coding processed_transcript MGP_CBAJ_T0027984.1 MGP_CBAJ_G0017826.1 mouse_genomes_project 11 26297946 26344210 + MGP_CBAJ_P0027984 Fancl protein_coding protein_coding MGP_CBAJ_T0027985.1 MGP_CBAJ_G0017826.1 mouse_genomes_project 11 26297959 26383722 + MGP_CBAJ_P0027985 Fancl protein_coding protein_coding MGP_CBAJ_T0027986.1 MGP_CBAJ_G0017826.1 mouse_genomes_project 11 26380698 26383792 + MGP_CBAJ_P0027986 Fancl protein_coding protein_coding MGP_CBAJ_T0031404.1 MGP_CBAJ_G0018688.1 mouse_genomes_project 11 103829721 103833801 + MGP_CBAJ_P0031404 Chad protein_coding protein_coding MGP_CBAJ_T0028703.1 MGP_CBAJ_G0018018.1 mouse_genomes_project 11 56977277 56982960 + Gdf9 protein_coding processed_transcript MGP_CBAJ_T0028704.1 MGP_CBAJ_G0018018.1 mouse_genomes_project 11 56979096 56980035 + Gdf9 protein_coding processed_transcript MGP_CBAJ_T0028705.1 MGP_CBAJ_G0018018.1 mouse_genomes_project 11 56979553 56983962 + MGP_CBAJ_P0028705 Gdf9 protein_coding protein_coding MGP_CBAJ_T0009636.1 MGP_CBAJ_G0007774.1 mouse_genomes_project 11 115504213 115504358 - miRNA miRNA MGP_CBAJ_T0012579.1 MGP_CBAJ_G0010691.1 mouse_genomes_project 11 112050356 112050652 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006092.1 MGP_CBAJ_G0005080.1 mouse_genomes_project 11 18576059 18577360 - Gm12027 lincRNA lincRNA MGP_CBAJ_T0030240.1 MGP_CBAJ_G0018401.1 mouse_genomes_project 11 80237602 80238535 - MGP_CBAJ_P0030240 Olfr394 protein_coding protein_coding MGP_CBAJ_T0033816.1 MGP_CBAJ_G0019246.1 mouse_genomes_project 11 134036151 134039009 - MGP_CBAJ_P0033816 Cbr2 protein_coding protein_coding MGP_CBAJ_T0033817.1 MGP_CBAJ_G0019246.1 mouse_genomes_project 11 134036166 134036779 - Cbr2 protein_coding retained_intron MGP_CBAJ_T0033818.1 MGP_CBAJ_G0019246.1 mouse_genomes_project 11 134036384 134038867 - MGP_CBAJ_P0033818 Cbr2 protein_coding unknown_likely_coding MGP_CBAJ_T0033819.1 MGP_CBAJ_G0019246.1 mouse_genomes_project 11 134036441 134038839 - MGP_CBAJ_P0033819 Cbr2 protein_coding protein_coding MGP_CBAJ_T0033820.1 MGP_CBAJ_G0019246.1 mouse_genomes_project 11 134036786 134038847 - Cbr2 protein_coding retained_intron MGP_CBAJ_T0098684.1 MGP_CBAJ_G0036939.1 mouse_genomes_project 11 55274143 55274251 + Gm26061 snRNA snRNA MGP_CBAJ_T0003222.1 MGP_CBAJ_G0002975.1 mouse_genomes_project 11 110400009 110436103 + Gm11571 antisense antisense MGP_CBAJ_T0031787.1 MGP_CBAJ_G0018788.1 mouse_genomes_project 11 108419254 108508120 - MGP_CBAJ_P0031787 Ikzf3 protein_coding protein_coding MGP_CBAJ_T0031788.1 MGP_CBAJ_G0018788.1 mouse_genomes_project 11 108421610 108432103 - Ikzf3 protein_coding processed_transcript MGP_CBAJ_T0031789.1 MGP_CBAJ_G0018788.1 mouse_genomes_project 11 108438899 108443592 - Ikzf3 protein_coding processed_transcript MGP_CBAJ_T0031790.1 MGP_CBAJ_G0018788.1 mouse_genomes_project 11 108467316 108508351 - Ikzf3 protein_coding retained_intron MGP_CBAJ_T0032267.1 MGP_CBAJ_G0018933.1 mouse_genomes_project 11 112532736 112551417 - MGP_CBAJ_P0032267 Meox1 protein_coding protein_coding MGP_CBAJ_T0028015.1 MGP_CBAJ_G0017833.1 mouse_genomes_project 11 29487935 29513174 - MGP_CBAJ_P0028015 Cfap36 protein_coding protein_coding MGP_CBAJ_T0028016.1 MGP_CBAJ_G0017833.1 mouse_genomes_project 11 29492175 29513053 - Cfap36 protein_coding retained_intron MGP_CBAJ_T0028017.1 MGP_CBAJ_G0017833.1 mouse_genomes_project 11 29497033 29512687 - MGP_CBAJ_P0028017 Cfap36 protein_coding protein_coding MGP_CBAJ_T0028018.1 MGP_CBAJ_G0017833.1 mouse_genomes_project 11 29509559 29512833 - Cfap36 protein_coding retained_intron MGP_CBAJ_T0028019.1 MGP_CBAJ_G0017833.1 mouse_genomes_project 11 29510468 29512957 - Cfap36 protein_coding retained_intron MGP_CBAJ_T0009607.1 MGP_CBAJ_G0007745.1 mouse_genomes_project 11 94638946 94639038 - Mir21a miRNA miRNA MGP_CBAJ_T0003144.1 MGP_CBAJ_G0002916.1 mouse_genomes_project 11 74183682 74187399 - Ccdc42os antisense antisense MGP_CBAJ_T0028062.1 MGP_CBAJ_G0017841.1 mouse_genomes_project 11 30452220 30631989 - MGP_CBAJ_P0028062 Sptbn1 protein_coding protein_coding MGP_CBAJ_T0028063.1 MGP_CBAJ_G0017841.1 mouse_genomes_project 11 30452221 30456075 - Sptbn1 protein_coding retained_intron MGP_CBAJ_T0028064.1 MGP_CBAJ_G0017841.1 mouse_genomes_project 11 30452221 30580088 - MGP_CBAJ_P0028064 Sptbn1 protein_coding protein_coding MGP_CBAJ_T0028065.1 MGP_CBAJ_G0017841.1 mouse_genomes_project 11 30454338 30458436 - Sptbn1 protein_coding retained_intron MGP_CBAJ_T0028066.1 MGP_CBAJ_G0017841.1 mouse_genomes_project 11 30459610 30558494 - MGP_CBAJ_P0028066 Sptbn1 protein_coding protein_coding MGP_CBAJ_T0028067.1 MGP_CBAJ_G0017841.1 mouse_genomes_project 11 30462692 30464181 - Sptbn1 protein_coding retained_intron MGP_CBAJ_T0028068.1 MGP_CBAJ_G0017841.1 mouse_genomes_project 11 30462769 30631034 - MGP_CBAJ_P0028068 Sptbn1 protein_coding protein_coding MGP_CBAJ_T0028069.1 MGP_CBAJ_G0017841.1 mouse_genomes_project 11 30576887 30631995 - Sptbn1 protein_coding retained_intron MGP_CBAJ_T0027597.1 MGP_CBAJ_G0017735.1 mouse_genomes_project 11 3296686 3308798 + MGP_CBAJ_P0027597 Dbnl protein_coding protein_coding MGP_CBAJ_T0027598.1 MGP_CBAJ_G0017735.1 mouse_genomes_project 11 3296720 3308457 + MGP_CBAJ_P0027598 Dbnl protein_coding protein_coding MGP_CBAJ_T0027599.1 MGP_CBAJ_G0017735.1 mouse_genomes_project 11 3296728 3309131 + MGP_CBAJ_P0027599 Dbnl protein_coding protein_coding MGP_CBAJ_T0098689.1 MGP_CBAJ_G0036944.1 mouse_genomes_project 11 65294358 65294455 + Gm23341 snRNA snRNA MGP_CBAJ_T0031519.1 MGP_CBAJ_G0018721.1 mouse_genomes_project 11 105532828 105545035 + MGP_CBAJ_P0031519 Snf8 protein_coding protein_coding MGP_CBAJ_T0031520.1 MGP_CBAJ_G0018721.1 mouse_genomes_project 11 105532899 105541303 + Snf8 protein_coding processed_transcript MGP_CBAJ_T0031521.1 MGP_CBAJ_G0018721.1 mouse_genomes_project 11 105532908 105545035 + MGP_CBAJ_P0031521 Snf8 protein_coding protein_coding MGP_CBAJ_T0031522.1 MGP_CBAJ_G0018721.1 mouse_genomes_project 11 105542289 105545035 + Snf8 protein_coding processed_transcript MGP_CBAJ_T0031523.1 MGP_CBAJ_G0018721.1 mouse_genomes_project 11 105542423 105544916 + Snf8 protein_coding processed_transcript MGP_CBAJ_T0028207.1 MGP_CBAJ_G0017881.1 mouse_genomes_project 11 35899945 35924160 - MGP_CBAJ_P0028207 Spdl1 protein_coding protein_coding MGP_CBAJ_T0028208.1 MGP_CBAJ_G0017881.1 mouse_genomes_project 11 35912522 35914433 - Spdl1 protein_coding retained_intron MGP_CBAJ_T0028209.1 MGP_CBAJ_G0017881.1 mouse_genomes_project 11 35920772 35924111 - Spdl1 protein_coding retained_intron MGP_CBAJ_T0030396.1 MGP_CBAJ_G0018444.1 mouse_genomes_project 11 82316031 82347650 + MGP_CBAJ_P0030396 Crk protein_coding protein_coding MGP_CBAJ_T0030397.1 MGP_CBAJ_G0018444.1 mouse_genomes_project 11 82316056 82345241 + MGP_CBAJ_P0030397 Crk protein_coding protein_coding MGP_CBAJ_T0030398.1 MGP_CBAJ_G0018444.1 mouse_genomes_project 11 82316056 82348493 + MGP_CBAJ_P0030398 Crk protein_coding protein_coding MGP_CBAJ_T0030399.1 MGP_CBAJ_G0018444.1 mouse_genomes_project 11 82316083 82342375 + MGP_CBAJ_P0030399 Crk protein_coding protein_coding MGP_CBAJ_T0030400.1 MGP_CBAJ_G0018444.1 mouse_genomes_project 11 82316314 82342323 + MGP_CBAJ_P0030400 Crk protein_coding protein_coding MGP_CBAJ_T0098669.1 MGP_CBAJ_G0036924.1 mouse_genomes_project 11 14072293 14072400 + Gm24707 snRNA snRNA MGP_CBAJ_T0003296.1 MGP_CBAJ_G0003038.1 mouse_genomes_project 11 134162765 134165981 + Gm11773 antisense antisense MGP_CBAJ_T0009596.1 MGP_CBAJ_G0007734.1 mouse_genomes_project 11 82159868 82159951 + Mir3971 miRNA miRNA MGP_CBAJ_T0029710.1 MGP_CBAJ_G0018275.1 mouse_genomes_project 11 75499269 75501978 - MGP_CBAJ_P0029710 Tnfsf13 protein_coding protein_coding MGP_CBAJ_T0029711.1 MGP_CBAJ_G0018275.1 mouse_genomes_project 11 75499355 75502208 - MGP_CBAJ_P0029711 Tnfsf13 protein_coding protein_coding MGP_CBAJ_T0032891.1 MGP_CBAJ_G0019062.1 mouse_genomes_project 11 121971347 122044091 - MGP_CBAJ_P0032891 Abca9 protein_coding protein_coding MGP_CBAJ_T0032892.1 MGP_CBAJ_G0019062.1 mouse_genomes_project 11 122028131 122043950 - Abca9 protein_coding processed_transcript MGP_CBAJ_T0028716.1 MGP_CBAJ_G0018024.1 mouse_genomes_project 11 57082026 57100895 + MGP_CBAJ_P0028716 Sept8 protein_coding protein_coding MGP_CBAJ_T0028717.1 MGP_CBAJ_G0018024.1 mouse_genomes_project 11 57082515 57113543 + MGP_CBAJ_P0028717 Sept8 protein_coding protein_coding MGP_CBAJ_T0028718.1 MGP_CBAJ_G0018024.1 mouse_genomes_project 11 57082539 57119013 + MGP_CBAJ_P0028718 Sept8 protein_coding protein_coding MGP_CBAJ_T0028719.1 MGP_CBAJ_G0018024.1 mouse_genomes_project 11 57082569 57113544 + MGP_CBAJ_P0028719 Sept8 protein_coding protein_coding MGP_CBAJ_T0028720.1 MGP_CBAJ_G0018024.1 mouse_genomes_project 11 57082677 57111346 + MGP_CBAJ_P0028720 Sept8 protein_coding protein_coding MGP_CBAJ_T0028721.1 MGP_CBAJ_G0018024.1 mouse_genomes_project 11 57082696 57111295 + MGP_CBAJ_P0028721 Sept8 protein_coding protein_coding MGP_CBAJ_T0028722.1 MGP_CBAJ_G0018024.1 mouse_genomes_project 11 57094817 57103558 + Sept8 protein_coding processed_transcript MGP_CBAJ_T0011176.1 MGP_CBAJ_G0009314.1 mouse_genomes_project 11 62130096 62130367 + Gm26025 misc_RNA misc_RNA MGP_CBAJ_T0012351.1 MGP_CBAJ_G0010463.1 mouse_genomes_project 11 16500312 16500994 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097755.1 MGP_CBAJ_G0036028.1 mouse_genomes_project 11 63554112 63554590 - pseudogene pseudogene MGP_CBAJ_T0006291.1 MGP_CBAJ_G0005237.1 mouse_genomes_project 11 133933250 133934608 + Gm17586 lincRNA lincRNA MGP_CBAJ_T0012355.1 MGP_CBAJ_G0010467.1 mouse_genomes_project 11 17482185 17483431 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016924.1 MGP_CBAJ_G0014904.1 mouse_genomes_project 11 34996865 35130273 - 4930469K13Rik processed_transcript processed_transcript MGP_CBAJ_T0032589.1 MGP_CBAJ_G0018996.1 mouse_genomes_project 11 115592603 115643749 - MGP_CBAJ_P0032589 Cdc27 protein_coding protein_coding MGP_CBAJ_T0032590.1 MGP_CBAJ_G0018996.1 mouse_genomes_project 11 115594795 115643658 - MGP_CBAJ_P0032590 Cdc27 protein_coding protein_coding MGP_CBAJ_T0032591.1 MGP_CBAJ_G0018996.1 mouse_genomes_project 11 115598205 115603111 - Cdc27 protein_coding processed_transcript MGP_CBAJ_T0032592.1 MGP_CBAJ_G0018996.1 mouse_genomes_project 11 115610302 115643744 - MGP_CBAJ_P0032592 Cdc27 protein_coding protein_coding MGP_CBAJ_T0032593.1 MGP_CBAJ_G0018996.1 mouse_genomes_project 11 115625238 115643886 - Cdc27 protein_coding processed_transcript MGP_CBAJ_T0101552.1 MGP_CBAJ_G0039584.1 mouse_genomes_project 11 91408338 91409182 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0031206.1 MGP_CBAJ_G0018640.1 mouse_genomes_project 11 96107015 96120602 - MGP_CBAJ_P0031206 Epx protein_coding protein_coding MGP_CBAJ_T0031207.1 MGP_CBAJ_G0018640.1 mouse_genomes_project 11 96114467 96116870 - Epx protein_coding processed_transcript MGP_CBAJ_T0033002.1 MGP_CBAJ_G0019090.1 mouse_genomes_project 11 127478269 127482836 - MGP_CBAJ_P0033002 protein_coding protein_coding MGP_CBAJ_T0012532.1 MGP_CBAJ_G0010644.1 mouse_genomes_project 11 86654425 86654879 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0033039.1 MGP_CBAJ_G0019101.1 mouse_genomes_project 11 127819715 127826552 - MGP_CBAJ_P0033039 Ush1g protein_coding protein_coding MGP_CBAJ_T0030709.1 MGP_CBAJ_G0018512.1 mouse_genomes_project 11 85649642 85658384 - MGP_CBAJ_P0030709 Tmem97 protein_coding protein_coding MGP_CBAJ_T0027643.1 MGP_CBAJ_G0017746.1 mouse_genomes_project 11 3799115 3818372 - MGP_CBAJ_P0027643 Npc1l1 protein_coding protein_coding MGP_CBAJ_T0101542.1 MGP_CBAJ_G0039574.1 mouse_genomes_project 11 79794381 79794466 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0101539.1 MGP_CBAJ_G0039571.1 mouse_genomes_project 11 62859456 62859848 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0028606.1 MGP_CBAJ_G0017993.1 mouse_genomes_project 11 54496464 54822349 + MGP_CBAJ_P0028606 Col23a1 protein_coding protein_coding MGP_CBAJ_T0028607.1 MGP_CBAJ_G0017993.1 mouse_genomes_project 11 54496671 54816107 + MGP_CBAJ_P0028607 Col23a1 protein_coding unknown_likely_coding MGP_CBAJ_T0028608.1 MGP_CBAJ_G0017993.1 mouse_genomes_project 11 54757518 54816107 + MGP_CBAJ_P0028608 Col23a1 protein_coding unknown_likely_coding MGP_CBAJ_T0028609.1 MGP_CBAJ_G0017993.1 mouse_genomes_project 11 54813391 54818730 + MGP_CBAJ_P0028609 Col23a1 protein_coding protein_coding MGP_CBAJ_T0003168.1 MGP_CBAJ_G0002937.1 mouse_genomes_project 11 88495203 88506154 + Gm11417 antisense antisense MGP_CBAJ_T0031894.1 MGP_CBAJ_G0018812.1 mouse_genomes_project 11 109439334 109444596 - MGP_CBAJ_P0031894 Krt24 protein_coding protein_coding MGP_CBAJ_T0003072.1 MGP_CBAJ_G0002855.1 mouse_genomes_project 11 45225750 45291684 - Gm12146 antisense antisense MGP_CBAJ_T0032011.1 MGP_CBAJ_G0018880.1 mouse_genomes_project 11 110985767 110992592 + MGP_CBAJ_P0032011 Cnp protein_coding protein_coding MGP_CBAJ_T0032012.1 MGP_CBAJ_G0018880.1 mouse_genomes_project 11 110985975 110987314 + Cnp protein_coding processed_transcript MGP_CBAJ_T0032013.1 MGP_CBAJ_G0018880.1 mouse_genomes_project 11 110986387 110992592 + Cnp protein_coding processed_transcript MGP_CBAJ_T0032014.1 MGP_CBAJ_G0018880.1 mouse_genomes_project 11 110986754 111002531 + Cnp protein_coding processed_transcript MGP_CBAJ_T0101543.1 MGP_CBAJ_G0039575.1 mouse_genomes_project 11 79857740 79858675 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0032722.1 MGP_CBAJ_G0019029.1 mouse_genomes_project 11 117874931 118006096 - MGP_CBAJ_P0032722 Tex2 protein_coding unknown_likely_coding MGP_CBAJ_T0032723.1 MGP_CBAJ_G0019029.1 mouse_genomes_project 11 117874943 118006053 - MGP_CBAJ_P0032723 Tex2 protein_coding protein_coding MGP_CBAJ_T0032724.1 MGP_CBAJ_G0019029.1 mouse_genomes_project 11 117924079 117968473 - MGP_CBAJ_P0032724 Tex2 protein_coding protein_coding MGP_CBAJ_T0032725.1 MGP_CBAJ_G0019029.1 mouse_genomes_project 11 117953413 118006546 - MGP_CBAJ_P0032725 Tex2 protein_coding protein_coding MGP_CBAJ_T0032726.1 MGP_CBAJ_G0019029.1 mouse_genomes_project 11 117953798 117969960 - MGP_CBAJ_P0032726 Tex2 protein_coding protein_coding MGP_CBAJ_T0003280.1 MGP_CBAJ_G0003026.1 mouse_genomes_project 11 130837143 130853548 + Gm11725 antisense antisense MGP_CBAJ_T0033887.1 MGP_CBAJ_G0019262.1 mouse_genomes_project 11 134607054 134613776 - MGP_CBAJ_P0033887 BC017643 protein_coding protein_coding MGP_CBAJ_T0033888.1 MGP_CBAJ_G0019262.1 mouse_genomes_project 11 134607054 134613772 - MGP_CBAJ_P0033888 BC017643 protein_coding protein_coding MGP_CBAJ_T0033889.1 MGP_CBAJ_G0019262.1 mouse_genomes_project 11 134608130 134613253 - BC017643 protein_coding retained_intron MGP_CBAJ_T0033890.1 MGP_CBAJ_G0019262.1 mouse_genomes_project 11 134608413 134611849 - BC017643 protein_coding retained_intron MGP_CBAJ_T0033891.1 MGP_CBAJ_G0019262.1 mouse_genomes_project 11 134608692 134613562 - MGP_CBAJ_P0033891 BC017643 protein_coding protein_coding MGP_CBAJ_T0033892.1 MGP_CBAJ_G0019262.1 mouse_genomes_project 11 134609036 134613702 - MGP_CBAJ_P0033892 BC017643 protein_coding protein_coding MGP_CBAJ_T0033893.1 MGP_CBAJ_G0019262.1 mouse_genomes_project 11 134609063 134613789 - MGP_CBAJ_P0033893 BC017643 protein_coding protein_coding MGP_CBAJ_T0033894.1 MGP_CBAJ_G0019262.1 mouse_genomes_project 11 134611237 134613690 - BC017643 protein_coding processed_transcript MGP_CBAJ_T0028310.1 MGP_CBAJ_G0017908.1 mouse_genomes_project 11 46688545 46703625 - MGP_CBAJ_P0028310 Ublcp1 protein_coding protein_coding MGP_CBAJ_T0028311.1 MGP_CBAJ_G0017908.1 mouse_genomes_project 11 46688600 46697144 - Ublcp1 protein_coding processed_transcript MGP_CBAJ_T0028312.1 MGP_CBAJ_G0017908.1 mouse_genomes_project 11 46689304 46694401 - Ublcp1 protein_coding processed_transcript MGP_CBAJ_T0028313.1 MGP_CBAJ_G0017908.1 mouse_genomes_project 11 46698746 46700200 - Ublcp1 protein_coding processed_transcript MGP_CBAJ_T0029068.1 MGP_CBAJ_G0018139.1 mouse_genomes_project 11 64586482 64686943 + Rai1 protein_coding processed_transcript MGP_CBAJ_T0029069.1 MGP_CBAJ_G0018139.1 mouse_genomes_project 11 64586482 64686941 + MGP_CBAJ_P0029069 Rai1 protein_coding protein_coding MGP_CBAJ_T0029070.1 MGP_CBAJ_G0018139.1 mouse_genomes_project 11 64586646 64673077 + MGP_CBAJ_P0029070 Rai1 protein_coding protein_coding MGP_CBAJ_T0029071.1 MGP_CBAJ_G0018139.1 mouse_genomes_project 11 64625073 64686941 + MGP_CBAJ_P0029071 Rai1 protein_coding protein_coding MGP_CBAJ_T0029072.1 MGP_CBAJ_G0018139.1 mouse_genomes_project 11 64625075 64679679 + MGP_CBAJ_P0029072 Rai1 protein_coding protein_coding MGP_CBAJ_T0029073.1 MGP_CBAJ_G0018139.1 mouse_genomes_project 11 64625250 64628967 + Rai1 protein_coding processed_transcript MGP_CBAJ_T0029074.1 MGP_CBAJ_G0018139.1 mouse_genomes_project 11 64663437 64686944 + MGP_CBAJ_P0029074 Rai1 protein_coding protein_coding MGP_CBAJ_T0031885.1 MGP_CBAJ_G0018810.1 mouse_genomes_project 11 109350262 109371860 - MGP_CBAJ_P0031885 Smarce1 protein_coding protein_coding MGP_CBAJ_T0031886.1 MGP_CBAJ_G0018810.1 mouse_genomes_project 11 109351210 109354268 - Smarce1 protein_coding processed_transcript MGP_CBAJ_T0031887.1 MGP_CBAJ_G0018810.1 mouse_genomes_project 11 109360045 109361658 - Smarce1 protein_coding processed_transcript MGP_CBAJ_T0031888.1 MGP_CBAJ_G0018810.1 mouse_genomes_project 11 109360454 109371288 - Smarce1 protein_coding processed_transcript MGP_CBAJ_T0031889.1 MGP_CBAJ_G0018810.1 mouse_genomes_project 11 109360534 109371256 - Smarce1 protein_coding processed_transcript MGP_CBAJ_T0031890.1 MGP_CBAJ_G0018810.1 mouse_genomes_project 11 109366134 109371289 - Smarce1 protein_coding processed_transcript MGP_CBAJ_T0028339.1 MGP_CBAJ_G0017915.1 mouse_genomes_project 11 48457171 48565443 + MGP_CBAJ_P0028339 Adam19 protein_coding protein_coding MGP_CBAJ_T0028340.1 MGP_CBAJ_G0017915.1 mouse_genomes_project 11 48457237 48468527 + Adam19 protein_coding processed_transcript MGP_CBAJ_T0028341.1 MGP_CBAJ_G0017915.1 mouse_genomes_project 11 48543465 48561948 + Adam19 protein_coding processed_transcript MGP_CBAJ_T0028342.1 MGP_CBAJ_G0017915.1 mouse_genomes_project 11 48552381 48555733 + Adam19 protein_coding retained_intron MGP_CBAJ_T0101559.1 MGP_CBAJ_G0039591.1 mouse_genomes_project 11 104139158 104140400 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0033577.1 MGP_CBAJ_G0019202.1 mouse_genomes_project 11 132501762 132633948 + MGP_CBAJ_P0033577 Rnf213 protein_coding unknown_likely_coding MGP_CBAJ_T0033578.1 MGP_CBAJ_G0019202.1 mouse_genomes_project 11 132519335 132635207 + MGP_CBAJ_P0033578 Rnf213 protein_coding protein_coding MGP_CBAJ_T0033579.1 MGP_CBAJ_G0019202.1 mouse_genomes_project 11 132519335 132635204 + MGP_CBAJ_P0033579 Rnf213 protein_coding protein_coding MGP_CBAJ_T0033580.1 MGP_CBAJ_G0019202.1 mouse_genomes_project 11 132625847 132635206 + MGP_CBAJ_P0033580 Rnf213 protein_coding protein_coding MGP_CBAJ_T0031046.1 MGP_CBAJ_G0018605.1 mouse_genomes_project 11 93107606 93162251 - MGP_CBAJ_P0031046 Appbp2 protein_coding protein_coding MGP_CBAJ_T0028503.1 MGP_CBAJ_G0017968.1 mouse_genomes_project 11 53142404 53146309 + 3010026O09Rik protein_coding processed_transcript MGP_CBAJ_T0028504.1 MGP_CBAJ_G0017968.1 mouse_genomes_project 11 53142809 53189213 + MGP_CBAJ_P0028504 3010026O09Rik protein_coding protein_coding MGP_CBAJ_T0028505.1 MGP_CBAJ_G0017968.1 mouse_genomes_project 11 53142867 53186137 + MGP_CBAJ_P0028505 3010026O09Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0028971.1 MGP_CBAJ_G0018109.1 mouse_genomes_project 11 63234386 63241183 - MGP_CBAJ_P0028971 protein_coding protein_coding MGP_CBAJ_T0012443.1 MGP_CBAJ_G0010555.1 mouse_genomes_project 11 53355023 53355285 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016933.1 MGP_CBAJ_G0014910.1 mouse_genomes_project 11 61915755 61931473 - processed_transcript processed_transcript MGP_CBAJ_T0029850.1 MGP_CBAJ_G0018305.1 mouse_genomes_project 11 75950043 75953661 + MGP_CBAJ_P0029850 Asgr1 protein_coding protein_coding MGP_CBAJ_T0029851.1 MGP_CBAJ_G0018305.1 mouse_genomes_project 11 75950313 75953658 + MGP_CBAJ_P0029851 Asgr1 protein_coding protein_coding MGP_CBAJ_T0029852.1 MGP_CBAJ_G0018305.1 mouse_genomes_project 11 75950313 75953661 + MGP_CBAJ_P0029852 Asgr1 protein_coding protein_coding MGP_CBAJ_T0029853.1 MGP_CBAJ_G0018305.1 mouse_genomes_project 11 75950656 75953661 + MGP_CBAJ_P0029853 Asgr1 protein_coding protein_coding MGP_CBAJ_T0029854.1 MGP_CBAJ_G0018305.1 mouse_genomes_project 11 75950858 75953410 + MGP_CBAJ_P0029854 Asgr1 protein_coding unknown_likely_coding MGP_CBAJ_T0029855.1 MGP_CBAJ_G0018305.1 mouse_genomes_project 11 75951837 75953137 + MGP_CBAJ_P0029855 Asgr1 protein_coding protein_coding MGP_CBAJ_T0029395.1 MGP_CBAJ_G0018204.1 mouse_genomes_project 11 70865842 70981912 - MGP_CBAJ_P0029395 Map2k4 protein_coding protein_coding MGP_CBAJ_T0029396.1 MGP_CBAJ_G0018204.1 mouse_genomes_project 11 70867932 70899470 - MGP_CBAJ_P0029396 Map2k4 protein_coding protein_coding MGP_CBAJ_T0029397.1 MGP_CBAJ_G0018204.1 mouse_genomes_project 11 70869327 70874612 - Map2k4 protein_coding processed_transcript MGP_CBAJ_T0029398.1 MGP_CBAJ_G0018204.1 mouse_genomes_project 11 70873885 70981900 - MGP_CBAJ_P0029398 Map2k4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029399.1 MGP_CBAJ_G0018204.1 mouse_genomes_project 11 70892098 70981901 - MGP_CBAJ_P0029399 Map2k4 protein_coding protein_coding MGP_CBAJ_T0029400.1 MGP_CBAJ_G0018204.1 mouse_genomes_project 11 70892099 70981900 - MGP_CBAJ_P0029400 Map2k4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029401.1 MGP_CBAJ_G0018204.1 mouse_genomes_project 11 70899405 70929148 - Map2k4 protein_coding processed_transcript MGP_CBAJ_T0003294.1 MGP_CBAJ_G0003036.1 mouse_genomes_project 11 133960799 133963458 + Notumos antisense antisense MGP_CBAJ_T0028186.1 MGP_CBAJ_G0017875.1 mouse_genomes_project 11 34582480 34641917 - MGP_CBAJ_P0028186 Kcnip1 protein_coding protein_coding MGP_CBAJ_T0028187.1 MGP_CBAJ_G0017875.1 mouse_genomes_project 11 34582488 34846238 - MGP_CBAJ_P0028187 Kcnip1 protein_coding protein_coding MGP_CBAJ_T0028188.1 MGP_CBAJ_G0017875.1 mouse_genomes_project 11 34582488 34846296 - MGP_CBAJ_P0028188 Kcnip1 protein_coding protein_coding MGP_CBAJ_T0028189.1 MGP_CBAJ_G0017875.1 mouse_genomes_project 11 34593878 35015841 - Kcnip1 protein_coding processed_transcript MGP_CBAJ_T0028190.1 MGP_CBAJ_G0017875.1 mouse_genomes_project 11 34594202 35015676 - Kcnip1 protein_coding processed_transcript MGP_CBAJ_T0099895.1 MGP_CBAJ_G0038150.1 mouse_genomes_project 11 933177 933276 + Gm24013 snoRNA snoRNA MGP_CBAJ_T0098695.1 MGP_CBAJ_G0036950.1 mouse_genomes_project 11 74979357 74979462 + Gm23194 snRNA snRNA MGP_CBAJ_T0028467.1 MGP_CBAJ_G0017960.1 mouse_genomes_project 11 52519629 52553306 + Flt4 protein_coding processed_transcript MGP_CBAJ_T0028468.1 MGP_CBAJ_G0017960.1 mouse_genomes_project 11 52534311 52580427 + MGP_CBAJ_P0028468 Flt4 protein_coding unknown_likely_coding MGP_CBAJ_T0028469.1 MGP_CBAJ_G0017960.1 mouse_genomes_project 11 52534311 52580703 + MGP_CBAJ_P0028469 Flt4 protein_coding unknown_likely_coding MGP_CBAJ_T0028470.1 MGP_CBAJ_G0017960.1 mouse_genomes_project 11 52534311 52580604 + MGP_CBAJ_P0028470 Flt4 protein_coding protein_coding MGP_CBAJ_T0032304.1 MGP_CBAJ_G0018942.1 mouse_genomes_project 11 112841042 112845050 + Nags protein_coding processed_transcript MGP_CBAJ_T0032305.1 MGP_CBAJ_G0018942.1 mouse_genomes_project 11 112841078 112845050 + MGP_CBAJ_P0032305 Nags protein_coding protein_coding MGP_CBAJ_T0032306.1 MGP_CBAJ_G0018942.1 mouse_genomes_project 11 112841895 112845050 + Nags protein_coding processed_transcript MGP_CBAJ_T0032127.1 MGP_CBAJ_G0018906.1 mouse_genomes_project 11 111681788 111684235 - MGP_CBAJ_P0032127 Ccr10 protein_coding protein_coding MGP_CBAJ_T0031435.1 MGP_CBAJ_G0018698.1 mouse_genomes_project 11 104301262 104302117 + MGP_CBAJ_P0031435 Hils1 protein_coding protein_coding MGP_CBAJ_T0033537.1 MGP_CBAJ_G0019195.1 mouse_genomes_project 11 132205931 132281052 - MGP_CBAJ_P0033537 Tbc1d16 protein_coding unknown_likely_coding MGP_CBAJ_T0033538.1 MGP_CBAJ_G0019195.1 mouse_genomes_project 11 132205939 132303031 - MGP_CBAJ_P0033538 Tbc1d16 protein_coding protein_coding MGP_CBAJ_T0033539.1 MGP_CBAJ_G0019195.1 mouse_genomes_project 11 132273382 132290471 - MGP_CBAJ_P0033539 Tbc1d16 protein_coding protein_coding MGP_CBAJ_T0032680.1 MGP_CBAJ_G0019018.1 mouse_genomes_project 11 117551176 117588344 + MGP_CBAJ_P0032680 Ddx42 protein_coding protein_coding MGP_CBAJ_T0032681.1 MGP_CBAJ_G0019018.1 mouse_genomes_project 11 117572808 117574029 + Ddx42 protein_coding processed_transcript MGP_CBAJ_T0032564.1 MGP_CBAJ_G0018991.1 mouse_genomes_project 11 114991644 115013123 + MGP_CBAJ_P0032564 Arf2 protein_coding protein_coding MGP_CBAJ_T0032565.1 MGP_CBAJ_G0018991.1 mouse_genomes_project 11 114991776 115013123 + MGP_CBAJ_P0032565 Arf2 protein_coding protein_coding MGP_CBAJ_T0032566.1 MGP_CBAJ_G0018991.1 mouse_genomes_project 11 115000637 115009684 + Arf2 protein_coding retained_intron MGP_CBAJ_T0032567.1 MGP_CBAJ_G0018991.1 mouse_genomes_project 11 115007374 115011413 + MGP_CBAJ_P0032567 Arf2 protein_coding protein_coding MGP_CBAJ_T0029242.1 MGP_CBAJ_G0018170.1 mouse_genomes_project 11 66340538 66367220 + MGP_CBAJ_P0029242 Grap protein_coding protein_coding MGP_CBAJ_T0029243.1 MGP_CBAJ_G0018170.1 mouse_genomes_project 11 66359948 66360783 + Grap protein_coding processed_transcript MGP_CBAJ_T0030290.1 MGP_CBAJ_G0018422.1 mouse_genomes_project 11 81339276 81354962 + MGP_CBAJ_P0030290 Mnt protein_coding protein_coding MGP_CBAJ_T0030291.1 MGP_CBAJ_G0018422.1 mouse_genomes_project 11 81345573 81346971 + Mnt protein_coding retained_intron MGP_CBAJ_T0030292.1 MGP_CBAJ_G0018422.1 mouse_genomes_project 11 81346715 81353012 + MGP_CBAJ_P0030292 Mnt protein_coding protein_coding MGP_CBAJ_T0012591.1 MGP_CBAJ_G0010703.1 mouse_genomes_project 11 116214019 116214708 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0029892.1 MGP_CBAJ_G0018314.1 mouse_genomes_project 11 76167119 76168776 - MGP_CBAJ_P0029892 Rnasek protein_coding nonsense_mediated_decay MGP_CBAJ_T0029893.1 MGP_CBAJ_G0018314.1 mouse_genomes_project 11 76167119 76168838 - MGP_CBAJ_P0029893 Rnasek protein_coding protein_coding MGP_CBAJ_T0029894.1 MGP_CBAJ_G0018314.1 mouse_genomes_project 11 76167122 76168054 - MGP_CBAJ_P0029894 Rnasek protein_coding protein_coding MGP_CBAJ_T0028020.1 MGP_CBAJ_G0017834.1 mouse_genomes_project 11 29645166 29805032 + MGP_CBAJ_P0028020 Ccdc88a protein_coding protein_coding MGP_CBAJ_T0028021.1 MGP_CBAJ_G0017834.1 mouse_genomes_project 11 29645285 29705195 + MGP_CBAJ_P0028021 Ccdc88a protein_coding protein_coding MGP_CBAJ_T0028022.1 MGP_CBAJ_G0017834.1 mouse_genomes_project 11 29745904 29750637 + Ccdc88a protein_coding processed_transcript MGP_CBAJ_T0028023.1 MGP_CBAJ_G0017834.1 mouse_genomes_project 11 29753296 29772527 + MGP_CBAJ_P0028023 Ccdc88a protein_coding protein_coding MGP_CBAJ_T0028024.1 MGP_CBAJ_G0017834.1 mouse_genomes_project 11 29759769 29795541 + MGP_CBAJ_P0028024 Ccdc88a protein_coding protein_coding MGP_CBAJ_T0028025.1 MGP_CBAJ_G0017834.1 mouse_genomes_project 11 29775859 29794953 + MGP_CBAJ_P0028025 Ccdc88a protein_coding protein_coding MGP_CBAJ_T0028026.1 MGP_CBAJ_G0017834.1 mouse_genomes_project 11 29785330 29789287 + Ccdc88a protein_coding processed_transcript MGP_CBAJ_T0017001.1 MGP_CBAJ_G0014950.1 mouse_genomes_project 11 114668534 114673827 + C130046K22Rik processed_transcript processed_transcript MGP_CBAJ_T0017002.1 MGP_CBAJ_G0014950.1 mouse_genomes_project 11 114668534 114693629 + C130046K22Rik processed_transcript processed_transcript MGP_CBAJ_T0031529.1 MGP_CBAJ_G0018724.1 mouse_genomes_project 11 105614496 105627122 - MGP_CBAJ_P0031529 Calcoco2 protein_coding protein_coding MGP_CBAJ_T0031530.1 MGP_CBAJ_G0018724.1 mouse_genomes_project 11 105615032 105627120 - MGP_CBAJ_P0031530 Calcoco2 protein_coding protein_coding MGP_CBAJ_T0006110.1 MGP_CBAJ_G0005097.1 mouse_genomes_project 11 24992906 25143236 + 4933427E13Rik lincRNA lincRNA MGP_CBAJ_T0006112.1 MGP_CBAJ_G0005097.1 mouse_genomes_project 11 25098693 25143240 + 4933427E13Rik lincRNA lincRNA MGP_CBAJ_T0006113.1 MGP_CBAJ_G0005097.1 mouse_genomes_project 11 25098722 25103329 + 4933427E13Rik lincRNA lincRNA MGP_CBAJ_T0006114.1 MGP_CBAJ_G0005097.1 mouse_genomes_project 11 25102567 25134294 + 4933427E13Rik lincRNA lincRNA MGP_CBAJ_T0006117.1 MGP_CBAJ_G0005101.1 mouse_genomes_project 11 29885221 29887107 + Gm12088 lincRNA lincRNA MGP_CBAJ_T0032874.1 MGP_CBAJ_G0019058.1 mouse_genomes_project 11 121489202 121545967 - MGP_CBAJ_P0032874 Fam20a protein_coding nonsense_mediated_decay MGP_CBAJ_T0032875.1 MGP_CBAJ_G0019058.1 mouse_genomes_project 11 121492379 121545944 - MGP_CBAJ_P0032875 Fam20a protein_coding protein_coding MGP_CBAJ_T0032876.1 MGP_CBAJ_G0019058.1 mouse_genomes_project 11 121492927 121495878 - Fam20a protein_coding retained_intron MGP_CBAJ_T0032877.1 MGP_CBAJ_G0019058.1 mouse_genomes_project 11 121494094 121502421 - Fam20a protein_coding retained_intron MGP_CBAJ_T0009625.1 MGP_CBAJ_G0007763.1 mouse_genomes_project 11 108185711 108185768 + Mir5119 miRNA miRNA MGP_CBAJ_T0032256.1 MGP_CBAJ_G0018932.1 mouse_genomes_project 11 112395963 112414148 - MGP_CBAJ_P0032256 Etv4 protein_coding protein_coding MGP_CBAJ_T0032257.1 MGP_CBAJ_G0018932.1 mouse_genomes_project 11 112395968 112414209 - MGP_CBAJ_P0032257 Etv4 protein_coding protein_coding MGP_CBAJ_T0032258.1 MGP_CBAJ_G0018932.1 mouse_genomes_project 11 112395968 112414209 - MGP_CBAJ_P0032258 Etv4 protein_coding protein_coding MGP_CBAJ_T0032259.1 MGP_CBAJ_G0018932.1 mouse_genomes_project 11 112396575 112398401 - Etv4 protein_coding processed_transcript MGP_CBAJ_T0032260.1 MGP_CBAJ_G0018932.1 mouse_genomes_project 11 112399911 112413699 - Etv4 protein_coding processed_transcript MGP_CBAJ_T0032261.1 MGP_CBAJ_G0018932.1 mouse_genomes_project 11 112400050 112414096 - Etv4 protein_coding processed_transcript MGP_CBAJ_T0032262.1 MGP_CBAJ_G0018932.1 mouse_genomes_project 11 112400300 112414060 - Etv4 protein_coding processed_transcript MGP_CBAJ_T0032263.1 MGP_CBAJ_G0018932.1 mouse_genomes_project 11 112400387 112414098 - Etv4 protein_coding processed_transcript MGP_CBAJ_T0032264.1 MGP_CBAJ_G0018932.1 mouse_genomes_project 11 112400387 112410599 - Etv4 protein_coding processed_transcript MGP_CBAJ_T0032265.1 MGP_CBAJ_G0018932.1 mouse_genomes_project 11 112400427 112414148 - Etv4 protein_coding processed_transcript MGP_CBAJ_T0032266.1 MGP_CBAJ_G0018932.1 mouse_genomes_project 11 112410466 112413686 - Etv4 protein_coding processed_transcript MGP_CBAJ_T0028264.1 MGP_CBAJ_G0017895.1 mouse_genomes_project 11 44354019 44592070 + MGP_CBAJ_P0028264 Gabrb2 protein_coding protein_coding MGP_CBAJ_T0028265.1 MGP_CBAJ_G0017895.1 mouse_genomes_project 11 44354026 44356958 + Gabrb2 protein_coding processed_transcript MGP_CBAJ_T0028266.1 MGP_CBAJ_G0017895.1 mouse_genomes_project 11 44355598 44433808 + Gabrb2 protein_coding processed_transcript MGP_CBAJ_T0028267.1 MGP_CBAJ_G0017895.1 mouse_genomes_project 11 44355629 44481851 + Gabrb2 protein_coding processed_transcript MGP_CBAJ_T0028268.1 MGP_CBAJ_G0017895.1 mouse_genomes_project 11 44355669 44589933 + MGP_CBAJ_P0028268 Gabrb2 protein_coding protein_coding MGP_CBAJ_T0031733.1 MGP_CBAJ_G0018774.1 mouse_genomes_project 11 107902361 107903552 + Rpl19 protein_coding retained_intron MGP_CBAJ_T0031734.1 MGP_CBAJ_G0018774.1 mouse_genomes_project 11 107902390 107909004 + MGP_CBAJ_P0031734 Rpl19 protein_coding protein_coding MGP_CBAJ_T0009562.1 MGP_CBAJ_G0007700.1 mouse_genomes_project 11 58432787 58432864 - Gm26116 miRNA miRNA MGP_CBAJ_T0031933.1 MGP_CBAJ_G0018848.1 mouse_genomes_project 11 110170946 110171767 + MGP_CBAJ_P0031933 Gm11567 protein_coding protein_coding MGP_CBAJ_T0012609.1 MGP_CBAJ_G0010721.1 mouse_genomes_project 11 126703827 126704960 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0032298.1 MGP_CBAJ_G0018940.1 mouse_genomes_project 11 112795163 112796553 - MGP_CBAJ_P0032298 Ppy protein_coding protein_coding MGP_CBAJ_T0032299.1 MGP_CBAJ_G0018940.1 mouse_genomes_project 11 112795163 112796544 - MGP_CBAJ_P0032299 Ppy protein_coding protein_coding MGP_CBAJ_T0031688.1 MGP_CBAJ_G0018765.1 mouse_genomes_project 11 107564286 107573483 - Cwc25 protein_coding processed_transcript MGP_CBAJ_T0031689.1 MGP_CBAJ_G0018765.1 mouse_genomes_project 11 107564420 107588483 - MGP_CBAJ_P0031689 Cwc25 protein_coding protein_coding MGP_CBAJ_T0031690.1 MGP_CBAJ_G0018765.1 mouse_genomes_project 11 107566471 107574817 - MGP_CBAJ_P0031690 Cwc25 protein_coding protein_coding MGP_CBAJ_T0031691.1 MGP_CBAJ_G0018765.1 mouse_genomes_project 11 107578177 107588467 - MGP_CBAJ_P0031691 Cwc25 protein_coding protein_coding MGP_CBAJ_T0028680.1 MGP_CBAJ_G0018011.1 mouse_genomes_project 11 55798974 55809559 + 9530068E07Rik protein_coding processed_transcript MGP_CBAJ_T0028681.1 MGP_CBAJ_G0018011.1 mouse_genomes_project 11 55798974 55814037 + MGP_CBAJ_P0028681 9530068E07Rik protein_coding protein_coding MGP_CBAJ_T0028682.1 MGP_CBAJ_G0018011.1 mouse_genomes_project 11 55798974 55814042 + MGP_CBAJ_P0028682 9530068E07Rik protein_coding protein_coding MGP_CBAJ_T0028683.1 MGP_CBAJ_G0018011.1 mouse_genomes_project 11 55799192 55808591 + 9530068E07Rik protein_coding processed_transcript MGP_CBAJ_T0003287.1 MGP_CBAJ_G0003033.1 mouse_genomes_project 11 133775861 133778851 - Gm11788 antisense antisense MGP_CBAJ_T0099901.1 MGP_CBAJ_G0038156.1 mouse_genomes_project 11 4294671 4294807 - Snora5c snoRNA snoRNA MGP_CBAJ_T0032571.1 MGP_CBAJ_G0018994.1 mouse_genomes_project 11 115285921 115401940 + MGP_CBAJ_P0032571 protein_coding protein_coding MGP_CBAJ_T0032572.1 MGP_CBAJ_G0018994.1 mouse_genomes_project 11 115286010 115357642 + protein_coding retained_intron MGP_CBAJ_T0032573.1 MGP_CBAJ_G0018994.1 mouse_genomes_project 11 115286015 115368755 + MGP_CBAJ_P0032573 protein_coding protein_coding MGP_CBAJ_T0032574.1 MGP_CBAJ_G0018994.1 mouse_genomes_project 11 115286046 115398287 + MGP_CBAJ_P0032574 protein_coding protein_coding MGP_CBAJ_T0032575.1 MGP_CBAJ_G0018994.1 mouse_genomes_project 11 115286104 115368839 + MGP_CBAJ_P0032575 protein_coding protein_coding MGP_CBAJ_T0032576.1 MGP_CBAJ_G0018994.1 mouse_genomes_project 11 115286110 115368815 + protein_coding processed_transcript MGP_CBAJ_T0032577.1 MGP_CBAJ_G0018994.1 mouse_genomes_project 11 115286112 115357249 + MGP_CBAJ_P0032577 protein_coding protein_coding MGP_CBAJ_T0032578.1 MGP_CBAJ_G0018994.1 mouse_genomes_project 11 115286115 115398071 + MGP_CBAJ_P0032578 protein_coding protein_coding MGP_CBAJ_T0032579.1 MGP_CBAJ_G0018994.1 mouse_genomes_project 11 115341887 115398039 + MGP_CBAJ_P0032579 protein_coding protein_coding MGP_CBAJ_T0032580.1 MGP_CBAJ_G0018994.1 mouse_genomes_project 11 115341887 115398039 + MGP_CBAJ_P0032580 protein_coding protein_coding MGP_CBAJ_T0032581.1 MGP_CBAJ_G0018994.1 mouse_genomes_project 11 115386418 115398093 + protein_coding processed_transcript MGP_CBAJ_T0032582.1 MGP_CBAJ_G0018994.1 mouse_genomes_project 11 115390351 115398062 + protein_coding processed_transcript MGP_CBAJ_T0030322.1 MGP_CBAJ_G0018429.1 mouse_genomes_project 11 81721262 81736426 - MGP_CBAJ_P0030322 Dph1 protein_coding protein_coding MGP_CBAJ_T0030323.1 MGP_CBAJ_G0018429.1 mouse_genomes_project 11 81721315 81726924 - Dph1 protein_coding retained_intron MGP_CBAJ_T0030325.1 MGP_CBAJ_G0018429.1 mouse_genomes_project 11 81721915 81724925 - Dph1 protein_coding processed_transcript MGP_CBAJ_T0030326.1 MGP_CBAJ_G0018429.1 mouse_genomes_project 11 81722808 81727116 - Dph1 protein_coding processed_transcript MGP_CBAJ_T0030327.1 MGP_CBAJ_G0018429.1 mouse_genomes_project 11 81724437 81737148 - MGP_CBAJ_P0030327 Dph1 protein_coding protein_coding MGP_CBAJ_T0030181.1 MGP_CBAJ_G0018375.1 mouse_genomes_project 11 79308681 79359527 + MGP_CBAJ_P0030181 Ncbp3 protein_coding protein_coding MGP_CBAJ_T0030182.1 MGP_CBAJ_G0018375.1 mouse_genomes_project 11 79308768 79322169 + Ncbp3 protein_coding retained_intron MGP_CBAJ_T0030183.1 MGP_CBAJ_G0018375.1 mouse_genomes_project 11 79308771 79320200 + Ncbp3 protein_coding retained_intron MGP_CBAJ_T0027486.1 MGP_CBAJ_G0017712.1 mouse_genomes_project 11 1768029 1899510 - MGP_CBAJ_P0027486 Mtmr3 protein_coding protein_coding MGP_CBAJ_T0027487.1 MGP_CBAJ_G0017712.1 mouse_genomes_project 11 1768036 1775528 - Mtmr3 protein_coding processed_transcript MGP_CBAJ_T0027488.1 MGP_CBAJ_G0017712.1 mouse_genomes_project 11 1768036 1843901 - MGP_CBAJ_P0027488 Mtmr3 protein_coding protein_coding MGP_CBAJ_T0027489.1 MGP_CBAJ_G0017712.1 mouse_genomes_project 11 1768051 1825606 - MGP_CBAJ_P0027489 Mtmr3 protein_coding protein_coding MGP_CBAJ_T0027490.1 MGP_CBAJ_G0017712.1 mouse_genomes_project 11 1769720 1899558 - MGP_CBAJ_P0027490 Mtmr3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027491.1 MGP_CBAJ_G0017712.1 mouse_genomes_project 11 1769913 1825606 - MGP_CBAJ_P0027491 Mtmr3 protein_coding protein_coding MGP_CBAJ_T0027492.1 MGP_CBAJ_G0017712.1 mouse_genomes_project 11 1778968 1780480 - Mtmr3 protein_coding processed_transcript MGP_CBAJ_T0012429.1 MGP_CBAJ_G0010541.1 mouse_genomes_project 11 46714114 46715117 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0032153.1 MGP_CBAJ_G0018910.1 mouse_genomes_project 11 111785215 111810605 + MGP_CBAJ_P0032153 Wnk4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032154.1 MGP_CBAJ_G0018910.1 mouse_genomes_project 11 111785246 111810605 + MGP_CBAJ_P0032154 Wnk4 protein_coding protein_coding MGP_CBAJ_T0032155.1 MGP_CBAJ_G0018910.1 mouse_genomes_project 11 111785303 111810470 + MGP_CBAJ_P0032155 Wnk4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032156.1 MGP_CBAJ_G0018910.1 mouse_genomes_project 11 111794732 111807325 + MGP_CBAJ_P0032156 Wnk4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032157.1 MGP_CBAJ_G0018910.1 mouse_genomes_project 11 111809841 111810602 + MGP_CBAJ_P0032157 Wnk4 protein_coding protein_coding MGP_CBAJ_T0033494.1 MGP_CBAJ_G0019186.1 mouse_genomes_project 11 131392480 131397883 - MGP_CBAJ_P0033494 Lgals3bp protein_coding protein_coding MGP_CBAJ_T0033495.1 MGP_CBAJ_G0019186.1 mouse_genomes_project 11 131392480 131401820 - MGP_CBAJ_P0033495 Lgals3bp protein_coding protein_coding MGP_CBAJ_T0033496.1 MGP_CBAJ_G0019186.1 mouse_genomes_project 11 131396336 131401580 - MGP_CBAJ_P0033496 Lgals3bp protein_coding protein_coding MGP_CBAJ_T0033497.1 MGP_CBAJ_G0019186.1 mouse_genomes_project 11 131396538 131401600 - Lgals3bp protein_coding processed_transcript MGP_CBAJ_T0033498.1 MGP_CBAJ_G0019186.1 mouse_genomes_project 11 131399487 131400765 - MGP_CBAJ_P0033498 Lgals3bp protein_coding protein_coding MGP_CBAJ_T0028948.1 MGP_CBAJ_G0018094.1 mouse_genomes_project 11 62957059 62958204 + MGP_CBAJ_P0028948 protein_coding protein_coding MGP_CBAJ_T0027748.1 MGP_CBAJ_G0017774.1 mouse_genomes_project 11 9952468 9979579 + MGP_CBAJ_P0027748 Ikzf1 protein_coding protein_coding MGP_CBAJ_T0027749.1 MGP_CBAJ_G0017774.1 mouse_genomes_project 11 9952468 10027712 + MGP_CBAJ_P0027749 Ikzf1 protein_coding protein_coding MGP_CBAJ_T0027750.1 MGP_CBAJ_G0017774.1 mouse_genomes_project 11 9953387 10045553 + MGP_CBAJ_P0027750 Ikzf1 protein_coding protein_coding MGP_CBAJ_T0027751.1 MGP_CBAJ_G0017774.1 mouse_genomes_project 11 9953675 10046366 + MGP_CBAJ_P0027751 Ikzf1 protein_coding protein_coding MGP_CBAJ_T0027752.1 MGP_CBAJ_G0017774.1 mouse_genomes_project 11 9953691 10035055 + MGP_CBAJ_P0027752 Ikzf1 protein_coding protein_coding MGP_CBAJ_T0027753.1 MGP_CBAJ_G0017774.1 mouse_genomes_project 11 9953907 10043240 + MGP_CBAJ_P0027753 Ikzf1 protein_coding protein_coding MGP_CBAJ_T0033340.1 MGP_CBAJ_G0019151.1 mouse_genomes_project 11 129283783 129290061 - Ube2o protein_coding processed_transcript MGP_CBAJ_T0033341.1 MGP_CBAJ_G0019151.1 mouse_genomes_project 11 129283783 129327537 - MGP_CBAJ_P0033341 Ube2o protein_coding protein_coding MGP_CBAJ_T0033342.1 MGP_CBAJ_G0019151.1 mouse_genomes_project 11 129291841 129294941 - Ube2o protein_coding processed_transcript MGP_CBAJ_T0028527.1 MGP_CBAJ_G0017974.1 mouse_genomes_project 11 53360166 53365404 + MGP_CBAJ_P0028527 Cby3 protein_coding protein_coding MGP_CBAJ_T0028528.1 MGP_CBAJ_G0017974.1 mouse_genomes_project 11 53363465 53365404 + MGP_CBAJ_P0028528 Cby3 protein_coding protein_coding MGP_CBAJ_T0027607.1 MGP_CBAJ_G0017738.1 mouse_genomes_project 11 3392216 3402358 + MGP_CBAJ_P0027607 Aebp1 protein_coding protein_coding MGP_CBAJ_T0027608.1 MGP_CBAJ_G0017738.1 mouse_genomes_project 11 3392421 3402363 + MGP_CBAJ_P0027608 Aebp1 protein_coding unknown_likely_coding MGP_CBAJ_T0027609.1 MGP_CBAJ_G0017738.1 mouse_genomes_project 11 3397871 3402358 + MGP_CBAJ_P0027609 Aebp1 protein_coding protein_coding MGP_CBAJ_T0027610.1 MGP_CBAJ_G0017738.1 mouse_genomes_project 11 3399417 3400411 + Aebp1 protein_coding processed_transcript MGP_CBAJ_T0097901.1 MGP_CBAJ_G0036174.1 mouse_genomes_project 11 23236720 23236837 - Gm23114 rRNA rRNA MGP_CBAJ_T0028001.1 MGP_CBAJ_G0017830.1 mouse_genomes_project 11 29092082 29171155 + MGP_CBAJ_P0028001 Efemp1 protein_coding protein_coding MGP_CBAJ_T0028002.1 MGP_CBAJ_G0017830.1 mouse_genomes_project 11 29092122 29165938 + Efemp1 protein_coding processed_transcript MGP_CBAJ_T0028003.1 MGP_CBAJ_G0017830.1 mouse_genomes_project 11 29160096 29171155 + MGP_CBAJ_P0028003 Efemp1 protein_coding protein_coding MGP_CBAJ_T0033568.1 MGP_CBAJ_G0019200.1 mouse_genomes_project 11 132452153 132464355 - MGP_CBAJ_P0033568 Sgsh protein_coding nonsense_mediated_decay MGP_CBAJ_T0033569.1 MGP_CBAJ_G0019200.1 mouse_genomes_project 11 132454976 132464383 - Sgsh protein_coding processed_transcript MGP_CBAJ_T0033570.1 MGP_CBAJ_G0019200.1 mouse_genomes_project 11 132455012 132464362 - MGP_CBAJ_P0033570 Sgsh protein_coding protein_coding MGP_CBAJ_T0033571.1 MGP_CBAJ_G0019200.1 mouse_genomes_project 11 132455152 132456596 - Sgsh protein_coding processed_transcript MGP_CBAJ_T0033572.1 MGP_CBAJ_G0019200.1 mouse_genomes_project 11 132455533 132461659 - Sgsh protein_coding processed_transcript MGP_CBAJ_T0006176.1 MGP_CBAJ_G0005153.1 mouse_genomes_project 11 76770724 76778708 - Gm12320 lincRNA lincRNA MGP_CBAJ_T0030122.1 MGP_CBAJ_G0018362.1 mouse_genomes_project 11 78494210 78520824 - MGP_CBAJ_P0030122 Tekt1 protein_coding protein_coding MGP_CBAJ_T0030123.1 MGP_CBAJ_G0018362.1 mouse_genomes_project 11 78494210 78520247 - MGP_CBAJ_P0030123 Tekt1 protein_coding protein_coding MGP_CBAJ_T0030124.1 MGP_CBAJ_G0018362.1 mouse_genomes_project 11 78494217 78521393 - MGP_CBAJ_P0030124 Tekt1 protein_coding protein_coding MGP_CBAJ_T0099958.1 MGP_CBAJ_G0038213.1 mouse_genomes_project 11 109134518 109134640 - Gm23451 snoRNA snoRNA MGP_CBAJ_T0016964.1 MGP_CBAJ_G0014929.1 mouse_genomes_project 11 90985484 90988398 + AA465934 processed_transcript antisense MGP_CBAJ_T0016965.1 MGP_CBAJ_G0014929.1 mouse_genomes_project 11 90985505 90988399 + AA465934 processed_transcript antisense MGP_CBAJ_T0016966.1 MGP_CBAJ_G0014929.1 mouse_genomes_project 11 90985513 90986064 + AA465934 processed_transcript retained_intron MGP_CBAJ_T0016967.1 MGP_CBAJ_G0014929.1 mouse_genomes_project 11 90985527 90988396 + AA465934 processed_transcript antisense MGP_CBAJ_T0016968.1 MGP_CBAJ_G0014929.1 mouse_genomes_project 11 90985528 90988397 + AA465934 processed_transcript retained_intron MGP_CBAJ_T0011178.1 MGP_CBAJ_G0009316.1 mouse_genomes_project 11 72797253 72797563 + Gm26476 misc_RNA misc_RNA MGP_CBAJ_T0101558.1 MGP_CBAJ_G0039590.1 mouse_genomes_project 11 104114659 104115377 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0101266.1 MGP_CBAJ_G0039395.1 mouse_genomes_project 11 90615295 90625702 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0006215.1 MGP_CBAJ_G0005181.1 mouse_genomes_project 11 96398021 96411490 + Gm15892 lincRNA lincRNA MGP_CBAJ_T0006216.1 MGP_CBAJ_G0005181.1 mouse_genomes_project 11 96410375 96411038 + Gm15892 lincRNA lincRNA MGP_CBAJ_T0006217.1 MGP_CBAJ_G0005181.1 mouse_genomes_project 11 96410435 96411466 + Gm15892 lincRNA lincRNA MGP_CBAJ_T0006181.1 MGP_CBAJ_G0005157.1 mouse_genomes_project 11 77730844 77742234 - Gm12324 lincRNA lincRNA MGP_CBAJ_T0012567.1 MGP_CBAJ_G0010679.1 mouse_genomes_project 11 106793333 106793727 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0029280.1 MGP_CBAJ_G0018178.1 mouse_genomes_project 11 67033239 67048308 - MGP_CBAJ_P0029280 Zswim7 protein_coding protein_coding MGP_CBAJ_T0012352.1 MGP_CBAJ_G0010464.1 mouse_genomes_project 11 17114943 17115475 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0027839.1 MGP_CBAJ_G0017794.1 mouse_genomes_project 11 19353179 19375775 - MGP_CBAJ_P0027839 Cep68 protein_coding protein_coding MGP_CBAJ_T0027840.1 MGP_CBAJ_G0017794.1 mouse_genomes_project 11 19364884 19375864 - MGP_CBAJ_P0027840 Cep68 protein_coding protein_coding MGP_CBAJ_T0027841.1 MGP_CBAJ_G0017794.1 mouse_genomes_project 11 19368030 19375829 - Cep68 protein_coding retained_intron MGP_CBAJ_T0029559.1 MGP_CBAJ_G0018241.1 mouse_genomes_project 11 74766021 74772039 + MGP_CBAJ_P0029559 Aurkb protein_coding protein_coding MGP_CBAJ_T0029560.1 MGP_CBAJ_G0018241.1 mouse_genomes_project 11 74766026 74772039 + MGP_CBAJ_P0029560 Aurkb protein_coding protein_coding MGP_CBAJ_T0029561.1 MGP_CBAJ_G0018241.1 mouse_genomes_project 11 74766045 74768593 + Aurkb protein_coding processed_transcript MGP_CBAJ_T0029562.1 MGP_CBAJ_G0018241.1 mouse_genomes_project 11 74766064 74768671 + Aurkb protein_coding retained_intron MGP_CBAJ_T0029563.1 MGP_CBAJ_G0018241.1 mouse_genomes_project 11 74768351 74769448 + Aurkb protein_coding retained_intron MGP_CBAJ_T0029564.1 MGP_CBAJ_G0018241.1 mouse_genomes_project 11 74768902 74769450 + Aurkb protein_coding retained_intron MGP_CBAJ_T0029565.1 MGP_CBAJ_G0018241.1 mouse_genomes_project 11 74768943 74771112 + Aurkb protein_coding retained_intron MGP_CBAJ_T0029566.1 MGP_CBAJ_G0018241.1 mouse_genomes_project 11 74770937 74771514 + Aurkb protein_coding processed_transcript MGP_CBAJ_T0027710.1 MGP_CBAJ_G0017762.1 mouse_genomes_project 11 4978093 4982810 + MGP_CBAJ_P0027710 Igfbp1 protein_coding protein_coding MGP_CBAJ_T0030245.1 MGP_CBAJ_G0018405.1 mouse_genomes_project 11 80356473 80363493 - MGP_CBAJ_P0030245 Olfr398 protein_coding protein_coding MGP_CBAJ_T0030246.1 MGP_CBAJ_G0018405.1 mouse_genomes_project 11 80356473 80357418 - MGP_CBAJ_P0030246 Olfr398 protein_coding protein_coding MGP_CBAJ_T0028646.1 MGP_CBAJ_G0018005.1 mouse_genomes_project 11 55298161 55318436 - MGP_CBAJ_P0028646 Ube2b protein_coding protein_coding MGP_CBAJ_T0028647.1 MGP_CBAJ_G0018005.1 mouse_genomes_project 11 55299331 55318714 - MGP_CBAJ_P0028647 Ube2b protein_coding protein_coding MGP_CBAJ_T0028648.1 MGP_CBAJ_G0018005.1 mouse_genomes_project 11 55315527 55318431 - Ube2b protein_coding processed_transcript MGP_CBAJ_T0028649.1 MGP_CBAJ_G0018005.1 mouse_genomes_project 11 55315603 55318714 - Ube2b protein_coding processed_transcript MGP_CBAJ_T0028810.1 MGP_CBAJ_G0018044.1 mouse_genomes_project 11 58499964 58574562 - MGP_CBAJ_P0028810 Cdc42se2 protein_coding protein_coding MGP_CBAJ_T0028811.1 MGP_CBAJ_G0018044.1 mouse_genomes_project 11 58506082 58574533 - MGP_CBAJ_P0028811 Cdc42se2 protein_coding protein_coding MGP_CBAJ_T0028812.1 MGP_CBAJ_G0018044.1 mouse_genomes_project 11 58522735 58574528 - Cdc42se2 protein_coding processed_transcript MGP_CBAJ_T0028813.1 MGP_CBAJ_G0018044.1 mouse_genomes_project 11 58523059 58574512 - Cdc42se2 protein_coding processed_transcript MGP_CBAJ_T0028814.1 MGP_CBAJ_G0018044.1 mouse_genomes_project 11 58523194 58543648 - Cdc42se2 protein_coding processed_transcript MGP_CBAJ_T0030431.1 MGP_CBAJ_G0018452.1 mouse_genomes_project 11 82895976 82939131 + Fam57a protein_coding processed_transcript MGP_CBAJ_T0030432.1 MGP_CBAJ_G0018452.1 mouse_genomes_project 11 82921264 82922226 + Fam57a protein_coding retained_intron MGP_CBAJ_T0030433.1 MGP_CBAJ_G0018452.1 mouse_genomes_project 11 82921301 82931057 + MGP_CBAJ_P0030433 Fam57a protein_coding protein_coding MGP_CBAJ_T0030434.1 MGP_CBAJ_G0018452.1 mouse_genomes_project 11 82921334 82931205 + MGP_CBAJ_P0030434 Fam57a protein_coding protein_coding MGP_CBAJ_T0009595.1 MGP_CBAJ_G0007733.1 mouse_genomes_project 11 82048619 82048714 + Mir22 miRNA miRNA MGP_CBAJ_T0029716.1 MGP_CBAJ_G0018277.1 mouse_genomes_project 11 75567897 75596235 - MGP_CBAJ_P0029716 Polr2a protein_coding protein_coding MGP_CBAJ_T0029717.1 MGP_CBAJ_G0018277.1 mouse_genomes_project 11 75568310 75595821 - MGP_CBAJ_P0029717 Polr2a protein_coding protein_coding MGP_CBAJ_T0029718.1 MGP_CBAJ_G0018277.1 mouse_genomes_project 11 75570111 75571249 - Polr2a protein_coding processed_transcript MGP_CBAJ_T0029719.1 MGP_CBAJ_G0018277.1 mouse_genomes_project 11 75575524 75576471 - Polr2a protein_coding processed_transcript MGP_CBAJ_T0016928.1 MGP_CBAJ_G0014906.1 mouse_genomes_project 11 48169795 48209940 + F630206G17Rik processed_transcript processed_transcript MGP_CBAJ_T0028185.1 MGP_CBAJ_G0017874.1 mouse_genomes_project 11 34550152 34578317 + MGP_CBAJ_P0028185 D130052B06Rik protein_coding protein_coding MGP_CBAJ_T0031807.1 MGP_CBAJ_G0018793.1 mouse_genomes_project 11 108694974 108720605 + MGP_CBAJ_P0031807 Gsdma protein_coding protein_coding MGP_CBAJ_T0012321.1 MGP_CBAJ_G0010433.1 mouse_genomes_project 11 4080103 4081346 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012599.1 MGP_CBAJ_G0010711.1 mouse_genomes_project 11 118854543 118854894 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0030602.1 MGP_CBAJ_G0018487.1 mouse_genomes_project 11 85171012 85178103 - Traf4 protein_coding retained_intron MGP_CBAJ_T0030603.1 MGP_CBAJ_G0018487.1 mouse_genomes_project 11 85171913 85178103 - MGP_CBAJ_P0030603 Traf4 protein_coding protein_coding MGP_CBAJ_T0030604.1 MGP_CBAJ_G0018487.1 mouse_genomes_project 11 85173306 85178030 - Traf4 protein_coding retained_intron MGP_CBAJ_T0003139.1 MGP_CBAJ_G0002913.1 mouse_genomes_project 11 72612900 72647955 - Gm12300 antisense antisense MGP_CBAJ_T0003140.1 MGP_CBAJ_G0002913.1 mouse_genomes_project 11 72630548 72635581 - Gm12300 antisense antisense MGP_CBAJ_T0003141.1 MGP_CBAJ_G0002913.1 mouse_genomes_project 11 72630865 72647663 - Gm12300 antisense antisense MGP_CBAJ_T0027665.1 MGP_CBAJ_G0017751.1 mouse_genomes_project 11 4041058 4045356 + MGP_CBAJ_P0027665 Ppia protein_coding protein_coding MGP_CBAJ_T0027666.1 MGP_CBAJ_G0017751.1 mouse_genomes_project 11 4041483 4044165 + Ppia protein_coding retained_intron MGP_CBAJ_T0027667.1 MGP_CBAJ_G0017751.1 mouse_genomes_project 11 4041491 4049203 + Ppia protein_coding retained_intron MGP_CBAJ_T0031212.1 MGP_CBAJ_G0018644.1 mouse_genomes_project 11 96282079 96289119 - MGP_CBAJ_P0031212 Dynll2 protein_coding protein_coding MGP_CBAJ_T0031213.1 MGP_CBAJ_G0018644.1 mouse_genomes_project 11 96282080 96290067 - MGP_CBAJ_P0031213 Dynll2 protein_coding protein_coding MGP_CBAJ_T0031214.1 MGP_CBAJ_G0018644.1 mouse_genomes_project 11 96282080 96286561 - MGP_CBAJ_P0031214 Dynll2 protein_coding protein_coding MGP_CBAJ_T0031215.1 MGP_CBAJ_G0018644.1 mouse_genomes_project 11 96282712 96289890 - MGP_CBAJ_P0031215 Dynll2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012452.1 MGP_CBAJ_G0010564.1 mouse_genomes_project 11 57345643 57345996 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0030840.1 MGP_CBAJ_G0018547.1 mouse_genomes_project 11 89552724 89554538 + MGP_CBAJ_P0030840 Ccl7 protein_coding protein_coding MGP_CBAJ_T0030898.1 MGP_CBAJ_G0018566.1 mouse_genomes_project 11 90854602 90876136 + MGP_CBAJ_P0030898 Slfn4 protein_coding protein_coding MGP_CBAJ_T0030899.1 MGP_CBAJ_G0018566.1 mouse_genomes_project 11 90854610 90875964 + MGP_CBAJ_P0030899 Slfn4 protein_coding protein_coding MGP_CBAJ_T0031485.1 MGP_CBAJ_G0018710.1 mouse_genomes_project 11 104903743 104912220 - MGP_CBAJ_P0031485 Nxph3 protein_coding protein_coding MGP_CBAJ_T0031835.1 MGP_CBAJ_G0018798.1 mouse_genomes_project 11 108820327 108827729 - MGP_CBAJ_P0031835 Nr1d1 protein_coding protein_coding MGP_CBAJ_T0031836.1 MGP_CBAJ_G0018798.1 mouse_genomes_project 11 108821742 108822822 - Nr1d1 protein_coding processed_transcript MGP_CBAJ_T0101550.1 MGP_CBAJ_G0039582.1 mouse_genomes_project 11 82841632 82842211 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0006243.1 MGP_CBAJ_G0005199.1 mouse_genomes_project 11 110455812 110462158 - Gm12347 lincRNA lincRNA MGP_CBAJ_T0099935.1 MGP_CBAJ_G0038190.1 mouse_genomes_project 11 75485156 75485300 - Gm22988 snoRNA snoRNA MGP_CBAJ_T0028166.1 MGP_CBAJ_G0017867.1 mouse_genomes_project 11 33608057 33615904 - MGP_CBAJ_P0028166 Smim23 protein_coding protein_coding MGP_CBAJ_T0028167.1 MGP_CBAJ_G0017867.1 mouse_genomes_project 11 33609901 33615947 - MGP_CBAJ_P0028167 Smim23 protein_coding protein_coding MGP_CBAJ_T0099922.1 MGP_CBAJ_G0038177.1 mouse_genomes_project 11 51524706 51524774 + Snord95 snoRNA snoRNA MGP_CBAJ_T0003116.1 MGP_CBAJ_G0002893.1 mouse_genomes_project 11 64740065 64741186 + Gm12265 antisense antisense MGP_CBAJ_T0031232.1 MGP_CBAJ_G0018648.1 mouse_genomes_project 11 96564634 96572959 + MGP_CBAJ_P0031232 Mrps23 protein_coding protein_coding MGP_CBAJ_T0031233.1 MGP_CBAJ_G0018648.1 mouse_genomes_project 11 96564657 96572959 + MGP_CBAJ_P0031233 Mrps23 protein_coding protein_coding MGP_CBAJ_T0031234.1 MGP_CBAJ_G0018648.1 mouse_genomes_project 11 96564670 96572132 + MGP_CBAJ_P0031234 Mrps23 protein_coding protein_coding MGP_CBAJ_T0031235.1 MGP_CBAJ_G0018648.1 mouse_genomes_project 11 96564670 96571671 + MGP_CBAJ_P0031235 Mrps23 protein_coding protein_coding MGP_CBAJ_T0031236.1 MGP_CBAJ_G0018648.1 mouse_genomes_project 11 96564690 96572433 + MGP_CBAJ_P0031236 Mrps23 protein_coding protein_coding MGP_CBAJ_T0017028.1 MGP_CBAJ_G0014959.1 mouse_genomes_project 11 130313832 130331061 + Gm11732 processed_transcript processed_transcript MGP_CBAJ_T0029830.1 MGP_CBAJ_G0018303.1 mouse_genomes_project 11 75886155 75891381 - MGP_CBAJ_P0029830 Acadvl protein_coding protein_coding MGP_CBAJ_T0029831.1 MGP_CBAJ_G0018303.1 mouse_genomes_project 11 75886161 75886884 - Acadvl protein_coding retained_intron MGP_CBAJ_T0029832.1 MGP_CBAJ_G0018303.1 mouse_genomes_project 11 75886216 75891360 - MGP_CBAJ_P0029832 Acadvl protein_coding protein_coding MGP_CBAJ_T0029833.1 MGP_CBAJ_G0018303.1 mouse_genomes_project 11 75887194 75888547 - Acadvl protein_coding retained_intron MGP_CBAJ_T0029834.1 MGP_CBAJ_G0018303.1 mouse_genomes_project 11 75889161 75891350 - Acadvl protein_coding retained_intron MGP_CBAJ_T0029835.1 MGP_CBAJ_G0018303.1 mouse_genomes_project 11 75890015 75891384 - Acadvl protein_coding retained_intron MGP_CBAJ_T0029836.1 MGP_CBAJ_G0018303.1 mouse_genomes_project 11 75890090 75891372 - Acadvl protein_coding retained_intron MGP_CBAJ_T0032351.1 MGP_CBAJ_G0018950.1 mouse_genomes_project 11 113005028 113011386 - MGP_CBAJ_P0032351 Atxn7l3 protein_coding unknown_likely_coding MGP_CBAJ_T0032352.1 MGP_CBAJ_G0018950.1 mouse_genomes_project 11 113005032 113009177 - Atxn7l3 protein_coding retained_intron MGP_CBAJ_T0032353.1 MGP_CBAJ_G0018950.1 mouse_genomes_project 11 113005032 113010720 - MGP_CBAJ_P0032353 Atxn7l3 protein_coding protein_coding MGP_CBAJ_T0032354.1 MGP_CBAJ_G0018950.1 mouse_genomes_project 11 113005032 113009896 - MGP_CBAJ_P0032354 Atxn7l3 protein_coding protein_coding MGP_CBAJ_T0032355.1 MGP_CBAJ_G0018950.1 mouse_genomes_project 11 113005033 113015773 - MGP_CBAJ_P0032355 Atxn7l3 protein_coding protein_coding MGP_CBAJ_T0030720.1 MGP_CBAJ_G0018517.1 mouse_genomes_project 11 86074905 86097062 - MGP_CBAJ_P0030720 Lgals9 protein_coding protein_coding MGP_CBAJ_T0030721.1 MGP_CBAJ_G0018517.1 mouse_genomes_project 11 86074910 86097040 - MGP_CBAJ_P0030721 Lgals9 protein_coding protein_coding MGP_CBAJ_T0030722.1 MGP_CBAJ_G0018517.1 mouse_genomes_project 11 86075326 86096947 - MGP_CBAJ_P0030722 Lgals9 protein_coding protein_coding MGP_CBAJ_T0030723.1 MGP_CBAJ_G0018517.1 mouse_genomes_project 11 86078812 86082341 - Lgals9 protein_coding retained_intron MGP_CBAJ_T0011668.1 MGP_CBAJ_G0009803.1 mouse_genomes_project 11 64019458 64021362 + MGP_CBAJ_P0011668 polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0033420.1 MGP_CBAJ_G0019167.1 mouse_genomes_project 11 130383184 130387828 + MGP_CBAJ_P0033420 Gm11733 protein_coding protein_coding MGP_CBAJ_T0031201.1 MGP_CBAJ_G0018639.1 mouse_genomes_project 11 96096199 96106818 + MGP_CBAJ_P0031201 Mks1 protein_coding protein_coding MGP_CBAJ_T0031202.1 MGP_CBAJ_G0018639.1 mouse_genomes_project 11 96096211 96102323 + Mks1 protein_coding retained_intron MGP_CBAJ_T0031203.1 MGP_CBAJ_G0018639.1 mouse_genomes_project 11 96096659 96102323 + Mks1 protein_coding retained_intron MGP_CBAJ_T0031204.1 MGP_CBAJ_G0018639.1 mouse_genomes_project 11 96099561 96100296 + Mks1 protein_coding retained_intron MGP_CBAJ_T0031205.1 MGP_CBAJ_G0018639.1 mouse_genomes_project 11 96104948 96106276 + Mks1 protein_coding retained_intron MGP_CBAJ_T0033778.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 133974615 133975992 + Aspscr1 protein_coding retained_intron MGP_CBAJ_T0033779.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 133974668 133980592 + Aspscr1 protein_coding retained_intron MGP_CBAJ_T0033780.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 133974705 134006156 + MGP_CBAJ_P0033780 Aspscr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033781.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 133974711 134016163 + MGP_CBAJ_P0033781 Aspscr1 protein_coding protein_coding MGP_CBAJ_T0033782.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 133974725 134015785 + MGP_CBAJ_P0033782 Aspscr1 protein_coding protein_coding MGP_CBAJ_T0033783.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 133974740 133993678 + MGP_CBAJ_P0033783 Aspscr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033784.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 133975001 133993781 + MGP_CBAJ_P0033784 Aspscr1 protein_coding protein_coding MGP_CBAJ_T0033785.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 133975016 133993777 + MGP_CBAJ_P0033785 Aspscr1 protein_coding protein_coding MGP_CBAJ_T0033786.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 133975016 133983063 + MGP_CBAJ_P0033786 Aspscr1 protein_coding protein_coding MGP_CBAJ_T0033787.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 133975034 133993737 + MGP_CBAJ_P0033787 Aspscr1 protein_coding protein_coding MGP_CBAJ_T0033788.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 133975046 133991311 + MGP_CBAJ_P0033788 Aspscr1 protein_coding protein_coding MGP_CBAJ_T0033789.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 133981270 134016155 + MGP_CBAJ_P0033789 Aspscr1 protein_coding protein_coding MGP_CBAJ_T0033790.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 133981835 133983055 + MGP_CBAJ_P0033790 Aspscr1 protein_coding protein_coding MGP_CBAJ_T0033791.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 133981948 133993907 + MGP_CBAJ_P0033791 Aspscr1 protein_coding protein_coding MGP_CBAJ_T0033792.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 133991302 134016156 + MGP_CBAJ_P0033792 Aspscr1 protein_coding protein_coding MGP_CBAJ_T0033793.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 133993883 134016156 + MGP_CBAJ_P0033793 Aspscr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033794.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 133993919 134015954 + MGP_CBAJ_P0033794 Aspscr1 protein_coding protein_coding MGP_CBAJ_T0033795.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 134007105 134016157 + MGP_CBAJ_P0033795 Aspscr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033796.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 134015370 134016155 + Aspscr1 protein_coding retained_intron MGP_CBAJ_T0033797.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 134015472 134016160 + Aspscr1 protein_coding retained_intron MGP_CBAJ_T0033798.1 MGP_CBAJ_G0019241.1 mouse_genomes_project 11 134015570 134016158 + Aspscr1 protein_coding retained_intron MGP_CBAJ_T0016916.1 MGP_CBAJ_G0014899.1 mouse_genomes_project 11 23100413 23101307 + 1700030C12Rik processed_transcript processed_transcript MGP_CBAJ_T0016917.1 MGP_CBAJ_G0014899.1 mouse_genomes_project 11 23100417 23102322 + 1700030C12Rik processed_transcript processed_transcript MGP_CBAJ_T0016918.1 MGP_CBAJ_G0014899.1 mouse_genomes_project 11 23100443 23101853 + 1700030C12Rik processed_transcript processed_transcript MGP_CBAJ_T0016919.1 MGP_CBAJ_G0014899.1 mouse_genomes_project 11 23101511 23102305 + 1700030C12Rik processed_transcript processed_transcript MGP_CBAJ_T0031049.1 MGP_CBAJ_G0018607.1 mouse_genomes_project 11 93298218 93803656 + MGP_CBAJ_P0031049 Bcas3 protein_coding protein_coding MGP_CBAJ_T0031050.1 MGP_CBAJ_G0018607.1 mouse_genomes_project 11 93298221 93465434 + MGP_CBAJ_P0031050 Bcas3 protein_coding protein_coding MGP_CBAJ_T0031051.1 MGP_CBAJ_G0018607.1 mouse_genomes_project 11 93298239 93319075 + MGP_CBAJ_P0031051 Bcas3 protein_coding protein_coding MGP_CBAJ_T0031052.1 MGP_CBAJ_G0018607.1 mouse_genomes_project 11 93298266 93802947 + MGP_CBAJ_P0031052 Bcas3 protein_coding protein_coding MGP_CBAJ_T0031053.1 MGP_CBAJ_G0018607.1 mouse_genomes_project 11 93298266 93802947 + MGP_CBAJ_P0031053 Bcas3 protein_coding protein_coding MGP_CBAJ_T0031054.1 MGP_CBAJ_G0018607.1 mouse_genomes_project 11 93420997 93803655 + MGP_CBAJ_P0031054 Bcas3 protein_coding protein_coding MGP_CBAJ_T0031055.1 MGP_CBAJ_G0018607.1 mouse_genomes_project 11 93425595 93451907 + MGP_CBAJ_P0031055 Bcas3 protein_coding protein_coding MGP_CBAJ_T0031056.1 MGP_CBAJ_G0018607.1 mouse_genomes_project 11 93447481 93450828 + Bcas3 protein_coding processed_transcript MGP_CBAJ_T0031057.1 MGP_CBAJ_G0018607.1 mouse_genomes_project 11 93464069 93803655 + MGP_CBAJ_P0031057 Bcas3 protein_coding protein_coding MGP_CBAJ_T0031058.1 MGP_CBAJ_G0018607.1 mouse_genomes_project 11 93464080 93803655 + MGP_CBAJ_P0031058 Bcas3 protein_coding protein_coding MGP_CBAJ_T0031059.1 MGP_CBAJ_G0018607.1 mouse_genomes_project 11 93548693 93571186 + Bcas3 protein_coding processed_transcript MGP_CBAJ_T0031060.1 MGP_CBAJ_G0018607.1 mouse_genomes_project 11 93610837 93803652 + Bcas3 protein_coding processed_transcript MGP_CBAJ_T0031061.1 MGP_CBAJ_G0018607.1 mouse_genomes_project 11 93779421 93802987 + MGP_CBAJ_P0031061 Bcas3 protein_coding protein_coding MGP_CBAJ_T0031062.1 MGP_CBAJ_G0018607.1 mouse_genomes_project 11 93799009 93803243 + Bcas3 protein_coding processed_transcript MGP_CBAJ_T0031063.1 MGP_CBAJ_G0018607.1 mouse_genomes_project 11 93799562 93802904 + Bcas3 protein_coding processed_transcript MGP_CBAJ_T0029031.1 MGP_CBAJ_G0018130.1 mouse_genomes_project 11 63995616 63996727 - MGP_CBAJ_P0029031 Olfr223 protein_coding protein_coding MGP_CBAJ_T0032583.1 MGP_CBAJ_G0018995.1 mouse_genomes_project 11 115403078 115521344 - MGP_CBAJ_P0032583 Kansl1 protein_coding protein_coding MGP_CBAJ_T0032584.1 MGP_CBAJ_G0018995.1 mouse_genomes_project 11 115403350 115521344 - MGP_CBAJ_P0032584 Kansl1 protein_coding protein_coding MGP_CBAJ_T0032585.1 MGP_CBAJ_G0018995.1 mouse_genomes_project 11 115403350 115550362 - MGP_CBAJ_P0032585 Kansl1 protein_coding protein_coding MGP_CBAJ_T0032586.1 MGP_CBAJ_G0018995.1 mouse_genomes_project 11 115403394 115520751 - MGP_CBAJ_P0032586 Kansl1 protein_coding protein_coding MGP_CBAJ_T0032587.1 MGP_CBAJ_G0018995.1 mouse_genomes_project 11 115404770 115415329 - Kansl1 protein_coding processed_transcript MGP_CBAJ_T0032588.1 MGP_CBAJ_G0018995.1 mouse_genomes_project 11 115503994 115549492 - MGP_CBAJ_P0032588 Kansl1 protein_coding protein_coding MGP_CBAJ_T0033286.1 MGP_CBAJ_G0019143.1 mouse_genomes_project 11 128969144 128972143 + MGP_CBAJ_P0033286 Galr2 protein_coding protein_coding MGP_CBAJ_T0033287.1 MGP_CBAJ_G0019143.1 mouse_genomes_project 11 128969691 128971866 + Galr2 protein_coding processed_transcript MGP_CBAJ_T0006244.1 MGP_CBAJ_G0005200.1 mouse_genomes_project 11 110659188 110661229 + Gm12349 lincRNA lincRNA MGP_CBAJ_T0028119.1 MGP_CBAJ_G0017856.1 mouse_genomes_project 11 32911095 32918819 - protein_coding retained_intron MGP_CBAJ_T0028120.1 MGP_CBAJ_G0017856.1 mouse_genomes_project 11 32911096 32923860 - MGP_CBAJ_P0028120 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028121.1 MGP_CBAJ_G0017856.1 mouse_genomes_project 11 32911106 32923141 - MGP_CBAJ_P0028121 protein_coding unknown_likely_coding MGP_CBAJ_T0028122.1 MGP_CBAJ_G0017856.1 mouse_genomes_project 11 32911313 32912649 - MGP_CBAJ_P0028122 protein_coding protein_coding MGP_CBAJ_T0028123.1 MGP_CBAJ_G0017856.1 mouse_genomes_project 11 32911459 32912410 - protein_coding retained_intron MGP_CBAJ_T0028124.1 MGP_CBAJ_G0017856.1 mouse_genomes_project 11 32911908 32912780 - protein_coding retained_intron MGP_CBAJ_T0028125.1 MGP_CBAJ_G0017856.1 mouse_genomes_project 11 32915795 32923860 - MGP_CBAJ_P0028125 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028126.1 MGP_CBAJ_G0017856.1 mouse_genomes_project 11 32916574 32923824 - MGP_CBAJ_P0028126 protein_coding protein_coding MGP_CBAJ_T0028127.1 MGP_CBAJ_G0017856.1 mouse_genomes_project 11 32917508 32923839 - MGP_CBAJ_P0028127 protein_coding protein_coding MGP_CBAJ_T0031698.1 MGP_CBAJ_G0018768.1 mouse_genomes_project 11 107647702 107655519 + MGP_CBAJ_P0031698 Lasp1 protein_coding protein_coding MGP_CBAJ_T0031699.1 MGP_CBAJ_G0018768.1 mouse_genomes_project 11 107647885 107690217 + MGP_CBAJ_P0031699 Lasp1 protein_coding protein_coding MGP_CBAJ_T0031700.1 MGP_CBAJ_G0018768.1 mouse_genomes_project 11 107648374 107655999 + Lasp1 protein_coding retained_intron MGP_CBAJ_T0031701.1 MGP_CBAJ_G0018768.1 mouse_genomes_project 11 107648540 107685052 + MGP_CBAJ_P0031701 Lasp1 protein_coding protein_coding MGP_CBAJ_T0031702.1 MGP_CBAJ_G0018768.1 mouse_genomes_project 11 107648700 107685040 + MGP_CBAJ_P0031702 Lasp1 protein_coding protein_coding MGP_CBAJ_T0031703.1 MGP_CBAJ_G0018768.1 mouse_genomes_project 11 107648873 107685008 + MGP_CBAJ_P0031703 Lasp1 protein_coding protein_coding MGP_CBAJ_T0031704.1 MGP_CBAJ_G0018768.1 mouse_genomes_project 11 107648999 107673507 + MGP_CBAJ_P0031704 Lasp1 protein_coding protein_coding MGP_CBAJ_T0031705.1 MGP_CBAJ_G0018768.1 mouse_genomes_project 11 107649005 107655599 + MGP_CBAJ_P0031705 Lasp1 protein_coding protein_coding MGP_CBAJ_T0031706.1 MGP_CBAJ_G0018768.1 mouse_genomes_project 11 107650697 107673509 + MGP_CBAJ_P0031706 Lasp1 protein_coding protein_coding MGP_CBAJ_T0031707.1 MGP_CBAJ_G0018768.1 mouse_genomes_project 11 107653871 107687571 + MGP_CBAJ_P0031707 Lasp1 protein_coding protein_coding MGP_CBAJ_T0031708.1 MGP_CBAJ_G0018768.1 mouse_genomes_project 11 107654989 107655580 + MGP_CBAJ_P0031708 Lasp1 protein_coding protein_coding MGP_CBAJ_T0031709.1 MGP_CBAJ_G0018768.1 mouse_genomes_project 11 107655181 107664466 + MGP_CBAJ_P0031709 Lasp1 protein_coding protein_coding MGP_CBAJ_T0031710.1 MGP_CBAJ_G0018768.1 mouse_genomes_project 11 107663931 107673548 + MGP_CBAJ_P0031710 Lasp1 protein_coding protein_coding MGP_CBAJ_T0031711.1 MGP_CBAJ_G0018768.1 mouse_genomes_project 11 107684644 107687657 + Lasp1 protein_coding retained_intron MGP_CBAJ_T0031712.1 MGP_CBAJ_G0018768.1 mouse_genomes_project 11 107684864 107685832 + Lasp1 protein_coding retained_intron MGP_CBAJ_T0009559.1 MGP_CBAJ_G0007697.1 mouse_genomes_project 11 55457206 55457297 + Mir3061 miRNA miRNA MGP_CBAJ_T0016981.1 MGP_CBAJ_G0014936.1 mouse_genomes_project 11 106019204 106040978 - Gm11529 processed_transcript processed_transcript MGP_CBAJ_T0031575.1 MGP_CBAJ_G0018739.1 mouse_genomes_project 11 106441088 106447690 - MGP_CBAJ_P0031575 Nfe2l1 protein_coding protein_coding MGP_CBAJ_T0031576.1 MGP_CBAJ_G0018739.1 mouse_genomes_project 11 106441273 106453263 - MGP_CBAJ_P0031576 Nfe2l1 protein_coding protein_coding MGP_CBAJ_T0031577.1 MGP_CBAJ_G0018739.1 mouse_genomes_project 11 106442852 106455546 - MGP_CBAJ_P0031577 Nfe2l1 protein_coding protein_coding MGP_CBAJ_T0031578.1 MGP_CBAJ_G0018739.1 mouse_genomes_project 11 106443769 106447804 - MGP_CBAJ_P0031578 Nfe2l1 protein_coding protein_coding MGP_CBAJ_T0031579.1 MGP_CBAJ_G0018739.1 mouse_genomes_project 11 106444146 106447685 - MGP_CBAJ_P0031579 Nfe2l1 protein_coding protein_coding MGP_CBAJ_T0031580.1 MGP_CBAJ_G0018739.1 mouse_genomes_project 11 106445022 106446402 - Nfe2l1 protein_coding processed_transcript MGP_CBAJ_T0031581.1 MGP_CBAJ_G0018739.1 mouse_genomes_project 11 106445899 106448229 - Nfe2l1 protein_coding processed_transcript MGP_CBAJ_T0031582.1 MGP_CBAJ_G0018739.1 mouse_genomes_project 11 106453276 106455044 - Nfe2l1 protein_coding processed_transcript MGP_CBAJ_T0027417.1 MGP_CBAJ_G0017695.1 mouse_genomes_project 11 1096300 1103944 - MGP_CBAJ_P0027417 Slc35e4 protein_coding protein_coding MGP_CBAJ_T0027418.1 MGP_CBAJ_G0017695.1 mouse_genomes_project 11 1096301 1103944 - MGP_CBAJ_P0027418 Slc35e4 protein_coding protein_coding MGP_CBAJ_T0031392.1 MGP_CBAJ_G0018685.1 mouse_genomes_project 11 103743331 103765647 - Mycbpap protein_coding retained_intron MGP_CBAJ_T0031393.1 MGP_CBAJ_G0018685.1 mouse_genomes_project 11 103743331 103745485 - Mycbpap protein_coding processed_transcript MGP_CBAJ_T0031394.1 MGP_CBAJ_G0018685.1 mouse_genomes_project 11 103743331 103749263 - MGP_CBAJ_P0031394 Mycbpap protein_coding protein_coding MGP_CBAJ_T0031395.1 MGP_CBAJ_G0018685.1 mouse_genomes_project 11 103743331 103765647 - MGP_CBAJ_P0031395 Mycbpap protein_coding protein_coding MGP_CBAJ_T0031396.1 MGP_CBAJ_G0018685.1 mouse_genomes_project 11 103744943 103745472 - Mycbpap protein_coding retained_intron MGP_CBAJ_T0031397.1 MGP_CBAJ_G0018685.1 mouse_genomes_project 11 103749603 103752077 - Mycbpap protein_coding retained_intron MGP_CBAJ_T0012379.1 MGP_CBAJ_G0010491.1 mouse_genomes_project 11 23557269 23557528 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0030803.1 MGP_CBAJ_G0018537.1 mouse_genomes_project 11 87710235 87725229 + MGP_CBAJ_P0030803 Zfp207 protein_coding protein_coding MGP_CBAJ_T0030804.1 MGP_CBAJ_G0018537.1 mouse_genomes_project 11 87710235 87734515 + MGP_CBAJ_P0030804 Zfp207 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030805.1 MGP_CBAJ_G0018537.1 mouse_genomes_project 11 87710259 87725232 + MGP_CBAJ_P0030805 Zfp207 protein_coding protein_coding MGP_CBAJ_T0030806.1 MGP_CBAJ_G0018537.1 mouse_genomes_project 11 87710287 87723267 + MGP_CBAJ_P0030806 Zfp207 protein_coding protein_coding MGP_CBAJ_T0030807.1 MGP_CBAJ_G0018537.1 mouse_genomes_project 11 87710353 87724550 + MGP_CBAJ_P0030807 Zfp207 protein_coding protein_coding MGP_CBAJ_T0030808.1 MGP_CBAJ_G0018537.1 mouse_genomes_project 11 87712813 87718676 + MGP_CBAJ_P0030808 Zfp207 protein_coding protein_coding MGP_CBAJ_T0030809.1 MGP_CBAJ_G0018537.1 mouse_genomes_project 11 87715926 87733603 + MGP_CBAJ_P0030809 Zfp207 protein_coding nonsense_mediated_decay MGP_CBAJ_T0009545.1 MGP_CBAJ_G0007683.1 mouse_genomes_project 11 28998573 28998681 + Mir217 miRNA miRNA MGP_CBAJ_T0101027.1 MGP_CBAJ_G0039261.1 mouse_genomes_project 11 115666373 115667700 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0031604.1 MGP_CBAJ_G0018743.1 mouse_genomes_project 11 106581079 106589776 - Pnpo protein_coding processed_transcript MGP_CBAJ_T0031605.1 MGP_CBAJ_G0018743.1 mouse_genomes_project 11 106581080 106589865 - MGP_CBAJ_P0031605 Pnpo protein_coding protein_coding MGP_CBAJ_T0101536.1 MGP_CBAJ_G0039568.1 mouse_genomes_project 11 57604900 57605072 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0032843.1 MGP_CBAJ_G0019051.1 mouse_genomes_project 11 121146870 121185191 + MGP_CBAJ_P0032843 Gna13 protein_coding protein_coding MGP_CBAJ_T0032844.1 MGP_CBAJ_G0019051.1 mouse_genomes_project 11 121146870 121164514 + MGP_CBAJ_P0032844 Gna13 protein_coding protein_coding MGP_CBAJ_T0031413.1 MGP_CBAJ_G0018691.1 mouse_genomes_project 11 103927036 103933195 + MGP_CBAJ_P0031413 Mrpl27 protein_coding protein_coding MGP_CBAJ_T0031414.1 MGP_CBAJ_G0018691.1 mouse_genomes_project 11 103927045 103933024 + Mrpl27 protein_coding processed_transcript MGP_CBAJ_T0031415.1 MGP_CBAJ_G0018691.1 mouse_genomes_project 11 103927280 103932726 + Mrpl27 protein_coding processed_transcript MGP_CBAJ_T0031416.1 MGP_CBAJ_G0018691.1 mouse_genomes_project 11 103927300 103932822 + Mrpl27 protein_coding processed_transcript MGP_CBAJ_T0030702.1 MGP_CBAJ_G0018510.1 mouse_genomes_project 11 85624639 85640418 - MGP_CBAJ_P0030702 Tnfaip1 protein_coding protein_coding MGP_CBAJ_T0030703.1 MGP_CBAJ_G0018510.1 mouse_genomes_project 11 85624639 85640479 - MGP_CBAJ_P0030703 Tnfaip1 protein_coding protein_coding MGP_CBAJ_T0030902.1 MGP_CBAJ_G0018569.1 mouse_genomes_project 11 90988408 90992743 - MGP_CBAJ_P0030902 Pex12 protein_coding protein_coding MGP_CBAJ_T0030903.1 MGP_CBAJ_G0018569.1 mouse_genomes_project 11 90988841 90992661 - MGP_CBAJ_P0030903 Pex12 protein_coding protein_coding MGP_CBAJ_T0030904.1 MGP_CBAJ_G0018569.1 mouse_genomes_project 11 90988841 90992708 - MGP_CBAJ_P0030904 Pex12 protein_coding protein_coding MGP_CBAJ_T0030905.1 MGP_CBAJ_G0018569.1 mouse_genomes_project 11 90988842 90992663 - MGP_CBAJ_P0030905 Pex12 protein_coding protein_coding MGP_CBAJ_T0030906.1 MGP_CBAJ_G0018569.1 mouse_genomes_project 11 90991669 90992704 - Pex12 protein_coding processed_transcript MGP_CBAJ_T0030907.1 MGP_CBAJ_G0018569.1 mouse_genomes_project 11 90991795 90996349 - MGP_CBAJ_P0030907 Pex12 protein_coding protein_coding MGP_CBAJ_T0030908.1 MGP_CBAJ_G0018569.1 mouse_genomes_project 11 90992094 90992724 - MGP_CBAJ_P0030908 Pex12 protein_coding protein_coding MGP_CBAJ_T0012537.1 MGP_CBAJ_G0010649.1 mouse_genomes_project 11 89023153 89023972 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031256.1 MGP_CBAJ_G0018655.1 mouse_genomes_project 11 97524424 97551920 + MGP_CBAJ_P0031256 Trim25 protein_coding protein_coding MGP_CBAJ_T0031257.1 MGP_CBAJ_G0018655.1 mouse_genomes_project 11 97524424 97551920 + MGP_CBAJ_P0031257 Trim25 protein_coding protein_coding MGP_CBAJ_T0031258.1 MGP_CBAJ_G0018655.1 mouse_genomes_project 11 97524424 97545354 + MGP_CBAJ_P0031258 Trim25 protein_coding protein_coding MGP_CBAJ_T0012332.1 MGP_CBAJ_G0010444.1 mouse_genomes_project 11 6718275 6719045 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006153.1 MGP_CBAJ_G0005134.1 mouse_genomes_project 11 62130998 62133928 - Gm12249 lincRNA lincRNA MGP_CBAJ_T0030446.1 MGP_CBAJ_G0018455.1 mouse_genomes_project 11 82973528 82980562 + MGP_CBAJ_P0030446 Rnmtl1 protein_coding protein_coding MGP_CBAJ_T0030447.1 MGP_CBAJ_G0018455.1 mouse_genomes_project 11 82973549 82974697 + Rnmtl1 protein_coding retained_intron MGP_CBAJ_T0030448.1 MGP_CBAJ_G0018455.1 mouse_genomes_project 11 82979153 82980450 + Rnmtl1 protein_coding processed_transcript MGP_CBAJ_T0032659.1 MGP_CBAJ_G0019011.1 mouse_genomes_project 11 117345020 117372655 + MGP_CBAJ_P0032659 Dcaf7 protein_coding protein_coding MGP_CBAJ_T0032660.1 MGP_CBAJ_G0019011.1 mouse_genomes_project 11 117345048 117358900 + Dcaf7 protein_coding retained_intron MGP_CBAJ_T0031683.1 MGP_CBAJ_G0018763.1 mouse_genomes_project 11 107515331 107529297 + MGP_CBAJ_P0031683 Psmb3 protein_coding protein_coding MGP_CBAJ_T0031684.1 MGP_CBAJ_G0018763.1 mouse_genomes_project 11 107515366 107523975 + Psmb3 protein_coding retained_intron MGP_CBAJ_T0031685.1 MGP_CBAJ_G0018763.1 mouse_genomes_project 11 107527876 107529297 + Psmb3 protein_coding retained_intron MGP_CBAJ_T0101546.1 MGP_CBAJ_G0039578.1 mouse_genomes_project 11 80245794 80245835 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0003163.1 MGP_CBAJ_G0002933.1 mouse_genomes_project 11 86818439 86837060 - Rab11fip4os1 antisense antisense MGP_CBAJ_T0012408.1 MGP_CBAJ_G0010520.1 mouse_genomes_project 11 33562223 33563181 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0030186.1 MGP_CBAJ_G0018377.1 mouse_genomes_project 11 79408916 79411724 - MGP_CBAJ_P0030186 Gsg2 protein_coding protein_coding MGP_CBAJ_T0031291.1 MGP_CBAJ_G0018667.1 mouse_genomes_project 11 99344220 99391385 - MGP_CBAJ_P0031291 Tom1l1 protein_coding protein_coding MGP_CBAJ_T0031292.1 MGP_CBAJ_G0018667.1 mouse_genomes_project 11 99344220 99391363 - MGP_CBAJ_P0031292 Tom1l1 protein_coding protein_coding MGP_CBAJ_T0031293.1 MGP_CBAJ_G0018667.1 mouse_genomes_project 11 99344220 99391354 - MGP_CBAJ_P0031293 Tom1l1 protein_coding protein_coding MGP_CBAJ_T0031294.1 MGP_CBAJ_G0018667.1 mouse_genomes_project 11 99344758 99348431 - Tom1l1 protein_coding retained_intron MGP_CBAJ_T0031295.1 MGP_CBAJ_G0018667.1 mouse_genomes_project 11 99355589 99361849 - Tom1l1 protein_coding retained_intron MGP_CBAJ_T0031296.1 MGP_CBAJ_G0018667.1 mouse_genomes_project 11 99372035 99391372 - MGP_CBAJ_P0031296 Tom1l1 protein_coding protein_coding MGP_CBAJ_T0031297.1 MGP_CBAJ_G0018667.1 mouse_genomes_project 11 99387066 99392149 - Tom1l1 protein_coding processed_transcript MGP_CBAJ_T0006136.1 MGP_CBAJ_G0005118.1 mouse_genomes_project 11 46105582 46316915 + Gm12153 lincRNA lincRNA MGP_CBAJ_T0098687.1 MGP_CBAJ_G0036942.1 mouse_genomes_project 11 58624489 58624659 + Gm23021 snRNA snRNA MGP_CBAJ_T0031906.1 MGP_CBAJ_G0018822.1 mouse_genomes_project 11 109737744 109744548 - MGP_CBAJ_P0031906 Krt40 protein_coding protein_coding MGP_CBAJ_T0031907.1 MGP_CBAJ_G0018822.1 mouse_genomes_project 11 109737744 109744548 - MGP_CBAJ_P0031907 Krt40 protein_coding protein_coding MGP_CBAJ_T0033197.1 MGP_CBAJ_G0019126.1 mouse_genomes_project 11 128530648 128536960 + MGP_CBAJ_P0033197 Smim5 protein_coding protein_coding MGP_CBAJ_T0033198.1 MGP_CBAJ_G0019126.1 mouse_genomes_project 11 128530860 128536587 + MGP_CBAJ_P0033198 Smim5 protein_coding protein_coding MGP_CBAJ_T0033199.1 MGP_CBAJ_G0019126.1 mouse_genomes_project 11 128530884 128536404 + MGP_CBAJ_P0033199 Smim5 protein_coding protein_coding MGP_CBAJ_T0012522.1 MGP_CBAJ_G0010634.1 mouse_genomes_project 11 84430150 84431098 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0032761.1 MGP_CBAJ_G0019035.1 mouse_genomes_project 11 118259124 118365818 - MGP_CBAJ_P0032761 Smurf2 protein_coding protein_coding MGP_CBAJ_T0032762.1 MGP_CBAJ_G0019035.1 mouse_genomes_project 11 118261084 118365378 - Smurf2 protein_coding processed_transcript MGP_CBAJ_T0032763.1 MGP_CBAJ_G0019035.1 mouse_genomes_project 11 118261084 118365573 - MGP_CBAJ_P0032763 Smurf2 protein_coding protein_coding MGP_CBAJ_T0032764.1 MGP_CBAJ_G0019035.1 mouse_genomes_project 11 118261673 118365462 - MGP_CBAJ_P0032764 Smurf2 protein_coding protein_coding MGP_CBAJ_T0032765.1 MGP_CBAJ_G0019035.1 mouse_genomes_project 11 118263623 118267903 - Smurf2 protein_coding processed_transcript MGP_CBAJ_T0032766.1 MGP_CBAJ_G0019035.1 mouse_genomes_project 11 118269481 118278207 - Smurf2 protein_coding processed_transcript MGP_CBAJ_T0030451.1 MGP_CBAJ_G0018457.1 mouse_genomes_project 11 83144687 83155170 + MGP_CBAJ_P0030451 Timm22 protein_coding protein_coding MGP_CBAJ_T0030452.1 MGP_CBAJ_G0018457.1 mouse_genomes_project 11 83144878 83157133 + MGP_CBAJ_P0030452 Timm22 protein_coding protein_coding MGP_CBAJ_T0030453.1 MGP_CBAJ_G0018457.1 mouse_genomes_project 11 83144926 83154151 + MGP_CBAJ_P0030453 Timm22 protein_coding protein_coding MGP_CBAJ_T0030454.1 MGP_CBAJ_G0018457.1 mouse_genomes_project 11 83144940 83149992 + MGP_CBAJ_P0030454 Timm22 protein_coding nonsense_mediated_decay MGP_CBAJ_T0003295.1 MGP_CBAJ_G0003037.1 mouse_genomes_project 11 133993755 134016160 - Gm17178 antisense antisense MGP_CBAJ_T0003078.1 MGP_CBAJ_G0002861.1 mouse_genomes_project 11 48561987 48563113 - Gm16034 antisense antisense MGP_CBAJ_T0031960.1 MGP_CBAJ_G0018867.1 mouse_genomes_project 11 110620339 110625152 - MGP_CBAJ_P0031960 Krt17 protein_coding protein_coding MGP_CBAJ_T0032138.1 MGP_CBAJ_G0018908.1 mouse_genomes_project 11 111765469 111767692 + MGP_CBAJ_P0032138 Ramp2 protein_coding protein_coding MGP_CBAJ_T0032139.1 MGP_CBAJ_G0018908.1 mouse_genomes_project 11 111765753 111767126 + Ramp2 protein_coding retained_intron MGP_CBAJ_T0032140.1 MGP_CBAJ_G0018908.1 mouse_genomes_project 11 111765832 111780623 + MGP_CBAJ_P0032140 Ramp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032141.1 MGP_CBAJ_G0018908.1 mouse_genomes_project 11 111765870 111767692 + MGP_CBAJ_P0032141 Ramp2 protein_coding protein_coding MGP_CBAJ_T0032142.1 MGP_CBAJ_G0018908.1 mouse_genomes_project 11 111765873 111767692 + MGP_CBAJ_P0032142 Ramp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032143.1 MGP_CBAJ_G0018908.1 mouse_genomes_project 11 111766008 111767078 + MGP_CBAJ_P0032143 Ramp2 protein_coding protein_coding MGP_CBAJ_T0032144.1 MGP_CBAJ_G0018908.1 mouse_genomes_project 11 111766374 111767692 + Ramp2 protein_coding retained_intron MGP_CBAJ_T0032145.1 MGP_CBAJ_G0018908.1 mouse_genomes_project 11 111766534 111767506 + MGP_CBAJ_P0032145 Ramp2 protein_coding protein_coding MGP_CBAJ_T0028381.1 MGP_CBAJ_G0017929.1 mouse_genomes_project 11 49424897 50184007 - MGP_CBAJ_P0028381 Sgcd protein_coding protein_coding MGP_CBAJ_T0028382.1 MGP_CBAJ_G0017929.1 mouse_genomes_project 11 49507392 49944305 - MGP_CBAJ_P0028382 Sgcd protein_coding protein_coding MGP_CBAJ_T0028383.1 MGP_CBAJ_G0017929.1 mouse_genomes_project 11 49914271 50251011 - Sgcd protein_coding processed_transcript MGP_CBAJ_T0028384.1 MGP_CBAJ_G0017929.1 mouse_genomes_project 11 50183846 50620076 - Sgcd protein_coding processed_transcript MGP_CBAJ_T0028385.1 MGP_CBAJ_G0017930.1 mouse_genomes_project 11 51521899 51529496 + Rack1 protein_coding retained_intron MGP_CBAJ_T0028386.1 MGP_CBAJ_G0017930.1 mouse_genomes_project 11 51521924 51530610 + Rack1 protein_coding processed_transcript MGP_CBAJ_T0028387.1 MGP_CBAJ_G0017930.1 mouse_genomes_project 11 51521927 51530956 + MGP_CBAJ_P0028387 Rack1 protein_coding protein_coding MGP_CBAJ_T0028388.1 MGP_CBAJ_G0017930.1 mouse_genomes_project 11 51521941 51524235 + Rack1 protein_coding retained_intron MGP_CBAJ_T0028389.1 MGP_CBAJ_G0017930.1 mouse_genomes_project 11 51524719 51530595 + Rack1 protein_coding processed_transcript MGP_CBAJ_T0028390.1 MGP_CBAJ_G0017930.1 mouse_genomes_project 11 51529969 51530615 + Rack1 protein_coding processed_transcript MGP_CBAJ_T0012584.1 MGP_CBAJ_G0010696.1 mouse_genomes_project 11 113444970 113445776 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0029567.1 MGP_CBAJ_G0018242.1 mouse_genomes_project 11 74782425 74784287 + MGP_CBAJ_P0029567 Borcs6 protein_coding protein_coding MGP_CBAJ_T0003121.1 MGP_CBAJ_G0002898.1 mouse_genomes_project 11 67337370 67338296 + Gm12949 antisense antisense MGP_CBAJ_T0027956.1 MGP_CBAJ_G0017820.1 mouse_genomes_project 11 23282023 23359740 + MGP_CBAJ_P0027956 Pus10 protein_coding protein_coding MGP_CBAJ_T0027957.1 MGP_CBAJ_G0017820.1 mouse_genomes_project 11 23282046 23358389 + MGP_CBAJ_P0027957 Pus10 protein_coding protein_coding MGP_CBAJ_T0027958.1 MGP_CBAJ_G0017820.1 mouse_genomes_project 11 23282356 23359740 + MGP_CBAJ_P0027958 Pus10 protein_coding protein_coding MGP_CBAJ_T0027959.1 MGP_CBAJ_G0017820.1 mouse_genomes_project 11 23282537 23291676 + Pus10 protein_coding retained_intron MGP_CBAJ_T0027960.1 MGP_CBAJ_G0017820.1 mouse_genomes_project 11 23282860 23291562 + MGP_CBAJ_P0027960 Pus10 protein_coding protein_coding MGP_CBAJ_T0027961.1 MGP_CBAJ_G0017820.1 mouse_genomes_project 11 23344456 23355935 + Pus10 protein_coding retained_intron MGP_CBAJ_T0027962.1 MGP_CBAJ_G0017820.1 mouse_genomes_project 11 23345530 23358262 + Pus10 protein_coding retained_intron MGP_CBAJ_T0006162.1 MGP_CBAJ_G0005142.1 mouse_genomes_project 11 66681206 66683028 + Gm12273 lincRNA lincRNA MGP_CBAJ_T0003158.1 MGP_CBAJ_G0002928.1 mouse_genomes_project 11 85017251 85019905 - Dhrs13os antisense antisense MGP_CBAJ_T0033630.1 MGP_CBAJ_G0019210.1 mouse_genomes_project 11 133313216 133321280 - MGP_CBAJ_P0033630 Enthd2 protein_coding protein_coding MGP_CBAJ_T0033631.1 MGP_CBAJ_G0019210.1 mouse_genomes_project 11 133313216 133321280 - MGP_CBAJ_P0033631 Enthd2 protein_coding protein_coding MGP_CBAJ_T0033632.1 MGP_CBAJ_G0019210.1 mouse_genomes_project 11 133313216 133321280 - MGP_CBAJ_P0033632 Enthd2 protein_coding protein_coding MGP_CBAJ_T0033633.1 MGP_CBAJ_G0019210.1 mouse_genomes_project 11 133316845 133319934 - Enthd2 protein_coding processed_transcript MGP_CBAJ_T0033634.1 MGP_CBAJ_G0019210.1 mouse_genomes_project 11 133318078 133319809 - Enthd2 protein_coding processed_transcript MGP_CBAJ_T0033635.1 MGP_CBAJ_G0019210.1 mouse_genomes_project 11 133319447 133321249 - Enthd2 protein_coding processed_transcript MGP_CBAJ_T0003135.1 MGP_CBAJ_G0002910.1 mouse_genomes_project 11 69088916 69092691 + 2810001G20Rik antisense antisense MGP_CBAJ_T0003136.1 MGP_CBAJ_G0002910.1 mouse_genomes_project 11 69089014 69092691 + 2810001G20Rik antisense antisense MGP_CBAJ_T0028953.1 MGP_CBAJ_G0018099.1 mouse_genomes_project 11 63057890 63063003 + MGP_CBAJ_P0028953 Olfr315 protein_coding protein_coding MGP_CBAJ_T0028954.1 MGP_CBAJ_G0018099.1 mouse_genomes_project 11 63062583 63063581 + MGP_CBAJ_P0028954 Olfr315 protein_coding protein_coding MGP_CBAJ_T0009550.1 MGP_CBAJ_G0007688.1 mouse_genomes_project 11 45417193 45417258 - Mir146 miRNA miRNA MGP_CBAJ_T0003197.1 MGP_CBAJ_G0002958.1 mouse_genomes_project 11 105118784 105139754 - antisense antisense MGP_CBAJ_T0012413.1 MGP_CBAJ_G0010525.1 mouse_genomes_project 11 36432798 36433270 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0029354.1 MGP_CBAJ_G0018191.1 mouse_genomes_project 11 67696962 67736457 + MGP_CBAJ_P0029354 Fbxw10 protein_coding protein_coding MGP_CBAJ_T0029355.1 MGP_CBAJ_G0018191.1 mouse_genomes_project 11 67697016 67736454 + MGP_CBAJ_P0029355 Fbxw10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029356.1 MGP_CBAJ_G0018191.1 mouse_genomes_project 11 67697016 67736454 + MGP_CBAJ_P0029356 Fbxw10 protein_coding protein_coding MGP_CBAJ_T0029357.1 MGP_CBAJ_G0018191.1 mouse_genomes_project 11 67697021 67704729 + Fbxw10 protein_coding retained_intron MGP_CBAJ_T0029358.1 MGP_CBAJ_G0018191.1 mouse_genomes_project 11 67697025 67736435 + MGP_CBAJ_P0029358 Fbxw10 protein_coding protein_coding MGP_CBAJ_T0029359.1 MGP_CBAJ_G0018191.1 mouse_genomes_project 11 67733867 67735745 + Fbxw10 protein_coding processed_transcript MGP_CBAJ_T0030799.1 MGP_CBAJ_G0018536.1 mouse_genomes_project 11 87681668 87702193 - MGP_CBAJ_P0030799 5730455P16Rik protein_coding protein_coding MGP_CBAJ_T0030800.1 MGP_CBAJ_G0018536.1 mouse_genomes_project 11 87681669 87702212 - MGP_CBAJ_P0030800 5730455P16Rik protein_coding protein_coding MGP_CBAJ_T0030801.1 MGP_CBAJ_G0018536.1 mouse_genomes_project 11 87685155 87692618 - 5730455P16Rik protein_coding retained_intron MGP_CBAJ_T0030802.1 MGP_CBAJ_G0018536.1 mouse_genomes_project 11 87694640 87702212 - MGP_CBAJ_P0030802 5730455P16Rik protein_coding protein_coding MGP_CBAJ_T0031366.1 MGP_CBAJ_G0018682.1 mouse_genomes_project 11 103634291 103712770 - MGP_CBAJ_P0031366 Cacna1g protein_coding protein_coding MGP_CBAJ_T0031367.1 MGP_CBAJ_G0018682.1 mouse_genomes_project 11 103634291 103712770 - MGP_CBAJ_P0031367 Cacna1g protein_coding protein_coding MGP_CBAJ_T0031368.1 MGP_CBAJ_G0018682.1 mouse_genomes_project 11 103634291 103712770 - MGP_CBAJ_P0031368 Cacna1g protein_coding protein_coding MGP_CBAJ_T0031369.1 MGP_CBAJ_G0018682.1 mouse_genomes_project 11 103634291 103712770 - MGP_CBAJ_P0031369 Cacna1g protein_coding protein_coding MGP_CBAJ_T0031370.1 MGP_CBAJ_G0018682.1 mouse_genomes_project 11 103634291 103712770 - MGP_CBAJ_P0031370 Cacna1g protein_coding protein_coding MGP_CBAJ_T0031371.1 MGP_CBAJ_G0018682.1 mouse_genomes_project 11 103634291 103712770 - MGP_CBAJ_P0031371 Cacna1g protein_coding protein_coding MGP_CBAJ_T0031372.1 MGP_CBAJ_G0018682.1 mouse_genomes_project 11 103634291 103712770 - MGP_CBAJ_P0031372 Cacna1g protein_coding protein_coding MGP_CBAJ_T0031373.1 MGP_CBAJ_G0018682.1 mouse_genomes_project 11 103634291 103712770 - MGP_CBAJ_P0031373 Cacna1g protein_coding protein_coding MGP_CBAJ_T0031374.1 MGP_CBAJ_G0018682.1 mouse_genomes_project 11 103634291 103712770 - MGP_CBAJ_P0031374 Cacna1g protein_coding protein_coding MGP_CBAJ_T0031375.1 MGP_CBAJ_G0018682.1 mouse_genomes_project 11 103634306 103716126 - MGP_CBAJ_P0031375 Cacna1g protein_coding protein_coding MGP_CBAJ_T0031376.1 MGP_CBAJ_G0018682.1 mouse_genomes_project 11 103634535 103712770 - MGP_CBAJ_P0031376 Cacna1g protein_coding protein_coding MGP_CBAJ_T0031377.1 MGP_CBAJ_G0018682.1 mouse_genomes_project 11 103635752 103637589 - Cacna1g protein_coding processed_transcript MGP_CBAJ_T0031378.1 MGP_CBAJ_G0018682.1 mouse_genomes_project 11 103637390 103643097 - Cacna1g protein_coding processed_transcript MGP_CBAJ_T0031379.1 MGP_CBAJ_G0018682.1 mouse_genomes_project 11 103644729 103650222 - Cacna1g protein_coding processed_transcript MGP_CBAJ_T0031380.1 MGP_CBAJ_G0018682.1 mouse_genomes_project 11 103651119 103652349 - Cacna1g protein_coding processed_transcript MGP_CBAJ_T0031381.1 MGP_CBAJ_G0018682.1 mouse_genomes_project 11 103652838 103712311 - Cacna1g protein_coding processed_transcript MGP_CBAJ_T0029223.1 MGP_CBAJ_G0018168.1 mouse_genomes_project 11 66168416 66176204 + MGP_CBAJ_P0029223 B9d1 protein_coding protein_coding MGP_CBAJ_T0029224.1 MGP_CBAJ_G0018168.1 mouse_genomes_project 11 66168475 66176204 + B9d1 protein_coding processed_transcript MGP_CBAJ_T0029225.1 MGP_CBAJ_G0018168.1 mouse_genomes_project 11 66168524 66171701 + B9d1 protein_coding processed_transcript MGP_CBAJ_T0029226.1 MGP_CBAJ_G0018168.1 mouse_genomes_project 11 66168527 66176204 + B9d1 protein_coding processed_transcript MGP_CBAJ_T0029227.1 MGP_CBAJ_G0018168.1 mouse_genomes_project 11 66172388 66176204 + MGP_CBAJ_P0029227 B9d1 protein_coding protein_coding MGP_CBAJ_T0029228.1 MGP_CBAJ_G0018168.1 mouse_genomes_project 11 66175587 66176204 + B9d1 protein_coding processed_transcript MGP_CBAJ_T0032604.1 MGP_CBAJ_G0018999.1 mouse_genomes_project 11 115796223 115880321 + MGP_CBAJ_P0032604 protein_coding protein_coding MGP_CBAJ_T0032605.1 MGP_CBAJ_G0018999.1 mouse_genomes_project 11 115816904 115841751 + protein_coding processed_transcript MGP_CBAJ_T0032975.1 MGP_CBAJ_G0019081.1 mouse_genomes_project 11 127184020 127188677 - Btbd17 protein_coding processed_transcript MGP_CBAJ_T0032976.1 MGP_CBAJ_G0019081.1 mouse_genomes_project 11 127184020 127188714 - Btbd17 protein_coding processed_transcript MGP_CBAJ_T0032977.1 MGP_CBAJ_G0019081.1 mouse_genomes_project 11 127184020 127188701 - MGP_CBAJ_P0032977 Btbd17 protein_coding protein_coding MGP_CBAJ_T0032978.1 MGP_CBAJ_G0019081.1 mouse_genomes_project 11 127184909 127188749 - Btbd17 protein_coding processed_transcript MGP_CBAJ_T0032979.1 MGP_CBAJ_G0019081.1 mouse_genomes_project 11 127185088 127188703 - Btbd17 protein_coding processed_transcript MGP_CBAJ_T0032980.1 MGP_CBAJ_G0019081.1 mouse_genomes_project 11 127185235 127188677 - Btbd17 protein_coding processed_transcript MGP_CBAJ_T0032981.1 MGP_CBAJ_G0019081.1 mouse_genomes_project 11 127185272 127188696 - Btbd17 protein_coding processed_transcript MGP_CBAJ_T0031136.1 MGP_CBAJ_G0018628.1 mouse_genomes_project 11 95513207 95549600 - MGP_CBAJ_P0031136 Rad51c protein_coding protein_coding MGP_CBAJ_T0031137.1 MGP_CBAJ_G0018628.1 mouse_genomes_project 11 95515292 95549583 - MGP_CBAJ_P0031137 Rad51c protein_coding nonsense_mediated_decay MGP_CBAJ_T0031138.1 MGP_CBAJ_G0018628.1 mouse_genomes_project 11 95515798 95550031 - MGP_CBAJ_P0031138 Rad51c protein_coding protein_coding MGP_CBAJ_T0031139.1 MGP_CBAJ_G0018628.1 mouse_genomes_project 11 95516085 95549437 - MGP_CBAJ_P0031139 Rad51c protein_coding nonsense_mediated_decay MGP_CBAJ_T0009588.1 MGP_CBAJ_G0007726.1 mouse_genomes_project 11 78551232 78551341 + Mir6338 miRNA miRNA MGP_CBAJ_T0031902.1 MGP_CBAJ_G0018819.1 mouse_genomes_project 11 109618605 109628333 - MGP_CBAJ_P0031902 Krt20 protein_coding protein_coding MGP_CBAJ_T0098183.1 MGP_CBAJ_G0036456.1 mouse_genomes_project 11 128825515 128825641 - Gm26413 scaRNA scaRNA MGP_CBAJ_T0027600.1 MGP_CBAJ_G0017736.1 mouse_genomes_project 11 3309808 3311902 - MGP_CBAJ_P0027600 Pgam2 protein_coding protein_coding MGP_CBAJ_T0098699.1 MGP_CBAJ_G0036954.1 mouse_genomes_project 11 80110528 80110635 + Gm22381 snRNA snRNA MGP_CBAJ_T0031402.1 MGP_CBAJ_G0018687.1 mouse_genomes_project 11 103800673 103872947 - MGP_CBAJ_P0031402 Acsf2 protein_coding protein_coding MGP_CBAJ_T0031403.1 MGP_CBAJ_G0018687.1 mouse_genomes_project 11 103803639 103828572 - Acsf2 protein_coding processed_transcript MGP_CBAJ_T0031405.1 MGP_CBAJ_G0018687.1 mouse_genomes_project 11 103833985 103835459 - Acsf2 protein_coding processed_transcript MGP_CBAJ_T0031406.1 MGP_CBAJ_G0018687.1 mouse_genomes_project 11 103834971 103872845 - Acsf2 protein_coding processed_transcript MGP_CBAJ_T0031554.1 MGP_CBAJ_G0018736.1 mouse_genomes_project 11 106043595 106366505 + MGP_CBAJ_P0031554 Skap1 protein_coding protein_coding MGP_CBAJ_T0031555.1 MGP_CBAJ_G0018736.1 mouse_genomes_project 11 106043595 106366694 + MGP_CBAJ_P0031555 Skap1 protein_coding protein_coding MGP_CBAJ_T0031556.1 MGP_CBAJ_G0018736.1 mouse_genomes_project 11 106043602 106078559 + MGP_CBAJ_P0031556 Skap1 protein_coding protein_coding MGP_CBAJ_T0031557.1 MGP_CBAJ_G0018736.1 mouse_genomes_project 11 106043626 106332735 + Skap1 protein_coding retained_intron MGP_CBAJ_T0031558.1 MGP_CBAJ_G0018736.1 mouse_genomes_project 11 106043629 106366505 + MGP_CBAJ_P0031558 Skap1 protein_coding protein_coding MGP_CBAJ_T0031559.1 MGP_CBAJ_G0018736.1 mouse_genomes_project 11 106043635 106169567 + MGP_CBAJ_P0031559 Skap1 protein_coding protein_coding MGP_CBAJ_T0031560.1 MGP_CBAJ_G0018736.1 mouse_genomes_project 11 106043683 106268355 + MGP_CBAJ_P0031560 Skap1 protein_coding protein_coding MGP_CBAJ_T0031561.1 MGP_CBAJ_G0018736.1 mouse_genomes_project 11 106068670 106078559 + Skap1 protein_coding processed_transcript MGP_CBAJ_T0031562.1 MGP_CBAJ_G0018736.1 mouse_genomes_project 11 106074746 106302390 + Skap1 protein_coding retained_intron MGP_CBAJ_T0031563.1 MGP_CBAJ_G0018736.1 mouse_genomes_project 11 106306187 106311127 + Skap1 protein_coding retained_intron MGP_CBAJ_T0028490.1 MGP_CBAJ_G0017965.1 mouse_genomes_project 11 52842839 52917812 + MGP_CBAJ_P0028490 Rasgef1c protein_coding protein_coding MGP_CBAJ_T0028491.1 MGP_CBAJ_G0017965.1 mouse_genomes_project 11 52843069 52918586 + MGP_CBAJ_P0028491 Rasgef1c protein_coding protein_coding MGP_CBAJ_T0028492.1 MGP_CBAJ_G0017965.1 mouse_genomes_project 11 52901663 52913342 + Rasgef1c protein_coding processed_transcript MGP_CBAJ_T0030381.1 MGP_CBAJ_G0018442.1 mouse_genomes_project 11 82251519 82276927 + MGP_CBAJ_P0030381 Inpp5k protein_coding protein_coding MGP_CBAJ_T0030382.1 MGP_CBAJ_G0018442.1 mouse_genomes_project 11 82251560 82276919 + Inpp5k protein_coding retained_intron MGP_CBAJ_T0030383.1 MGP_CBAJ_G0018442.1 mouse_genomes_project 11 82251568 82255802 + Inpp5k protein_coding retained_intron MGP_CBAJ_T0030384.1 MGP_CBAJ_G0018442.1 mouse_genomes_project 11 82251586 82276921 + MGP_CBAJ_P0030384 Inpp5k protein_coding nonsense_mediated_decay MGP_CBAJ_T0030385.1 MGP_CBAJ_G0018442.1 mouse_genomes_project 11 82262309 82275331 + Inpp5k protein_coding retained_intron MGP_CBAJ_T0030386.1 MGP_CBAJ_G0018442.1 mouse_genomes_project 11 82274840 82275786 + Inpp5k protein_coding processed_transcript MGP_CBAJ_T0030387.1 MGP_CBAJ_G0018442.1 mouse_genomes_project 11 82274900 82275919 + MGP_CBAJ_P0030387 Inpp5k protein_coding protein_coding MGP_CBAJ_T0028630.1 MGP_CBAJ_G0017999.1 mouse_genomes_project 11 54900796 54907942 + MGP_CBAJ_P0028630 protein_coding protein_coding MGP_CBAJ_T0028631.1 MGP_CBAJ_G0017999.1 mouse_genomes_project 11 54900798 54907941 + MGP_CBAJ_P0028631 protein_coding protein_coding MGP_CBAJ_T0003119.1 MGP_CBAJ_G0002896.1 mouse_genomes_project 11 66191041 66191864 + Gm12272 antisense antisense MGP_CBAJ_T0032706.1 MGP_CBAJ_G0019026.1 mouse_genomes_project 11 117715105 117733148 + MGP_CBAJ_P0032706 Prr29 protein_coding protein_coding MGP_CBAJ_T0032707.1 MGP_CBAJ_G0019026.1 mouse_genomes_project 11 117730853 117733130 + MGP_CBAJ_P0032707 Prr29 protein_coding protein_coding MGP_CBAJ_T0032708.1 MGP_CBAJ_G0019026.1 mouse_genomes_project 11 117730872 117733276 + MGP_CBAJ_P0032708 Prr29 protein_coding protein_coding MGP_CBAJ_T0032709.1 MGP_CBAJ_G0019026.1 mouse_genomes_project 11 117730872 117733191 + MGP_CBAJ_P0032709 Prr29 protein_coding protein_coding MGP_CBAJ_T0032710.1 MGP_CBAJ_G0019026.1 mouse_genomes_project 11 117730872 117733382 + MGP_CBAJ_P0032710 Prr29 protein_coding protein_coding MGP_CBAJ_T0032711.1 MGP_CBAJ_G0019026.1 mouse_genomes_project 11 117730872 117733592 + MGP_CBAJ_P0032711 Prr29 protein_coding protein_coding MGP_CBAJ_T0031896.1 MGP_CBAJ_G0018814.1 mouse_genomes_project 11 109509941 109519271 - Krt26 protein_coding processed_transcript MGP_CBAJ_T0031897.1 MGP_CBAJ_G0018814.1 mouse_genomes_project 11 109510005 109519272 - MGP_CBAJ_P0031897 Krt26 protein_coding protein_coding MGP_CBAJ_T0003074.1 MGP_CBAJ_G0002857.1 mouse_genomes_project 11 45291690 45344424 - Gm12147 antisense antisense MGP_CBAJ_T0003259.1 MGP_CBAJ_G0003010.1 mouse_genomes_project 11 121133349 121147250 - Gm11696 antisense antisense MGP_CBAJ_T0003260.1 MGP_CBAJ_G0003010.1 mouse_genomes_project 11 121134285 121134938 - Gm11696 antisense antisense MGP_CBAJ_T0003261.1 MGP_CBAJ_G0003010.1 mouse_genomes_project 11 121136165 121147694 - Gm11696 antisense antisense MGP_CBAJ_T0003262.1 MGP_CBAJ_G0003010.1 mouse_genomes_project 11 121136559 121147283 - Gm11696 antisense antisense MGP_CBAJ_T0031069.1 MGP_CBAJ_G0018611.1 mouse_genomes_project 11 94051248 94197574 - MGP_CBAJ_P0031069 Brip1 protein_coding protein_coding MGP_CBAJ_T0031070.1 MGP_CBAJ_G0018611.1 mouse_genomes_project 11 94191416 94197545 - Brip1 protein_coding processed_transcript MGP_CBAJ_T0031071.1 MGP_CBAJ_G0018611.1 mouse_genomes_project 11 94192082 94197547 - Brip1 protein_coding processed_transcript MGP_CBAJ_T0003257.1 MGP_CBAJ_G0003008.1 mouse_genomes_project 11 120199866 120205487 - Cep112os1 antisense antisense MGP_CBAJ_T0012559.1 MGP_CBAJ_G0010671.1 mouse_genomes_project 11 101795926 101796507 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0028296.1 MGP_CBAJ_G0017904.1 mouse_genomes_project 11 45783811 45810256 + MGP_CBAJ_P0028296 Pwwp2a protein_coding protein_coding MGP_CBAJ_T0028297.1 MGP_CBAJ_G0017904.1 mouse_genomes_project 11 45783871 45823460 + MGP_CBAJ_P0028297 Pwwp2a protein_coding protein_coding MGP_CBAJ_T0028298.1 MGP_CBAJ_G0017904.1 mouse_genomes_project 11 45784361 45785865 + Pwwp2a protein_coding processed_transcript MGP_CBAJ_T0028299.1 MGP_CBAJ_G0017904.1 mouse_genomes_project 11 45785955 45810256 + MGP_CBAJ_P0028299 Pwwp2a protein_coding protein_coding MGP_CBAJ_T0028300.1 MGP_CBAJ_G0017904.1 mouse_genomes_project 11 45808352 45824540 + Pwwp2a protein_coding processed_transcript MGP_CBAJ_T0028301.1 MGP_CBAJ_G0017904.1 mouse_genomes_project 11 45820703 45823881 + Pwwp2a protein_coding processed_transcript MGP_CBAJ_T0030531.1 MGP_CBAJ_G0018474.1 mouse_genomes_project 11 84402406 84407223 - MGP_CBAJ_P0030531 Gm10392 protein_coding protein_coding MGP_CBAJ_T0031457.1 MGP_CBAJ_G0018705.1 mouse_genomes_project 11 104617693 104625462 + MGP_CBAJ_P0031457 Tac4 protein_coding protein_coding MGP_CBAJ_T0003213.1 MGP_CBAJ_G0002971.1 mouse_genomes_project 11 108578082 108578865 + antisense antisense MGP_CBAJ_T0030216.1 MGP_CBAJ_G0018386.1 mouse_genomes_project 11 79626147 79650761 + MGP_CBAJ_P0030216 Spata22 protein_coding protein_coding MGP_CBAJ_T0030217.1 MGP_CBAJ_G0018386.1 mouse_genomes_project 11 79626147 79662910 + MGP_CBAJ_P0030217 Spata22 protein_coding protein_coding MGP_CBAJ_T0012587.1 MGP_CBAJ_G0010699.1 mouse_genomes_project 11 114884832 114885161 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0029174.1 MGP_CBAJ_G0018160.1 mouse_genomes_project 11 65775589 65798860 - MGP_CBAJ_P0029174 Usp22 protein_coding protein_coding MGP_CBAJ_T0029175.1 MGP_CBAJ_G0018160.1 mouse_genomes_project 11 65777823 65781197 - Usp22 protein_coding retained_intron MGP_CBAJ_T0029176.1 MGP_CBAJ_G0018160.1 mouse_genomes_project 11 65779514 65783189 - Usp22 protein_coding retained_intron MGP_CBAJ_T0029177.1 MGP_CBAJ_G0018160.1 mouse_genomes_project 11 65785199 65792080 - MGP_CBAJ_P0029177 Usp22 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029178.1 MGP_CBAJ_G0018160.1 mouse_genomes_project 11 65786576 65798834 - Usp22 protein_coding retained_intron MGP_CBAJ_T0028029.1 MGP_CBAJ_G0017836.1 mouse_genomes_project 11 29821078 29828139 + MGP_CBAJ_P0028029 Mtif2 protein_coding protein_coding MGP_CBAJ_T0028030.1 MGP_CBAJ_G0017836.1 mouse_genomes_project 11 29821106 29828658 + MGP_CBAJ_P0028030 Mtif2 protein_coding protein_coding MGP_CBAJ_T0028031.1 MGP_CBAJ_G0017836.1 mouse_genomes_project 11 29821117 29824907 + Mtif2 protein_coding processed_transcript MGP_CBAJ_T0028032.1 MGP_CBAJ_G0017836.1 mouse_genomes_project 11 29821118 29844122 + MGP_CBAJ_P0028032 Mtif2 protein_coding protein_coding MGP_CBAJ_T0028033.1 MGP_CBAJ_G0017836.1 mouse_genomes_project 11 29821120 29834922 + MGP_CBAJ_P0028033 Mtif2 protein_coding protein_coding MGP_CBAJ_T0028034.1 MGP_CBAJ_G0017836.1 mouse_genomes_project 11 29821127 29844090 + MGP_CBAJ_P0028034 Mtif2 protein_coding protein_coding MGP_CBAJ_T0028035.1 MGP_CBAJ_G0017836.1 mouse_genomes_project 11 29828031 29835029 + MGP_CBAJ_P0028035 Mtif2 protein_coding protein_coding MGP_CBAJ_T0028036.1 MGP_CBAJ_G0017836.1 mouse_genomes_project 11 29834727 29836779 + Mtif2 protein_coding processed_transcript MGP_CBAJ_T0009606.1 MGP_CBAJ_G0007744.1 mouse_genomes_project 11 93738262 93738349 - Mir5110 miRNA miRNA MGP_CBAJ_T0030724.1 MGP_CBAJ_G0018518.1 mouse_genomes_project 11 86129976 86285946 - MGP_CBAJ_P0030724 Ksr1 protein_coding unknown_likely_coding MGP_CBAJ_T0030725.1 MGP_CBAJ_G0018518.1 mouse_genomes_project 11 86129985 86286104 - MGP_CBAJ_P0030725 Ksr1 protein_coding protein_coding MGP_CBAJ_T0030726.1 MGP_CBAJ_G0018518.1 mouse_genomes_project 11 86147103 86286104 - MGP_CBAJ_P0030726 Ksr1 protein_coding protein_coding MGP_CBAJ_T0030727.1 MGP_CBAJ_G0018518.1 mouse_genomes_project 11 86169708 86184664 - MGP_CBAJ_P0030727 Ksr1 protein_coding protein_coding MGP_CBAJ_T0030728.1 MGP_CBAJ_G0018518.1 mouse_genomes_project 11 86169971 86182416 - MGP_CBAJ_P0030728 Ksr1 protein_coding protein_coding MGP_CBAJ_T0101535.1 MGP_CBAJ_G0039567.1 mouse_genomes_project 11 54065199 54066154 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0028759.1 MGP_CBAJ_G0018033.1 mouse_genomes_project 11 57507761 57557521 - MGP_CBAJ_P0028759 Slc22a5 protein_coding protein_coding MGP_CBAJ_T0032184.1 MGP_CBAJ_G0018915.1 mouse_genomes_project 11 111858268 111865033 + MGP_CBAJ_P0032184 Aoc2 protein_coding protein_coding MGP_CBAJ_T0032185.1 MGP_CBAJ_G0018915.1 mouse_genomes_project 11 111858292 111864878 + MGP_CBAJ_P0032185 Aoc2 protein_coding protein_coding MGP_CBAJ_T0032923.1 MGP_CBAJ_G0019070.1 mouse_genomes_project 11 125897791 125906087 + MGP_CBAJ_P0032923 Sstr2 protein_coding protein_coding MGP_CBAJ_T0032924.1 MGP_CBAJ_G0019070.1 mouse_genomes_project 11 125897925 125905957 + MGP_CBAJ_P0032924 Sstr2 protein_coding protein_coding MGP_CBAJ_T0032925.1 MGP_CBAJ_G0019070.1 mouse_genomes_project 11 125904318 125905698 + MGP_CBAJ_P0032925 Sstr2 protein_coding protein_coding MGP_CBAJ_T0032514.1 MGP_CBAJ_G0018978.1 mouse_genomes_project 11 114085172 114114473 + MGP_CBAJ_P0032514 Fmnl1 protein_coding protein_coding MGP_CBAJ_T0032515.1 MGP_CBAJ_G0018978.1 mouse_genomes_project 11 114085378 114114467 + MGP_CBAJ_P0032515 Fmnl1 protein_coding protein_coding MGP_CBAJ_T0032516.1 MGP_CBAJ_G0018978.1 mouse_genomes_project 11 114085378 114114480 + MGP_CBAJ_P0032516 Fmnl1 protein_coding unknown_likely_coding MGP_CBAJ_T0032517.1 MGP_CBAJ_G0018978.1 mouse_genomes_project 11 114094816 114105920 + Fmnl1 protein_coding processed_transcript MGP_CBAJ_T0032518.1 MGP_CBAJ_G0018978.1 mouse_genomes_project 11 114100965 114106210 + Fmnl1 protein_coding processed_transcript MGP_CBAJ_T0032519.1 MGP_CBAJ_G0018978.1 mouse_genomes_project 11 114107873 114114467 + Fmnl1 protein_coding retained_intron MGP_CBAJ_T0032520.1 MGP_CBAJ_G0018978.1 mouse_genomes_project 11 114112367 114113443 + MGP_CBAJ_P0032520 Fmnl1 protein_coding protein_coding MGP_CBAJ_T0009538.1 MGP_CBAJ_G0007676.1 mouse_genomes_project 11 23100409 23100500 - miRNA miRNA MGP_CBAJ_T0031915.1 MGP_CBAJ_G0018830.1 mouse_genomes_project 11 109805151 109805910 - MGP_CBAJ_P0031915 Krtap9-3 protein_coding protein_coding MGP_CBAJ_T0012485.1 MGP_CBAJ_G0010597.1 mouse_genomes_project 11 67100048 67100349 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006129.1 MGP_CBAJ_G0005111.1 mouse_genomes_project 11 35969832 35972025 + Gm12711 lincRNA lincRNA MGP_CBAJ_T0029032.1 MGP_CBAJ_G0018131.1 mouse_genomes_project 11 64078529 64149464 + Mprip protein_coding processed_transcript MGP_CBAJ_T0029033.1 MGP_CBAJ_G0018131.1 mouse_genomes_project 11 64081644 64208023 + MGP_CBAJ_P0029033 Mprip protein_coding protein_coding MGP_CBAJ_T0029034.1 MGP_CBAJ_G0018131.1 mouse_genomes_project 11 64149284 64203681 + MGP_CBAJ_P0029034 Mprip protein_coding protein_coding MGP_CBAJ_T0029035.1 MGP_CBAJ_G0018131.1 mouse_genomes_project 11 64162790 64174481 + Mprip protein_coding processed_transcript MGP_CBAJ_T0029036.1 MGP_CBAJ_G0018131.1 mouse_genomes_project 11 64163115 64208024 + MGP_CBAJ_P0029036 Mprip protein_coding unknown_likely_coding MGP_CBAJ_T0029037.1 MGP_CBAJ_G0018131.1 mouse_genomes_project 11 64185700 64203302 + MGP_CBAJ_P0029037 Mprip protein_coding protein_coding MGP_CBAJ_T0030946.1 MGP_CBAJ_G0018584.1 mouse_genomes_project 11 91433368 91435702 + MGP_CBAJ_P0030946 Wfdc18 protein_coding protein_coding MGP_CBAJ_T0030947.1 MGP_CBAJ_G0018584.1 mouse_genomes_project 11 91433476 91435693 + MGP_CBAJ_P0030947 Wfdc18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030948.1 MGP_CBAJ_G0018584.1 mouse_genomes_project 11 91433478 91435052 + Wfdc18 protein_coding retained_intron MGP_CBAJ_T0029933.1 MGP_CBAJ_G0018326.1 mouse_genomes_project 11 76500916 76501973 + Psmb6 protein_coding retained_intron MGP_CBAJ_T0029934.1 MGP_CBAJ_G0018326.1 mouse_genomes_project 11 76500935 76503198 + MGP_CBAJ_P0029934 Psmb6 protein_coding protein_coding MGP_CBAJ_T0029935.1 MGP_CBAJ_G0018326.1 mouse_genomes_project 11 76501658 76502742 + Psmb6 protein_coding retained_intron MGP_CBAJ_T0029936.1 MGP_CBAJ_G0018326.1 mouse_genomes_project 11 76502620 76503407 + Psmb6 protein_coding retained_intron MGP_CBAJ_T0009541.1 MGP_CBAJ_G0007679.1 mouse_genomes_project 11 26076233 26076342 + Mir6372 miRNA miRNA MGP_CBAJ_T0003246.1 MGP_CBAJ_G0002998.1 mouse_genomes_project 11 117447528 117448512 - Gm11672 antisense antisense MGP_CBAJ_T0033001.1 MGP_CBAJ_G0019089.1 mouse_genomes_project 11 127478269 127482886 - MGP_CBAJ_P0033001 protein_coding protein_coding MGP_CBAJ_T0027577.1 MGP_CBAJ_G0017729.1 mouse_genomes_project 11 2693804 2879483 - MGP_CBAJ_P0027577 Znrf3 protein_coding protein_coding MGP_CBAJ_T0027578.1 MGP_CBAJ_G0017729.1 mouse_genomes_project 11 2696086 2811989 - MGP_CBAJ_P0027578 Znrf3 protein_coding protein_coding MGP_CBAJ_T0027579.1 MGP_CBAJ_G0017729.1 mouse_genomes_project 11 2706281 2879483 - MGP_CBAJ_P0027579 Znrf3 protein_coding protein_coding MGP_CBAJ_T0098726.1 MGP_CBAJ_G0036981.1 mouse_genomes_project 11 108962414 108962518 - Gm23640 snRNA snRNA MGP_CBAJ_T0029374.1 MGP_CBAJ_G0018198.1 mouse_genomes_project 11 69474512 69476010 - MGP_CBAJ_P0029374 protein_coding protein_coding MGP_CBAJ_T0011170.1 MGP_CBAJ_G0009308.1 mouse_genomes_project 11 16400118 16400442 + Gm23959 misc_RNA misc_RNA MGP_CBAJ_T0029786.1 MGP_CBAJ_G0018295.1 mouse_genomes_project 11 75801528 75809387 + MGP_CBAJ_P0029786 Ybx2 protein_coding protein_coding MGP_CBAJ_T0029787.1 MGP_CBAJ_G0018295.1 mouse_genomes_project 11 75801880 75809380 + MGP_CBAJ_P0029787 Ybx2 protein_coding protein_coding MGP_CBAJ_T0029788.1 MGP_CBAJ_G0018295.1 mouse_genomes_project 11 75807629 75808445 + Ybx2 protein_coding retained_intron MGP_CBAJ_T0029789.1 MGP_CBAJ_G0018295.1 mouse_genomes_project 11 75808326 75809378 + Ybx2 protein_coding retained_intron MGP_CBAJ_T0030896.1 MGP_CBAJ_G0018564.1 mouse_genomes_project 11 90702552 90710357 + MGP_CBAJ_P0030896 Slfn2 protein_coding protein_coding MGP_CBAJ_T0012495.1 MGP_CBAJ_G0010607.1 mouse_genomes_project 11 74797581 74797752 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012445.1 MGP_CBAJ_G0010557.1 mouse_genomes_project 11 54265172 54266411 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006122.1 MGP_CBAJ_G0005104.1 mouse_genomes_project 11 32446317 32451903 + Gm12107 lincRNA lincRNA MGP_CBAJ_T0028129.1 MGP_CBAJ_G0017858.1 mouse_genomes_project 11 32928086 32933604 + MGP_CBAJ_P0028129 Mpg protein_coding nonsense_mediated_decay MGP_CBAJ_T0028130.1 MGP_CBAJ_G0017858.1 mouse_genomes_project 11 32928092 32934282 + MGP_CBAJ_P0028130 Mpg protein_coding protein_coding MGP_CBAJ_T0028131.1 MGP_CBAJ_G0017858.1 mouse_genomes_project 11 32928111 32929979 + Mpg protein_coding retained_intron MGP_CBAJ_T0028132.1 MGP_CBAJ_G0017858.1 mouse_genomes_project 11 32928120 32932826 + MGP_CBAJ_P0028132 Mpg protein_coding nonsense_mediated_decay MGP_CBAJ_T0033518.1 MGP_CBAJ_G0019190.1 mouse_genomes_project 11 131491706 131941633 - MGP_CBAJ_P0033518 Rbfox3 protein_coding protein_coding MGP_CBAJ_T0033519.1 MGP_CBAJ_G0019190.1 mouse_genomes_project 11 131491708 131776638 - MGP_CBAJ_P0033519 Rbfox3 protein_coding protein_coding MGP_CBAJ_T0033520.1 MGP_CBAJ_G0019190.1 mouse_genomes_project 11 131493099 131941645 - MGP_CBAJ_P0033520 Rbfox3 protein_coding protein_coding MGP_CBAJ_T0033521.1 MGP_CBAJ_G0019190.1 mouse_genomes_project 11 131493099 131946552 - MGP_CBAJ_P0033521 Rbfox3 protein_coding protein_coding MGP_CBAJ_T0033522.1 MGP_CBAJ_G0019190.1 mouse_genomes_project 11 131493147 131941633 - MGP_CBAJ_P0033522 Rbfox3 protein_coding protein_coding MGP_CBAJ_T0033523.1 MGP_CBAJ_G0019190.1 mouse_genomes_project 11 131493938 131941635 - MGP_CBAJ_P0033523 Rbfox3 protein_coding protein_coding MGP_CBAJ_T0033524.1 MGP_CBAJ_G0019190.1 mouse_genomes_project 11 131498445 131509300 - MGP_CBAJ_P0033524 Rbfox3 protein_coding protein_coding MGP_CBAJ_T0033525.1 MGP_CBAJ_G0019190.1 mouse_genomes_project 11 131504788 131577205 - MGP_CBAJ_P0033525 Rbfox3 protein_coding protein_coding MGP_CBAJ_T0033526.1 MGP_CBAJ_G0019190.1 mouse_genomes_project 11 131836944 131920789 - Rbfox3 protein_coding processed_transcript MGP_CBAJ_T0033527.1 MGP_CBAJ_G0019190.1 mouse_genomes_project 11 131836946 131940088 - Rbfox3 protein_coding processed_transcript MGP_CBAJ_T0016969.1 MGP_CBAJ_G0014930.1 mouse_genomes_project 11 91283672 91333070 + E230016K23Rik processed_transcript processed_transcript MGP_CBAJ_T0016970.1 MGP_CBAJ_G0014930.1 mouse_genomes_project 11 91283700 91306333 + E230016K23Rik processed_transcript processed_transcript MGP_CBAJ_T0016971.1 MGP_CBAJ_G0014930.1 mouse_genomes_project 11 91331038 91332280 + E230016K23Rik processed_transcript processed_transcript MGP_CBAJ_T0032606.1 MGP_CBAJ_G0019000.1 mouse_genomes_project 11 116245942 116282122 + MGP_CBAJ_P0032606 Efcab3 protein_coding protein_coding MGP_CBAJ_T0032607.1 MGP_CBAJ_G0019000.1 mouse_genomes_project 11 116252308 116299454 + MGP_CBAJ_P0032607 Efcab3 protein_coding protein_coding MGP_CBAJ_T0032608.1 MGP_CBAJ_G0019000.1 mouse_genomes_project 11 116285251 116317709 + MGP_CBAJ_P0032608 Efcab3 protein_coding protein_coding MGP_CBAJ_T0032609.1 MGP_CBAJ_G0019000.1 mouse_genomes_project 11 116312222 116317707 + Efcab3 protein_coding processed_transcript MGP_CBAJ_T0030534.1 MGP_CBAJ_G0018476.1 mouse_genomes_project 11 84622783 84652853 + MGP_CBAJ_P0030534 Nufip2 protein_coding protein_coding MGP_CBAJ_T0030535.1 MGP_CBAJ_G0018476.1 mouse_genomes_project 11 84622800 84688652 + MGP_CBAJ_P0030535 Nufip2 protein_coding protein_coding MGP_CBAJ_T0030536.1 MGP_CBAJ_G0018476.1 mouse_genomes_project 11 84624087 84630236 + Nufip2 protein_coding processed_transcript MGP_CBAJ_T0030537.1 MGP_CBAJ_G0018476.1 mouse_genomes_project 11 84624229 84630034 + Nufip2 protein_coding processed_transcript MGP_CBAJ_T0017004.1 MGP_CBAJ_G0014952.1 mouse_genomes_project 11 115652740 115666635 - processed_transcript processed_transcript MGP_CBAJ_T0030704.1 MGP_CBAJ_G0018511.1 mouse_genomes_project 11 85640507 85645885 + MGP_CBAJ_P0030704 Ift20 protein_coding protein_coding MGP_CBAJ_T0030705.1 MGP_CBAJ_G0018511.1 mouse_genomes_project 11 85640574 85645523 + MGP_CBAJ_P0030705 Ift20 protein_coding protein_coding MGP_CBAJ_T0030706.1 MGP_CBAJ_G0018511.1 mouse_genomes_project 11 85640589 85645629 + MGP_CBAJ_P0030706 Ift20 protein_coding protein_coding MGP_CBAJ_T0030707.1 MGP_CBAJ_G0018511.1 mouse_genomes_project 11 85640591 85645629 + Ift20 protein_coding retained_intron MGP_CBAJ_T0030708.1 MGP_CBAJ_G0018511.1 mouse_genomes_project 11 85640619 85645629 + Ift20 protein_coding retained_intron MGP_CBAJ_T0012511.1 MGP_CBAJ_G0010623.1 mouse_genomes_project 11 79695810 79696197 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006225.1 MGP_CBAJ_G0005187.1 mouse_genomes_project 11 97870750 97877270 + Gm2018 lincRNA lincRNA MGP_CBAJ_T0030974.1 MGP_CBAJ_G0018591.1 mouse_genomes_project 11 91839618 91890515 - MGP_CBAJ_P0030974 Tada2a protein_coding protein_coding MGP_CBAJ_T0030975.1 MGP_CBAJ_G0018591.1 mouse_genomes_project 11 91840230 91843651 - Tada2a protein_coding processed_transcript MGP_CBAJ_T0030976.1 MGP_CBAJ_G0018591.1 mouse_genomes_project 11 91840331 91854467 - MGP_CBAJ_P0030976 Tada2a protein_coding protein_coding MGP_CBAJ_T0030977.1 MGP_CBAJ_G0018591.1 mouse_genomes_project 11 91842732 91848138 - Tada2a protein_coding processed_transcript MGP_CBAJ_T0030978.1 MGP_CBAJ_G0018591.1 mouse_genomes_project 11 91846109 91848190 - Tada2a protein_coding processed_transcript MGP_CBAJ_T0033846.1 MGP_CBAJ_G0019252.1 mouse_genomes_project 11 134299325 134309374 + MGP_CBAJ_P0033846 Slc16a3 protein_coding protein_coding MGP_CBAJ_T0033847.1 MGP_CBAJ_G0019252.1 mouse_genomes_project 11 134299898 134307346 + MGP_CBAJ_P0033847 Slc16a3 protein_coding protein_coding MGP_CBAJ_T0033848.1 MGP_CBAJ_G0019252.1 mouse_genomes_project 11 134299912 134309599 + MGP_CBAJ_P0033848 Slc16a3 protein_coding protein_coding MGP_CBAJ_T0033849.1 MGP_CBAJ_G0019252.1 mouse_genomes_project 11 134299916 134307460 + MGP_CBAJ_P0033849 Slc16a3 protein_coding protein_coding MGP_CBAJ_T0033850.1 MGP_CBAJ_G0019252.1 mouse_genomes_project 11 134299926 134311467 + MGP_CBAJ_P0033850 Slc16a3 protein_coding protein_coding MGP_CBAJ_T0033851.1 MGP_CBAJ_G0019252.1 mouse_genomes_project 11 134301533 134305872 + MGP_CBAJ_P0033851 Slc16a3 protein_coding protein_coding MGP_CBAJ_T0033852.1 MGP_CBAJ_G0019252.1 mouse_genomes_project 11 134301983 134304811 + Slc16a3 protein_coding processed_transcript MGP_CBAJ_T0033853.1 MGP_CBAJ_G0019252.1 mouse_genomes_project 11 134305824 134306830 + Slc16a3 protein_coding retained_intron MGP_CBAJ_T0006274.1 MGP_CBAJ_G0005223.1 mouse_genomes_project 11 128994588 128997235 + Gm26730 lincRNA lincRNA MGP_CBAJ_T0032699.1 MGP_CBAJ_G0019022.1 mouse_genomes_project 11 117616331 117627813 + MGP_CBAJ_P0032699 Tcam1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032700.1 MGP_CBAJ_G0019022.1 mouse_genomes_project 11 117616407 117628425 + MGP_CBAJ_P0032700 Tcam1 protein_coding protein_coding MGP_CBAJ_T0003192.1 MGP_CBAJ_G0002953.1 mouse_genomes_project 11 104375072 104380504 + Gm11513 antisense antisense MGP_CBAJ_T0097754.1 MGP_CBAJ_G0036027.1 mouse_genomes_project 11 46872602 46873026 + pseudogene pseudogene MGP_CBAJ_T0030499.1 MGP_CBAJ_G0018468.1 mouse_genomes_project 11 84067856 84257495 + MGP_CBAJ_P0030499 Ssh2 protein_coding protein_coding MGP_CBAJ_T0030500.1 MGP_CBAJ_G0018468.1 mouse_genomes_project 11 84067856 84331203 + MGP_CBAJ_P0030500 Ssh2 protein_coding protein_coding MGP_CBAJ_T0030501.1 MGP_CBAJ_G0018468.1 mouse_genomes_project 11 84207857 84211291 + Ssh2 protein_coding retained_intron MGP_CBAJ_T0030502.1 MGP_CBAJ_G0018468.1 mouse_genomes_project 11 84209382 84280801 + Ssh2 protein_coding processed_transcript MGP_CBAJ_T0030503.1 MGP_CBAJ_G0018468.1 mouse_genomes_project 11 84209384 84326515 + MGP_CBAJ_P0030503 Ssh2 protein_coding protein_coding MGP_CBAJ_T0030504.1 MGP_CBAJ_G0018468.1 mouse_genomes_project 11 84209390 84299323 + Ssh2 protein_coding retained_intron MGP_CBAJ_T0030505.1 MGP_CBAJ_G0018468.1 mouse_genomes_project 11 84255778 84258345 + Ssh2 protein_coding retained_intron MGP_CBAJ_T0028585.1 MGP_CBAJ_G0017988.1 mouse_genomes_project 11 54124873 54135048 + MGP_CBAJ_P0028585 Olfr1375 protein_coding protein_coding MGP_CBAJ_T0030894.1 MGP_CBAJ_G0018562.1 mouse_genomes_project 11 90554916 90568424 - MGP_CBAJ_P0030894 Slfn9 protein_coding protein_coding MGP_CBAJ_T0030472.1 MGP_CBAJ_G0018462.1 mouse_genomes_project 11 83575823 83640184 - MGP_CBAJ_P0030472 Cpd protein_coding protein_coding MGP_CBAJ_T0030473.1 MGP_CBAJ_G0018462.1 mouse_genomes_project 11 83583112 83587990 - Cpd protein_coding retained_intron MGP_CBAJ_T0030474.1 MGP_CBAJ_G0018462.1 mouse_genomes_project 11 83605751 83608866 - Cpd protein_coding retained_intron MGP_CBAJ_T0003131.1 MGP_CBAJ_G0002907.1 mouse_genomes_project 11 67851408 67865060 - Cdrt4os1 antisense antisense MGP_CBAJ_T0003132.1 MGP_CBAJ_G0002907.1 mouse_genomes_project 11 67860047 67865066 - Cdrt4os1 antisense antisense MGP_CBAJ_T0099911.1 MGP_CBAJ_G0038166.1 mouse_genomes_project 11 24998868 24998996 - Gm24255 snoRNA snoRNA MGP_CBAJ_T0032854.1 MGP_CBAJ_G0019054.1 mouse_genomes_project 11 121247190 121276928 - MGP_CBAJ_P0032854 Slc16a6 protein_coding protein_coding MGP_CBAJ_T0032855.1 MGP_CBAJ_G0019054.1 mouse_genomes_project 11 121249096 121276624 - MGP_CBAJ_P0032855 Slc16a6 protein_coding protein_coding MGP_CBAJ_T0032856.1 MGP_CBAJ_G0019054.1 mouse_genomes_project 11 121258927 121276018 - MGP_CBAJ_P0032856 Slc16a6 protein_coding protein_coding MGP_CBAJ_T0032857.1 MGP_CBAJ_G0019054.1 mouse_genomes_project 11 121270036 121276529 - Slc16a6 protein_coding processed_transcript MGP_CBAJ_T0011670.1 MGP_CBAJ_G0009805.1 mouse_genomes_project 11 79750782 79751716 - MGP_CBAJ_P0011670 Olfr379-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0031443.1 MGP_CBAJ_G0018701.1 mouse_genomes_project 11 104368594 104383568 - MGP_CBAJ_P0031443 Pdk2 protein_coding protein_coding MGP_CBAJ_T0031444.1 MGP_CBAJ_G0018701.1 mouse_genomes_project 11 104369305 104370933 - Pdk2 protein_coding processed_transcript MGP_CBAJ_T0031445.1 MGP_CBAJ_G0018701.1 mouse_genomes_project 11 104371084 104371770 - Pdk2 protein_coding processed_transcript MGP_CBAJ_T0031446.1 MGP_CBAJ_G0018701.1 mouse_genomes_project 11 104371999 104382773 - Pdk2 protein_coding processed_transcript MGP_CBAJ_T0031447.1 MGP_CBAJ_G0018701.1 mouse_genomes_project 11 104374227 104383089 - Pdk2 protein_coding processed_transcript MGP_CBAJ_T0031083.1 MGP_CBAJ_G0018613.1 mouse_genomes_project 11 94279137 94375838 - MGP_CBAJ_P0031083 Med13 protein_coding protein_coding MGP_CBAJ_T0031084.1 MGP_CBAJ_G0018613.1 mouse_genomes_project 11 94284636 94290743 - Med13 protein_coding processed_transcript MGP_CBAJ_T0031085.1 MGP_CBAJ_G0018613.1 mouse_genomes_project 11 94287463 94291135 - Med13 protein_coding retained_intron MGP_CBAJ_T0031086.1 MGP_CBAJ_G0018613.1 mouse_genomes_project 11 94345567 94346745 - Med13 protein_coding retained_intron MGP_CBAJ_T0033625.1 MGP_CBAJ_G0019209.1 mouse_genomes_project 11 133280957 133309534 - MGP_CBAJ_P0033625 Cep131 protein_coding protein_coding MGP_CBAJ_T0033626.1 MGP_CBAJ_G0019209.1 mouse_genomes_project 11 133280961 133281496 - Cep131 protein_coding processed_transcript MGP_CBAJ_T0033627.1 MGP_CBAJ_G0019209.1 mouse_genomes_project 11 133281166 133284597 - Cep131 protein_coding processed_transcript MGP_CBAJ_T0033628.1 MGP_CBAJ_G0019209.1 mouse_genomes_project 11 133283672 133287465 - Cep131 protein_coding processed_transcript MGP_CBAJ_T0033629.1 MGP_CBAJ_G0019209.1 mouse_genomes_project 11 133284628 133288580 - Cep131 protein_coding processed_transcript MGP_CBAJ_T0031357.1 MGP_CBAJ_G0018680.1 mouse_genomes_project 11 103534119 103551450 + MGP_CBAJ_P0031357 Ankrd40 protein_coding protein_coding MGP_CBAJ_T0031358.1 MGP_CBAJ_G0018680.1 mouse_genomes_project 11 103534119 103553787 + MGP_CBAJ_P0031358 Ankrd40 protein_coding protein_coding MGP_CBAJ_T0031359.1 MGP_CBAJ_G0018680.1 mouse_genomes_project 11 103550234 103552089 + Ankrd40 protein_coding retained_intron MGP_CBAJ_T0032432.1 MGP_CBAJ_G0018961.1 mouse_genomes_project 11 113449553 113465145 + MGP_CBAJ_P0032432 Meioc protein_coding protein_coding MGP_CBAJ_T0032433.1 MGP_CBAJ_G0018961.1 mouse_genomes_project 11 113451455 113472097 + MGP_CBAJ_P0032433 Meioc protein_coding protein_coding MGP_CBAJ_T0032434.1 MGP_CBAJ_G0018961.1 mouse_genomes_project 11 113451490 113463961 + Meioc protein_coding processed_transcript MGP_CBAJ_T0012606.1 MGP_CBAJ_G0010718.1 mouse_genomes_project 11 124152665 124153481 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012392.1 MGP_CBAJ_G0010504.1 mouse_genomes_project 11 29609050 29609255 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099896.1 MGP_CBAJ_G0038151.1 mouse_genomes_project 11 2415180 2415277 + Gm24958 snoRNA snoRNA MGP_CBAJ_T0032292.1 MGP_CBAJ_G0018939.1 mouse_genomes_project 11 112744836 112781292 - MGP_CBAJ_P0032292 Mpp2 protein_coding protein_coding MGP_CBAJ_T0032293.1 MGP_CBAJ_G0018939.1 mouse_genomes_project 11 112745345 112775299 - MGP_CBAJ_P0032293 Mpp2 protein_coding protein_coding MGP_CBAJ_T0032294.1 MGP_CBAJ_G0018939.1 mouse_genomes_project 11 112749906 112775234 - Mpp2 protein_coding processed_transcript MGP_CBAJ_T0032295.1 MGP_CBAJ_G0018939.1 mouse_genomes_project 11 112752485 112778549 - Mpp2 protein_coding retained_intron MGP_CBAJ_T0032296.1 MGP_CBAJ_G0018939.1 mouse_genomes_project 11 112773468 112781244 - Mpp2 protein_coding processed_transcript MGP_CBAJ_T0032297.1 MGP_CBAJ_G0018939.1 mouse_genomes_project 11 112773522 112781232 - Mpp2 protein_coding processed_transcript MGP_CBAJ_T0033702.1 MGP_CBAJ_G0019224.1 mouse_genomes_project 11 133749932 133757617 + Hgs protein_coding processed_transcript MGP_CBAJ_T0033703.1 MGP_CBAJ_G0019224.1 mouse_genomes_project 11 133749932 133770440 + MGP_CBAJ_P0033703 Hgs protein_coding protein_coding MGP_CBAJ_T0033704.1 MGP_CBAJ_G0019224.1 mouse_genomes_project 11 133749932 133763188 + MGP_CBAJ_P0033704 Hgs protein_coding protein_coding MGP_CBAJ_T0033705.1 MGP_CBAJ_G0019224.1 mouse_genomes_project 11 133749932 133770435 + MGP_CBAJ_P0033705 Hgs protein_coding protein_coding MGP_CBAJ_T0033706.1 MGP_CBAJ_G0019224.1 mouse_genomes_project 11 133749932 133770435 + MGP_CBAJ_P0033706 Hgs protein_coding protein_coding MGP_CBAJ_T0033707.1 MGP_CBAJ_G0019224.1 mouse_genomes_project 11 133763370 133766043 + MGP_CBAJ_P0033707 Hgs protein_coding protein_coding MGP_CBAJ_T0003123.1 MGP_CBAJ_G0002900.1 mouse_genomes_project 11 67378759 67380666 - Gm12280 antisense antisense MGP_CBAJ_T0012466.1 MGP_CBAJ_G0010578.1 mouse_genomes_project 11 62017808 62018099 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0032602.1 MGP_CBAJ_G0018998.1 mouse_genomes_project 11 115719372 115775702 + MGP_CBAJ_P0032602 Itgb3 protein_coding protein_coding MGP_CBAJ_T0032603.1 MGP_CBAJ_G0018998.1 mouse_genomes_project 11 115748926 115775046 + Itgb3 protein_coding processed_transcript MGP_CBAJ_T0016995.1 MGP_CBAJ_G0014944.1 mouse_genomes_project 11 107980476 107981444 - Gm11632 processed_transcript processed_transcript MGP_CBAJ_T0101029.1 MGP_CBAJ_G0039263.1 mouse_genomes_project 11 130300702 130301781 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101030.1 MGP_CBAJ_G0039263.1 mouse_genomes_project 11 130300761 130301191 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0031090.1 MGP_CBAJ_G0018615.1 mouse_genomes_project 11 94539089 94592973 - MGP_CBAJ_P0031090 Rps6kb1 protein_coding protein_coding MGP_CBAJ_T0031091.1 MGP_CBAJ_G0018615.1 mouse_genomes_project 11 94542258 94592973 - Rps6kb1 protein_coding retained_intron MGP_CBAJ_T0031092.1 MGP_CBAJ_G0018615.1 mouse_genomes_project 11 94542822 94551964 - Rps6kb1 protein_coding processed_transcript MGP_CBAJ_T0031093.1 MGP_CBAJ_G0018615.1 mouse_genomes_project 11 94554028 94560448 - Rps6kb1 protein_coding processed_transcript MGP_CBAJ_T0031094.1 MGP_CBAJ_G0018615.1 mouse_genomes_project 11 94554393 94592942 - MGP_CBAJ_P0031094 Rps6kb1 protein_coding protein_coding MGP_CBAJ_T0031095.1 MGP_CBAJ_G0018615.1 mouse_genomes_project 11 94560052 94578436 - Rps6kb1 protein_coding retained_intron MGP_CBAJ_T0031096.1 MGP_CBAJ_G0018615.1 mouse_genomes_project 11 94578367 94592933 - MGP_CBAJ_P0031096 Rps6kb1 protein_coding protein_coding MGP_CBAJ_T0033298.1 MGP_CBAJ_G0019145.1 mouse_genomes_project 11 129018813 129023522 - MGP_CBAJ_P0033298 Foxj1 protein_coding protein_coding MGP_CBAJ_T0030567.1 MGP_CBAJ_G0018480.1 mouse_genomes_project 11 84847823 84863500 - MGP_CBAJ_P0030567 Pipox protein_coding protein_coding MGP_CBAJ_T0030568.1 MGP_CBAJ_G0018480.1 mouse_genomes_project 11 84848268 84849895 - Pipox protein_coding retained_intron MGP_CBAJ_T0030569.1 MGP_CBAJ_G0018480.1 mouse_genomes_project 11 84849827 84854061 - Pipox protein_coding processed_transcript MGP_CBAJ_T0027944.1 MGP_CBAJ_G0017817.1 mouse_genomes_project 11 23122535 23126211 - MGP_CBAJ_P0027944 1700093K21Rik protein_coding protein_coding MGP_CBAJ_T0027945.1 MGP_CBAJ_G0017817.1 mouse_genomes_project 11 23122535 23125492 - MGP_CBAJ_P0027945 1700093K21Rik protein_coding protein_coding MGP_CBAJ_T0027946.1 MGP_CBAJ_G0017817.1 mouse_genomes_project 11 23125056 23126211 - MGP_CBAJ_P0027946 1700093K21Rik protein_coding protein_coding MGP_CBAJ_T0027947.1 MGP_CBAJ_G0017817.1 mouse_genomes_project 11 23125085 23127427 - MGP_CBAJ_P0027947 1700093K21Rik protein_coding protein_coding MGP_CBAJ_T0033282.1 MGP_CBAJ_G0019142.1 mouse_genomes_project 11 128924923 128956889 - Srp68 protein_coding processed_transcript MGP_CBAJ_T0033283.1 MGP_CBAJ_G0019142.1 mouse_genomes_project 11 128924923 128956889 - MGP_CBAJ_P0033283 Srp68 protein_coding protein_coding MGP_CBAJ_T0033284.1 MGP_CBAJ_G0019142.1 mouse_genomes_project 11 128924923 128956807 - MGP_CBAJ_P0033284 Srp68 protein_coding protein_coding MGP_CBAJ_T0033285.1 MGP_CBAJ_G0019142.1 mouse_genomes_project 11 128928544 128941050 - Srp68 protein_coding processed_transcript MGP_CBAJ_T0003145.1 MGP_CBAJ_G0002917.1 mouse_genomes_project 11 74780432 74783192 - 9330160F10Rik antisense antisense MGP_CBAJ_T0033104.1 MGP_CBAJ_G0019114.1 mouse_genomes_project 11 128125320 128150965 + MGP_CBAJ_P0033104 Nup85 protein_coding protein_coding MGP_CBAJ_T0033105.1 MGP_CBAJ_G0019114.1 mouse_genomes_project 11 128125411 128130778 + Nup85 protein_coding processed_transcript MGP_CBAJ_T0033106.1 MGP_CBAJ_G0019114.1 mouse_genomes_project 11 128131001 128148823 + MGP_CBAJ_P0033106 Nup85 protein_coding protein_coding MGP_CBAJ_T0033107.1 MGP_CBAJ_G0019114.1 mouse_genomes_project 11 128145149 128149019 + MGP_CBAJ_P0033107 Nup85 protein_coding protein_coding MGP_CBAJ_T0033108.1 MGP_CBAJ_G0019114.1 mouse_genomes_project 11 128147483 128148399 + Nup85 protein_coding processed_transcript MGP_CBAJ_T0033109.1 MGP_CBAJ_G0019114.1 mouse_genomes_project 11 128148075 128149014 + Nup85 protein_coding processed_transcript MGP_CBAJ_T0033110.1 MGP_CBAJ_G0019114.1 mouse_genomes_project 11 128148620 128150886 + Nup85 protein_coding processed_transcript MGP_CBAJ_T0033111.1 MGP_CBAJ_G0019114.1 mouse_genomes_project 11 128148727 128149258 + Nup85 protein_coding processed_transcript MGP_CBAJ_T0033112.1 MGP_CBAJ_G0019114.1 mouse_genomes_project 11 128150036 128150763 + Nup85 protein_coding processed_transcript MGP_CBAJ_T0032058.1 MGP_CBAJ_G0018891.1 mouse_genomes_project 11 111226356 111252677 - MGP_CBAJ_P0032058 Stat5b protein_coding protein_coding MGP_CBAJ_T0032059.1 MGP_CBAJ_G0018891.1 mouse_genomes_project 11 111242813 111300913 - Stat5b protein_coding processed_transcript MGP_CBAJ_T0027907.1 MGP_CBAJ_G0017812.1 mouse_genomes_project 11 22516077 22529508 + MGP_CBAJ_P0027907 Cct4 protein_coding protein_coding MGP_CBAJ_T0027908.1 MGP_CBAJ_G0017812.1 mouse_genomes_project 11 22516184 22519988 + MGP_CBAJ_P0027908 Cct4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027909.1 MGP_CBAJ_G0017812.1 mouse_genomes_project 11 22516197 22525485 + Cct4 protein_coding retained_intron MGP_CBAJ_T0027910.1 MGP_CBAJ_G0017812.1 mouse_genomes_project 11 22516208 22522695 + MGP_CBAJ_P0027910 Cct4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027911.1 MGP_CBAJ_G0017812.1 mouse_genomes_project 11 22516208 22528760 + MGP_CBAJ_P0027911 Cct4 protein_coding protein_coding MGP_CBAJ_T0027912.1 MGP_CBAJ_G0017812.1 mouse_genomes_project 11 22516210 22522748 + MGP_CBAJ_P0027912 Cct4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027913.1 MGP_CBAJ_G0017812.1 mouse_genomes_project 11 22521222 22522700 + Cct4 protein_coding retained_intron MGP_CBAJ_T0027914.1 MGP_CBAJ_G0017812.1 mouse_genomes_project 11 22526545 22527228 + Cct4 protein_coding processed_transcript MGP_CBAJ_T0027915.1 MGP_CBAJ_G0017812.1 mouse_genomes_project 11 22527542 22528464 + Cct4 protein_coding retained_intron MGP_CBAJ_T0028650.1 MGP_CBAJ_G0018006.1 mouse_genomes_project 11 55324799 55358535 + MGP_CBAJ_P0028650 Cdkl3 protein_coding protein_coding MGP_CBAJ_T0028651.1 MGP_CBAJ_G0018006.1 mouse_genomes_project 11 55324799 55367083 + MGP_CBAJ_P0028651 Cdkl3 protein_coding protein_coding MGP_CBAJ_T0028652.1 MGP_CBAJ_G0018006.1 mouse_genomes_project 11 55324799 55364593 + MGP_CBAJ_P0028652 Cdkl3 protein_coding protein_coding MGP_CBAJ_T0028653.1 MGP_CBAJ_G0018006.1 mouse_genomes_project 11 55324799 55364593 + MGP_CBAJ_P0028653 Cdkl3 protein_coding protein_coding MGP_CBAJ_T0028654.1 MGP_CBAJ_G0018006.1 mouse_genomes_project 11 55324803 55353538 + MGP_CBAJ_P0028654 Cdkl3 protein_coding protein_coding MGP_CBAJ_T0028655.1 MGP_CBAJ_G0018006.1 mouse_genomes_project 11 55324819 55358602 + MGP_CBAJ_P0028655 Cdkl3 protein_coding protein_coding MGP_CBAJ_T0028656.1 MGP_CBAJ_G0018006.1 mouse_genomes_project 11 55324832 55340499 + MGP_CBAJ_P0028656 Cdkl3 protein_coding protein_coding MGP_CBAJ_T0028657.1 MGP_CBAJ_G0018006.1 mouse_genomes_project 11 55324843 55383706 + MGP_CBAJ_P0028657 Cdkl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028658.1 MGP_CBAJ_G0018006.1 mouse_genomes_project 11 55324868 55364593 + MGP_CBAJ_P0028658 Cdkl3 protein_coding protein_coding MGP_CBAJ_T0028659.1 MGP_CBAJ_G0018006.1 mouse_genomes_project 11 55324870 55414192 + MGP_CBAJ_P0028659 Cdkl3 protein_coding protein_coding MGP_CBAJ_T0028660.1 MGP_CBAJ_G0018006.1 mouse_genomes_project 11 55324896 55367087 + MGP_CBAJ_P0028660 Cdkl3 protein_coding protein_coding MGP_CBAJ_T0028661.1 MGP_CBAJ_G0018006.1 mouse_genomes_project 11 55352727 55414862 + MGP_CBAJ_P0028661 Cdkl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028662.1 MGP_CBAJ_G0018006.1 mouse_genomes_project 11 55352951 55358457 + MGP_CBAJ_P0028662 Cdkl3 protein_coding protein_coding MGP_CBAJ_T0028663.1 MGP_CBAJ_G0018006.1 mouse_genomes_project 11 55357094 55419531 + MGP_CBAJ_P0028663 Cdkl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028664.1 MGP_CBAJ_G0018006.1 mouse_genomes_project 11 55357179 55419537 + MGP_CBAJ_P0028664 Cdkl3 protein_coding protein_coding MGP_CBAJ_T0028665.1 MGP_CBAJ_G0018006.1 mouse_genomes_project 11 55358259 55419529 + MGP_CBAJ_P0028665 Cdkl3 protein_coding protein_coding MGP_CBAJ_T0028314.1 MGP_CBAJ_G0017909.1 mouse_genomes_project 11 46754331 46804303 + MGP_CBAJ_P0028314 Rnf145 protein_coding protein_coding MGP_CBAJ_T0028315.1 MGP_CBAJ_G0017909.1 mouse_genomes_project 11 46754350 46762213 + Rnf145 protein_coding processed_transcript MGP_CBAJ_T0028316.1 MGP_CBAJ_G0017909.1 mouse_genomes_project 11 46757303 46794201 + MGP_CBAJ_P0028316 Rnf145 protein_coding protein_coding MGP_CBAJ_T0028317.1 MGP_CBAJ_G0017909.1 mouse_genomes_project 11 46758166 46788152 + Rnf145 protein_coding processed_transcript MGP_CBAJ_T0028318.1 MGP_CBAJ_G0017909.1 mouse_genomes_project 11 46795828 46799041 + Rnf145 protein_coding processed_transcript MGP_CBAJ_T0028319.1 MGP_CBAJ_G0017909.1 mouse_genomes_project 11 46799022 46800985 + Rnf145 protein_coding processed_transcript MGP_CBAJ_T0006282.1 MGP_CBAJ_G0005228.1 mouse_genomes_project 11 130427052 130438767 + Gm11734 lincRNA lincRNA MGP_CBAJ_T0006149.1 MGP_CBAJ_G0005130.1 mouse_genomes_project 11 55256440 55651072 - lincRNA lincRNA MGP_CBAJ_T0029810.1 MGP_CBAJ_G0018299.1 mouse_genomes_project 11 75854376 75866240 + MGP_CBAJ_P0029810 Ctdnep1 protein_coding protein_coding MGP_CBAJ_T0029811.1 MGP_CBAJ_G0018299.1 mouse_genomes_project 11 75857146 75865751 + Ctdnep1 protein_coding retained_intron MGP_CBAJ_T0029812.1 MGP_CBAJ_G0018299.1 mouse_genomes_project 11 75865273 75866360 + Ctdnep1 protein_coding retained_intron MGP_CBAJ_T0029813.1 MGP_CBAJ_G0018299.1 mouse_genomes_project 11 75865293 75866605 + Ctdnep1 protein_coding processed_transcript MGP_CBAJ_T0029755.1 MGP_CBAJ_G0018289.1 mouse_genomes_project 11 75724950 75726285 - MGP_CBAJ_P0029755 Tmem95 protein_coding protein_coding MGP_CBAJ_T0028713.1 MGP_CBAJ_G0018021.1 mouse_genomes_project 11 57019950 57020681 - MGP_CBAJ_P0028713 Gm9837 protein_coding protein_coding MGP_CBAJ_T0003161.1 MGP_CBAJ_G0002931.1 mouse_genomes_project 11 86142448 86156032 + antisense antisense MGP_CBAJ_T0099899.1 MGP_CBAJ_G0038154.1 mouse_genomes_project 11 4208141 4208230 - Gm24000 snoRNA snoRNA MGP_CBAJ_T0003055.1 MGP_CBAJ_G0002841.1 mouse_genomes_project 11 16852919 16861750 + antisense antisense MGP_CBAJ_T0003056.1 MGP_CBAJ_G0002841.1 mouse_genomes_project 11 16852953 16854101 + antisense antisense MGP_CBAJ_T0098681.1 MGP_CBAJ_G0036936.1 mouse_genomes_project 11 41496334 41496479 + Gm24192 snRNA snRNA MGP_CBAJ_T0027859.1 MGP_CBAJ_G0017799.1 mouse_genomes_project 11 20355323 20412747 + Peli1 protein_coding retained_intron MGP_CBAJ_T0027860.1 MGP_CBAJ_G0017799.1 mouse_genomes_project 11 20355323 20420827 + MGP_CBAJ_P0027860 Peli1 protein_coding protein_coding MGP_CBAJ_T0027861.1 MGP_CBAJ_G0017799.1 mouse_genomes_project 11 20356154 20419913 + Peli1 protein_coding retained_intron MGP_CBAJ_T0027862.1 MGP_CBAJ_G0017799.1 mouse_genomes_project 11 20400860 20420827 + MGP_CBAJ_P0027862 Peli1 protein_coding protein_coding MGP_CBAJ_T0029762.1 MGP_CBAJ_G0018292.1 mouse_genomes_project 11 75758216 75761739 - MGP_CBAJ_P0029762 2810408A11Rik protein_coding protein_coding MGP_CBAJ_T0029763.1 MGP_CBAJ_G0018292.1 mouse_genomes_project 11 75758222 75761731 - MGP_CBAJ_P0029763 2810408A11Rik protein_coding protein_coding MGP_CBAJ_T0029764.1 MGP_CBAJ_G0018292.1 mouse_genomes_project 11 75758227 75761783 - MGP_CBAJ_P0029764 2810408A11Rik protein_coding protein_coding MGP_CBAJ_T0029765.1 MGP_CBAJ_G0018292.1 mouse_genomes_project 11 75758227 75761802 - MGP_CBAJ_P0029765 2810408A11Rik protein_coding protein_coding MGP_CBAJ_T0029766.1 MGP_CBAJ_G0018292.1 mouse_genomes_project 11 75758227 75761820 - MGP_CBAJ_P0029766 2810408A11Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0029767.1 MGP_CBAJ_G0018292.1 mouse_genomes_project 11 75758330 75761832 - 2810408A11Rik protein_coding retained_intron MGP_CBAJ_T0029768.1 MGP_CBAJ_G0018292.1 mouse_genomes_project 11 75758330 75761802 - MGP_CBAJ_P0029768 2810408A11Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0029769.1 MGP_CBAJ_G0018292.1 mouse_genomes_project 11 75759069 75760510 - 2810408A11Rik protein_coding retained_intron MGP_CBAJ_T0029770.1 MGP_CBAJ_G0018292.1 mouse_genomes_project 11 75760073 75761784 - MGP_CBAJ_P0029770 2810408A11Rik protein_coding protein_coding MGP_CBAJ_T0028408.1 MGP_CBAJ_G0017938.1 mouse_genomes_project 11 51844716 51961227 + MGP_CBAJ_P0028408 Olfr56 protein_coding protein_coding MGP_CBAJ_T0028409.1 MGP_CBAJ_G0017938.1 mouse_genomes_project 11 51844716 51961227 + MGP_CBAJ_P0028409 Olfr56 protein_coding protein_coding MGP_CBAJ_T0028410.1 MGP_CBAJ_G0017938.1 mouse_genomes_project 11 51844716 51961227 + MGP_CBAJ_P0028410 Olfr56 protein_coding protein_coding MGP_CBAJ_T0028416.1 MGP_CBAJ_G0017938.1 mouse_genomes_project 11 51906874 51950146 + Olfr56 protein_coding retained_intron MGP_CBAJ_T0028418.1 MGP_CBAJ_G0017938.1 mouse_genomes_project 11 51906892 51961160 + MGP_CBAJ_P0028418 Olfr56 protein_coding protein_coding MGP_CBAJ_T0028421.1 MGP_CBAJ_G0017938.1 mouse_genomes_project 11 51941737 51961159 + MGP_CBAJ_P0028421 Olfr56 protein_coding protein_coding MGP_CBAJ_T0003181.1 MGP_CBAJ_G0002946.1 mouse_genomes_project 11 95215786 95221275 - Gm11491 antisense antisense MGP_CBAJ_T0003182.1 MGP_CBAJ_G0002946.1 mouse_genomes_project 11 95216004 95221328 - Gm11491 antisense antisense MGP_CBAJ_T0012590.1 MGP_CBAJ_G0010702.1 mouse_genomes_project 11 116094236 116094825 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101561.1 MGP_CBAJ_G0039593.1 mouse_genomes_project 11 109883965 109884175 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0009604.1 MGP_CBAJ_G0007742.1 mouse_genomes_project 11 90571764 90571827 - Gm27598 miRNA miRNA MGP_CBAJ_T0032846.1 MGP_CBAJ_G0019053.1 mouse_genomes_project 11 121215314 121229090 + MGP_CBAJ_P0032846 Amz2 protein_coding protein_coding MGP_CBAJ_T0032847.1 MGP_CBAJ_G0019053.1 mouse_genomes_project 11 121215344 121248743 + MGP_CBAJ_P0032847 Amz2 protein_coding protein_coding MGP_CBAJ_T0032848.1 MGP_CBAJ_G0019053.1 mouse_genomes_project 11 121215350 121220416 + Amz2 protein_coding retained_intron MGP_CBAJ_T0032849.1 MGP_CBAJ_G0019053.1 mouse_genomes_project 11 121215592 121227918 + MGP_CBAJ_P0032849 Amz2 protein_coding protein_coding MGP_CBAJ_T0032850.1 MGP_CBAJ_G0019053.1 mouse_genomes_project 11 121222052 121225551 + Amz2 protein_coding processed_transcript MGP_CBAJ_T0032851.1 MGP_CBAJ_G0019053.1 mouse_genomes_project 11 121224705 121225656 + Amz2 protein_coding retained_intron MGP_CBAJ_T0032852.1 MGP_CBAJ_G0019053.1 mouse_genomes_project 11 121224918 121228193 + Amz2 protein_coding processed_transcript MGP_CBAJ_T0032853.1 MGP_CBAJ_G0019053.1 mouse_genomes_project 11 121233255 121249184 + Amz2 protein_coding processed_transcript MGP_CBAJ_T0099932.1 MGP_CBAJ_G0038187.1 mouse_genomes_project 11 74796518 74796653 + Snord118 snoRNA snoRNA MGP_CBAJ_T0032369.1 MGP_CBAJ_G0018952.1 mouse_genomes_project 11 113086882 113106011 - MGP_CBAJ_P0032369 Slc4a1 protein_coding protein_coding MGP_CBAJ_T0032370.1 MGP_CBAJ_G0018952.1 mouse_genomes_project 11 113099813 113101300 - Slc4a1 protein_coding processed_transcript MGP_CBAJ_T0032371.1 MGP_CBAJ_G0018952.1 mouse_genomes_project 11 113100893 113104435 - Slc4a1 protein_coding processed_transcript MGP_CBAJ_T0032372.1 MGP_CBAJ_G0018952.1 mouse_genomes_project 11 113100926 113105978 - Slc4a1 protein_coding processed_transcript MGP_CBAJ_T0032373.1 MGP_CBAJ_G0018952.1 mouse_genomes_project 11 113102117 113106934 - Slc4a1 protein_coding processed_transcript MGP_CBAJ_T0028741.1 MGP_CBAJ_G0018029.1 mouse_genomes_project 11 57332857 57337171 + MGP_CBAJ_P0028741 Il5 protein_coding protein_coding MGP_CBAJ_T0029248.1 MGP_CBAJ_G0018172.1 mouse_genomes_project 11 66378543 66381311 + Fam83g protein_coding processed_transcript MGP_CBAJ_T0029249.1 MGP_CBAJ_G0018172.1 mouse_genomes_project 11 66378871 66404365 + MGP_CBAJ_P0029249 Fam83g protein_coding protein_coding MGP_CBAJ_T0006163.1 MGP_CBAJ_G0005143.1 mouse_genomes_project 11 67585706 67590230 + Gm27194 lincRNA lincRNA MGP_CBAJ_T0030922.1 MGP_CBAJ_G0018573.1 mouse_genomes_project 11 91135585 91141474 + MGP_CBAJ_P0030922 1700020L24Rik protein_coding protein_coding MGP_CBAJ_T0030923.1 MGP_CBAJ_G0018573.1 mouse_genomes_project 11 91140527 91141069 + MGP_CBAJ_P0030923 1700020L24Rik protein_coding protein_coding MGP_CBAJ_T0012384.1 MGP_CBAJ_G0010496.1 mouse_genomes_project 11 26808210 26808734 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0030950.1 MGP_CBAJ_G0018586.1 mouse_genomes_project 11 91481933 91517655 + MGP_CBAJ_P0030950 Heatr6 protein_coding protein_coding MGP_CBAJ_T0030951.1 MGP_CBAJ_G0018586.1 mouse_genomes_project 11 91481951 91515921 + Heatr6 protein_coding processed_transcript MGP_CBAJ_T0030952.1 MGP_CBAJ_G0018586.1 mouse_genomes_project 11 91482266 91483841 + Heatr6 protein_coding processed_transcript MGP_CBAJ_T0030953.1 MGP_CBAJ_G0018586.1 mouse_genomes_project 11 91488711 91493305 + Heatr6 protein_coding retained_intron MGP_CBAJ_T0030954.1 MGP_CBAJ_G0018586.1 mouse_genomes_project 11 91505504 91512817 + Heatr6 protein_coding processed_transcript MGP_CBAJ_T0031145.1 MGP_CBAJ_G0018630.1 mouse_genomes_project 11 95749049 95751736 + MGP_CBAJ_P0031145 Gm11492 protein_coding protein_coding MGP_CBAJ_T0031837.1 MGP_CBAJ_G0018799.1 mouse_genomes_project 11 108856298 108868652 + MGP_CBAJ_P0031837 Msl1 protein_coding protein_coding MGP_CBAJ_T0031838.1 MGP_CBAJ_G0018799.1 mouse_genomes_project 11 108856573 108861835 + MGP_CBAJ_P0031838 Msl1 protein_coding protein_coding MGP_CBAJ_T0031839.1 MGP_CBAJ_G0018799.1 mouse_genomes_project 11 108856582 108867217 + MGP_CBAJ_P0031839 Msl1 protein_coding protein_coding MGP_CBAJ_T0031840.1 MGP_CBAJ_G0018799.1 mouse_genomes_project 11 108859436 108866390 + MGP_CBAJ_P0031840 Msl1 protein_coding protein_coding MGP_CBAJ_T0031841.1 MGP_CBAJ_G0018799.1 mouse_genomes_project 11 108860947 108864902 + MGP_CBAJ_P0031841 Msl1 protein_coding protein_coding MGP_CBAJ_T0031842.1 MGP_CBAJ_G0018799.1 mouse_genomes_project 11 108865053 108866562 + Msl1 protein_coding processed_transcript MGP_CBAJ_T0003118.1 MGP_CBAJ_G0002895.1 mouse_genomes_project 11 66167658 66168332 - B9d1os antisense antisense MGP_CBAJ_T0099902.1 MGP_CBAJ_G0038157.1 mouse_genomes_project 11 5834067 5834142 - Gm24051 snoRNA snoRNA MGP_CBAJ_T0012502.1 MGP_CBAJ_G0010614.1 mouse_genomes_project 11 76376508 76377046 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0029329.1 MGP_CBAJ_G0018186.1 mouse_genomes_project 11 67466336 67485353 + MGP_CBAJ_P0029329 Mmgt2 protein_coding protein_coding MGP_CBAJ_T0029330.1 MGP_CBAJ_G0018186.1 mouse_genomes_project 11 67466485 67480431 + Mmgt2 protein_coding retained_intron MGP_CBAJ_T0029331.1 MGP_CBAJ_G0018186.1 mouse_genomes_project 11 67466489 67485283 + Mmgt2 protein_coding processed_transcript MGP_CBAJ_T0029332.1 MGP_CBAJ_G0018186.1 mouse_genomes_project 11 67466492 67485215 + Mmgt2 protein_coding processed_transcript MGP_CBAJ_T0029333.1 MGP_CBAJ_G0018186.1 mouse_genomes_project 11 67466503 67485423 + MGP_CBAJ_P0029333 Mmgt2 protein_coding protein_coding MGP_CBAJ_T0029334.1 MGP_CBAJ_G0018186.1 mouse_genomes_project 11 67466507 67485730 + MGP_CBAJ_P0029334 Mmgt2 protein_coding protein_coding MGP_CBAJ_T0029335.1 MGP_CBAJ_G0018186.1 mouse_genomes_project 11 67467121 67486851 + MGP_CBAJ_P0029335 Mmgt2 protein_coding protein_coding MGP_CBAJ_T0012570.1 MGP_CBAJ_G0010682.1 mouse_genomes_project 11 107944625 107944781 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0031948.1 MGP_CBAJ_G0018861.1 mouse_genomes_project 11 110466819 110472492 - MGP_CBAJ_P0031948 Krt13 protein_coding protein_coding MGP_CBAJ_T0031949.1 MGP_CBAJ_G0018861.1 mouse_genomes_project 11 110467392 110468335 - Krt13 protein_coding retained_intron MGP_CBAJ_T0031950.1 MGP_CBAJ_G0018861.1 mouse_genomes_project 11 110468645 110469967 - Krt13 protein_coding processed_transcript MGP_CBAJ_T0029494.1 MGP_CBAJ_G0018230.1 mouse_genomes_project 11 74187462 74197827 + MGP_CBAJ_P0029494 Ccdc42 protein_coding protein_coding MGP_CBAJ_T0029495.1 MGP_CBAJ_G0018230.1 mouse_genomes_project 11 74187574 74197806 + MGP_CBAJ_P0029495 Ccdc42 protein_coding protein_coding MGP_CBAJ_T0029496.1 MGP_CBAJ_G0018230.1 mouse_genomes_project 11 74194484 74197815 + MGP_CBAJ_P0029496 Ccdc42 protein_coding protein_coding MGP_CBAJ_T0033006.1 MGP_CBAJ_G0019093.1 mouse_genomes_project 11 127591409 127608958 - MGP_CBAJ_P0033006 Cd300lf protein_coding protein_coding MGP_CBAJ_T0033007.1 MGP_CBAJ_G0019093.1 mouse_genomes_project 11 127591409 127608958 - MGP_CBAJ_P0033007 Cd300lf protein_coding protein_coding MGP_CBAJ_T0033008.1 MGP_CBAJ_G0019093.1 mouse_genomes_project 11 127591409 127608958 - MGP_CBAJ_P0033008 Cd300lf protein_coding protein_coding MGP_CBAJ_T0033009.1 MGP_CBAJ_G0019093.1 mouse_genomes_project 11 127592123 127608847 - MGP_CBAJ_P0033009 Cd300lf protein_coding unknown_likely_coding MGP_CBAJ_T0033010.1 MGP_CBAJ_G0019093.1 mouse_genomes_project 11 127593991 127608957 - Cd300lf protein_coding processed_transcript MGP_CBAJ_T0033011.1 MGP_CBAJ_G0019093.1 mouse_genomes_project 11 127595394 127601962 - Cd300lf protein_coding processed_transcript MGP_CBAJ_T0033012.1 MGP_CBAJ_G0019093.1 mouse_genomes_project 11 127595478 127601909 - Cd300lf protein_coding processed_transcript MGP_CBAJ_T0033013.1 MGP_CBAJ_G0019093.1 mouse_genomes_project 11 127595490 127601903 - Cd300lf protein_coding processed_transcript MGP_CBAJ_T0030748.1 MGP_CBAJ_G0018524.1 mouse_genomes_project 11 86719447 86728345 - MGP_CBAJ_P0030748 protein_coding protein_coding MGP_CBAJ_T0027720.1 MGP_CBAJ_G0017766.1 mouse_genomes_project 11 6923614 6948663 - MGP_CBAJ_P0027720 Hus1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027721.1 MGP_CBAJ_G0017766.1 mouse_genomes_project 11 6923614 6948694 - MGP_CBAJ_P0027721 Hus1 protein_coding protein_coding MGP_CBAJ_T0027722.1 MGP_CBAJ_G0017766.1 mouse_genomes_project 11 6925833 6948631 - Hus1 protein_coding retained_intron MGP_CBAJ_T0027723.1 MGP_CBAJ_G0017766.1 mouse_genomes_project 11 6927817 6948667 - Hus1 protein_coding retained_intron MGP_CBAJ_T0027724.1 MGP_CBAJ_G0017766.1 mouse_genomes_project 11 6931269 6948181 - Hus1 protein_coding retained_intron MGP_CBAJ_T0027725.1 MGP_CBAJ_G0017766.1 mouse_genomes_project 11 6943473 6948631 - Hus1 protein_coding processed_transcript MGP_CBAJ_T0031931.1 MGP_CBAJ_G0018846.1 mouse_genomes_project 11 110111814 110113079 - MGP_CBAJ_P0031931 2300003K06Rik protein_coding protein_coding MGP_CBAJ_T0030759.1 MGP_CBAJ_G0018527.1 mouse_genomes_project 11 87193869 87227446 - MGP_CBAJ_P0030759 Utp6 protein_coding protein_coding MGP_CBAJ_T0030760.1 MGP_CBAJ_G0018527.1 mouse_genomes_project 11 87195501 87227457 - MGP_CBAJ_P0030760 Utp6 protein_coding protein_coding MGP_CBAJ_T0030761.1 MGP_CBAJ_G0018527.1 mouse_genomes_project 11 87197398 87207314 - Utp6 protein_coding retained_intron MGP_CBAJ_T0030762.1 MGP_CBAJ_G0018527.1 mouse_genomes_project 11 87223663 87227434 - Utp6 protein_coding retained_intron MGP_CBAJ_T0029455.1 MGP_CBAJ_G0018219.1 mouse_genomes_project 11 73134890 73248993 - MGP_CBAJ_P0029455 Glp2r protein_coding protein_coding MGP_CBAJ_T0029458.1 MGP_CBAJ_G0018219.1 mouse_genomes_project 11 73189272 73265364 - MGP_CBAJ_P0029458 Glp2r protein_coding protein_coding MGP_CBAJ_T0028970.1 MGP_CBAJ_G0018108.1 mouse_genomes_project 11 63226841 63227692 + MGP_CBAJ_P0028970 protein_coding protein_coding MGP_CBAJ_T0033312.1 MGP_CBAJ_G0019148.1 mouse_genomes_project 11 129151256 129168202 - MGP_CBAJ_P0033312 Qrich2 protein_coding protein_coding MGP_CBAJ_T0033313.1 MGP_CBAJ_G0019148.1 mouse_genomes_project 11 129151258 129169092 - MGP_CBAJ_P0033313 Qrich2 protein_coding protein_coding MGP_CBAJ_T0033314.1 MGP_CBAJ_G0019148.1 mouse_genomes_project 11 129154433 129160832 - Qrich2 protein_coding retained_intron MGP_CBAJ_T0031934.1 MGP_CBAJ_G0018849.1 mouse_genomes_project 11 110219354 110220275 + MGP_CBAJ_P0031934 Gm11565 protein_coding protein_coding MGP_CBAJ_T0032053.1 MGP_CBAJ_G0018889.1 mouse_genomes_project 11 111199848 111201708 - MGP_CBAJ_P0032053 Hcrt protein_coding protein_coding MGP_CBAJ_T0032054.1 MGP_CBAJ_G0018889.1 mouse_genomes_project 11 111200470 111201711 - MGP_CBAJ_P0032054 Hcrt protein_coding protein_coding MGP_CBAJ_T0032492.1 MGP_CBAJ_G0018975.1 mouse_genomes_project 11 113996617 114008735 + MGP_CBAJ_P0032492 Acbd4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032493.1 MGP_CBAJ_G0018975.1 mouse_genomes_project 11 113996617 114008732 + MGP_CBAJ_P0032493 Acbd4 protein_coding protein_coding MGP_CBAJ_T0032494.1 MGP_CBAJ_G0018975.1 mouse_genomes_project 11 113996621 113998942 + Acbd4 protein_coding processed_transcript MGP_CBAJ_T0032495.1 MGP_CBAJ_G0018975.1 mouse_genomes_project 11 113996621 114000318 + MGP_CBAJ_P0032495 Acbd4 protein_coding protein_coding MGP_CBAJ_T0032496.1 MGP_CBAJ_G0018975.1 mouse_genomes_project 11 113996623 114008734 + MGP_CBAJ_P0032496 Acbd4 protein_coding protein_coding MGP_CBAJ_T0032497.1 MGP_CBAJ_G0018975.1 mouse_genomes_project 11 113996644 113998306 + Acbd4 protein_coding retained_intron MGP_CBAJ_T0032498.1 MGP_CBAJ_G0018975.1 mouse_genomes_project 11 113996647 113999100 + MGP_CBAJ_P0032498 Acbd4 protein_coding protein_coding MGP_CBAJ_T0032499.1 MGP_CBAJ_G0018975.1 mouse_genomes_project 11 113996661 113998144 + Acbd4 protein_coding retained_intron MGP_CBAJ_T0032500.1 MGP_CBAJ_G0018975.1 mouse_genomes_project 11 113997941 114000392 + MGP_CBAJ_P0032500 Acbd4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032501.1 MGP_CBAJ_G0018975.1 mouse_genomes_project 11 113997994 114000377 + Acbd4 protein_coding processed_transcript MGP_CBAJ_T0032502.1 MGP_CBAJ_G0018975.1 mouse_genomes_project 11 113997996 113999772 + MGP_CBAJ_P0032502 Acbd4 protein_coding protein_coding MGP_CBAJ_T0032503.1 MGP_CBAJ_G0018975.1 mouse_genomes_project 11 113998028 113999019 + Acbd4 protein_coding retained_intron MGP_CBAJ_T0032504.1 MGP_CBAJ_G0018975.1 mouse_genomes_project 11 113998172 113999408 + Acbd4 protein_coding retained_intron MGP_CBAJ_T0032505.1 MGP_CBAJ_G0018975.1 mouse_genomes_project 11 113999630 114008488 + Acbd4 protein_coding retained_intron MGP_CBAJ_T0032506.1 MGP_CBAJ_G0018975.1 mouse_genomes_project 11 114001108 114008274 + Acbd4 protein_coding processed_transcript MGP_CBAJ_T0032507.1 MGP_CBAJ_G0018975.1 mouse_genomes_project 11 114001129 114008732 + Acbd4 protein_coding processed_transcript MGP_CBAJ_T0030072.1 MGP_CBAJ_G0018348.1 mouse_genomes_project 11 77089758 77095324 + MGP_CBAJ_P0030072 Mis12 protein_coding protein_coding MGP_CBAJ_T0030073.1 MGP_CBAJ_G0018348.1 mouse_genomes_project 11 77089758 77097517 + MGP_CBAJ_P0030073 Mis12 protein_coding protein_coding MGP_CBAJ_T0030074.1 MGP_CBAJ_G0018348.1 mouse_genomes_project 11 77089758 77096212 + MGP_CBAJ_P0030074 Mis12 protein_coding protein_coding MGP_CBAJ_T0030075.1 MGP_CBAJ_G0018348.1 mouse_genomes_project 11 77090006 77095313 + MGP_CBAJ_P0030075 Mis12 protein_coding protein_coding MGP_CBAJ_T0030076.1 MGP_CBAJ_G0018348.1 mouse_genomes_project 11 77090009 77095304 + MGP_CBAJ_P0030076 Mis12 protein_coding protein_coding MGP_CBAJ_T0030077.1 MGP_CBAJ_G0018348.1 mouse_genomes_project 11 77090038 77095341 + MGP_CBAJ_P0030077 Mis12 protein_coding protein_coding MGP_CBAJ_T0032440.1 MGP_CBAJ_G0018963.1 mouse_genomes_project 11 113573743 113596070 + MGP_CBAJ_P0032440 Adam11 protein_coding protein_coding MGP_CBAJ_T0032441.1 MGP_CBAJ_G0018963.1 mouse_genomes_project 11 113573743 113596070 + MGP_CBAJ_P0032441 Adam11 protein_coding protein_coding MGP_CBAJ_T0032442.1 MGP_CBAJ_G0018963.1 mouse_genomes_project 11 113574390 113587261 + Adam11 protein_coding processed_transcript MGP_CBAJ_T0032443.1 MGP_CBAJ_G0018963.1 mouse_genomes_project 11 113574487 113587621 + Adam11 protein_coding processed_transcript MGP_CBAJ_T0032444.1 MGP_CBAJ_G0018963.1 mouse_genomes_project 11 113582079 113587554 + Adam11 protein_coding processed_transcript MGP_CBAJ_T0032445.1 MGP_CBAJ_G0018963.1 mouse_genomes_project 11 113587268 113589448 + Adam11 protein_coding processed_transcript MGP_CBAJ_T0032446.1 MGP_CBAJ_G0018963.1 mouse_genomes_project 11 113589867 113591916 + Adam11 protein_coding processed_transcript MGP_CBAJ_T0032447.1 MGP_CBAJ_G0018963.1 mouse_genomes_project 11 113589903 113592193 + Adam11 protein_coding processed_transcript MGP_CBAJ_T0032448.1 MGP_CBAJ_G0018963.1 mouse_genomes_project 11 113592345 113594259 + Adam11 protein_coding processed_transcript MGP_CBAJ_T0032007.1 MGP_CBAJ_G0018879.1 mouse_genomes_project 11 110949418 110980621 + Ttc25 protein_coding retained_intron MGP_CBAJ_T0032008.1 MGP_CBAJ_G0018879.1 mouse_genomes_project 11 110949434 110953931 + Ttc25 protein_coding retained_intron MGP_CBAJ_T0032009.1 MGP_CBAJ_G0018879.1 mouse_genomes_project 11 110949525 110982776 + MGP_CBAJ_P0032009 Ttc25 protein_coding protein_coding MGP_CBAJ_T0032010.1 MGP_CBAJ_G0018879.1 mouse_genomes_project 11 110953267 110954049 + Ttc25 protein_coding retained_intron MGP_CBAJ_T0099942.1 MGP_CBAJ_G0038197.1 mouse_genomes_project 11 84096502 84096590 - Gm24989 snoRNA snoRNA MGP_CBAJ_T0003285.1 MGP_CBAJ_G0003031.1 mouse_genomes_project 11 133462770 133464682 - Gm11770 antisense antisense MGP_CBAJ_T0006177.1 MGP_CBAJ_G0005154.1 mouse_genomes_project 11 77102086 77103659 - 6330403K07Rik lincRNA lincRNA MGP_CBAJ_T0028425.1 MGP_CBAJ_G0017946.1 mouse_genomes_project 11 51993099 52014636 - MGP_CBAJ_P0028425 Btnl9 protein_coding protein_coding MGP_CBAJ_T0028426.1 MGP_CBAJ_G0017946.1 mouse_genomes_project 11 51996546 52014522 - MGP_CBAJ_P0028426 Btnl9 protein_coding protein_coding MGP_CBAJ_T0028427.1 MGP_CBAJ_G0017946.1 mouse_genomes_project 11 51996814 51998168 - Btnl9 protein_coding retained_intron MGP_CBAJ_T0028428.1 MGP_CBAJ_G0017946.1 mouse_genomes_project 11 52002318 52014514 - MGP_CBAJ_P0028428 Btnl9 protein_coding protein_coding MGP_CBAJ_T0028429.1 MGP_CBAJ_G0017946.1 mouse_genomes_project 11 52009773 52014544 - Btnl9 protein_coding processed_transcript MGP_CBAJ_T0006260.1 MGP_CBAJ_G0005214.1 mouse_genomes_project 11 125008257 125009351 + 4933434M16Rik lincRNA lincRNA MGP_CBAJ_T0006261.1 MGP_CBAJ_G0005214.1 mouse_genomes_project 11 125008282 125015540 + 4933434M16Rik lincRNA lincRNA MGP_CBAJ_T0098716.1 MGP_CBAJ_G0036971.1 mouse_genomes_project 11 95605422 95605643 - Gm23137 snRNA snRNA MGP_CBAJ_T0033564.1 MGP_CBAJ_G0019199.1 mouse_genomes_project 11 132415104 132454110 + MGP_CBAJ_P0033564 Card14 protein_coding protein_coding MGP_CBAJ_T0033565.1 MGP_CBAJ_G0019199.1 mouse_genomes_project 11 132420070 132454110 + MGP_CBAJ_P0033565 Card14 protein_coding protein_coding MGP_CBAJ_T0033566.1 MGP_CBAJ_G0019199.1 mouse_genomes_project 11 132428259 132453922 + Card14 protein_coding processed_transcript MGP_CBAJ_T0033567.1 MGP_CBAJ_G0019199.1 mouse_genomes_project 11 132430553 132454109 + Card14 protein_coding processed_transcript MGP_CBAJ_T0030677.1 MGP_CBAJ_G0018503.1 mouse_genomes_project 11 85466744 85493659 - MGP_CBAJ_P0030677 Slc13a2 protein_coding protein_coding MGP_CBAJ_T0101547.1 MGP_CBAJ_G0039579.1 mouse_genomes_project 11 80493808 80499756 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0011179.1 MGP_CBAJ_G0009317.1 mouse_genomes_project 11 78489852 78490123 + Gm23224 misc_RNA misc_RNA MGP_CBAJ_T0030196.1 MGP_CBAJ_G0018381.1 mouse_genomes_project 11 79463189 79478656 - MGP_CBAJ_P0030196 Ctns protein_coding protein_coding MGP_CBAJ_T0030197.1 MGP_CBAJ_G0018381.1 mouse_genomes_project 11 79463190 79478656 - MGP_CBAJ_P0030197 Ctns protein_coding protein_coding MGP_CBAJ_T0030198.1 MGP_CBAJ_G0018381.1 mouse_genomes_project 11 79465945 79468400 - Ctns protein_coding retained_intron MGP_CBAJ_T0030199.1 MGP_CBAJ_G0018381.1 mouse_genomes_project 11 79470928 79478635 - Ctns protein_coding retained_intron MGP_CBAJ_T0030200.1 MGP_CBAJ_G0018381.1 mouse_genomes_project 11 79471330 79478609 - Ctns protein_coding processed_transcript MGP_CBAJ_T0032569.1 MGP_CBAJ_G0018993.1 mouse_genomes_project 11 115230060 115232282 + MGP_CBAJ_P0032569 Sppl2c protein_coding protein_coding MGP_CBAJ_T0032570.1 MGP_CBAJ_G0018993.1 mouse_genomes_project 11 115230060 115234828 + MGP_CBAJ_P0032570 Sppl2c protein_coding protein_coding MGP_CBAJ_T0006178.1 MGP_CBAJ_G0005155.1 mouse_genomes_project 11 77492632 77501535 - Gm16013 lincRNA lincRNA MGP_CBAJ_T0016937.1 MGP_CBAJ_G0014914.1 mouse_genomes_project 11 63899740 63907473 + 4933439C10Rik processed_transcript processed_transcript MGP_CBAJ_T0016938.1 MGP_CBAJ_G0014914.1 mouse_genomes_project 11 63899763 63905171 + 4933439C10Rik processed_transcript processed_transcript MGP_CBAJ_T0016939.1 MGP_CBAJ_G0014914.1 mouse_genomes_project 11 63900175 63900931 + 4933439C10Rik processed_transcript processed_transcript MGP_CBAJ_T0016940.1 MGP_CBAJ_G0014914.1 mouse_genomes_project 11 63900231 63904200 + 4933439C10Rik processed_transcript processed_transcript MGP_CBAJ_T0016941.1 MGP_CBAJ_G0014914.1 mouse_genomes_project 11 63900746 63904252 + 4933439C10Rik processed_transcript processed_transcript MGP_CBAJ_T0016942.1 MGP_CBAJ_G0014914.1 mouse_genomes_project 11 63901720 63905171 + 4933439C10Rik processed_transcript processed_transcript MGP_CBAJ_T0012621.1 MGP_CBAJ_G0010733.1 mouse_genomes_project 11 130883965 130884389 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009657.1 MGP_CBAJ_G0007795.1 mouse_genomes_project 11 133924357 133924411 - Mir6936 miRNA miRNA MGP_CBAJ_T0029372.1 MGP_CBAJ_G0018197.1 mouse_genomes_project 11 68969601 69088899 - MGP_CBAJ_P0029372 Cox10 protein_coding protein_coding MGP_CBAJ_T0029373.1 MGP_CBAJ_G0018197.1 mouse_genomes_project 11 69080804 69088901 - Cox10 protein_coding processed_transcript MGP_CBAJ_T0028522.1 MGP_CBAJ_G0017973.1 mouse_genomes_project 11 53286176 53325029 - MGP_CBAJ_P0028522 Canx protein_coding protein_coding MGP_CBAJ_T0028523.1 MGP_CBAJ_G0017973.1 mouse_genomes_project 11 53286682 53325029 - MGP_CBAJ_P0028523 Canx protein_coding protein_coding MGP_CBAJ_T0028524.1 MGP_CBAJ_G0017973.1 mouse_genomes_project 11 53288414 53291594 - Canx protein_coding processed_transcript MGP_CBAJ_T0028525.1 MGP_CBAJ_G0017973.1 mouse_genomes_project 11 53289579 53290535 - Canx protein_coding processed_transcript MGP_CBAJ_T0028526.1 MGP_CBAJ_G0017973.1 mouse_genomes_project 11 53291053 53293206 - Canx protein_coding processed_transcript MGP_CBAJ_T0098719.1 MGP_CBAJ_G0036974.1 mouse_genomes_project 11 97630605 97630709 - Gm22534 snRNA snRNA MGP_CBAJ_T0003111.1 MGP_CBAJ_G0002890.1 mouse_genomes_project 11 64202365 64207484 - Gm12264 antisense antisense MGP_CBAJ_T0098674.1 MGP_CBAJ_G0036929.1 mouse_genomes_project 11 23081320 23081427 - Gm22753 snRNA snRNA MGP_CBAJ_T0003092.1 MGP_CBAJ_G0002874.1 mouse_genomes_project 11 57336017 57336683 - Gm12214 antisense antisense MGP_CBAJ_T0029589.1 MGP_CBAJ_G0018248.1 mouse_genomes_project 11 74855732 74882386 + MGP_CBAJ_P0029589 Aloxe3 protein_coding protein_coding MGP_CBAJ_T0029590.1 MGP_CBAJ_G0018248.1 mouse_genomes_project 11 74856051 74865303 + Aloxe3 protein_coding retained_intron MGP_CBAJ_T0029591.1 MGP_CBAJ_G0018248.1 mouse_genomes_project 11 74856239 74864321 + MGP_CBAJ_P0029591 Aloxe3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029592.1 MGP_CBAJ_G0018248.1 mouse_genomes_project 11 74863938 74864903 + Aloxe3 protein_coding retained_intron MGP_CBAJ_T0029593.1 MGP_CBAJ_G0018248.1 mouse_genomes_project 11 74864113 74872685 + Aloxe3 protein_coding retained_intron MGP_CBAJ_T0029594.1 MGP_CBAJ_G0018248.1 mouse_genomes_project 11 74865341 74872763 + Aloxe3 protein_coding retained_intron MGP_CBAJ_T0012308.1 MGP_CBAJ_G0010420.1 mouse_genomes_project 11 758489 758861 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016972.1 MGP_CBAJ_G0014931.1 mouse_genomes_project 11 92672272 92674737 + 4930502E09Rik processed_transcript processed_transcript MGP_CBAJ_T0098270.1 MGP_CBAJ_G0036540.1 mouse_genomes_project 11 132246841 132247405 - Gm11753 sense_intronic sense_intronic MGP_CBAJ_T0003045.1 MGP_CBAJ_G0002833.1 mouse_genomes_project 11 3459921 3464064 + antisense antisense MGP_CBAJ_T0029667.1 MGP_CBAJ_G0018268.1 mouse_genomes_project 11 75441872 75464303 + MGP_CBAJ_P0029667 Fxr2 protein_coding protein_coding MGP_CBAJ_T0029668.1 MGP_CBAJ_G0018268.1 mouse_genomes_project 11 75448984 75450243 + Fxr2 protein_coding processed_transcript MGP_CBAJ_T0029669.1 MGP_CBAJ_G0018268.1 mouse_genomes_project 11 75454564 75460807 + Fxr2 protein_coding processed_transcript MGP_CBAJ_T0029670.1 MGP_CBAJ_G0018268.1 mouse_genomes_project 11 75460610 75462087 + Fxr2 protein_coding processed_transcript MGP_CBAJ_T0029671.1 MGP_CBAJ_G0018268.1 mouse_genomes_project 11 75462134 75462728 + Fxr2 protein_coding processed_transcript MGP_CBAJ_T0029672.1 MGP_CBAJ_G0018268.1 mouse_genomes_project 11 75463325 75463929 + Fxr2 protein_coding processed_transcript MGP_CBAJ_T0006102.1 MGP_CBAJ_G0005090.1 mouse_genomes_project 11 23716464 23717273 + Gm12063 lincRNA lincRNA MGP_CBAJ_T0012442.1 MGP_CBAJ_G0010554.1 mouse_genomes_project 11 53093359 53095665 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006234.1 MGP_CBAJ_G0005194.1 mouse_genomes_project 11 105310804 105311817 - Gm11527 lincRNA lincRNA MGP_CBAJ_T0028128.1 MGP_CBAJ_G0017857.1 mouse_genomes_project 11 32927209 32974307 - MGP_CBAJ_P0028128 Nprl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028133.1 MGP_CBAJ_G0017857.1 mouse_genomes_project 11 32932844 32960361 - Nprl3 protein_coding processed_transcript MGP_CBAJ_T0028134.1 MGP_CBAJ_G0017857.1 mouse_genomes_project 11 32932844 32974307 - MGP_CBAJ_P0028134 Nprl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028135.1 MGP_CBAJ_G0017857.1 mouse_genomes_project 11 32933544 32974325 - MGP_CBAJ_P0028135 Nprl3 protein_coding protein_coding MGP_CBAJ_T0028136.1 MGP_CBAJ_G0017857.1 mouse_genomes_project 11 32933635 32974276 - MGP_CBAJ_P0028136 Nprl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028137.1 MGP_CBAJ_G0017857.1 mouse_genomes_project 11 32934516 32935976 - Nprl3 protein_coding retained_intron MGP_CBAJ_T0028138.1 MGP_CBAJ_G0017857.1 mouse_genomes_project 11 32934524 32974247 - MGP_CBAJ_P0028138 Nprl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028139.1 MGP_CBAJ_G0017857.1 mouse_genomes_project 11 32934532 32974165 - MGP_CBAJ_P0028139 Nprl3 protein_coding protein_coding MGP_CBAJ_T0028140.1 MGP_CBAJ_G0017857.1 mouse_genomes_project 11 32938421 32941636 - Nprl3 protein_coding retained_intron MGP_CBAJ_T0028141.1 MGP_CBAJ_G0017857.1 mouse_genomes_project 11 32938467 32939611 - Nprl3 protein_coding retained_intron MGP_CBAJ_T0028142.1 MGP_CBAJ_G0017857.1 mouse_genomes_project 11 32941494 32958007 - Nprl3 protein_coding retained_intron MGP_CBAJ_T0028143.1 MGP_CBAJ_G0017857.1 mouse_genomes_project 11 32941557 32974276 - MGP_CBAJ_P0028143 Nprl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028144.1 MGP_CBAJ_G0017857.1 mouse_genomes_project 11 32945616 32954126 - Nprl3 protein_coding processed_transcript MGP_CBAJ_T0028145.1 MGP_CBAJ_G0017857.1 mouse_genomes_project 11 32951726 32954226 - Nprl3 protein_coding processed_transcript MGP_CBAJ_T0028146.1 MGP_CBAJ_G0017857.1 mouse_genomes_project 11 32954110 32974233 - MGP_CBAJ_P0028146 Nprl3 protein_coding protein_coding MGP_CBAJ_T0028147.1 MGP_CBAJ_G0017857.1 mouse_genomes_project 11 32966358 32974169 - Nprl3 protein_coding processed_transcript MGP_CBAJ_T0027496.1 MGP_CBAJ_G0017715.1 mouse_genomes_project 11 2019216 2021600 - MGP_CBAJ_P0027496 Uqcr10 protein_coding protein_coding MGP_CBAJ_T0027497.1 MGP_CBAJ_G0017715.1 mouse_genomes_project 11 2019218 2021592 - Uqcr10 protein_coding processed_transcript MGP_CBAJ_T0027498.1 MGP_CBAJ_G0017715.1 mouse_genomes_project 11 2019225 2021311 - Uqcr10 protein_coding processed_transcript MGP_CBAJ_T0028072.1 MGP_CBAJ_G0017843.1 mouse_genomes_project 11 30935447 31108641 - MGP_CBAJ_P0028072 Acyp2 protein_coding protein_coding MGP_CBAJ_T0028175.1 MGP_CBAJ_G0017871.1 mouse_genomes_project 11 34079998 34443869 - MGP_CBAJ_P0028175 Ranbp17 protein_coding protein_coding MGP_CBAJ_T0028176.1 MGP_CBAJ_G0017871.1 mouse_genomes_project 11 34080626 34225817 - MGP_CBAJ_P0028176 Ranbp17 protein_coding unknown_likely_coding MGP_CBAJ_T0028179.1 MGP_CBAJ_G0017871.1 mouse_genomes_project 11 34178939 34443765 - MGP_CBAJ_P0028179 Ranbp17 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028180.1 MGP_CBAJ_G0017871.1 mouse_genomes_project 11 34185310 34213419 - Ranbp17 protein_coding processed_transcript MGP_CBAJ_T0028181.1 MGP_CBAJ_G0017871.1 mouse_genomes_project 11 34386272 34443753 - MGP_CBAJ_P0028181 Ranbp17 protein_coding protein_coding MGP_CBAJ_T0028182.1 MGP_CBAJ_G0017871.1 mouse_genomes_project 11 34400065 34443217 - MGP_CBAJ_P0028182 Ranbp17 protein_coding protein_coding MGP_CBAJ_T0033096.1 MGP_CBAJ_G0019112.1 mouse_genomes_project 11 128029148 128050197 - MGP_CBAJ_P0033096 Hn1 protein_coding protein_coding MGP_CBAJ_T0033097.1 MGP_CBAJ_G0019112.1 mouse_genomes_project 11 128029754 128049958 - Hn1 protein_coding processed_transcript MGP_CBAJ_T0033098.1 MGP_CBAJ_G0019112.1 mouse_genomes_project 11 128029853 128050158 - Hn1 protein_coding processed_transcript MGP_CBAJ_T0033099.1 MGP_CBAJ_G0019112.1 mouse_genomes_project 11 128032098 128050181 - Hn1 protein_coding processed_transcript MGP_CBAJ_T0033100.1 MGP_CBAJ_G0019112.1 mouse_genomes_project 11 128034896 128049926 - Hn1 protein_coding processed_transcript MGP_CBAJ_T0028964.1 MGP_CBAJ_G0018105.1 mouse_genomes_project 11 63213611 63222299 + MGP_CBAJ_P0028964 protein_coding protein_coding MGP_CBAJ_T0028965.1 MGP_CBAJ_G0018105.1 mouse_genomes_project 11 63213658 63222800 + MGP_CBAJ_P0028965 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028966.1 MGP_CBAJ_G0018105.1 mouse_genomes_project 11 63213763 63222607 + MGP_CBAJ_P0028966 protein_coding protein_coding MGP_CBAJ_T0028967.1 MGP_CBAJ_G0018105.1 mouse_genomes_project 11 63213763 63222607 + MGP_CBAJ_P0028967 protein_coding protein_coding MGP_CBAJ_T0028295.1 MGP_CBAJ_G0017903.1 mouse_genomes_project 11 45688102 45693590 - MGP_CBAJ_P0028295 Fabp6 protein_coding protein_coding MGP_CBAJ_T0031899.1 MGP_CBAJ_G0018816.1 mouse_genomes_project 11 109548627 109558533 - MGP_CBAJ_P0031899 Krt28 protein_coding protein_coding MGP_CBAJ_T0006232.1 MGP_CBAJ_G0005192.1 mouse_genomes_project 11 105083901 105086466 + Gm26830 lincRNA lincRNA MGP_CBAJ_T0033219.1 MGP_CBAJ_G0019131.1 mouse_genomes_project 11 128669383 128676862 - MGP_CBAJ_P0033219 H3f3b protein_coding protein_coding MGP_CBAJ_T0033220.1 MGP_CBAJ_G0019131.1 mouse_genomes_project 11 128670816 128671987 - H3f3b protein_coding processed_transcript MGP_CBAJ_T0033221.1 MGP_CBAJ_G0019131.1 mouse_genomes_project 11 128670977 128671946 - H3f3b protein_coding processed_transcript MGP_CBAJ_T0032314.1 MGP_CBAJ_G0018945.1 mouse_genomes_project 11 112890158 112894583 + MGP_CBAJ_P0032314 G6pc3 protein_coding protein_coding MGP_CBAJ_T0032315.1 MGP_CBAJ_G0018945.1 mouse_genomes_project 11 112890207 112894583 + MGP_CBAJ_P0032315 G6pc3 protein_coding protein_coding MGP_CBAJ_T0032316.1 MGP_CBAJ_G0018945.1 mouse_genomes_project 11 112890293 112892643 + G6pc3 protein_coding processed_transcript MGP_CBAJ_T0032317.1 MGP_CBAJ_G0018945.1 mouse_genomes_project 11 112890321 112893702 + G6pc3 protein_coding processed_transcript MGP_CBAJ_T0032318.1 MGP_CBAJ_G0018945.1 mouse_genomes_project 11 112892310 112894154 + G6pc3 protein_coding processed_transcript MGP_CBAJ_T0032319.1 MGP_CBAJ_G0018945.1 mouse_genomes_project 11 112892520 112894100 + G6pc3 protein_coding processed_transcript MGP_CBAJ_T0032320.1 MGP_CBAJ_G0018945.1 mouse_genomes_project 11 112892526 112894253 + G6pc3 protein_coding processed_transcript MGP_CBAJ_T0028592.1 MGP_CBAJ_G0017992.1 mouse_genomes_project 11 54462259 54474148 + MGP_CBAJ_P0028592 Clk4 protein_coding protein_coding MGP_CBAJ_T0028593.1 MGP_CBAJ_G0017992.1 mouse_genomes_project 11 54462259 54472541 + MGP_CBAJ_P0028593 Clk4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028594.1 MGP_CBAJ_G0017992.1 mouse_genomes_project 11 54463643 54488309 + MGP_CBAJ_P0028594 Clk4 protein_coding protein_coding MGP_CBAJ_T0028595.1 MGP_CBAJ_G0017992.1 mouse_genomes_project 11 54463679 54475781 + MGP_CBAJ_P0028595 Clk4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028596.1 MGP_CBAJ_G0017992.1 mouse_genomes_project 11 54463691 54468034 + Clk4 protein_coding retained_intron MGP_CBAJ_T0028597.1 MGP_CBAJ_G0017992.1 mouse_genomes_project 11 54463693 54472886 + Clk4 protein_coding retained_intron MGP_CBAJ_T0028598.1 MGP_CBAJ_G0017992.1 mouse_genomes_project 11 54463698 54474144 + MGP_CBAJ_P0028598 Clk4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028599.1 MGP_CBAJ_G0017992.1 mouse_genomes_project 11 54463703 54472582 + Clk4 protein_coding retained_intron MGP_CBAJ_T0028600.1 MGP_CBAJ_G0017992.1 mouse_genomes_project 11 54463715 54488311 + MGP_CBAJ_P0028600 Clk4 protein_coding protein_coding MGP_CBAJ_T0028601.1 MGP_CBAJ_G0017992.1 mouse_genomes_project 11 54472520 54477731 + Clk4 protein_coding retained_intron MGP_CBAJ_T0028602.1 MGP_CBAJ_G0017992.1 mouse_genomes_project 11 54473972 54488309 + MGP_CBAJ_P0028602 Clk4 protein_coding protein_coding MGP_CBAJ_T0028603.1 MGP_CBAJ_G0017992.1 mouse_genomes_project 11 54474133 54476759 + Clk4 protein_coding retained_intron MGP_CBAJ_T0028604.1 MGP_CBAJ_G0017992.1 mouse_genomes_project 11 54475429 54476034 + Clk4 protein_coding retained_intron MGP_CBAJ_T0028605.1 MGP_CBAJ_G0017992.1 mouse_genomes_project 11 54486653 54487745 + Clk4 protein_coding retained_intron MGP_CBAJ_T0028518.1 MGP_CBAJ_G0017971.1 mouse_genomes_project 11 53225407 53227410 - MGP_CBAJ_P0028518 protein_coding protein_coding MGP_CBAJ_T0028519.1 MGP_CBAJ_G0017971.1 mouse_genomes_project 11 53225410 53227471 - MGP_CBAJ_P0028519 protein_coding protein_coding MGP_CBAJ_T0028520.1 MGP_CBAJ_G0017971.1 mouse_genomes_project 11 53225410 53227555 - MGP_CBAJ_P0028520 protein_coding protein_coding MGP_CBAJ_T0027616.1 MGP_CBAJ_G0017740.1 mouse_genomes_project 11 3436669 3438815 - MGP_CBAJ_P0027616 Myl7 protein_coding protein_coding MGP_CBAJ_T0033442.1 MGP_CBAJ_G0019171.1 mouse_genomes_project 11 130760042 130769717 + MGP_CBAJ_P0033442 6030468B19Rik protein_coding protein_coding MGP_CBAJ_T0006240.1 MGP_CBAJ_G0005197.1 mouse_genomes_project 11 106310906 106352788 - 2010300F17Rik lincRNA lincRNA MGP_CBAJ_T0006241.1 MGP_CBAJ_G0005197.1 mouse_genomes_project 11 106351378 106352762 - 2010300F17Rik lincRNA lincRNA MGP_CBAJ_T0003271.1 MGP_CBAJ_G0003018.1 mouse_genomes_project 11 128555968 128557096 + Recql5os1 antisense antisense MGP_CBAJ_T0030259.1 MGP_CBAJ_G0018413.1 mouse_genomes_project 11 80716520 80721599 + MGP_CBAJ_P0030259 Olfr59 protein_coding protein_coding MGP_CBAJ_T0030260.1 MGP_CBAJ_G0018413.1 mouse_genomes_project 11 80716578 80721435 + MGP_CBAJ_P0030260 Olfr59 protein_coding protein_coding MGP_CBAJ_T0030261.1 MGP_CBAJ_G0018413.1 mouse_genomes_project 11 80716593 80721885 + MGP_CBAJ_P0030261 Olfr59 protein_coding protein_coding MGP_CBAJ_T0030262.1 MGP_CBAJ_G0018413.1 mouse_genomes_project 11 80716617 80721434 + MGP_CBAJ_P0030262 Olfr59 protein_coding protein_coding MGP_CBAJ_T0003088.1 MGP_CBAJ_G0002870.1 mouse_genomes_project 11 55612565 55615450 + Gm12207 antisense antisense MGP_CBAJ_T0012501.1 MGP_CBAJ_G0010613.1 mouse_genomes_project 11 76308617 76309261 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012330.1 MGP_CBAJ_G0010442.1 mouse_genomes_project 11 4597847 4598613 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012328.1 MGP_CBAJ_G0010440.1 mouse_genomes_project 11 4500339 4501082 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0032025.1 MGP_CBAJ_G0018882.1 mouse_genomes_project 11 111037603 111049531 + MGP_CBAJ_P0032025 Nkiras2 protein_coding protein_coding MGP_CBAJ_T0032026.1 MGP_CBAJ_G0018882.1 mouse_genomes_project 11 111038642 111049148 + MGP_CBAJ_P0032026 Nkiras2 protein_coding protein_coding MGP_CBAJ_T0032027.1 MGP_CBAJ_G0018882.1 mouse_genomes_project 11 111041232 111050339 + MGP_CBAJ_P0032027 Nkiras2 protein_coding protein_coding MGP_CBAJ_T0032028.1 MGP_CBAJ_G0018882.1 mouse_genomes_project 11 111041276 111047610 + Nkiras2 protein_coding processed_transcript MGP_CBAJ_T0032029.1 MGP_CBAJ_G0018882.1 mouse_genomes_project 11 111041304 111049318 + Nkiras2 protein_coding processed_transcript MGP_CBAJ_T0032030.1 MGP_CBAJ_G0018882.1 mouse_genomes_project 11 111041367 111048849 + MGP_CBAJ_P0032030 Nkiras2 protein_coding protein_coding MGP_CBAJ_T0031797.1 MGP_CBAJ_G0018790.1 mouse_genomes_project 11 108549068 108558696 - MGP_CBAJ_P0031797 Ormdl3 protein_coding protein_coding MGP_CBAJ_T0098673.1 MGP_CBAJ_G0036928.1 mouse_genomes_project 11 22381545 22381649 + Gm24917 snRNA snRNA MGP_CBAJ_T0006100.1 MGP_CBAJ_G0005088.1 mouse_genomes_project 11 22215357 22219374 + Gm12056 lincRNA lincRNA MGP_CBAJ_T0009611.1 MGP_CBAJ_G0007749.1 mouse_genomes_project 11 96740526 96740618 + Mir378b miRNA miRNA MGP_CBAJ_T0029714.1 MGP_CBAJ_G0018276.1 mouse_genomes_project 11 75502673 75513506 - MGP_CBAJ_P0029714 Tnfsf12 protein_coding protein_coding MGP_CBAJ_T0029715.1 MGP_CBAJ_G0018276.1 mouse_genomes_project 11 75503763 75513178 - MGP_CBAJ_P0029715 Tnfsf12 protein_coding protein_coding MGP_CBAJ_T0012543.1 MGP_CBAJ_G0010655.1 mouse_genomes_project 11 93000523 93000932 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0032895.1 MGP_CBAJ_G0019064.1 mouse_genomes_project 11 122157507 122234801 - MGP_CBAJ_P0032895 Abca5 protein_coding protein_coding MGP_CBAJ_T0032896.1 MGP_CBAJ_G0019064.1 mouse_genomes_project 11 122174898 122234745 - MGP_CBAJ_P0032896 Abca5 protein_coding protein_coding MGP_CBAJ_T0032897.1 MGP_CBAJ_G0019064.1 mouse_genomes_project 11 122203907 122234768 - Abca5 protein_coding retained_intron MGP_CBAJ_T0032898.1 MGP_CBAJ_G0019064.1 mouse_genomes_project 11 122215584 122234763 - MGP_CBAJ_P0032898 Abca5 protein_coding protein_coding MGP_CBAJ_T0032899.1 MGP_CBAJ_G0019064.1 mouse_genomes_project 11 122222726 122234839 - Abca5 protein_coding processed_transcript MGP_CBAJ_T0033385.1 MGP_CBAJ_G0019162.1 mouse_genomes_project 11 129599555 129602695 - MGP_CBAJ_P0033385 Srsf2 protein_coding protein_coding MGP_CBAJ_T0033386.1 MGP_CBAJ_G0019162.1 mouse_genomes_project 11 129599558 129601820 - Srsf2 protein_coding retained_intron MGP_CBAJ_T0033387.1 MGP_CBAJ_G0019162.1 mouse_genomes_project 11 129599560 129601687 - MGP_CBAJ_P0033387 Srsf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033388.1 MGP_CBAJ_G0019162.1 mouse_genomes_project 11 129599693 129602673 - MGP_CBAJ_P0033388 Srsf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033389.1 MGP_CBAJ_G0019162.1 mouse_genomes_project 11 129599713 129601172 - Srsf2 protein_coding processed_transcript MGP_CBAJ_T0016903.1 MGP_CBAJ_G0014893.1 mouse_genomes_project 11 15749681 15769005 - Eldr processed_transcript processed_transcript MGP_CBAJ_T0016904.1 MGP_CBAJ_G0014893.1 mouse_genomes_project 11 15749686 15769024 - Eldr processed_transcript processed_transcript MGP_CBAJ_T0016905.1 MGP_CBAJ_G0014893.1 mouse_genomes_project 11 15749849 15768957 - Eldr processed_transcript processed_transcript MGP_CBAJ_T0016906.1 MGP_CBAJ_G0014893.1 mouse_genomes_project 11 15750113 15769006 - Eldr processed_transcript processed_transcript MGP_CBAJ_T0016907.1 MGP_CBAJ_G0014893.1 mouse_genomes_project 11 15750156 15769188 - Eldr processed_transcript processed_transcript MGP_CBAJ_T0016908.1 MGP_CBAJ_G0014893.1 mouse_genomes_project 11 15750229 15768997 - Eldr processed_transcript processed_transcript MGP_CBAJ_T0016909.1 MGP_CBAJ_G0014893.1 mouse_genomes_project 11 15753714 15769002 - Eldr processed_transcript processed_transcript MGP_CBAJ_T0027836.1 MGP_CBAJ_G0017793.1 mouse_genomes_project 11 19320255 19341409 + Rab1a protein_coding processed_transcript MGP_CBAJ_T0027837.1 MGP_CBAJ_G0017793.1 mouse_genomes_project 11 19320425 19349947 + Rab1a protein_coding processed_transcript MGP_CBAJ_T0027838.1 MGP_CBAJ_G0017793.1 mouse_genomes_project 11 19320446 19353175 + MGP_CBAJ_P0027838 Rab1a protein_coding protein_coding MGP_CBAJ_T0101548.1 MGP_CBAJ_G0039580.1 mouse_genomes_project 11 80713530 80714545 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0028847.1 MGP_CBAJ_G0018053.1 mouse_genomes_project 11 59018189 59051705 - MGP_CBAJ_P0028847 Slc36a2 protein_coding protein_coding MGP_CBAJ_T0028848.1 MGP_CBAJ_G0018053.1 mouse_genomes_project 11 59027733 59051705 - Slc36a2 protein_coding processed_transcript MGP_CBAJ_T0009656.1 MGP_CBAJ_G0007794.1 mouse_genomes_project 11 133608840 133608894 - Mir6935 miRNA miRNA MGP_CBAJ_T0029130.1 MGP_CBAJ_G0018150.1 mouse_genomes_project 11 65287101 65291663 + MGP_CBAJ_P0029130 Mief2 protein_coding protein_coding MGP_CBAJ_T0029131.1 MGP_CBAJ_G0018150.1 mouse_genomes_project 11 65287146 65289712 + Mief2 protein_coding retained_intron MGP_CBAJ_T0029132.1 MGP_CBAJ_G0018150.1 mouse_genomes_project 11 65287148 65289366 + Mief2 protein_coding processed_transcript MGP_CBAJ_T0032051.1 MGP_CBAJ_G0018888.1 mouse_genomes_project 11 111179126 111198508 - MGP_CBAJ_P0032051 Kcnh4 protein_coding protein_coding MGP_CBAJ_T0032052.1 MGP_CBAJ_G0018888.1 mouse_genomes_project 11 111179132 111198710 - MGP_CBAJ_P0032052 Kcnh4 protein_coding protein_coding MGP_CBAJ_T0033750.1 MGP_CBAJ_G0019236.1 mouse_genomes_project 11 133917983 133924504 - Sirt7 protein_coding retained_intron MGP_CBAJ_T0033751.1 MGP_CBAJ_G0019236.1 mouse_genomes_project 11 133917983 133924775 - Sirt7 protein_coding retained_intron MGP_CBAJ_T0033752.1 MGP_CBAJ_G0019236.1 mouse_genomes_project 11 133917983 133924549 - MGP_CBAJ_P0033752 Sirt7 protein_coding protein_coding MGP_CBAJ_T0033753.1 MGP_CBAJ_G0019236.1 mouse_genomes_project 11 133917985 133924534 - Sirt7 protein_coding retained_intron MGP_CBAJ_T0033754.1 MGP_CBAJ_G0019236.1 mouse_genomes_project 11 133917999 133924555 - Sirt7 protein_coding retained_intron MGP_CBAJ_T0033755.1 MGP_CBAJ_G0019236.1 mouse_genomes_project 11 133918031 133920590 - MGP_CBAJ_P0033755 Sirt7 protein_coding protein_coding MGP_CBAJ_T0033756.1 MGP_CBAJ_G0019236.1 mouse_genomes_project 11 133918380 133918981 - Sirt7 protein_coding processed_transcript MGP_CBAJ_T0033757.1 MGP_CBAJ_G0019236.1 mouse_genomes_project 11 133920611 133924525 - Sirt7 protein_coding processed_transcript MGP_CBAJ_T0033758.1 MGP_CBAJ_G0019236.1 mouse_genomes_project 11 133921524 133922337 - Sirt7 protein_coding retained_intron MGP_CBAJ_T0033759.1 MGP_CBAJ_G0019236.1 mouse_genomes_project 11 133922814 133924527 - Sirt7 protein_coding retained_intron MGP_CBAJ_T0033760.1 MGP_CBAJ_G0019236.1 mouse_genomes_project 11 133923524 133924519 - MGP_CBAJ_P0033760 Sirt7 protein_coding protein_coding MGP_CBAJ_T0032650.1 MGP_CBAJ_G0019008.1 mouse_genomes_project 11 117276999 117301247 + MGP_CBAJ_P0032650 Ace protein_coding protein_coding MGP_CBAJ_T0032651.1 MGP_CBAJ_G0019008.1 mouse_genomes_project 11 117280373 117300543 + MGP_CBAJ_P0032651 Ace protein_coding protein_coding MGP_CBAJ_T0032652.1 MGP_CBAJ_G0019008.1 mouse_genomes_project 11 117284255 117300536 + MGP_CBAJ_P0032652 Ace protein_coding protein_coding MGP_CBAJ_T0032653.1 MGP_CBAJ_G0019008.1 mouse_genomes_project 11 117285650 117293814 + Ace protein_coding processed_transcript MGP_CBAJ_T0028939.1 MGP_CBAJ_G0018089.1 mouse_genomes_project 11 62862242 62865545 + MGP_CBAJ_P0028939 Olfr325 protein_coding protein_coding MGP_CBAJ_T0028940.1 MGP_CBAJ_G0018089.1 mouse_genomes_project 11 62865120 62866185 + MGP_CBAJ_P0028940 Olfr325 protein_coding protein_coding MGP_CBAJ_T0033218.1 MGP_CBAJ_G0019130.1 mouse_genomes_project 11 128649231 128653550 - MGP_CBAJ_P0033218 Galk1 protein_coding protein_coding MGP_CBAJ_T0006094.1 MGP_CBAJ_G0005082.1 mouse_genomes_project 11 20068308 20068747 - Gm12037 lincRNA lincRNA MGP_CBAJ_T0030224.1 MGP_CBAJ_G0018390.1 mouse_genomes_project 11 79739767 79743208 - MGP_CBAJ_P0030224 Olfr378 protein_coding protein_coding MGP_CBAJ_T0003226.1 MGP_CBAJ_G0002979.1 mouse_genomes_project 11 111874747 111895465 - antisense antisense MGP_CBAJ_T0097759.1 MGP_CBAJ_G0036032.1 mouse_genomes_project 11 133927215 133927708 - pseudogene pseudogene MGP_CBAJ_T0029254.1 MGP_CBAJ_G0018174.1 mouse_genomes_project 11 66482740 66579554 - MGP_CBAJ_P0029254 Ulk2 protein_coding protein_coding MGP_CBAJ_T0029255.1 MGP_CBAJ_G0018174.1 mouse_genomes_project 11 66484593 66578983 - Ulk2 protein_coding processed_transcript MGP_CBAJ_T0029256.1 MGP_CBAJ_G0018174.1 mouse_genomes_project 11 66512395 66516515 - Ulk2 protein_coding processed_transcript MGP_CBAJ_T0012409.1 MGP_CBAJ_G0010521.1 mouse_genomes_project 11 33677406 33677985 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0029457.1 MGP_CBAJ_G0018220.1 mouse_genomes_project 11 73178208 73186174 + MGP_CBAJ_P0029457 Rcvrn protein_coding protein_coding MGP_CBAJ_T0032654.1 MGP_CBAJ_G0019009.1 mouse_genomes_project 11 117308160 117318942 + MGP_CBAJ_P0032654 Ace3 protein_coding protein_coding MGP_CBAJ_T0031726.1 MGP_CBAJ_G0018773.1 mouse_genomes_project 11 107876908 107898044 - MGP_CBAJ_P0031726 Cacnb1 protein_coding protein_coding MGP_CBAJ_T0031727.1 MGP_CBAJ_G0018773.1 mouse_genomes_project 11 107876918 107898032 - MGP_CBAJ_P0031727 Cacnb1 protein_coding protein_coding MGP_CBAJ_T0031728.1 MGP_CBAJ_G0018773.1 mouse_genomes_project 11 107880151 107893777 - MGP_CBAJ_P0031728 Cacnb1 protein_coding protein_coding MGP_CBAJ_T0031729.1 MGP_CBAJ_G0018773.1 mouse_genomes_project 11 107880329 107898044 - MGP_CBAJ_P0031729 Cacnb1 protein_coding protein_coding MGP_CBAJ_T0031730.1 MGP_CBAJ_G0018773.1 mouse_genomes_project 11 107880329 107898044 - MGP_CBAJ_P0031730 Cacnb1 protein_coding protein_coding MGP_CBAJ_T0031731.1 MGP_CBAJ_G0018773.1 mouse_genomes_project 11 107885029 107898439 - Cacnb1 protein_coding processed_transcript MGP_CBAJ_T0031732.1 MGP_CBAJ_G0018773.1 mouse_genomes_project 11 107885064 107887956 - Cacnb1 protein_coding processed_transcript MGP_CBAJ_T0098705.1 MGP_CBAJ_G0036960.1 mouse_genomes_project 11 86849188 86849291 - Gm25867 snRNA snRNA MGP_CBAJ_T0031382.1 MGP_CBAJ_G0018683.1 mouse_genomes_project 11 103720831 103727044 - Spata20 protein_coding processed_transcript MGP_CBAJ_T0031383.1 MGP_CBAJ_G0018683.1 mouse_genomes_project 11 103720831 103727291 - MGP_CBAJ_P0031383 Spata20 protein_coding protein_coding MGP_CBAJ_T0031384.1 MGP_CBAJ_G0018683.1 mouse_genomes_project 11 103724994 103726355 - Spata20 protein_coding processed_transcript MGP_CBAJ_T0031385.1 MGP_CBAJ_G0018683.1 mouse_genomes_project 11 103725295 103727042 - Spata20 protein_coding processed_transcript MGP_CBAJ_T0031386.1 MGP_CBAJ_G0018683.1 mouse_genomes_project 11 103726550 103728116 - Spata20 protein_coding processed_transcript MGP_CBAJ_T0009620.1 MGP_CBAJ_G0007758.1 mouse_genomes_project 11 107484003 107484074 + Mir6927 miRNA miRNA MGP_CBAJ_T0003277.1 MGP_CBAJ_G0003023.1 mouse_genomes_project 11 130101602 130107393 - Gm16045 antisense antisense MGP_CBAJ_T0032478.1 MGP_CBAJ_G0018971.1 mouse_genomes_project 11 113794260 113801698 - MGP_CBAJ_P0032478 C1ql1 protein_coding protein_coding MGP_CBAJ_T0009540.1 MGP_CBAJ_G0007678.1 mouse_genomes_project 11 24380666 24380810 - Gm25507 miRNA miRNA MGP_CBAJ_T0028666.1 MGP_CBAJ_G0018007.1 mouse_genomes_project 11 55429335 55458239 + MGP_CBAJ_P0028666 Ppp2ca protein_coding protein_coding MGP_CBAJ_T0028667.1 MGP_CBAJ_G0018007.1 mouse_genomes_project 11 55449287 55450237 + Ppp2ca protein_coding retained_intron MGP_CBAJ_T0099934.1 MGP_CBAJ_G0038189.1 mouse_genomes_project 11 75484373 75484517 - Gm25835 snoRNA snoRNA MGP_CBAJ_T0030054.1 MGP_CBAJ_G0018345.1 mouse_genomes_project 11 77041960 77049016 - MGP_CBAJ_P0030054 C1qbp protein_coding protein_coding MGP_CBAJ_T0030055.1 MGP_CBAJ_G0018345.1 mouse_genomes_project 11 77041972 77042997 - C1qbp protein_coding retained_intron MGP_CBAJ_T0030056.1 MGP_CBAJ_G0018345.1 mouse_genomes_project 11 77045157 77048997 - C1qbp protein_coding retained_intron MGP_CBAJ_T0098266.1 MGP_CBAJ_G0036537.1 mouse_genomes_project 11 119025639 119026826 + Gm11722 sense_intronic sense_intronic MGP_CBAJ_T0098711.1 MGP_CBAJ_G0036966.1 mouse_genomes_project 11 93448672 93448816 + Gm23765 snRNA snRNA MGP_CBAJ_T0029600.1 MGP_CBAJ_G0018251.1 mouse_genomes_project 11 74957193 74975793 - MGP_CBAJ_P0029600 Gucy2e protein_coding protein_coding MGP_CBAJ_T0029601.1 MGP_CBAJ_G0018251.1 mouse_genomes_project 11 74957196 74975793 - MGP_CBAJ_P0029601 Gucy2e protein_coding protein_coding MGP_CBAJ_T0029602.1 MGP_CBAJ_G0018251.1 mouse_genomes_project 11 74960234 74975807 - MGP_CBAJ_P0029602 Gucy2e protein_coding protein_coding MGP_CBAJ_T0029603.1 MGP_CBAJ_G0018251.1 mouse_genomes_project 11 74965415 74975793 - Gucy2e protein_coding processed_transcript MGP_CBAJ_T0012435.1 MGP_CBAJ_G0010547.1 mouse_genomes_project 11 51256091 51256752 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012516.1 MGP_CBAJ_G0010628.1 mouse_genomes_project 11 81228721 81228889 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012459.1 MGP_CBAJ_G0010571.1 mouse_genomes_project 11 58529115 58529867 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0029576.1 MGP_CBAJ_G0018244.1 mouse_genomes_project 11 74815588 74819483 + MGP_CBAJ_P0029576 Vamp2 protein_coding protein_coding MGP_CBAJ_T0029577.1 MGP_CBAJ_G0018244.1 mouse_genomes_project 11 74815608 74817789 + MGP_CBAJ_P0029577 Vamp2 protein_coding protein_coding MGP_CBAJ_T0029578.1 MGP_CBAJ_G0018244.1 mouse_genomes_project 11 74815620 74816774 + Vamp2 protein_coding retained_intron MGP_CBAJ_T0029579.1 MGP_CBAJ_G0018244.1 mouse_genomes_project 11 74815641 74817149 + Vamp2 protein_coding processed_transcript MGP_CBAJ_T0029580.1 MGP_CBAJ_G0018244.1 mouse_genomes_project 11 74816704 74817275 + Vamp2 protein_coding retained_intron MGP_CBAJ_T0032999.1 MGP_CBAJ_G0019088.1 mouse_genomes_project 11 127461201 127466404 - MGP_CBAJ_P0032999 Cd300c2 protein_coding protein_coding MGP_CBAJ_T0033000.1 MGP_CBAJ_G0019088.1 mouse_genomes_project 11 127461202 127466404 - MGP_CBAJ_P0033000 Cd300c2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030877.1 MGP_CBAJ_G0018558.1 mouse_genomes_project 11 90451510 90461650 + MGP_CBAJ_P0030877 Fndc8 protein_coding protein_coding MGP_CBAJ_T0028159.1 MGP_CBAJ_G0017865.1 mouse_genomes_project 11 33285853 33385122 + MGP_CBAJ_P0028159 Stk10 protein_coding protein_coding MGP_CBAJ_T0028160.1 MGP_CBAJ_G0017865.1 mouse_genomes_project 11 33345770 33355704 + Stk10 protein_coding retained_intron MGP_CBAJ_T0030078.1 MGP_CBAJ_G0018349.1 mouse_genomes_project 11 77169264 77269491 - MGP_CBAJ_P0030078 Nlrp1a protein_coding protein_coding MGP_CBAJ_T0030079.1 MGP_CBAJ_G0018349.1 mouse_genomes_project 11 77169264 77223076 - MGP_CBAJ_P0030079 Nlrp1a protein_coding protein_coding MGP_CBAJ_T0031798.1 MGP_CBAJ_G0018791.1 mouse_genomes_project 11 108615539 108631038 + MGP_CBAJ_P0031798 Gsdma3 protein_coding protein_coding MGP_CBAJ_T0031799.1 MGP_CBAJ_G0018791.1 mouse_genomes_project 11 108615539 108630901 + MGP_CBAJ_P0031799 Gsdma3 protein_coding protein_coding MGP_CBAJ_T0012470.1 MGP_CBAJ_G0010582.1 mouse_genomes_project 11 62806642 62806906 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012580.1 MGP_CBAJ_G0010692.1 mouse_genomes_project 11 112611584 112611983 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0033163.1 MGP_CBAJ_G0019122.1 mouse_genomes_project 11 128433449 128441831 + MGP_CBAJ_P0033163 Tsen54 protein_coding protein_coding MGP_CBAJ_T0033164.1 MGP_CBAJ_G0019122.1 mouse_genomes_project 11 128433449 128441831 + MGP_CBAJ_P0033164 Tsen54 protein_coding protein_coding MGP_CBAJ_T0033165.1 MGP_CBAJ_G0019122.1 mouse_genomes_project 11 128433471 128434271 + Tsen54 protein_coding retained_intron MGP_CBAJ_T0033166.1 MGP_CBAJ_G0019122.1 mouse_genomes_project 11 128433496 128439272 + Tsen54 protein_coding retained_intron MGP_CBAJ_T0033167.1 MGP_CBAJ_G0019122.1 mouse_genomes_project 11 128433530 128439251 + Tsen54 protein_coding retained_intron MGP_CBAJ_T0033168.1 MGP_CBAJ_G0019122.1 mouse_genomes_project 11 128434423 128440443 + MGP_CBAJ_P0033168 Tsen54 protein_coding protein_coding MGP_CBAJ_T0033169.1 MGP_CBAJ_G0019122.1 mouse_genomes_project 11 128439453 128441826 + MGP_CBAJ_P0033169 Tsen54 protein_coding protein_coding MGP_CBAJ_T0033170.1 MGP_CBAJ_G0019122.1 mouse_genomes_project 11 128439589 128441009 + MGP_CBAJ_P0033170 Tsen54 protein_coding protein_coding MGP_CBAJ_T0032288.1 MGP_CBAJ_G0018938.1 mouse_genomes_project 11 112729354 112743440 + MGP_CBAJ_P0032288 Cd300lg protein_coding protein_coding MGP_CBAJ_T0032289.1 MGP_CBAJ_G0018938.1 mouse_genomes_project 11 112729354 112743440 + MGP_CBAJ_P0032289 Cd300lg protein_coding protein_coding MGP_CBAJ_T0032290.1 MGP_CBAJ_G0018938.1 mouse_genomes_project 11 112729354 112738357 + MGP_CBAJ_P0032290 Cd300lg protein_coding protein_coding MGP_CBAJ_T0032291.1 MGP_CBAJ_G0018938.1 mouse_genomes_project 11 112729354 112743440 + MGP_CBAJ_P0032291 Cd300lg protein_coding protein_coding MGP_CBAJ_T0031326.1 MGP_CBAJ_G0018674.1 mouse_genomes_project 11 103091762 103106516 - MGP_CBAJ_P0031326 Nme1 protein_coding protein_coding MGP_CBAJ_T0031327.1 MGP_CBAJ_G0018674.1 mouse_genomes_project 11 103094264 103104042 - MGP_CBAJ_P0031327 Nme1 protein_coding protein_coding MGP_CBAJ_T0031328.1 MGP_CBAJ_G0018674.1 mouse_genomes_project 11 103095471 103106270 - MGP_CBAJ_P0031328 Nme1 protein_coding protein_coding MGP_CBAJ_T0029371.1 MGP_CBAJ_G0018196.1 mouse_genomes_project 11 68869312 68910177 - MGP_CBAJ_P0029371 Hs3st3b1 protein_coding protein_coding MGP_CBAJ_T0033038.1 MGP_CBAJ_G0019100.1 mouse_genomes_project 11 127811622 127840949 + MGP_CBAJ_P0033038 Otop2 protein_coding protein_coding MGP_CBAJ_T0033040.1 MGP_CBAJ_G0019100.1 mouse_genomes_project 11 127827044 127828026 + Otop2 protein_coding processed_transcript MGP_CBAJ_T0033041.1 MGP_CBAJ_G0019100.1 mouse_genomes_project 11 127827275 127828019 + Otop2 protein_coding processed_transcript MGP_CBAJ_T0033042.1 MGP_CBAJ_G0019100.1 mouse_genomes_project 11 127827439 127840949 + MGP_CBAJ_P0033042 Otop2 protein_coding protein_coding MGP_CBAJ_T0003155.1 MGP_CBAJ_G0002925.1 mouse_genomes_project 11 81560531 81563404 - Gm12333 antisense antisense MGP_CBAJ_T0032807.1 MGP_CBAJ_G0019046.1 mouse_genomes_project 11 119999914 120055842 + MGP_CBAJ_P0032807 Apoh protein_coding protein_coding MGP_CBAJ_T0032808.1 MGP_CBAJ_G0019046.1 mouse_genomes_project 11 120040830 120055787 + MGP_CBAJ_P0032808 Apoh protein_coding protein_coding MGP_CBAJ_T0032809.1 MGP_CBAJ_G0019046.1 mouse_genomes_project 11 120040835 120061878 + MGP_CBAJ_P0032809 Apoh protein_coding protein_coding MGP_CBAJ_T0032810.1 MGP_CBAJ_G0019046.1 mouse_genomes_project 11 120055229 120068398 + MGP_CBAJ_P0032810 Apoh protein_coding protein_coding MGP_CBAJ_T0030319.1 MGP_CBAJ_G0018427.1 mouse_genomes_project 11 81708206 81713151 - MGP_CBAJ_P0030319 Hic1 protein_coding protein_coding MGP_CBAJ_T0030320.1 MGP_CBAJ_G0018427.1 mouse_genomes_project 11 81710794 81711788 - Hic1 protein_coding processed_transcript MGP_CBAJ_T0101537.1 MGP_CBAJ_G0039569.1 mouse_genomes_project 11 62251014 62260043 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0028091.1 MGP_CBAJ_G0017848.1 mouse_genomes_project 11 31501675 31512945 - MGP_CBAJ_P0028091 Chac2 protein_coding protein_coding MGP_CBAJ_T0028092.1 MGP_CBAJ_G0017848.1 mouse_genomes_project 11 31501806 31512929 - MGP_CBAJ_P0028092 Chac2 protein_coding protein_coding MGP_CBAJ_T0031072.1 MGP_CBAJ_G0018612.1 mouse_genomes_project 11 94208979 94264762 - MGP_CBAJ_P0031072 Ints2 protein_coding protein_coding MGP_CBAJ_T0031073.1 MGP_CBAJ_G0018612.1 mouse_genomes_project 11 94210386 94263758 - MGP_CBAJ_P0031073 Ints2 protein_coding protein_coding MGP_CBAJ_T0031074.1 MGP_CBAJ_G0018612.1 mouse_genomes_project 11 94218653 94231181 - MGP_CBAJ_P0031074 Ints2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031075.1 MGP_CBAJ_G0018612.1 mouse_genomes_project 11 94226869 94234124 - Ints2 protein_coding retained_intron MGP_CBAJ_T0031076.1 MGP_CBAJ_G0018612.1 mouse_genomes_project 11 94236495 94264753 - Ints2 protein_coding retained_intron MGP_CBAJ_T0031077.1 MGP_CBAJ_G0018612.1 mouse_genomes_project 11 94237435 94243130 - Ints2 protein_coding retained_intron MGP_CBAJ_T0031078.1 MGP_CBAJ_G0018612.1 mouse_genomes_project 11 94255285 94264787 - MGP_CBAJ_P0031078 Ints2 protein_coding protein_coding MGP_CBAJ_T0031079.1 MGP_CBAJ_G0018612.1 mouse_genomes_project 11 94262544 94264766 - MGP_CBAJ_P0031079 Ints2 protein_coding protein_coding MGP_CBAJ_T0031080.1 MGP_CBAJ_G0018612.1 mouse_genomes_project 11 94263237 94264730 - MGP_CBAJ_P0031080 Ints2 protein_coding protein_coding MGP_CBAJ_T0031081.1 MGP_CBAJ_G0018612.1 mouse_genomes_project 11 94263564 94264552 - Ints2 protein_coding retained_intron MGP_CBAJ_T0031082.1 MGP_CBAJ_G0018612.1 mouse_genomes_project 11 94263654 94264777 - Ints2 protein_coding processed_transcript MGP_CBAJ_T0028473.1 MGP_CBAJ_G0017962.1 mouse_genomes_project 11 52600659 52646441 - MGP_CBAJ_P0028473 Cnot6 protein_coding protein_coding MGP_CBAJ_T0028474.1 MGP_CBAJ_G0017962.1 mouse_genomes_project 11 52603854 52634568 - Cnot6 protein_coding processed_transcript MGP_CBAJ_T0028475.1 MGP_CBAJ_G0017962.1 mouse_genomes_project 11 52603869 52646428 - MGP_CBAJ_P0028475 Cnot6 protein_coding protein_coding MGP_CBAJ_T0028476.1 MGP_CBAJ_G0017962.1 mouse_genomes_project 11 52606540 52609241 - Cnot6 protein_coding processed_transcript MGP_CBAJ_T0028477.1 MGP_CBAJ_G0017962.1 mouse_genomes_project 11 52609992 52611565 - Cnot6 protein_coding processed_transcript MGP_CBAJ_T0006294.1 MGP_CBAJ_G0005240.1 mouse_genomes_project 11 135269366 135269568 + Gm29513 lincRNA lincRNA MGP_CBAJ_T0016976.1 MGP_CBAJ_G0014933.1 mouse_genomes_project 11 103288127 103319226 + B230206L02Rik processed_transcript processed_transcript MGP_CBAJ_T0016977.1 MGP_CBAJ_G0014933.1 mouse_genomes_project 11 103288144 103319226 + B230206L02Rik processed_transcript processed_transcript MGP_CBAJ_T0016978.1 MGP_CBAJ_G0014933.1 mouse_genomes_project 11 103290318 103293509 + B230206L02Rik processed_transcript processed_transcript MGP_CBAJ_T0009583.1 MGP_CBAJ_G0007721.1 mouse_genomes_project 11 76163717 76163801 + Mir497 miRNA miRNA MGP_CBAJ_T0098701.1 MGP_CBAJ_G0036956.1 mouse_genomes_project 11 81455030 81455121 - Gm22733 snRNA snRNA MGP_CBAJ_T0003173.1 MGP_CBAJ_G0002941.1 mouse_genomes_project 11 90506139 90524454 - Slfn5os antisense antisense MGP_CBAJ_T0032479.1 MGP_CBAJ_G0018972.1 mouse_genomes_project 11 113857720 113893914 - MGP_CBAJ_P0032479 Dcakd protein_coding protein_coding MGP_CBAJ_T0032480.1 MGP_CBAJ_G0018972.1 mouse_genomes_project 11 113857722 113861214 - Dcakd protein_coding retained_intron MGP_CBAJ_T0032481.1 MGP_CBAJ_G0018972.1 mouse_genomes_project 11 113867150 113909060 - MGP_CBAJ_P0032481 Dcakd protein_coding protein_coding MGP_CBAJ_T0032482.1 MGP_CBAJ_G0018972.1 mouse_genomes_project 11 113907739 113909019 - Dcakd protein_coding retained_intron MGP_CBAJ_T0032483.1 MGP_CBAJ_G0018972.1 mouse_genomes_project 11 113908013 113909089 - Dcakd protein_coding processed_transcript MGP_CBAJ_T0030236.1 MGP_CBAJ_G0018398.1 mouse_genomes_project 11 80157480 80163542 - MGP_CBAJ_P0030236 Olfr391-ps protein_coding protein_coding MGP_CBAJ_T0098267.1 MGP_CBAJ_G0036538.1 mouse_genomes_project 11 120037543 120038605 + Gm11656 sense_intronic sense_intronic MGP_CBAJ_T0098268.1 MGP_CBAJ_G0036538.1 mouse_genomes_project 11 120037559 120040760 + Gm11656 sense_intronic sense_intronic MGP_CBAJ_T0003064.1 MGP_CBAJ_G0002847.1 mouse_genomes_project 11 28515451 28519421 + Gm12081 antisense antisense MGP_CBAJ_T0030413.1 MGP_CBAJ_G0018449.1 mouse_genomes_project 11 82696835 82708383 - MGP_CBAJ_P0030413 Fam101b protein_coding protein_coding MGP_CBAJ_T0030251.1 MGP_CBAJ_G0018408.1 mouse_genomes_project 11 80457627 80469935 + MGP_CBAJ_P0030251 Zfp616 protein_coding protein_coding MGP_CBAJ_T0030252.1 MGP_CBAJ_G0018408.1 mouse_genomes_project 11 80457837 80469156 + Zfp616 protein_coding processed_transcript MGP_CBAJ_T0030253.1 MGP_CBAJ_G0018408.1 mouse_genomes_project 11 80457857 80468884 + MGP_CBAJ_P0030253 Zfp616 protein_coding protein_coding MGP_CBAJ_T0030254.1 MGP_CBAJ_G0018408.1 mouse_genomes_project 11 80468686 80472522 + MGP_CBAJ_P0030254 Zfp616 protein_coding protein_coding MGP_CBAJ_T0016980.1 MGP_CBAJ_G0014935.1 mouse_genomes_project 11 105311507 105313679 + 4833417C18Rik processed_transcript processed_transcript MGP_CBAJ_T0031623.1 MGP_CBAJ_G0018750.1 mouse_genomes_project 11 106794477 106813326 - MGP_CBAJ_P0031623 Tbx21 protein_coding protein_coding MGP_CBAJ_T0028753.1 MGP_CBAJ_G0018032.1 mouse_genomes_project 11 57413509 57425965 - Gm12216 protein_coding processed_transcript MGP_CBAJ_T0028754.1 MGP_CBAJ_G0018032.1 mouse_genomes_project 11 57414382 57500378 - Gm12216 protein_coding processed_transcript MGP_CBAJ_T0028755.1 MGP_CBAJ_G0018032.1 mouse_genomes_project 11 57415594 57500490 - MGP_CBAJ_P0028755 Gm12216 protein_coding protein_coding MGP_CBAJ_T0028756.1 MGP_CBAJ_G0018032.1 mouse_genomes_project 11 57433702 57500463 - Gm12216 protein_coding processed_transcript MGP_CBAJ_T0028757.1 MGP_CBAJ_G0018032.1 mouse_genomes_project 11 57446402 57500490 - MGP_CBAJ_P0028757 Gm12216 protein_coding protein_coding MGP_CBAJ_T0028758.1 MGP_CBAJ_G0018032.1 mouse_genomes_project 11 57450104 57500490 - MGP_CBAJ_P0028758 Gm12216 protein_coding protein_coding MGP_CBAJ_T0033557.1 MGP_CBAJ_G0019198.1 mouse_genomes_project 11 132387787 132407440 - MGP_CBAJ_P0033557 Eif4a3 protein_coding protein_coding MGP_CBAJ_T0033558.1 MGP_CBAJ_G0019198.1 mouse_genomes_project 11 132387788 132388882 - Eif4a3 protein_coding processed_transcript MGP_CBAJ_T0033559.1 MGP_CBAJ_G0019198.1 mouse_genomes_project 11 132387788 132388816 - Eif4a3 protein_coding processed_transcript MGP_CBAJ_T0033560.1 MGP_CBAJ_G0019198.1 mouse_genomes_project 11 132387967 132407347 - MGP_CBAJ_P0033560 Eif4a3 protein_coding unknown_likely_coding MGP_CBAJ_T0033561.1 MGP_CBAJ_G0019198.1 mouse_genomes_project 11 132399846 132400961 - Eif4a3 protein_coding processed_transcript MGP_CBAJ_T0033562.1 MGP_CBAJ_G0019198.1 mouse_genomes_project 11 132400207 132407365 - MGP_CBAJ_P0033562 Eif4a3 protein_coding protein_coding MGP_CBAJ_T0033563.1 MGP_CBAJ_G0019198.1 mouse_genomes_project 11 132405027 132407369 - Eif4a3 protein_coding processed_transcript MGP_CBAJ_T0033113.1 MGP_CBAJ_G0019115.1 mouse_genomes_project 11 128151234 128174838 - MGP_CBAJ_P0033113 Gga3 protein_coding protein_coding MGP_CBAJ_T0033114.1 MGP_CBAJ_G0019115.1 mouse_genomes_project 11 128151234 128174838 - MGP_CBAJ_P0033114 Gga3 protein_coding protein_coding MGP_CBAJ_T0033115.1 MGP_CBAJ_G0019115.1 mouse_genomes_project 11 128151234 128174838 - MGP_CBAJ_P0033115 Gga3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033116.1 MGP_CBAJ_G0019115.1 mouse_genomes_project 11 128151343 128160312 - Gga3 protein_coding processed_transcript MGP_CBAJ_T0033117.1 MGP_CBAJ_G0019115.1 mouse_genomes_project 11 128152683 128156035 - Gga3 protein_coding processed_transcript MGP_CBAJ_T0033118.1 MGP_CBAJ_G0019115.1 mouse_genomes_project 11 128152766 128174671 - Gga3 protein_coding processed_transcript MGP_CBAJ_T0033119.1 MGP_CBAJ_G0019115.1 mouse_genomes_project 11 128154564 128155007 - Gga3 protein_coding processed_transcript MGP_CBAJ_T0033120.1 MGP_CBAJ_G0019115.1 mouse_genomes_project 11 128154915 128174663 - Gga3 protein_coding processed_transcript MGP_CBAJ_T0033121.1 MGP_CBAJ_G0019115.1 mouse_genomes_project 11 128155456 128174675 - Gga3 protein_coding processed_transcript MGP_CBAJ_T0033122.1 MGP_CBAJ_G0019115.1 mouse_genomes_project 11 128162432 128174680 - MGP_CBAJ_P0033122 Gga3 protein_coding protein_coding MGP_CBAJ_T0033123.1 MGP_CBAJ_G0019115.1 mouse_genomes_project 11 128163289 128174511 - Gga3 protein_coding processed_transcript MGP_CBAJ_T0033124.1 MGP_CBAJ_G0019115.1 mouse_genomes_project 11 128163307 128174667 - Gga3 protein_coding processed_transcript MGP_CBAJ_T0012497.1 MGP_CBAJ_G0010609.1 mouse_genomes_project 11 75440405 75440587 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0027870.1 MGP_CBAJ_G0017801.1 mouse_genomes_project 11 20609618 20666882 - MGP_CBAJ_P0027870 Ugp2 protein_coding protein_coding MGP_CBAJ_T0027871.1 MGP_CBAJ_G0017801.1 mouse_genomes_project 11 20610153 20667606 - MGP_CBAJ_P0027871 Ugp2 protein_coding protein_coding MGP_CBAJ_T0027872.1 MGP_CBAJ_G0017801.1 mouse_genomes_project 11 20610404 20618379 - Ugp2 protein_coding processed_transcript MGP_CBAJ_T0027873.1 MGP_CBAJ_G0017801.1 mouse_genomes_project 11 20610420 20611983 - Ugp2 protein_coding processed_transcript MGP_CBAJ_T0101264.1 MGP_CBAJ_G0039394.1 mouse_genomes_project 11 80668941 80688965 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101265.1 MGP_CBAJ_G0039394.1 mouse_genomes_project 11 80669416 80670352 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0032552.1 MGP_CBAJ_G0018988.1 mouse_genomes_project 11 114698160 114720620 - MGP_CBAJ_P0032552 Wnt9b protein_coding protein_coding MGP_CBAJ_T0012554.1 MGP_CBAJ_G0010666.1 mouse_genomes_project 11 96838594 96839130 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0028210.1 MGP_CBAJ_G0017882.1 mouse_genomes_project 11 36223644 36836443 + MGP_CBAJ_P0028210 Slit3 protein_coding protein_coding MGP_CBAJ_T0028211.1 MGP_CBAJ_G0017882.1 mouse_genomes_project 11 36276424 36340907 + Slit3 protein_coding processed_transcript MGP_CBAJ_T0028212.1 MGP_CBAJ_G0017882.1 mouse_genomes_project 11 36282584 36624765 + Slit3 protein_coding processed_transcript MGP_CBAJ_T0028213.1 MGP_CBAJ_G0017882.1 mouse_genomes_project 11 36661716 36735432 + Slit3 protein_coding processed_transcript MGP_CBAJ_T0029604.1 MGP_CBAJ_G0018252.1 mouse_genomes_project 11 75050198 75051202 - Cntrob protein_coding retained_intron MGP_CBAJ_T0029605.1 MGP_CBAJ_G0018252.1 mouse_genomes_project 11 75050198 75074479 - MGP_CBAJ_P0029605 Cntrob protein_coding protein_coding MGP_CBAJ_T0029606.1 MGP_CBAJ_G0018252.1 mouse_genomes_project 11 75050198 75074479 - MGP_CBAJ_P0029606 Cntrob protein_coding nonsense_mediated_decay MGP_CBAJ_T0029607.1 MGP_CBAJ_G0018252.1 mouse_genomes_project 11 75050251 75070172 - MGP_CBAJ_P0029607 Cntrob protein_coding protein_coding MGP_CBAJ_T0029608.1 MGP_CBAJ_G0018252.1 mouse_genomes_project 11 75050412 75053866 - MGP_CBAJ_P0029608 Cntrob protein_coding protein_coding MGP_CBAJ_T0029609.1 MGP_CBAJ_G0018252.1 mouse_genomes_project 11 75052228 75055689 - Cntrob protein_coding retained_intron MGP_CBAJ_T0029610.1 MGP_CBAJ_G0018252.1 mouse_genomes_project 11 75059117 75060146 - MGP_CBAJ_P0029610 Cntrob protein_coding protein_coding MGP_CBAJ_T0029611.1 MGP_CBAJ_G0018252.1 mouse_genomes_project 11 75060747 75065842 - Cntrob protein_coding retained_intron MGP_CBAJ_T0029612.1 MGP_CBAJ_G0018252.1 mouse_genomes_project 11 75065480 75070777 - Cntrob protein_coding retained_intron MGP_CBAJ_T0029613.1 MGP_CBAJ_G0018252.1 mouse_genomes_project 11 75065896 75070190 - Cntrob protein_coding retained_intron MGP_CBAJ_T0003103.1 MGP_CBAJ_G0002883.1 mouse_genomes_project 11 61724945 61749145 - 4933424L21Rik antisense antisense MGP_CBAJ_T0006161.1 MGP_CBAJ_G0005141.1 mouse_genomes_project 11 66589828 66591993 + Gm26964 lincRNA lincRNA MGP_CBAJ_T0033871.1 MGP_CBAJ_G0019256.1 mouse_genomes_project 11 134433316 134444346 - MGP_CBAJ_P0033871 Sectm1a protein_coding protein_coding MGP_CBAJ_T0033872.1 MGP_CBAJ_G0019256.1 mouse_genomes_project 11 134433316 134444265 - MGP_CBAJ_P0033872 Sectm1a protein_coding protein_coding MGP_CBAJ_T0033873.1 MGP_CBAJ_G0019256.1 mouse_genomes_project 11 134433826 134444262 - MGP_CBAJ_P0033873 Sectm1a protein_coding protein_coding MGP_CBAJ_T0033874.1 MGP_CBAJ_G0019256.1 mouse_genomes_project 11 134433844 134444256 - MGP_CBAJ_P0033874 Sectm1a protein_coding protein_coding MGP_CBAJ_T0033875.1 MGP_CBAJ_G0019256.1 mouse_genomes_project 11 134434945 134444251 - Sectm1a protein_coding processed_transcript MGP_CBAJ_T0009563.1 MGP_CBAJ_G0007701.1 mouse_genomes_project 11 59401814 59401870 + Mir7652 miRNA miRNA MGP_CBAJ_T0031192.1 MGP_CBAJ_G0018637.1 mouse_genomes_project 11 96011143 96029986 + MGP_CBAJ_P0031192 Mpo protein_coding protein_coding MGP_CBAJ_T0031193.1 MGP_CBAJ_G0018637.1 mouse_genomes_project 11 96011404 96013616 + MGP_CBAJ_P0031193 Mpo protein_coding protein_coding MGP_CBAJ_T0031194.1 MGP_CBAJ_G0018637.1 mouse_genomes_project 11 96011818 96029986 + MGP_CBAJ_P0031194 Mpo protein_coding protein_coding MGP_CBAJ_T0031195.1 MGP_CBAJ_G0018637.1 mouse_genomes_project 11 96012767 96021258 + MGP_CBAJ_P0031195 Mpo protein_coding nonsense_mediated_decay MGP_CBAJ_T0031196.1 MGP_CBAJ_G0018637.1 mouse_genomes_project 11 96028114 96029398 + MGP_CBAJ_P0031196 Mpo protein_coding protein_coding MGP_CBAJ_T0031197.1 MGP_CBAJ_G0018637.1 mouse_genomes_project 11 96028689 96029946 + Mpo protein_coding retained_intron MGP_CBAJ_T0012333.1 MGP_CBAJ_G0010445.1 mouse_genomes_project 11 7777966 7778399 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009629.1 MGP_CBAJ_G0007767.1 mouse_genomes_project 11 111900845 111900941 - Gm25593 miRNA miRNA MGP_CBAJ_T0031525.1 MGP_CBAJ_G0018723.1 mouse_genomes_project 11 105571619 105581567 - MGP_CBAJ_P0031525 Atp5g1 protein_coding protein_coding MGP_CBAJ_T0031526.1 MGP_CBAJ_G0018723.1 mouse_genomes_project 11 105571634 105580931 - MGP_CBAJ_P0031526 Atp5g1 protein_coding protein_coding MGP_CBAJ_T0031527.1 MGP_CBAJ_G0018723.1 mouse_genomes_project 11 105575807 105581478 - MGP_CBAJ_P0031527 Atp5g1 protein_coding protein_coding MGP_CBAJ_T0031528.1 MGP_CBAJ_G0018723.1 mouse_genomes_project 11 105575810 105581516 - MGP_CBAJ_P0031528 Atp5g1 protein_coding protein_coding MGP_CBAJ_T0032893.1 MGP_CBAJ_G0019063.1 mouse_genomes_project 11 122056371 122140394 - MGP_CBAJ_P0032893 Abca6 protein_coding protein_coding MGP_CBAJ_T0032894.1 MGP_CBAJ_G0019063.1 mouse_genomes_project 11 122122469 122140394 - Abca6 protein_coding processed_transcript MGP_CBAJ_T0011675.1 MGP_CBAJ_G0009809.1 mouse_genomes_project 11 80640951 80641923 + MGP_CBAJ_P0011675 Olfr404-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0033608.1 MGP_CBAJ_G0019207.1 mouse_genomes_project 11 133147965 133220040 + MGP_CBAJ_P0033608 Baiap2 protein_coding protein_coding MGP_CBAJ_T0033609.1 MGP_CBAJ_G0019207.1 mouse_genomes_project 11 133147965 133220040 + MGP_CBAJ_P0033609 Baiap2 protein_coding protein_coding MGP_CBAJ_T0033610.1 MGP_CBAJ_G0019207.1 mouse_genomes_project 11 133147965 133215879 + MGP_CBAJ_P0033610 Baiap2 protein_coding protein_coding MGP_CBAJ_T0033611.1 MGP_CBAJ_G0019207.1 mouse_genomes_project 11 133147965 133215879 + MGP_CBAJ_P0033611 Baiap2 protein_coding protein_coding MGP_CBAJ_T0033612.1 MGP_CBAJ_G0019207.1 mouse_genomes_project 11 133147965 133215879 + MGP_CBAJ_P0033612 Baiap2 protein_coding protein_coding MGP_CBAJ_T0033613.1 MGP_CBAJ_G0019207.1 mouse_genomes_project 11 133148318 133169039 + Baiap2 protein_coding processed_transcript MGP_CBAJ_T0033614.1 MGP_CBAJ_G0019207.1 mouse_genomes_project 11 133148674 133194681 + Baiap2 protein_coding processed_transcript MGP_CBAJ_T0033615.1 MGP_CBAJ_G0019207.1 mouse_genomes_project 11 133168527 133168894 + Baiap2 protein_coding processed_transcript MGP_CBAJ_T0033616.1 MGP_CBAJ_G0019207.1 mouse_genomes_project 11 133210927 133215457 + Baiap2 protein_coding processed_transcript MGP_CBAJ_T0012369.1 MGP_CBAJ_G0010481.1 mouse_genomes_project 11 20579266 20579567 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0029389.1 MGP_CBAJ_G0018203.1 mouse_genomes_project 11 70325418 70426769 - MGP_CBAJ_P0029389 Myocd protein_coding protein_coding MGP_CBAJ_T0029390.1 MGP_CBAJ_G0018203.1 mouse_genomes_project 11 70325427 70426817 - MGP_CBAJ_P0029390 Myocd protein_coding protein_coding MGP_CBAJ_T0029391.1 MGP_CBAJ_G0018203.1 mouse_genomes_project 11 70325622 70331031 - Myocd protein_coding processed_transcript MGP_CBAJ_T0029392.1 MGP_CBAJ_G0018203.1 mouse_genomes_project 11 70327295 70366957 - MGP_CBAJ_P0029392 Myocd protein_coding protein_coding MGP_CBAJ_T0029393.1 MGP_CBAJ_G0018203.1 mouse_genomes_project 11 70344812 70353944 - MGP_CBAJ_P0029393 Myocd protein_coding protein_coding MGP_CBAJ_T0029394.1 MGP_CBAJ_G0018203.1 mouse_genomes_project 11 70372129 70426682 - Myocd protein_coding processed_transcript MGP_CBAJ_T0030710.1 MGP_CBAJ_G0018513.1 mouse_genomes_project 11 85676417 85806328 - MGP_CBAJ_P0030710 Nlk protein_coding protein_coding MGP_CBAJ_T0030711.1 MGP_CBAJ_G0018513.1 mouse_genomes_project 11 85676651 85678272 - Nlk protein_coding processed_transcript MGP_CBAJ_T0030712.1 MGP_CBAJ_G0018513.1 mouse_genomes_project 11 85676663 85681755 - MGP_CBAJ_P0030712 Nlk protein_coding protein_coding MGP_CBAJ_T0030713.1 MGP_CBAJ_G0018513.1 mouse_genomes_project 11 85726652 85805448 - Nlk protein_coding retained_intron MGP_CBAJ_T0098668.1 MGP_CBAJ_G0036923.1 mouse_genomes_project 11 10364864 10365020 - Gm24036 snRNA snRNA MGP_CBAJ_T0033918.1 MGP_CBAJ_G0019270.1 mouse_genomes_project 11 134921864 134930217 - MGP_CBAJ_P0033918 Zfp750 protein_coding protein_coding MGP_CBAJ_T0016891.1 MGP_CBAJ_G0014888.1 mouse_genomes_project 11 645513 646183 + Gm11947 processed_transcript processed_transcript MGP_CBAJ_T0030082.1 MGP_CBAJ_G0018351.1 mouse_genomes_project 11 77851390 77861583 + MGP_CBAJ_P0030082 Wscd1 protein_coding protein_coding MGP_CBAJ_T0030083.1 MGP_CBAJ_G0018351.1 mouse_genomes_project 11 77852155 77890879 + MGP_CBAJ_P0030083 Wscd1 protein_coding protein_coding MGP_CBAJ_T0030084.1 MGP_CBAJ_G0018351.1 mouse_genomes_project 11 77852450 77890879 + MGP_CBAJ_P0030084 Wscd1 protein_coding protein_coding MGP_CBAJ_T0030085.1 MGP_CBAJ_G0018351.1 mouse_genomes_project 11 77852846 77862439 + Wscd1 protein_coding retained_intron MGP_CBAJ_T0030086.1 MGP_CBAJ_G0018351.1 mouse_genomes_project 11 77852846 77890879 + MGP_CBAJ_P0030086 Wscd1 protein_coding protein_coding MGP_CBAJ_T0030087.1 MGP_CBAJ_G0018351.1 mouse_genomes_project 11 77870146 77886517 + Wscd1 protein_coding processed_transcript MGP_CBAJ_T0012602.1 MGP_CBAJ_G0010714.1 mouse_genomes_project 11 120718773 120719904 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0031686.1 MGP_CBAJ_G0018764.1 mouse_genomes_project 11 107530937 107560134 - MGP_CBAJ_P0031686 Pip4k2b protein_coding protein_coding MGP_CBAJ_T0031687.1 MGP_CBAJ_G0018764.1 mouse_genomes_project 11 107536164 107542336 - Pip4k2b protein_coding processed_transcript MGP_CBAJ_T0028153.1 MGP_CBAJ_G0017862.1 mouse_genomes_project 11 33079756 33166228 + MGP_CBAJ_P0028153 Sh3pxd2b protein_coding protein_coding MGP_CBAJ_T0028154.1 MGP_CBAJ_G0017862.1 mouse_genomes_project 11 33079776 33124906 + Sh3pxd2b protein_coding retained_intron MGP_CBAJ_T0028155.1 MGP_CBAJ_G0017862.1 mouse_genomes_project 11 33079830 33166095 + MGP_CBAJ_P0028155 Sh3pxd2b protein_coding unknown_likely_coding MGP_CBAJ_T0012344.1 MGP_CBAJ_G0010456.1 mouse_genomes_project 11 14145225 14156927 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099926.1 MGP_CBAJ_G0038181.1 mouse_genomes_project 11 62950140 62950272 + Gm22599 snoRNA snoRNA MGP_CBAJ_T0009652.1 MGP_CBAJ_G0007790.1 mouse_genomes_project 11 133227963 133228061 - Mir338 miRNA miRNA MGP_CBAJ_T0003184.1 MGP_CBAJ_G0002948.1 mouse_genomes_project 11 96319069 96386814 - antisense antisense MGP_CBAJ_T0009619.1 MGP_CBAJ_G0007757.1 mouse_genomes_project 11 107461675 107465176 - miRNA miRNA MGP_CBAJ_T0028761.1 MGP_CBAJ_G0018035.1 mouse_genomes_project 11 57693274 57746436 - MGP_CBAJ_P0028761 Slc22a4 protein_coding protein_coding MGP_CBAJ_T0028762.1 MGP_CBAJ_G0018035.1 mouse_genomes_project 11 57702110 57720753 - Slc22a4 protein_coding processed_transcript MGP_CBAJ_T0028763.1 MGP_CBAJ_G0018035.1 mouse_genomes_project 11 57727084 57746298 - Slc22a4 protein_coding processed_transcript MGP_CBAJ_T0000808.1 MGP_CBAJ_G0000744.1 mouse_genomes_project 11 17788540 17790097 - TEC TEC MGP_CBAJ_T0028083.1 MGP_CBAJ_G0017847.1 mouse_genomes_project 11 31451505 31476991 - MGP_CBAJ_P0028083 Erlec1 protein_coding protein_coding MGP_CBAJ_T0028084.1 MGP_CBAJ_G0017847.1 mouse_genomes_project 11 31452485 31471291 - MGP_CBAJ_P0028084 Erlec1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028085.1 MGP_CBAJ_G0017847.1 mouse_genomes_project 11 31455663 31470907 - MGP_CBAJ_P0028085 Erlec1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028086.1 MGP_CBAJ_G0017847.1 mouse_genomes_project 11 31465532 31471024 - Erlec1 protein_coding retained_intron MGP_CBAJ_T0028087.1 MGP_CBAJ_G0017847.1 mouse_genomes_project 11 31475851 31479514 - Erlec1 protein_coding processed_transcript MGP_CBAJ_T0012378.1 MGP_CBAJ_G0010490.1 mouse_genomes_project 11 22283441 22283878 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0030220.1 MGP_CBAJ_G0018388.1 mouse_genomes_project 11 79674992 79679480 + MGP_CBAJ_P0030220 Olfr376 protein_coding protein_coding MGP_CBAJ_T0030221.1 MGP_CBAJ_G0018388.1 mouse_genomes_project 11 79674992 79679480 + MGP_CBAJ_P0030221 Olfr376 protein_coding protein_coding MGP_CBAJ_T0028404.1 MGP_CBAJ_G0017934.1 mouse_genomes_project 11 51633815 51656907 - MGP_CBAJ_P0028404 protein_coding protein_coding MGP_CBAJ_T0029880.1 MGP_CBAJ_G0018312.1 mouse_genomes_project 11 76164196 76166800 - MGP_CBAJ_P0029880 0610010K14Rik protein_coding protein_coding MGP_CBAJ_T0029882.1 MGP_CBAJ_G0018312.1 mouse_genomes_project 11 76164204 76166910 - MGP_CBAJ_P0029882 0610010K14Rik protein_coding protein_coding MGP_CBAJ_T0029883.1 MGP_CBAJ_G0018312.1 mouse_genomes_project 11 76164204 76166900 - MGP_CBAJ_P0029883 0610010K14Rik protein_coding protein_coding MGP_CBAJ_T0029884.1 MGP_CBAJ_G0018312.1 mouse_genomes_project 11 76164204 76166849 - MGP_CBAJ_P0029884 0610010K14Rik protein_coding protein_coding MGP_CBAJ_T0029885.1 MGP_CBAJ_G0018312.1 mouse_genomes_project 11 76164204 76165195 - MGP_CBAJ_P0029885 0610010K14Rik protein_coding protein_coding MGP_CBAJ_T0029887.1 MGP_CBAJ_G0018312.1 mouse_genomes_project 11 76164360 76166674 - MGP_CBAJ_P0029887 0610010K14Rik protein_coding protein_coding MGP_CBAJ_T0029888.1 MGP_CBAJ_G0018312.1 mouse_genomes_project 11 76164369 76166485 - 0610010K14Rik protein_coding processed_transcript MGP_CBAJ_T0029889.1 MGP_CBAJ_G0018312.1 mouse_genomes_project 11 76164377 76166759 - 0610010K14Rik protein_coding processed_transcript MGP_CBAJ_T0029890.1 MGP_CBAJ_G0018312.1 mouse_genomes_project 11 76164734 76166857 - MGP_CBAJ_P0029890 0610010K14Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0029891.1 MGP_CBAJ_G0018312.1 mouse_genomes_project 11 76165449 76166908 - 0610010K14Rik protein_coding retained_intron MGP_CBAJ_T0101564.1 MGP_CBAJ_G0039596.1 mouse_genomes_project 11 110188777 110188980 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0032346.1 MGP_CBAJ_G0018949.1 mouse_genomes_project 11 113000663 113004970 + MGP_CBAJ_P0032346 Tmub2 protein_coding protein_coding MGP_CBAJ_T0032347.1 MGP_CBAJ_G0018949.1 mouse_genomes_project 11 113000671 113003944 + Tmub2 protein_coding processed_transcript MGP_CBAJ_T0032348.1 MGP_CBAJ_G0018949.1 mouse_genomes_project 11 113000671 113004970 + MGP_CBAJ_P0032348 Tmub2 protein_coding protein_coding MGP_CBAJ_T0032349.1 MGP_CBAJ_G0018949.1 mouse_genomes_project 11 113000683 113003124 + Tmub2 protein_coding processed_transcript MGP_CBAJ_T0032350.1 MGP_CBAJ_G0018949.1 mouse_genomes_project 11 113000928 113004970 + MGP_CBAJ_P0032350 Tmub2 protein_coding protein_coding MGP_CBAJ_T0012354.1 MGP_CBAJ_G0010466.1 mouse_genomes_project 11 17406131 17410166 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0030226.1 MGP_CBAJ_G0018392.1 mouse_genomes_project 11 79837041 79837980 - MGP_CBAJ_P0030226 Olfr382 protein_coding protein_coding MGP_CBAJ_T0030714.1 MGP_CBAJ_G0018514.1 mouse_genomes_project 11 85862190 85863414 - MGP_CBAJ_P0030714 Fam58b protein_coding protein_coding MGP_CBAJ_T0029193.1 MGP_CBAJ_G0018164.1 mouse_genomes_project 11 65995527 66032982 - MGP_CBAJ_P0029193 Slc47a1 protein_coding protein_coding MGP_CBAJ_T0029194.1 MGP_CBAJ_G0018164.1 mouse_genomes_project 11 65995528 66032965 - MGP_CBAJ_P0029194 Slc47a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029195.1 MGP_CBAJ_G0018164.1 mouse_genomes_project 11 66017682 66020585 - Slc47a1 protein_coding processed_transcript MGP_CBAJ_T0029196.1 MGP_CBAJ_G0018164.1 mouse_genomes_project 11 66017859 66033246 - MGP_CBAJ_P0029196 Slc47a1 protein_coding protein_coding MGP_CBAJ_T0030329.1 MGP_CBAJ_G0018431.1 mouse_genomes_project 11 81846973 81902472 - MGP_CBAJ_P0030329 Rpa1 protein_coding protein_coding MGP_CBAJ_T0030330.1 MGP_CBAJ_G0018431.1 mouse_genomes_project 11 81849157 81902458 - MGP_CBAJ_P0030330 Rpa1 protein_coding protein_coding MGP_CBAJ_T0030331.1 MGP_CBAJ_G0018431.1 mouse_genomes_project 11 81850114 81893349 - Rpa1 protein_coding processed_transcript MGP_CBAJ_T0030332.1 MGP_CBAJ_G0018431.1 mouse_genomes_project 11 81866950 81902443 - Rpa1 protein_coding retained_intron MGP_CBAJ_T0030333.1 MGP_CBAJ_G0018431.1 mouse_genomes_project 11 81893138 81902441 - Rpa1 protein_coding processed_transcript MGP_CBAJ_T0031777.1 MGP_CBAJ_G0018785.1 mouse_genomes_project 11 108352942 108380862 + MGP_CBAJ_P0031777 Erbb2 protein_coding protein_coding MGP_CBAJ_T0031778.1 MGP_CBAJ_G0018785.1 mouse_genomes_project 11 108352965 108380223 + Erbb2 protein_coding processed_transcript MGP_CBAJ_T0031779.1 MGP_CBAJ_G0018785.1 mouse_genomes_project 11 108367512 108368005 + Erbb2 protein_coding processed_transcript MGP_CBAJ_T0029721.1 MGP_CBAJ_G0018279.1 mouse_genomes_project 11 75603029 75620762 + MGP_CBAJ_P0029721 Zbtb4 protein_coding protein_coding MGP_CBAJ_T0029722.1 MGP_CBAJ_G0018279.1 mouse_genomes_project 11 75603029 75624573 + MGP_CBAJ_P0029722 Zbtb4 protein_coding protein_coding MGP_CBAJ_T0029723.1 MGP_CBAJ_G0018279.1 mouse_genomes_project 11 75603101 75622501 + MGP_CBAJ_P0029723 Zbtb4 protein_coding protein_coding MGP_CBAJ_T0029724.1 MGP_CBAJ_G0018279.1 mouse_genomes_project 11 75603123 75618862 + MGP_CBAJ_P0029724 Zbtb4 protein_coding protein_coding MGP_CBAJ_T0029725.1 MGP_CBAJ_G0018279.1 mouse_genomes_project 11 75603556 75616591 + MGP_CBAJ_P0029725 Zbtb4 protein_coding protein_coding MGP_CBAJ_T0029726.1 MGP_CBAJ_G0018279.1 mouse_genomes_project 11 75603651 75616575 + MGP_CBAJ_P0029726 Zbtb4 protein_coding protein_coding MGP_CBAJ_T0029727.1 MGP_CBAJ_G0018279.1 mouse_genomes_project 11 75615958 75620226 + MGP_CBAJ_P0029727 Zbtb4 protein_coding protein_coding MGP_CBAJ_T0027366.1 MGP_CBAJ_G0017685.1 mouse_genomes_project 11 430235 460904 - Limk2 protein_coding processed_transcript MGP_CBAJ_T0027367.1 MGP_CBAJ_G0017685.1 mouse_genomes_project 11 430235 501613 - MGP_CBAJ_P0027367 Limk2 protein_coding protein_coding MGP_CBAJ_T0027368.1 MGP_CBAJ_G0017685.1 mouse_genomes_project 11 430235 460904 - MGP_CBAJ_P0027368 Limk2 protein_coding protein_coding MGP_CBAJ_T0027369.1 MGP_CBAJ_G0017685.1 mouse_genomes_project 11 431719 460549 - MGP_CBAJ_P0027369 Limk2 protein_coding protein_coding MGP_CBAJ_T0027370.1 MGP_CBAJ_G0017685.1 mouse_genomes_project 11 439397 441771 - Limk2 protein_coding processed_transcript MGP_CBAJ_T0027371.1 MGP_CBAJ_G0017685.1 mouse_genomes_project 11 441723 444822 - Limk2 protein_coding processed_transcript MGP_CBAJ_T0027372.1 MGP_CBAJ_G0017685.1 mouse_genomes_project 11 442361 445157 - Limk2 protein_coding processed_transcript MGP_CBAJ_T0027373.1 MGP_CBAJ_G0017685.1 mouse_genomes_project 11 444821 501613 - Limk2 protein_coding processed_transcript MGP_CBAJ_T0027374.1 MGP_CBAJ_G0017685.1 mouse_genomes_project 11 447779 458690 - Limk2 protein_coding processed_transcript MGP_CBAJ_T0027375.1 MGP_CBAJ_G0017685.1 mouse_genomes_project 11 450062 460863 - Limk2 protein_coding processed_transcript MGP_CBAJ_T0027376.1 MGP_CBAJ_G0017685.1 mouse_genomes_project 11 489319 501628 - Limk2 protein_coding processed_transcript MGP_CBAJ_T0098686.1 MGP_CBAJ_G0036941.1 mouse_genomes_project 11 58218900 58219008 + Gm24198 snRNA snRNA MGP_CBAJ_T0029133.1 MGP_CBAJ_G0018151.1 mouse_genomes_project 11 65301266 65342128 - MGP_CBAJ_P0029133 Top3a protein_coding protein_coding MGP_CBAJ_T0029134.1 MGP_CBAJ_G0018151.1 mouse_genomes_project 11 65301267 65342050 - MGP_CBAJ_P0029134 Top3a protein_coding protein_coding MGP_CBAJ_T0029135.1 MGP_CBAJ_G0018151.1 mouse_genomes_project 11 65303100 65342028 - MGP_CBAJ_P0029135 Top3a protein_coding protein_coding MGP_CBAJ_T0029136.1 MGP_CBAJ_G0018151.1 mouse_genomes_project 11 65303441 65342027 - MGP_CBAJ_P0029136 Top3a protein_coding protein_coding MGP_CBAJ_T0029137.1 MGP_CBAJ_G0018151.1 mouse_genomes_project 11 65310672 65313892 - Top3a protein_coding retained_intron MGP_CBAJ_T0029138.1 MGP_CBAJ_G0018151.1 mouse_genomes_project 11 65324459 65342062 - MGP_CBAJ_P0029138 Top3a protein_coding protein_coding MGP_CBAJ_T0032345.1 MGP_CBAJ_G0018948.1 mouse_genomes_project 11 112977633 112991499 + MGP_CBAJ_P0032345 Asb16 protein_coding protein_coding MGP_CBAJ_T0006193.1 MGP_CBAJ_G0005167.1 mouse_genomes_project 11 85534162 85534957 + Gm11195 lincRNA lincRNA MGP_CBAJ_T0031676.1 MGP_CBAJ_G0018762.1 mouse_genomes_project 11 107500982 107511638 - MGP_CBAJ_P0031676 Pcgf2 protein_coding protein_coding MGP_CBAJ_T0031677.1 MGP_CBAJ_G0018762.1 mouse_genomes_project 11 107500982 107511443 - MGP_CBAJ_P0031677 Pcgf2 protein_coding protein_coding MGP_CBAJ_T0031678.1 MGP_CBAJ_G0018762.1 mouse_genomes_project 11 107501856 107512430 - MGP_CBAJ_P0031678 Pcgf2 protein_coding protein_coding MGP_CBAJ_T0031679.1 MGP_CBAJ_G0018762.1 mouse_genomes_project 11 107501856 107511638 - MGP_CBAJ_P0031679 Pcgf2 protein_coding protein_coding MGP_CBAJ_T0031680.1 MGP_CBAJ_G0018762.1 mouse_genomes_project 11 107502023 107506046 - MGP_CBAJ_P0031680 Pcgf2 protein_coding protein_coding MGP_CBAJ_T0031681.1 MGP_CBAJ_G0018762.1 mouse_genomes_project 11 107502564 107504454 - Pcgf2 protein_coding processed_transcript MGP_CBAJ_T0031682.1 MGP_CBAJ_G0018762.1 mouse_genomes_project 11 107509254 107511638 - Pcgf2 protein_coding processed_transcript MGP_CBAJ_T0033540.1 MGP_CBAJ_G0019196.1 mouse_genomes_project 11 132303130 132306260 + Ccdc40 protein_coding processed_transcript MGP_CBAJ_T0033541.1 MGP_CBAJ_G0019196.1 mouse_genomes_project 11 132303136 132306176 + Ccdc40 protein_coding processed_transcript MGP_CBAJ_T0033542.1 MGP_CBAJ_G0019196.1 mouse_genomes_project 11 132303660 132343877 + MGP_CBAJ_P0033542 Ccdc40 protein_coding protein_coding MGP_CBAJ_T0033543.1 MGP_CBAJ_G0019196.1 mouse_genomes_project 11 132303665 132345424 + MGP_CBAJ_P0033543 Ccdc40 protein_coding protein_coding MGP_CBAJ_T0033544.1 MGP_CBAJ_G0019196.1 mouse_genomes_project 11 132316279 132332805 + Ccdc40 protein_coding retained_intron MGP_CBAJ_T0033545.1 MGP_CBAJ_G0019196.1 mouse_genomes_project 11 132334537 132345346 + Ccdc40 protein_coding retained_intron MGP_CBAJ_T0033546.1 MGP_CBAJ_G0019196.1 mouse_genomes_project 11 132339905 132346145 + Ccdc40 protein_coding processed_transcript MGP_CBAJ_T0033547.1 MGP_CBAJ_G0019196.1 mouse_genomes_project 11 132340745 132344097 + Ccdc40 protein_coding retained_intron MGP_CBAJ_T0033548.1 MGP_CBAJ_G0019196.1 mouse_genomes_project 11 132343848 132345216 + Ccdc40 protein_coding retained_intron MGP_CBAJ_T0012515.1 MGP_CBAJ_G0010627.1 mouse_genomes_project 11 80748065 80748987 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0033358.1 MGP_CBAJ_G0019156.1 mouse_genomes_project 11 129429535 129435952 + MGP_CBAJ_P0033358 1810032O08Rik protein_coding unknown_likely_coding MGP_CBAJ_T0033359.1 MGP_CBAJ_G0019156.1 mouse_genomes_project 11 129429568 129435942 + MGP_CBAJ_P0033359 1810032O08Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0033360.1 MGP_CBAJ_G0019156.1 mouse_genomes_project 11 129429595 129430522 + 1810032O08Rik protein_coding retained_intron MGP_CBAJ_T0033361.1 MGP_CBAJ_G0019156.1 mouse_genomes_project 11 129429607 129432488 + MGP_CBAJ_P0033361 1810032O08Rik protein_coding protein_coding MGP_CBAJ_T0033362.1 MGP_CBAJ_G0019156.1 mouse_genomes_project 11 129429780 129431874 + MGP_CBAJ_P0033362 1810032O08Rik protein_coding protein_coding MGP_CBAJ_T0033363.1 MGP_CBAJ_G0019156.1 mouse_genomes_project 11 129430591 129435946 + MGP_CBAJ_P0033363 1810032O08Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0027644.1 MGP_CBAJ_G0017747.1 mouse_genomes_project 11 3852613 3861467 - MGP_CBAJ_P0027644 Ddx56 protein_coding protein_coding MGP_CBAJ_T0027645.1 MGP_CBAJ_G0017747.1 mouse_genomes_project 11 3859001 3860087 - Ddx56 protein_coding retained_intron MGP_CBAJ_T0027646.1 MGP_CBAJ_G0017747.1 mouse_genomes_project 11 3859331 3861467 - MGP_CBAJ_P0027646 Ddx56 protein_coding protein_coding MGP_CBAJ_T0027647.1 MGP_CBAJ_G0017747.1 mouse_genomes_project 11 3860740 3861441 - Ddx56 protein_coding retained_intron MGP_CBAJ_T0030599.1 MGP_CBAJ_G0018486.1 mouse_genomes_project 11 85096133 85169214 + MGP_CBAJ_P0030599 Fam222b protein_coding protein_coding MGP_CBAJ_T0030600.1 MGP_CBAJ_G0018486.1 mouse_genomes_project 11 85096181 85168589 + MGP_CBAJ_P0030600 Fam222b protein_coding protein_coding MGP_CBAJ_T0030601.1 MGP_CBAJ_G0018486.1 mouse_genomes_project 11 85125993 85169214 + MGP_CBAJ_P0030601 Fam222b protein_coding protein_coding MGP_CBAJ_T0012450.1 MGP_CBAJ_G0010562.1 mouse_genomes_project 11 57057060 57057636 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012500.1 MGP_CBAJ_G0010612.1 mouse_genomes_project 11 76037468 76037842 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0033535.1 MGP_CBAJ_G0019194.1 mouse_genomes_project 11 132139093 132147780 - MGP_CBAJ_P0033535 Cbx4 protein_coding protein_coding MGP_CBAJ_T0033536.1 MGP_CBAJ_G0019194.1 mouse_genomes_project 11 132142926 132147780 - Cbx4 protein_coding processed_transcript MGP_CBAJ_T0030109.1 MGP_CBAJ_G0018357.1 mouse_genomes_project 11 78347360 78349829 + MGP_CBAJ_P0030109 Txndc17 protein_coding protein_coding MGP_CBAJ_T0030110.1 MGP_CBAJ_G0018357.1 mouse_genomes_project 11 78347428 78348491 + Txndc17 protein_coding retained_intron MGP_CBAJ_T0006097.1 MGP_CBAJ_G0005085.1 mouse_genomes_project 11 22071430 22082141 - Gm26829 lincRNA lincRNA MGP_CBAJ_T0016989.1 MGP_CBAJ_G0014939.1 mouse_genomes_project 11 106690921 106696587 - Gm11532 processed_transcript processed_transcript MGP_CBAJ_T0031251.1 MGP_CBAJ_G0018652.1 mouse_genomes_project 11 97427796 97463906 - MGP_CBAJ_P0031251 Scpep1 protein_coding protein_coding MGP_CBAJ_T0030827.1 MGP_CBAJ_G0018540.1 mouse_genomes_project 11 87833383 88174555 - MGP_CBAJ_P0030827 Myo1d protein_coding protein_coding MGP_CBAJ_T0030828.1 MGP_CBAJ_G0018540.1 mouse_genomes_project 11 87943484 88174555 - MGP_CBAJ_P0030828 Myo1d protein_coding protein_coding MGP_CBAJ_T0030829.1 MGP_CBAJ_G0018540.1 mouse_genomes_project 11 88047119 88174533 - Myo1d protein_coding retained_intron MGP_CBAJ_T0009621.1 MGP_CBAJ_G0007759.1 mouse_genomes_project 11 107563702 107563841 + Mir8102 miRNA miRNA MGP_CBAJ_T0012492.1 MGP_CBAJ_G0010604.1 mouse_genomes_project 11 71850892 71851871 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0028942.1 MGP_CBAJ_G0018091.1 mouse_genomes_project 11 62897211 62905024 - MGP_CBAJ_P0028942 2210407C18Rik protein_coding protein_coding MGP_CBAJ_T0028943.1 MGP_CBAJ_G0018091.1 mouse_genomes_project 11 62897216 62902451 - MGP_CBAJ_P0028943 2210407C18Rik protein_coding protein_coding MGP_CBAJ_T0028944.1 MGP_CBAJ_G0018091.1 mouse_genomes_project 11 62901256 62902444 - 2210407C18Rik protein_coding processed_transcript MGP_CBAJ_T0029720.1 MGP_CBAJ_G0018278.1 mouse_genomes_project 11 75597487 75599566 - MGP_CBAJ_P0029720 Slc35g3 protein_coding protein_coding MGP_CBAJ_T0030321.1 MGP_CBAJ_G0018428.1 mouse_genomes_project 11 81719561 81722455 - MGP_CBAJ_P0030321 Ovca2 protein_coding protein_coding MGP_CBAJ_T0030324.1 MGP_CBAJ_G0018428.1 mouse_genomes_project 11 81721420 81722407 - Ovca2 protein_coding processed_transcript MGP_CBAJ_T0031717.1 MGP_CBAJ_G0018770.1 mouse_genomes_project 11 107708640 107710372 - Fbxo47 protein_coding retained_intron MGP_CBAJ_T0031718.1 MGP_CBAJ_G0018770.1 mouse_genomes_project 11 107708640 107746057 - MGP_CBAJ_P0031718 Fbxo47 protein_coding protein_coding MGP_CBAJ_T0031719.1 MGP_CBAJ_G0018770.1 mouse_genomes_project 11 107709190 107746255 - MGP_CBAJ_P0031719 Fbxo47 protein_coding unknown_likely_coding MGP_CBAJ_T0006179.1 MGP_CBAJ_G0005156.1 mouse_genomes_project 11 77583291 77644996 + 9230020A06Rik lincRNA lincRNA MGP_CBAJ_T0006180.1 MGP_CBAJ_G0005156.1 mouse_genomes_project 11 77616876 77644289 + 9230020A06Rik lincRNA lincRNA MGP_CBAJ_T0003224.1 MGP_CBAJ_G0002977.1 mouse_genomes_project 11 111120602 111130671 + Dhx58os antisense antisense MGP_CBAJ_T0030284.1 MGP_CBAJ_G0018421.1 mouse_genomes_project 11 81272569 81326269 + MGP_CBAJ_P0030284 Mettl16 protein_coding protein_coding MGP_CBAJ_T0030285.1 MGP_CBAJ_G0018421.1 mouse_genomes_project 11 81272569 81336882 + MGP_CBAJ_P0030285 Mettl16 protein_coding protein_coding MGP_CBAJ_T0030286.1 MGP_CBAJ_G0018421.1 mouse_genomes_project 11 81272655 81275361 + MGP_CBAJ_P0030286 Mettl16 protein_coding protein_coding MGP_CBAJ_T0030287.1 MGP_CBAJ_G0018421.1 mouse_genomes_project 11 81272664 81326269 + MGP_CBAJ_P0030287 Mettl16 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030288.1 MGP_CBAJ_G0018421.1 mouse_genomes_project 11 81308864 81325321 + Mettl16 protein_coding retained_intron MGP_CBAJ_T0030289.1 MGP_CBAJ_G0018421.1 mouse_genomes_project 11 81314111 81325886 + Mettl16 protein_coding processed_transcript MGP_CBAJ_T0032035.1 MGP_CBAJ_G0018884.1 mouse_genomes_project 11 111128040 111137422 - MGP_CBAJ_P0032035 Dhx58 protein_coding protein_coding MGP_CBAJ_T0032036.1 MGP_CBAJ_G0018884.1 mouse_genomes_project 11 111128219 111129777 - Dhx58 protein_coding processed_transcript MGP_CBAJ_T0032037.1 MGP_CBAJ_G0018884.1 mouse_genomes_project 11 111128409 111132386 - Dhx58 protein_coding processed_transcript MGP_CBAJ_T0032038.1 MGP_CBAJ_G0018884.1 mouse_genomes_project 11 111134542 111137404 - Dhx58 protein_coding processed_transcript MGP_CBAJ_T0032039.1 MGP_CBAJ_G0018884.1 mouse_genomes_project 11 111135298 111136498 - Dhx58 protein_coding processed_transcript MGP_CBAJ_T0032040.1 MGP_CBAJ_G0018884.1 mouse_genomes_project 11 111135910 111137422 - Dhx58 protein_coding processed_transcript MGP_CBAJ_T0016892.1 MGP_CBAJ_G0014889.1 mouse_genomes_project 11 774771 783770 - Tug1 processed_transcript antisense MGP_CBAJ_T0016893.1 MGP_CBAJ_G0014889.1 mouse_genomes_project 11 774780 783770 - Tug1 processed_transcript antisense MGP_CBAJ_T0016894.1 MGP_CBAJ_G0014889.1 mouse_genomes_project 11 774780 785052 - Tug1 processed_transcript antisense MGP_CBAJ_T0016895.1 MGP_CBAJ_G0014889.1 mouse_genomes_project 11 783093 785282 - Tug1 processed_transcript antisense MGP_CBAJ_T0016896.1 MGP_CBAJ_G0014889.1 mouse_genomes_project 11 784301 785913 - Tug1 processed_transcript TEC MGP_CBAJ_T0031901.1 MGP_CBAJ_G0018818.1 mouse_genomes_project 11 109606043 109612623 - MGP_CBAJ_P0031901 Krt12 protein_coding protein_coding MGP_CBAJ_T0031264.1 MGP_CBAJ_G0018658.1 mouse_genomes_project 11 97868665 97870360 - MGP_CBAJ_P0031264 Nog protein_coding protein_coding MGP_CBAJ_T0097903.1 MGP_CBAJ_G0036176.1 mouse_genomes_project 11 53859773 53859886 + Gm23392 rRNA rRNA MGP_CBAJ_T0012336.1 MGP_CBAJ_G0010448.1 mouse_genomes_project 11 10427060 10429979 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099913.1 MGP_CBAJ_G0038168.1 mouse_genomes_project 11 27061157 27061276 - Gm24850 snoRNA snoRNA MGP_CBAJ_T0000816.1 MGP_CBAJ_G0000752.1 mouse_genomes_project 11 105495984 105496809 - TEC TEC MGP_CBAJ_T0003044.1 MGP_CBAJ_G0002832.1 mouse_genomes_project 11 2946552 2955490 + Gm11963 antisense antisense MGP_CBAJ_T0098715.1 MGP_CBAJ_G0036970.1 mouse_genomes_project 11 95579082 95579246 + Gm22068 snRNA snRNA MGP_CBAJ_T0009571.1 MGP_CBAJ_G0007709.1 mouse_genomes_project 11 70203931 70204030 - Gm25991 miRNA miRNA MGP_CBAJ_T0003253.1 MGP_CBAJ_G0003004.1 mouse_genomes_project 11 118915599 118917593 + Gm11712 antisense antisense MGP_CBAJ_T0031669.1 MGP_CBAJ_G0018760.1 mouse_genomes_project 11 107420610 107422927 - MGP_CBAJ_P0031669 E130012A19Rik protein_coding protein_coding MGP_CBAJ_T0006219.1 MGP_CBAJ_G0005183.1 mouse_genomes_project 11 97172476 97176439 + C030037D09Rik lincRNA lincRNA MGP_CBAJ_T0006220.1 MGP_CBAJ_G0005183.1 mouse_genomes_project 11 97172635 97185167 + C030037D09Rik lincRNA lincRNA MGP_CBAJ_T0006221.1 MGP_CBAJ_G0005183.1 mouse_genomes_project 11 97174320 97178012 + C030037D09Rik lincRNA lincRNA MGP_CBAJ_T0101551.1 MGP_CBAJ_G0039583.1 mouse_genomes_project 11 90947998 90953157 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0032594.1 MGP_CBAJ_G0018997.1 mouse_genomes_project 11 115643928 115693266 + MGP_CBAJ_P0032594 Myl4 protein_coding protein_coding MGP_CBAJ_T0032595.1 MGP_CBAJ_G0018997.1 mouse_genomes_project 11 115676389 115691799 + MGP_CBAJ_P0032595 Myl4 protein_coding protein_coding MGP_CBAJ_T0032596.1 MGP_CBAJ_G0018997.1 mouse_genomes_project 11 115682987 115693266 + MGP_CBAJ_P0032596 Myl4 protein_coding protein_coding MGP_CBAJ_T0032597.1 MGP_CBAJ_G0018997.1 mouse_genomes_project 11 115683019 115691065 + MGP_CBAJ_P0032597 Myl4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032598.1 MGP_CBAJ_G0018997.1 mouse_genomes_project 11 115683327 115693266 + MGP_CBAJ_P0032598 Myl4 protein_coding protein_coding MGP_CBAJ_T0032599.1 MGP_CBAJ_G0018997.1 mouse_genomes_project 11 115686371 115693260 + Myl4 protein_coding retained_intron MGP_CBAJ_T0032600.1 MGP_CBAJ_G0018997.1 mouse_genomes_project 11 115688085 115692398 + Myl4 protein_coding retained_intron MGP_CBAJ_T0032601.1 MGP_CBAJ_G0018997.1 mouse_genomes_project 11 115691014 115701805 + MGP_CBAJ_P0032601 Myl4 protein_coding protein_coding MGP_CBAJ_T0030993.1 MGP_CBAJ_G0018595.1 mouse_genomes_project 11 92329713 92336946 - MGP_CBAJ_P0030993 Lhx1 protein_coding protein_coding MGP_CBAJ_T0030994.1 MGP_CBAJ_G0018595.1 mouse_genomes_project 11 92330863 92333742 - MGP_CBAJ_P0030994 Lhx1 protein_coding protein_coding MGP_CBAJ_T0030995.1 MGP_CBAJ_G0018595.1 mouse_genomes_project 11 92331128 92333478 - Lhx1 protein_coding retained_intron MGP_CBAJ_T0030996.1 MGP_CBAJ_G0018595.1 mouse_genomes_project 11 92333306 92334123 - MGP_CBAJ_P0030996 Lhx1 protein_coding protein_coding MGP_CBAJ_T0031455.1 MGP_CBAJ_G0018704.1 mouse_genomes_project 11 104493002 104498814 - MGP_CBAJ_P0031455 Dlx4 protein_coding protein_coding MGP_CBAJ_T0031456.1 MGP_CBAJ_G0018704.1 mouse_genomes_project 11 104496177 104498352 - Dlx4 protein_coding processed_transcript MGP_CBAJ_T0003153.1 MGP_CBAJ_G0002923.1 mouse_genomes_project 11 76599289 76601289 - antisense antisense MGP_CBAJ_T0099925.1 MGP_CBAJ_G0038180.1 mouse_genomes_project 11 60472719 60472815 + Gm22603 snoRNA snoRNA MGP_CBAJ_T0028575.1 MGP_CBAJ_G0017983.1 mouse_genomes_project 11 53981110 53992683 - MGP_CBAJ_P0028575 Zfp354b protein_coding protein_coding MGP_CBAJ_T0028576.1 MGP_CBAJ_G0017983.1 mouse_genomes_project 11 53989625 53991699 - Zfp354b protein_coding processed_transcript MGP_CBAJ_T0028925.1 MGP_CBAJ_G0018078.1 mouse_genomes_project 11 62633530 62645281 + MGP_CBAJ_P0028925 Lypd8 protein_coding protein_coding MGP_CBAJ_T0028926.1 MGP_CBAJ_G0018078.1 mouse_genomes_project 11 62633530 62645090 + MGP_CBAJ_P0028926 Lypd8 protein_coding protein_coding MGP_CBAJ_T0098728.1 MGP_CBAJ_G0036983.1 mouse_genomes_project 11 111960406 111960586 - Gm25475 snRNA snRNA MGP_CBAJ_T0028042.1 MGP_CBAJ_G0017838.1 mouse_genomes_project 11 29846794 29879549 + MGP_CBAJ_P0028042 Clhc1 protein_coding protein_coding MGP_CBAJ_T0028043.1 MGP_CBAJ_G0017838.1 mouse_genomes_project 11 29862656 29879528 + Clhc1 protein_coding processed_transcript MGP_CBAJ_T0028044.1 MGP_CBAJ_G0017838.1 mouse_genomes_project 11 29862673 29879386 + Clhc1 protein_coding processed_transcript MGP_CBAJ_T0033072.1 MGP_CBAJ_G0019107.1 mouse_genomes_project 11 127936894 127950160 + MGP_CBAJ_P0033072 Kctd2 protein_coding protein_coding MGP_CBAJ_T0033073.1 MGP_CBAJ_G0019107.1 mouse_genomes_project 11 127937251 127948371 + MGP_CBAJ_P0033073 Kctd2 protein_coding protein_coding MGP_CBAJ_T0033074.1 MGP_CBAJ_G0019107.1 mouse_genomes_project 11 127937283 127947138 + MGP_CBAJ_P0033074 Kctd2 protein_coding protein_coding MGP_CBAJ_T0033075.1 MGP_CBAJ_G0019107.1 mouse_genomes_project 11 127937413 127939527 + Kctd2 protein_coding retained_intron MGP_CBAJ_T0033076.1 MGP_CBAJ_G0019107.1 mouse_genomes_project 11 127946449 127947298 + Kctd2 protein_coding processed_transcript MGP_CBAJ_T0012475.1 MGP_CBAJ_G0010587.1 mouse_genomes_project 11 64965226 64965668 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099954.1 MGP_CBAJ_G0038209.1 mouse_genomes_project 11 107619621 107619716 - Gm27326 snoRNA snoRNA MGP_CBAJ_T0009614.1 MGP_CBAJ_G0007752.1 mouse_genomes_project 11 105816378 105816480 + Mir196a-1 miRNA miRNA MGP_CBAJ_T0012463.1 MGP_CBAJ_G0010575.1 mouse_genomes_project 11 59468561 59469031 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009612.1 MGP_CBAJ_G0007750.1 mouse_genomes_project 11 100908884 100908953 - Gm22702 miRNA miRNA MGP_CBAJ_T0028951.1 MGP_CBAJ_G0018097.1 mouse_genomes_project 11 63041024 63045135 + MGP_CBAJ_P0028951 protein_coding protein_coding MGP_CBAJ_T0031941.1 MGP_CBAJ_G0018856.1 mouse_genomes_project 11 110376354 110381557 - MGP_CBAJ_P0031941 Krt34 protein_coding protein_coding MGP_CBAJ_T0012520.1 MGP_CBAJ_G0010632.1 mouse_genomes_project 11 83933916 83934220 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0028073.1 MGP_CBAJ_G0017844.1 mouse_genomes_project 11 31273496 31398102 + MGP_CBAJ_P0028073 Psme4 protein_coding protein_coding MGP_CBAJ_T0028074.1 MGP_CBAJ_G0017844.1 mouse_genomes_project 11 31274092 31312738 + MGP_CBAJ_P0028074 Psme4 protein_coding protein_coding MGP_CBAJ_T0028075.1 MGP_CBAJ_G0017844.1 mouse_genomes_project 11 31319948 31324779 + Psme4 protein_coding processed_transcript MGP_CBAJ_T0028076.1 MGP_CBAJ_G0017844.1 mouse_genomes_project 11 31338007 31398900 + MGP_CBAJ_P0028076 Psme4 protein_coding unknown_likely_coding MGP_CBAJ_T0028077.1 MGP_CBAJ_G0017844.1 mouse_genomes_project 11 31341160 31345213 + Psme4 protein_coding processed_transcript MGP_CBAJ_T0028078.1 MGP_CBAJ_G0017844.1 mouse_genomes_project 11 31343439 31344108 + Psme4 protein_coding processed_transcript MGP_CBAJ_T0028079.1 MGP_CBAJ_G0017844.1 mouse_genomes_project 11 31370258 31374631 + MGP_CBAJ_P0028079 Psme4 protein_coding protein_coding MGP_CBAJ_T0028080.1 MGP_CBAJ_G0017844.1 mouse_genomes_project 11 31383015 31391882 + Psme4 protein_coding processed_transcript MGP_CBAJ_T0029596.1 MGP_CBAJ_G0018250.1 mouse_genomes_project 11 74920146 74934069 - MGP_CBAJ_P0029596 Alox8 protein_coding protein_coding MGP_CBAJ_T0029597.1 MGP_CBAJ_G0018250.1 mouse_genomes_project 11 74921304 74934035 - MGP_CBAJ_P0029597 Alox8 protein_coding protein_coding MGP_CBAJ_T0029598.1 MGP_CBAJ_G0018250.1 mouse_genomes_project 11 74926101 74934037 - Alox8 protein_coding retained_intron MGP_CBAJ_T0029599.1 MGP_CBAJ_G0018250.1 mouse_genomes_project 11 74927766 74933610 - Alox8 protein_coding retained_intron MGP_CBAJ_T0030184.1 MGP_CBAJ_G0018376.1 mouse_genomes_project 11 79360792 79408264 + MGP_CBAJ_P0030184 Itgae protein_coding protein_coding MGP_CBAJ_T0030185.1 MGP_CBAJ_G0018376.1 mouse_genomes_project 11 79360792 79423117 + MGP_CBAJ_P0030185 Itgae protein_coding protein_coding MGP_CBAJ_T0003148.1 MGP_CBAJ_G0002920.1 mouse_genomes_project 11 75166308 75167497 + Kdm6bos antisense antisense MGP_CBAJ_T0003249.1 MGP_CBAJ_G0003001.1 mouse_genomes_project 11 118497200 118499521 + antisense antisense MGP_CBAJ_T0003250.1 MGP_CBAJ_G0003001.1 mouse_genomes_project 11 118497305 118499526 + antisense antisense MGP_CBAJ_T0098732.1 MGP_CBAJ_G0036987.1 mouse_genomes_project 11 117516742 117516886 - Gm25556 snRNA snRNA MGP_CBAJ_T0003254.1 MGP_CBAJ_G0003005.1 mouse_genomes_project 11 118941548 118944707 + Gm11713 antisense antisense MGP_CBAJ_T0009591.1 MGP_CBAJ_G0007729.1 mouse_genomes_project 11 81382386 81382454 - Mir6926 miRNA miRNA MGP_CBAJ_T0032801.1 MGP_CBAJ_G0019044.1 mouse_genomes_project 11 119472260 119509364 - MGP_CBAJ_P0032801 Cacng5 protein_coding protein_coding MGP_CBAJ_T0032802.1 MGP_CBAJ_G0019044.1 mouse_genomes_project 11 119472326 119516106 - MGP_CBAJ_P0032802 Cacng5 protein_coding protein_coding MGP_CBAJ_T0006098.1 MGP_CBAJ_G0005086.1 mouse_genomes_project 11 22088638 22089718 + Gm12052 lincRNA lincRNA MGP_CBAJ_T0029470.1 MGP_CBAJ_G0018224.1 mouse_genomes_project 11 73445979 73471400 - Cfap52 protein_coding processed_transcript MGP_CBAJ_T0029471.1 MGP_CBAJ_G0018224.1 mouse_genomes_project 11 73445981 73494941 - MGP_CBAJ_P0029471 Cfap52 protein_coding protein_coding MGP_CBAJ_T0029472.1 MGP_CBAJ_G0018224.1 mouse_genomes_project 11 73446126 73456765 - Cfap52 protein_coding processed_transcript MGP_CBAJ_T0029473.1 MGP_CBAJ_G0018224.1 mouse_genomes_project 11 73464761 73494950 - MGP_CBAJ_P0029473 Cfap52 protein_coding protein_coding MGP_CBAJ_T0006210.1 MGP_CBAJ_G0005176.1 mouse_genomes_project 11 92546382 92549812 - 1700109G15Rik lincRNA lincRNA MGP_CBAJ_T0032968.1 MGP_CBAJ_G0019080.1 mouse_genomes_project 11 127152420 127178979 + Kif19a protein_coding processed_transcript MGP_CBAJ_T0032969.1 MGP_CBAJ_G0019080.1 mouse_genomes_project 11 127152420 127178979 + Kif19a protein_coding processed_transcript MGP_CBAJ_T0032970.1 MGP_CBAJ_G0019080.1 mouse_genomes_project 11 127152420 127180939 + MGP_CBAJ_P0032970 Kif19a protein_coding protein_coding MGP_CBAJ_T0032971.1 MGP_CBAJ_G0019080.1 mouse_genomes_project 11 127152421 127183381 + MGP_CBAJ_P0032971 Kif19a protein_coding protein_coding MGP_CBAJ_T0032972.1 MGP_CBAJ_G0019080.1 mouse_genomes_project 11 127177458 127178367 + Kif19a protein_coding retained_intron MGP_CBAJ_T0032973.1 MGP_CBAJ_G0019080.1 mouse_genomes_project 11 127180706 127183543 + MGP_CBAJ_P0032973 Kif19a protein_coding protein_coding MGP_CBAJ_T0032974.1 MGP_CBAJ_G0019080.1 mouse_genomes_project 11 127180748 127182138 + Kif19a protein_coding retained_intron MGP_CBAJ_T0012359.1 MGP_CBAJ_G0010471.1 mouse_genomes_project 11 18755407 18756239 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0028191.1 MGP_CBAJ_G0017876.1 mouse_genomes_project 11 34985940 34996546 + MGP_CBAJ_P0028191 Kcnmb1 protein_coding protein_coding MGP_CBAJ_T0009603.1 MGP_CBAJ_G0007741.1 mouse_genomes_project 11 86952160 86952272 + Mir365-2 miRNA miRNA MGP_CBAJ_T0012506.1 MGP_CBAJ_G0010618.1 mouse_genomes_project 11 77127396 77128200 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0028395.1 MGP_CBAJ_G0017932.1 mouse_genomes_project 11 51574468 51587550 + MGP_CBAJ_P0028395 protein_coding protein_coding MGP_CBAJ_T0028396.1 MGP_CBAJ_G0017932.1 mouse_genomes_project 11 51574474 51578423 + MGP_CBAJ_P0028396 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028397.1 MGP_CBAJ_G0017932.1 mouse_genomes_project 11 51575517 51582542 + MGP_CBAJ_P0028397 protein_coding protein_coding MGP_CBAJ_T0028398.1 MGP_CBAJ_G0017932.1 mouse_genomes_project 11 51575807 51582599 + MGP_CBAJ_P0028398 protein_coding protein_coding MGP_CBAJ_T0028399.1 MGP_CBAJ_G0017932.1 mouse_genomes_project 11 51575840 51588176 + MGP_CBAJ_P0028399 protein_coding protein_coding MGP_CBAJ_T0028400.1 MGP_CBAJ_G0017932.1 mouse_genomes_project 11 51584896 51589198 + protein_coding retained_intron MGP_CBAJ_T0030647.1 MGP_CBAJ_G0018496.1 mouse_genomes_project 11 85335391 85338296 + MGP_CBAJ_P0030647 BC030499 protein_coding protein_coding MGP_CBAJ_T0030648.1 MGP_CBAJ_G0018496.1 mouse_genomes_project 11 85335442 85339893 + BC030499 protein_coding retained_intron MGP_CBAJ_T0030649.1 MGP_CBAJ_G0018496.1 mouse_genomes_project 11 85335444 85338369 + BC030499 protein_coding retained_intron MGP_CBAJ_T0030650.1 MGP_CBAJ_G0018496.1 mouse_genomes_project 11 85335479 85338384 + BC030499 protein_coding retained_intron MGP_CBAJ_T0030651.1 MGP_CBAJ_G0018496.1 mouse_genomes_project 11 85336106 85336714 + BC030499 protein_coding retained_intron MGP_CBAJ_T0030652.1 MGP_CBAJ_G0018496.1 mouse_genomes_project 11 85338357 85341356 + BC030499 protein_coding retained_intron MGP_CBAJ_T0031306.1 MGP_CBAJ_G0018670.1 mouse_genomes_project 11 102988777 103015990 - Utp18 protein_coding processed_transcript MGP_CBAJ_T0031307.1 MGP_CBAJ_G0018670.1 mouse_genomes_project 11 102988777 103015990 - MGP_CBAJ_P0031307 Utp18 protein_coding protein_coding MGP_CBAJ_T0031308.1 MGP_CBAJ_G0018670.1 mouse_genomes_project 11 103004897 103005661 - Utp18 protein_coding processed_transcript MGP_CBAJ_T0030718.1 MGP_CBAJ_G0018516.1 mouse_genomes_project 11 86032830 86072186 + MGP_CBAJ_P0030718 Nos2 protein_coding protein_coding MGP_CBAJ_T0030719.1 MGP_CBAJ_G0018516.1 mouse_genomes_project 11 86037241 86071684 + MGP_CBAJ_P0030719 Nos2 protein_coding unknown_likely_coding MGP_CBAJ_T0003212.1 MGP_CBAJ_G0002970.1 mouse_genomes_project 11 108381182 108382192 + Gm12352 antisense antisense MGP_CBAJ_T0003079.1 MGP_CBAJ_G0002862.1 mouse_genomes_project 11 48784773 48787531 + Gm12167 antisense antisense MGP_CBAJ_T0009639.1 MGP_CBAJ_G0007777.1 mouse_genomes_project 11 118222263 118222364 - Gm25994 miRNA miRNA MGP_CBAJ_T0029734.1 MGP_CBAJ_G0018282.1 mouse_genomes_project 11 75649131 75651153 - MGP_CBAJ_P0029734 Tmem102 protein_coding protein_coding MGP_CBAJ_T0029736.1 MGP_CBAJ_G0018284.1 mouse_genomes_project 11 75666902 75668207 - MGP_CBAJ_P0029736 Spem1 protein_coding protein_coding MGP_CBAJ_T0028506.1 MGP_CBAJ_G0017969.1 mouse_genomes_project 11 53188463 53199860 - MGP_CBAJ_P0028506 Sqstm1 protein_coding protein_coding MGP_CBAJ_T0028507.1 MGP_CBAJ_G0017969.1 mouse_genomes_project 11 53189249 53199896 - MGP_CBAJ_P0028507 Sqstm1 protein_coding protein_coding MGP_CBAJ_T0028508.1 MGP_CBAJ_G0017969.1 mouse_genomes_project 11 53189264 53192052 - MGP_CBAJ_P0028508 Sqstm1 protein_coding protein_coding MGP_CBAJ_T0028509.1 MGP_CBAJ_G0017969.1 mouse_genomes_project 11 53189708 53199834 - MGP_CBAJ_P0028509 Sqstm1 protein_coding protein_coding MGP_CBAJ_T0028510.1 MGP_CBAJ_G0017969.1 mouse_genomes_project 11 53191409 53195169 - Sqstm1 protein_coding retained_intron MGP_CBAJ_T0028511.1 MGP_CBAJ_G0017969.1 mouse_genomes_project 11 53191540 53192216 - Sqstm1 protein_coding retained_intron MGP_CBAJ_T0028512.1 MGP_CBAJ_G0017969.1 mouse_genomes_project 11 53194747 53196388 - Sqstm1 protein_coding retained_intron MGP_CBAJ_T0032747.1 MGP_CBAJ_G0019033.1 mouse_genomes_project 11 118219230 118227606 - MGP_CBAJ_P0032747 Ddx5 protein_coding protein_coding MGP_CBAJ_T0032748.1 MGP_CBAJ_G0019033.1 mouse_genomes_project 11 118220423 118227568 - MGP_CBAJ_P0032748 Ddx5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032749.1 MGP_CBAJ_G0019033.1 mouse_genomes_project 11 118222404 118227541 - Ddx5 protein_coding processed_transcript MGP_CBAJ_T0032750.1 MGP_CBAJ_G0019033.1 mouse_genomes_project 11 118222833 118224147 - Ddx5 protein_coding retained_intron MGP_CBAJ_T0032751.1 MGP_CBAJ_G0019033.1 mouse_genomes_project 11 118224243 118225151 - Ddx5 protein_coding processed_transcript MGP_CBAJ_T0032752.1 MGP_CBAJ_G0019033.1 mouse_genomes_project 11 118224596 118228259 - MGP_CBAJ_P0032752 Ddx5 protein_coding protein_coding MGP_CBAJ_T0032753.1 MGP_CBAJ_G0019033.1 mouse_genomes_project 11 118225171 118227957 - MGP_CBAJ_P0032753 Ddx5 protein_coding protein_coding MGP_CBAJ_T0016915.1 MGP_CBAJ_G0014898.1 mouse_genomes_project 11 22606518 22615978 + Gm12059 processed_transcript processed_transcript MGP_CBAJ_T0031262.1 MGP_CBAJ_G0018657.1 mouse_genomes_project 11 97617254 97641656 + MGP_CBAJ_P0031262 Gm525 protein_coding protein_coding MGP_CBAJ_T0031263.1 MGP_CBAJ_G0018657.1 mouse_genomes_project 11 97618433 97641581 + MGP_CBAJ_P0031263 Gm525 protein_coding protein_coding MGP_CBAJ_T0030924.1 MGP_CBAJ_G0018574.1 mouse_genomes_project 11 91141008 91163248 - MGP_CBAJ_P0030924 Mmp28 protein_coding protein_coding MGP_CBAJ_T0030925.1 MGP_CBAJ_G0018574.1 mouse_genomes_project 11 91142114 91163187 - MGP_CBAJ_P0030925 Mmp28 protein_coding protein_coding MGP_CBAJ_T0030926.1 MGP_CBAJ_G0018574.1 mouse_genomes_project 11 91142114 91163297 - MGP_CBAJ_P0030926 Mmp28 protein_coding protein_coding MGP_CBAJ_T0030927.1 MGP_CBAJ_G0018574.1 mouse_genomes_project 11 91143302 91163218 - MGP_CBAJ_P0030927 Mmp28 protein_coding protein_coding MGP_CBAJ_T0030928.1 MGP_CBAJ_G0018574.1 mouse_genomes_project 11 91151600 91163297 - Mmp28 protein_coding processed_transcript MGP_CBAJ_T0003244.1 MGP_CBAJ_G0002996.1 mouse_genomes_project 11 117364481 117365183 - Gm11646 antisense antisense MGP_CBAJ_T0012603.1 MGP_CBAJ_G0010715.1 mouse_genomes_project 11 120891469 120892477 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031843.1 MGP_CBAJ_G0018800.1 mouse_genomes_project 11 108870422 108900326 + MGP_CBAJ_P0031843 Casc3 protein_coding protein_coding MGP_CBAJ_T0031844.1 MGP_CBAJ_G0018800.1 mouse_genomes_project 11 108870600 108900318 + MGP_CBAJ_P0031844 Casc3 protein_coding protein_coding MGP_CBAJ_T0031845.1 MGP_CBAJ_G0018800.1 mouse_genomes_project 11 108870942 108871721 + Casc3 protein_coding processed_transcript MGP_CBAJ_T0031846.1 MGP_CBAJ_G0018800.1 mouse_genomes_project 11 108870953 108888904 + Casc3 protein_coding processed_transcript MGP_CBAJ_T0029153.1 MGP_CBAJ_G0018155.1 mouse_genomes_project 11 65438940 65453336 - MGP_CBAJ_P0029153 Tmem11 protein_coding protein_coding MGP_CBAJ_T0029154.1 MGP_CBAJ_G0018155.1 mouse_genomes_project 11 65438940 65453570 - MGP_CBAJ_P0029154 Tmem11 protein_coding protein_coding MGP_CBAJ_T0029155.1 MGP_CBAJ_G0018155.1 mouse_genomes_project 11 65439474 65453085 - MGP_CBAJ_P0029155 Tmem11 protein_coding protein_coding MGP_CBAJ_T0028815.1 MGP_CBAJ_G0018045.1 mouse_genomes_project 11 58621644 58664900 - MGP_CBAJ_P0028815 Lyrm7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028816.1 MGP_CBAJ_G0018045.1 mouse_genomes_project 11 58638157 58664592 - MGP_CBAJ_P0028816 Lyrm7 protein_coding protein_coding MGP_CBAJ_T0028817.1 MGP_CBAJ_G0018045.1 mouse_genomes_project 11 58638158 58664572 - MGP_CBAJ_P0028817 Lyrm7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028818.1 MGP_CBAJ_G0018045.1 mouse_genomes_project 11 58639437 58651144 - Lyrm7 protein_coding retained_intron MGP_CBAJ_T0028819.1 MGP_CBAJ_G0018045.1 mouse_genomes_project 11 58639477 58664593 - Lyrm7 protein_coding processed_transcript MGP_CBAJ_T0028820.1 MGP_CBAJ_G0018045.1 mouse_genomes_project 11 58650831 58664569 - Lyrm7 protein_coding retained_intron MGP_CBAJ_T0028621.1 MGP_CBAJ_G0017996.1 mouse_genomes_project 11 54867196 54873111 + MGP_CBAJ_P0028621 Nhp2 protein_coding protein_coding MGP_CBAJ_T0028622.1 MGP_CBAJ_G0017996.1 mouse_genomes_project 11 54867232 54872826 + Nhp2 protein_coding retained_intron MGP_CBAJ_T0006201.1 MGP_CBAJ_G0005171.1 mouse_genomes_project 11 89483909 89487273 + Gm11419 lincRNA lincRNA MGP_CBAJ_T0032409.1 MGP_CBAJ_G0018956.1 mouse_genomes_project 11 113189217 113199913 - MGP_CBAJ_P0032409 Fam171a2 protein_coding protein_coding MGP_CBAJ_T0032410.1 MGP_CBAJ_G0018956.1 mouse_genomes_project 11 113190984 113192014 - Fam171a2 protein_coding processed_transcript MGP_CBAJ_T0032411.1 MGP_CBAJ_G0018956.1 mouse_genomes_project 11 113192469 113199825 - Fam171a2 protein_coding processed_transcript MGP_CBAJ_T0099962.1 MGP_CBAJ_G0038217.1 mouse_genomes_project 11 117874049 117874184 + Gm22711 snoRNA snoRNA MGP_CBAJ_T0030842.1 MGP_CBAJ_G0018549.1 mouse_genomes_project 11 89617216 89618772 + MGP_CBAJ_P0030842 Ccl12 protein_coding protein_coding MGP_CBAJ_T0030843.1 MGP_CBAJ_G0018549.1 mouse_genomes_project 11 89617223 89618739 + Ccl12 protein_coding processed_transcript MGP_CBAJ_T0032790.1 MGP_CBAJ_G0019041.1 mouse_genomes_project 11 119112775 119267858 + MGP_CBAJ_P0032790 Helz protein_coding unknown_likely_coding MGP_CBAJ_T0032791.1 MGP_CBAJ_G0019041.1 mouse_genomes_project 11 119114211 119148680 + Helz protein_coding processed_transcript MGP_CBAJ_T0032792.1 MGP_CBAJ_G0019041.1 mouse_genomes_project 11 119114211 119268082 + MGP_CBAJ_P0032792 Helz protein_coding protein_coding MGP_CBAJ_T0032793.1 MGP_CBAJ_G0019041.1 mouse_genomes_project 11 119114211 119248293 + MGP_CBAJ_P0032793 Helz protein_coding protein_coding MGP_CBAJ_T0032794.1 MGP_CBAJ_G0019041.1 mouse_genomes_project 11 119201734 119248293 + MGP_CBAJ_P0032794 Helz protein_coding protein_coding MGP_CBAJ_T0032795.1 MGP_CBAJ_G0019041.1 mouse_genomes_project 11 119210626 119222201 + Helz protein_coding processed_transcript MGP_CBAJ_T0032796.1 MGP_CBAJ_G0019041.1 mouse_genomes_project 11 119247057 119248992 + Helz protein_coding processed_transcript MGP_CBAJ_T0032797.1 MGP_CBAJ_G0019041.1 mouse_genomes_project 11 119248957 119267652 + Helz protein_coding processed_transcript MGP_CBAJ_T0006099.1 MGP_CBAJ_G0005087.1 mouse_genomes_project 11 22211159 22214306 - Gm12055 lincRNA lincRNA MGP_CBAJ_T0031475.1 MGP_CBAJ_G0018708.1 mouse_genomes_project 11 104758292 104761423 + MGP_CBAJ_P0031475 Slc35b1 protein_coding protein_coding MGP_CBAJ_T0031476.1 MGP_CBAJ_G0018708.1 mouse_genomes_project 11 104758426 104765296 + MGP_CBAJ_P0031476 Slc35b1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031477.1 MGP_CBAJ_G0018708.1 mouse_genomes_project 11 104758437 104765297 + MGP_CBAJ_P0031477 Slc35b1 protein_coding protein_coding MGP_CBAJ_T0031478.1 MGP_CBAJ_G0018708.1 mouse_genomes_project 11 104758441 104759844 + Slc35b1 protein_coding retained_intron MGP_CBAJ_T0031479.1 MGP_CBAJ_G0018708.1 mouse_genomes_project 11 104763518 104764187 + Slc35b1 protein_coding retained_intron MGP_CBAJ_T0032508.1 MGP_CBAJ_G0018976.1 mouse_genomes_project 11 114012765 114018331 + MGP_CBAJ_P0032508 Hexim1 protein_coding protein_coding MGP_CBAJ_T0012456.1 MGP_CBAJ_G0010568.1 mouse_genomes_project 11 57891799 57892930 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0030257.1 MGP_CBAJ_G0018411.1 mouse_genomes_project 11 80598044 80605017 + protein_coding processed_transcript MGP_CBAJ_T0012386.1 MGP_CBAJ_G0010498.1 mouse_genomes_project 11 27405008 27405405 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012346.1 MGP_CBAJ_G0010458.1 mouse_genomes_project 11 15292721 15296104 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003124.1 MGP_CBAJ_G0002901.1 mouse_genomes_project 11 67420424 67422405 + Lrrc75aos2 antisense antisense MGP_CBAJ_T0003125.1 MGP_CBAJ_G0002901.1 mouse_genomes_project 11 67420425 67421680 + Lrrc75aos2 antisense antisense MGP_CBAJ_T0098484.1 MGP_CBAJ_G0036743.1 mouse_genomes_project 11 108210759 108212751 + Gm20644 sense_overlapping sense_overlapping MGP_CBAJ_T0012517.1 MGP_CBAJ_G0010629.1 mouse_genomes_project 11 81594787 81597261 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0030681.1 MGP_CBAJ_G0018505.1 mouse_genomes_project 11 85563864 85594750 - MGP_CBAJ_P0030681 Sarm1 protein_coding protein_coding MGP_CBAJ_T0030682.1 MGP_CBAJ_G0018505.1 mouse_genomes_project 11 85564747 85575307 - Sarm1 protein_coding retained_intron MGP_CBAJ_T0030683.1 MGP_CBAJ_G0018505.1 mouse_genomes_project 11 85564825 85595046 - MGP_CBAJ_P0030683 Sarm1 protein_coding protein_coding MGP_CBAJ_T0030684.1 MGP_CBAJ_G0018505.1 mouse_genomes_project 11 85574342 85578808 - Sarm1 protein_coding retained_intron MGP_CBAJ_T0030685.1 MGP_CBAJ_G0018505.1 mouse_genomes_project 11 85582467 85594978 - Sarm1 protein_coding processed_transcript MGP_CBAJ_T0097915.1 MGP_CBAJ_G0036188.1 mouse_genomes_project 11 129014313 129014429 - n-R5s74 rRNA rRNA MGP_CBAJ_T0029643.1 MGP_CBAJ_G0018261.1 mouse_genomes_project 11 75190227 75334322 - MGP_CBAJ_P0029643 Dnah2 protein_coding protein_coding MGP_CBAJ_T0029644.1 MGP_CBAJ_G0018261.1 mouse_genomes_project 11 75190227 75338874 - MGP_CBAJ_P0029644 Dnah2 protein_coding protein_coding MGP_CBAJ_T0029645.1 MGP_CBAJ_G0018261.1 mouse_genomes_project 11 75190411 75336290 - MGP_CBAJ_P0029645 Dnah2 protein_coding unknown_likely_coding MGP_CBAJ_T0029646.1 MGP_CBAJ_G0018261.1 mouse_genomes_project 11 75245364 75246449 - Dnah2 protein_coding processed_transcript MGP_CBAJ_T0029647.1 MGP_CBAJ_G0018261.1 mouse_genomes_project 11 75300766 75338876 - Dnah2 protein_coding processed_transcript MGP_CBAJ_T0029648.1 MGP_CBAJ_G0018261.1 mouse_genomes_project 11 75306107 75306856 - Dnah2 protein_coding processed_transcript MGP_CBAJ_T0006137.1 MGP_CBAJ_G0005119.1 mouse_genomes_project 11 46464998 46471401 - lincRNA lincRNA MGP_CBAJ_T0029684.1 MGP_CBAJ_G0018271.1 mouse_genomes_project 11 75478059 75480000 - MGP_CBAJ_P0029684 Cd68 protein_coding protein_coding MGP_CBAJ_T0029685.1 MGP_CBAJ_G0018271.1 mouse_genomes_project 11 75478152 75479909 - Cd68 protein_coding processed_transcript MGP_CBAJ_T0029686.1 MGP_CBAJ_G0018271.1 mouse_genomes_project 11 75478217 75479909 - MGP_CBAJ_P0029686 Cd68 protein_coding protein_coding MGP_CBAJ_T0099928.1 MGP_CBAJ_G0038183.1 mouse_genomes_project 11 67417737 67417809 + Snord49b snoRNA snoRNA MGP_CBAJ_T0031245.1 MGP_CBAJ_G0018651.1 mouse_genomes_project 11 97303174 97329719 - MGP_CBAJ_P0031245 Akap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031246.1 MGP_CBAJ_G0018651.1 mouse_genomes_project 11 97303174 97329719 - MGP_CBAJ_P0031246 Akap1 protein_coding protein_coding MGP_CBAJ_T0031247.1 MGP_CBAJ_G0018651.1 mouse_genomes_project 11 97303174 97344907 - MGP_CBAJ_P0031247 Akap1 protein_coding protein_coding MGP_CBAJ_T0031248.1 MGP_CBAJ_G0018651.1 mouse_genomes_project 11 97304138 97344038 - MGP_CBAJ_P0031248 Akap1 protein_coding protein_coding MGP_CBAJ_T0031249.1 MGP_CBAJ_G0018651.1 mouse_genomes_project 11 97312558 97317086 - Akap1 protein_coding retained_intron MGP_CBAJ_T0031250.1 MGP_CBAJ_G0018651.1 mouse_genomes_project 11 97314513 97320077 - MGP_CBAJ_P0031250 Akap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028463.1 MGP_CBAJ_G0017957.1 mouse_genomes_project 11 52387628 52390966 + MGP_CBAJ_P0028463 Olfr1384 protein_coding protein_coding MGP_CBAJ_T0009654.1 MGP_CBAJ_G0007792.1 mouse_genomes_project 11 133284666 133284778 - Gm25948 miRNA miRNA MGP_CBAJ_T0028354.1 MGP_CBAJ_G0017920.1 mouse_genomes_project 11 48840971 48851575 + Fam71b protein_coding processed_transcript MGP_CBAJ_T0028355.1 MGP_CBAJ_G0017920.1 mouse_genomes_project 11 48849124 48852921 + MGP_CBAJ_P0028355 Fam71b protein_coding protein_coding MGP_CBAJ_T0099924.1 MGP_CBAJ_G0038179.1 mouse_genomes_project 11 60242980 60243046 - Gm24253 snoRNA snoRNA MGP_CBAJ_T0030757.1 MGP_CBAJ_G0018526.1 mouse_genomes_project 11 86797506 86917885 + MGP_CBAJ_P0030757 Rab11fip4 protein_coding protein_coding MGP_CBAJ_T0030758.1 MGP_CBAJ_G0018526.1 mouse_genomes_project 11 86876971 86899931 + MGP_CBAJ_P0030758 Rab11fip4 protein_coding protein_coding MGP_CBAJ_T0029435.1 MGP_CBAJ_G0018215.1 mouse_genomes_project 11 72648010 72676767 + MGP_CBAJ_P0029435 Myh4 protein_coding unknown_likely_coding MGP_CBAJ_T0029436.1 MGP_CBAJ_G0018215.1 mouse_genomes_project 11 72648410 72676873 + MGP_CBAJ_P0029436 Myh4 protein_coding protein_coding MGP_CBAJ_T0029437.1 MGP_CBAJ_G0018215.1 mouse_genomes_project 11 72650978 72676832 + MGP_CBAJ_P0029437 Myh4 protein_coding protein_coding MGP_CBAJ_T0032733.1 MGP_CBAJ_G0019031.1 mouse_genomes_project 11 118186697 118207627 + MGP_CBAJ_P0032733 Milr1 protein_coding protein_coding MGP_CBAJ_T0032734.1 MGP_CBAJ_G0019031.1 mouse_genomes_project 11 118186711 118205974 + MGP_CBAJ_P0032734 Milr1 protein_coding protein_coding MGP_CBAJ_T0032735.1 MGP_CBAJ_G0019031.1 mouse_genomes_project 11 118186711 118205974 + MGP_CBAJ_P0032735 Milr1 protein_coding protein_coding MGP_CBAJ_T0032736.1 MGP_CBAJ_G0019031.1 mouse_genomes_project 11 118186711 118206397 + MGP_CBAJ_P0032736 Milr1 protein_coding protein_coding MGP_CBAJ_T0032737.1 MGP_CBAJ_G0019031.1 mouse_genomes_project 11 118186736 118207552 + MGP_CBAJ_P0032737 Milr1 protein_coding protein_coding MGP_CBAJ_T0032738.1 MGP_CBAJ_G0019031.1 mouse_genomes_project 11 118186739 118207550 + MGP_CBAJ_P0032738 Milr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032739.1 MGP_CBAJ_G0019031.1 mouse_genomes_project 11 118186739 118206598 + MGP_CBAJ_P0032739 Milr1 protein_coding protein_coding MGP_CBAJ_T0032740.1 MGP_CBAJ_G0019031.1 mouse_genomes_project 11 118190415 118207553 + MGP_CBAJ_P0032740 Milr1 protein_coding protein_coding MGP_CBAJ_T0029022.1 MGP_CBAJ_G0018127.1 mouse_genomes_project 11 63879509 63898271 - MGP_CBAJ_P0029022 Zkscan17 protein_coding protein_coding MGP_CBAJ_T0029023.1 MGP_CBAJ_G0018127.1 mouse_genomes_project 11 63893592 63900299 - Zkscan17 protein_coding processed_transcript MGP_CBAJ_T0029024.1 MGP_CBAJ_G0018127.1 mouse_genomes_project 11 63898231 63923001 - Zkscan17 protein_coding processed_transcript MGP_CBAJ_T0029025.1 MGP_CBAJ_G0018127.1 mouse_genomes_project 11 63898237 63900299 - Zkscan17 protein_coding processed_transcript MGP_CBAJ_T0029026.1 MGP_CBAJ_G0018127.1 mouse_genomes_project 11 63921821 63923121 - Zkscan17 protein_coding processed_transcript MGP_CBAJ_T0000814.1 MGP_CBAJ_G0000750.1 mouse_genomes_project 11 47595095 47620558 - TEC TEC MGP_CBAJ_T0006227.1 MGP_CBAJ_G0005189.1 mouse_genomes_project 11 99508762 99631109 + 4930405D11Rik lincRNA lincRNA MGP_CBAJ_T0006228.1 MGP_CBAJ_G0005189.1 mouse_genomes_project 11 99618070 99631053 + 4930405D11Rik lincRNA lincRNA MGP_CBAJ_T0006229.1 MGP_CBAJ_G0005189.1 mouse_genomes_project 11 99618095 99630959 + 4930405D11Rik lincRNA lincRNA MGP_CBAJ_T0030551.1 MGP_CBAJ_G0018479.1 mouse_genomes_project 11 84733464 84737748 - MGP_CBAJ_P0030551 Gm10277 protein_coding protein_coding MGP_CBAJ_T0028844.1 MGP_CBAJ_G0018052.1 mouse_genomes_project 11 58979650 59009115 - MGP_CBAJ_P0028844 Slc36a3 protein_coding protein_coding MGP_CBAJ_T0028845.1 MGP_CBAJ_G0018052.1 mouse_genomes_project 11 58979660 59009093 - MGP_CBAJ_P0028845 Slc36a3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028846.1 MGP_CBAJ_G0018052.1 mouse_genomes_project 11 59006897 59009115 - MGP_CBAJ_P0028846 Slc36a3 protein_coding protein_coding MGP_CBAJ_T0006214.1 MGP_CBAJ_G0005180.1 mouse_genomes_project 11 96369636 96386165 - lincRNA lincRNA MGP_CBAJ_T0012610.1 MGP_CBAJ_G0010722.1 mouse_genomes_project 11 127032583 127032885 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012616.1 MGP_CBAJ_G0010728.1 mouse_genomes_project 11 128348684 128348898 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000804.1 MGP_CBAJ_G0000740.1 mouse_genomes_project 11 7744606 7744969 - TEC TEC MGP_CBAJ_T0032470.1 MGP_CBAJ_G0018967.1 mouse_genomes_project 11 113713181 113717192 + MGP_CBAJ_P0032470 Ccdc103 protein_coding protein_coding MGP_CBAJ_T0032471.1 MGP_CBAJ_G0018967.1 mouse_genomes_project 11 113713222 113716505 + MGP_CBAJ_P0032471 Ccdc103 protein_coding protein_coding MGP_CBAJ_T0009549.1 MGP_CBAJ_G0007687.1 mouse_genomes_project 11 39451703 39451780 - Gm25693 miRNA miRNA MGP_CBAJ_T0030272.1 MGP_CBAJ_G0018418.1 mouse_genomes_project 11 81101747 81128208 + MGP_CBAJ_P0030272 Ccdc92b protein_coding protein_coding MGP_CBAJ_T0031891.1 MGP_CBAJ_G0018811.1 mouse_genomes_project 11 109373607 109384974 - MGP_CBAJ_P0031891 Krt222 protein_coding protein_coding MGP_CBAJ_T0031892.1 MGP_CBAJ_G0018811.1 mouse_genomes_project 11 109374736 109384992 - MGP_CBAJ_P0031892 Krt222 protein_coding protein_coding MGP_CBAJ_T0031893.1 MGP_CBAJ_G0018811.1 mouse_genomes_project 11 109375797 109379757 - Krt222 protein_coding processed_transcript MGP_CBAJ_T0032015.1 MGP_CBAJ_G0018881.1 mouse_genomes_project 11 110993679 110995648 - Dnajc7 protein_coding processed_transcript MGP_CBAJ_T0032016.1 MGP_CBAJ_G0018881.1 mouse_genomes_project 11 110993679 111038527 - MGP_CBAJ_P0032016 Dnajc7 protein_coding protein_coding MGP_CBAJ_T0032017.1 MGP_CBAJ_G0018881.1 mouse_genomes_project 11 110994125 110996354 - Dnajc7 protein_coding processed_transcript MGP_CBAJ_T0032018.1 MGP_CBAJ_G0018881.1 mouse_genomes_project 11 110995201 111001830 - Dnajc7 protein_coding processed_transcript MGP_CBAJ_T0032019.1 MGP_CBAJ_G0018881.1 mouse_genomes_project 11 111001688 111037936 - MGP_CBAJ_P0032019 Dnajc7 protein_coding protein_coding MGP_CBAJ_T0032020.1 MGP_CBAJ_G0018881.1 mouse_genomes_project 11 111001695 111037957 - Dnajc7 protein_coding processed_transcript MGP_CBAJ_T0032021.1 MGP_CBAJ_G0018881.1 mouse_genomes_project 11 111001820 111007515 - Dnajc7 protein_coding processed_transcript MGP_CBAJ_T0032022.1 MGP_CBAJ_G0018881.1 mouse_genomes_project 11 111003765 111027971 - MGP_CBAJ_P0032022 Dnajc7 protein_coding protein_coding MGP_CBAJ_T0032023.1 MGP_CBAJ_G0018881.1 mouse_genomes_project 11 111008233 111037939 - Dnajc7 protein_coding processed_transcript MGP_CBAJ_T0032024.1 MGP_CBAJ_G0018881.1 mouse_genomes_project 11 111009142 111038019 - Dnajc7 protein_coding processed_transcript MGP_CBAJ_T0012605.1 MGP_CBAJ_G0010717.1 mouse_genomes_project 11 123660048 123660538 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0027448.1 MGP_CBAJ_G0017703.1 mouse_genomes_project 11 1331348 1364233 - MGP_CBAJ_P0027448 Sec14l2 protein_coding protein_coding MGP_CBAJ_T0027449.1 MGP_CBAJ_G0017703.1 mouse_genomes_project 11 1332084 1364098 - Sec14l2 protein_coding processed_transcript MGP_CBAJ_T0027450.1 MGP_CBAJ_G0017703.1 mouse_genomes_project 11 1332084 1351276 - Sec14l2 protein_coding processed_transcript MGP_CBAJ_T0027451.1 MGP_CBAJ_G0017703.1 mouse_genomes_project 11 1337425 1351026 - Sec14l2 protein_coding processed_transcript MGP_CBAJ_T0027452.1 MGP_CBAJ_G0017703.1 mouse_genomes_project 11 1353159 1368817 - Sec14l2 protein_coding processed_transcript MGP_CBAJ_T0027453.1 MGP_CBAJ_G0017703.1 mouse_genomes_project 11 1361858 1364155 - Sec14l2 protein_coding processed_transcript MGP_CBAJ_T0012562.1 MGP_CBAJ_G0010674.1 mouse_genomes_project 11 104529472 104530114 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012624.1 MGP_CBAJ_G0010736.1 mouse_genomes_project 11 134103141 134105589 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006085.1 MGP_CBAJ_G0005074.1 mouse_genomes_project 11 13096134 13138429 - 1700046C09Rik lincRNA lincRNA MGP_CBAJ_T0006230.1 MGP_CBAJ_G0005190.1 mouse_genomes_project 11 104579106 104581449 - Gm11515 lincRNA lincRNA MGP_CBAJ_T0099927.1 MGP_CBAJ_G0038182.1 mouse_genomes_project 11 65372114 65372240 + Gm24945 snoRNA snoRNA MGP_CBAJ_T0012451.1 MGP_CBAJ_G0010563.1 mouse_genomes_project 11 57237303 57237936 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012586.1 MGP_CBAJ_G0010698.1 mouse_genomes_project 11 114563347 114564211 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031814.1 MGP_CBAJ_G0018796.1 mouse_genomes_project 11 108750377 108774777 - Med24 protein_coding retained_intron MGP_CBAJ_T0031815.1 MGP_CBAJ_G0018796.1 mouse_genomes_project 11 108750377 108775378 - MGP_CBAJ_P0031815 Med24 protein_coding protein_coding MGP_CBAJ_T0031816.1 MGP_CBAJ_G0018796.1 mouse_genomes_project 11 108750629 108752267 - Med24 protein_coding retained_intron MGP_CBAJ_T0031817.1 MGP_CBAJ_G0018796.1 mouse_genomes_project 11 108750686 108775353 - MGP_CBAJ_P0031817 Med24 protein_coding protein_coding MGP_CBAJ_T0031818.1 MGP_CBAJ_G0018796.1 mouse_genomes_project 11 108750686 108775310 - MGP_CBAJ_P0031818 Med24 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031819.1 MGP_CBAJ_G0018796.1 mouse_genomes_project 11 108752213 108753038 - Med24 protein_coding retained_intron MGP_CBAJ_T0031820.1 MGP_CBAJ_G0018796.1 mouse_genomes_project 11 108753052 108753790 - Med24 protein_coding processed_transcript MGP_CBAJ_T0031821.1 MGP_CBAJ_G0018796.1 mouse_genomes_project 11 108754628 108775361 - Med24 protein_coding retained_intron MGP_CBAJ_T0031822.1 MGP_CBAJ_G0018796.1 mouse_genomes_project 11 108755432 108756853 - Med24 protein_coding retained_intron MGP_CBAJ_T0031823.1 MGP_CBAJ_G0018796.1 mouse_genomes_project 11 108763852 108764753 - Med24 protein_coding processed_transcript MGP_CBAJ_T0031824.1 MGP_CBAJ_G0018796.1 mouse_genomes_project 11 108764493 108775317 - MGP_CBAJ_P0031824 Med24 protein_coding protein_coding MGP_CBAJ_T0031825.1 MGP_CBAJ_G0018796.1 mouse_genomes_project 11 108764580 108775346 - Med24 protein_coding retained_intron MGP_CBAJ_T0006155.1 MGP_CBAJ_G0005136.1 mouse_genomes_project 11 64352077 64362056 + Gm12714 lincRNA lincRNA MGP_CBAJ_T0029901.1 MGP_CBAJ_G0018317.1 mouse_genomes_project 11 76294110 76301974 - MGP_CBAJ_P0029901 Alox15 protein_coding protein_coding MGP_CBAJ_T0029902.1 MGP_CBAJ_G0018317.1 mouse_genomes_project 11 76294563 76295655 - Alox15 protein_coding processed_transcript MGP_CBAJ_T0029442.1 MGP_CBAJ_G0018217.1 mouse_genomes_project 11 72749435 72811528 + MGP_CBAJ_P0029442 Myh13 protein_coding protein_coding MGP_CBAJ_T0029443.1 MGP_CBAJ_G0018217.1 mouse_genomes_project 11 72749557 72811528 + MGP_CBAJ_P0029443 Myh13 protein_coding protein_coding MGP_CBAJ_T0029444.1 MGP_CBAJ_G0018217.1 mouse_genomes_project 11 72753220 72811444 + MGP_CBAJ_P0029444 Myh13 protein_coding unknown_likely_coding MGP_CBAJ_T0029445.1 MGP_CBAJ_G0018217.1 mouse_genomes_project 11 72757319 72811444 + MGP_CBAJ_P0029445 Myh13 protein_coding protein_coding MGP_CBAJ_T0029446.1 MGP_CBAJ_G0018217.1 mouse_genomes_project 11 72800877 72809141 + MGP_CBAJ_P0029446 Myh13 protein_coding protein_coding MGP_CBAJ_T0003169.1 MGP_CBAJ_G0002938.1 mouse_genomes_project 11 88829431 88846905 + 4930527B05Rik antisense antisense MGP_CBAJ_T0099920.1 MGP_CBAJ_G0038175.1 mouse_genomes_project 11 51522433 51522500 + Gm25296 snoRNA snoRNA MGP_CBAJ_T0030475.1 MGP_CBAJ_G0018463.1 mouse_genomes_project 11 83695050 83715185 + MGP_CBAJ_P0030475 Tmigd1 protein_coding protein_coding MGP_CBAJ_T0030476.1 MGP_CBAJ_G0018463.1 mouse_genomes_project 11 83697366 83708712 + MGP_CBAJ_P0030476 Tmigd1 protein_coding protein_coding MGP_CBAJ_T0030477.1 MGP_CBAJ_G0018463.1 mouse_genomes_project 11 83697436 83715184 + MGP_CBAJ_P0030477 Tmigd1 protein_coding protein_coding MGP_CBAJ_T0030478.1 MGP_CBAJ_G0018463.1 mouse_genomes_project 11 83697453 83714695 + Tmigd1 protein_coding processed_transcript MGP_CBAJ_T0030090.1 MGP_CBAJ_G0018353.1 mouse_genomes_project 11 78158646 78159897 + MGP_CBAJ_P0030090 Fam64a protein_coding protein_coding MGP_CBAJ_T0030091.1 MGP_CBAJ_G0018353.1 mouse_genomes_project 11 78159069 78163985 + MGP_CBAJ_P0030091 Fam64a protein_coding protein_coding MGP_CBAJ_T0030092.1 MGP_CBAJ_G0018353.1 mouse_genomes_project 11 78159116 78160279 + Fam64a protein_coding processed_transcript MGP_CBAJ_T0030093.1 MGP_CBAJ_G0018353.1 mouse_genomes_project 11 78159138 78162708 + Fam64a protein_coding processed_transcript MGP_CBAJ_T0030094.1 MGP_CBAJ_G0018353.1 mouse_genomes_project 11 78159536 78161655 + MGP_CBAJ_P0030094 Fam64a protein_coding protein_coding MGP_CBAJ_T0029244.1 MGP_CBAJ_G0018171.1 mouse_genomes_project 11 66367216 66417530 - Slc5a10 protein_coding processed_transcript MGP_CBAJ_T0029245.1 MGP_CBAJ_G0018171.1 mouse_genomes_project 11 66367217 66416650 - MGP_CBAJ_P0029245 Slc5a10 protein_coding protein_coding MGP_CBAJ_T0029246.1 MGP_CBAJ_G0018171.1 mouse_genomes_project 11 66367217 66417503 - MGP_CBAJ_P0029246 Slc5a10 protein_coding protein_coding MGP_CBAJ_T0029247.1 MGP_CBAJ_G0018171.1 mouse_genomes_project 11 66367227 66416701 - MGP_CBAJ_P0029247 Slc5a10 protein_coding protein_coding MGP_CBAJ_T0027740.1 MGP_CBAJ_G0017771.1 mouse_genomes_project 11 9300524 9448891 + MGP_CBAJ_P0027740 Vwc2 protein_coding protein_coding MGP_CBAJ_T0027741.1 MGP_CBAJ_G0017771.1 mouse_genomes_project 11 9301045 9454360 + MGP_CBAJ_P0027741 Vwc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027742.1 MGP_CBAJ_G0017771.1 mouse_genomes_project 11 9302152 9452084 + MGP_CBAJ_P0027742 Vwc2 protein_coding protein_coding MGP_CBAJ_T0027743.1 MGP_CBAJ_G0017771.1 mouse_genomes_project 11 9302786 9314449 + Vwc2 protein_coding processed_transcript MGP_CBAJ_T0030455.1 MGP_CBAJ_G0018458.1 mouse_genomes_project 11 83157576 83273422 - MGP_CBAJ_P0030455 Abr protein_coding protein_coding MGP_CBAJ_T0030456.1 MGP_CBAJ_G0018458.1 mouse_genomes_project 11 83157576 83336175 - MGP_CBAJ_P0030456 Abr protein_coding protein_coding MGP_CBAJ_T0030457.1 MGP_CBAJ_G0018458.1 mouse_genomes_project 11 83157577 83272999 - MGP_CBAJ_P0030457 Abr protein_coding protein_coding MGP_CBAJ_T0030458.1 MGP_CBAJ_G0018458.1 mouse_genomes_project 11 83157593 83220417 - MGP_CBAJ_P0030458 Abr protein_coding protein_coding MGP_CBAJ_T0030459.1 MGP_CBAJ_G0018458.1 mouse_genomes_project 11 83159950 83250050 - MGP_CBAJ_P0030459 Abr protein_coding protein_coding MGP_CBAJ_T0030460.1 MGP_CBAJ_G0018458.1 mouse_genomes_project 11 83163891 83178064 - Abr protein_coding processed_transcript MGP_CBAJ_T0030461.1 MGP_CBAJ_G0018458.1 mouse_genomes_project 11 83199147 83220257 - MGP_CBAJ_P0030461 Abr protein_coding nonsense_mediated_decay MGP_CBAJ_T0030462.1 MGP_CBAJ_G0018458.1 mouse_genomes_project 11 83205087 83249605 - Abr protein_coding retained_intron MGP_CBAJ_T0030463.1 MGP_CBAJ_G0018458.1 mouse_genomes_project 11 83216328 83248541 - MGP_CBAJ_P0030463 Abr protein_coding protein_coding MGP_CBAJ_T0030464.1 MGP_CBAJ_G0018458.1 mouse_genomes_project 11 83233613 83342391 - MGP_CBAJ_P0030464 Abr protein_coding protein_coding MGP_CBAJ_T0030465.1 MGP_CBAJ_G0018458.1 mouse_genomes_project 11 83233667 83390754 - MGP_CBAJ_P0030465 Abr protein_coding protein_coding MGP_CBAJ_T0030466.1 MGP_CBAJ_G0018458.1 mouse_genomes_project 11 83233723 83381837 - MGP_CBAJ_P0030466 Abr protein_coding protein_coding MGP_CBAJ_T0030467.1 MGP_CBAJ_G0018458.1 mouse_genomes_project 11 83240360 83249584 - Abr protein_coding processed_transcript MGP_CBAJ_T0028586.1 MGP_CBAJ_G0017989.1 mouse_genomes_project 11 54158903 54159845 + MGP_CBAJ_P0028586 Olfr54 protein_coding protein_coding MGP_CBAJ_T0033639.1 MGP_CBAJ_G0019212.1 mouse_genomes_project 11 133326507 133377462 - MGP_CBAJ_P0033639 Slc38a10 protein_coding protein_coding MGP_CBAJ_T0033640.1 MGP_CBAJ_G0019212.1 mouse_genomes_project 11 133326988 133377194 - MGP_CBAJ_P0033640 Slc38a10 protein_coding protein_coding MGP_CBAJ_T0033641.1 MGP_CBAJ_G0019212.1 mouse_genomes_project 11 133328168 133329536 - Slc38a10 protein_coding processed_transcript MGP_CBAJ_T0033642.1 MGP_CBAJ_G0019212.1 mouse_genomes_project 11 133328225 133331136 - Slc38a10 protein_coding processed_transcript MGP_CBAJ_T0033643.1 MGP_CBAJ_G0019212.1 mouse_genomes_project 11 133328339 133332994 - Slc38a10 protein_coding processed_transcript MGP_CBAJ_T0033644.1 MGP_CBAJ_G0019212.1 mouse_genomes_project 11 133328352 133333006 - Slc38a10 protein_coding processed_transcript MGP_CBAJ_T0033645.1 MGP_CBAJ_G0019212.1 mouse_genomes_project 11 133328420 133332875 - Slc38a10 protein_coding processed_transcript MGP_CBAJ_T0033646.1 MGP_CBAJ_G0019212.1 mouse_genomes_project 11 133331084 133332886 - Slc38a10 protein_coding processed_transcript MGP_CBAJ_T0033647.1 MGP_CBAJ_G0019212.1 mouse_genomes_project 11 133333551 133377395 - Slc38a10 protein_coding processed_transcript MGP_CBAJ_T0033648.1 MGP_CBAJ_G0019212.1 mouse_genomes_project 11 133341419 133377462 - MGP_CBAJ_P0033648 Slc38a10 protein_coding protein_coding MGP_CBAJ_T0033649.1 MGP_CBAJ_G0019212.1 mouse_genomes_project 11 133346400 133377462 - MGP_CBAJ_P0033649 Slc38a10 protein_coding protein_coding MGP_CBAJ_T0033650.1 MGP_CBAJ_G0019212.1 mouse_genomes_project 11 133355377 133377436 - Slc38a10 protein_coding processed_transcript MGP_CBAJ_T0033651.1 MGP_CBAJ_G0019212.1 mouse_genomes_project 11 133360948 133377403 - Slc38a10 protein_coding processed_transcript MGP_CBAJ_T0033652.1 MGP_CBAJ_G0019212.1 mouse_genomes_project 11 133364116 133377438 - Slc38a10 protein_coding processed_transcript MGP_CBAJ_T0033653.1 MGP_CBAJ_G0019212.1 mouse_genomes_project 11 133365255 133368926 - Slc38a10 protein_coding processed_transcript MGP_CBAJ_T0030769.1 MGP_CBAJ_G0018529.1 mouse_genomes_project 11 87319800 87358629 - MGP_CBAJ_P0030769 Crlf3 protein_coding protein_coding MGP_CBAJ_T0030770.1 MGP_CBAJ_G0018529.1 mouse_genomes_project 11 87320791 87358616 - MGP_CBAJ_P0030770 Crlf3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030771.1 MGP_CBAJ_G0018529.1 mouse_genomes_project 11 87320791 87358599 - MGP_CBAJ_P0030771 Crlf3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030772.1 MGP_CBAJ_G0018529.1 mouse_genomes_project 11 87329402 87358623 - Crlf3 protein_coding processed_transcript MGP_CBAJ_T0030773.1 MGP_CBAJ_G0018529.1 mouse_genomes_project 11 87329524 87331207 - Crlf3 protein_coding retained_intron MGP_CBAJ_T0030774.1 MGP_CBAJ_G0018529.1 mouse_genomes_project 11 87332619 87358548 - MGP_CBAJ_P0030774 Crlf3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030775.1 MGP_CBAJ_G0018529.1 mouse_genomes_project 11 87335991 87358625 - Crlf3 protein_coding retained_intron MGP_CBAJ_T0029459.1 MGP_CBAJ_G0018221.1 mouse_genomes_project 11 73268810 73287964 + MGP_CBAJ_P0029459 Gsg1l2 protein_coding protein_coding MGP_CBAJ_T0029460.1 MGP_CBAJ_G0018221.1 mouse_genomes_project 11 73275139 73283400 + MGP_CBAJ_P0029460 Gsg1l2 protein_coding protein_coding MGP_CBAJ_T0029229.1 MGP_CBAJ_G0018169.1 mouse_genomes_project 11 66180535 66244572 - MGP_CBAJ_P0029229 Epn2 protein_coding protein_coding MGP_CBAJ_T0029230.1 MGP_CBAJ_G0018169.1 mouse_genomes_project 11 66180535 66244572 - MGP_CBAJ_P0029230 Epn2 protein_coding protein_coding MGP_CBAJ_T0029231.1 MGP_CBAJ_G0018169.1 mouse_genomes_project 11 66180535 66244588 - MGP_CBAJ_P0029231 Epn2 protein_coding protein_coding MGP_CBAJ_T0029232.1 MGP_CBAJ_G0018169.1 mouse_genomes_project 11 66180535 66244588 - MGP_CBAJ_P0029232 Epn2 protein_coding protein_coding MGP_CBAJ_T0029233.1 MGP_CBAJ_G0018169.1 mouse_genomes_project 11 66180536 66244590 - MGP_CBAJ_P0029233 Epn2 protein_coding protein_coding MGP_CBAJ_T0029234.1 MGP_CBAJ_G0018169.1 mouse_genomes_project 11 66180536 66244590 - MGP_CBAJ_P0029234 Epn2 protein_coding protein_coding MGP_CBAJ_T0029235.1 MGP_CBAJ_G0018169.1 mouse_genomes_project 11 66186453 66209663 - MGP_CBAJ_P0029235 Epn2 protein_coding protein_coding MGP_CBAJ_T0029236.1 MGP_CBAJ_G0018169.1 mouse_genomes_project 11 66195955 66207603 - MGP_CBAJ_P0029236 Epn2 protein_coding protein_coding MGP_CBAJ_T0029237.1 MGP_CBAJ_G0018169.1 mouse_genomes_project 11 66197683 66209832 - Epn2 protein_coding retained_intron MGP_CBAJ_T0029238.1 MGP_CBAJ_G0018169.1 mouse_genomes_project 11 66209795 66244561 - MGP_CBAJ_P0029238 Epn2 protein_coding protein_coding MGP_CBAJ_T0029239.1 MGP_CBAJ_G0018169.1 mouse_genomes_project 11 66209981 66244561 - MGP_CBAJ_P0029239 Epn2 protein_coding protein_coding MGP_CBAJ_T0029240.1 MGP_CBAJ_G0018169.1 mouse_genomes_project 11 66210038 66244565 - Epn2 protein_coding processed_transcript MGP_CBAJ_T0029241.1 MGP_CBAJ_G0018169.1 mouse_genomes_project 11 66218213 66244573 - Epn2 protein_coding processed_transcript MGP_CBAJ_T0028707.1 MGP_CBAJ_G0018020.1 mouse_genomes_project 11 57007486 57018049 + MGP_CBAJ_P0028707 Shroom1 protein_coding protein_coding MGP_CBAJ_T0028708.1 MGP_CBAJ_G0018020.1 mouse_genomes_project 11 57007511 57017581 + MGP_CBAJ_P0028708 Shroom1 protein_coding protein_coding MGP_CBAJ_T0028709.1 MGP_CBAJ_G0018020.1 mouse_genomes_project 11 57007527 57018038 + Shroom1 protein_coding retained_intron MGP_CBAJ_T0028710.1 MGP_CBAJ_G0018020.1 mouse_genomes_project 11 57007530 57017784 + Shroom1 protein_coding retained_intron MGP_CBAJ_T0028711.1 MGP_CBAJ_G0018020.1 mouse_genomes_project 11 57007560 57017585 + MGP_CBAJ_P0028711 Shroom1 protein_coding protein_coding MGP_CBAJ_T0028712.1 MGP_CBAJ_G0018020.1 mouse_genomes_project 11 57015778 57016136 + Shroom1 protein_coding processed_transcript MGP_CBAJ_T0031253.1 MGP_CBAJ_G0018654.1 mouse_genomes_project 11 97485207 97516333 + MGP_CBAJ_P0031253 Coil protein_coding protein_coding MGP_CBAJ_T0031254.1 MGP_CBAJ_G0018654.1 mouse_genomes_project 11 97491578 97516333 + MGP_CBAJ_P0031254 Coil protein_coding protein_coding MGP_CBAJ_T0031255.1 MGP_CBAJ_G0018654.1 mouse_genomes_project 11 97507362 97515674 + Coil protein_coding retained_intron MGP_CBAJ_T0029008.1 MGP_CBAJ_G0018122.1 mouse_genomes_project 11 63676502 63705973 + MGP_CBAJ_P0029008 Wnt9a protein_coding protein_coding MGP_CBAJ_T0029009.1 MGP_CBAJ_G0018122.1 mouse_genomes_project 11 63676504 63705973 + MGP_CBAJ_P0029009 Wnt9a protein_coding protein_coding MGP_CBAJ_T0097913.1 MGP_CBAJ_G0036186.1 mouse_genomes_project 11 108196821 108196928 - n-R5s73 rRNA rRNA MGP_CBAJ_T0031223.1 MGP_CBAJ_G0018646.1 mouse_genomes_project 11 96412292 96428753 + MGP_CBAJ_P0031223 Vezf1 protein_coding protein_coding MGP_CBAJ_T0031224.1 MGP_CBAJ_G0018646.1 mouse_genomes_project 11 96417604 96428753 + MGP_CBAJ_P0031224 Vezf1 protein_coding protein_coding MGP_CBAJ_T0006257.1 MGP_CBAJ_G0005211.1 mouse_genomes_project 11 123876492 123881065 - Gm11674 lincRNA lincRNA MGP_CBAJ_T0003126.1 MGP_CBAJ_G0002902.1 mouse_genomes_project 11 67451772 67456491 + Lrrc75aos1 antisense antisense MGP_CBAJ_T0027874.1 MGP_CBAJ_G0017802.1 mouse_genomes_project 11 20892205 20907676 - MGP_CBAJ_P0027874 Mdh1 protein_coding protein_coding MGP_CBAJ_T0027875.1 MGP_CBAJ_G0017802.1 mouse_genomes_project 11 20893908 20895148 - Mdh1 protein_coding processed_transcript MGP_CBAJ_T0027876.1 MGP_CBAJ_G0017802.1 mouse_genomes_project 11 20894940 20899626 - Mdh1 protein_coding processed_transcript MGP_CBAJ_T0027877.1 MGP_CBAJ_G0017802.1 mouse_genomes_project 11 20898314 20907850 - MGP_CBAJ_P0027877 Mdh1 protein_coding protein_coding MGP_CBAJ_T0012341.1 MGP_CBAJ_G0010453.1 mouse_genomes_project 11 13290068 13290665 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101570.1 MGP_CBAJ_G0039602.1 mouse_genomes_project 11 134076938 134082691 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0016993.1 MGP_CBAJ_G0014942.1 mouse_genomes_project 11 107442736 107465216 - Gm11613 processed_transcript processed_transcript MGP_CBAJ_T0097898.1 MGP_CBAJ_G0036171.1 mouse_genomes_project 11 3870203 3870317 + n-R5s67 rRNA rRNA MGP_CBAJ_T0029250.1 MGP_CBAJ_G0018173.1 mouse_genomes_project 11 66426357 66465223 - MGP_CBAJ_P0029250 Prpsap2 protein_coding protein_coding MGP_CBAJ_T0029251.1 MGP_CBAJ_G0018173.1 mouse_genomes_project 11 66426360 66465197 - MGP_CBAJ_P0029251 Prpsap2 protein_coding protein_coding MGP_CBAJ_T0029252.1 MGP_CBAJ_G0018173.1 mouse_genomes_project 11 66426361 66465147 - Prpsap2 protein_coding processed_transcript MGP_CBAJ_T0029253.1 MGP_CBAJ_G0018173.1 mouse_genomes_project 11 66458621 66465175 - Prpsap2 protein_coding processed_transcript MGP_CBAJ_T0028320.1 MGP_CBAJ_G0017910.1 mouse_genomes_project 11 46872602 47299464 + MGP_CBAJ_P0028320 Ebf1 protein_coding protein_coding MGP_CBAJ_T0028321.1 MGP_CBAJ_G0017910.1 mouse_genomes_project 11 46872602 47299998 + MGP_CBAJ_P0028321 Ebf1 protein_coding protein_coding MGP_CBAJ_T0028322.1 MGP_CBAJ_G0017910.1 mouse_genomes_project 11 46878297 47302563 + MGP_CBAJ_P0028322 Ebf1 protein_coding protein_coding MGP_CBAJ_T0028323.1 MGP_CBAJ_G0017910.1 mouse_genomes_project 11 46878315 46907087 + Ebf1 protein_coding processed_transcript MGP_CBAJ_T0028324.1 MGP_CBAJ_G0017910.1 mouse_genomes_project 11 46878378 46903698 + Ebf1 protein_coding processed_transcript MGP_CBAJ_T0028325.1 MGP_CBAJ_G0017910.1 mouse_genomes_project 11 46878420 47299217 + MGP_CBAJ_P0028325 Ebf1 protein_coding unknown_likely_coding MGP_CBAJ_T0028326.1 MGP_CBAJ_G0017910.1 mouse_genomes_project 11 46881980 46903688 + Ebf1 protein_coding processed_transcript MGP_CBAJ_T0028327.1 MGP_CBAJ_G0017910.1 mouse_genomes_project 11 47198020 47262897 + Ebf1 protein_coding processed_transcript MGP_CBAJ_T0003225.1 MGP_CBAJ_G0002978.1 mouse_genomes_project 11 111794186 111799501 - antisense antisense MGP_CBAJ_T0003263.1 MGP_CBAJ_G0003011.1 mouse_genomes_project 11 121228100 121229087 - Gm15642 antisense antisense MGP_CBAJ_T0027811.1 MGP_CBAJ_G0017786.1 mouse_genomes_project 11 16011397 16063528 + Wdr92 protein_coding processed_transcript MGP_CBAJ_T0027815.1 MGP_CBAJ_G0017786.1 mouse_genomes_project 11 16042724 16064410 + MGP_CBAJ_P0027815 Wdr92 protein_coding protein_coding MGP_CBAJ_T0030901.1 MGP_CBAJ_G0018568.1 mouse_genomes_project 11 90968459 90980514 - MGP_CBAJ_P0030901 Slfn14 protein_coding protein_coding MGP_CBAJ_T0006256.1 MGP_CBAJ_G0005210.1 mouse_genomes_project 11 122493270 122495032 + Gm11682 lincRNA lincRNA MGP_CBAJ_T0033078.1 MGP_CBAJ_G0019109.1 mouse_genomes_project 11 127979487 127993128 + MGP_CBAJ_P0033078 Slc16a5 protein_coding protein_coding MGP_CBAJ_T0033079.1 MGP_CBAJ_G0019109.1 mouse_genomes_project 11 127979519 127988032 + MGP_CBAJ_P0033079 Slc16a5 protein_coding protein_coding MGP_CBAJ_T0033080.1 MGP_CBAJ_G0019109.1 mouse_genomes_project 11 127979577 127988137 + Slc16a5 protein_coding processed_transcript MGP_CBAJ_T0033081.1 MGP_CBAJ_G0019109.1 mouse_genomes_project 11 127979622 127991651 + MGP_CBAJ_P0033081 Slc16a5 protein_coding protein_coding MGP_CBAJ_T0033082.1 MGP_CBAJ_G0019109.1 mouse_genomes_project 11 127980813 127993128 + Slc16a5 protein_coding processed_transcript MGP_CBAJ_T0033083.1 MGP_CBAJ_G0019109.1 mouse_genomes_project 11 127980828 127982010 + Slc16a5 protein_coding processed_transcript MGP_CBAJ_T0033084.1 MGP_CBAJ_G0019109.1 mouse_genomes_project 11 127980831 127988137 + Slc16a5 protein_coding processed_transcript MGP_CBAJ_T0033085.1 MGP_CBAJ_G0019109.1 mouse_genomes_project 11 127980837 127988081 + Slc16a5 protein_coding processed_transcript MGP_CBAJ_T0033086.1 MGP_CBAJ_G0019109.1 mouse_genomes_project 11 127981561 127992336 + Slc16a5 protein_coding retained_intron MGP_CBAJ_T0028714.1 MGP_CBAJ_G0018022.1 mouse_genomes_project 11 57030084 57033786 - MGP_CBAJ_P0028714 Sowaha protein_coding protein_coding MGP_CBAJ_T0033127.1 MGP_CBAJ_G0019117.1 mouse_genomes_project 11 128178707 128189131 - Mif4gd protein_coding processed_transcript MGP_CBAJ_T0033128.1 MGP_CBAJ_G0019117.1 mouse_genomes_project 11 128178707 128189171 - Mif4gd protein_coding processed_transcript MGP_CBAJ_T0033129.1 MGP_CBAJ_G0019117.1 mouse_genomes_project 11 128178707 128189213 - MGP_CBAJ_P0033129 Mif4gd protein_coding protein_coding MGP_CBAJ_T0033130.1 MGP_CBAJ_G0019117.1 mouse_genomes_project 11 128178707 128183284 - MGP_CBAJ_P0033130 Mif4gd protein_coding protein_coding MGP_CBAJ_T0033131.1 MGP_CBAJ_G0019117.1 mouse_genomes_project 11 128178938 128189122 - MGP_CBAJ_P0033131 Mif4gd protein_coding protein_coding MGP_CBAJ_T0033132.1 MGP_CBAJ_G0019117.1 mouse_genomes_project 11 128178996 128189074 - Mif4gd protein_coding processed_transcript MGP_CBAJ_T0033133.1 MGP_CBAJ_G0019117.1 mouse_genomes_project 11 128179206 128189143 - Mif4gd protein_coding processed_transcript MGP_CBAJ_T0033134.1 MGP_CBAJ_G0019117.1 mouse_genomes_project 11 128179301 128182907 - MGP_CBAJ_P0033134 Mif4gd protein_coding protein_coding MGP_CBAJ_T0033135.1 MGP_CBAJ_G0019117.1 mouse_genomes_project 11 128179966 128189148 - Mif4gd protein_coding processed_transcript MGP_CBAJ_T0033136.1 MGP_CBAJ_G0019117.1 mouse_genomes_project 11 128182882 128189164 - Mif4gd protein_coding processed_transcript MGP_CBAJ_T0033492.1 MGP_CBAJ_G0019185.1 mouse_genomes_project 11 131332027 131341802 - MGP_CBAJ_P0033492 BC100451 protein_coding protein_coding MGP_CBAJ_T0033493.1 MGP_CBAJ_G0019185.1 mouse_genomes_project 11 131332082 131333684 - MGP_CBAJ_P0033493 BC100451 protein_coding protein_coding MGP_CBAJ_T0012454.1 MGP_CBAJ_G0010566.1 mouse_genomes_project 11 57571073 57571472 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0032799.1 MGP_CBAJ_G0019043.1 mouse_genomes_project 11 119316402 119380821 - MGP_CBAJ_P0032799 Cacng4 protein_coding protein_coding MGP_CBAJ_T0032800.1 MGP_CBAJ_G0019043.1 mouse_genomes_project 11 119319238 119326121 - Cacng4 protein_coding processed_transcript MGP_CBAJ_T0028269.1 MGP_CBAJ_G0017896.1 mouse_genomes_project 11 45038297 45039810 + MGP_CBAJ_P0028269 Gm9972 protein_coding protein_coding MGP_CBAJ_T0003117.1 MGP_CBAJ_G0002894.1 mouse_genomes_project 11 65507288 65521790 - Map2k3os antisense antisense MGP_CBAJ_T0029058.1 MGP_CBAJ_G0018136.1 mouse_genomes_project 11 64406301 64418791 + MGP_CBAJ_P0029058 Med9 protein_coding protein_coding MGP_CBAJ_T0098702.1 MGP_CBAJ_G0036957.1 mouse_genomes_project 11 83786446 83786596 + Gm22611 snRNA snRNA MGP_CBAJ_T0009640.1 MGP_CBAJ_G0007778.1 mouse_genomes_project 11 118365760 118365870 - Gm27322 miRNA miRNA MGP_CBAJ_T0030364.1 MGP_CBAJ_G0018440.1 mouse_genomes_project 11 82137407 82151771 + MGP_CBAJ_P0030364 Slc43a2 protein_coding protein_coding MGP_CBAJ_T0030365.1 MGP_CBAJ_G0018440.1 mouse_genomes_project 11 82137411 82191681 + MGP_CBAJ_P0030365 Slc43a2 protein_coding protein_coding MGP_CBAJ_T0030366.1 MGP_CBAJ_G0018440.1 mouse_genomes_project 11 82137411 82187839 + MGP_CBAJ_P0030366 Slc43a2 protein_coding protein_coding MGP_CBAJ_T0030367.1 MGP_CBAJ_G0018440.1 mouse_genomes_project 11 82137456 82154225 + MGP_CBAJ_P0030367 Slc43a2 protein_coding protein_coding MGP_CBAJ_T0030368.1 MGP_CBAJ_G0018440.1 mouse_genomes_project 11 82137825 82191676 + MGP_CBAJ_P0030368 Slc43a2 protein_coding protein_coding MGP_CBAJ_T0030369.1 MGP_CBAJ_G0018440.1 mouse_genomes_project 11 82137851 82154278 + MGP_CBAJ_P0030369 Slc43a2 protein_coding protein_coding MGP_CBAJ_T0030370.1 MGP_CBAJ_G0018440.1 mouse_genomes_project 11 82146437 82154212 + Slc43a2 protein_coding processed_transcript MGP_CBAJ_T0030371.1 MGP_CBAJ_G0018440.1 mouse_genomes_project 11 82174654 82180907 + Slc43a2 protein_coding retained_intron MGP_CBAJ_T0030372.1 MGP_CBAJ_G0018440.1 mouse_genomes_project 11 82179846 82184095 + Slc43a2 protein_coding processed_transcript MGP_CBAJ_T0030373.1 MGP_CBAJ_G0018440.1 mouse_genomes_project 11 82180542 82186368 + Slc43a2 protein_coding retained_intron MGP_CBAJ_T0030374.1 MGP_CBAJ_G0018440.1 mouse_genomes_project 11 82180655 82185746 + Slc43a2 protein_coding processed_transcript MGP_CBAJ_T0029971.1 MGP_CBAJ_G0018333.1 mouse_genomes_project 11 76651218 76652090 + Rnf167 protein_coding processed_transcript MGP_CBAJ_T0029972.1 MGP_CBAJ_G0018333.1 mouse_genomes_project 11 76651270 76655389 + MGP_CBAJ_P0029972 Rnf167 protein_coding protein_coding MGP_CBAJ_T0029973.1 MGP_CBAJ_G0018333.1 mouse_genomes_project 11 76651270 76655380 + MGP_CBAJ_P0029973 Rnf167 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029974.1 MGP_CBAJ_G0018333.1 mouse_genomes_project 11 76651538 76653749 + MGP_CBAJ_P0029974 Rnf167 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029975.1 MGP_CBAJ_G0018333.1 mouse_genomes_project 11 76651544 76655378 + Rnf167 protein_coding retained_intron MGP_CBAJ_T0029976.1 MGP_CBAJ_G0018333.1 mouse_genomes_project 11 76651552 76652238 + Rnf167 protein_coding retained_intron MGP_CBAJ_T0029977.1 MGP_CBAJ_G0018333.1 mouse_genomes_project 11 76651926 76654318 + Rnf167 protein_coding retained_intron MGP_CBAJ_T0029978.1 MGP_CBAJ_G0018333.1 mouse_genomes_project 11 76652058 76655059 + Rnf167 protein_coding retained_intron MGP_CBAJ_T0029979.1 MGP_CBAJ_G0018333.1 mouse_genomes_project 11 76653105 76653516 + Rnf167 protein_coding retained_intron MGP_CBAJ_T0029980.1 MGP_CBAJ_G0018333.1 mouse_genomes_project 11 76653919 76654318 + Rnf167 protein_coding retained_intron MGP_CBAJ_T0032340.1 MGP_CBAJ_G0018947.1 mouse_genomes_project 11 112953985 112974041 + MGP_CBAJ_P0032340 BC030867 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032341.1 MGP_CBAJ_G0018947.1 mouse_genomes_project 11 112953985 112974041 + MGP_CBAJ_P0032341 BC030867 protein_coding protein_coding MGP_CBAJ_T0032342.1 MGP_CBAJ_G0018947.1 mouse_genomes_project 11 112960754 112965716 + BC030867 protein_coding processed_transcript MGP_CBAJ_T0032343.1 MGP_CBAJ_G0018947.1 mouse_genomes_project 11 112960758 112965714 + BC030867 protein_coding processed_transcript MGP_CBAJ_T0032344.1 MGP_CBAJ_G0018947.1 mouse_genomes_project 11 112967063 112974041 + BC030867 protein_coding processed_transcript MGP_CBAJ_T0031431.1 MGP_CBAJ_G0018697.1 mouse_genomes_project 11 104293521 104309758 - MGP_CBAJ_P0031431 Sgca protein_coding protein_coding MGP_CBAJ_T0031432.1 MGP_CBAJ_G0018697.1 mouse_genomes_project 11 104293527 104304110 - MGP_CBAJ_P0031432 Sgca protein_coding protein_coding MGP_CBAJ_T0031433.1 MGP_CBAJ_G0018697.1 mouse_genomes_project 11 104293552 104306894 - MGP_CBAJ_P0031433 Sgca protein_coding protein_coding MGP_CBAJ_T0031434.1 MGP_CBAJ_G0018697.1 mouse_genomes_project 11 104293938 104309758 - MGP_CBAJ_P0031434 Sgca protein_coding protein_coding MGP_CBAJ_T0031436.1 MGP_CBAJ_G0018697.1 mouse_genomes_project 11 104305657 104306920 - MGP_CBAJ_P0031436 Sgca protein_coding protein_coding MGP_CBAJ_T0009586.1 MGP_CBAJ_G0007724.1 mouse_genomes_project 11 76716941 76717011 + Mir6925 miRNA miRNA MGP_CBAJ_T0011167.1 MGP_CBAJ_G0009305.1 mouse_genomes_project 11 780272 780508 - Gm27517 misc_RNA misc_RNA MGP_CBAJ_T0030121.1 MGP_CBAJ_G0018361.1 mouse_genomes_project 11 78467688 78475177 + MGP_CBAJ_P0030121 Fbxo39 protein_coding protein_coding MGP_CBAJ_T0032119.1 MGP_CBAJ_G0018903.1 mouse_genomes_project 11 111664191 111670611 + MGP_CBAJ_P0032119 protein_coding unknown_likely_coding MGP_CBAJ_T0011669.1 MGP_CBAJ_G0009804.1 mouse_genomes_project 11 79693963 79698091 - MGP_CBAJ_P0011669 Olfr377-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0030470.1 MGP_CBAJ_G0018461.1 mouse_genomes_project 11 83520249 83557090 - MGP_CBAJ_P0030470 Gosr1 protein_coding protein_coding MGP_CBAJ_T0030471.1 MGP_CBAJ_G0018461.1 mouse_genomes_project 11 83542070 83557078 - Gosr1 protein_coding processed_transcript MGP_CBAJ_T0030190.1 MGP_CBAJ_G0018379.1 mouse_genomes_project 11 79453987 79455506 - MGP_CBAJ_P0030190 Emc6 protein_coding protein_coding MGP_CBAJ_T0030191.1 MGP_CBAJ_G0018379.1 mouse_genomes_project 11 79454804 79455471 - MGP_CBAJ_P0030191 Emc6 protein_coding protein_coding MGP_CBAJ_T0016996.1 MGP_CBAJ_G0014945.1 mouse_genomes_project 11 108280721 108288292 - 1700003D09Rik processed_transcript processed_transcript MGP_CBAJ_T0027805.1 MGP_CBAJ_G0017783.1 mouse_genomes_project 11 15786742 15826380 - MGP_CBAJ_P0027805 Plek protein_coding protein_coding MGP_CBAJ_T0027806.1 MGP_CBAJ_G0017783.1 mouse_genomes_project 11 15810091 15820916 - MGP_CBAJ_P0027806 Plek protein_coding protein_coding MGP_CBAJ_T0016922.1 MGP_CBAJ_G0014902.1 mouse_genomes_project 11 30631283 30644267 + Gm8098 processed_transcript processed_transcript MGP_CBAJ_T0012483.1 MGP_CBAJ_G0010595.1 mouse_genomes_project 11 66706082 66706467 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099947.1 MGP_CBAJ_G0038202.1 mouse_genomes_project 11 85671005 85671096 - Gm22947 snoRNA snoRNA MGP_CBAJ_T0031427.1 MGP_CBAJ_G0018696.1 mouse_genomes_project 11 104264631 104281523 + MGP_CBAJ_P0031427 Col1a1 protein_coding protein_coding MGP_CBAJ_T0031428.1 MGP_CBAJ_G0018696.1 mouse_genomes_project 11 104266088 104266502 + Col1a1 protein_coding processed_transcript MGP_CBAJ_T0031429.1 MGP_CBAJ_G0018696.1 mouse_genomes_project 11 104267410 104268140 + Col1a1 protein_coding retained_intron MGP_CBAJ_T0031430.1 MGP_CBAJ_G0018696.1 mouse_genomes_project 11 104273836 104274498 + Col1a1 protein_coding retained_intron MGP_CBAJ_T0009589.1 MGP_CBAJ_G0007727.1 mouse_genomes_project 11 78873215 78873288 + Gm25678 miRNA miRNA MGP_CBAJ_T0099969.1 MGP_CBAJ_G0038224.1 mouse_genomes_project 11 134393237 134393362 + Gm22152 snoRNA snoRNA MGP_CBAJ_T0028367.1 MGP_CBAJ_G0017923.1 mouse_genomes_project 11 48976564 48992339 + MGP_CBAJ_P0028367 Gm12169 protein_coding protein_coding MGP_CBAJ_T0031930.1 MGP_CBAJ_G0018845.1 mouse_genomes_project 11 110096864 110097430 - MGP_CBAJ_P0031930 Gm11564 protein_coding protein_coding MGP_CBAJ_T0031967.1 MGP_CBAJ_G0018871.1 mouse_genomes_project 11 110731642 110741868 - MGP_CBAJ_P0031967 Hap1 protein_coding protein_coding MGP_CBAJ_T0031968.1 MGP_CBAJ_G0018871.1 mouse_genomes_project 11 110733173 110741827 - MGP_CBAJ_P0031968 Hap1 protein_coding protein_coding MGP_CBAJ_T0031969.1 MGP_CBAJ_G0018871.1 mouse_genomes_project 11 110733612 110739780 - MGP_CBAJ_P0031969 Hap1 protein_coding protein_coding MGP_CBAJ_T0031970.1 MGP_CBAJ_G0018871.1 mouse_genomes_project 11 110733732 110737646 - MGP_CBAJ_P0031970 Hap1 protein_coding protein_coding MGP_CBAJ_T0031971.1 MGP_CBAJ_G0018871.1 mouse_genomes_project 11 110737996 110741123 - MGP_CBAJ_P0031971 Hap1 protein_coding protein_coding MGP_CBAJ_T0028356.1 MGP_CBAJ_G0017921.1 mouse_genomes_project 11 48893707 48897640 + MGP_CBAJ_P0028356 Med7 protein_coding protein_coding MGP_CBAJ_T0028357.1 MGP_CBAJ_G0017921.1 mouse_genomes_project 11 48893731 48897546 + MGP_CBAJ_P0028357 Med7 protein_coding protein_coding MGP_CBAJ_T0028358.1 MGP_CBAJ_G0017921.1 mouse_genomes_project 11 48893734 48898309 + MGP_CBAJ_P0028358 Med7 protein_coding protein_coding MGP_CBAJ_T0028359.1 MGP_CBAJ_G0017921.1 mouse_genomes_project 11 48893743 48899503 + MGP_CBAJ_P0028359 Med7 protein_coding protein_coding MGP_CBAJ_T0028360.1 MGP_CBAJ_G0017921.1 mouse_genomes_project 11 48893753 48897882 + MGP_CBAJ_P0028360 Med7 protein_coding protein_coding MGP_CBAJ_T0028361.1 MGP_CBAJ_G0017921.1 mouse_genomes_project 11 48893756 48899503 + MGP_CBAJ_P0028361 Med7 protein_coding protein_coding MGP_CBAJ_T0028362.1 MGP_CBAJ_G0017921.1 mouse_genomes_project 11 48893760 48897832 + MGP_CBAJ_P0028362 Med7 protein_coding protein_coding MGP_CBAJ_T0028363.1 MGP_CBAJ_G0017921.1 mouse_genomes_project 11 48893787 48896725 + Med7 protein_coding processed_transcript MGP_CBAJ_T0028364.1 MGP_CBAJ_G0017921.1 mouse_genomes_project 11 48896434 48897760 + MGP_CBAJ_P0028364 Med7 protein_coding protein_coding MGP_CBAJ_T0099917.1 MGP_CBAJ_G0038172.1 mouse_genomes_project 11 36320119 36320256 + Gm26070 snoRNA snoRNA MGP_CBAJ_T0012614.1 MGP_CBAJ_G0010726.1 mouse_genomes_project 11 128153982 128154519 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031524.1 MGP_CBAJ_G0018722.1 mouse_genomes_project 11 105545036 105565709 - MGP_CBAJ_P0031524 Ube2z protein_coding protein_coding MGP_CBAJ_T0028216.1 MGP_CBAJ_G0017885.1 mouse_genomes_project 11 36944816 36970965 - MGP_CBAJ_P0028216 Rars protein_coding protein_coding MGP_CBAJ_T0028217.1 MGP_CBAJ_G0017885.1 mouse_genomes_project 11 36952103 36956545 - Rars protein_coding processed_transcript MGP_CBAJ_T0028218.1 MGP_CBAJ_G0017885.1 mouse_genomes_project 11 36953863 36957939 - Rars protein_coding retained_intron MGP_CBAJ_T0028219.1 MGP_CBAJ_G0017885.1 mouse_genomes_project 11 36957572 36961567 - Rars protein_coding retained_intron MGP_CBAJ_T0028220.1 MGP_CBAJ_G0017885.1 mouse_genomes_project 11 36962928 36970920 - Rars protein_coding processed_transcript MGP_CBAJ_T0028461.1 MGP_CBAJ_G0017955.1 mouse_genomes_project 11 52360052 52361584 + MGP_CBAJ_P0028461 protein_coding protein_coding MGP_CBAJ_T0003209.1 MGP_CBAJ_G0002967.1 mouse_genomes_project 11 107029258 107031768 + Gm11592 antisense antisense MGP_CBAJ_T0027929.1 MGP_CBAJ_G0017815.1 mouse_genomes_project 11 22873323 23093221 + MGP_CBAJ_P0027929 Usp34 protein_coding protein_coding MGP_CBAJ_T0027930.1 MGP_CBAJ_G0017815.1 mouse_genomes_project 11 22873344 23092405 + MGP_CBAJ_P0027930 Usp34 protein_coding protein_coding MGP_CBAJ_T0027931.1 MGP_CBAJ_G0017815.1 mouse_genomes_project 11 23005818 23011437 + Usp34 protein_coding processed_transcript MGP_CBAJ_T0027932.1 MGP_CBAJ_G0017815.1 mouse_genomes_project 11 23010839 23053902 + MGP_CBAJ_P0027932 Usp34 protein_coding protein_coding MGP_CBAJ_T0027933.1 MGP_CBAJ_G0017815.1 mouse_genomes_project 11 23055544 23058509 + Usp34 protein_coding processed_transcript MGP_CBAJ_T0027934.1 MGP_CBAJ_G0017815.1 mouse_genomes_project 11 23055683 23058223 + Usp34 protein_coding processed_transcript MGP_CBAJ_T0027935.1 MGP_CBAJ_G0017815.1 mouse_genomes_project 11 23072047 23091029 + MGP_CBAJ_P0027935 Usp34 protein_coding protein_coding MGP_CBAJ_T0027936.1 MGP_CBAJ_G0017815.1 mouse_genomes_project 11 23089465 23089984 + Usp34 protein_coding processed_transcript MGP_CBAJ_T0029321.1 MGP_CBAJ_G0018184.1 mouse_genomes_project 11 67387897 67413526 + Trpv2 protein_coding processed_transcript MGP_CBAJ_T0029322.1 MGP_CBAJ_G0018184.1 mouse_genomes_project 11 67387949 67415174 + MGP_CBAJ_P0029322 Trpv2 protein_coding protein_coding MGP_CBAJ_T0029323.1 MGP_CBAJ_G0018184.1 mouse_genomes_project 11 67388958 67394680 + Trpv2 protein_coding processed_transcript MGP_CBAJ_T0029324.1 MGP_CBAJ_G0018184.1 mouse_genomes_project 11 67389536 67413526 + MGP_CBAJ_P0029324 Trpv2 protein_coding protein_coding MGP_CBAJ_T0029325.1 MGP_CBAJ_G0018184.1 mouse_genomes_project 11 67394642 67413526 + Trpv2 protein_coding processed_transcript MGP_CBAJ_T0009650.1 MGP_CBAJ_G0007788.1 mouse_genomes_project 11 132216974 132217036 - Mir6934 miRNA miRNA MGP_CBAJ_T0028796.1 MGP_CBAJ_G0018041.1 mouse_genomes_project 11 58132932 58186652 + Meikin protein_coding retained_intron MGP_CBAJ_T0028797.1 MGP_CBAJ_G0018041.1 mouse_genomes_project 11 58132932 58186687 + MGP_CBAJ_P0028797 Meikin protein_coding protein_coding MGP_CBAJ_T0032129.1 MGP_CBAJ_G0018907.1 mouse_genomes_project 11 111699915 111742747 - MGP_CBAJ_P0032129 Ezh1 protein_coding protein_coding MGP_CBAJ_T0032130.1 MGP_CBAJ_G0018907.1 mouse_genomes_project 11 111699916 111742734 - MGP_CBAJ_P0032130 Ezh1 protein_coding protein_coding MGP_CBAJ_T0032131.1 MGP_CBAJ_G0018907.1 mouse_genomes_project 11 111702075 111703223 - Ezh1 protein_coding processed_transcript MGP_CBAJ_T0032132.1 MGP_CBAJ_G0018907.1 mouse_genomes_project 11 111702530 111716346 - Ezh1 protein_coding processed_transcript MGP_CBAJ_T0032133.1 MGP_CBAJ_G0018907.1 mouse_genomes_project 11 111708384 111710690 - Ezh1 protein_coding processed_transcript MGP_CBAJ_T0032134.1 MGP_CBAJ_G0018907.1 mouse_genomes_project 11 111708924 111742701 - MGP_CBAJ_P0032134 Ezh1 protein_coding protein_coding MGP_CBAJ_T0032135.1 MGP_CBAJ_G0018907.1 mouse_genomes_project 11 111709049 111723365 - Ezh1 protein_coding processed_transcript MGP_CBAJ_T0032136.1 MGP_CBAJ_G0018907.1 mouse_genomes_project 11 111720694 111722192 - Ezh1 protein_coding processed_transcript MGP_CBAJ_T0032137.1 MGP_CBAJ_G0018907.1 mouse_genomes_project 11 111734682 111742726 - Ezh1 protein_coding processed_transcript MGP_CBAJ_T0016934.1 MGP_CBAJ_G0014911.1 mouse_genomes_project 11 62558352 62559804 + 1700047K16Rik processed_transcript processed_transcript MGP_CBAJ_T0098682.1 MGP_CBAJ_G0036937.1 mouse_genomes_project 11 42776316 42776472 - Gm24446 snRNA snRNA MGP_CBAJ_T0012371.1 MGP_CBAJ_G0010483.1 mouse_genomes_project 11 20804229 20804802 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003081.1 MGP_CBAJ_G0002864.1 mouse_genomes_project 11 53748733 53749979 - Gm12199 antisense antisense MGP_CBAJ_T0031909.1 MGP_CBAJ_G0018824.1 mouse_genomes_project 11 109759409 109760440 - MGP_CBAJ_P0031909 protein_coding protein_coding MGP_CBAJ_T0006236.1 MGP_CBAJ_G0005196.1 mouse_genomes_project 11 105800068 105815694 + Gm53 lincRNA lincRNA MGP_CBAJ_T0006237.1 MGP_CBAJ_G0005196.1 mouse_genomes_project 11 105802953 105815908 + Gm53 lincRNA lincRNA MGP_CBAJ_T0006238.1 MGP_CBAJ_G0005196.1 mouse_genomes_project 11 105803843 105812905 + Gm53 lincRNA lincRNA MGP_CBAJ_T0006239.1 MGP_CBAJ_G0005196.1 mouse_genomes_project 11 105812821 105816079 + Gm53 lincRNA lincRNA MGP_CBAJ_T0030596.1 MGP_CBAJ_G0018485.1 mouse_genomes_project 11 85068105 85074703 - Eral1 protein_coding retained_intron MGP_CBAJ_T0030597.1 MGP_CBAJ_G0018485.1 mouse_genomes_project 11 85068105 85074703 - MGP_CBAJ_P0030597 Eral1 protein_coding protein_coding MGP_CBAJ_T0030598.1 MGP_CBAJ_G0018485.1 mouse_genomes_project 11 85069260 85070701 - Eral1 protein_coding retained_intron MGP_CBAJ_T0003273.1 MGP_CBAJ_G0003020.1 mouse_genomes_project 11 129191399 129201248 + Gm11739 antisense antisense MGP_CBAJ_T0009577.1 MGP_CBAJ_G0007715.1 mouse_genomes_project 11 75444258 75444378 - Mir467f miRNA miRNA MGP_CBAJ_T0031692.1 MGP_CBAJ_G0018766.1 mouse_genomes_project 11 107601095 107608218 - MGP_CBAJ_P0031692 1700001P01Rik protein_coding protein_coding MGP_CBAJ_T0097909.1 MGP_CBAJ_G0036182.1 mouse_genomes_project 11 91492661 91492771 - Gm22311 rRNA rRNA MGP_CBAJ_T0006195.1 MGP_CBAJ_G0005169.1 mouse_genomes_project 11 87010060 87010969 - 9130204K15Rik lincRNA lincRNA MGP_CBAJ_T0006196.1 MGP_CBAJ_G0005169.1 mouse_genomes_project 11 87010127 87119590 - 9130204K15Rik lincRNA lincRNA MGP_CBAJ_T0006197.1 MGP_CBAJ_G0005169.1 mouse_genomes_project 11 87010590 87105356 - 9130204K15Rik lincRNA lincRNA MGP_CBAJ_T0006198.1 MGP_CBAJ_G0005169.1 mouse_genomes_project 11 87025806 87037245 - 9130204K15Rik lincRNA lincRNA MGP_CBAJ_T0029480.1 MGP_CBAJ_G0018226.1 mouse_genomes_project 11 73773670 73980122 - MGP_CBAJ_P0029480 Ntn1 protein_coding protein_coding MGP_CBAJ_T0029481.1 MGP_CBAJ_G0018226.1 mouse_genomes_project 11 73773672 73961558 - MGP_CBAJ_P0029481 Ntn1 protein_coding protein_coding MGP_CBAJ_T0029482.1 MGP_CBAJ_G0018226.1 mouse_genomes_project 11 73960375 73961744 - MGP_CBAJ_P0029482 Ntn1 protein_coding protein_coding MGP_CBAJ_T0032047.1 MGP_CBAJ_G0018887.1 mouse_genomes_project 11 111148157 111176966 - MGP_CBAJ_P0032047 Rab5c protein_coding protein_coding MGP_CBAJ_T0032048.1 MGP_CBAJ_G0018887.1 mouse_genomes_project 11 111148159 111176966 - MGP_CBAJ_P0032048 Rab5c protein_coding protein_coding MGP_CBAJ_T0032049.1 MGP_CBAJ_G0018887.1 mouse_genomes_project 11 111151648 111166523 - MGP_CBAJ_P0032049 Rab5c protein_coding protein_coding MGP_CBAJ_T0032050.1 MGP_CBAJ_G0018887.1 mouse_genomes_project 11 111154226 111176927 - MGP_CBAJ_P0032050 Rab5c protein_coding protein_coding MGP_CBAJ_T0033676.1 MGP_CBAJ_G0019219.1 mouse_genomes_project 11 133722002 133726309 + MGP_CBAJ_P0033676 Tspan10 protein_coding protein_coding MGP_CBAJ_T0033677.1 MGP_CBAJ_G0019219.1 mouse_genomes_project 11 133722029 133723664 + Tspan10 protein_coding processed_transcript MGP_CBAJ_T0028587.1 MGP_CBAJ_G0017990.1 mouse_genomes_project 11 54201741 54221619 + MGP_CBAJ_P0028587 Zfp354a protein_coding protein_coding MGP_CBAJ_T0028588.1 MGP_CBAJ_G0017990.1 mouse_genomes_project 11 54201743 54202556 + Zfp354a protein_coding processed_transcript MGP_CBAJ_T0028589.1 MGP_CBAJ_G0017990.1 mouse_genomes_project 11 54201778 54223056 + MGP_CBAJ_P0028589 Zfp354a protein_coding protein_coding MGP_CBAJ_T0003256.1 MGP_CBAJ_G0003007.1 mouse_genomes_project 11 119824903 119837162 + Gm11655 antisense antisense MGP_CBAJ_T0027584.1 MGP_CBAJ_G0017731.1 mouse_genomes_project 11 2985734 3001911 - MGP_CBAJ_P0027584 Ccdc117 protein_coding protein_coding MGP_CBAJ_T0033364.1 MGP_CBAJ_G0019157.1 mouse_genomes_project 11 129435263 129455012 - MGP_CBAJ_P0033364 St6galnac2 protein_coding protein_coding MGP_CBAJ_T0033365.1 MGP_CBAJ_G0019157.1 mouse_genomes_project 11 129436035 129439830 - St6galnac2 protein_coding processed_transcript MGP_CBAJ_T0033366.1 MGP_CBAJ_G0019157.1 mouse_genomes_project 11 129437629 129441442 - St6galnac2 protein_coding processed_transcript MGP_CBAJ_T0033367.1 MGP_CBAJ_G0019157.1 mouse_genomes_project 11 129441839 129444972 - St6galnac2 protein_coding processed_transcript MGP_CBAJ_T0033368.1 MGP_CBAJ_G0019157.1 mouse_genomes_project 11 129445071 129446073 - St6galnac2 protein_coding processed_transcript MGP_CBAJ_T0033369.1 MGP_CBAJ_G0019157.1 mouse_genomes_project 11 129450124 129454753 - St6galnac2 protein_coding processed_transcript MGP_CBAJ_T0006287.1 MGP_CBAJ_G0005233.1 mouse_genomes_project 11 132214547 132219894 + Gm26888 lincRNA lincRNA MGP_CBAJ_T0028784.1 MGP_CBAJ_G0018039.1 mouse_genomes_project 11 58008574 58010550 - MGP_CBAJ_P0028784 Il3 protein_coding protein_coding MGP_CBAJ_T0031932.1 MGP_CBAJ_G0018847.1 mouse_genomes_project 11 110129922 110130706 - MGP_CBAJ_P0031932 Krtap4-16 protein_coding protein_coding MGP_CBAJ_T0101553.1 MGP_CBAJ_G0039585.1 mouse_genomes_project 11 91415916 91416793 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0030591.1 MGP_CBAJ_G0018484.1 mouse_genomes_project 11 85025170 85050597 + MGP_CBAJ_P0030591 Flot2 protein_coding protein_coding MGP_CBAJ_T0030592.1 MGP_CBAJ_G0018484.1 mouse_genomes_project 11 85025170 85050597 + MGP_CBAJ_P0030592 Flot2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030593.1 MGP_CBAJ_G0018484.1 mouse_genomes_project 11 85025180 85050594 + MGP_CBAJ_P0030593 Flot2 protein_coding protein_coding MGP_CBAJ_T0030594.1 MGP_CBAJ_G0018484.1 mouse_genomes_project 11 85025223 85050597 + MGP_CBAJ_P0030594 Flot2 protein_coding protein_coding MGP_CBAJ_T0030595.1 MGP_CBAJ_G0018484.1 mouse_genomes_project 11 85027543 85050597 + Flot2 protein_coding processed_transcript MGP_CBAJ_T0012458.1 MGP_CBAJ_G0010570.1 mouse_genomes_project 11 58161728 58162026 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0032208.1 MGP_CBAJ_G0018923.1 mouse_genomes_project 11 112018496 112029933 + MGP_CBAJ_P0032208 Ifi35 protein_coding protein_coding MGP_CBAJ_T0032209.1 MGP_CBAJ_G0018923.1 mouse_genomes_project 11 112018533 112029360 + Ifi35 protein_coding retained_intron MGP_CBAJ_T0032210.1 MGP_CBAJ_G0018923.1 mouse_genomes_project 11 112018659 112029699 + MGP_CBAJ_P0032210 Ifi35 protein_coding nonsense_mediated_decay MGP_CBAJ_T0006081.1 MGP_CBAJ_G0005070.1 mouse_genomes_project 11 1537288 1545135 + Gm11959 lincRNA lincRNA MGP_CBAJ_T0028823.1 MGP_CBAJ_G0018047.1 mouse_genomes_project 11 58714071 58721212 + MGP_CBAJ_P0028823 Gpx3 protein_coding protein_coding MGP_CBAJ_T0028824.1 MGP_CBAJ_G0018047.1 mouse_genomes_project 11 58714390 58722013 + MGP_CBAJ_P0028824 Gpx3 protein_coding protein_coding MGP_CBAJ_T0028825.1 MGP_CBAJ_G0018047.1 mouse_genomes_project 11 58714544 58721170 + MGP_CBAJ_P0028825 Gpx3 protein_coding protein_coding MGP_CBAJ_T0028270.1 MGP_CBAJ_G0017897.1 mouse_genomes_project 11 45173511 45183086 + Atp10b protein_coding processed_transcript MGP_CBAJ_T0028271.1 MGP_CBAJ_G0017897.1 mouse_genomes_project 11 45175222 45294185 + MGP_CBAJ_P0028271 Atp10b protein_coding protein_coding MGP_CBAJ_T0028272.1 MGP_CBAJ_G0017897.1 mouse_genomes_project 11 45179473 45230571 + Atp10b protein_coding processed_transcript MGP_CBAJ_T0012430.1 MGP_CBAJ_G0010542.1 mouse_genomes_project 11 48177244 48177633 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006118.1 MGP_CBAJ_G0005102.1 mouse_genomes_project 11 29908494 29946538 - Gm12092 lincRNA lincRNA MGP_CBAJ_T0028975.1 MGP_CBAJ_G0018113.1 mouse_genomes_project 11 63280793 63294168 + MGP_CBAJ_P0028975 Trim11 protein_coding protein_coding MGP_CBAJ_T0028976.1 MGP_CBAJ_G0018113.1 mouse_genomes_project 11 63280815 63294171 + MGP_CBAJ_P0028976 Trim11 protein_coding protein_coding MGP_CBAJ_T0028977.1 MGP_CBAJ_G0018113.1 mouse_genomes_project 11 63280816 63294170 + MGP_CBAJ_P0028977 Trim11 protein_coding protein_coding MGP_CBAJ_T0031182.1 MGP_CBAJ_G0018636.1 mouse_genomes_project 11 95977946 96003481 + MGP_CBAJ_P0031182 Bzrap1 protein_coding protein_coding MGP_CBAJ_T0031183.1 MGP_CBAJ_G0018636.1 mouse_genomes_project 11 95977992 96003481 + MGP_CBAJ_P0031183 Bzrap1 protein_coding protein_coding MGP_CBAJ_T0031184.1 MGP_CBAJ_G0018636.1 mouse_genomes_project 11 95982158 95983823 + Bzrap1 protein_coding processed_transcript MGP_CBAJ_T0031185.1 MGP_CBAJ_G0018636.1 mouse_genomes_project 11 95993662 95997071 + MGP_CBAJ_P0031185 Bzrap1 protein_coding protein_coding MGP_CBAJ_T0031186.1 MGP_CBAJ_G0018636.1 mouse_genomes_project 11 95994069 96003481 + MGP_CBAJ_P0031186 Bzrap1 protein_coding protein_coding MGP_CBAJ_T0031187.1 MGP_CBAJ_G0018636.1 mouse_genomes_project 11 95994627 96003481 + Bzrap1 protein_coding retained_intron MGP_CBAJ_T0031188.1 MGP_CBAJ_G0018636.1 mouse_genomes_project 11 95996325 96003481 + Bzrap1 protein_coding retained_intron MGP_CBAJ_T0031189.1 MGP_CBAJ_G0018636.1 mouse_genomes_project 11 95996484 95997822 + Bzrap1 protein_coding retained_intron MGP_CBAJ_T0031190.1 MGP_CBAJ_G0018636.1 mouse_genomes_project 11 95997828 96002294 + MGP_CBAJ_P0031190 Bzrap1 protein_coding protein_coding MGP_CBAJ_T0031191.1 MGP_CBAJ_G0018636.1 mouse_genomes_project 11 95999109 96000747 + Bzrap1 protein_coding retained_intron MGP_CBAJ_T0030909.1 MGP_CBAJ_G0018570.1 mouse_genomes_project 11 90992789 91026596 + MGP_CBAJ_P0030909 Ap2b1 protein_coding protein_coding MGP_CBAJ_T0030910.1 MGP_CBAJ_G0018570.1 mouse_genomes_project 11 90996245 91099264 + MGP_CBAJ_P0030910 Ap2b1 protein_coding protein_coding MGP_CBAJ_T0030911.1 MGP_CBAJ_G0018570.1 mouse_genomes_project 11 90996465 91038366 + Ap2b1 protein_coding retained_intron MGP_CBAJ_T0030912.1 MGP_CBAJ_G0018570.1 mouse_genomes_project 11 90996496 91092835 + MGP_CBAJ_P0030912 Ap2b1 protein_coding protein_coding MGP_CBAJ_T0030913.1 MGP_CBAJ_G0018570.1 mouse_genomes_project 11 90996536 91097240 + MGP_CBAJ_P0030913 Ap2b1 protein_coding protein_coding MGP_CBAJ_T0030914.1 MGP_CBAJ_G0018570.1 mouse_genomes_project 11 90996708 91010136 + MGP_CBAJ_P0030914 Ap2b1 protein_coding protein_coding MGP_CBAJ_T0030915.1 MGP_CBAJ_G0018570.1 mouse_genomes_project 11 91002012 91096872 + MGP_CBAJ_P0030915 Ap2b1 protein_coding protein_coding MGP_CBAJ_T0031997.1 MGP_CBAJ_G0018876.1 mouse_genomes_project 11 110834870 110857305 + MGP_CBAJ_P0031997 Klhl10 protein_coding protein_coding MGP_CBAJ_T0031998.1 MGP_CBAJ_G0018876.1 mouse_genomes_project 11 110834880 110838975 + MGP_CBAJ_P0031998 Klhl10 protein_coding protein_coding MGP_CBAJ_T0031289.1 MGP_CBAJ_G0018666.1 mouse_genomes_project 11 99334939 99343461 + MGP_CBAJ_P0031289 Cox11 protein_coding protein_coding MGP_CBAJ_T0031290.1 MGP_CBAJ_G0018666.1 mouse_genomes_project 11 99335268 99343082 + MGP_CBAJ_P0031290 Cox11 protein_coding protein_coding MGP_CBAJ_T0012309.1 MGP_CBAJ_G0010421.1 mouse_genomes_project 11 761831 762669 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0030944.1 MGP_CBAJ_G0018582.1 mouse_genomes_project 11 91382789 91384898 + MGP_CBAJ_P0030944 Ccl4 protein_coding protein_coding MGP_CBAJ_T0032669.1 MGP_CBAJ_G0019015.1 mouse_genomes_project 11 117490462 117490771 + MGP_CBAJ_P0032669 Gm10840 protein_coding protein_coding MGP_CBAJ_T0028027.1 MGP_CBAJ_G0017835.1 mouse_genomes_project 11 29805980 29809263 - MGP_CBAJ_P0028027 Prorsd1 protein_coding protein_coding MGP_CBAJ_T0028028.1 MGP_CBAJ_G0017835.1 mouse_genomes_project 11 29807099 29809265 - MGP_CBAJ_P0028028 Prorsd1 protein_coding protein_coding MGP_CBAJ_T0029413.1 MGP_CBAJ_G0018208.1 mouse_genomes_project 11 72258129 72277699 + MGP_CBAJ_P0029413 Pirt protein_coding protein_coding MGP_CBAJ_T0003093.1 MGP_CBAJ_G0002875.1 mouse_genomes_project 11 57990633 57997566 + Gm12223 antisense antisense MGP_CBAJ_T0016950.1 MGP_CBAJ_G0014920.1 mouse_genomes_project 11 75093191 75095372 + processed_transcript processed_transcript MGP_CBAJ_T0016951.1 MGP_CBAJ_G0014920.1 mouse_genomes_project 11 75093539 75094106 + processed_transcript processed_transcript MGP_CBAJ_T0012479.1 MGP_CBAJ_G0010591.1 mouse_genomes_project 11 65384334 65384817 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0032958.1 MGP_CBAJ_G0019078.1 mouse_genomes_project 11 127043536 127098420 + MGP_CBAJ_P0032958 Ttyh2 protein_coding protein_coding MGP_CBAJ_T0032959.1 MGP_CBAJ_G0019078.1 mouse_genomes_project 11 127043621 127062102 + Ttyh2 protein_coding processed_transcript MGP_CBAJ_T0029190.1 MGP_CBAJ_G0018163.1 mouse_genomes_project 11 65942598 65994987 - MGP_CBAJ_P0029190 Slc47a2 protein_coding protein_coding MGP_CBAJ_T0029191.1 MGP_CBAJ_G0018163.1 mouse_genomes_project 11 65947409 65994977 - MGP_CBAJ_P0029191 Slc47a2 protein_coding protein_coding MGP_CBAJ_T0029192.1 MGP_CBAJ_G0018163.1 mouse_genomes_project 11 65985746 65994711 - Slc47a2 protein_coding processed_transcript MGP_CBAJ_T0027704.1 MGP_CBAJ_G0017759.1 mouse_genomes_project 11 4343747 4365024 + MGP_CBAJ_P0027704 Ramp3 protein_coding protein_coding MGP_CBAJ_T0027705.1 MGP_CBAJ_G0017759.1 mouse_genomes_project 11 4343791 4365021 + Ramp3 protein_coding processed_transcript MGP_CBAJ_T0031615.1 MGP_CBAJ_G0018748.1 mouse_genomes_project 11 106715729 106723424 + MGP_CBAJ_P0031615 Mrpl10 protein_coding protein_coding MGP_CBAJ_T0031616.1 MGP_CBAJ_G0018748.1 mouse_genomes_project 11 106715764 106722731 + MGP_CBAJ_P0031616 Mrpl10 protein_coding protein_coding MGP_CBAJ_T0029520.1 MGP_CBAJ_G0018235.1 mouse_genomes_project 11 74594301 74612127 - MGP_CBAJ_P0029520 Odf4 protein_coding protein_coding MGP_CBAJ_T0029521.1 MGP_CBAJ_G0018235.1 mouse_genomes_project 11 74594302 74612159 - MGP_CBAJ_P0029521 Odf4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029522.1 MGP_CBAJ_G0018235.1 mouse_genomes_project 11 74594429 74611894 - MGP_CBAJ_P0029522 Odf4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029523.1 MGP_CBAJ_G0018235.1 mouse_genomes_project 11 74599028 74612152 - MGP_CBAJ_P0029523 Odf4 protein_coding protein_coding MGP_CBAJ_T0017030.1 MGP_CBAJ_G0014961.1 mouse_genomes_project 11 131476075 131479141 - Gm11748 processed_transcript processed_transcript MGP_CBAJ_T0101565.1 MGP_CBAJ_G0039597.1 mouse_genomes_project 11 110280790 110281207 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0032472.1 MGP_CBAJ_G0018968.1 mouse_genomes_project 11 113717144 113718709 + MGP_CBAJ_P0032472 Fam187a protein_coding protein_coding MGP_CBAJ_T0003156.1 MGP_CBAJ_G0002926.1 mouse_genomes_project 11 82517586 82518112 + Gm16075 antisense antisense MGP_CBAJ_T0101568.1 MGP_CBAJ_G0039600.1 mouse_genomes_project 11 120385236 120386198 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0030041.1 MGP_CBAJ_G0018344.1 mouse_genomes_project 11 77034336 77041958 + MGP_CBAJ_P0030041 Rpain protein_coding protein_coding MGP_CBAJ_T0030042.1 MGP_CBAJ_G0018344.1 mouse_genomes_project 11 77034350 77036043 + MGP_CBAJ_P0030042 Rpain protein_coding nonsense_mediated_decay MGP_CBAJ_T0030043.1 MGP_CBAJ_G0018344.1 mouse_genomes_project 11 77034603 77038287 + Rpain protein_coding retained_intron MGP_CBAJ_T0030044.1 MGP_CBAJ_G0018344.1 mouse_genomes_project 11 77034609 77036473 + Rpain protein_coding retained_intron MGP_CBAJ_T0030045.1 MGP_CBAJ_G0018344.1 mouse_genomes_project 11 77034614 77037615 + Rpain protein_coding retained_intron MGP_CBAJ_T0030046.1 MGP_CBAJ_G0018344.1 mouse_genomes_project 11 77034630 77041812 + MGP_CBAJ_P0030046 Rpain protein_coding nonsense_mediated_decay MGP_CBAJ_T0030047.1 MGP_CBAJ_G0018344.1 mouse_genomes_project 11 77034630 77041812 + MGP_CBAJ_P0030047 Rpain protein_coding protein_coding MGP_CBAJ_T0030048.1 MGP_CBAJ_G0018344.1 mouse_genomes_project 11 77034630 77041812 + MGP_CBAJ_P0030048 Rpain protein_coding protein_coding MGP_CBAJ_T0030049.1 MGP_CBAJ_G0018344.1 mouse_genomes_project 11 77034630 77041812 + MGP_CBAJ_P0030049 Rpain protein_coding protein_coding MGP_CBAJ_T0030050.1 MGP_CBAJ_G0018344.1 mouse_genomes_project 11 77034630 77041812 + MGP_CBAJ_P0030050 Rpain protein_coding protein_coding MGP_CBAJ_T0030051.1 MGP_CBAJ_G0018344.1 mouse_genomes_project 11 77034652 77038554 + Rpain protein_coding retained_intron MGP_CBAJ_T0030052.1 MGP_CBAJ_G0018344.1 mouse_genomes_project 11 77036926 77041930 + Rpain protein_coding retained_intron MGP_CBAJ_T0030053.1 MGP_CBAJ_G0018344.1 mouse_genomes_project 11 77038864 77041926 + Rpain protein_coding retained_intron MGP_CBAJ_T0031913.1 MGP_CBAJ_G0018828.1 mouse_genomes_project 11 109786584 109787177 - MGP_CBAJ_P0031913 Krtap1-4 protein_coding protein_coding MGP_CBAJ_T0029514.1 MGP_CBAJ_G0018234.1 mouse_genomes_project 11 74565147 74569715 + MGP_CBAJ_P0029514 Rpl26 protein_coding protein_coding MGP_CBAJ_T0029515.1 MGP_CBAJ_G0018234.1 mouse_genomes_project 11 74565174 74569691 + MGP_CBAJ_P0029515 Rpl26 protein_coding protein_coding MGP_CBAJ_T0029516.1 MGP_CBAJ_G0018234.1 mouse_genomes_project 11 74565191 74566866 + MGP_CBAJ_P0029516 Rpl26 protein_coding protein_coding MGP_CBAJ_T0029517.1 MGP_CBAJ_G0018234.1 mouse_genomes_project 11 74565199 74569714 + MGP_CBAJ_P0029517 Rpl26 protein_coding protein_coding MGP_CBAJ_T0029518.1 MGP_CBAJ_G0018234.1 mouse_genomes_project 11 74566416 74569714 + Rpl26 protein_coding retained_intron MGP_CBAJ_T0029519.1 MGP_CBAJ_G0018234.1 mouse_genomes_project 11 74566780 74575221 + Rpl26 protein_coding processed_transcript MGP_CBAJ_T0098717.1 MGP_CBAJ_G0036972.1 mouse_genomes_project 11 95894709 95894848 - Gm25968 snRNA snRNA MGP_CBAJ_T0006115.1 MGP_CBAJ_G0005099.1 mouse_genomes_project 11 28893079 28905083 + 2810471M01Rik lincRNA lincRNA MGP_CBAJ_T0027575.1 MGP_CBAJ_G0017728.1 mouse_genomes_project 11 2598261 2679068 - MGP_CBAJ_P0027575 Kremen1 protein_coding protein_coding MGP_CBAJ_T0027576.1 MGP_CBAJ_G0017728.1 mouse_genomes_project 11 2617785 2653155 - MGP_CBAJ_P0027576 Kremen1 protein_coding protein_coding MGP_CBAJ_T0006286.1 MGP_CBAJ_G0005232.1 mouse_genomes_project 11 132184166 132201319 - Gm11755 lincRNA lincRNA MGP_CBAJ_T0028343.1 MGP_CBAJ_G0017916.1 mouse_genomes_project 11 48566254 48586918 - MGP_CBAJ_P0028343 Nipal4 protein_coding protein_coding MGP_CBAJ_T0006188.1 MGP_CBAJ_G0005162.1 mouse_genomes_project 11 81985954 81986566 - Gm12336 lincRNA lincRNA MGP_CBAJ_T0009658.1 MGP_CBAJ_G0007796.1 mouse_genomes_project 11 134788037 134788097 - Mir7236 miRNA miRNA MGP_CBAJ_T0030855.1 MGP_CBAJ_G0018555.1 mouse_genomes_project 11 90321279 90343034 + MGP_CBAJ_P0030855 Lig3 protein_coding protein_coding MGP_CBAJ_T0030856.1 MGP_CBAJ_G0018555.1 mouse_genomes_project 11 90321306 90344446 + MGP_CBAJ_P0030856 Lig3 protein_coding protein_coding MGP_CBAJ_T0030857.1 MGP_CBAJ_G0018555.1 mouse_genomes_project 11 90321313 90336713 + Lig3 protein_coding retained_intron MGP_CBAJ_T0030858.1 MGP_CBAJ_G0018555.1 mouse_genomes_project 11 90321356 90340825 + MGP_CBAJ_P0030858 Lig3 protein_coding protein_coding MGP_CBAJ_T0030859.1 MGP_CBAJ_G0018555.1 mouse_genomes_project 11 90321364 90342197 + MGP_CBAJ_P0030859 Lig3 protein_coding protein_coding MGP_CBAJ_T0030860.1 MGP_CBAJ_G0018555.1 mouse_genomes_project 11 90321364 90342198 + MGP_CBAJ_P0030860 Lig3 protein_coding protein_coding MGP_CBAJ_T0030861.1 MGP_CBAJ_G0018555.1 mouse_genomes_project 11 90321369 90330476 + MGP_CBAJ_P0030861 Lig3 protein_coding protein_coding MGP_CBAJ_T0030862.1 MGP_CBAJ_G0018555.1 mouse_genomes_project 11 90321369 90330477 + MGP_CBAJ_P0030862 Lig3 protein_coding protein_coding MGP_CBAJ_T0030863.1 MGP_CBAJ_G0018555.1 mouse_genomes_project 11 90321374 90344370 + MGP_CBAJ_P0030863 Lig3 protein_coding protein_coding MGP_CBAJ_T0030864.1 MGP_CBAJ_G0018555.1 mouse_genomes_project 11 90335856 90339722 + Lig3 protein_coding retained_intron MGP_CBAJ_T0030865.1 MGP_CBAJ_G0018555.1 mouse_genomes_project 11 90337389 90339739 + Lig3 protein_coding retained_intron MGP_CBAJ_T0030866.1 MGP_CBAJ_G0018555.1 mouse_genomes_project 11 90338520 90344446 + MGP_CBAJ_P0030866 Lig3 protein_coding protein_coding MGP_CBAJ_T0028577.1 MGP_CBAJ_G0017984.1 mouse_genomes_project 11 54003381 54006436 - MGP_CBAJ_P0028577 4933414I15Rik protein_coding protein_coding MGP_CBAJ_T0028578.1 MGP_CBAJ_G0017984.1 mouse_genomes_project 11 54004368 54006412 - 4933414I15Rik protein_coding processed_transcript MGP_CBAJ_T0028583.1 MGP_CBAJ_G0017987.1 mouse_genomes_project 11 54048079 54058788 + MGP_CBAJ_P0028583 Olfr1377 protein_coding protein_coding MGP_CBAJ_T0028584.1 MGP_CBAJ_G0017987.1 mouse_genomes_project 11 54050770 54059095 + MGP_CBAJ_P0028584 Olfr1377 protein_coding protein_coding MGP_CBAJ_T0009618.1 MGP_CBAJ_G0007756.1 mouse_genomes_project 11 106848066 106848122 - Mir7235 miRNA miRNA MGP_CBAJ_T0098721.1 MGP_CBAJ_G0036976.1 mouse_genomes_project 11 104249812 104249937 + Gm22456 snRNA snRNA MGP_CBAJ_T0027475.1 MGP_CBAJ_G0017709.1 mouse_genomes_project 11 1497557 1500802 + Osm protein_coding processed_transcript MGP_CBAJ_T0027476.1 MGP_CBAJ_G0017709.1 mouse_genomes_project 11 1497557 1502164 + MGP_CBAJ_P0027476 Osm protein_coding protein_coding MGP_CBAJ_T0027798.1 MGP_CBAJ_G0017781.1 mouse_genomes_project 11 15550075 15697834 + MGP_CBAJ_P0027798 Egfr protein_coding protein_coding MGP_CBAJ_T0027799.1 MGP_CBAJ_G0017781.1 mouse_genomes_project 11 15550083 15729951 + MGP_CBAJ_P0027799 Egfr protein_coding protein_coding MGP_CBAJ_T0027800.1 MGP_CBAJ_G0017781.1 mouse_genomes_project 11 15550102 15593476 + Egfr protein_coding processed_transcript MGP_CBAJ_T0027801.1 MGP_CBAJ_G0017781.1 mouse_genomes_project 11 15686254 15694268 + MGP_CBAJ_P0027801 Egfr protein_coding protein_coding MGP_CBAJ_T0027802.1 MGP_CBAJ_G0017781.1 mouse_genomes_project 11 15715090 15720711 + Egfr protein_coding processed_transcript MGP_CBAJ_T0031903.1 MGP_CBAJ_G0018820.1 mouse_genomes_project 11 109673360 109688474 - MGP_CBAJ_P0031903 Krt23 protein_coding protein_coding MGP_CBAJ_T0031454.1 MGP_CBAJ_G0018703.1 mouse_genomes_project 11 104472717 104477892 + MGP_CBAJ_P0031454 Dlx3 protein_coding protein_coding MGP_CBAJ_T0032662.1 MGP_CBAJ_G0019013.1 mouse_genomes_project 11 117403373 117482657 + MGP_CBAJ_P0032662 Map3k3 protein_coding protein_coding MGP_CBAJ_T0032663.1 MGP_CBAJ_G0019013.1 mouse_genomes_project 11 117478289 117479456 + Map3k3 protein_coding processed_transcript MGP_CBAJ_T0032664.1 MGP_CBAJ_G0019013.1 mouse_genomes_project 11 117479141 117481350 + Map3k3 protein_coding processed_transcript MGP_CBAJ_T0031342.1 MGP_CBAJ_G0018677.1 mouse_genomes_project 11 103412830 103426208 - MGP_CBAJ_P0031342 Wfikkn2 protein_coding protein_coding MGP_CBAJ_T0031343.1 MGP_CBAJ_G0018677.1 mouse_genomes_project 11 103425947 103429529 - Wfikkn2 protein_coding processed_transcript MGP_CBAJ_T0030737.1 MGP_CBAJ_G0018521.1 mouse_genomes_project 11 86528445 86536698 + Nf1 protein_coding processed_transcript MGP_CBAJ_T0030738.1 MGP_CBAJ_G0018521.1 mouse_genomes_project 11 86528544 86784295 + MGP_CBAJ_P0030738 Nf1 protein_coding protein_coding MGP_CBAJ_T0030739.1 MGP_CBAJ_G0018521.1 mouse_genomes_project 11 86528577 86788093 + MGP_CBAJ_P0030739 Nf1 protein_coding protein_coding MGP_CBAJ_T0030740.1 MGP_CBAJ_G0018521.1 mouse_genomes_project 11 86528639 86633467 + Nf1 protein_coding retained_intron MGP_CBAJ_T0030741.1 MGP_CBAJ_G0018521.1 mouse_genomes_project 11 86528752 86681080 + MGP_CBAJ_P0030741 Nf1 protein_coding unknown_likely_coding MGP_CBAJ_T0030742.1 MGP_CBAJ_G0018521.1 mouse_genomes_project 11 86528752 86680235 + MGP_CBAJ_P0030742 Nf1 protein_coding unknown_likely_coding MGP_CBAJ_T0030743.1 MGP_CBAJ_G0018521.1 mouse_genomes_project 11 86650901 86677636 + Nf1 protein_coding processed_transcript MGP_CBAJ_T0030744.1 MGP_CBAJ_G0018521.1 mouse_genomes_project 11 86650901 86677636 + Nf1 protein_coding processed_transcript MGP_CBAJ_T0030754.1 MGP_CBAJ_G0018521.1 mouse_genomes_project 11 86735550 86783757 + MGP_CBAJ_P0030754 Nf1 protein_coding unknown_likely_coding MGP_CBAJ_T0030755.1 MGP_CBAJ_G0018521.1 mouse_genomes_project 11 86741489 86775476 + Nf1 protein_coding retained_intron MGP_CBAJ_T0030756.1 MGP_CBAJ_G0018521.1 mouse_genomes_project 11 86750894 86785401 + MGP_CBAJ_P0030756 Nf1 protein_coding protein_coding MGP_CBAJ_T0030203.1 MGP_CBAJ_G0018383.1 mouse_genomes_project 11 79513724 79546699 + MGP_CBAJ_P0030203 Trpv1 protein_coding protein_coding MGP_CBAJ_T0030204.1 MGP_CBAJ_G0018383.1 mouse_genomes_project 11 79517675 79545967 + MGP_CBAJ_P0030204 Trpv1 protein_coding protein_coding MGP_CBAJ_T0030205.1 MGP_CBAJ_G0018383.1 mouse_genomes_project 11 79517675 79545967 + MGP_CBAJ_P0030205 Trpv1 protein_coding unknown_likely_coding MGP_CBAJ_T0030206.1 MGP_CBAJ_G0018383.1 mouse_genomes_project 11 79519454 79546702 + MGP_CBAJ_P0030206 Trpv1 protein_coding protein_coding MGP_CBAJ_T0030207.1 MGP_CBAJ_G0018383.1 mouse_genomes_project 11 79519718 79536098 + MGP_CBAJ_P0030207 Trpv1 protein_coding protein_coding MGP_CBAJ_T0030208.1 MGP_CBAJ_G0018383.1 mouse_genomes_project 11 79533584 79535498 + Trpv1 protein_coding processed_transcript MGP_CBAJ_T0032356.1 MGP_CBAJ_G0018951.1 mouse_genomes_project 11 113028358 113050096 - MGP_CBAJ_P0032356 Ubtf protein_coding protein_coding MGP_CBAJ_T0032357.1 MGP_CBAJ_G0018951.1 mouse_genomes_project 11 113028359 113050096 - MGP_CBAJ_P0032357 Ubtf protein_coding protein_coding MGP_CBAJ_T0032358.1 MGP_CBAJ_G0018951.1 mouse_genomes_project 11 113029712 113041674 - MGP_CBAJ_P0032358 Ubtf protein_coding protein_coding MGP_CBAJ_T0032359.1 MGP_CBAJ_G0018951.1 mouse_genomes_project 11 113029712 113040547 - MGP_CBAJ_P0032359 Ubtf protein_coding protein_coding MGP_CBAJ_T0032360.1 MGP_CBAJ_G0018951.1 mouse_genomes_project 11 113029712 113040523 - MGP_CBAJ_P0032360 Ubtf protein_coding protein_coding MGP_CBAJ_T0032361.1 MGP_CBAJ_G0018951.1 mouse_genomes_project 11 113029712 113050096 - MGP_CBAJ_P0032361 Ubtf protein_coding protein_coding MGP_CBAJ_T0032362.1 MGP_CBAJ_G0018951.1 mouse_genomes_project 11 113029781 113041126 - MGP_CBAJ_P0032362 Ubtf protein_coding protein_coding MGP_CBAJ_T0032363.1 MGP_CBAJ_G0018951.1 mouse_genomes_project 11 113030086 113041474 - MGP_CBAJ_P0032363 Ubtf protein_coding protein_coding MGP_CBAJ_T0032364.1 MGP_CBAJ_G0018951.1 mouse_genomes_project 11 113030274 113050769 - MGP_CBAJ_P0032364 Ubtf protein_coding protein_coding MGP_CBAJ_T0032365.1 MGP_CBAJ_G0018951.1 mouse_genomes_project 11 113032318 113033283 - Ubtf protein_coding retained_intron MGP_CBAJ_T0032366.1 MGP_CBAJ_G0018951.1 mouse_genomes_project 11 113032882 113033751 - Ubtf protein_coding retained_intron MGP_CBAJ_T0032367.1 MGP_CBAJ_G0018951.1 mouse_genomes_project 11 113035597 113040518 - MGP_CBAJ_P0032367 Ubtf protein_coding protein_coding MGP_CBAJ_T0032368.1 MGP_CBAJ_G0018951.1 mouse_genomes_project 11 113037451 113040548 - MGP_CBAJ_P0032368 Ubtf protein_coding protein_coding MGP_CBAJ_T0028685.1 MGP_CBAJ_G0018013.1 mouse_genomes_project 11 56767235 56817860 - MGP_CBAJ_P0028685 Hspa4 protein_coding protein_coding MGP_CBAJ_T0028686.1 MGP_CBAJ_G0018013.1 mouse_genomes_project 11 56774053 56781597 - Hspa4 protein_coding retained_intron MGP_CBAJ_T0028687.1 MGP_CBAJ_G0018013.1 mouse_genomes_project 11 56778602 56817814 - Hspa4 protein_coding processed_transcript MGP_CBAJ_T0032080.1 MGP_CBAJ_G0018894.1 mouse_genomes_project 11 111425877 111441171 - MGP_CBAJ_P0032080 Ptrf protein_coding protein_coding MGP_CBAJ_T0032081.1 MGP_CBAJ_G0018894.1 mouse_genomes_project 11 111434690 111440835 - Ptrf protein_coding processed_transcript MGP_CBAJ_T0012542.1 MGP_CBAJ_G0010654.1 mouse_genomes_project 11 92972958 92973485 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012623.1 MGP_CBAJ_G0010735.1 mouse_genomes_project 11 132833763 132834208 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031533.1 MGP_CBAJ_G0018726.1 mouse_genomes_project 11 105735823 105738956 + MGP_CBAJ_P0031533 Hoxb13 protein_coding protein_coding MGP_CBAJ_T0030095.1 MGP_CBAJ_G0018354.1 mouse_genomes_project 11 78164142 78267092 - MGP_CBAJ_P0030095 Pitpnm3 protein_coding protein_coding MGP_CBAJ_T0030096.1 MGP_CBAJ_G0018354.1 mouse_genomes_project 11 78164142 78267035 - MGP_CBAJ_P0030096 Pitpnm3 protein_coding protein_coding MGP_CBAJ_T0030097.1 MGP_CBAJ_G0018354.1 mouse_genomes_project 11 78167723 78168664 - Pitpnm3 protein_coding processed_transcript MGP_CBAJ_T0030098.1 MGP_CBAJ_G0018354.1 mouse_genomes_project 11 78176724 78180641 - Pitpnm3 protein_coding retained_intron MGP_CBAJ_T0030099.1 MGP_CBAJ_G0018354.1 mouse_genomes_project 11 78190144 78267092 - Pitpnm3 protein_coding retained_intron MGP_CBAJ_T0098675.1 MGP_CBAJ_G0036930.1 mouse_genomes_project 11 23404039 23404184 - Gm23827 snRNA snRNA MGP_CBAJ_T0027726.1 MGP_CBAJ_G0017767.1 mouse_genomes_project 11 6953088 6980695 - MGP_CBAJ_P0027726 Sun3 protein_coding protein_coding MGP_CBAJ_T0027727.1 MGP_CBAJ_G0017767.1 mouse_genomes_project 11 6953088 6991524 - MGP_CBAJ_P0027727 Sun3 protein_coding protein_coding MGP_CBAJ_T0012335.1 MGP_CBAJ_G0010447.1 mouse_genomes_project 11 9511240 9512070 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006191.1 MGP_CBAJ_G0005165.1 mouse_genomes_project 11 84364356 84365912 + 2210008F06Rik lincRNA lincRNA MGP_CBAJ_T0097902.1 MGP_CBAJ_G0036175.1 mouse_genomes_project 11 27058532 27058614 + n-R5s68 rRNA rRNA MGP_CBAJ_T0030113.1 MGP_CBAJ_G0018359.1 mouse_genomes_project 11 78386977 78413468 - MGP_CBAJ_P0030113 Slc13a5 protein_coding protein_coding MGP_CBAJ_T0030114.1 MGP_CBAJ_G0018359.1 mouse_genomes_project 11 78407167 78413468 - MGP_CBAJ_P0030114 Slc13a5 protein_coding protein_coding MGP_CBAJ_T0030115.1 MGP_CBAJ_G0018359.1 mouse_genomes_project 11 78408472 78414088 - MGP_CBAJ_P0030115 Slc13a5 protein_coding protein_coding MGP_CBAJ_T0031424.1 MGP_CBAJ_G0018694.1 mouse_genomes_project 11 104031825 104033058 + MGP_CBAJ_P0031424 Cdc34b protein_coding protein_coding MGP_CBAJ_T0031425.1 MGP_CBAJ_G0018694.1 mouse_genomes_project 11 104031825 104033077 + MGP_CBAJ_P0031425 Cdc34b protein_coding protein_coding MGP_CBAJ_T0029905.1 MGP_CBAJ_G0018319.1 mouse_genomes_project 11 76380120 76383483 + Arrb2 protein_coding retained_intron MGP_CBAJ_T0029906.1 MGP_CBAJ_G0018319.1 mouse_genomes_project 11 76380122 76388161 + MGP_CBAJ_P0029906 Arrb2 protein_coding protein_coding MGP_CBAJ_T0029907.1 MGP_CBAJ_G0018319.1 mouse_genomes_project 11 76380122 76388161 + MGP_CBAJ_P0029907 Arrb2 protein_coding protein_coding MGP_CBAJ_T0029908.1 MGP_CBAJ_G0018319.1 mouse_genomes_project 11 76380130 76388315 + MGP_CBAJ_P0029908 Arrb2 protein_coding protein_coding MGP_CBAJ_T0029909.1 MGP_CBAJ_G0018319.1 mouse_genomes_project 11 76380162 76385092 + MGP_CBAJ_P0029909 Arrb2 protein_coding protein_coding MGP_CBAJ_T0029910.1 MGP_CBAJ_G0018319.1 mouse_genomes_project 11 76380167 76386234 + MGP_CBAJ_P0029910 Arrb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029911.1 MGP_CBAJ_G0018319.1 mouse_genomes_project 11 76380216 76388170 + MGP_CBAJ_P0029911 Arrb2 protein_coding protein_coding MGP_CBAJ_T0029912.1 MGP_CBAJ_G0018319.1 mouse_genomes_project 11 76384185 76387720 + Arrb2 protein_coding retained_intron MGP_CBAJ_T0029913.1 MGP_CBAJ_G0018319.1 mouse_genomes_project 11 76384389 76386209 + Arrb2 protein_coding retained_intron MGP_CBAJ_T0029914.1 MGP_CBAJ_G0018319.1 mouse_genomes_project 11 76384778 76387040 + Arrb2 protein_coding retained_intron MGP_CBAJ_T0029915.1 MGP_CBAJ_G0018319.1 mouse_genomes_project 11 76386068 76387715 + Arrb2 protein_coding retained_intron MGP_CBAJ_T0033310.1 MGP_CBAJ_G0019147.1 mouse_genomes_project 11 129138346 129149010 + MGP_CBAJ_P0033310 Ubald2 protein_coding protein_coding MGP_CBAJ_T0033311.1 MGP_CBAJ_G0019147.1 mouse_genomes_project 11 129138636 129148217 + Ubald2 protein_coding processed_transcript MGP_CBAJ_T0027711.1 MGP_CBAJ_G0017763.1 mouse_genomes_project 11 4986349 4994161 - MGP_CBAJ_P0027711 Igfbp3 protein_coding protein_coding MGP_CBAJ_T0027712.1 MGP_CBAJ_G0017763.1 mouse_genomes_project 11 4987949 4994187 - MGP_CBAJ_P0027712 Igfbp3 protein_coding protein_coding MGP_CBAJ_T0029279.1 MGP_CBAJ_G0018177.1 mouse_genomes_project 11 67011688 67032469 + MGP_CBAJ_P0029279 Adora2b protein_coding protein_coding MGP_CBAJ_T0012482.1 MGP_CBAJ_G0010594.1 mouse_genomes_project 11 66073185 66073599 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006119.1 MGP_CBAJ_G0005103.1 mouse_genomes_project 11 32395962 32438196 - D630024D03Rik lincRNA lincRNA MGP_CBAJ_T0006120.1 MGP_CBAJ_G0005103.1 mouse_genomes_project 11 32406798 32438247 - D630024D03Rik lincRNA lincRNA MGP_CBAJ_T0006121.1 MGP_CBAJ_G0005103.1 mouse_genomes_project 11 32431809 32438196 - D630024D03Rik lincRNA lincRNA MGP_CBAJ_T0028736.1 MGP_CBAJ_G0018028.1 mouse_genomes_project 11 57241078 57308317 - MGP_CBAJ_P0028736 Rad50 protein_coding protein_coding MGP_CBAJ_T0028737.1 MGP_CBAJ_G0018028.1 mouse_genomes_project 11 57269120 57308317 - MGP_CBAJ_P0028737 Rad50 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028738.1 MGP_CBAJ_G0018028.1 mouse_genomes_project 11 57276850 57278228 - Rad50 protein_coding processed_transcript MGP_CBAJ_T0028739.1 MGP_CBAJ_G0018028.1 mouse_genomes_project 11 57282909 57308293 - MGP_CBAJ_P0028739 Rad50 protein_coding protein_coding MGP_CBAJ_T0028740.1 MGP_CBAJ_G0018028.1 mouse_genomes_project 11 57292939 57296020 - Rad50 protein_coding processed_transcript MGP_CBAJ_T0099907.1 MGP_CBAJ_G0038162.1 mouse_genomes_project 11 20085894 20086023 - Gm22807 snoRNA snoRNA MGP_CBAJ_T0003272.1 MGP_CBAJ_G0003019.1 mouse_genomes_project 11 128577387 128583043 - Sap30bpos antisense antisense MGP_CBAJ_T0009558.1 MGP_CBAJ_G0007696.1 mouse_genomes_project 11 55429697 55429808 - Gm24157 miRNA miRNA MGP_CBAJ_T0030156.1 MGP_CBAJ_G0018370.1 mouse_genomes_project 11 79022863 79041490 - MGP_CBAJ_P0030156 Cyb5d2 protein_coding protein_coding MGP_CBAJ_T0030157.1 MGP_CBAJ_G0018370.1 mouse_genomes_project 11 79024370 79041336 - MGP_CBAJ_P0030157 Cyb5d2 protein_coding protein_coding MGP_CBAJ_T0030158.1 MGP_CBAJ_G0018370.1 mouse_genomes_project 11 79024509 79041728 - Cyb5d2 protein_coding processed_transcript MGP_CBAJ_T0030159.1 MGP_CBAJ_G0018370.1 mouse_genomes_project 11 79038522 79041475 - Cyb5d2 protein_coding retained_intron MGP_CBAJ_T0028273.1 MGP_CBAJ_G0017898.1 mouse_genomes_project 11 45473037 45482836 - MGP_CBAJ_P0028273 Pttg1 protein_coding protein_coding MGP_CBAJ_T0028274.1 MGP_CBAJ_G0017898.1 mouse_genomes_project 11 45473051 45482559 - MGP_CBAJ_P0028274 Pttg1 protein_coding protein_coding MGP_CBAJ_T0028275.1 MGP_CBAJ_G0017898.1 mouse_genomes_project 11 45473052 45479556 - MGP_CBAJ_P0028275 Pttg1 protein_coding protein_coding MGP_CBAJ_T0028276.1 MGP_CBAJ_G0017898.1 mouse_genomes_project 11 45473056 45482780 - MGP_CBAJ_P0028276 Pttg1 protein_coding protein_coding MGP_CBAJ_T0028277.1 MGP_CBAJ_G0017898.1 mouse_genomes_project 11 45473060 45482795 - MGP_CBAJ_P0028277 Pttg1 protein_coding protein_coding MGP_CBAJ_T0028278.1 MGP_CBAJ_G0017898.1 mouse_genomes_project 11 45473061 45482541 - MGP_CBAJ_P0028278 Pttg1 protein_coding protein_coding MGP_CBAJ_T0028279.1 MGP_CBAJ_G0017898.1 mouse_genomes_project 11 45473065 45482559 - MGP_CBAJ_P0028279 Pttg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028280.1 MGP_CBAJ_G0017898.1 mouse_genomes_project 11 45473818 45482805 - MGP_CBAJ_P0028280 Pttg1 protein_coding protein_coding MGP_CBAJ_T0028281.1 MGP_CBAJ_G0017898.1 mouse_genomes_project 11 45479484 45482696 - Pttg1 protein_coding processed_transcript MGP_CBAJ_T0028282.1 MGP_CBAJ_G0017898.1 mouse_genomes_project 11 45481199 45482791 - Pttg1 protein_coding retained_intron MGP_CBAJ_T0000806.1 MGP_CBAJ_G0000742.1 mouse_genomes_project 11 17322722 17323318 + TEC TEC MGP_CBAJ_T0028114.1 MGP_CBAJ_G0017855.1 mouse_genomes_project 11 32906686 32910494 + MGP_CBAJ_P0028114 Snrnp25 protein_coding protein_coding MGP_CBAJ_T0028115.1 MGP_CBAJ_G0017855.1 mouse_genomes_project 11 32906717 32909918 + MGP_CBAJ_P0028115 Snrnp25 protein_coding protein_coding MGP_CBAJ_T0028116.1 MGP_CBAJ_G0017855.1 mouse_genomes_project 11 32906729 32909044 + Snrnp25 protein_coding processed_transcript MGP_CBAJ_T0028117.1 MGP_CBAJ_G0017855.1 mouse_genomes_project 11 32906759 32910383 + MGP_CBAJ_P0028117 Snrnp25 protein_coding protein_coding MGP_CBAJ_T0028118.1 MGP_CBAJ_G0017855.1 mouse_genomes_project 11 32908033 32910494 + Snrnp25 protein_coding retained_intron MGP_CBAJ_T0032702.1 MGP_CBAJ_G0019024.1 mouse_genomes_project 11 117657210 117660634 - MGP_CBAJ_P0032702 Cd79b protein_coding protein_coding MGP_CBAJ_T0032703.1 MGP_CBAJ_G0019024.1 mouse_genomes_project 11 117657213 117660401 - MGP_CBAJ_P0032703 Cd79b protein_coding protein_coding MGP_CBAJ_T0032836.1 MGP_CBAJ_G0019049.1 mouse_genomes_project 11 120871631 120876726 - MGP_CBAJ_P0032836 E030025P04Rik protein_coding protein_coding MGP_CBAJ_T0027736.1 MGP_CBAJ_G0017770.1 mouse_genomes_project 11 7160523 7194840 + Abca13 protein_coding processed_transcript MGP_CBAJ_T0027737.1 MGP_CBAJ_G0017770.1 mouse_genomes_project 11 7160523 7721087 + MGP_CBAJ_P0027737 Abca13 protein_coding protein_coding MGP_CBAJ_T0027738.1 MGP_CBAJ_G0017770.1 mouse_genomes_project 11 7162033 7239399 + MGP_CBAJ_P0027738 Abca13 protein_coding protein_coding MGP_CBAJ_T0027739.1 MGP_CBAJ_G0017770.1 mouse_genomes_project 11 7230950 7720206 + MGP_CBAJ_P0027739 Abca13 protein_coding unknown_likely_coding MGP_CBAJ_T0027807.1 MGP_CBAJ_G0017784.1 mouse_genomes_project 11 15869852 15873270 + MGP_CBAJ_P0027807 Cnrip1 protein_coding protein_coding MGP_CBAJ_T0027808.1 MGP_CBAJ_G0017784.1 mouse_genomes_project 11 15870069 15872506 + Cnrip1 protein_coding retained_intron MGP_CBAJ_T0027809.1 MGP_CBAJ_G0017784.1 mouse_genomes_project 11 15870084 15902697 + MGP_CBAJ_P0027809 Cnrip1 protein_coding protein_coding MGP_CBAJ_T0027464.1 MGP_CBAJ_G0017706.1 mouse_genomes_project 11 1414861 1437868 + MGP_CBAJ_P0027464 Sf3a1 protein_coding protein_coding MGP_CBAJ_T0027465.1 MGP_CBAJ_G0017706.1 mouse_genomes_project 11 1414866 1428437 + Sf3a1 protein_coding processed_transcript MGP_CBAJ_T0027466.1 MGP_CBAJ_G0017706.1 mouse_genomes_project 11 1414866 1426425 + Sf3a1 protein_coding retained_intron MGP_CBAJ_T0027467.1 MGP_CBAJ_G0017706.1 mouse_genomes_project 11 1432874 1434746 + Sf3a1 protein_coding retained_intron MGP_CBAJ_T0003240.1 MGP_CBAJ_G0002993.1 mouse_genomes_project 11 115651607 115652596 - Gm11665 antisense antisense MGP_CBAJ_T0009648.1 MGP_CBAJ_G0007786.1 mouse_genomes_project 11 130981885 130981966 + Mir6933 miRNA miRNA MGP_CBAJ_T0012326.1 MGP_CBAJ_G0010438.1 mouse_genomes_project 11 4417087 4417665 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099961.1 MGP_CBAJ_G0038216.1 mouse_genomes_project 11 117873799 117873869 + Snord104 snoRNA snoRNA MGP_CBAJ_T0028331.1 MGP_CBAJ_G0017912.1 mouse_genomes_project 11 48309156 48325821 - MGP_CBAJ_P0028331 Lsm11 protein_coding protein_coding MGP_CBAJ_T0028332.1 MGP_CBAJ_G0017912.1 mouse_genomes_project 11 48311967 48325821 - MGP_CBAJ_P0028332 Lsm11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012615.1 MGP_CBAJ_G0010727.1 mouse_genomes_project 11 128249485 128249554 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012588.1 MGP_CBAJ_G0010700.1 mouse_genomes_project 11 115575436 115575848 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0028560.1 MGP_CBAJ_G0017979.1 mouse_genomes_project 11 53887080 53894877 - MGP_CBAJ_P0028560 Zfp879 protein_coding protein_coding MGP_CBAJ_T0033471.1 MGP_CBAJ_G0019180.1 mouse_genomes_project 11 130962474 131007254 + MGP_CBAJ_P0033471 Pgs1 protein_coding protein_coding MGP_CBAJ_T0033472.1 MGP_CBAJ_G0019180.1 mouse_genomes_project 11 130963067 131007254 + MGP_CBAJ_P0033472 Pgs1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033473.1 MGP_CBAJ_G0019180.1 mouse_genomes_project 11 130980410 131007168 + MGP_CBAJ_P0033473 Pgs1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033474.1 MGP_CBAJ_G0019180.1 mouse_genomes_project 11 130991964 131007254 + Pgs1 protein_coding retained_intron MGP_CBAJ_T0033804.1 MGP_CBAJ_G0019243.1 mouse_genomes_project 11 134020638 134027827 + MGP_CBAJ_P0033804 Lrrc45 protein_coding protein_coding MGP_CBAJ_T0033805.1 MGP_CBAJ_G0019243.1 mouse_genomes_project 11 134020664 134027822 + MGP_CBAJ_P0033805 Lrrc45 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033806.1 MGP_CBAJ_G0019243.1 mouse_genomes_project 11 134020691 134022268 + MGP_CBAJ_P0033806 Lrrc45 protein_coding protein_coding MGP_CBAJ_T0033807.1 MGP_CBAJ_G0019243.1 mouse_genomes_project 11 134024228 134026676 + Lrrc45 protein_coding retained_intron MGP_CBAJ_T0033808.1 MGP_CBAJ_G0019243.1 mouse_genomes_project 11 134026434 134027611 + Lrrc45 protein_coding retained_intron MGP_CBAJ_T0012578.1 MGP_CBAJ_G0010690.1 mouse_genomes_project 11 111900812 111901049 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0027708.1 MGP_CBAJ_G0017761.1 mouse_genomes_project 11 4841674 4958994 + MGP_CBAJ_P0027708 Adcy1 protein_coding protein_coding MGP_CBAJ_T0027709.1 MGP_CBAJ_G0017761.1 mouse_genomes_project 11 4940369 4953367 + Adcy1 protein_coding processed_transcript MGP_CBAJ_T0027754.1 MGP_CBAJ_G0017775.1 mouse_genomes_project 11 10060715 10090079 - Fignl1 protein_coding processed_transcript MGP_CBAJ_T0027755.1 MGP_CBAJ_G0017775.1 mouse_genomes_project 11 10060727 10080971 - Fignl1 protein_coding processed_transcript MGP_CBAJ_T0027756.1 MGP_CBAJ_G0017775.1 mouse_genomes_project 11 10079797 10090116 - MGP_CBAJ_P0027756 Fignl1 protein_coding protein_coding MGP_CBAJ_T0027757.1 MGP_CBAJ_G0017775.1 mouse_genomes_project 11 10079797 10090116 - MGP_CBAJ_P0027757 Fignl1 protein_coding protein_coding MGP_CBAJ_T0027758.1 MGP_CBAJ_G0017775.1 mouse_genomes_project 11 10079797 10090113 - MGP_CBAJ_P0027758 Fignl1 protein_coding protein_coding MGP_CBAJ_T0027759.1 MGP_CBAJ_G0017775.1 mouse_genomes_project 11 10080061 10090086 - MGP_CBAJ_P0027759 Fignl1 protein_coding protein_coding MGP_CBAJ_T0027760.1 MGP_CBAJ_G0017775.1 mouse_genomes_project 11 10082206 10090102 - MGP_CBAJ_P0027760 Fignl1 protein_coding protein_coding MGP_CBAJ_T0027706.1 MGP_CBAJ_G0017760.1 mouse_genomes_project 11 4568339 4570368 - Gm11983 protein_coding translated_processed_pseudogene MGP_CBAJ_T0027707.1 MGP_CBAJ_G0017760.1 mouse_genomes_project 11 4569521 4569839 - MGP_CBAJ_P0027707 Gm11983 protein_coding protein_coding MGP_CBAJ_T0029340.1 MGP_CBAJ_G0018188.1 mouse_genomes_project 11 67590542 67590941 + MGP_CBAJ_P0029340 Gm10428 protein_coding protein_coding MGP_CBAJ_T0009533.1 MGP_CBAJ_G0007671.1 mouse_genomes_project 11 4023669 4023733 + Mir7651 miRNA miRNA MGP_CBAJ_T0031387.1 MGP_CBAJ_G0018684.1 mouse_genomes_project 11 103731531 103741958 - MGP_CBAJ_P0031387 Epn3 protein_coding protein_coding MGP_CBAJ_T0031388.1 MGP_CBAJ_G0018684.1 mouse_genomes_project 11 103733051 103741893 - Epn3 protein_coding processed_transcript MGP_CBAJ_T0031389.1 MGP_CBAJ_G0018684.1 mouse_genomes_project 11 103733089 103741845 - MGP_CBAJ_P0031389 Epn3 protein_coding unknown_likely_coding MGP_CBAJ_T0031390.1 MGP_CBAJ_G0018684.1 mouse_genomes_project 11 103737940 103740192 - Epn3 protein_coding processed_transcript MGP_CBAJ_T0031391.1 MGP_CBAJ_G0018684.1 mouse_genomes_project 11 103738304 103741104 - Epn3 protein_coding processed_transcript MGP_CBAJ_T0012478.1 MGP_CBAJ_G0010590.1 mouse_genomes_project 11 65381973 65383357 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006186.1 MGP_CBAJ_G0005161.1 mouse_genomes_project 11 79274425 79277403 - 4732414G09Rik lincRNA lincRNA MGP_CBAJ_T0006187.1 MGP_CBAJ_G0005161.1 mouse_genomes_project 11 79274425 79277366 - 4732414G09Rik lincRNA lincRNA MGP_CBAJ_T0098181.1 MGP_CBAJ_G0036454.1 mouse_genomes_project 11 75103248 75103392 - Gm22442 scaRNA scaRNA MGP_CBAJ_T0003281.1 MGP_CBAJ_G0003027.1 mouse_genomes_project 11 131111438 131114863 + Gm11738 antisense antisense MGP_CBAJ_T0101028.1 MGP_CBAJ_G0039262.1 mouse_genomes_project 11 119084601 119084976 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0011188.1 MGP_CBAJ_G0009326.1 mouse_genomes_project 11 111220142 111220430 - Gm24358 misc_RNA misc_RNA MGP_CBAJ_T0009653.1 MGP_CBAJ_G0007791.1 mouse_genomes_project 11 133227965 133228052 + Mir3065 miRNA miRNA MGP_CBAJ_T0030026.1 MGP_CBAJ_G0018343.1 mouse_genomes_project 11 77007481 77034078 - Nup88 protein_coding retained_intron MGP_CBAJ_T0030027.1 MGP_CBAJ_G0018343.1 mouse_genomes_project 11 77007495 77034092 - MGP_CBAJ_P0030027 Nup88 protein_coding protein_coding MGP_CBAJ_T0030028.1 MGP_CBAJ_G0018343.1 mouse_genomes_project 11 77007500 77010784 - Nup88 protein_coding retained_intron MGP_CBAJ_T0030029.1 MGP_CBAJ_G0018343.1 mouse_genomes_project 11 77007505 77034081 - MGP_CBAJ_P0030029 Nup88 protein_coding protein_coding MGP_CBAJ_T0030030.1 MGP_CBAJ_G0018343.1 mouse_genomes_project 11 77007525 77034073 - MGP_CBAJ_P0030030 Nup88 protein_coding protein_coding MGP_CBAJ_T0030031.1 MGP_CBAJ_G0018343.1 mouse_genomes_project 11 77007599 77033999 - MGP_CBAJ_P0030031 Nup88 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030032.1 MGP_CBAJ_G0018343.1 mouse_genomes_project 11 77008300 77009522 - Nup88 protein_coding retained_intron MGP_CBAJ_T0030033.1 MGP_CBAJ_G0018343.1 mouse_genomes_project 11 77008359 77008910 - Nup88 protein_coding retained_intron MGP_CBAJ_T0030034.1 MGP_CBAJ_G0018343.1 mouse_genomes_project 11 77008401 77009159 - Nup88 protein_coding retained_intron MGP_CBAJ_T0030035.1 MGP_CBAJ_G0018343.1 mouse_genomes_project 11 77008834 77009456 - Nup88 protein_coding retained_intron MGP_CBAJ_T0030036.1 MGP_CBAJ_G0018343.1 mouse_genomes_project 11 77009104 77013236 - Nup88 protein_coding retained_intron MGP_CBAJ_T0030037.1 MGP_CBAJ_G0018343.1 mouse_genomes_project 11 77013985 77034080 - Nup88 protein_coding retained_intron MGP_CBAJ_T0030038.1 MGP_CBAJ_G0018343.1 mouse_genomes_project 11 77018925 77020927 - Nup88 protein_coding retained_intron MGP_CBAJ_T0030039.1 MGP_CBAJ_G0018343.1 mouse_genomes_project 11 77019623 77021378 - Nup88 protein_coding retained_intron MGP_CBAJ_T0030040.1 MGP_CBAJ_G0018343.1 mouse_genomes_project 11 77020664 77026227 - Nup88 protein_coding retained_intron MGP_CBAJ_T0009561.1 MGP_CBAJ_G0007699.1 mouse_genomes_project 11 57387072 57387130 - Mir7671 miRNA miRNA MGP_CBAJ_T0101569.1 MGP_CBAJ_G0039601.1 mouse_genomes_project 11 129506144 129515272 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0032126.1 MGP_CBAJ_G0018905.1 mouse_genomes_project 11 111679349 111687064 + Cntnap1 protein_coding processed_transcript MGP_CBAJ_T0032128.1 MGP_CBAJ_G0018905.1 mouse_genomes_project 11 111684832 111699525 + MGP_CBAJ_P0032128 Cntnap1 protein_coding protein_coding MGP_CBAJ_T0027896.1 MGP_CBAJ_G0017808.1 mouse_genomes_project 11 22344736 22504733 - MGP_CBAJ_P0027896 Gm28048 protein_coding protein_coding MGP_CBAJ_T0012348.1 MGP_CBAJ_G0010460.1 mouse_genomes_project 11 15835630 15839859 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016884.1 MGP_CBAJ_G0014885.1 mouse_genomes_project 11 395081 406774 + Gm11944 processed_transcript processed_transcript MGP_CBAJ_T0029158.1 MGP_CBAJ_G0018157.1 mouse_genomes_project 11 65521955 65546230 + MGP_CBAJ_P0029158 Map2k3 protein_coding protein_coding MGP_CBAJ_T0029159.1 MGP_CBAJ_G0018157.1 mouse_genomes_project 11 65521976 65541037 + Map2k3 protein_coding retained_intron MGP_CBAJ_T0029160.1 MGP_CBAJ_G0018157.1 mouse_genomes_project 11 65521976 65535573 + Map2k3 protein_coding retained_intron MGP_CBAJ_T0029161.1 MGP_CBAJ_G0018157.1 mouse_genomes_project 11 65521988 65546213 + MGP_CBAJ_P0029161 Map2k3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029162.1 MGP_CBAJ_G0018157.1 mouse_genomes_project 11 65535336 65540217 + Map2k3 protein_coding processed_transcript MGP_CBAJ_T0029163.1 MGP_CBAJ_G0018157.1 mouse_genomes_project 11 65544078 65545238 + Map2k3 protein_coding retained_intron MGP_CBAJ_T0029152.1 MGP_CBAJ_G0018154.1 mouse_genomes_project 11 65398357 65426294 + MGP_CBAJ_P0029152 Dhrs7b protein_coding protein_coding MGP_CBAJ_T0099948.1 MGP_CBAJ_G0038203.1 mouse_genomes_project 11 87139150 87139282 - Gm24454 snoRNA snoRNA MGP_CBAJ_T0006145.1 MGP_CBAJ_G0005126.1 mouse_genomes_project 11 49098806 49114185 - lincRNA lincRNA MGP_CBAJ_T0029859.1 MGP_CBAJ_G0018307.1 mouse_genomes_project 11 76038909 76042856 + protein_coding processed_transcript MGP_CBAJ_T0030988.1 MGP_CBAJ_G0018594.1 mouse_genomes_project 11 92225277 92324952 - MGP_CBAJ_P0030988 Aatf protein_coding protein_coding MGP_CBAJ_T0030989.1 MGP_CBAJ_G0018594.1 mouse_genomes_project 11 92225305 92296667 - Aatf protein_coding processed_transcript MGP_CBAJ_T0030990.1 MGP_CBAJ_G0018594.1 mouse_genomes_project 11 92225378 92324812 - MGP_CBAJ_P0030990 Aatf protein_coding unknown_likely_coding MGP_CBAJ_T0030991.1 MGP_CBAJ_G0018594.1 mouse_genomes_project 11 92245039 92252094 - Aatf protein_coding retained_intron MGP_CBAJ_T0030992.1 MGP_CBAJ_G0018594.1 mouse_genomes_project 11 92269420 92324952 - Aatf protein_coding retained_intron MGP_CBAJ_T0028239.1 MGP_CBAJ_G0017889.1 mouse_genomes_project 11 42457136 42494203 - MGP_CBAJ_P0028239 Hmmr protein_coding protein_coding MGP_CBAJ_T0028240.1 MGP_CBAJ_G0017889.1 mouse_genomes_project 11 42476613 42494197 - Hmmr protein_coding processed_transcript MGP_CBAJ_T0028241.1 MGP_CBAJ_G0017889.1 mouse_genomes_project 11 42478576 42494197 - Hmmr protein_coding processed_transcript MGP_CBAJ_T0028242.1 MGP_CBAJ_G0017889.1 mouse_genomes_project 11 42480447 42494172 - Hmmr protein_coding processed_transcript MGP_CBAJ_T0098733.1 MGP_CBAJ_G0036988.1 mouse_genomes_project 11 117599862 117599970 + Gm23645 snRNA snRNA MGP_CBAJ_T0028920.1 MGP_CBAJ_G0018077.1 mouse_genomes_project 11 62566031 62588832 + MGP_CBAJ_P0028920 Sh3bp5l protein_coding protein_coding MGP_CBAJ_T0028921.1 MGP_CBAJ_G0018077.1 mouse_genomes_project 11 62566057 62588829 + MGP_CBAJ_P0028921 Sh3bp5l protein_coding protein_coding MGP_CBAJ_T0028922.1 MGP_CBAJ_G0018077.1 mouse_genomes_project 11 62566350 62566817 + Sh3bp5l protein_coding processed_transcript MGP_CBAJ_T0028923.1 MGP_CBAJ_G0018077.1 mouse_genomes_project 11 62566582 62588824 + Sh3bp5l protein_coding processed_transcript MGP_CBAJ_T0028924.1 MGP_CBAJ_G0018077.1 mouse_genomes_project 11 62586414 62588054 + Sh3bp5l protein_coding processed_transcript MGP_CBAJ_T0028821.1 MGP_CBAJ_G0018046.1 mouse_genomes_project 11 58670367 58674479 + MGP_CBAJ_P0028821 Hint1 protein_coding protein_coding MGP_CBAJ_T0028822.1 MGP_CBAJ_G0018046.1 mouse_genomes_project 11 58670465 58674285 + MGP_CBAJ_P0028822 Hint1 protein_coding protein_coding MGP_CBAJ_T0032770.1 MGP_CBAJ_G0019037.1 mouse_genomes_project 11 118502163 118617055 - MGP_CBAJ_P0032770 Bptf protein_coding protein_coding MGP_CBAJ_T0032771.1 MGP_CBAJ_G0019037.1 mouse_genomes_project 11 118502165 118619995 - MGP_CBAJ_P0032771 Bptf protein_coding protein_coding MGP_CBAJ_T0032772.1 MGP_CBAJ_G0019037.1 mouse_genomes_project 11 118502165 118619995 - MGP_CBAJ_P0032772 Bptf protein_coding protein_coding MGP_CBAJ_T0032773.1 MGP_CBAJ_G0019037.1 mouse_genomes_project 11 118504586 118515020 - Bptf protein_coding processed_transcript MGP_CBAJ_T0032774.1 MGP_CBAJ_G0019037.1 mouse_genomes_project 11 118507114 118616729 - MGP_CBAJ_P0032774 Bptf protein_coding unknown_likely_coding MGP_CBAJ_T0032775.1 MGP_CBAJ_G0019037.1 mouse_genomes_project 11 118514354 118518602 - Bptf protein_coding processed_transcript MGP_CBAJ_T0032776.1 MGP_CBAJ_G0019037.1 mouse_genomes_project 11 118517992 118525106 - MGP_CBAJ_P0032776 Bptf protein_coding protein_coding MGP_CBAJ_T0032777.1 MGP_CBAJ_G0019037.1 mouse_genomes_project 11 118532701 118539275 - MGP_CBAJ_P0032777 Bptf protein_coding protein_coding MGP_CBAJ_T0031943.1 MGP_CBAJ_G0018858.1 mouse_genomes_project 11 110430978 110435560 - Krt32 protein_coding processed_transcript MGP_CBAJ_T0031944.1 MGP_CBAJ_G0018858.1 mouse_genomes_project 11 110430987 110438327 - MGP_CBAJ_P0031944 Krt32 protein_coding protein_coding MGP_CBAJ_T0033402.1 MGP_CBAJ_G0019164.1 mouse_genomes_project 11 129685636 129763356 + MGP_CBAJ_P0033402 Mgat5b protein_coding protein_coding MGP_CBAJ_T0033403.1 MGP_CBAJ_G0019164.1 mouse_genomes_project 11 129717287 129744208 + Mgat5b protein_coding processed_transcript MGP_CBAJ_T0033404.1 MGP_CBAJ_G0019164.1 mouse_genomes_project 11 129736687 129750921 + MGP_CBAJ_P0033404 Mgat5b protein_coding protein_coding MGP_CBAJ_T0033405.1 MGP_CBAJ_G0019164.1 mouse_genomes_project 11 129742973 129763348 + Mgat5b protein_coding retained_intron MGP_CBAJ_T0028254.1 MGP_CBAJ_G0017893.1 mouse_genomes_project 11 43997763 44057434 - MGP_CBAJ_P0028254 Gabra1 protein_coding protein_coding MGP_CBAJ_T0028255.1 MGP_CBAJ_G0017893.1 mouse_genomes_project 11 43997763 44056667 - MGP_CBAJ_P0028255 Gabra1 protein_coding protein_coding MGP_CBAJ_T0028256.1 MGP_CBAJ_G0017893.1 mouse_genomes_project 11 44002378 44052355 - MGP_CBAJ_P0028256 Gabra1 protein_coding protein_coding MGP_CBAJ_T0028257.1 MGP_CBAJ_G0017893.1 mouse_genomes_project 11 44023991 44052468 - MGP_CBAJ_P0028257 Gabra1 protein_coding protein_coding MGP_CBAJ_T0028258.1 MGP_CBAJ_G0017893.1 mouse_genomes_project 11 44047289 44057434 - MGP_CBAJ_P0028258 Gabra1 protein_coding protein_coding MGP_CBAJ_T0028259.1 MGP_CBAJ_G0017893.1 mouse_genomes_project 11 44048595 44056964 - Gabra1 protein_coding processed_transcript MGP_CBAJ_T0028260.1 MGP_CBAJ_G0017893.1 mouse_genomes_project 11 44052071 44057414 - MGP_CBAJ_P0028260 Gabra1 protein_coding protein_coding MGP_CBAJ_T0003236.1 MGP_CBAJ_G0002989.1 mouse_genomes_project 11 114282527 114288112 + Arhgap27os3 antisense antisense MGP_CBAJ_T0012531.1 MGP_CBAJ_G0010643.1 mouse_genomes_project 11 86564656 86565612 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031543.1 MGP_CBAJ_G0018731.1 mouse_genomes_project 11 105859397 105862181 + Hoxb5 protein_coding retained_intron MGP_CBAJ_T0031544.1 MGP_CBAJ_G0018731.1 mouse_genomes_project 11 105859573 105862180 + MGP_CBAJ_P0031544 Hoxb5 protein_coding protein_coding MGP_CBAJ_T0012366.1 MGP_CBAJ_G0010478.1 mouse_genomes_project 11 20483080 20483617 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031935.1 MGP_CBAJ_G0018850.1 mouse_genomes_project 11 110271789 110272866 + MGP_CBAJ_P0031935 Krtap9-5 protein_coding protein_coding MGP_CBAJ_T0033406.1 MGP_CBAJ_G0019165.1 mouse_genomes_project 11 129929948 129966883 + Sec14l1 protein_coding retained_intron MGP_CBAJ_T0033407.1 MGP_CBAJ_G0019165.1 mouse_genomes_project 11 129929952 129973907 + MGP_CBAJ_P0033407 Sec14l1 protein_coding protein_coding MGP_CBAJ_T0033408.1 MGP_CBAJ_G0019165.1 mouse_genomes_project 11 129930018 129972201 + MGP_CBAJ_P0033408 Sec14l1 protein_coding protein_coding MGP_CBAJ_T0033409.1 MGP_CBAJ_G0019165.1 mouse_genomes_project 11 129930018 129973910 + MGP_CBAJ_P0033409 Sec14l1 protein_coding protein_coding MGP_CBAJ_T0033410.1 MGP_CBAJ_G0019165.1 mouse_genomes_project 11 129930032 129943559 + Sec14l1 protein_coding processed_transcript MGP_CBAJ_T0033411.1 MGP_CBAJ_G0019165.1 mouse_genomes_project 11 129969713 129971122 + Sec14l1 protein_coding retained_intron MGP_CBAJ_T0030934.1 MGP_CBAJ_G0018576.1 mouse_genomes_project 11 91217562 91227991 - MGP_CBAJ_P0030934 Heatr9 protein_coding protein_coding MGP_CBAJ_T0098677.1 MGP_CBAJ_G0036932.1 mouse_genomes_project 11 26233114 26233278 - Gm22868 snRNA snRNA MGP_CBAJ_T0098718.1 MGP_CBAJ_G0036973.1 mouse_genomes_project 11 97402536 97402643 + Gm23507 snRNA snRNA MGP_CBAJ_T0031614.1 MGP_CBAJ_G0018747.1 mouse_genomes_project 11 106704920 106715605 - MGP_CBAJ_P0031614 Lrrc46 protein_coding protein_coding MGP_CBAJ_T0098696.1 MGP_CBAJ_G0036951.1 mouse_genomes_project 11 77062528 77062634 - Gm22297 snRNA snRNA MGP_CBAJ_T0030630.1 MGP_CBAJ_G0018492.1 mouse_genomes_project 11 85212536 85226350 + MGP_CBAJ_P0030630 Proca1 protein_coding protein_coding MGP_CBAJ_T0030631.1 MGP_CBAJ_G0018492.1 mouse_genomes_project 11 85213848 85226313 + MGP_CBAJ_P0030631 Proca1 protein_coding protein_coding MGP_CBAJ_T0030632.1 MGP_CBAJ_G0018492.1 mouse_genomes_project 11 85213878 85226609 + MGP_CBAJ_P0030632 Proca1 protein_coding protein_coding MGP_CBAJ_T0030633.1 MGP_CBAJ_G0018492.1 mouse_genomes_project 11 85225272 85225937 + Proca1 protein_coding processed_transcript MGP_CBAJ_T0028936.1 MGP_CBAJ_G0018087.1 mouse_genomes_project 11 62826041 62833559 - MGP_CBAJ_P0028936 Olfr328 protein_coding protein_coding MGP_CBAJ_T0028937.1 MGP_CBAJ_G0018087.1 mouse_genomes_project 11 62826041 62826974 - MGP_CBAJ_P0028937 Olfr328 protein_coding protein_coding MGP_CBAJ_T0012339.1 MGP_CBAJ_G0010451.1 mouse_genomes_project 11 13010513 13010916 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0031937.1 MGP_CBAJ_G0018852.1 mouse_genomes_project 11 110316536 110318424 - MGP_CBAJ_P0031937 Krtap16-1 protein_coding protein_coding MGP_CBAJ_T0009616.1 MGP_CBAJ_G0007754.1 mouse_genomes_project 11 106484116 106484189 + Mir152 miRNA miRNA MGP_CBAJ_T0030125.1 MGP_CBAJ_G0018363.1 mouse_genomes_project 11 78553584 78583946 - MGP_CBAJ_P0030125 Smtnl2 protein_coding protein_coding MGP_CBAJ_T0030126.1 MGP_CBAJ_G0018363.1 mouse_genomes_project 11 78567725 78570960 - Smtnl2 protein_coding processed_transcript MGP_CBAJ_T0030127.1 MGP_CBAJ_G0018363.1 mouse_genomes_project 11 78569337 78570593 - Smtnl2 protein_coding processed_transcript MGP_CBAJ_T0030144.1 MGP_CBAJ_G0018367.1 mouse_genomes_project 11 78687472 78694997 - Spns3 protein_coding processed_transcript MGP_CBAJ_T0030145.1 MGP_CBAJ_G0018367.1 mouse_genomes_project 11 78690708 78747837 - MGP_CBAJ_P0030145 Spns3 protein_coding protein_coding MGP_CBAJ_T0030146.1 MGP_CBAJ_G0018367.1 mouse_genomes_project 11 78690713 78747632 - MGP_CBAJ_P0030146 Spns3 protein_coding protein_coding MGP_CBAJ_T0031002.1 MGP_CBAJ_G0018598.1 mouse_genomes_project 11 92676235 92720796 - MGP_CBAJ_P0031002 Ggnbp2 protein_coding protein_coding MGP_CBAJ_T0031003.1 MGP_CBAJ_G0018598.1 mouse_genomes_project 11 92676235 92720768 - MGP_CBAJ_P0031003 Ggnbp2 protein_coding protein_coding MGP_CBAJ_T0031004.1 MGP_CBAJ_G0018598.1 mouse_genomes_project 11 92676235 92720717 - MGP_CBAJ_P0031004 Ggnbp2 protein_coding protein_coding MGP_CBAJ_T0031005.1 MGP_CBAJ_G0018598.1 mouse_genomes_project 11 92676680 92717752 - MGP_CBAJ_P0031005 Ggnbp2 protein_coding protein_coding MGP_CBAJ_T0031006.1 MGP_CBAJ_G0018598.1 mouse_genomes_project 11 92676735 92720625 - MGP_CBAJ_P0031006 Ggnbp2 protein_coding protein_coding MGP_CBAJ_T0031007.1 MGP_CBAJ_G0018598.1 mouse_genomes_project 11 92676846 92720719 - MGP_CBAJ_P0031007 Ggnbp2 protein_coding protein_coding MGP_CBAJ_T0031008.1 MGP_CBAJ_G0018598.1 mouse_genomes_project 11 92678010 92682514 - MGP_CBAJ_P0031008 Ggnbp2 protein_coding protein_coding MGP_CBAJ_T0031009.1 MGP_CBAJ_G0018598.1 mouse_genomes_project 11 92678386 92720704 - MGP_CBAJ_P0031009 Ggnbp2 protein_coding protein_coding MGP_CBAJ_T0031010.1 MGP_CBAJ_G0018598.1 mouse_genomes_project 11 92682466 92684030 - Ggnbp2 protein_coding processed_transcript MGP_CBAJ_T0031011.1 MGP_CBAJ_G0018598.1 mouse_genomes_project 11 92698362 92706040 - Ggnbp2 protein_coding processed_transcript MGP_CBAJ_T0031012.1 MGP_CBAJ_G0018598.1 mouse_genomes_project 11 92699932 92708210 - Ggnbp2 protein_coding retained_intron MGP_CBAJ_T0031013.1 MGP_CBAJ_G0018598.1 mouse_genomes_project 11 92708269 92720470 - MGP_CBAJ_P0031013 Ggnbp2 protein_coding protein_coding MGP_CBAJ_T0031014.1 MGP_CBAJ_G0018598.1 mouse_genomes_project 11 92716429 92720758 - Ggnbp2 protein_coding processed_transcript MGP_CBAJ_T0012514.1 MGP_CBAJ_G0010626.1 mouse_genomes_project 11 80464822 80465444 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031299.1 MGP_CBAJ_G0018669.1 mouse_genomes_project 11 102137203 102139040 + Car10 protein_coding processed_transcript MGP_CBAJ_T0031300.1 MGP_CBAJ_G0018669.1 mouse_genomes_project 11 102137579 102595795 + MGP_CBAJ_P0031300 Car10 protein_coding protein_coding MGP_CBAJ_T0031301.1 MGP_CBAJ_G0018669.1 mouse_genomes_project 11 102137579 102457059 + MGP_CBAJ_P0031301 Car10 protein_coding protein_coding MGP_CBAJ_T0031302.1 MGP_CBAJ_G0018669.1 mouse_genomes_project 11 102137579 102718452 + MGP_CBAJ_P0031302 Car10 protein_coding protein_coding MGP_CBAJ_T0031303.1 MGP_CBAJ_G0018669.1 mouse_genomes_project 11 102137589 102717985 + MGP_CBAJ_P0031303 Car10 protein_coding protein_coding MGP_CBAJ_T0031304.1 MGP_CBAJ_G0018669.1 mouse_genomes_project 11 102138463 102231414 + MGP_CBAJ_P0031304 Car10 protein_coding protein_coding MGP_CBAJ_T0031305.1 MGP_CBAJ_G0018669.1 mouse_genomes_project 11 102138463 102718456 + MGP_CBAJ_P0031305 Car10 protein_coding protein_coding MGP_CBAJ_T0009537.1 MGP_CBAJ_G0007675.1 mouse_genomes_project 11 20899979 20900068 - Gm22990 miRNA miRNA MGP_CBAJ_T0031238.1 MGP_CBAJ_G0018650.1 mouse_genomes_project 11 96721777 97168376 - MGP_CBAJ_P0031238 Msi2 protein_coding protein_coding MGP_CBAJ_T0031239.1 MGP_CBAJ_G0018650.1 mouse_genomes_project 11 96731630 97168323 - MGP_CBAJ_P0031239 Msi2 protein_coding protein_coding MGP_CBAJ_T0031240.1 MGP_CBAJ_G0018650.1 mouse_genomes_project 11 96754255 97012106 - Msi2 protein_coding retained_intron MGP_CBAJ_T0031241.1 MGP_CBAJ_G0018650.1 mouse_genomes_project 11 96890612 97168332 - Msi2 protein_coding retained_intron MGP_CBAJ_T0031242.1 MGP_CBAJ_G0018650.1 mouse_genomes_project 11 97012013 97172345 - MGP_CBAJ_P0031242 Msi2 protein_coding protein_coding MGP_CBAJ_T0031243.1 MGP_CBAJ_G0018650.1 mouse_genomes_project 11 97130773 97168376 - MGP_CBAJ_P0031243 Msi2 protein_coding protein_coding MGP_CBAJ_T0031244.1 MGP_CBAJ_G0018650.1 mouse_genomes_project 11 97159936 97168376 - Msi2 protein_coding processed_transcript MGP_CBAJ_T0012401.1 MGP_CBAJ_G0010513.1 mouse_genomes_project 11 31185942 31186696 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031171.1 MGP_CBAJ_G0018633.1 mouse_genomes_project 11 95807456 95855001 + MGP_CBAJ_P0031171 Hsf5 protein_coding protein_coding MGP_CBAJ_T0006270.1 MGP_CBAJ_G0005220.1 mouse_genomes_project 11 126758788 126793972 - 4932435O22Rik lincRNA lincRNA MGP_CBAJ_T0006271.1 MGP_CBAJ_G0005220.1 mouse_genomes_project 11 126759025 126769177 - 4932435O22Rik lincRNA lincRNA MGP_CBAJ_T0032778.1 MGP_CBAJ_G0019038.1 mouse_genomes_project 11 118669733 118698280 - MGP_CBAJ_P0032778 Nol11 protein_coding protein_coding MGP_CBAJ_T0032779.1 MGP_CBAJ_G0019038.1 mouse_genomes_project 11 118669733 118698280 - MGP_CBAJ_P0032779 Nol11 protein_coding protein_coding MGP_CBAJ_T0032780.1 MGP_CBAJ_G0019038.1 mouse_genomes_project 11 118670430 118671504 - Nol11 protein_coding processed_transcript MGP_CBAJ_T0032781.1 MGP_CBAJ_G0019038.1 mouse_genomes_project 11 118687606 118693721 - Nol11 protein_coding processed_transcript MGP_CBAJ_T0032782.1 MGP_CBAJ_G0019038.1 mouse_genomes_project 11 118695439 118698251 - Nol11 protein_coding processed_transcript MGP_CBAJ_T0030128.1 MGP_CBAJ_G0018364.1 mouse_genomes_project 11 78621172 78623730 + MGP_CBAJ_P0030128 Ggt6 protein_coding protein_coding MGP_CBAJ_T0030129.1 MGP_CBAJ_G0018364.1 mouse_genomes_project 11 78621177 78623728 + MGP_CBAJ_P0030129 Ggt6 protein_coding protein_coding MGP_CBAJ_T0009598.1 MGP_CBAJ_G0007736.1 mouse_genomes_project 11 85067734 85067800 + Mir144 miRNA miRNA MGP_CBAJ_T0012434.1 MGP_CBAJ_G0010546.1 mouse_genomes_project 11 51237242 51238514 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0033766.1 MGP_CBAJ_G0019238.1 mouse_genomes_project 11 133935194 133945289 - MGP_CBAJ_P0033766 Pycr1 protein_coding protein_coding MGP_CBAJ_T0033767.1 MGP_CBAJ_G0019238.1 mouse_genomes_project 11 133941034 133945367 - MGP_CBAJ_P0033767 Pycr1 protein_coding protein_coding MGP_CBAJ_T0033768.1 MGP_CBAJ_G0019238.1 mouse_genomes_project 11 133942842 133945262 - MGP_CBAJ_P0033768 Pycr1 protein_coding protein_coding MGP_CBAJ_T0033769.1 MGP_CBAJ_G0019238.1 mouse_genomes_project 11 133943096 133945323 - MGP_CBAJ_P0033769 Pycr1 protein_coding protein_coding MGP_CBAJ_T0033770.1 MGP_CBAJ_G0019238.1 mouse_genomes_project 11 133943332 133945388 - MGP_CBAJ_P0033770 Pycr1 protein_coding protein_coding MGP_CBAJ_T0033771.1 MGP_CBAJ_G0019238.1 mouse_genomes_project 11 133944363 133945323 - Pycr1 protein_coding retained_intron MGP_CBAJ_T0031271.1 MGP_CBAJ_G0018663.1 mouse_genomes_project 11 98827586 98894995 + Mmd protein_coding processed_transcript MGP_CBAJ_T0031272.1 MGP_CBAJ_G0018663.1 mouse_genomes_project 11 98827586 98897354 + Mmd protein_coding processed_transcript MGP_CBAJ_T0031273.1 MGP_CBAJ_G0018663.1 mouse_genomes_project 11 98827588 98867770 + Mmd protein_coding processed_transcript MGP_CBAJ_T0031274.1 MGP_CBAJ_G0018663.1 mouse_genomes_project 11 98895554 98914365 + MGP_CBAJ_P0031274 Mmd protein_coding protein_coding MGP_CBAJ_T0031275.1 MGP_CBAJ_G0018663.1 mouse_genomes_project 11 98895574 98926534 + MGP_CBAJ_P0031275 Mmd protein_coding protein_coding MGP_CBAJ_T0030678.1 MGP_CBAJ_G0018504.1 mouse_genomes_project 11 85557236 85563486 + MGP_CBAJ_P0030678 Slc46a1 protein_coding protein_coding MGP_CBAJ_T0030679.1 MGP_CBAJ_G0018504.1 mouse_genomes_project 11 85557289 85563162 + MGP_CBAJ_P0030679 Slc46a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030680.1 MGP_CBAJ_G0018504.1 mouse_genomes_project 11 85561765 85563600 + Slc46a1 protein_coding retained_intron MGP_CBAJ_T0031693.1 MGP_CBAJ_G0018767.1 mouse_genomes_project 11 107609826 107621878 - MGP_CBAJ_P0031693 Rpl23 protein_coding protein_coding MGP_CBAJ_T0031694.1 MGP_CBAJ_G0018767.1 mouse_genomes_project 11 107610337 107621717 - Rpl23 protein_coding processed_transcript MGP_CBAJ_T0031695.1 MGP_CBAJ_G0018767.1 mouse_genomes_project 11 107610355 107614869 - Rpl23 protein_coding processed_transcript MGP_CBAJ_T0031696.1 MGP_CBAJ_G0018767.1 mouse_genomes_project 11 107620802 107621803 - Rpl23 protein_coding processed_transcript MGP_CBAJ_T0031697.1 MGP_CBAJ_G0018767.1 mouse_genomes_project 11 107620844 107621823 - MGP_CBAJ_P0031697 Rpl23 protein_coding protein_coding MGP_CBAJ_T0028105.1 MGP_CBAJ_G0017852.1 mouse_genomes_project 11 32600093 32615373 + MGP_CBAJ_P0028105 4930524B15Rik protein_coding protein_coding MGP_CBAJ_T0033443.1 MGP_CBAJ_G0019172.1 mouse_genomes_project 11 130772061 130805764 + MGP_CBAJ_P0033443 Gm20708 protein_coding protein_coding MGP_CBAJ_T0012381.1 MGP_CBAJ_G0010493.1 mouse_genomes_project 11 26323713 26330353 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003061.1 MGP_CBAJ_G0002845.1 mouse_genomes_project 11 23744234 23768132 - Gm12064 antisense antisense MGP_CBAJ_T0029614.1 MGP_CBAJ_G0018253.1 mouse_genomes_project 11 75074683 75076497 + MGP_CBAJ_P0029614 Trappc1 protein_coding protein_coding MGP_CBAJ_T0029615.1 MGP_CBAJ_G0018253.1 mouse_genomes_project 11 75074766 75076497 + MGP_CBAJ_P0029615 Trappc1 protein_coding protein_coding MGP_CBAJ_T0029616.1 MGP_CBAJ_G0018253.1 mouse_genomes_project 11 75074778 75076497 + MGP_CBAJ_P0029616 Trappc1 protein_coding protein_coding MGP_CBAJ_T0029617.1 MGP_CBAJ_G0018253.1 mouse_genomes_project 11 75074860 75076497 + MGP_CBAJ_P0029617 Trappc1 protein_coding protein_coding MGP_CBAJ_T0029618.1 MGP_CBAJ_G0018253.1 mouse_genomes_project 11 75075141 75075936 + Trappc1 protein_coding processed_transcript MGP_CBAJ_T0033277.1 MGP_CBAJ_G0019140.1 mouse_genomes_project 11 128872842 128889319 + MGP_CBAJ_P0033277 Ten1 protein_coding protein_coding MGP_CBAJ_T0033278.1 MGP_CBAJ_G0019140.1 mouse_genomes_project 11 128872885 128880800 + Ten1 protein_coding retained_intron MGP_CBAJ_T0033279.1 MGP_CBAJ_G0019140.1 mouse_genomes_project 11 128872946 128889249 + Ten1 protein_coding processed_transcript MGP_CBAJ_T0033280.1 MGP_CBAJ_G0019140.1 mouse_genomes_project 11 128884935 128889249 + Ten1 protein_coding processed_transcript MGP_CBAJ_T0033017.1 MGP_CBAJ_G0019095.1 mouse_genomes_project 11 127670308 127677885 - MGP_CBAJ_P0033017 Nat9 protein_coding protein_coding MGP_CBAJ_T0033018.1 MGP_CBAJ_G0019095.1 mouse_genomes_project 11 127670308 127678374 - MGP_CBAJ_P0033018 Nat9 protein_coding protein_coding MGP_CBAJ_T0033019.1 MGP_CBAJ_G0019095.1 mouse_genomes_project 11 127670308 127677862 - MGP_CBAJ_P0033019 Nat9 protein_coding protein_coding MGP_CBAJ_T0033020.1 MGP_CBAJ_G0019095.1 mouse_genomes_project 11 127670308 127677920 - MGP_CBAJ_P0033020 Nat9 protein_coding protein_coding MGP_CBAJ_T0033021.1 MGP_CBAJ_G0019095.1 mouse_genomes_project 11 127675053 127677792 - Nat9 protein_coding processed_transcript MGP_CBAJ_T0033022.1 MGP_CBAJ_G0019095.1 mouse_genomes_project 11 127675157 127677611 - Nat9 protein_coding processed_transcript MGP_CBAJ_T0033023.1 MGP_CBAJ_G0019095.1 mouse_genomes_project 11 127675347 127678372 - Nat9 protein_coding processed_transcript MGP_CBAJ_T0033024.1 MGP_CBAJ_G0019095.1 mouse_genomes_project 11 127675348 127678389 - Nat9 protein_coding processed_transcript MGP_CBAJ_T0033025.1 MGP_CBAJ_G0019095.1 mouse_genomes_project 11 127675531 127677806 - Nat9 protein_coding processed_transcript MGP_CBAJ_T0009542.1 MGP_CBAJ_G0007680.1 mouse_genomes_project 11 28976317 28976403 + Mir216b miRNA miRNA MGP_CBAJ_T0033898.1 MGP_CBAJ_G0019264.1 mouse_genomes_project 11 134649283 134703236 + MGP_CBAJ_P0033898 Foxk2 protein_coding protein_coding MGP_CBAJ_T0033899.1 MGP_CBAJ_G0019264.1 mouse_genomes_project 11 134684253 134690599 + Foxk2 protein_coding processed_transcript MGP_CBAJ_T0033900.1 MGP_CBAJ_G0019264.1 mouse_genomes_project 11 134692022 134693402 + Foxk2 protein_coding retained_intron MGP_CBAJ_T0016935.1 MGP_CBAJ_G0014912.1 mouse_genomes_project 11 63268423 63280751 - 2310058D17Rik processed_transcript processed_transcript MGP_CBAJ_T0003286.1 MGP_CBAJ_G0003032.1 mouse_genomes_project 11 133482833 133483722 - Gm11772 antisense antisense MGP_CBAJ_T0012510.1 MGP_CBAJ_G0010622.1 mouse_genomes_project 11 79505479 79505698 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012345.1 MGP_CBAJ_G0010457.1 mouse_genomes_project 11 15214191 15215257 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012421.1 MGP_CBAJ_G0010533.1 mouse_genomes_project 11 42371818 42372164 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0033659.1 MGP_CBAJ_G0019215.1 mouse_genomes_project 11 133617042 133619555 + MGP_CBAJ_P0033659 0610009L18Rik protein_coding protein_coding MGP_CBAJ_T0012617.1 MGP_CBAJ_G0010729.1 mouse_genomes_project 11 129078022 129078479 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101534.1 MGP_CBAJ_G0039566.1 mouse_genomes_project 11 54021550 54022551 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0030878.1 MGP_CBAJ_G0018559.1 mouse_genomes_project 11 90461616 90469338 - MGP_CBAJ_P0030878 Nle1 protein_coding protein_coding MGP_CBAJ_T0030879.1 MGP_CBAJ_G0018559.1 mouse_genomes_project 11 90461620 90462671 - Nle1 protein_coding retained_intron MGP_CBAJ_T0030880.1 MGP_CBAJ_G0018559.1 mouse_genomes_project 11 90461628 90465202 - MGP_CBAJ_P0030880 Nle1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030881.1 MGP_CBAJ_G0018559.1 mouse_genomes_project 11 90462593 90465181 - Nle1 protein_coding retained_intron MGP_CBAJ_T0030882.1 MGP_CBAJ_G0018559.1 mouse_genomes_project 11 90465002 90465559 - Nle1 protein_coding retained_intron MGP_CBAJ_T0030883.1 MGP_CBAJ_G0018559.1 mouse_genomes_project 11 90465714 90468614 - MGP_CBAJ_P0030883 Nle1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030884.1 MGP_CBAJ_G0018559.1 mouse_genomes_project 11 90465844 90469269 - Nle1 protein_coding retained_intron MGP_CBAJ_T0027389.1 MGP_CBAJ_G0017689.1 mouse_genomes_project 11 625958 628624 + Selm protein_coding processed_transcript MGP_CBAJ_T0027390.1 MGP_CBAJ_G0017689.1 mouse_genomes_project 11 625976 628406 + Selm protein_coding processed_transcript MGP_CBAJ_T0027391.1 MGP_CBAJ_G0017689.1 mouse_genomes_project 11 626141 628627 + MGP_CBAJ_P0027391 Selm protein_coding protein_coding MGP_CBAJ_T0012539.1 MGP_CBAJ_G0010651.1 mouse_genomes_project 11 90266769 90267872 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0017029.1 MGP_CBAJ_G0014960.1 mouse_genomes_project 11 130545922 130548504 + 2900041M22Rik processed_transcript processed_transcript MGP_CBAJ_T0030116.1 MGP_CBAJ_G0018360.1 mouse_genomes_project 11 78454942 78462380 + MGP_CBAJ_P0030116 Xaf1 protein_coding protein_coding MGP_CBAJ_T0030117.1 MGP_CBAJ_G0018360.1 mouse_genomes_project 11 78454943 78466978 + MGP_CBAJ_P0030117 Xaf1 protein_coding protein_coding MGP_CBAJ_T0030118.1 MGP_CBAJ_G0018360.1 mouse_genomes_project 11 78454952 78465400 + MGP_CBAJ_P0030118 Xaf1 protein_coding protein_coding MGP_CBAJ_T0030119.1 MGP_CBAJ_G0018360.1 mouse_genomes_project 11 78454976 78462068 + MGP_CBAJ_P0030119 Xaf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030120.1 MGP_CBAJ_G0018360.1 mouse_genomes_project 11 78454978 78462087 + Xaf1 protein_coding retained_intron MGP_CBAJ_T0098698.1 MGP_CBAJ_G0036953.1 mouse_genomes_project 11 79137050 79137212 + Gm26121 snRNA snRNA MGP_CBAJ_T0030763.1 MGP_CBAJ_G0018528.1 mouse_genomes_project 11 87261493 87306701 + MGP_CBAJ_P0030763 Suz12 protein_coding protein_coding MGP_CBAJ_T0030764.1 MGP_CBAJ_G0018528.1 mouse_genomes_project 11 87261493 87306702 + MGP_CBAJ_P0030764 Suz12 protein_coding protein_coding MGP_CBAJ_T0030765.1 MGP_CBAJ_G0018528.1 mouse_genomes_project 11 87263973 87272168 + Suz12 protein_coding retained_intron MGP_CBAJ_T0030766.1 MGP_CBAJ_G0018528.1 mouse_genomes_project 11 87264004 87286041 + Suz12 protein_coding retained_intron MGP_CBAJ_T0030767.1 MGP_CBAJ_G0018528.1 mouse_genomes_project 11 87264178 87285971 + MGP_CBAJ_P0030767 Suz12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030768.1 MGP_CBAJ_G0018528.1 mouse_genomes_project 11 87297819 87304580 + MGP_CBAJ_P0030768 Suz12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0009610.1 MGP_CBAJ_G0007748.1 mouse_genomes_project 11 95970101 95970165 + Mir142 miRNA miRNA MGP_CBAJ_T0006199.1 MGP_CBAJ_G0005170.1 mouse_genomes_project 11 87289633 87295153 - Gm26563 lincRNA lincRNA MGP_CBAJ_T0006200.1 MGP_CBAJ_G0005170.1 mouse_genomes_project 11 87290759 87302447 - Gm26563 lincRNA lincRNA MGP_CBAJ_T0029431.1 MGP_CBAJ_G0018214.1 mouse_genomes_project 11 72601741 72631245 + MGP_CBAJ_P0029431 Myh1 protein_coding protein_coding MGP_CBAJ_T0029432.1 MGP_CBAJ_G0018214.1 mouse_genomes_project 11 72601800 72631167 + MGP_CBAJ_P0029432 Myh1 protein_coding protein_coding MGP_CBAJ_T0029433.1 MGP_CBAJ_G0018214.1 mouse_genomes_project 11 72601827 72603945 + MGP_CBAJ_P0029433 Myh1 protein_coding protein_coding MGP_CBAJ_T0029434.1 MGP_CBAJ_G0018214.1 mouse_genomes_project 11 72602095 72631243 + MGP_CBAJ_P0029434 Myh1 protein_coding protein_coding MGP_CBAJ_T0012444.1 MGP_CBAJ_G0010556.1 mouse_genomes_project 11 54042824 54046159 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0030225.1 MGP_CBAJ_G0018391.1 mouse_genomes_project 11 79764237 79769587 - MGP_CBAJ_P0030225 Olfr380 protein_coding protein_coding MGP_CBAJ_T0009643.1 MGP_CBAJ_G0007781.1 mouse_genomes_project 11 127749669 127749777 + Gm25837 miRNA miRNA MGP_CBAJ_T0006124.1 MGP_CBAJ_G0005106.1 mouse_genomes_project 11 33579752 33580716 - 4930555O08Rik lincRNA lincRNA MGP_CBAJ_T0033101.1 MGP_CBAJ_G0019113.1 mouse_genomes_project 11 128062184 128080258 - MGP_CBAJ_P0033101 Sumo2 protein_coding protein_coding MGP_CBAJ_T0033102.1 MGP_CBAJ_G0019113.1 mouse_genomes_project 11 128073995 128080158 - Sumo2 protein_coding retained_intron MGP_CBAJ_T0033103.1 MGP_CBAJ_G0019113.1 mouse_genomes_project 11 128078360 128080171 - Sumo2 protein_coding retained_intron MGP_CBAJ_T0098734.1 MGP_CBAJ_G0036989.1 mouse_genomes_project 11 118203445 118203552 - Gm25889 snRNA snRNA MGP_CBAJ_T0003206.1 MGP_CBAJ_G0002964.1 mouse_genomes_project 11 106374140 106375611 + Gm11537 antisense antisense MGP_CBAJ_T0012464.1 MGP_CBAJ_G0010576.1 mouse_genomes_project 11 60242670 60242899 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0033591.1 MGP_CBAJ_G0019204.1 mouse_genomes_project 11 132697761 132709628 - MGP_CBAJ_P0033591 Nptx1 protein_coding protein_coding MGP_CBAJ_T0027833.1 MGP_CBAJ_G0017792.1 mouse_genomes_project 11 19159678 19218660 - MGP_CBAJ_P0027833 Actr2 protein_coding protein_coding MGP_CBAJ_T0027834.1 MGP_CBAJ_G0017792.1 mouse_genomes_project 11 19179309 19218614 - Actr2 protein_coding processed_transcript MGP_CBAJ_T0027835.1 MGP_CBAJ_G0017792.1 mouse_genomes_project 11 19204733 19218656 - Actr2 protein_coding retained_intron MGP_CBAJ_T0003203.1 MGP_CBAJ_G0002962.1 mouse_genomes_project 11 105892318 105900791 - Gm11536 antisense antisense MGP_CBAJ_T0029121.1 MGP_CBAJ_G0018147.1 mouse_genomes_project 11 65067148 65085368 + Alkbh5 protein_coding processed_transcript MGP_CBAJ_T0029122.1 MGP_CBAJ_G0018147.1 mouse_genomes_project 11 65068746 65089471 + MGP_CBAJ_P0029122 Alkbh5 protein_coding protein_coding MGP_CBAJ_T0030108.1 MGP_CBAJ_G0018356.1 mouse_genomes_project 11 78343765 78346654 - MGP_CBAJ_P0030108 Gm43951 protein_coding protein_coding MGP_CBAJ_T0033343.1 MGP_CBAJ_G0019152.1 mouse_genomes_project 11 129332321 129347848 + Aanat protein_coding processed_transcript MGP_CBAJ_T0033344.1 MGP_CBAJ_G0019152.1 mouse_genomes_project 11 129339547 129348060 + MGP_CBAJ_P0033344 Aanat protein_coding nonsense_mediated_decay MGP_CBAJ_T0033345.1 MGP_CBAJ_G0019152.1 mouse_genomes_project 11 129339547 129348195 + MGP_CBAJ_P0033345 Aanat protein_coding protein_coding MGP_CBAJ_T0033346.1 MGP_CBAJ_G0019152.1 mouse_genomes_project 11 129341433 129348060 + MGP_CBAJ_P0033346 Aanat protein_coding nonsense_mediated_decay MGP_CBAJ_T0033347.1 MGP_CBAJ_G0019152.1 mouse_genomes_project 11 129341628 129346780 + Aanat protein_coding processed_transcript MGP_CBAJ_T0028764.1 MGP_CBAJ_G0018036.1 mouse_genomes_project 11 57777753 57791760 - MGP_CBAJ_P0028764 Pdlim4 protein_coding protein_coding MGP_CBAJ_T0028765.1 MGP_CBAJ_G0018036.1 mouse_genomes_project 11 57778746 57787623 - MGP_CBAJ_P0028765 Pdlim4 protein_coding protein_coding MGP_CBAJ_T0028766.1 MGP_CBAJ_G0018036.1 mouse_genomes_project 11 57781777 57791819 - Pdlim4 protein_coding retained_intron MGP_CBAJ_T0028767.1 MGP_CBAJ_G0018036.1 mouse_genomes_project 11 57786549 57787395 - Pdlim4 protein_coding processed_transcript MGP_CBAJ_T0033722.1 MGP_CBAJ_G0019229.1 mouse_genomes_project 11 133843741 133844895 - MGP_CBAJ_P0033722 Ppp1r27 protein_coding protein_coding MGP_CBAJ_T0012316.1 MGP_CBAJ_G0010428.1 mouse_genomes_project 11 2942904 2943159 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016943.1 MGP_CBAJ_G0014915.1 mouse_genomes_project 11 64147713 64162096 - 1700007J10Rik processed_transcript processed_transcript MGP_CBAJ_T0016944.1 MGP_CBAJ_G0014915.1 mouse_genomes_project 11 64147713 64154548 - 1700007J10Rik processed_transcript processed_transcript MGP_CBAJ_T0033137.1 MGP_CBAJ_G0019118.1 mouse_genomes_project 11 128190419 128208247 - MGP_CBAJ_P0033137 Slc25a19 protein_coding protein_coding MGP_CBAJ_T0033138.1 MGP_CBAJ_G0019118.1 mouse_genomes_project 11 128191692 128202857 - MGP_CBAJ_P0033138 Slc25a19 protein_coding protein_coding MGP_CBAJ_T0033139.1 MGP_CBAJ_G0019118.1 mouse_genomes_project 11 128192801 128194148 - Slc25a19 protein_coding processed_transcript MGP_CBAJ_T0033140.1 MGP_CBAJ_G0019118.1 mouse_genomes_project 11 128193904 128208179 - Slc25a19 protein_coding processed_transcript MGP_CBAJ_T0033141.1 MGP_CBAJ_G0019118.1 mouse_genomes_project 11 128203038 128208178 - Slc25a19 protein_coding processed_transcript MGP_CBAJ_T0033142.1 MGP_CBAJ_G0019118.1 mouse_genomes_project 11 128203448 128208184 - Slc25a19 protein_coding processed_transcript MGP_CBAJ_T0033143.1 MGP_CBAJ_G0019118.1 mouse_genomes_project 11 128203910 128208353 - Slc25a19 protein_coding processed_transcript MGP_CBAJ_T0033144.1 MGP_CBAJ_G0019118.1 mouse_genomes_project 11 128204232 128208184 - MGP_CBAJ_P0033144 Slc25a19 protein_coding protein_coding MGP_CBAJ_T0033145.1 MGP_CBAJ_G0019118.1 mouse_genomes_project 11 128204253 128208020 - MGP_CBAJ_P0033145 Slc25a19 protein_coding protein_coding MGP_CBAJ_T0033146.1 MGP_CBAJ_G0019118.1 mouse_genomes_project 11 128204308 128208202 - MGP_CBAJ_P0033146 Slc25a19 protein_coding protein_coding MGP_CBAJ_T0006222.1 MGP_CBAJ_G0005184.1 mouse_genomes_project 11 97203993 97206099 - Gm11493 lincRNA lincRNA MGP_CBAJ_T0028930.1 MGP_CBAJ_G0018082.1 mouse_genomes_project 11 62714619 62715685 - MGP_CBAJ_P0028930 Olfr30 protein_coding protein_coding MGP_CBAJ_T0031744.1 MGP_CBAJ_G0018777.1 mouse_genomes_project 11 108063128 108110015 - MGP_CBAJ_P0031744 Med1 protein_coding protein_coding MGP_CBAJ_T0031745.1 MGP_CBAJ_G0018777.1 mouse_genomes_project 11 108063131 108110192 - MGP_CBAJ_P0031745 Med1 protein_coding protein_coding MGP_CBAJ_T0031746.1 MGP_CBAJ_G0018777.1 mouse_genomes_project 11 108063988 108074934 - Med1 protein_coding processed_transcript MGP_CBAJ_T0031747.1 MGP_CBAJ_G0018777.1 mouse_genomes_project 11 108068729 108071999 - Med1 protein_coding processed_transcript MGP_CBAJ_T0031748.1 MGP_CBAJ_G0018777.1 mouse_genomes_project 11 108080339 108094221 - Med1 protein_coding processed_transcript MGP_CBAJ_T0031749.1 MGP_CBAJ_G0018777.1 mouse_genomes_project 11 108080887 108110208 - Med1 protein_coding processed_transcript MGP_CBAJ_T0029513.1 MGP_CBAJ_G0018233.1 mouse_genomes_project 11 74545449 74552686 + MGP_CBAJ_P0029513 Rnf222 protein_coding protein_coding MGP_CBAJ_T0029956.1 MGP_CBAJ_G0018329.1 mouse_genomes_project 11 76610541 76614853 - MGP_CBAJ_P0029956 Chrne protein_coding protein_coding MGP_CBAJ_T0029957.1 MGP_CBAJ_G0018329.1 mouse_genomes_project 11 76610541 76614875 - MGP_CBAJ_P0029957 Chrne protein_coding protein_coding MGP_CBAJ_T0029958.1 MGP_CBAJ_G0018329.1 mouse_genomes_project 11 76610543 76611332 - Chrne protein_coding retained_intron MGP_CBAJ_T0029959.1 MGP_CBAJ_G0018329.1 mouse_genomes_project 11 76610551 76611356 - Chrne protein_coding retained_intron MGP_CBAJ_T0009575.1 MGP_CBAJ_G0007713.1 mouse_genomes_project 11 74691159 74691264 - Mir3062 miRNA miRNA MGP_CBAJ_T0030016.1 MGP_CBAJ_G0018340.1 mouse_genomes_project 11 76791121 76802076 + MGP_CBAJ_P0030016 Zfp3 protein_coding protein_coding MGP_CBAJ_T0016959.1 MGP_CBAJ_G0014925.1 mouse_genomes_project 11 82207374 82212518 - 4931413K12Rik processed_transcript processed_transcript MGP_CBAJ_T0032881.1 MGP_CBAJ_G0019060.1 mouse_genomes_project 11 121789438 121857011 - MGP_CBAJ_P0032881 Abca8b protein_coding protein_coding MGP_CBAJ_T0032882.1 MGP_CBAJ_G0019060.1 mouse_genomes_project 11 121789675 121857081 - MGP_CBAJ_P0032882 Abca8b protein_coding unknown_likely_coding MGP_CBAJ_T0009551.1 MGP_CBAJ_G0007689.1 mouse_genomes_project 11 46702143 46702193 + Gm22121 miRNA miRNA MGP_CBAJ_T0028911.1 MGP_CBAJ_G0018076.1 mouse_genomes_project 11 62550479 62558711 - MGP_CBAJ_P0028911 Zfp672 protein_coding protein_coding MGP_CBAJ_T0028912.1 MGP_CBAJ_G0018076.1 mouse_genomes_project 11 62550489 62558688 - MGP_CBAJ_P0028912 Zfp672 protein_coding protein_coding MGP_CBAJ_T0028913.1 MGP_CBAJ_G0018076.1 mouse_genomes_project 11 62550580 62558478 - MGP_CBAJ_P0028913 Zfp672 protein_coding protein_coding MGP_CBAJ_T0028914.1 MGP_CBAJ_G0018076.1 mouse_genomes_project 11 62552589 62565641 - MGP_CBAJ_P0028914 Zfp672 protein_coding protein_coding MGP_CBAJ_T0028915.1 MGP_CBAJ_G0018076.1 mouse_genomes_project 11 62552691 62555327 - MGP_CBAJ_P0028915 Zfp672 protein_coding protein_coding MGP_CBAJ_T0028916.1 MGP_CBAJ_G0018076.1 mouse_genomes_project 11 62555076 62558679 - Zfp672 protein_coding processed_transcript MGP_CBAJ_T0028917.1 MGP_CBAJ_G0018076.1 mouse_genomes_project 11 62555110 62558679 - Zfp672 protein_coding processed_transcript MGP_CBAJ_T0028918.1 MGP_CBAJ_G0018076.1 mouse_genomes_project 11 62562521 62565649 - Zfp672 protein_coding retained_intron MGP_CBAJ_T0028919.1 MGP_CBAJ_G0018076.1 mouse_genomes_project 11 62563026 62565649 - MGP_CBAJ_P0028919 Zfp672 protein_coding protein_coding MGP_CBAJ_T0099965.1 MGP_CBAJ_G0038220.1 mouse_genomes_project 11 129430405 129430481 + Snord1c snoRNA snoRNA MGP_CBAJ_T0097906.1 MGP_CBAJ_G0036179.1 mouse_genomes_project 11 73593925 73594051 + Gm26157 rRNA rRNA MGP_CBAJ_T0029635.1 MGP_CBAJ_G0018258.1 mouse_genomes_project 11 75160282 75161120 + Naa38 protein_coding processed_transcript MGP_CBAJ_T0029636.1 MGP_CBAJ_G0018258.1 mouse_genomes_project 11 75160442 75161475 + MGP_CBAJ_P0029636 Naa38 protein_coding protein_coding MGP_CBAJ_T0029637.1 MGP_CBAJ_G0018258.1 mouse_genomes_project 11 75160609 75161475 + Naa38 protein_coding processed_transcript MGP_CBAJ_T0029638.1 MGP_CBAJ_G0018258.1 mouse_genomes_project 11 75160913 75161475 + Naa38 protein_coding processed_transcript MGP_CBAJ_T0031772.1 MGP_CBAJ_G0018784.1 mouse_genomes_project 11 108318173 108324814 - Pgap3 protein_coding processed_transcript MGP_CBAJ_T0031773.1 MGP_CBAJ_G0018784.1 mouse_genomes_project 11 108318173 108341070 - MGP_CBAJ_P0031773 Pgap3 protein_coding protein_coding MGP_CBAJ_T0031774.1 MGP_CBAJ_G0018784.1 mouse_genomes_project 11 108319120 108341015 - MGP_CBAJ_P0031774 Pgap3 protein_coding protein_coding MGP_CBAJ_T0031775.1 MGP_CBAJ_G0018784.1 mouse_genomes_project 11 108324063 108340994 - Pgap3 protein_coding processed_transcript MGP_CBAJ_T0031776.1 MGP_CBAJ_G0018784.1 mouse_genomes_project 11 108335471 108341017 - Pgap3 protein_coding processed_transcript MGP_CBAJ_T0033270.1 MGP_CBAJ_G0019139.1 mouse_genomes_project 11 128833232 128853596 - Acox1 protein_coding processed_transcript MGP_CBAJ_T0033271.1 MGP_CBAJ_G0019139.1 mouse_genomes_project 11 128833232 128873033 - MGP_CBAJ_P0033271 Acox1 protein_coding protein_coding MGP_CBAJ_T0033272.1 MGP_CBAJ_G0019139.1 mouse_genomes_project 11 128833232 128872789 - MGP_CBAJ_P0033272 Acox1 protein_coding protein_coding MGP_CBAJ_T0033273.1 MGP_CBAJ_G0019139.1 mouse_genomes_project 11 128833232 128860907 - MGP_CBAJ_P0033273 Acox1 protein_coding protein_coding MGP_CBAJ_T0033274.1 MGP_CBAJ_G0019139.1 mouse_genomes_project 11 128836691 128852847 - Acox1 protein_coding processed_transcript MGP_CBAJ_T0033275.1 MGP_CBAJ_G0019139.1 mouse_genomes_project 11 128848259 128853746 - Acox1 protein_coding processed_transcript MGP_CBAJ_T0033276.1 MGP_CBAJ_G0019139.1 mouse_genomes_project 11 128860360 128872717 - Acox1 protein_coding processed_transcript MGP_CBAJ_T0098720.1 MGP_CBAJ_G0036975.1 mouse_genomes_project 11 102512000 102512107 - Gm24856 snRNA snRNA MGP_CBAJ_T0006242.1 MGP_CBAJ_G0005198.1 mouse_genomes_project 11 107746496 107755947 + Gm11630 lincRNA lincRNA MGP_CBAJ_T0032633.1 MGP_CBAJ_G0019005.1 mouse_genomes_project 11 116601364 116704184 - MGP_CBAJ_P0032633 March10 protein_coding protein_coding MGP_CBAJ_T0032634.1 MGP_CBAJ_G0019005.1 mouse_genomes_project 11 116604337 116612125 - March10 protein_coding processed_transcript MGP_CBAJ_T0032635.1 MGP_CBAJ_G0019005.1 mouse_genomes_project 11 116637037 116651186 - MGP_CBAJ_P0032635 March10 protein_coding protein_coding MGP_CBAJ_T0032636.1 MGP_CBAJ_G0019005.1 mouse_genomes_project 11 116641998 116706514 - MGP_CBAJ_P0032636 March10 protein_coding protein_coding MGP_CBAJ_T0099946.1 MGP_CBAJ_G0038201.1 mouse_genomes_project 11 85198221 85198290 - Snord42b snoRNA snoRNA MGP_CBAJ_T0028156.1 MGP_CBAJ_G0017863.1 mouse_genomes_project 11 33195298 33266717 + MGP_CBAJ_P0028156 Ubtd2 protein_coding protein_coding MGP_CBAJ_T0006189.1 MGP_CBAJ_G0005163.1 mouse_genomes_project 11 82396215 82414361 - Gm26836 lincRNA lincRNA MGP_CBAJ_T0031800.1 MGP_CBAJ_G0018792.1 mouse_genomes_project 11 108644766 108664765 + MGP_CBAJ_P0031800 Gsdma2 protein_coding protein_coding MGP_CBAJ_T0031801.1 MGP_CBAJ_G0018792.1 mouse_genomes_project 11 108644770 108650514 + Gsdma2 protein_coding processed_transcript MGP_CBAJ_T0031802.1 MGP_CBAJ_G0018792.1 mouse_genomes_project 11 108644770 108664754 + MGP_CBAJ_P0031802 Gsdma2 protein_coding protein_coding MGP_CBAJ_T0031803.1 MGP_CBAJ_G0018792.1 mouse_genomes_project 11 108644776 108649475 + Gsdma2 protein_coding processed_transcript MGP_CBAJ_T0031804.1 MGP_CBAJ_G0018792.1 mouse_genomes_project 11 108644782 108650086 + Gsdma2 protein_coding processed_transcript MGP_CBAJ_T0031805.1 MGP_CBAJ_G0018792.1 mouse_genomes_project 11 108651049 108652451 + Gsdma2 protein_coding processed_transcript MGP_CBAJ_T0031806.1 MGP_CBAJ_G0018792.1 mouse_genomes_project 11 108651911 108661745 + Gsdma2 protein_coding processed_transcript MGP_CBAJ_T0031923.1 MGP_CBAJ_G0018838.1 mouse_genomes_project 11 109867045 109867563 - MGP_CBAJ_P0031923 Gm11555 protein_coding protein_coding MGP_CBAJ_T0006253.1 MGP_CBAJ_G0005207.1 mouse_genomes_project 11 121124007 121134166 + 1700096J18Rik lincRNA lincRNA MGP_CBAJ_T0003101.1 MGP_CBAJ_G0002881.1 mouse_genomes_project 11 59415429 59433673 + Gm12236 antisense antisense MGP_CBAJ_T0012390.1 MGP_CBAJ_G0010502.1 mouse_genomes_project 11 29204432 29205275 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003195.1 MGP_CBAJ_G0002956.1 mouse_genomes_project 11 104701301 104702697 - Gm11521 antisense antisense MGP_CBAJ_T0006283.1 MGP_CBAJ_G0005229.1 mouse_genomes_project 11 131812006 131814462 + Gm11750 lincRNA lincRNA MGP_CBAJ_T0006139.1 MGP_CBAJ_G0005121.1 mouse_genomes_project 11 47397728 47416053 - Gm12159 lincRNA lincRNA MGP_CBAJ_T0028590.1 MGP_CBAJ_G0017991.1 mouse_genomes_project 11 54454180 54463481 - MGP_CBAJ_P0028590 BC049762 protein_coding protein_coding MGP_CBAJ_T0028591.1 MGP_CBAJ_G0017991.1 mouse_genomes_project 11 54454180 54463576 - MGP_CBAJ_P0028591 BC049762 protein_coding protein_coding MGP_CBAJ_T0011674.1 MGP_CBAJ_G0009808.1 mouse_genomes_project 11 80316016 80316953 + MGP_CBAJ_P0011674 Olfr22-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0003255.1 MGP_CBAJ_G0003006.1 mouse_genomes_project 11 119608521 119609133 + Gm11657 antisense antisense MGP_CBAJ_T0032628.1 MGP_CBAJ_G0019004.1 mouse_genomes_project 11 116526682 116567122 + Mrc2 protein_coding processed_transcript MGP_CBAJ_T0032629.1 MGP_CBAJ_G0019004.1 mouse_genomes_project 11 116526685 116591347 + MGP_CBAJ_P0032629 Mrc2 protein_coding protein_coding MGP_CBAJ_T0032630.1 MGP_CBAJ_G0019004.1 mouse_genomes_project 11 116526707 116584068 + MGP_CBAJ_P0032630 Mrc2 protein_coding protein_coding MGP_CBAJ_T0032631.1 MGP_CBAJ_G0019004.1 mouse_genomes_project 11 116569282 116572530 + Mrc2 protein_coding processed_transcript MGP_CBAJ_T0032632.1 MGP_CBAJ_G0019004.1 mouse_genomes_project 11 116581033 116583346 + Mrc2 protein_coding retained_intron MGP_CBAJ_T0006206.1 MGP_CBAJ_G0005174.1 mouse_genomes_project 11 91554353 91594083 - Gm12576 lincRNA lincRNA MGP_CBAJ_T0029568.1 MGP_CBAJ_G0018243.1 mouse_genomes_project 11 74793897 74796122 + MGP_CBAJ_P0029568 Tmem107 protein_coding protein_coding MGP_CBAJ_T0029569.1 MGP_CBAJ_G0018243.1 mouse_genomes_project 11 74793902 74796385 + MGP_CBAJ_P0029569 Tmem107 protein_coding protein_coding MGP_CBAJ_T0029570.1 MGP_CBAJ_G0018243.1 mouse_genomes_project 11 74793904 74795915 + Tmem107 protein_coding processed_transcript MGP_CBAJ_T0029571.1 MGP_CBAJ_G0018243.1 mouse_genomes_project 11 74793945 74794595 + Tmem107 protein_coding processed_transcript MGP_CBAJ_T0029572.1 MGP_CBAJ_G0018243.1 mouse_genomes_project 11 74793964 74796353 + Tmem107 protein_coding processed_transcript MGP_CBAJ_T0029573.1 MGP_CBAJ_G0018243.1 mouse_genomes_project 11 74794009 74796116 + Tmem107 protein_coding processed_transcript MGP_CBAJ_T0029574.1 MGP_CBAJ_G0018243.1 mouse_genomes_project 11 74794027 74795908 + Tmem107 protein_coding processed_transcript MGP_CBAJ_T0029575.1 MGP_CBAJ_G0018243.1 mouse_genomes_project 11 74794393 74795652 + Tmem107 protein_coding processed_transcript MGP_CBAJ_T0030138.1 MGP_CBAJ_G0018366.1 mouse_genomes_project 11 78640904 78679167 - MGP_CBAJ_P0030138 Spns2 protein_coding protein_coding MGP_CBAJ_T0030139.1 MGP_CBAJ_G0018366.1 mouse_genomes_project 11 78640908 78643808 - Spns2 protein_coding retained_intron MGP_CBAJ_T0030140.1 MGP_CBAJ_G0018366.1 mouse_genomes_project 11 78641874 78645617 - Spns2 protein_coding processed_transcript MGP_CBAJ_T0030141.1 MGP_CBAJ_G0018366.1 mouse_genomes_project 11 78641998 78645888 - MGP_CBAJ_P0030141 Spns2 protein_coding protein_coding MGP_CBAJ_T0030142.1 MGP_CBAJ_G0018366.1 mouse_genomes_project 11 78642107 78643385 - Spns2 protein_coding processed_transcript MGP_CBAJ_T0030143.1 MGP_CBAJ_G0018366.1 mouse_genomes_project 11 78648295 78664294 - Spns2 protein_coding processed_transcript MGP_CBAJ_T0030942.1 MGP_CBAJ_G0018580.1 mouse_genomes_project 11 91360367 91360943 - MGP_CBAJ_P0030942 Rpl9-ps1 protein_coding protein_coding MGP_CBAJ_T0028183.1 MGP_CBAJ_G0017873.1 mouse_genomes_project 11 34489053 34522871 - MGP_CBAJ_P0028183 Gabrp protein_coding protein_coding MGP_CBAJ_T0028184.1 MGP_CBAJ_G0017873.1 mouse_genomes_project 11 34515531 34522873 - MGP_CBAJ_P0028184 Gabrp protein_coding protein_coding MGP_CBAJ_T0028192.1 MGP_CBAJ_G0017877.1 mouse_genomes_project 11 35074306 35124027 + MGP_CBAJ_P0028192 Lcp2 protein_coding protein_coding MGP_CBAJ_T0028193.1 MGP_CBAJ_G0017877.1 mouse_genomes_project 11 35074548 35121952 + MGP_CBAJ_P0028193 Lcp2 protein_coding protein_coding MGP_CBAJ_T0028194.1 MGP_CBAJ_G0017877.1 mouse_genomes_project 11 35074581 35124012 + MGP_CBAJ_P0028194 Lcp2 protein_coding protein_coding MGP_CBAJ_T0028195.1 MGP_CBAJ_G0017877.1 mouse_genomes_project 11 35109974 35110390 + Lcp2 protein_coding processed_transcript MGP_CBAJ_T0028196.1 MGP_CBAJ_G0017877.1 mouse_genomes_project 11 35118809 35122481 + Lcp2 protein_coding processed_transcript MGP_CBAJ_T0027686.1 MGP_CBAJ_G0017756.1 mouse_genomes_project 11 4265486 4273632 - MGP_CBAJ_P0027686 Nacad protein_coding protein_coding MGP_CBAJ_T0027687.1 MGP_CBAJ_G0017756.1 mouse_genomes_project 11 4265555 4267056 - MGP_CBAJ_P0027687 Nacad protein_coding nonsense_mediated_decay MGP_CBAJ_T0027688.1 MGP_CBAJ_G0017756.1 mouse_genomes_project 11 4265566 4267602 - MGP_CBAJ_P0027688 Nacad protein_coding nonsense_mediated_decay MGP_CBAJ_T0028961.1 MGP_CBAJ_G0018103.1 mouse_genomes_project 11 63162365 63176945 + MGP_CBAJ_P0028961 2810021J22Rik protein_coding protein_coding MGP_CBAJ_T0028962.1 MGP_CBAJ_G0018103.1 mouse_genomes_project 11 63162416 63171656 + MGP_CBAJ_P0028962 2810021J22Rik protein_coding protein_coding MGP_CBAJ_T0030346.1 MGP_CBAJ_G0018434.1 mouse_genomes_project 11 82003148 82017398 - MGP_CBAJ_P0030346 protein_coding unknown_likely_coding MGP_CBAJ_T0030347.1 MGP_CBAJ_G0018434.1 mouse_genomes_project 11 82014318 82017943 - MGP_CBAJ_P0030347 protein_coding protein_coding MGP_CBAJ_T0030348.1 MGP_CBAJ_G0018434.1 mouse_genomes_project 11 82014837 82017930 - MGP_CBAJ_P0030348 protein_coding nonsense_mediated_decay MGP_CBAJ_T0003241.1 MGP_CBAJ_G0002994.1 mouse_genomes_project 11 116396086 116399792 - 1700052K11Rik antisense antisense MGP_CBAJ_T0028371.1 MGP_CBAJ_G0017926.1 mouse_genomes_project 11 49097747 49164065 - MGP_CBAJ_P0028371 Timd2 protein_coding protein_coding MGP_CBAJ_T0028372.1 MGP_CBAJ_G0017926.1 mouse_genomes_project 11 49143115 49189095 - MGP_CBAJ_P0028372 Timd2 protein_coding protein_coding MGP_CBAJ_T0028373.1 MGP_CBAJ_G0017926.1 mouse_genomes_project 11 49143115 49176648 - MGP_CBAJ_P0028373 Timd2 protein_coding protein_coding MGP_CBAJ_T0028374.1 MGP_CBAJ_G0017926.1 mouse_genomes_project 11 49160743 49189097 - MGP_CBAJ_P0028374 Timd2 protein_coding protein_coding MGP_CBAJ_T0017000.1 MGP_CBAJ_G0014949.1 mouse_genomes_project 11 114187774 114190659 - 1700028N14Rik processed_transcript processed_transcript MGP_CBAJ_T0009557.1 MGP_CBAJ_G0007695.1 mouse_genomes_project 11 53363489 53363584 - Mir804 miRNA miRNA MGP_CBAJ_T0006224.1 MGP_CBAJ_G0005186.1 mouse_genomes_project 11 97678339 97680644 - Gm11497 lincRNA lincRNA MGP_CBAJ_T0101261.1 MGP_CBAJ_G0039392.1 mouse_genomes_project 11 52400123 52401515 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0028380.1 MGP_CBAJ_G0017928.1 mouse_genomes_project 11 49309771 49350718 + MGP_CBAJ_P0028380 Timd4 protein_coding protein_coding MGP_CBAJ_T0030634.1 MGP_CBAJ_G0018493.1 mouse_genomes_project 11 85227591 85275909 - MGP_CBAJ_P0030634 Supt6 protein_coding protein_coding MGP_CBAJ_T0030635.1 MGP_CBAJ_G0018493.1 mouse_genomes_project 11 85227873 85244509 - Supt6 protein_coding retained_intron MGP_CBAJ_T0003218.1 MGP_CBAJ_G0002974.1 mouse_genomes_project 11 109607331 109608126 + A830036E02Rik antisense antisense MGP_CBAJ_T0003219.1 MGP_CBAJ_G0002974.1 mouse_genomes_project 11 109607618 109613462 + A830036E02Rik antisense antisense MGP_CBAJ_T0003220.1 MGP_CBAJ_G0002974.1 mouse_genomes_project 11 109607623 109608669 + A830036E02Rik antisense antisense MGP_CBAJ_T0003221.1 MGP_CBAJ_G0002974.1 mouse_genomes_project 11 109610345 109615861 + A830036E02Rik antisense antisense MGP_CBAJ_T0031130.1 MGP_CBAJ_G0018626.1 mouse_genomes_project 11 95221446 95329597 + MGP_CBAJ_P0031130 Trim37 protein_coding protein_coding MGP_CBAJ_T0031131.1 MGP_CBAJ_G0018626.1 mouse_genomes_project 11 95221674 95246467 + MGP_CBAJ_P0031131 Trim37 protein_coding protein_coding MGP_CBAJ_T0031132.1 MGP_CBAJ_G0018626.1 mouse_genomes_project 11 95289758 95317320 + Trim37 protein_coding retained_intron MGP_CBAJ_T0031133.1 MGP_CBAJ_G0018626.1 mouse_genomes_project 11 95293379 95327172 + MGP_CBAJ_P0031133 Trim37 protein_coding protein_coding MGP_CBAJ_T0033229.1 MGP_CBAJ_G0019133.1 mouse_genomes_project 11 128714392 128729839 - MGP_CBAJ_P0033229 Unc13d protein_coding protein_coding MGP_CBAJ_T0033230.1 MGP_CBAJ_G0019133.1 mouse_genomes_project 11 128714393 128730050 - MGP_CBAJ_P0033230 Unc13d protein_coding protein_coding MGP_CBAJ_T0033231.1 MGP_CBAJ_G0019133.1 mouse_genomes_project 11 128714393 128730050 - MGP_CBAJ_P0033231 Unc13d protein_coding protein_coding MGP_CBAJ_T0033232.1 MGP_CBAJ_G0019133.1 mouse_genomes_project 11 128714873 128729713 - MGP_CBAJ_P0033232 Unc13d protein_coding nonsense_mediated_decay MGP_CBAJ_T0033233.1 MGP_CBAJ_G0019133.1 mouse_genomes_project 11 128714957 128729679 - MGP_CBAJ_P0033233 Unc13d protein_coding protein_coding MGP_CBAJ_T0033234.1 MGP_CBAJ_G0019133.1 mouse_genomes_project 11 128721115 128722676 - Unc13d protein_coding retained_intron MGP_CBAJ_T0033235.1 MGP_CBAJ_G0019133.1 mouse_genomes_project 11 128728195 128729139 - MGP_CBAJ_P0033235 Unc13d protein_coding protein_coding MGP_CBAJ_T0033236.1 MGP_CBAJ_G0019133.1 mouse_genomes_project 11 128728558 128730030 - MGP_CBAJ_P0033236 Unc13d protein_coding protein_coding MGP_CBAJ_T0006192.1 MGP_CBAJ_G0005166.1 mouse_genomes_project 11 84886970 84907159 - Gm11190 lincRNA lincRNA MGP_CBAJ_T0031426.1 MGP_CBAJ_G0018695.1 mouse_genomes_project 11 104076112 104082635 - MGP_CBAJ_P0031426 protein_coding protein_coding MGP_CBAJ_T0012436.1 MGP_CBAJ_G0010548.1 mouse_genomes_project 11 51285378 51285909 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0030449.1 MGP_CBAJ_G0018456.1 mouse_genomes_project 11 82987150 83136872 - MGP_CBAJ_P0030449 Nxn protein_coding protein_coding MGP_CBAJ_T0030450.1 MGP_CBAJ_G0018456.1 mouse_genomes_project 11 83091188 83136800 - Nxn protein_coding processed_transcript MGP_CBAJ_T0006106.1 MGP_CBAJ_G0005094.1 mouse_genomes_project 11 24163761 24255297 + 4933430M04Rik lincRNA lincRNA MGP_CBAJ_T0030479.1 MGP_CBAJ_G0018464.1 mouse_genomes_project 11 83753252 83754282 + Blmh protein_coding retained_intron MGP_CBAJ_T0030480.1 MGP_CBAJ_G0018464.1 mouse_genomes_project 11 83753262 83780240 + Blmh protein_coding retained_intron MGP_CBAJ_T0030481.1 MGP_CBAJ_G0018464.1 mouse_genomes_project 11 83753344 83779257 + MGP_CBAJ_P0030481 Blmh protein_coding protein_coding MGP_CBAJ_T0030482.1 MGP_CBAJ_G0018464.1 mouse_genomes_project 11 83753374 83799021 + MGP_CBAJ_P0030482 Blmh protein_coding nonsense_mediated_decay MGP_CBAJ_T0030483.1 MGP_CBAJ_G0018464.1 mouse_genomes_project 11 83753404 83799576 + MGP_CBAJ_P0030483 Blmh protein_coding protein_coding MGP_CBAJ_T0030484.1 MGP_CBAJ_G0018464.1 mouse_genomes_project 11 83753570 83762102 + MGP_CBAJ_P0030484 Blmh protein_coding protein_coding MGP_CBAJ_T0030485.1 MGP_CBAJ_G0018464.1 mouse_genomes_project 11 83753591 83760056 + MGP_CBAJ_P0030485 Blmh protein_coding protein_coding MGP_CBAJ_T0030486.1 MGP_CBAJ_G0018464.1 mouse_genomes_project 11 83771222 83778294 + Blmh protein_coding processed_transcript MGP_CBAJ_T0028289.1 MGP_CBAJ_G0017900.1 mouse_genomes_project 11 45538145 45553454 + MGP_CBAJ_P0028289 C1qtnf2 protein_coding protein_coding MGP_CBAJ_T0028290.1 MGP_CBAJ_G0017900.1 mouse_genomes_project 11 45538175 45553474 + MGP_CBAJ_P0028290 C1qtnf2 protein_coding protein_coding MGP_CBAJ_T0028291.1 MGP_CBAJ_G0017900.1 mouse_genomes_project 11 45544620 45552813 + MGP_CBAJ_P0028291 C1qtnf2 protein_coding protein_coding MGP_CBAJ_T0009569.1 MGP_CBAJ_G0007707.1 mouse_genomes_project 11 65287366 65287430 + Mir5100 miRNA miRNA MGP_CBAJ_T0032222.1 MGP_CBAJ_G0018927.1 mouse_genomes_project 11 112136524 112143852 + MGP_CBAJ_P0032222 Nbr1 protein_coding protein_coding MGP_CBAJ_T0032223.1 MGP_CBAJ_G0018927.1 mouse_genomes_project 11 112137148 112167864 + MGP_CBAJ_P0032223 Nbr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032224.1 MGP_CBAJ_G0018927.1 mouse_genomes_project 11 112137148 112167864 + MGP_CBAJ_P0032224 Nbr1 protein_coding protein_coding MGP_CBAJ_T0032225.1 MGP_CBAJ_G0018927.1 mouse_genomes_project 11 112137157 112153250 + Nbr1 protein_coding processed_transcript MGP_CBAJ_T0032226.1 MGP_CBAJ_G0018927.1 mouse_genomes_project 11 112137172 112167864 + MGP_CBAJ_P0032226 Nbr1 protein_coding protein_coding MGP_CBAJ_T0032227.1 MGP_CBAJ_G0018927.1 mouse_genomes_project 11 112137191 112143851 + MGP_CBAJ_P0032227 Nbr1 protein_coding protein_coding MGP_CBAJ_T0032228.1 MGP_CBAJ_G0018927.1 mouse_genomes_project 11 112137202 112167863 + MGP_CBAJ_P0032228 Nbr1 protein_coding protein_coding MGP_CBAJ_T0032229.1 MGP_CBAJ_G0018927.1 mouse_genomes_project 11 112140169 112143868 + MGP_CBAJ_P0032229 Nbr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032230.1 MGP_CBAJ_G0018927.1 mouse_genomes_project 11 112140475 112166925 + MGP_CBAJ_P0032230 Nbr1 protein_coding protein_coding MGP_CBAJ_T0032231.1 MGP_CBAJ_G0018927.1 mouse_genomes_project 11 112143824 112143887 + Nbr1 protein_coding misc_RNA MGP_CBAJ_T0032232.1 MGP_CBAJ_G0018927.1 mouse_genomes_project 11 112146085 112150028 + Nbr1 protein_coding retained_intron MGP_CBAJ_T0032233.1 MGP_CBAJ_G0018927.1 mouse_genomes_project 11 112150279 112153156 + Nbr1 protein_coding retained_intron MGP_CBAJ_T0032234.1 MGP_CBAJ_G0018927.1 mouse_genomes_project 11 112153003 112154113 + Nbr1 protein_coding retained_intron MGP_CBAJ_T0032235.1 MGP_CBAJ_G0018927.1 mouse_genomes_project 11 112153396 112154122 + Nbr1 protein_coding processed_transcript MGP_CBAJ_T0032236.1 MGP_CBAJ_G0018927.1 mouse_genomes_project 11 112158131 112161121 + Nbr1 protein_coding retained_intron MGP_CBAJ_T0032237.1 MGP_CBAJ_G0018927.1 mouse_genomes_project 11 112161011 112162536 + Nbr1 protein_coding retained_intron MGP_CBAJ_T0032238.1 MGP_CBAJ_G0018927.1 mouse_genomes_project 11 112163728 112166701 + Nbr1 protein_coding retained_intron MGP_CBAJ_T0011677.1 MGP_CBAJ_G0009811.1 mouse_genomes_project 11 128890003 128893781 + MGP_CBAJ_P0011677 Cdk3-ps polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0011678.1 MGP_CBAJ_G0009811.1 mouse_genomes_project 11 128890486 128891185 + Cdk3-ps polymorphic_pseudogene processed_transcript MGP_CBAJ_T0011679.1 MGP_CBAJ_G0009811.1 mouse_genomes_project 11 128890540 128894290 + Cdk3-ps polymorphic_pseudogene processed_transcript MGP_CBAJ_T0028250.1 MGP_CBAJ_G0017892.1 mouse_genomes_project 11 43737828 43848764 - MGP_CBAJ_P0028250 Gabrg2 protein_coding protein_coding MGP_CBAJ_T0028251.1 MGP_CBAJ_G0017892.1 mouse_genomes_project 11 43739318 43848438 - MGP_CBAJ_P0028251 Gabrg2 protein_coding protein_coding MGP_CBAJ_T0028252.1 MGP_CBAJ_G0017892.1 mouse_genomes_project 11 43739320 43745158 - Gabrg2 protein_coding retained_intron MGP_CBAJ_T0028253.1 MGP_CBAJ_G0017892.1 mouse_genomes_project 11 43743104 43848262 - MGP_CBAJ_P0028253 Gabrg2 protein_coding protein_coding MGP_CBAJ_T0031610.1 MGP_CBAJ_G0018746.1 mouse_genomes_project 11 106700263 106704282 + MGP_CBAJ_P0031610 Scrn2 protein_coding protein_coding MGP_CBAJ_T0031611.1 MGP_CBAJ_G0018746.1 mouse_genomes_project 11 106700277 106701531 + Scrn2 protein_coding retained_intron MGP_CBAJ_T0031612.1 MGP_CBAJ_G0018746.1 mouse_genomes_project 11 106700326 106704274 + Scrn2 protein_coding retained_intron MGP_CBAJ_T0031613.1 MGP_CBAJ_G0018746.1 mouse_genomes_project 11 106700459 106702601 + MGP_CBAJ_P0031613 Scrn2 protein_coding protein_coding MGP_CBAJ_T0027900.1 MGP_CBAJ_G0017810.1 mouse_genomes_project 11 22411140 22505025 - MGP_CBAJ_P0027900 protein_coding protein_coding MGP_CBAJ_T0027901.1 MGP_CBAJ_G0017810.1 mouse_genomes_project 11 22414763 22504895 - MGP_CBAJ_P0027901 protein_coding protein_coding MGP_CBAJ_T0027902.1 MGP_CBAJ_G0017810.1 mouse_genomes_project 11 22414768 22497830 - MGP_CBAJ_P0027902 protein_coding protein_coding MGP_CBAJ_T0027903.1 MGP_CBAJ_G0017810.1 mouse_genomes_project 11 22414839 22475604 - protein_coding retained_intron MGP_CBAJ_T0027904.1 MGP_CBAJ_G0017810.1 mouse_genomes_project 11 22415027 22491668 - protein_coding processed_transcript MGP_CBAJ_T0027905.1 MGP_CBAJ_G0017810.1 mouse_genomes_project 11 22474808 22504827 - MGP_CBAJ_P0027905 protein_coding protein_coding MGP_CBAJ_T0031545.1 MGP_CBAJ_G0018732.1 mouse_genomes_project 11 105874323 105877654 + MGP_CBAJ_P0031545 Hoxb4 protein_coding protein_coding MGP_CBAJ_T0029960.1 MGP_CBAJ_G0018330.1 mouse_genomes_project 11 76611506 76612534 + MGP_CBAJ_P0029960 4930544D05Rik protein_coding protein_coding MGP_CBAJ_T0029961.1 MGP_CBAJ_G0018330.1 mouse_genomes_project 11 76611552 76612529 + 4930544D05Rik protein_coding retained_intron MGP_CBAJ_T0029962.1 MGP_CBAJ_G0018330.1 mouse_genomes_project 11 76611555 76612549 + MGP_CBAJ_P0029962 4930544D05Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0029963.1 MGP_CBAJ_G0018330.1 mouse_genomes_project 11 76611568 76612536 + MGP_CBAJ_P0029963 4930544D05Rik protein_coding protein_coding MGP_CBAJ_T0032321.1 MGP_CBAJ_G0018946.1 mouse_genomes_project 11 112894933 112935541 - MGP_CBAJ_P0032321 Hdac5 protein_coding protein_coding MGP_CBAJ_T0032322.1 MGP_CBAJ_G0018946.1 mouse_genomes_project 11 112896245 112935499 - MGP_CBAJ_P0032322 Hdac5 protein_coding protein_coding MGP_CBAJ_T0032323.1 MGP_CBAJ_G0018946.1 mouse_genomes_project 11 112896248 112897687 - Hdac5 protein_coding retained_intron MGP_CBAJ_T0032324.1 MGP_CBAJ_G0018946.1 mouse_genomes_project 11 112896250 112898370 - Hdac5 protein_coding retained_intron MGP_CBAJ_T0032325.1 MGP_CBAJ_G0018946.1 mouse_genomes_project 11 112896250 112924321 - Hdac5 protein_coding retained_intron MGP_CBAJ_T0032326.1 MGP_CBAJ_G0018946.1 mouse_genomes_project 11 112896250 112897060 - Hdac5 protein_coding retained_intron MGP_CBAJ_T0032327.1 MGP_CBAJ_G0018946.1 mouse_genomes_project 11 112896250 112897070 - MGP_CBAJ_P0032327 Hdac5 protein_coding protein_coding MGP_CBAJ_T0032328.1 MGP_CBAJ_G0018946.1 mouse_genomes_project 11 112896250 112935514 - MGP_CBAJ_P0032328 Hdac5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032329.1 MGP_CBAJ_G0018946.1 mouse_genomes_project 11 112896252 112935511 - MGP_CBAJ_P0032329 Hdac5 protein_coding protein_coding MGP_CBAJ_T0032330.1 MGP_CBAJ_G0018946.1 mouse_genomes_project 11 112896252 112935541 - MGP_CBAJ_P0032330 Hdac5 protein_coding protein_coding MGP_CBAJ_T0032331.1 MGP_CBAJ_G0018946.1 mouse_genomes_project 11 112896738 112898581 - Hdac5 protein_coding retained_intron MGP_CBAJ_T0032332.1 MGP_CBAJ_G0018946.1 mouse_genomes_project 11 112897182 112899397 - Hdac5 protein_coding retained_intron MGP_CBAJ_T0032333.1 MGP_CBAJ_G0018946.1 mouse_genomes_project 11 112899180 112899995 - Hdac5 protein_coding retained_intron MGP_CBAJ_T0032334.1 MGP_CBAJ_G0018946.1 mouse_genomes_project 11 112899465 112900859 - Hdac5 protein_coding retained_intron MGP_CBAJ_T0032335.1 MGP_CBAJ_G0018946.1 mouse_genomes_project 11 112899891 112901318 - Hdac5 protein_coding retained_intron MGP_CBAJ_T0032336.1 MGP_CBAJ_G0018946.1 mouse_genomes_project 11 112906411 112923958 - MGP_CBAJ_P0032336 Hdac5 protein_coding protein_coding MGP_CBAJ_T0032337.1 MGP_CBAJ_G0018946.1 mouse_genomes_project 11 112907532 112924321 - Hdac5 protein_coding retained_intron MGP_CBAJ_T0032338.1 MGP_CBAJ_G0018946.1 mouse_genomes_project 11 112924102 112935508 - Hdac5 protein_coding processed_transcript MGP_CBAJ_T0032339.1 MGP_CBAJ_G0018946.1 mouse_genomes_project 11 112924544 112935521 - Hdac5 protein_coding processed_transcript MGP_CBAJ_T0030831.1 MGP_CBAJ_G0018542.1 mouse_genomes_project 11 88259410 88276802 + MGP_CBAJ_P0030831 Spaca3 protein_coding protein_coding MGP_CBAJ_T0030832.1 MGP_CBAJ_G0018542.1 mouse_genomes_project 11 88259417 88276806 + MGP_CBAJ_P0030832 Spaca3 protein_coding protein_coding MGP_CBAJ_T0012521.1 MGP_CBAJ_G0010633.1 mouse_genomes_project 11 83933916 83934245 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0032811.1 MGP_CBAJ_G0019047.1 mouse_genomes_project 11 120079197 120565578 + MGP_CBAJ_P0032811 Cep112 protein_coding protein_coding MGP_CBAJ_T0032812.1 MGP_CBAJ_G0019047.1 mouse_genomes_project 11 120079271 120565577 + MGP_CBAJ_P0032812 Cep112 protein_coding protein_coding MGP_CBAJ_T0032813.1 MGP_CBAJ_G0019047.1 mouse_genomes_project 11 120079282 120135500 + Cep112 protein_coding retained_intron MGP_CBAJ_T0032814.1 MGP_CBAJ_G0019047.1 mouse_genomes_project 11 120079296 120096676 + MGP_CBAJ_P0032814 Cep112 protein_coding protein_coding MGP_CBAJ_T0032815.1 MGP_CBAJ_G0019047.1 mouse_genomes_project 11 120079470 120203244 + MGP_CBAJ_P0032815 Cep112 protein_coding protein_coding MGP_CBAJ_T0032816.1 MGP_CBAJ_G0019047.1 mouse_genomes_project 11 120079513 120565578 + MGP_CBAJ_P0032816 Cep112 protein_coding protein_coding MGP_CBAJ_T0032817.1 MGP_CBAJ_G0019047.1 mouse_genomes_project 11 120079621 120565222 + MGP_CBAJ_P0032817 Cep112 protein_coding protein_coding MGP_CBAJ_T0032818.1 MGP_CBAJ_G0019047.1 mouse_genomes_project 11 120168163 120565313 + MGP_CBAJ_P0032818 Cep112 protein_coding protein_coding MGP_CBAJ_T0032819.1 MGP_CBAJ_G0019047.1 mouse_genomes_project 11 120203234 120248587 + Cep112 protein_coding retained_intron MGP_CBAJ_T0032820.1 MGP_CBAJ_G0019047.1 mouse_genomes_project 11 120265470 120457821 + MGP_CBAJ_P0032820 Cep112 protein_coding protein_coding MGP_CBAJ_T0032821.1 MGP_CBAJ_G0019047.1 mouse_genomes_project 11 120286699 120359240 + Cep112 protein_coding processed_transcript MGP_CBAJ_T0032822.1 MGP_CBAJ_G0019047.1 mouse_genomes_project 11 120330951 120565216 + Cep112 protein_coding processed_transcript MGP_CBAJ_T0032823.1 MGP_CBAJ_G0019047.1 mouse_genomes_project 11 120339933 120560837 + Cep112 protein_coding processed_transcript MGP_CBAJ_T0032824.1 MGP_CBAJ_G0019047.1 mouse_genomes_project 11 120380717 120565312 + MGP_CBAJ_P0032824 Cep112 protein_coding protein_coding MGP_CBAJ_T0032825.1 MGP_CBAJ_G0019047.1 mouse_genomes_project 11 120380724 120565578 + MGP_CBAJ_P0032825 Cep112 protein_coding protein_coding MGP_CBAJ_T0032826.1 MGP_CBAJ_G0019047.1 mouse_genomes_project 11 120380733 120565317 + MGP_CBAJ_P0032826 Cep112 protein_coding protein_coding MGP_CBAJ_T0032827.1 MGP_CBAJ_G0019047.1 mouse_genomes_project 11 120411744 120510700 + Cep112 protein_coding processed_transcript MGP_CBAJ_T0032828.1 MGP_CBAJ_G0019047.1 mouse_genomes_project 11 120452282 120564325 + MGP_CBAJ_P0032828 Cep112 protein_coding protein_coding MGP_CBAJ_T0098725.1 MGP_CBAJ_G0036980.1 mouse_genomes_project 11 108428374 108428508 - Gm25106 snRNA snRNA MGP_CBAJ_T0009655.1 MGP_CBAJ_G0007793.1 mouse_genomes_project 11 133527298 133527436 + miRNA miRNA MGP_CBAJ_T0031209.1 MGP_CBAJ_G0018642.1 mouse_genomes_project 11 96142771 96144041 - MGP_CBAJ_P0031209 protein_coding protein_coding MGP_CBAJ_T0003091.1 MGP_CBAJ_G0002873.1 mouse_genomes_project 11 57012661 57013896 - Gm12212 antisense antisense MGP_CBAJ_T0027392.1 MGP_CBAJ_G0017690.1 mouse_genomes_project 11 628798 650529 - Smtn protein_coding processed_transcript MGP_CBAJ_T0027393.1 MGP_CBAJ_G0017690.1 mouse_genomes_project 11 628798 648674 - MGP_CBAJ_P0027393 Smtn protein_coding protein_coding MGP_CBAJ_T0027394.1 MGP_CBAJ_G0017690.1 mouse_genomes_project 11 628798 650569 - MGP_CBAJ_P0027394 Smtn protein_coding protein_coding MGP_CBAJ_T0027395.1 MGP_CBAJ_G0017690.1 mouse_genomes_project 11 628798 650569 - MGP_CBAJ_P0027395 Smtn protein_coding protein_coding MGP_CBAJ_T0027396.1 MGP_CBAJ_G0017690.1 mouse_genomes_project 11 628798 639213 - MGP_CBAJ_P0027396 Smtn protein_coding protein_coding MGP_CBAJ_T0027397.1 MGP_CBAJ_G0017690.1 mouse_genomes_project 11 628798 650516 - MGP_CBAJ_P0027397 Smtn protein_coding protein_coding MGP_CBAJ_T0027398.1 MGP_CBAJ_G0017690.1 mouse_genomes_project 11 631813 633830 - Smtn protein_coding processed_transcript MGP_CBAJ_T0027399.1 MGP_CBAJ_G0017690.1 mouse_genomes_project 11 643735 651889 - MGP_CBAJ_P0027399 Smtn protein_coding protein_coding MGP_CBAJ_T0027400.1 MGP_CBAJ_G0017690.1 mouse_genomes_project 11 643878 650528 - MGP_CBAJ_P0027400 Smtn protein_coding protein_coding MGP_CBAJ_T0027401.1 MGP_CBAJ_G0017690.1 mouse_genomes_project 11 646089 650526 - Smtn protein_coding processed_transcript MGP_CBAJ_T0032473.1 MGP_CBAJ_G0018969.1 mouse_genomes_project 11 113719288 113736386 - MGP_CBAJ_P0032473 Gfap protein_coding protein_coding MGP_CBAJ_T0032474.1 MGP_CBAJ_G0018969.1 mouse_genomes_project 11 113727327 113736455 - MGP_CBAJ_P0032474 Gfap protein_coding protein_coding MGP_CBAJ_T0032475.1 MGP_CBAJ_G0018969.1 mouse_genomes_project 11 113733732 113740172 - Gfap protein_coding processed_transcript MGP_CBAJ_T0012432.1 MGP_CBAJ_G0010544.1 mouse_genomes_project 11 49023767 49024344 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0033877.1 MGP_CBAJ_G0019258.1 mouse_genomes_project 11 134528932 134531109 + MGP_CBAJ_P0033877 Tex19.1 protein_coding protein_coding MGP_CBAJ_T0033878.1 MGP_CBAJ_G0019258.1 mouse_genomes_project 11 134528946 134529657 + MGP_CBAJ_P0033878 Tex19.1 protein_coding protein_coding MGP_CBAJ_T0012528.1 MGP_CBAJ_G0010640.1 mouse_genomes_project 11 85685578 85686697 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0030579.1 MGP_CBAJ_G0018482.1 mouse_genomes_project 11 84965165 85013454 + MGP_CBAJ_P0030579 Phf12 protein_coding protein_coding MGP_CBAJ_T0030580.1 MGP_CBAJ_G0018482.1 mouse_genomes_project 11 84965213 85017779 + MGP_CBAJ_P0030580 Phf12 protein_coding protein_coding MGP_CBAJ_T0030581.1 MGP_CBAJ_G0018482.1 mouse_genomes_project 11 85009879 85013432 + MGP_CBAJ_P0030581 Phf12 protein_coding protein_coding MGP_CBAJ_T0030582.1 MGP_CBAJ_G0018482.1 mouse_genomes_project 11 85010093 85013201 + Phf12 protein_coding retained_intron MGP_CBAJ_T0030583.1 MGP_CBAJ_G0018482.1 mouse_genomes_project 11 85010127 85013422 + MGP_CBAJ_P0030583 Phf12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030584.1 MGP_CBAJ_G0018482.1 mouse_genomes_project 11 85010194 85016087 + MGP_CBAJ_P0030584 Phf12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030585.1 MGP_CBAJ_G0018482.1 mouse_genomes_project 11 85010217 85013256 + MGP_CBAJ_P0030585 Phf12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030586.1 MGP_CBAJ_G0018482.1 mouse_genomes_project 11 85015349 85016817 + Phf12 protein_coding retained_intron MGP_CBAJ_T0033390.1 MGP_CBAJ_G0019163.1 mouse_genomes_project 11 129602040 129627913 + MGP_CBAJ_P0033390 Mfsd11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033391.1 MGP_CBAJ_G0019163.1 mouse_genomes_project 11 129602895 129608533 + Mfsd11 protein_coding retained_intron MGP_CBAJ_T0033392.1 MGP_CBAJ_G0019163.1 mouse_genomes_project 11 129603075 129603660 + Mfsd11 protein_coding processed_transcript MGP_CBAJ_T0033393.1 MGP_CBAJ_G0019163.1 mouse_genomes_project 11 129603363 129627920 + MGP_CBAJ_P0033393 Mfsd11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033394.1 MGP_CBAJ_G0019163.1 mouse_genomes_project 11 129603380 129603858 + Mfsd11 protein_coding retained_intron MGP_CBAJ_T0033395.1 MGP_CBAJ_G0019163.1 mouse_genomes_project 11 129603421 129628658 + MGP_CBAJ_P0033395 Mfsd11 protein_coding protein_coding MGP_CBAJ_T0033396.1 MGP_CBAJ_G0019163.1 mouse_genomes_project 11 129603430 129604318 + Mfsd11 protein_coding retained_intron MGP_CBAJ_T0033397.1 MGP_CBAJ_G0019163.1 mouse_genomes_project 11 129603496 129628658 + MGP_CBAJ_P0033397 Mfsd11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033398.1 MGP_CBAJ_G0019163.1 mouse_genomes_project 11 129603627 129627368 + MGP_CBAJ_P0033398 Mfsd11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033399.1 MGP_CBAJ_G0019163.1 mouse_genomes_project 11 129603679 129627146 + MGP_CBAJ_P0033399 Mfsd11 protein_coding protein_coding MGP_CBAJ_T0033400.1 MGP_CBAJ_G0019163.1 mouse_genomes_project 11 129608562 129614872 + Mfsd11 protein_coding retained_intron MGP_CBAJ_T0033401.1 MGP_CBAJ_G0019163.1 mouse_genomes_project 11 129621595 129627038 + Mfsd11 protein_coding processed_transcript MGP_CBAJ_T0030890.1 MGP_CBAJ_G0018561.1 mouse_genomes_project 11 90515142 90515964 + Slfn5 protein_coding processed_transcript MGP_CBAJ_T0030891.1 MGP_CBAJ_G0018561.1 mouse_genomes_project 11 90515888 90523785 + MGP_CBAJ_P0030891 Slfn5 protein_coding protein_coding MGP_CBAJ_T0030892.1 MGP_CBAJ_G0018561.1 mouse_genomes_project 11 90515895 90526733 + MGP_CBAJ_P0030892 Slfn5 protein_coding protein_coding MGP_CBAJ_T0030893.1 MGP_CBAJ_G0018561.1 mouse_genomes_project 11 90518442 90525679 + MGP_CBAJ_P0030893 Slfn5 protein_coding protein_coding MGP_CBAJ_T0027987.1 MGP_CBAJ_G0017827.1 mouse_genomes_project 11 26383683 26514785 - MGP_CBAJ_P0027987 Vrk2 protein_coding protein_coding MGP_CBAJ_T0027988.1 MGP_CBAJ_G0017827.1 mouse_genomes_project 11 26383765 26519063 - MGP_CBAJ_P0027988 Vrk2 protein_coding protein_coding MGP_CBAJ_T0027989.1 MGP_CBAJ_G0017827.1 mouse_genomes_project 11 26451912 26518765 - Vrk2 protein_coding retained_intron MGP_CBAJ_T0027990.1 MGP_CBAJ_G0017827.1 mouse_genomes_project 11 26452328 26467504 - Vrk2 protein_coding processed_transcript MGP_CBAJ_T0027991.1 MGP_CBAJ_G0017827.1 mouse_genomes_project 11 26463535 26519066 - Vrk2 protein_coding retained_intron MGP_CBAJ_T0027992.1 MGP_CBAJ_G0017827.1 mouse_genomes_project 11 26465988 26519142 - MGP_CBAJ_P0027992 Vrk2 protein_coding protein_coding MGP_CBAJ_T0027993.1 MGP_CBAJ_G0017827.1 mouse_genomes_project 11 26506366 26518746 - Vrk2 protein_coding processed_transcript MGP_CBAJ_T0030356.1 MGP_CBAJ_G0018437.1 mouse_genomes_project 11 82082618 82110010 + MGP_CBAJ_P0030356 Prpf8 protein_coding protein_coding MGP_CBAJ_T0030357.1 MGP_CBAJ_G0018437.1 mouse_genomes_project 11 82082622 82110012 + MGP_CBAJ_P0030357 Prpf8 protein_coding protein_coding MGP_CBAJ_T0030358.1 MGP_CBAJ_G0018437.1 mouse_genomes_project 11 82082657 82091742 + MGP_CBAJ_P0030358 Prpf8 protein_coding protein_coding MGP_CBAJ_T0030359.1 MGP_CBAJ_G0018437.1 mouse_genomes_project 11 82088167 82089857 + Prpf8 protein_coding retained_intron MGP_CBAJ_T0012374.1 MGP_CBAJ_G0010486.1 mouse_genomes_project 11 21343659 21344223 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0028849.1 MGP_CBAJ_G0018054.1 mouse_genomes_project 11 59072473 59105835 + MGP_CBAJ_P0028849 Slc36a1 protein_coding protein_coding MGP_CBAJ_T0028850.1 MGP_CBAJ_G0018054.1 mouse_genomes_project 11 59072485 59082370 + Slc36a1 protein_coding processed_transcript MGP_CBAJ_T0028851.1 MGP_CBAJ_G0018054.1 mouse_genomes_project 11 59072497 59090182 + MGP_CBAJ_P0028851 Slc36a1 protein_coding protein_coding MGP_CBAJ_T0028852.1 MGP_CBAJ_G0018054.1 mouse_genomes_project 11 59072499 59103348 + MGP_CBAJ_P0028852 Slc36a1 protein_coding protein_coding MGP_CBAJ_T0028853.1 MGP_CBAJ_G0018054.1 mouse_genomes_project 11 59081902 59100779 + MGP_CBAJ_P0028853 Slc36a1 protein_coding protein_coding MGP_CBAJ_T0029784.1 MGP_CBAJ_G0018294.1 mouse_genomes_project 11 75778896 75783447 - MGP_CBAJ_P0029784 Eif5a protein_coding protein_coding MGP_CBAJ_T0029785.1 MGP_CBAJ_G0018294.1 mouse_genomes_project 11 75779635 75783098 - MGP_CBAJ_P0029785 Eif5a protein_coding protein_coding MGP_CBAJ_T0031265.1 MGP_CBAJ_G0018659.1 mouse_genomes_project 11 97977430 98006383 - MGP_CBAJ_P0031265 protein_coding protein_coding MGP_CBAJ_T0029164.1 MGP_CBAJ_G0018158.1 mouse_genomes_project 11 65618935 65678146 + MGP_CBAJ_P0029164 Kcnj12 protein_coding protein_coding MGP_CBAJ_T0029165.1 MGP_CBAJ_G0018158.1 mouse_genomes_project 11 65672830 65678146 + MGP_CBAJ_P0029165 Kcnj12 protein_coding protein_coding MGP_CBAJ_T0029166.1 MGP_CBAJ_G0018158.1 mouse_genomes_project 11 65672830 65678142 + MGP_CBAJ_P0029166 Kcnj12 protein_coding protein_coding MGP_CBAJ_T0030362.1 MGP_CBAJ_G0018439.1 mouse_genomes_project 11 82114137 82129307 + MGP_CBAJ_P0030362 Scarf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030363.1 MGP_CBAJ_G0018439.1 mouse_genomes_project 11 82114140 82134748 + MGP_CBAJ_P0030363 Scarf1 protein_coding protein_coding MGP_CBAJ_T0006211.1 MGP_CBAJ_G0005177.1 mouse_genomes_project 11 92592920 92607182 - Gm11431 lincRNA lincRNA MGP_CBAJ_T0098710.1 MGP_CBAJ_G0036965.1 mouse_genomes_project 11 93076864 93076971 + Gm23506 snRNA snRNA MGP_CBAJ_T0033843.1 MGP_CBAJ_G0019251.1 mouse_genomes_project 11 134158263 134277149 - MGP_CBAJ_P0033843 Ccdc57 protein_coding protein_coding MGP_CBAJ_T0033844.1 MGP_CBAJ_G0019251.1 mouse_genomes_project 11 134158276 134216760 - Ccdc57 protein_coding processed_transcript MGP_CBAJ_T0033845.1 MGP_CBAJ_G0019251.1 mouse_genomes_project 11 134216880 134228857 - Ccdc57 protein_coding processed_transcript MGP_CBAJ_T0031409.1 MGP_CBAJ_G0018690.1 mouse_genomes_project 11 103915099 103927234 - MGP_CBAJ_P0031409 Eme1 protein_coding protein_coding MGP_CBAJ_T0031410.1 MGP_CBAJ_G0018690.1 mouse_genomes_project 11 103917816 103920621 - Eme1 protein_coding processed_transcript MGP_CBAJ_T0031411.1 MGP_CBAJ_G0018690.1 mouse_genomes_project 11 103919984 103920796 - Eme1 protein_coding processed_transcript MGP_CBAJ_T0031412.1 MGP_CBAJ_G0018690.1 mouse_genomes_project 11 103920665 103926941 - Eme1 protein_coding processed_transcript MGP_CBAJ_T0027494.1 MGP_CBAJ_G0017714.1 mouse_genomes_project 11 1944059 1996098 + MGP_CBAJ_P0027494 Ascc2 protein_coding protein_coding MGP_CBAJ_T0027495.1 MGP_CBAJ_G0017714.1 mouse_genomes_project 11 1944059 1998412 + MGP_CBAJ_P0027495 Ascc2 protein_coding protein_coding MGP_CBAJ_T0032754.1 MGP_CBAJ_G0019034.1 mouse_genomes_project 11 118228325 118257917 + MGP_CBAJ_P0032754 Cep95 protein_coding protein_coding MGP_CBAJ_T0032755.1 MGP_CBAJ_G0019034.1 mouse_genomes_project 11 118228348 118257910 + MGP_CBAJ_P0032755 Cep95 protein_coding protein_coding MGP_CBAJ_T0032756.1 MGP_CBAJ_G0019034.1 mouse_genomes_project 11 118228360 118230341 + Cep95 protein_coding processed_transcript MGP_CBAJ_T0032757.1 MGP_CBAJ_G0019034.1 mouse_genomes_project 11 118251354 118252896 + Cep95 protein_coding processed_transcript MGP_CBAJ_T0032758.1 MGP_CBAJ_G0019034.1 mouse_genomes_project 11 118253279 118254835 + Cep95 protein_coding processed_transcript MGP_CBAJ_T0032759.1 MGP_CBAJ_G0019034.1 mouse_genomes_project 11 118256890 118257918 + Cep95 protein_coding processed_transcript MGP_CBAJ_T0032760.1 MGP_CBAJ_G0019034.1 mouse_genomes_project 11 118256935 118258989 + MGP_CBAJ_P0032760 Cep95 protein_coding protein_coding MGP_CBAJ_T0028100.1 MGP_CBAJ_G0017850.1 mouse_genomes_project 11 32262496 32269006 - MGP_CBAJ_P0028100 Bod1 protein_coding protein_coding MGP_CBAJ_T0028101.1 MGP_CBAJ_G0017850.1 mouse_genomes_project 11 32263716 32268845 - MGP_CBAJ_P0028101 Bod1 protein_coding protein_coding MGP_CBAJ_T0028627.1 MGP_CBAJ_G0017998.1 mouse_genomes_project 11 54892916 54900685 - MGP_CBAJ_P0028627 N4bp3 protein_coding protein_coding MGP_CBAJ_T0028628.1 MGP_CBAJ_G0017998.1 mouse_genomes_project 11 54895407 54900680 - MGP_CBAJ_P0028628 N4bp3 protein_coding protein_coding MGP_CBAJ_T0028629.1 MGP_CBAJ_G0017998.1 mouse_genomes_project 11 54895472 54900663 - MGP_CBAJ_P0028629 N4bp3 protein_coding protein_coding MGP_CBAJ_T0029746.1 MGP_CBAJ_G0018287.1 mouse_genomes_project 11 75692172 75696833 + MGP_CBAJ_P0029746 Plscr3 protein_coding protein_coding MGP_CBAJ_T0029747.1 MGP_CBAJ_G0018287.1 mouse_genomes_project 11 75692413 75697855 + MGP_CBAJ_P0029747 Plscr3 protein_coding protein_coding MGP_CBAJ_T0029748.1 MGP_CBAJ_G0018287.1 mouse_genomes_project 11 75692413 75694172 + MGP_CBAJ_P0029748 Plscr3 protein_coding protein_coding MGP_CBAJ_T0029749.1 MGP_CBAJ_G0018287.1 mouse_genomes_project 11 75692472 75696840 + MGP_CBAJ_P0029749 Plscr3 protein_coding protein_coding MGP_CBAJ_T0032948.1 MGP_CBAJ_G0019076.1 mouse_genomes_project 11 126067135 126395001 - MGP_CBAJ_P0032948 Sdk2 protein_coding protein_coding MGP_CBAJ_T0032949.1 MGP_CBAJ_G0019076.1 mouse_genomes_project 11 126085277 126111307 - Sdk2 protein_coding processed_transcript MGP_CBAJ_T0032950.1 MGP_CBAJ_G0019076.1 mouse_genomes_project 11 126102725 126127131 - Sdk2 protein_coding processed_transcript MGP_CBAJ_T0032951.1 MGP_CBAJ_G0019076.1 mouse_genomes_project 11 126158494 126394758 - MGP_CBAJ_P0032951 Sdk2 protein_coding protein_coding MGP_CBAJ_T0032952.1 MGP_CBAJ_G0019076.1 mouse_genomes_project 11 126175716 126395829 - Sdk2 protein_coding processed_transcript MGP_CBAJ_T0032953.1 MGP_CBAJ_G0019076.1 mouse_genomes_project 11 126250239 126395812 - Sdk2 protein_coding processed_transcript MGP_CBAJ_T0012628.1 MGP_CBAJ_G0010740.1 mouse_genomes_project 11 134810486 134810821 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0033854.1 MGP_CBAJ_G0019253.1 mouse_genomes_project 11 134312347 134349305 - MGP_CBAJ_P0033854 Csnk1d protein_coding protein_coding MGP_CBAJ_T0033855.1 MGP_CBAJ_G0019253.1 mouse_genomes_project 11 134312347 134349543 - MGP_CBAJ_P0033855 Csnk1d protein_coding protein_coding MGP_CBAJ_T0033856.1 MGP_CBAJ_G0019253.1 mouse_genomes_project 11 134314246 134316285 - Csnk1d protein_coding processed_transcript MGP_CBAJ_T0033857.1 MGP_CBAJ_G0019253.1 mouse_genomes_project 11 134314371 134322224 - Csnk1d protein_coding processed_transcript MGP_CBAJ_T0033858.1 MGP_CBAJ_G0019253.1 mouse_genomes_project 11 134318210 134318660 - Csnk1d protein_coding processed_transcript MGP_CBAJ_T0033859.1 MGP_CBAJ_G0019253.1 mouse_genomes_project 11 134323070 134349084 - MGP_CBAJ_P0033859 Csnk1d protein_coding protein_coding MGP_CBAJ_T0033860.1 MGP_CBAJ_G0019253.1 mouse_genomes_project 11 134323088 134349200 - MGP_CBAJ_P0033860 Csnk1d protein_coding nonsense_mediated_decay MGP_CBAJ_T0033861.1 MGP_CBAJ_G0019253.1 mouse_genomes_project 11 134336598 134349264 - Csnk1d protein_coding retained_intron MGP_CBAJ_T0031781.1 MGP_CBAJ_G0018787.1 mouse_genomes_project 11 108392949 108405336 + MGP_CBAJ_P0031781 Grb7 protein_coding protein_coding MGP_CBAJ_T0031782.1 MGP_CBAJ_G0018787.1 mouse_genomes_project 11 108393389 108409292 + MGP_CBAJ_P0031782 Grb7 protein_coding protein_coding MGP_CBAJ_T0031783.1 MGP_CBAJ_G0018787.1 mouse_genomes_project 11 108393603 108409292 + Grb7 protein_coding retained_intron MGP_CBAJ_T0031784.1 MGP_CBAJ_G0018787.1 mouse_genomes_project 11 108393623 108409292 + Grb7 protein_coding retained_intron MGP_CBAJ_T0031785.1 MGP_CBAJ_G0018787.1 mouse_genomes_project 11 108405760 108407741 + Grb7 protein_coding retained_intron MGP_CBAJ_T0031786.1 MGP_CBAJ_G0018787.1 mouse_genomes_project 11 108407707 108409044 + Grb7 protein_coding retained_intron MGP_CBAJ_T0027791.1 MGP_CBAJ_G0017780.1 mouse_genomes_project 11 15278209 15286164 - MGP_CBAJ_P0027791 Sec61g protein_coding protein_coding MGP_CBAJ_T0027792.1 MGP_CBAJ_G0017780.1 mouse_genomes_project 11 15279066 15285846 - MGP_CBAJ_P0027792 Sec61g protein_coding protein_coding MGP_CBAJ_T0027793.1 MGP_CBAJ_G0017780.1 mouse_genomes_project 11 15279317 15286164 - MGP_CBAJ_P0027793 Sec61g protein_coding protein_coding MGP_CBAJ_T0027794.1 MGP_CBAJ_G0017780.1 mouse_genomes_project 11 15279317 15286164 - MGP_CBAJ_P0027794 Sec61g protein_coding protein_coding MGP_CBAJ_T0027795.1 MGP_CBAJ_G0017780.1 mouse_genomes_project 11 15279322 15282724 - Sec61g protein_coding retained_intron MGP_CBAJ_T0027796.1 MGP_CBAJ_G0017780.1 mouse_genomes_project 11 15279330 15285749 - MGP_CBAJ_P0027796 Sec61g protein_coding protein_coding MGP_CBAJ_T0027797.1 MGP_CBAJ_G0017780.1 mouse_genomes_project 11 15283771 15285812 - Sec61g protein_coding retained_intron MGP_CBAJ_T0032997.1 MGP_CBAJ_G0019086.1 mouse_genomes_project 11 127404017 127411224 - MGP_CBAJ_P0032997 Cd300c protein_coding protein_coding MGP_CBAJ_T0006134.1 MGP_CBAJ_G0005116.1 mouse_genomes_project 11 45116263 45131403 - Gm12145 lincRNA lincRNA MGP_CBAJ_T0030841.1 MGP_CBAJ_G0018548.1 mouse_genomes_project 11 89564835 89569902 + MGP_CBAJ_P0030841 Ccl11 protein_coding protein_coding MGP_CBAJ_T0033456.1 MGP_CBAJ_G0019175.1 mouse_genomes_project 11 130788686 130805768 + MGP_CBAJ_P0033456 Afmid protein_coding protein_coding MGP_CBAJ_T0033457.1 MGP_CBAJ_G0019175.1 mouse_genomes_project 11 130788736 130803092 + MGP_CBAJ_P0033457 Afmid protein_coding protein_coding MGP_CBAJ_T0033458.1 MGP_CBAJ_G0019175.1 mouse_genomes_project 11 130788743 130795409 + Afmid protein_coding retained_intron MGP_CBAJ_T0033459.1 MGP_CBAJ_G0019175.1 mouse_genomes_project 11 130794862 130801275 + Afmid protein_coding retained_intron MGP_CBAJ_T0033460.1 MGP_CBAJ_G0019175.1 mouse_genomes_project 11 130794988 130803089 + Afmid protein_coding retained_intron MGP_CBAJ_T0033461.1 MGP_CBAJ_G0019175.1 mouse_genomes_project 11 130795031 130801382 + Afmid protein_coding retained_intron MGP_CBAJ_T0033528.1 MGP_CBAJ_G0019191.1 mouse_genomes_project 11 132030881 132035527 + MGP_CBAJ_P0033528 Enpp7 protein_coding protein_coding MGP_CBAJ_T0033529.1 MGP_CBAJ_G0019191.1 mouse_genomes_project 11 132030909 132035351 + MGP_CBAJ_P0033529 Enpp7 protein_coding protein_coding MGP_CBAJ_T0030916.1 MGP_CBAJ_G0018571.1 mouse_genomes_project 11 91103507 91113176 + MGP_CBAJ_P0030916 Rasl10b protein_coding protein_coding MGP_CBAJ_T0030917.1 MGP_CBAJ_G0018571.1 mouse_genomes_project 11 91104045 91115381 + MGP_CBAJ_P0030917 Rasl10b protein_coding protein_coding MGP_CBAJ_T0030918.1 MGP_CBAJ_G0018571.1 mouse_genomes_project 11 91104045 91115379 + MGP_CBAJ_P0030918 Rasl10b protein_coding protein_coding MGP_CBAJ_T0030919.1 MGP_CBAJ_G0018571.1 mouse_genomes_project 11 91104429 91115380 + MGP_CBAJ_P0030919 Rasl10b protein_coding protein_coding MGP_CBAJ_T0033901.1 MGP_CBAJ_G0019265.1 mouse_genomes_project 11 134715904 134729265 - Wdr45b protein_coding processed_transcript MGP_CBAJ_T0033902.1 MGP_CBAJ_G0019265.1 mouse_genomes_project 11 134716030 134726445 - MGP_CBAJ_P0033902 Wdr45b protein_coding unknown_likely_coding MGP_CBAJ_T0033903.1 MGP_CBAJ_G0019265.1 mouse_genomes_project 11 134718765 134753722 - MGP_CBAJ_P0033903 Wdr45b protein_coding protein_coding MGP_CBAJ_T0033904.1 MGP_CBAJ_G0019265.1 mouse_genomes_project 11 134723047 134753774 - MGP_CBAJ_P0033904 Wdr45b protein_coding protein_coding MGP_CBAJ_T0033905.1 MGP_CBAJ_G0019265.1 mouse_genomes_project 11 134740179 134753782 - Wdr45b protein_coding retained_intron MGP_CBAJ_T0031047.1 MGP_CBAJ_G0018606.1 mouse_genomes_project 11 93241323 93292110 + MGP_CBAJ_P0031047 Ppm1d protein_coding protein_coding MGP_CBAJ_T0031048.1 MGP_CBAJ_G0018606.1 mouse_genomes_project 11 93242243 93282282 + MGP_CBAJ_P0031048 Ppm1d protein_coding protein_coding MGP_CBAJ_T0006104.1 MGP_CBAJ_G0005092.1 mouse_genomes_project 11 23863480 23879654 + Gm12066 lincRNA lincRNA MGP_CBAJ_T0027813.1 MGP_CBAJ_G0017787.1 mouse_genomes_project 11 16034005 16042375 - MGP_CBAJ_P0027813 Pno1 protein_coding protein_coding MGP_CBAJ_T0027814.1 MGP_CBAJ_G0017787.1 mouse_genomes_project 11 16039596 16041861 - Pno1 protein_coding processed_transcript MGP_CBAJ_T0003179.1 MGP_CBAJ_G0002945.1 mouse_genomes_project 11 94197750 94209491 + Brip1os antisense antisense MGP_CBAJ_T0003180.1 MGP_CBAJ_G0002945.1 mouse_genomes_project 11 94197763 94317004 + Brip1os antisense antisense MGP_CBAJ_T0031866.1 MGP_CBAJ_G0018806.1 mouse_genomes_project 11 109106897 109141554 - MGP_CBAJ_P0031866 Top2a protein_coding unknown_likely_coding MGP_CBAJ_T0031867.1 MGP_CBAJ_G0018806.1 mouse_genomes_project 11 109106898 109141677 - MGP_CBAJ_P0031867 Top2a protein_coding protein_coding MGP_CBAJ_T0031868.1 MGP_CBAJ_G0018806.1 mouse_genomes_project 11 109107026 109109680 - Top2a protein_coding processed_transcript MGP_CBAJ_T0031869.1 MGP_CBAJ_G0018806.1 mouse_genomes_project 11 109107422 109109326 - Top2a protein_coding processed_transcript MGP_CBAJ_T0031870.1 MGP_CBAJ_G0018806.1 mouse_genomes_project 11 109115280 109116594 - Top2a protein_coding processed_transcript MGP_CBAJ_T0031871.1 MGP_CBAJ_G0018806.1 mouse_genomes_project 11 109118958 109121758 - Top2a protein_coding processed_transcript MGP_CBAJ_T0031872.1 MGP_CBAJ_G0018806.1 mouse_genomes_project 11 109134080 109139698 - Top2a protein_coding processed_transcript MGP_CBAJ_T0031873.1 MGP_CBAJ_G0018806.1 mouse_genomes_project 11 109139572 109141666 - Top2a protein_coding processed_transcript MGP_CBAJ_T0031499.1 MGP_CBAJ_G0018716.1 mouse_genomes_project 11 105272375 105284652 - MGP_CBAJ_P0031499 Abi3 protein_coding protein_coding MGP_CBAJ_T0031501.1 MGP_CBAJ_G0018716.1 mouse_genomes_project 11 105274245 105284719 - Abi3 protein_coding processed_transcript MGP_CBAJ_T0031502.1 MGP_CBAJ_G0018716.1 mouse_genomes_project 11 105275012 105278171 - MGP_CBAJ_P0031502 Abi3 protein_coding protein_coding MGP_CBAJ_T0031503.1 MGP_CBAJ_G0018716.1 mouse_genomes_project 11 105279343 105284341 - Abi3 protein_coding processed_transcript MGP_CBAJ_T0009613.1 MGP_CBAJ_G0007751.1 mouse_genomes_project 11 105444202 105444294 - Mir3063 miRNA miRNA MGP_CBAJ_T0097911.1 MGP_CBAJ_G0036184.1 mouse_genomes_project 11 94438894 94439014 + Gm23667 rRNA rRNA MGP_CBAJ_T0028623.1 MGP_CBAJ_G0017997.1 mouse_genomes_project 11 54873067 54885036 - MGP_CBAJ_P0028623 Rmnd5b protein_coding nonsense_mediated_decay MGP_CBAJ_T0028624.1 MGP_CBAJ_G0017997.1 mouse_genomes_project 11 54873069 54885285 - MGP_CBAJ_P0028624 Rmnd5b protein_coding protein_coding MGP_CBAJ_T0028625.1 MGP_CBAJ_G0017997.1 mouse_genomes_project 11 54873435 54875231 - MGP_CBAJ_P0028625 Rmnd5b protein_coding protein_coding MGP_CBAJ_T0028626.1 MGP_CBAJ_G0017997.1 mouse_genomes_project 11 54878724 54885142 - Rmnd5b protein_coding processed_transcript MGP_CBAJ_T0027761.1 MGP_CBAJ_G0017776.1 mouse_genomes_project 11 10098068 10192014 - MGP_CBAJ_P0027761 Ddc protein_coding protein_coding MGP_CBAJ_T0027762.1 MGP_CBAJ_G0017776.1 mouse_genomes_project 11 10098068 10191914 - MGP_CBAJ_P0027762 Ddc protein_coding protein_coding MGP_CBAJ_T0027763.1 MGP_CBAJ_G0017776.1 mouse_genomes_project 11 10098070 10106872 - Ddc protein_coding processed_transcript MGP_CBAJ_T0027764.1 MGP_CBAJ_G0017776.1 mouse_genomes_project 11 10098070 10184366 - MGP_CBAJ_P0027764 Ddc protein_coding protein_coding MGP_CBAJ_T0027765.1 MGP_CBAJ_G0017776.1 mouse_genomes_project 11 10103317 10123078 - Ddc protein_coding processed_transcript MGP_CBAJ_T0027766.1 MGP_CBAJ_G0017776.1 mouse_genomes_project 11 10131774 10156190 - Ddc protein_coding processed_transcript MGP_CBAJ_T0027767.1 MGP_CBAJ_G0017776.1 mouse_genomes_project 11 10136337 10184327 - MGP_CBAJ_P0027767 Ddc protein_coding protein_coding MGP_CBAJ_T0027768.1 MGP_CBAJ_G0017776.1 mouse_genomes_project 11 10153099 10184359 - Ddc protein_coding processed_transcript MGP_CBAJ_T0027769.1 MGP_CBAJ_G0017776.1 mouse_genomes_project 11 10167118 10174695 - Ddc protein_coding processed_transcript MGP_CBAJ_T0027770.1 MGP_CBAJ_G0017776.1 mouse_genomes_project 11 10169058 10184356 - Ddc protein_coding processed_transcript MGP_CBAJ_T0031724.1 MGP_CBAJ_G0018772.1 mouse_genomes_project 11 107865033 107871568 - MGP_CBAJ_P0031724 Arl5c protein_coding protein_coding MGP_CBAJ_T0031725.1 MGP_CBAJ_G0018772.1 mouse_genomes_project 11 107869224 107871316 - MGP_CBAJ_P0031725 Arl5c protein_coding protein_coding MGP_CBAJ_T0012403.1 MGP_CBAJ_G0010515.1 mouse_genomes_project 11 31333324 31333686 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098691.1 MGP_CBAJ_G0036946.1 mouse_genomes_project 11 66666900 66667007 - Gm23721 snRNA snRNA MGP_CBAJ_T0006194.1 MGP_CBAJ_G0005168.1 mouse_genomes_project 11 86924802 86925593 + Gm11205 lincRNA lincRNA MGP_CBAJ_T0032545.1 MGP_CBAJ_G0018985.1 mouse_genomes_project 11 114601762 114609560 - MGP_CBAJ_P0032545 Lyzl6 protein_coding protein_coding MGP_CBAJ_T0032546.1 MGP_CBAJ_G0018985.1 mouse_genomes_project 11 114601765 114609571 - MGP_CBAJ_P0032546 Lyzl6 protein_coding protein_coding MGP_CBAJ_T0032547.1 MGP_CBAJ_G0018985.1 mouse_genomes_project 11 114601768 114605711 - Lyzl6 protein_coding processed_transcript MGP_CBAJ_T0098671.1 MGP_CBAJ_G0036926.1 mouse_genomes_project 11 17631265 17631367 + Gm23093 snRNA snRNA MGP_CBAJ_T0028168.1 MGP_CBAJ_G0017868.1 mouse_genomes_project 11 33973778 34003762 - MGP_CBAJ_P0028168 Fgf18 protein_coding protein_coding MGP_CBAJ_T0028952.1 MGP_CBAJ_G0018098.1 mouse_genomes_project 11 63044212 63045275 + MGP_CBAJ_P0028952 Olfr316 protein_coding protein_coding MGP_CBAJ_T0098703.1 MGP_CBAJ_G0036958.1 mouse_genomes_project 11 85935636 85935723 + Gm23219 snRNA snRNA MGP_CBAJ_T0028843.1 MGP_CBAJ_G0018051.1 mouse_genomes_project 11 58944995 58962425 + MGP_CBAJ_P0028843 Gm2a protein_coding protein_coding MGP_CBAJ_T0033604.1 MGP_CBAJ_G0019206.1 mouse_genomes_project 11 133116169 133118434 + MGP_CBAJ_P0033604 Chmp6 protein_coding protein_coding MGP_CBAJ_T0033605.1 MGP_CBAJ_G0019206.1 mouse_genomes_project 11 133116214 133121878 + MGP_CBAJ_P0033605 Chmp6 protein_coding protein_coding MGP_CBAJ_T0033606.1 MGP_CBAJ_G0019206.1 mouse_genomes_project 11 133118161 133121388 + Chmp6 protein_coding retained_intron MGP_CBAJ_T0033607.1 MGP_CBAJ_G0019206.1 mouse_genomes_project 11 133119070 133120968 + Chmp6 protein_coding retained_intron MGP_CBAJ_T0031929.1 MGP_CBAJ_G0018844.1 mouse_genomes_project 11 110022028 110022906 - MGP_CBAJ_P0031929 Krtap4-8 protein_coding protein_coding MGP_CBAJ_T0003159.1 MGP_CBAJ_G0002929.1 mouse_genomes_project 11 85315679 85316008 - Gm11192 antisense antisense MGP_CBAJ_T0033658.1 MGP_CBAJ_G0019214.1 mouse_genomes_project 11 133608944 133616844 - MGP_CBAJ_P0033658 protein_coding protein_coding MGP_CBAJ_T0033159.1 MGP_CBAJ_G0019121.1 mouse_genomes_project 11 128417975 128432337 - MGP_CBAJ_P0033159 Caskin2 protein_coding protein_coding MGP_CBAJ_T0033160.1 MGP_CBAJ_G0019121.1 mouse_genomes_project 11 128418792 128419674 - Caskin2 protein_coding processed_transcript MGP_CBAJ_T0033161.1 MGP_CBAJ_G0019121.1 mouse_genomes_project 11 128423528 128426816 - MGP_CBAJ_P0033161 Caskin2 protein_coding protein_coding MGP_CBAJ_T0033162.1 MGP_CBAJ_G0019121.1 mouse_genomes_project 11 128425490 128432346 - MGP_CBAJ_P0033162 Caskin2 protein_coding protein_coding MGP_CBAJ_T0029040.1 MGP_CBAJ_G0018133.1 mouse_genomes_project 11 64218575 64248097 - MGP_CBAJ_P0029040 Flcn protein_coding protein_coding MGP_CBAJ_T0029041.1 MGP_CBAJ_G0018133.1 mouse_genomes_project 11 64218624 64248005 - Flcn protein_coding retained_intron MGP_CBAJ_T0029042.1 MGP_CBAJ_G0018133.1 mouse_genomes_project 11 64218957 64247669 - MGP_CBAJ_P0029042 Flcn protein_coding protein_coding MGP_CBAJ_T0029043.1 MGP_CBAJ_G0018133.1 mouse_genomes_project 11 64230822 64247682 - Flcn protein_coding processed_transcript MGP_CBAJ_T0029044.1 MGP_CBAJ_G0018133.1 mouse_genomes_project 11 64234662 64248075 - MGP_CBAJ_P0029044 Flcn protein_coding protein_coding MGP_CBAJ_T0029045.1 MGP_CBAJ_G0018133.1 mouse_genomes_project 11 64247106 64247792 - Flcn protein_coding retained_intron MGP_CBAJ_T0027855.1 MGP_CBAJ_G0017798.1 mouse_genomes_project 11 20060412 20067884 - MGP_CBAJ_P0027855 Lgalsl protein_coding protein_coding MGP_CBAJ_T0027856.1 MGP_CBAJ_G0017798.1 mouse_genomes_project 11 20063189 20067583 - Lgalsl protein_coding processed_transcript MGP_CBAJ_T0027857.1 MGP_CBAJ_G0017798.1 mouse_genomes_project 11 20066139 20067884 - Lgalsl protein_coding processed_transcript MGP_CBAJ_T0027858.1 MGP_CBAJ_G0017798.1 mouse_genomes_project 11 20066624 20067850 - Lgalsl protein_coding processed_transcript MGP_CBAJ_T0011173.1 MGP_CBAJ_G0009311.1 mouse_genomes_project 11 53531827 53532103 - Gm23824 misc_RNA misc_RNA MGP_CBAJ_T0009602.1 MGP_CBAJ_G0007740.1 mouse_genomes_project 11 86932522 86932588 + Mir193a miRNA miRNA MGP_CBAJ_T0009628.1 MGP_CBAJ_G0007766.1 mouse_genomes_project 11 111517949 111518019 + Mir6928 miRNA miRNA MGP_CBAJ_T0012402.1 MGP_CBAJ_G0010514.1 mouse_genomes_project 11 31253596 31253977 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009584.1 MGP_CBAJ_G0007722.1 mouse_genomes_project 11 76164040 76164134 + Mir195a miRNA miRNA MGP_CBAJ_T0033421.1 MGP_CBAJ_G0019168.1 mouse_genomes_project 11 130598779 130717299 + MGP_CBAJ_P0033421 Tnrc6c protein_coding protein_coding MGP_CBAJ_T0033422.1 MGP_CBAJ_G0019168.1 mouse_genomes_project 11 130599063 130717290 + Tnrc6c protein_coding retained_intron MGP_CBAJ_T0033423.1 MGP_CBAJ_G0019168.1 mouse_genomes_project 11 130599303 130717301 + MGP_CBAJ_P0033423 Tnrc6c protein_coding protein_coding MGP_CBAJ_T0033424.1 MGP_CBAJ_G0019168.1 mouse_genomes_project 11 130674905 130716140 + MGP_CBAJ_P0033424 Tnrc6c protein_coding protein_coding MGP_CBAJ_T0033425.1 MGP_CBAJ_G0019168.1 mouse_genomes_project 11 130696377 130703178 + Tnrc6c protein_coding retained_intron MGP_CBAJ_T0033426.1 MGP_CBAJ_G0019168.1 mouse_genomes_project 11 130703107 130705185 + Tnrc6c protein_coding retained_intron MGP_CBAJ_T0098706.1 MGP_CBAJ_G0036961.1 mouse_genomes_project 11 86852820 86852928 - Gm24887 snRNA snRNA MGP_CBAJ_T0003278.1 MGP_CBAJ_G0003024.1 mouse_genomes_project 11 130743324 130745054 - Gm11723 antisense antisense MGP_CBAJ_T0028466.1 MGP_CBAJ_G0017959.1 mouse_genomes_project 11 52460128 52464030 + MGP_CBAJ_P0028466 protein_coding protein_coding MGP_CBAJ_T0016990.1 MGP_CBAJ_G0014940.1 mouse_genomes_project 11 106722903 106725650 - Gm11574 processed_transcript processed_transcript MGP_CBAJ_T0012419.1 MGP_CBAJ_G0010531.1 mouse_genomes_project 11 42245201 42245667 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012343.1 MGP_CBAJ_G0010455.1 mouse_genomes_project 11 13654128 13655228 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0029633.1 MGP_CBAJ_G0018257.1 mouse_genomes_project 11 75153870 75160427 - protein_coding processed_transcript MGP_CBAJ_T0029634.1 MGP_CBAJ_G0018257.1 mouse_genomes_project 11 75158648 75160089 - MGP_CBAJ_P0029634 protein_coding protein_coding MGP_CBAJ_T0012564.1 MGP_CBAJ_G0010676.1 mouse_genomes_project 11 105198203 105198378 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0029007.1 MGP_CBAJ_G0018121.1 mouse_genomes_project 11 63596367 63652895 - MGP_CBAJ_P0029007 Wnt3a protein_coding protein_coding MGP_CBAJ_T0030412.1 MGP_CBAJ_G0018448.1 mouse_genomes_project 11 82677121 82680779 + MGP_CBAJ_P0030412 1700016K19Rik protein_coding protein_coding MGP_CBAJ_T0003201.1 MGP_CBAJ_G0002961.1 mouse_genomes_project 11 105846862 105862978 - Hoxb5os antisense antisense MGP_CBAJ_T0003202.1 MGP_CBAJ_G0002961.1 mouse_genomes_project 11 105849593 105861141 - Hoxb5os antisense antisense MGP_CBAJ_T0003166.1 MGP_CBAJ_G0002935.1 mouse_genomes_project 11 87450559 87469301 - Adap2os antisense antisense MGP_CBAJ_T0027803.1 MGP_CBAJ_G0017782.1 mouse_genomes_project 11 15769280 15772353 + MGP_CBAJ_P0027803 Fbxo48 protein_coding protein_coding MGP_CBAJ_T0027804.1 MGP_CBAJ_G0017782.1 mouse_genomes_project 11 15769315 15772676 + MGP_CBAJ_P0027804 Fbxo48 protein_coding protein_coding MGP_CBAJ_T0031865.1 MGP_CBAJ_G0018805.1 mouse_genomes_project 11 109090369 109091206 - MGP_CBAJ_P0031865 Gjd3 protein_coding protein_coding MGP_CBAJ_T0029735.1 MGP_CBAJ_G0018283.1 mouse_genomes_project 11 75661854 75663754 - MGP_CBAJ_P0029735 4933402P03Rik protein_coding protein_coding MGP_CBAJ_T0032031.1 MGP_CBAJ_G0018883.1 mouse_genomes_project 11 111050274 111081306 - MGP_CBAJ_P0032031 Zfp385c protein_coding protein_coding MGP_CBAJ_T0032032.1 MGP_CBAJ_G0018883.1 mouse_genomes_project 11 111052692 111082297 - Zfp385c protein_coding processed_transcript MGP_CBAJ_T0032033.1 MGP_CBAJ_G0018883.1 mouse_genomes_project 11 111053455 111093838 - MGP_CBAJ_P0032033 Zfp385c protein_coding protein_coding MGP_CBAJ_T0032034.1 MGP_CBAJ_G0018883.1 mouse_genomes_project 11 111061255 111125600 - MGP_CBAJ_P0032034 Zfp385c protein_coding protein_coding MGP_CBAJ_T0030729.1 MGP_CBAJ_G0018519.1 mouse_genomes_project 11 86396034 86416863 - MGP_CBAJ_P0030729 Wsb1 protein_coding protein_coding MGP_CBAJ_T0030730.1 MGP_CBAJ_G0018519.1 mouse_genomes_project 11 86396050 86399709 - Wsb1 protein_coding retained_intron MGP_CBAJ_T0030731.1 MGP_CBAJ_G0018519.1 mouse_genomes_project 11 86396938 86405343 - MGP_CBAJ_P0030731 Wsb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030732.1 MGP_CBAJ_G0018519.1 mouse_genomes_project 11 86396969 86399612 - Wsb1 protein_coding processed_transcript MGP_CBAJ_T0030733.1 MGP_CBAJ_G0018519.1 mouse_genomes_project 11 86399972 86416861 - MGP_CBAJ_P0030733 Wsb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030734.1 MGP_CBAJ_G0018519.1 mouse_genomes_project 11 86400084 86416662 - MGP_CBAJ_P0030734 Wsb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030735.1 MGP_CBAJ_G0018519.1 mouse_genomes_project 11 86400791 86413216 - Wsb1 protein_coding retained_intron MGP_CBAJ_T0031140.1 MGP_CBAJ_G0018629.1 mouse_genomes_project 11 95550141 95736873 + MGP_CBAJ_P0031140 Tex14 protein_coding protein_coding MGP_CBAJ_T0031141.1 MGP_CBAJ_G0018629.1 mouse_genomes_project 11 95580078 95654821 + MGP_CBAJ_P0031141 Tex14 protein_coding protein_coding MGP_CBAJ_T0031142.1 MGP_CBAJ_G0018629.1 mouse_genomes_project 11 95717544 95736007 + MGP_CBAJ_P0031142 Tex14 protein_coding protein_coding MGP_CBAJ_T0031143.1 MGP_CBAJ_G0018629.1 mouse_genomes_project 11 95719824 95736869 + MGP_CBAJ_P0031143 Tex14 protein_coding protein_coding MGP_CBAJ_T0031144.1 MGP_CBAJ_G0018629.1 mouse_genomes_project 11 95724073 95736716 + Tex14 protein_coding processed_transcript MGP_CBAJ_T0099918.1 MGP_CBAJ_G0038173.1 mouse_genomes_project 11 47997218 47997350 + Gm22284 snoRNA snoRNA MGP_CBAJ_T0012488.1 MGP_CBAJ_G0010600.1 mouse_genomes_project 11 68139178 68139411 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097914.1 MGP_CBAJ_G0036187.1 mouse_genomes_project 11 119443510 119443622 + Gm27595 rRNA rRNA MGP_CBAJ_T0032998.1 MGP_CBAJ_G0019087.1 mouse_genomes_project 11 127440385 127454715 - MGP_CBAJ_P0032998 Cd300ld protein_coding protein_coding MGP_CBAJ_T0032858.1 MGP_CBAJ_G0019055.1 mouse_genomes_project 11 121276703 121293325 + Arsg protein_coding processed_transcript MGP_CBAJ_T0032859.1 MGP_CBAJ_G0019055.1 mouse_genomes_project 11 121276703 121383871 + MGP_CBAJ_P0032859 Arsg protein_coding protein_coding MGP_CBAJ_T0032860.1 MGP_CBAJ_G0019055.1 mouse_genomes_project 11 121288348 121293223 + Arsg protein_coding processed_transcript MGP_CBAJ_T0032861.1 MGP_CBAJ_G0019055.1 mouse_genomes_project 11 121288931 121383876 + MGP_CBAJ_P0032861 Arsg protein_coding protein_coding MGP_CBAJ_T0032862.1 MGP_CBAJ_G0019055.1 mouse_genomes_project 11 121348780 121383876 + MGP_CBAJ_P0032862 Arsg protein_coding protein_coding MGP_CBAJ_T0028579.1 MGP_CBAJ_G0017985.1 mouse_genomes_project 11 54013408 54016368 - MGP_CBAJ_P0028579 Prop1 protein_coding protein_coding MGP_CBAJ_T0028580.1 MGP_CBAJ_G0017985.1 mouse_genomes_project 11 54013794 54015057 - Prop1 protein_coding retained_intron MGP_CBAJ_T0028581.1 MGP_CBAJ_G0017985.1 mouse_genomes_project 11 54014816 54016354 - MGP_CBAJ_P0028581 Prop1 protein_coding protein_coding MGP_CBAJ_T0012613.1 MGP_CBAJ_G0010725.1 mouse_genomes_project 11 128019361 128019520 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006111.1 MGP_CBAJ_G0005098.1 mouse_genomes_project 11 25072035 25095491 + Gm12069 lincRNA lincRNA MGP_CBAJ_T0033016.1 MGP_CBAJ_G0019094.1 mouse_genomes_project 11 127648024 127668659 + MGP_CBAJ_P0033016 Slc9a3r1 protein_coding protein_coding MGP_CBAJ_T0032521.1 MGP_CBAJ_G0018979.1 mouse_genomes_project 11 114114515 114126571 - MGP_CBAJ_P0032521 1700023F06Rik protein_coding protein_coding MGP_CBAJ_T0032522.1 MGP_CBAJ_G0018979.1 mouse_genomes_project 11 114114518 114126581 - MGP_CBAJ_P0032522 1700023F06Rik protein_coding protein_coding MGP_CBAJ_T0032523.1 MGP_CBAJ_G0018979.1 mouse_genomes_project 11 114114987 114126545 - MGP_CBAJ_P0032523 1700023F06Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0032524.1 MGP_CBAJ_G0018979.1 mouse_genomes_project 11 114115896 114126546 - MGP_CBAJ_P0032524 1700023F06Rik protein_coding protein_coding MGP_CBAJ_T0032525.1 MGP_CBAJ_G0018979.1 mouse_genomes_project 11 114116269 114126571 - 1700023F06Rik protein_coding retained_intron MGP_CBAJ_T0003112.1 MGP_CBAJ_G0002891.1 mouse_genomes_project 11 64248160 64256684 + Gm16062 antisense antisense MGP_CBAJ_T0009634.1 MGP_CBAJ_G0007772.1 mouse_genomes_project 11 113867354 113867428 - Mir6931 miRNA miRNA MGP_CBAJ_T0033799.1 MGP_CBAJ_G0019242.1 mouse_genomes_project 11 134017654 134018696 - protein_coding processed_transcript MGP_CBAJ_T0033800.1 MGP_CBAJ_G0019242.1 mouse_genomes_project 11 134017654 134020446 - MGP_CBAJ_P0033800 protein_coding protein_coding MGP_CBAJ_T0033801.1 MGP_CBAJ_G0019242.1 mouse_genomes_project 11 134017654 134020446 - MGP_CBAJ_P0033801 protein_coding protein_coding MGP_CBAJ_T0033802.1 MGP_CBAJ_G0019242.1 mouse_genomes_project 11 134017654 134020452 - MGP_CBAJ_P0033802 protein_coding protein_coding MGP_CBAJ_T0033803.1 MGP_CBAJ_G0019242.1 mouse_genomes_project 11 134017655 134020452 - MGP_CBAJ_P0033803 protein_coding protein_coding MGP_CBAJ_T0031947.1 MGP_CBAJ_G0018860.1 mouse_genomes_project 11 110452048 110455668 - MGP_CBAJ_P0031947 Krt36 protein_coding protein_coding MGP_CBAJ_T0012487.1 MGP_CBAJ_G0010599.1 mouse_genomes_project 11 67587517 67588720 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031112.1 MGP_CBAJ_G0018619.1 mouse_genomes_project 11 94755065 94824211 - MGP_CBAJ_P0031112 Cltc protein_coding protein_coding MGP_CBAJ_T0031113.1 MGP_CBAJ_G0018619.1 mouse_genomes_project 11 94755369 94824147 - MGP_CBAJ_P0031113 Cltc protein_coding protein_coding MGP_CBAJ_T0031114.1 MGP_CBAJ_G0018619.1 mouse_genomes_project 11 94756033 94764506 - MGP_CBAJ_P0031114 Cltc protein_coding protein_coding MGP_CBAJ_T0031115.1 MGP_CBAJ_G0018619.1 mouse_genomes_project 11 94761747 94763240 - Cltc protein_coding processed_transcript MGP_CBAJ_T0031116.1 MGP_CBAJ_G0018619.1 mouse_genomes_project 11 94785771 94789072 - Cltc protein_coding retained_intron MGP_CBAJ_T0031117.1 MGP_CBAJ_G0018619.1 mouse_genomes_project 11 94786787 94789041 - Cltc protein_coding processed_transcript MGP_CBAJ_T0030981.1 MGP_CBAJ_G0018593.1 mouse_genomes_project 11 91907789 91933688 - MGP_CBAJ_P0030981 Gm11437 protein_coding protein_coding MGP_CBAJ_T0028150.1 MGP_CBAJ_G0017860.1 mouse_genomes_project 11 32994593 32995906 + MGP_CBAJ_P0028150 protein_coding protein_coding MGP_CBAJ_T0031487.1 MGP_CBAJ_G0018712.1 mouse_genomes_project 11 105080578 105099736 + MGP_CBAJ_P0031487 Phb protein_coding protein_coding MGP_CBAJ_T0031488.1 MGP_CBAJ_G0018712.1 mouse_genomes_project 11 105080625 105085587 + Phb protein_coding processed_transcript MGP_CBAJ_T0031489.1 MGP_CBAJ_G0018712.1 mouse_genomes_project 11 105080635 105082561 + Phb protein_coding processed_transcript MGP_CBAJ_T0031490.1 MGP_CBAJ_G0018712.1 mouse_genomes_project 11 105080689 105098671 + MGP_CBAJ_P0031490 Phb protein_coding protein_coding MGP_CBAJ_T0031491.1 MGP_CBAJ_G0018712.1 mouse_genomes_project 11 105085394 105091173 + Phb protein_coding processed_transcript MGP_CBAJ_T0012607.1 MGP_CBAJ_G0010719.1 mouse_genomes_project 11 125965460 125966262 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011180.1 MGP_CBAJ_G0009318.1 mouse_genomes_project 11 79045920 79046112 - Gm22075 misc_RNA misc_RNA MGP_CBAJ_T0029387.1 MGP_CBAJ_G0018202.1 mouse_genomes_project 11 70298458 70306683 - MGP_CBAJ_P0029387 1700086D15Rik protein_coding protein_coding MGP_CBAJ_T0029388.1 MGP_CBAJ_G0018202.1 mouse_genomes_project 11 70298458 70306682 - MGP_CBAJ_P0029388 1700086D15Rik protein_coding protein_coding MGP_CBAJ_T0009593.1 MGP_CBAJ_G0007731.1 mouse_genomes_project 11 81717313 81717379 + Mir132 miRNA miRNA MGP_CBAJ_T0028742.1 MGP_CBAJ_G0018030.1 mouse_genomes_project 11 57395943 57403252 + MGP_CBAJ_P0028742 Irf1 protein_coding protein_coding MGP_CBAJ_T0028743.1 MGP_CBAJ_G0018030.1 mouse_genomes_project 11 57395977 57401032 + MGP_CBAJ_P0028743 Irf1 protein_coding protein_coding MGP_CBAJ_T0028744.1 MGP_CBAJ_G0018030.1 mouse_genomes_project 11 57395980 57404303 + MGP_CBAJ_P0028744 Irf1 protein_coding protein_coding MGP_CBAJ_T0028745.1 MGP_CBAJ_G0018030.1 mouse_genomes_project 11 57396000 57402307 + Irf1 protein_coding processed_transcript MGP_CBAJ_T0028746.1 MGP_CBAJ_G0018030.1 mouse_genomes_project 11 57396034 57400014 + MGP_CBAJ_P0028746 Irf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028747.1 MGP_CBAJ_G0018030.1 mouse_genomes_project 11 57396405 57398867 + MGP_CBAJ_P0028747 Irf1 protein_coding protein_coding MGP_CBAJ_T0028748.1 MGP_CBAJ_G0018030.1 mouse_genomes_project 11 57396415 57400123 + MGP_CBAJ_P0028748 Irf1 protein_coding protein_coding MGP_CBAJ_T0028749.1 MGP_CBAJ_G0018030.1 mouse_genomes_project 11 57396423 57403252 + MGP_CBAJ_P0028749 Irf1 protein_coding protein_coding MGP_CBAJ_T0028750.1 MGP_CBAJ_G0018030.1 mouse_genomes_project 11 57396437 57399886 + MGP_CBAJ_P0028750 Irf1 protein_coding protein_coding MGP_CBAJ_T0028752.1 MGP_CBAJ_G0018030.1 mouse_genomes_project 11 57399081 57400059 + Irf1 protein_coding retained_intron MGP_CBAJ_T0032111.1 MGP_CBAJ_G0018901.1 mouse_genomes_project 11 111586099 111616352 - Fam134c protein_coding processed_transcript MGP_CBAJ_T0032112.1 MGP_CBAJ_G0018901.1 mouse_genomes_project 11 111586290 111616352 - MGP_CBAJ_P0032112 Fam134c protein_coding protein_coding MGP_CBAJ_T0032113.1 MGP_CBAJ_G0018901.1 mouse_genomes_project 11 111586296 111616166 - MGP_CBAJ_P0032113 Fam134c protein_coding protein_coding MGP_CBAJ_T0032114.1 MGP_CBAJ_G0018901.1 mouse_genomes_project 11 111587777 111616224 - Fam134c protein_coding processed_transcript MGP_CBAJ_T0032115.1 MGP_CBAJ_G0018901.1 mouse_genomes_project 11 111588360 111616352 - Fam134c protein_coding processed_transcript MGP_CBAJ_T0006251.1 MGP_CBAJ_G0005205.1 mouse_genomes_project 11 118424416 118425449 - Gm11707 lincRNA lincRNA MGP_CBAJ_T0009555.1 MGP_CBAJ_G0007693.1 mouse_genomes_project 11 53032168 53032266 + Mir340 miRNA miRNA MGP_CBAJ_T0009576.1 MGP_CBAJ_G0007714.1 mouse_genomes_project 11 75293691 75293769 - Gm27493 miRNA miRNA MGP_CBAJ_T0006151.1 MGP_CBAJ_G0005132.1 mouse_genomes_project 11 57913600 57951384 - 4933405E24Rik lincRNA lincRNA MGP_CBAJ_T0029139.1 MGP_CBAJ_G0018152.1 mouse_genomes_project 11 65342286 65345830 + MGP_CBAJ_P0029139 Smcr8 protein_coding protein_coding MGP_CBAJ_T0029140.1 MGP_CBAJ_G0018152.1 mouse_genomes_project 11 65342287 65352927 + MGP_CBAJ_P0029140 Smcr8 protein_coding protein_coding MGP_CBAJ_T0012619.1 MGP_CBAJ_G0010731.1 mouse_genomes_project 11 129296517 129296727 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0030844.1 MGP_CBAJ_G0018550.1 mouse_genomes_project 11 89630484 89632099 + MGP_CBAJ_P0030844 Ccl8 protein_coding protein_coding MGP_CBAJ_T0097904.1 MGP_CBAJ_G0036177.1 mouse_genomes_project 11 61877260 61877379 + n-R5s69 rRNA rRNA MGP_CBAJ_T0029341.1 MGP_CBAJ_G0018189.1 mouse_genomes_project 11 67590819 67635854 - Zfp286 protein_coding processed_transcript MGP_CBAJ_T0029342.1 MGP_CBAJ_G0018189.1 mouse_genomes_project 11 67625271 67636336 - MGP_CBAJ_P0029342 Zfp286 protein_coding protein_coding MGP_CBAJ_T0029343.1 MGP_CBAJ_G0018189.1 mouse_genomes_project 11 67626489 67636297 - MGP_CBAJ_P0029343 Zfp286 protein_coding protein_coding MGP_CBAJ_T0029344.1 MGP_CBAJ_G0018189.1 mouse_genomes_project 11 67627614 67636291 - Zfp286 protein_coding processed_transcript MGP_CBAJ_T0029345.1 MGP_CBAJ_G0018189.1 mouse_genomes_project 11 67627623 67631034 - Zfp286 protein_coding processed_transcript MGP_CBAJ_T0029346.1 MGP_CBAJ_G0018189.1 mouse_genomes_project 11 67630398 67636283 - Zfp286 protein_coding processed_transcript MGP_CBAJ_T0029347.1 MGP_CBAJ_G0018189.1 mouse_genomes_project 11 67630398 67636260 - Zfp286 protein_coding processed_transcript MGP_CBAJ_T0029348.1 MGP_CBAJ_G0018189.1 mouse_genomes_project 11 67634448 67636297 - Zfp286 protein_coding processed_transcript MGP_CBAJ_T0003094.1 MGP_CBAJ_G0002876.1 mouse_genomes_project 11 58102116 58115588 - Gm12224 antisense antisense MGP_CBAJ_T0003095.1 MGP_CBAJ_G0002876.1 mouse_genomes_project 11 58106396 58115539 - Gm12224 antisense antisense MGP_CBAJ_T0012325.1 MGP_CBAJ_G0010437.1 mouse_genomes_project 11 4373594 4374580 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016889.1 MGP_CBAJ_G0014887.1 mouse_genomes_project 11 641432 647710 + Gm11946 processed_transcript processed_transcript MGP_CBAJ_T0016890.1 MGP_CBAJ_G0014887.1 mouse_genomes_project 11 642223 648132 + Gm11946 processed_transcript processed_transcript MGP_CBAJ_T0006128.1 MGP_CBAJ_G0005110.1 mouse_genomes_project 11 35177492 35179106 + Gm12121 lincRNA lincRNA MGP_CBAJ_T0028934.1 MGP_CBAJ_G0018085.1 mouse_genomes_project 11 62815074 62818240 - MGP_CBAJ_P0028934 protein_coding protein_coding MGP_CBAJ_T0098679.1 MGP_CBAJ_G0036934.1 mouse_genomes_project 11 35990340 35990447 + Gm25799 snRNA snRNA MGP_CBAJ_T0006101.1 MGP_CBAJ_G0005089.1 mouse_genomes_project 11 22695430 22712349 + 1700061J23Rik lincRNA lincRNA MGP_CBAJ_T0098708.1 MGP_CBAJ_G0036963.1 mouse_genomes_project 11 90964845 90965036 + Gm23444 snRNA snRNA MGP_CBAJ_T0097905.1 MGP_CBAJ_G0036178.1 mouse_genomes_project 11 64251217 64251354 + Gm24939 rRNA rRNA MGP_CBAJ_T0030266.1 MGP_CBAJ_G0018416.1 mouse_genomes_project 11 80796848 80797843 + MGP_CBAJ_P0030266 Olfr412 protein_coding protein_coding MGP_CBAJ_T0030885.1 MGP_CBAJ_G0018560.1 mouse_genomes_project 11 90471460 90507307 + MGP_CBAJ_P0030885 Unc45b protein_coding protein_coding MGP_CBAJ_T0030886.1 MGP_CBAJ_G0018560.1 mouse_genomes_project 11 90472163 90507307 + MGP_CBAJ_P0030886 Unc45b protein_coding protein_coding MGP_CBAJ_T0030887.1 MGP_CBAJ_G0018560.1 mouse_genomes_project 11 90472163 90507307 + MGP_CBAJ_P0030887 Unc45b protein_coding protein_coding MGP_CBAJ_T0030888.1 MGP_CBAJ_G0018560.1 mouse_genomes_project 11 90493918 90494705 + Unc45b protein_coding processed_transcript MGP_CBAJ_T0030889.1 MGP_CBAJ_G0018560.1 mouse_genomes_project 11 90497447 90501555 + Unc45b protein_coding processed_transcript MGP_CBAJ_T0030209.1 MGP_CBAJ_G0018384.1 mouse_genomes_project 11 79555984 79594732 + MGP_CBAJ_P0030209 Trpv3 protein_coding protein_coding MGP_CBAJ_T0029447.1 MGP_CBAJ_G0018218.1 mouse_genomes_project 11 72901052 73138718 + Gas7 protein_coding processed_transcript MGP_CBAJ_T0029448.1 MGP_CBAJ_G0018218.1 mouse_genomes_project 11 73011306 73049355 + Gas7 protein_coding processed_transcript MGP_CBAJ_T0029449.1 MGP_CBAJ_G0018218.1 mouse_genomes_project 11 73050322 73072410 + Gas7 protein_coding processed_transcript MGP_CBAJ_T0029450.1 MGP_CBAJ_G0018218.1 mouse_genomes_project 11 73050358 73169591 + MGP_CBAJ_P0029450 Gas7 protein_coding protein_coding MGP_CBAJ_T0029451.1 MGP_CBAJ_G0018218.1 mouse_genomes_project 11 73063510 73160310 + MGP_CBAJ_P0029451 Gas7 protein_coding unknown_likely_coding MGP_CBAJ_T0029452.1 MGP_CBAJ_G0018218.1 mouse_genomes_project 11 73063552 73143939 + Gas7 protein_coding processed_transcript MGP_CBAJ_T0029453.1 MGP_CBAJ_G0018218.1 mouse_genomes_project 11 73063562 73138703 + Gas7 protein_coding processed_transcript MGP_CBAJ_T0029454.1 MGP_CBAJ_G0018218.1 mouse_genomes_project 11 73125963 73160547 + Gas7 protein_coding processed_transcript MGP_CBAJ_T0029456.1 MGP_CBAJ_G0018218.1 mouse_genomes_project 11 73159030 73160423 + Gas7 protein_coding processed_transcript MGP_CBAJ_T0030838.1 MGP_CBAJ_G0018546.1 mouse_genomes_project 11 89542584 89544464 + MGP_CBAJ_P0030838 Ccl2 protein_coding protein_coding MGP_CBAJ_T0030839.1 MGP_CBAJ_G0018546.1 mouse_genomes_project 11 89542623 89544461 + Ccl2 protein_coding retained_intron MGP_CBAJ_T0028854.1 MGP_CBAJ_G0018055.1 mouse_genomes_project 11 59114507 59183835 - MGP_CBAJ_P0028854 Fat2 protein_coding unknown_likely_coding MGP_CBAJ_T0030100.1 MGP_CBAJ_G0018355.1 mouse_genomes_project 11 78289149 78290524 - 4933427D14Rik protein_coding processed_transcript MGP_CBAJ_T0030101.1 MGP_CBAJ_G0018355.1 mouse_genomes_project 11 78289149 78347273 - MGP_CBAJ_P0030101 4933427D14Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0030102.1 MGP_CBAJ_G0018355.1 mouse_genomes_project 11 78289150 78347081 - MGP_CBAJ_P0030102 4933427D14Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0030103.1 MGP_CBAJ_G0018355.1 mouse_genomes_project 11 78289317 78343585 - MGP_CBAJ_P0030103 4933427D14Rik protein_coding protein_coding MGP_CBAJ_T0030104.1 MGP_CBAJ_G0018355.1 mouse_genomes_project 11 78290613 78310802 - 4933427D14Rik protein_coding processed_transcript MGP_CBAJ_T0030105.1 MGP_CBAJ_G0018355.1 mouse_genomes_project 11 78335200 78347245 - MGP_CBAJ_P0030105 4933427D14Rik protein_coding protein_coding MGP_CBAJ_T0030106.1 MGP_CBAJ_G0018355.1 mouse_genomes_project 11 78338188 78347034 - 4933427D14Rik protein_coding processed_transcript MGP_CBAJ_T0030107.1 MGP_CBAJ_G0018355.1 mouse_genomes_project 11 78338435 78342426 - 4933427D14Rik protein_coding processed_transcript MGP_CBAJ_T0033678.1 MGP_CBAJ_G0019220.1 mouse_genomes_project 11 133726971 133735043 - Pde6g protein_coding processed_transcript MGP_CBAJ_T0033679.1 MGP_CBAJ_G0019220.1 mouse_genomes_project 11 133726990 133735061 - Pde6g protein_coding processed_transcript MGP_CBAJ_T0033680.1 MGP_CBAJ_G0019220.1 mouse_genomes_project 11 133726992 133735109 - MGP_CBAJ_P0033680 Pde6g protein_coding protein_coding MGP_CBAJ_T0012311.1 MGP_CBAJ_G0010423.1 mouse_genomes_project 11 833688 834585 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006132.1 MGP_CBAJ_G0005114.1 mouse_genomes_project 11 41707061 42070903 + lincRNA lincRNA MGP_CBAJ_T0029054.1 MGP_CBAJ_G0018135.1 mouse_genomes_project 11 64278734 64324014 + Nt5m protein_coding processed_transcript MGP_CBAJ_T0029055.1 MGP_CBAJ_G0018135.1 mouse_genomes_project 11 64278734 64328440 + Nt5m protein_coding processed_transcript MGP_CBAJ_T0029056.1 MGP_CBAJ_G0018135.1 mouse_genomes_project 11 64288449 64324014 + MGP_CBAJ_P0029056 Nt5m protein_coding protein_coding MGP_CBAJ_T0029057.1 MGP_CBAJ_G0018135.1 mouse_genomes_project 11 64288480 64324014 + Nt5m protein_coding processed_transcript MGP_CBAJ_T0027402.1 MGP_CBAJ_G0017691.1 mouse_genomes_project 11 785733 826629 + MGP_CBAJ_P0027402 Morc2a protein_coding protein_coding MGP_CBAJ_T0027403.1 MGP_CBAJ_G0017691.1 mouse_genomes_project 11 785998 805651 + MGP_CBAJ_P0027403 Morc2a protein_coding protein_coding MGP_CBAJ_T0027404.1 MGP_CBAJ_G0017691.1 mouse_genomes_project 11 786492 826736 + MGP_CBAJ_P0027404 Morc2a protein_coding protein_coding MGP_CBAJ_T0027405.1 MGP_CBAJ_G0017691.1 mouse_genomes_project 11 816147 820166 + Morc2a protein_coding processed_transcript MGP_CBAJ_T0027406.1 MGP_CBAJ_G0017691.1 mouse_genomes_project 11 816507 817392 + Morc2a protein_coding processed_transcript MGP_CBAJ_T0027407.1 MGP_CBAJ_G0017691.1 mouse_genomes_project 11 816602 819948 + Morc2a protein_coding processed_transcript MGP_CBAJ_T0032688.1 MGP_CBAJ_G0019020.1 mouse_genomes_project 11 117595358 117602777 + MGP_CBAJ_P0032688 Psmc5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032689.1 MGP_CBAJ_G0019020.1 mouse_genomes_project 11 117595358 117602777 + MGP_CBAJ_P0032689 Psmc5 protein_coding protein_coding MGP_CBAJ_T0012526.1 MGP_CBAJ_G0010638.1 mouse_genomes_project 11 85161709 85161952 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0003065.1 MGP_CBAJ_G0002848.1 mouse_genomes_project 11 29809317 29811542 + Gm12089 antisense antisense MGP_CBAJ_T0101530.1 MGP_CBAJ_G0039562.1 mouse_genomes_project 11 5823289 5824978 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0031912.1 MGP_CBAJ_G0018827.1 mouse_genomes_project 11 109783498 109784539 - MGP_CBAJ_P0031912 Krtap1-5 protein_coding protein_coding MGP_CBAJ_T0029709.1 MGP_CBAJ_G0018274.1 mouse_genomes_project 11 75499000 75513755 - MGP_CBAJ_P0029709 Tnfsfm13 protein_coding protein_coding MGP_CBAJ_T0029712.1 MGP_CBAJ_G0018274.1 mouse_genomes_project 11 75499471 75513467 - MGP_CBAJ_P0029712 Tnfsfm13 protein_coding protein_coding MGP_CBAJ_T0029713.1 MGP_CBAJ_G0018274.1 mouse_genomes_project 11 75499654 75513466 - MGP_CBAJ_P0029713 Tnfsfm13 protein_coding protein_coding MGP_CBAJ_T0029483.1 MGP_CBAJ_G0018227.1 mouse_genomes_project 11 74017662 74086347 + MGP_CBAJ_P0029483 Pik3r5 protein_coding protein_coding MGP_CBAJ_T0029484.1 MGP_CBAJ_G0018227.1 mouse_genomes_project 11 74017666 74065289 + Pik3r5 protein_coding processed_transcript MGP_CBAJ_T0029485.1 MGP_CBAJ_G0018227.1 mouse_genomes_project 11 74017701 74025915 + Pik3r5 protein_coding processed_transcript MGP_CBAJ_T0029486.1 MGP_CBAJ_G0018227.1 mouse_genomes_project 11 74062319 74084753 + Pik3r5 protein_coding processed_transcript MGP_CBAJ_T0029487.1 MGP_CBAJ_G0018227.1 mouse_genomes_project 11 74064005 74081834 + Pik3r5 protein_coding processed_transcript MGP_CBAJ_T0016883.1 MGP_CBAJ_G0014884.1 mouse_genomes_project 11 391511 417193 - Gm12592 processed_transcript processed_transcript MGP_CBAJ_T0030352.1 MGP_CBAJ_G0018436.1 mouse_genomes_project 11 82046618 82056626 + Tlcd2 protein_coding processed_transcript MGP_CBAJ_T0030353.1 MGP_CBAJ_G0018436.1 mouse_genomes_project 11 82054997 82060190 + MGP_CBAJ_P0030353 Tlcd2 protein_coding protein_coding MGP_CBAJ_T0030354.1 MGP_CBAJ_G0018436.1 mouse_genomes_project 11 82054997 82060432 + MGP_CBAJ_P0030354 Tlcd2 protein_coding protein_coding MGP_CBAJ_T0030355.1 MGP_CBAJ_G0018436.1 mouse_genomes_project 11 82055629 82057048 + Tlcd2 protein_coding retained_intron MGP_CBAJ_T0017031.1 MGP_CBAJ_G0014962.1 mouse_genomes_project 11 132710504 132730845 + Gm11762 processed_transcript processed_transcript MGP_CBAJ_T0031323.1 MGP_CBAJ_G0018672.1 mouse_genomes_project 11 103084655 103091045 - MGP_CBAJ_P0031323 Nme2 protein_coding protein_coding MGP_CBAJ_T0031324.1 MGP_CBAJ_G0018672.1 mouse_genomes_project 11 103084658 103090569 - MGP_CBAJ_P0031324 Nme2 protein_coding protein_coding MGP_CBAJ_T0030524.1 MGP_CBAJ_G0018472.1 mouse_genomes_project 11 84393914 84399186 - MGP_CBAJ_P0030524 Trp53i13 protein_coding protein_coding MGP_CBAJ_T0030525.1 MGP_CBAJ_G0018472.1 mouse_genomes_project 11 84394426 84398579 - Trp53i13 protein_coding processed_transcript MGP_CBAJ_T0030526.1 MGP_CBAJ_G0018472.1 mouse_genomes_project 11 84394785 84398851 - Trp53i13 protein_coding processed_transcript MGP_CBAJ_T0030527.1 MGP_CBAJ_G0018472.1 mouse_genomes_project 11 84394916 84401478 - MGP_CBAJ_P0030527 Trp53i13 protein_coding protein_coding MGP_CBAJ_T0030528.1 MGP_CBAJ_G0018472.1 mouse_genomes_project 11 84398559 84401727 - Trp53i13 protein_coding processed_transcript MGP_CBAJ_T0033091.1 MGP_CBAJ_G0019111.1 mouse_genomes_project 11 128016759 128018153 - MGP_CBAJ_P0033091 Nt5c protein_coding protein_coding MGP_CBAJ_T0033092.1 MGP_CBAJ_G0019111.1 mouse_genomes_project 11 128016759 128018200 - MGP_CBAJ_P0033092 Nt5c protein_coding protein_coding MGP_CBAJ_T0033093.1 MGP_CBAJ_G0019111.1 mouse_genomes_project 11 128016977 128018189 - Nt5c protein_coding retained_intron MGP_CBAJ_T0033094.1 MGP_CBAJ_G0019111.1 mouse_genomes_project 11 128017039 128017542 - Nt5c protein_coding retained_intron MGP_CBAJ_T0033095.1 MGP_CBAJ_G0019111.1 mouse_genomes_project 11 128017110 128017711 - Nt5c protein_coding retained_intron MGP_CBAJ_T0032670.1 MGP_CBAJ_G0019016.1 mouse_genomes_project 11 117492942 117536432 - Strada protein_coding processed_transcript MGP_CBAJ_T0032671.1 MGP_CBAJ_G0019016.1 mouse_genomes_project 11 117492963 117523833 - MGP_CBAJ_P0032671 Strada protein_coding protein_coding MGP_CBAJ_T0032672.1 MGP_CBAJ_G0019016.1 mouse_genomes_project 11 117493460 117523859 - MGP_CBAJ_P0032672 Strada protein_coding protein_coding MGP_CBAJ_T0032673.1 MGP_CBAJ_G0019016.1 mouse_genomes_project 11 117498087 117523836 - MGP_CBAJ_P0032673 Strada protein_coding protein_coding MGP_CBAJ_T0032674.1 MGP_CBAJ_G0019016.1 mouse_genomes_project 11 117513683 117523869 - MGP_CBAJ_P0032674 Strada protein_coding protein_coding MGP_CBAJ_T0012368.1 MGP_CBAJ_G0010480.1 mouse_genomes_project 11 20563807 20563987 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101545.1 MGP_CBAJ_G0039577.1 mouse_genomes_project 11 80072580 80073139 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0029416.1 MGP_CBAJ_G0018210.1 mouse_genomes_project 11 72396645 72411344 - MGP_CBAJ_P0029416 Adprm protein_coding nonsense_mediated_decay MGP_CBAJ_T0029417.1 MGP_CBAJ_G0018210.1 mouse_genomes_project 11 72396781 72411320 - MGP_CBAJ_P0029417 Adprm protein_coding protein_coding MGP_CBAJ_T0029418.1 MGP_CBAJ_G0018210.1 mouse_genomes_project 11 72397009 72399268 - Adprm protein_coding processed_transcript MGP_CBAJ_T0029419.1 MGP_CBAJ_G0018210.1 mouse_genomes_project 11 72400436 72411335 - Adprm protein_coding processed_transcript MGP_CBAJ_T0029420.1 MGP_CBAJ_G0018210.1 mouse_genomes_project 11 72400477 72411341 - Adprm protein_coding processed_transcript MGP_CBAJ_T0029421.1 MGP_CBAJ_G0018210.1 mouse_genomes_project 11 72400622 72411339 - Adprm protein_coding processed_transcript MGP_CBAJ_T0003299.1 MGP_CBAJ_G0003041.1 mouse_genomes_project 11 135281404 135282062 - Gm15643 antisense antisense MGP_CBAJ_T0028513.1 MGP_CBAJ_G0017970.1 mouse_genomes_project 11 53199958 53220033 + MGP_CBAJ_P0028513 Mgat4b protein_coding protein_coding MGP_CBAJ_T0028514.1 MGP_CBAJ_G0017970.1 mouse_genomes_project 11 53214268 53224042 + MGP_CBAJ_P0028514 Mgat4b protein_coding protein_coding MGP_CBAJ_T0028515.1 MGP_CBAJ_G0017970.1 mouse_genomes_project 11 53219673 53224042 + MGP_CBAJ_P0028515 Mgat4b protein_coding nonsense_mediated_decay MGP_CBAJ_T0028516.1 MGP_CBAJ_G0017970.1 mouse_genomes_project 11 53219681 53220706 + Mgat4b protein_coding retained_intron MGP_CBAJ_T0028517.1 MGP_CBAJ_G0017970.1 mouse_genomes_project 11 53222961 53223856 + Mgat4b protein_coding retained_intron MGP_CBAJ_T0032082.1 MGP_CBAJ_G0018895.1 mouse_genomes_project 11 111494108 111506061 + Atp6v0a1 protein_coding processed_transcript MGP_CBAJ_T0032083.1 MGP_CBAJ_G0018895.1 mouse_genomes_project 11 111494108 111534863 + Atp6v0a1 protein_coding processed_transcript MGP_CBAJ_T0032084.1 MGP_CBAJ_G0018895.1 mouse_genomes_project 11 111494108 111552492 + MGP_CBAJ_P0032084 Atp6v0a1 protein_coding protein_coding MGP_CBAJ_T0032085.1 MGP_CBAJ_G0018895.1 mouse_genomes_project 11 111494108 111553787 + MGP_CBAJ_P0032085 Atp6v0a1 protein_coding protein_coding MGP_CBAJ_T0032086.1 MGP_CBAJ_G0018895.1 mouse_genomes_project 11 111494143 111553781 + MGP_CBAJ_P0032086 Atp6v0a1 protein_coding protein_coding MGP_CBAJ_T0032087.1 MGP_CBAJ_G0018895.1 mouse_genomes_project 11 111495313 111505166 + MGP_CBAJ_P0032087 Atp6v0a1 protein_coding protein_coding MGP_CBAJ_T0032088.1 MGP_CBAJ_G0018895.1 mouse_genomes_project 11 111496477 111553787 + MGP_CBAJ_P0032088 Atp6v0a1 protein_coding protein_coding MGP_CBAJ_T0032089.1 MGP_CBAJ_G0018895.1 mouse_genomes_project 11 111505787 111512185 + Atp6v0a1 protein_coding processed_transcript MGP_CBAJ_T0032090.1 MGP_CBAJ_G0018895.1 mouse_genomes_project 11 111529885 111539305 + Atp6v0a1 protein_coding processed_transcript MGP_CBAJ_T0032091.1 MGP_CBAJ_G0018895.1 mouse_genomes_project 11 111533854 111534866 + Atp6v0a1 protein_coding processed_transcript MGP_CBAJ_T0030785.1 MGP_CBAJ_G0018533.1 mouse_genomes_project 11 87480382 87497007 + MGP_CBAJ_P0030785 Rnf135 protein_coding protein_coding MGP_CBAJ_T0030786.1 MGP_CBAJ_G0018533.1 mouse_genomes_project 11 87480754 87485170 + Rnf135 protein_coding processed_transcript MGP_CBAJ_T0006152.1 MGP_CBAJ_G0005133.1 mouse_genomes_project 11 61671428 61673527 + Gm12243 lincRNA lincRNA MGP_CBAJ_T0029438.1 MGP_CBAJ_G0018216.1 mouse_genomes_project 11 72694332 72732904 + MGP_CBAJ_P0029438 Myh8 protein_coding protein_coding MGP_CBAJ_T0029439.1 MGP_CBAJ_G0018216.1 mouse_genomes_project 11 72694626 72716289 + Myh8 protein_coding retained_intron MGP_CBAJ_T0029440.1 MGP_CBAJ_G0018216.1 mouse_genomes_project 11 72694626 72701510 + MGP_CBAJ_P0029440 Myh8 protein_coding protein_coding MGP_CBAJ_T0029441.1 MGP_CBAJ_G0018216.1 mouse_genomes_project 11 72697197 72713220 + Myh8 protein_coding retained_intron MGP_CBAJ_T0029376.1 MGP_CBAJ_G0018200.1 mouse_genomes_project 11 70104559 70128285 + MGP_CBAJ_P0029376 Elac2 protein_coding protein_coding MGP_CBAJ_T0029377.1 MGP_CBAJ_G0018200.1 mouse_genomes_project 11 70104592 70127544 + MGP_CBAJ_P0029377 Elac2 protein_coding protein_coding MGP_CBAJ_T0029378.1 MGP_CBAJ_G0018200.1 mouse_genomes_project 11 70104593 70106163 + Elac2 protein_coding processed_transcript MGP_CBAJ_T0029379.1 MGP_CBAJ_G0018200.1 mouse_genomes_project 11 70104595 70127816 + MGP_CBAJ_P0029379 Elac2 protein_coding protein_coding MGP_CBAJ_T0029380.1 MGP_CBAJ_G0018200.1 mouse_genomes_project 11 70104612 70128283 + Elac2 protein_coding processed_transcript MGP_CBAJ_T0029381.1 MGP_CBAJ_G0018200.1 mouse_genomes_project 11 70110976 70117992 + MGP_CBAJ_P0029381 Elac2 protein_coding protein_coding MGP_CBAJ_T0029382.1 MGP_CBAJ_G0018200.1 mouse_genomes_project 11 70126551 70128104 + Elac2 protein_coding processed_transcript MGP_CBAJ_T0101533.1 MGP_CBAJ_G0039565.1 mouse_genomes_project 11 51888157 51889614 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0003049.1 MGP_CBAJ_G0002837.1 mouse_genomes_project 11 9964751 9966058 - Gm12000 antisense antisense MGP_CBAJ_T0012534.1 MGP_CBAJ_G0010646.1 mouse_genomes_project 11 87157215 87157362 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0032163.1 MGP_CBAJ_G0018913.1 mouse_genomes_project 11 111821419 111835410 - Becn1 protein_coding retained_intron MGP_CBAJ_T0032164.1 MGP_CBAJ_G0018913.1 mouse_genomes_project 11 111821419 111835418 - Becn1 protein_coding retained_intron MGP_CBAJ_T0032165.1 MGP_CBAJ_G0018913.1 mouse_genomes_project 11 111821419 111835444 - MGP_CBAJ_P0032165 Becn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032166.1 MGP_CBAJ_G0018913.1 mouse_genomes_project 11 111821421 111835432 - MGP_CBAJ_P0032166 Becn1 protein_coding protein_coding MGP_CBAJ_T0032167.1 MGP_CBAJ_G0018913.1 mouse_genomes_project 11 111822033 111835395 - MGP_CBAJ_P0032167 Becn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032168.1 MGP_CBAJ_G0018913.1 mouse_genomes_project 11 111822045 111827199 - Becn1 protein_coding retained_intron MGP_CBAJ_T0032169.1 MGP_CBAJ_G0018913.1 mouse_genomes_project 11 111823037 111825656 - Becn1 protein_coding processed_transcript MGP_CBAJ_T0032170.1 MGP_CBAJ_G0018913.1 mouse_genomes_project 11 111823641 111834895 - MGP_CBAJ_P0032170 Becn1 protein_coding protein_coding MGP_CBAJ_T0032171.1 MGP_CBAJ_G0018913.1 mouse_genomes_project 11 111824540 111829465 - MGP_CBAJ_P0032171 Becn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032172.1 MGP_CBAJ_G0018913.1 mouse_genomes_project 11 111824656 111835396 - MGP_CBAJ_P0032172 Becn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032173.1 MGP_CBAJ_G0018913.1 mouse_genomes_project 11 111824687 111828594 - Becn1 protein_coding retained_intron MGP_CBAJ_T0032174.1 MGP_CBAJ_G0018913.1 mouse_genomes_project 11 111828704 111835364 - MGP_CBAJ_P0032174 Becn1 protein_coding protein_coding MGP_CBAJ_T0032175.1 MGP_CBAJ_G0018913.1 mouse_genomes_project 11 111829064 111835407 - MGP_CBAJ_P0032175 Becn1 protein_coding protein_coding MGP_CBAJ_T0032176.1 MGP_CBAJ_G0018913.1 mouse_genomes_project 11 111829383 111835398 - Becn1 protein_coding retained_intron MGP_CBAJ_T0032177.1 MGP_CBAJ_G0018913.1 mouse_genomes_project 11 111831234 111835413 - Becn1 protein_coding processed_transcript MGP_CBAJ_T0032178.1 MGP_CBAJ_G0018913.1 mouse_genomes_project 11 111834618 111835399 - Becn1 protein_coding retained_intron MGP_CBAJ_T0027611.1 MGP_CBAJ_G0017739.1 mouse_genomes_project 11 3402449 3408558 - MGP_CBAJ_P0027611 Pold2 protein_coding protein_coding MGP_CBAJ_T0027612.1 MGP_CBAJ_G0017739.1 mouse_genomes_project 11 3402457 3403461 - Pold2 protein_coding retained_intron MGP_CBAJ_T0027613.1 MGP_CBAJ_G0017739.1 mouse_genomes_project 11 3404349 3407932 - MGP_CBAJ_P0027613 Pold2 protein_coding protein_coding MGP_CBAJ_T0027614.1 MGP_CBAJ_G0017739.1 mouse_genomes_project 11 3404386 3407034 - Pold2 protein_coding retained_intron MGP_CBAJ_T0027615.1 MGP_CBAJ_G0017739.1 mouse_genomes_project 11 3405439 3408478 - Pold2 protein_coding processed_transcript MGP_CBAJ_T0012505.1 MGP_CBAJ_G0010617.1 mouse_genomes_project 11 76789019 76789292 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0027648.1 MGP_CBAJ_G0017748.1 mouse_genomes_project 11 3864063 3871763 - MGP_CBAJ_P0027648 Tmed4 protein_coding protein_coding MGP_CBAJ_T0027649.1 MGP_CBAJ_G0017748.1 mouse_genomes_project 11 3865473 3871763 - Tmed4 protein_coding retained_intron MGP_CBAJ_T0027650.1 MGP_CBAJ_G0017748.1 mouse_genomes_project 11 3870633 3871758 - MGP_CBAJ_P0027650 Tmed4 protein_coding protein_coding MGP_CBAJ_T0012462.1 MGP_CBAJ_G0010574.1 mouse_genomes_project 11 59357476 59357646 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031546.1 MGP_CBAJ_G0018733.1 mouse_genomes_project 11 105879330 105906620 + MGP_CBAJ_P0031546 Hoxb3 protein_coding protein_coding MGP_CBAJ_T0031547.1 MGP_CBAJ_G0018733.1 mouse_genomes_project 11 105884096 105902963 + MGP_CBAJ_P0031547 Hoxb3 protein_coding protein_coding MGP_CBAJ_T0031548.1 MGP_CBAJ_G0018733.1 mouse_genomes_project 11 105896991 105900457 + Hoxb3 protein_coding processed_transcript MGP_CBAJ_T0031549.1 MGP_CBAJ_G0018733.1 mouse_genomes_project 11 105902430 105905201 + MGP_CBAJ_P0031549 Hoxb3 protein_coding protein_coding MGP_CBAJ_T0032690.1 MGP_CBAJ_G0019021.1 mouse_genomes_project 11 117602835 117607456 - MGP_CBAJ_P0032690 Smarcd2 protein_coding protein_coding MGP_CBAJ_T0032691.1 MGP_CBAJ_G0019021.1 mouse_genomes_project 11 117602835 117612632 - MGP_CBAJ_P0032691 Smarcd2 protein_coding protein_coding MGP_CBAJ_T0032692.1 MGP_CBAJ_G0019021.1 mouse_genomes_project 11 117603370 117605319 - Smarcd2 protein_coding retained_intron MGP_CBAJ_T0032693.1 MGP_CBAJ_G0019021.1 mouse_genomes_project 11 117603455 117604593 - Smarcd2 protein_coding retained_intron MGP_CBAJ_T0032694.1 MGP_CBAJ_G0019021.1 mouse_genomes_project 11 117603675 117605403 - MGP_CBAJ_P0032694 Smarcd2 protein_coding protein_coding MGP_CBAJ_T0032695.1 MGP_CBAJ_G0019021.1 mouse_genomes_project 11 117604389 117605728 - Smarcd2 protein_coding retained_intron MGP_CBAJ_T0032696.1 MGP_CBAJ_G0019021.1 mouse_genomes_project 11 117604968 117612625 - Smarcd2 protein_coding processed_transcript MGP_CBAJ_T0032697.1 MGP_CBAJ_G0019021.1 mouse_genomes_project 11 117605395 117607140 - Smarcd2 protein_coding processed_transcript MGP_CBAJ_T0032698.1 MGP_CBAJ_G0019021.1 mouse_genomes_project 11 117606547 117607185 - Smarcd2 protein_coding retained_intron MGP_CBAJ_T0031309.1 MGP_CBAJ_G0018671.1 mouse_genomes_project 11 103016075 103081843 + MGP_CBAJ_P0031309 Mbtd1 protein_coding protein_coding MGP_CBAJ_T0031310.1 MGP_CBAJ_G0018671.1 mouse_genomes_project 11 103016089 103053666 + MGP_CBAJ_P0031310 Mbtd1 protein_coding protein_coding MGP_CBAJ_T0031311.1 MGP_CBAJ_G0018671.1 mouse_genomes_project 11 103016329 103053676 + Mbtd1 protein_coding processed_transcript MGP_CBAJ_T0031312.1 MGP_CBAJ_G0018671.1 mouse_genomes_project 11 103016430 103041141 + Mbtd1 protein_coding processed_transcript MGP_CBAJ_T0031313.1 MGP_CBAJ_G0018671.1 mouse_genomes_project 11 103016431 103042598 + Mbtd1 protein_coding processed_transcript MGP_CBAJ_T0031314.1 MGP_CBAJ_G0018671.1 mouse_genomes_project 11 103016440 103080186 + MGP_CBAJ_P0031314 Mbtd1 protein_coding protein_coding MGP_CBAJ_T0031315.1 MGP_CBAJ_G0018671.1 mouse_genomes_project 11 103016442 103081843 + MGP_CBAJ_P0031315 Mbtd1 protein_coding protein_coding MGP_CBAJ_T0031316.1 MGP_CBAJ_G0018671.1 mouse_genomes_project 11 103017101 103062818 + MGP_CBAJ_P0031316 Mbtd1 protein_coding protein_coding MGP_CBAJ_T0031317.1 MGP_CBAJ_G0018671.1 mouse_genomes_project 11 103037486 103081846 + MGP_CBAJ_P0031317 Mbtd1 protein_coding protein_coding MGP_CBAJ_T0031318.1 MGP_CBAJ_G0018671.1 mouse_genomes_project 11 103042182 103044587 + Mbtd1 protein_coding processed_transcript MGP_CBAJ_T0031319.1 MGP_CBAJ_G0018671.1 mouse_genomes_project 11 103044581 103065649 + Mbtd1 protein_coding processed_transcript MGP_CBAJ_T0031320.1 MGP_CBAJ_G0018671.1 mouse_genomes_project 11 103049951 103065355 + Mbtd1 protein_coding processed_transcript MGP_CBAJ_T0031321.1 MGP_CBAJ_G0018671.1 mouse_genomes_project 11 103055252 103058648 + Mbtd1 protein_coding processed_transcript MGP_CBAJ_T0031322.1 MGP_CBAJ_G0018671.1 mouse_genomes_project 11 103057720 103072066 + Mbtd1 protein_coding processed_transcript MGP_CBAJ_T0032000.1 MGP_CBAJ_G0018878.1 mouse_genomes_project 11 110876621 110930853 - MGP_CBAJ_P0032000 Acly protein_coding protein_coding MGP_CBAJ_T0032001.1 MGP_CBAJ_G0018878.1 mouse_genomes_project 11 110876624 110930853 - MGP_CBAJ_P0032001 Acly protein_coding protein_coding MGP_CBAJ_T0032002.1 MGP_CBAJ_G0018878.1 mouse_genomes_project 11 110876626 110926452 - MGP_CBAJ_P0032002 Acly protein_coding protein_coding MGP_CBAJ_T0032003.1 MGP_CBAJ_G0018878.1 mouse_genomes_project 11 110877494 110879650 - Acly protein_coding processed_transcript MGP_CBAJ_T0032004.1 MGP_CBAJ_G0018878.1 mouse_genomes_project 11 110882408 110894347 - Acly protein_coding processed_transcript MGP_CBAJ_T0032005.1 MGP_CBAJ_G0018878.1 mouse_genomes_project 11 110901111 110901962 - Acly protein_coding processed_transcript MGP_CBAJ_T0032006.1 MGP_CBAJ_G0018878.1 mouse_genomes_project 11 110903442 110930722 - MGP_CBAJ_P0032006 Acly protein_coding protein_coding MGP_CBAJ_T0012558.1 MGP_CBAJ_G0010670.1 mouse_genomes_project 11 101764951 101767271 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0032682.1 MGP_CBAJ_G0019019.1 mouse_genomes_project 11 117588346 117595284 - MGP_CBAJ_P0032682 Ftsj3 protein_coding protein_coding MGP_CBAJ_T0032683.1 MGP_CBAJ_G0019019.1 mouse_genomes_project 11 117589103 117589903 - Ftsj3 protein_coding retained_intron MGP_CBAJ_T0032684.1 MGP_CBAJ_G0019019.1 mouse_genomes_project 11 117590213 117591759 - Ftsj3 protein_coding retained_intron MGP_CBAJ_T0032685.1 MGP_CBAJ_G0019019.1 mouse_genomes_project 11 117592580 117593200 - Ftsj3 protein_coding retained_intron MGP_CBAJ_T0032686.1 MGP_CBAJ_G0019019.1 mouse_genomes_project 11 117593496 117595001 - Ftsj3 protein_coding retained_intron MGP_CBAJ_T0032687.1 MGP_CBAJ_G0019019.1 mouse_genomes_project 11 117594067 117595009 - Ftsj3 protein_coding retained_intron MGP_CBAJ_T0009547.1 MGP_CBAJ_G0007685.1 mouse_genomes_project 11 36739605 36739715 + Mir218-2 miRNA miRNA MGP_CBAJ_T0012420.1 MGP_CBAJ_G0010532.1 mouse_genomes_project 11 42322797 42324006 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0032428.1 MGP_CBAJ_G0018959.1 mouse_genomes_project 11 113351485 113354545 - MGP_CBAJ_P0032428 Gm11627 protein_coding protein_coding MGP_CBAJ_T0032429.1 MGP_CBAJ_G0018959.1 mouse_genomes_project 11 113351531 113354359 - Gm11627 protein_coding processed_transcript MGP_CBAJ_T0032430.1 MGP_CBAJ_G0018959.1 mouse_genomes_project 11 113351578 113354203 - MGP_CBAJ_P0032430 Gm11627 protein_coding protein_coding MGP_CBAJ_T0012387.1 MGP_CBAJ_G0010499.1 mouse_genomes_project 11 27500167 27500888 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006103.1 MGP_CBAJ_G0005091.1 mouse_genomes_project 11 23858063 23864687 - lincRNA lincRNA MGP_CBAJ_T0016945.1 MGP_CBAJ_G0014916.1 mouse_genomes_project 11 67417535 67419466 + 2410006H16Rik processed_transcript processed_transcript MGP_CBAJ_T0032268.1 MGP_CBAJ_G0018934.1 mouse_genomes_project 11 112637653 112645492 - MGP_CBAJ_P0032268 Sost protein_coding protein_coding MGP_CBAJ_T0101562.1 MGP_CBAJ_G0039594.1 mouse_genomes_project 11 109915664 109915787 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0027454.1 MGP_CBAJ_G0017704.1 mouse_genomes_project 11 1385771 1391742 + MGP_CBAJ_P0027454 Rnf215 protein_coding protein_coding MGP_CBAJ_T0027455.1 MGP_CBAJ_G0017704.1 mouse_genomes_project 11 1385783 1387938 + MGP_CBAJ_P0027455 Rnf215 protein_coding protein_coding MGP_CBAJ_T0027456.1 MGP_CBAJ_G0017704.1 mouse_genomes_project 11 1385851 1387787 + MGP_CBAJ_P0027456 Rnf215 protein_coding protein_coding MGP_CBAJ_T0027457.1 MGP_CBAJ_G0017704.1 mouse_genomes_project 11 1386071 1387725 + Rnf215 protein_coding processed_transcript MGP_CBAJ_T0012477.1 MGP_CBAJ_G0010589.1 mouse_genomes_project 11 65245165 65245546 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016930.1 MGP_CBAJ_G0014908.1 mouse_genomes_project 11 53624017 53627159 - Gm12198 processed_transcript processed_transcript MGP_CBAJ_T0030279.1 MGP_CBAJ_G0018420.1 mouse_genomes_project 11 81160664 81214754 - Pafah1b1 protein_coding retained_intron MGP_CBAJ_T0030280.1 MGP_CBAJ_G0018420.1 mouse_genomes_project 11 81160664 81215098 - MGP_CBAJ_P0030280 Pafah1b1 protein_coding protein_coding MGP_CBAJ_T0030281.1 MGP_CBAJ_G0018420.1 mouse_genomes_project 11 81160665 81214737 - Pafah1b1 protein_coding retained_intron MGP_CBAJ_T0030282.1 MGP_CBAJ_G0018420.1 mouse_genomes_project 11 81160665 81214277 - MGP_CBAJ_P0030282 Pafah1b1 protein_coding protein_coding MGP_CBAJ_T0030283.1 MGP_CBAJ_G0018420.1 mouse_genomes_project 11 81177688 81213590 - MGP_CBAJ_P0030283 Pafah1b1 protein_coding protein_coding MGP_CBAJ_T0029017.1 MGP_CBAJ_G0018125.1 mouse_genomes_project 11 63833369 63844776 + MGP_CBAJ_P0029017 Jmjd4 protein_coding protein_coding MGP_CBAJ_T0029018.1 MGP_CBAJ_G0018125.1 mouse_genomes_project 11 63833369 63844870 + MGP_CBAJ_P0029018 Jmjd4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029019.1 MGP_CBAJ_G0018125.1 mouse_genomes_project 11 63833369 63844776 + MGP_CBAJ_P0029019 Jmjd4 protein_coding protein_coding MGP_CBAJ_T0029020.1 MGP_CBAJ_G0018125.1 mouse_genomes_project 11 63833445 63842396 + Jmjd4 protein_coding retained_intron MGP_CBAJ_T0003227.1 MGP_CBAJ_G0002980.1 mouse_genomes_project 11 112027810 112028625 - Gm11626 antisense antisense MGP_CBAJ_T0031961.1 MGP_CBAJ_G0018868.1 mouse_genomes_project 11 110627004 110630095 - Krt42 protein_coding retained_intron MGP_CBAJ_T0031962.1 MGP_CBAJ_G0018868.1 mouse_genomes_project 11 110627009 110633988 - MGP_CBAJ_P0031962 Krt42 protein_coding protein_coding MGP_CBAJ_T0027408.1 MGP_CBAJ_G0017692.1 mouse_genomes_project 11 839989 1032002 - MGP_CBAJ_P0027408 Osbp2 protein_coding protein_coding MGP_CBAJ_T0027409.1 MGP_CBAJ_G0017692.1 mouse_genomes_project 11 839991 1031852 - MGP_CBAJ_P0027409 Osbp2 protein_coding protein_coding MGP_CBAJ_T0027410.1 MGP_CBAJ_G0017692.1 mouse_genomes_project 11 840176 859207 - MGP_CBAJ_P0027410 Osbp2 protein_coding protein_coding MGP_CBAJ_T0027411.1 MGP_CBAJ_G0017692.1 mouse_genomes_project 11 854843 917993 - MGP_CBAJ_P0027411 Osbp2 protein_coding protein_coding MGP_CBAJ_T0027412.1 MGP_CBAJ_G0017692.1 mouse_genomes_project 11 854903 918938 - MGP_CBAJ_P0027412 Osbp2 protein_coding protein_coding MGP_CBAJ_T0027413.1 MGP_CBAJ_G0017692.1 mouse_genomes_project 11 861392 1032002 - Osbp2 protein_coding processed_transcript MGP_CBAJ_T0031102.1 MGP_CBAJ_G0018617.1 mouse_genomes_project 11 94636003 94744549 - MGP_CBAJ_P0031102 Vmp1 protein_coding protein_coding MGP_CBAJ_T0031103.1 MGP_CBAJ_G0018617.1 mouse_genomes_project 11 94639810 94657298 - Vmp1 protein_coding processed_transcript MGP_CBAJ_T0031104.1 MGP_CBAJ_G0018617.1 mouse_genomes_project 11 94639900 94641879 - Vmp1 protein_coding processed_transcript MGP_CBAJ_T0031105.1 MGP_CBAJ_G0018617.1 mouse_genomes_project 11 94640149 94641766 - Vmp1 protein_coding processed_transcript MGP_CBAJ_T0031106.1 MGP_CBAJ_G0018617.1 mouse_genomes_project 11 94640152 94657330 - Vmp1 protein_coding processed_transcript MGP_CBAJ_T0031107.1 MGP_CBAJ_G0018617.1 mouse_genomes_project 11 94701914 94722624 - Vmp1 protein_coding processed_transcript MGP_CBAJ_T0031108.1 MGP_CBAJ_G0018617.1 mouse_genomes_project 11 94723604 94744534 - Vmp1 protein_coding processed_transcript MGP_CBAJ_T0031109.1 MGP_CBAJ_G0018617.1 mouse_genomes_project 11 94723704 94730229 - MGP_CBAJ_P0031109 Vmp1 protein_coding protein_coding MGP_CBAJ_T0098666.1 MGP_CBAJ_G0036921.1 mouse_genomes_project 11 2667619 2667726 + Gm25142 snRNA snRNA MGP_CBAJ_T0098738.1 MGP_CBAJ_G0036993.1 mouse_genomes_project 11 131180865 131180960 - Gm24060 snRNA snRNA MGP_CBAJ_T0029673.1 MGP_CBAJ_G0018269.1 mouse_genomes_project 11 75466319 75467733 + MGP_CBAJ_P0029673 Sox15 protein_coding protein_coding MGP_CBAJ_T0011183.1 MGP_CBAJ_G0009321.1 mouse_genomes_project 11 94347767 94347870 + Gm25427 misc_RNA misc_RNA MGP_CBAJ_T0006231.1 MGP_CBAJ_G0005191.1 mouse_genomes_project 11 105030517 105037748 + Gm11528 lincRNA lincRNA MGP_CBAJ_T0033663.1 MGP_CBAJ_G0019217.1 mouse_genomes_project 11 133638152 133647827 - Faap100 protein_coding retained_intron MGP_CBAJ_T0033664.1 MGP_CBAJ_G0019217.1 mouse_genomes_project 11 133638659 133647856 - MGP_CBAJ_P0033664 Faap100 protein_coding protein_coding MGP_CBAJ_T0033665.1 MGP_CBAJ_G0019217.1 mouse_genomes_project 11 133638978 133639986 - Faap100 protein_coding retained_intron MGP_CBAJ_T0033666.1 MGP_CBAJ_G0019217.1 mouse_genomes_project 11 133642070 133643267 - Faap100 protein_coding processed_transcript MGP_CBAJ_T0033667.1 MGP_CBAJ_G0019217.1 mouse_genomes_project 11 133642125 133647828 - Faap100 protein_coding retained_intron MGP_CBAJ_T0033668.1 MGP_CBAJ_G0019217.1 mouse_genomes_project 11 133645261 133647801 - Faap100 protein_coding processed_transcript MGP_CBAJ_T0033669.1 MGP_CBAJ_G0019217.1 mouse_genomes_project 11 133646077 133647566 - Faap100 protein_coding processed_transcript MGP_CBAJ_T0033670.1 MGP_CBAJ_G0019217.1 mouse_genomes_project 11 133646414 133647827 - Faap100 protein_coding processed_transcript MGP_CBAJ_T0012484.1 MGP_CBAJ_G0010596.1 mouse_genomes_project 11 67071811 67072118 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101563.1 MGP_CBAJ_G0039595.1 mouse_genomes_project 11 109959241 109959378 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0009590.1 MGP_CBAJ_G0007728.1 mouse_genomes_project 11 79208175 79208265 + Gm44467 miRNA miRNA MGP_CBAJ_T0009623.1 MGP_CBAJ_G0007761.1 mouse_genomes_project 11 107907934 107908014 + Gm27597 miRNA miRNA MGP_CBAJ_T0027995.1 MGP_CBAJ_G0017829.1 mouse_genomes_project 11 28553958 28789118 - MGP_CBAJ_P0027995 Ccdc85a protein_coding protein_coding MGP_CBAJ_T0027996.1 MGP_CBAJ_G0017829.1 mouse_genomes_project 11 28553967 28789118 - MGP_CBAJ_P0027996 Ccdc85a protein_coding protein_coding MGP_CBAJ_T0027997.1 MGP_CBAJ_G0017829.1 mouse_genomes_project 11 28553967 28789146 - MGP_CBAJ_P0027997 Ccdc85a protein_coding protein_coding MGP_CBAJ_T0027998.1 MGP_CBAJ_G0017829.1 mouse_genomes_project 11 28555427 28788817 - MGP_CBAJ_P0027998 Ccdc85a protein_coding protein_coding MGP_CBAJ_T0027999.1 MGP_CBAJ_G0017829.1 mouse_genomes_project 11 28557119 28782974 - MGP_CBAJ_P0027999 Ccdc85a protein_coding protein_coding MGP_CBAJ_T0028000.1 MGP_CBAJ_G0017829.1 mouse_genomes_project 11 28781746 28789088 - Ccdc85a protein_coding retained_intron MGP_CBAJ_T0031617.1 MGP_CBAJ_G0018749.1 mouse_genomes_project 11 106724844 106747510 + MGP_CBAJ_P0031617 Osbpl7 protein_coding protein_coding MGP_CBAJ_T0031618.1 MGP_CBAJ_G0018749.1 mouse_genomes_project 11 106725036 106727042 + Osbpl7 protein_coding processed_transcript MGP_CBAJ_T0031619.1 MGP_CBAJ_G0018749.1 mouse_genomes_project 11 106725136 106747515 + MGP_CBAJ_P0031619 Osbpl7 protein_coding protein_coding MGP_CBAJ_T0031620.1 MGP_CBAJ_G0018749.1 mouse_genomes_project 11 106726544 106727194 + Osbpl7 protein_coding retained_intron MGP_CBAJ_T0031621.1 MGP_CBAJ_G0018749.1 mouse_genomes_project 11 106727424 106731099 + Osbpl7 protein_coding retained_intron MGP_CBAJ_T0031622.1 MGP_CBAJ_G0018749.1 mouse_genomes_project 11 106745487 106746877 + Osbpl7 protein_coding retained_intron MGP_CBAJ_T0012340.1 MGP_CBAJ_G0010452.1 mouse_genomes_project 11 13138517 13139066 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099930.1 MGP_CBAJ_G0038185.1 mouse_genomes_project 11 67419173 67419245 + Snord65 snoRNA snoRNA MGP_CBAJ_T0033821.1 MGP_CBAJ_G0019247.1 mouse_genomes_project 11 134097689 134100996 - Rfng protein_coding processed_transcript MGP_CBAJ_T0033822.1 MGP_CBAJ_G0019247.1 mouse_genomes_project 11 134097691 134101018 - MGP_CBAJ_P0033822 Rfng protein_coding protein_coding MGP_CBAJ_T0009539.1 MGP_CBAJ_G0007677.1 mouse_genomes_project 11 23648459 23648567 + Gm44381 miRNA miRNA MGP_CBAJ_T0016901.1 MGP_CBAJ_G0014891.1 mouse_genomes_project 11 4414132 4418207 - Gm11981 processed_transcript processed_transcript MGP_CBAJ_T0031917.1 MGP_CBAJ_G0018832.1 mouse_genomes_project 11 109819428 109820129 - MGP_CBAJ_P0031917 protein_coding protein_coding MGP_CBAJ_T0027717.1 MGP_CBAJ_G0017765.1 mouse_genomes_project 11 6745297 6899811 - MGP_CBAJ_P0027717 Pkd1l1 protein_coding protein_coding MGP_CBAJ_T0027718.1 MGP_CBAJ_G0017765.1 mouse_genomes_project 11 6745364 6875507 - MGP_CBAJ_P0027718 Pkd1l1 protein_coding protein_coding MGP_CBAJ_T0027719.1 MGP_CBAJ_G0017765.1 mouse_genomes_project 11 6765407 6781719 - Pkd1l1 protein_coding processed_transcript MGP_CBAJ_T0003146.1 MGP_CBAJ_G0002918.1 mouse_genomes_project 11 75042868 75044195 + Cntrobos antisense antisense MGP_CBAJ_T0031900.1 MGP_CBAJ_G0018817.1 mouse_genomes_project 11 109568854 109572963 - MGP_CBAJ_P0031900 Krt10 protein_coding protein_coding MGP_CBAJ_T0029800.1 MGP_CBAJ_G0018298.1 mouse_genomes_project 11 75838650 75850622 - MGP_CBAJ_P0029800 Elp5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029801.1 MGP_CBAJ_G0018298.1 mouse_genomes_project 11 75838652 75854145 - MGP_CBAJ_P0029801 Elp5 protein_coding protein_coding MGP_CBAJ_T0029802.1 MGP_CBAJ_G0018298.1 mouse_genomes_project 11 75838656 75850613 - Elp5 protein_coding retained_intron MGP_CBAJ_T0029803.1 MGP_CBAJ_G0018298.1 mouse_genomes_project 11 75838660 75839832 - Elp5 protein_coding retained_intron MGP_CBAJ_T0029804.1 MGP_CBAJ_G0018298.1 mouse_genomes_project 11 75839669 75850411 - MGP_CBAJ_P0029804 Elp5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029805.1 MGP_CBAJ_G0018298.1 mouse_genomes_project 11 75839943 75850611 - Elp5 protein_coding retained_intron MGP_CBAJ_T0029806.1 MGP_CBAJ_G0018298.1 mouse_genomes_project 11 75841140 75850561 - Elp5 protein_coding retained_intron MGP_CBAJ_T0029807.1 MGP_CBAJ_G0018298.1 mouse_genomes_project 11 75841158 75854532 - MGP_CBAJ_P0029807 Elp5 protein_coding protein_coding MGP_CBAJ_T0029808.1 MGP_CBAJ_G0018298.1 mouse_genomes_project 11 75845452 75855410 - MGP_CBAJ_P0029808 Elp5 protein_coding protein_coding MGP_CBAJ_T0029809.1 MGP_CBAJ_G0018298.1 mouse_genomes_project 11 75850384 75851046 - MGP_CBAJ_P0029809 Elp5 protein_coding protein_coding MGP_CBAJ_T0006108.1 MGP_CBAJ_G0005096.1 mouse_genomes_project 11 24611314 24648549 - lincRNA lincRNA MGP_CBAJ_T0006109.1 MGP_CBAJ_G0005096.1 mouse_genomes_project 11 24611314 24648557 - lincRNA lincRNA MGP_CBAJ_T0030997.1 MGP_CBAJ_G0018596.1 mouse_genomes_project 11 92648198 92659270 - MGP_CBAJ_P0030997 Mrm1 protein_coding protein_coding MGP_CBAJ_T0030998.1 MGP_CBAJ_G0018596.1 mouse_genomes_project 11 92654497 92655145 - Mrm1 protein_coding retained_intron MGP_CBAJ_T0030999.1 MGP_CBAJ_G0018596.1 mouse_genomes_project 11 92654757 92658489 - Mrm1 protein_coding processed_transcript MGP_CBAJ_T0030250.1 MGP_CBAJ_G0018407.1 mouse_genomes_project 11 80439135 80440138 - MGP_CBAJ_P0030250 Olfr399 protein_coding protein_coding MGP_CBAJ_T0006126.1 MGP_CBAJ_G0005108.1 mouse_genomes_project 11 33920723 33924149 + lincRNA lincRNA MGP_CBAJ_T0003237.1 MGP_CBAJ_G0002990.1 mouse_genomes_project 11 114293622 114299014 + Arhgap27os2 antisense antisense MGP_CBAJ_T0029365.1 MGP_CBAJ_G0018194.1 mouse_genomes_project 11 67929186 67973220 + MGP_CBAJ_P0029365 Tekt3 protein_coding protein_coding MGP_CBAJ_T0012400.1 MGP_CBAJ_G0010512.1 mouse_genomes_project 11 31008945 31012405 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0030178.1 MGP_CBAJ_G0018374.1 mouse_genomes_project 11 79277569 79300422 + Camkk1 protein_coding retained_intron MGP_CBAJ_T0030179.1 MGP_CBAJ_G0018374.1 mouse_genomes_project 11 79277604 79300433 + MGP_CBAJ_P0030179 Camkk1 protein_coding protein_coding MGP_CBAJ_T0030180.1 MGP_CBAJ_G0018374.1 mouse_genomes_project 11 79285146 79298652 + MGP_CBAJ_P0030180 Camkk1 protein_coding protein_coding MGP_CBAJ_T0031064.1 MGP_CBAJ_G0018608.1 mouse_genomes_project 11 93812363 93821750 + MGP_CBAJ_P0031064 Tbx2 protein_coding protein_coding MGP_CBAJ_T0012360.1 MGP_CBAJ_G0010472.1 mouse_genomes_project 11 19251592 19251815 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012324.1 MGP_CBAJ_G0010436.1 mouse_genomes_project 11 4222010 4222462 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099929.1 MGP_CBAJ_G0038184.1 mouse_genomes_project 11 67418108 67418180 + Snord49a snoRNA snoRNA MGP_CBAJ_T0009564.1 MGP_CBAJ_G0007702.1 mouse_genomes_project 11 63257699 63257837 - Gm44313 miRNA miRNA MGP_CBAJ_T0030298.1 MGP_CBAJ_G0018424.1 mouse_genomes_project 11 81411007 81424097 + MGP_CBAJ_P0030298 Tsr1 protein_coding protein_coding MGP_CBAJ_T0030299.1 MGP_CBAJ_G0018424.1 mouse_genomes_project 11 81411027 81416610 + Tsr1 protein_coding retained_intron MGP_CBAJ_T0030300.1 MGP_CBAJ_G0018424.1 mouse_genomes_project 11 81416467 81418660 + Tsr1 protein_coding retained_intron MGP_CBAJ_T0030301.1 MGP_CBAJ_G0018424.1 mouse_genomes_project 11 81418724 81423069 + MGP_CBAJ_P0030301 Tsr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030302.1 MGP_CBAJ_G0018424.1 mouse_genomes_project 11 81419965 81423098 + Tsr1 protein_coding retained_intron MGP_CBAJ_T0028529.1 MGP_CBAJ_G0017975.1 mouse_genomes_project 11 53385887 53395426 + MGP_CBAJ_P0028529 Hnrnph1 protein_coding protein_coding MGP_CBAJ_T0028530.1 MGP_CBAJ_G0017975.1 mouse_genomes_project 11 53386616 53395425 + MGP_CBAJ_P0028530 Hnrnph1 protein_coding protein_coding MGP_CBAJ_T0028531.1 MGP_CBAJ_G0017975.1 mouse_genomes_project 11 53386648 53395426 + Hnrnph1 protein_coding processed_transcript MGP_CBAJ_T0028532.1 MGP_CBAJ_G0017975.1 mouse_genomes_project 11 53386662 53391504 + Hnrnph1 protein_coding processed_transcript MGP_CBAJ_T0028533.1 MGP_CBAJ_G0017975.1 mouse_genomes_project 11 53386666 53394819 + Hnrnph1 protein_coding processed_transcript MGP_CBAJ_T0028534.1 MGP_CBAJ_G0017975.1 mouse_genomes_project 11 53386666 53392090 + Hnrnph1 protein_coding processed_transcript MGP_CBAJ_T0028535.1 MGP_CBAJ_G0017975.1 mouse_genomes_project 11 53386666 53395426 + MGP_CBAJ_P0028535 Hnrnph1 protein_coding protein_coding MGP_CBAJ_T0028536.1 MGP_CBAJ_G0017975.1 mouse_genomes_project 11 53387188 53391035 + Hnrnph1 protein_coding processed_transcript MGP_CBAJ_T0028537.1 MGP_CBAJ_G0017975.1 mouse_genomes_project 11 53387188 53389088 + Hnrnph1 protein_coding processed_transcript MGP_CBAJ_T0028538.1 MGP_CBAJ_G0017975.1 mouse_genomes_project 11 53387188 53389868 + Hnrnph1 protein_coding processed_transcript MGP_CBAJ_T0028539.1 MGP_CBAJ_G0017975.1 mouse_genomes_project 11 53387198 53394821 + Hnrnph1 protein_coding processed_transcript MGP_CBAJ_T0028540.1 MGP_CBAJ_G0017975.1 mouse_genomes_project 11 53391844 53393158 + Hnrnph1 protein_coding processed_transcript MGP_CBAJ_T0028541.1 MGP_CBAJ_G0017975.1 mouse_genomes_project 11 53391984 53392931 + Hnrnph1 protein_coding processed_transcript MGP_CBAJ_T0028542.1 MGP_CBAJ_G0017975.1 mouse_genomes_project 11 53392076 53395219 + Hnrnph1 protein_coding processed_transcript MGP_CBAJ_T0028543.1 MGP_CBAJ_G0017975.1 mouse_genomes_project 11 53392139 53392818 + Hnrnph1 protein_coding processed_transcript MGP_CBAJ_T0028544.1 MGP_CBAJ_G0017975.1 mouse_genomes_project 11 53392709 53393591 + Hnrnph1 protein_coding processed_transcript MGP_CBAJ_T0028545.1 MGP_CBAJ_G0017975.1 mouse_genomes_project 11 53392728 53395287 + Hnrnph1 protein_coding processed_transcript MGP_CBAJ_T0028546.1 MGP_CBAJ_G0017975.1 mouse_genomes_project 11 53393860 53395123 + Hnrnph1 protein_coding processed_transcript MGP_CBAJ_T0016913.1 MGP_CBAJ_G0014896.1 mouse_genomes_project 11 22349360 22355106 + processed_transcript processed_transcript MGP_CBAJ_T0028863.1 MGP_CBAJ_G0018058.1 mouse_genomes_project 11 59365281 59405421 + MGP_CBAJ_P0028863 G3bp1 protein_coding protein_coding MGP_CBAJ_T0028864.1 MGP_CBAJ_G0018058.1 mouse_genomes_project 11 59365314 59388009 + G3bp1 protein_coding processed_transcript MGP_CBAJ_T0028569.1 MGP_CBAJ_G0017982.1 mouse_genomes_project 11 53958013 53970112 - MGP_CBAJ_P0028569 Zfp2 protein_coding protein_coding MGP_CBAJ_T0028570.1 MGP_CBAJ_G0017982.1 mouse_genomes_project 11 53958013 53975432 - MGP_CBAJ_P0028570 Zfp2 protein_coding protein_coding MGP_CBAJ_T0028571.1 MGP_CBAJ_G0017982.1 mouse_genomes_project 11 53958360 53975455 - MGP_CBAJ_P0028571 Zfp2 protein_coding protein_coding MGP_CBAJ_T0028572.1 MGP_CBAJ_G0017982.1 mouse_genomes_project 11 53960548 53975421 - Zfp2 protein_coding processed_transcript MGP_CBAJ_T0028573.1 MGP_CBAJ_G0017982.1 mouse_genomes_project 11 53964485 53975442 - Zfp2 protein_coding processed_transcript MGP_CBAJ_T0028574.1 MGP_CBAJ_G0017982.1 mouse_genomes_project 11 53965291 53975424 - Zfp2 protein_coding processed_transcript MGP_CBAJ_T0029021.1 MGP_CBAJ_G0018126.1 mouse_genomes_project 11 63852794 63864141 - MGP_CBAJ_P0029021 Zfp867 protein_coding protein_coding MGP_CBAJ_T0009546.1 MGP_CBAJ_G0007684.1 mouse_genomes_project 11 33801616 33801710 - Gm26052 miRNA miRNA MGP_CBAJ_T0016925.1 MGP_CBAJ_G0014905.1 mouse_genomes_project 11 43525119 43805820 + processed_transcript processed_transcript MGP_CBAJ_T0016926.1 MGP_CBAJ_G0014905.1 mouse_genomes_project 11 43716097 43813013 + processed_transcript processed_transcript MGP_CBAJ_T0016927.1 MGP_CBAJ_G0014905.1 mouse_genomes_project 11 43795029 43811007 + processed_transcript processed_transcript MGP_CBAJ_T0031534.1 MGP_CBAJ_G0018727.1 mouse_genomes_project 11 105827563 105832709 + MGP_CBAJ_P0031534 Hoxb9 protein_coding protein_coding MGP_CBAJ_T0031535.1 MGP_CBAJ_G0018727.1 mouse_genomes_project 11 105827629 105832709 + MGP_CBAJ_P0031535 Hoxb9 protein_coding protein_coding MGP_CBAJ_T0031884.1 MGP_CBAJ_G0018809.1 mouse_genomes_project 11 109276841 109293343 - MGP_CBAJ_P0031884 Ccr7 protein_coding protein_coding MGP_CBAJ_T0031126.1 MGP_CBAJ_G0018624.1 mouse_genomes_project 11 95178601 95202873 - MGP_CBAJ_P0031126 Prr11 protein_coding protein_coding MGP_CBAJ_T0028798.1 MGP_CBAJ_G0018042.1 mouse_genomes_project 11 58199012 58282026 + MGP_CBAJ_P0028798 Fnip1 protein_coding protein_coding MGP_CBAJ_T0028799.1 MGP_CBAJ_G0018042.1 mouse_genomes_project 11 58225263 58263196 + MGP_CBAJ_P0028799 Fnip1 protein_coding protein_coding MGP_CBAJ_T0012394.1 MGP_CBAJ_G0010506.1 mouse_genomes_project 11 29850922 29851884 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031198.1 MGP_CBAJ_G0018638.1 mouse_genomes_project 11 96032014 96055989 - MGP_CBAJ_P0031198 Lpo protein_coding protein_coding MGP_CBAJ_T0031199.1 MGP_CBAJ_G0018638.1 mouse_genomes_project 11 96043053 96043992 - Lpo protein_coding retained_intron MGP_CBAJ_T0031200.1 MGP_CBAJ_G0018638.1 mouse_genomes_project 11 96044220 96058122 - MGP_CBAJ_P0031200 Lpo protein_coding protein_coding MGP_CBAJ_T0003297.1 MGP_CBAJ_G0003039.1 mouse_genomes_project 11 134314442 134315363 + Gm28192 antisense antisense MGP_CBAJ_T0031757.1 MGP_CBAJ_G0018780.1 mouse_genomes_project 11 108279097 108287812 + MGP_CBAJ_P0031757 Ppp1r1b protein_coding protein_coding MGP_CBAJ_T0031758.1 MGP_CBAJ_G0018780.1 mouse_genomes_project 11 108280858 108287797 + Ppp1r1b protein_coding retained_intron MGP_CBAJ_T0031759.1 MGP_CBAJ_G0018780.1 mouse_genomes_project 11 108281218 108287400 + Ppp1r1b protein_coding retained_intron MGP_CBAJ_T0031760.1 MGP_CBAJ_G0018780.1 mouse_genomes_project 11 108281492 108287295 + Ppp1r1b protein_coding processed_transcript MGP_CBAJ_T0031761.1 MGP_CBAJ_G0018780.1 mouse_genomes_project 11 108284599 108287112 + Ppp1r1b protein_coding processed_transcript MGP_CBAJ_T0027884.1 MGP_CBAJ_G0017804.1 mouse_genomes_project 11 21394946 21401960 - MGP_CBAJ_P0027884 Otx1 protein_coding protein_coding MGP_CBAJ_T0027885.1 MGP_CBAJ_G0017804.1 mouse_genomes_project 11 21394951 21402055 - Otx1 protein_coding retained_intron MGP_CBAJ_T0027886.1 MGP_CBAJ_G0017804.1 mouse_genomes_project 11 21397154 21403331 - MGP_CBAJ_P0027886 Otx1 protein_coding protein_coding MGP_CBAJ_T0012426.1 MGP_CBAJ_G0010538.1 mouse_genomes_project 11 45710942 45712143 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012425.1 MGP_CBAJ_G0010537.1 mouse_genomes_project 11 45521551 45521841 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0003143.1 MGP_CBAJ_G0002915.1 mouse_genomes_project 11 73754062 73758023 - C78197 antisense antisense MGP_CBAJ_T0003239.1 MGP_CBAJ_G0002992.1 mouse_genomes_project 11 115309683 115318870 - Gm11659 antisense antisense MGP_CBAJ_T0003204.1 MGP_CBAJ_G0002963.1 mouse_genomes_project 11 105901733 105913394 - Hoxb3os antisense antisense MGP_CBAJ_T0003205.1 MGP_CBAJ_G0002963.1 mouse_genomes_project 11 105904171 105906613 - Hoxb3os antisense antisense MGP_CBAJ_T0030540.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84709881 84829363 + MGP_CBAJ_P0030540 Myo18a protein_coding protein_coding MGP_CBAJ_T0030541.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84709929 84775685 + MGP_CBAJ_P0030541 Myo18a protein_coding unknown_likely_coding MGP_CBAJ_T0030542.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84709936 84728207 + Myo18a protein_coding retained_intron MGP_CBAJ_T0030543.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84712238 84725418 + MGP_CBAJ_P0030543 Myo18a protein_coding protein_coding MGP_CBAJ_T0030544.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84713371 84829363 + MGP_CBAJ_P0030544 Myo18a protein_coding protein_coding MGP_CBAJ_T0030545.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84719398 84829363 + MGP_CBAJ_P0030545 Myo18a protein_coding protein_coding MGP_CBAJ_T0030546.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84725276 84829363 + MGP_CBAJ_P0030546 Myo18a protein_coding protein_coding MGP_CBAJ_T0030547.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84725276 84829363 + MGP_CBAJ_P0030547 Myo18a protein_coding protein_coding MGP_CBAJ_T0030548.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84725304 84828526 + MGP_CBAJ_P0030548 Myo18a protein_coding protein_coding MGP_CBAJ_T0030549.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84725304 84828525 + MGP_CBAJ_P0030549 Myo18a protein_coding protein_coding MGP_CBAJ_T0030550.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84725327 84828231 + MGP_CBAJ_P0030550 Myo18a protein_coding protein_coding MGP_CBAJ_T0030552.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84755456 84829220 + MGP_CBAJ_P0030552 Myo18a protein_coding protein_coding MGP_CBAJ_T0030553.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84755495 84766700 + MGP_CBAJ_P0030553 Myo18a protein_coding protein_coding MGP_CBAJ_T0030554.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84755508 84829363 + MGP_CBAJ_P0030554 Myo18a protein_coding protein_coding MGP_CBAJ_T0030555.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84755508 84828492 + MGP_CBAJ_P0030555 Myo18a protein_coding protein_coding MGP_CBAJ_T0030556.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84755533 84828220 + MGP_CBAJ_P0030556 Myo18a protein_coding protein_coding MGP_CBAJ_T0030557.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84755533 84828439 + MGP_CBAJ_P0030557 Myo18a protein_coding protein_coding MGP_CBAJ_T0030558.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84765645 84829363 + MGP_CBAJ_P0030558 Myo18a protein_coding protein_coding MGP_CBAJ_T0030559.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84778680 84781768 + Myo18a protein_coding processed_transcript MGP_CBAJ_T0030560.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84795916 84799398 + Myo18a protein_coding processed_transcript MGP_CBAJ_T0030561.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84798762 84806149 + Myo18a protein_coding retained_intron MGP_CBAJ_T0030562.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84810721 84816837 + Myo18a protein_coding retained_intron MGP_CBAJ_T0030563.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84811926 84816708 + Myo18a protein_coding retained_intron MGP_CBAJ_T0030564.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84817246 84822745 + MGP_CBAJ_P0030564 Myo18a protein_coding protein_coding MGP_CBAJ_T0030565.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84820861 84828459 + Myo18a protein_coding retained_intron MGP_CBAJ_T0030566.1 MGP_CBAJ_G0018478.1 mouse_genomes_project 11 84823669 84828578 + Myo18a protein_coding processed_transcript MGP_CBAJ_T0012362.1 MGP_CBAJ_G0010474.1 mouse_genomes_project 11 19770834 19771457 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0027493.1 MGP_CBAJ_G0017713.1 mouse_genomes_project 11 1925537 1928228 + MGP_CBAJ_P0027493 Gm11032 protein_coding protein_coding MGP_CBAJ_T0030338.1 MGP_CBAJ_G0018433.1 mouse_genomes_project 11 81970501 81985925 - MGP_CBAJ_P0030338 Serpinf1 protein_coding protein_coding MGP_CBAJ_T0030339.1 MGP_CBAJ_G0018433.1 mouse_genomes_project 11 81970796 81978780 - MGP_CBAJ_P0030339 Serpinf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030340.1 MGP_CBAJ_G0018433.1 mouse_genomes_project 11 81970953 81976514 - MGP_CBAJ_P0030340 Serpinf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030341.1 MGP_CBAJ_G0018433.1 mouse_genomes_project 11 81974697 81985810 - MGP_CBAJ_P0030341 Serpinf1 protein_coding protein_coding MGP_CBAJ_T0030342.1 MGP_CBAJ_G0018433.1 mouse_genomes_project 11 81974756 81975979 - Serpinf1 protein_coding retained_intron MGP_CBAJ_T0030343.1 MGP_CBAJ_G0018433.1 mouse_genomes_project 11 81975704 81985779 - MGP_CBAJ_P0030343 Serpinf1 protein_coding protein_coding MGP_CBAJ_T0030344.1 MGP_CBAJ_G0018433.1 mouse_genomes_project 11 81976253 81985776 - MGP_CBAJ_P0030344 Serpinf1 protein_coding protein_coding MGP_CBAJ_T0030345.1 MGP_CBAJ_G0018433.1 mouse_genomes_project 11 81977099 81979081 - MGP_CBAJ_P0030345 Serpinf1 protein_coding protein_coding MGP_CBAJ_T0098683.1 MGP_CBAJ_G0036938.1 mouse_genomes_project 11 50538999 50539160 - Gm23039 snRNA snRNA MGP_CBAJ_T0031945.1 MGP_CBAJ_G0018859.1 mouse_genomes_project 11 110442297 110446307 - MGP_CBAJ_P0031945 Krt35 protein_coding protein_coding MGP_CBAJ_T0031946.1 MGP_CBAJ_G0018859.1 mouse_genomes_project 11 110442299 110446323 - Krt35 protein_coding retained_intron MGP_CBAJ_T0029757.1 MGP_CBAJ_G0018291.1 mouse_genomes_project 11 75729837 75738580 - MGP_CBAJ_P0029757 Acap1 protein_coding protein_coding MGP_CBAJ_T0029758.1 MGP_CBAJ_G0018291.1 mouse_genomes_project 11 75729837 75743802 - MGP_CBAJ_P0029758 Acap1 protein_coding protein_coding MGP_CBAJ_T0029759.1 MGP_CBAJ_G0018291.1 mouse_genomes_project 11 75729895 75761596 - MGP_CBAJ_P0029759 Acap1 protein_coding unknown_likely_coding MGP_CBAJ_T0029760.1 MGP_CBAJ_G0018291.1 mouse_genomes_project 11 75731753 75736688 - Acap1 protein_coding processed_transcript MGP_CBAJ_T0029761.1 MGP_CBAJ_G0018291.1 mouse_genomes_project 11 75737622 75738740 - Acap1 protein_coding processed_transcript MGP_CBAJ_T0016960.1 MGP_CBAJ_G0014926.1 mouse_genomes_project 11 82448276 82481637 + Gm12339 processed_transcript antisense MGP_CBAJ_T0016961.1 MGP_CBAJ_G0014926.1 mouse_genomes_project 11 82448728 82481655 + Gm12339 processed_transcript processed_transcript MGP_CBAJ_T0032245.1 MGP_CBAJ_G0018929.1 mouse_genomes_project 11 112221276 112226950 + Rdm1 protein_coding processed_transcript MGP_CBAJ_T0032246.1 MGP_CBAJ_G0018929.1 mouse_genomes_project 11 112222119 112232148 + MGP_CBAJ_P0032246 Rdm1 protein_coding protein_coding MGP_CBAJ_T0032247.1 MGP_CBAJ_G0018929.1 mouse_genomes_project 11 112222149 112229882 + Rdm1 protein_coding processed_transcript MGP_CBAJ_T0032248.1 MGP_CBAJ_G0018929.1 mouse_genomes_project 11 112222566 112232120 + MGP_CBAJ_P0032248 Rdm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032249.1 MGP_CBAJ_G0018929.1 mouse_genomes_project 11 112229786 112232008 + Rdm1 protein_coding retained_intron MGP_CBAJ_T0029895.1 MGP_CBAJ_G0018315.1 mouse_genomes_project 11 76173012 76189709 - MGP_CBAJ_P0029895 Alox12 protein_coding protein_coding MGP_CBAJ_T0029896.1 MGP_CBAJ_G0018315.1 mouse_genomes_project 11 76183320 76189697 - MGP_CBAJ_P0029896 Alox12 protein_coding protein_coding MGP_CBAJ_T0003138.1 MGP_CBAJ_G0002912.1 mouse_genomes_project 11 72596443 72600924 - 9430073C21Rik antisense antisense MGP_CBAJ_T0003041.1 MGP_CBAJ_G0002830.1 mouse_genomes_project 11 248790 262723 - antisense antisense MGP_CBAJ_T0030255.1 MGP_CBAJ_G0018409.1 mouse_genomes_project 11 80510255 80511203 + MGP_CBAJ_P0030255 Olfr401 protein_coding protein_coding MGP_CBAJ_T0028106.1 MGP_CBAJ_G0017853.1 mouse_genomes_project 11 32641567 32710319 + MGP_CBAJ_P0028106 Nsg2 protein_coding protein_coding MGP_CBAJ_T0028107.1 MGP_CBAJ_G0017853.1 mouse_genomes_project 11 32641567 32661934 + MGP_CBAJ_P0028107 Nsg2 protein_coding protein_coding MGP_CBAJ_T0028108.1 MGP_CBAJ_G0017853.1 mouse_genomes_project 11 32641606 32677744 + MGP_CBAJ_P0028108 Nsg2 protein_coding protein_coding MGP_CBAJ_T0027922.1 MGP_CBAJ_G0017814.1 mouse_genomes_project 11 22810817 22858211 + MGP_CBAJ_P0027922 Xpo1 protein_coding protein_coding MGP_CBAJ_T0027923.1 MGP_CBAJ_G0017814.1 mouse_genomes_project 11 22810817 22858211 + MGP_CBAJ_P0027923 Xpo1 protein_coding protein_coding MGP_CBAJ_T0027924.1 MGP_CBAJ_G0017814.1 mouse_genomes_project 11 22810831 22856847 + MGP_CBAJ_P0027924 Xpo1 protein_coding protein_coding MGP_CBAJ_T0027925.1 MGP_CBAJ_G0017814.1 mouse_genomes_project 11 22810834 22838386 + Xpo1 protein_coding processed_transcript MGP_CBAJ_T0027926.1 MGP_CBAJ_G0017814.1 mouse_genomes_project 11 22810854 22858863 + MGP_CBAJ_P0027926 Xpo1 protein_coding protein_coding MGP_CBAJ_T0027927.1 MGP_CBAJ_G0017814.1 mouse_genomes_project 11 22811365 22822539 + MGP_CBAJ_P0027927 Xpo1 protein_coding protein_coding MGP_CBAJ_T0027928.1 MGP_CBAJ_G0017814.1 mouse_genomes_project 11 22845261 22848069 + MGP_CBAJ_P0027928 Xpo1 protein_coding protein_coding MGP_CBAJ_T0012493.1 MGP_CBAJ_G0010605.1 mouse_genomes_project 11 73575628 73576299 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031123.1 MGP_CBAJ_G0018622.1 mouse_genomes_project 11 95113680 95159964 - MGP_CBAJ_P0031123 Gdpd1 protein_coding protein_coding MGP_CBAJ_T0028891.1 MGP_CBAJ_G0018069.1 mouse_genomes_project 11 62296396 62312179 + MGP_CBAJ_P0028891 Cnot8 protein_coding unknown_likely_coding MGP_CBAJ_T0028892.1 MGP_CBAJ_G0018069.1 mouse_genomes_project 11 62296514 62315720 + MGP_CBAJ_P0028892 Cnot8 protein_coding protein_coding MGP_CBAJ_T0028893.1 MGP_CBAJ_G0018069.1 mouse_genomes_project 11 62296590 62315720 + MGP_CBAJ_P0028893 Cnot8 protein_coding protein_coding MGP_CBAJ_T0028894.1 MGP_CBAJ_G0018069.1 mouse_genomes_project 11 62296727 62305935 + MGP_CBAJ_P0028894 Cnot8 protein_coding protein_coding MGP_CBAJ_T0028895.1 MGP_CBAJ_G0018069.1 mouse_genomes_project 11 62308629 62311849 + Cnot8 protein_coding processed_transcript MGP_CBAJ_T0006190.1 MGP_CBAJ_G0005164.1 mouse_genomes_project 11 83382908 83390644 + Gm26780 lincRNA lincRNA MGP_CBAJ_T0003258.1 MGP_CBAJ_G0003009.1 mouse_genomes_project 11 120650599 120653302 - Gm11670 antisense antisense MGP_CBAJ_T0003134.1 MGP_CBAJ_G0002909.1 mouse_genomes_project 11 69022154 69024758 + Gm12289 antisense antisense MGP_CBAJ_T0003234.1 MGP_CBAJ_G0002987.1 mouse_genomes_project 11 113116287 113117759 - Bloodlinc antisense antisense MGP_CBAJ_T0030328.1 MGP_CBAJ_G0018430.1 mouse_genomes_project 11 81739689 81813282 + MGP_CBAJ_P0030328 Rtn4rl1 protein_coding protein_coding MGP_CBAJ_T0031957.1 MGP_CBAJ_G0018865.1 mouse_genomes_project 11 110555446 110558315 - Krt14 protein_coding processed_transcript MGP_CBAJ_T0031958.1 MGP_CBAJ_G0018865.1 mouse_genomes_project 11 110555446 110559809 - MGP_CBAJ_P0031958 Krt14 protein_coding protein_coding MGP_CBAJ_T0009554.1 MGP_CBAJ_G0007692.1 mouse_genomes_project 11 52712382 52712459 + Gm23813 miRNA miRNA MGP_CBAJ_T0012576.1 MGP_CBAJ_G0010688.1 mouse_genomes_project 11 110598994 110599345 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0030435.1 MGP_CBAJ_G0018453.1 mouse_genomes_project 11 82932345 82942083 - MGP_CBAJ_P0030435 Gemin4 protein_coding protein_coding MGP_CBAJ_T0030437.1 MGP_CBAJ_G0018453.1 mouse_genomes_project 11 82941497 82941936 - MGP_CBAJ_P0030437 Gemin4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033487.1 MGP_CBAJ_G0019183.1 mouse_genomes_project 11 131260636 131267037 - Usp36 protein_coding retained_intron MGP_CBAJ_T0033488.1 MGP_CBAJ_G0019183.1 mouse_genomes_project 11 131260637 131290997 - MGP_CBAJ_P0033488 Usp36 protein_coding protein_coding MGP_CBAJ_T0033489.1 MGP_CBAJ_G0019183.1 mouse_genomes_project 11 131261854 131264274 - Usp36 protein_coding retained_intron MGP_CBAJ_T0033490.1 MGP_CBAJ_G0019183.1 mouse_genomes_project 11 131284691 131290970 - Usp36 protein_coding retained_intron MGP_CBAJ_T0006213.1 MGP_CBAJ_G0005179.1 mouse_genomes_project 11 95962444 95970508 + lincRNA lincRNA MGP_CBAJ_T0003208.1 MGP_CBAJ_G0002966.1 mouse_genomes_project 11 106862524 106864320 + antisense antisense MGP_CBAJ_T0012536.1 MGP_CBAJ_G0010648.1 mouse_genomes_project 11 88469592 88471570 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016947.1 MGP_CBAJ_G0014918.1 mouse_genomes_project 11 72353237 72367254 + Gm12299 processed_transcript processed_transcript MGP_CBAJ_T0029326.1 MGP_CBAJ_G0018185.1 mouse_genomes_project 11 67419542 67466219 - MGP_CBAJ_P0029326 Lrrc75a protein_coding protein_coding MGP_CBAJ_T0029327.1 MGP_CBAJ_G0018185.1 mouse_genomes_project 11 67420481 67465736 - Lrrc75a protein_coding processed_transcript MGP_CBAJ_T0029328.1 MGP_CBAJ_G0018185.1 mouse_genomes_project 11 67420685 67465745 - Lrrc75a protein_coding processed_transcript MGP_CBAJ_T0027842.1 MGP_CBAJ_G0017795.1 mouse_genomes_project 11 19440763 19477320 - MGP_CBAJ_P0027842 Slc1a4 protein_coding protein_coding MGP_CBAJ_T0030273.1 MGP_CBAJ_G0018419.1 mouse_genomes_project 11 81136205 81143275 + Cluh protein_coding processed_transcript MGP_CBAJ_T0030274.1 MGP_CBAJ_G0018419.1 mouse_genomes_project 11 81136225 81156618 + MGP_CBAJ_P0030274 Cluh protein_coding protein_coding MGP_CBAJ_T0030275.1 MGP_CBAJ_G0018419.1 mouse_genomes_project 11 81136225 81157560 + MGP_CBAJ_P0030275 Cluh protein_coding protein_coding MGP_CBAJ_T0030276.1 MGP_CBAJ_G0018419.1 mouse_genomes_project 11 81136250 81157560 + Cluh protein_coding retained_intron MGP_CBAJ_T0030277.1 MGP_CBAJ_G0018419.1 mouse_genomes_project 11 81136540 81144063 + Cluh protein_coding processed_transcript MGP_CBAJ_T0030278.1 MGP_CBAJ_G0018419.1 mouse_genomes_project 11 81151188 81152015 + Cluh protein_coding retained_intron MGP_CBAJ_T0033004.1 MGP_CBAJ_G0019092.1 mouse_genomes_project 11 127563382 127630286 + Rab37 protein_coding retained_intron MGP_CBAJ_T0033005.1 MGP_CBAJ_G0019092.1 mouse_genomes_project 11 127563382 127646920 + MGP_CBAJ_P0033005 Rab37 protein_coding protein_coding MGP_CBAJ_T0033014.1 MGP_CBAJ_G0019092.1 mouse_genomes_project 11 127638845 127646920 + MGP_CBAJ_P0033014 Rab37 protein_coding protein_coding MGP_CBAJ_T0033015.1 MGP_CBAJ_G0019092.1 mouse_genomes_project 11 127638891 127642235 + Rab37 protein_coding retained_intron MGP_CBAJ_T0012604.1 MGP_CBAJ_G0010716.1 mouse_genomes_project 11 123260609 123261441 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006084.1 MGP_CBAJ_G0005073.1 mouse_genomes_project 11 12524071 12657848 - lincRNA lincRNA MGP_CBAJ_T0028302.1 MGP_CBAJ_G0017905.1 mouse_genomes_project 11 45836688 45856833 - MGP_CBAJ_P0028302 Ttc1 protein_coding protein_coding MGP_CBAJ_T0028303.1 MGP_CBAJ_G0017905.1 mouse_genomes_project 11 45837185 45856807 - MGP_CBAJ_P0028303 Ttc1 protein_coding protein_coding MGP_CBAJ_T0028304.1 MGP_CBAJ_G0017905.1 mouse_genomes_project 11 45852189 45856817 - Ttc1 protein_coding processed_transcript MGP_CBAJ_T0099944.1 MGP_CBAJ_G0038199.1 mouse_genomes_project 11 85196464 85196529 - Snord42a snoRNA snoRNA MGP_CBAJ_T0006273.1 MGP_CBAJ_G0005222.1 mouse_genomes_project 11 128624684 128630120 - B230344G16Rik lincRNA lincRNA MGP_CBAJ_T0033809.1 MGP_CBAJ_G0019244.1 mouse_genomes_project 11 134028168 134030668 + MGP_CBAJ_P0033809 Rac3 protein_coding protein_coding MGP_CBAJ_T0033810.1 MGP_CBAJ_G0019244.1 mouse_genomes_project 11 134028271 134030305 + MGP_CBAJ_P0033810 Rac3 protein_coding protein_coding MGP_CBAJ_T0033811.1 MGP_CBAJ_G0019244.1 mouse_genomes_project 11 134028712 134030264 + Rac3 protein_coding processed_transcript MGP_CBAJ_T0032307.1 MGP_CBAJ_G0018943.1 mouse_genomes_project 11 112848098 112851957 - MGP_CBAJ_P0032307 Tmem101 protein_coding protein_coding MGP_CBAJ_T0032308.1 MGP_CBAJ_G0018943.1 mouse_genomes_project 11 112849726 112851900 - Tmem101 protein_coding processed_transcript MGP_CBAJ_T0032309.1 MGP_CBAJ_G0018943.1 mouse_genomes_project 11 112851367 112851908 - Tmem101 protein_coding processed_transcript MGP_CBAJ_T0032067.1 MGP_CBAJ_G0018893.1 mouse_genomes_project 11 111348353 111403681 - MGP_CBAJ_P0032067 Stat3 protein_coding protein_coding MGP_CBAJ_T0032068.1 MGP_CBAJ_G0018893.1 mouse_genomes_project 11 111349769 111351860 - Stat3 protein_coding retained_intron MGP_CBAJ_T0032069.1 MGP_CBAJ_G0018893.1 mouse_genomes_project 11 111349783 111403669 - MGP_CBAJ_P0032069 Stat3 protein_coding protein_coding MGP_CBAJ_T0032070.1 MGP_CBAJ_G0018893.1 mouse_genomes_project 11 111350228 111403768 - MGP_CBAJ_P0032070 Stat3 protein_coding protein_coding MGP_CBAJ_T0032071.1 MGP_CBAJ_G0018893.1 mouse_genomes_project 11 111351025 111355291 - Stat3 protein_coding retained_intron MGP_CBAJ_T0032072.1 MGP_CBAJ_G0018893.1 mouse_genomes_project 11 111354576 111355350 - Stat3 protein_coding retained_intron MGP_CBAJ_T0032073.1 MGP_CBAJ_G0018893.1 mouse_genomes_project 11 111355071 111355981 - Stat3 protein_coding retained_intron MGP_CBAJ_T0032074.1 MGP_CBAJ_G0018893.1 mouse_genomes_project 11 111355518 111360535 - Stat3 protein_coding processed_transcript MGP_CBAJ_T0032075.1 MGP_CBAJ_G0018893.1 mouse_genomes_project 11 111356030 111356665 - Stat3 protein_coding retained_intron MGP_CBAJ_T0032076.1 MGP_CBAJ_G0018893.1 mouse_genomes_project 11 111356032 111359756 - Stat3 protein_coding retained_intron MGP_CBAJ_T0032077.1 MGP_CBAJ_G0018893.1 mouse_genomes_project 11 111363964 111366610 - Stat3 protein_coding retained_intron MGP_CBAJ_T0032078.1 MGP_CBAJ_G0018893.1 mouse_genomes_project 11 111366278 111367045 - Stat3 protein_coding retained_intron MGP_CBAJ_T0032079.1 MGP_CBAJ_G0018893.1 mouse_genomes_project 11 111366854 111369423 - Stat3 protein_coding retained_intron MGP_CBAJ_T0097910.1 MGP_CBAJ_G0036183.1 mouse_genomes_project 11 93756428 93756544 + Gm23473 rRNA rRNA MGP_CBAJ_T0017008.1 MGP_CBAJ_G0014956.1 mouse_genomes_project 11 119380049 119382245 + Gm11650 processed_transcript processed_transcript MGP_CBAJ_T0029010.1 MGP_CBAJ_G0018123.1 mouse_genomes_project 11 63749914 63752996 - MGP_CBAJ_P0029010 Prss38 protein_coding protein_coding MGP_CBAJ_T0009651.1 MGP_CBAJ_G0007789.1 mouse_genomes_project 11 132512687 132512777 + Mir1932 miRNA miRNA MGP_CBAJ_T0012395.1 MGP_CBAJ_G0010507.1 mouse_genomes_project 11 29996303 29997898 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0029916.1 MGP_CBAJ_G0018320.1 mouse_genomes_project 11 76401380 76403197 + MGP_CBAJ_P0029916 Med11 protein_coding protein_coding MGP_CBAJ_T0029917.1 MGP_CBAJ_G0018320.1 mouse_genomes_project 11 76401380 76402710 + MGP_CBAJ_P0029917 Med11 protein_coding protein_coding MGP_CBAJ_T0029918.1 MGP_CBAJ_G0018320.1 mouse_genomes_project 11 76401393 76403034 + Med11 protein_coding retained_intron MGP_CBAJ_T0003284.1 MGP_CBAJ_G0003030.1 mouse_genomes_project 11 133141005 133147901 - Gm11767 antisense antisense MGP_CBAJ_T0032384.1 MGP_CBAJ_G0018954.1 mouse_genomes_project 11 113151745 113156305 - MGP_CBAJ_P0032384 Slc25a39 protein_coding protein_coding MGP_CBAJ_T0032385.1 MGP_CBAJ_G0018954.1 mouse_genomes_project 11 113151745 113156250 - MGP_CBAJ_P0032385 Slc25a39 protein_coding protein_coding MGP_CBAJ_T0032386.1 MGP_CBAJ_G0018954.1 mouse_genomes_project 11 113151802 113153254 - MGP_CBAJ_P0032386 Slc25a39 protein_coding protein_coding MGP_CBAJ_T0032387.1 MGP_CBAJ_G0018954.1 mouse_genomes_project 11 113151905 113156267 - Slc25a39 protein_coding retained_intron MGP_CBAJ_T0032388.1 MGP_CBAJ_G0018954.1 mouse_genomes_project 11 113152551 113156269 - MGP_CBAJ_P0032388 Slc25a39 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032389.1 MGP_CBAJ_G0018954.1 mouse_genomes_project 11 113152778 113156217 - Slc25a39 protein_coding retained_intron MGP_CBAJ_T0032390.1 MGP_CBAJ_G0018954.1 mouse_genomes_project 11 113152792 113155577 - MGP_CBAJ_P0032390 Slc25a39 protein_coding protein_coding MGP_CBAJ_T0032391.1 MGP_CBAJ_G0018954.1 mouse_genomes_project 11 113152822 113156248 - MGP_CBAJ_P0032391 Slc25a39 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032392.1 MGP_CBAJ_G0018954.1 mouse_genomes_project 11 113153149 113156224 - Slc25a39 protein_coding retained_intron MGP_CBAJ_T0032393.1 MGP_CBAJ_G0018954.1 mouse_genomes_project 11 113153244 113156076 - MGP_CBAJ_P0032393 Slc25a39 protein_coding protein_coding MGP_CBAJ_T0032394.1 MGP_CBAJ_G0018954.1 mouse_genomes_project 11 113153369 113155716 - MGP_CBAJ_P0032394 Slc25a39 protein_coding protein_coding MGP_CBAJ_T0032395.1 MGP_CBAJ_G0018954.1 mouse_genomes_project 11 113153547 113156144 - MGP_CBAJ_P0032395 Slc25a39 protein_coding protein_coding MGP_CBAJ_T0032396.1 MGP_CBAJ_G0018954.1 mouse_genomes_project 11 113153614 113156707 - MGP_CBAJ_P0032396 Slc25a39 protein_coding protein_coding MGP_CBAJ_T0032397.1 MGP_CBAJ_G0018954.1 mouse_genomes_project 11 113153783 113155569 - Slc25a39 protein_coding processed_transcript MGP_CBAJ_T0032398.1 MGP_CBAJ_G0018954.1 mouse_genomes_project 11 113154499 113155645 - Slc25a39 protein_coding retained_intron MGP_CBAJ_T0012428.1 MGP_CBAJ_G0010540.1 mouse_genomes_project 11 46602148 46602308 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0028294.1 MGP_CBAJ_G0017902.1 mouse_genomes_project 11 45675654 45677657 + MGP_CBAJ_P0028294 4933415A04Rik protein_coding protein_coding MGP_CBAJ_T0006156.1 MGP_CBAJ_G0005137.1 mouse_genomes_project 11 64377975 64378366 + 1810063I02Rik lincRNA lincRNA MGP_CBAJ_T0032215.1 MGP_CBAJ_G0018926.1 mouse_genomes_project 11 112063376 112136172 - MGP_CBAJ_P0032215 Brca1 protein_coding protein_coding MGP_CBAJ_T0032216.1 MGP_CBAJ_G0018926.1 mouse_genomes_project 11 112070894 112082613 - Brca1 protein_coding retained_intron MGP_CBAJ_T0032217.1 MGP_CBAJ_G0018926.1 mouse_genomes_project 11 112089611 112101488 - Brca1 protein_coding retained_intron MGP_CBAJ_T0032218.1 MGP_CBAJ_G0018926.1 mouse_genomes_project 11 112103221 112103887 - MGP_CBAJ_P0032218 Brca1 protein_coding protein_coding MGP_CBAJ_T0032219.1 MGP_CBAJ_G0018926.1 mouse_genomes_project 11 112103235 112104235 - Brca1 protein_coding processed_transcript MGP_CBAJ_T0032220.1 MGP_CBAJ_G0018926.1 mouse_genomes_project 11 112104535 112136248 - MGP_CBAJ_P0032220 Brca1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032221.1 MGP_CBAJ_G0018926.1 mouse_genomes_project 11 112111111 112135875 - MGP_CBAJ_P0032221 Brca1 protein_coding protein_coding MGP_CBAJ_T0028070.1 MGP_CBAJ_G0017842.1 mouse_genomes_project 11 30835046 30897950 - MGP_CBAJ_P0028070 4930505A04Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0028071.1 MGP_CBAJ_G0017842.1 mouse_genomes_project 11 30835046 30897931 - MGP_CBAJ_P0028071 4930505A04Rik protein_coding protein_coding MGP_CBAJ_T0098736.1 MGP_CBAJ_G0036991.1 mouse_genomes_project 11 121303025 121303136 - Gm22378 snRNA snRNA MGP_CBAJ_T0009592.1 MGP_CBAJ_G0007730.1 mouse_genomes_project 11 81717019 81717110 + Mir212 miRNA miRNA MGP_CBAJ_T0033876.1 MGP_CBAJ_G0019257.1 mouse_genomes_project 11 134495607 134498070 - MGP_CBAJ_P0033876 Tex19.2 protein_coding protein_coding MGP_CBAJ_T0029000.1 MGP_CBAJ_G0018118.1 mouse_genomes_project 11 63545863 63551857 + MGP_CBAJ_P0029000 Mrpl55 protein_coding protein_coding MGP_CBAJ_T0029001.1 MGP_CBAJ_G0018118.1 mouse_genomes_project 11 63545866 63551818 + MGP_CBAJ_P0029001 Mrpl55 protein_coding protein_coding MGP_CBAJ_T0029002.1 MGP_CBAJ_G0018118.1 mouse_genomes_project 11 63545869 63552064 + MGP_CBAJ_P0029002 Mrpl55 protein_coding protein_coding MGP_CBAJ_T0029003.1 MGP_CBAJ_G0018118.1 mouse_genomes_project 11 63545882 63551932 + MGP_CBAJ_P0029003 Mrpl55 protein_coding protein_coding MGP_CBAJ_T0029004.1 MGP_CBAJ_G0018118.1 mouse_genomes_project 11 63545915 63551818 + MGP_CBAJ_P0029004 Mrpl55 protein_coding protein_coding MGP_CBAJ_T0031360.1 MGP_CBAJ_G0018681.1 mouse_genomes_project 11 103555221 103619000 - MGP_CBAJ_P0031360 Abcc3 protein_coding protein_coding MGP_CBAJ_T0031361.1 MGP_CBAJ_G0018681.1 mouse_genomes_project 11 103555224 103619000 - MGP_CBAJ_P0031361 Abcc3 protein_coding protein_coding MGP_CBAJ_T0031362.1 MGP_CBAJ_G0018681.1 mouse_genomes_project 11 103555579 103566142 - Abcc3 protein_coding processed_transcript MGP_CBAJ_T0031363.1 MGP_CBAJ_G0018681.1 mouse_genomes_project 11 103579090 103585707 - Abcc3 protein_coding processed_transcript MGP_CBAJ_T0031364.1 MGP_CBAJ_G0018681.1 mouse_genomes_project 11 103579738 103618944 - Abcc3 protein_coding processed_transcript MGP_CBAJ_T0031365.1 MGP_CBAJ_G0018681.1 mouse_genomes_project 11 103592347 103619021 - Abcc3 protein_coding processed_transcript MGP_CBAJ_T0012572.1 MGP_CBAJ_G0010684.1 mouse_genomes_project 11 109971019 109971172 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0033911.1 MGP_CBAJ_G0019268.1 mouse_genomes_project 11 134830251 134847946 + MGP_CBAJ_P0033911 Fn3k protein_coding protein_coding MGP_CBAJ_T0033912.1 MGP_CBAJ_G0019268.1 mouse_genomes_project 11 134830305 134840436 + MGP_CBAJ_P0033912 Fn3k protein_coding protein_coding MGP_CBAJ_T0033913.1 MGP_CBAJ_G0019268.1 mouse_genomes_project 11 134830306 134840960 + MGP_CBAJ_P0033913 Fn3k protein_coding protein_coding MGP_CBAJ_T0033926.1 MGP_CBAJ_G0019272.1 mouse_genomes_project 11 135130720 135144153 + MGP_CBAJ_P0033926 Metrnl protein_coding protein_coding MGP_CBAJ_T0033927.1 MGP_CBAJ_G0019272.1 mouse_genomes_project 11 135130857 135143926 + MGP_CBAJ_P0033927 Metrnl protein_coding protein_coding MGP_CBAJ_T0012367.1 MGP_CBAJ_G0010479.1 mouse_genomes_project 11 20504321 20504923 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003066.1 MGP_CBAJ_G0002849.1 mouse_genomes_project 11 30459219 30460942 + Gm29237 antisense antisense MGP_CBAJ_T0033087.1 MGP_CBAJ_G0019110.1 mouse_genomes_project 11 127994396 128016807 + MGP_CBAJ_P0033087 Armc7 protein_coding protein_coding MGP_CBAJ_T0033088.1 MGP_CBAJ_G0019110.1 mouse_genomes_project 11 127994427 128004379 + Armc7 protein_coding processed_transcript MGP_CBAJ_T0033089.1 MGP_CBAJ_G0019110.1 mouse_genomes_project 11 127994471 128005892 + Armc7 protein_coding processed_transcript MGP_CBAJ_T0033090.1 MGP_CBAJ_G0019110.1 mouse_genomes_project 11 127994683 128015402 + Armc7 protein_coding processed_transcript MGP_CBAJ_T0012620.1 MGP_CBAJ_G0010732.1 mouse_genomes_project 11 129949385 129949833 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009532.1 MGP_CBAJ_G0007670.1 mouse_genomes_project 11 2415173 2415277 + miRNA miRNA MGP_CBAJ_T0012597.1 MGP_CBAJ_G0010709.1 mouse_genomes_project 11 118678188 118678521 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099909.1 MGP_CBAJ_G0038164.1 mouse_genomes_project 11 22359361 22359463 + Gm23772 snoRNA snoRNA MGP_CBAJ_T0012317.1 MGP_CBAJ_G0010429.1 mouse_genomes_project 11 3106756 3107200 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0027744.1 MGP_CBAJ_G0017772.1 mouse_genomes_project 11 9465039 9679235 - MGP_CBAJ_P0027744 Zpbp protein_coding protein_coding MGP_CBAJ_T0032310.1 MGP_CBAJ_G0018944.1 mouse_genomes_project 11 112860213 112885768 - MGP_CBAJ_P0032310 Lsm12 protein_coding protein_coding MGP_CBAJ_T0032311.1 MGP_CBAJ_G0018944.1 mouse_genomes_project 11 112860213 112885835 - MGP_CBAJ_P0032311 Lsm12 protein_coding protein_coding MGP_CBAJ_T0032312.1 MGP_CBAJ_G0018944.1 mouse_genomes_project 11 112861669 112880948 - Lsm12 protein_coding processed_transcript MGP_CBAJ_T0032313.1 MGP_CBAJ_G0018944.1 mouse_genomes_project 11 112861833 112885796 - Lsm12 protein_coding processed_transcript MGP_CBAJ_T0098692.1 MGP_CBAJ_G0036947.1 mouse_genomes_project 11 70801506 70801616 + Gm26128 snRNA snRNA MGP_CBAJ_T0030490.1 MGP_CBAJ_G0018466.1 mouse_genomes_project 11 83861468 83899450 - MGP_CBAJ_P0030490 Nsrp1 protein_coding protein_coding MGP_CBAJ_T0030491.1 MGP_CBAJ_G0018466.1 mouse_genomes_project 11 83867843 83899052 - MGP_CBAJ_P0030491 Nsrp1 protein_coding protein_coding MGP_CBAJ_T0030492.1 MGP_CBAJ_G0018466.1 mouse_genomes_project 11 83874939 83899450 - Nsrp1 protein_coding processed_transcript MGP_CBAJ_T0028565.1 MGP_CBAJ_G0017981.1 mouse_genomes_project 11 53932296 53945705 - MGP_CBAJ_P0028565 Zfp454 protein_coding protein_coding MGP_CBAJ_T0028566.1 MGP_CBAJ_G0017981.1 mouse_genomes_project 11 53933464 53946953 - Zfp454 protein_coding processed_transcript MGP_CBAJ_T0028567.1 MGP_CBAJ_G0017981.1 mouse_genomes_project 11 53937185 53946953 - MGP_CBAJ_P0028567 Zfp454 protein_coding protein_coding MGP_CBAJ_T0028568.1 MGP_CBAJ_G0017981.1 mouse_genomes_project 11 53937397 53946832 - Zfp454 protein_coding processed_transcript MGP_CBAJ_T0032189.1 MGP_CBAJ_G0018918.1 mouse_genomes_project 11 111973291 111993588 - MGP_CBAJ_P0032189 Gm27029 protein_coding protein_coding MGP_CBAJ_T0032191.1 MGP_CBAJ_G0018918.1 mouse_genomes_project 11 111973466 111993865 - MGP_CBAJ_P0032191 Gm27029 protein_coding protein_coding MGP_CBAJ_T0033030.1 MGP_CBAJ_G0019097.1 mouse_genomes_project 11 127745580 127761763 - MGP_CBAJ_P0033030 Grin2c protein_coding protein_coding MGP_CBAJ_T0033031.1 MGP_CBAJ_G0019097.1 mouse_genomes_project 11 127745580 127763577 - MGP_CBAJ_P0033031 Grin2c protein_coding protein_coding MGP_CBAJ_T0032915.1 MGP_CBAJ_G0019069.1 mouse_genomes_project 11 125463821 125836004 - MGP_CBAJ_P0032915 Slc39a11 protein_coding unknown_likely_coding MGP_CBAJ_T0032916.1 MGP_CBAJ_G0019069.1 mouse_genomes_project 11 125463825 125835980 - MGP_CBAJ_P0032916 Slc39a11 protein_coding protein_coding MGP_CBAJ_T0032917.1 MGP_CBAJ_G0019069.1 mouse_genomes_project 11 125463825 125835989 - MGP_CBAJ_P0032917 Slc39a11 protein_coding protein_coding MGP_CBAJ_T0032918.1 MGP_CBAJ_G0019069.1 mouse_genomes_project 11 125604179 125934015 - MGP_CBAJ_P0032918 Slc39a11 protein_coding protein_coding MGP_CBAJ_T0032919.1 MGP_CBAJ_G0019069.1 mouse_genomes_project 11 125702081 125836000 - MGP_CBAJ_P0032919 Slc39a11 protein_coding protein_coding MGP_CBAJ_T0032920.1 MGP_CBAJ_G0019069.1 mouse_genomes_project 11 125783006 125934023 - MGP_CBAJ_P0032920 Slc39a11 protein_coding protein_coding MGP_CBAJ_T0032921.1 MGP_CBAJ_G0019069.1 mouse_genomes_project 11 125829700 125934014 - MGP_CBAJ_P0032921 Slc39a11 protein_coding protein_coding MGP_CBAJ_T0032922.1 MGP_CBAJ_G0019069.1 mouse_genomes_project 11 125847755 125934014 - Slc39a11 protein_coding processed_transcript MGP_CBAJ_T0028248.1 MGP_CBAJ_G0017891.1 mouse_genomes_project 11 42509326 42516086 - MGP_CBAJ_P0028248 Ccng1 protein_coding protein_coding MGP_CBAJ_T0028249.1 MGP_CBAJ_G0017891.1 mouse_genomes_project 11 42509864 42514713 - Ccng1 protein_coding processed_transcript MGP_CBAJ_T0012476.1 MGP_CBAJ_G0010588.1 mouse_genomes_project 11 64969505 64970266 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0003298.1 MGP_CBAJ_G0003040.1 mouse_genomes_project 11 134391819 134418293 + Gm11775 antisense antisense MGP_CBAJ_T0033465.1 MGP_CBAJ_G0019178.1 mouse_genomes_project 11 130833842 130839370 - Tha1 protein_coding processed_transcript MGP_CBAJ_T0033466.1 MGP_CBAJ_G0019178.1 mouse_genomes_project 11 130833842 130839348 - MGP_CBAJ_P0033466 Tha1 protein_coding protein_coding MGP_CBAJ_T0033467.1 MGP_CBAJ_G0019178.1 mouse_genomes_project 11 130835616 130837805 - Tha1 protein_coding processed_transcript MGP_CBAJ_T0032675.1 MGP_CBAJ_G0019017.1 mouse_genomes_project 11 117527696 117550595 - MGP_CBAJ_P0032675 Ccdc47 protein_coding protein_coding MGP_CBAJ_T0032676.1 MGP_CBAJ_G0019017.1 mouse_genomes_project 11 117535040 117538692 - MGP_CBAJ_P0032676 Ccdc47 protein_coding protein_coding MGP_CBAJ_T0032677.1 MGP_CBAJ_G0019017.1 mouse_genomes_project 11 117535879 117539699 - MGP_CBAJ_P0032677 Ccdc47 protein_coding protein_coding MGP_CBAJ_T0032678.1 MGP_CBAJ_G0019017.1 mouse_genomes_project 11 117536268 117537169 - MGP_CBAJ_P0032678 Ccdc47 protein_coding protein_coding MGP_CBAJ_T0032679.1 MGP_CBAJ_G0019017.1 mouse_genomes_project 11 117538556 117539806 - Ccdc47 protein_coding processed_transcript MGP_CBAJ_T0011676.1 MGP_CBAJ_G0009810.1 mouse_genomes_project 11 80740332 80741303 + MGP_CBAJ_P0011676 Olfr409-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0030639.1 MGP_CBAJ_G0018495.1 mouse_genomes_project 11 85297138 85300970 + 2610507B11Rik protein_coding processed_transcript MGP_CBAJ_T0030640.1 MGP_CBAJ_G0018495.1 mouse_genomes_project 11 85297138 85335174 + MGP_CBAJ_P0030640 2610507B11Rik protein_coding protein_coding MGP_CBAJ_T0030641.1 MGP_CBAJ_G0018495.1 mouse_genomes_project 11 85299409 85300904 + 2610507B11Rik protein_coding retained_intron MGP_CBAJ_T0030642.1 MGP_CBAJ_G0018495.1 mouse_genomes_project 11 85303070 85305122 + 2610507B11Rik protein_coding retained_intron MGP_CBAJ_T0030643.1 MGP_CBAJ_G0018495.1 mouse_genomes_project 11 85308912 85310366 + 2610507B11Rik protein_coding retained_intron MGP_CBAJ_T0030644.1 MGP_CBAJ_G0018495.1 mouse_genomes_project 11 85310092 85311829 + MGP_CBAJ_P0030644 2610507B11Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0030645.1 MGP_CBAJ_G0018495.1 mouse_genomes_project 11 85322352 85327556 + 2610507B11Rik protein_coding retained_intron MGP_CBAJ_T0030646.1 MGP_CBAJ_G0018495.1 mouse_genomes_project 11 85327512 85331285 + 2610507B11Rik protein_coding retained_intron MGP_CBAJ_T0101403.1 MGP_CBAJ_G0039459.1 mouse_genomes_project 11 113530758 113564866 + unitary_pseudogene unitary_pseudogene MGP_CBAJ_T0003194.1 MGP_CBAJ_G0002955.1 mouse_genomes_project 11 104674919 104689491 + Gm11520 antisense antisense MGP_CBAJ_T0028931.1 MGP_CBAJ_G0018083.1 mouse_genomes_project 11 62749165 62751945 - MGP_CBAJ_P0028931 protein_coding protein_coding MGP_CBAJ_T0028932.1 MGP_CBAJ_G0018083.1 mouse_genomes_project 11 62749802 62751959 - MGP_CBAJ_P0028932 protein_coding protein_coding MGP_CBAJ_T0033735.1 MGP_CBAJ_G0019234.1 mouse_genomes_project 11 133907769 133908386 + MGP_CBAJ_P0033735 Npb protein_coding protein_coding MGP_CBAJ_T0033736.1 MGP_CBAJ_G0019234.1 mouse_genomes_project 11 133907769 133908386 + MGP_CBAJ_P0033736 Npb protein_coding protein_coding MGP_CBAJ_T0033737.1 MGP_CBAJ_G0019234.1 mouse_genomes_project 11 133907797 133908326 + MGP_CBAJ_P0033737 Npb protein_coding protein_coding MGP_CBAJ_T0012593.1 MGP_CBAJ_G0010705.1 mouse_genomes_project 11 116376822 116378667 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0030313.1 MGP_CBAJ_G0018426.1 mouse_genomes_project 11 81444790 81708090 + MGP_CBAJ_P0030313 Smg6 protein_coding protein_coding MGP_CBAJ_T0030314.1 MGP_CBAJ_G0018426.1 mouse_genomes_project 11 81449489 81708090 + MGP_CBAJ_P0030314 Smg6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030315.1 MGP_CBAJ_G0018426.1 mouse_genomes_project 11 81510844 81513690 + Smg6 protein_coding retained_intron MGP_CBAJ_T0030316.1 MGP_CBAJ_G0018426.1 mouse_genomes_project 11 81515336 81678159 + MGP_CBAJ_P0030316 Smg6 protein_coding protein_coding MGP_CBAJ_T0030317.1 MGP_CBAJ_G0018426.1 mouse_genomes_project 11 81671224 81678159 + Smg6 protein_coding processed_transcript MGP_CBAJ_T0030318.1 MGP_CBAJ_G0018426.1 mouse_genomes_project 11 81703284 81706823 + Smg6 protein_coding processed_transcript MGP_CBAJ_T0000818.1 MGP_CBAJ_G0000754.1 mouse_genomes_project 11 133878097 133879265 + TEC TEC MGP_CBAJ_T0009567.1 MGP_CBAJ_G0007705.1 mouse_genomes_project 11 64690007 64690073 - Mir6922 miRNA miRNA MGP_CBAJ_T0028668.1 MGP_CBAJ_G0018008.1 mouse_genomes_project 11 55610836 55623918 + MGP_CBAJ_P0028668 Skp1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0028669.1 MGP_CBAJ_G0018008.1 mouse_genomes_project 11 55610875 55625058 + MGP_CBAJ_P0028669 Skp1a protein_coding protein_coding MGP_CBAJ_T0028670.1 MGP_CBAJ_G0018008.1 mouse_genomes_project 11 55610878 55617255 + Skp1a protein_coding retained_intron MGP_CBAJ_T0028671.1 MGP_CBAJ_G0018008.1 mouse_genomes_project 11 55610878 55623921 + MGP_CBAJ_P0028671 Skp1a protein_coding protein_coding MGP_CBAJ_T0028672.1 MGP_CBAJ_G0018008.1 mouse_genomes_project 11 55615694 55624876 + MGP_CBAJ_P0028672 Skp1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0012465.1 MGP_CBAJ_G0010577.1 mouse_genomes_project 11 61521157 61521895 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0033532.1 MGP_CBAJ_G0019193.1 mouse_genomes_project 11 132085597 132093020 - MGP_CBAJ_P0033532 Cbx8 protein_coding protein_coding MGP_CBAJ_T0033533.1 MGP_CBAJ_G0019193.1 mouse_genomes_project 11 132091103 132092882 - Cbx8 protein_coding processed_transcript MGP_CBAJ_T0033534.1 MGP_CBAJ_G0019193.1 mouse_genomes_project 11 132091234 132092962 - Cbx8 protein_coding processed_transcript MGP_CBAJ_T0012560.1 MGP_CBAJ_G0010672.1 mouse_genomes_project 11 102776118 102777329 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0030438.1 MGP_CBAJ_G0018454.1 mouse_genomes_project 11 82942026 82943087 + MGP_CBAJ_P0030438 Dbil5 protein_coding protein_coding MGP_CBAJ_T0011172.1 MGP_CBAJ_G0009310.1 mouse_genomes_project 11 44895013 44895325 + Gm25543 misc_RNA misc_RNA MGP_CBAJ_T0099921.1 MGP_CBAJ_G0038176.1 mouse_genomes_project 11 51523599 51523680 + Snord96a snoRNA snoRNA MGP_CBAJ_T0031656.1 MGP_CBAJ_G0018757.1 mouse_genomes_project 11 107179282 107273973 + MGP_CBAJ_P0031656 Arhgap23 protein_coding protein_coding MGP_CBAJ_T0031657.1 MGP_CBAJ_G0018757.1 mouse_genomes_project 11 107179354 107263256 + MGP_CBAJ_P0031657 Arhgap23 protein_coding unknown_likely_coding MGP_CBAJ_T0031658.1 MGP_CBAJ_G0018757.1 mouse_genomes_project 11 107205472 107213413 + Arhgap23 protein_coding processed_transcript MGP_CBAJ_T0031659.1 MGP_CBAJ_G0018757.1 mouse_genomes_project 11 107219362 107273971 + MGP_CBAJ_P0031659 Arhgap23 protein_coding protein_coding MGP_CBAJ_T0031660.1 MGP_CBAJ_G0018757.1 mouse_genomes_project 11 107221358 107273973 + MGP_CBAJ_P0031660 Arhgap23 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031662.1 MGP_CBAJ_G0018757.1 mouse_genomes_project 11 107262725 107273969 + MGP_CBAJ_P0031662 Arhgap23 protein_coding protein_coding MGP_CBAJ_T0030937.1 MGP_CBAJ_G0018578.1 mouse_genomes_project 11 91274468 91280185 - MGP_CBAJ_P0030937 Ccl9 protein_coding protein_coding MGP_CBAJ_T0030938.1 MGP_CBAJ_G0018578.1 mouse_genomes_project 11 91276866 91278691 - Ccl9 protein_coding processed_transcript MGP_CBAJ_T0028004.1 MGP_CBAJ_G0017831.1 mouse_genomes_project 11 29386445 29418709 + Pnpt1 protein_coding processed_transcript MGP_CBAJ_T0028005.1 MGP_CBAJ_G0017831.1 mouse_genomes_project 11 29386449 29391265 + Pnpt1 protein_coding processed_transcript MGP_CBAJ_T0028006.1 MGP_CBAJ_G0017831.1 mouse_genomes_project 11 29386449 29418857 + MGP_CBAJ_P0028006 Pnpt1 protein_coding protein_coding MGP_CBAJ_T0028007.1 MGP_CBAJ_G0017831.1 mouse_genomes_project 11 29393900 29401182 + Pnpt1 protein_coding processed_transcript MGP_CBAJ_T0012566.1 MGP_CBAJ_G0010678.1 mouse_genomes_project 11 106504947 106505753 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0032526.1 MGP_CBAJ_G0018980.1 mouse_genomes_project 11 114126149 114136466 - MGP_CBAJ_P0032526 Spata32 protein_coding protein_coding MGP_CBAJ_T0029732.1 MGP_CBAJ_G0018281.1 mouse_genomes_project 11 75641666 75647245 - MGP_CBAJ_P0029732 Fgf11 protein_coding protein_coding MGP_CBAJ_T0029733.1 MGP_CBAJ_G0018281.1 mouse_genomes_project 11 75641671 75647386 - MGP_CBAJ_P0029733 Fgf11 protein_coding protein_coding MGP_CBAJ_T0101256.1 MGP_CBAJ_G0039391.1 mouse_genomes_project 11 3264369 3290166 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101257.1 MGP_CBAJ_G0039391.1 mouse_genomes_project 11 3264390 3290530 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101258.1 MGP_CBAJ_G0039391.1 mouse_genomes_project 11 3264390 3293000 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101259.1 MGP_CBAJ_G0039391.1 mouse_genomes_project 11 3264457 3292227 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101260.1 MGP_CBAJ_G0039391.1 mouse_genomes_project 11 3270605 3292718 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0099894.1 MGP_CBAJ_G0038149.1 mouse_genomes_project 11 582503 582620 - Gm24439 snoRNA snoRNA MGP_CBAJ_T0031940.1 MGP_CBAJ_G0018855.1 mouse_genomes_project 11 110360417 110368888 - MGP_CBAJ_P0031940 Krt33b protein_coding protein_coding MGP_CBAJ_T0029581.1 MGP_CBAJ_G0018245.1 mouse_genomes_project 11 74822297 74836346 + MGP_CBAJ_P0029581 Per1 protein_coding protein_coding MGP_CBAJ_T0029582.1 MGP_CBAJ_G0018245.1 mouse_genomes_project 11 74828832 74839849 + MGP_CBAJ_P0029582 Per1 protein_coding protein_coding MGP_CBAJ_T0029583.1 MGP_CBAJ_G0018245.1 mouse_genomes_project 11 74830036 74830933 + MGP_CBAJ_P0029583 Per1 protein_coding protein_coding MGP_CBAJ_T0029584.1 MGP_CBAJ_G0018245.1 mouse_genomes_project 11 74830042 74839837 + MGP_CBAJ_P0029584 Per1 protein_coding protein_coding MGP_CBAJ_T0029585.1 MGP_CBAJ_G0018245.1 mouse_genomes_project 11 74830393 74836184 + MGP_CBAJ_P0029585 Per1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029586.1 MGP_CBAJ_G0018245.1 mouse_genomes_project 11 74830406 74839849 + MGP_CBAJ_P0029586 Per1 protein_coding protein_coding MGP_CBAJ_T0031914.1 MGP_CBAJ_G0018829.1 mouse_genomes_project 11 109798266 109799145 - MGP_CBAJ_P0031914 Krtap1-3 protein_coding protein_coding MGP_CBAJ_T0032422.1 MGP_CBAJ_G0018958.1 mouse_genomes_project 11 113231163 113320071 - MGP_CBAJ_P0032422 Gpatch8 protein_coding protein_coding MGP_CBAJ_T0032423.1 MGP_CBAJ_G0018958.1 mouse_genomes_project 11 113232455 113268730 - Gpatch8 protein_coding processed_transcript MGP_CBAJ_T0032424.1 MGP_CBAJ_G0018958.1 mouse_genomes_project 11 113267776 113320071 - Gpatch8 protein_coding processed_transcript MGP_CBAJ_T0032425.1 MGP_CBAJ_G0018958.1 mouse_genomes_project 11 113268455 113320071 - Gpatch8 protein_coding processed_transcript MGP_CBAJ_T0032426.1 MGP_CBAJ_G0018958.1 mouse_genomes_project 11 113301006 113320048 - Gpatch8 protein_coding processed_transcript MGP_CBAJ_T0032427.1 MGP_CBAJ_G0018958.1 mouse_genomes_project 11 113301896 113320264 - Gpatch8 protein_coding processed_transcript MGP_CBAJ_T0029737.1 MGP_CBAJ_G0018285.1 mouse_genomes_project 11 75669149 75683808 - MGP_CBAJ_P0029737 Nlgn2 protein_coding protein_coding MGP_CBAJ_T0029738.1 MGP_CBAJ_G0018285.1 mouse_genomes_project 11 75669149 75680873 - MGP_CBAJ_P0029738 Nlgn2 protein_coding protein_coding MGP_CBAJ_T0029739.1 MGP_CBAJ_G0018285.1 mouse_genomes_project 11 75673763 75680283 - MGP_CBAJ_P0029739 Nlgn2 protein_coding protein_coding MGP_CBAJ_T0029740.1 MGP_CBAJ_G0018285.1 mouse_genomes_project 11 75674068 75674584 - Nlgn2 protein_coding retained_intron MGP_CBAJ_T0033726.1 MGP_CBAJ_G0019231.1 mouse_genomes_project 11 133874531 133878052 - MGP_CBAJ_P0033726 Arhgdia protein_coding protein_coding MGP_CBAJ_T0033727.1 MGP_CBAJ_G0019231.1 mouse_genomes_project 11 133874536 133877808 - MGP_CBAJ_P0033727 Arhgdia protein_coding protein_coding MGP_CBAJ_T0012393.1 MGP_CBAJ_G0010505.1 mouse_genomes_project 11 29623759 29624017 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012433.1 MGP_CBAJ_G0010545.1 mouse_genomes_project 11 49396331 49396676 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0030675.1 MGP_CBAJ_G0018501.1 mouse_genomes_project 11 85415322 85429727 - MGP_CBAJ_P0030675 Foxn1 protein_coding protein_coding MGP_CBAJ_T0028888.1 MGP_CBAJ_G0018068.1 mouse_genomes_project 11 62193363 62249000 + MGP_CBAJ_P0028888 Larp1 protein_coding protein_coding MGP_CBAJ_T0028889.1 MGP_CBAJ_G0018068.1 mouse_genomes_project 11 62193363 62249003 + MGP_CBAJ_P0028889 Larp1 protein_coding protein_coding MGP_CBAJ_T0028890.1 MGP_CBAJ_G0018068.1 mouse_genomes_project 11 62225477 62226877 + Larp1 protein_coding retained_intron MGP_CBAJ_T0030676.1 MGP_CBAJ_G0018502.1 mouse_genomes_project 11 85453172 85454715 - MGP_CBAJ_P0030676 Oxct2a protein_coding protein_coding MGP_CBAJ_T0028927.1 MGP_CBAJ_G0018079.1 mouse_genomes_project 11 62681028 62685941 + MGP_CBAJ_P0028927 1810065E05Rik protein_coding protein_coding MGP_CBAJ_T0098676.1 MGP_CBAJ_G0036931.1 mouse_genomes_project 11 24241750 24241823 - Gm22787 snRNA snRNA MGP_CBAJ_T0030267.1 MGP_CBAJ_G0018417.1 mouse_genomes_project 11 80829105 81060758 - MGP_CBAJ_P0030267 Rap1gap2 protein_coding protein_coding MGP_CBAJ_T0030268.1 MGP_CBAJ_G0018417.1 mouse_genomes_project 11 80829232 81060730 - MGP_CBAJ_P0030268 Rap1gap2 protein_coding protein_coding MGP_CBAJ_T0030269.1 MGP_CBAJ_G0018417.1 mouse_genomes_project 11 80829233 80860151 - Rap1gap2 protein_coding processed_transcript MGP_CBAJ_T0030270.1 MGP_CBAJ_G0018417.1 mouse_genomes_project 11 80831686 80982579 - MGP_CBAJ_P0030270 Rap1gap2 protein_coding unknown_likely_coding MGP_CBAJ_T0030271.1 MGP_CBAJ_G0018417.1 mouse_genomes_project 11 80890195 81060696 - MGP_CBAJ_P0030271 Rap1gap2 protein_coding protein_coding MGP_CBAJ_T0003167.1 MGP_CBAJ_G0002936.1 mouse_genomes_project 11 88251440 88259346 - 4930507D10Rik antisense antisense MGP_CBAJ_T0029011.1 MGP_CBAJ_G0018124.1 mouse_genomes_project 11 63786535 63833324 - MGP_CBAJ_P0029011 Snap47 protein_coding protein_coding MGP_CBAJ_T0029012.1 MGP_CBAJ_G0018124.1 mouse_genomes_project 11 63786545 63833332 - MGP_CBAJ_P0029012 Snap47 protein_coding protein_coding MGP_CBAJ_T0029013.1 MGP_CBAJ_G0018124.1 mouse_genomes_project 11 63808208 63833324 - MGP_CBAJ_P0029013 Snap47 protein_coding protein_coding MGP_CBAJ_T0029014.1 MGP_CBAJ_G0018124.1 mouse_genomes_project 11 63818466 63833324 - MGP_CBAJ_P0029014 Snap47 protein_coding protein_coding MGP_CBAJ_T0029015.1 MGP_CBAJ_G0018124.1 mouse_genomes_project 11 63818688 63831003 - MGP_CBAJ_P0029015 Snap47 protein_coding protein_coding MGP_CBAJ_T0029016.1 MGP_CBAJ_G0018124.1 mouse_genomes_project 11 63818881 63834511 - MGP_CBAJ_P0029016 Snap47 protein_coding protein_coding MGP_CBAJ_T0032914.1 MGP_CBAJ_G0019068.1 mouse_genomes_project 11 124950883 124962491 + MGP_CBAJ_P0032914 Sox9 protein_coding protein_coding MGP_CBAJ_T0030825.1 MGP_CBAJ_G0018539.1 mouse_genomes_project 11 87828280 87832442 + MGP_CBAJ_P0030825 Cdk5r1 protein_coding protein_coding MGP_CBAJ_T0030826.1 MGP_CBAJ_G0018539.1 mouse_genomes_project 11 87828313 87829181 + MGP_CBAJ_P0030826 Cdk5r1 protein_coding protein_coding MGP_CBAJ_T0006125.1 MGP_CBAJ_G0005107.1 mouse_genomes_project 11 33703133 33730871 - Gm12111 lincRNA lincRNA MGP_CBAJ_T0029674.1 MGP_CBAJ_G0018270.1 mouse_genomes_project 11 75467702 75476489 - MGP_CBAJ_P0029674 Mpdu1 protein_coding protein_coding MGP_CBAJ_T0029675.1 MGP_CBAJ_G0018270.1 mouse_genomes_project 11 75467966 75476411 - MGP_CBAJ_P0029675 Mpdu1 protein_coding protein_coding MGP_CBAJ_T0029676.1 MGP_CBAJ_G0018270.1 mouse_genomes_project 11 75468032 75476434 - MGP_CBAJ_P0029676 Mpdu1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029677.1 MGP_CBAJ_G0018270.1 mouse_genomes_project 11 75468134 75469286 - Mpdu1 protein_coding retained_intron MGP_CBAJ_T0029678.1 MGP_CBAJ_G0018270.1 mouse_genomes_project 11 75468159 75476434 - MGP_CBAJ_P0029678 Mpdu1 protein_coding protein_coding MGP_CBAJ_T0029679.1 MGP_CBAJ_G0018270.1 mouse_genomes_project 11 75468167 75476365 - MGP_CBAJ_P0029679 Mpdu1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029680.1 MGP_CBAJ_G0018270.1 mouse_genomes_project 11 75468218 75469259 - Mpdu1 protein_coding retained_intron MGP_CBAJ_T0029681.1 MGP_CBAJ_G0018270.1 mouse_genomes_project 11 75468738 75476351 - Mpdu1 protein_coding retained_intron MGP_CBAJ_T0029682.1 MGP_CBAJ_G0018270.1 mouse_genomes_project 11 75469352 75476407 - Mpdu1 protein_coding retained_intron MGP_CBAJ_T0029683.1 MGP_CBAJ_G0018270.1 mouse_genomes_project 11 75469481 75470411 - Mpdu1 protein_coding retained_intron MGP_CBAJ_T0012512.1 MGP_CBAJ_G0010624.1 mouse_genomes_project 11 80126389 80126586 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009627.1 MGP_CBAJ_G0007765.1 mouse_genomes_project 11 110878549 110878619 - Mir7116 miRNA miRNA MGP_CBAJ_T0029281.1 MGP_CBAJ_G0018179.1 mouse_genomes_project 11 67048405 67049521 + Ttc19 protein_coding processed_transcript MGP_CBAJ_T0029282.1 MGP_CBAJ_G0018179.1 mouse_genomes_project 11 67048414 67084108 + MGP_CBAJ_P0029282 Ttc19 protein_coding protein_coding MGP_CBAJ_T0029283.1 MGP_CBAJ_G0018179.1 mouse_genomes_project 11 67048416 67085288 + MGP_CBAJ_P0029283 Ttc19 protein_coding protein_coding MGP_CBAJ_T0029284.1 MGP_CBAJ_G0018179.1 mouse_genomes_project 11 67050604 67096791 + MGP_CBAJ_P0029284 Ttc19 protein_coding protein_coding MGP_CBAJ_T0029285.1 MGP_CBAJ_G0018179.1 mouse_genomes_project 11 67075989 67097066 + Ttc19 protein_coding processed_transcript MGP_CBAJ_T0009626.1 MGP_CBAJ_G0007764.1 mouse_genomes_project 11 110835348 110835429 - Gm27374 miRNA miRNA MGP_CBAJ_T0032644.1 MGP_CBAJ_G0019007.1 mouse_genomes_project 11 117232897 117243352 - MGP_CBAJ_P0032644 Cyb561 protein_coding protein_coding MGP_CBAJ_T0032645.1 MGP_CBAJ_G0019007.1 mouse_genomes_project 11 117234287 117243336 - MGP_CBAJ_P0032645 Cyb561 protein_coding protein_coding MGP_CBAJ_T0032646.1 MGP_CBAJ_G0019007.1 mouse_genomes_project 11 117234692 117235381 - Cyb561 protein_coding processed_transcript MGP_CBAJ_T0032647.1 MGP_CBAJ_G0019007.1 mouse_genomes_project 11 117235002 117254182 - MGP_CBAJ_P0032647 Cyb561 protein_coding protein_coding MGP_CBAJ_T0032648.1 MGP_CBAJ_G0019007.1 mouse_genomes_project 11 117235413 117243626 - MGP_CBAJ_P0032648 Cyb561 protein_coding protein_coding MGP_CBAJ_T0032649.1 MGP_CBAJ_G0019007.1 mouse_genomes_project 11 117235758 117243684 - MGP_CBAJ_P0032649 Cyb561 protein_coding protein_coding MGP_CBAJ_T0030210.1 MGP_CBAJ_G0018385.1 mouse_genomes_project 11 79599360 79619014 - MGP_CBAJ_P0030210 Aspa protein_coding protein_coding MGP_CBAJ_T0030211.1 MGP_CBAJ_G0018385.1 mouse_genomes_project 11 79599360 79626003 - MGP_CBAJ_P0030211 Aspa protein_coding protein_coding MGP_CBAJ_T0030212.1 MGP_CBAJ_G0018385.1 mouse_genomes_project 11 79607917 79620839 - MGP_CBAJ_P0030212 Aspa protein_coding protein_coding MGP_CBAJ_T0030213.1 MGP_CBAJ_G0018385.1 mouse_genomes_project 11 79610394 79618717 - Aspa protein_coding retained_intron MGP_CBAJ_T0030214.1 MGP_CBAJ_G0018385.1 mouse_genomes_project 11 79614226 79621169 - MGP_CBAJ_P0030214 Aspa protein_coding protein_coding MGP_CBAJ_T0030215.1 MGP_CBAJ_G0018385.1 mouse_genomes_project 11 79616611 79618994 - MGP_CBAJ_P0030215 Aspa protein_coding nonsense_mediated_decay MGP_CBAJ_T0033315.1 MGP_CBAJ_G0019149.1 mouse_genomes_project 11 129197818 129219659 - Prpsap1 protein_coding processed_transcript MGP_CBAJ_T0033316.1 MGP_CBAJ_G0019149.1 mouse_genomes_project 11 129197818 129219693 - MGP_CBAJ_P0033316 Prpsap1 protein_coding protein_coding MGP_CBAJ_T0033317.1 MGP_CBAJ_G0019149.1 mouse_genomes_project 11 129198272 129205310 - Prpsap1 protein_coding processed_transcript MGP_CBAJ_T0033318.1 MGP_CBAJ_G0019149.1 mouse_genomes_project 11 129198349 129200217 - Prpsap1 protein_coding processed_transcript MGP_CBAJ_T0033319.1 MGP_CBAJ_G0019149.1 mouse_genomes_project 11 129198373 129204729 - Prpsap1 protein_coding processed_transcript MGP_CBAJ_T0033320.1 MGP_CBAJ_G0019149.1 mouse_genomes_project 11 129205049 129223574 - MGP_CBAJ_P0033320 Prpsap1 protein_coding protein_coding MGP_CBAJ_T0033321.1 MGP_CBAJ_G0019149.1 mouse_genomes_project 11 129205281 129219634 - Prpsap1 protein_coding processed_transcript MGP_CBAJ_T0033322.1 MGP_CBAJ_G0019149.1 mouse_genomes_project 11 129205523 129219680 - MGP_CBAJ_P0033322 Prpsap1 protein_coding protein_coding MGP_CBAJ_T0033323.1 MGP_CBAJ_G0019149.1 mouse_genomes_project 11 129214841 129219672 - Prpsap1 protein_coding processed_transcript MGP_CBAJ_T0009579.1 MGP_CBAJ_G0007717.1 mouse_genomes_project 11 75730302 75730365 - Mir6924 miRNA miRNA MGP_CBAJ_T0030852.1 MGP_CBAJ_G0018553.1 mouse_genomes_project 11 90258023 90304593 - MGP_CBAJ_P0030852 Cct6b protein_coding protein_coding MGP_CBAJ_T0030853.1 MGP_CBAJ_G0018553.1 mouse_genomes_project 11 90258023 90304608 - MGP_CBAJ_P0030853 Cct6b protein_coding protein_coding MGP_CBAJ_T0033003.1 MGP_CBAJ_G0019091.1 mouse_genomes_project 11 127521409 127534490 - MGP_CBAJ_P0033003 Cd300e protein_coding protein_coding MGP_CBAJ_T0031880.1 MGP_CBAJ_G0018808.1 mouse_genomes_project 11 109189835 109216896 - MGP_CBAJ_P0031880 Tns4 protein_coding protein_coding MGP_CBAJ_T0031881.1 MGP_CBAJ_G0018808.1 mouse_genomes_project 11 109192326 109198012 - Tns4 protein_coding processed_transcript MGP_CBAJ_T0031882.1 MGP_CBAJ_G0018808.1 mouse_genomes_project 11 109194831 109199489 - Tns4 protein_coding retained_intron MGP_CBAJ_T0031883.1 MGP_CBAJ_G0018808.1 mouse_genomes_project 11 109213049 109216875 - Tns4 protein_coding retained_intron MGP_CBAJ_T0012529.1 MGP_CBAJ_G0010641.1 mouse_genomes_project 11 85817565 85818589 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006174.1 MGP_CBAJ_G0005151.1 mouse_genomes_project 11 76619169 76621704 - Gm12315 lincRNA lincRNA MGP_CBAJ_T0101538.1 MGP_CBAJ_G0039570.1 mouse_genomes_project 11 62733504 62734444 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0012598.1 MGP_CBAJ_G0010710.1 mouse_genomes_project 11 118700018 118700555 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016946.1 MGP_CBAJ_G0014917.1 mouse_genomes_project 11 71407232 71569206 + Gm12296 processed_transcript processed_transcript MGP_CBAJ_T0028640.1 MGP_CBAJ_G0018002.1 mouse_genomes_project 11 55039448 55067632 + MGP_CBAJ_P0028640 Sar1b protein_coding protein_coding MGP_CBAJ_T0028641.1 MGP_CBAJ_G0018002.1 mouse_genomes_project 11 55039455 55058504 + Sar1b protein_coding processed_transcript MGP_CBAJ_T0029410.1 MGP_CBAJ_G0018207.1 mouse_genomes_project 11 71459971 71813060 - MGP_CBAJ_P0029410 Shisa6 protein_coding protein_coding MGP_CBAJ_T0029411.1 MGP_CBAJ_G0018207.1 mouse_genomes_project 11 71465373 71813060 - MGP_CBAJ_P0029411 Shisa6 protein_coding protein_coding MGP_CBAJ_T0029412.1 MGP_CBAJ_G0018207.1 mouse_genomes_project 11 71649871 71788834 - Shisa6 protein_coding processed_transcript MGP_CBAJ_T0029985.1 MGP_CBAJ_G0018335.1 mouse_genomes_project 11 76661160 76664763 + MGP_CBAJ_P0029985 Eno3 protein_coding protein_coding MGP_CBAJ_T0029986.1 MGP_CBAJ_G0018335.1 mouse_genomes_project 11 76661160 76669982 + MGP_CBAJ_P0029986 Eno3 protein_coding protein_coding MGP_CBAJ_T0029987.1 MGP_CBAJ_G0018335.1 mouse_genomes_project 11 76661162 76669982 + MGP_CBAJ_P0029987 Eno3 protein_coding protein_coding MGP_CBAJ_T0029988.1 MGP_CBAJ_G0018335.1 mouse_genomes_project 11 76661243 76662376 + MGP_CBAJ_P0029988 Eno3 protein_coding protein_coding MGP_CBAJ_T0029989.1 MGP_CBAJ_G0018335.1 mouse_genomes_project 11 76661645 76662405 + MGP_CBAJ_P0029989 Eno3 protein_coding protein_coding MGP_CBAJ_T0029990.1 MGP_CBAJ_G0018335.1 mouse_genomes_project 11 76661753 76669979 + MGP_CBAJ_P0029990 Eno3 protein_coding protein_coding MGP_CBAJ_T0029991.1 MGP_CBAJ_G0018335.1 mouse_genomes_project 11 76662296 76664802 + Eno3 protein_coding retained_intron MGP_CBAJ_T0029992.1 MGP_CBAJ_G0018335.1 mouse_genomes_project 11 76664730 76669733 + MGP_CBAJ_P0029992 Eno3 protein_coding protein_coding MGP_CBAJ_T0003047.1 MGP_CBAJ_G0002835.1 mouse_genomes_project 11 4963466 4966604 - antisense antisense MGP_CBAJ_T0031423.1 MGP_CBAJ_G0018693.1 mouse_genomes_project 11 103972739 103982525 - MGP_CBAJ_P0031423 Gm11541 protein_coding protein_coding MGP_CBAJ_T0030845.1 MGP_CBAJ_G0018551.1 mouse_genomes_project 11 89699798 89840186 - Ccl1 protein_coding processed_transcript MGP_CBAJ_T0030846.1 MGP_CBAJ_G0018551.1 mouse_genomes_project 11 89699798 89702924 - MGP_CBAJ_P0030846 Ccl1 protein_coding protein_coding MGP_CBAJ_T0030847.1 MGP_CBAJ_G0018551.1 mouse_genomes_project 11 89699800 89702924 - MGP_CBAJ_P0030847 Ccl1 protein_coding protein_coding MGP_CBAJ_T0003042.1 MGP_CBAJ_G0002831.1 mouse_genomes_project 11 1925745 1934237 - Gm11961 antisense antisense MGP_CBAJ_T0003043.1 MGP_CBAJ_G0002831.1 mouse_genomes_project 11 1931846 1936482 - Gm11961 antisense antisense MGP_CBAJ_T0009568.1 MGP_CBAJ_G0007706.1 mouse_genomes_project 11 64807640 64807758 - Gm27711 miRNA miRNA MGP_CBAJ_T0006168.1 MGP_CBAJ_G0005148.1 mouse_genomes_project 11 70434414 70444482 - Gm12295 lincRNA lincRNA MGP_CBAJ_T0006169.1 MGP_CBAJ_G0005148.1 mouse_genomes_project 11 70442588 70529005 - Gm12295 lincRNA lincRNA MGP_CBAJ_T0030401.1 MGP_CBAJ_G0018445.1 mouse_genomes_project 11 82380647 82419300 + MGP_CBAJ_P0030401 Ywhae protein_coding protein_coding MGP_CBAJ_T0030402.1 MGP_CBAJ_G0018445.1 mouse_genomes_project 11 82380691 82418080 + MGP_CBAJ_P0030402 Ywhae protein_coding nonsense_mediated_decay MGP_CBAJ_T0030403.1 MGP_CBAJ_G0018445.1 mouse_genomes_project 11 82380739 82408256 + Ywhae protein_coding retained_intron MGP_CBAJ_T0030404.1 MGP_CBAJ_G0018445.1 mouse_genomes_project 11 82380926 82408012 + MGP_CBAJ_P0030404 Ywhae protein_coding protein_coding MGP_CBAJ_T0030405.1 MGP_CBAJ_G0018445.1 mouse_genomes_project 11 82402531 82410623 + Ywhae protein_coding retained_intron MGP_CBAJ_T0098724.1 MGP_CBAJ_G0036979.1 mouse_genomes_project 11 108363726 108363817 - Gm25048 snRNA snRNA MGP_CBAJ_T0012406.1 MGP_CBAJ_G0010518.1 mouse_genomes_project 11 31640902 31641681 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0027430.1 MGP_CBAJ_G0017699.1 mouse_genomes_project 11 1192444 1215556 + MGP_CBAJ_P0027430 Gal3st1 protein_coding protein_coding MGP_CBAJ_T0027431.1 MGP_CBAJ_G0017699.1 mouse_genomes_project 11 1192521 1215545 + MGP_CBAJ_P0027431 Gal3st1 protein_coding protein_coding MGP_CBAJ_T0027432.1 MGP_CBAJ_G0017699.1 mouse_genomes_project 11 1198736 1215538 + MGP_CBAJ_P0027432 Gal3st1 protein_coding protein_coding MGP_CBAJ_T0028493.1 MGP_CBAJ_G0017966.1 mouse_genomes_project 11 52980650 53070231 + MGP_CBAJ_P0028493 Rnf130 protein_coding protein_coding MGP_CBAJ_T0028494.1 MGP_CBAJ_G0017966.1 mouse_genomes_project 11 53056005 53070425 + Rnf130 protein_coding processed_transcript MGP_CBAJ_T0028706.1 MGP_CBAJ_G0018019.1 mouse_genomes_project 11 57003223 57007392 - MGP_CBAJ_P0028706 Gm10447 protein_coding protein_coding MGP_CBAJ_T0098261.1 MGP_CBAJ_G0036533.1 mouse_genomes_project 11 76917920 76926036 + Gm19967 sense_intronic sense_intronic MGP_CBAJ_T0030830.1 MGP_CBAJ_G0018541.1 mouse_genomes_project 11 88204581 88221168 + MGP_CBAJ_P0030830 Tmem98 protein_coding protein_coding MGP_CBAJ_T0012473.1 MGP_CBAJ_G0010585.1 mouse_genomes_project 11 63984572 63985225 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099966.1 MGP_CBAJ_G0038221.1 mouse_genomes_project 11 129432048 129432123 + Snord1b snoRNA snoRNA MGP_CBAJ_T0030175.1 MGP_CBAJ_G0018373.1 mouse_genomes_project 11 79257708 79273770 + MGP_CBAJ_P0030175 P2rx1 protein_coding protein_coding MGP_CBAJ_T0030176.1 MGP_CBAJ_G0018373.1 mouse_genomes_project 11 79257920 79272696 + MGP_CBAJ_P0030176 P2rx1 protein_coding protein_coding MGP_CBAJ_T0030177.1 MGP_CBAJ_G0018373.1 mouse_genomes_project 11 79268360 79273767 + P2rx1 protein_coding retained_intron MGP_CBAJ_T0027538.1 MGP_CBAJ_G0017724.1 mouse_genomes_project 11 2441758 2446001 + MGP_CBAJ_P0027538 Rasl10a protein_coding protein_coding MGP_CBAJ_T0027539.1 MGP_CBAJ_G0017724.1 mouse_genomes_project 11 2444581 2445678 + Rasl10a protein_coding processed_transcript MGP_CBAJ_T0030506.1 MGP_CBAJ_G0018469.1 mouse_genomes_project 11 84333379 84341436 + MGP_CBAJ_P0030506 Coro6 protein_coding protein_coding MGP_CBAJ_T0030507.1 MGP_CBAJ_G0018469.1 mouse_genomes_project 11 84333613 84334922 + MGP_CBAJ_P0030507 Coro6 protein_coding protein_coding MGP_CBAJ_T0030508.1 MGP_CBAJ_G0018469.1 mouse_genomes_project 11 84334803 84340553 + MGP_CBAJ_P0030508 Coro6 protein_coding protein_coding MGP_CBAJ_T0030509.1 MGP_CBAJ_G0018469.1 mouse_genomes_project 11 84334803 84340553 + MGP_CBAJ_P0030509 Coro6 protein_coding protein_coding MGP_CBAJ_T0030510.1 MGP_CBAJ_G0018469.1 mouse_genomes_project 11 84334878 84340453 + MGP_CBAJ_P0030510 Coro6 protein_coding protein_coding MGP_CBAJ_T0030511.1 MGP_CBAJ_G0018469.1 mouse_genomes_project 11 84334878 84340453 + MGP_CBAJ_P0030511 Coro6 protein_coding protein_coding MGP_CBAJ_T0031826.1 MGP_CBAJ_G0018797.1 mouse_genomes_project 11 108791301 108803926 + Thra protein_coding processed_transcript MGP_CBAJ_T0031827.1 MGP_CBAJ_G0018797.1 mouse_genomes_project 11 108791464 108804185 + Thra protein_coding processed_transcript MGP_CBAJ_T0031828.1 MGP_CBAJ_G0018797.1 mouse_genomes_project 11 108791567 108803989 + Thra protein_coding processed_transcript MGP_CBAJ_T0031829.1 MGP_CBAJ_G0018797.1 mouse_genomes_project 11 108792474 108808991 + Thra protein_coding processed_transcript MGP_CBAJ_T0031830.1 MGP_CBAJ_G0018797.1 mouse_genomes_project 11 108792474 108821402 + MGP_CBAJ_P0031830 Thra protein_coding protein_coding MGP_CBAJ_T0031831.1 MGP_CBAJ_G0018797.1 mouse_genomes_project 11 108792536 108816878 + MGP_CBAJ_P0031831 Thra protein_coding protein_coding MGP_CBAJ_T0031832.1 MGP_CBAJ_G0018797.1 mouse_genomes_project 11 108792821 108808291 + MGP_CBAJ_P0031832 Thra protein_coding protein_coding MGP_CBAJ_T0031833.1 MGP_CBAJ_G0018797.1 mouse_genomes_project 11 108794896 108804324 + Thra protein_coding processed_transcript MGP_CBAJ_T0031834.1 MGP_CBAJ_G0018797.1 mouse_genomes_project 11 108804132 108820799 + MGP_CBAJ_P0031834 Thra protein_coding protein_coding MGP_CBAJ_T0028555.1 MGP_CBAJ_G0017978.1 mouse_genomes_project 11 53861199 53876578 - MGP_CBAJ_P0028555 Zfp354c protein_coding unknown_likely_coding MGP_CBAJ_T0028556.1 MGP_CBAJ_G0017978.1 mouse_genomes_project 11 53861205 53881202 - MGP_CBAJ_P0028556 Zfp354c protein_coding protein_coding MGP_CBAJ_T0028557.1 MGP_CBAJ_G0017978.1 mouse_genomes_project 11 53864683 53879970 - MGP_CBAJ_P0028557 Zfp354c protein_coding protein_coding MGP_CBAJ_T0028558.1 MGP_CBAJ_G0017978.1 mouse_genomes_project 11 53867312 53881198 - Zfp354c protein_coding processed_transcript MGP_CBAJ_T0028559.1 MGP_CBAJ_G0017978.1 mouse_genomes_project 11 53879787 53881236 - Zfp354c protein_coding processed_transcript MGP_CBAJ_T0006131.1 MGP_CBAJ_G0005113.1 mouse_genomes_project 11 39942128 39978823 - Gm12130 lincRNA lincRNA MGP_CBAJ_T0016923.1 MGP_CBAJ_G0014903.1 mouse_genomes_project 11 31249892 31255181 + Gm12100 processed_transcript processed_transcript MGP_CBAJ_T0012535.1 MGP_CBAJ_G0010647.1 mouse_genomes_project 11 88221914 88222328 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031122.1 MGP_CBAJ_G0018621.1 mouse_genomes_project 11 94992699 95059520 - MGP_CBAJ_P0031122 Ypel2 protein_coding protein_coding MGP_CBAJ_T0033370.1 MGP_CBAJ_G0019158.1 mouse_genomes_project 11 129506069 129515441 - MGP_CBAJ_P0033370 St6galnac1 protein_coding protein_coding MGP_CBAJ_T0028974.1 MGP_CBAJ_G0018112.1 mouse_genomes_project 11 63266386 63274254 + MGP_CBAJ_P0028974 Trim17 protein_coding protein_coding MGP_CBAJ_T0031928.1 MGP_CBAJ_G0018843.1 mouse_genomes_project 11 110012678 110021713 - MGP_CBAJ_P0031928 protein_coding protein_coding MGP_CBAJ_T0030518.1 MGP_CBAJ_G0018471.1 mouse_genomes_project 11 84371764 84393602 + MGP_CBAJ_P0030518 Git1 protein_coding protein_coding MGP_CBAJ_T0030519.1 MGP_CBAJ_G0018471.1 mouse_genomes_project 11 84371773 84393602 + MGP_CBAJ_P0030519 Git1 protein_coding protein_coding MGP_CBAJ_T0030520.1 MGP_CBAJ_G0018471.1 mouse_genomes_project 11 84379560 84388931 + Git1 protein_coding retained_intron MGP_CBAJ_T0030521.1 MGP_CBAJ_G0018471.1 mouse_genomes_project 11 84386803 84390901 + Git1 protein_coding retained_intron MGP_CBAJ_T0030522.1 MGP_CBAJ_G0018471.1 mouse_genomes_project 11 84388294 84390648 + Git1 protein_coding retained_intron MGP_CBAJ_T0030523.1 MGP_CBAJ_G0018471.1 mouse_genomes_project 11 84390951 84391855 + Git1 protein_coding retained_intron MGP_CBAJ_T0031921.1 MGP_CBAJ_G0018836.1 mouse_genomes_project 11 109848915 109849970 - MGP_CBAJ_P0031921 protein_coding protein_coding MGP_CBAJ_T0029461.1 MGP_CBAJ_G0018222.1 mouse_genomes_project 11 73296254 73298875 + Dhrs7c protein_coding processed_transcript MGP_CBAJ_T0029462.1 MGP_CBAJ_G0018222.1 mouse_genomes_project 11 73296338 73299243 + Dhrs7c protein_coding processed_transcript MGP_CBAJ_T0029463.1 MGP_CBAJ_G0018222.1 mouse_genomes_project 11 73296343 73299404 + Dhrs7c protein_coding processed_transcript MGP_CBAJ_T0029464.1 MGP_CBAJ_G0018222.1 mouse_genomes_project 11 73296344 73297134 + Dhrs7c protein_coding processed_transcript MGP_CBAJ_T0029465.1 MGP_CBAJ_G0018222.1 mouse_genomes_project 11 73296354 73315290 + MGP_CBAJ_P0029465 Dhrs7c protein_coding protein_coding MGP_CBAJ_T0032637.1 MGP_CBAJ_G0019006.1 mouse_genomes_project 11 116851313 117070677 + MGP_CBAJ_P0032637 Tanc2 protein_coding protein_coding MGP_CBAJ_T0032638.1 MGP_CBAJ_G0019006.1 mouse_genomes_project 11 116851318 117228504 + MGP_CBAJ_P0032638 Tanc2 protein_coding protein_coding MGP_CBAJ_T0032639.1 MGP_CBAJ_G0019006.1 mouse_genomes_project 11 116851481 117222929 + MGP_CBAJ_P0032639 Tanc2 protein_coding protein_coding MGP_CBAJ_T0032640.1 MGP_CBAJ_G0019006.1 mouse_genomes_project 11 116890804 116999647 + Tanc2 protein_coding processed_transcript MGP_CBAJ_T0032641.1 MGP_CBAJ_G0019006.1 mouse_genomes_project 11 116997633 116998923 + MGP_CBAJ_P0032641 Tanc2 protein_coding protein_coding MGP_CBAJ_T0032642.1 MGP_CBAJ_G0019006.1 mouse_genomes_project 11 117192037 117223328 + MGP_CBAJ_P0032642 Tanc2 protein_coding protein_coding MGP_CBAJ_T0032643.1 MGP_CBAJ_G0019006.1 mouse_genomes_project 11 117197471 117213359 + Tanc2 protein_coding processed_transcript MGP_CBAJ_T0003104.1 MGP_CBAJ_G0002884.1 mouse_genomes_project 11 61755108 61757664 - 4933426K07Rik antisense antisense MGP_CBAJ_T0031791.1 MGP_CBAJ_G0018789.1 mouse_genomes_project 11 108513416 108520822 + MGP_CBAJ_P0031791 Zpbp2 protein_coding protein_coding MGP_CBAJ_T0031792.1 MGP_CBAJ_G0018789.1 mouse_genomes_project 11 108513449 108520822 + MGP_CBAJ_P0031792 Zpbp2 protein_coding protein_coding MGP_CBAJ_T0031793.1 MGP_CBAJ_G0018789.1 mouse_genomes_project 11 108513469 108520813 + MGP_CBAJ_P0031793 Zpbp2 protein_coding protein_coding MGP_CBAJ_T0031794.1 MGP_CBAJ_G0018789.1 mouse_genomes_project 11 108513471 108520813 + MGP_CBAJ_P0031794 Zpbp2 protein_coding protein_coding MGP_CBAJ_T0031795.1 MGP_CBAJ_G0018789.1 mouse_genomes_project 11 108513497 108520690 + MGP_CBAJ_P0031795 Zpbp2 protein_coding protein_coding MGP_CBAJ_T0031796.1 MGP_CBAJ_G0018789.1 mouse_genomes_project 11 108517599 108520542 + Zpbp2 protein_coding processed_transcript MGP_CBAJ_T0031087.1 MGP_CBAJ_G0018614.1 mouse_genomes_project 11 94522683 94539244 + MGP_CBAJ_P0031087 Rnft1 protein_coding protein_coding MGP_CBAJ_T0031088.1 MGP_CBAJ_G0018614.1 mouse_genomes_project 11 94522711 94530424 + Rnft1 protein_coding processed_transcript MGP_CBAJ_T0031089.1 MGP_CBAJ_G0018614.1 mouse_genomes_project 11 94522756 94524132 + Rnft1 protein_coding processed_transcript MGP_CBAJ_T0012365.1 MGP_CBAJ_G0010477.1 mouse_genomes_project 11 20363603 20363897 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0033125.1 MGP_CBAJ_G0019116.1 mouse_genomes_project 11 128174711 128178826 + MGP_CBAJ_P0033125 Mrps7 protein_coding protein_coding MGP_CBAJ_T0033126.1 MGP_CBAJ_G0019116.1 mouse_genomes_project 11 128175653 128177788 + Mrps7 protein_coding processed_transcript MGP_CBAJ_T0003164.1 MGP_CBAJ_G0002934.1 mouse_genomes_project 11 86886771 86891519 - Rab11fip4os2 antisense antisense MGP_CBAJ_T0003165.1 MGP_CBAJ_G0002934.1 mouse_genomes_project 11 86890302 86891564 - Rab11fip4os2 antisense antisense MGP_CBAJ_T0032991.1 MGP_CBAJ_G0019084.1 mouse_genomes_project 11 127324796 127339661 + MGP_CBAJ_P0032991 Cd300a protein_coding protein_coding MGP_CBAJ_T0032992.1 MGP_CBAJ_G0019084.1 mouse_genomes_project 11 127324796 127339661 + MGP_CBAJ_P0032992 Cd300a protein_coding protein_coding MGP_CBAJ_T0032993.1 MGP_CBAJ_G0019084.1 mouse_genomes_project 11 127325050 127328347 + Cd300a protein_coding processed_transcript MGP_CBAJ_T0028690.1 MGP_CBAJ_G0018015.1 mouse_genomes_project 11 56881932 56968083 + MGP_CBAJ_P0028690 Aff4 protein_coding protein_coding MGP_CBAJ_T0028691.1 MGP_CBAJ_G0018015.1 mouse_genomes_project 11 56904245 56908630 + MGP_CBAJ_P0028691 Aff4 protein_coding protein_coding MGP_CBAJ_T0028692.1 MGP_CBAJ_G0018015.1 mouse_genomes_project 11 56904802 56912048 + Aff4 protein_coding retained_intron MGP_CBAJ_T0028693.1 MGP_CBAJ_G0018015.1 mouse_genomes_project 11 56908689 56911820 + Aff4 protein_coding retained_intron MGP_CBAJ_T0028694.1 MGP_CBAJ_G0018015.1 mouse_genomes_project 11 56909075 56938307 + MGP_CBAJ_P0028694 Aff4 protein_coding protein_coding MGP_CBAJ_T0028695.1 MGP_CBAJ_G0018015.1 mouse_genomes_project 11 56909083 56945977 + Aff4 protein_coding processed_transcript MGP_CBAJ_T0028696.1 MGP_CBAJ_G0018015.1 mouse_genomes_project 11 56950898 56955795 + Aff4 protein_coding retained_intron MGP_CBAJ_T0028697.1 MGP_CBAJ_G0018015.1 mouse_genomes_project 11 56956946 56962086 + Aff4 protein_coding retained_intron MGP_CBAJ_T0031737.1 MGP_CBAJ_G0018776.1 mouse_genomes_project 11 107978575 108060590 - MGP_CBAJ_P0031737 Fbxl20 protein_coding protein_coding MGP_CBAJ_T0031738.1 MGP_CBAJ_G0018776.1 mouse_genomes_project 11 107987014 108060584 - Fbxl20 protein_coding retained_intron MGP_CBAJ_T0031739.1 MGP_CBAJ_G0018776.1 mouse_genomes_project 11 107997758 108003135 - MGP_CBAJ_P0031739 Fbxl20 protein_coding protein_coding MGP_CBAJ_T0031740.1 MGP_CBAJ_G0018776.1 mouse_genomes_project 11 108001493 108061380 - MGP_CBAJ_P0031740 Fbxl20 protein_coding protein_coding MGP_CBAJ_T0031741.1 MGP_CBAJ_G0018776.1 mouse_genomes_project 11 108004810 108040194 - Fbxl20 protein_coding processed_transcript MGP_CBAJ_T0031742.1 MGP_CBAJ_G0018776.1 mouse_genomes_project 11 108012594 108040194 - MGP_CBAJ_P0031742 Fbxl20 protein_coding protein_coding MGP_CBAJ_T0031743.1 MGP_CBAJ_G0018776.1 mouse_genomes_project 11 108039213 108040178 - Fbxl20 protein_coding processed_transcript MGP_CBAJ_T0028419.1 MGP_CBAJ_G0017942.1 mouse_genomes_project 11 51936685 51937666 - MGP_CBAJ_P0028419 Olfr1396 protein_coding protein_coding MGP_CBAJ_T0028783.1 MGP_CBAJ_G0018038.1 mouse_genomes_project 11 57990304 57992722 - MGP_CBAJ_P0028783 Csf2 protein_coding protein_coding MGP_CBAJ_T0003229.1 MGP_CBAJ_G0002982.1 mouse_genomes_project 11 112543279 112548249 + Gm11551 antisense antisense MGP_CBAJ_T0016885.1 MGP_CBAJ_G0014886.1 mouse_genomes_project 11 557892 562599 + processed_transcript processed_transcript MGP_CBAJ_T0016886.1 MGP_CBAJ_G0014886.1 mouse_genomes_project 11 557964 562463 + processed_transcript processed_transcript MGP_CBAJ_T0016887.1 MGP_CBAJ_G0014886.1 mouse_genomes_project 11 557999 563838 + processed_transcript processed_transcript MGP_CBAJ_T0016888.1 MGP_CBAJ_G0014886.1 mouse_genomes_project 11 558007 562516 + processed_transcript processed_transcript MGP_CBAJ_T0033660.1 MGP_CBAJ_G0019216.1 mouse_genomes_project 11 133630631 133637266 + MGP_CBAJ_P0033660 Fscn2 protein_coding protein_coding MGP_CBAJ_T0033661.1 MGP_CBAJ_G0019216.1 mouse_genomes_project 11 133635639 133637046 + Fscn2 protein_coding processed_transcript MGP_CBAJ_T0033662.1 MGP_CBAJ_G0019216.1 mouse_genomes_project 11 133635810 133636918 + Fscn2 protein_coding processed_transcript MGP_CBAJ_T0012545.1 MGP_CBAJ_G0010657.1 mouse_genomes_project 11 93939777 93940256 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0029126.1 MGP_CBAJ_G0018149.1 mouse_genomes_project 11 65270409 65271014 - Flii protein_coding retained_intron MGP_CBAJ_T0029127.1 MGP_CBAJ_G0018149.1 mouse_genomes_project 11 65270429 65285961 - MGP_CBAJ_P0029127 Flii protein_coding protein_coding MGP_CBAJ_T0029128.1 MGP_CBAJ_G0018149.1 mouse_genomes_project 11 65277995 65278910 - Flii protein_coding retained_intron MGP_CBAJ_T0029129.1 MGP_CBAJ_G0018149.1 mouse_genomes_project 11 65283062 65285921 - Flii protein_coding retained_intron MGP_CBAJ_T0031963.1 MGP_CBAJ_G0018869.1 mouse_genomes_project 11 110697453 110704897 + MGP_CBAJ_P0031963 Eif1 protein_coding protein_coding MGP_CBAJ_T0031964.1 MGP_CBAJ_G0018869.1 mouse_genomes_project 11 110697777 110698558 + MGP_CBAJ_P0031964 Eif1 protein_coding protein_coding MGP_CBAJ_T0031965.1 MGP_CBAJ_G0018869.1 mouse_genomes_project 11 110698086 110698918 + Eif1 protein_coding processed_transcript MGP_CBAJ_T0030349.1 MGP_CBAJ_G0018435.1 mouse_genomes_project 11 82023016 82036515 - MGP_CBAJ_P0030349 Wdr81 protein_coding protein_coding MGP_CBAJ_T0030350.1 MGP_CBAJ_G0018435.1 mouse_genomes_project 11 82023020 82033159 - MGP_CBAJ_P0030350 Wdr81 protein_coding protein_coding MGP_CBAJ_T0030351.1 MGP_CBAJ_G0018435.1 mouse_genomes_project 11 82030237 82031851 - Wdr81 protein_coding processed_transcript MGP_CBAJ_T0016985.1 MGP_CBAJ_G0014938.1 mouse_genomes_project 11 106558297 106611201 + D030028A08Rik processed_transcript processed_transcript MGP_CBAJ_T0016986.1 MGP_CBAJ_G0014938.1 mouse_genomes_project 11 106590161 106622727 + D030028A08Rik processed_transcript processed_transcript MGP_CBAJ_T0016987.1 MGP_CBAJ_G0014938.1 mouse_genomes_project 11 106590185 106617767 + D030028A08Rik processed_transcript processed_transcript MGP_CBAJ_T0016988.1 MGP_CBAJ_G0014938.1 mouse_genomes_project 11 106590308 106621571 + D030028A08Rik processed_transcript processed_transcript MGP_CBAJ_T0027499.1 MGP_CBAJ_G0017716.1 mouse_genomes_project 11 2021941 2061315 + MGP_CBAJ_P0027499 Zmat5 protein_coding unknown_likely_coding MGP_CBAJ_T0027500.1 MGP_CBAJ_G0017716.1 mouse_genomes_project 11 2021965 2061249 + Zmat5 protein_coding processed_transcript MGP_CBAJ_T0027501.1 MGP_CBAJ_G0017716.1 mouse_genomes_project 11 2052473 2056412 + Zmat5 protein_coding processed_transcript MGP_CBAJ_T0006082.1 MGP_CBAJ_G0005071.1 mouse_genomes_project 11 1548639 1550119 + Gm11958 lincRNA lincRNA MGP_CBAJ_T0098707.1 MGP_CBAJ_G0036962.1 mouse_genomes_project 11 90133316 90133423 - Gm24612 snRNA snRNA MGP_CBAJ_T0098714.1 MGP_CBAJ_G0036969.1 mouse_genomes_project 11 95575068 95575232 + Rnu1a1 snRNA snRNA MGP_CBAJ_T0030661.1 MGP_CBAJ_G0018498.1 mouse_genomes_project 11 85371917 85376727 + MGP_CBAJ_P0030661 Aldoc protein_coding protein_coding MGP_CBAJ_T0030662.1 MGP_CBAJ_G0018498.1 mouse_genomes_project 11 85372117 85373643 + Aldoc protein_coding retained_intron MGP_CBAJ_T0030663.1 MGP_CBAJ_G0018498.1 mouse_genomes_project 11 85373145 85375706 + MGP_CBAJ_P0030663 Aldoc protein_coding protein_coding MGP_CBAJ_T0030664.1 MGP_CBAJ_G0018498.1 mouse_genomes_project 11 85373271 85375064 + Aldoc protein_coding processed_transcript MGP_CBAJ_T0030665.1 MGP_CBAJ_G0018498.1 mouse_genomes_project 11 85374010 85374507 + Aldoc protein_coding processed_transcript MGP_CBAJ_T0030666.1 MGP_CBAJ_G0018498.1 mouse_genomes_project 11 85374274 85375654 + Aldoc protein_coding processed_transcript MGP_CBAJ_T0098185.1 MGP_CBAJ_G0036458.1 mouse_genomes_project 11 129886109 129886302 + Gm26083 scaRNA scaRNA MGP_CBAJ_T0027651.1 MGP_CBAJ_G0017749.1 mouse_genomes_project 11 3896135 3970239 + MGP_CBAJ_P0027651 Ogdh protein_coding unknown_likely_coding MGP_CBAJ_T0027652.1 MGP_CBAJ_G0017749.1 mouse_genomes_project 11 3896148 3971207 + MGP_CBAJ_P0027652 Ogdh protein_coding protein_coding MGP_CBAJ_T0027653.1 MGP_CBAJ_G0017749.1 mouse_genomes_project 11 3896156 3902300 + Ogdh protein_coding retained_intron MGP_CBAJ_T0027654.1 MGP_CBAJ_G0017749.1 mouse_genomes_project 11 3896181 3971143 + MGP_CBAJ_P0027654 Ogdh protein_coding protein_coding MGP_CBAJ_T0027655.1 MGP_CBAJ_G0017749.1 mouse_genomes_project 11 3896183 3971157 + MGP_CBAJ_P0027655 Ogdh protein_coding protein_coding MGP_CBAJ_T0027656.1 MGP_CBAJ_G0017749.1 mouse_genomes_project 11 3896500 3923982 + MGP_CBAJ_P0027656 Ogdh protein_coding protein_coding MGP_CBAJ_T0027657.1 MGP_CBAJ_G0017749.1 mouse_genomes_project 11 3896687 3923866 + MGP_CBAJ_P0027657 Ogdh protein_coding protein_coding MGP_CBAJ_T0027658.1 MGP_CBAJ_G0017749.1 mouse_genomes_project 11 3897120 3971157 + MGP_CBAJ_P0027658 Ogdh protein_coding protein_coding MGP_CBAJ_T0012418.1 MGP_CBAJ_G0010530.1 mouse_genomes_project 11 42163949 42164469 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0031270.1 MGP_CBAJ_G0018662.1 mouse_genomes_project 11 98662431 98668592 + MGP_CBAJ_P0031270 Tmem100 protein_coding protein_coding MGP_CBAJ_T0003062.1 MGP_CBAJ_G0002846.1 mouse_genomes_project 11 23816895 23832212 - 4930538E20Rik antisense antisense MGP_CBAJ_T0003063.1 MGP_CBAJ_G0002846.1 mouse_genomes_project 11 23823245 23832169 - 4930538E20Rik antisense antisense MGP_CBAJ_T0032984.1 MGP_CBAJ_G0019083.1 mouse_genomes_project 11 127269944 127287923 + MGP_CBAJ_P0032984 Gprc5c protein_coding protein_coding MGP_CBAJ_T0032985.1 MGP_CBAJ_G0019083.1 mouse_genomes_project 11 127270332 127293359 + MGP_CBAJ_P0032985 Gprc5c protein_coding protein_coding MGP_CBAJ_T0032986.1 MGP_CBAJ_G0019083.1 mouse_genomes_project 11 127270591 127294617 + MGP_CBAJ_P0032986 Gprc5c protein_coding protein_coding MGP_CBAJ_T0032987.1 MGP_CBAJ_G0019083.1 mouse_genomes_project 11 127270642 127293360 + MGP_CBAJ_P0032987 Gprc5c protein_coding protein_coding MGP_CBAJ_T0032988.1 MGP_CBAJ_G0019083.1 mouse_genomes_project 11 127270672 127288537 + MGP_CBAJ_P0032988 Gprc5c protein_coding protein_coding MGP_CBAJ_T0032989.1 MGP_CBAJ_G0019083.1 mouse_genomes_project 11 127271111 127288087 + MGP_CBAJ_P0032989 Gprc5c protein_coding protein_coding MGP_CBAJ_T0032990.1 MGP_CBAJ_G0019083.1 mouse_genomes_project 11 127288681 127294871 + MGP_CBAJ_P0032990 Gprc5c protein_coding protein_coding MGP_CBAJ_T0012389.1 MGP_CBAJ_G0010501.1 mouse_genomes_project 11 28046733 28049816 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0031564.1 MGP_CBAJ_G0018737.1 mouse_genomes_project 11 106374895 106384806 - MGP_CBAJ_P0031564 Snx11 protein_coding protein_coding MGP_CBAJ_T0031565.1 MGP_CBAJ_G0018737.1 mouse_genomes_project 11 106375217 106384834 - MGP_CBAJ_P0031565 Snx11 protein_coding protein_coding MGP_CBAJ_T0031566.1 MGP_CBAJ_G0018737.1 mouse_genomes_project 11 106377230 106384767 - MGP_CBAJ_P0031566 Snx11 protein_coding protein_coding MGP_CBAJ_T0031567.1 MGP_CBAJ_G0018737.1 mouse_genomes_project 11 106377437 106378390 - Snx11 protein_coding processed_transcript MGP_CBAJ_T0031568.1 MGP_CBAJ_G0018737.1 mouse_genomes_project 11 106379814 106381910 - Snx11 protein_coding processed_transcript MGP_CBAJ_T0031569.1 MGP_CBAJ_G0018737.1 mouse_genomes_project 11 106383568 106384795 - Snx11 protein_coding processed_transcript MGP_CBAJ_T0027816.1 MGP_CBAJ_G0017788.1 mouse_genomes_project 11 16094800 16100132 + C1d protein_coding processed_transcript MGP_CBAJ_T0027817.1 MGP_CBAJ_G0017788.1 mouse_genomes_project 11 16094813 16101516 + C1d protein_coding processed_transcript MGP_CBAJ_T0027818.1 MGP_CBAJ_G0017788.1 mouse_genomes_project 11 16094815 16106399 + MGP_CBAJ_P0027818 C1d protein_coding protein_coding MGP_CBAJ_T0027819.1 MGP_CBAJ_G0017788.1 mouse_genomes_project 11 16094909 16103846 + MGP_CBAJ_P0027819 C1d protein_coding protein_coding MGP_CBAJ_T0027820.1 MGP_CBAJ_G0017788.1 mouse_genomes_project 11 16100842 16103782 + C1d protein_coding processed_transcript MGP_CBAJ_T0011193.1 MGP_CBAJ_G0009331.1 mouse_genomes_project 11 129947281 129947609 + Gm22667 misc_RNA misc_RNA MGP_CBAJ_T0028673.1 MGP_CBAJ_G0018009.1 mouse_genomes_project 11 55633926 55664866 - MGP_CBAJ_P0028673 Tcf7 protein_coding protein_coding MGP_CBAJ_T0028674.1 MGP_CBAJ_G0018009.1 mouse_genomes_project 11 55634791 55665309 - MGP_CBAJ_P0028674 Tcf7 protein_coding protein_coding MGP_CBAJ_T0031494.1 MGP_CBAJ_G0018714.1 mouse_genomes_project 11 105153777 105156904 + MGP_CBAJ_P0031494 B130006D01Rik protein_coding protein_coding MGP_CBAJ_T0030848.1 MGP_CBAJ_G0018552.1 mouse_genomes_project 11 89923843 89987114 + MGP_CBAJ_P0030848 Tmem132e protein_coding protein_coding MGP_CBAJ_T0030849.1 MGP_CBAJ_G0018552.1 mouse_genomes_project 11 89923843 89987119 + MGP_CBAJ_P0030849 Tmem132e protein_coding protein_coding MGP_CBAJ_T0030850.1 MGP_CBAJ_G0018552.1 mouse_genomes_project 11 89924066 89975510 + Tmem132e protein_coding processed_transcript MGP_CBAJ_T0030851.1 MGP_CBAJ_G0018552.1 mouse_genomes_project 11 89979043 89983686 + Tmem132e protein_coding retained_intron MGP_CBAJ_T0028109.1 MGP_CBAJ_G0017854.1 mouse_genomes_project 11 32880878 32897849 - MGP_CBAJ_P0028109 Il9r protein_coding protein_coding MGP_CBAJ_T0028110.1 MGP_CBAJ_G0017854.1 mouse_genomes_project 11 32882333 32897906 - MGP_CBAJ_P0028110 Il9r protein_coding nonsense_mediated_decay MGP_CBAJ_T0028111.1 MGP_CBAJ_G0017854.1 mouse_genomes_project 11 32883619 32897863 - MGP_CBAJ_P0028111 Il9r protein_coding protein_coding MGP_CBAJ_T0028112.1 MGP_CBAJ_G0017854.1 mouse_genomes_project 11 32883835 32897849 - MGP_CBAJ_P0028112 Il9r protein_coding protein_coding MGP_CBAJ_T0028113.1 MGP_CBAJ_G0017854.1 mouse_genomes_project 11 32888060 32897906 - Il9r protein_coding retained_intron MGP_CBAJ_T0003067.1 MGP_CBAJ_G0002850.1 mouse_genomes_project 11 34662587 34664602 + Gm12119 antisense antisense MGP_CBAJ_T0012358.1 MGP_CBAJ_G0010470.1 mouse_genomes_project 11 18713529 18714159 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016991.1 MGP_CBAJ_G0014941.1 mouse_genomes_project 11 107388026 107416120 + 2410003L11Rik processed_transcript processed_transcript MGP_CBAJ_T0016992.1 MGP_CBAJ_G0014941.1 mouse_genomes_project 11 107409335 107413324 + 2410003L11Rik processed_transcript processed_transcript MGP_CBAJ_T0029856.1 MGP_CBAJ_G0018306.1 mouse_genomes_project 11 75999503 76012155 + MGP_CBAJ_P0029856 Asgr2 protein_coding protein_coding MGP_CBAJ_T0029857.1 MGP_CBAJ_G0018306.1 mouse_genomes_project 11 75999825 76012625 + MGP_CBAJ_P0029857 Asgr2 protein_coding protein_coding MGP_CBAJ_T0029858.1 MGP_CBAJ_G0018306.1 mouse_genomes_project 11 76004447 76012600 + Asgr2 protein_coding retained_intron MGP_CBAJ_T0012373.1 MGP_CBAJ_G0010485.1 mouse_genomes_project 11 21257281 21258225 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0030529.1 MGP_CBAJ_G0018473.1 mouse_genomes_project 11 84400867 84408070 + MGP_CBAJ_P0030529 Abhd15 protein_coding protein_coding MGP_CBAJ_T0030530.1 MGP_CBAJ_G0018473.1 mouse_genomes_project 11 84401730 84426644 + MGP_CBAJ_P0030530 Abhd15 protein_coding protein_coding MGP_CBAJ_T0030532.1 MGP_CBAJ_G0018473.1 mouse_genomes_project 11 84406642 84426642 + MGP_CBAJ_P0030532 Abhd15 protein_coding protein_coding MGP_CBAJ_T0012377.1 MGP_CBAJ_G0010489.1 mouse_genomes_project 11 22252562 22253989 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099923.1 MGP_CBAJ_G0038178.1 mouse_genomes_project 11 59383191 59383331 + Gm22884 snoRNA snoRNA MGP_CBAJ_T0030256.1 MGP_CBAJ_G0018410.1 mouse_genomes_project 11 80552555 80553567 + MGP_CBAJ_P0030256 Olfr402 protein_coding protein_coding MGP_CBAJ_T0032374.1 MGP_CBAJ_G0018953.1 mouse_genomes_project 11 113142163 113150515 + MGP_CBAJ_P0032374 Rundc3a protein_coding protein_coding MGP_CBAJ_T0032375.1 MGP_CBAJ_G0018953.1 mouse_genomes_project 11 113142163 113150515 + MGP_CBAJ_P0032375 Rundc3a protein_coding protein_coding MGP_CBAJ_T0032376.1 MGP_CBAJ_G0018953.1 mouse_genomes_project 11 113142163 113150515 + MGP_CBAJ_P0032376 Rundc3a protein_coding protein_coding MGP_CBAJ_T0032377.1 MGP_CBAJ_G0018953.1 mouse_genomes_project 11 113142163 113151316 + MGP_CBAJ_P0032377 Rundc3a protein_coding protein_coding MGP_CBAJ_T0032378.1 MGP_CBAJ_G0018953.1 mouse_genomes_project 11 113146624 113151316 + Rundc3a protein_coding retained_intron MGP_CBAJ_T0032379.1 MGP_CBAJ_G0018953.1 mouse_genomes_project 11 113146879 113148540 + Rundc3a protein_coding processed_transcript MGP_CBAJ_T0032380.1 MGP_CBAJ_G0018953.1 mouse_genomes_project 11 113147927 113150990 + Rundc3a protein_coding processed_transcript MGP_CBAJ_T0032381.1 MGP_CBAJ_G0018953.1 mouse_genomes_project 11 113148324 113150987 + Rundc3a protein_coding processed_transcript MGP_CBAJ_T0032382.1 MGP_CBAJ_G0018953.1 mouse_genomes_project 11 113148516 113150913 + Rundc3a protein_coding processed_transcript MGP_CBAJ_T0032383.1 MGP_CBAJ_G0018953.1 mouse_genomes_project 11 113148618 113149546 + Rundc3a protein_coding processed_transcript MGP_CBAJ_T0031874.1 MGP_CBAJ_G0018807.1 mouse_genomes_project 11 109159967 109175165 + MGP_CBAJ_P0031874 Igfbp4 protein_coding protein_coding MGP_CBAJ_T0031875.1 MGP_CBAJ_G0018807.1 mouse_genomes_project 11 109160483 109172502 + MGP_CBAJ_P0031875 Igfbp4 protein_coding protein_coding MGP_CBAJ_T0031876.1 MGP_CBAJ_G0018807.1 mouse_genomes_project 11 109160909 109169161 + Igfbp4 protein_coding processed_transcript MGP_CBAJ_T0031877.1 MGP_CBAJ_G0018807.1 mouse_genomes_project 11 109164397 109172721 + Igfbp4 protein_coding processed_transcript MGP_CBAJ_T0031878.1 MGP_CBAJ_G0018807.1 mouse_genomes_project 11 109165566 109172616 + Igfbp4 protein_coding processed_transcript MGP_CBAJ_T0031879.1 MGP_CBAJ_G0018807.1 mouse_genomes_project 11 109168111 109172613 + MGP_CBAJ_P0031879 Igfbp4 protein_coding protein_coding MGP_CBAJ_T0006266.1 MGP_CBAJ_G0005216.1 mouse_genomes_project 11 125421192 125427745 - 4732490B19Rik lincRNA lincRNA MGP_CBAJ_T0033449.1 MGP_CBAJ_G0019174.1 mouse_genomes_project 11 130777936 130788855 - MGP_CBAJ_P0033449 Tk1 protein_coding protein_coding MGP_CBAJ_T0033450.1 MGP_CBAJ_G0019174.1 mouse_genomes_project 11 130778034 130779418 - Tk1 protein_coding retained_intron MGP_CBAJ_T0033451.1 MGP_CBAJ_G0019174.1 mouse_genomes_project 11 130778315 130780188 - Tk1 protein_coding retained_intron MGP_CBAJ_T0033452.1 MGP_CBAJ_G0019174.1 mouse_genomes_project 11 130784403 130788600 - Tk1 protein_coding retained_intron MGP_CBAJ_T0033453.1 MGP_CBAJ_G0019174.1 mouse_genomes_project 11 130784481 130788630 - Tk1 protein_coding retained_intron MGP_CBAJ_T0033454.1 MGP_CBAJ_G0019174.1 mouse_genomes_project 11 130785221 130788610 - Tk1 protein_coding retained_intron MGP_CBAJ_T0033455.1 MGP_CBAJ_G0019174.1 mouse_genomes_project 11 130787597 130788580 - Tk1 protein_coding retained_intron MGP_CBAJ_T0012461.1 MGP_CBAJ_G0010573.1 mouse_genomes_project 11 58978530 58978773 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099908.1 MGP_CBAJ_G0038163.1 mouse_genomes_project 11 20529794 20529933 - Gm23582 snoRNA snoRNA MGP_CBAJ_T0099904.1 MGP_CBAJ_G0038159.1 mouse_genomes_project 11 11008603 11008744 + Gm22156 snoRNA snoRNA MGP_CBAJ_T0028968.1 MGP_CBAJ_G0018106.1 mouse_genomes_project 11 63226587 63227680 + MGP_CBAJ_P0028968 protein_coding protein_coding MGP_CBAJ_T0003157.1 MGP_CBAJ_G0002927.1 mouse_genomes_project 11 83822939 83823899 - Gm12343 antisense antisense MGP_CBAJ_T0029944.1 MGP_CBAJ_G0018328.1 mouse_genomes_project 11 76540923 76610141 + MGP_CBAJ_P0029944 Mink1 protein_coding protein_coding MGP_CBAJ_T0029945.1 MGP_CBAJ_G0018328.1 mouse_genomes_project 11 76540932 76602203 + MGP_CBAJ_P0029945 Mink1 protein_coding protein_coding MGP_CBAJ_T0029946.1 MGP_CBAJ_G0018328.1 mouse_genomes_project 11 76540940 76610137 + MGP_CBAJ_P0029946 Mink1 protein_coding protein_coding MGP_CBAJ_T0029947.1 MGP_CBAJ_G0018328.1 mouse_genomes_project 11 76541059 76610142 + MGP_CBAJ_P0029947 Mink1 protein_coding protein_coding MGP_CBAJ_T0029948.1 MGP_CBAJ_G0018328.1 mouse_genomes_project 11 76541112 76601789 + MGP_CBAJ_P0029948 Mink1 protein_coding protein_coding MGP_CBAJ_T0029949.1 MGP_CBAJ_G0018328.1 mouse_genomes_project 11 76581794 76587841 + Mink1 protein_coding processed_transcript MGP_CBAJ_T0029950.1 MGP_CBAJ_G0018328.1 mouse_genomes_project 11 76584799 76610142 + MGP_CBAJ_P0029950 Mink1 protein_coding protein_coding MGP_CBAJ_T0029951.1 MGP_CBAJ_G0018328.1 mouse_genomes_project 11 76587009 76592013 + MGP_CBAJ_P0029951 Mink1 protein_coding protein_coding MGP_CBAJ_T0029952.1 MGP_CBAJ_G0018328.1 mouse_genomes_project 11 76587032 76591668 + MGP_CBAJ_P0029952 Mink1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029953.1 MGP_CBAJ_G0018328.1 mouse_genomes_project 11 76591289 76592362 + Mink1 protein_coding retained_intron MGP_CBAJ_T0029954.1 MGP_CBAJ_G0018328.1 mouse_genomes_project 11 76592400 76593417 + Mink1 protein_coding retained_intron MGP_CBAJ_T0029955.1 MGP_CBAJ_G0018328.1 mouse_genomes_project 11 76594326 76595338 + Mink1 protein_coding retained_intron MGP_CBAJ_T0017027.1 MGP_CBAJ_G0014958.1 mouse_genomes_project 11 126544298 126545242 + 1700092K14Rik processed_transcript processed_transcript MGP_CBAJ_T0030006.1 MGP_CBAJ_G0018338.1 mouse_genomes_project 11 76695778 76711106 - MGP_CBAJ_P0030006 Inca1 protein_coding protein_coding MGP_CBAJ_T0030007.1 MGP_CBAJ_G0018338.1 mouse_genomes_project 11 76695778 76711106 - MGP_CBAJ_P0030007 Inca1 protein_coding protein_coding MGP_CBAJ_T0030008.1 MGP_CBAJ_G0018338.1 mouse_genomes_project 11 76695778 76711106 - MGP_CBAJ_P0030008 Inca1 protein_coding protein_coding MGP_CBAJ_T0030009.1 MGP_CBAJ_G0018338.1 mouse_genomes_project 11 76695778 76711106 - MGP_CBAJ_P0030009 Inca1 protein_coding protein_coding MGP_CBAJ_T0030010.1 MGP_CBAJ_G0018338.1 mouse_genomes_project 11 76695786 76711060 - MGP_CBAJ_P0030010 Inca1 protein_coding protein_coding MGP_CBAJ_T0031922.1 MGP_CBAJ_G0018837.1 mouse_genomes_project 11 109859114 109860098 - MGP_CBAJ_P0031922 Krtap4-7 protein_coding protein_coding MGP_CBAJ_T0031469.1 MGP_CBAJ_G0018707.1 mouse_genomes_project 11 104702306 104752525 + MGP_CBAJ_P0031469 Fam117a protein_coding protein_coding MGP_CBAJ_T0031470.1 MGP_CBAJ_G0018707.1 mouse_genomes_project 11 104702308 104745852 + Fam117a protein_coding processed_transcript MGP_CBAJ_T0031471.1 MGP_CBAJ_G0018707.1 mouse_genomes_project 11 104705220 104746281 + Fam117a protein_coding processed_transcript MGP_CBAJ_T0031472.1 MGP_CBAJ_G0018707.1 mouse_genomes_project 11 104705222 104732361 + Fam117a protein_coding processed_transcript MGP_CBAJ_T0031473.1 MGP_CBAJ_G0018707.1 mouse_genomes_project 11 104705251 104745856 + Fam117a protein_coding processed_transcript MGP_CBAJ_T0031474.1 MGP_CBAJ_G0018707.1 mouse_genomes_project 11 104746149 104748258 + Fam117a protein_coding processed_transcript MGP_CBAJ_T0031266.1 MGP_CBAJ_G0018660.1 mouse_genomes_project 11 97978814 98126452 - MGP_CBAJ_P0031266 protein_coding unknown_likely_coding MGP_CBAJ_T0031267.1 MGP_CBAJ_G0018660.1 mouse_genomes_project 11 98008422 98244816 - MGP_CBAJ_P0031267 protein_coding protein_coding MGP_CBAJ_T0031268.1 MGP_CBAJ_G0018660.1 mouse_genomes_project 11 98008521 98138387 - MGP_CBAJ_P0031268 protein_coding protein_coding MGP_CBAJ_T0098269.1 MGP_CBAJ_G0036539.1 mouse_genomes_project 11 131891766 131892730 - Gm11749 sense_intronic sense_intronic MGP_CBAJ_T0027670.1 MGP_CBAJ_G0017753.1 mouse_genomes_project 11 4111476 4119589 - MGP_CBAJ_P0027670 Purb protein_coding protein_coding MGP_CBAJ_T0003193.1 MGP_CBAJ_G0002954.1 mouse_genomes_project 11 104497602 104511607 + Dlx4os antisense antisense MGP_CBAJ_T0031458.1 MGP_CBAJ_G0018706.1 mouse_genomes_project 11 104631335 104674692 - MGP_CBAJ_P0031458 Kat7 protein_coding protein_coding MGP_CBAJ_T0031459.1 MGP_CBAJ_G0018706.1 mouse_genomes_project 11 104631335 104674093 - MGP_CBAJ_P0031459 Kat7 protein_coding protein_coding MGP_CBAJ_T0031460.1 MGP_CBAJ_G0018706.1 mouse_genomes_project 11 104631335 104674737 - MGP_CBAJ_P0031460 Kat7 protein_coding protein_coding MGP_CBAJ_T0031461.1 MGP_CBAJ_G0018706.1 mouse_genomes_project 11 104631335 104674737 - MGP_CBAJ_P0031461 Kat7 protein_coding protein_coding MGP_CBAJ_T0031462.1 MGP_CBAJ_G0018706.1 mouse_genomes_project 11 104631335 104674093 - MGP_CBAJ_P0031462 Kat7 protein_coding protein_coding MGP_CBAJ_T0031463.1 MGP_CBAJ_G0018706.1 mouse_genomes_project 11 104632400 104638983 - MGP_CBAJ_P0031463 Kat7 protein_coding protein_coding MGP_CBAJ_T0031464.1 MGP_CBAJ_G0018706.1 mouse_genomes_project 11 104638990 104674680 - Kat7 protein_coding processed_transcript MGP_CBAJ_T0031465.1 MGP_CBAJ_G0018706.1 mouse_genomes_project 11 104641244 104651169 - Kat7 protein_coding processed_transcript MGP_CBAJ_T0031466.1 MGP_CBAJ_G0018706.1 mouse_genomes_project 11 104666006 104674699 - Kat7 protein_coding processed_transcript MGP_CBAJ_T0031467.1 MGP_CBAJ_G0018706.1 mouse_genomes_project 11 104667647 104674004 - Kat7 protein_coding processed_transcript MGP_CBAJ_T0031468.1 MGP_CBAJ_G0018706.1 mouse_genomes_project 11 104670613 104674060 - Kat7 protein_coding processed_transcript MGP_CBAJ_T0032548.1 MGP_CBAJ_G0018986.1 mouse_genomes_project 11 114620221 114621232 + MGP_CBAJ_P0032548 Rprml protein_coding protein_coding MGP_CBAJ_T0009644.1 MGP_CBAJ_G0007782.1 mouse_genomes_project 11 127965036 127965136 - Mir3968 miRNA miRNA MGP_CBAJ_T0031942.1 MGP_CBAJ_G0018857.1 mouse_genomes_project 11 110386649 110391900 - MGP_CBAJ_P0031942 protein_coding protein_coding MGP_CBAJ_T0098180.1 MGP_CBAJ_G0036453.1 mouse_genomes_project 11 18645729 18645873 - Gm23386 scaRNA scaRNA MGP_CBAJ_T0031341.1 MGP_CBAJ_G0018676.1 mouse_genomes_project 11 103385515 103389509 + MGP_CBAJ_P0031341 Tob1 protein_coding protein_coding MGP_CBAJ_T0027585.1 MGP_CBAJ_G0017732.1 mouse_genomes_project 11 3033158 3174364 + MGP_CBAJ_P0027585 Ankrd36 protein_coding protein_coding MGP_CBAJ_T0027586.1 MGP_CBAJ_G0017732.1 mouse_genomes_project 11 3033171 3047758 + MGP_CBAJ_P0027586 Ankrd36 protein_coding protein_coding MGP_CBAJ_T0027587.1 MGP_CBAJ_G0017732.1 mouse_genomes_project 11 3033291 3139074 + MGP_CBAJ_P0027587 Ankrd36 protein_coding protein_coding MGP_CBAJ_T0027588.1 MGP_CBAJ_G0017732.1 mouse_genomes_project 11 3037557 3047608 + Ankrd36 protein_coding processed_transcript MGP_CBAJ_T0027589.1 MGP_CBAJ_G0017732.1 mouse_genomes_project 11 3100559 3122121 + MGP_CBAJ_P0027589 Ankrd36 protein_coding protein_coding MGP_CBAJ_T0027617.1 MGP_CBAJ_G0017741.1 mouse_genomes_project 11 3440852 3459731 - MGP_CBAJ_P0027617 Gck protein_coding protein_coding MGP_CBAJ_T0027618.1 MGP_CBAJ_G0017741.1 mouse_genomes_project 11 3440852 3459731 - MGP_CBAJ_P0027618 Gck protein_coding protein_coding MGP_CBAJ_T0027619.1 MGP_CBAJ_G0017741.1 mouse_genomes_project 11 3440855 3505866 - MGP_CBAJ_P0027619 Gck protein_coding protein_coding MGP_CBAJ_T0027620.1 MGP_CBAJ_G0017741.1 mouse_genomes_project 11 3441601 3442120 - MGP_CBAJ_P0027620 Gck protein_coding protein_coding MGP_CBAJ_T0016957.1 MGP_CBAJ_G0014924.1 mouse_genomes_project 11 82046442 82053561 + Mir22hg processed_transcript processed_transcript MGP_CBAJ_T0016958.1 MGP_CBAJ_G0014924.1 mouse_genomes_project 11 82046547 82048933 + Mir22hg processed_transcript processed_transcript MGP_CBAJ_T0098731.1 MGP_CBAJ_G0036986.1 mouse_genomes_project 11 116274632 116274737 + Gm25362 snRNA snRNA MGP_CBAJ_T0032944.1 MGP_CBAJ_G0019075.1 mouse_genomes_project 11 126015891 126040007 - MGP_CBAJ_P0032944 Cdc42ep4 protein_coding protein_coding MGP_CBAJ_T0032945.1 MGP_CBAJ_G0019075.1 mouse_genomes_project 11 126015893 126040574 - MGP_CBAJ_P0032945 Cdc42ep4 protein_coding protein_coding MGP_CBAJ_T0032946.1 MGP_CBAJ_G0019075.1 mouse_genomes_project 11 126018008 126028342 - MGP_CBAJ_P0032946 Cdc42ep4 protein_coding protein_coding MGP_CBAJ_T0032947.1 MGP_CBAJ_G0019075.1 mouse_genomes_project 11 126018330 126039843 - MGP_CBAJ_P0032947 Cdc42ep4 protein_coding protein_coding MGP_CBAJ_T0030388.1 MGP_CBAJ_G0018443.1 mouse_genomes_project 11 82278560 82304096 + MGP_CBAJ_P0030388 Myo1c protein_coding protein_coding MGP_CBAJ_T0030389.1 MGP_CBAJ_G0018443.1 mouse_genomes_project 11 82284354 82299773 + Myo1c protein_coding retained_intron MGP_CBAJ_T0030390.1 MGP_CBAJ_G0018443.1 mouse_genomes_project 11 82284389 82304100 + MGP_CBAJ_P0030390 Myo1c protein_coding protein_coding MGP_CBAJ_T0030391.1 MGP_CBAJ_G0018443.1 mouse_genomes_project 11 82284403 82285854 + MGP_CBAJ_P0030391 Myo1c protein_coding protein_coding MGP_CBAJ_T0030392.1 MGP_CBAJ_G0018443.1 mouse_genomes_project 11 82289943 82296012 + Myo1c protein_coding retained_intron MGP_CBAJ_T0030393.1 MGP_CBAJ_G0018443.1 mouse_genomes_project 11 82295494 82299321 + Myo1c protein_coding retained_intron MGP_CBAJ_T0030394.1 MGP_CBAJ_G0018443.1 mouse_genomes_project 11 82298172 82300440 + Myo1c protein_coding retained_intron MGP_CBAJ_T0030395.1 MGP_CBAJ_G0018443.1 mouse_genomes_project 11 82300461 82301913 + Myo1c protein_coding retained_intron MGP_CBAJ_T0031981.1 MGP_CBAJ_G0018873.1 mouse_genomes_project 11 110798567 110804963 - MGP_CBAJ_P0031981 P3h4 protein_coding protein_coding MGP_CBAJ_T0031982.1 MGP_CBAJ_G0018873.1 mouse_genomes_project 11 110799477 110802001 - MGP_CBAJ_P0031982 P3h4 protein_coding protein_coding MGP_CBAJ_T0003137.1 MGP_CBAJ_G0002911.1 mouse_genomes_project 11 72249491 72294856 - Gm12298 antisense antisense MGP_CBAJ_T0012486.1 MGP_CBAJ_G0010598.1 mouse_genomes_project 11 67520363 67520662 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006255.1 MGP_CBAJ_G0005209.1 mouse_genomes_project 11 121687633 121690234 + 1700023C21Rik lincRNA lincRNA MGP_CBAJ_T0030017.1 MGP_CBAJ_G0018341.1 mouse_genomes_project 11 76823431 76835723 - MGP_CBAJ_P0030017 Scimp protein_coding protein_coding MGP_CBAJ_T0028883.1 MGP_CBAJ_G0018065.1 mouse_genomes_project 11 61931711 61940585 + MGP_CBAJ_P0028883 Sap30l protein_coding protein_coding MGP_CBAJ_T0000807.1 MGP_CBAJ_G0000743.1 mouse_genomes_project 11 17784897 17788066 - TEC TEC MGP_CBAJ_T0009536.1 MGP_CBAJ_G0007674.1 mouse_genomes_project 11 20633883 20633971 - Mir1933 miRNA miRNA MGP_CBAJ_T0003228.1 MGP_CBAJ_G0002981.1 mouse_genomes_project 11 112181561 112187073 - antisense antisense MGP_CBAJ_T0031938.1 MGP_CBAJ_G0018853.1 mouse_genomes_project 11 110325048 110325809 - MGP_CBAJ_P0031938 Krtap17-1 protein_coding protein_coding MGP_CBAJ_T0012424.1 MGP_CBAJ_G0010536.1 mouse_genomes_project 11 43613562 43613894 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0028261.1 MGP_CBAJ_G0017894.1 mouse_genomes_project 11 44218663 44238288 - MGP_CBAJ_P0028261 Gabra6 protein_coding protein_coding MGP_CBAJ_T0028262.1 MGP_CBAJ_G0017894.1 mouse_genomes_project 11 44218664 44238290 - MGP_CBAJ_P0028262 Gabra6 protein_coding protein_coding MGP_CBAJ_T0028263.1 MGP_CBAJ_G0017894.1 mouse_genomes_project 11 44222026 44238311 - MGP_CBAJ_P0028263 Gabra6 protein_coding protein_coding MGP_CBAJ_T0028037.1 MGP_CBAJ_G0017837.1 mouse_genomes_project 11 29844690 29845516 - Rps27a protein_coding processed_transcript MGP_CBAJ_T0028038.1 MGP_CBAJ_G0017837.1 mouse_genomes_project 11 29844690 29846705 - MGP_CBAJ_P0028038 Rps27a protein_coding protein_coding MGP_CBAJ_T0028039.1 MGP_CBAJ_G0017837.1 mouse_genomes_project 11 29844690 29846954 - MGP_CBAJ_P0028039 Rps27a protein_coding protein_coding MGP_CBAJ_T0028040.1 MGP_CBAJ_G0017837.1 mouse_genomes_project 11 29844743 29846727 - Rps27a protein_coding processed_transcript MGP_CBAJ_T0028041.1 MGP_CBAJ_G0017837.1 mouse_genomes_project 11 29845960 29846736 - Rps27a protein_coding processed_transcript MGP_CBAJ_T0003264.1 MGP_CBAJ_G0003012.1 mouse_genomes_project 11 121599840 121601960 + Gm11684 antisense antisense MGP_CBAJ_T0028908.1 MGP_CBAJ_G0018074.1 mouse_genomes_project 11 62508416 62526707 + MGP_CBAJ_P0028908 protein_coding protein_coding MGP_CBAJ_T0012581.1 MGP_CBAJ_G0010693.1 mouse_genomes_project 11 112808514 112808839 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0027701.1 MGP_CBAJ_G0017758.1 mouse_genomes_project 11 4310240 4312225 - Wap protein_coding processed_transcript MGP_CBAJ_T0027702.1 MGP_CBAJ_G0017758.1 mouse_genomes_project 11 4310240 4313268 - MGP_CBAJ_P0027702 Wap protein_coding protein_coding MGP_CBAJ_T0027703.1 MGP_CBAJ_G0017758.1 mouse_genomes_project 11 4310297 4312214 - Wap protein_coding processed_transcript MGP_CBAJ_T0029141.1 MGP_CBAJ_G0018153.1 mouse_genomes_project 11 65352743 65378947 - MGP_CBAJ_P0029141 Shmt1 protein_coding protein_coding MGP_CBAJ_T0029142.1 MGP_CBAJ_G0018153.1 mouse_genomes_project 11 65353539 65365280 - Shmt1 protein_coding processed_transcript MGP_CBAJ_T0029143.1 MGP_CBAJ_G0018153.1 mouse_genomes_project 11 65353782 65374679 - MGP_CBAJ_P0029143 Shmt1 protein_coding protein_coding MGP_CBAJ_T0029144.1 MGP_CBAJ_G0018153.1 mouse_genomes_project 11 65353782 65374679 - MGP_CBAJ_P0029144 Shmt1 protein_coding protein_coding MGP_CBAJ_T0029145.1 MGP_CBAJ_G0018153.1 mouse_genomes_project 11 65353782 65374679 - MGP_CBAJ_P0029145 Shmt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029146.1 MGP_CBAJ_G0018153.1 mouse_genomes_project 11 65353886 65359419 - Shmt1 protein_coding retained_intron MGP_CBAJ_T0029147.1 MGP_CBAJ_G0018153.1 mouse_genomes_project 11 65354234 65357815 - Shmt1 protein_coding retained_intron MGP_CBAJ_T0029148.1 MGP_CBAJ_G0018153.1 mouse_genomes_project 11 65357590 65363730 - Shmt1 protein_coding retained_intron MGP_CBAJ_T0029149.1 MGP_CBAJ_G0018153.1 mouse_genomes_project 11 65363121 65378773 - Shmt1 protein_coding retained_intron MGP_CBAJ_T0029150.1 MGP_CBAJ_G0018153.1 mouse_genomes_project 11 65364528 65368519 - Shmt1 protein_coding processed_transcript MGP_CBAJ_T0029151.1 MGP_CBAJ_G0018153.1 mouse_genomes_project 11 65371881 65379405 - Shmt1 protein_coding processed_transcript MGP_CBAJ_T0012312.1 MGP_CBAJ_G0010424.1 mouse_genomes_project 11 1056779 1057604 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0031652.1 MGP_CBAJ_G0018755.1 mouse_genomes_project 11 107087721 107108419 - MGP_CBAJ_P0031652 Gpr179 protein_coding protein_coding MGP_CBAJ_T0031653.1 MGP_CBAJ_G0018755.1 mouse_genomes_project 11 107105810 107108480 - Gpr179 protein_coding retained_intron MGP_CBAJ_T0029336.1 MGP_CBAJ_G0018187.1 mouse_genomes_project 11 67526744 67563710 - MGP_CBAJ_P0029336 Zfp287 protein_coding protein_coding MGP_CBAJ_T0029337.1 MGP_CBAJ_G0018187.1 mouse_genomes_project 11 67539316 67563667 - MGP_CBAJ_P0029337 Zfp287 protein_coding protein_coding MGP_CBAJ_T0029338.1 MGP_CBAJ_G0018187.1 mouse_genomes_project 11 67553397 67560456 - MGP_CBAJ_P0029338 Zfp287 protein_coding protein_coding MGP_CBAJ_T0029339.1 MGP_CBAJ_G0018187.1 mouse_genomes_project 11 67558507 67563730 - Zfp287 protein_coding retained_intron MGP_CBAJ_T0028391.1 MGP_CBAJ_G0017931.1 mouse_genomes_project 11 51530925 51544324 - MGP_CBAJ_P0028391 Trim41 protein_coding protein_coding MGP_CBAJ_T0028392.1 MGP_CBAJ_G0017931.1 mouse_genomes_project 11 51532907 51536917 - MGP_CBAJ_P0028392 Trim41 protein_coding protein_coding MGP_CBAJ_T0028393.1 MGP_CBAJ_G0017931.1 mouse_genomes_project 11 51533618 51543924 - MGP_CBAJ_P0028393 Trim41 protein_coding protein_coding MGP_CBAJ_T0028394.1 MGP_CBAJ_G0017931.1 mouse_genomes_project 11 51533720 51540753 - MGP_CBAJ_P0028394 Trim41 protein_coding protein_coding MGP_CBAJ_T0032457.1 MGP_CBAJ_G0018966.1 mouse_genomes_project 11 113662458 113712945 - MGP_CBAJ_P0032457 Eftud2 protein_coding protein_coding MGP_CBAJ_T0032458.1 MGP_CBAJ_G0018966.1 mouse_genomes_project 11 113662458 113712963 - MGP_CBAJ_P0032458 Eftud2 protein_coding protein_coding MGP_CBAJ_T0032459.1 MGP_CBAJ_G0018966.1 mouse_genomes_project 11 113662462 113668239 - MGP_CBAJ_P0032459 Eftud2 protein_coding protein_coding MGP_CBAJ_T0032460.1 MGP_CBAJ_G0018966.1 mouse_genomes_project 11 113662786 113709697 - MGP_CBAJ_P0032460 Eftud2 protein_coding protein_coding MGP_CBAJ_T0032461.1 MGP_CBAJ_G0018966.1 mouse_genomes_project 11 113662823 113665239 - MGP_CBAJ_P0032461 Eftud2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032462.1 MGP_CBAJ_G0018966.1 mouse_genomes_project 11 113663435 113664662 - Eftud2 protein_coding retained_intron MGP_CBAJ_T0032463.1 MGP_CBAJ_G0018966.1 mouse_genomes_project 11 113664197 113672053 - Eftud2 protein_coding retained_intron MGP_CBAJ_T0032464.1 MGP_CBAJ_G0018966.1 mouse_genomes_project 11 113673262 113684295 - Eftud2 protein_coding retained_intron MGP_CBAJ_T0032465.1 MGP_CBAJ_G0018966.1 mouse_genomes_project 11 113689692 113709673 - MGP_CBAJ_P0032465 Eftud2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032466.1 MGP_CBAJ_G0018966.1 mouse_genomes_project 11 113690947 113693046 - Eftud2 protein_coding retained_intron MGP_CBAJ_T0032467.1 MGP_CBAJ_G0018966.1 mouse_genomes_project 11 113692938 113712942 - Eftud2 protein_coding retained_intron MGP_CBAJ_T0032468.1 MGP_CBAJ_G0018966.1 mouse_genomes_project 11 113698210 113709698 - Eftud2 protein_coding retained_intron MGP_CBAJ_T0032469.1 MGP_CBAJ_G0018966.1 mouse_genomes_project 11 113708946 113712913 - Eftud2 protein_coding retained_intron MGP_CBAJ_T0027468.1 MGP_CBAJ_G0017707.1 mouse_genomes_project 11 1445342 1476552 + Tbc1d10a protein_coding processed_transcript MGP_CBAJ_T0027469.1 MGP_CBAJ_G0017707.1 mouse_genomes_project 11 1445342 1477172 + MGP_CBAJ_P0027469 Tbc1d10a protein_coding protein_coding MGP_CBAJ_T0027470.1 MGP_CBAJ_G0017707.1 mouse_genomes_project 11 1445375 1477169 + MGP_CBAJ_P0027470 Tbc1d10a protein_coding protein_coding MGP_CBAJ_T0027471.1 MGP_CBAJ_G0017707.1 mouse_genomes_project 11 1467089 1471657 + Tbc1d10a protein_coding processed_transcript MGP_CBAJ_T0027472.1 MGP_CBAJ_G0017707.1 mouse_genomes_project 11 1473977 1475267 + Tbc1d10a protein_coding processed_transcript MGP_CBAJ_T0027473.1 MGP_CBAJ_G0017707.1 mouse_genomes_project 11 1474141 1475523 + Tbc1d10a protein_coding processed_transcript MGP_CBAJ_T0012561.1 MGP_CBAJ_G0010673.1 mouse_genomes_project 11 102823304 102823768 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009635.1 MGP_CBAJ_G0007773.1 mouse_genomes_project 11 115309842 115309913 - miRNA miRNA MGP_CBAJ_T0011187.1 MGP_CBAJ_G0009325.1 mouse_genomes_project 11 105741679 105741815 - Gm27605 misc_RNA misc_RNA MGP_CBAJ_T0016952.1 MGP_CBAJ_G0014921.1 mouse_genomes_project 11 78356782 78360095 + 4930563E22Rik processed_transcript processed_transcript MGP_CBAJ_T0016953.1 MGP_CBAJ_G0014921.1 mouse_genomes_project 11 78356816 78360089 + 4930563E22Rik processed_transcript processed_transcript MGP_CBAJ_T0031536.1 MGP_CBAJ_G0018728.1 mouse_genomes_project 11 105838036 105841400 + MGP_CBAJ_P0031536 Hoxb8 protein_coding protein_coding MGP_CBAJ_T0031537.1 MGP_CBAJ_G0018728.1 mouse_genomes_project 11 105838687 105840400 + MGP_CBAJ_P0031537 Hoxb8 protein_coding protein_coding MGP_CBAJ_T0031538.1 MGP_CBAJ_G0018728.1 mouse_genomes_project 11 105838856 105840778 + MGP_CBAJ_P0031538 Hoxb8 protein_coding protein_coding MGP_CBAJ_T0003282.1 MGP_CBAJ_G0003028.1 mouse_genomes_project 11 131443865 131454733 - Gm11747 antisense antisense MGP_CBAJ_T0031015.1 MGP_CBAJ_G0018599.1 mouse_genomes_project 11 92732692 92736569 - MGP_CBAJ_P0031015 Pigw protein_coding protein_coding MGP_CBAJ_T0031016.1 MGP_CBAJ_G0018599.1 mouse_genomes_project 11 92733220 92736659 - MGP_CBAJ_P0031016 Pigw protein_coding protein_coding MGP_CBAJ_T0097756.1 MGP_CBAJ_G0036029.1 mouse_genomes_project 11 76515511 76516089 - pseudogene pseudogene MGP_CBAJ_T0030111.1 MGP_CBAJ_G0018358.1 mouse_genomes_project 11 78351537 78357237 - MGP_CBAJ_P0030111 Med31 protein_coding protein_coding MGP_CBAJ_T0030112.1 MGP_CBAJ_G0018358.1 mouse_genomes_project 11 78353021 78356698 - Med31 protein_coding retained_intron MGP_CBAJ_T0009645.1 MGP_CBAJ_G0007783.1 mouse_genomes_project 11 128414613 128414676 + Mir5621 miRNA miRNA MGP_CBAJ_T0029964.1 MGP_CBAJ_G0018331.1 mouse_genomes_project 11 76643103 76646018 + MGP_CBAJ_P0029964 Gp1ba protein_coding protein_coding MGP_CBAJ_T0029965.1 MGP_CBAJ_G0018331.1 mouse_genomes_project 11 76643125 76645802 + MGP_CBAJ_P0029965 Gp1ba protein_coding protein_coding MGP_CBAJ_T0003046.1 MGP_CBAJ_G0002834.1 mouse_genomes_project 11 4119342 4144968 + Gm11973 antisense antisense MGP_CBAJ_T0029649.1 MGP_CBAJ_G0018262.1 mouse_genomes_project 11 75343617 75349723 - MGP_CBAJ_P0029649 Efnb3 protein_coding protein_coding MGP_CBAJ_T0099951.1 MGP_CBAJ_G0038206.1 mouse_genomes_project 11 99486783 99486920 - Gm22762 snoRNA snoRNA MGP_CBAJ_T0029824.1 MGP_CBAJ_G0018302.1 mouse_genomes_project 11 75876567 75886084 + MGP_CBAJ_P0029824 Dvl2 protein_coding protein_coding MGP_CBAJ_T0029825.1 MGP_CBAJ_G0018302.1 mouse_genomes_project 11 75876589 75888274 + MGP_CBAJ_P0029825 Dvl2 protein_coding protein_coding MGP_CBAJ_T0029826.1 MGP_CBAJ_G0018302.1 mouse_genomes_project 11 75876793 75882934 + Dvl2 protein_coding retained_intron MGP_CBAJ_T0029827.1 MGP_CBAJ_G0018302.1 mouse_genomes_project 11 75876807 75881986 + Dvl2 protein_coding retained_intron MGP_CBAJ_T0029828.1 MGP_CBAJ_G0018302.1 mouse_genomes_project 11 75881430 75883446 + Dvl2 protein_coding retained_intron MGP_CBAJ_T0029829.1 MGP_CBAJ_G0018302.1 mouse_genomes_project 11 75882952 75884042 + Dvl2 protein_coding retained_intron MGP_CBAJ_T0098184.1 MGP_CBAJ_G0036457.1 mouse_genomes_project 11 128825515 128825642 - Gm26413 scaRNA scaRNA MGP_CBAJ_T0012372.1 MGP_CBAJ_G0010484.1 mouse_genomes_project 11 21033537 21034177 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012329.1 MGP_CBAJ_G0010441.1 mouse_genomes_project 11 4547258 4547572 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031407.1 MGP_CBAJ_G0018689.1 mouse_genomes_project 11 103899983 103915320 + MGP_CBAJ_P0031407 Lrrc59 protein_coding protein_coding MGP_CBAJ_T0031408.1 MGP_CBAJ_G0018689.1 mouse_genomes_project 11 103900030 103905423 + Lrrc59 protein_coding retained_intron MGP_CBAJ_T0029640.1 MGP_CBAJ_G0018260.1 mouse_genomes_project 11 75163301 75180480 - MGP_CBAJ_P0029640 Kdm6b protein_coding protein_coding MGP_CBAJ_T0029641.1 MGP_CBAJ_G0018260.1 mouse_genomes_project 11 75164621 75176120 - MGP_CBAJ_P0029641 Kdm6b protein_coding unknown_likely_coding MGP_CBAJ_T0029642.1 MGP_CBAJ_G0018260.1 mouse_genomes_project 11 75168094 75169032 - Kdm6b protein_coding processed_transcript MGP_CBAJ_T0027745.1 MGP_CBAJ_G0017773.1 mouse_genomes_project 11 9678920 9705898 + protein_coding processed_transcript MGP_CBAJ_T0027746.1 MGP_CBAJ_G0017773.1 mouse_genomes_project 11 9681072 9737378 + MGP_CBAJ_P0027746 protein_coding protein_coding MGP_CBAJ_T0027747.1 MGP_CBAJ_G0017773.1 mouse_genomes_project 11 9706626 9737376 + MGP_CBAJ_P0027747 protein_coding protein_coding MGP_CBAJ_T0006203.1 MGP_CBAJ_G0005173.1 mouse_genomes_project 11 90913617 90917122 + AI662270 lincRNA lincRNA MGP_CBAJ_T0006204.1 MGP_CBAJ_G0005173.1 mouse_genomes_project 11 90913617 90915908 + AI662270 lincRNA lincRNA MGP_CBAJ_T0006205.1 MGP_CBAJ_G0005173.1 mouse_genomes_project 11 90914190 90914632 + AI662270 lincRNA lincRNA MGP_CBAJ_T0030686.1 MGP_CBAJ_G0018506.1 mouse_genomes_project 11 85596382 85597877 + Vtn protein_coding retained_intron MGP_CBAJ_T0030687.1 MGP_CBAJ_G0018506.1 mouse_genomes_project 11 85596411 85599616 + MGP_CBAJ_P0030687 Vtn protein_coding protein_coding MGP_CBAJ_T0030688.1 MGP_CBAJ_G0018506.1 mouse_genomes_project 11 85596463 85597536 + Vtn protein_coding retained_intron MGP_CBAJ_T0030689.1 MGP_CBAJ_G0018506.1 mouse_genomes_project 11 85597897 85599514 + Vtn protein_coding retained_intron MGP_CBAJ_T0029060.1 MGP_CBAJ_G0018138.1 mouse_genomes_project 11 64427242 64516531 - MGP_CBAJ_P0029060 Pemt protein_coding protein_coding MGP_CBAJ_T0029061.1 MGP_CBAJ_G0018138.1 mouse_genomes_project 11 64427246 64428142 - Pemt protein_coding processed_transcript MGP_CBAJ_T0029062.1 MGP_CBAJ_G0018138.1 mouse_genomes_project 11 64427459 64499259 - Pemt protein_coding processed_transcript MGP_CBAJ_T0029063.1 MGP_CBAJ_G0018138.1 mouse_genomes_project 11 64427476 64494169 - MGP_CBAJ_P0029063 Pemt protein_coding protein_coding MGP_CBAJ_T0029064.1 MGP_CBAJ_G0018138.1 mouse_genomes_project 11 64433864 64516585 - MGP_CBAJ_P0029064 Pemt protein_coding protein_coding MGP_CBAJ_T0029065.1 MGP_CBAJ_G0018138.1 mouse_genomes_project 11 64436578 64483394 - Pemt protein_coding processed_transcript MGP_CBAJ_T0029066.1 MGP_CBAJ_G0018138.1 mouse_genomes_project 11 64436598 64443365 - Pemt protein_coding processed_transcript MGP_CBAJ_T0029067.1 MGP_CBAJ_G0018138.1 mouse_genomes_project 11 64514632 64516581 - Pemt protein_coding processed_transcript MGP_CBAJ_T0030533.1 MGP_CBAJ_G0018475.1 mouse_genomes_project 11 84425903 84518289 - MGP_CBAJ_P0030533 Taok1 protein_coding unknown_likely_coding MGP_CBAJ_T0028950.1 MGP_CBAJ_G0018096.1 mouse_genomes_project 11 62982871 62983894 + MGP_CBAJ_P0028950 protein_coding protein_coding MGP_CBAJ_T0012491.1 MGP_CBAJ_G0010603.1 mouse_genomes_project 11 70318686 70319278 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0033032.1 MGP_CBAJ_G0019098.1 mouse_genomes_project 11 127764357 127773253 - Fdxr protein_coding processed_transcript MGP_CBAJ_T0033033.1 MGP_CBAJ_G0019098.1 mouse_genomes_project 11 127764357 127773389 - MGP_CBAJ_P0033033 Fdxr protein_coding protein_coding MGP_CBAJ_T0033034.1 MGP_CBAJ_G0019098.1 mouse_genomes_project 11 127764681 127765348 - Fdxr protein_coding processed_transcript MGP_CBAJ_T0033035.1 MGP_CBAJ_G0019098.1 mouse_genomes_project 11 127768165 127773063 - Fdxr protein_coding processed_transcript MGP_CBAJ_T0012437.1 MGP_CBAJ_G0010549.1 mouse_genomes_project 11 51443712 51444669 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0028430.1 MGP_CBAJ_G0017947.1 mouse_genomes_project 11 52036441 52054541 + MGP_CBAJ_P0028430 Zfp62 protein_coding protein_coding MGP_CBAJ_T0028431.1 MGP_CBAJ_G0017947.1 mouse_genomes_project 11 52036445 52051268 + MGP_CBAJ_P0028431 Zfp62 protein_coding protein_coding MGP_CBAJ_T0028432.1 MGP_CBAJ_G0017947.1 mouse_genomes_project 11 52036634 52049624 + Zfp62 protein_coding processed_transcript MGP_CBAJ_T0028433.1 MGP_CBAJ_G0017947.1 mouse_genomes_project 11 52036634 52050898 + Zfp62 protein_coding retained_intron MGP_CBAJ_T0028434.1 MGP_CBAJ_G0017947.1 mouse_genomes_project 11 52036634 52051099 + MGP_CBAJ_P0028434 Zfp62 protein_coding protein_coding MGP_CBAJ_T0028435.1 MGP_CBAJ_G0017947.1 mouse_genomes_project 11 52036647 52054804 + MGP_CBAJ_P0028435 Zfp62 protein_coding protein_coding MGP_CBAJ_T0028436.1 MGP_CBAJ_G0017947.1 mouse_genomes_project 11 52036655 52051658 + MGP_CBAJ_P0028436 Zfp62 protein_coding protein_coding MGP_CBAJ_T0028437.1 MGP_CBAJ_G0017947.1 mouse_genomes_project 11 52036883 52051165 + MGP_CBAJ_P0028437 Zfp62 protein_coding protein_coding MGP_CBAJ_T0028438.1 MGP_CBAJ_G0017947.1 mouse_genomes_project 11 52037468 52053751 + MGP_CBAJ_P0028438 Zfp62 protein_coding protein_coding MGP_CBAJ_T0028439.1 MGP_CBAJ_G0017947.1 mouse_genomes_project 11 52048675 52054797 + MGP_CBAJ_P0028439 Zfp62 protein_coding protein_coding MGP_CBAJ_T0028440.1 MGP_CBAJ_G0017947.1 mouse_genomes_project 11 52049579 52051311 + MGP_CBAJ_P0028440 Zfp62 protein_coding protein_coding MGP_CBAJ_T0028441.1 MGP_CBAJ_G0017947.1 mouse_genomes_project 11 52050536 52054797 + MGP_CBAJ_P0028441 Zfp62 protein_coding protein_coding MGP_CBAJ_T0032934.1 MGP_CBAJ_G0019072.1 mouse_genomes_project 11 125948074 125971101 - MGP_CBAJ_P0032934 Fam104a protein_coding protein_coding MGP_CBAJ_T0030360.1 MGP_CBAJ_G0018438.1 mouse_genomes_project 11 82110656 82113731 + MGP_CBAJ_P0030360 Rilp protein_coding protein_coding MGP_CBAJ_T0030361.1 MGP_CBAJ_G0018438.1 mouse_genomes_project 11 82111029 82113726 + Rilp protein_coding retained_intron MGP_CBAJ_T0027341.1 MGP_CBAJ_G0017682.1 mouse_genomes_project 11 323116 344244 - MGP_CBAJ_P0027341 Drg1 protein_coding protein_coding MGP_CBAJ_T0027342.1 MGP_CBAJ_G0017682.1 mouse_genomes_project 11 323306 326067 - Drg1 protein_coding retained_intron MGP_CBAJ_T0027343.1 MGP_CBAJ_G0017682.1 mouse_genomes_project 11 327618 340397 - Drg1 protein_coding retained_intron MGP_CBAJ_T0027344.1 MGP_CBAJ_G0017682.1 mouse_genomes_project 11 329676 344243 - Drg1 protein_coding processed_transcript MGP_CBAJ_T0027345.1 MGP_CBAJ_G0017682.1 mouse_genomes_project 11 330863 344266 - Drg1 protein_coding retained_intron MGP_CBAJ_T0027346.1 MGP_CBAJ_G0017682.1 mouse_genomes_project 11 332460 344244 - MGP_CBAJ_P0027346 Drg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033183.1 MGP_CBAJ_G0019124.1 mouse_genomes_project 11 128482530 128523276 + MGP_CBAJ_P0033183 Myo15b protein_coding protein_coding MGP_CBAJ_T0033184.1 MGP_CBAJ_G0019124.1 mouse_genomes_project 11 128501891 128504548 + Myo15b protein_coding processed_transcript MGP_CBAJ_T0033185.1 MGP_CBAJ_G0019124.1 mouse_genomes_project 11 128501909 128505654 + MGP_CBAJ_P0033185 Myo15b protein_coding protein_coding MGP_CBAJ_T0033186.1 MGP_CBAJ_G0019124.1 mouse_genomes_project 11 128504817 128518164 + MGP_CBAJ_P0033186 Myo15b protein_coding protein_coding MGP_CBAJ_T0033187.1 MGP_CBAJ_G0019124.1 mouse_genomes_project 11 128517156 128518165 + MGP_CBAJ_P0033187 Myo15b protein_coding protein_coding MGP_CBAJ_T0033188.1 MGP_CBAJ_G0019124.1 mouse_genomes_project 11 128517525 128523272 + Myo15b protein_coding retained_intron MGP_CBAJ_T0033189.1 MGP_CBAJ_G0019124.1 mouse_genomes_project 11 128518319 128523287 + MGP_CBAJ_P0033189 Myo15b protein_coding protein_coding MGP_CBAJ_T0033190.1 MGP_CBAJ_G0019124.1 mouse_genomes_project 11 128520922 128521853 + Myo15b protein_coding retained_intron MGP_CBAJ_T0012363.1 MGP_CBAJ_G0010475.1 mouse_genomes_project 11 19949047 19949577 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0030613.1 MGP_CBAJ_G0018489.1 mouse_genomes_project 11 85191876 85195646 + MGP_CBAJ_P0030613 Tlcd1 protein_coding protein_coding MGP_CBAJ_T0030614.1 MGP_CBAJ_G0018489.1 mouse_genomes_project 11 85193295 85194788 + MGP_CBAJ_P0030614 Tlcd1 protein_coding protein_coding MGP_CBAJ_T0030615.1 MGP_CBAJ_G0018489.1 mouse_genomes_project 11 85193314 85195320 + Tlcd1 protein_coding processed_transcript MGP_CBAJ_T0030616.1 MGP_CBAJ_G0018489.1 mouse_genomes_project 11 85193816 85197075 + MGP_CBAJ_P0030616 Tlcd1 protein_coding protein_coding MGP_CBAJ_T0030617.1 MGP_CBAJ_G0018489.1 mouse_genomes_project 11 85193850 85195986 + MGP_CBAJ_P0030617 Tlcd1 protein_coding protein_coding MGP_CBAJ_T0030618.1 MGP_CBAJ_G0018489.1 mouse_genomes_project 11 85193896 85194773 + Tlcd1 protein_coding retained_intron MGP_CBAJ_T0030619.1 MGP_CBAJ_G0018489.1 mouse_genomes_project 11 85193927 85195041 + MGP_CBAJ_P0030619 Tlcd1 protein_coding protein_coding MGP_CBAJ_T0030620.1 MGP_CBAJ_G0018489.1 mouse_genomes_project 11 85194438 85195257 + Tlcd1 protein_coding retained_intron MGP_CBAJ_T0028407.1 MGP_CBAJ_G0017937.1 mouse_genomes_project 11 51824401 51845226 - MGP_CBAJ_P0028407 protein_coding protein_coding MGP_CBAJ_T0009531.1 MGP_CBAJ_G0007669.1 mouse_genomes_project 11 2245408 2245466 + Mir6918 miRNA miRNA MGP_CBAJ_T0033530.1 MGP_CBAJ_G0019192.1 mouse_genomes_project 11 132072289 132080605 + MGP_CBAJ_P0033530 Cbx2 protein_coding protein_coding MGP_CBAJ_T0033531.1 MGP_CBAJ_G0019192.1 mouse_genomes_project 11 132073052 132077373 + Cbx2 protein_coding processed_transcript MGP_CBAJ_T0033716.1 MGP_CBAJ_G0019227.1 mouse_genomes_project 11 133824467 133832753 + MGP_CBAJ_P0033716 Gcgr protein_coding protein_coding MGP_CBAJ_T0033717.1 MGP_CBAJ_G0019227.1 mouse_genomes_project 11 133824512 133832755 + Gcgr protein_coding processed_transcript MGP_CBAJ_T0033718.1 MGP_CBAJ_G0019227.1 mouse_genomes_project 11 133824542 133832752 + Gcgr protein_coding processed_transcript MGP_CBAJ_T0033719.1 MGP_CBAJ_G0019227.1 mouse_genomes_project 11 133828448 133830478 + Gcgr protein_coding processed_transcript MGP_CBAJ_T0027948.1 MGP_CBAJ_G0017818.1 mouse_genomes_project 11 23171936 23243555 - MGP_CBAJ_P0027948 0610010F05Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0027949.1 MGP_CBAJ_G0017818.1 mouse_genomes_project 11 23180975 23243551 - MGP_CBAJ_P0027949 0610010F05Rik protein_coding protein_coding MGP_CBAJ_T0027950.1 MGP_CBAJ_G0017818.1 mouse_genomes_project 11 23184364 23203187 - MGP_CBAJ_P0027950 0610010F05Rik protein_coding protein_coding MGP_CBAJ_T0027951.1 MGP_CBAJ_G0017818.1 mouse_genomes_project 11 23238882 23243637 - MGP_CBAJ_P0027951 0610010F05Rik protein_coding protein_coding MGP_CBAJ_T0099912.1 MGP_CBAJ_G0038167.1 mouse_genomes_project 11 25477693 25477823 + Gm23514 snoRNA snoRNA MGP_CBAJ_T0033043.1 MGP_CBAJ_G0019102.1 mouse_genomes_project 11 127843381 127855565 + MGP_CBAJ_P0033043 Otop3 protein_coding protein_coding MGP_CBAJ_T0033044.1 MGP_CBAJ_G0019102.1 mouse_genomes_project 11 127843384 127855564 + MGP_CBAJ_P0033044 Otop3 protein_coding protein_coding MGP_CBAJ_T0027557.1 MGP_CBAJ_G0017726.1 mouse_genomes_project 11 2495142 2502302 + MGP_CBAJ_P0027557 Rhbdd3 protein_coding protein_coding MGP_CBAJ_T0027558.1 MGP_CBAJ_G0017726.1 mouse_genomes_project 11 2495293 2496804 + Rhbdd3 protein_coding processed_transcript MGP_CBAJ_T0027559.1 MGP_CBAJ_G0017726.1 mouse_genomes_project 11 2495489 2496724 + Rhbdd3 protein_coding processed_transcript MGP_CBAJ_T0027560.1 MGP_CBAJ_G0017726.1 mouse_genomes_project 11 2495649 2499560 + MGP_CBAJ_P0027560 Rhbdd3 protein_coding protein_coding MGP_CBAJ_T0027561.1 MGP_CBAJ_G0017726.1 mouse_genomes_project 11 2495655 2502302 + MGP_CBAJ_P0027561 Rhbdd3 protein_coding protein_coding MGP_CBAJ_T0027562.1 MGP_CBAJ_G0017726.1 mouse_genomes_project 11 2495692 2499465 + MGP_CBAJ_P0027562 Rhbdd3 protein_coding protein_coding MGP_CBAJ_T0027563.1 MGP_CBAJ_G0017726.1 mouse_genomes_project 11 2495824 2499471 + MGP_CBAJ_P0027563 Rhbdd3 protein_coding protein_coding MGP_CBAJ_T0027564.1 MGP_CBAJ_G0017726.1 mouse_genomes_project 11 2496373 2502302 + MGP_CBAJ_P0027564 Rhbdd3 protein_coding protein_coding MGP_CBAJ_T0027565.1 MGP_CBAJ_G0017726.1 mouse_genomes_project 11 2496386 2501439 + MGP_CBAJ_P0027565 Rhbdd3 protein_coding protein_coding MGP_CBAJ_T0027566.1 MGP_CBAJ_G0017726.1 mouse_genomes_project 11 2496453 2502304 + Rhbdd3 protein_coding processed_transcript MGP_CBAJ_T0003238.1 MGP_CBAJ_G0002991.1 mouse_genomes_project 11 114300948 114302387 + Arhgap27os1 antisense antisense MGP_CBAJ_T0011189.1 MGP_CBAJ_G0009327.1 mouse_genomes_project 11 113213954 113214205 - Gm23563 misc_RNA misc_RNA MGP_CBAJ_T0031344.1 MGP_CBAJ_G0018678.1 mouse_genomes_project 11 103477869 103482053 + MGP_CBAJ_P0031344 protein_coding unknown_likely_coding MGP_CBAJ_T0031345.1 MGP_CBAJ_G0018678.1 mouse_genomes_project 11 103477902 103482053 + MGP_CBAJ_P0031345 protein_coding unknown_likely_coding MGP_CBAJ_T0031346.1 MGP_CBAJ_G0018678.1 mouse_genomes_project 11 103480724 103482053 + MGP_CBAJ_P0031346 protein_coding protein_coding MGP_CBAJ_T0003082.1 MGP_CBAJ_G0002865.1 mouse_genomes_project 11 53751145 53756608 - Gm12200 antisense antisense MGP_CBAJ_T0032954.1 MGP_CBAJ_G0019077.1 mouse_genomes_project 11 127036422 127040403 + MGP_CBAJ_P0032954 Rpl38 protein_coding protein_coding MGP_CBAJ_T0032955.1 MGP_CBAJ_G0019077.1 mouse_genomes_project 11 127036446 127040403 + MGP_CBAJ_P0032955 Rpl38 protein_coding protein_coding MGP_CBAJ_T0032956.1 MGP_CBAJ_G0019077.1 mouse_genomes_project 11 127036507 127040403 + MGP_CBAJ_P0032956 Rpl38 protein_coding protein_coding MGP_CBAJ_T0032957.1 MGP_CBAJ_G0019077.1 mouse_genomes_project 11 127036524 127040403 + MGP_CBAJ_P0032957 Rpl38 protein_coding protein_coding MGP_CBAJ_T0028618.1 MGP_CBAJ_G0017995.1 mouse_genomes_project 11 54842139 54848894 - MGP_CBAJ_P0028618 Hnrnpab protein_coding protein_coding MGP_CBAJ_T0028619.1 MGP_CBAJ_G0017995.1 mouse_genomes_project 11 54842908 54848894 - MGP_CBAJ_P0028619 Hnrnpab protein_coding protein_coding MGP_CBAJ_T0028620.1 MGP_CBAJ_G0017995.1 mouse_genomes_project 11 54843213 54848894 - MGP_CBAJ_P0028620 Hnrnpab protein_coding protein_coding MGP_CBAJ_T0033053.1 MGP_CBAJ_G0019104.1 mouse_genomes_project 11 127893459 127907759 + MGP_CBAJ_P0033053 Cdr2l protein_coding protein_coding MGP_CBAJ_T0029541.1 MGP_CBAJ_G0018239.1 mouse_genomes_project 11 74680260 74708951 - MGP_CBAJ_P0029541 Pfas protein_coding protein_coding MGP_CBAJ_T0029542.1 MGP_CBAJ_G0018239.1 mouse_genomes_project 11 74680263 74694864 - Pfas protein_coding retained_intron MGP_CBAJ_T0029543.1 MGP_CBAJ_G0018239.1 mouse_genomes_project 11 74681023 74691192 - Pfas protein_coding retained_intron MGP_CBAJ_T0029544.1 MGP_CBAJ_G0018239.1 mouse_genomes_project 11 74688550 74691937 - MGP_CBAJ_P0029544 Pfas protein_coding protein_coding MGP_CBAJ_T0029545.1 MGP_CBAJ_G0018239.1 mouse_genomes_project 11 74691306 74692413 - Pfas protein_coding retained_intron MGP_CBAJ_T0029546.1 MGP_CBAJ_G0018239.1 mouse_genomes_project 11 74693569 74698120 - MGP_CBAJ_P0029546 Pfas protein_coding protein_coding MGP_CBAJ_T0029547.1 MGP_CBAJ_G0018239.1 mouse_genomes_project 11 74697409 74708942 - Pfas protein_coding retained_intron MGP_CBAJ_T0012481.1 MGP_CBAJ_G0010593.1 mouse_genomes_project 11 65834203 65834659 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031850.1 MGP_CBAJ_G0018802.1 mouse_genomes_project 11 108950098 108985564 + MGP_CBAJ_P0031850 Wipf2 protein_coding protein_coding MGP_CBAJ_T0031851.1 MGP_CBAJ_G0018802.1 mouse_genomes_project 11 108950098 109002443 + MGP_CBAJ_P0031851 Wipf2 protein_coding protein_coding MGP_CBAJ_T0031852.1 MGP_CBAJ_G0018802.1 mouse_genomes_project 11 108950580 108986105 + Wipf2 protein_coding retained_intron MGP_CBAJ_T0031853.1 MGP_CBAJ_G0018802.1 mouse_genomes_project 11 108984437 108985362 + Wipf2 protein_coding retained_intron MGP_CBAJ_T0000812.1 MGP_CBAJ_G0000748.1 mouse_genomes_project 11 46863974 46872302 - TEC TEC MGP_CBAJ_T0032212.1 MGP_CBAJ_G0018925.1 mouse_genomes_project 11 112036233 112043023 + Rnd2 protein_coding processed_transcript MGP_CBAJ_T0032213.1 MGP_CBAJ_G0018925.1 mouse_genomes_project 11 112036718 112042275 + Rnd2 protein_coding processed_transcript MGP_CBAJ_T0032214.1 MGP_CBAJ_G0018925.1 mouse_genomes_project 11 112039409 112043023 + MGP_CBAJ_P0032214 Rnd2 protein_coding protein_coding MGP_CBAJ_T0032615.1 MGP_CBAJ_G0019002.1 mouse_genomes_project 11 116349412 116349781 + MGP_CBAJ_P0032615 Gm10842 protein_coding protein_coding MGP_CBAJ_T0006143.1 MGP_CBAJ_G0005124.1 mouse_genomes_project 11 48897143 48904030 - 2310031A07Rik lincRNA lincRNA MGP_CBAJ_T0033191.1 MGP_CBAJ_G0019125.1 mouse_genomes_project 11 128523278 128525820 - Recql5 protein_coding retained_intron MGP_CBAJ_T0033192.1 MGP_CBAJ_G0019125.1 mouse_genomes_project 11 128523278 128564435 - MGP_CBAJ_P0033192 Recql5 protein_coding protein_coding MGP_CBAJ_T0033193.1 MGP_CBAJ_G0019125.1 mouse_genomes_project 11 128523278 128564435 - MGP_CBAJ_P0033193 Recql5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033194.1 MGP_CBAJ_G0019125.1 mouse_genomes_project 11 128526098 128558345 - MGP_CBAJ_P0033194 Recql5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033195.1 MGP_CBAJ_G0019125.1 mouse_genomes_project 11 128526948 128564435 - Recql5 protein_coding retained_intron MGP_CBAJ_T0033196.1 MGP_CBAJ_G0019125.1 mouse_genomes_project 11 128527492 128537940 - Recql5 protein_coding processed_transcript MGP_CBAJ_T0033201.1 MGP_CBAJ_G0019125.1 mouse_genomes_project 11 128545385 128564435 - MGP_CBAJ_P0033201 Recql5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033202.1 MGP_CBAJ_G0019125.1 mouse_genomes_project 11 128556384 128558513 - Recql5 protein_coding retained_intron MGP_CBAJ_T0027502.1 MGP_CBAJ_G0017717.1 mouse_genomes_project 11 2060745 2070632 - MGP_CBAJ_P0027502 Cabp7 protein_coding protein_coding MGP_CBAJ_T0099950.1 MGP_CBAJ_G0038205.1 mouse_genomes_project 11 91061283 91061415 - Gm23951 snoRNA snoRNA MGP_CBAJ_T0006116.1 MGP_CBAJ_G0005100.1 mouse_genomes_project 11 28983291 29052054 + Gm12082 lincRNA lincRNA MGP_CBAJ_T0033573.1 MGP_CBAJ_G0019201.1 mouse_genomes_project 11 132464409 132501933 + MGP_CBAJ_P0033573 Slc26a11 protein_coding protein_coding MGP_CBAJ_T0033574.1 MGP_CBAJ_G0019201.1 mouse_genomes_project 11 132464440 132473898 + Slc26a11 protein_coding processed_transcript MGP_CBAJ_T0033575.1 MGP_CBAJ_G0019201.1 mouse_genomes_project 11 132464445 132489528 + Slc26a11 protein_coding processed_transcript MGP_CBAJ_T0033576.1 MGP_CBAJ_G0019201.1 mouse_genomes_project 11 132474291 132501903 + Slc26a11 protein_coding processed_transcript MGP_CBAJ_T0006133.1 MGP_CBAJ_G0005115.1 mouse_genomes_project 11 42212557 42213517 - 3110004A20Rik lincRNA lincRNA MGP_CBAJ_T0031966.1 MGP_CBAJ_G0018870.1 mouse_genomes_project 11 110717741 110720331 + MGP_CBAJ_P0031966 Gast protein_coding protein_coding MGP_CBAJ_T0030776.1 MGP_CBAJ_G0018530.1 mouse_genomes_project 11 87366808 87419889 + MGP_CBAJ_P0030776 Atad5 protein_coding protein_coding MGP_CBAJ_T0030777.1 MGP_CBAJ_G0018530.1 mouse_genomes_project 11 87366808 87419892 + MGP_CBAJ_P0030777 Atad5 protein_coding protein_coding MGP_CBAJ_T0030778.1 MGP_CBAJ_G0018530.1 mouse_genomes_project 11 87381635 87419892 + Atad5 protein_coding processed_transcript MGP_CBAJ_T0030779.1 MGP_CBAJ_G0018530.1 mouse_genomes_project 11 87382754 87388259 + Atad5 protein_coding retained_intron MGP_CBAJ_T0029488.1 MGP_CBAJ_G0018228.1 mouse_genomes_project 11 74091441 74148606 + MGP_CBAJ_P0029488 Pik3r6 protein_coding protein_coding MGP_CBAJ_T0029489.1 MGP_CBAJ_G0018228.1 mouse_genomes_project 11 74091441 74148606 + MGP_CBAJ_P0029489 Pik3r6 protein_coding protein_coding MGP_CBAJ_T0029490.1 MGP_CBAJ_G0018228.1 mouse_genomes_project 11 74091513 74148606 + Pik3r6 protein_coding processed_transcript MGP_CBAJ_T0029491.1 MGP_CBAJ_G0018228.1 mouse_genomes_project 11 74131173 74139360 + Pik3r6 protein_coding processed_transcript MGP_CBAJ_T0029492.1 MGP_CBAJ_G0018228.1 mouse_genomes_project 11 74147971 74148604 + Pik3r6 protein_coding processed_transcript MGP_CBAJ_T0029903.1 MGP_CBAJ_G0018318.1 mouse_genomes_project 11 76342002 76359173 - MGP_CBAJ_P0029903 Pelp1 protein_coding protein_coding MGP_CBAJ_T0029904.1 MGP_CBAJ_G0018318.1 mouse_genomes_project 11 76351771 76359176 - MGP_CBAJ_P0029904 Pelp1 protein_coding protein_coding MGP_CBAJ_T0012504.1 MGP_CBAJ_G0010616.1 mouse_genomes_project 11 76787180 76787601 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011672.1 MGP_CBAJ_G0009807.1 mouse_genomes_project 11 80278017 80281962 + MGP_CBAJ_P0011672 Olfr396-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0011673.1 MGP_CBAJ_G0009807.1 mouse_genomes_project 11 80281242 80281875 + MGP_CBAJ_P0011673 Olfr396-ps1 polymorphic_pseudogene protein_coding MGP_CBAJ_T0032449.1 MGP_CBAJ_G0018964.1 mouse_genomes_project 11 113617895 113641676 - MGP_CBAJ_P0032449 Gjc1 protein_coding protein_coding MGP_CBAJ_T0032450.1 MGP_CBAJ_G0018964.1 mouse_genomes_project 11 113617896 113642197 - MGP_CBAJ_P0032450 Gjc1 protein_coding protein_coding MGP_CBAJ_T0032451.1 MGP_CBAJ_G0018964.1 mouse_genomes_project 11 113617896 113623217 - MGP_CBAJ_P0032451 Gjc1 protein_coding protein_coding MGP_CBAJ_T0032452.1 MGP_CBAJ_G0018964.1 mouse_genomes_project 11 113619048 113624112 - Gjc1 protein_coding retained_intron MGP_CBAJ_T0032453.1 MGP_CBAJ_G0018964.1 mouse_genomes_project 11 113619493 113641707 - Gjc1 protein_coding processed_transcript MGP_CBAJ_T0003211.1 MGP_CBAJ_G0002969.1 mouse_genomes_project 11 107539280 107541304 + Gm11614 antisense antisense MGP_CBAJ_T0009535.1 MGP_CBAJ_G0007673.1 mouse_genomes_project 11 15439528 15439629 - Gm24714 miRNA miRNA MGP_CBAJ_T0003230.1 MGP_CBAJ_G0002983.1 mouse_genomes_project 11 112627616 112635769 + 4930417O22Rik antisense antisense MGP_CBAJ_T0033837.1 MGP_CBAJ_G0019250.1 mouse_genomes_project 11 134137580 134156282 - MGP_CBAJ_P0033837 Fasn protein_coding protein_coding MGP_CBAJ_T0033838.1 MGP_CBAJ_G0019250.1 mouse_genomes_project 11 134138839 134155830 - MGP_CBAJ_P0033838 Fasn protein_coding protein_coding MGP_CBAJ_T0033839.1 MGP_CBAJ_G0019250.1 mouse_genomes_project 11 134139281 134140340 - Fasn protein_coding retained_intron MGP_CBAJ_T0033840.1 MGP_CBAJ_G0019250.1 mouse_genomes_project 11 134140298 134141436 - Fasn protein_coding retained_intron MGP_CBAJ_T0033841.1 MGP_CBAJ_G0019250.1 mouse_genomes_project 11 134146229 134147190 - Fasn protein_coding retained_intron MGP_CBAJ_T0033842.1 MGP_CBAJ_G0019250.1 mouse_genomes_project 11 134154506 134155515 - MGP_CBAJ_P0033842 Fasn protein_coding protein_coding MGP_CBAJ_T0029167.1 MGP_CBAJ_G0018159.1 mouse_genomes_project 11 65748928 65773176 + MGP_CBAJ_P0029167 Tnfrsf13b protein_coding protein_coding MGP_CBAJ_T0029168.1 MGP_CBAJ_G0018159.1 mouse_genomes_project 11 65748931 65770675 + MGP_CBAJ_P0029168 Tnfrsf13b protein_coding protein_coding MGP_CBAJ_T0029169.1 MGP_CBAJ_G0018159.1 mouse_genomes_project 11 65748962 65770718 + MGP_CBAJ_P0029169 Tnfrsf13b protein_coding protein_coding MGP_CBAJ_T0029170.1 MGP_CBAJ_G0018159.1 mouse_genomes_project 11 65764664 65771446 + MGP_CBAJ_P0029170 Tnfrsf13b protein_coding protein_coding MGP_CBAJ_T0029171.1 MGP_CBAJ_G0018159.1 mouse_genomes_project 11 65766290 65771737 + Tnfrsf13b protein_coding processed_transcript MGP_CBAJ_T0029172.1 MGP_CBAJ_G0018159.1 mouse_genomes_project 11 65766328 65771610 + Tnfrsf13b protein_coding processed_transcript MGP_CBAJ_T0029173.1 MGP_CBAJ_G0018159.1 mouse_genomes_project 11 65766494 65771563 + Tnfrsf13b protein_coding processed_transcript MGP_CBAJ_T0031448.1 MGP_CBAJ_G0018702.1 mouse_genomes_project 11 104386702 104424241 - MGP_CBAJ_P0031448 Itga3 protein_coding protein_coding MGP_CBAJ_T0031449.1 MGP_CBAJ_G0018702.1 mouse_genomes_project 11 104386702 104424328 - MGP_CBAJ_P0031449 Itga3 protein_coding protein_coding MGP_CBAJ_T0031450.1 MGP_CBAJ_G0018702.1 mouse_genomes_project 11 104386703 104416762 - MGP_CBAJ_P0031450 Itga3 protein_coding protein_coding MGP_CBAJ_T0031451.1 MGP_CBAJ_G0018702.1 mouse_genomes_project 11 104398590 104401383 - Itga3 protein_coding retained_intron MGP_CBAJ_T0031452.1 MGP_CBAJ_G0018702.1 mouse_genomes_project 11 104403458 104407397 - Itga3 protein_coding retained_intron MGP_CBAJ_T0031453.1 MGP_CBAJ_G0018702.1 mouse_genomes_project 11 104408285 104424324 - MGP_CBAJ_P0031453 Itga3 protein_coding protein_coding MGP_CBAJ_T0028055.1 MGP_CBAJ_G0017840.1 mouse_genomes_project 11 30050793 30374679 - MGP_CBAJ_P0028055 Eml6 protein_coding protein_coding MGP_CBAJ_T0028056.1 MGP_CBAJ_G0017840.1 mouse_genomes_project 11 30051879 30071835 - Eml6 protein_coding retained_intron MGP_CBAJ_T0028057.1 MGP_CBAJ_G0017840.1 mouse_genomes_project 11 30054395 30059212 - Eml6 protein_coding retained_intron MGP_CBAJ_T0028058.1 MGP_CBAJ_G0017840.1 mouse_genomes_project 11 30055210 30057265 - Eml6 protein_coding retained_intron MGP_CBAJ_T0028059.1 MGP_CBAJ_G0017840.1 mouse_genomes_project 11 30057702 30067848 - MGP_CBAJ_P0028059 Eml6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028060.1 MGP_CBAJ_G0017840.1 mouse_genomes_project 11 30109654 30110765 - Eml6 protein_coding retained_intron MGP_CBAJ_T0028061.1 MGP_CBAJ_G0017840.1 mouse_genomes_project 11 30116983 30129289 - MGP_CBAJ_P0028061 Eml6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031146.1 MGP_CBAJ_G0018631.1 mouse_genomes_project 11 95751299 95775147 + MGP_CBAJ_P0031146 Sept4 protein_coding protein_coding MGP_CBAJ_T0031147.1 MGP_CBAJ_G0018631.1 mouse_genomes_project 11 95760963 95780581 + MGP_CBAJ_P0031147 Sept4 protein_coding protein_coding MGP_CBAJ_T0031148.1 MGP_CBAJ_G0018631.1 mouse_genomes_project 11 95760974 95779228 + Sept4 protein_coding retained_intron MGP_CBAJ_T0031149.1 MGP_CBAJ_G0018631.1 mouse_genomes_project 11 95760986 95780579 + MGP_CBAJ_P0031149 Sept4 protein_coding protein_coding MGP_CBAJ_T0031150.1 MGP_CBAJ_G0018631.1 mouse_genomes_project 11 95761009 95780581 + Sept4 protein_coding retained_intron MGP_CBAJ_T0031151.1 MGP_CBAJ_G0018631.1 mouse_genomes_project 11 95761018 95775937 + Sept4 protein_coding retained_intron MGP_CBAJ_T0031152.1 MGP_CBAJ_G0018631.1 mouse_genomes_project 11 95761032 95780581 + Sept4 protein_coding retained_intron MGP_CBAJ_T0031153.1 MGP_CBAJ_G0018631.1 mouse_genomes_project 11 95761046 95775765 + Sept4 protein_coding retained_intron MGP_CBAJ_T0031154.1 MGP_CBAJ_G0018631.1 mouse_genomes_project 11 95761490 95779316 + MGP_CBAJ_P0031154 Sept4 protein_coding protein_coding MGP_CBAJ_T0031155.1 MGP_CBAJ_G0018631.1 mouse_genomes_project 11 95767870 95780581 + MGP_CBAJ_P0031155 Sept4 protein_coding protein_coding MGP_CBAJ_T0031156.1 MGP_CBAJ_G0018631.1 mouse_genomes_project 11 95767890 95780417 + MGP_CBAJ_P0031156 Sept4 protein_coding protein_coding MGP_CBAJ_T0031157.1 MGP_CBAJ_G0018631.1 mouse_genomes_project 11 95767890 95780581 + MGP_CBAJ_P0031157 Sept4 protein_coding protein_coding MGP_CBAJ_T0031158.1 MGP_CBAJ_G0018631.1 mouse_genomes_project 11 95767898 95775937 + Sept4 protein_coding retained_intron MGP_CBAJ_T0031159.1 MGP_CBAJ_G0018631.1 mouse_genomes_project 11 95767903 95780581 + Sept4 protein_coding retained_intron MGP_CBAJ_T0031160.1 MGP_CBAJ_G0018631.1 mouse_genomes_project 11 95769038 95779083 + MGP_CBAJ_P0031160 Sept4 protein_coding protein_coding MGP_CBAJ_T0031161.1 MGP_CBAJ_G0018631.1 mouse_genomes_project 11 95775130 95779906 + Sept4 protein_coding retained_intron MGP_CBAJ_T0031162.1 MGP_CBAJ_G0018631.1 mouse_genomes_project 11 95778367 95780587 + MGP_CBAJ_P0031162 Sept4 protein_coding unknown_likely_coding MGP_CBAJ_T0031163.1 MGP_CBAJ_G0018631.1 mouse_genomes_project 11 95778909 95780036 + Sept4 protein_coding retained_intron MGP_CBAJ_T0031164.1 MGP_CBAJ_G0018631.1 mouse_genomes_project 11 95779518 95780581 + Sept4 protein_coding processed_transcript MGP_CBAJ_T0029524.1 MGP_CBAJ_G0018236.1 mouse_genomes_project 11 74632082 74643936 - MGP_CBAJ_P0029524 Arhgef15 protein_coding protein_coding MGP_CBAJ_T0029525.1 MGP_CBAJ_G0018236.1 mouse_genomes_project 11 74632084 74646329 - MGP_CBAJ_P0029525 Arhgef15 protein_coding protein_coding MGP_CBAJ_T0029526.1 MGP_CBAJ_G0018236.1 mouse_genomes_project 11 74633454 74636308 - Arhgef15 protein_coding processed_transcript MGP_CBAJ_T0029527.1 MGP_CBAJ_G0018236.1 mouse_genomes_project 11 74635228 74636681 - Arhgef15 protein_coding processed_transcript MGP_CBAJ_T0029528.1 MGP_CBAJ_G0018236.1 mouse_genomes_project 11 74635374 74636521 - Arhgef15 protein_coding processed_transcript MGP_CBAJ_T0029529.1 MGP_CBAJ_G0018236.1 mouse_genomes_project 11 74637091 74641036 - Arhgef15 protein_coding retained_intron MGP_CBAJ_T0029257.1 MGP_CBAJ_G0018175.1 mouse_genomes_project 11 66595660 66659543 - MGP_CBAJ_P0029257 Akap10 protein_coding protein_coding MGP_CBAJ_T0029258.1 MGP_CBAJ_G0018175.1 mouse_genomes_project 11 66596025 66605604 - Akap10 protein_coding processed_transcript MGP_CBAJ_T0029259.1 MGP_CBAJ_G0018175.1 mouse_genomes_project 11 66597369 66659301 - MGP_CBAJ_P0029259 Akap10 protein_coding protein_coding MGP_CBAJ_T0029260.1 MGP_CBAJ_G0018175.1 mouse_genomes_project 11 66618844 66659517 - MGP_CBAJ_P0029260 Akap10 protein_coding protein_coding MGP_CBAJ_T0029261.1 MGP_CBAJ_G0018175.1 mouse_genomes_project 11 66651212 66659498 - Akap10 protein_coding processed_transcript MGP_CBAJ_T0032926.1 MGP_CBAJ_G0019071.1 mouse_genomes_project 11 125933270 125949147 + MGP_CBAJ_P0032926 protein_coding protein_coding MGP_CBAJ_T0032927.1 MGP_CBAJ_G0019071.1 mouse_genomes_project 11 125933504 125948136 + MGP_CBAJ_P0032927 protein_coding unknown_likely_coding MGP_CBAJ_T0032928.1 MGP_CBAJ_G0019071.1 mouse_genomes_project 11 125939299 125940862 + protein_coding retained_intron MGP_CBAJ_T0032929.1 MGP_CBAJ_G0019071.1 mouse_genomes_project 11 125941988 125953980 + MGP_CBAJ_P0032929 protein_coding protein_coding MGP_CBAJ_T0032930.1 MGP_CBAJ_G0019071.1 mouse_genomes_project 11 125942125 125948390 + MGP_CBAJ_P0032930 protein_coding protein_coding MGP_CBAJ_T0032931.1 MGP_CBAJ_G0019071.1 mouse_genomes_project 11 125942143 125948426 + MGP_CBAJ_P0032931 protein_coding protein_coding MGP_CBAJ_T0032932.1 MGP_CBAJ_G0019071.1 mouse_genomes_project 11 125943197 125949147 + MGP_CBAJ_P0032932 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032933.1 MGP_CBAJ_G0019071.1 mouse_genomes_project 11 125943907 125949147 + MGP_CBAJ_P0032933 protein_coding protein_coding MGP_CBAJ_T0030293.1 MGP_CBAJ_G0018423.1 mouse_genomes_project 11 81360646 81406930 - MGP_CBAJ_P0030293 Sgsm2 protein_coding protein_coding MGP_CBAJ_T0030294.1 MGP_CBAJ_G0018423.1 mouse_genomes_project 11 81360651 81406930 - MGP_CBAJ_P0030294 Sgsm2 protein_coding protein_coding MGP_CBAJ_T0030295.1 MGP_CBAJ_G0018423.1 mouse_genomes_project 11 81370819 81374797 - Sgsm2 protein_coding retained_intron MGP_CBAJ_T0030296.1 MGP_CBAJ_G0018423.1 mouse_genomes_project 11 81381688 81383352 - Sgsm2 protein_coding retained_intron MGP_CBAJ_T0030297.1 MGP_CBAJ_G0018423.1 mouse_genomes_project 11 81381698 81382648 - Sgsm2 protein_coding retained_intron MGP_CBAJ_T0017035.1 MGP_CBAJ_G0014965.1 mouse_genomes_project 11 133477400 133479184 - 2900052L18Rik processed_transcript processed_transcript MGP_CBAJ_T0012494.1 MGP_CBAJ_G0010606.1 mouse_genomes_project 11 73638128 73638513 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0028148.1 MGP_CBAJ_G0017859.1 mouse_genomes_project 11 32983015 32984803 + MGP_CBAJ_P0028148 Hba-x protein_coding protein_coding MGP_CBAJ_T0028149.1 MGP_CBAJ_G0017859.1 mouse_genomes_project 11 32983508 32984803 + MGP_CBAJ_P0028149 Hba-x protein_coding protein_coding MGP_CBAJ_T0009605.1 MGP_CBAJ_G0007743.1 mouse_genomes_project 11 90600533 90600596 - Mir7679 miRNA miRNA MGP_CBAJ_T0029005.1 MGP_CBAJ_G0018119.1 mouse_genomes_project 11 63554187 63556606 + MGP_CBAJ_P0029005 2310033P09Rik protein_coding protein_coding MGP_CBAJ_T0029530.1 MGP_CBAJ_G0018237.1 mouse_genomes_project 11 74660097 74665381 + MGP_CBAJ_P0029530 Slc25a35 protein_coding protein_coding MGP_CBAJ_T0029531.1 MGP_CBAJ_G0018237.1 mouse_genomes_project 11 74660113 74663698 + Slc25a35 protein_coding processed_transcript MGP_CBAJ_T0029532.1 MGP_CBAJ_G0018237.1 mouse_genomes_project 11 74660114 74667230 + MGP_CBAJ_P0029532 Slc25a35 protein_coding protein_coding MGP_CBAJ_T0027897.1 MGP_CBAJ_G0017809.1 mouse_genomes_project 11 22344739 22372702 - MGP_CBAJ_P0027897 B3gnt2 protein_coding protein_coding MGP_CBAJ_T0027898.1 MGP_CBAJ_G0017809.1 mouse_genomes_project 11 22344857 22373089 - MGP_CBAJ_P0027898 B3gnt2 protein_coding protein_coding MGP_CBAJ_T0027899.1 MGP_CBAJ_G0017809.1 mouse_genomes_project 11 22346575 22373636 - MGP_CBAJ_P0027899 B3gnt2 protein_coding protein_coding MGP_CBAJ_T0009601.1 MGP_CBAJ_G0007739.1 mouse_genomes_project 11 85193992 85194053 + Mir7653 miRNA miRNA MGP_CBAJ_T0029632.1 MGP_CBAJ_G0018256.1 mouse_genomes_project 11 75118773 75124127 + MGP_CBAJ_P0029632 Gm17305 protein_coding protein_coding MGP_CBAJ_T0032982.1 MGP_CBAJ_G0019082.1 mouse_genomes_project 11 127191727 127203179 + MGP_CBAJ_P0032982 Gpr142 protein_coding protein_coding MGP_CBAJ_T0032983.1 MGP_CBAJ_G0019082.1 mouse_genomes_project 11 127191727 127203179 + MGP_CBAJ_P0032983 Gpr142 protein_coding protein_coding MGP_CBAJ_T0012347.1 MGP_CBAJ_G0010459.1 mouse_genomes_project 11 15435727 15436640 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017032.1 MGP_CBAJ_G0014963.1 mouse_genomes_project 11 133376677 133378459 + Gm11769 processed_transcript processed_transcript MGP_CBAJ_T0003096.1 MGP_CBAJ_G0002877.1 mouse_genomes_project 11 58511171 58517245 + Gm12227 antisense antisense MGP_CBAJ_T0012573.1 MGP_CBAJ_G0010685.1 mouse_genomes_project 11 110004993 110005161 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012468.1 MGP_CBAJ_G0010580.1 mouse_genomes_project 11 62391129 62392403 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006166.1 MGP_CBAJ_G0005146.1 mouse_genomes_project 11 69178794 69196423 + Gm12290 lincRNA lincRNA MGP_CBAJ_T0031663.1 MGP_CBAJ_G0018759.1 mouse_genomes_project 11 107281099 107358445 - MGP_CBAJ_P0031663 Srcin1 protein_coding protein_coding MGP_CBAJ_T0031664.1 MGP_CBAJ_G0018759.1 mouse_genomes_project 11 107284617 107357283 - MGP_CBAJ_P0031664 Srcin1 protein_coding protein_coding MGP_CBAJ_T0031665.1 MGP_CBAJ_G0018759.1 mouse_genomes_project 11 107284691 107357149 - MGP_CBAJ_P0031665 Srcin1 protein_coding unknown_likely_coding MGP_CBAJ_T0031666.1 MGP_CBAJ_G0018759.1 mouse_genomes_project 11 107289369 107357174 - MGP_CBAJ_P0031666 Srcin1 protein_coding protein_coding MGP_CBAJ_T0031667.1 MGP_CBAJ_G0018759.1 mouse_genomes_project 11 107309234 107357159 - MGP_CBAJ_P0031667 Srcin1 protein_coding protein_coding MGP_CBAJ_T0031668.1 MGP_CBAJ_G0018759.1 mouse_genomes_project 11 107328995 107358458 - Srcin1 protein_coding processed_transcript MGP_CBAJ_T0030414.1 MGP_CBAJ_G0018450.1 mouse_genomes_project 11 82732398 82895953 - MGP_CBAJ_P0030414 Vps53 protein_coding protein_coding MGP_CBAJ_T0030415.1 MGP_CBAJ_G0018450.1 mouse_genomes_project 11 82732468 82895930 - MGP_CBAJ_P0030415 Vps53 protein_coding protein_coding MGP_CBAJ_T0030416.1 MGP_CBAJ_G0018450.1 mouse_genomes_project 11 82732469 82895923 - MGP_CBAJ_P0030416 Vps53 protein_coding protein_coding MGP_CBAJ_T0030417.1 MGP_CBAJ_G0018450.1 mouse_genomes_project 11 82750512 82781437 - Vps53 protein_coding retained_intron MGP_CBAJ_T0030418.1 MGP_CBAJ_G0018450.1 mouse_genomes_project 11 82751451 82895805 - MGP_CBAJ_P0030418 Vps53 protein_coding protein_coding MGP_CBAJ_T0030419.1 MGP_CBAJ_G0018450.1 mouse_genomes_project 11 82751456 82895805 - MGP_CBAJ_P0030419 Vps53 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030420.1 MGP_CBAJ_G0018450.1 mouse_genomes_project 11 82751456 82895822 - MGP_CBAJ_P0030420 Vps53 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030421.1 MGP_CBAJ_G0018450.1 mouse_genomes_project 11 82807357 82895838 - MGP_CBAJ_P0030421 Vps53 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030422.1 MGP_CBAJ_G0018450.1 mouse_genomes_project 11 82807972 82882507 - MGP_CBAJ_P0030422 Vps53 protein_coding protein_coding MGP_CBAJ_T0030424.1 MGP_CBAJ_G0018450.1 mouse_genomes_project 11 82811772 82895893 - Vps53 protein_coding retained_intron MGP_CBAJ_T0030425.1 MGP_CBAJ_G0018450.1 mouse_genomes_project 11 82811888 82892078 - Vps53 protein_coding processed_transcript MGP_CBAJ_T0030426.1 MGP_CBAJ_G0018450.1 mouse_genomes_project 11 82811893 82830694 - Vps53 protein_coding processed_transcript MGP_CBAJ_T0030427.1 MGP_CBAJ_G0018450.1 mouse_genomes_project 11 82826412 82868808 - Vps53 protein_coding processed_transcript MGP_CBAJ_T0030428.1 MGP_CBAJ_G0018450.1 mouse_genomes_project 11 82828188 82895940 - MGP_CBAJ_P0030428 Vps53 protein_coding protein_coding MGP_CBAJ_T0030429.1 MGP_CBAJ_G0018450.1 mouse_genomes_project 11 82886762 82895918 - Vps53 protein_coding processed_transcript MGP_CBAJ_T0030430.1 MGP_CBAJ_G0018450.1 mouse_genomes_project 11 82893248 82895944 - MGP_CBAJ_P0030430 Vps53 protein_coding protein_coding MGP_CBAJ_T0030668.1 MGP_CBAJ_G0018500.1 mouse_genomes_project 11 85395160 85400848 + MGP_CBAJ_P0030668 Unc119 protein_coding protein_coding MGP_CBAJ_T0030669.1 MGP_CBAJ_G0018500.1 mouse_genomes_project 11 85395176 85399533 + Unc119 protein_coding retained_intron MGP_CBAJ_T0030670.1 MGP_CBAJ_G0018500.1 mouse_genomes_project 11 85395184 85400848 + MGP_CBAJ_P0030670 Unc119 protein_coding protein_coding MGP_CBAJ_T0030671.1 MGP_CBAJ_G0018500.1 mouse_genomes_project 11 85395223 85400580 + Unc119 protein_coding retained_intron MGP_CBAJ_T0030672.1 MGP_CBAJ_G0018500.1 mouse_genomes_project 11 85398349 85400663 + MGP_CBAJ_P0030672 Unc119 protein_coding protein_coding MGP_CBAJ_T0030673.1 MGP_CBAJ_G0018500.1 mouse_genomes_project 11 85398594 85399803 + Unc119 protein_coding retained_intron MGP_CBAJ_T0030674.1 MGP_CBAJ_G0018500.1 mouse_genomes_project 11 85399618 85400682 + Unc119 protein_coding retained_intron MGP_CBAJ_T0003069.1 MGP_CBAJ_G0002852.1 mouse_genomes_project 11 35342699 35351103 + 4930403D09Rik antisense antisense MGP_CBAJ_T0031924.1 MGP_CBAJ_G0018839.1 mouse_genomes_project 11 109878394 109880112 - MGP_CBAJ_P0031924 Gm11563 protein_coding protein_coding MGP_CBAJ_T0032060.1 MGP_CBAJ_G0018892.1 mouse_genomes_project 11 111312273 111346717 + MGP_CBAJ_P0032060 Stat5a protein_coding protein_coding MGP_CBAJ_T0032061.1 MGP_CBAJ_G0018892.1 mouse_genomes_project 11 111312332 111316174 + MGP_CBAJ_P0032061 Stat5a protein_coding protein_coding MGP_CBAJ_T0032062.1 MGP_CBAJ_G0018892.1 mouse_genomes_project 11 111312578 111346717 + MGP_CBAJ_P0032062 Stat5a protein_coding protein_coding MGP_CBAJ_T0032063.1 MGP_CBAJ_G0018892.1 mouse_genomes_project 11 111314771 111317647 + MGP_CBAJ_P0032063 Stat5a protein_coding protein_coding MGP_CBAJ_T0032064.1 MGP_CBAJ_G0018892.1 mouse_genomes_project 11 111314910 111346716 + MGP_CBAJ_P0032064 Stat5a protein_coding protein_coding MGP_CBAJ_T0032065.1 MGP_CBAJ_G0018892.1 mouse_genomes_project 11 111314911 111338846 + Stat5a protein_coding processed_transcript MGP_CBAJ_T0032066.1 MGP_CBAJ_G0018892.1 mouse_genomes_project 11 111340558 111341647 + Stat5a protein_coding processed_transcript MGP_CBAJ_T0028768.1 MGP_CBAJ_G0018037.1 mouse_genomes_project 11 57832118 57847846 + MGP_CBAJ_P0028768 P4ha2 protein_coding protein_coding MGP_CBAJ_T0028769.1 MGP_CBAJ_G0018037.1 mouse_genomes_project 11 57832947 57866375 + MGP_CBAJ_P0028769 P4ha2 protein_coding protein_coding MGP_CBAJ_T0028770.1 MGP_CBAJ_G0018037.1 mouse_genomes_project 11 57832986 57862485 + P4ha2 protein_coding retained_intron MGP_CBAJ_T0028771.1 MGP_CBAJ_G0018037.1 mouse_genomes_project 11 57832986 57866375 + MGP_CBAJ_P0028771 P4ha2 protein_coding protein_coding MGP_CBAJ_T0028772.1 MGP_CBAJ_G0018037.1 mouse_genomes_project 11 57832998 57845297 + P4ha2 protein_coding retained_intron MGP_CBAJ_T0028773.1 MGP_CBAJ_G0018037.1 mouse_genomes_project 11 57832998 57866385 + MGP_CBAJ_P0028773 P4ha2 protein_coding protein_coding MGP_CBAJ_T0028774.1 MGP_CBAJ_G0018037.1 mouse_genomes_project 11 57833003 57843976 + MGP_CBAJ_P0028774 P4ha2 protein_coding protein_coding MGP_CBAJ_T0028775.1 MGP_CBAJ_G0018037.1 mouse_genomes_project 11 57833014 57845225 + MGP_CBAJ_P0028775 P4ha2 protein_coding protein_coding MGP_CBAJ_T0028776.1 MGP_CBAJ_G0018037.1 mouse_genomes_project 11 57833091 57845236 + MGP_CBAJ_P0028776 P4ha2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028777.1 MGP_CBAJ_G0018037.1 mouse_genomes_project 11 57833268 57845236 + MGP_CBAJ_P0028777 P4ha2 protein_coding protein_coding MGP_CBAJ_T0028778.1 MGP_CBAJ_G0018037.1 mouse_genomes_project 11 57840981 57847936 + MGP_CBAJ_P0028778 P4ha2 protein_coding protein_coding MGP_CBAJ_T0028779.1 MGP_CBAJ_G0018037.1 mouse_genomes_project 11 57844682 57853908 + MGP_CBAJ_P0028779 P4ha2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028780.1 MGP_CBAJ_G0018037.1 mouse_genomes_project 11 57846864 57847936 + P4ha2 protein_coding processed_transcript MGP_CBAJ_T0028781.1 MGP_CBAJ_G0018037.1 mouse_genomes_project 11 57859395 57860785 + P4ha2 protein_coding retained_intron MGP_CBAJ_T0028782.1 MGP_CBAJ_G0018037.1 mouse_genomes_project 11 57862415 57866388 + P4ha2 protein_coding retained_intron MGP_CBAJ_T0006183.1 MGP_CBAJ_G0005159.1 mouse_genomes_project 11 77839037 77840107 - Gm12326 lincRNA lincRNA MGP_CBAJ_T0006184.1 MGP_CBAJ_G0005159.1 mouse_genomes_project 11 77839651 77840088 - Gm12326 lincRNA lincRNA MGP_CBAJ_T0028877.1 MGP_CBAJ_G0018063.1 mouse_genomes_project 11 61607229 61624927 + MGP_CBAJ_P0028877 Mfap3 protein_coding protein_coding MGP_CBAJ_T0028878.1 MGP_CBAJ_G0018063.1 mouse_genomes_project 11 61607251 61620074 + Mfap3 protein_coding retained_intron MGP_CBAJ_T0028879.1 MGP_CBAJ_G0018063.1 mouse_genomes_project 11 61607252 61624926 + MGP_CBAJ_P0028879 Mfap3 protein_coding protein_coding MGP_CBAJ_T0028880.1 MGP_CBAJ_G0018063.1 mouse_genomes_project 11 61611555 61620650 + MGP_CBAJ_P0028880 Mfap3 protein_coding protein_coding MGP_CBAJ_T0016920.1 MGP_CBAJ_G0014900.1 mouse_genomes_project 11 23165028 23165818 - Gm12060 processed_transcript processed_transcript MGP_CBAJ_T0027520.1 MGP_CBAJ_G0017720.1 mouse_genomes_project 11 2249200 2285538 + MGP_CBAJ_P0027520 Thoc5 protein_coding protein_coding MGP_CBAJ_T0027521.1 MGP_CBAJ_G0017720.1 mouse_genomes_project 11 2249223 2285536 + MGP_CBAJ_P0027521 Thoc5 protein_coding protein_coding MGP_CBAJ_T0027522.1 MGP_CBAJ_G0017720.1 mouse_genomes_project 11 2255831 2258085 + Thoc5 protein_coding processed_transcript MGP_CBAJ_T0027523.1 MGP_CBAJ_G0017720.1 mouse_genomes_project 11 2255831 2268083 + Thoc5 protein_coding processed_transcript MGP_CBAJ_T0027524.1 MGP_CBAJ_G0017720.1 mouse_genomes_project 11 2255831 2274896 + MGP_CBAJ_P0027524 Thoc5 protein_coding protein_coding MGP_CBAJ_T0027525.1 MGP_CBAJ_G0017720.1 mouse_genomes_project 11 2271976 2277156 + Thoc5 protein_coding processed_transcript MGP_CBAJ_T0028458.1 MGP_CBAJ_G0017952.1 mouse_genomes_project 11 52304415 52305488 + MGP_CBAJ_P0028458 Olfr1389 protein_coding protein_coding MGP_CBAJ_T0028838.1 MGP_CBAJ_G0018049.1 mouse_genomes_project 11 58810005 58864833 - MGP_CBAJ_P0028838 Anxa6 protein_coding protein_coding MGP_CBAJ_T0028839.1 MGP_CBAJ_G0018049.1 mouse_genomes_project 11 58810005 58864833 - MGP_CBAJ_P0028839 Anxa6 protein_coding protein_coding MGP_CBAJ_T0028840.1 MGP_CBAJ_G0018049.1 mouse_genomes_project 11 58822071 58864803 - Anxa6 protein_coding processed_transcript MGP_CBAJ_T0006157.1 MGP_CBAJ_G0005138.1 mouse_genomes_project 11 64596975 64600062 - 4930412M03Rik lincRNA lincRNA MGP_CBAJ_T0012471.1 MGP_CBAJ_G0010583.1 mouse_genomes_project 11 62976100 62977116 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006087.1 MGP_CBAJ_G0005076.1 mouse_genomes_project 11 17358137 17386348 - Gm12022 lincRNA lincRNA MGP_CBAJ_T0098258.1 MGP_CBAJ_G0036530.1 mouse_genomes_project 11 36461954 36462671 + Gm12122 sense_intronic sense_intronic MGP_CBAJ_T0031347.1 MGP_CBAJ_G0018679.1 mouse_genomes_project 11 103483959 103520081 - MGP_CBAJ_P0031347 Luc7l3 protein_coding protein_coding MGP_CBAJ_T0031348.1 MGP_CBAJ_G0018679.1 mouse_genomes_project 11 103487160 103520111 - MGP_CBAJ_P0031348 Luc7l3 protein_coding protein_coding MGP_CBAJ_T0031349.1 MGP_CBAJ_G0018679.1 mouse_genomes_project 11 103487160 103493134 - MGP_CBAJ_P0031349 Luc7l3 protein_coding protein_coding MGP_CBAJ_T0031350.1 MGP_CBAJ_G0018679.1 mouse_genomes_project 11 103487238 103520111 - MGP_CBAJ_P0031350 Luc7l3 protein_coding protein_coding MGP_CBAJ_T0031351.1 MGP_CBAJ_G0018679.1 mouse_genomes_project 11 103487238 103520111 - MGP_CBAJ_P0031351 Luc7l3 protein_coding protein_coding MGP_CBAJ_T0031352.1 MGP_CBAJ_G0018679.1 mouse_genomes_project 11 103487428 103489322 - MGP_CBAJ_P0031352 Luc7l3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031353.1 MGP_CBAJ_G0018679.1 mouse_genomes_project 11 103488872 103520018 - MGP_CBAJ_P0031353 Luc7l3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031354.1 MGP_CBAJ_G0018679.1 mouse_genomes_project 11 103493073 103494291 - Luc7l3 protein_coding retained_intron MGP_CBAJ_T0031355.1 MGP_CBAJ_G0018679.1 mouse_genomes_project 11 103493081 103495122 - Luc7l3 protein_coding processed_transcript MGP_CBAJ_T0031356.1 MGP_CBAJ_G0018679.1 mouse_genomes_project 11 103493122 103498596 - Luc7l3 protein_coding retained_intron MGP_CBAJ_T0003231.1 MGP_CBAJ_G0002984.1 mouse_genomes_project 11 112649522 112650239 + Gm20659 antisense antisense MGP_CBAJ_T0031920.1 MGP_CBAJ_G0018835.1 mouse_genomes_project 11 109840958 109841973 - MGP_CBAJ_P0031920 Krtap4-1 protein_coding protein_coding MGP_CBAJ_T0033509.1 MGP_CBAJ_G0019189.1 mouse_genomes_project 11 131476434 131491154 + MGP_CBAJ_P0033509 Engase protein_coding protein_coding MGP_CBAJ_T0033510.1 MGP_CBAJ_G0019189.1 mouse_genomes_project 11 131476546 131478859 + MGP_CBAJ_P0033510 Engase protein_coding nonsense_mediated_decay MGP_CBAJ_T0033511.1 MGP_CBAJ_G0019189.1 mouse_genomes_project 11 131476551 131485009 + MGP_CBAJ_P0033511 Engase protein_coding nonsense_mediated_decay MGP_CBAJ_T0033512.1 MGP_CBAJ_G0019189.1 mouse_genomes_project 11 131476565 131491032 + MGP_CBAJ_P0033512 Engase protein_coding nonsense_mediated_decay MGP_CBAJ_T0033513.1 MGP_CBAJ_G0019189.1 mouse_genomes_project 11 131476577 131489718 + MGP_CBAJ_P0033513 Engase protein_coding nonsense_mediated_decay MGP_CBAJ_T0033514.1 MGP_CBAJ_G0019189.1 mouse_genomes_project 11 131476588 131491154 + MGP_CBAJ_P0033514 Engase protein_coding nonsense_mediated_decay MGP_CBAJ_T0033515.1 MGP_CBAJ_G0019189.1 mouse_genomes_project 11 131483066 131484891 + Engase protein_coding retained_intron MGP_CBAJ_T0033516.1 MGP_CBAJ_G0019189.1 mouse_genomes_project 11 131484333 131489718 + Engase protein_coding retained_intron MGP_CBAJ_T0033517.1 MGP_CBAJ_G0019189.1 mouse_genomes_project 11 131486434 131489454 + MGP_CBAJ_P0033517 Engase protein_coding protein_coding MGP_CBAJ_T0031650.1 MGP_CBAJ_G0018754.1 mouse_genomes_project 11 107071037 107085522 + MGP_CBAJ_P0031650 Mrpl45 protein_coding protein_coding MGP_CBAJ_T0031651.1 MGP_CBAJ_G0018754.1 mouse_genomes_project 11 107071229 107076760 + MGP_CBAJ_P0031651 Mrpl45 protein_coding protein_coding MGP_CBAJ_T0098730.1 MGP_CBAJ_G0036985.1 mouse_genomes_project 11 113313256 113313360 - Gm25337 snRNA snRNA MGP_CBAJ_T0003075.1 MGP_CBAJ_G0002858.1 mouse_genomes_project 11 45662400 45666795 - antisense antisense MGP_CBAJ_T0031329.1 MGP_CBAJ_G0018675.1 mouse_genomes_project 11 103133591 103182797 + Spag9 protein_coding processed_transcript MGP_CBAJ_T0031330.1 MGP_CBAJ_G0018675.1 mouse_genomes_project 11 103133603 103189821 + Spag9 protein_coding processed_transcript MGP_CBAJ_T0031331.1 MGP_CBAJ_G0018675.1 mouse_genomes_project 11 103133603 103281234 + MGP_CBAJ_P0031331 Spag9 protein_coding protein_coding MGP_CBAJ_T0031332.1 MGP_CBAJ_G0018675.1 mouse_genomes_project 11 103182738 103247454 + MGP_CBAJ_P0031332 Spag9 protein_coding protein_coding MGP_CBAJ_T0031333.1 MGP_CBAJ_G0018675.1 mouse_genomes_project 11 103183286 103256383 + MGP_CBAJ_P0031333 Spag9 protein_coding protein_coding MGP_CBAJ_T0031334.1 MGP_CBAJ_G0018675.1 mouse_genomes_project 11 103183358 103202178 + Spag9 protein_coding processed_transcript MGP_CBAJ_T0031335.1 MGP_CBAJ_G0018675.1 mouse_genomes_project 11 103183373 103281229 + MGP_CBAJ_P0031335 Spag9 protein_coding protein_coding MGP_CBAJ_T0031336.1 MGP_CBAJ_G0018675.1 mouse_genomes_project 11 103183373 103281229 + MGP_CBAJ_P0031336 Spag9 protein_coding protein_coding MGP_CBAJ_T0031337.1 MGP_CBAJ_G0018675.1 mouse_genomes_project 11 103183436 103281234 + MGP_CBAJ_P0031337 Spag9 protein_coding protein_coding MGP_CBAJ_T0031338.1 MGP_CBAJ_G0018675.1 mouse_genomes_project 11 103183533 103281232 + MGP_CBAJ_P0031338 Spag9 protein_coding protein_coding MGP_CBAJ_T0031339.1 MGP_CBAJ_G0018675.1 mouse_genomes_project 11 103212261 103281235 + MGP_CBAJ_P0031339 Spag9 protein_coding protein_coding MGP_CBAJ_T0031340.1 MGP_CBAJ_G0018675.1 mouse_genomes_project 11 103212355 103243822 + Spag9 protein_coding processed_transcript MGP_CBAJ_T0030487.1 MGP_CBAJ_G0018465.1 mouse_genomes_project 11 83810984 83848978 + MGP_CBAJ_P0030487 protein_coding unknown_likely_coding MGP_CBAJ_T0030488.1 MGP_CBAJ_G0018465.1 mouse_genomes_project 11 83823299 83827071 + MGP_CBAJ_P0030488 protein_coding protein_coding MGP_CBAJ_T0030489.1 MGP_CBAJ_G0018465.1 mouse_genomes_project 11 83832156 83836220 + protein_coding retained_intron MGP_CBAJ_T0003223.1 MGP_CBAJ_G0002976.1 mouse_genomes_project 11 110646231 110658804 - Gm14206 antisense antisense MGP_CBAJ_T0032883.1 MGP_CBAJ_G0019061.1 mouse_genomes_project 11 121882411 121964401 - MGP_CBAJ_P0032883 protein_coding protein_coding MGP_CBAJ_T0032884.1 MGP_CBAJ_G0019061.1 mouse_genomes_project 11 121882413 121964360 - MGP_CBAJ_P0032884 protein_coding protein_coding MGP_CBAJ_T0032885.1 MGP_CBAJ_G0019061.1 mouse_genomes_project 11 121882413 121964360 - MGP_CBAJ_P0032885 protein_coding protein_coding MGP_CBAJ_T0032886.1 MGP_CBAJ_G0019061.1 mouse_genomes_project 11 121883625 121886859 - protein_coding processed_transcript MGP_CBAJ_T0032887.1 MGP_CBAJ_G0019061.1 mouse_genomes_project 11 121927176 121929677 - protein_coding processed_transcript MGP_CBAJ_T0032888.1 MGP_CBAJ_G0019061.1 mouse_genomes_project 11 121936576 121938161 - protein_coding processed_transcript MGP_CBAJ_T0032889.1 MGP_CBAJ_G0019061.1 mouse_genomes_project 11 121938094 121943439 - MGP_CBAJ_P0032889 protein_coding protein_coding MGP_CBAJ_T0032890.1 MGP_CBAJ_G0019061.1 mouse_genomes_project 11 121951945 121964360 - MGP_CBAJ_P0032890 protein_coding protein_coding MGP_CBAJ_T0030696.1 MGP_CBAJ_G0018509.1 mouse_genomes_project 11 85609433 85624526 + MGP_CBAJ_P0030696 Poldip2 protein_coding protein_coding MGP_CBAJ_T0030697.1 MGP_CBAJ_G0018509.1 mouse_genomes_project 11 85611725 85613353 + Poldip2 protein_coding processed_transcript MGP_CBAJ_T0030698.1 MGP_CBAJ_G0018509.1 mouse_genomes_project 11 85611753 85623961 + MGP_CBAJ_P0030698 Poldip2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030699.1 MGP_CBAJ_G0018509.1 mouse_genomes_project 11 85615601 85619724 + Poldip2 protein_coding retained_intron MGP_CBAJ_T0030700.1 MGP_CBAJ_G0018509.1 mouse_genomes_project 11 85616191 85620377 + Poldip2 protein_coding retained_intron MGP_CBAJ_T0030701.1 MGP_CBAJ_G0018509.1 mouse_genomes_project 11 85620122 85621053 + Poldip2 protein_coding retained_intron MGP_CBAJ_T0012533.1 MGP_CBAJ_G0010645.1 mouse_genomes_project 11 87142788 87143529 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012525.1 MGP_CBAJ_G0010637.1 mouse_genomes_project 11 84693634 84694595 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0030243.1 MGP_CBAJ_G0018403.1 mouse_genomes_project 11 80296940 80297990 + MGP_CBAJ_P0030243 Olfr23 protein_coding protein_coding MGP_CBAJ_T0027480.1 MGP_CBAJ_G0017711.1 mouse_genomes_project 11 1617140 1722159 - MGP_CBAJ_P0027480 Hormad2 protein_coding protein_coding MGP_CBAJ_T0027481.1 MGP_CBAJ_G0017711.1 mouse_genomes_project 11 1617140 1722517 - MGP_CBAJ_P0027481 Hormad2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027482.1 MGP_CBAJ_G0017711.1 mouse_genomes_project 11 1617709 1722496 - MGP_CBAJ_P0027482 Hormad2 protein_coding protein_coding MGP_CBAJ_T0027483.1 MGP_CBAJ_G0017711.1 mouse_genomes_project 11 1702374 1705569 - Hormad2 protein_coding processed_transcript MGP_CBAJ_T0027484.1 MGP_CBAJ_G0017711.1 mouse_genomes_project 11 1702554 1722519 - MGP_CBAJ_P0027484 Hormad2 protein_coding protein_coding MGP_CBAJ_T0027485.1 MGP_CBAJ_G0017711.1 mouse_genomes_project 11 1705620 1714017 - Hormad2 protein_coding processed_transcript MGP_CBAJ_T0009608.1 MGP_CBAJ_G0007746.1 mouse_genomes_project 11 95207168 95207254 + Mir301 miRNA miRNA MGP_CBAJ_T0012626.1 MGP_CBAJ_G0010738.1 mouse_genomes_project 11 134456106 134456274 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0003233.1 MGP_CBAJ_G0002986.1 mouse_genomes_project 11 112841078 112841776 - Gm11586 antisense antisense MGP_CBAJ_T0016910.1 MGP_CBAJ_G0014894.1 mouse_genomes_project 11 17744708 17753589 - 8430419K02Rik processed_transcript processed_transcript MGP_CBAJ_T0016911.1 MGP_CBAJ_G0014894.1 mouse_genomes_project 11 17744812 17767564 - 8430419K02Rik processed_transcript processed_transcript MGP_CBAJ_T0012594.1 MGP_CBAJ_G0010706.1 mouse_genomes_project 11 117066401 117067668 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0031770.1 MGP_CBAJ_G0018783.1 mouse_genomes_project 11 108315946 108317678 + MGP_CBAJ_P0031770 Pnmt protein_coding protein_coding MGP_CBAJ_T0031771.1 MGP_CBAJ_G0018783.1 mouse_genomes_project 11 108316208 108316979 + Pnmt protein_coding processed_transcript MGP_CBAJ_T0031632.1 MGP_CBAJ_G0018753.1 mouse_genomes_project 11 106914851 107029572 - MGP_CBAJ_P0031632 Npepps protein_coding protein_coding MGP_CBAJ_T0031633.1 MGP_CBAJ_G0018753.1 mouse_genomes_project 11 106914851 107029572 - MGP_CBAJ_P0031633 Npepps protein_coding protein_coding MGP_CBAJ_T0031634.1 MGP_CBAJ_G0018753.1 mouse_genomes_project 11 106914853 107029572 - MGP_CBAJ_P0031634 Npepps protein_coding protein_coding MGP_CBAJ_T0031635.1 MGP_CBAJ_G0018753.1 mouse_genomes_project 11 106915916 106921473 - Npepps protein_coding retained_intron MGP_CBAJ_T0031636.1 MGP_CBAJ_G0018753.1 mouse_genomes_project 11 106915941 106961874 - Npepps protein_coding retained_intron MGP_CBAJ_T0031637.1 MGP_CBAJ_G0018753.1 mouse_genomes_project 11 106915941 107029563 - MGP_CBAJ_P0031637 Npepps protein_coding protein_coding MGP_CBAJ_T0031638.1 MGP_CBAJ_G0018753.1 mouse_genomes_project 11 106916166 106922305 - Npepps protein_coding retained_intron MGP_CBAJ_T0031639.1 MGP_CBAJ_G0018753.1 mouse_genomes_project 11 106922546 106936123 - Npepps protein_coding retained_intron MGP_CBAJ_T0031640.1 MGP_CBAJ_G0018753.1 mouse_genomes_project 11 106935752 106937932 - Npepps protein_coding retained_intron MGP_CBAJ_T0031641.1 MGP_CBAJ_G0018753.1 mouse_genomes_project 11 106940761 106951940 - Npepps protein_coding retained_intron MGP_CBAJ_T0031642.1 MGP_CBAJ_G0018753.1 mouse_genomes_project 11 106943084 106961886 - Npepps protein_coding processed_transcript MGP_CBAJ_T0031643.1 MGP_CBAJ_G0018753.1 mouse_genomes_project 11 106943089 106962791 - MGP_CBAJ_P0031643 Npepps protein_coding protein_coding MGP_CBAJ_T0031644.1 MGP_CBAJ_G0018753.1 mouse_genomes_project 11 106951912 107009729 - MGP_CBAJ_P0031644 Npepps protein_coding nonsense_mediated_decay MGP_CBAJ_T0031645.1 MGP_CBAJ_G0018753.1 mouse_genomes_project 11 106961968 106963154 - Npepps protein_coding retained_intron MGP_CBAJ_T0031646.1 MGP_CBAJ_G0018753.1 mouse_genomes_project 11 106962641 107029539 - MGP_CBAJ_P0031646 Npepps protein_coding protein_coding MGP_CBAJ_T0031647.1 MGP_CBAJ_G0018753.1 mouse_genomes_project 11 106964434 107029572 - MGP_CBAJ_P0031647 Npepps protein_coding nonsense_mediated_decay MGP_CBAJ_T0031648.1 MGP_CBAJ_G0018753.1 mouse_genomes_project 11 106983437 107029572 - Npepps protein_coding retained_intron MGP_CBAJ_T0031649.1 MGP_CBAJ_G0018753.1 mouse_genomes_project 11 106984108 107009721 - MGP_CBAJ_P0031649 Npepps protein_coding nonsense_mediated_decay MGP_CBAJ_T0033710.1 MGP_CBAJ_G0019226.1 mouse_genomes_project 11 133778295 133785646 + MGP_CBAJ_P0033710 Slc25a10 protein_coding protein_coding MGP_CBAJ_T0033711.1 MGP_CBAJ_G0019226.1 mouse_genomes_project 11 133778343 133785052 + Slc25a10 protein_coding processed_transcript MGP_CBAJ_T0033712.1 MGP_CBAJ_G0019226.1 mouse_genomes_project 11 133778364 133782372 + Slc25a10 protein_coding processed_transcript MGP_CBAJ_T0033713.1 MGP_CBAJ_G0019226.1 mouse_genomes_project 11 133778370 133783375 + Slc25a10 protein_coding processed_transcript MGP_CBAJ_T0033714.1 MGP_CBAJ_G0019226.1 mouse_genomes_project 11 133782557 133784422 + Slc25a10 protein_coding processed_transcript MGP_CBAJ_T0033715.1 MGP_CBAJ_G0019226.1 mouse_genomes_project 11 133784183 133784736 + Slc25a10 protein_coding processed_transcript MGP_CBAJ_T0029111.1 MGP_CBAJ_G0018145.1 mouse_genomes_project 11 64978721 64986036 + Drg2 protein_coding retained_intron MGP_CBAJ_T0029112.1 MGP_CBAJ_G0018145.1 mouse_genomes_project 11 64978721 64992521 + MGP_CBAJ_P0029112 Drg2 protein_coding protein_coding MGP_CBAJ_T0029113.1 MGP_CBAJ_G0018145.1 mouse_genomes_project 11 64978754 64986830 + Drg2 protein_coding retained_intron MGP_CBAJ_T0029114.1 MGP_CBAJ_G0018145.1 mouse_genomes_project 11 64983550 64984518 + Drg2 protein_coding retained_intron MGP_CBAJ_T0029115.1 MGP_CBAJ_G0018145.1 mouse_genomes_project 11 64985689 64987224 + Drg2 protein_coding retained_intron MGP_CBAJ_T0012414.1 MGP_CBAJ_G0010526.1 mouse_genomes_project 11 36929463 36930142 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003142.1 MGP_CBAJ_G0002914.1 mouse_genomes_project 11 73035431 73041263 - Gm12301 antisense antisense MGP_CBAJ_T0032269.1 MGP_CBAJ_G0018935.1 mouse_genomes_project 11 112649522 112665367 - MGP_CBAJ_P0032269 Dusp3 protein_coding protein_coding MGP_CBAJ_T0032270.1 MGP_CBAJ_G0018935.1 mouse_genomes_project 11 112649522 112661857 - MGP_CBAJ_P0032270 Dusp3 protein_coding protein_coding MGP_CBAJ_T0032271.1 MGP_CBAJ_G0018935.1 mouse_genomes_project 11 112649522 112665367 - MGP_CBAJ_P0032271 Dusp3 protein_coding protein_coding MGP_CBAJ_T0032272.1 MGP_CBAJ_G0018935.1 mouse_genomes_project 11 112649522 112663153 - MGP_CBAJ_P0032272 Dusp3 protein_coding protein_coding MGP_CBAJ_T0032273.1 MGP_CBAJ_G0018935.1 mouse_genomes_project 11 112651841 112660049 - MGP_CBAJ_P0032273 Dusp3 protein_coding protein_coding MGP_CBAJ_T0032274.1 MGP_CBAJ_G0018935.1 mouse_genomes_project 11 112653088 112663132 - MGP_CBAJ_P0032274 Dusp3 protein_coding protein_coding MGP_CBAJ_T0032275.1 MGP_CBAJ_G0018935.1 mouse_genomes_project 11 112658954 112663105 - MGP_CBAJ_P0032275 Dusp3 protein_coding protein_coding MGP_CBAJ_T0033324.1 MGP_CBAJ_G0019150.1 mouse_genomes_project 11 129276970 129282701 + MGP_CBAJ_P0033324 Sphk1 protein_coding protein_coding MGP_CBAJ_T0033325.1 MGP_CBAJ_G0019150.1 mouse_genomes_project 11 129277166 129281744 + MGP_CBAJ_P0033325 Sphk1 protein_coding protein_coding MGP_CBAJ_T0033326.1 MGP_CBAJ_G0019150.1 mouse_genomes_project 11 129277207 129281328 + Sphk1 protein_coding retained_intron MGP_CBAJ_T0033327.1 MGP_CBAJ_G0019150.1 mouse_genomes_project 11 129277787 129282701 + MGP_CBAJ_P0033327 Sphk1 protein_coding protein_coding MGP_CBAJ_T0033328.1 MGP_CBAJ_G0019150.1 mouse_genomes_project 11 129277954 129282714 + MGP_CBAJ_P0033328 Sphk1 protein_coding protein_coding MGP_CBAJ_T0033329.1 MGP_CBAJ_G0019150.1 mouse_genomes_project 11 129278487 129282718 + MGP_CBAJ_P0033329 Sphk1 protein_coding protein_coding MGP_CBAJ_T0033330.1 MGP_CBAJ_G0019150.1 mouse_genomes_project 11 129278494 129282712 + Sphk1 protein_coding retained_intron MGP_CBAJ_T0033331.1 MGP_CBAJ_G0019150.1 mouse_genomes_project 11 129278497 129281756 + MGP_CBAJ_P0033331 Sphk1 protein_coding protein_coding MGP_CBAJ_T0033332.1 MGP_CBAJ_G0019150.1 mouse_genomes_project 11 129278500 129281385 + MGP_CBAJ_P0033332 Sphk1 protein_coding protein_coding MGP_CBAJ_T0033333.1 MGP_CBAJ_G0019150.1 mouse_genomes_project 11 129278516 129282718 + MGP_CBAJ_P0033333 Sphk1 protein_coding protein_coding MGP_CBAJ_T0033334.1 MGP_CBAJ_G0019150.1 mouse_genomes_project 11 129278968 129282701 + MGP_CBAJ_P0033334 Sphk1 protein_coding protein_coding MGP_CBAJ_T0033335.1 MGP_CBAJ_G0019150.1 mouse_genomes_project 11 129279294 129281680 + Sphk1 protein_coding processed_transcript MGP_CBAJ_T0033336.1 MGP_CBAJ_G0019150.1 mouse_genomes_project 11 129279311 129282039 + MGP_CBAJ_P0033336 Sphk1 protein_coding protein_coding MGP_CBAJ_T0033337.1 MGP_CBAJ_G0019150.1 mouse_genomes_project 11 129279618 129281742 + MGP_CBAJ_P0033337 Sphk1 protein_coding protein_coding MGP_CBAJ_T0033338.1 MGP_CBAJ_G0019150.1 mouse_genomes_project 11 129280203 129281332 + Sphk1 protein_coding retained_intron MGP_CBAJ_T0033339.1 MGP_CBAJ_G0019150.1 mouse_genomes_project 11 129280783 129282714 + MGP_CBAJ_P0033339 Sphk1 protein_coding protein_coding MGP_CBAJ_T0003080.1 MGP_CBAJ_G0002863.1 mouse_genomes_project 11 53102320 53103243 - Gm12195 antisense antisense MGP_CBAJ_T0031999.1 MGP_CBAJ_G0018877.1 mouse_genomes_project 11 110862889 110873010 - MGP_CBAJ_P0031999 Klhl11 protein_coding protein_coding MGP_CBAJ_T0009544.1 MGP_CBAJ_G0007682.1 mouse_genomes_project 11 28988245 28988317 + Mir216a miRNA miRNA MGP_CBAJ_T0012513.1 MGP_CBAJ_G0010625.1 mouse_genomes_project 11 80198302 80200122 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0030810.1 MGP_CBAJ_G0018538.1 mouse_genomes_project 11 87767113 87775656 + Psmd11 protein_coding retained_intron MGP_CBAJ_T0030811.1 MGP_CBAJ_G0018538.1 mouse_genomes_project 11 87767121 87817605 + MGP_CBAJ_P0030811 Psmd11 protein_coding protein_coding MGP_CBAJ_T0030812.1 MGP_CBAJ_G0018538.1 mouse_genomes_project 11 87767123 87820786 + MGP_CBAJ_P0030812 Psmd11 protein_coding protein_coding MGP_CBAJ_T0030813.1 MGP_CBAJ_G0018538.1 mouse_genomes_project 11 87767142 87818002 + Psmd11 protein_coding retained_intron MGP_CBAJ_T0030814.1 MGP_CBAJ_G0018538.1 mouse_genomes_project 11 87767144 87788626 + MGP_CBAJ_P0030814 Psmd11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030815.1 MGP_CBAJ_G0018538.1 mouse_genomes_project 11 87767163 87803339 + MGP_CBAJ_P0030815 Psmd11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030816.1 MGP_CBAJ_G0018538.1 mouse_genomes_project 11 87767184 87798893 + MGP_CBAJ_P0030816 Psmd11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030817.1 MGP_CBAJ_G0018538.1 mouse_genomes_project 11 87767184 87813681 + MGP_CBAJ_P0030817 Psmd11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030818.1 MGP_CBAJ_G0018538.1 mouse_genomes_project 11 87767184 87817235 + MGP_CBAJ_P0030818 Psmd11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030819.1 MGP_CBAJ_G0018538.1 mouse_genomes_project 11 87767188 87799074 + MGP_CBAJ_P0030819 Psmd11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030820.1 MGP_CBAJ_G0018538.1 mouse_genomes_project 11 87768385 87799078 + MGP_CBAJ_P0030820 Psmd11 protein_coding protein_coding MGP_CBAJ_T0030821.1 MGP_CBAJ_G0018538.1 mouse_genomes_project 11 87799018 87817571 + MGP_CBAJ_P0030821 Psmd11 protein_coding protein_coding MGP_CBAJ_T0030822.1 MGP_CBAJ_G0018538.1 mouse_genomes_project 11 87803356 87817410 + MGP_CBAJ_P0030822 Psmd11 protein_coding protein_coding MGP_CBAJ_T0030823.1 MGP_CBAJ_G0018538.1 mouse_genomes_project 11 87805260 87820786 + MGP_CBAJ_P0030823 Psmd11 protein_coding protein_coding MGP_CBAJ_T0030824.1 MGP_CBAJ_G0018538.1 mouse_genomes_project 11 87805264 87817337 + MGP_CBAJ_P0030824 Psmd11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031276.1 MGP_CBAJ_G0018664.1 mouse_genomes_project 11 98988979 99048618 - MGP_CBAJ_P0031276 Hlf protein_coding protein_coding MGP_CBAJ_T0031277.1 MGP_CBAJ_G0018664.1 mouse_genomes_project 11 98991432 99047410 - Hlf protein_coding processed_transcript MGP_CBAJ_T0031278.1 MGP_CBAJ_G0018664.1 mouse_genomes_project 11 98991584 99042815 - Hlf protein_coding processed_transcript MGP_CBAJ_T0031279.1 MGP_CBAJ_G0018664.1 mouse_genomes_project 11 98993270 99036193 - Hlf protein_coding processed_transcript MGP_CBAJ_T0031280.1 MGP_CBAJ_G0018664.1 mouse_genomes_project 11 98997994 99042578 - MGP_CBAJ_P0031280 Hlf protein_coding protein_coding MGP_CBAJ_T0031281.1 MGP_CBAJ_G0018664.1 mouse_genomes_project 11 99042527 99047310 - Hlf protein_coding processed_transcript MGP_CBAJ_T0028941.1 MGP_CBAJ_G0018090.1 mouse_genomes_project 11 62884502 62885624 + MGP_CBAJ_P0028941 Olfr324 protein_coding protein_coding MGP_CBAJ_T0006091.1 MGP_CBAJ_G0005079.1 mouse_genomes_project 11 17990808 18001284 + 4933406G16Rik lincRNA lincRNA MGP_CBAJ_T0009615.1 MGP_CBAJ_G0007753.1 mouse_genomes_project 11 105873221 105873331 + Mir10a miRNA miRNA MGP_CBAJ_T0027906.1 MGP_CBAJ_G0017811.1 mouse_genomes_project 11 22492039 22495327 + MGP_CBAJ_P0027906 Zrsr1 protein_coding protein_coding MGP_CBAJ_T0009594.1 MGP_CBAJ_G0007732.1 mouse_genomes_project 11 81869453 81869568 - miRNA miRNA MGP_CBAJ_T0031325.1 MGP_CBAJ_G0018673.1 mouse_genomes_project 11 103084660 103106291 - MGP_CBAJ_P0031325 Gm20390 protein_coding protein_coding MGP_CBAJ_T0028884.1 MGP_CBAJ_G0018066.1 mouse_genomes_project 11 61960395 61964506 - MGP_CBAJ_P0028884 Hand1 protein_coding protein_coding MGP_CBAJ_T0028885.1 MGP_CBAJ_G0018066.1 mouse_genomes_project 11 61960397 61963843 - MGP_CBAJ_P0028885 Hand1 protein_coding protein_coding MGP_CBAJ_T0028886.1 MGP_CBAJ_G0018066.1 mouse_genomes_project 11 61963389 61964506 - MGP_CBAJ_P0028886 Hand1 protein_coding protein_coding MGP_CBAJ_T0033299.1 MGP_CBAJ_G0019146.1 mouse_genomes_project 11 129024475 129109540 - MGP_CBAJ_P0033299 Rnf157 protein_coding protein_coding MGP_CBAJ_T0033300.1 MGP_CBAJ_G0019146.1 mouse_genomes_project 11 129024475 129052450 - MGP_CBAJ_P0033300 Rnf157 protein_coding protein_coding MGP_CBAJ_T0033301.1 MGP_CBAJ_G0019146.1 mouse_genomes_project 11 129024475 129109540 - MGP_CBAJ_P0033301 Rnf157 protein_coding protein_coding MGP_CBAJ_T0033302.1 MGP_CBAJ_G0019146.1 mouse_genomes_project 11 129026468 129035870 - Rnf157 protein_coding processed_transcript MGP_CBAJ_T0033303.1 MGP_CBAJ_G0019146.1 mouse_genomes_project 11 129026535 129036344 - MGP_CBAJ_P0033303 Rnf157 protein_coding protein_coding MGP_CBAJ_T0033304.1 MGP_CBAJ_G0019146.1 mouse_genomes_project 11 129041069 129052868 - Rnf157 protein_coding processed_transcript MGP_CBAJ_T0033305.1 MGP_CBAJ_G0019146.1 mouse_genomes_project 11 129042385 129043887 - Rnf157 protein_coding processed_transcript MGP_CBAJ_T0033306.1 MGP_CBAJ_G0019146.1 mouse_genomes_project 11 129050712 129052676 - Rnf157 protein_coding processed_transcript MGP_CBAJ_T0033307.1 MGP_CBAJ_G0019146.1 mouse_genomes_project 11 129052620 129053376 - Rnf157 protein_coding processed_transcript MGP_CBAJ_T0033308.1 MGP_CBAJ_G0019146.1 mouse_genomes_project 11 129053252 129083066 - Rnf157 protein_coding processed_transcript MGP_CBAJ_T0033309.1 MGP_CBAJ_G0019146.1 mouse_genomes_project 11 129094487 129109568 - Rnf157 protein_coding processed_transcript MGP_CBAJ_T0003242.1 MGP_CBAJ_G0002995.1 mouse_genomes_project 11 117274662 117294395 - Gm11651 antisense antisense MGP_CBAJ_T0003243.1 MGP_CBAJ_G0002995.1 mouse_genomes_project 11 117280700 117294367 - Gm11651 antisense antisense MGP_CBAJ_T0031910.1 MGP_CBAJ_G0018825.1 mouse_genomes_project 11 109762715 109763015 - MGP_CBAJ_P0031910 Gm11939 protein_coding protein_coding MGP_CBAJ_T0098737.1 MGP_CBAJ_G0036992.1 mouse_genomes_project 11 128172442 128172549 + Gm25364 snRNA snRNA MGP_CBAJ_T0098694.1 MGP_CBAJ_G0036949.1 mouse_genomes_project 11 74798106 74798207 + Gm25371 snRNA snRNA MGP_CBAJ_T0003122.1 MGP_CBAJ_G0002899.1 mouse_genomes_project 11 67364670 67365665 - Gm12279 antisense antisense MGP_CBAJ_T0033505.1 MGP_CBAJ_G0019188.1 mouse_genomes_project 11 131428153 131443509 + MGP_CBAJ_P0033505 C1qtnf1 protein_coding protein_coding MGP_CBAJ_T0033506.1 MGP_CBAJ_G0019188.1 mouse_genomes_project 11 131428433 131449642 + MGP_CBAJ_P0033506 C1qtnf1 protein_coding protein_coding MGP_CBAJ_T0033507.1 MGP_CBAJ_G0019188.1 mouse_genomes_project 11 131433770 131449642 + MGP_CBAJ_P0033507 C1qtnf1 protein_coding protein_coding MGP_CBAJ_T0033508.1 MGP_CBAJ_G0019188.1 mouse_genomes_project 11 131443142 131443516 + MGP_CBAJ_P0033508 C1qtnf1 protein_coding protein_coding MGP_CBAJ_T0006130.1 MGP_CBAJ_G0005112.1 mouse_genomes_project 11 39023092 39037291 + Gm12128 lincRNA lincRNA MGP_CBAJ_T0033374.1 MGP_CBAJ_G0019160.1 mouse_genomes_project 11 129587067 129592926 - Jmjd6 protein_coding retained_intron MGP_CBAJ_T0033375.1 MGP_CBAJ_G0019160.1 mouse_genomes_project 11 129587067 129593094 - MGP_CBAJ_P0033375 Jmjd6 protein_coding protein_coding MGP_CBAJ_T0033376.1 MGP_CBAJ_G0019160.1 mouse_genomes_project 11 129587068 129592935 - Jmjd6 protein_coding retained_intron MGP_CBAJ_T0033377.1 MGP_CBAJ_G0019160.1 mouse_genomes_project 11 129587068 129593000 - MGP_CBAJ_P0033377 Jmjd6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033378.1 MGP_CBAJ_G0019160.1 mouse_genomes_project 11 129587070 129590881 - MGP_CBAJ_P0033378 Jmjd6 protein_coding protein_coding MGP_CBAJ_T0033379.1 MGP_CBAJ_G0019160.1 mouse_genomes_project 11 129587223 129592350 - MGP_CBAJ_P0033379 Jmjd6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033380.1 MGP_CBAJ_G0019160.1 mouse_genomes_project 11 129587248 129592365 - MGP_CBAJ_P0033380 Jmjd6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012489.1 MGP_CBAJ_G0010601.1 mouse_genomes_project 11 68787271 68788553 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0029474.1 MGP_CBAJ_G0018225.1 mouse_genomes_project 11 73495495 73771459 + MGP_CBAJ_P0029474 Stx8 protein_coding protein_coding MGP_CBAJ_T0029475.1 MGP_CBAJ_G0018225.1 mouse_genomes_project 11 73495773 73519080 + MGP_CBAJ_P0029475 Stx8 protein_coding protein_coding MGP_CBAJ_T0029476.1 MGP_CBAJ_G0018225.1 mouse_genomes_project 11 73495784 73503897 + MGP_CBAJ_P0029476 Stx8 protein_coding protein_coding MGP_CBAJ_T0029477.1 MGP_CBAJ_G0018225.1 mouse_genomes_project 11 73495794 73768470 + Stx8 protein_coding processed_transcript MGP_CBAJ_T0029478.1 MGP_CBAJ_G0018225.1 mouse_genomes_project 11 73495796 73503770 + Stx8 protein_coding processed_transcript MGP_CBAJ_T0029479.1 MGP_CBAJ_G0018225.1 mouse_genomes_project 11 73495810 73502946 + Stx8 protein_coding processed_transcript MGP_CBAJ_T0030232.1 MGP_CBAJ_G0018396.1 mouse_genomes_project 11 80130805 80135007 - MGP_CBAJ_P0030232 Olfr389 protein_coding protein_coding MGP_CBAJ_T0030233.1 MGP_CBAJ_G0018396.1 mouse_genomes_project 11 80131071 80134953 - MGP_CBAJ_P0030233 Olfr389 protein_coding protein_coding MGP_CBAJ_T0029728.1 MGP_CBAJ_G0018280.1 mouse_genomes_project 11 75624585 75641542 - MGP_CBAJ_P0029728 Chrnb1 protein_coding protein_coding MGP_CBAJ_T0029729.1 MGP_CBAJ_G0018280.1 mouse_genomes_project 11 75638302 75639869 - Chrnb1 protein_coding retained_intron MGP_CBAJ_T0029730.1 MGP_CBAJ_G0018280.1 mouse_genomes_project 11 75638377 75639413 - Chrnb1 protein_coding retained_intron MGP_CBAJ_T0029731.1 MGP_CBAJ_G0018280.1 mouse_genomes_project 11 75639112 75641504 - Chrnb1 protein_coding processed_transcript MGP_CBAJ_T0032787.1 MGP_CBAJ_G0019040.1 mouse_genomes_project 11 119023207 119044116 + MGP_CBAJ_P0032787 Psmd12 protein_coding protein_coding MGP_CBAJ_T0032788.1 MGP_CBAJ_G0019040.1 mouse_genomes_project 11 119023251 119050266 + MGP_CBAJ_P0032788 Psmd12 protein_coding protein_coding MGP_CBAJ_T0032789.1 MGP_CBAJ_G0019040.1 mouse_genomes_project 11 119023300 119043675 + MGP_CBAJ_P0032789 Psmd12 protein_coding protein_coding MGP_CBAJ_T0012523.1 MGP_CBAJ_G0010635.1 mouse_genomes_project 11 84556791 84556971 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0016998.1 MGP_CBAJ_G0014947.1 mouse_genomes_project 11 110734010 110736618 - processed_transcript processed_transcript MGP_CBAJ_T0011175.1 MGP_CBAJ_G0009313.1 mouse_genomes_project 11 57302198 57302508 + Gm22275 misc_RNA misc_RNA MGP_CBAJ_T0029038.1 MGP_CBAJ_G0018132.1 mouse_genomes_project 11 64211062 64214809 - Pld6 protein_coding processed_transcript MGP_CBAJ_T0029039.1 MGP_CBAJ_G0018132.1 mouse_genomes_project 11 64211865 64214806 - MGP_CBAJ_P0029039 Pld6 protein_coding protein_coding MGP_CBAJ_T0031858.1 MGP_CBAJ_G0018804.1 mouse_genomes_project 11 109032483 109082166 + MGP_CBAJ_P0031858 Rara protein_coding protein_coding MGP_CBAJ_T0031859.1 MGP_CBAJ_G0018804.1 mouse_genomes_project 11 109042359 109082166 + MGP_CBAJ_P0031859 Rara protein_coding protein_coding MGP_CBAJ_T0031860.1 MGP_CBAJ_G0018804.1 mouse_genomes_project 11 109042379 109082946 + MGP_CBAJ_P0031860 Rara protein_coding protein_coding MGP_CBAJ_T0031861.1 MGP_CBAJ_G0018804.1 mouse_genomes_project 11 109042989 109055025 + Rara protein_coding processed_transcript MGP_CBAJ_T0031862.1 MGP_CBAJ_G0018804.1 mouse_genomes_project 11 109044372 109082946 + MGP_CBAJ_P0031862 Rara protein_coding protein_coding MGP_CBAJ_T0031863.1 MGP_CBAJ_G0018804.1 mouse_genomes_project 11 109044373 109055154 + Rara protein_coding processed_transcript MGP_CBAJ_T0031864.1 MGP_CBAJ_G0018804.1 mouse_genomes_project 11 109068467 109082946 + MGP_CBAJ_P0031864 Rara protein_coding protein_coding MGP_CBAJ_T0028963.1 MGP_CBAJ_G0018104.1 mouse_genomes_project 11 63181815 63199576 - MGP_CBAJ_P0028963 Zfp39 protein_coding protein_coding MGP_CBAJ_T0029466.1 MGP_CBAJ_G0018223.1 mouse_genomes_project 11 73359240 73440605 - MGP_CBAJ_P0029466 Usp43 protein_coding protein_coding MGP_CBAJ_T0029467.1 MGP_CBAJ_G0018223.1 mouse_genomes_project 11 73359240 73440605 - MGP_CBAJ_P0029467 Usp43 protein_coding protein_coding MGP_CBAJ_T0029468.1 MGP_CBAJ_G0018223.1 mouse_genomes_project 11 73360074 73386021 - Usp43 protein_coding retained_intron MGP_CBAJ_T0029469.1 MGP_CBAJ_G0018223.1 mouse_genomes_project 11 73412960 73439661 - Usp43 protein_coding processed_transcript MGP_CBAJ_T0009647.1 MGP_CBAJ_G0007785.1 mouse_genomes_project 11 129894688 129894765 + Gm24323 miRNA miRNA MGP_CBAJ_T0003147.1 MGP_CBAJ_G0002919.1 mouse_genomes_project 11 75080528 75082820 - Kcnab3os antisense antisense MGP_CBAJ_T0027477.1 MGP_CBAJ_G0017710.1 mouse_genomes_project 11 1519720 1535714 + MGP_CBAJ_P0027477 Lif protein_coding protein_coding MGP_CBAJ_T0027478.1 MGP_CBAJ_G0017710.1 mouse_genomes_project 11 1529995 1531449 + Lif protein_coding processed_transcript MGP_CBAJ_T0027479.1 MGP_CBAJ_G0017710.1 mouse_genomes_project 11 1530294 1535714 + MGP_CBAJ_P0027479 Lif protein_coding protein_coding MGP_CBAJ_T0030538.1 MGP_CBAJ_G0018477.1 mouse_genomes_project 11 84661218 84667458 - Cryba1 protein_coding retained_intron MGP_CBAJ_T0030539.1 MGP_CBAJ_G0018477.1 mouse_genomes_project 11 84661230 84670907 - MGP_CBAJ_P0030539 Cryba1 protein_coding protein_coding MGP_CBAJ_T0009534.1 MGP_CBAJ_G0007672.1 mouse_genomes_project 11 4116102 4116155 - Gm22123 miRNA miRNA MGP_CBAJ_T0003071.1 MGP_CBAJ_G0002854.1 mouse_genomes_project 11 37474919 37476857 + Gm12127 antisense antisense MGP_CBAJ_T0033475.1 MGP_CBAJ_G0019181.1 mouse_genomes_project 11 131004965 131125981 - MGP_CBAJ_P0033475 Dnah17 protein_coding protein_coding MGP_CBAJ_T0033476.1 MGP_CBAJ_G0019181.1 mouse_genomes_project 11 131004965 131125981 - MGP_CBAJ_P0033476 Dnah17 protein_coding protein_coding MGP_CBAJ_T0033477.1 MGP_CBAJ_G0019181.1 mouse_genomes_project 11 131006322 131100055 - MGP_CBAJ_P0033477 Dnah17 protein_coding protein_coding MGP_CBAJ_T0033478.1 MGP_CBAJ_G0019181.1 mouse_genomes_project 11 131078056 131086681 - MGP_CBAJ_P0033478 Dnah17 protein_coding protein_coding MGP_CBAJ_T0033479.1 MGP_CBAJ_G0019181.1 mouse_genomes_project 11 131109019 131122450 - MGP_CBAJ_P0033479 Dnah17 protein_coding protein_coding MGP_CBAJ_T0009649.1 MGP_CBAJ_G0007787.1 mouse_genomes_project 11 131878354 131878420 - Gm25040 miRNA miRNA MGP_CBAJ_T0003083.1 MGP_CBAJ_G0002866.1 mouse_genomes_project 11 53905638 53906889 - Gm12660 antisense antisense MGP_CBAJ_T0032107.1 MGP_CBAJ_G0018900.1 mouse_genomes_project 11 111581600 111585214 - MGP_CBAJ_P0032107 Psmc3ip protein_coding protein_coding MGP_CBAJ_T0032108.1 MGP_CBAJ_G0018900.1 mouse_genomes_project 11 111581909 111585178 - Psmc3ip protein_coding retained_intron MGP_CBAJ_T0032109.1 MGP_CBAJ_G0018900.1 mouse_genomes_project 11 111581934 111583938 - Psmc3ip protein_coding retained_intron MGP_CBAJ_T0032110.1 MGP_CBAJ_G0018900.1 mouse_genomes_project 11 111582264 111585154 - MGP_CBAJ_P0032110 Psmc3ip protein_coding nonsense_mediated_decay MGP_CBAJ_T0027916.1 MGP_CBAJ_G0017813.1 mouse_genomes_project 11 22533256 22546140 + MGP_CBAJ_P0027916 Fam161a protein_coding protein_coding MGP_CBAJ_T0027917.1 MGP_CBAJ_G0017813.1 mouse_genomes_project 11 22534166 22555431 + MGP_CBAJ_P0027917 Fam161a protein_coding protein_coding MGP_CBAJ_T0027918.1 MGP_CBAJ_G0017813.1 mouse_genomes_project 11 22534190 22549656 + MGP_CBAJ_P0027918 Fam161a protein_coding protein_coding MGP_CBAJ_T0027919.1 MGP_CBAJ_G0017813.1 mouse_genomes_project 11 22539182 22549646 + MGP_CBAJ_P0027919 Fam161a protein_coding protein_coding MGP_CBAJ_T0027920.1 MGP_CBAJ_G0017813.1 mouse_genomes_project 11 22546018 22556832 + MGP_CBAJ_P0027920 Fam161a protein_coding protein_coding MGP_CBAJ_T0027921.1 MGP_CBAJ_G0017813.1 mouse_genomes_project 11 22546459 22549645 + MGP_CBAJ_P0027921 Fam161a protein_coding protein_coding MGP_CBAJ_T0016994.1 MGP_CBAJ_G0014943.1 mouse_genomes_project 11 107898359 107902150 + Gm11629 processed_transcript processed_transcript MGP_CBAJ_T0101532.1 MGP_CBAJ_G0039564.1 mouse_genomes_project 11 49115849 49116122 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0033499.1 MGP_CBAJ_G0019187.1 mouse_genomes_project 11 131406008 131418923 - MGP_CBAJ_P0033499 Cant1 protein_coding protein_coding MGP_CBAJ_T0033500.1 MGP_CBAJ_G0019187.1 mouse_genomes_project 11 131406008 131418889 - MGP_CBAJ_P0033500 Cant1 protein_coding protein_coding MGP_CBAJ_T0033501.1 MGP_CBAJ_G0019187.1 mouse_genomes_project 11 131406009 131418860 - MGP_CBAJ_P0033501 Cant1 protein_coding protein_coding MGP_CBAJ_T0033502.1 MGP_CBAJ_G0019187.1 mouse_genomes_project 11 131407360 131418889 - MGP_CBAJ_P0033502 Cant1 protein_coding protein_coding MGP_CBAJ_T0033503.1 MGP_CBAJ_G0019187.1 mouse_genomes_project 11 131407360 131415518 - MGP_CBAJ_P0033503 Cant1 protein_coding protein_coding MGP_CBAJ_T0033504.1 MGP_CBAJ_G0019187.1 mouse_genomes_project 11 131407360 131418860 - MGP_CBAJ_P0033504 Cant1 protein_coding protein_coding MGP_CBAJ_T0031780.1 MGP_CBAJ_G0018786.1 mouse_genomes_project 11 108380853 108382137 - MGP_CBAJ_P0031780 Mien1 protein_coding protein_coding MGP_CBAJ_T0031165.1 MGP_CBAJ_G0018632.1 mouse_genomes_project 11 95782236 95806595 + MGP_CBAJ_P0031165 Mtmr4 protein_coding protein_coding MGP_CBAJ_T0031166.1 MGP_CBAJ_G0018632.1 mouse_genomes_project 11 95782293 95806595 + MGP_CBAJ_P0031166 Mtmr4 protein_coding protein_coding MGP_CBAJ_T0031167.1 MGP_CBAJ_G0018632.1 mouse_genomes_project 11 95782300 95789098 + MGP_CBAJ_P0031167 Mtmr4 protein_coding protein_coding MGP_CBAJ_T0031168.1 MGP_CBAJ_G0018632.1 mouse_genomes_project 11 95782538 95787884 + MGP_CBAJ_P0031168 Mtmr4 protein_coding protein_coding MGP_CBAJ_T0031169.1 MGP_CBAJ_G0018632.1 mouse_genomes_project 11 95782971 95805465 + MGP_CBAJ_P0031169 Mtmr4 protein_coding protein_coding MGP_CBAJ_T0031170.1 MGP_CBAJ_G0018632.1 mouse_genomes_project 11 95785780 95791230 + MGP_CBAJ_P0031170 Mtmr4 protein_coding protein_coding MGP_CBAJ_T0012498.1 MGP_CBAJ_G0010610.1 mouse_genomes_project 11 75563890 75564480 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0028462.1 MGP_CBAJ_G0017956.1 mouse_genomes_project 11 52360873 52361710 + MGP_CBAJ_P0028462 protein_coding protein_coding MGP_CBAJ_T0028375.1 MGP_CBAJ_G0017927.1 mouse_genomes_project 11 49219556 49250293 + MGP_CBAJ_P0028375 Havcr1 protein_coding protein_coding MGP_CBAJ_T0028376.1 MGP_CBAJ_G0017927.1 mouse_genomes_project 11 49225460 49268326 + MGP_CBAJ_P0028376 Havcr1 protein_coding protein_coding MGP_CBAJ_T0028377.1 MGP_CBAJ_G0017927.1 mouse_genomes_project 11 49240619 49268324 + MGP_CBAJ_P0028377 Havcr1 protein_coding protein_coding MGP_CBAJ_T0028378.1 MGP_CBAJ_G0017927.1 mouse_genomes_project 11 49241273 49268326 + MGP_CBAJ_P0028378 Havcr1 protein_coding protein_coding MGP_CBAJ_T0028379.1 MGP_CBAJ_G0017927.1 mouse_genomes_project 11 49241282 49267361 + MGP_CBAJ_P0028379 Havcr1 protein_coding unknown_likely_coding MGP_CBAJ_T0029662.1 MGP_CBAJ_G0018266.1 mouse_genomes_project 11 75416128 75419230 - MGP_CBAJ_P0029662 Shbg protein_coding protein_coding MGP_CBAJ_T0029663.1 MGP_CBAJ_G0018266.1 mouse_genomes_project 11 75416972 75418265 - Shbg protein_coding processed_transcript MGP_CBAJ_T0101571.1 MGP_CBAJ_G0039603.1 mouse_genomes_project 11 135308730 135313185 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0101554.1 MGP_CBAJ_G0039586.1 mouse_genomes_project 11 91425203 91425347 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0012417.1 MGP_CBAJ_G0010529.1 mouse_genomes_project 11 42157098 42157760 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009631.1 MGP_CBAJ_G0007769.1 mouse_genomes_project 11 112935414 112935525 - Mir8101 miRNA miRNA MGP_CBAJ_T0012508.1 MGP_CBAJ_G0010620.1 mouse_genomes_project 11 79089544 79091334 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0028978.1 MGP_CBAJ_G0018114.1 mouse_genomes_project 11 63296973 63312283 - MGP_CBAJ_P0028978 protein_coding unknown_likely_coding MGP_CBAJ_T0028979.1 MGP_CBAJ_G0018114.1 mouse_genomes_project 11 63296973 63312183 - MGP_CBAJ_P0028979 protein_coding unknown_likely_coding MGP_CBAJ_T0028980.1 MGP_CBAJ_G0018114.1 mouse_genomes_project 11 63296977 63464986 - MGP_CBAJ_P0028980 protein_coding protein_coding MGP_CBAJ_T0028981.1 MGP_CBAJ_G0018114.1 mouse_genomes_project 11 63296980 63336410 - MGP_CBAJ_P0028981 protein_coding protein_coding MGP_CBAJ_T0028982.1 MGP_CBAJ_G0018114.1 mouse_genomes_project 11 63313464 63336383 - MGP_CBAJ_P0028982 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028983.1 MGP_CBAJ_G0018114.1 mouse_genomes_project 11 63313464 63465013 - MGP_CBAJ_P0028983 protein_coding protein_coding MGP_CBAJ_T0028984.1 MGP_CBAJ_G0018114.1 mouse_genomes_project 11 63313464 63464986 - MGP_CBAJ_P0028984 protein_coding protein_coding MGP_CBAJ_T0028985.1 MGP_CBAJ_G0018114.1 mouse_genomes_project 11 63313465 63330840 - MGP_CBAJ_P0028985 protein_coding protein_coding MGP_CBAJ_T0028986.1 MGP_CBAJ_G0018114.1 mouse_genomes_project 11 63313979 63464986 - MGP_CBAJ_P0028986 protein_coding unknown_likely_coding MGP_CBAJ_T0028987.1 MGP_CBAJ_G0018114.1 mouse_genomes_project 11 63313979 63464986 - MGP_CBAJ_P0028987 protein_coding unknown_likely_coding MGP_CBAJ_T0028988.1 MGP_CBAJ_G0018114.1 mouse_genomes_project 11 63386744 63393998 - MGP_CBAJ_P0028988 protein_coding protein_coding MGP_CBAJ_T0099955.1 MGP_CBAJ_G0038210.1 mouse_genomes_project 11 107621079 107621216 - Snora21 snoRNA snoRNA MGP_CBAJ_T0012538.1 MGP_CBAJ_G0010650.1 mouse_genomes_project 11 90263912 90264206 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0033636.1 MGP_CBAJ_G0019211.1 mouse_genomes_project 11 133321476 133323254 + MGP_CBAJ_P0033636 1810043H04Rik protein_coding protein_coding MGP_CBAJ_T0033637.1 MGP_CBAJ_G0019211.1 mouse_genomes_project 11 133321492 133322912 + MGP_CBAJ_P0033637 1810043H04Rik protein_coding protein_coding MGP_CBAJ_T0033638.1 MGP_CBAJ_G0019211.1 mouse_genomes_project 11 133321647 133322963 + 1810043H04Rik protein_coding retained_intron MGP_CBAJ_T0030244.1 MGP_CBAJ_G0018404.1 mouse_genomes_project 11 80332562 80333653 + MGP_CBAJ_P0030244 Olfr397 protein_coding protein_coding MGP_CBAJ_T0009556.1 MGP_CBAJ_G0007694.1 mouse_genomes_project 11 53221183 53221245 + Mir6919 miRNA miRNA MGP_CBAJ_T0012467.1 MGP_CBAJ_G0010579.1 mouse_genomes_project 11 62290174 62290842 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0033928.1 MGP_CBAJ_G0019273.1 mouse_genomes_project 11 135282205 135288747 + Ptchd3 protein_coding retained_intron MGP_CBAJ_T0033929.1 MGP_CBAJ_G0019273.1 mouse_genomes_project 11 135282205 135295382 + MGP_CBAJ_P0033929 Ptchd3 protein_coding protein_coding MGP_CBAJ_T0031208.1 MGP_CBAJ_G0018641.1 mouse_genomes_project 11 96142771 96144664 - MGP_CBAJ_P0031208 protein_coding protein_coding MGP_CBAJ_T0030088.1 MGP_CBAJ_G0018352.1 mouse_genomes_project 11 78144584 78154106 - MGP_CBAJ_P0030088 Aipl1 protein_coding protein_coding MGP_CBAJ_T0030089.1 MGP_CBAJ_G0018352.1 mouse_genomes_project 11 78145338 78154126 - MGP_CBAJ_P0030089 Aipl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0011192.1 MGP_CBAJ_G0009330.1 mouse_genomes_project 11 129589423 129589596 - Gm27401 misc_RNA misc_RNA MGP_CBAJ_T0027830.1 MGP_CBAJ_G0017791.1 mouse_genomes_project 11 18952761 19089575 + MGP_CBAJ_P0027830 Spred2 protein_coding protein_coding MGP_CBAJ_T0027831.1 MGP_CBAJ_G0017791.1 mouse_genomes_project 11 18952828 19086895 + MGP_CBAJ_P0027831 Spred2 protein_coding protein_coding MGP_CBAJ_T0027832.1 MGP_CBAJ_G0017791.1 mouse_genomes_project 11 18989700 19059346 + MGP_CBAJ_P0027832 Spred2 protein_coding protein_coding MGP_CBAJ_T0027427.1 MGP_CBAJ_G0017698.1 mouse_genomes_project 11 1160720 1188218 + MGP_CBAJ_P0027427 Pes1 protein_coding protein_coding MGP_CBAJ_T0027428.1 MGP_CBAJ_G0017698.1 mouse_genomes_project 11 1160754 1172101 + Pes1 protein_coding processed_transcript MGP_CBAJ_T0027429.1 MGP_CBAJ_G0017698.1 mouse_genomes_project 11 1160794 1178150 + Pes1 protein_coding processed_transcript MGP_CBAJ_T0012364.1 MGP_CBAJ_G0010476.1 mouse_genomes_project 11 20085617 20085824 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097899.1 MGP_CBAJ_G0036172.1 mouse_genomes_project 11 9322005 9322135 + Gm23065 rRNA rRNA MGP_CBAJ_T0006249.1 MGP_CBAJ_G0005203.1 mouse_genomes_project 11 113690419 113975313 + Gm26668 lincRNA lincRNA MGP_CBAJ_T0006105.1 MGP_CBAJ_G0005093.1 mouse_genomes_project 11 24100988 24424224 + lincRNA lincRNA MGP_CBAJ_T0032783.1 MGP_CBAJ_G0019039.1 mouse_genomes_project 11 118721192 119012302 - MGP_CBAJ_P0032783 Pitpnc1 protein_coding protein_coding MGP_CBAJ_T0032784.1 MGP_CBAJ_G0019039.1 mouse_genomes_project 11 118721192 118861473 - MGP_CBAJ_P0032784 Pitpnc1 protein_coding protein_coding MGP_CBAJ_T0032785.1 MGP_CBAJ_G0019039.1 mouse_genomes_project 11 118739529 118874805 - MGP_CBAJ_P0032785 Pitpnc1 protein_coding protein_coding MGP_CBAJ_T0032786.1 MGP_CBAJ_G0019039.1 mouse_genomes_project 11 118844495 118861362 - Pitpnc1 protein_coding processed_transcript MGP_CBAJ_T0012404.1 MGP_CBAJ_G0010516.1 mouse_genomes_project 11 31427544 31428524 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098672.1 MGP_CBAJ_G0036927.1 mouse_genomes_project 11 19309941 19310044 - Gm26253 snRNA snRNA MGP_CBAJ_T0033462.1 MGP_CBAJ_G0019176.1 mouse_genomes_project 11 130815113 130821581 + MGP_CBAJ_P0033462 Birc5 protein_coding protein_coding MGP_CBAJ_T0033463.1 MGP_CBAJ_G0019176.1 mouse_genomes_project 11 130815181 130821592 + MGP_CBAJ_P0033463 Birc5 protein_coding protein_coding MGP_CBAJ_T0006218.1 MGP_CBAJ_G0005182.1 mouse_genomes_project 11 96618317 96621965 + Gm44783 lincRNA lincRNA MGP_CBAJ_T0098667.1 MGP_CBAJ_G0036922.1 mouse_genomes_project 11 5715179 5715241 - Gm27393 snRNA snRNA MGP_CBAJ_T0030943.1 MGP_CBAJ_G0018581.1 mouse_genomes_project 11 91368072 91369584 - MGP_CBAJ_P0030943 Ccl3 protein_coding protein_coding MGP_CBAJ_T0012518.1 MGP_CBAJ_G0010630.1 mouse_genomes_project 11 81991176 81995688 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0028550.1 MGP_CBAJ_G0017977.1 mouse_genomes_project 11 53626794 53857696 + MGP_CBAJ_P0028550 Adamts2 protein_coding protein_coding MGP_CBAJ_T0028551.1 MGP_CBAJ_G0017977.1 mouse_genomes_project 11 53627516 53843577 + MGP_CBAJ_P0028551 Adamts2 protein_coding unknown_likely_coding MGP_CBAJ_T0028552.1 MGP_CBAJ_G0017977.1 mouse_genomes_project 11 53818923 53819760 + Adamts2 protein_coding processed_transcript MGP_CBAJ_T0028553.1 MGP_CBAJ_G0017977.1 mouse_genomes_project 11 53824435 53825464 + Adamts2 protein_coding processed_transcript MGP_CBAJ_T0028554.1 MGP_CBAJ_G0017977.1 mouse_genomes_project 11 53840654 53843584 + Adamts2 protein_coding processed_transcript MGP_CBAJ_T0099937.1 MGP_CBAJ_G0038192.1 mouse_genomes_project 11 77959198 77959329 - Gm22927 snoRNA snoRNA MGP_CBAJ_T0006258.1 MGP_CBAJ_G0005212.1 mouse_genomes_project 11 124216539 124241336 + Gm11680 lincRNA lincRNA MGP_CBAJ_T0101567.1 MGP_CBAJ_G0039599.1 mouse_genomes_project 11 111899739 111900643 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0028547.1 MGP_CBAJ_G0017976.1 mouse_genomes_project 11 53400749 53454831 - MGP_CBAJ_P0028547 Rufy1 protein_coding protein_coding MGP_CBAJ_T0028548.1 MGP_CBAJ_G0017976.1 mouse_genomes_project 11 53400836 53431801 - Rufy1 protein_coding processed_transcript MGP_CBAJ_T0028549.1 MGP_CBAJ_G0017976.1 mouse_genomes_project 11 53423189 53445697 - Rufy1 protein_coding processed_transcript MGP_CBAJ_T0027623.1 MGP_CBAJ_G0017743.1 mouse_genomes_project 11 3527348 3635714 - MGP_CBAJ_P0027623 Camk2b protein_coding protein_coding MGP_CBAJ_T0027624.1 MGP_CBAJ_G0017743.1 mouse_genomes_project 11 3527378 3541849 - Camk2b protein_coding processed_transcript MGP_CBAJ_T0027625.1 MGP_CBAJ_G0017743.1 mouse_genomes_project 11 3527382 3635529 - MGP_CBAJ_P0027625 Camk2b protein_coding protein_coding MGP_CBAJ_T0027626.1 MGP_CBAJ_G0017743.1 mouse_genomes_project 11 3527382 3635714 - MGP_CBAJ_P0027626 Camk2b protein_coding protein_coding MGP_CBAJ_T0027627.1 MGP_CBAJ_G0017743.1 mouse_genomes_project 11 3529278 3635529 - MGP_CBAJ_P0027627 Camk2b protein_coding protein_coding MGP_CBAJ_T0027628.1 MGP_CBAJ_G0017743.1 mouse_genomes_project 11 3529379 3635548 - MGP_CBAJ_P0027628 Camk2b protein_coding protein_coding MGP_CBAJ_T0027629.1 MGP_CBAJ_G0017743.1 mouse_genomes_project 11 3529382 3635708 - MGP_CBAJ_P0027629 Camk2b protein_coding protein_coding MGP_CBAJ_T0027630.1 MGP_CBAJ_G0017743.1 mouse_genomes_project 11 3529382 3635511 - MGP_CBAJ_P0027630 Camk2b protein_coding protein_coding MGP_CBAJ_T0027631.1 MGP_CBAJ_G0017743.1 mouse_genomes_project 11 3529390 3635578 - MGP_CBAJ_P0027631 Camk2b protein_coding protein_coding MGP_CBAJ_T0027632.1 MGP_CBAJ_G0017743.1 mouse_genomes_project 11 3529445 3635504 - MGP_CBAJ_P0027632 Camk2b protein_coding protein_coding MGP_CBAJ_T0027633.1 MGP_CBAJ_G0017743.1 mouse_genomes_project 11 3529927 3635536 - MGP_CBAJ_P0027633 Camk2b protein_coding protein_coding MGP_CBAJ_T0027634.1 MGP_CBAJ_G0017743.1 mouse_genomes_project 11 3545811 3635504 - Camk2b protein_coding processed_transcript MGP_CBAJ_T0027635.1 MGP_CBAJ_G0017743.1 mouse_genomes_project 11 3548105 3558159 - Camk2b protein_coding processed_transcript MGP_CBAJ_T0027636.1 MGP_CBAJ_G0017743.1 mouse_genomes_project 11 3550530 3636328 - Camk2b protein_coding processed_transcript MGP_CBAJ_T0027637.1 MGP_CBAJ_G0017743.1 mouse_genomes_project 11 3571552 3635624 - Camk2b protein_coding processed_transcript MGP_CBAJ_T0098690.1 MGP_CBAJ_G0036945.1 mouse_genomes_project 11 65983606 65983713 + Gm25929 snRNA snRNA MGP_CBAJ_T0099953.1 MGP_CBAJ_G0038208.1 mouse_genomes_project 11 105530305 105530520 + Gm24949 snoRNA snoRNA MGP_CBAJ_T0031927.1 MGP_CBAJ_G0018842.1 mouse_genomes_project 11 109975068 109975146 - MGP_CBAJ_P0031927 Gm14180 protein_coding protein_coding MGP_CBAJ_T0098179.1 MGP_CBAJ_G0036452.1 mouse_genomes_project 11 10212187 10212315 - Gm25058 scaRNA scaRNA MGP_CBAJ_T0006284.1 MGP_CBAJ_G0005230.1 mouse_genomes_project 11 132139093 132143419 + Gm26508 lincRNA lincRNA MGP_CBAJ_T0032712.1 MGP_CBAJ_G0019027.1 mouse_genomes_project 11 117733689 117738492 - MGP_CBAJ_P0032712 Icam2 protein_coding protein_coding MGP_CBAJ_T0032713.1 MGP_CBAJ_G0019027.1 mouse_genomes_project 11 117734595 117736512 - MGP_CBAJ_P0032713 Icam2 protein_coding protein_coding MGP_CBAJ_T0032714.1 MGP_CBAJ_G0019027.1 mouse_genomes_project 11 117734841 117743803 - MGP_CBAJ_P0032714 Icam2 protein_coding protein_coding MGP_CBAJ_T0032715.1 MGP_CBAJ_G0019027.1 mouse_genomes_project 11 117736398 117743806 - MGP_CBAJ_P0032715 Icam2 protein_coding protein_coding MGP_CBAJ_T0032716.1 MGP_CBAJ_G0019027.1 mouse_genomes_project 11 117736755 117738707 - Icam2 protein_coding retained_intron MGP_CBAJ_T0028232.1 MGP_CBAJ_G0017888.1 mouse_genomes_project 11 42434854 42448364 - MGP_CBAJ_P0028232 Mat2b protein_coding protein_coding MGP_CBAJ_T0028233.1 MGP_CBAJ_G0017888.1 mouse_genomes_project 11 42434854 42450790 - MGP_CBAJ_P0028233 Mat2b protein_coding protein_coding MGP_CBAJ_T0028234.1 MGP_CBAJ_G0017888.1 mouse_genomes_project 11 42436197 42448211 - MGP_CBAJ_P0028234 Mat2b protein_coding nonsense_mediated_decay MGP_CBAJ_T0028235.1 MGP_CBAJ_G0017888.1 mouse_genomes_project 11 42436251 42440786 - Mat2b protein_coding retained_intron MGP_CBAJ_T0028236.1 MGP_CBAJ_G0017888.1 mouse_genomes_project 11 42440265 42441379 - Mat2b protein_coding retained_intron MGP_CBAJ_T0028237.1 MGP_CBAJ_G0017888.1 mouse_genomes_project 11 42441044 42448218 - Mat2b protein_coding retained_intron MGP_CBAJ_T0028238.1 MGP_CBAJ_G0017888.1 mouse_genomes_project 11 42442898 42450574 - Mat2b protein_coding retained_intron MGP_CBAJ_T0033862.1 MGP_CBAJ_G0019254.1 mouse_genomes_project 11 134399119 134401791 - MGP_CBAJ_P0033862 Cd7 protein_coding protein_coding MGP_CBAJ_T0033863.1 MGP_CBAJ_G0019254.1 mouse_genomes_project 11 134400257 134401791 - Cd7 protein_coding retained_intron MGP_CBAJ_T0032188.1 MGP_CBAJ_G0018917.1 mouse_genomes_project 11 111917526 111927862 + MGP_CBAJ_P0032188 G6pc protein_coding protein_coding MGP_CBAJ_T0027788.1 MGP_CBAJ_G0017779.1 mouse_genomes_project 11 15000318 15031462 + MGP_CBAJ_P0027788 Vstm2a protein_coding protein_coding MGP_CBAJ_T0027789.1 MGP_CBAJ_G0017779.1 mouse_genomes_project 11 15000397 15201691 + MGP_CBAJ_P0027789 Vstm2a protein_coding protein_coding MGP_CBAJ_T0027790.1 MGP_CBAJ_G0017779.1 mouse_genomes_project 11 15000635 15029363 + MGP_CBAJ_P0027790 Vstm2a protein_coding unknown_likely_coding MGP_CBAJ_T0028224.1 MGP_CBAJ_G0017887.1 mouse_genomes_project 11 37170696 38553815 - MGP_CBAJ_P0028224 Tenm2 protein_coding protein_coding MGP_CBAJ_T0028225.1 MGP_CBAJ_G0017887.1 mouse_genomes_project 11 37171698 38213188 - MGP_CBAJ_P0028225 Tenm2 protein_coding protein_coding MGP_CBAJ_T0028226.1 MGP_CBAJ_G0017887.1 mouse_genomes_project 11 37172071 38213188 - MGP_CBAJ_P0028226 Tenm2 protein_coding protein_coding MGP_CBAJ_T0028227.1 MGP_CBAJ_G0017887.1 mouse_genomes_project 11 37317613 38213188 - Tenm2 protein_coding processed_transcript MGP_CBAJ_T0028228.1 MGP_CBAJ_G0017887.1 mouse_genomes_project 11 37318885 37906702 - Tenm2 protein_coding processed_transcript MGP_CBAJ_T0028229.1 MGP_CBAJ_G0017887.1 mouse_genomes_project 11 37345820 37710256 - Tenm2 protein_coding processed_transcript MGP_CBAJ_T0028230.1 MGP_CBAJ_G0017887.1 mouse_genomes_project 11 37590808 37638241 - Tenm2 protein_coding processed_transcript MGP_CBAJ_T0028231.1 MGP_CBAJ_G0017887.1 mouse_genomes_project 11 38213226 38553897 - Tenm2 protein_coding processed_transcript MGP_CBAJ_T0011190.1 MGP_CBAJ_G0009328.1 mouse_genomes_project 11 116341305 116341401 + Gm24290 misc_RNA misc_RNA MGP_CBAJ_T0030667.1 MGP_CBAJ_G0018499.1 mouse_genomes_project 11 85377420 85394058 + MGP_CBAJ_P0030667 Pigs protein_coding unknown_likely_coding MGP_CBAJ_T0031936.1 MGP_CBAJ_G0018851.1 mouse_genomes_project 11 110309851 110310880 - MGP_CBAJ_P0031936 Krtap29-1 protein_coding protein_coding MGP_CBAJ_T0029087.1 MGP_CBAJ_G0018141.1 mouse_genomes_project 11 64720603 64860571 - MGP_CBAJ_P0029087 Tom1l2 protein_coding protein_coding MGP_CBAJ_T0029088.1 MGP_CBAJ_G0018141.1 mouse_genomes_project 11 64720604 64733116 - Tom1l2 protein_coding processed_transcript MGP_CBAJ_T0029089.1 MGP_CBAJ_G0018141.1 mouse_genomes_project 11 64720604 64860571 - MGP_CBAJ_P0029089 Tom1l2 protein_coding protein_coding MGP_CBAJ_T0029090.1 MGP_CBAJ_G0018141.1 mouse_genomes_project 11 64720604 64860571 - MGP_CBAJ_P0029090 Tom1l2 protein_coding protein_coding MGP_CBAJ_T0029091.1 MGP_CBAJ_G0018141.1 mouse_genomes_project 11 64720604 64860571 - MGP_CBAJ_P0029091 Tom1l2 protein_coding protein_coding MGP_CBAJ_T0029092.1 MGP_CBAJ_G0018141.1 mouse_genomes_project 11 64723490 64725235 - Tom1l2 protein_coding processed_transcript MGP_CBAJ_T0029093.1 MGP_CBAJ_G0018141.1 mouse_genomes_project 11 64723789 64747956 - MGP_CBAJ_P0029093 Tom1l2 protein_coding protein_coding MGP_CBAJ_T0029094.1 MGP_CBAJ_G0018141.1 mouse_genomes_project 11 64723789 64747448 - MGP_CBAJ_P0029094 Tom1l2 protein_coding protein_coding MGP_CBAJ_T0029095.1 MGP_CBAJ_G0018141.1 mouse_genomes_project 11 64739825 64860571 - MGP_CBAJ_P0029095 Tom1l2 protein_coding protein_coding MGP_CBAJ_T0029096.1 MGP_CBAJ_G0018141.1 mouse_genomes_project 11 64740192 64860571 - MGP_CBAJ_P0029096 Tom1l2 protein_coding protein_coding MGP_CBAJ_T0029097.1 MGP_CBAJ_G0018141.1 mouse_genomes_project 11 64755246 64860571 - Tom1l2 protein_coding processed_transcript MGP_CBAJ_T0012612.1 MGP_CBAJ_G0010724.1 mouse_genomes_project 11 127369764 127370168 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0032096.1 MGP_CBAJ_G0018898.1 mouse_genomes_project 11 111572343 111576397 + MGP_CBAJ_P0032096 Coasy protein_coding protein_coding MGP_CBAJ_T0032097.1 MGP_CBAJ_G0018898.1 mouse_genomes_project 11 111572396 111575398 + Coasy protein_coding processed_transcript MGP_CBAJ_T0032098.1 MGP_CBAJ_G0018898.1 mouse_genomes_project 11 111572403 111576397 + MGP_CBAJ_P0032098 Coasy protein_coding protein_coding MGP_CBAJ_T0032099.1 MGP_CBAJ_G0018898.1 mouse_genomes_project 11 111573673 111574958 + Coasy protein_coding processed_transcript MGP_CBAJ_T0000813.1 MGP_CBAJ_G0000749.1 mouse_genomes_project 11 47504691 47504994 - TEC TEC MGP_CBAJ_T0006127.1 MGP_CBAJ_G0005109.1 mouse_genomes_project 11 34072265 34089707 + Gm12116 lincRNA lincRNA MGP_CBAJ_T0031531.1 MGP_CBAJ_G0018725.1 mouse_genomes_project 11 105667678 105696736 + MGP_CBAJ_P0031531 Ttll6 protein_coding protein_coding MGP_CBAJ_T0031532.1 MGP_CBAJ_G0018725.1 mouse_genomes_project 11 105667678 105706952 + MGP_CBAJ_P0031532 Ttll6 protein_coding protein_coding MGP_CBAJ_T0032412.1 MGP_CBAJ_G0018957.1 mouse_genomes_project 11 113208481 113225144 - MGP_CBAJ_P0032412 Itga2b protein_coding protein_coding MGP_CBAJ_T0032413.1 MGP_CBAJ_G0018957.1 mouse_genomes_project 11 113208488 113211380 - Itga2b protein_coding processed_transcript MGP_CBAJ_T0032414.1 MGP_CBAJ_G0018957.1 mouse_genomes_project 11 113211028 113212551 - Itga2b protein_coding processed_transcript MGP_CBAJ_T0032415.1 MGP_CBAJ_G0018957.1 mouse_genomes_project 11 113211086 113213796 - Itga2b protein_coding processed_transcript MGP_CBAJ_T0032416.1 MGP_CBAJ_G0018957.1 mouse_genomes_project 11 113211661 113222460 - Itga2b protein_coding processed_transcript MGP_CBAJ_T0032417.1 MGP_CBAJ_G0018957.1 mouse_genomes_project 11 113212430 113213590 - Itga2b protein_coding processed_transcript MGP_CBAJ_T0032418.1 MGP_CBAJ_G0018957.1 mouse_genomes_project 11 113212740 113216066 - Itga2b protein_coding processed_transcript MGP_CBAJ_T0032419.1 MGP_CBAJ_G0018957.1 mouse_genomes_project 11 113216442 113217168 - Itga2b protein_coding processed_transcript MGP_CBAJ_T0032420.1 MGP_CBAJ_G0018957.1 mouse_genomes_project 11 113221517 113222216 - Itga2b protein_coding processed_transcript MGP_CBAJ_T0032421.1 MGP_CBAJ_G0018957.1 mouse_genomes_project 11 113223060 113225383 - Itga2b protein_coding processed_transcript MGP_CBAJ_T0012457.1 MGP_CBAJ_G0010569.1 mouse_genomes_project 11 57937565 57937825 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0033026.1 MGP_CBAJ_G0019096.1 mouse_genomes_project 11 127678016 127740687 + MGP_CBAJ_P0033026 Tmem104 protein_coding protein_coding MGP_CBAJ_T0033027.1 MGP_CBAJ_G0019096.1 mouse_genomes_project 11 127678016 127740687 + MGP_CBAJ_P0033027 Tmem104 protein_coding protein_coding MGP_CBAJ_T0033028.1 MGP_CBAJ_G0019096.1 mouse_genomes_project 11 127678040 127687981 + Tmem104 protein_coding processed_transcript MGP_CBAJ_T0033029.1 MGP_CBAJ_G0019096.1 mouse_genomes_project 11 127678080 127739429 + Tmem104 protein_coding processed_transcript MGP_CBAJ_T0027474.1 MGP_CBAJ_G0017708.1 mouse_genomes_project 11 1479891 1484076 + MGP_CBAJ_P0027474 Gatsl3 protein_coding protein_coding MGP_CBAJ_T0028420.1 MGP_CBAJ_G0017943.1 mouse_genomes_project 11 51936685 51938779 - MGP_CBAJ_P0028420 protein_coding protein_coding MGP_CBAJ_T0012582.1 MGP_CBAJ_G0010694.1 mouse_genomes_project 11 113249914 113250085 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009632.1 MGP_CBAJ_G0007770.1 mouse_genomes_project 11 113153680 113153748 - Mir6930 miRNA miRNA MGP_CBAJ_T0003099.1 MGP_CBAJ_G0002880.1 mouse_genomes_project 11 59058328 59065838 - Slc36a1os antisense antisense MGP_CBAJ_T0003100.1 MGP_CBAJ_G0002880.1 mouse_genomes_project 11 59061248 59066020 - Slc36a1os antisense antisense MGP_CBAJ_T0033880.1 MGP_CBAJ_G0019260.1 mouse_genomes_project 11 134564443 134591182 - MGP_CBAJ_P0033880 Ogfod3 protein_coding protein_coding MGP_CBAJ_T0028826.1 MGP_CBAJ_G0018048.1 mouse_genomes_project 11 58722420 58779597 - MGP_CBAJ_P0028826 Tnip1 protein_coding protein_coding MGP_CBAJ_T0028827.1 MGP_CBAJ_G0018048.1 mouse_genomes_project 11 58722422 58779579 - Tnip1 protein_coding processed_transcript MGP_CBAJ_T0028828.1 MGP_CBAJ_G0018048.1 mouse_genomes_project 11 58722422 58786375 - MGP_CBAJ_P0028828 Tnip1 protein_coding protein_coding MGP_CBAJ_T0028829.1 MGP_CBAJ_G0018048.1 mouse_genomes_project 11 58722422 58786371 - MGP_CBAJ_P0028829 Tnip1 protein_coding protein_coding MGP_CBAJ_T0028830.1 MGP_CBAJ_G0018048.1 mouse_genomes_project 11 58722422 58786376 - MGP_CBAJ_P0028830 Tnip1 protein_coding protein_coding MGP_CBAJ_T0028831.1 MGP_CBAJ_G0018048.1 mouse_genomes_project 11 58722422 58786369 - MGP_CBAJ_P0028831 Tnip1 protein_coding protein_coding MGP_CBAJ_T0028832.1 MGP_CBAJ_G0018048.1 mouse_genomes_project 11 58722424 58786368 - MGP_CBAJ_P0028832 Tnip1 protein_coding protein_coding MGP_CBAJ_T0028833.1 MGP_CBAJ_G0018048.1 mouse_genomes_project 11 58730247 58732711 - Tnip1 protein_coding retained_intron MGP_CBAJ_T0028834.1 MGP_CBAJ_G0018048.1 mouse_genomes_project 11 58738329 58779597 - MGP_CBAJ_P0028834 Tnip1 protein_coding protein_coding MGP_CBAJ_T0028835.1 MGP_CBAJ_G0018048.1 mouse_genomes_project 11 58745654 58779522 - MGP_CBAJ_P0028835 Tnip1 protein_coding protein_coding MGP_CBAJ_T0028836.1 MGP_CBAJ_G0018048.1 mouse_genomes_project 11 58756856 58779562 - Tnip1 protein_coding processed_transcript MGP_CBAJ_T0028837.1 MGP_CBAJ_G0018048.1 mouse_genomes_project 11 58756910 58786368 - Tnip1 protein_coding processed_transcript MGP_CBAJ_T0032279.1 MGP_CBAJ_G0018937.1 mouse_genomes_project 11 112680301 112709432 - Mpp3 protein_coding processed_transcript MGP_CBAJ_T0032280.1 MGP_CBAJ_G0018937.1 mouse_genomes_project 11 112680301 112708592 - MGP_CBAJ_P0032280 Mpp3 protein_coding protein_coding MGP_CBAJ_T0032281.1 MGP_CBAJ_G0018937.1 mouse_genomes_project 11 112680301 112711456 - MGP_CBAJ_P0032281 Mpp3 protein_coding protein_coding MGP_CBAJ_T0032282.1 MGP_CBAJ_G0018937.1 mouse_genomes_project 11 112680301 112709453 - MGP_CBAJ_P0032282 Mpp3 protein_coding protein_coding MGP_CBAJ_T0032283.1 MGP_CBAJ_G0018937.1 mouse_genomes_project 11 112689287 112691057 - Mpp3 protein_coding retained_intron MGP_CBAJ_T0032284.1 MGP_CBAJ_G0018937.1 mouse_genomes_project 11 112697979 112709435 - MGP_CBAJ_P0032284 Mpp3 protein_coding protein_coding MGP_CBAJ_T0032285.1 MGP_CBAJ_G0018937.1 mouse_genomes_project 11 112703599 112709432 - Mpp3 protein_coding processed_transcript MGP_CBAJ_T0032286.1 MGP_CBAJ_G0018937.1 mouse_genomes_project 11 112705931 112708355 - Mpp3 protein_coding processed_transcript MGP_CBAJ_T0032287.1 MGP_CBAJ_G0018937.1 mouse_genomes_project 11 112707884 112709253 - Mpp3 protein_coding processed_transcript MGP_CBAJ_T0029622.1 MGP_CBAJ_G0018255.1 mouse_genomes_project 11 75096003 75101341 - Chd3 protein_coding retained_intron MGP_CBAJ_T0029623.1 MGP_CBAJ_G0018255.1 mouse_genomes_project 11 75096003 75098750 - Chd3 protein_coding retained_intron MGP_CBAJ_T0029624.1 MGP_CBAJ_G0018255.1 mouse_genomes_project 11 75096003 75124178 - MGP_CBAJ_P0029624 Chd3 protein_coding protein_coding MGP_CBAJ_T0029625.1 MGP_CBAJ_G0018255.1 mouse_genomes_project 11 75097081 75124127 - MGP_CBAJ_P0029625 Chd3 protein_coding protein_coding MGP_CBAJ_T0029626.1 MGP_CBAJ_G0018255.1 mouse_genomes_project 11 75097866 75119535 - MGP_CBAJ_P0029626 Chd3 protein_coding protein_coding MGP_CBAJ_T0029627.1 MGP_CBAJ_G0018255.1 mouse_genomes_project 11 75098866 75099865 - Chd3 protein_coding retained_intron MGP_CBAJ_T0029628.1 MGP_CBAJ_G0018255.1 mouse_genomes_project 11 75106602 75107200 - Chd3 protein_coding retained_intron MGP_CBAJ_T0029629.1 MGP_CBAJ_G0018255.1 mouse_genomes_project 11 75107195 75111401 - MGP_CBAJ_P0029629 Chd3 protein_coding protein_coding MGP_CBAJ_T0029630.1 MGP_CBAJ_G0018255.1 mouse_genomes_project 11 75115497 75116512 - MGP_CBAJ_P0029630 Chd3 protein_coding protein_coding MGP_CBAJ_T0029631.1 MGP_CBAJ_G0018255.1 mouse_genomes_project 11 75115514 75116512 - MGP_CBAJ_P0029631 Chd3 protein_coding protein_coding MGP_CBAJ_T0031210.1 MGP_CBAJ_G0018643.1 mouse_genomes_project 11 96178738 96179822 - MGP_CBAJ_P0031210 Olfr464 protein_coding protein_coding MGP_CBAJ_T0031211.1 MGP_CBAJ_G0018643.1 mouse_genomes_project 11 96179383 96181322 - MGP_CBAJ_P0031211 Olfr464 protein_coding protein_coding MGP_CBAJ_T0031110.1 MGP_CBAJ_G0018618.1 mouse_genomes_project 11 94744697 94753174 + MGP_CBAJ_P0031110 Ptrh2 protein_coding protein_coding MGP_CBAJ_T0031111.1 MGP_CBAJ_G0018618.1 mouse_genomes_project 11 94744697 94753174 + MGP_CBAJ_P0031111 Ptrh2 protein_coding protein_coding MGP_CBAJ_T0027642.1 MGP_CBAJ_G0017745.1 mouse_genomes_project 11 3782417 3784032 + MGP_CBAJ_P0027642 A730071L15Rik protein_coding protein_coding MGP_CBAJ_T0027863.1 MGP_CBAJ_G0017800.1 mouse_genomes_project 11 20516874 20609603 + MGP_CBAJ_P0027863 Vps54 protein_coding protein_coding MGP_CBAJ_T0027864.1 MGP_CBAJ_G0017800.1 mouse_genomes_project 11 20516874 20609617 + MGP_CBAJ_P0027864 Vps54 protein_coding protein_coding MGP_CBAJ_T0027865.1 MGP_CBAJ_G0017800.1 mouse_genomes_project 11 20552750 20608806 + MGP_CBAJ_P0027865 Vps54 protein_coding protein_coding MGP_CBAJ_T0027866.1 MGP_CBAJ_G0017800.1 mouse_genomes_project 11 20561850 20575938 + Vps54 protein_coding processed_transcript MGP_CBAJ_T0027867.1 MGP_CBAJ_G0017800.1 mouse_genomes_project 11 20585610 20594233 + Vps54 protein_coding processed_transcript MGP_CBAJ_T0027868.1 MGP_CBAJ_G0017800.1 mouse_genomes_project 11 20600961 20603450 + Vps54 protein_coding processed_transcript MGP_CBAJ_T0027869.1 MGP_CBAJ_G0017800.1 mouse_genomes_project 11 20602537 20609018 + Vps54 protein_coding processed_transcript MGP_CBAJ_T0032146.1 MGP_CBAJ_G0018909.1 mouse_genomes_project 11 111773132 111779126 + MGP_CBAJ_P0032146 Vps25 protein_coding protein_coding MGP_CBAJ_T0032147.1 MGP_CBAJ_G0018909.1 mouse_genomes_project 11 111773132 111780626 + MGP_CBAJ_P0032147 Vps25 protein_coding protein_coding MGP_CBAJ_T0032148.1 MGP_CBAJ_G0018909.1 mouse_genomes_project 11 111773154 111780622 + MGP_CBAJ_P0032148 Vps25 protein_coding protein_coding MGP_CBAJ_T0032149.1 MGP_CBAJ_G0018909.1 mouse_genomes_project 11 111773155 111779993 + MGP_CBAJ_P0032149 Vps25 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032150.1 MGP_CBAJ_G0018909.1 mouse_genomes_project 11 111773160 111780400 + MGP_CBAJ_P0032150 Vps25 protein_coding protein_coding MGP_CBAJ_T0032151.1 MGP_CBAJ_G0018909.1 mouse_genomes_project 11 111773178 111780133 + MGP_CBAJ_P0032151 Vps25 protein_coding protein_coding MGP_CBAJ_T0032152.1 MGP_CBAJ_G0018909.1 mouse_genomes_project 11 111773189 111780287 + Vps25 protein_coding retained_intron MGP_CBAJ_T0031624.1 MGP_CBAJ_G0018751.1 mouse_genomes_project 11 106837876 106851415 - MGP_CBAJ_P0031624 Tbkbp1 protein_coding protein_coding MGP_CBAJ_T0031625.1 MGP_CBAJ_G0018751.1 mouse_genomes_project 11 106837878 106851415 - MGP_CBAJ_P0031625 Tbkbp1 protein_coding protein_coding MGP_CBAJ_T0031626.1 MGP_CBAJ_G0018751.1 mouse_genomes_project 11 106837882 106851749 - MGP_CBAJ_P0031626 Tbkbp1 protein_coding protein_coding MGP_CBAJ_T0031627.1 MGP_CBAJ_G0018751.1 mouse_genomes_project 11 106838804 106852739 - MGP_CBAJ_P0031627 Tbkbp1 protein_coding protein_coding MGP_CBAJ_T0031628.1 MGP_CBAJ_G0018751.1 mouse_genomes_project 11 106840111 106851751 - MGP_CBAJ_P0031628 Tbkbp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032655.1 MGP_CBAJ_G0019010.1 mouse_genomes_project 11 117321622 117342256 + MGP_CBAJ_P0032655 Kcnh6 protein_coding protein_coding MGP_CBAJ_T0032656.1 MGP_CBAJ_G0019010.1 mouse_genomes_project 11 117321671 117342698 + MGP_CBAJ_P0032656 Kcnh6 protein_coding protein_coding MGP_CBAJ_T0032657.1 MGP_CBAJ_G0019010.1 mouse_genomes_project 11 117321701 117342213 + MGP_CBAJ_P0032657 Kcnh6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032658.1 MGP_CBAJ_G0019010.1 mouse_genomes_project 11 117327270 117330970 + Kcnh6 protein_coding processed_transcript MGP_CBAJ_T0016956.1 MGP_CBAJ_G0014923.1 mouse_genomes_project 11 81716191 81721253 + 1700016P03Rik processed_transcript processed_transcript MGP_CBAJ_T0033054.1 MGP_CBAJ_G0019105.1 mouse_genomes_project 11 127917254 127926177 + MGP_CBAJ_P0033054 Ict1 protein_coding protein_coding MGP_CBAJ_T0033055.1 MGP_CBAJ_G0019105.1 mouse_genomes_project 11 127917256 127926165 + MGP_CBAJ_P0033055 Ict1 protein_coding protein_coding MGP_CBAJ_T0033056.1 MGP_CBAJ_G0019105.1 mouse_genomes_project 11 127917259 127924422 + MGP_CBAJ_P0033056 Ict1 protein_coding protein_coding MGP_CBAJ_T0033057.1 MGP_CBAJ_G0019105.1 mouse_genomes_project 11 127917269 127923556 + Ict1 protein_coding retained_intron MGP_CBAJ_T0033058.1 MGP_CBAJ_G0019105.1 mouse_genomes_project 11 127917273 127923764 + MGP_CBAJ_P0033058 Ict1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033059.1 MGP_CBAJ_G0019105.1 mouse_genomes_project 11 127917279 127924262 + Ict1 protein_coding processed_transcript MGP_CBAJ_T0033060.1 MGP_CBAJ_G0019105.1 mouse_genomes_project 11 127917284 127923754 + Ict1 protein_coding retained_intron MGP_CBAJ_T0033061.1 MGP_CBAJ_G0019105.1 mouse_genomes_project 11 127917324 127924227 + Ict1 protein_coding processed_transcript MGP_CBAJ_T0033062.1 MGP_CBAJ_G0019105.1 mouse_genomes_project 11 127923363 127924222 + Ict1 protein_coding retained_intron MGP_CBAJ_T0033063.1 MGP_CBAJ_G0019105.1 mouse_genomes_project 11 127923662 127924411 + Ict1 protein_coding retained_intron MGP_CBAJ_T0031269.1 MGP_CBAJ_G0018661.1 mouse_genomes_project 11 98609083 98631582 - MGP_CBAJ_P0031269 Pctp protein_coding protein_coding MGP_CBAJ_T0012396.1 MGP_CBAJ_G0010508.1 mouse_genomes_project 11 30156701 30157173 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0029741.1 MGP_CBAJ_G0018286.1 mouse_genomes_project 11 75684537 75685637 + MGP_CBAJ_P0029741 Tmem256 protein_coding protein_coding MGP_CBAJ_T0029742.1 MGP_CBAJ_G0018286.1 mouse_genomes_project 11 75684547 75685642 + MGP_CBAJ_P0029742 Tmem256 protein_coding protein_coding MGP_CBAJ_T0029743.1 MGP_CBAJ_G0018286.1 mouse_genomes_project 11 75684578 75685471 + Tmem256 protein_coding processed_transcript MGP_CBAJ_T0029744.1 MGP_CBAJ_G0018286.1 mouse_genomes_project 11 75684586 75685636 + Tmem256 protein_coding processed_transcript MGP_CBAJ_T0029745.1 MGP_CBAJ_G0018286.1 mouse_genomes_project 11 75684661 75685597 + Tmem256 protein_coding processed_transcript MGP_CBAJ_T0003090.1 MGP_CBAJ_G0002872.1 mouse_genomes_project 11 56590070 56601812 - Gm11186 antisense antisense MGP_CBAJ_T0006288.1 MGP_CBAJ_G0005234.1 mouse_genomes_project 11 132288654 132293960 + lincRNA lincRNA MGP_CBAJ_T0027968.1 MGP_CBAJ_G0017823.1 mouse_genomes_project 11 23689127 23714960 - MGP_CBAJ_P0027968 A830031A19Rik protein_coding protein_coding MGP_CBAJ_T0031216.1 MGP_CBAJ_G0018645.1 mouse_genomes_project 11 96386177 96392555 + MGP_CBAJ_P0031216 Srsf1 protein_coding protein_coding MGP_CBAJ_T0031217.1 MGP_CBAJ_G0018645.1 mouse_genomes_project 11 96386523 96390296 + MGP_CBAJ_P0031217 Srsf1 protein_coding protein_coding MGP_CBAJ_T0031218.1 MGP_CBAJ_G0018645.1 mouse_genomes_project 11 96386530 96387634 + Srsf1 protein_coding retained_intron MGP_CBAJ_T0031219.1 MGP_CBAJ_G0018645.1 mouse_genomes_project 11 96386610 96389217 + MGP_CBAJ_P0031219 Srsf1 protein_coding protein_coding MGP_CBAJ_T0031220.1 MGP_CBAJ_G0018645.1 mouse_genomes_project 11 96387374 96390278 + MGP_CBAJ_P0031220 Srsf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031221.1 MGP_CBAJ_G0018645.1 mouse_genomes_project 11 96387396 96389929 + MGP_CBAJ_P0031221 Srsf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031222.1 MGP_CBAJ_G0018645.1 mouse_genomes_project 11 96388219 96389858 + Srsf1 protein_coding retained_intron MGP_CBAJ_T0032196.1 MGP_CBAJ_G0018920.1 mouse_genomes_project 11 111987871 111993692 - MGP_CBAJ_P0032196 Ptges3l protein_coding unknown_likely_coding MGP_CBAJ_T0032197.1 MGP_CBAJ_G0018920.1 mouse_genomes_project 11 111987880 111994402 - MGP_CBAJ_P0032197 Ptges3l protein_coding protein_coding MGP_CBAJ_T0032198.1 MGP_CBAJ_G0018920.1 mouse_genomes_project 11 111987880 111993738 - MGP_CBAJ_P0032198 Ptges3l protein_coding protein_coding MGP_CBAJ_T0032199.1 MGP_CBAJ_G0018920.1 mouse_genomes_project 11 111989939 111993738 - MGP_CBAJ_P0032199 Ptges3l protein_coding protein_coding MGP_CBAJ_T0032200.1 MGP_CBAJ_G0018920.1 mouse_genomes_project 11 111990486 111992925 - MGP_CBAJ_P0032200 Ptges3l protein_coding protein_coding MGP_CBAJ_T0032201.1 MGP_CBAJ_G0018920.1 mouse_genomes_project 11 111990900 111993301 - Ptges3l protein_coding retained_intron MGP_CBAJ_T0027545.1 MGP_CBAJ_G0017725.1 mouse_genomes_project 11 2455298 2495483 - MGP_CBAJ_P0027545 protein_coding protein_coding MGP_CBAJ_T0027546.1 MGP_CBAJ_G0017725.1 mouse_genomes_project 11 2455307 2495284 - MGP_CBAJ_P0027546 protein_coding protein_coding MGP_CBAJ_T0027547.1 MGP_CBAJ_G0017725.1 mouse_genomes_project 11 2455506 2495259 - MGP_CBAJ_P0027547 protein_coding protein_coding MGP_CBAJ_T0027548.1 MGP_CBAJ_G0017725.1 mouse_genomes_project 11 2455583 2456501 - protein_coding processed_transcript MGP_CBAJ_T0027549.1 MGP_CBAJ_G0017725.1 mouse_genomes_project 11 2457227 2470850 - protein_coding processed_transcript MGP_CBAJ_T0027550.1 MGP_CBAJ_G0017725.1 mouse_genomes_project 11 2457537 2469843 - protein_coding processed_transcript MGP_CBAJ_T0027551.1 MGP_CBAJ_G0017725.1 mouse_genomes_project 11 2457640 2471221 - protein_coding processed_transcript MGP_CBAJ_T0027552.1 MGP_CBAJ_G0017725.1 mouse_genomes_project 11 2457640 2473662 - protein_coding processed_transcript MGP_CBAJ_T0027553.1 MGP_CBAJ_G0017725.1 mouse_genomes_project 11 2471739 2495283 - MGP_CBAJ_P0027553 protein_coding protein_coding MGP_CBAJ_T0027554.1 MGP_CBAJ_G0017725.1 mouse_genomes_project 11 2473343 2482252 - protein_coding processed_transcript MGP_CBAJ_T0027555.1 MGP_CBAJ_G0017725.1 mouse_genomes_project 11 2486674 2495313 - MGP_CBAJ_P0027555 protein_coding protein_coding MGP_CBAJ_T0027556.1 MGP_CBAJ_G0017725.1 mouse_genomes_project 11 2489747 2495284 - protein_coding processed_transcript MGP_CBAJ_T0027778.1 MGP_CBAJ_G0017778.1 mouse_genomes_project 11 10547446 10792840 - MGP_CBAJ_P0027778 Cobl protein_coding protein_coding MGP_CBAJ_T0027779.1 MGP_CBAJ_G0017778.1 mouse_genomes_project 11 10547514 10792895 - MGP_CBAJ_P0027779 Cobl protein_coding protein_coding MGP_CBAJ_T0027780.1 MGP_CBAJ_G0017778.1 mouse_genomes_project 11 10547514 10792993 - MGP_CBAJ_P0027780 Cobl protein_coding protein_coding MGP_CBAJ_T0027781.1 MGP_CBAJ_G0017778.1 mouse_genomes_project 11 10547516 10738572 - MGP_CBAJ_P0027781 Cobl protein_coding protein_coding MGP_CBAJ_T0027782.1 MGP_CBAJ_G0017778.1 mouse_genomes_project 11 10547516 10792996 - MGP_CBAJ_P0027782 Cobl protein_coding protein_coding MGP_CBAJ_T0027783.1 MGP_CBAJ_G0017778.1 mouse_genomes_project 11 10547949 10792836 - MGP_CBAJ_P0027783 Cobl protein_coding nonsense_mediated_decay MGP_CBAJ_T0027784.1 MGP_CBAJ_G0017778.1 mouse_genomes_project 11 10577730 10692835 - MGP_CBAJ_P0027784 Cobl protein_coding protein_coding MGP_CBAJ_T0027785.1 MGP_CBAJ_G0017778.1 mouse_genomes_project 11 10614478 10692783 - MGP_CBAJ_P0027785 Cobl protein_coding protein_coding MGP_CBAJ_T0027786.1 MGP_CBAJ_G0017778.1 mouse_genomes_project 11 10625446 10792788 - Cobl protein_coding retained_intron MGP_CBAJ_T0027787.1 MGP_CBAJ_G0017778.1 mouse_genomes_project 11 10666781 10703192 - MGP_CBAJ_P0027787 Cobl protein_coding protein_coding MGP_CBAJ_T0032935.1 MGP_CBAJ_G0019073.1 mouse_genomes_project 11 125971358 125981805 + MGP_CBAJ_P0032935 D11Wsu47e protein_coding protein_coding MGP_CBAJ_T0032936.1 MGP_CBAJ_G0019073.1 mouse_genomes_project 11 125971386 125975183 + MGP_CBAJ_P0032936 D11Wsu47e protein_coding protein_coding MGP_CBAJ_T0032937.1 MGP_CBAJ_G0019073.1 mouse_genomes_project 11 125971393 125981805 + MGP_CBAJ_P0032937 D11Wsu47e protein_coding protein_coding MGP_CBAJ_T0032938.1 MGP_CBAJ_G0019073.1 mouse_genomes_project 11 125972032 125975098 + MGP_CBAJ_P0032938 D11Wsu47e protein_coding protein_coding MGP_CBAJ_T0028411.1 MGP_CBAJ_G0017939.1 mouse_genomes_project 11 51857700 51868768 - MGP_CBAJ_P0028411 protein_coding protein_coding MGP_CBAJ_T0028413.1 MGP_CBAJ_G0017939.1 mouse_genomes_project 11 51860225 51877076 - protein_coding processed_transcript MGP_CBAJ_T0098182.1 MGP_CBAJ_G0036455.1 mouse_genomes_project 11 95063171 95063302 - Gm22387 scaRNA scaRNA MGP_CBAJ_T0030949.1 MGP_CBAJ_G0018585.1 mouse_genomes_project 11 91475169 91480874 + MGP_CBAJ_P0030949 Wfdc21 protein_coding protein_coding MGP_CBAJ_T0099967.1 MGP_CBAJ_G0038222.1 mouse_genomes_project 11 129432498 129432572 + Snord1a snoRNA snoRNA MGP_CBAJ_T0006185.1 MGP_CBAJ_G0005160.1 mouse_genomes_project 11 78044689 78056339 - 4930401O10Rik lincRNA lincRNA MGP_CBAJ_T0028896.1 MGP_CBAJ_G0018070.1 mouse_genomes_project 11 62316512 62369694 - MGP_CBAJ_P0028896 Gemin5 protein_coding protein_coding MGP_CBAJ_T0028897.1 MGP_CBAJ_G0018070.1 mouse_genomes_project 11 62317800 62369694 - MGP_CBAJ_P0028897 Gemin5 protein_coding protein_coding MGP_CBAJ_T0028898.1 MGP_CBAJ_G0018070.1 mouse_genomes_project 11 62317800 62369694 - MGP_CBAJ_P0028898 Gemin5 protein_coding protein_coding MGP_CBAJ_T0028899.1 MGP_CBAJ_G0018070.1 mouse_genomes_project 11 62335736 62338416 - Gemin5 protein_coding processed_transcript MGP_CBAJ_T0028900.1 MGP_CBAJ_G0018070.1 mouse_genomes_project 11 62353751 62361928 - MGP_CBAJ_P0028900 Gemin5 protein_coding protein_coding MGP_CBAJ_T0101262.1 MGP_CBAJ_G0039393.1 mouse_genomes_project 11 79713024 79716927 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101263.1 MGP_CBAJ_G0039393.1 mouse_genomes_project 11 79713226 79720362 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0099906.1 MGP_CBAJ_G0038161.1 mouse_genomes_project 11 14112498 14112628 + Gm25490 snoRNA snoRNA MGP_CBAJ_T0012622.1 MGP_CBAJ_G0010734.1 mouse_genomes_project 11 131204395 131204863 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011174.1 MGP_CBAJ_G0009312.1 mouse_genomes_project 11 54470956 54471211 + Gm25082 misc_RNA misc_RNA MGP_CBAJ_T0012499.1 MGP_CBAJ_G0010611.1 mouse_genomes_project 11 75818839 75819331 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0028202.1 MGP_CBAJ_G0017880.1 mouse_genomes_project 11 35357809 35482692 + MGP_CBAJ_P0028202 Fam196b protein_coding protein_coding MGP_CBAJ_T0028203.1 MGP_CBAJ_G0017880.1 mouse_genomes_project 11 35357809 35482691 + MGP_CBAJ_P0028203 Fam196b protein_coding protein_coding MGP_CBAJ_T0030241.1 MGP_CBAJ_G0018402.1 mouse_genomes_project 11 80257278 80258217 - MGP_CBAJ_P0030241 Olfr395 protein_coding protein_coding MGP_CBAJ_T0033491.1 MGP_CBAJ_G0019184.1 mouse_genomes_project 11 131302217 131354481 - MGP_CBAJ_P0033491 Timp2 protein_coding protein_coding MGP_CBAJ_T0027713.1 MGP_CBAJ_G0017764.1 mouse_genomes_project 11 6306911 6569119 - MGP_CBAJ_P0027713 Tns3 protein_coding protein_coding MGP_CBAJ_T0027714.1 MGP_CBAJ_G0017764.1 mouse_genomes_project 11 6326317 6346377 - Tns3 protein_coding processed_transcript MGP_CBAJ_T0027715.1 MGP_CBAJ_G0017764.1 mouse_genomes_project 11 6417833 6425649 - Tns3 protein_coding processed_transcript MGP_CBAJ_T0027716.1 MGP_CBAJ_G0017764.1 mouse_genomes_project 11 6425989 6459411 - Tns3 protein_coding processed_transcript MGP_CBAJ_T0033671.1 MGP_CBAJ_G0019218.1 mouse_genomes_project 11 133649461 133717097 - MGP_CBAJ_P0033671 Nploc4 protein_coding protein_coding MGP_CBAJ_T0033672.1 MGP_CBAJ_G0019218.1 mouse_genomes_project 11 133649461 133717097 - MGP_CBAJ_P0033672 Nploc4 protein_coding protein_coding MGP_CBAJ_T0033673.1 MGP_CBAJ_G0019218.1 mouse_genomes_project 11 133651409 133652595 - Nploc4 protein_coding processed_transcript MGP_CBAJ_T0033674.1 MGP_CBAJ_G0019218.1 mouse_genomes_project 11 133677254 133698709 - Nploc4 protein_coding processed_transcript MGP_CBAJ_T0033675.1 MGP_CBAJ_G0019218.1 mouse_genomes_project 11 133686639 133691963 - Nploc4 protein_coding processed_transcript MGP_CBAJ_T0031720.1 MGP_CBAJ_G0018771.1 mouse_genomes_project 11 107791405 107861871 - MGP_CBAJ_P0031720 Plxdc1 protein_coding protein_coding MGP_CBAJ_T0031721.1 MGP_CBAJ_G0018771.1 mouse_genomes_project 11 107791823 107861826 - MGP_CBAJ_P0031721 Plxdc1 protein_coding protein_coding MGP_CBAJ_T0031722.1 MGP_CBAJ_G0018771.1 mouse_genomes_project 11 107805351 107861860 - Plxdc1 protein_coding processed_transcript MGP_CBAJ_T0031723.1 MGP_CBAJ_G0018771.1 mouse_genomes_project 11 107854023 107861857 - MGP_CBAJ_P0031723 Plxdc1 protein_coding protein_coding MGP_CBAJ_T0012589.1 MGP_CBAJ_G0010701.1 mouse_genomes_project 11 115948907 115949982 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0033077.1 MGP_CBAJ_G0019108.1 mouse_genomes_project 11 127957624 127965346 + MGP_CBAJ_P0033077 Trim80 protein_coding protein_coding MGP_CBAJ_T0029837.1 MGP_CBAJ_G0018304.1 mouse_genomes_project 11 75896146 75930123 + MGP_CBAJ_P0029837 Dlg4 protein_coding protein_coding MGP_CBAJ_T0029838.1 MGP_CBAJ_G0018304.1 mouse_genomes_project 11 75896302 75915842 + MGP_CBAJ_P0029838 Dlg4 protein_coding protein_coding MGP_CBAJ_T0029839.1 MGP_CBAJ_G0018304.1 mouse_genomes_project 11 75896336 75909074 + Dlg4 protein_coding processed_transcript MGP_CBAJ_T0029840.1 MGP_CBAJ_G0018304.1 mouse_genomes_project 11 75897527 75930123 + MGP_CBAJ_P0029840 Dlg4 protein_coding protein_coding MGP_CBAJ_T0029841.1 MGP_CBAJ_G0018304.1 mouse_genomes_project 11 75897778 75930123 + MGP_CBAJ_P0029841 Dlg4 protein_coding protein_coding MGP_CBAJ_T0029842.1 MGP_CBAJ_G0018304.1 mouse_genomes_project 11 75897914 75915738 + MGP_CBAJ_P0029842 Dlg4 protein_coding protein_coding MGP_CBAJ_T0029843.1 MGP_CBAJ_G0018304.1 mouse_genomes_project 11 75905973 75915720 + MGP_CBAJ_P0029843 Dlg4 protein_coding protein_coding MGP_CBAJ_T0029844.1 MGP_CBAJ_G0018304.1 mouse_genomes_project 11 75908835 75915580 + MGP_CBAJ_P0029844 Dlg4 protein_coding protein_coding MGP_CBAJ_T0029845.1 MGP_CBAJ_G0018304.1 mouse_genomes_project 11 75914330 75923680 + MGP_CBAJ_P0029845 Dlg4 protein_coding protein_coding MGP_CBAJ_T0029846.1 MGP_CBAJ_G0018304.1 mouse_genomes_project 11 75914611 75915499 + MGP_CBAJ_P0029846 Dlg4 protein_coding protein_coding MGP_CBAJ_T0029847.1 MGP_CBAJ_G0018304.1 mouse_genomes_project 11 75915225 75916323 + Dlg4 protein_coding retained_intron MGP_CBAJ_T0029848.1 MGP_CBAJ_G0018304.1 mouse_genomes_project 11 75924458 75929210 + MGP_CBAJ_P0029848 Dlg4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029849.1 MGP_CBAJ_G0018304.1 mouse_genomes_project 11 75928787 75929309 + Dlg4 protein_coding retained_intron MGP_CBAJ_T0033906.1 MGP_CBAJ_G0019266.1 mouse_genomes_project 11 134755505 134789144 - MGP_CBAJ_P0033906 Rab40b protein_coding protein_coding MGP_CBAJ_T0033907.1 MGP_CBAJ_G0019266.1 mouse_genomes_project 11 134757382 134788958 - Rab40b protein_coding processed_transcript MGP_CBAJ_T0033908.1 MGP_CBAJ_G0019266.1 mouse_genomes_project 11 134758971 134789114 - Rab40b protein_coding processed_transcript MGP_CBAJ_T0033909.1 MGP_CBAJ_G0019266.1 mouse_genomes_project 11 134758990 134789123 - Rab40b protein_coding processed_transcript MGP_CBAJ_T0030147.1 MGP_CBAJ_G0018368.1 mouse_genomes_project 11 78826794 78918649 + MGP_CBAJ_P0030147 Ube2g1 protein_coding protein_coding MGP_CBAJ_T0030148.1 MGP_CBAJ_G0018368.1 mouse_genomes_project 11 78826794 78918649 + MGP_CBAJ_P0030148 Ube2g1 protein_coding protein_coding MGP_CBAJ_T0030149.1 MGP_CBAJ_G0018368.1 mouse_genomes_project 11 78826830 78912308 + Ube2g1 protein_coding retained_intron MGP_CBAJ_T0032186.1 MGP_CBAJ_G0018916.1 mouse_genomes_project 11 111865699 111874518 + MGP_CBAJ_P0032186 Aoc3 protein_coding protein_coding MGP_CBAJ_T0032187.1 MGP_CBAJ_G0018916.1 mouse_genomes_project 11 111866163 111885288 + MGP_CBAJ_P0032187 Aoc3 protein_coding protein_coding MGP_CBAJ_T0003186.1 MGP_CBAJ_G0002950.1 mouse_genomes_project 11 97329819 97374638 + antisense antisense MGP_CBAJ_T0098722.1 MGP_CBAJ_G0036977.1 mouse_genomes_project 11 105390217 105390342 + Gm24725 snRNA snRNA MGP_CBAJ_T0030636.1 MGP_CBAJ_G0018494.1 mouse_genomes_project 11 85275667 85286460 + MGP_CBAJ_P0030636 Sdf2 protein_coding protein_coding MGP_CBAJ_T0030637.1 MGP_CBAJ_G0018494.1 mouse_genomes_project 11 85280345 85286460 + Sdf2 protein_coding processed_transcript MGP_CBAJ_T0030638.1 MGP_CBAJ_G0018494.1 mouse_genomes_project 11 85280818 85286081 + Sdf2 protein_coding retained_intron MGP_CBAJ_T0031769.1 MGP_CBAJ_G0018782.1 mouse_genomes_project 11 108313348 108314491 + MGP_CBAJ_P0031769 Tcap protein_coding protein_coding MGP_CBAJ_T0012460.1 MGP_CBAJ_G0010572.1 mouse_genomes_project 11 58763739 58764193 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003050.1 MGP_CBAJ_G0002838.1 mouse_genomes_project 11 10159333 10179394 + 1700042O10Rik antisense antisense MGP_CBAJ_T0030715.1 MGP_CBAJ_G0018515.1 mouse_genomes_project 11 85937833 85958122 + MGP_CBAJ_P0030715 Lyrm9 protein_coding protein_coding MGP_CBAJ_T0030716.1 MGP_CBAJ_G0018515.1 mouse_genomes_project 11 85937853 85949507 + MGP_CBAJ_P0030716 Lyrm9 protein_coding protein_coding MGP_CBAJ_T0030717.1 MGP_CBAJ_G0018515.1 mouse_genomes_project 11 85937878 85950526 + Lyrm9 protein_coding processed_transcript MGP_CBAJ_T0012469.1 MGP_CBAJ_G0010581.1 mouse_genomes_project 11 62650192 62650411 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006088.1 MGP_CBAJ_G0005077.1 mouse_genomes_project 11 17500156 17602434 - Gm12023 lincRNA lincRNA MGP_CBAJ_T0012530.1 MGP_CBAJ_G0010642.1 mouse_genomes_project 11 86364848 86365296 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009553.1 MGP_CBAJ_G0007691.1 mouse_genomes_project 11 48590523 48590580 + Mir7239 miRNA miRNA MGP_CBAJ_T0031904.1 MGP_CBAJ_G0018821.1 mouse_genomes_project 11 109709456 109716680 - MGP_CBAJ_P0031904 Krt39 protein_coding protein_coding MGP_CBAJ_T0031905.1 MGP_CBAJ_G0018821.1 mouse_genomes_project 11 109709966 109716600 - MGP_CBAJ_P0031905 Krt39 protein_coding protein_coding MGP_CBAJ_T0031066.1 MGP_CBAJ_G0018610.1 mouse_genomes_project 11 93871093 93905341 + MGP_CBAJ_P0031066 Tbx4 protein_coding protein_coding MGP_CBAJ_T0031067.1 MGP_CBAJ_G0018610.1 mouse_genomes_project 11 93874733 93905343 + MGP_CBAJ_P0031067 Tbx4 protein_coding protein_coding MGP_CBAJ_T0031068.1 MGP_CBAJ_G0018610.1 mouse_genomes_project 11 93881460 93905341 + MGP_CBAJ_P0031068 Tbx4 protein_coding protein_coding MGP_CBAJ_T0031911.1 MGP_CBAJ_G0018826.1 mouse_genomes_project 11 109769537 109770141 - MGP_CBAJ_P0031911 Krtap3-1 protein_coding protein_coding MGP_CBAJ_T0006247.1 MGP_CBAJ_G0005202.1 mouse_genomes_project 11 113397672 113404343 - lincRNA lincRNA MGP_CBAJ_T0006248.1 MGP_CBAJ_G0005202.1 mouse_genomes_project 11 113401287 113404293 - lincRNA lincRNA MGP_CBAJ_T0012596.1 MGP_CBAJ_G0010708.1 mouse_genomes_project 11 118466152 118466984 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0032661.1 MGP_CBAJ_G0019012.1 mouse_genomes_project 11 117383684 117391232 + MGP_CBAJ_P0032661 Taco1 protein_coding protein_coding MGP_CBAJ_T0027383.1 MGP_CBAJ_G0017688.1 mouse_genomes_project 11 602671 616081 - MGP_CBAJ_P0027383 protein_coding non_stop_decay MGP_CBAJ_T0027384.1 MGP_CBAJ_G0017688.1 mouse_genomes_project 11 602671 613441 - MGP_CBAJ_P0027384 protein_coding protein_coding MGP_CBAJ_T0027385.1 MGP_CBAJ_G0017688.1 mouse_genomes_project 11 602671 616078 - MGP_CBAJ_P0027385 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027386.1 MGP_CBAJ_G0017688.1 mouse_genomes_project 11 602836 616093 - MGP_CBAJ_P0027386 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027387.1 MGP_CBAJ_G0017688.1 mouse_genomes_project 11 602949 616665 - MGP_CBAJ_P0027387 protein_coding unknown_likely_coding MGP_CBAJ_T0027388.1 MGP_CBAJ_G0017688.1 mouse_genomes_project 11 610261 616106 - MGP_CBAJ_P0027388 protein_coding nonsense_mediated_decay MGP_CBAJ_T0098685.1 MGP_CBAJ_G0036940.1 mouse_genomes_project 11 56928667 56928774 + Gm25930 snRNA snRNA MGP_CBAJ_T0009565.1 MGP_CBAJ_G0007703.1 mouse_genomes_project 11 63709534 63709630 - Gm24756 miRNA miRNA MGP_CBAJ_T0028698.1 MGP_CBAJ_G0018016.1 mouse_genomes_project 11 56968433 56969423 - MGP_CBAJ_P0028698 Leap2 protein_coding protein_coding MGP_CBAJ_T0032250.1 MGP_CBAJ_G0018930.1 mouse_genomes_project 11 112269131 112271423 + MGP_CBAJ_P0032250 Arl4d protein_coding protein_coding MGP_CBAJ_T0012480.1 MGP_CBAJ_G0010592.1 mouse_genomes_project 11 65753167 65753884 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0029383.1 MGP_CBAJ_G0018201.1 mouse_genomes_project 11 70128254 70309746 - MGP_CBAJ_P0029383 Arhgap44 protein_coding protein_coding MGP_CBAJ_T0029384.1 MGP_CBAJ_G0018201.1 mouse_genomes_project 11 70128255 70309689 - MGP_CBAJ_P0029384 Arhgap44 protein_coding protein_coding MGP_CBAJ_T0029385.1 MGP_CBAJ_G0018201.1 mouse_genomes_project 11 70128256 70196057 - MGP_CBAJ_P0029385 Arhgap44 protein_coding protein_coding MGP_CBAJ_T0029386.1 MGP_CBAJ_G0018201.1 mouse_genomes_project 11 70184578 70309356 - MGP_CBAJ_P0029386 Arhgap44 protein_coding protein_coding MGP_CBAJ_T0027678.1 MGP_CBAJ_G0017755.1 mouse_genomes_project 11 4208938 4264408 + MGP_CBAJ_P0027678 Ccm2 protein_coding protein_coding MGP_CBAJ_T0027679.1 MGP_CBAJ_G0017755.1 mouse_genomes_project 11 4208961 4257138 + MGP_CBAJ_P0027679 Ccm2 protein_coding protein_coding MGP_CBAJ_T0027680.1 MGP_CBAJ_G0017755.1 mouse_genomes_project 11 4223141 4264398 + MGP_CBAJ_P0027680 Ccm2 protein_coding protein_coding MGP_CBAJ_T0027681.1 MGP_CBAJ_G0017755.1 mouse_genomes_project 11 4224070 4260797 + MGP_CBAJ_P0027681 Ccm2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027682.1 MGP_CBAJ_G0017755.1 mouse_genomes_project 11 4224079 4225911 + Ccm2 protein_coding processed_transcript MGP_CBAJ_T0027683.1 MGP_CBAJ_G0017755.1 mouse_genomes_project 11 4224092 4260734 + MGP_CBAJ_P0027683 Ccm2 protein_coding protein_coding MGP_CBAJ_T0027684.1 MGP_CBAJ_G0017755.1 mouse_genomes_project 11 4224188 4264406 + MGP_CBAJ_P0027684 Ccm2 protein_coding protein_coding MGP_CBAJ_T0027685.1 MGP_CBAJ_G0017755.1 mouse_genomes_project 11 4260711 4261933 + Ccm2 protein_coding retained_intron MGP_CBAJ_T0006277.1 MGP_CBAJ_G0005225.1 mouse_genomes_project 11 129860659 129862517 + Gm11731 lincRNA lincRNA MGP_CBAJ_T0003128.1 MGP_CBAJ_G0002904.1 mouse_genomes_project 11 67598597 67603942 + Zfp286os antisense antisense MGP_CBAJ_T0027415.1 MGP_CBAJ_G0017694.1 mouse_genomes_project 11 1084480 1088639 + MGP_CBAJ_P0027415 Dusp18 protein_coding protein_coding MGP_CBAJ_T0027416.1 MGP_CBAJ_G0017694.1 mouse_genomes_project 11 1084480 1090582 + MGP_CBAJ_P0027416 Dusp18 protein_coding protein_coding MGP_CBAJ_T0012370.1 MGP_CBAJ_G0010482.1 mouse_genomes_project 11 20767534 20767747 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009572.1 MGP_CBAJ_G0007710.1 mouse_genomes_project 11 70918021 70918121 - Mir744 miRNA miRNA MGP_CBAJ_T0030130.1 MGP_CBAJ_G0018365.1 mouse_genomes_project 11 78630621 78641035 + Mybbp1a protein_coding retained_intron MGP_CBAJ_T0030131.1 MGP_CBAJ_G0018365.1 mouse_genomes_project 11 78630621 78641035 + MGP_CBAJ_P0030131 Mybbp1a protein_coding protein_coding MGP_CBAJ_T0030132.1 MGP_CBAJ_G0018365.1 mouse_genomes_project 11 78630623 78640496 + Mybbp1a protein_coding retained_intron MGP_CBAJ_T0030133.1 MGP_CBAJ_G0018365.1 mouse_genomes_project 11 78630643 78632840 + Mybbp1a protein_coding retained_intron MGP_CBAJ_T0030134.1 MGP_CBAJ_G0018365.1 mouse_genomes_project 11 78633038 78633830 + Mybbp1a protein_coding retained_intron MGP_CBAJ_T0030135.1 MGP_CBAJ_G0018365.1 mouse_genomes_project 11 78637483 78640272 + Mybbp1a protein_coding retained_intron MGP_CBAJ_T0030136.1 MGP_CBAJ_G0018365.1 mouse_genomes_project 11 78638904 78639973 + Mybbp1a protein_coding retained_intron MGP_CBAJ_T0030137.1 MGP_CBAJ_G0018365.1 mouse_genomes_project 11 78639840 78640369 + Mybbp1a protein_coding retained_intron MGP_CBAJ_T0030080.1 MGP_CBAJ_G0018350.1 mouse_genomes_project 11 77230584 77267345 - MGP_CBAJ_P0030080 Nlrp1b protein_coding protein_coding MGP_CBAJ_T0030081.1 MGP_CBAJ_G0018350.1 mouse_genomes_project 11 77232707 77267250 - MGP_CBAJ_P0030081 Nlrp1b protein_coding protein_coding MGP_CBAJ_T0027894.1 MGP_CBAJ_G0017806.1 mouse_genomes_project 11 21967737 21977983 + MGP_CBAJ_P0027894 Tmem17 protein_coding protein_coding MGP_CBAJ_T0006164.1 MGP_CBAJ_G0005144.1 mouse_genomes_project 11 68059999 68077040 + B430319H21Rik lincRNA lincRNA MGP_CBAJ_T0032041.1 MGP_CBAJ_G0018885.1 mouse_genomes_project 11 111137888 111145316 - Kat2a protein_coding processed_transcript MGP_CBAJ_T0032042.1 MGP_CBAJ_G0018885.1 mouse_genomes_project 11 111137888 111145592 - Kat2a protein_coding processed_transcript MGP_CBAJ_T0032043.1 MGP_CBAJ_G0018885.1 mouse_genomes_project 11 111137888 111145608 - MGP_CBAJ_P0032043 Kat2a protein_coding protein_coding MGP_CBAJ_T0032044.1 MGP_CBAJ_G0018885.1 mouse_genomes_project 11 111137888 111145608 - MGP_CBAJ_P0032044 Kat2a protein_coding protein_coding MGP_CBAJ_T0027810.1 MGP_CBAJ_G0017785.1 mouse_genomes_project 11 15988058 16031182 + MGP_CBAJ_P0027810 Ppp3r1 protein_coding protein_coding MGP_CBAJ_T0027812.1 MGP_CBAJ_G0017785.1 mouse_genomes_project 11 16023689 16025949 + Ppp3r1 protein_coding processed_transcript MGP_CBAJ_T0012585.1 MGP_CBAJ_G0010697.1 mouse_genomes_project 11 113529648 113530412 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012507.1 MGP_CBAJ_G0010619.1 mouse_genomes_project 11 77159422 77162165 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006290.1 MGP_CBAJ_G0005236.1 mouse_genomes_project 11 133772794 133775038 - Gm16755 lincRNA lincRNA MGP_CBAJ_T0029027.1 MGP_CBAJ_G0018128.1 mouse_genomes_project 11 63941166 63973635 + MGP_CBAJ_P0029027 Nlrp3 protein_coding protein_coding MGP_CBAJ_T0029028.1 MGP_CBAJ_G0018128.1 mouse_genomes_project 11 63942284 63973636 + MGP_CBAJ_P0029028 Nlrp3 protein_coding protein_coding MGP_CBAJ_T0029029.1 MGP_CBAJ_G0018128.1 mouse_genomes_project 11 63942354 63947661 + MGP_CBAJ_P0029029 Nlrp3 protein_coding protein_coding MGP_CBAJ_T0028973.1 MGP_CBAJ_G0018111.1 mouse_genomes_project 11 63257401 63259547 + MGP_CBAJ_P0028973 Hist3h2a protein_coding protein_coding MGP_CBAJ_T0027821.1 MGP_CBAJ_G0017789.1 mouse_genomes_project 11 16838275 16852825 - MGP_CBAJ_P0027821 Etaa1 protein_coding protein_coding MGP_CBAJ_T0012407.1 MGP_CBAJ_G0010519.1 mouse_genomes_project 11 32866912 32867609 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0028406.1 MGP_CBAJ_G0017936.1 mouse_genomes_project 11 51718572 51719409 - MGP_CBAJ_P0028406 Psme2b protein_coding protein_coding MGP_CBAJ_T0030935.1 MGP_CBAJ_G0018577.1 mouse_genomes_project 11 91231088 91235835 - MGP_CBAJ_P0030935 Ccl5 protein_coding protein_coding MGP_CBAJ_T0030936.1 MGP_CBAJ_G0018577.1 mouse_genomes_project 11 91234048 91235830 - Ccl5 protein_coding retained_intron MGP_CBAJ_T0003077.1 MGP_CBAJ_G0002860.1 mouse_genomes_project 11 48561873 48565216 - Gm16033 antisense antisense MGP_CBAJ_T0028945.1 MGP_CBAJ_G0018092.1 mouse_genomes_project 11 62914018 62914990 - MGP_CBAJ_P0028945 Olfr323 protein_coding protein_coding MGP_CBAJ_T0028946.1 MGP_CBAJ_G0018092.1 mouse_genomes_project 11 62914018 62914987 - MGP_CBAJ_P0028946 Olfr323 protein_coding protein_coding MGP_CBAJ_T0027527.1 MGP_CBAJ_G0017722.1 mouse_genomes_project 11 2352969 2419761 + MGP_CBAJ_P0027527 Ap1b1 protein_coding protein_coding MGP_CBAJ_T0027528.1 MGP_CBAJ_G0017722.1 mouse_genomes_project 11 2352969 2419699 + MGP_CBAJ_P0027528 Ap1b1 protein_coding protein_coding MGP_CBAJ_T0027529.1 MGP_CBAJ_G0017722.1 mouse_genomes_project 11 2353057 2387285 + Ap1b1 protein_coding processed_transcript MGP_CBAJ_T0027530.1 MGP_CBAJ_G0017722.1 mouse_genomes_project 11 2353079 2388395 + Ap1b1 protein_coding processed_transcript MGP_CBAJ_T0027531.1 MGP_CBAJ_G0017722.1 mouse_genomes_project 11 2381456 2387285 + Ap1b1 protein_coding processed_transcript MGP_CBAJ_T0027532.1 MGP_CBAJ_G0017722.1 mouse_genomes_project 11 2381512 2419699 + MGP_CBAJ_P0027532 Ap1b1 protein_coding protein_coding MGP_CBAJ_T0027533.1 MGP_CBAJ_G0017722.1 mouse_genomes_project 11 2407946 2409760 + Ap1b1 protein_coding processed_transcript MGP_CBAJ_T0027534.1 MGP_CBAJ_G0017722.1 mouse_genomes_project 11 2414338 2417372 + Ap1b1 protein_coding processed_transcript MGP_CBAJ_T0027535.1 MGP_CBAJ_G0017722.1 mouse_genomes_project 11 2415733 2417391 + Ap1b1 protein_coding processed_transcript MGP_CBAJ_T0033436.1 MGP_CBAJ_G0019170.1 mouse_genomes_project 11 130742074 130744149 + MGP_CBAJ_P0033436 Tmc8 protein_coding protein_coding MGP_CBAJ_T0033437.1 MGP_CBAJ_G0019170.1 mouse_genomes_project 11 130742295 130755474 + MGP_CBAJ_P0033437 Tmc8 protein_coding protein_coding MGP_CBAJ_T0033438.1 MGP_CBAJ_G0019170.1 mouse_genomes_project 11 130742313 130755556 + MGP_CBAJ_P0033438 Tmc8 protein_coding protein_coding MGP_CBAJ_T0033439.1 MGP_CBAJ_G0019170.1 mouse_genomes_project 11 130742383 130755327 + MGP_CBAJ_P0033439 Tmc8 protein_coding protein_coding MGP_CBAJ_T0033440.1 MGP_CBAJ_G0019170.1 mouse_genomes_project 11 130742656 130755529 + MGP_CBAJ_P0033440 Tmc8 protein_coding protein_coding MGP_CBAJ_T0033441.1 MGP_CBAJ_G0019170.1 mouse_genomes_project 11 130753631 130755057 + Tmc8 protein_coding retained_intron MGP_CBAJ_T0029619.1 MGP_CBAJ_G0018254.1 mouse_genomes_project 11 75076961 75083740 + MGP_CBAJ_P0029619 Kcnab3 protein_coding protein_coding MGP_CBAJ_T0029620.1 MGP_CBAJ_G0018254.1 mouse_genomes_project 11 75078569 75083740 + Kcnab3 protein_coding retained_intron MGP_CBAJ_T0029621.1 MGP_CBAJ_G0018254.1 mouse_genomes_project 11 75081027 75082841 + Kcnab3 protein_coding retained_intron MGP_CBAJ_T0028947.1 MGP_CBAJ_G0018093.1 mouse_genomes_project 11 62929435 62941248 + MGP_CBAJ_P0028947 Trim58 protein_coding protein_coding MGP_CBAJ_T0030833.1 MGP_CBAJ_G0018543.1 mouse_genomes_project 11 88289255 89466971 - MGP_CBAJ_P0030833 Asic2 protein_coding protein_coding MGP_CBAJ_T0030834.1 MGP_CBAJ_G0018543.1 mouse_genomes_project 11 88289255 88576350 - MGP_CBAJ_P0030834 Asic2 protein_coding protein_coding MGP_CBAJ_T0012556.1 MGP_CBAJ_G0010668.1 mouse_genomes_project 11 99577803 99579385 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009574.1 MGP_CBAJ_G0007712.1 mouse_genomes_project 11 73785161 73785281 + Mir6406 miRNA miRNA MGP_CBAJ_T0028969.1 MGP_CBAJ_G0018107.1 mouse_genomes_project 11 63226595 63227728 + MGP_CBAJ_P0028969 protein_coding protein_coding MGP_CBAJ_T0101556.1 MGP_CBAJ_G0039588.1 mouse_genomes_project 11 104054354 104055133 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0000815.1 MGP_CBAJ_G0000751.1 mouse_genomes_project 11 91959799 91962115 + TEC TEC MGP_CBAJ_T0003102.1 MGP_CBAJ_G0002882.1 mouse_genomes_project 11 59702584 60044470 + antisense antisense MGP_CBAJ_T0031298.1 MGP_CBAJ_G0018668.1 mouse_genomes_project 11 100377609 100379853 - MGP_CBAJ_P0031298 Kif2b protein_coding protein_coding MGP_CBAJ_T0012618.1 MGP_CBAJ_G0010730.1 mouse_genomes_project 11 129238484 129238787 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0032868.1 MGP_CBAJ_G0019057.1 mouse_genomes_project 11 121468470 121473022 + Prkar1a protein_coding processed_transcript MGP_CBAJ_T0032869.1 MGP_CBAJ_G0019057.1 mouse_genomes_project 11 121468470 121489110 + MGP_CBAJ_P0032869 Prkar1a protein_coding protein_coding MGP_CBAJ_T0032870.1 MGP_CBAJ_G0019057.1 mouse_genomes_project 11 121469640 121480825 + MGP_CBAJ_P0032870 Prkar1a protein_coding protein_coding MGP_CBAJ_T0032871.1 MGP_CBAJ_G0019057.1 mouse_genomes_project 11 121469986 121489110 + MGP_CBAJ_P0032871 Prkar1a protein_coding protein_coding MGP_CBAJ_T0032872.1 MGP_CBAJ_G0019057.1 mouse_genomes_project 11 121470023 121489108 + MGP_CBAJ_P0032872 Prkar1a protein_coding unknown_likely_coding MGP_CBAJ_T0032873.1 MGP_CBAJ_G0019057.1 mouse_genomes_project 11 121485397 121486430 + Prkar1a protein_coding processed_transcript MGP_CBAJ_T0011191.1 MGP_CBAJ_G0009329.1 mouse_genomes_project 11 119413649 119413936 + Gm23120 misc_RNA misc_RNA MGP_CBAJ_T0031237.1 MGP_CBAJ_G0018649.1 mouse_genomes_project 11 96662706 96663908 + MGP_CBAJ_P0031237 Ccdc182 protein_coding protein_coding MGP_CBAJ_T0016914.1 MGP_CBAJ_G0014897.1 mouse_genomes_project 11 22371531 22373939 + 9130230N09Rik processed_transcript processed_transcript MGP_CBAJ_T0032939.1 MGP_CBAJ_G0019074.1 mouse_genomes_project 11 125985496 125999311 - MGP_CBAJ_P0032939 Cpsf4l protein_coding protein_coding MGP_CBAJ_T0032940.1 MGP_CBAJ_G0019074.1 mouse_genomes_project 11 125985496 125998817 - MGP_CBAJ_P0032940 Cpsf4l protein_coding protein_coding MGP_CBAJ_T0032941.1 MGP_CBAJ_G0019074.1 mouse_genomes_project 11 125985496 125998811 - MGP_CBAJ_P0032941 Cpsf4l protein_coding protein_coding MGP_CBAJ_T0032942.1 MGP_CBAJ_G0019074.1 mouse_genomes_project 11 125985496 125998258 - MGP_CBAJ_P0032942 Cpsf4l protein_coding protein_coding MGP_CBAJ_T0032943.1 MGP_CBAJ_G0019074.1 mouse_genomes_project 11 125990049 125998815 - Cpsf4l protein_coding retained_intron MGP_CBAJ_T0003217.1 MGP_CBAJ_G0002973.1 mouse_genomes_project 11 109570938 109571496 + Gm11940 antisense antisense MGP_CBAJ_T0033654.1 MGP_CBAJ_G0019213.1 mouse_genomes_project 11 133480545 133547907 + MGP_CBAJ_P0033654 Bahcc1 protein_coding protein_coding MGP_CBAJ_T0033655.1 MGP_CBAJ_G0019213.1 mouse_genomes_project 11 133480545 133547907 + MGP_CBAJ_P0033655 Bahcc1 protein_coding protein_coding MGP_CBAJ_T0033656.1 MGP_CBAJ_G0019213.1 mouse_genomes_project 11 133484044 133484884 + Bahcc1 protein_coding processed_transcript MGP_CBAJ_T0033657.1 MGP_CBAJ_G0019213.1 mouse_genomes_project 11 133484298 133547907 + MGP_CBAJ_P0033657 Bahcc1 protein_coding protein_coding MGP_CBAJ_T0030835.1 MGP_CBAJ_G0018544.1 mouse_genomes_project 11 89346655 89354467 + 5530401A14Rik protein_coding processed_transcript MGP_CBAJ_T0030836.1 MGP_CBAJ_G0018544.1 mouse_genomes_project 11 89346661 89382667 + MGP_CBAJ_P0030836 5530401A14Rik protein_coding protein_coding MGP_CBAJ_T0009599.1 MGP_CBAJ_G0007737.1 mouse_genomes_project 11 85067899 85067971 - Mir451b miRNA miRNA MGP_CBAJ_T0017033.1 MGP_CBAJ_G0014964.1 mouse_genomes_project 11 133421668 133425021 - 2810410L24Rik processed_transcript processed_transcript MGP_CBAJ_T0017034.1 MGP_CBAJ_G0014964.1 mouse_genomes_project 11 133423975 133426122 - 2810410L24Rik processed_transcript processed_transcript MGP_CBAJ_T0033045.1 MGP_CBAJ_G0019103.1 mouse_genomes_project 11 127856355 127878108 - MGP_CBAJ_P0033045 Hid1 protein_coding protein_coding MGP_CBAJ_T0033046.1 MGP_CBAJ_G0019103.1 mouse_genomes_project 11 127856355 127878145 - MGP_CBAJ_P0033046 Hid1 protein_coding protein_coding MGP_CBAJ_T0033047.1 MGP_CBAJ_G0019103.1 mouse_genomes_project 11 127857657 127859651 - Hid1 protein_coding processed_transcript MGP_CBAJ_T0033048.1 MGP_CBAJ_G0019103.1 mouse_genomes_project 11 127862760 127865781 - Hid1 protein_coding processed_transcript MGP_CBAJ_T0033049.1 MGP_CBAJ_G0019103.1 mouse_genomes_project 11 127865766 127878056 - MGP_CBAJ_P0033049 Hid1 protein_coding protein_coding MGP_CBAJ_T0033050.1 MGP_CBAJ_G0019103.1 mouse_genomes_project 11 127867095 127870708 - Hid1 protein_coding processed_transcript MGP_CBAJ_T0033051.1 MGP_CBAJ_G0019103.1 mouse_genomes_project 11 127867190 127877998 - Hid1 protein_coding processed_transcript MGP_CBAJ_T0033052.1 MGP_CBAJ_G0019103.1 mouse_genomes_project 11 127869070 127869711 - Hid1 protein_coding processed_transcript MGP_CBAJ_T0098259.1 MGP_CBAJ_G0036531.1 mouse_genomes_project 11 59383203 59383327 + Gm12238 sense_intronic sense_intronic MGP_CBAJ_T0028933.1 MGP_CBAJ_G0018084.1 mouse_genomes_project 11 62770402 62826852 - MGP_CBAJ_P0028933 protein_coding protein_coding MGP_CBAJ_T0099939.1 MGP_CBAJ_G0038194.1 mouse_genomes_project 11 81420178 81420271 + Snord91a snoRNA snoRNA MGP_CBAJ_T0097907.1 MGP_CBAJ_G0036180.1 mouse_genomes_project 11 78427730 78427846 + n-R5s70 rRNA rRNA MGP_CBAJ_T0032179.1 MGP_CBAJ_G0018914.1 mouse_genomes_project 11 111849418 111853214 + MGP_CBAJ_P0032179 Psme3 protein_coding protein_coding MGP_CBAJ_T0032180.1 MGP_CBAJ_G0018914.1 mouse_genomes_project 11 111849418 111856743 + MGP_CBAJ_P0032180 Psme3 protein_coding protein_coding MGP_CBAJ_T0032181.1 MGP_CBAJ_G0018914.1 mouse_genomes_project 11 111850182 111853800 + MGP_CBAJ_P0032181 Psme3 protein_coding protein_coding MGP_CBAJ_T0032182.1 MGP_CBAJ_G0018914.1 mouse_genomes_project 11 111850228 111853230 + Psme3 protein_coding processed_transcript MGP_CBAJ_T0032183.1 MGP_CBAJ_G0018914.1 mouse_genomes_project 11 111853039 111855305 + Psme3 protein_coding processed_transcript MGP_CBAJ_T0028959.1 MGP_CBAJ_G0018102.1 mouse_genomes_project 11 63142351 63157137 + MGP_CBAJ_P0028959 Gm12258 protein_coding protein_coding MGP_CBAJ_T0028960.1 MGP_CBAJ_G0018102.1 mouse_genomes_project 11 63142385 63146590 + Gm12258 protein_coding processed_transcript MGP_CBAJ_T0029588.1 MGP_CBAJ_G0018247.1 mouse_genomes_project 11 74850266 74853890 + MGP_CBAJ_P0029588 Hes7 protein_coding protein_coding MGP_CBAJ_T0029320.1 MGP_CBAJ_G0018183.1 mouse_genomes_project 11 67365794 67367521 + MGP_CBAJ_P0029320 Ubb protein_coding protein_coding MGP_CBAJ_T0032531.1 MGP_CBAJ_G0018982.1 mouse_genomes_project 11 114269250 114298822 - MGP_CBAJ_P0032531 Arhgap27 protein_coding protein_coding MGP_CBAJ_T0032532.1 MGP_CBAJ_G0018982.1 mouse_genomes_project 11 114269251 114301428 - Arhgap27 protein_coding retained_intron MGP_CBAJ_T0032533.1 MGP_CBAJ_G0018982.1 mouse_genomes_project 11 114269253 114282477 - MGP_CBAJ_P0032533 Arhgap27 protein_coding protein_coding MGP_CBAJ_T0032534.1 MGP_CBAJ_G0018982.1 mouse_genomes_project 11 114270919 114271860 - Arhgap27 protein_coding retained_intron MGP_CBAJ_T0032535.1 MGP_CBAJ_G0018982.1 mouse_genomes_project 11 114270982 114271149 - Arhgap27 protein_coding processed_transcript MGP_CBAJ_T0032536.1 MGP_CBAJ_G0018982.1 mouse_genomes_project 11 114271218 114271839 - Arhgap27 protein_coding retained_intron MGP_CBAJ_T0032537.1 MGP_CBAJ_G0018982.1 mouse_genomes_project 11 114273017 114277502 - Arhgap27 protein_coding retained_intron MGP_CBAJ_T0032538.1 MGP_CBAJ_G0018982.1 mouse_genomes_project 11 114275541 114277086 - Arhgap27 protein_coding retained_intron MGP_CBAJ_T0032539.1 MGP_CBAJ_G0018982.1 mouse_genomes_project 11 114277011 114294283 - MGP_CBAJ_P0032539 Arhgap27 protein_coding protein_coding MGP_CBAJ_T0032540.1 MGP_CBAJ_G0018982.1 mouse_genomes_project 11 114277917 114294297 - MGP_CBAJ_P0032540 Arhgap27 protein_coding protein_coding MGP_CBAJ_T0032541.1 MGP_CBAJ_G0018982.1 mouse_genomes_project 11 114297660 114301200 - MGP_CBAJ_P0032541 Arhgap27 protein_coding protein_coding MGP_CBAJ_T0012361.1 MGP_CBAJ_G0010473.1 mouse_genomes_project 11 19425385 19425706 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0032568.1 MGP_CBAJ_G0018992.1 mouse_genomes_project 11 115174987 115219304 + MGP_CBAJ_P0032568 Crhr1 protein_coding protein_coding MGP_CBAJ_T0033881.1 MGP_CBAJ_G0019261.1 mouse_genomes_project 11 134590903 134607122 + MGP_CBAJ_P0033881 Hexdc protein_coding protein_coding MGP_CBAJ_T0033882.1 MGP_CBAJ_G0019261.1 mouse_genomes_project 11 134590905 134607114 + MGP_CBAJ_P0033882 Hexdc protein_coding protein_coding MGP_CBAJ_T0033883.1 MGP_CBAJ_G0019261.1 mouse_genomes_project 11 134591245 134604344 + Hexdc protein_coding processed_transcript MGP_CBAJ_T0033884.1 MGP_CBAJ_G0019261.1 mouse_genomes_project 11 134591271 134599828 + Hexdc protein_coding processed_transcript MGP_CBAJ_T0033885.1 MGP_CBAJ_G0019261.1 mouse_genomes_project 11 134592461 134607114 + MGP_CBAJ_P0033885 Hexdc protein_coding protein_coding MGP_CBAJ_T0033886.1 MGP_CBAJ_G0019261.1 mouse_genomes_project 11 134596808 134605494 + MGP_CBAJ_P0033886 Hexdc protein_coding protein_coding MGP_CBAJ_T0028344.1 MGP_CBAJ_G0017917.1 mouse_genomes_project 11 48621414 48751749 - MGP_CBAJ_P0028344 Cyfip2 protein_coding protein_coding MGP_CBAJ_T0028345.1 MGP_CBAJ_G0017917.1 mouse_genomes_project 11 48621414 48751248 - MGP_CBAJ_P0028345 Cyfip2 protein_coding protein_coding MGP_CBAJ_T0028346.1 MGP_CBAJ_G0017917.1 mouse_genomes_project 11 48621419 48751184 - MGP_CBAJ_P0028346 Cyfip2 protein_coding protein_coding MGP_CBAJ_T0028347.1 MGP_CBAJ_G0017917.1 mouse_genomes_project 11 48623635 48706833 - MGP_CBAJ_P0028347 Cyfip2 protein_coding protein_coding MGP_CBAJ_T0028349.1 MGP_CBAJ_G0017917.1 mouse_genomes_project 11 48730438 48751110 - MGP_CBAJ_P0028349 Cyfip2 protein_coding protein_coding MGP_CBAJ_T0012412.1 MGP_CBAJ_G0010524.1 mouse_genomes_project 11 34342766 34343298 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0031065.1 MGP_CBAJ_G0018609.1 mouse_genomes_project 11 93826587 93830034 - MGP_CBAJ_P0031065 Gm11444 protein_coding protein_coding MGP_CBAJ_T0098665.1 MGP_CBAJ_G0036920.1 mouse_genomes_project 11 1594303 1594410 - Gm24803 snRNA snRNA MGP_CBAJ_T0030406.1 MGP_CBAJ_G0018446.1 mouse_genomes_project 11 82422416 82449638 - MGP_CBAJ_P0030406 Doc2b protein_coding protein_coding MGP_CBAJ_T0030871.1 MGP_CBAJ_G0018557.1 mouse_genomes_project 11 90431158 90450024 - MGP_CBAJ_P0030871 Rad51d protein_coding nonsense_mediated_decay MGP_CBAJ_T0030872.1 MGP_CBAJ_G0018557.1 mouse_genomes_project 11 90431423 90450049 - MGP_CBAJ_P0030872 Rad51d protein_coding protein_coding MGP_CBAJ_T0030873.1 MGP_CBAJ_G0018557.1 mouse_genomes_project 11 90435935 90450024 - MGP_CBAJ_P0030873 Rad51d protein_coding protein_coding MGP_CBAJ_T0030874.1 MGP_CBAJ_G0018557.1 mouse_genomes_project 11 90435935 90450024 - MGP_CBAJ_P0030874 Rad51d protein_coding protein_coding MGP_CBAJ_T0030875.1 MGP_CBAJ_G0018557.1 mouse_genomes_project 11 90435935 90450024 - MGP_CBAJ_P0030875 Rad51d protein_coding nonsense_mediated_decay MGP_CBAJ_T0030876.1 MGP_CBAJ_G0018557.1 mouse_genomes_project 11 90435935 90450024 - MGP_CBAJ_P0030876 Rad51d protein_coding nonsense_mediated_decay MGP_CBAJ_T0009560.1 MGP_CBAJ_G0007698.1 mouse_genomes_project 11 56955461 56955532 + Mir6920 miRNA miRNA MGP_CBAJ_T0031497.1 MGP_CBAJ_G0018715.1 mouse_genomes_project 11 105263840 105273004 + MGP_CBAJ_P0031497 Phospho1 protein_coding protein_coding MGP_CBAJ_T0031498.1 MGP_CBAJ_G0018715.1 mouse_genomes_project 11 105263841 105274444 + MGP_CBAJ_P0031498 Phospho1 protein_coding protein_coding MGP_CBAJ_T0031500.1 MGP_CBAJ_G0018715.1 mouse_genomes_project 11 105273065 105273895 + MGP_CBAJ_P0031500 Phospho1 protein_coding protein_coding MGP_CBAJ_T0011185.1 MGP_CBAJ_G0009323.1 mouse_genomes_project 11 104289465 104289581 + Gm24877 misc_RNA misc_RNA MGP_CBAJ_T0032100.1 MGP_CBAJ_G0018899.1 mouse_genomes_project 11 111577054 111581985 + MGP_CBAJ_P0032100 Mlx protein_coding protein_coding MGP_CBAJ_T0032101.1 MGP_CBAJ_G0018899.1 mouse_genomes_project 11 111577054 111581985 + MGP_CBAJ_P0032101 Mlx protein_coding protein_coding MGP_CBAJ_T0032102.1 MGP_CBAJ_G0018899.1 mouse_genomes_project 11 111577067 111580904 + Mlx protein_coding processed_transcript MGP_CBAJ_T0032103.1 MGP_CBAJ_G0018899.1 mouse_genomes_project 11 111577067 111580924 + Mlx protein_coding processed_transcript MGP_CBAJ_T0032104.1 MGP_CBAJ_G0018899.1 mouse_genomes_project 11 111577077 111581985 + MGP_CBAJ_P0032104 Mlx protein_coding protein_coding MGP_CBAJ_T0032105.1 MGP_CBAJ_G0018899.1 mouse_genomes_project 11 111577081 111578743 + MGP_CBAJ_P0032105 Mlx protein_coding protein_coding MGP_CBAJ_T0032106.1 MGP_CBAJ_G0018899.1 mouse_genomes_project 11 111579439 111581296 + Mlx protein_coding processed_transcript MGP_CBAJ_T0027377.1 MGP_CBAJ_G0017686.1 mouse_genomes_project 11 508120 557891 - MGP_CBAJ_P0027377 Rnf185 protein_coding protein_coding MGP_CBAJ_T0027378.1 MGP_CBAJ_G0017686.1 mouse_genomes_project 11 508120 557891 - MGP_CBAJ_P0027378 Rnf185 protein_coding protein_coding MGP_CBAJ_T0027379.1 MGP_CBAJ_G0017686.1 mouse_genomes_project 11 510014 557862 - Rnf185 protein_coding processed_transcript MGP_CBAJ_T0009642.1 MGP_CBAJ_G0007780.1 mouse_genomes_project 11 119611372 119611441 + Mir7223 miRNA miRNA MGP_CBAJ_T0099959.1 MGP_CBAJ_G0038214.1 mouse_genomes_project 11 113653974 113654111 + Gm22683 snoRNA snoRNA MGP_CBAJ_T0029204.1 MGP_CBAJ_G0018166.1 mouse_genomes_project 11 66144079 66149122 + MGP_CBAJ_P0029204 Mfap4 protein_coding unknown_likely_coding MGP_CBAJ_T0029205.1 MGP_CBAJ_G0018166.1 mouse_genomes_project 11 66144140 66150021 + MGP_CBAJ_P0029205 Mfap4 protein_coding protein_coding MGP_CBAJ_T0029206.1 MGP_CBAJ_G0018166.1 mouse_genomes_project 11 66144170 66149196 + MGP_CBAJ_P0029206 Mfap4 protein_coding protein_coding MGP_CBAJ_T0029207.1 MGP_CBAJ_G0018166.1 mouse_genomes_project 11 66144200 66145662 + Mfap4 protein_coding processed_transcript MGP_CBAJ_T0029208.1 MGP_CBAJ_G0018166.1 mouse_genomes_project 11 66144225 66150021 + Mfap4 protein_coding processed_transcript MGP_CBAJ_T0030066.1 MGP_CBAJ_G0018347.1 mouse_genomes_project 11 77076819 77089390 - MGP_CBAJ_P0030066 Derl2 protein_coding protein_coding MGP_CBAJ_T0030067.1 MGP_CBAJ_G0018347.1 mouse_genomes_project 11 77077098 77089384 - MGP_CBAJ_P0030067 Derl2 protein_coding protein_coding MGP_CBAJ_T0030068.1 MGP_CBAJ_G0018347.1 mouse_genomes_project 11 77080007 77089417 - MGP_CBAJ_P0030068 Derl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030069.1 MGP_CBAJ_G0018347.1 mouse_genomes_project 11 77081778 77089391 - Derl2 protein_coding retained_intron MGP_CBAJ_T0030070.1 MGP_CBAJ_G0018347.1 mouse_genomes_project 11 77083266 77089423 - MGP_CBAJ_P0030070 Derl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030071.1 MGP_CBAJ_G0018347.1 mouse_genomes_project 11 77084710 77089360 - MGP_CBAJ_P0030071 Derl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027526.1 MGP_CBAJ_G0017721.1 mouse_genomes_project 11 2295424 2304735 - MGP_CBAJ_P0027526 Nefh protein_coding protein_coding MGP_CBAJ_T0029030.1 MGP_CBAJ_G0018129.1 mouse_genomes_project 11 63977740 63978859 - MGP_CBAJ_P0029030 Olfr222 protein_coding protein_coding MGP_CBAJ_T0000809.1 MGP_CBAJ_G0000745.1 mouse_genomes_project 11 17918974 17919841 - TEC TEC MGP_CBAJ_T0003089.1 MGP_CBAJ_G0002871.1 mouse_genomes_project 11 55658349 55668474 + A630014C17Rik antisense antisense MGP_CBAJ_T0012405.1 MGP_CBAJ_G0010517.1 mouse_genomes_project 11 31533032 31533636 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0032095.1 MGP_CBAJ_G0018897.1 mouse_genomes_project 11 111568189 111570306 + MGP_CBAJ_P0032095 Hsd17b1 protein_coding protein_coding MGP_CBAJ_T0030168.1 MGP_CBAJ_G0018372.1 mouse_genomes_project 11 79216239 79251633 + MGP_CBAJ_P0030168 Atp2a3 protein_coding protein_coding MGP_CBAJ_T0030169.1 MGP_CBAJ_G0018372.1 mouse_genomes_project 11 79216239 79251633 + MGP_CBAJ_P0030169 Atp2a3 protein_coding protein_coding MGP_CBAJ_T0030170.1 MGP_CBAJ_G0018372.1 mouse_genomes_project 11 79216239 79251633 + MGP_CBAJ_P0030170 Atp2a3 protein_coding protein_coding MGP_CBAJ_T0030171.1 MGP_CBAJ_G0018372.1 mouse_genomes_project 11 79216239 79251634 + MGP_CBAJ_P0030171 Atp2a3 protein_coding protein_coding MGP_CBAJ_T0030172.1 MGP_CBAJ_G0018372.1 mouse_genomes_project 11 79216239 79251634 + MGP_CBAJ_P0030172 Atp2a3 protein_coding protein_coding MGP_CBAJ_T0030173.1 MGP_CBAJ_G0018372.1 mouse_genomes_project 11 79216360 79227399 + Atp2a3 protein_coding retained_intron MGP_CBAJ_T0030174.1 MGP_CBAJ_G0018372.1 mouse_genomes_project 11 79240687 79242136 + Atp2a3 protein_coding processed_transcript MGP_CBAJ_T0028045.1 MGP_CBAJ_G0017839.1 mouse_genomes_project 11 30001001 30050662 + MGP_CBAJ_P0028045 Rtn4 protein_coding protein_coding MGP_CBAJ_T0028046.1 MGP_CBAJ_G0017839.1 mouse_genomes_project 11 30001001 30052077 + MGP_CBAJ_P0028046 Rtn4 protein_coding protein_coding MGP_CBAJ_T0028047.1 MGP_CBAJ_G0017839.1 mouse_genomes_project 11 30001001 30050662 + MGP_CBAJ_P0028047 Rtn4 protein_coding protein_coding MGP_CBAJ_T0028048.1 MGP_CBAJ_G0017839.1 mouse_genomes_project 11 30001002 30049857 + MGP_CBAJ_P0028048 Rtn4 protein_coding protein_coding MGP_CBAJ_T0028049.1 MGP_CBAJ_G0017839.1 mouse_genomes_project 11 30001825 30050662 + MGP_CBAJ_P0028049 Rtn4 protein_coding protein_coding MGP_CBAJ_T0028050.1 MGP_CBAJ_G0017839.1 mouse_genomes_project 11 30026369 30050662 + MGP_CBAJ_P0028050 Rtn4 protein_coding protein_coding MGP_CBAJ_T0028051.1 MGP_CBAJ_G0017839.1 mouse_genomes_project 11 30041492 30050181 + Rtn4 protein_coding processed_transcript MGP_CBAJ_T0028052.1 MGP_CBAJ_G0017839.1 mouse_genomes_project 11 30041567 30050093 + Rtn4 protein_coding processed_transcript MGP_CBAJ_T0028053.1 MGP_CBAJ_G0017839.1 mouse_genomes_project 11 30044189 30050093 + Rtn4 protein_coding processed_transcript MGP_CBAJ_T0028054.1 MGP_CBAJ_G0017839.1 mouse_genomes_project 11 30048757 30050031 + Rtn4 protein_coding processed_transcript MGP_CBAJ_T0003232.1 MGP_CBAJ_G0002985.1 mouse_genomes_project 11 112718115 112722932 - E130111B04Rik antisense antisense MGP_CBAJ_T0006095.1 MGP_CBAJ_G0005083.1 mouse_genomes_project 11 21880702 21881587 - Gm12050 lincRNA lincRNA MGP_CBAJ_T0028582.1 MGP_CBAJ_G0017986.1 mouse_genomes_project 11 54035114 54036062 + MGP_CBAJ_P0028582 Olfr1378 protein_coding protein_coding MGP_CBAJ_T0030258.1 MGP_CBAJ_G0018412.1 mouse_genomes_project 11 80692084 80693173 + MGP_CBAJ_P0030258 Olfr406 protein_coding protein_coding MGP_CBAJ_T0029109.1 MGP_CBAJ_G0018144.1 mouse_genomes_project 11 64928354 64971223 + MGP_CBAJ_P0029109 Gid4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029110.1 MGP_CBAJ_G0018144.1 mouse_genomes_project 11 64928471 64963763 + MGP_CBAJ_P0029110 Gid4 protein_coding protein_coding MGP_CBAJ_T0027514.1 MGP_CBAJ_G0017719.1 mouse_genomes_project 11 2221884 2248264 + MGP_CBAJ_P0027514 Nipsnap1 protein_coding protein_coding MGP_CBAJ_T0027515.1 MGP_CBAJ_G0017719.1 mouse_genomes_project 11 2221932 2247681 + MGP_CBAJ_P0027515 Nipsnap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027516.1 MGP_CBAJ_G0017719.1 mouse_genomes_project 11 2221938 2233251 + Nipsnap1 protein_coding processed_transcript MGP_CBAJ_T0027517.1 MGP_CBAJ_G0017719.1 mouse_genomes_project 11 2232040 2243203 + MGP_CBAJ_P0027517 Nipsnap1 protein_coding protein_coding MGP_CBAJ_T0027518.1 MGP_CBAJ_G0017719.1 mouse_genomes_project 11 2232052 2244045 + Nipsnap1 protein_coding processed_transcript MGP_CBAJ_T0027519.1 MGP_CBAJ_G0017719.1 mouse_genomes_project 11 2232110 2232963 + Nipsnap1 protein_coding processed_transcript MGP_CBAJ_T0028938.1 MGP_CBAJ_G0018088.1 mouse_genomes_project 11 62846753 62847780 - MGP_CBAJ_P0028938 Olfr224 protein_coding protein_coding MGP_CBAJ_T0009617.1 MGP_CBAJ_G0007755.1 mouse_genomes_project 11 106738940 106739047 + Mir8103 miRNA miRNA MGP_CBAJ_T0030960.1 MGP_CBAJ_G0018589.1 mouse_genomes_project 11 91722201 91805782 + MGP_CBAJ_P0030960 Synrg protein_coding protein_coding MGP_CBAJ_T0030961.1 MGP_CBAJ_G0018589.1 mouse_genomes_project 11 91722201 91802195 + MGP_CBAJ_P0030961 Synrg protein_coding protein_coding MGP_CBAJ_T0030962.1 MGP_CBAJ_G0018589.1 mouse_genomes_project 11 91722249 91802169 + MGP_CBAJ_P0030962 Synrg protein_coding protein_coding MGP_CBAJ_T0030963.1 MGP_CBAJ_G0018589.1 mouse_genomes_project 11 91722249 91802169 + MGP_CBAJ_P0030963 Synrg protein_coding protein_coding MGP_CBAJ_T0030964.1 MGP_CBAJ_G0018589.1 mouse_genomes_project 11 91741132 91751146 + Synrg protein_coding processed_transcript MGP_CBAJ_T0030965.1 MGP_CBAJ_G0018589.1 mouse_genomes_project 11 91741973 91752206 + MGP_CBAJ_P0030965 Synrg protein_coding protein_coding MGP_CBAJ_T0030966.1 MGP_CBAJ_G0018589.1 mouse_genomes_project 11 91751145 91752622 + Synrg protein_coding retained_intron MGP_CBAJ_T0030967.1 MGP_CBAJ_G0018589.1 mouse_genomes_project 11 91780464 91802652 + Synrg protein_coding retained_intron MGP_CBAJ_T0030968.1 MGP_CBAJ_G0018589.1 mouse_genomes_project 11 91787912 91801251 + Synrg protein_coding retained_intron MGP_CBAJ_T0028994.1 MGP_CBAJ_G0018117.1 mouse_genomes_project 11 63523020 63531029 - MGP_CBAJ_P0028994 Guk1 protein_coding protein_coding MGP_CBAJ_T0028995.1 MGP_CBAJ_G0018117.1 mouse_genomes_project 11 63523192 63526876 - MGP_CBAJ_P0028995 Guk1 protein_coding protein_coding MGP_CBAJ_T0028996.1 MGP_CBAJ_G0018117.1 mouse_genomes_project 11 63523255 63524590 - Guk1 protein_coding retained_intron MGP_CBAJ_T0028997.1 MGP_CBAJ_G0018117.1 mouse_genomes_project 11 63523301 63523994 - Guk1 protein_coding retained_intron MGP_CBAJ_T0028998.1 MGP_CBAJ_G0018117.1 mouse_genomes_project 11 63525316 63530889 - Guk1 protein_coding retained_intron MGP_CBAJ_T0028999.1 MGP_CBAJ_G0018117.1 mouse_genomes_project 11 63525926 63531302 - MGP_CBAJ_P0028999 Guk1 protein_coding protein_coding MGP_CBAJ_T0098680.1 MGP_CBAJ_G0036935.1 mouse_genomes_project 11 37955741 37955847 + Gm22127 snRNA snRNA MGP_CBAJ_T0028495.1 MGP_CBAJ_G0017967.1 mouse_genomes_project 11 53099634 53139991 + MGP_CBAJ_P0028495 Tbc1d9b protein_coding protein_coding MGP_CBAJ_T0028496.1 MGP_CBAJ_G0017967.1 mouse_genomes_project 11 53099634 53140746 + MGP_CBAJ_P0028496 Tbc1d9b protein_coding protein_coding MGP_CBAJ_T0028497.1 MGP_CBAJ_G0017967.1 mouse_genomes_project 11 53099640 53108697 + Tbc1d9b protein_coding processed_transcript MGP_CBAJ_T0028498.1 MGP_CBAJ_G0017967.1 mouse_genomes_project 11 53103665 53108807 + Tbc1d9b protein_coding processed_transcript MGP_CBAJ_T0028499.1 MGP_CBAJ_G0017967.1 mouse_genomes_project 11 53113421 53118625 + Tbc1d9b protein_coding processed_transcript MGP_CBAJ_T0028500.1 MGP_CBAJ_G0017967.1 mouse_genomes_project 11 53114810 53119860 + Tbc1d9b protein_coding processed_transcript MGP_CBAJ_T0028501.1 MGP_CBAJ_G0017967.1 mouse_genomes_project 11 53116550 53118384 + Tbc1d9b protein_coding processed_transcript MGP_CBAJ_T0028502.1 MGP_CBAJ_G0017967.1 mouse_genomes_project 11 53130081 53132514 + Tbc1d9b protein_coding processed_transcript MGP_CBAJ_T0012541.1 MGP_CBAJ_G0010653.1 mouse_genomes_project 11 91534232 91534858 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0031918.1 MGP_CBAJ_G0018833.1 mouse_genomes_project 11 109819670 109820066 - MGP_CBAJ_P0031918 protein_coding protein_coding MGP_CBAJ_T0029497.1 MGP_CBAJ_G0018231.1 mouse_genomes_project 11 74317510 74325225 + Myh10 protein_coding processed_transcript MGP_CBAJ_T0029498.1 MGP_CBAJ_G0018231.1 mouse_genomes_project 11 74317866 74454332 + MGP_CBAJ_P0029498 Myh10 protein_coding protein_coding MGP_CBAJ_T0029499.1 MGP_CBAJ_G0018231.1 mouse_genomes_project 11 74318029 74325384 + Myh10 protein_coding processed_transcript MGP_CBAJ_T0029500.1 MGP_CBAJ_G0018231.1 mouse_genomes_project 11 74318032 74379363 + MGP_CBAJ_P0029500 Myh10 protein_coding protein_coding MGP_CBAJ_T0029501.1 MGP_CBAJ_G0018231.1 mouse_genomes_project 11 74318063 74454312 + MGP_CBAJ_P0029501 Myh10 protein_coding protein_coding MGP_CBAJ_T0029502.1 MGP_CBAJ_G0018231.1 mouse_genomes_project 11 74318105 74402498 + Myh10 protein_coding retained_intron MGP_CBAJ_T0029503.1 MGP_CBAJ_G0018231.1 mouse_genomes_project 11 74318267 74454324 + MGP_CBAJ_P0029503 Myh10 protein_coding protein_coding MGP_CBAJ_T0029504.1 MGP_CBAJ_G0018231.1 mouse_genomes_project 11 74416286 74422931 + Myh10 protein_coding processed_transcript MGP_CBAJ_T0029505.1 MGP_CBAJ_G0018231.1 mouse_genomes_project 11 74449242 74450835 + Myh10 protein_coding processed_transcript MGP_CBAJ_T0029506.1 MGP_CBAJ_G0018231.1 mouse_genomes_project 11 74452061 74454244 + Myh10 protein_coding processed_transcript MGP_CBAJ_T0031000.1 MGP_CBAJ_G0018597.1 mouse_genomes_project 11 92660610 92672059 - MGP_CBAJ_P0031000 Dhrs11 protein_coding protein_coding MGP_CBAJ_T0031001.1 MGP_CBAJ_G0018597.1 mouse_genomes_project 11 92661746 92672089 - MGP_CBAJ_P0031001 Dhrs11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0098265.1 MGP_CBAJ_G0036536.1 mouse_genomes_project 11 107291306 107293590 - Gm11611 sense_intronic sense_intronic MGP_CBAJ_T0028632.1 MGP_CBAJ_G0018000.1 mouse_genomes_project 11 54939133 54942618 - MGP_CBAJ_P0028632 0610009B22Rik protein_coding protein_coding MGP_CBAJ_T0028633.1 MGP_CBAJ_G0018000.1 mouse_genomes_project 11 54939133 54942397 - MGP_CBAJ_P0028633 0610009B22Rik protein_coding protein_coding MGP_CBAJ_T0028785.1 MGP_CBAJ_G0018040.1 mouse_genomes_project 11 58066299 58123653 + MGP_CBAJ_P0028785 Acsl6 protein_coding protein_coding MGP_CBAJ_T0028786.1 MGP_CBAJ_G0018040.1 mouse_genomes_project 11 58066316 58088088 + MGP_CBAJ_P0028786 Acsl6 protein_coding protein_coding MGP_CBAJ_T0028787.1 MGP_CBAJ_G0018040.1 mouse_genomes_project 11 58066496 58126887 + MGP_CBAJ_P0028787 Acsl6 protein_coding protein_coding MGP_CBAJ_T0028788.1 MGP_CBAJ_G0018040.1 mouse_genomes_project 11 58066496 58123657 + MGP_CBAJ_P0028788 Acsl6 protein_coding protein_coding MGP_CBAJ_T0028789.1 MGP_CBAJ_G0018040.1 mouse_genomes_project 11 58066579 58126892 + MGP_CBAJ_P0028789 Acsl6 protein_coding protein_coding MGP_CBAJ_T0028790.1 MGP_CBAJ_G0018040.1 mouse_genomes_project 11 58075965 58087541 + MGP_CBAJ_P0028790 Acsl6 protein_coding protein_coding MGP_CBAJ_T0028791.1 MGP_CBAJ_G0018040.1 mouse_genomes_project 11 58077294 58099469 + MGP_CBAJ_P0028791 Acsl6 protein_coding protein_coding MGP_CBAJ_T0028792.1 MGP_CBAJ_G0018040.1 mouse_genomes_project 11 58077294 58101034 + MGP_CBAJ_P0028792 Acsl6 protein_coding protein_coding MGP_CBAJ_T0028793.1 MGP_CBAJ_G0018040.1 mouse_genomes_project 11 58082508 58100812 + MGP_CBAJ_P0028793 Acsl6 protein_coding protein_coding MGP_CBAJ_T0028794.1 MGP_CBAJ_G0018040.1 mouse_genomes_project 11 58097238 58123657 + Acsl6 protein_coding processed_transcript MGP_CBAJ_T0028795.1 MGP_CBAJ_G0018040.1 mouse_genomes_project 11 58107656 58123646 + MGP_CBAJ_P0028795 Acsl6 protein_coding protein_coding MGP_CBAJ_T0099943.1 MGP_CBAJ_G0038198.1 mouse_genomes_project 11 84579838 84579970 - Gm23132 snoRNA snoRNA MGP_CBAJ_T0009578.1 MGP_CBAJ_G0007716.1 mouse_genomes_project 11 75476889 75476972 + Mir1934 miRNA miRNA MGP_CBAJ_T0012416.1 MGP_CBAJ_G0010528.1 mouse_genomes_project 11 41379910 41380553 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006281.1 MGP_CBAJ_G0005227.1 mouse_genomes_project 11 130294487 130295467 + Gm11729 lincRNA lincRNA MGP_CBAJ_T0030218.1 MGP_CBAJ_G0018387.1 mouse_genomes_project 11 79655134 79661840 + MGP_CBAJ_P0030218 Olfr20 protein_coding protein_coding MGP_CBAJ_T0030219.1 MGP_CBAJ_G0018387.1 mouse_genomes_project 11 79658036 79661792 + MGP_CBAJ_P0030219 Olfr20 protein_coding protein_coding MGP_CBAJ_T0030587.1 MGP_CBAJ_G0018483.1 mouse_genomes_project 11 85019519 85025106 + MGP_CBAJ_P0030587 Dhrs13 protein_coding protein_coding MGP_CBAJ_T0030588.1 MGP_CBAJ_G0018483.1 mouse_genomes_project 11 85019588 85025031 + MGP_CBAJ_P0030588 Dhrs13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030589.1 MGP_CBAJ_G0018483.1 mouse_genomes_project 11 85019591 85025104 + MGP_CBAJ_P0030589 Dhrs13 protein_coding protein_coding MGP_CBAJ_T0030590.1 MGP_CBAJ_G0018483.1 mouse_genomes_project 11 85019598 85020717 + MGP_CBAJ_P0030590 Dhrs13 protein_coding protein_coding MGP_CBAJ_T0006293.1 MGP_CBAJ_G0005239.1 mouse_genomes_project 11 135251533 135258745 + Gm12589 lincRNA lincRNA MGP_CBAJ_T0012583.1 MGP_CBAJ_G0010695.1 mouse_genomes_project 11 113309775 113310096 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012375.1 MGP_CBAJ_G0010487.1 mouse_genomes_project 11 21827620 21829524 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0031898.1 MGP_CBAJ_G0018815.1 mouse_genomes_project 11 109526844 109532395 - MGP_CBAJ_P0031898 Krt27 protein_coding protein_coding MGP_CBAJ_T0031097.1 MGP_CBAJ_G0018616.1 mouse_genomes_project 11 94593158 94615865 + MGP_CBAJ_P0031097 Tubd1 protein_coding protein_coding MGP_CBAJ_T0031098.1 MGP_CBAJ_G0018616.1 mouse_genomes_project 11 94593158 94615866 + MGP_CBAJ_P0031098 Tubd1 protein_coding protein_coding MGP_CBAJ_T0031099.1 MGP_CBAJ_G0018616.1 mouse_genomes_project 11 94593158 94615866 + MGP_CBAJ_P0031099 Tubd1 protein_coding protein_coding MGP_CBAJ_T0031100.1 MGP_CBAJ_G0018616.1 mouse_genomes_project 11 94593158 94615866 + MGP_CBAJ_P0031100 Tubd1 protein_coding protein_coding MGP_CBAJ_T0031101.1 MGP_CBAJ_G0018616.1 mouse_genomes_project 11 94603552 94615866 + MGP_CBAJ_P0031101 Tubd1 protein_coding protein_coding MGP_CBAJ_T0006212.1 MGP_CBAJ_G0005178.1 mouse_genomes_project 11 95160158 95160860 - Gm11479 lincRNA lincRNA MGP_CBAJ_T0006226.1 MGP_CBAJ_G0005188.1 mouse_genomes_project 11 98767716 98776417 - Gm11494 lincRNA lincRNA MGP_CBAJ_T0003170.1 MGP_CBAJ_G0002939.1 mouse_genomes_project 11 89041899 89051042 + Gm11418 antisense antisense MGP_CBAJ_T0032487.1 MGP_CBAJ_G0018974.1 mouse_genomes_project 11 113966536 113996594 - MGP_CBAJ_P0032487 Plcd3 protein_coding protein_coding MGP_CBAJ_T0032488.1 MGP_CBAJ_G0018974.1 mouse_genomes_project 11 113966536 113977704 - MGP_CBAJ_P0032488 Plcd3 protein_coding protein_coding MGP_CBAJ_T0032489.1 MGP_CBAJ_G0018974.1 mouse_genomes_project 11 113966817 113967983 - Plcd3 protein_coding processed_transcript MGP_CBAJ_T0032490.1 MGP_CBAJ_G0018974.1 mouse_genomes_project 11 113979967 113996554 - Plcd3 protein_coding processed_transcript MGP_CBAJ_T0032491.1 MGP_CBAJ_G0018974.1 mouse_genomes_project 11 113981163 113996527 - Plcd3 protein_coding processed_transcript MGP_CBAJ_T0012438.1 MGP_CBAJ_G0010550.1 mouse_genomes_project 11 51909985 51910295 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0029507.1 MGP_CBAJ_G0018232.1 mouse_genomes_project 11 74459133 74498775 - MGP_CBAJ_P0029507 Ndel1 protein_coding protein_coding MGP_CBAJ_T0029508.1 MGP_CBAJ_G0018232.1 mouse_genomes_project 11 74459809 74483967 - Ndel1 protein_coding processed_transcript MGP_CBAJ_T0029509.1 MGP_CBAJ_G0018232.1 mouse_genomes_project 11 74469038 74521152 - MGP_CBAJ_P0029509 Ndel1 protein_coding protein_coding MGP_CBAJ_T0029510.1 MGP_CBAJ_G0018232.1 mouse_genomes_project 11 74469053 74498681 - MGP_CBAJ_P0029510 Ndel1 protein_coding protein_coding MGP_CBAJ_T0029511.1 MGP_CBAJ_G0018232.1 mouse_genomes_project 11 74478691 74505676 - Ndel1 protein_coding processed_transcript MGP_CBAJ_T0029512.1 MGP_CBAJ_G0018232.1 mouse_genomes_project 11 74483960 74510656 - Ndel1 protein_coding processed_transcript MGP_CBAJ_T0016979.1 MGP_CBAJ_G0014934.1 mouse_genomes_project 11 103950524 103966016 + Gm11542 processed_transcript processed_transcript MGP_CBAJ_T0028442.1 MGP_CBAJ_G0017948.1 mouse_genomes_project 11 52083896 52102612 + MGP_CBAJ_P0028442 Mgat1 protein_coding protein_coding MGP_CBAJ_T0028443.1 MGP_CBAJ_G0017948.1 mouse_genomes_project 11 52083951 52102617 + MGP_CBAJ_P0028443 Mgat1 protein_coding protein_coding MGP_CBAJ_T0028444.1 MGP_CBAJ_G0017948.1 mouse_genomes_project 11 52084114 52085166 + Mgat1 protein_coding processed_transcript MGP_CBAJ_T0028445.1 MGP_CBAJ_G0017948.1 mouse_genomes_project 11 52084272 52085123 + Mgat1 protein_coding processed_transcript MGP_CBAJ_T0028446.1 MGP_CBAJ_G0017948.1 mouse_genomes_project 11 52084936 52100281 + Mgat1 protein_coding processed_transcript MGP_CBAJ_T0028447.1 MGP_CBAJ_G0017948.1 mouse_genomes_project 11 52087182 52102585 + MGP_CBAJ_P0028447 Mgat1 protein_coding protein_coding MGP_CBAJ_T0028448.1 MGP_CBAJ_G0017948.1 mouse_genomes_project 11 52087188 52100412 + Mgat1 protein_coding processed_transcript MGP_CBAJ_T0028449.1 MGP_CBAJ_G0017948.1 mouse_genomes_project 11 52088662 52091345 + Mgat1 protein_coding processed_transcript MGP_CBAJ_T0028450.1 MGP_CBAJ_G0017948.1 mouse_genomes_project 11 52090219 52102620 + MGP_CBAJ_P0028450 Mgat1 protein_coding protein_coding MGP_CBAJ_T0028451.1 MGP_CBAJ_G0017948.1 mouse_genomes_project 11 52090272 52097680 + Mgat1 protein_coding processed_transcript MGP_CBAJ_T0028452.1 MGP_CBAJ_G0017948.1 mouse_genomes_project 11 52090279 52100281 + Mgat1 protein_coding processed_transcript MGP_CBAJ_T0028453.1 MGP_CBAJ_G0017948.1 mouse_genomes_project 11 52090297 52100881 + MGP_CBAJ_P0028453 Mgat1 protein_coding protein_coding MGP_CBAJ_T0028454.1 MGP_CBAJ_G0017948.1 mouse_genomes_project 11 52095951 52097542 + Mgat1 protein_coding processed_transcript MGP_CBAJ_T0031179.1 MGP_CBAJ_G0018635.1 mouse_genomes_project 11 95944223 95950439 + MGP_CBAJ_P0031179 Supt4a protein_coding nonsense_mediated_decay MGP_CBAJ_T0031180.1 MGP_CBAJ_G0018635.1 mouse_genomes_project 11 95944223 95950439 + MGP_CBAJ_P0031180 Supt4a protein_coding protein_coding MGP_CBAJ_T0031181.1 MGP_CBAJ_G0018635.1 mouse_genomes_project 11 95944224 95950439 + MGP_CBAJ_P0031181 Supt4a protein_coding nonsense_mediated_decay MGP_CBAJ_T0031134.1 MGP_CBAJ_G0018627.1 mouse_genomes_project 11 95338311 95488159 - MGP_CBAJ_P0031134 Ppm1e protein_coding protein_coding MGP_CBAJ_T0031135.1 MGP_CBAJ_G0018627.1 mouse_genomes_project 11 95354603 95487773 - Ppm1e protein_coding processed_transcript MGP_CBAJ_T0006165.1 MGP_CBAJ_G0005145.1 mouse_genomes_project 11 68343067 68347788 + B130011K05Rik lincRNA lincRNA MGP_CBAJ_T0099919.1 MGP_CBAJ_G0038174.1 mouse_genomes_project 11 51387425 51387544 + Gm24422 snoRNA snoRNA MGP_CBAJ_T0028283.1 MGP_CBAJ_G0017899.1 mouse_genomes_project 11 45493019 45499020 + MGP_CBAJ_P0028283 Slu7 protein_coding protein_coding MGP_CBAJ_T0028284.1 MGP_CBAJ_G0017899.1 mouse_genomes_project 11 45493019 45506136 + MGP_CBAJ_P0028284 Slu7 protein_coding protein_coding MGP_CBAJ_T0028285.1 MGP_CBAJ_G0017899.1 mouse_genomes_project 11 45493034 45508732 + MGP_CBAJ_P0028285 Slu7 protein_coding protein_coding MGP_CBAJ_T0028286.1 MGP_CBAJ_G0017899.1 mouse_genomes_project 11 45498086 45508732 + MGP_CBAJ_P0028286 Slu7 protein_coding protein_coding MGP_CBAJ_T0028287.1 MGP_CBAJ_G0017899.1 mouse_genomes_project 11 45498118 45499953 + Slu7 protein_coding processed_transcript MGP_CBAJ_T0028288.1 MGP_CBAJ_G0017899.1 mouse_genomes_project 11 45502157 45503383 + Slu7 protein_coding processed_transcript MGP_CBAJ_T0012548.1 MGP_CBAJ_G0010660.1 mouse_genomes_project 11 95164689 95165160 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0031492.1 MGP_CBAJ_G0018713.1 mouse_genomes_project 11 105139672 105209112 + MGP_CBAJ_P0031492 Zfp652 protein_coding protein_coding MGP_CBAJ_T0031493.1 MGP_CBAJ_G0018713.1 mouse_genomes_project 11 105143225 105277405 + MGP_CBAJ_P0031493 Zfp652 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031495.1 MGP_CBAJ_G0018713.1 mouse_genomes_project 11 105181069 105209112 + MGP_CBAJ_P0031495 Zfp652 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031496.1 MGP_CBAJ_G0018713.1 mouse_genomes_project 11 105181136 105201474 + MGP_CBAJ_P0031496 Zfp652 protein_coding protein_coding MGP_CBAJ_T0097912.1 MGP_CBAJ_G0036185.1 mouse_genomes_project 11 98822318 98822437 - n-R5s72 rRNA rRNA MGP_CBAJ_T0003110.1 MGP_CBAJ_G0002889.1 mouse_genomes_project 11 63752799 63757195 + Gm15755 antisense antisense MGP_CBAJ_T0030018.1 MGP_CBAJ_G0018342.1 mouse_genomes_project 11 76894751 77007529 + MGP_CBAJ_P0030018 Rabep1 protein_coding protein_coding MGP_CBAJ_T0030019.1 MGP_CBAJ_G0018342.1 mouse_genomes_project 11 76894755 77005719 + Rabep1 protein_coding retained_intron MGP_CBAJ_T0030020.1 MGP_CBAJ_G0018342.1 mouse_genomes_project 11 76894765 76952483 + MGP_CBAJ_P0030020 Rabep1 protein_coding protein_coding MGP_CBAJ_T0030021.1 MGP_CBAJ_G0018342.1 mouse_genomes_project 11 76894772 77005714 + MGP_CBAJ_P0030021 Rabep1 protein_coding protein_coding MGP_CBAJ_T0030022.1 MGP_CBAJ_G0018342.1 mouse_genomes_project 11 76894898 77005356 + MGP_CBAJ_P0030022 Rabep1 protein_coding protein_coding MGP_CBAJ_T0030023.1 MGP_CBAJ_G0018342.1 mouse_genomes_project 11 76894915 77005062 + MGP_CBAJ_P0030023 Rabep1 protein_coding protein_coding MGP_CBAJ_T0030024.1 MGP_CBAJ_G0018342.1 mouse_genomes_project 11 76894948 77004900 + MGP_CBAJ_P0030024 Rabep1 protein_coding protein_coding MGP_CBAJ_T0030025.1 MGP_CBAJ_G0018342.1 mouse_genomes_project 11 76894948 77004900 + MGP_CBAJ_P0030025 Rabep1 protein_coding protein_coding MGP_CBAJ_T0030979.1 MGP_CBAJ_G0018592.1 mouse_genomes_project 11 91890586 91988312 + MGP_CBAJ_P0030979 Acaca protein_coding protein_coding MGP_CBAJ_T0030980.1 MGP_CBAJ_G0018592.1 mouse_genomes_project 11 91890614 91894017 + Acaca protein_coding processed_transcript MGP_CBAJ_T0030982.1 MGP_CBAJ_G0018592.1 mouse_genomes_project 11 91941002 92011402 + Acaca protein_coding retained_intron MGP_CBAJ_T0030983.1 MGP_CBAJ_G0018592.1 mouse_genomes_project 11 91950340 92007509 + MGP_CBAJ_P0030983 Acaca protein_coding protein_coding MGP_CBAJ_T0030984.1 MGP_CBAJ_G0018592.1 mouse_genomes_project 11 91950340 91988217 + MGP_CBAJ_P0030984 Acaca protein_coding protein_coding MGP_CBAJ_T0030985.1 MGP_CBAJ_G0018592.1 mouse_genomes_project 11 91950367 91988206 + MGP_CBAJ_P0030985 Acaca protein_coding protein_coding MGP_CBAJ_T0030986.1 MGP_CBAJ_G0018592.1 mouse_genomes_project 11 91950542 92196819 + MGP_CBAJ_P0030986 Acaca protein_coding protein_coding MGP_CBAJ_T0030987.1 MGP_CBAJ_G0018592.1 mouse_genomes_project 11 92061452 92093243 + MGP_CBAJ_P0030987 Acaca protein_coding protein_coding MGP_CBAJ_T0101026.1 MGP_CBAJ_G0039260.1 mouse_genomes_project 11 20826056 20826835 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0097900.1 MGP_CBAJ_G0036173.1 mouse_genomes_project 11 22601469 22601569 - Gm23740 rRNA rRNA MGP_CBAJ_T0030228.1 MGP_CBAJ_G0018394.1 mouse_genomes_project 11 79929381 79930619 + MGP_CBAJ_P0030228 Olfr384 protein_coding protein_coding MGP_CBAJ_T0028457.1 MGP_CBAJ_G0017951.1 mouse_genomes_project 11 52207664 52208600 + MGP_CBAJ_P0028457 Olfr1390 protein_coding protein_coding MGP_CBAJ_T0032544.1 MGP_CBAJ_G0018984.1 mouse_genomes_project 11 114495352 114589113 - MGP_CBAJ_P0032544 protein_coding protein_coding MGP_CBAJ_T0003113.1 MGP_CBAJ_G0002892.1 mouse_genomes_project 11 64404940 64406237 - Med9os antisense antisense MGP_CBAJ_T0003114.1 MGP_CBAJ_G0002892.1 mouse_genomes_project 11 64404940 64406142 - Med9os antisense antisense MGP_CBAJ_T0003115.1 MGP_CBAJ_G0002892.1 mouse_genomes_project 11 64404940 64406238 - Med9os antisense antisense MGP_CBAJ_T0031926.1 MGP_CBAJ_G0018841.1 mouse_genomes_project 11 109923889 109924042 - MGP_CBAJ_P0031926 Gm14190 protein_coding protein_coding MGP_CBAJ_T0016912.1 MGP_CBAJ_G0014895.1 mouse_genomes_project 11 20666804 20670545 + Gm12043 processed_transcript processed_transcript MGP_CBAJ_T0031539.1 MGP_CBAJ_G0018729.1 mouse_genomes_project 11 105842672 105845995 + MGP_CBAJ_P0031539 Hoxb7 protein_coding protein_coding MGP_CBAJ_T0031540.1 MGP_CBAJ_G0018729.1 mouse_genomes_project 11 105844771 105845326 + Hoxb7 protein_coding processed_transcript MGP_CBAJ_T0101566.1 MGP_CBAJ_G0039598.1 mouse_genomes_project 11 110286262 110286502 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0028478.1 MGP_CBAJ_G0017963.1 mouse_genomes_project 11 52734520 52748118 + Gfpt2 protein_coding retained_intron MGP_CBAJ_T0028479.1 MGP_CBAJ_G0017963.1 mouse_genomes_project 11 52734529 52778933 + MGP_CBAJ_P0028479 Gfpt2 protein_coding protein_coding MGP_CBAJ_T0029430.1 MGP_CBAJ_G0018213.1 mouse_genomes_project 11 72549559 72553118 + protein_coding retained_intron MGP_CBAJ_T0029046.1 MGP_CBAJ_G0018134.1 mouse_genomes_project 11 64255989 64256880 - Cops3 protein_coding processed_transcript MGP_CBAJ_T0029047.1 MGP_CBAJ_G0018134.1 mouse_genomes_project 11 64255989 64279126 - MGP_CBAJ_P0029047 Cops3 protein_coding protein_coding MGP_CBAJ_T0029048.1 MGP_CBAJ_G0018134.1 mouse_genomes_project 11 64259445 64276424 - MGP_CBAJ_P0029048 Cops3 protein_coding protein_coding MGP_CBAJ_T0029049.1 MGP_CBAJ_G0018134.1 mouse_genomes_project 11 64261371 64279126 - Cops3 protein_coding processed_transcript MGP_CBAJ_T0029050.1 MGP_CBAJ_G0018134.1 mouse_genomes_project 11 64262401 64272767 - Cops3 protein_coding processed_transcript MGP_CBAJ_T0029051.1 MGP_CBAJ_G0018134.1 mouse_genomes_project 11 64264291 64279126 - Cops3 protein_coding processed_transcript MGP_CBAJ_T0029052.1 MGP_CBAJ_G0018134.1 mouse_genomes_project 11 64272564 64279040 - MGP_CBAJ_P0029052 Cops3 protein_coding protein_coding MGP_CBAJ_T0029053.1 MGP_CBAJ_G0018134.1 mouse_genomes_project 11 64276126 64279100 - Cops3 protein_coding processed_transcript MGP_CBAJ_T0012547.1 MGP_CBAJ_G0010659.1 mouse_genomes_project 11 94685888 94687200 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0033691.1 MGP_CBAJ_G0019223.1 mouse_genomes_project 11 133747163 133749905 - Arl16 protein_coding processed_transcript MGP_CBAJ_T0033692.1 MGP_CBAJ_G0019223.1 mouse_genomes_project 11 133747621 133749572 - Arl16 protein_coding processed_transcript MGP_CBAJ_T0033693.1 MGP_CBAJ_G0019223.1 mouse_genomes_project 11 133747735 133749898 - MGP_CBAJ_P0033693 Arl16 protein_coding protein_coding MGP_CBAJ_T0033694.1 MGP_CBAJ_G0019223.1 mouse_genomes_project 11 133747888 133749763 - Arl16 protein_coding processed_transcript MGP_CBAJ_T0033695.1 MGP_CBAJ_G0019223.1 mouse_genomes_project 11 133747895 133749632 - Arl16 protein_coding processed_transcript MGP_CBAJ_T0033696.1 MGP_CBAJ_G0019223.1 mouse_genomes_project 11 133747910 133749718 - Arl16 protein_coding processed_transcript MGP_CBAJ_T0033697.1 MGP_CBAJ_G0019223.1 mouse_genomes_project 11 133748051 133749779 - Arl16 protein_coding processed_transcript MGP_CBAJ_T0033698.1 MGP_CBAJ_G0019223.1 mouse_genomes_project 11 133748065 133749719 - Arl16 protein_coding processed_transcript MGP_CBAJ_T0033699.1 MGP_CBAJ_G0019223.1 mouse_genomes_project 11 133748067 133749694 - Arl16 protein_coding processed_transcript MGP_CBAJ_T0033700.1 MGP_CBAJ_G0019223.1 mouse_genomes_project 11 133748212 133749731 - Arl16 protein_coding processed_transcript MGP_CBAJ_T0033701.1 MGP_CBAJ_G0019223.1 mouse_genomes_project 11 133749202 133749751 - Arl16 protein_coding processed_transcript MGP_CBAJ_T0012553.1 MGP_CBAJ_G0010665.1 mouse_genomes_project 11 96707129 96707454 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099960.1 MGP_CBAJ_G0038215.1 mouse_genomes_project 11 115309776 115309909 - Gm22743 snoRNA snoRNA MGP_CBAJ_T0012349.1 MGP_CBAJ_G0010461.1 mouse_genomes_project 11 15924063 15924218 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0029981.1 MGP_CBAJ_G0018334.1 mouse_genomes_project 11 76655817 76658606 - MGP_CBAJ_P0029981 Pfn1 protein_coding protein_coding MGP_CBAJ_T0029982.1 MGP_CBAJ_G0018334.1 mouse_genomes_project 11 76655900 76658583 - MGP_CBAJ_P0029982 Pfn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029983.1 MGP_CBAJ_G0018334.1 mouse_genomes_project 11 76656573 76658570 - Pfn1 protein_coding retained_intron MGP_CBAJ_T0029984.1 MGP_CBAJ_G0018334.1 mouse_genomes_project 11 76656583 76658560 - MGP_CBAJ_P0029984 Pfn1 protein_coding protein_coding MGP_CBAJ_T0099957.1 MGP_CBAJ_G0038212.1 mouse_genomes_project 11 109114841 109114956 + Gm26394 snoRNA snoRNA MGP_CBAJ_T0003059.1 MGP_CBAJ_G0002843.1 mouse_genomes_project 11 17927175 17928510 + Gm16141 antisense antisense MGP_CBAJ_T0099968.1 MGP_CBAJ_G0038223.1 mouse_genomes_project 11 132933204 132933284 + Gm23663 snoRNA snoRNA MGP_CBAJ_T0027601.1 MGP_CBAJ_G0017737.1 mouse_genomes_project 11 3345381 3360577 - MGP_CBAJ_P0027601 Polm protein_coding protein_coding MGP_CBAJ_T0027602.1 MGP_CBAJ_G0017737.1 mouse_genomes_project 11 3345382 3360804 - MGP_CBAJ_P0027602 Polm protein_coding protein_coding MGP_CBAJ_T0027603.1 MGP_CBAJ_G0017737.1 mouse_genomes_project 11 3346736 3347722 - Polm protein_coding processed_transcript MGP_CBAJ_T0027604.1 MGP_CBAJ_G0017737.1 mouse_genomes_project 11 3357581 3359273 - Polm protein_coding processed_transcript MGP_CBAJ_T0027605.1 MGP_CBAJ_G0017737.1 mouse_genomes_project 11 3359065 3360540 - Polm protein_coding processed_transcript MGP_CBAJ_T0027606.1 MGP_CBAJ_G0017737.1 mouse_genomes_project 11 3359088 3360581 - Polm protein_coding processed_transcript MGP_CBAJ_T0101560.1 MGP_CBAJ_G0039592.1 mouse_genomes_project 11 104162147 104162884 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0003267.1 MGP_CBAJ_G0003015.1 mouse_genomes_project 11 126525173 126526439 - 1700001J04Rik antisense antisense MGP_CBAJ_T0003268.1 MGP_CBAJ_G0003015.1 mouse_genomes_project 11 126525634 126526336 - 1700001J04Rik antisense antisense MGP_CBAJ_T0029404.1 MGP_CBAJ_G0018206.1 mouse_genomes_project 11 71038145 71407731 - MGP_CBAJ_P0029404 Dnah9 protein_coding protein_coding MGP_CBAJ_T0029405.1 MGP_CBAJ_G0018206.1 mouse_genomes_project 11 71038266 71228626 - MGP_CBAJ_P0029405 Dnah9 protein_coding protein_coding MGP_CBAJ_T0029406.1 MGP_CBAJ_G0018206.1 mouse_genomes_project 11 71059862 71066068 - Dnah9 protein_coding retained_intron MGP_CBAJ_T0029407.1 MGP_CBAJ_G0018206.1 mouse_genomes_project 11 71112078 71137816 - MGP_CBAJ_P0029407 Dnah9 protein_coding protein_coding MGP_CBAJ_T0029408.1 MGP_CBAJ_G0018206.1 mouse_genomes_project 11 71348615 71407642 - MGP_CBAJ_P0029408 Dnah9 protein_coding protein_coding MGP_CBAJ_T0029409.1 MGP_CBAJ_G0018206.1 mouse_genomes_project 11 71397946 71407749 - Dnah9 protein_coding retained_intron MGP_CBAJ_T0031919.1 MGP_CBAJ_G0018834.1 mouse_genomes_project 11 109823887 109827457 - MGP_CBAJ_P0031919 protein_coding protein_coding MGP_CBAJ_T0029664.1 MGP_CBAJ_G0018267.1 mouse_genomes_project 11 75426777 75428624 + MGP_CBAJ_P0029664 Sat2 protein_coding protein_coding MGP_CBAJ_T0029665.1 MGP_CBAJ_G0018267.1 mouse_genomes_project 11 75426805 75428212 + Sat2 protein_coding retained_intron MGP_CBAJ_T0029666.1 MGP_CBAJ_G0018267.1 mouse_genomes_project 11 75426805 75428624 + MGP_CBAJ_P0029666 Sat2 protein_coding protein_coding MGP_CBAJ_T0033828.1 MGP_CBAJ_G0019249.1 mouse_genomes_project 11 134106048 134113251 - MGP_CBAJ_P0033828 Dus1l protein_coding protein_coding MGP_CBAJ_T0033829.1 MGP_CBAJ_G0019249.1 mouse_genomes_project 11 134106049 134107295 - Dus1l protein_coding retained_intron MGP_CBAJ_T0033830.1 MGP_CBAJ_G0019249.1 mouse_genomes_project 11 134106049 134113243 - MGP_CBAJ_P0033830 Dus1l protein_coding protein_coding MGP_CBAJ_T0033831.1 MGP_CBAJ_G0019249.1 mouse_genomes_project 11 134106049 134113243 - MGP_CBAJ_P0033831 Dus1l protein_coding protein_coding MGP_CBAJ_T0033832.1 MGP_CBAJ_G0019249.1 mouse_genomes_project 11 134106051 134106698 - Dus1l protein_coding retained_intron MGP_CBAJ_T0033833.1 MGP_CBAJ_G0019249.1 mouse_genomes_project 11 134106053 134113237 - Dus1l protein_coding retained_intron MGP_CBAJ_T0033834.1 MGP_CBAJ_G0019249.1 mouse_genomes_project 11 134106053 134113246 - MGP_CBAJ_P0033834 Dus1l protein_coding protein_coding MGP_CBAJ_T0033835.1 MGP_CBAJ_G0019249.1 mouse_genomes_project 11 134109621 134113225 - MGP_CBAJ_P0033835 Dus1l protein_coding protein_coding MGP_CBAJ_T0033836.1 MGP_CBAJ_G0019249.1 mouse_genomes_project 11 134110692 134113241 - MGP_CBAJ_P0033836 Dus1l protein_coding protein_coding MGP_CBAJ_T0029533.1 MGP_CBAJ_G0018238.1 mouse_genomes_project 11 74665348 74668050 - Rangrf protein_coding processed_transcript MGP_CBAJ_T0029534.1 MGP_CBAJ_G0018238.1 mouse_genomes_project 11 74665348 74665877 - Rangrf protein_coding processed_transcript MGP_CBAJ_T0029535.1 MGP_CBAJ_G0018238.1 mouse_genomes_project 11 74665348 74666654 - Rangrf protein_coding processed_transcript MGP_CBAJ_T0029536.1 MGP_CBAJ_G0018238.1 mouse_genomes_project 11 74665348 74666708 - MGP_CBAJ_P0029536 Rangrf protein_coding protein_coding MGP_CBAJ_T0029537.1 MGP_CBAJ_G0018238.1 mouse_genomes_project 11 74665351 74666208 - Rangrf protein_coding processed_transcript MGP_CBAJ_T0029538.1 MGP_CBAJ_G0018238.1 mouse_genomes_project 11 74665352 74666310 - Rangrf protein_coding processed_transcript MGP_CBAJ_T0029539.1 MGP_CBAJ_G0018238.1 mouse_genomes_project 11 74665359 74666233 - Rangrf protein_coding processed_transcript MGP_CBAJ_T0029540.1 MGP_CBAJ_G0018238.1 mouse_genomes_project 11 74665362 74666061 - Rangrf protein_coding processed_transcript MGP_CBAJ_T0012388.1 MGP_CBAJ_G0010500.1 mouse_genomes_project 11 27511165 27511641 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0029182.1 MGP_CBAJ_G0018162.1 mouse_genomes_project 11 65851900 65905703 - MGP_CBAJ_P0029182 Aldh3a2 protein_coding protein_coding MGP_CBAJ_T0029183.1 MGP_CBAJ_G0018162.1 mouse_genomes_project 11 65882694 65905524 - MGP_CBAJ_P0029183 Aldh3a2 protein_coding unknown_likely_coding MGP_CBAJ_T0029184.1 MGP_CBAJ_G0018162.1 mouse_genomes_project 11 65882703 65905703 - MGP_CBAJ_P0029184 Aldh3a2 protein_coding protein_coding MGP_CBAJ_T0029185.1 MGP_CBAJ_G0018162.1 mouse_genomes_project 11 65885378 65905703 - MGP_CBAJ_P0029185 Aldh3a2 protein_coding protein_coding MGP_CBAJ_T0029186.1 MGP_CBAJ_G0018162.1 mouse_genomes_project 11 65886923 65900853 - Aldh3a2 protein_coding processed_transcript MGP_CBAJ_T0029187.1 MGP_CBAJ_G0018162.1 mouse_genomes_project 11 65894691 65905982 - Aldh3a2 protein_coding processed_transcript MGP_CBAJ_T0029188.1 MGP_CBAJ_G0018162.1 mouse_genomes_project 11 65902687 65905645 - Aldh3a2 protein_coding processed_transcript MGP_CBAJ_T0029189.1 MGP_CBAJ_G0018162.1 mouse_genomes_project 11 65903741 65905959 - Aldh3a2 protein_coding processed_transcript MGP_CBAJ_T0029426.1 MGP_CBAJ_G0018212.1 mouse_genomes_project 11 72437022 72468633 + MGP_CBAJ_P0029426 Myh3 protein_coding unknown_likely_coding MGP_CBAJ_T0029427.1 MGP_CBAJ_G0018212.1 mouse_genomes_project 11 72437023 72468758 + MGP_CBAJ_P0029427 Myh3 protein_coding protein_coding MGP_CBAJ_T0029428.1 MGP_CBAJ_G0018212.1 mouse_genomes_project 11 72437023 72468758 + MGP_CBAJ_P0029428 Myh3 protein_coding protein_coding MGP_CBAJ_T0029429.1 MGP_CBAJ_G0018212.1 mouse_genomes_project 11 72437023 72468753 + MGP_CBAJ_P0029429 Myh3 protein_coding protein_coding MGP_CBAJ_T0027671.1 MGP_CBAJ_G0017754.1 mouse_genomes_project 11 4160912 4175323 - MGP_CBAJ_P0027671 Myo1g protein_coding protein_coding MGP_CBAJ_T0027672.1 MGP_CBAJ_G0017754.1 mouse_genomes_project 11 4161038 4175262 - MGP_CBAJ_P0027672 Myo1g protein_coding nonsense_mediated_decay MGP_CBAJ_T0027673.1 MGP_CBAJ_G0017754.1 mouse_genomes_project 11 4162233 4163050 - Myo1g protein_coding retained_intron MGP_CBAJ_T0027674.1 MGP_CBAJ_G0017754.1 mouse_genomes_project 11 4167328 4175323 - Myo1g protein_coding retained_intron MGP_CBAJ_T0027675.1 MGP_CBAJ_G0017754.1 mouse_genomes_project 11 4168867 4169865 - Myo1g protein_coding retained_intron MGP_CBAJ_T0027676.1 MGP_CBAJ_G0017754.1 mouse_genomes_project 11 4172362 4175330 - MGP_CBAJ_P0027676 Myo1g protein_coding nonsense_mediated_decay MGP_CBAJ_T0027677.1 MGP_CBAJ_G0017754.1 mouse_genomes_project 11 4173411 4173869 - MGP_CBAJ_P0027677 Myo1g protein_coding protein_coding MGP_CBAJ_T0029687.1 MGP_CBAJ_G0018272.1 mouse_genomes_project 11 75480778 75487387 - MGP_CBAJ_P0029687 Eif4a1 protein_coding protein_coding MGP_CBAJ_T0029688.1 MGP_CBAJ_G0018272.1 mouse_genomes_project 11 75480782 75488753 - Eif4a1 protein_coding retained_intron MGP_CBAJ_T0029689.1 MGP_CBAJ_G0018272.1 mouse_genomes_project 11 75480783 75488753 - Eif4a1 protein_coding retained_intron MGP_CBAJ_T0029690.1 MGP_CBAJ_G0018272.1 mouse_genomes_project 11 75481159 75483759 - Eif4a1 protein_coding processed_transcript MGP_CBAJ_T0029691.1 MGP_CBAJ_G0018272.1 mouse_genomes_project 11 75481320 75483585 - Eif4a1 protein_coding processed_transcript MGP_CBAJ_T0029692.1 MGP_CBAJ_G0018272.1 mouse_genomes_project 11 75481391 75483811 - Eif4a1 protein_coding processed_transcript MGP_CBAJ_T0029693.1 MGP_CBAJ_G0018272.1 mouse_genomes_project 11 75484003 75488859 - MGP_CBAJ_P0029693 Eif4a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029694.1 MGP_CBAJ_G0018272.1 mouse_genomes_project 11 75484676 75488752 - Eif4a1 protein_coding processed_transcript MGP_CBAJ_T0029695.1 MGP_CBAJ_G0018272.1 mouse_genomes_project 11 75484684 75487319 - Eif4a1 protein_coding processed_transcript MGP_CBAJ_T0029696.1 MGP_CBAJ_G0018272.1 mouse_genomes_project 11 75485654 75488751 - Eif4a1 protein_coding processed_transcript MGP_CBAJ_T0029697.1 MGP_CBAJ_G0018272.1 mouse_genomes_project 11 75485701 75488166 - Eif4a1 protein_coding processed_transcript MGP_CBAJ_T0029698.1 MGP_CBAJ_G0018272.1 mouse_genomes_project 11 75485769 75487658 - Eif4a1 protein_coding retained_intron MGP_CBAJ_T0029699.1 MGP_CBAJ_G0018272.1 mouse_genomes_project 11 75486904 75487886 - Eif4a1 protein_coding retained_intron MGP_CBAJ_T0012327.1 MGP_CBAJ_G0010439.1 mouse_genomes_project 11 4496186 4497640 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0029156.1 MGP_CBAJ_G0018156.1 mouse_genomes_project 11 65485414 65500130 - MGP_CBAJ_P0029156 Natd1 protein_coding protein_coding MGP_CBAJ_T0029157.1 MGP_CBAJ_G0018156.1 mouse_genomes_project 11 65489126 65501070 - Natd1 protein_coding processed_transcript MGP_CBAJ_T0012595.1 MGP_CBAJ_G0010707.1 mouse_genomes_project 11 117169560 117170569 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0031670.1 MGP_CBAJ_G0018761.1 mouse_genomes_project 11 107468695 107494588 + MGP_CBAJ_P0031670 Mllt6 protein_coding protein_coding MGP_CBAJ_T0031671.1 MGP_CBAJ_G0018761.1 mouse_genomes_project 11 107469312 107491660 + Mllt6 protein_coding processed_transcript MGP_CBAJ_T0031672.1 MGP_CBAJ_G0018761.1 mouse_genomes_project 11 107469312 107494599 + MGP_CBAJ_P0031672 Mllt6 protein_coding protein_coding MGP_CBAJ_T0031673.1 MGP_CBAJ_G0018761.1 mouse_genomes_project 11 107469358 107480657 + Mllt6 protein_coding processed_transcript MGP_CBAJ_T0031674.1 MGP_CBAJ_G0018761.1 mouse_genomes_project 11 107483160 107485314 + Mllt6 protein_coding processed_transcript MGP_CBAJ_T0031675.1 MGP_CBAJ_G0018761.1 mouse_genomes_project 11 107483160 107485314 + Mllt6 protein_coding processed_transcript MGP_CBAJ_T0028841.1 MGP_CBAJ_G0018050.1 mouse_genomes_project 11 58885989 58916987 - MGP_CBAJ_P0028841 Ccdc69 protein_coding protein_coding MGP_CBAJ_T0028842.1 MGP_CBAJ_G0018050.1 mouse_genomes_project 11 58886989 58917011 - MGP_CBAJ_P0028842 Ccdc69 protein_coding protein_coding MGP_CBAJ_T0012447.1 MGP_CBAJ_G0010559.1 mouse_genomes_project 11 55521285 55521438 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012448.1 MGP_CBAJ_G0010560.1 mouse_genomes_project 11 55810632 55810795 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003086.1 MGP_CBAJ_G0002868.1 mouse_genomes_project 11 55318804 55319863 + Gm12204 antisense antisense MGP_CBAJ_T0012310.1 MGP_CBAJ_G0010422.1 mouse_genomes_project 11 766482 768492 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031762.1 MGP_CBAJ_G0018781.1 mouse_genomes_project 11 108288376 108310851 + MGP_CBAJ_P0031762 Stard3 protein_coding protein_coding MGP_CBAJ_T0031763.1 MGP_CBAJ_G0018781.1 mouse_genomes_project 11 108288438 108306582 + Stard3 protein_coding processed_transcript MGP_CBAJ_T0031764.1 MGP_CBAJ_G0018781.1 mouse_genomes_project 11 108288439 108310864 + Stard3 protein_coding processed_transcript MGP_CBAJ_T0031765.1 MGP_CBAJ_G0018781.1 mouse_genomes_project 11 108288452 108306587 + Stard3 protein_coding processed_transcript MGP_CBAJ_T0031766.1 MGP_CBAJ_G0018781.1 mouse_genomes_project 11 108305271 108308400 + Stard3 protein_coding processed_transcript MGP_CBAJ_T0031767.1 MGP_CBAJ_G0018781.1 mouse_genomes_project 11 108306198 108307981 + Stard3 protein_coding processed_transcript MGP_CBAJ_T0031768.1 MGP_CBAJ_G0018781.1 mouse_genomes_project 11 108307907 108309100 + Stard3 protein_coding processed_transcript MGP_CBAJ_T0009585.1 MGP_CBAJ_G0007723.1 mouse_genomes_project 11 76385741 76385805 + Mir7115 miRNA miRNA MGP_CBAJ_T0012356.1 MGP_CBAJ_G0010468.1 mouse_genomes_project 11 18306320 18306464 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0033772.1 MGP_CBAJ_G0019239.1 mouse_genomes_project 11 133947649 133949777 - MGP_CBAJ_P0033772 Myadml2 protein_coding protein_coding MGP_CBAJ_T0033773.1 MGP_CBAJ_G0019239.1 mouse_genomes_project 11 133947650 133948701 - Myadml2 protein_coding processed_transcript MGP_CBAJ_T0009600.1 MGP_CBAJ_G0007738.1 mouse_genomes_project 11 85067899 85067971 + Mir451a miRNA miRNA MGP_CBAJ_T0033910.1 MGP_CBAJ_G0019267.1 mouse_genomes_project 11 134816795 134826627 + MGP_CBAJ_P0033910 Fn3krp protein_coding protein_coding MGP_CBAJ_T0028460.1 MGP_CBAJ_G0017954.1 mouse_genomes_project 11 52328296 52329232 + MGP_CBAJ_P0028460 Olfr1387 protein_coding protein_coding MGP_CBAJ_T0029360.1 MGP_CBAJ_G0018192.1 mouse_genomes_project 11 67738657 67754226 + MGP_CBAJ_P0029360 Tvp23b protein_coding protein_coding MGP_CBAJ_T0029361.1 MGP_CBAJ_G0018192.1 mouse_genomes_project 11 67738692 67751086 + Tvp23b protein_coding processed_transcript MGP_CBAJ_T0029362.1 MGP_CBAJ_G0018192.1 mouse_genomes_project 11 67738816 67744390 + Tvp23b protein_coding processed_transcript MGP_CBAJ_T0029363.1 MGP_CBAJ_G0018192.1 mouse_genomes_project 11 67742851 67777010 + Tvp23b protein_coding processed_transcript MGP_CBAJ_T0012503.1 MGP_CBAJ_G0010615.1 mouse_genomes_project 11 76490413 76490732 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012490.1 MGP_CBAJ_G0010602.1 mouse_genomes_project 11 70170163 70170653 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006269.1 MGP_CBAJ_G0005219.1 mouse_genomes_project 11 126597437 126598726 + Gm11691 lincRNA lincRNA MGP_CBAJ_T0030690.1 MGP_CBAJ_G0018507.1 mouse_genomes_project 11 85600716 85602351 + MGP_CBAJ_P0030690 Sebox protein_coding protein_coding MGP_CBAJ_T0030691.1 MGP_CBAJ_G0018507.1 mouse_genomes_project 11 85600768 85602344 + MGP_CBAJ_P0030691 Sebox protein_coding protein_coding MGP_CBAJ_T0031583.1 MGP_CBAJ_G0018740.1 mouse_genomes_project 11 106483593 106485324 + Copz2 protein_coding retained_intron MGP_CBAJ_T0031584.1 MGP_CBAJ_G0018740.1 mouse_genomes_project 11 106483599 106496141 + MGP_CBAJ_P0031584 Copz2 protein_coding protein_coding MGP_CBAJ_T0031585.1 MGP_CBAJ_G0018740.1 mouse_genomes_project 11 106483604 106487895 + MGP_CBAJ_P0031585 Copz2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031586.1 MGP_CBAJ_G0018740.1 mouse_genomes_project 11 106487641 106490669 + Copz2 protein_coding retained_intron MGP_CBAJ_T0031587.1 MGP_CBAJ_G0018740.1 mouse_genomes_project 11 106487872 106496141 + MGP_CBAJ_P0031587 Copz2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012423.1 MGP_CBAJ_G0010535.1 mouse_genomes_project 11 43390455 43391368 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0028869.1 MGP_CBAJ_G0018061.1 mouse_genomes_project 11 61047241 61394002 + MGP_CBAJ_P0028869 Gria1 protein_coding protein_coding MGP_CBAJ_T0028870.1 MGP_CBAJ_G0018061.1 mouse_genomes_project 11 61047387 61394001 + MGP_CBAJ_P0028870 Gria1 protein_coding protein_coding MGP_CBAJ_T0028871.1 MGP_CBAJ_G0018061.1 mouse_genomes_project 11 61047465 61391385 + MGP_CBAJ_P0028871 Gria1 protein_coding protein_coding MGP_CBAJ_T0028872.1 MGP_CBAJ_G0018061.1 mouse_genomes_project 11 61236226 61251287 + Gria1 protein_coding processed_transcript MGP_CBAJ_T0028414.1 MGP_CBAJ_G0017941.1 mouse_genomes_project 11 51894545 51918723 + MGP_CBAJ_P0028414 Ifi47 protein_coding protein_coding MGP_CBAJ_T0028415.1 MGP_CBAJ_G0017941.1 mouse_genomes_project 11 51906540 51917185 + Ifi47 protein_coding processed_transcript MGP_CBAJ_T0028417.1 MGP_CBAJ_G0017941.1 mouse_genomes_project 11 51906879 51918721 + MGP_CBAJ_P0028417 Ifi47 protein_coding protein_coding MGP_CBAJ_T0028174.1 MGP_CBAJ_G0017870.1 mouse_genomes_project 11 34068960 34071800 - MGP_CBAJ_P0028174 Tlx3 protein_coding protein_coding MGP_CBAJ_T0028455.1 MGP_CBAJ_G0017949.1 mouse_genomes_project 11 52141170 52148342 + MGP_CBAJ_P0028455 protein_coding protein_coding MGP_CBAJ_T0012315.1 MGP_CBAJ_G0010427.1 mouse_genomes_project 11 2275180 2275674 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0033252.1 MGP_CBAJ_G0019137.1 mouse_genomes_project 11 128793970 128801016 - MGP_CBAJ_P0033252 Mrpl38 protein_coding protein_coding MGP_CBAJ_T0033253.1 MGP_CBAJ_G0019137.1 mouse_genomes_project 11 128793974 128800923 - Mrpl38 protein_coding retained_intron MGP_CBAJ_T0033254.1 MGP_CBAJ_G0019137.1 mouse_genomes_project 11 128794938 128800937 - Mrpl38 protein_coding retained_intron MGP_CBAJ_T0033255.1 MGP_CBAJ_G0019137.1 mouse_genomes_project 11 128796207 128796602 - Mrpl38 protein_coding retained_intron MGP_CBAJ_T0033256.1 MGP_CBAJ_G0019137.1 mouse_genomes_project 11 128796401 128796773 - Mrpl38 protein_coding retained_intron MGP_CBAJ_T0033257.1 MGP_CBAJ_G0019137.1 mouse_genomes_project 11 128799927 128801013 - Mrpl38 protein_coding retained_intron MGP_CBAJ_T0027380.1 MGP_CBAJ_G0017687.1 mouse_genomes_project 11 596573 602456 + MGP_CBAJ_P0027380 Pla2g3 protein_coding protein_coding MGP_CBAJ_T0027381.1 MGP_CBAJ_G0017687.1 mouse_genomes_project 11 596588 610662 + MGP_CBAJ_P0027381 Pla2g3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027382.1 MGP_CBAJ_G0017687.1 mouse_genomes_project 11 597279 602453 + Pla2g3 protein_coding retained_intron MGP_CBAJ_T0030900.1 MGP_CBAJ_G0018567.1 mouse_genomes_project 11 90877244 90905813 + MGP_CBAJ_P0030900 Slfn3 protein_coding protein_coding MGP_CBAJ_T0027347.1 MGP_CBAJ_G0017683.1 mouse_genomes_project 11 370238 381494 + MGP_CBAJ_P0027347 Patz1 protein_coding protein_coding MGP_CBAJ_T0027348.1 MGP_CBAJ_G0017683.1 mouse_genomes_project 11 370684 395169 + MGP_CBAJ_P0027348 Patz1 protein_coding protein_coding MGP_CBAJ_T0027349.1 MGP_CBAJ_G0017683.1 mouse_genomes_project 11 370859 394152 + MGP_CBAJ_P0027349 Patz1 protein_coding protein_coding MGP_CBAJ_T0027350.1 MGP_CBAJ_G0017683.1 mouse_genomes_project 11 371704 394228 + Patz1 protein_coding processed_transcript MGP_CBAJ_T0027351.1 MGP_CBAJ_G0017683.1 mouse_genomes_project 11 372440 374914 + Patz1 protein_coding processed_transcript MGP_CBAJ_T0027352.1 MGP_CBAJ_G0017683.1 mouse_genomes_project 11 373113 375141 + Patz1 protein_coding processed_transcript MGP_CBAJ_T0027353.1 MGP_CBAJ_G0017683.1 mouse_genomes_project 11 373525 395169 + Patz1 protein_coding processed_transcript MGP_CBAJ_T0027354.1 MGP_CBAJ_G0017683.1 mouse_genomes_project 11 373525 395169 + MGP_CBAJ_P0027354 Patz1 protein_coding protein_coding MGP_CBAJ_T0027355.1 MGP_CBAJ_G0017683.1 mouse_genomes_project 11 384348 393753 + MGP_CBAJ_P0027355 Patz1 protein_coding protein_coding MGP_CBAJ_T0003105.1 MGP_CBAJ_G0002885.1 mouse_genomes_project 11 62322554 62325017 + Gm12246 antisense antisense MGP_CBAJ_T0032727.1 MGP_CBAJ_G0019030.1 mouse_genomes_project 11 118064215 118136605 - MGP_CBAJ_P0032727 Pecam1 protein_coding protein_coding MGP_CBAJ_T0032728.1 MGP_CBAJ_G0019030.1 mouse_genomes_project 11 118064220 118136815 - MGP_CBAJ_P0032728 Pecam1 protein_coding protein_coding MGP_CBAJ_T0032729.1 MGP_CBAJ_G0019030.1 mouse_genomes_project 11 118071149 118073265 - Pecam1 protein_coding retained_intron MGP_CBAJ_T0032730.1 MGP_CBAJ_G0019030.1 mouse_genomes_project 11 118071756 118183112 - MGP_CBAJ_P0032730 Pecam1 protein_coding protein_coding MGP_CBAJ_T0032731.1 MGP_CBAJ_G0019030.1 mouse_genomes_project 11 118103422 118107687 - Pecam1 protein_coding retained_intron MGP_CBAJ_T0032732.1 MGP_CBAJ_G0019030.1 mouse_genomes_project 11 118107422 118136499 - MGP_CBAJ_P0032732 Pecam1 protein_coding protein_coding MGP_CBAJ_T0009566.1 MGP_CBAJ_G0007704.1 mouse_genomes_project 11 64688281 64688361 - Mir6921 miRNA miRNA MGP_CBAJ_T0033761.1 MGP_CBAJ_G0019237.1 mouse_genomes_project 11 133924651 133933083 - MGP_CBAJ_P0033761 Mafg protein_coding protein_coding MGP_CBAJ_T0033762.1 MGP_CBAJ_G0019237.1 mouse_genomes_project 11 133928533 133930324 - MGP_CBAJ_P0033762 Mafg protein_coding protein_coding MGP_CBAJ_T0033763.1 MGP_CBAJ_G0019237.1 mouse_genomes_project 11 133928667 133930163 - MGP_CBAJ_P0033763 Mafg protein_coding protein_coding MGP_CBAJ_T0033764.1 MGP_CBAJ_G0019237.1 mouse_genomes_project 11 133928758 133929675 - MGP_CBAJ_P0033764 Mafg protein_coding protein_coding MGP_CBAJ_T0033765.1 MGP_CBAJ_G0019237.1 mouse_genomes_project 11 133930750 133933039 - Mafg protein_coding processed_transcript MGP_CBAJ_T0028082.1 MGP_CBAJ_G0017846.1 mouse_genomes_project 11 31402439 31619604 + MGP_CBAJ_P0028082 Asb3 protein_coding protein_coding MGP_CBAJ_T0028088.1 MGP_CBAJ_G0017846.1 mouse_genomes_project 11 31479584 31620973 + MGP_CBAJ_P0028088 Asb3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028089.1 MGP_CBAJ_G0017846.1 mouse_genomes_project 11 31479597 31604434 + MGP_CBAJ_P0028089 Asb3 protein_coding protein_coding MGP_CBAJ_T0028090.1 MGP_CBAJ_G0017846.1 mouse_genomes_project 11 31479626 31554406 + Asb3 protein_coding retained_intron MGP_CBAJ_T0028093.1 MGP_CBAJ_G0017846.1 mouse_genomes_project 11 31526177 31619513 + MGP_CBAJ_P0028093 Asb3 protein_coding unknown_likely_coding MGP_CBAJ_T0028094.1 MGP_CBAJ_G0017846.1 mouse_genomes_project 11 31577353 31580386 + Asb3 protein_coding retained_intron MGP_CBAJ_T0030303.1 MGP_CBAJ_G0018425.1 mouse_genomes_project 11 81421113 81444766 - MGP_CBAJ_P0030303 Srr protein_coding protein_coding MGP_CBAJ_T0030304.1 MGP_CBAJ_G0018425.1 mouse_genomes_project 11 81421263 81444643 - Srr protein_coding processed_transcript MGP_CBAJ_T0030305.1 MGP_CBAJ_G0018425.1 mouse_genomes_project 11 81421547 81444741 - MGP_CBAJ_P0030305 Srr protein_coding protein_coding MGP_CBAJ_T0030306.1 MGP_CBAJ_G0018425.1 mouse_genomes_project 11 81421553 81444916 - MGP_CBAJ_P0030306 Srr protein_coding protein_coding MGP_CBAJ_T0030307.1 MGP_CBAJ_G0018425.1 mouse_genomes_project 11 81421573 81444741 - MGP_CBAJ_P0030307 Srr protein_coding protein_coding MGP_CBAJ_T0030308.1 MGP_CBAJ_G0018425.1 mouse_genomes_project 11 81424495 81444650 - MGP_CBAJ_P0030308 Srr protein_coding protein_coding MGP_CBAJ_T0030309.1 MGP_CBAJ_G0018425.1 mouse_genomes_project 11 81424976 81444628 - MGP_CBAJ_P0030309 Srr protein_coding protein_coding MGP_CBAJ_T0030310.1 MGP_CBAJ_G0018425.1 mouse_genomes_project 11 81425121 81444671 - Srr protein_coding retained_intron MGP_CBAJ_T0030311.1 MGP_CBAJ_G0018425.1 mouse_genomes_project 11 81425206 81444643 - Srr protein_coding retained_intron MGP_CBAJ_T0030312.1 MGP_CBAJ_G0018425.1 mouse_genomes_project 11 81425864 81444626 - MGP_CBAJ_P0030312 Srr protein_coding protein_coding MGP_CBAJ_T0099956.1 MGP_CBAJ_G0038211.1 mouse_genomes_project 11 108756772 108756876 - Gm22059 snoRNA snoRNA MGP_CBAJ_T0032829.1 MGP_CBAJ_G0019048.1 mouse_genomes_project 11 120628645 120661985 + MGP_CBAJ_P0032829 Axin2 protein_coding protein_coding MGP_CBAJ_T0032830.1 MGP_CBAJ_G0019048.1 mouse_genomes_project 11 120629096 120631687 + MGP_CBAJ_P0032830 Axin2 protein_coding protein_coding MGP_CBAJ_T0032831.1 MGP_CBAJ_G0019048.1 mouse_genomes_project 11 120629633 120631702 + MGP_CBAJ_P0032831 Axin2 protein_coding protein_coding MGP_CBAJ_T0032832.1 MGP_CBAJ_G0019048.1 mouse_genomes_project 11 120629945 120631598 + MGP_CBAJ_P0032832 Axin2 protein_coding protein_coding MGP_CBAJ_T0032833.1 MGP_CBAJ_G0019048.1 mouse_genomes_project 11 120631284 120660713 + MGP_CBAJ_P0032833 Axin2 protein_coding protein_coding MGP_CBAJ_T0032834.1 MGP_CBAJ_G0019048.1 mouse_genomes_project 11 120650163 120653846 + Axin2 protein_coding processed_transcript MGP_CBAJ_T0032835.1 MGP_CBAJ_G0019048.1 mouse_genomes_project 11 120654828 120661985 + Axin2 protein_coding processed_transcript MGP_CBAJ_T0012544.1 MGP_CBAJ_G0010656.1 mouse_genomes_project 11 93136956 93137414 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0030969.1 MGP_CBAJ_G0018590.1 mouse_genomes_project 11 91808803 91829559 - MGP_CBAJ_P0030969 Dusp14 protein_coding protein_coding MGP_CBAJ_T0030970.1 MGP_CBAJ_G0018590.1 mouse_genomes_project 11 91808803 91829115 - MGP_CBAJ_P0030970 Dusp14 protein_coding protein_coding MGP_CBAJ_T0030971.1 MGP_CBAJ_G0018590.1 mouse_genomes_project 11 91808807 91829337 - MGP_CBAJ_P0030971 Dusp14 protein_coding protein_coding MGP_CBAJ_T0030972.1 MGP_CBAJ_G0018590.1 mouse_genomes_project 11 91809176 91827838 - MGP_CBAJ_P0030972 Dusp14 protein_coding protein_coding MGP_CBAJ_T0030973.1 MGP_CBAJ_G0018590.1 mouse_genomes_project 11 91809742 91830019 - MGP_CBAJ_P0030973 Dusp14 protein_coding protein_coding MGP_CBAJ_T0028935.1 MGP_CBAJ_G0018086.1 mouse_genomes_project 11 62815117 62816132 - MGP_CBAJ_P0028935 protein_coding protein_coding MGP_CBAJ_T0099933.1 MGP_CBAJ_G0038188.1 mouse_genomes_project 11 75483355 75483498 - Gm24029 snoRNA snoRNA MGP_CBAJ_T0029639.1 MGP_CBAJ_G0018259.1 mouse_genomes_project 11 75161313 75163028 - MGP_CBAJ_P0029639 Tmem88 protein_coding protein_coding MGP_CBAJ_T0030234.1 MGP_CBAJ_G0018397.1 mouse_genomes_project 11 80137370 80281962 + MGP_CBAJ_P0030234 protein_coding protein_coding MGP_CBAJ_T0030235.1 MGP_CBAJ_G0018397.1 mouse_genomes_project 11 80137388 80281493 + MGP_CBAJ_P0030235 protein_coding protein_coding MGP_CBAJ_T0030242.1 MGP_CBAJ_G0018397.1 mouse_genomes_project 11 80281023 80281962 + MGP_CBAJ_P0030242 protein_coding protein_coding MGP_CBAJ_T0012549.1 MGP_CBAJ_G0010661.1 mouse_genomes_project 11 95430338 95430610 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011186.1 MGP_CBAJ_G0009324.1 mouse_genomes_project 11 105741254 105741334 - Gm27898 misc_RNA misc_RNA MGP_CBAJ_T0003084.1 MGP_CBAJ_G0002867.1 mouse_genomes_project 11 54434026 54435615 + Gm12569 antisense antisense MGP_CBAJ_T0003085.1 MGP_CBAJ_G0002867.1 mouse_genomes_project 11 54434686 54435470 + Gm12569 antisense antisense MGP_CBAJ_T0098678.1 MGP_CBAJ_G0036933.1 mouse_genomes_project 11 29605589 29605715 + Gm23109 snRNA snRNA MGP_CBAJ_T0016936.1 MGP_CBAJ_G0014913.1 mouse_genomes_project 11 63542151 63544492 - processed_transcript processed_transcript MGP_CBAJ_T0006272.1 MGP_CBAJ_G0005221.1 mouse_genomes_project 11 128191714 128206747 + Gm26613 lincRNA lincRNA MGP_CBAJ_T0031440.1 MGP_CBAJ_G0018700.1 mouse_genomes_project 11 104343379 104368424 + MGP_CBAJ_P0031440 Samd14 protein_coding protein_coding MGP_CBAJ_T0031441.1 MGP_CBAJ_G0018700.1 mouse_genomes_project 11 104343382 104360707 + Samd14 protein_coding processed_transcript MGP_CBAJ_T0031442.1 MGP_CBAJ_G0018700.1 mouse_genomes_project 11 104346214 104359120 + MGP_CBAJ_P0031442 Samd14 protein_coding protein_coding MGP_CBAJ_T0028177.1 MGP_CBAJ_G0017872.1 mouse_genomes_project 11 34152815 34153795 - Gm12117 protein_coding translated_processed_pseudogene MGP_CBAJ_T0028178.1 MGP_CBAJ_G0017872.1 mouse_genomes_project 11 34152936 34153392 - MGP_CBAJ_P0028178 Gm12117 protein_coding protein_coding MGP_CBAJ_T0003183.1 MGP_CBAJ_G0002947.1 mouse_genomes_project 11 96013353 96026721 - antisense antisense MGP_CBAJ_T0031750.1 MGP_CBAJ_G0018778.1 mouse_genomes_project 11 108119990 108170410 + MGP_CBAJ_P0031750 Cdk12 protein_coding protein_coding MGP_CBAJ_T0031751.1 MGP_CBAJ_G0018778.1 mouse_genomes_project 11 108120245 108163278 + MGP_CBAJ_P0031751 Cdk12 protein_coding protein_coding MGP_CBAJ_T0031752.1 MGP_CBAJ_G0018778.1 mouse_genomes_project 11 108120266 108169890 + MGP_CBAJ_P0031752 Cdk12 protein_coding protein_coding MGP_CBAJ_T0031753.1 MGP_CBAJ_G0018778.1 mouse_genomes_project 11 108137031 108142153 + Cdk12 protein_coding processed_transcript MGP_CBAJ_T0031754.1 MGP_CBAJ_G0018778.1 mouse_genomes_project 11 108158311 108202066 + Cdk12 protein_coding processed_transcript MGP_CBAJ_T0031755.1 MGP_CBAJ_G0018778.1 mouse_genomes_project 11 108186607 108191117 + Cdk12 protein_coding processed_transcript MGP_CBAJ_T0032542.1 MGP_CBAJ_G0018983.1 mouse_genomes_project 11 114302010 114350838 - MGP_CBAJ_P0032542 Plekhm1 protein_coding protein_coding MGP_CBAJ_T0032543.1 MGP_CBAJ_G0018983.1 mouse_genomes_project 11 114304344 114332393 - MGP_CBAJ_P0032543 Plekhm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012629.1 MGP_CBAJ_G0010741.1 mouse_genomes_project 11 135349510 135349937 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0028169.1 MGP_CBAJ_G0017869.1 mouse_genomes_project 11 34006990 34020940 - MGP_CBAJ_P0028169 Npm1 protein_coding protein_coding MGP_CBAJ_T0028170.1 MGP_CBAJ_G0017869.1 mouse_genomes_project 11 34008974 34021037 - MGP_CBAJ_P0028170 Npm1 protein_coding protein_coding MGP_CBAJ_T0028171.1 MGP_CBAJ_G0017869.1 mouse_genomes_project 11 34008994 34010950 - Npm1 protein_coding processed_transcript MGP_CBAJ_T0028172.1 MGP_CBAJ_G0017869.1 mouse_genomes_project 11 34011411 34021038 - MGP_CBAJ_P0028172 Npm1 protein_coding protein_coding MGP_CBAJ_T0028173.1 MGP_CBAJ_G0017869.1 mouse_genomes_project 11 34012510 34013762 - Npm1 protein_coding processed_transcript MGP_CBAJ_T0006262.1 MGP_CBAJ_G0005215.1 mouse_genomes_project 11 125264776 125419776 - 2610035D17Rik lincRNA lincRNA MGP_CBAJ_T0006263.1 MGP_CBAJ_G0005215.1 mouse_genomes_project 11 125264776 125419760 - 2610035D17Rik lincRNA lincRNA MGP_CBAJ_T0006264.1 MGP_CBAJ_G0005215.1 mouse_genomes_project 11 125264776 125391589 - 2610035D17Rik lincRNA lincRNA MGP_CBAJ_T0006265.1 MGP_CBAJ_G0005215.1 mouse_genomes_project 11 125265398 125391589 - 2610035D17Rik lincRNA lincRNA MGP_CBAJ_T0031813.1 MGP_CBAJ_G0018795.1 mouse_genomes_project 11 108745465 108749416 + MGP_CBAJ_P0031813 Csf3 protein_coding protein_coding MGP_CBAJ_T0030227.1 MGP_CBAJ_G0018393.1 mouse_genomes_project 11 79915634 79916573 - MGP_CBAJ_P0030227 Olfr385 protein_coding protein_coding MGP_CBAJ_T0031588.1 MGP_CBAJ_G0018741.1 mouse_genomes_project 11 106549643 106558524 - MGP_CBAJ_P0031588 Cdk5rap3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031589.1 MGP_CBAJ_G0018741.1 mouse_genomes_project 11 106549643 106558524 - MGP_CBAJ_P0031589 Cdk5rap3 protein_coding protein_coding MGP_CBAJ_T0031590.1 MGP_CBAJ_G0018741.1 mouse_genomes_project 11 106550034 106550973 - Cdk5rap3 protein_coding retained_intron MGP_CBAJ_T0031591.1 MGP_CBAJ_G0018741.1 mouse_genomes_project 11 106553671 106555083 - Cdk5rap3 protein_coding retained_intron MGP_CBAJ_T0031592.1 MGP_CBAJ_G0018741.1 mouse_genomes_project 11 106554168 106558420 - MGP_CBAJ_P0031592 Cdk5rap3 protein_coding protein_coding MGP_CBAJ_T0031593.1 MGP_CBAJ_G0018741.1 mouse_genomes_project 11 106554185 106558135 - MGP_CBAJ_P0031593 Cdk5rap3 protein_coding protein_coding MGP_CBAJ_T0031594.1 MGP_CBAJ_G0018741.1 mouse_genomes_project 11 106554207 106558457 - MGP_CBAJ_P0031594 Cdk5rap3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031595.1 MGP_CBAJ_G0018741.1 mouse_genomes_project 11 106554440 106558394 - MGP_CBAJ_P0031595 Cdk5rap3 protein_coding protein_coding MGP_CBAJ_T0031596.1 MGP_CBAJ_G0018741.1 mouse_genomes_project 11 106554461 106558442 - MGP_CBAJ_P0031596 Cdk5rap3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031597.1 MGP_CBAJ_G0018741.1 mouse_genomes_project 11 106554571 106558442 - MGP_CBAJ_P0031597 Cdk5rap3 protein_coding protein_coding MGP_CBAJ_T0031598.1 MGP_CBAJ_G0018741.1 mouse_genomes_project 11 106554908 106558395 - Cdk5rap3 protein_coding retained_intron MGP_CBAJ_T0006150.1 MGP_CBAJ_G0005131.1 mouse_genomes_project 11 55454990 55458240 - 9430098F02Rik lincRNA lincRNA MGP_CBAJ_T0006267.1 MGP_CBAJ_G0005217.1 mouse_genomes_project 11 126420103 126423998 + 1700025D23Rik lincRNA lincRNA MGP_CBAJ_T0012509.1 MGP_CBAJ_G0010621.1 mouse_genomes_project 11 79458855 79460818 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0029966.1 MGP_CBAJ_G0018332.1 mouse_genomes_project 11 76648179 76651042 - MGP_CBAJ_P0029966 Slc25a11 protein_coding protein_coding MGP_CBAJ_T0029967.1 MGP_CBAJ_G0018332.1 mouse_genomes_project 11 76648678 76649894 - Slc25a11 protein_coding retained_intron MGP_CBAJ_T0029968.1 MGP_CBAJ_G0018332.1 mouse_genomes_project 11 76649214 76651463 - MGP_CBAJ_P0029968 Slc25a11 protein_coding protein_coding MGP_CBAJ_T0029969.1 MGP_CBAJ_G0018332.1 mouse_genomes_project 11 76649892 76650962 - Slc25a11 protein_coding retained_intron MGP_CBAJ_T0029970.1 MGP_CBAJ_G0018332.1 mouse_genomes_project 11 76649898 76650883 - MGP_CBAJ_P0029970 Slc25a11 protein_coding protein_coding MGP_CBAJ_T0029862.1 MGP_CBAJ_G0018309.1 mouse_genomes_project 11 76139518 76143180 + MGP_CBAJ_P0029862 Slc16a11 protein_coding protein_coding MGP_CBAJ_T0029863.1 MGP_CBAJ_G0018309.1 mouse_genomes_project 11 76140676 76143179 + MGP_CBAJ_P0029863 Slc16a11 protein_coding protein_coding MGP_CBAJ_T0029864.1 MGP_CBAJ_G0018309.1 mouse_genomes_project 11 76140765 76141621 + Slc16a11 protein_coding retained_intron MGP_CBAJ_T0029865.1 MGP_CBAJ_G0018309.1 mouse_genomes_project 11 76140846 76143180 + MGP_CBAJ_P0029865 Slc16a11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029866.1 MGP_CBAJ_G0018309.1 mouse_genomes_project 11 76140881 76143181 + MGP_CBAJ_P0029866 Slc16a11 protein_coding protein_coding MGP_CBAJ_T0029867.1 MGP_CBAJ_G0018309.1 mouse_genomes_project 11 76140885 76143184 + MGP_CBAJ_P0029867 Slc16a11 protein_coding protein_coding MGP_CBAJ_T0029868.1 MGP_CBAJ_G0018309.1 mouse_genomes_project 11 76140885 76142299 + MGP_CBAJ_P0029868 Slc16a11 protein_coding protein_coding MGP_CBAJ_T0029869.1 MGP_CBAJ_G0018309.1 mouse_genomes_project 11 76140887 76141754 + MGP_CBAJ_P0029869 Slc16a11 protein_coding protein_coding MGP_CBAJ_T0029870.1 MGP_CBAJ_G0018309.1 mouse_genomes_project 11 76140888 76142442 + Slc16a11 protein_coding processed_transcript MGP_CBAJ_T0029871.1 MGP_CBAJ_G0018309.1 mouse_genomes_project 11 76141328 76142247 + Slc16a11 protein_coding retained_intron MGP_CBAJ_T0029872.1 MGP_CBAJ_G0018309.1 mouse_genomes_project 11 76141584 76143180 + Slc16a11 protein_coding retained_intron MGP_CBAJ_T0028861.1 MGP_CBAJ_G0018057.1 mouse_genomes_project 11 59338292 59354891 - MGP_CBAJ_P0028861 Atox1 protein_coding protein_coding MGP_CBAJ_T0028862.1 MGP_CBAJ_G0018057.1 mouse_genomes_project 11 59338295 59354849 - Atox1 protein_coding processed_transcript MGP_CBAJ_T0029493.1 MGP_CBAJ_G0018229.1 mouse_genomes_project 11 74152104 74154164 + MGP_CBAJ_P0029493 Mfsd6l protein_coding protein_coding MGP_CBAJ_T0032717.1 MGP_CBAJ_G0019028.1 mouse_genomes_project 11 117750346 117860560 - MGP_CBAJ_P0032717 Ern1 protein_coding protein_coding MGP_CBAJ_T0032718.1 MGP_CBAJ_G0019028.1 mouse_genomes_project 11 117753146 117860616 - Ern1 protein_coding processed_transcript MGP_CBAJ_T0032719.1 MGP_CBAJ_G0019028.1 mouse_genomes_project 11 117769466 117860600 - MGP_CBAJ_P0032719 Ern1 protein_coding protein_coding MGP_CBAJ_T0032720.1 MGP_CBAJ_G0019028.1 mouse_genomes_project 11 117795181 117860572 - MGP_CBAJ_P0032720 Ern1 protein_coding protein_coding MGP_CBAJ_T0032721.1 MGP_CBAJ_G0019028.1 mouse_genomes_project 11 117829620 117860567 - MGP_CBAJ_P0032721 Ern1 protein_coding protein_coding MGP_CBAJ_T0003210.1 MGP_CBAJ_G0002968.1 mouse_genomes_project 11 107349929 107359426 + antisense antisense MGP_CBAJ_T0031282.1 MGP_CBAJ_G0018665.1 mouse_genomes_project 11 99155246 99334851 - MGP_CBAJ_P0031282 Stxbp4 protein_coding protein_coding MGP_CBAJ_T0031283.1 MGP_CBAJ_G0018665.1 mouse_genomes_project 11 99176277 99240015 - MGP_CBAJ_P0031283 Stxbp4 protein_coding protein_coding MGP_CBAJ_T0031284.1 MGP_CBAJ_G0018665.1 mouse_genomes_project 11 99222777 99334829 - MGP_CBAJ_P0031284 Stxbp4 protein_coding protein_coding MGP_CBAJ_T0031285.1 MGP_CBAJ_G0018665.1 mouse_genomes_project 11 99293408 99334832 - MGP_CBAJ_P0031285 Stxbp4 protein_coding protein_coding MGP_CBAJ_T0031286.1 MGP_CBAJ_G0018665.1 mouse_genomes_project 11 99297088 99334843 - MGP_CBAJ_P0031286 Stxbp4 protein_coding protein_coding MGP_CBAJ_T0031287.1 MGP_CBAJ_G0018665.1 mouse_genomes_project 11 99314814 99327703 - MGP_CBAJ_P0031287 Stxbp4 protein_coding protein_coding MGP_CBAJ_T0031288.1 MGP_CBAJ_G0018665.1 mouse_genomes_project 11 99326996 99334840 - Stxbp4 protein_coding processed_transcript MGP_CBAJ_T0003252.1 MGP_CBAJ_G0003003.1 mouse_genomes_project 11 118861885 118868642 + Gm11716 antisense antisense MGP_CBAJ_T0006292.1 MGP_CBAJ_G0005238.1 mouse_genomes_project 11 134465047 134465614 - Gm11791 lincRNA lincRNA MGP_CBAJ_T0006207.1 MGP_CBAJ_G0005175.1 mouse_genomes_project 11 92337070 92347226 + Lhx1os lincRNA lincRNA MGP_CBAJ_T0006208.1 MGP_CBAJ_G0005175.1 mouse_genomes_project 11 92337079 92347226 + Lhx1os lincRNA lincRNA MGP_CBAJ_T0006209.1 MGP_CBAJ_G0005175.1 mouse_genomes_project 11 92337094 92347225 + Lhx1os lincRNA lincRNA MGP_CBAJ_T0033480.1 MGP_CBAJ_G0019182.1 mouse_genomes_project 11 131128751 131249727 - MGP_CBAJ_P0033480 Cyth1 protein_coding protein_coding MGP_CBAJ_T0033481.1 MGP_CBAJ_G0019182.1 mouse_genomes_project 11 131164090 131212421 - MGP_CBAJ_P0033481 Cyth1 protein_coding protein_coding MGP_CBAJ_T0033482.1 MGP_CBAJ_G0019182.1 mouse_genomes_project 11 131164090 131249817 - MGP_CBAJ_P0033482 Cyth1 protein_coding protein_coding MGP_CBAJ_T0033483.1 MGP_CBAJ_G0019182.1 mouse_genomes_project 11 131164099 131249785 - MGP_CBAJ_P0033483 Cyth1 protein_coding protein_coding MGP_CBAJ_T0033484.1 MGP_CBAJ_G0019182.1 mouse_genomes_project 11 131184896 131226660 - Cyth1 protein_coding processed_transcript MGP_CBAJ_T0033485.1 MGP_CBAJ_G0019182.1 mouse_genomes_project 11 131185351 131218708 - Cyth1 protein_coding processed_transcript MGP_CBAJ_T0033486.1 MGP_CBAJ_G0019182.1 mouse_genomes_project 11 131185370 131212421 - MGP_CBAJ_P0033486 Cyth1 protein_coding protein_coding MGP_CBAJ_T0030624.1 MGP_CBAJ_G0018491.1 mouse_genomes_project 11 85206564 85210983 + MGP_CBAJ_P0030624 Rab34 protein_coding protein_coding MGP_CBAJ_T0030625.1 MGP_CBAJ_G0018491.1 mouse_genomes_project 11 85207003 85211330 + MGP_CBAJ_P0030625 Rab34 protein_coding protein_coding MGP_CBAJ_T0030626.1 MGP_CBAJ_G0018491.1 mouse_genomes_project 11 85207364 85208431 + Rab34 protein_coding retained_intron MGP_CBAJ_T0030627.1 MGP_CBAJ_G0018491.1 mouse_genomes_project 11 85207461 85211297 + MGP_CBAJ_P0030627 Rab34 protein_coding protein_coding MGP_CBAJ_T0030628.1 MGP_CBAJ_G0018491.1 mouse_genomes_project 11 85207712 85210259 + Rab34 protein_coding retained_intron MGP_CBAJ_T0030629.1 MGP_CBAJ_G0018491.1 mouse_genomes_project 11 85208477 85209058 + Rab34 protein_coding retained_intron MGP_CBAJ_T0003076.1 MGP_CBAJ_G0002859.1 mouse_genomes_project 11 46924077 46927211 - Gm12158 antisense antisense MGP_CBAJ_T0029366.1 MGP_CBAJ_G0018195.1 mouse_genomes_project 11 68014487 68045624 + MGP_CBAJ_P0029366 Pmp22 protein_coding protein_coding MGP_CBAJ_T0029367.1 MGP_CBAJ_G0018195.1 mouse_genomes_project 11 68017017 68045625 + MGP_CBAJ_P0029367 Pmp22 protein_coding protein_coding MGP_CBAJ_T0029368.1 MGP_CBAJ_G0018195.1 mouse_genomes_project 11 68018074 68044562 + MGP_CBAJ_P0029368 Pmp22 protein_coding protein_coding MGP_CBAJ_T0029369.1 MGP_CBAJ_G0018195.1 mouse_genomes_project 11 68018308 68019995 + Pmp22 protein_coding processed_transcript MGP_CBAJ_T0029370.1 MGP_CBAJ_G0018195.1 mouse_genomes_project 11 68018573 68044644 + MGP_CBAJ_P0029370 Pmp22 protein_coding protein_coding MGP_CBAJ_T0016931.1 MGP_CBAJ_G0014909.1 mouse_genomes_project 11 57141037 57143655 - A430108G06Rik processed_transcript processed_transcript MGP_CBAJ_T0016932.1 MGP_CBAJ_G0014909.1 mouse_genomes_project 11 57141113 57143663 - A430108G06Rik processed_transcript processed_transcript MGP_CBAJ_T0011184.1 MGP_CBAJ_G0009322.1 mouse_genomes_project 11 97690457 97690719 - Gm24734 misc_RNA misc_RNA MGP_CBAJ_T0016921.1 MGP_CBAJ_G0014901.1 mouse_genomes_project 11 29425268 29427918 - A630052C17Rik processed_transcript processed_transcript MGP_CBAJ_T0016948.1 MGP_CBAJ_G0014919.1 mouse_genomes_project 11 73439955 73473592 + 9130017K11Rik processed_transcript processed_transcript MGP_CBAJ_T0016949.1 MGP_CBAJ_G0014919.1 mouse_genomes_project 11 73440827 73442244 + 9130017K11Rik processed_transcript processed_transcript MGP_CBAJ_T0027887.1 MGP_CBAJ_G0017805.1 mouse_genomes_project 11 21408711 21721164 - MGP_CBAJ_P0027887 Ehbp1 protein_coding protein_coding MGP_CBAJ_T0027888.1 MGP_CBAJ_G0017805.1 mouse_genomes_project 11 21408711 21720207 - MGP_CBAJ_P0027888 Ehbp1 protein_coding protein_coding MGP_CBAJ_T0027889.1 MGP_CBAJ_G0017805.1 mouse_genomes_project 11 21408713 21721164 - MGP_CBAJ_P0027889 Ehbp1 protein_coding protein_coding MGP_CBAJ_T0027890.1 MGP_CBAJ_G0017805.1 mouse_genomes_project 11 21519992 21583495 - Ehbp1 protein_coding processed_transcript MGP_CBAJ_T0027891.1 MGP_CBAJ_G0017805.1 mouse_genomes_project 11 21557046 21720241 - MGP_CBAJ_P0027891 Ehbp1 protein_coding protein_coding MGP_CBAJ_T0027892.1 MGP_CBAJ_G0017805.1 mouse_genomes_project 11 21579525 21581899 - Ehbp1 protein_coding processed_transcript MGP_CBAJ_T0027893.1 MGP_CBAJ_G0017805.1 mouse_genomes_project 11 21657217 21776076 - Ehbp1 protein_coding processed_transcript MGP_CBAJ_T0030192.1 MGP_CBAJ_G0018380.1 mouse_genomes_project 11 79455551 79461745 + MGP_CBAJ_P0030192 Tax1bp3 protein_coding protein_coding MGP_CBAJ_T0030193.1 MGP_CBAJ_G0018380.1 mouse_genomes_project 11 79455719 79460278 + Tax1bp3 protein_coding processed_transcript MGP_CBAJ_T0030194.1 MGP_CBAJ_G0018380.1 mouse_genomes_project 11 79455719 79462756 + Tax1bp3 protein_coding retained_intron MGP_CBAJ_T0030195.1 MGP_CBAJ_G0018380.1 mouse_genomes_project 11 79455738 79461640 + MGP_CBAJ_P0030195 Tax1bp3 protein_coding protein_coding MGP_CBAJ_T0009573.1 MGP_CBAJ_G0007711.1 mouse_genomes_project 11 72460453 72460525 + Mir6923 miRNA miRNA MGP_CBAJ_T0033895.1 MGP_CBAJ_G0019263.1 mouse_genomes_project 11 134621719 134645150 + MGP_CBAJ_P0033895 Narf protein_coding protein_coding MGP_CBAJ_T0033896.1 MGP_CBAJ_G0019263.1 mouse_genomes_project 11 134631174 134632085 + Narf protein_coding retained_intron MGP_CBAJ_T0033897.1 MGP_CBAJ_G0019263.1 mouse_genomes_project 11 134631656 134632448 + Narf protein_coding retained_intron MGP_CBAJ_T0012322.1 MGP_CBAJ_G0010434.1 mouse_genomes_project 11 4090511 4090799 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0028081.1 MGP_CBAJ_G0017845.1 mouse_genomes_project 11 31402381 31414350 + MGP_CBAJ_P0028081 Gpr75 protein_coding protein_coding MGP_CBAJ_T0028634.1 MGP_CBAJ_G0018001.1 mouse_genomes_project 11 54945988 55029293 - MGP_CBAJ_P0028634 Sec24a protein_coding protein_coding MGP_CBAJ_T0028635.1 MGP_CBAJ_G0018001.1 mouse_genomes_project 11 54952625 55028886 - MGP_CBAJ_P0028635 Sec24a protein_coding protein_coding MGP_CBAJ_T0028636.1 MGP_CBAJ_G0018001.1 mouse_genomes_project 11 54989096 55029113 - MGP_CBAJ_P0028636 Sec24a protein_coding protein_coding MGP_CBAJ_T0028637.1 MGP_CBAJ_G0018001.1 mouse_genomes_project 11 54989096 55029106 - MGP_CBAJ_P0028637 Sec24a protein_coding protein_coding MGP_CBAJ_T0028638.1 MGP_CBAJ_G0018001.1 mouse_genomes_project 11 54996468 55029836 - Sec24a protein_coding retained_intron MGP_CBAJ_T0028639.1 MGP_CBAJ_G0018001.1 mouse_genomes_project 11 55010834 55039396 - Sec24a protein_coding retained_intron MGP_CBAJ_T0028328.1 MGP_CBAJ_G0017911.1 mouse_genomes_project 11 48220811 48287024 + MGP_CBAJ_P0028328 Clint1 protein_coding protein_coding MGP_CBAJ_T0028329.1 MGP_CBAJ_G0017911.1 mouse_genomes_project 11 48220811 48287024 + MGP_CBAJ_P0028329 Clint1 protein_coding protein_coding MGP_CBAJ_T0028330.1 MGP_CBAJ_G0017911.1 mouse_genomes_project 11 48259696 48287024 + Clint1 protein_coding processed_transcript MGP_CBAJ_T0012380.1 MGP_CBAJ_G0010492.1 mouse_genomes_project 11 24240202 24241727 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012439.1 MGP_CBAJ_G0010551.1 mouse_genomes_project 11 52282387 52283299 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0031172.1 MGP_CBAJ_G0018634.1 mouse_genomes_project 11 95858180 95936606 + Rnf43 protein_coding retained_intron MGP_CBAJ_T0031173.1 MGP_CBAJ_G0018634.1 mouse_genomes_project 11 95858545 95924989 + Rnf43 protein_coding processed_transcript MGP_CBAJ_T0031174.1 MGP_CBAJ_G0018634.1 mouse_genomes_project 11 95860007 95941212 + MGP_CBAJ_P0031174 Rnf43 protein_coding protein_coding MGP_CBAJ_T0031175.1 MGP_CBAJ_G0018634.1 mouse_genomes_project 11 95860074 95940871 + MGP_CBAJ_P0031175 Rnf43 protein_coding protein_coding MGP_CBAJ_T0031176.1 MGP_CBAJ_G0018634.1 mouse_genomes_project 11 95934046 95937198 + Rnf43 protein_coding retained_intron MGP_CBAJ_T0031177.1 MGP_CBAJ_G0018634.1 mouse_genomes_project 11 95936045 95937785 + Rnf43 protein_coding retained_intron MGP_CBAJ_T0031178.1 MGP_CBAJ_G0018634.1 mouse_genomes_project 11 95940591 95941140 + Rnf43 protein_coding processed_transcript MGP_CBAJ_T0028675.1 MGP_CBAJ_G0018010.1 mouse_genomes_project 11 55758214 55789467 + MGP_CBAJ_P0028675 Vdac1 protein_coding protein_coding MGP_CBAJ_T0028676.1 MGP_CBAJ_G0018010.1 mouse_genomes_project 11 55758489 55788566 + MGP_CBAJ_P0028676 Vdac1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0028677.1 MGP_CBAJ_G0018010.1 mouse_genomes_project 11 55774164 55776840 + Vdac1 protein_coding processed_transcript MGP_CBAJ_T0028678.1 MGP_CBAJ_G0018010.1 mouse_genomes_project 11 55774327 55788593 + MGP_CBAJ_P0028678 Vdac1 protein_coding protein_coding MGP_CBAJ_T0028679.1 MGP_CBAJ_G0018010.1 mouse_genomes_project 11 55787266 55788861 + Vdac1 protein_coding retained_intron MGP_CBAJ_T0027595.1 MGP_CBAJ_G0017734.1 mouse_genomes_project 11 3205232 3236008 - MGP_CBAJ_P0027595 Urgcp protein_coding protein_coding MGP_CBAJ_T0027596.1 MGP_CBAJ_G0017734.1 mouse_genomes_project 11 3207584 3236044 - MGP_CBAJ_P0027596 Urgcp protein_coding protein_coding MGP_CBAJ_T0003187.1 MGP_CBAJ_G0002951.1 mouse_genomes_project 11 97403397 97442171 + Scpep1os antisense antisense MGP_CBAJ_T0003248.1 MGP_CBAJ_G0003000.1 mouse_genomes_project 11 118494817 118495044 + antisense antisense MGP_CBAJ_T0031854.1 MGP_CBAJ_G0018803.1 mouse_genomes_project 11 109005189 109024739 + MGP_CBAJ_P0031854 Cdc6 protein_coding protein_coding MGP_CBAJ_T0031855.1 MGP_CBAJ_G0018803.1 mouse_genomes_project 11 109005237 109024743 + MGP_CBAJ_P0031855 Cdc6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031856.1 MGP_CBAJ_G0018803.1 mouse_genomes_project 11 109005539 109019290 + MGP_CBAJ_P0031856 Cdc6 protein_coding protein_coding MGP_CBAJ_T0031857.1 MGP_CBAJ_G0018803.1 mouse_genomes_project 11 109017862 109018858 + Cdc6 protein_coding retained_intron MGP_CBAJ_T0028305.1 MGP_CBAJ_G0017906.1 mouse_genomes_project 11 45891447 45961996 - MGP_CBAJ_P0028305 Adra1b protein_coding protein_coding MGP_CBAJ_T0028306.1 MGP_CBAJ_G0017906.1 mouse_genomes_project 11 45891447 46037009 - MGP_CBAJ_P0028306 Adra1b protein_coding protein_coding MGP_CBAJ_T0028307.1 MGP_CBAJ_G0017906.1 mouse_genomes_project 11 45892864 46037009 - MGP_CBAJ_P0028307 Adra1b protein_coding protein_coding MGP_CBAJ_T0016897.1 MGP_CBAJ_G0014890.1 mouse_genomes_project 11 4182771 4189738 - processed_transcript processed_transcript MGP_CBAJ_T0016898.1 MGP_CBAJ_G0014890.1 mouse_genomes_project 11 4182772 4183911 - processed_transcript processed_transcript MGP_CBAJ_T0016899.1 MGP_CBAJ_G0014890.1 mouse_genomes_project 11 4182805 4189419 - processed_transcript processed_transcript MGP_CBAJ_T0016900.1 MGP_CBAJ_G0014890.1 mouse_genomes_project 11 4188876 4189724 - processed_transcript processed_transcript MGP_CBAJ_T0003251.1 MGP_CBAJ_G0003002.1 mouse_genomes_project 11 118657737 118670221 + Gm11715 antisense antisense MGP_CBAJ_T0028151.1 MGP_CBAJ_G0017861.1 mouse_genomes_project 11 32994594 32995905 + MGP_CBAJ_P0028151 protein_coding protein_coding MGP_CBAJ_T0028152.1 MGP_CBAJ_G0017861.1 mouse_genomes_project 11 32994630 32995962 + protein_coding retained_intron MGP_CBAJ_T0099897.1 MGP_CBAJ_G0038152.1 mouse_genomes_project 11 3024216 3024346 - Gm22471 snoRNA snoRNA MGP_CBAJ_T0030247.1 MGP_CBAJ_G0018406.1 mouse_genomes_project 11 80429715 80441911 - MGP_CBAJ_P0030247 Olfr139 protein_coding protein_coding MGP_CBAJ_T0030248.1 MGP_CBAJ_G0018406.1 mouse_genomes_project 11 80429715 80430663 - MGP_CBAJ_P0030248 Olfr139 protein_coding protein_coding MGP_CBAJ_T0030249.1 MGP_CBAJ_G0018406.1 mouse_genomes_project 11 80435796 80439393 - Olfr139 protein_coding processed_transcript MGP_CBAJ_T0016929.1 MGP_CBAJ_G0014907.1 mouse_genomes_project 11 51580637 51590482 - Gm16170 processed_transcript processed_transcript MGP_CBAJ_T0012399.1 MGP_CBAJ_G0010511.1 mouse_genomes_project 11 31005974 31006470 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0030187.1 MGP_CBAJ_G0018378.1 mouse_genomes_project 11 79438906 79451154 + MGP_CBAJ_P0030187 P2rx5 protein_coding protein_coding MGP_CBAJ_T0030188.1 MGP_CBAJ_G0018378.1 mouse_genomes_project 11 79439070 79448967 + MGP_CBAJ_P0030188 P2rx5 protein_coding protein_coding MGP_CBAJ_T0030189.1 MGP_CBAJ_G0018378.1 mouse_genomes_project 11 79439070 79448967 + MGP_CBAJ_P0030189 P2rx5 protein_coding protein_coding MGP_CBAJ_T0009633.1 MGP_CBAJ_G0007771.1 mouse_genomes_project 11 113445422 113445531 - Gm22920 miRNA miRNA MGP_CBAJ_T0012600.1 MGP_CBAJ_G0010712.1 mouse_genomes_project 11 120077273 120077757 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0032837.1 MGP_CBAJ_G0019050.1 mouse_genomes_project 11 120974558 121059276 - MGP_CBAJ_P0032837 Rgs9 protein_coding protein_coding MGP_CBAJ_T0032838.1 MGP_CBAJ_G0019050.1 mouse_genomes_project 11 120974564 120998594 - MGP_CBAJ_P0032838 Rgs9 protein_coding protein_coding MGP_CBAJ_T0032839.1 MGP_CBAJ_G0019050.1 mouse_genomes_project 11 120984260 121059213 - MGP_CBAJ_P0032839 Rgs9 protein_coding protein_coding MGP_CBAJ_T0032840.1 MGP_CBAJ_G0019050.1 mouse_genomes_project 11 120987977 120995408 - Rgs9 protein_coding processed_transcript MGP_CBAJ_T0032841.1 MGP_CBAJ_G0019050.1 mouse_genomes_project 11 121012176 121059253 - MGP_CBAJ_P0032841 Rgs9 protein_coding protein_coding MGP_CBAJ_T0032842.1 MGP_CBAJ_G0019050.1 mouse_genomes_project 11 121014829 121059141 - MGP_CBAJ_P0032842 Rgs9 protein_coding unknown_likely_coding MGP_CBAJ_T0098260.1 MGP_CBAJ_G0036532.1 mouse_genomes_project 11 73834132 73835454 - Gm12305 sense_intronic sense_intronic MGP_CBAJ_T0098735.1 MGP_CBAJ_G0036990.1 mouse_genomes_project 11 120793220 120793327 - Gm24149 snRNA snRNA MGP_CBAJ_T0003120.1 MGP_CBAJ_G0002897.1 mouse_genomes_project 11 67291050 67310634 + Gm12278 antisense antisense MGP_CBAJ_T0003154.1 MGP_CBAJ_G0002924.1 mouse_genomes_project 11 81514256 81514978 - Gm28180 antisense antisense MGP_CBAJ_T0016963.1 MGP_CBAJ_G0014928.1 mouse_genomes_project 11 90489862 90497226 - Unc45bos processed_transcript processed_transcript MGP_CBAJ_T0029818.1 MGP_CBAJ_G0018301.1 mouse_genomes_project 11 75871827 75875979 + MGP_CBAJ_P0029818 Phf23 protein_coding protein_coding MGP_CBAJ_T0029819.1 MGP_CBAJ_G0018301.1 mouse_genomes_project 11 75871848 75875982 + MGP_CBAJ_P0029819 Phf23 protein_coding protein_coding MGP_CBAJ_T0029820.1 MGP_CBAJ_G0018301.1 mouse_genomes_project 11 75871966 75874349 + Phf23 protein_coding retained_intron MGP_CBAJ_T0029821.1 MGP_CBAJ_G0018301.1 mouse_genomes_project 11 75872703 75874724 + MGP_CBAJ_P0029821 Phf23 protein_coding protein_coding MGP_CBAJ_T0029822.1 MGP_CBAJ_G0018301.1 mouse_genomes_project 11 75872913 75874469 + Phf23 protein_coding processed_transcript MGP_CBAJ_T0029823.1 MGP_CBAJ_G0018301.1 mouse_genomes_project 11 75872929 75874370 + Phf23 protein_coding processed_transcript MGP_CBAJ_T0028292.1 MGP_CBAJ_G0017901.1 mouse_genomes_project 11 45598679 45675612 + MGP_CBAJ_P0028292 Ccnjl protein_coding protein_coding MGP_CBAJ_T0028293.1 MGP_CBAJ_G0017901.1 mouse_genomes_project 11 45599141 45636690 + Ccnjl protein_coding processed_transcript MGP_CBAJ_T0033352.1 MGP_CBAJ_G0019154.1 mouse_genomes_project 11 129398978 129411465 - MGP_CBAJ_P0033352 Cygb protein_coding protein_coding MGP_CBAJ_T0030375.1 MGP_CBAJ_G0018441.1 mouse_genomes_project 11 82205797 82249337 + MGP_CBAJ_P0030375 Pitpna protein_coding protein_coding MGP_CBAJ_T0030376.1 MGP_CBAJ_G0018441.1 mouse_genomes_project 11 82205808 82249311 + MGP_CBAJ_P0030376 Pitpna protein_coding protein_coding MGP_CBAJ_T0030377.1 MGP_CBAJ_G0018441.1 mouse_genomes_project 11 82205819 82247263 + MGP_CBAJ_P0030377 Pitpna protein_coding protein_coding MGP_CBAJ_T0030378.1 MGP_CBAJ_G0018441.1 mouse_genomes_project 11 82205859 82216295 + Pitpna protein_coding retained_intron MGP_CBAJ_T0030379.1 MGP_CBAJ_G0018441.1 mouse_genomes_project 11 82205859 82246851 + MGP_CBAJ_P0030379 Pitpna protein_coding nonsense_mediated_decay MGP_CBAJ_T0030380.1 MGP_CBAJ_G0018441.1 mouse_genomes_project 11 82240972 82246724 + Pitpna protein_coding processed_transcript MGP_CBAJ_T0031398.1 MGP_CBAJ_G0018686.1 mouse_genomes_project 11 103783171 103792560 - Rsad1 protein_coding processed_transcript MGP_CBAJ_T0031399.1 MGP_CBAJ_G0018686.1 mouse_genomes_project 11 103783171 103792504 - MGP_CBAJ_P0031399 Rsad1 protein_coding protein_coding MGP_CBAJ_T0031400.1 MGP_CBAJ_G0018686.1 mouse_genomes_project 11 103787908 103792100 - Rsad1 protein_coding processed_transcript MGP_CBAJ_T0031401.1 MGP_CBAJ_G0018686.1 mouse_genomes_project 11 103787973 103791910 - Rsad1 protein_coding processed_transcript MGP_CBAJ_T0032913.1 MGP_CBAJ_G0019067.1 mouse_genomes_project 11 123028900 123041861 + MGP_CBAJ_P0032913 Kcnj2 protein_coding protein_coding MGP_CBAJ_T0011671.1 MGP_CBAJ_G0009806.1 mouse_genomes_project 11 80078338 80079401 - MGP_CBAJ_P0011671 Olfr388-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0012353.1 MGP_CBAJ_G0010465.1 mouse_genomes_project 11 17216852 17218807 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006123.1 MGP_CBAJ_G0005105.1 mouse_genomes_project 11 32754782 32760737 - Gm12108 lincRNA lincRNA MGP_CBAJ_T0031654.1 MGP_CBAJ_G0018756.1 mouse_genomes_project 11 107118530 107162496 + MGP_CBAJ_P0031654 Socs7 protein_coding protein_coding MGP_CBAJ_T0031655.1 MGP_CBAJ_G0018756.1 mouse_genomes_project 11 107138956 107140187 + Socs7 protein_coding processed_transcript MGP_CBAJ_T0016902.1 MGP_CBAJ_G0014892.1 mouse_genomes_project 11 9904862 9952863 - Gm11999 processed_transcript processed_transcript MGP_CBAJ_T0009570.1 MGP_CBAJ_G0007708.1 mouse_genomes_project 11 69657443 69657589 - Gm24275 miRNA miRNA MGP_CBAJ_T0027937.1 MGP_CBAJ_G0017816.1 mouse_genomes_project 11 23091209 23100199 - MGP_CBAJ_P0027937 Ahsa2 protein_coding protein_coding MGP_CBAJ_T0027938.1 MGP_CBAJ_G0017816.1 mouse_genomes_project 11 23092243 23094967 - Ahsa2 protein_coding processed_transcript MGP_CBAJ_T0027939.1 MGP_CBAJ_G0017816.1 mouse_genomes_project 11 23092981 23094085 - Ahsa2 protein_coding processed_transcript MGP_CBAJ_T0027940.1 MGP_CBAJ_G0017816.1 mouse_genomes_project 11 23093058 23100515 - MGP_CBAJ_P0027940 Ahsa2 protein_coding protein_coding MGP_CBAJ_T0027941.1 MGP_CBAJ_G0017816.1 mouse_genomes_project 11 23093087 23093738 - Ahsa2 protein_coding processed_transcript MGP_CBAJ_T0027942.1 MGP_CBAJ_G0017816.1 mouse_genomes_project 11 23093769 23100566 - MGP_CBAJ_P0027942 Ahsa2 protein_coding protein_coding MGP_CBAJ_T0027943.1 MGP_CBAJ_G0017816.1 mouse_genomes_project 11 23095814 23100556 - MGP_CBAJ_P0027943 Ahsa2 protein_coding protein_coding MGP_CBAJ_T0011171.1 MGP_CBAJ_G0009309.1 mouse_genomes_project 11 20473479 20473748 - Gm22600 misc_RNA misc_RNA MGP_CBAJ_T0099914.1 MGP_CBAJ_G0038169.1 mouse_genomes_project 11 27297476 27297608 - Gm25387 snoRNA snoRNA MGP_CBAJ_T0099898.1 MGP_CBAJ_G0038153.1 mouse_genomes_project 11 4189010 4189143 - Snora9 snoRNA snoRNA MGP_CBAJ_T0099931.1 MGP_CBAJ_G0038186.1 mouse_genomes_project 11 67621487 67621630 + Gm24151 snoRNA snoRNA MGP_CBAJ_T0006170.1 MGP_CBAJ_G0005149.1 mouse_genomes_project 11 72298341 72310740 + lincRNA lincRNA MGP_CBAJ_T0006171.1 MGP_CBAJ_G0005149.1 mouse_genomes_project 11 72299582 72311243 + lincRNA lincRNA MGP_CBAJ_T0028102.1 MGP_CBAJ_G0017851.1 mouse_genomes_project 11 32485438 32557054 + MGP_CBAJ_P0028102 Cpeb4 protein_coding protein_coding MGP_CBAJ_T0028103.1 MGP_CBAJ_G0017851.1 mouse_genomes_project 11 32485453 32562613 + MGP_CBAJ_P0028103 Cpeb4 protein_coding protein_coding MGP_CBAJ_T0028104.1 MGP_CBAJ_G0017851.1 mouse_genomes_project 11 32486503 32562613 + MGP_CBAJ_P0028104 Cpeb4 protein_coding protein_coding MGP_CBAJ_T0028368.1 MGP_CBAJ_G0017924.1 mouse_genomes_project 11 49033166 49050342 + MGP_CBAJ_P0028368 BC053393 protein_coding protein_coding MGP_CBAJ_T0033728.1 MGP_CBAJ_G0019232.1 mouse_genomes_project 11 133888549 133894794 - MGP_CBAJ_P0033728 Alyref protein_coding protein_coding MGP_CBAJ_T0033729.1 MGP_CBAJ_G0019232.1 mouse_genomes_project 11 133890937 133892086 - Alyref protein_coding processed_transcript MGP_CBAJ_T0033730.1 MGP_CBAJ_G0019232.1 mouse_genomes_project 11 133892044 133894660 - Alyref protein_coding retained_intron MGP_CBAJ_T0033242.1 MGP_CBAJ_G0019135.1 mouse_genomes_project 11 128766517 128769993 - Trim47 protein_coding processed_transcript MGP_CBAJ_T0033243.1 MGP_CBAJ_G0019135.1 mouse_genomes_project 11 128766517 128772099 - MGP_CBAJ_P0033243 Trim47 protein_coding protein_coding MGP_CBAJ_T0033244.1 MGP_CBAJ_G0019135.1 mouse_genomes_project 11 128766517 128772108 - MGP_CBAJ_P0033244 Trim47 protein_coding protein_coding MGP_CBAJ_T0033245.1 MGP_CBAJ_G0019135.1 mouse_genomes_project 11 128766974 128768957 - Trim47 protein_coding processed_transcript MGP_CBAJ_T0033246.1 MGP_CBAJ_G0019135.1 mouse_genomes_project 11 128767104 128769614 - Trim47 protein_coding processed_transcript MGP_CBAJ_T0033247.1 MGP_CBAJ_G0019135.1 mouse_genomes_project 11 128767157 128769909 - Trim47 protein_coding processed_transcript MGP_CBAJ_T0033248.1 MGP_CBAJ_G0019135.1 mouse_genomes_project 11 128769684 128789364 - Trim47 protein_coding processed_transcript MGP_CBAJ_T0033681.1 MGP_CBAJ_G0019221.1 mouse_genomes_project 11 133739115 133740578 - MGP_CBAJ_P0033681 Oxld1 protein_coding protein_coding MGP_CBAJ_T0033682.1 MGP_CBAJ_G0019221.1 mouse_genomes_project 11 133739394 133740446 - MGP_CBAJ_P0033682 Oxld1 protein_coding protein_coding MGP_CBAJ_T0028424.1 MGP_CBAJ_G0017945.1 mouse_genomes_project 11 51987530 51988469 + MGP_CBAJ_P0028424 Olfr1394 protein_coding protein_coding MGP_CBAJ_T0028215.1 MGP_CBAJ_G0017884.1 mouse_genomes_project 11 36934001 36935504 - MGP_CBAJ_P0028215 Fbll1 protein_coding protein_coding MGP_CBAJ_T0029927.1 MGP_CBAJ_G0018323.1 mouse_genomes_project 11 76471894 76477829 + MGP_CBAJ_P0029927 Tm4sf5 protein_coding protein_coding MGP_CBAJ_T0029928.1 MGP_CBAJ_G0018323.1 mouse_genomes_project 11 76476620 76477533 + Tm4sf5 protein_coding processed_transcript MGP_CBAJ_T0029929.1 MGP_CBAJ_G0018323.1 mouse_genomes_project 11 76476856 76477618 + Tm4sf5 protein_coding retained_intron MGP_CBAJ_T0030423.1 MGP_CBAJ_G0018451.1 mouse_genomes_project 11 82811312 82973489 - Glod4 protein_coding retained_intron MGP_CBAJ_T0030436.1 MGP_CBAJ_G0018451.1 mouse_genomes_project 11 82936033 82973477 - MGP_CBAJ_P0030436 Glod4 protein_coding protein_coding MGP_CBAJ_T0030439.1 MGP_CBAJ_G0018451.1 mouse_genomes_project 11 82948660 82973539 - MGP_CBAJ_P0030439 Glod4 protein_coding protein_coding MGP_CBAJ_T0030440.1 MGP_CBAJ_G0018451.1 mouse_genomes_project 11 82948757 82973465 - MGP_CBAJ_P0030440 Glod4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030441.1 MGP_CBAJ_G0018451.1 mouse_genomes_project 11 82948944 82973273 - MGP_CBAJ_P0030441 Glod4 protein_coding protein_coding MGP_CBAJ_T0030442.1 MGP_CBAJ_G0018451.1 mouse_genomes_project 11 82962727 82973424 - MGP_CBAJ_P0030442 Glod4 protein_coding protein_coding MGP_CBAJ_T0030443.1 MGP_CBAJ_G0018451.1 mouse_genomes_project 11 82963744 82969352 - Glod4 protein_coding retained_intron MGP_CBAJ_T0030444.1 MGP_CBAJ_G0018451.1 mouse_genomes_project 11 82964016 82973483 - MGP_CBAJ_P0030444 Glod4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030445.1 MGP_CBAJ_G0018451.1 mouse_genomes_project 11 82967301 82973452 - MGP_CBAJ_P0030445 Glod4 protein_coding protein_coding MGP_CBAJ_T0099945.1 MGP_CBAJ_G0038200.1 mouse_genomes_project 11 85196851 85196922 - Snord4a snoRNA snoRNA MGP_CBAJ_T0031987.1 MGP_CBAJ_G0018875.1 mouse_genomes_project 11 110812402 110831075 - MGP_CBAJ_P0031987 Nt5c3b protein_coding protein_coding MGP_CBAJ_T0031988.1 MGP_CBAJ_G0018875.1 mouse_genomes_project 11 110812402 110834762 - MGP_CBAJ_P0031988 Nt5c3b protein_coding protein_coding MGP_CBAJ_T0031990.1 MGP_CBAJ_G0018875.1 mouse_genomes_project 11 110819466 110831041 - MGP_CBAJ_P0031990 Nt5c3b protein_coding protein_coding MGP_CBAJ_T0031991.1 MGP_CBAJ_G0018875.1 mouse_genomes_project 11 110819969 110821598 - Nt5c3b protein_coding processed_transcript MGP_CBAJ_T0031992.1 MGP_CBAJ_G0018875.1 mouse_genomes_project 11 110822941 110830902 - Nt5c3b protein_coding processed_transcript MGP_CBAJ_T0031993.1 MGP_CBAJ_G0018875.1 mouse_genomes_project 11 110822978 110831059 - Nt5c3b protein_coding processed_transcript MGP_CBAJ_T0031994.1 MGP_CBAJ_G0018875.1 mouse_genomes_project 11 110823728 110831002 - Nt5c3b protein_coding processed_transcript MGP_CBAJ_T0031995.1 MGP_CBAJ_G0018875.1 mouse_genomes_project 11 110828277 110830915 - Nt5c3b protein_coding processed_transcript MGP_CBAJ_T0031996.1 MGP_CBAJ_G0018875.1 mouse_genomes_project 11 110829538 110830913 - Nt5c3b protein_coding processed_transcript MGP_CBAJ_T0012334.1 MGP_CBAJ_G0010446.1 mouse_genomes_project 11 8345664 8346579 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0033203.1 MGP_CBAJ_G0019128.1 mouse_genomes_project 11 128564239 128600556 + MGP_CBAJ_P0033203 Sap30bp protein_coding protein_coding MGP_CBAJ_T0033204.1 MGP_CBAJ_G0019128.1 mouse_genomes_project 11 128564530 128588338 + Sap30bp protein_coding processed_transcript MGP_CBAJ_T0033205.1 MGP_CBAJ_G0019128.1 mouse_genomes_project 11 128564594 128569367 + Sap30bp protein_coding processed_transcript MGP_CBAJ_T0033206.1 MGP_CBAJ_G0019128.1 mouse_genomes_project 11 128564631 128599366 + Sap30bp protein_coding processed_transcript MGP_CBAJ_T0033207.1 MGP_CBAJ_G0019128.1 mouse_genomes_project 11 128564633 128598261 + MGP_CBAJ_P0033207 Sap30bp protein_coding unknown_likely_coding MGP_CBAJ_T0031972.1 MGP_CBAJ_G0018872.1 mouse_genomes_project 11 110753464 110757224 - Jup protein_coding processed_transcript MGP_CBAJ_T0031973.1 MGP_CBAJ_G0018872.1 mouse_genomes_project 11 110755125 110784796 - MGP_CBAJ_P0031973 Jup protein_coding protein_coding MGP_CBAJ_T0031974.1 MGP_CBAJ_G0018872.1 mouse_genomes_project 11 110755565 110758633 - Jup protein_coding processed_transcript MGP_CBAJ_T0031975.1 MGP_CBAJ_G0018872.1 mouse_genomes_project 11 110756803 110784796 - MGP_CBAJ_P0031975 Jup protein_coding protein_coding MGP_CBAJ_T0031976.1 MGP_CBAJ_G0018872.1 mouse_genomes_project 11 110756864 110757816 - Jup protein_coding processed_transcript MGP_CBAJ_T0031977.1 MGP_CBAJ_G0018872.1 mouse_genomes_project 11 110768289 110770091 - Jup protein_coding processed_transcript MGP_CBAJ_T0031978.1 MGP_CBAJ_G0018872.1 mouse_genomes_project 11 110770313 110784810 - Jup protein_coding processed_transcript MGP_CBAJ_T0031979.1 MGP_CBAJ_G0018872.1 mouse_genomes_project 11 110770393 110773740 - Jup protein_coding processed_transcript MGP_CBAJ_T0031980.1 MGP_CBAJ_G0018872.1 mouse_genomes_project 11 110770402 110773769 - Jup protein_coding processed_transcript MGP_CBAJ_T0028561.1 MGP_CBAJ_G0017980.1 mouse_genomes_project 11 53904991 53906745 + Grm6 protein_coding processed_transcript MGP_CBAJ_T0028562.1 MGP_CBAJ_G0017980.1 mouse_genomes_project 11 53904991 53922881 + MGP_CBAJ_P0028562 Grm6 protein_coding protein_coding MGP_CBAJ_T0028563.1 MGP_CBAJ_G0017980.1 mouse_genomes_project 11 53905292 53922852 + MGP_CBAJ_P0028563 Grm6 protein_coding protein_coding MGP_CBAJ_T0028564.1 MGP_CBAJ_G0017980.1 mouse_genomes_project 11 53913671 53922883 + Grm6 protein_coding processed_transcript MGP_CBAJ_T0012472.1 MGP_CBAJ_G0010584.1 mouse_genomes_project 11 63873557 63873862 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0032431.1 MGP_CBAJ_G0018960.1 mouse_genomes_project 11 113385614 113389277 + MGP_CBAJ_P0032431 Fzd2 protein_coding protein_coding MGP_CBAJ_T0003057.1 MGP_CBAJ_G0002842.1 mouse_genomes_project 11 17922500 17924550 + Gm16140 antisense antisense MGP_CBAJ_T0003058.1 MGP_CBAJ_G0002842.1 mouse_genomes_project 11 17922502 17924162 + Gm16140 antisense antisense MGP_CBAJ_T0031953.1 MGP_CBAJ_G0018863.1 mouse_genomes_project 11 110492051 110497341 - MGP_CBAJ_P0031953 Krt19 protein_coding protein_coding MGP_CBAJ_T0031954.1 MGP_CBAJ_G0018863.1 mouse_genomes_project 11 110492148 110494931 - Krt19 protein_coding processed_transcript MGP_CBAJ_T0031955.1 MGP_CBAJ_G0018863.1 mouse_genomes_project 11 110493361 110499882 - Krt19 protein_coding processed_transcript MGP_CBAJ_T0003269.1 MGP_CBAJ_G0003016.1 mouse_genomes_project 11 127920088 127921817 - Ict1os antisense antisense MGP_CBAJ_T0031983.1 MGP_CBAJ_G0018874.1 mouse_genomes_project 11 110805798 110814906 + MGP_CBAJ_P0031983 Fkbp10 protein_coding protein_coding MGP_CBAJ_T0031984.1 MGP_CBAJ_G0018874.1 mouse_genomes_project 11 110805867 110814194 + MGP_CBAJ_P0031984 Fkbp10 protein_coding protein_coding MGP_CBAJ_T0031985.1 MGP_CBAJ_G0018874.1 mouse_genomes_project 11 110805946 110812171 + MGP_CBAJ_P0031985 Fkbp10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031986.1 MGP_CBAJ_G0018874.1 mouse_genomes_project 11 110810505 110811778 + Fkbp10 protein_coding retained_intron MGP_CBAJ_T0031989.1 MGP_CBAJ_G0018874.1 mouse_genomes_project 11 110813119 110814382 + Fkbp10 protein_coding retained_intron MGP_CBAJ_T0027621.1 MGP_CBAJ_G0017742.1 mouse_genomes_project 11 3513399 3525485 + MGP_CBAJ_P0027621 Ykt6 protein_coding protein_coding MGP_CBAJ_T0027622.1 MGP_CBAJ_G0017742.1 mouse_genomes_project 11 3517010 3520908 + Ykt6 protein_coding processed_transcript MGP_CBAJ_T0030621.1 MGP_CBAJ_G0018490.1 mouse_genomes_project 11 85196097 85198243 - Rpl23a protein_coding retained_intron MGP_CBAJ_T0030622.1 MGP_CBAJ_G0018490.1 mouse_genomes_project 11 85196100 85196796 - Rpl23a protein_coding retained_intron MGP_CBAJ_T0030623.1 MGP_CBAJ_G0018490.1 mouse_genomes_project 11 85196100 85198750 - MGP_CBAJ_P0030623 Rpl23a protein_coding protein_coding MGP_CBAJ_T0028929.1 MGP_CBAJ_G0018081.1 mouse_genomes_project 11 62705882 62712641 - MGP_CBAJ_P0028929 4930504O13Rik protein_coding protein_coding MGP_CBAJ_T0033731.1 MGP_CBAJ_G0019233.1 mouse_genomes_project 11 133894849 133907491 + MGP_CBAJ_P0033731 Anapc11 protein_coding protein_coding MGP_CBAJ_T0033732.1 MGP_CBAJ_G0019233.1 mouse_genomes_project 11 133894868 133897117 + Anapc11 protein_coding retained_intron MGP_CBAJ_T0033733.1 MGP_CBAJ_G0019233.1 mouse_genomes_project 11 133894960 133905069 + MGP_CBAJ_P0033733 Anapc11 protein_coding protein_coding MGP_CBAJ_T0033734.1 MGP_CBAJ_G0019233.1 mouse_genomes_project 11 133903236 133904785 + Anapc11 protein_coding processed_transcript MGP_CBAJ_T0028972.1 MGP_CBAJ_G0018110.1 mouse_genomes_project 11 63251238 63251853 + MGP_CBAJ_P0028972 Hist3h2ba protein_coding protein_coding MGP_CBAJ_T0029364.1 MGP_CBAJ_G0018193.1 mouse_genomes_project 11 67812539 67854032 + MGP_CBAJ_P0029364 Cdrt4 protein_coding protein_coding MGP_CBAJ_T0009548.1 MGP_CBAJ_G0007686.1 mouse_genomes_project 11 36919187 36919273 + Mir103-1 miRNA miRNA MGP_CBAJ_T0032300.1 MGP_CBAJ_G0018941.1 mouse_genomes_project 11 112801909 112803056 - MGP_CBAJ_P0032300 Pyy protein_coding protein_coding MGP_CBAJ_T0032301.1 MGP_CBAJ_G0018941.1 mouse_genomes_project 11 112801909 112803066 - MGP_CBAJ_P0032301 Pyy protein_coding protein_coding MGP_CBAJ_T0032302.1 MGP_CBAJ_G0018941.1 mouse_genomes_project 11 112801913 112802650 - MGP_CBAJ_P0032302 Pyy protein_coding protein_coding MGP_CBAJ_T0032303.1 MGP_CBAJ_G0018941.1 mouse_genomes_project 11 112802194 112803066 - Pyy protein_coding retained_intron MGP_CBAJ_T0012398.1 MGP_CBAJ_G0010510.1 mouse_genomes_project 11 30963498 30964439 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0029756.1 MGP_CBAJ_G0018290.1 mouse_genomes_project 11 75726527 75729677 - MGP_CBAJ_P0029756 Kctd11 protein_coding protein_coding MGP_CBAJ_T0028308.1 MGP_CBAJ_G0017907.1 mouse_genomes_project 11 46619213 46633130 + MGP_CBAJ_P0028308 Il12b protein_coding protein_coding MGP_CBAJ_T0028309.1 MGP_CBAJ_G0017907.1 mouse_genomes_project 11 46619213 46633154 + MGP_CBAJ_P0028309 Il12b protein_coding protein_coding MGP_CBAJ_T0033208.1 MGP_CBAJ_G0019129.1 mouse_genomes_project 11 128611279 128649187 + MGP_CBAJ_P0033208 Itgb4 protein_coding protein_coding MGP_CBAJ_T0033209.1 MGP_CBAJ_G0019129.1 mouse_genomes_project 11 128611295 128649186 + MGP_CBAJ_P0033209 Itgb4 protein_coding protein_coding MGP_CBAJ_T0033210.1 MGP_CBAJ_G0019129.1 mouse_genomes_project 11 128611295 128649186 + MGP_CBAJ_P0033210 Itgb4 protein_coding protein_coding MGP_CBAJ_T0033211.1 MGP_CBAJ_G0019129.1 mouse_genomes_project 11 128611413 128631165 + Itgb4 protein_coding processed_transcript MGP_CBAJ_T0033212.1 MGP_CBAJ_G0019129.1 mouse_genomes_project 11 128611549 128649187 + MGP_CBAJ_P0033212 Itgb4 protein_coding protein_coding MGP_CBAJ_T0033213.1 MGP_CBAJ_G0019129.1 mouse_genomes_project 11 128614356 128649187 + MGP_CBAJ_P0033213 Itgb4 protein_coding protein_coding MGP_CBAJ_T0033214.1 MGP_CBAJ_G0019129.1 mouse_genomes_project 11 128614356 128649187 + MGP_CBAJ_P0033214 Itgb4 protein_coding protein_coding MGP_CBAJ_T0033215.1 MGP_CBAJ_G0019129.1 mouse_genomes_project 11 128626566 128627672 + Itgb4 protein_coding processed_transcript MGP_CBAJ_T0033216.1 MGP_CBAJ_G0019129.1 mouse_genomes_project 11 128627573 128628595 + Itgb4 protein_coding processed_transcript MGP_CBAJ_T0033217.1 MGP_CBAJ_G0019129.1 mouse_genomes_project 11 128629336 128630735 + Itgb4 protein_coding processed_transcript MGP_CBAJ_T0012611.1 MGP_CBAJ_G0010723.1 mouse_genomes_project 11 127343691 127344146 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0029179.1 MGP_CBAJ_G0018161.1 mouse_genomes_project 11 65836020 65840817 + MGP_CBAJ_P0029179 Aldh3a1 protein_coding protein_coding MGP_CBAJ_T0029180.1 MGP_CBAJ_G0018161.1 mouse_genomes_project 11 65837104 65846905 + MGP_CBAJ_P0029180 Aldh3a1 protein_coding protein_coding MGP_CBAJ_T0029181.1 MGP_CBAJ_G0018161.1 mouse_genomes_project 11 65837228 65846905 + MGP_CBAJ_P0029181 Aldh3a1 protein_coding protein_coding MGP_CBAJ_T0098693.1 MGP_CBAJ_G0036948.1 mouse_genomes_project 11 74576249 74576352 + Gm22608 snRNA snRNA MGP_CBAJ_T0027728.1 MGP_CBAJ_G0017768.1 mouse_genomes_project 11 6991126 7018819 + MGP_CBAJ_P0027728 Gm11992 protein_coding protein_coding MGP_CBAJ_T0006202.1 MGP_CBAJ_G0005172.1 mouse_genomes_project 11 90170545 90173502 + Gm11426 lincRNA lincRNA MGP_CBAJ_T0012410.1 MGP_CBAJ_G0010522.1 mouse_genomes_project 11 34033520 34033967 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0030570.1 MGP_CBAJ_G0018481.1 mouse_genomes_project 11 84908670 84958690 + MGP_CBAJ_P0030570 Sez6 protein_coding protein_coding MGP_CBAJ_T0030571.1 MGP_CBAJ_G0018481.1 mouse_genomes_project 11 84908709 84958690 + Sez6 protein_coding retained_intron MGP_CBAJ_T0030572.1 MGP_CBAJ_G0018481.1 mouse_genomes_project 11 84908787 84943723 + Sez6 protein_coding retained_intron MGP_CBAJ_T0030573.1 MGP_CBAJ_G0018481.1 mouse_genomes_project 11 84908882 84958682 + MGP_CBAJ_P0030573 Sez6 protein_coding protein_coding MGP_CBAJ_T0030574.1 MGP_CBAJ_G0018481.1 mouse_genomes_project 11 84908909 84957703 + Sez6 protein_coding retained_intron MGP_CBAJ_T0030575.1 MGP_CBAJ_G0018481.1 mouse_genomes_project 11 84931086 84934520 + Sez6 protein_coding processed_transcript MGP_CBAJ_T0030576.1 MGP_CBAJ_G0018481.1 mouse_genomes_project 11 84933610 84958690 + MGP_CBAJ_P0030576 Sez6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030577.1 MGP_CBAJ_G0018481.1 mouse_genomes_project 11 84948641 84954131 + MGP_CBAJ_P0030577 Sez6 protein_coding protein_coding MGP_CBAJ_T0030578.1 MGP_CBAJ_G0018481.1 mouse_genomes_project 11 84952815 84954017 + Sez6 protein_coding retained_intron MGP_CBAJ_T0012427.1 MGP_CBAJ_G0010539.1 mouse_genomes_project 11 45768185 45768869 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003127.1 MGP_CBAJ_G0002903.1 mouse_genomes_project 11 67594598 67597974 - antisense antisense MGP_CBAJ_T0011166.1 MGP_CBAJ_G0009304.1 mouse_genomes_project 11 779762 779939 - Gm27624 misc_RNA misc_RNA MGP_CBAJ_T0033237.1 MGP_CBAJ_G0019134.1 mouse_genomes_project 11 128730663 128739030 - MGP_CBAJ_P0033237 Wbp2 protein_coding protein_coding MGP_CBAJ_T0033238.1 MGP_CBAJ_G0019134.1 mouse_genomes_project 11 128731342 128739030 - MGP_CBAJ_P0033238 Wbp2 protein_coding protein_coding MGP_CBAJ_T0033239.1 MGP_CBAJ_G0019134.1 mouse_genomes_project 11 128731487 128733575 - Wbp2 protein_coding processed_transcript MGP_CBAJ_T0033240.1 MGP_CBAJ_G0019134.1 mouse_genomes_project 11 128733918 128739030 - Wbp2 protein_coding processed_transcript MGP_CBAJ_T0033241.1 MGP_CBAJ_G0019134.1 mouse_genomes_project 11 128735171 128739007 - Wbp2 protein_coding processed_transcript MGP_CBAJ_T0017005.1 MGP_CBAJ_G0014953.1 mouse_genomes_project 11 116603498 116630987 + Gm11638 processed_transcript processed_transcript MGP_CBAJ_T0006223.1 MGP_CBAJ_G0005185.1 mouse_genomes_project 11 97517503 97521602 - Gm11496 lincRNA lincRNA MGP_CBAJ_T0028157.1 MGP_CBAJ_G0017864.1 mouse_genomes_project 11 33272780 33280053 - MGP_CBAJ_P0028157 Efcab9 protein_coding protein_coding MGP_CBAJ_T0028158.1 MGP_CBAJ_G0017864.1 mouse_genomes_project 11 33273369 33284609 - MGP_CBAJ_P0028158 Efcab9 protein_coding protein_coding MGP_CBAJ_T0028992.1 MGP_CBAJ_G0018116.1 mouse_genomes_project 11 63511751 63521972 - MGP_CBAJ_P0028992 Gjc2 protein_coding protein_coding MGP_CBAJ_T0028993.1 MGP_CBAJ_G0018116.1 mouse_genomes_project 11 63511751 63522359 - MGP_CBAJ_P0028993 Gjc2 protein_coding protein_coding MGP_CBAJ_T0033281.1 MGP_CBAJ_G0019141.1 mouse_genomes_project 11 128894559 128912050 - MGP_CBAJ_P0033281 Evpl protein_coding protein_coding MGP_CBAJ_T0029059.1 MGP_CBAJ_G0018137.1 mouse_genomes_project 11 64419760 64421520 - MGP_CBAJ_P0029059 Rasd1 protein_coding protein_coding MGP_CBAJ_T0012571.1 MGP_CBAJ_G0010683.1 mouse_genomes_project 11 109475177 109476771 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0029653.1 MGP_CBAJ_G0018264.1 mouse_genomes_project 11 75374992 75385106 + Trp53 protein_coding processed_transcript MGP_CBAJ_T0029654.1 MGP_CBAJ_G0018264.1 mouse_genomes_project 11 75381477 75386032 + MGP_CBAJ_P0029654 Trp53 protein_coding protein_coding MGP_CBAJ_T0029655.1 MGP_CBAJ_G0018264.1 mouse_genomes_project 11 75381477 75385909 + MGP_CBAJ_P0029655 Trp53 protein_coding protein_coding MGP_CBAJ_T0029656.1 MGP_CBAJ_G0018264.1 mouse_genomes_project 11 75383296 75384423 + Trp53 protein_coding processed_transcript MGP_CBAJ_T0033549.1 MGP_CBAJ_G0019197.1 mouse_genomes_project 11 132355908 132384888 + MGP_CBAJ_P0033549 Gaa protein_coding protein_coding MGP_CBAJ_T0033550.1 MGP_CBAJ_G0019197.1 mouse_genomes_project 11 132356047 132384888 + MGP_CBAJ_P0033550 Gaa protein_coding protein_coding MGP_CBAJ_T0033551.1 MGP_CBAJ_G0019197.1 mouse_genomes_project 11 132356049 132368571 + MGP_CBAJ_P0033551 Gaa protein_coding protein_coding MGP_CBAJ_T0033552.1 MGP_CBAJ_G0019197.1 mouse_genomes_project 11 132358550 132370258 + Gaa protein_coding processed_transcript MGP_CBAJ_T0033553.1 MGP_CBAJ_G0019197.1 mouse_genomes_project 11 132369686 132373487 + MGP_CBAJ_P0033553 Gaa protein_coding protein_coding MGP_CBAJ_T0033554.1 MGP_CBAJ_G0019197.1 mouse_genomes_project 11 132369974 132370733 + MGP_CBAJ_P0033554 Gaa protein_coding protein_coding MGP_CBAJ_T0033555.1 MGP_CBAJ_G0019197.1 mouse_genomes_project 11 132372870 132380978 + MGP_CBAJ_P0033555 Gaa protein_coding protein_coding MGP_CBAJ_T0033556.1 MGP_CBAJ_G0019197.1 mouse_genomes_project 11 132374040 132374655 + Gaa protein_coding processed_transcript MGP_CBAJ_T0006254.1 MGP_CBAJ_G0005208.1 mouse_genomes_project 11 121435603 121460947 + Gm11685 lincRNA lincRNA MGP_CBAJ_T0012575.1 MGP_CBAJ_G0010687.1 mouse_genomes_project 11 110319960 110320419 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101531.1 MGP_CBAJ_G0039563.1 mouse_genomes_project 11 48996706 48997006 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0003162.1 MGP_CBAJ_G0002932.1 mouse_genomes_project 11 86685936 86688243 - AU040972 antisense antisense MGP_CBAJ_T0099963.1 MGP_CBAJ_G0038218.1 mouse_genomes_project 11 117874051 117874184 + Gm22711 snoRNA snoRNA MGP_CBAJ_T0032158.1 MGP_CBAJ_G0018911.1 mouse_genomes_project 11 111811163 111812310 - MGP_CBAJ_P0032158 Coa3 protein_coding protein_coding MGP_CBAJ_T0032159.1 MGP_CBAJ_G0018911.1 mouse_genomes_project 11 111811533 111812139 - MGP_CBAJ_P0032159 Coa3 protein_coding protein_coding MGP_CBAJ_T0030837.1 MGP_CBAJ_G0018545.1 mouse_genomes_project 11 89535242 89545573 - MGP_CBAJ_P0030837 Gm17268 protein_coding protein_coding MGP_CBAJ_T0101557.1 MGP_CBAJ_G0039589.1 mouse_genomes_project 11 104077463 104078203 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0032116.1 MGP_CBAJ_G0018902.1 mouse_genomes_project 11 111616396 111626563 + MGP_CBAJ_P0032116 Tubg1 protein_coding protein_coding MGP_CBAJ_T0032117.1 MGP_CBAJ_G0018902.1 mouse_genomes_project 11 111616601 111626567 + MGP_CBAJ_P0032117 Tubg1 protein_coding unknown_likely_coding MGP_CBAJ_T0032118.1 MGP_CBAJ_G0018902.1 mouse_genomes_project 11 111624477 111625972 + Tubg1 protein_coding processed_transcript MGP_CBAJ_T0031480.1 MGP_CBAJ_G0018709.1 mouse_genomes_project 11 104795883 104883772 + MGP_CBAJ_P0031480 Spop protein_coding protein_coding MGP_CBAJ_T0031481.1 MGP_CBAJ_G0018709.1 mouse_genomes_project 11 104795941 104862694 + MGP_CBAJ_P0031481 Spop protein_coding protein_coding MGP_CBAJ_T0031482.1 MGP_CBAJ_G0018709.1 mouse_genomes_project 11 104796030 104862673 + MGP_CBAJ_P0031482 Spop protein_coding protein_coding MGP_CBAJ_T0031483.1 MGP_CBAJ_G0018709.1 mouse_genomes_project 11 104796030 104883772 + MGP_CBAJ_P0031483 Spop protein_coding protein_coding MGP_CBAJ_T0031484.1 MGP_CBAJ_G0018709.1 mouse_genomes_project 11 104862677 104880670 + Spop protein_coding processed_transcript MGP_CBAJ_T0009637.1 MGP_CBAJ_G0007775.1 mouse_genomes_project 11 116858957 116859074 + Gm23990 miRNA miRNA MGP_CBAJ_T0028459.1 MGP_CBAJ_G0017953.1 mouse_genomes_project 11 52317693 52318629 + MGP_CBAJ_P0028459 Olfr1388 protein_coding protein_coding MGP_CBAJ_T0032160.1 MGP_CBAJ_G0018912.1 mouse_genomes_project 11 111812207 111819703 + Cntd1 protein_coding processed_transcript MGP_CBAJ_T0032161.1 MGP_CBAJ_G0018912.1 mouse_genomes_project 11 111812291 111821859 + MGP_CBAJ_P0032161 Cntd1 protein_coding protein_coding MGP_CBAJ_T0032162.1 MGP_CBAJ_G0018912.1 mouse_genomes_project 11 111819212 111829475 + Cntd1 protein_coding processed_transcript MGP_CBAJ_T0033581.1 MGP_CBAJ_G0019203.1 mouse_genomes_project 11 132639141 132661608 + MGP_CBAJ_P0033581 Endov protein_coding protein_coding MGP_CBAJ_T0033582.1 MGP_CBAJ_G0019203.1 mouse_genomes_project 11 132639168 132657931 + MGP_CBAJ_P0033582 Endov protein_coding nonsense_mediated_decay MGP_CBAJ_T0033583.1 MGP_CBAJ_G0019203.1 mouse_genomes_project 11 132639169 132659819 + MGP_CBAJ_P0033583 Endov protein_coding nonsense_mediated_decay MGP_CBAJ_T0033584.1 MGP_CBAJ_G0019203.1 mouse_genomes_project 11 132639183 132657991 + MGP_CBAJ_P0033584 Endov protein_coding protein_coding MGP_CBAJ_T0033585.1 MGP_CBAJ_G0019203.1 mouse_genomes_project 11 132639220 132657619 + MGP_CBAJ_P0033585 Endov protein_coding protein_coding MGP_CBAJ_T0033586.1 MGP_CBAJ_G0019203.1 mouse_genomes_project 11 132639345 132652842 + MGP_CBAJ_P0033586 Endov protein_coding nonsense_mediated_decay MGP_CBAJ_T0033587.1 MGP_CBAJ_G0019203.1 mouse_genomes_project 11 132639424 132661608 + MGP_CBAJ_P0033587 Endov protein_coding protein_coding MGP_CBAJ_T0033588.1 MGP_CBAJ_G0019203.1 mouse_genomes_project 11 132639470 132648545 + Endov protein_coding retained_intron MGP_CBAJ_T0033589.1 MGP_CBAJ_G0019203.1 mouse_genomes_project 11 132639579 132650555 + Endov protein_coding processed_transcript MGP_CBAJ_T0033590.1 MGP_CBAJ_G0019203.1 mouse_genomes_project 11 132649705 132657629 + Endov protein_coding retained_intron MGP_CBAJ_T0032798.1 MGP_CBAJ_G0019042.1 mouse_genomes_project 11 119284663 119300696 - MGP_CBAJ_P0032798 Cacng1 protein_coding protein_coding MGP_CBAJ_T0006259.1 MGP_CBAJ_G0005213.1 mouse_genomes_project 11 124968368 124977024 - Gm11681 lincRNA lincRNA MGP_CBAJ_T0006089.1 MGP_CBAJ_G0005078.1 mouse_genomes_project 11 17650838 17655008 - Gm28401 lincRNA lincRNA MGP_CBAJ_T0006090.1 MGP_CBAJ_G0005078.1 mouse_genomes_project 11 17650933 17655027 - Gm28401 lincRNA lincRNA MGP_CBAJ_T0028684.1 MGP_CBAJ_G0018012.1 mouse_genomes_project 11 56220241 56675249 + MGP_CBAJ_P0028684 Fstl4 protein_coding protein_coding MGP_CBAJ_T0012455.1 MGP_CBAJ_G0010567.1 mouse_genomes_project 11 57670616 57671059 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0027433.1 MGP_CBAJ_G0017700.1 mouse_genomes_project 11 1254219 1265203 + Sec14l4 protein_coding processed_transcript MGP_CBAJ_T0027434.1 MGP_CBAJ_G0017700.1 mouse_genomes_project 11 1254222 1266469 + Sec14l4 protein_coding processed_transcript MGP_CBAJ_T0027435.1 MGP_CBAJ_G0017700.1 mouse_genomes_project 11 1254369 1266089 + Sec14l4 protein_coding processed_transcript MGP_CBAJ_T0027436.1 MGP_CBAJ_G0017700.1 mouse_genomes_project 11 1254539 1268823 + Sec14l4 protein_coding processed_transcript MGP_CBAJ_T0027437.1 MGP_CBAJ_G0017700.1 mouse_genomes_project 11 1254539 1270511 + Sec14l4 protein_coding processed_transcript MGP_CBAJ_T0027438.1 MGP_CBAJ_G0017700.1 mouse_genomes_project 11 1254539 1270511 + MGP_CBAJ_P0027438 Sec14l4 protein_coding protein_coding MGP_CBAJ_T0027439.1 MGP_CBAJ_G0017700.1 mouse_genomes_project 11 1254598 1268823 + Sec14l4 protein_coding processed_transcript MGP_CBAJ_T0027440.1 MGP_CBAJ_G0017700.1 mouse_genomes_project 11 1264470 1268823 + Sec14l4 protein_coding processed_transcript MGP_CBAJ_T0030692.1 MGP_CBAJ_G0018508.1 mouse_genomes_project 11 85604324 85609413 - MGP_CBAJ_P0030692 Tmem199 protein_coding protein_coding MGP_CBAJ_T0030693.1 MGP_CBAJ_G0018508.1 mouse_genomes_project 11 85604521 85606088 - Tmem199 protein_coding retained_intron MGP_CBAJ_T0030694.1 MGP_CBAJ_G0018508.1 mouse_genomes_project 11 85605777 85609286 - Tmem199 protein_coding retained_intron MGP_CBAJ_T0030695.1 MGP_CBAJ_G0018508.1 mouse_genomes_project 11 85606754 85609324 - Tmem199 protein_coding retained_intron MGP_CBAJ_T0028464.1 MGP_CBAJ_G0017958.1 mouse_genomes_project 11 52396222 52401515 + MGP_CBAJ_P0028464 Olfr1383 protein_coding protein_coding MGP_CBAJ_T0028465.1 MGP_CBAJ_G0017958.1 mouse_genomes_project 11 52400119 52401515 + MGP_CBAJ_P0028465 Olfr1383 protein_coding protein_coding MGP_CBAJ_T0029548.1 MGP_CBAJ_G0018240.1 mouse_genomes_project 11 74715930 74742039 + Ctc1 protein_coding retained_intron MGP_CBAJ_T0029549.1 MGP_CBAJ_G0018240.1 mouse_genomes_project 11 74716090 74756560 + MGP_CBAJ_P0029549 Ctc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029550.1 MGP_CBAJ_G0018240.1 mouse_genomes_project 11 74716101 74756557 + MGP_CBAJ_P0029550 Ctc1 protein_coding protein_coding MGP_CBAJ_T0029551.1 MGP_CBAJ_G0018240.1 mouse_genomes_project 11 74716106 74756562 + MGP_CBAJ_P0029551 Ctc1 protein_coding protein_coding MGP_CBAJ_T0029552.1 MGP_CBAJ_G0018240.1 mouse_genomes_project 11 74716138 74739643 + Ctc1 protein_coding processed_transcript MGP_CBAJ_T0029553.1 MGP_CBAJ_G0018240.1 mouse_genomes_project 11 74744556 74746081 + Ctc1 protein_coding retained_intron MGP_CBAJ_T0029554.1 MGP_CBAJ_G0018240.1 mouse_genomes_project 11 74745942 74748438 + Ctc1 protein_coding processed_transcript MGP_CBAJ_T0029555.1 MGP_CBAJ_G0018240.1 mouse_genomes_project 11 74748118 74755035 + Ctc1 protein_coding processed_transcript MGP_CBAJ_T0029556.1 MGP_CBAJ_G0018240.1 mouse_genomes_project 11 74753961 74755908 + Ctc1 protein_coding retained_intron MGP_CBAJ_T0029557.1 MGP_CBAJ_G0018240.1 mouse_genomes_project 11 74754607 74755893 + Ctc1 protein_coding retained_intron MGP_CBAJ_T0029558.1 MGP_CBAJ_G0018240.1 mouse_genomes_project 11 74754965 74756267 + Ctc1 protein_coding retained_intron MGP_CBAJ_T0028731.1 MGP_CBAJ_G0018026.1 mouse_genomes_project 11 57181602 57201366 - Il4 protein_coding processed_transcript MGP_CBAJ_T0028732.1 MGP_CBAJ_G0018026.1 mouse_genomes_project 11 57196601 57202811 - MGP_CBAJ_P0028732 Il4 protein_coding protein_coding MGP_CBAJ_T0028733.1 MGP_CBAJ_G0018026.1 mouse_genomes_project 11 57196601 57201480 - MGP_CBAJ_P0028733 Il4 protein_coding protein_coding MGP_CBAJ_T0028734.1 MGP_CBAJ_G0018026.1 mouse_genomes_project 11 57196601 57202494 - MGP_CBAJ_P0028734 Il4 protein_coding protein_coding MGP_CBAJ_T0012496.1 MGP_CBAJ_G0010608.1 mouse_genomes_project 11 75439807 75440196 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0033371.1 MGP_CBAJ_G0019159.1 mouse_genomes_project 11 129542419 129571102 - MGP_CBAJ_P0033371 Mxra7 protein_coding protein_coding MGP_CBAJ_T0033372.1 MGP_CBAJ_G0019159.1 mouse_genomes_project 11 129550660 129571069 - MGP_CBAJ_P0033372 Mxra7 protein_coding protein_coding MGP_CBAJ_T0033373.1 MGP_CBAJ_G0019159.1 mouse_genomes_project 11 129550852 129571059 - MGP_CBAJ_P0033373 Mxra7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031550.1 MGP_CBAJ_G0018734.1 mouse_genomes_project 11 105909239 105912362 + Hoxb2 protein_coding retained_intron MGP_CBAJ_T0031551.1 MGP_CBAJ_G0018734.1 mouse_genomes_project 11 105910342 105912717 + MGP_CBAJ_P0031551 Hoxb2 protein_coding protein_coding MGP_CBAJ_T0029414.1 MGP_CBAJ_G0018209.1 mouse_genomes_project 11 72383884 72394051 + MGP_CBAJ_P0029414 Tmem220 protein_coding protein_coding MGP_CBAJ_T0029415.1 MGP_CBAJ_G0018209.1 mouse_genomes_project 11 72383884 72393533 + MGP_CBAJ_P0029415 Tmem220 protein_coding protein_coding MGP_CBAJ_T0027567.1 MGP_CBAJ_G0017727.1 mouse_genomes_project 11 2502475 2532092 - MGP_CBAJ_P0027567 Emid1 protein_coding protein_coding MGP_CBAJ_T0027568.1 MGP_CBAJ_G0017727.1 mouse_genomes_project 11 2502475 2554537 - MGP_CBAJ_P0027568 Emid1 protein_coding protein_coding MGP_CBAJ_T0027569.1 MGP_CBAJ_G0017727.1 mouse_genomes_project 11 2502476 2554520 - MGP_CBAJ_P0027569 Emid1 protein_coding protein_coding MGP_CBAJ_T0027570.1 MGP_CBAJ_G0017727.1 mouse_genomes_project 11 2502481 2530794 - MGP_CBAJ_P0027570 Emid1 protein_coding protein_coding MGP_CBAJ_T0027571.1 MGP_CBAJ_G0017727.1 mouse_genomes_project 11 2502855 2530556 - Emid1 protein_coding retained_intron MGP_CBAJ_T0027572.1 MGP_CBAJ_G0017727.1 mouse_genomes_project 11 2503117 2530377 - MGP_CBAJ_P0027572 Emid1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027573.1 MGP_CBAJ_G0017727.1 mouse_genomes_project 11 2533288 2554517 - MGP_CBAJ_P0027573 Emid1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027574.1 MGP_CBAJ_G0017727.1 mouse_genomes_project 11 2536721 2552564 - Emid1 protein_coding processed_transcript MGP_CBAJ_T0027441.1 MGP_CBAJ_G0017701.1 mouse_genomes_project 11 1286816 1303750 + MGP_CBAJ_P0027441 Sec14l3 protein_coding protein_coding MGP_CBAJ_T0027442.1 MGP_CBAJ_G0017701.1 mouse_genomes_project 11 1286866 1292541 + Sec14l3 protein_coding retained_intron MGP_CBAJ_T0027443.1 MGP_CBAJ_G0017701.1 mouse_genomes_project 11 1286927 1302327 + Sec14l3 protein_coding processed_transcript MGP_CBAJ_T0027444.1 MGP_CBAJ_G0017701.1 mouse_genomes_project 11 1286927 1302327 + Sec14l3 protein_coding processed_transcript MGP_CBAJ_T0027445.1 MGP_CBAJ_G0017701.1 mouse_genomes_project 11 1294501 1302763 + Sec14l3 protein_coding processed_transcript MGP_CBAJ_T0028881.1 MGP_CBAJ_G0018064.1 mouse_genomes_project 11 61745145 61900254 + MGP_CBAJ_P0028881 Galnt10 protein_coding protein_coding MGP_CBAJ_T0028882.1 MGP_CBAJ_G0018064.1 mouse_genomes_project 11 61745168 61838468 + MGP_CBAJ_P0028882 Galnt10 protein_coding protein_coding MGP_CBAJ_T0012627.1 MGP_CBAJ_G0010739.1 mouse_genomes_project 11 134550048 134550503 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0029700.1 MGP_CBAJ_G0018273.1 mouse_genomes_project 11 75489550 75498270 - MGP_CBAJ_P0029700 Senp3 protein_coding protein_coding MGP_CBAJ_T0029701.1 MGP_CBAJ_G0018273.1 mouse_genomes_project 11 75489551 75491412 - Senp3 protein_coding retained_intron MGP_CBAJ_T0029702.1 MGP_CBAJ_G0018273.1 mouse_genomes_project 11 75489556 75498508 - MGP_CBAJ_P0029702 Senp3 protein_coding protein_coding MGP_CBAJ_T0029703.1 MGP_CBAJ_G0018273.1 mouse_genomes_project 11 75489710 75494558 - Senp3 protein_coding retained_intron MGP_CBAJ_T0029704.1 MGP_CBAJ_G0018273.1 mouse_genomes_project 11 75489776 75495126 - MGP_CBAJ_P0029704 Senp3 protein_coding protein_coding MGP_CBAJ_T0029705.1 MGP_CBAJ_G0018273.1 mouse_genomes_project 11 75490388 75490879 - Senp3 protein_coding retained_intron MGP_CBAJ_T0029706.1 MGP_CBAJ_G0018273.1 mouse_genomes_project 11 75490668 75493383 - Senp3 protein_coding processed_transcript MGP_CBAJ_T0029707.1 MGP_CBAJ_G0018273.1 mouse_genomes_project 11 75493483 75494452 - Senp3 protein_coding retained_intron MGP_CBAJ_T0029708.1 MGP_CBAJ_G0018273.1 mouse_genomes_project 11 75494595 75495634 - Senp3 protein_coding retained_intron MGP_CBAJ_T0031661.1 MGP_CBAJ_G0018758.1 mouse_genomes_project 11 107262365 107271909 - MGP_CBAJ_P0031661 4933428G20Rik protein_coding protein_coding MGP_CBAJ_T0017007.1 MGP_CBAJ_G0014955.1 mouse_genomes_project 11 119084427 119113253 - processed_transcript processed_transcript MGP_CBAJ_T0028906.1 MGP_CBAJ_G0018073.1 mouse_genomes_project 11 62411577 62441406 + MGP_CBAJ_P0028906 Irgm2 protein_coding protein_coding MGP_CBAJ_T0028907.1 MGP_CBAJ_G0018073.1 mouse_genomes_project 11 62433869 62441414 + MGP_CBAJ_P0028907 Irgm2 protein_coding protein_coding MGP_CBAJ_T0029422.1 MGP_CBAJ_G0018211.1 mouse_genomes_project 11 72411419 72424075 + MGP_CBAJ_P0029422 Sco1 protein_coding protein_coding MGP_CBAJ_T0029423.1 MGP_CBAJ_G0018211.1 mouse_genomes_project 11 72411419 72424316 + MGP_CBAJ_P0029423 Sco1 protein_coding protein_coding MGP_CBAJ_T0029424.1 MGP_CBAJ_G0018211.1 mouse_genomes_project 11 72412518 72422820 + Sco1 protein_coding processed_transcript MGP_CBAJ_T0029425.1 MGP_CBAJ_G0018211.1 mouse_genomes_project 11 72417070 72425814 + Sco1 protein_coding processed_transcript MGP_CBAJ_T0012411.1 MGP_CBAJ_G0010523.1 mouse_genomes_project 11 34289191 34289579 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012625.1 MGP_CBAJ_G0010737.1 mouse_genomes_project 11 134364365 134364658 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0028221.1 MGP_CBAJ_G0017886.1 mouse_genomes_project 11 36974848 37134126 - MGP_CBAJ_P0028221 Wwc1 protein_coding protein_coding MGP_CBAJ_T0028222.1 MGP_CBAJ_G0017886.1 mouse_genomes_project 11 36990908 36992272 - Wwc1 protein_coding processed_transcript MGP_CBAJ_T0028223.1 MGP_CBAJ_G0017886.1 mouse_genomes_project 11 37010127 37018824 - Wwc1 protein_coding processed_transcript MGP_CBAJ_T0028338.1 MGP_CBAJ_G0017914.1 mouse_genomes_project 11 48362369 48400924 + MGP_CBAJ_P0028338 Sox30 protein_coding protein_coding MGP_CBAJ_T0030512.1 MGP_CBAJ_G0018470.1 mouse_genomes_project 11 84341436 84350939 - MGP_CBAJ_P0030512 Ankrd13b protein_coding protein_coding MGP_CBAJ_T0030513.1 MGP_CBAJ_G0018470.1 mouse_genomes_project 11 84341436 84364169 - MGP_CBAJ_P0030513 Ankrd13b protein_coding protein_coding MGP_CBAJ_T0030514.1 MGP_CBAJ_G0018470.1 mouse_genomes_project 11 84341438 84344577 - Ankrd13b protein_coding retained_intron MGP_CBAJ_T0030515.1 MGP_CBAJ_G0018470.1 mouse_genomes_project 11 84341438 84364181 - MGP_CBAJ_P0030515 Ankrd13b protein_coding protein_coding MGP_CBAJ_T0030516.1 MGP_CBAJ_G0018470.1 mouse_genomes_project 11 84343066 84351268 - Ankrd13b protein_coding retained_intron MGP_CBAJ_T0030517.1 MGP_CBAJ_G0018470.1 mouse_genomes_project 11 84343723 84350750 - MGP_CBAJ_P0030517 Ankrd13b protein_coding protein_coding MGP_CBAJ_T0017006.1 MGP_CBAJ_G0014954.1 mouse_genomes_project 11 118963861 118973244 + Gm11714 processed_transcript processed_transcript MGP_CBAJ_T0029881.1 MGP_CBAJ_G0018313.1 mouse_genomes_project 11 76164204 76168826 - MGP_CBAJ_P0029881 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029886.1 MGP_CBAJ_G0018313.1 mouse_genomes_project 11 76164248 76168799 - MGP_CBAJ_P0029886 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027846.1 MGP_CBAJ_G0017797.1 mouse_genomes_project 11 19897435 19961235 - MGP_CBAJ_P0027846 Aftph protein_coding protein_coding MGP_CBAJ_T0027847.1 MGP_CBAJ_G0017797.1 mouse_genomes_project 11 19897435 19945300 - MGP_CBAJ_P0027847 Aftph protein_coding protein_coding MGP_CBAJ_T0027848.1 MGP_CBAJ_G0017797.1 mouse_genomes_project 11 19898068 19944835 - MGP_CBAJ_P0027848 Aftph protein_coding nonsense_mediated_decay MGP_CBAJ_T0027849.1 MGP_CBAJ_G0017797.1 mouse_genomes_project 11 19898094 19961098 - MGP_CBAJ_P0027849 Aftph protein_coding protein_coding MGP_CBAJ_T0027850.1 MGP_CBAJ_G0017797.1 mouse_genomes_project 11 19898333 19905421 - Aftph protein_coding retained_intron MGP_CBAJ_T0027851.1 MGP_CBAJ_G0017797.1 mouse_genomes_project 11 19898470 19943865 - MGP_CBAJ_P0027851 Aftph protein_coding protein_coding MGP_CBAJ_T0027852.1 MGP_CBAJ_G0017797.1 mouse_genomes_project 11 19908630 19925418 - Aftph protein_coding retained_intron MGP_CBAJ_T0027853.1 MGP_CBAJ_G0017797.1 mouse_genomes_project 11 19915792 19925344 - Aftph protein_coding retained_intron MGP_CBAJ_T0027854.1 MGP_CBAJ_G0017797.1 mouse_genomes_project 11 19921718 19925324 - Aftph protein_coding retained_intron MGP_CBAJ_T0031735.1 MGP_CBAJ_G0018775.1 mouse_genomes_project 11 107917499 107934233 - MGP_CBAJ_P0031735 Stac2 protein_coding protein_coding MGP_CBAJ_T0031736.1 MGP_CBAJ_G0018775.1 mouse_genomes_project 11 107920974 107924383 - MGP_CBAJ_P0031736 Stac2 protein_coding protein_coding MGP_CBAJ_T0003174.1 MGP_CBAJ_G0002942.1 mouse_genomes_project 11 93161895 93162344 + Appbp2os antisense pseudogene MGP_CBAJ_T0003175.1 MGP_CBAJ_G0002942.1 mouse_genomes_project 11 93162291 93165426 + Appbp2os antisense antisense MGP_CBAJ_T0033200.1 MGP_CBAJ_G0019127.1 mouse_genomes_project 11 128542904 128544774 + MGP_CBAJ_P0033200 Smim6 protein_coding protein_coding MGP_CBAJ_T0031118.1 MGP_CBAJ_G0018620.1 mouse_genomes_project 11 94835786 94876749 - MGP_CBAJ_P0031118 Dhx40 protein_coding protein_coding MGP_CBAJ_T0031119.1 MGP_CBAJ_G0018620.1 mouse_genomes_project 11 94842307 94869938 - MGP_CBAJ_P0031119 Dhx40 protein_coding protein_coding MGP_CBAJ_T0031120.1 MGP_CBAJ_G0018620.1 mouse_genomes_project 11 94853133 94857837 - Dhx40 protein_coding processed_transcript MGP_CBAJ_T0031121.1 MGP_CBAJ_G0018620.1 mouse_genomes_project 11 94868733 94876042 - Dhx40 protein_coding processed_transcript MGP_CBAJ_T0099903.1 MGP_CBAJ_G0038158.1 mouse_genomes_project 11 9637543 9637671 - Gm26458 snoRNA snoRNA MGP_CBAJ_T0099938.1 MGP_CBAJ_G0038193.1 mouse_genomes_project 11 78835514 78835660 - Gm24143 snoRNA snoRNA MGP_CBAJ_T0009597.1 MGP_CBAJ_G0007735.1 mouse_genomes_project 11 83899078 83899187 - Mir423 miRNA miRNA MGP_CBAJ_T0032120.1 MGP_CBAJ_G0018904.1 mouse_genomes_project 11 111671501 111679782 - MGP_CBAJ_P0032120 Plekhh3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032121.1 MGP_CBAJ_G0018904.1 mouse_genomes_project 11 111671501 111680178 - MGP_CBAJ_P0032121 Plekhh3 protein_coding protein_coding MGP_CBAJ_T0032122.1 MGP_CBAJ_G0018904.1 mouse_genomes_project 11 111671501 111674443 - MGP_CBAJ_P0032122 Plekhh3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032123.1 MGP_CBAJ_G0018904.1 mouse_genomes_project 11 111671504 111680144 - MGP_CBAJ_P0032123 Plekhh3 protein_coding protein_coding MGP_CBAJ_T0032124.1 MGP_CBAJ_G0018904.1 mouse_genomes_project 11 111672989 111674147 - Plekhh3 protein_coding processed_transcript MGP_CBAJ_T0032125.1 MGP_CBAJ_G0018904.1 mouse_genomes_project 11 111676300 111679181 - MGP_CBAJ_P0032125 Plekhh3 protein_coding protein_coding MGP_CBAJ_T0006147.1 MGP_CBAJ_G0005128.1 mouse_genomes_project 11 54235354 54244832 + 9230009I02Rik lincRNA lincRNA MGP_CBAJ_T0003129.1 MGP_CBAJ_G0002905.1 mouse_genomes_project 11 67779284 67781797 - Tvp23bos antisense antisense MGP_CBAJ_T0033464.1 MGP_CBAJ_G0019177.1 mouse_genomes_project 11 130826641 130831434 + MGP_CBAJ_P0033464 Tmem235 protein_coding protein_coding MGP_CBAJ_T0012546.1 MGP_CBAJ_G0010658.1 mouse_genomes_project 11 94181757 94182071 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0031916.1 MGP_CBAJ_G0018831.1 mouse_genomes_project 11 109812553 109813216 - MGP_CBAJ_P0031916 protein_coding protein_coding MGP_CBAJ_T0000810.1 MGP_CBAJ_G0000746.1 mouse_genomes_project 11 18040855 18041711 - TEC TEC MGP_CBAJ_T0027963.1 MGP_CBAJ_G0017821.1 mouse_genomes_project 11 23363710 23398091 - MGP_CBAJ_P0027963 Rel protein_coding protein_coding MGP_CBAJ_T0012422.1 MGP_CBAJ_G0010534.1 mouse_genomes_project 11 43147831 43148375 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0032553.1 MGP_CBAJ_G0018989.1 mouse_genomes_project 11 114761423 114811778 + MGP_CBAJ_P0032553 Wnt3 protein_coding protein_coding MGP_CBAJ_T0000817.1 MGP_CBAJ_G0000753.1 mouse_genomes_project 11 117242900 117244446 + TEC TEC MGP_CBAJ_T0028456.1 MGP_CBAJ_G0017950.1 mouse_genomes_project 11 52189114 52191126 + MGP_CBAJ_P0028456 protein_coding protein_coding MGP_CBAJ_T0030263.1 MGP_CBAJ_G0018414.1 mouse_genomes_project 11 80759791 80760739 - MGP_CBAJ_P0030263 Olfr410 protein_coding protein_coding MGP_CBAJ_T0012319.1 MGP_CBAJ_G0010431.1 mouse_genomes_project 11 3762987 3763343 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012376.1 MGP_CBAJ_G0010488.1 mouse_genomes_project 11 22100021 22100311 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0029919.1 MGP_CBAJ_G0018321.1 mouse_genomes_project 11 76403452 76409104 - MGP_CBAJ_P0029919 Cxcl16 protein_coding protein_coding MGP_CBAJ_T0029920.1 MGP_CBAJ_G0018321.1 mouse_genomes_project 11 76403707 76408528 - MGP_CBAJ_P0029920 Cxcl16 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029921.1 MGP_CBAJ_G0018321.1 mouse_genomes_project 11 76404339 76408952 - Cxcl16 protein_coding retained_intron MGP_CBAJ_T0003176.1 MGP_CBAJ_G0002943.1 mouse_genomes_project 11 93679583 93696005 - Bcas3os1 antisense antisense MGP_CBAJ_T0003177.1 MGP_CBAJ_G0002943.1 mouse_genomes_project 11 93680717 93696005 - Bcas3os1 antisense antisense MGP_CBAJ_T0027994.1 MGP_CBAJ_G0017828.1 mouse_genomes_project 11 26518383 26519005 + MGP_CBAJ_P0027994 Gm6899 protein_coding protein_coding MGP_CBAJ_T0031486.1 MGP_CBAJ_G0018711.1 mouse_genomes_project 11 104974526 104993458 - MGP_CBAJ_P0031486 Ngfr protein_coding protein_coding MGP_CBAJ_T0003196.1 MGP_CBAJ_G0002957.1 mouse_genomes_project 11 104746173 104758039 - Gm29477 antisense antisense MGP_CBAJ_T0029790.1 MGP_CBAJ_G0018296.1 mouse_genomes_project 11 75810321 75816217 - Slc2a4 protein_coding retained_intron MGP_CBAJ_T0029791.1 MGP_CBAJ_G0018296.1 mouse_genomes_project 11 75811151 75816023 - MGP_CBAJ_P0029791 Slc2a4 protein_coding protein_coding MGP_CBAJ_T0029792.1 MGP_CBAJ_G0018296.1 mouse_genomes_project 11 75811574 75816206 - MGP_CBAJ_P0029792 Slc2a4 protein_coding protein_coding MGP_CBAJ_T0029793.1 MGP_CBAJ_G0018296.1 mouse_genomes_project 11 75813051 75816189 - MGP_CBAJ_P0029793 Slc2a4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029794.1 MGP_CBAJ_G0018296.1 mouse_genomes_project 11 75813051 75816016 - MGP_CBAJ_P0029794 Slc2a4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029795.1 MGP_CBAJ_G0018296.1 mouse_genomes_project 11 75813345 75816187 - MGP_CBAJ_P0029795 Slc2a4 protein_coding protein_coding MGP_CBAJ_T0029796.1 MGP_CBAJ_G0018296.1 mouse_genomes_project 11 75813851 75816196 - MGP_CBAJ_P0029796 Slc2a4 protein_coding protein_coding MGP_CBAJ_T0098704.1 MGP_CBAJ_G0036959.1 mouse_genomes_project 11 86801459 86801563 + Gm23293 snRNA snRNA MGP_CBAJ_T0029877.1 MGP_CBAJ_G0018311.1 mouse_genomes_project 11 76153127 76158739 - MGP_CBAJ_P0029877 Bcl6b protein_coding protein_coding MGP_CBAJ_T0029878.1 MGP_CBAJ_G0018311.1 mouse_genomes_project 11 76157539 76158677 - MGP_CBAJ_P0029878 Bcl6b protein_coding protein_coding MGP_CBAJ_T0029879.1 MGP_CBAJ_G0018311.1 mouse_genomes_project 11 76157608 76158798 - Bcl6b protein_coding retained_intron MGP_CBAJ_T0009587.1 MGP_CBAJ_G0007725.1 mouse_genomes_project 11 76789052 76789145 - Gm22760 miRNA miRNA MGP_CBAJ_T0033444.1 MGP_CBAJ_G0019173.1 mouse_genomes_project 11 130772086 130775858 + MGP_CBAJ_P0033444 Syngr2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033445.1 MGP_CBAJ_G0019173.1 mouse_genomes_project 11 130772089 130776693 + MGP_CBAJ_P0033445 Syngr2 protein_coding protein_coding MGP_CBAJ_T0033446.1 MGP_CBAJ_G0019173.1 mouse_genomes_project 11 130772098 130776702 + MGP_CBAJ_P0033446 Syngr2 protein_coding protein_coding MGP_CBAJ_T0033447.1 MGP_CBAJ_G0019173.1 mouse_genomes_project 11 130774640 130775501 + MGP_CBAJ_P0033447 Syngr2 protein_coding protein_coding MGP_CBAJ_T0033448.1 MGP_CBAJ_G0019173.1 mouse_genomes_project 11 130775373 130775795 + Syngr2 protein_coding retained_intron MGP_CBAJ_T0003275.1 MGP_CBAJ_G0003022.1 mouse_genomes_project 11 129906052 129908172 - Gm11730 antisense antisense MGP_CBAJ_T0003276.1 MGP_CBAJ_G0003022.1 mouse_genomes_project 11 129906189 129908132 - Gm11730 antisense antisense MGP_CBAJ_T0032994.1 MGP_CBAJ_G0019085.1 mouse_genomes_project 11 127359508 127371273 - MGP_CBAJ_P0032994 Cd300lb protein_coding protein_coding MGP_CBAJ_T0032995.1 MGP_CBAJ_G0019085.1 mouse_genomes_project 11 127359508 127371258 - MGP_CBAJ_P0032995 Cd300lb protein_coding protein_coding MGP_CBAJ_T0032996.1 MGP_CBAJ_G0019085.1 mouse_genomes_project 11 127365117 127371174 - Cd300lb protein_coding processed_transcript MGP_CBAJ_T0031951.1 MGP_CBAJ_G0018862.1 mouse_genomes_project 11 110482923 110487103 - MGP_CBAJ_P0031951 Krt15 protein_coding protein_coding MGP_CBAJ_T0031952.1 MGP_CBAJ_G0018862.1 mouse_genomes_project 11 110484200 110485570 - Krt15 protein_coding retained_intron MGP_CBAJ_T0003149.1 MGP_CBAJ_G0002921.1 mouse_genomes_project 11 75223402 75228532 + Dnah2os antisense antisense MGP_CBAJ_T0033738.1 MGP_CBAJ_G0019235.1 mouse_genomes_project 11 133909376 133917548 - MGP_CBAJ_P0033738 Pcyt2 protein_coding protein_coding MGP_CBAJ_T0033739.1 MGP_CBAJ_G0019235.1 mouse_genomes_project 11 133909682 133917537 - MGP_CBAJ_P0033739 Pcyt2 protein_coding protein_coding MGP_CBAJ_T0033740.1 MGP_CBAJ_G0019235.1 mouse_genomes_project 11 133910283 133911721 - Pcyt2 protein_coding retained_intron MGP_CBAJ_T0033741.1 MGP_CBAJ_G0019235.1 mouse_genomes_project 11 133910487 133911693 - Pcyt2 protein_coding retained_intron MGP_CBAJ_T0033742.1 MGP_CBAJ_G0019235.1 mouse_genomes_project 11 133911239 133912686 - Pcyt2 protein_coding retained_intron MGP_CBAJ_T0033743.1 MGP_CBAJ_G0019235.1 mouse_genomes_project 11 133911816 133917520 - Pcyt2 protein_coding retained_intron MGP_CBAJ_T0033744.1 MGP_CBAJ_G0019235.1 mouse_genomes_project 11 133912207 133913307 - Pcyt2 protein_coding retained_intron MGP_CBAJ_T0033745.1 MGP_CBAJ_G0019235.1 mouse_genomes_project 11 133912546 133913201 - Pcyt2 protein_coding retained_intron MGP_CBAJ_T0033746.1 MGP_CBAJ_G0019235.1 mouse_genomes_project 11 133912588 133914137 - Pcyt2 protein_coding retained_intron MGP_CBAJ_T0033747.1 MGP_CBAJ_G0019235.1 mouse_genomes_project 11 133912641 133917525 - Pcyt2 protein_coding processed_transcript MGP_CBAJ_T0033748.1 MGP_CBAJ_G0019235.1 mouse_genomes_project 11 133914787 133917522 - Pcyt2 protein_coding retained_intron MGP_CBAJ_T0033749.1 MGP_CBAJ_G0019235.1 mouse_genomes_project 11 133915058 133917481 - Pcyt2 protein_coding retained_intron MGP_CBAJ_T0098727.1 MGP_CBAJ_G0036982.1 mouse_genomes_project 11 109051105 109051212 + Gm22061 snRNA snRNA MGP_CBAJ_T0033147.1 MGP_CBAJ_G0019119.1 mouse_genomes_project 11 128233677 128307313 - MGP_CBAJ_P0033147 Grb2 protein_coding protein_coding MGP_CBAJ_T0033148.1 MGP_CBAJ_G0019119.1 mouse_genomes_project 11 128233677 128307540 - MGP_CBAJ_P0033148 Grb2 protein_coding protein_coding MGP_CBAJ_T0033149.1 MGP_CBAJ_G0019119.1 mouse_genomes_project 11 128233677 128318205 - MGP_CBAJ_P0033149 Grb2 protein_coding protein_coding MGP_CBAJ_T0033150.1 MGP_CBAJ_G0019119.1 mouse_genomes_project 11 128234282 128318184 - MGP_CBAJ_P0033150 Grb2 protein_coding protein_coding MGP_CBAJ_T0033151.1 MGP_CBAJ_G0019119.1 mouse_genomes_project 11 128241860 128307934 - MGP_CBAJ_P0033151 Grb2 protein_coding protein_coding MGP_CBAJ_T0099936.1 MGP_CBAJ_G0038191.1 mouse_genomes_project 11 77272712 77272983 - snoRNA snoRNA MGP_CBAJ_T0003060.1 MGP_CBAJ_G0002844.1 mouse_genomes_project 11 23526654 23527583 + Gm12061 antisense antisense MGP_CBAJ_T0003150.1 MGP_CBAJ_G0002922.1 mouse_genomes_project 11 75498561 75508420 + Tnfsf13os antisense antisense MGP_CBAJ_T0003151.1 MGP_CBAJ_G0002922.1 mouse_genomes_project 11 75500752 75508797 + Tnfsf13os antisense antisense MGP_CBAJ_T0003152.1 MGP_CBAJ_G0002922.1 mouse_genomes_project 11 75500924 75508797 + Tnfsf13os antisense antisense MGP_CBAJ_T0031608.1 MGP_CBAJ_G0018745.1 mouse_genomes_project 11 106681045 106695085 + MGP_CBAJ_P0031608 Sp6 protein_coding protein_coding MGP_CBAJ_T0031609.1 MGP_CBAJ_G0018745.1 mouse_genomes_project 11 106686305 106695082 + MGP_CBAJ_P0031609 Sp6 protein_coding protein_coding MGP_CBAJ_T0098729.1 MGP_CBAJ_G0036984.1 mouse_genomes_project 11 112221447 112221734 + Gm23849 snRNA snRNA MGP_CBAJ_T0032960.1 MGP_CBAJ_G0019079.1 mouse_genomes_project 11 127104767 127144307 + MGP_CBAJ_P0032960 Dnaic2 protein_coding unknown_likely_coding MGP_CBAJ_T0032961.1 MGP_CBAJ_G0019079.1 mouse_genomes_project 11 127104810 127132251 + Dnaic2 protein_coding processed_transcript MGP_CBAJ_T0032962.1 MGP_CBAJ_G0019079.1 mouse_genomes_project 11 127104814 127144925 + MGP_CBAJ_P0032962 Dnaic2 protein_coding protein_coding MGP_CBAJ_T0032963.1 MGP_CBAJ_G0019079.1 mouse_genomes_project 11 127104818 127141392 + Dnaic2 protein_coding processed_transcript MGP_CBAJ_T0032964.1 MGP_CBAJ_G0019079.1 mouse_genomes_project 11 127106518 127144925 + MGP_CBAJ_P0032964 Dnaic2 protein_coding protein_coding MGP_CBAJ_T0032965.1 MGP_CBAJ_G0019079.1 mouse_genomes_project 11 127110301 127141502 + MGP_CBAJ_P0032965 Dnaic2 protein_coding protein_coding MGP_CBAJ_T0032966.1 MGP_CBAJ_G0019079.1 mouse_genomes_project 11 127119532 127141109 + Dnaic2 protein_coding processed_transcript MGP_CBAJ_T0032967.1 MGP_CBAJ_G0019079.1 mouse_genomes_project 11 127139715 127144198 + Dnaic2 protein_coding processed_transcript MGP_CBAJ_T0016997.1 MGP_CBAJ_G0014946.1 mouse_genomes_project 11 108727082 108727577 - Gm12356 processed_transcript processed_transcript MGP_CBAJ_T0031259.1 MGP_CBAJ_G0018656.1 mouse_genomes_project 11 97572534 97610344 - MGP_CBAJ_P0031259 Dgke protein_coding protein_coding MGP_CBAJ_T0031260.1 MGP_CBAJ_G0018656.1 mouse_genomes_project 11 97574882 97604271 - MGP_CBAJ_P0031260 Dgke protein_coding protein_coding MGP_CBAJ_T0031261.1 MGP_CBAJ_G0018656.1 mouse_genomes_project 11 97576546 97604271 - MGP_CBAJ_P0031261 Dgke protein_coding nonsense_mediated_decay MGP_CBAJ_T0006148.1 MGP_CBAJ_G0005129.1 mouse_genomes_project 11 54378204 54416186 - lincRNA lincRNA MGP_CBAJ_T0101022.1 MGP_CBAJ_G0039259.1 mouse_genomes_project 11 4330380 4345491 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101023.1 MGP_CBAJ_G0039259.1 mouse_genomes_project 11 4330606 4331072 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101024.1 MGP_CBAJ_G0039259.1 mouse_genomes_project 11 4331376 4343953 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101025.1 MGP_CBAJ_G0039259.1 mouse_genomes_project 11 4331649 4345468 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0032900.1 MGP_CBAJ_G0019065.1 mouse_genomes_project 11 122322744 122459495 + MGP_CBAJ_P0032900 Map2k6 protein_coding protein_coding MGP_CBAJ_T0032901.1 MGP_CBAJ_G0019065.1 mouse_genomes_project 11 122322744 122471375 + MGP_CBAJ_P0032901 Map2k6 protein_coding protein_coding MGP_CBAJ_T0032902.1 MGP_CBAJ_G0019065.1 mouse_genomes_project 11 122322881 122459495 + Map2k6 protein_coding processed_transcript MGP_CBAJ_T0032903.1 MGP_CBAJ_G0019065.1 mouse_genomes_project 11 122418161 122443578 + Map2k6 protein_coding processed_transcript MGP_CBAJ_T0032904.1 MGP_CBAJ_G0019065.1 mouse_genomes_project 11 122421906 122441983 + Map2k6 protein_coding processed_transcript MGP_CBAJ_T0032905.1 MGP_CBAJ_G0019065.1 mouse_genomes_project 11 122422051 122458721 + MGP_CBAJ_P0032905 Map2k6 protein_coding unknown_likely_coding MGP_CBAJ_T0032906.1 MGP_CBAJ_G0019065.1 mouse_genomes_project 11 122422057 122458721 + MGP_CBAJ_P0032906 Map2k6 protein_coding unknown_likely_coding MGP_CBAJ_T0029897.1 MGP_CBAJ_G0018316.1 mouse_genomes_project 11 76255119 76262146 - MGP_CBAJ_P0029897 Alox12e protein_coding protein_coding MGP_CBAJ_T0029898.1 MGP_CBAJ_G0018316.1 mouse_genomes_project 11 76259488 76261095 - Alox12e protein_coding retained_intron MGP_CBAJ_T0029899.1 MGP_CBAJ_G0018316.1 mouse_genomes_project 11 76260511 76261372 - Alox12e protein_coding retained_intron MGP_CBAJ_T0029900.1 MGP_CBAJ_G0018316.1 mouse_genomes_project 11 76260572 76261966 - Alox12e protein_coding retained_intron MGP_CBAJ_T0003270.1 MGP_CBAJ_G0003017.1 mouse_genomes_project 11 127979058 127980468 - Gm11695 antisense antisense MGP_CBAJ_T0006096.1 MGP_CBAJ_G0005084.1 mouse_genomes_project 11 21932311 21940624 + Gm12051 lincRNA lincRNA MGP_CBAJ_T0032092.1 MGP_CBAJ_G0018896.1 mouse_genomes_project 11 111560080 111567451 + MGP_CBAJ_P0032092 Naglu protein_coding protein_coding MGP_CBAJ_T0032093.1 MGP_CBAJ_G0018896.1 mouse_genomes_project 11 111561620 111566350 + Naglu protein_coding processed_transcript MGP_CBAJ_T0032094.1 MGP_CBAJ_G0018896.1 mouse_genomes_project 11 111562025 111566585 + Naglu protein_coding processed_transcript MGP_CBAJ_T0030736.1 MGP_CBAJ_G0018520.1 mouse_genomes_project 11 86471036 86471775 - MGP_CBAJ_P0030736 Gm9964 protein_coding protein_coding MGP_CBAJ_T0030895.1 MGP_CBAJ_G0018563.1 mouse_genomes_project 11 90614307 90625718 - MGP_CBAJ_P0030895 protein_coding protein_coding MGP_CBAJ_T0033258.1 MGP_CBAJ_G0019138.1 mouse_genomes_project 11 128803862 128829386 - Fbf1 protein_coding processed_transcript MGP_CBAJ_T0033259.1 MGP_CBAJ_G0019138.1 mouse_genomes_project 11 128803862 128808718 - Fbf1 protein_coding processed_transcript MGP_CBAJ_T0033260.1 MGP_CBAJ_G0019138.1 mouse_genomes_project 11 128803862 128829759 - MGP_CBAJ_P0033260 Fbf1 protein_coding protein_coding MGP_CBAJ_T0033261.1 MGP_CBAJ_G0019138.1 mouse_genomes_project 11 128803863 128827520 - MGP_CBAJ_P0033261 Fbf1 protein_coding protein_coding MGP_CBAJ_T0033262.1 MGP_CBAJ_G0019138.1 mouse_genomes_project 11 128804819 128812365 - Fbf1 protein_coding processed_transcript MGP_CBAJ_T0033263.1 MGP_CBAJ_G0019138.1 mouse_genomes_project 11 128816286 128819058 - Fbf1 protein_coding processed_transcript MGP_CBAJ_T0033264.1 MGP_CBAJ_G0019138.1 mouse_genomes_project 11 128816317 128820457 - Fbf1 protein_coding processed_transcript MGP_CBAJ_T0033265.1 MGP_CBAJ_G0019138.1 mouse_genomes_project 11 128816653 128829760 - MGP_CBAJ_P0033265 Fbf1 protein_coding protein_coding MGP_CBAJ_T0033266.1 MGP_CBAJ_G0019138.1 mouse_genomes_project 11 128817544 128827489 - Fbf1 protein_coding processed_transcript MGP_CBAJ_T0033267.1 MGP_CBAJ_G0019138.1 mouse_genomes_project 11 128824934 128829772 - Fbf1 protein_coding processed_transcript MGP_CBAJ_T0033268.1 MGP_CBAJ_G0019138.1 mouse_genomes_project 11 128826285 128829754 - MGP_CBAJ_P0033268 Fbf1 protein_coding protein_coding MGP_CBAJ_T0033269.1 MGP_CBAJ_G0019138.1 mouse_genomes_project 11 128827388 128829371 - Fbf1 protein_coding retained_intron MGP_CBAJ_T0028642.1 MGP_CBAJ_G0018003.1 mouse_genomes_project 11 55088552 55138096 - MGP_CBAJ_P0028642 Jade2 protein_coding protein_coding MGP_CBAJ_T0028643.1 MGP_CBAJ_G0018003.1 mouse_genomes_project 11 55117378 55138170 - Jade2 protein_coding processed_transcript MGP_CBAJ_T0027580.1 MGP_CBAJ_G0017730.1 mouse_genomes_project 11 2975967 2982741 + MGP_CBAJ_P0027580 Xbp1 protein_coding protein_coding MGP_CBAJ_T0027581.1 MGP_CBAJ_G0017730.1 mouse_genomes_project 11 2976313 2980874 + Xbp1 protein_coding retained_intron MGP_CBAJ_T0027582.1 MGP_CBAJ_G0017730.1 mouse_genomes_project 11 2976971 2981791 + MGP_CBAJ_P0027582 Xbp1 protein_coding protein_coding MGP_CBAJ_T0027583.1 MGP_CBAJ_G0017730.1 mouse_genomes_project 11 2977231 2981953 + MGP_CBAJ_P0027583 Xbp1 protein_coding protein_coding MGP_CBAJ_T0028480.1 MGP_CBAJ_G0017964.1 mouse_genomes_project 11 52787104 52826732 + MGP_CBAJ_P0028480 Mapk9 protein_coding protein_coding MGP_CBAJ_T0028481.1 MGP_CBAJ_G0017964.1 mouse_genomes_project 11 52787104 52826732 + MGP_CBAJ_P0028481 Mapk9 protein_coding protein_coding MGP_CBAJ_T0028482.1 MGP_CBAJ_G0017964.1 mouse_genomes_project 11 52787104 52826732 + MGP_CBAJ_P0028482 Mapk9 protein_coding protein_coding MGP_CBAJ_T0028483.1 MGP_CBAJ_G0017964.1 mouse_genomes_project 11 52787106 52826732 + MGP_CBAJ_P0028483 Mapk9 protein_coding protein_coding MGP_CBAJ_T0028484.1 MGP_CBAJ_G0017964.1 mouse_genomes_project 11 52787124 52816002 + Mapk9 protein_coding processed_transcript MGP_CBAJ_T0028485.1 MGP_CBAJ_G0017964.1 mouse_genomes_project 11 52787246 52813773 + Mapk9 protein_coding processed_transcript MGP_CBAJ_T0028486.1 MGP_CBAJ_G0017964.1 mouse_genomes_project 11 52794564 52826722 + MGP_CBAJ_P0028486 Mapk9 protein_coding protein_coding MGP_CBAJ_T0028487.1 MGP_CBAJ_G0017964.1 mouse_genomes_project 11 52794581 52814701 + Mapk9 protein_coding processed_transcript MGP_CBAJ_T0028488.1 MGP_CBAJ_G0017964.1 mouse_genomes_project 11 52794608 52823621 + MGP_CBAJ_P0028488 Mapk9 protein_coding protein_coding MGP_CBAJ_T0028489.1 MGP_CBAJ_G0017964.1 mouse_genomes_project 11 52794608 52823621 + MGP_CBAJ_P0028489 Mapk9 protein_coding protein_coding MGP_CBAJ_T0003068.1 MGP_CBAJ_G0002851.1 mouse_genomes_project 11 34676813 34684177 + Gm12120 antisense antisense MGP_CBAJ_T0027414.1 MGP_CBAJ_G0017693.1 mouse_genomes_project 11 1072596 1084339 - MGP_CBAJ_P0027414 4921536K21Rik protein_coding protein_coding MGP_CBAJ_T0098263.1 MGP_CBAJ_G0036535.1 mouse_genomes_project 11 95904805 95911516 + sense_intronic sense_intronic MGP_CBAJ_T0098264.1 MGP_CBAJ_G0036535.1 mouse_genomes_project 11 95905532 95911174 + sense_intronic sense_intronic MGP_CBAJ_T0028865.1 MGP_CBAJ_G0018059.1 mouse_genomes_project 11 59414821 59526352 - MGP_CBAJ_P0028865 Glra1 protein_coding protein_coding MGP_CBAJ_T0028866.1 MGP_CBAJ_G0018059.1 mouse_genomes_project 11 59414821 59526264 - MGP_CBAJ_P0028866 Glra1 protein_coding protein_coding MGP_CBAJ_T0028867.1 MGP_CBAJ_G0018059.1 mouse_genomes_project 11 59414821 59526729 - MGP_CBAJ_P0028867 Glra1 protein_coding protein_coding MGP_CBAJ_T0012551.1 MGP_CBAJ_G0010663.1 mouse_genomes_project 11 96198889 96199062 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003098.1 MGP_CBAJ_G0002879.1 mouse_genomes_project 11 58991847 58994811 + Slc36a3os antisense antisense MGP_CBAJ_T0011177.1 MGP_CBAJ_G0009315.1 mouse_genomes_project 11 64580747 64580874 + Gm27511 misc_RNA misc_RNA MGP_CBAJ_T0032549.1 MGP_CBAJ_G0018987.1 mouse_genomes_project 11 114647809 114668709 - MGP_CBAJ_P0032549 Gosr2 protein_coding protein_coding MGP_CBAJ_T0032550.1 MGP_CBAJ_G0018987.1 mouse_genomes_project 11 114649537 114668505 - MGP_CBAJ_P0032550 Gosr2 protein_coding protein_coding MGP_CBAJ_T0032551.1 MGP_CBAJ_G0018987.1 mouse_genomes_project 11 114649744 114668509 - Gosr2 protein_coding processed_transcript MGP_CBAJ_T0032055.1 MGP_CBAJ_G0018890.1 mouse_genomes_project 11 111204831 111212939 - MGP_CBAJ_P0032055 Ghdc protein_coding protein_coding MGP_CBAJ_T0032056.1 MGP_CBAJ_G0018890.1 mouse_genomes_project 11 111205702 111210686 - Ghdc protein_coding processed_transcript MGP_CBAJ_T0032057.1 MGP_CBAJ_G0018890.1 mouse_genomes_project 11 111211664 111212924 - MGP_CBAJ_P0032057 Ghdc protein_coding protein_coding MGP_CBAJ_T0012527.1 MGP_CBAJ_G0010639.1 mouse_genomes_project 11 85670679 85670961 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0029349.1 MGP_CBAJ_G0018190.1 mouse_genomes_project 11 67666542 67690629 + MGP_CBAJ_P0029349 Trim16 protein_coding protein_coding MGP_CBAJ_T0029350.1 MGP_CBAJ_G0018190.1 mouse_genomes_project 11 67666564 67704220 + MGP_CBAJ_P0029350 Trim16 protein_coding protein_coding MGP_CBAJ_T0029351.1 MGP_CBAJ_G0018190.1 mouse_genomes_project 11 67666751 67667560 + Trim16 protein_coding processed_transcript MGP_CBAJ_T0029352.1 MGP_CBAJ_G0018190.1 mouse_genomes_project 11 67666780 67690629 + MGP_CBAJ_P0029352 Trim16 protein_coding protein_coding MGP_CBAJ_T0029353.1 MGP_CBAJ_G0018190.1 mouse_genomes_project 11 67681454 67689111 + Trim16 protein_coding processed_transcript MGP_CBAJ_T0030150.1 MGP_CBAJ_G0018369.1 mouse_genomes_project 11 78922173 78963094 + Ankfy1 protein_coding retained_intron MGP_CBAJ_T0030151.1 MGP_CBAJ_G0018369.1 mouse_genomes_project 11 78922173 79016988 + MGP_CBAJ_P0030151 Ankfy1 protein_coding protein_coding MGP_CBAJ_T0030152.1 MGP_CBAJ_G0018369.1 mouse_genomes_project 11 78922173 79016109 + MGP_CBAJ_P0030152 Ankfy1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030153.1 MGP_CBAJ_G0018369.1 mouse_genomes_project 11 78947164 79012476 + Ankfy1 protein_coding processed_transcript MGP_CBAJ_T0030154.1 MGP_CBAJ_G0018369.1 mouse_genomes_project 11 79001536 79002511 + Ankfy1 protein_coding retained_intron MGP_CBAJ_T0030155.1 MGP_CBAJ_G0018369.1 mouse_genomes_project 11 79006087 79012641 + Ankfy1 protein_coding retained_intron MGP_CBAJ_T0030469.1 MGP_CBAJ_G0018460.1 mouse_genomes_project 11 83461702 83486256 + MGP_CBAJ_P0030469 Tusc5 protein_coding protein_coding MGP_CBAJ_T0099952.1 MGP_CBAJ_G0038207.1 mouse_genomes_project 11 101927866 101928009 + Gm25113 snoRNA snoRNA MGP_CBAJ_T0027969.1 MGP_CBAJ_G0017824.1 mouse_genomes_project 11 23717422 23821539 + MGP_CBAJ_P0027969 Bcl11a protein_coding unknown_likely_coding MGP_CBAJ_T0027970.1 MGP_CBAJ_G0017824.1 mouse_genomes_project 11 23720349 23832582 + MGP_CBAJ_P0027970 Bcl11a protein_coding protein_coding MGP_CBAJ_T0027971.1 MGP_CBAJ_G0017824.1 mouse_genomes_project 11 23720410 23833511 + MGP_CBAJ_P0027971 Bcl11a protein_coding protein_coding MGP_CBAJ_T0027972.1 MGP_CBAJ_G0017824.1 mouse_genomes_project 11 23720440 23735482 + Bcl11a protein_coding retained_intron MGP_CBAJ_T0027973.1 MGP_CBAJ_G0017824.1 mouse_genomes_project 11 23722963 23832946 + MGP_CBAJ_P0027973 Bcl11a protein_coding protein_coding MGP_CBAJ_T0027974.1 MGP_CBAJ_G0017824.1 mouse_genomes_project 11 23798718 23819664 + Bcl11a protein_coding processed_transcript MGP_CBAJ_T0012441.1 MGP_CBAJ_G0010553.1 mouse_genomes_project 11 52716941 52717320 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101549.1 MGP_CBAJ_G0039581.1 mouse_genomes_project 11 80731682 80732623 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0028760.1 MGP_CBAJ_G0018034.1 mouse_genomes_project 11 57527948 57673157 - MGP_CBAJ_P0028760 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032741.1 MGP_CBAJ_G0019032.1 mouse_genomes_project 11 118207085 118218390 - MGP_CBAJ_P0032741 Polg2 protein_coding protein_coding MGP_CBAJ_T0032742.1 MGP_CBAJ_G0019032.1 mouse_genomes_project 11 118207085 118218412 - MGP_CBAJ_P0032742 Polg2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032743.1 MGP_CBAJ_G0019032.1 mouse_genomes_project 11 118207565 118218348 - MGP_CBAJ_P0032743 Polg2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032744.1 MGP_CBAJ_G0019032.1 mouse_genomes_project 11 118209876 118218348 - MGP_CBAJ_P0032744 Polg2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032745.1 MGP_CBAJ_G0019032.1 mouse_genomes_project 11 118211474 118212683 - Polg2 protein_coding retained_intron MGP_CBAJ_T0032746.1 MGP_CBAJ_G0019032.1 mouse_genomes_project 11 118214347 118218377 - MGP_CBAJ_P0032746 Polg2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012313.1 MGP_CBAJ_G0010425.1 mouse_genomes_project 11 1349769 1350239 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0027822.1 MGP_CBAJ_G0017790.1 mouse_genomes_project 11 17780115 17932352 - MGP_CBAJ_P0027822 Meis1 protein_coding protein_coding MGP_CBAJ_T0027823.1 MGP_CBAJ_G0017790.1 mouse_genomes_project 11 17780726 17932336 - MGP_CBAJ_P0027823 Meis1 protein_coding protein_coding MGP_CBAJ_T0027824.1 MGP_CBAJ_G0017790.1 mouse_genomes_project 11 17780726 17932081 - MGP_CBAJ_P0027824 Meis1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027825.1 MGP_CBAJ_G0017790.1 mouse_genomes_project 11 17780965 17925362 - Meis1 protein_coding processed_transcript MGP_CBAJ_T0027826.1 MGP_CBAJ_G0017790.1 mouse_genomes_project 11 17780966 17931598 - MGP_CBAJ_P0027826 Meis1 protein_coding protein_coding MGP_CBAJ_T0027827.1 MGP_CBAJ_G0017790.1 mouse_genomes_project 11 17781633 17929646 - MGP_CBAJ_P0027827 Meis1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027828.1 MGP_CBAJ_G0017790.1 mouse_genomes_project 11 17900178 17932289 - Meis1 protein_coding retained_intron MGP_CBAJ_T0027829.1 MGP_CBAJ_G0017790.1 mouse_genomes_project 11 17923155 17932289 - Meis1 protein_coding retained_intron MGP_CBAJ_T0029587.1 MGP_CBAJ_G0018246.1 mouse_genomes_project 11 74849916 74852452 - MGP_CBAJ_P0029587 9130213A22Rik protein_coding protein_coding MGP_CBAJ_T0033171.1 MGP_CBAJ_G0019123.1 mouse_genomes_project 11 128442787 128479638 + MGP_CBAJ_P0033171 Llgl2 protein_coding protein_coding MGP_CBAJ_T0033172.1 MGP_CBAJ_G0019123.1 mouse_genomes_project 11 128442796 128479636 + MGP_CBAJ_P0033172 Llgl2 protein_coding protein_coding MGP_CBAJ_T0033173.1 MGP_CBAJ_G0019123.1 mouse_genomes_project 11 128442796 128464254 + MGP_CBAJ_P0033173 Llgl2 protein_coding protein_coding MGP_CBAJ_T0033174.1 MGP_CBAJ_G0019123.1 mouse_genomes_project 11 128450747 128463696 + MGP_CBAJ_P0033174 Llgl2 protein_coding protein_coding MGP_CBAJ_T0033175.1 MGP_CBAJ_G0019123.1 mouse_genomes_project 11 128452704 128464201 + MGP_CBAJ_P0033175 Llgl2 protein_coding protein_coding MGP_CBAJ_T0033176.1 MGP_CBAJ_G0019123.1 mouse_genomes_project 11 128453093 128464261 + MGP_CBAJ_P0033176 Llgl2 protein_coding protein_coding MGP_CBAJ_T0033177.1 MGP_CBAJ_G0019123.1 mouse_genomes_project 11 128453102 128464289 + MGP_CBAJ_P0033177 Llgl2 protein_coding protein_coding MGP_CBAJ_T0033178.1 MGP_CBAJ_G0019123.1 mouse_genomes_project 11 128477109 128478177 + Llgl2 protein_coding retained_intron MGP_CBAJ_T0033179.1 MGP_CBAJ_G0019123.1 mouse_genomes_project 11 128477593 128478716 + Llgl2 protein_coding processed_transcript MGP_CBAJ_T0033180.1 MGP_CBAJ_G0019123.1 mouse_genomes_project 11 128477660 128479638 + MGP_CBAJ_P0033180 Llgl2 protein_coding protein_coding MGP_CBAJ_T0033181.1 MGP_CBAJ_G0019123.1 mouse_genomes_project 11 128478089 128479442 + Llgl2 protein_coding retained_intron MGP_CBAJ_T0033182.1 MGP_CBAJ_G0019123.1 mouse_genomes_project 11 128478890 128479638 + Llgl2 protein_coding retained_intron MGP_CBAJ_T0030160.1 MGP_CBAJ_G0018371.1 mouse_genomes_project 11 79041859 79106651 + Zzef1 protein_coding retained_intron MGP_CBAJ_T0030161.1 MGP_CBAJ_G0018371.1 mouse_genomes_project 11 79041859 79183660 + MGP_CBAJ_P0030161 Zzef1 protein_coding protein_coding MGP_CBAJ_T0030162.1 MGP_CBAJ_G0018371.1 mouse_genomes_project 11 79041887 79183658 + MGP_CBAJ_P0030162 Zzef1 protein_coding protein_coding MGP_CBAJ_T0030163.1 MGP_CBAJ_G0018371.1 mouse_genomes_project 11 79090993 79174429 + MGP_CBAJ_P0030163 Zzef1 protein_coding unknown_likely_coding MGP_CBAJ_T0030164.1 MGP_CBAJ_G0018371.1 mouse_genomes_project 11 79098466 79106016 + Zzef1 protein_coding processed_transcript MGP_CBAJ_T0030165.1 MGP_CBAJ_G0018371.1 mouse_genomes_project 11 79168851 79182357 + Zzef1 protein_coding retained_intron MGP_CBAJ_T0030166.1 MGP_CBAJ_G0018371.1 mouse_genomes_project 11 79171498 79175443 + Zzef1 protein_coding retained_intron MGP_CBAJ_T0030167.1 MGP_CBAJ_G0018371.1 mouse_genomes_project 11 79177389 79183660 + Zzef1 protein_coding retained_intron MGP_CBAJ_T0032484.1 MGP_CBAJ_G0018973.1 mouse_genomes_project 11 113908945 113928984 + Nmt1 protein_coding processed_transcript MGP_CBAJ_T0032485.1 MGP_CBAJ_G0018973.1 mouse_genomes_project 11 113909101 113965143 + MGP_CBAJ_P0032485 Nmt1 protein_coding protein_coding MGP_CBAJ_T0032486.1 MGP_CBAJ_G0018973.1 mouse_genomes_project 11 113909340 113944830 + Nmt1 protein_coding processed_transcript MGP_CBAJ_T0028855.1 MGP_CBAJ_G0018056.1 mouse_genomes_project 11 59276475 59309488 - MGP_CBAJ_P0028855 Sparc protein_coding protein_coding MGP_CBAJ_T0028856.1 MGP_CBAJ_G0018056.1 mouse_genomes_project 11 59276475 59309670 - MGP_CBAJ_P0028856 Sparc protein_coding protein_coding MGP_CBAJ_T0028857.1 MGP_CBAJ_G0018056.1 mouse_genomes_project 11 59277358 59281644 - Sparc protein_coding processed_transcript MGP_CBAJ_T0028858.1 MGP_CBAJ_G0018056.1 mouse_genomes_project 11 59277491 59285911 - Sparc protein_coding processed_transcript MGP_CBAJ_T0028859.1 MGP_CBAJ_G0018056.1 mouse_genomes_project 11 59281321 59309488 - MGP_CBAJ_P0028859 Sparc protein_coding protein_coding MGP_CBAJ_T0028860.1 MGP_CBAJ_G0018056.1 mouse_genomes_project 11 59297566 59309490 - Sparc protein_coding processed_transcript MGP_CBAJ_T0016954.1 MGP_CBAJ_G0014922.1 mouse_genomes_project 11 78413286 78415441 + 1700051A21Rik processed_transcript processed_transcript MGP_CBAJ_T0016955.1 MGP_CBAJ_G0014922.1 mouse_genomes_project 11 78413709 78415423 + 1700051A21Rik processed_transcript processed_transcript MGP_CBAJ_T0033353.1 MGP_CBAJ_G0019155.1 mouse_genomes_project 11 129410685 129426293 + MGP_CBAJ_P0033353 protein_coding protein_coding MGP_CBAJ_T0033354.1 MGP_CBAJ_G0019155.1 mouse_genomes_project 11 129410685 129425998 + MGP_CBAJ_P0033354 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033355.1 MGP_CBAJ_G0019155.1 mouse_genomes_project 11 129411006 129426295 + MGP_CBAJ_P0033355 protein_coding protein_coding MGP_CBAJ_T0033356.1 MGP_CBAJ_G0019155.1 mouse_genomes_project 11 129415375 129426293 + MGP_CBAJ_P0033356 protein_coding protein_coding MGP_CBAJ_T0033357.1 MGP_CBAJ_G0019155.1 mouse_genomes_project 11 129415423 129418406 + protein_coding retained_intron MGP_CBAJ_T0003283.1 MGP_CBAJ_G0003029.1 mouse_genomes_project 11 133013384 133029043 - Rptoros antisense antisense MGP_CBAJ_T0030264.1 MGP_CBAJ_G0018415.1 mouse_genomes_project 11 80771666 80772715 - MGP_CBAJ_P0030264 Olfr411 protein_coding protein_coding MGP_CBAJ_T0030265.1 MGP_CBAJ_G0018415.1 mouse_genomes_project 11 80771934 80777653 - MGP_CBAJ_P0030265 Olfr411 protein_coding protein_coding MGP_CBAJ_T0030920.1 MGP_CBAJ_G0018572.1 mouse_genomes_project 11 91116249 91127286 - MGP_CBAJ_P0030920 Gas2l2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030921.1 MGP_CBAJ_G0018572.1 mouse_genomes_project 11 91116249 91127286 - MGP_CBAJ_P0030921 Gas2l2 protein_coding protein_coding MGP_CBAJ_T0012577.1 MGP_CBAJ_G0010689.1 mouse_genomes_project 11 111839898 111840537 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012306.1 MGP_CBAJ_G0010418.1 mouse_genomes_project 11 265886 266338 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0028610.1 MGP_CBAJ_G0017994.1 mouse_genomes_project 11 54823187 54846529 + MGP_CBAJ_P0028610 Phykpl protein_coding protein_coding MGP_CBAJ_T0028611.1 MGP_CBAJ_G0017994.1 mouse_genomes_project 11 54823187 54845294 + MGP_CBAJ_P0028611 Phykpl protein_coding nonsense_mediated_decay MGP_CBAJ_T0028612.1 MGP_CBAJ_G0017994.1 mouse_genomes_project 11 54823219 54843368 + MGP_CBAJ_P0028612 Phykpl protein_coding protein_coding MGP_CBAJ_T0028613.1 MGP_CBAJ_G0017994.1 mouse_genomes_project 11 54823233 54839050 + Phykpl protein_coding retained_intron MGP_CBAJ_T0028614.1 MGP_CBAJ_G0017994.1 mouse_genomes_project 11 54823237 54825748 + Phykpl protein_coding retained_intron MGP_CBAJ_T0028615.1 MGP_CBAJ_G0017994.1 mouse_genomes_project 11 54823241 54831732 + Phykpl protein_coding retained_intron MGP_CBAJ_T0028616.1 MGP_CBAJ_G0017994.1 mouse_genomes_project 11 54829872 54832307 + Phykpl protein_coding retained_intron MGP_CBAJ_T0028617.1 MGP_CBAJ_G0017994.1 mouse_genomes_project 11 54841306 54843107 + Phykpl protein_coding retained_intron MGP_CBAJ_T0033348.1 MGP_CBAJ_G0019153.1 mouse_genomes_project 11 129348679 129375324 - MGP_CBAJ_P0033348 Rhbdf2 protein_coding protein_coding MGP_CBAJ_T0033349.1 MGP_CBAJ_G0019153.1 mouse_genomes_project 11 129348683 129378162 - MGP_CBAJ_P0033349 Rhbdf2 protein_coding protein_coding MGP_CBAJ_T0033350.1 MGP_CBAJ_G0019153.1 mouse_genomes_project 11 129351600 129353115 - Rhbdf2 protein_coding processed_transcript MGP_CBAJ_T0033351.1 MGP_CBAJ_G0019153.1 mouse_genomes_project 11 129353772 129375371 - Rhbdf2 protein_coding retained_intron MGP_CBAJ_T0006233.1 MGP_CBAJ_G0005193.1 mouse_genomes_project 11 105115860 105117810 - Gm9796 lincRNA lincRNA MGP_CBAJ_T0033683.1 MGP_CBAJ_G0019222.1 mouse_genomes_project 11 133740624 133746664 + MGP_CBAJ_P0033683 Ccdc137 protein_coding protein_coding MGP_CBAJ_T0033684.1 MGP_CBAJ_G0019222.1 mouse_genomes_project 11 133740635 133741879 + Ccdc137 protein_coding processed_transcript MGP_CBAJ_T0033685.1 MGP_CBAJ_G0019222.1 mouse_genomes_project 11 133740647 133741355 + Ccdc137 protein_coding retained_intron MGP_CBAJ_T0033686.1 MGP_CBAJ_G0019222.1 mouse_genomes_project 11 133740651 133742621 + MGP_CBAJ_P0033686 Ccdc137 protein_coding protein_coding MGP_CBAJ_T0033687.1 MGP_CBAJ_G0019222.1 mouse_genomes_project 11 133740656 133744722 + MGP_CBAJ_P0033687 Ccdc137 protein_coding protein_coding MGP_CBAJ_T0033688.1 MGP_CBAJ_G0019222.1 mouse_genomes_project 11 133740695 133742514 + Ccdc137 protein_coding processed_transcript MGP_CBAJ_T0033689.1 MGP_CBAJ_G0019222.1 mouse_genomes_project 11 133742310 133744838 + Ccdc137 protein_coding retained_intron MGP_CBAJ_T0033690.1 MGP_CBAJ_G0019222.1 mouse_genomes_project 11 133744771 133746663 + Ccdc137 protein_coding processed_transcript MGP_CBAJ_T0028365.1 MGP_CBAJ_G0017922.1 mouse_genomes_project 11 48911862 48940080 + MGP_CBAJ_P0028365 Havcr2 protein_coding protein_coding MGP_CBAJ_T0028366.1 MGP_CBAJ_G0017922.1 mouse_genomes_project 11 48911896 48940071 + MGP_CBAJ_P0028366 Havcr2 protein_coding protein_coding MGP_CBAJ_T0027729.1 MGP_CBAJ_G0017769.1 mouse_genomes_project 11 7076664 7095796 + MGP_CBAJ_P0027729 protein_coding protein_coding MGP_CBAJ_T0027730.1 MGP_CBAJ_G0017769.1 mouse_genomes_project 11 7076967 7094389 + MGP_CBAJ_P0027730 protein_coding protein_coding MGP_CBAJ_T0027731.1 MGP_CBAJ_G0017769.1 mouse_genomes_project 11 7077046 7078093 + protein_coding retained_intron MGP_CBAJ_T0027732.1 MGP_CBAJ_G0017769.1 mouse_genomes_project 11 7077206 7094318 + MGP_CBAJ_P0027732 protein_coding protein_coding MGP_CBAJ_T0027733.1 MGP_CBAJ_G0017769.1 mouse_genomes_project 11 7077367 7097240 + MGP_CBAJ_P0027733 protein_coding unknown_likely_coding MGP_CBAJ_T0027734.1 MGP_CBAJ_G0017769.1 mouse_genomes_project 11 7087085 7095816 + MGP_CBAJ_P0027734 protein_coding protein_coding MGP_CBAJ_T0027735.1 MGP_CBAJ_G0017769.1 mouse_genomes_project 11 7094081 7097149 + protein_coding retained_intron MGP_CBAJ_T0099910.1 MGP_CBAJ_G0038165.1 mouse_genomes_project 11 22718752 22718861 - Gm24398 snoRNA snoRNA MGP_CBAJ_T0031437.1 MGP_CBAJ_G0018699.1 mouse_genomes_project 11 104324495 104340385 + MGP_CBAJ_P0031437 Ppp1r9b protein_coding protein_coding MGP_CBAJ_T0031438.1 MGP_CBAJ_G0018699.1 mouse_genomes_project 11 104326339 104334825 + Ppp1r9b protein_coding processed_transcript MGP_CBAJ_T0031439.1 MGP_CBAJ_G0018699.1 mouse_genomes_project 11 104329544 104340385 + MGP_CBAJ_P0031439 Ppp1r9b protein_coding protein_coding MGP_CBAJ_T0003133.1 MGP_CBAJ_G0002908.1 mouse_genomes_project 11 68971194 68975004 + 9630013K17Rik antisense antisense MGP_CBAJ_T0033592.1 MGP_CBAJ_G0019205.1 mouse_genomes_project 11 132787793 133015749 + Rptor protein_coding retained_intron MGP_CBAJ_T0033593.1 MGP_CBAJ_G0019205.1 mouse_genomes_project 11 132787883 132968129 + Rptor protein_coding retained_intron MGP_CBAJ_T0033594.1 MGP_CBAJ_G0019205.1 mouse_genomes_project 11 132787903 133039698 + Rptor protein_coding retained_intron MGP_CBAJ_T0033595.1 MGP_CBAJ_G0019205.1 mouse_genomes_project 11 132788037 133098512 + MGP_CBAJ_P0033595 Rptor protein_coding protein_coding MGP_CBAJ_T0033596.1 MGP_CBAJ_G0019205.1 mouse_genomes_project 11 132788586 133098681 + MGP_CBAJ_P0033596 Rptor protein_coding nonsense_mediated_decay MGP_CBAJ_T0033597.1 MGP_CBAJ_G0019205.1 mouse_genomes_project 11 132843426 133060264 + Rptor protein_coding retained_intron MGP_CBAJ_T0033598.1 MGP_CBAJ_G0019205.1 mouse_genomes_project 11 132984693 133041606 + MGP_CBAJ_P0033598 Rptor protein_coding nonsense_mediated_decay MGP_CBAJ_T0033599.1 MGP_CBAJ_G0019205.1 mouse_genomes_project 11 132997170 133063322 + Rptor protein_coding retained_intron MGP_CBAJ_T0033600.1 MGP_CBAJ_G0019205.1 mouse_genomes_project 11 133015519 133050916 + MGP_CBAJ_P0033600 Rptor protein_coding protein_coding MGP_CBAJ_T0033601.1 MGP_CBAJ_G0019205.1 mouse_genomes_project 11 133050876 133093854 + MGP_CBAJ_P0033601 Rptor protein_coding nonsense_mediated_decay MGP_CBAJ_T0033602.1 MGP_CBAJ_G0019205.1 mouse_genomes_project 11 133050926 133052420 + Rptor protein_coding retained_intron MGP_CBAJ_T0033603.1 MGP_CBAJ_G0019205.1 mouse_genomes_project 11 133052061 133080790 + MGP_CBAJ_P0033603 Rptor protein_coding nonsense_mediated_decay MGP_CBAJ_T0006154.1 MGP_CBAJ_G0005135.1 mouse_genomes_project 11 63161138 63162304 + Gm12259 lincRNA lincRNA MGP_CBAJ_T0031504.1 MGP_CBAJ_G0018717.1 mouse_genomes_project 11 105279482 105287993 + MGP_CBAJ_P0031504 Gngt2 protein_coding protein_coding MGP_CBAJ_T0031505.1 MGP_CBAJ_G0018717.1 mouse_genomes_project 11 105284537 105287993 + MGP_CBAJ_P0031505 Gngt2 protein_coding protein_coding MGP_CBAJ_T0031506.1 MGP_CBAJ_G0018717.1 mouse_genomes_project 11 105284551 105287993 + MGP_CBAJ_P0031506 Gngt2 protein_coding protein_coding MGP_CBAJ_T0031507.1 MGP_CBAJ_G0018717.1 mouse_genomes_project 11 105284903 105287993 + MGP_CBAJ_P0031507 Gngt2 protein_coding protein_coding MGP_CBAJ_T0031508.1 MGP_CBAJ_G0018717.1 mouse_genomes_project 11 105284905 105287993 + MGP_CBAJ_P0031508 Gngt2 protein_coding protein_coding MGP_CBAJ_T0031509.1 MGP_CBAJ_G0018717.1 mouse_genomes_project 11 105285477 105287993 + MGP_CBAJ_P0031509 Gngt2 protein_coding protein_coding MGP_CBAJ_T0031510.1 MGP_CBAJ_G0018717.1 mouse_genomes_project 11 105285854 105287993 + MGP_CBAJ_P0031510 Gngt2 protein_coding protein_coding MGP_CBAJ_T0006268.1 MGP_CBAJ_G0005218.1 mouse_genomes_project 11 126564794 126584057 - Gm11690 lincRNA lincRNA MGP_CBAJ_T0028909.1 MGP_CBAJ_G0018075.1 mouse_genomes_project 11 62542380 62549979 + MGP_CBAJ_P0028909 Zfp692 protein_coding protein_coding MGP_CBAJ_T0028910.1 MGP_CBAJ_G0018075.1 mouse_genomes_project 11 62542483 62549993 + MGP_CBAJ_P0028910 Zfp692 protein_coding protein_coding MGP_CBAJ_T0027536.1 MGP_CBAJ_G0017723.1 mouse_genomes_project 11 2435322 2450910 - Gas2l1 protein_coding processed_transcript MGP_CBAJ_T0027537.1 MGP_CBAJ_G0017723.1 mouse_genomes_project 11 2439008 2450916 - MGP_CBAJ_P0027537 Gas2l1 protein_coding protein_coding MGP_CBAJ_T0027540.1 MGP_CBAJ_G0017723.1 mouse_genomes_project 11 2445987 2450943 - MGP_CBAJ_P0027540 Gas2l1 protein_coding protein_coding MGP_CBAJ_T0027541.1 MGP_CBAJ_G0017723.1 mouse_genomes_project 11 2445996 2450893 - MGP_CBAJ_P0027541 Gas2l1 protein_coding protein_coding MGP_CBAJ_T0027542.1 MGP_CBAJ_G0017723.1 mouse_genomes_project 11 2446085 2450467 - Gas2l1 protein_coding processed_transcript MGP_CBAJ_T0027543.1 MGP_CBAJ_G0017723.1 mouse_genomes_project 11 2449488 2450894 - MGP_CBAJ_P0027543 Gas2l1 protein_coding protein_coding MGP_CBAJ_T0027544.1 MGP_CBAJ_G0017723.1 mouse_genomes_project 11 2450032 2450910 - Gas2l1 protein_coding processed_transcript MGP_CBAJ_T0006245.1 MGP_CBAJ_G0005201.1 mouse_genomes_project 11 112201231 112201793 + Gm11635 lincRNA lincRNA MGP_CBAJ_T0006246.1 MGP_CBAJ_G0005201.1 mouse_genomes_project 11 112201317 112206455 + Gm11635 lincRNA lincRNA MGP_CBAJ_T0029814.1 MGP_CBAJ_G0018300.1 mouse_genomes_project 11 75867345 75870924 + MGP_CBAJ_P0029814 Gabarap protein_coding protein_coding MGP_CBAJ_T0029815.1 MGP_CBAJ_G0018300.1 mouse_genomes_project 11 75867841 75870913 + MGP_CBAJ_P0029815 Gabarap protein_coding protein_coding MGP_CBAJ_T0029816.1 MGP_CBAJ_G0018300.1 mouse_genomes_project 11 75867886 75870908 + Gabarap protein_coding retained_intron MGP_CBAJ_T0029817.1 MGP_CBAJ_G0018300.1 mouse_genomes_project 11 75868009 75868804 + Gabarap protein_coding processed_transcript MGP_CBAJ_T0028008.1 MGP_CBAJ_G0017832.1 mouse_genomes_project 11 29427249 29487201 + MGP_CBAJ_P0028008 Smek2 protein_coding protein_coding MGP_CBAJ_T0028009.1 MGP_CBAJ_G0017832.1 mouse_genomes_project 11 29427249 29476005 + MGP_CBAJ_P0028009 Smek2 protein_coding protein_coding MGP_CBAJ_T0028010.1 MGP_CBAJ_G0017832.1 mouse_genomes_project 11 29428106 29444721 + MGP_CBAJ_P0028010 Smek2 protein_coding protein_coding MGP_CBAJ_T0028011.1 MGP_CBAJ_G0017832.1 mouse_genomes_project 11 29453623 29457625 + Smek2 protein_coding processed_transcript MGP_CBAJ_T0028012.1 MGP_CBAJ_G0017832.1 mouse_genomes_project 11 29453634 29468734 + MGP_CBAJ_P0028012 Smek2 protein_coding protein_coding MGP_CBAJ_T0028013.1 MGP_CBAJ_G0017832.1 mouse_genomes_project 11 29464843 29484960 + Smek2 protein_coding processed_transcript MGP_CBAJ_T0028014.1 MGP_CBAJ_G0017832.1 mouse_genomes_project 11 29480027 29487201 + MGP_CBAJ_P0028014 Smek2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0003097.1 MGP_CBAJ_G0002878.1 mouse_genomes_project 11 58611893 58619747 + Lyrm7os antisense antisense MGP_CBAJ_T0012350.1 MGP_CBAJ_G0010462.1 mouse_genomes_project 11 16141166 16142009 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031606.1 MGP_CBAJ_G0018744.1 mouse_genomes_project 11 106611076 106635347 - MGP_CBAJ_P0031606 Sp2 protein_coding protein_coding MGP_CBAJ_T0031607.1 MGP_CBAJ_G0018744.1 mouse_genomes_project 11 106612206 106635346 - MGP_CBAJ_P0031607 Sp2 protein_coding unknown_likely_coding MGP_CBAJ_T0030468.1 MGP_CBAJ_G0018459.1 mouse_genomes_project 11 83454741 83455948 + MGP_CBAJ_P0030468 Bhlha9 protein_coding protein_coding MGP_CBAJ_T0006252.1 MGP_CBAJ_G0005206.1 mouse_genomes_project 11 119060799 119079870 - C330019F10Rik lincRNA lincRNA MGP_CBAJ_T0006086.1 MGP_CBAJ_G0005075.1 mouse_genomes_project 11 17005869 17013258 + Gm12018 lincRNA lincRNA MGP_CBAJ_T0029313.1 MGP_CBAJ_G0018182.1 mouse_genomes_project 11 67339695 67348827 - MGP_CBAJ_P0029313 Cenpv protein_coding unknown_likely_coding MGP_CBAJ_T0029314.1 MGP_CBAJ_G0018182.1 mouse_genomes_project 11 67339699 67353993 - MGP_CBAJ_P0029314 Cenpv protein_coding protein_coding MGP_CBAJ_T0029315.1 MGP_CBAJ_G0018182.1 mouse_genomes_project 11 67339702 67342649 - Cenpv protein_coding retained_intron MGP_CBAJ_T0029316.1 MGP_CBAJ_G0018182.1 mouse_genomes_project 11 67339896 67353217 - Cenpv protein_coding processed_transcript MGP_CBAJ_T0029317.1 MGP_CBAJ_G0018182.1 mouse_genomes_project 11 67342245 67353361 - Cenpv protein_coding processed_transcript MGP_CBAJ_T0029318.1 MGP_CBAJ_G0018182.1 mouse_genomes_project 11 67348639 67353735 - MGP_CBAJ_P0029318 Cenpv protein_coding nonsense_mediated_decay MGP_CBAJ_T0029319.1 MGP_CBAJ_G0018182.1 mouse_genomes_project 11 67348870 67353735 - Cenpv protein_coding processed_transcript MGP_CBAJ_T0028928.1 MGP_CBAJ_G0018080.1 mouse_genomes_project 11 62692392 62701490 + MGP_CBAJ_P0028928 Gm12253 protein_coding protein_coding MGP_CBAJ_T0028348.1 MGP_CBAJ_G0017918.1 mouse_genomes_project 11 48663122 48667465 + MGP_CBAJ_P0028348 Fndc9 protein_coding protein_coding MGP_CBAJ_T0030749.1 MGP_CBAJ_G0018525.1 mouse_genomes_project 11 86731142 86735171 - MGP_CBAJ_P0030749 Evi2a protein_coding protein_coding MGP_CBAJ_T0030750.1 MGP_CBAJ_G0018525.1 mouse_genomes_project 11 86731150 86735192 - MGP_CBAJ_P0030750 Evi2a protein_coding protein_coding MGP_CBAJ_T0030751.1 MGP_CBAJ_G0018525.1 mouse_genomes_project 11 86731539 86732358 - MGP_CBAJ_P0030751 Evi2a protein_coding protein_coding MGP_CBAJ_T0030752.1 MGP_CBAJ_G0018525.1 mouse_genomes_project 11 86732267 86732729 - MGP_CBAJ_P0030752 Evi2a protein_coding protein_coding MGP_CBAJ_T0030753.1 MGP_CBAJ_G0018525.1 mouse_genomes_project 11 86732650 86735192 - Evi2a protein_coding processed_transcript MGP_CBAJ_T0029657.1 MGP_CBAJ_G0018265.1 mouse_genomes_project 11 75394323 75400417 - MGP_CBAJ_P0029657 Atp1b2 protein_coding protein_coding MGP_CBAJ_T0029658.1 MGP_CBAJ_G0018265.1 mouse_genomes_project 11 75394328 75400530 - Atp1b2 protein_coding processed_transcript MGP_CBAJ_T0029659.1 MGP_CBAJ_G0018265.1 mouse_genomes_project 11 75395253 75397329 - MGP_CBAJ_P0029659 Atp1b2 protein_coding protein_coding MGP_CBAJ_T0029660.1 MGP_CBAJ_G0018265.1 mouse_genomes_project 11 75395945 75398201 - Atp1b2 protein_coding processed_transcript MGP_CBAJ_T0029661.1 MGP_CBAJ_G0018265.1 mouse_genomes_project 11 75396731 75397750 - Atp1b2 protein_coding processed_transcript MGP_CBAJ_T0032203.1 MGP_CBAJ_G0018922.1 mouse_genomes_project 11 112012785 112016017 + MGP_CBAJ_P0032203 protein_coding protein_coding MGP_CBAJ_T0032204.1 MGP_CBAJ_G0018922.1 mouse_genomes_project 11 112012925 112014422 + protein_coding processed_transcript MGP_CBAJ_T0032205.1 MGP_CBAJ_G0018922.1 mouse_genomes_project 11 112012933 112016017 + MGP_CBAJ_P0032205 protein_coding protein_coding MGP_CBAJ_T0032206.1 MGP_CBAJ_G0018922.1 mouse_genomes_project 11 112014099 112016017 + MGP_CBAJ_P0032206 protein_coding protein_coding MGP_CBAJ_T0032207.1 MGP_CBAJ_G0018922.1 mouse_genomes_project 11 112015361 112016017 + protein_coding processed_transcript MGP_CBAJ_T0003185.1 MGP_CBAJ_G0002949.1 mouse_genomes_project 11 96744012 96751706 + Gm15893 antisense antisense MGP_CBAJ_T0032616.1 MGP_CBAJ_G0019003.1 mouse_genomes_project 11 116397165 116515332 + MGP_CBAJ_P0032616 Tlk2 protein_coding protein_coding MGP_CBAJ_T0032617.1 MGP_CBAJ_G0019003.1 mouse_genomes_project 11 116399104 116433325 + Tlk2 protein_coding retained_intron MGP_CBAJ_T0032618.1 MGP_CBAJ_G0019003.1 mouse_genomes_project 11 116399846 116513554 + MGP_CBAJ_P0032618 Tlk2 protein_coding protein_coding MGP_CBAJ_T0032619.1 MGP_CBAJ_G0019003.1 mouse_genomes_project 11 116399958 116505110 + MGP_CBAJ_P0032619 Tlk2 protein_coding protein_coding MGP_CBAJ_T0032620.1 MGP_CBAJ_G0019003.1 mouse_genomes_project 11 116400082 116513553 + MGP_CBAJ_P0032620 Tlk2 protein_coding protein_coding MGP_CBAJ_T0032621.1 MGP_CBAJ_G0019003.1 mouse_genomes_project 11 116400147 116505524 + MGP_CBAJ_P0032621 Tlk2 protein_coding protein_coding MGP_CBAJ_T0032622.1 MGP_CBAJ_G0019003.1 mouse_genomes_project 11 116400164 116513553 + MGP_CBAJ_P0032622 Tlk2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032623.1 MGP_CBAJ_G0019003.1 mouse_genomes_project 11 116400382 116434028 + MGP_CBAJ_P0032623 Tlk2 protein_coding protein_coding MGP_CBAJ_T0032624.1 MGP_CBAJ_G0019003.1 mouse_genomes_project 11 116430885 116462753 + Tlk2 protein_coding retained_intron MGP_CBAJ_T0032625.1 MGP_CBAJ_G0019003.1 mouse_genomes_project 11 116432322 116472619 + MGP_CBAJ_P0032625 Tlk2 protein_coding protein_coding MGP_CBAJ_T0032626.1 MGP_CBAJ_G0019003.1 mouse_genomes_project 11 116468861 116469778 + Tlk2 protein_coding retained_intron MGP_CBAJ_T0032627.1 MGP_CBAJ_G0019003.1 mouse_genomes_project 11 116475918 116499868 + Tlk2 protein_coding processed_transcript MGP_CBAJ_T0003247.1 MGP_CBAJ_G0002999.1 mouse_genomes_project 11 118253726 118255065 - Gm11706 antisense antisense MGP_CBAJ_T0027659.1 MGP_CBAJ_G0017750.1 mouse_genomes_project 11 4011046 4028198 + MGP_CBAJ_P0027659 Zmiz2 protein_coding protein_coding MGP_CBAJ_T0027660.1 MGP_CBAJ_G0017750.1 mouse_genomes_project 11 4011336 4028198 + MGP_CBAJ_P0027660 Zmiz2 protein_coding protein_coding MGP_CBAJ_T0027661.1 MGP_CBAJ_G0017750.1 mouse_genomes_project 11 4011443 4028198 + MGP_CBAJ_P0027661 Zmiz2 protein_coding protein_coding MGP_CBAJ_T0027662.1 MGP_CBAJ_G0017750.1 mouse_genomes_project 11 4017181 4028114 + MGP_CBAJ_P0027662 Zmiz2 protein_coding protein_coding MGP_CBAJ_T0027663.1 MGP_CBAJ_G0017750.1 mouse_genomes_project 11 4017598 4027970 + MGP_CBAJ_P0027663 Zmiz2 protein_coding protein_coding MGP_CBAJ_T0027664.1 MGP_CBAJ_G0017750.1 mouse_genomes_project 11 4018768 4019888 + Zmiz2 protein_coding retained_intron MGP_CBAJ_T0006172.1 MGP_CBAJ_G0005150.1 mouse_genomes_project 11 72478929 72486539 - 2310065F04Rik lincRNA lincRNA MGP_CBAJ_T0006173.1 MGP_CBAJ_G0005150.1 mouse_genomes_project 11 72480472 72483326 - 2310065F04Rik lincRNA lincRNA MGP_CBAJ_T0028369.1 MGP_CBAJ_G0017925.1 mouse_genomes_project 11 49068842 49091560 - MGP_CBAJ_P0028369 Dppa1 protein_coding protein_coding MGP_CBAJ_T0028370.1 MGP_CBAJ_G0017925.1 mouse_genomes_project 11 49069780 49091560 - MGP_CBAJ_P0028370 Dppa1 protein_coding protein_coding MGP_CBAJ_T0031908.1 MGP_CBAJ_G0018823.1 mouse_genomes_project 11 109751340 109752076 - MGP_CBAJ_P0031908 protein_coding protein_coding MGP_CBAJ_T0000805.1 MGP_CBAJ_G0000741.1 mouse_genomes_project 11 14748354 14749055 + TEC TEC MGP_CBAJ_T0032211.1 MGP_CBAJ_G0018924.1 mouse_genomes_project 11 112029979 112037465 - MGP_CBAJ_P0032211 Vat1 protein_coding protein_coding MGP_CBAJ_T0033924.1 MGP_CBAJ_G0019271.1 mouse_genomes_project 11 135032734 135101259 - MGP_CBAJ_P0033924 B3gntl1 protein_coding protein_coding MGP_CBAJ_T0033925.1 MGP_CBAJ_G0019271.1 mouse_genomes_project 11 135043805 135101259 - MGP_CBAJ_P0033925 B3gntl1 protein_coding protein_coding MGP_CBAJ_T0028521.1 MGP_CBAJ_G0017972.1 mouse_genomes_project 11 53244748 53284277 - MGP_CBAJ_P0028521 Maml1 protein_coding protein_coding MGP_CBAJ_T0031808.1 MGP_CBAJ_G0018794.1 mouse_genomes_project 11 108726715 108740182 + MGP_CBAJ_P0031808 Psmd3 protein_coding protein_coding MGP_CBAJ_T0031809.1 MGP_CBAJ_G0018794.1 mouse_genomes_project 11 108726726 108736721 + Psmd3 protein_coding retained_intron MGP_CBAJ_T0031810.1 MGP_CBAJ_G0018794.1 mouse_genomes_project 11 108726752 108739252 + Psmd3 protein_coding retained_intron MGP_CBAJ_T0031811.1 MGP_CBAJ_G0018794.1 mouse_genomes_project 11 108731948 108738043 + MGP_CBAJ_P0031811 Psmd3 protein_coding protein_coding MGP_CBAJ_T0031812.1 MGP_CBAJ_G0018794.1 mouse_genomes_project 11 108734664 108735673 + Psmd3 protein_coding retained_intron MGP_CBAJ_T0028422.1 MGP_CBAJ_G0017944.1 mouse_genomes_project 11 51968716 51974980 + MGP_CBAJ_P0028422 Olfr1395 protein_coding protein_coding MGP_CBAJ_T0028423.1 MGP_CBAJ_G0017944.1 mouse_genomes_project 11 51974026 51974980 + MGP_CBAJ_P0028423 Olfr1395 protein_coding protein_coding MGP_CBAJ_T0028715.1 MGP_CBAJ_G0018023.1 mouse_genomes_project 11 57033677 57034607 + MGP_CBAJ_P0028715 Gm9945 protein_coding protein_coding MGP_CBAJ_T0027878.1 MGP_CBAJ_G0017803.1 mouse_genomes_project 11 20907717 21013999 + MGP_CBAJ_P0027878 Wdpcp protein_coding protein_coding MGP_CBAJ_T0027879.1 MGP_CBAJ_G0017803.1 mouse_genomes_project 11 20907717 21284612 + MGP_CBAJ_P0027879 Wdpcp protein_coding protein_coding MGP_CBAJ_T0027880.1 MGP_CBAJ_G0017803.1 mouse_genomes_project 11 20907787 21051355 + Wdpcp protein_coding processed_transcript MGP_CBAJ_T0027881.1 MGP_CBAJ_G0017803.1 mouse_genomes_project 11 21043368 21067525 + Wdpcp protein_coding processed_transcript MGP_CBAJ_T0027882.1 MGP_CBAJ_G0017803.1 mouse_genomes_project 11 21048915 21107213 + Wdpcp protein_coding processed_transcript MGP_CBAJ_T0027883.1 MGP_CBAJ_G0017803.1 mouse_genomes_project 11 21182853 21189612 + Wdpcp protein_coding processed_transcript MGP_CBAJ_T0029262.1 MGP_CBAJ_G0018176.1 mouse_genomes_project 11 66686837 66864528 + Specc1 protein_coding retained_intron MGP_CBAJ_T0029263.1 MGP_CBAJ_G0018176.1 mouse_genomes_project 11 66686837 66885064 + MGP_CBAJ_P0029263 Specc1 protein_coding protein_coding MGP_CBAJ_T0029264.1 MGP_CBAJ_G0018176.1 mouse_genomes_project 11 66686853 66885516 + MGP_CBAJ_P0029264 Specc1 protein_coding protein_coding MGP_CBAJ_T0029265.1 MGP_CBAJ_G0018176.1 mouse_genomes_project 11 66686884 66784006 + Specc1 protein_coding retained_intron MGP_CBAJ_T0029266.1 MGP_CBAJ_G0018176.1 mouse_genomes_project 11 66686889 66973468 + MGP_CBAJ_P0029266 Specc1 protein_coding protein_coding MGP_CBAJ_T0029267.1 MGP_CBAJ_G0018176.1 mouse_genomes_project 11 66708156 66814747 + Specc1 protein_coding processed_transcript MGP_CBAJ_T0029268.1 MGP_CBAJ_G0018176.1 mouse_genomes_project 11 66742649 66885064 + MGP_CBAJ_P0029268 Specc1 protein_coding protein_coding MGP_CBAJ_T0029269.1 MGP_CBAJ_G0018176.1 mouse_genomes_project 11 66755918 66888719 + MGP_CBAJ_P0029269 Specc1 protein_coding protein_coding MGP_CBAJ_T0029270.1 MGP_CBAJ_G0018176.1 mouse_genomes_project 11 66755934 66973997 + MGP_CBAJ_P0029270 Specc1 protein_coding protein_coding MGP_CBAJ_T0029271.1 MGP_CBAJ_G0018176.1 mouse_genomes_project 11 66768485 66975164 + MGP_CBAJ_P0029271 Specc1 protein_coding protein_coding MGP_CBAJ_T0029272.1 MGP_CBAJ_G0018176.1 mouse_genomes_project 11 66768508 66977048 + MGP_CBAJ_P0029272 Specc1 protein_coding protein_coding MGP_CBAJ_T0029273.1 MGP_CBAJ_G0018176.1 mouse_genomes_project 11 66818034 66977040 + MGP_CBAJ_P0029273 Specc1 protein_coding protein_coding MGP_CBAJ_T0029274.1 MGP_CBAJ_G0018176.1 mouse_genomes_project 11 66818038 66973617 + MGP_CBAJ_P0029274 Specc1 protein_coding protein_coding MGP_CBAJ_T0029275.1 MGP_CBAJ_G0018176.1 mouse_genomes_project 11 66818084 66819361 + Specc1 protein_coding retained_intron MGP_CBAJ_T0029276.1 MGP_CBAJ_G0018176.1 mouse_genomes_project 11 66818098 66885077 + MGP_CBAJ_P0029276 Specc1 protein_coding protein_coding MGP_CBAJ_T0029277.1 MGP_CBAJ_G0018176.1 mouse_genomes_project 11 66818130 66885515 + MGP_CBAJ_P0029277 Specc1 protein_coding protein_coding MGP_CBAJ_T0029278.1 MGP_CBAJ_G0018176.1 mouse_genomes_project 11 66818136 66977048 + MGP_CBAJ_P0029278 Specc1 protein_coding protein_coding MGP_CBAJ_T0003048.1 MGP_CBAJ_G0002836.1 mouse_genomes_project 11 9802371 9823897 + Gm11998 antisense antisense MGP_CBAJ_T0003293.1 MGP_CBAJ_G0003035.1 mouse_genomes_project 11 133949288 133958704 + Myadml2os antisense antisense MGP_CBAJ_T0098688.1 MGP_CBAJ_G0036943.1 mouse_genomes_project 11 61855446 61855549 + Gm24582 snRNA snRNA MGP_CBAJ_T0028735.1 MGP_CBAJ_G0018027.1 mouse_genomes_project 11 57220427 57223832 - MGP_CBAJ_P0028735 Il13 protein_coding protein_coding MGP_CBAJ_T0030929.1 MGP_CBAJ_G0018575.1 mouse_genomes_project 11 91176772 91195049 + Taf15 protein_coding processed_transcript MGP_CBAJ_T0030930.1 MGP_CBAJ_G0018575.1 mouse_genomes_project 11 91176778 91212570 + MGP_CBAJ_P0030930 Taf15 protein_coding protein_coding MGP_CBAJ_T0030931.1 MGP_CBAJ_G0018575.1 mouse_genomes_project 11 91176797 91186135 + Taf15 protein_coding retained_intron MGP_CBAJ_T0030932.1 MGP_CBAJ_G0018575.1 mouse_genomes_project 11 91176801 91194881 + Taf15 protein_coding processed_transcript MGP_CBAJ_T0030933.1 MGP_CBAJ_G0018575.1 mouse_genomes_project 11 91194862 91212568 + MGP_CBAJ_P0030933 Taf15 protein_coding protein_coding MGP_CBAJ_T0030745.1 MGP_CBAJ_G0018522.1 mouse_genomes_project 11 86705204 86708511 - MGP_CBAJ_P0030745 Omg protein_coding protein_coding MGP_CBAJ_T0003171.1 MGP_CBAJ_G0002940.1 mouse_genomes_project 11 90319772 90321214 - Gm11423 antisense antisense MGP_CBAJ_T0003172.1 MGP_CBAJ_G0002940.1 mouse_genomes_project 11 90320002 90321214 - Gm11423 antisense antisense MGP_CBAJ_T0031552.1 MGP_CBAJ_G0018735.1 mouse_genomes_project 11 105924259 105926763 + MGP_CBAJ_P0031552 Hoxb1 protein_coding protein_coding MGP_CBAJ_T0031553.1 MGP_CBAJ_G0018735.1 mouse_genomes_project 11 105924765 105925729 + Hoxb1 protein_coding processed_transcript MGP_CBAJ_T0029931.1 MGP_CBAJ_G0018325.1 mouse_genomes_project 11 76491885 76493426 + MGP_CBAJ_P0029931 Gltpd2 protein_coding protein_coding MGP_CBAJ_T0029932.1 MGP_CBAJ_G0018325.1 mouse_genomes_project 11 76492328 76493209 + MGP_CBAJ_P0029932 Gltpd2 protein_coding protein_coding MGP_CBAJ_T0033412.1 MGP_CBAJ_G0019166.1 mouse_genomes_project 11 130018745 130224084 + MGP_CBAJ_P0033412 Sept9 protein_coding protein_coding MGP_CBAJ_T0033413.1 MGP_CBAJ_G0019166.1 mouse_genomes_project 11 130073465 130224072 + MGP_CBAJ_P0033413 Sept9 protein_coding protein_coding MGP_CBAJ_T0033414.1 MGP_CBAJ_G0019166.1 mouse_genomes_project 11 130110496 130224079 + MGP_CBAJ_P0033414 Sept9 protein_coding protein_coding MGP_CBAJ_T0033415.1 MGP_CBAJ_G0019166.1 mouse_genomes_project 11 130162779 130213968 + MGP_CBAJ_P0033415 Sept9 protein_coding protein_coding MGP_CBAJ_T0033416.1 MGP_CBAJ_G0019166.1 mouse_genomes_project 11 130181075 130218132 + MGP_CBAJ_P0033416 Sept9 protein_coding protein_coding MGP_CBAJ_T0033417.1 MGP_CBAJ_G0019166.1 mouse_genomes_project 11 130191223 130223385 + Sept9 protein_coding retained_intron MGP_CBAJ_T0033418.1 MGP_CBAJ_G0019166.1 mouse_genomes_project 11 130214935 130218755 + Sept9 protein_coding retained_intron MGP_CBAJ_T0033419.1 MGP_CBAJ_G0019166.1 mouse_genomes_project 11 130221115 130222622 + Sept9 protein_coding retained_intron MGP_CBAJ_T0003188.1 MGP_CBAJ_G0002952.1 mouse_genomes_project 11 97608246 97612579 + Dgkeos antisense antisense MGP_CBAJ_T0003189.1 MGP_CBAJ_G0002952.1 mouse_genomes_project 11 97609583 97612579 + Dgkeos antisense antisense MGP_CBAJ_T0003190.1 MGP_CBAJ_G0002952.1 mouse_genomes_project 11 97609757 97611362 + Dgkeos antisense antisense MGP_CBAJ_T0003191.1 MGP_CBAJ_G0002952.1 mouse_genomes_project 11 97609761 97611362 + Dgkeos antisense antisense MGP_CBAJ_T0028412.1 MGP_CBAJ_G0017940.1 mouse_genomes_project 11 51857700 51868756 - MGP_CBAJ_P0028412 Tgtp2 protein_coding protein_coding MGP_CBAJ_T0099900.1 MGP_CBAJ_G0038155.1 mouse_genomes_project 11 4294160 4294293 - Gm24313 snoRNA snoRNA MGP_CBAJ_T0032509.1 MGP_CBAJ_G0018977.1 mouse_genomes_project 11 114034512 114043333 + MGP_CBAJ_P0032509 Hexim2 protein_coding protein_coding MGP_CBAJ_T0032510.1 MGP_CBAJ_G0018977.1 mouse_genomes_project 11 114035237 114044026 + MGP_CBAJ_P0032510 Hexim2 protein_coding protein_coding MGP_CBAJ_T0032511.1 MGP_CBAJ_G0018977.1 mouse_genomes_project 11 114035262 114043481 + MGP_CBAJ_P0032511 Hexim2 protein_coding protein_coding MGP_CBAJ_T0032512.1 MGP_CBAJ_G0018977.1 mouse_genomes_project 11 114035268 114044711 + MGP_CBAJ_P0032512 Hexim2 protein_coding protein_coding MGP_CBAJ_T0032513.1 MGP_CBAJ_G0018977.1 mouse_genomes_project 11 114035788 114043114 + MGP_CBAJ_P0032513 Hexim2 protein_coding protein_coding MGP_CBAJ_T0012307.1 MGP_CBAJ_G0010419.1 mouse_genomes_project 11 578319 578795 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012540.1 MGP_CBAJ_G0010652.1 mouse_genomes_project 11 90286202 90286604 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099941.1 MGP_CBAJ_G0038196.1 mouse_genomes_project 11 83873392 83873513 + Gm22772 snoRNA snoRNA MGP_CBAJ_T0028955.1 MGP_CBAJ_G0018100.1 mouse_genomes_project 11 63067404 63071464 + MGP_CBAJ_P0028955 Olfr314 protein_coding protein_coding MGP_CBAJ_T0028956.1 MGP_CBAJ_G0018100.1 mouse_genomes_project 11 63070582 63071713 + MGP_CBAJ_P0028956 Olfr314 protein_coding protein_coding MGP_CBAJ_T0031252.1 MGP_CBAJ_G0018653.1 mouse_genomes_project 11 97477101 97479403 - MGP_CBAJ_P0031252 Gm15698 protein_coding protein_coding MGP_CBAJ_T0003087.1 MGP_CBAJ_G0002869.1 mouse_genomes_project 11 55365277 55365961 - Gm12205 antisense antisense MGP_CBAJ_T0028904.1 MGP_CBAJ_G0018072.1 mouse_genomes_project 11 62410239 62420090 + MGP_CBAJ_P0028904 Igtp protein_coding protein_coding MGP_CBAJ_T0028905.1 MGP_CBAJ_G0018072.1 mouse_genomes_project 11 62410271 62420074 + MGP_CBAJ_P0028905 Igtp protein_coding protein_coding MGP_CBAJ_T0012568.1 MGP_CBAJ_G0010680.1 mouse_genomes_project 11 106817579 106817699 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031570.1 MGP_CBAJ_G0018738.1 mouse_genomes_project 11 106402264 106419247 + MGP_CBAJ_P0031570 Cbx1 protein_coding protein_coding MGP_CBAJ_T0031571.1 MGP_CBAJ_G0018738.1 mouse_genomes_project 11 106402274 106425353 + MGP_CBAJ_P0031571 Cbx1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031572.1 MGP_CBAJ_G0018738.1 mouse_genomes_project 11 106402296 106425844 + MGP_CBAJ_P0031572 Cbx1 protein_coding protein_coding MGP_CBAJ_T0031573.1 MGP_CBAJ_G0018738.1 mouse_genomes_project 11 106402312 106416683 + Cbx1 protein_coding retained_intron MGP_CBAJ_T0031574.1 MGP_CBAJ_G0018738.1 mouse_genomes_project 11 106402386 106425744 + MGP_CBAJ_P0031574 Cbx1 protein_coding protein_coding MGP_CBAJ_T0016982.1 MGP_CBAJ_G0014937.1 mouse_genomes_project 11 106497925 106508745 - Gm11523 processed_transcript lincRNA MGP_CBAJ_T0016983.1 MGP_CBAJ_G0014937.1 mouse_genomes_project 11 106498218 106508751 - Gm11523 processed_transcript lincRNA MGP_CBAJ_T0016984.1 MGP_CBAJ_G0014937.1 mouse_genomes_project 11 106498347 106508731 - Gm11523 processed_transcript antisense MGP_CBAJ_T0031044.1 MGP_CBAJ_G0018604.1 mouse_genomes_project 11 93084192 93098695 + MGP_CBAJ_P0031044 1700125H20Rik protein_coding protein_coding MGP_CBAJ_T0031045.1 MGP_CBAJ_G0018604.1 mouse_genomes_project 11 93084884 93098695 + MGP_CBAJ_P0031045 1700125H20Rik protein_coding protein_coding MGP_CBAJ_T0011169.1 MGP_CBAJ_G0009307.1 mouse_genomes_project 11 783432 783579 - Gm27640 misc_RNA misc_RNA MGP_CBAJ_T0098262.1 MGP_CBAJ_G0036534.1 mouse_genomes_project 11 87861610 87863300 - C030013C21Rik sense_intronic sense_intronic MGP_CBAJ_T0030939.1 MGP_CBAJ_G0018579.1 mouse_genomes_project 11 91289431 91294667 - MGP_CBAJ_P0030939 Ccl6 protein_coding protein_coding MGP_CBAJ_T0030940.1 MGP_CBAJ_G0018579.1 mouse_genomes_project 11 91289944 91291444 - Ccl6 protein_coding retained_intron MGP_CBAJ_T0030941.1 MGP_CBAJ_G0018579.1 mouse_genomes_project 11 91291021 91294555 - Ccl6 protein_coding retained_intron MGP_CBAJ_T0012331.1 MGP_CBAJ_G0010443.1 mouse_genomes_project 11 5952950 5954682 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0027458.1 MGP_CBAJ_G0017705.1 mouse_genomes_project 11 1391692 1398235 - Ccdc157 protein_coding processed_transcript MGP_CBAJ_T0027459.1 MGP_CBAJ_G0017705.1 mouse_genomes_project 11 1391692 1414803 - MGP_CBAJ_P0027459 Ccdc157 protein_coding protein_coding MGP_CBAJ_T0027460.1 MGP_CBAJ_G0017705.1 mouse_genomes_project 11 1391692 1414805 - MGP_CBAJ_P0027460 Ccdc157 protein_coding protein_coding MGP_CBAJ_T0027461.1 MGP_CBAJ_G0017705.1 mouse_genomes_project 11 1399383 1414730 - Ccdc157 protein_coding processed_transcript MGP_CBAJ_T0027462.1 MGP_CBAJ_G0017705.1 mouse_genomes_project 11 1400577 1414730 - Ccdc157 protein_coding processed_transcript MGP_CBAJ_T0027463.1 MGP_CBAJ_G0017705.1 mouse_genomes_project 11 1402060 1414764 - Ccdc157 protein_coding processed_transcript MGP_CBAJ_T0009638.1 MGP_CBAJ_G0007776.1 mouse_genomes_project 11 118221785 118221852 - Mir3064 miRNA miRNA MGP_CBAJ_T0012415.1 MGP_CBAJ_G0010527.1 mouse_genomes_project 11 37160069 37160805 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0027689.1 MGP_CBAJ_G0017757.1 mouse_genomes_project 11 4289858 4300455 - MGP_CBAJ_P0027689 Tbrg4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027690.1 MGP_CBAJ_G0017757.1 mouse_genomes_project 11 4289859 4300479 - MGP_CBAJ_P0027690 Tbrg4 protein_coding protein_coding MGP_CBAJ_T0027691.1 MGP_CBAJ_G0017757.1 mouse_genomes_project 11 4290707 4300455 - MGP_CBAJ_P0027691 Tbrg4 protein_coding protein_coding MGP_CBAJ_T0027692.1 MGP_CBAJ_G0017757.1 mouse_genomes_project 11 4290709 4300455 - MGP_CBAJ_P0027692 Tbrg4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027693.1 MGP_CBAJ_G0017757.1 mouse_genomes_project 11 4291538 4292383 - Tbrg4 protein_coding retained_intron MGP_CBAJ_T0027694.1 MGP_CBAJ_G0017757.1 mouse_genomes_project 11 4293908 4295268 - Tbrg4 protein_coding processed_transcript MGP_CBAJ_T0027695.1 MGP_CBAJ_G0017757.1 mouse_genomes_project 11 4293938 4294798 - Tbrg4 protein_coding retained_intron MGP_CBAJ_T0027696.1 MGP_CBAJ_G0017757.1 mouse_genomes_project 11 4294354 4295604 - Tbrg4 protein_coding retained_intron MGP_CBAJ_T0027697.1 MGP_CBAJ_G0017757.1 mouse_genomes_project 11 4294532 4295418 - Tbrg4 protein_coding processed_transcript MGP_CBAJ_T0027698.1 MGP_CBAJ_G0017757.1 mouse_genomes_project 11 4295349 4300479 - MGP_CBAJ_P0027698 Tbrg4 protein_coding protein_coding MGP_CBAJ_T0027699.1 MGP_CBAJ_G0017757.1 mouse_genomes_project 11 4297608 4300434 - Tbrg4 protein_coding processed_transcript MGP_CBAJ_T0027700.1 MGP_CBAJ_G0017757.1 mouse_genomes_project 11 4298316 4299891 - MGP_CBAJ_P0027700 Tbrg4 protein_coding protein_coding MGP_CBAJ_T0009646.1 MGP_CBAJ_G0007784.1 mouse_genomes_project 11 129886214 129886324 + Mir6516 miRNA miRNA MGP_CBAJ_T0032276.1 MGP_CBAJ_G0018936.1 mouse_genomes_project 11 112662632 112670610 + MGP_CBAJ_P0032276 1700006E09Rik protein_coding protein_coding MGP_CBAJ_T0032277.1 MGP_CBAJ_G0018936.1 mouse_genomes_project 11 112662637 112669204 + MGP_CBAJ_P0032277 1700006E09Rik protein_coding protein_coding MGP_CBAJ_T0032278.1 MGP_CBAJ_G0018936.1 mouse_genomes_project 11 112665409 112670618 + MGP_CBAJ_P0032278 1700006E09Rik protein_coding protein_coding MGP_CBAJ_T0028197.1 MGP_CBAJ_G0017878.1 mouse_genomes_project 11 35241612 35245371 - MGP_CBAJ_P0028197 Foxi1 protein_coding protein_coding MGP_CBAJ_T0028688.1 MGP_CBAJ_G0018014.1 mouse_genomes_project 11 56848869 56857420 + MGP_CBAJ_P0028688 Zcchc10 protein_coding protein_coding MGP_CBAJ_T0028689.1 MGP_CBAJ_G0018014.1 mouse_genomes_project 11 56851590 56856598 + MGP_CBAJ_P0028689 Zcchc10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012550.1 MGP_CBAJ_G0010662.1 mouse_genomes_project 11 95636811 95638158 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012557.1 MGP_CBAJ_G0010669.1 mouse_genomes_project 11 100678859 100679808 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0029650.1 MGP_CBAJ_G0018263.1 mouse_genomes_project 11 75351275 75353440 - Wrap53 protein_coding processed_transcript MGP_CBAJ_T0029651.1 MGP_CBAJ_G0018263.1 mouse_genomes_project 11 75351276 75373915 - MGP_CBAJ_P0029651 Wrap53 protein_coding protein_coding MGP_CBAJ_T0029652.1 MGP_CBAJ_G0018263.1 mouse_genomes_project 11 75372298 75374846 - MGP_CBAJ_P0029652 Wrap53 protein_coding protein_coding MGP_CBAJ_T0012391.1 MGP_CBAJ_G0010503.1 mouse_genomes_project 11 29604038 29604978 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012440.1 MGP_CBAJ_G0010552.1 mouse_genomes_project 11 52629815 52630302 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012382.1 MGP_CBAJ_G0010494.1 mouse_genomes_project 11 26638835 26639304 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006135.1 MGP_CBAJ_G0005117.1 mouse_genomes_project 11 45431505 45433207 + Gm12148 lincRNA lincRNA MGP_CBAJ_T0028198.1 MGP_CBAJ_G0017879.1 mouse_genomes_project 11 35263854 35862099 - MGP_CBAJ_P0028198 Dock2 protein_coding protein_coding MGP_CBAJ_T0028199.1 MGP_CBAJ_G0017879.1 mouse_genomes_project 11 35269968 35271086 - Dock2 protein_coding retained_intron MGP_CBAJ_T0028200.1 MGP_CBAJ_G0017879.1 mouse_genomes_project 11 35314184 35862099 - MGP_CBAJ_P0028200 Dock2 protein_coding protein_coding MGP_CBAJ_T0028201.1 MGP_CBAJ_G0017879.1 mouse_genomes_project 11 35350640 35355627 - Dock2 protein_coding retained_intron MGP_CBAJ_T0028204.1 MGP_CBAJ_G0017879.1 mouse_genomes_project 11 35409442 35759697 - MGP_CBAJ_P0028204 Dock2 protein_coding protein_coding MGP_CBAJ_T0028205.1 MGP_CBAJ_G0017879.1 mouse_genomes_project 11 35497340 35862090 - Dock2 protein_coding retained_intron MGP_CBAJ_T0028206.1 MGP_CBAJ_G0017879.1 mouse_genomes_project 11 35497340 35862099 - MGP_CBAJ_P0028206 Dock2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027668.1 MGP_CBAJ_G0017752.1 mouse_genomes_project 11 4059645 4078329 - MGP_CBAJ_P0027668 H2afv protein_coding protein_coding MGP_CBAJ_T0027669.1 MGP_CBAJ_G0017752.1 mouse_genomes_project 11 4060554 4078238 - MGP_CBAJ_P0027669 H2afv protein_coding protein_coding MGP_CBAJ_T0027895.1 MGP_CBAJ_G0017807.1 mouse_genomes_project 11 22253701 22372146 - MGP_CBAJ_P0027895 Gm12057 protein_coding nonsense_mediated_decay MGP_CBAJ_T0098257.1 MGP_CBAJ_G0036529.1 mouse_genomes_project 11 442526 443865 - Gm11948 sense_intronic sense_intronic MGP_CBAJ_T0029103.1 MGP_CBAJ_G0018143.1 mouse_genomes_project 11 64911739 64928261 - MGP_CBAJ_P0029103 Atpaf2 protein_coding protein_coding MGP_CBAJ_T0029104.1 MGP_CBAJ_G0018143.1 mouse_genomes_project 11 64912596 64928228 - MGP_CBAJ_P0029104 Atpaf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029105.1 MGP_CBAJ_G0018143.1 mouse_genomes_project 11 64914958 64928252 - Atpaf2 protein_coding processed_transcript MGP_CBAJ_T0029106.1 MGP_CBAJ_G0018143.1 mouse_genomes_project 11 64917017 64928245 - Atpaf2 protein_coding processed_transcript MGP_CBAJ_T0029107.1 MGP_CBAJ_G0018143.1 mouse_genomes_project 11 64918595 64929667 - Atpaf2 protein_coding processed_transcript MGP_CBAJ_T0029108.1 MGP_CBAJ_G0018143.1 mouse_genomes_project 11 64920428 64928246 - Atpaf2 protein_coding retained_intron MGP_CBAJ_T0031847.1 MGP_CBAJ_G0018801.1 mouse_genomes_project 11 108903290 108936919 + MGP_CBAJ_P0031847 Rapgefl1 protein_coding protein_coding MGP_CBAJ_T0031848.1 MGP_CBAJ_G0018801.1 mouse_genomes_project 11 108924596 108926866 + Rapgefl1 protein_coding retained_intron MGP_CBAJ_T0031849.1 MGP_CBAJ_G0018801.1 mouse_genomes_project 11 108933551 108936221 + Rapgefl1 protein_coding retained_intron MGP_CBAJ_T0011182.1 MGP_CBAJ_G0009320.1 mouse_genomes_project 11 93228169 93228465 - Gm22587 misc_RNA misc_RNA MGP_CBAJ_T0030222.1 MGP_CBAJ_G0018389.1 mouse_genomes_project 11 79702575 79706995 - MGP_CBAJ_P0030222 Olfr1 protein_coding protein_coding MGP_CBAJ_T0030223.1 MGP_CBAJ_G0018389.1 mouse_genomes_project 11 79702931 79706995 - MGP_CBAJ_P0030223 Olfr1 protein_coding protein_coding MGP_CBAJ_T0099949.1 MGP_CBAJ_G0038204.1 mouse_genomes_project 11 90988070 90988167 + Snord7 snoRNA snoRNA MGP_CBAJ_T0028644.1 MGP_CBAJ_G0018004.1 mouse_genomes_project 11 55277422 55287111 + MGP_CBAJ_P0028644 Cdkn2aipnl protein_coding protein_coding MGP_CBAJ_T0028645.1 MGP_CBAJ_G0018004.1 mouse_genomes_project 11 55277653 55286021 + MGP_CBAJ_P0028645 Cdkn2aipnl protein_coding nonsense_mediated_decay MGP_CBAJ_T0003279.1 MGP_CBAJ_G0003025.1 mouse_genomes_project 11 130752340 130753757 - Gm11724 antisense antisense MGP_CBAJ_T0011181.1 MGP_CBAJ_G0009319.1 mouse_genomes_project 11 91586591 91586899 + Gm23211 misc_RNA misc_RNA MGP_CBAJ_T0017009.1 MGP_CBAJ_G0014957.1 mouse_genomes_project 11 124818016 124880095 - BC006965 processed_transcript processed_transcript MGP_CBAJ_T0017010.1 MGP_CBAJ_G0014957.1 mouse_genomes_project 11 124818891 124832370 - BC006965 processed_transcript processed_transcript MGP_CBAJ_T0017011.1 MGP_CBAJ_G0014957.1 mouse_genomes_project 11 124818908 124829581 - BC006965 processed_transcript processed_transcript MGP_CBAJ_T0017012.1 MGP_CBAJ_G0014957.1 mouse_genomes_project 11 124829383 124838610 - BC006965 processed_transcript processed_transcript MGP_CBAJ_T0017013.1 MGP_CBAJ_G0014957.1 mouse_genomes_project 11 124830374 124832370 - BC006965 processed_transcript processed_transcript MGP_CBAJ_T0017014.1 MGP_CBAJ_G0014957.1 mouse_genomes_project 11 124832246 124879661 - BC006965 processed_transcript processed_transcript MGP_CBAJ_T0017015.1 MGP_CBAJ_G0014957.1 mouse_genomes_project 11 124832333 124880079 - BC006965 processed_transcript processed_transcript MGP_CBAJ_T0017016.1 MGP_CBAJ_G0014957.1 mouse_genomes_project 11 124838679 124856995 - BC006965 processed_transcript processed_transcript MGP_CBAJ_T0017017.1 MGP_CBAJ_G0014957.1 mouse_genomes_project 11 124838795 124880101 - BC006965 processed_transcript processed_transcript MGP_CBAJ_T0017018.1 MGP_CBAJ_G0014957.1 mouse_genomes_project 11 124838870 124880079 - BC006965 processed_transcript processed_transcript MGP_CBAJ_T0017019.1 MGP_CBAJ_G0014957.1 mouse_genomes_project 11 124848180 124857154 - BC006965 processed_transcript processed_transcript MGP_CBAJ_T0017020.1 MGP_CBAJ_G0014957.1 mouse_genomes_project 11 124848291 124880102 - BC006965 processed_transcript processed_transcript MGP_CBAJ_T0017021.1 MGP_CBAJ_G0014957.1 mouse_genomes_project 11 124848398 124880095 - BC006965 processed_transcript processed_transcript MGP_CBAJ_T0017022.1 MGP_CBAJ_G0014957.1 mouse_genomes_project 11 124853391 124880080 - BC006965 processed_transcript processed_transcript MGP_CBAJ_T0017023.1 MGP_CBAJ_G0014957.1 mouse_genomes_project 11 124853391 124880080 - BC006965 processed_transcript processed_transcript MGP_CBAJ_T0017024.1 MGP_CBAJ_G0014957.1 mouse_genomes_project 11 124853393 124950636 - BC006965 processed_transcript processed_transcript MGP_CBAJ_T0017025.1 MGP_CBAJ_G0014957.1 mouse_genomes_project 11 124856959 124880078 - BC006965 processed_transcript processed_transcript MGP_CBAJ_T0017026.1 MGP_CBAJ_G0014957.1 mouse_genomes_project 11 124888079 124912929 - BC006965 processed_transcript processed_transcript MGP_CBAJ_T0027328.1 MGP_CBAJ_G0017681.1 mouse_genomes_project 11 274071 317806 + MGP_CBAJ_P0027328 Eif4enif1 protein_coding protein_coding MGP_CBAJ_T0027329.1 MGP_CBAJ_G0017681.1 mouse_genomes_project 11 274344 295733 + Eif4enif1 protein_coding retained_intron MGP_CBAJ_T0027330.1 MGP_CBAJ_G0017681.1 mouse_genomes_project 11 274344 317813 + MGP_CBAJ_P0027330 Eif4enif1 protein_coding protein_coding MGP_CBAJ_T0027331.1 MGP_CBAJ_G0017681.1 mouse_genomes_project 11 274370 286896 + Eif4enif1 protein_coding retained_intron MGP_CBAJ_T0027332.1 MGP_CBAJ_G0017681.1 mouse_genomes_project 11 274415 293952 + MGP_CBAJ_P0027332 Eif4enif1 protein_coding protein_coding MGP_CBAJ_T0027333.1 MGP_CBAJ_G0017681.1 mouse_genomes_project 11 274676 317810 + MGP_CBAJ_P0027333 Eif4enif1 protein_coding protein_coding MGP_CBAJ_T0027334.1 MGP_CBAJ_G0017681.1 mouse_genomes_project 11 274702 317812 + MGP_CBAJ_P0027334 Eif4enif1 protein_coding protein_coding MGP_CBAJ_T0027335.1 MGP_CBAJ_G0017681.1 mouse_genomes_project 11 275311 317811 + MGP_CBAJ_P0027335 Eif4enif1 protein_coding protein_coding MGP_CBAJ_T0027336.1 MGP_CBAJ_G0017681.1 mouse_genomes_project 11 301159 303407 + Eif4enif1 protein_coding retained_intron MGP_CBAJ_T0027337.1 MGP_CBAJ_G0017681.1 mouse_genomes_project 11 301159 303370 + Eif4enif1 protein_coding retained_intron MGP_CBAJ_T0027338.1 MGP_CBAJ_G0017681.1 mouse_genomes_project 11 301205 312684 + MGP_CBAJ_P0027338 Eif4enif1 protein_coding protein_coding MGP_CBAJ_T0027339.1 MGP_CBAJ_G0017681.1 mouse_genomes_project 11 307452 314200 + Eif4enif1 protein_coding retained_intron MGP_CBAJ_T0027340.1 MGP_CBAJ_G0017681.1 mouse_genomes_project 11 308778 312666 + Eif4enif1 protein_coding retained_intron MGP_CBAJ_T0032476.1 MGP_CBAJ_G0018970.1 mouse_genomes_project 11 113744799 113776397 - MGP_CBAJ_P0032476 Kif18b protein_coding protein_coding MGP_CBAJ_T0032477.1 MGP_CBAJ_G0018970.1 mouse_genomes_project 11 113762167 113776361 - Kif18b protein_coding processed_transcript MGP_CBAJ_T0028868.1 MGP_CBAJ_G0018060.1 mouse_genomes_project 11 59988815 60004678 - MGP_CBAJ_P0028868 Nmur2 protein_coding protein_coding MGP_CBAJ_T0030945.1 MGP_CBAJ_G0018583.1 mouse_genomes_project 11 91428351 91430628 + MGP_CBAJ_P0030945 Wfdc17 protein_coding protein_coding MGP_CBAJ_T0012318.1 MGP_CBAJ_G0010430.1 mouse_genomes_project 11 3160020 3160297 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0030796.1 MGP_CBAJ_G0018535.1 mouse_genomes_project 11 87611453 87674143 + MGP_CBAJ_P0030796 Rhbdl3 protein_coding protein_coding MGP_CBAJ_T0030797.1 MGP_CBAJ_G0018535.1 mouse_genomes_project 11 87633515 87637984 + Rhbdl3 protein_coding retained_intron MGP_CBAJ_T0030798.1 MGP_CBAJ_G0018535.1 mouse_genomes_project 11 87662616 87671870 + Rhbdl3 protein_coding retained_intron MGP_CBAJ_T0009581.1 MGP_CBAJ_G0007719.1 mouse_genomes_project 11 75888015 75888104 + Mir324 miRNA miRNA MGP_CBAJ_T0099905.1 MGP_CBAJ_G0038160.1 mouse_genomes_project 11 11026532 11026662 + Gm22789 snoRNA snoRNA MGP_CBAJ_T0030229.1 MGP_CBAJ_G0018395.1 mouse_genomes_project 11 80028527 80067019 + MGP_CBAJ_P0030229 Zfp735 protein_coding protein_coding MGP_CBAJ_T0030230.1 MGP_CBAJ_G0018395.1 mouse_genomes_project 11 80028548 80064050 + Zfp735 protein_coding processed_transcript MGP_CBAJ_T0030231.1 MGP_CBAJ_G0018395.1 mouse_genomes_project 11 80034418 80063982 + Zfp735 protein_coding processed_transcript MGP_CBAJ_T0012608.1 MGP_CBAJ_G0010720.1 mouse_genomes_project 11 126045153 126045658 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0030955.1 MGP_CBAJ_G0018587.1 mouse_genomes_project 11 91595431 91658480 + MGP_CBAJ_P0030955 Hnf1b protein_coding protein_coding MGP_CBAJ_T0030956.1 MGP_CBAJ_G0018587.1 mouse_genomes_project 11 91595606 91657595 + MGP_CBAJ_P0030956 Hnf1b protein_coding protein_coding MGP_CBAJ_T0030957.1 MGP_CBAJ_G0018587.1 mouse_genomes_project 11 91596799 91611899 + MGP_CBAJ_P0030957 Hnf1b protein_coding protein_coding MGP_CBAJ_T0033468.1 MGP_CBAJ_G0019179.1 mouse_genomes_project 11 130936865 130939973 - MGP_CBAJ_P0033468 Socs3 protein_coding protein_coding MGP_CBAJ_T0033469.1 MGP_CBAJ_G0019179.1 mouse_genomes_project 11 130939661 130940834 - Socs3 protein_coding processed_transcript MGP_CBAJ_T0033470.1 MGP_CBAJ_G0019179.1 mouse_genomes_project 11 130939720 130940238 - Socs3 protein_coding processed_transcript MGP_CBAJ_T0030958.1 MGP_CBAJ_G0018588.1 mouse_genomes_project 11 91697608 91720862 + MGP_CBAJ_P0030958 Ddx52 protein_coding protein_coding MGP_CBAJ_T0030959.1 MGP_CBAJ_G0018588.1 mouse_genomes_project 11 91704034 91709955 + Ddx52 protein_coding processed_transcript MGP_CBAJ_T0006250.1 MGP_CBAJ_G0005204.1 mouse_genomes_project 11 113813346 113820171 - 2410004I01Rik lincRNA lincRNA MGP_CBAJ_T0009530.1 MGP_CBAJ_G0007668.1 mouse_genomes_project 11 1389933 1390016 + Mir3060 miRNA miRNA MGP_CBAJ_T0006285.1 MGP_CBAJ_G0005231.1 mouse_genomes_project 11 132167851 132172660 - Gm11754 lincRNA lincRNA MGP_CBAJ_T0003265.1 MGP_CBAJ_G0003013.1 mouse_genomes_project 11 121635504 121641094 + Gm11683 antisense antisense MGP_CBAJ_T0028901.1 MGP_CBAJ_G0018071.1 mouse_genomes_project 11 62372556 62380454 + MGP_CBAJ_P0028901 Mrpl22 protein_coding protein_coding MGP_CBAJ_T0028902.1 MGP_CBAJ_G0018071.1 mouse_genomes_project 11 62372580 62377099 + Mrpl22 protein_coding processed_transcript MGP_CBAJ_T0028903.1 MGP_CBAJ_G0018071.1 mouse_genomes_project 11 62372593 62378177 + Mrpl22 protein_coding processed_transcript MGP_CBAJ_T0003107.1 MGP_CBAJ_G0002887.1 mouse_genomes_project 11 63199752 63201512 + Gm12257 antisense antisense MGP_CBAJ_T0098712.1 MGP_CBAJ_G0036967.1 mouse_genomes_project 11 94467072 94467178 - Gm26439 snRNA snRNA MGP_CBAJ_T0029797.1 MGP_CBAJ_G0018297.1 mouse_genomes_project 11 75835252 75837398 + MGP_CBAJ_P0029797 Cldn7 protein_coding protein_coding MGP_CBAJ_T0029798.1 MGP_CBAJ_G0018297.1 mouse_genomes_project 11 75835887 75838318 + MGP_CBAJ_P0029798 Cldn7 protein_coding protein_coding MGP_CBAJ_T0029799.1 MGP_CBAJ_G0018297.1 mouse_genomes_project 11 75837346 75838081 + MGP_CBAJ_P0029799 Cldn7 protein_coding protein_coding MGP_CBAJ_T0029116.1 MGP_CBAJ_G0018146.1 mouse_genomes_project 11 64993630 65060809 + MGP_CBAJ_P0029116 Myo15 protein_coding protein_coding MGP_CBAJ_T0029117.1 MGP_CBAJ_G0018146.1 mouse_genomes_project 11 64993630 65060809 + MGP_CBAJ_P0029117 Myo15 protein_coding protein_coding MGP_CBAJ_T0029118.1 MGP_CBAJ_G0018146.1 mouse_genomes_project 11 64993630 65060809 + MGP_CBAJ_P0029118 Myo15 protein_coding protein_coding MGP_CBAJ_T0029119.1 MGP_CBAJ_G0018146.1 mouse_genomes_project 11 65004158 65036871 + MGP_CBAJ_P0029119 Myo15 protein_coding protein_coding MGP_CBAJ_T0029120.1 MGP_CBAJ_G0018146.1 mouse_genomes_project 11 65036692 65053546 + Myo15 protein_coding retained_intron MGP_CBAJ_T0003073.1 MGP_CBAJ_G0002856.1 mouse_genomes_project 11 45261377 45264080 - Gm12144 antisense antisense MGP_CBAJ_T0030783.1 MGP_CBAJ_G0018532.1 mouse_genomes_project 11 87445807 87470630 + MGP_CBAJ_P0030783 Adap2 protein_coding protein_coding MGP_CBAJ_T0030784.1 MGP_CBAJ_G0018532.1 mouse_genomes_project 11 87445818 87457475 + MGP_CBAJ_P0030784 Adap2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0101544.1 MGP_CBAJ_G0039576.1 mouse_genomes_project 11 79964046 79967229 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0028401.1 MGP_CBAJ_G0017933.1 mouse_genomes_project 11 51598994 51609455 - Irgm1 protein_coding processed_transcript MGP_CBAJ_T0028402.1 MGP_CBAJ_G0017933.1 mouse_genomes_project 11 51602271 51609146 - MGP_CBAJ_P0028402 Irgm1 protein_coding protein_coding MGP_CBAJ_T0028403.1 MGP_CBAJ_G0017933.1 mouse_genomes_project 11 51603144 51609192 - MGP_CBAJ_P0028403 Irgm1 protein_coding protein_coding MGP_CBAJ_T0031959.1 MGP_CBAJ_G0018866.1 mouse_genomes_project 11 110603762 110608881 - MGP_CBAJ_P0031959 Krt16 protein_coding protein_coding MGP_CBAJ_T0027327.1 MGP_CBAJ_G0017680.1 mouse_genomes_project 11 87162 91882 - protein_coding processed_transcript MGP_CBAJ_T0033036.1 MGP_CBAJ_G0019099.1 mouse_genomes_project 11 127775959 127793898 - MGP_CBAJ_P0033036 Fads6 protein_coding protein_coding MGP_CBAJ_T0033037.1 MGP_CBAJ_G0019099.1 mouse_genomes_project 11 127791403 127794047 - Fads6 protein_coding processed_transcript MGP_CBAJ_T0028333.1 MGP_CBAJ_G0017913.1 mouse_genomes_project 11 48327734 48336408 - MGP_CBAJ_P0028333 Thg1l protein_coding protein_coding MGP_CBAJ_T0028334.1 MGP_CBAJ_G0017913.1 mouse_genomes_project 11 48327734 48336102 - MGP_CBAJ_P0028334 Thg1l protein_coding protein_coding MGP_CBAJ_T0028335.1 MGP_CBAJ_G0017913.1 mouse_genomes_project 11 48331105 48335330 - Thg1l protein_coding processed_transcript MGP_CBAJ_T0028336.1 MGP_CBAJ_G0017913.1 mouse_genomes_project 11 48332087 48336071 - Thg1l protein_coding processed_transcript MGP_CBAJ_T0028337.1 MGP_CBAJ_G0017913.1 mouse_genomes_project 11 48335180 48336397 - Thg1l protein_coding processed_transcript MGP_CBAJ_T0006159.1 MGP_CBAJ_G0005140.1 mouse_genomes_project 11 66588920 66591623 - A530017D24Rik lincRNA lincRNA MGP_CBAJ_T0006160.1 MGP_CBAJ_G0005140.1 mouse_genomes_project 11 66589556 66592412 - A530017D24Rik lincRNA lincRNA MGP_CBAJ_T0028723.1 MGP_CBAJ_G0018025.1 mouse_genomes_project 11 57143728 57178068 + MGP_CBAJ_P0028723 Kif3a protein_coding protein_coding MGP_CBAJ_T0028724.1 MGP_CBAJ_G0018025.1 mouse_genomes_project 11 57143728 57177228 + MGP_CBAJ_P0028724 Kif3a protein_coding protein_coding MGP_CBAJ_T0028725.1 MGP_CBAJ_G0018025.1 mouse_genomes_project 11 57143746 57177225 + MGP_CBAJ_P0028725 Kif3a protein_coding protein_coding MGP_CBAJ_T0028726.1 MGP_CBAJ_G0018025.1 mouse_genomes_project 11 57143875 57177182 + MGP_CBAJ_P0028726 Kif3a protein_coding protein_coding MGP_CBAJ_T0028727.1 MGP_CBAJ_G0018025.1 mouse_genomes_project 11 57144065 57155491 + Kif3a protein_coding processed_transcript MGP_CBAJ_T0028728.1 MGP_CBAJ_G0018025.1 mouse_genomes_project 11 57144210 57156116 + MGP_CBAJ_P0028728 Kif3a protein_coding protein_coding MGP_CBAJ_T0028729.1 MGP_CBAJ_G0018025.1 mouse_genomes_project 11 57155475 57163255 + MGP_CBAJ_P0028729 Kif3a protein_coding nonsense_mediated_decay MGP_CBAJ_T0028730.1 MGP_CBAJ_G0018025.1 mouse_genomes_project 11 57170309 57177423 + MGP_CBAJ_P0028730 Kif3a protein_coding protein_coding MGP_CBAJ_T0006144.1 MGP_CBAJ_G0005125.1 mouse_genomes_project 11 49068944 49070037 - lincRNA lincRNA MGP_CBAJ_T0031035.1 MGP_CBAJ_G0018603.1 mouse_genomes_project 11 92876499 93049933 - MGP_CBAJ_P0031035 Usp32 protein_coding protein_coding MGP_CBAJ_T0031036.1 MGP_CBAJ_G0018603.1 mouse_genomes_project 11 92877704 92931890 - MGP_CBAJ_P0031036 Usp32 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031037.1 MGP_CBAJ_G0018603.1 mouse_genomes_project 11 92878327 92882764 - MGP_CBAJ_P0031037 Usp32 protein_coding protein_coding MGP_CBAJ_T0031038.1 MGP_CBAJ_G0018603.1 mouse_genomes_project 11 92929527 92944107 - MGP_CBAJ_P0031038 Usp32 protein_coding protein_coding MGP_CBAJ_T0031039.1 MGP_CBAJ_G0018603.1 mouse_genomes_project 11 92939192 92946992 - MGP_CBAJ_P0031039 Usp32 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031040.1 MGP_CBAJ_G0018603.1 mouse_genomes_project 11 92952316 92960615 - Usp32 protein_coding retained_intron MGP_CBAJ_T0031041.1 MGP_CBAJ_G0018603.1 mouse_genomes_project 11 92986575 93050056 - Usp32 protein_coding processed_transcript MGP_CBAJ_T0031042.1 MGP_CBAJ_G0018603.1 mouse_genomes_project 11 93005632 93049863 - Usp32 protein_coding processed_transcript MGP_CBAJ_T0031043.1 MGP_CBAJ_G0018603.1 mouse_genomes_project 11 93009105 93049824 - Usp32 protein_coding retained_intron MGP_CBAJ_T0003274.1 MGP_CBAJ_G0003021.1 mouse_genomes_project 11 129275266 129279121 - Gm29292 antisense antisense MGP_CBAJ_T0032454.1 MGP_CBAJ_G0018965.1 mouse_genomes_project 11 113659834 113662026 + MGP_CBAJ_P0032454 Higd1b protein_coding protein_coding MGP_CBAJ_T0032455.1 MGP_CBAJ_G0018965.1 mouse_genomes_project 11 113660281 113662026 + MGP_CBAJ_P0032455 Higd1b protein_coding protein_coding MGP_CBAJ_T0032456.1 MGP_CBAJ_G0018965.1 mouse_genomes_project 11 113660431 113662026 + MGP_CBAJ_P0032456 Higd1b protein_coding protein_coding MGP_CBAJ_T0012555.1 MGP_CBAJ_G0010667.1 mouse_genomes_project 11 99197775 99198315 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031417.1 MGP_CBAJ_G0018692.1 mouse_genomes_project 11 103936703 103950475 - MGP_CBAJ_P0031417 Xylt2 protein_coding protein_coding MGP_CBAJ_T0031418.1 MGP_CBAJ_G0018692.1 mouse_genomes_project 11 103937439 103950475 - MGP_CBAJ_P0031418 Xylt2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031419.1 MGP_CBAJ_G0018692.1 mouse_genomes_project 11 103939058 103941026 - MGP_CBAJ_P0031419 Xylt2 protein_coding protein_coding MGP_CBAJ_T0031420.1 MGP_CBAJ_G0018692.1 mouse_genomes_project 11 103939703 103940636 - Xylt2 protein_coding retained_intron MGP_CBAJ_T0031421.1 MGP_CBAJ_G0018692.1 mouse_genomes_project 11 103941358 103950367 - MGP_CBAJ_P0031421 Xylt2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031422.1 MGP_CBAJ_G0018692.1 mouse_genomes_project 11 103948920 103950373 - Xylt2 protein_coding processed_transcript MGP_CBAJ_T0031925.1 MGP_CBAJ_G0018840.1 mouse_genomes_project 11 109886116 109890079 - MGP_CBAJ_P0031925 Krtap4-6 protein_coding protein_coding MGP_CBAJ_T0030057.1 MGP_CBAJ_G0018346.1 mouse_genomes_project 11 77050086 77073058 - MGP_CBAJ_P0030057 Dhx33 protein_coding protein_coding MGP_CBAJ_T0030058.1 MGP_CBAJ_G0018346.1 mouse_genomes_project 11 77052506 77059970 - MGP_CBAJ_P0030058 Dhx33 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030059.1 MGP_CBAJ_G0018346.1 mouse_genomes_project 11 77052747 77073041 - MGP_CBAJ_P0030059 Dhx33 protein_coding protein_coding MGP_CBAJ_T0030060.1 MGP_CBAJ_G0018346.1 mouse_genomes_project 11 77052747 77072961 - MGP_CBAJ_P0030060 Dhx33 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030061.1 MGP_CBAJ_G0018346.1 mouse_genomes_project 11 77057704 77061178 - Dhx33 protein_coding retained_intron MGP_CBAJ_T0030062.1 MGP_CBAJ_G0018346.1 mouse_genomes_project 11 77058114 77061983 - MGP_CBAJ_P0030062 Dhx33 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030063.1 MGP_CBAJ_G0018346.1 mouse_genomes_project 11 77059099 77060007 - Dhx33 protein_coding retained_intron MGP_CBAJ_T0030064.1 MGP_CBAJ_G0018346.1 mouse_genomes_project 11 77061205 77066907 - Dhx33 protein_coding processed_transcript MGP_CBAJ_T0030065.1 MGP_CBAJ_G0018346.1 mouse_genomes_project 11 77065113 77073058 - Dhx33 protein_coding retained_intron MGP_CBAJ_T0031895.1 MGP_CBAJ_G0018813.1 mouse_genomes_project 11 109495566 109503010 - MGP_CBAJ_P0031895 Krt25 protein_coding protein_coding MGP_CBAJ_T0029873.1 MGP_CBAJ_G0018310.1 mouse_genomes_project 11 76143555 76147762 - MGP_CBAJ_P0029873 Slc16a13 protein_coding protein_coding MGP_CBAJ_T0029874.1 MGP_CBAJ_G0018310.1 mouse_genomes_project 11 76145504 76147576 - MGP_CBAJ_P0029874 Slc16a13 protein_coding protein_coding MGP_CBAJ_T0029875.1 MGP_CBAJ_G0018310.1 mouse_genomes_project 11 76145942 76147832 - MGP_CBAJ_P0029875 Slc16a13 protein_coding protein_coding MGP_CBAJ_T0029876.1 MGP_CBAJ_G0018310.1 mouse_genomes_project 11 76146055 76147552 - MGP_CBAJ_P0029876 Slc16a13 protein_coding protein_coding MGP_CBAJ_T0098709.1 MGP_CBAJ_G0036964.1 mouse_genomes_project 11 91226971 91227078 + Gm23247 snRNA snRNA MGP_CBAJ_T0032527.1 MGP_CBAJ_G0018981.1 mouse_genomes_project 11 114137791 114190386 - MGP_CBAJ_P0032527 Map3k14 protein_coding protein_coding MGP_CBAJ_T0032528.1 MGP_CBAJ_G0018981.1 mouse_genomes_project 11 114138834 114139884 - Map3k14 protein_coding processed_transcript MGP_CBAJ_T0032529.1 MGP_CBAJ_G0018981.1 mouse_genomes_project 11 114159931 114165195 - Map3k14 protein_coding processed_transcript MGP_CBAJ_T0032530.1 MGP_CBAJ_G0018981.1 mouse_genomes_project 11 114162235 114163036 - Map3k14 protein_coding processed_transcript MGP_CBAJ_T0000310.1 MGP_CBAJ_G0000255.1 mouse_genomes_project 11 46602083 46602136 - mt-Tk Mt_tRNA Mt_tRNA MGP_CBAJ_T0027590.1 MGP_CBAJ_G0017733.1 mouse_genomes_project 11 3192435 3196140 - MGP_CBAJ_P0027590 Mrps24 protein_coding protein_coding MGP_CBAJ_T0027591.1 MGP_CBAJ_G0017733.1 mouse_genomes_project 11 3192778 3196120 - Mrps24 protein_coding retained_intron MGP_CBAJ_T0027592.1 MGP_CBAJ_G0017733.1 mouse_genomes_project 11 3192975 3205228 - Mrps24 protein_coding processed_transcript MGP_CBAJ_T0027593.1 MGP_CBAJ_G0017733.1 mouse_genomes_project 11 3193007 3196143 - Mrps24 protein_coding retained_intron MGP_CBAJ_T0027594.1 MGP_CBAJ_G0017733.1 mouse_genomes_project 11 3193112 3196095 - Mrps24 protein_coding retained_intron MGP_CBAJ_T0031939.1 MGP_CBAJ_G0018854.1 mouse_genomes_project 11 110345533 110353000 - MGP_CBAJ_P0031939 Krt33a protein_coding protein_coding MGP_CBAJ_T0012524.1 MGP_CBAJ_G0010636.1 mouse_genomes_project 11 84559883 84560650 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0028873.1 MGP_CBAJ_G0018062.1 mouse_genomes_project 11 61565862 61607183 - MGP_CBAJ_P0028873 Fam114a2 protein_coding protein_coding MGP_CBAJ_T0028874.1 MGP_CBAJ_G0018062.1 mouse_genomes_project 11 61566665 61607169 - MGP_CBAJ_P0028874 Fam114a2 protein_coding protein_coding MGP_CBAJ_T0028875.1 MGP_CBAJ_G0018062.1 mouse_genomes_project 11 61593946 61595974 - Fam114a2 protein_coding processed_transcript MGP_CBAJ_T0028876.1 MGP_CBAJ_G0018062.1 mouse_genomes_project 11 61595920 61607168 - Fam114a2 protein_coding processed_transcript MGP_CBAJ_T0033288.1 MGP_CBAJ_G0019144.1 mouse_genomes_project 11 128975673 128994459 - Exoc7 protein_coding processed_transcript MGP_CBAJ_T0033289.1 MGP_CBAJ_G0019144.1 mouse_genomes_project 11 128975673 128994459 - MGP_CBAJ_P0033289 Exoc7 protein_coding protein_coding MGP_CBAJ_T0033290.1 MGP_CBAJ_G0019144.1 mouse_genomes_project 11 128975673 128994459 - MGP_CBAJ_P0033290 Exoc7 protein_coding protein_coding MGP_CBAJ_T0033291.1 MGP_CBAJ_G0019144.1 mouse_genomes_project 11 128975673 128994459 - MGP_CBAJ_P0033291 Exoc7 protein_coding protein_coding MGP_CBAJ_T0033292.1 MGP_CBAJ_G0019144.1 mouse_genomes_project 11 128976735 128978141 - Exoc7 protein_coding processed_transcript MGP_CBAJ_T0033293.1 MGP_CBAJ_G0019144.1 mouse_genomes_project 11 128976781 128979131 - Exoc7 protein_coding processed_transcript MGP_CBAJ_T0033294.1 MGP_CBAJ_G0019144.1 mouse_genomes_project 11 128980232 128985463 - Exoc7 protein_coding processed_transcript MGP_CBAJ_T0033295.1 MGP_CBAJ_G0019144.1 mouse_genomes_project 11 128983376 128994377 - MGP_CBAJ_P0033295 Exoc7 protein_coding protein_coding MGP_CBAJ_T0033296.1 MGP_CBAJ_G0019144.1 mouse_genomes_project 11 128992337 128994452 - MGP_CBAJ_P0033296 Exoc7 protein_coding protein_coding MGP_CBAJ_T0033297.1 MGP_CBAJ_G0019144.1 mouse_genomes_project 11 128992756 128994958 - MGP_CBAJ_P0033297 Exoc7 protein_coding protein_coding MGP_CBAJ_T0027843.1 MGP_CBAJ_G0017796.1 mouse_genomes_project 11 19736347 19863900 + MGP_CBAJ_P0027843 Sertad2 protein_coding protein_coding MGP_CBAJ_T0027844.1 MGP_CBAJ_G0017796.1 mouse_genomes_project 11 19842912 19863900 + MGP_CBAJ_P0027844 Sertad2 protein_coding protein_coding MGP_CBAJ_T0027845.1 MGP_CBAJ_G0017796.1 mouse_genomes_project 11 19858032 19859943 + MGP_CBAJ_P0027845 Sertad2 protein_coding protein_coding MGP_CBAJ_T0006275.1 MGP_CBAJ_G0005224.1 mouse_genomes_project 11 129823481 129831459 - Gm11728 lincRNA lincRNA MGP_CBAJ_T0006276.1 MGP_CBAJ_G0005224.1 mouse_genomes_project 11 129829793 129831454 - Gm11728 lincRNA lincRNA MGP_CBAJ_T0027446.1 MGP_CBAJ_G0017702.1 mouse_genomes_project 11 1325787 1329755 - MGP_CBAJ_P0027446 Mtfp1 protein_coding protein_coding MGP_CBAJ_T0027447.1 MGP_CBAJ_G0017702.1 mouse_genomes_project 11 1328741 1329448 - Mtfp1 protein_coding processed_transcript MGP_CBAJ_T0030237.1 MGP_CBAJ_G0018399.1 mouse_genomes_project 11 80179190 80181953 - MGP_CBAJ_P0030237 Olfr392 protein_coding protein_coding MGP_CBAJ_T0030238.1 MGP_CBAJ_G0018399.1 mouse_genomes_project 11 80179804 80181950 - MGP_CBAJ_P0030238 Olfr392 protein_coding protein_coding MGP_CBAJ_T0028887.1 MGP_CBAJ_G0018067.1 mouse_genomes_project 11 62098032 62098607 - MGP_CBAJ_P0028887 Bex4 protein_coding protein_coding MGP_CBAJ_T0098713.1 MGP_CBAJ_G0036968.1 mouse_genomes_project 11 95446028 95446134 - Gm22883 snRNA snRNA MGP_CBAJ_T0030897.1 MGP_CBAJ_G0018565.1 mouse_genomes_project 11 90772111 90777933 + MGP_CBAJ_P0030897 Slfn1 protein_coding protein_coding MGP_CBAJ_T0012601.1 MGP_CBAJ_G0010713.1 mouse_genomes_project 11 120418139 120418563 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0033064.1 MGP_CBAJ_G0019106.1 mouse_genomes_project 11 127932778 127935112 - Atp5h protein_coding processed_transcript MGP_CBAJ_T0033065.1 MGP_CBAJ_G0019106.1 mouse_genomes_project 11 127932778 127934108 - Atp5h protein_coding processed_transcript MGP_CBAJ_T0033066.1 MGP_CBAJ_G0019106.1 mouse_genomes_project 11 127932778 127937064 - MGP_CBAJ_P0033066 Atp5h protein_coding protein_coding MGP_CBAJ_T0033067.1 MGP_CBAJ_G0019106.1 mouse_genomes_project 11 127932778 127937019 - MGP_CBAJ_P0033067 Atp5h protein_coding protein_coding MGP_CBAJ_T0033068.1 MGP_CBAJ_G0019106.1 mouse_genomes_project 11 127932778 127937064 - MGP_CBAJ_P0033068 Atp5h protein_coding protein_coding MGP_CBAJ_T0033069.1 MGP_CBAJ_G0019106.1 mouse_genomes_project 11 127932837 127935597 - MGP_CBAJ_P0033069 Atp5h protein_coding protein_coding MGP_CBAJ_T0033070.1 MGP_CBAJ_G0019106.1 mouse_genomes_project 11 127932907 127935831 - MGP_CBAJ_P0033070 Atp5h protein_coding protein_coding MGP_CBAJ_T0033071.1 MGP_CBAJ_G0019106.1 mouse_genomes_project 11 127933942 127936163 - Atp5h protein_coding processed_transcript MGP_CBAJ_T0033720.1 MGP_CBAJ_G0019228.1 mouse_genomes_project 11 133836619 133843464 - Fam195b protein_coding processed_transcript MGP_CBAJ_T0033721.1 MGP_CBAJ_G0019228.1 mouse_genomes_project 11 133836619 133843490 - MGP_CBAJ_P0033721 Fam195b protein_coding protein_coding MGP_CBAJ_T0012357.1 MGP_CBAJ_G0010469.1 mouse_genomes_project 11 18673878 18674996 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012569.1 MGP_CBAJ_G0010681.1 mouse_genomes_project 11 107844587 107845031 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009624.1 MGP_CBAJ_G0007762.1 mouse_genomes_project 11 108155194 108155272 + Gm27399 miRNA miRNA MGP_CBAJ_T0027503.1 MGP_CBAJ_G0017718.1 mouse_genomes_project 11 2094020 2185269 - MGP_CBAJ_P0027503 Nf2 protein_coding protein_coding MGP_CBAJ_T0027504.1 MGP_CBAJ_G0017718.1 mouse_genomes_project 11 2094020 2185820 - MGP_CBAJ_P0027504 Nf2 protein_coding protein_coding MGP_CBAJ_T0027505.1 MGP_CBAJ_G0017718.1 mouse_genomes_project 11 2096104 2112763 - Nf2 protein_coding retained_intron MGP_CBAJ_T0027506.1 MGP_CBAJ_G0017718.1 mouse_genomes_project 11 2109592 2169542 - Nf2 protein_coding processed_transcript MGP_CBAJ_T0027507.1 MGP_CBAJ_G0017718.1 mouse_genomes_project 11 2112091 2149564 - MGP_CBAJ_P0027507 Nf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027508.1 MGP_CBAJ_G0017718.1 mouse_genomes_project 11 2118856 2185478 - MGP_CBAJ_P0027508 Nf2 protein_coding protein_coding MGP_CBAJ_T0027509.1 MGP_CBAJ_G0017718.1 mouse_genomes_project 11 2122086 2148639 - Nf2 protein_coding processed_transcript MGP_CBAJ_T0027510.1 MGP_CBAJ_G0017718.1 mouse_genomes_project 11 2122135 2151946 - MGP_CBAJ_P0027510 Nf2 protein_coding protein_coding MGP_CBAJ_T0027511.1 MGP_CBAJ_G0017718.1 mouse_genomes_project 11 2127516 2153795 - MGP_CBAJ_P0027511 Nf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027512.1 MGP_CBAJ_G0017718.1 mouse_genomes_project 11 2151903 2161449 - Nf2 protein_coding processed_transcript MGP_CBAJ_T0027513.1 MGP_CBAJ_G0017718.1 mouse_genomes_project 11 2166371 2185409 - MGP_CBAJ_P0027513 Nf2 protein_coding protein_coding MGP_CBAJ_T0027964.1 MGP_CBAJ_G0017822.1 mouse_genomes_project 11 23488138 23527348 - MGP_CBAJ_P0027964 Papolg protein_coding protein_coding MGP_CBAJ_T0027965.1 MGP_CBAJ_G0017822.1 mouse_genomes_project 11 23490736 23493963 - MGP_CBAJ_P0027965 Papolg protein_coding protein_coding MGP_CBAJ_T0027966.1 MGP_CBAJ_G0017822.1 mouse_genomes_project 11 23491903 23523999 - Papolg protein_coding processed_transcript MGP_CBAJ_T0027967.1 MGP_CBAJ_G0017822.1 mouse_genomes_project 11 23495550 23527331 - MGP_CBAJ_P0027967 Papolg protein_coding protein_coding MGP_CBAJ_T0006083.1 MGP_CBAJ_G0005072.1 mouse_genomes_project 11 5065076 5085707 - Gm11986 lincRNA lincRNA MGP_CBAJ_T0027426.1 MGP_CBAJ_G0017697.1 mouse_genomes_project 11 1136843 1178044 - MGP_CBAJ_P0027426 4930556J24Rik protein_coding protein_coding MGP_CBAJ_T0032190.1 MGP_CBAJ_G0018919.1 mouse_genomes_project 11 111973466 111986684 - MGP_CBAJ_P0032190 Aarsd1 protein_coding protein_coding MGP_CBAJ_T0032192.1 MGP_CBAJ_G0018919.1 mouse_genomes_project 11 111977427 111986453 - Aarsd1 protein_coding processed_transcript MGP_CBAJ_T0032193.1 MGP_CBAJ_G0018919.1 mouse_genomes_project 11 111978028 111986451 - Aarsd1 protein_coding retained_intron MGP_CBAJ_T0032194.1 MGP_CBAJ_G0018919.1 mouse_genomes_project 11 111980226 111981043 - Aarsd1 protein_coding retained_intron MGP_CBAJ_T0032195.1 MGP_CBAJ_G0018919.1 mouse_genomes_project 11 111985816 111986475 - Aarsd1 protein_coding retained_intron MGP_CBAJ_T0030653.1 MGP_CBAJ_G0018497.1 mouse_genomes_project 11 85345889 85371407 + MGP_CBAJ_P0030653 Spag5 protein_coding protein_coding MGP_CBAJ_T0030654.1 MGP_CBAJ_G0018497.1 mouse_genomes_project 11 85345984 85364213 + Spag5 protein_coding retained_intron MGP_CBAJ_T0030655.1 MGP_CBAJ_G0018497.1 mouse_genomes_project 11 85346015 85363886 + Spag5 protein_coding retained_intron MGP_CBAJ_T0030656.1 MGP_CBAJ_G0018497.1 mouse_genomes_project 11 85362137 85363107 + Spag5 protein_coding retained_intron MGP_CBAJ_T0030657.1 MGP_CBAJ_G0018497.1 mouse_genomes_project 11 85364379 85364991 + Spag5 protein_coding retained_intron MGP_CBAJ_T0030658.1 MGP_CBAJ_G0018497.1 mouse_genomes_project 11 85364849 85368848 + Spag5 protein_coding retained_intron MGP_CBAJ_T0030659.1 MGP_CBAJ_G0018497.1 mouse_genomes_project 11 85366911 85369325 + Spag5 protein_coding processed_transcript MGP_CBAJ_T0030660.1 MGP_CBAJ_G0018497.1 mouse_genomes_project 11 85368875 85369690 + Spag5 protein_coding retained_intron MGP_CBAJ_T0009622.1 MGP_CBAJ_G0007760.1 mouse_genomes_project 11 107810178 107810248 - Gm22461 miRNA miRNA MGP_CBAJ_T0032863.1 MGP_CBAJ_G0019056.1 mouse_genomes_project 11 121383876 121430716 - MGP_CBAJ_P0032863 Wipi1 protein_coding protein_coding MGP_CBAJ_T0032864.1 MGP_CBAJ_G0019056.1 mouse_genomes_project 11 121383913 121430663 - MGP_CBAJ_P0032864 Wipi1 protein_coding unknown_likely_coding MGP_CBAJ_T0032865.1 MGP_CBAJ_G0019056.1 mouse_genomes_project 11 121385677 121430716 - MGP_CBAJ_P0032865 Wipi1 protein_coding protein_coding MGP_CBAJ_T0032866.1 MGP_CBAJ_G0019056.1 mouse_genomes_project 11 121392624 121430716 - MGP_CBAJ_P0032866 Wipi1 protein_coding protein_coding MGP_CBAJ_T0032867.1 MGP_CBAJ_G0019056.1 mouse_genomes_project 11 121430522 121431251 - Wipi1 protein_coding processed_transcript MGP_CBAJ_T0027771.1 MGP_CBAJ_G0017777.1 mouse_genomes_project 11 10239502 10301981 - MGP_CBAJ_P0027771 Grb10 protein_coding protein_coding MGP_CBAJ_T0027772.1 MGP_CBAJ_G0017777.1 mouse_genomes_project 11 10245729 10247628 - Grb10 protein_coding processed_transcript MGP_CBAJ_T0027773.1 MGP_CBAJ_G0017777.1 mouse_genomes_project 11 10253909 10255350 - Grb10 protein_coding processed_transcript MGP_CBAJ_T0027774.1 MGP_CBAJ_G0017777.1 mouse_genomes_project 11 10258619 10265043 - Grb10 protein_coding processed_transcript MGP_CBAJ_T0027775.1 MGP_CBAJ_G0017777.1 mouse_genomes_project 11 10263762 10349525 - MGP_CBAJ_P0027775 Grb10 protein_coding protein_coding MGP_CBAJ_T0027776.1 MGP_CBAJ_G0017777.1 mouse_genomes_project 11 10276549 10336752 - MGP_CBAJ_P0027776 Grb10 protein_coding protein_coding MGP_CBAJ_T0027777.1 MGP_CBAJ_G0017777.1 mouse_genomes_project 11 10276643 10337160 - MGP_CBAJ_P0027777 Grb10 protein_coding protein_coding MGP_CBAJ_T0030854.1 MGP_CBAJ_G0018554.1 mouse_genomes_project 11 90304631 90306222 + MGP_CBAJ_P0030854 Zfp830 protein_coding protein_coding MGP_CBAJ_T0012592.1 MGP_CBAJ_G0010704.1 mouse_genomes_project 11 116215673 116216713 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0033249.1 MGP_CBAJ_G0019136.1 mouse_genomes_project 11 128784004 128793278 - MGP_CBAJ_P0033249 Trim65 protein_coding protein_coding MGP_CBAJ_T0033250.1 MGP_CBAJ_G0019136.1 mouse_genomes_project 11 128786861 128793282 - Trim65 protein_coding processed_transcript MGP_CBAJ_T0033251.1 MGP_CBAJ_G0019136.1 mouse_genomes_project 11 128786861 128793280 - MGP_CBAJ_P0033251 Trim65 protein_coding protein_coding MGP_CBAJ_T0003070.1 MGP_CBAJ_G0002853.1 mouse_genomes_project 11 37254079 37260469 + antisense antisense MGP_CBAJ_T0029997.1 MGP_CBAJ_G0018337.1 mouse_genomes_project 11 76676930 76695390 - MGP_CBAJ_P0029997 Camta2 protein_coding protein_coding MGP_CBAJ_T0029998.1 MGP_CBAJ_G0018337.1 mouse_genomes_project 11 76676930 76695361 - MGP_CBAJ_P0029998 Camta2 protein_coding protein_coding MGP_CBAJ_T0029999.1 MGP_CBAJ_G0018337.1 mouse_genomes_project 11 76676930 76693807 - MGP_CBAJ_P0029999 Camta2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0030000.1 MGP_CBAJ_G0018337.1 mouse_genomes_project 11 76676930 76695361 - MGP_CBAJ_P0030000 Camta2 protein_coding protein_coding MGP_CBAJ_T0030001.1 MGP_CBAJ_G0018337.1 mouse_genomes_project 11 76676930 76695523 - MGP_CBAJ_P0030001 Camta2 protein_coding protein_coding MGP_CBAJ_T0030002.1 MGP_CBAJ_G0018337.1 mouse_genomes_project 11 76676930 76695371 - MGP_CBAJ_P0030002 Camta2 protein_coding protein_coding MGP_CBAJ_T0030003.1 MGP_CBAJ_G0018337.1 mouse_genomes_project 11 76676931 76695373 - MGP_CBAJ_P0030003 Camta2 protein_coding protein_coding MGP_CBAJ_T0030004.1 MGP_CBAJ_G0018337.1 mouse_genomes_project 11 76676933 76691194 - Camta2 protein_coding retained_intron MGP_CBAJ_T0030005.1 MGP_CBAJ_G0018337.1 mouse_genomes_project 11 76693331 76695366 - Camta2 protein_coding retained_intron MGP_CBAJ_T0030201.1 MGP_CBAJ_G0018382.1 mouse_genomes_project 11 79479073 79503943 + MGP_CBAJ_P0030201 Shpk protein_coding protein_coding MGP_CBAJ_T0030202.1 MGP_CBAJ_G0018382.1 mouse_genomes_project 11 79479073 79503934 + MGP_CBAJ_P0030202 Shpk protein_coding nonsense_mediated_decay MGP_CBAJ_T0028243.1 MGP_CBAJ_G0017890.1 mouse_genomes_project 11 42494447 42500821 + MGP_CBAJ_P0028243 Nudcd2 protein_coding protein_coding MGP_CBAJ_T0028244.1 MGP_CBAJ_G0017890.1 mouse_genomes_project 11 42494524 42497193 + Nudcd2 protein_coding processed_transcript MGP_CBAJ_T0028245.1 MGP_CBAJ_G0017890.1 mouse_genomes_project 11 42494726 42500325 + MGP_CBAJ_P0028245 Nudcd2 protein_coding protein_coding MGP_CBAJ_T0028246.1 MGP_CBAJ_G0017890.1 mouse_genomes_project 11 42494985 42500258 + Nudcd2 protein_coding processed_transcript MGP_CBAJ_T0028247.1 MGP_CBAJ_G0017890.1 mouse_genomes_project 11 42497086 42500039 + Nudcd2 protein_coding processed_transcript MGP_CBAJ_T0003288.1 MGP_CBAJ_G0003034.1 mouse_genomes_project 11 133818020 133824323 - Gm11789 antisense antisense MGP_CBAJ_T0003289.1 MGP_CBAJ_G0003034.1 mouse_genomes_project 11 133818046 133825257 - Gm11789 antisense antisense MGP_CBAJ_T0003290.1 MGP_CBAJ_G0003034.1 mouse_genomes_project 11 133818072 133825553 - Gm11789 antisense antisense MGP_CBAJ_T0003291.1 MGP_CBAJ_G0003034.1 mouse_genomes_project 11 133822032 133825282 - Gm11789 antisense antisense MGP_CBAJ_T0003292.1 MGP_CBAJ_G0003034.1 mouse_genomes_project 11 133823977 133825266 - Gm11789 antisense antisense MGP_CBAJ_T0012383.1 MGP_CBAJ_G0010495.1 mouse_genomes_project 11 26780028 26794017 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097908.1 MGP_CBAJ_G0036181.1 mouse_genomes_project 11 80741998 80742117 + n-R5s71 rRNA rRNA MGP_CBAJ_T0003130.1 MGP_CBAJ_G0002906.1 mouse_genomes_project 11 67811771 67812426 - Cdrt4os2 antisense antisense MGP_CBAJ_T0003106.1 MGP_CBAJ_G0002886.1 mouse_genomes_project 11 63183361 63185200 + Gm12256 antisense antisense MGP_CBAJ_T0009630.1 MGP_CBAJ_G0007768.1 mouse_genomes_project 11 111988255 111988322 - Mir6929 miRNA miRNA MGP_CBAJ_T0033812.1 MGP_CBAJ_G0019245.1 mouse_genomes_project 11 134032097 134033961 - MGP_CBAJ_P0033812 Dcxr protein_coding protein_coding MGP_CBAJ_T0033813.1 MGP_CBAJ_G0019245.1 mouse_genomes_project 11 134032097 134033923 - MGP_CBAJ_P0033813 Dcxr protein_coding protein_coding MGP_CBAJ_T0033814.1 MGP_CBAJ_G0019245.1 mouse_genomes_project 11 134032123 134033924 - Dcxr protein_coding retained_intron MGP_CBAJ_T0033815.1 MGP_CBAJ_G0019245.1 mouse_genomes_project 11 134032153 134033909 - Dcxr protein_coding processed_transcript MGP_CBAJ_T0006289.1 MGP_CBAJ_G0005235.1 mouse_genomes_project 11 133143713 133147277 + Gm11766 lincRNA lincRNA MGP_CBAJ_T0012519.1 MGP_CBAJ_G0010631.1 mouse_genomes_project 11 83278073 83279340 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0027356.1 MGP_CBAJ_G0017684.1 mouse_genomes_project 11 416414 428951 + MGP_CBAJ_P0027356 Pik3ip1 protein_coding protein_coding MGP_CBAJ_T0027357.1 MGP_CBAJ_G0017684.1 mouse_genomes_project 11 416741 418118 + Pik3ip1 protein_coding retained_intron MGP_CBAJ_T0027358.1 MGP_CBAJ_G0017684.1 mouse_genomes_project 11 416800 427663 + MGP_CBAJ_P0027358 Pik3ip1 protein_coding protein_coding MGP_CBAJ_T0027359.1 MGP_CBAJ_G0017684.1 mouse_genomes_project 11 416806 419977 + Pik3ip1 protein_coding retained_intron MGP_CBAJ_T0027360.1 MGP_CBAJ_G0017684.1 mouse_genomes_project 11 416821 419979 + MGP_CBAJ_P0027360 Pik3ip1 protein_coding protein_coding MGP_CBAJ_T0027361.1 MGP_CBAJ_G0017684.1 mouse_genomes_project 11 418086 419694 + Pik3ip1 protein_coding retained_intron MGP_CBAJ_T0027362.1 MGP_CBAJ_G0017684.1 mouse_genomes_project 11 418123 427654 + MGP_CBAJ_P0027362 Pik3ip1 protein_coding protein_coding MGP_CBAJ_T0027363.1 MGP_CBAJ_G0017684.1 mouse_genomes_project 11 418465 427672 + MGP_CBAJ_P0027363 Pik3ip1 protein_coding protein_coding MGP_CBAJ_T0027364.1 MGP_CBAJ_G0017684.1 mouse_genomes_project 11 418986 419975 + Pik3ip1 protein_coding processed_transcript MGP_CBAJ_T0027365.1 MGP_CBAJ_G0017684.1 mouse_genomes_project 11 420395 427985 + Pik3ip1 protein_coding processed_transcript MGP_CBAJ_T0033222.1 MGP_CBAJ_G0019132.1 mouse_genomes_project 11 128679103 128713512 + MGP_CBAJ_P0033222 Unk protein_coding protein_coding MGP_CBAJ_T0033223.1 MGP_CBAJ_G0019132.1 mouse_genomes_project 11 128679103 128713512 + MGP_CBAJ_P0033223 Unk protein_coding protein_coding MGP_CBAJ_T0033224.1 MGP_CBAJ_G0019132.1 mouse_genomes_project 11 128679104 128693013 + Unk protein_coding processed_transcript MGP_CBAJ_T0033225.1 MGP_CBAJ_G0019132.1 mouse_genomes_project 11 128689778 128713512 + Unk protein_coding processed_transcript MGP_CBAJ_T0033226.1 MGP_CBAJ_G0019132.1 mouse_genomes_project 11 128701270 128705659 + Unk protein_coding retained_intron MGP_CBAJ_T0033227.1 MGP_CBAJ_G0019132.1 mouse_genomes_project 11 128705276 128708339 + Unk protein_coding retained_intron MGP_CBAJ_T0033228.1 MGP_CBAJ_G0019132.1 mouse_genomes_project 11 128708169 128711355 + Unk protein_coding retained_intron MGP_CBAJ_T0027638.1 MGP_CBAJ_G0017744.1 mouse_genomes_project 11 3689598 3782804 - MGP_CBAJ_P0027638 Nudcd3 protein_coding protein_coding MGP_CBAJ_T0027639.1 MGP_CBAJ_G0017744.1 mouse_genomes_project 11 3689893 3703317 - Nudcd3 protein_coding processed_transcript MGP_CBAJ_T0027640.1 MGP_CBAJ_G0017744.1 mouse_genomes_project 11 3690365 3775715 - MGP_CBAJ_P0027640 Nudcd3 protein_coding protein_coding MGP_CBAJ_T0027641.1 MGP_CBAJ_G0017744.1 mouse_genomes_project 11 3706829 3775715 - Nudcd3 protein_coding retained_intron MGP_CBAJ_T0030334.1 MGP_CBAJ_G0018432.1 mouse_genomes_project 11 81902580 81963667 + MGP_CBAJ_P0030334 Smyd4 protein_coding protein_coding MGP_CBAJ_T0030335.1 MGP_CBAJ_G0018432.1 mouse_genomes_project 11 81902642 81937455 + Smyd4 protein_coding retained_intron MGP_CBAJ_T0030336.1 MGP_CBAJ_G0018432.1 mouse_genomes_project 11 81943028 81946232 + Smyd4 protein_coding processed_transcript MGP_CBAJ_T0030337.1 MGP_CBAJ_G0018432.1 mouse_genomes_project 11 81957524 81958549 + Smyd4 protein_coding processed_transcript MGP_CBAJ_T0033774.1 MGP_CBAJ_G0019240.1 mouse_genomes_project 11 133955406 133962249 - MGP_CBAJ_P0033774 Notum protein_coding protein_coding MGP_CBAJ_T0033775.1 MGP_CBAJ_G0019240.1 mouse_genomes_project 11 133955406 133962472 - MGP_CBAJ_P0033775 Notum protein_coding protein_coding MGP_CBAJ_T0033776.1 MGP_CBAJ_G0019240.1 mouse_genomes_project 11 133955463 133959687 - Notum protein_coding retained_intron MGP_CBAJ_T0033777.1 MGP_CBAJ_G0019240.1 mouse_genomes_project 11 133959205 133962818 - MGP_CBAJ_P0033777 Notum protein_coding protein_coding MGP_CBAJ_T0031517.1 MGP_CBAJ_G0018720.1 mouse_genomes_project 11 105521958 105528148 + MGP_CBAJ_P0031517 Gip protein_coding protein_coding MGP_CBAJ_T0031518.1 MGP_CBAJ_G0018720.1 mouse_genomes_project 11 105522459 105528148 + MGP_CBAJ_P0031518 Gip protein_coding protein_coding MGP_CBAJ_T0101555.1 MGP_CBAJ_G0039587.1 mouse_genomes_project 11 103878542 103880213 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0030605.1 MGP_CBAJ_G0018488.1 mouse_genomes_project 11 85178619 85191777 - Nek8 protein_coding retained_intron MGP_CBAJ_T0030606.1 MGP_CBAJ_G0018488.1 mouse_genomes_project 11 85178619 85191841 - MGP_CBAJ_P0030606 Nek8 protein_coding protein_coding MGP_CBAJ_T0030607.1 MGP_CBAJ_G0018488.1 mouse_genomes_project 11 85178623 85179901 - Nek8 protein_coding retained_intron MGP_CBAJ_T0030608.1 MGP_CBAJ_G0018488.1 mouse_genomes_project 11 85179034 85191793 - Nek8 protein_coding retained_intron MGP_CBAJ_T0030609.1 MGP_CBAJ_G0018488.1 mouse_genomes_project 11 85179767 85180547 - Nek8 protein_coding retained_intron MGP_CBAJ_T0030610.1 MGP_CBAJ_G0018488.1 mouse_genomes_project 11 85181485 85182342 - Nek8 protein_coding retained_intron MGP_CBAJ_T0030611.1 MGP_CBAJ_G0018488.1 mouse_genomes_project 11 85182504 85191780 - Nek8 protein_coding retained_intron MGP_CBAJ_T0030612.1 MGP_CBAJ_G0018488.1 mouse_genomes_project 11 85183700 85191800 - MGP_CBAJ_P0030612 Nek8 protein_coding protein_coding MGP_CBAJ_T0029402.1 MGP_CBAJ_G0018205.1 mouse_genomes_project 11 71014065 71036102 + MGP_CBAJ_P0029402 Zkscan6 protein_coding protein_coding MGP_CBAJ_T0029403.1 MGP_CBAJ_G0018205.1 mouse_genomes_project 11 71014134 71036103 + MGP_CBAJ_P0029403 Zkscan6 protein_coding protein_coding MGP_CBAJ_T0097758.1 MGP_CBAJ_G0036031.1 mouse_genomes_project 11 125706122 125713006 + pseudogene pseudogene MGP_CBAJ_T0012338.1 MGP_CBAJ_G0010450.1 mouse_genomes_project 11 12639097 12639476 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0029922.1 MGP_CBAJ_G0018322.1 mouse_genomes_project 11 76409059 76409982 + MGP_CBAJ_P0029922 Zmynd15 protein_coding protein_coding MGP_CBAJ_T0029923.1 MGP_CBAJ_G0018322.1 mouse_genomes_project 11 76409256 76410016 + MGP_CBAJ_P0029923 Zmynd15 protein_coding protein_coding MGP_CBAJ_T0029924.1 MGP_CBAJ_G0018322.1 mouse_genomes_project 11 76409315 76415319 + Zmynd15 protein_coding retained_intron MGP_CBAJ_T0029925.1 MGP_CBAJ_G0018322.1 mouse_genomes_project 11 76409684 76415210 + MGP_CBAJ_P0029925 Zmynd15 protein_coding protein_coding MGP_CBAJ_T0029926.1 MGP_CBAJ_G0018322.1 mouse_genomes_project 11 76409689 76415206 + MGP_CBAJ_P0029926 Zmynd15 protein_coding protein_coding MGP_CBAJ_T0012397.1 MGP_CBAJ_G0010509.1 mouse_genomes_project 11 30316972 30317758 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006278.1 MGP_CBAJ_G0005226.1 mouse_genomes_project 11 129885656 129886324 + Snhg20 lincRNA lincRNA MGP_CBAJ_T0006279.1 MGP_CBAJ_G0005226.1 mouse_genomes_project 11 129885656 129887822 + Snhg20 lincRNA lincRNA MGP_CBAJ_T0006280.1 MGP_CBAJ_G0005226.1 mouse_genomes_project 11 129885668 129887821 + Snhg20 lincRNA lincRNA MGP_CBAJ_T0009543.1 MGP_CBAJ_G0007681.1 mouse_genomes_project 11 28976324 28976393 - Mir216c miRNA miRNA MGP_CBAJ_T0012446.1 MGP_CBAJ_G0010558.1 mouse_genomes_project 11 55521285 55521472 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0033617.1 MGP_CBAJ_G0019208.1 mouse_genomes_project 11 133220570 133263289 - Aatk protein_coding processed_transcript MGP_CBAJ_T0033618.1 MGP_CBAJ_G0019208.1 mouse_genomes_project 11 133220570 133225666 - Aatk protein_coding processed_transcript MGP_CBAJ_T0033619.1 MGP_CBAJ_G0019208.1 mouse_genomes_project 11 133220570 133263192 - MGP_CBAJ_P0033619 Aatk protein_coding protein_coding MGP_CBAJ_T0033620.1 MGP_CBAJ_G0019208.1 mouse_genomes_project 11 133222473 133239203 - MGP_CBAJ_P0033620 Aatk protein_coding protein_coding MGP_CBAJ_T0033621.1 MGP_CBAJ_G0019208.1 mouse_genomes_project 11 133225652 133233026 - Aatk protein_coding processed_transcript MGP_CBAJ_T0033622.1 MGP_CBAJ_G0019208.1 mouse_genomes_project 11 133226943 133233285 - Aatk protein_coding processed_transcript MGP_CBAJ_T0033623.1 MGP_CBAJ_G0019208.1 mouse_genomes_project 11 133228590 133233001 - Aatk protein_coding processed_transcript MGP_CBAJ_T0033624.1 MGP_CBAJ_G0019208.1 mouse_genomes_project 11 133232866 133236295 - Aatk protein_coding processed_transcript MGP_CBAJ_T0012449.1 MGP_CBAJ_G0010561.1 mouse_genomes_project 11 56872392 56872780 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0016962.1 MGP_CBAJ_G0014927.1 mouse_genomes_project 11 85337398 85338507 - Gm11193 processed_transcript processed_transcript MGP_CBAJ_T0033381.1 MGP_CBAJ_G0019161.1 mouse_genomes_project 11 129593205 129595784 + protein_coding retained_intron MGP_CBAJ_T0033382.1 MGP_CBAJ_G0019161.1 mouse_genomes_project 11 129593225 129599408 + MGP_CBAJ_P0033382 protein_coding unknown_likely_coding MGP_CBAJ_T0033383.1 MGP_CBAJ_G0019161.1 mouse_genomes_project 11 129593229 129595706 + protein_coding retained_intron MGP_CBAJ_T0033384.1 MGP_CBAJ_G0019161.1 mouse_genomes_project 11 129593319 129598018 + MGP_CBAJ_P0033384 protein_coding nonsense_mediated_decay MGP_CBAJ_T0101541.1 MGP_CBAJ_G0039573.1 mouse_genomes_project 11 64009479 64009854 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0029750.1 MGP_CBAJ_G0018288.1 mouse_genomes_project 11 75696801 75707159 - MGP_CBAJ_P0029750 Tnk1 protein_coding protein_coding MGP_CBAJ_T0029751.1 MGP_CBAJ_G0018288.1 mouse_genomes_project 11 75697015 75705521 - MGP_CBAJ_P0029751 Tnk1 protein_coding protein_coding MGP_CBAJ_T0029752.1 MGP_CBAJ_G0018288.1 mouse_genomes_project 11 75697871 75704034 - MGP_CBAJ_P0029752 Tnk1 protein_coding protein_coding MGP_CBAJ_T0029753.1 MGP_CBAJ_G0018288.1 mouse_genomes_project 11 75700278 75707159 - MGP_CBAJ_P0029753 Tnk1 protein_coding protein_coding MGP_CBAJ_T0029754.1 MGP_CBAJ_G0018288.1 mouse_genomes_project 11 75704012 75707137 - MGP_CBAJ_P0029754 Tnk1 protein_coding protein_coding MGP_CBAJ_T0028957.1 MGP_CBAJ_G0018101.1 mouse_genomes_project 11 63077143 63086461 - MGP_CBAJ_P0028957 Fam183b protein_coding protein_coding MGP_CBAJ_T0028958.1 MGP_CBAJ_G0018101.1 mouse_genomes_project 11 63077157 63086461 - MGP_CBAJ_P0028958 Fam183b protein_coding protein_coding MGP_CBAJ_T0006167.1 MGP_CBAJ_G0005147.1 mouse_genomes_project 11 69940587 69945209 - Gm12292 lincRNA lincRNA MGP_CBAJ_T0098700.1 MGP_CBAJ_G0036955.1 mouse_genomes_project 11 81221461 81221568 + Gm24211 snRNA snRNA MGP_CBAJ_T0029123.1 MGP_CBAJ_G0018148.1 mouse_genomes_project 11 65256044 65270473 + MGP_CBAJ_P0029123 Llgl1 protein_coding protein_coding MGP_CBAJ_T0029124.1 MGP_CBAJ_G0018148.1 mouse_genomes_project 11 65256166 65270473 + MGP_CBAJ_P0029124 Llgl1 protein_coding protein_coding MGP_CBAJ_T0029125.1 MGP_CBAJ_G0018148.1 mouse_genomes_project 11 65260500 65262376 + Llgl1 protein_coding retained_intron MGP_CBAJ_T0028751.1 MGP_CBAJ_G0018031.1 mouse_genomes_project 11 57398209 57399116 - MGP_CBAJ_P0028751 Gm17334 protein_coding protein_coding MGP_CBAJ_T0031017.1 MGP_CBAJ_G0018600.1 mouse_genomes_project 11 92736521 92773945 + MGP_CBAJ_P0031017 Myo19 protein_coding protein_coding MGP_CBAJ_T0031018.1 MGP_CBAJ_G0018600.1 mouse_genomes_project 11 92736543 92739365 + Myo19 protein_coding processed_transcript MGP_CBAJ_T0031019.1 MGP_CBAJ_G0018600.1 mouse_genomes_project 11 92736593 92770446 + Myo19 protein_coding processed_transcript MGP_CBAJ_T0031020.1 MGP_CBAJ_G0018600.1 mouse_genomes_project 11 92736683 92737377 + Myo19 protein_coding processed_transcript MGP_CBAJ_T0031021.1 MGP_CBAJ_G0018600.1 mouse_genomes_project 11 92736726 92770455 + Myo19 protein_coding processed_transcript MGP_CBAJ_T0031022.1 MGP_CBAJ_G0018600.1 mouse_genomes_project 11 92736740 92752705 + MGP_CBAJ_P0031022 Myo19 protein_coding protein_coding MGP_CBAJ_T0031023.1 MGP_CBAJ_G0018600.1 mouse_genomes_project 11 92738959 92770446 + Myo19 protein_coding processed_transcript MGP_CBAJ_T0028214.1 MGP_CBAJ_G0017883.1 mouse_genomes_project 11 36906267 36927967 + MGP_CBAJ_P0028214 Pank3 protein_coding protein_coding MGP_CBAJ_T0028699.1 MGP_CBAJ_G0018017.1 mouse_genomes_project 11 56974176 56977082 - MGP_CBAJ_P0028699 Uqcrq protein_coding protein_coding MGP_CBAJ_T0028700.1 MGP_CBAJ_G0018017.1 mouse_genomes_project 11 56975207 56977086 - Uqcrq protein_coding processed_transcript MGP_CBAJ_T0028701.1 MGP_CBAJ_G0018017.1 mouse_genomes_project 11 56975207 56977082 - MGP_CBAJ_P0028701 Uqcrq protein_coding protein_coding MGP_CBAJ_T0028702.1 MGP_CBAJ_G0018017.1 mouse_genomes_project 11 56975207 56976689 - MGP_CBAJ_P0028702 Uqcrq protein_coding protein_coding MGP_CBAJ_T0097757.1 MGP_CBAJ_G0036030.1 mouse_genomes_project 11 79693963 79694913 - pseudogene pseudogene MGP_CBAJ_T0029098.1 MGP_CBAJ_G0018142.1 mouse_genomes_project 11 64860995 64880003 + MGP_CBAJ_P0029098 Lrrc48 protein_coding protein_coding MGP_CBAJ_T0029099.1 MGP_CBAJ_G0018142.1 mouse_genomes_project 11 64860995 64902560 + MGP_CBAJ_P0029099 Lrrc48 protein_coding protein_coding MGP_CBAJ_T0029100.1 MGP_CBAJ_G0018142.1 mouse_genomes_project 11 64860995 64885109 + MGP_CBAJ_P0029100 Lrrc48 protein_coding protein_coding MGP_CBAJ_T0029101.1 MGP_CBAJ_G0018142.1 mouse_genomes_project 11 64861023 64882942 + Lrrc48 protein_coding processed_transcript MGP_CBAJ_T0029102.1 MGP_CBAJ_G0018142.1 mouse_genomes_project 11 64861049 64902552 + MGP_CBAJ_P0029102 Lrrc48 protein_coding protein_coding MGP_CBAJ_T0029595.1 MGP_CBAJ_G0018249.1 mouse_genomes_project 11 74890111 74902910 + MGP_CBAJ_P0029595 Alox12b protein_coding protein_coding MGP_CBAJ_T0098697.1 MGP_CBAJ_G0036952.1 mouse_genomes_project 11 78139137 78139240 + Gm23226 snRNA snRNA MGP_CBAJ_T0029311.1 MGP_CBAJ_G0018181.1 mouse_genomes_project 11 67262961 67329920 + MGP_CBAJ_P0029311 Pigl protein_coding protein_coding MGP_CBAJ_T0029312.1 MGP_CBAJ_G0018181.1 mouse_genomes_project 11 67263109 67324702 + Pigl protein_coding processed_transcript MGP_CBAJ_T0003178.1 MGP_CBAJ_G0002944.1 mouse_genomes_project 11 93744477 93753323 - Bcas3os2 antisense antisense MGP_CBAJ_T0032803.1 MGP_CBAJ_G0019045.1 mouse_genomes_project 11 119540386 120000489 - MGP_CBAJ_P0032803 Prkca protein_coding protein_coding MGP_CBAJ_T0032804.1 MGP_CBAJ_G0019045.1 mouse_genomes_project 11 119545193 119589982 - MGP_CBAJ_P0032804 Prkca protein_coding protein_coding MGP_CBAJ_T0032805.1 MGP_CBAJ_G0019045.1 mouse_genomes_project 11 119585434 119638110 - Prkca protein_coding processed_transcript MGP_CBAJ_T0032806.1 MGP_CBAJ_G0019045.1 mouse_genomes_project 11 119834896 120000209 - Prkca protein_coding processed_transcript MGP_CBAJ_T0029075.1 MGP_CBAJ_G0018140.1 mouse_genomes_project 11 64686835 64697999 - MGP_CBAJ_P0029075 Srebf1 protein_coding protein_coding MGP_CBAJ_T0029076.1 MGP_CBAJ_G0018140.1 mouse_genomes_project 11 64686835 64714399 - MGP_CBAJ_P0029076 Srebf1 protein_coding protein_coding MGP_CBAJ_T0029077.1 MGP_CBAJ_G0018140.1 mouse_genomes_project 11 64687873 64688787 - Srebf1 protein_coding processed_transcript MGP_CBAJ_T0029078.1 MGP_CBAJ_G0018140.1 mouse_genomes_project 11 64688206 64701275 - MGP_CBAJ_P0029078 Srebf1 protein_coding protein_coding MGP_CBAJ_T0029079.1 MGP_CBAJ_G0018140.1 mouse_genomes_project 11 64689109 64689961 - Srebf1 protein_coding processed_transcript MGP_CBAJ_T0029080.1 MGP_CBAJ_G0018140.1 mouse_genomes_project 11 64689111 64690243 - Srebf1 protein_coding processed_transcript MGP_CBAJ_T0029081.1 MGP_CBAJ_G0018140.1 mouse_genomes_project 11 64689546 64691464 - Srebf1 protein_coding processed_transcript MGP_CBAJ_T0029082.1 MGP_CBAJ_G0018140.1 mouse_genomes_project 11 64690277 64691107 - Srebf1 protein_coding processed_transcript MGP_CBAJ_T0029083.1 MGP_CBAJ_G0018140.1 mouse_genomes_project 11 64690719 64691897 - Srebf1 protein_coding processed_transcript MGP_CBAJ_T0029084.1 MGP_CBAJ_G0018140.1 mouse_genomes_project 11 64691795 64696911 - Srebf1 protein_coding processed_transcript MGP_CBAJ_T0029085.1 MGP_CBAJ_G0018140.1 mouse_genomes_project 11 64696757 64701202 - Srebf1 protein_coding processed_transcript MGP_CBAJ_T0029086.1 MGP_CBAJ_G0018140.1 mouse_genomes_project 11 64697760 64716403 - Srebf1 protein_coding processed_transcript MGP_CBAJ_T0027952.1 MGP_CBAJ_G0017819.1 mouse_genomes_project 11 23260620 23282309 - MGP_CBAJ_P0027952 Pex13 protein_coding protein_coding MGP_CBAJ_T0027953.1 MGP_CBAJ_G0017819.1 mouse_genomes_project 11 23263597 23282202 - MGP_CBAJ_P0027953 Pex13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0027954.1 MGP_CBAJ_G0017819.1 mouse_genomes_project 11 23269971 23282192 - Pex13 protein_coding processed_transcript MGP_CBAJ_T0027955.1 MGP_CBAJ_G0017819.1 mouse_genomes_project 11 23270224 23282023 - Pex13 protein_coding processed_transcript MGP_CBAJ_T0012320.1 MGP_CBAJ_G0010432.1 mouse_genomes_project 11 3833272 3833731 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012314.1 MGP_CBAJ_G0010426.1 mouse_genomes_project 11 1491887 1492399 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0030746.1 MGP_CBAJ_G0018523.1 mouse_genomes_project 11 86717776 86735172 - MGP_CBAJ_P0030746 Gm21975 protein_coding protein_coding MGP_CBAJ_T0030747.1 MGP_CBAJ_G0018523.1 mouse_genomes_project 11 86717776 86735142 - MGP_CBAJ_P0030747 Gm21975 protein_coding nonsense_mediated_decay MGP_CBAJ_T0032554.1 MGP_CBAJ_G0018990.1 mouse_genomes_project 11 114815556 114973803 - MGP_CBAJ_P0032554 Nsf protein_coding protein_coding MGP_CBAJ_T0032555.1 MGP_CBAJ_G0018990.1 mouse_genomes_project 11 114816699 114820864 - Nsf protein_coding retained_intron MGP_CBAJ_T0032556.1 MGP_CBAJ_G0018990.1 mouse_genomes_project 11 114816708 114817864 - Nsf protein_coding retained_intron MGP_CBAJ_T0032557.1 MGP_CBAJ_G0018990.1 mouse_genomes_project 11 114842207 114871485 - Nsf protein_coding retained_intron MGP_CBAJ_T0032558.1 MGP_CBAJ_G0018990.1 mouse_genomes_project 11 114859174 114871607 - Nsf protein_coding retained_intron MGP_CBAJ_T0032559.1 MGP_CBAJ_G0018990.1 mouse_genomes_project 11 114885435 114973771 - Nsf protein_coding retained_intron MGP_CBAJ_T0032560.1 MGP_CBAJ_G0018990.1 mouse_genomes_project 11 114914470 114973771 - Nsf protein_coding retained_intron MGP_CBAJ_T0032561.1 MGP_CBAJ_G0018990.1 mouse_genomes_project 11 114915501 114955017 - MGP_CBAJ_P0032561 Nsf protein_coding protein_coding MGP_CBAJ_T0032562.1 MGP_CBAJ_G0018990.1 mouse_genomes_project 11 114915605 114934167 - Nsf protein_coding retained_intron MGP_CBAJ_T0032563.1 MGP_CBAJ_G0018990.1 mouse_genomes_project 11 114934163 114955017 - MGP_CBAJ_P0032563 Nsf protein_coding protein_coding MGP_CBAJ_T0028989.1 MGP_CBAJ_G0018115.1 mouse_genomes_project 11 63489393 63497751 - MGP_CBAJ_P0028989 Iba57 protein_coding protein_coding MGP_CBAJ_T0028990.1 MGP_CBAJ_G0018115.1 mouse_genomes_project 11 63495132 63497329 - MGP_CBAJ_P0028990 Iba57 protein_coding protein_coding MGP_CBAJ_T0028991.1 MGP_CBAJ_G0018115.1 mouse_genomes_project 11 63495364 63497712 - MGP_CBAJ_P0028991 Iba57 protein_coding protein_coding MGP_CBAJ_T0032845.1 MGP_CBAJ_G0019052.1 mouse_genomes_project 11 121203507 121209910 + MGP_CBAJ_P0032845 9930022D16Rik protein_coding protein_coding MGP_CBAJ_T0099940.1 MGP_CBAJ_G0038195.1 mouse_genomes_project 11 81420863 81420954 + Gm22771 snoRNA snoRNA MGP_CBAJ_T0101540.1 MGP_CBAJ_G0039572.1 mouse_genomes_project 11 63264510 63264921 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0028949.1 MGP_CBAJ_G0018095.1 mouse_genomes_project 11 62957154 62958120 + MGP_CBAJ_P0028949 protein_coding protein_coding MGP_CBAJ_T0033708.1 MGP_CBAJ_G0019225.1 mouse_genomes_project 11 133771068 133775521 + MGP_CBAJ_P0033708 Mrpl12 protein_coding protein_coding MGP_CBAJ_T0033709.1 MGP_CBAJ_G0019225.1 mouse_genomes_project 11 133771482 133774913 + Mrpl12 protein_coding processed_transcript MGP_CBAJ_T0028350.1 MGP_CBAJ_G0017919.1 mouse_genomes_project 11 48763943 48831743 - MGP_CBAJ_P0028350 Itk protein_coding protein_coding MGP_CBAJ_T0028351.1 MGP_CBAJ_G0017919.1 mouse_genomes_project 11 48763943 48831765 - MGP_CBAJ_P0028351 Itk protein_coding protein_coding MGP_CBAJ_T0028352.1 MGP_CBAJ_G0017919.1 mouse_genomes_project 11 48786988 48831707 - MGP_CBAJ_P0028352 Itk protein_coding protein_coding MGP_CBAJ_T0028353.1 MGP_CBAJ_G0017919.1 mouse_genomes_project 11 48805528 48831711 - Itk protein_coding retained_intron MGP_CBAJ_T0032045.1 MGP_CBAJ_G0018886.1 mouse_genomes_project 11 111146998 111147724 + MGP_CBAJ_P0032045 Hspb9 protein_coding protein_coding MGP_CBAJ_T0032046.1 MGP_CBAJ_G0018886.1 mouse_genomes_project 11 111147070 111147722 + MGP_CBAJ_P0032046 Hspb9 protein_coding protein_coding MGP_CBAJ_T0006146.1 MGP_CBAJ_G0005127.1 mouse_genomes_project 11 53225947 53281055 + Gm26542 lincRNA lincRNA MGP_CBAJ_T0031029.1 MGP_CBAJ_G0018602.1 mouse_genomes_project 11 92847301 92852071 + Car4 protein_coding retained_intron MGP_CBAJ_T0031030.1 MGP_CBAJ_G0018602.1 mouse_genomes_project 11 92847303 92855560 + MGP_CBAJ_P0031030 Car4 protein_coding protein_coding MGP_CBAJ_T0031031.1 MGP_CBAJ_G0018602.1 mouse_genomes_project 11 92847326 92851434 + Car4 protein_coding processed_transcript MGP_CBAJ_T0031032.1 MGP_CBAJ_G0018602.1 mouse_genomes_project 11 92847340 92854079 + MGP_CBAJ_P0031032 Car4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031033.1 MGP_CBAJ_G0018602.1 mouse_genomes_project 11 92847619 92853744 + MGP_CBAJ_P0031033 Car4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031034.1 MGP_CBAJ_G0018602.1 mouse_genomes_project 11 92851223 92855550 + MGP_CBAJ_P0031034 Car4 protein_coding protein_coding MGP_CBAJ_T0032701.1 MGP_CBAJ_G0019023.1 mouse_genomes_project 11 117639779 117641374 - MGP_CBAJ_P0032701 Gh protein_coding protein_coding MGP_CBAJ_T0029209.1 MGP_CBAJ_G0018167.1 mouse_genomes_project 11 66149932 66155387 - Mapk7 protein_coding processed_transcript MGP_CBAJ_T0029210.1 MGP_CBAJ_G0018167.1 mouse_genomes_project 11 66149932 66155417 - Mapk7 protein_coding processed_transcript MGP_CBAJ_T0029211.1 MGP_CBAJ_G0018167.1 mouse_genomes_project 11 66149932 66155387 - Mapk7 protein_coding processed_transcript MGP_CBAJ_T0029212.1 MGP_CBAJ_G0018167.1 mouse_genomes_project 11 66149932 66155417 - MGP_CBAJ_P0029212 Mapk7 protein_coding protein_coding MGP_CBAJ_T0029213.1 MGP_CBAJ_G0018167.1 mouse_genomes_project 11 66149932 66155387 - MGP_CBAJ_P0029213 Mapk7 protein_coding protein_coding MGP_CBAJ_T0029214.1 MGP_CBAJ_G0018167.1 mouse_genomes_project 11 66149932 66155417 - MGP_CBAJ_P0029214 Mapk7 protein_coding protein_coding MGP_CBAJ_T0029215.1 MGP_CBAJ_G0018167.1 mouse_genomes_project 11 66150579 66152059 - MGP_CBAJ_P0029215 Mapk7 protein_coding protein_coding MGP_CBAJ_T0029216.1 MGP_CBAJ_G0018167.1 mouse_genomes_project 11 66152422 66154826 - Mapk7 protein_coding processed_transcript MGP_CBAJ_T0029217.1 MGP_CBAJ_G0018167.1 mouse_genomes_project 11 66152676 66155387 - Mapk7 protein_coding processed_transcript MGP_CBAJ_T0029218.1 MGP_CBAJ_G0018167.1 mouse_genomes_project 11 66152698 66155387 - Mapk7 protein_coding processed_transcript MGP_CBAJ_T0029219.1 MGP_CBAJ_G0018167.1 mouse_genomes_project 11 66152716 66155527 - Mapk7 protein_coding processed_transcript MGP_CBAJ_T0029220.1 MGP_CBAJ_G0018167.1 mouse_genomes_project 11 66152726 66155387 - Mapk7 protein_coding processed_transcript MGP_CBAJ_T0029221.1 MGP_CBAJ_G0018167.1 mouse_genomes_project 11 66152726 66155309 - Mapk7 protein_coding processed_transcript MGP_CBAJ_T0029222.1 MGP_CBAJ_G0018167.1 mouse_genomes_project 11 66152762 66155309 - Mapk7 protein_coding processed_transcript MGP_CBAJ_T0012474.1 MGP_CBAJ_G0010586.1 mouse_genomes_project 11 64850800 64851762 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0031124.1 MGP_CBAJ_G0018623.1 mouse_genomes_project 11 95163634 95175981 - MGP_CBAJ_P0031124 Smg8 protein_coding protein_coding MGP_CBAJ_T0031125.1 MGP_CBAJ_G0018623.1 mouse_genomes_project 11 95163638 95174589 - MGP_CBAJ_P0031125 Smg8 protein_coding protein_coding MGP_CBAJ_T0017003.1 MGP_CBAJ_G0014951.1 mouse_genomes_project 11 114694746 114695329 + Gm11642 processed_transcript processed_transcript MGP_CBAJ_T0033823.1 MGP_CBAJ_G0019248.1 mouse_genomes_project 11 134101082 134103181 + Gps1 protein_coding retained_intron MGP_CBAJ_T0033824.1 MGP_CBAJ_G0019248.1 mouse_genomes_project 11 134101085 134105945 + MGP_CBAJ_P0033824 Gps1 protein_coding protein_coding MGP_CBAJ_T0033825.1 MGP_CBAJ_G0019248.1 mouse_genomes_project 11 134101085 134105631 + MGP_CBAJ_P0033825 Gps1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033826.1 MGP_CBAJ_G0019248.1 mouse_genomes_project 11 134101106 134105954 + MGP_CBAJ_P0033826 Gps1 protein_coding protein_coding MGP_CBAJ_T0033827.1 MGP_CBAJ_G0019248.1 mouse_genomes_project 11 134103619 134104609 + Gps1 protein_coding retained_intron MGP_CBAJ_T0032878.1 MGP_CBAJ_G0019059.1 mouse_genomes_project 11 121625992 121669909 - MGP_CBAJ_P0032878 1700012B07Rik protein_coding protein_coding MGP_CBAJ_T0032879.1 MGP_CBAJ_G0019059.1 mouse_genomes_project 11 121629878 121669885 - MGP_CBAJ_P0032879 1700012B07Rik protein_coding protein_coding MGP_CBAJ_T0032880.1 MGP_CBAJ_G0019059.1 mouse_genomes_project 11 121629919 121652373 - MGP_CBAJ_P0032880 1700012B07Rik protein_coding protein_coding MGP_CBAJ_T0029993.1 MGP_CBAJ_G0018336.1 mouse_genomes_project 11 76671239 76676884 - MGP_CBAJ_P0029993 Spag7 protein_coding protein_coding MGP_CBAJ_T0029994.1 MGP_CBAJ_G0018336.1 mouse_genomes_project 11 76671471 76676686 - Spag7 protein_coding retained_intron MGP_CBAJ_T0029995.1 MGP_CBAJ_G0018336.1 mouse_genomes_project 11 76671808 76676747 - Spag7 protein_coding retained_intron MGP_CBAJ_T0029996.1 MGP_CBAJ_G0018336.1 mouse_genomes_project 11 76671867 76676758 - MGP_CBAJ_P0029996 Spag7 protein_coding protein_coding MGP_CBAJ_T0033864.1 MGP_CBAJ_G0019255.1 mouse_genomes_project 11 134419393 134429479 - MGP_CBAJ_P0033864 Sectm1b protein_coding protein_coding MGP_CBAJ_T0033865.1 MGP_CBAJ_G0019255.1 mouse_genomes_project 11 134420466 134429448 - MGP_CBAJ_P0033865 Sectm1b protein_coding protein_coding MGP_CBAJ_T0033866.1 MGP_CBAJ_G0019255.1 mouse_genomes_project 11 134420471 134422299 - MGP_CBAJ_P0033866 Sectm1b protein_coding protein_coding MGP_CBAJ_T0033867.1 MGP_CBAJ_G0019255.1 mouse_genomes_project 11 134420517 134429455 - MGP_CBAJ_P0033867 Sectm1b protein_coding protein_coding MGP_CBAJ_T0033868.1 MGP_CBAJ_G0019255.1 mouse_genomes_project 11 134420892 134429365 - MGP_CBAJ_P0033868 Sectm1b protein_coding protein_coding MGP_CBAJ_T0033869.1 MGP_CBAJ_G0019255.1 mouse_genomes_project 11 134421347 134429213 - Sectm1b protein_coding retained_intron MGP_CBAJ_T0033870.1 MGP_CBAJ_G0019255.1 mouse_genomes_project 11 134422169 134422564 - Sectm1b protein_coding processed_transcript MGP_CBAJ_T0011168.1 MGP_CBAJ_G0009306.1 mouse_genomes_project 11 783195 783283 - Gm27937 misc_RNA misc_RNA MGP_CBAJ_T0099916.1 MGP_CBAJ_G0038171.1 mouse_genomes_project 11 35932753 35932880 - Gm22022 snoRNA snoRNA MGP_CBAJ_T0030787.1 MGP_CBAJ_G0018534.1 mouse_genomes_project 11 87508802 87571419 + MGP_CBAJ_P0030787 Rhot1 protein_coding protein_coding MGP_CBAJ_T0030788.1 MGP_CBAJ_G0018534.1 mouse_genomes_project 11 87508838 87572514 + MGP_CBAJ_P0030788 Rhot1 protein_coding protein_coding MGP_CBAJ_T0030789.1 MGP_CBAJ_G0018534.1 mouse_genomes_project 11 87508867 87572093 + MGP_CBAJ_P0030789 Rhot1 protein_coding protein_coding MGP_CBAJ_T0030790.1 MGP_CBAJ_G0018534.1 mouse_genomes_project 11 87508896 87556381 + Rhot1 protein_coding retained_intron MGP_CBAJ_T0030791.1 MGP_CBAJ_G0018534.1 mouse_genomes_project 11 87508902 87571374 + MGP_CBAJ_P0030791 Rhot1 protein_coding protein_coding MGP_CBAJ_T0030792.1 MGP_CBAJ_G0018534.1 mouse_genomes_project 11 87508930 87550747 + Rhot1 protein_coding retained_intron MGP_CBAJ_T0030793.1 MGP_CBAJ_G0018534.1 mouse_genomes_project 11 87509070 87570466 + MGP_CBAJ_P0030793 Rhot1 protein_coding protein_coding MGP_CBAJ_T0030794.1 MGP_CBAJ_G0018534.1 mouse_genomes_project 11 87554017 87571345 + Rhot1 protein_coding processed_transcript MGP_CBAJ_T0030795.1 MGP_CBAJ_G0018534.1 mouse_genomes_project 11 87556834 87559170 + Rhot1 protein_coding retained_intron MGP_CBAJ_T0099964.1 MGP_CBAJ_G0038219.1 mouse_genomes_project 11 128343734 128343869 + Gm23699 snoRNA snoRNA MGP_CBAJ_T0028405.1 MGP_CBAJ_G0017935.1 mouse_genomes_project 11 51659733 51700320 - MGP_CBAJ_P0028405 protein_coding protein_coding MGP_CBAJ_T0016999.1 MGP_CBAJ_G0014948.1 mouse_genomes_project 11 110788529 110789274 + Gm12348 processed_transcript processed_transcript MGP_CBAJ_T0033914.1 MGP_CBAJ_G0019269.1 mouse_genomes_project 11 134830327 135033483 + MGP_CBAJ_P0033914 Tbcd protein_coding unknown_likely_coding MGP_CBAJ_T0033915.1 MGP_CBAJ_G0019269.1 mouse_genomes_project 11 134849403 135033702 + MGP_CBAJ_P0033915 Tbcd protein_coding protein_coding MGP_CBAJ_T0033916.1 MGP_CBAJ_G0019269.1 mouse_genomes_project 11 134899356 134907986 + MGP_CBAJ_P0033916 Tbcd protein_coding protein_coding MGP_CBAJ_T0033917.1 MGP_CBAJ_G0019269.1 mouse_genomes_project 11 134910970 134989053 + MGP_CBAJ_P0033917 Tbcd protein_coding nonsense_mediated_decay MGP_CBAJ_T0033919.1 MGP_CBAJ_G0019269.1 mouse_genomes_project 11 134956637 135008618 + Tbcd protein_coding processed_transcript MGP_CBAJ_T0033920.1 MGP_CBAJ_G0019269.1 mouse_genomes_project 11 134962547 135008595 + Tbcd protein_coding retained_intron MGP_CBAJ_T0033921.1 MGP_CBAJ_G0019269.1 mouse_genomes_project 11 135016527 135033701 + Tbcd protein_coding retained_intron MGP_CBAJ_T0033922.1 MGP_CBAJ_G0019269.1 mouse_genomes_project 11 135019830 135033701 + Tbcd protein_coding processed_transcript MGP_CBAJ_T0033923.1 MGP_CBAJ_G0019269.1 mouse_genomes_project 11 135019916 135033701 + Tbcd protein_coding processed_transcript MGP_CBAJ_T0033879.1 MGP_CBAJ_G0019259.1 mouse_genomes_project 11 134544854 134546557 + MGP_CBAJ_P0033879 Uts2r protein_coding protein_coding MGP_CBAJ_T0099915.1 MGP_CBAJ_G0038170.1 mouse_genomes_project 11 30168136 30168276 + Gm22588 snoRNA snoRNA MGP_CBAJ_T0016973.1 MGP_CBAJ_G0014932.1 mouse_genomes_project 11 93769260 93812022 - 2610027K06Rik processed_transcript processed_transcript MGP_CBAJ_T0016974.1 MGP_CBAJ_G0014932.1 mouse_genomes_project 11 93773391 93812036 - 2610027K06Rik processed_transcript processed_transcript MGP_CBAJ_T0016975.1 MGP_CBAJ_G0014932.1 mouse_genomes_project 11 93773477 93781774 - 2610027K06Rik processed_transcript processed_transcript MGP_CBAJ_T0030407.1 MGP_CBAJ_G0018447.1 mouse_genomes_project 11 82487428 82598104 - MGP_CBAJ_P0030407 Rph3al protein_coding protein_coding MGP_CBAJ_T0030408.1 MGP_CBAJ_G0018447.1 mouse_genomes_project 11 82488566 82568935 - MGP_CBAJ_P0030408 Rph3al protein_coding protein_coding MGP_CBAJ_T0030409.1 MGP_CBAJ_G0018447.1 mouse_genomes_project 11 82557594 82586092 - MGP_CBAJ_P0030409 Rph3al protein_coding protein_coding MGP_CBAJ_T0030410.1 MGP_CBAJ_G0018447.1 mouse_genomes_project 11 82558610 82598063 - MGP_CBAJ_P0030410 Rph3al protein_coding protein_coding MGP_CBAJ_T0030411.1 MGP_CBAJ_G0018447.1 mouse_genomes_project 11 82564443 82598795 - MGP_CBAJ_P0030411 Rph3al protein_coding protein_coding MGP_CBAJ_T0031713.1 MGP_CBAJ_G0018769.1 mouse_genomes_project 11 107692399 107694667 + MGP_CBAJ_P0031713 B230217C12Rik protein_coding protein_coding MGP_CBAJ_T0031714.1 MGP_CBAJ_G0018769.1 mouse_genomes_project 11 107692912 107695728 + B230217C12Rik protein_coding lincRNA MGP_CBAJ_T0031715.1 MGP_CBAJ_G0018769.1 mouse_genomes_project 11 107692934 107695446 + B230217C12Rik protein_coding processed_transcript MGP_CBAJ_T0031716.1 MGP_CBAJ_G0018769.1 mouse_genomes_project 11 107692938 107694667 + B230217C12Rik protein_coding processed_transcript MGP_CBAJ_T0003266.1 MGP_CBAJ_G0003014.1 mouse_genomes_project 11 121791370 121793190 + Gm11697 antisense antisense MGP_CBAJ_T0031225.1 MGP_CBAJ_G0018647.1 mouse_genomes_project 11 96441889 96447057 + Cuedc1 protein_coding processed_transcript MGP_CBAJ_T0031226.1 MGP_CBAJ_G0018647.1 mouse_genomes_project 11 96442975 96554508 + MGP_CBAJ_P0031226 Cuedc1 protein_coding protein_coding MGP_CBAJ_T0031227.1 MGP_CBAJ_G0018647.1 mouse_genomes_project 11 96446238 96546086 + Cuedc1 protein_coding retained_intron MGP_CBAJ_T0031228.1 MGP_CBAJ_G0018647.1 mouse_genomes_project 11 96525875 96554508 + MGP_CBAJ_P0031228 Cuedc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0031229.1 MGP_CBAJ_G0018647.1 mouse_genomes_project 11 96543030 96544008 + Cuedc1 protein_coding retained_intron MGP_CBAJ_T0031230.1 MGP_CBAJ_G0018647.1 mouse_genomes_project 11 96546579 96549403 + Cuedc1 protein_coding processed_transcript MGP_CBAJ_T0031231.1 MGP_CBAJ_G0018647.1 mouse_genomes_project 11 96548407 96553344 + Cuedc1 protein_coding retained_intron MGP_CBAJ_T0032251.1 MGP_CBAJ_G0018931.1 mouse_genomes_project 11 112352455 112355233 + Dhx8 protein_coding retained_intron MGP_CBAJ_T0032252.1 MGP_CBAJ_G0018931.1 mouse_genomes_project 11 112352486 112393580 + MGP_CBAJ_P0032252 Dhx8 protein_coding protein_coding MGP_CBAJ_T0032253.1 MGP_CBAJ_G0018931.1 mouse_genomes_project 11 112352565 112353976 + Dhx8 protein_coding retained_intron MGP_CBAJ_T0032254.1 MGP_CBAJ_G0018931.1 mouse_genomes_project 11 112352577 112393029 + MGP_CBAJ_P0032254 Dhx8 protein_coding protein_coding MGP_CBAJ_T0032255.1 MGP_CBAJ_G0018931.1 mouse_genomes_project 11 112373615 112375013 + Dhx8 protein_coding retained_intron MGP_CBAJ_T0031541.1 MGP_CBAJ_G0018730.1 mouse_genomes_project 11 105848314 105857646 + MGP_CBAJ_P0031541 Hoxb6 protein_coding protein_coding MGP_CBAJ_T0031542.1 MGP_CBAJ_G0018730.1 mouse_genomes_project 11 105855254 105857645 + MGP_CBAJ_P0031542 Hoxb6 protein_coding protein_coding MGP_CBAJ_T0029286.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67085287 67261834 - MGP_CBAJ_P0029286 Ncor1 protein_coding protein_coding MGP_CBAJ_T0029287.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67085287 67233476 - MGP_CBAJ_P0029287 Ncor1 protein_coding protein_coding MGP_CBAJ_T0029288.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67085550 67152805 - MGP_CBAJ_P0029288 Ncor1 protein_coding protein_coding MGP_CBAJ_T0029289.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67086461 67089890 - MGP_CBAJ_P0029289 Ncor1 protein_coding protein_coding MGP_CBAJ_T0029290.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67086657 67133074 - MGP_CBAJ_P0029290 Ncor1 protein_coding protein_coding MGP_CBAJ_T0029291.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67086657 67233442 - MGP_CBAJ_P0029291 Ncor1 protein_coding protein_coding MGP_CBAJ_T0029292.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67086657 67132298 - MGP_CBAJ_P0029292 Ncor1 protein_coding protein_coding MGP_CBAJ_T0029293.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67093929 67098672 - Ncor1 protein_coding retained_intron MGP_CBAJ_T0029294.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67094179 67098796 - Ncor1 protein_coding retained_intron MGP_CBAJ_T0029295.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67095798 67099571 - Ncor1 protein_coding retained_intron MGP_CBAJ_T0029296.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67109082 67115070 - Ncor1 protein_coding retained_intron MGP_CBAJ_T0029297.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67113733 67124673 - Ncor1 protein_coding processed_transcript MGP_CBAJ_T0029298.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67114953 67170523 - MGP_CBAJ_P0029298 Ncor1 protein_coding protein_coding MGP_CBAJ_T0029299.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67127188 67143681 - Ncor1 protein_coding processed_transcript MGP_CBAJ_T0029300.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67140058 67233476 - Ncor1 protein_coding retained_intron MGP_CBAJ_T0029301.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67147579 67157493 - MGP_CBAJ_P0029301 Ncor1 protein_coding protein_coding MGP_CBAJ_T0029302.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67147624 67159128 - MGP_CBAJ_P0029302 Ncor1 protein_coding protein_coding MGP_CBAJ_T0029303.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67147644 67157642 - MGP_CBAJ_P0029303 Ncor1 protein_coding protein_coding MGP_CBAJ_T0029304.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67147646 67262308 - MGP_CBAJ_P0029304 Ncor1 protein_coding protein_coding MGP_CBAJ_T0029305.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67150903 67157551 - Ncor1 protein_coding retained_intron MGP_CBAJ_T0029306.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67159041 67233476 - MGP_CBAJ_P0029306 Ncor1 protein_coding protein_coding MGP_CBAJ_T0029307.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67169912 67173056 - Ncor1 protein_coding retained_intron MGP_CBAJ_T0029308.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67173049 67181072 - Ncor1 protein_coding retained_intron MGP_CBAJ_T0029309.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67180904 67261825 - MGP_CBAJ_P0029309 Ncor1 protein_coding protein_coding MGP_CBAJ_T0029310.1 MGP_CBAJ_G0018180.1 mouse_genomes_project 11 67204682 67263043 - MGP_CBAJ_P0029310 Ncor1 protein_coding protein_coding MGP_CBAJ_T0029006.1 MGP_CBAJ_G0018120.1 mouse_genomes_project 11 63558386 63574810 - MGP_CBAJ_P0029006 Arf1 protein_coding protein_coding MGP_CBAJ_T0012385.1 MGP_CBAJ_G0010497.1 mouse_genomes_project 11 27025929 27026148 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0033427.1 MGP_CBAJ_G0019169.1 mouse_genomes_project 11 130725023 130739647 - MGP_CBAJ_P0033427 Tmc6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033428.1 MGP_CBAJ_G0019169.1 mouse_genomes_project 11 130725023 130740638 - MGP_CBAJ_P0033428 Tmc6 protein_coding protein_coding MGP_CBAJ_T0033429.1 MGP_CBAJ_G0019169.1 mouse_genomes_project 11 130725095 130728109 - Tmc6 protein_coding retained_intron MGP_CBAJ_T0033430.1 MGP_CBAJ_G0019169.1 mouse_genomes_project 11 130729109 130733072 - MGP_CBAJ_P0033430 Tmc6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033431.1 MGP_CBAJ_G0019169.1 mouse_genomes_project 11 130735377 130740620 - MGP_CBAJ_P0033431 Tmc6 protein_coding protein_coding MGP_CBAJ_T0033432.1 MGP_CBAJ_G0019169.1 mouse_genomes_project 11 130735737 130739649 - MGP_CBAJ_P0033432 Tmc6 protein_coding protein_coding MGP_CBAJ_T0033433.1 MGP_CBAJ_G0019169.1 mouse_genomes_project 11 130738740 130740943 - MGP_CBAJ_P0033433 Tmc6 protein_coding protein_coding MGP_CBAJ_T0033434.1 MGP_CBAJ_G0019169.1 mouse_genomes_project 11 130738936 130742197 - MGP_CBAJ_P0033434 Tmc6 protein_coding protein_coding MGP_CBAJ_T0033435.1 MGP_CBAJ_G0019169.1 mouse_genomes_project 11 130739190 130740657 - MGP_CBAJ_P0033435 Tmc6 protein_coding protein_coding MGP_CBAJ_T0006140.1 MGP_CBAJ_G0005122.1 mouse_genomes_project 11 47469169 47530736 + Gm12160 lincRNA lincRNA MGP_CBAJ_T0033723.1 MGP_CBAJ_G0019230.1 mouse_genomes_project 11 133856892 133869695 - MGP_CBAJ_P0033723 P4hb protein_coding protein_coding MGP_CBAJ_T0033724.1 MGP_CBAJ_G0019230.1 mouse_genomes_project 11 133856899 133857831 - P4hb protein_coding processed_transcript MGP_CBAJ_T0033725.1 MGP_CBAJ_G0019230.1 mouse_genomes_project 11 133857539 133869283 - MGP_CBAJ_P0033725 P4hb protein_coding protein_coding MGP_CBAJ_T0032435.1 MGP_CBAJ_G0018962.1 mouse_genomes_project 11 113474550 113490801 - MGP_CBAJ_P0032435 Ccdc43 protein_coding protein_coding MGP_CBAJ_T0032436.1 MGP_CBAJ_G0018962.1 mouse_genomes_project 11 113474552 113490753 - MGP_CBAJ_P0032436 Ccdc43 protein_coding protein_coding MGP_CBAJ_T0032437.1 MGP_CBAJ_G0018962.1 mouse_genomes_project 11 113476214 113490555 - Ccdc43 protein_coding processed_transcript MGP_CBAJ_T0032438.1 MGP_CBAJ_G0018962.1 mouse_genomes_project 11 113478198 113490753 - Ccdc43 protein_coding processed_transcript MGP_CBAJ_T0032439.1 MGP_CBAJ_G0018962.1 mouse_genomes_project 11 113479598 113490689 - Ccdc43 protein_coding processed_transcript MGP_CBAJ_T0009580.1 MGP_CBAJ_G0007718.1 mouse_genomes_project 11 75851041 75851164 + Gm44349 miRNA miRNA MGP_CBAJ_T0003245.1 MGP_CBAJ_G0002997.1 mouse_genomes_project 11 117382686 117383929 - Taco1os antisense antisense MGP_CBAJ_T0030867.1 MGP_CBAJ_G0018556.1 mouse_genomes_project 11 90343993 90423064 - MGP_CBAJ_P0030867 Rffl protein_coding protein_coding MGP_CBAJ_T0030868.1 MGP_CBAJ_G0018556.1 mouse_genomes_project 11 90346179 90388383 - MGP_CBAJ_P0030868 Rffl protein_coding protein_coding MGP_CBAJ_T0030869.1 MGP_CBAJ_G0018556.1 mouse_genomes_project 11 90347593 90368643 - MGP_CBAJ_P0030869 Rffl protein_coding protein_coding MGP_CBAJ_T0030870.1 MGP_CBAJ_G0018556.1 mouse_genomes_project 11 90352834 90388627 - MGP_CBAJ_P0030870 Rffl protein_coding protein_coding MGP_CBAJ_T0098670.1 MGP_CBAJ_G0036925.1 mouse_genomes_project 11 15528556 15528663 - Gm25698 snRNA snRNA MGP_CBAJ_T0003160.1 MGP_CBAJ_G0002930.1 mouse_genomes_project 11 85464142 85475315 + Slc13a2os antisense antisense MGP_CBAJ_T0012552.1 MGP_CBAJ_G0010664.1 mouse_genomes_project 11 96221184 96221596 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009609.1 MGP_CBAJ_G0007747.1 mouse_genomes_project 11 95970078 95970193 - Mir142b miRNA miRNA MGP_CBAJ_T0032399.1 MGP_CBAJ_G0018955.1 mouse_genomes_project 11 113179623 113189046 + MGP_CBAJ_P0032399 Grn protein_coding protein_coding MGP_CBAJ_T0032400.1 MGP_CBAJ_G0018955.1 mouse_genomes_project 11 113179826 113186683 + MGP_CBAJ_P0032400 Grn protein_coding protein_coding MGP_CBAJ_T0032401.1 MGP_CBAJ_G0018955.1 mouse_genomes_project 11 113185021 113186494 + Grn protein_coding retained_intron MGP_CBAJ_T0032402.1 MGP_CBAJ_G0018955.1 mouse_genomes_project 11 113186168 113186830 + Grn protein_coding retained_intron MGP_CBAJ_T0032403.1 MGP_CBAJ_G0018955.1 mouse_genomes_project 11 113186335 113187499 + Grn protein_coding retained_intron MGP_CBAJ_T0032404.1 MGP_CBAJ_G0018955.1 mouse_genomes_project 11 113186338 113187128 + Grn protein_coding retained_intron MGP_CBAJ_T0032405.1 MGP_CBAJ_G0018955.1 mouse_genomes_project 11 113186954 113188181 + Grn protein_coding retained_intron MGP_CBAJ_T0032406.1 MGP_CBAJ_G0018955.1 mouse_genomes_project 11 113187521 113188810 + MGP_CBAJ_P0032406 Grn protein_coding protein_coding MGP_CBAJ_T0032407.1 MGP_CBAJ_G0018955.1 mouse_genomes_project 11 113187542 113188301 + Grn protein_coding retained_intron MGP_CBAJ_T0032408.1 MGP_CBAJ_G0018955.1 mouse_genomes_project 11 113187652 113189285 + MGP_CBAJ_P0032408 Grn protein_coding protein_coding MGP_CBAJ_T0012453.1 MGP_CBAJ_G0010565.1 mouse_genomes_project 11 57567811 57571885 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0029771.1 MGP_CBAJ_G0018293.1 mouse_genomes_project 11 75761916 75764244 + Neurl4 protein_coding processed_transcript MGP_CBAJ_T0029772.1 MGP_CBAJ_G0018293.1 mouse_genomes_project 11 75762660 75775693 + MGP_CBAJ_P0029772 Neurl4 protein_coding protein_coding MGP_CBAJ_T0029773.1 MGP_CBAJ_G0018293.1 mouse_genomes_project 11 75762660 75775693 + MGP_CBAJ_P0029773 Neurl4 protein_coding protein_coding MGP_CBAJ_T0029774.1 MGP_CBAJ_G0018293.1 mouse_genomes_project 11 75762660 75775693 + MGP_CBAJ_P0029774 Neurl4 protein_coding protein_coding MGP_CBAJ_T0029775.1 MGP_CBAJ_G0018293.1 mouse_genomes_project 11 75762735 75775998 + MGP_CBAJ_P0029775 Neurl4 protein_coding protein_coding MGP_CBAJ_T0029776.1 MGP_CBAJ_G0018293.1 mouse_genomes_project 11 75762871 75767775 + Neurl4 protein_coding retained_intron MGP_CBAJ_T0029777.1 MGP_CBAJ_G0018293.1 mouse_genomes_project 11 75763000 75764759 + Neurl4 protein_coding processed_transcript MGP_CBAJ_T0029778.1 MGP_CBAJ_G0018293.1 mouse_genomes_project 11 75764236 75775509 + MGP_CBAJ_P0029778 Neurl4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029779.1 MGP_CBAJ_G0018293.1 mouse_genomes_project 11 75764879 75770913 + MGP_CBAJ_P0029779 Neurl4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0029780.1 MGP_CBAJ_G0018293.1 mouse_genomes_project 11 75769441 75770699 + Neurl4 protein_coding retained_intron MGP_CBAJ_T0029781.1 MGP_CBAJ_G0018293.1 mouse_genomes_project 11 75770812 75772502 + Neurl4 protein_coding retained_intron MGP_CBAJ_T0029782.1 MGP_CBAJ_G0018293.1 mouse_genomes_project 11 75771153 75773043 + Neurl4 protein_coding retained_intron MGP_CBAJ_T0029783.1 MGP_CBAJ_G0018293.1 mouse_genomes_project 11 75773213 75775330 + MGP_CBAJ_P0029783 Neurl4 protein_coding protein_coding MGP_CBAJ_T0031599.1 MGP_CBAJ_G0018742.1 mouse_genomes_project 11 106569844 106571225 + Prr15l protein_coding processed_transcript MGP_CBAJ_T0031600.1 MGP_CBAJ_G0018742.1 mouse_genomes_project 11 106571034 106578907 + MGP_CBAJ_P0031600 Prr15l protein_coding protein_coding MGP_CBAJ_T0031601.1 MGP_CBAJ_G0018742.1 mouse_genomes_project 11 106571056 106581085 + MGP_CBAJ_P0031601 Prr15l protein_coding protein_coding MGP_CBAJ_T0031602.1 MGP_CBAJ_G0018742.1 mouse_genomes_project 11 106571126 106578902 + MGP_CBAJ_P0031602 Prr15l protein_coding protein_coding MGP_CBAJ_T0031603.1 MGP_CBAJ_G0018742.1 mouse_genomes_project 11 106574691 106578539 + MGP_CBAJ_P0031603 Prr15l protein_coding protein_coding MGP_CBAJ_T0012574.1 MGP_CBAJ_G0010686.1 mouse_genomes_project 11 110116763 110117051 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0029375.1 MGP_CBAJ_G0018199.1 mouse_genomes_project 11 69474688 69574772 + MGP_CBAJ_P0029375 Hs3st3a1 protein_coding protein_coding MGP_CBAJ_T0030011.1 MGP_CBAJ_G0018339.1 mouse_genomes_project 11 76711498 76746044 + MGP_CBAJ_P0030011 Kif1c protein_coding protein_coding MGP_CBAJ_T0030012.1 MGP_CBAJ_G0018339.1 mouse_genomes_project 11 76711498 76718521 + MGP_CBAJ_P0030012 Kif1c protein_coding protein_coding MGP_CBAJ_T0030013.1 MGP_CBAJ_G0018339.1 mouse_genomes_project 11 76711511 76744465 + MGP_CBAJ_P0030013 Kif1c protein_coding protein_coding MGP_CBAJ_T0030014.1 MGP_CBAJ_G0018339.1 mouse_genomes_project 11 76711526 76744502 + MGP_CBAJ_P0030014 Kif1c protein_coding protein_coding MGP_CBAJ_T0030015.1 MGP_CBAJ_G0018339.1 mouse_genomes_project 11 76711600 76746044 + MGP_CBAJ_P0030015 Kif1c protein_coding protein_coding MGP_CBAJ_T0031512.1 MGP_CBAJ_G0018719.1 mouse_genomes_project 11 105434088 105491731 - MGP_CBAJ_P0031512 Igf2bp1 protein_coding protein_coding MGP_CBAJ_T0031513.1 MGP_CBAJ_G0018719.1 mouse_genomes_project 11 105444346 105448786 - Igf2bp1 protein_coding processed_transcript MGP_CBAJ_T0031514.1 MGP_CBAJ_G0018719.1 mouse_genomes_project 11 105456243 105465720 - Igf2bp1 protein_coding processed_transcript MGP_CBAJ_T0031515.1 MGP_CBAJ_G0018719.1 mouse_genomes_project 11 105457078 105465737 - Igf2bp1 protein_coding processed_transcript MGP_CBAJ_T0031516.1 MGP_CBAJ_G0018719.1 mouse_genomes_project 11 105461525 105465734 - Igf2bp1 protein_coding processed_transcript MGP_CBAJ_T0006093.1 MGP_CBAJ_G0005081.1 mouse_genomes_project 11 19254430 19255208 - Gm12031 lincRNA lincRNA MGP_CBAJ_T0029937.1 MGP_CBAJ_G0018327.1 mouse_genomes_project 11 76515552 76516673 + MGP_CBAJ_P0029937 Pld2 protein_coding protein_coding MGP_CBAJ_T0029938.1 MGP_CBAJ_G0018327.1 mouse_genomes_project 11 76515794 76536113 + MGP_CBAJ_P0029938 Pld2 protein_coding protein_coding MGP_CBAJ_T0029939.1 MGP_CBAJ_G0018327.1 mouse_genomes_project 11 76515831 76536113 + MGP_CBAJ_P0029939 Pld2 protein_coding protein_coding MGP_CBAJ_T0029940.1 MGP_CBAJ_G0018327.1 mouse_genomes_project 11 76515844 76521882 + MGP_CBAJ_P0029940 Pld2 protein_coding protein_coding MGP_CBAJ_T0029941.1 MGP_CBAJ_G0018327.1 mouse_genomes_project 11 76530156 76535106 + Pld2 protein_coding retained_intron MGP_CBAJ_T0029942.1 MGP_CBAJ_G0018327.1 mouse_genomes_project 11 76533644 76535230 + MGP_CBAJ_P0029942 Pld2 protein_coding protein_coding MGP_CBAJ_T0029943.1 MGP_CBAJ_G0018327.1 mouse_genomes_project 11 76533809 76535480 + Pld2 protein_coding retained_intron MGP_CBAJ_T0003200.1 MGP_CBAJ_G0002960.1 mouse_genomes_project 11 105491679 105497709 + antisense antisense MGP_CBAJ_T0009552.1 MGP_CBAJ_G0007690.1 mouse_genomes_project 11 48513927 48514048 + Mir8100 miRNA miRNA MGP_CBAJ_T0003051.1 MGP_CBAJ_G0002839.1 mouse_genomes_project 11 10635097 10660045 + Gm12002 antisense antisense MGP_CBAJ_T0003052.1 MGP_CBAJ_G0002839.1 mouse_genomes_project 11 10635116 10658745 + Gm12002 antisense antisense MGP_CBAJ_T0003053.1 MGP_CBAJ_G0002839.1 mouse_genomes_project 11 10642858 10674307 + Gm12002 antisense antisense MGP_CBAJ_T0029197.1 MGP_CBAJ_G0018165.1 mouse_genomes_project 11 66100093 66105759 - MGP_CBAJ_P0029197 Rnf112 protein_coding unknown_likely_coding MGP_CBAJ_T0029198.1 MGP_CBAJ_G0018165.1 mouse_genomes_project 11 66100094 66105658 - MGP_CBAJ_P0029198 Rnf112 protein_coding protein_coding MGP_CBAJ_T0029199.1 MGP_CBAJ_G0018165.1 mouse_genomes_project 11 66100094 66105759 - MGP_CBAJ_P0029199 Rnf112 protein_coding protein_coding MGP_CBAJ_T0029200.1 MGP_CBAJ_G0018165.1 mouse_genomes_project 11 66103697 66105784 - Rnf112 protein_coding processed_transcript MGP_CBAJ_T0029201.1 MGP_CBAJ_G0018165.1 mouse_genomes_project 11 66103915 66105572 - Rnf112 protein_coding processed_transcript MGP_CBAJ_T0029202.1 MGP_CBAJ_G0018165.1 mouse_genomes_project 11 66104387 66105595 - Rnf112 protein_coding processed_transcript MGP_CBAJ_T0029203.1 MGP_CBAJ_G0018165.1 mouse_genomes_project 11 66104568 66105586 - Rnf112 protein_coding processed_transcript MGP_CBAJ_T0003214.1 MGP_CBAJ_G0002972.1 mouse_genomes_project 11 108858489 108870880 - Gm12359 antisense antisense MGP_CBAJ_T0003215.1 MGP_CBAJ_G0002972.1 mouse_genomes_project 11 108859091 108870880 - Gm12359 antisense antisense MGP_CBAJ_T0003216.1 MGP_CBAJ_G0002972.1 mouse_genomes_project 11 108865439 108870851 - Gm12359 antisense antisense MGP_CBAJ_T0028471.1 MGP_CBAJ_G0017961.1 mouse_genomes_project 11 52592781 52594290 + MGP_CBAJ_P0028471 Scgb3a1 protein_coding protein_coding MGP_CBAJ_T0028472.1 MGP_CBAJ_G0017961.1 mouse_genomes_project 11 52592781 52594290 + MGP_CBAJ_P0028472 Scgb3a1 protein_coding protein_coding MGP_CBAJ_T0003054.1 MGP_CBAJ_G0002840.1 mouse_genomes_project 11 15615150 15630423 - Egfros antisense antisense MGP_CBAJ_T0030780.1 MGP_CBAJ_G0018531.1 mouse_genomes_project 11 87420775 87426262 - MGP_CBAJ_P0030780 Tefm protein_coding protein_coding MGP_CBAJ_T0030781.1 MGP_CBAJ_G0018531.1 mouse_genomes_project 11 87420775 87423996 - MGP_CBAJ_P0030781 Tefm protein_coding protein_coding MGP_CBAJ_T0030782.1 MGP_CBAJ_G0018531.1 mouse_genomes_project 11 87422043 87426230 - MGP_CBAJ_P0030782 Tefm protein_coding protein_coding MGP_CBAJ_T0032610.1 MGP_CBAJ_G0019001.1 mouse_genomes_project 11 116326552 116340510 + MGP_CBAJ_P0032610 Mettl2 protein_coding protein_coding MGP_CBAJ_T0032611.1 MGP_CBAJ_G0019001.1 mouse_genomes_project 11 116326606 116340510 + Mettl2 protein_coding processed_transcript MGP_CBAJ_T0032612.1 MGP_CBAJ_G0019001.1 mouse_genomes_project 11 116332572 116339101 + Mettl2 protein_coding processed_transcript MGP_CBAJ_T0032613.1 MGP_CBAJ_G0019001.1 mouse_genomes_project 11 116332583 116335780 + Mettl2 protein_coding processed_transcript MGP_CBAJ_T0032614.1 MGP_CBAJ_G0019001.1 mouse_genomes_project 11 116337686 116340510 + Mettl2 protein_coding processed_transcript MGP_CBAJ_T0031127.1 MGP_CBAJ_G0018625.1 mouse_genomes_project 11 95203398 95218963 + MGP_CBAJ_P0031127 Ska2 protein_coding protein_coding MGP_CBAJ_T0031128.1 MGP_CBAJ_G0018625.1 mouse_genomes_project 11 95203415 95218962 + Ska2 protein_coding processed_transcript MGP_CBAJ_T0031129.1 MGP_CBAJ_G0018625.1 mouse_genomes_project 11 95210033 95216327 + Ska2 protein_coding processed_transcript MGP_CBAJ_T0030493.1 MGP_CBAJ_G0018467.1 mouse_genomes_project 11 83915588 84034264 - MGP_CBAJ_P0030493 Efcab5 protein_coding protein_coding MGP_CBAJ_T0030494.1 MGP_CBAJ_G0018467.1 mouse_genomes_project 11 83915617 83928689 - Efcab5 protein_coding retained_intron MGP_CBAJ_T0030495.1 MGP_CBAJ_G0018467.1 mouse_genomes_project 11 83915858 83997663 - MGP_CBAJ_P0030495 Efcab5 protein_coding protein_coding MGP_CBAJ_T0030496.1 MGP_CBAJ_G0018467.1 mouse_genomes_project 11 83915971 84068231 - MGP_CBAJ_P0030496 Efcab5 protein_coding unknown_likely_coding MGP_CBAJ_T0030497.1 MGP_CBAJ_G0018467.1 mouse_genomes_project 11 83928346 83975474 - Efcab5 protein_coding retained_intron MGP_CBAJ_T0030498.1 MGP_CBAJ_G0018467.1 mouse_genomes_project 11 83995607 84014265 - Efcab5 protein_coding processed_transcript MGP_CBAJ_T0009582.1 MGP_CBAJ_G0007720.1 mouse_genomes_project 11 76163692 76163817 - Mir497b miRNA miRNA MGP_CBAJ_T0032239.1 MGP_CBAJ_G0018928.1 mouse_genomes_project 11 112168154 112179607 + MGP_CBAJ_P0032239 Tmem106a protein_coding protein_coding MGP_CBAJ_T0032240.1 MGP_CBAJ_G0018928.1 mouse_genomes_project 11 112168154 112179607 + MGP_CBAJ_P0032240 Tmem106a protein_coding protein_coding MGP_CBAJ_T0032241.1 MGP_CBAJ_G0018928.1 mouse_genomes_project 11 112168156 112177253 + Tmem106a protein_coding processed_transcript MGP_CBAJ_T0032242.1 MGP_CBAJ_G0018928.1 mouse_genomes_project 11 112168169 112176759 + MGP_CBAJ_P0032242 Tmem106a protein_coding protein_coding MGP_CBAJ_T0032243.1 MGP_CBAJ_G0018928.1 mouse_genomes_project 11 112168212 112176714 + MGP_CBAJ_P0032243 Tmem106a protein_coding protein_coding MGP_CBAJ_T0032244.1 MGP_CBAJ_G0018928.1 mouse_genomes_project 11 112171713 112178585 + Tmem106a protein_coding processed_transcript MGP_CBAJ_T0031629.1 MGP_CBAJ_G0018752.1 mouse_genomes_project 11 106861250 106893036 - MGP_CBAJ_P0031629 Kpnb1 protein_coding protein_coding MGP_CBAJ_T0031630.1 MGP_CBAJ_G0018752.1 mouse_genomes_project 11 106864970 106866683 - Kpnb1 protein_coding retained_intron MGP_CBAJ_T0031631.1 MGP_CBAJ_G0018752.1 mouse_genomes_project 11 106866681 106867861 - Kpnb1 protein_coding retained_intron MGP_CBAJ_T0031511.1 MGP_CBAJ_G0018718.1 mouse_genomes_project 11 105322436 105383936 - MGP_CBAJ_P0031511 B4galnt2 protein_coding protein_coding MGP_CBAJ_T0006107.1 MGP_CBAJ_G0005095.1 mouse_genomes_project 11 24422583 24432303 - Gm10466 lincRNA lincRNA MGP_CBAJ_T0009641.1 MGP_CBAJ_G0007779.1 mouse_genomes_project 11 119213843 119213901 + Mir6932 miRNA miRNA MGP_CBAJ_T0027419.1 MGP_CBAJ_G0017696.1 mouse_genomes_project 11 1106471 1131178 - MGP_CBAJ_P0027419 Tcn2 protein_coding protein_coding MGP_CBAJ_T0027420.1 MGP_CBAJ_G0017696.1 mouse_genomes_project 11 1106471 1131265 - MGP_CBAJ_P0027420 Tcn2 protein_coding protein_coding MGP_CBAJ_T0027421.1 MGP_CBAJ_G0017696.1 mouse_genomes_project 11 1106471 1131464 - MGP_CBAJ_P0027421 Tcn2 protein_coding protein_coding MGP_CBAJ_T0027422.1 MGP_CBAJ_G0017696.1 mouse_genomes_project 11 1106471 1131383 - MGP_CBAJ_P0027422 Tcn2 protein_coding protein_coding MGP_CBAJ_T0027423.1 MGP_CBAJ_G0017696.1 mouse_genomes_project 11 1106471 1131349 - MGP_CBAJ_P0027423 Tcn2 protein_coding protein_coding MGP_CBAJ_T0027424.1 MGP_CBAJ_G0017696.1 mouse_genomes_project 11 1106471 1131300 - MGP_CBAJ_P0027424 Tcn2 protein_coding protein_coding MGP_CBAJ_T0027425.1 MGP_CBAJ_G0017696.1 mouse_genomes_project 11 1106471 1131193 - MGP_CBAJ_P0027425 Tcn2 protein_coding protein_coding MGP_CBAJ_T0006138.1 MGP_CBAJ_G0005120.1 mouse_genomes_project 11 46831510 46836312 + 4930597A21Rik lincRNA lincRNA MGP_CBAJ_T0032202.1 MGP_CBAJ_G0018921.1 mouse_genomes_project 11 111994153 112004722 + MGP_CBAJ_P0032202 Rundc1 protein_coding protein_coding MGP_CBAJ_T0012563.1 MGP_CBAJ_G0010675.1 mouse_genomes_project 11 104848532 104848708 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012337.1 MGP_CBAJ_G0010449.1 mouse_genomes_project 11 11355653 11356371 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012565.1 MGP_CBAJ_G0010677.1 mouse_genomes_project 11 106408576 106408963 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031024.1 MGP_CBAJ_G0018601.1 mouse_genomes_project 11 92770273 92781365 - MGP_CBAJ_P0031024 Znhit3 protein_coding protein_coding MGP_CBAJ_T0031025.1 MGP_CBAJ_G0018601.1 mouse_genomes_project 11 92774009 92781348 - Znhit3 protein_coding processed_transcript MGP_CBAJ_T0031026.1 MGP_CBAJ_G0018601.1 mouse_genomes_project 11 92774187 92781365 - Znhit3 protein_coding processed_transcript MGP_CBAJ_T0031027.1 MGP_CBAJ_G0018601.1 mouse_genomes_project 11 92774223 92781304 - Znhit3 protein_coding processed_transcript MGP_CBAJ_T0031028.1 MGP_CBAJ_G0018601.1 mouse_genomes_project 11 92780437 92781323 - Znhit3 protein_coding retained_intron MGP_CBAJ_T0029930.1 MGP_CBAJ_G0018324.1 mouse_genomes_project 11 76481349 76482450 - MGP_CBAJ_P0029930 Vmo1 protein_coding protein_coding MGP_CBAJ_T0006175.1 MGP_CBAJ_G0005152.1 mouse_genomes_project 11 76658736 76660452 - Gm12319 lincRNA lincRNA MGP_CBAJ_T0098664.1 MGP_CBAJ_G0036919.1 mouse_genomes_project 11 792894 793023 - Gm26393 snRNA snRNA MGP_CBAJ_T0033152.1 MGP_CBAJ_G0019120.1 mouse_genomes_project 11 128384586 128418159 + MGP_CBAJ_P0033152 Tmem94 protein_coding protein_coding MGP_CBAJ_T0033153.1 MGP_CBAJ_G0019120.1 mouse_genomes_project 11 128384595 128404868 + MGP_CBAJ_P0033153 Tmem94 protein_coding protein_coding MGP_CBAJ_T0033154.1 MGP_CBAJ_G0019120.1 mouse_genomes_project 11 128384596 128405192 + MGP_CBAJ_P0033154 Tmem94 protein_coding protein_coding MGP_CBAJ_T0033155.1 MGP_CBAJ_G0019120.1 mouse_genomes_project 11 128384607 128405111 + MGP_CBAJ_P0033155 Tmem94 protein_coding protein_coding MGP_CBAJ_T0033156.1 MGP_CBAJ_G0019120.1 mouse_genomes_project 11 128385861 128396518 + Tmem94 protein_coding processed_transcript MGP_CBAJ_T0033157.1 MGP_CBAJ_G0019120.1 mouse_genomes_project 11 128394904 128417826 + MGP_CBAJ_P0033157 Tmem94 protein_coding protein_coding MGP_CBAJ_T0033158.1 MGP_CBAJ_G0019120.1 mouse_genomes_project 11 128407872 128410767 + MGP_CBAJ_P0033158 Tmem94 protein_coding protein_coding MGP_CBAJ_T0098723.1 MGP_CBAJ_G0036978.1 mouse_genomes_project 11 105593804 105593988 - Gm22423 snRNA snRNA MGP_CBAJ_T0012431.1 MGP_CBAJ_G0010543.1 mouse_genomes_project 11 48424698 48425040 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0031956.1 MGP_CBAJ_G0018864.1 mouse_genomes_project 11 110539186 110545538 - MGP_CBAJ_P0031956 Krt9 protein_coding protein_coding MGP_CBAJ_T0012323.1 MGP_CBAJ_G0010435.1 mouse_genomes_project 11 4094776 4095165 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0031756.1 MGP_CBAJ_G0018779.1 mouse_genomes_project 11 108254293 108258527 - MGP_CBAJ_P0031756 Neurod2 protein_coding protein_coding MGP_CBAJ_T0003108.1 MGP_CBAJ_G0002888.1 mouse_genomes_project 11 63305644 63308608 + Gm10435 antisense antisense MGP_CBAJ_T0003109.1 MGP_CBAJ_G0002888.1 mouse_genomes_project 11 63305644 63308608 + Gm10435 antisense antisense MGP_CBAJ_T0032907.1 MGP_CBAJ_G0019066.1 mouse_genomes_project 11 122917546 122983776 + MGP_CBAJ_P0032907 Kcnj16 protein_coding protein_coding MGP_CBAJ_T0032908.1 MGP_CBAJ_G0019066.1 mouse_genomes_project 11 122917546 122983779 + MGP_CBAJ_P0032908 Kcnj16 protein_coding protein_coding MGP_CBAJ_T0032909.1 MGP_CBAJ_G0019066.1 mouse_genomes_project 11 122917577 122980665 + MGP_CBAJ_P0032909 Kcnj16 protein_coding protein_coding MGP_CBAJ_T0032910.1 MGP_CBAJ_G0019066.1 mouse_genomes_project 11 122953347 122983779 + MGP_CBAJ_P0032910 Kcnj16 protein_coding protein_coding MGP_CBAJ_T0032911.1 MGP_CBAJ_G0019066.1 mouse_genomes_project 11 122979702 122980554 + MGP_CBAJ_P0032911 Kcnj16 protein_coding protein_coding MGP_CBAJ_T0032912.1 MGP_CBAJ_G0019066.1 mouse_genomes_project 11 122979702 122983776 + MGP_CBAJ_P0032912 Kcnj16 protein_coding protein_coding MGP_CBAJ_T0028095.1 MGP_CBAJ_G0017849.1 mouse_genomes_project 11 31892540 31905331 - MGP_CBAJ_P0028095 Stc2 protein_coding protein_coding MGP_CBAJ_T0028096.1 MGP_CBAJ_G0017849.1 mouse_genomes_project 11 31893225 31904360 - Stc2 protein_coding processed_transcript MGP_CBAJ_T0028097.1 MGP_CBAJ_G0017849.1 mouse_genomes_project 11 31900700 31903423 - Stc2 protein_coding processed_transcript MGP_CBAJ_T0028098.1 MGP_CBAJ_G0017849.1 mouse_genomes_project 11 31903255 31905304 - Stc2 protein_coding processed_transcript MGP_CBAJ_T0028099.1 MGP_CBAJ_G0017849.1 mouse_genomes_project 11 31903259 31904313 - Stc2 protein_coding processed_transcript MGP_CBAJ_T0002493.1 MGP_CBAJ_G0002398.1 mouse_genomes_project 14 52074219 52074278 + MGP_CBAJ_P0002493 Traj30 TR_J_gene TR_J_gene MGP_CBAJ_T0098872.1 MGP_CBAJ_G0037127.1 mouse_genomes_project 14 116085950 116086053 + Gm26255 snRNA snRNA MGP_CBAJ_T0038529.1 MGP_CBAJ_G0020857.1 mouse_genomes_project 14 28584690 28587671 + Arhgap22 protein_coding processed_transcript MGP_CBAJ_T0038530.1 MGP_CBAJ_G0020857.1 mouse_genomes_project 14 28587487 28749999 + MGP_CBAJ_P0038530 Arhgap22 protein_coding protein_coding MGP_CBAJ_T0038531.1 MGP_CBAJ_G0020857.1 mouse_genomes_project 14 28623969 28645492 + Arhgap22 protein_coding processed_transcript MGP_CBAJ_T0038532.1 MGP_CBAJ_G0020857.1 mouse_genomes_project 14 28686251 28749997 + Arhgap22 protein_coding processed_transcript MGP_CBAJ_T0038533.1 MGP_CBAJ_G0020857.1 mouse_genomes_project 14 28699758 28749999 + MGP_CBAJ_P0038533 Arhgap22 protein_coding protein_coding MGP_CBAJ_T0038534.1 MGP_CBAJ_G0020857.1 mouse_genomes_project 14 28731372 28742636 + Arhgap22 protein_coding processed_transcript MGP_CBAJ_T0038535.1 MGP_CBAJ_G0020857.1 mouse_genomes_project 14 28742357 28744537 + Arhgap22 protein_coding processed_transcript MGP_CBAJ_T0038536.1 MGP_CBAJ_G0020857.1 mouse_genomes_project 14 28742436 28743386 + Arhgap22 protein_coding processed_transcript MGP_CBAJ_T0002610.1 MGP_CBAJ_G0002498.1 mouse_genomes_project 14 52033354 52033987 - MGP_CBAJ_P0002610 Trdv5 TR_V_gene TR_V_gene MGP_CBAJ_T0098855.1 MGP_CBAJ_G0037110.1 mouse_genomes_project 14 83550273 83550437 - Gm22891 snRNA snRNA MGP_CBAJ_T0038202.1 MGP_CBAJ_G0020776.1 mouse_genomes_project 14 20408339 20424914 + Cphx1 protein_coding processed_transcript MGP_CBAJ_T0038206.1 MGP_CBAJ_G0020776.1 mouse_genomes_project 14 20412526 20426320 + MGP_CBAJ_P0038206 Cphx1 protein_coding protein_coding MGP_CBAJ_T0038208.1 MGP_CBAJ_G0020776.1 mouse_genomes_project 14 20421787 20425195 + Cphx1 protein_coding retained_intron MGP_CBAJ_T0038209.1 MGP_CBAJ_G0020776.1 mouse_genomes_project 14 20424631 20425111 + Cphx1 protein_coding retained_intron MGP_CBAJ_T0038676.1 MGP_CBAJ_G0020914.1 mouse_genomes_project 14 43556648 43568352 - MGP_CBAJ_P0038676 Cnih1 protein_coding unknown_likely_coding MGP_CBAJ_T0039016.1 MGP_CBAJ_G0021018.1 mouse_genomes_project 14 52333025 52333881 + Mrpl52 protein_coding retained_intron MGP_CBAJ_T0039017.1 MGP_CBAJ_G0021018.1 mouse_genomes_project 14 52333026 52333541 + Mrpl52 protein_coding retained_intron MGP_CBAJ_T0039018.1 MGP_CBAJ_G0021018.1 mouse_genomes_project 14 52333036 52335825 + MGP_CBAJ_P0039018 Mrpl52 protein_coding protein_coding MGP_CBAJ_T0039019.1 MGP_CBAJ_G0021018.1 mouse_genomes_project 14 52333143 52335843 + Mrpl52 protein_coding retained_intron MGP_CBAJ_T0039020.1 MGP_CBAJ_G0021018.1 mouse_genomes_project 14 52333154 52335846 + MGP_CBAJ_P0039020 Mrpl52 protein_coding protein_coding MGP_CBAJ_T0101645.1 MGP_CBAJ_G0039676.1 mouse_genomes_project 14 49334801 49335264 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0037938.1 MGP_CBAJ_G0020701.1 mouse_genomes_project 14 5096703 5612493 - MGP_CBAJ_P0037938 Cadps protein_coding protein_coding MGP_CBAJ_T0037939.1 MGP_CBAJ_G0020701.1 mouse_genomes_project 14 5096705 5612493 - MGP_CBAJ_P0037939 Cadps protein_coding protein_coding MGP_CBAJ_T0037940.1 MGP_CBAJ_G0020701.1 mouse_genomes_project 14 5096705 5612493 - MGP_CBAJ_P0037940 Cadps protein_coding protein_coding MGP_CBAJ_T0037941.1 MGP_CBAJ_G0020701.1 mouse_genomes_project 14 5096705 5612493 - MGP_CBAJ_P0037941 Cadps protein_coding protein_coding MGP_CBAJ_T0039933.1 MGP_CBAJ_G0021342.1 mouse_genomes_project 14 107946326 108002258 + MGP_CBAJ_P0039933 Slain1 protein_coding protein_coding MGP_CBAJ_T0039934.1 MGP_CBAJ_G0021342.1 mouse_genomes_project 14 107946744 108001661 + MGP_CBAJ_P0039934 Slain1 protein_coding protein_coding MGP_CBAJ_T0039935.1 MGP_CBAJ_G0021342.1 mouse_genomes_project 14 107951867 107985775 + MGP_CBAJ_P0039935 Slain1 protein_coding protein_coding MGP_CBAJ_T0039936.1 MGP_CBAJ_G0021342.1 mouse_genomes_project 14 107960582 108002153 + MGP_CBAJ_P0039936 Slain1 protein_coding protein_coding MGP_CBAJ_T0040017.1 MGP_CBAJ_G0021380.1 mouse_genomes_project 14 129335602 129396245 + MGP_CBAJ_P0040017 Tm9sf2 protein_coding protein_coding MGP_CBAJ_T0040018.1 MGP_CBAJ_G0021380.1 mouse_genomes_project 14 129335702 129370267 + MGP_CBAJ_P0040018 Tm9sf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040019.1 MGP_CBAJ_G0021380.1 mouse_genomes_project 14 129335832 129395363 + MGP_CBAJ_P0040019 Tm9sf2 protein_coding protein_coding MGP_CBAJ_T0039477.1 MGP_CBAJ_G0021175.1 mouse_genomes_project 14 63083892 63090951 + MGP_CBAJ_P0039477 Sox7 protein_coding protein_coding MGP_CBAJ_T0039869.1 MGP_CBAJ_G0021322.1 mouse_genomes_project 14 99516738 99959423 - MGP_CBAJ_P0039869 Klhl1 protein_coding protein_coding MGP_CBAJ_T0002656.1 MGP_CBAJ_G0002536.1 mouse_genomes_project 14 51122366 51122856 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0009860.1 MGP_CBAJ_G0007998.1 mouse_genomes_project 14 42313197 42313290 - Mir5131 miRNA miRNA MGP_CBAJ_T0039261.1 MGP_CBAJ_G0021080.1 mouse_genomes_project 14 53869243 53875845 + MGP_CBAJ_P0039261 Ltb4r1 protein_coding protein_coding MGP_CBAJ_T0038629.1 MGP_CBAJ_G0020897.1 mouse_genomes_project 14 37361571 37380609 + MGP_CBAJ_P0038629 Mat1a protein_coding protein_coding MGP_CBAJ_T0097952.1 MGP_CBAJ_G0036225.1 mouse_genomes_project 14 76046570 76046662 - Gm24876 rRNA rRNA MGP_CBAJ_T0039407.1 MGP_CBAJ_G0021144.1 mouse_genomes_project 14 59497208 59619995 + MGP_CBAJ_P0039407 Mipep protein_coding protein_coding MGP_CBAJ_T0038275.1 MGP_CBAJ_G0020799.1 mouse_genomes_project 14 23870578 23886006 + MGP_CBAJ_P0038275 Lrtm1 protein_coding protein_coding MGP_CBAJ_T0039486.1 MGP_CBAJ_G0021180.1 mouse_genomes_project 14 63267659 63277048 + MGP_CBAJ_P0039486 Prss52 protein_coding protein_coding MGP_CBAJ_T0039508.1 MGP_CBAJ_G0021190.1 mouse_genomes_project 14 64821015 64885744 - MGP_CBAJ_P0039508 Elp3 protein_coding protein_coding MGP_CBAJ_T0006640.1 MGP_CBAJ_G0005481.1 mouse_genomes_project 14 126636251 126638591 + 1700006F04Rik lincRNA lincRNA MGP_CBAJ_T0038767.1 MGP_CBAJ_G0020933.1 mouse_genomes_project 14 46321165 46345898 - MGP_CBAJ_P0038767 1700011H14Rik protein_coding unknown_likely_coding MGP_CBAJ_T0038768.1 MGP_CBAJ_G0020933.1 mouse_genomes_project 14 46325041 46346069 - MGP_CBAJ_P0038768 1700011H14Rik protein_coding protein_coding MGP_CBAJ_T0038769.1 MGP_CBAJ_G0020933.1 mouse_genomes_project 14 46325275 46346038 - MGP_CBAJ_P0038769 1700011H14Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0038770.1 MGP_CBAJ_G0020933.1 mouse_genomes_project 14 46331491 46346038 - MGP_CBAJ_P0038770 1700011H14Rik protein_coding protein_coding MGP_CBAJ_T0002449.1 MGP_CBAJ_G0002361.1 mouse_genomes_project 14 52025686 52033561 + MGP_CBAJ_P0002449 Trdc TR_C_gene TR_C_gene MGP_CBAJ_T0039041.1 MGP_CBAJ_G0021025.1 mouse_genomes_project 14 52520209 52544757 - MGP_CBAJ_P0039041 4931414P19Rik protein_coding protein_coding MGP_CBAJ_T0038029.1 MGP_CBAJ_G0020732.1 mouse_genomes_project 14 14223655 14244358 + MGP_CBAJ_P0038029 Nudt13 protein_coding unknown_likely_coding MGP_CBAJ_T0038265.1 MGP_CBAJ_G0020795.1 mouse_genomes_project 14 22199013 22229552 - MGP_CBAJ_P0038265 Ccdc66 protein_coding protein_coding MGP_CBAJ_T0100140.1 MGP_CBAJ_G0038395.1 mouse_genomes_project 14 115114399 115114529 - Gm25901 snoRNA snoRNA MGP_CBAJ_T0100094.1 MGP_CBAJ_G0038349.1 mouse_genomes_project 14 26113501 26113577 - Snord19 snoRNA snoRNA MGP_CBAJ_T0017175.1 MGP_CBAJ_G0015028.1 mouse_genomes_project 14 129332027 129335518 - A330035P11Rik processed_transcript processed_transcript MGP_CBAJ_T0017176.1 MGP_CBAJ_G0015028.1 mouse_genomes_project 14 129332940 129335539 - A330035P11Rik processed_transcript processed_transcript MGP_CBAJ_T0012816.1 MGP_CBAJ_G0010928.1 mouse_genomes_project 14 20260247 20260494 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098852.1 MGP_CBAJ_G0037107.1 mouse_genomes_project 14 70131083 70131185 - Gm24890 snRNA snRNA MGP_CBAJ_T0039073.1 MGP_CBAJ_G0021032.1 mouse_genomes_project 14 52645621 52650193 + MGP_CBAJ_P0039073 1700123O20Rik protein_coding protein_coding MGP_CBAJ_T0039369.1 MGP_CBAJ_G0021130.1 mouse_genomes_project 14 57765491 57920849 - protein_coding retained_intron MGP_CBAJ_T0039370.1 MGP_CBAJ_G0021130.1 mouse_genomes_project 14 57765491 57920853 - MGP_CBAJ_P0039370 protein_coding protein_coding MGP_CBAJ_T0039373.1 MGP_CBAJ_G0021130.1 mouse_genomes_project 14 57899846 57920819 - MGP_CBAJ_P0039373 protein_coding protein_coding MGP_CBAJ_T0006572.1 MGP_CBAJ_G0005432.1 mouse_genomes_project 14 20947439 20986390 + 4933413J09Rik lincRNA lincRNA MGP_CBAJ_T0006573.1 MGP_CBAJ_G0005432.1 mouse_genomes_project 14 20948412 21003575 + 4933413J09Rik lincRNA lincRNA MGP_CBAJ_T0006574.1 MGP_CBAJ_G0005432.1 mouse_genomes_project 14 20948445 20979840 + 4933413J09Rik lincRNA lincRNA MGP_CBAJ_T0006575.1 MGP_CBAJ_G0005432.1 mouse_genomes_project 14 20953496 20980958 + 4933413J09Rik lincRNA lincRNA MGP_CBAJ_T0006576.1 MGP_CBAJ_G0005432.1 mouse_genomes_project 14 20955253 20980856 + 4933413J09Rik lincRNA lincRNA MGP_CBAJ_T0006577.1 MGP_CBAJ_G0005432.1 mouse_genomes_project 14 20955253 20999761 + 4933413J09Rik lincRNA lincRNA MGP_CBAJ_T0038714.1 MGP_CBAJ_G0020925.1 mouse_genomes_project 14 44420573 44455638 - MGP_CBAJ_P0038714 Atg14 protein_coding protein_coding MGP_CBAJ_T0037986.1 MGP_CBAJ_G0020719.1 mouse_genomes_project 14 11061576 11497494 + MGP_CBAJ_P0037986 Thrb protein_coding protein_coding MGP_CBAJ_T0037987.1 MGP_CBAJ_G0020719.1 mouse_genomes_project 14 11061576 11499041 + MGP_CBAJ_P0037987 Thrb protein_coding protein_coding MGP_CBAJ_T0037988.1 MGP_CBAJ_G0020719.1 mouse_genomes_project 14 11437840 11499039 + MGP_CBAJ_P0037988 Thrb protein_coding protein_coding MGP_CBAJ_T0039670.1 MGP_CBAJ_G0021249.1 mouse_genomes_project 14 70227872 70231013 - MGP_CBAJ_P0039670 Sftpc protein_coding protein_coding MGP_CBAJ_T0037898.1 MGP_CBAJ_G0020688.1 mouse_genomes_project 14 429973 445211 + MGP_CBAJ_P0037898 protein_coding protein_coding MGP_CBAJ_T0037899.1 MGP_CBAJ_G0020688.1 mouse_genomes_project 14 443428 443905 + MGP_CBAJ_P0037899 protein_coding protein_coding MGP_CBAJ_T0002659.1 MGP_CBAJ_G0002539.1 mouse_genomes_project 14 51719293 51719845 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0039290.1 MGP_CBAJ_G0021104.1 mouse_genomes_project 14 54725465 54772753 - MGP_CBAJ_P0039290 Cenpj protein_coding protein_coding MGP_CBAJ_T0039291.1 MGP_CBAJ_G0021104.1 mouse_genomes_project 14 54725487 54772729 - MGP_CBAJ_P0039291 Cenpj protein_coding unknown_likely_coding MGP_CBAJ_T0009880.1 MGP_CBAJ_G0008018.1 mouse_genomes_project 14 69277027 69277100 + Mir6950 miRNA miRNA MGP_CBAJ_T0039755.1 MGP_CBAJ_G0021275.1 mouse_genomes_project 14 75208223 75250269 + MGP_CBAJ_P0039755 5031414D18Rik protein_coding protein_coding MGP_CBAJ_T0038246.1 MGP_CBAJ_G0020787.1 mouse_genomes_project 14 21311915 21441662 + MGP_CBAJ_P0038246 Dnah12 protein_coding protein_coding MGP_CBAJ_T0038247.1 MGP_CBAJ_G0020787.1 mouse_genomes_project 14 21312087 21529228 + MGP_CBAJ_P0038247 Dnah12 protein_coding unknown_likely_coding MGP_CBAJ_T0038248.1 MGP_CBAJ_G0020787.1 mouse_genomes_project 14 21392496 21395240 + MGP_CBAJ_P0038248 Dnah12 protein_coding protein_coding MGP_CBAJ_T0038249.1 MGP_CBAJ_G0020787.1 mouse_genomes_project 14 21459011 21529297 + MGP_CBAJ_P0038249 Dnah12 protein_coding protein_coding MGP_CBAJ_T0009888.1 MGP_CBAJ_G0008026.1 mouse_genomes_project 14 100580033 100580138 - Gm27441 miRNA miRNA MGP_CBAJ_T0039979.1 MGP_CBAJ_G0021364.1 mouse_genomes_project 14 125632566 125681568 - MGP_CBAJ_P0039979 Dzip1 protein_coding protein_coding MGP_CBAJ_T0039980.1 MGP_CBAJ_G0021364.1 mouse_genomes_project 14 125633154 125683716 - MGP_CBAJ_P0039980 Dzip1 protein_coding protein_coding MGP_CBAJ_T0038989.1 MGP_CBAJ_G0021012.1 mouse_genomes_project 14 50097939 50103661 - MGP_CBAJ_P0038989 Olfr1507 protein_coding protein_coding MGP_CBAJ_T0038990.1 MGP_CBAJ_G0021012.1 mouse_genomes_project 14 50097939 50099051 - MGP_CBAJ_P0038990 Olfr1507 protein_coding protein_coding MGP_CBAJ_T0038991.1 MGP_CBAJ_G0021012.1 mouse_genomes_project 14 50098482 50103263 - MGP_CBAJ_P0038991 Olfr1507 protein_coding protein_coding MGP_CBAJ_T0038992.1 MGP_CBAJ_G0021012.1 mouse_genomes_project 14 50098494 50103657 - MGP_CBAJ_P0038992 Olfr1507 protein_coding protein_coding MGP_CBAJ_T0038993.1 MGP_CBAJ_G0021012.1 mouse_genomes_project 14 50098503 50103291 - MGP_CBAJ_P0038993 Olfr1507 protein_coding protein_coding MGP_CBAJ_T0038994.1 MGP_CBAJ_G0021012.1 mouse_genomes_project 14 50098899 50103655 - MGP_CBAJ_P0038994 Olfr1507 protein_coding protein_coding MGP_CBAJ_T0012840.1 MGP_CBAJ_G0010952.1 mouse_genomes_project 14 50117869 50118437 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006609.1 MGP_CBAJ_G0005457.1 mouse_genomes_project 14 56421200 56425573 + 3110083C13Rik lincRNA lincRNA MGP_CBAJ_T0038239.1 MGP_CBAJ_G0020785.1 mouse_genomes_project 14 21251816 21277183 + MGP_CBAJ_P0038239 Arf4 protein_coding protein_coding MGP_CBAJ_T0038240.1 MGP_CBAJ_G0020785.1 mouse_genomes_project 14 21251968 21276726 + MGP_CBAJ_P0038240 Arf4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038241.1 MGP_CBAJ_G0020785.1 mouse_genomes_project 14 21251995 21276733 + Arf4 protein_coding processed_transcript MGP_CBAJ_T0038242.1 MGP_CBAJ_G0020785.1 mouse_genomes_project 14 21252089 21276739 + MGP_CBAJ_P0038242 Arf4 protein_coding protein_coding MGP_CBAJ_T0038243.1 MGP_CBAJ_G0020785.1 mouse_genomes_project 14 21272935 21273782 + Arf4 protein_coding retained_intron MGP_CBAJ_T0038244.1 MGP_CBAJ_G0020785.1 mouse_genomes_project 14 21273055 21284961 + MGP_CBAJ_P0038244 Arf4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039074.1 MGP_CBAJ_G0021033.1 mouse_genomes_project 14 52681348 52683157 - MGP_CBAJ_P0039074 Cebpe protein_coding protein_coding MGP_CBAJ_T0039203.1 MGP_CBAJ_G0021065.1 mouse_genomes_project 14 53688217 53698190 + MGP_CBAJ_P0039203 Irf9 protein_coding protein_coding MGP_CBAJ_T0039204.1 MGP_CBAJ_G0021065.1 mouse_genomes_project 14 53688631 53698190 + MGP_CBAJ_P0039204 Irf9 protein_coding protein_coding MGP_CBAJ_T0039205.1 MGP_CBAJ_G0021065.1 mouse_genomes_project 14 53689223 53694020 + Irf9 protein_coding retained_intron MGP_CBAJ_T0039206.1 MGP_CBAJ_G0021065.1 mouse_genomes_project 14 53689225 53698190 + MGP_CBAJ_P0039206 Irf9 protein_coding protein_coding MGP_CBAJ_T0039207.1 MGP_CBAJ_G0021065.1 mouse_genomes_project 14 53693979 53698187 + Irf9 protein_coding retained_intron MGP_CBAJ_T0039208.1 MGP_CBAJ_G0021065.1 mouse_genomes_project 14 53695434 53696893 + Irf9 protein_coding retained_intron MGP_CBAJ_T0011242.1 MGP_CBAJ_G0009380.1 mouse_genomes_project 14 26994164 26994462 - Gm22876 misc_RNA misc_RNA MGP_CBAJ_T0039809.1 MGP_CBAJ_G0021294.1 mouse_genomes_project 14 77693318 78300351 + MGP_CBAJ_P0039809 Enox1 protein_coding protein_coding MGP_CBAJ_T0012864.1 MGP_CBAJ_G0010976.1 mouse_genomes_project 14 74906684 74920375 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0038853.1 MGP_CBAJ_G0020984.1 mouse_genomes_project 14 48710982 48717314 + MGP_CBAJ_P0038853 protein_coding protein_coding MGP_CBAJ_T0038859.1 MGP_CBAJ_G0020989.1 mouse_genomes_project 14 49379342 49386319 + MGP_CBAJ_P0038859 Mettl17 protein_coding protein_coding MGP_CBAJ_T0038860.1 MGP_CBAJ_G0020989.1 mouse_genomes_project 14 49379376 49386311 + Mettl17 protein_coding retained_intron MGP_CBAJ_T0038861.1 MGP_CBAJ_G0020989.1 mouse_genomes_project 14 49379378 49384040 + MGP_CBAJ_P0038861 Mettl17 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038862.1 MGP_CBAJ_G0020989.1 mouse_genomes_project 14 49379389 49386244 + Mettl17 protein_coding retained_intron MGP_CBAJ_T0038863.1 MGP_CBAJ_G0020989.1 mouse_genomes_project 14 49379389 49386244 + MGP_CBAJ_P0038863 Mettl17 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038864.1 MGP_CBAJ_G0020989.1 mouse_genomes_project 14 49379389 49386244 + MGP_CBAJ_P0038864 Mettl17 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038865.1 MGP_CBAJ_G0020989.1 mouse_genomes_project 14 49379412 49383758 + Mettl17 protein_coding retained_intron MGP_CBAJ_T0038866.1 MGP_CBAJ_G0020989.1 mouse_genomes_project 14 49379418 49380159 + Mettl17 protein_coding retained_intron MGP_CBAJ_T0038867.1 MGP_CBAJ_G0020989.1 mouse_genomes_project 14 49379435 49387288 + Mettl17 protein_coding retained_intron MGP_CBAJ_T0038868.1 MGP_CBAJ_G0020989.1 mouse_genomes_project 14 49379438 49383354 + Mettl17 protein_coding retained_intron MGP_CBAJ_T0038869.1 MGP_CBAJ_G0020989.1 mouse_genomes_project 14 49379446 49383354 + MGP_CBAJ_P0038869 Mettl17 protein_coding protein_coding MGP_CBAJ_T0038870.1 MGP_CBAJ_G0020989.1 mouse_genomes_project 14 49379446 49386186 + MGP_CBAJ_P0038870 Mettl17 protein_coding protein_coding MGP_CBAJ_T0038871.1 MGP_CBAJ_G0020989.1 mouse_genomes_project 14 49379452 49381754 + Mettl17 protein_coding retained_intron MGP_CBAJ_T0038872.1 MGP_CBAJ_G0020989.1 mouse_genomes_project 14 49379454 49380163 + Mettl17 protein_coding retained_intron MGP_CBAJ_T0038873.1 MGP_CBAJ_G0020989.1 mouse_genomes_project 14 49379902 49385178 + MGP_CBAJ_P0038873 Mettl17 protein_coding protein_coding MGP_CBAJ_T0038874.1 MGP_CBAJ_G0020989.1 mouse_genomes_project 14 49381660 49383469 + Mettl17 protein_coding retained_intron MGP_CBAJ_T0039832.1 MGP_CBAJ_G0021307.1 mouse_genomes_project 14 80209494 80216995 + MGP_CBAJ_P0039832 Kbtbd7 protein_coding protein_coding MGP_CBAJ_T0038020.1 MGP_CBAJ_G0020728.1 mouse_genomes_project 14 13732814 13867976 - MGP_CBAJ_P0038020 Gng2 protein_coding protein_coding MGP_CBAJ_T0038021.1 MGP_CBAJ_G0020728.1 mouse_genomes_project 14 13735922 13867899 - MGP_CBAJ_P0038021 Gng2 protein_coding protein_coding MGP_CBAJ_T0038022.1 MGP_CBAJ_G0020728.1 mouse_genomes_project 14 13735922 13868354 - MGP_CBAJ_P0038022 Gng2 protein_coding protein_coding MGP_CBAJ_T0038023.1 MGP_CBAJ_G0020728.1 mouse_genomes_project 14 13735963 13867810 - MGP_CBAJ_P0038023 Gng2 protein_coding protein_coding MGP_CBAJ_T0038024.1 MGP_CBAJ_G0020728.1 mouse_genomes_project 14 13736006 13867911 - MGP_CBAJ_P0038024 Gng2 protein_coding protein_coding MGP_CBAJ_T0038025.1 MGP_CBAJ_G0020728.1 mouse_genomes_project 14 13736060 13867444 - MGP_CBAJ_P0038025 Gng2 protein_coding protein_coding MGP_CBAJ_T0003444.1 MGP_CBAJ_G0003139.1 mouse_genomes_project 14 14508113 14529165 + 1810062O18Rik antisense antisense MGP_CBAJ_T0003445.1 MGP_CBAJ_G0003139.1 mouse_genomes_project 14 14508148 14534703 + 1810062O18Rik antisense antisense MGP_CBAJ_T0003446.1 MGP_CBAJ_G0003139.1 mouse_genomes_project 14 14508291 14529133 + 1810062O18Rik antisense antisense MGP_CBAJ_T0003447.1 MGP_CBAJ_G0003139.1 mouse_genomes_project 14 14508327 14534843 + 1810062O18Rik antisense antisense MGP_CBAJ_T0003448.1 MGP_CBAJ_G0003139.1 mouse_genomes_project 14 14529170 14534850 + 1810062O18Rik antisense antisense MGP_CBAJ_T0002470.1 MGP_CBAJ_G0002377.1 mouse_genomes_project 14 52047305 52047371 + MGP_CBAJ_P0002470 Traj53 TR_J_gene TR_J_gene MGP_CBAJ_T0038261.1 MGP_CBAJ_G0020792.1 mouse_genomes_project 14 21897506 21901822 + MGP_CBAJ_P0038261 protein_coding protein_coding MGP_CBAJ_T0038555.1 MGP_CBAJ_G0020868.1 mouse_genomes_project 14 29503355 29517886 + MGP_CBAJ_P0038555 Anxa8 protein_coding protein_coding MGP_CBAJ_T0038556.1 MGP_CBAJ_G0020868.1 mouse_genomes_project 14 29503399 29517336 + MGP_CBAJ_P0038556 Anxa8 protein_coding protein_coding MGP_CBAJ_T0038237.1 MGP_CBAJ_G0020784.1 mouse_genomes_project 14 21191938 21240469 + MGP_CBAJ_P0038237 Dennd6a protein_coding protein_coding MGP_CBAJ_T0038238.1 MGP_CBAJ_G0020784.1 mouse_genomes_project 14 21191955 21246387 + MGP_CBAJ_P0038238 Dennd6a protein_coding protein_coding MGP_CBAJ_T0038003.1 MGP_CBAJ_G0020724.1 mouse_genomes_project 14 12102083 12426438 - MGP_CBAJ_P0038003 Ube2e2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038004.1 MGP_CBAJ_G0020724.1 mouse_genomes_project 14 12102085 12431799 - MGP_CBAJ_P0038004 Ube2e2 protein_coding protein_coding MGP_CBAJ_T0038005.1 MGP_CBAJ_G0020724.1 mouse_genomes_project 14 12102550 12426286 - MGP_CBAJ_P0038005 Ube2e2 protein_coding protein_coding MGP_CBAJ_T0038006.1 MGP_CBAJ_G0020724.1 mouse_genomes_project 14 12102803 12426430 - MGP_CBAJ_P0038006 Ube2e2 protein_coding protein_coding MGP_CBAJ_T0038007.1 MGP_CBAJ_G0020724.1 mouse_genomes_project 14 12102872 12126552 - Ube2e2 protein_coding processed_transcript MGP_CBAJ_T0038008.1 MGP_CBAJ_G0020724.1 mouse_genomes_project 14 12102872 12426382 - MGP_CBAJ_P0038008 Ube2e2 protein_coding protein_coding MGP_CBAJ_T0038009.1 MGP_CBAJ_G0020724.1 mouse_genomes_project 14 12119784 12204781 - Ube2e2 protein_coding processed_transcript MGP_CBAJ_T0038010.1 MGP_CBAJ_G0020724.1 mouse_genomes_project 14 12119784 12431399 - MGP_CBAJ_P0038010 Ube2e2 protein_coding protein_coding MGP_CBAJ_T0038011.1 MGP_CBAJ_G0020724.1 mouse_genomes_project 14 12126444 12431741 - Ube2e2 protein_coding processed_transcript MGP_CBAJ_T0038012.1 MGP_CBAJ_G0020724.1 mouse_genomes_project 14 12163851 12431653 - MGP_CBAJ_P0038012 Ube2e2 protein_coding protein_coding MGP_CBAJ_T0038013.1 MGP_CBAJ_G0020724.1 mouse_genomes_project 14 12163863 12432314 - MGP_CBAJ_P0038013 Ube2e2 protein_coding protein_coding MGP_CBAJ_T0038014.1 MGP_CBAJ_G0020724.1 mouse_genomes_project 14 12163921 12431653 - Ube2e2 protein_coding processed_transcript MGP_CBAJ_T0038015.1 MGP_CBAJ_G0020724.1 mouse_genomes_project 14 12171889 12431716 - Ube2e2 protein_coding processed_transcript MGP_CBAJ_T0038016.1 MGP_CBAJ_G0020724.1 mouse_genomes_project 14 12424359 12431264 - Ube2e2 protein_coding retained_intron MGP_CBAJ_T0012884.1 MGP_CBAJ_G0010996.1 mouse_genomes_project 14 131406126 131406667 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0038779.1 MGP_CBAJ_G0020937.1 mouse_genomes_project 14 47042643 47043649 - MGP_CBAJ_P0038779 protein_coding protein_coding MGP_CBAJ_T0039590.1 MGP_CBAJ_G0021215.1 mouse_genomes_project 14 67336367 67340564 + MGP_CBAJ_P0039590 Gnrh1 protein_coding protein_coding MGP_CBAJ_T0003491.1 MGP_CBAJ_G0003173.1 mouse_genomes_project 14 62712435 62717282 - Gm15918 antisense antisense MGP_CBAJ_T0098828.1 MGP_CBAJ_G0037083.1 mouse_genomes_project 14 14678449 14678556 + Gm25328 snRNA snRNA MGP_CBAJ_T0039848.1 MGP_CBAJ_G0021315.1 mouse_genomes_project 14 80850666 80875387 + MGP_CBAJ_P0039848 Olfm4 protein_coding protein_coding MGP_CBAJ_T0039849.1 MGP_CBAJ_G0021315.1 mouse_genomes_project 14 80850689 80875387 + MGP_CBAJ_P0039849 Olfm4 protein_coding unknown_likely_coding MGP_CBAJ_T0000892.1 MGP_CBAJ_G0000827.1 mouse_genomes_project 14 95196228 95196599 + TEC TEC MGP_CBAJ_T0040054.1 MGP_CBAJ_G0021389.1 mouse_genomes_project 14 130657077 131042478 - MGP_CBAJ_P0040054 Nalcn protein_coding protein_coding MGP_CBAJ_T0038882.1 MGP_CBAJ_G0020993.1 mouse_genomes_project 14 49427954 49428568 - MGP_CBAJ_P0038882 Rnase13 protein_coding protein_coding MGP_CBAJ_T0002475.1 MGP_CBAJ_G0002381.1 mouse_genomes_project 14 52054350 52054411 + MGP_CBAJ_P0002475 Traj48 TR_J_gene TR_J_gene MGP_CBAJ_T0002476.1 MGP_CBAJ_G0002381.1 mouse_genomes_project 14 52054351 52054411 + Traj48 TR_J_gene processed_transcript MGP_CBAJ_T0002596.1 MGP_CBAJ_G0002488.1 mouse_genomes_project 14 51606830 51607437 + MGP_CBAJ_P0002596 B230359F08Rik TR_V_gene TR_V_gene MGP_CBAJ_T0039532.1 MGP_CBAJ_G0021198.1 mouse_genomes_project 14 65338202 65363244 - MGP_CBAJ_P0039532 Gulo protein_coding protein_coding MGP_CBAJ_T0039880.1 MGP_CBAJ_G0021330.1 mouse_genomes_project 14 105298086 105300466 - MGP_CBAJ_P0039880 Prr30 protein_coding protein_coding MGP_CBAJ_T0039881.1 MGP_CBAJ_G0021330.1 mouse_genomes_project 14 105298094 105300727 - MGP_CBAJ_P0039881 Prr30 protein_coding protein_coding MGP_CBAJ_T0039245.1 MGP_CBAJ_G0021072.1 mouse_genomes_project 14 53770673 53778951 + MGP_CBAJ_P0039245 Gmpr2 protein_coding protein_coding MGP_CBAJ_T0006622.1 MGP_CBAJ_G0005466.1 mouse_genomes_project 14 69110213 69119299 - Gm27174 lincRNA lincRNA MGP_CBAJ_T0038569.1 MGP_CBAJ_G0020875.1 mouse_genomes_project 14 29837867 29842383 - MGP_CBAJ_P0038569 Sncg protein_coding protein_coding MGP_CBAJ_T0039737.1 MGP_CBAJ_G0021268.1 mouse_genomes_project 14 73508737 73517235 + MGP_CBAJ_P0039737 Med4 protein_coding protein_coding MGP_CBAJ_T0038837.1 MGP_CBAJ_G0020972.1 mouse_genomes_project 14 48272385 48275393 + MGP_CBAJ_P0038837 Rnase10 protein_coding protein_coding MGP_CBAJ_T0038838.1 MGP_CBAJ_G0020972.1 mouse_genomes_project 14 48272563 48275393 + MGP_CBAJ_P0038838 Rnase10 protein_coding protein_coding MGP_CBAJ_T0002593.1 MGP_CBAJ_G0002486.1 mouse_genomes_project 14 51560520 51560799 + MGP_CBAJ_P0002593 TR_V_gene TR_V_gene MGP_CBAJ_T0000880.1 MGP_CBAJ_G0000815.1 mouse_genomes_project 14 60485134 60488046 - TEC TEC MGP_CBAJ_T0038844.1 MGP_CBAJ_G0020978.1 mouse_genomes_project 14 48364051 48378968 + MGP_CBAJ_P0038844 Rnase4 protein_coding protein_coding MGP_CBAJ_T0038846.1 MGP_CBAJ_G0020978.1 mouse_genomes_project 14 48368709 48378968 + MGP_CBAJ_P0038846 Rnase4 protein_coding protein_coding MGP_CBAJ_T0038693.1 MGP_CBAJ_G0020919.1 mouse_genomes_project 14 44073435 44112613 - MGP_CBAJ_P0038693 Wdhd1 protein_coding protein_coding MGP_CBAJ_T0038694.1 MGP_CBAJ_G0020919.1 mouse_genomes_project 14 44073435 44112655 - MGP_CBAJ_P0038694 Wdhd1 protein_coding protein_coding MGP_CBAJ_T0038695.1 MGP_CBAJ_G0020919.1 mouse_genomes_project 14 44073436 44112680 - MGP_CBAJ_P0038695 Wdhd1 protein_coding protein_coding MGP_CBAJ_T0038696.1 MGP_CBAJ_G0020919.1 mouse_genomes_project 14 44074110 44112420 - MGP_CBAJ_P0038696 Wdhd1 protein_coding unknown_likely_coding MGP_CBAJ_T0038697.1 MGP_CBAJ_G0020919.1 mouse_genomes_project 14 44090207 44112655 - MGP_CBAJ_P0038697 Wdhd1 protein_coding protein_coding MGP_CBAJ_T0038698.1 MGP_CBAJ_G0020919.1 mouse_genomes_project 14 44108269 44112630 - Wdhd1 protein_coding retained_intron MGP_CBAJ_T0039406.1 MGP_CBAJ_G0021143.1 mouse_genomes_project 14 59475482 59493628 + MGP_CBAJ_P0039406 C1qtnf9 protein_coding protein_coding MGP_CBAJ_T0012881.1 MGP_CBAJ_G0010993.1 mouse_genomes_project 14 129739647 129744492 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0038548.1 MGP_CBAJ_G0020861.1 mouse_genomes_project 14 29336250 29347944 + MGP_CBAJ_P0038548 Gdf10 protein_coding protein_coding MGP_CBAJ_T0098869.1 MGP_CBAJ_G0037124.1 mouse_genomes_project 14 109750436 109750544 - Gm24207 snRNA snRNA MGP_CBAJ_T0039826.1 MGP_CBAJ_G0021305.1 mouse_genomes_project 14 80103129 80117280 - Naa16 protein_coding retained_intron MGP_CBAJ_T0039827.1 MGP_CBAJ_G0021305.1 mouse_genomes_project 14 80103432 80169983 - MGP_CBAJ_P0039827 Naa16 protein_coding protein_coding MGP_CBAJ_T0039828.1 MGP_CBAJ_G0021305.1 mouse_genomes_project 14 80115059 80166293 - MGP_CBAJ_P0039828 Naa16 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039829.1 MGP_CBAJ_G0021305.1 mouse_genomes_project 14 80147471 80169895 - MGP_CBAJ_P0039829 Naa16 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039830.1 MGP_CBAJ_G0021305.1 mouse_genomes_project 14 80163791 80169893 - Naa16 protein_coding retained_intron MGP_CBAJ_T0039358.1 MGP_CBAJ_G0021129.1 mouse_genomes_project 14 57718467 57746925 + MGP_CBAJ_P0039358 Rcbtb1 protein_coding protein_coding MGP_CBAJ_T0039359.1 MGP_CBAJ_G0021129.1 mouse_genomes_project 14 57718486 57763993 + MGP_CBAJ_P0039359 Rcbtb1 protein_coding protein_coding MGP_CBAJ_T0039360.1 MGP_CBAJ_G0021129.1 mouse_genomes_project 14 57718492 57759238 + MGP_CBAJ_P0039360 Rcbtb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039361.1 MGP_CBAJ_G0021129.1 mouse_genomes_project 14 57718500 57763993 + MGP_CBAJ_P0039361 Rcbtb1 protein_coding protein_coding MGP_CBAJ_T0039362.1 MGP_CBAJ_G0021129.1 mouse_genomes_project 14 57718734 57727230 + MGP_CBAJ_P0039362 Rcbtb1 protein_coding protein_coding MGP_CBAJ_T0039363.1 MGP_CBAJ_G0021129.1 mouse_genomes_project 14 57718741 57746237 + Rcbtb1 protein_coding processed_transcript MGP_CBAJ_T0039364.1 MGP_CBAJ_G0021129.1 mouse_genomes_project 14 57718761 57727326 + MGP_CBAJ_P0039364 Rcbtb1 protein_coding protein_coding MGP_CBAJ_T0039365.1 MGP_CBAJ_G0021129.1 mouse_genomes_project 14 57722871 57753674 + MGP_CBAJ_P0039365 Rcbtb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039366.1 MGP_CBAJ_G0021129.1 mouse_genomes_project 14 57740071 57748434 + Rcbtb1 protein_coding processed_transcript MGP_CBAJ_T0039367.1 MGP_CBAJ_G0021129.1 mouse_genomes_project 14 57741315 57763987 + MGP_CBAJ_P0039367 Rcbtb1 protein_coding protein_coding MGP_CBAJ_T0039368.1 MGP_CBAJ_G0021129.1 mouse_genomes_project 14 57746298 57748395 + Rcbtb1 protein_coding retained_intron MGP_CBAJ_T0006597.1 MGP_CBAJ_G0005448.1 mouse_genomes_project 14 48139787 48146744 + Gm26782 lincRNA lincRNA MGP_CBAJ_T0006598.1 MGP_CBAJ_G0005448.1 mouse_genomes_project 14 48139799 48149788 + Gm26782 lincRNA lincRNA MGP_CBAJ_T0038802.1 MGP_CBAJ_G0020957.1 mouse_genomes_project 14 47846223 47847328 + MGP_CBAJ_P0038802 Olfr744 protein_coding protein_coding MGP_CBAJ_T0039941.1 MGP_CBAJ_G0021345.1 mouse_genomes_project 14 108884800 108929828 - MGP_CBAJ_P0039941 Rnf219 protein_coding protein_coding MGP_CBAJ_T0039462.1 MGP_CBAJ_G0021170.1 mouse_genomes_project 14 62521490 62555492 + MGP_CBAJ_P0039462 Fam167a protein_coding protein_coding MGP_CBAJ_T0039463.1 MGP_CBAJ_G0021170.1 mouse_genomes_project 14 62521505 62529511 + Fam167a protein_coding retained_intron MGP_CBAJ_T0101632.1 MGP_CBAJ_G0039663.1 mouse_genomes_project 14 12720835 12725144 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0002581.1 MGP_CBAJ_G0002474.1 mouse_genomes_project 14 50803953 50804481 + MGP_CBAJ_P0002581 TR_V_gene TR_V_gene MGP_CBAJ_T0003497.1 MGP_CBAJ_G0003179.1 mouse_genomes_project 14 69063795 69087571 + Gm27175 antisense antisense MGP_CBAJ_T0040027.1 MGP_CBAJ_G0021386.1 mouse_genomes_project 14 129822049 129875903 + Pcca protein_coding retained_intron MGP_CBAJ_T0040028.1 MGP_CBAJ_G0021386.1 mouse_genomes_project 14 129822056 129922181 + MGP_CBAJ_P0040028 Pcca protein_coding protein_coding MGP_CBAJ_T0040029.1 MGP_CBAJ_G0021386.1 mouse_genomes_project 14 129822064 130221021 + MGP_CBAJ_P0040029 Pcca protein_coding protein_coding MGP_CBAJ_T0040030.1 MGP_CBAJ_G0021386.1 mouse_genomes_project 14 129822070 129962342 + MGP_CBAJ_P0040030 Pcca protein_coding protein_coding MGP_CBAJ_T0040031.1 MGP_CBAJ_G0021386.1 mouse_genomes_project 14 129875609 130220905 + MGP_CBAJ_P0040031 Pcca protein_coding nonsense_mediated_decay MGP_CBAJ_T0040032.1 MGP_CBAJ_G0021386.1 mouse_genomes_project 14 129905287 129975835 + Pcca protein_coding processed_transcript MGP_CBAJ_T0040033.1 MGP_CBAJ_G0021386.1 mouse_genomes_project 14 130031609 130053724 + MGP_CBAJ_P0040033 Pcca protein_coding nonsense_mediated_decay MGP_CBAJ_T0040034.1 MGP_CBAJ_G0021386.1 mouse_genomes_project 14 130031635 130220902 + MGP_CBAJ_P0040034 Pcca protein_coding nonsense_mediated_decay MGP_CBAJ_T0040035.1 MGP_CBAJ_G0021386.1 mouse_genomes_project 14 130031699 130126835 + Pcca protein_coding processed_transcript MGP_CBAJ_T0040036.1 MGP_CBAJ_G0021386.1 mouse_genomes_project 14 130053628 130127181 + Pcca protein_coding retained_intron MGP_CBAJ_T0040037.1 MGP_CBAJ_G0021386.1 mouse_genomes_project 14 130103359 130220897 + MGP_CBAJ_P0040037 Pcca protein_coding protein_coding MGP_CBAJ_T0040039.1 MGP_CBAJ_G0021386.1 mouse_genomes_project 14 130207011 130222177 + Pcca protein_coding processed_transcript MGP_CBAJ_T0040040.1 MGP_CBAJ_G0021386.1 mouse_genomes_project 14 130217979 130220905 + Pcca protein_coding retained_intron MGP_CBAJ_T0100112.1 MGP_CBAJ_G0038367.1 mouse_genomes_project 14 63965833 63965969 + Gm26225 snoRNA snoRNA MGP_CBAJ_T0038155.1 MGP_CBAJ_G0020763.1 mouse_genomes_project 14 18467252 18599702 - MGP_CBAJ_P0038155 Dlg5 protein_coding protein_coding MGP_CBAJ_T0038156.1 MGP_CBAJ_G0020763.1 mouse_genomes_project 14 18467252 18516273 - MGP_CBAJ_P0038156 Dlg5 protein_coding protein_coding MGP_CBAJ_T0038157.1 MGP_CBAJ_G0020763.1 mouse_genomes_project 14 18467252 18479488 - MGP_CBAJ_P0038157 Dlg5 protein_coding protein_coding MGP_CBAJ_T0038158.1 MGP_CBAJ_G0020763.1 mouse_genomes_project 14 18467254 18599702 - MGP_CBAJ_P0038158 Dlg5 protein_coding protein_coding MGP_CBAJ_T0038159.1 MGP_CBAJ_G0020763.1 mouse_genomes_project 14 18477683 18486423 - MGP_CBAJ_P0038159 Dlg5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038160.1 MGP_CBAJ_G0020763.1 mouse_genomes_project 14 18479580 18482064 - Dlg5 protein_coding retained_intron MGP_CBAJ_T0038161.1 MGP_CBAJ_G0020763.1 mouse_genomes_project 14 18490184 18493136 - Dlg5 protein_coding retained_intron MGP_CBAJ_T0038162.1 MGP_CBAJ_G0020763.1 mouse_genomes_project 14 18534565 18598647 - MGP_CBAJ_P0038162 Dlg5 protein_coding protein_coding MGP_CBAJ_T0039746.1 MGP_CBAJ_G0021273.1 mouse_genomes_project 14 74903014 74921420 + MGP_CBAJ_P0039746 Esd protein_coding protein_coding MGP_CBAJ_T0039747.1 MGP_CBAJ_G0021273.1 mouse_genomes_project 14 74903036 74913320 + Esd protein_coding retained_intron MGP_CBAJ_T0039748.1 MGP_CBAJ_G0021273.1 mouse_genomes_project 14 74903038 74910172 + Esd protein_coding processed_transcript MGP_CBAJ_T0039749.1 MGP_CBAJ_G0021273.1 mouse_genomes_project 14 74903074 74916259 + MGP_CBAJ_P0039749 Esd protein_coding protein_coding MGP_CBAJ_T0039750.1 MGP_CBAJ_G0021273.1 mouse_genomes_project 14 74903101 74920503 + MGP_CBAJ_P0039750 Esd protein_coding protein_coding MGP_CBAJ_T0039751.1 MGP_CBAJ_G0021273.1 mouse_genomes_project 14 74909159 74914269 + Esd protein_coding retained_intron MGP_CBAJ_T0039752.1 MGP_CBAJ_G0021273.1 mouse_genomes_project 14 74909222 74920410 + MGP_CBAJ_P0039752 Esd protein_coding protein_coding MGP_CBAJ_T0039955.1 MGP_CBAJ_G0021350.1 mouse_genomes_project 14 110654942 110658017 + MGP_CBAJ_P0039955 Trim52 protein_coding protein_coding MGP_CBAJ_T0039956.1 MGP_CBAJ_G0021350.1 mouse_genomes_project 14 110654943 110683160 + Trim52 protein_coding processed_transcript MGP_CBAJ_T0002462.1 MGP_CBAJ_G0002371.1 mouse_genomes_project 14 52012775 52012826 + MGP_CBAJ_P0002462 Trdj1 TR_J_gene TR_J_gene MGP_CBAJ_T0009851.1 MGP_CBAJ_G0007989.1 mouse_genomes_project 14 18417765 18417819 + Mir7210 miRNA miRNA MGP_CBAJ_T0038350.1 MGP_CBAJ_G0020817.1 mouse_genomes_project 14 26095344 26109737 + MGP_CBAJ_P0038350 Glt8d1 protein_coding protein_coding MGP_CBAJ_T0038351.1 MGP_CBAJ_G0020817.1 mouse_genomes_project 14 26095384 26109737 + MGP_CBAJ_P0038351 Glt8d1 protein_coding protein_coding MGP_CBAJ_T0002516.1 MGP_CBAJ_G0002421.1 mouse_genomes_project 14 52104231 52104294 + MGP_CBAJ_P0002516 Traj4 TR_J_gene TR_J_gene MGP_CBAJ_T0038118.1 MGP_CBAJ_G0020757.1 mouse_genomes_project 14 15848024 15895231 + MGP_CBAJ_P0038118 Samd8 protein_coding protein_coding MGP_CBAJ_T0038119.1 MGP_CBAJ_G0020757.1 mouse_genomes_project 14 15848041 15895231 + MGP_CBAJ_P0038119 Samd8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038120.1 MGP_CBAJ_G0020757.1 mouse_genomes_project 14 15848294 15895169 + MGP_CBAJ_P0038120 Samd8 protein_coding unknown_likely_coding MGP_CBAJ_T0038121.1 MGP_CBAJ_G0020757.1 mouse_genomes_project 14 15849045 15903133 + MGP_CBAJ_P0038121 Samd8 protein_coding protein_coding MGP_CBAJ_T0038122.1 MGP_CBAJ_G0020757.1 mouse_genomes_project 14 15893794 15894903 + Samd8 protein_coding retained_intron MGP_CBAJ_T0098851.1 MGP_CBAJ_G0037106.1 mouse_genomes_project 14 62126201 62126288 + Gm23629 snRNA snRNA MGP_CBAJ_T0100103.1 MGP_CBAJ_G0038358.1 mouse_genomes_project 14 49820426 49820516 + Gm23758 snoRNA snoRNA MGP_CBAJ_T0040021.1 MGP_CBAJ_G0021382.1 mouse_genomes_project 14 129709304 129731395 - MGP_CBAJ_P0040021 Gm5089 protein_coding protein_coding MGP_CBAJ_T0011249.1 MGP_CBAJ_G0009387.1 mouse_genomes_project 14 60440121 60440235 + Gm27845 misc_RNA misc_RNA MGP_CBAJ_T0002601.1 MGP_CBAJ_G0002491.1 mouse_genomes_project 14 51698482 51699076 + MGP_CBAJ_P0002601 Trav19 TR_V_gene TR_V_gene MGP_CBAJ_T0017121.1 MGP_CBAJ_G0015007.1 mouse_genomes_project 14 13313649 13316339 + processed_transcript processed_transcript MGP_CBAJ_T0097951.1 MGP_CBAJ_G0036224.1 mouse_genomes_project 14 73995621 73995727 - Gm22164 rRNA rRNA MGP_CBAJ_T0003486.1 MGP_CBAJ_G0003170.1 mouse_genomes_project 14 59489083 59497224 - Mipepos antisense antisense MGP_CBAJ_T0038780.1 MGP_CBAJ_G0020938.1 mouse_genomes_project 14 47042643 47051524 - MGP_CBAJ_P0038780 protein_coding protein_coding MGP_CBAJ_T0039099.1 MGP_CBAJ_G0021043.1 mouse_genomes_project 14 52949118 52951695 + MGP_CBAJ_P0039099 Cmtm5 protein_coding protein_coding MGP_CBAJ_T0038840.1 MGP_CBAJ_G0020974.1 mouse_genomes_project 14 48314207 48314920 - MGP_CBAJ_P0038840 Rnase11 protein_coding protein_coding MGP_CBAJ_T0009862.1 MGP_CBAJ_G0008000.1 mouse_genomes_project 14 46680967 46681072 - Gm22949 miRNA miRNA MGP_CBAJ_T0037913.1 MGP_CBAJ_G0020693.1 mouse_genomes_project 14 669876 683419 - MGP_CBAJ_P0037913 Fam107a protein_coding protein_coding MGP_CBAJ_T0037914.1 MGP_CBAJ_G0020693.1 mouse_genomes_project 14 669876 683421 - MGP_CBAJ_P0037914 Fam107a protein_coding protein_coding MGP_CBAJ_T0037915.1 MGP_CBAJ_G0020693.1 mouse_genomes_project 14 671170 694358 - MGP_CBAJ_P0037915 Fam107a protein_coding protein_coding MGP_CBAJ_T0037916.1 MGP_CBAJ_G0020693.1 mouse_genomes_project 14 673155 683437 - MGP_CBAJ_P0037916 Fam107a protein_coding protein_coding MGP_CBAJ_T0038182.1 MGP_CBAJ_G0020769.1 mouse_genomes_project 14 20165107 20219391 - MGP_CBAJ_P0038182 Zcchc24 protein_coding protein_coding MGP_CBAJ_T0038183.1 MGP_CBAJ_G0020769.1 mouse_genomes_project 14 20165109 20173259 - Zcchc24 protein_coding retained_intron MGP_CBAJ_T0039982.1 MGP_CBAJ_G0021366.1 mouse_genomes_project 14 125753140 125778950 - Uggt2 protein_coding retained_intron MGP_CBAJ_T0039983.1 MGP_CBAJ_G0021366.1 mouse_genomes_project 14 125753140 125895234 - MGP_CBAJ_P0039983 Uggt2 protein_coding protein_coding MGP_CBAJ_T0039984.1 MGP_CBAJ_G0021366.1 mouse_genomes_project 14 125754293 125778710 - Uggt2 protein_coding retained_intron MGP_CBAJ_T0039985.1 MGP_CBAJ_G0021366.1 mouse_genomes_project 14 125754518 125778231 - Uggt2 protein_coding processed_transcript MGP_CBAJ_T0039986.1 MGP_CBAJ_G0021366.1 mouse_genomes_project 14 125754915 125778884 - Uggt2 protein_coding retained_intron MGP_CBAJ_T0039987.1 MGP_CBAJ_G0021366.1 mouse_genomes_project 14 125766651 125780548 - Uggt2 protein_coding processed_transcript MGP_CBAJ_T0039988.1 MGP_CBAJ_G0021366.1 mouse_genomes_project 14 125770312 125779656 - Uggt2 protein_coding retained_intron MGP_CBAJ_T0039989.1 MGP_CBAJ_G0021366.1 mouse_genomes_project 14 125770478 125779043 - Uggt2 protein_coding processed_transcript MGP_CBAJ_T0039990.1 MGP_CBAJ_G0021366.1 mouse_genomes_project 14 125771428 125790018 - MGP_CBAJ_P0039990 Uggt2 protein_coding protein_coding MGP_CBAJ_T0039991.1 MGP_CBAJ_G0021366.1 mouse_genomes_project 14 125785895 125847048 - MGP_CBAJ_P0039991 Uggt2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039992.1 MGP_CBAJ_G0021366.1 mouse_genomes_project 14 125785895 125817050 - MGP_CBAJ_P0039992 Uggt2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039993.1 MGP_CBAJ_G0021366.1 mouse_genomes_project 14 125817177 125824884 - Uggt2 protein_coding retained_intron MGP_CBAJ_T0039994.1 MGP_CBAJ_G0021366.1 mouse_genomes_project 14 125833074 125838533 - Uggt2 protein_coding retained_intron MGP_CBAJ_T0039995.1 MGP_CBAJ_G0021366.1 mouse_genomes_project 14 125847975 125895234 - Uggt2 protein_coding retained_intron MGP_CBAJ_T0037918.1 MGP_CBAJ_G0020695.1 mouse_genomes_project 14 823270 1081479 - MGP_CBAJ_P0037918 4930452B06Rik protein_coding protein_coding MGP_CBAJ_T0039769.1 MGP_CBAJ_G0021279.1 mouse_genomes_project 14 75511325 75587829 + MGP_CBAJ_P0039769 Zc3h13 protein_coding unknown_likely_coding MGP_CBAJ_T0039770.1 MGP_CBAJ_G0021279.1 mouse_genomes_project 14 75511400 75587821 + MGP_CBAJ_P0039770 Zc3h13 protein_coding protein_coding MGP_CBAJ_T0098860.1 MGP_CBAJ_G0037115.1 mouse_genomes_project 14 99889585 99889701 + Gm24043 snRNA snRNA MGP_CBAJ_T0038997.1 MGP_CBAJ_G0021014.1 mouse_genomes_project 14 52145146 52159962 + MGP_CBAJ_P0038997 Abhd4 protein_coding protein_coding MGP_CBAJ_T0038998.1 MGP_CBAJ_G0021014.1 mouse_genomes_project 14 52150227 52160056 + MGP_CBAJ_P0038998 Abhd4 protein_coding protein_coding MGP_CBAJ_T0038999.1 MGP_CBAJ_G0021014.1 mouse_genomes_project 14 52150242 52154130 + Abhd4 protein_coding retained_intron MGP_CBAJ_T0039000.1 MGP_CBAJ_G0021014.1 mouse_genomes_project 14 52150248 52154289 + MGP_CBAJ_P0039000 Abhd4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039001.1 MGP_CBAJ_G0021014.1 mouse_genomes_project 14 52150276 52154292 + MGP_CBAJ_P0039001 Abhd4 protein_coding protein_coding MGP_CBAJ_T0039002.1 MGP_CBAJ_G0021014.1 mouse_genomes_project 14 52153944 52162142 + MGP_CBAJ_P0039002 Abhd4 protein_coding protein_coding MGP_CBAJ_T0039003.1 MGP_CBAJ_G0021014.1 mouse_genomes_project 14 52154249 52158741 + MGP_CBAJ_P0039003 Abhd4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038456.1 MGP_CBAJ_G0020836.1 mouse_genomes_project 14 26852866 26936613 - MGP_CBAJ_P0038456 Ankrd28 protein_coding unknown_likely_coding MGP_CBAJ_T0038457.1 MGP_CBAJ_G0020836.1 mouse_genomes_project 14 26854117 26986909 - MGP_CBAJ_P0038457 Ankrd28 protein_coding protein_coding MGP_CBAJ_T0039820.1 MGP_CBAJ_G0021301.1 mouse_genomes_project 14 79213217 79424205 - MGP_CBAJ_P0039820 Dgkh protein_coding protein_coding MGP_CBAJ_T0039882.1 MGP_CBAJ_G0021331.1 mouse_genomes_project 14 105567065 105732230 - MGP_CBAJ_P0039882 Tbc1d4 protein_coding unknown_likely_coding MGP_CBAJ_T0039883.1 MGP_CBAJ_G0021331.1 mouse_genomes_project 14 105567067 105732962 - MGP_CBAJ_P0039883 Tbc1d4 protein_coding protein_coding MGP_CBAJ_T0039884.1 MGP_CBAJ_G0021331.1 mouse_genomes_project 14 105567075 105589272 - Tbc1d4 protein_coding retained_intron MGP_CBAJ_T0039885.1 MGP_CBAJ_G0021331.1 mouse_genomes_project 14 105567075 105632652 - MGP_CBAJ_P0039885 Tbc1d4 protein_coding protein_coding MGP_CBAJ_T0039886.1 MGP_CBAJ_G0021331.1 mouse_genomes_project 14 105568430 105732415 - MGP_CBAJ_P0039886 Tbc1d4 protein_coding protein_coding MGP_CBAJ_T0039887.1 MGP_CBAJ_G0021331.1 mouse_genomes_project 14 105588620 105732761 - Tbc1d4 protein_coding retained_intron MGP_CBAJ_T0039888.1 MGP_CBAJ_G0021331.1 mouse_genomes_project 14 105588842 105732596 - Tbc1d4 protein_coding retained_intron MGP_CBAJ_T0039889.1 MGP_CBAJ_G0021331.1 mouse_genomes_project 14 105588842 105732596 - Tbc1d4 protein_coding retained_intron MGP_CBAJ_T0039890.1 MGP_CBAJ_G0021331.1 mouse_genomes_project 14 105589011 105626435 - MGP_CBAJ_P0039890 Tbc1d4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039891.1 MGP_CBAJ_G0021331.1 mouse_genomes_project 14 105589022 105733120 - MGP_CBAJ_P0039891 Tbc1d4 protein_coding protein_coding MGP_CBAJ_T0039892.1 MGP_CBAJ_G0021331.1 mouse_genomes_project 14 105630032 105632596 - Tbc1d4 protein_coding retained_intron MGP_CBAJ_T0100090.1 MGP_CBAJ_G0038345.1 mouse_genomes_project 14 21109955 21110086 + Gm24031 snoRNA snoRNA MGP_CBAJ_T0038414.1 MGP_CBAJ_G0020825.1 mouse_genomes_project 14 26334275 26346615 + MGP_CBAJ_P0038414 Sema3g protein_coding protein_coding MGP_CBAJ_T0038374.1 MGP_CBAJ_G0020821.1 mouse_genomes_project 14 26247632 26253905 + MGP_CBAJ_P0038374 Nt5dc2 protein_coding protein_coding MGP_CBAJ_T0039448.1 MGP_CBAJ_G0021164.1 mouse_genomes_project 14 62060579 62062203 + MGP_CBAJ_P0039448 Defb42 protein_coding protein_coding MGP_CBAJ_T0039449.1 MGP_CBAJ_G0021164.1 mouse_genomes_project 14 62060617 62074584 + Defb42 protein_coding processed_transcript MGP_CBAJ_T0039450.1 MGP_CBAJ_G0021164.1 mouse_genomes_project 14 62060682 62062151 + MGP_CBAJ_P0039450 Defb42 protein_coding protein_coding MGP_CBAJ_T0039451.1 MGP_CBAJ_G0021164.1 mouse_genomes_project 14 62061821 62062168 + MGP_CBAJ_P0039451 Defb42 protein_coding protein_coding MGP_CBAJ_T0039452.1 MGP_CBAJ_G0021164.1 mouse_genomes_project 14 62071512 62073375 + Defb42 protein_coding processed_transcript MGP_CBAJ_T0038812.1 MGP_CBAJ_G0020966.1 mouse_genomes_project 14 48157906 48159773 - MGP_CBAJ_P0038812 Klhl33 protein_coding protein_coding MGP_CBAJ_T0012830.1 MGP_CBAJ_G0010942.1 mouse_genomes_project 14 41798102 41799012 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0039340.1 MGP_CBAJ_G0021121.1 mouse_genomes_project 14 56195091 56201892 + MGP_CBAJ_P0039340 Sap18 protein_coding protein_coding MGP_CBAJ_T0039341.1 MGP_CBAJ_G0021121.1 mouse_genomes_project 14 56195129 56201881 + MGP_CBAJ_P0039341 Sap18 protein_coding protein_coding MGP_CBAJ_T0039342.1 MGP_CBAJ_G0021121.1 mouse_genomes_project 14 56195132 56198990 + MGP_CBAJ_P0039342 Sap18 protein_coding protein_coding MGP_CBAJ_T0039343.1 MGP_CBAJ_G0021121.1 mouse_genomes_project 14 56195175 56195761 + Sap18 protein_coding retained_intron MGP_CBAJ_T0037990.1 MGP_CBAJ_G0020721.1 mouse_genomes_project 14 11746435 11749764 - MGP_CBAJ_P0037990 Rpl15 protein_coding protein_coding MGP_CBAJ_T0037991.1 MGP_CBAJ_G0020721.1 mouse_genomes_project 14 11748003 11750088 - MGP_CBAJ_P0037991 Rpl15 protein_coding protein_coding MGP_CBAJ_T0002536.1 MGP_CBAJ_G0002439.1 mouse_genomes_project 14 52046100 52046163 + TR_J_pseudogene TR_J_pseudogene MGP_CBAJ_T0012857.1 MGP_CBAJ_G0010969.1 mouse_genomes_project 14 62513825 62514823 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0038030.1 MGP_CBAJ_G0020733.1 mouse_genomes_project 14 14247997 14289492 - MGP_CBAJ_P0038030 Ecd protein_coding protein_coding MGP_CBAJ_T0038652.1 MGP_CBAJ_G0020908.1 mouse_genomes_project 14 42008498 42020542 - MGP_CBAJ_P0038652 Gnpnat1 protein_coding protein_coding MGP_CBAJ_T0039509.1 MGP_CBAJ_G0021191.1 mouse_genomes_project 14 64893110 64952000 + MGP_CBAJ_P0039509 Nuggc protein_coding protein_coding MGP_CBAJ_T0039510.1 MGP_CBAJ_G0021191.1 mouse_genomes_project 14 64903937 64951913 + MGP_CBAJ_P0039510 Nuggc protein_coding protein_coding MGP_CBAJ_T0002658.1 MGP_CBAJ_G0002538.1 mouse_genomes_project 14 51586622 51586884 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0003496.1 MGP_CBAJ_G0003178.1 mouse_genomes_project 14 69038246 69041138 + Gm27222 antisense antisense MGP_CBAJ_T0039440.1 MGP_CBAJ_G0021159.1 mouse_genomes_project 14 61786831 61934017 + MGP_CBAJ_P0039440 Wdfy2 protein_coding protein_coding MGP_CBAJ_T0038570.1 MGP_CBAJ_G0020876.1 mouse_genomes_project 14 29843097 29876887 + MGP_CBAJ_P0038570 Mmrn2 protein_coding protein_coding MGP_CBAJ_T0039307.1 MGP_CBAJ_G0021112.1 mouse_genomes_project 14 55381130 55390820 - MGP_CBAJ_P0039307 Gjb2 protein_coding protein_coding MGP_CBAJ_T0006587.1 MGP_CBAJ_G0005441.1 mouse_genomes_project 14 42654101 42684822 + lincRNA lincRNA MGP_CBAJ_T0038671.1 MGP_CBAJ_G0020912.1 mouse_genomes_project 14 43114255 43125101 - MGP_CBAJ_P0038671 Bmp4 protein_coding protein_coding MGP_CBAJ_T0038672.1 MGP_CBAJ_G0020912.1 mouse_genomes_project 14 43114441 43124982 - MGP_CBAJ_P0038672 Bmp4 protein_coding protein_coding MGP_CBAJ_T0038673.1 MGP_CBAJ_G0020912.1 mouse_genomes_project 14 43119992 43124967 - Bmp4 protein_coding retained_intron MGP_CBAJ_T0101651.1 MGP_CBAJ_G0039682.1 mouse_genomes_project 14 132059347 132059632 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0039286.1 MGP_CBAJ_G0021100.1 mouse_genomes_project 14 54374198 54379526 - MGP_CBAJ_P0039286 Gzmc protein_coding protein_coding MGP_CBAJ_T0038605.1 MGP_CBAJ_G0020886.1 mouse_genomes_project 14 32831216 32843240 + MGP_CBAJ_P0038605 Lrit1 protein_coding protein_coding MGP_CBAJ_T0039629.1 MGP_CBAJ_G0021235.1 mouse_genomes_project 14 69384775 69405334 - MGP_CBAJ_P0039629 Rhobtb2 protein_coding protein_coding MGP_CBAJ_T0039618.1 MGP_CBAJ_G0021231.1 mouse_genomes_project 14 69185906 69280777 + MGP_CBAJ_P0039618 Loxl2 protein_coding protein_coding MGP_CBAJ_T0039619.1 MGP_CBAJ_G0021231.1 mouse_genomes_project 14 69186316 69278474 + MGP_CBAJ_P0039619 Loxl2 protein_coding protein_coding MGP_CBAJ_T0038308.1 MGP_CBAJ_G0020808.1 mouse_genomes_project 14 25690059 25731310 + MGP_CBAJ_P0038308 Rft1 protein_coding protein_coding MGP_CBAJ_T0038309.1 MGP_CBAJ_G0020808.1 mouse_genomes_project 14 25690074 25697063 + Rft1 protein_coding processed_transcript MGP_CBAJ_T0038310.1 MGP_CBAJ_G0020808.1 mouse_genomes_project 14 25690082 25701768 + Rft1 protein_coding processed_transcript MGP_CBAJ_T0038311.1 MGP_CBAJ_G0020808.1 mouse_genomes_project 14 25690086 25702951 + Rft1 protein_coding retained_intron MGP_CBAJ_T0038312.1 MGP_CBAJ_G0020808.1 mouse_genomes_project 14 25690106 25731310 + MGP_CBAJ_P0038312 Rft1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038313.1 MGP_CBAJ_G0020808.1 mouse_genomes_project 14 25690106 25731310 + MGP_CBAJ_P0038313 Rft1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038314.1 MGP_CBAJ_G0020808.1 mouse_genomes_project 14 25720688 25729947 + Rft1 protein_coding processed_transcript MGP_CBAJ_T0098834.1 MGP_CBAJ_G0037089.1 mouse_genomes_project 14 36163137 36163301 + Gm25012 snRNA snRNA MGP_CBAJ_T0038189.1 MGP_CBAJ_G0020772.1 mouse_genomes_project 14 20351963 20367149 - MGP_CBAJ_P0038189 Plac9b protein_coding protein_coding MGP_CBAJ_T0038193.1 MGP_CBAJ_G0020772.1 mouse_genomes_project 14 20352436 20366525 - MGP_CBAJ_P0038193 Plac9b protein_coding protein_coding MGP_CBAJ_T0003509.1 MGP_CBAJ_G0003186.1 mouse_genomes_project 14 107990339 107996799 - Slain1os antisense antisense MGP_CBAJ_T0012838.1 MGP_CBAJ_G0010950.1 mouse_genomes_project 14 49926212 49926979 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0039379.1 MGP_CBAJ_G0021134.1 mouse_genomes_project 14 58006244 58136706 + MGP_CBAJ_P0039379 Cab39l protein_coding protein_coding MGP_CBAJ_T0100133.1 MGP_CBAJ_G0038388.1 mouse_genomes_project 14 105401257 105401393 + Gm26173 snoRNA snoRNA MGP_CBAJ_T0100129.1 MGP_CBAJ_G0038384.1 mouse_genomes_project 14 100924342 100924480 - Gm23276 snoRNA snoRNA MGP_CBAJ_T0038467.1 MGP_CBAJ_G0020839.1 mouse_genomes_project 14 27302200 27314596 + MGP_CBAJ_P0038467 Oxnad1 protein_coding protein_coding MGP_CBAJ_T0038468.1 MGP_CBAJ_G0020839.1 mouse_genomes_project 14 27302202 27319464 + MGP_CBAJ_P0038468 Oxnad1 protein_coding protein_coding MGP_CBAJ_T0038469.1 MGP_CBAJ_G0020839.1 mouse_genomes_project 14 27302239 27326122 + MGP_CBAJ_P0038469 Oxnad1 protein_coding protein_coding MGP_CBAJ_T0038470.1 MGP_CBAJ_G0020839.1 mouse_genomes_project 14 27302613 27322551 + MGP_CBAJ_P0038470 Oxnad1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038471.1 MGP_CBAJ_G0020839.1 mouse_genomes_project 14 27302637 27326122 + MGP_CBAJ_P0038471 Oxnad1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038472.1 MGP_CBAJ_G0020839.1 mouse_genomes_project 14 27302652 27322420 + MGP_CBAJ_P0038472 Oxnad1 protein_coding protein_coding MGP_CBAJ_T0038473.1 MGP_CBAJ_G0020839.1 mouse_genomes_project 14 27302660 27322962 + Oxnad1 protein_coding retained_intron MGP_CBAJ_T0038474.1 MGP_CBAJ_G0020839.1 mouse_genomes_project 14 27302660 27319544 + MGP_CBAJ_P0038474 Oxnad1 protein_coding protein_coding MGP_CBAJ_T0038475.1 MGP_CBAJ_G0020839.1 mouse_genomes_project 14 27302703 27319504 + MGP_CBAJ_P0038475 Oxnad1 protein_coding protein_coding MGP_CBAJ_T0038476.1 MGP_CBAJ_G0020839.1 mouse_genomes_project 14 27318318 27325575 + MGP_CBAJ_P0038476 Oxnad1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038477.1 MGP_CBAJ_G0020839.1 mouse_genomes_project 14 27318381 27325772 + MGP_CBAJ_P0038477 Oxnad1 protein_coding protein_coding MGP_CBAJ_T0038478.1 MGP_CBAJ_G0020839.1 mouse_genomes_project 14 27323737 27325202 + Oxnad1 protein_coding retained_intron MGP_CBAJ_T0040026.1 MGP_CBAJ_G0021385.1 mouse_genomes_project 14 129784554 129786090 + MGP_CBAJ_P0040026 Gm10837 protein_coding protein_coding MGP_CBAJ_T0038322.1 MGP_CBAJ_G0020810.1 mouse_genomes_project 14 25878658 25935711 + MGP_CBAJ_P0038322 Tmem110 protein_coding protein_coding MGP_CBAJ_T0038323.1 MGP_CBAJ_G0020810.1 mouse_genomes_project 14 25878662 25933295 + MGP_CBAJ_P0038323 Tmem110 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038324.1 MGP_CBAJ_G0020810.1 mouse_genomes_project 14 25925165 25933689 + Tmem110 protein_coding processed_transcript MGP_CBAJ_T0038325.1 MGP_CBAJ_G0020810.1 mouse_genomes_project 14 25929231 25931277 + Tmem110 protein_coding retained_intron MGP_CBAJ_T0038326.1 MGP_CBAJ_G0020810.1 mouse_genomes_project 14 25931079 25933725 + Tmem110 protein_coding retained_intron MGP_CBAJ_T0038288.1 MGP_CBAJ_G0020804.1 mouse_genomes_project 14 24988757 25348005 - MGP_CBAJ_P0038288 Cacna1d protein_coding protein_coding MGP_CBAJ_T0038289.1 MGP_CBAJ_G0020804.1 mouse_genomes_project 14 24988757 25504140 - MGP_CBAJ_P0038289 Cacna1d protein_coding protein_coding MGP_CBAJ_T0038290.1 MGP_CBAJ_G0020804.1 mouse_genomes_project 14 25015675 25190469 - MGP_CBAJ_P0038290 Cacna1d protein_coding unknown_likely_coding MGP_CBAJ_T0003484.1 MGP_CBAJ_G0003168.1 mouse_genomes_project 14 55032982 55039421 + antisense antisense MGP_CBAJ_T0097948.1 MGP_CBAJ_G0036221.1 mouse_genomes_project 14 32606629 32606745 - n-R5s46 rRNA rRNA MGP_CBAJ_T0038428.1 MGP_CBAJ_G0020830.1 mouse_genomes_project 14 26479796 26561291 - MGP_CBAJ_P0038428 Sh3bp5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038429.1 MGP_CBAJ_G0020830.1 mouse_genomes_project 14 26493695 26537584 - MGP_CBAJ_P0038429 Sh3bp5 protein_coding protein_coding MGP_CBAJ_T0038430.1 MGP_CBAJ_G0020830.1 mouse_genomes_project 14 26493695 26561278 - MGP_CBAJ_P0038430 Sh3bp5 protein_coding protein_coding MGP_CBAJ_T0038431.1 MGP_CBAJ_G0020830.1 mouse_genomes_project 14 26497505 26527292 - Sh3bp5 protein_coding processed_transcript MGP_CBAJ_T0012832.1 MGP_CBAJ_G0010944.1 mouse_genomes_project 14 42539705 42540135 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0038798.1 MGP_CBAJ_G0020953.1 mouse_genomes_project 14 47614251 47615294 + MGP_CBAJ_P0038798 protein_coding protein_coding MGP_CBAJ_T0002467.1 MGP_CBAJ_G0002375.1 mouse_genomes_project 14 52043177 52043242 + Traj57 TR_J_gene processed_transcript MGP_CBAJ_T0002468.1 MGP_CBAJ_G0002375.1 mouse_genomes_project 14 52043179 52043242 + MGP_CBAJ_P0002468 Traj57 TR_J_gene TR_J_gene MGP_CBAJ_T0038066.1 MGP_CBAJ_G0020744.1 mouse_genomes_project 14 14651233 14671783 + MGP_CBAJ_P0038066 Sec24c protein_coding protein_coding MGP_CBAJ_T0038067.1 MGP_CBAJ_G0020744.1 mouse_genomes_project 14 14651245 14671790 + MGP_CBAJ_P0038067 Sec24c protein_coding unknown_likely_coding MGP_CBAJ_T0006632.1 MGP_CBAJ_G0005474.1 mouse_genomes_project 14 107190816 107195123 + Gm26778 lincRNA lincRNA MGP_CBAJ_T0039537.1 MGP_CBAJ_G0021202.1 mouse_genomes_project 14 65544529 65618794 - MGP_CBAJ_P0039537 Ptk2b protein_coding unknown_likely_coding MGP_CBAJ_T0039538.1 MGP_CBAJ_G0021202.1 mouse_genomes_project 14 65544531 65563753 - MGP_CBAJ_P0039538 Ptk2b protein_coding protein_coding MGP_CBAJ_T0039539.1 MGP_CBAJ_G0021202.1 mouse_genomes_project 14 65544531 65697236 - MGP_CBAJ_P0039539 Ptk2b protein_coding protein_coding MGP_CBAJ_T0039540.1 MGP_CBAJ_G0021202.1 mouse_genomes_project 14 65544536 65554243 - Ptk2b protein_coding retained_intron MGP_CBAJ_T0039541.1 MGP_CBAJ_G0021202.1 mouse_genomes_project 14 65545113 65697166 - MGP_CBAJ_P0039541 Ptk2b protein_coding protein_coding MGP_CBAJ_T0039542.1 MGP_CBAJ_G0021202.1 mouse_genomes_project 14 65547539 65557467 - Ptk2b protein_coding retained_intron MGP_CBAJ_T0039543.1 MGP_CBAJ_G0021202.1 mouse_genomes_project 14 65566196 65697176 - Ptk2b protein_coding retained_intron MGP_CBAJ_T0039172.1 MGP_CBAJ_G0021061.1 mouse_genomes_project 14 53662977 53666201 + MGP_CBAJ_P0039172 Psme1 protein_coding protein_coding MGP_CBAJ_T0039173.1 MGP_CBAJ_G0021061.1 mouse_genomes_project 14 53663214 53666383 + MGP_CBAJ_P0039173 Psme1 protein_coding protein_coding MGP_CBAJ_T0039174.1 MGP_CBAJ_G0021061.1 mouse_genomes_project 14 53663259 53665497 + Psme1 protein_coding retained_intron MGP_CBAJ_T0039175.1 MGP_CBAJ_G0021061.1 mouse_genomes_project 14 53663310 53666383 + Psme1 protein_coding retained_intron MGP_CBAJ_T0039176.1 MGP_CBAJ_G0021061.1 mouse_genomes_project 14 53663322 53666229 + Psme1 protein_coding retained_intron MGP_CBAJ_T0039177.1 MGP_CBAJ_G0021061.1 mouse_genomes_project 14 53663340 53665258 + Psme1 protein_coding retained_intron MGP_CBAJ_T0039178.1 MGP_CBAJ_G0021061.1 mouse_genomes_project 14 53663392 53665797 + MGP_CBAJ_P0039178 Psme1 protein_coding protein_coding MGP_CBAJ_T0039179.1 MGP_CBAJ_G0021061.1 mouse_genomes_project 14 53663429 53666236 + MGP_CBAJ_P0039179 Psme1 protein_coding protein_coding MGP_CBAJ_T0039180.1 MGP_CBAJ_G0021061.1 mouse_genomes_project 14 53663429 53666236 + MGP_CBAJ_P0039180 Psme1 protein_coding protein_coding MGP_CBAJ_T0039181.1 MGP_CBAJ_G0021061.1 mouse_genomes_project 14 53664818 53666306 + Psme1 protein_coding retained_intron MGP_CBAJ_T0039182.1 MGP_CBAJ_G0021061.1 mouse_genomes_project 14 53664888 53665802 + Psme1 protein_coding retained_intron MGP_CBAJ_T0039183.1 MGP_CBAJ_G0021061.1 mouse_genomes_project 14 53665602 53666384 + MGP_CBAJ_P0039183 Psme1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039422.1 MGP_CBAJ_G0021151.1 mouse_genomes_project 14 60327951 60354685 - MGP_CBAJ_P0039422 Spryd7 protein_coding protein_coding MGP_CBAJ_T0039423.1 MGP_CBAJ_G0021151.1 mouse_genomes_project 14 60330263 60354557 - MGP_CBAJ_P0039423 Spryd7 protein_coding protein_coding MGP_CBAJ_T0101644.1 MGP_CBAJ_G0039675.1 mouse_genomes_project 14 49252849 49253299 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0038784.1 MGP_CBAJ_G0020942.1 mouse_genomes_project 14 47287927 47288863 - MGP_CBAJ_P0038784 Olfr728 protein_coding protein_coding MGP_CBAJ_T0000894.1 MGP_CBAJ_G0000829.1 mouse_genomes_project 14 108283760 108285476 + TEC TEC MGP_CBAJ_T0009847.1 MGP_CBAJ_G0007985.1 mouse_genomes_project 14 3890046 3890131 + Mir5124b miRNA miRNA MGP_CBAJ_T0039739.1 MGP_CBAJ_G0021270.1 mouse_genomes_project 14 73521131 73524908 - MGP_CBAJ_P0039739 protein_coding protein_coding MGP_CBAJ_T0038850.1 MGP_CBAJ_G0020981.1 mouse_genomes_project 14 48401833 48403888 + MGP_CBAJ_P0038850 Rnase6 protein_coding protein_coding MGP_CBAJ_T0012818.1 MGP_CBAJ_G0010930.1 mouse_genomes_project 14 20409390 20410579 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100137.1 MGP_CBAJ_G0038392.1 mouse_genomes_project 14 111114931 111115038 - Gm24634 snoRNA snoRNA MGP_CBAJ_T0100089.1 MGP_CBAJ_G0038344.1 mouse_genomes_project 14 19001526 19001637 + Gm24679 snoRNA snoRNA MGP_CBAJ_T0000884.1 MGP_CBAJ_G0000819.1 mouse_genomes_project 14 66436039 66437411 + TEC TEC MGP_CBAJ_T0039152.1 MGP_CBAJ_G0021058.1 mouse_genomes_project 14 53644788 53645253 - MGP_CBAJ_P0039152 A730061H03Rik protein_coding protein_coding MGP_CBAJ_T0038786.1 MGP_CBAJ_G0020944.1 mouse_genomes_project 14 47346962 47347919 - MGP_CBAJ_P0038786 protein_coding protein_coding MGP_CBAJ_T0097774.1 MGP_CBAJ_G0036047.1 mouse_genomes_project 14 111322524 111322714 - pseudogene pseudogene MGP_CBAJ_T0039673.1 MGP_CBAJ_G0021252.1 mouse_genomes_project 14 70262548 70265056 + Hr protein_coding processed_transcript MGP_CBAJ_T0039674.1 MGP_CBAJ_G0021252.1 mouse_genomes_project 14 70262581 70265002 + Hr protein_coding processed_transcript MGP_CBAJ_T0039675.1 MGP_CBAJ_G0021252.1 mouse_genomes_project 14 70264023 70285490 + MGP_CBAJ_P0039675 Hr protein_coding protein_coding MGP_CBAJ_T0039676.1 MGP_CBAJ_G0021252.1 mouse_genomes_project 14 70264392 70286138 + MGP_CBAJ_P0039676 Hr protein_coding protein_coding MGP_CBAJ_T0039677.1 MGP_CBAJ_G0021252.1 mouse_genomes_project 14 70266236 70286134 + MGP_CBAJ_P0039677 Hr protein_coding protein_coding MGP_CBAJ_T0038978.1 MGP_CBAJ_G0021007.1 mouse_genomes_project 14 49930334 49931276 - MGP_CBAJ_P0038978 Olfr1512 protein_coding protein_coding MGP_CBAJ_T0006625.1 MGP_CBAJ_G0005468.1 mouse_genomes_project 14 69866842 69879116 + Gm26908 lincRNA lincRNA MGP_CBAJ_T0039470.1 MGP_CBAJ_G0021172.1 mouse_genomes_project 14 62628856 62649100 - MGP_CBAJ_P0039470 Mtmr9 protein_coding protein_coding MGP_CBAJ_T0038692.1 MGP_CBAJ_G0020918.1 mouse_genomes_project 14 43962590 44008692 - MGP_CBAJ_P0038692 Gch1 protein_coding protein_coding MGP_CBAJ_T0038415.1 MGP_CBAJ_G0020826.1 mouse_genomes_project 14 26353960 26367483 - MGP_CBAJ_P0038415 Phf7 protein_coding protein_coding MGP_CBAJ_T0037928.1 MGP_CBAJ_G0020697.1 mouse_genomes_project 14 3827362 3827802 + MGP_CBAJ_P0037928 Rpl21-ps4 protein_coding protein_coding MGP_CBAJ_T0100101.1 MGP_CBAJ_G0038356.1 mouse_genomes_project 14 49598213 49598283 + Gm22354 snoRNA snoRNA MGP_CBAJ_T0003453.1 MGP_CBAJ_G0003142.1 mouse_genomes_project 14 17269302 17330120 - Gm10248 antisense antisense MGP_CBAJ_T0038509.1 MGP_CBAJ_G0020848.1 mouse_genomes_project 14 27736840 27739253 - MGP_CBAJ_P0038509 Slc18a3 protein_coding protein_coding MGP_CBAJ_T0039209.1 MGP_CBAJ_G0021066.1 mouse_genomes_project 14 53710684 53717986 + MGP_CBAJ_P0039209 Rec8 protein_coding protein_coding MGP_CBAJ_T0039210.1 MGP_CBAJ_G0021066.1 mouse_genomes_project 14 53710830 53711464 + Rec8 protein_coding retained_intron MGP_CBAJ_T0039211.1 MGP_CBAJ_G0021066.1 mouse_genomes_project 14 53716159 53717101 + Rec8 protein_coding retained_intron MGP_CBAJ_T0039212.1 MGP_CBAJ_G0021066.1 mouse_genomes_project 14 53717509 53717986 + Rec8 protein_coding retained_intron MGP_CBAJ_T0006627.1 MGP_CBAJ_G0005470.1 mouse_genomes_project 14 75350208 75350851 - Gm15628 lincRNA lincRNA MGP_CBAJ_T0038328.1 MGP_CBAJ_G0020812.1 mouse_genomes_project 14 25948967 25969607 + MGP_CBAJ_P0038328 Itih4 protein_coding protein_coding MGP_CBAJ_T0038329.1 MGP_CBAJ_G0020812.1 mouse_genomes_project 14 25948993 25969470 + MGP_CBAJ_P0038329 Itih4 protein_coding protein_coding MGP_CBAJ_T0038330.1 MGP_CBAJ_G0020812.1 mouse_genomes_project 14 25948993 25969574 + MGP_CBAJ_P0038330 Itih4 protein_coding protein_coding MGP_CBAJ_T0038331.1 MGP_CBAJ_G0020812.1 mouse_genomes_project 14 25949012 25969472 + MGP_CBAJ_P0038331 Itih4 protein_coding protein_coding MGP_CBAJ_T0038332.1 MGP_CBAJ_G0020812.1 mouse_genomes_project 14 25966856 25969475 + Itih4 protein_coding retained_intron MGP_CBAJ_T0098850.1 MGP_CBAJ_G0037105.1 mouse_genomes_project 14 60114890 60114994 - Gm25716 snRNA snRNA MGP_CBAJ_T0003467.1 MGP_CBAJ_G0003155.1 mouse_genomes_project 14 42240594 42251329 + Gm15601 antisense antisense MGP_CBAJ_T0040003.1 MGP_CBAJ_G0021372.1 mouse_genomes_project 14 128085082 128313933 + MGP_CBAJ_P0040003 Farp1 protein_coding protein_coding MGP_CBAJ_T0040004.1 MGP_CBAJ_G0021372.1 mouse_genomes_project 14 128085446 128366412 + MGP_CBAJ_P0040004 Farp1 protein_coding protein_coding MGP_CBAJ_T0040005.1 MGP_CBAJ_G0021372.1 mouse_genomes_project 14 128159375 128318847 + Farp1 protein_coding processed_transcript MGP_CBAJ_T0040006.1 MGP_CBAJ_G0021372.1 mouse_genomes_project 14 128337640 128350702 + Farp1 protein_coding retained_intron MGP_CBAJ_T0002501.1 MGP_CBAJ_G0002406.1 mouse_genomes_project 14 52081640 52081700 + MGP_CBAJ_P0002501 Traj22 TR_J_gene TR_J_gene MGP_CBAJ_T0039608.1 MGP_CBAJ_G0021228.1 mouse_genomes_project 14 69069571 69073489 - MGP_CBAJ_P0039608 protein_coding protein_coding MGP_CBAJ_T0012868.1 MGP_CBAJ_G0010980.1 mouse_genomes_project 14 99663054 99663749 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0039410.1 MGP_CBAJ_G0021146.1 mouse_genomes_project 14 59895139 60002193 + MGP_CBAJ_P0039410 protein_coding protein_coding MGP_CBAJ_T0039411.1 MGP_CBAJ_G0021146.1 mouse_genomes_project 14 59895173 59960947 + MGP_CBAJ_P0039411 protein_coding protein_coding MGP_CBAJ_T0039412.1 MGP_CBAJ_G0021146.1 mouse_genomes_project 14 59904727 59976779 + MGP_CBAJ_P0039412 protein_coding protein_coding MGP_CBAJ_T0039413.1 MGP_CBAJ_G0021146.1 mouse_genomes_project 14 59934467 59956933 + MGP_CBAJ_P0039413 protein_coding protein_coding MGP_CBAJ_T0039414.1 MGP_CBAJ_G0021146.1 mouse_genomes_project 14 59934682 59976784 + MGP_CBAJ_P0039414 protein_coding unknown_likely_coding MGP_CBAJ_T0039415.1 MGP_CBAJ_G0021146.1 mouse_genomes_project 14 59950112 59966202 + protein_coding retained_intron MGP_CBAJ_T0009849.1 MGP_CBAJ_G0007987.1 mouse_genomes_project 14 14667566 14667635 + Mir6946 miRNA miRNA MGP_CBAJ_T0100108.1 MGP_CBAJ_G0038363.1 mouse_genomes_project 14 57117962 57118095 - Gm25614 snoRNA snoRNA MGP_CBAJ_T0002500.1 MGP_CBAJ_G0002405.1 mouse_genomes_project 14 52080473 52080533 + MGP_CBAJ_P0002500 TR_J_gene TR_J_gene MGP_CBAJ_T0039607.1 MGP_CBAJ_G0021227.1 mouse_genomes_project 14 69068533 69073489 - MGP_CBAJ_P0039607 Synb protein_coding protein_coding MGP_CBAJ_T0000891.1 MGP_CBAJ_G0000826.1 mouse_genomes_project 14 91550378 91550813 + TEC TEC MGP_CBAJ_T0006633.1 MGP_CBAJ_G0005475.1 mouse_genomes_project 14 110997330 111078731 - 1700128A07Rik lincRNA lincRNA MGP_CBAJ_T0006634.1 MGP_CBAJ_G0005475.1 mouse_genomes_project 14 111033557 111078703 - 1700128A07Rik lincRNA lincRNA MGP_CBAJ_T0012804.1 MGP_CBAJ_G0010916.1 mouse_genomes_project 14 3779982 3780806 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0039971.1 MGP_CBAJ_G0021359.1 mouse_genomes_project 14 124809899 124840795 + MGP_CBAJ_P0039971 Gpr180 protein_coding protein_coding MGP_CBAJ_T0038211.1 MGP_CBAJ_G0020780.1 mouse_genomes_project 14 20459363 20469849 + MGP_CBAJ_P0038211 Duxbl3 protein_coding protein_coding MGP_CBAJ_T0038212.1 MGP_CBAJ_G0020780.1 mouse_genomes_project 14 20459681 20470040 + MGP_CBAJ_P0038212 Duxbl3 protein_coding protein_coding MGP_CBAJ_T0038214.1 MGP_CBAJ_G0020780.1 mouse_genomes_project 14 20460319 20467909 + MGP_CBAJ_P0038214 Duxbl3 protein_coding protein_coding MGP_CBAJ_T0038216.1 MGP_CBAJ_G0020780.1 mouse_genomes_project 14 20460653 20468647 + Duxbl3 protein_coding processed_transcript MGP_CBAJ_T0038219.1 MGP_CBAJ_G0020780.1 mouse_genomes_project 14 20464120 20471219 + MGP_CBAJ_P0038219 Duxbl3 protein_coding protein_coding MGP_CBAJ_T0040058.1 MGP_CBAJ_G0021391.1 mouse_genomes_project 14 131398776 132149715 - MGP_CBAJ_P0040058 Fgf14 protein_coding protein_coding MGP_CBAJ_T0040059.1 MGP_CBAJ_G0021391.1 mouse_genomes_project 14 131399160 131627031 - MGP_CBAJ_P0040059 Fgf14 protein_coding protein_coding MGP_CBAJ_T0100134.1 MGP_CBAJ_G0038389.1 mouse_genomes_project 14 106523003 106523135 - Gm22347 snoRNA snoRNA MGP_CBAJ_T0038554.1 MGP_CBAJ_G0020867.1 mouse_genomes_project 14 29467853 29493374 + MGP_CBAJ_P0038554 Antxrl protein_coding protein_coding MGP_CBAJ_T0101650.1 MGP_CBAJ_G0039681.1 mouse_genomes_project 14 59940564 59964685 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0012815.1 MGP_CBAJ_G0010927.1 mouse_genomes_project 14 16722706 16723078 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097947.1 MGP_CBAJ_G0036220.1 mouse_genomes_project 14 23862066 23862170 - Gm23999 rRNA rRNA MGP_CBAJ_T0006571.1 MGP_CBAJ_G0005431.1 mouse_genomes_project 14 19984854 19990814 - Gm26772 lincRNA lincRNA MGP_CBAJ_T0038591.1 MGP_CBAJ_G0020882.1 mouse_genomes_project 14 31426347 31431857 - MGP_CBAJ_P0038591 4930596D02Rik protein_coding protein_coding MGP_CBAJ_T0039309.1 MGP_CBAJ_G0021114.1 mouse_genomes_project 14 55410756 55427933 - MGP_CBAJ_P0039309 Gjb6 protein_coding protein_coding MGP_CBAJ_T0039310.1 MGP_CBAJ_G0021114.1 mouse_genomes_project 14 55411735 55427603 - MGP_CBAJ_P0039310 Gjb6 protein_coding protein_coding MGP_CBAJ_T0039311.1 MGP_CBAJ_G0021114.1 mouse_genomes_project 14 55418290 55419513 - Gjb6 protein_coding processed_transcript MGP_CBAJ_T0098874.1 MGP_CBAJ_G0037129.1 mouse_genomes_project 14 121297790 121297896 - Gm24073 snRNA snRNA MGP_CBAJ_T0038062.1 MGP_CBAJ_G0020742.1 mouse_genomes_project 14 14620869 14632633 - MGP_CBAJ_P0038062 Myoz1 protein_coding protein_coding MGP_CBAJ_T0098840.1 MGP_CBAJ_G0037095.1 mouse_genomes_project 14 46636642 46636781 - Gm22116 snRNA snRNA MGP_CBAJ_T0101636.1 MGP_CBAJ_G0039667.1 mouse_genomes_project 14 31753839 31757390 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0012839.1 MGP_CBAJ_G0010951.1 mouse_genomes_project 14 49987978 49988263 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0038255.1 MGP_CBAJ_G0020789.1 mouse_genomes_project 14 21557565 21615010 - MGP_CBAJ_P0038255 Appl1 protein_coding protein_coding MGP_CBAJ_T0038256.1 MGP_CBAJ_G0020789.1 mouse_genomes_project 14 21591716 21601988 - Appl1 protein_coding retained_intron MGP_CBAJ_T0038257.1 MGP_CBAJ_G0020789.1 mouse_genomes_project 14 21593013 21614277 - Appl1 protein_coding retained_intron MGP_CBAJ_T0038258.1 MGP_CBAJ_G0020789.1 mouse_genomes_project 14 21606383 21614240 - Appl1 protein_coding retained_intron MGP_CBAJ_T0006628.1 MGP_CBAJ_G0005471.1 mouse_genomes_project 14 76953394 76959788 - 4930444M15Rik lincRNA lincRNA MGP_CBAJ_T0002484.1 MGP_CBAJ_G0002389.1 mouse_genomes_project 14 52062409 52062470 + MGP_CBAJ_P0002484 Traj40 TR_J_gene TR_J_gene MGP_CBAJ_T0038789.1 MGP_CBAJ_G0020947.1 mouse_genomes_project 14 47468728 47469722 - MGP_CBAJ_P0038789 Olfr733 protein_coding protein_coding MGP_CBAJ_T0038259.1 MGP_CBAJ_G0020790.1 mouse_genomes_project 14 21644552 21646550 + MGP_CBAJ_P0038259 Hesx1 protein_coding protein_coding MGP_CBAJ_T0009899.1 MGP_CBAJ_G0008037.1 mouse_genomes_project 14 121367327 121367414 + Mir19b-1 miRNA miRNA MGP_CBAJ_T0039032.1 MGP_CBAJ_G0021022.1 mouse_genomes_project 14 52437464 52447787 - MGP_CBAJ_P0039032 Prmt5 protein_coding protein_coding MGP_CBAJ_T0039033.1 MGP_CBAJ_G0021022.1 mouse_genomes_project 14 52441279 52443735 - MGP_CBAJ_P0039033 Prmt5 protein_coding protein_coding MGP_CBAJ_T0039034.1 MGP_CBAJ_G0021022.1 mouse_genomes_project 14 52441484 52447697 - MGP_CBAJ_P0039034 Prmt5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039035.1 MGP_CBAJ_G0021022.1 mouse_genomes_project 14 52443651 52447655 - Prmt5 protein_coding retained_intron MGP_CBAJ_T0039036.1 MGP_CBAJ_G0021022.1 mouse_genomes_project 14 52444216 52447732 - Prmt5 protein_coding retained_intron MGP_CBAJ_T0039037.1 MGP_CBAJ_G0021022.1 mouse_genomes_project 14 52444869 52445920 - Prmt5 protein_coding processed_transcript MGP_CBAJ_T0039038.1 MGP_CBAJ_G0021022.1 mouse_genomes_project 14 52446412 52447623 - Prmt5 protein_coding processed_transcript MGP_CBAJ_T0039875.1 MGP_CBAJ_G0021326.1 mouse_genomes_project 14 102920104 102941327 - MGP_CBAJ_P0039875 Dis3 protein_coding protein_coding MGP_CBAJ_T0039876.1 MGP_CBAJ_G0021326.1 mouse_genomes_project 14 102920852 102941019 - MGP_CBAJ_P0039876 Dis3 protein_coding unknown_likely_coding MGP_CBAJ_T0098847.1 MGP_CBAJ_G0037102.1 mouse_genomes_project 14 55083959 55084018 - Gm27635 snRNA snRNA MGP_CBAJ_T0009859.1 MGP_CBAJ_G0007997.1 mouse_genomes_project 14 41492888 41492957 - Mir327 miRNA miRNA MGP_CBAJ_T0009885.1 MGP_CBAJ_G0008023.1 mouse_genomes_project 14 78805558 78805664 - Mir1971 miRNA miRNA MGP_CBAJ_T0097772.1 MGP_CBAJ_G0036045.1 mouse_genomes_project 14 15050960 15060957 - pseudogene pseudogene MGP_CBAJ_T0039810.1 MGP_CBAJ_G0021295.1 mouse_genomes_project 14 78382693 78386916 - MGP_CBAJ_P0039810 Gm1587 protein_coding protein_coding MGP_CBAJ_T0003460.1 MGP_CBAJ_G0003148.1 mouse_genomes_project 14 25822025 25831911 - 1700087M22Rik antisense antisense MGP_CBAJ_T0038633.1 MGP_CBAJ_G0020900.1 mouse_genomes_project 14 37436854 37449844 - MGP_CBAJ_P0038633 Sftpd protein_coding protein_coding MGP_CBAJ_T0039353.1 MGP_CBAJ_G0021127.1 mouse_genomes_project 14 57637616 57653018 - MGP_CBAJ_P0039353 1700129C05Rik protein_coding protein_coding MGP_CBAJ_T0039354.1 MGP_CBAJ_G0021127.1 mouse_genomes_project 14 57637815 57653018 - MGP_CBAJ_P0039354 1700129C05Rik protein_coding protein_coding MGP_CBAJ_T0039355.1 MGP_CBAJ_G0021127.1 mouse_genomes_project 14 57637818 57653018 - MGP_CBAJ_P0039355 1700129C05Rik protein_coding protein_coding MGP_CBAJ_T0039356.1 MGP_CBAJ_G0021127.1 mouse_genomes_project 14 57651450 57653018 - MGP_CBAJ_P0039356 1700129C05Rik protein_coding protein_coding MGP_CBAJ_T0039098.1 MGP_CBAJ_G0021042.1 mouse_genomes_project 14 52945344 52948486 + MGP_CBAJ_P0039098 Il25 protein_coding protein_coding MGP_CBAJ_T0039858.1 MGP_CBAJ_G0021319.1 mouse_genomes_project 14 90456834 90463474 - MGP_CBAJ_P0039858 Pcdh20 protein_coding protein_coding MGP_CBAJ_T0039859.1 MGP_CBAJ_G0021319.1 mouse_genomes_project 14 90458947 90463424 - MGP_CBAJ_P0039859 Pcdh20 protein_coding protein_coding MGP_CBAJ_T0012805.1 MGP_CBAJ_G0010917.1 mouse_genomes_project 14 5663359 5663695 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0038236.1 MGP_CBAJ_G0020783.1 mouse_genomes_project 14 21127378 21127735 + MGP_CBAJ_P0038236 Gm2178 protein_coding protein_coding MGP_CBAJ_T0006626.1 MGP_CBAJ_G0005469.1 mouse_genomes_project 14 70591134 70613672 + 2410012E07Rik lincRNA lincRNA MGP_CBAJ_T0098864.1 MGP_CBAJ_G0037119.1 mouse_genomes_project 14 103238497 103238653 - Gm25130 snRNA snRNA MGP_CBAJ_T0038551.1 MGP_CBAJ_G0020864.1 mouse_genomes_project 14 29381479 29398871 - MGP_CBAJ_P0038551 Zfp488 protein_coding protein_coding MGP_CBAJ_T0038274.1 MGP_CBAJ_G0020798.1 mouse_genomes_project 14 23746990 24634263 - MGP_CBAJ_P0038274 Cacna2d3 protein_coding protein_coding MGP_CBAJ_T0002469.1 MGP_CBAJ_G0002376.1 mouse_genomes_project 14 52043927 52043990 + MGP_CBAJ_P0002469 Traj56 TR_J_gene TR_J_gene MGP_CBAJ_T0039184.1 MGP_CBAJ_G0021062.1 mouse_genomes_project 14 53666370 53669671 - MGP_CBAJ_P0039184 Emc9 protein_coding protein_coding MGP_CBAJ_T0039185.1 MGP_CBAJ_G0021062.1 mouse_genomes_project 14 53666375 53667279 - Emc9 protein_coding retained_intron MGP_CBAJ_T0039186.1 MGP_CBAJ_G0021062.1 mouse_genomes_project 14 53666376 53670027 - MGP_CBAJ_P0039186 Emc9 protein_coding protein_coding MGP_CBAJ_T0039187.1 MGP_CBAJ_G0021062.1 mouse_genomes_project 14 53668098 53669936 - Emc9 protein_coding retained_intron MGP_CBAJ_T0012874.1 MGP_CBAJ_G0010986.1 mouse_genomes_project 14 103789262 103789559 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002541.1 MGP_CBAJ_G0002444.1 mouse_genomes_project 14 52097356 52097393 + TR_J_pseudogene TR_J_pseudogene MGP_CBAJ_T0017115.1 MGP_CBAJ_G0015005.1 mouse_genomes_project 14 47941 76481 + Gm16741 processed_transcript processed_transcript MGP_CBAJ_T0039805.1 MGP_CBAJ_G0021293.1 mouse_genomes_project 14 77565965 77645930 + MGP_CBAJ_P0039805 Ccdc122 protein_coding protein_coding MGP_CBAJ_T0039806.1 MGP_CBAJ_G0021293.1 mouse_genomes_project 14 77565975 77645930 + MGP_CBAJ_P0039806 Ccdc122 protein_coding protein_coding MGP_CBAJ_T0039807.1 MGP_CBAJ_G0021293.1 mouse_genomes_project 14 77566057 77645421 + MGP_CBAJ_P0039807 Ccdc122 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039808.1 MGP_CBAJ_G0021293.1 mouse_genomes_project 14 77644700 77645983 + Ccdc122 protein_coding processed_transcript MGP_CBAJ_T0039822.1 MGP_CBAJ_G0021303.1 mouse_genomes_project 14 79952755 79991121 - MGP_CBAJ_P0039822 Zfp957 protein_coding protein_coding MGP_CBAJ_T0039823.1 MGP_CBAJ_G0021303.1 mouse_genomes_project 14 79952757 79967714 - MGP_CBAJ_P0039823 Zfp957 protein_coding protein_coding MGP_CBAJ_T0039824.1 MGP_CBAJ_G0021303.1 mouse_genomes_project 14 79966767 79991194 - Zfp957 protein_coding retained_intron MGP_CBAJ_T0039555.1 MGP_CBAJ_G0021205.1 mouse_genomes_project 14 66084314 66201654 + MGP_CBAJ_P0039555 Adra1a protein_coding protein_coding MGP_CBAJ_T0039556.1 MGP_CBAJ_G0021205.1 mouse_genomes_project 14 66084321 66201518 + MGP_CBAJ_P0039556 Adra1a protein_coding protein_coding MGP_CBAJ_T0039557.1 MGP_CBAJ_G0021205.1 mouse_genomes_project 14 66084372 66089395 + Adra1a protein_coding retained_intron MGP_CBAJ_T0039558.1 MGP_CBAJ_G0021205.1 mouse_genomes_project 14 66084404 66198174 + MGP_CBAJ_P0039558 Adra1a protein_coding protein_coding MGP_CBAJ_T0039559.1 MGP_CBAJ_G0021205.1 mouse_genomes_project 14 66084619 66200930 + MGP_CBAJ_P0039559 Adra1a protein_coding protein_coding MGP_CBAJ_T0039523.1 MGP_CBAJ_G0021197.1 mouse_genomes_project 14 65319886 65332964 + MGP_CBAJ_P0039523 Clu protein_coding protein_coding MGP_CBAJ_T0039524.1 MGP_CBAJ_G0021197.1 mouse_genomes_project 14 65320045 65327061 + MGP_CBAJ_P0039524 Clu protein_coding nonsense_mediated_decay MGP_CBAJ_T0039525.1 MGP_CBAJ_G0021197.1 mouse_genomes_project 14 65320057 65323950 + Clu protein_coding retained_intron MGP_CBAJ_T0039526.1 MGP_CBAJ_G0021197.1 mouse_genomes_project 14 65321121 65327376 + MGP_CBAJ_P0039526 Clu protein_coding protein_coding MGP_CBAJ_T0039527.1 MGP_CBAJ_G0021197.1 mouse_genomes_project 14 65322023 65327280 + MGP_CBAJ_P0039527 Clu protein_coding protein_coding MGP_CBAJ_T0039528.1 MGP_CBAJ_G0021197.1 mouse_genomes_project 14 65322199 65327257 + MGP_CBAJ_P0039528 Clu protein_coding protein_coding MGP_CBAJ_T0039529.1 MGP_CBAJ_G0021197.1 mouse_genomes_project 14 65322469 65327192 + MGP_CBAJ_P0039529 Clu protein_coding protein_coding MGP_CBAJ_T0039530.1 MGP_CBAJ_G0021197.1 mouse_genomes_project 14 65322714 65326377 + MGP_CBAJ_P0039530 Clu protein_coding protein_coding MGP_CBAJ_T0039531.1 MGP_CBAJ_G0021197.1 mouse_genomes_project 14 65326083 65327389 + Clu protein_coding retained_intron MGP_CBAJ_T0012824.1 MGP_CBAJ_G0010936.1 mouse_genomes_project 14 25856023 25856799 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0039456.1 MGP_CBAJ_G0021168.1 mouse_genomes_project 14 62241596 62293778 - MGP_CBAJ_P0039456 Gata4 protein_coding protein_coding MGP_CBAJ_T0039457.1 MGP_CBAJ_G0021168.1 mouse_genomes_project 14 62243049 62289655 - MGP_CBAJ_P0039457 Gata4 protein_coding protein_coding MGP_CBAJ_T0039458.1 MGP_CBAJ_G0021168.1 mouse_genomes_project 14 62289608 62321494 - MGP_CBAJ_P0039458 Gata4 protein_coding protein_coding MGP_CBAJ_T0039459.1 MGP_CBAJ_G0021168.1 mouse_genomes_project 14 62289621 62320922 - MGP_CBAJ_P0039459 Gata4 protein_coding protein_coding MGP_CBAJ_T0039460.1 MGP_CBAJ_G0021168.1 mouse_genomes_project 14 62289621 62320922 - MGP_CBAJ_P0039460 Gata4 protein_coding protein_coding MGP_CBAJ_T0040016.1 MGP_CBAJ_G0021379.1 mouse_genomes_project 14 129250763 129254486 + MGP_CBAJ_P0040016 Timm8a2 protein_coding protein_coding MGP_CBAJ_T0037942.1 MGP_CBAJ_G0020702.1 mouse_genomes_project 14 6153214 6506952 + MGP_CBAJ_P0037942 Synpr protein_coding protein_coding MGP_CBAJ_T0037943.1 MGP_CBAJ_G0020702.1 mouse_genomes_project 14 6330748 6449446 + MGP_CBAJ_P0037943 Synpr protein_coding protein_coding MGP_CBAJ_T0037944.1 MGP_CBAJ_G0020702.1 mouse_genomes_project 14 6330774 6453140 + Synpr protein_coding retained_intron MGP_CBAJ_T0037945.1 MGP_CBAJ_G0020702.1 mouse_genomes_project 14 6330847 6506952 + MGP_CBAJ_P0037945 Synpr protein_coding protein_coding MGP_CBAJ_T0037946.1 MGP_CBAJ_G0020702.1 mouse_genomes_project 14 6330861 6502008 + Synpr protein_coding retained_intron MGP_CBAJ_T0038352.1 MGP_CBAJ_G0020818.1 mouse_genomes_project 14 26109729 26116385 - MGP_CBAJ_P0038352 Gnl3 protein_coding protein_coding MGP_CBAJ_T0039153.1 MGP_CBAJ_G0021059.1 mouse_genomes_project 14 53644852 53654912 + MGP_CBAJ_P0039153 Dcaf11 protein_coding protein_coding MGP_CBAJ_T0039154.1 MGP_CBAJ_G0021059.1 mouse_genomes_project 14 53644864 53646288 + MGP_CBAJ_P0039154 Dcaf11 protein_coding protein_coding MGP_CBAJ_T0039155.1 MGP_CBAJ_G0021059.1 mouse_genomes_project 14 53644867 53645603 + Dcaf11 protein_coding processed_transcript MGP_CBAJ_T0039156.1 MGP_CBAJ_G0021059.1 mouse_genomes_project 14 53644871 53647780 + MGP_CBAJ_P0039156 Dcaf11 protein_coding protein_coding MGP_CBAJ_T0039157.1 MGP_CBAJ_G0021059.1 mouse_genomes_project 14 53644908 53654911 + MGP_CBAJ_P0039157 Dcaf11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039158.1 MGP_CBAJ_G0021059.1 mouse_genomes_project 14 53644967 53654382 + Dcaf11 protein_coding retained_intron MGP_CBAJ_T0039159.1 MGP_CBAJ_G0021059.1 mouse_genomes_project 14 53645328 53645946 + Dcaf11 protein_coding processed_transcript MGP_CBAJ_T0039160.1 MGP_CBAJ_G0021059.1 mouse_genomes_project 14 53645358 53654778 + MGP_CBAJ_P0039160 Dcaf11 protein_coding protein_coding MGP_CBAJ_T0039161.1 MGP_CBAJ_G0021059.1 mouse_genomes_project 14 53645364 53646290 + MGP_CBAJ_P0039161 Dcaf11 protein_coding protein_coding MGP_CBAJ_T0039162.1 MGP_CBAJ_G0021059.1 mouse_genomes_project 14 53645379 53649250 + MGP_CBAJ_P0039162 Dcaf11 protein_coding protein_coding MGP_CBAJ_T0039163.1 MGP_CBAJ_G0021059.1 mouse_genomes_project 14 53645380 53654908 + MGP_CBAJ_P0039163 Dcaf11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039164.1 MGP_CBAJ_G0021059.1 mouse_genomes_project 14 53645775 53654909 + MGP_CBAJ_P0039164 Dcaf11 protein_coding protein_coding MGP_CBAJ_T0039165.1 MGP_CBAJ_G0021059.1 mouse_genomes_project 14 53645817 53648627 + MGP_CBAJ_P0039165 Dcaf11 protein_coding protein_coding MGP_CBAJ_T0039166.1 MGP_CBAJ_G0021059.1 mouse_genomes_project 14 53645830 53654911 + Dcaf11 protein_coding retained_intron MGP_CBAJ_T0039167.1 MGP_CBAJ_G0021059.1 mouse_genomes_project 14 53645913 53654778 + MGP_CBAJ_P0039167 Dcaf11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039168.1 MGP_CBAJ_G0021059.1 mouse_genomes_project 14 53645913 53654778 + MGP_CBAJ_P0039168 Dcaf11 protein_coding protein_coding MGP_CBAJ_T0039169.1 MGP_CBAJ_G0021059.1 mouse_genomes_project 14 53649237 53649690 + Dcaf11 protein_coding retained_intron MGP_CBAJ_T0039170.1 MGP_CBAJ_G0021059.1 mouse_genomes_project 14 53650708 53654236 + Dcaf11 protein_coding processed_transcript MGP_CBAJ_T0002572.1 MGP_CBAJ_G0002465.1 mouse_genomes_project 14 50480501 50481032 + MGP_CBAJ_P0002572 TR_V_gene TR_V_gene MGP_CBAJ_T0011244.1 MGP_CBAJ_G0009382.1 mouse_genomes_project 14 31168380 31168548 + Gm27617 misc_RNA misc_RNA MGP_CBAJ_T0003449.1 MGP_CBAJ_G0003140.1 mouse_genomes_project 14 14612771 14615814 + 2810402E24Rik antisense antisense MGP_CBAJ_T0039374.1 MGP_CBAJ_G0021133.1 mouse_genomes_project 14 57960969 58006141 - MGP_CBAJ_P0039374 Setdb2 protein_coding protein_coding MGP_CBAJ_T0039375.1 MGP_CBAJ_G0021133.1 mouse_genomes_project 14 57960969 58006148 - MGP_CBAJ_P0039375 Setdb2 protein_coding protein_coding MGP_CBAJ_T0039376.1 MGP_CBAJ_G0021133.1 mouse_genomes_project 14 57961160 57971406 - Setdb2 protein_coding retained_intron MGP_CBAJ_T0039377.1 MGP_CBAJ_G0021133.1 mouse_genomes_project 14 57986527 58006139 - MGP_CBAJ_P0039377 Setdb2 protein_coding protein_coding MGP_CBAJ_T0039378.1 MGP_CBAJ_G0021133.1 mouse_genomes_project 14 57996409 58006137 - Setdb2 protein_coding processed_transcript MGP_CBAJ_T0012812.1 MGP_CBAJ_G0010924.1 mouse_genomes_project 14 12685463 12685946 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012877.1 MGP_CBAJ_G0010989.1 mouse_genomes_project 14 113669812 113670262 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009877.1 MGP_CBAJ_G0008015.1 mouse_genomes_project 14 66594232 66594350 + Gm27647 miRNA miRNA MGP_CBAJ_T0012855.1 MGP_CBAJ_G0010967.1 mouse_genomes_project 14 58789291 58789639 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009902.1 MGP_CBAJ_G0008040.1 mouse_genomes_project 14 124950202 124950305 + Mir6241 miRNA miRNA MGP_CBAJ_T0038339.1 MGP_CBAJ_G0020814.1 mouse_genomes_project 14 26005721 26019655 - MGP_CBAJ_P0038339 Itih1 protein_coding protein_coding MGP_CBAJ_T0038340.1 MGP_CBAJ_G0020814.1 mouse_genomes_project 14 26005721 26019643 - MGP_CBAJ_P0038340 Itih1 protein_coding protein_coding MGP_CBAJ_T0038341.1 MGP_CBAJ_G0020814.1 mouse_genomes_project 14 26019055 26019652 - Itih1 protein_coding retained_intron MGP_CBAJ_T0100086.1 MGP_CBAJ_G0038341.1 mouse_genomes_project 14 5057639 5057768 - Gm24578 snoRNA snoRNA MGP_CBAJ_T0098866.1 MGP_CBAJ_G0037121.1 mouse_genomes_project 14 104808089 104808190 - Gm23538 snRNA snRNA MGP_CBAJ_T0038933.1 MGP_CBAJ_G0021000.1 mouse_genomes_project 14 49693865 49733225 - MGP_CBAJ_P0038933 Supt16 protein_coding protein_coding MGP_CBAJ_T0037893.1 MGP_CBAJ_G0020686.1 mouse_genomes_project 14 297321 327187 - MGP_CBAJ_P0037893 Dnase1l3 protein_coding protein_coding MGP_CBAJ_T0037894.1 MGP_CBAJ_G0020686.1 mouse_genomes_project 14 308633 309952 - Dnase1l3 protein_coding processed_transcript MGP_CBAJ_T0039281.1 MGP_CBAJ_G0021095.1 mouse_genomes_project 14 54255372 54258321 - MGP_CBAJ_P0039281 Gzme protein_coding protein_coding MGP_CBAJ_T0000889.1 MGP_CBAJ_G0000824.1 mouse_genomes_project 14 71168941 71169481 - TEC TEC MGP_CBAJ_T0038604.1 MGP_CBAJ_G0020885.1 mouse_genomes_project 14 32811300 32825351 - MGP_CBAJ_P0038604 Rgr protein_coding protein_coding MGP_CBAJ_T0038755.1 MGP_CBAJ_G0020930.1 mouse_genomes_project 14 46105371 46163748 - MGP_CBAJ_P0038755 Exoc5 protein_coding protein_coding MGP_CBAJ_T0038756.1 MGP_CBAJ_G0020930.1 mouse_genomes_project 14 46107020 46163491 - MGP_CBAJ_P0038756 Exoc5 protein_coding protein_coding MGP_CBAJ_T0038757.1 MGP_CBAJ_G0020930.1 mouse_genomes_project 14 46108738 46113060 - Exoc5 protein_coding retained_intron MGP_CBAJ_T0038758.1 MGP_CBAJ_G0020930.1 mouse_genomes_project 14 46110020 46116537 - MGP_CBAJ_P0038758 Exoc5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038759.1 MGP_CBAJ_G0020930.1 mouse_genomes_project 14 46110726 46116801 - Exoc5 protein_coding retained_intron MGP_CBAJ_T0038760.1 MGP_CBAJ_G0020930.1 mouse_genomes_project 14 46122846 46130905 - Exoc5 protein_coding retained_intron MGP_CBAJ_T0038761.1 MGP_CBAJ_G0020930.1 mouse_genomes_project 14 46130357 46145643 - MGP_CBAJ_P0038761 Exoc5 protein_coding protein_coding MGP_CBAJ_T0009881.1 MGP_CBAJ_G0008019.1 mouse_genomes_project 14 69979128 69979214 - Gm44340 miRNA miRNA MGP_CBAJ_T0100132.1 MGP_CBAJ_G0038387.1 mouse_genomes_project 14 104551287 104551411 - Gm24345 snoRNA snoRNA MGP_CBAJ_T0038375.1 MGP_CBAJ_G0020822.1 mouse_genomes_project 14 26253796 26255650 - Stab1 protein_coding retained_intron MGP_CBAJ_T0038376.1 MGP_CBAJ_G0020822.1 mouse_genomes_project 14 26253796 26257616 - Stab1 protein_coding retained_intron MGP_CBAJ_T0038377.1 MGP_CBAJ_G0020822.1 mouse_genomes_project 14 26253796 26254632 - MGP_CBAJ_P0038377 Stab1 protein_coding protein_coding MGP_CBAJ_T0038378.1 MGP_CBAJ_G0020822.1 mouse_genomes_project 14 26253796 26285087 - MGP_CBAJ_P0038378 Stab1 protein_coding protein_coding MGP_CBAJ_T0038379.1 MGP_CBAJ_G0020822.1 mouse_genomes_project 14 26253800 26260237 - Stab1 protein_coding retained_intron MGP_CBAJ_T0038380.1 MGP_CBAJ_G0020822.1 mouse_genomes_project 14 26253800 26254958 - Stab1 protein_coding processed_transcript MGP_CBAJ_T0038381.1 MGP_CBAJ_G0020822.1 mouse_genomes_project 14 26253802 26258509 - Stab1 protein_coding retained_intron MGP_CBAJ_T0038382.1 MGP_CBAJ_G0020822.1 mouse_genomes_project 14 26254752 26255727 - Stab1 protein_coding retained_intron MGP_CBAJ_T0038383.1 MGP_CBAJ_G0020822.1 mouse_genomes_project 14 26256416 26257976 - MGP_CBAJ_P0038383 Stab1 protein_coding protein_coding MGP_CBAJ_T0038384.1 MGP_CBAJ_G0020822.1 mouse_genomes_project 14 26257167 26257781 - Stab1 protein_coding retained_intron MGP_CBAJ_T0038385.1 MGP_CBAJ_G0020822.1 mouse_genomes_project 14 26271460 26272208 - Stab1 protein_coding retained_intron MGP_CBAJ_T0038386.1 MGP_CBAJ_G0020822.1 mouse_genomes_project 14 26271460 26276653 - Stab1 protein_coding retained_intron MGP_CBAJ_T0038387.1 MGP_CBAJ_G0020822.1 mouse_genomes_project 14 26273333 26285041 - Stab1 protein_coding retained_intron MGP_CBAJ_T0039264.1 MGP_CBAJ_G0021082.1 mouse_genomes_project 14 53893783 53897645 - MGP_CBAJ_P0039264 Ripk3 protein_coding protein_coding MGP_CBAJ_T0039265.1 MGP_CBAJ_G0021082.1 mouse_genomes_project 14 53893984 53897424 - MGP_CBAJ_P0039265 Ripk3 protein_coding protein_coding MGP_CBAJ_T0037950.1 MGP_CBAJ_G0020706.1 mouse_genomes_project 14 6966349 7069230 + MGP_CBAJ_P0037950 Atxn7 protein_coding protein_coding MGP_CBAJ_T0037951.1 MGP_CBAJ_G0020706.1 mouse_genomes_project 14 6972645 7069239 + MGP_CBAJ_P0037951 Atxn7 protein_coding unknown_likely_coding MGP_CBAJ_T0039046.1 MGP_CBAJ_G0021030.1 mouse_genomes_project 14 52579241 52586545 + MGP_CBAJ_P0039046 Gm17606 protein_coding protein_coding MGP_CBAJ_T0038842.1 MGP_CBAJ_G0020976.1 mouse_genomes_project 14 48335134 48336266 - MGP_CBAJ_P0038842 Olfr750 protein_coding protein_coding MGP_CBAJ_T0003515.1 MGP_CBAJ_G0003190.1 mouse_genomes_project 14 131400079 131401483 + Gm28932 antisense antisense MGP_CBAJ_T0038632.1 MGP_CBAJ_G0020899.1 mouse_genomes_project 14 37414041 37420914 + MGP_CBAJ_P0038632 Mbl1 protein_coding protein_coding MGP_CBAJ_T0039633.1 MGP_CBAJ_G0021239.1 mouse_genomes_project 14 69790695 69806330 - MGP_CBAJ_P0039633 Ccar2 protein_coding protein_coding MGP_CBAJ_T0038783.1 MGP_CBAJ_G0020941.1 mouse_genomes_project 14 47274879 47276923 + MGP_CBAJ_P0038783 Olfr727 protein_coding protein_coding MGP_CBAJ_T0009863.1 MGP_CBAJ_G0008001.1 mouse_genomes_project 14 52555128 52555237 - Mir686 miRNA miRNA MGP_CBAJ_T0039299.1 MGP_CBAJ_G0021107.1 mouse_genomes_project 14 54931761 54992576 - MGP_CBAJ_P0039299 Pspc1 protein_coding protein_coding MGP_CBAJ_T0039300.1 MGP_CBAJ_G0021107.1 mouse_genomes_project 14 54933306 54992576 - MGP_CBAJ_P0039300 Pspc1 protein_coding protein_coding MGP_CBAJ_T0039301.1 MGP_CBAJ_G0021107.1 mouse_genomes_project 14 54959585 54972918 - Pspc1 protein_coding retained_intron MGP_CBAJ_T0039302.1 MGP_CBAJ_G0021107.1 mouse_genomes_project 14 54959908 54992187 - MGP_CBAJ_P0039302 Pspc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039372.1 MGP_CBAJ_G0021132.1 mouse_genomes_project 14 57766435 57782727 - MGP_CBAJ_P0039372 protein_coding protein_coding MGP_CBAJ_T0038490.1 MGP_CBAJ_G0020843.1 mouse_genomes_project 14 27413470 27439231 - MGP_CBAJ_P0038490 protein_coding protein_coding MGP_CBAJ_T0038491.1 MGP_CBAJ_G0020843.1 mouse_genomes_project 14 27413602 27439174 - MGP_CBAJ_P0038491 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038492.1 MGP_CBAJ_G0020843.1 mouse_genomes_project 14 27426750 27439156 - protein_coding retained_intron MGP_CBAJ_T0038493.1 MGP_CBAJ_G0020843.1 mouse_genomes_project 14 27429156 27439181 - protein_coding retained_intron MGP_CBAJ_T0038494.1 MGP_CBAJ_G0020843.1 mouse_genomes_project 14 27433875 27439207 - protein_coding retained_intron MGP_CBAJ_T0101643.1 MGP_CBAJ_G0039674.1 mouse_genomes_project 14 48437746 48438202 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0012836.1 MGP_CBAJ_G0010948.1 mouse_genomes_project 14 47883998 47884281 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0037948.1 MGP_CBAJ_G0020704.1 mouse_genomes_project 14 6729345 6849835 - MGP_CBAJ_P0037948 Gm281 protein_coding protein_coding MGP_CBAJ_T0002568.1 MGP_CBAJ_G0002462.1 mouse_genomes_project 14 50390352 50390901 + MGP_CBAJ_P0002568 TR_V_gene TR_V_gene MGP_CBAJ_T0002471.1 MGP_CBAJ_G0002378.1 mouse_genomes_project 14 52049863 52049929 + MGP_CBAJ_P0002471 Traj52 TR_J_gene TR_J_gene MGP_CBAJ_T0003487.1 MGP_CBAJ_G0003171.1 mouse_genomes_project 14 60064901 60077122 - 1700109G14Rik antisense antisense MGP_CBAJ_T0003488.1 MGP_CBAJ_G0003171.1 mouse_genomes_project 14 60066591 60089903 - 1700109G14Rik antisense antisense MGP_CBAJ_T0003489.1 MGP_CBAJ_G0003171.1 mouse_genomes_project 14 60076612 60077096 - 1700109G14Rik antisense antisense MGP_CBAJ_T0038220.1 MGP_CBAJ_G0020782.1 mouse_genomes_project 14 21023152 21147682 - MGP_CBAJ_P0038220 Slmap protein_coding protein_coding MGP_CBAJ_T0038221.1 MGP_CBAJ_G0020782.1 mouse_genomes_project 14 21023157 21083854 - MGP_CBAJ_P0038221 Slmap protein_coding protein_coding MGP_CBAJ_T0038222.1 MGP_CBAJ_G0020782.1 mouse_genomes_project 14 21023158 21070095 - MGP_CBAJ_P0038222 Slmap protein_coding protein_coding MGP_CBAJ_T0038223.1 MGP_CBAJ_G0020782.1 mouse_genomes_project 14 21023159 21146491 - MGP_CBAJ_P0038223 Slmap protein_coding protein_coding MGP_CBAJ_T0038224.1 MGP_CBAJ_G0020782.1 mouse_genomes_project 14 21023384 21146369 - MGP_CBAJ_P0038224 Slmap protein_coding protein_coding MGP_CBAJ_T0038225.1 MGP_CBAJ_G0020782.1 mouse_genomes_project 14 21023384 21146369 - MGP_CBAJ_P0038225 Slmap protein_coding protein_coding MGP_CBAJ_T0038226.1 MGP_CBAJ_G0020782.1 mouse_genomes_project 14 21024280 21147646 - MGP_CBAJ_P0038226 Slmap protein_coding protein_coding MGP_CBAJ_T0038227.1 MGP_CBAJ_G0020782.1 mouse_genomes_project 14 21024714 21070082 - MGP_CBAJ_P0038227 Slmap protein_coding protein_coding MGP_CBAJ_T0038228.1 MGP_CBAJ_G0020782.1 mouse_genomes_project 14 21032425 21052796 - MGP_CBAJ_P0038228 Slmap protein_coding protein_coding MGP_CBAJ_T0038229.1 MGP_CBAJ_G0020782.1 mouse_genomes_project 14 21037220 21052627 - Slmap protein_coding processed_transcript MGP_CBAJ_T0038230.1 MGP_CBAJ_G0020782.1 mouse_genomes_project 14 21037296 21040073 - Slmap protein_coding retained_intron MGP_CBAJ_T0038231.1 MGP_CBAJ_G0020782.1 mouse_genomes_project 14 21037519 21052862 - MGP_CBAJ_P0038231 Slmap protein_coding protein_coding MGP_CBAJ_T0038232.1 MGP_CBAJ_G0020782.1 mouse_genomes_project 14 21038245 21049193 - Slmap protein_coding retained_intron MGP_CBAJ_T0038233.1 MGP_CBAJ_G0020782.1 mouse_genomes_project 14 21047131 21052710 - Slmap protein_coding retained_intron MGP_CBAJ_T0038234.1 MGP_CBAJ_G0020782.1 mouse_genomes_project 14 21052595 21073604 - MGP_CBAJ_P0038234 Slmap protein_coding protein_coding MGP_CBAJ_T0038235.1 MGP_CBAJ_G0020782.1 mouse_genomes_project 14 21069709 21073595 - Slmap protein_coding retained_intron MGP_CBAJ_T0002538.1 MGP_CBAJ_G0002441.1 mouse_genomes_project 14 52050785 52050828 + TR_J_pseudogene TR_J_pseudogene MGP_CBAJ_T0037903.1 MGP_CBAJ_G0020691.1 mouse_genomes_project 14 587424 596852 + MGP_CBAJ_P0037903 Kctd6 protein_coding protein_coding MGP_CBAJ_T0037904.1 MGP_CBAJ_G0020691.1 mouse_genomes_project 14 587778 596846 + MGP_CBAJ_P0037904 Kctd6 protein_coding protein_coding MGP_CBAJ_T0038278.1 MGP_CBAJ_G0020801.1 mouse_genomes_project 14 24924561 24942061 + MGP_CBAJ_P0038278 Actr8 protein_coding protein_coding MGP_CBAJ_T0038279.1 MGP_CBAJ_G0020801.1 mouse_genomes_project 14 24924690 24941944 + MGP_CBAJ_P0038279 Actr8 protein_coding unknown_likely_coding MGP_CBAJ_T0012808.1 MGP_CBAJ_G0010920.1 mouse_genomes_project 14 12046702 12047800 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0039421.1 MGP_CBAJ_G0021150.1 mouse_genomes_project 14 60137046 60223242 - MGP_CBAJ_P0039421 Kpna3 protein_coding protein_coding MGP_CBAJ_T0100142.1 MGP_CBAJ_G0038397.1 mouse_genomes_project 14 125523575 125523706 + Gm22379 snoRNA snoRNA MGP_CBAJ_T0012837.1 MGP_CBAJ_G0010949.1 mouse_genomes_project 14 48642904 49246610 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0039998.1 MGP_CBAJ_G0021369.1 mouse_genomes_project 14 127224411 127399144 + MGP_CBAJ_P0039998 Mbnl2 protein_coding protein_coding MGP_CBAJ_T0039999.1 MGP_CBAJ_G0021369.1 mouse_genomes_project 14 127224411 127399144 + MGP_CBAJ_P0039999 Mbnl2 protein_coding protein_coding MGP_CBAJ_T0038343.1 MGP_CBAJ_G0020816.1 mouse_genomes_project 14 26093675 26095561 - MGP_CBAJ_P0038343 Spcs1 protein_coding protein_coding MGP_CBAJ_T0038344.1 MGP_CBAJ_G0020816.1 mouse_genomes_project 14 26093675 26095624 - MGP_CBAJ_P0038344 Spcs1 protein_coding protein_coding MGP_CBAJ_T0038345.1 MGP_CBAJ_G0020816.1 mouse_genomes_project 14 26093676 26095618 - MGP_CBAJ_P0038345 Spcs1 protein_coding protein_coding MGP_CBAJ_T0038346.1 MGP_CBAJ_G0020816.1 mouse_genomes_project 14 26093676 26095315 - MGP_CBAJ_P0038346 Spcs1 protein_coding protein_coding MGP_CBAJ_T0038347.1 MGP_CBAJ_G0020816.1 mouse_genomes_project 14 26093677 26095321 - Spcs1 protein_coding retained_intron MGP_CBAJ_T0038348.1 MGP_CBAJ_G0020816.1 mouse_genomes_project 14 26094168 26095302 - Spcs1 protein_coding retained_intron MGP_CBAJ_T0038349.1 MGP_CBAJ_G0020816.1 mouse_genomes_project 14 26094347 26095319 - MGP_CBAJ_P0038349 Spcs1 protein_coding protein_coding MGP_CBAJ_T0009901.1 MGP_CBAJ_G0008039.1 mouse_genomes_project 14 124602319 124602424 - Mir6239 miRNA miRNA MGP_CBAJ_T0038787.1 MGP_CBAJ_G0020945.1 mouse_genomes_project 14 47408725 47409706 - MGP_CBAJ_P0038787 Olfr731 protein_coding protein_coding MGP_CBAJ_T0009873.1 MGP_CBAJ_G0008011.1 mouse_genomes_project 14 61822716 61822826 + Mir6541 miRNA miRNA MGP_CBAJ_T0037949.1 MGP_CBAJ_G0020705.1 mouse_genomes_project 14 6892308 6904467 - MGP_CBAJ_P0037949 Thoc7 protein_coding protein_coding MGP_CBAJ_T0039480.1 MGP_CBAJ_G0021178.1 mouse_genomes_project 14 63236792 63246772 - MGP_CBAJ_P0039480 Prss55 protein_coding protein_coding MGP_CBAJ_T0039481.1 MGP_CBAJ_G0021178.1 mouse_genomes_project 14 63236799 63246729 - MGP_CBAJ_P0039481 Prss55 protein_coding protein_coding MGP_CBAJ_T0039482.1 MGP_CBAJ_G0021178.1 mouse_genomes_project 14 63240703 63253460 - Prss55 protein_coding processed_transcript MGP_CBAJ_T0101637.1 MGP_CBAJ_G0039668.1 mouse_genomes_project 14 41480229 41482656 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0038204.1 MGP_CBAJ_G0020778.1 mouse_genomes_project 14 20412479 20426338 + MGP_CBAJ_P0038204 protein_coding protein_coding MGP_CBAJ_T0038207.1 MGP_CBAJ_G0020778.1 mouse_genomes_project 14 20412531 20426329 + MGP_CBAJ_P0038207 protein_coding protein_coding MGP_CBAJ_T0038878.1 MGP_CBAJ_G0020991.1 mouse_genomes_project 14 49410817 49419046 - MGP_CBAJ_P0038878 Ndrg2 protein_coding protein_coding MGP_CBAJ_T0038879.1 MGP_CBAJ_G0020991.1 mouse_genomes_project 14 49410817 49419046 - MGP_CBAJ_P0038879 Ndrg2 protein_coding protein_coding MGP_CBAJ_T0039560.1 MGP_CBAJ_G0021206.1 mouse_genomes_project 14 66258864 66275481 + MGP_CBAJ_P0039560 Gm10032 protein_coding protein_coding MGP_CBAJ_T0006608.1 MGP_CBAJ_G0005456.1 mouse_genomes_project 14 55938788 55939533 + 1700039M10Rik lincRNA lincRNA MGP_CBAJ_T0039425.1 MGP_CBAJ_G0021153.1 mouse_genomes_project 14 61165913 61188211 - MGP_CBAJ_P0039425 Dleu7 protein_coding protein_coding MGP_CBAJ_T0039981.1 MGP_CBAJ_G0021365.1 mouse_genomes_project 14 125698683 125750197 + MGP_CBAJ_P0039981 Dnajc3 protein_coding protein_coding MGP_CBAJ_T0003462.1 MGP_CBAJ_G0003150.1 mouse_genomes_project 14 28746011 28750208 - Gm15512 antisense antisense MGP_CBAJ_T0037985.1 MGP_CBAJ_G0020718.1 mouse_genomes_project 14 9749309 9914573 - MGP_CBAJ_P0037985 Rarb protein_coding protein_coding MGP_CBAJ_T0012871.1 MGP_CBAJ_G0010983.1 mouse_genomes_project 14 102820063 102820384 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009892.1 MGP_CBAJ_G0008030.1 mouse_genomes_project 14 110135405 110135534 - Mir6390 miRNA miRNA MGP_CBAJ_T0006557.1 MGP_CBAJ_G0005422.1 mouse_genomes_project 14 6000661 6153073 - lincRNA lincRNA MGP_CBAJ_T0006558.1 MGP_CBAJ_G0005422.1 mouse_genomes_project 14 6001847 6014366 - lincRNA lincRNA MGP_CBAJ_T0006559.1 MGP_CBAJ_G0005422.1 mouse_genomes_project 14 6132119 6153065 - lincRNA lincRNA MGP_CBAJ_T0037935.1 MGP_CBAJ_G0020699.1 mouse_genomes_project 14 5005068 5024171 + MGP_CBAJ_P0037935 3830406C13Rik protein_coding protein_coding MGP_CBAJ_T0037936.1 MGP_CBAJ_G0020699.1 mouse_genomes_project 14 5005068 5024171 + MGP_CBAJ_P0037936 3830406C13Rik protein_coding protein_coding MGP_CBAJ_T0038563.1 MGP_CBAJ_G0020873.1 mouse_genomes_project 14 29761525 29802228 + MGP_CBAJ_P0038563 Glud1 protein_coding protein_coding MGP_CBAJ_T0038564.1 MGP_CBAJ_G0020873.1 mouse_genomes_project 14 29786069 29791619 + Glud1 protein_coding retained_intron MGP_CBAJ_T0038565.1 MGP_CBAJ_G0020873.1 mouse_genomes_project 14 29789594 29796276 + Glud1 protein_coding processed_transcript MGP_CBAJ_T0038566.1 MGP_CBAJ_G0020873.1 mouse_genomes_project 14 29791661 29799251 + MGP_CBAJ_P0038566 Glud1 protein_coding protein_coding MGP_CBAJ_T0038567.1 MGP_CBAJ_G0020873.1 mouse_genomes_project 14 29792767 29799041 + Glud1 protein_coding processed_transcript MGP_CBAJ_T0006590.1 MGP_CBAJ_G0005444.1 mouse_genomes_project 14 43325653 43333665 - Rubie lincRNA lincRNA MGP_CBAJ_T0039419.1 MGP_CBAJ_G0021148.1 mouse_genomes_project 14 60081539 60083723 + MGP_CBAJ_P0039419 Arl11 protein_coding protein_coding MGP_CBAJ_T0038269.1 MGP_CBAJ_G0020797.1 mouse_genomes_project 14 23308983 23312207 + Wnt5a protein_coding processed_transcript MGP_CBAJ_T0038270.1 MGP_CBAJ_G0020797.1 mouse_genomes_project 14 23309192 23325893 + MGP_CBAJ_P0038270 Wnt5a protein_coding protein_coding MGP_CBAJ_T0038271.1 MGP_CBAJ_G0020797.1 mouse_genomes_project 14 23313705 23315013 + Wnt5a protein_coding processed_transcript MGP_CBAJ_T0038272.1 MGP_CBAJ_G0020797.1 mouse_genomes_project 14 23314477 23326470 + Wnt5a protein_coding processed_transcript MGP_CBAJ_T0038273.1 MGP_CBAJ_G0020797.1 mouse_genomes_project 14 23314538 23314995 + Wnt5a protein_coding processed_transcript MGP_CBAJ_T0000871.1 MGP_CBAJ_G0000806.1 mouse_genomes_project 14 16113153 16116860 + TEC TEC MGP_CBAJ_T0039100.1 MGP_CBAJ_G0021044.1 mouse_genomes_project 14 52954415 52984962 - MGP_CBAJ_P0039100 Myh6 protein_coding protein_coding MGP_CBAJ_T0039101.1 MGP_CBAJ_G0021044.1 mouse_genomes_project 14 52954477 52983826 - MGP_CBAJ_P0039101 Myh6 protein_coding unknown_likely_coding MGP_CBAJ_T0039102.1 MGP_CBAJ_G0021044.1 mouse_genomes_project 14 52975269 52976104 - Myh6 protein_coding retained_intron MGP_CBAJ_T0039103.1 MGP_CBAJ_G0021044.1 mouse_genomes_project 14 52982324 52984896 - MGP_CBAJ_P0039103 Myh6 protein_coding protein_coding MGP_CBAJ_T0039104.1 MGP_CBAJ_G0021044.1 mouse_genomes_project 14 52982324 52984926 - MGP_CBAJ_P0039104 Myh6 protein_coding protein_coding MGP_CBAJ_T0039105.1 MGP_CBAJ_G0021044.1 mouse_genomes_project 14 52983635 52985248 - MGP_CBAJ_P0039105 Myh6 protein_coding protein_coding MGP_CBAJ_T0100093.1 MGP_CBAJ_G0038348.1 mouse_genomes_project 14 26112443 26112522 - Gm24916 snoRNA snoRNA MGP_CBAJ_T0038035.1 MGP_CBAJ_G0020735.1 mouse_genomes_project 14 14325924 14330644 - MGP_CBAJ_P0038035 Dnajc9 protein_coding protein_coding MGP_CBAJ_T0038684.1 MGP_CBAJ_G0020917.1 mouse_genomes_project 14 43658643 43903076 + MGP_CBAJ_P0038684 Samd4 protein_coding protein_coding MGP_CBAJ_T0038685.1 MGP_CBAJ_G0020917.1 mouse_genomes_project 14 43658754 43908379 + MGP_CBAJ_P0038685 Samd4 protein_coding protein_coding MGP_CBAJ_T0038686.1 MGP_CBAJ_G0020917.1 mouse_genomes_project 14 43659295 43660342 + Samd4 protein_coding processed_transcript MGP_CBAJ_T0038687.1 MGP_CBAJ_G0020917.1 mouse_genomes_project 14 43659870 43908373 + MGP_CBAJ_P0038687 Samd4 protein_coding protein_coding MGP_CBAJ_T0038688.1 MGP_CBAJ_G0020917.1 mouse_genomes_project 14 43801811 43803727 + Samd4 protein_coding processed_transcript MGP_CBAJ_T0038689.1 MGP_CBAJ_G0020917.1 mouse_genomes_project 14 43801818 43901565 + MGP_CBAJ_P0038689 Samd4 protein_coding protein_coding MGP_CBAJ_T0038690.1 MGP_CBAJ_G0020917.1 mouse_genomes_project 14 43816603 43901390 + MGP_CBAJ_P0038690 Samd4 protein_coding protein_coding MGP_CBAJ_T0038691.1 MGP_CBAJ_G0020917.1 mouse_genomes_project 14 43887094 43889062 + Samd4 protein_coding processed_transcript MGP_CBAJ_T0039593.1 MGP_CBAJ_G0021218.1 mouse_genomes_project 14 67714360 67721950 + MGP_CBAJ_P0039593 Nefl protein_coding protein_coding MGP_CBAJ_T0038203.1 MGP_CBAJ_G0020777.1 mouse_genomes_project 14 20411762 20424931 + protein_coding processed_transcript MGP_CBAJ_T0038205.1 MGP_CBAJ_G0020777.1 mouse_genomes_project 14 20412479 20426334 + MGP_CBAJ_P0038205 protein_coding protein_coding MGP_CBAJ_T0039957.1 MGP_CBAJ_G0021351.1 mouse_genomes_project 14 113931841 113936090 - MGP_CBAJ_P0039957 Slitrk1 protein_coding protein_coding MGP_CBAJ_T0039639.1 MGP_CBAJ_G0021241.1 mouse_genomes_project 14 69819851 69823329 - MGP_CBAJ_P0039639 Pdlim2 protein_coding protein_coding MGP_CBAJ_T0039640.1 MGP_CBAJ_G0021241.1 mouse_genomes_project 14 69820087 69823463 - MGP_CBAJ_P0039640 Pdlim2 protein_coding protein_coding MGP_CBAJ_T0039641.1 MGP_CBAJ_G0021241.1 mouse_genomes_project 14 69820105 69834440 - MGP_CBAJ_P0039641 Pdlim2 protein_coding protein_coding MGP_CBAJ_T0039642.1 MGP_CBAJ_G0021241.1 mouse_genomes_project 14 69823253 69834568 - MGP_CBAJ_P0039642 Pdlim2 protein_coding protein_coding MGP_CBAJ_T0039643.1 MGP_CBAJ_G0021241.1 mouse_genomes_project 14 69823279 69835954 - Pdlim2 protein_coding retained_intron MGP_CBAJ_T0039644.1 MGP_CBAJ_G0021241.1 mouse_genomes_project 14 69824901 69834561 - Pdlim2 protein_coding retained_intron MGP_CBAJ_T0039645.1 MGP_CBAJ_G0021241.1 mouse_genomes_project 14 69826922 69834555 - Pdlim2 protein_coding retained_intron MGP_CBAJ_T0039646.1 MGP_CBAJ_G0021241.1 mouse_genomes_project 14 69827000 69827475 - Pdlim2 protein_coding retained_intron MGP_CBAJ_T0100143.1 MGP_CBAJ_G0038398.1 mouse_genomes_project 14 131340834 131340962 + Gm25272 snoRNA snoRNA MGP_CBAJ_T0038297.1 MGP_CBAJ_G0020807.1 mouse_genomes_project 14 25626138 25643460 - MGP_CBAJ_P0038297 Prkcd protein_coding protein_coding MGP_CBAJ_T0038298.1 MGP_CBAJ_G0020807.1 mouse_genomes_project 14 25626146 25659393 - MGP_CBAJ_P0038298 Prkcd protein_coding protein_coding MGP_CBAJ_T0038299.1 MGP_CBAJ_G0020807.1 mouse_genomes_project 14 25626148 25643460 - MGP_CBAJ_P0038299 Prkcd protein_coding protein_coding MGP_CBAJ_T0038300.1 MGP_CBAJ_G0020807.1 mouse_genomes_project 14 25626387 25640980 - MGP_CBAJ_P0038300 Prkcd protein_coding protein_coding MGP_CBAJ_T0038301.1 MGP_CBAJ_G0020807.1 mouse_genomes_project 14 25626446 25630996 - Prkcd protein_coding retained_intron MGP_CBAJ_T0038302.1 MGP_CBAJ_G0020807.1 mouse_genomes_project 14 25629195 25640980 - MGP_CBAJ_P0038302 Prkcd protein_coding protein_coding MGP_CBAJ_T0038303.1 MGP_CBAJ_G0020807.1 mouse_genomes_project 14 25629195 25640980 - MGP_CBAJ_P0038303 Prkcd protein_coding protein_coding MGP_CBAJ_T0038304.1 MGP_CBAJ_G0020807.1 mouse_genomes_project 14 25631050 25659357 - Prkcd protein_coding retained_intron MGP_CBAJ_T0038305.1 MGP_CBAJ_G0020807.1 mouse_genomes_project 14 25633190 25639029 - Prkcd protein_coding retained_intron MGP_CBAJ_T0038306.1 MGP_CBAJ_G0020807.1 mouse_genomes_project 14 25633285 25638838 - Prkcd protein_coding retained_intron MGP_CBAJ_T0038307.1 MGP_CBAJ_G0020807.1 mouse_genomes_project 14 25634820 25640502 - Prkcd protein_coding retained_intron MGP_CBAJ_T0012842.1 MGP_CBAJ_G0010954.1 mouse_genomes_project 14 50382676 50421064 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0039151.1 MGP_CBAJ_G0021057.1 mouse_genomes_project 14 53622381 53633255 + MGP_CBAJ_P0039151 Pck2 protein_coding protein_coding MGP_CBAJ_T0039783.1 MGP_CBAJ_G0021288.1 mouse_genomes_project 14 76468880 76493487 - MGP_CBAJ_P0039783 Gpalpp1 protein_coding protein_coding MGP_CBAJ_T0037890.1 MGP_CBAJ_G0020684.1 mouse_genomes_project 14 95103 95574 + MGP_CBAJ_P0037890 Gm26661 protein_coding protein_coding MGP_CBAJ_T0038549.1 MGP_CBAJ_G0020862.1 mouse_genomes_project 14 29353702 29359843 + MGP_CBAJ_P0038549 Gdf2 protein_coding protein_coding MGP_CBAJ_T0011247.1 MGP_CBAJ_G0009385.1 mouse_genomes_project 14 52003220 52007031 + Gm23704 misc_RNA misc_RNA MGP_CBAJ_T0098856.1 MGP_CBAJ_G0037111.1 mouse_genomes_project 14 88091961 88092051 - Gm23926 snRNA snRNA MGP_CBAJ_T0039601.1 MGP_CBAJ_G0021223.1 mouse_genomes_project 14 68941680 68945393 + MGP_CBAJ_P0039601 Nkx2-6 protein_coding protein_coding MGP_CBAJ_T0039728.1 MGP_CBAJ_G0021265.1 mouse_genomes_project 14 73145576 73254305 - Rb1 protein_coding processed_transcript MGP_CBAJ_T0039729.1 MGP_CBAJ_G0021265.1 mouse_genomes_project 14 73149917 73294140 - MGP_CBAJ_P0039729 Rb1 protein_coding protein_coding MGP_CBAJ_T0039730.1 MGP_CBAJ_G0021265.1 mouse_genomes_project 14 73151390 73157684 - Rb1 protein_coding retained_intron MGP_CBAJ_T0039732.1 MGP_CBAJ_G0021265.1 mouse_genomes_project 14 73197354 73198595 - Rb1 protein_coding processed_transcript MGP_CBAJ_T0039733.1 MGP_CBAJ_G0021265.1 mouse_genomes_project 14 73224492 73226414 - Rb1 protein_coding retained_intron MGP_CBAJ_T0039734.1 MGP_CBAJ_G0021265.1 mouse_genomes_project 14 73246789 73293959 - MGP_CBAJ_P0039734 Rb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0006606.1 MGP_CBAJ_G0005455.1 mouse_genomes_project 14 54905645 54908727 - Gm16973 lincRNA lincRNA MGP_CBAJ_T0006607.1 MGP_CBAJ_G0005455.1 mouse_genomes_project 14 54906712 54910634 - Gm16973 lincRNA lincRNA MGP_CBAJ_T0012858.1 MGP_CBAJ_G0010970.1 mouse_genomes_project 14 64065091 64065410 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0038700.1 MGP_CBAJ_G0020921.1 mouse_genomes_project 14 44143544 44175057 + MGP_CBAJ_P0038700 Mapk1ip1l protein_coding protein_coding MGP_CBAJ_T0038701.1 MGP_CBAJ_G0020921.1 mouse_genomes_project 14 44153945 44175057 + MGP_CBAJ_P0038701 Mapk1ip1l protein_coding protein_coding MGP_CBAJ_T0002496.1 MGP_CBAJ_G0002401.1 mouse_genomes_project 14 52076656 52076715 + MGP_CBAJ_P0002496 Traj27 TR_J_gene TR_J_gene MGP_CBAJ_T0039535.1 MGP_CBAJ_G0021201.1 mouse_genomes_project 14 65520811 65542437 + MGP_CBAJ_P0039535 Chrna2 protein_coding protein_coding MGP_CBAJ_T0039536.1 MGP_CBAJ_G0021201.1 mouse_genomes_project 14 65526705 65544218 + MGP_CBAJ_P0039536 Chrna2 protein_coding protein_coding MGP_CBAJ_T0012863.1 MGP_CBAJ_G0010975.1 mouse_genomes_project 14 74906683 74920376 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0039171.1 MGP_CBAJ_G0021060.1 mouse_genomes_project 14 53660471 53661807 + MGP_CBAJ_P0039171 Fitm1 protein_coding protein_coding MGP_CBAJ_T0100136.1 MGP_CBAJ_G0038391.1 mouse_genomes_project 14 109419116 109419250 + Gm24280 snoRNA snoRNA MGP_CBAJ_T0002481.1 MGP_CBAJ_G0002386.1 mouse_genomes_project 14 52059268 52059325 + MGP_CBAJ_P0002481 Traj43 TR_J_gene TR_J_gene MGP_CBAJ_T0009898.1 MGP_CBAJ_G0008036.1 mouse_genomes_project 14 121367179 121367286 + Mir20a miRNA miRNA MGP_CBAJ_T0039873.1 MGP_CBAJ_G0021324.1 mouse_genomes_project 14 102871634 102886197 - MGP_CBAJ_P0039873 Mzt1 protein_coding protein_coding MGP_CBAJ_T0039441.1 MGP_CBAJ_G0021160.1 mouse_genomes_project 14 61959565 61967515 - MGP_CBAJ_P0039441 Defb48 protein_coding protein_coding MGP_CBAJ_T0009893.1 MGP_CBAJ_G0008031.1 mouse_genomes_project 14 113304864 113305025 + Gm24818 miRNA miRNA MGP_CBAJ_T0037891.1 MGP_CBAJ_G0020685.1 mouse_genomes_project 14 129145 284379 + MGP_CBAJ_P0037891 Flnb protein_coding protein_coding MGP_CBAJ_T0037892.1 MGP_CBAJ_G0020685.1 mouse_genomes_project 14 129340 266498 + MGP_CBAJ_P0037892 Flnb protein_coding unknown_likely_coding MGP_CBAJ_T0100113.1 MGP_CBAJ_G0038368.1 mouse_genomes_project 14 66475258 66475391 + Gm24258 snoRNA snoRNA MGP_CBAJ_T0039280.1 MGP_CBAJ_G0021094.1 mouse_genomes_project 14 54241281 54243975 - MGP_CBAJ_P0039280 Ctsg protein_coding protein_coding MGP_CBAJ_T0038575.1 MGP_CBAJ_G0020878.1 mouse_genomes_project 14 29995934 30068885 - MGP_CBAJ_P0038575 Ldb3 protein_coding protein_coding MGP_CBAJ_T0038576.1 MGP_CBAJ_G0020878.1 mouse_genomes_project 14 29995934 30068885 - MGP_CBAJ_P0038576 Ldb3 protein_coding protein_coding MGP_CBAJ_T0038577.1 MGP_CBAJ_G0020878.1 mouse_genomes_project 14 29995934 30068811 - MGP_CBAJ_P0038577 Ldb3 protein_coding protein_coding MGP_CBAJ_T0038578.1 MGP_CBAJ_G0020878.1 mouse_genomes_project 14 29995934 30068885 - MGP_CBAJ_P0038578 Ldb3 protein_coding protein_coding MGP_CBAJ_T0038579.1 MGP_CBAJ_G0020878.1 mouse_genomes_project 14 29998695 30055689 - MGP_CBAJ_P0038579 Ldb3 protein_coding unknown_likely_coding MGP_CBAJ_T0038580.1 MGP_CBAJ_G0020878.1 mouse_genomes_project 14 30036208 30068885 - MGP_CBAJ_P0038580 Ldb3 protein_coding protein_coding MGP_CBAJ_T0040000.1 MGP_CBAJ_G0021370.1 mouse_genomes_project 14 127452236 127490649 + MGP_CBAJ_P0040000 Rap2a protein_coding protein_coding MGP_CBAJ_T0040001.1 MGP_CBAJ_G0021370.1 mouse_genomes_project 14 127487055 127490649 + MGP_CBAJ_P0040001 Rap2a protein_coding protein_coding MGP_CBAJ_T0098870.1 MGP_CBAJ_G0037125.1 mouse_genomes_project 14 110826459 110826590 - Gm23459 snRNA snRNA MGP_CBAJ_T0039937.1 MGP_CBAJ_G0021343.1 mouse_genomes_project 14 108133204 108169173 - MGP_CBAJ_P0039937 Ednrb protein_coding protein_coding MGP_CBAJ_T0039938.1 MGP_CBAJ_G0021343.1 mouse_genomes_project 14 108133205 108168696 - MGP_CBAJ_P0039938 Ednrb protein_coding protein_coding MGP_CBAJ_T0012880.1 MGP_CBAJ_G0010992.1 mouse_genomes_project 14 121956127 121956727 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0039108.1 MGP_CBAJ_G0021046.1 mouse_genomes_project 14 52997575 52997666 + MGP_CBAJ_P0039108 Gm17428 protein_coding protein_coding MGP_CBAJ_T0003441.1 MGP_CBAJ_G0003137.1 mouse_genomes_project 14 6855519 6893028 + Gm11100 antisense antisense MGP_CBAJ_T0003442.1 MGP_CBAJ_G0003137.1 mouse_genomes_project 14 6876034 6893028 + Gm11100 antisense antisense MGP_CBAJ_T0038910.1 MGP_CBAJ_G0020996.1 mouse_genomes_project 14 49529988 49535991 + MGP_CBAJ_P0038910 Tmem253 protein_coding protein_coding MGP_CBAJ_T0098839.1 MGP_CBAJ_G0037094.1 mouse_genomes_project 14 46094960 46095080 - Gm23470 snRNA snRNA MGP_CBAJ_T0038908.1 MGP_CBAJ_G0020995.1 mouse_genomes_project 14 49518579 49536937 - MGP_CBAJ_P0038908 Zfp219 protein_coding protein_coding MGP_CBAJ_T0038909.1 MGP_CBAJ_G0020995.1 mouse_genomes_project 14 49518588 49535917 - MGP_CBAJ_P0038909 Zfp219 protein_coding protein_coding MGP_CBAJ_T0038911.1 MGP_CBAJ_G0020997.1 mouse_genomes_project 14 49554455 49556362 - MGP_CBAJ_P0038911 Olfr221 protein_coding protein_coding MGP_CBAJ_T0098486.1 MGP_CBAJ_G0036745.1 mouse_genomes_project 14 67262122 67264060 - Gm20667 sense_overlapping sense_overlapping MGP_CBAJ_T0100099.1 MGP_CBAJ_G0038354.1 mouse_genomes_project 14 33010232 33010365 + Gm22469 snoRNA snoRNA MGP_CBAJ_T0038796.1 MGP_CBAJ_G0020951.1 mouse_genomes_project 14 47579671 47580610 + MGP_CBAJ_P0038796 Olfr736 protein_coding protein_coding MGP_CBAJ_T0002503.1 MGP_CBAJ_G0002408.1 mouse_genomes_project 14 52083834 52083892 + MGP_CBAJ_P0002503 Traj20 TR_J_gene TR_J_gene MGP_CBAJ_T0009897.1 MGP_CBAJ_G0008035.1 mouse_genomes_project 14 121367022 121367104 + Mir19a miRNA miRNA MGP_CBAJ_T0039784.1 MGP_CBAJ_G0021289.1 mouse_genomes_project 14 76493562 76521391 + MGP_CBAJ_P0039784 Nufip1 protein_coding protein_coding MGP_CBAJ_T0012802.1 MGP_CBAJ_G0010914.1 mouse_genomes_project 14 2399574 2400175 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002557.1 MGP_CBAJ_G0002455.1 mouse_genomes_project 14 50248917 50249434 + MGP_CBAJ_P0002557 Trav5-1 TR_V_gene TR_V_gene MGP_CBAJ_T0098863.1 MGP_CBAJ_G0037118.1 mouse_genomes_project 14 103226179 103226301 - Gm22984 snRNA snRNA MGP_CBAJ_T0038070.1 MGP_CBAJ_G0020747.1 mouse_genomes_project 14 14684474 14700430 + MGP_CBAJ_P0038070 Zswim8 protein_coding protein_coding MGP_CBAJ_T0039942.1 MGP_CBAJ_G0021346.1 mouse_genomes_project 14 109557804 109582305 - MGP_CBAJ_P0039942 Rbm26 protein_coding protein_coding MGP_CBAJ_T0039943.1 MGP_CBAJ_G0021346.1 mouse_genomes_project 14 109566018 109628092 - MGP_CBAJ_P0039943 Rbm26 protein_coding protein_coding MGP_CBAJ_T0039944.1 MGP_CBAJ_G0021346.1 mouse_genomes_project 14 109566039 109628555 - MGP_CBAJ_P0039944 Rbm26 protein_coding protein_coding MGP_CBAJ_T0039945.1 MGP_CBAJ_G0021346.1 mouse_genomes_project 14 109566116 109628559 - MGP_CBAJ_P0039945 Rbm26 protein_coding protein_coding MGP_CBAJ_T0039946.1 MGP_CBAJ_G0021346.1 mouse_genomes_project 14 109567095 109628496 - MGP_CBAJ_P0039946 Rbm26 protein_coding protein_coding MGP_CBAJ_T0038028.1 MGP_CBAJ_G0020731.1 mouse_genomes_project 14 14196215 14202611 - MGP_CBAJ_P0038028 Kcnk16 protein_coding protein_coding MGP_CBAJ_T0038370.1 MGP_CBAJ_G0020820.1 mouse_genomes_project 14 26195700 26241679 - MGP_CBAJ_P0038370 Smim4 protein_coding protein_coding MGP_CBAJ_T0038371.1 MGP_CBAJ_G0020820.1 mouse_genomes_project 14 26196227 26241699 - MGP_CBAJ_P0038371 Smim4 protein_coding protein_coding MGP_CBAJ_T0038372.1 MGP_CBAJ_G0020820.1 mouse_genomes_project 14 26237438 26241624 - MGP_CBAJ_P0038372 Smim4 protein_coding protein_coding MGP_CBAJ_T0038373.1 MGP_CBAJ_G0020820.1 mouse_genomes_project 14 26237735 26241716 - MGP_CBAJ_P0038373 Smim4 protein_coding protein_coding MGP_CBAJ_T0038841.1 MGP_CBAJ_G0020975.1 mouse_genomes_project 14 48321441 48321986 - MGP_CBAJ_P0038841 Rnase12 protein_coding protein_coding MGP_CBAJ_T0038104.1 MGP_CBAJ_G0020756.1 mouse_genomes_project 14 15825431 15838916 - MGP_CBAJ_P0038104 Dusp13 protein_coding protein_coding MGP_CBAJ_T0038105.1 MGP_CBAJ_G0020756.1 mouse_genomes_project 14 15825432 15838959 - MGP_CBAJ_P0038105 Dusp13 protein_coding protein_coding MGP_CBAJ_T0038106.1 MGP_CBAJ_G0020756.1 mouse_genomes_project 14 15825432 15846116 - MGP_CBAJ_P0038106 Dusp13 protein_coding protein_coding MGP_CBAJ_T0038107.1 MGP_CBAJ_G0020756.1 mouse_genomes_project 14 15825432 15837850 - MGP_CBAJ_P0038107 Dusp13 protein_coding protein_coding MGP_CBAJ_T0038108.1 MGP_CBAJ_G0020756.1 mouse_genomes_project 14 15825432 15838945 - MGP_CBAJ_P0038108 Dusp13 protein_coding protein_coding MGP_CBAJ_T0038109.1 MGP_CBAJ_G0020756.1 mouse_genomes_project 14 15825432 15840323 - MGP_CBAJ_P0038109 Dusp13 protein_coding protein_coding MGP_CBAJ_T0038110.1 MGP_CBAJ_G0020756.1 mouse_genomes_project 14 15825432 15846114 - MGP_CBAJ_P0038110 Dusp13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038111.1 MGP_CBAJ_G0020756.1 mouse_genomes_project 14 15825435 15846136 - MGP_CBAJ_P0038111 Dusp13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038112.1 MGP_CBAJ_G0020756.1 mouse_genomes_project 14 15825626 15846114 - MGP_CBAJ_P0038112 Dusp13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038113.1 MGP_CBAJ_G0020756.1 mouse_genomes_project 14 15825686 15846120 - MGP_CBAJ_P0038113 Dusp13 protein_coding protein_coding MGP_CBAJ_T0038114.1 MGP_CBAJ_G0020756.1 mouse_genomes_project 14 15837583 15846120 - Dusp13 protein_coding processed_transcript MGP_CBAJ_T0038115.1 MGP_CBAJ_G0020756.1 mouse_genomes_project 14 15837592 15843940 - MGP_CBAJ_P0038115 Dusp13 protein_coding protein_coding MGP_CBAJ_T0038116.1 MGP_CBAJ_G0020756.1 mouse_genomes_project 14 15840955 15846132 - MGP_CBAJ_P0038116 Dusp13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038117.1 MGP_CBAJ_G0020756.1 mouse_genomes_project 14 15842320 15848675 - Dusp13 protein_coding processed_transcript MGP_CBAJ_T0039385.1 MGP_CBAJ_G0021137.1 mouse_genomes_project 14 58245260 58824927 - MGP_CBAJ_P0039385 Atp8a2 protein_coding protein_coding MGP_CBAJ_T0039386.1 MGP_CBAJ_G0021137.1 mouse_genomes_project 14 58659273 58724079 - MGP_CBAJ_P0039386 Atp8a2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039387.1 MGP_CBAJ_G0021137.1 mouse_genomes_project 14 58675398 58850143 - MGP_CBAJ_P0039387 Atp8a2 protein_coding protein_coding MGP_CBAJ_T0039388.1 MGP_CBAJ_G0021137.1 mouse_genomes_project 14 58723778 58825079 - MGP_CBAJ_P0039388 Atp8a2 protein_coding protein_coding MGP_CBAJ_T0039389.1 MGP_CBAJ_G0021137.1 mouse_genomes_project 14 58723837 58724588 - MGP_CBAJ_P0039389 Atp8a2 protein_coding protein_coding MGP_CBAJ_T0039392.1 MGP_CBAJ_G0021137.1 mouse_genomes_project 14 58836349 58850107 - Atp8a2 protein_coding processed_transcript MGP_CBAJ_T0038854.1 MGP_CBAJ_G0020985.1 mouse_genomes_project 14 48758357 48776527 + MGP_CBAJ_P0038854 Vmn2r125 protein_coding protein_coding MGP_CBAJ_T0038855.1 MGP_CBAJ_G0020986.1 mouse_genomes_project 14 48841732 48849490 + MGP_CBAJ_P0038855 Vmn2r89 protein_coding protein_coding MGP_CBAJ_T0009858.1 MGP_CBAJ_G0007996.1 mouse_genomes_project 14 30408974 30409072 + Mir346 miRNA miRNA MGP_CBAJ_T0002479.1 MGP_CBAJ_G0002384.1 mouse_genomes_project 14 52057376 52057439 + MGP_CBAJ_P0002479 Traj45 TR_J_gene TR_J_gene MGP_CBAJ_T0038995.1 MGP_CBAJ_G0021013.1 mouse_genomes_project 14 52123383 52145063 - MGP_CBAJ_P0038995 Dad1 protein_coding protein_coding MGP_CBAJ_T0038996.1 MGP_CBAJ_G0021013.1 mouse_genomes_project 14 52130486 52144873 - MGP_CBAJ_P0038996 Dad1 protein_coding protein_coding MGP_CBAJ_T0038068.1 MGP_CBAJ_G0020745.1 mouse_genomes_project 14 14671900 14677124 + MGP_CBAJ_P0038068 Fut11 protein_coding protein_coding MGP_CBAJ_T0006605.1 MGP_CBAJ_G0005454.1 mouse_genomes_project 14 53981455 53993602 - Gm26751 lincRNA lincRNA MGP_CBAJ_T0006586.1 MGP_CBAJ_G0005440.1 mouse_genomes_project 14 42321875 42323750 - A530076I17Rik lincRNA lincRNA MGP_CBAJ_T0000895.1 MGP_CBAJ_G0000830.1 mouse_genomes_project 14 121125690 121125954 - TEC TEC MGP_CBAJ_T0002466.1 MGP_CBAJ_G0002374.1 mouse_genomes_project 14 52041950 52042013 + MGP_CBAJ_P0002466 Traj58 TR_J_gene TR_J_gene MGP_CBAJ_T0039247.1 MGP_CBAJ_G0021074.1 mouse_genomes_project 14 53803378 53816862 - MGP_CBAJ_P0039247 Tgm1 protein_coding protein_coding MGP_CBAJ_T0039248.1 MGP_CBAJ_G0021074.1 mouse_genomes_project 14 53803378 53816862 - MGP_CBAJ_P0039248 Tgm1 protein_coding protein_coding MGP_CBAJ_T0039249.1 MGP_CBAJ_G0021074.1 mouse_genomes_project 14 53803378 53816458 - MGP_CBAJ_P0039249 Tgm1 protein_coding protein_coding MGP_CBAJ_T0006639.1 MGP_CBAJ_G0005480.1 mouse_genomes_project 14 125480803 125488858 - Gm27198 lincRNA lincRNA MGP_CBAJ_T0012845.1 MGP_CBAJ_G0010957.1 mouse_genomes_project 14 51184261 51184997 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100116.1 MGP_CBAJ_G0038371.1 mouse_genomes_project 14 70122605 70122715 - Gm22725 snoRNA snoRNA MGP_CBAJ_T0038826.1 MGP_CBAJ_G0020970.1 mouse_genomes_project 14 48200113 48203735 - MGP_CBAJ_P0038826 Tmem55b protein_coding protein_coding MGP_CBAJ_T0038827.1 MGP_CBAJ_G0020970.1 mouse_genomes_project 14 48200118 48203757 - MGP_CBAJ_P0038827 Tmem55b protein_coding protein_coding MGP_CBAJ_T0038828.1 MGP_CBAJ_G0020970.1 mouse_genomes_project 14 48200120 48203752 - Tmem55b protein_coding retained_intron MGP_CBAJ_T0038829.1 MGP_CBAJ_G0020970.1 mouse_genomes_project 14 48200769 48202113 - MGP_CBAJ_P0038829 Tmem55b protein_coding protein_coding MGP_CBAJ_T0038830.1 MGP_CBAJ_G0020970.1 mouse_genomes_project 14 48201729 48203704 - MGP_CBAJ_P0038830 Tmem55b protein_coding protein_coding MGP_CBAJ_T0038831.1 MGP_CBAJ_G0020970.1 mouse_genomes_project 14 48201825 48203734 - Tmem55b protein_coding retained_intron MGP_CBAJ_T0038832.1 MGP_CBAJ_G0020970.1 mouse_genomes_project 14 48201927 48202667 - Tmem55b protein_coding retained_intron MGP_CBAJ_T0038833.1 MGP_CBAJ_G0020970.1 mouse_genomes_project 14 48202161 48203739 - Tmem55b protein_coding retained_intron MGP_CBAJ_T0038834.1 MGP_CBAJ_G0020970.1 mouse_genomes_project 14 48202238 48203701 - Tmem55b protein_coding retained_intron MGP_CBAJ_T0002575.1 MGP_CBAJ_G0002468.1 mouse_genomes_project 14 50703987 50704581 + MGP_CBAJ_P0002575 TR_V_gene TR_V_gene MGP_CBAJ_T0037952.1 MGP_CBAJ_G0020707.1 mouse_genomes_project 14 7074121 7082841 - MGP_CBAJ_P0037952 Psmd6 protein_coding protein_coding MGP_CBAJ_T0037953.1 MGP_CBAJ_G0020707.1 mouse_genomes_project 14 7075849 7078489 - Psmd6 protein_coding retained_intron MGP_CBAJ_T0037954.1 MGP_CBAJ_G0020707.1 mouse_genomes_project 14 7078133 7079291 - Psmd6 protein_coding retained_intron MGP_CBAJ_T0037955.1 MGP_CBAJ_G0020707.1 mouse_genomes_project 14 7081567 7082790 - Psmd6 protein_coding retained_intron MGP_CBAJ_T0039253.1 MGP_CBAJ_G0021076.1 mouse_genomes_project 14 53842309 53842950 - Dhrs1 protein_coding retained_intron MGP_CBAJ_T0039254.1 MGP_CBAJ_G0021076.1 mouse_genomes_project 14 53842309 53848891 - Dhrs1 protein_coding retained_intron MGP_CBAJ_T0039255.1 MGP_CBAJ_G0021076.1 mouse_genomes_project 14 53842311 53848982 - MGP_CBAJ_P0039255 Dhrs1 protein_coding protein_coding MGP_CBAJ_T0039256.1 MGP_CBAJ_G0021076.1 mouse_genomes_project 14 53842523 53843434 - Dhrs1 protein_coding retained_intron MGP_CBAJ_T0039753.1 MGP_CBAJ_G0021274.1 mouse_genomes_project 14 74925297 75130474 - MGP_CBAJ_P0039753 Lrch1 protein_coding protein_coding MGP_CBAJ_T0039754.1 MGP_CBAJ_G0021274.1 mouse_genomes_project 14 74937475 75130257 - MGP_CBAJ_P0039754 Lrch1 protein_coding unknown_likely_coding MGP_CBAJ_T0006588.1 MGP_CBAJ_G0005442.1 mouse_genomes_project 14 43170774 43190921 + Gm15221 lincRNA lincRNA MGP_CBAJ_T0037963.1 MGP_CBAJ_G0020712.1 mouse_genomes_project 14 7732975 7848700 + MGP_CBAJ_P0037963 Slc4a7 protein_coding protein_coding MGP_CBAJ_T0002515.1 MGP_CBAJ_G0002420.1 mouse_genomes_project 14 52101218 52101280 + MGP_CBAJ_P0002515 Traj5 TR_J_gene TR_J_gene MGP_CBAJ_T0039424.1 MGP_CBAJ_G0021152.1 mouse_genomes_project 14 60415222 60419645 + MGP_CBAJ_P0039424 Kcnrg protein_coding protein_coding MGP_CBAJ_T0039522.1 MGP_CBAJ_G0021196.1 mouse_genomes_project 14 65269357 65305216 - MGP_CBAJ_P0039522 Scara3 protein_coding protein_coding MGP_CBAJ_T0017171.1 MGP_CBAJ_G0015026.1 mouse_genomes_project 14 124926185 124928713 + Gm4675 processed_transcript processed_transcript MGP_CBAJ_T0017172.1 MGP_CBAJ_G0015026.1 mouse_genomes_project 14 124926833 124952768 + Gm4675 processed_transcript processed_transcript MGP_CBAJ_T0017173.1 MGP_CBAJ_G0015026.1 mouse_genomes_project 14 124945306 124945849 + Gm4675 processed_transcript processed_transcript MGP_CBAJ_T0003506.1 MGP_CBAJ_G0003184.1 mouse_genomes_project 14 76162139 76163667 - Gm4285 antisense antisense MGP_CBAJ_T0038196.1 MGP_CBAJ_G0020774.1 mouse_genomes_project 14 20393438 20397111 - MGP_CBAJ_P0038196 Tmem254c protein_coding protein_coding MGP_CBAJ_T0038199.1 MGP_CBAJ_G0020774.1 mouse_genomes_project 14 20393608 20396689 - MGP_CBAJ_P0038199 Tmem254c protein_coding protein_coding MGP_CBAJ_T0038200.1 MGP_CBAJ_G0020774.1 mouse_genomes_project 14 20394188 20397082 - MGP_CBAJ_P0038200 Tmem254c protein_coding nonsense_mediated_decay MGP_CBAJ_T0038201.1 MGP_CBAJ_G0020774.1 mouse_genomes_project 14 20394195 20395227 - Tmem254c protein_coding retained_intron MGP_CBAJ_T0002456.1 MGP_CBAJ_G0002365.1 mouse_genomes_project 14 52011863 52011879 + MGP_CBAJ_P0002456 Trdd2 TR_D_gene TR_D_gene MGP_CBAJ_T0002482.1 MGP_CBAJ_G0002387.1 mouse_genomes_project 14 52060263 52060327 + MGP_CBAJ_P0002482 Traj42 TR_J_gene TR_J_gene MGP_CBAJ_T0039627.1 MGP_CBAJ_G0021233.1 mouse_genomes_project 14 69306859 69325040 - MGP_CBAJ_P0039627 Chmp7 protein_coding protein_coding MGP_CBAJ_T0098868.1 MGP_CBAJ_G0037123.1 mouse_genomes_project 14 109718293 109718400 + Gm22290 snRNA snRNA MGP_CBAJ_T0039592.1 MGP_CBAJ_G0021217.1 mouse_genomes_project 14 67713083 67764060 - MGP_CBAJ_P0039592 Nefm protein_coding protein_coding MGP_CBAJ_T0039594.1 MGP_CBAJ_G0021217.1 mouse_genomes_project 14 67758559 67764060 - MGP_CBAJ_P0039594 Nefm protein_coding protein_coding MGP_CBAJ_T0037917.1 MGP_CBAJ_G0020694.1 mouse_genomes_project 14 725267 760920 - MGP_CBAJ_P0037917 Oit1 protein_coding protein_coding MGP_CBAJ_T0012814.1 MGP_CBAJ_G0010926.1 mouse_genomes_project 14 14326651 14326774 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0038026.1 MGP_CBAJ_G0020729.1 mouse_genomes_project 14 13979630 13987349 - MGP_CBAJ_P0038026 Saysd1 protein_coding protein_coding MGP_CBAJ_T0038432.1 MGP_CBAJ_G0020831.1 mouse_genomes_project 14 26611414 26633509 - MGP_CBAJ_P0038432 Mettl6 protein_coding protein_coding MGP_CBAJ_T0000893.1 MGP_CBAJ_G0000828.1 mouse_genomes_project 14 103688014 103742864 - TEC TEC MGP_CBAJ_T0101041.1 MGP_CBAJ_G0039269.1 mouse_genomes_project 14 45193944 45226774 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101042.1 MGP_CBAJ_G0039269.1 mouse_genomes_project 14 45223553 45226567 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0002589.1 MGP_CBAJ_G0002482.1 mouse_genomes_project 14 51094553 51095166 + MGP_CBAJ_P0002589 TR_V_gene TR_V_gene MGP_CBAJ_T0038425.1 MGP_CBAJ_G0020829.1 mouse_genomes_project 14 26452741 26491895 + MGP_CBAJ_P0038425 Capn7 protein_coding protein_coding MGP_CBAJ_T0038426.1 MGP_CBAJ_G0020829.1 mouse_genomes_project 14 26452778 26491897 + MGP_CBAJ_P0038426 Capn7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038427.1 MGP_CBAJ_G0020829.1 mouse_genomes_project 14 26452810 26491895 + MGP_CBAJ_P0038427 Capn7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0000877.1 MGP_CBAJ_G0000812.1 mouse_genomes_project 14 52884074 52892155 + TEC TEC MGP_CBAJ_T0006582.1 MGP_CBAJ_G0005437.1 mouse_genomes_project 14 27981774 27983643 + Gm28651 lincRNA lincRNA MGP_CBAJ_T0038612.1 MGP_CBAJ_G0020891.1 mouse_genomes_project 14 34301814 35573286 - MGP_CBAJ_P0038612 Nrg3 protein_coding protein_coding MGP_CBAJ_T0038613.1 MGP_CBAJ_G0020891.1 mouse_genomes_project 14 34303339 35573023 - MGP_CBAJ_P0038613 Nrg3 protein_coding protein_coding MGP_CBAJ_T0038614.1 MGP_CBAJ_G0020891.1 mouse_genomes_project 14 34303355 35573025 - MGP_CBAJ_P0038614 Nrg3 protein_coding protein_coding MGP_CBAJ_T0038615.1 MGP_CBAJ_G0020891.1 mouse_genomes_project 14 35047853 35572864 - Nrg3 protein_coding retained_intron MGP_CBAJ_T0012878.1 MGP_CBAJ_G0010990.1 mouse_genomes_project 14 118418376 118418856 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0038260.1 MGP_CBAJ_G0020791.1 mouse_genomes_project 14 21697700 21774094 + MGP_CBAJ_P0038260 Il17rd protein_coding protein_coding MGP_CBAJ_T0038069.1 MGP_CBAJ_G0020746.1 mouse_genomes_project 14 14679953 14681342 + MGP_CBAJ_P0038069 Chchd1 protein_coding protein_coding MGP_CBAJ_T0037956.1 MGP_CBAJ_G0020708.1 mouse_genomes_project 14 7144715 7145738 - MGP_CBAJ_P0037956 Olfr720 protein_coding protein_coding MGP_CBAJ_T0037957.1 MGP_CBAJ_G0020708.1 mouse_genomes_project 14 7145317 7156301 - MGP_CBAJ_P0037957 Olfr720 protein_coding protein_coding MGP_CBAJ_T0038388.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26287375 26307958 - MGP_CBAJ_P0038388 Nisch protein_coding protein_coding MGP_CBAJ_T0038389.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26287375 26323213 - MGP_CBAJ_P0038389 Nisch protein_coding protein_coding MGP_CBAJ_T0038390.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26287703 26303635 - MGP_CBAJ_P0038390 Nisch protein_coding protein_coding MGP_CBAJ_T0038391.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26287811 26290728 - MGP_CBAJ_P0038391 Nisch protein_coding protein_coding MGP_CBAJ_T0038392.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26288459 26290174 - MGP_CBAJ_P0038392 Nisch protein_coding protein_coding MGP_CBAJ_T0038393.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26290872 26293016 - MGP_CBAJ_P0038393 Nisch protein_coding protein_coding MGP_CBAJ_T0038394.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26293323 26319819 - MGP_CBAJ_P0038394 Nisch protein_coding protein_coding MGP_CBAJ_T0038395.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26293633 26297898 - MGP_CBAJ_P0038395 Nisch protein_coding protein_coding MGP_CBAJ_T0038396.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26293819 26301750 - MGP_CBAJ_P0038396 Nisch protein_coding nonsense_mediated_decay MGP_CBAJ_T0038397.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26293928 26309047 - Nisch protein_coding processed_transcript MGP_CBAJ_T0038398.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26294126 26302070 - Nisch protein_coding processed_transcript MGP_CBAJ_T0038399.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26297277 26299257 - Nisch protein_coding processed_transcript MGP_CBAJ_T0038400.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26299740 26323238 - MGP_CBAJ_P0038400 Nisch protein_coding protein_coding MGP_CBAJ_T0038401.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26299940 26301377 - Nisch protein_coding processed_transcript MGP_CBAJ_T0038402.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26301438 26307925 - MGP_CBAJ_P0038402 Nisch protein_coding protein_coding MGP_CBAJ_T0038403.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26302117 26323129 - MGP_CBAJ_P0038403 Nisch protein_coding protein_coding MGP_CBAJ_T0038404.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26302153 26323129 - MGP_CBAJ_P0038404 Nisch protein_coding nonsense_mediated_decay MGP_CBAJ_T0038405.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26302791 26303880 - Nisch protein_coding processed_transcript MGP_CBAJ_T0038406.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26303540 26319740 - MGP_CBAJ_P0038406 Nisch protein_coding nonsense_mediated_decay MGP_CBAJ_T0038407.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26304767 26307517 - Nisch protein_coding retained_intron MGP_CBAJ_T0038408.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26317372 26323129 - Nisch protein_coding processed_transcript MGP_CBAJ_T0038409.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26318294 26323130 - MGP_CBAJ_P0038409 Nisch protein_coding protein_coding MGP_CBAJ_T0038410.1 MGP_CBAJ_G0020823.1 mouse_genomes_project 14 26319734 26333362 - Nisch protein_coding processed_transcript MGP_CBAJ_T0012801.1 MGP_CBAJ_G0010913.1 mouse_genomes_project 14 104656 105479 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097954.1 MGP_CBAJ_G0036227.1 mouse_genomes_project 14 78929748 78929863 - Gm26197 rRNA rRNA MGP_CBAJ_T0039141.1 MGP_CBAJ_G0021055.1 mouse_genomes_project 14 53589231 53596214 + MGP_CBAJ_P0039141 Cpne6 protein_coding protein_coding MGP_CBAJ_T0039142.1 MGP_CBAJ_G0021055.1 mouse_genomes_project 14 53589234 53596214 + MGP_CBAJ_P0039142 Cpne6 protein_coding protein_coding MGP_CBAJ_T0039143.1 MGP_CBAJ_G0021055.1 mouse_genomes_project 14 53589261 53596213 + Cpne6 protein_coding retained_intron MGP_CBAJ_T0039144.1 MGP_CBAJ_G0021055.1 mouse_genomes_project 14 53589383 53592475 + MGP_CBAJ_P0039144 Cpne6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039145.1 MGP_CBAJ_G0021055.1 mouse_genomes_project 14 53590097 53596214 + Cpne6 protein_coding retained_intron MGP_CBAJ_T0039146.1 MGP_CBAJ_G0021055.1 mouse_genomes_project 14 53590146 53596214 + MGP_CBAJ_P0039146 Cpne6 protein_coding protein_coding MGP_CBAJ_T0039147.1 MGP_CBAJ_G0021055.1 mouse_genomes_project 14 53590771 53596212 + MGP_CBAJ_P0039147 Cpne6 protein_coding protein_coding MGP_CBAJ_T0039097.1 MGP_CBAJ_G0021041.1 mouse_genomes_project 14 52928514 52939426 - MGP_CBAJ_P0039097 Efs protein_coding protein_coding MGP_CBAJ_T0011245.1 MGP_CBAJ_G0009383.1 mouse_genomes_project 14 36517230 36517409 - Gm22726 misc_RNA misc_RNA MGP_CBAJ_T0098871.1 MGP_CBAJ_G0037126.1 mouse_genomes_project 14 115752936 115753043 - Gm23242 snRNA snRNA MGP_CBAJ_T0098830.1 MGP_CBAJ_G0037085.1 mouse_genomes_project 14 15917792 15917937 + Gm23502 snRNA snRNA MGP_CBAJ_T0098829.1 MGP_CBAJ_G0037084.1 mouse_genomes_project 14 15521223 15521315 + Gm25864 snRNA snRNA MGP_CBAJ_T0002657.1 MGP_CBAJ_G0002537.1 mouse_genomes_project 14 51249284 51249837 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0039438.1 MGP_CBAJ_G0021158.1 mouse_genomes_project 14 61614406 61705444 - MGP_CBAJ_P0039438 Ints6 protein_coding protein_coding MGP_CBAJ_T0039439.1 MGP_CBAJ_G0021158.1 mouse_genomes_project 14 61633796 61704990 - MGP_CBAJ_P0039439 Ints6 protein_coding unknown_likely_coding MGP_CBAJ_T0039278.1 MGP_CBAJ_G0021092.1 mouse_genomes_project 14 54206624 54209118 - MGP_CBAJ_P0039278 Cma2 protein_coding protein_coding MGP_CBAJ_T0011240.1 MGP_CBAJ_G0009378.1 mouse_genomes_project 14 15302466 15302702 + Gm26372 misc_RNA misc_RNA MGP_CBAJ_T0002506.1 MGP_CBAJ_G0002411.1 mouse_genomes_project 14 52089191 52089254 + MGP_CBAJ_P0002506 Traj17 TR_J_gene TR_J_gene MGP_CBAJ_T0009874.1 MGP_CBAJ_G0008012.1 mouse_genomes_project 14 62844041 62844120 + Mir598 miRNA miRNA MGP_CBAJ_T0006599.1 MGP_CBAJ_G0005449.1 mouse_genomes_project 14 48582864 48588146 + Gm21718 lincRNA lincRNA MGP_CBAJ_T0006600.1 MGP_CBAJ_G0005449.1 mouse_genomes_project 14 48584190 48589155 + Gm21718 lincRNA lincRNA MGP_CBAJ_T0002603.1 MGP_CBAJ_G0002493.1 mouse_genomes_project 14 51741811 51742423 + MGP_CBAJ_P0002603 Trdv1 TR_V_gene TR_V_gene MGP_CBAJ_T0002604.1 MGP_CBAJ_G0002493.1 mouse_genomes_project 14 51741811 51742423 + MGP_CBAJ_P0002604 Trdv1 TR_V_gene TR_V_gene MGP_CBAJ_T0006589.1 MGP_CBAJ_G0005443.1 mouse_genomes_project 14 43311605 43323804 + E130120K24Rik lincRNA lincRNA MGP_CBAJ_T0038018.1 MGP_CBAJ_G0020726.1 mouse_genomes_project 14 13596698 13663172 + MGP_CBAJ_P0038018 Nid2 protein_coding protein_coding MGP_CBAJ_T0002542.1 MGP_CBAJ_G0002445.1 mouse_genomes_project 14 52106771 52106800 + TR_J_pseudogene TR_J_pseudogene MGP_CBAJ_T0012850.1 MGP_CBAJ_G0010962.1 mouse_genomes_project 14 54395851 54396860 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098836.1 MGP_CBAJ_G0037091.1 mouse_genomes_project 14 45693392 45693496 + Gm23469 snRNA snRNA MGP_CBAJ_T0100109.1 MGP_CBAJ_G0038364.1 mouse_genomes_project 14 61442750 61442880 + Gm24625 snoRNA snoRNA MGP_CBAJ_T0038437.1 MGP_CBAJ_G0020834.1 mouse_genomes_project 14 26691265 26791719 - MGP_CBAJ_P0038437 Hacl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038441.1 MGP_CBAJ_G0020834.1 mouse_genomes_project 14 26744191 26791785 - MGP_CBAJ_P0038441 Hacl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038442.1 MGP_CBAJ_G0020834.1 mouse_genomes_project 14 26752693 26791805 - MGP_CBAJ_P0038442 Hacl1 protein_coding protein_coding MGP_CBAJ_T0038443.1 MGP_CBAJ_G0020834.1 mouse_genomes_project 14 26753135 26759660 - Hacl1 protein_coding processed_transcript MGP_CBAJ_T0038444.1 MGP_CBAJ_G0020834.1 mouse_genomes_project 14 26753439 26755677 - Hacl1 protein_coding processed_transcript MGP_CBAJ_T0038445.1 MGP_CBAJ_G0020834.1 mouse_genomes_project 14 26753481 26791719 - MGP_CBAJ_P0038445 Hacl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038446.1 MGP_CBAJ_G0020834.1 mouse_genomes_project 14 26753481 26791719 - MGP_CBAJ_P0038446 Hacl1 protein_coding protein_coding MGP_CBAJ_T0038447.1 MGP_CBAJ_G0020834.1 mouse_genomes_project 14 26753481 26791753 - MGP_CBAJ_P0038447 Hacl1 protein_coding protein_coding MGP_CBAJ_T0038448.1 MGP_CBAJ_G0020834.1 mouse_genomes_project 14 26753481 26791719 - MGP_CBAJ_P0038448 Hacl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038449.1 MGP_CBAJ_G0020834.1 mouse_genomes_project 14 26771768 26792013 - MGP_CBAJ_P0038449 Hacl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038450.1 MGP_CBAJ_G0020834.1 mouse_genomes_project 14 26775097 26792098 - MGP_CBAJ_P0038450 Hacl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038451.1 MGP_CBAJ_G0020834.1 mouse_genomes_project 14 26775909 26791787 - Hacl1 protein_coding retained_intron MGP_CBAJ_T0038452.1 MGP_CBAJ_G0020834.1 mouse_genomes_project 14 26780834 26791752 - Hacl1 protein_coding retained_intron MGP_CBAJ_T0038453.1 MGP_CBAJ_G0020834.1 mouse_genomes_project 14 26780973 26792127 - Hacl1 protein_coding retained_intron MGP_CBAJ_T0002580.1 MGP_CBAJ_G0002473.1 mouse_genomes_project 14 50764593 50765066 + MGP_CBAJ_P0002580 TR_V_gene TR_V_gene MGP_CBAJ_T0039563.1 MGP_CBAJ_G0021209.1 mouse_genomes_project 14 66408534 66417398 + MGP_CBAJ_P0039563 Pnma2 protein_coding protein_coding MGP_CBAJ_T0039564.1 MGP_CBAJ_G0021209.1 mouse_genomes_project 14 66408572 66416163 + MGP_CBAJ_P0039564 Pnma2 protein_coding protein_coding MGP_CBAJ_T0039565.1 MGP_CBAJ_G0021209.1 mouse_genomes_project 14 66408606 66412070 + Pnma2 protein_coding processed_transcript MGP_CBAJ_T0039566.1 MGP_CBAJ_G0021209.1 mouse_genomes_project 14 66411659 66413378 + Pnma2 protein_coding processed_transcript MGP_CBAJ_T0038630.1 MGP_CBAJ_G0020898.1 mouse_genomes_project 14 37390456 37393151 + MGP_CBAJ_P0038630 Sftpa1 protein_coding protein_coding MGP_CBAJ_T0038631.1 MGP_CBAJ_G0020898.1 mouse_genomes_project 14 37390462 37395127 + MGP_CBAJ_P0038631 Sftpa1 protein_coding protein_coding MGP_CBAJ_T0038266.1 MGP_CBAJ_G0020796.1 mouse_genomes_project 14 22357808 23279387 + MGP_CBAJ_P0038266 Erc2 protein_coding protein_coding MGP_CBAJ_T0038267.1 MGP_CBAJ_G0020796.1 mouse_genomes_project 14 22385891 22915478 + MGP_CBAJ_P0038267 Erc2 protein_coding unknown_likely_coding MGP_CBAJ_T0038268.1 MGP_CBAJ_G0020796.1 mouse_genomes_project 14 22385891 23105036 + MGP_CBAJ_P0038268 Erc2 protein_coding unknown_likely_coding MGP_CBAJ_T0098827.1 MGP_CBAJ_G0037082.1 mouse_genomes_project 14 11950983 11951139 + Gm22350 snRNA snRNA MGP_CBAJ_T0012866.1 MGP_CBAJ_G0010978.1 mouse_genomes_project 14 81220082 81220835 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0038677.1 MGP_CBAJ_G0020915.1 mouse_genomes_project 14 43584122 43597973 - MGP_CBAJ_P0038677 Gmfb protein_coding protein_coding MGP_CBAJ_T0038678.1 MGP_CBAJ_G0020915.1 mouse_genomes_project 14 43584122 43597973 - MGP_CBAJ_P0038678 Gmfb protein_coding protein_coding MGP_CBAJ_T0038679.1 MGP_CBAJ_G0020915.1 mouse_genomes_project 14 43590246 43595555 - MGP_CBAJ_P0038679 Gmfb protein_coding protein_coding MGP_CBAJ_T0006637.1 MGP_CBAJ_G0005478.1 mouse_genomes_project 14 125063997 125084910 + Gm26791 lincRNA lincRNA MGP_CBAJ_T0002577.1 MGP_CBAJ_G0002470.1 mouse_genomes_project 14 50735204 51057017 + MGP_CBAJ_P0002577 TR_V_gene TR_V_gene MGP_CBAJ_T0011239.1 MGP_CBAJ_G0009377.1 mouse_genomes_project 14 11313838 11314159 - Gm24140 misc_RNA misc_RNA MGP_CBAJ_T0039821.1 MGP_CBAJ_G0021302.1 mouse_genomes_project 14 79575008 79938203 + MGP_CBAJ_P0039821 Vwa8 protein_coding protein_coding MGP_CBAJ_T0009884.1 MGP_CBAJ_G0008022.1 mouse_genomes_project 14 75485730 75485833 + Gm44482 miRNA miRNA MGP_CBAJ_T0038057.1 MGP_CBAJ_G0020741.1 mouse_genomes_project 14 14513075 14590197 - MGP_CBAJ_P0038057 Usp54 protein_coding protein_coding MGP_CBAJ_T0038058.1 MGP_CBAJ_G0020741.1 mouse_genomes_project 14 14513075 14579035 - MGP_CBAJ_P0038058 Usp54 protein_coding protein_coding MGP_CBAJ_T0038059.1 MGP_CBAJ_G0020741.1 mouse_genomes_project 14 14544734 14553615 - MGP_CBAJ_P0038059 Usp54 protein_coding protein_coding MGP_CBAJ_T0038060.1 MGP_CBAJ_G0020741.1 mouse_genomes_project 14 14548723 14577137 - Usp54 protein_coding retained_intron MGP_CBAJ_T0038061.1 MGP_CBAJ_G0020741.1 mouse_genomes_project 14 14550779 14590197 - Usp54 protein_coding retained_intron MGP_CBAJ_T0038460.1 MGP_CBAJ_G0020838.1 mouse_genomes_project 14 27297392 27302436 - MGP_CBAJ_P0038460 Dph3 protein_coding protein_coding MGP_CBAJ_T0038461.1 MGP_CBAJ_G0020838.1 mouse_genomes_project 14 27297395 27302436 - MGP_CBAJ_P0038461 Dph3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038462.1 MGP_CBAJ_G0020838.1 mouse_genomes_project 14 27297395 27302436 - MGP_CBAJ_P0038462 Dph3 protein_coding protein_coding MGP_CBAJ_T0038463.1 MGP_CBAJ_G0020838.1 mouse_genomes_project 14 27299584 27302436 - MGP_CBAJ_P0038463 Dph3 protein_coding protein_coding MGP_CBAJ_T0038464.1 MGP_CBAJ_G0020838.1 mouse_genomes_project 14 27299698 27302519 - Dph3 protein_coding processed_transcript MGP_CBAJ_T0038465.1 MGP_CBAJ_G0020838.1 mouse_genomes_project 14 27299702 27302113 - Dph3 protein_coding retained_intron MGP_CBAJ_T0038466.1 MGP_CBAJ_G0020838.1 mouse_genomes_project 14 27301522 27302436 - MGP_CBAJ_P0038466 Dph3 protein_coding protein_coding MGP_CBAJ_T0038520.1 MGP_CBAJ_G0020856.1 mouse_genomes_project 14 28323635 28347474 + MGP_CBAJ_P0038520 Lrrc18 protein_coding protein_coding MGP_CBAJ_T0038521.1 MGP_CBAJ_G0020856.1 mouse_genomes_project 14 28323651 28341578 + MGP_CBAJ_P0038521 Lrrc18 protein_coding protein_coding MGP_CBAJ_T0038522.1 MGP_CBAJ_G0020856.1 mouse_genomes_project 14 28323656 28340860 + MGP_CBAJ_P0038522 Lrrc18 protein_coding protein_coding MGP_CBAJ_T0038523.1 MGP_CBAJ_G0020856.1 mouse_genomes_project 14 28323699 28341021 + MGP_CBAJ_P0038523 Lrrc18 protein_coding protein_coding MGP_CBAJ_T0038524.1 MGP_CBAJ_G0020856.1 mouse_genomes_project 14 28323711 28346337 + MGP_CBAJ_P0038524 Lrrc18 protein_coding protein_coding MGP_CBAJ_T0038525.1 MGP_CBAJ_G0020856.1 mouse_genomes_project 14 28327518 28340641 + Lrrc18 protein_coding processed_transcript MGP_CBAJ_T0002508.1 MGP_CBAJ_G0002413.1 mouse_genomes_project 14 52091846 52091906 + MGP_CBAJ_P0002508 Traj15 TR_J_gene TR_J_gene MGP_CBAJ_T0039777.1 MGP_CBAJ_G0021283.1 mouse_genomes_project 14 75995820 76055219 - MGP_CBAJ_P0039777 Cog3 protein_coding protein_coding MGP_CBAJ_T0006635.1 MGP_CBAJ_G0005476.1 mouse_genomes_project 14 121365901 121369750 + Mir17hg lincRNA lincRNA MGP_CBAJ_T0000879.1 MGP_CBAJ_G0000814.1 mouse_genomes_project 14 53130766 53131805 - TEC TEC MGP_CBAJ_T0039947.1 MGP_CBAJ_G0021347.1 mouse_genomes_project 14 109730898 109788738 + MGP_CBAJ_P0039947 Ndfip2 protein_coding protein_coding MGP_CBAJ_T0039948.1 MGP_CBAJ_G0021347.1 mouse_genomes_project 14 109731043 109788744 + MGP_CBAJ_P0039948 Ndfip2 protein_coding protein_coding MGP_CBAJ_T0039949.1 MGP_CBAJ_G0021347.1 mouse_genomes_project 14 109731143 109766923 + Ndfip2 protein_coding retained_intron MGP_CBAJ_T0039950.1 MGP_CBAJ_G0021347.1 mouse_genomes_project 14 109764262 109788307 + Ndfip2 protein_coding retained_intron MGP_CBAJ_T0039951.1 MGP_CBAJ_G0021347.1 mouse_genomes_project 14 109764658 109788241 + Ndfip2 protein_coding retained_intron MGP_CBAJ_T0039952.1 MGP_CBAJ_G0021347.1 mouse_genomes_project 14 109766523 109788307 + Ndfip2 protein_coding processed_transcript MGP_CBAJ_T0039802.1 MGP_CBAJ_G0021292.1 mouse_genomes_project 14 77553258 77565835 - MGP_CBAJ_P0039802 Lacc1 protein_coding protein_coding MGP_CBAJ_T0039803.1 MGP_CBAJ_G0021292.1 mouse_genomes_project 14 77561495 77566098 - Lacc1 protein_coding retained_intron MGP_CBAJ_T0039804.1 MGP_CBAJ_G0021292.1 mouse_genomes_project 14 77564105 77565237 - MGP_CBAJ_P0039804 Lacc1 protein_coding protein_coding MGP_CBAJ_T0039684.1 MGP_CBAJ_G0021257.1 mouse_genomes_project 14 70375115 70381137 - MGP_CBAJ_P0039684 Npm2 protein_coding protein_coding MGP_CBAJ_T0038031.1 MGP_CBAJ_G0020734.1 mouse_genomes_project 14 14289532 14309872 + MGP_CBAJ_P0038031 Fam149b protein_coding protein_coding MGP_CBAJ_T0038032.1 MGP_CBAJ_G0020734.1 mouse_genomes_project 14 14289532 14324780 + MGP_CBAJ_P0038032 Fam149b protein_coding protein_coding MGP_CBAJ_T0038033.1 MGP_CBAJ_G0020734.1 mouse_genomes_project 14 14289532 14324780 + MGP_CBAJ_P0038033 Fam149b protein_coding protein_coding MGP_CBAJ_T0038034.1 MGP_CBAJ_G0020734.1 mouse_genomes_project 14 14289592 14324780 + MGP_CBAJ_P0038034 Fam149b protein_coding protein_coding MGP_CBAJ_T0039965.1 MGP_CBAJ_G0021356.1 mouse_genomes_project 14 123483248 124628155 + MGP_CBAJ_P0039965 Gpc6 protein_coding protein_coding MGP_CBAJ_T0039966.1 MGP_CBAJ_G0021356.1 mouse_genomes_project 14 123483266 124261978 + Gpc6 protein_coding retained_intron MGP_CBAJ_T0039967.1 MGP_CBAJ_G0021356.1 mouse_genomes_project 14 123483381 124625262 + MGP_CBAJ_P0039967 Gpc6 protein_coding protein_coding MGP_CBAJ_T0039968.1 MGP_CBAJ_G0021356.1 mouse_genomes_project 14 123483482 124624124 + MGP_CBAJ_P0039968 Gpc6 protein_coding protein_coding MGP_CBAJ_T0002454.1 MGP_CBAJ_G0002364.1 mouse_genomes_project 14 51999640 51999649 + MGP_CBAJ_P0002454 Trdd1 TR_D_gene TR_D_gene MGP_CBAJ_T0002455.1 MGP_CBAJ_G0002364.1 mouse_genomes_project 14 51999640 51999651 + Trdd1 TR_D_gene processed_transcript MGP_CBAJ_T0100120.1 MGP_CBAJ_G0038375.1 mouse_genomes_project 14 84781462 84781596 + Gm24774 snoRNA snoRNA MGP_CBAJ_T0002576.1 MGP_CBAJ_G0002469.1 mouse_genomes_project 14 50704049 50704581 + MGP_CBAJ_P0002576 TR_V_gene TR_V_gene MGP_CBAJ_T0039502.1 MGP_CBAJ_G0021186.1 mouse_genomes_project 14 64465163 64536186 - MGP_CBAJ_P0039502 Fzd3 protein_coding protein_coding MGP_CBAJ_T0039503.1 MGP_CBAJ_G0021186.1 mouse_genomes_project 14 64473856 64499378 - Fzd3 protein_coding processed_transcript MGP_CBAJ_T0038914.1 MGP_CBAJ_G0020999.1 mouse_genomes_project 14 49641802 49694756 + MGP_CBAJ_P0038914 Rpgrip1 protein_coding protein_coding MGP_CBAJ_T0038915.1 MGP_CBAJ_G0020999.1 mouse_genomes_project 14 49642002 49693893 + MGP_CBAJ_P0038915 Rpgrip1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038916.1 MGP_CBAJ_G0020999.1 mouse_genomes_project 14 49642021 49651832 + Rpgrip1 protein_coding retained_intron MGP_CBAJ_T0038917.1 MGP_CBAJ_G0020999.1 mouse_genomes_project 14 49642028 49692875 + Rpgrip1 protein_coding retained_intron MGP_CBAJ_T0038918.1 MGP_CBAJ_G0020999.1 mouse_genomes_project 14 49642038 49694788 + MGP_CBAJ_P0038918 Rpgrip1 protein_coding protein_coding MGP_CBAJ_T0038919.1 MGP_CBAJ_G0020999.1 mouse_genomes_project 14 49643289 49693665 + MGP_CBAJ_P0038919 Rpgrip1 protein_coding protein_coding MGP_CBAJ_T0038920.1 MGP_CBAJ_G0020999.1 mouse_genomes_project 14 49645684 49668710 + Rpgrip1 protein_coding retained_intron MGP_CBAJ_T0038921.1 MGP_CBAJ_G0020999.1 mouse_genomes_project 14 49649913 49650495 + Rpgrip1 protein_coding retained_intron MGP_CBAJ_T0038922.1 MGP_CBAJ_G0020999.1 mouse_genomes_project 14 49652054 49674434 + MGP_CBAJ_P0038922 Rpgrip1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038923.1 MGP_CBAJ_G0020999.1 mouse_genomes_project 14 49670379 49683096 + Rpgrip1 protein_coding retained_intron MGP_CBAJ_T0038924.1 MGP_CBAJ_G0020999.1 mouse_genomes_project 14 49670424 49694787 + Rpgrip1 protein_coding retained_intron MGP_CBAJ_T0038925.1 MGP_CBAJ_G0020999.1 mouse_genomes_project 14 49679202 49682998 + MGP_CBAJ_P0038925 Rpgrip1 protein_coding protein_coding MGP_CBAJ_T0038926.1 MGP_CBAJ_G0020999.1 mouse_genomes_project 14 49679262 49684212 + MGP_CBAJ_P0038926 Rpgrip1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038927.1 MGP_CBAJ_G0020999.1 mouse_genomes_project 14 49680841 49683188 + Rpgrip1 protein_coding retained_intron MGP_CBAJ_T0038928.1 MGP_CBAJ_G0020999.1 mouse_genomes_project 14 49683209 49693743 + MGP_CBAJ_P0038928 Rpgrip1 protein_coding protein_coding MGP_CBAJ_T0038929.1 MGP_CBAJ_G0020999.1 mouse_genomes_project 14 49683292 49684432 + Rpgrip1 protein_coding retained_intron MGP_CBAJ_T0038930.1 MGP_CBAJ_G0020999.1 mouse_genomes_project 14 49684158 49693587 + MGP_CBAJ_P0038930 Rpgrip1 protein_coding protein_coding MGP_CBAJ_T0038931.1 MGP_CBAJ_G0020999.1 mouse_genomes_project 14 49685750 49689747 + Rpgrip1 protein_coding retained_intron MGP_CBAJ_T0038932.1 MGP_CBAJ_G0020999.1 mouse_genomes_project 14 49691900 49696996 + MGP_CBAJ_P0038932 Rpgrip1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0003464.1 MGP_CBAJ_G0003152.1 mouse_genomes_project 14 34474458 34485673 + Gm20641 antisense antisense MGP_CBAJ_T0098835.1 MGP_CBAJ_G0037090.1 mouse_genomes_project 14 36625262 36625369 + Gm24388 snRNA snRNA MGP_CBAJ_T0039357.1 MGP_CBAJ_G0021128.1 mouse_genomes_project 14 57670473 57690135 - MGP_CBAJ_P0039357 Gm5142 protein_coding protein_coding MGP_CBAJ_T0012835.1 MGP_CBAJ_G0010947.1 mouse_genomes_project 14 46801262 46801906 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098833.1 MGP_CBAJ_G0037088.1 mouse_genomes_project 14 32511185 32511291 + Gm25204 snRNA snRNA MGP_CBAJ_T0039518.1 MGP_CBAJ_G0021194.1 mouse_genomes_project 14 65164173 65179128 - MGP_CBAJ_P0039518 Esco2 protein_coding protein_coding MGP_CBAJ_T0039519.1 MGP_CBAJ_G0021194.1 mouse_genomes_project 14 65171147 65172343 - Esco2 protein_coding processed_transcript MGP_CBAJ_T0039520.1 MGP_CBAJ_G0021194.1 mouse_genomes_project 14 65172096 65174079 - Esco2 protein_coding processed_transcript MGP_CBAJ_T0011248.1 MGP_CBAJ_G0009386.1 mouse_genomes_project 14 54734675 54734782 + Gm22431 misc_RNA misc_RNA MGP_CBAJ_T0002585.1 MGP_CBAJ_G0002478.1 mouse_genomes_project 14 51019341 51019943 + MGP_CBAJ_P0002585 TR_V_gene TR_V_gene MGP_CBAJ_T0039115.1 MGP_CBAJ_G0021049.1 mouse_genomes_project 14 53104779 53136838 - MGP_CBAJ_P0039115 Zfhx2 protein_coding protein_coding MGP_CBAJ_T0039116.1 MGP_CBAJ_G0021049.1 mouse_genomes_project 14 53110720 53116754 - Zfhx2 protein_coding retained_intron MGP_CBAJ_T0039117.1 MGP_CBAJ_G0021049.1 mouse_genomes_project 14 53119091 53124976 - Zfhx2 protein_coding retained_intron MGP_CBAJ_T0039118.1 MGP_CBAJ_G0021049.1 mouse_genomes_project 14 53134085 53136556 - Zfhx2 protein_coding retained_intron MGP_CBAJ_T0101634.1 MGP_CBAJ_G0039665.1 mouse_genomes_project 14 20340692 20348290 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0038805.1 MGP_CBAJ_G0020960.1 mouse_genomes_project 14 47920087 47927411 - MGP_CBAJ_P0038805 protein_coding protein_coding MGP_CBAJ_T0038063.1 MGP_CBAJ_G0020743.1 mouse_genomes_project 14 14635029 14645426 - MGP_CBAJ_P0038063 Synpo2l protein_coding protein_coding MGP_CBAJ_T0038064.1 MGP_CBAJ_G0020743.1 mouse_genomes_project 14 14635031 14640658 - MGP_CBAJ_P0038064 Synpo2l protein_coding protein_coding MGP_CBAJ_T0038065.1 MGP_CBAJ_G0020743.1 mouse_genomes_project 14 14635501 14645473 - MGP_CBAJ_P0038065 Synpo2l protein_coding protein_coding MGP_CBAJ_T0037895.1 MGP_CBAJ_G0020687.1 mouse_genomes_project 14 340839 402009 + MGP_CBAJ_P0037895 Abhd6 protein_coding unknown_likely_coding MGP_CBAJ_T0037896.1 MGP_CBAJ_G0020687.1 mouse_genomes_project 14 340850 402919 + MGP_CBAJ_P0037896 Abhd6 protein_coding protein_coding MGP_CBAJ_T0037897.1 MGP_CBAJ_G0020687.1 mouse_genomes_project 14 340914 401308 + MGP_CBAJ_P0037897 Abhd6 protein_coding protein_coding MGP_CBAJ_T0100088.1 MGP_CBAJ_G0038343.1 mouse_genomes_project 14 14111267 14111384 - Gm24912 snoRNA snoRNA MGP_CBAJ_T0039603.1 MGP_CBAJ_G0021225.1 mouse_genomes_project 14 69021011 69064302 - MGP_CBAJ_P0039603 Slc25a37 protein_coding protein_coding MGP_CBAJ_T0039604.1 MGP_CBAJ_G0021225.1 mouse_genomes_project 14 69021014 69064302 - Slc25a37 protein_coding retained_intron MGP_CBAJ_T0039605.1 MGP_CBAJ_G0021225.1 mouse_genomes_project 14 69023339 69064157 - MGP_CBAJ_P0039605 Slc25a37 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012811.1 MGP_CBAJ_G0010923.1 mouse_genomes_project 14 12685461 12685873 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0003474.1 MGP_CBAJ_G0003161.1 mouse_genomes_project 14 52588760 52595280 + 4930579G18Rik antisense antisense MGP_CBAJ_T0039731.1 MGP_CBAJ_G0021266.1 mouse_genomes_project 14 73196706 73202098 + MGP_CBAJ_P0039731 Lpar6 protein_coding protein_coding MGP_CBAJ_T0009854.1 MGP_CBAJ_G0007992.1 mouse_genomes_project 14 21289427 21289489 - Mir7672 miRNA miRNA MGP_CBAJ_T0039634.1 MGP_CBAJ_G0021240.1 mouse_genomes_project 14 69806923 69812021 - MGP_CBAJ_P0039634 9930012K11Rik protein_coding protein_coding MGP_CBAJ_T0039635.1 MGP_CBAJ_G0021240.1 mouse_genomes_project 14 69806923 69812021 - MGP_CBAJ_P0039635 9930012K11Rik protein_coding protein_coding MGP_CBAJ_T0039636.1 MGP_CBAJ_G0021240.1 mouse_genomes_project 14 69806926 69809437 - 9930012K11Rik protein_coding retained_intron MGP_CBAJ_T0039637.1 MGP_CBAJ_G0021240.1 mouse_genomes_project 14 69807416 69808986 - MGP_CBAJ_P0039637 9930012K11Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0039638.1 MGP_CBAJ_G0021240.1 mouse_genomes_project 14 69807549 69809329 - 9930012K11Rik protein_coding retained_intron MGP_CBAJ_T0100125.1 MGP_CBAJ_G0038380.1 mouse_genomes_project 14 95056912 95057042 - Gm24127 snoRNA snoRNA MGP_CBAJ_T0039738.1 MGP_CBAJ_G0021269.1 mouse_genomes_project 14 73518553 73553831 - MGP_CBAJ_P0039738 protein_coding protein_coding MGP_CBAJ_T0002488.1 MGP_CBAJ_G0002393.1 mouse_genomes_project 14 52068262 52068324 + MGP_CBAJ_P0002488 Traj35 TR_J_gene TR_J_gene MGP_CBAJ_T0012825.1 MGP_CBAJ_G0010937.1 mouse_genomes_project 14 27509341 27510497 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012867.1 MGP_CBAJ_G0010979.1 mouse_genomes_project 14 90332825 90333809 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0039289.1 MGP_CBAJ_G0021103.1 mouse_genomes_project 14 54575074 54724025 + MGP_CBAJ_P0039289 Rnf17 protein_coding protein_coding MGP_CBAJ_T0038607.1 MGP_CBAJ_G0020888.1 mouse_genomes_project 14 32857603 32878039 - MGP_CBAJ_P0038607 Cdhr1 protein_coding protein_coding MGP_CBAJ_T0003492.1 MGP_CBAJ_G0003174.1 mouse_genomes_project 14 63262613 63267609 - 4930471C04Rik antisense antisense MGP_CBAJ_T0038517.1 MGP_CBAJ_G0020854.1 mouse_genomes_project 14 28173063 28262264 + MGP_CBAJ_P0038517 Vstm4 protein_coding protein_coding MGP_CBAJ_T0009871.1 MGP_CBAJ_G0008009.1 mouse_genomes_project 14 60444439 60444523 - Mir15a miRNA miRNA MGP_CBAJ_T0002554.1 MGP_CBAJ_G0002453.1 mouse_genomes_project 14 50183026 50183880 + MGP_CBAJ_P0002554 Trav2 TR_V_gene TR_V_gene MGP_CBAJ_T0002555.1 MGP_CBAJ_G0002453.1 mouse_genomes_project 14 50183121 50183880 + MGP_CBAJ_P0002555 Trav2 TR_V_gene TR_V_gene MGP_CBAJ_T0039918.1 MGP_CBAJ_G0021339.1 mouse_genomes_project 14 107304069 107325419 - MGP_CBAJ_P0039918 Fbxl3 protein_coding protein_coding MGP_CBAJ_T0039919.1 MGP_CBAJ_G0021339.1 mouse_genomes_project 14 107304864 107324864 - MGP_CBAJ_P0039919 Fbxl3 protein_coding protein_coding MGP_CBAJ_T0039920.1 MGP_CBAJ_G0021339.1 mouse_genomes_project 14 107305514 107324840 - MGP_CBAJ_P0039920 Fbxl3 protein_coding protein_coding MGP_CBAJ_T0039921.1 MGP_CBAJ_G0021339.1 mouse_genomes_project 14 107306935 107315682 - Fbxl3 protein_coding retained_intron MGP_CBAJ_T0039922.1 MGP_CBAJ_G0021339.1 mouse_genomes_project 14 107315278 107325431 - MGP_CBAJ_P0039922 Fbxl3 protein_coding protein_coding MGP_CBAJ_T0039923.1 MGP_CBAJ_G0021339.1 mouse_genomes_project 14 107315316 107321613 - MGP_CBAJ_P0039923 Fbxl3 protein_coding protein_coding MGP_CBAJ_T0038516.1 MGP_CBAJ_G0020853.1 mouse_genomes_project 14 28150075 28152903 + MGP_CBAJ_P0038516 Fam170b protein_coding protein_coding MGP_CBAJ_T0038505.1 MGP_CBAJ_G0020845.1 mouse_genomes_project 14 27569339 27597312 + MGP_CBAJ_P0038505 Ogdhl protein_coding unknown_likely_coding MGP_CBAJ_T0038506.1 MGP_CBAJ_G0020845.1 mouse_genomes_project 14 27569365 27596996 + MGP_CBAJ_P0038506 Ogdhl protein_coding protein_coding MGP_CBAJ_T0038353.1 MGP_CBAJ_G0020819.1 mouse_genomes_project 14 26116433 26234530 + MGP_CBAJ_P0038353 Pbrm1 protein_coding protein_coding MGP_CBAJ_T0038354.1 MGP_CBAJ_G0020819.1 mouse_genomes_project 14 26116433 26231841 + MGP_CBAJ_P0038354 Pbrm1 protein_coding protein_coding MGP_CBAJ_T0038355.1 MGP_CBAJ_G0020819.1 mouse_genomes_project 14 26116444 26124747 + MGP_CBAJ_P0038355 Pbrm1 protein_coding protein_coding MGP_CBAJ_T0038356.1 MGP_CBAJ_G0020819.1 mouse_genomes_project 14 26116452 26190167 + MGP_CBAJ_P0038356 Pbrm1 protein_coding protein_coding MGP_CBAJ_T0038357.1 MGP_CBAJ_G0020819.1 mouse_genomes_project 14 26116465 26231907 + MGP_CBAJ_P0038357 Pbrm1 protein_coding protein_coding MGP_CBAJ_T0038358.1 MGP_CBAJ_G0020819.1 mouse_genomes_project 14 26116472 26124715 + MGP_CBAJ_P0038358 Pbrm1 protein_coding protein_coding MGP_CBAJ_T0038359.1 MGP_CBAJ_G0020819.1 mouse_genomes_project 14 26116494 26129263 + Pbrm1 protein_coding processed_transcript MGP_CBAJ_T0038360.1 MGP_CBAJ_G0020819.1 mouse_genomes_project 14 26116503 26232059 + MGP_CBAJ_P0038360 Pbrm1 protein_coding protein_coding MGP_CBAJ_T0038361.1 MGP_CBAJ_G0020819.1 mouse_genomes_project 14 26122723 26226885 + MGP_CBAJ_P0038361 Pbrm1 protein_coding protein_coding MGP_CBAJ_T0038362.1 MGP_CBAJ_G0020819.1 mouse_genomes_project 14 26122723 26231906 + MGP_CBAJ_P0038362 Pbrm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038363.1 MGP_CBAJ_G0020819.1 mouse_genomes_project 14 26122726 26231888 + MGP_CBAJ_P0038363 Pbrm1 protein_coding protein_coding MGP_CBAJ_T0038364.1 MGP_CBAJ_G0020819.1 mouse_genomes_project 14 26122726 26232960 + MGP_CBAJ_P0038364 Pbrm1 protein_coding protein_coding MGP_CBAJ_T0038365.1 MGP_CBAJ_G0020819.1 mouse_genomes_project 14 26122726 26231887 + MGP_CBAJ_P0038365 Pbrm1 protein_coding protein_coding MGP_CBAJ_T0038366.1 MGP_CBAJ_G0020819.1 mouse_genomes_project 14 26122726 26231907 + MGP_CBAJ_P0038366 Pbrm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038367.1 MGP_CBAJ_G0020819.1 mouse_genomes_project 14 26122727 26232977 + MGP_CBAJ_P0038367 Pbrm1 protein_coding protein_coding MGP_CBAJ_T0038368.1 MGP_CBAJ_G0020819.1 mouse_genomes_project 14 26124694 26192613 + MGP_CBAJ_P0038368 Pbrm1 protein_coding protein_coding MGP_CBAJ_T0038369.1 MGP_CBAJ_G0020819.1 mouse_genomes_project 14 26191772 26195609 + Pbrm1 protein_coding retained_intron MGP_CBAJ_T0011241.1 MGP_CBAJ_G0009379.1 mouse_genomes_project 14 26675436 26675738 - Gm24057 misc_RNA misc_RNA MGP_CBAJ_T0003456.1 MGP_CBAJ_G0003144.1 mouse_genomes_project 14 19886845 19892232 - Zmiz1os1 antisense antisense MGP_CBAJ_T0039600.1 MGP_CBAJ_G0021222.1 mouse_genomes_project 14 68771461 68788341 + MGP_CBAJ_P0039600 Stc1 protein_coding protein_coding MGP_CBAJ_T0040022.1 MGP_CBAJ_G0021383.1 mouse_genomes_project 14 129737112 129745995 - MGP_CBAJ_P0040022 Zic5 protein_coding protein_coding MGP_CBAJ_T0040023.1 MGP_CBAJ_G0021383.1 mouse_genomes_project 14 129739507 129740336 - Zic5 protein_coding processed_transcript MGP_CBAJ_T0098858.1 MGP_CBAJ_G0037113.1 mouse_genomes_project 14 91601000 91601116 + Gm25886 snRNA snRNA MGP_CBAJ_T0012827.1 MGP_CBAJ_G0010939.1 mouse_genomes_project 14 36159538 36159874 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002566.1 MGP_CBAJ_G0002461.1 mouse_genomes_project 14 50369167 50369647 + MGP_CBAJ_P0002566 Trav6d-4 TR_V_gene TR_V_gene MGP_CBAJ_T0002567.1 MGP_CBAJ_G0002461.1 mouse_genomes_project 14 50369198 50369647 + MGP_CBAJ_P0002567 Trav6d-4 TR_V_gene TR_V_gene MGP_CBAJ_T0100117.1 MGP_CBAJ_G0038372.1 mouse_genomes_project 14 76169099 76169229 + Snora31 snoRNA snoRNA MGP_CBAJ_T0039976.1 MGP_CBAJ_G0021363.1 mouse_genomes_project 14 125539428 125631569 + MGP_CBAJ_P0039976 Cldn10 protein_coding protein_coding MGP_CBAJ_T0039977.1 MGP_CBAJ_G0021363.1 mouse_genomes_project 14 125539438 125631570 + MGP_CBAJ_P0039977 Cldn10 protein_coding protein_coding MGP_CBAJ_T0039978.1 MGP_CBAJ_G0021363.1 mouse_genomes_project 14 125608811 125632536 + MGP_CBAJ_P0039978 Cldn10 protein_coding protein_coding MGP_CBAJ_T0038810.1 MGP_CBAJ_G0020965.1 mouse_genomes_project 14 48086803 48139754 - MGP_CBAJ_P0038810 Tep1 protein_coding unknown_likely_coding MGP_CBAJ_T0038811.1 MGP_CBAJ_G0020965.1 mouse_genomes_project 14 48086803 48139740 - MGP_CBAJ_P0038811 Tep1 protein_coding unknown_likely_coding MGP_CBAJ_T0039597.1 MGP_CBAJ_G0021220.1 mouse_genomes_project 14 68221273 68241669 - MGP_CBAJ_P0039597 Adamdec1 protein_coding protein_coding MGP_CBAJ_T0038634.1 MGP_CBAJ_G0020901.1 mouse_genomes_project 14 41352008 41361129 - MGP_CBAJ_P0038634 Ptgdr protein_coding protein_coding MGP_CBAJ_T0038188.1 MGP_CBAJ_G0020771.1 mouse_genomes_project 14 20351543 20366994 - MGP_CBAJ_P0038188 protein_coding protein_coding MGP_CBAJ_T0038195.1 MGP_CBAJ_G0020771.1 mouse_genomes_project 14 20352919 20366957 - MGP_CBAJ_P0038195 protein_coding protein_coding MGP_CBAJ_T0006579.1 MGP_CBAJ_G0005434.1 mouse_genomes_project 14 23311159 23314480 - Gm2670 lincRNA lincRNA MGP_CBAJ_T0002504.1 MGP_CBAJ_G0002409.1 mouse_genomes_project 14 52087800 52087861 + MGP_CBAJ_P0002504 Traj19 TR_J_gene TR_J_gene MGP_CBAJ_T0009895.1 MGP_CBAJ_G0008033.1 mouse_genomes_project 14 121366693 121366777 + Mir17 miRNA miRNA MGP_CBAJ_T0038589.1 MGP_CBAJ_G0020881.1 mouse_genomes_project 14 30334504 31181822 + MGP_CBAJ_P0038589 Grid1 protein_coding protein_coding MGP_CBAJ_T0038590.1 MGP_CBAJ_G0020881.1 mouse_genomes_project 14 31168421 31179554 + Grid1 protein_coding processed_transcript MGP_CBAJ_T0100127.1 MGP_CBAJ_G0038382.1 mouse_genomes_project 14 100034872 100035002 + Gm25133 snoRNA snoRNA MGP_CBAJ_T0098854.1 MGP_CBAJ_G0037109.1 mouse_genomes_project 14 75942174 75942281 - Gm23622 snRNA snRNA MGP_CBAJ_T0039779.1 MGP_CBAJ_G0021285.1 mouse_genomes_project 14 76163795 76170645 + MGP_CBAJ_P0039779 protein_coding protein_coding MGP_CBAJ_T0039780.1 MGP_CBAJ_G0021285.1 mouse_genomes_project 14 76164034 76164672 + protein_coding retained_intron MGP_CBAJ_T0039096.1 MGP_CBAJ_G0021040.1 mouse_genomes_project 14 52919035 52925143 - MGP_CBAJ_P0039096 Slc22a17 protein_coding protein_coding MGP_CBAJ_T0039628.1 MGP_CBAJ_G0021234.1 mouse_genomes_project 14 69361240 69383148 + MGP_CBAJ_P0039628 Tnfrsf10b protein_coding protein_coding MGP_CBAJ_T0039258.1 MGP_CBAJ_G0021078.1 mouse_genomes_project 14 53857336 53861750 - MGP_CBAJ_P0039258 Cideb protein_coding protein_coding MGP_CBAJ_T0039259.1 MGP_CBAJ_G0021078.1 mouse_genomes_project 14 53857949 53861671 - Cideb protein_coding retained_intron MGP_CBAJ_T0006560.1 MGP_CBAJ_G0005423.1 mouse_genomes_project 14 8626433 8641217 + B230110C06Rik lincRNA lincRNA MGP_CBAJ_T0006561.1 MGP_CBAJ_G0005423.1 mouse_genomes_project 14 8627002 8640679 + B230110C06Rik lincRNA lincRNA MGP_CBAJ_T0039835.1 MGP_CBAJ_G0021310.1 mouse_genomes_project 14 80275651 80394526 + MGP_CBAJ_P0039835 Elf1 protein_coding protein_coding MGP_CBAJ_T0039836.1 MGP_CBAJ_G0021310.1 mouse_genomes_project 14 80316473 80394525 + MGP_CBAJ_P0039836 Elf1 protein_coding protein_coding MGP_CBAJ_T0009868.1 MGP_CBAJ_G0008006.1 mouse_genomes_project 14 56195335 56195399 + Mir3077 miRNA miRNA MGP_CBAJ_T0100107.1 MGP_CBAJ_G0038362.1 mouse_genomes_project 14 55647014 55647134 - Gm23593 snoRNA snoRNA MGP_CBAJ_T0098157.1 MGP_CBAJ_G0036430.1 mouse_genomes_project 14 48067298 48067596 - Rpph1 ribozyme ribozyme MGP_CBAJ_T0039242.1 MGP_CBAJ_G0021070.1 mouse_genomes_project 14 53756319 53758948 - MGP_CBAJ_P0039242 Mdp1 protein_coding protein_coding MGP_CBAJ_T0038163.1 MGP_CBAJ_G0020764.1 mouse_genomes_project 14 18658788 18675177 + MGP_CBAJ_P0038163 E330034G19Rik protein_coding protein_coding MGP_CBAJ_T0038164.1 MGP_CBAJ_G0020764.1 mouse_genomes_project 14 18658810 18672503 + MGP_CBAJ_P0038164 E330034G19Rik protein_coding protein_coding MGP_CBAJ_T0038165.1 MGP_CBAJ_G0020764.1 mouse_genomes_project 14 18658858 18663858 + E330034G19Rik protein_coding retained_intron MGP_CBAJ_T0038166.1 MGP_CBAJ_G0020764.1 mouse_genomes_project 14 18658893 18675184 + MGP_CBAJ_P0038166 E330034G19Rik protein_coding protein_coding MGP_CBAJ_T0038167.1 MGP_CBAJ_G0020764.1 mouse_genomes_project 14 18658906 18663627 + MGP_CBAJ_P0038167 E330034G19Rik protein_coding protein_coding MGP_CBAJ_T0038168.1 MGP_CBAJ_G0020764.1 mouse_genomes_project 14 18658938 18675177 + MGP_CBAJ_P0038168 E330034G19Rik protein_coding protein_coding MGP_CBAJ_T0006617.1 MGP_CBAJ_G0005464.1 mouse_genomes_project 14 61786050 61787349 - Gm26536 lincRNA lincRNA MGP_CBAJ_T0002480.1 MGP_CBAJ_G0002385.1 mouse_genomes_project 14 52058239 52058300 + MGP_CBAJ_P0002480 Traj44 TR_J_gene TR_J_gene MGP_CBAJ_T0006562.1 MGP_CBAJ_G0005424.1 mouse_genomes_project 14 14664157 14679939 - 6230400D17Rik lincRNA lincRNA MGP_CBAJ_T0038657.1 MGP_CBAJ_G0020910.1 mouse_genomes_project 14 42245983 42313380 - MGP_CBAJ_P0038657 Ddhd1 protein_coding protein_coding MGP_CBAJ_T0038658.1 MGP_CBAJ_G0020910.1 mouse_genomes_project 14 42246294 42275080 - Ddhd1 protein_coding retained_intron MGP_CBAJ_T0038659.1 MGP_CBAJ_G0020910.1 mouse_genomes_project 14 42247464 42313335 - MGP_CBAJ_P0038659 Ddhd1 protein_coding protein_coding MGP_CBAJ_T0038660.1 MGP_CBAJ_G0020910.1 mouse_genomes_project 14 42247464 42313335 - MGP_CBAJ_P0038660 Ddhd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038661.1 MGP_CBAJ_G0020910.1 mouse_genomes_project 14 42247535 42276998 - Ddhd1 protein_coding retained_intron MGP_CBAJ_T0038662.1 MGP_CBAJ_G0020910.1 mouse_genomes_project 14 42247752 42255552 - MGP_CBAJ_P0038662 Ddhd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038663.1 MGP_CBAJ_G0020910.1 mouse_genomes_project 14 42248145 42274537 - MGP_CBAJ_P0038663 Ddhd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038664.1 MGP_CBAJ_G0020910.1 mouse_genomes_project 14 42248235 42313379 - MGP_CBAJ_P0038664 Ddhd1 protein_coding protein_coding MGP_CBAJ_T0038665.1 MGP_CBAJ_G0020910.1 mouse_genomes_project 14 42257835 42262190 - Ddhd1 protein_coding retained_intron MGP_CBAJ_T0038666.1 MGP_CBAJ_G0020910.1 mouse_genomes_project 14 42274462 42312638 - Ddhd1 protein_coding processed_transcript MGP_CBAJ_T0038667.1 MGP_CBAJ_G0020910.1 mouse_genomes_project 14 42282156 42312655 - Ddhd1 protein_coding retained_intron MGP_CBAJ_T0002602.1 MGP_CBAJ_G0002492.1 mouse_genomes_project 14 51736184 51736955 + MGP_CBAJ_P0002602 Trav21-dv12 TR_V_gene TR_V_gene MGP_CBAJ_T0012833.1 MGP_CBAJ_G0010945.1 mouse_genomes_project 14 42599386 42599765 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100105.1 MGP_CBAJ_G0038360.1 mouse_genomes_project 14 54385397 54385523 + Gm24118 snoRNA snoRNA MGP_CBAJ_T0039501.1 MGP_CBAJ_G0021185.1 mouse_genomes_project 14 64291611 64347287 - MGP_CBAJ_P0039501 Extl3 protein_coding protein_coding MGP_CBAJ_T0039394.1 MGP_CBAJ_G0021140.1 mouse_genomes_project 14 58918796 58977544 + MGP_CBAJ_P0039394 Mtmr6 protein_coding protein_coding MGP_CBAJ_T0098848.1 MGP_CBAJ_G0037103.1 mouse_genomes_project 14 55084031 55084090 - Gm22218 snRNA snRNA MGP_CBAJ_T0012870.1 MGP_CBAJ_G0010982.1 mouse_genomes_project 14 102516401 102517345 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0039276.1 MGP_CBAJ_G0021090.1 mouse_genomes_project 14 54189593 54192105 + MGP_CBAJ_P0039276 Mcpt2 protein_coding protein_coding MGP_CBAJ_T0000890.1 MGP_CBAJ_G0000825.1 mouse_genomes_project 14 89131214 89131590 - TEC TEC MGP_CBAJ_T0038626.1 MGP_CBAJ_G0020896.1 mouse_genomes_project 14 37329681 37348949 + MGP_CBAJ_P0038626 Dydc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038627.1 MGP_CBAJ_G0020896.1 mouse_genomes_project 14 37329681 37348956 + MGP_CBAJ_P0038627 Dydc1 protein_coding protein_coding MGP_CBAJ_T0038628.1 MGP_CBAJ_G0020896.1 mouse_genomes_project 14 37329710 37348952 + MGP_CBAJ_P0038628 Dydc1 protein_coding protein_coding MGP_CBAJ_T0038089.1 MGP_CBAJ_G0020754.1 mouse_genomes_project 14 15556822 15599686 + MGP_CBAJ_P0038089 Kat6b protein_coding protein_coding MGP_CBAJ_T0038090.1 MGP_CBAJ_G0020754.1 mouse_genomes_project 14 15556847 15708821 + Kat6b protein_coding processed_transcript MGP_CBAJ_T0038091.1 MGP_CBAJ_G0020754.1 mouse_genomes_project 14 15580037 15758394 + MGP_CBAJ_P0038091 Kat6b protein_coding protein_coding MGP_CBAJ_T0038092.1 MGP_CBAJ_G0020754.1 mouse_genomes_project 14 15580052 15758801 + MGP_CBAJ_P0038092 Kat6b protein_coding protein_coding MGP_CBAJ_T0038093.1 MGP_CBAJ_G0020754.1 mouse_genomes_project 14 15580121 15601218 + Kat6b protein_coding retained_intron MGP_CBAJ_T0038094.1 MGP_CBAJ_G0020754.1 mouse_genomes_project 14 15580125 15757196 + MGP_CBAJ_P0038094 Kat6b protein_coding unknown_likely_coding MGP_CBAJ_T0038095.1 MGP_CBAJ_G0020754.1 mouse_genomes_project 14 15580135 15758456 + MGP_CBAJ_P0038095 Kat6b protein_coding protein_coding MGP_CBAJ_T0038096.1 MGP_CBAJ_G0020754.1 mouse_genomes_project 14 15581120 15708241 + Kat6b protein_coding retained_intron MGP_CBAJ_T0038097.1 MGP_CBAJ_G0020754.1 mouse_genomes_project 14 15581152 15602878 + Kat6b protein_coding retained_intron MGP_CBAJ_T0038098.1 MGP_CBAJ_G0020754.1 mouse_genomes_project 14 15581156 15707445 + Kat6b protein_coding retained_intron MGP_CBAJ_T0038099.1 MGP_CBAJ_G0020754.1 mouse_genomes_project 14 15581159 15758801 + MGP_CBAJ_P0038099 Kat6b protein_coding protein_coding MGP_CBAJ_T0038100.1 MGP_CBAJ_G0020754.1 mouse_genomes_project 14 15599325 15757529 + MGP_CBAJ_P0038100 Kat6b protein_coding protein_coding MGP_CBAJ_T0038101.1 MGP_CBAJ_G0020754.1 mouse_genomes_project 14 15708804 15712378 + Kat6b protein_coding retained_intron MGP_CBAJ_T0038102.1 MGP_CBAJ_G0020754.1 mouse_genomes_project 14 15709384 15721414 + Kat6b protein_coding retained_intron MGP_CBAJ_T0039818.1 MGP_CBAJ_G0021300.1 mouse_genomes_project 14 79129999 79175448 - MGP_CBAJ_P0039818 Akap11 protein_coding protein_coding MGP_CBAJ_T0039819.1 MGP_CBAJ_G0021300.1 mouse_genomes_project 14 79129999 79175396 - MGP_CBAJ_P0039819 Akap11 protein_coding protein_coding MGP_CBAJ_T0002534.1 MGP_CBAJ_G0002437.1 mouse_genomes_project 14 52039690 52039761 + TR_J_pseudogene TR_J_pseudogene MGP_CBAJ_T0038130.1 MGP_CBAJ_G0020759.1 mouse_genomes_project 14 15959529 15961355 - MGP_CBAJ_P0038130 Comtd1 protein_coding protein_coding MGP_CBAJ_T0038131.1 MGP_CBAJ_G0020759.1 mouse_genomes_project 14 15959658 15961377 - Comtd1 protein_coding retained_intron MGP_CBAJ_T0038132.1 MGP_CBAJ_G0020759.1 mouse_genomes_project 14 15959664 15960290 - Comtd1 protein_coding retained_intron MGP_CBAJ_T0038592.1 MGP_CBAJ_G0020883.1 mouse_genomes_project 14 31763647 31767640 + MGP_CBAJ_P0038592 4930474N05Rik protein_coding protein_coding MGP_CBAJ_T0038593.1 MGP_CBAJ_G0020883.1 mouse_genomes_project 14 31763697 31771334 + MGP_CBAJ_P0038593 4930474N05Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0009857.1 MGP_CBAJ_G0007995.1 mouse_genomes_project 14 25592520 25592580 + Mir3076 miRNA miRNA MGP_CBAJ_T0003495.1 MGP_CBAJ_G0003177.1 mouse_genomes_project 14 68930737 68941736 - antisense antisense MGP_CBAJ_T0038557.1 MGP_CBAJ_G0020869.1 mouse_genomes_project 14 29572724 29581222 - MGP_CBAJ_P0038557 Npy4r protein_coding protein_coding MGP_CBAJ_T0098279.1 MGP_CBAJ_G0036548.1 mouse_genomes_project 14 18591988 18597173 - Gm17105 sense_intronic sense_intronic MGP_CBAJ_T0002489.1 MGP_CBAJ_G0002394.1 mouse_genomes_project 14 52069190 52069248 + MGP_CBAJ_P0002489 Traj34 TR_J_gene TR_J_gene MGP_CBAJ_T0100118.1 MGP_CBAJ_G0038373.1 mouse_genomes_project 14 76333216 76333350 - Gm25517 snoRNA snoRNA MGP_CBAJ_T0039785.1 MGP_CBAJ_G0021290.1 mouse_genomes_project 14 76835488 76946154 + MGP_CBAJ_P0039785 Tsc22d1 protein_coding protein_coding MGP_CBAJ_T0039786.1 MGP_CBAJ_G0021290.1 mouse_genomes_project 14 76836114 76946154 + MGP_CBAJ_P0039786 Tsc22d1 protein_coding protein_coding MGP_CBAJ_T0039787.1 MGP_CBAJ_G0021290.1 mouse_genomes_project 14 76836641 76837171 + Tsc22d1 protein_coding processed_transcript MGP_CBAJ_T0039788.1 MGP_CBAJ_G0021290.1 mouse_genomes_project 14 76838881 76862291 + MGP_CBAJ_P0039788 Tsc22d1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039789.1 MGP_CBAJ_G0021290.1 mouse_genomes_project 14 76839175 76859616 + MGP_CBAJ_P0039789 Tsc22d1 protein_coding protein_coding MGP_CBAJ_T0039790.1 MGP_CBAJ_G0021290.1 mouse_genomes_project 14 76839178 76860957 + MGP_CBAJ_P0039790 Tsc22d1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039791.1 MGP_CBAJ_G0021290.1 mouse_genomes_project 14 76839355 76861029 + MGP_CBAJ_P0039791 Tsc22d1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039792.1 MGP_CBAJ_G0021290.1 mouse_genomes_project 14 76858382 76860999 + Tsc22d1 protein_coding processed_transcript MGP_CBAJ_T0039793.1 MGP_CBAJ_G0021290.1 mouse_genomes_project 14 76859549 76860999 + Tsc22d1 protein_coding retained_intron MGP_CBAJ_T0039794.1 MGP_CBAJ_G0021290.1 mouse_genomes_project 14 76903142 76944085 + MGP_CBAJ_P0039794 Tsc22d1 protein_coding protein_coding MGP_CBAJ_T0039795.1 MGP_CBAJ_G0021290.1 mouse_genomes_project 14 76922549 76944153 + MGP_CBAJ_P0039795 Tsc22d1 protein_coding protein_coding MGP_CBAJ_T0039796.1 MGP_CBAJ_G0021290.1 mouse_genomes_project 14 76923226 76944325 + MGP_CBAJ_P0039796 Tsc22d1 protein_coding protein_coding MGP_CBAJ_T0039797.1 MGP_CBAJ_G0021290.1 mouse_genomes_project 14 76941368 76946155 + MGP_CBAJ_P0039797 Tsc22d1 protein_coding protein_coding MGP_CBAJ_T0039798.1 MGP_CBAJ_G0021290.1 mouse_genomes_project 14 76941632 76946157 + MGP_CBAJ_P0039798 Tsc22d1 protein_coding protein_coding MGP_CBAJ_T0039799.1 MGP_CBAJ_G0021290.1 mouse_genomes_project 14 76941684 76942892 + MGP_CBAJ_P0039799 Tsc22d1 protein_coding protein_coding MGP_CBAJ_T0039800.1 MGP_CBAJ_G0021290.1 mouse_genomes_project 14 76942252 76944157 + MGP_CBAJ_P0039800 Tsc22d1 protein_coding protein_coding MGP_CBAJ_T0002494.1 MGP_CBAJ_G0002399.1 mouse_genomes_project 14 52075299 52075359 + MGP_CBAJ_P0002494 Traj29 TR_J_gene TR_J_gene MGP_CBAJ_T0039444.1 MGP_CBAJ_G0021163.1 mouse_genomes_project 14 62047633 62051377 - MGP_CBAJ_P0039444 Defb30 protein_coding protein_coding MGP_CBAJ_T0039445.1 MGP_CBAJ_G0021163.1 mouse_genomes_project 14 62048033 62063548 - MGP_CBAJ_P0039445 Defb30 protein_coding protein_coding MGP_CBAJ_T0039446.1 MGP_CBAJ_G0021163.1 mouse_genomes_project 14 62049357 62063553 - MGP_CBAJ_P0039446 Defb30 protein_coding protein_coding MGP_CBAJ_T0039447.1 MGP_CBAJ_G0021163.1 mouse_genomes_project 14 62049443 62051390 - MGP_CBAJ_P0039447 Defb30 protein_coding protein_coding MGP_CBAJ_T0003510.1 MGP_CBAJ_G0003187.1 mouse_genomes_project 14 129079118 129080662 - 1810041H14Rik antisense antisense MGP_CBAJ_T0003511.1 MGP_CBAJ_G0003187.1 mouse_genomes_project 14 129079204 129080896 - 1810041H14Rik antisense antisense MGP_CBAJ_T0003512.1 MGP_CBAJ_G0003187.1 mouse_genomes_project 14 129079252 129081801 - 1810041H14Rik antisense antisense MGP_CBAJ_T0011252.1 MGP_CBAJ_G0009390.1 mouse_genomes_project 14 60484301 60484557 + Gm27928 misc_RNA misc_RNA MGP_CBAJ_T0039954.1 MGP_CBAJ_G0021349.1 mouse_genomes_project 14 110645515 110645920 - MGP_CBAJ_P0039954 Gm4775 protein_coding protein_coding MGP_CBAJ_T0038169.1 MGP_CBAJ_G0020765.1 mouse_genomes_project 14 18854189 18892576 - MGP_CBAJ_P0038169 Polr3a protein_coding protein_coding MGP_CBAJ_T0039511.1 MGP_CBAJ_G0021192.1 mouse_genomes_project 14 64979619 65091569 + MGP_CBAJ_P0039511 Scara5 protein_coding protein_coding MGP_CBAJ_T0039512.1 MGP_CBAJ_G0021192.1 mouse_genomes_project 14 64979653 65071854 + MGP_CBAJ_P0039512 Scara5 protein_coding protein_coding MGP_CBAJ_T0039513.1 MGP_CBAJ_G0021192.1 mouse_genomes_project 14 64990283 65071702 + Scara5 protein_coding processed_transcript MGP_CBAJ_T0040024.1 MGP_CBAJ_G0021384.1 mouse_genomes_project 14 129767623 129772041 + MGP_CBAJ_P0040024 Zic2 protein_coding protein_coding MGP_CBAJ_T0040025.1 MGP_CBAJ_G0021384.1 mouse_genomes_project 14 129770288 129771239 + Zic2 protein_coding retained_intron MGP_CBAJ_T0039437.1 MGP_CBAJ_G0021157.1 mouse_genomes_project 14 61601569 61632460 + MGP_CBAJ_P0039437 Serpine3 protein_coding protein_coding MGP_CBAJ_T0006601.1 MGP_CBAJ_G0005450.1 mouse_genomes_project 14 48673837 48677256 + lincRNA lincRNA MGP_CBAJ_T0012848.1 MGP_CBAJ_G0010960.1 mouse_genomes_project 14 52823381 52823811 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0039825.1 MGP_CBAJ_G0021304.1 mouse_genomes_project 14 80037724 80057774 - MGP_CBAJ_P0039825 Rgcc protein_coding protein_coding MGP_CBAJ_T0012829.1 MGP_CBAJ_G0010941.1 mouse_genomes_project 14 41423229 41432356 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012820.1 MGP_CBAJ_G0010932.1 mouse_genomes_project 14 20978373 20979212 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002512.1 MGP_CBAJ_G0002417.1 mouse_genomes_project 14 52096832 52096890 + MGP_CBAJ_P0002512 Traj9 TR_J_gene TR_J_gene MGP_CBAJ_T0038954.1 MGP_CBAJ_G0021003.1 mouse_genomes_project 14 49823031 49841380 + MGP_CBAJ_P0038954 Tox4 protein_coding protein_coding MGP_CBAJ_T0038955.1 MGP_CBAJ_G0021003.1 mouse_genomes_project 14 49823450 49837334 + Tox4 protein_coding retained_intron MGP_CBAJ_T0038956.1 MGP_CBAJ_G0021003.1 mouse_genomes_project 14 49823502 49823998 + Tox4 protein_coding retained_intron MGP_CBAJ_T0038957.1 MGP_CBAJ_G0021003.1 mouse_genomes_project 14 49823617 49833220 + Tox4 protein_coding retained_intron MGP_CBAJ_T0038958.1 MGP_CBAJ_G0021003.1 mouse_genomes_project 14 49831603 49832840 + Tox4 protein_coding processed_transcript MGP_CBAJ_T0009850.1 MGP_CBAJ_G0007988.1 mouse_genomes_project 14 16145937 16146050 - Gm27532 miRNA miRNA MGP_CBAJ_T0038813.1 MGP_CBAJ_G0020967.1 mouse_genomes_project 14 48162460 48163975 - MGP_CBAJ_P0038813 A930018M24Rik protein_coding protein_coding MGP_CBAJ_T0003481.1 MGP_CBAJ_G0003167.1 mouse_genomes_project 14 54809591 54822773 - Gm16573 antisense antisense MGP_CBAJ_T0003482.1 MGP_CBAJ_G0003167.1 mouse_genomes_project 14 54813118 54822789 - Gm16573 antisense antisense MGP_CBAJ_T0003483.1 MGP_CBAJ_G0003167.1 mouse_genomes_project 14 54819844 54822789 - Gm16573 antisense antisense MGP_CBAJ_T0038715.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44558440 44664960 + MGP_CBAJ_P0038715 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038716.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44559312 44664960 + MGP_CBAJ_P0038716 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038717.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44559317 44576347 + MGP_CBAJ_P0038717 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038718.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44559395 44664967 + MGP_CBAJ_P0038718 Ktn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038719.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44575787 44664966 + MGP_CBAJ_P0038719 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038720.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44575818 44664692 + MGP_CBAJ_P0038720 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038721.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44575818 44664696 + MGP_CBAJ_P0038721 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038722.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44575818 44664694 + MGP_CBAJ_P0038722 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038723.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44575818 44664694 + MGP_CBAJ_P0038723 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038724.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44575818 44664694 + MGP_CBAJ_P0038724 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038725.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44575818 44664694 + MGP_CBAJ_P0038725 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038726.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44575818 44664690 + MGP_CBAJ_P0038726 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038727.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44575818 44664682 + MGP_CBAJ_P0038727 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038728.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44575818 44664694 + MGP_CBAJ_P0038728 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038729.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44575818 44664687 + MGP_CBAJ_P0038729 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038730.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44575818 44664694 + MGP_CBAJ_P0038730 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038731.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44575818 44664694 + MGP_CBAJ_P0038731 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038732.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44575818 44664696 + MGP_CBAJ_P0038732 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038733.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44575818 44664691 + MGP_CBAJ_P0038733 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038734.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44575818 44664694 + MGP_CBAJ_P0038734 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038735.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44575818 44664694 + MGP_CBAJ_P0038735 Ktn1 protein_coding protein_coding MGP_CBAJ_T0038736.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44621962 44625708 + Ktn1 protein_coding retained_intron MGP_CBAJ_T0038737.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44626924 44636964 + Ktn1 protein_coding retained_intron MGP_CBAJ_T0038738.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44636164 44653309 + Ktn1 protein_coding retained_intron MGP_CBAJ_T0038739.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44653192 44654668 + Ktn1 protein_coding retained_intron MGP_CBAJ_T0038740.1 MGP_CBAJ_G0020926.1 mouse_genomes_project 14 44658083 44664964 + Ktn1 protein_coding retained_intron MGP_CBAJ_T0038778.1 MGP_CBAJ_G0020936.1 mouse_genomes_project 14 46990926 47000789 - MGP_CBAJ_P0038778 Olfr722 protein_coding protein_coding MGP_CBAJ_T0038741.1 MGP_CBAJ_G0020927.1 mouse_genomes_project 14 45108135 45258528 + MGP_CBAJ_P0038741 Peli2 protein_coding protein_coding MGP_CBAJ_T0039678.1 MGP_CBAJ_G0021253.1 mouse_genomes_project 14 70293733 70298458 + MGP_CBAJ_P0039678 Nudt18 protein_coding protein_coding MGP_CBAJ_T0100102.1 MGP_CBAJ_G0038357.1 mouse_genomes_project 14 49745972 49746082 - Snord8 snoRNA snoRNA MGP_CBAJ_T0006566.1 MGP_CBAJ_G0005427.1 mouse_genomes_project 14 19035936 19040056 + 4931403M11Rik lincRNA lincRNA MGP_CBAJ_T0038087.1 MGP_CBAJ_G0020753.1 mouse_genomes_project 14 15067776 15519319 + MGP_CBAJ_P0038087 Adk protein_coding protein_coding MGP_CBAJ_T0038088.1 MGP_CBAJ_G0020753.1 mouse_genomes_project 14 15093117 15519324 + MGP_CBAJ_P0038088 Adk protein_coding unknown_likely_coding MGP_CBAJ_T0039961.1 MGP_CBAJ_G0021355.1 mouse_genomes_project 14 121418843 121459101 + Gpc5 protein_coding retained_intron MGP_CBAJ_T0039962.1 MGP_CBAJ_G0021355.1 mouse_genomes_project 14 121418878 123058554 + MGP_CBAJ_P0039962 Gpc5 protein_coding protein_coding MGP_CBAJ_T0039963.1 MGP_CBAJ_G0021355.1 mouse_genomes_project 14 121418900 121800823 + MGP_CBAJ_P0039963 Gpc5 protein_coding protein_coding MGP_CBAJ_T0039964.1 MGP_CBAJ_G0021355.1 mouse_genomes_project 14 121419254 123057812 + MGP_CBAJ_P0039964 Gpc5 protein_coding protein_coding MGP_CBAJ_T0000875.1 MGP_CBAJ_G0000810.1 mouse_genomes_project 14 49797439 49804702 + TEC TEC MGP_CBAJ_T0012810.1 MGP_CBAJ_G0010922.1 mouse_genomes_project 14 12372248 12373419 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0039084.1 MGP_CBAJ_G0021037.1 mouse_genomes_project 14 52895654 52900489 + MGP_CBAJ_P0039084 Bcl2l2 protein_coding protein_coding MGP_CBAJ_T0039085.1 MGP_CBAJ_G0021037.1 mouse_genomes_project 14 52895658 52896335 + Bcl2l2 protein_coding retained_intron MGP_CBAJ_T0039087.1 MGP_CBAJ_G0021037.1 mouse_genomes_project 14 52895733 52897807 + MGP_CBAJ_P0039087 Bcl2l2 protein_coding protein_coding MGP_CBAJ_T0039088.1 MGP_CBAJ_G0021037.1 mouse_genomes_project 14 52895784 52900350 + MGP_CBAJ_P0039088 Bcl2l2 protein_coding protein_coding MGP_CBAJ_T0017129.1 MGP_CBAJ_G0015012.1 mouse_genomes_project 14 60406948 60502895 - Dleu2 processed_transcript lincRNA MGP_CBAJ_T0017130.1 MGP_CBAJ_G0015012.1 mouse_genomes_project 14 60407143 60502836 - Dleu2 processed_transcript lincRNA MGP_CBAJ_T0017131.1 MGP_CBAJ_G0015012.1 mouse_genomes_project 14 60407581 60502824 - Dleu2 processed_transcript lincRNA MGP_CBAJ_T0017132.1 MGP_CBAJ_G0015012.1 mouse_genomes_project 14 60407698 60466738 - Dleu2 processed_transcript lincRNA MGP_CBAJ_T0017133.1 MGP_CBAJ_G0015012.1 mouse_genomes_project 14 60407833 60466703 - Dleu2 processed_transcript lincRNA MGP_CBAJ_T0017134.1 MGP_CBAJ_G0015012.1 mouse_genomes_project 14 60429233 60430780 - Dleu2 processed_transcript TEC MGP_CBAJ_T0017135.1 MGP_CBAJ_G0015012.1 mouse_genomes_project 14 60430501 60502847 - Dleu2 processed_transcript lincRNA MGP_CBAJ_T0017136.1 MGP_CBAJ_G0015012.1 mouse_genomes_project 14 60436211 60466678 - Dleu2 processed_transcript lincRNA MGP_CBAJ_T0017137.1 MGP_CBAJ_G0015012.1 mouse_genomes_project 14 60438838 60444305 - Dleu2 processed_transcript TEC MGP_CBAJ_T0017138.1 MGP_CBAJ_G0015012.1 mouse_genomes_project 14 60439634 60502847 - Dleu2 processed_transcript lincRNA MGP_CBAJ_T0017139.1 MGP_CBAJ_G0015012.1 mouse_genomes_project 14 60444711 60466538 - Dleu2 processed_transcript lincRNA MGP_CBAJ_T0017140.1 MGP_CBAJ_G0015012.1 mouse_genomes_project 14 60444761 60466738 - Dleu2 processed_transcript lincRNA MGP_CBAJ_T0017141.1 MGP_CBAJ_G0015012.1 mouse_genomes_project 14 60447639 60502836 - Dleu2 processed_transcript lincRNA MGP_CBAJ_T0017142.1 MGP_CBAJ_G0015012.1 mouse_genomes_project 14 60459167 60502835 - Dleu2 processed_transcript lincRNA MGP_CBAJ_T0017143.1 MGP_CBAJ_G0015012.1 mouse_genomes_project 14 60459241 60502847 - Dleu2 processed_transcript lincRNA MGP_CBAJ_T0038458.1 MGP_CBAJ_G0020837.1 mouse_genomes_project 14 27240602 27279000 + MGP_CBAJ_P0038458 Galnt15 protein_coding protein_coding MGP_CBAJ_T0038459.1 MGP_CBAJ_G0020837.1 mouse_genomes_project 14 27241023 27277030 + MGP_CBAJ_P0038459 Galnt15 protein_coding protein_coding MGP_CBAJ_T0039433.1 MGP_CBAJ_G0021156.1 mouse_genomes_project 14 61483348 61522164 + Fam124a protein_coding processed_transcript MGP_CBAJ_T0039434.1 MGP_CBAJ_G0021156.1 mouse_genomes_project 14 61483348 61539524 + Fam124a protein_coding processed_transcript MGP_CBAJ_T0039435.1 MGP_CBAJ_G0021156.1 mouse_genomes_project 14 61483348 61541980 + MGP_CBAJ_P0039435 Fam124a protein_coding protein_coding MGP_CBAJ_T0039436.1 MGP_CBAJ_G0021156.1 mouse_genomes_project 14 61483386 61492651 + Fam124a protein_coding processed_transcript MGP_CBAJ_T0038514.1 MGP_CBAJ_G0020851.1 mouse_genomes_project 14 27950332 27981399 - MGP_CBAJ_P0038514 3425401B19Rik protein_coding protein_coding MGP_CBAJ_T0038479.1 MGP_CBAJ_G0020840.1 mouse_genomes_project 14 27375272 27391602 + MGP_CBAJ_P0038479 Msmb protein_coding protein_coding MGP_CBAJ_T0038480.1 MGP_CBAJ_G0020840.1 mouse_genomes_project 14 27380833 27391602 + MGP_CBAJ_P0038480 Msmb protein_coding protein_coding MGP_CBAJ_T0038788.1 MGP_CBAJ_G0020946.1 mouse_genomes_project 14 47449088 47450132 - MGP_CBAJ_P0038788 Olfr732 protein_coding protein_coding MGP_CBAJ_T0038123.1 MGP_CBAJ_G0020758.1 mouse_genomes_project 14 15940937 15950069 + MGP_CBAJ_P0038123 Vdac2 protein_coding protein_coding MGP_CBAJ_T0038124.1 MGP_CBAJ_G0020758.1 mouse_genomes_project 14 15941177 15958360 + MGP_CBAJ_P0038124 Vdac2 protein_coding protein_coding MGP_CBAJ_T0038125.1 MGP_CBAJ_G0020758.1 mouse_genomes_project 14 15941392 15947493 + MGP_CBAJ_P0038125 Vdac2 protein_coding protein_coding MGP_CBAJ_T0038126.1 MGP_CBAJ_G0020758.1 mouse_genomes_project 14 15943302 15947687 + Vdac2 protein_coding processed_transcript MGP_CBAJ_T0038127.1 MGP_CBAJ_G0020758.1 mouse_genomes_project 14 15947409 15950177 + Vdac2 protein_coding retained_intron MGP_CBAJ_T0038128.1 MGP_CBAJ_G0020758.1 mouse_genomes_project 14 15947506 15948523 + Vdac2 protein_coding retained_intron MGP_CBAJ_T0038129.1 MGP_CBAJ_G0020758.1 mouse_genomes_project 14 15951902 15957999 + Vdac2 protein_coding retained_intron MGP_CBAJ_T0039270.1 MGP_CBAJ_G0021085.1 mouse_genomes_project 14 54001137 54006474 - MGP_CBAJ_P0039270 Cbln3 protein_coding protein_coding MGP_CBAJ_T0039271.1 MGP_CBAJ_G0021085.1 mouse_genomes_project 14 54004278 54006450 - MGP_CBAJ_P0039271 Cbln3 protein_coding protein_coding MGP_CBAJ_T0000878.1 MGP_CBAJ_G0000813.1 mouse_genomes_project 14 53127258 53129440 - TEC TEC MGP_CBAJ_T0038180.1 MGP_CBAJ_G0020768.1 mouse_genomes_project 14 20144979 20151292 + Ppif protein_coding retained_intron MGP_CBAJ_T0038181.1 MGP_CBAJ_G0020768.1 mouse_genomes_project 14 20144995 20151296 + MGP_CBAJ_P0038181 Ppif protein_coding protein_coding MGP_CBAJ_T0100128.1 MGP_CBAJ_G0038383.1 mouse_genomes_project 14 100472252 100472344 + Gm24770 snoRNA snoRNA MGP_CBAJ_T0012834.1 MGP_CBAJ_G0010946.1 mouse_genomes_project 14 42719302 42720657 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0037961.1 MGP_CBAJ_G0020711.1 mouse_genomes_project 14 7403739 7404839 + MGP_CBAJ_P0037961 Olfr721-ps1 protein_coding protein_coding MGP_CBAJ_T0037962.1 MGP_CBAJ_G0020711.1 mouse_genomes_project 14 7403864 7404839 + MGP_CBAJ_P0037962 Olfr721-ps1 protein_coding protein_coding MGP_CBAJ_T0009882.1 MGP_CBAJ_G0008020.1 mouse_genomes_project 14 70145925 70146007 + Mir320 miRNA miRNA MGP_CBAJ_T0039303.1 MGP_CBAJ_G0021108.1 mouse_genomes_project 14 55004854 55035619 - MGP_CBAJ_P0039303 Zmym5 protein_coding protein_coding MGP_CBAJ_T0098841.1 MGP_CBAJ_G0037096.1 mouse_genomes_project 14 46885469 46885555 + Gm22989 snRNA snRNA MGP_CBAJ_T0039534.1 MGP_CBAJ_G0021200.1 mouse_genomes_project 14 65468926 65510558 - MGP_CBAJ_P0039534 Ephx2 protein_coding protein_coding MGP_CBAJ_T0006631.1 MGP_CBAJ_G0005473.1 mouse_genomes_project 14 80656220 80802131 + Gm6999 lincRNA lincRNA MGP_CBAJ_T0006611.1 MGP_CBAJ_G0005459.1 mouse_genomes_project 14 60436954 60438366 - Gm27010 lincRNA lincRNA MGP_CBAJ_T0038076.1 MGP_CBAJ_G0020750.1 mouse_genomes_project 14 14831169 14837882 + MGP_CBAJ_P0038076 Plau protein_coding protein_coding MGP_CBAJ_T0009890.1 MGP_CBAJ_G0008028.1 mouse_genomes_project 14 107195143 107195227 - Mir5130 miRNA miRNA MGP_CBAJ_T0003479.1 MGP_CBAJ_G0003165.1 mouse_genomes_project 14 53117609 53120397 + Zfhx2os antisense antisense MGP_CBAJ_T0000896.1 MGP_CBAJ_G0000831.1 mouse_genomes_project 14 123307791 123308706 + TEC TEC MGP_CBAJ_T0006580.1 MGP_CBAJ_G0005435.1 mouse_genomes_project 14 27094993 27119894 + D830044D21Rik lincRNA lincRNA MGP_CBAJ_T0039246.1 MGP_CBAJ_G0021073.1 mouse_genomes_project 14 53779283 53782018 - MGP_CBAJ_P0039246 Tinf2 protein_coding protein_coding MGP_CBAJ_T0038649.1 MGP_CBAJ_G0020905.1 mouse_genomes_project 14 41881159 41928418 - MGP_CBAJ_P0038649 Ero1l protein_coding protein_coding MGP_CBAJ_T0003465.1 MGP_CBAJ_G0003153.1 mouse_genomes_project 14 34917510 34990476 + Nrg3os antisense antisense MGP_CBAJ_T0039706.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73096654 73113130 + Rcbtb2 protein_coding retained_intron MGP_CBAJ_T0039707.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73096654 73124208 + MGP_CBAJ_P0039707 Rcbtb2 protein_coding protein_coding MGP_CBAJ_T0039708.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73100412 73126597 + MGP_CBAJ_P0039708 Rcbtb2 protein_coding protein_coding MGP_CBAJ_T0039709.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73100434 73128426 + MGP_CBAJ_P0039709 Rcbtb2 protein_coding protein_coding MGP_CBAJ_T0039710.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73100583 73113129 + Rcbtb2 protein_coding retained_intron MGP_CBAJ_T0039711.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73100599 73124259 + MGP_CBAJ_P0039711 Rcbtb2 protein_coding protein_coding MGP_CBAJ_T0039712.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73100739 73162243 + MGP_CBAJ_P0039712 Rcbtb2 protein_coding protein_coding MGP_CBAJ_T0039713.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73100868 73126661 + MGP_CBAJ_P0039713 Rcbtb2 protein_coding protein_coding MGP_CBAJ_T0039714.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73100885 73125955 + Rcbtb2 protein_coding retained_intron MGP_CBAJ_T0039715.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73100893 73112700 + Rcbtb2 protein_coding retained_intron MGP_CBAJ_T0039716.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73100938 73145951 + MGP_CBAJ_P0039716 Rcbtb2 protein_coding protein_coding MGP_CBAJ_T0039717.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73100952 73145066 + MGP_CBAJ_P0039717 Rcbtb2 protein_coding protein_coding MGP_CBAJ_T0039718.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73100975 73146122 + MGP_CBAJ_P0039718 Rcbtb2 protein_coding protein_coding MGP_CBAJ_T0039719.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73100986 73113083 + Rcbtb2 protein_coding retained_intron MGP_CBAJ_T0039720.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73100986 73128759 + MGP_CBAJ_P0039720 Rcbtb2 protein_coding protein_coding MGP_CBAJ_T0039721.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73101033 73126728 + MGP_CBAJ_P0039721 Rcbtb2 protein_coding protein_coding MGP_CBAJ_T0039722.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73101050 73145601 + MGP_CBAJ_P0039722 Rcbtb2 protein_coding protein_coding MGP_CBAJ_T0039723.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73101276 73123839 + MGP_CBAJ_P0039723 Rcbtb2 protein_coding protein_coding MGP_CBAJ_T0039724.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73123809 73144506 + MGP_CBAJ_P0039724 Rcbtb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039725.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73123809 73144503 + MGP_CBAJ_P0039725 Rcbtb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039726.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73135797 73144422 + MGP_CBAJ_P0039726 Rcbtb2 protein_coding protein_coding MGP_CBAJ_T0039727.1 MGP_CBAJ_G0021264.1 mouse_genomes_project 14 73136358 73144586 + Rcbtb2 protein_coding retained_intron MGP_CBAJ_T0000881.1 MGP_CBAJ_G0000816.1 mouse_genomes_project 14 60497968 60502020 - TEC TEC MGP_CBAJ_T0038803.1 MGP_CBAJ_G0020958.1 mouse_genomes_project 14 47878093 47879266 + MGP_CBAJ_P0038803 Olfr745 protein_coding protein_coding MGP_CBAJ_T0039680.1 MGP_CBAJ_G0021255.1 mouse_genomes_project 14 70322970 70355679 - MGP_CBAJ_P0039680 Dmtn protein_coding protein_coding MGP_CBAJ_T0039681.1 MGP_CBAJ_G0021255.1 mouse_genomes_project 14 70322971 70352590 - MGP_CBAJ_P0039681 Dmtn protein_coding protein_coding MGP_CBAJ_T0039682.1 MGP_CBAJ_G0021255.1 mouse_genomes_project 14 70325527 70354515 - MGP_CBAJ_P0039682 Dmtn protein_coding unknown_likely_coding MGP_CBAJ_T0038807.1 MGP_CBAJ_G0020962.1 mouse_genomes_project 14 48009089 48034290 - MGP_CBAJ_P0038807 Ttc5 protein_coding protein_coding MGP_CBAJ_T0039139.1 MGP_CBAJ_G0021054.1 mouse_genomes_project 14 53569879 53587033 + MGP_CBAJ_P0039139 Lrrc16b protein_coding protein_coding MGP_CBAJ_T0039140.1 MGP_CBAJ_G0021054.1 mouse_genomes_project 14 53570030 53587058 + MGP_CBAJ_P0039140 Lrrc16b protein_coding unknown_likely_coding MGP_CBAJ_T0038583.1 MGP_CBAJ_G0020880.1 mouse_genomes_project 14 30186206 30264355 + MGP_CBAJ_P0038583 Wapl protein_coding protein_coding MGP_CBAJ_T0038584.1 MGP_CBAJ_G0020880.1 mouse_genomes_project 14 30186242 30262224 + MGP_CBAJ_P0038584 Wapl protein_coding protein_coding MGP_CBAJ_T0038585.1 MGP_CBAJ_G0020880.1 mouse_genomes_project 14 30186400 30262319 + MGP_CBAJ_P0038585 Wapl protein_coding protein_coding MGP_CBAJ_T0038586.1 MGP_CBAJ_G0020880.1 mouse_genomes_project 14 30211687 30262584 + Wapl protein_coding processed_transcript MGP_CBAJ_T0038587.1 MGP_CBAJ_G0020880.1 mouse_genomes_project 14 30242474 30262586 + MGP_CBAJ_P0038587 Wapl protein_coding protein_coding MGP_CBAJ_T0038588.1 MGP_CBAJ_G0020880.1 mouse_genomes_project 14 30253231 30257514 + MGP_CBAJ_P0038588 Wapl protein_coding protein_coding MGP_CBAJ_T0097946.1 MGP_CBAJ_G0036219.1 mouse_genomes_project 14 5151689 5151799 - n-R5s45 rRNA rRNA MGP_CBAJ_T0038852.1 MGP_CBAJ_G0020983.1 mouse_genomes_project 14 48432060 48432819 + MGP_CBAJ_P0038852 Rnase2b protein_coding protein_coding MGP_CBAJ_T0038315.1 MGP_CBAJ_G0020809.1 mouse_genomes_project 14 25760125 25871008 + MGP_CBAJ_P0038315 Sfmbt1 protein_coding protein_coding MGP_CBAJ_T0038316.1 MGP_CBAJ_G0020809.1 mouse_genomes_project 14 25760443 25868129 + MGP_CBAJ_P0038316 Sfmbt1 protein_coding protein_coding MGP_CBAJ_T0038317.1 MGP_CBAJ_G0020809.1 mouse_genomes_project 14 25760783 25875762 + MGP_CBAJ_P0038317 Sfmbt1 protein_coding protein_coding MGP_CBAJ_T0038318.1 MGP_CBAJ_G0020809.1 mouse_genomes_project 14 25761021 25854989 + MGP_CBAJ_P0038318 Sfmbt1 protein_coding unknown_likely_coding MGP_CBAJ_T0038319.1 MGP_CBAJ_G0020809.1 mouse_genomes_project 14 25761665 25871391 + MGP_CBAJ_P0038319 Sfmbt1 protein_coding protein_coding MGP_CBAJ_T0038320.1 MGP_CBAJ_G0020809.1 mouse_genomes_project 14 25828026 25871390 + MGP_CBAJ_P0038320 Sfmbt1 protein_coding protein_coding MGP_CBAJ_T0038321.1 MGP_CBAJ_G0020809.1 mouse_genomes_project 14 25848656 25850412 + Sfmbt1 protein_coding retained_intron MGP_CBAJ_T0002654.1 MGP_CBAJ_G0002534.1 mouse_genomes_project 14 51069762 51072613 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0038424.1 MGP_CBAJ_G0020828.1 mouse_genomes_project 14 26376645 26439934 - MGP_CBAJ_P0038424 Dnah1 protein_coding protein_coding MGP_CBAJ_T0002661.1 MGP_CBAJ_G0002541.1 mouse_genomes_project 14 51861888 51862191 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0038019.1 MGP_CBAJ_G0020727.1 mouse_genomes_project 14 13662786 13679360 - MGP_CBAJ_P0038019 2700060E02Rik protein_coding protein_coding MGP_CBAJ_T0038077.1 MGP_CBAJ_G0020751.1 mouse_genomes_project 14 14937189 15048880 + MGP_CBAJ_P0038077 Vcl protein_coding protein_coding MGP_CBAJ_T0039487.1 MGP_CBAJ_G0021181.1 mouse_genomes_project 14 63287550 63643381 - MGP_CBAJ_P0039487 Msra protein_coding protein_coding MGP_CBAJ_T0039973.1 MGP_CBAJ_G0021361.1 mouse_genomes_project 14 124958528 124959895 + MGP_CBAJ_P0039973 Gm9376 protein_coding protein_coding MGP_CBAJ_T0039781.1 MGP_CBAJ_G0021286.1 mouse_genomes_project 14 76246379 76377387 - MGP_CBAJ_P0039781 Gtf2f2 protein_coding protein_coding MGP_CBAJ_T0017147.1 MGP_CBAJ_G0015014.1 mouse_genomes_project 14 66761771 66762463 - Gm20675 processed_transcript processed_transcript MGP_CBAJ_T0039958.1 MGP_CBAJ_G0021352.1 mouse_genomes_project 14 115897077 115897957 + MGP_CBAJ_P0039958 protein_coding protein_coding MGP_CBAJ_T0011246.1 MGP_CBAJ_G0009384.1 mouse_genomes_project 14 42103013 42103296 - Gm22637 misc_RNA misc_RNA MGP_CBAJ_T0101639.1 MGP_CBAJ_G0039670.1 mouse_genomes_project 14 48374279 48374714 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0037937.1 MGP_CBAJ_G0020700.1 mouse_genomes_project 14 5065706 5069677 - MGP_CBAJ_P0037937 Fezf2 protein_coding protein_coding MGP_CBAJ_T0002450.1 MGP_CBAJ_G0002362.1 mouse_genomes_project 14 52108478 52111073 + MGP_CBAJ_P0002450 Trac TR_C_gene TR_C_gene MGP_CBAJ_T0002451.1 MGP_CBAJ_G0002362.1 mouse_genomes_project 14 52108478 52112158 + MGP_CBAJ_P0002451 Trac TR_C_gene TR_C_gene MGP_CBAJ_T0098849.1 MGP_CBAJ_G0037104.1 mouse_genomes_project 14 56230780 56230927 - Gm22738 snRNA snRNA MGP_CBAJ_T0038880.1 MGP_CBAJ_G0020992.1 mouse_genomes_project 14 49423938 49426490 + MGP_CBAJ_P0038880 Tppp2 protein_coding protein_coding MGP_CBAJ_T0038881.1 MGP_CBAJ_G0020992.1 mouse_genomes_project 14 49424559 49426490 + MGP_CBAJ_P0038881 Tppp2 protein_coding protein_coding MGP_CBAJ_T0039275.1 MGP_CBAJ_G0021089.1 mouse_genomes_project 14 54164416 54166844 + MGP_CBAJ_P0039275 Mcpt1 protein_coding protein_coding MGP_CBAJ_T0100121.1 MGP_CBAJ_G0038376.1 mouse_genomes_project 14 89289085 89289228 + Gm23278 snoRNA snoRNA MGP_CBAJ_T0038804.1 MGP_CBAJ_G0020959.1 mouse_genomes_project 14 47892371 47893516 + MGP_CBAJ_P0038804 Olfr746 protein_coding protein_coding MGP_CBAJ_T0039075.1 MGP_CBAJ_G0021034.1 mouse_genomes_project 14 52693201 52769174 - MGP_CBAJ_P0039075 Slc7a8 protein_coding protein_coding MGP_CBAJ_T0006578.1 MGP_CBAJ_G0005433.1 mouse_genomes_project 14 20973699 20998663 + lincRNA lincRNA MGP_CBAJ_T0038610.1 MGP_CBAJ_G0020890.1 mouse_genomes_project 14 32904769 32919465 - MGP_CBAJ_P0038610 Ghitm protein_coding protein_coding MGP_CBAJ_T0038611.1 MGP_CBAJ_G0020890.1 mouse_genomes_project 14 32904769 32919648 - MGP_CBAJ_P0038611 Ghitm protein_coding protein_coding MGP_CBAJ_T0009896.1 MGP_CBAJ_G0008034.1 mouse_genomes_project 14 121366873 121366969 + Mir18 miRNA miRNA MGP_CBAJ_T0012849.1 MGP_CBAJ_G0010961.1 mouse_genomes_project 14 53489730 53490299 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017127.1 MGP_CBAJ_G0015011.1 mouse_genomes_project 14 41503096 41509188 - 4930431P03Rik processed_transcript retained_intron MGP_CBAJ_T0017128.1 MGP_CBAJ_G0015011.1 mouse_genomes_project 14 41504300 41509188 - 4930431P03Rik processed_transcript antisense MGP_CBAJ_T0040038.1 MGP_CBAJ_G0021387.1 mouse_genomes_project 14 130132410 130244769 - MGP_CBAJ_P0040038 Ggact protein_coding protein_coding MGP_CBAJ_T0040041.1 MGP_CBAJ_G0021387.1 mouse_genomes_project 14 130221936 130244811 - MGP_CBAJ_P0040041 Ggact protein_coding protein_coding MGP_CBAJ_T0040042.1 MGP_CBAJ_G0021387.1 mouse_genomes_project 14 130221947 130222774 - MGP_CBAJ_P0040042 Ggact protein_coding protein_coding MGP_CBAJ_T0040043.1 MGP_CBAJ_G0021387.1 mouse_genomes_project 14 130222503 130245406 - MGP_CBAJ_P0040043 Ggact protein_coding protein_coding MGP_CBAJ_T0040044.1 MGP_CBAJ_G0021387.1 mouse_genomes_project 14 130222552 130244734 - MGP_CBAJ_P0040044 Ggact protein_coding protein_coding MGP_CBAJ_T0003470.1 MGP_CBAJ_G0003158.1 mouse_genomes_project 14 51782876 51809541 - antisense antisense MGP_CBAJ_T0039666.1 MGP_CBAJ_G0021247.1 mouse_genomes_project 14 70161867 70173160 + MGP_CBAJ_P0039666 Phyhip protein_coding protein_coding MGP_CBAJ_T0039667.1 MGP_CBAJ_G0021247.1 mouse_genomes_project 14 70162914 70167672 + MGP_CBAJ_P0039667 Phyhip protein_coding protein_coding MGP_CBAJ_T0038981.1 MGP_CBAJ_G0021010.1 mouse_genomes_project 14 50023378 50035145 + MGP_CBAJ_P0038981 Olfr1509 protein_coding protein_coding MGP_CBAJ_T0038982.1 MGP_CBAJ_G0021010.1 mouse_genomes_project 14 50023379 50034534 + MGP_CBAJ_P0038982 Olfr1509 protein_coding protein_coding MGP_CBAJ_T0038983.1 MGP_CBAJ_G0021010.1 mouse_genomes_project 14 50023414 50034368 + MGP_CBAJ_P0038983 Olfr1509 protein_coding protein_coding MGP_CBAJ_T0038984.1 MGP_CBAJ_G0021010.1 mouse_genomes_project 14 50033090 50034627 + MGP_CBAJ_P0038984 Olfr1509 protein_coding protein_coding MGP_CBAJ_T0038985.1 MGP_CBAJ_G0021010.1 mouse_genomes_project 14 50034135 50035145 + MGP_CBAJ_P0038985 Olfr1509 protein_coding protein_coding MGP_CBAJ_T0100106.1 MGP_CBAJ_G0038361.1 mouse_genomes_project 14 55063638 55063724 - Gm22498 snoRNA snoRNA MGP_CBAJ_T0039042.1 MGP_CBAJ_G0021026.1 mouse_genomes_project 14 52552575 52556465 - MGP_CBAJ_P0039042 Psmb5 protein_coding protein_coding MGP_CBAJ_T0003443.1 MGP_CBAJ_G0003138.1 mouse_genomes_project 14 14340012 14340584 + 7330404K18Rik antisense antisense MGP_CBAJ_T0003466.1 MGP_CBAJ_G0003154.1 mouse_genomes_project 14 35296179 35330058 + Gm20642 antisense antisense MGP_CBAJ_T0009878.1 MGP_CBAJ_G0008016.1 mouse_genomes_project 14 66810249 66810344 - Gm23178 miRNA miRNA MGP_CBAJ_T0038617.1 MGP_CBAJ_G0020893.1 mouse_genomes_project 14 37143810 37207197 - MGP_CBAJ_P0038617 Tspan14 protein_coding protein_coding MGP_CBAJ_T0039080.1 MGP_CBAJ_G0021036.1 mouse_genomes_project 14 52879710 52880318 - Ppp1r3e protein_coding processed_transcript MGP_CBAJ_T0039081.1 MGP_CBAJ_G0021036.1 mouse_genomes_project 14 52879710 52884614 - MGP_CBAJ_P0039081 Ppp1r3e protein_coding protein_coding MGP_CBAJ_T0039082.1 MGP_CBAJ_G0021036.1 mouse_genomes_project 14 52882658 52883685 - Ppp1r3e protein_coding TEC MGP_CBAJ_T0039083.1 MGP_CBAJ_G0021036.1 mouse_genomes_project 14 52882658 52884602 - MGP_CBAJ_P0039083 Ppp1r3e protein_coding protein_coding MGP_CBAJ_T0039226.1 MGP_CBAJ_G0021068.1 mouse_genomes_project 14 53728555 53735842 - MGP_CBAJ_P0039226 Tm9sf1 protein_coding protein_coding MGP_CBAJ_T0039227.1 MGP_CBAJ_G0021068.1 mouse_genomes_project 14 53728555 53736397 - MGP_CBAJ_P0039227 Tm9sf1 protein_coding protein_coding MGP_CBAJ_T0039228.1 MGP_CBAJ_G0021068.1 mouse_genomes_project 14 53728558 53735906 - MGP_CBAJ_P0039228 Tm9sf1 protein_coding protein_coding MGP_CBAJ_T0039229.1 MGP_CBAJ_G0021068.1 mouse_genomes_project 14 53728602 53735945 - MGP_CBAJ_P0039229 Tm9sf1 protein_coding protein_coding MGP_CBAJ_T0039230.1 MGP_CBAJ_G0021068.1 mouse_genomes_project 14 53728606 53735952 - MGP_CBAJ_P0039230 Tm9sf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039231.1 MGP_CBAJ_G0021068.1 mouse_genomes_project 14 53728650 53735931 - MGP_CBAJ_P0039231 Tm9sf1 protein_coding protein_coding MGP_CBAJ_T0039232.1 MGP_CBAJ_G0021068.1 mouse_genomes_project 14 53730423 53736114 - MGP_CBAJ_P0039232 Tm9sf1 protein_coding protein_coding MGP_CBAJ_T0039233.1 MGP_CBAJ_G0021068.1 mouse_genomes_project 14 53730891 53733651 - Tm9sf1 protein_coding processed_transcript MGP_CBAJ_T0039234.1 MGP_CBAJ_G0021068.1 mouse_genomes_project 14 53732686 53735962 - Tm9sf1 protein_coding retained_intron MGP_CBAJ_T0039235.1 MGP_CBAJ_G0021068.1 mouse_genomes_project 14 53732975 53736151 - Tm9sf1 protein_coding processed_transcript MGP_CBAJ_T0039236.1 MGP_CBAJ_G0021068.1 mouse_genomes_project 14 53733034 53734190 - Tm9sf1 protein_coding retained_intron MGP_CBAJ_T0039237.1 MGP_CBAJ_G0021068.1 mouse_genomes_project 14 53734008 53736362 - MGP_CBAJ_P0039237 Tm9sf1 protein_coding protein_coding MGP_CBAJ_T0039238.1 MGP_CBAJ_G0021068.1 mouse_genomes_project 14 53735174 53735924 - MGP_CBAJ_P0039238 Tm9sf1 protein_coding protein_coding MGP_CBAJ_T0012869.1 MGP_CBAJ_G0010981.1 mouse_genomes_project 14 101828102 101828596 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0038762.1 MGP_CBAJ_G0020931.1 mouse_genomes_project 14 46163589 46184237 + MGP_CBAJ_P0038762 Ap5m1 protein_coding protein_coding MGP_CBAJ_T0098875.1 MGP_CBAJ_G0037130.1 mouse_genomes_project 14 125311039 125311139 + Gm23302 snRNA snRNA MGP_CBAJ_T0039610.1 MGP_CBAJ_G0021230.1 mouse_genomes_project 14 69119392 69152660 + MGP_CBAJ_P0039610 Gm21685 protein_coding unknown_likely_coding MGP_CBAJ_T0039614.1 MGP_CBAJ_G0021230.1 mouse_genomes_project 14 69133696 69151706 + MGP_CBAJ_P0039614 Gm21685 protein_coding protein_coding MGP_CBAJ_T0011251.1 MGP_CBAJ_G0009389.1 mouse_genomes_project 14 60466553 60466690 + Gm27972 misc_RNA misc_RNA MGP_CBAJ_T0000885.1 MGP_CBAJ_G0000820.1 mouse_genomes_project 14 68985417 68988978 - TEC TEC MGP_CBAJ_T0039272.1 MGP_CBAJ_G0021086.1 mouse_genomes_project 14 54007186 54019013 + MGP_CBAJ_P0039272 Khnyn protein_coding protein_coding MGP_CBAJ_T0039039.1 MGP_CBAJ_G0021023.1 mouse_genomes_project 14 52470881 52489426 - MGP_CBAJ_P0039039 Haus4 protein_coding protein_coding MGP_CBAJ_T0039598.1 MGP_CBAJ_G0021221.1 mouse_genomes_project 14 68283381 68335641 - MGP_CBAJ_P0039598 Adam28 protein_coding protein_coding MGP_CBAJ_T0039599.1 MGP_CBAJ_G0021221.1 mouse_genomes_project 14 68284233 68335641 - MGP_CBAJ_P0039599 Adam28 protein_coding protein_coding MGP_CBAJ_T0100111.1 MGP_CBAJ_G0038366.1 mouse_genomes_project 14 61606482 61606641 + Gm25162 snoRNA snoRNA MGP_CBAJ_T0012847.1 MGP_CBAJ_G0010959.1 mouse_genomes_project 14 52227439 52228123 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097955.1 MGP_CBAJ_G0036228.1 mouse_genomes_project 14 90088183 90088283 + Gm26405 rRNA rRNA MGP_CBAJ_T0039838.1 MGP_CBAJ_G0021312.1 mouse_genomes_project 14 80454745 80479107 - MGP_CBAJ_P0039838 Lect1 protein_coding protein_coding MGP_CBAJ_T0039839.1 MGP_CBAJ_G0021312.1 mouse_genomes_project 14 80454748 80479193 - MGP_CBAJ_P0039839 Lect1 protein_coding protein_coding MGP_CBAJ_T0039840.1 MGP_CBAJ_G0021312.1 mouse_genomes_project 14 80454871 80459251 - Lect1 protein_coding retained_intron MGP_CBAJ_T0039841.1 MGP_CBAJ_G0021312.1 mouse_genomes_project 14 80458532 80462566 - Lect1 protein_coding processed_transcript MGP_CBAJ_T0039842.1 MGP_CBAJ_G0021312.1 mouse_genomes_project 14 80459042 80462714 - Lect1 protein_coding retained_intron MGP_CBAJ_T0039695.1 MGP_CBAJ_G0021260.1 mouse_genomes_project 14 70632534 70733091 + MGP_CBAJ_P0039695 Gfra2 protein_coding protein_coding MGP_CBAJ_T0039282.1 MGP_CBAJ_G0021096.1 mouse_genomes_project 14 54270694 54281398 - MGP_CBAJ_P0039282 Gzmd protein_coding protein_coding MGP_CBAJ_T0038713.1 MGP_CBAJ_G0020924.1 mouse_genomes_project 14 44352688 44410204 + MGP_CBAJ_P0038713 protein_coding protein_coding MGP_CBAJ_T0003473.1 MGP_CBAJ_G0003160.1 mouse_genomes_project 14 52017873 52029160 - antisense antisense MGP_CBAJ_T0039704.1 MGP_CBAJ_G0021263.1 mouse_genomes_project 14 72961856 72981840 - MGP_CBAJ_P0039704 Cysltr2 protein_coding protein_coding MGP_CBAJ_T0039705.1 MGP_CBAJ_G0021263.1 mouse_genomes_project 14 72961856 72981840 - MGP_CBAJ_P0039705 Cysltr2 protein_coding protein_coding MGP_CBAJ_T0039390.1 MGP_CBAJ_G0021138.1 mouse_genomes_project 14 58724303 58733147 + MGP_CBAJ_P0039390 4930563I02Rik protein_coding protein_coding MGP_CBAJ_T0039391.1 MGP_CBAJ_G0021138.1 mouse_genomes_project 14 58724749 58733157 + MGP_CBAJ_P0039391 4930563I02Rik protein_coding protein_coding MGP_CBAJ_T0101649.1 MGP_CBAJ_G0039680.1 mouse_genomes_project 14 50157728 50160048 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0003490.1 MGP_CBAJ_G0003172.1 mouse_genomes_project 14 62584869 62593760 + Gm17232 antisense antisense MGP_CBAJ_T0038027.1 MGP_CBAJ_G0020730.1 mouse_genomes_project 14 14061380 14103059 - MGP_CBAJ_P0038027 Kcnk5 protein_coding protein_coding MGP_CBAJ_T0039396.1 MGP_CBAJ_G0021142.1 mouse_genomes_project 14 59321593 59389633 + MGP_CBAJ_P0039396 Spata13 protein_coding protein_coding MGP_CBAJ_T0039397.1 MGP_CBAJ_G0021142.1 mouse_genomes_project 14 59321835 59471898 + MGP_CBAJ_P0039397 Spata13 protein_coding protein_coding MGP_CBAJ_T0039398.1 MGP_CBAJ_G0021142.1 mouse_genomes_project 14 59322321 59471905 + MGP_CBAJ_P0039398 Spata13 protein_coding protein_coding MGP_CBAJ_T0039399.1 MGP_CBAJ_G0021142.1 mouse_genomes_project 14 59322326 59389674 + MGP_CBAJ_P0039399 Spata13 protein_coding protein_coding MGP_CBAJ_T0039400.1 MGP_CBAJ_G0021142.1 mouse_genomes_project 14 59322347 59389159 + Spata13 protein_coding processed_transcript MGP_CBAJ_T0039401.1 MGP_CBAJ_G0021142.1 mouse_genomes_project 14 59390240 59407649 + MGP_CBAJ_P0039401 Spata13 protein_coding protein_coding MGP_CBAJ_T0039402.1 MGP_CBAJ_G0021142.1 mouse_genomes_project 14 59401156 59405074 + Spata13 protein_coding processed_transcript MGP_CBAJ_T0039403.1 MGP_CBAJ_G0021142.1 mouse_genomes_project 14 59404932 59457367 + MGP_CBAJ_P0039403 Spata13 protein_coding protein_coding MGP_CBAJ_T0039404.1 MGP_CBAJ_G0021142.1 mouse_genomes_project 14 59431825 59471898 + MGP_CBAJ_P0039404 Spata13 protein_coding protein_coding MGP_CBAJ_T0039405.1 MGP_CBAJ_G0021142.1 mouse_genomes_project 14 59458427 59470015 + Spata13 protein_coding retained_intron MGP_CBAJ_T0038017.1 MGP_CBAJ_G0020725.1 mouse_genomes_project 14 13174353 13184492 - MGP_CBAJ_P0038017 Gm9637 protein_coding protein_coding MGP_CBAJ_T0039801.1 MGP_CBAJ_G0021291.1 mouse_genomes_project 14 76975131 76999162 - MGP_CBAJ_P0039801 Serp2 protein_coding protein_coding MGP_CBAJ_T0039768.1 MGP_CBAJ_G0021278.1 mouse_genomes_project 14 75466009 75510579 + MGP_CBAJ_P0039768 Cpb2 protein_coding protein_coding MGP_CBAJ_T0039346.1 MGP_CBAJ_G0021124.1 mouse_genomes_project 14 56232419 56296458 - MGP_CBAJ_P0039346 Zdhhc20 protein_coding protein_coding MGP_CBAJ_T0039347.1 MGP_CBAJ_G0021124.1 mouse_genomes_project 14 56235826 56296376 - MGP_CBAJ_P0039347 Zdhhc20 protein_coding unknown_likely_coding MGP_CBAJ_T0037972.1 MGP_CBAJ_G0020715.1 mouse_genomes_project 14 9526014 9537081 - MGP_CBAJ_P0037972 Oxsm protein_coding protein_coding MGP_CBAJ_T0037973.1 MGP_CBAJ_G0020715.1 mouse_genomes_project 14 9527259 9530626 - MGP_CBAJ_P0037973 Oxsm protein_coding protein_coding MGP_CBAJ_T0037974.1 MGP_CBAJ_G0020715.1 mouse_genomes_project 14 9527932 9536449 - MGP_CBAJ_P0037974 Oxsm protein_coding protein_coding MGP_CBAJ_T0037975.1 MGP_CBAJ_G0020715.1 mouse_genomes_project 14 9529467 9536447 - MGP_CBAJ_P0037975 Oxsm protein_coding protein_coding MGP_CBAJ_T0039650.1 MGP_CBAJ_G0021244.1 mouse_genomes_project 14 69982619 70035075 - MGP_CBAJ_P0039650 Slc39a14 protein_coding protein_coding MGP_CBAJ_T0039651.1 MGP_CBAJ_G0021244.1 mouse_genomes_project 14 69987786 70032081 - MGP_CBAJ_P0039651 Slc39a14 protein_coding protein_coding MGP_CBAJ_T0039652.1 MGP_CBAJ_G0021244.1 mouse_genomes_project 14 69987800 70035075 - MGP_CBAJ_P0039652 Slc39a14 protein_coding protein_coding MGP_CBAJ_T0039653.1 MGP_CBAJ_G0021244.1 mouse_genomes_project 14 69990275 69992744 - Slc39a14 protein_coding retained_intron MGP_CBAJ_T0039654.1 MGP_CBAJ_G0021244.1 mouse_genomes_project 14 69992440 69995429 - Slc39a14 protein_coding retained_intron MGP_CBAJ_T0039655.1 MGP_CBAJ_G0021244.1 mouse_genomes_project 14 69995462 70035064 - Slc39a14 protein_coding retained_intron MGP_CBAJ_T0039656.1 MGP_CBAJ_G0021244.1 mouse_genomes_project 14 69996614 70032083 - Slc39a14 protein_coding retained_intron MGP_CBAJ_T0039657.1 MGP_CBAJ_G0021244.1 mouse_genomes_project 14 69997296 70017890 - MGP_CBAJ_P0039657 Slc39a14 protein_coding protein_coding MGP_CBAJ_T0039658.1 MGP_CBAJ_G0021244.1 mouse_genomes_project 14 69997969 70035044 - MGP_CBAJ_P0039658 Slc39a14 protein_coding protein_coding MGP_CBAJ_T0039659.1 MGP_CBAJ_G0021244.1 mouse_genomes_project 14 69998003 70007506 - MGP_CBAJ_P0039659 Slc39a14 protein_coding protein_coding MGP_CBAJ_T0039660.1 MGP_CBAJ_G0021244.1 mouse_genomes_project 14 69998064 70035065 - MGP_CBAJ_P0039660 Slc39a14 protein_coding protein_coding MGP_CBAJ_T0039661.1 MGP_CBAJ_G0021244.1 mouse_genomes_project 14 70000236 70015210 - MGP_CBAJ_P0039661 Slc39a14 protein_coding protein_coding MGP_CBAJ_T0039662.1 MGP_CBAJ_G0021244.1 mouse_genomes_project 14 70014768 70035075 - Slc39a14 protein_coding retained_intron MGP_CBAJ_T0003498.1 MGP_CBAJ_G0003180.1 mouse_genomes_project 14 69135006 69138369 - Gm27221 antisense antisense MGP_CBAJ_T0002498.1 MGP_CBAJ_G0002403.1 mouse_genomes_project 14 52079203 52079260 + MGP_CBAJ_P0002498 Traj25 TR_J_gene TR_J_gene MGP_CBAJ_T0002495.1 MGP_CBAJ_G0002400.1 mouse_genomes_project 14 52076014 52076079 + MGP_CBAJ_P0002495 Traj28 TR_J_gene TR_J_gene MGP_CBAJ_T0039045.1 MGP_CBAJ_G0021029.1 mouse_genomes_project 14 52570705 52571156 + MGP_CBAJ_P0039045 Gm20726 protein_coding protein_coding MGP_CBAJ_T0000887.1 MGP_CBAJ_G0000822.1 mouse_genomes_project 14 69063539 69065036 + TEC TEC MGP_CBAJ_T0039345.1 MGP_CBAJ_G0021123.1 mouse_genomes_project 14 56225956 56228463 + MGP_CBAJ_P0039345 Mrpl57 protein_coding protein_coding MGP_CBAJ_T0009894.1 MGP_CBAJ_G0008032.1 mouse_genomes_project 14 117031511 117031606 + Gm22802 miRNA miRNA MGP_CBAJ_T0012853.1 MGP_CBAJ_G0010965.1 mouse_genomes_project 14 56526663 56527021 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002599.1 MGP_CBAJ_G0002490.1 mouse_genomes_project 14 51672463 51673189 + MGP_CBAJ_P0002599 Trav18 TR_V_gene TR_V_gene MGP_CBAJ_T0002600.1 MGP_CBAJ_G0002490.1 mouse_genomes_project 14 51672463 51673189 + MGP_CBAJ_P0002600 Trav18 TR_V_gene TR_V_gene MGP_CBAJ_T0012821.1 MGP_CBAJ_G0010933.1 mouse_genomes_project 14 21175027 21175825 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098825.1 MGP_CBAJ_G0037080.1 mouse_genomes_project 14 6794034 6794131 + Gm25964 snRNA snRNA MGP_CBAJ_T0038801.1 MGP_CBAJ_G0020956.1 mouse_genomes_project 14 47657007 47657633 + MGP_CBAJ_P0038801 protein_coding protein_coding MGP_CBAJ_T0039453.1 MGP_CBAJ_G0021165.1 mouse_genomes_project 14 62153748 62177192 + MGP_CBAJ_P0039453 Ctsb protein_coding protein_coding MGP_CBAJ_T0012852.1 MGP_CBAJ_G0010964.1 mouse_genomes_project 14 55763166 55763959 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0038508.1 MGP_CBAJ_G0020847.1 mouse_genomes_project 14 27676050 27741285 - MGP_CBAJ_P0038508 Chat protein_coding protein_coding MGP_CBAJ_T0038552.1 MGP_CBAJ_G0020865.1 mouse_genomes_project 14 29455460 29461356 + MGP_CBAJ_P0038552 Gm5460 protein_coding protein_coding MGP_CBAJ_T0039076.1 MGP_CBAJ_G0021035.1 mouse_genomes_project 14 52855924 52863710 - MGP_CBAJ_P0039076 Homez protein_coding protein_coding MGP_CBAJ_T0039077.1 MGP_CBAJ_G0021035.1 mouse_genomes_project 14 52856979 52866943 - MGP_CBAJ_P0039077 Homez protein_coding protein_coding MGP_CBAJ_T0039078.1 MGP_CBAJ_G0021035.1 mouse_genomes_project 14 52858765 52860407 - MGP_CBAJ_P0039078 Homez protein_coding protein_coding MGP_CBAJ_T0039079.1 MGP_CBAJ_G0021035.1 mouse_genomes_project 14 52861118 52875828 - MGP_CBAJ_P0039079 Homez protein_coding protein_coding MGP_CBAJ_T0002570.1 MGP_CBAJ_G0002464.1 mouse_genomes_project 14 50441025 50441535 + MGP_CBAJ_P0002570 TR_V_gene TR_V_gene MGP_CBAJ_T0002571.1 MGP_CBAJ_G0002464.1 mouse_genomes_project 14 50441062 50441535 + MGP_CBAJ_P0002571 TR_V_gene TR_V_gene MGP_CBAJ_T0002590.1 MGP_CBAJ_G0002483.1 mouse_genomes_project 14 51249284 51249836 + MGP_CBAJ_P0002590 TR_V_gene TR_V_gene MGP_CBAJ_T0039393.1 MGP_CBAJ_G0021139.1 mouse_genomes_project 14 58871981 58905916 - MGP_CBAJ_P0039393 Nupl1 protein_coding protein_coding MGP_CBAJ_T0038518.1 MGP_CBAJ_G0020855.1 mouse_genomes_project 14 28283812 28546462 - MGP_CBAJ_P0038518 Wdfy4 protein_coding protein_coding MGP_CBAJ_T0038519.1 MGP_CBAJ_G0020855.1 mouse_genomes_project 14 28283835 28546462 - MGP_CBAJ_P0038519 Wdfy4 protein_coding protein_coding MGP_CBAJ_T0038526.1 MGP_CBAJ_G0020855.1 mouse_genomes_project 14 28346213 28512382 - MGP_CBAJ_P0038526 Wdfy4 protein_coding unknown_likely_coding MGP_CBAJ_T0038527.1 MGP_CBAJ_G0020855.1 mouse_genomes_project 14 28350465 28355499 - MGP_CBAJ_P0038527 Wdfy4 protein_coding protein_coding MGP_CBAJ_T0038528.1 MGP_CBAJ_G0020855.1 mouse_genomes_project 14 28512187 28546904 - MGP_CBAJ_P0038528 Wdfy4 protein_coding protein_coding MGP_CBAJ_T0039213.1 MGP_CBAJ_G0021067.1 mouse_genomes_project 14 53717990 53728275 - MGP_CBAJ_P0039213 Ipo4 protein_coding protein_coding MGP_CBAJ_T0039214.1 MGP_CBAJ_G0021067.1 mouse_genomes_project 14 53718224 53728222 - MGP_CBAJ_P0039214 Ipo4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039215.1 MGP_CBAJ_G0021067.1 mouse_genomes_project 14 53718306 53719023 - Ipo4 protein_coding retained_intron MGP_CBAJ_T0039216.1 MGP_CBAJ_G0021067.1 mouse_genomes_project 14 53718309 53720154 - Ipo4 protein_coding processed_transcript MGP_CBAJ_T0039217.1 MGP_CBAJ_G0021067.1 mouse_genomes_project 14 53718312 53719008 - Ipo4 protein_coding processed_transcript MGP_CBAJ_T0039218.1 MGP_CBAJ_G0021067.1 mouse_genomes_project 14 53718314 53719981 - Ipo4 protein_coding retained_intron MGP_CBAJ_T0039219.1 MGP_CBAJ_G0021067.1 mouse_genomes_project 14 53718330 53728548 - MGP_CBAJ_P0039219 Ipo4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039220.1 MGP_CBAJ_G0021067.1 mouse_genomes_project 14 53718486 53730486 - Ipo4 protein_coding processed_transcript MGP_CBAJ_T0039221.1 MGP_CBAJ_G0021067.1 mouse_genomes_project 14 53719888 53720515 - Ipo4 protein_coding retained_intron MGP_CBAJ_T0039222.1 MGP_CBAJ_G0021067.1 mouse_genomes_project 14 53721373 53723251 - Ipo4 protein_coding retained_intron MGP_CBAJ_T0039223.1 MGP_CBAJ_G0021067.1 mouse_genomes_project 14 53725518 53726249 - Ipo4 protein_coding retained_intron MGP_CBAJ_T0039224.1 MGP_CBAJ_G0021067.1 mouse_genomes_project 14 53726347 53727801 - Ipo4 protein_coding retained_intron MGP_CBAJ_T0039225.1 MGP_CBAJ_G0021067.1 mouse_genomes_project 14 53726638 53728160 - Ipo4 protein_coding retained_intron MGP_CBAJ_T0002539.1 MGP_CBAJ_G0002442.1 mouse_genomes_project 14 52066887 52066952 + TR_J_pseudogene TR_J_pseudogene MGP_CBAJ_T0039837.1 MGP_CBAJ_G0021311.1 mouse_genomes_project 14 80401501 80446816 + MGP_CBAJ_P0039837 Sugt1 protein_coding protein_coding MGP_CBAJ_T0038559.1 MGP_CBAJ_G0020871.1 mouse_genomes_project 14 29649898 29652675 + Syt15 protein_coding retained_intron MGP_CBAJ_T0038560.1 MGP_CBAJ_G0020871.1 mouse_genomes_project 14 29650349 29658041 + MGP_CBAJ_P0038560 Syt15 protein_coding protein_coding MGP_CBAJ_T0038561.1 MGP_CBAJ_G0020871.1 mouse_genomes_project 14 29650350 29660722 + MGP_CBAJ_P0038561 Syt15 protein_coding protein_coding MGP_CBAJ_T0039273.1 MGP_CBAJ_G0021087.1 mouse_genomes_project 14 54019517 54022464 - MGP_CBAJ_P0039273 Sdr39u1 protein_coding protein_coding MGP_CBAJ_T0002597.1 MGP_CBAJ_G0002489.1 mouse_genomes_project 14 51629959 51630436 + MGP_CBAJ_P0002597 Trav17 TR_V_gene TR_V_gene MGP_CBAJ_T0002598.1 MGP_CBAJ_G0002489.1 mouse_genomes_project 14 51629959 51630436 + MGP_CBAJ_P0002598 Trav17 TR_V_gene TR_V_gene MGP_CBAJ_T0039304.1 MGP_CBAJ_G0021109.1 mouse_genomes_project 14 55142779 55221113 + MGP_CBAJ_P0039304 Zmym2 protein_coding unknown_likely_coding MGP_CBAJ_T0098826.1 MGP_CBAJ_G0037081.1 mouse_genomes_project 14 11531644 11531707 + Gm27851 snRNA snRNA MGP_CBAJ_T0039112.1 MGP_CBAJ_G0021048.1 mouse_genomes_project 14 53098409 53142039 + MGP_CBAJ_P0039112 Thtpa protein_coding protein_coding MGP_CBAJ_T0039113.1 MGP_CBAJ_G0021048.1 mouse_genomes_project 14 53099479 53142426 + Thtpa protein_coding processed_transcript MGP_CBAJ_T0039114.1 MGP_CBAJ_G0021048.1 mouse_genomes_project 14 53100015 53143500 + MGP_CBAJ_P0039114 Thtpa protein_coding protein_coding MGP_CBAJ_T0039119.1 MGP_CBAJ_G0021048.1 mouse_genomes_project 14 53139297 53143500 + MGP_CBAJ_P0039119 Thtpa protein_coding protein_coding MGP_CBAJ_T0039649.1 MGP_CBAJ_G0021243.1 mouse_genomes_project 14 69879354 69962838 - MGP_CBAJ_P0039649 Ppp3cc protein_coding protein_coding MGP_CBAJ_T0039924.1 MGP_CBAJ_G0021340.1 mouse_genomes_project 14 107339705 107389364 - MGP_CBAJ_P0039924 Mycbp2 protein_coding protein_coding MGP_CBAJ_T0039925.1 MGP_CBAJ_G0021340.1 mouse_genomes_project 14 107339705 107602871 - MGP_CBAJ_P0039925 Mycbp2 protein_coding protein_coding MGP_CBAJ_T0039926.1 MGP_CBAJ_G0021340.1 mouse_genomes_project 14 107339705 107602489 - MGP_CBAJ_P0039926 Mycbp2 protein_coding protein_coding MGP_CBAJ_T0039927.1 MGP_CBAJ_G0021340.1 mouse_genomes_project 14 107340414 107602588 - MGP_CBAJ_P0039927 Mycbp2 protein_coding unknown_likely_coding MGP_CBAJ_T0039928.1 MGP_CBAJ_G0021340.1 mouse_genomes_project 14 107340427 107341691 - Mycbp2 protein_coding processed_transcript MGP_CBAJ_T0039929.1 MGP_CBAJ_G0021340.1 mouse_genomes_project 14 107364648 107386398 - Mycbp2 protein_coding retained_intron MGP_CBAJ_T0039930.1 MGP_CBAJ_G0021340.1 mouse_genomes_project 14 107389413 107427972 - MGP_CBAJ_P0039930 Mycbp2 protein_coding protein_coding MGP_CBAJ_T0039931.1 MGP_CBAJ_G0021340.1 mouse_genomes_project 14 107568581 107602885 - Mycbp2 protein_coding retained_intron MGP_CBAJ_T0038618.1 MGP_CBAJ_G0020894.1 mouse_genomes_project 14 37236365 37250120 - MGP_CBAJ_P0038618 Fam213a protein_coding protein_coding MGP_CBAJ_T0038619.1 MGP_CBAJ_G0020894.1 mouse_genomes_project 14 37237161 37250435 - MGP_CBAJ_P0038619 Fam213a protein_coding protein_coding MGP_CBAJ_T0038620.1 MGP_CBAJ_G0020894.1 mouse_genomes_project 14 37240363 37250881 - MGP_CBAJ_P0038620 Fam213a protein_coding protein_coding MGP_CBAJ_T0038621.1 MGP_CBAJ_G0020894.1 mouse_genomes_project 14 37241477 37249006 - Fam213a protein_coding retained_intron MGP_CBAJ_T0038622.1 MGP_CBAJ_G0020894.1 mouse_genomes_project 14 37241515 37252880 - MGP_CBAJ_P0038622 Fam213a protein_coding protein_coding MGP_CBAJ_T0038623.1 MGP_CBAJ_G0020894.1 mouse_genomes_project 14 37241557 37259680 - MGP_CBAJ_P0038623 Fam213a protein_coding protein_coding MGP_CBAJ_T0038624.1 MGP_CBAJ_G0020894.1 mouse_genomes_project 14 37249942 37252824 - MGP_CBAJ_P0038624 Fam213a protein_coding protein_coding MGP_CBAJ_T0002499.1 MGP_CBAJ_G0002404.1 mouse_genomes_project 14 52080030 52080093 + MGP_CBAJ_P0002499 Traj24 TR_J_gene TR_J_gene MGP_CBAJ_T0002502.1 MGP_CBAJ_G0002407.1 mouse_genomes_project 14 52083183 52083240 + MGP_CBAJ_P0002502 Traj21 TR_J_gene TR_J_gene MGP_CBAJ_T0100114.1 MGP_CBAJ_G0038369.1 mouse_genomes_project 14 67145189 67145321 + Gm24981 snoRNA snoRNA MGP_CBAJ_T0006603.1 MGP_CBAJ_G0005452.1 mouse_genomes_project 14 49733487 49750043 + Gm26590 lincRNA lincRNA MGP_CBAJ_T0101269.1 MGP_CBAJ_G0039398.1 mouse_genomes_project 14 69185967 69275050 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0039488.1 MGP_CBAJ_G0021182.1 mouse_genomes_project 14 63858030 64025751 + MGP_CBAJ_P0039488 Kif13b protein_coding protein_coding MGP_CBAJ_T0039489.1 MGP_CBAJ_G0021182.1 mouse_genomes_project 14 63858101 64029075 + MGP_CBAJ_P0039489 Kif13b protein_coding unknown_likely_coding MGP_CBAJ_T0039585.1 MGP_CBAJ_G0021214.1 mouse_genomes_project 14 67307090 67330803 + MGP_CBAJ_P0039585 Kctd9 protein_coding protein_coding MGP_CBAJ_T0039586.1 MGP_CBAJ_G0021214.1 mouse_genomes_project 14 67307251 67333457 + MGP_CBAJ_P0039586 Kctd9 protein_coding protein_coding MGP_CBAJ_T0039587.1 MGP_CBAJ_G0021214.1 mouse_genomes_project 14 67307293 67320849 + MGP_CBAJ_P0039587 Kctd9 protein_coding protein_coding MGP_CBAJ_T0039588.1 MGP_CBAJ_G0021214.1 mouse_genomes_project 14 67307438 67333308 + MGP_CBAJ_P0039588 Kctd9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039589.1 MGP_CBAJ_G0021214.1 mouse_genomes_project 14 67307490 67333309 + MGP_CBAJ_P0039589 Kctd9 protein_coding protein_coding MGP_CBAJ_T0000883.1 MGP_CBAJ_G0000818.1 mouse_genomes_project 14 64061846 64065251 - TEC TEC MGP_CBAJ_T0038071.1 MGP_CBAJ_G0020748.1 mouse_genomes_project 14 14700533 14713585 - MGP_CBAJ_P0038071 Ndst2 protein_coding unknown_likely_coding MGP_CBAJ_T0039595.1 MGP_CBAJ_G0021219.1 mouse_genomes_project 14 68159361 68197474 - MGP_CBAJ_P0039595 Adam7 protein_coding protein_coding MGP_CBAJ_T0039596.1 MGP_CBAJ_G0021219.1 mouse_genomes_project 14 68159853 68171459 - Adam7 protein_coding retained_intron MGP_CBAJ_T0006570.1 MGP_CBAJ_G0005430.1 mouse_genomes_project 14 19767276 19794565 - Gm26660 lincRNA lincRNA MGP_CBAJ_T0003493.1 MGP_CBAJ_G0003175.1 mouse_genomes_project 14 63274488 63277946 - Gm17116 antisense antisense MGP_CBAJ_T0038433.1 MGP_CBAJ_G0020832.1 mouse_genomes_project 14 26633557 26648337 + MGP_CBAJ_P0038433 Eaf1 protein_coding protein_coding MGP_CBAJ_T0002579.1 MGP_CBAJ_G0002472.1 mouse_genomes_project 14 50735304 51057017 + MGP_CBAJ_P0002579 TR_V_gene TR_V_gene MGP_CBAJ_T0038822.1 MGP_CBAJ_G0020969.1 mouse_genomes_project 14 48197911 48200043 + MGP_CBAJ_P0038822 Apex1 protein_coding protein_coding MGP_CBAJ_T0038823.1 MGP_CBAJ_G0020969.1 mouse_genomes_project 14 48197912 48199455 + MGP_CBAJ_P0038823 Apex1 protein_coding protein_coding MGP_CBAJ_T0038824.1 MGP_CBAJ_G0020969.1 mouse_genomes_project 14 48197921 48198577 + MGP_CBAJ_P0038824 Apex1 protein_coding protein_coding MGP_CBAJ_T0038825.1 MGP_CBAJ_G0020969.1 mouse_genomes_project 14 48198228 48200043 + MGP_CBAJ_P0038825 Apex1 protein_coding protein_coding MGP_CBAJ_T0037958.1 MGP_CBAJ_G0020709.1 mouse_genomes_project 14 7318707 7324847 + MGP_CBAJ_P0037958 Olfr31 protein_coding protein_coding MGP_CBAJ_T0037959.1 MGP_CBAJ_G0020709.1 mouse_genomes_project 14 7323893 7324847 + MGP_CBAJ_P0037959 Olfr31 protein_coding protein_coding MGP_CBAJ_T0038507.1 MGP_CBAJ_G0020846.1 mouse_genomes_project 14 27647961 27663230 - MGP_CBAJ_P0038507 1700024G13Rik protein_coding protein_coding MGP_CBAJ_T0039834.1 MGP_CBAJ_G0021309.1 mouse_genomes_project 14 80250340 80275726 - MGP_CBAJ_P0039834 Wbp4 protein_coding protein_coding MGP_CBAJ_T0038454.1 MGP_CBAJ_G0020835.1 mouse_genomes_project 14 26791868 26817954 + Btd protein_coding processed_transcript MGP_CBAJ_T0038455.1 MGP_CBAJ_G0020835.1 mouse_genomes_project 14 26791897 26819362 + MGP_CBAJ_P0038455 Btd protein_coding protein_coding MGP_CBAJ_T0038049.1 MGP_CBAJ_G0020740.1 mouse_genomes_project 14 14456615 14508608 - MGP_CBAJ_P0038049 Ppp3cb protein_coding protein_coding MGP_CBAJ_T0038050.1 MGP_CBAJ_G0020740.1 mouse_genomes_project 14 14457119 14508582 - MGP_CBAJ_P0038050 Ppp3cb protein_coding protein_coding MGP_CBAJ_T0038051.1 MGP_CBAJ_G0020740.1 mouse_genomes_project 14 14457281 14508547 - MGP_CBAJ_P0038051 Ppp3cb protein_coding protein_coding MGP_CBAJ_T0038052.1 MGP_CBAJ_G0020740.1 mouse_genomes_project 14 14458803 14460989 - Ppp3cb protein_coding retained_intron MGP_CBAJ_T0038053.1 MGP_CBAJ_G0020740.1 mouse_genomes_project 14 14464772 14508475 - MGP_CBAJ_P0038053 Ppp3cb protein_coding protein_coding MGP_CBAJ_T0038054.1 MGP_CBAJ_G0020740.1 mouse_genomes_project 14 14466550 14475227 - Ppp3cb protein_coding retained_intron MGP_CBAJ_T0038055.1 MGP_CBAJ_G0020740.1 mouse_genomes_project 14 14474658 14479939 - Ppp3cb protein_coding retained_intron MGP_CBAJ_T0038056.1 MGP_CBAJ_G0020740.1 mouse_genomes_project 14 14479825 14485986 - Ppp3cb protein_coding retained_intron MGP_CBAJ_T0002574.1 MGP_CBAJ_G0002467.1 mouse_genomes_project 14 50657611 50658119 + MGP_CBAJ_P0002574 TR_V_gene TR_V_gene MGP_CBAJ_T0038416.1 MGP_CBAJ_G0020827.1 mouse_genomes_project 14 26367714 26376215 + MGP_CBAJ_P0038416 Bap1 protein_coding protein_coding MGP_CBAJ_T0038417.1 MGP_CBAJ_G0020827.1 mouse_genomes_project 14 26367767 26369279 + Bap1 protein_coding retained_intron MGP_CBAJ_T0038418.1 MGP_CBAJ_G0020827.1 mouse_genomes_project 14 26367775 26370466 + Bap1 protein_coding retained_intron MGP_CBAJ_T0038419.1 MGP_CBAJ_G0020827.1 mouse_genomes_project 14 26367802 26376201 + Bap1 protein_coding retained_intron MGP_CBAJ_T0038420.1 MGP_CBAJ_G0020827.1 mouse_genomes_project 14 26367844 26371402 + MGP_CBAJ_P0038420 Bap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038421.1 MGP_CBAJ_G0020827.1 mouse_genomes_project 14 26372539 26374795 + MGP_CBAJ_P0038421 Bap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038422.1 MGP_CBAJ_G0020827.1 mouse_genomes_project 14 26372809 26373912 + Bap1 protein_coding retained_intron MGP_CBAJ_T0038423.1 MGP_CBAJ_G0020827.1 mouse_genomes_project 14 26373761 26375159 + Bap1 protein_coding retained_intron MGP_CBAJ_T0039696.1 MGP_CBAJ_G0021261.1 mouse_genomes_project 14 72454011 72623568 - MGP_CBAJ_P0039696 Fndc3a protein_coding protein_coding MGP_CBAJ_T0039697.1 MGP_CBAJ_G0021261.1 mouse_genomes_project 14 72455594 72523695 - MGP_CBAJ_P0039697 Fndc3a protein_coding protein_coding MGP_CBAJ_T0039698.1 MGP_CBAJ_G0021261.1 mouse_genomes_project 14 72478755 72481981 - Fndc3a protein_coding retained_intron MGP_CBAJ_T0039699.1 MGP_CBAJ_G0021261.1 mouse_genomes_project 14 72482004 72641254 - MGP_CBAJ_P0039699 Fndc3a protein_coding protein_coding MGP_CBAJ_T0039700.1 MGP_CBAJ_G0021261.1 mouse_genomes_project 14 72491826 72570845 - MGP_CBAJ_P0039700 Fndc3a protein_coding nonsense_mediated_decay MGP_CBAJ_T0039701.1 MGP_CBAJ_G0021261.1 mouse_genomes_project 14 72519107 72641709 - Fndc3a protein_coding retained_intron MGP_CBAJ_T0039702.1 MGP_CBAJ_G0021261.1 mouse_genomes_project 14 72568015 72641555 - Fndc3a protein_coding retained_intron MGP_CBAJ_T0012826.1 MGP_CBAJ_G0010938.1 mouse_genomes_project 14 28215183 28216194 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0037979.1 MGP_CBAJ_G0020717.1 mouse_genomes_project 14 9672556 9749255 + MGP_CBAJ_P0037979 Top2b protein_coding protein_coding MGP_CBAJ_T0037980.1 MGP_CBAJ_G0020717.1 mouse_genomes_project 14 9705225 9709203 + Top2b protein_coding retained_intron MGP_CBAJ_T0037981.1 MGP_CBAJ_G0020717.1 mouse_genomes_project 14 9728455 9735503 + MGP_CBAJ_P0037981 Top2b protein_coding protein_coding MGP_CBAJ_T0037982.1 MGP_CBAJ_G0020717.1 mouse_genomes_project 14 9730542 9735174 + MGP_CBAJ_P0037982 Top2b protein_coding nonsense_mediated_decay MGP_CBAJ_T0037983.1 MGP_CBAJ_G0020717.1 mouse_genomes_project 14 9732123 9743911 + MGP_CBAJ_P0037983 Top2b protein_coding protein_coding MGP_CBAJ_T0037984.1 MGP_CBAJ_G0020717.1 mouse_genomes_project 14 9741759 9746974 + Top2b protein_coding retained_intron MGP_CBAJ_T0097950.1 MGP_CBAJ_G0036223.1 mouse_genomes_project 14 66037711 66037801 - Gm23899 rRNA rRNA MGP_CBAJ_T0039672.1 MGP_CBAJ_G0021251.1 mouse_genomes_project 14 70255587 70259270 + MGP_CBAJ_P0039672 Reep4 protein_coding protein_coding MGP_CBAJ_T0002660.1 MGP_CBAJ_G0002540.1 mouse_genomes_project 14 51793636 51794255 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0003507.1 MGP_CBAJ_G0003185.1 mouse_genomes_project 14 80601180 80604016 + Gm9748 antisense antisense MGP_CBAJ_T0003508.1 MGP_CBAJ_G0003185.1 mouse_genomes_project 14 80601254 80603964 + Gm9748 antisense antisense MGP_CBAJ_T0039591.1 MGP_CBAJ_G0021216.1 mouse_genomes_project 14 67347474 67538065 - MGP_CBAJ_P0039591 Dock5 protein_coding protein_coding MGP_CBAJ_T0039430.1 MGP_CBAJ_G0021155.1 mouse_genomes_project 14 61302714 61375388 - MGP_CBAJ_P0039430 Gucy1b2 protein_coding protein_coding MGP_CBAJ_T0039431.1 MGP_CBAJ_G0021155.1 mouse_genomes_project 14 61302829 61375385 - MGP_CBAJ_P0039431 Gucy1b2 protein_coding protein_coding MGP_CBAJ_T0039432.1 MGP_CBAJ_G0021155.1 mouse_genomes_project 14 61331823 61373891 - MGP_CBAJ_P0039432 Gucy1b2 protein_coding protein_coding MGP_CBAJ_T0100138.1 MGP_CBAJ_G0038393.1 mouse_genomes_project 14 111404314 111404441 + Gm23437 snoRNA snoRNA MGP_CBAJ_T0017123.1 MGP_CBAJ_G0015009.1 mouse_genomes_project 14 15960057 15963517 + A430057M04Rik processed_transcript processed_transcript MGP_CBAJ_T0017124.1 MGP_CBAJ_G0015009.1 mouse_genomes_project 14 15960929 15969462 + A430057M04Rik processed_transcript processed_transcript MGP_CBAJ_T0039120.1 MGP_CBAJ_G0021050.1 mouse_genomes_project 14 53143091 53151045 - MGP_CBAJ_P0039120 Ap1g2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039121.1 MGP_CBAJ_G0021050.1 mouse_genomes_project 14 53143363 53143902 - Ap1g2 protein_coding retained_intron MGP_CBAJ_T0039122.1 MGP_CBAJ_G0021050.1 mouse_genomes_project 14 53143363 53150778 - MGP_CBAJ_P0039122 Ap1g2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039123.1 MGP_CBAJ_G0021050.1 mouse_genomes_project 14 53143363 53151059 - MGP_CBAJ_P0039123 Ap1g2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039124.1 MGP_CBAJ_G0021050.1 mouse_genomes_project 14 53143363 53151104 - MGP_CBAJ_P0039124 Ap1g2 protein_coding protein_coding MGP_CBAJ_T0039125.1 MGP_CBAJ_G0021050.1 mouse_genomes_project 14 53143368 53150658 - MGP_CBAJ_P0039125 Ap1g2 protein_coding protein_coding MGP_CBAJ_T0039126.1 MGP_CBAJ_G0021050.1 mouse_genomes_project 14 53143567 53150643 - Ap1g2 protein_coding processed_transcript MGP_CBAJ_T0039127.1 MGP_CBAJ_G0021050.1 mouse_genomes_project 14 53144949 53145302 - Ap1g2 protein_coding retained_intron MGP_CBAJ_T0039128.1 MGP_CBAJ_G0021050.1 mouse_genomes_project 14 53146860 53149021 - Ap1g2 protein_coding retained_intron MGP_CBAJ_T0039129.1 MGP_CBAJ_G0021050.1 mouse_genomes_project 14 53147143 53149402 - Ap1g2 protein_coding retained_intron MGP_CBAJ_T0039130.1 MGP_CBAJ_G0021050.1 mouse_genomes_project 14 53150216 53151072 - Ap1g2 protein_coding retained_intron MGP_CBAJ_T0039131.1 MGP_CBAJ_G0021050.1 mouse_genomes_project 14 53150435 53151019 - Ap1g2 protein_coding processed_transcript MGP_CBAJ_T0100110.1 MGP_CBAJ_G0038365.1 mouse_genomes_project 14 61572822 61572954 - Gm23816 snoRNA snoRNA MGP_CBAJ_T0039817.1 MGP_CBAJ_G0021299.1 mouse_genomes_project 14 78892983 78926572 - MGP_CBAJ_P0039817 Tnfsf11 protein_coding protein_coding MGP_CBAJ_T0039268.1 MGP_CBAJ_G0021084.1 mouse_genomes_project 14 53969794 53993158 + MGP_CBAJ_P0039268 Nynrin protein_coding protein_coding MGP_CBAJ_T0039269.1 MGP_CBAJ_G0021084.1 mouse_genomes_project 14 53969873 53993602 + MGP_CBAJ_P0039269 Nynrin protein_coding protein_coding MGP_CBAJ_T0040055.1 MGP_CBAJ_G0021390.1 mouse_genomes_project 14 131082870 131396488 + MGP_CBAJ_P0040055 Itgbl1 protein_coding protein_coding MGP_CBAJ_T0040056.1 MGP_CBAJ_G0021390.1 mouse_genomes_project 14 131083024 131395926 + MGP_CBAJ_P0040056 Itgbl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040057.1 MGP_CBAJ_G0021390.1 mouse_genomes_project 14 131084323 131396488 + MGP_CBAJ_P0040057 Itgbl1 protein_coding protein_coding MGP_CBAJ_T0012841.1 MGP_CBAJ_G0010953.1 mouse_genomes_project 14 50259567 50259792 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012883.1 MGP_CBAJ_G0010995.1 mouse_genomes_project 14 131125302 131125516 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0039138.1 MGP_CBAJ_G0021053.1 mouse_genomes_project 14 53555343 53569112 + MGP_CBAJ_P0039138 Dhrs4 protein_coding protein_coding MGP_CBAJ_T0037970.1 MGP_CBAJ_G0020714.1 mouse_genomes_project 14 8535836 8627807 - MGP_CBAJ_P0037970 Lrrc3b protein_coding protein_coding MGP_CBAJ_T0037971.1 MGP_CBAJ_G0020714.1 mouse_genomes_project 14 8535837 8625316 - MGP_CBAJ_P0037971 Lrrc3b protein_coding protein_coding MGP_CBAJ_T0039040.1 MGP_CBAJ_G0021024.1 mouse_genomes_project 14 52502531 52512660 - MGP_CBAJ_P0039040 Ajuba protein_coding protein_coding MGP_CBAJ_T0039969.1 MGP_CBAJ_G0021357.1 mouse_genomes_project 14 124667291 124710278 - MGP_CBAJ_P0039969 Dct protein_coding protein_coding MGP_CBAJ_T0038481.1 MGP_CBAJ_G0020841.1 mouse_genomes_project 14 27393098 27413162 + MGP_CBAJ_P0038481 Ncoa4 protein_coding protein_coding MGP_CBAJ_T0038482.1 MGP_CBAJ_G0020841.1 mouse_genomes_project 14 27393171 27409548 + MGP_CBAJ_P0038482 Ncoa4 protein_coding protein_coding MGP_CBAJ_T0038483.1 MGP_CBAJ_G0020841.1 mouse_genomes_project 14 27393214 27409433 + MGP_CBAJ_P0038483 Ncoa4 protein_coding protein_coding MGP_CBAJ_T0038484.1 MGP_CBAJ_G0020841.1 mouse_genomes_project 14 27398822 27413162 + MGP_CBAJ_P0038484 Ncoa4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038485.1 MGP_CBAJ_G0020841.1 mouse_genomes_project 14 27399024 27412554 + MGP_CBAJ_P0038485 Ncoa4 protein_coding protein_coding MGP_CBAJ_T0038486.1 MGP_CBAJ_G0020841.1 mouse_genomes_project 14 27399025 27406002 + MGP_CBAJ_P0038486 Ncoa4 protein_coding protein_coding MGP_CBAJ_T0038487.1 MGP_CBAJ_G0020841.1 mouse_genomes_project 14 27399025 27405706 + MGP_CBAJ_P0038487 Ncoa4 protein_coding protein_coding MGP_CBAJ_T0038488.1 MGP_CBAJ_G0020841.1 mouse_genomes_project 14 27399405 27405929 + MGP_CBAJ_P0038488 Ncoa4 protein_coding protein_coding MGP_CBAJ_T0003469.1 MGP_CBAJ_G0003157.1 mouse_genomes_project 14 43897614 43920712 - Gm10371 antisense antisense MGP_CBAJ_T0006612.1 MGP_CBAJ_G0005460.1 mouse_genomes_project 14 60466865 60485227 + Gm27017 lincRNA lincRNA MGP_CBAJ_T0038276.1 MGP_CBAJ_G0020800.1 mouse_genomes_project 14 24914519 24921286 + MGP_CBAJ_P0038276 Selk protein_coding protein_coding MGP_CBAJ_T0038277.1 MGP_CBAJ_G0020800.1 mouse_genomes_project 14 24914647 24919809 + Selk protein_coding processed_transcript MGP_CBAJ_T0009900.1 MGP_CBAJ_G0008038.1 mouse_genomes_project 14 121367449 121367529 + Mir92-1 miRNA miRNA MGP_CBAJ_T0003504.1 MGP_CBAJ_G0003182.1 mouse_genomes_project 14 72508077 72524100 + Gm16549 antisense antisense MGP_CBAJ_T0039631.1 MGP_CBAJ_G0021237.1 mouse_genomes_project 14 69726595 69729308 + MGP_CBAJ_P0039631 Egr3 protein_coding protein_coding MGP_CBAJ_T0039004.1 MGP_CBAJ_G0021015.1 mouse_genomes_project 14 52176614 52177645 - MGP_CBAJ_P0039004 Olfr49 protein_coding protein_coding MGP_CBAJ_T0009887.1 MGP_CBAJ_G0008025.1 mouse_genomes_project 14 80565882 80565980 + Mir759 miRNA miRNA MGP_CBAJ_T0038489.1 MGP_CBAJ_G0020842.1 mouse_genomes_project 14 27405671 27412552 + MGP_CBAJ_P0038489 protein_coding protein_coding MGP_CBAJ_T0003454.1 MGP_CBAJ_G0003143.1 mouse_genomes_project 14 17851853 17856180 + Gm29626 antisense antisense MGP_CBAJ_T0003455.1 MGP_CBAJ_G0003143.1 mouse_genomes_project 14 17851870 17856178 + Gm29626 antisense antisense MGP_CBAJ_T0039243.1 MGP_CBAJ_G0021071.1 mouse_genomes_project 14 53760704 53770312 - MGP_CBAJ_P0039243 Nedd8 protein_coding protein_coding MGP_CBAJ_T0039244.1 MGP_CBAJ_G0021071.1 mouse_genomes_project 14 53760706 53770345 - MGP_CBAJ_P0039244 Nedd8 protein_coding protein_coding MGP_CBAJ_T0039812.1 MGP_CBAJ_G0021297.1 mouse_genomes_project 14 78497686 78598799 + MGP_CBAJ_P0039812 Epsti1 protein_coding protein_coding MGP_CBAJ_T0039813.1 MGP_CBAJ_G0021297.1 mouse_genomes_project 14 78497854 78557034 + MGP_CBAJ_P0039813 Epsti1 protein_coding protein_coding MGP_CBAJ_T0012809.1 MGP_CBAJ_G0010921.1 mouse_genomes_project 14 12251563 12253900 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017114.1 MGP_CBAJ_G0015004.1 mouse_genomes_project 14 42125 95168 - Gm10044 processed_transcript antisense MGP_CBAJ_T0017116.1 MGP_CBAJ_G0015004.1 mouse_genomes_project 14 54312 95092 - Gm10044 processed_transcript antisense MGP_CBAJ_T0017117.1 MGP_CBAJ_G0015004.1 mouse_genomes_project 14 62736 75021 - Gm10044 processed_transcript antisense MGP_CBAJ_T0017118.1 MGP_CBAJ_G0015004.1 mouse_genomes_project 14 71912 75091 - Gm10044 processed_transcript retained_intron MGP_CBAJ_T0017119.1 MGP_CBAJ_G0015004.1 mouse_genomes_project 14 72145 95070 - Gm10044 processed_transcript antisense MGP_CBAJ_T0002607.1 MGP_CBAJ_G0002495.1 mouse_genomes_project 14 51808978 51809628 + MGP_CBAJ_P0002607 Trdv2-2 TR_V_gene TR_V_gene MGP_CBAJ_T0038568.1 MGP_CBAJ_G0020874.1 mouse_genomes_project 14 29812990 29816549 - MGP_CBAJ_P0038568 Fam25c protein_coding protein_coding MGP_CBAJ_T0038651.1 MGP_CBAJ_G0020907.1 mouse_genomes_project 14 41962136 41999512 + MGP_CBAJ_P0038651 protein_coding protein_coding MGP_CBAJ_T0038553.1 MGP_CBAJ_G0020866.1 mouse_genomes_project 14 29465506 29520069 - MGP_CBAJ_P0038553 A630023A22Rik protein_coding protein_coding MGP_CBAJ_T0039630.1 MGP_CBAJ_G0021236.1 mouse_genomes_project 14 69450721 69706025 + MGP_CBAJ_P0039630 Pebp4 protein_coding protein_coding MGP_CBAJ_T0039384.1 MGP_CBAJ_G0021136.1 mouse_genomes_project 14 58222704 58229072 + MGP_CBAJ_P0039384 Shisa2 protein_coding protein_coding MGP_CBAJ_T0101648.1 MGP_CBAJ_G0039679.1 mouse_genomes_project 14 49334911 49335266 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0039851.1 MGP_CBAJ_G0021317.1 mouse_genomes_project 14 88507792 89061794 - MGP_CBAJ_P0039851 Diaph3 protein_coding protein_coding MGP_CBAJ_T0039852.1 MGP_CBAJ_G0021317.1 mouse_genomes_project 14 88508707 89061684 - MGP_CBAJ_P0039852 Diaph3 protein_coding protein_coding MGP_CBAJ_T0012854.1 MGP_CBAJ_G0010966.1 mouse_genomes_project 14 57976020 57976315 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006642.1 MGP_CBAJ_G0005483.1 mouse_genomes_project 14 131412037 131437320 + 1700024B18Rik lincRNA lincRNA MGP_CBAJ_T0003475.1 MGP_CBAJ_G0003162.1 mouse_genomes_project 14 52986997 52990574 + Mhrt antisense antisense MGP_CBAJ_T0003476.1 MGP_CBAJ_G0003162.1 mouse_genomes_project 14 52987106 52995349 + Mhrt antisense antisense MGP_CBAJ_T0039292.1 MGP_CBAJ_G0021105.1 mouse_genomes_project 14 54776525 54864140 + MGP_CBAJ_P0039292 Parp4 protein_coding protein_coding MGP_CBAJ_T0039293.1 MGP_CBAJ_G0021105.1 mouse_genomes_project 14 54859680 54864138 + Parp4 protein_coding retained_intron MGP_CBAJ_T0000873.1 MGP_CBAJ_G0000808.1 mouse_genomes_project 14 44665737 44668297 + TEC TEC MGP_CBAJ_T0038546.1 MGP_CBAJ_G0020859.1 mouse_genomes_project 14 28887023 28966037 + MGP_CBAJ_P0038546 unknown_likely_coding unknown_likely_coding MGP_CBAJ_T0002540.1 MGP_CBAJ_G0002443.1 mouse_genomes_project 14 52092535 52092569 + TR_J_pseudogene TR_J_pseudogene MGP_CBAJ_T0039476.1 MGP_CBAJ_G0021174.1 mouse_genomes_project 14 62991820 63054393 + MGP_CBAJ_P0039476 Pinx1 protein_coding protein_coding MGP_CBAJ_T0101631.1 MGP_CBAJ_G0039662.1 mouse_genomes_project 14 12385449 12385597 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0039395.1 MGP_CBAJ_G0021141.1 mouse_genomes_project 14 59044530 59047242 + MGP_CBAJ_P0039395 Amer2 protein_coding protein_coding MGP_CBAJ_T0006567.1 MGP_CBAJ_G0005428.1 mouse_genomes_project 14 19040500 19041223 + lincRNA lincRNA MGP_CBAJ_T0006568.1 MGP_CBAJ_G0005428.1 mouse_genomes_project 14 19040521 19052755 + lincRNA lincRNA MGP_CBAJ_T0039685.1 MGP_CBAJ_G0021258.1 mouse_genomes_project 14 70382216 70496240 - MGP_CBAJ_P0039685 Xpo7 protein_coding protein_coding MGP_CBAJ_T0039686.1 MGP_CBAJ_G0021258.1 mouse_genomes_project 14 70382216 70496240 - MGP_CBAJ_P0039686 Xpo7 protein_coding protein_coding MGP_CBAJ_T0017125.1 MGP_CBAJ_G0015010.1 mouse_genomes_project 14 41360424 41506303 + processed_transcript processed_transcript MGP_CBAJ_T0017126.1 MGP_CBAJ_G0015010.1 mouse_genomes_project 14 41360707 41531227 + processed_transcript processed_transcript MGP_CBAJ_T0039868.1 MGP_CBAJ_G0021321.1 mouse_genomes_project 14 99239695 99241204 + MGP_CBAJ_P0039868 4921530L21Rik protein_coding protein_coding MGP_CBAJ_T0002511.1 MGP_CBAJ_G0002416.1 mouse_genomes_project 14 52094567 52094626 + MGP_CBAJ_P0002511 Traj11 TR_J_gene TR_J_gene MGP_CBAJ_T0039896.1 MGP_CBAJ_G0021333.1 mouse_genomes_project 14 105792112 105843942 + MGP_CBAJ_P0039896 Uchl3 protein_coding protein_coding MGP_CBAJ_T0040013.1 MGP_CBAJ_G0021376.1 mouse_genomes_project 14 129080997 129237201 + MGP_CBAJ_P0040013 Ubac2 protein_coding protein_coding MGP_CBAJ_T0000870.1 MGP_CBAJ_G0000805.1 mouse_genomes_project 14 16045364 16065635 + TEC TEC MGP_CBAJ_T0006636.1 MGP_CBAJ_G0005477.1 mouse_genomes_project 14 124778523 124787855 + Gm26773 lincRNA lincRNA MGP_CBAJ_T0038264.1 MGP_CBAJ_G0020794.1 mouse_genomes_project 14 22140611 22200154 + MGP_CBAJ_P0038264 Fam208a protein_coding protein_coding MGP_CBAJ_T0098282.1 MGP_CBAJ_G0036551.1 mouse_genomes_project 14 128331435 128336703 + B930095G15Rik sense_intronic sense_intronic MGP_CBAJ_T0039313.1 MGP_CBAJ_G0021116.1 mouse_genomes_project 14 55747674 55868441 + MGP_CBAJ_P0039313 Ift88 protein_coding protein_coding MGP_CBAJ_T0039314.1 MGP_CBAJ_G0021116.1 mouse_genomes_project 14 55747692 55767221 + MGP_CBAJ_P0039314 Ift88 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039315.1 MGP_CBAJ_G0021116.1 mouse_genomes_project 14 55747718 55868441 + Ift88 protein_coding retained_intron MGP_CBAJ_T0039316.1 MGP_CBAJ_G0021116.1 mouse_genomes_project 14 55771888 55824637 + MGP_CBAJ_P0039316 Ift88 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039317.1 MGP_CBAJ_G0021116.1 mouse_genomes_project 14 55826313 55834278 + Ift88 protein_coding retained_intron MGP_CBAJ_T0039284.1 MGP_CBAJ_G0021098.1 mouse_genomes_project 14 54322058 54330841 - MGP_CBAJ_P0039284 Gzmn protein_coding protein_coding MGP_CBAJ_T0017160.1 MGP_CBAJ_G0015020.1 mouse_genomes_project 14 78670500 78696686 + Gm19301 processed_transcript processed_transcript MGP_CBAJ_T0100115.1 MGP_CBAJ_G0038370.1 mouse_genomes_project 14 67814110 67814232 - Gm22319 snoRNA snoRNA MGP_CBAJ_T0098861.1 MGP_CBAJ_G0037116.1 mouse_genomes_project 14 101658015 101658179 - Gm25831 snRNA snRNA MGP_CBAJ_T0002573.1 MGP_CBAJ_G0002466.1 mouse_genomes_project 14 50501637 51570852 + MGP_CBAJ_P0002573 TR_V_gene TR_V_gene MGP_CBAJ_T0002535.1 MGP_CBAJ_G0002438.1 mouse_genomes_project 14 52040617 52040671 + TR_J_pseudogene TR_J_pseudogene MGP_CBAJ_T0017174.1 MGP_CBAJ_G0015027.1 mouse_genomes_project 14 125894768 125911897 + Gm16835 processed_transcript processed_transcript MGP_CBAJ_T0017151.1 MGP_CBAJ_G0015018.1 mouse_genomes_project 14 73135733 73149158 - Gm17233 processed_transcript processed_transcript MGP_CBAJ_T0009867.1 MGP_CBAJ_G0008005.1 mouse_genomes_project 14 54219910 54219978 - Mir6949 miRNA miRNA MGP_CBAJ_T0002507.1 MGP_CBAJ_G0002412.1 mouse_genomes_project 14 52090558 52090619 + MGP_CBAJ_P0002507 Traj16 TR_J_gene TR_J_gene MGP_CBAJ_T0038763.1 MGP_CBAJ_G0020932.1 mouse_genomes_project 14 46273199 46291114 + MGP_CBAJ_P0038763 Naa30 protein_coding protein_coding MGP_CBAJ_T0038764.1 MGP_CBAJ_G0020932.1 mouse_genomes_project 14 46273218 46287771 + MGP_CBAJ_P0038764 Naa30 protein_coding protein_coding MGP_CBAJ_T0038765.1 MGP_CBAJ_G0020932.1 mouse_genomes_project 14 46278495 46289456 + Naa30 protein_coding retained_intron MGP_CBAJ_T0038766.1 MGP_CBAJ_G0020932.1 mouse_genomes_project 14 46279116 46288338 + Naa30 protein_coding retained_intron MGP_CBAJ_T0039319.1 MGP_CBAJ_G0021118.1 mouse_genomes_project 14 55906792 55938734 - MGP_CBAJ_P0039319 Eef1akmt1 protein_coding protein_coding MGP_CBAJ_T0100131.1 MGP_CBAJ_G0038386.1 mouse_genomes_project 14 104442495 104442627 + Gm26367 snoRNA snoRNA MGP_CBAJ_T0038292.1 MGP_CBAJ_G0020806.1 mouse_genomes_project 14 25565709 25566487 + Tkt protein_coding processed_transcript MGP_CBAJ_T0038293.1 MGP_CBAJ_G0020806.1 mouse_genomes_project 14 25566481 25595094 + MGP_CBAJ_P0038293 Tkt protein_coding protein_coding MGP_CBAJ_T0038294.1 MGP_CBAJ_G0020806.1 mouse_genomes_project 14 25566531 25579664 + Tkt protein_coding retained_intron MGP_CBAJ_T0038295.1 MGP_CBAJ_G0020806.1 mouse_genomes_project 14 25566561 25577868 + MGP_CBAJ_P0038295 Tkt protein_coding nonsense_mediated_decay MGP_CBAJ_T0038296.1 MGP_CBAJ_G0020806.1 mouse_genomes_project 14 25586559 25587875 + Tkt protein_coding retained_intron MGP_CBAJ_T0009872.1 MGP_CBAJ_G0008010.1 mouse_genomes_project 14 61786862 61786999 + Mir8098 miRNA miRNA MGP_CBAJ_T0039266.1 MGP_CBAJ_G0021083.1 mouse_genomes_project 14 53935911 53945046 + MGP_CBAJ_P0039266 Nfatc4 protein_coding protein_coding MGP_CBAJ_T0039267.1 MGP_CBAJ_G0021083.1 mouse_genomes_project 14 53935911 53945046 + MGP_CBAJ_P0039267 Nfatc4 protein_coding protein_coding MGP_CBAJ_T0097949.1 MGP_CBAJ_G0036222.1 mouse_genomes_project 14 61832403 61832522 + n-R5s47 rRNA rRNA MGP_CBAJ_T0012879.1 MGP_CBAJ_G0010991.1 mouse_genomes_project 14 119616019 119616461 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0040008.1 MGP_CBAJ_G0021374.1 mouse_genomes_project 14 128593714 128650880 - MGP_CBAJ_P0040008 Slc15a1 protein_coding protein_coding MGP_CBAJ_T0038699.1 MGP_CBAJ_G0020920.1 mouse_genomes_project 14 44112753 44138021 + MGP_CBAJ_P0038699 Socs4 protein_coding protein_coding MGP_CBAJ_T0039735.1 MGP_CBAJ_G0021267.1 mouse_genomes_project 14 73332421 73359590 - MGP_CBAJ_P0039735 Itm2b protein_coding unknown_likely_coding MGP_CBAJ_T0039736.1 MGP_CBAJ_G0021267.1 mouse_genomes_project 14 73332423 73359579 - MGP_CBAJ_P0039736 Itm2b protein_coding protein_coding MGP_CBAJ_T0006629.1 MGP_CBAJ_G0005472.1 mouse_genomes_project 14 78042636 78072407 - Gm6994 lincRNA lincRNA MGP_CBAJ_T0006630.1 MGP_CBAJ_G0005472.1 mouse_genomes_project 14 78043259 78066940 - Gm6994 lincRNA lincRNA MGP_CBAJ_T0038285.1 MGP_CBAJ_G0020803.1 mouse_genomes_project 14 24957859 24989273 + MGP_CBAJ_P0038285 Chdh protein_coding protein_coding MGP_CBAJ_T0038286.1 MGP_CBAJ_G0020803.1 mouse_genomes_project 14 24958007 24976023 + Chdh protein_coding processed_transcript MGP_CBAJ_T0038287.1 MGP_CBAJ_G0020803.1 mouse_genomes_project 14 24971457 24987056 + MGP_CBAJ_P0038287 Chdh protein_coding protein_coding MGP_CBAJ_T0009864.1 MGP_CBAJ_G0008002.1 mouse_genomes_project 14 52581339 52581401 - Mir6948 miRNA miRNA MGP_CBAJ_T0038594.1 MGP_CBAJ_G0020884.1 mouse_genomes_project 14 32625621 32726784 - MGP_CBAJ_P0038594 Ccser2 protein_coding protein_coding MGP_CBAJ_T0038595.1 MGP_CBAJ_G0020884.1 mouse_genomes_project 14 32625621 32726694 - MGP_CBAJ_P0038595 Ccser2 protein_coding protein_coding MGP_CBAJ_T0038596.1 MGP_CBAJ_G0020884.1 mouse_genomes_project 14 32629525 32659094 - Ccser2 protein_coding processed_transcript MGP_CBAJ_T0038597.1 MGP_CBAJ_G0020884.1 mouse_genomes_project 14 32629526 32691201 - MGP_CBAJ_P0038597 Ccser2 protein_coding protein_coding MGP_CBAJ_T0038598.1 MGP_CBAJ_G0020884.1 mouse_genomes_project 14 32629781 32661901 - MGP_CBAJ_P0038598 Ccser2 protein_coding protein_coding MGP_CBAJ_T0038599.1 MGP_CBAJ_G0020884.1 mouse_genomes_project 14 32629828 32672578 - MGP_CBAJ_P0038599 Ccser2 protein_coding protein_coding MGP_CBAJ_T0038600.1 MGP_CBAJ_G0020884.1 mouse_genomes_project 14 32630044 32672780 - MGP_CBAJ_P0038600 Ccser2 protein_coding protein_coding MGP_CBAJ_T0038601.1 MGP_CBAJ_G0020884.1 mouse_genomes_project 14 32630203 32680098 - MGP_CBAJ_P0038601 Ccser2 protein_coding protein_coding MGP_CBAJ_T0038602.1 MGP_CBAJ_G0020884.1 mouse_genomes_project 14 32630255 32636944 - Ccser2 protein_coding retained_intron MGP_CBAJ_T0038603.1 MGP_CBAJ_G0020884.1 mouse_genomes_project 14 32651404 32695574 - Ccser2 protein_coding processed_transcript MGP_CBAJ_T0039028.1 MGP_CBAJ_G0021021.1 mouse_genomes_project 14 52394519 52398829 + MGP_CBAJ_P0039028 Rem2 protein_coding protein_coding MGP_CBAJ_T0039029.1 MGP_CBAJ_G0021021.1 mouse_genomes_project 14 52394661 52396316 + Rem2 protein_coding retained_intron MGP_CBAJ_T0039030.1 MGP_CBAJ_G0021021.1 mouse_genomes_project 14 52394673 52398075 + MGP_CBAJ_P0039030 Rem2 protein_coding protein_coding MGP_CBAJ_T0039031.1 MGP_CBAJ_G0021021.1 mouse_genomes_project 14 52395892 52397513 + MGP_CBAJ_P0039031 Rem2 protein_coding protein_coding MGP_CBAJ_T0098837.1 MGP_CBAJ_G0037092.1 mouse_genomes_project 14 45746588 45746695 - Gm25380 snRNA snRNA MGP_CBAJ_T0039831.1 MGP_CBAJ_G0021306.1 mouse_genomes_project 14 80176956 80206637 + MGP_CBAJ_P0039831 Mtrf1 protein_coding protein_coding MGP_CBAJ_T0039514.1 MGP_CBAJ_G0021193.1 mouse_genomes_project 14 65147219 65162958 + MGP_CBAJ_P0039514 Pbk protein_coding protein_coding MGP_CBAJ_T0039515.1 MGP_CBAJ_G0021193.1 mouse_genomes_project 14 65147319 65155331 + Pbk protein_coding processed_transcript MGP_CBAJ_T0039516.1 MGP_CBAJ_G0021193.1 mouse_genomes_project 14 65147424 65159636 + MGP_CBAJ_P0039516 Pbk protein_coding unknown_likely_coding MGP_CBAJ_T0039517.1 MGP_CBAJ_G0021193.1 mouse_genomes_project 14 65147614 65156097 + MGP_CBAJ_P0039517 Pbk protein_coding protein_coding MGP_CBAJ_T0000872.1 MGP_CBAJ_G0000807.1 mouse_genomes_project 14 42741975 42774343 - TEC TEC MGP_CBAJ_T0002472.1 MGP_CBAJ_G0002379.1 mouse_genomes_project 14 52052141 52052204 + MGP_CBAJ_P0002472 Traj50 TR_J_gene TR_J_gene MGP_CBAJ_T0038857.1 MGP_CBAJ_G0020988.1 mouse_genomes_project 14 49334504 49335372 + MGP_CBAJ_P0038857 Ear6 protein_coding protein_coding MGP_CBAJ_T0038858.1 MGP_CBAJ_G0020988.1 mouse_genomes_project 14 49334573 49335372 + MGP_CBAJ_P0038858 Ear6 protein_coding protein_coding MGP_CBAJ_T0006641.1 MGP_CBAJ_G0005482.1 mouse_genomes_project 14 127347927 127352601 - Gm26679 lincRNA lincRNA MGP_CBAJ_T0098838.1 MGP_CBAJ_G0037093.1 mouse_genomes_project 14 45829025 45829130 - Gm22699 snRNA snRNA MGP_CBAJ_T0039573.1 MGP_CBAJ_G0021211.1 mouse_genomes_project 14 66524854 66591935 - MGP_CBAJ_P0039573 Ppp2r2a protein_coding protein_coding MGP_CBAJ_T0039679.1 MGP_CBAJ_G0021254.1 mouse_genomes_project 14 70299182 70320305 - MGP_CBAJ_P0039679 Fam160b2 protein_coding protein_coding MGP_CBAJ_T0012807.1 MGP_CBAJ_G0010919.1 mouse_genomes_project 14 11574459 11575337 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012817.1 MGP_CBAJ_G0010929.1 mouse_genomes_project 14 20409389 20410578 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000874.1 MGP_CBAJ_G0000809.1 mouse_genomes_project 14 48223772 48225221 - TEC TEC MGP_CBAJ_T0002487.1 MGP_CBAJ_G0002392.1 mouse_genomes_project 14 52066003 52066063 + MGP_CBAJ_P0002487 Traj37 TR_J_gene TR_J_gene MGP_CBAJ_T0003485.1 MGP_CBAJ_G0003169.1 mouse_genomes_project 14 55857248 55861340 - Ift88os antisense antisense MGP_CBAJ_T0012822.1 MGP_CBAJ_G0010934.1 mouse_genomes_project 14 21178514 21179137 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003459.1 MGP_CBAJ_G0003147.1 mouse_genomes_project 14 21289890 21290388 + 9930004E17Rik antisense antisense MGP_CBAJ_T0037960.1 MGP_CBAJ_G0020710.1 mouse_genomes_project 14 7345524 7354501 + MGP_CBAJ_P0037960 Il3ra protein_coding unknown_likely_coding MGP_CBAJ_T0040014.1 MGP_CBAJ_G0021377.1 mouse_genomes_project 14 129115614 129119943 - MGP_CBAJ_P0040014 Gpr18 protein_coding protein_coding MGP_CBAJ_T0098846.1 MGP_CBAJ_G0037101.1 mouse_genomes_project 14 53784034 53784118 - Gm25887 snRNA snRNA MGP_CBAJ_T0039567.1 MGP_CBAJ_G0021210.1 mouse_genomes_project 14 66489865 66519606 - MGP_CBAJ_P0039567 Bnip3l protein_coding protein_coding MGP_CBAJ_T0039568.1 MGP_CBAJ_G0021210.1 mouse_genomes_project 14 66489865 66519627 - MGP_CBAJ_P0039568 Bnip3l protein_coding protein_coding MGP_CBAJ_T0039569.1 MGP_CBAJ_G0021210.1 mouse_genomes_project 14 66497581 66508238 - Bnip3l protein_coding processed_transcript MGP_CBAJ_T0039570.1 MGP_CBAJ_G0021210.1 mouse_genomes_project 14 66497760 66508841 - Bnip3l protein_coding processed_transcript MGP_CBAJ_T0039571.1 MGP_CBAJ_G0021210.1 mouse_genomes_project 14 66497769 66508061 - Bnip3l protein_coding processed_transcript MGP_CBAJ_T0039572.1 MGP_CBAJ_G0021210.1 mouse_genomes_project 14 66501883 66507993 - Bnip3l protein_coding retained_intron MGP_CBAJ_T0039294.1 MGP_CBAJ_G0021106.1 mouse_genomes_project 14 54874939 54906796 + MGP_CBAJ_P0039294 Mphosph8 protein_coding protein_coding MGP_CBAJ_T0039295.1 MGP_CBAJ_G0021106.1 mouse_genomes_project 14 54881598 54883344 + Mphosph8 protein_coding processed_transcript MGP_CBAJ_T0039296.1 MGP_CBAJ_G0021106.1 mouse_genomes_project 14 54897746 54900615 + Mphosph8 protein_coding processed_transcript MGP_CBAJ_T0039297.1 MGP_CBAJ_G0021106.1 mouse_genomes_project 14 54902503 54906793 + Mphosph8 protein_coding processed_transcript MGP_CBAJ_T0039298.1 MGP_CBAJ_G0021106.1 mouse_genomes_project 14 54902789 54906794 + Mphosph8 protein_coding processed_transcript MGP_CBAJ_T0000876.1 MGP_CBAJ_G0000811.1 mouse_genomes_project 14 49931377 49933719 - TEC TEC MGP_CBAJ_T0038280.1 MGP_CBAJ_G0020802.1 mouse_genomes_project 14 24944980 24957650 - MGP_CBAJ_P0038280 Il17rb protein_coding nonsense_mediated_decay MGP_CBAJ_T0038281.1 MGP_CBAJ_G0020802.1 mouse_genomes_project 14 24945007 24957733 - MGP_CBAJ_P0038281 Il17rb protein_coding protein_coding MGP_CBAJ_T0038282.1 MGP_CBAJ_G0020802.1 mouse_genomes_project 14 24945007 24957733 - MGP_CBAJ_P0038282 Il17rb protein_coding protein_coding MGP_CBAJ_T0038283.1 MGP_CBAJ_G0020802.1 mouse_genomes_project 14 24945038 24957646 - MGP_CBAJ_P0038283 Il17rb protein_coding nonsense_mediated_decay MGP_CBAJ_T0038284.1 MGP_CBAJ_G0020802.1 mouse_genomes_project 14 24945463 24957628 - MGP_CBAJ_P0038284 Il17rb protein_coding unknown_likely_coding MGP_CBAJ_T0002473.1 MGP_CBAJ_G0002380.1 mouse_genomes_project 14 52053237 52053299 + MGP_CBAJ_P0002473 Traj49 TR_J_gene TR_J_gene MGP_CBAJ_T0002474.1 MGP_CBAJ_G0002380.1 mouse_genomes_project 14 52053237 52053296 + Traj49 TR_J_gene processed_transcript MGP_CBAJ_T0098876.1 MGP_CBAJ_G0037131.1 mouse_genomes_project 14 127816653 127816737 + Gm25781 snRNA snRNA MGP_CBAJ_T0006564.1 MGP_CBAJ_G0005426.1 mouse_genomes_project 14 19025068 19035680 - lincRNA lincRNA MGP_CBAJ_T0006565.1 MGP_CBAJ_G0005426.1 mouse_genomes_project 14 19033486 19035673 - lincRNA lincRNA MGP_CBAJ_T0038078.1 MGP_CBAJ_G0020752.1 mouse_genomes_project 14 15046648 15067653 - MGP_CBAJ_P0038078 Ap3m1 protein_coding protein_coding MGP_CBAJ_T0038079.1 MGP_CBAJ_G0020752.1 mouse_genomes_project 14 15046665 15049773 - Ap3m1 protein_coding processed_transcript MGP_CBAJ_T0038080.1 MGP_CBAJ_G0020752.1 mouse_genomes_project 14 15046740 15049987 - Ap3m1 protein_coding processed_transcript MGP_CBAJ_T0038081.1 MGP_CBAJ_G0020752.1 mouse_genomes_project 14 15051220 15067425 - MGP_CBAJ_P0038081 Ap3m1 protein_coding protein_coding MGP_CBAJ_T0038082.1 MGP_CBAJ_G0020752.1 mouse_genomes_project 14 15053337 15067390 - MGP_CBAJ_P0038082 Ap3m1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038083.1 MGP_CBAJ_G0020752.1 mouse_genomes_project 14 15053381 15067666 - Ap3m1 protein_coding processed_transcript MGP_CBAJ_T0038084.1 MGP_CBAJ_G0020752.1 mouse_genomes_project 14 15056195 15067280 - Ap3m1 protein_coding processed_transcript MGP_CBAJ_T0038085.1 MGP_CBAJ_G0020752.1 mouse_genomes_project 14 15056222 15067711 - MGP_CBAJ_P0038085 Ap3m1 protein_coding protein_coding MGP_CBAJ_T0038086.1 MGP_CBAJ_G0020752.1 mouse_genomes_project 14 15059859 15067323 - MGP_CBAJ_P0038086 Ap3m1 protein_coding protein_coding MGP_CBAJ_T0009869.1 MGP_CBAJ_G0008007.1 mouse_genomes_project 14 58881583 58881693 - Mir719 miRNA miRNA MGP_CBAJ_T0009903.1 MGP_CBAJ_G0008041.1 mouse_genomes_project 14 125318371 125318475 - Mir6391 miRNA miRNA MGP_CBAJ_T0011250.1 MGP_CBAJ_G0009388.1 mouse_genomes_project 14 60459196 60459281 + Gm27747 misc_RNA misc_RNA MGP_CBAJ_T0002537.1 MGP_CBAJ_G0002440.1 mouse_genomes_project 14 52046651 52046705 + TR_J_pseudogene TR_J_pseudogene MGP_CBAJ_T0038045.1 MGP_CBAJ_G0020738.1 mouse_genomes_project 14 14398488 14435559 - MGP_CBAJ_P0038045 Anxa7 protein_coding protein_coding MGP_CBAJ_T0038046.1 MGP_CBAJ_G0020738.1 mouse_genomes_project 14 14398488 14435559 - MGP_CBAJ_P0038046 Anxa7 protein_coding protein_coding MGP_CBAJ_T0038047.1 MGP_CBAJ_G0020738.1 mouse_genomes_project 14 14398505 14435385 - MGP_CBAJ_P0038047 Anxa7 protein_coding unknown_likely_coding MGP_CBAJ_T0000886.1 MGP_CBAJ_G0000821.1 mouse_genomes_project 14 69056539 69061081 - TEC TEC MGP_CBAJ_T0037964.1 MGP_CBAJ_G0020713.1 mouse_genomes_project 14 7853204 8129075 + MGP_CBAJ_P0037964 Nek10 protein_coding unknown_likely_coding MGP_CBAJ_T0037965.1 MGP_CBAJ_G0020713.1 mouse_genomes_project 14 7876445 8124180 + MGP_CBAJ_P0037965 Nek10 protein_coding protein_coding MGP_CBAJ_T0037966.1 MGP_CBAJ_G0020713.1 mouse_genomes_project 14 7876495 8129075 + MGP_CBAJ_P0037966 Nek10 protein_coding protein_coding MGP_CBAJ_T0037967.1 MGP_CBAJ_G0020713.1 mouse_genomes_project 14 7933067 8072027 + Nek10 protein_coding processed_transcript MGP_CBAJ_T0037968.1 MGP_CBAJ_G0020713.1 mouse_genomes_project 14 7937351 8086742 + Nek10 protein_coding retained_intron MGP_CBAJ_T0037969.1 MGP_CBAJ_G0020713.1 mouse_genomes_project 14 8030944 8129125 + MGP_CBAJ_P0037969 Nek10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0006614.1 MGP_CBAJ_G0005462.1 mouse_genomes_project 14 61382525 61385984 - lincRNA lincRNA MGP_CBAJ_T0006615.1 MGP_CBAJ_G0005462.1 mouse_genomes_project 14 61383947 61399988 - lincRNA lincRNA MGP_CBAJ_T0017120.1 MGP_CBAJ_G0015006.1 mouse_genomes_project 14 13313542 13315440 + processed_transcript processed_transcript MGP_CBAJ_T0098859.1 MGP_CBAJ_G0037114.1 mouse_genomes_project 14 95923697 95923859 - Gm23509 snRNA snRNA MGP_CBAJ_T0098873.1 MGP_CBAJ_G0037128.1 mouse_genomes_project 14 117854469 117854561 - Gm22764 snRNA snRNA MGP_CBAJ_T0039348.1 MGP_CBAJ_G0021125.1 mouse_genomes_project 14 56329606 56421140 - MGP_CBAJ_P0039348 Micu2 protein_coding protein_coding MGP_CBAJ_T0039043.1 MGP_CBAJ_G0021027.1 mouse_genomes_project 14 52563768 52567930 + MGP_CBAJ_P0039043 Psmb11 protein_coding protein_coding MGP_CBAJ_T0039371.1 MGP_CBAJ_G0021131.1 mouse_genomes_project 14 57765491 57954519 - MGP_CBAJ_P0039371 Phf11c protein_coding protein_coding MGP_CBAJ_T0017144.1 MGP_CBAJ_G0015013.1 mouse_genomes_project 14 65714819 65716612 - 1700001G11Rik processed_transcript processed_transcript MGP_CBAJ_T0017145.1 MGP_CBAJ_G0015013.1 mouse_genomes_project 14 65714820 65716423 - 1700001G11Rik processed_transcript processed_transcript MGP_CBAJ_T0017146.1 MGP_CBAJ_G0015013.1 mouse_genomes_project 14 65714980 65716366 - 1700001G11Rik processed_transcript processed_transcript MGP_CBAJ_T0006583.1 MGP_CBAJ_G0005438.1 mouse_genomes_project 14 30276471 30283071 + A930038B10Rik lincRNA lincRNA MGP_CBAJ_T0006584.1 MGP_CBAJ_G0005438.1 mouse_genomes_project 14 30277296 30287610 + A930038B10Rik lincRNA lincRNA MGP_CBAJ_T0038510.1 MGP_CBAJ_G0020849.1 mouse_genomes_project 14 27787809 27858439 + MGP_CBAJ_P0038510 Ercc6 protein_coding protein_coding MGP_CBAJ_T0002518.1 MGP_CBAJ_G0002423.1 mouse_genomes_project 14 52105785 52105851 + MGP_CBAJ_P0002518 Traj2 TR_J_gene TR_J_gene MGP_CBAJ_T0038197.1 MGP_CBAJ_G0020775.1 mouse_genomes_project 14 20393604 20397041 - MGP_CBAJ_P0038197 protein_coding protein_coding MGP_CBAJ_T0038198.1 MGP_CBAJ_G0020775.1 mouse_genomes_project 14 20393608 20396647 - MGP_CBAJ_P0038198 protein_coding protein_coding MGP_CBAJ_T0039778.1 MGP_CBAJ_G0021284.1 mouse_genomes_project 14 76066164 76093076 - MGP_CBAJ_P0039778 Slc25a30 protein_coding protein_coding MGP_CBAJ_T0038170.1 MGP_CBAJ_G0020766.1 mouse_genomes_project 14 18898370 18903121 + MGP_CBAJ_P0038170 Rps24 protein_coding protein_coding MGP_CBAJ_T0038171.1 MGP_CBAJ_G0020766.1 mouse_genomes_project 14 18898370 18903835 + MGP_CBAJ_P0038171 Rps24 protein_coding protein_coding MGP_CBAJ_T0039860.1 MGP_CBAJ_G0021320.1 mouse_genomes_project 14 95790787 96805124 - MGP_CBAJ_P0039860 Pcdh9 protein_coding protein_coding MGP_CBAJ_T0039861.1 MGP_CBAJ_G0021320.1 mouse_genomes_project 14 95791079 96805124 - MGP_CBAJ_P0039861 Pcdh9 protein_coding protein_coding MGP_CBAJ_T0039862.1 MGP_CBAJ_G0021320.1 mouse_genomes_project 14 95791353 96805084 - MGP_CBAJ_P0039862 Pcdh9 protein_coding protein_coding MGP_CBAJ_T0039863.1 MGP_CBAJ_G0021320.1 mouse_genomes_project 14 95791580 96804613 - MGP_CBAJ_P0039863 Pcdh9 protein_coding protein_coding MGP_CBAJ_T0039864.1 MGP_CBAJ_G0021320.1 mouse_genomes_project 14 95792894 96803194 - MGP_CBAJ_P0039864 Pcdh9 protein_coding protein_coding MGP_CBAJ_T0039865.1 MGP_CBAJ_G0021320.1 mouse_genomes_project 14 95968970 96800210 - MGP_CBAJ_P0039865 Pcdh9 protein_coding protein_coding MGP_CBAJ_T0039866.1 MGP_CBAJ_G0021320.1 mouse_genomes_project 14 96800029 96800686 - Pcdh9 protein_coding retained_intron MGP_CBAJ_T0039867.1 MGP_CBAJ_G0021320.1 mouse_genomes_project 14 96800574 96805134 - MGP_CBAJ_P0039867 Pcdh9 protein_coding protein_coding MGP_CBAJ_T0097773.1 MGP_CBAJ_G0036046.1 mouse_genomes_project 14 107190816 107195123 - pseudogene pseudogene MGP_CBAJ_T0012819.1 MGP_CBAJ_G0010931.1 mouse_genomes_project 14 20409394 20410616 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009848.1 MGP_CBAJ_G0007986.1 mouse_genomes_project 14 11672238 11672317 + Gm44469 miRNA miRNA MGP_CBAJ_T0039504.1 MGP_CBAJ_G0021187.1 mouse_genomes_project 14 64540423 64588189 + MGP_CBAJ_P0039504 Fbxo16 protein_coding protein_coding MGP_CBAJ_T0039505.1 MGP_CBAJ_G0021187.1 mouse_genomes_project 14 64544459 64588113 + MGP_CBAJ_P0039505 Fbxo16 protein_coding unknown_likely_coding MGP_CBAJ_T0017179.1 MGP_CBAJ_G0015030.1 mouse_genomes_project 14 130244678 130259338 + 4930594M22Rik processed_transcript processed_transcript MGP_CBAJ_T0017180.1 MGP_CBAJ_G0015030.1 mouse_genomes_project 14 130244715 130261090 + 4930594M22Rik processed_transcript processed_transcript MGP_CBAJ_T0017181.1 MGP_CBAJ_G0015030.1 mouse_genomes_project 14 130244723 130269117 + 4930594M22Rik processed_transcript processed_transcript MGP_CBAJ_T0039850.1 MGP_CBAJ_G0021316.1 mouse_genomes_project 14 86025206 86117819 + MGP_CBAJ_P0039850 Pcdh17 protein_coding protein_coding MGP_CBAJ_T0039953.1 MGP_CBAJ_G0021348.1 mouse_genomes_project 14 110425725 110430556 - MGP_CBAJ_P0039953 Spry2 protein_coding protein_coding MGP_CBAJ_T0039483.1 MGP_CBAJ_G0021179.1 mouse_genomes_project 14 63247554 63260989 + MGP_CBAJ_P0039483 Prss51 protein_coding protein_coding MGP_CBAJ_T0039484.1 MGP_CBAJ_G0021179.1 mouse_genomes_project 14 63256989 63260985 + MGP_CBAJ_P0039484 Prss51 protein_coding protein_coding MGP_CBAJ_T0039485.1 MGP_CBAJ_G0021179.1 mouse_genomes_project 14 63257019 63260428 + MGP_CBAJ_P0039485 Prss51 protein_coding protein_coding MGP_CBAJ_T0038847.1 MGP_CBAJ_G0020979.1 mouse_genomes_project 14 48369100 48374883 + MGP_CBAJ_P0038847 protein_coding protein_coding MGP_CBAJ_T0038848.1 MGP_CBAJ_G0020979.1 mouse_genomes_project 14 48374281 48374719 + MGP_CBAJ_P0038848 protein_coding protein_coding MGP_CBAJ_T0038037.1 MGP_CBAJ_G0020737.1 mouse_genomes_project 14 14335845 14395453 - MGP_CBAJ_P0038037 Cfap70 protein_coding protein_coding MGP_CBAJ_T0038038.1 MGP_CBAJ_G0020737.1 mouse_genomes_project 14 14335845 14395453 - MGP_CBAJ_P0038038 Cfap70 protein_coding protein_coding MGP_CBAJ_T0038039.1 MGP_CBAJ_G0020737.1 mouse_genomes_project 14 14335845 14395453 - MGP_CBAJ_P0038039 Cfap70 protein_coding protein_coding MGP_CBAJ_T0038040.1 MGP_CBAJ_G0020737.1 mouse_genomes_project 14 14335848 14395450 - MGP_CBAJ_P0038040 Cfap70 protein_coding protein_coding MGP_CBAJ_T0038041.1 MGP_CBAJ_G0020737.1 mouse_genomes_project 14 14367792 14395454 - Cfap70 protein_coding retained_intron MGP_CBAJ_T0038042.1 MGP_CBAJ_G0020737.1 mouse_genomes_project 14 14368300 14372128 - Cfap70 protein_coding processed_transcript MGP_CBAJ_T0038043.1 MGP_CBAJ_G0020737.1 mouse_genomes_project 14 14381821 14395451 - MGP_CBAJ_P0038043 Cfap70 protein_coding protein_coding MGP_CBAJ_T0038044.1 MGP_CBAJ_G0020737.1 mouse_genomes_project 14 14389526 14391937 - Cfap70 protein_coding retained_intron MGP_CBAJ_T0038814.1 MGP_CBAJ_G0020968.1 mouse_genomes_project 14 48172772 48197778 - MGP_CBAJ_P0038814 Osgep protein_coding nonsense_mediated_decay MGP_CBAJ_T0038815.1 MGP_CBAJ_G0020968.1 mouse_genomes_project 14 48179827 48197837 - MGP_CBAJ_P0038815 Osgep protein_coding protein_coding MGP_CBAJ_T0038816.1 MGP_CBAJ_G0020968.1 mouse_genomes_project 14 48183859 48197774 - MGP_CBAJ_P0038816 Osgep protein_coding nonsense_mediated_decay MGP_CBAJ_T0038817.1 MGP_CBAJ_G0020968.1 mouse_genomes_project 14 48183863 48197816 - MGP_CBAJ_P0038817 Osgep protein_coding nonsense_mediated_decay MGP_CBAJ_T0038818.1 MGP_CBAJ_G0020968.1 mouse_genomes_project 14 48183863 48197632 - MGP_CBAJ_P0038818 Osgep protein_coding protein_coding MGP_CBAJ_T0038819.1 MGP_CBAJ_G0020968.1 mouse_genomes_project 14 48183965 48185547 - Osgep protein_coding retained_intron MGP_CBAJ_T0038820.1 MGP_CBAJ_G0020968.1 mouse_genomes_project 14 48184868 48197570 - MGP_CBAJ_P0038820 Osgep protein_coding protein_coding MGP_CBAJ_T0038821.1 MGP_CBAJ_G0020968.1 mouse_genomes_project 14 48185268 48197787 - Osgep protein_coding retained_intron MGP_CBAJ_T0038537.1 MGP_CBAJ_G0020858.1 mouse_genomes_project 14 28757960 28828385 - MGP_CBAJ_P0038537 Mapk8 protein_coding protein_coding MGP_CBAJ_T0038538.1 MGP_CBAJ_G0020858.1 mouse_genomes_project 14 28761111 28828372 - MGP_CBAJ_P0038538 Mapk8 protein_coding protein_coding MGP_CBAJ_T0038539.1 MGP_CBAJ_G0020858.1 mouse_genomes_project 14 28762167 28828369 - MGP_CBAJ_P0038539 Mapk8 protein_coding protein_coding MGP_CBAJ_T0038540.1 MGP_CBAJ_G0020858.1 mouse_genomes_project 14 28762232 28790833 - MGP_CBAJ_P0038540 Mapk8 protein_coding protein_coding MGP_CBAJ_T0038541.1 MGP_CBAJ_G0020858.1 mouse_genomes_project 14 28762367 28770357 - Mapk8 protein_coding processed_transcript MGP_CBAJ_T0038542.1 MGP_CBAJ_G0020858.1 mouse_genomes_project 14 28762370 28790816 - MGP_CBAJ_P0038542 Mapk8 protein_coding protein_coding MGP_CBAJ_T0038543.1 MGP_CBAJ_G0020858.1 mouse_genomes_project 14 28763971 28769277 - Mapk8 protein_coding retained_intron MGP_CBAJ_T0038544.1 MGP_CBAJ_G0020858.1 mouse_genomes_project 14 28770986 28828385 - Mapk8 protein_coding retained_intron MGP_CBAJ_T0038545.1 MGP_CBAJ_G0020858.1 mouse_genomes_project 14 28786919 28828384 - Mapk8 protein_coding retained_intron MGP_CBAJ_T0009866.1 MGP_CBAJ_G0008004.1 mouse_genomes_project 14 52996354 52996431 - Mir208b miRNA miRNA MGP_CBAJ_T0038190.1 MGP_CBAJ_G0020773.1 mouse_genomes_project 14 20352052 20367149 - MGP_CBAJ_P0038190 protein_coding protein_coding MGP_CBAJ_T0038191.1 MGP_CBAJ_G0020773.1 mouse_genomes_project 14 20352435 20354931 - MGP_CBAJ_P0038191 protein_coding protein_coding MGP_CBAJ_T0038192.1 MGP_CBAJ_G0020773.1 mouse_genomes_project 14 20352435 20366523 - MGP_CBAJ_P0038192 protein_coding protein_coding MGP_CBAJ_T0038194.1 MGP_CBAJ_G0020773.1 mouse_genomes_project 14 20352479 20366525 - MGP_CBAJ_P0038194 protein_coding protein_coding MGP_CBAJ_T0002651.1 MGP_CBAJ_G0002531.1 mouse_genomes_project 14 50884034 50884328 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0039288.1 MGP_CBAJ_G0021102.1 mouse_genomes_project 14 54529810 54555454 + MGP_CBAJ_P0039288 Atp12a protein_coding protein_coding MGP_CBAJ_T0012823.1 MGP_CBAJ_G0010935.1 mouse_genomes_project 14 24077901 24078393 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012803.1 MGP_CBAJ_G0010915.1 mouse_genomes_project 14 2422498 2423102 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009856.1 MGP_CBAJ_G0007994.1 mouse_genomes_project 14 24935112 24935177 + Mir6947 miRNA miRNA MGP_CBAJ_T0039454.1 MGP_CBAJ_G0021166.1 mouse_genomes_project 14 62176425 62217702 - MGP_CBAJ_P0039454 Fdft1 protein_coding protein_coding MGP_CBAJ_T0039471.1 MGP_CBAJ_G0021173.1 mouse_genomes_project 14 62716412 62948893 + MGP_CBAJ_P0039471 Xkr6 protein_coding protein_coding MGP_CBAJ_T0039472.1 MGP_CBAJ_G0021173.1 mouse_genomes_project 14 62716584 62778016 + MGP_CBAJ_P0039472 Xkr6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039473.1 MGP_CBAJ_G0021173.1 mouse_genomes_project 14 62716935 62774643 + MGP_CBAJ_P0039473 Xkr6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039474.1 MGP_CBAJ_G0021173.1 mouse_genomes_project 14 62770990 62774931 + Xkr6 protein_coding processed_transcript MGP_CBAJ_T0039475.1 MGP_CBAJ_G0021173.1 mouse_genomes_project 14 62917338 62948103 + MGP_CBAJ_P0039475 Xkr6 protein_coding protein_coding MGP_CBAJ_T0039609.1 MGP_CBAJ_G0021229.1 mouse_genomes_project 14 69119390 69153237 + MGP_CBAJ_P0039609 protein_coding protein_coding MGP_CBAJ_T0039611.1 MGP_CBAJ_G0021229.1 mouse_genomes_project 14 69119406 69136442 + protein_coding retained_intron MGP_CBAJ_T0039612.1 MGP_CBAJ_G0021229.1 mouse_genomes_project 14 69119414 69136443 + MGP_CBAJ_P0039612 protein_coding protein_coding MGP_CBAJ_T0039613.1 MGP_CBAJ_G0021229.1 mouse_genomes_project 14 69119432 69133674 + protein_coding processed_transcript MGP_CBAJ_T0039615.1 MGP_CBAJ_G0021229.1 mouse_genomes_project 14 69148525 69152183 + protein_coding retained_intron MGP_CBAJ_T0039874.1 MGP_CBAJ_G0021325.1 mouse_genomes_project 14 102886480 102918010 + MGP_CBAJ_P0039874 Bora protein_coding protein_coding MGP_CBAJ_T0039877.1 MGP_CBAJ_G0021327.1 mouse_genomes_project 14 102940989 103119911 + MGP_CBAJ_P0039877 Pibf1 protein_coding protein_coding MGP_CBAJ_T0002491.1 MGP_CBAJ_G0002396.1 mouse_genomes_project 14 52070563 52070629 + MGP_CBAJ_P0002491 Traj32 TR_J_gene TR_J_gene MGP_CBAJ_T0038776.1 MGP_CBAJ_G0020935.1 mouse_genomes_project 14 46771109 46880548 - MGP_CBAJ_P0038776 3632451O06Rik protein_coding protein_coding MGP_CBAJ_T0038777.1 MGP_CBAJ_G0020935.1 mouse_genomes_project 14 46771217 46880536 - MGP_CBAJ_P0038777 3632451O06Rik protein_coding protein_coding MGP_CBAJ_T0040009.1 MGP_CBAJ_G0021375.1 mouse_genomes_project 14 128687315 128985342 - MGP_CBAJ_P0040009 Dock9 protein_coding protein_coding MGP_CBAJ_T0040010.1 MGP_CBAJ_G0021375.1 mouse_genomes_project 14 128687315 128871436 - MGP_CBAJ_P0040010 Dock9 protein_coding protein_coding MGP_CBAJ_T0040011.1 MGP_CBAJ_G0021375.1 mouse_genomes_project 14 128688779 128758341 - MGP_CBAJ_P0040011 Dock9 protein_coding unknown_likely_coding MGP_CBAJ_T0040012.1 MGP_CBAJ_G0021375.1 mouse_genomes_project 14 128760726 128924214 - MGP_CBAJ_P0040012 Dock9 protein_coding unknown_likely_coding MGP_CBAJ_T0009853.1 MGP_CBAJ_G0007991.1 mouse_genomes_project 14 20282824 20282934 - Gm23701 miRNA miRNA MGP_CBAJ_T0003461.1 MGP_CBAJ_G0003149.1 mouse_genomes_project 14 27540350 27542401 - Gm17210 antisense antisense MGP_CBAJ_T0039914.1 MGP_CBAJ_G0021336.1 mouse_genomes_project 14 107189177 107195232 - MGP_CBAJ_P0039914 Kctd12 protein_coding protein_coding MGP_CBAJ_T0039915.1 MGP_CBAJ_G0021336.1 mouse_genomes_project 14 107190133 107194146 - Kctd12 protein_coding processed_transcript MGP_CBAJ_T0039772.1 MGP_CBAJ_G0021281.1 mouse_genomes_project 14 75864940 75872828 - MGP_CBAJ_P0039772 Spert protein_coding protein_coding MGP_CBAJ_T0039773.1 MGP_CBAJ_G0021281.1 mouse_genomes_project 14 75864940 75873959 - MGP_CBAJ_P0039773 Spert protein_coding protein_coding MGP_CBAJ_T0039774.1 MGP_CBAJ_G0021281.1 mouse_genomes_project 14 75864940 75873959 - MGP_CBAJ_P0039774 Spert protein_coding protein_coding MGP_CBAJ_T0039775.1 MGP_CBAJ_G0021281.1 mouse_genomes_project 14 75864940 75872828 - MGP_CBAJ_P0039775 Spert protein_coding protein_coding MGP_CBAJ_T0012873.1 MGP_CBAJ_G0010985.1 mouse_genomes_project 14 103273722 103274063 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0038839.1 MGP_CBAJ_G0020973.1 mouse_genomes_project 14 48302987 48306400 - MGP_CBAJ_P0038839 Rnase9 protein_coding protein_coding MGP_CBAJ_T0002653.1 MGP_CBAJ_G0002533.1 mouse_genomes_project 14 51069762 51072612 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0100092.1 MGP_CBAJ_G0038347.1 mouse_genomes_project 14 26111582 26111662 - Snord69 snoRNA snoRNA MGP_CBAJ_T0039533.1 MGP_CBAJ_G0021199.1 mouse_genomes_project 14 65395143 65460763 - MGP_CBAJ_P0039533 Adam2 protein_coding protein_coding MGP_CBAJ_T0038550.1 MGP_CBAJ_G0020863.1 mouse_genomes_project 14 29368483 29378626 + MGP_CBAJ_P0038550 Rbp3 protein_coding protein_coding MGP_CBAJ_T0038790.1 MGP_CBAJ_G0020948.1 mouse_genomes_project 14 47488831 47489864 - MGP_CBAJ_P0038790 Olfr734 protein_coding protein_coding MGP_CBAJ_T0009870.1 MGP_CBAJ_G0008008.1 mouse_genomes_project 14 60444292 60444385 - Mir16-1 miRNA miRNA MGP_CBAJ_T0037989.1 MGP_CBAJ_G0020720.1 mouse_genomes_project 14 11684841 11715568 - MGP_CBAJ_P0037989 protein_coding unknown_likely_coding MGP_CBAJ_T0037929.1 MGP_CBAJ_G0020698.1 mouse_genomes_project 14 4234189 4982179 + MGP_CBAJ_P0037929 Ptprg protein_coding protein_coding MGP_CBAJ_T0037930.1 MGP_CBAJ_G0020698.1 mouse_genomes_project 14 4234210 4978921 + MGP_CBAJ_P0037930 Ptprg protein_coding nonsense_mediated_decay MGP_CBAJ_T0037931.1 MGP_CBAJ_G0020698.1 mouse_genomes_project 14 4234238 4681528 + Ptprg protein_coding retained_intron MGP_CBAJ_T0037932.1 MGP_CBAJ_G0020698.1 mouse_genomes_project 14 4815952 4854069 + MGP_CBAJ_P0037932 Ptprg protein_coding protein_coding MGP_CBAJ_T0037933.1 MGP_CBAJ_G0020698.1 mouse_genomes_project 14 4928639 4978920 + MGP_CBAJ_P0037933 Ptprg protein_coding protein_coding MGP_CBAJ_T0037934.1 MGP_CBAJ_G0020698.1 mouse_genomes_project 14 4957657 4962265 + Ptprg protein_coding processed_transcript MGP_CBAJ_T0002588.1 MGP_CBAJ_G0002481.1 mouse_genomes_project 14 51094553 51095165 + MGP_CBAJ_P0002588 TR_V_gene TR_V_gene MGP_CBAJ_T0039239.1 MGP_CBAJ_G0021069.1 mouse_genomes_project 14 53746006 53748364 + MGP_CBAJ_P0039239 Tssk4 protein_coding protein_coding MGP_CBAJ_T0039240.1 MGP_CBAJ_G0021069.1 mouse_genomes_project 14 53746008 53748364 + MGP_CBAJ_P0039240 Tssk4 protein_coding protein_coding MGP_CBAJ_T0039241.1 MGP_CBAJ_G0021069.1 mouse_genomes_project 14 53746173 53748273 + MGP_CBAJ_P0039241 Tssk4 protein_coding unknown_likely_coding MGP_CBAJ_T0037976.1 MGP_CBAJ_G0020716.1 mouse_genomes_project 14 9536552 9605908 + MGP_CBAJ_P0037976 Ngly1 protein_coding protein_coding MGP_CBAJ_T0037977.1 MGP_CBAJ_G0020716.1 mouse_genomes_project 14 9536599 9571758 + Ngly1 protein_coding retained_intron MGP_CBAJ_T0037978.1 MGP_CBAJ_G0020716.1 mouse_genomes_project 14 9569434 9571881 + Ngly1 protein_coding retained_intron MGP_CBAJ_T0002592.1 MGP_CBAJ_G0002485.1 mouse_genomes_project 14 51291353 51291884 + MGP_CBAJ_P0002592 TR_V_gene TR_V_gene MGP_CBAJ_T0038849.1 MGP_CBAJ_G0020980.1 mouse_genomes_project 14 48387399 48390622 + MGP_CBAJ_P0038849 Eddm3b protein_coding protein_coding MGP_CBAJ_T0002591.1 MGP_CBAJ_G0002484.1 mouse_genomes_project 14 51249284 51249837 + MGP_CBAJ_P0002591 TR_V_gene TR_V_gene MGP_CBAJ_T0038327.1 MGP_CBAJ_G0020811.1 mouse_genomes_project 14 25937974 25940337 + MGP_CBAJ_P0038327 Mustn1 protein_coding protein_coding MGP_CBAJ_T0039312.1 MGP_CBAJ_G0021115.1 mouse_genomes_project 14 55574945 55718637 - MGP_CBAJ_P0039312 Cryl1 protein_coding protein_coding MGP_CBAJ_T0038134.1 MGP_CBAJ_G0020761.1 mouse_genomes_project 14 16143705 17287196 + MGP_CBAJ_P0038134 1700112E06Rik protein_coding protein_coding MGP_CBAJ_T0038135.1 MGP_CBAJ_G0020761.1 mouse_genomes_project 14 16143814 17034659 + MGP_CBAJ_P0038135 1700112E06Rik protein_coding protein_coding MGP_CBAJ_T0038136.1 MGP_CBAJ_G0020761.1 mouse_genomes_project 14 16143841 17287196 + MGP_CBAJ_P0038136 1700112E06Rik protein_coding protein_coding MGP_CBAJ_T0038137.1 MGP_CBAJ_G0020761.1 mouse_genomes_project 14 16143841 16908851 + MGP_CBAJ_P0038137 1700112E06Rik protein_coding protein_coding MGP_CBAJ_T0038138.1 MGP_CBAJ_G0020761.1 mouse_genomes_project 14 16456643 16751403 + 1700112E06Rik protein_coding processed_transcript MGP_CBAJ_T0038139.1 MGP_CBAJ_G0020761.1 mouse_genomes_project 14 16744692 16770550 + 1700112E06Rik protein_coding processed_transcript MGP_CBAJ_T0040015.1 MGP_CBAJ_G0021378.1 mouse_genomes_project 14 129165528 129178415 - MGP_CBAJ_P0040015 Gpr183 protein_coding protein_coding MGP_CBAJ_T0100085.1 MGP_CBAJ_G0038340.1 mouse_genomes_project 14 3952516 3952648 + Gm25466 snoRNA snoRNA MGP_CBAJ_T0039664.1 MGP_CBAJ_G0021246.1 mouse_genomes_project 14 70141163 70145887 - MGP_CBAJ_P0039664 Polr3d protein_coding protein_coding MGP_CBAJ_T0039665.1 MGP_CBAJ_G0021246.1 mouse_genomes_project 14 70141163 70145643 - MGP_CBAJ_P0039665 Polr3d protein_coding protein_coding MGP_CBAJ_T0003471.1 MGP_CBAJ_G0003159.1 mouse_genomes_project 14 51944698 52014914 - Gm42877 antisense antisense MGP_CBAJ_T0003472.1 MGP_CBAJ_G0003159.1 mouse_genomes_project 14 51990871 52014974 - Gm42877 antisense antisense MGP_CBAJ_T0009875.1 MGP_CBAJ_G0008013.1 mouse_genomes_project 14 63782350 63782435 + Mir124a-1 miRNA miRNA MGP_CBAJ_T0038562.1 MGP_CBAJ_G0020872.1 mouse_genomes_project 14 29669816 29761302 - MGP_CBAJ_P0038562 Fam35a protein_coding protein_coding MGP_CBAJ_T0039561.1 MGP_CBAJ_G0021207.1 mouse_genomes_project 14 66290661 66357888 - MGP_CBAJ_P0039561 Dpysl2 protein_coding protein_coding MGP_CBAJ_T0002605.1 MGP_CBAJ_G0002494.1 mouse_genomes_project 14 51798196 51798784 + MGP_CBAJ_P0002605 Trdv2-1 TR_V_gene TR_V_gene MGP_CBAJ_T0002606.1 MGP_CBAJ_G0002494.1 mouse_genomes_project 14 51798196 51798784 + MGP_CBAJ_P0002606 Trdv2-1 TR_V_gene TR_V_gene MGP_CBAJ_T0039277.1 MGP_CBAJ_G0021091.1 mouse_genomes_project 14 54206559 54209118 - MGP_CBAJ_P0039277 Mcpt4 protein_coding protein_coding MGP_CBAJ_T0006591.1 MGP_CBAJ_G0005445.1 mouse_genomes_project 14 43605045 43608500 - Gm10101 lincRNA lincRNA MGP_CBAJ_T0006592.1 MGP_CBAJ_G0005445.1 mouse_genomes_project 14 43605050 43608500 - Gm10101 lincRNA lincRNA MGP_CBAJ_T0006613.1 MGP_CBAJ_G0005461.1 mouse_genomes_project 14 61086883 61089321 - Gm26969 lincRNA lincRNA MGP_CBAJ_T0039917.1 MGP_CBAJ_G0021338.1 mouse_genomes_project 14 107290708 107298072 + MGP_CBAJ_P0039917 Cln5 protein_coding protein_coding MGP_CBAJ_T0039745.1 MGP_CBAJ_G0021272.1 mouse_genomes_project 14 74803744 74875845 + MGP_CBAJ_P0039745 Htr2a protein_coding protein_coding MGP_CBAJ_T0100126.1 MGP_CBAJ_G0038381.1 mouse_genomes_project 14 98100159 98100285 + Gm24680 snoRNA snoRNA MGP_CBAJ_T0037999.1 MGP_CBAJ_G0020723.1 mouse_genomes_project 14 11764998 11832387 - MGP_CBAJ_P0037999 Ube2e1 protein_coding protein_coding MGP_CBAJ_T0038000.1 MGP_CBAJ_G0020723.1 mouse_genomes_project 14 11767188 11831562 - Ube2e1 protein_coding retained_intron MGP_CBAJ_T0038001.1 MGP_CBAJ_G0020723.1 mouse_genomes_project 14 11767488 11827889 - Ube2e1 protein_coding processed_transcript MGP_CBAJ_T0038002.1 MGP_CBAJ_G0020723.1 mouse_genomes_project 14 11822676 11831625 - Ube2e1 protein_coding retained_intron MGP_CBAJ_T0017169.1 MGP_CBAJ_G0015024.1 mouse_genomes_project 14 121779856 121792574 - 4930505G20Rik processed_transcript processed_transcript MGP_CBAJ_T0006602.1 MGP_CBAJ_G0005451.1 mouse_genomes_project 14 49497461 49499938 - Gm16617 lincRNA lincRNA MGP_CBAJ_T0039622.1 MGP_CBAJ_G0021232.1 mouse_genomes_project 14 69282249 69297288 - MGP_CBAJ_P0039622 R3hcc1 protein_coding protein_coding MGP_CBAJ_T0039623.1 MGP_CBAJ_G0021232.1 mouse_genomes_project 14 69282250 69297197 - MGP_CBAJ_P0039623 R3hcc1 protein_coding protein_coding MGP_CBAJ_T0039624.1 MGP_CBAJ_G0021232.1 mouse_genomes_project 14 69283274 69284964 - R3hcc1 protein_coding retained_intron MGP_CBAJ_T0039625.1 MGP_CBAJ_G0021232.1 mouse_genomes_project 14 69288420 69295017 - R3hcc1 protein_coding retained_intron MGP_CBAJ_T0039626.1 MGP_CBAJ_G0021232.1 mouse_genomes_project 14 69295328 69297257 - R3hcc1 protein_coding processed_transcript MGP_CBAJ_T0039939.1 MGP_CBAJ_G0021344.1 mouse_genomes_project 14 108862561 108872801 - MGP_CBAJ_P0039939 Pou4f1 protein_coding protein_coding MGP_CBAJ_T0039940.1 MGP_CBAJ_G0021344.1 mouse_genomes_project 14 108864855 108866150 - Pou4f1 protein_coding processed_transcript MGP_CBAJ_T0038785.1 MGP_CBAJ_G0020943.1 mouse_genomes_project 14 47296360 47297332 - MGP_CBAJ_P0038785 Olfr729 protein_coding protein_coding MGP_CBAJ_T0039960.1 MGP_CBAJ_G0021354.1 mouse_genomes_project 14 117500778 117508789 + MGP_CBAJ_P0039960 Slitrk5 protein_coding protein_coding MGP_CBAJ_T0038547.1 MGP_CBAJ_G0020860.1 mouse_genomes_project 14 28981040 29036843 + MGP_CBAJ_P0038547 Ptpn20 protein_coding protein_coding MGP_CBAJ_T0017161.1 MGP_CBAJ_G0015021.1 mouse_genomes_project 14 104228350 104262559 + 4930517O19Rik processed_transcript processed_transcript MGP_CBAJ_T0017162.1 MGP_CBAJ_G0015021.1 mouse_genomes_project 14 104228397 104262069 + 4930517O19Rik processed_transcript processed_transcript MGP_CBAJ_T0017163.1 MGP_CBAJ_G0015021.1 mouse_genomes_project 14 104228397 104263494 + 4930517O19Rik processed_transcript processed_transcript MGP_CBAJ_T0039021.1 MGP_CBAJ_G0021019.1 mouse_genomes_project 14 52337707 52347193 + MGP_CBAJ_P0039021 Mmp14 protein_coding protein_coding MGP_CBAJ_T0039022.1 MGP_CBAJ_G0021019.1 mouse_genomes_project 14 52337718 52342312 + MGP_CBAJ_P0039022 Mmp14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039023.1 MGP_CBAJ_G0021019.1 mouse_genomes_project 14 52337759 52342284 + Mmp14 protein_coding retained_intron MGP_CBAJ_T0039024.1 MGP_CBAJ_G0021019.1 mouse_genomes_project 14 52337813 52339361 + Mmp14 protein_coding retained_intron MGP_CBAJ_T0039025.1 MGP_CBAJ_G0021019.1 mouse_genomes_project 14 52337961 52348381 + MGP_CBAJ_P0039025 Mmp14 protein_coding unknown_likely_coding MGP_CBAJ_T0039026.1 MGP_CBAJ_G0021019.1 mouse_genomes_project 14 52338531 52341995 + MGP_CBAJ_P0039026 Mmp14 protein_coding protein_coding MGP_CBAJ_T0006555.1 MGP_CBAJ_G0005421.1 mouse_genomes_project 14 1081628 1088533 + 4930455B14Rik lincRNA lincRNA MGP_CBAJ_T0006556.1 MGP_CBAJ_G0005421.1 mouse_genomes_project 14 1081628 1088591 + 4930455B14Rik lincRNA lincRNA MGP_CBAJ_T0098862.1 MGP_CBAJ_G0037117.1 mouse_genomes_project 14 102418283 102418390 + Gm26139 snRNA snRNA MGP_CBAJ_T0002595.1 MGP_CBAJ_G0002487.1 mouse_genomes_project 14 51585015 51585632 + MGP_CBAJ_P0002595 Trav3-4 TR_V_gene TR_V_gene MGP_CBAJ_T0011253.1 MGP_CBAJ_G0009391.1 mouse_genomes_project 14 64471031 64471107 - Gm27263 misc_RNA misc_RNA MGP_CBAJ_T0009879.1 MGP_CBAJ_G0008017.1 mouse_genomes_project 14 67456432 67456542 - Mir6539 miRNA miRNA MGP_CBAJ_T0038979.1 MGP_CBAJ_G0021008.1 mouse_genomes_project 14 49944639 49945933 - MGP_CBAJ_P0038979 protein_coding protein_coding MGP_CBAJ_T0039663.1 MGP_CBAJ_G0021245.1 mouse_genomes_project 14 70068809 70131682 - MGP_CBAJ_P0039663 Piwil2 protein_coding protein_coding MGP_CBAJ_T0017150.1 MGP_CBAJ_G0015017.1 mouse_genomes_project 14 66977657 66988578 - Gm10860 processed_transcript processed_transcript MGP_CBAJ_T0038883.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49495792 49498542 + MGP_CBAJ_P0038883 Arhgef40 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038884.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49495906 49518158 + MGP_CBAJ_P0038884 Arhgef40 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038885.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49495911 49518754 + MGP_CBAJ_P0038885 Arhgef40 protein_coding protein_coding MGP_CBAJ_T0038886.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49495917 49501764 + Arhgef40 protein_coding retained_intron MGP_CBAJ_T0038887.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49495937 49518125 + MGP_CBAJ_P0038887 Arhgef40 protein_coding protein_coding MGP_CBAJ_T0038888.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49495959 49518136 + MGP_CBAJ_P0038888 Arhgef40 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038889.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49495982 49518130 + MGP_CBAJ_P0038889 Arhgef40 protein_coding protein_coding MGP_CBAJ_T0038890.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49495983 49518126 + MGP_CBAJ_P0038890 Arhgef40 protein_coding protein_coding MGP_CBAJ_T0038891.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49495985 49497145 + Arhgef40 protein_coding retained_intron MGP_CBAJ_T0038892.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49495988 49500225 + MGP_CBAJ_P0038892 Arhgef40 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038893.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49496004 49518126 + MGP_CBAJ_P0038893 Arhgef40 protein_coding protein_coding MGP_CBAJ_T0038894.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49496039 49502754 + Arhgef40 protein_coding retained_intron MGP_CBAJ_T0038895.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49496044 49499877 + MGP_CBAJ_P0038895 Arhgef40 protein_coding protein_coding MGP_CBAJ_T0038896.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49502865 49505106 + Arhgef40 protein_coding retained_intron MGP_CBAJ_T0038897.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49505102 49508062 + MGP_CBAJ_P0038897 Arhgef40 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038898.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49506280 49507250 + Arhgef40 protein_coding retained_intron MGP_CBAJ_T0038899.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49508652 49518132 + Arhgef40 protein_coding retained_intron MGP_CBAJ_T0038900.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49514838 49518126 + MGP_CBAJ_P0038900 Arhgef40 protein_coding protein_coding MGP_CBAJ_T0038901.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49514866 49516465 + Arhgef40 protein_coding retained_intron MGP_CBAJ_T0038902.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49514913 49518129 + MGP_CBAJ_P0038902 Arhgef40 protein_coding protein_coding MGP_CBAJ_T0038903.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49516072 49517523 + Arhgef40 protein_coding retained_intron MGP_CBAJ_T0038904.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49516583 49518044 + MGP_CBAJ_P0038904 Arhgef40 protein_coding protein_coding MGP_CBAJ_T0038905.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49516989 49517873 + Arhgef40 protein_coding retained_intron MGP_CBAJ_T0038906.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49517003 49517815 + Arhgef40 protein_coding retained_intron MGP_CBAJ_T0038907.1 MGP_CBAJ_G0020994.1 mouse_genomes_project 14 49517090 49517814 + Arhgef40 protein_coding retained_intron MGP_CBAJ_T0039668.1 MGP_CBAJ_G0021248.1 mouse_genomes_project 14 70178884 70227192 - MGP_CBAJ_P0039668 Bmp1 protein_coding protein_coding MGP_CBAJ_T0039669.1 MGP_CBAJ_G0021248.1 mouse_genomes_project 14 70193536 70226969 - MGP_CBAJ_P0039669 Bmp1 protein_coding unknown_likely_coding MGP_CBAJ_T0039349.1 MGP_CBAJ_G0021126.1 mouse_genomes_project 14 56488254 56533214 + MGP_CBAJ_P0039349 Fgf9 protein_coding protein_coding MGP_CBAJ_T0039350.1 MGP_CBAJ_G0021126.1 mouse_genomes_project 14 56490378 56531066 + MGP_CBAJ_P0039350 Fgf9 protein_coding protein_coding MGP_CBAJ_T0039351.1 MGP_CBAJ_G0021126.1 mouse_genomes_project 14 56492807 56531066 + MGP_CBAJ_P0039351 Fgf9 protein_coding protein_coding MGP_CBAJ_T0039352.1 MGP_CBAJ_G0021126.1 mouse_genomes_project 14 56494198 56530284 + MGP_CBAJ_P0039352 Fgf9 protein_coding protein_coding MGP_CBAJ_T0012875.1 MGP_CBAJ_G0010987.1 mouse_genomes_project 14 104234696 104235001 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006638.1 MGP_CBAJ_G0005479.1 mouse_genomes_project 14 125066143 125098279 + 1700044C05Rik lincRNA lincRNA MGP_CBAJ_T0002486.1 MGP_CBAJ_G0002391.1 mouse_genomes_project 14 52065060 52065122 + MGP_CBAJ_P0002486 Traj38 TR_J_gene TR_J_gene MGP_CBAJ_T0003468.1 MGP_CBAJ_G0003156.1 mouse_genomes_project 14 43120515 43123719 + antisense antisense MGP_CBAJ_T0012828.1 MGP_CBAJ_G0010940.1 mouse_genomes_project 14 36763825 36764828 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0002649.1 MGP_CBAJ_G0002529.1 mouse_genomes_project 14 50224819 50225318 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0038635.1 MGP_CBAJ_G0020902.1 mouse_genomes_project 14 41544144 41574365 + MGP_CBAJ_P0038635 Ptger2 protein_coding protein_coding MGP_CBAJ_T0039274.1 MGP_CBAJ_G0021088.1 mouse_genomes_project 14 54067955 54071466 - MGP_CBAJ_P0039274 Cma1 protein_coding protein_coding MGP_CBAJ_T0039932.1 MGP_CBAJ_G0021341.1 mouse_genomes_project 14 107793580 107898200 + MGP_CBAJ_P0039932 Scel protein_coding protein_coding MGP_CBAJ_T0039027.1 MGP_CBAJ_G0021020.1 mouse_genomes_project 14 52376508 52387155 + MGP_CBAJ_P0039027 Lrp10 protein_coding protein_coding MGP_CBAJ_T0038581.1 MGP_CBAJ_G0020879.1 mouse_genomes_project 14 30070821 30080343 - MGP_CBAJ_P0038581 Opn4 protein_coding protein_coding MGP_CBAJ_T0038582.1 MGP_CBAJ_G0020879.1 mouse_genomes_project 14 30072546 30080343 - MGP_CBAJ_P0038582 Opn4 protein_coding protein_coding MGP_CBAJ_T0039972.1 MGP_CBAJ_G0021360.1 mouse_genomes_project 14 124923185 124926984 - MGP_CBAJ_P0039972 Sox21 protein_coding protein_coding MGP_CBAJ_T0098865.1 MGP_CBAJ_G0037120.1 mouse_genomes_project 14 103717683 103717869 - Gm22970 snRNA snRNA MGP_CBAJ_T0006618.1 MGP_CBAJ_G0005465.1 mouse_genomes_project 14 63779033 63779817 + Mir124a-1hg lincRNA lincRNA MGP_CBAJ_T0006619.1 MGP_CBAJ_G0005465.1 mouse_genomes_project 14 63779755 63785669 + Mir124a-1hg lincRNA lincRNA MGP_CBAJ_T0006620.1 MGP_CBAJ_G0005465.1 mouse_genomes_project 14 63780240 63782170 + Mir124a-1hg lincRNA lincRNA MGP_CBAJ_T0006621.1 MGP_CBAJ_G0005465.1 mouse_genomes_project 14 63781388 63782385 + Mir124a-1hg lincRNA lincRNA MGP_CBAJ_T0038636.1 MGP_CBAJ_G0020903.1 mouse_genomes_project 14 41704851 41805974 - MGP_CBAJ_P0038636 Txndc16 protein_coding protein_coding MGP_CBAJ_T0038637.1 MGP_CBAJ_G0020903.1 mouse_genomes_project 14 41705302 41806005 - MGP_CBAJ_P0038637 Txndc16 protein_coding protein_coding MGP_CBAJ_T0038638.1 MGP_CBAJ_G0020903.1 mouse_genomes_project 14 41705310 41806908 - MGP_CBAJ_P0038638 Txndc16 protein_coding protein_coding MGP_CBAJ_T0038639.1 MGP_CBAJ_G0020903.1 mouse_genomes_project 14 41735755 41740260 - Txndc16 protein_coding retained_intron MGP_CBAJ_T0038640.1 MGP_CBAJ_G0020903.1 mouse_genomes_project 14 41738289 41805970 - Txndc16 protein_coding retained_intron MGP_CBAJ_T0038641.1 MGP_CBAJ_G0020903.1 mouse_genomes_project 14 41739158 41805962 - Txndc16 protein_coding retained_intron MGP_CBAJ_T0038642.1 MGP_CBAJ_G0020903.1 mouse_genomes_project 14 41790764 41805977 - MGP_CBAJ_P0038642 Txndc16 protein_coding protein_coding MGP_CBAJ_T0038643.1 MGP_CBAJ_G0020903.1 mouse_genomes_project 14 41792043 41805982 - Txndc16 protein_coding retained_intron MGP_CBAJ_T0038644.1 MGP_CBAJ_G0020903.1 mouse_genomes_project 14 41799873 41805944 - Txndc16 protein_coding processed_transcript MGP_CBAJ_T0038645.1 MGP_CBAJ_G0020903.1 mouse_genomes_project 14 41804467 41805970 - Txndc16 protein_coding processed_transcript MGP_CBAJ_T0039132.1 MGP_CBAJ_G0021051.1 mouse_genomes_project 14 53151340 53161446 - MGP_CBAJ_P0039132 Jph4 protein_coding protein_coding MGP_CBAJ_T0039133.1 MGP_CBAJ_G0021051.1 mouse_genomes_project 14 53151787 53160063 - MGP_CBAJ_P0039133 Jph4 protein_coding protein_coding MGP_CBAJ_T0039134.1 MGP_CBAJ_G0021051.1 mouse_genomes_project 14 53154152 53155069 - Jph4 protein_coding retained_intron MGP_CBAJ_T0039135.1 MGP_CBAJ_G0021051.1 mouse_genomes_project 14 53156000 53161091 - Jph4 protein_coding retained_intron MGP_CBAJ_T0098843.1 MGP_CBAJ_G0037098.1 mouse_genomes_project 14 48186605 48186709 + Gm24689 snRNA snRNA MGP_CBAJ_T0003513.1 MGP_CBAJ_G0003188.1 mouse_genomes_project 14 129486274 129489998 - 1700108J01Rik antisense antisense MGP_CBAJ_T0038806.1 MGP_CBAJ_G0020961.1 mouse_genomes_project 14 47947987 47948857 + MGP_CBAJ_P0038806 Olfr748 protein_coding protein_coding MGP_CBAJ_T0039507.1 MGP_CBAJ_G0021189.1 mouse_genomes_project 14 64673272 64697981 - MGP_CBAJ_P0039507 Pnoc protein_coding protein_coding MGP_CBAJ_T0038558.1 MGP_CBAJ_G0020870.1 mouse_genomes_project 14 29621625 29628818 - MGP_CBAJ_P0038558 Gprin2 protein_coding protein_coding MGP_CBAJ_T0002578.1 MGP_CBAJ_G0002471.1 mouse_genomes_project 14 50735281 51570852 + MGP_CBAJ_P0002578 TR_V_gene TR_V_gene MGP_CBAJ_T0012851.1 MGP_CBAJ_G0010963.1 mouse_genomes_project 14 55001778 55001949 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0039683.1 MGP_CBAJ_G0021256.1 mouse_genomes_project 14 70364021 70370082 - MGP_CBAJ_P0039683 Fgf17 protein_coding protein_coding MGP_CBAJ_T0039544.1 MGP_CBAJ_G0021203.1 mouse_genomes_project 14 65716513 65730906 + MGP_CBAJ_P0039544 Trim35 protein_coding protein_coding MGP_CBAJ_T0039545.1 MGP_CBAJ_G0021203.1 mouse_genomes_project 14 65716572 65727779 + MGP_CBAJ_P0039545 Trim35 protein_coding protein_coding MGP_CBAJ_T0038133.1 MGP_CBAJ_G0020760.1 mouse_genomes_project 14 16104664 16110313 - MGP_CBAJ_P0038133 Zfp503 protein_coding protein_coding MGP_CBAJ_T0038511.1 MGP_CBAJ_G0020850.1 mouse_genomes_project 14 27876449 27913708 + MGP_CBAJ_P0038511 Prrxl1 protein_coding unknown_likely_coding MGP_CBAJ_T0038512.1 MGP_CBAJ_G0020850.1 mouse_genomes_project 14 27876856 27938174 + MGP_CBAJ_P0038512 Prrxl1 protein_coding protein_coding MGP_CBAJ_T0038513.1 MGP_CBAJ_G0020850.1 mouse_genomes_project 14 27877316 27938216 + MGP_CBAJ_P0038513 Prrxl1 protein_coding protein_coding MGP_CBAJ_T0039442.1 MGP_CBAJ_G0021161.1 mouse_genomes_project 14 62009634 62012588 + MGP_CBAJ_P0039442 Defb47 protein_coding protein_coding MGP_CBAJ_T0009855.1 MGP_CBAJ_G0007993.1 mouse_genomes_project 14 22088463 22088586 - Gm23633 miRNA miRNA MGP_CBAJ_T0002652.1 MGP_CBAJ_G0002532.1 mouse_genomes_project 14 50884034 50884303 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0038103.1 MGP_CBAJ_G0020755.1 mouse_genomes_project 14 15762888 15804511 - MGP_CBAJ_P0038103 Dupd1 protein_coding protein_coding MGP_CBAJ_T0100098.1 MGP_CBAJ_G0038353.1 mouse_genomes_project 14 32341557 32341680 + Gm24394 snoRNA snoRNA MGP_CBAJ_T0003450.1 MGP_CBAJ_G0003141.1 mouse_genomes_project 14 15838982 15843792 + Gm15935 antisense antisense MGP_CBAJ_T0003451.1 MGP_CBAJ_G0003141.1 mouse_genomes_project 14 15839004 15844087 + Gm15935 antisense antisense MGP_CBAJ_T0003452.1 MGP_CBAJ_G0003141.1 mouse_genomes_project 14 15839028 15843538 + Gm15935 antisense antisense MGP_CBAJ_T0038794.1 MGP_CBAJ_G0020950.1 mouse_genomes_project 14 47538394 47545500 + MGP_CBAJ_P0038794 Tlr11 protein_coding protein_coding MGP_CBAJ_T0038795.1 MGP_CBAJ_G0020950.1 mouse_genomes_project 14 47542338 47545331 + MGP_CBAJ_P0038795 Tlr11 protein_coding protein_coding MGP_CBAJ_T0039380.1 MGP_CBAJ_G0021135.1 mouse_genomes_project 14 58150527 58189870 - MGP_CBAJ_P0039380 Cdadc1 protein_coding protein_coding MGP_CBAJ_T0039381.1 MGP_CBAJ_G0021135.1 mouse_genomes_project 14 58150527 58189870 - MGP_CBAJ_P0039381 Cdadc1 protein_coding protein_coding MGP_CBAJ_T0039382.1 MGP_CBAJ_G0021135.1 mouse_genomes_project 14 58154125 58189870 - MGP_CBAJ_P0039382 Cdadc1 protein_coding protein_coding MGP_CBAJ_T0039383.1 MGP_CBAJ_G0021135.1 mouse_genomes_project 14 58157363 58189870 - MGP_CBAJ_P0039383 Cdadc1 protein_coding protein_coding MGP_CBAJ_T0039500.1 MGP_CBAJ_G0021184.1 mouse_genomes_project 14 64176921 64278858 + MGP_CBAJ_P0039500 Ints9 protein_coding protein_coding MGP_CBAJ_T0100084.1 MGP_CBAJ_G0038339.1 mouse_genomes_project 14 3049404 3049604 + Gm22053 snoRNA snoRNA MGP_CBAJ_T0097953.1 MGP_CBAJ_G0036226.1 mouse_genomes_project 14 78094768 78094878 + n-R5s48 rRNA rRNA MGP_CBAJ_T0101633.1 MGP_CBAJ_G0039664.1 mouse_genomes_project 14 13504172 13506387 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0039959.1 MGP_CBAJ_G0021353.1 mouse_genomes_project 14 116106226 116112755 - MGP_CBAJ_P0039959 Slitrk6 protein_coding protein_coding MGP_CBAJ_T0039257.1 MGP_CBAJ_G0021077.1 mouse_genomes_project 14 53848984 53858792 + MGP_CBAJ_P0039257 Nop9 protein_coding protein_coding MGP_CBAJ_T0002513.1 MGP_CBAJ_G0002418.1 mouse_genomes_project 14 52098917 52098976 + MGP_CBAJ_P0002513 Traj7 TR_J_gene TR_J_gene MGP_CBAJ_T0038986.1 MGP_CBAJ_G0021011.1 mouse_genomes_project 14 50049241 50053971 - MGP_CBAJ_P0038986 Olfr1508 protein_coding protein_coding MGP_CBAJ_T0038987.1 MGP_CBAJ_G0021011.1 mouse_genomes_project 14 50049595 50054005 - MGP_CBAJ_P0038987 Olfr1508 protein_coding protein_coding MGP_CBAJ_T0038988.1 MGP_CBAJ_G0021011.1 mouse_genomes_project 14 50050063 50053600 - MGP_CBAJ_P0038988 Olfr1508 protein_coding protein_coding MGP_CBAJ_T0006581.1 MGP_CBAJ_G0005436.1 mouse_genomes_project 14 27740377 27758917 + Gm2990 lincRNA lincRNA MGP_CBAJ_T0101045.1 MGP_CBAJ_G0039271.1 mouse_genomes_project 14 57357502 57357985 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101046.1 MGP_CBAJ_G0039271.1 mouse_genomes_project 14 57357906 57358898 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0002477.1 MGP_CBAJ_G0002382.1 mouse_genomes_project 14 52056348 52056405 + MGP_CBAJ_P0002477 Traj47 TR_J_gene TR_J_gene MGP_CBAJ_T0100095.1 MGP_CBAJ_G0038350.1 mouse_genomes_project 14 27427317 27427514 - Gm23946 snoRNA snoRNA MGP_CBAJ_T0002517.1 MGP_CBAJ_G0002422.1 mouse_genomes_project 14 52105241 52105307 + MGP_CBAJ_P0002517 Traj3 TR_J_gene TR_J_gene MGP_CBAJ_T0003458.1 MGP_CBAJ_G0003146.1 mouse_genomes_project 14 21240462 21251926 - Arf4os antisense antisense MGP_CBAJ_T0038653.1 MGP_CBAJ_G0020909.1 mouse_genomes_project 14 42100466 42176228 - MGP_CBAJ_P0038653 Fermt2 protein_coding protein_coding MGP_CBAJ_T0038654.1 MGP_CBAJ_G0020909.1 mouse_genomes_project 14 42110999 42119739 - MGP_CBAJ_P0038654 Fermt2 protein_coding protein_coding MGP_CBAJ_T0038655.1 MGP_CBAJ_G0020909.1 mouse_genomes_project 14 42117776 42175928 - MGP_CBAJ_P0038655 Fermt2 protein_coding protein_coding MGP_CBAJ_T0038656.1 MGP_CBAJ_G0020909.1 mouse_genomes_project 14 42149515 42175750 - Fermt2 protein_coding processed_transcript MGP_CBAJ_T0039647.1 MGP_CBAJ_G0021242.1 mouse_genomes_project 14 69839588 69869156 - MGP_CBAJ_P0039647 Sorbs3 protein_coding protein_coding MGP_CBAJ_T0039648.1 MGP_CBAJ_G0021242.1 mouse_genomes_project 14 69840290 69867390 - MGP_CBAJ_P0039648 Sorbs3 protein_coding unknown_likely_coding MGP_CBAJ_T0038843.1 MGP_CBAJ_G0020977.1 mouse_genomes_project 14 48364051 48374885 + MGP_CBAJ_P0038843 protein_coding protein_coding MGP_CBAJ_T0038845.1 MGP_CBAJ_G0020977.1 mouse_genomes_project 14 48368709 48374885 + MGP_CBAJ_P0038845 protein_coding protein_coding MGP_CBAJ_T0003494.1 MGP_CBAJ_G0003176.1 mouse_genomes_project 14 66845586 66855394 - Gm6878 antisense antisense MGP_CBAJ_T0039490.1 MGP_CBAJ_G0021183.1 mouse_genomes_project 14 64034601 64176727 - MGP_CBAJ_P0039490 Hmbox1 protein_coding protein_coding MGP_CBAJ_T0039491.1 MGP_CBAJ_G0021183.1 mouse_genomes_project 14 64037628 64048307 - Hmbox1 protein_coding processed_transcript MGP_CBAJ_T0039492.1 MGP_CBAJ_G0021183.1 mouse_genomes_project 14 64048228 64176724 - MGP_CBAJ_P0039492 Hmbox1 protein_coding protein_coding MGP_CBAJ_T0039493.1 MGP_CBAJ_G0021183.1 mouse_genomes_project 14 64048228 64176748 - MGP_CBAJ_P0039493 Hmbox1 protein_coding protein_coding MGP_CBAJ_T0039494.1 MGP_CBAJ_G0021183.1 mouse_genomes_project 14 64048824 64176509 - MGP_CBAJ_P0039494 Hmbox1 protein_coding protein_coding MGP_CBAJ_T0039495.1 MGP_CBAJ_G0021183.1 mouse_genomes_project 14 64049179 64129084 - MGP_CBAJ_P0039495 Hmbox1 protein_coding protein_coding MGP_CBAJ_T0039496.1 MGP_CBAJ_G0021183.1 mouse_genomes_project 14 64051069 64176733 - MGP_CBAJ_P0039496 Hmbox1 protein_coding protein_coding MGP_CBAJ_T0039497.1 MGP_CBAJ_G0021183.1 mouse_genomes_project 14 64051316 64176724 - MGP_CBAJ_P0039497 Hmbox1 protein_coding protein_coding MGP_CBAJ_T0039498.1 MGP_CBAJ_G0021183.1 mouse_genomes_project 14 64051349 64176724 - MGP_CBAJ_P0039498 Hmbox1 protein_coding protein_coding MGP_CBAJ_T0039499.1 MGP_CBAJ_G0021183.1 mouse_genomes_project 14 64109589 64176724 - Hmbox1 protein_coding retained_intron MGP_CBAJ_T0012882.1 MGP_CBAJ_G0010994.1 mouse_genomes_project 14 129791101 129791740 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002478.1 MGP_CBAJ_G0002383.1 mouse_genomes_project 14 52056877 52056940 + MGP_CBAJ_P0002478 Traj46 TR_J_gene TR_J_gene MGP_CBAJ_T0098842.1 MGP_CBAJ_G0037097.1 mouse_genomes_project 14 47968494 47968601 + Gm24316 snRNA snRNA MGP_CBAJ_T0039478.1 MGP_CBAJ_G0021176.1 mouse_genomes_project 14 63111336 63127962 - MGP_CBAJ_P0039478 4930578I06Rik protein_coding protein_coding MGP_CBAJ_T0002556.1 MGP_CBAJ_G0002454.1 mouse_genomes_project 14 50198632 50199181 + MGP_CBAJ_P0002556 Trav3-1 TR_V_gene TR_V_gene MGP_CBAJ_T0012846.1 MGP_CBAJ_G0010958.1 mouse_genomes_project 14 52215124 52215450 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0038515.1 MGP_CBAJ_G0020852.1 mouse_genomes_project 14 28097228 28134094 + MGP_CBAJ_P0038515 1810011H11Rik protein_coding protein_coding MGP_CBAJ_T0039996.1 MGP_CBAJ_G0021367.1 mouse_genomes_project 14 125940490 126786964 + MGP_CBAJ_P0039996 Hs6st3 protein_coding protein_coding MGP_CBAJ_T0038210.1 MGP_CBAJ_G0020779.1 mouse_genomes_project 14 20458857 20464623 + protein_coding processed_transcript MGP_CBAJ_T0038215.1 MGP_CBAJ_G0020779.1 mouse_genomes_project 14 20460653 20468645 + protein_coding processed_transcript MGP_CBAJ_T0038217.1 MGP_CBAJ_G0020779.1 mouse_genomes_project 14 20464120 20471275 + MGP_CBAJ_P0038217 protein_coding protein_coding MGP_CBAJ_T0038213.1 MGP_CBAJ_G0020781.1 mouse_genomes_project 14 20460004 20467909 + MGP_CBAJ_P0038213 Duxbl2 protein_coding protein_coding MGP_CBAJ_T0038218.1 MGP_CBAJ_G0020781.1 mouse_genomes_project 14 20464120 20471299 + MGP_CBAJ_P0038218 Duxbl2 protein_coding protein_coding MGP_CBAJ_T0038245.1 MGP_CBAJ_G0020786.1 mouse_genomes_project 14 21279849 21289764 - MGP_CBAJ_P0038245 Pde12 protein_coding protein_coding MGP_CBAJ_T0038782.1 MGP_CBAJ_G0020940.1 mouse_genomes_project 14 47215748 47216772 - MGP_CBAJ_P0038782 protein_coding protein_coding MGP_CBAJ_T0012806.1 MGP_CBAJ_G0010918.1 mouse_genomes_project 14 6226148 6226280 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101640.1 MGP_CBAJ_G0039671.1 mouse_genomes_project 14 48374281 48374714 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0039879.1 MGP_CBAJ_G0021329.1 mouse_genomes_project 14 103835352 104155920 - MGP_CBAJ_P0039879 Klf12 protein_coding protein_coding MGP_CBAJ_T0039285.1 MGP_CBAJ_G0021099.1 mouse_genomes_project 14 54350867 54352661 - MGP_CBAJ_P0039285 Gzmf protein_coding protein_coding MGP_CBAJ_T0039546.1 MGP_CBAJ_G0021204.1 mouse_genomes_project 14 65763769 65776233 + MGP_CBAJ_P0039546 Stmn4 protein_coding protein_coding MGP_CBAJ_T0039547.1 MGP_CBAJ_G0021204.1 mouse_genomes_project 14 65763777 65781157 + MGP_CBAJ_P0039547 Stmn4 protein_coding protein_coding MGP_CBAJ_T0039548.1 MGP_CBAJ_G0021204.1 mouse_genomes_project 14 65763840 65775330 + Stmn4 protein_coding retained_intron MGP_CBAJ_T0039549.1 MGP_CBAJ_G0021204.1 mouse_genomes_project 14 65763840 65775119 + Stmn4 protein_coding processed_transcript MGP_CBAJ_T0039550.1 MGP_CBAJ_G0021204.1 mouse_genomes_project 14 65763846 65781151 + MGP_CBAJ_P0039550 Stmn4 protein_coding protein_coding MGP_CBAJ_T0039551.1 MGP_CBAJ_G0021204.1 mouse_genomes_project 14 65763847 65781151 + MGP_CBAJ_P0039551 Stmn4 protein_coding protein_coding MGP_CBAJ_T0039552.1 MGP_CBAJ_G0021204.1 mouse_genomes_project 14 65763848 65781125 + MGP_CBAJ_P0039552 Stmn4 protein_coding protein_coding MGP_CBAJ_T0039553.1 MGP_CBAJ_G0021204.1 mouse_genomes_project 14 65763851 65776238 + MGP_CBAJ_P0039553 Stmn4 protein_coding protein_coding MGP_CBAJ_T0039554.1 MGP_CBAJ_G0021204.1 mouse_genomes_project 14 65763854 65777579 + Stmn4 protein_coding retained_intron MGP_CBAJ_T0009889.1 MGP_CBAJ_G0008027.1 mouse_genomes_project 14 104744034 104744151 + Gm22401 miRNA miRNA MGP_CBAJ_T0100130.1 MGP_CBAJ_G0038385.1 mouse_genomes_project 14 101982596 101982677 - Gm26006 snoRNA snoRNA MGP_CBAJ_T0002509.1 MGP_CBAJ_G0002414.1 mouse_genomes_project 14 52093166 52093223 + MGP_CBAJ_P0002509 Traj13 TR_J_gene TR_J_gene MGP_CBAJ_T0039250.1 MGP_CBAJ_G0021075.1 mouse_genomes_project 14 53819282 53825608 - MGP_CBAJ_P0039250 Rabggta protein_coding protein_coding MGP_CBAJ_T0039251.1 MGP_CBAJ_G0021075.1 mouse_genomes_project 14 53819286 53825586 - MGP_CBAJ_P0039251 Rabggta protein_coding protein_coding MGP_CBAJ_T0039252.1 MGP_CBAJ_G0021075.1 mouse_genomes_project 14 53819734 53825667 - MGP_CBAJ_P0039252 Rabggta protein_coding protein_coding MGP_CBAJ_T0098845.1 MGP_CBAJ_G0037100.1 mouse_genomes_project 14 52517726 52517834 + Gm24705 snRNA snRNA MGP_CBAJ_T0038975.1 MGP_CBAJ_G0021005.1 mouse_genomes_project 14 49859535 49864690 - Sall2 protein_coding processed_transcript MGP_CBAJ_T0038976.1 MGP_CBAJ_G0021005.1 mouse_genomes_project 14 49859535 49881290 - MGP_CBAJ_P0038976 Sall2 protein_coding protein_coding MGP_CBAJ_T0039740.1 MGP_CBAJ_G0021271.1 mouse_genomes_project 14 73558227 73562427 + Sucla2 protein_coding processed_transcript MGP_CBAJ_T0039741.1 MGP_CBAJ_G0021271.1 mouse_genomes_project 14 73558403 73604338 + MGP_CBAJ_P0039741 Sucla2 protein_coding protein_coding MGP_CBAJ_T0039742.1 MGP_CBAJ_G0021271.1 mouse_genomes_project 14 73574101 73574690 + Sucla2 protein_coding retained_intron MGP_CBAJ_T0039743.1 MGP_CBAJ_G0021271.1 mouse_genomes_project 14 73598685 73599195 + Sucla2 protein_coding retained_intron MGP_CBAJ_T0039744.1 MGP_CBAJ_G0021271.1 mouse_genomes_project 14 73603592 73604329 + Sucla2 protein_coding processed_transcript MGP_CBAJ_T0039086.1 MGP_CBAJ_G0021038.1 mouse_genomes_project 14 52895718 52910382 + MGP_CBAJ_P0039086 Gm20521 protein_coding protein_coding MGP_CBAJ_T0002552.1 MGP_CBAJ_G0002452.1 mouse_genomes_project 14 50000188 50001161 + MGP_CBAJ_P0002552 Trav1 TR_V_gene TR_V_gene MGP_CBAJ_T0002553.1 MGP_CBAJ_G0002452.1 mouse_genomes_project 14 50000227 50001161 + MGP_CBAJ_P0002553 Trav1 TR_V_gene TR_V_gene MGP_CBAJ_T0038856.1 MGP_CBAJ_G0020987.1 mouse_genomes_project 14 49200525 49211960 - MGP_CBAJ_P0038856 Ang4 protein_coding protein_coding MGP_CBAJ_T0100123.1 MGP_CBAJ_G0038378.1 mouse_genomes_project 14 92731515 92731646 + Gm25495 snoRNA snoRNA MGP_CBAJ_T0002505.1 MGP_CBAJ_G0002410.1 mouse_genomes_project 14 52088191 52088257 + MGP_CBAJ_P0002505 Traj18 TR_J_gene TR_J_gene MGP_CBAJ_T0017170.1 MGP_CBAJ_G0015025.1 mouse_genomes_project 14 122217898 122309404 - Gm20713 processed_transcript processed_transcript MGP_CBAJ_T0100100.1 MGP_CBAJ_G0038355.1 mouse_genomes_project 14 33234491 33234622 - Gm23909 snoRNA snoRNA MGP_CBAJ_T0009865.1 MGP_CBAJ_G0008003.1 mouse_genomes_project 14 52966459 52966542 - Mir208a miRNA miRNA MGP_CBAJ_T0039782.1 MGP_CBAJ_G0021287.1 mouse_genomes_project 14 76311836 76322321 + MGP_CBAJ_P0039782 Kctd4 protein_coding protein_coding MGP_CBAJ_T0039136.1 MGP_CBAJ_G0021052.1 mouse_genomes_project 14 53277892 53297270 + MGP_CBAJ_P0039136 Dhrs2 protein_coding protein_coding MGP_CBAJ_T0039137.1 MGP_CBAJ_G0021052.1 mouse_genomes_project 14 53290580 53297083 + MGP_CBAJ_P0039137 Dhrs2 protein_coding protein_coding MGP_CBAJ_T0039305.1 MGP_CBAJ_G0021110.1 mouse_genomes_project 14 55280905 55291344 + MGP_CBAJ_P0039305 protein_coding protein_coding MGP_CBAJ_T0002514.1 MGP_CBAJ_G0002419.1 mouse_genomes_project 14 52100130 52100192 + MGP_CBAJ_P0002514 Traj6 TR_J_gene TR_J_gene MGP_CBAJ_T0039632.1 MGP_CBAJ_G0021238.1 mouse_genomes_project 14 69749293 69790710 + MGP_CBAJ_P0039632 Bin3 protein_coding protein_coding MGP_CBAJ_T0009852.1 MGP_CBAJ_G0007990.1 mouse_genomes_project 14 19970489 19970574 + Mir3075 miRNA miRNA MGP_CBAJ_T0039878.1 MGP_CBAJ_G0021328.1 mouse_genomes_project 14 103168709 103183461 + MGP_CBAJ_P0039878 Klf5 protein_coding protein_coding MGP_CBAJ_T0039756.1 MGP_CBAJ_G0021276.1 mouse_genomes_project 14 75296536 75344809 - MGP_CBAJ_P0039756 Lrrc63 protein_coding protein_coding MGP_CBAJ_T0002569.1 MGP_CBAJ_G0002463.1 mouse_genomes_project 14 50390415 50390901 + MGP_CBAJ_P0002569 TR_V_gene TR_V_gene MGP_CBAJ_T0002483.1 MGP_CBAJ_G0002388.1 mouse_genomes_project 14 52060761 52060816 + MGP_CBAJ_P0002483 Traj41 TR_J_gene TR_J_gene MGP_CBAJ_T0012876.1 MGP_CBAJ_G0010988.1 mouse_genomes_project 14 109764405 109764962 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0038835.1 MGP_CBAJ_G0020971.1 mouse_genomes_project 14 48217289 48226617 + MGP_CBAJ_P0038835 Pnp protein_coding protein_coding MGP_CBAJ_T0038836.1 MGP_CBAJ_G0020971.1 mouse_genomes_project 14 48217494 48225054 + MGP_CBAJ_P0038836 Pnp protein_coding protein_coding MGP_CBAJ_T0101646.1 MGP_CBAJ_G0039677.1 mouse_genomes_project 14 49334802 49335264 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0009876.1 MGP_CBAJ_G0008014.1 mouse_genomes_project 14 63782878 63782965 + Mir3078 miRNA miRNA MGP_CBAJ_T0038959.1 MGP_CBAJ_G0021004.1 mouse_genomes_project 14 49839656 49853252 - MGP_CBAJ_P0038959 Mettl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038960.1 MGP_CBAJ_G0021004.1 mouse_genomes_project 14 49839829 49853297 - MGP_CBAJ_P0038960 Mettl3 protein_coding protein_coding MGP_CBAJ_T0038961.1 MGP_CBAJ_G0021004.1 mouse_genomes_project 14 49839837 49845325 - MGP_CBAJ_P0038961 Mettl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038962.1 MGP_CBAJ_G0021004.1 mouse_genomes_project 14 49839845 49841650 - Mettl3 protein_coding retained_intron MGP_CBAJ_T0038963.1 MGP_CBAJ_G0021004.1 mouse_genomes_project 14 49839845 49841733 - MGP_CBAJ_P0038963 Mettl3 protein_coding protein_coding MGP_CBAJ_T0038964.1 MGP_CBAJ_G0021004.1 mouse_genomes_project 14 49839845 49841732 - MGP_CBAJ_P0038964 Mettl3 protein_coding protein_coding MGP_CBAJ_T0038965.1 MGP_CBAJ_G0021004.1 mouse_genomes_project 14 49840491 49853293 - MGP_CBAJ_P0038965 Mettl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038966.1 MGP_CBAJ_G0021004.1 mouse_genomes_project 14 49840691 49841743 - Mettl3 protein_coding retained_intron MGP_CBAJ_T0038967.1 MGP_CBAJ_G0021004.1 mouse_genomes_project 14 49841641 49843438 - Mettl3 protein_coding retained_intron MGP_CBAJ_T0038968.1 MGP_CBAJ_G0021004.1 mouse_genomes_project 14 49841971 49844753 - Mettl3 protein_coding retained_intron MGP_CBAJ_T0038969.1 MGP_CBAJ_G0021004.1 mouse_genomes_project 14 49842186 49853255 - MGP_CBAJ_P0038969 Mettl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038970.1 MGP_CBAJ_G0021004.1 mouse_genomes_project 14 49842451 49853156 - MGP_CBAJ_P0038970 Mettl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038971.1 MGP_CBAJ_G0021004.1 mouse_genomes_project 14 49843006 49853156 - MGP_CBAJ_P0038971 Mettl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038972.1 MGP_CBAJ_G0021004.1 mouse_genomes_project 14 49843016 49853276 - MGP_CBAJ_P0038972 Mettl3 protein_coding protein_coding MGP_CBAJ_T0038973.1 MGP_CBAJ_G0021004.1 mouse_genomes_project 14 49845332 49853268 - MGP_CBAJ_P0038973 Mettl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038974.1 MGP_CBAJ_G0021004.1 mouse_genomes_project 14 49848636 49853293 - Mettl3 protein_coding retained_intron MGP_CBAJ_T0009891.1 MGP_CBAJ_G0008029.1 mouse_genomes_project 14 107946551 107946656 - Gm22877 miRNA miRNA MGP_CBAJ_T0003505.1 MGP_CBAJ_G0003183.1 mouse_genomes_project 14 75418515 75420714 - Gm15629 antisense antisense MGP_CBAJ_T0017149.1 MGP_CBAJ_G0015016.1 mouse_genomes_project 14 66872680 66945458 - 4930438E09Rik processed_transcript processed_transcript MGP_CBAJ_T0100124.1 MGP_CBAJ_G0038379.1 mouse_genomes_project 14 93647530 93647644 - Gm23225 snoRNA snoRNA MGP_CBAJ_T0002510.1 MGP_CBAJ_G0002415.1 mouse_genomes_project 14 52093980 52094038 + MGP_CBAJ_P0002510 Traj12 TR_J_gene TR_J_gene MGP_CBAJ_T0038702.1 MGP_CBAJ_G0020922.1 mouse_genomes_project 14 44228214 44243671 + MGP_CBAJ_P0038702 protein_coding protein_coding MGP_CBAJ_T0038703.1 MGP_CBAJ_G0020922.1 mouse_genomes_project 14 44236510 44243570 + MGP_CBAJ_P0038703 protein_coding protein_coding MGP_CBAJ_T0038704.1 MGP_CBAJ_G0020922.1 mouse_genomes_project 14 44236597 44249031 + MGP_CBAJ_P0038704 protein_coding unknown_likely_coding MGP_CBAJ_T0039306.1 MGP_CBAJ_G0021111.1 mouse_genomes_project 14 55308035 55332700 - MGP_CBAJ_P0039306 Gja3 protein_coding protein_coding MGP_CBAJ_T0039847.1 MGP_CBAJ_G0021314.1 mouse_genomes_project 14 80689190 80694509 - MGP_CBAJ_P0039847 Gm10845 protein_coding protein_coding MGP_CBAJ_T0038333.1 MGP_CBAJ_G0020813.1 mouse_genomes_project 14 25976107 25996657 - MGP_CBAJ_P0038333 Itih3 protein_coding unknown_likely_coding MGP_CBAJ_T0038334.1 MGP_CBAJ_G0020813.1 mouse_genomes_project 14 25976110 25996868 - MGP_CBAJ_P0038334 Itih3 protein_coding protein_coding MGP_CBAJ_T0038335.1 MGP_CBAJ_G0020813.1 mouse_genomes_project 14 25976113 25996695 - Itih3 protein_coding retained_intron MGP_CBAJ_T0038336.1 MGP_CBAJ_G0020813.1 mouse_genomes_project 14 25976220 25996657 - MGP_CBAJ_P0038336 Itih3 protein_coding protein_coding MGP_CBAJ_T0038337.1 MGP_CBAJ_G0020813.1 mouse_genomes_project 14 25977375 25982871 - MGP_CBAJ_P0038337 Itih3 protein_coding protein_coding MGP_CBAJ_T0038338.1 MGP_CBAJ_G0020813.1 mouse_genomes_project 14 25979445 25981613 - Itih3 protein_coding retained_intron MGP_CBAJ_T0038742.1 MGP_CBAJ_G0020928.1 mouse_genomes_project 14 45466790 45536660 + MGP_CBAJ_P0038742 Tmem260 protein_coding protein_coding MGP_CBAJ_T0038743.1 MGP_CBAJ_G0020928.1 mouse_genomes_project 14 45467014 45521528 + Tmem260 protein_coding retained_intron MGP_CBAJ_T0038744.1 MGP_CBAJ_G0020928.1 mouse_genomes_project 14 45467044 45539003 + MGP_CBAJ_P0038744 Tmem260 protein_coding protein_coding MGP_CBAJ_T0038745.1 MGP_CBAJ_G0020928.1 mouse_genomes_project 14 45467055 45536005 + MGP_CBAJ_P0038745 Tmem260 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038746.1 MGP_CBAJ_G0020928.1 mouse_genomes_project 14 45467060 45532248 + Tmem260 protein_coding retained_intron MGP_CBAJ_T0038140.1 MGP_CBAJ_G0020762.1 mouse_genomes_project 14 17557302 18111221 - MGP_CBAJ_P0038140 Kcnma1 protein_coding protein_coding MGP_CBAJ_T0038141.1 MGP_CBAJ_G0020762.1 mouse_genomes_project 14 17557302 18111221 - MGP_CBAJ_P0038141 Kcnma1 protein_coding protein_coding MGP_CBAJ_T0038142.1 MGP_CBAJ_G0020762.1 mouse_genomes_project 14 17566565 18111221 - MGP_CBAJ_P0038142 Kcnma1 protein_coding protein_coding MGP_CBAJ_T0038143.1 MGP_CBAJ_G0020762.1 mouse_genomes_project 14 17566565 18111221 - MGP_CBAJ_P0038143 Kcnma1 protein_coding protein_coding MGP_CBAJ_T0038144.1 MGP_CBAJ_G0020762.1 mouse_genomes_project 14 17566565 18111221 - MGP_CBAJ_P0038144 Kcnma1 protein_coding protein_coding MGP_CBAJ_T0038145.1 MGP_CBAJ_G0020762.1 mouse_genomes_project 14 17567252 18329848 - MGP_CBAJ_P0038145 Kcnma1 protein_coding protein_coding MGP_CBAJ_T0038146.1 MGP_CBAJ_G0020762.1 mouse_genomes_project 14 17567266 17945367 - MGP_CBAJ_P0038146 Kcnma1 protein_coding protein_coding MGP_CBAJ_T0038147.1 MGP_CBAJ_G0020762.1 mouse_genomes_project 14 17567266 18330502 - MGP_CBAJ_P0038147 Kcnma1 protein_coding protein_coding MGP_CBAJ_T0038148.1 MGP_CBAJ_G0020762.1 mouse_genomes_project 14 17567266 18111221 - MGP_CBAJ_P0038148 Kcnma1 protein_coding protein_coding MGP_CBAJ_T0038149.1 MGP_CBAJ_G0020762.1 mouse_genomes_project 14 17567762 18329848 - MGP_CBAJ_P0038149 Kcnma1 protein_coding protein_coding MGP_CBAJ_T0038150.1 MGP_CBAJ_G0020762.1 mouse_genomes_project 14 17567762 18329620 - MGP_CBAJ_P0038150 Kcnma1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038151.1 MGP_CBAJ_G0020762.1 mouse_genomes_project 14 17567892 18329768 - MGP_CBAJ_P0038151 Kcnma1 protein_coding protein_coding MGP_CBAJ_T0038152.1 MGP_CBAJ_G0020762.1 mouse_genomes_project 14 17578261 18111221 - MGP_CBAJ_P0038152 Kcnma1 protein_coding protein_coding MGP_CBAJ_T0038153.1 MGP_CBAJ_G0020762.1 mouse_genomes_project 14 17578261 18111221 - MGP_CBAJ_P0038153 Kcnma1 protein_coding protein_coding MGP_CBAJ_T0038154.1 MGP_CBAJ_G0020762.1 mouse_genomes_project 14 18328298 18329941 - MGP_CBAJ_P0038154 Kcnma1 protein_coding protein_coding MGP_CBAJ_T0012813.1 MGP_CBAJ_G0010925.1 mouse_genomes_project 14 12697857 12700190 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017177.1 MGP_CBAJ_G0015029.1 mouse_genomes_project 14 129753081 129756374 - processed_transcript retained_intron MGP_CBAJ_T0017178.1 MGP_CBAJ_G0015029.1 mouse_genomes_project 14 129753174 129761517 - processed_transcript processed_transcript MGP_CBAJ_T0012843.1 MGP_CBAJ_G0010955.1 mouse_genomes_project 14 50646524 50646830 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0039574.1 MGP_CBAJ_G0021212.1 mouse_genomes_project 14 66762625 66979767 + MGP_CBAJ_P0039574 Ebf2 protein_coding protein_coding MGP_CBAJ_T0039575.1 MGP_CBAJ_G0021212.1 mouse_genomes_project 14 66762919 66980907 + MGP_CBAJ_P0039575 Ebf2 protein_coding protein_coding MGP_CBAJ_T0039576.1 MGP_CBAJ_G0021212.1 mouse_genomes_project 14 66762936 66765848 + Ebf2 protein_coding retained_intron MGP_CBAJ_T0039577.1 MGP_CBAJ_G0021212.1 mouse_genomes_project 14 66763977 66978677 + MGP_CBAJ_P0039577 Ebf2 protein_coding protein_coding MGP_CBAJ_T0002582.1 MGP_CBAJ_G0002475.1 mouse_genomes_project 14 50825008 51570852 + MGP_CBAJ_P0002582 TR_V_gene TR_V_gene MGP_CBAJ_T0100135.1 MGP_CBAJ_G0038390.1 mouse_genomes_project 14 109044414 109044531 - Gm25724 snoRNA snoRNA MGP_CBAJ_T0006569.1 MGP_CBAJ_G0005429.1 mouse_genomes_project 14 19293837 19297844 + Gm10398 lincRNA lincRNA MGP_CBAJ_T0039188.1 MGP_CBAJ_G0021063.1 mouse_genomes_project 14 53672165 53675724 - MGP_CBAJ_P0039188 Psme2 protein_coding protein_coding MGP_CBAJ_T0039189.1 MGP_CBAJ_G0021063.1 mouse_genomes_project 14 53672166 53675738 - MGP_CBAJ_P0039189 Psme2 protein_coding protein_coding MGP_CBAJ_T0039190.1 MGP_CBAJ_G0021063.1 mouse_genomes_project 14 53672171 53673241 - Psme2 protein_coding retained_intron MGP_CBAJ_T0039191.1 MGP_CBAJ_G0021063.1 mouse_genomes_project 14 53672171 53674148 - Psme2 protein_coding retained_intron MGP_CBAJ_T0039192.1 MGP_CBAJ_G0021063.1 mouse_genomes_project 14 53672690 53674786 - Psme2 protein_coding retained_intron MGP_CBAJ_T0039193.1 MGP_CBAJ_G0021063.1 mouse_genomes_project 14 53672708 53675750 - MGP_CBAJ_P0039193 Psme2 protein_coding protein_coding MGP_CBAJ_T0039194.1 MGP_CBAJ_G0021063.1 mouse_genomes_project 14 53672719 53675501 - Psme2 protein_coding retained_intron MGP_CBAJ_T0039195.1 MGP_CBAJ_G0021063.1 mouse_genomes_project 14 53673830 53675610 - Psme2 protein_coding retained_intron MGP_CBAJ_T0039196.1 MGP_CBAJ_G0021063.1 mouse_genomes_project 14 53673953 53675585 - Psme2 protein_coding retained_intron MGP_CBAJ_T0039197.1 MGP_CBAJ_G0021063.1 mouse_genomes_project 14 53674634 53675532 - Psme2 protein_coding retained_intron MGP_CBAJ_T0002587.1 MGP_CBAJ_G0002480.1 mouse_genomes_project 14 51038079 51038346 + MGP_CBAJ_P0002587 Trav13n-4 TR_V_gene TR_V_gene MGP_CBAJ_T0012860.1 MGP_CBAJ_G0010972.1 mouse_genomes_project 14 71652495 71653480 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017166.1 MGP_CBAJ_G0015023.1 mouse_genomes_project 14 109992960 109999780 + 4930449E01Rik processed_transcript lincRNA MGP_CBAJ_T0017167.1 MGP_CBAJ_G0015023.1 mouse_genomes_project 14 109995094 109995454 + 4930449E01Rik processed_transcript TEC MGP_CBAJ_T0017168.1 MGP_CBAJ_G0015023.1 mouse_genomes_project 14 109997734 109999787 + 4930449E01Rik processed_transcript lincRNA MGP_CBAJ_T0012865.1 MGP_CBAJ_G0010977.1 mouse_genomes_project 14 74906684 74920380 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003439.1 MGP_CBAJ_G0003136.1 mouse_genomes_project 14 4682639 4698554 - Gm3848 antisense antisense MGP_CBAJ_T0003440.1 MGP_CBAJ_G0003136.1 mouse_genomes_project 14 4697542 4698539 - Gm3848 antisense antisense MGP_CBAJ_T0006585.1 MGP_CBAJ_G0005439.1 mouse_genomes_project 14 35755219 35793172 + 1700109I08Rik lincRNA lincRNA MGP_CBAJ_T0017164.1 MGP_CBAJ_G0015022.1 mouse_genomes_project 14 109560443 109565730 - Gm17066 processed_transcript processed_transcript MGP_CBAJ_T0017165.1 MGP_CBAJ_G0015022.1 mouse_genomes_project 14 109560462 109565515 - Gm17066 processed_transcript processed_transcript MGP_CBAJ_T0012872.1 MGP_CBAJ_G0010984.1 mouse_genomes_project 14 103161343 103161776 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0038799.1 MGP_CBAJ_G0020954.1 mouse_genomes_project 14 47614336 47615266 + MGP_CBAJ_P0038799 protein_coding protein_coding MGP_CBAJ_T0012831.1 MGP_CBAJ_G0010943.1 mouse_genomes_project 14 42379282 42379475 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0039687.1 MGP_CBAJ_G0021259.1 mouse_genomes_project 14 70495647 70503136 + Dok2 protein_coding processed_transcript MGP_CBAJ_T0039688.1 MGP_CBAJ_G0021259.1 mouse_genomes_project 14 70495660 70501702 + Dok2 protein_coding processed_transcript MGP_CBAJ_T0039689.1 MGP_CBAJ_G0021259.1 mouse_genomes_project 14 70502835 70505576 + Dok2 protein_coding processed_transcript MGP_CBAJ_T0039690.1 MGP_CBAJ_G0021259.1 mouse_genomes_project 14 70503867 70508059 + MGP_CBAJ_P0039690 Dok2 protein_coding protein_coding MGP_CBAJ_T0039691.1 MGP_CBAJ_G0021259.1 mouse_genomes_project 14 70505442 70506433 + Dok2 protein_coding retained_intron MGP_CBAJ_T0039692.1 MGP_CBAJ_G0021259.1 mouse_genomes_project 14 70505741 70507116 + Dok2 protein_coding processed_transcript MGP_CBAJ_T0039693.1 MGP_CBAJ_G0021259.1 mouse_genomes_project 14 70505926 70507125 + Dok2 protein_coding processed_transcript MGP_CBAJ_T0039694.1 MGP_CBAJ_G0021259.1 mouse_genomes_project 14 70506273 70507159 + Dok2 protein_coding retained_intron MGP_CBAJ_T0039461.1 MGP_CBAJ_G0021169.1 mouse_genomes_project 14 62441762 62500105 - MGP_CBAJ_P0039461 Blk protein_coding protein_coding MGP_CBAJ_T0038980.1 MGP_CBAJ_G0021009.1 mouse_genomes_project 14 49945180 49978805 - MGP_CBAJ_P0038980 protein_coding protein_coding MGP_CBAJ_T0039148.1 MGP_CBAJ_G0021056.1 mouse_genomes_project 14 53597702 53602893 - MGP_CBAJ_P0039148 Nrl protein_coding protein_coding MGP_CBAJ_T0039149.1 MGP_CBAJ_G0021056.1 mouse_genomes_project 14 53598252 53603683 - MGP_CBAJ_P0039149 Nrl protein_coding protein_coding MGP_CBAJ_T0039150.1 MGP_CBAJ_G0021056.1 mouse_genomes_project 14 53598252 53603667 - MGP_CBAJ_P0039150 Nrl protein_coding protein_coding MGP_CBAJ_T0038616.1 MGP_CBAJ_G0020892.1 mouse_genomes_project 14 37043571 37127705 - MGP_CBAJ_P0038616 Sh2d4b protein_coding protein_coding MGP_CBAJ_T0039771.1 MGP_CBAJ_G0021280.1 mouse_genomes_project 14 75718440 75801151 + MGP_CBAJ_P0039771 Siah3 protein_coding protein_coding MGP_CBAJ_T0038048.1 MGP_CBAJ_G0020739.1 mouse_genomes_project 14 14439962 14453936 - MGP_CBAJ_P0038048 Mss51 protein_coding protein_coding MGP_CBAJ_T0098877.1 MGP_CBAJ_G0037132.1 mouse_genomes_project 14 129662510 129662617 - Gm25464 snRNA snRNA MGP_CBAJ_T0038851.1 MGP_CBAJ_G0020982.1 mouse_genomes_project 14 48413328 48415091 - MGP_CBAJ_P0038851 Rnase1 protein_coding protein_coding MGP_CBAJ_T0037992.1 MGP_CBAJ_G0020722.1 mouse_genomes_project 14 11749832 11766221 + MGP_CBAJ_P0037992 Nkiras1 protein_coding protein_coding MGP_CBAJ_T0037993.1 MGP_CBAJ_G0020722.1 mouse_genomes_project 14 11749882 11762329 + MGP_CBAJ_P0037993 Nkiras1 protein_coding protein_coding MGP_CBAJ_T0037994.1 MGP_CBAJ_G0020722.1 mouse_genomes_project 14 11749900 11759608 + Nkiras1 protein_coding retained_intron MGP_CBAJ_T0037995.1 MGP_CBAJ_G0020722.1 mouse_genomes_project 14 11749907 11760691 + Nkiras1 protein_coding processed_transcript MGP_CBAJ_T0037996.1 MGP_CBAJ_G0020722.1 mouse_genomes_project 14 11749923 11762724 + MGP_CBAJ_P0037996 Nkiras1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037997.1 MGP_CBAJ_G0020722.1 mouse_genomes_project 14 11749934 11759363 + Nkiras1 protein_coding retained_intron MGP_CBAJ_T0037998.1 MGP_CBAJ_G0020722.1 mouse_genomes_project 14 11749960 11760832 + Nkiras1 protein_coding processed_transcript MGP_CBAJ_T0100119.1 MGP_CBAJ_G0038374.1 mouse_genomes_project 14 79250008 79250130 + Gm26251 snoRNA snoRNA MGP_CBAJ_T0006616.1 MGP_CBAJ_G0005463.1 mouse_genomes_project 14 61704832 61779269 + 4931440J10Rik lincRNA lincRNA MGP_CBAJ_T0039602.1 MGP_CBAJ_G0021224.1 mouse_genomes_project 14 68966481 68970506 + MGP_CBAJ_P0039602 Nkx3-1 protein_coding protein_coding MGP_CBAJ_T0038680.1 MGP_CBAJ_G0020916.1 mouse_genomes_project 14 43608606 43630570 + MGP_CBAJ_P0038680 Cgrrf1 protein_coding protein_coding MGP_CBAJ_T0038681.1 MGP_CBAJ_G0020916.1 mouse_genomes_project 14 43608691 43616860 + Cgrrf1 protein_coding retained_intron MGP_CBAJ_T0038682.1 MGP_CBAJ_G0020916.1 mouse_genomes_project 14 43608701 43623124 + Cgrrf1 protein_coding retained_intron MGP_CBAJ_T0038683.1 MGP_CBAJ_G0020916.1 mouse_genomes_project 14 43608716 43624585 + Cgrrf1 protein_coding retained_intron MGP_CBAJ_T0039262.1 MGP_CBAJ_G0021081.1 mouse_genomes_project 14 53876408 53892830 - MGP_CBAJ_P0039262 Adcy4 protein_coding protein_coding MGP_CBAJ_T0039263.1 MGP_CBAJ_G0021081.1 mouse_genomes_project 14 53876443 53892807 - MGP_CBAJ_P0039263 Adcy4 protein_coding protein_coding MGP_CBAJ_T0039287.1 MGP_CBAJ_G0021101.1 mouse_genomes_project 14 54407421 54410826 - MGP_CBAJ_P0039287 Gzmb protein_coding protein_coding MGP_CBAJ_T0040045.1 MGP_CBAJ_G0021388.1 mouse_genomes_project 14 130250619 130324170 - MGP_CBAJ_P0040045 Tmtc4 protein_coding protein_coding MGP_CBAJ_T0040046.1 MGP_CBAJ_G0021388.1 mouse_genomes_project 14 130250626 130324104 - MGP_CBAJ_P0040046 Tmtc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040047.1 MGP_CBAJ_G0021388.1 mouse_genomes_project 14 130251379 130324029 - MGP_CBAJ_P0040047 Tmtc4 protein_coding protein_coding MGP_CBAJ_T0040048.1 MGP_CBAJ_G0021388.1 mouse_genomes_project 14 130251408 130324029 - MGP_CBAJ_P0040048 Tmtc4 protein_coding protein_coding MGP_CBAJ_T0040049.1 MGP_CBAJ_G0021388.1 mouse_genomes_project 14 130251554 130267679 - Tmtc4 protein_coding processed_transcript MGP_CBAJ_T0040050.1 MGP_CBAJ_G0021388.1 mouse_genomes_project 14 130256453 130260781 - Tmtc4 protein_coding retained_intron MGP_CBAJ_T0040051.1 MGP_CBAJ_G0021388.1 mouse_genomes_project 14 130264132 130324127 - Tmtc4 protein_coding retained_intron MGP_CBAJ_T0040052.1 MGP_CBAJ_G0021388.1 mouse_genomes_project 14 130276394 130324162 - MGP_CBAJ_P0040052 Tmtc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040053.1 MGP_CBAJ_G0021388.1 mouse_genomes_project 14 130311654 130324056 - Tmtc4 protein_coding processed_transcript MGP_CBAJ_T0039455.1 MGP_CBAJ_G0021167.1 mouse_genomes_project 14 62222352 62236216 - MGP_CBAJ_P0039455 Neil2 protein_coding protein_coding MGP_CBAJ_T0002655.1 MGP_CBAJ_G0002535.1 mouse_genomes_project 14 51072445 51072613 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0038342.1 MGP_CBAJ_G0020815.1 mouse_genomes_project 14 26030359 26080377 + MGP_CBAJ_P0038342 Nek4 protein_coding protein_coding MGP_CBAJ_T0039047.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52580450 52594356 - MGP_CBAJ_P0039047 Acin1 protein_coding protein_coding MGP_CBAJ_T0039048.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52580450 52594328 - MGP_CBAJ_P0039048 Acin1 protein_coding protein_coding MGP_CBAJ_T0039049.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52580450 52594277 - MGP_CBAJ_P0039049 Acin1 protein_coding protein_coding MGP_CBAJ_T0039050.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52580450 52646382 - MGP_CBAJ_P0039050 Acin1 protein_coding protein_coding MGP_CBAJ_T0039051.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52580451 52594362 - MGP_CBAJ_P0039051 Acin1 protein_coding protein_coding MGP_CBAJ_T0039052.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52580451 52646067 - MGP_CBAJ_P0039052 Acin1 protein_coding protein_coding MGP_CBAJ_T0039053.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52580456 52594343 - MGP_CBAJ_P0039053 Acin1 protein_coding protein_coding MGP_CBAJ_T0039054.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52581018 52593899 - MGP_CBAJ_P0039054 Acin1 protein_coding protein_coding MGP_CBAJ_T0039055.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52581018 52646382 - MGP_CBAJ_P0039055 Acin1 protein_coding protein_coding MGP_CBAJ_T0039056.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52581192 52582828 - Acin1 protein_coding retained_intron MGP_CBAJ_T0039057.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52581578 52582502 - MGP_CBAJ_P0039057 Acin1 protein_coding protein_coding MGP_CBAJ_T0039058.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52582546 52584145 - Acin1 protein_coding retained_intron MGP_CBAJ_T0039059.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52583018 52586830 - Acin1 protein_coding retained_intron MGP_CBAJ_T0039060.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52583278 52584326 - Acin1 protein_coding retained_intron MGP_CBAJ_T0039061.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52583492 52588518 - Acin1 protein_coding processed_transcript MGP_CBAJ_T0039062.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52583584 52586594 - Acin1 protein_coding retained_intron MGP_CBAJ_T0039063.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52584020 52594346 - MGP_CBAJ_P0039063 Acin1 protein_coding protein_coding MGP_CBAJ_T0039064.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52584834 52588152 - Acin1 protein_coding processed_transcript MGP_CBAJ_T0039065.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52589044 52594342 - Acin1 protein_coding processed_transcript MGP_CBAJ_T0039066.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52589097 52594342 - Acin1 protein_coding processed_transcript MGP_CBAJ_T0039067.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52589659 52609442 - Acin1 protein_coding retained_intron MGP_CBAJ_T0039068.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52589773 52594352 - Acin1 protein_coding retained_intron MGP_CBAJ_T0039069.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52607530 52610409 - Acin1 protein_coding retained_intron MGP_CBAJ_T0039070.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52610857 52645511 - MGP_CBAJ_P0039070 Acin1 protein_coding protein_coding MGP_CBAJ_T0039071.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52631134 52646084 - Acin1 protein_coding processed_transcript MGP_CBAJ_T0039072.1 MGP_CBAJ_G0021031.1 mouse_genomes_project 14 52634659 52646066 - Acin1 protein_coding retained_intron MGP_CBAJ_T0003480.1 MGP_CBAJ_G0003166.1 mouse_genomes_project 14 53652065 53660846 - Gm15932 antisense antisense MGP_CBAJ_T0039416.1 MGP_CBAJ_G0021147.1 mouse_genomes_project 14 59982349 60026597 - MGP_CBAJ_P0039416 Sgcg protein_coding protein_coding MGP_CBAJ_T0039417.1 MGP_CBAJ_G0021147.1 mouse_genomes_project 14 59982734 60026531 - MGP_CBAJ_P0039417 Sgcg protein_coding protein_coding MGP_CBAJ_T0039418.1 MGP_CBAJ_G0021147.1 mouse_genomes_project 14 59984106 59993743 - MGP_CBAJ_P0039418 Sgcg protein_coding protein_coding MGP_CBAJ_T0098280.1 MGP_CBAJ_G0036549.1 mouse_genomes_project 14 43747808 43760601 + sense_intronic sense_intronic MGP_CBAJ_T0037900.1 MGP_CBAJ_G0020689.1 mouse_genomes_project 14 458153 528098 + MGP_CBAJ_P0037900 Pxk protein_coding protein_coding MGP_CBAJ_T0037901.1 MGP_CBAJ_G0020689.1 mouse_genomes_project 14 458153 528098 + MGP_CBAJ_P0037901 Pxk protein_coding protein_coding MGP_CBAJ_T0038674.1 MGP_CBAJ_G0020913.1 mouse_genomes_project 14 43532184 43542726 + MGP_CBAJ_P0038674 Cdkn3 protein_coding protein_coding MGP_CBAJ_T0038675.1 MGP_CBAJ_G0020913.1 mouse_genomes_project 14 43532283 43542688 + MGP_CBAJ_P0038675 Cdkn3 protein_coding unknown_likely_coding MGP_CBAJ_T0038291.1 MGP_CBAJ_G0020805.1 mouse_genomes_project 14 25492544 25540350 + MGP_CBAJ_P0038291 Dcp1a protein_coding protein_coding MGP_CBAJ_T0039757.1 MGP_CBAJ_G0021277.1 mouse_genomes_project 14 75345043 75420887 + MGP_CBAJ_P0039757 Lcp1 protein_coding protein_coding MGP_CBAJ_T0039758.1 MGP_CBAJ_G0021277.1 mouse_genomes_project 14 75345101 75364910 + Lcp1 protein_coding processed_transcript MGP_CBAJ_T0039759.1 MGP_CBAJ_G0021277.1 mouse_genomes_project 14 75345101 75421957 + MGP_CBAJ_P0039759 Lcp1 protein_coding protein_coding MGP_CBAJ_T0039760.1 MGP_CBAJ_G0021277.1 mouse_genomes_project 14 75345441 75421906 + MGP_CBAJ_P0039760 Lcp1 protein_coding protein_coding MGP_CBAJ_T0039761.1 MGP_CBAJ_G0021277.1 mouse_genomes_project 14 75345496 75451242 + MGP_CBAJ_P0039761 Lcp1 protein_coding protein_coding MGP_CBAJ_T0039762.1 MGP_CBAJ_G0021277.1 mouse_genomes_project 14 75350270 75452288 + MGP_CBAJ_P0039762 Lcp1 protein_coding protein_coding MGP_CBAJ_T0039763.1 MGP_CBAJ_G0021277.1 mouse_genomes_project 14 75350413 75421897 + MGP_CBAJ_P0039763 Lcp1 protein_coding protein_coding MGP_CBAJ_T0039764.1 MGP_CBAJ_G0021277.1 mouse_genomes_project 14 75393929 75397008 + Lcp1 protein_coding retained_intron MGP_CBAJ_T0039765.1 MGP_CBAJ_G0021277.1 mouse_genomes_project 14 75395190 75419585 + Lcp1 protein_coding processed_transcript MGP_CBAJ_T0039766.1 MGP_CBAJ_G0021277.1 mouse_genomes_project 14 75411730 75452262 + MGP_CBAJ_P0039766 Lcp1 protein_coding protein_coding MGP_CBAJ_T0039767.1 MGP_CBAJ_G0021277.1 mouse_genomes_project 14 75419342 75420809 + Lcp1 protein_coding processed_transcript MGP_CBAJ_T0002584.1 MGP_CBAJ_G0002477.1 mouse_genomes_project 14 50980678 50981186 + MGP_CBAJ_P0002584 TR_V_gene TR_V_gene MGP_CBAJ_T0012856.1 MGP_CBAJ_G0010968.1 mouse_genomes_project 14 58802378 58802583 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100096.1 MGP_CBAJ_G0038351.1 mouse_genomes_project 14 28574031 28574160 + Gm25498 snoRNA snoRNA MGP_CBAJ_T0100087.1 MGP_CBAJ_G0038342.1 mouse_genomes_project 14 12353587 12353722 + Gm22499 snoRNA snoRNA MGP_CBAJ_T0039479.1 MGP_CBAJ_G0021177.1 mouse_genomes_project 14 63132611 63181614 + MGP_CBAJ_P0039479 Rp1l1 protein_coding protein_coding MGP_CBAJ_T0100122.1 MGP_CBAJ_G0038377.1 mouse_genomes_project 14 91966564 91966696 + Gm25415 snoRNA snoRNA MGP_CBAJ_T0038411.1 MGP_CBAJ_G0020824.1 mouse_genomes_project 14 26324723 26328145 + MGP_CBAJ_P0038411 Tnnc1 protein_coding protein_coding MGP_CBAJ_T0038412.1 MGP_CBAJ_G0020824.1 mouse_genomes_project 14 26324741 26328052 + MGP_CBAJ_P0038412 Tnnc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038413.1 MGP_CBAJ_G0020824.1 mouse_genomes_project 14 26324743 26327409 + Tnnc1 protein_coding retained_intron MGP_CBAJ_T0038571.1 MGP_CBAJ_G0020877.1 mouse_genomes_project 14 29886637 29982798 - MGP_CBAJ_P0038571 Bmpr1a protein_coding protein_coding MGP_CBAJ_T0038572.1 MGP_CBAJ_G0020877.1 mouse_genomes_project 14 29890389 29940840 - MGP_CBAJ_P0038572 Bmpr1a protein_coding protein_coding MGP_CBAJ_T0038573.1 MGP_CBAJ_G0020877.1 mouse_genomes_project 14 29910368 29983452 - MGP_CBAJ_P0038573 Bmpr1a protein_coding protein_coding MGP_CBAJ_T0038574.1 MGP_CBAJ_G0020877.1 mouse_genomes_project 14 29924478 29982639 - MGP_CBAJ_P0038574 Bmpr1a protein_coding protein_coding MGP_CBAJ_T0003463.1 MGP_CBAJ_G0003151.1 mouse_genomes_project 14 29981825 29982795 + Gm17110 antisense antisense MGP_CBAJ_T0037905.1 MGP_CBAJ_G0020692.1 mouse_genomes_project 14 598751 631925 - MGP_CBAJ_P0037905 Acox2 protein_coding protein_coding MGP_CBAJ_T0037906.1 MGP_CBAJ_G0020692.1 mouse_genomes_project 14 598751 632446 - MGP_CBAJ_P0037906 Acox2 protein_coding protein_coding MGP_CBAJ_T0037907.1 MGP_CBAJ_G0020692.1 mouse_genomes_project 14 612525 619474 - Acox2 protein_coding processed_transcript MGP_CBAJ_T0037908.1 MGP_CBAJ_G0020692.1 mouse_genomes_project 14 616637 619501 - Acox2 protein_coding retained_intron MGP_CBAJ_T0037909.1 MGP_CBAJ_G0020692.1 mouse_genomes_project 14 620946 626622 - Acox2 protein_coding retained_intron MGP_CBAJ_T0037910.1 MGP_CBAJ_G0020692.1 mouse_genomes_project 14 626641 630964 - MGP_CBAJ_P0037910 Acox2 protein_coding protein_coding MGP_CBAJ_T0037911.1 MGP_CBAJ_G0020692.1 mouse_genomes_project 14 628286 631247 - Acox2 protein_coding processed_transcript MGP_CBAJ_T0037912.1 MGP_CBAJ_G0020692.1 mouse_genomes_project 14 629015 630027 - Acox2 protein_coding retained_intron MGP_CBAJ_T0038771.1 MGP_CBAJ_G0020934.1 mouse_genomes_project 14 46409661 46642443 - MGP_CBAJ_P0038771 Slc35f4 protein_coding protein_coding MGP_CBAJ_T0038772.1 MGP_CBAJ_G0020934.1 mouse_genomes_project 14 46409661 46642422 - MGP_CBAJ_P0038772 Slc35f4 protein_coding protein_coding MGP_CBAJ_T0038773.1 MGP_CBAJ_G0020934.1 mouse_genomes_project 14 46415262 46426192 - Slc35f4 protein_coding processed_transcript MGP_CBAJ_T0038774.1 MGP_CBAJ_G0020934.1 mouse_genomes_project 14 46424072 46642603 - MGP_CBAJ_P0038774 Slc35f4 protein_coding protein_coding MGP_CBAJ_T0038775.1 MGP_CBAJ_G0020934.1 mouse_genomes_project 14 46429037 46642410 - Slc35f4 protein_coding retained_intron MGP_CBAJ_T0006604.1 MGP_CBAJ_G0005453.1 mouse_genomes_project 14 52244051 52246225 - 5330426L24Rik lincRNA lincRNA MGP_CBAJ_T0009883.1 MGP_CBAJ_G0008021.1 mouse_genomes_project 14 73161162 73161251 - Mir687 miRNA miRNA MGP_CBAJ_T0038705.1 MGP_CBAJ_G0020923.1 mouse_genomes_project 14 44251030 44257520 - MGP_CBAJ_P0038705 Dlgap5 protein_coding protein_coding MGP_CBAJ_T0038706.1 MGP_CBAJ_G0020923.1 mouse_genomes_project 14 44251252 44290284 - MGP_CBAJ_P0038706 Dlgap5 protein_coding protein_coding MGP_CBAJ_T0038707.1 MGP_CBAJ_G0020923.1 mouse_genomes_project 14 44251968 44290210 - Dlgap5 protein_coding retained_intron MGP_CBAJ_T0038708.1 MGP_CBAJ_G0020923.1 mouse_genomes_project 14 44253088 44290240 - Dlgap5 protein_coding retained_intron MGP_CBAJ_T0038709.1 MGP_CBAJ_G0020923.1 mouse_genomes_project 14 44257115 44259232 - Dlgap5 protein_coding retained_intron MGP_CBAJ_T0038710.1 MGP_CBAJ_G0020923.1 mouse_genomes_project 14 44262047 44277811 - MGP_CBAJ_P0038710 Dlgap5 protein_coding protein_coding MGP_CBAJ_T0038711.1 MGP_CBAJ_G0020923.1 mouse_genomes_project 14 44285629 44290233 - Dlgap5 protein_coding retained_intron MGP_CBAJ_T0038712.1 MGP_CBAJ_G0020923.1 mouse_genomes_project 14 44286161 44288546 - Dlgap5 protein_coding processed_transcript MGP_CBAJ_T0039408.1 MGP_CBAJ_G0021145.1 mouse_genomes_project 14 59685772 59774005 - MGP_CBAJ_P0039408 Tnfrsf19 protein_coding protein_coding MGP_CBAJ_T0039409.1 MGP_CBAJ_G0021145.1 mouse_genomes_project 14 59685772 59784825 - MGP_CBAJ_P0039409 Tnfrsf19 protein_coding protein_coding MGP_CBAJ_T0098281.1 MGP_CBAJ_G0036550.1 mouse_genomes_project 14 54942962 54944210 - C030013D06Rik sense_intronic sense_intronic MGP_CBAJ_T0039521.1 MGP_CBAJ_G0021195.1 mouse_genomes_project 14 65182914 65215408 + MGP_CBAJ_P0039521 Ccdc25 protein_coding protein_coding MGP_CBAJ_T0002464.1 MGP_CBAJ_G0002373.1 mouse_genomes_project 14 52040817 52040881 + Traj59 TR_J_gene processed_transcript MGP_CBAJ_T0002465.1 MGP_CBAJ_G0002373.1 mouse_genomes_project 14 52040817 52040879 + MGP_CBAJ_P0002465 Traj59 TR_J_gene TR_J_gene MGP_CBAJ_T0038800.1 MGP_CBAJ_G0020955.1 mouse_genomes_project 14 47656646 47657582 + MGP_CBAJ_P0038800 Olfr740 protein_coding protein_coding MGP_CBAJ_T0039308.1 MGP_CBAJ_G0021113.1 mouse_genomes_project 14 55398615 55401993 - MGP_CBAJ_P0039308 Gm4491 protein_coding protein_coding MGP_CBAJ_T0097956.1 MGP_CBAJ_G0036229.1 mouse_genomes_project 14 107000432 107000480 + Gm23764 rRNA rRNA MGP_CBAJ_T0002490.1 MGP_CBAJ_G0002395.1 mouse_genomes_project 14 52069849 52069906 + MGP_CBAJ_P0002490 Traj33 TR_J_gene TR_J_gene MGP_CBAJ_T0039111.1 MGP_CBAJ_G0021047.1 mouse_genomes_project 14 53056220 53064773 + MGP_CBAJ_P0039111 Ngdn protein_coding protein_coding MGP_CBAJ_T0039008.1 MGP_CBAJ_G0021017.1 mouse_genomes_project 14 52266662 52307510 - MGP_CBAJ_P0039008 Slc7a7 protein_coding protein_coding MGP_CBAJ_T0039009.1 MGP_CBAJ_G0021017.1 mouse_genomes_project 14 52266664 52315603 - MGP_CBAJ_P0039009 Slc7a7 protein_coding protein_coding MGP_CBAJ_T0039010.1 MGP_CBAJ_G0021017.1 mouse_genomes_project 14 52266665 52308416 - MGP_CBAJ_P0039010 Slc7a7 protein_coding protein_coding MGP_CBAJ_T0039011.1 MGP_CBAJ_G0021017.1 mouse_genomes_project 14 52270572 52280976 - Slc7a7 protein_coding processed_transcript MGP_CBAJ_T0039012.1 MGP_CBAJ_G0021017.1 mouse_genomes_project 14 52271021 52294534 - Slc7a7 protein_coding processed_transcript MGP_CBAJ_T0039013.1 MGP_CBAJ_G0021017.1 mouse_genomes_project 14 52275806 52308800 - MGP_CBAJ_P0039013 Slc7a7 protein_coding protein_coding MGP_CBAJ_T0039014.1 MGP_CBAJ_G0021017.1 mouse_genomes_project 14 52306868 52310366 - MGP_CBAJ_P0039014 Slc7a7 protein_coding protein_coding MGP_CBAJ_T0039015.1 MGP_CBAJ_G0021017.1 mouse_genomes_project 14 52307005 52315684 - MGP_CBAJ_P0039015 Slc7a7 protein_coding protein_coding MGP_CBAJ_T0038797.1 MGP_CBAJ_G0020952.1 mouse_genomes_project 14 47601216 47602152 + MGP_CBAJ_P0038797 Olfr738 protein_coding protein_coding MGP_CBAJ_T0038808.1 MGP_CBAJ_G0020963.1 mouse_genomes_project 14 48038009 48044418 - MGP_CBAJ_P0038808 Ccnb1ip1 protein_coding protein_coding MGP_CBAJ_T0039044.1 MGP_CBAJ_G0021028.1 mouse_genomes_project 14 52569598 52579530 - MGP_CBAJ_P0039044 Cdh24 protein_coding unknown_likely_coding MGP_CBAJ_T0038608.1 MGP_CBAJ_G0020889.1 mouse_genomes_project 14 32881867 32896647 - 2610528A11Rik protein_coding processed_transcript MGP_CBAJ_T0038609.1 MGP_CBAJ_G0020889.1 mouse_genomes_project 14 32881869 32892726 - MGP_CBAJ_P0038609 2610528A11Rik protein_coding protein_coding MGP_CBAJ_T0039853.1 MGP_CBAJ_G0021318.1 mouse_genomes_project 14 89353117 89458211 + MGP_CBAJ_P0039853 Tdrd3 protein_coding protein_coding MGP_CBAJ_T0039854.1 MGP_CBAJ_G0021318.1 mouse_genomes_project 14 89353117 89488502 + MGP_CBAJ_P0039854 Tdrd3 protein_coding protein_coding MGP_CBAJ_T0039855.1 MGP_CBAJ_G0021318.1 mouse_genomes_project 14 89353144 89488515 + MGP_CBAJ_P0039855 Tdrd3 protein_coding protein_coding MGP_CBAJ_T0039856.1 MGP_CBAJ_G0021318.1 mouse_genomes_project 14 89402401 89424962 + MGP_CBAJ_P0039856 Tdrd3 protein_coding protein_coding MGP_CBAJ_T0039857.1 MGP_CBAJ_G0021318.1 mouse_genomes_project 14 89416763 89430443 + MGP_CBAJ_P0039857 Tdrd3 protein_coding protein_coding MGP_CBAJ_T0039506.1 MGP_CBAJ_G0021188.1 mouse_genomes_project 14 64631425 64671522 + MGP_CBAJ_P0039506 Zfp395 protein_coding protein_coding MGP_CBAJ_T0002492.1 MGP_CBAJ_G0002397.1 mouse_genomes_project 14 52072293 52072350 + MGP_CBAJ_P0002492 Traj31 TR_J_gene TR_J_gene MGP_CBAJ_T0039898.1 MGP_CBAJ_G0021335.1 mouse_genomes_project 14 105888095 106110800 + MGP_CBAJ_P0039898 Lmo7 protein_coding protein_coding MGP_CBAJ_T0039899.1 MGP_CBAJ_G0021335.1 mouse_genomes_project 14 105995756 106053152 + Lmo7 protein_coding processed_transcript MGP_CBAJ_T0039900.1 MGP_CBAJ_G0021335.1 mouse_genomes_project 14 106005294 106110779 + MGP_CBAJ_P0039900 Lmo7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039901.1 MGP_CBAJ_G0021335.1 mouse_genomes_project 14 106007019 106065840 + MGP_CBAJ_P0039901 Lmo7 protein_coding protein_coding MGP_CBAJ_T0039902.1 MGP_CBAJ_G0021335.1 mouse_genomes_project 14 106007079 106056735 + Lmo7 protein_coding processed_transcript MGP_CBAJ_T0039903.1 MGP_CBAJ_G0021335.1 mouse_genomes_project 14 106007289 106058154 + Lmo7 protein_coding retained_intron MGP_CBAJ_T0039904.1 MGP_CBAJ_G0021335.1 mouse_genomes_project 14 106007430 106110777 + MGP_CBAJ_P0039904 Lmo7 protein_coding protein_coding MGP_CBAJ_T0039905.1 MGP_CBAJ_G0021335.1 mouse_genomes_project 14 106007601 106085738 + Lmo7 protein_coding retained_intron MGP_CBAJ_T0039906.1 MGP_CBAJ_G0021335.1 mouse_genomes_project 14 106041806 106056538 + Lmo7 protein_coding processed_transcript MGP_CBAJ_T0039907.1 MGP_CBAJ_G0021335.1 mouse_genomes_project 14 106049144 106110616 + MGP_CBAJ_P0039907 Lmo7 protein_coding protein_coding MGP_CBAJ_T0039908.1 MGP_CBAJ_G0021335.1 mouse_genomes_project 14 106053161 106110285 + MGP_CBAJ_P0039908 Lmo7 protein_coding protein_coding MGP_CBAJ_T0039909.1 MGP_CBAJ_G0021335.1 mouse_genomes_project 14 106056407 106072448 + Lmo7 protein_coding retained_intron MGP_CBAJ_T0039910.1 MGP_CBAJ_G0021335.1 mouse_genomes_project 14 106056439 106060521 + Lmo7 protein_coding retained_intron MGP_CBAJ_T0039911.1 MGP_CBAJ_G0021335.1 mouse_genomes_project 14 106092236 106106850 + Lmo7 protein_coding retained_intron MGP_CBAJ_T0039912.1 MGP_CBAJ_G0021335.1 mouse_genomes_project 14 106102392 106109227 + Lmo7 protein_coding processed_transcript MGP_CBAJ_T0039913.1 MGP_CBAJ_G0021335.1 mouse_genomes_project 14 106105350 106108956 + Lmo7 protein_coding processed_transcript MGP_CBAJ_T0101642.1 MGP_CBAJ_G0039673.1 mouse_genomes_project 14 48437745 48438200 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0003478.1 MGP_CBAJ_G0003164.1 mouse_genomes_project 14 53098394 53116917 + Gm20687 antisense antisense MGP_CBAJ_T0038184.1 MGP_CBAJ_G0020770.1 mouse_genomes_project 14 20299841 20350836 + MGP_CBAJ_P0038184 Anxa11 protein_coding protein_coding MGP_CBAJ_T0038185.1 MGP_CBAJ_G0020770.1 mouse_genomes_project 14 20299868 20350836 + Anxa11 protein_coding retained_intron MGP_CBAJ_T0038186.1 MGP_CBAJ_G0020770.1 mouse_genomes_project 14 20299868 20343161 + Anxa11 protein_coding retained_intron MGP_CBAJ_T0038187.1 MGP_CBAJ_G0020770.1 mouse_genomes_project 14 20299868 20343554 + MGP_CBAJ_P0038187 Anxa11 protein_coding protein_coding MGP_CBAJ_T0002609.1 MGP_CBAJ_G0002497.1 mouse_genomes_project 14 51951979 51952590 + MGP_CBAJ_P0002609 Trdv4 TR_V_gene TR_V_gene MGP_CBAJ_T0038172.1 MGP_CBAJ_G0020767.1 mouse_genomes_project 14 19890288 19974957 + Zmiz1 protein_coding retained_intron MGP_CBAJ_T0038173.1 MGP_CBAJ_G0020767.1 mouse_genomes_project 14 19890327 20112101 + MGP_CBAJ_P0038173 Zmiz1 protein_coding protein_coding MGP_CBAJ_T0038174.1 MGP_CBAJ_G0020767.1 mouse_genomes_project 14 19890370 20110077 + MGP_CBAJ_P0038174 Zmiz1 protein_coding protein_coding MGP_CBAJ_T0038175.1 MGP_CBAJ_G0020767.1 mouse_genomes_project 14 19890395 20092306 + Zmiz1 protein_coding retained_intron MGP_CBAJ_T0038176.1 MGP_CBAJ_G0020767.1 mouse_genomes_project 14 19890658 20011257 + Zmiz1 protein_coding processed_transcript MGP_CBAJ_T0038177.1 MGP_CBAJ_G0020767.1 mouse_genomes_project 14 20049233 20086362 + Zmiz1 protein_coding processed_transcript MGP_CBAJ_T0038178.1 MGP_CBAJ_G0020767.1 mouse_genomes_project 14 20049714 20088465 + MGP_CBAJ_P0038178 Zmiz1 protein_coding protein_coding MGP_CBAJ_T0038179.1 MGP_CBAJ_G0020767.1 mouse_genomes_project 14 20102188 20103764 + Zmiz1 protein_coding retained_intron MGP_CBAJ_T0006623.1 MGP_CBAJ_G0005467.1 mouse_genomes_project 14 69325253 69338274 + 4930480K23Rik lincRNA lincRNA MGP_CBAJ_T0006624.1 MGP_CBAJ_G0005467.1 mouse_genomes_project 14 69325303 69360882 + 4930480K23Rik lincRNA lincRNA MGP_CBAJ_T0039328.1 MGP_CBAJ_G0021120.1 mouse_genomes_project 14 56017067 56142223 - MGP_CBAJ_P0039328 Lats2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039331.1 MGP_CBAJ_G0021120.1 mouse_genomes_project 14 56072054 56142243 - MGP_CBAJ_P0039331 Lats2 protein_coding protein_coding MGP_CBAJ_T0039332.1 MGP_CBAJ_G0021120.1 mouse_genomes_project 14 56073490 56142241 - MGP_CBAJ_P0039332 Lats2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039333.1 MGP_CBAJ_G0021120.1 mouse_genomes_project 14 56083844 56142225 - MGP_CBAJ_P0039333 Lats2 protein_coding protein_coding MGP_CBAJ_T0039334.1 MGP_CBAJ_G0021120.1 mouse_genomes_project 14 56087527 56090079 - MGP_CBAJ_P0039334 Lats2 protein_coding protein_coding MGP_CBAJ_T0039335.1 MGP_CBAJ_G0021120.1 mouse_genomes_project 14 56094350 56154496 - MGP_CBAJ_P0039335 Lats2 protein_coding protein_coding MGP_CBAJ_T0039336.1 MGP_CBAJ_G0021120.1 mouse_genomes_project 14 56113538 56128691 - MGP_CBAJ_P0039336 Lats2 protein_coding protein_coding MGP_CBAJ_T0039337.1 MGP_CBAJ_G0021120.1 mouse_genomes_project 14 56113538 56128691 - MGP_CBAJ_P0039337 Lats2 protein_coding protein_coding MGP_CBAJ_T0039338.1 MGP_CBAJ_G0021120.1 mouse_genomes_project 14 56128570 56140774 - MGP_CBAJ_P0039338 Lats2 protein_coding protein_coding MGP_CBAJ_T0039339.1 MGP_CBAJ_G0021120.1 mouse_genomes_project 14 56128643 56142698 - Lats2 protein_coding processed_transcript MGP_CBAJ_T0002485.1 MGP_CBAJ_G0002390.1 mouse_genomes_project 14 52064448 52064511 + MGP_CBAJ_P0002485 Traj39 TR_J_gene TR_J_gene MGP_CBAJ_T0002565.1 MGP_CBAJ_G0002460.1 mouse_genomes_project 14 50358695 50359287 + MGP_CBAJ_P0002565 Trav7d-3 TR_V_gene TR_V_gene MGP_CBAJ_T0038625.1 MGP_CBAJ_G0020895.1 mouse_genomes_project 14 37310268 37324200 - MGP_CBAJ_P0038625 Dydc2 protein_coding protein_coding MGP_CBAJ_T0039344.1 MGP_CBAJ_G0021122.1 mouse_genomes_project 14 56203472 56225881 - MGP_CBAJ_P0039344 Ska3 protein_coding protein_coding MGP_CBAJ_T0003514.1 MGP_CBAJ_G0003189.1 mouse_genomes_project 14 130290485 130294705 + Gm15735 antisense antisense MGP_CBAJ_T0100104.1 MGP_CBAJ_G0038359.1 mouse_genomes_project 14 53212337 53212469 - Gm23596 snoRNA snoRNA MGP_CBAJ_T0039443.1 MGP_CBAJ_G0021162.1 mouse_genomes_project 14 62023254 62031641 + MGP_CBAJ_P0039443 Defb43 protein_coding protein_coding MGP_CBAJ_T0038809.1 MGP_CBAJ_G0020964.1 mouse_genomes_project 14 48067774 48083944 + MGP_CBAJ_P0038809 Parp2 protein_coding protein_coding MGP_CBAJ_T0038747.1 MGP_CBAJ_G0020929.1 mouse_genomes_project 14 45701540 45709153 - MGP_CBAJ_P0038747 Otx2 protein_coding protein_coding MGP_CBAJ_T0038748.1 MGP_CBAJ_G0020929.1 mouse_genomes_project 14 45702034 45706749 - MGP_CBAJ_P0038748 Otx2 protein_coding protein_coding MGP_CBAJ_T0038749.1 MGP_CBAJ_G0020929.1 mouse_genomes_project 14 45702034 45711419 - MGP_CBAJ_P0038749 Otx2 protein_coding protein_coding MGP_CBAJ_T0038750.1 MGP_CBAJ_G0020929.1 mouse_genomes_project 14 45702780 45705809 - MGP_CBAJ_P0038750 Otx2 protein_coding protein_coding MGP_CBAJ_T0038751.1 MGP_CBAJ_G0020929.1 mouse_genomes_project 14 45702817 45711550 - MGP_CBAJ_P0038751 Otx2 protein_coding protein_coding MGP_CBAJ_T0038752.1 MGP_CBAJ_G0020929.1 mouse_genomes_project 14 45703169 45711414 - MGP_CBAJ_P0038752 Otx2 protein_coding protein_coding MGP_CBAJ_T0038753.1 MGP_CBAJ_G0020929.1 mouse_genomes_project 14 45705222 45711414 - MGP_CBAJ_P0038753 Otx2 protein_coding protein_coding MGP_CBAJ_T0038754.1 MGP_CBAJ_G0020929.1 mouse_genomes_project 14 45705272 45709428 - MGP_CBAJ_P0038754 Otx2 protein_coding protein_coding MGP_CBAJ_T0038495.1 MGP_CBAJ_G0020844.1 mouse_genomes_project 14 27439276 27482985 + Parg protein_coding retained_intron MGP_CBAJ_T0038496.1 MGP_CBAJ_G0020844.1 mouse_genomes_project 14 27439276 27543076 + MGP_CBAJ_P0038496 Parg protein_coding protein_coding MGP_CBAJ_T0038497.1 MGP_CBAJ_G0020844.1 mouse_genomes_project 14 27439276 27544635 + MGP_CBAJ_P0038497 Parg protein_coding protein_coding MGP_CBAJ_T0038498.1 MGP_CBAJ_G0020844.1 mouse_genomes_project 14 27439276 27544965 + MGP_CBAJ_P0038498 Parg protein_coding protein_coding MGP_CBAJ_T0038499.1 MGP_CBAJ_G0020844.1 mouse_genomes_project 14 27439298 27446603 + MGP_CBAJ_P0038499 Parg protein_coding protein_coding MGP_CBAJ_T0038500.1 MGP_CBAJ_G0020844.1 mouse_genomes_project 14 27439359 27544635 + MGP_CBAJ_P0038500 Parg protein_coding nonsense_mediated_decay MGP_CBAJ_T0038501.1 MGP_CBAJ_G0020844.1 mouse_genomes_project 14 27439763 27446554 + Parg protein_coding processed_transcript MGP_CBAJ_T0038502.1 MGP_CBAJ_G0020844.1 mouse_genomes_project 14 27451768 27482150 + MGP_CBAJ_P0038502 Parg protein_coding nonsense_mediated_decay MGP_CBAJ_T0038503.1 MGP_CBAJ_G0020844.1 mouse_genomes_project 14 27482057 27505521 + Parg protein_coding processed_transcript MGP_CBAJ_T0038504.1 MGP_CBAJ_G0020844.1 mouse_genomes_project 14 27518455 27543759 + Parg protein_coding processed_transcript MGP_CBAJ_T0039260.1 MGP_CBAJ_G0021079.1 mouse_genomes_project 14 53864709 53866511 + MGP_CBAJ_P0039260 Ltb4r2 protein_coding protein_coding MGP_CBAJ_T0100141.1 MGP_CBAJ_G0038396.1 mouse_genomes_project 14 124998244 124998372 + Gm23669 snoRNA snoRNA MGP_CBAJ_T0012844.1 MGP_CBAJ_G0010956.1 mouse_genomes_project 14 50969630 50969937 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006593.1 MGP_CBAJ_G0005446.1 mouse_genomes_project 14 45713168 45855062 + Otx2os1 lincRNA lincRNA MGP_CBAJ_T0006594.1 MGP_CBAJ_G0005446.1 mouse_genomes_project 14 45714039 45778328 + Otx2os1 lincRNA lincRNA MGP_CBAJ_T0006595.1 MGP_CBAJ_G0005446.1 mouse_genomes_project 14 45714144 45775901 + Otx2os1 lincRNA lincRNA MGP_CBAJ_T0098867.1 MGP_CBAJ_G0037122.1 mouse_genomes_project 14 108995812 108995919 + Gm22021 snRNA snRNA MGP_CBAJ_T0003438.1 MGP_CBAJ_G0003135.1 mouse_genomes_project 14 3298989 3335893 + Fhitos antisense antisense MGP_CBAJ_T0000882.1 MGP_CBAJ_G0000817.1 mouse_genomes_project 14 60504031 60506178 + TEC TEC MGP_CBAJ_T0038946.1 MGP_CBAJ_G0021002.1 mouse_genomes_project 14 49802220 49823431 - MGP_CBAJ_P0038946 Rab2b protein_coding protein_coding MGP_CBAJ_T0038947.1 MGP_CBAJ_G0021002.1 mouse_genomes_project 14 49802227 49823184 - MGP_CBAJ_P0038947 Rab2b protein_coding protein_coding MGP_CBAJ_T0038948.1 MGP_CBAJ_G0021002.1 mouse_genomes_project 14 49802230 49810721 - Rab2b protein_coding retained_intron MGP_CBAJ_T0038949.1 MGP_CBAJ_G0021002.1 mouse_genomes_project 14 49802232 49823225 - MGP_CBAJ_P0038949 Rab2b protein_coding protein_coding MGP_CBAJ_T0038950.1 MGP_CBAJ_G0021002.1 mouse_genomes_project 14 49804184 49822544 - Rab2b protein_coding processed_transcript MGP_CBAJ_T0038951.1 MGP_CBAJ_G0021002.1 mouse_genomes_project 14 49804184 49823127 - MGP_CBAJ_P0038951 Rab2b protein_coding nonsense_mediated_decay MGP_CBAJ_T0038952.1 MGP_CBAJ_G0021002.1 mouse_genomes_project 14 49804184 49823127 - MGP_CBAJ_P0038952 Rab2b protein_coding nonsense_mediated_decay MGP_CBAJ_T0038953.1 MGP_CBAJ_G0021002.1 mouse_genomes_project 14 49805224 49816952 - MGP_CBAJ_P0038953 Rab2b protein_coding nonsense_mediated_decay MGP_CBAJ_T0040002.1 MGP_CBAJ_G0021371.1 mouse_genomes_project 14 127942074 127978912 + MGP_CBAJ_P0040002 Ipo5 protein_coding protein_coding MGP_CBAJ_T0038668.1 MGP_CBAJ_G0020911.1 mouse_genomes_project 14 43110145 43114154 + Gm15217 protein_coding processed_transcript MGP_CBAJ_T0038669.1 MGP_CBAJ_G0020911.1 mouse_genomes_project 14 43110198 43114344 + MGP_CBAJ_P0038669 Gm15217 protein_coding protein_coding MGP_CBAJ_T0038670.1 MGP_CBAJ_G0020911.1 mouse_genomes_project 14 43111856 43114104 + Gm15217 protein_coding processed_transcript MGP_CBAJ_T0039843.1 MGP_CBAJ_G0021313.1 mouse_genomes_project 14 80598049 80602585 - MGP_CBAJ_P0039843 Pcdh8 protein_coding protein_coding MGP_CBAJ_T0039844.1 MGP_CBAJ_G0021313.1 mouse_genomes_project 14 80598054 80602585 - MGP_CBAJ_P0039844 Pcdh8 protein_coding protein_coding MGP_CBAJ_T0039845.1 MGP_CBAJ_G0021313.1 mouse_genomes_project 14 80598058 80602585 - Pcdh8 protein_coding retained_intron MGP_CBAJ_T0039846.1 MGP_CBAJ_G0021313.1 mouse_genomes_project 14 80600304 80602477 - Pcdh8 protein_coding processed_transcript MGP_CBAJ_T0038250.1 MGP_CBAJ_G0020788.1 mouse_genomes_project 14 21532132 21553838 + MGP_CBAJ_P0038250 Asb14 protein_coding protein_coding MGP_CBAJ_T0038251.1 MGP_CBAJ_G0020788.1 mouse_genomes_project 14 21532177 21552998 + MGP_CBAJ_P0038251 Asb14 protein_coding protein_coding MGP_CBAJ_T0038252.1 MGP_CBAJ_G0020788.1 mouse_genomes_project 14 21532187 21538523 + Asb14 protein_coding processed_transcript MGP_CBAJ_T0038253.1 MGP_CBAJ_G0020788.1 mouse_genomes_project 14 21532195 21540723 + MGP_CBAJ_P0038253 Asb14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0038254.1 MGP_CBAJ_G0020788.1 mouse_genomes_project 14 21540672 21553839 + MGP_CBAJ_P0038254 Asb14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012861.1 MGP_CBAJ_G0010973.1 mouse_genomes_project 14 74906682 74920378 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0037902.1 MGP_CBAJ_G0020690.1 mouse_genomes_project 14 529150 536115 - MGP_CBAJ_P0037902 Pdhb protein_coding protein_coding MGP_CBAJ_T0012862.1 MGP_CBAJ_G0010974.1 mouse_genomes_project 14 74906682 74920376 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0039776.1 MGP_CBAJ_G0021282.1 mouse_genomes_project 14 75932852 75957959 + MGP_CBAJ_P0039776 Erich6b protein_coding protein_coding MGP_CBAJ_T0040020.1 MGP_CBAJ_G0021381.1 mouse_genomes_project 14 129426189 129676683 + MGP_CBAJ_P0040020 Clybl protein_coding protein_coding MGP_CBAJ_T0038646.1 MGP_CBAJ_G0020904.1 mouse_genomes_project 14 41806298 41810498 + Gpr137c protein_coding processed_transcript MGP_CBAJ_T0038647.1 MGP_CBAJ_G0020904.1 mouse_genomes_project 14 41806572 41879298 + MGP_CBAJ_P0038647 Gpr137c protein_coding protein_coding MGP_CBAJ_T0038648.1 MGP_CBAJ_G0020904.1 mouse_genomes_project 14 41859234 41877321 + Gpr137c protein_coding retained_intron MGP_CBAJ_T0039005.1 MGP_CBAJ_G0021016.1 mouse_genomes_project 14 52255437 52261721 + Oxa1l protein_coding retained_intron MGP_CBAJ_T0039006.1 MGP_CBAJ_G0021016.1 mouse_genomes_project 14 52255437 52266894 + MGP_CBAJ_P0039006 Oxa1l protein_coding protein_coding MGP_CBAJ_T0039007.1 MGP_CBAJ_G0021016.1 mouse_genomes_project 14 52255641 52264256 + Oxa1l protein_coding retained_intron MGP_CBAJ_T0039811.1 MGP_CBAJ_G0021296.1 mouse_genomes_project 14 78415646 78468315 - MGP_CBAJ_P0039811 Dnajc15 protein_coding protein_coding MGP_CBAJ_T0039970.1 MGP_CBAJ_G0021358.1 mouse_genomes_project 14 124782597 124805549 - MGP_CBAJ_P0039970 Tgds protein_coding protein_coding MGP_CBAJ_T0039578.1 MGP_CBAJ_G0021213.1 mouse_genomes_project 14 67265284 67306995 - MGP_CBAJ_P0039578 Cdca2 protein_coding protein_coding MGP_CBAJ_T0039579.1 MGP_CBAJ_G0021213.1 mouse_genomes_project 14 67265308 67306764 - MGP_CBAJ_P0039579 Cdca2 protein_coding protein_coding MGP_CBAJ_T0039580.1 MGP_CBAJ_G0021213.1 mouse_genomes_project 14 67266749 67287863 - MGP_CBAJ_P0039580 Cdca2 protein_coding protein_coding MGP_CBAJ_T0039581.1 MGP_CBAJ_G0021213.1 mouse_genomes_project 14 67269256 67306764 - MGP_CBAJ_P0039581 Cdca2 protein_coding protein_coding MGP_CBAJ_T0039582.1 MGP_CBAJ_G0021213.1 mouse_genomes_project 14 67285236 67289110 - MGP_CBAJ_P0039582 Cdca2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039583.1 MGP_CBAJ_G0021213.1 mouse_genomes_project 14 67290064 67306529 - Cdca2 protein_coding retained_intron MGP_CBAJ_T0039584.1 MGP_CBAJ_G0021213.1 mouse_genomes_project 14 67291400 67306835 - MGP_CBAJ_P0039584 Cdca2 protein_coding protein_coding MGP_CBAJ_T0009861.1 MGP_CBAJ_G0007999.1 mouse_genomes_project 14 43741525 43741624 - Mir378c miRNA miRNA MGP_CBAJ_T0012859.1 MGP_CBAJ_G0010971.1 mouse_genomes_project 14 69377103 69382352 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000888.1 MGP_CBAJ_G0000823.1 mouse_genomes_project 14 69190617 69192885 - TEC TEC MGP_CBAJ_T0100097.1 MGP_CBAJ_G0038352.1 mouse_genomes_project 14 29523470 29523559 + Gm24998 snoRNA snoRNA MGP_CBAJ_T0039897.1 MGP_CBAJ_G0021334.1 mouse_genomes_project 14 105887518 105887953 - MGP_CBAJ_P0039897 Gm9922 protein_coding protein_coding MGP_CBAJ_T0101043.1 MGP_CBAJ_G0039270.1 mouse_genomes_project 14 53079117 53083550 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101044.1 MGP_CBAJ_G0039270.1 mouse_genomes_project 14 53082394 53083373 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0002608.1 MGP_CBAJ_G0002496.1 mouse_genomes_project 14 51831948 51832473 + MGP_CBAJ_P0002608 Trav23 TR_V_gene TR_V_gene MGP_CBAJ_T0039464.1 MGP_CBAJ_G0021171.1 mouse_genomes_project 14 62583510 62602896 - MGP_CBAJ_P0039464 Tdh protein_coding protein_coding MGP_CBAJ_T0039465.1 MGP_CBAJ_G0021171.1 mouse_genomes_project 14 62583815 62594147 - MGP_CBAJ_P0039465 Tdh protein_coding nonsense_mediated_decay MGP_CBAJ_T0039466.1 MGP_CBAJ_G0021171.1 mouse_genomes_project 14 62583870 62594147 - MGP_CBAJ_P0039466 Tdh protein_coding nonsense_mediated_decay MGP_CBAJ_T0039467.1 MGP_CBAJ_G0021171.1 mouse_genomes_project 14 62583870 62594147 - MGP_CBAJ_P0039467 Tdh protein_coding nonsense_mediated_decay MGP_CBAJ_T0039468.1 MGP_CBAJ_G0021171.1 mouse_genomes_project 14 62586809 62588331 - Tdh protein_coding retained_intron MGP_CBAJ_T0039469.1 MGP_CBAJ_G0021171.1 mouse_genomes_project 14 62597713 62602560 - Tdh protein_coding processed_transcript MGP_CBAJ_T0040007.1 MGP_CBAJ_G0021373.1 mouse_genomes_project 14 128369014 128480730 - MGP_CBAJ_P0040007 Stk24 protein_coding protein_coding MGP_CBAJ_T0039703.1 MGP_CBAJ_G0021262.1 mouse_genomes_project 14 72904231 72906301 - MGP_CBAJ_P0039703 protein_coding protein_coding MGP_CBAJ_T0097958.1 MGP_CBAJ_G0036231.1 mouse_genomes_project 14 125576783 125576906 - n-R5s51 rRNA rRNA MGP_CBAJ_T0006610.1 MGP_CBAJ_G0005458.1 mouse_genomes_project 14 59154902 59284637 + Gm29266 lincRNA lincRNA MGP_CBAJ_T0017122.1 MGP_CBAJ_G0015008.1 mouse_genomes_project 14 13313649 13315440 + processed_transcript processed_transcript MGP_CBAJ_T0009886.1 MGP_CBAJ_G0008024.1 mouse_genomes_project 14 78855901 78856008 - Gm23652 miRNA miRNA MGP_CBAJ_T0039893.1 MGP_CBAJ_G0021332.1 mouse_genomes_project 14 105767613 105774534 - MGP_CBAJ_P0039893 Commd6 protein_coding protein_coding MGP_CBAJ_T0039894.1 MGP_CBAJ_G0021332.1 mouse_genomes_project 14 105767614 105774319 - MGP_CBAJ_P0039894 Commd6 protein_coding protein_coding MGP_CBAJ_T0039895.1 MGP_CBAJ_G0021332.1 mouse_genomes_project 14 105773903 105774534 - Commd6 protein_coding retained_intron MGP_CBAJ_T0017152.1 MGP_CBAJ_G0015019.1 mouse_genomes_project 14 77132306 77148594 + 1700108F19Rik processed_transcript lincRNA MGP_CBAJ_T0017153.1 MGP_CBAJ_G0015019.1 mouse_genomes_project 14 77136906 77148517 + 1700108F19Rik processed_transcript lincRNA MGP_CBAJ_T0017154.1 MGP_CBAJ_G0015019.1 mouse_genomes_project 14 77136919 77139162 + 1700108F19Rik processed_transcript retained_intron MGP_CBAJ_T0017155.1 MGP_CBAJ_G0015019.1 mouse_genomes_project 14 77136919 77148533 + 1700108F19Rik processed_transcript lincRNA MGP_CBAJ_T0017156.1 MGP_CBAJ_G0015019.1 mouse_genomes_project 14 77136947 77148520 + 1700108F19Rik processed_transcript lincRNA MGP_CBAJ_T0017157.1 MGP_CBAJ_G0015019.1 mouse_genomes_project 14 77136950 77139720 + 1700108F19Rik processed_transcript lincRNA MGP_CBAJ_T0017158.1 MGP_CBAJ_G0015019.1 mouse_genomes_project 14 77136994 77139720 + 1700108F19Rik processed_transcript lincRNA MGP_CBAJ_T0017159.1 MGP_CBAJ_G0015019.1 mouse_genomes_project 14 77141085 77148312 + 1700108F19Rik processed_transcript lincRNA MGP_CBAJ_T0038781.1 MGP_CBAJ_G0020939.1 mouse_genomes_project 14 47168688 47169815 - MGP_CBAJ_P0038781 Olfr725 protein_coding protein_coding MGP_CBAJ_T0006596.1 MGP_CBAJ_G0005447.1 mouse_genomes_project 14 47271547 47273359 + Gm45057 lincRNA lincRNA MGP_CBAJ_T0037919.1 MGP_CBAJ_G0020696.1 mouse_genomes_project 14 2063843 3024407 - MGP_CBAJ_P0037919 Fhit protein_coding protein_coding MGP_CBAJ_T0037920.1 MGP_CBAJ_G0020696.1 mouse_genomes_project 14 2063851 3762491 - MGP_CBAJ_P0037920 Fhit protein_coding protein_coding MGP_CBAJ_T0037921.1 MGP_CBAJ_G0020696.1 mouse_genomes_project 14 2063851 3762494 - MGP_CBAJ_P0037921 Fhit protein_coding protein_coding MGP_CBAJ_T0037922.1 MGP_CBAJ_G0020696.1 mouse_genomes_project 14 2064144 2992544 - MGP_CBAJ_P0037922 Fhit protein_coding protein_coding MGP_CBAJ_T0037923.1 MGP_CBAJ_G0020696.1 mouse_genomes_project 14 2064144 2408835 - MGP_CBAJ_P0037923 Fhit protein_coding unknown_likely_coding MGP_CBAJ_T0037924.1 MGP_CBAJ_G0020696.1 mouse_genomes_project 14 2091238 3721459 - MGP_CBAJ_P0037924 Fhit protein_coding protein_coding MGP_CBAJ_T0037925.1 MGP_CBAJ_G0020696.1 mouse_genomes_project 14 2288689 3721046 - Fhit protein_coding retained_intron MGP_CBAJ_T0037926.1 MGP_CBAJ_G0020696.1 mouse_genomes_project 14 2288796 3721430 - MGP_CBAJ_P0037926 Fhit protein_coding protein_coding MGP_CBAJ_T0037927.1 MGP_CBAJ_G0020696.1 mouse_genomes_project 14 2406579 3762494 - MGP_CBAJ_P0037927 Fhit protein_coding protein_coding MGP_CBAJ_T0098857.1 MGP_CBAJ_G0037112.1 mouse_genomes_project 14 88196337 88196477 + Gm25115 snRNA snRNA MGP_CBAJ_T0038791.1 MGP_CBAJ_G0020949.1 mouse_genomes_project 14 47523676 47524627 - Olfr735 protein_coding transcribed_unprocessed_pseudogene MGP_CBAJ_T0038792.1 MGP_CBAJ_G0020949.1 mouse_genomes_project 14 47523676 47524741 - MGP_CBAJ_P0038792 Olfr735 protein_coding protein_coding MGP_CBAJ_T0038793.1 MGP_CBAJ_G0020949.1 mouse_genomes_project 14 47524079 47528251 - Olfr735 protein_coding processed_transcript MGP_CBAJ_T0002559.1 MGP_CBAJ_G0002457.1 mouse_genomes_project 14 50281521 50281975 + MGP_CBAJ_P0002559 Trav6-2 TR_V_gene TR_V_gene MGP_CBAJ_T0002560.1 MGP_CBAJ_G0002457.1 mouse_genomes_project 14 50281521 50281975 + MGP_CBAJ_P0002560 Trav6-2 TR_V_gene TR_V_gene MGP_CBAJ_T0038912.1 MGP_CBAJ_G0020998.1 mouse_genomes_project 14 49603951 49634006 - MGP_CBAJ_P0038912 Hnrnpc protein_coding protein_coding MGP_CBAJ_T0038913.1 MGP_CBAJ_G0020998.1 mouse_genomes_project 14 49603951 49634006 - MGP_CBAJ_P0038913 Hnrnpc protein_coding protein_coding MGP_CBAJ_T0039283.1 MGP_CBAJ_G0021097.1 mouse_genomes_project 14 54309466 54315108 - MGP_CBAJ_P0039283 Gzmg protein_coding protein_coding MGP_CBAJ_T0039318.1 MGP_CBAJ_G0021117.1 mouse_genomes_project 14 55875148 55899903 + MGP_CBAJ_P0039318 Il17d protein_coding protein_coding MGP_CBAJ_T0039279.1 MGP_CBAJ_G0021093.1 mouse_genomes_project 14 54219675 54222706 - MGP_CBAJ_P0039279 Mcpt8 protein_coding protein_coding MGP_CBAJ_T0003477.1 MGP_CBAJ_G0003163.1 mouse_genomes_project 14 52994027 52994358 + Gm29015 antisense antisense MGP_CBAJ_T0002561.1 MGP_CBAJ_G0002458.1 mouse_genomes_project 14 50339965 50341634 + MGP_CBAJ_P0002561 TR_V_gene TR_V_gene MGP_CBAJ_T0002564.1 MGP_CBAJ_G0002458.1 mouse_genomes_project 14 50341329 50341634 + MGP_CBAJ_P0002564 TR_V_gene TR_V_gene MGP_CBAJ_T0011243.1 MGP_CBAJ_G0009381.1 mouse_genomes_project 14 27232260 27232357 + Gm26045 misc_RNA misc_RNA MGP_CBAJ_T0039426.1 MGP_CBAJ_G0021154.1 mouse_genomes_project 14 61187820 61254628 + MGP_CBAJ_P0039426 protein_coding protein_coding MGP_CBAJ_T0039427.1 MGP_CBAJ_G0021154.1 mouse_genomes_project 14 61230159 61279032 + MGP_CBAJ_P0039427 protein_coding unknown_likely_coding MGP_CBAJ_T0039428.1 MGP_CBAJ_G0021154.1 mouse_genomes_project 14 61230168 61265138 + MGP_CBAJ_P0039428 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039429.1 MGP_CBAJ_G0021154.1 mouse_genomes_project 14 61248241 61256397 + protein_coding retained_intron MGP_CBAJ_T0038977.1 MGP_CBAJ_G0021006.1 mouse_genomes_project 14 49905594 49906536 - MGP_CBAJ_P0038977 Olfr1513 protein_coding protein_coding MGP_CBAJ_T0098831.1 MGP_CBAJ_G0037086.1 mouse_genomes_project 14 22207908 22208017 + Gm22485 snRNA snRNA MGP_CBAJ_T0100139.1 MGP_CBAJ_G0038394.1 mouse_genomes_project 14 113585997 113586115 + Gm24229 snoRNA snoRNA MGP_CBAJ_T0002463.1 MGP_CBAJ_G0002372.1 mouse_genomes_project 14 52019613 52019672 + MGP_CBAJ_P0002463 Trdj2 TR_J_gene TR_J_gene MGP_CBAJ_T0038072.1 MGP_CBAJ_G0020749.1 mouse_genomes_project 14 14714156 14772554 - MGP_CBAJ_P0038072 Camk2g protein_coding unknown_likely_coding MGP_CBAJ_T0038073.1 MGP_CBAJ_G0020749.1 mouse_genomes_project 14 14714161 14775238 - MGP_CBAJ_P0038073 Camk2g protein_coding protein_coding MGP_CBAJ_T0038074.1 MGP_CBAJ_G0020749.1 mouse_genomes_project 14 14714161 14775238 - MGP_CBAJ_P0038074 Camk2g protein_coding protein_coding MGP_CBAJ_T0038075.1 MGP_CBAJ_G0020749.1 mouse_genomes_project 14 14714161 14775238 - MGP_CBAJ_P0038075 Camk2g protein_coding protein_coding MGP_CBAJ_T0037947.1 MGP_CBAJ_G0020703.1 mouse_genomes_project 14 6565852 6578083 + MGP_CBAJ_P0037947 Sntn protein_coding protein_coding MGP_CBAJ_T0101647.1 MGP_CBAJ_G0039678.1 mouse_genomes_project 14 49334877 49335268 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0101641.1 MGP_CBAJ_G0039672.1 mouse_genomes_project 14 48432263 48432726 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0002562.1 MGP_CBAJ_G0002459.1 mouse_genomes_project 14 50340006 50341634 + MGP_CBAJ_P0002562 TR_V_gene TR_V_gene MGP_CBAJ_T0002563.1 MGP_CBAJ_G0002459.1 mouse_genomes_project 14 50341327 50341634 + MGP_CBAJ_P0002563 TR_V_gene TR_V_gene MGP_CBAJ_T0002497.1 MGP_CBAJ_G0002402.1 mouse_genomes_project 14 52078814 52078874 + MGP_CBAJ_P0002497 Traj26 TR_J_gene TR_J_gene MGP_CBAJ_T0039420.1 MGP_CBAJ_G0021149.1 mouse_genomes_project 14 60111688 60132306 - MGP_CBAJ_P0039420 Ebpl protein_coding protein_coding MGP_CBAJ_T0038606.1 MGP_CBAJ_G0020887.1 mouse_genomes_project 14 32846342 32853489 + MGP_CBAJ_P0038606 Lrit2 protein_coding protein_coding MGP_CBAJ_T0098853.1 MGP_CBAJ_G0037108.1 mouse_genomes_project 14 71992444 71992578 + Gm23735 snRNA snRNA MGP_CBAJ_T0098844.1 MGP_CBAJ_G0037099.1 mouse_genomes_project 14 49899455 49899559 + Gm26328 snRNA snRNA MGP_CBAJ_T0039814.1 MGP_CBAJ_G0021298.1 mouse_genomes_project 14 78687484 78694907 - MGP_CBAJ_P0039814 Fam216b protein_coding protein_coding MGP_CBAJ_T0039815.1 MGP_CBAJ_G0021298.1 mouse_genomes_project 14 78688176 78694899 - MGP_CBAJ_P0039815 Fam216b protein_coding protein_coding MGP_CBAJ_T0039816.1 MGP_CBAJ_G0021298.1 mouse_genomes_project 14 78689206 78694881 - MGP_CBAJ_P0039816 Fam216b protein_coding nonsense_mediated_decay MGP_CBAJ_T0039916.1 MGP_CBAJ_G0021337.1 mouse_genomes_project 14 107262525 107275866 + MGP_CBAJ_P0039916 Acod1 protein_coding protein_coding MGP_CBAJ_T0039997.1 MGP_CBAJ_G0021368.1 mouse_genomes_project 14 126934525 126962490 - MGP_CBAJ_P0039997 Oxgr1 protein_coding protein_coding MGP_CBAJ_T0006563.1 MGP_CBAJ_G0005425.1 mouse_genomes_project 14 17560162 17561515 - A830039N20Rik lincRNA lincRNA MGP_CBAJ_T0002583.1 MGP_CBAJ_G0002476.1 mouse_genomes_project 14 50825013 50924605 + MGP_CBAJ_P0002583 TR_V_gene TR_V_gene MGP_CBAJ_T0039320.1 MGP_CBAJ_G0021119.1 mouse_genomes_project 14 55948743 56046099 - MGP_CBAJ_P0039320 Xpo4 protein_coding protein_coding MGP_CBAJ_T0039321.1 MGP_CBAJ_G0021119.1 mouse_genomes_project 14 55950012 56045625 - MGP_CBAJ_P0039321 Xpo4 protein_coding protein_coding MGP_CBAJ_T0039322.1 MGP_CBAJ_G0021119.1 mouse_genomes_project 14 55970602 56045661 - MGP_CBAJ_P0039322 Xpo4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039323.1 MGP_CBAJ_G0021119.1 mouse_genomes_project 14 56002963 56045625 - MGP_CBAJ_P0039323 Xpo4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039324.1 MGP_CBAJ_G0021119.1 mouse_genomes_project 14 56016769 56045633 - Xpo4 protein_coding processed_transcript MGP_CBAJ_T0039325.1 MGP_CBAJ_G0021119.1 mouse_genomes_project 14 56016775 56045904 - Xpo4 protein_coding retained_intron MGP_CBAJ_T0039326.1 MGP_CBAJ_G0021119.1 mouse_genomes_project 14 56016790 56045636 - Xpo4 protein_coding retained_intron MGP_CBAJ_T0039327.1 MGP_CBAJ_G0021119.1 mouse_genomes_project 14 56017019 56046099 - MGP_CBAJ_P0039327 Xpo4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039329.1 MGP_CBAJ_G0021119.1 mouse_genomes_project 14 56017506 56023648 - Xpo4 protein_coding retained_intron MGP_CBAJ_T0039330.1 MGP_CBAJ_G0021119.1 mouse_genomes_project 14 56022952 56045658 - Xpo4 protein_coding retained_intron MGP_CBAJ_T0039106.1 MGP_CBAJ_G0021045.1 mouse_genomes_project 14 52991684 53023910 - MGP_CBAJ_P0039106 Myh7 protein_coding protein_coding MGP_CBAJ_T0039107.1 MGP_CBAJ_G0021045.1 mouse_genomes_project 14 52991761 53023902 - MGP_CBAJ_P0039107 Myh7 protein_coding protein_coding MGP_CBAJ_T0039109.1 MGP_CBAJ_G0021045.1 mouse_genomes_project 14 53001659 53014490 - Myh7 protein_coding retained_intron MGP_CBAJ_T0039110.1 MGP_CBAJ_G0021045.1 mouse_genomes_project 14 53021991 53023824 - MGP_CBAJ_P0039110 Myh7 protein_coding protein_coding MGP_CBAJ_T0098832.1 MGP_CBAJ_G0037087.1 mouse_genomes_project 14 29045796 29045903 + Gm26228 snRNA snRNA MGP_CBAJ_T0038262.1 MGP_CBAJ_G0020793.1 mouse_genomes_project 14 21928059 22113075 + MGP_CBAJ_P0038262 Arhgef3 protein_coding protein_coding MGP_CBAJ_T0038263.1 MGP_CBAJ_G0020793.1 mouse_genomes_project 14 22043676 22113090 + MGP_CBAJ_P0038263 Arhgef3 protein_coding unknown_likely_coding MGP_CBAJ_T0039671.1 MGP_CBAJ_G0021250.1 mouse_genomes_project 14 70237752 70245474 + MGP_CBAJ_P0039671 Lgi3 protein_coding protein_coding MGP_CBAJ_T0002650.1 MGP_CBAJ_G0002530.1 mouse_genomes_project 14 50560597 50560866 + TR_V_pseudogene TR_V_pseudogene MGP_CBAJ_T0100091.1 MGP_CBAJ_G0038346.1 mouse_genomes_project 14 22249022 22249120 - Gm25697 snoRNA snoRNA MGP_CBAJ_T0039833.1 MGP_CBAJ_G0021308.1 mouse_genomes_project 14 80239663 80245220 + MGP_CBAJ_P0039833 protein_coding protein_coding MGP_CBAJ_T0039562.1 MGP_CBAJ_G0021208.1 mouse_genomes_project 14 66358049 66360192 + MGP_CBAJ_P0039562 Gm5464 protein_coding protein_coding MGP_CBAJ_T0038875.1 MGP_CBAJ_G0020990.1 mouse_genomes_project 14 49387288 49390023 + Slc39a2 protein_coding retained_intron MGP_CBAJ_T0038876.1 MGP_CBAJ_G0020990.1 mouse_genomes_project 14 49387831 49390962 + MGP_CBAJ_P0038876 Slc39a2 protein_coding protein_coding MGP_CBAJ_T0038877.1 MGP_CBAJ_G0020990.1 mouse_genomes_project 14 49387878 49390016 + MGP_CBAJ_P0038877 Slc39a2 protein_coding protein_coding MGP_CBAJ_T0038036.1 MGP_CBAJ_G0020736.1 mouse_genomes_project 14 14332964 14335211 - MGP_CBAJ_P0038036 Mrps16 protein_coding protein_coding MGP_CBAJ_T0039198.1 MGP_CBAJ_G0021064.1 mouse_genomes_project 14 53676344 53688340 + MGP_CBAJ_P0039198 Rnf31 protein_coding protein_coding MGP_CBAJ_T0039199.1 MGP_CBAJ_G0021064.1 mouse_genomes_project 14 53676380 53682303 + MGP_CBAJ_P0039199 Rnf31 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039200.1 MGP_CBAJ_G0021064.1 mouse_genomes_project 14 53676911 53688311 + MGP_CBAJ_P0039200 Rnf31 protein_coding protein_coding MGP_CBAJ_T0039201.1 MGP_CBAJ_G0021064.1 mouse_genomes_project 14 53677103 53677595 + Rnf31 protein_coding retained_intron MGP_CBAJ_T0039202.1 MGP_CBAJ_G0021064.1 mouse_genomes_project 14 53683031 53683597 + Rnf31 protein_coding retained_intron MGP_CBAJ_T0101638.1 MGP_CBAJ_G0039669.1 mouse_genomes_project 14 47598057 47598340 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0038650.1 MGP_CBAJ_G0020906.1 mouse_genomes_project 14 41939623 41960009 + MGP_CBAJ_P0038650 Psmc6 protein_coding protein_coding MGP_CBAJ_T0039089.1 MGP_CBAJ_G0021039.1 mouse_genomes_project 14 52904740 52909426 + MGP_CBAJ_P0039089 Pabpn1 protein_coding protein_coding MGP_CBAJ_T0039090.1 MGP_CBAJ_G0021039.1 mouse_genomes_project 14 52906390 52910414 + MGP_CBAJ_P0039090 Pabpn1 protein_coding protein_coding MGP_CBAJ_T0039091.1 MGP_CBAJ_G0021039.1 mouse_genomes_project 14 52906397 52910341 + MGP_CBAJ_P0039091 Pabpn1 protein_coding protein_coding MGP_CBAJ_T0039092.1 MGP_CBAJ_G0021039.1 mouse_genomes_project 14 52906398 52911174 + MGP_CBAJ_P0039092 Pabpn1 protein_coding protein_coding MGP_CBAJ_T0039093.1 MGP_CBAJ_G0021039.1 mouse_genomes_project 14 52906398 52910301 + MGP_CBAJ_P0039093 Pabpn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0039094.1 MGP_CBAJ_G0021039.1 mouse_genomes_project 14 52906860 52910379 + MGP_CBAJ_P0039094 Pabpn1 protein_coding protein_coding MGP_CBAJ_T0039095.1 MGP_CBAJ_G0021039.1 mouse_genomes_project 14 52907075 52908134 + MGP_CBAJ_P0039095 Pabpn1 protein_coding protein_coding MGP_CBAJ_T0017148.1 MGP_CBAJ_G0015015.1 mouse_genomes_project 14 66865532 66876559 - 1700120O09Rik processed_transcript processed_transcript MGP_CBAJ_T0101635.1 MGP_CBAJ_G0039666.1 mouse_genomes_project 14 20340701 20350093 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0097957.1 MGP_CBAJ_G0036230.1 mouse_genomes_project 14 115452040 115452151 + n-R5s50 rRNA rRNA MGP_CBAJ_T0039870.1 MGP_CBAJ_G0021323.1 mouse_genomes_project 14 101446134 101884927 - MGP_CBAJ_P0039870 Dach1 protein_coding protein_coding MGP_CBAJ_T0039871.1 MGP_CBAJ_G0021323.1 mouse_genomes_project 14 101446136 101884927 - MGP_CBAJ_P0039871 Dach1 protein_coding protein_coding MGP_CBAJ_T0039872.1 MGP_CBAJ_G0021323.1 mouse_genomes_project 14 101493919 101888063 - Dach1 protein_coding retained_intron MGP_CBAJ_T0038434.1 MGP_CBAJ_G0020833.1 mouse_genomes_project 14 26661560 26719586 - MGP_CBAJ_P0038434 Colq protein_coding protein_coding MGP_CBAJ_T0038435.1 MGP_CBAJ_G0020833.1 mouse_genomes_project 14 26661565 26719483 - MGP_CBAJ_P0038435 Colq protein_coding unknown_likely_coding MGP_CBAJ_T0038436.1 MGP_CBAJ_G0020833.1 mouse_genomes_project 14 26661638 26696494 - MGP_CBAJ_P0038436 Colq protein_coding protein_coding MGP_CBAJ_T0038438.1 MGP_CBAJ_G0020833.1 mouse_genomes_project 14 26691269 26736817 - MGP_CBAJ_P0038438 Colq protein_coding protein_coding MGP_CBAJ_T0038439.1 MGP_CBAJ_G0020833.1 mouse_genomes_project 14 26720595 26736793 - Colq protein_coding processed_transcript MGP_CBAJ_T0038440.1 MGP_CBAJ_G0020833.1 mouse_genomes_project 14 26732246 26736782 - Colq protein_coding processed_transcript MGP_CBAJ_T0003457.1 MGP_CBAJ_G0003145.1 mouse_genomes_project 14 20320793 20334311 - Anxa11os antisense antisense MGP_CBAJ_T0002558.1 MGP_CBAJ_G0002456.1 mouse_genomes_project 14 50258553 50258998 + MGP_CBAJ_P0002558 Trav6-1 TR_V_gene TR_V_gene MGP_CBAJ_T0039974.1 MGP_CBAJ_G0021362.1 mouse_genomes_project 14 125193906 125455500 - MGP_CBAJ_P0039974 Abcc4 protein_coding protein_coding MGP_CBAJ_T0039975.1 MGP_CBAJ_G0021362.1 mouse_genomes_project 14 125193906 125455500 - MGP_CBAJ_P0039975 Abcc4 protein_coding protein_coding MGP_CBAJ_T0035722.1 MGP_CBAJ_G0019879.1 mouse_genomes_project 12 123616980 123677404 + MGP_CBAJ_P0035722 Pacs2 protein_coding protein_coding MGP_CBAJ_T0000097.1 MGP_CBAJ_G0000074.1 mouse_genomes_project 12 125395018 125395312 - MGP_CBAJ_P0000097 Ighv1-5 IG_V_gene IG_V_gene MGP_CBAJ_T0000098.1 MGP_CBAJ_G0000074.1 mouse_genomes_project 12 125395018 125395496 - MGP_CBAJ_P0000098 Ighv1-5 IG_V_gene IG_V_gene MGP_CBAJ_T0098772.1 MGP_CBAJ_G0037027.1 mouse_genomes_project 12 83061379 83061539 + Gm25926 snRNA snRNA MGP_CBAJ_T0097931.1 MGP_CBAJ_G0036204.1 mouse_genomes_project 12 92408402 92408521 - n-R5s64 rRNA rRNA MGP_CBAJ_T0012695.1 MGP_CBAJ_G0010807.1 mouse_genomes_project 12 126887912 126888976 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0035472.1 MGP_CBAJ_G0019797.1 mouse_genomes_project 12 114659270 114712716 + MGP_CBAJ_P0035472 Tcl1b3 protein_coding protein_coding MGP_CBAJ_T0034876.1 MGP_CBAJ_G0019614.1 mouse_genomes_project 12 87453869 87610175 - MGP_CBAJ_P0034876 Cox16 protein_coding protein_coding MGP_CBAJ_T0034877.1 MGP_CBAJ_G0019614.1 mouse_genomes_project 12 87454011 87610138 - MGP_CBAJ_P0034877 Cox16 protein_coding protein_coding MGP_CBAJ_T0034881.1 MGP_CBAJ_G0019614.1 mouse_genomes_project 12 87593568 87610185 - MGP_CBAJ_P0034881 Cox16 protein_coding protein_coding MGP_CBAJ_T0034882.1 MGP_CBAJ_G0019614.1 mouse_genomes_project 12 87594953 87609894 - Cox16 protein_coding processed_transcript MGP_CBAJ_T0034883.1 MGP_CBAJ_G0019614.1 mouse_genomes_project 12 87594953 87610178 - MGP_CBAJ_P0034883 Cox16 protein_coding protein_coding MGP_CBAJ_T0034884.1 MGP_CBAJ_G0019614.1 mouse_genomes_project 12 87594955 87609916 - Cox16 protein_coding processed_transcript MGP_CBAJ_T0034885.1 MGP_CBAJ_G0019614.1 mouse_genomes_project 12 87597094 87610192 - Cox16 protein_coding processed_transcript MGP_CBAJ_T0034886.1 MGP_CBAJ_G0019614.1 mouse_genomes_project 12 87597115 87610179 - MGP_CBAJ_P0034886 Cox16 protein_coding protein_coding MGP_CBAJ_T0034890.1 MGP_CBAJ_G0019614.1 mouse_genomes_project 12 87605046 87610150 - Cox16 protein_coding retained_intron MGP_CBAJ_T0034041.1 MGP_CBAJ_G0019306.1 mouse_genomes_project 12 6449959 6535281 + MGP_CBAJ_P0034041 Pum2 protein_coding protein_coding MGP_CBAJ_T0034042.1 MGP_CBAJ_G0019306.1 mouse_genomes_project 12 6449959 6534154 + MGP_CBAJ_P0034042 Pum2 protein_coding protein_coding MGP_CBAJ_T0034043.1 MGP_CBAJ_G0019306.1 mouse_genomes_project 12 6449970 6533020 + MGP_CBAJ_P0034043 Pum2 protein_coding protein_coding MGP_CBAJ_T0034044.1 MGP_CBAJ_G0019306.1 mouse_genomes_project 12 6450049 6535261 + MGP_CBAJ_P0034044 Pum2 protein_coding protein_coding MGP_CBAJ_T0034045.1 MGP_CBAJ_G0019306.1 mouse_genomes_project 12 6450084 6486620 + Pum2 protein_coding processed_transcript MGP_CBAJ_T0034046.1 MGP_CBAJ_G0019306.1 mouse_genomes_project 12 6450100 6535257 + MGP_CBAJ_P0034046 Pum2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034047.1 MGP_CBAJ_G0019306.1 mouse_genomes_project 12 6450138 6535254 + MGP_CBAJ_P0034047 Pum2 protein_coding unknown_likely_coding MGP_CBAJ_T0034048.1 MGP_CBAJ_G0019306.1 mouse_genomes_project 12 6450246 6532701 + MGP_CBAJ_P0034048 Pum2 protein_coding protein_coding MGP_CBAJ_T0034049.1 MGP_CBAJ_G0019306.1 mouse_genomes_project 12 6450295 6532728 + MGP_CBAJ_P0034049 Pum2 protein_coding protein_coding MGP_CBAJ_T0034050.1 MGP_CBAJ_G0019306.1 mouse_genomes_project 12 6450506 6535281 + MGP_CBAJ_P0034050 Pum2 protein_coding protein_coding MGP_CBAJ_T0034051.1 MGP_CBAJ_G0019306.1 mouse_genomes_project 12 6450561 6492882 + MGP_CBAJ_P0034051 Pum2 protein_coding protein_coding MGP_CBAJ_T0034052.1 MGP_CBAJ_G0019306.1 mouse_genomes_project 12 6450590 6492651 + MGP_CBAJ_P0034052 Pum2 protein_coding protein_coding MGP_CBAJ_T0034053.1 MGP_CBAJ_G0019306.1 mouse_genomes_project 12 6453359 6488742 + MGP_CBAJ_P0034053 Pum2 protein_coding protein_coding MGP_CBAJ_T0034054.1 MGP_CBAJ_G0019306.1 mouse_genomes_project 12 6473441 6493165 + MGP_CBAJ_P0034054 Pum2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034055.1 MGP_CBAJ_G0019306.1 mouse_genomes_project 12 6489477 6504517 + MGP_CBAJ_P0034055 Pum2 protein_coding protein_coding MGP_CBAJ_T0034056.1 MGP_CBAJ_G0019306.1 mouse_genomes_project 12 6511866 6530936 + MGP_CBAJ_P0034056 Pum2 protein_coding protein_coding MGP_CBAJ_T0034057.1 MGP_CBAJ_G0019306.1 mouse_genomes_project 12 6526195 6527113 + Pum2 protein_coding retained_intron MGP_CBAJ_T0035583.1 MGP_CBAJ_G0019829.1 mouse_genomes_project 12 121008543 121015219 - MGP_CBAJ_P0035583 Hsp90aa1 protein_coding protein_coding MGP_CBAJ_T0035584.1 MGP_CBAJ_G0019829.1 mouse_genomes_project 12 121012589 121013222 - Hsp90aa1 protein_coding retained_intron MGP_CBAJ_T0035585.1 MGP_CBAJ_G0019829.1 mouse_genomes_project 12 121013104 121014602 - Hsp90aa1 protein_coding retained_intron MGP_CBAJ_T0035586.1 MGP_CBAJ_G0019829.1 mouse_genomes_project 12 121013558 121021654 - MGP_CBAJ_P0035586 Hsp90aa1 protein_coding protein_coding MGP_CBAJ_T0035587.1 MGP_CBAJ_G0019829.1 mouse_genomes_project 12 121014199 121015188 - MGP_CBAJ_P0035587 Hsp90aa1 protein_coding protein_coding MGP_CBAJ_T0035588.1 MGP_CBAJ_G0019829.1 mouse_genomes_project 12 121014215 121014881 - MGP_CBAJ_P0035588 Hsp90aa1 protein_coding protein_coding MGP_CBAJ_T0035466.1 MGP_CBAJ_G0019791.1 mouse_genomes_project 12 114229071 114240802 + MGP_CBAJ_P0035466 4930408O17Rik protein_coding protein_coding MGP_CBAJ_T0034428.1 MGP_CBAJ_G0019447.1 mouse_genomes_project 12 54719280 54802367 + MGP_CBAJ_P0034428 Arhgap5 protein_coding unknown_likely_coding MGP_CBAJ_T0000126.1 MGP_CBAJ_G0000095.1 mouse_genomes_project 12 127471347 127471825 - MGP_CBAJ_P0000126 IG_V_gene IG_V_gene MGP_CBAJ_T0034821.1 MGP_CBAJ_G0019593.1 mouse_genomes_project 12 84951793 84979921 + MGP_CBAJ_P0034821 Arg2 protein_coding protein_coding MGP_CBAJ_T0012666.1 MGP_CBAJ_G0010778.1 mouse_genomes_project 12 90016921 90017309 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0034417.1 MGP_CBAJ_G0019442.1 mouse_genomes_project 12 53905467 54008470 - MGP_CBAJ_P0034417 Hectd1 protein_coding protein_coding MGP_CBAJ_T0034418.1 MGP_CBAJ_G0019442.1 mouse_genomes_project 12 53905467 54008470 - MGP_CBAJ_P0034418 Hectd1 protein_coding protein_coding MGP_CBAJ_T0035768.1 MGP_CBAJ_G0019893.1 mouse_genomes_project 12 128009048 128326517 + Ptprn2 protein_coding processed_transcript MGP_CBAJ_T0035769.1 MGP_CBAJ_G0019893.1 mouse_genomes_project 12 128009057 128677957 + Ptprn2 protein_coding processed_transcript MGP_CBAJ_T0035770.1 MGP_CBAJ_G0019893.1 mouse_genomes_project 12 128009057 128837732 + MGP_CBAJ_P0035770 Ptprn2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035771.1 MGP_CBAJ_G0019893.1 mouse_genomes_project 12 128009098 128399116 + Ptprn2 protein_coding retained_intron MGP_CBAJ_T0035772.1 MGP_CBAJ_G0019893.1 mouse_genomes_project 12 128009161 128837676 + MGP_CBAJ_P0035772 Ptprn2 protein_coding protein_coding MGP_CBAJ_T0000837.1 MGP_CBAJ_G0000773.1 mouse_genomes_project 12 123257936 123260515 - TEC TEC MGP_CBAJ_T0006408.1 MGP_CBAJ_G0005317.1 mouse_genomes_project 12 121185377 121188318 - Gm26912 lincRNA lincRNA MGP_CBAJ_T0000245.1 MGP_CBAJ_G0000190.1 mouse_genomes_project 12 125998812 125999246 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0033939.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 626496 869170 + MGP_CBAJ_P0033939 Dtnb protein_coding protein_coding MGP_CBAJ_T0033940.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 626506 868776 + MGP_CBAJ_P0033940 Dtnb protein_coding protein_coding MGP_CBAJ_T0033941.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 626532 868737 + MGP_CBAJ_P0033941 Dtnb protein_coding nonsense_mediated_decay MGP_CBAJ_T0033942.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 626556 868776 + MGP_CBAJ_P0033942 Dtnb protein_coding nonsense_mediated_decay MGP_CBAJ_T0033943.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 626557 713237 + MGP_CBAJ_P0033943 Dtnb protein_coding protein_coding MGP_CBAJ_T0033944.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 626558 801277 + Dtnb protein_coding retained_intron MGP_CBAJ_T0033945.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 626576 868773 + MGP_CBAJ_P0033945 Dtnb protein_coding protein_coding MGP_CBAJ_T0033946.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 626586 868520 + MGP_CBAJ_P0033946 Dtnb protein_coding nonsense_mediated_decay MGP_CBAJ_T0033947.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 626588 868771 + MGP_CBAJ_P0033947 Dtnb protein_coding nonsense_mediated_decay MGP_CBAJ_T0033948.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 626589 730946 + Dtnb protein_coding processed_transcript MGP_CBAJ_T0033949.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 626593 868773 + MGP_CBAJ_P0033949 Dtnb protein_coding protein_coding MGP_CBAJ_T0033950.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 626598 868773 + MGP_CBAJ_P0033950 Dtnb protein_coding protein_coding MGP_CBAJ_T0033951.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 626646 868883 + MGP_CBAJ_P0033951 Dtnb protein_coding nonsense_mediated_decay MGP_CBAJ_T0033952.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 626659 657484 + MGP_CBAJ_P0033952 Dtnb protein_coding protein_coding MGP_CBAJ_T0033953.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 626743 834175 + MGP_CBAJ_P0033953 Dtnb protein_coding nonsense_mediated_decay MGP_CBAJ_T0033954.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 627107 868769 + MGP_CBAJ_P0033954 Dtnb protein_coding protein_coding MGP_CBAJ_T0033955.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 646717 868773 + MGP_CBAJ_P0033955 Dtnb protein_coding protein_coding MGP_CBAJ_T0033956.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 691537 868773 + MGP_CBAJ_P0033956 Dtnb protein_coding protein_coding MGP_CBAJ_T0033957.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 759678 799156 + Dtnb protein_coding retained_intron MGP_CBAJ_T0033958.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 799727 831745 + Dtnb protein_coding processed_transcript MGP_CBAJ_T0033959.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 831558 868520 + Dtnb protein_coding retained_intron MGP_CBAJ_T0033960.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 831813 868776 + MGP_CBAJ_P0033960 Dtnb protein_coding protein_coding MGP_CBAJ_T0033961.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 861718 868776 + Dtnb protein_coding processed_transcript MGP_CBAJ_T0033962.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 861928 868775 + Dtnb protein_coding retained_intron MGP_CBAJ_T0033963.1 MGP_CBAJ_G0019277.1 mouse_genomes_project 12 866952 868776 + Dtnb protein_coding retained_intron MGP_CBAJ_T0034423.1 MGP_CBAJ_G0019445.1 mouse_genomes_project 12 54226965 54232216 - MGP_CBAJ_P0034423 Gpr33 protein_coding protein_coding MGP_CBAJ_T0006313.1 MGP_CBAJ_G0005255.1 mouse_genomes_project 12 30211983 30216497 - Gm28806 lincRNA lincRNA MGP_CBAJ_T0035602.1 MGP_CBAJ_G0019833.1 mouse_genomes_project 12 121223253 121242831 - MGP_CBAJ_P0035602 Cinp protein_coding protein_coding MGP_CBAJ_T0009739.1 MGP_CBAJ_G0007877.1 mouse_genomes_project 12 119902756 119902853 + Mir329 miRNA miRNA MGP_CBAJ_T0034557.1 MGP_CBAJ_G0019497.1 mouse_genomes_project 12 70575184 71474216 - MGP_CBAJ_P0034557 Mdga2 protein_coding protein_coding MGP_CBAJ_T0034558.1 MGP_CBAJ_G0019497.1 mouse_genomes_project 12 70576252 70576675 - MGP_CBAJ_P0034558 Mdga2 protein_coding protein_coding MGP_CBAJ_T0034559.1 MGP_CBAJ_G0019497.1 mouse_genomes_project 12 70576798 71472900 - MGP_CBAJ_P0034559 Mdga2 protein_coding protein_coding MGP_CBAJ_T0034560.1 MGP_CBAJ_G0019497.1 mouse_genomes_project 12 70577085 71472881 - MGP_CBAJ_P0034560 Mdga2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034561.1 MGP_CBAJ_G0019497.1 mouse_genomes_project 12 70588269 70593430 - Mdga2 protein_coding retained_intron MGP_CBAJ_T0034562.1 MGP_CBAJ_G0019497.1 mouse_genomes_project 12 70760795 70773832 - Mdga2 protein_coding processed_transcript MGP_CBAJ_T0034563.1 MGP_CBAJ_G0019497.1 mouse_genomes_project 12 70843041 71001592 - Mdga2 protein_coding processed_transcript MGP_CBAJ_T0034564.1 MGP_CBAJ_G0019497.1 mouse_genomes_project 12 71445123 71474209 - Mdga2 protein_coding processed_transcript MGP_CBAJ_T0034565.1 MGP_CBAJ_G0019497.1 mouse_genomes_project 12 71461268 71474048 - Mdga2 protein_coding processed_transcript MGP_CBAJ_T0000224.1 MGP_CBAJ_G0000169.1 mouse_genomes_project 12 124703643 124704063 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0006320.1 MGP_CBAJ_G0005261.1 mouse_genomes_project 12 51264496 51284743 + 3110039M20Rik lincRNA lincRNA MGP_CBAJ_T0006321.1 MGP_CBAJ_G0005261.1 mouse_genomes_project 12 51265503 51284521 + 3110039M20Rik lincRNA lincRNA MGP_CBAJ_T0000012.1 MGP_CBAJ_G0000009.1 mouse_genomes_project 12 124072051 124081698 - MGP_CBAJ_P0000012 Ighd IG_C_gene IG_C_gene MGP_CBAJ_T0000013.1 MGP_CBAJ_G0000009.1 mouse_genomes_project 12 124075005 124081698 - MGP_CBAJ_P0000013 Ighd IG_C_gene IG_C_gene MGP_CBAJ_T0035750.1 MGP_CBAJ_G0000009.1 mouse_genomes_project 12 124072978 124081678 - MGP_CBAJ_P0035750 Ighd IG_C_gene unknown_likely_coding MGP_CBAJ_T0035751.1 MGP_CBAJ_G0000009.1 mouse_genomes_project 12 124072978 124081537 - MGP_CBAJ_P0035751 Ighd IG_C_gene unknown_likely_coding MGP_CBAJ_T0035379.1 MGP_CBAJ_G0019757.1 mouse_genomes_project 12 111685697 111786109 - MGP_CBAJ_P0035379 Btbd7 protein_coding protein_coding MGP_CBAJ_T0098745.1 MGP_CBAJ_G0037000.1 mouse_genomes_project 12 12955069 12955176 + Gm25414 snRNA snRNA MGP_CBAJ_T0034467.1 MGP_CBAJ_G0019468.1 mouse_genomes_project 12 59322070 59325201 - MGP_CBAJ_P0034467 Nkx2-1 protein_coding protein_coding MGP_CBAJ_T0034468.1 MGP_CBAJ_G0019468.1 mouse_genomes_project 12 59322070 59329115 - MGP_CBAJ_P0034468 Nkx2-1 protein_coding protein_coding MGP_CBAJ_T0017044.1 MGP_CBAJ_G0014969.1 mouse_genomes_project 12 46795147 46799665 + Gm9921 processed_transcript processed_transcript MGP_CBAJ_T0006356.1 MGP_CBAJ_G0005290.1 mouse_genomes_project 12 108042755 108044677 - 1700064M15Rik lincRNA lincRNA MGP_CBAJ_T0034125.1 MGP_CBAJ_G0019336.1 mouse_genomes_project 12 16004333 16019601 + Pdia6 protein_coding retained_intron MGP_CBAJ_T0034126.1 MGP_CBAJ_G0019336.1 mouse_genomes_project 12 16004333 16022584 + MGP_CBAJ_P0034126 Pdia6 protein_coding protein_coding MGP_CBAJ_T0034127.1 MGP_CBAJ_G0019336.1 mouse_genomes_project 12 16004396 16012016 + Pdia6 protein_coding processed_transcript MGP_CBAJ_T0034128.1 MGP_CBAJ_G0019336.1 mouse_genomes_project 12 16011645 16015439 + Pdia6 protein_coding retained_intron MGP_CBAJ_T0034129.1 MGP_CBAJ_G0019336.1 mouse_genomes_project 12 16015029 16016728 + Pdia6 protein_coding processed_transcript MGP_CBAJ_T0034001.1 MGP_CBAJ_G0019285.1 mouse_genomes_project 12 1399846 1406848 + MGP_CBAJ_P0034001 Ptrhd1 protein_coding protein_coding MGP_CBAJ_T0006298.1 MGP_CBAJ_G0005243.1 mouse_genomes_project 12 4983449 4991745 - 1700101O22Rik lincRNA lincRNA MGP_CBAJ_T0012645.1 MGP_CBAJ_G0010757.1 mouse_genomes_project 12 59143767 59143998 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000119.1 MGP_CBAJ_G0000089.1 mouse_genomes_project 12 126712986 126713469 - MGP_CBAJ_P0000119 IG_V_gene IG_V_gene MGP_CBAJ_T0012635.1 MGP_CBAJ_G0010747.1 mouse_genomes_project 12 14313733 14314732 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0035672.1 MGP_CBAJ_G0019857.1 mouse_genomes_project 12 122470890 122473095 - MGP_CBAJ_P0035672 Rd3l protein_coding protein_coding MGP_CBAJ_T0035673.1 MGP_CBAJ_G0019857.1 mouse_genomes_project 12 122470891 122471924 - MGP_CBAJ_P0035673 Rd3l protein_coding protein_coding MGP_CBAJ_T0035674.1 MGP_CBAJ_G0019857.1 mouse_genomes_project 12 122470924 122472833 - MGP_CBAJ_P0035674 Rd3l protein_coding protein_coding MGP_CBAJ_T0035675.1 MGP_CBAJ_G0019857.1 mouse_genomes_project 12 122470968 122472251 - MGP_CBAJ_P0035675 Rd3l protein_coding protein_coding MGP_CBAJ_T0035676.1 MGP_CBAJ_G0019857.1 mouse_genomes_project 12 122470970 122472880 - MGP_CBAJ_P0035676 Rd3l protein_coding protein_coding MGP_CBAJ_T0000250.1 MGP_CBAJ_G0000195.1 mouse_genomes_project 12 126712986 126713443 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0035453.1 MGP_CBAJ_G0019782.1 mouse_genomes_project 12 113444082 113464711 + MGP_CBAJ_P0035453 protein_coding protein_coding MGP_CBAJ_T0035454.1 MGP_CBAJ_G0019782.1 mouse_genomes_project 12 113444873 113460602 + protein_coding retained_intron MGP_CBAJ_T0034460.1 MGP_CBAJ_G0019462.1 mouse_genomes_project 12 58155122 58158358 - MGP_CBAJ_P0034460 Nfkbia protein_coding protein_coding MGP_CBAJ_T0100005.1 MGP_CBAJ_G0038260.1 mouse_genomes_project 12 83847008 83847129 + Gm24994 snoRNA snoRNA MGP_CBAJ_T0035366.1 MGP_CBAJ_G0019749.1 mouse_genomes_project 12 111424493 111437517 + MGP_CBAJ_P0035366 Chga protein_coding protein_coding MGP_CBAJ_T0034533.1 MGP_CBAJ_G0019485.1 mouse_genomes_project 12 65015421 65126427 + Lrfn5 protein_coding processed_transcript MGP_CBAJ_T0034534.1 MGP_CBAJ_G0019485.1 mouse_genomes_project 12 65015438 65195736 + Lrfn5 protein_coding processed_transcript MGP_CBAJ_T0034535.1 MGP_CBAJ_G0019485.1 mouse_genomes_project 12 65016186 65390099 + MGP_CBAJ_P0034535 Lrfn5 protein_coding protein_coding MGP_CBAJ_T0034536.1 MGP_CBAJ_G0019485.1 mouse_genomes_project 12 65016186 65375312 + MGP_CBAJ_P0034536 Lrfn5 protein_coding protein_coding MGP_CBAJ_T0034537.1 MGP_CBAJ_G0019485.1 mouse_genomes_project 12 65388438 65390513 + Lrfn5 protein_coding retained_intron MGP_CBAJ_T0034259.1 MGP_CBAJ_G0019384.1 mouse_genomes_project 12 31517265 31531848 - MGP_CBAJ_P0034259 Dus4l protein_coding protein_coding MGP_CBAJ_T0000067.1 MGP_CBAJ_G0000052.1 mouse_genomes_project 12 124821971 124822435 - MGP_CBAJ_P0000067 IG_V_gene IG_V_gene MGP_CBAJ_T0035061.1 MGP_CBAJ_G0019663.1 mouse_genomes_project 12 91585815 91600885 + MGP_CBAJ_P0035061 Fcf1 protein_coding protein_coding MGP_CBAJ_T0035062.1 MGP_CBAJ_G0019663.1 mouse_genomes_project 12 91585899 91600873 + MGP_CBAJ_P0035062 Fcf1 protein_coding protein_coding MGP_CBAJ_T0035063.1 MGP_CBAJ_G0019663.1 mouse_genomes_project 12 91595118 91600879 + Fcf1 protein_coding retained_intron MGP_CBAJ_T0034839.1 MGP_CBAJ_G0019600.1 mouse_genomes_project 12 86112049 86122801 - MGP_CBAJ_P0034839 Actn1 protein_coding unknown_likely_coding MGP_CBAJ_T0034840.1 MGP_CBAJ_G0019600.1 mouse_genomes_project 12 86112051 86216049 - MGP_CBAJ_P0034840 Actn1 protein_coding protein_coding MGP_CBAJ_T0034841.1 MGP_CBAJ_G0019600.1 mouse_genomes_project 12 86112831 86215769 - MGP_CBAJ_P0034841 Actn1 protein_coding protein_coding MGP_CBAJ_T0034811.1 MGP_CBAJ_G0019586.1 mouse_genomes_project 12 84621106 84644810 - MGP_CBAJ_P0034811 Atp6v1d protein_coding protein_coding MGP_CBAJ_T0006380.1 MGP_CBAJ_G0005309.1 mouse_genomes_project 12 118339470 118364697 - lincRNA lincRNA MGP_CBAJ_T0034439.1 MGP_CBAJ_G0019454.1 mouse_genomes_project 12 57377509 57381565 - MGP_CBAJ_P0034439 Cfl2 protein_coding protein_coding MGP_CBAJ_T0034124.1 MGP_CBAJ_G0019335.1 mouse_genomes_project 12 15891481 15896279 - MGP_CBAJ_P0034124 Kcnf1 protein_coding protein_coding MGP_CBAJ_T0034777.1 MGP_CBAJ_G0019574.1 mouse_genomes_project 12 82057675 82112009 + MGP_CBAJ_P0034777 Plekhg3 protein_coding protein_coding MGP_CBAJ_T0034778.1 MGP_CBAJ_G0019574.1 mouse_genomes_project 12 82077737 82111378 + MGP_CBAJ_P0034778 Plekhg3 protein_coding unknown_likely_coding MGP_CBAJ_T0035717.1 MGP_CBAJ_G0019876.1 mouse_genomes_project 12 123548192 123592928 - MGP_CBAJ_P0035717 Brf1 protein_coding protein_coding MGP_CBAJ_T0035718.1 MGP_CBAJ_G0019876.1 mouse_genomes_project 12 123548651 123564661 - MGP_CBAJ_P0035718 Brf1 protein_coding unknown_likely_coding MGP_CBAJ_T0009787.1 MGP_CBAJ_G0007925.1 mouse_genomes_project 12 128809353 128809422 + Mir153 miRNA miRNA MGP_CBAJ_T0006379.1 MGP_CBAJ_G0005308.1 mouse_genomes_project 12 117679161 117725098 - Gm15208 lincRNA lincRNA MGP_CBAJ_T0034160.1 MGP_CBAJ_G0019346.1 mouse_genomes_project 12 20402140 20430165 - MGP_CBAJ_P0034160 Ywhaq protein_coding protein_coding MGP_CBAJ_T0034161.1 MGP_CBAJ_G0019346.1 mouse_genomes_project 12 20408790 20411245 - Ywhaq protein_coding retained_intron MGP_CBAJ_T0000832.1 MGP_CBAJ_G0000768.1 mouse_genomes_project 12 96492514 96498320 - TEC TEC MGP_CBAJ_T0034218.1 MGP_CBAJ_G0019370.1 mouse_genomes_project 12 29898310 30099669 - MGP_CBAJ_P0034218 Sntg2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034219.1 MGP_CBAJ_G0019370.1 mouse_genomes_project 12 29898311 30099716 - MGP_CBAJ_P0034219 Sntg2 protein_coding protein_coding MGP_CBAJ_T0034220.1 MGP_CBAJ_G0019370.1 mouse_genomes_project 12 29898818 30099606 - MGP_CBAJ_P0034220 Sntg2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034221.1 MGP_CBAJ_G0019370.1 mouse_genomes_project 12 29898823 30099669 - MGP_CBAJ_P0034221 Sntg2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034222.1 MGP_CBAJ_G0019370.1 mouse_genomes_project 12 29915976 29922271 - Sntg2 protein_coding retained_intron MGP_CBAJ_T0034223.1 MGP_CBAJ_G0019370.1 mouse_genomes_project 12 29991786 30084405 - Sntg2 protein_coding processed_transcript MGP_CBAJ_T0034224.1 MGP_CBAJ_G0019370.1 mouse_genomes_project 12 30034679 30099684 - Sntg2 protein_coding processed_transcript MGP_CBAJ_T0035376.1 MGP_CBAJ_G0019755.1 mouse_genomes_project 12 111651777 111658851 - MGP_CBAJ_P0035376 AK010878 protein_coding protein_coding MGP_CBAJ_T0035377.1 MGP_CBAJ_G0019755.1 mouse_genomes_project 12 111657331 111658854 - MGP_CBAJ_P0035377 AK010878 protein_coding protein_coding MGP_CBAJ_T0006361.1 MGP_CBAJ_G0005295.1 mouse_genomes_project 12 114302430 114303142 - Gm28875 lincRNA lincRNA MGP_CBAJ_T0035101.1 MGP_CBAJ_G0019678.1 mouse_genomes_project 12 92453861 92538220 + MGP_CBAJ_P0035101 Mfsd7c protein_coding protein_coding MGP_CBAJ_T0034462.1 MGP_CBAJ_G0019464.1 mouse_genomes_project 12 58281977 58285079 + MGP_CBAJ_P0034462 Insm2 protein_coding protein_coding MGP_CBAJ_T0035755.1 MGP_CBAJ_G0019888.1 mouse_genomes_project 12 127528374 127541431 + MGP_CBAJ_P0035755 Zfp386 protein_coding protein_coding MGP_CBAJ_T0035756.1 MGP_CBAJ_G0019888.1 mouse_genomes_project 12 127528414 127535726 + Zfp386 protein_coding retained_intron MGP_CBAJ_T0035757.1 MGP_CBAJ_G0019888.1 mouse_genomes_project 12 127528426 127544200 + MGP_CBAJ_P0035757 Zfp386 protein_coding protein_coding MGP_CBAJ_T0035758.1 MGP_CBAJ_G0019888.1 mouse_genomes_project 12 127528479 127532278 + Zfp386 protein_coding retained_intron MGP_CBAJ_T0009741.1 MGP_CBAJ_G0007879.1 mouse_genomes_project 12 119904851 119904925 + Mir679 miRNA miRNA MGP_CBAJ_T0000822.1 MGP_CBAJ_G0000758.1 mouse_genomes_project 12 48768871 48769337 + TEC TEC MGP_CBAJ_T0035211.1 MGP_CBAJ_G0019710.1 mouse_genomes_project 12 95895501 96506135 + Nrxn3 protein_coding retained_intron MGP_CBAJ_T0035212.1 MGP_CBAJ_G0019710.1 mouse_genomes_project 12 95895513 96042554 + Nrxn3 protein_coding retained_intron MGP_CBAJ_T0035213.1 MGP_CBAJ_G0019710.1 mouse_genomes_project 12 95895611 97701643 + MGP_CBAJ_P0035213 Nrxn3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035214.1 MGP_CBAJ_G0019710.1 mouse_genomes_project 12 95895734 97701662 + MGP_CBAJ_P0035214 Nrxn3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035215.1 MGP_CBAJ_G0019710.1 mouse_genomes_project 12 95897658 95971343 + Nrxn3 protein_coding processed_transcript MGP_CBAJ_T0035216.1 MGP_CBAJ_G0019710.1 mouse_genomes_project 12 95898330 95971209 + Nrxn3 protein_coding processed_transcript MGP_CBAJ_T0035217.1 MGP_CBAJ_G0019710.1 mouse_genomes_project 12 95970068 96044828 + MGP_CBAJ_P0035217 Nrxn3 protein_coding unknown_likely_coding MGP_CBAJ_T0035218.1 MGP_CBAJ_G0019710.1 mouse_genomes_project 12 95970731 97703700 + MGP_CBAJ_P0035218 Nrxn3 protein_coding protein_coding MGP_CBAJ_T0035219.1 MGP_CBAJ_G0019710.1 mouse_genomes_project 12 95971666 96044951 + Nrxn3 protein_coding processed_transcript MGP_CBAJ_T0035220.1 MGP_CBAJ_G0019710.1 mouse_genomes_project 12 96167239 96418966 + Nrxn3 protein_coding processed_transcript MGP_CBAJ_T0035221.1 MGP_CBAJ_G0019710.1 mouse_genomes_project 12 96167248 97701825 + MGP_CBAJ_P0035221 Nrxn3 protein_coding protein_coding MGP_CBAJ_T0035222.1 MGP_CBAJ_G0019710.1 mouse_genomes_project 12 96424753 97701175 + MGP_CBAJ_P0035222 Nrxn3 protein_coding protein_coding MGP_CBAJ_T0035223.1 MGP_CBAJ_G0019710.1 mouse_genomes_project 12 97111811 97701664 + MGP_CBAJ_P0035223 Nrxn3 protein_coding protein_coding MGP_CBAJ_T0035224.1 MGP_CBAJ_G0019710.1 mouse_genomes_project 12 97111811 97702208 + MGP_CBAJ_P0035224 Nrxn3 protein_coding protein_coding MGP_CBAJ_T0009747.1 MGP_CBAJ_G0007885.1 mouse_genomes_project 12 119911977 119912063 + Mir376c miRNA miRNA MGP_CBAJ_T0000830.1 MGP_CBAJ_G0000766.1 mouse_genomes_project 12 91726331 91727901 - TEC TEC MGP_CBAJ_T0034433.1 MGP_CBAJ_G0019451.1 mouse_genomes_project 12 57113209 57124407 - MGP_CBAJ_P0034433 Sptssa protein_coding protein_coding MGP_CBAJ_T0098771.1 MGP_CBAJ_G0037026.1 mouse_genomes_project 12 83042532 83042631 + Gm24775 snRNA snRNA MGP_CBAJ_T0098773.1 MGP_CBAJ_G0037028.1 mouse_genomes_project 12 84524677 84524779 - Gm25225 snRNA snRNA MGP_CBAJ_T0034555.1 MGP_CBAJ_G0019495.1 mouse_genomes_project 12 69180253 69182747 + MGP_CBAJ_P0034555 Wdr20rt protein_coding protein_coding MGP_CBAJ_T0034244.1 MGP_CBAJ_G0019380.1 mouse_genomes_project 12 31252643 31253537 + MGP_CBAJ_P0034244 Trim13 protein_coding protein_coding MGP_CBAJ_T0012667.1 MGP_CBAJ_G0010779.1 mouse_genomes_project 12 90759909 90760551 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0035331.1 MGP_CBAJ_G0019738.1 mouse_genomes_project 12 109618270 109672875 - MGP_CBAJ_P0035331 Smek1 protein_coding protein_coding MGP_CBAJ_T0035332.1 MGP_CBAJ_G0019738.1 mouse_genomes_project 12 109618270 109672875 - MGP_CBAJ_P0035332 Smek1 protein_coding protein_coding MGP_CBAJ_T0012660.1 MGP_CBAJ_G0010772.1 mouse_genomes_project 12 84987022 84987450 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098746.1 MGP_CBAJ_G0037001.1 mouse_genomes_project 12 13362261 13362365 + Gm26449 snRNA snRNA MGP_CBAJ_T0034718.1 MGP_CBAJ_G0019551.1 mouse_genomes_project 12 78642124 78645406 - MGP_CBAJ_P0034718 Tmem30b protein_coding protein_coding MGP_CBAJ_T0011203.1 MGP_CBAJ_G0009341.1 mouse_genomes_project 12 74552834 74553144 + Gm22058 misc_RNA misc_RNA MGP_CBAJ_T0012634.1 MGP_CBAJ_G0010746.1 mouse_genomes_project 12 12128454 12129291 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0034078.1 MGP_CBAJ_G0019315.1 mouse_genomes_project 12 9163574 9221531 - MGP_CBAJ_P0034078 Kcns3 protein_coding protein_coding MGP_CBAJ_T0034079.1 MGP_CBAJ_G0019315.1 mouse_genomes_project 12 9163574 9221062 - MGP_CBAJ_P0034079 Kcns3 protein_coding protein_coding MGP_CBAJ_T0034465.1 MGP_CBAJ_G0019466.1 mouse_genomes_project 12 58548876 58582314 + MGP_CBAJ_P0034465 Brms1l protein_coding protein_coding MGP_CBAJ_T0034463.1 MGP_CBAJ_G0019465.1 mouse_genomes_project 12 58285989 58530838 - MGP_CBAJ_P0034463 Ralgapa1 protein_coding protein_coding MGP_CBAJ_T0034464.1 MGP_CBAJ_G0019465.1 mouse_genomes_project 12 58295963 58530438 - MGP_CBAJ_P0034464 Ralgapa1 protein_coding unknown_likely_coding MGP_CBAJ_T0034163.1 MGP_CBAJ_G0019348.1 mouse_genomes_project 12 23662648 23713130 + MGP_CBAJ_P0034163 Grhl1 protein_coding protein_coding MGP_CBAJ_T0034164.1 MGP_CBAJ_G0019348.1 mouse_genomes_project 12 23671022 23713134 + MGP_CBAJ_P0034164 Grhl1 protein_coding protein_coding MGP_CBAJ_T0100024.1 MGP_CBAJ_G0038279.1 mouse_genomes_project 12 119842677 119842749 + Gm23508 snoRNA snoRNA MGP_CBAJ_T0006328.1 MGP_CBAJ_G0005266.1 mouse_genomes_project 12 74435201 74443132 + 4931403G20Rik lincRNA lincRNA MGP_CBAJ_T0034556.1 MGP_CBAJ_G0019496.1 mouse_genomes_project 12 70360434 70361460 - MGP_CBAJ_P0034556 Rpl10l protein_coding protein_coding MGP_CBAJ_T0017078.1 MGP_CBAJ_G0014982.1 mouse_genomes_project 12 127586952 127625694 - Gm20658 processed_transcript processed_transcript MGP_CBAJ_T0017079.1 MGP_CBAJ_G0014982.1 mouse_genomes_project 12 127586975 127625809 - Gm20658 processed_transcript processed_transcript MGP_CBAJ_T0033932.1 MGP_CBAJ_G0019276.1 mouse_genomes_project 12 443545 536993 + MGP_CBAJ_P0033932 Asxl2 protein_coding protein_coding MGP_CBAJ_T0033933.1 MGP_CBAJ_G0019276.1 mouse_genomes_project 12 443545 536998 + MGP_CBAJ_P0033933 Asxl2 protein_coding protein_coding MGP_CBAJ_T0033934.1 MGP_CBAJ_G0019276.1 mouse_genomes_project 12 443572 523579 + MGP_CBAJ_P0033934 Asxl2 protein_coding protein_coding MGP_CBAJ_T0033935.1 MGP_CBAJ_G0019276.1 mouse_genomes_project 12 443589 532606 + MGP_CBAJ_P0033935 Asxl2 protein_coding protein_coding MGP_CBAJ_T0033936.1 MGP_CBAJ_G0019276.1 mouse_genomes_project 12 443600 476106 + Asxl2 protein_coding retained_intron MGP_CBAJ_T0033937.1 MGP_CBAJ_G0019276.1 mouse_genomes_project 12 460892 523704 + MGP_CBAJ_P0033937 Asxl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0033938.1 MGP_CBAJ_G0019276.1 mouse_genomes_project 12 521042 534895 + Asxl2 protein_coding processed_transcript MGP_CBAJ_T0035612.1 MGP_CBAJ_G0019836.1 mouse_genomes_project 12 121414666 121504066 + MGP_CBAJ_P0035612 Rcor1 protein_coding protein_coding MGP_CBAJ_T0003329.1 MGP_CBAJ_G0003059.1 mouse_genomes_project 12 75735352 75761619 - 3110056K07Rik antisense antisense MGP_CBAJ_T0003330.1 MGP_CBAJ_G0003059.1 mouse_genomes_project 12 75755819 75761855 - 3110056K07Rik antisense antisense MGP_CBAJ_T0034672.1 MGP_CBAJ_G0019537.1 mouse_genomes_project 12 77072781 77096691 - Rtn1 protein_coding processed_transcript MGP_CBAJ_T0034673.1 MGP_CBAJ_G0019537.1 mouse_genomes_project 12 77072781 77293561 - MGP_CBAJ_P0034673 Rtn1 protein_coding protein_coding MGP_CBAJ_T0034674.1 MGP_CBAJ_G0019537.1 mouse_genomes_project 12 77072782 77097676 - MGP_CBAJ_P0034674 Rtn1 protein_coding protein_coding MGP_CBAJ_T0034675.1 MGP_CBAJ_G0019537.1 mouse_genomes_project 12 77073318 77097676 - MGP_CBAJ_P0034675 Rtn1 protein_coding protein_coding MGP_CBAJ_T0034676.1 MGP_CBAJ_G0019537.1 mouse_genomes_project 12 77084262 77097638 - Rtn1 protein_coding processed_transcript MGP_CBAJ_T0009777.1 MGP_CBAJ_G0007915.1 mouse_genomes_project 12 122604624 122604684 - Mir3073b miRNA miRNA MGP_CBAJ_T0034080.1 MGP_CBAJ_G0019316.1 mouse_genomes_project 12 9303369 9303936 - MGP_CBAJ_P0034080 Msgn1 protein_coding protein_coding MGP_CBAJ_T0000062.1 MGP_CBAJ_G0000048.1 mouse_genomes_project 12 124706509 124706955 - MGP_CBAJ_P0000062 Ighv2-9 IG_V_gene IG_V_gene MGP_CBAJ_T0034843.1 MGP_CBAJ_G0019602.1 mouse_genomes_project 12 86446332 86487795 + MGP_CBAJ_P0034843 Exd2 protein_coding protein_coding MGP_CBAJ_T0035479.1 MGP_CBAJ_G0019799.1 mouse_genomes_project 12 115018872 115068143 + MGP_CBAJ_P0035479 D430019H16Rik protein_coding protein_coding MGP_CBAJ_T0035444.1 MGP_CBAJ_G0019777.1 mouse_genomes_project 12 113257607 113266724 + MGP_CBAJ_P0035444 Serpina3a protein_coding protein_coding MGP_CBAJ_T0035445.1 MGP_CBAJ_G0019777.1 mouse_genomes_project 12 113257662 113266637 + MGP_CBAJ_P0035445 Serpina3a protein_coding protein_coding MGP_CBAJ_T0035446.1 MGP_CBAJ_G0019777.1 mouse_genomes_project 12 113260921 113266347 + MGP_CBAJ_P0035446 Serpina3a protein_coding protein_coding MGP_CBAJ_T0011205.1 MGP_CBAJ_G0009343.1 mouse_genomes_project 12 76523716 76524018 + Gm22959 misc_RNA misc_RNA MGP_CBAJ_T0035333.1 MGP_CBAJ_G0019739.1 mouse_genomes_project 12 110079891 110377932 + MGP_CBAJ_P0035333 Catsperb protein_coding protein_coding MGP_CBAJ_T0035540.1 MGP_CBAJ_G0019817.1 mouse_genomes_project 12 118924456 118954387 + MGP_CBAJ_P0035540 Yy1 protein_coding protein_coding MGP_CBAJ_T0035541.1 MGP_CBAJ_G0019817.1 mouse_genomes_project 12 118944139 118953318 + Yy1 protein_coding retained_intron MGP_CBAJ_T0034589.1 MGP_CBAJ_G0019511.1 mouse_genomes_project 12 74126956 74130314 - Sos2 protein_coding retained_intron MGP_CBAJ_T0034590.1 MGP_CBAJ_G0019511.1 mouse_genomes_project 12 74126960 74244709 - MGP_CBAJ_P0034590 Sos2 protein_coding protein_coding MGP_CBAJ_T0034591.1 MGP_CBAJ_G0019511.1 mouse_genomes_project 12 74128049 74244698 - MGP_CBAJ_P0034591 Sos2 protein_coding protein_coding MGP_CBAJ_T0034592.1 MGP_CBAJ_G0019511.1 mouse_genomes_project 12 74128285 74244484 - MGP_CBAJ_P0034592 Sos2 protein_coding protein_coding MGP_CBAJ_T0034593.1 MGP_CBAJ_G0019511.1 mouse_genomes_project 12 74128571 74134195 - Sos2 protein_coding retained_intron MGP_CBAJ_T0034594.1 MGP_CBAJ_G0019511.1 mouse_genomes_project 12 74139759 74142129 - Sos2 protein_coding retained_intron MGP_CBAJ_T0034595.1 MGP_CBAJ_G0019511.1 mouse_genomes_project 12 74164520 74167193 - Sos2 protein_coding retained_intron MGP_CBAJ_T0003327.1 MGP_CBAJ_G0003058.1 mouse_genomes_project 12 74377579 74381794 + 4930512B01Rik antisense antisense MGP_CBAJ_T0003328.1 MGP_CBAJ_G0003058.1 mouse_genomes_project 12 74377626 74428090 + 4930512B01Rik antisense antisense MGP_CBAJ_T0035208.1 MGP_CBAJ_G0019708.1 mouse_genomes_project 12 95384874 95385631 - MGP_CBAJ_P0035208 protein_coding protein_coding MGP_CBAJ_T0000241.1 MGP_CBAJ_G0000186.1 mouse_genomes_project 12 125551340 125551772 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0035391.1 MGP_CBAJ_G0019760.1 mouse_genomes_project 12 112146575 112152562 - Prima1 protein_coding processed_transcript MGP_CBAJ_T0035392.1 MGP_CBAJ_G0019760.1 mouse_genomes_project 12 112146575 112191858 - MGP_CBAJ_P0035392 Prima1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035393.1 MGP_CBAJ_G0019760.1 mouse_genomes_project 12 112146575 112191862 - MGP_CBAJ_P0035393 Prima1 protein_coding protein_coding MGP_CBAJ_T0035394.1 MGP_CBAJ_G0019760.1 mouse_genomes_project 12 112146935 112191840 - MGP_CBAJ_P0035394 Prima1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035395.1 MGP_CBAJ_G0019760.1 mouse_genomes_project 12 112185299 112185736 - Prima1 protein_coding processed_transcript MGP_CBAJ_T0035524.1 MGP_CBAJ_G0019811.1 mouse_genomes_project 12 118196864 118293246 - MGP_CBAJ_P0035524 Ccdc85c protein_coding protein_coding MGP_CBAJ_T0009755.1 MGP_CBAJ_G0007893.1 mouse_genomes_project 12 119917397 119917512 - Gm44322 miRNA miRNA MGP_CBAJ_T0034900.1 MGP_CBAJ_G0019620.1 mouse_genomes_project 12 87772014 87812019 + MGP_CBAJ_P0034900 Ttc9 protein_coding protein_coding MGP_CBAJ_T0100014.1 MGP_CBAJ_G0038269.1 mouse_genomes_project 12 113728419 113728547 - Gm24334 snoRNA snoRNA MGP_CBAJ_T0035239.1 MGP_CBAJ_G0019713.1 mouse_genomes_project 12 98834317 98960272 + MGP_CBAJ_P0035239 Tshr protein_coding protein_coding MGP_CBAJ_T0035240.1 MGP_CBAJ_G0019713.1 mouse_genomes_project 12 98834323 98942304 + MGP_CBAJ_P0035240 Tshr protein_coding protein_coding MGP_CBAJ_T0035241.1 MGP_CBAJ_G0019713.1 mouse_genomes_project 12 98957828 98959319 + MGP_CBAJ_P0035241 Tshr protein_coding protein_coding MGP_CBAJ_T0098740.1 MGP_CBAJ_G0036995.1 mouse_genomes_project 12 2306586 2306689 - Gm23167 snRNA snRNA MGP_CBAJ_T0000123.1 MGP_CBAJ_G0000092.1 mouse_genomes_project 12 127427701 127427994 - MGP_CBAJ_P0000123 Ighv1-82 IG_V_gene IG_V_gene MGP_CBAJ_T0035637.1 MGP_CBAJ_G0019846.1 mouse_genomes_project 12 121977516 122068594 + MGP_CBAJ_P0035637 Mark3 protein_coding protein_coding MGP_CBAJ_T0035638.1 MGP_CBAJ_G0019846.1 mouse_genomes_project 12 121977516 122068594 + MGP_CBAJ_P0035638 Mark3 protein_coding protein_coding MGP_CBAJ_T0011215.1 MGP_CBAJ_G0009353.1 mouse_genomes_project 12 119791240 119791338 + Gm27350 misc_RNA misc_RNA MGP_CBAJ_T0034151.1 MGP_CBAJ_G0019344.1 mouse_genomes_project 12 20307889 20315101 + MGP_CBAJ_P0034151 Iah1 protein_coding protein_coding MGP_CBAJ_T0100001.1 MGP_CBAJ_G0038256.1 mouse_genomes_project 12 69535829 69535961 + Gm22782 snoRNA snoRNA MGP_CBAJ_T0012689.1 MGP_CBAJ_G0010801.1 mouse_genomes_project 12 123786418 123787238 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012687.1 MGP_CBAJ_G0010799.1 mouse_genomes_project 12 117536958 117537800 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0034983.1 MGP_CBAJ_G0019641.1 mouse_genomes_project 12 90580910 90594233 + MGP_CBAJ_P0034983 Acot6 protein_coding protein_coding MGP_CBAJ_T0009735.1 MGP_CBAJ_G0007873.1 mouse_genomes_project 12 119901078 119901139 + Mir380 miRNA miRNA MGP_CBAJ_T0035467.1 MGP_CBAJ_G0019792.1 mouse_genomes_project 12 114309156 114354857 - MGP_CBAJ_P0035467 Syne3 protein_coding protein_coding MGP_CBAJ_T0012661.1 MGP_CBAJ_G0010773.1 mouse_genomes_project 12 84992100 84992448 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0034280.1 MGP_CBAJ_G0019390.1 mouse_genomes_project 12 32334189 32338425 + MGP_CBAJ_P0034280 Ccdc71l protein_coding protein_coding MGP_CBAJ_T0035622.1 MGP_CBAJ_G0019842.1 mouse_genomes_project 12 121803289 121817048 + MGP_CBAJ_P0035622 Exoc3l4 protein_coding protein_coding MGP_CBAJ_T0034897.1 MGP_CBAJ_G0019619.1 mouse_genomes_project 12 87701701 87728030 - MGP_CBAJ_P0034897 Med6 protein_coding protein_coding MGP_CBAJ_T0034898.1 MGP_CBAJ_G0019619.1 mouse_genomes_project 12 87701838 87702889 - Med6 protein_coding retained_intron MGP_CBAJ_T0034899.1 MGP_CBAJ_G0019619.1 mouse_genomes_project 12 87711695 87728077 - Med6 protein_coding retained_intron MGP_CBAJ_T0101585.1 MGP_CBAJ_G0039616.1 mouse_genomes_project 12 124035275 124036481 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0097762.1 MGP_CBAJ_G0036035.1 mouse_genomes_project 12 58530281 58531251 + pseudogene pseudogene MGP_CBAJ_T0012649.1 MGP_CBAJ_G0010761.1 mouse_genomes_project 12 62453602 62454577 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000024.1 MGP_CBAJ_G0000018.1 mouse_genomes_project 12 124113416 124113428 - Ighd5-6 IG_D_gene processed_transcript MGP_CBAJ_T0000025.1 MGP_CBAJ_G0000018.1 mouse_genomes_project 12 124113416 124113426 - MGP_CBAJ_P0000025 Ighd5-6 IG_D_gene IG_D_gene MGP_CBAJ_T0003352.1 MGP_CBAJ_G0003079.1 mouse_genomes_project 12 120974595 120975108 - Gm17111 antisense antisense MGP_CBAJ_T0034661.1 MGP_CBAJ_G0019534.1 mouse_genomes_project 12 76906996 76923980 - MGP_CBAJ_P0034661 L3hypdh protein_coding protein_coding MGP_CBAJ_T0034662.1 MGP_CBAJ_G0019534.1 mouse_genomes_project 12 76910064 76923980 - L3hypdh protein_coding retained_intron MGP_CBAJ_T0034663.1 MGP_CBAJ_G0019534.1 mouse_genomes_project 12 76910832 76923559 - L3hypdh protein_coding processed_transcript MGP_CBAJ_T0035749.1 MGP_CBAJ_G0019885.1 mouse_genomes_project 12 123806988 123810574 + MGP_CBAJ_P0035749 Tmem121 protein_coding protein_coding MGP_CBAJ_T0035129.1 MGP_CBAJ_G0019683.1 mouse_genomes_project 12 93011778 93068116 + MGP_CBAJ_P0035129 Gpatch2l protein_coding protein_coding MGP_CBAJ_T0100038.1 MGP_CBAJ_G0038293.1 mouse_genomes_project 12 119878974 119879042 + Gm25224 snoRNA snoRNA MGP_CBAJ_T0101267.1 MGP_CBAJ_G0039396.1 mouse_genomes_project 12 113380910 113411394 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0035032.1 MGP_CBAJ_G0019651.1 mouse_genomes_project 12 90960438 90961821 + MGP_CBAJ_P0035032 Rnf113a2 protein_coding protein_coding MGP_CBAJ_T0035364.1 MGP_CBAJ_G0019748.1 mouse_genomes_project 12 111323205 111352812 + MGP_CBAJ_P0035364 Golga5 protein_coding protein_coding MGP_CBAJ_T0035365.1 MGP_CBAJ_G0019748.1 mouse_genomes_project 12 111323981 111352812 + MGP_CBAJ_P0035365 Golga5 protein_coding protein_coding MGP_CBAJ_T0017047.1 MGP_CBAJ_G0014972.1 mouse_genomes_project 12 87659958 87661282 - Gm17191 processed_transcript processed_transcript MGP_CBAJ_T0098778.1 MGP_CBAJ_G0037033.1 mouse_genomes_project 12 101375857 101376018 + Gm23249 snRNA snRNA MGP_CBAJ_T0034509.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62254579 62326327 + MGP_CBAJ_P0034509 Ctage5 protein_coding protein_coding MGP_CBAJ_T0034510.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62254605 62326324 + MGP_CBAJ_P0034510 Ctage5 protein_coding protein_coding MGP_CBAJ_T0034511.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62254622 62326327 + MGP_CBAJ_P0034511 Ctage5 protein_coding protein_coding MGP_CBAJ_T0034512.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62254624 62278897 + MGP_CBAJ_P0034512 Ctage5 protein_coding protein_coding MGP_CBAJ_T0034513.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62254644 62326373 + MGP_CBAJ_P0034513 Ctage5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034514.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62254669 62300392 + MGP_CBAJ_P0034514 Ctage5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034515.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62255236 62326101 + MGP_CBAJ_P0034515 Ctage5 protein_coding protein_coding MGP_CBAJ_T0034516.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62255696 62326373 + MGP_CBAJ_P0034516 Ctage5 protein_coding protein_coding MGP_CBAJ_T0034517.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62255881 62276233 + MGP_CBAJ_P0034517 Ctage5 protein_coding protein_coding MGP_CBAJ_T0034518.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62256145 62331659 + MGP_CBAJ_P0034518 Ctage5 protein_coding protein_coding MGP_CBAJ_T0034519.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62256312 62326324 + MGP_CBAJ_P0034519 Ctage5 protein_coding protein_coding MGP_CBAJ_T0034520.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62256326 62326103 + MGP_CBAJ_P0034520 Ctage5 protein_coding protein_coding MGP_CBAJ_T0034521.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62256340 62274336 + Ctage5 protein_coding retained_intron MGP_CBAJ_T0034522.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62256361 62326373 + MGP_CBAJ_P0034522 Ctage5 protein_coding protein_coding MGP_CBAJ_T0034523.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62260957 62326103 + MGP_CBAJ_P0034523 Ctage5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034524.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62278869 62326103 + MGP_CBAJ_P0034524 Ctage5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034525.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62294335 62315741 + MGP_CBAJ_P0034525 Ctage5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034526.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62298235 62306950 + Ctage5 protein_coding retained_intron MGP_CBAJ_T0034527.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62300305 62325791 + Ctage5 protein_coding retained_intron MGP_CBAJ_T0034528.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62300434 62302500 + Ctage5 protein_coding retained_intron MGP_CBAJ_T0034529.1 MGP_CBAJ_G0019483.1 mouse_genomes_project 12 62310961 62324670 + Ctage5 protein_coding retained_intron MGP_CBAJ_T0098752.1 MGP_CBAJ_G0037007.1 mouse_genomes_project 12 54849936 54850043 - Gm23296 snRNA snRNA MGP_CBAJ_T0000074.1 MGP_CBAJ_G0000058.1 mouse_genomes_project 12 124985844 124986274 - MGP_CBAJ_P0000074 Ighv14-4 IG_V_gene IG_V_gene MGP_CBAJ_T0000075.1 MGP_CBAJ_G0000058.1 mouse_genomes_project 12 124985850 124986269 - MGP_CBAJ_P0000075 Ighv14-4 IG_V_gene IG_V_gene MGP_CBAJ_T0009670.1 MGP_CBAJ_G0007808.1 mouse_genomes_project 12 37249706 37249780 + Mir5099 miRNA miRNA MGP_CBAJ_T0035705.1 MGP_CBAJ_G0019868.1 mouse_genomes_project 12 123290755 123315247 + MGP_CBAJ_P0035705 Cep170b protein_coding protein_coding MGP_CBAJ_T0035706.1 MGP_CBAJ_G0019868.1 mouse_genomes_project 12 123290775 123315241 + MGP_CBAJ_P0035706 Cep170b protein_coding protein_coding MGP_CBAJ_T0035707.1 MGP_CBAJ_G0019868.1 mouse_genomes_project 12 123290775 123315241 + MGP_CBAJ_P0035707 Cep170b protein_coding protein_coding MGP_CBAJ_T0034038.1 MGP_CBAJ_G0019304.1 mouse_genomes_project 12 6247899 6250122 - MGP_CBAJ_P0034038 Rhob protein_coding protein_coding MGP_CBAJ_T0012677.1 MGP_CBAJ_G0010789.1 mouse_genomes_project 12 110401602 110401945 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0034611.1 MGP_CBAJ_G0019517.1 mouse_genomes_project 12 74587537 74594494 + MGP_CBAJ_P0034611 Gm3086 protein_coding protein_coding MGP_CBAJ_T0035462.1 MGP_CBAJ_G0019788.1 mouse_genomes_project 12 113790875 113793866 + MGP_CBAJ_P0035462 Gm1000 protein_coding protein_coding MGP_CBAJ_T0035715.1 MGP_CBAJ_G0019874.1 mouse_genomes_project 12 123497883 123518159 - MGP_CBAJ_P0035715 Jag2 protein_coding protein_coding MGP_CBAJ_T0006330.1 MGP_CBAJ_G0005268.1 mouse_genomes_project 12 76163684 76164731 - 1700083H02Rik lincRNA lincRNA MGP_CBAJ_T0034659.1 MGP_CBAJ_G0019532.1 mouse_genomes_project 12 76651428 76817297 + MGP_CBAJ_P0034659 Daam1 protein_coding protein_coding MGP_CBAJ_T0100020.1 MGP_CBAJ_G0038275.1 mouse_genomes_project 12 119831008 119831079 + Gm23600 snoRNA snoRNA MGP_CBAJ_T0034140.1 MGP_CBAJ_G0019340.1 mouse_genomes_project 12 16633129 16639855 + MGP_CBAJ_P0034140 Hpcal1 protein_coding protein_coding MGP_CBAJ_T0012682.1 MGP_CBAJ_G0010794.1 mouse_genomes_project 12 116218945 116219291 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0034725.1 MGP_CBAJ_G0019554.1 mouse_genomes_project 12 79132488 79155291 + MGP_CBAJ_P0034725 Snapc1 protein_coding protein_coding MGP_CBAJ_T0009752.1 MGP_CBAJ_G0007890.1 mouse_genomes_project 12 119913602 119913681 + Mir300 miRNA miRNA MGP_CBAJ_T0101576.1 MGP_CBAJ_G0039607.1 mouse_genomes_project 12 112712657 112717735 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0034342.1 MGP_CBAJ_G0019418.1 mouse_genomes_project 12 39493655 39583985 + MGP_CBAJ_P0034342 Etv1 protein_coding protein_coding MGP_CBAJ_T0034343.1 MGP_CBAJ_G0019418.1 mouse_genomes_project 12 39494357 39585951 + MGP_CBAJ_P0034343 Etv1 protein_coding protein_coding MGP_CBAJ_T0034344.1 MGP_CBAJ_G0019418.1 mouse_genomes_project 12 39494559 39583515 + MGP_CBAJ_P0034344 Etv1 protein_coding protein_coding MGP_CBAJ_T0034345.1 MGP_CBAJ_G0019418.1 mouse_genomes_project 12 39494594 39496093 + MGP_CBAJ_P0034345 Etv1 protein_coding protein_coding MGP_CBAJ_T0034346.1 MGP_CBAJ_G0019418.1 mouse_genomes_project 12 39494624 39552160 + MGP_CBAJ_P0034346 Etv1 protein_coding protein_coding MGP_CBAJ_T0034347.1 MGP_CBAJ_G0019418.1 mouse_genomes_project 12 39495124 39583512 + MGP_CBAJ_P0034347 Etv1 protein_coding protein_coding MGP_CBAJ_T0034348.1 MGP_CBAJ_G0019418.1 mouse_genomes_project 12 39495389 39585035 + Etv1 protein_coding retained_intron MGP_CBAJ_T0034349.1 MGP_CBAJ_G0019418.1 mouse_genomes_project 12 39495405 39552072 + MGP_CBAJ_P0034349 Etv1 protein_coding protein_coding MGP_CBAJ_T0034350.1 MGP_CBAJ_G0019418.1 mouse_genomes_project 12 39497749 39583912 + MGP_CBAJ_P0034350 Etv1 protein_coding protein_coding MGP_CBAJ_T0034351.1 MGP_CBAJ_G0019418.1 mouse_genomes_project 12 39497760 39583697 + MGP_CBAJ_P0034351 Etv1 protein_coding protein_coding MGP_CBAJ_T0034352.1 MGP_CBAJ_G0019418.1 mouse_genomes_project 12 39497788 39585939 + MGP_CBAJ_P0034352 Etv1 protein_coding protein_coding MGP_CBAJ_T0034353.1 MGP_CBAJ_G0019418.1 mouse_genomes_project 12 39541557 39548118 + MGP_CBAJ_P0034353 Etv1 protein_coding protein_coding MGP_CBAJ_T0034354.1 MGP_CBAJ_G0019418.1 mouse_genomes_project 12 39554299 39583452 + Etv1 protein_coding processed_transcript MGP_CBAJ_T0034488.1 MGP_CBAJ_G0019474.1 mouse_genomes_project 12 60483327 60488828 - MGP_CBAJ_P0034488 Foxa1 protein_coding protein_coding MGP_CBAJ_T0003323.1 MGP_CBAJ_G0003054.1 mouse_genomes_project 12 59486920 59489975 - Gm15524 antisense antisense MGP_CBAJ_T0034477.1 MGP_CBAJ_G0019472.1 mouse_genomes_project 12 60116318 60125789 + MGP_CBAJ_P0034477 Prps1l3 protein_coding protein_coding MGP_CBAJ_T0098739.1 MGP_CBAJ_G0036994.1 mouse_genomes_project 12 2015363 2015468 + Gm23676 snRNA snRNA MGP_CBAJ_T0000124.1 MGP_CBAJ_G0000093.1 mouse_genomes_project 12 127427701 127428133 - MGP_CBAJ_P0000124 IG_V_gene IG_V_gene MGP_CBAJ_T0017058.1 MGP_CBAJ_G0014980.1 mouse_genomes_project 12 119791298 119794826 + Rian processed_transcript lincRNA MGP_CBAJ_T0017059.1 MGP_CBAJ_G0014980.1 mouse_genomes_project 12 119791303 119832661 + Rian processed_transcript lincRNA MGP_CBAJ_T0017060.1 MGP_CBAJ_G0014980.1 mouse_genomes_project 12 119791386 119814501 + Rian processed_transcript lincRNA MGP_CBAJ_T0017061.1 MGP_CBAJ_G0014980.1 mouse_genomes_project 12 119807715 119821512 + Rian processed_transcript lincRNA MGP_CBAJ_T0017062.1 MGP_CBAJ_G0014980.1 mouse_genomes_project 12 119807715 119833606 + Rian processed_transcript lincRNA MGP_CBAJ_T0017063.1 MGP_CBAJ_G0014980.1 mouse_genomes_project 12 119812518 119832727 + Rian processed_transcript lincRNA MGP_CBAJ_T0017064.1 MGP_CBAJ_G0014980.1 mouse_genomes_project 12 119820076 119823553 + Rian processed_transcript lincRNA MGP_CBAJ_T0017065.1 MGP_CBAJ_G0014980.1 mouse_genomes_project 12 119821238 119830725 + Rian processed_transcript lincRNA MGP_CBAJ_T0017066.1 MGP_CBAJ_G0014980.1 mouse_genomes_project 12 119821482 119833529 + Rian processed_transcript lincRNA MGP_CBAJ_T0017067.1 MGP_CBAJ_G0014980.1 mouse_genomes_project 12 119831202 119832708 + Rian processed_transcript TEC MGP_CBAJ_T0017068.1 MGP_CBAJ_G0014980.1 mouse_genomes_project 12 119833406 119851329 + Rian processed_transcript lincRNA MGP_CBAJ_T0017069.1 MGP_CBAJ_G0014980.1 mouse_genomes_project 12 119833427 119844655 + Rian processed_transcript lincRNA MGP_CBAJ_T0017070.1 MGP_CBAJ_G0014980.1 mouse_genomes_project 12 119836268 119849422 + Rian processed_transcript lincRNA MGP_CBAJ_T0017071.1 MGP_CBAJ_G0014980.1 mouse_genomes_project 12 119838797 119839995 + Rian processed_transcript lincRNA MGP_CBAJ_T0017072.1 MGP_CBAJ_G0014980.1 mouse_genomes_project 12 119839712 119845515 + Rian processed_transcript lincRNA MGP_CBAJ_T0017073.1 MGP_CBAJ_G0014980.1 mouse_genomes_project 12 119840324 119850636 + Rian processed_transcript lincRNA MGP_CBAJ_T0017074.1 MGP_CBAJ_G0014980.1 mouse_genomes_project 12 119840328 119845536 + Rian processed_transcript lincRNA MGP_CBAJ_T0017075.1 MGP_CBAJ_G0014980.1 mouse_genomes_project 12 119840658 119849368 + Rian processed_transcript lincRNA MGP_CBAJ_T0017076.1 MGP_CBAJ_G0014980.1 mouse_genomes_project 12 119846933 119848745 + Rian processed_transcript TEC MGP_CBAJ_T0098763.1 MGP_CBAJ_G0037018.1 mouse_genomes_project 12 67355436 67355543 + Gm24921 snRNA snRNA MGP_CBAJ_T0035568.1 MGP_CBAJ_G0019824.1 mouse_genomes_project 12 119776792 119787701 - MGP_CBAJ_P0035568 Rtl1 protein_coding protein_coding MGP_CBAJ_T0034901.1 MGP_CBAJ_G0019621.1 mouse_genomes_project 12 87866763 87942370 - MGP_CBAJ_P0034901 Map3k9 protein_coding protein_coding MGP_CBAJ_T0034902.1 MGP_CBAJ_G0019621.1 mouse_genomes_project 12 87875769 87942074 - MGP_CBAJ_P0034902 Map3k9 protein_coding unknown_likely_coding MGP_CBAJ_T0035127.1 MGP_CBAJ_G0019682.1 mouse_genomes_project 12 92823326 92918271 + MGP_CBAJ_P0035127 Ift43 protein_coding unknown_likely_coding MGP_CBAJ_T0035128.1 MGP_CBAJ_G0019682.1 mouse_genomes_project 12 92823334 92918264 + MGP_CBAJ_P0035128 Ift43 protein_coding protein_coding MGP_CBAJ_T0006411.1 MGP_CBAJ_G0005319.1 mouse_genomes_project 12 121812735 121816812 - Gm10425 lincRNA lincRNA MGP_CBAJ_T0003312.1 MGP_CBAJ_G0003045.1 mouse_genomes_project 12 952127 955082 - Dnmt3aos antisense antisense MGP_CBAJ_T0009742.1 MGP_CBAJ_G0007880.1 mouse_genomes_project 12 119904945 119905066 + Mir1193 miRNA miRNA MGP_CBAJ_T0006301.1 MGP_CBAJ_G0005246.1 mouse_genomes_project 12 7461767 7467226 - 1700022H16Rik lincRNA lincRNA MGP_CBAJ_T0101574.1 MGP_CBAJ_G0039606.1 mouse_genomes_project 12 81020935 81028396 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0101575.1 MGP_CBAJ_G0039606.1 mouse_genomes_project 12 81021600 81028419 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0000087.1 MGP_CBAJ_G0000065.1 mouse_genomes_project 12 125150334 125150809 - MGP_CBAJ_P0000087 Ighv3-8 IG_V_gene IG_V_gene MGP_CBAJ_T0034938.1 MGP_CBAJ_G0019629.1 mouse_genomes_project 12 90021323 90077419 + MGP_CBAJ_P0034938 Rbm25 protein_coding protein_coding MGP_CBAJ_T0034939.1 MGP_CBAJ_G0019629.1 mouse_genomes_project 12 90026424 90049220 + MGP_CBAJ_P0034939 Rbm25 protein_coding protein_coding MGP_CBAJ_T0034940.1 MGP_CBAJ_G0019629.1 mouse_genomes_project 12 90027337 90086124 + MGP_CBAJ_P0034940 Rbm25 protein_coding protein_coding MGP_CBAJ_T0034941.1 MGP_CBAJ_G0019629.1 mouse_genomes_project 12 90027338 90054158 + MGP_CBAJ_P0034941 Rbm25 protein_coding protein_coding MGP_CBAJ_T0034942.1 MGP_CBAJ_G0019629.1 mouse_genomes_project 12 90027342 90049218 + MGP_CBAJ_P0034942 Rbm25 protein_coding protein_coding MGP_CBAJ_T0034943.1 MGP_CBAJ_G0019629.1 mouse_genomes_project 12 90027376 90062466 + MGP_CBAJ_P0034943 Rbm25 protein_coding protein_coding MGP_CBAJ_T0034944.1 MGP_CBAJ_G0019629.1 mouse_genomes_project 12 90027391 90045686 + MGP_CBAJ_P0034944 Rbm25 protein_coding protein_coding MGP_CBAJ_T0034945.1 MGP_CBAJ_G0019629.1 mouse_genomes_project 12 90027411 90067001 + MGP_CBAJ_P0034945 Rbm25 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034946.1 MGP_CBAJ_G0019629.1 mouse_genomes_project 12 90037656 90042264 + Rbm25 protein_coding retained_intron MGP_CBAJ_T0034947.1 MGP_CBAJ_G0019629.1 mouse_genomes_project 12 90045541 90054177 + Rbm25 protein_coding retained_intron MGP_CBAJ_T0034948.1 MGP_CBAJ_G0019629.1 mouse_genomes_project 12 90045626 90085021 + MGP_CBAJ_P0034948 Rbm25 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034949.1 MGP_CBAJ_G0019629.1 mouse_genomes_project 12 90045686 90071485 + Rbm25 protein_coding retained_intron MGP_CBAJ_T0034950.1 MGP_CBAJ_G0019629.1 mouse_genomes_project 12 90049169 90054537 + Rbm25 protein_coding processed_transcript MGP_CBAJ_T0034951.1 MGP_CBAJ_G0019629.1 mouse_genomes_project 12 90051088 90054894 + Rbm25 protein_coding retained_intron MGP_CBAJ_T0034952.1 MGP_CBAJ_G0019629.1 mouse_genomes_project 12 90061526 90062586 + Rbm25 protein_coding retained_intron MGP_CBAJ_T0034953.1 MGP_CBAJ_G0019629.1 mouse_genomes_project 12 90065977 90067001 + Rbm25 protein_coding processed_transcript MGP_CBAJ_T0034954.1 MGP_CBAJ_G0019629.1 mouse_genomes_project 12 90077526 90079113 + Rbm25 protein_coding processed_transcript MGP_CBAJ_T0034955.1 MGP_CBAJ_G0019629.1 mouse_genomes_project 12 90077854 90080900 + Rbm25 protein_coding retained_intron MGP_CBAJ_T0000255.1 MGP_CBAJ_G0000200.1 mouse_genomes_project 12 127445833 127458447 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0035201.1 MGP_CBAJ_G0019704.1 mouse_genomes_project 12 94363623 94390257 - MGP_CBAJ_P0035201 Snw1 protein_coding protein_coding MGP_CBAJ_T0012643.1 MGP_CBAJ_G0010755.1 mouse_genomes_project 12 57179488 57179866 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0034612.1 MGP_CBAJ_G0019518.1 mouse_genomes_project 12 74589076 74611689 - MGP_CBAJ_P0034612 Sav1 protein_coding protein_coding MGP_CBAJ_T0034031.1 MGP_CBAJ_G0019300.1 mouse_genomes_project 12 5645223 5689572 + MGP_CBAJ_P0034031 Apob protein_coding protein_coding MGP_CBAJ_T0034032.1 MGP_CBAJ_G0019300.1 mouse_genomes_project 12 5645223 5660812 + MGP_CBAJ_P0034032 Apob protein_coding protein_coding MGP_CBAJ_T0034033.1 MGP_CBAJ_G0019300.1 mouse_genomes_project 12 5645354 5689237 + MGP_CBAJ_P0034033 Apob protein_coding protein_coding MGP_CBAJ_T0034034.1 MGP_CBAJ_G0019300.1 mouse_genomes_project 12 5685089 5689572 + MGP_CBAJ_P0034034 Apob protein_coding protein_coding MGP_CBAJ_T0006373.1 MGP_CBAJ_G0005303.1 mouse_genomes_project 12 116925905 116951520 - Gm16086 lincRNA lincRNA MGP_CBAJ_T0100015.1 MGP_CBAJ_G0038270.1 mouse_genomes_project 12 115945876 115946008 + Gm24986 snoRNA snoRNA MGP_CBAJ_T0000243.1 MGP_CBAJ_G0000188.1 mouse_genomes_project 12 125981801 125982235 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0034411.1 MGP_CBAJ_G0019438.1 mouse_genomes_project 12 53502006 53573953 + MGP_CBAJ_P0034411 Scfd1 protein_coding protein_coding MGP_CBAJ_T0009738.1 MGP_CBAJ_G0007876.1 mouse_genomes_project 12 119902085 119902166 + Mir758 miRNA miRNA MGP_CBAJ_T0034332.1 MGP_CBAJ_G0019413.1 mouse_genomes_project 12 36776756 36777696 - MGP_CBAJ_P0034332 D630036H23Rik protein_coding protein_coding MGP_CBAJ_T0009737.1 MGP_CBAJ_G0007875.1 mouse_genomes_project 12 119901783 119901869 + Mir323 miRNA miRNA MGP_CBAJ_T0034414.1 MGP_CBAJ_G0019440.1 mouse_genomes_project 12 53760196 53845865 - MGP_CBAJ_P0034414 Strn3 protein_coding protein_coding MGP_CBAJ_T0034415.1 MGP_CBAJ_G0019440.1 mouse_genomes_project 12 53760196 53845865 - MGP_CBAJ_P0034415 Strn3 protein_coding protein_coding MGP_CBAJ_T0100028.1 MGP_CBAJ_G0038283.1 mouse_genomes_project 12 119848021 119848093 + Gm27604 snoRNA snoRNA MGP_CBAJ_T0012693.1 MGP_CBAJ_G0010805.1 mouse_genomes_project 12 124999664 124999975 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006355.1 MGP_CBAJ_G0005289.1 mouse_genomes_project 12 107966567 108030945 + Gm26839 lincRNA lincRNA MGP_CBAJ_T0000127.1 MGP_CBAJ_G0000096.1 mouse_genomes_project 12 127471347 127471640 - MGP_CBAJ_P0000127 IG_V_gene IG_V_gene MGP_CBAJ_T0012663.1 MGP_CBAJ_G0010775.1 mouse_genomes_project 12 87505019 87505331 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012656.1 MGP_CBAJ_G0010768.1 mouse_genomes_project 12 76666602 76669575 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0034566.1 MGP_CBAJ_G0019498.1 mouse_genomes_project 12 73637131 73638592 - MGP_CBAJ_P0034566 Rps29 protein_coding protein_coding MGP_CBAJ_T0034567.1 MGP_CBAJ_G0019498.1 mouse_genomes_project 12 73637767 73638460 - Rps29 protein_coding retained_intron MGP_CBAJ_T0034412.1 MGP_CBAJ_G0019439.1 mouse_genomes_project 12 53744996 53757429 + MGP_CBAJ_P0034412 Coch protein_coding protein_coding MGP_CBAJ_T0034413.1 MGP_CBAJ_G0019439.1 mouse_genomes_project 12 53744996 53757429 + MGP_CBAJ_P0034413 Coch protein_coding protein_coding MGP_CBAJ_T0035411.1 MGP_CBAJ_G0019766.1 mouse_genomes_project 12 112406827 112415153 + MGP_CBAJ_P0035411 Ifi27 protein_coding protein_coding MGP_CBAJ_T0035412.1 MGP_CBAJ_G0019766.1 mouse_genomes_project 12 112406827 112415153 + MGP_CBAJ_P0035412 Ifi27 protein_coding protein_coding MGP_CBAJ_T0035413.1 MGP_CBAJ_G0019766.1 mouse_genomes_project 12 112406827 112415153 + MGP_CBAJ_P0035413 Ifi27 protein_coding protein_coding MGP_CBAJ_T0035414.1 MGP_CBAJ_G0019766.1 mouse_genomes_project 12 112406828 112415185 + MGP_CBAJ_P0035414 Ifi27 protein_coding protein_coding MGP_CBAJ_T0035415.1 MGP_CBAJ_G0019766.1 mouse_genomes_project 12 112406861 112412582 + Ifi27 protein_coding retained_intron MGP_CBAJ_T0035416.1 MGP_CBAJ_G0019766.1 mouse_genomes_project 12 112406875 112415185 + MGP_CBAJ_P0035416 Ifi27 protein_coding protein_coding MGP_CBAJ_T0035417.1 MGP_CBAJ_G0019766.1 mouse_genomes_project 12 112406901 112411919 + Ifi27 protein_coding retained_intron MGP_CBAJ_T0035418.1 MGP_CBAJ_G0019766.1 mouse_genomes_project 12 112406908 112412474 + MGP_CBAJ_P0035418 Ifi27 protein_coding protein_coding MGP_CBAJ_T0035419.1 MGP_CBAJ_G0019766.1 mouse_genomes_project 12 112412572 112415185 + Ifi27 protein_coding retained_intron MGP_CBAJ_T0009749.1 MGP_CBAJ_G0007887.1 mouse_genomes_project 12 119912747 119912829 + Mir376b miRNA miRNA MGP_CBAJ_T0035689.1 MGP_CBAJ_G0019863.1 mouse_genomes_project 12 123141394 123170152 + MGP_CBAJ_P0035689 Inf2 protein_coding protein_coding MGP_CBAJ_T0101583.1 MGP_CBAJ_G0039614.1 mouse_genomes_project 12 113322570 113327566 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0034073.1 MGP_CBAJ_G0019313.1 mouse_genomes_project 12 8400425 8423310 + MGP_CBAJ_P0034073 Nt5c1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0034074.1 MGP_CBAJ_G0019313.1 mouse_genomes_project 12 8400431 8408432 + MGP_CBAJ_P0034074 Nt5c1b protein_coding protein_coding MGP_CBAJ_T0034075.1 MGP_CBAJ_G0019313.1 mouse_genomes_project 12 8400431 8423313 + MGP_CBAJ_P0034075 Nt5c1b protein_coding protein_coding MGP_CBAJ_T0034076.1 MGP_CBAJ_G0019313.1 mouse_genomes_project 12 8400496 8423310 + MGP_CBAJ_P0034076 Nt5c1b protein_coding protein_coding MGP_CBAJ_T0034007.1 MGP_CBAJ_G0019290.1 mouse_genomes_project 12 1977521 2004370 - MGP_CBAJ_P0034007 Fam228a protein_coding protein_coding MGP_CBAJ_T0034008.1 MGP_CBAJ_G0019290.1 mouse_genomes_project 12 1979255 2004261 - MGP_CBAJ_P0034008 Fam228a protein_coding unknown_likely_coding MGP_CBAJ_T0034037.1 MGP_CBAJ_G0019303.1 mouse_genomes_project 12 6029491 6062223 + MGP_CBAJ_P0034037 Hs1bp3 protein_coding protein_coding MGP_CBAJ_T0000240.1 MGP_CBAJ_G0000185.1 mouse_genomes_project 12 125507310 125507749 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0012637.1 MGP_CBAJ_G0010749.1 mouse_genomes_project 12 30817300 30821236 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0034930.1 MGP_CBAJ_G0019626.1 mouse_genomes_project 12 89530821 89691802 - MGP_CBAJ_P0034930 Dpf3 protein_coding protein_coding MGP_CBAJ_T0034931.1 MGP_CBAJ_G0019626.1 mouse_genomes_project 12 89530827 89855780 - MGP_CBAJ_P0034931 Dpf3 protein_coding protein_coding MGP_CBAJ_T0034932.1 MGP_CBAJ_G0019626.1 mouse_genomes_project 12 89583564 89623517 - MGP_CBAJ_P0034932 Dpf3 protein_coding protein_coding MGP_CBAJ_T0034933.1 MGP_CBAJ_G0019626.1 mouse_genomes_project 12 89592269 89855772 - MGP_CBAJ_P0034933 Dpf3 protein_coding protein_coding MGP_CBAJ_T0034934.1 MGP_CBAJ_G0019626.1 mouse_genomes_project 12 89592386 89800454 - MGP_CBAJ_P0034934 Dpf3 protein_coding protein_coding MGP_CBAJ_T0034935.1 MGP_CBAJ_G0019626.1 mouse_genomes_project 12 89592496 89855772 - MGP_CBAJ_P0034935 Dpf3 protein_coding protein_coding MGP_CBAJ_T0101031.1 MGP_CBAJ_G0039264.1 mouse_genomes_project 12 19099971 19100118 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0098761.1 MGP_CBAJ_G0037016.1 mouse_genomes_project 12 64069595 64069702 + Gm23059 snRNA snRNA MGP_CBAJ_T0017045.1 MGP_CBAJ_G0014970.1 mouse_genomes_project 12 76092251 76098680 - 4930474H06Rik processed_transcript processed_transcript MGP_CBAJ_T0100018.1 MGP_CBAJ_G0038273.1 mouse_genomes_project 12 119823291 119823364 + AF357425 snoRNA snoRNA MGP_CBAJ_T0012658.1 MGP_CBAJ_G0010770.1 mouse_genomes_project 12 79125768 79126065 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098767.1 MGP_CBAJ_G0037022.1 mouse_genomes_project 12 74129349 74129455 - Gm24449 snRNA snRNA MGP_CBAJ_T0011196.1 MGP_CBAJ_G0009334.1 mouse_genomes_project 12 16459646 16462631 - Gm25925 misc_RNA misc_RNA MGP_CBAJ_T0000220.1 MGP_CBAJ_G0000165.1 mouse_genomes_project 12 124260110 124263018 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0006345.1 MGP_CBAJ_G0005279.1 mouse_genomes_project 12 90489198 90508038 - 4732463B04Rik lincRNA lincRNA MGP_CBAJ_T0035372.1 MGP_CBAJ_G0019752.1 mouse_genomes_project 12 111640353 111659723 - MGP_CBAJ_P0035372 Gm20604 protein_coding protein_coding MGP_CBAJ_T0034030.1 MGP_CBAJ_G0019299.1 mouse_genomes_project 12 2387264 2708965 - MGP_CBAJ_P0034030 Klhl29 protein_coding protein_coding MGP_CBAJ_T0034597.1 MGP_CBAJ_G0019513.1 mouse_genomes_project 12 74293086 74327218 + MGP_CBAJ_P0034597 Atp5s protein_coding protein_coding MGP_CBAJ_T0012676.1 MGP_CBAJ_G0010788.1 mouse_genomes_project 12 109802407 109803200 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012669.1 MGP_CBAJ_G0010781.1 mouse_genomes_project 12 93974667 93974782 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0035144.1 MGP_CBAJ_G0019688.1 mouse_genomes_project 12 93758586 93763037 - MGP_CBAJ_P0035144 Irf2bpl protein_coding protein_coding MGP_CBAJ_T0034326.1 MGP_CBAJ_G0019409.1 mouse_genomes_project 12 36458327 36538824 - MGP_CBAJ_P0034326 Bzw2 protein_coding protein_coding MGP_CBAJ_T0034530.1 MGP_CBAJ_G0019484.1 mouse_genomes_project 12 62340564 62359638 - MGP_CBAJ_P0034530 Fbxo33 protein_coding protein_coding MGP_CBAJ_T0034531.1 MGP_CBAJ_G0019484.1 mouse_genomes_project 12 62340566 62344347 - MGP_CBAJ_P0034531 Fbxo33 protein_coding protein_coding MGP_CBAJ_T0034532.1 MGP_CBAJ_G0019484.1 mouse_genomes_project 12 62344462 62358714 - MGP_CBAJ_P0034532 Fbxo33 protein_coding protein_coding MGP_CBAJ_T0035709.1 MGP_CBAJ_G0019870.1 mouse_genomes_project 12 123348644 123375482 - MGP_CBAJ_P0035709 protein_coding unknown_likely_coding MGP_CBAJ_T0035710.1 MGP_CBAJ_G0019870.1 mouse_genomes_project 12 123348891 123351712 - MGP_CBAJ_P0035710 protein_coding protein_coding MGP_CBAJ_T0035130.1 MGP_CBAJ_G0019684.1 mouse_genomes_project 12 93141538 93316226 + MGP_CBAJ_P0035130 Esrrb protein_coding protein_coding MGP_CBAJ_T0035131.1 MGP_CBAJ_G0019684.1 mouse_genomes_project 12 93203537 93316223 + MGP_CBAJ_P0035131 Esrrb protein_coding protein_coding MGP_CBAJ_T0035132.1 MGP_CBAJ_G0019684.1 mouse_genomes_project 12 93203537 93306580 + MGP_CBAJ_P0035132 Esrrb protein_coding protein_coding MGP_CBAJ_T0035133.1 MGP_CBAJ_G0019684.1 mouse_genomes_project 12 93203776 93314398 + MGP_CBAJ_P0035133 Esrrb protein_coding protein_coding MGP_CBAJ_T0035134.1 MGP_CBAJ_G0019684.1 mouse_genomes_project 12 93251898 93313663 + MGP_CBAJ_P0035134 Esrrb protein_coding protein_coding MGP_CBAJ_T0035135.1 MGP_CBAJ_G0019684.1 mouse_genomes_project 12 93294462 93301025 + Esrrb protein_coding processed_transcript MGP_CBAJ_T0012630.1 MGP_CBAJ_G0010742.1 mouse_genomes_project 12 1029706 1030225 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0034731.1 MGP_CBAJ_G0019559.1 mouse_genomes_project 12 80663306 80758827 + MGP_CBAJ_P0034731 Rhoj protein_coding protein_coding MGP_CBAJ_T0034732.1 MGP_CBAJ_G0019559.1 mouse_genomes_project 12 80663306 80762327 + MGP_CBAJ_P0034732 Rhoj protein_coding protein_coding MGP_CBAJ_T0034733.1 MGP_CBAJ_G0019559.1 mouse_genomes_project 12 80663306 80756688 + MGP_CBAJ_P0034733 Rhoj protein_coding protein_coding MGP_CBAJ_T0034734.1 MGP_CBAJ_G0019559.1 mouse_genomes_project 12 80663657 80740526 + Rhoj protein_coding retained_intron MGP_CBAJ_T0034735.1 MGP_CBAJ_G0019559.1 mouse_genomes_project 12 80663865 80761083 + MGP_CBAJ_P0034735 Rhoj protein_coding nonsense_mediated_decay MGP_CBAJ_T0034096.1 MGP_CBAJ_G0019328.1 mouse_genomes_project 12 15186030 15241489 - MGP_CBAJ_P0034096 Lpin1 protein_coding protein_coding MGP_CBAJ_T0034097.1 MGP_CBAJ_G0019328.1 mouse_genomes_project 12 15186030 15241489 - MGP_CBAJ_P0034097 Lpin1 protein_coding protein_coding MGP_CBAJ_T0034624.1 MGP_CBAJ_G0019521.1 mouse_genomes_project 12 74855335 74891259 - MGP_CBAJ_P0034624 Pygl protein_coding protein_coding MGP_CBAJ_T0034625.1 MGP_CBAJ_G0019521.1 mouse_genomes_project 12 74861970 74862413 - Pygl protein_coding processed_transcript MGP_CBAJ_T0034626.1 MGP_CBAJ_G0019521.1 mouse_genomes_project 12 74876669 74891288 - Pygl protein_coding retained_intron MGP_CBAJ_T0034627.1 MGP_CBAJ_G0019521.1 mouse_genomes_project 12 74880231 74891021 - Pygl protein_coding processed_transcript MGP_CBAJ_T0035727.1 MGP_CBAJ_G0019881.1 mouse_genomes_project 12 123678288 123746637 + MGP_CBAJ_P0035727 Mta1 protein_coding protein_coding MGP_CBAJ_T0035728.1 MGP_CBAJ_G0019881.1 mouse_genomes_project 12 123721882 123746094 + Mta1 protein_coding processed_transcript MGP_CBAJ_T0035729.1 MGP_CBAJ_G0019881.1 mouse_genomes_project 12 123740899 123742941 + Mta1 protein_coding processed_transcript MGP_CBAJ_T0035730.1 MGP_CBAJ_G0019881.1 mouse_genomes_project 12 123741115 123742899 + Mta1 protein_coding processed_transcript MGP_CBAJ_T0034303.1 MGP_CBAJ_G0019395.1 mouse_genomes_project 12 33436261 33442978 + MGP_CBAJ_P0034303 Efcab10 protein_coding protein_coding MGP_CBAJ_T0098744.1 MGP_CBAJ_G0036999.1 mouse_genomes_project 12 11875207 11875314 - Gm22170 snRNA snRNA MGP_CBAJ_T0034227.1 MGP_CBAJ_G0019373.1 mouse_genomes_project 12 30678156 30701748 - MGP_CBAJ_P0034227 Acp1 protein_coding protein_coding MGP_CBAJ_T0034228.1 MGP_CBAJ_G0019373.1 mouse_genomes_project 12 30681750 30701668 - MGP_CBAJ_P0034228 Acp1 protein_coding protein_coding MGP_CBAJ_T0003331.1 MGP_CBAJ_G0003060.1 mouse_genomes_project 12 79433007 79445214 - Gm29587 antisense antisense MGP_CBAJ_T0000237.1 MGP_CBAJ_G0000182.1 mouse_genomes_project 12 125365364 125365663 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0000094.1 MGP_CBAJ_G0000071.1 mouse_genomes_project 12 125285083 125285540 - MGP_CBAJ_P0000094 IG_V_gene IG_V_gene MGP_CBAJ_T0098764.1 MGP_CBAJ_G0037019.1 mouse_genomes_project 12 69497628 69497731 + Gm25599 snRNA snRNA MGP_CBAJ_T0100004.1 MGP_CBAJ_G0038259.1 mouse_genomes_project 12 83467463 83467593 - Gm24070 snoRNA snoRNA MGP_CBAJ_T0009753.1 MGP_CBAJ_G0007891.1 mouse_genomes_project 12 119916111 119916186 + Mir381 miRNA miRNA MGP_CBAJ_T0034728.1 MGP_CBAJ_G0019556.1 mouse_genomes_project 12 79516034 79519030 + MGP_CBAJ_P0034728 Dbpht2 protein_coding protein_coding MGP_CBAJ_T0035526.1 MGP_CBAJ_G0019813.1 mouse_genomes_project 12 118371035 118412415 + MGP_CBAJ_P0035526 Cyp46a1 protein_coding protein_coding MGP_CBAJ_T0034015.1 MGP_CBAJ_G0019295.1 mouse_genomes_project 12 2110872 2120275 + MGP_CBAJ_P0034015 BC068281 protein_coding protein_coding MGP_CBAJ_T0034016.1 MGP_CBAJ_G0019295.1 mouse_genomes_project 12 2117525 2126669 + MGP_CBAJ_P0034016 BC068281 protein_coding protein_coding MGP_CBAJ_T0000095.1 MGP_CBAJ_G0000072.1 mouse_genomes_project 12 125305169 125305627 - MGP_CBAJ_P0000095 Ighv6-7 IG_V_gene IG_V_gene MGP_CBAJ_T0035605.1 MGP_CBAJ_G0019835.1 mouse_genomes_project 12 121340279 121343967 - MGP_CBAJ_P0035605 Ankrd9 protein_coding protein_coding MGP_CBAJ_T0035606.1 MGP_CBAJ_G0019835.1 mouse_genomes_project 12 121341352 121343182 - MGP_CBAJ_P0035606 Ankrd9 protein_coding protein_coding MGP_CBAJ_T0035607.1 MGP_CBAJ_G0019835.1 mouse_genomes_project 12 121341353 121343870 - MGP_CBAJ_P0035607 Ankrd9 protein_coding protein_coding MGP_CBAJ_T0035608.1 MGP_CBAJ_G0019835.1 mouse_genomes_project 12 121341353 121343948 - MGP_CBAJ_P0035608 Ankrd9 protein_coding protein_coding MGP_CBAJ_T0035609.1 MGP_CBAJ_G0019835.1 mouse_genomes_project 12 121341353 121343545 - MGP_CBAJ_P0035609 Ankrd9 protein_coding protein_coding MGP_CBAJ_T0035610.1 MGP_CBAJ_G0019835.1 mouse_genomes_project 12 121341355 121343922 - MGP_CBAJ_P0035610 Ankrd9 protein_coding protein_coding MGP_CBAJ_T0035611.1 MGP_CBAJ_G0019835.1 mouse_genomes_project 12 121342898 121343506 - Ankrd9 protein_coding processed_transcript MGP_CBAJ_T0034810.1 MGP_CBAJ_G0019585.1 mouse_genomes_project 12 84520872 84615756 + MGP_CBAJ_P0034810 Mpp5 protein_coding unknown_likely_coding MGP_CBAJ_T0034091.1 MGP_CBAJ_G0019324.1 mouse_genomes_project 12 11549148 11577147 - MGP_CBAJ_P0034091 Ddx1 protein_coding protein_coding MGP_CBAJ_T0034575.1 MGP_CBAJ_G0019504.1 mouse_genomes_project 12 73691205 73717324 - MGP_CBAJ_P0034575 Pole2 protein_coding protein_coding MGP_CBAJ_T0034440.1 MGP_CBAJ_G0019455.1 mouse_genomes_project 12 57418640 57521994 - MGP_CBAJ_P0034440 Baz1a protein_coding protein_coding MGP_CBAJ_T0034441.1 MGP_CBAJ_G0019455.1 mouse_genomes_project 12 57419296 57522165 - MGP_CBAJ_P0034441 Baz1a protein_coding protein_coding MGP_CBAJ_T0034442.1 MGP_CBAJ_G0019455.1 mouse_genomes_project 12 57421069 57422051 - Baz1a protein_coding retained_intron MGP_CBAJ_T0034443.1 MGP_CBAJ_G0019455.1 mouse_genomes_project 12 57452449 57459718 - MGP_CBAJ_P0034443 Baz1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0034444.1 MGP_CBAJ_G0019455.1 mouse_genomes_project 12 57469720 57475110 - MGP_CBAJ_P0034444 Baz1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0034445.1 MGP_CBAJ_G0019455.1 mouse_genomes_project 12 57488639 57552537 - MGP_CBAJ_P0034445 Baz1a protein_coding protein_coding MGP_CBAJ_T0034446.1 MGP_CBAJ_G0019455.1 mouse_genomes_project 12 57510854 57521560 - MGP_CBAJ_P0034446 Baz1a protein_coding protein_coding MGP_CBAJ_T0034447.1 MGP_CBAJ_G0019455.1 mouse_genomes_project 12 57510869 57534847 - MGP_CBAJ_P0034447 Baz1a protein_coding protein_coding MGP_CBAJ_T0035177.1 MGP_CBAJ_G0019700.1 mouse_genomes_project 12 94192148 94213113 - MGP_CBAJ_P0035177 Ism2 protein_coding protein_coding MGP_CBAJ_T0035178.1 MGP_CBAJ_G0019700.1 mouse_genomes_project 12 94193192 94200696 - MGP_CBAJ_P0035178 Ism2 protein_coding protein_coding MGP_CBAJ_T0035179.1 MGP_CBAJ_G0019700.1 mouse_genomes_project 12 94195980 94200632 - Ism2 protein_coding processed_transcript MGP_CBAJ_T0035455.1 MGP_CBAJ_G0019783.1 mouse_genomes_project 12 113553046 113559227 + MGP_CBAJ_P0035455 Serpina3j protein_coding protein_coding MGP_CBAJ_T0000114.1 MGP_CBAJ_G0000085.1 mouse_genomes_project 12 126043276 126043570 - MGP_CBAJ_P0000114 Ighv8-4 IG_V_gene IG_V_gene MGP_CBAJ_T0000115.1 MGP_CBAJ_G0000085.1 mouse_genomes_project 12 126043276 126043710 - MGP_CBAJ_P0000115 Ighv8-4 IG_V_gene IG_V_gene MGP_CBAJ_T0009722.1 MGP_CBAJ_G0007860.1 mouse_genomes_project 12 119782219 119782294 + Mir432 miRNA miRNA MGP_CBAJ_T0035461.1 MGP_CBAJ_G0019787.1 mouse_genomes_project 12 113787596 113789718 - MGP_CBAJ_P0035461 Gsc protein_coding protein_coding MGP_CBAJ_T0009765.1 MGP_CBAJ_G0007903.1 mouse_genomes_project 12 119928418 119928497 + Mir496a miRNA miRNA MGP_CBAJ_T0033987.1 MGP_CBAJ_G0019283.1 mouse_genomes_project 12 1268887 1381630 + Adcy3 protein_coding retained_intron MGP_CBAJ_T0033988.1 MGP_CBAJ_G0019283.1 mouse_genomes_project 12 1268888 1381630 + MGP_CBAJ_P0033988 Adcy3 protein_coding protein_coding MGP_CBAJ_T0033989.1 MGP_CBAJ_G0019283.1 mouse_genomes_project 12 1269181 1381630 + MGP_CBAJ_P0033989 Adcy3 protein_coding protein_coding MGP_CBAJ_T0033990.1 MGP_CBAJ_G0019283.1 mouse_genomes_project 12 1269186 1381629 + MGP_CBAJ_P0033990 Adcy3 protein_coding protein_coding MGP_CBAJ_T0033991.1 MGP_CBAJ_G0019283.1 mouse_genomes_project 12 1269937 1381629 + MGP_CBAJ_P0033991 Adcy3 protein_coding protein_coding MGP_CBAJ_T0033992.1 MGP_CBAJ_G0019283.1 mouse_genomes_project 12 1307021 1347052 + Adcy3 protein_coding processed_transcript MGP_CBAJ_T0033993.1 MGP_CBAJ_G0019283.1 mouse_genomes_project 12 1361354 1363442 + Adcy3 protein_coding retained_intron MGP_CBAJ_T0033996.1 MGP_CBAJ_G0019283.1 mouse_genomes_project 12 1371564 1374552 + Adcy3 protein_coding retained_intron MGP_CBAJ_T0009759.1 MGP_CBAJ_G0007897.1 mouse_genomes_project 12 119923074 119923150 + Mir382 miRNA miRNA MGP_CBAJ_T0006322.1 MGP_CBAJ_G0005262.1 mouse_genomes_project 12 51362500 51366372 - 1810007C17Rik lincRNA lincRNA MGP_CBAJ_T0035339.1 MGP_CBAJ_G0019742.1 mouse_genomes_project 12 110607271 110696315 - MGP_CBAJ_P0035339 Trip11 protein_coding protein_coding MGP_CBAJ_T0035340.1 MGP_CBAJ_G0019742.1 mouse_genomes_project 12 110611187 110671627 - MGP_CBAJ_P0035340 Trip11 protein_coding protein_coding MGP_CBAJ_T0035341.1 MGP_CBAJ_G0019742.1 mouse_genomes_project 12 110649003 110661085 - MGP_CBAJ_P0035341 Trip11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035342.1 MGP_CBAJ_G0019742.1 mouse_genomes_project 12 110663697 110696171 - MGP_CBAJ_P0035342 Trip11 protein_coding protein_coding MGP_CBAJ_T0035343.1 MGP_CBAJ_G0019742.1 mouse_genomes_project 12 110667029 110696188 - MGP_CBAJ_P0035343 Trip11 protein_coding protein_coding MGP_CBAJ_T0035344.1 MGP_CBAJ_G0019742.1 mouse_genomes_project 12 110695323 110696203 - Trip11 protein_coding processed_transcript MGP_CBAJ_T0034688.1 MGP_CBAJ_G0019541.1 mouse_genomes_project 12 77577599 77597145 - MGP_CBAJ_P0034688 Dhrs7 protein_coding protein_coding MGP_CBAJ_T0034478.1 MGP_CBAJ_G0019473.1 mouse_genomes_project 12 60116333 60207471 + Mipol1 protein_coding retained_intron MGP_CBAJ_T0034479.1 MGP_CBAJ_G0019473.1 mouse_genomes_project 12 60116340 60260551 + Mipol1 protein_coding retained_intron MGP_CBAJ_T0034480.1 MGP_CBAJ_G0019473.1 mouse_genomes_project 12 60116342 60225199 + Mipol1 protein_coding retained_intron MGP_CBAJ_T0034481.1 MGP_CBAJ_G0019473.1 mouse_genomes_project 12 60116352 60431878 + MGP_CBAJ_P0034481 Mipol1 protein_coding protein_coding MGP_CBAJ_T0034482.1 MGP_CBAJ_G0019473.1 mouse_genomes_project 12 60116352 60386776 + MGP_CBAJ_P0034482 Mipol1 protein_coding protein_coding MGP_CBAJ_T0034483.1 MGP_CBAJ_G0019473.1 mouse_genomes_project 12 60116397 60276787 + Mipol1 protein_coding retained_intron MGP_CBAJ_T0034484.1 MGP_CBAJ_G0019473.1 mouse_genomes_project 12 60173593 60431878 + MGP_CBAJ_P0034484 Mipol1 protein_coding protein_coding MGP_CBAJ_T0034485.1 MGP_CBAJ_G0019473.1 mouse_genomes_project 12 60173593 60396427 + MGP_CBAJ_P0034485 Mipol1 protein_coding protein_coding MGP_CBAJ_T0034486.1 MGP_CBAJ_G0019473.1 mouse_genomes_project 12 60203107 60204699 + Mipol1 protein_coding retained_intron MGP_CBAJ_T0034487.1 MGP_CBAJ_G0019473.1 mouse_genomes_project 12 60233891 60276206 + Mipol1 protein_coding processed_transcript MGP_CBAJ_T0035329.1 MGP_CBAJ_G0019737.1 mouse_genomes_project 12 109478420 109608050 - MGP_CBAJ_P0035329 Ccdc88c protein_coding protein_coding MGP_CBAJ_T0035330.1 MGP_CBAJ_G0019737.1 mouse_genomes_project 12 109478420 109608050 - MGP_CBAJ_P0035330 Ccdc88c protein_coding protein_coding MGP_CBAJ_T0012648.1 MGP_CBAJ_G0010760.1 mouse_genomes_project 12 60592579 60593017 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000108.1 MGP_CBAJ_G0000082.1 mouse_genomes_project 12 125537654 125537948 - MGP_CBAJ_P0000108 Ighv1-12 IG_V_gene IG_V_gene MGP_CBAJ_T0000109.1 MGP_CBAJ_G0000082.1 mouse_genomes_project 12 125537654 125538123 - MGP_CBAJ_P0000109 Ighv1-12 IG_V_gene IG_V_gene MGP_CBAJ_T0000110.1 MGP_CBAJ_G0000082.1 mouse_genomes_project 12 125537654 125538123 - MGP_CBAJ_P0000110 Ighv1-12 IG_V_gene IG_V_gene MGP_CBAJ_T0009744.1 MGP_CBAJ_G0007882.1 mouse_genomes_project 12 119906537 119906613 + Mir543 miRNA miRNA MGP_CBAJ_T0098757.1 MGP_CBAJ_G0037012.1 mouse_genomes_project 12 57206819 57206983 - Gm25679 snRNA snRNA MGP_CBAJ_T0000059.1 MGP_CBAJ_G0000046.1 mouse_genomes_project 12 124667127 124667585 - MGP_CBAJ_P0000059 Ighv5-16 IG_V_gene IG_V_gene MGP_CBAJ_T0000060.1 MGP_CBAJ_G0000046.1 mouse_genomes_project 12 124667127 124667612 - MGP_CBAJ_P0000060 Ighv5-16 IG_V_gene IG_V_gene MGP_CBAJ_T0009689.1 MGP_CBAJ_G0007827.1 mouse_genomes_project 12 92408428 92408489 - miRNA miRNA MGP_CBAJ_T0034165.1 MGP_CBAJ_G0019349.1 mouse_genomes_project 12 23751490 23762964 + MGP_CBAJ_P0034165 Klf11 protein_coding protein_coding MGP_CBAJ_T0034166.1 MGP_CBAJ_G0019349.1 mouse_genomes_project 12 23752015 23755242 + MGP_CBAJ_P0034166 Klf11 protein_coding protein_coding MGP_CBAJ_T0034167.1 MGP_CBAJ_G0019349.1 mouse_genomes_project 12 23752015 23753913 + MGP_CBAJ_P0034167 Klf11 protein_coding protein_coding MGP_CBAJ_T0034168.1 MGP_CBAJ_G0019349.1 mouse_genomes_project 12 23752272 23755237 + MGP_CBAJ_P0034168 Klf11 protein_coding protein_coding MGP_CBAJ_T0006358.1 MGP_CBAJ_G0005292.1 mouse_genomes_project 12 109507375 109515508 + A630072L19Rik lincRNA lincRNA MGP_CBAJ_T0034736.1 MGP_CBAJ_G0019560.1 mouse_genomes_project 12 80774175 80779237 - MGP_CBAJ_P0034736 Gphb5 protein_coding protein_coding MGP_CBAJ_T0000246.1 MGP_CBAJ_G0000191.1 mouse_genomes_project 12 126022886 126023187 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0006350.1 MGP_CBAJ_G0005284.1 mouse_genomes_project 12 94245764 94248748 + Gm26764 lincRNA lincRNA MGP_CBAJ_T0035569.1 MGP_CBAJ_G0019825.1 mouse_genomes_project 12 120511812 120513842 + MGP_CBAJ_P0035569 protein_coding protein_coding MGP_CBAJ_T0035570.1 MGP_CBAJ_G0019825.1 mouse_genomes_project 12 120512004 120513453 + MGP_CBAJ_P0035570 protein_coding protein_coding MGP_CBAJ_T0017036.1 MGP_CBAJ_G0014966.1 mouse_genomes_project 12 20235004 20238810 - Gm20535 processed_transcript processed_transcript MGP_CBAJ_T0034322.1 MGP_CBAJ_G0019407.1 mouse_genomes_project 12 36366716 36405437 - MGP_CBAJ_P0034322 Tspan13 protein_coding protein_coding MGP_CBAJ_T0034323.1 MGP_CBAJ_G0019407.1 mouse_genomes_project 12 36378242 36405448 - MGP_CBAJ_P0034323 Tspan13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034324.1 MGP_CBAJ_G0019407.1 mouse_genomes_project 12 36378253 36402884 - MGP_CBAJ_P0034324 Tspan13 protein_coding protein_coding MGP_CBAJ_T0035244.1 MGP_CBAJ_G0019715.1 mouse_genomes_project 12 99077700 99245442 - MGP_CBAJ_P0035244 protein_coding protein_coding MGP_CBAJ_T0035245.1 MGP_CBAJ_G0019715.1 mouse_genomes_project 12 99080669 99194970 - MGP_CBAJ_P0035245 protein_coding protein_coding MGP_CBAJ_T0035246.1 MGP_CBAJ_G0019715.1 mouse_genomes_project 12 99152859 99163348 - protein_coding processed_transcript MGP_CBAJ_T0035247.1 MGP_CBAJ_G0019715.1 mouse_genomes_project 12 99163455 99238143 - MGP_CBAJ_P0035247 protein_coding protein_coding MGP_CBAJ_T0035248.1 MGP_CBAJ_G0019715.1 mouse_genomes_project 12 99186223 99230189 - protein_coding processed_transcript MGP_CBAJ_T0035249.1 MGP_CBAJ_G0019715.1 mouse_genomes_project 12 99194732 99197197 - MGP_CBAJ_P0035249 protein_coding protein_coding MGP_CBAJ_T0035250.1 MGP_CBAJ_G0019715.1 mouse_genomes_project 12 99244806 99247393 - protein_coding processed_transcript MGP_CBAJ_T0000107.1 MGP_CBAJ_G0000081.1 mouse_genomes_project 12 125534034 125534467 - MGP_CBAJ_P0000107 Ighv1-11 IG_V_gene IG_V_gene MGP_CBAJ_T0006306.1 MGP_CBAJ_G0005251.1 mouse_genomes_project 12 20430195 20431884 + Gm4419 lincRNA lincRNA MGP_CBAJ_T0099986.1 MGP_CBAJ_G0038241.1 mouse_genomes_project 12 42376575 42376707 - Gm25497 snoRNA snoRNA MGP_CBAJ_T0097761.1 MGP_CBAJ_G0036034.1 mouse_genomes_project 12 35206703 35208321 + pseudogene pseudogene MGP_CBAJ_T0000056.1 MGP_CBAJ_G0000044.1 mouse_genomes_project 12 124637243 124637682 - MGP_CBAJ_P0000056 Ighv2-7 IG_V_gene IG_V_gene MGP_CBAJ_T0034618.1 MGP_CBAJ_G0019520.1 mouse_genomes_project 12 74796222 74827443 + Abhd12b protein_coding retained_intron MGP_CBAJ_T0034619.1 MGP_CBAJ_G0019520.1 mouse_genomes_project 12 74796237 74827983 + MGP_CBAJ_P0034619 Abhd12b protein_coding protein_coding MGP_CBAJ_T0034620.1 MGP_CBAJ_G0019520.1 mouse_genomes_project 12 74796237 74827983 + MGP_CBAJ_P0034620 Abhd12b protein_coding nonsense_mediated_decay MGP_CBAJ_T0034621.1 MGP_CBAJ_G0019520.1 mouse_genomes_project 12 74796237 74827983 + MGP_CBAJ_P0034621 Abhd12b protein_coding nonsense_mediated_decay MGP_CBAJ_T0034622.1 MGP_CBAJ_G0019520.1 mouse_genomes_project 12 74796237 74827983 + MGP_CBAJ_P0034622 Abhd12b protein_coding protein_coding MGP_CBAJ_T0034623.1 MGP_CBAJ_G0019520.1 mouse_genomes_project 12 74826143 74827443 + Abhd12b protein_coding retained_intron MGP_CBAJ_T0000080.1 MGP_CBAJ_G0000061.1 mouse_genomes_project 12 125078410 125078845 - MGP_CBAJ_P0000080 Ighv3-4 IG_V_gene IG_V_gene MGP_CBAJ_T0011211.1 MGP_CBAJ_G0009349.1 mouse_genomes_project 12 112064922 112065084 + Gm27976 misc_RNA misc_RNA MGP_CBAJ_T0035621.1 MGP_CBAJ_G0019841.1 mouse_genomes_project 12 121792636 121797937 + MGP_CBAJ_P0035621 A230065H16Rik protein_coding protein_coding MGP_CBAJ_T0100025.1 MGP_CBAJ_G0038280.1 mouse_genomes_project 12 119844272 119844344 + Gm26922 snoRNA snoRNA MGP_CBAJ_T0035759.1 MGP_CBAJ_G0019889.1 mouse_genomes_project 12 127559042 127627133 + Vipr2 protein_coding retained_intron MGP_CBAJ_T0035760.1 MGP_CBAJ_G0019889.1 mouse_genomes_project 12 127559044 127633416 + MGP_CBAJ_P0035760 Vipr2 protein_coding protein_coding MGP_CBAJ_T0035761.1 MGP_CBAJ_G0019889.1 mouse_genomes_project 12 127559076 127582568 + Vipr2 protein_coding processed_transcript MGP_CBAJ_T0035762.1 MGP_CBAJ_G0019889.1 mouse_genomes_project 12 127559082 127578964 + Vipr2 protein_coding processed_transcript MGP_CBAJ_T0035763.1 MGP_CBAJ_G0019889.1 mouse_genomes_project 12 127559089 127618519 + Vipr2 protein_coding processed_transcript MGP_CBAJ_T0035764.1 MGP_CBAJ_G0019889.1 mouse_genomes_project 12 127622541 127630902 + MGP_CBAJ_P0035764 Vipr2 protein_coding protein_coding MGP_CBAJ_T0011213.1 MGP_CBAJ_G0009351.1 mouse_genomes_project 12 119726584 119726667 + Gm27596 misc_RNA misc_RNA MGP_CBAJ_T0006295.1 MGP_CBAJ_G0005241.1 mouse_genomes_project 12 348538 365780 - Gm26520 lincRNA lincRNA MGP_CBAJ_T0035421.1 MGP_CBAJ_G0019768.1 mouse_genomes_project 12 112437717 112448413 - MGP_CBAJ_P0035421 Ifi27l2b protein_coding protein_coding MGP_CBAJ_T0035242.1 MGP_CBAJ_G0019714.1 mouse_genomes_project 12 98981159 99020394 - MGP_CBAJ_P0035242 Gtf2a1 protein_coding protein_coding MGP_CBAJ_T0035243.1 MGP_CBAJ_G0019714.1 mouse_genomes_project 12 98986440 99020872 - MGP_CBAJ_P0035243 Gtf2a1 protein_coding protein_coding MGP_CBAJ_T0035513.1 MGP_CBAJ_G0019809.1 mouse_genomes_project 12 118083595 118159673 - MGP_CBAJ_P0035513 Setd3 protein_coding protein_coding MGP_CBAJ_T0035514.1 MGP_CBAJ_G0019809.1 mouse_genomes_project 12 118083627 118159564 - MGP_CBAJ_P0035514 Setd3 protein_coding unknown_likely_coding MGP_CBAJ_T0035515.1 MGP_CBAJ_G0019809.1 mouse_genomes_project 12 118084867 118093143 - Setd3 protein_coding retained_intron MGP_CBAJ_T0035516.1 MGP_CBAJ_G0019809.1 mouse_genomes_project 12 118085239 118159580 - MGP_CBAJ_P0035516 Setd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035517.1 MGP_CBAJ_G0019809.1 mouse_genomes_project 12 118090330 118093279 - Setd3 protein_coding processed_transcript MGP_CBAJ_T0035518.1 MGP_CBAJ_G0019809.1 mouse_genomes_project 12 118094973 118159569 - MGP_CBAJ_P0035518 Setd3 protein_coding protein_coding MGP_CBAJ_T0035519.1 MGP_CBAJ_G0019809.1 mouse_genomes_project 12 118095232 118159622 - MGP_CBAJ_P0035519 Setd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035520.1 MGP_CBAJ_G0019809.1 mouse_genomes_project 12 118096491 118143376 - Setd3 protein_coding processed_transcript MGP_CBAJ_T0035521.1 MGP_CBAJ_G0019809.1 mouse_genomes_project 12 118138361 118159566 - MGP_CBAJ_P0035521 Setd3 protein_coding protein_coding MGP_CBAJ_T0009693.1 MGP_CBAJ_G0007831.1 mouse_genomes_project 12 96551218 96551360 - Gm27313 miRNA miRNA MGP_CBAJ_T0098747.1 MGP_CBAJ_G0037002.1 mouse_genomes_project 12 20353149 20353248 + Gm22766 snRNA snRNA MGP_CBAJ_T0097933.1 MGP_CBAJ_G0036206.1 mouse_genomes_project 12 105501695 105501775 - Gm23558 rRNA rRNA MGP_CBAJ_T0034363.1 MGP_CBAJ_G0019422.1 mouse_genomes_project 12 41130806 41153454 - MGP_CBAJ_P0034363 Ifrd1 protein_coding protein_coding MGP_CBAJ_T0034364.1 MGP_CBAJ_G0019422.1 mouse_genomes_project 12 41132370 41136282 - MGP_CBAJ_P0034364 Ifrd1 protein_coding protein_coding MGP_CBAJ_T0034365.1 MGP_CBAJ_G0019422.1 mouse_genomes_project 12 41132559 41133882 - Ifrd1 protein_coding retained_intron MGP_CBAJ_T0034366.1 MGP_CBAJ_G0019422.1 mouse_genomes_project 12 41133158 41153227 - MGP_CBAJ_P0034366 Ifrd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034367.1 MGP_CBAJ_G0019422.1 mouse_genomes_project 12 41143199 41178519 - MGP_CBAJ_P0034367 Ifrd1 protein_coding protein_coding MGP_CBAJ_T0034368.1 MGP_CBAJ_G0019422.1 mouse_genomes_project 12 41143256 41146733 - MGP_CBAJ_P0034368 Ifrd1 protein_coding protein_coding MGP_CBAJ_T0034369.1 MGP_CBAJ_G0019422.1 mouse_genomes_project 12 41143313 41178926 - MGP_CBAJ_P0034369 Ifrd1 protein_coding protein_coding MGP_CBAJ_T0034370.1 MGP_CBAJ_G0019422.1 mouse_genomes_project 12 41144581 41153450 - Ifrd1 protein_coding retained_intron MGP_CBAJ_T0034371.1 MGP_CBAJ_G0019422.1 mouse_genomes_project 12 41145408 41178944 - MGP_CBAJ_P0034371 Ifrd1 protein_coding protein_coding MGP_CBAJ_T0034372.1 MGP_CBAJ_G0019422.1 mouse_genomes_project 12 41146377 41153414 - MGP_CBAJ_P0034372 Ifrd1 protein_coding protein_coding MGP_CBAJ_T0011201.1 MGP_CBAJ_G0009339.1 mouse_genomes_project 12 65400697 65401010 + Gm23213 misc_RNA misc_RNA MGP_CBAJ_T0009783.1 MGP_CBAJ_G0007921.1 mouse_genomes_project 12 125317824 125317884 - Mir7094-2 miRNA miRNA MGP_CBAJ_T0034333.1 MGP_CBAJ_G0019414.1 mouse_genomes_project 12 36777033 37103257 + MGP_CBAJ_P0034333 Ispd protein_coding protein_coding MGP_CBAJ_T0100011.1 MGP_CBAJ_G0038266.1 mouse_genomes_project 12 99001213 99001356 - Gm25776 snoRNA snoRNA MGP_CBAJ_T0006327.1 MGP_CBAJ_G0005265.1 mouse_genomes_project 12 62044865 62065145 + Gm17529 lincRNA lincRNA MGP_CBAJ_T0003316.1 MGP_CBAJ_G0003049.1 mouse_genomes_project 12 40926545 40928474 + Arl4aos antisense antisense MGP_CBAJ_T0009660.1 MGP_CBAJ_G0007798.1 mouse_genomes_project 12 9398471 9398529 + Mir7675 miRNA miRNA MGP_CBAJ_T0035534.1 MGP_CBAJ_G0019815.1 mouse_genomes_project 12 118631753 118777939 + MGP_CBAJ_P0035534 Evl protein_coding protein_coding MGP_CBAJ_T0035535.1 MGP_CBAJ_G0019815.1 mouse_genomes_project 12 118631753 118777939 + MGP_CBAJ_P0035535 Evl protein_coding protein_coding MGP_CBAJ_T0035536.1 MGP_CBAJ_G0019815.1 mouse_genomes_project 12 118681205 118777939 + MGP_CBAJ_P0035536 Evl protein_coding protein_coding MGP_CBAJ_T0035537.1 MGP_CBAJ_G0019815.1 mouse_genomes_project 12 118719989 118777939 + MGP_CBAJ_P0035537 Evl protein_coding protein_coding MGP_CBAJ_T0003317.1 MGP_CBAJ_G0003050.1 mouse_genomes_project 12 41127904 41130354 + Gm17056 antisense antisense MGP_CBAJ_T0035209.1 MGP_CBAJ_G0019709.1 mouse_genomes_project 12 95504618 95613233 + MGP_CBAJ_P0035209 Adck1 protein_coding protein_coding MGP_CBAJ_T0035210.1 MGP_CBAJ_G0019709.1 mouse_genomes_project 12 95504865 95613232 + MGP_CBAJ_P0035210 Adck1 protein_coding protein_coding MGP_CBAJ_T0035354.1 MGP_CBAJ_G0019746.1 mouse_genomes_project 12 111122594 111240246 + MGP_CBAJ_P0035354 Rin3 protein_coding protein_coding MGP_CBAJ_T0035355.1 MGP_CBAJ_G0019746.1 mouse_genomes_project 12 111122713 111209074 + MGP_CBAJ_P0035355 Rin3 protein_coding protein_coding MGP_CBAJ_T0035356.1 MGP_CBAJ_G0019746.1 mouse_genomes_project 12 111122714 111166791 + MGP_CBAJ_P0035356 Rin3 protein_coding protein_coding MGP_CBAJ_T0035357.1 MGP_CBAJ_G0019746.1 mouse_genomes_project 12 111123559 111240246 + MGP_CBAJ_P0035357 Rin3 protein_coding protein_coding MGP_CBAJ_T0035358.1 MGP_CBAJ_G0019746.1 mouse_genomes_project 12 111200712 111207495 + Rin3 protein_coding processed_transcript MGP_CBAJ_T0035359.1 MGP_CBAJ_G0019746.1 mouse_genomes_project 12 111200712 111214580 + Rin3 protein_coding processed_transcript MGP_CBAJ_T0035360.1 MGP_CBAJ_G0019746.1 mouse_genomes_project 12 111200747 111205219 + Rin3 protein_coding retained_intron MGP_CBAJ_T0034975.1 MGP_CBAJ_G0019636.1 mouse_genomes_project 12 90413152 90426636 + MGP_CBAJ_P0034975 Acot2 protein_coding protein_coding MGP_CBAJ_T0100027.1 MGP_CBAJ_G0038282.1 mouse_genomes_project 12 119846770 119846842 + Gm25357 snoRNA snoRNA MGP_CBAJ_T0034064.1 MGP_CBAJ_G0019310.1 mouse_genomes_project 12 6796710 6856500 + MGP_CBAJ_P0034064 Wdr35 protein_coding protein_coding MGP_CBAJ_T0034065.1 MGP_CBAJ_G0019310.1 mouse_genomes_project 12 6796829 6817640 + Wdr35 protein_coding retained_intron MGP_CBAJ_T0034066.1 MGP_CBAJ_G0019310.1 mouse_genomes_project 12 6796829 6817644 + MGP_CBAJ_P0034066 Wdr35 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034067.1 MGP_CBAJ_G0019310.1 mouse_genomes_project 12 6796865 6856499 + MGP_CBAJ_P0034067 Wdr35 protein_coding protein_coding MGP_CBAJ_T0034068.1 MGP_CBAJ_G0019310.1 mouse_genomes_project 12 6796877 6850603 + Wdr35 protein_coding retained_intron MGP_CBAJ_T0034069.1 MGP_CBAJ_G0019310.1 mouse_genomes_project 12 6797687 6808374 + Wdr35 protein_coding retained_intron MGP_CBAJ_T0034070.1 MGP_CBAJ_G0019310.1 mouse_genomes_project 12 6850209 6852119 + Wdr35 protein_coding retained_intron MGP_CBAJ_T0035702.1 MGP_CBAJ_G0019867.1 mouse_genomes_project 12 123242093 123246049 + MGP_CBAJ_P0035702 Zbtb42 protein_coding protein_coding MGP_CBAJ_T0035703.1 MGP_CBAJ_G0019867.1 mouse_genomes_project 12 123242105 123246049 + MGP_CBAJ_P0035703 Zbtb42 protein_coding protein_coding MGP_CBAJ_T0035704.1 MGP_CBAJ_G0019867.1 mouse_genomes_project 12 123242143 123243237 + MGP_CBAJ_P0035704 Zbtb42 protein_coding protein_coding MGP_CBAJ_T0000078.1 MGP_CBAJ_G0000060.1 mouse_genomes_project 12 125047009 125047472 - MGP_CBAJ_P0000078 Ighv7-4 IG_V_gene IG_V_gene MGP_CBAJ_T0000079.1 MGP_CBAJ_G0000060.1 mouse_genomes_project 12 125047009 125047546 - MGP_CBAJ_P0000079 Ighv7-4 IG_V_gene IG_V_gene MGP_CBAJ_T0034081.1 MGP_CBAJ_G0019317.1 mouse_genomes_project 12 9336777 9363260 - MGP_CBAJ_P0034081 Gen1 protein_coding protein_coding MGP_CBAJ_T0011199.1 MGP_CBAJ_G0009337.1 mouse_genomes_project 12 48376480 48376729 - Gm25051 misc_RNA misc_RNA MGP_CBAJ_T0009782.1 MGP_CBAJ_G0007920.1 mouse_genomes_project 12 123666448 123666548 - Gm44471 miRNA miRNA MGP_CBAJ_T0034992.1 MGP_CBAJ_G0019644.1 mouse_genomes_project 12 90642563 90718654 - MGP_CBAJ_P0034992 Elmsan1 protein_coding protein_coding MGP_CBAJ_T0034993.1 MGP_CBAJ_G0019644.1 mouse_genomes_project 12 90642665 90689184 - MGP_CBAJ_P0034993 Elmsan1 protein_coding protein_coding MGP_CBAJ_T0034994.1 MGP_CBAJ_G0019644.1 mouse_genomes_project 12 90646332 90648527 - Elmsan1 protein_coding processed_transcript MGP_CBAJ_T0034995.1 MGP_CBAJ_G0019644.1 mouse_genomes_project 12 90649822 90653433 - Elmsan1 protein_coding processed_transcript MGP_CBAJ_T0006324.1 MGP_CBAJ_G0005264.1 mouse_genomes_project 12 54843090 54847779 - lincRNA lincRNA MGP_CBAJ_T0006325.1 MGP_CBAJ_G0005264.1 mouse_genomes_project 12 54844700 54847775 - lincRNA lincRNA MGP_CBAJ_T0006326.1 MGP_CBAJ_G0005264.1 mouse_genomes_project 12 54844718 54847776 - lincRNA lincRNA MGP_CBAJ_T0034635.1 MGP_CBAJ_G0019524.1 mouse_genomes_project 12 75540888 75623665 + MGP_CBAJ_P0034635 Frmd6 protein_coding protein_coding MGP_CBAJ_T0034636.1 MGP_CBAJ_G0019524.1 mouse_genomes_project 12 75583134 75618614 + MGP_CBAJ_P0034636 Frmd6 protein_coding unknown_likely_coding MGP_CBAJ_T0100032.1 MGP_CBAJ_G0038287.1 mouse_genomes_project 12 119871166 119871241 + AF357341 snoRNA snoRNA MGP_CBAJ_T0101573.1 MGP_CBAJ_G0039605.1 mouse_genomes_project 12 50764064 50764304 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0035293.1 MGP_CBAJ_G0019727.1 mouse_genomes_project 12 108160852 108330544 - MGP_CBAJ_P0035293 Efcab11 protein_coding protein_coding MGP_CBAJ_T0000824.1 MGP_CBAJ_G0000760.1 mouse_genomes_project 12 60465700 60470257 + TEC TEC MGP_CBAJ_T0101577.1 MGP_CBAJ_G0039608.1 mouse_genomes_project 12 112727060 112990325 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0034974.1 MGP_CBAJ_G0019635.1 mouse_genomes_project 12 90376331 90410139 - MGP_CBAJ_P0034974 Heatr4 protein_coding protein_coding MGP_CBAJ_T0012672.1 MGP_CBAJ_G0010784.1 mouse_genomes_project 12 99422981 99424160 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0035267.1 MGP_CBAJ_G0019721.1 mouse_genomes_project 12 106890147 106937948 + MGP_CBAJ_P0035267 Spata7 protein_coding protein_coding MGP_CBAJ_T0035268.1 MGP_CBAJ_G0019721.1 mouse_genomes_project 12 106890152 106900877 + Spata7 protein_coding retained_intron MGP_CBAJ_T0035269.1 MGP_CBAJ_G0019721.1 mouse_genomes_project 12 106890157 106937948 + MGP_CBAJ_P0035269 Spata7 protein_coding protein_coding MGP_CBAJ_T0035270.1 MGP_CBAJ_G0019721.1 mouse_genomes_project 12 106890180 106894787 + Spata7 protein_coding retained_intron MGP_CBAJ_T0035271.1 MGP_CBAJ_G0019721.1 mouse_genomes_project 12 106890187 106937945 + MGP_CBAJ_P0035271 Spata7 protein_coding protein_coding MGP_CBAJ_T0035272.1 MGP_CBAJ_G0019721.1 mouse_genomes_project 12 106932798 106937411 + Spata7 protein_coding retained_intron MGP_CBAJ_T0009679.1 MGP_CBAJ_G0007817.1 mouse_genomes_project 12 73883838 73883918 - miRNA miRNA MGP_CBAJ_T0034568.1 MGP_CBAJ_G0019499.1 mouse_genomes_project 12 73650981 73661315 + MGP_CBAJ_P0034568 Lrr1 protein_coding protein_coding MGP_CBAJ_T0000008.1 MGP_CBAJ_G0000006.1 mouse_genomes_project 12 123958065 123959714 - MGP_CBAJ_P0000008 Ighg2b IG_C_gene IG_C_gene MGP_CBAJ_T0034542.1 MGP_CBAJ_G0019490.1 mouse_genomes_project 12 68903960 68969942 + MGP_CBAJ_P0034542 Fam179b protein_coding protein_coding MGP_CBAJ_T0034543.1 MGP_CBAJ_G0019490.1 mouse_genomes_project 12 68904195 68969948 + MGP_CBAJ_P0034543 Fam179b protein_coding unknown_likely_coding MGP_CBAJ_T0034327.1 MGP_CBAJ_G0019410.1 mouse_genomes_project 12 36539122 36584709 + MGP_CBAJ_P0034327 Ankmy2 protein_coding protein_coding MGP_CBAJ_T0099987.1 MGP_CBAJ_G0038242.1 mouse_genomes_project 12 45016301 45016430 + Gm26326 snoRNA snoRNA MGP_CBAJ_T0099989.1 MGP_CBAJ_G0038244.1 mouse_genomes_project 12 47409029 47409236 + Gm24948 snoRNA snoRNA MGP_CBAJ_T0098775.1 MGP_CBAJ_G0037030.1 mouse_genomes_project 12 86625942 86626046 - Gm23817 snRNA snRNA MGP_CBAJ_T0097924.1 MGP_CBAJ_G0036197.1 mouse_genomes_project 12 55342425 55342544 - n-R5s58 rRNA rRNA MGP_CBAJ_T0035486.1 MGP_CBAJ_G0019803.1 mouse_genomes_project 12 115270745 115303722 + MGP_CBAJ_P0035486 Gskip protein_coding protein_coding MGP_CBAJ_T0035473.1 MGP_CBAJ_G0019798.1 mouse_genomes_project 12 114742852 114748840 - MGP_CBAJ_P0035473 Tcl1 protein_coding protein_coding MGP_CBAJ_T0035474.1 MGP_CBAJ_G0019798.1 mouse_genomes_project 12 114742860 114748819 - MGP_CBAJ_P0035474 Tcl1 protein_coding protein_coding MGP_CBAJ_T0035475.1 MGP_CBAJ_G0019798.1 mouse_genomes_project 12 114743410 114748809 - MGP_CBAJ_P0035475 Tcl1 protein_coding protein_coding MGP_CBAJ_T0035476.1 MGP_CBAJ_G0019798.1 mouse_genomes_project 12 114743600 114748896 - MGP_CBAJ_P0035476 Tcl1 protein_coding protein_coding MGP_CBAJ_T0035477.1 MGP_CBAJ_G0019798.1 mouse_genomes_project 12 114743696 114748799 - MGP_CBAJ_P0035477 Tcl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035478.1 MGP_CBAJ_G0019798.1 mouse_genomes_project 12 114744392 114748728 - Tcl1 protein_coding processed_transcript MGP_CBAJ_T0034275.1 MGP_CBAJ_G0019388.1 mouse_genomes_project 12 31868657 31973782 - MGP_CBAJ_P0034275 Prkar2b protein_coding protein_coding MGP_CBAJ_T0099991.1 MGP_CBAJ_G0038246.1 mouse_genomes_project 12 53161769 53161886 + Gm22088 snoRNA snoRNA MGP_CBAJ_T0035719.1 MGP_CBAJ_G0019877.1 mouse_genomes_project 12 123567613 123570062 + MGP_CBAJ_P0035719 Btbd6 protein_coding protein_coding MGP_CBAJ_T0035720.1 MGP_CBAJ_G0019877.1 mouse_genomes_project 12 123567694 123570062 + MGP_CBAJ_P0035720 Btbd6 protein_coding protein_coding MGP_CBAJ_T0035022.1 MGP_CBAJ_G0019649.1 mouse_genomes_project 12 90903883 90942706 - MGP_CBAJ_P0035022 Entpd5 protein_coding protein_coding MGP_CBAJ_T0035023.1 MGP_CBAJ_G0019649.1 mouse_genomes_project 12 90903883 90942706 - MGP_CBAJ_P0035023 Entpd5 protein_coding protein_coding MGP_CBAJ_T0035024.1 MGP_CBAJ_G0019649.1 mouse_genomes_project 12 90903901 90946261 - MGP_CBAJ_P0035024 Entpd5 protein_coding protein_coding MGP_CBAJ_T0035025.1 MGP_CBAJ_G0019649.1 mouse_genomes_project 12 90903904 90946246 - MGP_CBAJ_P0035025 Entpd5 protein_coding protein_coding MGP_CBAJ_T0035026.1 MGP_CBAJ_G0019649.1 mouse_genomes_project 12 90906703 90935564 - MGP_CBAJ_P0035026 Entpd5 protein_coding protein_coding MGP_CBAJ_T0035027.1 MGP_CBAJ_G0019649.1 mouse_genomes_project 12 90907035 90935515 - MGP_CBAJ_P0035027 Entpd5 protein_coding protein_coding MGP_CBAJ_T0035028.1 MGP_CBAJ_G0019649.1 mouse_genomes_project 12 90910383 90917681 - Entpd5 protein_coding retained_intron MGP_CBAJ_T0035029.1 MGP_CBAJ_G0019649.1 mouse_genomes_project 12 90938038 90946216 - Entpd5 protein_coding processed_transcript MGP_CBAJ_T0006409.1 MGP_CBAJ_G0005318.1 mouse_genomes_project 12 121673858 121676451 + A230087F16Rik lincRNA lincRNA MGP_CBAJ_T0006410.1 MGP_CBAJ_G0005318.1 mouse_genomes_project 12 121673880 121683023 + A230087F16Rik lincRNA lincRNA MGP_CBAJ_T0035084.1 MGP_CBAJ_G0019670.1 mouse_genomes_project 12 91865320 91900966 - MGP_CBAJ_P0035084 Mlh3 protein_coding protein_coding MGP_CBAJ_T0035085.1 MGP_CBAJ_G0019670.1 mouse_genomes_project 12 91865320 91900939 - MGP_CBAJ_P0035085 Mlh3 protein_coding protein_coding MGP_CBAJ_T0009701.1 MGP_CBAJ_G0007839.1 mouse_genomes_project 12 114415956 114416021 - Mir3069 miRNA miRNA MGP_CBAJ_T0012691.1 MGP_CBAJ_G0010803.1 mouse_genomes_project 12 124062947 124063304 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009774.1 MGP_CBAJ_G0007912.1 mouse_genomes_project 12 120510792 120510874 - Mir1247 miRNA miRNA MGP_CBAJ_T0034548.1 MGP_CBAJ_G0019493.1 mouse_genomes_project 12 69018488 69078895 + MGP_CBAJ_P0034548 Fancm protein_coding protein_coding MGP_CBAJ_T0034130.1 MGP_CBAJ_G0019337.1 mouse_genomes_project 12 16022534 16064910 - MGP_CBAJ_P0034130 Atp6v1c2 protein_coding protein_coding MGP_CBAJ_T0034131.1 MGP_CBAJ_G0019337.1 mouse_genomes_project 12 16022535 16064863 - MGP_CBAJ_P0034131 Atp6v1c2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034132.1 MGP_CBAJ_G0019337.1 mouse_genomes_project 12 16022535 16064901 - MGP_CBAJ_P0034132 Atp6v1c2 protein_coding protein_coding MGP_CBAJ_T0034133.1 MGP_CBAJ_G0019337.1 mouse_genomes_project 12 16022536 16046110 - MGP_CBAJ_P0034133 Atp6v1c2 protein_coding protein_coding MGP_CBAJ_T0034134.1 MGP_CBAJ_G0019337.1 mouse_genomes_project 12 16022672 16063664 - MGP_CBAJ_P0034134 Atp6v1c2 protein_coding unknown_likely_coding MGP_CBAJ_T0034135.1 MGP_CBAJ_G0019337.1 mouse_genomes_project 12 16035534 16069518 - MGP_CBAJ_P0034135 Atp6v1c2 protein_coding protein_coding MGP_CBAJ_T0034136.1 MGP_CBAJ_G0019337.1 mouse_genomes_project 12 16045997 16064928 - MGP_CBAJ_P0034136 Atp6v1c2 protein_coding protein_coding MGP_CBAJ_T0034137.1 MGP_CBAJ_G0019337.1 mouse_genomes_project 12 16046041 16069529 - MGP_CBAJ_P0034137 Atp6v1c2 protein_coding protein_coding MGP_CBAJ_T0034398.1 MGP_CBAJ_G0019432.1 mouse_genomes_project 12 48214531 48358948 - MGP_CBAJ_P0034398 Nova1 protein_coding protein_coding MGP_CBAJ_T0009719.1 MGP_CBAJ_G0007857.1 mouse_genomes_project 12 119779242 119779366 + Mir433 miRNA miRNA MGP_CBAJ_T0034671.1 MGP_CBAJ_G0019536.1 mouse_genomes_project 12 76941092 77045413 - MGP_CBAJ_P0034671 Ccdc175 protein_coding protein_coding MGP_CBAJ_T0034809.1 MGP_CBAJ_G0019584.1 mouse_genomes_project 12 84464381 84506504 + MGP_CBAJ_P0034809 Fam71d protein_coding protein_coding MGP_CBAJ_T0012690.1 MGP_CBAJ_G0010802.1 mouse_genomes_project 12 124062489 124062943 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017037.1 MGP_CBAJ_G0014967.1 mouse_genomes_project 12 33135121 33172582 - F730043M19Rik processed_transcript processed_transcript MGP_CBAJ_T0017038.1 MGP_CBAJ_G0014967.1 mouse_genomes_project 12 33149290 33171905 - F730043M19Rik processed_transcript processed_transcript MGP_CBAJ_T0017039.1 MGP_CBAJ_G0014967.1 mouse_genomes_project 12 33158250 33172582 - F730043M19Rik processed_transcript processed_transcript MGP_CBAJ_T0017040.1 MGP_CBAJ_G0014967.1 mouse_genomes_project 12 33159879 33172593 - F730043M19Rik processed_transcript processed_transcript MGP_CBAJ_T0017041.1 MGP_CBAJ_G0014967.1 mouse_genomes_project 12 33160613 33164818 - F730043M19Rik processed_transcript processed_transcript MGP_CBAJ_T0017042.1 MGP_CBAJ_G0014967.1 mouse_genomes_project 12 33172140 33172592 - F730043M19Rik processed_transcript processed_transcript MGP_CBAJ_T0035640.1 MGP_CBAJ_G0019848.1 mouse_genomes_project 12 122096393 122102906 + MGP_CBAJ_P0035640 Trmt61a protein_coding protein_coding MGP_CBAJ_T0035641.1 MGP_CBAJ_G0019848.1 mouse_genomes_project 12 122096393 122102906 + MGP_CBAJ_P0035641 Trmt61a protein_coding protein_coding MGP_CBAJ_T0006346.1 MGP_CBAJ_G0005280.1 mouse_genomes_project 12 92696503 92715686 - Gm26531 lincRNA lincRNA MGP_CBAJ_T0012699.1 MGP_CBAJ_G0010811.1 mouse_genomes_project 12 131895330 131895772 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0035464.1 MGP_CBAJ_G0019790.1 mouse_genomes_project 12 114116219 114228899 - MGP_CBAJ_P0035464 Clmn protein_coding protein_coding MGP_CBAJ_T0035465.1 MGP_CBAJ_G0019790.1 mouse_genomes_project 12 114116219 114228899 - MGP_CBAJ_P0035465 Clmn protein_coding protein_coding MGP_CBAJ_T0009694.1 MGP_CBAJ_G0007832.1 mouse_genomes_project 12 96686335 96686417 + Gm23989 miRNA miRNA MGP_CBAJ_T0009773.1 MGP_CBAJ_G0007911.1 mouse_genomes_project 12 119936987 119937070 + Mir3072 miRNA miRNA MGP_CBAJ_T0035687.1 MGP_CBAJ_G0019861.1 mouse_genomes_project 12 123038233 123048371 + MGP_CBAJ_P0035687 A530016L24Rik protein_coding protein_coding MGP_CBAJ_T0011202.1 MGP_CBAJ_G0009340.1 mouse_genomes_project 12 73886571 73886871 - Rn7s1 misc_RNA misc_RNA MGP_CBAJ_T0034503.1 MGP_CBAJ_G0019480.1 mouse_genomes_project 12 62155155 62178496 - MGP_CBAJ_P0034503 Trappc6b protein_coding protein_coding MGP_CBAJ_T0034504.1 MGP_CBAJ_G0019480.1 mouse_genomes_project 12 62156381 62178271 - MGP_CBAJ_P0034504 Trappc6b protein_coding unknown_likely_coding MGP_CBAJ_T0012670.1 MGP_CBAJ_G0010782.1 mouse_genomes_project 12 98896350 98897140 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101581.1 MGP_CBAJ_G0039612.1 mouse_genomes_project 12 112977059 112990325 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0011214.1 MGP_CBAJ_G0009352.1 mouse_genomes_project 12 119729752 119729849 + Gm27335 misc_RNA misc_RNA MGP_CBAJ_T0035525.1 MGP_CBAJ_G0019812.1 mouse_genomes_project 12 118327446 118364967 + MGP_CBAJ_P0035525 Hhipl1 protein_coding protein_coding MGP_CBAJ_T0000085.1 MGP_CBAJ_G0000064.1 mouse_genomes_project 12 125126545 125126974 - MGP_CBAJ_P0000085 Ighv9-4 IG_V_gene IG_V_gene MGP_CBAJ_T0000086.1 MGP_CBAJ_G0000064.1 mouse_genomes_project 12 125126545 125126839 - MGP_CBAJ_P0000086 Ighv9-4 IG_V_gene IG_V_gene MGP_CBAJ_T0009690.1 MGP_CBAJ_G0007828.1 mouse_genomes_project 12 93941267 93941367 + Gm25847 miRNA miRNA MGP_CBAJ_T0009686.1 MGP_CBAJ_G0007824.1 mouse_genomes_project 12 86366394 86366459 - Mir1843a miRNA miRNA MGP_CBAJ_T0034847.1 MGP_CBAJ_G0019605.1 mouse_genomes_project 12 86660894 86700225 + MGP_CBAJ_P0034847 Slc39a9 protein_coding protein_coding MGP_CBAJ_T0009682.1 MGP_CBAJ_G0007820.1 mouse_genomes_project 12 77380258 77380373 - Gm44392 miRNA miRNA MGP_CBAJ_T0035737.1 MGP_CBAJ_G0019883.1 mouse_genomes_project 12 123755719 123763216 + Crip1 protein_coding processed_transcript MGP_CBAJ_T0035738.1 MGP_CBAJ_G0019883.1 mouse_genomes_project 12 123758066 123763183 + MGP_CBAJ_P0035738 Crip1 protein_coding protein_coding MGP_CBAJ_T0035739.1 MGP_CBAJ_G0019883.1 mouse_genomes_project 12 123761363 123763214 + MGP_CBAJ_P0035739 Crip1 protein_coding protein_coding MGP_CBAJ_T0035740.1 MGP_CBAJ_G0019883.1 mouse_genomes_project 12 123761404 123763216 + MGP_CBAJ_P0035740 Crip1 protein_coding protein_coding MGP_CBAJ_T0035741.1 MGP_CBAJ_G0019883.1 mouse_genomes_project 12 123761422 123763216 + Crip1 protein_coding retained_intron MGP_CBAJ_T0035742.1 MGP_CBAJ_G0019883.1 mouse_genomes_project 12 123761432 123763216 + Crip1 protein_coding retained_intron MGP_CBAJ_T0012639.1 MGP_CBAJ_G0010751.1 mouse_genomes_project 12 51004919 51005930 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0035620.1 MGP_CBAJ_G0019840.1 mouse_genomes_project 12 121682006 121768748 - MGP_CBAJ_P0035620 Cdc42bpb protein_coding protein_coding MGP_CBAJ_T0035456.1 MGP_CBAJ_G0019784.1 mouse_genomes_project 12 113587961 113597062 + MGP_CBAJ_P0035456 Serpina3k protein_coding protein_coding MGP_CBAJ_T0101584.1 MGP_CBAJ_G0039615.1 mouse_genomes_project 12 113647065 113652593 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0000014.1 MGP_CBAJ_G0000010.1 mouse_genomes_project 12 124089147 124093310 - MGP_CBAJ_P0000014 Ighm IG_C_gene IG_C_gene MGP_CBAJ_T0000015.1 MGP_CBAJ_G0000010.1 mouse_genomes_project 12 124091320 124093310 - MGP_CBAJ_P0000015 Ighm IG_C_gene IG_C_gene MGP_CBAJ_T0035752.1 MGP_CBAJ_G0000010.1 mouse_genomes_project 12 124089145 124093236 - MGP_CBAJ_P0035752 Ighm IG_C_gene unknown_likely_coding MGP_CBAJ_T0034434.1 MGP_CBAJ_G0019452.1 mouse_genomes_project 12 57143405 57174265 - MGP_CBAJ_P0034434 Eapp protein_coding protein_coding MGP_CBAJ_T0034435.1 MGP_CBAJ_G0019452.1 mouse_genomes_project 12 57145469 57174302 - MGP_CBAJ_P0034435 Eapp protein_coding protein_coding MGP_CBAJ_T0034436.1 MGP_CBAJ_G0019452.1 mouse_genomes_project 12 57164315 57174324 - MGP_CBAJ_P0034436 Eapp protein_coding protein_coding MGP_CBAJ_T0034437.1 MGP_CBAJ_G0019452.1 mouse_genomes_project 12 57168509 57174343 - MGP_CBAJ_P0034437 Eapp protein_coding protein_coding MGP_CBAJ_T0035420.1 MGP_CBAJ_G0019767.1 mouse_genomes_project 12 112417112 112418626 - MGP_CBAJ_P0035420 Ifi27l2a protein_coding protein_coding MGP_CBAJ_T0034006.1 MGP_CBAJ_G0019289.1 mouse_genomes_project 12 1946222 1946747 - MGP_CBAJ_P0034006 Gm17541 protein_coding protein_coding MGP_CBAJ_T0006344.1 MGP_CBAJ_G0005278.1 mouse_genomes_project 12 90016450 90017415 + Gm26623 lincRNA lincRNA MGP_CBAJ_T0034660.1 MGP_CBAJ_G0019533.1 mouse_genomes_project 12 76903186 76904560 - MGP_CBAJ_P0034660 Gpr135 protein_coding protein_coding MGP_CBAJ_T0034638.1 MGP_CBAJ_G0019526.1 mouse_genomes_project 12 75718276 75738233 + Psma3 protein_coding retained_intron MGP_CBAJ_T0034639.1 MGP_CBAJ_G0019526.1 mouse_genomes_project 12 75718276 75738653 + MGP_CBAJ_P0034639 Psma3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034640.1 MGP_CBAJ_G0019526.1 mouse_genomes_project 12 75718352 75738127 + MGP_CBAJ_P0034640 Psma3 protein_coding protein_coding MGP_CBAJ_T0034641.1 MGP_CBAJ_G0019526.1 mouse_genomes_project 12 75718591 75738236 + MGP_CBAJ_P0034641 Psma3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034642.1 MGP_CBAJ_G0019526.1 mouse_genomes_project 12 75718606 75723294 + Psma3 protein_coding retained_intron MGP_CBAJ_T0034643.1 MGP_CBAJ_G0019526.1 mouse_genomes_project 12 75718613 75738207 + MGP_CBAJ_P0034643 Psma3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034644.1 MGP_CBAJ_G0019526.1 mouse_genomes_project 12 75718617 75728575 + Psma3 protein_coding retained_intron MGP_CBAJ_T0034645.1 MGP_CBAJ_G0019526.1 mouse_genomes_project 12 75730629 75738237 + MGP_CBAJ_P0034645 Psma3 protein_coding protein_coding MGP_CBAJ_T0034071.1 MGP_CBAJ_G0019311.1 mouse_genomes_project 12 6857634 6864032 + MGP_CBAJ_P0034071 Ttc32 protein_coding protein_coding MGP_CBAJ_T0034094.1 MGP_CBAJ_G0019327.1 mouse_genomes_project 12 14382291 14407367 - MGP_CBAJ_P0034094 Trib2 protein_coding protein_coding MGP_CBAJ_T0034095.1 MGP_CBAJ_G0019327.1 mouse_genomes_project 12 14406465 14407459 - Trib2 protein_coding processed_transcript MGP_CBAJ_T0006365.1 MGP_CBAJ_G0005298.1 mouse_genomes_project 12 116199646 116207255 - 1700121N20Rik lincRNA lincRNA MGP_CBAJ_T0035522.1 MGP_CBAJ_G0019810.1 mouse_genomes_project 12 118159852 118186877 + MGP_CBAJ_P0035522 Ccnk protein_coding unknown_likely_coding MGP_CBAJ_T0035523.1 MGP_CBAJ_G0019810.1 mouse_genomes_project 12 118160096 118193897 + MGP_CBAJ_P0035523 Ccnk protein_coding protein_coding MGP_CBAJ_T0035558.1 MGP_CBAJ_G0019823.1 mouse_genomes_project 12 119633509 119634469 + Dlk1 protein_coding retained_intron MGP_CBAJ_T0035559.1 MGP_CBAJ_G0019823.1 mouse_genomes_project 12 119633535 119644022 + MGP_CBAJ_P0035559 Dlk1 protein_coding protein_coding MGP_CBAJ_T0035560.1 MGP_CBAJ_G0019823.1 mouse_genomes_project 12 119634141 119641386 + MGP_CBAJ_P0035560 Dlk1 protein_coding protein_coding MGP_CBAJ_T0035561.1 MGP_CBAJ_G0019823.1 mouse_genomes_project 12 119634177 119641067 + MGP_CBAJ_P0035561 Dlk1 protein_coding protein_coding MGP_CBAJ_T0035562.1 MGP_CBAJ_G0019823.1 mouse_genomes_project 12 119634177 119641304 + MGP_CBAJ_P0035562 Dlk1 protein_coding protein_coding MGP_CBAJ_T0035563.1 MGP_CBAJ_G0019823.1 mouse_genomes_project 12 119634221 119644022 + MGP_CBAJ_P0035563 Dlk1 protein_coding protein_coding MGP_CBAJ_T0035564.1 MGP_CBAJ_G0019823.1 mouse_genomes_project 12 119634341 119644022 + MGP_CBAJ_P0035564 Dlk1 protein_coding protein_coding MGP_CBAJ_T0035565.1 MGP_CBAJ_G0019823.1 mouse_genomes_project 12 119634346 119641046 + MGP_CBAJ_P0035565 Dlk1 protein_coding protein_coding MGP_CBAJ_T0035566.1 MGP_CBAJ_G0019823.1 mouse_genomes_project 12 119634882 119640448 + MGP_CBAJ_P0035566 Dlk1 protein_coding protein_coding MGP_CBAJ_T0035567.1 MGP_CBAJ_G0019823.1 mouse_genomes_project 12 119640528 119641161 + MGP_CBAJ_P0035567 Dlk1 protein_coding protein_coding MGP_CBAJ_T0009764.1 MGP_CBAJ_G0007902.1 mouse_genomes_project 12 119927732 119927798 + Mir154 miRNA miRNA MGP_CBAJ_T0034281.1 MGP_CBAJ_G0019391.1 mouse_genomes_project 12 32803192 32837400 + MGP_CBAJ_P0034281 Nampt protein_coding protein_coding MGP_CBAJ_T0034455.1 MGP_CBAJ_G0019460.1 mouse_genomes_project 12 57919376 58016050 + MGP_CBAJ_P0034455 protein_coding protein_coding MGP_CBAJ_T0034834.1 MGP_CBAJ_G0019597.1 mouse_genomes_project 12 85054423 85120396 - MGP_CBAJ_P0034834 Zfyve26 protein_coding protein_coding MGP_CBAJ_T0034261.1 MGP_CBAJ_G0019386.1 mouse_genomes_project 12 31593836 31600898 - MGP_CBAJ_P0034261 Gpr22 protein_coding protein_coding MGP_CBAJ_T0034262.1 MGP_CBAJ_G0019386.1 mouse_genomes_project 12 31595681 31600919 - MGP_CBAJ_P0034262 Gpr22 protein_coding protein_coding MGP_CBAJ_T0034263.1 MGP_CBAJ_G0019386.1 mouse_genomes_project 12 31596418 31600905 - MGP_CBAJ_P0034263 Gpr22 protein_coding protein_coding MGP_CBAJ_T0035225.1 MGP_CBAJ_G0019711.1 mouse_genomes_project 12 98121530 98135460 - MGP_CBAJ_P0035225 Dio2 protein_coding protein_coding MGP_CBAJ_T0000102.1 MGP_CBAJ_G0000078.1 mouse_genomes_project 12 125435672 125436143 - MGP_CBAJ_P0000102 Ighv1-7 IG_V_gene IG_V_gene MGP_CBAJ_T0034819.1 MGP_CBAJ_G0019591.1 mouse_genomes_project 12 84842101 84898552 + MGP_CBAJ_P0034819 Plekhh1 protein_coding protein_coding MGP_CBAJ_T0034192.1 MGP_CBAJ_G0019359.1 mouse_genomes_project 12 28143675 28150185 - protein_coding processed_transcript MGP_CBAJ_T0034193.1 MGP_CBAJ_G0019359.1 mouse_genomes_project 12 28149526 28158081 - protein_coding processed_transcript MGP_CBAJ_T0034194.1 MGP_CBAJ_G0019359.1 mouse_genomes_project 12 28149754 28195480 - MGP_CBAJ_P0034194 protein_coding protein_coding MGP_CBAJ_T0006377.1 MGP_CBAJ_G0005307.1 mouse_genomes_project 12 117658424 117670099 - 4930465M20Rik lincRNA lincRNA MGP_CBAJ_T0006378.1 MGP_CBAJ_G0005307.1 mouse_genomes_project 12 117664025 117670107 - 4930465M20Rik lincRNA lincRNA MGP_CBAJ_T0035471.1 MGP_CBAJ_G0019796.1 mouse_genomes_project 12 114659270 114663990 + MGP_CBAJ_P0035471 Tcl1b5 protein_coding protein_coding MGP_CBAJ_T0034586.1 MGP_CBAJ_G0019509.1 mouse_genomes_project 12 73900281 73904112 + MGP_CBAJ_P0034586 Arf6 protein_coding protein_coding MGP_CBAJ_T0034813.1 MGP_CBAJ_G0019588.1 mouse_genomes_project 12 84671808 84694029 - MGP_CBAJ_P0034813 Plek2 protein_coding protein_coding MGP_CBAJ_T0098768.1 MGP_CBAJ_G0037023.1 mouse_genomes_project 12 74619461 74619564 - Gm23579 snRNA snRNA MGP_CBAJ_T0035005.1 MGP_CBAJ_G0019646.1 mouse_genomes_project 12 90835188 90872046 + MGP_CBAJ_P0035005 Zfp410 protein_coding protein_coding MGP_CBAJ_T0035006.1 MGP_CBAJ_G0019646.1 mouse_genomes_project 12 90835455 90868445 + MGP_CBAJ_P0035006 Zfp410 protein_coding unknown_likely_coding MGP_CBAJ_T0012684.1 MGP_CBAJ_G0010796.1 mouse_genomes_project 12 116325448 116326960 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009717.1 MGP_CBAJ_G0007855.1 mouse_genomes_project 12 119776190 119776279 + Mir3070b miRNA miRNA MGP_CBAJ_T0100023.1 MGP_CBAJ_G0038278.1 mouse_genomes_project 12 119841070 119841143 + DQ267101 snoRNA snoRNA MGP_CBAJ_T0035306.1 MGP_CBAJ_G0019731.1 mouse_genomes_project 12 108613277 108649077 - MGP_CBAJ_P0035306 Nrde2 protein_coding protein_coding MGP_CBAJ_T0000004.1 MGP_CBAJ_G0000003.1 mouse_genomes_project 12 123884808 123890202 - MGP_CBAJ_P0000004 Igha IG_C_gene IG_C_gene MGP_CBAJ_T0000005.1 MGP_CBAJ_G0000003.1 mouse_genomes_project 12 123888667 123890202 - MGP_CBAJ_P0000005 Igha IG_C_gene IG_C_gene MGP_CBAJ_T0012659.1 MGP_CBAJ_G0010771.1 mouse_genomes_project 12 79567040 79570894 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0034690.1 MGP_CBAJ_G0019543.1 mouse_genomes_project 12 77844057 77893835 - MGP_CBAJ_P0034690 protein_coding protein_coding MGP_CBAJ_T0034691.1 MGP_CBAJ_G0019543.1 mouse_genomes_project 12 77844057 77893689 - MGP_CBAJ_P0034691 protein_coding protein_coding MGP_CBAJ_T0034692.1 MGP_CBAJ_G0019543.1 mouse_genomes_project 12 77861839 77879911 - MGP_CBAJ_P0034692 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034693.1 MGP_CBAJ_G0019543.1 mouse_genomes_project 12 77861893 77880107 - protein_coding retained_intron MGP_CBAJ_T0034694.1 MGP_CBAJ_G0019543.1 mouse_genomes_project 12 77861947 77879905 - protein_coding processed_transcript MGP_CBAJ_T0034695.1 MGP_CBAJ_G0019543.1 mouse_genomes_project 12 77879867 77893786 - MGP_CBAJ_P0034695 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034696.1 MGP_CBAJ_G0019543.1 mouse_genomes_project 12 77887558 77919032 - MGP_CBAJ_P0034696 protein_coding protein_coding MGP_CBAJ_T0034697.1 MGP_CBAJ_G0019543.1 mouse_genomes_project 12 77889086 77914811 - MGP_CBAJ_P0034697 protein_coding protein_coding MGP_CBAJ_T0034698.1 MGP_CBAJ_G0019543.1 mouse_genomes_project 12 77889090 77918341 - MGP_CBAJ_P0034698 protein_coding protein_coding MGP_CBAJ_T0012655.1 MGP_CBAJ_G0010767.1 mouse_genomes_project 12 73611799 73612436 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0035542.1 MGP_CBAJ_G0019818.1 mouse_genomes_project 12 118966164 118976176 - MGP_CBAJ_P0035542 Slc25a29 protein_coding protein_coding MGP_CBAJ_T0035543.1 MGP_CBAJ_G0019818.1 mouse_genomes_project 12 118967529 118971927 - Slc25a29 protein_coding retained_intron MGP_CBAJ_T0035544.1 MGP_CBAJ_G0019818.1 mouse_genomes_project 12 118971252 118976113 - Slc25a29 protein_coding retained_intron MGP_CBAJ_T0006413.1 MGP_CBAJ_G0005321.1 mouse_genomes_project 12 123534822 123538990 - Gm26583 lincRNA lincRNA MGP_CBAJ_T0006349.1 MGP_CBAJ_G0005283.1 mouse_genomes_project 12 93769601 93770764 - Gm26698 lincRNA lincRNA MGP_CBAJ_T0034729.1 MGP_CBAJ_G0019557.1 mouse_genomes_project 12 79533594 79536638 - MGP_CBAJ_P0034729 Gm11042 protein_coding protein_coding MGP_CBAJ_T0034058.1 MGP_CBAJ_G0019307.1 mouse_genomes_project 12 6554005 6576389 + MGP_CBAJ_P0034058 Sdc1 protein_coding protein_coding MGP_CBAJ_T0034059.1 MGP_CBAJ_G0019307.1 mouse_genomes_project 12 6554006 6572557 + Sdc1 protein_coding retained_intron MGP_CBAJ_T0034060.1 MGP_CBAJ_G0019307.1 mouse_genomes_project 12 6554095 6575736 + MGP_CBAJ_P0034060 Sdc1 protein_coding protein_coding MGP_CBAJ_T0034061.1 MGP_CBAJ_G0019307.1 mouse_genomes_project 12 6554485 6573122 + Sdc1 protein_coding processed_transcript MGP_CBAJ_T0033983.1 MGP_CBAJ_G0019280.1 mouse_genomes_project 12 1067834 1073515 + MGP_CBAJ_P0033983 Pomc protein_coding protein_coding MGP_CBAJ_T0034180.1 MGP_CBAJ_G0019352.1 mouse_genomes_project 12 23953585 24095477 + MGP_CBAJ_P0034180 Mboat2 protein_coding protein_coding MGP_CBAJ_T0034181.1 MGP_CBAJ_G0019352.1 mouse_genomes_project 12 23953585 24095477 + MGP_CBAJ_P0034181 Mboat2 protein_coding protein_coding MGP_CBAJ_T0033985.1 MGP_CBAJ_G0019282.1 mouse_genomes_project 12 1211263 1242233 + MGP_CBAJ_P0033985 Dnajc27 protein_coding protein_coding MGP_CBAJ_T0033986.1 MGP_CBAJ_G0019282.1 mouse_genomes_project 12 1211318 1239996 + MGP_CBAJ_P0033986 Dnajc27 protein_coding protein_coding MGP_CBAJ_T0000011.1 MGP_CBAJ_G0000008.1 mouse_genomes_project 12 124022602 124024260 - MGP_CBAJ_P0000011 Ighg3 IG_C_gene IG_C_gene MGP_CBAJ_T0017077.1 MGP_CBAJ_G0014981.1 mouse_genomes_project 12 122159288 122160031 + Gm15995 processed_transcript processed_transcript MGP_CBAJ_T0034539.1 MGP_CBAJ_G0019487.1 mouse_genomes_project 12 68331606 68335208 - MGP_CBAJ_P0034539 Fscb protein_coding protein_coding MGP_CBAJ_T0034114.1 MGP_CBAJ_G0019333.1 mouse_genomes_project 12 15682145 15696019 - Pqlc3 protein_coding retained_intron MGP_CBAJ_T0034115.1 MGP_CBAJ_G0019333.1 mouse_genomes_project 12 15682145 15696105 - MGP_CBAJ_P0034115 Pqlc3 protein_coding protein_coding MGP_CBAJ_T0034116.1 MGP_CBAJ_G0019333.1 mouse_genomes_project 12 15688945 15696012 - MGP_CBAJ_P0034116 Pqlc3 protein_coding protein_coding MGP_CBAJ_T0034117.1 MGP_CBAJ_G0019333.1 mouse_genomes_project 12 15689494 15696013 - Pqlc3 protein_coding processed_transcript MGP_CBAJ_T0034118.1 MGP_CBAJ_G0019333.1 mouse_genomes_project 12 15689639 15696103 - MGP_CBAJ_P0034118 Pqlc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034119.1 MGP_CBAJ_G0019333.1 mouse_genomes_project 12 15691626 15696395 - Pqlc3 protein_coding processed_transcript MGP_CBAJ_T0034120.1 MGP_CBAJ_G0019333.1 mouse_genomes_project 12 15691626 15696395 - Pqlc3 protein_coding processed_transcript MGP_CBAJ_T0099985.1 MGP_CBAJ_G0038240.1 mouse_genomes_project 12 40447049 40447181 + Gm24434 snoRNA snoRNA MGP_CBAJ_T0034195.1 MGP_CBAJ_G0019360.1 mouse_genomes_project 12 28196801 28225253 - MGP_CBAJ_P0034195 Allc protein_coding protein_coding MGP_CBAJ_T0034196.1 MGP_CBAJ_G0019360.1 mouse_genomes_project 12 28196801 28225261 - MGP_CBAJ_P0034196 Allc protein_coding protein_coding MGP_CBAJ_T0034454.1 MGP_CBAJ_G0019459.1 mouse_genomes_project 12 57883512 57906450 + MGP_CBAJ_P0034454 protein_coding protein_coding MGP_CBAJ_T0000090.1 MGP_CBAJ_G0000067.1 mouse_genomes_project 12 125189672 125190106 - MGP_CBAJ_P0000090 Ighv12-3 IG_V_gene IG_V_gene MGP_CBAJ_T0006364.1 MGP_CBAJ_G0005297.1 mouse_genomes_project 12 116069334 116072880 + Gm17032 lincRNA lincRNA MGP_CBAJ_T0035783.1 MGP_CBAJ_G0019898.1 mouse_genomes_project 12 130578574 130584835 + MGP_CBAJ_P0035783 Sp8 protein_coding protein_coding MGP_CBAJ_T0098741.1 MGP_CBAJ_G0036996.1 mouse_genomes_project 12 7802673 7802777 - Gm22845 snRNA snRNA MGP_CBAJ_T0034145.1 MGP_CBAJ_G0019342.1 mouse_genomes_project 12 20252448 20272230 - MGP_CBAJ_P0034145 Itgb1bp1 protein_coding protein_coding MGP_CBAJ_T0034146.1 MGP_CBAJ_G0019342.1 mouse_genomes_project 12 20252735 20272090 - MGP_CBAJ_P0034146 Itgb1bp1 protein_coding protein_coding MGP_CBAJ_T0034147.1 MGP_CBAJ_G0019342.1 mouse_genomes_project 12 20253346 20254768 - MGP_CBAJ_P0034147 Itgb1bp1 protein_coding protein_coding MGP_CBAJ_T0034148.1 MGP_CBAJ_G0019342.1 mouse_genomes_project 12 20253932 20272178 - MGP_CBAJ_P0034148 Itgb1bp1 protein_coding protein_coding MGP_CBAJ_T0034149.1 MGP_CBAJ_G0019342.1 mouse_genomes_project 12 20254070 20255415 - Itgb1bp1 protein_coding retained_intron MGP_CBAJ_T0034704.1 MGP_CBAJ_G0019546.1 mouse_genomes_project 12 78107706 78121745 - MGP_CBAJ_P0034704 Six4 protein_coding protein_coding MGP_CBAJ_T0034705.1 MGP_CBAJ_G0019546.1 mouse_genomes_project 12 78111536 78121776 - MGP_CBAJ_P0034705 Six4 protein_coding protein_coding MGP_CBAJ_T0034801.1 MGP_CBAJ_G0019581.1 mouse_genomes_project 12 82860319 83123533 + MGP_CBAJ_P0034801 Fut8 protein_coding protein_coding MGP_CBAJ_T0034802.1 MGP_CBAJ_G0019581.1 mouse_genomes_project 12 82860319 83123533 + MGP_CBAJ_P0034802 Fut8 protein_coding protein_coding MGP_CBAJ_T0034803.1 MGP_CBAJ_G0019581.1 mouse_genomes_project 12 82861280 83123875 + MGP_CBAJ_P0034803 Fut8 protein_coding protein_coding MGP_CBAJ_T0099975.1 MGP_CBAJ_G0038230.1 mouse_genomes_project 12 20273919 20274053 + Gm25821 snoRNA snoRNA MGP_CBAJ_T0035601.1 MGP_CBAJ_G0019832.1 mouse_genomes_project 12 121193380 121220076 + MGP_CBAJ_P0035601 Zfp839 protein_coding protein_coding MGP_CBAJ_T0035351.1 MGP_CBAJ_G0019745.1 mouse_genomes_project 12 110945261 111104877 + MGP_CBAJ_P0035351 Slc24a4 protein_coding protein_coding MGP_CBAJ_T0035352.1 MGP_CBAJ_G0019745.1 mouse_genomes_project 12 110945702 111104535 + MGP_CBAJ_P0035352 Slc24a4 protein_coding protein_coding MGP_CBAJ_T0035353.1 MGP_CBAJ_G0019745.1 mouse_genomes_project 12 110945918 111104283 + MGP_CBAJ_P0035353 Slc24a4 protein_coding protein_coding MGP_CBAJ_T0035136.1 MGP_CBAJ_G0019685.1 mouse_genomes_project 12 93514725 93528004 + MGP_CBAJ_P0035136 Vash1 protein_coding protein_coding MGP_CBAJ_T0006304.1 MGP_CBAJ_G0005249.1 mouse_genomes_project 12 11217504 11222027 + 4930519A11Rik lincRNA lincRNA MGP_CBAJ_T0099982.1 MGP_CBAJ_G0038237.1 mouse_genomes_project 12 35081518 35081650 + Gm24429 snoRNA snoRNA MGP_CBAJ_T0035263.1 MGP_CBAJ_G0019718.1 mouse_genomes_project 12 106404001 106471998 - MGP_CBAJ_P0035263 Galc protein_coding unknown_likely_coding MGP_CBAJ_T0035264.1 MGP_CBAJ_G0019718.1 mouse_genomes_project 12 106404008 106472176 - MGP_CBAJ_P0035264 Galc protein_coding protein_coding MGP_CBAJ_T0097930.1 MGP_CBAJ_G0036203.1 mouse_genomes_project 12 88799643 88799746 - n-R5s63 rRNA rRNA MGP_CBAJ_T0000111.1 MGP_CBAJ_G0000083.1 mouse_genomes_project 12 125572094 125572528 - MGP_CBAJ_P0000111 Ighv1-23 IG_V_gene IG_V_gene MGP_CBAJ_T0012686.1 MGP_CBAJ_G0010798.1 mouse_genomes_project 12 117069923 117071038 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000070.1 MGP_CBAJ_G0000055.1 mouse_genomes_project 12 124832349 124832827 - MGP_CBAJ_P0000070 IG_V_gene IG_V_gene MGP_CBAJ_T0006352.1 MGP_CBAJ_G0005286.1 mouse_genomes_project 12 98135222 98147499 + Gm26512 lincRNA lincRNA MGP_CBAJ_T0097935.1 MGP_CBAJ_G0036208.1 mouse_genomes_project 12 129172557 129172663 + Gm24741 rRNA rRNA MGP_CBAJ_T0012636.1 MGP_CBAJ_G0010748.1 mouse_genomes_project 12 30503454 30503832 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0034190.1 MGP_CBAJ_G0019357.1 mouse_genomes_project 12 25778304 25791736 + MGP_CBAJ_P0034190 Cmpk2 protein_coding protein_coding MGP_CBAJ_T0009727.1 MGP_CBAJ_G0007865.1 mouse_genomes_project 12 119805502 119805589 + Gm23912 miRNA miRNA MGP_CBAJ_T0035042.1 MGP_CBAJ_G0019657.1 mouse_genomes_project 12 91262689 91284203 - MGP_CBAJ_P0035042 Syndig1l protein_coding protein_coding MGP_CBAJ_T0035686.1 MGP_CBAJ_G0019860.1 mouse_genomes_project 12 122951610 122966770 - MGP_CBAJ_P0035686 A730018C14Rik protein_coding protein_coding MGP_CBAJ_T0034289.1 MGP_CBAJ_G0019394.1 mouse_genomes_project 12 33172688 33279307 + MGP_CBAJ_P0034289 Atxn7l1 protein_coding protein_coding MGP_CBAJ_T0034290.1 MGP_CBAJ_G0019394.1 mouse_genomes_project 12 33172706 33279307 + MGP_CBAJ_P0034290 Atxn7l1 protein_coding protein_coding MGP_CBAJ_T0034291.1 MGP_CBAJ_G0019394.1 mouse_genomes_project 12 33172749 33413979 + MGP_CBAJ_P0034291 Atxn7l1 protein_coding protein_coding MGP_CBAJ_T0034292.1 MGP_CBAJ_G0019394.1 mouse_genomes_project 12 33172758 33416453 + MGP_CBAJ_P0034292 Atxn7l1 protein_coding protein_coding MGP_CBAJ_T0034293.1 MGP_CBAJ_G0019394.1 mouse_genomes_project 12 33172769 33363472 + MGP_CBAJ_P0034293 Atxn7l1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034294.1 MGP_CBAJ_G0019394.1 mouse_genomes_project 12 33172800 33366188 + Atxn7l1 protein_coding retained_intron MGP_CBAJ_T0034295.1 MGP_CBAJ_G0019394.1 mouse_genomes_project 12 33335711 33409062 + MGP_CBAJ_P0034295 Atxn7l1 protein_coding protein_coding MGP_CBAJ_T0034296.1 MGP_CBAJ_G0019394.1 mouse_genomes_project 12 33351635 33382273 + MGP_CBAJ_P0034296 Atxn7l1 protein_coding protein_coding MGP_CBAJ_T0034297.1 MGP_CBAJ_G0019394.1 mouse_genomes_project 12 33351647 33366188 + Atxn7l1 protein_coding retained_intron MGP_CBAJ_T0034298.1 MGP_CBAJ_G0019394.1 mouse_genomes_project 12 33351758 33363402 + MGP_CBAJ_P0034298 Atxn7l1 protein_coding protein_coding MGP_CBAJ_T0034299.1 MGP_CBAJ_G0019394.1 mouse_genomes_project 12 33352755 33413146 + MGP_CBAJ_P0034299 Atxn7l1 protein_coding protein_coding MGP_CBAJ_T0034300.1 MGP_CBAJ_G0019394.1 mouse_genomes_project 12 33352763 33363543 + Atxn7l1 protein_coding retained_intron MGP_CBAJ_T0034301.1 MGP_CBAJ_G0019394.1 mouse_genomes_project 12 33382637 33409067 + Atxn7l1 protein_coding retained_intron MGP_CBAJ_T0034302.1 MGP_CBAJ_G0019394.1 mouse_genomes_project 12 33408113 33413968 + MGP_CBAJ_P0034302 Atxn7l1 protein_coding protein_coding MGP_CBAJ_T0003344.1 MGP_CBAJ_G0003073.1 mouse_genomes_project 12 107696063 107716623 + 3300002A11Rik antisense antisense MGP_CBAJ_T0003345.1 MGP_CBAJ_G0003073.1 mouse_genomes_project 12 107701302 107716623 + 3300002A11Rik antisense antisense MGP_CBAJ_T0098779.1 MGP_CBAJ_G0037034.1 mouse_genomes_project 12 103258783 103258890 - Gm26055 snRNA snRNA MGP_CBAJ_T0012685.1 MGP_CBAJ_G0010797.1 mouse_genomes_project 12 116710333 116710814 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0034580.1 MGP_CBAJ_G0019506.1 mouse_genomes_project 12 73802125 73809355 + Klhdc2 protein_coding retained_intron MGP_CBAJ_T0034581.1 MGP_CBAJ_G0019506.1 mouse_genomes_project 12 73802166 73825078 + MGP_CBAJ_P0034581 Klhdc2 protein_coding protein_coding MGP_CBAJ_T0034582.1 MGP_CBAJ_G0019506.1 mouse_genomes_project 12 73802199 73819796 + Klhdc2 protein_coding retained_intron MGP_CBAJ_T0034583.1 MGP_CBAJ_G0019506.1 mouse_genomes_project 12 73810633 73819824 + Klhdc2 protein_coding retained_intron MGP_CBAJ_T0034256.1 MGP_CBAJ_G0019382.1 mouse_genomes_project 12 31357493 31410618 - MGP_CBAJ_P0034256 Slc26a4 protein_coding protein_coding MGP_CBAJ_T0035261.1 MGP_CBAJ_G0019717.1 mouse_genomes_project 12 103628704 103730307 + MGP_CBAJ_P0035261 Flrt2 protein_coding protein_coding MGP_CBAJ_T0035262.1 MGP_CBAJ_G0019717.1 mouse_genomes_project 12 103631831 103726199 + MGP_CBAJ_P0035262 Flrt2 protein_coding protein_coding MGP_CBAJ_T0034854.1 MGP_CBAJ_G0019609.1 mouse_genomes_project 12 86999785 87010867 + MGP_CBAJ_P0034854 Srsf5 protein_coding protein_coding MGP_CBAJ_T0034855.1 MGP_CBAJ_G0019609.1 mouse_genomes_project 12 86999801 87010863 + Srsf5 protein_coding retained_intron MGP_CBAJ_T0034856.1 MGP_CBAJ_G0019609.1 mouse_genomes_project 12 86999801 87010863 + MGP_CBAJ_P0034856 Srsf5 protein_coding protein_coding MGP_CBAJ_T0034857.1 MGP_CBAJ_G0019609.1 mouse_genomes_project 12 86999813 87010863 + Srsf5 protein_coding retained_intron MGP_CBAJ_T0034858.1 MGP_CBAJ_G0019609.1 mouse_genomes_project 12 86999813 87010863 + MGP_CBAJ_P0034858 Srsf5 protein_coding protein_coding MGP_CBAJ_T0034859.1 MGP_CBAJ_G0019609.1 mouse_genomes_project 12 86999813 87010863 + MGP_CBAJ_P0034859 Srsf5 protein_coding protein_coding MGP_CBAJ_T0034860.1 MGP_CBAJ_G0019609.1 mouse_genomes_project 12 86999815 87001130 + Srsf5 protein_coding processed_transcript MGP_CBAJ_T0034861.1 MGP_CBAJ_G0019609.1 mouse_genomes_project 12 86999829 87002787 + Srsf5 protein_coding processed_transcript MGP_CBAJ_T0034862.1 MGP_CBAJ_G0019609.1 mouse_genomes_project 12 86999851 87001811 + MGP_CBAJ_P0034862 Srsf5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034863.1 MGP_CBAJ_G0019609.1 mouse_genomes_project 12 86999860 87001253 + Srsf5 protein_coding processed_transcript MGP_CBAJ_T0034864.1 MGP_CBAJ_G0019609.1 mouse_genomes_project 12 86999866 87010863 + MGP_CBAJ_P0034864 Srsf5 protein_coding protein_coding MGP_CBAJ_T0034865.1 MGP_CBAJ_G0019609.1 mouse_genomes_project 12 87000657 87010857 + Srsf5 protein_coding retained_intron MGP_CBAJ_T0006316.1 MGP_CBAJ_G0005258.1 mouse_genomes_project 12 32909612 32950948 - 4933406C10Rik lincRNA lincRNA MGP_CBAJ_T0006317.1 MGP_CBAJ_G0005258.1 mouse_genomes_project 12 32915178 32950942 - 4933406C10Rik lincRNA lincRNA MGP_CBAJ_T0035589.1 MGP_CBAJ_G0019830.1 mouse_genomes_project 12 121065464 121135799 + MGP_CBAJ_P0035589 Wdr20 protein_coding protein_coding MGP_CBAJ_T0035590.1 MGP_CBAJ_G0019830.1 mouse_genomes_project 12 121065500 121122643 + MGP_CBAJ_P0035590 Wdr20 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035591.1 MGP_CBAJ_G0019830.1 mouse_genomes_project 12 121065509 121067761 + Wdr20 protein_coding retained_intron MGP_CBAJ_T0035592.1 MGP_CBAJ_G0019830.1 mouse_genomes_project 12 121065512 121126577 + MGP_CBAJ_P0035592 Wdr20 protein_coding protein_coding MGP_CBAJ_T0035593.1 MGP_CBAJ_G0019830.1 mouse_genomes_project 12 121065538 121070158 + Wdr20 protein_coding processed_transcript MGP_CBAJ_T0035594.1 MGP_CBAJ_G0019830.1 mouse_genomes_project 12 121065729 121122815 + MGP_CBAJ_P0035594 Wdr20 protein_coding protein_coding MGP_CBAJ_T0035595.1 MGP_CBAJ_G0019830.1 mouse_genomes_project 12 121124711 121135590 + Wdr20 protein_coding processed_transcript MGP_CBAJ_T0011212.1 MGP_CBAJ_G0009350.1 mouse_genomes_project 12 119717656 119717861 + Gm27528 misc_RNA misc_RNA MGP_CBAJ_T0035545.1 MGP_CBAJ_G0019819.1 mouse_genomes_project 12 118991660 118997358 + MGP_CBAJ_P0035545 Slc25a47 protein_coding protein_coding MGP_CBAJ_T0035161.1 MGP_CBAJ_G0019692.1 mouse_genomes_project 12 94005667 94012291 - MGP_CBAJ_P0035161 Ngb protein_coding protein_coding MGP_CBAJ_T0035162.1 MGP_CBAJ_G0019692.1 mouse_genomes_project 12 94005667 94012274 - MGP_CBAJ_P0035162 Ngb protein_coding protein_coding MGP_CBAJ_T0035163.1 MGP_CBAJ_G0019692.1 mouse_genomes_project 12 94006161 94012102 - MGP_CBAJ_P0035163 Ngb protein_coding protein_coding MGP_CBAJ_T0034878.1 MGP_CBAJ_G0019615.1 mouse_genomes_project 12 87469634 87477381 - MGP_CBAJ_P0034878 protein_coding protein_coding MGP_CBAJ_T0003313.1 MGP_CBAJ_G0003046.1 mouse_genomes_project 12 29791804 29794269 + Gm15691 antisense antisense MGP_CBAJ_T0034072.1 MGP_CBAJ_G0019312.1 mouse_genomes_project 12 7471164 7478220 + MGP_CBAJ_P0034072 Osr1 protein_coding protein_coding MGP_CBAJ_T0034866.1 MGP_CBAJ_G0019610.1 mouse_genomes_project 12 87013544 87028228 - MGP_CBAJ_P0034866 Slc10a1 protein_coding protein_coding MGP_CBAJ_T0099996.1 MGP_CBAJ_G0038251.1 mouse_genomes_project 12 62862878 62863009 + Gm22673 snoRNA snoRNA MGP_CBAJ_T0099981.1 MGP_CBAJ_G0038236.1 mouse_genomes_project 12 33498824 33498956 - Gm23529 snoRNA snoRNA MGP_CBAJ_T0098765.1 MGP_CBAJ_G0037020.1 mouse_genomes_project 12 71903361 71903547 + Gm26256 snRNA snRNA MGP_CBAJ_T0000821.1 MGP_CBAJ_G0000757.1 mouse_genomes_project 12 24788823 24829401 - TEC TEC MGP_CBAJ_T0034062.1 MGP_CBAJ_G0019308.1 mouse_genomes_project 12 6733224 6752876 + MGP_CBAJ_P0034062 Laptm4a protein_coding protein_coding MGP_CBAJ_T0034783.1 MGP_CBAJ_G0019577.1 mouse_genomes_project 12 82311338 82492544 + MGP_CBAJ_P0034783 Fntb protein_coding nonsense_mediated_decay MGP_CBAJ_T0034784.1 MGP_CBAJ_G0019577.1 mouse_genomes_project 12 82311347 82492061 + MGP_CBAJ_P0034784 Fntb protein_coding protein_coding MGP_CBAJ_T0034793.1 MGP_CBAJ_G0019577.1 mouse_genomes_project 12 82388853 82493297 + MGP_CBAJ_P0034793 Fntb protein_coding protein_coding MGP_CBAJ_T0034794.1 MGP_CBAJ_G0019577.1 mouse_genomes_project 12 82388872 82397200 + Fntb protein_coding processed_transcript MGP_CBAJ_T0034795.1 MGP_CBAJ_G0019577.1 mouse_genomes_project 12 82391736 82453418 + Fntb protein_coding processed_transcript MGP_CBAJ_T0034796.1 MGP_CBAJ_G0019577.1 mouse_genomes_project 12 82452670 82482265 + Fntb protein_coding processed_transcript MGP_CBAJ_T0034797.1 MGP_CBAJ_G0019577.1 mouse_genomes_project 12 82481529 82482344 + Fntb protein_coding processed_transcript MGP_CBAJ_T0034798.1 MGP_CBAJ_G0019577.1 mouse_genomes_project 12 82482010 82486885 + Fntb protein_coding retained_intron MGP_CBAJ_T0000083.1 MGP_CBAJ_G0000063.1 mouse_genomes_project 12 125113003 125113434 - MGP_CBAJ_P0000083 Ighv3-6 IG_V_gene IG_V_gene MGP_CBAJ_T0000084.1 MGP_CBAJ_G0000063.1 mouse_genomes_project 12 125113008 125113434 - MGP_CBAJ_P0000084 Ighv3-6 IG_V_gene IG_V_gene MGP_CBAJ_T0034805.1 MGP_CBAJ_G0019583.1 mouse_genomes_project 12 83915679 84457618 + MGP_CBAJ_P0034805 Gphn protein_coding protein_coding MGP_CBAJ_T0034806.1 MGP_CBAJ_G0019583.1 mouse_genomes_project 12 83915679 84457618 + MGP_CBAJ_P0034806 Gphn protein_coding protein_coding MGP_CBAJ_T0034807.1 MGP_CBAJ_G0019583.1 mouse_genomes_project 12 83915802 84457617 + MGP_CBAJ_P0034807 Gphn protein_coding unknown_likely_coding MGP_CBAJ_T0034808.1 MGP_CBAJ_G0019583.1 mouse_genomes_project 12 84042168 84457617 + MGP_CBAJ_P0034808 Gphn protein_coding unknown_likely_coding MGP_CBAJ_T0035137.1 MGP_CBAJ_G0019686.1 mouse_genomes_project 12 93539308 93567947 - MGP_CBAJ_P0035137 Angel1 protein_coding protein_coding MGP_CBAJ_T0035138.1 MGP_CBAJ_G0019686.1 mouse_genomes_project 12 93541001 93544976 - Angel1 protein_coding processed_transcript MGP_CBAJ_T0035139.1 MGP_CBAJ_G0019686.1 mouse_genomes_project 12 93541119 93558128 - Angel1 protein_coding processed_transcript MGP_CBAJ_T0035140.1 MGP_CBAJ_G0019686.1 mouse_genomes_project 12 93541161 93544771 - Angel1 protein_coding processed_transcript MGP_CBAJ_T0035141.1 MGP_CBAJ_G0019686.1 mouse_genomes_project 12 93541245 93559672 - Angel1 protein_coding processed_transcript MGP_CBAJ_T0035142.1 MGP_CBAJ_G0019686.1 mouse_genomes_project 12 93559831 93563425 - Angel1 protein_coding processed_transcript MGP_CBAJ_T0000064.1 MGP_CBAJ_G0000050.1 mouse_genomes_project 12 124743199 124743656 - MGP_CBAJ_P0000064 Ighv7-2 IG_V_gene IG_V_gene MGP_CBAJ_T0000065.1 MGP_CBAJ_G0000050.1 mouse_genomes_project 12 124743199 124743656 - MGP_CBAJ_P0000065 Ighv7-2 IG_V_gene IG_V_gene MGP_CBAJ_T0035723.1 MGP_CBAJ_G0019880.1 mouse_genomes_project 12 123677504 123691712 + MGP_CBAJ_P0035723 Tex22 protein_coding protein_coding MGP_CBAJ_T0035724.1 MGP_CBAJ_G0019880.1 mouse_genomes_project 12 123677504 123691719 + MGP_CBAJ_P0035724 Tex22 protein_coding protein_coding MGP_CBAJ_T0035725.1 MGP_CBAJ_G0019880.1 mouse_genomes_project 12 123677763 123691719 + MGP_CBAJ_P0035725 Tex22 protein_coding protein_coding MGP_CBAJ_T0035726.1 MGP_CBAJ_G0019880.1 mouse_genomes_project 12 123677785 123678379 + MGP_CBAJ_P0035726 Tex22 protein_coding protein_coding MGP_CBAJ_T0035708.1 MGP_CBAJ_G0019869.1 mouse_genomes_project 12 123333857 123345444 + MGP_CBAJ_P0035708 Pld4 protein_coding protein_coding MGP_CBAJ_T0034717.1 MGP_CBAJ_G0019550.1 mouse_genomes_project 12 78425478 78435299 - MGP_CBAJ_P0034717 D830013O20Rik protein_coding protein_coding MGP_CBAJ_T0009675.1 MGP_CBAJ_G0007813.1 mouse_genomes_project 12 58530733 58530824 - Gm23394 miRNA miRNA MGP_CBAJ_T0009705.1 MGP_CBAJ_G0007843.1 mouse_genomes_project 12 118891435 118891494 - Mir6988 miRNA miRNA MGP_CBAJ_T0034307.1 MGP_CBAJ_G0019399.1 mouse_genomes_project 12 34200270 34464329 - MGP_CBAJ_P0034307 Gm18025 protein_coding unknown_likely_coding MGP_CBAJ_T0034308.1 MGP_CBAJ_G0019399.1 mouse_genomes_project 12 34433725 34434655 - MGP_CBAJ_P0034308 Gm18025 protein_coding protein_coding MGP_CBAJ_T0034225.1 MGP_CBAJ_G0019371.1 mouse_genomes_project 12 30338576 30345326 + MGP_CBAJ_P0034225 Tmem18 protein_coding protein_coding MGP_CBAJ_T0034719.1 MGP_CBAJ_G0019552.1 mouse_genomes_project 12 78695654 78920687 + MGP_CBAJ_P0034719 Prkch protein_coding protein_coding MGP_CBAJ_T0034720.1 MGP_CBAJ_G0019552.1 mouse_genomes_project 12 78695700 78897547 + MGP_CBAJ_P0034720 Prkch protein_coding protein_coding MGP_CBAJ_T0000826.1 MGP_CBAJ_G0000762.1 mouse_genomes_project 12 77929173 77929992 + TEC TEC MGP_CBAJ_T0098777.1 MGP_CBAJ_G0037032.1 mouse_genomes_project 12 93488681 93488788 + Gm22004 snRNA snRNA MGP_CBAJ_T0009784.1 MGP_CBAJ_G0007922.1 mouse_genomes_project 12 127413105 127413168 - Mir6388 miRNA miRNA MGP_CBAJ_T0099970.1 MGP_CBAJ_G0038225.1 mouse_genomes_project 12 7558766 7558894 - Gm23979 snoRNA snoRNA MGP_CBAJ_T0033931.1 MGP_CBAJ_G0019275.1 mouse_genomes_project 12 375894 420990 + MGP_CBAJ_P0033931 Kif3c protein_coding protein_coding MGP_CBAJ_T0100000.1 MGP_CBAJ_G0038255.1 mouse_genomes_project 12 69529414 69529546 - Gm23948 snoRNA snoRNA MGP_CBAJ_T0009745.1 MGP_CBAJ_G0007883.1 mouse_genomes_project 12 119908033 119908096 + Mir495 miRNA miRNA MGP_CBAJ_T0100002.1 MGP_CBAJ_G0038257.1 mouse_genomes_project 12 70682247 70682366 - Gm23826 snoRNA snoRNA MGP_CBAJ_T0097926.1 MGP_CBAJ_G0036199.1 mouse_genomes_project 12 58795391 58795511 - Gm23799 rRNA rRNA MGP_CBAJ_T0000101.1 MGP_CBAJ_G0000077.1 mouse_genomes_project 12 125435672 125436106 - MGP_CBAJ_P0000101 Ighv1-4 IG_V_gene IG_V_gene MGP_CBAJ_T0034845.1 MGP_CBAJ_G0019604.1 mouse_genomes_project 12 86649839 86661021 - MGP_CBAJ_P0034845 protein_coding protein_coding MGP_CBAJ_T0034846.1 MGP_CBAJ_G0019604.1 mouse_genomes_project 12 86650089 86660512 - MGP_CBAJ_P0034846 protein_coding protein_coding MGP_CBAJ_T0000831.1 MGP_CBAJ_G0000767.1 mouse_genomes_project 12 92809950 92810557 + TEC TEC MGP_CBAJ_T0035380.1 MGP_CBAJ_G0019758.1 mouse_genomes_project 12 111806987 111808216 + MGP_CBAJ_P0035380 Cox8c protein_coding protein_coding MGP_CBAJ_T0098748.1 MGP_CBAJ_G0037003.1 mouse_genomes_project 12 35738581 35738688 + Gm26071 snRNA snRNA MGP_CBAJ_T0034977.1 MGP_CBAJ_G0019638.1 mouse_genomes_project 12 90488108 90494489 + MGP_CBAJ_P0034977 Acot4 protein_coding protein_coding MGP_CBAJ_T0034978.1 MGP_CBAJ_G0019638.1 mouse_genomes_project 12 90488436 90491988 + Acot4 protein_coding retained_intron MGP_CBAJ_T0035375.1 MGP_CBAJ_G0019754.1 mouse_genomes_project 12 111642381 111646183 + MGP_CBAJ_P0035375 Tmem251 protein_coding protein_coding MGP_CBAJ_T0035276.1 MGP_CBAJ_G0019724.1 mouse_genomes_project 12 107076693 107204104 - MGP_CBAJ_P0035276 Eml5 protein_coding protein_coding MGP_CBAJ_T0035277.1 MGP_CBAJ_G0019724.1 mouse_genomes_project 12 107088996 107203648 - MGP_CBAJ_P0035277 Eml5 protein_coding unknown_likely_coding MGP_CBAJ_T0000125.1 MGP_CBAJ_G0000094.1 mouse_genomes_project 12 127471346 127471747 - MGP_CBAJ_P0000125 IG_V_gene IG_V_gene MGP_CBAJ_T0034187.1 MGP_CBAJ_G0019356.1 mouse_genomes_project 12 25749239 25762929 - MGP_CBAJ_P0034187 Rsad2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034188.1 MGP_CBAJ_G0019356.1 mouse_genomes_project 12 25749239 25762950 - MGP_CBAJ_P0034188 Rsad2 protein_coding protein_coding MGP_CBAJ_T0034189.1 MGP_CBAJ_G0019356.1 mouse_genomes_project 12 25757135 25761360 - Rsad2 protein_coding processed_transcript MGP_CBAJ_T0009768.1 MGP_CBAJ_G0007906.1 mouse_genomes_project 12 119932457 119932537 - Gm24321 miRNA miRNA MGP_CBAJ_T0034903.1 MGP_CBAJ_G0019622.1 mouse_genomes_project 12 88034096 88190159 + MGP_CBAJ_P0034903 Pcnx protein_coding protein_coding MGP_CBAJ_T0034904.1 MGP_CBAJ_G0019622.1 mouse_genomes_project 12 88034438 88190161 + MGP_CBAJ_P0034904 Pcnx protein_coding unknown_likely_coding MGP_CBAJ_T0035313.1 MGP_CBAJ_G0019734.1 mouse_genomes_project 12 109069718 109253068 - MGP_CBAJ_P0035313 Rps6ka5 protein_coding unknown_likely_coding MGP_CBAJ_T0035314.1 MGP_CBAJ_G0019734.1 mouse_genomes_project 12 109071061 109253216 - MGP_CBAJ_P0035314 Rps6ka5 protein_coding protein_coding MGP_CBAJ_T0034429.1 MGP_CBAJ_G0019448.1 mouse_genomes_project 12 54960749 55456337 + MGP_CBAJ_P0034429 Akap6 protein_coding protein_coding MGP_CBAJ_T0034706.1 MGP_CBAJ_G0019547.1 mouse_genomes_project 12 78139710 78320104 + MGP_CBAJ_P0034706 Mnat1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034707.1 MGP_CBAJ_G0019547.1 mouse_genomes_project 12 78139710 78321240 + MGP_CBAJ_P0034707 Mnat1 protein_coding protein_coding MGP_CBAJ_T0034708.1 MGP_CBAJ_G0019547.1 mouse_genomes_project 12 78139710 78275101 + MGP_CBAJ_P0034708 Mnat1 protein_coding protein_coding MGP_CBAJ_T0034709.1 MGP_CBAJ_G0019547.1 mouse_genomes_project 12 78139832 78319787 + MGP_CBAJ_P0034709 Mnat1 protein_coding unknown_likely_coding MGP_CBAJ_T0009702.1 MGP_CBAJ_G0007840.1 mouse_genomes_project 12 115505196 115505266 - Gm22120 miRNA miRNA MGP_CBAJ_T0012642.1 MGP_CBAJ_G0010754.1 mouse_genomes_project 12 53906266 53906577 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0034494.1 MGP_CBAJ_G0019477.1 mouse_genomes_project 12 61269433 61273975 - MGP_CBAJ_P0034494 Clec14a protein_coding protein_coding MGP_CBAJ_T0034540.1 MGP_CBAJ_G0019488.1 mouse_genomes_project 12 68848938 68855606 + MGP_CBAJ_P0034540 Gm527 protein_coding protein_coding MGP_CBAJ_T0035311.1 MGP_CBAJ_G0019733.1 mouse_genomes_project 12 108798854 108924587 - MGP_CBAJ_P0035311 Ttc7b protein_coding unknown_likely_coding MGP_CBAJ_T0035312.1 MGP_CBAJ_G0019733.1 mouse_genomes_project 12 108798857 109032829 - MGP_CBAJ_P0035312 Ttc7b protein_coding protein_coding MGP_CBAJ_T0034896.1 MGP_CBAJ_G0019618.1 mouse_genomes_project 12 87686991 87696618 - MGP_CBAJ_P0034896 Adam21 protein_coding protein_coding MGP_CBAJ_T0034251.1 MGP_CBAJ_G0019381.1 mouse_genomes_project 12 31317328 31333801 - MGP_CBAJ_P0034251 Cbll1 protein_coding protein_coding MGP_CBAJ_T0034252.1 MGP_CBAJ_G0019381.1 mouse_genomes_project 12 31317435 31333801 - MGP_CBAJ_P0034252 Cbll1 protein_coding protein_coding MGP_CBAJ_T0034253.1 MGP_CBAJ_G0019381.1 mouse_genomes_project 12 31319649 31333801 - MGP_CBAJ_P0034253 Cbll1 protein_coding protein_coding MGP_CBAJ_T0034254.1 MGP_CBAJ_G0019381.1 mouse_genomes_project 12 31320413 31333742 - MGP_CBAJ_P0034254 Cbll1 protein_coding protein_coding MGP_CBAJ_T0034255.1 MGP_CBAJ_G0019381.1 mouse_genomes_project 12 31320423 31333740 - MGP_CBAJ_P0034255 Cbll1 protein_coding protein_coding MGP_CBAJ_T0100013.1 MGP_CBAJ_G0038268.1 mouse_genomes_project 12 111091261 111091476 - Gm25203 snoRNA snoRNA MGP_CBAJ_T0099977.1 MGP_CBAJ_G0038232.1 mouse_genomes_project 12 27105897 27106022 + Gm24326 snoRNA snoRNA MGP_CBAJ_T0035011.1 MGP_CBAJ_G0019648.1 mouse_genomes_project 12 90891744 90903819 + MGP_CBAJ_P0035011 Coq6 protein_coding protein_coding MGP_CBAJ_T0035012.1 MGP_CBAJ_G0019648.1 mouse_genomes_project 12 90892055 90903823 + MGP_CBAJ_P0035012 Coq6 protein_coding protein_coding MGP_CBAJ_T0035013.1 MGP_CBAJ_G0019648.1 mouse_genomes_project 12 90892083 90903823 + Coq6 protein_coding retained_intron MGP_CBAJ_T0035014.1 MGP_CBAJ_G0019648.1 mouse_genomes_project 12 90892117 90903819 + MGP_CBAJ_P0035014 Coq6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035015.1 MGP_CBAJ_G0019648.1 mouse_genomes_project 12 90892126 90903819 + MGP_CBAJ_P0035015 Coq6 protein_coding protein_coding MGP_CBAJ_T0035016.1 MGP_CBAJ_G0019648.1 mouse_genomes_project 12 90892128 90897131 + Coq6 protein_coding processed_transcript MGP_CBAJ_T0035017.1 MGP_CBAJ_G0019648.1 mouse_genomes_project 12 90892130 90903815 + Coq6 protein_coding retained_intron MGP_CBAJ_T0035018.1 MGP_CBAJ_G0019648.1 mouse_genomes_project 12 90892151 90901058 + MGP_CBAJ_P0035018 Coq6 protein_coding protein_coding MGP_CBAJ_T0035019.1 MGP_CBAJ_G0019648.1 mouse_genomes_project 12 90898452 90902270 + Coq6 protein_coding processed_transcript MGP_CBAJ_T0035020.1 MGP_CBAJ_G0019648.1 mouse_genomes_project 12 90898452 90903819 + Coq6 protein_coding processed_transcript MGP_CBAJ_T0035021.1 MGP_CBAJ_G0019648.1 mouse_genomes_project 12 90901028 90902192 + Coq6 protein_coding retained_intron MGP_CBAJ_T0035035.1 MGP_CBAJ_G0019653.1 mouse_genomes_project 12 90996095 91080591 + MGP_CBAJ_P0035035 Lin52 protein_coding unknown_likely_coding MGP_CBAJ_T0034206.1 MGP_CBAJ_G0019366.1 mouse_genomes_project 12 28418311 28537144 + MGP_CBAJ_P0034206 Tssc1 protein_coding protein_coding MGP_CBAJ_T0000827.1 MGP_CBAJ_G0000763.1 mouse_genomes_project 12 89226753 89228064 - TEC TEC MGP_CBAJ_T0034470.1 MGP_CBAJ_G0019470.1 mouse_genomes_project 12 59488769 59509714 + MGP_CBAJ_P0034470 Pax9 protein_coding protein_coding MGP_CBAJ_T0034471.1 MGP_CBAJ_G0019470.1 mouse_genomes_project 12 59492646 59509829 + MGP_CBAJ_P0034471 Pax9 protein_coding protein_coding MGP_CBAJ_T0034472.1 MGP_CBAJ_G0019470.1 mouse_genomes_project 12 59492736 59507340 + Pax9 protein_coding retained_intron MGP_CBAJ_T0035077.1 MGP_CBAJ_G0019669.1 mouse_genomes_project 12 91850286 91857426 + MGP_CBAJ_P0035077 Eif2b2 protein_coding protein_coding MGP_CBAJ_T0035078.1 MGP_CBAJ_G0019669.1 mouse_genomes_project 12 91850309 91853637 + MGP_CBAJ_P0035078 Eif2b2 protein_coding protein_coding MGP_CBAJ_T0035079.1 MGP_CBAJ_G0019669.1 mouse_genomes_project 12 91850318 91856948 + MGP_CBAJ_P0035079 Eif2b2 protein_coding protein_coding MGP_CBAJ_T0035080.1 MGP_CBAJ_G0019669.1 mouse_genomes_project 12 91850320 91850755 + Eif2b2 protein_coding retained_intron MGP_CBAJ_T0035081.1 MGP_CBAJ_G0019669.1 mouse_genomes_project 12 91850351 91853624 + Eif2b2 protein_coding retained_intron MGP_CBAJ_T0035082.1 MGP_CBAJ_G0019669.1 mouse_genomes_project 12 91850387 91854286 + Eif2b2 protein_coding retained_intron MGP_CBAJ_T0035083.1 MGP_CBAJ_G0019669.1 mouse_genomes_project 12 91855323 91857291 + Eif2b2 protein_coding retained_intron MGP_CBAJ_T0017043.1 MGP_CBAJ_G0014968.1 mouse_genomes_project 12 33399033 33436168 - Atxn7l1os2 processed_transcript processed_transcript MGP_CBAJ_T0098769.1 MGP_CBAJ_G0037024.1 mouse_genomes_project 12 75367405 75367506 + Gm24474 snRNA snRNA MGP_CBAJ_T0035334.1 MGP_CBAJ_G0019740.1 mouse_genomes_project 12 110400864 110475943 - MGP_CBAJ_P0035334 Tc2n protein_coding protein_coding MGP_CBAJ_T0035335.1 MGP_CBAJ_G0019740.1 mouse_genomes_project 12 110401977 110468943 - MGP_CBAJ_P0035335 Tc2n protein_coding nonsense_mediated_decay MGP_CBAJ_T0035336.1 MGP_CBAJ_G0019740.1 mouse_genomes_project 12 110404456 110466576 - MGP_CBAJ_P0035336 Tc2n protein_coding protein_coding MGP_CBAJ_T0035337.1 MGP_CBAJ_G0019740.1 mouse_genomes_project 12 110404503 110468611 - MGP_CBAJ_P0035337 Tc2n protein_coding protein_coding MGP_CBAJ_T0006362.1 MGP_CBAJ_G0005296.1 mouse_genomes_project 12 114871052 114931126 + lincRNA lincRNA MGP_CBAJ_T0006363.1 MGP_CBAJ_G0005296.1 mouse_genomes_project 12 114871451 114931124 + lincRNA lincRNA MGP_CBAJ_T0035448.1 MGP_CBAJ_G0019779.1 mouse_genomes_project 12 113293755 113303259 - MGP_CBAJ_P0035448 Serpina3c protein_coding protein_coding MGP_CBAJ_T0098762.1 MGP_CBAJ_G0037017.1 mouse_genomes_project 12 65483851 65483955 + Gm24750 snRNA snRNA MGP_CBAJ_T0012679.1 MGP_CBAJ_G0010791.1 mouse_genomes_project 12 110687477 110687937 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0034844.1 MGP_CBAJ_G0019603.1 mouse_genomes_project 12 86508673 86598926 + MGP_CBAJ_P0034844 Galnt16 protein_coding protein_coding MGP_CBAJ_T0098274.1 MGP_CBAJ_G0036543.1 mouse_genomes_project 12 91526169 91527140 - Gm17193 sense_intronic sense_intronic MGP_CBAJ_T0035765.1 MGP_CBAJ_G0019890.1 mouse_genomes_project 12 127694320 127756579 - MGP_CBAJ_P0035765 Wdr60 protein_coding protein_coding MGP_CBAJ_T0035185.1 MGP_CBAJ_G0019702.1 mouse_genomes_project 12 94339539 94343137 - Alkbh1 protein_coding processed_transcript MGP_CBAJ_T0035186.1 MGP_CBAJ_G0019702.1 mouse_genomes_project 12 94339868 94357528 - MGP_CBAJ_P0035186 Alkbh1 protein_coding protein_coding MGP_CBAJ_T0035187.1 MGP_CBAJ_G0019702.1 mouse_genomes_project 12 94341776 94357515 - MGP_CBAJ_P0035187 Alkbh1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035188.1 MGP_CBAJ_G0019702.1 mouse_genomes_project 12 94341776 94357517 - MGP_CBAJ_P0035188 Alkbh1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035189.1 MGP_CBAJ_G0019702.1 mouse_genomes_project 12 94341779 94357525 - MGP_CBAJ_P0035189 Alkbh1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035190.1 MGP_CBAJ_G0019702.1 mouse_genomes_project 12 94342509 94357517 - MGP_CBAJ_P0035190 Alkbh1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035191.1 MGP_CBAJ_G0019702.1 mouse_genomes_project 12 94342820 94352260 - MGP_CBAJ_P0035191 Alkbh1 protein_coding protein_coding MGP_CBAJ_T0035192.1 MGP_CBAJ_G0019702.1 mouse_genomes_project 12 94345129 94355427 - Alkbh1 protein_coding processed_transcript MGP_CBAJ_T0035193.1 MGP_CBAJ_G0019702.1 mouse_genomes_project 12 94346945 94357522 - MGP_CBAJ_P0035193 Alkbh1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035194.1 MGP_CBAJ_G0019702.1 mouse_genomes_project 12 94346956 94357528 - Alkbh1 protein_coding retained_intron MGP_CBAJ_T0035195.1 MGP_CBAJ_G0019702.1 mouse_genomes_project 12 94356371 94357706 - Alkbh1 protein_coding retained_intron MGP_CBAJ_T0035196.1 MGP_CBAJ_G0019702.1 mouse_genomes_project 12 94357199 94357607 - MGP_CBAJ_P0035196 Alkbh1 protein_coding protein_coding MGP_CBAJ_T0003341.1 MGP_CBAJ_G0003070.1 mouse_genomes_project 12 91711522 91713377 + Prox2os antisense antisense MGP_CBAJ_T0034787.1 MGP_CBAJ_G0019579.1 mouse_genomes_project 12 82346261 82373173 - MGP_CBAJ_P0034787 Rab15 protein_coding protein_coding MGP_CBAJ_T0034788.1 MGP_CBAJ_G0019579.1 mouse_genomes_project 12 82348180 82349141 - Rab15 protein_coding retained_intron MGP_CBAJ_T0034789.1 MGP_CBAJ_G0019579.1 mouse_genomes_project 12 82348428 82353788 - MGP_CBAJ_P0034789 Rab15 protein_coding protein_coding MGP_CBAJ_T0034790.1 MGP_CBAJ_G0019579.1 mouse_genomes_project 12 82348636 82373764 - MGP_CBAJ_P0034790 Rab15 protein_coding protein_coding MGP_CBAJ_T0034791.1 MGP_CBAJ_G0019579.1 mouse_genomes_project 12 82348872 82369914 - MGP_CBAJ_P0034791 Rab15 protein_coding protein_coding MGP_CBAJ_T0034792.1 MGP_CBAJ_G0019579.1 mouse_genomes_project 12 82351189 82373318 - Rab15 protein_coding retained_intron MGP_CBAJ_T0003334.1 MGP_CBAJ_G0003063.1 mouse_genomes_project 12 87321185 87336071 + Gm3693 antisense antisense MGP_CBAJ_T0009662.1 MGP_CBAJ_G0007800.1 mouse_genomes_project 12 14391563 14391671 - Mir6387 miRNA miRNA MGP_CBAJ_T0097917.1 MGP_CBAJ_G0036190.1 mouse_genomes_project 12 3239612 3239727 + Gm23752 rRNA rRNA MGP_CBAJ_T0035307.1 MGP_CBAJ_G0019732.1 mouse_genomes_project 12 108693819 108704190 + MGP_CBAJ_P0035307 Calm1 protein_coding protein_coding MGP_CBAJ_T0035308.1 MGP_CBAJ_G0019732.1 mouse_genomes_project 12 108693913 108698322 + Calm1 protein_coding retained_intron MGP_CBAJ_T0035309.1 MGP_CBAJ_G0019732.1 mouse_genomes_project 12 108694528 108704190 + MGP_CBAJ_P0035309 Calm1 protein_coding protein_coding MGP_CBAJ_T0035310.1 MGP_CBAJ_G0019732.1 mouse_genomes_project 12 108699787 108700880 + Calm1 protein_coding retained_intron MGP_CBAJ_T0009724.1 MGP_CBAJ_G0007862.1 mouse_genomes_project 12 119782656 119782718 + Mir136 miRNA miRNA MGP_CBAJ_T0009740.1 MGP_CBAJ_G0007878.1 mouse_genomes_project 12 119904592 119904677 + Mir494 miRNA miRNA MGP_CBAJ_T0003346.1 MGP_CBAJ_G0003074.1 mouse_genomes_project 12 110941392 110946435 - antisense antisense MGP_CBAJ_T0099994.1 MGP_CBAJ_G0038249.1 mouse_genomes_project 12 62258923 62259045 + Gm24233 snoRNA snoRNA MGP_CBAJ_T0006307.1 MGP_CBAJ_G0005252.1 mouse_genomes_project 12 26571363 26590867 - Gm9866 lincRNA lincRNA MGP_CBAJ_T0006308.1 MGP_CBAJ_G0005252.1 mouse_genomes_project 12 26571369 26591189 - Gm9866 lincRNA lincRNA MGP_CBAJ_T0006309.1 MGP_CBAJ_G0005252.1 mouse_genomes_project 12 26572453 26591002 - Gm9866 lincRNA lincRNA MGP_CBAJ_T0006310.1 MGP_CBAJ_G0005252.1 mouse_genomes_project 12 26575972 26591018 - Gm9866 lincRNA lincRNA MGP_CBAJ_T0012673.1 MGP_CBAJ_G0010785.1 mouse_genomes_project 12 104000023 104000377 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0011200.1 MGP_CBAJ_G0009338.1 mouse_genomes_project 12 59020841 59021126 - Gm24685 misc_RNA misc_RNA MGP_CBAJ_T0034331.1 MGP_CBAJ_G0019412.1 mouse_genomes_project 12 36708388 36712670 + MGP_CBAJ_P0034331 Sostdc1 protein_coding protein_coding MGP_CBAJ_T0034786.1 MGP_CBAJ_G0019578.1 mouse_genomes_project 12 82340639 82343861 - MGP_CBAJ_P0034786 protein_coding protein_coding MGP_CBAJ_T0098786.1 MGP_CBAJ_G0037041.1 mouse_genomes_project 12 128001589 128001653 - Gm27649 snRNA snRNA MGP_CBAJ_T0035180.1 MGP_CBAJ_G0019701.1 mouse_genomes_project 12 94218465 94301017 - MGP_CBAJ_P0035180 Sptlc2 protein_coding protein_coding MGP_CBAJ_T0035181.1 MGP_CBAJ_G0019701.1 mouse_genomes_project 12 94221345 94256555 - Sptlc2 protein_coding retained_intron MGP_CBAJ_T0035182.1 MGP_CBAJ_G0019701.1 mouse_genomes_project 12 94222914 94241890 - Sptlc2 protein_coding processed_transcript MGP_CBAJ_T0035183.1 MGP_CBAJ_G0019701.1 mouse_genomes_project 12 94259164 94263084 - Sptlc2 protein_coding retained_intron MGP_CBAJ_T0035184.1 MGP_CBAJ_G0019701.1 mouse_genomes_project 12 94259440 94300903 - Sptlc2 protein_coding processed_transcript MGP_CBAJ_T0097921.1 MGP_CBAJ_G0036194.1 mouse_genomes_project 12 27627476 27627614 - Gm25923 rRNA rRNA MGP_CBAJ_T0100007.1 MGP_CBAJ_G0038262.1 mouse_genomes_project 12 89012476 89012613 - Gm22149 snoRNA snoRNA MGP_CBAJ_T0035642.1 MGP_CBAJ_G0019849.1 mouse_genomes_project 12 122128421 122132170 - MGP_CBAJ_P0035642 Bag5 protein_coding protein_coding MGP_CBAJ_T0035643.1 MGP_CBAJ_G0019849.1 mouse_genomes_project 12 122128820 122131840 - MGP_CBAJ_P0035643 Bag5 protein_coding protein_coding MGP_CBAJ_T0035644.1 MGP_CBAJ_G0019849.1 mouse_genomes_project 12 122130125 122131866 - MGP_CBAJ_P0035644 Bag5 protein_coding protein_coding MGP_CBAJ_T0035645.1 MGP_CBAJ_G0019849.1 mouse_genomes_project 12 122130191 122131866 - MGP_CBAJ_P0035645 Bag5 protein_coding protein_coding MGP_CBAJ_T0012632.1 MGP_CBAJ_G0010744.1 mouse_genomes_project 12 6572104 6574481 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0034870.1 MGP_CBAJ_G0019612.1 mouse_genomes_project 12 87290845 87434249 - MGP_CBAJ_P0034870 Slc8a3 protein_coding protein_coding MGP_CBAJ_T0034871.1 MGP_CBAJ_G0019612.1 mouse_genomes_project 12 87291208 87434044 - MGP_CBAJ_P0034871 Slc8a3 protein_coding protein_coding MGP_CBAJ_T0034872.1 MGP_CBAJ_G0019612.1 mouse_genomes_project 12 87292378 87434265 - MGP_CBAJ_P0034872 Slc8a3 protein_coding protein_coding MGP_CBAJ_T0034873.1 MGP_CBAJ_G0019612.1 mouse_genomes_project 12 87295329 87391930 - MGP_CBAJ_P0034873 Slc8a3 protein_coding protein_coding MGP_CBAJ_T0034874.1 MGP_CBAJ_G0019612.1 mouse_genomes_project 12 87306959 87434265 - Slc8a3 protein_coding retained_intron MGP_CBAJ_T0034009.1 MGP_CBAJ_G0019291.1 mouse_genomes_project 12 2006659 2040639 - MGP_CBAJ_P0034009 Fam228b protein_coding unknown_likely_coding MGP_CBAJ_T0034010.1 MGP_CBAJ_G0019291.1 mouse_genomes_project 12 2011811 2041408 - MGP_CBAJ_P0034010 Fam228b protein_coding protein_coding MGP_CBAJ_T0034373.1 MGP_CBAJ_G0019423.1 mouse_genomes_project 12 41153022 41155503 + MGP_CBAJ_P0034373 Gm7008 protein_coding protein_coding MGP_CBAJ_T0034374.1 MGP_CBAJ_G0019423.1 mouse_genomes_project 12 41153628 41159449 + MGP_CBAJ_P0034374 Gm7008 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034375.1 MGP_CBAJ_G0019423.1 mouse_genomes_project 12 41153693 41159434 + MGP_CBAJ_P0034375 Gm7008 protein_coding nonsense_mediated_decay MGP_CBAJ_T0100010.1 MGP_CBAJ_G0038265.1 mouse_genomes_project 12 98208503 98208632 + Gm23195 snoRNA snoRNA MGP_CBAJ_T0009779.1 MGP_CBAJ_G0007917.1 mouse_genomes_project 12 123222761 123222836 - Mir6939 miRNA miRNA MGP_CBAJ_T0034416.1 MGP_CBAJ_G0019441.1 mouse_genomes_project 12 53844916 53900685 + MGP_CBAJ_P0034416 Ap4s1 protein_coding protein_coding MGP_CBAJ_T0098760.1 MGP_CBAJ_G0037015.1 mouse_genomes_project 12 62152413 62152588 + Gm22973 snRNA snRNA MGP_CBAJ_T0009678.1 MGP_CBAJ_G0007816.1 mouse_genomes_project 12 73638923 73639003 + miRNA miRNA MGP_CBAJ_T0009726.1 MGP_CBAJ_G0007864.1 mouse_genomes_project 12 119799161 119799281 + Mir1188 miRNA miRNA MGP_CBAJ_T0003311.1 MGP_CBAJ_G0003044.1 mouse_genomes_project 12 834806 849375 - Dtnbos antisense antisense MGP_CBAJ_T0034424.1 MGP_CBAJ_G0019446.1 mouse_genomes_project 12 54291831 54512034 + MGP_CBAJ_P0034424 Nubpl protein_coding protein_coding MGP_CBAJ_T0034425.1 MGP_CBAJ_G0019446.1 mouse_genomes_project 12 54291850 54335789 + Nubpl protein_coding retained_intron MGP_CBAJ_T0034426.1 MGP_CBAJ_G0019446.1 mouse_genomes_project 12 54291855 54295177 + Nubpl protein_coding retained_intron MGP_CBAJ_T0034427.1 MGP_CBAJ_G0019446.1 mouse_genomes_project 12 54323248 54502548 + MGP_CBAJ_P0034427 Nubpl protein_coding nonsense_mediated_decay MGP_CBAJ_T0034466.1 MGP_CBAJ_G0019467.1 mouse_genomes_project 12 59093334 59110973 - MGP_CBAJ_P0034466 Mbip protein_coding protein_coding MGP_CBAJ_T0034456.1 MGP_CBAJ_G0019461.1 mouse_genomes_project 12 58017772 58073330 + MGP_CBAJ_P0034456 Psma6 protein_coding protein_coding MGP_CBAJ_T0034457.1 MGP_CBAJ_G0019461.1 mouse_genomes_project 12 58039096 58073474 + MGP_CBAJ_P0034457 Psma6 protein_coding protein_coding MGP_CBAJ_T0034458.1 MGP_CBAJ_G0019461.1 mouse_genomes_project 12 58039116 58073461 + MGP_CBAJ_P0034458 Psma6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034459.1 MGP_CBAJ_G0019461.1 mouse_genomes_project 12 58047696 58054460 + Psma6 protein_coding processed_transcript MGP_CBAJ_T0009716.1 MGP_CBAJ_G0007854.1 mouse_genomes_project 12 119775541 119775630 + Mir3070a miRNA miRNA MGP_CBAJ_T0034207.1 MGP_CBAJ_G0019367.1 mouse_genomes_project 12 29252479 29659433 + MGP_CBAJ_P0034207 Myt1l protein_coding protein_coding MGP_CBAJ_T0034208.1 MGP_CBAJ_G0019367.1 mouse_genomes_project 12 29258960 29659433 + MGP_CBAJ_P0034208 Myt1l protein_coding protein_coding MGP_CBAJ_T0035683.1 MGP_CBAJ_G0019858.1 mouse_genomes_project 12 122602024 122629880 + MGP_CBAJ_P0035683 Aspg protein_coding protein_coding MGP_CBAJ_T0012671.1 MGP_CBAJ_G0010783.1 mouse_genomes_project 12 99351971 99352349 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0034355.1 MGP_CBAJ_G0019419.1 mouse_genomes_project 12 40890184 40925814 - MGP_CBAJ_P0034355 Arl4a protein_coding nonsense_mediated_decay MGP_CBAJ_T0034356.1 MGP_CBAJ_G0019419.1 mouse_genomes_project 12 40890184 40925823 - MGP_CBAJ_P0034356 Arl4a protein_coding nonsense_mediated_decay MGP_CBAJ_T0034357.1 MGP_CBAJ_G0019419.1 mouse_genomes_project 12 40895145 40900017 - Arl4a protein_coding processed_transcript MGP_CBAJ_T0034358.1 MGP_CBAJ_G0019419.1 mouse_genomes_project 12 40921737 40925876 - MGP_CBAJ_P0034358 Arl4a protein_coding protein_coding MGP_CBAJ_T0034359.1 MGP_CBAJ_G0019419.1 mouse_genomes_project 12 40924268 40926472 - MGP_CBAJ_P0034359 Arl4a protein_coding protein_coding MGP_CBAJ_T0034469.1 MGP_CBAJ_G0019469.1 mouse_genomes_project 12 59407298 59409198 - MGP_CBAJ_P0034469 Nkx2-9 protein_coding protein_coding MGP_CBAJ_T0035408.1 MGP_CBAJ_G0019764.1 mouse_genomes_project 12 112379403 112380402 - MGP_CBAJ_P0035408 9330161L09Rik protein_coding protein_coding MGP_CBAJ_T0034973.1 MGP_CBAJ_G0019634.1 mouse_genomes_project 12 90372522 90373188 - MGP_CBAJ_P0034973 Gm26571 protein_coding protein_coding MGP_CBAJ_T0034092.1 MGP_CBAJ_G0019325.1 mouse_genomes_project 12 11601580 11956576 + MGP_CBAJ_P0034092 Nbas protein_coding protein_coding MGP_CBAJ_T0011204.1 MGP_CBAJ_G0009342.1 mouse_genomes_project 12 75657176 75657486 + Gm24857 misc_RNA misc_RNA MGP_CBAJ_T0000253.1 MGP_CBAJ_G0000198.1 mouse_genomes_project 12 127364163 127364704 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0034650.1 MGP_CBAJ_G0019528.1 mouse_genomes_project 12 75876338 75895943 + MGP_CBAJ_P0034650 Tomm20l protein_coding protein_coding MGP_CBAJ_T0000009.1 MGP_CBAJ_G0000007.1 mouse_genomes_project 12 123982040 123987328 - MGP_CBAJ_P0000009 Ighg1 IG_C_gene IG_C_gene MGP_CBAJ_T0000010.1 MGP_CBAJ_G0000007.1 mouse_genomes_project 12 123985675 123987328 - MGP_CBAJ_P0000010 Ighg1 IG_C_gene IG_C_gene MGP_CBAJ_T0035093.1 MGP_CBAJ_G0019675.1 mouse_genomes_project 12 92124638 92128015 + MGP_CBAJ_P0035093 Fos protein_coding protein_coding MGP_CBAJ_T0035094.1 MGP_CBAJ_G0019675.1 mouse_genomes_project 12 92125439 92126927 + Fos protein_coding processed_transcript MGP_CBAJ_T0035095.1 MGP_CBAJ_G0019675.1 mouse_genomes_project 12 92125439 92126749 + Fos protein_coding processed_transcript MGP_CBAJ_T0035096.1 MGP_CBAJ_G0019675.1 mouse_genomes_project 12 92125659 92126805 + Fos protein_coding processed_transcript MGP_CBAJ_T0009684.1 MGP_CBAJ_G0007822.1 mouse_genomes_project 12 82057249 82057328 - Mir5135 miRNA miRNA MGP_CBAJ_T0034776.1 MGP_CBAJ_G0019573.1 mouse_genomes_project 12 81954273 81961050 + MGP_CBAJ_P0034776 Gm10451 protein_coding protein_coding MGP_CBAJ_T0034028.1 MGP_CBAJ_G0019298.1 mouse_genomes_project 12 2197492 2352902 + MGP_CBAJ_P0034028 Atad2b protein_coding protein_coding MGP_CBAJ_T0034029.1 MGP_CBAJ_G0019298.1 mouse_genomes_project 12 2197797 2356257 + MGP_CBAJ_P0034029 Atad2b protein_coding unknown_likely_coding MGP_CBAJ_T0034083.1 MGP_CBAJ_G0019319.1 mouse_genomes_project 12 9435622 9556604 - MGP_CBAJ_P0034083 Vsnl1 protein_coding protein_coding MGP_CBAJ_T0035266.1 MGP_CBAJ_G0019720.1 mouse_genomes_project 12 106672573 106838567 - MGP_CBAJ_P0035266 Kcnk10 protein_coding protein_coding MGP_CBAJ_T0000225.1 MGP_CBAJ_G0000170.1 mouse_genomes_project 12 124712450 124712747 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0033964.1 MGP_CBAJ_G0019278.1 mouse_genomes_project 12 896127 930908 + Dnmt3a protein_coding retained_intron MGP_CBAJ_T0033965.1 MGP_CBAJ_G0019278.1 mouse_genomes_project 12 896618 960247 + Dnmt3a protein_coding retained_intron MGP_CBAJ_T0033966.1 MGP_CBAJ_G0019278.1 mouse_genomes_project 12 896647 966137 + MGP_CBAJ_P0033966 Dnmt3a protein_coding protein_coding MGP_CBAJ_T0033967.1 MGP_CBAJ_G0019278.1 mouse_genomes_project 12 897150 1007255 + MGP_CBAJ_P0033967 Dnmt3a protein_coding protein_coding MGP_CBAJ_T0033968.1 MGP_CBAJ_G0019278.1 mouse_genomes_project 12 897178 989779 + MGP_CBAJ_P0033968 Dnmt3a protein_coding protein_coding MGP_CBAJ_T0033969.1 MGP_CBAJ_G0019278.1 mouse_genomes_project 12 897280 1006303 + MGP_CBAJ_P0033969 Dnmt3a protein_coding protein_coding MGP_CBAJ_T0033970.1 MGP_CBAJ_G0019278.1 mouse_genomes_project 12 942442 1000700 + MGP_CBAJ_P0033970 Dnmt3a protein_coding nonsense_mediated_decay MGP_CBAJ_T0033971.1 MGP_CBAJ_G0019278.1 mouse_genomes_project 12 953858 958994 + MGP_CBAJ_P0033971 Dnmt3a protein_coding protein_coding MGP_CBAJ_T0033972.1 MGP_CBAJ_G0019278.1 mouse_genomes_project 12 959022 968835 + MGP_CBAJ_P0033972 Dnmt3a protein_coding protein_coding MGP_CBAJ_T0033973.1 MGP_CBAJ_G0019278.1 mouse_genomes_project 12 978230 988905 + MGP_CBAJ_P0033973 Dnmt3a protein_coding protein_coding MGP_CBAJ_T0033974.1 MGP_CBAJ_G0019278.1 mouse_genomes_project 12 984511 1000655 + MGP_CBAJ_P0033974 Dnmt3a protein_coding protein_coding MGP_CBAJ_T0033975.1 MGP_CBAJ_G0019278.1 mouse_genomes_project 12 984527 1007255 + MGP_CBAJ_P0033975 Dnmt3a protein_coding protein_coding MGP_CBAJ_T0033976.1 MGP_CBAJ_G0019278.1 mouse_genomes_project 12 987607 988460 + MGP_CBAJ_P0033976 Dnmt3a protein_coding protein_coding MGP_CBAJ_T0033977.1 MGP_CBAJ_G0019278.1 mouse_genomes_project 12 987652 989760 + MGP_CBAJ_P0033977 Dnmt3a protein_coding protein_coding MGP_CBAJ_T0033978.1 MGP_CBAJ_G0019278.1 mouse_genomes_project 12 988376 990149 + MGP_CBAJ_P0033978 Dnmt3a protein_coding protein_coding MGP_CBAJ_T0033979.1 MGP_CBAJ_G0019278.1 mouse_genomes_project 12 990203 992454 + Dnmt3a protein_coding retained_intron MGP_CBAJ_T0033980.1 MGP_CBAJ_G0019278.1 mouse_genomes_project 12 993049 999606 + MGP_CBAJ_P0033980 Dnmt3a protein_coding nonsense_mediated_decay MGP_CBAJ_T0033981.1 MGP_CBAJ_G0019278.1 mouse_genomes_project 12 999629 1001360 + MGP_CBAJ_P0033981 Dnmt3a protein_coding protein_coding MGP_CBAJ_T0000073.1 MGP_CBAJ_G0000057.1 mouse_genomes_project 12 124933068 124939385 - MGP_CBAJ_P0000073 IG_V_gene IG_V_gene MGP_CBAJ_T0011209.1 MGP_CBAJ_G0009347.1 mouse_genomes_project 12 98378703 98379026 + Gm26477 misc_RNA misc_RNA MGP_CBAJ_T0100006.1 MGP_CBAJ_G0038261.1 mouse_genomes_project 12 87627340 87627461 + Gm24853 snoRNA snoRNA MGP_CBAJ_T0034584.1 MGP_CBAJ_G0019507.1 mouse_genomes_project 12 73825934 73879854 - MGP_CBAJ_P0034584 Nemf protein_coding protein_coding MGP_CBAJ_T0034879.1 MGP_CBAJ_G0019616.1 mouse_genomes_project 12 87534238 87543253 - MGP_CBAJ_P0034879 Adam4 protein_coding protein_coding MGP_CBAJ_T0009706.1 MGP_CBAJ_G0007844.1 mouse_genomes_project 12 118977264 118977360 + Mir345 miRNA miRNA MGP_CBAJ_T0006315.1 MGP_CBAJ_G0005257.1 mouse_genomes_project 12 32804720 32809716 + Gdap10 lincRNA lincRNA MGP_CBAJ_T0006296.1 MGP_CBAJ_G0005242.1 mouse_genomes_project 12 2709152 2757487 + 2810032G03Rik lincRNA lincRNA MGP_CBAJ_T0006297.1 MGP_CBAJ_G0005242.1 mouse_genomes_project 12 2752730 2757813 + 2810032G03Rik lincRNA lincRNA MGP_CBAJ_T0003353.1 MGP_CBAJ_G0003080.1 mouse_genomes_project 12 128793256 128906763 - Gm5441 antisense antisense MGP_CBAJ_T0003354.1 MGP_CBAJ_G0003080.1 mouse_genomes_project 12 128840298 128906773 - Gm5441 antisense antisense MGP_CBAJ_T0017053.1 MGP_CBAJ_G0014976.1 mouse_genomes_project 12 108679468 108687921 + Gm10433 processed_transcript processed_transcript MGP_CBAJ_T0017054.1 MGP_CBAJ_G0014976.1 mouse_genomes_project 12 108680273 108687126 + Gm10433 processed_transcript processed_transcript MGP_CBAJ_T0034653.1 MGP_CBAJ_G0019530.1 mouse_genomes_project 12 75909576 76018290 + MGP_CBAJ_P0034653 2700049A03Rik protein_coding protein_coding MGP_CBAJ_T0034654.1 MGP_CBAJ_G0019530.1 mouse_genomes_project 12 75909576 76018290 + MGP_CBAJ_P0034654 2700049A03Rik protein_coding protein_coding MGP_CBAJ_T0034655.1 MGP_CBAJ_G0019530.1 mouse_genomes_project 12 75923320 75933327 + MGP_CBAJ_P0034655 2700049A03Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0034656.1 MGP_CBAJ_G0019530.1 mouse_genomes_project 12 75948954 76018286 + MGP_CBAJ_P0034656 2700049A03Rik protein_coding protein_coding MGP_CBAJ_T0011198.1 MGP_CBAJ_G0009336.1 mouse_genomes_project 12 35221955 35222196 - Gm24359 misc_RNA misc_RNA MGP_CBAJ_T0034036.1 MGP_CBAJ_G0019302.1 mouse_genomes_project 12 6011510 6015531 - MGP_CBAJ_P0034036 Gdf7 protein_coding protein_coding MGP_CBAJ_T0009663.1 MGP_CBAJ_G0007801.1 mouse_genomes_project 12 16094818 16094901 + Mir3066 miRNA miRNA MGP_CBAJ_T0035427.1 MGP_CBAJ_G0019770.1 mouse_genomes_project 12 112631663 112642631 - MGP_CBAJ_P0035427 Serpina10 protein_coding protein_coding MGP_CBAJ_T0035428.1 MGP_CBAJ_G0019770.1 mouse_genomes_project 12 112633464 112642608 - MGP_CBAJ_P0035428 Serpina10 protein_coding protein_coding MGP_CBAJ_T0034599.1 MGP_CBAJ_G0019515.1 mouse_genomes_project 12 74391492 74491513 - Map4k5 protein_coding processed_transcript MGP_CBAJ_T0034600.1 MGP_CBAJ_G0019515.1 mouse_genomes_project 12 74391492 74491419 - MGP_CBAJ_P0034600 Map4k5 protein_coding protein_coding MGP_CBAJ_T0034601.1 MGP_CBAJ_G0019515.1 mouse_genomes_project 12 74391492 74491610 - MGP_CBAJ_P0034601 Map4k5 protein_coding protein_coding MGP_CBAJ_T0034602.1 MGP_CBAJ_G0019515.1 mouse_genomes_project 12 74391493 74491170 - MGP_CBAJ_P0034602 Map4k5 protein_coding unknown_likely_coding MGP_CBAJ_T0034603.1 MGP_CBAJ_G0019515.1 mouse_genomes_project 12 74391501 74491513 - MGP_CBAJ_P0034603 Map4k5 protein_coding protein_coding MGP_CBAJ_T0034604.1 MGP_CBAJ_G0019515.1 mouse_genomes_project 12 74391501 74491573 - MGP_CBAJ_P0034604 Map4k5 protein_coding protein_coding MGP_CBAJ_T0034605.1 MGP_CBAJ_G0019515.1 mouse_genomes_project 12 74391503 74406036 - Map4k5 protein_coding retained_intron MGP_CBAJ_T0034606.1 MGP_CBAJ_G0019515.1 mouse_genomes_project 12 74405364 74406441 - Map4k5 protein_coding processed_transcript MGP_CBAJ_T0034607.1 MGP_CBAJ_G0019515.1 mouse_genomes_project 12 74432454 74469772 - Map4k5 protein_coding retained_intron MGP_CBAJ_T0034608.1 MGP_CBAJ_G0019515.1 mouse_genomes_project 12 74436133 74491533 - Map4k5 protein_coding retained_intron MGP_CBAJ_T0034609.1 MGP_CBAJ_G0019515.1 mouse_genomes_project 12 74436603 74449016 - Map4k5 protein_coding retained_intron MGP_CBAJ_T0034544.1 MGP_CBAJ_G0019491.1 mouse_genomes_project 12 68976419 69006185 + MGP_CBAJ_P0034544 Prpf39 protein_coding protein_coding MGP_CBAJ_T0034545.1 MGP_CBAJ_G0019491.1 mouse_genomes_project 12 68976452 69006185 + MGP_CBAJ_P0034545 Prpf39 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034546.1 MGP_CBAJ_G0019491.1 mouse_genomes_project 12 68983778 69002256 + MGP_CBAJ_P0034546 Prpf39 protein_coding unknown_likely_coding MGP_CBAJ_T0035074.1 MGP_CBAJ_G0019666.1 mouse_genomes_project 12 91736386 91765740 + MGP_CBAJ_P0035074 Dlst protein_coding protein_coding MGP_CBAJ_T0000239.1 MGP_CBAJ_G0000184.1 mouse_genomes_project 12 125458187 125458480 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0035463.1 MGP_CBAJ_G0019789.1 mouse_genomes_project 12 114037995 114101948 - MGP_CBAJ_P0035463 Dicer1 protein_coding unknown_likely_coding MGP_CBAJ_T0097923.1 MGP_CBAJ_G0036196.1 mouse_genomes_project 12 46716904 46716988 + Gm22076 rRNA rRNA MGP_CBAJ_T0034384.1 MGP_CBAJ_G0019427.1 mouse_genomes_project 12 42494634 42531480 - MGP_CBAJ_P0034384 Lrrn3 protein_coding protein_coding MGP_CBAJ_T0034335.1 MGP_CBAJ_G0019416.1 mouse_genomes_project 12 37708032 38109343 + MGP_CBAJ_P0034335 Agmo protein_coding protein_coding MGP_CBAJ_T0034336.1 MGP_CBAJ_G0019416.1 mouse_genomes_project 12 37708131 37715695 + MGP_CBAJ_P0034336 Agmo protein_coding protein_coding MGP_CBAJ_T0034337.1 MGP_CBAJ_G0019416.1 mouse_genomes_project 12 37708160 37914376 + Agmo protein_coding retained_intron MGP_CBAJ_T0034338.1 MGP_CBAJ_G0019416.1 mouse_genomes_project 12 37708241 37931452 + MGP_CBAJ_P0034338 Agmo protein_coding nonsense_mediated_decay MGP_CBAJ_T0034339.1 MGP_CBAJ_G0019416.1 mouse_genomes_project 12 37708423 38089960 + MGP_CBAJ_P0034339 Agmo protein_coding protein_coding MGP_CBAJ_T0000071.1 MGP_CBAJ_G0000056.1 mouse_genomes_project 12 124910301 124910752 - MGP_CBAJ_P0000071 Ighv16-1 IG_V_gene IG_V_gene MGP_CBAJ_T0000072.1 MGP_CBAJ_G0000056.1 mouse_genomes_project 12 124910301 124910597 - MGP_CBAJ_P0000072 Ighv16-1 IG_V_gene IG_V_gene MGP_CBAJ_T0098781.1 MGP_CBAJ_G0037036.1 mouse_genomes_project 12 109307293 109307399 - Gm25801 snRNA snRNA MGP_CBAJ_T0099983.1 MGP_CBAJ_G0038238.1 mouse_genomes_project 12 36768839 36768949 - Gm25438 snoRNA snoRNA MGP_CBAJ_T0035251.1 MGP_CBAJ_G0019716.1 mouse_genomes_project 12 99267381 99310462 - MGP_CBAJ_P0035251 Sel1l protein_coding protein_coding MGP_CBAJ_T0035252.1 MGP_CBAJ_G0019716.1 mouse_genomes_project 12 99267381 99310462 - MGP_CBAJ_P0035252 Sel1l protein_coding protein_coding MGP_CBAJ_T0035253.1 MGP_CBAJ_G0019716.1 mouse_genomes_project 12 99267403 99275281 - Sel1l protein_coding processed_transcript MGP_CBAJ_T0035254.1 MGP_CBAJ_G0019716.1 mouse_genomes_project 12 99267952 99310434 - MGP_CBAJ_P0035254 Sel1l protein_coding protein_coding MGP_CBAJ_T0035255.1 MGP_CBAJ_G0019716.1 mouse_genomes_project 12 99269974 99310435 - Sel1l protein_coding retained_intron MGP_CBAJ_T0035256.1 MGP_CBAJ_G0019716.1 mouse_genomes_project 12 99276824 99279569 - Sel1l protein_coding retained_intron MGP_CBAJ_T0035257.1 MGP_CBAJ_G0019716.1 mouse_genomes_project 12 99281301 99310435 - Sel1l protein_coding retained_intron MGP_CBAJ_T0035258.1 MGP_CBAJ_G0019716.1 mouse_genomes_project 12 99286199 99293254 - Sel1l protein_coding retained_intron MGP_CBAJ_T0035259.1 MGP_CBAJ_G0019716.1 mouse_genomes_project 12 99293486 99310444 - Sel1l protein_coding retained_intron MGP_CBAJ_T0035260.1 MGP_CBAJ_G0019716.1 mouse_genomes_project 12 99302762 99310445 - Sel1l protein_coding retained_intron MGP_CBAJ_T0034500.1 MGP_CBAJ_G0019479.1 mouse_genomes_project 12 62123132 62143340 + MGP_CBAJ_P0034500 Gemin2 protein_coding protein_coding MGP_CBAJ_T0034501.1 MGP_CBAJ_G0019479.1 mouse_genomes_project 12 62123193 62143269 + Gemin2 protein_coding retained_intron MGP_CBAJ_T0034502.1 MGP_CBAJ_G0019479.1 mouse_genomes_project 12 62139539 62142757 + Gemin2 protein_coding retained_intron MGP_CBAJ_T0009760.1 MGP_CBAJ_G0007898.1 mouse_genomes_project 12 119923442 119923513 + Mir134 miRNA miRNA MGP_CBAJ_T0100034.1 MGP_CBAJ_G0038289.1 mouse_genomes_project 12 119872632 119872707 + Gm25856 snoRNA snoRNA MGP_CBAJ_T0034700.1 MGP_CBAJ_G0019545.1 mouse_genomes_project 12 78037912 78040812 - Six1 protein_coding processed_transcript MGP_CBAJ_T0034701.1 MGP_CBAJ_G0019545.1 mouse_genomes_project 12 78039823 78045176 - MGP_CBAJ_P0034701 Six1 protein_coding protein_coding MGP_CBAJ_T0034702.1 MGP_CBAJ_G0019545.1 mouse_genomes_project 12 78041527 78055345 - Six1 protein_coding processed_transcript MGP_CBAJ_T0034703.1 MGP_CBAJ_G0019545.1 mouse_genomes_project 12 78041770 78043288 - Six1 protein_coding processed_transcript MGP_CBAJ_T0098759.1 MGP_CBAJ_G0037014.1 mouse_genomes_project 12 58623070 58623173 - Gm22296 snRNA snRNA MGP_CBAJ_T0009687.1 MGP_CBAJ_G0007825.1 mouse_genomes_project 12 87259932 87260016 + Mir3067 miRNA miRNA MGP_CBAJ_T0035164.1 MGP_CBAJ_G0019693.1 mouse_genomes_project 12 94016599 94059080 - MGP_CBAJ_P0035164 Pomt2 protein_coding protein_coding MGP_CBAJ_T0000227.1 MGP_CBAJ_G0000172.1 mouse_genomes_project 12 124801980 124802411 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0034842.1 MGP_CBAJ_G0019601.1 mouse_genomes_project 12 86308165 86418445 - MGP_CBAJ_P0034842 Dcaf5 protein_coding protein_coding MGP_CBAJ_T0034169.1 MGP_CBAJ_G0019350.1 mouse_genomes_project 12 23765994 23789853 - MGP_CBAJ_P0034169 Cys1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034170.1 MGP_CBAJ_G0019350.1 mouse_genomes_project 12 23766004 23789835 - MGP_CBAJ_P0034170 Cys1 protein_coding protein_coding MGP_CBAJ_T0034171.1 MGP_CBAJ_G0019350.1 mouse_genomes_project 12 23766004 23789835 - MGP_CBAJ_P0034171 Cys1 protein_coding protein_coding MGP_CBAJ_T0034172.1 MGP_CBAJ_G0019350.1 mouse_genomes_project 12 23766109 23789061 - MGP_CBAJ_P0034172 Cys1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034173.1 MGP_CBAJ_G0019350.1 mouse_genomes_project 12 23766109 23789061 - MGP_CBAJ_P0034173 Cys1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034174.1 MGP_CBAJ_G0019350.1 mouse_genomes_project 12 23766710 23787975 - Cys1 protein_coding processed_transcript MGP_CBAJ_T0034175.1 MGP_CBAJ_G0019350.1 mouse_genomes_project 12 23766846 23788971 - MGP_CBAJ_P0034175 Cys1 protein_coding protein_coding MGP_CBAJ_T0034176.1 MGP_CBAJ_G0019350.1 mouse_genomes_project 12 23768660 23788757 - MGP_CBAJ_P0034176 Cys1 protein_coding protein_coding MGP_CBAJ_T0035367.1 MGP_CBAJ_G0019750.1 mouse_genomes_project 12 111441065 111592468 - MGP_CBAJ_P0035367 Itpk1 protein_coding protein_coding MGP_CBAJ_T0035368.1 MGP_CBAJ_G0019750.1 mouse_genomes_project 12 111456775 111466516 - Itpk1 protein_coding processed_transcript MGP_CBAJ_T0035369.1 MGP_CBAJ_G0019750.1 mouse_genomes_project 12 111460385 111516086 - MGP_CBAJ_P0035369 Itpk1 protein_coding protein_coding MGP_CBAJ_T0035370.1 MGP_CBAJ_G0019750.1 mouse_genomes_project 12 111495811 111592566 - MGP_CBAJ_P0035370 Itpk1 protein_coding protein_coding MGP_CBAJ_T0003335.1 MGP_CBAJ_G0003064.1 mouse_genomes_project 12 87617255 87622014 + Gm28370 antisense antisense MGP_CBAJ_T0035447.1 MGP_CBAJ_G0019778.1 mouse_genomes_project 12 113272811 113284251 + MGP_CBAJ_P0035447 Serpina3b protein_coding protein_coding MGP_CBAJ_T0035667.1 MGP_CBAJ_G0019854.1 mouse_genomes_project 12 122296223 122391265 - MGP_CBAJ_P0035667 Ppp1r13b protein_coding protein_coding MGP_CBAJ_T0035668.1 MGP_CBAJ_G0019854.1 mouse_genomes_project 12 122340761 122391250 - MGP_CBAJ_P0035668 Ppp1r13b protein_coding protein_coding MGP_CBAJ_T0034197.1 MGP_CBAJ_G0019361.1 mouse_genomes_project 12 28239879 28273437 - MGP_CBAJ_P0034197 Colec11 protein_coding protein_coding MGP_CBAJ_T0003336.1 MGP_CBAJ_G0003065.1 mouse_genomes_project 12 87718883 87720685 + Gm16572 antisense antisense MGP_CBAJ_T0006412.1 MGP_CBAJ_G0005320.1 mouse_genomes_project 12 121975318 121977409 - 2810029C07Rik lincRNA lincRNA MGP_CBAJ_T0003320.1 MGP_CBAJ_G0003053.1 mouse_genomes_project 12 59325438 59403345 + Gm26973 antisense antisense MGP_CBAJ_T0003321.1 MGP_CBAJ_G0003053.1 mouse_genomes_project 12 59329570 59367512 + Gm26973 antisense antisense MGP_CBAJ_T0003322.1 MGP_CBAJ_G0003053.1 mouse_genomes_project 12 59329621 59403382 + Gm26973 antisense antisense MGP_CBAJ_T0000007.1 MGP_CBAJ_G0000005.1 mouse_genomes_project 12 123932298 123933925 - MGP_CBAJ_P0000007 Ighg2c IG_C_gene IG_C_gene MGP_CBAJ_T0000103.1 MGP_CBAJ_G0000079.1 mouse_genomes_project 12 125468544 125468979 - MGP_CBAJ_P0000103 Ighv15-2 IG_V_gene IG_V_gene MGP_CBAJ_T0000104.1 MGP_CBAJ_G0000079.1 mouse_genomes_project 12 125468544 125468979 - MGP_CBAJ_P0000104 Ighv15-2 IG_V_gene IG_V_gene MGP_CBAJ_T0000229.1 MGP_CBAJ_G0000174.1 mouse_genomes_project 12 124928533 124928831 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0009723.1 MGP_CBAJ_G0007861.1 mouse_genomes_project 12 119782647 119782727 - Mir3071 miRNA miRNA MGP_CBAJ_T0034473.1 MGP_CBAJ_G0019471.1 mouse_genomes_project 12 59509640 60068587 - MGP_CBAJ_P0034473 Slc25a21 protein_coding protein_coding MGP_CBAJ_T0034474.1 MGP_CBAJ_G0019471.1 mouse_genomes_project 12 59510817 60028683 - MGP_CBAJ_P0034474 Slc25a21 protein_coding protein_coding MGP_CBAJ_T0034475.1 MGP_CBAJ_G0019471.1 mouse_genomes_project 12 59530356 59587587 - Slc25a21 protein_coding processed_transcript MGP_CBAJ_T0034476.1 MGP_CBAJ_G0019471.1 mouse_genomes_project 12 59585738 59827010 - Slc25a21 protein_coding retained_intron MGP_CBAJ_T0035143.1 MGP_CBAJ_G0019687.1 mouse_genomes_project 12 93575869 93613705 + MGP_CBAJ_P0035143 Lrrc74a protein_coding protein_coding MGP_CBAJ_T0034393.1 MGP_CBAJ_G0019431.1 mouse_genomes_project 12 46154803 46402727 - MGP_CBAJ_P0034393 Stxbp6 protein_coding protein_coding MGP_CBAJ_T0034394.1 MGP_CBAJ_G0019431.1 mouse_genomes_project 12 46157537 46403108 - MGP_CBAJ_P0034394 Stxbp6 protein_coding protein_coding MGP_CBAJ_T0034395.1 MGP_CBAJ_G0019431.1 mouse_genomes_project 12 46165887 46337233 - Stxbp6 protein_coding processed_transcript MGP_CBAJ_T0034396.1 MGP_CBAJ_G0019431.1 mouse_genomes_project 12 46206504 46402769 - MGP_CBAJ_P0034396 Stxbp6 protein_coding protein_coding MGP_CBAJ_T0034397.1 MGP_CBAJ_G0019431.1 mouse_genomes_project 12 46337200 46402933 - MGP_CBAJ_P0034397 Stxbp6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035436.1 MGP_CBAJ_G0019774.1 mouse_genomes_project 12 113058063 113071675 - MGP_CBAJ_P0035436 Serpina11 protein_coding protein_coding MGP_CBAJ_T0035437.1 MGP_CBAJ_G0019774.1 mouse_genomes_project 12 113058075 113071645 - MGP_CBAJ_P0035437 Serpina11 protein_coding protein_coding MGP_CBAJ_T0035438.1 MGP_CBAJ_G0019774.1 mouse_genomes_project 12 113062477 113071637 - MGP_CBAJ_P0035438 Serpina11 protein_coding protein_coding MGP_CBAJ_T0035439.1 MGP_CBAJ_G0019774.1 mouse_genomes_project 12 113062563 113071635 - MGP_CBAJ_P0035439 Serpina11 protein_coding protein_coding MGP_CBAJ_T0035440.1 MGP_CBAJ_G0019774.1 mouse_genomes_project 12 113063702 113071659 - Serpina11 protein_coding processed_transcript MGP_CBAJ_T0035207.1 MGP_CBAJ_G0019707.1 mouse_genomes_project 12 94555856 94570694 + MGP_CBAJ_P0035207 Oog1 protein_coding protein_coding MGP_CBAJ_T0034574.1 MGP_CBAJ_G0019503.1 mouse_genomes_project 12 73686633 73689291 + MGP_CBAJ_P0034574 9330151L19Rik protein_coding protein_coding MGP_CBAJ_T0034150.1 MGP_CBAJ_G0019343.1 mouse_genomes_project 12 20272289 20306554 + MGP_CBAJ_P0034150 Cpsf3 protein_coding protein_coding MGP_CBAJ_T0034162.1 MGP_CBAJ_G0019347.1 mouse_genomes_project 12 23559435 23559886 - MGP_CBAJ_P0034162 Gm16372 protein_coding protein_coding MGP_CBAJ_T0009696.1 MGP_CBAJ_G0007834.1 mouse_genomes_project 12 99250615 99250680 - Gm22015 miRNA miRNA MGP_CBAJ_T0009780.1 MGP_CBAJ_G0007918.1 mouse_genomes_project 12 123301906 123301976 + Mir6940 miRNA miRNA MGP_CBAJ_T0034226.1 MGP_CBAJ_G0019372.1 mouse_genomes_project 12 30669016 30678685 + MGP_CBAJ_P0034226 Fam150b protein_coding protein_coding MGP_CBAJ_T0000236.1 MGP_CBAJ_G0000181.1 mouse_genomes_project 12 125317492 125317953 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0035350.1 MGP_CBAJ_G0019744.1 mouse_genomes_project 12 110766831 110798523 + MGP_CBAJ_P0035350 Cpsf2 protein_coding protein_coding MGP_CBAJ_T0017055.1 MGP_CBAJ_G0014977.1 mouse_genomes_project 12 110696287 110698381 + Gm20036 processed_transcript processed_transcript MGP_CBAJ_T0003350.1 MGP_CBAJ_G0003077.1 mouse_genomes_project 12 112300026 112315051 + Gm15523 antisense antisense MGP_CBAJ_T0000093.1 MGP_CBAJ_G0000070.1 mouse_genomes_project 12 125237531 125285383 - MGP_CBAJ_P0000093 Ighv6-6 IG_V_gene IG_V_gene MGP_CBAJ_T0098784.1 MGP_CBAJ_G0037039.1 mouse_genomes_project 12 123838056 123838160 + Gm25622 snRNA snRNA MGP_CBAJ_T0009659.1 MGP_CBAJ_G0007797.1 mouse_genomes_project 12 772074 772137 + Gm26050 miRNA miRNA MGP_CBAJ_T0034378.1 MGP_CBAJ_G0019425.1 mouse_genomes_project 12 41384850 41815284 + MGP_CBAJ_P0034378 Dock4 protein_coding protein_coding MGP_CBAJ_T0034687.1 MGP_CBAJ_G0019540.1 mouse_genomes_project 12 77545990 77559126 - MGP_CBAJ_P0034687 unknown_likely_coding unknown_likely_coding MGP_CBAJ_T0006300.1 MGP_CBAJ_G0005245.1 mouse_genomes_project 12 6670337 6674610 - 9930038B18Rik lincRNA lincRNA MGP_CBAJ_T0034430.1 MGP_CBAJ_G0019449.1 mouse_genomes_project 12 55551866 56443940 + MGP_CBAJ_P0034430 Npas3 protein_coding protein_coding MGP_CBAJ_T0034431.1 MGP_CBAJ_G0019449.1 mouse_genomes_project 12 55551866 56443941 + MGP_CBAJ_P0034431 Npas3 protein_coding unknown_likely_coding MGP_CBAJ_T0035480.1 MGP_CBAJ_G0019800.1 mouse_genomes_project 12 115140524 115175906 + MGP_CBAJ_P0035480 Bdkrb2 protein_coding protein_coding MGP_CBAJ_T0009677.1 MGP_CBAJ_G0007815.1 mouse_genomes_project 12 73638842 73638912 + miRNA miRNA MGP_CBAJ_T0035692.1 MGP_CBAJ_G0019865.1 mouse_genomes_project 12 123208375 123212707 + MGP_CBAJ_P0035692 Siva1 protein_coding protein_coding MGP_CBAJ_T0035693.1 MGP_CBAJ_G0019865.1 mouse_genomes_project 12 123208375 123212707 + MGP_CBAJ_P0035693 Siva1 protein_coding protein_coding MGP_CBAJ_T0035635.1 MGP_CBAJ_G0019845.1 mouse_genomes_project 12 121931502 121939760 + MGP_CBAJ_P0035635 Eif5 protein_coding protein_coding MGP_CBAJ_T0035636.1 MGP_CBAJ_G0019845.1 mouse_genomes_project 12 121931931 121938170 + MGP_CBAJ_P0035636 Eif5 protein_coding protein_coding MGP_CBAJ_T0034867.1 MGP_CBAJ_G0019611.1 mouse_genomes_project 12 87093932 87279354 + MGP_CBAJ_P0034867 Smoc1 protein_coding protein_coding MGP_CBAJ_T0034868.1 MGP_CBAJ_G0019611.1 mouse_genomes_project 12 87093952 87279350 + MGP_CBAJ_P0034868 Smoc1 protein_coding protein_coding MGP_CBAJ_T0034869.1 MGP_CBAJ_G0019611.1 mouse_genomes_project 12 87093952 87279350 + MGP_CBAJ_P0034869 Smoc1 protein_coding protein_coding MGP_CBAJ_T0034182.1 MGP_CBAJ_G0019353.1 mouse_genomes_project 12 24112419 24202649 + MGP_CBAJ_P0034182 Kidins220 protein_coding protein_coding MGP_CBAJ_T0034183.1 MGP_CBAJ_G0019353.1 mouse_genomes_project 12 24112421 24200791 + MGP_CBAJ_P0034183 Kidins220 protein_coding unknown_likely_coding MGP_CBAJ_T0034312.1 MGP_CBAJ_G0019402.1 mouse_genomes_project 12 35206691 35208367 + MGP_CBAJ_P0034312 Prps1l1 protein_coding protein_coding MGP_CBAJ_T0009725.1 MGP_CBAJ_G0007863.1 mouse_genomes_project 12 119798839 119798935 + Mir341 miRNA miRNA MGP_CBAJ_T0099998.1 MGP_CBAJ_G0038253.1 mouse_genomes_project 12 68997348 68997434 + Gm25970 snoRNA snoRNA MGP_CBAJ_T0000828.1 MGP_CBAJ_G0000764.1 mouse_genomes_project 12 89423520 89424322 - TEC TEC MGP_CBAJ_T0035646.1 MGP_CBAJ_G0019850.1 mouse_genomes_project 12 122132192 122206800 + MGP_CBAJ_P0035646 Apopt1 protein_coding protein_coding MGP_CBAJ_T0035647.1 MGP_CBAJ_G0019850.1 mouse_genomes_project 12 122132192 122203492 + MGP_CBAJ_P0035647 Apopt1 protein_coding protein_coding MGP_CBAJ_T0035648.1 MGP_CBAJ_G0019850.1 mouse_genomes_project 12 122132196 122155846 + MGP_CBAJ_P0035648 Apopt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035649.1 MGP_CBAJ_G0019850.1 mouse_genomes_project 12 122132198 122160019 + MGP_CBAJ_P0035649 Apopt1 protein_coding protein_coding MGP_CBAJ_T0100039.1 MGP_CBAJ_G0038294.1 mouse_genomes_project 12 121934206 121934333 + Snora28 snoRNA snoRNA MGP_CBAJ_T0000242.1 MGP_CBAJ_G0000187.1 mouse_genomes_project 12 125560357 125560842 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0034576.1 MGP_CBAJ_G0019505.1 mouse_genomes_project 12 73730325 73731787 + Klhdc1 protein_coding processed_transcript MGP_CBAJ_T0034577.1 MGP_CBAJ_G0019505.1 mouse_genomes_project 12 73730978 73785643 + MGP_CBAJ_P0034577 Klhdc1 protein_coding protein_coding MGP_CBAJ_T0034578.1 MGP_CBAJ_G0019505.1 mouse_genomes_project 12 73731060 73731789 + Klhdc1 protein_coding processed_transcript MGP_CBAJ_T0034579.1 MGP_CBAJ_G0019505.1 mouse_genomes_project 12 73731064 73784330 + MGP_CBAJ_P0034579 Klhdc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034804.1 MGP_CBAJ_G0019582.1 mouse_genomes_project 12 83265439 83267269 - MGP_CBAJ_P0034804 protein_coding protein_coding MGP_CBAJ_T0034233.1 MGP_CBAJ_G0019375.1 mouse_genomes_project 12 30875281 30881110 + MGP_CBAJ_P0034233 Fam110c protein_coding protein_coding MGP_CBAJ_T0035361.1 MGP_CBAJ_G0019747.1 mouse_genomes_project 12 111245960 111276883 - MGP_CBAJ_P0035361 Lgmn protein_coding protein_coding MGP_CBAJ_T0035362.1 MGP_CBAJ_G0019747.1 mouse_genomes_project 12 111245974 111292341 - MGP_CBAJ_P0035362 Lgmn protein_coding protein_coding MGP_CBAJ_T0035363.1 MGP_CBAJ_G0019747.1 mouse_genomes_project 12 111251983 111262916 - Lgmn protein_coding retained_intron MGP_CBAJ_T0034184.1 MGP_CBAJ_G0019354.1 mouse_genomes_project 12 24249192 24251485 - MGP_CBAJ_P0034184 Id2 protein_coding protein_coding MGP_CBAJ_T0006329.1 MGP_CBAJ_G0005267.1 mouse_genomes_project 12 74891516 74898059 + F730035M05Rik lincRNA lincRNA MGP_CBAJ_T0099971.1 MGP_CBAJ_G0038226.1 mouse_genomes_project 12 10214453 10214582 + Gm25610 snoRNA snoRNA MGP_CBAJ_T0035582.1 MGP_CBAJ_G0019828.1 mouse_genomes_project 12 120977389 120995542 - MGP_CBAJ_P0035582 1700001K19Rik protein_coding protein_coding MGP_CBAJ_T0006343.1 MGP_CBAJ_G0005277.1 mouse_genomes_project 12 86969767 86970785 - 1700052I22Rik lincRNA lincRNA MGP_CBAJ_T0035470.1 MGP_CBAJ_G0019795.1 mouse_genomes_project 12 114659256 114663989 + MGP_CBAJ_P0035470 Tcl1b1 protein_coding protein_coding MGP_CBAJ_T0034360.1 MGP_CBAJ_G0019420.1 mouse_genomes_project 12 40946200 41041582 - MGP_CBAJ_P0034360 Scin protein_coding protein_coding MGP_CBAJ_T0034361.1 MGP_CBAJ_G0019420.1 mouse_genomes_project 12 40946204 41041627 - MGP_CBAJ_P0034361 Scin protein_coding protein_coding MGP_CBAJ_T0011195.1 MGP_CBAJ_G0009333.1 mouse_genomes_project 12 9833634 9833942 - Gm23781 misc_RNA misc_RNA MGP_CBAJ_T0000248.1 MGP_CBAJ_G0000193.1 mouse_genomes_project 12 126549586 126549880 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0000120.1 MGP_CBAJ_G0000090.1 mouse_genomes_project 12 127329706 127330000 - MGP_CBAJ_P0000120 Ighv1-78 IG_V_gene IG_V_gene MGP_CBAJ_T0000121.1 MGP_CBAJ_G0000090.1 mouse_genomes_project 12 127329706 127330161 - MGP_CBAJ_P0000121 Ighv1-78 IG_V_gene IG_V_gene MGP_CBAJ_T0035052.1 MGP_CBAJ_G0019661.1 mouse_genomes_project 12 91476228 91478592 + MGP_CBAJ_P0035052 D030025P21Rik protein_coding protein_coding MGP_CBAJ_T0035468.1 MGP_CBAJ_G0019793.1 mouse_genomes_project 12 114417568 114429997 + MGP_CBAJ_P0035468 Glrx5 protein_coding protein_coding MGP_CBAJ_T0098749.1 MGP_CBAJ_G0037004.1 mouse_genomes_project 12 50872753 50872860 + Gm26454 snRNA snRNA MGP_CBAJ_T0003343.1 MGP_CBAJ_G0003072.1 mouse_genomes_project 12 99132396 99143039 + Gm16876 antisense antisense MGP_CBAJ_T0034260.1 MGP_CBAJ_G0019385.1 mouse_genomes_project 12 31531890 31844800 + MGP_CBAJ_P0034260 Cog5 protein_coding protein_coding MGP_CBAJ_T0034264.1 MGP_CBAJ_G0019385.1 mouse_genomes_project 12 31652189 31829749 + MGP_CBAJ_P0034264 Cog5 protein_coding unknown_likely_coding MGP_CBAJ_T0034152.1 MGP_CBAJ_G0019345.1 mouse_genomes_project 12 20315004 20374192 - MGP_CBAJ_P0034152 Adam17 protein_coding protein_coding MGP_CBAJ_T0034153.1 MGP_CBAJ_G0019345.1 mouse_genomes_project 12 20315012 20374231 - MGP_CBAJ_P0034153 Adam17 protein_coding protein_coding MGP_CBAJ_T0034154.1 MGP_CBAJ_G0019345.1 mouse_genomes_project 12 20315012 20374192 - MGP_CBAJ_P0034154 Adam17 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034155.1 MGP_CBAJ_G0019345.1 mouse_genomes_project 12 20315012 20374192 - MGP_CBAJ_P0034155 Adam17 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034156.1 MGP_CBAJ_G0019345.1 mouse_genomes_project 12 20317020 20320808 - Adam17 protein_coding processed_transcript MGP_CBAJ_T0034157.1 MGP_CBAJ_G0019345.1 mouse_genomes_project 12 20319505 20339077 - Adam17 protein_coding retained_intron MGP_CBAJ_T0034158.1 MGP_CBAJ_G0019345.1 mouse_genomes_project 12 20321590 20324037 - Adam17 protein_coding retained_intron MGP_CBAJ_T0034159.1 MGP_CBAJ_G0019345.1 mouse_genomes_project 12 20346314 20374133 - MGP_CBAJ_P0034159 Adam17 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034632.1 MGP_CBAJ_G0019523.1 mouse_genomes_project 12 75133214 75150956 + MGP_CBAJ_P0034632 Tmx1 protein_coding protein_coding MGP_CBAJ_T0034633.1 MGP_CBAJ_G0019523.1 mouse_genomes_project 12 75136143 75149169 + MGP_CBAJ_P0034633 Tmx1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034634.1 MGP_CBAJ_G0019523.1 mouse_genomes_project 12 75139941 75140677 + Tmx1 protein_coding retained_intron MGP_CBAJ_T0006342.1 MGP_CBAJ_G0005276.1 mouse_genomes_project 12 86927313 86931104 - lincRNA lincRNA MGP_CBAJ_T0000128.1 MGP_CBAJ_G0000097.1 mouse_genomes_project 12 127471347 127471801 - MGP_CBAJ_P0000128 IG_V_gene IG_V_gene MGP_CBAJ_T0035721.1 MGP_CBAJ_G0019878.1 mouse_genomes_project 12 123592270 123594224 + MGP_CBAJ_P0035721 9230104M06Rik protein_coding protein_coding MGP_CBAJ_T0035596.1 MGP_CBAJ_G0019831.1 mouse_genomes_project 12 121139354 121184041 - Mok protein_coding retained_intron MGP_CBAJ_T0035597.1 MGP_CBAJ_G0019831.1 mouse_genomes_project 12 121139354 121184032 - MGP_CBAJ_P0035597 Mok protein_coding protein_coding MGP_CBAJ_T0035598.1 MGP_CBAJ_G0019831.1 mouse_genomes_project 12 121139354 121184041 - MGP_CBAJ_P0035598 Mok protein_coding protein_coding MGP_CBAJ_T0035599.1 MGP_CBAJ_G0019831.1 mouse_genomes_project 12 121139597 121183854 - MGP_CBAJ_P0035599 Mok protein_coding unknown_likely_coding MGP_CBAJ_T0035600.1 MGP_CBAJ_G0019831.1 mouse_genomes_project 12 121146398 121184029 - MGP_CBAJ_P0035600 Mok protein_coding protein_coding MGP_CBAJ_T0035778.1 MGP_CBAJ_G0019896.1 mouse_genomes_project 12 129503947 129698650 - MGP_CBAJ_P0035778 Dnah11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035779.1 MGP_CBAJ_G0019896.1 mouse_genomes_project 12 129503947 129873202 - MGP_CBAJ_P0035779 Dnah11 protein_coding protein_coding MGP_CBAJ_T0035780.1 MGP_CBAJ_G0019896.1 mouse_genomes_project 12 129528091 129542388 - Dnah11 protein_coding retained_intron MGP_CBAJ_T0035781.1 MGP_CBAJ_G0019896.1 mouse_genomes_project 12 129528107 129542617 - Dnah11 protein_coding processed_transcript MGP_CBAJ_T0000112.1 MGP_CBAJ_G0000084.1 mouse_genomes_project 12 126010268 126010741 - MGP_CBAJ_P0000112 Ighv1-47 IG_V_gene IG_V_gene MGP_CBAJ_T0000113.1 MGP_CBAJ_G0000084.1 mouse_genomes_project 12 126010268 126010562 - MGP_CBAJ_P0000113 Ighv1-47 IG_V_gene IG_V_gene MGP_CBAJ_T0034376.1 MGP_CBAJ_G0019424.1 mouse_genomes_project 12 41258356 41384588 - MGP_CBAJ_P0034376 Zfp277 protein_coding protein_coding MGP_CBAJ_T0034377.1 MGP_CBAJ_G0019424.1 mouse_genomes_project 12 41258868 41384567 - MGP_CBAJ_P0034377 Zfp277 protein_coding protein_coding MGP_CBAJ_T0099980.1 MGP_CBAJ_G0038235.1 mouse_genomes_project 12 31066291 31066421 - Gm24613 snoRNA snoRNA MGP_CBAJ_T0012651.1 MGP_CBAJ_G0010763.1 mouse_genomes_project 12 64808571 64809544 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0035053.1 MGP_CBAJ_G0019662.1 mouse_genomes_project 12 91521789 91585743 - MGP_CBAJ_P0035053 Arel1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035054.1 MGP_CBAJ_G0019662.1 mouse_genomes_project 12 91521791 91585819 - MGP_CBAJ_P0035054 Arel1 protein_coding protein_coding MGP_CBAJ_T0035055.1 MGP_CBAJ_G0019662.1 mouse_genomes_project 12 91543987 91557976 - MGP_CBAJ_P0035055 Arel1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035056.1 MGP_CBAJ_G0019662.1 mouse_genomes_project 12 91551964 91561521 - MGP_CBAJ_P0035056 Arel1 protein_coding protein_coding MGP_CBAJ_T0035057.1 MGP_CBAJ_G0019662.1 mouse_genomes_project 12 91553564 91559996 - MGP_CBAJ_P0035057 Arel1 protein_coding protein_coding MGP_CBAJ_T0035058.1 MGP_CBAJ_G0019662.1 mouse_genomes_project 12 91553585 91585775 - MGP_CBAJ_P0035058 Arel1 protein_coding protein_coding MGP_CBAJ_T0035059.1 MGP_CBAJ_G0019662.1 mouse_genomes_project 12 91553594 91585757 - MGP_CBAJ_P0035059 Arel1 protein_coding protein_coding MGP_CBAJ_T0035060.1 MGP_CBAJ_G0019662.1 mouse_genomes_project 12 91565679 91580949 - Arel1 protein_coding processed_transcript MGP_CBAJ_T0000034.1 MGP_CBAJ_G0000027.1 mouse_genomes_project 12 124100276 124100324 - MGP_CBAJ_P0000034 Ighj2 IG_J_gene IG_J_gene MGP_CBAJ_T0000035.1 MGP_CBAJ_G0000027.1 mouse_genomes_project 12 124100322 124100376 - Ighj2 IG_J_gene processed_transcript MGP_CBAJ_T0101572.1 MGP_CBAJ_G0039604.1 mouse_genomes_project 12 50764034 50766262 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0006360.1 MGP_CBAJ_G0005294.1 mouse_genomes_project 12 111613400 111623308 - Gm21971 lincRNA lincRNA MGP_CBAJ_T0035396.1 MGP_CBAJ_G0019761.1 mouse_genomes_project 12 112274089 112280179 + MGP_CBAJ_P0035396 Fam181a protein_coding protein_coding MGP_CBAJ_T0035397.1 MGP_CBAJ_G0019761.1 mouse_genomes_project 12 112278067 112279433 + MGP_CBAJ_P0035397 Fam181a protein_coding protein_coding MGP_CBAJ_T0035398.1 MGP_CBAJ_G0019761.1 mouse_genomes_project 12 112278073 112280179 + MGP_CBAJ_P0035398 Fam181a protein_coding protein_coding MGP_CBAJ_T0034492.1 MGP_CBAJ_G0019476.1 mouse_genomes_project 12 61212709 61214826 + MGP_CBAJ_P0034492 Sstr1 protein_coding protein_coding MGP_CBAJ_T0034493.1 MGP_CBAJ_G0019476.1 mouse_genomes_project 12 61212741 61215379 + MGP_CBAJ_P0034493 Sstr1 protein_coding protein_coding MGP_CBAJ_T0009676.1 MGP_CBAJ_G0007814.1 mouse_genomes_project 12 62382747 62382817 - Gm27284 miRNA miRNA MGP_CBAJ_T0012665.1 MGP_CBAJ_G0010777.1 mouse_genomes_project 12 88755927 88756170 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0034495.1 MGP_CBAJ_G0019478.1 mouse_genomes_project 12 62055526 62121762 - MGP_CBAJ_P0034495 Sec23a protein_coding protein_coding MGP_CBAJ_T0034496.1 MGP_CBAJ_G0019478.1 mouse_genomes_project 12 62056847 62116980 - MGP_CBAJ_P0034496 Sec23a protein_coding protein_coding MGP_CBAJ_T0034497.1 MGP_CBAJ_G0019478.1 mouse_genomes_project 12 62063748 62070052 - Sec23a protein_coding retained_intron MGP_CBAJ_T0034498.1 MGP_CBAJ_G0019478.1 mouse_genomes_project 12 62071768 62090298 - Sec23a protein_coding retained_intron MGP_CBAJ_T0034499.1 MGP_CBAJ_G0019478.1 mouse_genomes_project 12 62116398 62121762 - Sec23a protein_coding retained_intron MGP_CBAJ_T0034362.1 MGP_CBAJ_G0019421.1 mouse_genomes_project 12 41095752 41128564 - MGP_CBAJ_P0034362 Lsmem1 protein_coding protein_coding MGP_CBAJ_T0098787.1 MGP_CBAJ_G0037042.1 mouse_genomes_project 12 130208775 130208882 - Gm25577 snRNA snRNA MGP_CBAJ_T0000028.1 MGP_CBAJ_G0000021.1 mouse_genomes_project 12 124208063 124208086 - MGP_CBAJ_P0000028 Gm16968 IG_D_gene IG_D_gene MGP_CBAJ_T0009751.1 MGP_CBAJ_G0007889.1 mouse_genomes_project 12 119913070 119913138 + Mir376a miRNA miRNA MGP_CBAJ_T0034637.1 MGP_CBAJ_G0019525.1 mouse_genomes_project 12 75659704 75698538 + MGP_CBAJ_P0034637 Actr10 protein_coding protein_coding MGP_CBAJ_T0035273.1 MGP_CBAJ_G0019722.1 mouse_genomes_project 12 106947430 107020098 - MGP_CBAJ_P0035273 Ptpn21 protein_coding protein_coding MGP_CBAJ_T0035274.1 MGP_CBAJ_G0019722.1 mouse_genomes_project 12 106947430 107022858 - MGP_CBAJ_P0035274 Ptpn21 protein_coding protein_coding MGP_CBAJ_T0017056.1 MGP_CBAJ_G0014978.1 mouse_genomes_project 12 111556712 111623319 - Gm28373 processed_transcript processed_transcript MGP_CBAJ_T0006338.1 MGP_CBAJ_G0005272.1 mouse_genomes_project 12 86045904 86055043 + lincRNA lincRNA MGP_CBAJ_T0035172.1 MGP_CBAJ_G0019697.1 mouse_genomes_project 12 94134772 94147053 - MGP_CBAJ_P0035172 Noxred1 protein_coding protein_coding MGP_CBAJ_T0006407.1 MGP_CBAJ_G0005316.1 mouse_genomes_project 12 121184130 121186906 + 4921507G05Rik lincRNA lincRNA MGP_CBAJ_T0035484.1 MGP_CBAJ_G0019802.1 mouse_genomes_project 12 115196151 115270635 - MGP_CBAJ_P0035484 Atg2b protein_coding protein_coding MGP_CBAJ_T0035485.1 MGP_CBAJ_G0019802.1 mouse_genomes_project 12 115196156 115270224 - MGP_CBAJ_P0035485 Atg2b protein_coding unknown_likely_coding MGP_CBAJ_T0034082.1 MGP_CBAJ_G0019318.1 mouse_genomes_project 12 9363358 9425501 + MGP_CBAJ_P0034082 Smc6 protein_coding protein_coding MGP_CBAJ_T0034677.1 MGP_CBAJ_G0019538.1 mouse_genomes_project 12 77338288 77417206 + MGP_CBAJ_P0034677 Lrrc9 protein_coding protein_coding MGP_CBAJ_T0034678.1 MGP_CBAJ_G0019538.1 mouse_genomes_project 12 77338355 77403878 + MGP_CBAJ_P0034678 Lrrc9 protein_coding protein_coding MGP_CBAJ_T0034679.1 MGP_CBAJ_G0019538.1 mouse_genomes_project 12 77338371 77369495 + Lrrc9 protein_coding retained_intron MGP_CBAJ_T0034680.1 MGP_CBAJ_G0019538.1 mouse_genomes_project 12 77338457 77420975 + Lrrc9 protein_coding processed_transcript MGP_CBAJ_T0034681.1 MGP_CBAJ_G0019538.1 mouse_genomes_project 12 77338664 77354457 + Lrrc9 protein_coding retained_intron MGP_CBAJ_T0034682.1 MGP_CBAJ_G0019538.1 mouse_genomes_project 12 77338671 77378616 + Lrrc9 protein_coding retained_intron MGP_CBAJ_T0034683.1 MGP_CBAJ_G0019538.1 mouse_genomes_project 12 77338797 77420920 + MGP_CBAJ_P0034683 Lrrc9 protein_coding unknown_likely_coding MGP_CBAJ_T0034684.1 MGP_CBAJ_G0019538.1 mouse_genomes_project 12 77338803 77419024 + MGP_CBAJ_P0034684 Lrrc9 protein_coding unknown_likely_coding MGP_CBAJ_T0034685.1 MGP_CBAJ_G0019538.1 mouse_genomes_project 12 77380479 77382067 + Lrrc9 protein_coding retained_intron MGP_CBAJ_T0009718.1 MGP_CBAJ_G0007856.1 mouse_genomes_project 12 119778103 119778194 + Mir431 miRNA miRNA MGP_CBAJ_T0003326.1 MGP_CBAJ_G0003057.1 mouse_genomes_project 12 73764691 73775030 - antisense antisense MGP_CBAJ_T0009757.1 MGP_CBAJ_G0007895.1 mouse_genomes_project 12 119918109 119918232 + Gm27379 miRNA miRNA MGP_CBAJ_T0034011.1 MGP_CBAJ_G0019292.1 mouse_genomes_project 12 2041435 2050454 + MGP_CBAJ_P0034011 Pfn4 protein_coding protein_coding MGP_CBAJ_T0034012.1 MGP_CBAJ_G0019292.1 mouse_genomes_project 12 2041595 2050426 + MGP_CBAJ_P0034012 Pfn4 protein_coding protein_coding MGP_CBAJ_T0006303.1 MGP_CBAJ_G0005248.1 mouse_genomes_project 12 11103246 11109560 + Platr19 lincRNA lincRNA MGP_CBAJ_T0099995.1 MGP_CBAJ_G0038250.1 mouse_genomes_project 12 62848075 62848206 - Gm24377 snoRNA snoRNA MGP_CBAJ_T0035043.1 MGP_CBAJ_G0019658.1 mouse_genomes_project 12 91346991 91365511 - MGP_CBAJ_P0035043 Npc2 protein_coding protein_coding MGP_CBAJ_T0034185.1 MGP_CBAJ_G0019355.1 mouse_genomes_project 12 25587863 25707506 - MGP_CBAJ_P0034185 Rnf144a protein_coding protein_coding MGP_CBAJ_T0034186.1 MGP_CBAJ_G0019355.1 mouse_genomes_project 12 25587863 25707506 - MGP_CBAJ_P0034186 Rnf144a protein_coding protein_coding MGP_CBAJ_T0009715.1 MGP_CBAJ_G0007853.1 mouse_genomes_project 12 119773912 119774006 + Mir665 miRNA miRNA MGP_CBAJ_T0000057.1 MGP_CBAJ_G0000045.1 mouse_genomes_project 12 124655555 124656030 - MGP_CBAJ_P0000057 Ighv5-15 IG_V_gene IG_V_gene MGP_CBAJ_T0000058.1 MGP_CBAJ_G0000045.1 mouse_genomes_project 12 124655555 124656038 - MGP_CBAJ_P0000058 Ighv5-15 IG_V_gene IG_V_gene MGP_CBAJ_T0034243.1 MGP_CBAJ_G0019379.1 mouse_genomes_project 12 31214290 31284296 + MGP_CBAJ_P0034243 Slc26a3 protein_coding protein_coding MGP_CBAJ_T0034245.1 MGP_CBAJ_G0019379.1 mouse_genomes_project 12 31271586 31306584 + MGP_CBAJ_P0034245 Slc26a3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034246.1 MGP_CBAJ_G0019379.1 mouse_genomes_project 12 31271588 31307006 + MGP_CBAJ_P0034246 Slc26a3 protein_coding protein_coding MGP_CBAJ_T0034247.1 MGP_CBAJ_G0019379.1 mouse_genomes_project 12 31271588 31286180 + MGP_CBAJ_P0034247 Slc26a3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034248.1 MGP_CBAJ_G0019379.1 mouse_genomes_project 12 31271602 31286201 + Slc26a3 protein_coding retained_intron MGP_CBAJ_T0034249.1 MGP_CBAJ_G0019379.1 mouse_genomes_project 12 31280781 31288382 + Slc26a3 protein_coding retained_intron MGP_CBAJ_T0034250.1 MGP_CBAJ_G0019379.1 mouse_genomes_project 12 31303994 31304940 + MGP_CBAJ_P0034250 Slc26a3 protein_coding protein_coding MGP_CBAJ_T0012654.1 MGP_CBAJ_G0010766.1 mouse_genomes_project 12 66784909 66785206 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0035449.1 MGP_CBAJ_G0019780.1 mouse_genomes_project 12 113379932 113386967 + MGP_CBAJ_P0035449 protein_coding protein_coding MGP_CBAJ_T0035450.1 MGP_CBAJ_G0019780.1 mouse_genomes_project 12 113385571 113483210 + MGP_CBAJ_P0035450 protein_coding protein_coding MGP_CBAJ_T0000033.1 MGP_CBAJ_G0000026.1 mouse_genomes_project 12 124099893 124099941 - MGP_CBAJ_P0000033 Ighj3 IG_J_gene IG_J_gene MGP_CBAJ_T0012653.1 MGP_CBAJ_G0010765.1 mouse_genomes_project 12 66588784 66589776 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0034313.1 MGP_CBAJ_G0019403.1 mouse_genomes_project 12 35274262 35396354 + MGP_CBAJ_P0034313 Snx13 protein_coding protein_coding MGP_CBAJ_T0034314.1 MGP_CBAJ_G0019403.1 mouse_genomes_project 12 35274273 35378419 + MGP_CBAJ_P0034314 Snx13 protein_coding protein_coding MGP_CBAJ_T0097934.1 MGP_CBAJ_G0036207.1 mouse_genomes_project 12 115228362 115228491 + Gm22790 rRNA rRNA MGP_CBAJ_T0035294.1 MGP_CBAJ_G0019728.1 mouse_genomes_project 12 108331618 108387201 + Tdp1 protein_coding retained_intron MGP_CBAJ_T0035295.1 MGP_CBAJ_G0019728.1 mouse_genomes_project 12 108331635 108334789 + Tdp1 protein_coding processed_transcript MGP_CBAJ_T0035296.1 MGP_CBAJ_G0019728.1 mouse_genomes_project 12 108331638 108412579 + MGP_CBAJ_P0035296 Tdp1 protein_coding protein_coding MGP_CBAJ_T0035297.1 MGP_CBAJ_G0019728.1 mouse_genomes_project 12 108333585 108338255 + MGP_CBAJ_P0035297 Tdp1 protein_coding protein_coding MGP_CBAJ_T0035298.1 MGP_CBAJ_G0019728.1 mouse_genomes_project 12 108338089 108412574 + MGP_CBAJ_P0035298 Tdp1 protein_coding protein_coding MGP_CBAJ_T0035299.1 MGP_CBAJ_G0019728.1 mouse_genomes_project 12 108361551 108362483 + Tdp1 protein_coding retained_intron MGP_CBAJ_T0035300.1 MGP_CBAJ_G0019728.1 mouse_genomes_project 12 108363909 108412579 + Tdp1 protein_coding retained_intron MGP_CBAJ_T0000050.1 MGP_CBAJ_G0000039.1 mouse_genomes_project 12 125551340 125551634 + MGP_CBAJ_P0000050 Ighv1-13 IG_LV_gene IG_LV_gene MGP_CBAJ_T0012640.1 MGP_CBAJ_G0010752.1 mouse_genomes_project 12 51751487 51752482 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0035457.1 MGP_CBAJ_G0019785.1 mouse_genomes_project 12 113587961 113698739 + MGP_CBAJ_P0035457 Serpina3m protein_coding protein_coding MGP_CBAJ_T0035458.1 MGP_CBAJ_G0019785.1 mouse_genomes_project 12 113685197 113698740 + MGP_CBAJ_P0035458 Serpina3m protein_coding protein_coding MGP_CBAJ_T0035782.1 MGP_CBAJ_G0019897.1 mouse_genomes_project 12 129910587 129979984 - MGP_CBAJ_P0035782 Sp4 protein_coding protein_coding MGP_CBAJ_T0000223.1 MGP_CBAJ_G0000168.1 mouse_genomes_project 12 124702064 124702508 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0034646.1 MGP_CBAJ_G0019527.1 mouse_genomes_project 12 75762012 75852678 + MGP_CBAJ_P0034646 Arid4a protein_coding protein_coding MGP_CBAJ_T0034647.1 MGP_CBAJ_G0019527.1 mouse_genomes_project 12 75762051 75821943 + Arid4a protein_coding processed_transcript MGP_CBAJ_T0034648.1 MGP_CBAJ_G0019527.1 mouse_genomes_project 12 75762730 75796862 + MGP_CBAJ_P0034648 Arid4a protein_coding protein_coding MGP_CBAJ_T0034649.1 MGP_CBAJ_G0019527.1 mouse_genomes_project 12 75797863 75831513 + MGP_CBAJ_P0034649 Arid4a protein_coding protein_coding MGP_CBAJ_T0012664.1 MGP_CBAJ_G0010776.1 mouse_genomes_project 12 87720479 87720915 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009704.1 MGP_CBAJ_G0007842.1 mouse_genomes_project 12 118827480 118827557 - Gm23872 miRNA miRNA MGP_CBAJ_T0009771.1 MGP_CBAJ_G0007909.1 mouse_genomes_project 12 119932717 119932796 + Mir369 miRNA miRNA MGP_CBAJ_T0006395.1 MGP_CBAJ_G0005315.1 mouse_genomes_project 12 119919058 119938578 + Mirg lincRNA lincRNA MGP_CBAJ_T0006396.1 MGP_CBAJ_G0005315.1 mouse_genomes_project 12 119919059 119920136 + Mirg lincRNA lincRNA MGP_CBAJ_T0006397.1 MGP_CBAJ_G0005315.1 mouse_genomes_project 12 119919570 119938578 + Mirg lincRNA lincRNA MGP_CBAJ_T0006398.1 MGP_CBAJ_G0005315.1 mouse_genomes_project 12 119920253 119938580 + Mirg lincRNA lincRNA MGP_CBAJ_T0006399.1 MGP_CBAJ_G0005315.1 mouse_genomes_project 12 119924284 119933033 + Mirg lincRNA lincRNA MGP_CBAJ_T0006400.1 MGP_CBAJ_G0005315.1 mouse_genomes_project 12 119924284 119938578 + Mirg lincRNA lincRNA MGP_CBAJ_T0006401.1 MGP_CBAJ_G0005315.1 mouse_genomes_project 12 119924288 119937293 + Mirg lincRNA lincRNA MGP_CBAJ_T0006402.1 MGP_CBAJ_G0005315.1 mouse_genomes_project 12 119927001 119929361 + Mirg lincRNA lincRNA MGP_CBAJ_T0006403.1 MGP_CBAJ_G0005315.1 mouse_genomes_project 12 119927079 119930803 + Mirg lincRNA lincRNA MGP_CBAJ_T0006404.1 MGP_CBAJ_G0005315.1 mouse_genomes_project 12 119933100 119938578 + Mirg lincRNA lincRNA MGP_CBAJ_T0006405.1 MGP_CBAJ_G0005315.1 mouse_genomes_project 12 119937012 119938575 + Mirg lincRNA lincRNA MGP_CBAJ_T0006406.1 MGP_CBAJ_G0005315.1 mouse_genomes_project 12 119937073 119938578 + Mirg lincRNA lincRNA MGP_CBAJ_T0000819.1 MGP_CBAJ_G0000755.1 mouse_genomes_project 12 9318354 9319104 - TEC TEC MGP_CBAJ_T0034996.1 MGP_CBAJ_G0019645.1 mouse_genomes_project 12 90797390 90834162 + MGP_CBAJ_P0034996 Ptgr2 protein_coding protein_coding MGP_CBAJ_T0034997.1 MGP_CBAJ_G0019645.1 mouse_genomes_project 12 90797523 90818672 + Ptgr2 protein_coding retained_intron MGP_CBAJ_T0034998.1 MGP_CBAJ_G0019645.1 mouse_genomes_project 12 90797532 90824602 + MGP_CBAJ_P0034998 Ptgr2 protein_coding protein_coding MGP_CBAJ_T0034999.1 MGP_CBAJ_G0019645.1 mouse_genomes_project 12 90797539 90813015 + Ptgr2 protein_coding retained_intron MGP_CBAJ_T0035000.1 MGP_CBAJ_G0019645.1 mouse_genomes_project 12 90797542 90823081 + Ptgr2 protein_coding processed_transcript MGP_CBAJ_T0035001.1 MGP_CBAJ_G0019645.1 mouse_genomes_project 12 90797557 90820728 + Ptgr2 protein_coding processed_transcript MGP_CBAJ_T0035002.1 MGP_CBAJ_G0019645.1 mouse_genomes_project 12 90797558 90832432 + MGP_CBAJ_P0035002 Ptgr2 protein_coding protein_coding MGP_CBAJ_T0035003.1 MGP_CBAJ_G0019645.1 mouse_genomes_project 12 90797564 90833184 + MGP_CBAJ_P0035003 Ptgr2 protein_coding protein_coding MGP_CBAJ_T0035004.1 MGP_CBAJ_G0019645.1 mouse_genomes_project 12 90797571 90832432 + MGP_CBAJ_P0035004 Ptgr2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0009756.1 MGP_CBAJ_G0007894.1 mouse_genomes_project 12 119917418 119917492 + Mir539 miRNA miRNA MGP_CBAJ_T0035086.1 MGP_CBAJ_G0019671.1 mouse_genomes_project 12 91902772 91910807 - MGP_CBAJ_P0035086 Acyp1 protein_coding protein_coding MGP_CBAJ_T0035087.1 MGP_CBAJ_G0019671.1 mouse_genomes_project 12 91902783 91910678 - MGP_CBAJ_P0035087 Acyp1 protein_coding protein_coding MGP_CBAJ_T0035088.1 MGP_CBAJ_G0019671.1 mouse_genomes_project 12 91902921 91920640 - MGP_CBAJ_P0035088 Acyp1 protein_coding protein_coding MGP_CBAJ_T0035089.1 MGP_CBAJ_G0019671.1 mouse_genomes_project 12 91909264 91910790 - MGP_CBAJ_P0035089 Acyp1 protein_coding protein_coding MGP_CBAJ_T0009785.1 MGP_CBAJ_G0007923.1 mouse_genomes_project 12 127639318 127639433 - Gm44372 miRNA miRNA MGP_CBAJ_T0100035.1 MGP_CBAJ_G0038290.1 mouse_genomes_project 12 119874600 119874673 + Gm23787 snoRNA snoRNA MGP_CBAJ_T0035775.1 MGP_CBAJ_G0019895.1 mouse_genomes_project 12 129468076 129504672 + MGP_CBAJ_P0035775 Cdca7l protein_coding protein_coding MGP_CBAJ_T0035776.1 MGP_CBAJ_G0019895.1 mouse_genomes_project 12 129468445 129499725 + MGP_CBAJ_P0035776 Cdca7l protein_coding protein_coding MGP_CBAJ_T0035777.1 MGP_CBAJ_G0019895.1 mouse_genomes_project 12 129468449 129501597 + MGP_CBAJ_P0035777 Cdca7l protein_coding protein_coding MGP_CBAJ_T0035754.1 MGP_CBAJ_G0019887.1 mouse_genomes_project 12 124230743 124233705 + MGP_CBAJ_P0035754 protein_coding protein_coding MGP_CBAJ_T0034017.1 MGP_CBAJ_G0019296.1 mouse_genomes_project 12 2133505 2146662 - Mfsd2b protein_coding retained_intron MGP_CBAJ_T0034018.1 MGP_CBAJ_G0019296.1 mouse_genomes_project 12 2133505 2146665 - MGP_CBAJ_P0034018 Mfsd2b protein_coding nonsense_mediated_decay MGP_CBAJ_T0034019.1 MGP_CBAJ_G0019296.1 mouse_genomes_project 12 2134194 2146652 - Mfsd2b protein_coding retained_intron MGP_CBAJ_T0034020.1 MGP_CBAJ_G0019296.1 mouse_genomes_project 12 2134194 2146665 - MGP_CBAJ_P0034020 Mfsd2b protein_coding protein_coding MGP_CBAJ_T0034021.1 MGP_CBAJ_G0019296.1 mouse_genomes_project 12 2134194 2146665 - MGP_CBAJ_P0034021 Mfsd2b protein_coding protein_coding MGP_CBAJ_T0034022.1 MGP_CBAJ_G0019296.1 mouse_genomes_project 12 2134658 2146666 - Mfsd2b protein_coding retained_intron MGP_CBAJ_T0034023.1 MGP_CBAJ_G0019296.1 mouse_genomes_project 12 2138855 2141566 - Mfsd2b protein_coding retained_intron MGP_CBAJ_T0034024.1 MGP_CBAJ_G0019296.1 mouse_genomes_project 12 2141252 2146666 - MGP_CBAJ_P0034024 Mfsd2b protein_coding nonsense_mediated_decay MGP_CBAJ_T0035469.1 MGP_CBAJ_G0019794.1 mouse_genomes_project 12 114606908 114613793 + MGP_CBAJ_P0035469 protein_coding protein_coding MGP_CBAJ_T0034419.1 MGP_CBAJ_G0019443.1 mouse_genomes_project 12 54059661 54168420 - MGP_CBAJ_P0034419 Heatr5a protein_coding protein_coding MGP_CBAJ_T0034420.1 MGP_CBAJ_G0019443.1 mouse_genomes_project 12 54063228 54168353 - MGP_CBAJ_P0034420 Heatr5a protein_coding unknown_likely_coding MGP_CBAJ_T0034541.1 MGP_CBAJ_G0019489.1 mouse_genomes_project 12 68880661 68903755 - MGP_CBAJ_P0034541 Klhl28 protein_coding protein_coding MGP_CBAJ_T0012646.1 MGP_CBAJ_G0010758.1 mouse_genomes_project 12 60164812 60165278 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098754.1 MGP_CBAJ_G0037009.1 mouse_genomes_project 12 56643423 56643569 - Gm24692 snRNA snRNA MGP_CBAJ_T0034726.1 MGP_CBAJ_G0019555.1 mouse_genomes_project 12 79168184 79480963 + MGP_CBAJ_P0034726 Syt16 protein_coding protein_coding MGP_CBAJ_T0034727.1 MGP_CBAJ_G0019555.1 mouse_genomes_project 12 79354375 79480959 + MGP_CBAJ_P0034727 Syt16 protein_coding unknown_likely_coding MGP_CBAJ_T0009775.1 MGP_CBAJ_G0007913.1 mouse_genomes_project 12 120986927 120987030 + Gm27299 miRNA miRNA MGP_CBAJ_T0034956.1 MGP_CBAJ_G0019630.1 mouse_genomes_project 12 90091201 90140514 + MGP_CBAJ_P0034956 Psen1 protein_coding protein_coding MGP_CBAJ_T0034957.1 MGP_CBAJ_G0019630.1 mouse_genomes_project 12 90091561 90141600 + MGP_CBAJ_P0034957 Psen1 protein_coding protein_coding MGP_CBAJ_T0006359.1 MGP_CBAJ_G0005293.1 mouse_genomes_project 12 109671653 109677897 + D130020L05Rik lincRNA lincRNA MGP_CBAJ_T0000829.1 MGP_CBAJ_G0000765.1 mouse_genomes_project 12 89424419 89425361 + TEC TEC MGP_CBAJ_T0000833.1 MGP_CBAJ_G0000769.1 mouse_genomes_project 12 111461705 111463849 - TEC TEC MGP_CBAJ_T0034390.1 MGP_CBAJ_G0019430.1 mouse_genomes_project 12 45630492 45923661 + MGP_CBAJ_P0034390 Nrcam protein_coding protein_coding MGP_CBAJ_T0034391.1 MGP_CBAJ_G0019430.1 mouse_genomes_project 12 45630492 45923661 + MGP_CBAJ_P0034391 Nrcam protein_coding protein_coding MGP_CBAJ_T0034392.1 MGP_CBAJ_G0019430.1 mouse_genomes_project 12 45845457 45920366 + MGP_CBAJ_P0034392 Nrcam protein_coding unknown_likely_coding MGP_CBAJ_T0017048.1 MGP_CBAJ_G0014973.1 mouse_genomes_project 12 87660893 87685862 + 6530401F13Rik processed_transcript processed_transcript MGP_CBAJ_T0100009.1 MGP_CBAJ_G0038264.1 mouse_genomes_project 12 94351381 94351517 - Mir3068 snoRNA snoRNA MGP_CBAJ_T0034098.1 MGP_CBAJ_G0019329.1 mouse_genomes_project 12 15305065 15311766 + MGP_CBAJ_P0034098 Ntsr2 protein_coding protein_coding MGP_CBAJ_T0011197.1 MGP_CBAJ_G0009335.1 mouse_genomes_project 12 32310905 32311223 - Gm23875 misc_RNA misc_RNA MGP_CBAJ_T0012698.1 MGP_CBAJ_G0010810.1 mouse_genomes_project 12 129454923 129455268 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0003314.1 MGP_CBAJ_G0003047.1 mouse_genomes_project 12 31319456 31320388 + Gm29542 antisense antisense MGP_CBAJ_T0006376.1 MGP_CBAJ_G0005306.1 mouse_genomes_project 12 117045888 117049068 + Gm2800 lincRNA lincRNA MGP_CBAJ_T0099997.1 MGP_CBAJ_G0038252.1 mouse_genomes_project 12 68634784 68634915 + Gm24066 snoRNA snoRNA MGP_CBAJ_T0035378.1 MGP_CBAJ_G0019756.1 mouse_genomes_project 12 111659025 111678743 + MGP_CBAJ_P0035378 Ubr7 protein_coding protein_coding MGP_CBAJ_T0035554.1 MGP_CBAJ_G0019822.1 mouse_genomes_project 12 119204200 119225857 - MGP_CBAJ_P0035554 Begain protein_coding unknown_likely_coding MGP_CBAJ_T0035555.1 MGP_CBAJ_G0019822.1 mouse_genomes_project 12 119204210 119244731 - MGP_CBAJ_P0035555 Begain protein_coding protein_coding MGP_CBAJ_T0035556.1 MGP_CBAJ_G0019822.1 mouse_genomes_project 12 119206639 119209116 - Begain protein_coding retained_intron MGP_CBAJ_T0035557.1 MGP_CBAJ_G0019822.1 mouse_genomes_project 12 119209716 119225716 - Begain protein_coding processed_transcript MGP_CBAJ_T0034063.1 MGP_CBAJ_G0019309.1 mouse_genomes_project 12 6767206 6794847 + MGP_CBAJ_P0034063 Matn3 protein_coding protein_coding MGP_CBAJ_T0100017.1 MGP_CBAJ_G0038272.1 mouse_genomes_project 12 119821047 119821122 + Gm23474 snoRNA snoRNA MGP_CBAJ_T0009776.1 MGP_CBAJ_G0007914.1 mouse_genomes_project 12 122604612 122604697 + Mir3073a miRNA miRNA MGP_CBAJ_T0034610.1 MGP_CBAJ_G0019516.1 mouse_genomes_project 12 74491514 74588150 + MGP_CBAJ_P0034610 Atl1 protein_coding protein_coding MGP_CBAJ_T0034200.1 MGP_CBAJ_G0019364.1 mouse_genomes_project 12 28330847 28337687 + MGP_CBAJ_P0034200 Adi1 protein_coding protein_coding MGP_CBAJ_T0034201.1 MGP_CBAJ_G0019364.1 mouse_genomes_project 12 28331100 28337241 + MGP_CBAJ_P0034201 Adi1 protein_coding protein_coding MGP_CBAJ_T0034202.1 MGP_CBAJ_G0019364.1 mouse_genomes_project 12 28333134 28335039 + Adi1 protein_coding processed_transcript MGP_CBAJ_T0034937.1 MGP_CBAJ_G0019628.1 mouse_genomes_project 12 89931543 89983552 - MGP_CBAJ_P0034937 Zfyve1 protein_coding protein_coding MGP_CBAJ_T0035553.1 MGP_CBAJ_G0019821.1 mouse_genomes_project 12 119034797 119200499 + MGP_CBAJ_P0035553 Wdr25 protein_coding unknown_likely_coding MGP_CBAJ_T0012678.1 MGP_CBAJ_G0010790.1 mouse_genomes_project 12 110638364 110638711 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000076.1 MGP_CBAJ_G0000059.1 mouse_genomes_project 12 125017290 125017586 - MGP_CBAJ_P0000076 Ighv3-3 IG_V_gene IG_V_gene MGP_CBAJ_T0000077.1 MGP_CBAJ_G0000059.1 mouse_genomes_project 12 125017290 125017729 - MGP_CBAJ_P0000077 Ighv3-3 IG_V_gene IG_V_gene MGP_CBAJ_T0034573.1 MGP_CBAJ_G0019502.1 mouse_genomes_project 12 73677407 73687852 - MGP_CBAJ_P0034573 Dnaaf2 protein_coding protein_coding MGP_CBAJ_T0035090.1 MGP_CBAJ_G0019672.1 mouse_genomes_project 12 91920807 91931575 + MGP_CBAJ_P0035090 Zc2hc1c protein_coding protein_coding MGP_CBAJ_T0034404.1 MGP_CBAJ_G0019435.1 mouse_genomes_project 12 51278071 51278632 + MGP_CBAJ_P0034404 Gm9804 protein_coding protein_coding MGP_CBAJ_T0000256.1 MGP_CBAJ_G0000201.1 mouse_genomes_project 12 127495569 127496002 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0034311.1 MGP_CBAJ_G0019401.1 mouse_genomes_project 12 35054782 35055838 - MGP_CBAJ_P0034311 4921508M14Rik protein_coding protein_coding MGP_CBAJ_T0012681.1 MGP_CBAJ_G0010793.1 mouse_genomes_project 12 113399081 113400168 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0034585.1 MGP_CBAJ_G0019508.1 mouse_genomes_project 12 73899966 73900590 - MGP_CBAJ_P0034585 Gm9887 protein_coding protein_coding MGP_CBAJ_T0009746.1 MGP_CBAJ_G0007884.1 mouse_genomes_project 12 119909285 119909377 + Mir667 miRNA miRNA MGP_CBAJ_T0009713.1 MGP_CBAJ_G0007851.1 mouse_genomes_project 12 119773411 119773472 - Mir3544 miRNA miRNA MGP_CBAJ_T0009734.1 MGP_CBAJ_G0007872.1 mouse_genomes_project 12 119901054 119901166 - Gm25750 miRNA miRNA MGP_CBAJ_T0098780.1 MGP_CBAJ_G0037035.1 mouse_genomes_project 12 106859534 106859597 + Gm25486 snRNA snRNA MGP_CBAJ_T0009750.1 MGP_CBAJ_G0007888.1 mouse_genomes_project 12 119913045 119913165 - Gm25252 miRNA miRNA MGP_CBAJ_T0034282.1 MGP_CBAJ_G0019392.1 mouse_genomes_project 12 32951049 32978476 + MGP_CBAJ_P0034282 Sypl protein_coding protein_coding MGP_CBAJ_T0034283.1 MGP_CBAJ_G0019392.1 mouse_genomes_project 12 32951342 32976347 + MGP_CBAJ_P0034283 Sypl protein_coding protein_coding MGP_CBAJ_T0034284.1 MGP_CBAJ_G0019392.1 mouse_genomes_project 12 32951405 32973594 + MGP_CBAJ_P0034284 Sypl protein_coding nonsense_mediated_decay MGP_CBAJ_T0034285.1 MGP_CBAJ_G0019392.1 mouse_genomes_project 12 32951717 32967143 + Sypl protein_coding processed_transcript MGP_CBAJ_T0034286.1 MGP_CBAJ_G0019392.1 mouse_genomes_project 12 32962495 32969858 + Sypl protein_coding retained_intron MGP_CBAJ_T0034287.1 MGP_CBAJ_G0019392.1 mouse_genomes_project 12 32962575 32968957 + Sypl protein_coding processed_transcript MGP_CBAJ_T0034177.1 MGP_CBAJ_G0019351.1 mouse_genomes_project 12 23814060 23819969 + MGP_CBAJ_P0034177 Rrm2 protein_coding protein_coding MGP_CBAJ_T0034178.1 MGP_CBAJ_G0019351.1 mouse_genomes_project 12 23814375 23815409 + Rrm2 protein_coding retained_intron MGP_CBAJ_T0034179.1 MGP_CBAJ_G0019351.1 mouse_genomes_project 12 23814848 23819162 + MGP_CBAJ_P0034179 Rrm2 protein_coding protein_coding MGP_CBAJ_T0000254.1 MGP_CBAJ_G0000199.1 mouse_genomes_project 12 127409564 127409997 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0034141.1 MGP_CBAJ_G0019341.1 mouse_genomes_project 12 20140281 20252814 + MGP_CBAJ_P0034141 Asap2 protein_coding protein_coding MGP_CBAJ_T0034142.1 MGP_CBAJ_G0019341.1 mouse_genomes_project 12 20140281 20252814 + MGP_CBAJ_P0034142 Asap2 protein_coding protein_coding MGP_CBAJ_T0034143.1 MGP_CBAJ_G0019341.1 mouse_genomes_project 12 20140281 20252814 + MGP_CBAJ_P0034143 Asap2 protein_coding protein_coding MGP_CBAJ_T0034144.1 MGP_CBAJ_G0019341.1 mouse_genomes_project 12 20140281 20250854 + MGP_CBAJ_P0034144 Asap2 protein_coding protein_coding MGP_CBAJ_T0035623.1 MGP_CBAJ_G0019843.1 mouse_genomes_project 12 121828282 121840810 + MGP_CBAJ_P0035623 Tnfaip2 protein_coding protein_coding MGP_CBAJ_T0035624.1 MGP_CBAJ_G0019843.1 mouse_genomes_project 12 121828471 121840470 + MGP_CBAJ_P0035624 Tnfaip2 protein_coding protein_coding MGP_CBAJ_T0035625.1 MGP_CBAJ_G0019843.1 mouse_genomes_project 12 121828475 121840470 + Tnfaip2 protein_coding retained_intron MGP_CBAJ_T0035626.1 MGP_CBAJ_G0019843.1 mouse_genomes_project 12 121828475 121834398 + MGP_CBAJ_P0035626 Tnfaip2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035627.1 MGP_CBAJ_G0019843.1 mouse_genomes_project 12 121830137 121831325 + MGP_CBAJ_P0035627 Tnfaip2 protein_coding protein_coding MGP_CBAJ_T0035628.1 MGP_CBAJ_G0019843.1 mouse_genomes_project 12 121830811 121839617 + MGP_CBAJ_P0035628 Tnfaip2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035629.1 MGP_CBAJ_G0019843.1 mouse_genomes_project 12 121831897 121839617 + MGP_CBAJ_P0035629 Tnfaip2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035630.1 MGP_CBAJ_G0019843.1 mouse_genomes_project 12 121833945 121835122 + Tnfaip2 protein_coding retained_intron MGP_CBAJ_T0035631.1 MGP_CBAJ_G0019843.1 mouse_genomes_project 12 121835321 121837273 + Tnfaip2 protein_coding retained_intron MGP_CBAJ_T0035632.1 MGP_CBAJ_G0019843.1 mouse_genomes_project 12 121835676 121839551 + MGP_CBAJ_P0035632 Tnfaip2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035633.1 MGP_CBAJ_G0019843.1 mouse_genomes_project 12 121836322 121839418 + Tnfaip2 protein_coding retained_intron MGP_CBAJ_T0035603.1 MGP_CBAJ_G0019834.1 mouse_genomes_project 12 121242949 121333925 + MGP_CBAJ_P0035603 Tecpr2 protein_coding protein_coding MGP_CBAJ_T0035604.1 MGP_CBAJ_G0019834.1 mouse_genomes_project 12 121242949 121333927 + MGP_CBAJ_P0035604 Tecpr2 protein_coding protein_coding MGP_CBAJ_T0034406.1 MGP_CBAJ_G0019437.1 mouse_genomes_project 12 53472473 53501413 + MGP_CBAJ_P0034406 G2e3 protein_coding protein_coding MGP_CBAJ_T0034407.1 MGP_CBAJ_G0019437.1 mouse_genomes_project 12 53472700 53497694 + MGP_CBAJ_P0034407 G2e3 protein_coding protein_coding MGP_CBAJ_T0034408.1 MGP_CBAJ_G0019437.1 mouse_genomes_project 12 53472784 53497797 + MGP_CBAJ_P0034408 G2e3 protein_coding protein_coding MGP_CBAJ_T0034409.1 MGP_CBAJ_G0019437.1 mouse_genomes_project 12 53481540 53487926 + G2e3 protein_coding retained_intron MGP_CBAJ_T0034410.1 MGP_CBAJ_G0019437.1 mouse_genomes_project 12 53495101 53498504 + G2e3 protein_coding retained_intron MGP_CBAJ_T0009729.1 MGP_CBAJ_G0007867.1 mouse_genomes_project 12 119871844 119871921 + Mir882 miRNA miRNA MGP_CBAJ_T0000105.1 MGP_CBAJ_G0000080.1 mouse_genomes_project 12 125495825 125496258 - MGP_CBAJ_P0000105 Ighv1-49 IG_V_gene IG_V_gene MGP_CBAJ_T0000106.1 MGP_CBAJ_G0000080.1 mouse_genomes_project 12 125495825 125496258 - MGP_CBAJ_P0000106 Ighv1-49 IG_V_gene IG_V_gene MGP_CBAJ_T0034686.1 MGP_CBAJ_G0019539.1 mouse_genomes_project 12 77443964 77492233 + MGP_CBAJ_P0034686 Pcnx4 protein_coding protein_coding MGP_CBAJ_T0009691.1 MGP_CBAJ_G0007829.1 mouse_genomes_project 12 94180278 94180354 + miRNA miRNA MGP_CBAJ_T0006366.1 MGP_CBAJ_G0005299.1 mouse_genomes_project 12 116344651 116363256 + Gm17033 lincRNA lincRNA MGP_CBAJ_T0006351.1 MGP_CBAJ_G0005285.1 mouse_genomes_project 12 94351383 94351516 - Gm29362 lincRNA lincRNA MGP_CBAJ_T0000820.1 MGP_CBAJ_G0000756.1 mouse_genomes_project 12 10860949 10861482 + TEC TEC MGP_CBAJ_T0000251.1 MGP_CBAJ_G0000196.1 mouse_genomes_project 12 126755585 126756018 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0034288.1 MGP_CBAJ_G0019393.1 mouse_genomes_project 12 33039971 33113338 - MGP_CBAJ_P0034288 Cdhr3 protein_coding protein_coding MGP_CBAJ_T0097918.1 MGP_CBAJ_G0036191.1 mouse_genomes_project 12 10312071 10312202 + Gm26171 rRNA rRNA MGP_CBAJ_T0034991.1 MGP_CBAJ_G0019643.1 mouse_genomes_project 12 90639509 90641868 - MGP_CBAJ_P0034991 Pnma1 protein_coding protein_coding MGP_CBAJ_T0003300.1 MGP_CBAJ_G0003042.1 mouse_genomes_project 12 227271 233181 + Rab10os antisense antisense MGP_CBAJ_T0003301.1 MGP_CBAJ_G0003042.1 mouse_genomes_project 12 227293 242148 + Rab10os antisense antisense MGP_CBAJ_T0003302.1 MGP_CBAJ_G0003042.1 mouse_genomes_project 12 227293 230044 + Rab10os antisense antisense MGP_CBAJ_T0003303.1 MGP_CBAJ_G0003042.1 mouse_genomes_project 12 227557 242147 + Rab10os antisense antisense MGP_CBAJ_T0003304.1 MGP_CBAJ_G0003042.1 mouse_genomes_project 12 227598 231005 + Rab10os antisense antisense MGP_CBAJ_T0003305.1 MGP_CBAJ_G0003042.1 mouse_genomes_project 12 227681 241715 + Rab10os antisense antisense MGP_CBAJ_T0003306.1 MGP_CBAJ_G0003042.1 mouse_genomes_project 12 228381 241770 + Rab10os antisense antisense MGP_CBAJ_T0017049.1 MGP_CBAJ_G0014974.1 mouse_genomes_project 12 99122552 99133800 - Gm8378 processed_transcript processed_transcript MGP_CBAJ_T0017050.1 MGP_CBAJ_G0014974.1 mouse_genomes_project 12 99130309 99133845 - Gm8378 processed_transcript processed_transcript MGP_CBAJ_T0017051.1 MGP_CBAJ_G0014974.1 mouse_genomes_project 12 99132197 99133845 - Gm8378 processed_transcript processed_transcript MGP_CBAJ_T0034386.1 MGP_CBAJ_G0019429.1 mouse_genomes_project 12 45577109 45584692 + MGP_CBAJ_P0034386 Pnpla8 protein_coding protein_coding MGP_CBAJ_T0034387.1 MGP_CBAJ_G0019429.1 mouse_genomes_project 12 45584374 45614103 + MGP_CBAJ_P0034387 Pnpla8 protein_coding protein_coding MGP_CBAJ_T0034388.1 MGP_CBAJ_G0019429.1 mouse_genomes_project 12 45584468 45618816 + MGP_CBAJ_P0034388 Pnpla8 protein_coding protein_coding MGP_CBAJ_T0034389.1 MGP_CBAJ_G0019429.1 mouse_genomes_project 12 45598024 45613604 + MGP_CBAJ_P0034389 Pnpla8 protein_coding protein_coding MGP_CBAJ_T0009673.1 MGP_CBAJ_G0007811.1 mouse_genomes_project 12 45511544 45511605 + Mir5627 miRNA miRNA MGP_CBAJ_T0034815.1 MGP_CBAJ_G0019590.1 mouse_genomes_project 12 84757864 84759231 - MGP_CBAJ_P0034815 protein_coding protein_coding MGP_CBAJ_T0009732.1 MGP_CBAJ_G0007870.1 mouse_genomes_project 12 119899913 119899976 + Mir299a miRNA miRNA MGP_CBAJ_T0035338.1 MGP_CBAJ_G0019741.1 mouse_genomes_project 12 110506643 110589362 - MGP_CBAJ_P0035338 Fbln5 protein_coding protein_coding MGP_CBAJ_T0035716.1 MGP_CBAJ_G0019875.1 mouse_genomes_project 12 123523156 123530554 - MGP_CBAJ_P0035716 Nudt14 protein_coding protein_coding MGP_CBAJ_T0035690.1 MGP_CBAJ_G0019864.1 mouse_genomes_project 12 123178941 123204792 + MGP_CBAJ_P0035690 Adssl1 protein_coding protein_coding MGP_CBAJ_T0035691.1 MGP_CBAJ_G0019864.1 mouse_genomes_project 12 123178943 123204807 + MGP_CBAJ_P0035691 Adssl1 protein_coding protein_coding MGP_CBAJ_T0034779.1 MGP_CBAJ_G0019575.1 mouse_genomes_project 12 82113457 82253724 - MGP_CBAJ_P0034779 Sptb protein_coding protein_coding MGP_CBAJ_T0034780.1 MGP_CBAJ_G0019575.1 mouse_genomes_project 12 82116200 82117056 - Sptb protein_coding retained_intron MGP_CBAJ_T0034781.1 MGP_CBAJ_G0019575.1 mouse_genomes_project 12 82129079 82253200 - MGP_CBAJ_P0034781 Sptb protein_coding protein_coding MGP_CBAJ_T0012683.1 MGP_CBAJ_G0010795.1 mouse_genomes_project 12 116278336 116280005 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0035714.1 MGP_CBAJ_G0019873.1 mouse_genomes_project 12 123429611 123441301 - MGP_CBAJ_P0035714 Gpr132 protein_coding protein_coding MGP_CBAJ_T0000230.1 MGP_CBAJ_G0000175.1 mouse_genomes_project 12 124962702 124962978 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0098758.1 MGP_CBAJ_G0037013.1 mouse_genomes_project 12 57532816 57532921 + Gm24296 snRNA snRNA MGP_CBAJ_T0035753.1 MGP_CBAJ_G0019886.1 mouse_genomes_project 12 124230696 124233705 + MGP_CBAJ_P0035753 protein_coding protein_coding MGP_CBAJ_T0034209.1 MGP_CBAJ_G0019368.1 mouse_genomes_project 12 29674169 29751079 + MGP_CBAJ_P0034209 Pxdn protein_coding protein_coding MGP_CBAJ_T0034210.1 MGP_CBAJ_G0019368.1 mouse_genomes_project 12 29674183 29723352 + Pxdn protein_coding retained_intron MGP_CBAJ_T0034211.1 MGP_CBAJ_G0019368.1 mouse_genomes_project 12 29674183 29722800 + MGP_CBAJ_P0034211 Pxdn protein_coding protein_coding MGP_CBAJ_T0034212.1 MGP_CBAJ_G0019368.1 mouse_genomes_project 12 29730247 29736155 + Pxdn protein_coding processed_transcript MGP_CBAJ_T0034213.1 MGP_CBAJ_G0019368.1 mouse_genomes_project 12 29730253 29733594 + Pxdn protein_coding retained_intron MGP_CBAJ_T0034214.1 MGP_CBAJ_G0019368.1 mouse_genomes_project 12 29733622 29736297 + Pxdn protein_coding retained_intron MGP_CBAJ_T0000238.1 MGP_CBAJ_G0000183.1 mouse_genomes_project 12 125377664 125377962 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0034229.1 MGP_CBAJ_G0019374.1 mouse_genomes_project 12 30701803 30760081 + Sh3yl1 protein_coding retained_intron MGP_CBAJ_T0034230.1 MGP_CBAJ_G0019374.1 mouse_genomes_project 12 30701803 30760225 + MGP_CBAJ_P0034230 Sh3yl1 protein_coding protein_coding MGP_CBAJ_T0034231.1 MGP_CBAJ_G0019374.1 mouse_genomes_project 12 30701827 30760214 + MGP_CBAJ_P0034231 Sh3yl1 protein_coding protein_coding MGP_CBAJ_T0034232.1 MGP_CBAJ_G0019374.1 mouse_genomes_project 12 30702322 30760219 + Sh3yl1 protein_coding processed_transcript MGP_CBAJ_T0034852.1 MGP_CBAJ_G0019607.1 mouse_genomes_project 12 86776299 86782795 - MGP_CBAJ_P0034852 Ccdc177 protein_coding protein_coding MGP_CBAJ_T0035694.1 MGP_CBAJ_G0019866.1 mouse_genomes_project 12 123217353 123237505 - MGP_CBAJ_P0035694 Akt1 protein_coding protein_coding MGP_CBAJ_T0035695.1 MGP_CBAJ_G0019866.1 mouse_genomes_project 12 123218199 123235020 - MGP_CBAJ_P0035695 Akt1 protein_coding protein_coding MGP_CBAJ_T0035696.1 MGP_CBAJ_G0019866.1 mouse_genomes_project 12 123219383 123220453 - Akt1 protein_coding retained_intron MGP_CBAJ_T0035697.1 MGP_CBAJ_G0019866.1 mouse_genomes_project 12 123220573 123223122 - Akt1 protein_coding retained_intron MGP_CBAJ_T0035698.1 MGP_CBAJ_G0019866.1 mouse_genomes_project 12 123221041 123222627 - Akt1 protein_coding retained_intron MGP_CBAJ_T0035699.1 MGP_CBAJ_G0019866.1 mouse_genomes_project 12 123221909 123238113 - MGP_CBAJ_P0035699 Akt1 protein_coding protein_coding MGP_CBAJ_T0035700.1 MGP_CBAJ_G0019866.1 mouse_genomes_project 12 123222644 123237387 - MGP_CBAJ_P0035700 Akt1 protein_coding protein_coding MGP_CBAJ_T0035701.1 MGP_CBAJ_G0019866.1 mouse_genomes_project 12 123222750 123231589 - Akt1 protein_coding processed_transcript MGP_CBAJ_T0009714.1 MGP_CBAJ_G0007852.1 mouse_genomes_project 12 119773678 119773745 + Mir540 miRNA miRNA MGP_CBAJ_T0035204.1 MGP_CBAJ_G0019706.1 mouse_genomes_project 12 94555781 94570699 + MGP_CBAJ_P0035204 protein_coding protein_coding MGP_CBAJ_T0000068.1 MGP_CBAJ_G0000053.1 mouse_genomes_project 12 124821971 124822543 - MGP_CBAJ_P0000068 IG_V_gene IG_V_gene MGP_CBAJ_T0035278.1 MGP_CBAJ_G0019725.1 mouse_genomes_project 12 107232696 107300304 + MGP_CBAJ_P0035278 Ttc8 protein_coding protein_coding MGP_CBAJ_T0035279.1 MGP_CBAJ_G0019725.1 mouse_genomes_project 12 107232734 107300302 + MGP_CBAJ_P0035279 Ttc8 protein_coding protein_coding MGP_CBAJ_T0035280.1 MGP_CBAJ_G0019725.1 mouse_genomes_project 12 107232942 107276564 + MGP_CBAJ_P0035280 Ttc8 protein_coding protein_coding MGP_CBAJ_T0035281.1 MGP_CBAJ_G0019725.1 mouse_genomes_project 12 107253670 107287818 + Ttc8 protein_coding processed_transcript MGP_CBAJ_T0035282.1 MGP_CBAJ_G0019725.1 mouse_genomes_project 12 107291323 107299598 + Ttc8 protein_coding processed_transcript MGP_CBAJ_T0035283.1 MGP_CBAJ_G0019725.1 mouse_genomes_project 12 107291352 107296915 + Ttc8 protein_coding processed_transcript MGP_CBAJ_T0034234.1 MGP_CBAJ_G0019376.1 mouse_genomes_project 12 30987650 30988205 + MGP_CBAJ_P0034234 6030469F06Rik protein_coding protein_coding MGP_CBAJ_T0035688.1 MGP_CBAJ_G0019862.1 mouse_genomes_project 12 123048626 123059669 - MGP_CBAJ_P0035688 Tmem179 protein_coding protein_coding MGP_CBAJ_T0098766.1 MGP_CBAJ_G0037021.1 mouse_genomes_project 12 73631677 73631781 - Gm24499 snRNA snRNA MGP_CBAJ_T0003348.1 MGP_CBAJ_G0003076.1 mouse_genomes_project 12 112275481 112277120 - Gm29508 antisense antisense MGP_CBAJ_T0003349.1 MGP_CBAJ_G0003076.1 mouse_genomes_project 12 112275482 112277884 - Gm29508 antisense antisense MGP_CBAJ_T0098187.1 MGP_CBAJ_G0036460.1 mouse_genomes_project 12 86366394 86366533 - Scarna3b scaRNA scaRNA MGP_CBAJ_T0097764.1 MGP_CBAJ_G0036037.1 mouse_genomes_project 12 90960436 90961820 + pseudogene pseudogene MGP_CBAJ_T0034309.1 MGP_CBAJ_G0019400.1 mouse_genomes_project 12 34524483 34693847 - MGP_CBAJ_P0034309 Hdac9 protein_coding unknown_likely_coding MGP_CBAJ_T0034310.1 MGP_CBAJ_G0019400.1 mouse_genomes_project 12 34524496 34693956 - MGP_CBAJ_P0034310 Hdac9 protein_coding protein_coding MGP_CBAJ_T0035168.1 MGP_CBAJ_G0019696.1 mouse_genomes_project 12 94112325 94121301 + Samd15 protein_coding retained_intron MGP_CBAJ_T0035169.1 MGP_CBAJ_G0019696.1 mouse_genomes_project 12 94112369 94120979 + Samd15 protein_coding processed_transcript MGP_CBAJ_T0035170.1 MGP_CBAJ_G0019696.1 mouse_genomes_project 12 94113086 94127145 + MGP_CBAJ_P0035170 Samd15 protein_coding protein_coding MGP_CBAJ_T0035171.1 MGP_CBAJ_G0019696.1 mouse_genomes_project 12 94113293 94114487 + MGP_CBAJ_P0035171 Samd15 protein_coding protein_coding MGP_CBAJ_T0003318.1 MGP_CBAJ_G0003051.1 mouse_genomes_project 12 41138706 41140293 - Gm17024 antisense antisense MGP_CBAJ_T0034613.1 MGP_CBAJ_G0019519.1 mouse_genomes_project 12 74636015 74742126 - MGP_CBAJ_P0034613 Nin protein_coding protein_coding MGP_CBAJ_T0034614.1 MGP_CBAJ_G0019519.1 mouse_genomes_project 12 74643310 74742147 - MGP_CBAJ_P0034614 Nin protein_coding protein_coding MGP_CBAJ_T0034615.1 MGP_CBAJ_G0019519.1 mouse_genomes_project 12 74643311 74751205 - MGP_CBAJ_P0034615 Nin protein_coding protein_coding MGP_CBAJ_T0034616.1 MGP_CBAJ_G0019519.1 mouse_genomes_project 12 74643331 74751200 - MGP_CBAJ_P0034616 Nin protein_coding protein_coding MGP_CBAJ_T0034617.1 MGP_CBAJ_G0019519.1 mouse_genomes_project 12 74649981 74750798 - MGP_CBAJ_P0034617 Nin protein_coding unknown_likely_coding MGP_CBAJ_T0035634.1 MGP_CBAJ_G0019844.1 mouse_genomes_project 12 121869901 121871114 - MGP_CBAJ_P0035634 Gm266 protein_coding protein_coding MGP_CBAJ_T0003351.1 MGP_CBAJ_G0003078.1 mouse_genomes_project 12 119206004 119206473 + Gm28498 antisense antisense MGP_CBAJ_T0034699.1 MGP_CBAJ_G0019544.1 mouse_genomes_project 12 77918149 77923148 + MGP_CBAJ_P0034699 Six6 protein_coding protein_coding MGP_CBAJ_T0034320.1 MGP_CBAJ_G0019406.1 mouse_genomes_project 12 36343105 36348215 + Agr2 protein_coding retained_intron MGP_CBAJ_T0034321.1 MGP_CBAJ_G0019406.1 mouse_genomes_project 12 36343105 36354293 + MGP_CBAJ_P0034321 Agr2 protein_coding protein_coding MGP_CBAJ_T0034025.1 MGP_CBAJ_G0019297.1 mouse_genomes_project 12 2151265 2185631 - MGP_CBAJ_P0034025 Ubxn2a protein_coding protein_coding MGP_CBAJ_T0034026.1 MGP_CBAJ_G0019297.1 mouse_genomes_project 12 2151582 2185243 - MGP_CBAJ_P0034026 Ubxn2a protein_coding protein_coding MGP_CBAJ_T0034027.1 MGP_CBAJ_G0019297.1 mouse_genomes_project 12 2152623 2185418 - MGP_CBAJ_P0034027 Ubxn2a protein_coding nonsense_mediated_decay MGP_CBAJ_T0097763.1 MGP_CBAJ_G0036036.1 mouse_genomes_project 12 90553543 90554154 - pseudogene pseudogene MGP_CBAJ_T0097760.1 MGP_CBAJ_G0036033.1 mouse_genomes_project 12 7312209 7312763 + pseudogene pseudogene MGP_CBAJ_T0035226.1 MGP_CBAJ_G0019712.1 mouse_genomes_project 12 98399392 98815522 - MGP_CBAJ_P0035226 Cep128 protein_coding protein_coding MGP_CBAJ_T0035227.1 MGP_CBAJ_G0019712.1 mouse_genomes_project 12 98399392 98685364 - MGP_CBAJ_P0035227 Cep128 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035228.1 MGP_CBAJ_G0019712.1 mouse_genomes_project 12 98400240 98467002 - Cep128 protein_coding processed_transcript MGP_CBAJ_T0035229.1 MGP_CBAJ_G0019712.1 mouse_genomes_project 12 98400242 98431556 - Cep128 protein_coding processed_transcript MGP_CBAJ_T0035230.1 MGP_CBAJ_G0019712.1 mouse_genomes_project 12 98400242 98431556 - Cep128 protein_coding processed_transcript MGP_CBAJ_T0035231.1 MGP_CBAJ_G0019712.1 mouse_genomes_project 12 98400465 98597666 - Cep128 protein_coding processed_transcript MGP_CBAJ_T0035232.1 MGP_CBAJ_G0019712.1 mouse_genomes_project 12 98423905 98597719 - Cep128 protein_coding processed_transcript MGP_CBAJ_T0035233.1 MGP_CBAJ_G0019712.1 mouse_genomes_project 12 98631149 98678471 - MGP_CBAJ_P0035233 Cep128 protein_coding protein_coding MGP_CBAJ_T0035234.1 MGP_CBAJ_G0019712.1 mouse_genomes_project 12 98710519 98815522 - Cep128 protein_coding retained_intron MGP_CBAJ_T0035235.1 MGP_CBAJ_G0019712.1 mouse_genomes_project 12 98744117 98759774 - Cep128 protein_coding processed_transcript MGP_CBAJ_T0035236.1 MGP_CBAJ_G0019712.1 mouse_genomes_project 12 98767313 98815472 - Cep128 protein_coding retained_intron MGP_CBAJ_T0035237.1 MGP_CBAJ_G0019712.1 mouse_genomes_project 12 98769135 98815522 - Cep128 protein_coding processed_transcript MGP_CBAJ_T0035238.1 MGP_CBAJ_G0019712.1 mouse_genomes_project 12 98791832 98815466 - Cep128 protein_coding retained_intron MGP_CBAJ_T0012650.1 MGP_CBAJ_G0010762.1 mouse_genomes_project 12 62475487 62476715 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017080.1 MGP_CBAJ_G0014983.1 mouse_genomes_project 12 128702866 128709540 - Gm10421 processed_transcript antisense MGP_CBAJ_T0017081.1 MGP_CBAJ_G0014983.1 mouse_genomes_project 12 128703708 128709594 - Gm10421 processed_transcript retained_intron MGP_CBAJ_T0017082.1 MGP_CBAJ_G0014983.1 mouse_genomes_project 12 128709414 128709976 - Gm10421 processed_transcript antisense MGP_CBAJ_T0000835.1 MGP_CBAJ_G0000771.1 mouse_genomes_project 12 119858388 119867233 + TEC TEC MGP_CBAJ_T0034721.1 MGP_CBAJ_G0019553.1 mouse_genomes_project 12 79072333 79097656 + MGP_CBAJ_P0034721 Hif1a protein_coding protein_coding MGP_CBAJ_T0034722.1 MGP_CBAJ_G0019553.1 mouse_genomes_project 12 79072719 79112047 + MGP_CBAJ_P0034722 Hif1a protein_coding protein_coding MGP_CBAJ_T0034723.1 MGP_CBAJ_G0019553.1 mouse_genomes_project 12 79091151 79093083 + Hif1a protein_coding retained_intron MGP_CBAJ_T0034724.1 MGP_CBAJ_G0019553.1 mouse_genomes_project 12 79102359 79104563 + Hif1a protein_coding processed_transcript MGP_CBAJ_T0034461.1 MGP_CBAJ_G0019463.1 mouse_genomes_project 12 58241305 58242963 + MGP_CBAJ_P0034461 Aldoart2 protein_coding protein_coding MGP_CBAJ_T0099976.1 MGP_CBAJ_G0038231.1 mouse_genomes_project 12 23893986 23894115 + Gm26211 snoRNA snoRNA MGP_CBAJ_T0034003.1 MGP_CBAJ_G0019287.1 mouse_genomes_project 12 1836366 1836468 - MGP_CBAJ_P0034003 Gm3625 protein_coding protein_coding MGP_CBAJ_T0000006.1 MGP_CBAJ_G0000004.1 mouse_genomes_project 12 123906772 123908847 - MGP_CBAJ_P0000006 Ighe IG_C_gene IG_C_gene MGP_CBAJ_T0000023.1 MGP_CBAJ_G0000017.1 mouse_genomes_project 12 124101336 124101347 - MGP_CBAJ_P0000023 Ighd4-1 IG_D_gene IG_D_gene MGP_CBAJ_T0009699.1 MGP_CBAJ_G0007837.1 mouse_genomes_project 12 111572590 111572683 - Mir1936 miRNA miRNA MGP_CBAJ_T0034318.1 MGP_CBAJ_G0019405.1 mouse_genomes_project 12 36270034 36294097 + MGP_CBAJ_P0034318 Agr3 protein_coding protein_coding MGP_CBAJ_T0034319.1 MGP_CBAJ_G0019405.1 mouse_genomes_project 12 36270036 36272786 + MGP_CBAJ_P0034319 Agr3 protein_coding protein_coding MGP_CBAJ_T0009769.1 MGP_CBAJ_G0007907.1 mouse_genomes_project 12 119932457 119932536 + Mir409 miRNA miRNA MGP_CBAJ_T0006357.1 MGP_CBAJ_G0005291.1 mouse_genomes_project 12 108703371 108704198 - Gm26723 lincRNA lincRNA MGP_CBAJ_T0009695.1 MGP_CBAJ_G0007833.1 mouse_genomes_project 12 98528509 98531780 + miRNA miRNA MGP_CBAJ_T0009700.1 MGP_CBAJ_G0007838.1 mouse_genomes_project 12 111905388 111905523 + Gm44324 miRNA miRNA MGP_CBAJ_T0006372.1 MGP_CBAJ_G0005302.1 mouse_genomes_project 12 116782457 116787516 - lincRNA lincRNA MGP_CBAJ_T0009758.1 MGP_CBAJ_G0007896.1 mouse_genomes_project 12 119918619 119918697 + Mir544 miRNA miRNA MGP_CBAJ_T0034596.1 MGP_CBAJ_G0019512.1 mouse_genomes_project 12 74253344 74292999 - MGP_CBAJ_P0034596 L2hgdh protein_coding protein_coding MGP_CBAJ_T0000063.1 MGP_CBAJ_G0000049.1 mouse_genomes_project 12 124726756 124727261 - MGP_CBAJ_P0000063 Ighv7-1 IG_V_gene IG_V_gene MGP_CBAJ_T0000122.1 MGP_CBAJ_G0000091.1 mouse_genomes_project 12 127364163 127364704 - MGP_CBAJ_P0000122 Ighv1-81 IG_V_gene IG_V_gene MGP_CBAJ_T0000825.1 MGP_CBAJ_G0000761.1 mouse_genomes_project 12 64239623 64254911 + TEC TEC MGP_CBAJ_T0006305.1 MGP_CBAJ_G0005250.1 mouse_genomes_project 12 14407584 14483866 + Gm5432 lincRNA lincRNA MGP_CBAJ_T0000222.1 MGP_CBAJ_G0000167.1 mouse_genomes_project 12 124632949 124633264 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0034304.1 MGP_CBAJ_G0019396.1 mouse_genomes_project 12 33477173 33486972 + MGP_CBAJ_P0034304 Twistnb protein_coding protein_coding MGP_CBAJ_T0009720.1 MGP_CBAJ_G0007858.1 mouse_genomes_project 12 119780373 119780443 + Mir127 miRNA miRNA MGP_CBAJ_T0097927.1 MGP_CBAJ_G0036200.1 mouse_genomes_project 12 71775721 71775840 - n-R5s60 rRNA rRNA MGP_CBAJ_T0035546.1 MGP_CBAJ_G0019820.1 mouse_genomes_project 12 119000616 119033721 - MGP_CBAJ_P0035546 Wars protein_coding protein_coding MGP_CBAJ_T0035547.1 MGP_CBAJ_G0019820.1 mouse_genomes_project 12 119000616 119034686 - MGP_CBAJ_P0035547 Wars protein_coding protein_coding MGP_CBAJ_T0035548.1 MGP_CBAJ_G0019820.1 mouse_genomes_project 12 119000616 119034649 - MGP_CBAJ_P0035548 Wars protein_coding nonsense_mediated_decay MGP_CBAJ_T0035549.1 MGP_CBAJ_G0019820.1 mouse_genomes_project 12 119000620 119033720 - MGP_CBAJ_P0035549 Wars protein_coding protein_coding MGP_CBAJ_T0035550.1 MGP_CBAJ_G0019820.1 mouse_genomes_project 12 119006671 119015748 - Wars protein_coding retained_intron MGP_CBAJ_T0035551.1 MGP_CBAJ_G0019820.1 mouse_genomes_project 12 119015580 119034613 - MGP_CBAJ_P0035551 Wars protein_coding nonsense_mediated_decay MGP_CBAJ_T0035552.1 MGP_CBAJ_G0019820.1 mouse_genomes_project 12 119021247 119028942 - Wars protein_coding retained_intron MGP_CBAJ_T0009671.1 MGP_CBAJ_G0007809.1 mouse_genomes_project 12 37449575 37449676 - Gm44326 miRNA miRNA MGP_CBAJ_T0034198.1 MGP_CBAJ_G0019362.1 mouse_genomes_project 12 28281206 28286318 - MGP_CBAJ_P0034198 Rps7 protein_coding protein_coding MGP_CBAJ_T0034014.1 MGP_CBAJ_G0019294.1 mouse_genomes_project 12 2100739 2109160 - MGP_CBAJ_P0034014 Fkbp1b protein_coding protein_coding MGP_CBAJ_T0034984.1 MGP_CBAJ_G0019642.1 mouse_genomes_project 12 90605273 90630891 + Dnal1 protein_coding processed_transcript MGP_CBAJ_T0034985.1 MGP_CBAJ_G0019642.1 mouse_genomes_project 12 90605273 90636896 + MGP_CBAJ_P0034985 Dnal1 protein_coding protein_coding MGP_CBAJ_T0034986.1 MGP_CBAJ_G0019642.1 mouse_genomes_project 12 90605278 90629510 + MGP_CBAJ_P0034986 Dnal1 protein_coding protein_coding MGP_CBAJ_T0034987.1 MGP_CBAJ_G0019642.1 mouse_genomes_project 12 90605297 90631646 + MGP_CBAJ_P0034987 Dnal1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034988.1 MGP_CBAJ_G0019642.1 mouse_genomes_project 12 90605298 90625039 + MGP_CBAJ_P0034988 Dnal1 protein_coding protein_coding MGP_CBAJ_T0034989.1 MGP_CBAJ_G0019642.1 mouse_genomes_project 12 90617962 90640877 + Dnal1 protein_coding retained_intron MGP_CBAJ_T0034990.1 MGP_CBAJ_G0019642.1 mouse_genomes_project 12 90626731 90628171 + MGP_CBAJ_P0034990 Dnal1 protein_coding protein_coding MGP_CBAJ_T0009778.1 MGP_CBAJ_G0007916.1 mouse_genomes_project 12 122633166 122633242 + Mir203 miRNA miRNA MGP_CBAJ_T0035102.1 MGP_CBAJ_G0019679.1 mouse_genomes_project 12 92540081 92549133 - MGP_CBAJ_P0035102 0610007P14Rik protein_coding protein_coding MGP_CBAJ_T0035103.1 MGP_CBAJ_G0019679.1 mouse_genomes_project 12 92540292 92549123 - 0610007P14Rik protein_coding processed_transcript MGP_CBAJ_T0035104.1 MGP_CBAJ_G0019679.1 mouse_genomes_project 12 92543707 92549155 - 0610007P14Rik protein_coding retained_intron MGP_CBAJ_T0035105.1 MGP_CBAJ_G0019679.1 mouse_genomes_project 12 92543942 92546861 - 0610007P14Rik protein_coding retained_intron MGP_CBAJ_T0035106.1 MGP_CBAJ_G0019679.1 mouse_genomes_project 12 92544149 92549161 - MGP_CBAJ_P0035106 0610007P14Rik protein_coding protein_coding MGP_CBAJ_T0035431.1 MGP_CBAJ_G0019772.1 mouse_genomes_project 12 112682846 112690170 - MGP_CBAJ_P0035431 Serpina16 protein_coding protein_coding MGP_CBAJ_T0035432.1 MGP_CBAJ_G0019772.1 mouse_genomes_project 12 112682934 112689495 - MGP_CBAJ_P0035432 Serpina16 protein_coding protein_coding MGP_CBAJ_T0035038.1 MGP_CBAJ_G0019655.1 mouse_genomes_project 12 91176110 91191124 - MGP_CBAJ_P0035038 Abcd4 protein_coding protein_coding MGP_CBAJ_T0034538.1 MGP_CBAJ_G0019486.1 mouse_genomes_project 12 66353793 66354216 + MGP_CBAJ_P0034538 Spanxn4 protein_coding protein_coding MGP_CBAJ_T0035766.1 MGP_CBAJ_G0019891.1 mouse_genomes_project 12 127778038 127880377 + MGP_CBAJ_P0035766 Esyt2 protein_coding protein_coding MGP_CBAJ_T0035345.1 MGP_CBAJ_G0019743.1 mouse_genomes_project 12 110701945 110749096 - MGP_CBAJ_P0035345 Atxn3 protein_coding protein_coding MGP_CBAJ_T0035346.1 MGP_CBAJ_G0019743.1 mouse_genomes_project 12 110706123 110717557 - MGP_CBAJ_P0035346 Atxn3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035347.1 MGP_CBAJ_G0019743.1 mouse_genomes_project 12 110716126 110749093 - MGP_CBAJ_P0035347 Atxn3 protein_coding protein_coding MGP_CBAJ_T0035348.1 MGP_CBAJ_G0019743.1 mouse_genomes_project 12 110716128 110749093 - MGP_CBAJ_P0035348 Atxn3 protein_coding protein_coding MGP_CBAJ_T0035349.1 MGP_CBAJ_G0019743.1 mouse_genomes_project 12 110716151 110748998 - MGP_CBAJ_P0035349 Atxn3 protein_coding protein_coding MGP_CBAJ_T0035371.1 MGP_CBAJ_G0019751.1 mouse_genomes_project 12 111613398 111658816 - MGP_CBAJ_P0035371 Gm28051 protein_coding protein_coding MGP_CBAJ_T0098271.1 MGP_CBAJ_G0036541.1 mouse_genomes_project 12 46275244 46290497 - Gm15902 sense_intronic sense_intronic MGP_CBAJ_T0034835.1 MGP_CBAJ_G0019598.1 mouse_genomes_project 12 85121464 85378796 + MGP_CBAJ_P0034835 Rad51b protein_coding protein_coding MGP_CBAJ_T0034836.1 MGP_CBAJ_G0019598.1 mouse_genomes_project 12 85121464 85156341 + MGP_CBAJ_P0034836 Rad51b protein_coding protein_coding MGP_CBAJ_T0034002.1 MGP_CBAJ_G0019286.1 mouse_genomes_project 12 1414061 1690060 - MGP_CBAJ_P0034002 Ncoa1 protein_coding protein_coding MGP_CBAJ_T0003340.1 MGP_CBAJ_G0003069.1 mouse_genomes_project 12 91521789 91522880 + Gm17139 antisense antisense MGP_CBAJ_T0003337.1 MGP_CBAJ_G0003066.1 mouse_genomes_project 12 89197559 89204193 - 1700085C21Rik antisense antisense MGP_CBAJ_T0034730.1 MGP_CBAJ_G0019558.1 mouse_genomes_project 12 80210351 80518272 - MGP_CBAJ_P0034730 Kcnh5 protein_coding protein_coding MGP_CBAJ_T0034035.1 MGP_CBAJ_G0019301.1 mouse_genomes_project 12 5910698 5995549 + MGP_CBAJ_P0034035 Ldah protein_coding protein_coding MGP_CBAJ_T0009786.1 MGP_CBAJ_G0007924.1 mouse_genomes_project 12 127735734 127735790 - Gm23190 miRNA miRNA MGP_CBAJ_T0000226.1 MGP_CBAJ_G0000171.1 mouse_genomes_project 12 124776848 124777312 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0006371.1 MGP_CBAJ_G0005301.1 mouse_genomes_project 12 116655493 116700799 + 1700013N06Rik lincRNA lincRNA MGP_CBAJ_T0009698.1 MGP_CBAJ_G0007836.1 mouse_genomes_project 12 109600682 109600779 - Mir1190 miRNA miRNA MGP_CBAJ_T0009692.1 MGP_CBAJ_G0007830.1 mouse_genomes_project 12 94351378 94351457 - Mir3068 miRNA miRNA MGP_CBAJ_T0012652.1 MGP_CBAJ_G0010764.1 mouse_genomes_project 12 64933775 64934303 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012662.1 MGP_CBAJ_G0010774.1 mouse_genomes_project 12 86047333 86048228 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098743.1 MGP_CBAJ_G0036998.1 mouse_genomes_project 12 11856362 11856469 - Gm24142 snRNA snRNA MGP_CBAJ_T0006392.1 MGP_CBAJ_G0005312.1 mouse_genomes_project 12 119756199 119759295 - Gm26906 lincRNA lincRNA MGP_CBAJ_T0034812.1 MGP_CBAJ_G0019587.1 mouse_genomes_project 12 84644990 84670130 + MGP_CBAJ_P0034812 Eif2s1 protein_coding protein_coding MGP_CBAJ_T0000032.1 MGP_CBAJ_G0000025.1 mouse_genomes_project 12 124099321 124099375 - MGP_CBAJ_P0000032 Ighj4 IG_J_gene IG_J_gene MGP_CBAJ_T0034829.1 MGP_CBAJ_G0019596.1 mouse_genomes_project 12 85032022 85045750 + MGP_CBAJ_P0034829 Rdh12 protein_coding protein_coding MGP_CBAJ_T0034830.1 MGP_CBAJ_G0019596.1 mouse_genomes_project 12 85032039 85045749 + MGP_CBAJ_P0034830 Rdh12 protein_coding protein_coding MGP_CBAJ_T0034831.1 MGP_CBAJ_G0019596.1 mouse_genomes_project 12 85032055 85045749 + Rdh12 protein_coding retained_intron MGP_CBAJ_T0034832.1 MGP_CBAJ_G0019596.1 mouse_genomes_project 12 85032505 85045150 + MGP_CBAJ_P0034832 Rdh12 protein_coding unknown_likely_coding MGP_CBAJ_T0034833.1 MGP_CBAJ_G0019596.1 mouse_genomes_project 12 85033769 85035864 + MGP_CBAJ_P0034833 Rdh12 protein_coding protein_coding MGP_CBAJ_T0000036.1 MGP_CBAJ_G0000028.1 mouse_genomes_project 12 124100589 124100642 - MGP_CBAJ_P0000036 Ighj1 IG_J_gene IG_J_gene MGP_CBAJ_T0034191.1 MGP_CBAJ_G0019358.1 mouse_genomes_project 12 26790458 26801254 - MGP_CBAJ_P0034191 Sox11 protein_coding protein_coding MGP_CBAJ_T0097919.1 MGP_CBAJ_G0036192.1 mouse_genomes_project 12 10976130 10976235 - Gm27952 rRNA rRNA MGP_CBAJ_T0034334.1 MGP_CBAJ_G0019415.1 mouse_genomes_project 12 37573741 37644385 + MGP_CBAJ_P0034334 Meox2 protein_coding protein_coding MGP_CBAJ_T0035571.1 MGP_CBAJ_G0019826.1 mouse_genomes_project 12 120727569 120869111 + MGP_CBAJ_P0035571 Ppp2r5c protein_coding unknown_likely_coding MGP_CBAJ_T0035572.1 MGP_CBAJ_G0019826.1 mouse_genomes_project 12 120766842 120880465 + MGP_CBAJ_P0035572 Ppp2r5c protein_coding protein_coding MGP_CBAJ_T0035573.1 MGP_CBAJ_G0019826.1 mouse_genomes_project 12 120766842 120880465 + MGP_CBAJ_P0035573 Ppp2r5c protein_coding protein_coding MGP_CBAJ_T0000235.1 MGP_CBAJ_G0000180.1 mouse_genomes_project 12 125173248 125173539 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0000026.1 MGP_CBAJ_G0000019.1 mouse_genomes_project 12 124114958 124114974 - MGP_CBAJ_P0000026 Ighd3-2 IG_D_gene IG_D_gene MGP_CBAJ_T0035670.1 MGP_CBAJ_G0019856.1 mouse_genomes_project 12 122463315 122563332 + MGP_CBAJ_P0035670 Tdrd9 protein_coding protein_coding MGP_CBAJ_T0035671.1 MGP_CBAJ_G0019856.1 mouse_genomes_project 12 122463398 122562754 + MGP_CBAJ_P0035671 Tdrd9 protein_coding unknown_likely_coding MGP_CBAJ_T0035677.1 MGP_CBAJ_G0019856.1 mouse_genomes_project 12 122473298 122562754 + MGP_CBAJ_P0035677 Tdrd9 protein_coding unknown_likely_coding MGP_CBAJ_T0035678.1 MGP_CBAJ_G0019856.1 mouse_genomes_project 12 122485456 122562824 + MGP_CBAJ_P0035678 Tdrd9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035679.1 MGP_CBAJ_G0019856.1 mouse_genomes_project 12 122485456 122562824 + MGP_CBAJ_P0035679 Tdrd9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035680.1 MGP_CBAJ_G0019856.1 mouse_genomes_project 12 122504577 122512720 + Tdrd9 protein_coding retained_intron MGP_CBAJ_T0035681.1 MGP_CBAJ_G0019856.1 mouse_genomes_project 12 122513163 122527665 + Tdrd9 protein_coding processed_transcript MGP_CBAJ_T0035682.1 MGP_CBAJ_G0019856.1 mouse_genomes_project 12 122557406 122562003 + Tdrd9 protein_coding retained_intron MGP_CBAJ_T0035322.1 MGP_CBAJ_G0019736.1 mouse_genomes_project 12 109429154 109470299 - MGP_CBAJ_P0035322 Gpr68 protein_coding protein_coding MGP_CBAJ_T0035323.1 MGP_CBAJ_G0019736.1 mouse_genomes_project 12 109429157 109470282 - MGP_CBAJ_P0035323 Gpr68 protein_coding protein_coding MGP_CBAJ_T0035324.1 MGP_CBAJ_G0019736.1 mouse_genomes_project 12 109429157 109461598 - MGP_CBAJ_P0035324 Gpr68 protein_coding protein_coding MGP_CBAJ_T0035325.1 MGP_CBAJ_G0019736.1 mouse_genomes_project 12 109431788 109461572 - Gpr68 protein_coding processed_transcript MGP_CBAJ_T0035327.1 MGP_CBAJ_G0019736.1 mouse_genomes_project 12 109446435 109470299 - Gpr68 protein_coding processed_transcript MGP_CBAJ_T0035328.1 MGP_CBAJ_G0019736.1 mouse_genomes_project 12 109446623 109461598 - Gpr68 protein_coding processed_transcript MGP_CBAJ_T0006381.1 MGP_CBAJ_G0005310.1 mouse_genomes_project 12 118613075 118632648 - Gm16596 lincRNA lincRNA MGP_CBAJ_T0000244.1 MGP_CBAJ_G0000189.1 mouse_genomes_project 12 125988521 125988954 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0006353.1 MGP_CBAJ_G0005287.1 mouse_genomes_project 12 98149963 98367040 - 4930544I03Rik lincRNA lincRNA MGP_CBAJ_T0097929.1 MGP_CBAJ_G0036202.1 mouse_genomes_project 12 88326526 88326622 + n-R5s62 rRNA rRNA MGP_CBAJ_T0034379.1 MGP_CBAJ_G0019426.1 mouse_genomes_project 12 42016020 43061556 + MGP_CBAJ_P0034379 Immp2l protein_coding protein_coding MGP_CBAJ_T0034380.1 MGP_CBAJ_G0019426.1 mouse_genomes_project 12 42016056 42063164 + Immp2l protein_coding retained_intron MGP_CBAJ_T0034381.1 MGP_CBAJ_G0019426.1 mouse_genomes_project 12 42016057 42112114 + Immp2l protein_coding retained_intron MGP_CBAJ_T0034382.1 MGP_CBAJ_G0019426.1 mouse_genomes_project 12 42016259 43061210 + MGP_CBAJ_P0034382 Immp2l protein_coding protein_coding MGP_CBAJ_T0034383.1 MGP_CBAJ_G0019426.1 mouse_genomes_project 12 42062590 42112100 + MGP_CBAJ_P0034383 Immp2l protein_coding protein_coding MGP_CBAJ_T0034138.1 MGP_CBAJ_G0019338.1 mouse_genomes_project 12 16087881 16182084 + MGP_CBAJ_P0034138 Nol10 protein_coding protein_coding MGP_CBAJ_T0035030.1 MGP_CBAJ_G0019650.1 mouse_genomes_project 12 90946302 90976832 + MGP_CBAJ_P0035030 Bbof1 protein_coding protein_coding MGP_CBAJ_T0035031.1 MGP_CBAJ_G0019650.1 mouse_genomes_project 12 90956631 90971473 + MGP_CBAJ_P0035031 Bbof1 protein_coding protein_coding MGP_CBAJ_T0035033.1 MGP_CBAJ_G0019650.1 mouse_genomes_project 12 90963216 90973432 + MGP_CBAJ_P0035033 Bbof1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034657.1 MGP_CBAJ_G0019531.1 mouse_genomes_project 12 76084511 76094737 + MGP_CBAJ_P0034657 Dact1 protein_coding protein_coding MGP_CBAJ_T0034658.1 MGP_CBAJ_G0019531.1 mouse_genomes_project 12 76084611 76093525 + MGP_CBAJ_P0034658 Dact1 protein_coding protein_coding MGP_CBAJ_T0034892.1 MGP_CBAJ_G0019617.1 mouse_genomes_project 12 87627893 87633861 - Synj2bp protein_coding retained_intron MGP_CBAJ_T0034893.1 MGP_CBAJ_G0019617.1 mouse_genomes_project 12 87628123 87660705 - MGP_CBAJ_P0034893 Synj2bp protein_coding protein_coding MGP_CBAJ_T0034894.1 MGP_CBAJ_G0019617.1 mouse_genomes_project 12 87633019 87640328 - MGP_CBAJ_P0034894 Synj2bp protein_coding protein_coding MGP_CBAJ_T0034895.1 MGP_CBAJ_G0019617.1 mouse_genomes_project 12 87633149 87660806 - MGP_CBAJ_P0034895 Synj2bp protein_coding protein_coding MGP_CBAJ_T0033984.1 MGP_CBAJ_G0019281.1 mouse_genomes_project 12 1075213 1167011 - MGP_CBAJ_P0033984 Efr3b protein_coding protein_coding MGP_CBAJ_T0006382.1 MGP_CBAJ_G0005311.1 mouse_genomes_project 12 119726417 119730731 + Meg3 lincRNA lincRNA MGP_CBAJ_T0006383.1 MGP_CBAJ_G0005311.1 mouse_genomes_project 12 119726421 119759293 + Meg3 lincRNA lincRNA MGP_CBAJ_T0006384.1 MGP_CBAJ_G0005311.1 mouse_genomes_project 12 119726423 119746752 + Meg3 lincRNA lincRNA MGP_CBAJ_T0006385.1 MGP_CBAJ_G0005311.1 mouse_genomes_project 12 119727439 119749247 + Meg3 lincRNA lincRNA MGP_CBAJ_T0006386.1 MGP_CBAJ_G0005311.1 mouse_genomes_project 12 119729911 119745883 + Meg3 lincRNA lincRNA MGP_CBAJ_T0006387.1 MGP_CBAJ_G0005311.1 mouse_genomes_project 12 119732332 119759298 + Meg3 lincRNA lincRNA MGP_CBAJ_T0006388.1 MGP_CBAJ_G0005311.1 mouse_genomes_project 12 119733317 119759291 + Meg3 lincRNA lincRNA MGP_CBAJ_T0006389.1 MGP_CBAJ_G0005311.1 mouse_genomes_project 12 119733371 119759294 + Meg3 lincRNA lincRNA MGP_CBAJ_T0006390.1 MGP_CBAJ_G0005311.1 mouse_genomes_project 12 119736738 119746366 + Meg3 lincRNA lincRNA MGP_CBAJ_T0006391.1 MGP_CBAJ_G0005311.1 mouse_genomes_project 12 119736834 119737355 + Meg3 lincRNA lincRNA MGP_CBAJ_T0098742.1 MGP_CBAJ_G0036997.1 mouse_genomes_project 12 10993646 10993753 + Gm25538 snRNA snRNA MGP_CBAJ_T0009709.1 MGP_CBAJ_G0007847.1 mouse_genomes_project 12 119751267 119751361 + Mir770 miRNA miRNA MGP_CBAJ_T0098750.1 MGP_CBAJ_G0037005.1 mouse_genomes_project 12 53901986 53902088 - Gm22663 snRNA snRNA MGP_CBAJ_T0034775.1 MGP_CBAJ_G0019572.1 mouse_genomes_project 12 81925296 81949187 + MGP_CBAJ_P0034775 Ppp1r36 protein_coding protein_coding MGP_CBAJ_T0100030.1 MGP_CBAJ_G0038285.1 mouse_genomes_project 12 119869592 119869661 + AF357428 snoRNA snoRNA MGP_CBAJ_T0035155.1 MGP_CBAJ_G0019690.1 mouse_genomes_project 12 93881927 93890143 - MGP_CBAJ_P0035155 Zdhhc22 protein_coding protein_coding MGP_CBAJ_T0034875.1 MGP_CBAJ_G0019613.1 mouse_genomes_project 12 87453703 87660831 - MGP_CBAJ_P0034875 Gm20498 protein_coding protein_coding MGP_CBAJ_T0034880.1 MGP_CBAJ_G0019613.1 mouse_genomes_project 12 87593467 87660808 - MGP_CBAJ_P0034880 Gm20498 protein_coding protein_coding MGP_CBAJ_T0034887.1 MGP_CBAJ_G0019613.1 mouse_genomes_project 12 87597419 87660803 - MGP_CBAJ_P0034887 Gm20498 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034888.1 MGP_CBAJ_G0019613.1 mouse_genomes_project 12 87597455 87660687 - Gm20498 protein_coding processed_transcript MGP_CBAJ_T0034889.1 MGP_CBAJ_G0019613.1 mouse_genomes_project 12 87597477 87660803 - Gm20498 protein_coding processed_transcript MGP_CBAJ_T0034891.1 MGP_CBAJ_G0019613.1 mouse_genomes_project 12 87605941 87660803 - Gm20498 protein_coding processed_transcript MGP_CBAJ_T0009703.1 MGP_CBAJ_G0007841.1 mouse_genomes_project 12 118747656 118747754 + Mir342 miRNA miRNA MGP_CBAJ_T0035165.1 MGP_CBAJ_G0019694.1 mouse_genomes_project 12 94058884 94077362 + MGP_CBAJ_P0035165 Gstz1 protein_coding protein_coding MGP_CBAJ_T0035166.1 MGP_CBAJ_G0019694.1 mouse_genomes_project 12 94070291 94079832 + MGP_CBAJ_P0035166 Gstz1 protein_coding unknown_likely_coding MGP_CBAJ_T0035790.1 MGP_CBAJ_G0019901.1 mouse_genomes_project 12 131238238 131286192 + MGP_CBAJ_P0035790 Macc1 protein_coding protein_coding MGP_CBAJ_T0003319.1 MGP_CBAJ_G0003052.1 mouse_genomes_project 12 56433822 56451138 - 1700060O08Rik antisense antisense MGP_CBAJ_T0012694.1 MGP_CBAJ_G0010806.1 mouse_genomes_project 12 125089497 125090133 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099978.1 MGP_CBAJ_G0038233.1 mouse_genomes_project 12 27955684 27955816 + Gm25564 snoRNA snoRNA MGP_CBAJ_T0000232.1 MGP_CBAJ_G0000177.1 mouse_genomes_project 12 125142236 125142669 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0012631.1 MGP_CBAJ_G0010743.1 mouse_genomes_project 12 2955483 2956369 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098188.1 MGP_CBAJ_G0036461.1 mouse_genomes_project 12 114415954 114416229 - Scarna13 scaRNA scaRNA MGP_CBAJ_T0000069.1 MGP_CBAJ_G0000054.1 mouse_genomes_project 12 124832349 124832779 - MGP_CBAJ_P0000069 Ighv14-2 IG_V_gene IG_V_gene MGP_CBAJ_T0034767.1 MGP_CBAJ_G0019569.1 mouse_genomes_project 12 81849046 81858243 - MGP_CBAJ_P0034767 Zbtb25 protein_coding protein_coding MGP_CBAJ_T0034768.1 MGP_CBAJ_G0019569.1 mouse_genomes_project 12 81850170 81872190 - MGP_CBAJ_P0034768 Zbtb25 protein_coding protein_coding MGP_CBAJ_T0034769.1 MGP_CBAJ_G0019569.1 mouse_genomes_project 12 81850214 81871725 - MGP_CBAJ_P0034769 Zbtb25 protein_coding protein_coding MGP_CBAJ_T0034770.1 MGP_CBAJ_G0019569.1 mouse_genomes_project 12 81850215 81872328 - MGP_CBAJ_P0034770 Zbtb25 protein_coding protein_coding MGP_CBAJ_T0034771.1 MGP_CBAJ_G0019569.1 mouse_genomes_project 12 81851296 81872119 - MGP_CBAJ_P0034771 Zbtb25 protein_coding protein_coding MGP_CBAJ_T0034772.1 MGP_CBAJ_G0019569.1 mouse_genomes_project 12 81851413 81872190 - MGP_CBAJ_P0034772 Zbtb25 protein_coding protein_coding MGP_CBAJ_T0035441.1 MGP_CBAJ_G0019775.1 mouse_genomes_project 12 113075806 113097376 - MGP_CBAJ_P0035441 Serpina9 protein_coding protein_coding MGP_CBAJ_T0035442.1 MGP_CBAJ_G0019775.1 mouse_genomes_project 12 113092059 113097479 - MGP_CBAJ_P0035442 Serpina9 protein_coding protein_coding MGP_CBAJ_T0098755.1 MGP_CBAJ_G0037010.1 mouse_genomes_project 12 57175265 57175440 + Gm22513 snRNA snRNA MGP_CBAJ_T0009711.1 MGP_CBAJ_G0007849.1 mouse_genomes_project 12 119767807 119767890 + Mir493 miRNA miRNA MGP_CBAJ_T0009743.1 MGP_CBAJ_G0007881.1 mouse_genomes_project 12 119906364 119906463 + Mir666 miRNA miRNA MGP_CBAJ_T0100012.1 MGP_CBAJ_G0038267.1 mouse_genomes_project 12 111091260 111091476 - Gm25203 snoRNA snoRNA MGP_CBAJ_T0017046.1 MGP_CBAJ_G0014971.1 mouse_genomes_project 12 79091029 79114311 - Gm15283 processed_transcript processed_transcript MGP_CBAJ_T0003325.1 MGP_CBAJ_G0003056.1 mouse_genomes_project 12 60546247 60578530 - 4921518K17Rik antisense antisense MGP_CBAJ_T0034763.1 MGP_CBAJ_G0019567.1 mouse_genomes_project 12 81738193 81811715 + MGP_CBAJ_P0034763 Mthfd1 protein_coding protein_coding MGP_CBAJ_T0034908.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 88802571 89331219 + MGP_CBAJ_P0034908 Rgs6 protein_coding protein_coding MGP_CBAJ_T0034909.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 88841484 89387277 + MGP_CBAJ_P0034909 Rgs6 protein_coding protein_coding MGP_CBAJ_T0034910.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 88841504 89464061 + MGP_CBAJ_P0034910 Rgs6 protein_coding protein_coding MGP_CBAJ_T0034911.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 88841597 89464633 + MGP_CBAJ_P0034911 Rgs6 protein_coding protein_coding MGP_CBAJ_T0034912.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 88842059 89465189 + MGP_CBAJ_P0034912 Rgs6 protein_coding protein_coding MGP_CBAJ_T0034913.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 88842059 89467937 + MGP_CBAJ_P0034913 Rgs6 protein_coding protein_coding MGP_CBAJ_T0034914.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 88842132 89464167 + MGP_CBAJ_P0034914 Rgs6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034915.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 88842147 89352426 + MGP_CBAJ_P0034915 Rgs6 protein_coding protein_coding MGP_CBAJ_T0034916.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 88842195 89334996 + MGP_CBAJ_P0034916 Rgs6 protein_coding protein_coding MGP_CBAJ_T0034917.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 88842214 89463914 + MGP_CBAJ_P0034917 Rgs6 protein_coding protein_coding MGP_CBAJ_T0034918.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 88842409 89334934 + MGP_CBAJ_P0034918 Rgs6 protein_coding protein_coding MGP_CBAJ_T0034919.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 88842585 88843566 + Rgs6 protein_coding retained_intron MGP_CBAJ_T0034920.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 88875013 89439852 + MGP_CBAJ_P0034920 Rgs6 protein_coding protein_coding MGP_CBAJ_T0034921.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 88875013 89463792 + MGP_CBAJ_P0034921 Rgs6 protein_coding protein_coding MGP_CBAJ_T0034922.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 88875013 89463792 + MGP_CBAJ_P0034922 Rgs6 protein_coding protein_coding MGP_CBAJ_T0034923.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 88875013 89439852 + MGP_CBAJ_P0034923 Rgs6 protein_coding protein_coding MGP_CBAJ_T0034924.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 88875013 89439975 + MGP_CBAJ_P0034924 Rgs6 protein_coding protein_coding MGP_CBAJ_T0034925.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 88875013 89435933 + MGP_CBAJ_P0034925 Rgs6 protein_coding protein_coding MGP_CBAJ_T0034926.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 89253156 89467943 + MGP_CBAJ_P0034926 Rgs6 protein_coding protein_coding MGP_CBAJ_T0034927.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 89330616 89331747 + Rgs6 protein_coding retained_intron MGP_CBAJ_T0034928.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 89406248 89464028 + MGP_CBAJ_P0034928 Rgs6 protein_coding protein_coding MGP_CBAJ_T0034929.1 MGP_CBAJ_G0019625.1 mouse_genomes_project 12 89418431 89439804 + Rgs6 protein_coding retained_intron MGP_CBAJ_T0009707.1 MGP_CBAJ_G0007845.1 mouse_genomes_project 12 119492340 119492407 - Gm25297 miRNA miRNA MGP_CBAJ_T0035650.1 MGP_CBAJ_G0019851.1 mouse_genomes_project 12 122210668 122269839 + MGP_CBAJ_P0035650 Klc1 protein_coding protein_coding MGP_CBAJ_T0035651.1 MGP_CBAJ_G0019851.1 mouse_genomes_project 12 122210775 122254646 + MGP_CBAJ_P0035651 Klc1 protein_coding protein_coding MGP_CBAJ_T0035652.1 MGP_CBAJ_G0019851.1 mouse_genomes_project 12 122210832 122269791 + MGP_CBAJ_P0035652 Klc1 protein_coding protein_coding MGP_CBAJ_T0035653.1 MGP_CBAJ_G0019851.1 mouse_genomes_project 12 122223636 122254644 + MGP_CBAJ_P0035653 Klc1 protein_coding protein_coding MGP_CBAJ_T0035654.1 MGP_CBAJ_G0019851.1 mouse_genomes_project 12 122239787 122247370 + Klc1 protein_coding retained_intron MGP_CBAJ_T0035655.1 MGP_CBAJ_G0019851.1 mouse_genomes_project 12 122248913 122254147 + Klc1 protein_coding processed_transcript MGP_CBAJ_T0035656.1 MGP_CBAJ_G0019851.1 mouse_genomes_project 12 122255102 122269790 + Klc1 protein_coding retained_intron MGP_CBAJ_T0035662.1 MGP_CBAJ_G0019851.1 mouse_genomes_project 12 122268570 122269775 + Klc1 protein_coding retained_intron MGP_CBAJ_T0035091.1 MGP_CBAJ_G0019673.1 mouse_genomes_project 12 91931730 91976582 - MGP_CBAJ_P0035091 Nek9 protein_coding protein_coding MGP_CBAJ_T0006311.1 MGP_CBAJ_G0005253.1 mouse_genomes_project 12 28101826 28106061 - 1700022F17Rik lincRNA lincRNA MGP_CBAJ_T0101580.1 MGP_CBAJ_G0039611.1 mouse_genomes_project 12 112927428 112990325 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0035527.1 MGP_CBAJ_G0019814.1 mouse_genomes_project 12 118427468 118583125 + Eml1 protein_coding retained_intron MGP_CBAJ_T0035528.1 MGP_CBAJ_G0019814.1 mouse_genomes_project 12 118467112 118615064 + MGP_CBAJ_P0035528 Eml1 protein_coding protein_coding MGP_CBAJ_T0035529.1 MGP_CBAJ_G0019814.1 mouse_genomes_project 12 118478699 118614208 + MGP_CBAJ_P0035529 Eml1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035530.1 MGP_CBAJ_G0019814.1 mouse_genomes_project 12 118478816 118616265 + MGP_CBAJ_P0035530 Eml1 protein_coding protein_coding MGP_CBAJ_T0035531.1 MGP_CBAJ_G0019814.1 mouse_genomes_project 12 118541732 118616256 + Eml1 protein_coding processed_transcript MGP_CBAJ_T0035532.1 MGP_CBAJ_G0019814.1 mouse_genomes_project 12 118611415 118614103 + Eml1 protein_coding processed_transcript MGP_CBAJ_T0035533.1 MGP_CBAJ_G0019814.1 mouse_genomes_project 12 118611473 118616309 + Eml1 protein_coding processed_transcript MGP_CBAJ_T0012697.1 MGP_CBAJ_G0010809.1 mouse_genomes_project 12 128112433 128112726 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009754.1 MGP_CBAJ_G0007892.1 mouse_genomes_project 12 119916622 119916704 + Mir487b miRNA miRNA MGP_CBAJ_T0034276.1 MGP_CBAJ_G0019389.1 mouse_genomes_project 12 32110369 32148298 - MGP_CBAJ_P0034276 Pik3cg protein_coding nonsense_mediated_decay MGP_CBAJ_T0034277.1 MGP_CBAJ_G0019389.1 mouse_genomes_project 12 32111068 32148346 - MGP_CBAJ_P0034277 Pik3cg protein_coding protein_coding MGP_CBAJ_T0034278.1 MGP_CBAJ_G0019389.1 mouse_genomes_project 12 32112523 32148161 - MGP_CBAJ_P0034278 Pik3cg protein_coding protein_coding MGP_CBAJ_T0034279.1 MGP_CBAJ_G0019389.1 mouse_genomes_project 12 32140245 32140704 - Pik3cg protein_coding retained_intron MGP_CBAJ_T0034799.1 MGP_CBAJ_G0019580.1 mouse_genomes_project 12 82517696 82545711 - MGP_CBAJ_P0034799 Max protein_coding protein_coding MGP_CBAJ_T0034800.1 MGP_CBAJ_G0019580.1 mouse_genomes_project 12 82517696 82545711 - MGP_CBAJ_P0034800 Max protein_coding protein_coding MGP_CBAJ_T0034328.1 MGP_CBAJ_G0019411.1 mouse_genomes_project 12 36589128 36603550 - MGP_CBAJ_P0034328 Lrrc72 protein_coding protein_coding MGP_CBAJ_T0034329.1 MGP_CBAJ_G0019411.1 mouse_genomes_project 12 36590341 36646248 - MGP_CBAJ_P0034329 Lrrc72 protein_coding protein_coding MGP_CBAJ_T0034330.1 MGP_CBAJ_G0019411.1 mouse_genomes_project 12 36593066 36603566 - Lrrc72 protein_coding retained_intron MGP_CBAJ_T0034449.1 MGP_CBAJ_G0019457.1 mouse_genomes_project 12 57583689 57815279 - MGP_CBAJ_P0034449 protein_coding protein_coding MGP_CBAJ_T0034450.1 MGP_CBAJ_G0019457.1 mouse_genomes_project 12 57583704 57593333 - protein_coding retained_intron MGP_CBAJ_T0034451.1 MGP_CBAJ_G0019457.1 mouse_genomes_project 12 57592985 57815277 - protein_coding retained_intron MGP_CBAJ_T0034814.1 MGP_CBAJ_G0019589.1 mouse_genomes_project 12 84756812 84816625 - MGP_CBAJ_P0034814 Tmem229b-ps protein_coding protein_coding MGP_CBAJ_T0034816.1 MGP_CBAJ_G0019589.1 mouse_genomes_project 12 84758343 84816688 - MGP_CBAJ_P0034816 Tmem229b-ps protein_coding protein_coding MGP_CBAJ_T0034817.1 MGP_CBAJ_G0019589.1 mouse_genomes_project 12 84768433 84775935 - Tmem229b-ps protein_coding processed_transcript MGP_CBAJ_T0034818.1 MGP_CBAJ_G0019589.1 mouse_genomes_project 12 84772926 84816011 - Tmem229b-ps protein_coding processed_transcript MGP_CBAJ_T0035097.1 MGP_CBAJ_G0019676.1 mouse_genomes_project 12 92275440 92317933 + MGP_CBAJ_P0035097 Jdp2 protein_coding protein_coding MGP_CBAJ_T0035098.1 MGP_CBAJ_G0019676.1 mouse_genomes_project 12 92275751 92317932 + MGP_CBAJ_P0035098 Jdp2 protein_coding protein_coding MGP_CBAJ_T0035099.1 MGP_CBAJ_G0019676.1 mouse_genomes_project 12 92276353 92317933 + MGP_CBAJ_P0035099 Jdp2 protein_coding protein_coding MGP_CBAJ_T0000116.1 MGP_CBAJ_G0000086.1 mouse_genomes_project 12 126533054 126533345 - MGP_CBAJ_P0000116 Ighv1-62-1 IG_V_gene IG_V_gene MGP_CBAJ_T0011207.1 MGP_CBAJ_G0009345.1 mouse_genomes_project 12 93483237 93483322 + Gm27993 misc_RNA misc_RNA MGP_CBAJ_T0035202.1 MGP_CBAJ_G0019705.1 mouse_genomes_project 12 94555471 94570081 + MGP_CBAJ_P0035202 Gm2042 protein_coding protein_coding MGP_CBAJ_T0035203.1 MGP_CBAJ_G0019705.1 mouse_genomes_project 12 94555554 94570640 + MGP_CBAJ_P0035203 Gm2042 protein_coding protein_coding MGP_CBAJ_T0035205.1 MGP_CBAJ_G0019705.1 mouse_genomes_project 12 94555828 94570158 + MGP_CBAJ_P0035205 Gm2042 protein_coding protein_coding MGP_CBAJ_T0035206.1 MGP_CBAJ_G0019705.1 mouse_genomes_project 12 94555855 94571218 + MGP_CBAJ_P0035206 Gm2042 protein_coding protein_coding MGP_CBAJ_T0035767.1 MGP_CBAJ_G0019892.1 mouse_genomes_project 12 127922129 127983957 + MGP_CBAJ_P0035767 Ncapg2 protein_coding unknown_likely_coding MGP_CBAJ_T0006348.1 MGP_CBAJ_G0005282.1 mouse_genomes_project 12 93067462 93082702 - 4732487G21Rik lincRNA lincRNA MGP_CBAJ_T0035666.1 MGP_CBAJ_G0019853.1 mouse_genomes_project 12 122280207 122296154 + MGP_CBAJ_P0035666 Zfyve21 protein_coding protein_coding MGP_CBAJ_T0034572.1 MGP_CBAJ_G0019501.1 mouse_genomes_project 12 73668349 73670963 + MGP_CBAJ_P0034572 Mgat2 protein_coding protein_coding MGP_CBAJ_T0034432.1 MGP_CBAJ_G0019450.1 mouse_genomes_project 12 56576221 56603698 - MGP_CBAJ_P0034432 Egln3 protein_coding protein_coding MGP_CBAJ_T0034820.1 MGP_CBAJ_G0019592.1 mouse_genomes_project 12 84897576 84906896 - MGP_CBAJ_P0034820 Pigh protein_coding protein_coding MGP_CBAJ_T0035684.1 MGP_CBAJ_G0019859.1 mouse_genomes_project 12 122648920 122687939 + MGP_CBAJ_P0035684 Kif26a protein_coding protein_coding MGP_CBAJ_T0035685.1 MGP_CBAJ_G0019859.1 mouse_genomes_project 12 122685429 122686726 + Kif26a protein_coding processed_transcript MGP_CBAJ_T0035403.1 MGP_CBAJ_G0019763.1 mouse_genomes_project 12 112358990 112378921 + MGP_CBAJ_P0035403 Otub2 protein_coding protein_coding MGP_CBAJ_T0035404.1 MGP_CBAJ_G0019763.1 mouse_genomes_project 12 112359006 112378927 + MGP_CBAJ_P0035404 Otub2 protein_coding protein_coding MGP_CBAJ_T0035405.1 MGP_CBAJ_G0019763.1 mouse_genomes_project 12 112359074 112378927 + Otub2 protein_coding retained_intron MGP_CBAJ_T0035406.1 MGP_CBAJ_G0019763.1 mouse_genomes_project 12 112359293 112375483 + MGP_CBAJ_P0035406 Otub2 protein_coding protein_coding MGP_CBAJ_T0035407.1 MGP_CBAJ_G0019763.1 mouse_genomes_project 12 112362958 112378932 + MGP_CBAJ_P0035407 Otub2 protein_coding protein_coding MGP_CBAJ_T0035064.1 MGP_CBAJ_G0019664.1 mouse_genomes_project 12 91620405 91695592 + MGP_CBAJ_P0035064 Ylpm1 protein_coding protein_coding MGP_CBAJ_T0035065.1 MGP_CBAJ_G0019664.1 mouse_genomes_project 12 91620672 91681903 + MGP_CBAJ_P0035065 Ylpm1 protein_coding unknown_likely_coding MGP_CBAJ_T0035066.1 MGP_CBAJ_G0019664.1 mouse_genomes_project 12 91639186 91695570 + MGP_CBAJ_P0035066 Ylpm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035067.1 MGP_CBAJ_G0019664.1 mouse_genomes_project 12 91666776 91683886 + Ylpm1 protein_coding retained_intron MGP_CBAJ_T0035068.1 MGP_CBAJ_G0019664.1 mouse_genomes_project 12 91674239 91675171 + Ylpm1 protein_coding retained_intron MGP_CBAJ_T0035069.1 MGP_CBAJ_G0019664.1 mouse_genomes_project 12 91684509 91695327 + Ylpm1 protein_coding retained_intron MGP_CBAJ_T0035070.1 MGP_CBAJ_G0019664.1 mouse_genomes_project 12 91689228 91695493 + Ylpm1 protein_coding retained_intron MGP_CBAJ_T0035711.1 MGP_CBAJ_G0019871.1 mouse_genomes_project 12 123384403 123391124 + MGP_CBAJ_P0035711 BC022687 protein_coding protein_coding MGP_CBAJ_T0035712.1 MGP_CBAJ_G0019871.1 mouse_genomes_project 12 123384403 123391665 + MGP_CBAJ_P0035712 BC022687 protein_coding protein_coding MGP_CBAJ_T0035429.1 MGP_CBAJ_G0019771.1 mouse_genomes_project 12 112660959 112671573 - MGP_CBAJ_P0035429 Serpina6 protein_coding protein_coding MGP_CBAJ_T0035430.1 MGP_CBAJ_G0019771.1 mouse_genomes_project 12 112668733 112671463 - MGP_CBAJ_P0035430 Serpina6 protein_coding protein_coding MGP_CBAJ_T0034340.1 MGP_CBAJ_G0019417.1 mouse_genomes_project 12 38438210 39321553 + MGP_CBAJ_P0034340 Dgkb protein_coding protein_coding MGP_CBAJ_T0034341.1 MGP_CBAJ_G0019417.1 mouse_genomes_project 12 38542285 39322390 + MGP_CBAJ_P0034341 Dgkb protein_coding unknown_likely_coding MGP_CBAJ_T0035481.1 MGP_CBAJ_G0019801.1 mouse_genomes_project 12 115185919 115187963 + MGP_CBAJ_P0035481 Bdkrb1 protein_coding protein_coding MGP_CBAJ_T0035482.1 MGP_CBAJ_G0019801.1 mouse_genomes_project 12 115185953 115187606 + MGP_CBAJ_P0035482 Bdkrb1 protein_coding protein_coding MGP_CBAJ_T0035483.1 MGP_CBAJ_G0019801.1 mouse_genomes_project 12 115186714 115188052 + MGP_CBAJ_P0035483 Bdkrb1 protein_coding protein_coding MGP_CBAJ_T0011194.1 MGP_CBAJ_G0009332.1 mouse_genomes_project 12 1591223 1591510 + Gm22343 misc_RNA misc_RNA MGP_CBAJ_T0000055.1 MGP_CBAJ_G0000043.1 mouse_genomes_project 12 124580576 124581036 - MGP_CBAJ_P0000055 Ighv5-12-4 IG_V_gene IG_V_gene MGP_CBAJ_T0009748.1 MGP_CBAJ_G0007886.1 mouse_genomes_project 12 119912477 119912561 + Mir654 miRNA miRNA MGP_CBAJ_T0034981.1 MGP_CBAJ_G0019640.1 mouse_genomes_project 12 90532561 90542506 + MGP_CBAJ_P0034981 Acot5 protein_coding protein_coding MGP_CBAJ_T0034982.1 MGP_CBAJ_G0019640.1 mouse_genomes_project 12 90532561 90542505 + MGP_CBAJ_P0034982 Acot5 protein_coding protein_coding MGP_CBAJ_T0003342.1 MGP_CBAJ_G0003071.1 mouse_genomes_project 12 98453966 98480974 + 5430427M07Rik antisense antisense MGP_CBAJ_T0012688.1 MGP_CBAJ_G0010800.1 mouse_genomes_project 12 118495862 118496620 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0035076.1 MGP_CBAJ_G0019668.1 mouse_genomes_project 12 91798723 91808288 - MGP_CBAJ_P0035076 Pgf protein_coding protein_coding MGP_CBAJ_T0035176.1 MGP_CBAJ_G0019699.1 mouse_genomes_project 12 94180166 94187420 + MGP_CBAJ_P0035176 Ahsa1 protein_coding protein_coding MGP_CBAJ_T0034421.1 MGP_CBAJ_G0019444.1 mouse_genomes_project 12 54185124 54210652 - MGP_CBAJ_P0034421 Dtd2 protein_coding protein_coding MGP_CBAJ_T0034422.1 MGP_CBAJ_G0019444.1 mouse_genomes_project 12 54197002 54210652 - MGP_CBAJ_P0034422 Dtd2 protein_coding protein_coding MGP_CBAJ_T0098753.1 MGP_CBAJ_G0037008.1 mouse_genomes_project 12 56641905 56642054 + Gm22220 snRNA snRNA MGP_CBAJ_T0034569.1 MGP_CBAJ_G0019500.1 mouse_genomes_project 12 73665003 73668179 - MGP_CBAJ_P0034569 Rpl36al protein_coding protein_coding MGP_CBAJ_T0034570.1 MGP_CBAJ_G0019500.1 mouse_genomes_project 12 73665010 73668206 - MGP_CBAJ_P0034570 Rpl36al protein_coding protein_coding MGP_CBAJ_T0034571.1 MGP_CBAJ_G0019500.1 mouse_genomes_project 12 73665013 73668276 - MGP_CBAJ_P0034571 Rpl36al protein_coding protein_coding MGP_CBAJ_T0099972.1 MGP_CBAJ_G0038227.1 mouse_genomes_project 12 11489476 11489611 - Gm24208 snoRNA snoRNA MGP_CBAJ_T0009772.1 MGP_CBAJ_G0007910.1 mouse_genomes_project 12 119933014 119933095 + Mir410 miRNA miRNA MGP_CBAJ_T0006331.1 MGP_CBAJ_G0005269.1 mouse_genomes_project 12 79502431 79514497 + lincRNA lincRNA MGP_CBAJ_T0006332.1 MGP_CBAJ_G0005269.1 mouse_genomes_project 12 79502439 79514511 + lincRNA lincRNA MGP_CBAJ_T0006333.1 MGP_CBAJ_G0005269.1 mouse_genomes_project 12 79506885 79514511 + lincRNA lincRNA MGP_CBAJ_T0006334.1 MGP_CBAJ_G0005270.1 mouse_genomes_project 12 81906280 81908887 - lincRNA lincRNA MGP_CBAJ_T0101032.1 MGP_CBAJ_G0039265.1 mouse_genomes_project 12 109728061 109731726 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101033.1 MGP_CBAJ_G0039265.1 mouse_genomes_project 12 109731554 109732206 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0000252.1 MGP_CBAJ_G0000197.1 mouse_genomes_project 12 126930515 126930809 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0035315.1 MGP_CBAJ_G0019735.1 mouse_genomes_project 12 109319724 109424494 + MGP_CBAJ_P0035315 9030617O03Rik protein_coding protein_coding MGP_CBAJ_T0035316.1 MGP_CBAJ_G0019735.1 mouse_genomes_project 12 109319745 109424238 + MGP_CBAJ_P0035316 9030617O03Rik protein_coding protein_coding MGP_CBAJ_T0035317.1 MGP_CBAJ_G0019735.1 mouse_genomes_project 12 109319753 109459055 + MGP_CBAJ_P0035317 9030617O03Rik protein_coding protein_coding MGP_CBAJ_T0035318.1 MGP_CBAJ_G0019735.1 mouse_genomes_project 12 109319762 109424238 + MGP_CBAJ_P0035318 9030617O03Rik protein_coding protein_coding MGP_CBAJ_T0035319.1 MGP_CBAJ_G0019735.1 mouse_genomes_project 12 109319803 109386352 + MGP_CBAJ_P0035319 9030617O03Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0035320.1 MGP_CBAJ_G0019735.1 mouse_genomes_project 12 109330038 109424232 + MGP_CBAJ_P0035320 9030617O03Rik protein_coding protein_coding MGP_CBAJ_T0035321.1 MGP_CBAJ_G0019735.1 mouse_genomes_project 12 109412445 109427274 + MGP_CBAJ_P0035321 9030617O03Rik protein_coding protein_coding MGP_CBAJ_T0035326.1 MGP_CBAJ_G0019735.1 mouse_genomes_project 12 109444649 109457565 + 9030617O03Rik protein_coding processed_transcript MGP_CBAJ_T0034505.1 MGP_CBAJ_G0019481.1 mouse_genomes_project 12 62183941 62191039 + MGP_CBAJ_P0034505 Pnn protein_coding protein_coding MGP_CBAJ_T0034088.1 MGP_CBAJ_G0019323.1 mouse_genomes_project 12 11249213 11255035 - MGP_CBAJ_P0034088 Mycn protein_coding protein_coding MGP_CBAJ_T0034089.1 MGP_CBAJ_G0019323.1 mouse_genomes_project 12 11249213 11253739 - MGP_CBAJ_P0034089 Mycn protein_coding protein_coding MGP_CBAJ_T0034090.1 MGP_CBAJ_G0019323.1 mouse_genomes_project 12 11254066 11254946 - Mycn protein_coding processed_transcript MGP_CBAJ_T0034762.1 MGP_CBAJ_G0019566.1 mouse_genomes_project 12 81662865 81727365 - MGP_CBAJ_P0034762 Tex21 protein_coding protein_coding MGP_CBAJ_T0034399.1 MGP_CBAJ_G0019433.1 mouse_genomes_project 12 51254028 51255662 + Foxg1 protein_coding processed_transcript MGP_CBAJ_T0034400.1 MGP_CBAJ_G0019433.1 mouse_genomes_project 12 51254168 51254969 + Foxg1 protein_coding processed_transcript MGP_CBAJ_T0034401.1 MGP_CBAJ_G0019433.1 mouse_genomes_project 12 51254251 51258153 + MGP_CBAJ_P0034401 Foxg1 protein_coding protein_coding MGP_CBAJ_T0034402.1 MGP_CBAJ_G0019433.1 mouse_genomes_project 12 51254375 51258159 + MGP_CBAJ_P0034402 Foxg1 protein_coding protein_coding MGP_CBAJ_T0034306.1 MGP_CBAJ_G0019398.1 mouse_genomes_project 12 34055437 34057584 + MGP_CBAJ_P0034306 Twist1 protein_coding protein_coding MGP_CBAJ_T0000081.1 MGP_CBAJ_G0000062.1 mouse_genomes_project 12 125086539 125086975 - MGP_CBAJ_P0000081 Ighv3-5 IG_V_gene IG_V_gene MGP_CBAJ_T0000082.1 MGP_CBAJ_G0000062.1 mouse_genomes_project 12 125086539 125086838 - MGP_CBAJ_P0000082 Ighv3-5 IG_V_gene IG_V_gene MGP_CBAJ_T0034710.1 MGP_CBAJ_G0019548.1 mouse_genomes_project 12 78329758 78336170 - MGP_CBAJ_P0034710 Trmt5 protein_coding protein_coding MGP_CBAJ_T0034853.1 MGP_CBAJ_G0019608.1 mouse_genomes_project 12 86856749 86916732 + MGP_CBAJ_P0034853 Susd6 protein_coding unknown_likely_coding MGP_CBAJ_T0098756.1 MGP_CBAJ_G0037011.1 mouse_genomes_project 12 57187778 57192083 + Gm22634 snRNA snRNA MGP_CBAJ_T0000027.1 MGP_CBAJ_G0000020.1 mouse_genomes_project 12 124205323 124205340 - MGP_CBAJ_P0000027 Ighd3-1 IG_D_gene IG_D_gene MGP_CBAJ_T0009761.1 MGP_CBAJ_G0007899.1 mouse_genomes_project 12 119924035 119924101 + Mir668 miRNA miRNA MGP_CBAJ_T0003333.1 MGP_CBAJ_G0003062.1 mouse_genomes_project 12 86703253 86710748 - Plekhd1os antisense antisense MGP_CBAJ_T0100003.1 MGP_CBAJ_G0038258.1 mouse_genomes_project 12 78168552 78168684 - Gm23910 snoRNA snoRNA MGP_CBAJ_T0099988.1 MGP_CBAJ_G0038243.1 mouse_genomes_project 12 46440726 46440857 + Gm24731 snoRNA snoRNA MGP_CBAJ_T0098751.1 MGP_CBAJ_G0037006.1 mouse_genomes_project 12 54849243 54849350 + Gm24859 snRNA snRNA MGP_CBAJ_T0009721.1 MGP_CBAJ_G0007859.1 mouse_genomes_project 12 119781985 119782127 + Mir434 miRNA miRNA MGP_CBAJ_T0000247.1 MGP_CBAJ_G0000192.1 mouse_genomes_project 12 126549583 126549880 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0035613.1 MGP_CBAJ_G0019837.1 mouse_genomes_project 12 121548297 121572067 - MGP_CBAJ_P0035613 4930595D18Rik protein_coding protein_coding MGP_CBAJ_T0012668.1 MGP_CBAJ_G0010780.1 mouse_genomes_project 12 93556471 93556930 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012680.1 MGP_CBAJ_G0010792.1 mouse_genomes_project 12 112655752 112656410 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006354.1 MGP_CBAJ_G0005288.1 mouse_genomes_project 12 107534927 107536334 + Gm28933 lincRNA lincRNA MGP_CBAJ_T0034907.1 MGP_CBAJ_G0019624.1 mouse_genomes_project 12 88695867 88696986 - MGP_CBAJ_P0034907 Gm5435 protein_coding protein_coding MGP_CBAJ_T0034265.1 MGP_CBAJ_G0019387.1 mouse_genomes_project 12 31830243 31860742 - MGP_CBAJ_P0034265 Hbp1 protein_coding protein_coding MGP_CBAJ_T0034266.1 MGP_CBAJ_G0019387.1 mouse_genomes_project 12 31832423 31860526 - MGP_CBAJ_P0034266 Hbp1 protein_coding unknown_likely_coding MGP_CBAJ_T0034267.1 MGP_CBAJ_G0019387.1 mouse_genomes_project 12 31833369 31860430 - MGP_CBAJ_P0034267 Hbp1 protein_coding protein_coding MGP_CBAJ_T0034268.1 MGP_CBAJ_G0019387.1 mouse_genomes_project 12 31837982 31850648 - MGP_CBAJ_P0034268 Hbp1 protein_coding protein_coding MGP_CBAJ_T0034269.1 MGP_CBAJ_G0019387.1 mouse_genomes_project 12 31838093 31841973 - Hbp1 protein_coding retained_intron MGP_CBAJ_T0034270.1 MGP_CBAJ_G0019387.1 mouse_genomes_project 12 31840002 31859815 - MGP_CBAJ_P0034270 Hbp1 protein_coding protein_coding MGP_CBAJ_T0034271.1 MGP_CBAJ_G0019387.1 mouse_genomes_project 12 31841511 31860377 - MGP_CBAJ_P0034271 Hbp1 protein_coding protein_coding MGP_CBAJ_T0034272.1 MGP_CBAJ_G0019387.1 mouse_genomes_project 12 31843629 31860428 - MGP_CBAJ_P0034272 Hbp1 protein_coding protein_coding MGP_CBAJ_T0034273.1 MGP_CBAJ_G0019387.1 mouse_genomes_project 12 31844215 31860417 - MGP_CBAJ_P0034273 Hbp1 protein_coding protein_coding MGP_CBAJ_T0034274.1 MGP_CBAJ_G0019387.1 mouse_genomes_project 12 31849991 31860441 - Hbp1 protein_coding retained_intron MGP_CBAJ_T0035145.1 MGP_CBAJ_G0019689.1 mouse_genomes_project 12 93834237 93852884 + MGP_CBAJ_P0035145 Cipc protein_coding protein_coding MGP_CBAJ_T0035146.1 MGP_CBAJ_G0019689.1 mouse_genomes_project 12 93834237 93854024 + MGP_CBAJ_P0035146 Cipc protein_coding nonsense_mediated_decay MGP_CBAJ_T0035147.1 MGP_CBAJ_G0019689.1 mouse_genomes_project 12 93834293 93852184 + MGP_CBAJ_P0035147 Cipc protein_coding nonsense_mediated_decay MGP_CBAJ_T0035148.1 MGP_CBAJ_G0019689.1 mouse_genomes_project 12 93834537 93855579 + MGP_CBAJ_P0035148 Cipc protein_coding protein_coding MGP_CBAJ_T0035149.1 MGP_CBAJ_G0019689.1 mouse_genomes_project 12 93834590 93840360 + Cipc protein_coding retained_intron MGP_CBAJ_T0035150.1 MGP_CBAJ_G0019689.1 mouse_genomes_project 12 93834612 93850608 + MGP_CBAJ_P0035150 Cipc protein_coding nonsense_mediated_decay MGP_CBAJ_T0035151.1 MGP_CBAJ_G0019689.1 mouse_genomes_project 12 93834648 93850607 + MGP_CBAJ_P0035151 Cipc protein_coding nonsense_mediated_decay MGP_CBAJ_T0035152.1 MGP_CBAJ_G0019689.1 mouse_genomes_project 12 93834660 93850524 + MGP_CBAJ_P0035152 Cipc protein_coding protein_coding MGP_CBAJ_T0035153.1 MGP_CBAJ_G0019689.1 mouse_genomes_project 12 93834684 93852100 + MGP_CBAJ_P0035153 Cipc protein_coding nonsense_mediated_decay MGP_CBAJ_T0035154.1 MGP_CBAJ_G0019689.1 mouse_genomes_project 12 93839851 93853050 + MGP_CBAJ_P0035154 Cipc protein_coding protein_coding MGP_CBAJ_T0011206.1 MGP_CBAJ_G0009344.1 mouse_genomes_project 12 82232376 82232658 + Gm24010 misc_RNA misc_RNA MGP_CBAJ_T0035574.1 MGP_CBAJ_G0019827.1 mouse_genomes_project 12 120898982 120976646 + MGP_CBAJ_P0035574 Dync1h1 protein_coding protein_coding MGP_CBAJ_T0035575.1 MGP_CBAJ_G0019827.1 mouse_genomes_project 12 120942985 120943998 + Dync1h1 protein_coding retained_intron MGP_CBAJ_T0035576.1 MGP_CBAJ_G0019827.1 mouse_genomes_project 12 120961107 120965104 + MGP_CBAJ_P0035576 Dync1h1 protein_coding protein_coding MGP_CBAJ_T0035577.1 MGP_CBAJ_G0019827.1 mouse_genomes_project 12 120963339 120964278 + Dync1h1 protein_coding retained_intron MGP_CBAJ_T0035578.1 MGP_CBAJ_G0019827.1 mouse_genomes_project 12 120966028 120969661 + Dync1h1 protein_coding retained_intron MGP_CBAJ_T0035579.1 MGP_CBAJ_G0019827.1 mouse_genomes_project 12 120970345 120971155 + Dync1h1 protein_coding retained_intron MGP_CBAJ_T0035580.1 MGP_CBAJ_G0019827.1 mouse_genomes_project 12 120970618 120971186 + Dync1h1 protein_coding retained_intron MGP_CBAJ_T0035581.1 MGP_CBAJ_G0019827.1 mouse_genomes_project 12 120972873 120974561 + Dync1h1 protein_coding retained_intron MGP_CBAJ_T0034385.1 MGP_CBAJ_G0019428.1 mouse_genomes_project 12 45507128 45511300 - MGP_CBAJ_P0034385 Dnajb9 protein_coding protein_coding MGP_CBAJ_T0035614.1 MGP_CBAJ_G0019838.1 mouse_genomes_project 12 121555425 121626617 + MGP_CBAJ_P0035614 Traf3 protein_coding protein_coding MGP_CBAJ_T0035615.1 MGP_CBAJ_G0019838.1 mouse_genomes_project 12 121607350 121654338 + MGP_CBAJ_P0035615 Traf3 protein_coding protein_coding MGP_CBAJ_T0035616.1 MGP_CBAJ_G0019838.1 mouse_genomes_project 12 121607350 121654334 + MGP_CBAJ_P0035616 Traf3 protein_coding protein_coding MGP_CBAJ_T0035617.1 MGP_CBAJ_G0019838.1 mouse_genomes_project 12 121625101 121654343 + MGP_CBAJ_P0035617 Traf3 protein_coding protein_coding MGP_CBAJ_T0035618.1 MGP_CBAJ_G0019838.1 mouse_genomes_project 12 121635894 121649750 + Traf3 protein_coding retained_intron MGP_CBAJ_T0006339.1 MGP_CBAJ_G0005273.1 mouse_genomes_project 12 86062469 86074789 - 2310015A10Rik lincRNA lincRNA MGP_CBAJ_T0006341.1 MGP_CBAJ_G0005275.1 mouse_genomes_project 12 86780659 86783521 + Gm26796 lincRNA lincRNA MGP_CBAJ_T0034598.1 MGP_CBAJ_G0019514.1 mouse_genomes_project 12 74332522 74378569 - MGP_CBAJ_P0034598 Cdkl1 protein_coding unknown_likely_coding MGP_CBAJ_T0003338.1 MGP_CBAJ_G0003067.1 mouse_genomes_project 12 89349785 89398316 - Gm29530 antisense antisense MGP_CBAJ_T0034235.1 MGP_CBAJ_G0019377.1 mouse_genomes_project 12 31072652 31076217 + Lamb1 protein_coding retained_intron MGP_CBAJ_T0034236.1 MGP_CBAJ_G0019377.1 mouse_genomes_project 12 31072655 31074151 + MGP_CBAJ_P0034236 Lamb1 protein_coding protein_coding MGP_CBAJ_T0034237.1 MGP_CBAJ_G0019377.1 mouse_genomes_project 12 31072758 31138534 + MGP_CBAJ_P0034237 Lamb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034238.1 MGP_CBAJ_G0019377.1 mouse_genomes_project 12 31072779 31138603 + MGP_CBAJ_P0034238 Lamb1 protein_coding protein_coding MGP_CBAJ_T0034239.1 MGP_CBAJ_G0019377.1 mouse_genomes_project 12 31083992 31095359 + Lamb1 protein_coding retained_intron MGP_CBAJ_T0034240.1 MGP_CBAJ_G0019377.1 mouse_genomes_project 12 31085511 31086276 + Lamb1 protein_coding retained_intron MGP_CBAJ_T0034241.1 MGP_CBAJ_G0019377.1 mouse_genomes_project 12 31130905 31131839 + Lamb1 protein_coding retained_intron MGP_CBAJ_T0003332.1 MGP_CBAJ_G0003061.1 mouse_genomes_project 12 85884734 85885039 + Gm28056 antisense antisense MGP_CBAJ_T0035034.1 MGP_CBAJ_G0019652.1 mouse_genomes_project 12 90973774 90995533 - MGP_CBAJ_P0035034 Aldh6a1 protein_coding protein_coding MGP_CBAJ_T0035639.1 MGP_CBAJ_G0019847.1 mouse_genomes_project 12 122084222 122087205 - MGP_CBAJ_P0035639 Ckb protein_coding protein_coding MGP_CBAJ_T0035731.1 MGP_CBAJ_G0019882.1 mouse_genomes_project 12 123749678 123754934 + MGP_CBAJ_P0035731 Crip2 protein_coding protein_coding MGP_CBAJ_T0035732.1 MGP_CBAJ_G0019882.1 mouse_genomes_project 12 123750014 123754531 + MGP_CBAJ_P0035732 Crip2 protein_coding protein_coding MGP_CBAJ_T0035733.1 MGP_CBAJ_G0019882.1 mouse_genomes_project 12 123752250 123754558 + MGP_CBAJ_P0035733 Crip2 protein_coding protein_coding MGP_CBAJ_T0035734.1 MGP_CBAJ_G0019882.1 mouse_genomes_project 12 123752775 123754397 + Crip2 protein_coding retained_intron MGP_CBAJ_T0035735.1 MGP_CBAJ_G0019882.1 mouse_genomes_project 12 123752904 123753659 + Crip2 protein_coding retained_intron MGP_CBAJ_T0035736.1 MGP_CBAJ_G0019882.1 mouse_genomes_project 12 123753513 123754132 + Crip2 protein_coding retained_intron MGP_CBAJ_T0009730.1 MGP_CBAJ_G0007868.1 mouse_genomes_project 12 119898336 119898402 + Mir379 miRNA miRNA MGP_CBAJ_T0097928.1 MGP_CBAJ_G0036201.1 mouse_genomes_project 12 73042286 73042404 + n-R5s61 rRNA rRNA MGP_CBAJ_T0035791.1 MGP_CBAJ_G0019902.1 mouse_genomes_project 12 131835202 131945112 + MGP_CBAJ_P0035791 Tmem196 protein_coding protein_coding MGP_CBAJ_T0035792.1 MGP_CBAJ_G0019902.1 mouse_genomes_project 12 131835654 131944687 + MGP_CBAJ_P0035792 Tmem196 protein_coding protein_coding MGP_CBAJ_T0035793.1 MGP_CBAJ_G0019902.1 mouse_genomes_project 12 131835668 131940759 + MGP_CBAJ_P0035793 Tmem196 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035794.1 MGP_CBAJ_G0019902.1 mouse_genomes_project 12 131835802 131944580 + MGP_CBAJ_P0035794 Tmem196 protein_coding protein_coding MGP_CBAJ_T0035795.1 MGP_CBAJ_G0019902.1 mouse_genomes_project 12 131835814 131944928 + MGP_CBAJ_P0035795 Tmem196 protein_coding protein_coding MGP_CBAJ_T0035275.1 MGP_CBAJ_G0019723.1 mouse_genomes_project 12 107032845 107078933 + MGP_CBAJ_P0035275 Zc3h14 protein_coding protein_coding MGP_CBAJ_T0035301.1 MGP_CBAJ_G0019729.1 mouse_genomes_project 12 108421858 108522340 + MGP_CBAJ_P0035301 Kcnk13 protein_coding protein_coding MGP_CBAJ_T0035302.1 MGP_CBAJ_G0019729.1 mouse_genomes_project 12 108421858 108522340 + MGP_CBAJ_P0035302 Kcnk13 protein_coding protein_coding MGP_CBAJ_T0035303.1 MGP_CBAJ_G0019729.1 mouse_genomes_project 12 108421864 108423640 + MGP_CBAJ_P0035303 Kcnk13 protein_coding protein_coding MGP_CBAJ_T0035304.1 MGP_CBAJ_G0019729.1 mouse_genomes_project 12 108421884 108522332 + MGP_CBAJ_P0035304 Kcnk13 protein_coding protein_coding MGP_CBAJ_T0000118.1 MGP_CBAJ_G0000088.1 mouse_genomes_project 12 126712986 126713443 - MGP_CBAJ_P0000118 IG_V_gene IG_V_gene MGP_CBAJ_T0009664.1 MGP_CBAJ_G0007802.1 mouse_genomes_project 12 25707150 25707260 - Mir6538 miRNA miRNA MGP_CBAJ_T0098770.1 MGP_CBAJ_G0037025.1 mouse_genomes_project 12 81928040 81928114 - Gm25563 snRNA snRNA MGP_CBAJ_T0098782.1 MGP_CBAJ_G0037037.1 mouse_genomes_project 12 109864820 109864914 - Gm22749 snRNA snRNA MGP_CBAJ_T0098776.1 MGP_CBAJ_G0037031.1 mouse_genomes_project 12 86958790 86958897 + Gm23298 snRNA snRNA MGP_CBAJ_T0009672.1 MGP_CBAJ_G0007810.1 mouse_genomes_project 12 41152976 41153076 - Mir1938 miRNA miRNA MGP_CBAJ_T0000061.1 MGP_CBAJ_G0000047.1 mouse_genomes_project 12 124690827 124691339 - MGP_CBAJ_P0000061 Ighv5-17 IG_V_gene IG_V_gene MGP_CBAJ_T0012633.1 MGP_CBAJ_G0010745.1 mouse_genomes_project 12 6572104 6574485 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0034305.1 MGP_CBAJ_G0019397.1 mouse_genomes_project 12 34022182 34023068 + MGP_CBAJ_P0034305 Ferd3l protein_coding protein_coding MGP_CBAJ_T0006314.1 MGP_CBAJ_G0005256.1 mouse_genomes_project 12 31334252 31334930 - Gm29541 lincRNA lincRNA MGP_CBAJ_T0011208.1 MGP_CBAJ_G0009346.1 mouse_genomes_project 12 93669061 93669363 + Gm25888 misc_RNA misc_RNA MGP_CBAJ_T0035100.1 MGP_CBAJ_G0019677.1 mouse_genomes_project 12 92370828 92393940 + MGP_CBAJ_P0035100 Batf protein_coding protein_coding MGP_CBAJ_T0035071.1 MGP_CBAJ_G0019665.1 mouse_genomes_project 12 91711533 91722635 - MGP_CBAJ_P0035071 Prox2 protein_coding protein_coding MGP_CBAJ_T0035072.1 MGP_CBAJ_G0019665.1 mouse_genomes_project 12 91711962 91731985 - MGP_CBAJ_P0035072 Prox2 protein_coding protein_coding MGP_CBAJ_T0035073.1 MGP_CBAJ_G0019665.1 mouse_genomes_project 12 91719576 91721169 - Prox2 protein_coding retained_intron MGP_CBAJ_T0035092.1 MGP_CBAJ_G0019674.1 mouse_genomes_project 12 91980785 92022355 - MGP_CBAJ_P0035092 Tmed10 protein_coding unknown_likely_coding MGP_CBAJ_T0006299.1 MGP_CBAJ_G0005244.1 mouse_genomes_project 12 6547602 6553864 - Gm4755 lincRNA lincRNA MGP_CBAJ_T0035787.1 MGP_CBAJ_G0019900.1 mouse_genomes_project 12 130936754 131020378 - MGP_CBAJ_P0035787 Itgb8 protein_coding protein_coding MGP_CBAJ_T0035788.1 MGP_CBAJ_G0019900.1 mouse_genomes_project 12 130968317 131020377 - Itgb8 protein_coding retained_intron MGP_CBAJ_T0035789.1 MGP_CBAJ_G0019900.1 mouse_genomes_project 12 130983138 131020346 - Itgb8 protein_coding retained_intron MGP_CBAJ_T0012675.1 MGP_CBAJ_G0010787.1 mouse_genomes_project 12 109409245 109409716 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009762.1 MGP_CBAJ_G0007900.1 mouse_genomes_project 12 119924205 119924278 + Mir485 miRNA miRNA MGP_CBAJ_T0003307.1 MGP_CBAJ_G0003043.1 mouse_genomes_project 12 414391 443700 - 1110002L01Rik antisense antisense MGP_CBAJ_T0003308.1 MGP_CBAJ_G0003043.1 mouse_genomes_project 12 419833 443429 - 1110002L01Rik antisense antisense MGP_CBAJ_T0003309.1 MGP_CBAJ_G0003043.1 mouse_genomes_project 12 421239 443403 - 1110002L01Rik antisense antisense MGP_CBAJ_T0003310.1 MGP_CBAJ_G0003043.1 mouse_genomes_project 12 421865 443436 - 1110002L01Rik antisense antisense MGP_CBAJ_T0035488.1 MGP_CBAJ_G0019805.1 mouse_genomes_project 12 115415071 115471367 + MGP_CBAJ_P0035488 Papola protein_coding protein_coding MGP_CBAJ_T0035489.1 MGP_CBAJ_G0019805.1 mouse_genomes_project 12 115415081 115467453 + MGP_CBAJ_P0035489 Papola protein_coding protein_coding MGP_CBAJ_T0035490.1 MGP_CBAJ_G0019805.1 mouse_genomes_project 12 115415081 115471499 + MGP_CBAJ_P0035490 Papola protein_coding nonsense_mediated_decay MGP_CBAJ_T0035491.1 MGP_CBAJ_G0019805.1 mouse_genomes_project 12 115415088 115441990 + Papola protein_coding processed_transcript MGP_CBAJ_T0035492.1 MGP_CBAJ_G0019805.1 mouse_genomes_project 12 115415093 115469691 + MGP_CBAJ_P0035492 Papola protein_coding protein_coding MGP_CBAJ_T0035493.1 MGP_CBAJ_G0019805.1 mouse_genomes_project 12 115415110 115446512 + Papola protein_coding retained_intron MGP_CBAJ_T0035494.1 MGP_CBAJ_G0019805.1 mouse_genomes_project 12 115415115 115469418 + MGP_CBAJ_P0035494 Papola protein_coding nonsense_mediated_decay MGP_CBAJ_T0035495.1 MGP_CBAJ_G0019805.1 mouse_genomes_project 12 115415117 115442152 + Papola protein_coding processed_transcript MGP_CBAJ_T0035496.1 MGP_CBAJ_G0019805.1 mouse_genomes_project 12 115415120 115471504 + MGP_CBAJ_P0035496 Papola protein_coding nonsense_mediated_decay MGP_CBAJ_T0035497.1 MGP_CBAJ_G0019805.1 mouse_genomes_project 12 115415122 115437341 + MGP_CBAJ_P0035497 Papola protein_coding nonsense_mediated_decay MGP_CBAJ_T0035498.1 MGP_CBAJ_G0019805.1 mouse_genomes_project 12 115415249 115469833 + MGP_CBAJ_P0035498 Papola protein_coding protein_coding MGP_CBAJ_T0035499.1 MGP_CBAJ_G0019805.1 mouse_genomes_project 12 115415284 115442151 + MGP_CBAJ_P0035499 Papola protein_coding protein_coding MGP_CBAJ_T0035500.1 MGP_CBAJ_G0019805.1 mouse_genomes_project 12 115430279 115443855 + Papola protein_coding retained_intron MGP_CBAJ_T0035501.1 MGP_CBAJ_G0019805.1 mouse_genomes_project 12 115441056 115452892 + MGP_CBAJ_P0035501 Papola protein_coding nonsense_mediated_decay MGP_CBAJ_T0035502.1 MGP_CBAJ_G0019805.1 mouse_genomes_project 12 115441766 115442152 + Papola protein_coding retained_intron MGP_CBAJ_T0035503.1 MGP_CBAJ_G0019805.1 mouse_genomes_project 12 115444742 115469670 + MGP_CBAJ_P0035503 Papola protein_coding protein_coding MGP_CBAJ_T0035504.1 MGP_CBAJ_G0019805.1 mouse_genomes_project 12 115444793 115461775 + MGP_CBAJ_P0035504 Papola protein_coding protein_coding MGP_CBAJ_T0035505.1 MGP_CBAJ_G0019805.1 mouse_genomes_project 12 115450392 115451343 + Papola protein_coding retained_intron MGP_CBAJ_T0035506.1 MGP_CBAJ_G0019805.1 mouse_genomes_project 12 115461595 115468059 + MGP_CBAJ_P0035506 Papola protein_coding protein_coding MGP_CBAJ_T0034013.1 MGP_CBAJ_G0019293.1 mouse_genomes_project 12 2082187 2091999 + MGP_CBAJ_P0034013 Sf3b6 protein_coding protein_coding MGP_CBAJ_T0034448.1 MGP_CBAJ_G0019456.1 mouse_genomes_project 12 57521815 57522187 - MGP_CBAJ_P0034448 Gm20403 protein_coding protein_coding MGP_CBAJ_T0006312.1 MGP_CBAJ_G0005254.1 mouse_genomes_project 12 30136803 30196568 - 2310016D03Rik lincRNA lincRNA MGP_CBAJ_T0033982.1 MGP_CBAJ_G0019279.1 mouse_genomes_project 12 1029822 1030219 + MGP_CBAJ_P0033982 Gm17728 protein_coding protein_coding MGP_CBAJ_T0098186.1 MGP_CBAJ_G0036459.1 mouse_genomes_project 12 31762371 31762506 + Gm25913 scaRNA scaRNA MGP_CBAJ_T0034774.1 MGP_CBAJ_G0019571.1 mouse_genomes_project 12 81909408 81912167 + MGP_CBAJ_P0034774 Hspa2 protein_coding protein_coding MGP_CBAJ_T0035305.1 MGP_CBAJ_G0019730.1 mouse_genomes_project 12 108594590 108611190 + MGP_CBAJ_P0035305 Psmc1 protein_coding protein_coding MGP_CBAJ_T0000311.1 MGP_CBAJ_G0000256.1 mouse_genomes_project 12 62415575 62415644 + mt-Ti Mt_tRNA Mt_tRNA MGP_CBAJ_T0099979.1 MGP_CBAJ_G0038234.1 mouse_genomes_project 12 30852842 30852975 + Gm25408 snoRNA snoRNA MGP_CBAJ_T0100036.1 MGP_CBAJ_G0038291.1 mouse_genomes_project 12 119876295 119876367 + Gm25854 snoRNA snoRNA MGP_CBAJ_T0035409.1 MGP_CBAJ_G0019765.1 mouse_genomes_project 12 112380557 112398362 - MGP_CBAJ_P0035409 Ddx24 protein_coding protein_coding MGP_CBAJ_T0035410.1 MGP_CBAJ_G0019765.1 mouse_genomes_project 12 112380557 112398449 - MGP_CBAJ_P0035410 Ddx24 protein_coding protein_coding MGP_CBAJ_T0000117.1 MGP_CBAJ_G0000087.1 mouse_genomes_project 12 126533255 126533345 - MGP_CBAJ_P0000117 IG_V_gene IG_V_gene MGP_CBAJ_T0034651.1 MGP_CBAJ_G0019529.1 mouse_genomes_project 12 75895893 75909404 - MGP_CBAJ_P0034651 Timm9 protein_coding protein_coding MGP_CBAJ_T0034652.1 MGP_CBAJ_G0019529.1 mouse_genomes_project 12 75895893 75909404 - MGP_CBAJ_P0034652 Timm9 protein_coding protein_coding MGP_CBAJ_T0009668.1 MGP_CBAJ_G0007806.1 mouse_genomes_project 12 33080315 33080472 + Gm22904 miRNA miRNA MGP_CBAJ_T0000823.1 MGP_CBAJ_G0000759.1 mouse_genomes_project 12 59405522 59406386 - TEC TEC MGP_CBAJ_T0099984.1 MGP_CBAJ_G0038239.1 mouse_genomes_project 12 40272049 40272176 + Gm24069 snoRNA snoRNA MGP_CBAJ_T0034837.1 MGP_CBAJ_G0019599.1 mouse_genomes_project 12 86045904 86055056 - MGP_CBAJ_P0034837 Zfp36l1 protein_coding protein_coding MGP_CBAJ_T0034838.1 MGP_CBAJ_G0019599.1 mouse_genomes_project 12 86046441 86055041 - MGP_CBAJ_P0034838 Zfp36l1 protein_coding protein_coding MGP_CBAJ_T0009666.1 MGP_CBAJ_G0007804.1 mouse_genomes_project 12 30186995 30187099 - Gm25865 miRNA miRNA MGP_CBAJ_T0035044.1 MGP_CBAJ_G0019659.1 mouse_genomes_project 12 91365668 91367488 + MGP_CBAJ_P0035044 Isca2 protein_coding protein_coding MGP_CBAJ_T0000221.1 MGP_CBAJ_G0000166.1 mouse_genomes_project 12 124601132 124601567 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0100016.1 MGP_CBAJ_G0038271.1 mouse_genomes_project 12 119818374 119818449 + Gm24564 snoRNA snoRNA MGP_CBAJ_T0000231.1 MGP_CBAJ_G0000176.1 mouse_genomes_project 12 125091499 125091793 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0034111.1 MGP_CBAJ_G0019331.1 mouse_genomes_project 12 15492467 15509363 + MGP_CBAJ_P0034111 E2f6 protein_coding protein_coding MGP_CBAJ_T0034112.1 MGP_CBAJ_G0019331.1 mouse_genomes_project 12 15495441 15506877 + MGP_CBAJ_P0034112 E2f6 protein_coding unknown_likely_coding MGP_CBAJ_T0012696.1 MGP_CBAJ_G0010808.1 mouse_genomes_project 12 126888961 126889953 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006318.1 MGP_CBAJ_G0005259.1 mouse_genomes_project 12 33135372 33164142 + Gm16267 lincRNA lincRNA MGP_CBAJ_T0035399.1 MGP_CBAJ_G0019762.1 mouse_genomes_project 12 112284255 112322992 - MGP_CBAJ_P0035399 Asb2 protein_coding protein_coding MGP_CBAJ_T0035400.1 MGP_CBAJ_G0019762.1 mouse_genomes_project 12 112284259 112298705 - Asb2 protein_coding retained_intron MGP_CBAJ_T0035401.1 MGP_CBAJ_G0019762.1 mouse_genomes_project 12 112284259 112301494 - MGP_CBAJ_P0035401 Asb2 protein_coding protein_coding MGP_CBAJ_T0035402.1 MGP_CBAJ_G0019762.1 mouse_genomes_project 12 112297989 112299855 - Asb2 protein_coding processed_transcript MGP_CBAJ_T0034664.1 MGP_CBAJ_G0019535.1 mouse_genomes_project 12 76924129 76933387 + MGP_CBAJ_P0034664 Jkamp protein_coding protein_coding MGP_CBAJ_T0034665.1 MGP_CBAJ_G0019535.1 mouse_genomes_project 12 76924329 76932535 + Jkamp protein_coding processed_transcript MGP_CBAJ_T0034666.1 MGP_CBAJ_G0019535.1 mouse_genomes_project 12 76924397 76940663 + MGP_CBAJ_P0034666 Jkamp protein_coding protein_coding MGP_CBAJ_T0034667.1 MGP_CBAJ_G0019535.1 mouse_genomes_project 12 76924397 76941262 + MGP_CBAJ_P0034667 Jkamp protein_coding protein_coding MGP_CBAJ_T0034668.1 MGP_CBAJ_G0019535.1 mouse_genomes_project 12 76927683 76933387 + Jkamp protein_coding retained_intron MGP_CBAJ_T0034669.1 MGP_CBAJ_G0019535.1 mouse_genomes_project 12 76928224 76933261 + Jkamp protein_coding retained_intron MGP_CBAJ_T0034670.1 MGP_CBAJ_G0019535.1 mouse_genomes_project 12 76939597 76940658 + Jkamp protein_coding retained_intron MGP_CBAJ_T0006347.1 MGP_CBAJ_G0005281.1 mouse_genomes_project 12 92925052 92956739 + Gm805 lincRNA lincRNA MGP_CBAJ_T0009665.1 MGP_CBAJ_G0007803.1 mouse_genomes_project 12 28334626 28334691 + Mir6937 miRNA miRNA MGP_CBAJ_T0034628.1 MGP_CBAJ_G0019522.1 mouse_genomes_project 12 74908447 74916027 - MGP_CBAJ_P0034628 Trim9 protein_coding unknown_likely_coding MGP_CBAJ_T0034629.1 MGP_CBAJ_G0019522.1 mouse_genomes_project 12 74908453 75017992 - MGP_CBAJ_P0034629 Trim9 protein_coding protein_coding MGP_CBAJ_T0034630.1 MGP_CBAJ_G0019522.1 mouse_genomes_project 12 74908453 75017992 - MGP_CBAJ_P0034630 Trim9 protein_coding protein_coding MGP_CBAJ_T0034631.1 MGP_CBAJ_G0019522.1 mouse_genomes_project 12 74927686 75017992 - MGP_CBAJ_P0034631 Trim9 protein_coding protein_coding MGP_CBAJ_T0099993.1 MGP_CBAJ_G0038248.1 mouse_genomes_project 12 59346667 59346799 + Gm25760 snoRNA snoRNA MGP_CBAJ_T0017052.1 MGP_CBAJ_G0014975.1 mouse_genomes_project 12 107639085 107643098 - Gm20682 processed_transcript processed_transcript MGP_CBAJ_T0009770.1 MGP_CBAJ_G0007908.1 mouse_genomes_project 12 119932588 119932668 + Mir412 miRNA miRNA MGP_CBAJ_T0099974.1 MGP_CBAJ_G0038229.1 mouse_genomes_project 12 16341261 16341397 + Gm22748 snoRNA snoRNA MGP_CBAJ_T0012644.1 MGP_CBAJ_G0010756.1 mouse_genomes_project 12 57497620 57498758 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011216.1 MGP_CBAJ_G0009354.1 mouse_genomes_project 12 130481403 130481602 + Gm22537 misc_RNA misc_RNA MGP_CBAJ_T0035538.1 MGP_CBAJ_G0019816.1 mouse_genomes_project 12 118776218 118791917 - MGP_CBAJ_P0035538 Degs2 protein_coding protein_coding MGP_CBAJ_T0035539.1 MGP_CBAJ_G0019816.1 mouse_genomes_project 12 118779646 118791917 - MGP_CBAJ_P0035539 Degs2 protein_coding protein_coding MGP_CBAJ_T0034084.1 MGP_CBAJ_G0019320.1 mouse_genomes_project 12 9577750 9584604 + MGP_CBAJ_P0034084 Rad51ap2 protein_coding protein_coding MGP_CBAJ_T0034077.1 MGP_CBAJ_G0019314.1 mouse_genomes_project 12 8423919 8428668 + MGP_CBAJ_P0034077 Rdh14 protein_coding protein_coding MGP_CBAJ_T0006340.1 MGP_CBAJ_G0005274.1 mouse_genomes_project 12 86499634 86508600 - Gm26777 lincRNA lincRNA MGP_CBAJ_T0009767.1 MGP_CBAJ_G0007905.1 mouse_genomes_project 12 119931708 119931798 + Mir541 miRNA miRNA MGP_CBAJ_T0099973.1 MGP_CBAJ_G0038228.1 mouse_genomes_project 12 15631247 15631369 + Gm22303 snoRNA snoRNA MGP_CBAJ_T0034958.1 MGP_CBAJ_G0019631.1 mouse_genomes_project 12 90172693 90204037 + MGP_CBAJ_P0034958 Papln protein_coding protein_coding MGP_CBAJ_T0034959.1 MGP_CBAJ_G0019631.1 mouse_genomes_project 12 90172713 90204010 + MGP_CBAJ_P0034959 Papln protein_coding protein_coding MGP_CBAJ_T0034960.1 MGP_CBAJ_G0019631.1 mouse_genomes_project 12 90172721 90192787 + Papln protein_coding retained_intron MGP_CBAJ_T0000234.1 MGP_CBAJ_G0000179.1 mouse_genomes_project 12 125156081 125156371 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0035197.1 MGP_CBAJ_G0019703.1 mouse_genomes_project 12 94357584 94365894 + MGP_CBAJ_P0035197 Slirp protein_coding protein_coding MGP_CBAJ_T0035198.1 MGP_CBAJ_G0019703.1 mouse_genomes_project 12 94357600 94363608 + MGP_CBAJ_P0035198 Slirp protein_coding protein_coding MGP_CBAJ_T0035199.1 MGP_CBAJ_G0019703.1 mouse_genomes_project 12 94357624 94363592 + MGP_CBAJ_P0035199 Slirp protein_coding protein_coding MGP_CBAJ_T0035200.1 MGP_CBAJ_G0019703.1 mouse_genomes_project 12 94357634 94363612 + MGP_CBAJ_P0035200 Slirp protein_coding protein_coding MGP_CBAJ_T0003324.1 MGP_CBAJ_G0003055.1 mouse_genomes_project 12 60370809 60379690 - Gm16246 antisense antisense MGP_CBAJ_T0097920.1 MGP_CBAJ_G0036193.1 mouse_genomes_project 12 24926057 24926163 + Gm22527 rRNA rRNA MGP_CBAJ_T0000834.1 MGP_CBAJ_G0000770.1 mouse_genomes_project 12 113105661 113108113 - TEC TEC MGP_CBAJ_T0034039.1 MGP_CBAJ_G0019305.1 mouse_genomes_project 12 6290038 6300341 - MGP_CBAJ_P0034039 Slc7a15 protein_coding protein_coding MGP_CBAJ_T0034040.1 MGP_CBAJ_G0019305.1 mouse_genomes_project 12 6298996 6300362 - Slc7a15 protein_coding processed_transcript MGP_CBAJ_T0035156.1 MGP_CBAJ_G0019691.1 mouse_genomes_project 12 93922722 93998222 + MGP_CBAJ_P0035156 Tmem63c protein_coding nonsense_mediated_decay MGP_CBAJ_T0035157.1 MGP_CBAJ_G0019691.1 mouse_genomes_project 12 93929950 93998217 + MGP_CBAJ_P0035157 Tmem63c protein_coding protein_coding MGP_CBAJ_T0035158.1 MGP_CBAJ_G0019691.1 mouse_genomes_project 12 93930222 93998212 + MGP_CBAJ_P0035158 Tmem63c protein_coding protein_coding MGP_CBAJ_T0035159.1 MGP_CBAJ_G0019691.1 mouse_genomes_project 12 93930274 93964861 + MGP_CBAJ_P0035159 Tmem63c protein_coding protein_coding MGP_CBAJ_T0035160.1 MGP_CBAJ_G0019691.1 mouse_genomes_project 12 93944944 93998220 + MGP_CBAJ_P0035160 Tmem63c protein_coding protein_coding MGP_CBAJ_T0035167.1 MGP_CBAJ_G0019695.1 mouse_genomes_project 12 94078900 94112832 - MGP_CBAJ_P0035167 Tmed8 protein_coding protein_coding MGP_CBAJ_T0006335.1 MGP_CBAJ_G0005271.1 mouse_genomes_project 12 83882001 83896222 + lincRNA lincRNA MGP_CBAJ_T0006336.1 MGP_CBAJ_G0005271.1 mouse_genomes_project 12 83883490 83885873 + lincRNA lincRNA MGP_CBAJ_T0006337.1 MGP_CBAJ_G0005271.1 mouse_genomes_project 12 83885793 83896321 + lincRNA lincRNA MGP_CBAJ_T0035713.1 MGP_CBAJ_G0019872.1 mouse_genomes_project 12 123395678 123404774 - MGP_CBAJ_P0035713 Cdca4 protein_coding protein_coding MGP_CBAJ_T0000219.1 MGP_CBAJ_G0000164.1 mouse_genomes_project 12 124258798 124259267 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0006393.1 MGP_CBAJ_G0005313.1 mouse_genomes_project 12 119827620 119829629 + Gm26945 lincRNA lincRNA MGP_CBAJ_T0035173.1 MGP_CBAJ_G0019698.1 mouse_genomes_project 12 94152367 94179707 - MGP_CBAJ_P0035173 Vipas39 protein_coding protein_coding MGP_CBAJ_T0035174.1 MGP_CBAJ_G0019698.1 mouse_genomes_project 12 94152367 94177665 - MGP_CBAJ_P0035174 Vipas39 protein_coding protein_coding MGP_CBAJ_T0035175.1 MGP_CBAJ_G0019698.1 mouse_genomes_project 12 94152367 94179707 - MGP_CBAJ_P0035175 Vipas39 protein_coding protein_coding MGP_CBAJ_T0035036.1 MGP_CBAJ_G0019654.1 mouse_genomes_project 12 91137828 91169205 + MGP_CBAJ_P0035036 Vsx2 protein_coding protein_coding MGP_CBAJ_T0035037.1 MGP_CBAJ_G0019654.1 mouse_genomes_project 12 91137906 91169205 + MGP_CBAJ_P0035037 Vsx2 protein_coding protein_coding MGP_CBAJ_T0034549.1 MGP_CBAJ_G0019494.1 mouse_genomes_project 12 69079574 69126982 - Mis18bp1 protein_coding retained_intron MGP_CBAJ_T0034550.1 MGP_CBAJ_G0019494.1 mouse_genomes_project 12 69079574 69126958 - MGP_CBAJ_P0034550 Mis18bp1 protein_coding protein_coding MGP_CBAJ_T0034551.1 MGP_CBAJ_G0019494.1 mouse_genomes_project 12 69083165 69085561 - Mis18bp1 protein_coding retained_intron MGP_CBAJ_T0034552.1 MGP_CBAJ_G0019494.1 mouse_genomes_project 12 69104249 69106566 - Mis18bp1 protein_coding processed_transcript MGP_CBAJ_T0034553.1 MGP_CBAJ_G0019494.1 mouse_genomes_project 12 69106189 69126944 - Mis18bp1 protein_coding processed_transcript MGP_CBAJ_T0034554.1 MGP_CBAJ_G0019494.1 mouse_genomes_project 12 69107494 69126956 - Mis18bp1 protein_coding retained_intron MGP_CBAJ_T0099992.1 MGP_CBAJ_G0038247.1 mouse_genomes_project 12 59003749 59003879 - Gm25917 snoRNA snoRNA MGP_CBAJ_T0034740.1 MGP_CBAJ_G0019563.1 mouse_genomes_project 12 81113905 81138684 - MGP_CBAJ_P0034740 Sgpp1 protein_coding protein_coding MGP_CBAJ_T0100031.1 MGP_CBAJ_G0038286.1 mouse_genomes_project 12 119870447 119870522 + Gm23736 snoRNA snoRNA MGP_CBAJ_T0034711.1 MGP_CBAJ_G0019549.1 mouse_genomes_project 12 78336237 78413232 + MGP_CBAJ_P0034711 Slc38a6 protein_coding protein_coding MGP_CBAJ_T0034712.1 MGP_CBAJ_G0019549.1 mouse_genomes_project 12 78336248 78371172 + MGP_CBAJ_P0034712 Slc38a6 protein_coding protein_coding MGP_CBAJ_T0034713.1 MGP_CBAJ_G0019549.1 mouse_genomes_project 12 78336366 78371161 + MGP_CBAJ_P0034713 Slc38a6 protein_coding protein_coding MGP_CBAJ_T0034714.1 MGP_CBAJ_G0019549.1 mouse_genomes_project 12 78370784 78399413 + Slc38a6 protein_coding retained_intron MGP_CBAJ_T0034715.1 MGP_CBAJ_G0019549.1 mouse_genomes_project 12 78396366 78411761 + MGP_CBAJ_P0034715 Slc38a6 protein_coding unknown_likely_coding MGP_CBAJ_T0034716.1 MGP_CBAJ_G0019549.1 mouse_genomes_project 12 78403996 78411089 + Slc38a6 protein_coding retained_intron MGP_CBAJ_T0035619.1 MGP_CBAJ_G0019839.1 mouse_genomes_project 12 121658300 121663613 + MGP_CBAJ_P0035619 Amn protein_coding protein_coding MGP_CBAJ_T0034773.1 MGP_CBAJ_G0019570.1 mouse_genomes_project 12 81872991 81900474 + MGP_CBAJ_P0034773 Zbtb1 protein_coding protein_coding MGP_CBAJ_T0098485.1 MGP_CBAJ_G0036744.1 mouse_genomes_project 12 77924087 77945509 + Gm26709 sense_overlapping sense_overlapping MGP_CBAJ_T0035422.1 MGP_CBAJ_G0019769.1 mouse_genomes_project 12 112533278 112630709 + MGP_CBAJ_P0035422 Ppp4r4 protein_coding protein_coding MGP_CBAJ_T0035423.1 MGP_CBAJ_G0019769.1 mouse_genomes_project 12 112533565 112629782 + MGP_CBAJ_P0035423 Ppp4r4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035424.1 MGP_CBAJ_G0019769.1 mouse_genomes_project 12 112561698 112629944 + MGP_CBAJ_P0035424 Ppp4r4 protein_coding protein_coding MGP_CBAJ_T0035425.1 MGP_CBAJ_G0019769.1 mouse_genomes_project 12 112587850 112598052 + MGP_CBAJ_P0035425 Ppp4r4 protein_coding protein_coding MGP_CBAJ_T0035426.1 MGP_CBAJ_G0019769.1 mouse_genomes_project 12 112611738 112616485 + MGP_CBAJ_P0035426 Ppp4r4 protein_coding protein_coding MGP_CBAJ_T0035045.1 MGP_CBAJ_G0019660.1 mouse_genomes_project 12 91377707 91476992 - MGP_CBAJ_P0035045 Ltbp2 protein_coding protein_coding MGP_CBAJ_T0035046.1 MGP_CBAJ_G0019660.1 mouse_genomes_project 12 91377708 91476955 - MGP_CBAJ_P0035046 Ltbp2 protein_coding protein_coding MGP_CBAJ_T0035047.1 MGP_CBAJ_G0019660.1 mouse_genomes_project 12 91377824 91476939 - MGP_CBAJ_P0035047 Ltbp2 protein_coding protein_coding MGP_CBAJ_T0035048.1 MGP_CBAJ_G0019660.1 mouse_genomes_project 12 91379701 91386337 - MGP_CBAJ_P0035048 Ltbp2 protein_coding protein_coding MGP_CBAJ_T0035049.1 MGP_CBAJ_G0019660.1 mouse_genomes_project 12 91380874 91387465 - MGP_CBAJ_P0035049 Ltbp2 protein_coding protein_coding MGP_CBAJ_T0035050.1 MGP_CBAJ_G0019660.1 mouse_genomes_project 12 91386352 91393957 - MGP_CBAJ_P0035050 Ltbp2 protein_coding protein_coding MGP_CBAJ_T0035051.1 MGP_CBAJ_G0019660.1 mouse_genomes_project 12 91402206 91476951 - Ltbp2 protein_coding retained_intron MGP_CBAJ_T0009674.1 MGP_CBAJ_G0007812.1 mouse_genomes_project 12 57113766 57113846 - Mir1892 miRNA miRNA MGP_CBAJ_T0009733.1 MGP_CBAJ_G0007871.1 mouse_genomes_project 12 119899920 119899969 - Mir299b miRNA miRNA MGP_CBAJ_T0009781.1 MGP_CBAJ_G0007919.1 mouse_genomes_project 12 123509827 123509886 - Mir6941 miRNA miRNA MGP_CBAJ_T0009712.1 MGP_CBAJ_G0007850.1 mouse_genomes_project 12 119773387 119773484 + Mir337 miRNA miRNA MGP_CBAJ_T0000092.1 MGP_CBAJ_G0000069.1 mouse_genomes_project 12 125237528 125239604 - MGP_CBAJ_P0000092 IG_V_gene IG_V_gene MGP_CBAJ_T0009680.1 MGP_CBAJ_G0007818.1 mouse_genomes_project 12 74351423 74351533 - Mir681 miRNA miRNA MGP_CBAJ_T0009669.1 MGP_CBAJ_G0007807.1 mouse_genomes_project 12 35466399 35466486 - Mir680-3 miRNA miRNA MGP_CBAJ_T0000249.1 MGP_CBAJ_G0000194.1 mouse_genomes_project 12 126689787 126691736 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0000228.1 MGP_CBAJ_G0000173.1 mouse_genomes_project 12 124806144 124806443 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0009661.1 MGP_CBAJ_G0007799.1 mouse_genomes_project 12 13541682 13541792 - Gm27682 miRNA miRNA MGP_CBAJ_T0000836.1 MGP_CBAJ_G0000772.1 mouse_genomes_project 12 122871895 122874630 - TEC TEC MGP_CBAJ_T0099990.1 MGP_CBAJ_G0038245.1 mouse_genomes_project 12 51460979 51461107 - Gm25015 snoRNA snoRNA MGP_CBAJ_T0034242.1 MGP_CBAJ_G0019378.1 mouse_genomes_project 12 31140484 31168037 - MGP_CBAJ_P0034242 Dld protein_coding protein_coding MGP_CBAJ_T0100008.1 MGP_CBAJ_G0038263.1 mouse_genomes_project 12 89012477 89012613 - Gm22149 snoRNA snoRNA MGP_CBAJ_T0034737.1 MGP_CBAJ_G0019561.1 mouse_genomes_project 12 80815737 80981477 - MGP_CBAJ_P0034737 Ppp2r5e protein_coding protein_coding MGP_CBAJ_T0009697.1 MGP_CBAJ_G0007835.1 mouse_genomes_project 12 108441617 108441695 - Gm23291 miRNA miRNA MGP_CBAJ_T0035433.1 MGP_CBAJ_G0019773.1 mouse_genomes_project 12 112701192 112707805 - MGP_CBAJ_P0035433 Serpina1f protein_coding protein_coding MGP_CBAJ_T0035434.1 MGP_CBAJ_G0019773.1 mouse_genomes_project 12 112702782 112708672 - MGP_CBAJ_P0035434 Serpina1f protein_coding protein_coding MGP_CBAJ_T0035435.1 MGP_CBAJ_G0019773.1 mouse_genomes_project 12 112702785 112707855 - MGP_CBAJ_P0035435 Serpina1f protein_coding protein_coding MGP_CBAJ_T0034905.1 MGP_CBAJ_G0019623.1 mouse_genomes_project 12 88345585 88645232 + MGP_CBAJ_P0034905 Sipa1l1 protein_coding protein_coding MGP_CBAJ_T0034906.1 MGP_CBAJ_G0019623.1 mouse_genomes_project 12 88495324 88645232 + MGP_CBAJ_P0034906 Sipa1l1 protein_coding protein_coding MGP_CBAJ_T0035657.1 MGP_CBAJ_G0019852.1 mouse_genomes_project 12 122266340 122279879 - MGP_CBAJ_P0035657 Xrcc3 protein_coding protein_coding MGP_CBAJ_T0035658.1 MGP_CBAJ_G0019852.1 mouse_genomes_project 12 122266340 122278252 - MGP_CBAJ_P0035658 Xrcc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035659.1 MGP_CBAJ_G0019852.1 mouse_genomes_project 12 122267995 122278252 - Xrcc3 protein_coding processed_transcript MGP_CBAJ_T0035660.1 MGP_CBAJ_G0019852.1 mouse_genomes_project 12 122268061 122276090 - Xrcc3 protein_coding retained_intron MGP_CBAJ_T0035661.1 MGP_CBAJ_G0019852.1 mouse_genomes_project 12 122268156 122279911 - Xrcc3 protein_coding processed_transcript MGP_CBAJ_T0035663.1 MGP_CBAJ_G0019852.1 mouse_genomes_project 12 122275873 122278272 - Xrcc3 protein_coding processed_transcript MGP_CBAJ_T0035664.1 MGP_CBAJ_G0019852.1 mouse_genomes_project 12 122276008 122279890 - Xrcc3 protein_coding processed_transcript MGP_CBAJ_T0035665.1 MGP_CBAJ_G0019852.1 mouse_genomes_project 12 122277579 122278272 - Xrcc3 protein_coding processed_transcript MGP_CBAJ_T0006319.1 MGP_CBAJ_G0005260.1 mouse_genomes_project 12 37559379 37571985 - Gm29007 lincRNA lincRNA MGP_CBAJ_T0035373.1 MGP_CBAJ_G0019753.1 mouse_genomes_project 12 111640851 111642283 - MGP_CBAJ_P0035373 Moap1 protein_coding protein_coding MGP_CBAJ_T0035374.1 MGP_CBAJ_G0019753.1 mouse_genomes_project 12 111640851 111642267 - MGP_CBAJ_P0035374 Moap1 protein_coding protein_coding MGP_CBAJ_T0011210.1 MGP_CBAJ_G0009348.1 mouse_genomes_project 12 104238086 104238383 - Gm26480 misc_RNA misc_RNA MGP_CBAJ_T0034257.1 MGP_CBAJ_G0019383.1 mouse_genomes_project 12 31452516 31511880 - MGP_CBAJ_P0034257 Bcap29 protein_coding protein_coding MGP_CBAJ_T0034258.1 MGP_CBAJ_G0019383.1 mouse_genomes_project 12 31452516 31511819 - MGP_CBAJ_P0034258 Bcap29 protein_coding protein_coding MGP_CBAJ_T0009681.1 MGP_CBAJ_G0007819.1 mouse_genomes_project 12 76974991 76975100 - Gm24466 miRNA miRNA MGP_CBAJ_T0009688.1 MGP_CBAJ_G0007826.1 mouse_genomes_project 12 91876382 91876445 - Mir6938 miRNA miRNA MGP_CBAJ_T0100033.1 MGP_CBAJ_G0038288.1 mouse_genomes_project 12 119872031 119872118 + Gm22981 snoRNA snoRNA MGP_CBAJ_T0003315.1 MGP_CBAJ_G0003048.1 mouse_genomes_project 12 33221664 33240529 - antisense antisense MGP_CBAJ_T0034826.1 MGP_CBAJ_G0019595.1 mouse_genomes_project 12 84997969 85017216 - MGP_CBAJ_P0034826 Rdh11 protein_coding protein_coding MGP_CBAJ_T0034827.1 MGP_CBAJ_G0019595.1 mouse_genomes_project 12 84999183 85015884 - MGP_CBAJ_P0034827 Rdh11 protein_coding protein_coding MGP_CBAJ_T0034828.1 MGP_CBAJ_G0019595.1 mouse_genomes_project 12 84999797 85016716 - MGP_CBAJ_P0034828 Rdh11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0000030.1 MGP_CBAJ_G0000023.1 mouse_genomes_project 12 124206836 124206846 - IG_D_pseudogene IG_D_pseudogene MGP_CBAJ_T0009766.1 MGP_CBAJ_G0007904.1 mouse_genomes_project 12 119929809 119929877 + Mir377 miRNA miRNA MGP_CBAJ_T0012674.1 MGP_CBAJ_G0010786.1 mouse_genomes_project 12 107590509 107590760 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101579.1 MGP_CBAJ_G0039610.1 mouse_genomes_project 12 112883888 112897221 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0000022.1 MGP_CBAJ_G0000016.1 mouse_genomes_project 12 123966068 123968235 + IG_C_pseudogene IG_C_pseudogene MGP_CBAJ_T0035107.1 MGP_CBAJ_G0019680.1 mouse_genomes_project 12 92549269 92586886 + MGP_CBAJ_P0035107 Ttll5 protein_coding protein_coding MGP_CBAJ_T0035108.1 MGP_CBAJ_G0019680.1 mouse_genomes_project 12 92549283 92623456 + MGP_CBAJ_P0035108 Ttll5 protein_coding protein_coding MGP_CBAJ_T0035109.1 MGP_CBAJ_G0019680.1 mouse_genomes_project 12 92549317 92613149 + MGP_CBAJ_P0035109 Ttll5 protein_coding protein_coding MGP_CBAJ_T0035110.1 MGP_CBAJ_G0019680.1 mouse_genomes_project 12 92549320 92792862 + MGP_CBAJ_P0035110 Ttll5 protein_coding protein_coding MGP_CBAJ_T0035111.1 MGP_CBAJ_G0019680.1 mouse_genomes_project 12 92549578 92752199 + MGP_CBAJ_P0035111 Ttll5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035112.1 MGP_CBAJ_G0019680.1 mouse_genomes_project 12 92549579 92792310 + MGP_CBAJ_P0035112 Ttll5 protein_coding protein_coding MGP_CBAJ_T0035113.1 MGP_CBAJ_G0019680.1 mouse_genomes_project 12 92549588 92598775 + Ttll5 protein_coding processed_transcript MGP_CBAJ_T0035114.1 MGP_CBAJ_G0019680.1 mouse_genomes_project 12 92549588 92792861 + MGP_CBAJ_P0035114 Ttll5 protein_coding protein_coding MGP_CBAJ_T0035115.1 MGP_CBAJ_G0019680.1 mouse_genomes_project 12 92549595 92568164 + MGP_CBAJ_P0035115 Ttll5 protein_coding protein_coding MGP_CBAJ_T0035116.1 MGP_CBAJ_G0019680.1 mouse_genomes_project 12 92549631 92570059 + Ttll5 protein_coding retained_intron MGP_CBAJ_T0035117.1 MGP_CBAJ_G0019680.1 mouse_genomes_project 12 92549631 92573694 + MGP_CBAJ_P0035117 Ttll5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035118.1 MGP_CBAJ_G0019680.1 mouse_genomes_project 12 92549685 92792861 + MGP_CBAJ_P0035118 Ttll5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035119.1 MGP_CBAJ_G0019680.1 mouse_genomes_project 12 92551094 92792311 + MGP_CBAJ_P0035119 Ttll5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035120.1 MGP_CBAJ_G0019680.1 mouse_genomes_project 12 92607696 92620910 + Ttll5 protein_coding retained_intron MGP_CBAJ_T0035121.1 MGP_CBAJ_G0019680.1 mouse_genomes_project 12 92641242 92661671 + MGP_CBAJ_P0035121 Ttll5 protein_coding protein_coding MGP_CBAJ_T0035122.1 MGP_CBAJ_G0019680.1 mouse_genomes_project 12 92646461 92792861 + MGP_CBAJ_P0035122 Ttll5 protein_coding protein_coding MGP_CBAJ_T0035123.1 MGP_CBAJ_G0019680.1 mouse_genomes_project 12 92654739 92748947 + MGP_CBAJ_P0035123 Ttll5 protein_coding protein_coding MGP_CBAJ_T0035124.1 MGP_CBAJ_G0019680.1 mouse_genomes_project 12 92664486 92792861 + MGP_CBAJ_P0035124 Ttll5 protein_coding protein_coding MGP_CBAJ_T0035125.1 MGP_CBAJ_G0019680.1 mouse_genomes_project 12 92671081 92802671 + MGP_CBAJ_P0035125 Ttll5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035126.1 MGP_CBAJ_G0019681.1 mouse_genomes_project 12 92795845 92819815 - MGP_CBAJ_P0035126 Tgfb3 protein_coding protein_coding MGP_CBAJ_T0000066.1 MGP_CBAJ_G0000051.1 mouse_genomes_project 12 124801980 124802411 - MGP_CBAJ_P0000066 Ighv3-1 IG_V_gene IG_V_gene MGP_CBAJ_T0035075.1 MGP_CBAJ_G0019667.1 mouse_genomes_project 12 91767244 91782935 - MGP_CBAJ_P0035075 Rps6kl1 protein_coding protein_coding MGP_CBAJ_T0098272.1 MGP_CBAJ_G0036542.1 mouse_genomes_project 12 59384464 59388402 + C87198 sense_intronic sense_intronic MGP_CBAJ_T0098273.1 MGP_CBAJ_G0036542.1 mouse_genomes_project 12 59384474 59387938 + C87198 sense_intronic sense_intronic MGP_CBAJ_T0034848.1 MGP_CBAJ_G0019606.1 mouse_genomes_project 12 86710872 86742423 + MGP_CBAJ_P0034848 Plekhd1 protein_coding protein_coding MGP_CBAJ_T0034849.1 MGP_CBAJ_G0019606.1 mouse_genomes_project 12 86725063 86738894 + Plekhd1 protein_coding processed_transcript MGP_CBAJ_T0034850.1 MGP_CBAJ_G0019606.1 mouse_genomes_project 12 86738966 86740216 + MGP_CBAJ_P0034850 Plekhd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034851.1 MGP_CBAJ_G0019606.1 mouse_genomes_project 12 86739940 86741119 + Plekhd1 protein_coding retained_intron MGP_CBAJ_T0034438.1 MGP_CBAJ_G0019453.1 mouse_genomes_project 12 57244016 57291416 - MGP_CBAJ_P0034438 Snx6 protein_coding protein_coding MGP_CBAJ_T0009683.1 MGP_CBAJ_G0007821.1 mouse_genomes_project 12 81340063 81340146 + Mir5101 miRNA miRNA MGP_CBAJ_T0034758.1 MGP_CBAJ_G0019565.1 mouse_genomes_project 12 81575816 81635896 - MGP_CBAJ_P0034758 Esr2 protein_coding protein_coding MGP_CBAJ_T0034759.1 MGP_CBAJ_G0019565.1 mouse_genomes_project 12 81575816 81626630 - MGP_CBAJ_P0034759 Esr2 protein_coding protein_coding MGP_CBAJ_T0034760.1 MGP_CBAJ_G0019565.1 mouse_genomes_project 12 81575816 81635896 - MGP_CBAJ_P0034760 Esr2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034761.1 MGP_CBAJ_G0019565.1 mouse_genomes_project 12 81575836 81635896 - MGP_CBAJ_P0034761 Esr2 protein_coding protein_coding MGP_CBAJ_T0034405.1 MGP_CBAJ_G0019436.1 mouse_genomes_project 12 52358886 52675578 - MGP_CBAJ_P0034405 Prkd1 protein_coding protein_coding MGP_CBAJ_T0034979.1 MGP_CBAJ_G0019639.1 mouse_genomes_project 12 90503907 90513806 + MGP_CBAJ_P0034979 Acot3 protein_coding protein_coding MGP_CBAJ_T0034980.1 MGP_CBAJ_G0019639.1 mouse_genomes_project 12 90503914 90513806 + MGP_CBAJ_P0034980 Acot3 protein_coding protein_coding MGP_CBAJ_T0009763.1 MGP_CBAJ_G0007901.1 mouse_genomes_project 12 119924922 119925004 + Mir453 miRNA miRNA MGP_CBAJ_T0034976.1 MGP_CBAJ_G0019637.1 mouse_genomes_project 12 90447796 90459176 + MGP_CBAJ_P0034976 Acot1 protein_coding protein_coding MGP_CBAJ_T0097932.1 MGP_CBAJ_G0036205.1 mouse_genomes_project 12 98192098 98192215 + n-R5s65 rRNA rRNA MGP_CBAJ_T0035509.1 MGP_CBAJ_G0019807.1 mouse_genomes_project 12 117390558 117391563 + MGP_CBAJ_P0035509 3110018I06Rik protein_coding protein_coding MGP_CBAJ_T0034936.1 MGP_CBAJ_G0019627.1 mouse_genomes_project 12 89899039 89926591 + MGP_CBAJ_P0034936 Dcaf4 protein_coding protein_coding MGP_CBAJ_T0034489.1 MGP_CBAJ_G0019475.1 mouse_genomes_project 12 60516355 60582079 + MGP_CBAJ_P0034489 protein_coding protein_coding MGP_CBAJ_T0034490.1 MGP_CBAJ_G0019475.1 mouse_genomes_project 12 60527990 60712319 + MGP_CBAJ_P0034490 protein_coding protein_coding MGP_CBAJ_T0034491.1 MGP_CBAJ_G0019475.1 mouse_genomes_project 12 60610524 60612829 + MGP_CBAJ_P0034491 protein_coding protein_coding MGP_CBAJ_T0100019.1 MGP_CBAJ_G0038274.1 mouse_genomes_project 12 119828301 119828374 + Gm24899 snoRNA snoRNA MGP_CBAJ_T0035459.1 MGP_CBAJ_G0019786.1 mouse_genomes_project 12 113711665 113723562 + MGP_CBAJ_P0035459 Serpina3n protein_coding protein_coding MGP_CBAJ_T0035460.1 MGP_CBAJ_G0019786.1 mouse_genomes_project 12 113711678 113723572 + MGP_CBAJ_P0035460 Serpina3n protein_coding unknown_likely_coding MGP_CBAJ_T0000233.1 MGP_CBAJ_G0000178.1 mouse_genomes_project 12 125148038 125148333 - IG_V_pseudogene IG_V_pseudogene MGP_CBAJ_T0012657.1 MGP_CBAJ_G0010769.1 mouse_genomes_project 12 79125759 79126065 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0034199.1 MGP_CBAJ_G0019363.1 mouse_genomes_project 12 28305771 28315355 + MGP_CBAJ_P0034199 Rnaseh1 protein_coding protein_coding MGP_CBAJ_T0035381.1 MGP_CBAJ_G0019759.1 mouse_genomes_project 12 111861768 112133669 + MGP_CBAJ_P0035381 Unc79 protein_coding protein_coding MGP_CBAJ_T0035382.1 MGP_CBAJ_G0019759.1 mouse_genomes_project 12 111862477 112133281 + MGP_CBAJ_P0035382 Unc79 protein_coding protein_coding MGP_CBAJ_T0035383.1 MGP_CBAJ_G0019759.1 mouse_genomes_project 12 111908192 112133281 + MGP_CBAJ_P0035383 Unc79 protein_coding unknown_likely_coding MGP_CBAJ_T0035384.1 MGP_CBAJ_G0019759.1 mouse_genomes_project 12 111920621 111925012 + Unc79 protein_coding retained_intron MGP_CBAJ_T0035385.1 MGP_CBAJ_G0019759.1 mouse_genomes_project 12 111921392 111987315 + MGP_CBAJ_P0035385 Unc79 protein_coding protein_coding MGP_CBAJ_T0035386.1 MGP_CBAJ_G0019759.1 mouse_genomes_project 12 111921443 112133666 + MGP_CBAJ_P0035386 Unc79 protein_coding protein_coding MGP_CBAJ_T0035387.1 MGP_CBAJ_G0019759.1 mouse_genomes_project 12 111921500 112133733 + MGP_CBAJ_P0035387 Unc79 protein_coding protein_coding MGP_CBAJ_T0035388.1 MGP_CBAJ_G0019759.1 mouse_genomes_project 12 111986965 112001226 + Unc79 protein_coding retained_intron MGP_CBAJ_T0035389.1 MGP_CBAJ_G0019759.1 mouse_genomes_project 12 112029121 112045305 + MGP_CBAJ_P0035389 Unc79 protein_coding protein_coding MGP_CBAJ_T0035390.1 MGP_CBAJ_G0019759.1 mouse_genomes_project 12 112071283 112085879 + MGP_CBAJ_P0035390 Unc79 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034121.1 MGP_CBAJ_G0019334.1 mouse_genomes_project 12 15703062 15714747 - MGP_CBAJ_P0034121 2410004P03Rik protein_coding protein_coding MGP_CBAJ_T0034122.1 MGP_CBAJ_G0019334.1 mouse_genomes_project 12 15705339 15714574 - MGP_CBAJ_P0034122 2410004P03Rik protein_coding protein_coding MGP_CBAJ_T0034123.1 MGP_CBAJ_G0019334.1 mouse_genomes_project 12 15706888 15714523 - MGP_CBAJ_P0034123 2410004P03Rik protein_coding protein_coding MGP_CBAJ_T0012638.1 MGP_CBAJ_G0010750.1 mouse_genomes_project 12 46229137 46232516 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0034087.1 MGP_CBAJ_G0019322.1 mouse_genomes_project 12 11226890 11227274 + MGP_CBAJ_P0034087 Rpl36-ps3 protein_coding protein_coding MGP_CBAJ_T0034452.1 MGP_CBAJ_G0019458.1 mouse_genomes_project 12 57815430 57862238 + MGP_CBAJ_P0034452 Srp54b protein_coding protein_coding MGP_CBAJ_T0034453.1 MGP_CBAJ_G0019458.1 mouse_genomes_project 12 57815628 57860976 + MGP_CBAJ_P0034453 Srp54b protein_coding unknown_likely_coding MGP_CBAJ_T0012641.1 MGP_CBAJ_G0010753.1 mouse_genomes_project 12 53427640 53428114 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097916.1 MGP_CBAJ_G0036189.1 mouse_genomes_project 12 1542932 1543046 + Gm23756 rRNA rRNA MGP_CBAJ_T0035039.1 MGP_CBAJ_G0019656.1 mouse_genomes_project 12 91216336 91229812 + MGP_CBAJ_P0035039 Vrtn protein_coding protein_coding MGP_CBAJ_T0035040.1 MGP_CBAJ_G0019656.1 mouse_genomes_project 12 91217872 91229812 + MGP_CBAJ_P0035040 Vrtn protein_coding protein_coding MGP_CBAJ_T0035041.1 MGP_CBAJ_G0019656.1 mouse_genomes_project 12 91218213 91229812 + MGP_CBAJ_P0035041 Vrtn protein_coding protein_coding MGP_CBAJ_T0034315.1 MGP_CBAJ_G0019404.1 mouse_genomes_project 12 35800253 35838163 - MGP_CBAJ_P0034315 Ahr protein_coding protein_coding MGP_CBAJ_T0034316.1 MGP_CBAJ_G0019404.1 mouse_genomes_project 12 35807144 35837746 - MGP_CBAJ_P0034316 Ahr protein_coding nonsense_mediated_decay MGP_CBAJ_T0034317.1 MGP_CBAJ_G0019404.1 mouse_genomes_project 12 35818857 35829834 - Ahr protein_coding retained_intron MGP_CBAJ_T0035007.1 MGP_CBAJ_G0019647.1 mouse_genomes_project 12 90873508 90891921 - MGP_CBAJ_P0035007 Fam161b protein_coding protein_coding MGP_CBAJ_T0035008.1 MGP_CBAJ_G0019647.1 mouse_genomes_project 12 90873516 90891909 - MGP_CBAJ_P0035008 Fam161b protein_coding protein_coding MGP_CBAJ_T0035009.1 MGP_CBAJ_G0019647.1 mouse_genomes_project 12 90874691 90891880 - Fam161b protein_coding retained_intron MGP_CBAJ_T0035010.1 MGP_CBAJ_G0019647.1 mouse_genomes_project 12 90876558 90883055 - Fam161b protein_coding retained_intron MGP_CBAJ_T0035743.1 MGP_CBAJ_G0019884.1 mouse_genomes_project 12 123765782 123773915 + MGP_CBAJ_P0035743 4930427A07Rik protein_coding protein_coding MGP_CBAJ_T0035744.1 MGP_CBAJ_G0019884.1 mouse_genomes_project 12 123765791 123766289 + 4930427A07Rik protein_coding retained_intron MGP_CBAJ_T0035745.1 MGP_CBAJ_G0019884.1 mouse_genomes_project 12 123765801 123775588 + MGP_CBAJ_P0035745 4930427A07Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0035746.1 MGP_CBAJ_G0019884.1 mouse_genomes_project 12 123765817 123766952 + 4930427A07Rik protein_coding retained_intron MGP_CBAJ_T0035747.1 MGP_CBAJ_G0019884.1 mouse_genomes_project 12 123765867 123771150 + MGP_CBAJ_P0035747 4930427A07Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0035748.1 MGP_CBAJ_G0019884.1 mouse_genomes_project 12 123766933 123773918 + 4930427A07Rik protein_coding retained_intron MGP_CBAJ_T0101582.1 MGP_CBAJ_G0039613.1 mouse_genomes_project 12 113179581 113185630 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0034782.1 MGP_CBAJ_G0019576.1 mouse_genomes_project 12 82311314 82331023 + MGP_CBAJ_P0034782 Churc1 protein_coding protein_coding MGP_CBAJ_T0034785.1 MGP_CBAJ_G0019576.1 mouse_genomes_project 12 82314237 82321674 + Churc1 protein_coding retained_intron MGP_CBAJ_T0100022.1 MGP_CBAJ_G0038277.1 mouse_genomes_project 12 119839260 119839332 + DQ267100 snoRNA snoRNA MGP_CBAJ_T0035669.1 MGP_CBAJ_G0019855.1 mouse_genomes_project 12 122453024 122458573 - MGP_CBAJ_P0035669 2010107E04Rik protein_coding protein_coding MGP_CBAJ_T0000088.1 MGP_CBAJ_G0000066.1 mouse_genomes_project 12 125179330 125179790 - MGP_CBAJ_P0000088 Ighv13-2 IG_V_gene IG_V_gene MGP_CBAJ_T0000089.1 MGP_CBAJ_G0000066.1 mouse_genomes_project 12 125179330 125179632 - MGP_CBAJ_P0000089 Ighv13-2 IG_V_gene IG_V_gene MGP_CBAJ_T0097925.1 MGP_CBAJ_G0036198.1 mouse_genomes_project 12 57137110 57137220 - Gm24971 rRNA rRNA MGP_CBAJ_T0035784.1 MGP_CBAJ_G0019899.1 mouse_genomes_project 12 130601458 130717551 - MGP_CBAJ_P0035784 Abcb5 protein_coding protein_coding MGP_CBAJ_T0035785.1 MGP_CBAJ_G0019899.1 mouse_genomes_project 12 130621262 130625877 - Abcb5 protein_coding retained_intron MGP_CBAJ_T0035786.1 MGP_CBAJ_G0019899.1 mouse_genomes_project 12 130621735 130673898 - Abcb5 protein_coding processed_transcript MGP_CBAJ_T0035510.1 MGP_CBAJ_G0019808.1 mouse_genomes_project 12 117871691 117973366 - MGP_CBAJ_P0035510 Bcl11b protein_coding protein_coding MGP_CBAJ_T0035511.1 MGP_CBAJ_G0019808.1 mouse_genomes_project 12 117876489 117973178 - MGP_CBAJ_P0035511 Bcl11b protein_coding protein_coding MGP_CBAJ_T0035512.1 MGP_CBAJ_G0019808.1 mouse_genomes_project 12 117876489 117973178 - MGP_CBAJ_P0035512 Bcl11b protein_coding protein_coding MGP_CBAJ_T0034403.1 MGP_CBAJ_G0019434.1 mouse_genomes_project 12 51256471 51268916 + MGP_CBAJ_P0034403 Gm43517 protein_coding protein_coding MGP_CBAJ_T0006323.1 MGP_CBAJ_G0005263.1 mouse_genomes_project 12 54074018 54075465 + Gm26517 lincRNA lincRNA MGP_CBAJ_T0034004.1 MGP_CBAJ_G0019288.1 mouse_genomes_project 12 1836548 1977655 + MGP_CBAJ_P0034004 Itsn2 protein_coding protein_coding MGP_CBAJ_T0034005.1 MGP_CBAJ_G0019288.1 mouse_genomes_project 12 1859808 1933086 + MGP_CBAJ_P0034005 Itsn2 protein_coding unknown_likely_coding MGP_CBAJ_T0006374.1 MGP_CBAJ_G0005304.1 mouse_genomes_project 12 116984345 116987251 + Gm16085 lincRNA lincRNA MGP_CBAJ_T0099999.1 MGP_CBAJ_G0038254.1 mouse_genomes_project 12 69367360 69367485 - Gm26015 snoRNA snoRNA MGP_CBAJ_T0034093.1 MGP_CBAJ_G0019326.1 mouse_genomes_project 12 12559975 12564411 - MGP_CBAJ_P0034093 Fam84a protein_coding protein_coding MGP_CBAJ_T0012692.1 MGP_CBAJ_G0010804.1 mouse_genomes_project 12 124654146 124654581 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006375.1 MGP_CBAJ_G0005305.1 mouse_genomes_project 12 117004869 117020914 - Gm16084 lincRNA lincRNA MGP_CBAJ_T0034085.1 MGP_CBAJ_G0019321.1 mouse_genomes_project 12 10489457 10613566 + MGP_CBAJ_P0034085 Fam49a protein_coding protein_coding MGP_CBAJ_T0034086.1 MGP_CBAJ_G0019321.1 mouse_genomes_project 12 10489457 10613566 + MGP_CBAJ_P0034086 Fam49a protein_coding protein_coding MGP_CBAJ_T0000091.1 MGP_CBAJ_G0000068.1 mouse_genomes_project 12 125223648 125224106 - MGP_CBAJ_P0000091 Ighv6-3 IG_V_gene IG_V_gene MGP_CBAJ_T0003339.1 MGP_CBAJ_G0003068.1 mouse_genomes_project 12 90026919 90034466 - antisense antisense MGP_CBAJ_T0012647.1 MGP_CBAJ_G0010759.1 mouse_genomes_project 12 60459307 60460891 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0034113.1 MGP_CBAJ_G0019332.1 mouse_genomes_project 12 15583560 15681772 + MGP_CBAJ_P0034113 Rock2 protein_coding protein_coding MGP_CBAJ_T0035487.1 MGP_CBAJ_G0019804.1 mouse_genomes_project 12 115306644 115409793 + MGP_CBAJ_P0035487 Ak7 protein_coding protein_coding MGP_CBAJ_T0097936.1 MGP_CBAJ_G0036209.1 mouse_genomes_project 12 131809392 131809510 - Gm25675 rRNA rRNA MGP_CBAJ_T0006302.1 MGP_CBAJ_G0005247.1 mouse_genomes_project 12 9558514 9565270 + 4930511A02Rik lincRNA lincRNA MGP_CBAJ_T0009728.1 MGP_CBAJ_G0007866.1 mouse_genomes_project 12 119805646 119805725 + Mir370 miRNA miRNA MGP_CBAJ_T0034689.1 MGP_CBAJ_G0019542.1 mouse_genomes_project 12 77714967 77748626 + MGP_CBAJ_P0034689 Ppm1a protein_coding protein_coding MGP_CBAJ_T0000053.1 MGP_CBAJ_G0000042.1 mouse_genomes_project 12 124270038 124270524 - MGP_CBAJ_P0000053 Ighv5-2 IG_V_gene IG_V_gene MGP_CBAJ_T0000054.1 MGP_CBAJ_G0000042.1 mouse_genomes_project 12 124270038 124270524 - MGP_CBAJ_P0000054 Ighv5-2 IG_V_gene IG_V_gene MGP_CBAJ_T0009685.1 MGP_CBAJ_G0007823.1 mouse_genomes_project 12 82725041 82725109 - Gm22696 miRNA miRNA MGP_CBAJ_T0000100.1 MGP_CBAJ_G0000076.1 mouse_genomes_project 12 125406070 125406517 - MGP_CBAJ_P0000100 IG_V_gene IG_V_gene MGP_CBAJ_T0034822.1 MGP_CBAJ_G0019594.1 mouse_genomes_project 12 84979636 84996271 - MGP_CBAJ_P0034822 Vti1b protein_coding protein_coding MGP_CBAJ_T0034823.1 MGP_CBAJ_G0019594.1 mouse_genomes_project 12 84979789 84996052 - MGP_CBAJ_P0034823 Vti1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0034824.1 MGP_CBAJ_G0019594.1 mouse_genomes_project 12 84979948 84988754 - MGP_CBAJ_P0034824 Vti1b protein_coding protein_coding MGP_CBAJ_T0034825.1 MGP_CBAJ_G0019594.1 mouse_genomes_project 12 84980136 84989983 - MGP_CBAJ_P0034825 Vti1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0035284.1 MGP_CBAJ_G0019726.1 mouse_genomes_project 12 107539825 107755644 - MGP_CBAJ_P0035284 Foxn3 protein_coding protein_coding MGP_CBAJ_T0035285.1 MGP_CBAJ_G0019726.1 mouse_genomes_project 12 107539939 107754919 - MGP_CBAJ_P0035285 Foxn3 protein_coding protein_coding MGP_CBAJ_T0035286.1 MGP_CBAJ_G0019726.1 mouse_genomes_project 12 107539939 107829763 - MGP_CBAJ_P0035286 Foxn3 protein_coding protein_coding MGP_CBAJ_T0035287.1 MGP_CBAJ_G0019726.1 mouse_genomes_project 12 107541632 107637756 - MGP_CBAJ_P0035287 Foxn3 protein_coding protein_coding MGP_CBAJ_T0035288.1 MGP_CBAJ_G0019726.1 mouse_genomes_project 12 107554334 107637755 - MGP_CBAJ_P0035288 Foxn3 protein_coding protein_coding MGP_CBAJ_T0035289.1 MGP_CBAJ_G0019726.1 mouse_genomes_project 12 107637741 107711818 - Foxn3 protein_coding processed_transcript MGP_CBAJ_T0035290.1 MGP_CBAJ_G0019726.1 mouse_genomes_project 12 107696412 107780616 - MGP_CBAJ_P0035290 Foxn3 protein_coding protein_coding MGP_CBAJ_T0035291.1 MGP_CBAJ_G0019726.1 mouse_genomes_project 12 107747166 107829786 - Foxn3 protein_coding retained_intron MGP_CBAJ_T0035292.1 MGP_CBAJ_G0019726.1 mouse_genomes_project 12 107748200 107829800 - MGP_CBAJ_P0035292 Foxn3 protein_coding protein_coding MGP_CBAJ_T0006394.1 MGP_CBAJ_G0005314.1 mouse_genomes_project 12 119885084 119892072 + B830012L14Rik lincRNA lincRNA MGP_CBAJ_T0000099.1 MGP_CBAJ_G0000075.1 mouse_genomes_project 12 125406070 125406535 - MGP_CBAJ_P0000099 IG_V_gene IG_V_gene MGP_CBAJ_T0034099.1 MGP_CBAJ_G0019330.1 mouse_genomes_project 12 15322118 15419876 - MGP_CBAJ_P0034099 Greb1 protein_coding protein_coding MGP_CBAJ_T0034100.1 MGP_CBAJ_G0019330.1 mouse_genomes_project 12 15322118 15479843 - MGP_CBAJ_P0034100 Greb1 protein_coding protein_coding MGP_CBAJ_T0034101.1 MGP_CBAJ_G0019330.1 mouse_genomes_project 12 15323583 15419830 - MGP_CBAJ_P0034101 Greb1 protein_coding protein_coding MGP_CBAJ_T0034102.1 MGP_CBAJ_G0019330.1 mouse_genomes_project 12 15325325 15326557 - Greb1 protein_coding retained_intron MGP_CBAJ_T0034103.1 MGP_CBAJ_G0019330.1 mouse_genomes_project 12 15336666 15344665 - Greb1 protein_coding retained_intron MGP_CBAJ_T0034104.1 MGP_CBAJ_G0019330.1 mouse_genomes_project 12 15344393 15402890 - Greb1 protein_coding retained_intron MGP_CBAJ_T0034105.1 MGP_CBAJ_G0019330.1 mouse_genomes_project 12 15360489 15367468 - Greb1 protein_coding retained_intron MGP_CBAJ_T0034106.1 MGP_CBAJ_G0019330.1 mouse_genomes_project 12 15365585 15367879 - Greb1 protein_coding retained_intron MGP_CBAJ_T0034107.1 MGP_CBAJ_G0019330.1 mouse_genomes_project 12 15365596 15368019 - MGP_CBAJ_P0034107 Greb1 protein_coding protein_coding MGP_CBAJ_T0034108.1 MGP_CBAJ_G0019330.1 mouse_genomes_project 12 15367330 15371205 - MGP_CBAJ_P0034108 Greb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034109.1 MGP_CBAJ_G0019330.1 mouse_genomes_project 12 15382506 15402791 - Greb1 protein_coding retained_intron MGP_CBAJ_T0034110.1 MGP_CBAJ_G0019330.1 mouse_genomes_project 12 15395936 15480040 - MGP_CBAJ_P0034110 Greb1 protein_coding protein_coding MGP_CBAJ_T0100037.1 MGP_CBAJ_G0038292.1 mouse_genomes_project 12 119877552 119877623 + Gm22205 snoRNA snoRNA MGP_CBAJ_T0098774.1 MGP_CBAJ_G0037029.1 mouse_genomes_project 12 84928003 84928108 - Gm27297 snRNA snRNA MGP_CBAJ_T0009667.1 MGP_CBAJ_G0007805.1 mouse_genomes_project 12 30304486 30304693 - Gm25243 miRNA miRNA MGP_CBAJ_T0100026.1 MGP_CBAJ_G0038281.1 mouse_genomes_project 12 119845990 119846062 + DQ267102 snoRNA snoRNA MGP_CBAJ_T0100029.1 MGP_CBAJ_G0038284.1 mouse_genomes_project 12 119863463 119863545 + Gm23347 snoRNA snoRNA MGP_CBAJ_T0003347.1 MGP_CBAJ_G0003075.1 mouse_genomes_project 12 111485118 111490955 + Gm20069 antisense antisense MGP_CBAJ_T0034961.1 MGP_CBAJ_G0019632.1 mouse_genomes_project 12 90205688 90340822 - MGP_CBAJ_P0034961 Numb protein_coding protein_coding MGP_CBAJ_T0034962.1 MGP_CBAJ_G0019632.1 mouse_genomes_project 12 90205690 90294729 - MGP_CBAJ_P0034962 Numb protein_coding nonsense_mediated_decay MGP_CBAJ_T0034963.1 MGP_CBAJ_G0019632.1 mouse_genomes_project 12 90205725 90340732 - MGP_CBAJ_P0034963 Numb protein_coding nonsense_mediated_decay MGP_CBAJ_T0034964.1 MGP_CBAJ_G0019632.1 mouse_genomes_project 12 90207093 90256894 - MGP_CBAJ_P0034964 Numb protein_coding protein_coding MGP_CBAJ_T0034965.1 MGP_CBAJ_G0019632.1 mouse_genomes_project 12 90207093 90256894 - MGP_CBAJ_P0034965 Numb protein_coding protein_coding MGP_CBAJ_T0034966.1 MGP_CBAJ_G0019632.1 mouse_genomes_project 12 90207093 90256894 - MGP_CBAJ_P0034966 Numb protein_coding protein_coding MGP_CBAJ_T0034967.1 MGP_CBAJ_G0019632.1 mouse_genomes_project 12 90215592 90340755 - MGP_CBAJ_P0034967 Numb protein_coding protein_coding MGP_CBAJ_T0034968.1 MGP_CBAJ_G0019632.1 mouse_genomes_project 12 90219755 90340744 - MGP_CBAJ_P0034968 Numb protein_coding protein_coding MGP_CBAJ_T0034969.1 MGP_CBAJ_G0019632.1 mouse_genomes_project 12 90219826 90340771 - MGP_CBAJ_P0034969 Numb protein_coding protein_coding MGP_CBAJ_T0034970.1 MGP_CBAJ_G0019632.1 mouse_genomes_project 12 90222885 90340778 - MGP_CBAJ_P0034970 Numb protein_coding protein_coding MGP_CBAJ_T0034971.1 MGP_CBAJ_G0019632.1 mouse_genomes_project 12 90246370 90294717 - Numb protein_coding retained_intron MGP_CBAJ_T0035773.1 MGP_CBAJ_G0019894.1 mouse_genomes_project 12 129115060 129374654 + MGP_CBAJ_P0035773 Rapgef5 protein_coding protein_coding MGP_CBAJ_T0035774.1 MGP_CBAJ_G0019894.1 mouse_genomes_project 12 129132434 129377417 + MGP_CBAJ_P0035774 Rapgef5 protein_coding unknown_likely_coding MGP_CBAJ_T0009736.1 MGP_CBAJ_G0007874.1 mouse_genomes_project 12 119901592 119901712 + Mir1197 miRNA miRNA MGP_CBAJ_T0006367.1 MGP_CBAJ_G0005300.1 mouse_genomes_project 12 116482253 116515939 - 4933406K04Rik lincRNA lincRNA MGP_CBAJ_T0006368.1 MGP_CBAJ_G0005300.1 mouse_genomes_project 12 116494571 116515901 - 4933406K04Rik lincRNA lincRNA MGP_CBAJ_T0006369.1 MGP_CBAJ_G0005300.1 mouse_genomes_project 12 116500059 116515910 - 4933406K04Rik lincRNA lincRNA MGP_CBAJ_T0006370.1 MGP_CBAJ_G0005300.1 mouse_genomes_project 12 116505015 116515939 - 4933406K04Rik lincRNA lincRNA MGP_CBAJ_T0101578.1 MGP_CBAJ_G0039609.1 mouse_genomes_project 12 112823764 112897221 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0034547.1 MGP_CBAJ_G0019492.1 mouse_genomes_project 12 69005234 69016827 - MGP_CBAJ_P0034547 Fkbp3 protein_coding protein_coding MGP_CBAJ_T0034215.1 MGP_CBAJ_G0019369.1 mouse_genomes_project 12 29787929 29860644 - MGP_CBAJ_P0034215 Tpo protein_coding protein_coding MGP_CBAJ_T0034216.1 MGP_CBAJ_G0019369.1 mouse_genomes_project 12 29820711 29823573 - Tpo protein_coding retained_intron MGP_CBAJ_T0034217.1 MGP_CBAJ_G0019369.1 mouse_genomes_project 12 29844718 29859916 - MGP_CBAJ_P0034217 Tpo protein_coding protein_coding MGP_CBAJ_T0034325.1 MGP_CBAJ_G0019408.1 mouse_genomes_project 12 36456865 36458311 + MGP_CBAJ_P0034325 Gm5434 protein_coding protein_coding MGP_CBAJ_T0034972.1 MGP_CBAJ_G0019633.1 mouse_genomes_project 12 90372440 90374786 + MGP_CBAJ_P0034972 2410016O06Rik protein_coding protein_coding MGP_CBAJ_T0009708.1 MGP_CBAJ_G0007846.1 mouse_genomes_project 12 119729954 119730034 + Mir1906-2 miRNA miRNA MGP_CBAJ_T0098783.1 MGP_CBAJ_G0037038.1 mouse_genomes_project 12 119003095 119003456 - Gm22079 snRNA snRNA MGP_CBAJ_T0034139.1 MGP_CBAJ_G0019339.1 mouse_genomes_project 12 16339988 16348535 + MGP_CBAJ_P0034139 Odc1 protein_coding protein_coding MGP_CBAJ_T0097922.1 MGP_CBAJ_G0036195.1 mouse_genomes_project 12 28734511 28734626 - Gm23342 rRNA rRNA MGP_CBAJ_T0035507.1 MGP_CBAJ_G0019806.1 mouse_genomes_project 12 115690223 115760181 + MGP_CBAJ_P0035507 Vrk1 protein_coding protein_coding MGP_CBAJ_T0035508.1 MGP_CBAJ_G0019806.1 mouse_genomes_project 12 115691213 115762553 + MGP_CBAJ_P0035508 Vrk1 protein_coding protein_coding MGP_CBAJ_T0035265.1 MGP_CBAJ_G0019719.1 mouse_genomes_project 12 106481339 106490824 + MGP_CBAJ_P0035265 Gpr65 protein_coding protein_coding MGP_CBAJ_T0034506.1 MGP_CBAJ_G0019482.1 mouse_genomes_project 12 62212746 62230481 + MGP_CBAJ_P0034506 Mia2 protein_coding protein_coding MGP_CBAJ_T0034507.1 MGP_CBAJ_G0019482.1 mouse_genomes_project 12 62212747 62237386 + MGP_CBAJ_P0034507 Mia2 protein_coding unknown_likely_coding MGP_CBAJ_T0034508.1 MGP_CBAJ_G0019482.1 mouse_genomes_project 12 62212747 62238049 + MGP_CBAJ_P0034508 Mia2 protein_coding unknown_likely_coding MGP_CBAJ_T0017057.1 MGP_CBAJ_G0014979.1 mouse_genomes_project 12 113062583 113080000 - Gm28577 processed_transcript processed_transcript MGP_CBAJ_T0034741.1 MGP_CBAJ_G0019564.1 mouse_genomes_project 12 81236941 81308817 + MGP_CBAJ_P0034741 Syne2 protein_coding protein_coding MGP_CBAJ_T0034742.1 MGP_CBAJ_G0019564.1 mouse_genomes_project 12 81237125 81564329 + MGP_CBAJ_P0034742 Syne2 protein_coding protein_coding MGP_CBAJ_T0034743.1 MGP_CBAJ_G0019564.1 mouse_genomes_project 12 81237125 81564349 + MGP_CBAJ_P0034743 Syne2 protein_coding protein_coding MGP_CBAJ_T0034744.1 MGP_CBAJ_G0019564.1 mouse_genomes_project 12 81237130 81321994 + Syne2 protein_coding retained_intron MGP_CBAJ_T0034745.1 MGP_CBAJ_G0019564.1 mouse_genomes_project 12 81237136 81339838 + MGP_CBAJ_P0034745 Syne2 protein_coding protein_coding MGP_CBAJ_T0034746.1 MGP_CBAJ_G0019564.1 mouse_genomes_project 12 81237157 81336864 + Syne2 protein_coding retained_intron MGP_CBAJ_T0034747.1 MGP_CBAJ_G0019564.1 mouse_genomes_project 12 81276023 81308639 + MGP_CBAJ_P0034747 Syne2 protein_coding protein_coding MGP_CBAJ_T0034748.1 MGP_CBAJ_G0019564.1 mouse_genomes_project 12 81340178 81344848 + Syne2 protein_coding retained_intron MGP_CBAJ_T0034749.1 MGP_CBAJ_G0019564.1 mouse_genomes_project 12 81470860 81476376 + MGP_CBAJ_P0034749 Syne2 protein_coding protein_coding MGP_CBAJ_T0034750.1 MGP_CBAJ_G0019564.1 mouse_genomes_project 12 81480172 81564343 + MGP_CBAJ_P0034750 Syne2 protein_coding protein_coding MGP_CBAJ_T0034751.1 MGP_CBAJ_G0019564.1 mouse_genomes_project 12 81497180 81564329 + MGP_CBAJ_P0034751 Syne2 protein_coding protein_coding MGP_CBAJ_T0034752.1 MGP_CBAJ_G0019564.1 mouse_genomes_project 12 81510473 81517336 + Syne2 protein_coding retained_intron MGP_CBAJ_T0034753.1 MGP_CBAJ_G0019564.1 mouse_genomes_project 12 81522808 81547828 + MGP_CBAJ_P0034753 Syne2 protein_coding protein_coding MGP_CBAJ_T0034754.1 MGP_CBAJ_G0019564.1 mouse_genomes_project 12 81535047 81548438 + MGP_CBAJ_P0034754 Syne2 protein_coding protein_coding MGP_CBAJ_T0034755.1 MGP_CBAJ_G0019564.1 mouse_genomes_project 12 81535330 81551373 + MGP_CBAJ_P0034755 Syne2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034756.1 MGP_CBAJ_G0019564.1 mouse_genomes_project 12 81541151 81564349 + MGP_CBAJ_P0034756 Syne2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0034757.1 MGP_CBAJ_G0019564.1 mouse_genomes_project 12 81554329 81559421 + Syne2 protein_coding retained_intron MGP_CBAJ_T0034764.1 MGP_CBAJ_G0019568.1 mouse_genomes_project 12 81816781 81827425 + MGP_CBAJ_P0034764 Akap5 protein_coding protein_coding MGP_CBAJ_T0034765.1 MGP_CBAJ_G0019568.1 mouse_genomes_project 12 81816781 81827423 + MGP_CBAJ_P0034765 Akap5 protein_coding protein_coding MGP_CBAJ_T0034766.1 MGP_CBAJ_G0019568.1 mouse_genomes_project 12 81816795 81823326 + MGP_CBAJ_P0034766 Akap5 protein_coding protein_coding MGP_CBAJ_T0033994.1 MGP_CBAJ_G0019284.1 mouse_genomes_project 12 1362541 1384651 - MGP_CBAJ_P0033994 Cenpo protein_coding protein_coding MGP_CBAJ_T0033995.1 MGP_CBAJ_G0019284.1 mouse_genomes_project 12 1364359 1399785 - MGP_CBAJ_P0033995 Cenpo protein_coding protein_coding MGP_CBAJ_T0033997.1 MGP_CBAJ_G0019284.1 mouse_genomes_project 12 1381586 1384611 - Cenpo protein_coding retained_intron MGP_CBAJ_T0033998.1 MGP_CBAJ_G0019284.1 mouse_genomes_project 12 1382598 1399591 - MGP_CBAJ_P0033998 Cenpo protein_coding protein_coding MGP_CBAJ_T0033999.1 MGP_CBAJ_G0019284.1 mouse_genomes_project 12 1383462 1397823 - MGP_CBAJ_P0033999 Cenpo protein_coding protein_coding MGP_CBAJ_T0034000.1 MGP_CBAJ_G0019284.1 mouse_genomes_project 12 1383796 1399758 - Cenpo protein_coding retained_intron MGP_CBAJ_T0009731.1 MGP_CBAJ_G0007869.1 mouse_genomes_project 12 119899450 119899532 + Mir411 miRNA miRNA MGP_CBAJ_T0034203.1 MGP_CBAJ_G0019365.1 mouse_genomes_project 12 28347970 28416937 - MGP_CBAJ_P0034203 Trappc12 protein_coding protein_coding MGP_CBAJ_T0034204.1 MGP_CBAJ_G0019365.1 mouse_genomes_project 12 28347970 28416878 - MGP_CBAJ_P0034204 Trappc12 protein_coding protein_coding MGP_CBAJ_T0034205.1 MGP_CBAJ_G0019365.1 mouse_genomes_project 12 28367083 28416937 - MGP_CBAJ_P0034205 Trappc12 protein_coding protein_coding MGP_CBAJ_T0034738.1 MGP_CBAJ_G0019562.1 mouse_genomes_project 12 81021241 81067273 - MGP_CBAJ_P0034738 Wdr89 protein_coding protein_coding MGP_CBAJ_T0034739.1 MGP_CBAJ_G0019562.1 mouse_genomes_project 12 81022046 81067263 - MGP_CBAJ_P0034739 Wdr89 protein_coding protein_coding MGP_CBAJ_T0035443.1 MGP_CBAJ_G0019776.1 mouse_genomes_project 12 113112472 113128468 - MGP_CBAJ_P0035443 Serpina12 protein_coding protein_coding MGP_CBAJ_T0034587.1 MGP_CBAJ_G0019510.1 mouse_genomes_project 12 74120498 74126223 - MGP_CBAJ_P0034587 Vcpkmt protein_coding protein_coding MGP_CBAJ_T0034588.1 MGP_CBAJ_G0019510.1 mouse_genomes_project 12 74121097 74126216 - MGP_CBAJ_P0034588 Vcpkmt protein_coding unknown_likely_coding MGP_CBAJ_T0000096.1 MGP_CBAJ_G0000073.1 mouse_genomes_project 12 125309737 125310177 - MGP_CBAJ_P0000096 Ighv8-2 IG_V_gene IG_V_gene MGP_CBAJ_T0009710.1 MGP_CBAJ_G0007848.1 mouse_genomes_project 12 119759561 119759652 + Mir673 miRNA miRNA MGP_CBAJ_T0098785.1 MGP_CBAJ_G0037040.1 mouse_genomes_project 12 128000262 128000366 - Gm25112 snRNA snRNA MGP_CBAJ_T0100021.1 MGP_CBAJ_G0038276.1 mouse_genomes_project 12 119833394 119833468 + Gm24895 snoRNA snoRNA MGP_CBAJ_T0033930.1 MGP_CBAJ_G0019274.1 mouse_genomes_project 12 239199 305341 - MGP_CBAJ_P0033930 Rab10 protein_coding protein_coding MGP_CBAJ_T0003375.1 MGP_CBAJ_G0003098.1 mouse_genomes_project 13 43402887 43411207 + Gm28564 antisense antisense MGP_CBAJ_T0036924.1 MGP_CBAJ_G0020345.1 mouse_genomes_project 13 62522903 62666000 + MGP_CBAJ_P0036924 protein_coding protein_coding MGP_CBAJ_T0036925.1 MGP_CBAJ_G0020345.1 mouse_genomes_project 13 62524207 62879363 + MGP_CBAJ_P0036925 protein_coding protein_coding MGP_CBAJ_T0036839.1 MGP_CBAJ_G0020316.1 mouse_genomes_project 13 58974263 59033756 + MGP_CBAJ_P0036839 Ddx46 protein_coding protein_coding MGP_CBAJ_T0036840.1 MGP_CBAJ_G0020316.1 mouse_genomes_project 13 58974263 59033756 + MGP_CBAJ_P0036840 Ddx46 protein_coding protein_coding MGP_CBAJ_T0036841.1 MGP_CBAJ_G0020316.1 mouse_genomes_project 13 59010408 59033764 + MGP_CBAJ_P0036841 Ddx46 protein_coding unknown_likely_coding MGP_CBAJ_T0017087.1 MGP_CBAJ_G0014987.1 mouse_genomes_project 13 20682700 20689980 + Gm11292 processed_transcript processed_transcript MGP_CBAJ_T0035849.1 MGP_CBAJ_G0019927.1 mouse_genomes_project 13 5216930 5853515 + MGP_CBAJ_P0035849 Adarb2 protein_coding protein_coding MGP_CBAJ_T0035850.1 MGP_CBAJ_G0019927.1 mouse_genomes_project 13 5216972 5365909 + MGP_CBAJ_P0035850 Adarb2 protein_coding protein_coding MGP_CBAJ_T0035851.1 MGP_CBAJ_G0019927.1 mouse_genomes_project 13 5216977 5855382 + MGP_CBAJ_P0035851 Adarb2 protein_coding protein_coding MGP_CBAJ_T0035852.1 MGP_CBAJ_G0019927.1 mouse_genomes_project 13 5606359 5849387 + MGP_CBAJ_P0035852 Adarb2 protein_coding protein_coding MGP_CBAJ_T0036000.1 MGP_CBAJ_G0019976.1 mouse_genomes_project 13 19615382 19616333 - MGP_CBAJ_P0036000 Olfr1370 protein_coding protein_coding MGP_CBAJ_T0036048.1 MGP_CBAJ_G0020000.1 mouse_genomes_project 13 20336755 20337050 - MGP_CBAJ_P0036048 protein_coding protein_coding MGP_CBAJ_T0036344.1 MGP_CBAJ_G0020155.1 mouse_genomes_project 13 34653325 34691445 + MGP_CBAJ_P0036344 Bphl protein_coding protein_coding MGP_CBAJ_T0003437.1 MGP_CBAJ_G0003134.1 mouse_genomes_project 13 130060380 130080017 - Gm16263 antisense antisense MGP_CBAJ_T0036092.1 MGP_CBAJ_G0020032.1 mouse_genomes_project 13 21684634 21685624 - MGP_CBAJ_P0036092 Vmn1r211 protein_coding protein_coding MGP_CBAJ_T0037475.1 MGP_CBAJ_G0020540.1 mouse_genomes_project 13 103347672 103602816 - MGP_CBAJ_P0037475 Pde8b protein_coding protein_coding MGP_CBAJ_T0037476.1 MGP_CBAJ_G0020540.1 mouse_genomes_project 13 103347677 103357475 - MGP_CBAJ_P0037476 Pde8b protein_coding protein_coding MGP_CBAJ_T0037477.1 MGP_CBAJ_G0020540.1 mouse_genomes_project 13 103347723 103567938 - MGP_CBAJ_P0037477 Pde8b protein_coding protein_coding MGP_CBAJ_T0037478.1 MGP_CBAJ_G0020540.1 mouse_genomes_project 13 103348548 103369284 - Pde8b protein_coding processed_transcript MGP_CBAJ_T0037479.1 MGP_CBAJ_G0020540.1 mouse_genomes_project 13 103349321 103602646 - MGP_CBAJ_P0037479 Pde8b protein_coding protein_coding MGP_CBAJ_T0037480.1 MGP_CBAJ_G0020540.1 mouse_genomes_project 13 103349338 103567685 - MGP_CBAJ_P0037480 Pde8b protein_coding protein_coding MGP_CBAJ_T0037481.1 MGP_CBAJ_G0020540.1 mouse_genomes_project 13 103349338 103567685 - MGP_CBAJ_P0037481 Pde8b protein_coding protein_coding MGP_CBAJ_T0037482.1 MGP_CBAJ_G0020540.1 mouse_genomes_project 13 103349338 103567685 - MGP_CBAJ_P0037482 Pde8b protein_coding unknown_likely_coding MGP_CBAJ_T0037483.1 MGP_CBAJ_G0020540.1 mouse_genomes_project 13 103349338 103567685 - MGP_CBAJ_P0037483 Pde8b protein_coding protein_coding MGP_CBAJ_T0037484.1 MGP_CBAJ_G0020540.1 mouse_genomes_project 13 103357167 103568427 - MGP_CBAJ_P0037484 Pde8b protein_coding protein_coding MGP_CBAJ_T0037485.1 MGP_CBAJ_G0020540.1 mouse_genomes_project 13 103366239 103602754 - MGP_CBAJ_P0037485 Pde8b protein_coding protein_coding MGP_CBAJ_T0037486.1 MGP_CBAJ_G0020540.1 mouse_genomes_project 13 103366685 103376697 - Pde8b protein_coding retained_intron MGP_CBAJ_T0037487.1 MGP_CBAJ_G0020540.1 mouse_genomes_project 13 103413642 103567938 - Pde8b protein_coding retained_intron MGP_CBAJ_T0037488.1 MGP_CBAJ_G0020540.1 mouse_genomes_project 13 103424492 103602795 - MGP_CBAJ_P0037488 Pde8b protein_coding protein_coding MGP_CBAJ_T0037489.1 MGP_CBAJ_G0020540.1 mouse_genomes_project 13 103429420 103529117 - Pde8b protein_coding processed_transcript MGP_CBAJ_T0036628.1 MGP_CBAJ_G0020262.1 mouse_genomes_project 13 54510502 54528647 - MGP_CBAJ_P0036628 Gm15440 protein_coding protein_coding MGP_CBAJ_T0036476.1 MGP_CBAJ_G0020209.1 mouse_genomes_project 13 45120511 45127767 + MGP_CBAJ_P0036476 Nol7 protein_coding protein_coding MGP_CBAJ_T0006486.1 MGP_CBAJ_G0005371.1 mouse_genomes_project 13 58105667 58106211 + Gm29431 lincRNA lincRNA MGP_CBAJ_T0037857.1 MGP_CBAJ_G0020668.1 mouse_genomes_project 13 129717190 129718685 + MGP_CBAJ_P0037857 B430218F22Rik protein_coding protein_coding MGP_CBAJ_T0037575.1 MGP_CBAJ_G0020575.1 mouse_genomes_project 13 107900721 107901202 - MGP_CBAJ_P0037575 1700024P04Rik protein_coding protein_coding MGP_CBAJ_T0006496.1 MGP_CBAJ_G0005379.1 mouse_genomes_project 13 72595537 72606059 + 9430065F17Rik lincRNA lincRNA MGP_CBAJ_T0006497.1 MGP_CBAJ_G0005379.1 mouse_genomes_project 13 72595566 72608833 + 9430065F17Rik lincRNA lincRNA MGP_CBAJ_T0036102.1 MGP_CBAJ_G0020042.1 mouse_genomes_project 13 22162570 22163499 - MGP_CBAJ_P0036102 Vmn1r188 protein_coding protein_coding MGP_CBAJ_T0006544.1 MGP_CBAJ_G0005414.1 mouse_genomes_project 13 122313837 122315347 + Gm15324 lincRNA lincRNA MGP_CBAJ_T0000848.1 MGP_CBAJ_G0000783.1 mouse_genomes_project 13 68129239 68130193 - TEC TEC MGP_CBAJ_T0036701.1 MGP_CBAJ_G0020283.1 mouse_genomes_project 13 57766334 57788748 - MGP_CBAJ_P0036701 Cltb protein_coding protein_coding MGP_CBAJ_T0036702.1 MGP_CBAJ_G0020283.1 mouse_genomes_project 13 57767471 57773095 - MGP_CBAJ_P0036702 Cltb protein_coding protein_coding MGP_CBAJ_T0036703.1 MGP_CBAJ_G0020283.1 mouse_genomes_project 13 57767518 57788696 - MGP_CBAJ_P0036703 Cltb protein_coding protein_coding MGP_CBAJ_T0036704.1 MGP_CBAJ_G0020283.1 mouse_genomes_project 13 57769973 57788696 - Cltb protein_coding retained_intron MGP_CBAJ_T0006531.1 MGP_CBAJ_G0005402.1 mouse_genomes_project 13 107298356 107299218 - Gm29501 lincRNA lincRNA MGP_CBAJ_T0098792.1 MGP_CBAJ_G0037047.1 mouse_genomes_project 13 15401686 15401793 + Gm25020 snRNA snRNA MGP_CBAJ_T0098788.1 MGP_CBAJ_G0037043.1 mouse_genomes_project 13 11018663 11018763 - Gm26133 snRNA snRNA MGP_CBAJ_T0037812.1 MGP_CBAJ_G0020644.1 mouse_genomes_project 13 123611538 123614527 + MGP_CBAJ_P0037812 Ccno protein_coding protein_coding MGP_CBAJ_T0036807.1 MGP_CBAJ_G0020307.1 mouse_genomes_project 13 58782701 58791845 + MGP_CBAJ_P0036807 Prr7 protein_coding protein_coding MGP_CBAJ_T0036249.1 MGP_CBAJ_G0020113.1 mouse_genomes_project 13 27540290 27556551 + MGP_CBAJ_P0036249 protein_coding protein_coding MGP_CBAJ_T0036382.1 MGP_CBAJ_G0020171.1 mouse_genomes_project 13 36845797 37008669 - MGP_CBAJ_P0036382 Lyrm4 protein_coding protein_coding MGP_CBAJ_T0035853.1 MGP_CBAJ_G0019928.1 mouse_genomes_project 13 5894057 5963118 - MGP_CBAJ_P0035853 Wdr37 protein_coding protein_coding MGP_CBAJ_T0035854.1 MGP_CBAJ_G0019928.1 mouse_genomes_project 13 5894084 5962432 - MGP_CBAJ_P0035854 Wdr37 protein_coding protein_coding MGP_CBAJ_T0035855.1 MGP_CBAJ_G0019928.1 mouse_genomes_project 13 5896825 5936605 - MGP_CBAJ_P0035855 Wdr37 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035856.1 MGP_CBAJ_G0019928.1 mouse_genomes_project 13 5903623 5938526 - MGP_CBAJ_P0035856 Wdr37 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035857.1 MGP_CBAJ_G0019928.1 mouse_genomes_project 13 5903681 5942916 - MGP_CBAJ_P0035857 Wdr37 protein_coding protein_coding MGP_CBAJ_T0035858.1 MGP_CBAJ_G0019928.1 mouse_genomes_project 13 5919158 5921004 - Wdr37 protein_coding retained_intron MGP_CBAJ_T0035859.1 MGP_CBAJ_G0019928.1 mouse_genomes_project 13 5928435 5947960 - MGP_CBAJ_P0035859 Wdr37 protein_coding protein_coding MGP_CBAJ_T0035860.1 MGP_CBAJ_G0019928.1 mouse_genomes_project 13 5936647 5963124 - MGP_CBAJ_P0035860 Wdr37 protein_coding protein_coding MGP_CBAJ_T0035861.1 MGP_CBAJ_G0019928.1 mouse_genomes_project 13 5938510 5950423 - MGP_CBAJ_P0035861 Wdr37 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035862.1 MGP_CBAJ_G0019928.1 mouse_genomes_project 13 5939606 5962411 - MGP_CBAJ_P0035862 Wdr37 protein_coding protein_coding MGP_CBAJ_T0035863.1 MGP_CBAJ_G0019928.1 mouse_genomes_project 13 5941877 5962367 - MGP_CBAJ_P0035863 Wdr37 protein_coding protein_coding MGP_CBAJ_T0035864.1 MGP_CBAJ_G0019928.1 mouse_genomes_project 13 5941880 5950420 - MGP_CBAJ_P0035864 Wdr37 protein_coding protein_coding MGP_CBAJ_T0035865.1 MGP_CBAJ_G0019928.1 mouse_genomes_project 13 5942533 5962382 - Wdr37 protein_coding processed_transcript MGP_CBAJ_T0035866.1 MGP_CBAJ_G0019928.1 mouse_genomes_project 13 5942881 5947973 - Wdr37 protein_coding processed_transcript MGP_CBAJ_T0035867.1 MGP_CBAJ_G0019928.1 mouse_genomes_project 13 5946114 5963297 - MGP_CBAJ_P0035867 Wdr37 protein_coding protein_coding MGP_CBAJ_T0035868.1 MGP_CBAJ_G0019928.1 mouse_genomes_project 13 5950333 5962395 - MGP_CBAJ_P0035868 Wdr37 protein_coding protein_coding MGP_CBAJ_T0036036.1 MGP_CBAJ_G0019992.1 mouse_genomes_project 13 20142316 20143303 - MGP_CBAJ_P0036036 protein_coding protein_coding MGP_CBAJ_T0036298.1 MGP_CBAJ_G0020137.1 mouse_genomes_project 13 33254004 33263095 - MGP_CBAJ_P0036298 Serpinb1a protein_coding protein_coding MGP_CBAJ_T0036299.1 MGP_CBAJ_G0020137.1 mouse_genomes_project 13 33254005 33263095 - MGP_CBAJ_P0036299 Serpinb1a protein_coding protein_coding MGP_CBAJ_T0009790.1 MGP_CBAJ_G0007928.1 mouse_genomes_project 13 3967688 3967798 - Gm22689 miRNA miRNA MGP_CBAJ_T0036220.1 MGP_CBAJ_G0020098.1 mouse_genomes_project 13 26747226 26756875 + MGP_CBAJ_P0036220 Prl3c1 protein_coding protein_coding MGP_CBAJ_T0036221.1 MGP_CBAJ_G0020098.1 mouse_genomes_project 13 26752028 26756875 + MGP_CBAJ_P0036221 Prl3c1 protein_coding protein_coding MGP_CBAJ_T0036222.1 MGP_CBAJ_G0020098.1 mouse_genomes_project 13 26752478 26756738 + MGP_CBAJ_P0036222 Prl3c1 protein_coding protein_coding MGP_CBAJ_T0036868.1 MGP_CBAJ_G0020330.1 mouse_genomes_project 13 60016441 60022518 - MGP_CBAJ_P0036868 Lect2 protein_coding protein_coding MGP_CBAJ_T0037493.1 MGP_CBAJ_G0020543.1 mouse_genomes_project 13 103795332 103808146 - MGP_CBAJ_P0037493 Crhbp protein_coding protein_coding MGP_CBAJ_T0101604.1 MGP_CBAJ_G0039635.1 mouse_genomes_project 13 21790362 21791323 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0012785.1 MGP_CBAJ_G0010897.1 mouse_genomes_project 13 95644010 95644806 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0037434.1 MGP_CBAJ_G0020526.1 mouse_genomes_project 13 101211763 101270917 - MGP_CBAJ_P0037434 Papd4 protein_coding protein_coding MGP_CBAJ_T0035979.1 MGP_CBAJ_G0019968.1 mouse_genomes_project 13 17756034 17766298 - Stard3nl protein_coding retained_intron MGP_CBAJ_T0035980.1 MGP_CBAJ_G0019968.1 mouse_genomes_project 13 17756037 17757486 - Stard3nl protein_coding retained_intron MGP_CBAJ_T0035981.1 MGP_CBAJ_G0019968.1 mouse_genomes_project 13 17756037 17794114 - MGP_CBAJ_P0035981 Stard3nl protein_coding protein_coding MGP_CBAJ_T0035982.1 MGP_CBAJ_G0019968.1 mouse_genomes_project 13 17756361 17768703 - Stard3nl protein_coding retained_intron MGP_CBAJ_T0035983.1 MGP_CBAJ_G0019968.1 mouse_genomes_project 13 17763297 17794101 - MGP_CBAJ_P0035983 Stard3nl protein_coding protein_coding MGP_CBAJ_T0035984.1 MGP_CBAJ_G0019968.1 mouse_genomes_project 13 17767741 17794162 - Stard3nl protein_coding retained_intron MGP_CBAJ_T0035985.1 MGP_CBAJ_G0019968.1 mouse_genomes_project 13 17768658 17774981 - Stard3nl protein_coding retained_intron MGP_CBAJ_T0035986.1 MGP_CBAJ_G0019968.1 mouse_genomes_project 13 17774907 17794126 - MGP_CBAJ_P0035986 Stard3nl protein_coding protein_coding MGP_CBAJ_T0009799.1 MGP_CBAJ_G0007937.1 mouse_genomes_project 13 22532427 22532536 + n-TStga1 miRNA miRNA MGP_CBAJ_T0036450.1 MGP_CBAJ_G0020202.1 mouse_genomes_project 13 43317199 43408925 - MGP_CBAJ_P0036450 Adtrp protein_coding protein_coding MGP_CBAJ_T0036451.1 MGP_CBAJ_G0020202.1 mouse_genomes_project 13 43318184 43409121 - MGP_CBAJ_P0036451 Adtrp protein_coding protein_coding MGP_CBAJ_T0036452.1 MGP_CBAJ_G0020202.1 mouse_genomes_project 13 43318641 43409053 - MGP_CBAJ_P0036452 Adtrp protein_coding protein_coding MGP_CBAJ_T0036453.1 MGP_CBAJ_G0020202.1 mouse_genomes_project 13 43331564 43386601 - MGP_CBAJ_P0036453 Adtrp protein_coding protein_coding MGP_CBAJ_T0036861.1 MGP_CBAJ_G0020326.1 mouse_genomes_project 13 59797733 59800472 + MGP_CBAJ_P0036861 Gm10782 protein_coding protein_coding MGP_CBAJ_T0098794.1 MGP_CBAJ_G0037049.1 mouse_genomes_project 13 19389112 19389236 + Gm25605 snRNA snRNA MGP_CBAJ_T0011227.1 MGP_CBAJ_G0009365.1 mouse_genomes_project 13 53767900 53768026 + Gm22199 misc_RNA misc_RNA MGP_CBAJ_T0036028.1 MGP_CBAJ_G0019986.1 mouse_genomes_project 13 20068346 20069809 - MGP_CBAJ_P0036028 Nkapl protein_coding protein_coding MGP_CBAJ_T0097770.1 MGP_CBAJ_G0036043.1 mouse_genomes_project 13 99098176 99098603 + pseudogene pseudogene MGP_CBAJ_T0037847.1 MGP_CBAJ_G0020662.1 mouse_genomes_project 13 127341196 127365124 - MGP_CBAJ_P0037847 Isl1 protein_coding protein_coding MGP_CBAJ_T0037848.1 MGP_CBAJ_G0020662.1 mouse_genomes_project 13 127342179 127364857 - MGP_CBAJ_P0037848 Isl1 protein_coding protein_coding MGP_CBAJ_T0037849.1 MGP_CBAJ_G0020662.1 mouse_genomes_project 13 127342311 127354334 - Isl1 protein_coding retained_intron MGP_CBAJ_T0037850.1 MGP_CBAJ_G0020662.1 mouse_genomes_project 13 127354028 127361849 - Isl1 protein_coding processed_transcript MGP_CBAJ_T0037851.1 MGP_CBAJ_G0020662.1 mouse_genomes_project 13 127362346 127365120 - Isl1 protein_coding retained_intron MGP_CBAJ_T0037467.1 MGP_CBAJ_G0020538.1 mouse_genomes_project 13 103182008 103192744 + MGP_CBAJ_P0037467 Otp protein_coding protein_coding MGP_CBAJ_T0037468.1 MGP_CBAJ_G0020538.1 mouse_genomes_project 13 103189006 103189926 + Otp protein_coding processed_transcript MGP_CBAJ_T0003376.1 MGP_CBAJ_G0003099.1 mouse_genomes_project 13 44474824 44483294 - Gm15810 antisense antisense MGP_CBAJ_T0037498.1 MGP_CBAJ_G0020548.1 mouse_genomes_project 13 104103757 104109613 + MGP_CBAJ_P0037498 F2rl2 protein_coding protein_coding MGP_CBAJ_T0035988.1 MGP_CBAJ_G0019970.1 mouse_genomes_project 13 18051978 18064388 + MGP_CBAJ_P0035988 Sfrp4 protein_coding protein_coding MGP_CBAJ_T0036081.1 MGP_CBAJ_G0020021.1 mouse_genomes_project 13 21016105 21017011 + MGP_CBAJ_P0036081 Vmn1r196 protein_coding protein_coding MGP_CBAJ_T0101630.1 MGP_CBAJ_G0039661.1 mouse_genomes_project 13 115964665 115965221 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0002548.1 MGP_CBAJ_G0002450.1 mouse_genomes_project 13 17563369 17563817 + MGP_CBAJ_P0002548 Tcrg-V5 TR_V_gene TR_V_gene MGP_CBAJ_T0002549.1 MGP_CBAJ_G0002450.1 mouse_genomes_project 13 17563524 17563817 + MGP_CBAJ_P0002549 Tcrg-V5 TR_V_gene TR_V_gene MGP_CBAJ_T0002550.1 MGP_CBAJ_G0002451.1 mouse_genomes_project 13 17629724 17630031 + MGP_CBAJ_P0002550 Tcrg-V3 TR_V_gene TR_V_gene MGP_CBAJ_T0002551.1 MGP_CBAJ_G0002451.1 mouse_genomes_project 13 17629727 17630031 + MGP_CBAJ_P0002551 Tcrg-V3 TR_V_gene TR_V_gene MGP_CBAJ_T0009796.1 MGP_CBAJ_G0007934.1 mouse_genomes_project 13 20545337 20545469 - Mir1983 miRNA miRNA MGP_CBAJ_T0035994.1 MGP_CBAJ_G0019974.1 mouse_genomes_project 13 18588963 18781652 + Elmo1 protein_coding retained_intron MGP_CBAJ_T0035995.1 MGP_CBAJ_G0019974.1 mouse_genomes_project 13 18588986 19138288 + MGP_CBAJ_P0035995 Elmo1 protein_coding protein_coding MGP_CBAJ_T0035996.1 MGP_CBAJ_G0019974.1 mouse_genomes_project 13 18609819 18864876 + Elmo1 protein_coding retained_intron MGP_CBAJ_T0035997.1 MGP_CBAJ_G0019974.1 mouse_genomes_project 13 18693854 18978259 + MGP_CBAJ_P0035997 Elmo1 protein_coding unknown_likely_coding MGP_CBAJ_T0035998.1 MGP_CBAJ_G0019974.1 mouse_genomes_project 13 18997265 19122667 + Elmo1 protein_coding retained_intron MGP_CBAJ_T0037429.1 MGP_CBAJ_G0020522.1 mouse_genomes_project 13 100635428 100726049 + MGP_CBAJ_P0037429 Serinc5 protein_coding protein_coding MGP_CBAJ_T0036062.1 MGP_CBAJ_G0020011.1 mouse_genomes_project 13 20468565 20471338 - MGP_CBAJ_P0036062 Hist1h4m protein_coding protein_coding MGP_CBAJ_T0036029.1 MGP_CBAJ_G0019987.1 mouse_genomes_project 13 20079720 20090829 + MGP_CBAJ_P0036029 protein_coding protein_coding MGP_CBAJ_T0012786.1 MGP_CBAJ_G0010898.1 mouse_genomes_project 13 97345194 97345795 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009844.1 MGP_CBAJ_G0007982.1 mouse_genomes_project 13 123672490 123672581 + Mir449a miRNA miRNA MGP_CBAJ_T0035816.1 MGP_CBAJ_G0019915.1 mouse_genomes_project 13 803404 822783 + MGP_CBAJ_P0035816 Akr1c19 protein_coding protein_coding MGP_CBAJ_T0035817.1 MGP_CBAJ_G0019915.1 mouse_genomes_project 13 808444 822782 + MGP_CBAJ_P0035817 Akr1c19 protein_coding protein_coding MGP_CBAJ_T0035818.1 MGP_CBAJ_G0019915.1 mouse_genomes_project 13 819945 823104 + Akr1c19 protein_coding processed_transcript MGP_CBAJ_T0012721.1 MGP_CBAJ_G0010833.1 mouse_genomes_project 13 21441344 21442654 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006488.1 MGP_CBAJ_G0005373.1 mouse_genomes_project 13 58147098 58153221 - lincRNA lincRNA MGP_CBAJ_T0037136.1 MGP_CBAJ_G0020432.1 mouse_genomes_project 13 73063991 73064589 + MGP_CBAJ_P0037136 BC048507 protein_coding protein_coding MGP_CBAJ_T0036876.1 MGP_CBAJ_G0020333.1 mouse_genomes_project 13 60261341 60390854 - MGP_CBAJ_P0036876 Trpc7 protein_coding protein_coding MGP_CBAJ_T0036877.1 MGP_CBAJ_G0020333.1 mouse_genomes_project 13 60261341 60390815 - MGP_CBAJ_P0036877 Trpc7 protein_coding protein_coding MGP_CBAJ_T0036878.1 MGP_CBAJ_G0020333.1 mouse_genomes_project 13 60261496 60390867 - MGP_CBAJ_P0036878 Trpc7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036879.1 MGP_CBAJ_G0020333.1 mouse_genomes_project 13 60263483 60390572 - MGP_CBAJ_P0036879 Trpc7 protein_coding protein_coding MGP_CBAJ_T0036880.1 MGP_CBAJ_G0020333.1 mouse_genomes_project 13 60263483 60390572 - MGP_CBAJ_P0036880 Trpc7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036881.1 MGP_CBAJ_G0020333.1 mouse_genomes_project 13 60263483 60390572 - MGP_CBAJ_P0036881 Trpc7 protein_coding protein_coding MGP_CBAJ_T0036882.1 MGP_CBAJ_G0020333.1 mouse_genomes_project 13 60263483 60390572 - MGP_CBAJ_P0036882 Trpc7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036883.1 MGP_CBAJ_G0020333.1 mouse_genomes_project 13 60263483 60390572 - MGP_CBAJ_P0036883 Trpc7 protein_coding protein_coding MGP_CBAJ_T0006460.1 MGP_CBAJ_G0005356.1 mouse_genomes_project 13 42869364 42880173 + Gm26877 lincRNA lincRNA MGP_CBAJ_T0000850.1 MGP_CBAJ_G0000785.1 mouse_genomes_project 13 74409186 74410704 + TEC TEC MGP_CBAJ_T0006418.1 MGP_CBAJ_G0005325.1 mouse_genomes_project 13 11087173 11211075 - lincRNA lincRNA MGP_CBAJ_T0037233.1 MGP_CBAJ_G0020474.1 mouse_genomes_project 13 80664110 80796209 - MGP_CBAJ_P0037233 protein_coding protein_coding MGP_CBAJ_T0036077.1 MGP_CBAJ_G0020017.1 mouse_genomes_project 13 20878870 20879767 - MGP_CBAJ_P0036077 Vmn1r191 protein_coding protein_coding MGP_CBAJ_T0037820.1 MGP_CBAJ_G0020648.1 mouse_genomes_project 13 123677722 123681442 - MGP_CBAJ_P0037820 Gpx8 protein_coding protein_coding MGP_CBAJ_T0003412.1 MGP_CBAJ_G0003119.1 mouse_genomes_project 13 99646843 99684032 - 4833422C13Rik antisense antisense MGP_CBAJ_T0003413.1 MGP_CBAJ_G0003119.1 mouse_genomes_project 13 99653168 99683936 - 4833422C13Rik antisense antisense MGP_CBAJ_T0003414.1 MGP_CBAJ_G0003119.1 mouse_genomes_project 13 99658590 99683988 - 4833422C13Rik antisense antisense MGP_CBAJ_T0006472.1 MGP_CBAJ_G0005364.1 mouse_genomes_project 13 50611561 50613032 - A330048O09Rik lincRNA lincRNA MGP_CBAJ_T0100046.1 MGP_CBAJ_G0038301.1 mouse_genomes_project 13 10053352 10053540 + Gm25804 snoRNA snoRNA MGP_CBAJ_T0006449.1 MGP_CBAJ_G0005347.1 mouse_genomes_project 13 31849671 31850873 + Gm11378 lincRNA lincRNA MGP_CBAJ_T0035953.1 MGP_CBAJ_G0019957.1 mouse_genomes_project 13 12581176 12598673 + MGP_CBAJ_P0035953 Psma2 protein_coding protein_coding MGP_CBAJ_T0036345.1 MGP_CBAJ_G0020156.1 mouse_genomes_project 13 34691671 34705916 - MGP_CBAJ_P0036345 protein_coding protein_coding MGP_CBAJ_T0037212.1 MGP_CBAJ_G0020467.1 mouse_genomes_project 13 80059642 80133798 - MGP_CBAJ_P0037212 Ahrr protein_coding protein_coding MGP_CBAJ_T0037213.1 MGP_CBAJ_G0020467.1 mouse_genomes_project 13 80062052 80105524 - Ahrr protein_coding retained_intron MGP_CBAJ_T0037214.1 MGP_CBAJ_G0020467.1 mouse_genomes_project 13 80069014 80108651 - Ahrr protein_coding processed_transcript MGP_CBAJ_T0037215.1 MGP_CBAJ_G0020467.1 mouse_genomes_project 13 80070805 80109407 - Ahrr protein_coding processed_transcript MGP_CBAJ_T0100075.1 MGP_CBAJ_G0038330.1 mouse_genomes_project 13 93149666 93149726 - Gm22574 snoRNA snoRNA MGP_CBAJ_T0036045.1 MGP_CBAJ_G0019998.1 mouse_genomes_project 13 20318169 20323653 + MGP_CBAJ_P0036045 protein_coding protein_coding MGP_CBAJ_T0036046.1 MGP_CBAJ_G0019998.1 mouse_genomes_project 13 20322673 20323674 + MGP_CBAJ_P0036046 protein_coding protein_coding MGP_CBAJ_T0037830.1 MGP_CBAJ_G0020654.1 mouse_genomes_project 13 124353257 124354038 - MGP_CBAJ_P0037830 Hspb3 protein_coding protein_coding MGP_CBAJ_T0036051.1 MGP_CBAJ_G0020003.1 mouse_genomes_project 13 20359635 20362352 + MGP_CBAJ_P0036051 Hist1h4j protein_coding protein_coding MGP_CBAJ_T0006538.1 MGP_CBAJ_G0005409.1 mouse_genomes_project 13 110903035 110903651 - Gm29341 lincRNA lincRNA MGP_CBAJ_T0036797.1 MGP_CBAJ_G0020302.1 mouse_genomes_project 13 58664778 58679982 + MGP_CBAJ_P0036797 Rgs14 protein_coding protein_coding MGP_CBAJ_T0036798.1 MGP_CBAJ_G0020302.1 mouse_genomes_project 13 58664817 58674737 + MGP_CBAJ_P0036798 Rgs14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036799.1 MGP_CBAJ_G0020302.1 mouse_genomes_project 13 58674460 58679981 + Rgs14 protein_coding retained_intron MGP_CBAJ_T0036286.1 MGP_CBAJ_G0020132.1 mouse_genomes_project 13 32065672 32069625 + MGP_CBAJ_P0036286 Foxc1 protein_coding protein_coding MGP_CBAJ_T0036786.1 MGP_CBAJ_G0020295.1 mouse_genomes_project 13 58381545 58382132 - MGP_CBAJ_P0036786 Gm17617 protein_coding protein_coding MGP_CBAJ_T0036650.1 MGP_CBAJ_G0020267.1 mouse_genomes_project 13 55749281 55854164 - MGP_CBAJ_P0036650 Auh protein_coding protein_coding MGP_CBAJ_T0036651.1 MGP_CBAJ_G0020267.1 mouse_genomes_project 13 55749281 55841120 - MGP_CBAJ_P0036651 Auh protein_coding nonsense_mediated_decay MGP_CBAJ_T0036652.1 MGP_CBAJ_G0020267.1 mouse_genomes_project 13 55755019 55853961 - MGP_CBAJ_P0036652 Auh protein_coding protein_coding MGP_CBAJ_T0036653.1 MGP_CBAJ_G0020267.1 mouse_genomes_project 13 55800438 55854151 - Auh protein_coding retained_intron MGP_CBAJ_T0036654.1 MGP_CBAJ_G0020267.1 mouse_genomes_project 13 55809842 55854155 - MGP_CBAJ_P0036654 Auh protein_coding protein_coding MGP_CBAJ_T0036655.1 MGP_CBAJ_G0020267.1 mouse_genomes_project 13 55810618 55848402 - Auh protein_coding processed_transcript MGP_CBAJ_T0036656.1 MGP_CBAJ_G0020267.1 mouse_genomes_project 13 55825673 55854157 - MGP_CBAJ_P0036656 Auh protein_coding protein_coding MGP_CBAJ_T0036657.1 MGP_CBAJ_G0020267.1 mouse_genomes_project 13 55827523 55848381 - Auh protein_coding processed_transcript MGP_CBAJ_T0036658.1 MGP_CBAJ_G0020267.1 mouse_genomes_project 13 55827534 55841156 - Auh protein_coding processed_transcript MGP_CBAJ_T0036659.1 MGP_CBAJ_G0020267.1 mouse_genomes_project 13 55828838 55854184 - MGP_CBAJ_P0036659 Auh protein_coding protein_coding MGP_CBAJ_T0036660.1 MGP_CBAJ_G0020267.1 mouse_genomes_project 13 55831467 55848405 - Auh protein_coding processed_transcript MGP_CBAJ_T0036661.1 MGP_CBAJ_G0020267.1 mouse_genomes_project 13 55840663 55848397 - Auh protein_coding retained_intron MGP_CBAJ_T0036662.1 MGP_CBAJ_G0020267.1 mouse_genomes_project 13 55852990 55854155 - Auh protein_coding processed_transcript MGP_CBAJ_T0009795.1 MGP_CBAJ_G0007933.1 mouse_genomes_project 13 20472234 22822467 + miRNA miRNA MGP_CBAJ_T0017099.1 MGP_CBAJ_G0014993.1 mouse_genomes_project 13 35326503 35340343 + Gm15908 processed_transcript processed_transcript MGP_CBAJ_T0037505.1 MGP_CBAJ_G0020552.1 mouse_genomes_project 13 104894955 104922058 - Ankdd1b protein_coding processed_transcript MGP_CBAJ_T0037506.1 MGP_CBAJ_G0020552.1 mouse_genomes_project 13 104895259 104976560 - MGP_CBAJ_P0037506 Ankdd1b protein_coding protein_coding MGP_CBAJ_T0037507.1 MGP_CBAJ_G0020552.1 mouse_genomes_project 13 104895570 104921417 - Ankdd1b protein_coding retained_intron MGP_CBAJ_T0037508.1 MGP_CBAJ_G0020552.1 mouse_genomes_project 13 104895908 104921383 - MGP_CBAJ_P0037508 Ankdd1b protein_coding protein_coding MGP_CBAJ_T0037509.1 MGP_CBAJ_G0020552.1 mouse_genomes_project 13 104921374 104936260 - Ankdd1b protein_coding retained_intron MGP_CBAJ_T0037510.1 MGP_CBAJ_G0020552.1 mouse_genomes_project 13 104934582 104976598 - MGP_CBAJ_P0037510 Ankdd1b protein_coding protein_coding MGP_CBAJ_T0035808.1 MGP_CBAJ_G0019911.1 mouse_genomes_project 13 502459 507095 - MGP_CBAJ_P0035808 Ucn3 protein_coding protein_coding MGP_CBAJ_T0036407.1 MGP_CBAJ_G0020180.1 mouse_genomes_project 13 39254612 39319839 + MGP_CBAJ_P0036407 Dsp protein_coding protein_coding MGP_CBAJ_T0036408.1 MGP_CBAJ_G0020180.1 mouse_genomes_project 13 39254632 39319839 + MGP_CBAJ_P0036408 Dsp protein_coding protein_coding MGP_CBAJ_T0036409.1 MGP_CBAJ_G0020180.1 mouse_genomes_project 13 39295100 39298967 + Dsp protein_coding processed_transcript MGP_CBAJ_T0037810.1 MGP_CBAJ_G0020642.1 mouse_genomes_project 13 123482988 123545734 - MGP_CBAJ_P0037810 Skiv2l2 protein_coding protein_coding MGP_CBAJ_T0036300.1 MGP_CBAJ_G0020138.1 mouse_genomes_project 13 33301303 33313965 - MGP_CBAJ_P0036300 Serpinb1c protein_coding protein_coding MGP_CBAJ_T0036301.1 MGP_CBAJ_G0020138.1 mouse_genomes_project 13 33303477 33313942 - MGP_CBAJ_P0036301 Serpinb1c protein_coding protein_coding MGP_CBAJ_T0012743.1 MGP_CBAJ_G0010855.1 mouse_genomes_project 13 29079540 29080049 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0037605.1 MGP_CBAJ_G0020587.1 mouse_genomes_project 13 109579976 109613824 - MGP_CBAJ_P0037605 Gtf2h2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037606.1 MGP_CBAJ_G0020587.1 mouse_genomes_project 13 109580165 109614026 - MGP_CBAJ_P0037606 Gtf2h2 protein_coding unknown_likely_coding MGP_CBAJ_T0037607.1 MGP_CBAJ_G0020587.1 mouse_genomes_project 13 109588345 109614047 - MGP_CBAJ_P0037607 Gtf2h2 protein_coding protein_coding MGP_CBAJ_T0037608.1 MGP_CBAJ_G0020587.1 mouse_genomes_project 13 109588575 109613853 - Gtf2h2 protein_coding retained_intron MGP_CBAJ_T0037609.1 MGP_CBAJ_G0020587.1 mouse_genomes_project 13 109588575 109614065 - MGP_CBAJ_P0037609 Gtf2h2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037610.1 MGP_CBAJ_G0020587.1 mouse_genomes_project 13 109598559 109602174 - Gtf2h2 protein_coding processed_transcript MGP_CBAJ_T0037611.1 MGP_CBAJ_G0020587.1 mouse_genomes_project 13 109600648 109603092 - Gtf2h2 protein_coding processed_transcript MGP_CBAJ_T0037612.1 MGP_CBAJ_G0020587.1 mouse_genomes_project 13 109602971 109614065 - MGP_CBAJ_P0037612 Gtf2h2 protein_coding protein_coding MGP_CBAJ_T0037613.1 MGP_CBAJ_G0020587.1 mouse_genomes_project 13 109609176 109613860 - Gtf2h2 protein_coding retained_intron MGP_CBAJ_T0037614.1 MGP_CBAJ_G0020587.1 mouse_genomes_project 13 109610268 109614039 - Gtf2h2 protein_coding processed_transcript MGP_CBAJ_T0101591.1 MGP_CBAJ_G0039622.1 mouse_genomes_project 13 21170352 21171245 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0012778.1 MGP_CBAJ_G0010890.1 mouse_genomes_project 13 83119530 83120199 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011224.1 MGP_CBAJ_G0009362.1 mouse_genomes_project 13 40132850 40133078 - Gm22035 misc_RNA misc_RNA MGP_CBAJ_T0017112.1 MGP_CBAJ_G0015002.1 mouse_genomes_project 13 122254733 122255371 + processed_transcript processed_transcript MGP_CBAJ_T0036274.1 MGP_CBAJ_G0020124.1 mouse_genomes_project 13 30773563 30826699 + MGP_CBAJ_P0036274 Dusp22 protein_coding protein_coding MGP_CBAJ_T0036275.1 MGP_CBAJ_G0020124.1 mouse_genomes_project 13 30773625 30821592 + MGP_CBAJ_P0036275 Dusp22 protein_coding protein_coding MGP_CBAJ_T0036276.1 MGP_CBAJ_G0020124.1 mouse_genomes_project 13 30773674 30824363 + MGP_CBAJ_P0036276 Dusp22 protein_coding protein_coding MGP_CBAJ_T0036026.1 MGP_CBAJ_G0019985.1 mouse_genomes_project 13 20039573 20053448 - MGP_CBAJ_P0036026 Zscan26 protein_coding protein_coding MGP_CBAJ_T0036027.1 MGP_CBAJ_G0019985.1 mouse_genomes_project 13 20041911 20053451 - MGP_CBAJ_P0036027 Zscan26 protein_coding protein_coding MGP_CBAJ_T0037463.1 MGP_CBAJ_G0020535.1 mouse_genomes_project 13 102608447 102613769 - MGP_CBAJ_P0037463 Gm9776 protein_coding protein_coding MGP_CBAJ_T0037634.1 MGP_CBAJ_G0020596.1 mouse_genomes_project 13 109935920 109955956 - MGP_CBAJ_P0037634 Cenph protein_coding protein_coding MGP_CBAJ_T0037635.1 MGP_CBAJ_G0020596.1 mouse_genomes_project 13 109952249 109955840 - Cenph protein_coding retained_intron MGP_CBAJ_T0012766.1 MGP_CBAJ_G0010878.1 mouse_genomes_project 13 72764832 72765692 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0036843.1 MGP_CBAJ_G0020318.1 mouse_genomes_project 13 59071763 59083721 + MGP_CBAJ_P0036843 Txndc15 protein_coding protein_coding MGP_CBAJ_T0036317.1 MGP_CBAJ_G0020150.1 mouse_genomes_project 13 34432372 34443386 - MGP_CBAJ_P0036317 Serpinb6e protein_coding protein_coding MGP_CBAJ_T0036318.1 MGP_CBAJ_G0020150.1 mouse_genomes_project 13 34440980 34443386 - MGP_CBAJ_P0036318 Serpinb6e protein_coding protein_coding MGP_CBAJ_T0037625.1 MGP_CBAJ_G0020592.1 mouse_genomes_project 13 109796944 109807360 + MGP_CBAJ_P0037625 Taf9 protein_coding protein_coding MGP_CBAJ_T0036141.1 MGP_CBAJ_G0020071.1 mouse_genomes_project 13 22842726 22845019 - MGP_CBAJ_P0036141 Hist1h3a protein_coding protein_coding MGP_CBAJ_T0012702.1 MGP_CBAJ_G0010814.1 mouse_genomes_project 13 823157 823448 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012776.1 MGP_CBAJ_G0010888.1 mouse_genomes_project 13 82868560 82868980 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017107.1 MGP_CBAJ_G0014999.1 mouse_genomes_project 13 97425666 97546390 + Gm4117 processed_transcript processed_transcript MGP_CBAJ_T0017108.1 MGP_CBAJ_G0014999.1 mouse_genomes_project 13 97425670 97600482 + Gm4117 processed_transcript processed_transcript MGP_CBAJ_T0012706.1 MGP_CBAJ_G0010818.1 mouse_genomes_project 13 9814838 9815277 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0037391.1 MGP_CBAJ_G0020511.1 mouse_genomes_project 13 99683671 99731301 + MGP_CBAJ_P0037391 Acot12 protein_coding protein_coding MGP_CBAJ_T0037392.1 MGP_CBAJ_G0020511.1 mouse_genomes_project 13 99683692 99705349 + Acot12 protein_coding retained_intron MGP_CBAJ_T0037393.1 MGP_CBAJ_G0020511.1 mouse_genomes_project 13 99724490 99730057 + Acot12 protein_coding processed_transcript MGP_CBAJ_T0037079.1 MGP_CBAJ_G0020400.1 mouse_genomes_project 13 71836090 71904010 + MGP_CBAJ_P0037079 Ptdss1 protein_coding protein_coding MGP_CBAJ_T0012792.1 MGP_CBAJ_G0010904.1 mouse_genomes_project 13 112900549 112901032 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101589.1 MGP_CBAJ_G0039620.1 mouse_genomes_project 13 21021524 21022391 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0101602.1 MGP_CBAJ_G0039633.1 mouse_genomes_project 13 21778812 21779687 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0017085.1 MGP_CBAJ_G0014985.1 mouse_genomes_project 13 20037871 20043312 + 4930470G03Rik processed_transcript processed_transcript MGP_CBAJ_T0035951.1 MGP_CBAJ_G0019955.1 mouse_genomes_project 13 12152308 12370048 - MGP_CBAJ_P0035951 Hecw1 protein_coding protein_coding MGP_CBAJ_T0036254.1 MGP_CBAJ_G0020118.1 mouse_genomes_project 13 28882336 28887130 - MGP_CBAJ_P0036254 Sox4 protein_coding protein_coding MGP_CBAJ_T0037825.1 MGP_CBAJ_G0020651.1 mouse_genomes_project 13 123841170 123849584 + MGP_CBAJ_P0037825 Esm1 protein_coding protein_coding MGP_CBAJ_T0009834.1 MGP_CBAJ_G0007972.1 mouse_genomes_project 13 101966894 101966955 + Mir5624 miRNA miRNA MGP_CBAJ_T0012732.1 MGP_CBAJ_G0010844.1 mouse_genomes_project 13 24696260 24696968 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0037746.1 MGP_CBAJ_G0020626.1 mouse_genomes_project 13 118228644 118311709 + MGP_CBAJ_P0037746 Elovl7 protein_coding protein_coding MGP_CBAJ_T0003365.1 MGP_CBAJ_G0003090.1 mouse_genomes_project 13 23046033 23055408 + Gm11339 antisense antisense MGP_CBAJ_T0037461.1 MGP_CBAJ_G0020534.1 mouse_genomes_project 13 102447292 102537356 - MGP_CBAJ_P0037461 Scamp1 protein_coding protein_coding MGP_CBAJ_T0037462.1 MGP_CBAJ_G0020534.1 mouse_genomes_project 13 102468475 102512441 - MGP_CBAJ_P0037462 Scamp1 protein_coding protein_coding MGP_CBAJ_T0012787.1 MGP_CBAJ_G0010899.1 mouse_genomes_project 13 100287016 100287265 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0036859.1 MGP_CBAJ_G0020324.1 mouse_genomes_project 13 59671486 59673128 - MGP_CBAJ_P0036859 Neurog1 protein_coding protein_coding MGP_CBAJ_T0037200.1 MGP_CBAJ_G0020460.1 mouse_genomes_project 13 79751660 79774632 + MGP_CBAJ_P0037200 Brd9 protein_coding protein_coding MGP_CBAJ_T0037201.1 MGP_CBAJ_G0020460.1 mouse_genomes_project 13 79751716 79774630 + MGP_CBAJ_P0037201 Brd9 protein_coding unknown_likely_coding MGP_CBAJ_T0036892.1 MGP_CBAJ_G0020336.1 mouse_genomes_project 13 61767729 61781383 - MGP_CBAJ_P0036892 Hnrnpa0 protein_coding protein_coding MGP_CBAJ_T0012753.1 MGP_CBAJ_G0010865.1 mouse_genomes_project 13 35652887 35653873 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0037123.1 MGP_CBAJ_G0020425.1 mouse_genomes_project 13 72825266 72845836 - MGP_CBAJ_P0037123 Zfp65 protein_coding protein_coding MGP_CBAJ_T0037124.1 MGP_CBAJ_G0020425.1 mouse_genomes_project 13 72827766 72845870 - MGP_CBAJ_P0037124 Zfp65 protein_coding protein_coding MGP_CBAJ_T0037419.1 MGP_CBAJ_G0020517.1 mouse_genomes_project 13 100344328 100381226 + MGP_CBAJ_P0037419 Dhfr protein_coding protein_coding MGP_CBAJ_T0036791.1 MGP_CBAJ_G0020298.1 mouse_genomes_project 13 58601328 58604086 - MGP_CBAJ_P0036791 Rab24 protein_coding protein_coding MGP_CBAJ_T0012716.1 MGP_CBAJ_G0010828.1 mouse_genomes_project 13 20610988 20612403 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012779.1 MGP_CBAJ_G0010891.1 mouse_genomes_project 13 84692085 84694248 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017110.1 MGP_CBAJ_G0015001.1 mouse_genomes_project 13 122014063 122089337 + Gm15286 processed_transcript processed_transcript MGP_CBAJ_T0017111.1 MGP_CBAJ_G0015001.1 mouse_genomes_project 13 122058326 122087342 + Gm15286 processed_transcript processed_transcript MGP_CBAJ_T0036113.1 MGP_CBAJ_G0020047.1 mouse_genomes_project 13 22549118 22549591 + MGP_CBAJ_P0036113 Hist1h4h protein_coding protein_coding MGP_CBAJ_T0098804.1 MGP_CBAJ_G0037059.1 mouse_genomes_project 13 43476733 43476837 + Gm22157 snRNA snRNA MGP_CBAJ_T0101596.1 MGP_CBAJ_G0039627.1 mouse_genomes_project 13 21382627 21383352 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0037701.1 MGP_CBAJ_G0020612.1 mouse_genomes_project 13 114388794 114441634 + Srek1ip1 protein_coding processed_transcript MGP_CBAJ_T0037704.1 MGP_CBAJ_G0020612.1 mouse_genomes_project 13 114415599 114442548 + MGP_CBAJ_P0037704 Srek1ip1 protein_coding protein_coding MGP_CBAJ_T0037705.1 MGP_CBAJ_G0020612.1 mouse_genomes_project 13 114415661 114441943 + MGP_CBAJ_P0037705 Srek1ip1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037706.1 MGP_CBAJ_G0020612.1 mouse_genomes_project 13 114427102 114437491 + Srek1ip1 protein_coding retained_intron MGP_CBAJ_T0037707.1 MGP_CBAJ_G0020612.1 mouse_genomes_project 13 114437267 114442545 + Srek1ip1 protein_coding retained_intron MGP_CBAJ_T0035973.1 MGP_CBAJ_G0019966.1 mouse_genomes_project 13 17078651 17238825 + MGP_CBAJ_P0035973 Vps41 protein_coding protein_coding MGP_CBAJ_T0036217.1 MGP_CBAJ_G0020096.1 mouse_genomes_project 13 26553780 26590545 + MGP_CBAJ_P0036217 protein_coding protein_coding MGP_CBAJ_T0012740.1 MGP_CBAJ_G0010852.1 mouse_genomes_project 13 26873413 26874367 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009797.1 MGP_CBAJ_G0007935.1 mouse_genomes_project 13 20575677 20575766 - Gm44456 miRNA miRNA MGP_CBAJ_T0037813.1 MGP_CBAJ_G0020645.1 mouse_genomes_project 13 123617677 123624209 + MGP_CBAJ_P0037813 Mcidas protein_coding protein_coding MGP_CBAJ_T0036478.1 MGP_CBAJ_G0020211.1 mouse_genomes_project 13 45284313 45304183 - MGP_CBAJ_P0036478 Mcur1 protein_coding protein_coding MGP_CBAJ_T0036593.1 MGP_CBAJ_G0020252.1 mouse_genomes_project 13 52205767 52255431 + MGP_CBAJ_P0036593 Iars protein_coding protein_coding MGP_CBAJ_T0036594.1 MGP_CBAJ_G0020252.1 mouse_genomes_project 13 52205797 52255431 + MGP_CBAJ_P0036594 Iars protein_coding protein_coding MGP_CBAJ_T0036595.1 MGP_CBAJ_G0020252.1 mouse_genomes_project 13 52205858 52211973 + MGP_CBAJ_P0036595 Iars protein_coding protein_coding MGP_CBAJ_T0036596.1 MGP_CBAJ_G0020252.1 mouse_genomes_project 13 52211052 52254905 + MGP_CBAJ_P0036596 Iars protein_coding protein_coding MGP_CBAJ_T0036597.1 MGP_CBAJ_G0020252.1 mouse_genomes_project 13 52227004 52232967 + MGP_CBAJ_P0036597 Iars protein_coding nonsense_mediated_decay MGP_CBAJ_T0036598.1 MGP_CBAJ_G0020252.1 mouse_genomes_project 13 52227755 52236966 + Iars protein_coding retained_intron MGP_CBAJ_T0036599.1 MGP_CBAJ_G0020252.1 mouse_genomes_project 13 52229414 52236340 + Iars protein_coding retained_intron MGP_CBAJ_T0036600.1 MGP_CBAJ_G0020252.1 mouse_genomes_project 13 52239039 52244298 + Iars protein_coding retained_intron MGP_CBAJ_T0036601.1 MGP_CBAJ_G0020252.1 mouse_genomes_project 13 52243302 52244280 + Iars protein_coding retained_intron MGP_CBAJ_T0009824.1 MGP_CBAJ_G0007962.1 mouse_genomes_project 13 67842047 67842121 + Mir23b miRNA miRNA MGP_CBAJ_T0037061.1 MGP_CBAJ_G0020395.1 mouse_genomes_project 13 69891375 69913644 - MGP_CBAJ_P0037061 Nlrp4f protein_coding protein_coding MGP_CBAJ_T0036697.1 MGP_CBAJ_G0020281.1 mouse_genomes_project 13 57758031 57764024 - MGP_CBAJ_P0036697 Nop16 protein_coding protein_coding MGP_CBAJ_T0036698.1 MGP_CBAJ_G0020281.1 mouse_genomes_project 13 57758382 57763992 - MGP_CBAJ_P0036698 Nop16 protein_coding protein_coding MGP_CBAJ_T0036699.1 MGP_CBAJ_G0020281.1 mouse_genomes_project 13 57759085 57763910 - MGP_CBAJ_P0036699 Nop16 protein_coding nonsense_mediated_decay MGP_CBAJ_T0003421.1 MGP_CBAJ_G0003124.1 mouse_genomes_project 13 103552288 103552688 + antisense antisense MGP_CBAJ_T0037105.1 MGP_CBAJ_G0020418.1 mouse_genomes_project 13 72523747 72534066 - MGP_CBAJ_P0037105 Zfp58 protein_coding protein_coding MGP_CBAJ_T0037106.1 MGP_CBAJ_G0020418.1 mouse_genomes_project 13 72523748 72534118 - MGP_CBAJ_P0037106 Zfp58 protein_coding protein_coding MGP_CBAJ_T0037108.1 MGP_CBAJ_G0020418.1 mouse_genomes_project 13 72525232 72534050 - MGP_CBAJ_P0037108 Zfp58 protein_coding protein_coding MGP_CBAJ_T0037109.1 MGP_CBAJ_G0020418.1 mouse_genomes_project 13 72525447 72534007 - MGP_CBAJ_P0037109 Zfp58 protein_coding protein_coding MGP_CBAJ_T0006500.1 MGP_CBAJ_G0005382.1 mouse_genomes_project 13 75297157 75303306 - lincRNA lincRNA MGP_CBAJ_T0037626.1 MGP_CBAJ_G0020593.1 mouse_genomes_project 13 109826016 109857230 + MGP_CBAJ_P0037626 Ccdc125 protein_coding protein_coding MGP_CBAJ_T0101616.1 MGP_CBAJ_G0039647.1 mouse_genomes_project 13 33271654 33274866 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0100058.1 MGP_CBAJ_G0038313.1 mouse_genomes_project 13 50944421 50944553 - Gm25232 snoRNA snoRNA MGP_CBAJ_T0037529.1 MGP_CBAJ_G0020558.1 mouse_genomes_project 13 105631324 105643289 - MGP_CBAJ_P0037529 1700029F12Rik protein_coding protein_coding MGP_CBAJ_T0101598.1 MGP_CBAJ_G0039629.1 mouse_genomes_project 13 21520401 21521507 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0017088.1 MGP_CBAJ_G0014988.1 mouse_genomes_project 13 22275881 22349121 + 4930586N03Rik processed_transcript processed_transcript MGP_CBAJ_T0035952.1 MGP_CBAJ_G0019956.1 mouse_genomes_project 13 12578243 12580972 - MGP_CBAJ_P0035952 Mrpl32 protein_coding protein_coding MGP_CBAJ_T0037038.1 MGP_CBAJ_G0020381.1 mouse_genomes_project 13 68769076 68789379 - MGP_CBAJ_P0037038 Zfp367 protein_coding protein_coding MGP_CBAJ_T0037039.1 MGP_CBAJ_G0020381.1 mouse_genomes_project 13 68771460 68788606 - Zfp367 protein_coding processed_transcript MGP_CBAJ_T0037040.1 MGP_CBAJ_G0020381.1 mouse_genomes_project 13 68771587 68786391 - Zfp367 protein_coding processed_transcript MGP_CBAJ_T0037041.1 MGP_CBAJ_G0020381.1 mouse_genomes_project 13 68776531 68789379 - MGP_CBAJ_P0037041 Zfp367 protein_coding protein_coding MGP_CBAJ_T0037811.1 MGP_CBAJ_G0020643.1 mouse_genomes_project 13 123546083 123590249 + MGP_CBAJ_P0037811 Dhx29 protein_coding protein_coding MGP_CBAJ_T0037695.1 MGP_CBAJ_G0020609.1 mouse_genomes_project 13 113768210 113787550 + MGP_CBAJ_P0037695 Cenpk protein_coding protein_coding MGP_CBAJ_T0037696.1 MGP_CBAJ_G0020609.1 mouse_genomes_project 13 113768643 113790598 + MGP_CBAJ_P0037696 Cenpk protein_coding protein_coding MGP_CBAJ_T0100040.1 MGP_CBAJ_G0038295.1 mouse_genomes_project 13 1845172 1845304 - Gm24790 snoRNA snoRNA MGP_CBAJ_T0035805.1 MGP_CBAJ_G0019909.1 mouse_genomes_project 13 441081 477881 - MGP_CBAJ_P0035805 Net1 protein_coding protein_coding MGP_CBAJ_T0035806.1 MGP_CBAJ_G0019909.1 mouse_genomes_project 13 441081 453008 - MGP_CBAJ_P0035806 Net1 protein_coding protein_coding MGP_CBAJ_T0036336.1 MGP_CBAJ_G0020153.1 mouse_genomes_project 13 34577524 34604108 + MGP_CBAJ_P0036336 Nqo2 protein_coding protein_coding MGP_CBAJ_T0036337.1 MGP_CBAJ_G0020153.1 mouse_genomes_project 13 34577524 34604108 + MGP_CBAJ_P0036337 Nqo2 protein_coding protein_coding MGP_CBAJ_T0006456.1 MGP_CBAJ_G0005352.1 mouse_genomes_project 13 38471390 38472387 - Gm29458 lincRNA lincRNA MGP_CBAJ_T0037497.1 MGP_CBAJ_G0020547.1 mouse_genomes_project 13 104031784 104312900 - MGP_CBAJ_P0037497 Iqgap2 protein_coding protein_coding MGP_CBAJ_T0037404.1 MGP_CBAJ_G0020515.1 mouse_genomes_project 13 100182292 100344541 - MGP_CBAJ_P0037404 Msh3 protein_coding protein_coding MGP_CBAJ_T0037405.1 MGP_CBAJ_G0020515.1 mouse_genomes_project 13 100182300 100212735 - Msh3 protein_coding processed_transcript MGP_CBAJ_T0037406.1 MGP_CBAJ_G0020515.1 mouse_genomes_project 13 100182301 100240720 - Msh3 protein_coding retained_intron MGP_CBAJ_T0037407.1 MGP_CBAJ_G0020515.1 mouse_genomes_project 13 100182302 100344545 - MGP_CBAJ_P0037407 Msh3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037408.1 MGP_CBAJ_G0020515.1 mouse_genomes_project 13 100182306 100224627 - Msh3 protein_coding retained_intron MGP_CBAJ_T0037409.1 MGP_CBAJ_G0020515.1 mouse_genomes_project 13 100182306 100344549 - MGP_CBAJ_P0037409 Msh3 protein_coding protein_coding MGP_CBAJ_T0037410.1 MGP_CBAJ_G0020515.1 mouse_genomes_project 13 100182677 100207205 - MGP_CBAJ_P0037410 Msh3 protein_coding protein_coding MGP_CBAJ_T0037411.1 MGP_CBAJ_G0020515.1 mouse_genomes_project 13 100224407 100344531 - MGP_CBAJ_P0037411 Msh3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037413.1 MGP_CBAJ_G0020515.1 mouse_genomes_project 13 100288602 100290563 - Msh3 protein_coding retained_intron MGP_CBAJ_T0037414.1 MGP_CBAJ_G0020515.1 mouse_genomes_project 13 100290285 100344542 - MGP_CBAJ_P0037414 Msh3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037415.1 MGP_CBAJ_G0020515.1 mouse_genomes_project 13 100293836 100335254 - Msh3 protein_coding retained_intron MGP_CBAJ_T0037416.1 MGP_CBAJ_G0020515.1 mouse_genomes_project 13 100330547 100344061 - Msh3 protein_coding processed_transcript MGP_CBAJ_T0037417.1 MGP_CBAJ_G0020515.1 mouse_genomes_project 13 100335744 100344499 - Msh3 protein_coding retained_intron MGP_CBAJ_T0037418.1 MGP_CBAJ_G0020515.1 mouse_genomes_project 13 100340665 100344531 - MGP_CBAJ_P0037418 Msh3 protein_coding protein_coding MGP_CBAJ_T0036095.1 MGP_CBAJ_G0020035.1 mouse_genomes_project 13 21883365 21884469 + MGP_CBAJ_P0036095 Vmn1r214 protein_coding protein_coding MGP_CBAJ_T0000864.1 MGP_CBAJ_G0000799.1 mouse_genomes_project 13 111069606 111071775 - TEC TEC MGP_CBAJ_T0036864.1 MGP_CBAJ_G0020329.1 mouse_genomes_project 13 59996600 60001590 + MGP_CBAJ_P0036864 Fbxl21 protein_coding protein_coding MGP_CBAJ_T0036865.1 MGP_CBAJ_G0020329.1 mouse_genomes_project 13 59996619 60012040 + MGP_CBAJ_P0036865 Fbxl21 protein_coding protein_coding MGP_CBAJ_T0036866.1 MGP_CBAJ_G0020329.1 mouse_genomes_project 13 59996636 60011928 + MGP_CBAJ_P0036866 Fbxl21 protein_coding protein_coding MGP_CBAJ_T0036867.1 MGP_CBAJ_G0020329.1 mouse_genomes_project 13 59996641 60004219 + MGP_CBAJ_P0036867 Fbxl21 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037581.1 MGP_CBAJ_G0020581.1 mouse_genomes_project 13 108960768 109042318 - MGP_CBAJ_P0037581 Mccc2 protein_coding protein_coding MGP_CBAJ_T0100061.1 MGP_CBAJ_G0038316.1 mouse_genomes_project 13 54470376 54470512 + Gm22806 snoRNA snoRNA MGP_CBAJ_T0037155.1 MGP_CBAJ_G0020441.1 mouse_genomes_project 13 75297125 75303306 + MGP_CBAJ_P0037155 Med10 protein_coding protein_coding MGP_CBAJ_T0036271.1 MGP_CBAJ_G0020122.1 mouse_genomes_project 13 30436715 30446166 + Agtr1a protein_coding processed_transcript MGP_CBAJ_T0036272.1 MGP_CBAJ_G0020122.1 mouse_genomes_project 13 30436715 30480577 + MGP_CBAJ_P0036272 Agtr1a protein_coding protein_coding MGP_CBAJ_T0036828.1 MGP_CBAJ_G0020310.1 mouse_genomes_project 13 58848042 58853383 - MGP_CBAJ_P0036828 Dok3 protein_coding protein_coding MGP_CBAJ_T0003371.1 MGP_CBAJ_G0003095.1 mouse_genomes_project 13 34543736 34546352 + 1110046J04Rik antisense antisense MGP_CBAJ_T0003372.1 MGP_CBAJ_G0003095.1 mouse_genomes_project 13 34544200 34571561 + 1110046J04Rik antisense antisense MGP_CBAJ_T0035804.1 MGP_CBAJ_G0019908.1 mouse_genomes_project 13 395842 404703 + MGP_CBAJ_P0035804 Calm5 protein_coding protein_coding MGP_CBAJ_T0100080.1 MGP_CBAJ_G0038335.1 mouse_genomes_project 13 108657125 108657256 - Gm24471 snoRNA snoRNA MGP_CBAJ_T0037104.1 MGP_CBAJ_G0020417.1 mouse_genomes_project 13 72500716 72513091 - MGP_CBAJ_P0037104 protein_coding protein_coding MGP_CBAJ_T0101588.1 MGP_CBAJ_G0039619.1 mouse_genomes_project 13 20875004 20875769 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0011218.1 MGP_CBAJ_G0009356.1 mouse_genomes_project 13 6787456 6787704 - Gm23496 misc_RNA misc_RNA MGP_CBAJ_T0036388.1 MGP_CBAJ_G0020175.1 mouse_genomes_project 13 38358327 38431878 + MGP_CBAJ_P0036388 Ly86 protein_coding protein_coding MGP_CBAJ_T0036242.1 MGP_CBAJ_G0020110.1 mouse_genomes_project 13 27272246 27281295 - MGP_CBAJ_P0036242 Prl7a2 protein_coding protein_coding MGP_CBAJ_T0100070.1 MGP_CBAJ_G0038325.1 mouse_genomes_project 13 82085703 82085834 - Gm23319 snoRNA snoRNA MGP_CBAJ_T0036664.1 MGP_CBAJ_G0020269.1 mouse_genomes_project 13 56069127 56277474 - MGP_CBAJ_P0036664 Ror2 protein_coding protein_coding MGP_CBAJ_T0036665.1 MGP_CBAJ_G0020269.1 mouse_genomes_project 13 56069132 56278049 - MGP_CBAJ_P0036665 Ror2 protein_coding protein_coding MGP_CBAJ_T0036435.1 MGP_CBAJ_G0020193.1 mouse_genomes_project 13 42511044 42563878 - MGP_CBAJ_P0036435 Mak protein_coding protein_coding MGP_CBAJ_T0036436.1 MGP_CBAJ_G0020193.1 mouse_genomes_project 13 42511044 42554638 - MGP_CBAJ_P0036436 Mak protein_coding protein_coding MGP_CBAJ_T0036437.1 MGP_CBAJ_G0020193.1 mouse_genomes_project 13 42511044 42563878 - MGP_CBAJ_P0036437 Mak protein_coding protein_coding MGP_CBAJ_T0012756.1 MGP_CBAJ_G0010868.1 mouse_genomes_project 13 47107661 47108664 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006499.1 MGP_CBAJ_G0005381.1 mouse_genomes_project 13 74539063 74545546 + lincRNA lincRNA MGP_CBAJ_T0100077.1 MGP_CBAJ_G0038332.1 mouse_genomes_project 13 99669881 99670009 + Gm22778 snoRNA snoRNA MGP_CBAJ_T0100049.1 MGP_CBAJ_G0038304.1 mouse_genomes_project 13 23421084 23421207 - Gm23340 snoRNA snoRNA MGP_CBAJ_T0037347.1 MGP_CBAJ_G0020500.1 mouse_genomes_project 13 93149496 93151126 - MGP_CBAJ_P0037347 Cox7c protein_coding protein_coding MGP_CBAJ_T0037348.1 MGP_CBAJ_G0020500.1 mouse_genomes_project 13 93149496 93152455 - MGP_CBAJ_P0037348 Cox7c protein_coding protein_coding MGP_CBAJ_T0037349.1 MGP_CBAJ_G0020500.1 mouse_genomes_project 13 93149501 93151013 - MGP_CBAJ_P0037349 Cox7c protein_coding protein_coding MGP_CBAJ_T0037350.1 MGP_CBAJ_G0020500.1 mouse_genomes_project 13 93149575 93152325 - Cox7c protein_coding processed_transcript MGP_CBAJ_T0000846.1 MGP_CBAJ_G0000781.1 mouse_genomes_project 13 50914704 50917094 - TEC TEC MGP_CBAJ_T0037082.1 MGP_CBAJ_G0020403.1 mouse_genomes_project 13 71989733 72016769 - protein_coding processed_transcript MGP_CBAJ_T0037083.1 MGP_CBAJ_G0020403.1 mouse_genomes_project 13 71989733 72027417 - MGP_CBAJ_P0037083 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037084.1 MGP_CBAJ_G0020403.1 mouse_genomes_project 13 71989734 72016854 - MGP_CBAJ_P0037084 protein_coding protein_coding MGP_CBAJ_T0037086.1 MGP_CBAJ_G0020403.1 mouse_genomes_project 13 71994321 72016854 - protein_coding processed_transcript MGP_CBAJ_T0037088.1 MGP_CBAJ_G0020403.1 mouse_genomes_project 13 72024276 72027472 - protein_coding processed_transcript MGP_CBAJ_T0012731.1 MGP_CBAJ_G0010843.1 mouse_genomes_project 13 24338767 24339085 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0037833.1 MGP_CBAJ_G0020657.1 mouse_genomes_project 13 125199224 125206821 - MGP_CBAJ_P0037833 Fst protein_coding protein_coding MGP_CBAJ_T0037834.1 MGP_CBAJ_G0020657.1 mouse_genomes_project 13 125200385 125206677 - MGP_CBAJ_P0037834 Fst protein_coding unknown_likely_coding MGP_CBAJ_T0036063.1 MGP_CBAJ_G0020012.1 mouse_genomes_project 13 20597850 20614765 + MGP_CBAJ_P0036063 Zfp184 protein_coding protein_coding MGP_CBAJ_T0036064.1 MGP_CBAJ_G0020012.1 mouse_genomes_project 13 20597868 20615060 + MGP_CBAJ_P0036064 Zfp184 protein_coding protein_coding MGP_CBAJ_T0036065.1 MGP_CBAJ_G0020012.1 mouse_genomes_project 13 20597868 20614883 + MGP_CBAJ_P0036065 Zfp184 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036066.1 MGP_CBAJ_G0020012.1 mouse_genomes_project 13 20597893 20603086 + MGP_CBAJ_P0036066 Zfp184 protein_coding protein_coding MGP_CBAJ_T0036067.1 MGP_CBAJ_G0020012.1 mouse_genomes_project 13 20598549 20614619 + MGP_CBAJ_P0036067 Zfp184 protein_coding protein_coding MGP_CBAJ_T0036068.1 MGP_CBAJ_G0020012.1 mouse_genomes_project 13 20602150 20612991 + Zfp184 protein_coding retained_intron MGP_CBAJ_T0012788.1 MGP_CBAJ_G0010900.1 mouse_genomes_project 13 101367166 101368137 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0035963.1 MGP_CBAJ_G0019962.1 mouse_genomes_project 13 15942823 15946516 + MGP_CBAJ_P0035963 Mplkip protein_coding protein_coding MGP_CBAJ_T0035925.1 MGP_CBAJ_G0019950.1 mouse_genomes_project 13 11847356 11896774 + MGP_CBAJ_P0035925 B3galnt2 protein_coding protein_coding MGP_CBAJ_T0098820.1 MGP_CBAJ_G0037075.1 mouse_genomes_project 13 113157732 113157839 + Gm24870 snRNA snRNA MGP_CBAJ_T0037558.1 MGP_CBAJ_G0020568.1 mouse_genomes_project 13 107127446 107134535 - MGP_CBAJ_P0037558 Btf3 protein_coding protein_coding MGP_CBAJ_T0037559.1 MGP_CBAJ_G0020568.1 mouse_genomes_project 13 107127447 107134574 - MGP_CBAJ_P0037559 Btf3 protein_coding protein_coding MGP_CBAJ_T0037560.1 MGP_CBAJ_G0020568.1 mouse_genomes_project 13 107127448 107129066 - Btf3 protein_coding retained_intron MGP_CBAJ_T0037561.1 MGP_CBAJ_G0020568.1 mouse_genomes_project 13 107127492 107133944 - MGP_CBAJ_P0037561 Btf3 protein_coding protein_coding MGP_CBAJ_T0037562.1 MGP_CBAJ_G0020568.1 mouse_genomes_project 13 107130589 107134564 - Btf3 protein_coding retained_intron MGP_CBAJ_T0101586.1 MGP_CBAJ_G0039617.1 mouse_genomes_project 13 20722886 20723402 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0009843.1 MGP_CBAJ_G0007981.1 mouse_genomes_project 13 123672375 123672455 + Mir449b miRNA miRNA MGP_CBAJ_T0101623.1 MGP_CBAJ_G0039654.1 mouse_genomes_project 13 34307083 34310863 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0101626.1 MGP_CBAJ_G0039657.1 mouse_genomes_project 13 34362538 34365052 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0036410.1 MGP_CBAJ_G0020181.1 mouse_genomes_project 13 39328551 39353834 + MGP_CBAJ_P0036410 Snrnp48 protein_coding protein_coding MGP_CBAJ_T0036411.1 MGP_CBAJ_G0020181.1 mouse_genomes_project 13 39328563 39353093 + MGP_CBAJ_P0036411 Snrnp48 protein_coding protein_coding MGP_CBAJ_T0036412.1 MGP_CBAJ_G0020181.1 mouse_genomes_project 13 39328585 39338255 + MGP_CBAJ_P0036412 Snrnp48 protein_coding unknown_likely_coding MGP_CBAJ_T0009839.1 MGP_CBAJ_G0007977.1 mouse_genomes_project 13 117765776 117765947 - Gm22118 miRNA miRNA MGP_CBAJ_T0035872.1 MGP_CBAJ_G0019931.1 mouse_genomes_project 13 6053166 6059920 + MGP_CBAJ_P0035872 protein_coding protein_coding MGP_CBAJ_T0035873.1 MGP_CBAJ_G0019931.1 mouse_genomes_project 13 6057077 6059790 + MGP_CBAJ_P0035873 protein_coding protein_coding MGP_CBAJ_T0003383.1 MGP_CBAJ_G0003106.1 mouse_genomes_project 13 59140539 59145225 - antisense antisense MGP_CBAJ_T0003384.1 MGP_CBAJ_G0003106.1 mouse_genomes_project 13 59141343 59145210 - antisense antisense MGP_CBAJ_T0003385.1 MGP_CBAJ_G0003106.1 mouse_genomes_project 13 59141350 59145236 - antisense antisense MGP_CBAJ_T0097771.1 MGP_CBAJ_G0036044.1 mouse_genomes_project 13 119861339 119861736 + pseudogene pseudogene MGP_CBAJ_T0012751.1 MGP_CBAJ_G0010863.1 mouse_genomes_project 13 34123470 34123817 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0036389.1 MGP_CBAJ_G0020176.1 mouse_genomes_project 13 38831798 38973589 + MGP_CBAJ_P0036389 Rreb1 protein_coding protein_coding MGP_CBAJ_T0036390.1 MGP_CBAJ_G0020176.1 mouse_genomes_project 13 38894022 38973566 + MGP_CBAJ_P0036390 Rreb1 protein_coding protein_coding MGP_CBAJ_T0036391.1 MGP_CBAJ_G0020176.1 mouse_genomes_project 13 38894086 39015313 + MGP_CBAJ_P0036391 Rreb1 protein_coding protein_coding MGP_CBAJ_T0036392.1 MGP_CBAJ_G0020176.1 mouse_genomes_project 13 38894362 39034065 + MGP_CBAJ_P0036392 Rreb1 protein_coding protein_coding MGP_CBAJ_T0036393.1 MGP_CBAJ_G0020176.1 mouse_genomes_project 13 38894979 39012467 + MGP_CBAJ_P0036393 Rreb1 protein_coding protein_coding MGP_CBAJ_T0036394.1 MGP_CBAJ_G0020176.1 mouse_genomes_project 13 38894979 39029089 + MGP_CBAJ_P0036394 Rreb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036395.1 MGP_CBAJ_G0020176.1 mouse_genomes_project 13 38895440 39012469 + MGP_CBAJ_P0036395 Rreb1 protein_coding protein_coding MGP_CBAJ_T0036396.1 MGP_CBAJ_G0020176.1 mouse_genomes_project 13 38934996 38973654 + MGP_CBAJ_P0036396 Rreb1 protein_coding protein_coding MGP_CBAJ_T0036397.1 MGP_CBAJ_G0020176.1 mouse_genomes_project 13 38968175 39034067 + MGP_CBAJ_P0036397 Rreb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036398.1 MGP_CBAJ_G0020176.1 mouse_genomes_project 13 38968612 39034059 + MGP_CBAJ_P0036398 Rreb1 protein_coding protein_coding MGP_CBAJ_T0036399.1 MGP_CBAJ_G0020176.1 mouse_genomes_project 13 38973674 39034071 + MGP_CBAJ_P0036399 Rreb1 protein_coding unknown_likely_coding MGP_CBAJ_T0036400.1 MGP_CBAJ_G0020176.1 mouse_genomes_project 13 39029080 39031271 + MGP_CBAJ_P0036400 Rreb1 protein_coding protein_coding MGP_CBAJ_T0036071.1 MGP_CBAJ_G0020014.1 mouse_genomes_project 13 20657643 20665212 - MGP_CBAJ_P0036071 Prss16 protein_coding protein_coding MGP_CBAJ_T0036072.1 MGP_CBAJ_G0020014.1 mouse_genomes_project 13 20658027 20660690 - Prss16 protein_coding processed_transcript MGP_CBAJ_T0036073.1 MGP_CBAJ_G0020014.1 mouse_genomes_project 13 20658393 20661886 - Prss16 protein_coding processed_transcript MGP_CBAJ_T0036074.1 MGP_CBAJ_G0020014.1 mouse_genomes_project 13 20662702 20665213 - Prss16 protein_coding processed_transcript MGP_CBAJ_T0036510.1 MGP_CBAJ_G0020222.1 mouse_genomes_project 13 48508780 48523994 + MGP_CBAJ_P0036510 Rbm24 protein_coding protein_coding MGP_CBAJ_T0100067.1 MGP_CBAJ_G0038322.1 mouse_genomes_project 13 81800978 81801061 + Gm23012 snoRNA snoRNA MGP_CBAJ_T0003417.1 MGP_CBAJ_G0003121.1 mouse_genomes_project 13 100410136 100422354 - C030017D09Rik antisense antisense MGP_CBAJ_T0012767.1 MGP_CBAJ_G0010879.1 mouse_genomes_project 13 72816249 72817056 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012774.1 MGP_CBAJ_G0010886.1 mouse_genomes_project 13 79844464 79845806 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101404.1 MGP_CBAJ_G0039460.1 mouse_genomes_project 13 122161420 122164257 - unitary_pseudogene unitary_pseudogene MGP_CBAJ_T0037576.1 MGP_CBAJ_G0020576.1 mouse_genomes_project 13 108110168 108173633 + MGP_CBAJ_P0037576 Zfp366 protein_coding protein_coding MGP_CBAJ_T0011226.1 MGP_CBAJ_G0009364.1 mouse_genomes_project 13 47221194 47221537 - Gm23755 misc_RNA misc_RNA MGP_CBAJ_T0098823.1 MGP_CBAJ_G0037078.1 mouse_genomes_project 13 125956557 125956664 + Gm25985 snRNA snRNA MGP_CBAJ_T0037162.1 MGP_CBAJ_G0020445.1 mouse_genomes_project 13 77631491 77644914 - MGP_CBAJ_P0037162 Irx1 protein_coding protein_coding MGP_CBAJ_T0101612.1 MGP_CBAJ_G0039643.1 mouse_genomes_project 13 22160858 22161319 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0101590.1 MGP_CBAJ_G0039621.1 mouse_genomes_project 13 21112604 21113490 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0098808.1 MGP_CBAJ_G0037063.1 mouse_genomes_project 13 47434278 47434385 - Gm23387 snRNA snRNA MGP_CBAJ_T0097767.1 MGP_CBAJ_G0036040.1 mouse_genomes_project 13 28736303 28736543 + pseudogene pseudogene MGP_CBAJ_T0100068.1 MGP_CBAJ_G0038323.1 mouse_genomes_project 13 81886008 81886138 + Gm23127 snoRNA snoRNA MGP_CBAJ_T0012726.1 MGP_CBAJ_G0010838.1 mouse_genomes_project 13 23012962 23013327 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017091.1 MGP_CBAJ_G0014991.1 mouse_genomes_project 13 24127436 24131453 + 9330162012Rik processed_transcript processed_transcript MGP_CBAJ_T0009829.1 MGP_CBAJ_G0007967.1 mouse_genomes_project 13 89480433 89480492 - Mir3961 miRNA miRNA MGP_CBAJ_T0012759.1 MGP_CBAJ_G0010871.1 mouse_genomes_project 13 64696294 64696660 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0036787.1 MGP_CBAJ_G0020296.1 mouse_genomes_project 13 58400609 58420192 + MGP_CBAJ_P0036787 Fgfr4 protein_coding protein_coding MGP_CBAJ_T0036788.1 MGP_CBAJ_G0020296.1 mouse_genomes_project 13 58403725 58404714 + Fgfr4 protein_coding processed_transcript MGP_CBAJ_T0036789.1 MGP_CBAJ_G0020296.1 mouse_genomes_project 13 58404175 58404963 + Fgfr4 protein_coding retained_intron MGP_CBAJ_T0003380.1 MGP_CBAJ_G0003103.1 mouse_genomes_project 13 57329787 57333372 - Gm16578 antisense antisense MGP_CBAJ_T0036088.1 MGP_CBAJ_G0020028.1 mouse_genomes_project 13 21299689 21307759 + MGP_CBAJ_P0036088 Vmn1r204 protein_coding protein_coding MGP_CBAJ_T0036284.1 MGP_CBAJ_G0020130.1 mouse_genomes_project 13 31785119 31787772 + MGP_CBAJ_P0036284 Foxq1 protein_coding protein_coding MGP_CBAJ_T0036831.1 MGP_CBAJ_G0020313.1 mouse_genomes_project 13 58926606 58931200 + MGP_CBAJ_P0036831 Tmed9 protein_coding protein_coding MGP_CBAJ_T0000845.1 MGP_CBAJ_G0000780.1 mouse_genomes_project 13 43413798 43414261 + TEC TEC MGP_CBAJ_T0036075.1 MGP_CBAJ_G0020015.1 mouse_genomes_project 13 20700586 20701316 - MGP_CBAJ_P0036075 Hist1h4i protein_coding protein_coding MGP_CBAJ_T0037183.1 MGP_CBAJ_G0020455.1 mouse_genomes_project 13 79448286 79467731 - MGP_CBAJ_P0037183 Slc6a18 protein_coding protein_coding MGP_CBAJ_T0037184.1 MGP_CBAJ_G0020455.1 mouse_genomes_project 13 79448286 79467731 - MGP_CBAJ_P0037184 Slc6a18 protein_coding protein_coding MGP_CBAJ_T0037185.1 MGP_CBAJ_G0020455.1 mouse_genomes_project 13 79448286 79467731 - MGP_CBAJ_P0037185 Slc6a18 protein_coding protein_coding MGP_CBAJ_T0037186.1 MGP_CBAJ_G0020455.1 mouse_genomes_project 13 79453829 79467637 - MGP_CBAJ_P0037186 Slc6a18 protein_coding unknown_likely_coding MGP_CBAJ_T0036383.1 MGP_CBAJ_G0020172.1 mouse_genomes_project 13 37103014 37463004 + MGP_CBAJ_P0036383 Fars2 protein_coding protein_coding MGP_CBAJ_T0006425.1 MGP_CBAJ_G0005331.1 mouse_genomes_project 13 23772517 23779167 - C530050E15Rik lincRNA lincRNA MGP_CBAJ_T0012723.1 MGP_CBAJ_G0010835.1 mouse_genomes_project 13 21951205 21951669 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012797.1 MGP_CBAJ_G0010909.1 mouse_genomes_project 13 121739020 121739264 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0036089.1 MGP_CBAJ_G0020029.1 mouse_genomes_project 13 21335836 21336891 - MGP_CBAJ_P0036089 Vmn1r208 protein_coding protein_coding MGP_CBAJ_T0012784.1 MGP_CBAJ_G0010896.1 mouse_genomes_project 13 95144330 95145336 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0037819.1 MGP_CBAJ_G0020647.1 mouse_genomes_project 13 123674257 123677200 - MGP_CBAJ_P0037819 Gm10735 protein_coding protein_coding MGP_CBAJ_T0036078.1 MGP_CBAJ_G0020018.1 mouse_genomes_project 13 20889795 20890698 - MGP_CBAJ_P0036078 Vmn1r192 protein_coding protein_coding MGP_CBAJ_T0006438.1 MGP_CBAJ_G0005340.1 mouse_genomes_project 13 31492553 31606246 + Gm11376 lincRNA lincRNA MGP_CBAJ_T0036586.1 MGP_CBAJ_G0020246.1 mouse_genomes_project 13 51961839 52176407 - MGP_CBAJ_P0036586 Cenpp protein_coding protein_coding MGP_CBAJ_T0101624.1 MGP_CBAJ_G0039655.1 mouse_genomes_project 13 34332766 34333902 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0036234.1 MGP_CBAJ_G0020105.1 mouse_genomes_project 13 27087722 27099080 - MGP_CBAJ_P0036234 Prl8a8 protein_coding protein_coding MGP_CBAJ_T0036235.1 MGP_CBAJ_G0020105.1 mouse_genomes_project 13 27087826 27099078 - MGP_CBAJ_P0036235 Prl8a8 protein_coding protein_coding MGP_CBAJ_T0035964.1 MGP_CBAJ_G0019963.1 mouse_genomes_project 13 15963368 16060105 - MGP_CBAJ_P0035964 Cdk13 protein_coding protein_coding MGP_CBAJ_T0012705.1 MGP_CBAJ_G0010817.1 mouse_genomes_project 13 9323707 9324693 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006476.1 MGP_CBAJ_G0005368.1 mouse_genomes_project 13 56391644 56395944 + Gm2762 lincRNA lincRNA MGP_CBAJ_T0006477.1 MGP_CBAJ_G0005368.1 mouse_genomes_project 13 56391660 56453921 + Gm2762 lincRNA lincRNA MGP_CBAJ_T0006478.1 MGP_CBAJ_G0005368.1 mouse_genomes_project 13 56391676 56455012 + Gm2762 lincRNA lincRNA MGP_CBAJ_T0006479.1 MGP_CBAJ_G0005368.1 mouse_genomes_project 13 56392084 56393326 + Gm2762 lincRNA lincRNA MGP_CBAJ_T0006480.1 MGP_CBAJ_G0005368.1 mouse_genomes_project 13 56392278 56401682 + Gm2762 lincRNA lincRNA MGP_CBAJ_T0006481.1 MGP_CBAJ_G0005368.1 mouse_genomes_project 13 56392278 56397227 + Gm2762 lincRNA lincRNA MGP_CBAJ_T0006482.1 MGP_CBAJ_G0005368.1 mouse_genomes_project 13 56393322 56397243 + Gm2762 lincRNA lincRNA MGP_CBAJ_T0006483.1 MGP_CBAJ_G0005368.1 mouse_genomes_project 13 56399496 56402163 + Gm2762 lincRNA lincRNA MGP_CBAJ_T0098813.1 MGP_CBAJ_G0037068.1 mouse_genomes_project 13 68940301 68940389 - Gm25654 snRNA snRNA MGP_CBAJ_T0037821.1 MGP_CBAJ_G0020649.1 mouse_genomes_project 13 123728124 123735279 - MGP_CBAJ_P0037821 Gzma protein_coding protein_coding MGP_CBAJ_T0012730.1 MGP_CBAJ_G0010842.1 mouse_genomes_project 13 23520987 23521322 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006536.1 MGP_CBAJ_G0005407.1 mouse_genomes_project 13 110032393 110189863 + Gm29502 lincRNA lincRNA MGP_CBAJ_T0037733.1 MGP_CBAJ_G0020622.1 mouse_genomes_project 13 117661290 117838515 - MGP_CBAJ_P0037733 Zswim6 protein_coding protein_coding MGP_CBAJ_T0036816.1 MGP_CBAJ_G0020309.1 mouse_genomes_project 13 58820331 58838059 - MGP_CBAJ_P0036816 Pdlim7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036817.1 MGP_CBAJ_G0020309.1 mouse_genomes_project 13 58822027 58838055 - Pdlim7 protein_coding retained_intron MGP_CBAJ_T0036818.1 MGP_CBAJ_G0020309.1 mouse_genomes_project 13 58822945 58831001 - MGP_CBAJ_P0036818 Pdlim7 protein_coding unknown_likely_coding MGP_CBAJ_T0036819.1 MGP_CBAJ_G0020309.1 mouse_genomes_project 13 58822949 58838058 - Pdlim7 protein_coding retained_intron MGP_CBAJ_T0036820.1 MGP_CBAJ_G0020309.1 mouse_genomes_project 13 58822953 58838067 - MGP_CBAJ_P0036820 Pdlim7 protein_coding protein_coding MGP_CBAJ_T0036821.1 MGP_CBAJ_G0020309.1 mouse_genomes_project 13 58831360 58838059 - MGP_CBAJ_P0036821 Pdlim7 protein_coding protein_coding MGP_CBAJ_T0036822.1 MGP_CBAJ_G0020309.1 mouse_genomes_project 13 58831361 58838059 - MGP_CBAJ_P0036822 Pdlim7 protein_coding protein_coding MGP_CBAJ_T0036823.1 MGP_CBAJ_G0020309.1 mouse_genomes_project 13 58831361 58838055 - MGP_CBAJ_P0036823 Pdlim7 protein_coding protein_coding MGP_CBAJ_T0036824.1 MGP_CBAJ_G0020309.1 mouse_genomes_project 13 58832139 58833641 - Pdlim7 protein_coding retained_intron MGP_CBAJ_T0036825.1 MGP_CBAJ_G0020309.1 mouse_genomes_project 13 58832820 58838297 - MGP_CBAJ_P0036825 Pdlim7 protein_coding protein_coding MGP_CBAJ_T0036826.1 MGP_CBAJ_G0020309.1 mouse_genomes_project 13 58833430 58838042 - Pdlim7 protein_coding retained_intron MGP_CBAJ_T0036827.1 MGP_CBAJ_G0020309.1 mouse_genomes_project 13 58833586 58837330 - MGP_CBAJ_P0036827 Pdlim7 protein_coding protein_coding MGP_CBAJ_T0003360.1 MGP_CBAJ_G0003086.1 mouse_genomes_project 13 20670653 20671533 + Gm11290 antisense antisense MGP_CBAJ_T0003361.1 MGP_CBAJ_G0003086.1 mouse_genomes_project 13 20670653 20671555 + Gm11290 antisense antisense MGP_CBAJ_T0036869.1 MGP_CBAJ_G0020331.1 mouse_genomes_project 13 60090628 60123824 + MGP_CBAJ_P0036869 Tgfbi protein_coding protein_coding MGP_CBAJ_T0037378.1 MGP_CBAJ_G0020507.1 mouse_genomes_project 13 98730239 98752521 - MGP_CBAJ_P0037378 Atp6ap1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0037379.1 MGP_CBAJ_G0020507.1 mouse_genomes_project 13 98730351 98752506 - MGP_CBAJ_P0037379 Atp6ap1l protein_coding protein_coding MGP_CBAJ_T0037380.1 MGP_CBAJ_G0020507.1 mouse_genomes_project 13 98745854 98752549 - Atp6ap1l protein_coding processed_transcript MGP_CBAJ_T0036663.1 MGP_CBAJ_G0020268.1 mouse_genomes_project 13 55897278 55911109 - MGP_CBAJ_P0036663 Nfil3 protein_coding protein_coding MGP_CBAJ_T0035899.1 MGP_CBAJ_G0019936.1 mouse_genomes_project 13 7060968 7633520 - MGP_CBAJ_P0035899 Chrm3 protein_coding protein_coding MGP_CBAJ_T0035900.1 MGP_CBAJ_G0019936.1 mouse_genomes_project 13 7062711 7064481 - MGP_CBAJ_P0035900 Chrm3 protein_coding protein_coding MGP_CBAJ_T0035901.1 MGP_CBAJ_G0019936.1 mouse_genomes_project 13 7466438 7633239 - Chrm3 protein_coding processed_transcript MGP_CBAJ_T0002546.1 MGP_CBAJ_G0002449.1 mouse_genomes_project 13 17561447 17562021 + MGP_CBAJ_P0002546 Tcrg-V6 TR_V_gene TR_V_gene MGP_CBAJ_T0002547.1 MGP_CBAJ_G0002449.1 mouse_genomes_project 13 17561459 17562021 + MGP_CBAJ_P0002547 Tcrg-V6 TR_V_gene TR_V_gene MGP_CBAJ_T0011229.1 MGP_CBAJ_G0009367.1 mouse_genomes_project 13 60186980 60187229 + Gm27698 misc_RNA misc_RNA MGP_CBAJ_T0036321.1 MGP_CBAJ_G0020152.1 mouse_genomes_project 13 34518721 34618439 - MGP_CBAJ_P0036321 Serpinb6a protein_coding protein_coding MGP_CBAJ_T0036322.1 MGP_CBAJ_G0020152.1 mouse_genomes_project 13 34518721 34544367 - MGP_CBAJ_P0036322 Serpinb6a protein_coding protein_coding MGP_CBAJ_T0036323.1 MGP_CBAJ_G0020152.1 mouse_genomes_project 13 34518721 34544252 - MGP_CBAJ_P0036323 Serpinb6a protein_coding protein_coding MGP_CBAJ_T0036324.1 MGP_CBAJ_G0020152.1 mouse_genomes_project 13 34518730 34544165 - MGP_CBAJ_P0036324 Serpinb6a protein_coding protein_coding MGP_CBAJ_T0036325.1 MGP_CBAJ_G0020152.1 mouse_genomes_project 13 34519035 34522864 - Serpinb6a protein_coding processed_transcript MGP_CBAJ_T0036326.1 MGP_CBAJ_G0020152.1 mouse_genomes_project 13 34519593 34618439 - MGP_CBAJ_P0036326 Serpinb6a protein_coding protein_coding MGP_CBAJ_T0036327.1 MGP_CBAJ_G0020152.1 mouse_genomes_project 13 34523730 34544045 - MGP_CBAJ_P0036327 Serpinb6a protein_coding protein_coding MGP_CBAJ_T0036328.1 MGP_CBAJ_G0020152.1 mouse_genomes_project 13 34523746 34544124 - MGP_CBAJ_P0036328 Serpinb6a protein_coding protein_coding MGP_CBAJ_T0036329.1 MGP_CBAJ_G0020152.1 mouse_genomes_project 13 34523823 34544018 - MGP_CBAJ_P0036329 Serpinb6a protein_coding protein_coding MGP_CBAJ_T0036330.1 MGP_CBAJ_G0020152.1 mouse_genomes_project 13 34524428 34544147 - Serpinb6a protein_coding retained_intron MGP_CBAJ_T0036331.1 MGP_CBAJ_G0020152.1 mouse_genomes_project 13 34526118 34544146 - MGP_CBAJ_P0036331 Serpinb6a protein_coding protein_coding MGP_CBAJ_T0036332.1 MGP_CBAJ_G0020152.1 mouse_genomes_project 13 34526190 34618412 - MGP_CBAJ_P0036332 Serpinb6a protein_coding protein_coding MGP_CBAJ_T0036333.1 MGP_CBAJ_G0020152.1 mouse_genomes_project 13 34538295 34544123 - MGP_CBAJ_P0036333 Serpinb6a protein_coding protein_coding MGP_CBAJ_T0036334.1 MGP_CBAJ_G0020152.1 mouse_genomes_project 13 34538308 34618431 - MGP_CBAJ_P0036334 Serpinb6a protein_coding protein_coding MGP_CBAJ_T0036335.1 MGP_CBAJ_G0020152.1 mouse_genomes_project 13 34539752 34618385 - MGP_CBAJ_P0036335 Serpinb6a protein_coding protein_coding MGP_CBAJ_T0036338.1 MGP_CBAJ_G0020152.1 mouse_genomes_project 13 34588616 34618412 - Serpinb6a protein_coding processed_transcript MGP_CBAJ_T0036339.1 MGP_CBAJ_G0020152.1 mouse_genomes_project 13 34602130 34618415 - Serpinb6a protein_coding processed_transcript MGP_CBAJ_T0003358.1 MGP_CBAJ_G0003084.1 mouse_genomes_project 13 20400217 20401561 + Gm11274 antisense antisense MGP_CBAJ_T0003422.1 MGP_CBAJ_G0003125.1 mouse_genomes_project 13 107133989 107134872 + Gm9828 antisense antisense MGP_CBAJ_T0003423.1 MGP_CBAJ_G0003125.1 mouse_genomes_project 13 107134636 107141080 + Gm9828 antisense antisense MGP_CBAJ_T0003424.1 MGP_CBAJ_G0003125.1 mouse_genomes_project 13 107134683 107143468 + Gm9828 antisense antisense MGP_CBAJ_T0003425.1 MGP_CBAJ_G0003125.1 mouse_genomes_project 13 107137339 107140586 + Gm9828 antisense antisense MGP_CBAJ_T0006443.1 MGP_CBAJ_G0005344.1 mouse_genomes_project 13 31581561 31618605 - Gm11375 lincRNA lincRNA MGP_CBAJ_T0006444.1 MGP_CBAJ_G0005344.1 mouse_genomes_project 13 31617034 31618647 - Gm11375 lincRNA lincRNA MGP_CBAJ_T0036671.1 MGP_CBAJ_G0020274.1 mouse_genomes_project 13 57164984 57206504 + MGP_CBAJ_P0036671 Sfxn1 protein_coding protein_coding MGP_CBAJ_T0097939.1 MGP_CBAJ_G0036212.1 mouse_genomes_project 13 22739462 22739570 - Gm24991 rRNA rRNA MGP_CBAJ_T0006534.1 MGP_CBAJ_G0005405.1 mouse_genomes_project 13 108341071 108345923 - lincRNA lincRNA MGP_CBAJ_T0006464.1 MGP_CBAJ_G0005359.1 mouse_genomes_project 13 46219245 46282601 - Gm27007 lincRNA lincRNA MGP_CBAJ_T0036197.1 MGP_CBAJ_G0020088.1 mouse_genomes_project 13 24025207 24091450 + MGP_CBAJ_P0036197 D130043K22Rik protein_coding protein_coding MGP_CBAJ_T0036198.1 MGP_CBAJ_G0020088.1 mouse_genomes_project 13 24025207 24091443 + MGP_CBAJ_P0036198 D130043K22Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0036199.1 MGP_CBAJ_G0020088.1 mouse_genomes_project 13 24034442 24089979 + MGP_CBAJ_P0036199 D130043K22Rik protein_coding unknown_likely_coding MGP_CBAJ_T0036200.1 MGP_CBAJ_G0020088.1 mouse_genomes_project 13 24068715 24070850 + D130043K22Rik protein_coding processed_transcript MGP_CBAJ_T0036201.1 MGP_CBAJ_G0020088.1 mouse_genomes_project 13 24081124 24090028 + D130043K22Rik protein_coding processed_transcript MGP_CBAJ_T0036374.1 MGP_CBAJ_G0020168.1 mouse_genomes_project 13 36476229 36710584 + MGP_CBAJ_P0036374 Cdyl protein_coding protein_coding MGP_CBAJ_T0036375.1 MGP_CBAJ_G0020168.1 mouse_genomes_project 13 36567809 36710578 + MGP_CBAJ_P0036375 Cdyl protein_coding protein_coding MGP_CBAJ_T0012725.1 MGP_CBAJ_G0010837.1 mouse_genomes_project 13 22345825 22345981 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100056.1 MGP_CBAJ_G0038311.1 mouse_genomes_project 13 48884616 48884746 - Gm24620 snoRNA snoRNA MGP_CBAJ_T0037069.1 MGP_CBAJ_G0020399.1 mouse_genomes_project 13 71799955 71815683 - MGP_CBAJ_P0037069 Mterf3 protein_coding protein_coding MGP_CBAJ_T0037070.1 MGP_CBAJ_G0020399.1 mouse_genomes_project 13 71811159 71836349 - MGP_CBAJ_P0037070 Mterf3 protein_coding protein_coding MGP_CBAJ_T0037071.1 MGP_CBAJ_G0020399.1 mouse_genomes_project 13 71811167 71836328 - MGP_CBAJ_P0037071 Mterf3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037072.1 MGP_CBAJ_G0020399.1 mouse_genomes_project 13 71811278 71818799 - Mterf3 protein_coding processed_transcript MGP_CBAJ_T0037073.1 MGP_CBAJ_G0020399.1 mouse_genomes_project 13 71816095 71835969 - MGP_CBAJ_P0037073 Mterf3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037074.1 MGP_CBAJ_G0020399.1 mouse_genomes_project 13 71816125 71831331 - MGP_CBAJ_P0037074 Mterf3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037075.1 MGP_CBAJ_G0020399.1 mouse_genomes_project 13 71823821 71836165 - MGP_CBAJ_P0037075 Mterf3 protein_coding protein_coding MGP_CBAJ_T0037076.1 MGP_CBAJ_G0020399.1 mouse_genomes_project 13 71829379 71831393 - MGP_CBAJ_P0037076 Mterf3 protein_coding protein_coding MGP_CBAJ_T0037077.1 MGP_CBAJ_G0020399.1 mouse_genomes_project 13 71831101 71836299 - MGP_CBAJ_P0037077 Mterf3 protein_coding protein_coding MGP_CBAJ_T0037078.1 MGP_CBAJ_G0020399.1 mouse_genomes_project 13 71834447 71836302 - Mterf3 protein_coding processed_transcript MGP_CBAJ_T0036830.1 MGP_CBAJ_G0020312.1 mouse_genomes_project 13 58864015 58896164 - MGP_CBAJ_P0036830 Fam193b protein_coding protein_coding MGP_CBAJ_T0009808.1 MGP_CBAJ_G0007946.1 mouse_genomes_project 13 50908072 50908175 - Mirlet7d miRNA miRNA MGP_CBAJ_T0011236.1 MGP_CBAJ_G0009374.1 mouse_genomes_project 13 112917524 112917805 - Gm24441 misc_RNA misc_RNA MGP_CBAJ_T0006523.1 MGP_CBAJ_G0005398.1 mouse_genomes_project 13 105952618 105955375 + C430039J16Rik lincRNA lincRNA MGP_CBAJ_T0037257.1 MGP_CBAJ_G0020485.1 mouse_genomes_project 13 83237605 83340356 - MGP_CBAJ_P0037257 Slf1 protein_coding protein_coding MGP_CBAJ_T0037258.1 MGP_CBAJ_G0020485.1 mouse_genomes_project 13 83238068 83328440 - MGP_CBAJ_P0037258 Slf1 protein_coding unknown_likely_coding MGP_CBAJ_T0037259.1 MGP_CBAJ_G0020485.1 mouse_genomes_project 13 83238490 83241924 - Slf1 protein_coding retained_intron MGP_CBAJ_T0037260.1 MGP_CBAJ_G0020485.1 mouse_genomes_project 13 83296940 83340348 - MGP_CBAJ_P0037260 Slf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037261.1 MGP_CBAJ_G0020485.1 mouse_genomes_project 13 83305780 83340348 - MGP_CBAJ_P0037261 Slf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037262.1 MGP_CBAJ_G0020485.1 mouse_genomes_project 13 83306738 83337083 - MGP_CBAJ_P0037262 Slf1 protein_coding protein_coding MGP_CBAJ_T0037263.1 MGP_CBAJ_G0020485.1 mouse_genomes_project 13 83306824 83340321 - MGP_CBAJ_P0037263 Slf1 protein_coding protein_coding MGP_CBAJ_T0037264.1 MGP_CBAJ_G0020485.1 mouse_genomes_project 13 83307697 83340343 - Slf1 protein_coding retained_intron MGP_CBAJ_T0012736.1 MGP_CBAJ_G0010848.1 mouse_genomes_project 13 25556035 25556552 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003386.1 MGP_CBAJ_G0003107.1 mouse_genomes_project 13 61942793 61960696 + Gm26555 antisense antisense MGP_CBAJ_T0003387.1 MGP_CBAJ_G0003107.1 mouse_genomes_project 13 61942793 61958139 + Gm26555 antisense antisense MGP_CBAJ_T0003388.1 MGP_CBAJ_G0003107.1 mouse_genomes_project 13 61942801 61960697 + Gm26555 antisense antisense MGP_CBAJ_T0006511.1 MGP_CBAJ_G0005390.1 mouse_genomes_project 13 90589628 90611359 + lincRNA lincRNA MGP_CBAJ_T0006512.1 MGP_CBAJ_G0005390.1 mouse_genomes_project 13 90589628 90772264 + lincRNA lincRNA MGP_CBAJ_T0006514.1 MGP_CBAJ_G0005390.1 mouse_genomes_project 13 90596371 90605723 + lincRNA lincRNA MGP_CBAJ_T0006515.1 MGP_CBAJ_G0005390.1 mouse_genomes_project 13 90600821 90605574 + lincRNA lincRNA MGP_CBAJ_T0006516.1 MGP_CBAJ_G0005390.1 mouse_genomes_project 13 90608915 90783796 + lincRNA lincRNA MGP_CBAJ_T0037494.1 MGP_CBAJ_G0020544.1 mouse_genomes_project 13 103855878 103857242 - MGP_CBAJ_P0037494 S100z protein_coding protein_coding MGP_CBAJ_T0011234.1 MGP_CBAJ_G0009372.1 mouse_genomes_project 13 107956791 107957040 - Gm24733 misc_RNA misc_RNA MGP_CBAJ_T0006519.1 MGP_CBAJ_G0005394.1 mouse_genomes_project 13 99263587 99285040 - A830009L08Rik lincRNA lincRNA MGP_CBAJ_T0037181.1 MGP_CBAJ_G0020453.1 mouse_genomes_project 13 79375705 79392343 + MGP_CBAJ_P0037181 Clptm1l protein_coding protein_coding MGP_CBAJ_T0035874.1 MGP_CBAJ_G0019932.1 mouse_genomes_project 13 6075151 6109285 - MGP_CBAJ_P0035874 Gtpbp4 protein_coding protein_coding MGP_CBAJ_T0017089.1 MGP_CBAJ_G0014989.1 mouse_genomes_project 13 22545053 22549012 - Gm11335 processed_transcript processed_transcript MGP_CBAJ_T0002544.1 MGP_CBAJ_G0002447.1 mouse_genomes_project 13 17549097 17549566 + MGP_CBAJ_P0002544 Tcrg-V7 TR_V_gene TR_V_gene MGP_CBAJ_T0100073.1 MGP_CBAJ_G0038328.1 mouse_genomes_project 13 85578918 85579062 + Gm25383 snoRNA snoRNA MGP_CBAJ_T0037734.1 MGP_CBAJ_G0020623.1 mouse_genomes_project 13 118027407 118033423 + MGP_CBAJ_P0037734 Smim15 protein_coding protein_coding MGP_CBAJ_T0011221.1 MGP_CBAJ_G0009359.1 mouse_genomes_project 13 11675739 11676029 + Gm25271 misc_RNA misc_RNA MGP_CBAJ_T0100057.1 MGP_CBAJ_G0038312.1 mouse_genomes_project 13 49125501 49125630 + Gm24769 snoRNA snoRNA MGP_CBAJ_T0009814.1 MGP_CBAJ_G0007952.1 mouse_genomes_project 13 57751803 57751940 + Gm24195 miRNA miRNA MGP_CBAJ_T0036090.1 MGP_CBAJ_G0020030.1 mouse_genomes_project 13 21370660 21376697 - MGP_CBAJ_P0036090 Vmn1r209 protein_coding protein_coding MGP_CBAJ_T0036964.1 MGP_CBAJ_G0020349.1 mouse_genomes_project 13 63498508 63505249 - MGP_CBAJ_P0036964 4921517D22Rik protein_coding protein_coding MGP_CBAJ_T0101603.1 MGP_CBAJ_G0039634.1 mouse_genomes_project 13 21784918 21785353 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0006551.1 MGP_CBAJ_G0005419.1 mouse_genomes_project 13 129903468 129942678 + 1700003P14Rik lincRNA lincRNA MGP_CBAJ_T0006552.1 MGP_CBAJ_G0005419.1 mouse_genomes_project 13 129904260 129942600 + 1700003P14Rik lincRNA lincRNA MGP_CBAJ_T0006553.1 MGP_CBAJ_G0005419.1 mouse_genomes_project 13 129904276 129942603 + 1700003P14Rik lincRNA lincRNA MGP_CBAJ_T0037156.1 MGP_CBAJ_G0020442.1 mouse_genomes_project 13 76148416 76204790 - MGP_CBAJ_P0037156 Ice1 protein_coding protein_coding MGP_CBAJ_T0036616.1 MGP_CBAJ_G0020255.1 mouse_genomes_project 13 53178506 53186555 + MGP_CBAJ_P0036616 Nutm2 protein_coding protein_coding MGP_CBAJ_T0037845.1 MGP_CBAJ_G0020660.1 mouse_genomes_project 13 125765914 125938827 - MGP_CBAJ_P0037845 Itga1 protein_coding protein_coding MGP_CBAJ_T0017092.1 MGP_CBAJ_G0014992.1 mouse_genomes_project 13 28327533 28381329 - processed_transcript processed_transcript MGP_CBAJ_T0017093.1 MGP_CBAJ_G0014992.1 mouse_genomes_project 13 28328277 28345161 - processed_transcript processed_transcript MGP_CBAJ_T0017094.1 MGP_CBAJ_G0014992.1 mouse_genomes_project 13 28328277 28803296 - processed_transcript processed_transcript MGP_CBAJ_T0017095.1 MGP_CBAJ_G0014992.1 mouse_genomes_project 13 28328440 28376986 - processed_transcript processed_transcript MGP_CBAJ_T0017096.1 MGP_CBAJ_G0014992.1 mouse_genomes_project 13 28366240 28377145 - processed_transcript processed_transcript MGP_CBAJ_T0017097.1 MGP_CBAJ_G0014992.1 mouse_genomes_project 13 28424895 28801132 - processed_transcript processed_transcript MGP_CBAJ_T0017098.1 MGP_CBAJ_G0014992.1 mouse_genomes_project 13 28553309 28803020 - processed_transcript processed_transcript MGP_CBAJ_T0006429.1 MGP_CBAJ_G0005334.1 mouse_genomes_project 13 26848867 26865358 + 4930511O05Rik lincRNA lincRNA MGP_CBAJ_T0037241.1 MGP_CBAJ_G0020479.1 mouse_genomes_project 13 82089745 82125619 + MGP_CBAJ_P0037241 Spata9 protein_coding protein_coding MGP_CBAJ_T0036984.1 MGP_CBAJ_G0020363.1 mouse_genomes_project 13 64873162 64876406 - MGP_CBAJ_P0036984 Tpbpa protein_coding protein_coding MGP_CBAJ_T0037835.1 MGP_CBAJ_G0020658.1 mouse_genomes_project 13 125603390 125613559 + MGP_CBAJ_P0037835 Mocs2 protein_coding protein_coding MGP_CBAJ_T0037836.1 MGP_CBAJ_G0020658.1 mouse_genomes_project 13 125603439 125606264 + Mocs2 protein_coding retained_intron MGP_CBAJ_T0037837.1 MGP_CBAJ_G0020658.1 mouse_genomes_project 13 125603453 125607184 + Mocs2 protein_coding retained_intron MGP_CBAJ_T0037838.1 MGP_CBAJ_G0020658.1 mouse_genomes_project 13 125603465 125614208 + Mocs2 protein_coding retained_intron MGP_CBAJ_T0037839.1 MGP_CBAJ_G0020658.1 mouse_genomes_project 13 125603465 125613876 + MGP_CBAJ_P0037839 Mocs2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037840.1 MGP_CBAJ_G0020658.1 mouse_genomes_project 13 125603472 125610718 + Mocs2 protein_coding retained_intron MGP_CBAJ_T0037841.1 MGP_CBAJ_G0020658.1 mouse_genomes_project 13 125603482 125613746 + MGP_CBAJ_P0037841 Mocs2 protein_coding protein_coding MGP_CBAJ_T0037842.1 MGP_CBAJ_G0020658.1 mouse_genomes_project 13 125603489 125613925 + MGP_CBAJ_P0037842 Mocs2 protein_coding protein_coding MGP_CBAJ_T0037843.1 MGP_CBAJ_G0020658.1 mouse_genomes_project 13 125604100 125610426 + MGP_CBAJ_P0037843 Mocs2 protein_coding protein_coding MGP_CBAJ_T0036229.1 MGP_CBAJ_G0020103.1 mouse_genomes_project 13 26950087 26960861 - MGP_CBAJ_P0036229 Prl2b1 protein_coding protein_coding MGP_CBAJ_T0036230.1 MGP_CBAJ_G0020103.1 mouse_genomes_project 13 26950087 26960861 - MGP_CBAJ_P0036230 Prl2b1 protein_coding protein_coding MGP_CBAJ_T0006430.1 MGP_CBAJ_G0005335.1 mouse_genomes_project 13 28876456 28885088 + Gm26735 lincRNA lincRNA MGP_CBAJ_T0037054.1 MGP_CBAJ_G0020391.1 mouse_genomes_project 13 69741055 69755324 - MGP_CBAJ_P0037054 Prss47 protein_coding protein_coding MGP_CBAJ_T0037055.1 MGP_CBAJ_G0020391.1 mouse_genomes_project 13 69741361 69754411 - MGP_CBAJ_P0037055 Prss47 protein_coding protein_coding MGP_CBAJ_T0098275.1 MGP_CBAJ_G0036544.1 mouse_genomes_project 13 29201955 29202799 - Gm11364 sense_intronic sense_intronic MGP_CBAJ_T0037182.1 MGP_CBAJ_G0020454.1 mouse_genomes_project 13 79402103 79430377 + MGP_CBAJ_P0037182 Tert protein_coding protein_coding MGP_CBAJ_T0012749.1 MGP_CBAJ_G0010861.1 mouse_genomes_project 13 31384155 31384726 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009789.1 MGP_CBAJ_G0007927.1 mouse_genomes_project 13 2753357 2753454 - Gm26259 miRNA miRNA MGP_CBAJ_T0036733.1 MGP_CBAJ_G0020287.1 mouse_genomes_project 13 57931960 57952390 - MGP_CBAJ_P0036733 Gprin1 protein_coding protein_coding MGP_CBAJ_T0036858.1 MGP_CBAJ_G0020323.1 mouse_genomes_project 13 59592698 59597861 - MGP_CBAJ_P0036858 Tifab protein_coding protein_coding MGP_CBAJ_T0037736.1 MGP_CBAJ_G0020625.1 mouse_genomes_project 13 118163254 118207581 + MGP_CBAJ_P0037736 Ercc8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037737.1 MGP_CBAJ_G0020625.1 mouse_genomes_project 13 118163261 118170524 + Ercc8 protein_coding retained_intron MGP_CBAJ_T0037738.1 MGP_CBAJ_G0020625.1 mouse_genomes_project 13 118163261 118207198 + MGP_CBAJ_P0037738 Ercc8 protein_coding protein_coding MGP_CBAJ_T0037739.1 MGP_CBAJ_G0020625.1 mouse_genomes_project 13 118163261 118184133 + MGP_CBAJ_P0037739 Ercc8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037740.1 MGP_CBAJ_G0020625.1 mouse_genomes_project 13 118163261 118181490 + MGP_CBAJ_P0037740 Ercc8 protein_coding protein_coding MGP_CBAJ_T0037741.1 MGP_CBAJ_G0020625.1 mouse_genomes_project 13 118163277 118207198 + MGP_CBAJ_P0037741 Ercc8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037742.1 MGP_CBAJ_G0020625.1 mouse_genomes_project 13 118163294 118207190 + MGP_CBAJ_P0037742 Ercc8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037743.1 MGP_CBAJ_G0020625.1 mouse_genomes_project 13 118163298 118179999 + MGP_CBAJ_P0037743 Ercc8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037744.1 MGP_CBAJ_G0020625.1 mouse_genomes_project 13 118163326 118190785 + MGP_CBAJ_P0037744 Ercc8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037745.1 MGP_CBAJ_G0020625.1 mouse_genomes_project 13 118163327 118185549 + MGP_CBAJ_P0037745 Ercc8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0009842.1 MGP_CBAJ_G0007980.1 mouse_genomes_project 13 123670939 123671048 + Mir449c miRNA miRNA MGP_CBAJ_T0037565.1 MGP_CBAJ_G0020571.1 mouse_genomes_project 13 107484263 107486690 - MGP_CBAJ_P0037565 Tmem174 protein_coding protein_coding MGP_CBAJ_T0101613.1 MGP_CBAJ_G0039644.1 mouse_genomes_project 13 22803238 22804794 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0036049.1 MGP_CBAJ_G0020001.1 mouse_genomes_project 13 20336756 20338103 - MGP_CBAJ_P0036049 protein_coding protein_coding MGP_CBAJ_T0000843.1 MGP_CBAJ_G0000778.1 mouse_genomes_project 13 40516861 40517224 + TEC TEC MGP_CBAJ_T0037420.1 MGP_CBAJ_G0020518.1 mouse_genomes_project 13 100421025 100438722 + MGP_CBAJ_P0037420 Ankrd34b protein_coding protein_coding MGP_CBAJ_T0037421.1 MGP_CBAJ_G0020518.1 mouse_genomes_project 13 100421470 100433520 + MGP_CBAJ_P0037421 Ankrd34b protein_coding protein_coding MGP_CBAJ_T0037422.1 MGP_CBAJ_G0020518.1 mouse_genomes_project 13 100421787 100437994 + MGP_CBAJ_P0037422 Ankrd34b protein_coding protein_coding MGP_CBAJ_T0000855.1 MGP_CBAJ_G0000790.1 mouse_genomes_project 13 97898389 97899208 + TEC TEC MGP_CBAJ_T0101594.1 MGP_CBAJ_G0039625.1 mouse_genomes_project 13 21235081 21235662 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0036139.1 MGP_CBAJ_G0020069.1 mouse_genomes_project 13 22833057 22835649 + MGP_CBAJ_P0036139 Hist1h4b protein_coding protein_coding MGP_CBAJ_T0035965.1 MGP_CBAJ_G0019964.1 mouse_genomes_project 13 16153035 16216432 - MGP_CBAJ_P0035965 Rala protein_coding protein_coding MGP_CBAJ_T0006495.1 MGP_CBAJ_G0005378.1 mouse_genomes_project 13 67828376 67838711 - Gm16907 lincRNA lincRNA MGP_CBAJ_T0037814.1 MGP_CBAJ_G0020646.1 mouse_genomes_project 13 123670067 123673281 + MGP_CBAJ_P0037814 Cdc20b protein_coding protein_coding MGP_CBAJ_T0037815.1 MGP_CBAJ_G0020646.1 mouse_genomes_project 13 123670335 123725507 + MGP_CBAJ_P0037815 Cdc20b protein_coding protein_coding MGP_CBAJ_T0037816.1 MGP_CBAJ_G0020646.1 mouse_genomes_project 13 123670335 123725507 + MGP_CBAJ_P0037816 Cdc20b protein_coding protein_coding MGP_CBAJ_T0037817.1 MGP_CBAJ_G0020646.1 mouse_genomes_project 13 123670335 123725507 + MGP_CBAJ_P0037817 Cdc20b protein_coding protein_coding MGP_CBAJ_T0037818.1 MGP_CBAJ_G0020646.1 mouse_genomes_project 13 123670343 123673281 + MGP_CBAJ_P0037818 Cdc20b protein_coding protein_coding MGP_CBAJ_T0037448.1 MGP_CBAJ_G0020529.1 mouse_genomes_project 13 101749421 101781116 - MGP_CBAJ_P0037448 Gm5096 protein_coding protein_coding MGP_CBAJ_T0037449.1 MGP_CBAJ_G0020529.1 mouse_genomes_project 13 101762798 101780721 - Gm5096 protein_coding retained_intron MGP_CBAJ_T0012772.1 MGP_CBAJ_G0010884.1 mouse_genomes_project 13 75517039 75517450 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0036850.1 MGP_CBAJ_G0020322.1 mouse_genomes_project 13 59477143 59543214 - MGP_CBAJ_P0036850 H2afy protein_coding protein_coding MGP_CBAJ_T0036851.1 MGP_CBAJ_G0020322.1 mouse_genomes_project 13 59477143 59543214 - MGP_CBAJ_P0036851 H2afy protein_coding protein_coding MGP_CBAJ_T0036852.1 MGP_CBAJ_G0020322.1 mouse_genomes_project 13 59477691 59488075 - H2afy protein_coding retained_intron MGP_CBAJ_T0036853.1 MGP_CBAJ_G0020322.1 mouse_genomes_project 13 59477884 59493619 - H2afy protein_coding retained_intron MGP_CBAJ_T0036854.1 MGP_CBAJ_G0020322.1 mouse_genomes_project 13 59499116 59543113 - H2afy protein_coding processed_transcript MGP_CBAJ_T0036855.1 MGP_CBAJ_G0020322.1 mouse_genomes_project 13 59508711 59543023 - H2afy protein_coding retained_intron MGP_CBAJ_T0036856.1 MGP_CBAJ_G0020322.1 mouse_genomes_project 13 59512252 59543942 - H2afy protein_coding processed_transcript MGP_CBAJ_T0036857.1 MGP_CBAJ_G0020322.1 mouse_genomes_project 13 59512263 59542408 - H2afy protein_coding processed_transcript MGP_CBAJ_T0009812.1 MGP_CBAJ_G0007950.1 mouse_genomes_project 13 53320826 53320935 - Gm23952 miRNA miRNA MGP_CBAJ_T0003370.1 MGP_CBAJ_G0003094.1 mouse_genomes_project 13 32056710 32059750 + Gm11379 antisense antisense MGP_CBAJ_T0037369.1 MGP_CBAJ_G0020504.1 mouse_genomes_project 13 97469480 97825662 - MGP_CBAJ_P0037369 Xrcc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037370.1 MGP_CBAJ_G0020504.1 mouse_genomes_project 13 97552936 97825747 - MGP_CBAJ_P0037370 Xrcc4 protein_coding protein_coding MGP_CBAJ_T0037371.1 MGP_CBAJ_G0020504.1 mouse_genomes_project 13 97796194 97825675 - MGP_CBAJ_P0037371 Xrcc4 protein_coding protein_coding MGP_CBAJ_T0037372.1 MGP_CBAJ_G0020504.1 mouse_genomes_project 13 97796229 97825220 - MGP_CBAJ_P0037372 Xrcc4 protein_coding protein_coding MGP_CBAJ_T0035999.1 MGP_CBAJ_G0019975.1 mouse_genomes_project 13 19323922 19563398 + MGP_CBAJ_P0035999 Aoah protein_coding protein_coding MGP_CBAJ_T0100064.1 MGP_CBAJ_G0038319.1 mouse_genomes_project 13 61989013 61989155 + Gm24284 snoRNA snoRNA MGP_CBAJ_T0037846.1 MGP_CBAJ_G0020661.1 mouse_genomes_project 13 125923054 125927050 - MGP_CBAJ_P0037846 Pelo protein_coding protein_coding MGP_CBAJ_T0012737.1 MGP_CBAJ_G0010849.1 mouse_genomes_project 13 26195553 26195975 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100043.1 MGP_CBAJ_G0038298.1 mouse_genomes_project 13 6056212 6056331 - snoRNA snoRNA MGP_CBAJ_T0037351.1 MGP_CBAJ_G0020501.1 mouse_genomes_project 13 96376948 96805343 + MGP_CBAJ_P0037351 Edil3 protein_coding protein_coding MGP_CBAJ_T0037352.1 MGP_CBAJ_G0020501.1 mouse_genomes_project 13 96376964 96731060 + Edil3 protein_coding processed_transcript MGP_CBAJ_T0037353.1 MGP_CBAJ_G0020501.1 mouse_genomes_project 13 96376987 96945672 + MGP_CBAJ_P0037353 Edil3 protein_coding protein_coding MGP_CBAJ_T0037354.1 MGP_CBAJ_G0020501.1 mouse_genomes_project 13 96377033 96551604 + Edil3 protein_coding retained_intron MGP_CBAJ_T0037355.1 MGP_CBAJ_G0020501.1 mouse_genomes_project 13 96377036 96385314 + Edil3 protein_coding processed_transcript MGP_CBAJ_T0037356.1 MGP_CBAJ_G0020501.1 mouse_genomes_project 13 96377090 96627650 + Edil3 protein_coding retained_intron MGP_CBAJ_T0037357.1 MGP_CBAJ_G0020501.1 mouse_genomes_project 13 96377094 96685403 + Edil3 protein_coding retained_intron MGP_CBAJ_T0037358.1 MGP_CBAJ_G0020501.1 mouse_genomes_project 13 96377118 96945672 + MGP_CBAJ_P0037358 Edil3 protein_coding protein_coding MGP_CBAJ_T0009841.1 MGP_CBAJ_G0007979.1 mouse_genomes_project 13 120099555 120099635 + Mir1904 miRNA miRNA MGP_CBAJ_T0006545.1 MGP_CBAJ_G0005415.1 mouse_genomes_project 13 122324691 122330925 + Gm15326 lincRNA lincRNA MGP_CBAJ_T0006546.1 MGP_CBAJ_G0005415.1 mouse_genomes_project 13 122330127 122333718 + Gm15326 lincRNA lincRNA MGP_CBAJ_T0036100.1 MGP_CBAJ_G0020040.1 mouse_genomes_project 13 22024872 22026469 + MGP_CBAJ_P0036100 Vmn1r219 protein_coding protein_coding MGP_CBAJ_T0000851.1 MGP_CBAJ_G0000786.1 mouse_genomes_project 13 76681663 76684907 - TEC TEC MGP_CBAJ_T0037643.1 MGP_CBAJ_G0020599.1 mouse_genomes_project 13 110994162 111091456 - MGP_CBAJ_P0037643 Pik3r1 protein_coding protein_coding MGP_CBAJ_T0037644.1 MGP_CBAJ_G0020599.1 mouse_genomes_project 13 110997263 111008330 - MGP_CBAJ_P0037644 Pik3r1 protein_coding protein_coding MGP_CBAJ_T0037645.1 MGP_CBAJ_G0020599.1 mouse_genomes_project 13 111001167 111008276 - MGP_CBAJ_P0037645 Pik3r1 protein_coding protein_coding MGP_CBAJ_T0037646.1 MGP_CBAJ_G0020599.1 mouse_genomes_project 13 111002625 111010302 - MGP_CBAJ_P0037646 Pik3r1 protein_coding protein_coding MGP_CBAJ_T0037647.1 MGP_CBAJ_G0020599.1 mouse_genomes_project 13 111005834 111008043 - Pik3r1 protein_coding retained_intron MGP_CBAJ_T0037648.1 MGP_CBAJ_G0020599.1 mouse_genomes_project 13 111017150 111017806 - Pik3r1 protein_coding retained_intron MGP_CBAJ_T0037649.1 MGP_CBAJ_G0020599.1 mouse_genomes_project 13 111075457 111091452 - Pik3r1 protein_coding retained_intron MGP_CBAJ_T0036346.1 MGP_CBAJ_G0020157.1 mouse_genomes_project 13 34763211 34765690 - MGP_CBAJ_P0036346 protein_coding protein_coding MGP_CBAJ_T0036130.1 MGP_CBAJ_G0020062.1 mouse_genomes_project 13 22770485 22776810 - MGP_CBAJ_P0036130 Hfe protein_coding protein_coding MGP_CBAJ_T0036131.1 MGP_CBAJ_G0020062.1 mouse_genomes_project 13 22770485 22776810 - MGP_CBAJ_P0036131 Hfe protein_coding protein_coding MGP_CBAJ_T0036132.1 MGP_CBAJ_G0020062.1 mouse_genomes_project 13 22770485 22776810 - MGP_CBAJ_P0036132 Hfe protein_coding protein_coding MGP_CBAJ_T0035827.1 MGP_CBAJ_G0019920.1 mouse_genomes_project 13 1181476 1199749 - MGP_CBAJ_P0035827 Akr1e1 protein_coding protein_coding MGP_CBAJ_T0035828.1 MGP_CBAJ_G0019920.1 mouse_genomes_project 13 1183209 1199749 - MGP_CBAJ_P0035828 Akr1e1 protein_coding protein_coding MGP_CBAJ_T0035829.1 MGP_CBAJ_G0019920.1 mouse_genomes_project 13 1191996 1199709 - Akr1e1 protein_coding processed_transcript MGP_CBAJ_T0037464.1 MGP_CBAJ_G0020536.1 mouse_genomes_project 13 102613910 102831032 + MGP_CBAJ_P0037464 Ap3b1 protein_coding protein_coding MGP_CBAJ_T0037465.1 MGP_CBAJ_G0020536.1 mouse_genomes_project 13 102614054 102831037 + MGP_CBAJ_P0037465 Ap3b1 protein_coding unknown_likely_coding MGP_CBAJ_T0036973.1 MGP_CBAJ_G0020354.1 mouse_genomes_project 13 64050381 64053343 - MGP_CBAJ_P0036973 Gas1 protein_coding protein_coding MGP_CBAJ_T0037532.1 MGP_CBAJ_G0020560.1 mouse_genomes_project 13 105762837 105773657 - MGP_CBAJ_P0037532 Nsa2 protein_coding protein_coding MGP_CBAJ_T0036032.1 MGP_CBAJ_G0019990.1 mouse_genomes_project 13 20118496 20136420 - MGP_CBAJ_P0036032 Zkscan8 protein_coding protein_coding MGP_CBAJ_T0036033.1 MGP_CBAJ_G0019990.1 mouse_genomes_project 13 20127105 20136332 - MGP_CBAJ_P0036033 Zkscan8 protein_coding protein_coding MGP_CBAJ_T0036034.1 MGP_CBAJ_G0019990.1 mouse_genomes_project 13 20131723 20136373 - MGP_CBAJ_P0036034 Zkscan8 protein_coding protein_coding MGP_CBAJ_T0037100.1 MGP_CBAJ_G0020413.1 mouse_genomes_project 13 72329736 72350851 - MGP_CBAJ_P0037100 Zfp953 protein_coding protein_coding MGP_CBAJ_T0009820.1 MGP_CBAJ_G0007958.1 mouse_genomes_project 13 62064650 62064758 - Mir7-1 miRNA miRNA MGP_CBAJ_T0098791.1 MGP_CBAJ_G0037046.1 mouse_genomes_project 13 14127925 14128032 - Gm22628 snRNA snRNA MGP_CBAJ_T0002459.1 MGP_CBAJ_G0002368.1 mouse_genomes_project 13 17596402 17596462 + MGP_CBAJ_P0002459 Trgj1 TR_J_gene TR_J_gene MGP_CBAJ_T0098793.1 MGP_CBAJ_G0037048.1 mouse_genomes_project 13 16064609 16064716 - Gm24018 snRNA snRNA MGP_CBAJ_T0037711.1 MGP_CBAJ_G0020616.1 mouse_genomes_project 13 114796359 114953694 - MGP_CBAJ_P0037711 Rnf180 protein_coding unknown_likely_coding MGP_CBAJ_T0037712.1 MGP_CBAJ_G0020616.1 mouse_genomes_project 13 114817806 114953694 - MGP_CBAJ_P0037712 Rnf180 protein_coding protein_coding MGP_CBAJ_T0036175.1 MGP_CBAJ_G0020083.1 mouse_genomes_project 13 23755205 23853797 + Fam65b protein_coding retained_intron MGP_CBAJ_T0036176.1 MGP_CBAJ_G0020083.1 mouse_genomes_project 13 23755205 23857634 + MGP_CBAJ_P0036176 Fam65b protein_coding protein_coding MGP_CBAJ_T0036177.1 MGP_CBAJ_G0020083.1 mouse_genomes_project 13 23755222 23857530 + MGP_CBAJ_P0036177 Fam65b protein_coding nonsense_mediated_decay MGP_CBAJ_T0036178.1 MGP_CBAJ_G0020083.1 mouse_genomes_project 13 23781251 23821165 + Fam65b protein_coding retained_intron MGP_CBAJ_T0036179.1 MGP_CBAJ_G0020083.1 mouse_genomes_project 13 23781285 23849135 + MGP_CBAJ_P0036179 Fam65b protein_coding protein_coding MGP_CBAJ_T0036180.1 MGP_CBAJ_G0020083.1 mouse_genomes_project 13 23781297 23857634 + MGP_CBAJ_P0036180 Fam65b protein_coding protein_coding MGP_CBAJ_T0036181.1 MGP_CBAJ_G0020083.1 mouse_genomes_project 13 23781314 23847360 + Fam65b protein_coding retained_intron MGP_CBAJ_T0036182.1 MGP_CBAJ_G0020083.1 mouse_genomes_project 13 23781489 23892007 + MGP_CBAJ_P0036182 Fam65b protein_coding protein_coding MGP_CBAJ_T0036183.1 MGP_CBAJ_G0020083.1 mouse_genomes_project 13 23822098 23827166 + Fam65b protein_coding retained_intron MGP_CBAJ_T0036184.1 MGP_CBAJ_G0020083.1 mouse_genomes_project 13 23824618 23827162 + Fam65b protein_coding retained_intron MGP_CBAJ_T0036185.1 MGP_CBAJ_G0020083.1 mouse_genomes_project 13 23838624 23845694 + Fam65b protein_coding retained_intron MGP_CBAJ_T0036186.1 MGP_CBAJ_G0020083.1 mouse_genomes_project 13 23861695 23869621 + Fam65b protein_coding retained_intron MGP_CBAJ_T0037242.1 MGP_CBAJ_G0020480.1 mouse_genomes_project 13 82127893 82149098 - MGP_CBAJ_P0037242 Rfesd protein_coding protein_coding MGP_CBAJ_T0037243.1 MGP_CBAJ_G0020480.1 mouse_genomes_project 13 82127893 82149248 - MGP_CBAJ_P0037243 Rfesd protein_coding protein_coding MGP_CBAJ_T0037244.1 MGP_CBAJ_G0020480.1 mouse_genomes_project 13 82127893 82149142 - MGP_CBAJ_P0037244 Rfesd protein_coding protein_coding MGP_CBAJ_T0036061.1 MGP_CBAJ_G0020010.1 mouse_genomes_project 13 20468537 20471338 - MGP_CBAJ_P0036061 Hist1h4n protein_coding protein_coding MGP_CBAJ_T0037822.1 MGP_CBAJ_G0020650.1 mouse_genomes_project 13 123803342 123857355 - MGP_CBAJ_P0037822 Gzmk protein_coding protein_coding MGP_CBAJ_T0037823.1 MGP_CBAJ_G0020650.1 mouse_genomes_project 13 123803372 123812596 - MGP_CBAJ_P0037823 Gzmk protein_coding protein_coding MGP_CBAJ_T0037824.1 MGP_CBAJ_G0020650.1 mouse_genomes_project 13 123803526 123812620 - MGP_CBAJ_P0037824 Gzmk protein_coding nonsense_mediated_decay MGP_CBAJ_T0009798.1 MGP_CBAJ_G0007936.1 mouse_genomes_project 13 20769775 20769869 - Gm26300 miRNA miRNA MGP_CBAJ_T0036136.1 MGP_CBAJ_G0020066.1 mouse_genomes_project 13 22822368 22828615 - MGP_CBAJ_P0036136 protein_coding protein_coding MGP_CBAJ_T0036042.1 MGP_CBAJ_G0019996.1 mouse_genomes_project 13 20253988 20257663 - MGP_CBAJ_P0036042 Olfr11 protein_coding protein_coding MGP_CBAJ_T0036043.1 MGP_CBAJ_G0019996.1 mouse_genomes_project 13 20253988 20254930 - MGP_CBAJ_P0036043 Olfr11 protein_coding protein_coding MGP_CBAJ_T0035987.1 MGP_CBAJ_G0019969.1 mouse_genomes_project 13 18019164 18048626 - MGP_CBAJ_P0035987 Epdr1 protein_coding protein_coding MGP_CBAJ_T0036080.1 MGP_CBAJ_G0020020.1 mouse_genomes_project 13 20987157 20988108 + MGP_CBAJ_P0036080 Vmn1r195 protein_coding protein_coding MGP_CBAJ_T0035927.1 MGP_CBAJ_G0019952.1 mouse_genomes_project 13 11895654 11940881 - MGP_CBAJ_P0035927 Tbce protein_coding nonsense_mediated_decay MGP_CBAJ_T0035928.1 MGP_CBAJ_G0019952.1 mouse_genomes_project 13 11895656 11903218 - Tbce protein_coding retained_intron MGP_CBAJ_T0035929.1 MGP_CBAJ_G0019952.1 mouse_genomes_project 13 11895656 11899311 - Tbce protein_coding retained_intron MGP_CBAJ_T0035930.1 MGP_CBAJ_G0019952.1 mouse_genomes_project 13 11895657 11940940 - MGP_CBAJ_P0035930 Tbce protein_coding protein_coding MGP_CBAJ_T0035931.1 MGP_CBAJ_G0019952.1 mouse_genomes_project 13 11895658 11940940 - MGP_CBAJ_P0035931 Tbce protein_coding nonsense_mediated_decay MGP_CBAJ_T0035932.1 MGP_CBAJ_G0019952.1 mouse_genomes_project 13 11900777 11940923 - Tbce protein_coding retained_intron MGP_CBAJ_T0035933.1 MGP_CBAJ_G0019952.1 mouse_genomes_project 13 11902902 11907558 - Tbce protein_coding retained_intron MGP_CBAJ_T0035934.1 MGP_CBAJ_G0019952.1 mouse_genomes_project 13 11902940 11906765 - Tbce protein_coding retained_intron MGP_CBAJ_T0035935.1 MGP_CBAJ_G0019952.1 mouse_genomes_project 13 11902947 11907551 - Tbce protein_coding retained_intron MGP_CBAJ_T0035936.1 MGP_CBAJ_G0019952.1 mouse_genomes_project 13 11902955 11907217 - Tbce protein_coding processed_transcript MGP_CBAJ_T0035937.1 MGP_CBAJ_G0019952.1 mouse_genomes_project 13 11908098 11940914 - Tbce protein_coding retained_intron MGP_CBAJ_T0035938.1 MGP_CBAJ_G0019952.1 mouse_genomes_project 13 11912060 11940898 - Tbce protein_coding retained_intron MGP_CBAJ_T0035939.1 MGP_CBAJ_G0019952.1 mouse_genomes_project 13 11916981 11940919 - Tbce protein_coding retained_intron MGP_CBAJ_T0036279.1 MGP_CBAJ_G0020126.1 mouse_genomes_project 13 30944147 31097096 - MGP_CBAJ_P0036279 Exoc2 protein_coding protein_coding MGP_CBAJ_T0036280.1 MGP_CBAJ_G0020126.1 mouse_genomes_project 13 30944147 31130585 - MGP_CBAJ_P0036280 Exoc2 protein_coding protein_coding MGP_CBAJ_T0012757.1 MGP_CBAJ_G0010869.1 mouse_genomes_project 13 57658214 57658599 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006414.1 MGP_CBAJ_G0005322.1 mouse_genomes_project 13 29276 36709 + lincRNA lincRNA MGP_CBAJ_T0036079.1 MGP_CBAJ_G0020019.1 mouse_genomes_project 13 20956673 20957564 + MGP_CBAJ_P0036079 Vmn1r194 protein_coding protein_coding MGP_CBAJ_T0036055.1 MGP_CBAJ_G0020007.1 mouse_genomes_project 13 20420795 20422548 + MGP_CBAJ_P0036055 Hist1h2bp protein_coding protein_coding MGP_CBAJ_T0036060.1 MGP_CBAJ_G0020007.1 mouse_genomes_project 13 20420842 20421311 + MGP_CBAJ_P0036060 Hist1h2bp protein_coding protein_coding MGP_CBAJ_T0037603.1 MGP_CBAJ_G0020585.1 mouse_genomes_project 13 109355400 109392026 - MGP_CBAJ_P0037603 protein_coding protein_coding MGP_CBAJ_T0036364.1 MGP_CBAJ_G0020166.1 mouse_genomes_project 13 35660972 35715497 - MGP_CBAJ_P0036364 Eci3 protein_coding protein_coding MGP_CBAJ_T0100050.1 MGP_CBAJ_G0038305.1 mouse_genomes_project 13 23989565 23989687 - Gm22358 snoRNA snoRNA MGP_CBAJ_T0012715.1 MGP_CBAJ_G0010827.1 mouse_genomes_project 13 20605810 20606386 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0036350.1 MGP_CBAJ_G0020160.1 mouse_genomes_project 13 34807079 34976272 - MGP_CBAJ_P0036350 Slc22a23 protein_coding protein_coding MGP_CBAJ_T0036351.1 MGP_CBAJ_G0020160.1 mouse_genomes_project 13 34807564 34975541 - MGP_CBAJ_P0036351 Slc22a23 protein_coding protein_coding MGP_CBAJ_T0036352.1 MGP_CBAJ_G0020160.1 mouse_genomes_project 13 34810792 34821456 - Slc22a23 protein_coding retained_intron MGP_CBAJ_T0036353.1 MGP_CBAJ_G0020160.1 mouse_genomes_project 13 34831943 34975685 - MGP_CBAJ_P0036353 Slc22a23 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036354.1 MGP_CBAJ_G0020160.1 mouse_genomes_project 13 34849028 34975293 - Slc22a23 protein_coding processed_transcript MGP_CBAJ_T0101609.1 MGP_CBAJ_G0039640.1 mouse_genomes_project 13 21952047 21952525 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0035919.1 MGP_CBAJ_G0019945.1 mouse_genomes_project 13 11082002 11181177 - MGP_CBAJ_P0035919 protein_coding protein_coding MGP_CBAJ_T0011223.1 MGP_CBAJ_G0009361.1 mouse_genomes_project 13 34905781 34906069 - Gm24530 misc_RNA misc_RNA MGP_CBAJ_T0017109.1 MGP_CBAJ_G0015000.1 mouse_genomes_project 13 118347848 118351037 - Gm2822 processed_transcript processed_transcript MGP_CBAJ_T0000856.1 MGP_CBAJ_G0000791.1 mouse_genomes_project 13 97988442 97988957 + TEC TEC MGP_CBAJ_T0036590.1 MGP_CBAJ_G0020249.1 mouse_genomes_project 13 52100532 52111108 + MGP_CBAJ_P0036590 Omd protein_coding protein_coding MGP_CBAJ_T0036731.1 MGP_CBAJ_G0020286.1 mouse_genomes_project 13 57889239 57931952 + MGP_CBAJ_P0036731 Cdhr2 protein_coding protein_coding MGP_CBAJ_T0036732.1 MGP_CBAJ_G0020286.1 mouse_genomes_project 13 57900741 57931948 + MGP_CBAJ_P0036732 Cdhr2 protein_coding unknown_likely_coding MGP_CBAJ_T0036082.1 MGP_CBAJ_G0020022.1 mouse_genomes_project 13 21051554 21052451 + MGP_CBAJ_P0036082 Vmn1r197 protein_coding protein_coding MGP_CBAJ_T0006547.1 MGP_CBAJ_G0005416.1 mouse_genomes_project 13 122464234 122470827 + Gm15322 lincRNA lincRNA MGP_CBAJ_T0036054.1 MGP_CBAJ_G0020006.1 mouse_genomes_project 13 20416763 20420555 - MGP_CBAJ_P0036054 protein_coding protein_coding MGP_CBAJ_T0035921.1 MGP_CBAJ_G0019947.1 mouse_genomes_project 13 11276676 11276904 + MGP_CBAJ_P0035921 Gm2399 protein_coding protein_coding MGP_CBAJ_T0036202.1 MGP_CBAJ_G0020089.1 mouse_genomes_project 13 24097762 24127697 - MGP_CBAJ_P0036202 Aldh5a1 protein_coding protein_coding MGP_CBAJ_T0006518.1 MGP_CBAJ_G0005393.1 mouse_genomes_project 13 90945199 90992135 - Gm17750 lincRNA lincRNA MGP_CBAJ_T0036285.1 MGP_CBAJ_G0020131.1 mouse_genomes_project 13 31858724 31864318 + MGP_CBAJ_P0036285 Foxf2 protein_coding protein_coding MGP_CBAJ_T0037067.1 MGP_CBAJ_G0020398.1 mouse_genomes_project 13 71792411 71798327 - MGP_CBAJ_P0037067 Uqcrb protein_coding protein_coding MGP_CBAJ_T0037068.1 MGP_CBAJ_G0020398.1 mouse_genomes_project 13 71792759 71795616 - Uqcrb protein_coding processed_transcript MGP_CBAJ_T0036456.1 MGP_CBAJ_G0020205.1 mouse_genomes_project 13 44357413 44848982 + MGP_CBAJ_P0036456 Phactr1 protein_coding protein_coding MGP_CBAJ_T0036457.1 MGP_CBAJ_G0020205.1 mouse_genomes_project 13 44357589 44667310 + Phactr1 protein_coding retained_intron MGP_CBAJ_T0036458.1 MGP_CBAJ_G0020205.1 mouse_genomes_project 13 44358303 44845702 + MGP_CBAJ_P0036458 Phactr1 protein_coding protein_coding MGP_CBAJ_T0036459.1 MGP_CBAJ_G0020205.1 mouse_genomes_project 13 44359488 44845646 + MGP_CBAJ_P0036459 Phactr1 protein_coding protein_coding MGP_CBAJ_T0036460.1 MGP_CBAJ_G0020205.1 mouse_genomes_project 13 44392655 44845854 + MGP_CBAJ_P0036460 Phactr1 protein_coding protein_coding MGP_CBAJ_T0036461.1 MGP_CBAJ_G0020205.1 mouse_genomes_project 13 44392693 44848984 + MGP_CBAJ_P0036461 Phactr1 protein_coding protein_coding MGP_CBAJ_T0036462.1 MGP_CBAJ_G0020205.1 mouse_genomes_project 13 44570480 44845761 + MGP_CBAJ_P0036462 Phactr1 protein_coding protein_coding MGP_CBAJ_T0036463.1 MGP_CBAJ_G0020205.1 mouse_genomes_project 13 44571090 44665073 + Phactr1 protein_coding processed_transcript MGP_CBAJ_T0036464.1 MGP_CBAJ_G0020205.1 mouse_genomes_project 13 44822709 44845836 + Phactr1 protein_coding processed_transcript MGP_CBAJ_T0036465.1 MGP_CBAJ_G0020205.1 mouse_genomes_project 13 44833353 44845864 + Phactr1 protein_coding processed_transcript MGP_CBAJ_T0036466.1 MGP_CBAJ_G0020205.1 mouse_genomes_project 13 44833368 44845812 + Phactr1 protein_coding processed_transcript MGP_CBAJ_T0036467.1 MGP_CBAJ_G0020205.1 mouse_genomes_project 13 44836350 44845706 + Phactr1 protein_coding processed_transcript MGP_CBAJ_T0036468.1 MGP_CBAJ_G0020205.1 mouse_genomes_project 13 44836350 44845706 + Phactr1 protein_coding processed_transcript MGP_CBAJ_T0036469.1 MGP_CBAJ_G0020205.1 mouse_genomes_project 13 44836382 44845706 + Phactr1 protein_coding processed_transcript MGP_CBAJ_T0036470.1 MGP_CBAJ_G0020205.1 mouse_genomes_project 13 44843450 44844694 + Phactr1 protein_coding processed_transcript MGP_CBAJ_T0036471.1 MGP_CBAJ_G0020205.1 mouse_genomes_project 13 44845836 44848970 + Phactr1 protein_coding processed_transcript MGP_CBAJ_T0012755.1 MGP_CBAJ_G0010867.1 mouse_genomes_project 13 46263845 46264825 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0002460.1 MGP_CBAJ_G0002369.1 mouse_genomes_project 13 17705244 17705304 - MGP_CBAJ_P0002460 Trgj3 TR_J_gene TR_J_gene MGP_CBAJ_T0036666.1 MGP_CBAJ_G0020270.1 mouse_genomes_project 13 56329719 56374487 - MGP_CBAJ_P0036666 Sptlc1 protein_coding protein_coding MGP_CBAJ_T0037517.1 MGP_CBAJ_G0020556.1 mouse_genomes_project 13 105179391 105202220 - MGP_CBAJ_P0037517 Hmgcr protein_coding protein_coding MGP_CBAJ_T0037518.1 MGP_CBAJ_G0020556.1 mouse_genomes_project 13 105180698 105197960 - MGP_CBAJ_P0037518 Hmgcr protein_coding nonsense_mediated_decay MGP_CBAJ_T0037519.1 MGP_CBAJ_G0020556.1 mouse_genomes_project 13 105180865 105183221 - MGP_CBAJ_P0037519 Hmgcr protein_coding protein_coding MGP_CBAJ_T0037520.1 MGP_CBAJ_G0020556.1 mouse_genomes_project 13 105181771 105197907 - MGP_CBAJ_P0037520 Hmgcr protein_coding protein_coding MGP_CBAJ_T0037521.1 MGP_CBAJ_G0020556.1 mouse_genomes_project 13 105182538 105187063 - MGP_CBAJ_P0037521 Hmgcr protein_coding protein_coding MGP_CBAJ_T0037522.1 MGP_CBAJ_G0020556.1 mouse_genomes_project 13 105190126 105202159 - Hmgcr protein_coding retained_intron MGP_CBAJ_T0037523.1 MGP_CBAJ_G0020556.1 mouse_genomes_project 13 105191392 105202107 - MGP_CBAJ_P0037523 Hmgcr protein_coding protein_coding MGP_CBAJ_T0037524.1 MGP_CBAJ_G0020556.1 mouse_genomes_project 13 105196902 105197784 - Hmgcr protein_coding retained_intron MGP_CBAJ_T0037525.1 MGP_CBAJ_G0020556.1 mouse_genomes_project 13 105197312 105200844 - MGP_CBAJ_P0037525 Hmgcr protein_coding protein_coding MGP_CBAJ_T0037526.1 MGP_CBAJ_G0020556.1 mouse_genomes_project 13 105197317 105201752 - MGP_CBAJ_P0037526 Hmgcr protein_coding protein_coding MGP_CBAJ_T0037527.1 MGP_CBAJ_G0020556.1 mouse_genomes_project 13 105197515 105202132 - Hmgcr protein_coding retained_intron MGP_CBAJ_T0037783.1 MGP_CBAJ_G0020634.1 mouse_genomes_project 13 122132807 122158624 + MGP_CBAJ_P0037783 Mier3 protein_coding protein_coding MGP_CBAJ_T0037784.1 MGP_CBAJ_G0020634.1 mouse_genomes_project 13 122132945 122157665 + MGP_CBAJ_P0037784 Mier3 protein_coding protein_coding MGP_CBAJ_T0037785.1 MGP_CBAJ_G0020634.1 mouse_genomes_project 13 122132954 122138431 + Mier3 protein_coding retained_intron MGP_CBAJ_T0037786.1 MGP_CBAJ_G0020634.1 mouse_genomes_project 13 122132955 122158621 + MGP_CBAJ_P0037786 Mier3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037787.1 MGP_CBAJ_G0020634.1 mouse_genomes_project 13 122133392 122158630 + MGP_CBAJ_P0037787 Mier3 protein_coding protein_coding MGP_CBAJ_T0036236.1 MGP_CBAJ_G0020106.1 mouse_genomes_project 13 27147133 27153999 - MGP_CBAJ_P0036236 Prl8a9 protein_coding protein_coding MGP_CBAJ_T0037566.1 MGP_CBAJ_G0020572.1 mouse_genomes_project 13 107540336 107551326 - MGP_CBAJ_P0037566 Tmem171 protein_coding protein_coding MGP_CBAJ_T0037567.1 MGP_CBAJ_G0020572.1 mouse_genomes_project 13 107548814 107551260 - MGP_CBAJ_P0037567 Tmem171 protein_coding protein_coding MGP_CBAJ_T0012707.1 MGP_CBAJ_G0010819.1 mouse_genomes_project 13 15240294 15241252 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0037788.1 MGP_CBAJ_G0020635.1 mouse_genomes_project 13 122187457 122253488 - MGP_CBAJ_P0037788 Map3k1 protein_coding protein_coding MGP_CBAJ_T0037789.1 MGP_CBAJ_G0020635.1 mouse_genomes_project 13 122191236 122193814 - Map3k1 protein_coding retained_intron MGP_CBAJ_T0037790.1 MGP_CBAJ_G0020635.1 mouse_genomes_project 13 122196015 122197142 - Map3k1 protein_coding retained_intron MGP_CBAJ_T0037791.1 MGP_CBAJ_G0020635.1 mouse_genomes_project 13 122210064 122211009 - Map3k1 protein_coding processed_transcript MGP_CBAJ_T0037792.1 MGP_CBAJ_G0020635.1 mouse_genomes_project 13 122210439 122252957 - MGP_CBAJ_P0037792 Map3k1 protein_coding protein_coding MGP_CBAJ_T0100051.1 MGP_CBAJ_G0038306.1 mouse_genomes_project 13 31563242 31563357 + Gm22330 snoRNA snoRNA MGP_CBAJ_T0037168.1 MGP_CBAJ_G0020447.1 mouse_genomes_project 13 79012651 79022554 + MGP_CBAJ_P0037168 Irx4 protein_coding protein_coding MGP_CBAJ_T0037169.1 MGP_CBAJ_G0020447.1 mouse_genomes_project 13 79012669 79022554 + MGP_CBAJ_P0037169 Irx4 protein_coding protein_coding MGP_CBAJ_T0037180.1 MGP_CBAJ_G0020452.1 mouse_genomes_project 13 79302420 79349811 + MGP_CBAJ_P0037180 Slc6a3 protein_coding protein_coding MGP_CBAJ_T0002545.1 MGP_CBAJ_G0002448.1 mouse_genomes_project 13 17556061 17556594 + MGP_CBAJ_P0002545 Tcrg-V4 TR_V_gene TR_V_gene MGP_CBAJ_T0037435.1 MGP_CBAJ_G0020527.1 mouse_genomes_project 13 101377127 101469673 + MGP_CBAJ_P0037435 Homer1 protein_coding protein_coding MGP_CBAJ_T0037436.1 MGP_CBAJ_G0020527.1 mouse_genomes_project 13 101377472 101449648 + MGP_CBAJ_P0037436 Homer1 protein_coding protein_coding MGP_CBAJ_T0037437.1 MGP_CBAJ_G0020527.1 mouse_genomes_project 13 101377865 101442964 + MGP_CBAJ_P0037437 Homer1 protein_coding protein_coding MGP_CBAJ_T0037438.1 MGP_CBAJ_G0020527.1 mouse_genomes_project 13 101378170 101492824 + MGP_CBAJ_P0037438 Homer1 protein_coding protein_coding MGP_CBAJ_T0037439.1 MGP_CBAJ_G0020527.1 mouse_genomes_project 13 101378474 101491413 + MGP_CBAJ_P0037439 Homer1 protein_coding protein_coding MGP_CBAJ_T0037440.1 MGP_CBAJ_G0020527.1 mouse_genomes_project 13 101378474 101491413 + MGP_CBAJ_P0037440 Homer1 protein_coding protein_coding MGP_CBAJ_T0037441.1 MGP_CBAJ_G0020527.1 mouse_genomes_project 13 101378530 101492933 + MGP_CBAJ_P0037441 Homer1 protein_coding protein_coding MGP_CBAJ_T0037442.1 MGP_CBAJ_G0020527.1 mouse_genomes_project 13 101378555 101448920 + MGP_CBAJ_P0037442 Homer1 protein_coding protein_coding MGP_CBAJ_T0037443.1 MGP_CBAJ_G0020527.1 mouse_genomes_project 13 101378649 101491449 + MGP_CBAJ_P0037443 Homer1 protein_coding protein_coding MGP_CBAJ_T0037444.1 MGP_CBAJ_G0020527.1 mouse_genomes_project 13 101378649 101491449 + MGP_CBAJ_P0037444 Homer1 protein_coding protein_coding MGP_CBAJ_T0037445.1 MGP_CBAJ_G0020527.1 mouse_genomes_project 13 101381407 101493272 + MGP_CBAJ_P0037445 Homer1 protein_coding protein_coding MGP_CBAJ_T0037446.1 MGP_CBAJ_G0020527.1 mouse_genomes_project 13 101466312 101491372 + MGP_CBAJ_P0037446 Homer1 protein_coding unknown_likely_coding MGP_CBAJ_T0037279.1 MGP_CBAJ_G0020491.1 mouse_genomes_project 13 87723361 87994926 - MGP_CBAJ_P0037279 Adgrv1 protein_coding protein_coding MGP_CBAJ_T0037280.1 MGP_CBAJ_G0020491.1 mouse_genomes_project 13 87723361 88312720 - MGP_CBAJ_P0037280 Adgrv1 protein_coding protein_coding MGP_CBAJ_T0037281.1 MGP_CBAJ_G0020491.1 mouse_genomes_project 13 87723362 88103396 - MGP_CBAJ_P0037281 Adgrv1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037282.1 MGP_CBAJ_G0020491.1 mouse_genomes_project 13 87723676 88275194 - MGP_CBAJ_P0037282 Adgrv1 protein_coding unknown_likely_coding MGP_CBAJ_T0037283.1 MGP_CBAJ_G0020491.1 mouse_genomes_project 13 87723676 88312594 - MGP_CBAJ_P0037283 Adgrv1 protein_coding unknown_likely_coding MGP_CBAJ_T0037284.1 MGP_CBAJ_G0020491.1 mouse_genomes_project 13 87735242 87994447 - Adgrv1 protein_coding processed_transcript MGP_CBAJ_T0037285.1 MGP_CBAJ_G0020491.1 mouse_genomes_project 13 88165760 88256567 - MGP_CBAJ_P0037285 Adgrv1 protein_coding protein_coding MGP_CBAJ_T0037286.1 MGP_CBAJ_G0020491.1 mouse_genomes_project 13 88165761 88270742 - Adgrv1 protein_coding retained_intron MGP_CBAJ_T0037287.1 MGP_CBAJ_G0020491.1 mouse_genomes_project 13 88165761 88202220 - Adgrv1 protein_coding retained_intron MGP_CBAJ_T0037288.1 MGP_CBAJ_G0020491.1 mouse_genomes_project 13 88212628 88215726 - Adgrv1 protein_coding retained_intron MGP_CBAJ_T0037289.1 MGP_CBAJ_G0020491.1 mouse_genomes_project 13 88242282 88244598 - Adgrv1 protein_coding retained_intron MGP_CBAJ_T0037290.1 MGP_CBAJ_G0020491.1 mouse_genomes_project 13 88246057 88312705 - MGP_CBAJ_P0037290 Adgrv1 protein_coding protein_coding MGP_CBAJ_T0037291.1 MGP_CBAJ_G0020491.1 mouse_genomes_project 13 88263352 88312705 - MGP_CBAJ_P0037291 Adgrv1 protein_coding protein_coding MGP_CBAJ_T0037292.1 MGP_CBAJ_G0020491.1 mouse_genomes_project 13 88264967 88312707 - MGP_CBAJ_P0037292 Adgrv1 protein_coding protein_coding MGP_CBAJ_T0037293.1 MGP_CBAJ_G0020491.1 mouse_genomes_project 13 88267267 88269967 - Adgrv1 protein_coding retained_intron MGP_CBAJ_T0011222.1 MGP_CBAJ_G0009360.1 mouse_genomes_project 13 15028728 15029016 - Gm26098 misc_RNA misc_RNA MGP_CBAJ_T0035833.1 MGP_CBAJ_G0019924.1 mouse_genomes_project 13 3372074 3411219 + MGP_CBAJ_P0035833 Pitrm1 protein_coding unknown_likely_coding MGP_CBAJ_T0035834.1 MGP_CBAJ_G0019924.1 mouse_genomes_project 13 3372089 3411615 + MGP_CBAJ_P0035834 Pitrm1 protein_coding protein_coding MGP_CBAJ_T0006505.1 MGP_CBAJ_G0005386.1 mouse_genomes_project 13 86481896 86677990 - lincRNA lincRNA MGP_CBAJ_T0037826.1 MGP_CBAJ_G0020652.1 mouse_genomes_project 13 123910421 123999985 + MGP_CBAJ_P0037826 BC067074 protein_coding protein_coding MGP_CBAJ_T0037827.1 MGP_CBAJ_G0020652.1 mouse_genomes_project 13 123967888 124000983 + MGP_CBAJ_P0037827 BC067074 protein_coding protein_coding MGP_CBAJ_T0037828.1 MGP_CBAJ_G0020652.1 mouse_genomes_project 13 123979378 124014291 + MGP_CBAJ_P0037828 BC067074 protein_coding protein_coding MGP_CBAJ_T0035820.1 MGP_CBAJ_G0019917.1 mouse_genomes_project 13 1014172 1044024 + MGP_CBAJ_P0035820 Akr1c6 protein_coding protein_coding MGP_CBAJ_T0035821.1 MGP_CBAJ_G0019917.1 mouse_genomes_project 13 1014298 1014913 + Akr1c6 protein_coding processed_transcript MGP_CBAJ_T0035822.1 MGP_CBAJ_G0019917.1 mouse_genomes_project 13 1016012 1035845 + MGP_CBAJ_P0035822 Akr1c6 protein_coding protein_coding MGP_CBAJ_T0003410.1 MGP_CBAJ_G0003118.1 mouse_genomes_project 13 91153460 91156054 - A230107N01Rik antisense antisense MGP_CBAJ_T0003411.1 MGP_CBAJ_G0003118.1 mouse_genomes_project 13 91154488 91155979 - A230107N01Rik antisense antisense MGP_CBAJ_T0101599.1 MGP_CBAJ_G0039630.1 mouse_genomes_project 13 21559998 21560995 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0012728.1 MGP_CBAJ_G0010840.1 mouse_genomes_project 13 23394438 23394850 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0003431.1 MGP_CBAJ_G0003129.1 mouse_genomes_project 13 114275823 114293615 + antisense antisense MGP_CBAJ_T0036187.1 MGP_CBAJ_G0020084.1 mouse_genomes_project 13 23915564 23925638 - MGP_CBAJ_P0036187 Gmnn protein_coding protein_coding MGP_CBAJ_T0036188.1 MGP_CBAJ_G0020084.1 mouse_genomes_project 13 23915564 23925576 - MGP_CBAJ_P0036188 Gmnn protein_coding protein_coding MGP_CBAJ_T0036189.1 MGP_CBAJ_G0020084.1 mouse_genomes_project 13 23915810 23925191 - MGP_CBAJ_P0036189 Gmnn protein_coding protein_coding MGP_CBAJ_T0036190.1 MGP_CBAJ_G0020084.1 mouse_genomes_project 13 23915907 23925155 - MGP_CBAJ_P0036190 Gmnn protein_coding protein_coding MGP_CBAJ_T0036191.1 MGP_CBAJ_G0020084.1 mouse_genomes_project 13 23917425 23925612 - MGP_CBAJ_P0036191 Gmnn protein_coding nonsense_mediated_decay MGP_CBAJ_T0036962.1 MGP_CBAJ_G0020348.1 mouse_genomes_project 13 63444563 63486909 - MGP_CBAJ_P0036962 Golm1 protein_coding protein_coding MGP_CBAJ_T0036963.1 MGP_CBAJ_G0020348.1 mouse_genomes_project 13 63444563 63486909 - MGP_CBAJ_P0036963 Golm1 protein_coding protein_coding MGP_CBAJ_T0036315.1 MGP_CBAJ_G0020148.1 mouse_genomes_project 13 33766599 33778263 + MGP_CBAJ_P0036315 Serpinb9g protein_coding protein_coding MGP_CBAJ_T0037708.1 MGP_CBAJ_G0020613.1 mouse_genomes_project 13 114450038 114470357 - MGP_CBAJ_P0037708 Fam159b protein_coding protein_coding MGP_CBAJ_T0037145.1 MGP_CBAJ_G0020438.1 mouse_genomes_project 13 74976446 75066742 + MGP_CBAJ_P0037145 Nsun2 protein_coding protein_coding MGP_CBAJ_T0037146.1 MGP_CBAJ_G0020438.1 mouse_genomes_project 13 74976468 75057220 + Nsun2 protein_coding processed_transcript MGP_CBAJ_T0037149.1 MGP_CBAJ_G0020438.1 mouse_genomes_project 13 75063320 75085296 + MGP_CBAJ_P0037149 Nsun2 protein_coding protein_coding MGP_CBAJ_T0037150.1 MGP_CBAJ_G0020438.1 mouse_genomes_project 13 75063364 75085588 + MGP_CBAJ_P0037150 Nsun2 protein_coding protein_coding MGP_CBAJ_T0037151.1 MGP_CBAJ_G0020438.1 mouse_genomes_project 13 75063874 75070868 + Nsun2 protein_coding processed_transcript MGP_CBAJ_T0037152.1 MGP_CBAJ_G0020438.1 mouse_genomes_project 13 75072596 75080910 + Nsun2 protein_coding retained_intron MGP_CBAJ_T0037153.1 MGP_CBAJ_G0020438.1 mouse_genomes_project 13 75082020 75082949 + Nsun2 protein_coding retained_intron MGP_CBAJ_T0036418.1 MGP_CBAJ_G0020185.1 mouse_genomes_project 13 39837568 39850726 - MGP_CBAJ_P0036418 Eef1e1 protein_coding protein_coding MGP_CBAJ_T0037398.1 MGP_CBAJ_G0020513.1 mouse_genomes_project 13 99802366 99828684 - MGP_CBAJ_P0037398 Ckmt2 protein_coding protein_coding MGP_CBAJ_T0012777.1 MGP_CBAJ_G0010889.1 mouse_genomes_project 13 82881088 82882381 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000858.1 MGP_CBAJ_G0000793.1 mouse_genomes_project 13 98443622 98444035 + TEC TEC MGP_CBAJ_T0036359.1 MGP_CBAJ_G0020162.1 mouse_genomes_project 13 35411127 35424009 + MGP_CBAJ_P0036359 Fam50b protein_coding protein_coding MGP_CBAJ_T0037412.1 MGP_CBAJ_G0020516.1 mouse_genomes_project 13 100286907 100288175 + MGP_CBAJ_P0037412 Gm20379 protein_coding protein_coding MGP_CBAJ_T0006535.1 MGP_CBAJ_G0005406.1 mouse_genomes_project 13 108457229 108464744 + Gm26559 lincRNA lincRNA MGP_CBAJ_T0036227.1 MGP_CBAJ_G0020102.1 mouse_genomes_project 13 26908550 26918991 + MGP_CBAJ_P0036227 Prl8a2 protein_coding protein_coding MGP_CBAJ_T0036228.1 MGP_CBAJ_G0020102.1 mouse_genomes_project 13 26908556 26918979 + MGP_CBAJ_P0036228 Prl8a2 protein_coding protein_coding MGP_CBAJ_T0012738.1 MGP_CBAJ_G0010850.1 mouse_genomes_project 13 26329620 26329926 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0037681.1 MGP_CBAJ_G0020604.1 mouse_genomes_project 13 113551735 113637442 - MGP_CBAJ_P0037681 Nln protein_coding protein_coding MGP_CBAJ_T0003379.1 MGP_CBAJ_G0003102.1 mouse_genomes_project 13 52999875 53204405 - antisense antisense MGP_CBAJ_T0037433.1 MGP_CBAJ_G0020525.1 mouse_genomes_project 13 101091595 101209088 - MGP_CBAJ_P0037433 Cmya5 protein_coding protein_coding MGP_CBAJ_T0036893.1 MGP_CBAJ_G0020337.1 mouse_genomes_project 13 61810518 61818265 + MGP_CBAJ_P0036893 Idnk protein_coding protein_coding MGP_CBAJ_T0036894.1 MGP_CBAJ_G0020337.1 mouse_genomes_project 13 61810518 61818265 + MGP_CBAJ_P0036894 Idnk protein_coding protein_coding MGP_CBAJ_T0098796.1 MGP_CBAJ_G0037051.1 mouse_genomes_project 13 22715576 22715680 + Gm22452 snRNA snRNA MGP_CBAJ_T0036283.1 MGP_CBAJ_G0020129.1 mouse_genomes_project 13 31782929 31786129 - MGP_CBAJ_P0036283 A530084C06Rik protein_coding protein_coding MGP_CBAJ_T0006445.1 MGP_CBAJ_G0005345.1 mouse_genomes_project 13 31791622 31804572 + Gm11377 lincRNA lincRNA MGP_CBAJ_T0017086.1 MGP_CBAJ_G0014986.1 mouse_genomes_project 13 20672694 20674254 + Gm11291 processed_transcript processed_transcript MGP_CBAJ_T0036999.1 MGP_CBAJ_G0020375.1 mouse_genomes_project 13 67520815 67841220 + MGP_CBAJ_P0036999 2010111I01Rik protein_coding protein_coding MGP_CBAJ_T0037000.1 MGP_CBAJ_G0020375.1 mouse_genomes_project 13 67520963 67843848 + MGP_CBAJ_P0037000 2010111I01Rik protein_coding protein_coding MGP_CBAJ_T0037001.1 MGP_CBAJ_G0020375.1 mouse_genomes_project 13 67821373 67867841 + MGP_CBAJ_P0037001 2010111I01Rik protein_coding protein_coding MGP_CBAJ_T0035902.1 MGP_CBAJ_G0019937.1 mouse_genomes_project 13 8907886 9506250 - MGP_CBAJ_P0035902 Ryr2 protein_coding unknown_likely_coding MGP_CBAJ_T0035903.1 MGP_CBAJ_G0019937.1 mouse_genomes_project 13 8907896 9506749 - MGP_CBAJ_P0035903 Ryr2 protein_coding protein_coding MGP_CBAJ_T0035904.1 MGP_CBAJ_G0019937.1 mouse_genomes_project 13 8907896 9506749 - MGP_CBAJ_P0035904 Ryr2 protein_coding protein_coding MGP_CBAJ_T0037331.1 MGP_CBAJ_G0020497.1 mouse_genomes_project 13 91156192 91243934 + MGP_CBAJ_P0037331 Tmem161b protein_coding protein_coding MGP_CBAJ_T0036313.1 MGP_CBAJ_G0020146.1 mouse_genomes_project 13 33695665 33778267 + MGP_CBAJ_P0036313 protein_coding protein_coding MGP_CBAJ_T0036567.1 MGP_CBAJ_G0020240.1 mouse_genomes_project 13 51654077 51662837 + MGP_CBAJ_P0036567 Ninj1 protein_coding protein_coding MGP_CBAJ_T0036568.1 MGP_CBAJ_G0020240.1 mouse_genomes_project 13 51654117 51662837 + MGP_CBAJ_P0036568 Ninj1 protein_coding protein_coding MGP_CBAJ_T0036569.1 MGP_CBAJ_G0020240.1 mouse_genomes_project 13 51654128 51662352 + MGP_CBAJ_P0036569 Ninj1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036570.1 MGP_CBAJ_G0020240.1 mouse_genomes_project 13 51654359 51661517 + Ninj1 protein_coding processed_transcript MGP_CBAJ_T0036571.1 MGP_CBAJ_G0020240.1 mouse_genomes_project 13 51656888 51662837 + Ninj1 protein_coding processed_transcript MGP_CBAJ_T0098276.1 MGP_CBAJ_G0036545.1 mouse_genomes_project 13 44709996 44716935 + Gm15809 sense_intronic sense_intronic MGP_CBAJ_T0037808.1 MGP_CBAJ_G0020641.1 mouse_genomes_project 13 123405702 123483090 + MGP_CBAJ_P0037808 Plpp1 protein_coding protein_coding MGP_CBAJ_T0037809.1 MGP_CBAJ_G0020641.1 mouse_genomes_project 13 123405731 123482856 + MGP_CBAJ_P0037809 Plpp1 protein_coding protein_coding MGP_CBAJ_T0037246.1 MGP_CBAJ_G0020482.1 mouse_genomes_project 13 82188842 82224994 - MGP_CBAJ_P0037246 Arsk protein_coding protein_coding MGP_CBAJ_T0037247.1 MGP_CBAJ_G0020482.1 mouse_genomes_project 13 82200947 82225006 - Arsk protein_coding retained_intron MGP_CBAJ_T0037466.1 MGP_CBAJ_G0020537.1 mouse_genomes_project 13 103082678 103142931 + MGP_CBAJ_P0037466 Tbca protein_coding protein_coding MGP_CBAJ_T0006462.1 MGP_CBAJ_G0005358.1 mouse_genomes_project 13 45917887 45921872 + Gm5083 lincRNA lincRNA MGP_CBAJ_T0006463.1 MGP_CBAJ_G0005358.1 mouse_genomes_project 13 45918014 45921872 + Gm5083 lincRNA lincRNA MGP_CBAJ_T0036535.1 MGP_CBAJ_G0020230.1 mouse_genomes_project 13 49239142 49252974 - Dek protein_coding processed_transcript MGP_CBAJ_T0036536.1 MGP_CBAJ_G0020230.1 mouse_genomes_project 13 49239149 49260711 - MGP_CBAJ_P0036536 Dek protein_coding protein_coding MGP_CBAJ_T0036537.1 MGP_CBAJ_G0020230.1 mouse_genomes_project 13 49243126 49260722 - MGP_CBAJ_P0036537 Dek protein_coding protein_coding MGP_CBAJ_T0036538.1 MGP_CBAJ_G0020230.1 mouse_genomes_project 13 49252690 49260351 - MGP_CBAJ_P0036538 Dek protein_coding protein_coding MGP_CBAJ_T0036539.1 MGP_CBAJ_G0020230.1 mouse_genomes_project 13 49256011 49260675 - Dek protein_coding processed_transcript MGP_CBAJ_T0036540.1 MGP_CBAJ_G0020230.1 mouse_genomes_project 13 49259906 49260704 - Dek protein_coding processed_transcript MGP_CBAJ_T0000849.1 MGP_CBAJ_G0000784.1 mouse_genomes_project 13 72480492 72482323 + TEC TEC MGP_CBAJ_T0036515.1 MGP_CBAJ_G0020225.1 mouse_genomes_project 13 48790338 48842527 - MGP_CBAJ_P0036515 Nup153 protein_coding protein_coding MGP_CBAJ_T0036516.1 MGP_CBAJ_G0020225.1 mouse_genomes_project 13 48791508 48792386 - Nup153 protein_coding retained_intron MGP_CBAJ_T0036517.1 MGP_CBAJ_G0020225.1 mouse_genomes_project 13 48793278 48794448 - Nup153 protein_coding retained_intron MGP_CBAJ_T0036518.1 MGP_CBAJ_G0020225.1 mouse_genomes_project 13 48810054 48815309 - Nup153 protein_coding retained_intron MGP_CBAJ_T0036519.1 MGP_CBAJ_G0020225.1 mouse_genomes_project 13 48824509 48831855 - Nup153 protein_coding processed_transcript MGP_CBAJ_T0036829.1 MGP_CBAJ_G0020311.1 mouse_genomes_project 13 58855254 58861355 - MGP_CBAJ_P0036829 Ddx41 protein_coding protein_coding MGP_CBAJ_T0098809.1 MGP_CBAJ_G0037064.1 mouse_genomes_project 13 49046368 49046472 + Gm22960 snRNA snRNA MGP_CBAJ_T0036842.1 MGP_CBAJ_G0020317.1 mouse_genomes_project 13 59050593 59060860 + MGP_CBAJ_P0036842 B230219D22Rik protein_coding protein_coding MGP_CBAJ_T0036406.1 MGP_CBAJ_G0020179.1 mouse_genomes_project 13 39135762 39160206 + MGP_CBAJ_P0036406 Riok1 protein_coding protein_coding MGP_CBAJ_T0037147.1 MGP_CBAJ_G0020439.1 mouse_genomes_project 13 75025675 75062716 - MGP_CBAJ_P0037147 Srd5a1 protein_coding protein_coding MGP_CBAJ_T0037148.1 MGP_CBAJ_G0020439.1 mouse_genomes_project 13 75045329 75062622 - Srd5a1 protein_coding processed_transcript MGP_CBAJ_T0037204.1 MGP_CBAJ_G0020463.1 mouse_genomes_project 13 79835087 79857043 + Tppp protein_coding processed_transcript MGP_CBAJ_T0037205.1 MGP_CBAJ_G0020463.1 mouse_genomes_project 13 79835099 79861425 + MGP_CBAJ_P0037205 Tppp protein_coding protein_coding MGP_CBAJ_T0037206.1 MGP_CBAJ_G0020463.1 mouse_genomes_project 13 79835113 79847138 + Tppp protein_coding retained_intron MGP_CBAJ_T0037207.1 MGP_CBAJ_G0020463.1 mouse_genomes_project 13 79856421 79859271 + Tppp protein_coding processed_transcript MGP_CBAJ_T0036426.1 MGP_CBAJ_G0020190.1 mouse_genomes_project 13 42307361 42429424 + MGP_CBAJ_P0036426 Gcnt2 protein_coding protein_coding MGP_CBAJ_T0036427.1 MGP_CBAJ_G0020190.1 mouse_genomes_project 13 42337676 42429424 + MGP_CBAJ_P0036427 Gcnt2 protein_coding protein_coding MGP_CBAJ_T0036428.1 MGP_CBAJ_G0020190.1 mouse_genomes_project 13 42373590 42429424 + MGP_CBAJ_P0036428 Gcnt2 protein_coding protein_coding MGP_CBAJ_T0035796.1 MGP_CBAJ_G0019903.1 mouse_genomes_project 13 109868 138753 + MGP_CBAJ_P0035796 Gdi2 protein_coding protein_coding MGP_CBAJ_T0006542.1 MGP_CBAJ_G0005412.1 mouse_genomes_project 13 121929174 121970442 - Gm15290 lincRNA lincRNA MGP_CBAJ_T0036848.1 MGP_CBAJ_G0020321.1 mouse_genomes_project 13 59195228 59201599 - MGP_CBAJ_P0036848 Pitx1 protein_coding protein_coding MGP_CBAJ_T0036849.1 MGP_CBAJ_G0020321.1 mouse_genomes_project 13 59198652 59210985 - MGP_CBAJ_P0036849 Pitx1 protein_coding protein_coding MGP_CBAJ_T0037682.1 MGP_CBAJ_G0020605.1 mouse_genomes_project 13 113637600 113659617 + MGP_CBAJ_P0037682 Sgtb protein_coding protein_coding MGP_CBAJ_T0037683.1 MGP_CBAJ_G0020605.1 mouse_genomes_project 13 113637649 113670562 + MGP_CBAJ_P0037683 Sgtb protein_coding protein_coding MGP_CBAJ_T0100071.1 MGP_CBAJ_G0038326.1 mouse_genomes_project 13 82780096 82780228 - Gm24519 snoRNA snoRNA MGP_CBAJ_T0036974.1 MGP_CBAJ_G0020355.1 mouse_genomes_project 13 64095208 64096210 + MGP_CBAJ_P0036974 Gm5084 protein_coding protein_coding MGP_CBAJ_T0036030.1 MGP_CBAJ_G0019988.1 mouse_genomes_project 13 20079828 20082975 - MGP_CBAJ_P0036030 Gm10065 protein_coding protein_coding MGP_CBAJ_T0036622.1 MGP_CBAJ_G0020261.1 mouse_genomes_project 13 54473869 54509018 + MGP_CBAJ_P0036622 Secisbp2 protein_coding protein_coding MGP_CBAJ_T0036623.1 MGP_CBAJ_G0020261.1 mouse_genomes_project 13 54473913 54488293 + MGP_CBAJ_P0036623 Secisbp2 protein_coding protein_coding MGP_CBAJ_T0036624.1 MGP_CBAJ_G0020261.1 mouse_genomes_project 13 54473969 54479284 + Secisbp2 protein_coding processed_transcript MGP_CBAJ_T0036625.1 MGP_CBAJ_G0020261.1 mouse_genomes_project 13 54473969 54487382 + Secisbp2 protein_coding processed_transcript MGP_CBAJ_T0036626.1 MGP_CBAJ_G0020261.1 mouse_genomes_project 13 54504706 54507503 + Secisbp2 protein_coding retained_intron MGP_CBAJ_T0036627.1 MGP_CBAJ_G0020261.1 mouse_genomes_project 13 54506746 54508463 + Secisbp2 protein_coding retained_intron MGP_CBAJ_T0036218.1 MGP_CBAJ_G0020097.1 mouse_genomes_project 13 26553786 26590539 + MGP_CBAJ_P0036218 protein_coding protein_coding MGP_CBAJ_T0036219.1 MGP_CBAJ_G0020097.1 mouse_genomes_project 13 26553827 26590475 + MGP_CBAJ_P0036219 protein_coding protein_coding MGP_CBAJ_T0003366.1 MGP_CBAJ_G0003091.1 mouse_genomes_project 13 23905104 23910313 + 1700016G14Rik antisense antisense MGP_CBAJ_T0037359.1 MGP_CBAJ_G0020502.1 mouse_genomes_project 13 97210589 97290014 + MGP_CBAJ_P0037359 Hapln1 protein_coding protein_coding MGP_CBAJ_T0037141.1 MGP_CBAJ_G0020436.1 mouse_genomes_project 13 73960902 74389021 - MGP_CBAJ_P0037141 Adcy2 protein_coding protein_coding MGP_CBAJ_T0036808.1 MGP_CBAJ_G0020308.1 mouse_genomes_project 13 58792109 58813006 - MGP_CBAJ_P0036808 Dbn1 protein_coding protein_coding MGP_CBAJ_T0036809.1 MGP_CBAJ_G0020308.1 mouse_genomes_project 13 58792632 58805201 - MGP_CBAJ_P0036809 Dbn1 protein_coding protein_coding MGP_CBAJ_T0036810.1 MGP_CBAJ_G0020308.1 mouse_genomes_project 13 58793813 58805201 - Dbn1 protein_coding retained_intron MGP_CBAJ_T0036811.1 MGP_CBAJ_G0020308.1 mouse_genomes_project 13 58800087 58803903 - Dbn1 protein_coding retained_intron MGP_CBAJ_T0036812.1 MGP_CBAJ_G0020308.1 mouse_genomes_project 13 58800109 58804016 - Dbn1 protein_coding retained_intron MGP_CBAJ_T0036813.1 MGP_CBAJ_G0020308.1 mouse_genomes_project 13 58803308 58809466 - MGP_CBAJ_P0036813 Dbn1 protein_coding protein_coding MGP_CBAJ_T0036814.1 MGP_CBAJ_G0020308.1 mouse_genomes_project 13 58803425 58808491 - Dbn1 protein_coding processed_transcript MGP_CBAJ_T0036815.1 MGP_CBAJ_G0020308.1 mouse_genomes_project 13 58804038 58805728 - Dbn1 protein_coding retained_intron MGP_CBAJ_T0012700.1 MGP_CBAJ_G0010812.1 mouse_genomes_project 13 7507 8292 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0036993.1 MGP_CBAJ_G0020371.1 mouse_genomes_project 13 65567880 65573377 - MGP_CBAJ_P0036993 Cts3 protein_coding protein_coding MGP_CBAJ_T0100052.1 MGP_CBAJ_G0038307.1 mouse_genomes_project 13 31639413 31639538 + Gm23351 snoRNA snoRNA MGP_CBAJ_T0000866.1 MGP_CBAJ_G0000801.1 mouse_genomes_project 13 111492393 111494327 - TEC TEC MGP_CBAJ_T0036591.1 MGP_CBAJ_G0020250.1 mouse_genomes_project 13 52125061 52141489 + MGP_CBAJ_P0036591 Ogn protein_coding protein_coding MGP_CBAJ_T0003419.1 MGP_CBAJ_G0003123.1 mouse_genomes_project 13 101860428 101873600 - AW495222 antisense antisense MGP_CBAJ_T0003420.1 MGP_CBAJ_G0003123.1 mouse_genomes_project 13 101869647 101873559 - AW495222 antisense antisense MGP_CBAJ_T0037062.1 MGP_CBAJ_G0020396.1 mouse_genomes_project 13 70001981 70003269 + MGP_CBAJ_P0037062 Gm10775 protein_coding protein_coding MGP_CBAJ_T0036572.1 MGP_CBAJ_G0020241.1 mouse_genomes_project 13 51669543 51682664 - MGP_CBAJ_P0036572 Card19 protein_coding protein_coding MGP_CBAJ_T0012747.1 MGP_CBAJ_G0010859.1 mouse_genomes_project 13 30847202 30847462 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0035954.1 MGP_CBAJ_G0019958.1 mouse_genomes_project 13 12603242 12611226 + MGP_CBAJ_P0035954 AW209491 protein_coding protein_coding MGP_CBAJ_T0035955.1 MGP_CBAJ_G0019958.1 mouse_genomes_project 13 12603255 12611226 + MGP_CBAJ_P0035955 AW209491 protein_coding protein_coding MGP_CBAJ_T0037135.1 MGP_CBAJ_G0020431.1 mouse_genomes_project 13 73032566 73044453 + MGP_CBAJ_P0037135 Gm10037 protein_coding protein_coding MGP_CBAJ_T0037097.1 MGP_CBAJ_G0020411.1 mouse_genomes_project 13 72300010 72322771 - MGP_CBAJ_P0037097 Zfp595 protein_coding protein_coding MGP_CBAJ_T0006473.1 MGP_CBAJ_G0005365.1 mouse_genomes_project 13 50907583 50909883 - 6720427I07Rik lincRNA lincRNA MGP_CBAJ_T0036237.1 MGP_CBAJ_G0020107.1 mouse_genomes_project 13 27164640 27176235 - MGP_CBAJ_P0036237 Prl8a1 protein_coding protein_coding MGP_CBAJ_T0036238.1 MGP_CBAJ_G0020107.1 mouse_genomes_project 13 27165150 27176235 - MGP_CBAJ_P0036238 Prl8a1 protein_coding protein_coding MGP_CBAJ_T0006415.1 MGP_CBAJ_G0005323.1 mouse_genomes_project 13 2597660 2600243 - 1700016G22Rik lincRNA lincRNA MGP_CBAJ_T0006416.1 MGP_CBAJ_G0005323.1 mouse_genomes_project 13 2597660 2599863 - 1700016G22Rik lincRNA lincRNA MGP_CBAJ_T0036121.1 MGP_CBAJ_G0020055.1 mouse_genomes_project 13 22614484 22615626 + MGP_CBAJ_P0036121 Hist1h3d protein_coding protein_coding MGP_CBAJ_T0009811.1 MGP_CBAJ_G0007949.1 mouse_genomes_project 13 50910239 50910333 - Mirlet7a-1 miRNA miRNA MGP_CBAJ_T0036144.1 MGP_CBAJ_G0020074.1 mouse_genomes_project 13 22889333 22905747 + Slc17a2 protein_coding retained_intron MGP_CBAJ_T0036145.1 MGP_CBAJ_G0020074.1 mouse_genomes_project 13 22889367 22907522 + MGP_CBAJ_P0036145 Slc17a2 protein_coding protein_coding MGP_CBAJ_T0036146.1 MGP_CBAJ_G0020074.1 mouse_genomes_project 13 22889385 22905518 + Slc17a2 protein_coding retained_intron MGP_CBAJ_T0036147.1 MGP_CBAJ_G0020074.1 mouse_genomes_project 13 22889388 22905099 + MGP_CBAJ_P0036147 Slc17a2 protein_coding protein_coding MGP_CBAJ_T0037268.1 MGP_CBAJ_G0020488.1 mouse_genomes_project 13 84294160 84295553 + MGP_CBAJ_P0037268 Pou5f2 protein_coding protein_coding MGP_CBAJ_T0012704.1 MGP_CBAJ_G0010816.1 mouse_genomes_project 13 6269281 6269432 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0035910.1 MGP_CBAJ_G0019941.1 mouse_genomes_project 13 9879296 9900328 - MGP_CBAJ_P0035910 Lgals8 protein_coding protein_coding MGP_CBAJ_T0035911.1 MGP_CBAJ_G0019941.1 mouse_genomes_project 13 9879301 9888109 - Lgals8 protein_coding retained_intron MGP_CBAJ_T0035912.1 MGP_CBAJ_G0019941.1 mouse_genomes_project 13 9880729 9900378 - MGP_CBAJ_P0035912 Lgals8 protein_coding protein_coding MGP_CBAJ_T0035913.1 MGP_CBAJ_G0019941.1 mouse_genomes_project 13 9890284 9895391 - Lgals8 protein_coding retained_intron MGP_CBAJ_T0035914.1 MGP_CBAJ_G0019941.1 mouse_genomes_project 13 9891605 9893882 - Lgals8 protein_coding retained_intron MGP_CBAJ_T0035915.1 MGP_CBAJ_G0019941.1 mouse_genomes_project 13 9898153 9899930 - Lgals8 protein_coding processed_transcript MGP_CBAJ_T0036149.1 MGP_CBAJ_G0020076.1 mouse_genomes_project 13 22951871 22958861 + MGP_CBAJ_P0036149 Slc17a1 protein_coding protein_coding MGP_CBAJ_T0036150.1 MGP_CBAJ_G0020076.1 mouse_genomes_project 13 22952128 22981402 + MGP_CBAJ_P0036150 Slc17a1 protein_coding protein_coding MGP_CBAJ_T0036151.1 MGP_CBAJ_G0020076.1 mouse_genomes_project 13 22954416 22960674 + Slc17a1 protein_coding processed_transcript MGP_CBAJ_T0012770.1 MGP_CBAJ_G0010882.1 mouse_genomes_project 13 74741279 74742275 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0037724.1 MGP_CBAJ_G0020620.1 mouse_genomes_project 13 116784562 116853379 - MGP_CBAJ_P0037724 Kif2a protein_coding protein_coding MGP_CBAJ_T0037725.1 MGP_CBAJ_G0020620.1 mouse_genomes_project 13 116787701 116853375 - MGP_CBAJ_P0037725 Kif2a protein_coding protein_coding MGP_CBAJ_T0037726.1 MGP_CBAJ_G0020620.1 mouse_genomes_project 13 116788293 116853387 - MGP_CBAJ_P0037726 Kif2a protein_coding protein_coding MGP_CBAJ_T0037727.1 MGP_CBAJ_G0020620.1 mouse_genomes_project 13 116788562 116828029 - MGP_CBAJ_P0037727 Kif2a protein_coding protein_coding MGP_CBAJ_T0037728.1 MGP_CBAJ_G0020620.1 mouse_genomes_project 13 116790196 116853288 - MGP_CBAJ_P0037728 Kif2a protein_coding protein_coding MGP_CBAJ_T0037729.1 MGP_CBAJ_G0020620.1 mouse_genomes_project 13 116796718 116808365 - MGP_CBAJ_P0037729 Kif2a protein_coding nonsense_mediated_decay MGP_CBAJ_T0037730.1 MGP_CBAJ_G0020620.1 mouse_genomes_project 13 116810978 116853010 - MGP_CBAJ_P0037730 Kif2a protein_coding nonsense_mediated_decay MGP_CBAJ_T0037731.1 MGP_CBAJ_G0020620.1 mouse_genomes_project 13 116818573 116825193 - MGP_CBAJ_P0037731 Kif2a protein_coding protein_coding MGP_CBAJ_T0101621.1 MGP_CBAJ_G0039652.1 mouse_genomes_project 13 34227245 34227404 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0006504.1 MGP_CBAJ_G0005385.1 mouse_genomes_project 13 85725005 85739148 + Gm29318 lincRNA lincRNA MGP_CBAJ_T0037514.1 MGP_CBAJ_G0020555.1 mouse_genomes_project 13 105060554 105170765 + MGP_CBAJ_P0037514 Col4a3bp protein_coding protein_coding MGP_CBAJ_T0037515.1 MGP_CBAJ_G0020555.1 mouse_genomes_project 13 105060671 105172920 + MGP_CBAJ_P0037515 Col4a3bp protein_coding protein_coding MGP_CBAJ_T0037516.1 MGP_CBAJ_G0020555.1 mouse_genomes_project 13 105060671 105172920 + MGP_CBAJ_P0037516 Col4a3bp protein_coding protein_coding MGP_CBAJ_T0036194.1 MGP_CBAJ_G0020086.1 mouse_genomes_project 13 23995810 24009858 - MGP_CBAJ_P0036194 Acot13 protein_coding protein_coding MGP_CBAJ_T0036362.1 MGP_CBAJ_G0020165.1 mouse_genomes_project 13 35630881 35699018 + MGP_CBAJ_P0036362 4933417A18Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0036363.1 MGP_CBAJ_G0020165.1 mouse_genomes_project 13 35630881 35696340 + MGP_CBAJ_P0036363 4933417A18Rik protein_coding protein_coding MGP_CBAJ_T0009825.1 MGP_CBAJ_G0007963.1 mouse_genomes_project 13 67842275 67842348 + Mir27b miRNA miRNA MGP_CBAJ_T0037302.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90361322 90533856 + MGP_CBAJ_P0037302 Mef2c protein_coding protein_coding MGP_CBAJ_T0037303.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90361494 90534199 + MGP_CBAJ_P0037303 Mef2c protein_coding protein_coding MGP_CBAJ_T0037304.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90361528 90462754 + MGP_CBAJ_P0037304 Mef2c protein_coding protein_coding MGP_CBAJ_T0037305.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90361528 90537588 + MGP_CBAJ_P0037305 Mef2c protein_coding protein_coding MGP_CBAJ_T0037306.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90361528 90462820 + MGP_CBAJ_P0037306 Mef2c protein_coding protein_coding MGP_CBAJ_T0037307.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90361528 90537588 + MGP_CBAJ_P0037307 Mef2c protein_coding protein_coding MGP_CBAJ_T0037308.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90387157 90495164 + MGP_CBAJ_P0037308 Mef2c protein_coding protein_coding MGP_CBAJ_T0037309.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90390472 90502906 + MGP_CBAJ_P0037309 Mef2c protein_coding protein_coding MGP_CBAJ_T0037310.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90390963 90397061 + Mef2c protein_coding retained_intron MGP_CBAJ_T0037311.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90391020 90534971 + MGP_CBAJ_P0037311 Mef2c protein_coding protein_coding MGP_CBAJ_T0037312.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90391021 90495306 + MGP_CBAJ_P0037312 Mef2c protein_coding protein_coding MGP_CBAJ_T0037313.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90391027 90534206 + MGP_CBAJ_P0037313 Mef2c protein_coding protein_coding MGP_CBAJ_T0037314.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90391057 90523055 + MGP_CBAJ_P0037314 Mef2c protein_coding protein_coding MGP_CBAJ_T0037315.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90391086 90503658 + Mef2c protein_coding retained_intron MGP_CBAJ_T0037316.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90397849 90495155 + MGP_CBAJ_P0037316 Mef2c protein_coding protein_coding MGP_CBAJ_T0037317.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90442076 90505224 + MGP_CBAJ_P0037317 Mef2c protein_coding protein_coding MGP_CBAJ_T0037318.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90442109 90495343 + MGP_CBAJ_P0037318 Mef2c protein_coding protein_coding MGP_CBAJ_T0037319.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90443335 90537590 + MGP_CBAJ_P0037319 Mef2c protein_coding protein_coding MGP_CBAJ_T0037320.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90443346 90448226 + Mef2c protein_coding retained_intron MGP_CBAJ_T0037321.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90443350 90534984 + MGP_CBAJ_P0037321 Mef2c protein_coding protein_coding MGP_CBAJ_T0037322.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90443353 90503007 + MGP_CBAJ_P0037322 Mef2c protein_coding protein_coding MGP_CBAJ_T0037323.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90444873 90523008 + MGP_CBAJ_P0037323 Mef2c protein_coding protein_coding MGP_CBAJ_T0037324.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90444938 90502932 + MGP_CBAJ_P0037324 Mef2c protein_coding protein_coding MGP_CBAJ_T0037325.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90445405 90537590 + MGP_CBAJ_P0037325 Mef2c protein_coding protein_coding MGP_CBAJ_T0037326.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90445405 90533145 + MGP_CBAJ_P0037326 Mef2c protein_coding protein_coding MGP_CBAJ_T0037327.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90445405 90533145 + MGP_CBAJ_P0037327 Mef2c protein_coding protein_coding MGP_CBAJ_T0037328.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90495373 90533250 + MGP_CBAJ_P0037328 Mef2c protein_coding protein_coding MGP_CBAJ_T0037329.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90502831 90525686 + MGP_CBAJ_P0037329 Mef2c protein_coding nonsense_mediated_decay MGP_CBAJ_T0037330.1 MGP_CBAJ_G0020496.1 mouse_genomes_project 13 90523032 90533253 + MGP_CBAJ_P0037330 Mef2c protein_coding protein_coding MGP_CBAJ_T0036919.1 MGP_CBAJ_G0020343.1 mouse_genomes_project 13 62074479 62083037 + MGP_CBAJ_P0036919 Rmi1 protein_coding protein_coding MGP_CBAJ_T0037332.1 MGP_CBAJ_G0020498.1 mouse_genomes_project 13 92183276 92210986 + MGP_CBAJ_P0037332 Ccnh protein_coding protein_coding MGP_CBAJ_T0037333.1 MGP_CBAJ_G0020498.1 mouse_genomes_project 13 92183303 92199830 + MGP_CBAJ_P0037333 Ccnh protein_coding protein_coding MGP_CBAJ_T0037334.1 MGP_CBAJ_G0020498.1 mouse_genomes_project 13 92183316 92209832 + MGP_CBAJ_P0037334 Ccnh protein_coding protein_coding MGP_CBAJ_T0037335.1 MGP_CBAJ_G0020498.1 mouse_genomes_project 13 92183345 92210131 + MGP_CBAJ_P0037335 Ccnh protein_coding protein_coding MGP_CBAJ_T0037336.1 MGP_CBAJ_G0020498.1 mouse_genomes_project 13 92199817 92220755 + MGP_CBAJ_P0037336 Ccnh protein_coding protein_coding MGP_CBAJ_T0037337.1 MGP_CBAJ_G0020498.1 mouse_genomes_project 13 92208542 92210330 + Ccnh protein_coding processed_transcript MGP_CBAJ_T0037338.1 MGP_CBAJ_G0020498.1 mouse_genomes_project 13 92209004 92210126 + Ccnh protein_coding retained_intron MGP_CBAJ_T0006467.1 MGP_CBAJ_G0005361.1 mouse_genomes_project 13 47986744 47988000 + 5033430I15Rik lincRNA lincRNA MGP_CBAJ_T0006468.1 MGP_CBAJ_G0005361.1 mouse_genomes_project 13 47986842 47987669 + 5033430I15Rik lincRNA lincRNA MGP_CBAJ_T0012744.1 MGP_CBAJ_G0010856.1 mouse_genomes_project 13 30185468 30185591 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012717.1 MGP_CBAJ_G0010829.1 mouse_genomes_project 13 20769742 20770023 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012746.1 MGP_CBAJ_G0010858.1 mouse_genomes_project 13 30497184 30497502 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0035941.1 MGP_CBAJ_G0019954.1 mouse_genomes_project 13 11964470 12040068 + Arid4b protein_coding processed_transcript MGP_CBAJ_T0035942.1 MGP_CBAJ_G0019954.1 mouse_genomes_project 13 11965022 12090339 + MGP_CBAJ_P0035942 Arid4b protein_coding protein_coding MGP_CBAJ_T0035943.1 MGP_CBAJ_G0019954.1 mouse_genomes_project 13 11965023 12126769 + MGP_CBAJ_P0035943 Arid4b protein_coding protein_coding MGP_CBAJ_T0035944.1 MGP_CBAJ_G0019954.1 mouse_genomes_project 13 11965030 12126764 + MGP_CBAJ_P0035944 Arid4b protein_coding protein_coding MGP_CBAJ_T0035945.1 MGP_CBAJ_G0019954.1 mouse_genomes_project 13 11965030 12127005 + MGP_CBAJ_P0035945 Arid4b protein_coding protein_coding MGP_CBAJ_T0035946.1 MGP_CBAJ_G0019954.1 mouse_genomes_project 13 11965037 12086061 + MGP_CBAJ_P0035946 Arid4b protein_coding protein_coding MGP_CBAJ_T0035947.1 MGP_CBAJ_G0019954.1 mouse_genomes_project 13 11965293 12034720 + Arid4b protein_coding processed_transcript MGP_CBAJ_T0035948.1 MGP_CBAJ_G0019954.1 mouse_genomes_project 13 12090357 12121127 + MGP_CBAJ_P0035948 Arid4b protein_coding protein_coding MGP_CBAJ_T0035949.1 MGP_CBAJ_G0019954.1 mouse_genomes_project 13 12102250 12118636 + Arid4b protein_coding processed_transcript MGP_CBAJ_T0035950.1 MGP_CBAJ_G0019954.1 mouse_genomes_project 13 12118578 12125156 + Arid4b protein_coding processed_transcript MGP_CBAJ_T0037861.1 MGP_CBAJ_G0020670.1 mouse_genomes_project 13 130738401 130842154 - MGP_CBAJ_P0037861 Nnt protein_coding protein_coding MGP_CBAJ_T0037862.1 MGP_CBAJ_G0020670.1 mouse_genomes_project 13 130738401 130842154 - MGP_CBAJ_P0037862 Nnt protein_coding protein_coding MGP_CBAJ_T0037863.1 MGP_CBAJ_G0020670.1 mouse_genomes_project 13 130738475 130842087 - MGP_CBAJ_P0037863 Nnt protein_coding unknown_likely_coding MGP_CBAJ_T0037864.1 MGP_CBAJ_G0020670.1 mouse_genomes_project 13 130763750 130842154 - MGP_CBAJ_P0037864 Nnt protein_coding protein_coding MGP_CBAJ_T0037865.1 MGP_CBAJ_G0020670.1 mouse_genomes_project 13 130820309 130842154 - Nnt protein_coding processed_transcript MGP_CBAJ_T0037866.1 MGP_CBAJ_G0020670.1 mouse_genomes_project 13 130826286 130842154 - Nnt protein_coding processed_transcript MGP_CBAJ_T0006530.1 MGP_CBAJ_G0005401.1 mouse_genomes_project 13 107248939 107259704 - 2310005E17Rik lincRNA lincRNA MGP_CBAJ_T0036171.1 MGP_CBAJ_G0020082.1 mouse_genomes_project 13 23487712 23589995 + MGP_CBAJ_P0036171 Cmah protein_coding protein_coding MGP_CBAJ_T0036172.1 MGP_CBAJ_G0020082.1 mouse_genomes_project 13 23506318 23552444 + Cmah protein_coding processed_transcript MGP_CBAJ_T0036173.1 MGP_CBAJ_G0020082.1 mouse_genomes_project 13 23527782 23552003 + Cmah protein_coding processed_transcript MGP_CBAJ_T0036174.1 MGP_CBAJ_G0020082.1 mouse_genomes_project 13 23528105 23553413 + Cmah protein_coding processed_transcript MGP_CBAJ_T0036044.1 MGP_CBAJ_G0019997.1 mouse_genomes_project 13 20275547 20276501 - MGP_CBAJ_P0036044 Olfr1361 protein_coding protein_coding MGP_CBAJ_T0036361.1 MGP_CBAJ_G0020164.1 mouse_genomes_project 13 35616393 35626425 - MGP_CBAJ_P0036361 Fam217a protein_coding protein_coding MGP_CBAJ_T0036472.1 MGP_CBAJ_G0020206.1 mouse_genomes_project 13 44863072 44884016 - MGP_CBAJ_P0036472 Tbc1d7 protein_coding protein_coding MGP_CBAJ_T0036473.1 MGP_CBAJ_G0020206.1 mouse_genomes_project 13 44863072 44884016 - MGP_CBAJ_P0036473 Tbc1d7 protein_coding protein_coding MGP_CBAJ_T0037511.1 MGP_CBAJ_G0020553.1 mouse_genomes_project 13 104992962 105060422 - MGP_CBAJ_P0037511 Polk protein_coding protein_coding MGP_CBAJ_T0037512.1 MGP_CBAJ_G0020553.1 mouse_genomes_project 13 104994447 105030787 - MGP_CBAJ_P0037512 Polk protein_coding protein_coding MGP_CBAJ_T0003378.1 MGP_CBAJ_G0003101.1 mouse_genomes_project 13 51301593 51305934 + Phf2os1 antisense antisense MGP_CBAJ_T0037805.1 MGP_CBAJ_G0020639.1 mouse_genomes_project 13 123173256 123233755 - MGP_CBAJ_P0037805 Ddx4 protein_coding protein_coding MGP_CBAJ_T0037806.1 MGP_CBAJ_G0020639.1 mouse_genomes_project 13 123173256 123233755 - MGP_CBAJ_P0037806 Ddx4 protein_coding protein_coding MGP_CBAJ_T0000869.1 MGP_CBAJ_G0000804.1 mouse_genomes_project 13 127365277 127368197 + TEC TEC MGP_CBAJ_T0037059.1 MGP_CBAJ_G0020393.1 mouse_genomes_project 13 69859438 69860386 + MGP_CBAJ_P0037059 Olfr465-ps1 protein_coding protein_coding MGP_CBAJ_T0037199.1 MGP_CBAJ_G0020459.1 mouse_genomes_project 13 79715967 79751590 - MGP_CBAJ_P0037199 Trip13 protein_coding protein_coding MGP_CBAJ_T0098277.1 MGP_CBAJ_G0036546.1 mouse_genomes_project 13 67924299 67934069 - sense_intronic sense_intronic MGP_CBAJ_T0037098.1 MGP_CBAJ_G0020412.1 mouse_genomes_project 13 72303531 72350782 - MGP_CBAJ_P0037098 Gm28044 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037099.1 MGP_CBAJ_G0020412.1 mouse_genomes_project 13 72308067 72338705 - Gm28044 protein_coding processed_transcript MGP_CBAJ_T0036316.1 MGP_CBAJ_G0020149.1 mouse_genomes_project 13 34254766 34264975 + MGP_CBAJ_P0036316 Serpinb6d protein_coding protein_coding MGP_CBAJ_T0036543.1 MGP_CBAJ_G0020232.1 mouse_genomes_project 13 50600572 50603181 + MGP_CBAJ_P0036543 Id4 protein_coding protein_coding MGP_CBAJ_T0009828.1 MGP_CBAJ_G0007966.1 mouse_genomes_project 13 76715130 76715251 + Mir466f-4 miRNA miRNA MGP_CBAJ_T0009807.1 MGP_CBAJ_G0007945.1 mouse_genomes_project 13 42312381 42312453 + Mir5124a miRNA miRNA MGP_CBAJ_T0036530.1 MGP_CBAJ_G0020229.1 mouse_genomes_project 13 49194835 49238968 + MGP_CBAJ_P0036530 Kdm1b protein_coding protein_coding MGP_CBAJ_T0036531.1 MGP_CBAJ_G0020229.1 mouse_genomes_project 13 49194906 49208139 + MGP_CBAJ_P0036531 Kdm1b protein_coding protein_coding MGP_CBAJ_T0036532.1 MGP_CBAJ_G0020229.1 mouse_genomes_project 13 49195232 49238976 + MGP_CBAJ_P0036532 Kdm1b protein_coding protein_coding MGP_CBAJ_T0036533.1 MGP_CBAJ_G0020229.1 mouse_genomes_project 13 49218520 49226654 + Kdm1b protein_coding retained_intron MGP_CBAJ_T0036534.1 MGP_CBAJ_G0020229.1 mouse_genomes_project 13 49220835 49238981 + Kdm1b protein_coding processed_transcript MGP_CBAJ_T0098789.1 MGP_CBAJ_G0037044.1 mouse_genomes_project 13 11990800 11990907 + Gm26129 snRNA snRNA MGP_CBAJ_T0012752.1 MGP_CBAJ_G0010864.1 mouse_genomes_project 13 34622611 34623977 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0037879.1 MGP_CBAJ_G0020675.1 mouse_genomes_project 13 130940416 130946375 + MGP_CBAJ_P0037879 protein_coding protein_coding MGP_CBAJ_T0036644.1 MGP_CBAJ_G0020265.1 mouse_genomes_project 13 55390980 55418224 - MGP_CBAJ_P0036644 Diras2 protein_coding protein_coding MGP_CBAJ_T0036365.1 MGP_CBAJ_G0020167.1 mouse_genomes_project 13 35731781 35756614 - MGP_CBAJ_P0036365 Eci2 protein_coding protein_coding MGP_CBAJ_T0036366.1 MGP_CBAJ_G0020167.1 mouse_genomes_project 13 35731782 35756597 - MGP_CBAJ_P0036366 Eci2 protein_coding protein_coding MGP_CBAJ_T0036367.1 MGP_CBAJ_G0020167.1 mouse_genomes_project 13 35731783 35756614 - MGP_CBAJ_P0036367 Eci2 protein_coding protein_coding MGP_CBAJ_T0036368.1 MGP_CBAJ_G0020167.1 mouse_genomes_project 13 35731790 35756602 - MGP_CBAJ_P0036368 Eci2 protein_coding protein_coding MGP_CBAJ_T0036369.1 MGP_CBAJ_G0020167.1 mouse_genomes_project 13 35732735 35751578 - Eci2 protein_coding processed_transcript MGP_CBAJ_T0036370.1 MGP_CBAJ_G0020167.1 mouse_genomes_project 13 35734289 35752321 - Eci2 protein_coding processed_transcript MGP_CBAJ_T0036371.1 MGP_CBAJ_G0020167.1 mouse_genomes_project 13 35748651 35751112 - Eci2 protein_coding retained_intron MGP_CBAJ_T0036372.1 MGP_CBAJ_G0020167.1 mouse_genomes_project 13 35748721 35756593 - MGP_CBAJ_P0036372 Eci2 protein_coding protein_coding MGP_CBAJ_T0036373.1 MGP_CBAJ_G0020167.1 mouse_genomes_project 13 35750168 35756592 - MGP_CBAJ_P0036373 Eci2 protein_coding protein_coding MGP_CBAJ_T0101593.1 MGP_CBAJ_G0039624.1 mouse_genomes_project 13 21216191 21221785 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0036667.1 MGP_CBAJ_G0020271.1 mouse_genomes_project 13 56468669 56477056 - MGP_CBAJ_P0036667 Msx2 protein_coding protein_coding MGP_CBAJ_T0036668.1 MGP_CBAJ_G0020271.1 mouse_genomes_project 13 56475487 56477056 - Msx2 protein_coding retained_intron MGP_CBAJ_T0009793.1 MGP_CBAJ_G0007931.1 mouse_genomes_project 13 19984390 19984451 - Mir6942 miRNA miRNA MGP_CBAJ_T0037886.1 MGP_CBAJ_G0020680.1 mouse_genomes_project 13 131218423 131219205 - MGP_CBAJ_P0037886 protein_coding protein_coding MGP_CBAJ_T0036253.1 MGP_CBAJ_G0020117.1 mouse_genomes_project 13 27965963 27975510 + MGP_CBAJ_P0036253 Prl5a1 protein_coding protein_coding MGP_CBAJ_T0100083.1 MGP_CBAJ_G0038338.1 mouse_genomes_project 13 129343105 129343235 + Gm26349 snoRNA snoRNA MGP_CBAJ_T0006498.1 MGP_CBAJ_G0005380.1 mouse_genomes_project 13 72675865 72691290 - lincRNA lincRNA MGP_CBAJ_T0036401.1 MGP_CBAJ_G0020177.1 mouse_genomes_project 13 39060818 39086703 - MGP_CBAJ_P0036401 Ssr1 protein_coding protein_coding MGP_CBAJ_T0037203.1 MGP_CBAJ_G0020462.1 mouse_genomes_project 13 79811556 79811742 - MGP_CBAJ_P0037203 Gm10126 protein_coding protein_coding MGP_CBAJ_T0037050.1 MGP_CBAJ_G0020387.1 mouse_genomes_project 13 69168036 69196158 - MGP_CBAJ_P0037050 1190003K10Rik protein_coding protein_coding MGP_CBAJ_T0037080.1 MGP_CBAJ_G0020401.1 mouse_genomes_project 13 71958449 71981362 - MGP_CBAJ_P0037080 Zfp712 protein_coding protein_coding MGP_CBAJ_T0037042.1 MGP_CBAJ_G0020382.1 mouse_genomes_project 13 68798038 68822505 + MGP_CBAJ_P0037042 Habp4 protein_coding protein_coding MGP_CBAJ_T0003400.1 MGP_CBAJ_G0003114.1 mouse_genomes_project 13 76129332 76134059 + 1700100L14Rik antisense antisense MGP_CBAJ_T0003401.1 MGP_CBAJ_G0003114.1 mouse_genomes_project 13 76129371 76134054 + 1700100L14Rik antisense antisense MGP_CBAJ_T0036926.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63237922 63238614 - Agtpbp1 protein_coding processed_transcript MGP_CBAJ_T0036927.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63237923 63349505 - MGP_CBAJ_P0036927 Agtpbp1 protein_coding protein_coding MGP_CBAJ_T0036928.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63237925 63336204 - MGP_CBAJ_P0036928 Agtpbp1 protein_coding protein_coding MGP_CBAJ_T0036929.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63238265 63361962 - MGP_CBAJ_P0036929 Agtpbp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036930.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63238265 63362245 - MGP_CBAJ_P0036930 Agtpbp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036931.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63244564 63349493 - MGP_CBAJ_P0036931 Agtpbp1 protein_coding protein_coding MGP_CBAJ_T0036932.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63264402 63271887 - Agtpbp1 protein_coding processed_transcript MGP_CBAJ_T0036933.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63271129 63349505 - MGP_CBAJ_P0036933 Agtpbp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036934.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63283919 63349505 - MGP_CBAJ_P0036934 Agtpbp1 protein_coding protein_coding MGP_CBAJ_T0036935.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63283929 63362245 - MGP_CBAJ_P0036935 Agtpbp1 protein_coding protein_coding MGP_CBAJ_T0036936.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63304250 63307077 - Agtpbp1 protein_coding processed_transcript MGP_CBAJ_T0036937.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63305276 63349505 - MGP_CBAJ_P0036937 Agtpbp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036938.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63307088 63337086 - Agtpbp1 protein_coding processed_transcript MGP_CBAJ_T0036939.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63310604 63349505 - MGP_CBAJ_P0036939 Agtpbp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036940.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63331484 63349505 - MGP_CBAJ_P0036940 Agtpbp1 protein_coding protein_coding MGP_CBAJ_T0036941.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63334918 63349505 - MGP_CBAJ_P0036941 Agtpbp1 protein_coding protein_coding MGP_CBAJ_T0036942.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63334918 63366110 - MGP_CBAJ_P0036942 Agtpbp1 protein_coding protein_coding MGP_CBAJ_T0036943.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63334926 63361959 - MGP_CBAJ_P0036943 Agtpbp1 protein_coding protein_coding MGP_CBAJ_T0036944.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63335056 63395089 - MGP_CBAJ_P0036944 Agtpbp1 protein_coding protein_coding MGP_CBAJ_T0036945.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63339264 63362077 - MGP_CBAJ_P0036945 Agtpbp1 protein_coding protein_coding MGP_CBAJ_T0036946.1 MGP_CBAJ_G0020346.1 mouse_genomes_project 13 63390053 63395105 - Agtpbp1 protein_coding processed_transcript MGP_CBAJ_T0037867.1 MGP_CBAJ_G0020671.1 mouse_genomes_project 13 130861595 130900358 + MGP_CBAJ_P0037867 Paip1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037868.1 MGP_CBAJ_G0020671.1 mouse_genomes_project 13 130861609 130900133 + MGP_CBAJ_P0037868 Paip1 protein_coding protein_coding MGP_CBAJ_T0037869.1 MGP_CBAJ_G0020671.1 mouse_genomes_project 13 130861609 130900244 + MGP_CBAJ_P0037869 Paip1 protein_coding protein_coding MGP_CBAJ_T0037870.1 MGP_CBAJ_G0020671.1 mouse_genomes_project 13 130861609 130900396 + MGP_CBAJ_P0037870 Paip1 protein_coding protein_coding MGP_CBAJ_T0037871.1 MGP_CBAJ_G0020671.1 mouse_genomes_project 13 130861634 130893116 + MGP_CBAJ_P0037871 Paip1 protein_coding protein_coding MGP_CBAJ_T0037872.1 MGP_CBAJ_G0020671.1 mouse_genomes_project 13 130873389 130900071 + MGP_CBAJ_P0037872 Paip1 protein_coding protein_coding MGP_CBAJ_T0037873.1 MGP_CBAJ_G0020671.1 mouse_genomes_project 13 130892603 130894127 + Paip1 protein_coding retained_intron MGP_CBAJ_T0003426.1 MGP_CBAJ_G0003126.1 mouse_genomes_project 13 109142000 109143544 - BC001981 antisense antisense MGP_CBAJ_T0003427.1 MGP_CBAJ_G0003126.1 mouse_genomes_project 13 109143240 109143542 - BC001981 antisense antisense MGP_CBAJ_T0098811.1 MGP_CBAJ_G0037066.1 mouse_genomes_project 13 64862564 64862663 + Gm24594 snRNA snRNA MGP_CBAJ_T0035835.1 MGP_CBAJ_G0019925.1 mouse_genomes_project 13 3411243 3420442 - Pfkp protein_coding retained_intron MGP_CBAJ_T0035836.1 MGP_CBAJ_G0019925.1 mouse_genomes_project 13 3411243 3476460 - MGP_CBAJ_P0035836 Pfkp protein_coding protein_coding MGP_CBAJ_T0035837.1 MGP_CBAJ_G0019925.1 mouse_genomes_project 13 3412657 3476408 - MGP_CBAJ_P0035837 Pfkp protein_coding protein_coding MGP_CBAJ_T0035838.1 MGP_CBAJ_G0019925.1 mouse_genomes_project 13 3412943 3418571 - MGP_CBAJ_P0035838 Pfkp protein_coding protein_coding MGP_CBAJ_T0035839.1 MGP_CBAJ_G0019925.1 mouse_genomes_project 13 3413948 3430236 - MGP_CBAJ_P0035839 Pfkp protein_coding nonsense_mediated_decay MGP_CBAJ_T0035840.1 MGP_CBAJ_G0019925.1 mouse_genomes_project 13 3413948 3429355 - MGP_CBAJ_P0035840 Pfkp protein_coding nonsense_mediated_decay MGP_CBAJ_T0035841.1 MGP_CBAJ_G0019925.1 mouse_genomes_project 13 3417363 3420101 - Pfkp protein_coding retained_intron MGP_CBAJ_T0035842.1 MGP_CBAJ_G0019925.1 mouse_genomes_project 13 3424448 3476408 - Pfkp protein_coding retained_intron MGP_CBAJ_T0035843.1 MGP_CBAJ_G0019925.1 mouse_genomes_project 13 3429770 3434287 - Pfkp protein_coding retained_intron MGP_CBAJ_T0035844.1 MGP_CBAJ_G0019925.1 mouse_genomes_project 13 3433876 3476408 - Pfkp protein_coding retained_intron MGP_CBAJ_T0035845.1 MGP_CBAJ_G0019925.1 mouse_genomes_project 13 3442196 3449739 - Pfkp protein_coding retained_intron MGP_CBAJ_T0035846.1 MGP_CBAJ_G0019925.1 mouse_genomes_project 13 3446747 3476408 - Pfkp protein_coding retained_intron MGP_CBAJ_T0035847.1 MGP_CBAJ_G0019925.1 mouse_genomes_project 13 3448576 3464337 - MGP_CBAJ_P0035847 Pfkp protein_coding protein_coding MGP_CBAJ_T0012799.1 MGP_CBAJ_G0010911.1 mouse_genomes_project 13 123500980 123501937 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0036884.1 MGP_CBAJ_G0020334.1 mouse_genomes_project 13 60988529 61515205 - MGP_CBAJ_P0036884 Spock1 protein_coding protein_coding MGP_CBAJ_T0036885.1 MGP_CBAJ_G0020334.1 mouse_genomes_project 13 60988541 61515166 - MGP_CBAJ_P0036885 Spock1 protein_coding protein_coding MGP_CBAJ_T0036886.1 MGP_CBAJ_G0020334.1 mouse_genomes_project 13 60993428 61515166 - MGP_CBAJ_P0036886 Spock1 protein_coding protein_coding MGP_CBAJ_T0036887.1 MGP_CBAJ_G0020334.1 mouse_genomes_project 13 60996035 61515182 - MGP_CBAJ_P0036887 Spock1 protein_coding protein_coding MGP_CBAJ_T0036888.1 MGP_CBAJ_G0020334.1 mouse_genomes_project 13 60996620 61514478 - MGP_CBAJ_P0036888 Spock1 protein_coding protein_coding MGP_CBAJ_T0036889.1 MGP_CBAJ_G0020334.1 mouse_genomes_project 13 61001740 61515190 - Spock1 protein_coding retained_intron MGP_CBAJ_T0036245.1 MGP_CBAJ_G0020112.1 mouse_genomes_project 13 27495786 27502863 + MGP_CBAJ_P0036245 Prl2a1 protein_coding protein_coding MGP_CBAJ_T0036156.1 MGP_CBAJ_G0020080.1 mouse_genomes_project 13 23042673 23082600 - MGP_CBAJ_P0036156 Scgn protein_coding protein_coding MGP_CBAJ_T0036157.1 MGP_CBAJ_G0020080.1 mouse_genomes_project 13 23051356 23056409 - Scgn protein_coding processed_transcript MGP_CBAJ_T0036413.1 MGP_CBAJ_G0020182.1 mouse_genomes_project 13 39485052 39653689 + MGP_CBAJ_P0036413 Bmp6 protein_coding protein_coding MGP_CBAJ_T0036137.1 MGP_CBAJ_G0020067.1 mouse_genomes_project 13 22822376 22822655 - MGP_CBAJ_P0036137 protein_coding protein_coding MGP_CBAJ_T0037578.1 MGP_CBAJ_G0020578.1 mouse_genomes_project 13 108270943 108348657 + MGP_CBAJ_P0037578 Mrps27 protein_coding protein_coding MGP_CBAJ_T0006424.1 MGP_CBAJ_G0005330.1 mouse_genomes_project 13 23478405 23487580 - Gm11345 lincRNA lincRNA MGP_CBAJ_T0006485.1 MGP_CBAJ_G0005370.1 mouse_genomes_project 13 57541876 57542119 - Gm16248 lincRNA lincRNA MGP_CBAJ_T0097945.1 MGP_CBAJ_G0036218.1 mouse_genomes_project 13 127763142 127763233 + Gm23198 rRNA rRNA MGP_CBAJ_T0009835.1 MGP_CBAJ_G0007973.1 mouse_genomes_project 13 102124839 102124964 - Gm25534 miRNA miRNA MGP_CBAJ_T0100041.1 MGP_CBAJ_G0038296.1 mouse_genomes_project 13 6056198 6056333 - Gm25274 snoRNA snoRNA MGP_CBAJ_T0036748.1 MGP_CBAJ_G0020290.1 mouse_genomes_project 13 57992880 58000281 + MGP_CBAJ_P0036748 Tspan17 protein_coding protein_coding MGP_CBAJ_T0036749.1 MGP_CBAJ_G0020290.1 mouse_genomes_project 13 57992906 58000273 + MGP_CBAJ_P0036749 Tspan17 protein_coding protein_coding MGP_CBAJ_T0036750.1 MGP_CBAJ_G0020290.1 mouse_genomes_project 13 57992966 57999691 + MGP_CBAJ_P0036750 Tspan17 protein_coding protein_coding MGP_CBAJ_T0036751.1 MGP_CBAJ_G0020290.1 mouse_genomes_project 13 57993098 57999622 + MGP_CBAJ_P0036751 Tspan17 protein_coding protein_coding MGP_CBAJ_T0036752.1 MGP_CBAJ_G0020290.1 mouse_genomes_project 13 57993098 57999726 + MGP_CBAJ_P0036752 Tspan17 protein_coding protein_coding MGP_CBAJ_T0036753.1 MGP_CBAJ_G0020290.1 mouse_genomes_project 13 57993148 57998652 + MGP_CBAJ_P0036753 Tspan17 protein_coding protein_coding MGP_CBAJ_T0036754.1 MGP_CBAJ_G0020290.1 mouse_genomes_project 13 57996243 57999669 + MGP_CBAJ_P0036754 Tspan17 protein_coding protein_coding MGP_CBAJ_T0036755.1 MGP_CBAJ_G0020290.1 mouse_genomes_project 13 57996374 58000280 + MGP_CBAJ_P0036755 Tspan17 protein_coding protein_coding MGP_CBAJ_T0036756.1 MGP_CBAJ_G0020290.1 mouse_genomes_project 13 57998887 58000273 + Tspan17 protein_coding retained_intron MGP_CBAJ_T0036414.1 MGP_CBAJ_G0020183.1 mouse_genomes_project 13 39654233 39684827 - MGP_CBAJ_P0036414 Txndc5 protein_coding protein_coding MGP_CBAJ_T0036415.1 MGP_CBAJ_G0020183.1 mouse_genomes_project 13 39654237 39659905 - Txndc5 protein_coding retained_intron MGP_CBAJ_T0036416.1 MGP_CBAJ_G0020183.1 mouse_genomes_project 13 39655545 39685321 - MGP_CBAJ_P0036416 Txndc5 protein_coding protein_coding MGP_CBAJ_T0035875.1 MGP_CBAJ_G0019933.1 mouse_genomes_project 13 6216434 6299615 + MGP_CBAJ_P0035875 Larp4b protein_coding protein_coding MGP_CBAJ_T0035876.1 MGP_CBAJ_G0019933.1 mouse_genomes_project 13 6216460 6299807 + MGP_CBAJ_P0035876 Larp4b protein_coding protein_coding MGP_CBAJ_T0035877.1 MGP_CBAJ_G0019933.1 mouse_genomes_project 13 6216465 6249117 + MGP_CBAJ_P0035877 Larp4b protein_coding protein_coding MGP_CBAJ_T0035878.1 MGP_CBAJ_G0019933.1 mouse_genomes_project 13 6216535 6302980 + MGP_CBAJ_P0035878 Larp4b protein_coding protein_coding MGP_CBAJ_T0035879.1 MGP_CBAJ_G0019933.1 mouse_genomes_project 13 6216711 6302939 + MGP_CBAJ_P0035879 Larp4b protein_coding unknown_likely_coding MGP_CBAJ_T0035880.1 MGP_CBAJ_G0019933.1 mouse_genomes_project 13 6264021 6272316 + Larp4b protein_coding processed_transcript MGP_CBAJ_T0035881.1 MGP_CBAJ_G0019933.1 mouse_genomes_project 13 6264241 6265007 + Larp4b protein_coding processed_transcript MGP_CBAJ_T0035882.1 MGP_CBAJ_G0019933.1 mouse_genomes_project 13 6296871 6301650 + Larp4b protein_coding retained_intron MGP_CBAJ_T0012734.1 MGP_CBAJ_G0010846.1 mouse_genomes_project 13 24825396 24826088 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0035869.1 MGP_CBAJ_G0019929.1 mouse_genomes_project 13 5983469 5988245 + MGP_CBAJ_P0035869 Idi1 protein_coding protein_coding MGP_CBAJ_T0035870.1 MGP_CBAJ_G0019929.1 mouse_genomes_project 13 5983602 5988968 + MGP_CBAJ_P0035870 Idi1 protein_coding protein_coding MGP_CBAJ_T0036203.1 MGP_CBAJ_G0020090.1 mouse_genomes_project 13 24128036 24181082 + MGP_CBAJ_P0036203 protein_coding unknown_likely_coding MGP_CBAJ_T0036204.1 MGP_CBAJ_G0020090.1 mouse_genomes_project 13 24146338 24153778 + protein_coding processed_transcript MGP_CBAJ_T0036205.1 MGP_CBAJ_G0020090.1 mouse_genomes_project 13 24170338 24181713 + MGP_CBAJ_P0036205 protein_coding protein_coding MGP_CBAJ_T0037430.1 MGP_CBAJ_G0020523.1 mouse_genomes_project 13 100765215 100815102 - MGP_CBAJ_P0037430 Thbs4 protein_coding protein_coding MGP_CBAJ_T0037431.1 MGP_CBAJ_G0020523.1 mouse_genomes_project 13 100786788 100788604 - Thbs4 protein_coding retained_intron MGP_CBAJ_T0037554.1 MGP_CBAJ_G0020567.1 mouse_genomes_project 13 107096360 107124721 + MGP_CBAJ_P0037554 Gm21976 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037555.1 MGP_CBAJ_G0020567.1 mouse_genomes_project 13 107096365 107109982 + MGP_CBAJ_P0037555 Gm21976 protein_coding protein_coding MGP_CBAJ_T0037556.1 MGP_CBAJ_G0020567.1 mouse_genomes_project 13 107096411 107124721 + MGP_CBAJ_P0037556 Gm21976 protein_coding protein_coding MGP_CBAJ_T0037557.1 MGP_CBAJ_G0020567.1 mouse_genomes_project 13 107120090 107124659 + MGP_CBAJ_P0037557 Gm21976 protein_coding protein_coding MGP_CBAJ_T0036579.1 MGP_CBAJ_G0020243.1 mouse_genomes_project 13 51737226 51784929 - MGP_CBAJ_P0036579 Fgd3 protein_coding protein_coding MGP_CBAJ_T0036580.1 MGP_CBAJ_G0020243.1 mouse_genomes_project 13 51738782 51774679 - MGP_CBAJ_P0036580 Fgd3 protein_coding protein_coding MGP_CBAJ_T0036581.1 MGP_CBAJ_G0020243.1 mouse_genomes_project 13 51749050 51795940 - MGP_CBAJ_P0036581 Fgd3 protein_coding protein_coding MGP_CBAJ_T0036417.1 MGP_CBAJ_G0020184.1 mouse_genomes_project 13 39787008 39825643 - MGP_CBAJ_P0036417 Bloc1s5 protein_coding protein_coding MGP_CBAJ_T0037230.1 MGP_CBAJ_G0020471.1 mouse_genomes_project 13 80218744 80223172 - MGP_CBAJ_P0037230 Lrrc14b protein_coding protein_coding MGP_CBAJ_T0036989.1 MGP_CBAJ_G0020367.1 mouse_genomes_project 13 65188866 65197143 - MGP_CBAJ_P0036989 Cts6 protein_coding protein_coding MGP_CBAJ_T0037875.1 MGP_CBAJ_G0020673.1 mouse_genomes_project 13 130930043 130931173 - MGP_CBAJ_P0037875 protein_coding protein_coding MGP_CBAJ_T0009794.1 MGP_CBAJ_G0007932.1 mouse_genomes_project 13 20042537 20042618 + Mir1896 miRNA miRNA MGP_CBAJ_T0000863.1 MGP_CBAJ_G0000798.1 mouse_genomes_project 13 110708123 110708607 - TEC TEC MGP_CBAJ_T0011230.1 MGP_CBAJ_G0009368.1 mouse_genomes_project 13 60193178 60193305 + Gm27301 misc_RNA misc_RNA MGP_CBAJ_T0012793.1 MGP_CBAJ_G0010905.1 mouse_genomes_project 13 113804588 113804969 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003359.1 MGP_CBAJ_G0003085.1 mouse_genomes_project 13 20593133 20597954 - Gm11280 antisense antisense MGP_CBAJ_T0036994.1 MGP_CBAJ_G0020372.1 mouse_genomes_project 13 67227773 67242078 - MGP_CBAJ_P0036994 Gm5141 protein_coding protein_coding MGP_CBAJ_T0036693.1 MGP_CBAJ_G0020280.1 mouse_genomes_project 13 57748703 57754938 + MGP_CBAJ_P0036693 Arl10 protein_coding protein_coding MGP_CBAJ_T0036694.1 MGP_CBAJ_G0020280.1 mouse_genomes_project 13 57748735 57752707 + MGP_CBAJ_P0036694 Arl10 protein_coding protein_coding MGP_CBAJ_T0036695.1 MGP_CBAJ_G0020280.1 mouse_genomes_project 13 57752071 57752600 + Arl10 protein_coding processed_transcript MGP_CBAJ_T0036696.1 MGP_CBAJ_G0020280.1 mouse_genomes_project 13 57752502 57753228 + MGP_CBAJ_P0036696 Arl10 protein_coding protein_coding MGP_CBAJ_T0037732.1 MGP_CBAJ_G0020621.1 mouse_genomes_project 13 116864138 116865847 + MGP_CBAJ_P0037732 3830408C21Rik protein_coding protein_coding MGP_CBAJ_T0036700.1 MGP_CBAJ_G0020282.1 mouse_genomes_project 13 57764140 57765092 + MGP_CBAJ_P0036700 Higd2a protein_coding protein_coding MGP_CBAJ_T0006491.1 MGP_CBAJ_G0005375.1 mouse_genomes_project 13 59643287 59664956 - 4930550C17Rik lincRNA lincRNA MGP_CBAJ_T0003432.1 MGP_CBAJ_G0003130.1 mouse_genomes_project 13 116592563 116602934 + Gm28989 antisense antisense MGP_CBAJ_T0012745.1 MGP_CBAJ_G0010857.1 mouse_genomes_project 13 30266338 30266767 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012703.1 MGP_CBAJ_G0010815.1 mouse_genomes_project 13 6049350 6049986 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0003433.1 MGP_CBAJ_G0003131.1 mouse_genomes_project 13 116662645 116664542 + Gm28988 antisense antisense MGP_CBAJ_T0003362.1 MGP_CBAJ_G0003087.1 mouse_genomes_project 13 21560327 21561137 + antisense antisense MGP_CBAJ_T0003364.1 MGP_CBAJ_G0003089.1 mouse_genomes_project 13 22877140 22886940 - Gm11337 antisense antisense MGP_CBAJ_T0017100.1 MGP_CBAJ_G0014994.1 mouse_genomes_project 13 35956973 35959456 + 1700011B04Rik processed_transcript retained_intron MGP_CBAJ_T0017101.1 MGP_CBAJ_G0014994.1 mouse_genomes_project 13 35958328 35964700 + 1700011B04Rik processed_transcript lincRNA MGP_CBAJ_T0037753.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 118487776 118923924 + Pde4d protein_coding processed_transcript MGP_CBAJ_T0037754.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 118487837 118922939 + Pde4d protein_coding processed_transcript MGP_CBAJ_T0037755.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 118699830 120155296 + MGP_CBAJ_P0037755 Pde4d protein_coding protein_coding MGP_CBAJ_T0037756.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 118922961 120155166 + MGP_CBAJ_P0037756 Pde4d protein_coding protein_coding MGP_CBAJ_T0037757.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 119223777 119469506 + Pde4d protein_coding processed_transcript MGP_CBAJ_T0037758.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 119223905 119947947 + Pde4d protein_coding retained_intron MGP_CBAJ_T0037759.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 119224187 120155209 + MGP_CBAJ_P0037759 Pde4d protein_coding protein_coding MGP_CBAJ_T0037760.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 119392843 120155186 + MGP_CBAJ_P0037760 Pde4d protein_coding protein_coding MGP_CBAJ_T0037761.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 119585699 120155186 + MGP_CBAJ_P0037761 Pde4d protein_coding protein_coding MGP_CBAJ_T0037762.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 119737558 120155166 + MGP_CBAJ_P0037762 Pde4d protein_coding protein_coding MGP_CBAJ_T0037763.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 119795042 120155186 + MGP_CBAJ_P0037763 Pde4d protein_coding protein_coding MGP_CBAJ_T0037764.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 119859269 120155296 + MGP_CBAJ_P0037764 Pde4d protein_coding protein_coding MGP_CBAJ_T0037765.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 119859289 119947944 + Pde4d protein_coding retained_intron MGP_CBAJ_T0037766.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 119938385 119942777 + Pde4d protein_coding processed_transcript MGP_CBAJ_T0037767.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 120098848 120155209 + MGP_CBAJ_P0037767 Pde4d protein_coding nonsense_mediated_decay MGP_CBAJ_T0037768.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 120098852 120157278 + MGP_CBAJ_P0037768 Pde4d protein_coding protein_coding MGP_CBAJ_T0037769.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 120118742 120139276 + Pde4d protein_coding retained_intron MGP_CBAJ_T0037770.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 120120904 120155166 + MGP_CBAJ_P0037770 Pde4d protein_coding protein_coding MGP_CBAJ_T0037771.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 120122688 120155186 + MGP_CBAJ_P0037771 Pde4d protein_coding protein_coding MGP_CBAJ_T0037772.1 MGP_CBAJ_G0020628.1 mouse_genomes_project 13 120136393 120152169 + MGP_CBAJ_P0037772 Pde4d protein_coding protein_coding MGP_CBAJ_T0098790.1 MGP_CBAJ_G0037045.1 mouse_genomes_project 13 12601620 12601733 - Gm25444 snRNA snRNA MGP_CBAJ_T0036308.1 MGP_CBAJ_G0020142.1 mouse_genomes_project 13 33525034 33540217 + MGP_CBAJ_P0036308 Serpinb1b protein_coding protein_coding MGP_CBAJ_T0012708.1 MGP_CBAJ_G0010820.1 mouse_genomes_project 13 17811676 17812125 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0037130.1 MGP_CBAJ_G0020428.1 mouse_genomes_project 13 72992765 73018980 + MGP_CBAJ_P0037130 protein_coding protein_coding MGP_CBAJ_T0037450.1 MGP_CBAJ_G0020530.1 mouse_genomes_project 13 101800488 101820749 - MGP_CBAJ_P0037450 Bhmt2 protein_coding protein_coding MGP_CBAJ_T0009826.1 MGP_CBAJ_G0007964.1 mouse_genomes_project 13 67842762 67842847 - Mir3074-1 miRNA miRNA MGP_CBAJ_T0036985.1 MGP_CBAJ_G0020364.1 mouse_genomes_project 13 64937803 64943439 - MGP_CBAJ_P0036985 Ctsj protein_coding protein_coding MGP_CBAJ_T0036311.1 MGP_CBAJ_G0020144.1 mouse_genomes_project 13 33655295 33669741 + MGP_CBAJ_P0036311 Serpinb9d protein_coding protein_coding MGP_CBAJ_T0036211.1 MGP_CBAJ_G0020093.1 mouse_genomes_project 13 24463961 24482004 - MGP_CBAJ_P0036211 Nrsn1 protein_coding protein_coding MGP_CBAJ_T0036212.1 MGP_CBAJ_G0020093.1 mouse_genomes_project 13 24464113 24474607 - MGP_CBAJ_P0036212 Nrsn1 protein_coding protein_coding MGP_CBAJ_T0036213.1 MGP_CBAJ_G0020093.1 mouse_genomes_project 13 24465329 24474604 - Nrsn1 protein_coding processed_transcript MGP_CBAJ_T0036214.1 MGP_CBAJ_G0020093.1 mouse_genomes_project 13 24481956 24482424 - Nrsn1 protein_coding processed_transcript MGP_CBAJ_T0036790.1 MGP_CBAJ_G0020297.1 mouse_genomes_project 13 58475049 58600436 + MGP_CBAJ_P0036790 Nsd1 protein_coding unknown_likely_coding MGP_CBAJ_T0037615.1 MGP_CBAJ_G0020588.1 mouse_genomes_project 13 109623218 109686596 - MGP_CBAJ_P0037615 Ocln protein_coding protein_coding MGP_CBAJ_T0037616.1 MGP_CBAJ_G0020588.1 mouse_genomes_project 13 109644202 109686474 - MGP_CBAJ_P0037616 Ocln protein_coding protein_coding MGP_CBAJ_T0037163.1 MGP_CBAJ_G0020446.1 mouse_genomes_project 13 78329420 78334777 + MGP_CBAJ_P0037163 Irx2 protein_coding protein_coding MGP_CBAJ_T0037164.1 MGP_CBAJ_G0020446.1 mouse_genomes_project 13 78329571 78331304 + Irx2 protein_coding processed_transcript MGP_CBAJ_T0037165.1 MGP_CBAJ_G0020446.1 mouse_genomes_project 13 78330403 78331459 + MGP_CBAJ_P0037165 Irx2 protein_coding protein_coding MGP_CBAJ_T0037166.1 MGP_CBAJ_G0020446.1 mouse_genomes_project 13 78332663 78334192 + Irx2 protein_coding retained_intron MGP_CBAJ_T0037167.1 MGP_CBAJ_G0020446.1 mouse_genomes_project 13 78333175 78334349 + MGP_CBAJ_P0037167 Irx2 protein_coding protein_coding MGP_CBAJ_T0003356.1 MGP_CBAJ_G0003082.1 mouse_genomes_project 13 13503306 13504622 - Gm26645 antisense antisense MGP_CBAJ_T0006436.1 MGP_CBAJ_G0005338.1 mouse_genomes_project 13 30728745 30737864 + 4930519D14Rik lincRNA lincRNA MGP_CBAJ_T0009837.1 MGP_CBAJ_G0007975.1 mouse_genomes_project 13 104821564 104821677 + Gm25213 miRNA miRNA MGP_CBAJ_T0003404.1 MGP_CBAJ_G0003116.1 mouse_genomes_project 13 79833832 79835035 - Gm15912 antisense antisense MGP_CBAJ_T0036231.1 MGP_CBAJ_G0020104.1 mouse_genomes_project 13 27003445 27009657 - MGP_CBAJ_P0036231 Prl8a6 protein_coding protein_coding MGP_CBAJ_T0036232.1 MGP_CBAJ_G0020104.1 mouse_genomes_project 13 27003445 27009617 - MGP_CBAJ_P0036232 Prl8a6 protein_coding protein_coding MGP_CBAJ_T0036233.1 MGP_CBAJ_G0020104.1 mouse_genomes_project 13 27003632 27009566 - MGP_CBAJ_P0036233 Prl8a6 protein_coding protein_coding MGP_CBAJ_T0100069.1 MGP_CBAJ_G0038324.1 mouse_genomes_project 13 82031188 82031318 + Gm24163 snoRNA snoRNA MGP_CBAJ_T0036508.1 MGP_CBAJ_G0020220.1 mouse_genomes_project 13 48250054 48267802 - MGP_CBAJ_P0036508 Gm10113 protein_coding protein_coding MGP_CBAJ_T0036897.1 MGP_CBAJ_G0020339.1 mouse_genomes_project 13 61889050 61935810 - MGP_CBAJ_P0036897 Gkap1 protein_coding protein_coding MGP_CBAJ_T0011235.1 MGP_CBAJ_G0009373.1 mouse_genomes_project 13 111620572 111620856 + Gm25808 misc_RNA misc_RNA MGP_CBAJ_T0037773.1 MGP_CBAJ_G0020629.1 mouse_genomes_project 13 120260998 120507407 - MGP_CBAJ_P0037773 Rab3c protein_coding protein_coding MGP_CBAJ_T0037382.1 MGP_CBAJ_G0020509.1 mouse_genomes_project 13 98788978 99101763 - MGP_CBAJ_P0037382 Atg10 protein_coding protein_coding MGP_CBAJ_T0012720.1 MGP_CBAJ_G0010832.1 mouse_genomes_project 13 21196976 21202736 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0037171.1 MGP_CBAJ_G0020449.1 mouse_genomes_project 13 79072642 79081296 - MGP_CBAJ_P0037171 Ndufs6 protein_coding protein_coding MGP_CBAJ_T0037172.1 MGP_CBAJ_G0020449.1 mouse_genomes_project 13 79072647 79081206 - MGP_CBAJ_P0037172 Ndufs6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036523.1 MGP_CBAJ_G0020228.1 mouse_genomes_project 13 49176832 49194547 - MGP_CBAJ_P0036523 Tpmt protein_coding protein_coding MGP_CBAJ_T0036524.1 MGP_CBAJ_G0020228.1 mouse_genomes_project 13 49176841 49194461 - MGP_CBAJ_P0036524 Tpmt protein_coding protein_coding MGP_CBAJ_T0036525.1 MGP_CBAJ_G0020228.1 mouse_genomes_project 13 49177030 49196001 - MGP_CBAJ_P0036525 Tpmt protein_coding nonsense_mediated_decay MGP_CBAJ_T0036526.1 MGP_CBAJ_G0020228.1 mouse_genomes_project 13 49180317 49194680 - MGP_CBAJ_P0036526 Tpmt protein_coding protein_coding MGP_CBAJ_T0036527.1 MGP_CBAJ_G0020228.1 mouse_genomes_project 13 49180336 49196074 - MGP_CBAJ_P0036527 Tpmt protein_coding protein_coding MGP_CBAJ_T0036528.1 MGP_CBAJ_G0020228.1 mouse_genomes_project 13 49191033 49194481 - Tpmt protein_coding retained_intron MGP_CBAJ_T0036529.1 MGP_CBAJ_G0020228.1 mouse_genomes_project 13 49191443 49194475 - MGP_CBAJ_P0036529 Tpmt protein_coding protein_coding MGP_CBAJ_T0037804.1 MGP_CBAJ_G0020638.1 mouse_genomes_project 13 123086617 123151882 - MGP_CBAJ_P0037804 Il31ra protein_coding protein_coding MGP_CBAJ_T0037546.1 MGP_CBAJ_G0020563.1 mouse_genomes_project 13 105904024 105918270 + MGP_CBAJ_P0037546 Enc1 protein_coding protein_coding MGP_CBAJ_T0006435.1 MGP_CBAJ_G0005337.1 mouse_genomes_project 13 30109008 30120432 + lincRNA lincRNA MGP_CBAJ_T0037628.1 MGP_CBAJ_G0020595.1 mouse_genomes_project 13 109904046 109915857 - MGP_CBAJ_P0037628 Mrps36 protein_coding unknown_likely_coding MGP_CBAJ_T0037629.1 MGP_CBAJ_G0020595.1 mouse_genomes_project 13 109904284 109915877 - Mrps36 protein_coding processed_transcript MGP_CBAJ_T0037630.1 MGP_CBAJ_G0020595.1 mouse_genomes_project 13 109904284 109915403 - Mrps36 protein_coding processed_transcript MGP_CBAJ_T0037631.1 MGP_CBAJ_G0020595.1 mouse_genomes_project 13 109904284 109915420 - Mrps36 protein_coding processed_transcript MGP_CBAJ_T0037632.1 MGP_CBAJ_G0020595.1 mouse_genomes_project 13 109904284 109915946 - MGP_CBAJ_P0037632 Mrps36 protein_coding protein_coding MGP_CBAJ_T0037633.1 MGP_CBAJ_G0020595.1 mouse_genomes_project 13 109914671 109915402 - Mrps36 protein_coding processed_transcript MGP_CBAJ_T0003405.1 MGP_CBAJ_G0003117.1 mouse_genomes_project 13 84474006 84534123 + antisense antisense MGP_CBAJ_T0003406.1 MGP_CBAJ_G0003117.1 mouse_genomes_project 13 84490299 84533105 + antisense antisense MGP_CBAJ_T0003407.1 MGP_CBAJ_G0003117.1 mouse_genomes_project 13 84490689 84534815 + antisense antisense MGP_CBAJ_T0003408.1 MGP_CBAJ_G0003117.1 mouse_genomes_project 13 84490868 84523334 + antisense antisense MGP_CBAJ_T0003409.1 MGP_CBAJ_G0003117.1 mouse_genomes_project 13 84491102 84592393 + antisense antisense MGP_CBAJ_T0037266.1 MGP_CBAJ_G0020487.1 mouse_genomes_project 13 83935633 84442370 + MGP_CBAJ_P0037266 Fam172a protein_coding protein_coding MGP_CBAJ_T0037267.1 MGP_CBAJ_G0020487.1 mouse_genomes_project 13 83935638 84442363 + MGP_CBAJ_P0037267 Fam172a protein_coding protein_coding MGP_CBAJ_T0036085.1 MGP_CBAJ_G0020025.1 mouse_genomes_project 13 21170625 21171424 + MGP_CBAJ_P0036085 Vmn1r189 protein_coding protein_coding MGP_CBAJ_T0017106.1 MGP_CBAJ_G0014998.1 mouse_genomes_project 13 87491927 87493229 - 1700023H06Rik processed_transcript processed_transcript MGP_CBAJ_T0100044.1 MGP_CBAJ_G0038299.1 mouse_genomes_project 13 8765985 8766105 - Gm25496 snoRNA snoRNA MGP_CBAJ_T0036107.1 MGP_CBAJ_G0020044.1 mouse_genomes_project 13 22420293 22422617 - MGP_CBAJ_P0036107 Abt1 protein_coding protein_coding MGP_CBAJ_T0012763.1 MGP_CBAJ_G0010875.1 mouse_genomes_project 13 68559892 68560536 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0037249.1 MGP_CBAJ_G0020484.1 mouse_genomes_project 13 82541961 83225164 + MGP_CBAJ_P0037249 Mctp1 protein_coding protein_coding MGP_CBAJ_T0037250.1 MGP_CBAJ_G0020484.1 mouse_genomes_project 13 82753156 82944269 + MGP_CBAJ_P0037250 Mctp1 protein_coding protein_coding MGP_CBAJ_T0037251.1 MGP_CBAJ_G0020484.1 mouse_genomes_project 13 82753156 83223315 + MGP_CBAJ_P0037251 Mctp1 protein_coding protein_coding MGP_CBAJ_T0037252.1 MGP_CBAJ_G0020484.1 mouse_genomes_project 13 82753210 82910373 + MGP_CBAJ_P0037252 Mctp1 protein_coding protein_coding MGP_CBAJ_T0037253.1 MGP_CBAJ_G0020484.1 mouse_genomes_project 13 82901225 83010574 + Mctp1 protein_coding retained_intron MGP_CBAJ_T0037254.1 MGP_CBAJ_G0020484.1 mouse_genomes_project 13 83006946 83009815 + Mctp1 protein_coding retained_intron MGP_CBAJ_T0037255.1 MGP_CBAJ_G0020484.1 mouse_genomes_project 13 83007185 83224102 + Mctp1 protein_coding retained_intron MGP_CBAJ_T0037256.1 MGP_CBAJ_G0020484.1 mouse_genomes_project 13 83007222 83010017 + Mctp1 protein_coding retained_intron MGP_CBAJ_T0012713.1 MGP_CBAJ_G0010825.1 mouse_genomes_project 13 20522836 20523833 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012769.1 MGP_CBAJ_G0010881.1 mouse_genomes_project 13 74181720 74182474 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0037211.1 MGP_CBAJ_G0020466.1 mouse_genomes_project 13 80011950 80054686 - MGP_CBAJ_P0037211 Exoc3 protein_coding protein_coding MGP_CBAJ_T0036475.1 MGP_CBAJ_G0020208.1 mouse_genomes_project 13 45094905 45117517 + MGP_CBAJ_P0036475 Sirt5 protein_coding protein_coding MGP_CBAJ_T0036505.1 MGP_CBAJ_G0020219.1 mouse_genomes_project 13 47508082 47986484 - MGP_CBAJ_P0036505 Atxn1 protein_coding protein_coding MGP_CBAJ_T0036506.1 MGP_CBAJ_G0020219.1 mouse_genomes_project 13 47508082 47986484 - MGP_CBAJ_P0036506 Atxn1 protein_coding protein_coding MGP_CBAJ_T0036507.1 MGP_CBAJ_G0020219.1 mouse_genomes_project 13 47508082 47986484 - MGP_CBAJ_P0036507 Atxn1 protein_coding protein_coding MGP_CBAJ_T0012781.1 MGP_CBAJ_G0010893.1 mouse_genomes_project 13 86642469 86643633 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097937.1 MGP_CBAJ_G0036210.1 mouse_genomes_project 13 217991 218105 + Gm23084 rRNA rRNA MGP_CBAJ_T0101618.1 MGP_CBAJ_G0039649.1 mouse_genomes_project 13 33552856 33558451 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0009791.1 MGP_CBAJ_G0007929.1 mouse_genomes_project 13 6016091 6016194 - Gm22750 miRNA miRNA MGP_CBAJ_T0037087.1 MGP_CBAJ_G0020404.1 mouse_genomes_project 13 72015486 72032894 - MGP_CBAJ_P0037087 Rslcan18 protein_coding protein_coding MGP_CBAJ_T0037089.1 MGP_CBAJ_G0020404.1 mouse_genomes_project 13 72029882 72035164 - Rslcan18 protein_coding retained_intron MGP_CBAJ_T0036969.1 MGP_CBAJ_G0020352.1 mouse_genomes_project 13 63582913 63601079 - MGP_CBAJ_P0036969 protein_coding protein_coding MGP_CBAJ_T0036970.1 MGP_CBAJ_G0020352.1 mouse_genomes_project 13 63589430 63601045 - protein_coding retained_intron MGP_CBAJ_T0036215.1 MGP_CBAJ_G0020094.1 mouse_genomes_project 13 26174075 26176014 - MGP_CBAJ_P0036215 Hdgfl1 protein_coding protein_coding MGP_CBAJ_T0036098.1 MGP_CBAJ_G0020038.1 mouse_genomes_project 13 21961581 21962478 - MGP_CBAJ_P0036098 Vmn1r217 protein_coding protein_coding MGP_CBAJ_T0037114.1 MGP_CBAJ_G0020421.1 mouse_genomes_project 13 72577278 72595442 - MGP_CBAJ_P0037114 protein_coding protein_coding MGP_CBAJ_T0037115.1 MGP_CBAJ_G0020421.1 mouse_genomes_project 13 72587058 72595442 - MGP_CBAJ_P0037115 protein_coding protein_coding MGP_CBAJ_T0101611.1 MGP_CBAJ_G0039642.1 mouse_genomes_project 13 22072351 22073256 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0036832.1 MGP_CBAJ_G0020314.1 mouse_genomes_project 13 58933432 58944687 + MGP_CBAJ_P0036832 B4galt7 protein_coding protein_coding MGP_CBAJ_T0036833.1 MGP_CBAJ_G0020314.1 mouse_genomes_project 13 58933601 58941848 + B4galt7 protein_coding retained_intron MGP_CBAJ_T0036834.1 MGP_CBAJ_G0020314.1 mouse_genomes_project 13 58933601 58942632 + MGP_CBAJ_P0036834 B4galt7 protein_coding protein_coding MGP_CBAJ_T0036835.1 MGP_CBAJ_G0020314.1 mouse_genomes_project 13 58933601 58944686 + MGP_CBAJ_P0036835 B4galt7 protein_coding protein_coding MGP_CBAJ_T0017105.1 MGP_CBAJ_G0014997.1 mouse_genomes_project 13 75061771 75066175 - Gm17108 processed_transcript processed_transcript MGP_CBAJ_T0036965.1 MGP_CBAJ_G0020350.1 mouse_genomes_project 13 63547199 63553027 - MGP_CBAJ_P0036965 Spata31d1d protein_coding protein_coding MGP_CBAJ_T0009804.1 MGP_CBAJ_G0007942.1 mouse_genomes_project 13 28596788 28596881 - Mir6368 miRNA miRNA MGP_CBAJ_T0100045.1 MGP_CBAJ_G0038300.1 mouse_genomes_project 13 10053313 10053540 + Gm25483 snoRNA snoRNA MGP_CBAJ_T0003402.1 MGP_CBAJ_G0003115.1 mouse_genomes_project 13 79492355 79502438 + Slc6a19os antisense antisense MGP_CBAJ_T0003403.1 MGP_CBAJ_G0003115.1 mouse_genomes_project 13 79496245 79501499 + Slc6a19os antisense antisense MGP_CBAJ_T0036977.1 MGP_CBAJ_G0020357.1 mouse_genomes_project 13 64708753 64713225 - MGP_CBAJ_P0036977 BC051665 protein_coding protein_coding MGP_CBAJ_T0009822.1 MGP_CBAJ_G0007960.1 mouse_genomes_project 13 64435355 64435521 - Gm25000 miRNA miRNA MGP_CBAJ_T0036573.1 MGP_CBAJ_G0020242.1 mouse_genomes_project 13 51697245 51717516 - MGP_CBAJ_P0036573 Susd3 protein_coding protein_coding MGP_CBAJ_T0036574.1 MGP_CBAJ_G0020242.1 mouse_genomes_project 13 51697384 51717928 - MGP_CBAJ_P0036574 Susd3 protein_coding protein_coding MGP_CBAJ_T0036575.1 MGP_CBAJ_G0020242.1 mouse_genomes_project 13 51697858 51717885 - MGP_CBAJ_P0036575 Susd3 protein_coding protein_coding MGP_CBAJ_T0036576.1 MGP_CBAJ_G0020242.1 mouse_genomes_project 13 51706917 51709851 - Susd3 protein_coding processed_transcript MGP_CBAJ_T0036577.1 MGP_CBAJ_G0020242.1 mouse_genomes_project 13 51707219 51717376 - MGP_CBAJ_P0036577 Susd3 protein_coding protein_coding MGP_CBAJ_T0036578.1 MGP_CBAJ_G0020242.1 mouse_genomes_project 13 51708136 51712133 - Susd3 protein_coding processed_transcript MGP_CBAJ_T0011233.1 MGP_CBAJ_G0009371.1 mouse_genomes_project 13 99686862 99687170 - Gm24597 misc_RNA misc_RNA MGP_CBAJ_T0036282.1 MGP_CBAJ_G0020128.1 mouse_genomes_project 13 31130741 31132514 + MGP_CBAJ_P0036282 Gm5447 protein_coding protein_coding MGP_CBAJ_T0036603.1 MGP_CBAJ_G0020254.1 mouse_genomes_project 13 53127549 53143455 + MGP_CBAJ_P0036603 Fbxw17 protein_coding protein_coding MGP_CBAJ_T0036604.1 MGP_CBAJ_G0020254.1 mouse_genomes_project 13 53127566 53135342 + MGP_CBAJ_P0036604 Fbxw17 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036605.1 MGP_CBAJ_G0020254.1 mouse_genomes_project 13 53127571 53139943 + Fbxw17 protein_coding processed_transcript MGP_CBAJ_T0036606.1 MGP_CBAJ_G0020254.1 mouse_genomes_project 13 53127571 53143466 + MGP_CBAJ_P0036606 Fbxw17 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036607.1 MGP_CBAJ_G0020254.1 mouse_genomes_project 13 53127580 53129965 + Fbxw17 protein_coding retained_intron MGP_CBAJ_T0036608.1 MGP_CBAJ_G0020254.1 mouse_genomes_project 13 53133540 53136976 + Fbxw17 protein_coding processed_transcript MGP_CBAJ_T0036609.1 MGP_CBAJ_G0020254.1 mouse_genomes_project 13 53139655 53141796 + Fbxw17 protein_coding retained_intron MGP_CBAJ_T0036610.1 MGP_CBAJ_G0020254.1 mouse_genomes_project 13 53140806 53143462 + Fbxw17 protein_coding retained_intron MGP_CBAJ_T0036611.1 MGP_CBAJ_G0020254.1 mouse_genomes_project 13 53140856 53142062 + Fbxw17 protein_coding retained_intron MGP_CBAJ_T0036612.1 MGP_CBAJ_G0020254.1 mouse_genomes_project 13 53141042 53141925 + Fbxw17 protein_coding retained_intron MGP_CBAJ_T0036613.1 MGP_CBAJ_G0020254.1 mouse_genomes_project 13 53141361 53142039 + Fbxw17 protein_coding retained_intron MGP_CBAJ_T0036614.1 MGP_CBAJ_G0020254.1 mouse_genomes_project 13 53141396 53143455 + MGP_CBAJ_P0036614 Fbxw17 protein_coding protein_coding MGP_CBAJ_T0036615.1 MGP_CBAJ_G0020254.1 mouse_genomes_project 13 53141870 53143449 + MGP_CBAJ_P0036615 Fbxw17 protein_coding protein_coding MGP_CBAJ_T0035798.1 MGP_CBAJ_G0019905.1 mouse_genomes_project 13 203513 221292 + MGP_CBAJ_P0035798 Asb13 protein_coding protein_coding MGP_CBAJ_T0035799.1 MGP_CBAJ_G0019905.1 mouse_genomes_project 13 203570 204264 + Asb13 protein_coding processed_transcript MGP_CBAJ_T0035800.1 MGP_CBAJ_G0019905.1 mouse_genomes_project 13 203579 220004 + Asb13 protein_coding processed_transcript MGP_CBAJ_T0035801.1 MGP_CBAJ_G0019905.1 mouse_genomes_project 13 203580 212232 + Asb13 protein_coding retained_intron MGP_CBAJ_T0037881.1 MGP_CBAJ_G0020677.1 mouse_genomes_project 13 131059452 131076929 + MGP_CBAJ_P0037881 Hmgcs1 protein_coding protein_coding MGP_CBAJ_T0036302.1 MGP_CBAJ_G0020139.1 mouse_genomes_project 13 33400078 33413937 + MGP_CBAJ_P0036302 Serpinb6b protein_coding protein_coding MGP_CBAJ_T0036303.1 MGP_CBAJ_G0020139.1 mouse_genomes_project 13 33400313 33413932 + MGP_CBAJ_P0036303 Serpinb6b protein_coding nonsense_mediated_decay MGP_CBAJ_T0036304.1 MGP_CBAJ_G0020139.1 mouse_genomes_project 13 33400372 33413932 + Serpinb6b protein_coding processed_transcript MGP_CBAJ_T0037499.1 MGP_CBAJ_G0020549.1 mouse_genomes_project 13 104386762 104580101 - MGP_CBAJ_P0037499 Sv2c protein_coding protein_coding MGP_CBAJ_T0037500.1 MGP_CBAJ_G0020549.1 mouse_genomes_project 13 104393621 104424142 - Sv2c protein_coding processed_transcript MGP_CBAJ_T0037501.1 MGP_CBAJ_G0020549.1 mouse_genomes_project 13 104415198 104534135 - MGP_CBAJ_P0037501 Sv2c protein_coding protein_coding MGP_CBAJ_T0037513.1 MGP_CBAJ_G0020554.1 mouse_genomes_project 13 105002748 105003136 + MGP_CBAJ_P0037513 Gm17622 protein_coding protein_coding MGP_CBAJ_T0012775.1 MGP_CBAJ_G0010887.1 mouse_genomes_project 13 80197831 80198170 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0037102.1 MGP_CBAJ_G0020415.1 mouse_genomes_project 13 72413237 72442508 - MGP_CBAJ_P0037102 Zfp459 protein_coding protein_coding MGP_CBAJ_T0036734.1 MGP_CBAJ_G0020288.1 mouse_genomes_project 13 57961440 57969254 - MGP_CBAJ_P0036734 Sncb protein_coding protein_coding MGP_CBAJ_T0036735.1 MGP_CBAJ_G0020288.1 mouse_genomes_project 13 57962011 57968756 - MGP_CBAJ_P0036735 Sncb protein_coding protein_coding MGP_CBAJ_T0036736.1 MGP_CBAJ_G0020288.1 mouse_genomes_project 13 57962058 57965696 - Sncb protein_coding retained_intron MGP_CBAJ_T0036737.1 MGP_CBAJ_G0020288.1 mouse_genomes_project 13 57967687 57969151 - Sncb protein_coding retained_intron MGP_CBAJ_T0037210.1 MGP_CBAJ_G0020465.1 mouse_genomes_project 13 79963663 80008210 + MGP_CBAJ_P0037210 Slc9a3 protein_coding protein_coding MGP_CBAJ_T0035993.1 MGP_CBAJ_G0019973.1 mouse_genomes_project 13 18197838 18287422 - MGP_CBAJ_P0035993 Gpr141 protein_coding protein_coding MGP_CBAJ_T0036296.1 MGP_CBAJ_G0020135.1 mouse_genomes_project 13 33214294 33234569 + MGP_CBAJ_P0036296 Wrnip1 protein_coding protein_coding MGP_CBAJ_T0037496.1 MGP_CBAJ_G0020546.1 mouse_genomes_project 13 104000279 104020028 - MGP_CBAJ_P0037496 F2r protein_coding protein_coding MGP_CBAJ_T0101617.1 MGP_CBAJ_G0039648.1 mouse_genomes_project 13 33441408 33441566 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0037110.1 MGP_CBAJ_G0020420.1 mouse_genomes_project 13 72551440 72561838 - MGP_CBAJ_P0037110 Zfp87 protein_coding protein_coding MGP_CBAJ_T0037111.1 MGP_CBAJ_G0020420.1 mouse_genomes_project 13 72553236 72561782 - MGP_CBAJ_P0037111 Zfp87 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037112.1 MGP_CBAJ_G0020420.1 mouse_genomes_project 13 72553641 72561807 - MGP_CBAJ_P0037112 Zfp87 protein_coding protein_coding MGP_CBAJ_T0037113.1 MGP_CBAJ_G0020420.1 mouse_genomes_project 13 72556702 72561838 - MGP_CBAJ_P0037113 Zfp87 protein_coding protein_coding MGP_CBAJ_T0036800.1 MGP_CBAJ_G0020303.1 mouse_genomes_project 13 58701328 58715255 + MGP_CBAJ_P0036800 Slc34a1 protein_coding protein_coding MGP_CBAJ_T0101601.1 MGP_CBAJ_G0039632.1 mouse_genomes_project 13 21707977 21708269 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0000852.1 MGP_CBAJ_G0000787.1 mouse_genomes_project 13 85735783 85736245 - TEC TEC MGP_CBAJ_T0037858.1 MGP_CBAJ_G0020669.1 mouse_genomes_project 13 130035258 130161850 + Fgf10 protein_coding processed_transcript MGP_CBAJ_T0037859.1 MGP_CBAJ_G0020669.1 mouse_genomes_project 13 130035291 130151747 + Fgf10 protein_coding processed_transcript MGP_CBAJ_T0037860.1 MGP_CBAJ_G0020669.1 mouse_genomes_project 13 130079319 130164599 + MGP_CBAJ_P0037860 Fgf10 protein_coding protein_coding MGP_CBAJ_T0006492.1 MGP_CBAJ_G0005376.1 mouse_genomes_project 13 61801651 61802567 + 1700066J03Rik lincRNA lincRNA MGP_CBAJ_T0036588.1 MGP_CBAJ_G0020248.1 mouse_genomes_project 13 52053898 52082124 + MGP_CBAJ_P0036588 Aspn protein_coding protein_coding MGP_CBAJ_T0036589.1 MGP_CBAJ_G0020248.1 mouse_genomes_project 13 52053898 52082124 + MGP_CBAJ_P0036589 Aspn protein_coding protein_coding MGP_CBAJ_T0101607.1 MGP_CBAJ_G0039638.1 mouse_genomes_project 13 21870625 21870915 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0009836.1 MGP_CBAJ_G0007974.1 mouse_genomes_project 13 102781701 102781815 + Gm25109 miRNA miRNA MGP_CBAJ_T0036713.1 MGP_CBAJ_G0020285.1 mouse_genomes_project 13 57864576 57872987 - MGP_CBAJ_P0036713 Rnf44 protein_coding protein_coding MGP_CBAJ_T0036714.1 MGP_CBAJ_G0020285.1 mouse_genomes_project 13 57864578 57873273 - MGP_CBAJ_P0036714 Rnf44 protein_coding protein_coding MGP_CBAJ_T0036715.1 MGP_CBAJ_G0020285.1 mouse_genomes_project 13 57864587 57879023 - MGP_CBAJ_P0036715 Rnf44 protein_coding protein_coding MGP_CBAJ_T0036716.1 MGP_CBAJ_G0020285.1 mouse_genomes_project 13 57864587 57879083 - MGP_CBAJ_P0036716 Rnf44 protein_coding protein_coding MGP_CBAJ_T0036717.1 MGP_CBAJ_G0020285.1 mouse_genomes_project 13 57864591 57873367 - MGP_CBAJ_P0036717 Rnf44 protein_coding protein_coding MGP_CBAJ_T0036718.1 MGP_CBAJ_G0020285.1 mouse_genomes_project 13 57866742 57873438 - MGP_CBAJ_P0036718 Rnf44 protein_coding protein_coding MGP_CBAJ_T0036719.1 MGP_CBAJ_G0020285.1 mouse_genomes_project 13 57867824 57869250 - Rnf44 protein_coding retained_intron MGP_CBAJ_T0036720.1 MGP_CBAJ_G0020285.1 mouse_genomes_project 13 57868229 57879022 - MGP_CBAJ_P0036720 Rnf44 protein_coding protein_coding MGP_CBAJ_T0036721.1 MGP_CBAJ_G0020285.1 mouse_genomes_project 13 57868305 57872833 - MGP_CBAJ_P0036721 Rnf44 protein_coding protein_coding MGP_CBAJ_T0036722.1 MGP_CBAJ_G0020285.1 mouse_genomes_project 13 57868662 57869585 - Rnf44 protein_coding retained_intron MGP_CBAJ_T0036723.1 MGP_CBAJ_G0020285.1 mouse_genomes_project 13 57868787 57873379 - MGP_CBAJ_P0036723 Rnf44 protein_coding protein_coding MGP_CBAJ_T0036724.1 MGP_CBAJ_G0020285.1 mouse_genomes_project 13 57868883 57873436 - MGP_CBAJ_P0036724 Rnf44 protein_coding protein_coding MGP_CBAJ_T0036725.1 MGP_CBAJ_G0020285.1 mouse_genomes_project 13 57868937 57873453 - MGP_CBAJ_P0036725 Rnf44 protein_coding protein_coding MGP_CBAJ_T0036726.1 MGP_CBAJ_G0020285.1 mouse_genomes_project 13 57869141 57878988 - MGP_CBAJ_P0036726 Rnf44 protein_coding protein_coding MGP_CBAJ_T0036727.1 MGP_CBAJ_G0020285.1 mouse_genomes_project 13 57869169 57872987 - MGP_CBAJ_P0036727 Rnf44 protein_coding protein_coding MGP_CBAJ_T0036728.1 MGP_CBAJ_G0020285.1 mouse_genomes_project 13 57869207 57872431 - Rnf44 protein_coding processed_transcript MGP_CBAJ_T0036729.1 MGP_CBAJ_G0020285.1 mouse_genomes_project 13 57869218 57879026 - Rnf44 protein_coding processed_transcript MGP_CBAJ_T0036730.1 MGP_CBAJ_G0020285.1 mouse_genomes_project 13 57869227 57873452 - MGP_CBAJ_P0036730 Rnf44 protein_coding protein_coding MGP_CBAJ_T0006461.1 MGP_CBAJ_G0005357.1 mouse_genomes_project 13 43646806 43647731 + Gm28707 lincRNA lincRNA MGP_CBAJ_T0036996.1 MGP_CBAJ_G0020374.1 mouse_genomes_project 13 67349048 67372584 - MGP_CBAJ_P0036996 Fbp1 protein_coding protein_coding MGP_CBAJ_T0036997.1 MGP_CBAJ_G0020374.1 mouse_genomes_project 13 67349061 67357044 - MGP_CBAJ_P0036997 Fbp1 protein_coding protein_coding MGP_CBAJ_T0036998.1 MGP_CBAJ_G0020374.1 mouse_genomes_project 13 67357004 67372429 - MGP_CBAJ_P0036998 Fbp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036844.1 MGP_CBAJ_G0020319.1 mouse_genomes_project 13 59084984 59142234 + MGP_CBAJ_P0036844 Pcbd2 protein_coding protein_coding MGP_CBAJ_T0036845.1 MGP_CBAJ_G0020319.1 mouse_genomes_project 13 59084984 59142232 + MGP_CBAJ_P0036845 Pcbd2 protein_coding protein_coding MGP_CBAJ_T0036003.1 MGP_CBAJ_G0019978.1 mouse_genomes_project 13 19742241 19743210 + Trim27 protein_coding processed_transcript MGP_CBAJ_T0036004.1 MGP_CBAJ_G0019978.1 mouse_genomes_project 13 19743006 19757306 + MGP_CBAJ_P0036004 Trim27 protein_coding protein_coding MGP_CBAJ_T0036005.1 MGP_CBAJ_G0019978.1 mouse_genomes_project 13 19752650 19753210 + Trim27 protein_coding retained_intron MGP_CBAJ_T0036006.1 MGP_CBAJ_G0019978.1 mouse_genomes_project 13 19752881 19755265 + MGP_CBAJ_P0036006 Trim27 protein_coding nonsense_mediated_decay MGP_CBAJ_T0101620.1 MGP_CBAJ_G0039651.1 mouse_genomes_project 13 34131372 34135925 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0036500.1 MGP_CBAJ_G0020216.1 mouse_genomes_project 13 47003393 47005628 + MGP_CBAJ_P0036500 protein_coding protein_coding MGP_CBAJ_T0035960.1 MGP_CBAJ_G0019960.1 mouse_genomes_project 13 14092928 14110438 + MGP_CBAJ_P0035960 Inhba protein_coding protein_coding MGP_CBAJ_T0035961.1 MGP_CBAJ_G0019960.1 mouse_genomes_project 13 14095552 14110461 + MGP_CBAJ_P0035961 Inhba protein_coding protein_coding MGP_CBAJ_T0036117.1 MGP_CBAJ_G0020051.1 mouse_genomes_project 13 22570092 22570838 + MGP_CBAJ_P0036117 Hist1h3f protein_coding protein_coding MGP_CBAJ_T0037301.1 MGP_CBAJ_G0020495.1 mouse_genomes_project 13 88467481 88481336 + MGP_CBAJ_P0037301 Cetn3 protein_coding protein_coding MGP_CBAJ_T0036444.1 MGP_CBAJ_G0020197.1 mouse_genomes_project 13 42753737 42777560 + MGP_CBAJ_P0036444 Smim13 protein_coding protein_coding MGP_CBAJ_T0037709.1 MGP_CBAJ_G0020614.1 mouse_genomes_project 13 114577891 114699718 - MGP_CBAJ_P0037709 Rgs7bp protein_coding protein_coding MGP_CBAJ_T0036386.1 MGP_CBAJ_G0020174.1 mouse_genomes_project 13 37815591 38013971 - MGP_CBAJ_P0036386 F13a1 protein_coding protein_coding MGP_CBAJ_T0036387.1 MGP_CBAJ_G0020174.1 mouse_genomes_project 13 37815591 38015562 - MGP_CBAJ_P0036387 F13a1 protein_coding protein_coding MGP_CBAJ_T0037052.1 MGP_CBAJ_G0020389.1 mouse_genomes_project 13 69626203 69632085 + MGP_CBAJ_P0037052 Spata31 protein_coding protein_coding MGP_CBAJ_T0097943.1 MGP_CBAJ_G0036216.1 mouse_genomes_project 13 112897678 112897783 + n-R5s56 rRNA rRNA MGP_CBAJ_T0006532.1 MGP_CBAJ_G0005403.1 mouse_genomes_project 13 107997899 108012087 - 2310020H05Rik lincRNA lincRNA MGP_CBAJ_T0098795.1 MGP_CBAJ_G0037050.1 mouse_genomes_project 13 20091658 20091722 - Gm23779 snRNA snRNA MGP_CBAJ_T0036207.1 MGP_CBAJ_G0020092.1 mouse_genomes_project 13 24253929 24326788 + MGP_CBAJ_P0036207 Dcdc2a protein_coding protein_coding MGP_CBAJ_T0036208.1 MGP_CBAJ_G0020092.1 mouse_genomes_project 13 24254178 24422632 + MGP_CBAJ_P0036208 Dcdc2a protein_coding protein_coding MGP_CBAJ_T0036209.1 MGP_CBAJ_G0020092.1 mouse_genomes_project 13 24301663 24324671 + Dcdc2a protein_coding processed_transcript MGP_CBAJ_T0036210.1 MGP_CBAJ_G0020092.1 mouse_genomes_project 13 24397929 24417550 + Dcdc2a protein_coding processed_transcript MGP_CBAJ_T0036001.1 MGP_CBAJ_G0019977.1 mouse_genomes_project 13 19701688 19702752 - MGP_CBAJ_P0036001 Olfr1368 protein_coding protein_coding MGP_CBAJ_T0036002.1 MGP_CBAJ_G0019977.1 mouse_genomes_project 13 19702314 19705542 - MGP_CBAJ_P0036002 Olfr1368 protein_coding protein_coding MGP_CBAJ_T0037265.1 MGP_CBAJ_G0020486.1 mouse_genomes_project 13 83340422 83856038 + MGP_CBAJ_P0037265 2210408I21Rik protein_coding protein_coding MGP_CBAJ_T0006419.1 MGP_CBAJ_G0005326.1 mouse_genomes_project 13 22222211 22275757 - lincRNA lincRNA MGP_CBAJ_T0012718.1 MGP_CBAJ_G0010830.1 mouse_genomes_project 13 20769743 20770023 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0036620.1 MGP_CBAJ_G0020259.1 mouse_genomes_project 13 54232262 54391288 - MGP_CBAJ_P0036620 Shc3 protein_coding protein_coding MGP_CBAJ_T0012771.1 MGP_CBAJ_G0010883.1 mouse_genomes_project 13 75253266 75253555 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0036084.1 MGP_CBAJ_G0020024.1 mouse_genomes_project 13 21121827 21122766 + MGP_CBAJ_P0036084 Vmn1r200 protein_coding protein_coding MGP_CBAJ_T0097765.1 MGP_CBAJ_G0036038.1 mouse_genomes_project 13 395872 404448 + pseudogene pseudogene MGP_CBAJ_T0036069.1 MGP_CBAJ_G0020013.1 mouse_genomes_project 13 20636639 20644184 + MGP_CBAJ_P0036069 Pom121l2 protein_coding protein_coding MGP_CBAJ_T0036070.1 MGP_CBAJ_G0020013.1 mouse_genomes_project 13 20636965 20639925 + MGP_CBAJ_P0036070 Pom121l2 protein_coding protein_coding MGP_CBAJ_T0037294.1 MGP_CBAJ_G0020492.1 mouse_genomes_project 13 88336742 88349486 + MGP_CBAJ_P0037294 Lysmd3 protein_coding protein_coding MGP_CBAJ_T0097768.1 MGP_CBAJ_G0036041.1 mouse_genomes_project 13 49157117 49157636 + pseudogene pseudogene MGP_CBAJ_T0098815.1 MGP_CBAJ_G0037070.1 mouse_genomes_project 13 97640792 97640894 - Gm24498 snRNA snRNA MGP_CBAJ_T0036108.1 MGP_CBAJ_G0020045.1 mouse_genomes_project 13 22463643 22472877 - MGP_CBAJ_P0036108 Btn1a1 protein_coding protein_coding MGP_CBAJ_T0036109.1 MGP_CBAJ_G0020045.1 mouse_genomes_project 13 22470749 22472903 - MGP_CBAJ_P0036109 Btn1a1 protein_coding protein_coding MGP_CBAJ_T0009833.1 MGP_CBAJ_G0007971.1 mouse_genomes_project 13 99694189 99694338 + miRNA miRNA MGP_CBAJ_T0006446.1 MGP_CBAJ_G0005346.1 mouse_genomes_project 13 31796498 31813510 - 1700018A04Rik lincRNA lincRNA MGP_CBAJ_T0006447.1 MGP_CBAJ_G0005346.1 mouse_genomes_project 13 31798404 31813518 - 1700018A04Rik lincRNA lincRNA MGP_CBAJ_T0006448.1 MGP_CBAJ_G0005346.1 mouse_genomes_project 13 31809291 31813518 - 1700018A04Rik lincRNA lincRNA MGP_CBAJ_T0035926.1 MGP_CBAJ_G0019951.1 mouse_genomes_project 13 11856940 11858314 - MGP_CBAJ_P0035926 Gm18856 protein_coding protein_coding MGP_CBAJ_T0000859.1 MGP_CBAJ_G0000794.1 mouse_genomes_project 13 102890543 102891191 + TEC TEC MGP_CBAJ_T0006548.1 MGP_CBAJ_G0005417.1 mouse_genomes_project 13 122480855 122497305 + Gm15323 lincRNA lincRNA MGP_CBAJ_T0035807.1 MGP_CBAJ_G0019910.1 mouse_genomes_project 13 484353 494917 + MGP_CBAJ_P0035807 Tubal3 protein_coding protein_coding MGP_CBAJ_T0006455.1 MGP_CBAJ_G0005351.1 mouse_genomes_project 13 38468730 38470336 - Gm29459 lincRNA lincRNA MGP_CBAJ_T0036477.1 MGP_CBAJ_G0020210.1 mouse_genomes_project 13 45127581 45208239 - MGP_CBAJ_P0036477 protein_coding protein_coding MGP_CBAJ_T0037132.1 MGP_CBAJ_G0020430.1 mouse_genomes_project 13 72996282 73018977 + MGP_CBAJ_P0037132 Zfp273 protein_coding protein_coding MGP_CBAJ_T0037133.1 MGP_CBAJ_G0020430.1 mouse_genomes_project 13 72996354 72997806 + Zfp273 protein_coding retained_intron MGP_CBAJ_T0037134.1 MGP_CBAJ_G0020430.1 mouse_genomes_project 13 72996358 73018974 + MGP_CBAJ_P0037134 Zfp273 protein_coding protein_coding MGP_CBAJ_T0037043.1 MGP_CBAJ_G0020383.1 mouse_genomes_project 13 68828151 68917610 - MGP_CBAJ_P0037043 Cdc14b protein_coding protein_coding MGP_CBAJ_T0037044.1 MGP_CBAJ_G0020383.1 mouse_genomes_project 13 68828151 68889990 - MGP_CBAJ_P0037044 Cdc14b protein_coding protein_coding MGP_CBAJ_T0037045.1 MGP_CBAJ_G0020383.1 mouse_genomes_project 13 68830953 68917516 - MGP_CBAJ_P0037045 Cdc14b protein_coding protein_coding MGP_CBAJ_T0037046.1 MGP_CBAJ_G0020383.1 mouse_genomes_project 13 68832231 68889924 - MGP_CBAJ_P0037046 Cdc14b protein_coding unknown_likely_coding MGP_CBAJ_T0098816.1 MGP_CBAJ_G0037071.1 mouse_genomes_project 13 102162044 102162144 + Gm24737 snRNA snRNA MGP_CBAJ_T0036555.1 MGP_CBAJ_G0020238.1 mouse_genomes_project 13 51309692 51411580 - MGP_CBAJ_P0036555 Fam120a protein_coding protein_coding MGP_CBAJ_T0037432.1 MGP_CBAJ_G0020524.1 mouse_genomes_project 13 100862726 100876170 + MGP_CBAJ_P0037432 Mtx3 protein_coding protein_coding MGP_CBAJ_T0036481.1 MGP_CBAJ_G0020213.1 mouse_genomes_project 13 45546844 45564866 + MGP_CBAJ_P0036481 Cd83 protein_coding protein_coding MGP_CBAJ_T0037504.1 MGP_CBAJ_G0020551.1 mouse_genomes_project 13 104863776 104894409 + MGP_CBAJ_P0037504 Poc5 protein_coding protein_coding MGP_CBAJ_T0012783.1 MGP_CBAJ_G0010895.1 mouse_genomes_project 13 91672525 91673258 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0036118.1 MGP_CBAJ_G0020052.1 mouse_genomes_project 13 22580149 22580540 - MGP_CBAJ_P0036118 Hist1h4f protein_coding protein_coding MGP_CBAJ_T0101628.1 MGP_CBAJ_G0039659.1 mouse_genomes_project 13 44572595 44573484 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0037889.1 MGP_CBAJ_G0020683.1 mouse_genomes_project 13 131247166 131247563 + MGP_CBAJ_P0037889 protein_coding protein_coding MGP_CBAJ_T0037495.1 MGP_CBAJ_G0020545.1 mouse_genomes_project 13 103904654 103917824 - MGP_CBAJ_P0037495 F2rl1 protein_coding protein_coding MGP_CBAJ_T0098278.1 MGP_CBAJ_G0036547.1 mouse_genomes_project 13 99268441 99268894 - Gm29540 sense_intronic sense_intronic MGP_CBAJ_T0037853.1 MGP_CBAJ_G0020664.1 mouse_genomes_project 13 128379672 128382039 - MGP_CBAJ_P0037853 Gm17509 protein_coding protein_coding MGP_CBAJ_T0036587.1 MGP_CBAJ_G0020247.1 mouse_genomes_project 13 52011523 52042314 + MGP_CBAJ_P0036587 Ecm2 protein_coding protein_coding MGP_CBAJ_T0037710.1 MGP_CBAJ_G0020615.1 mouse_genomes_project 13 114727323 114790022 + MGP_CBAJ_P0037710 4933425L06Rik protein_coding protein_coding MGP_CBAJ_T0037049.1 MGP_CBAJ_G0020386.1 mouse_genomes_project 13 69090435 69101112 + MGP_CBAJ_P0037049 Cdk20 protein_coding protein_coding MGP_CBAJ_T0037173.1 MGP_CBAJ_G0020450.1 mouse_genomes_project 13 79083762 79084929 + MGP_CBAJ_P0037173 Mrpl36 protein_coding protein_coding MGP_CBAJ_T0037447.1 MGP_CBAJ_G0020528.1 mouse_genomes_project 13 101548371 101602035 - MGP_CBAJ_P0037447 Jmy protein_coding unknown_likely_coding MGP_CBAJ_T0002448.1 MGP_CBAJ_G0002360.1 mouse_genomes_project 13 17741912 17750119 + MGP_CBAJ_P0002448 Tcrg-C4 TR_C_gene TR_C_gene MGP_CBAJ_T0036920.1 MGP_CBAJ_G0020344.1 mouse_genomes_project 13 62233528 62246328 - MGP_CBAJ_P0036920 Slc28a3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036921.1 MGP_CBAJ_G0020344.1 mouse_genomes_project 13 62241406 62304700 - MGP_CBAJ_P0036921 Slc28a3 protein_coding protein_coding MGP_CBAJ_T0036922.1 MGP_CBAJ_G0020344.1 mouse_genomes_project 13 62273796 62304700 - MGP_CBAJ_P0036922 Slc28a3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036923.1 MGP_CBAJ_G0020344.1 mouse_genomes_project 13 62280380 62304692 - Slc28a3 protein_coding retained_intron MGP_CBAJ_T0037453.1 MGP_CBAJ_G0020532.1 mouse_genomes_project 13 101939379 102149852 + MGP_CBAJ_P0037453 Arsb protein_coding protein_coding MGP_CBAJ_T0036898.1 MGP_CBAJ_G0020340.1 mouse_genomes_project 13 61949067 62017504 - MGP_CBAJ_P0036898 Kif27 protein_coding protein_coding MGP_CBAJ_T0006417.1 MGP_CBAJ_G0005324.1 mouse_genomes_project 13 6550820 6555422 + Gm26601 lincRNA lincRNA MGP_CBAJ_T0036978.1 MGP_CBAJ_G0020358.1 mouse_genomes_project 13 64726632 64731227 - MGP_CBAJ_P0036978 Ctsll3 protein_coding protein_coding MGP_CBAJ_T0098801.1 MGP_CBAJ_G0037056.1 mouse_genomes_project 13 36478319 36478461 + Gm22126 snRNA snRNA MGP_CBAJ_T0036498.1 MGP_CBAJ_G0020215.1 mouse_genomes_project 13 46834293 46922362 - MGP_CBAJ_P0036498 Dtnbp1 protein_coding protein_coding MGP_CBAJ_T0036499.1 MGP_CBAJ_G0020215.1 mouse_genomes_project 13 46834299 46922362 - MGP_CBAJ_P0036499 Dtnbp1 protein_coding protein_coding MGP_CBAJ_T0036980.1 MGP_CBAJ_G0020360.1 mouse_genomes_project 13 64825130 64827222 - MGP_CBAJ_P0036980 Ctla2b protein_coding protein_coding MGP_CBAJ_T0036981.1 MGP_CBAJ_G0020360.1 mouse_genomes_project 13 64825130 64827222 - MGP_CBAJ_P0036981 Ctla2b protein_coding protein_coding MGP_CBAJ_T0100062.1 MGP_CBAJ_G0038317.1 mouse_genomes_project 13 59586693 59586826 + Gm25148 snoRNA snoRNA MGP_CBAJ_T0036836.1 MGP_CBAJ_G0020315.1 mouse_genomes_project 13 58958105 58971146 + MGP_CBAJ_P0036836 Caml protein_coding protein_coding MGP_CBAJ_T0036837.1 MGP_CBAJ_G0020315.1 mouse_genomes_project 13 58958298 58960349 + Caml protein_coding retained_intron MGP_CBAJ_T0036838.1 MGP_CBAJ_G0020315.1 mouse_genomes_project 13 58966873 58971146 + Caml protein_coding retained_intron MGP_CBAJ_T0036502.1 MGP_CBAJ_G0020218.1 mouse_genomes_project 13 47457952 47504715 + MGP_CBAJ_P0036502 Gmpr protein_coding protein_coding MGP_CBAJ_T0036503.1 MGP_CBAJ_G0020218.1 mouse_genomes_project 13 47469176 47504231 + MGP_CBAJ_P0036503 Gmpr protein_coding protein_coding MGP_CBAJ_T0036504.1 MGP_CBAJ_G0020218.1 mouse_genomes_project 13 47497144 47500883 + Gmpr protein_coding retained_intron MGP_CBAJ_T0012701.1 MGP_CBAJ_G0010813.1 mouse_genomes_project 13 7508 8292 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0036099.1 MGP_CBAJ_G0020039.1 mouse_genomes_project 13 21996820 21997717 + MGP_CBAJ_P0036099 Vmn1r218 protein_coding protein_coding MGP_CBAJ_T0002447.1 MGP_CBAJ_G0002359.1 mouse_genomes_project 13 17698923 17701550 - MGP_CBAJ_P0002447 Tcrg-C2 TR_C_gene TR_C_gene MGP_CBAJ_T0009813.1 MGP_CBAJ_G0007951.1 mouse_genomes_project 13 54620033 54620141 + Gm23566 miRNA miRNA MGP_CBAJ_T0037140.1 MGP_CBAJ_G0020435.1 mouse_genomes_project 13 73938420 73955064 + MGP_CBAJ_P0037140 1700001L19Rik protein_coding protein_coding MGP_CBAJ_T0037002.1 MGP_CBAJ_G0020376.1 mouse_genomes_project 13 67853302 67958529 - MGP_CBAJ_P0037002 Fancc protein_coding protein_coding MGP_CBAJ_T0037003.1 MGP_CBAJ_G0020376.1 mouse_genomes_project 13 67853307 67858949 - Fancc protein_coding processed_transcript MGP_CBAJ_T0037004.1 MGP_CBAJ_G0020376.1 mouse_genomes_project 13 67853308 67990475 - MGP_CBAJ_P0037004 Fancc protein_coding protein_coding MGP_CBAJ_T0037005.1 MGP_CBAJ_G0020376.1 mouse_genomes_project 13 67854049 67866763 - Fancc protein_coding processed_transcript MGP_CBAJ_T0037006.1 MGP_CBAJ_G0020376.1 mouse_genomes_project 13 67858053 67990472 - Fancc protein_coding retained_intron MGP_CBAJ_T0037007.1 MGP_CBAJ_G0020376.1 mouse_genomes_project 13 67863043 67873609 - Fancc protein_coding processed_transcript MGP_CBAJ_T0037008.1 MGP_CBAJ_G0020376.1 mouse_genomes_project 13 67872283 67896846 - Fancc protein_coding processed_transcript MGP_CBAJ_T0037009.1 MGP_CBAJ_G0020376.1 mouse_genomes_project 13 67872283 67990495 - Fancc protein_coding retained_intron MGP_CBAJ_T0037010.1 MGP_CBAJ_G0020376.1 mouse_genomes_project 13 67885197 67952568 - MGP_CBAJ_P0037010 Fancc protein_coding protein_coding MGP_CBAJ_T0037011.1 MGP_CBAJ_G0020376.1 mouse_genomes_project 13 67892095 67987639 - MGP_CBAJ_P0037011 Fancc protein_coding protein_coding MGP_CBAJ_T0037012.1 MGP_CBAJ_G0020376.1 mouse_genomes_project 13 67892146 67960588 - MGP_CBAJ_P0037012 Fancc protein_coding protein_coding MGP_CBAJ_T0037013.1 MGP_CBAJ_G0020376.1 mouse_genomes_project 13 67892155 67952695 - Fancc protein_coding retained_intron MGP_CBAJ_T0037014.1 MGP_CBAJ_G0020376.1 mouse_genomes_project 13 67892185 68057225 - MGP_CBAJ_P0037014 Fancc protein_coding protein_coding MGP_CBAJ_T0037015.1 MGP_CBAJ_G0020376.1 mouse_genomes_project 13 67957277 67990433 - MGP_CBAJ_P0037015 Fancc protein_coding protein_coding MGP_CBAJ_T0037016.1 MGP_CBAJ_G0020376.1 mouse_genomes_project 13 67957334 67964059 - MGP_CBAJ_P0037016 Fancc protein_coding protein_coding MGP_CBAJ_T0036982.1 MGP_CBAJ_G0020361.1 mouse_genomes_project 13 64832694 64837362 - MGP_CBAJ_P0036982 Tpbpb protein_coding protein_coding MGP_CBAJ_T0035832.1 MGP_CBAJ_G0019923.1 mouse_genomes_project 13 3207626 3212061 + MGP_CBAJ_P0035832 Gm28465 protein_coding protein_coding MGP_CBAJ_T0006520.1 MGP_CBAJ_G0005395.1 mouse_genomes_project 13 102147825 102149851 - Gm26527 lincRNA lincRNA MGP_CBAJ_T0006440.1 MGP_CBAJ_G0005342.1 mouse_genomes_project 13 31537024 31539215 - Gm11374 lincRNA lincRNA MGP_CBAJ_T0098803.1 MGP_CBAJ_G0037058.1 mouse_genomes_project 13 43113782 43113948 - Gm24819 snRNA snRNA MGP_CBAJ_T0037874.1 MGP_CBAJ_G0020672.1 mouse_genomes_project 13 130905795 130928903 + MGP_CBAJ_P0037874 4833420G17Rik protein_coding protein_coding MGP_CBAJ_T0006541.1 MGP_CBAJ_G0005411.1 mouse_genomes_project 13 121739184 121747937 - Gm6270 lincRNA lincRNA MGP_CBAJ_T0036986.1 MGP_CBAJ_G0020365.1 mouse_genomes_project 13 64972238 64977616 - MGP_CBAJ_P0036986 Ctsq protein_coding protein_coding MGP_CBAJ_T0036987.1 MGP_CBAJ_G0020365.1 mouse_genomes_project 13 64972248 64975175 - Ctsq protein_coding retained_intron MGP_CBAJ_T0035906.1 MGP_CBAJ_G0019939.1 mouse_genomes_project 13 9692805 9768348 - MGP_CBAJ_P0035906 Actn2 protein_coding protein_coding MGP_CBAJ_T0035907.1 MGP_CBAJ_G0019939.1 mouse_genomes_project 13 9692814 9768312 - MGP_CBAJ_P0035907 Actn2 protein_coding protein_coding MGP_CBAJ_T0035908.1 MGP_CBAJ_G0019939.1 mouse_genomes_project 13 9731445 9768320 - MGP_CBAJ_P0035908 Actn2 protein_coding protein_coding MGP_CBAJ_T0006457.1 MGP_CBAJ_G0005353.1 mouse_genomes_project 13 38541301 38544412 + Gm29590 lincRNA lincRNA MGP_CBAJ_T0037451.1 MGP_CBAJ_G0020531.1 mouse_genomes_project 13 101820879 101915508 + MGP_CBAJ_P0037451 Dmgdh protein_coding protein_coding MGP_CBAJ_T0037452.1 MGP_CBAJ_G0020531.1 mouse_genomes_project 13 101865787 101866422 + Dmgdh protein_coding processed_transcript MGP_CBAJ_T0101608.1 MGP_CBAJ_G0039639.1 mouse_genomes_project 13 21907953 21908879 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0036114.1 MGP_CBAJ_G0020048.1 mouse_genomes_project 13 22554201 22555414 + MGP_CBAJ_P0036114 Hist1h3g protein_coding protein_coding MGP_CBAJ_T0037120.1 MGP_CBAJ_G0020424.1 mouse_genomes_project 13 72693794 72744708 - MGP_CBAJ_P0037120 Zfp729a protein_coding protein_coding MGP_CBAJ_T0006450.1 MGP_CBAJ_G0005348.1 mouse_genomes_project 13 32720476 32724256 - Gm11381 lincRNA lincRNA MGP_CBAJ_T0035886.1 MGP_CBAJ_G0019935.1 mouse_genomes_project 13 6854042 6906040 - MGP_CBAJ_P0035886 Zmynd11 protein_coding protein_coding MGP_CBAJ_T0035887.1 MGP_CBAJ_G0019935.1 mouse_genomes_project 13 6854051 6860484 - Zmynd11 protein_coding retained_intron MGP_CBAJ_T0035888.1 MGP_CBAJ_G0019935.1 mouse_genomes_project 13 6858349 6859721 - Zmynd11 protein_coding retained_intron MGP_CBAJ_T0035889.1 MGP_CBAJ_G0019935.1 mouse_genomes_project 13 6862685 6865350 - Zmynd11 protein_coding retained_intron MGP_CBAJ_T0035890.1 MGP_CBAJ_G0019935.1 mouse_genomes_project 13 6863497 6940058 - MGP_CBAJ_P0035890 Zmynd11 protein_coding protein_coding MGP_CBAJ_T0035891.1 MGP_CBAJ_G0019935.1 mouse_genomes_project 13 6864343 6939237 - MGP_CBAJ_P0035891 Zmynd11 protein_coding protein_coding MGP_CBAJ_T0035892.1 MGP_CBAJ_G0019935.1 mouse_genomes_project 13 6866854 6939725 - MGP_CBAJ_P0035892 Zmynd11 protein_coding protein_coding MGP_CBAJ_T0035893.1 MGP_CBAJ_G0019935.1 mouse_genomes_project 13 6866854 6940109 - MGP_CBAJ_P0035893 Zmynd11 protein_coding protein_coding MGP_CBAJ_T0035894.1 MGP_CBAJ_G0019935.1 mouse_genomes_project 13 6866873 6906369 - Zmynd11 protein_coding processed_transcript MGP_CBAJ_T0035895.1 MGP_CBAJ_G0019935.1 mouse_genomes_project 13 6866910 6906011 - Zmynd11 protein_coding processed_transcript MGP_CBAJ_T0035896.1 MGP_CBAJ_G0019935.1 mouse_genomes_project 13 6866913 6939211 - MGP_CBAJ_P0035896 Zmynd11 protein_coding protein_coding MGP_CBAJ_T0035897.1 MGP_CBAJ_G0019935.1 mouse_genomes_project 13 6867868 6906477 - MGP_CBAJ_P0035897 Zmynd11 protein_coding protein_coding MGP_CBAJ_T0035898.1 MGP_CBAJ_G0019935.1 mouse_genomes_project 13 6879103 6939247 - MGP_CBAJ_P0035898 Zmynd11 protein_coding protein_coding MGP_CBAJ_T0000840.1 MGP_CBAJ_G0000776.1 mouse_genomes_project 13 38546022 38546363 - TEC TEC MGP_CBAJ_T0036135.1 MGP_CBAJ_G0020065.1 mouse_genomes_project 13 22820837 22821656 - MGP_CBAJ_P0036135 Hist1h3c protein_coding protein_coding MGP_CBAJ_T0037572.1 MGP_CBAJ_G0020574.1 mouse_genomes_project 13 107740563 107826758 - MGP_CBAJ_P0037572 Tnpo1 protein_coding protein_coding MGP_CBAJ_T0037573.1 MGP_CBAJ_G0020574.1 mouse_genomes_project 13 107743287 107787601 - MGP_CBAJ_P0037573 Tnpo1 protein_coding protein_coding MGP_CBAJ_T0037574.1 MGP_CBAJ_G0020574.1 mouse_genomes_project 13 107772262 107787617 - MGP_CBAJ_P0037574 Tnpo1 protein_coding protein_coding MGP_CBAJ_T0037048.1 MGP_CBAJ_G0020385.1 mouse_genomes_project 13 69014085 69020981 - MGP_CBAJ_P0037048 Ctsl protein_coding protein_coding MGP_CBAJ_T0009815.1 MGP_CBAJ_G0007953.1 mouse_genomes_project 13 58764033 58764099 + Mir6943 miRNA miRNA MGP_CBAJ_T0036617.1 MGP_CBAJ_G0020256.1 mouse_genomes_project 13 53862295 53915223 + MGP_CBAJ_P0036617 Spin1 protein_coding protein_coding MGP_CBAJ_T0003369.1 MGP_CBAJ_G0003093.1 mouse_genomes_project 13 29974181 29976160 + Gm11365 antisense antisense MGP_CBAJ_T0098822.1 MGP_CBAJ_G0037077.1 mouse_genomes_project 13 122817083 122817236 + Gm22768 snRNA snRNA MGP_CBAJ_T0037549.1 MGP_CBAJ_G0020566.1 mouse_genomes_project 13 107079832 107090419 + MGP_CBAJ_P0037549 Ankra2 protein_coding protein_coding MGP_CBAJ_T0037550.1 MGP_CBAJ_G0020566.1 mouse_genomes_project 13 107079835 107090421 + MGP_CBAJ_P0037550 Ankra2 protein_coding protein_coding MGP_CBAJ_T0037551.1 MGP_CBAJ_G0020566.1 mouse_genomes_project 13 107079900 107091253 + MGP_CBAJ_P0037551 Ankra2 protein_coding protein_coding MGP_CBAJ_T0037552.1 MGP_CBAJ_G0020566.1 mouse_genomes_project 13 107080064 107090420 + MGP_CBAJ_P0037552 Ankra2 protein_coding protein_coding MGP_CBAJ_T0037553.1 MGP_CBAJ_G0020566.1 mouse_genomes_project 13 107084932 107087970 + Ankra2 protein_coding retained_intron MGP_CBAJ_T0011225.1 MGP_CBAJ_G0009363.1 mouse_genomes_project 13 44762714 44762977 - Gm26086 misc_RNA misc_RNA MGP_CBAJ_T0000847.1 MGP_CBAJ_G0000782.1 mouse_genomes_project 13 54902576 54904718 - TEC TEC MGP_CBAJ_T0037490.1 MGP_CBAJ_G0020541.1 mouse_genomes_project 13 103681519 103696653 + MGP_CBAJ_P0037490 Zbed3 protein_coding protein_coding MGP_CBAJ_T0037636.1 MGP_CBAJ_G0020597.1 mouse_genomes_project 13 109958803 109962061 - Ccnb1 protein_coding retained_intron MGP_CBAJ_T0037637.1 MGP_CBAJ_G0020597.1 mouse_genomes_project 13 109959568 109967010 - MGP_CBAJ_P0037637 Ccnb1 protein_coding protein_coding MGP_CBAJ_T0037638.1 MGP_CBAJ_G0020597.1 mouse_genomes_project 13 109959912 109962641 - Ccnb1 protein_coding retained_intron MGP_CBAJ_T0037639.1 MGP_CBAJ_G0020597.1 mouse_genomes_project 13 109960666 109967010 - MGP_CBAJ_P0037639 Ccnb1 protein_coding protein_coding MGP_CBAJ_T0037640.1 MGP_CBAJ_G0020597.1 mouse_genomes_project 13 109963651 109966211 - Ccnb1 protein_coding retained_intron MGP_CBAJ_T0037641.1 MGP_CBAJ_G0020597.1 mouse_genomes_project 13 109966144 109967083 - Ccnb1 protein_coding retained_intron MGP_CBAJ_T0009801.1 MGP_CBAJ_G0007939.1 mouse_genomes_project 13 22740454 22740592 + Gm44350 miRNA miRNA MGP_CBAJ_T0036673.1 MGP_CBAJ_G0020276.1 mouse_genomes_project 13 57503256 57515625 + MGP_CBAJ_P0036673 Cplx2 protein_coding protein_coding MGP_CBAJ_T0000861.1 MGP_CBAJ_G0000796.1 mouse_genomes_project 13 108604875 108605705 + TEC TEC MGP_CBAJ_T0037274.1 MGP_CBAJ_G0020490.1 mouse_genomes_project 13 87491085 87497348 + Arrdc3 protein_coding retained_intron MGP_CBAJ_T0037275.1 MGP_CBAJ_G0020490.1 mouse_genomes_project 13 87491111 87503740 + MGP_CBAJ_P0037275 Arrdc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037276.1 MGP_CBAJ_G0020490.1 mouse_genomes_project 13 87491353 87503740 + MGP_CBAJ_P0037276 Arrdc3 protein_coding protein_coding MGP_CBAJ_T0037277.1 MGP_CBAJ_G0020490.1 mouse_genomes_project 13 87497808 87498957 + Arrdc3 protein_coding retained_intron MGP_CBAJ_T0037278.1 MGP_CBAJ_G0020490.1 mouse_genomes_project 13 87498222 87499347 + Arrdc3 protein_coding retained_intron MGP_CBAJ_T0037469.1 MGP_CBAJ_G0020539.1 mouse_genomes_project 13 103291643 103337752 + MGP_CBAJ_P0037469 Wdr41 protein_coding protein_coding MGP_CBAJ_T0037470.1 MGP_CBAJ_G0020539.1 mouse_genomes_project 13 103291647 103346533 + MGP_CBAJ_P0037470 Wdr41 protein_coding protein_coding MGP_CBAJ_T0037471.1 MGP_CBAJ_G0020539.1 mouse_genomes_project 13 103291647 103346532 + MGP_CBAJ_P0037471 Wdr41 protein_coding protein_coding MGP_CBAJ_T0037472.1 MGP_CBAJ_G0020539.1 mouse_genomes_project 13 103291737 103337698 + MGP_CBAJ_P0037472 Wdr41 protein_coding protein_coding MGP_CBAJ_T0037473.1 MGP_CBAJ_G0020539.1 mouse_genomes_project 13 103291737 103337698 + MGP_CBAJ_P0037473 Wdr41 protein_coding protein_coding MGP_CBAJ_T0037474.1 MGP_CBAJ_G0020539.1 mouse_genomes_project 13 103291737 103337698 + MGP_CBAJ_P0037474 Wdr41 protein_coding protein_coding MGP_CBAJ_T0036239.1 MGP_CBAJ_G0020108.1 mouse_genomes_project 13 27202194 27213917 - MGP_CBAJ_P0036239 Prl7b1 protein_coding protein_coding MGP_CBAJ_T0036056.1 MGP_CBAJ_G0020008.1 mouse_genomes_project 13 20420824 20474955 + MGP_CBAJ_P0036056 Hist1h2bq protein_coding protein_coding MGP_CBAJ_T0036057.1 MGP_CBAJ_G0020008.1 mouse_genomes_project 13 20420824 20475155 + MGP_CBAJ_P0036057 Hist1h2bq protein_coding protein_coding MGP_CBAJ_T0097769.1 MGP_CBAJ_G0036042.1 mouse_genomes_project 13 97251619 97253948 - pseudogene pseudogene MGP_CBAJ_T0037234.1 MGP_CBAJ_G0020475.1 mouse_genomes_project 13 81128176 81170805 + MGP_CBAJ_P0037234 Pcsk1 protein_coding protein_coding MGP_CBAJ_T0037235.1 MGP_CBAJ_G0020475.1 mouse_genomes_project 13 81128266 81144954 + Pcsk1 protein_coding retained_intron MGP_CBAJ_T0006521.1 MGP_CBAJ_G0005396.1 mouse_genomes_project 13 102380941 102383612 - Gm15907 lincRNA lincRNA MGP_CBAJ_T0012794.1 MGP_CBAJ_G0010906.1 mouse_genomes_project 13 114537944 114538352 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0036152.1 MGP_CBAJ_G0020077.1 mouse_genomes_project 13 22986530 23003664 - MGP_CBAJ_P0036152 Slc17a4 protein_coding protein_coding MGP_CBAJ_T0036153.1 MGP_CBAJ_G0020077.1 mouse_genomes_project 13 22986681 23003666 - MGP_CBAJ_P0036153 Slc17a4 protein_coding protein_coding MGP_CBAJ_T0036094.1 MGP_CBAJ_G0020034.1 mouse_genomes_project 13 21855616 21857769 + MGP_CBAJ_P0036094 Vmn1r213 protein_coding protein_coding MGP_CBAJ_T0003399.1 MGP_CBAJ_G0003113.1 mouse_genomes_project 13 74989166 74990128 - A530095I07Rik antisense antisense MGP_CBAJ_T0036223.1 MGP_CBAJ_G0020099.1 mouse_genomes_project 13 26796912 26805648 + MGP_CBAJ_P0036223 Prl3b1 protein_coding protein_coding MGP_CBAJ_T0009788.1 MGP_CBAJ_G0007926.1 mouse_genomes_project 13 2562421 2562512 - Gm26043 miRNA miRNA MGP_CBAJ_T0036103.1 MGP_CBAJ_G0020043.1 mouse_genomes_project 13 22313234 22330887 - MGP_CBAJ_P0036103 Zfp322a protein_coding protein_coding MGP_CBAJ_T0036104.1 MGP_CBAJ_G0020043.1 mouse_genomes_project 13 22318709 22330679 - MGP_CBAJ_P0036104 Zfp322a protein_coding protein_coding MGP_CBAJ_T0036105.1 MGP_CBAJ_G0020043.1 mouse_genomes_project 13 22318710 22330880 - MGP_CBAJ_P0036105 Zfp322a protein_coding protein_coding MGP_CBAJ_T0036106.1 MGP_CBAJ_G0020043.1 mouse_genomes_project 13 22318871 22330873 - MGP_CBAJ_P0036106 Zfp322a protein_coding protein_coding MGP_CBAJ_T0036128.1 MGP_CBAJ_G0020060.1 mouse_genomes_project 13 22761880 22762606 + MGP_CBAJ_P0036128 Hist1h1t protein_coding protein_coding MGP_CBAJ_T0035974.1 MGP_CBAJ_G0019967.1 mouse_genomes_project 13 17320152 17521669 + MGP_CBAJ_P0035974 Amph protein_coding protein_coding MGP_CBAJ_T0035975.1 MGP_CBAJ_G0019967.1 mouse_genomes_project 13 17320172 17521672 + MGP_CBAJ_P0035975 Amph protein_coding protein_coding MGP_CBAJ_T0035976.1 MGP_CBAJ_G0019967.1 mouse_genomes_project 13 17320199 17470537 + Amph protein_coding retained_intron MGP_CBAJ_T0035977.1 MGP_CBAJ_G0019967.1 mouse_genomes_project 13 17486846 17488753 + Amph protein_coding retained_intron MGP_CBAJ_T0035978.1 MGP_CBAJ_G0019967.1 mouse_genomes_project 13 17488517 17512874 + Amph protein_coding processed_transcript MGP_CBAJ_T0003434.1 MGP_CBAJ_G0003132.1 mouse_genomes_project 13 121984454 122002279 - antisense antisense MGP_CBAJ_T0037216.1 MGP_CBAJ_G0020468.1 mouse_genomes_project 13 80158192 80172398 - MGP_CBAJ_P0037216 Pdcd6 protein_coding protein_coding MGP_CBAJ_T0037528.1 MGP_CBAJ_G0020557.1 mouse_genomes_project 13 105516449 105542605 + MGP_CBAJ_P0037528 Gcnt4 protein_coding protein_coding MGP_CBAJ_T0036041.1 MGP_CBAJ_G0019995.1 mouse_genomes_project 13 20232468 20233453 - MGP_CBAJ_P0036041 Olfr1362 protein_coding protein_coding MGP_CBAJ_T0035956.1 MGP_CBAJ_G0019959.1 mouse_genomes_project 13 13506557 13774890 + MGP_CBAJ_P0035956 Gli3 protein_coding protein_coding MGP_CBAJ_T0035957.1 MGP_CBAJ_G0019959.1 mouse_genomes_project 13 13506573 13696367 + Gli3 protein_coding processed_transcript MGP_CBAJ_T0035958.1 MGP_CBAJ_G0019959.1 mouse_genomes_project 13 13507045 13719599 + Gli3 protein_coding retained_intron MGP_CBAJ_T0035959.1 MGP_CBAJ_G0019959.1 mouse_genomes_project 13 13507302 13789816 + MGP_CBAJ_P0035959 Gli3 protein_coding protein_coding MGP_CBAJ_T0012714.1 MGP_CBAJ_G0010826.1 mouse_genomes_project 13 20551587 20553216 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0036053.1 MGP_CBAJ_G0020005.1 mouse_genomes_project 13 20410843 20411586 - MGP_CBAJ_P0036053 Hist1h1b protein_coding protein_coding MGP_CBAJ_T0037383.1 MGP_CBAJ_G0020510.1 mouse_genomes_project 13 99365869 99632700 + Ssbp2 protein_coding processed_transcript MGP_CBAJ_T0037384.1 MGP_CBAJ_G0020510.1 mouse_genomes_project 13 99366691 99648698 + MGP_CBAJ_P0037384 Ssbp2 protein_coding protein_coding MGP_CBAJ_T0037385.1 MGP_CBAJ_G0020510.1 mouse_genomes_project 13 99366732 99646414 + MGP_CBAJ_P0037385 Ssbp2 protein_coding protein_coding MGP_CBAJ_T0037386.1 MGP_CBAJ_G0020510.1 mouse_genomes_project 13 99366768 99468981 + MGP_CBAJ_P0037386 Ssbp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037387.1 MGP_CBAJ_G0020510.1 mouse_genomes_project 13 99366801 99616431 + Ssbp2 protein_coding retained_intron MGP_CBAJ_T0037388.1 MGP_CBAJ_G0020510.1 mouse_genomes_project 13 99366804 99495345 + Ssbp2 protein_coding retained_intron MGP_CBAJ_T0037389.1 MGP_CBAJ_G0020510.1 mouse_genomes_project 13 99366822 99446072 + Ssbp2 protein_coding retained_intron MGP_CBAJ_T0037390.1 MGP_CBAJ_G0020510.1 mouse_genomes_project 13 99614458 99636535 + Ssbp2 protein_coding retained_intron MGP_CBAJ_T0098807.1 MGP_CBAJ_G0037062.1 mouse_genomes_project 13 46941486 46941590 - Gm23104 snRNA snRNA MGP_CBAJ_T0006517.1 MGP_CBAJ_G0005392.1 mouse_genomes_project 13 90791095 90836593 + 2810049E08Rik lincRNA lincRNA MGP_CBAJ_T0036292.1 MGP_CBAJ_G0020134.1 mouse_genomes_project 13 33097454 33183286 - MGP_CBAJ_P0036292 Mylk4 protein_coding protein_coding MGP_CBAJ_T0036293.1 MGP_CBAJ_G0020134.1 mouse_genomes_project 13 33105017 33183223 - MGP_CBAJ_P0036293 Mylk4 protein_coding protein_coding MGP_CBAJ_T0036294.1 MGP_CBAJ_G0020134.1 mouse_genomes_project 13 33109208 33137198 - MGP_CBAJ_P0036294 Mylk4 protein_coding unknown_likely_coding MGP_CBAJ_T0036295.1 MGP_CBAJ_G0020134.1 mouse_genomes_project 13 33168018 33185461 - Mylk4 protein_coding processed_transcript MGP_CBAJ_T0037533.1 MGP_CBAJ_G0020561.1 mouse_genomes_project 13 105773667 105817680 + MGP_CBAJ_P0037533 Gfm2 protein_coding protein_coding MGP_CBAJ_T0037534.1 MGP_CBAJ_G0020561.1 mouse_genomes_project 13 105773667 105791315 + MGP_CBAJ_P0037534 Gfm2 protein_coding protein_coding MGP_CBAJ_T0037535.1 MGP_CBAJ_G0020561.1 mouse_genomes_project 13 105773707 105815873 + Gfm2 protein_coding retained_intron MGP_CBAJ_T0037536.1 MGP_CBAJ_G0020561.1 mouse_genomes_project 13 105773708 105817690 + MGP_CBAJ_P0037536 Gfm2 protein_coding protein_coding MGP_CBAJ_T0037537.1 MGP_CBAJ_G0020561.1 mouse_genomes_project 13 105773715 105809931 + MGP_CBAJ_P0037537 Gfm2 protein_coding protein_coding MGP_CBAJ_T0037538.1 MGP_CBAJ_G0020561.1 mouse_genomes_project 13 105773728 105780166 + Gfm2 protein_coding retained_intron MGP_CBAJ_T0037539.1 MGP_CBAJ_G0020561.1 mouse_genomes_project 13 105773732 105822434 + MGP_CBAJ_P0037539 Gfm2 protein_coding protein_coding MGP_CBAJ_T0037540.1 MGP_CBAJ_G0020561.1 mouse_genomes_project 13 105773738 105782134 + MGP_CBAJ_P0037540 Gfm2 protein_coding protein_coding MGP_CBAJ_T0037541.1 MGP_CBAJ_G0020561.1 mouse_genomes_project 13 105773770 105817690 + MGP_CBAJ_P0037541 Gfm2 protein_coding protein_coding MGP_CBAJ_T0037542.1 MGP_CBAJ_G0020561.1 mouse_genomes_project 13 105786187 105804669 + MGP_CBAJ_P0037542 Gfm2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037543.1 MGP_CBAJ_G0020561.1 mouse_genomes_project 13 105801045 105817690 + Gfm2 protein_coding retained_intron MGP_CBAJ_T0037544.1 MGP_CBAJ_G0020561.1 mouse_genomes_project 13 105812689 105818725 + Gfm2 protein_coding retained_intron MGP_CBAJ_T0037876.1 MGP_CBAJ_G0020674.1 mouse_genomes_project 13 130930723 130943350 + MGP_CBAJ_P0037876 protein_coding protein_coding MGP_CBAJ_T0037877.1 MGP_CBAJ_G0020674.1 mouse_genomes_project 13 130930821 130943350 + MGP_CBAJ_P0037877 protein_coding protein_coding MGP_CBAJ_T0037878.1 MGP_CBAJ_G0020674.1 mouse_genomes_project 13 130940415 130943408 + MGP_CBAJ_P0037878 protein_coding protein_coding MGP_CBAJ_T0101625.1 MGP_CBAJ_G0039656.1 mouse_genomes_project 13 34332766 34333920 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0101268.1 MGP_CBAJ_G0039397.1 mouse_genomes_project 13 22671458 22671778 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0037053.1 MGP_CBAJ_G0020390.1 mouse_genomes_project 13 69729761 69734744 + MGP_CBAJ_P0037053 Spata31d1c protein_coding protein_coding MGP_CBAJ_T0036513.1 MGP_CBAJ_G0020224.1 mouse_genomes_project 13 48778364 48788490 + MGP_CBAJ_P0036513 Fam8a1 protein_coding protein_coding MGP_CBAJ_T0036514.1 MGP_CBAJ_G0020224.1 mouse_genomes_project 13 48781427 48784051 + Fam8a1 protein_coding retained_intron MGP_CBAJ_T0036281.1 MGP_CBAJ_G0020127.1 mouse_genomes_project 13 31093368 31094555 - MGP_CBAJ_P0036281 Hus1b protein_coding protein_coding MGP_CBAJ_T0035916.1 MGP_CBAJ_G0019942.1 mouse_genomes_project 13 9913216 9967165 - MGP_CBAJ_P0035916 Edaradd protein_coding protein_coding MGP_CBAJ_T0036552.1 MGP_CBAJ_G0020235.1 mouse_genomes_project 13 50950041 50997732 - MGP_CBAJ_P0036552 Ptpdc1 protein_coding protein_coding MGP_CBAJ_T0012724.1 MGP_CBAJ_G0010836.1 mouse_genomes_project 13 22253681 22253829 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006484.1 MGP_CBAJ_G0005369.1 mouse_genomes_project 13 56403180 56413961 - Gm43262 lincRNA lincRNA MGP_CBAJ_T0036802.1 MGP_CBAJ_G0020305.1 mouse_genomes_project 13 58721777 58734115 - MGP_CBAJ_P0036802 F12 protein_coding protein_coding MGP_CBAJ_T0036803.1 MGP_CBAJ_G0020305.1 mouse_genomes_project 13 58721881 58734101 - MGP_CBAJ_P0036803 F12 protein_coding protein_coding MGP_CBAJ_T0003435.1 MGP_CBAJ_G0003133.1 mouse_genomes_project 13 128942246 128962421 - 4933413L06Rik antisense antisense MGP_CBAJ_T0003436.1 MGP_CBAJ_G0003133.1 mouse_genomes_project 13 128942509 128962397 - 4933413L06Rik antisense antisense MGP_CBAJ_T0036240.1 MGP_CBAJ_G0020109.1 mouse_genomes_project 13 27243740 27252490 - MGP_CBAJ_P0036240 Prl7a1 protein_coding protein_coding MGP_CBAJ_T0036241.1 MGP_CBAJ_G0020109.1 mouse_genomes_project 13 27243740 27252480 - MGP_CBAJ_P0036241 Prl7a1 protein_coding protein_coding MGP_CBAJ_T0036101.1 MGP_CBAJ_G0020041.1 mouse_genomes_project 13 22044098 22044995 - MGP_CBAJ_P0036101 Vmn1r220 protein_coding protein_coding MGP_CBAJ_T0036360.1 MGP_CBAJ_G0020163.1 mouse_genomes_project 13 35579357 35609309 + MGP_CBAJ_P0036360 Prpf4b protein_coding protein_coding MGP_CBAJ_T0037604.1 MGP_CBAJ_G0020586.1 mouse_genomes_project 13 109512346 109562912 - MGP_CBAJ_P0037604 Naip1 protein_coding protein_coding MGP_CBAJ_T0000839.1 MGP_CBAJ_G0000775.1 mouse_genomes_project 13 17791485 17793820 - TEC TEC MGP_CBAJ_T0036031.1 MGP_CBAJ_G0019989.1 mouse_genomes_project 13 20106368 20106781 + MGP_CBAJ_P0036031 protein_coding protein_coding MGP_CBAJ_T0037684.1 MGP_CBAJ_G0020606.1 mouse_genomes_project 13 113669588 113713782 - MGP_CBAJ_P0037684 Trappc13 protein_coding protein_coding MGP_CBAJ_T0037685.1 MGP_CBAJ_G0020606.1 mouse_genomes_project 13 113669595 113713738 - MGP_CBAJ_P0037685 Trappc13 protein_coding protein_coding MGP_CBAJ_T0037686.1 MGP_CBAJ_G0020606.1 mouse_genomes_project 13 113670752 113713736 - MGP_CBAJ_P0037686 Trappc13 protein_coding protein_coding MGP_CBAJ_T0037687.1 MGP_CBAJ_G0020606.1 mouse_genomes_project 13 113671388 113713720 - MGP_CBAJ_P0037687 Trappc13 protein_coding protein_coding MGP_CBAJ_T0037688.1 MGP_CBAJ_G0020606.1 mouse_genomes_project 13 113693957 113713772 - Trappc13 protein_coding retained_intron MGP_CBAJ_T0037689.1 MGP_CBAJ_G0020606.1 mouse_genomes_project 13 113706031 113713752 - Trappc13 protein_coding processed_transcript MGP_CBAJ_T0006458.1 MGP_CBAJ_G0005354.1 mouse_genomes_project 13 40187927 40196919 - Gm26514 lincRNA lincRNA MGP_CBAJ_T0003367.1 MGP_CBAJ_G0003092.1 mouse_genomes_project 13 24095732 24104328 + 4932702P03Rik antisense antisense MGP_CBAJ_T0003368.1 MGP_CBAJ_G0003092.1 mouse_genomes_project 13 24095735 24097464 + 4932702P03Rik antisense antisense MGP_CBAJ_T0037101.1 MGP_CBAJ_G0020414.1 mouse_genomes_project 13 72335799 72382994 - MGP_CBAJ_P0037101 protein_coding nonsense_mediated_decay MGP_CBAJ_T0011228.1 MGP_CBAJ_G0009366.1 mouse_genomes_project 13 57573256 57573517 - Gm22668 misc_RNA misc_RNA MGP_CBAJ_T0036863.1 MGP_CBAJ_G0020328.1 mouse_genomes_project 13 59940435 59943409 - MGP_CBAJ_P0036863 Il9 protein_coding protein_coding MGP_CBAJ_T0098156.1 MGP_CBAJ_G0036429.1 mouse_genomes_project 13 34153241 34153453 + Gm25043 ribozyme ribozyme MGP_CBAJ_T0036216.1 MGP_CBAJ_G0020095.1 mouse_genomes_project 13 26512853 26524339 + MGP_CBAJ_P0036216 Prl protein_coding protein_coding MGP_CBAJ_T0037694.1 MGP_CBAJ_G0020608.1 mouse_genomes_project 13 113742459 113768100 - MGP_CBAJ_P0037694 Ppwd1 protein_coding protein_coding MGP_CBAJ_T0036039.1 MGP_CBAJ_G0019994.1 mouse_genomes_project 13 20188875 20204397 - MGP_CBAJ_P0036039 Olfr1364 protein_coding protein_coding MGP_CBAJ_T0036040.1 MGP_CBAJ_G0019994.1 mouse_genomes_project 13 20188875 20189820 - MGP_CBAJ_P0036040 Olfr1364 protein_coding protein_coding MGP_CBAJ_T0003428.1 MGP_CBAJ_G0003127.1 mouse_genomes_project 13 112193325 112194982 + 1700099I09Rik antisense antisense MGP_CBAJ_T0003429.1 MGP_CBAJ_G0003127.1 mouse_genomes_project 13 112193340 112194948 + 1700099I09Rik antisense antisense MGP_CBAJ_T0036012.1 MGP_CBAJ_G0019982.1 mouse_genomes_project 13 19941618 19948615 + MGP_CBAJ_P0036012 Zscan12 protein_coding protein_coding MGP_CBAJ_T0036013.1 MGP_CBAJ_G0019982.1 mouse_genomes_project 13 19942079 19948615 + MGP_CBAJ_P0036013 Zscan12 protein_coding protein_coding MGP_CBAJ_T0036251.1 MGP_CBAJ_G0020115.1 mouse_genomes_project 13 27553616 27556552 + MGP_CBAJ_P0036251 protein_coding protein_coding MGP_CBAJ_T0009809.1 MGP_CBAJ_G0007947.1 mouse_genomes_project 13 50909885 50909982 + Gm24111 miRNA miRNA MGP_CBAJ_T0036307.1 MGP_CBAJ_G0020141.1 mouse_genomes_project 13 33468517 33488463 + MGP_CBAJ_P0036307 Serpinb9b protein_coding protein_coding MGP_CBAJ_T0037377.1 MGP_CBAJ_G0020506.1 mouse_genomes_project 13 98400805 98401171 + MGP_CBAJ_P0037377 Gm21726 protein_coding protein_coding MGP_CBAJ_T0036093.1 MGP_CBAJ_G0020033.1 mouse_genomes_project 13 21715950 21719283 - MGP_CBAJ_P0036093 Vmn1r212 protein_coding protein_coding MGP_CBAJ_T0037580.1 MGP_CBAJ_G0020580.1 mouse_genomes_project 13 108901822 108905978 - MGP_CBAJ_P0037580 Cartpt protein_coding protein_coding MGP_CBAJ_T0037775.1 MGP_CBAJ_G0020631.1 mouse_genomes_project 13 120647989 120655686 + MGP_CBAJ_P0037775 Plk2 protein_coding protein_coding MGP_CBAJ_T0037269.1 MGP_CBAJ_G0020489.1 mouse_genomes_project 13 84464991 84474646 - MGP_CBAJ_P0037269 Nr2f1 protein_coding protein_coding MGP_CBAJ_T0037270.1 MGP_CBAJ_G0020489.1 mouse_genomes_project 13 84465170 84473056 - MGP_CBAJ_P0037270 Nr2f1 protein_coding protein_coding MGP_CBAJ_T0037271.1 MGP_CBAJ_G0020489.1 mouse_genomes_project 13 84465682 84473950 - MGP_CBAJ_P0037271 Nr2f1 protein_coding protein_coding MGP_CBAJ_T0037272.1 MGP_CBAJ_G0020489.1 mouse_genomes_project 13 84465743 84472386 - MGP_CBAJ_P0037272 Nr2f1 protein_coding protein_coding MGP_CBAJ_T0037273.1 MGP_CBAJ_G0020489.1 mouse_genomes_project 13 84465882 84466454 - Nr2f1 protein_coding processed_transcript MGP_CBAJ_T0000854.1 MGP_CBAJ_G0000789.1 mouse_genomes_project 13 92423427 92423665 - TEC TEC MGP_CBAJ_T0037137.1 MGP_CBAJ_G0020433.1 mouse_genomes_project 13 73900963 73923014 - MGP_CBAJ_P0037137 Mtrr protein_coding protein_coding MGP_CBAJ_T0037832.1 MGP_CBAJ_G0020656.1 mouse_genomes_project 13 125008138 125118081 - MGP_CBAJ_P0037832 Ndufs4 protein_coding protein_coding MGP_CBAJ_T0002461.1 MGP_CBAJ_G0002370.1 mouse_genomes_project 13 17739506 17739567 + MGP_CBAJ_P0002461 Trgj4 TR_J_gene TR_J_gene MGP_CBAJ_T0100081.1 MGP_CBAJ_G0038336.1 mouse_genomes_project 13 114903001 114903131 - Gm25631 snoRNA snoRNA MGP_CBAJ_T0097942.1 MGP_CBAJ_G0036215.1 mouse_genomes_project 13 105482654 105482769 + Gm27792 rRNA rRNA MGP_CBAJ_T0003355.1 MGP_CBAJ_G0003081.1 mouse_genomes_project 13 7632154 7982331 + antisense antisense MGP_CBAJ_T0036097.1 MGP_CBAJ_G0020037.1 mouse_genomes_project 13 21946900 21947797 + MGP_CBAJ_P0036097 Vmn1r216 protein_coding protein_coding MGP_CBAJ_T0006503.1 MGP_CBAJ_G0005384.1 mouse_genomes_project 13 78325277 78326108 - Gm20554 lincRNA lincRNA MGP_CBAJ_T0006465.1 MGP_CBAJ_G0005360.1 mouse_genomes_project 13 46264723 46284864 + 1700029N11Rik lincRNA lincRNA MGP_CBAJ_T0006466.1 MGP_CBAJ_G0005360.1 mouse_genomes_project 13 46264738 46284867 + 1700029N11Rik lincRNA lincRNA MGP_CBAJ_T0037454.1 MGP_CBAJ_G0020533.1 mouse_genomes_project 13 102285392 102438699 + MGP_CBAJ_P0037454 Lhfpl2 protein_coding protein_coding MGP_CBAJ_T0037455.1 MGP_CBAJ_G0020533.1 mouse_genomes_project 13 102285428 102362391 + Lhfpl2 protein_coding retained_intron MGP_CBAJ_T0037456.1 MGP_CBAJ_G0020533.1 mouse_genomes_project 13 102313623 102418122 + MGP_CBAJ_P0037456 Lhfpl2 protein_coding protein_coding MGP_CBAJ_T0037457.1 MGP_CBAJ_G0020533.1 mouse_genomes_project 13 102376233 102417808 + MGP_CBAJ_P0037457 Lhfpl2 protein_coding protein_coding MGP_CBAJ_T0037458.1 MGP_CBAJ_G0020533.1 mouse_genomes_project 13 102416296 102437807 + MGP_CBAJ_P0037458 Lhfpl2 protein_coding protein_coding MGP_CBAJ_T0037459.1 MGP_CBAJ_G0020533.1 mouse_genomes_project 13 102417260 102417695 + Lhfpl2 protein_coding processed_transcript MGP_CBAJ_T0037460.1 MGP_CBAJ_G0020533.1 mouse_genomes_project 13 102417473 102438699 + MGP_CBAJ_P0037460 Lhfpl2 protein_coding protein_coding MGP_CBAJ_T0009838.1 MGP_CBAJ_G0007976.1 mouse_genomes_project 13 107395526 107395636 + Gm22698 miRNA miRNA MGP_CBAJ_T0037360.1 MGP_CBAJ_G0020503.1 mouse_genomes_project 13 97337720 97428718 - MGP_CBAJ_P0037360 Vcan protein_coding protein_coding MGP_CBAJ_T0037361.1 MGP_CBAJ_G0020503.1 mouse_genomes_project 13 97338747 97428531 - MGP_CBAJ_P0037361 Vcan protein_coding protein_coding MGP_CBAJ_T0037362.1 MGP_CBAJ_G0020503.1 mouse_genomes_project 13 97339052 97428543 - MGP_CBAJ_P0037362 Vcan protein_coding protein_coding MGP_CBAJ_T0037363.1 MGP_CBAJ_G0020503.1 mouse_genomes_project 13 97339424 97362081 - MGP_CBAJ_P0037363 Vcan protein_coding protein_coding MGP_CBAJ_T0037364.1 MGP_CBAJ_G0020503.1 mouse_genomes_project 13 97339463 97428453 - MGP_CBAJ_P0037364 Vcan protein_coding protein_coding MGP_CBAJ_T0037365.1 MGP_CBAJ_G0020503.1 mouse_genomes_project 13 97340062 97362868 - MGP_CBAJ_P0037365 Vcan protein_coding protein_coding MGP_CBAJ_T0037366.1 MGP_CBAJ_G0020503.1 mouse_genomes_project 13 97394615 97408188 - Vcan protein_coding retained_intron MGP_CBAJ_T0037367.1 MGP_CBAJ_G0020503.1 mouse_genomes_project 13 97395158 97428527 - MGP_CBAJ_P0037367 Vcan protein_coding protein_coding MGP_CBAJ_T0037368.1 MGP_CBAJ_G0020503.1 mouse_genomes_project 13 97411649 97426605 - MGP_CBAJ_P0037368 Vcan protein_coding protein_coding MGP_CBAJ_T0098812.1 MGP_CBAJ_G0037067.1 mouse_genomes_project 13 67256085 67256192 + Gm25448 snRNA snRNA MGP_CBAJ_T0037094.1 MGP_CBAJ_G0020409.1 mouse_genomes_project 13 72241755 72260098 - MGP_CBAJ_P0037094 Zfp458 protein_coding protein_coding MGP_CBAJ_T0000841.1 MGP_CBAJ_G0000777.1 mouse_genomes_project 13 39251153 39255077 - TEC TEC MGP_CBAJ_T0000842.1 MGP_CBAJ_G0000777.1 mouse_genomes_project 13 39254717 39255077 - TEC TEC MGP_CBAJ_T0037622.1 MGP_CBAJ_G0020591.1 mouse_genomes_project 13 109796297 109820398 + MGP_CBAJ_P0037622 protein_coding protein_coding MGP_CBAJ_T0037623.1 MGP_CBAJ_G0020591.1 mouse_genomes_project 13 109796680 109799877 + protein_coding retained_intron MGP_CBAJ_T0037624.1 MGP_CBAJ_G0020591.1 mouse_genomes_project 13 109796944 109799955 + protein_coding retained_intron MGP_CBAJ_T0036154.1 MGP_CBAJ_G0020078.1 mouse_genomes_project 13 23023020 23023421 - MGP_CBAJ_P0036154 Hist1h2ba protein_coding protein_coding MGP_CBAJ_T0036991.1 MGP_CBAJ_G0020369.1 mouse_genomes_project 13 65374061 65379741 - MGP_CBAJ_P0036991 Cts7 protein_coding protein_coding MGP_CBAJ_T0011237.1 MGP_CBAJ_G0009375.1 mouse_genomes_project 13 118536490 118536746 - Gm27572 misc_RNA misc_RNA MGP_CBAJ_T0037714.1 MGP_CBAJ_G0020618.1 mouse_genomes_project 13 116600576 116760026 - MGP_CBAJ_P0037714 Ipo11 protein_coding protein_coding MGP_CBAJ_T0037715.1 MGP_CBAJ_G0020618.1 mouse_genomes_project 13 116600576 116745232 - MGP_CBAJ_P0037715 Ipo11 protein_coding protein_coding MGP_CBAJ_T0037716.1 MGP_CBAJ_G0020618.1 mouse_genomes_project 13 116600584 116658172 - MGP_CBAJ_P0037716 Ipo11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037717.1 MGP_CBAJ_G0020618.1 mouse_genomes_project 13 116620063 116670400 - Ipo11 protein_coding retained_intron MGP_CBAJ_T0037718.1 MGP_CBAJ_G0020618.1 mouse_genomes_project 13 116620168 116647020 - Ipo11 protein_coding retained_intron MGP_CBAJ_T0037719.1 MGP_CBAJ_G0020618.1 mouse_genomes_project 13 116644412 116658007 - Ipo11 protein_coding processed_transcript MGP_CBAJ_T0037720.1 MGP_CBAJ_G0020618.1 mouse_genomes_project 13 116644414 116647008 - Ipo11 protein_coding processed_transcript MGP_CBAJ_T0037721.1 MGP_CBAJ_G0020618.1 mouse_genomes_project 13 116652828 116659208 - Ipo11 protein_coding retained_intron MGP_CBAJ_T0037722.1 MGP_CBAJ_G0020618.1 mouse_genomes_project 13 116673027 116760013 - Ipo11 protein_coding retained_intron MGP_CBAJ_T0101597.1 MGP_CBAJ_G0039628.1 mouse_genomes_project 13 21516985 21517529 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0035920.1 MGP_CBAJ_G0019946.1 mouse_genomes_project 13 11276576 11369265 + MGP_CBAJ_P0035920 Nid1 protein_coding protein_coding MGP_CBAJ_T0000853.1 MGP_CBAJ_G0000788.1 mouse_genomes_project 13 90604761 90608588 - TEC TEC MGP_CBAJ_T0036312.1 MGP_CBAJ_G0020145.1 mouse_genomes_project 13 33657469 33778267 + MGP_CBAJ_P0036312 protein_coding protein_coding MGP_CBAJ_T0101038.1 MGP_CBAJ_G0039267.1 mouse_genomes_project 13 34648748 34652832 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101039.1 MGP_CBAJ_G0039267.1 mouse_genomes_project 13 34650165 34650722 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0037620.1 MGP_CBAJ_G0020590.1 mouse_genomes_project 13 109756498 109796378 - MGP_CBAJ_P0037620 Rad17 protein_coding protein_coding MGP_CBAJ_T0037621.1 MGP_CBAJ_G0020590.1 mouse_genomes_project 13 109756498 109796378 - MGP_CBAJ_P0037621 Rad17 protein_coding protein_coding MGP_CBAJ_T0036424.1 MGP_CBAJ_G0020189.1 mouse_genomes_project 13 42131325 42148823 - MGP_CBAJ_P0036424 Tfap2a protein_coding protein_coding MGP_CBAJ_T0036425.1 MGP_CBAJ_G0020189.1 mouse_genomes_project 13 42132339 42154178 - MGP_CBAJ_P0036425 Tfap2a protein_coding protein_coding MGP_CBAJ_T0036522.1 MGP_CBAJ_G0020227.1 mouse_genomes_project 13 49158999 49161282 - MGP_CBAJ_P0036522 Nhlrc1 protein_coding protein_coding MGP_CBAJ_T0037777.1 MGP_CBAJ_G0020633.1 mouse_genomes_project 13 121822910 121897214 - MGP_CBAJ_P0037777 Gpbp1 protein_coding protein_coding MGP_CBAJ_T0037778.1 MGP_CBAJ_G0020633.1 mouse_genomes_project 13 121823162 121897131 - MGP_CBAJ_P0037778 Gpbp1 protein_coding protein_coding MGP_CBAJ_T0037779.1 MGP_CBAJ_G0020633.1 mouse_genomes_project 13 121823388 121894253 - MGP_CBAJ_P0037779 Gpbp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037780.1 MGP_CBAJ_G0020633.1 mouse_genomes_project 13 121837895 121853329 - Gpbp1 protein_coding processed_transcript MGP_CBAJ_T0037781.1 MGP_CBAJ_G0020633.1 mouse_genomes_project 13 121840496 121853288 - Gpbp1 protein_coding processed_transcript MGP_CBAJ_T0037782.1 MGP_CBAJ_G0020633.1 mouse_genomes_project 13 121840566 121853329 - Gpbp1 protein_coding retained_intron MGP_CBAJ_T0037248.1 MGP_CBAJ_G0020483.1 mouse_genomes_project 13 82225147 82324480 + MGP_CBAJ_P0037248 Ttc37 protein_coding unknown_likely_coding MGP_CBAJ_T0003391.1 MGP_CBAJ_G0003109.1 mouse_genomes_project 13 68890170 68911130 + 1810034E14Rik antisense antisense MGP_CBAJ_T0003392.1 MGP_CBAJ_G0003109.1 mouse_genomes_project 13 68890242 68909460 + 1810034E14Rik antisense antisense MGP_CBAJ_T0003393.1 MGP_CBAJ_G0003109.1 mouse_genomes_project 13 68909462 68911130 + 1810034E14Rik antisense antisense MGP_CBAJ_T0035819.1 MGP_CBAJ_G0019916.1 mouse_genomes_project 13 841815 854546 - MGP_CBAJ_P0035819 Akr1c12 protein_coding protein_coding MGP_CBAJ_T0097940.1 MGP_CBAJ_G0036213.1 mouse_genomes_project 13 48624109 48624187 + Gm24915 rRNA rRNA MGP_CBAJ_T0003395.1 MGP_CBAJ_G0003111.1 mouse_genomes_project 13 72350916 72395870 + antisense antisense MGP_CBAJ_T0036995.1 MGP_CBAJ_G0020373.1 mouse_genomes_project 13 67316562 67342670 - MGP_CBAJ_P0036995 Fbp2 protein_coding protein_coding MGP_CBAJ_T0012748.1 MGP_CBAJ_G0010860.1 mouse_genomes_project 13 31169857 31170544 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0036674.1 MGP_CBAJ_G0020277.1 mouse_genomes_project 13 57611544 57621544 - MGP_CBAJ_P0036674 Thoc3 protein_coding protein_coding MGP_CBAJ_T0036675.1 MGP_CBAJ_G0020277.1 mouse_genomes_project 13 57616381 57621483 - Thoc3 protein_coding processed_transcript MGP_CBAJ_T0036676.1 MGP_CBAJ_G0020277.1 mouse_genomes_project 13 57620504 57621521 - Thoc3 protein_coding retained_intron MGP_CBAJ_T0009831.1 MGP_CBAJ_G0007969.1 mouse_genomes_project 13 94790988 94791098 + Gm24935 miRNA miRNA MGP_CBAJ_T0036255.1 MGP_CBAJ_G0020119.1 mouse_genomes_project 13 29148774 29871076 - MGP_CBAJ_P0036255 Cdkal1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036256.1 MGP_CBAJ_G0020119.1 mouse_genomes_project 13 29302847 29871103 - MGP_CBAJ_P0036256 Cdkal1 protein_coding protein_coding MGP_CBAJ_T0036257.1 MGP_CBAJ_G0020119.1 mouse_genomes_project 13 29386244 29461250 - MGP_CBAJ_P0036257 Cdkal1 protein_coding protein_coding MGP_CBAJ_T0036258.1 MGP_CBAJ_G0020119.1 mouse_genomes_project 13 29430418 29506011 - MGP_CBAJ_P0036258 Cdkal1 protein_coding protein_coding MGP_CBAJ_T0036259.1 MGP_CBAJ_G0020119.1 mouse_genomes_project 13 29460510 29871072 - Cdkal1 protein_coding retained_intron MGP_CBAJ_T0036260.1 MGP_CBAJ_G0020119.1 mouse_genomes_project 13 29502763 29871072 - Cdkal1 protein_coding retained_intron MGP_CBAJ_T0036261.1 MGP_CBAJ_G0020119.1 mouse_genomes_project 13 29510343 29871068 - MGP_CBAJ_P0036261 Cdkal1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036262.1 MGP_CBAJ_G0020119.1 mouse_genomes_project 13 29717247 29871086 - Cdkal1 protein_coding retained_intron MGP_CBAJ_T0036263.1 MGP_CBAJ_G0020119.1 mouse_genomes_project 13 29784984 29870860 - MGP_CBAJ_P0036263 Cdkal1 protein_coding protein_coding MGP_CBAJ_T0036264.1 MGP_CBAJ_G0020119.1 mouse_genomes_project 13 29814136 29871092 - MGP_CBAJ_P0036264 Cdkal1 protein_coding protein_coding MGP_CBAJ_T0036265.1 MGP_CBAJ_G0020119.1 mouse_genomes_project 13 29848720 29871094 - MGP_CBAJ_P0036265 Cdkal1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037852.1 MGP_CBAJ_G0020663.1 mouse_genomes_project 13 127965938 128156263 - MGP_CBAJ_P0037852 Parp8 protein_coding protein_coding MGP_CBAJ_T0036554.1 MGP_CBAJ_G0020237.1 mouse_genomes_project 13 51217614 51298670 - MGP_CBAJ_P0036554 Phf2 protein_coding protein_coding MGP_CBAJ_T0012722.1 MGP_CBAJ_G0010834.1 mouse_genomes_project 13 21548516 21548943 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0035966.1 MGP_CBAJ_G0019965.1 mouse_genomes_project 13 16411871 16694467 - MGP_CBAJ_P0035966 Pou6f2 protein_coding protein_coding MGP_CBAJ_T0035967.1 MGP_CBAJ_G0019965.1 mouse_genomes_project 13 16415856 16694467 - MGP_CBAJ_P0035967 Pou6f2 protein_coding protein_coding MGP_CBAJ_T0035968.1 MGP_CBAJ_G0019965.1 mouse_genomes_project 13 16415887 16473890 - MGP_CBAJ_P0035968 Pou6f2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035969.1 MGP_CBAJ_G0019965.1 mouse_genomes_project 13 16415925 16816913 - MGP_CBAJ_P0035969 Pou6f2 protein_coding unknown_likely_coding MGP_CBAJ_T0035970.1 MGP_CBAJ_G0019965.1 mouse_genomes_project 13 16435871 16490179 - Pou6f2 protein_coding processed_transcript MGP_CBAJ_T0035971.1 MGP_CBAJ_G0019965.1 mouse_genomes_project 13 16435871 16473895 - MGP_CBAJ_P0035971 Pou6f2 protein_coding protein_coding MGP_CBAJ_T0035972.1 MGP_CBAJ_G0019965.1 mouse_genomes_project 13 16447924 16694467 - Pou6f2 protein_coding processed_transcript MGP_CBAJ_T0035803.1 MGP_CBAJ_G0019907.1 mouse_genomes_project 13 392656 393512 + MGP_CBAJ_P0035803 Calm4 protein_coding protein_coding MGP_CBAJ_T0037238.1 MGP_CBAJ_G0020478.1 mouse_genomes_project 13 81975999 82059960 - MGP_CBAJ_P0037238 Rhobtb3 protein_coding protein_coding MGP_CBAJ_T0037239.1 MGP_CBAJ_G0020478.1 mouse_genomes_project 13 81978512 81992003 - Rhobtb3 protein_coding processed_transcript MGP_CBAJ_T0037240.1 MGP_CBAJ_G0020478.1 mouse_genomes_project 13 82038789 82060018 - MGP_CBAJ_P0037240 Rhobtb3 protein_coding protein_coding MGP_CBAJ_T0012733.1 MGP_CBAJ_G0010845.1 mouse_genomes_project 13 24824972 24826088 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0037856.1 MGP_CBAJ_G0020667.1 mouse_genomes_project 13 129710670 129717813 - MGP_CBAJ_P0037856 Mrps30 protein_coding protein_coding MGP_CBAJ_T0036096.1 MGP_CBAJ_G0020036.1 mouse_genomes_project 13 21923075 21923978 + MGP_CBAJ_P0036096 Vmn1r215 protein_coding protein_coding MGP_CBAJ_T0006487.1 MGP_CBAJ_G0005372.1 mouse_genomes_project 13 58133355 58134600 + 5330429C05Rik lincRNA lincRNA MGP_CBAJ_T0036556.1 MGP_CBAJ_G0020239.1 mouse_genomes_project 13 51493069 51608936 - MGP_CBAJ_P0036556 Wnk2 protein_coding protein_coding MGP_CBAJ_T0036557.1 MGP_CBAJ_G0020239.1 mouse_genomes_project 13 51493069 51608936 - MGP_CBAJ_P0036557 Wnk2 protein_coding protein_coding MGP_CBAJ_T0036558.1 MGP_CBAJ_G0020239.1 mouse_genomes_project 13 51493069 51608934 - MGP_CBAJ_P0036558 Wnk2 protein_coding protein_coding MGP_CBAJ_T0036559.1 MGP_CBAJ_G0020239.1 mouse_genomes_project 13 51493069 51608936 - MGP_CBAJ_P0036559 Wnk2 protein_coding protein_coding MGP_CBAJ_T0036560.1 MGP_CBAJ_G0020239.1 mouse_genomes_project 13 51493075 51608154 - MGP_CBAJ_P0036560 Wnk2 protein_coding protein_coding MGP_CBAJ_T0036561.1 MGP_CBAJ_G0020239.1 mouse_genomes_project 13 51493076 51608154 - MGP_CBAJ_P0036561 Wnk2 protein_coding protein_coding MGP_CBAJ_T0036562.1 MGP_CBAJ_G0020239.1 mouse_genomes_project 13 51494375 51518827 - MGP_CBAJ_P0036562 Wnk2 protein_coding protein_coding MGP_CBAJ_T0036563.1 MGP_CBAJ_G0020239.1 mouse_genomes_project 13 51494386 51535986 - MGP_CBAJ_P0036563 Wnk2 protein_coding protein_coding MGP_CBAJ_T0036564.1 MGP_CBAJ_G0020239.1 mouse_genomes_project 13 51494747 51608936 - MGP_CBAJ_P0036564 Wnk2 protein_coding protein_coding MGP_CBAJ_T0036565.1 MGP_CBAJ_G0020239.1 mouse_genomes_project 13 51495640 51608936 - MGP_CBAJ_P0036565 Wnk2 protein_coding protein_coding MGP_CBAJ_T0036566.1 MGP_CBAJ_G0020239.1 mouse_genomes_project 13 51519272 51528946 - MGP_CBAJ_P0036566 Wnk2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0100076.1 MGP_CBAJ_G0038331.1 mouse_genomes_project 13 97835112 97835246 + Gm24507 snoRNA snoRNA MGP_CBAJ_T0036314.1 MGP_CBAJ_G0020147.1 mouse_genomes_project 13 33758009 33778263 + MGP_CBAJ_P0036314 Serpinb9e protein_coding protein_coding MGP_CBAJ_T0017102.1 MGP_CBAJ_G0014995.1 mouse_genomes_project 13 42424946 42478811 - A730081D07Rik processed_transcript processed_transcript MGP_CBAJ_T0036287.1 MGP_CBAJ_G0020133.1 mouse_genomes_project 13 32077757 32215423 - MGP_CBAJ_P0036287 Gmds protein_coding unknown_likely_coding MGP_CBAJ_T0036288.1 MGP_CBAJ_G0020133.1 mouse_genomes_project 13 32078560 32681528 - MGP_CBAJ_P0036288 Gmds protein_coding protein_coding MGP_CBAJ_T0036289.1 MGP_CBAJ_G0020133.1 mouse_genomes_project 13 32388251 32681401 - Gmds protein_coding retained_intron MGP_CBAJ_T0036290.1 MGP_CBAJ_G0020133.1 mouse_genomes_project 13 32459088 32548108 - Gmds protein_coding processed_transcript MGP_CBAJ_T0036291.1 MGP_CBAJ_G0020133.1 mouse_genomes_project 13 32546097 32681440 - MGP_CBAJ_P0036291 Gmds protein_coding nonsense_mediated_decay MGP_CBAJ_T0036340.1 MGP_CBAJ_G0020154.1 mouse_genomes_project 13 34618007 34649363 + MGP_CBAJ_P0036340 Ripk1 protein_coding protein_coding MGP_CBAJ_T0036341.1 MGP_CBAJ_G0020154.1 mouse_genomes_project 13 34618044 34630332 + Ripk1 protein_coding retained_intron MGP_CBAJ_T0036342.1 MGP_CBAJ_G0020154.1 mouse_genomes_project 13 34618518 34650856 + MGP_CBAJ_P0036342 Ripk1 protein_coding protein_coding MGP_CBAJ_T0036343.1 MGP_CBAJ_G0020154.1 mouse_genomes_project 13 34625343 34648468 + MGP_CBAJ_P0036343 Ripk1 protein_coding protein_coding MGP_CBAJ_T0006431.1 MGP_CBAJ_G0005336.1 mouse_genomes_project 13 28951405 28952678 + A330102I10Rik lincRNA lincRNA MGP_CBAJ_T0006432.1 MGP_CBAJ_G0005336.1 mouse_genomes_project 13 28951478 28965504 + A330102I10Rik lincRNA lincRNA MGP_CBAJ_T0006433.1 MGP_CBAJ_G0005336.1 mouse_genomes_project 13 28953305 28965572 + A330102I10Rik lincRNA lincRNA MGP_CBAJ_T0006434.1 MGP_CBAJ_G0005336.1 mouse_genomes_project 13 28953720 28979092 + A330102I10Rik lincRNA lincRNA MGP_CBAJ_T0006506.1 MGP_CBAJ_G0005387.1 mouse_genomes_project 13 87570861 87577590 - Gm4211 lincRNA lincRNA MGP_CBAJ_T0036618.1 MGP_CBAJ_G0020257.1 mouse_genomes_project 13 53943855 53948022 + MGP_CBAJ_P0036618 Nxnl2 protein_coding protein_coding MGP_CBAJ_T0017103.1 MGP_CBAJ_G0014996.1 mouse_genomes_project 13 63601233 63603208 + Etohd2 processed_transcript processed_transcript MGP_CBAJ_T0017104.1 MGP_CBAJ_G0014996.1 mouse_genomes_project 13 63601234 63604949 + Etohd2 processed_transcript processed_transcript MGP_CBAJ_T0037381.1 MGP_CBAJ_G0020508.1 mouse_genomes_project 13 98773042 98774862 + MGP_CBAJ_P0037381 Rps23 protein_coding protein_coding MGP_CBAJ_T0036119.1 MGP_CBAJ_G0020053.1 mouse_genomes_project 13 22583977 22585240 + MGP_CBAJ_P0036119 Hist1h1d protein_coding protein_coding MGP_CBAJ_T0037831.1 MGP_CBAJ_G0020655.1 mouse_genomes_project 13 124486314 124874588 + MGP_CBAJ_P0037831 Arl15 protein_coding protein_coding MGP_CBAJ_T0100072.1 MGP_CBAJ_G0038327.1 mouse_genomes_project 13 83905455 83905586 + Gm26088 snoRNA snoRNA MGP_CBAJ_T0037582.1 MGP_CBAJ_G0020582.1 mouse_genomes_project 13 109044672 109139388 - MGP_CBAJ_P0037582 Bdp1 protein_coding protein_coding MGP_CBAJ_T0037583.1 MGP_CBAJ_G0020582.1 mouse_genomes_project 13 109044674 109085268 - MGP_CBAJ_P0037583 Bdp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037584.1 MGP_CBAJ_G0020582.1 mouse_genomes_project 13 109049980 109139156 - MGP_CBAJ_P0037584 Bdp1 protein_coding protein_coding MGP_CBAJ_T0037585.1 MGP_CBAJ_G0020582.1 mouse_genomes_project 13 109069865 109075936 - Bdp1 protein_coding retained_intron MGP_CBAJ_T0037586.1 MGP_CBAJ_G0020582.1 mouse_genomes_project 13 109093393 109098448 - Bdp1 protein_coding retained_intron MGP_CBAJ_T0037587.1 MGP_CBAJ_G0020582.1 mouse_genomes_project 13 109110720 109133894 - MGP_CBAJ_P0037587 Bdp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037588.1 MGP_CBAJ_G0020582.1 mouse_genomes_project 13 109132855 109139195 - MGP_CBAJ_P0037588 Bdp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037091.1 MGP_CBAJ_G0020406.1 mouse_genomes_project 13 72093469 72162882 + MGP_CBAJ_P0037091 protein_coding protein_coding MGP_CBAJ_T0037394.1 MGP_CBAJ_G0020512.1 mouse_genomes_project 13 99744494 99755386 - Zcchc9 protein_coding retained_intron MGP_CBAJ_T0037395.1 MGP_CBAJ_G0020512.1 mouse_genomes_project 13 99745084 99753693 - MGP_CBAJ_P0037395 Zcchc9 protein_coding protein_coding MGP_CBAJ_T0037396.1 MGP_CBAJ_G0020512.1 mouse_genomes_project 13 99746783 99755342 - Zcchc9 protein_coding retained_intron MGP_CBAJ_T0037397.1 MGP_CBAJ_G0020512.1 mouse_genomes_project 13 99748439 99748950 - Zcchc9 protein_coding retained_intron MGP_CBAJ_T0037424.1 MGP_CBAJ_G0020520.1 mouse_genomes_project 13 100494572 100548313 - MGP_CBAJ_P0037424 Zfyve16 protein_coding protein_coding MGP_CBAJ_T0037425.1 MGP_CBAJ_G0020520.1 mouse_genomes_project 13 100495398 100532375 - Zfyve16 protein_coding retained_intron MGP_CBAJ_T0037426.1 MGP_CBAJ_G0020520.1 mouse_genomes_project 13 100521192 100522626 - Zfyve16 protein_coding retained_intron MGP_CBAJ_T0037427.1 MGP_CBAJ_G0020520.1 mouse_genomes_project 13 100529087 100538033 - Zfyve16 protein_coding processed_transcript MGP_CBAJ_T0006524.1 MGP_CBAJ_G0005399.1 mouse_genomes_project 13 106123840 106194512 + Lncenc1 lincRNA lincRNA MGP_CBAJ_T0006525.1 MGP_CBAJ_G0005399.1 mouse_genomes_project 13 106180189 106194512 + Lncenc1 lincRNA lincRNA MGP_CBAJ_T0006526.1 MGP_CBAJ_G0005399.1 mouse_genomes_project 13 106180439 106187195 + Lncenc1 lincRNA lincRNA MGP_CBAJ_T0000865.1 MGP_CBAJ_G0000800.1 mouse_genomes_project 13 111072692 111073092 - TEC TEC MGP_CBAJ_T0035823.1 MGP_CBAJ_G0019918.1 mouse_genomes_project 13 1069666 1109798 - MGP_CBAJ_P0035823 Akr1c20 protein_coding protein_coding MGP_CBAJ_T0035824.1 MGP_CBAJ_G0019918.1 mouse_genomes_project 13 1090119 1109813 - MGP_CBAJ_P0035824 Akr1c20 protein_coding protein_coding MGP_CBAJ_T0009840.1 MGP_CBAJ_G0007978.1 mouse_genomes_project 13 119459215 119459296 + Mir582 miRNA miRNA MGP_CBAJ_T0037174.1 MGP_CBAJ_G0020451.1 mouse_genomes_project 13 79230929 79282449 + MGP_CBAJ_P0037174 Lpcat1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037175.1 MGP_CBAJ_G0020451.1 mouse_genomes_project 13 79230929 79282449 + MGP_CBAJ_P0037175 Lpcat1 protein_coding protein_coding MGP_CBAJ_T0037176.1 MGP_CBAJ_G0020451.1 mouse_genomes_project 13 79230963 79281139 + MGP_CBAJ_P0037176 Lpcat1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037177.1 MGP_CBAJ_G0020451.1 mouse_genomes_project 13 79231155 79265194 + Lpcat1 protein_coding retained_intron MGP_CBAJ_T0037178.1 MGP_CBAJ_G0020451.1 mouse_genomes_project 13 79266596 79279868 + Lpcat1 protein_coding retained_intron MGP_CBAJ_T0037179.1 MGP_CBAJ_G0020451.1 mouse_genomes_project 13 79274663 79275321 + Lpcat1 protein_coding retained_intron MGP_CBAJ_T0035814.1 MGP_CBAJ_G0019914.1 mouse_genomes_project 13 760200 767835 + MGP_CBAJ_P0035814 Akr1c13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0035815.1 MGP_CBAJ_G0019914.1 mouse_genomes_project 13 760203 778450 + MGP_CBAJ_P0035815 Akr1c13 protein_coding protein_coding MGP_CBAJ_T0036971.1 MGP_CBAJ_G0020353.1 mouse_genomes_project 13 63603147 63658531 - MGP_CBAJ_P0036971 Zcchc6 protein_coding protein_coding MGP_CBAJ_T0036972.1 MGP_CBAJ_G0020353.1 mouse_genomes_project 13 63604060 63657463 - MGP_CBAJ_P0036972 Zcchc6 protein_coding unknown_likely_coding MGP_CBAJ_T0036134.1 MGP_CBAJ_G0020064.1 mouse_genomes_project 13 22813425 22816202 + MGP_CBAJ_P0036134 Hist1h1c protein_coding protein_coding MGP_CBAJ_T0097938.1 MGP_CBAJ_G0036211.1 mouse_genomes_project 13 12033243 12033356 - n-R5s52 rRNA rRNA MGP_CBAJ_T0098802.1 MGP_CBAJ_G0037057.1 mouse_genomes_project 13 41185899 41186064 - Gm23972 snRNA snRNA MGP_CBAJ_T0006426.1 MGP_CBAJ_G0005332.1 mouse_genomes_project 13 25248772 25262462 - Gm11351 lincRNA lincRNA MGP_CBAJ_T0006470.1 MGP_CBAJ_G0005363.1 mouse_genomes_project 13 50351266 50601768 - A330033J07Rik lincRNA lincRNA MGP_CBAJ_T0006471.1 MGP_CBAJ_G0005363.1 mouse_genomes_project 13 50578209 50601227 - A330033J07Rik lincRNA lincRNA MGP_CBAJ_T0098799.1 MGP_CBAJ_G0037054.1 mouse_genomes_project 13 31988662 31988770 - Gm25186 snRNA snRNA MGP_CBAJ_T0100059.1 MGP_CBAJ_G0038314.1 mouse_genomes_project 13 52207968 52208101 + Gm25394 snoRNA snoRNA MGP_CBAJ_T0036947.1 MGP_CBAJ_G0020347.1 mouse_genomes_project 13 63395136 63409662 + MGP_CBAJ_P0036947 Naa35 protein_coding protein_coding MGP_CBAJ_T0036948.1 MGP_CBAJ_G0020347.1 mouse_genomes_project 13 63395172 63444366 + MGP_CBAJ_P0036948 Naa35 protein_coding protein_coding MGP_CBAJ_T0036949.1 MGP_CBAJ_G0020347.1 mouse_genomes_project 13 63395271 63418683 + MGP_CBAJ_P0036949 Naa35 protein_coding protein_coding MGP_CBAJ_T0036950.1 MGP_CBAJ_G0020347.1 mouse_genomes_project 13 63396047 63434085 + MGP_CBAJ_P0036950 Naa35 protein_coding protein_coding MGP_CBAJ_T0036951.1 MGP_CBAJ_G0020347.1 mouse_genomes_project 13 63405230 63410135 + Naa35 protein_coding retained_intron MGP_CBAJ_T0036952.1 MGP_CBAJ_G0020347.1 mouse_genomes_project 13 63407987 63427588 + MGP_CBAJ_P0036952 Naa35 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036953.1 MGP_CBAJ_G0020347.1 mouse_genomes_project 13 63419128 63437201 + Naa35 protein_coding retained_intron MGP_CBAJ_T0036954.1 MGP_CBAJ_G0020347.1 mouse_genomes_project 13 63419253 63435016 + Naa35 protein_coding retained_intron MGP_CBAJ_T0036955.1 MGP_CBAJ_G0020347.1 mouse_genomes_project 13 63419288 63435042 + Naa35 protein_coding retained_intron MGP_CBAJ_T0036956.1 MGP_CBAJ_G0020347.1 mouse_genomes_project 13 63419373 63434157 + MGP_CBAJ_P0036956 Naa35 protein_coding protein_coding MGP_CBAJ_T0036957.1 MGP_CBAJ_G0020347.1 mouse_genomes_project 13 63427554 63444320 + Naa35 protein_coding processed_transcript MGP_CBAJ_T0036958.1 MGP_CBAJ_G0020347.1 mouse_genomes_project 13 63427604 63435232 + Naa35 protein_coding retained_intron MGP_CBAJ_T0036959.1 MGP_CBAJ_G0020347.1 mouse_genomes_project 13 63427605 63437523 + MGP_CBAJ_P0036959 Naa35 protein_coding protein_coding MGP_CBAJ_T0036960.1 MGP_CBAJ_G0020347.1 mouse_genomes_project 13 63434011 63438515 + Naa35 protein_coding retained_intron MGP_CBAJ_T0036961.1 MGP_CBAJ_G0020347.1 mouse_genomes_project 13 63442292 63444207 + Naa35 protein_coding retained_intron MGP_CBAJ_T0012800.1 MGP_CBAJ_G0010912.1 mouse_genomes_project 13 123742208 123742467 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0036148.1 MGP_CBAJ_G0020075.1 mouse_genomes_project 13 22927001 22942677 + MGP_CBAJ_P0036148 Slc17a3 protein_coding protein_coding MGP_CBAJ_T0036442.1 MGP_CBAJ_G0020196.1 mouse_genomes_project 13 42677295 42721677 - MGP_CBAJ_P0036442 Elovl2 protein_coding protein_coding MGP_CBAJ_T0036443.1 MGP_CBAJ_G0020196.1 mouse_genomes_project 13 42677299 42721434 - MGP_CBAJ_P0036443 Elovl2 protein_coding protein_coding MGP_CBAJ_T0036482.1 MGP_CBAJ_G0020214.1 mouse_genomes_project 13 46608745 46613862 + Jarid2 protein_coding processed_transcript MGP_CBAJ_T0036483.1 MGP_CBAJ_G0020214.1 mouse_genomes_project 13 46608806 46749003 + MGP_CBAJ_P0036483 Jarid2 protein_coding protein_coding MGP_CBAJ_T0036484.1 MGP_CBAJ_G0020214.1 mouse_genomes_project 13 46609066 46721509 + MGP_CBAJ_P0036484 Jarid2 protein_coding protein_coding MGP_CBAJ_T0036485.1 MGP_CBAJ_G0020214.1 mouse_genomes_project 13 46610045 46832322 + MGP_CBAJ_P0036485 Jarid2 protein_coding protein_coding MGP_CBAJ_T0036486.1 MGP_CBAJ_G0020214.1 mouse_genomes_project 13 46610094 46833210 + MGP_CBAJ_P0036486 Jarid2 protein_coding protein_coding MGP_CBAJ_T0036487.1 MGP_CBAJ_G0020214.1 mouse_genomes_project 13 46610109 46815477 + MGP_CBAJ_P0036487 Jarid2 protein_coding protein_coding MGP_CBAJ_T0036488.1 MGP_CBAJ_G0020214.1 mouse_genomes_project 13 46610130 46783009 + Jarid2 protein_coding processed_transcript MGP_CBAJ_T0036489.1 MGP_CBAJ_G0020214.1 mouse_genomes_project 13 46613559 46833858 + MGP_CBAJ_P0036489 Jarid2 protein_coding protein_coding MGP_CBAJ_T0036490.1 MGP_CBAJ_G0020214.1 mouse_genomes_project 13 46613575 46721402 + MGP_CBAJ_P0036490 Jarid2 protein_coding protein_coding MGP_CBAJ_T0036491.1 MGP_CBAJ_G0020214.1 mouse_genomes_project 13 46613656 46795572 + Jarid2 protein_coding retained_intron MGP_CBAJ_T0036492.1 MGP_CBAJ_G0020214.1 mouse_genomes_project 13 46613658 46833855 + Jarid2 protein_coding retained_intron MGP_CBAJ_T0036493.1 MGP_CBAJ_G0020214.1 mouse_genomes_project 13 46613885 46795292 + MGP_CBAJ_P0036493 Jarid2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036494.1 MGP_CBAJ_G0020214.1 mouse_genomes_project 13 46614146 46783000 + Jarid2 protein_coding processed_transcript MGP_CBAJ_T0036495.1 MGP_CBAJ_G0020214.1 mouse_genomes_project 13 46618626 46782972 + Jarid2 protein_coding processed_transcript MGP_CBAJ_T0036496.1 MGP_CBAJ_G0020214.1 mouse_genomes_project 13 46741397 46826533 + MGP_CBAJ_P0036496 Jarid2 protein_coding protein_coding MGP_CBAJ_T0036497.1 MGP_CBAJ_G0020214.1 mouse_genomes_project 13 46741489 46808700 + MGP_CBAJ_P0036497 Jarid2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0098798.1 MGP_CBAJ_G0037053.1 mouse_genomes_project 13 30230055 30230239 - Gm23206 snRNA snRNA MGP_CBAJ_T0035922.1 MGP_CBAJ_G0019948.1 mouse_genomes_project 13 11470035 11663836 + MGP_CBAJ_P0035922 Lyst protein_coding protein_coding MGP_CBAJ_T0011217.1 MGP_CBAJ_G0009355.1 mouse_genomes_project 13 6231818 6232113 + Gm23553 misc_RNA misc_RNA MGP_CBAJ_T0006420.1 MGP_CBAJ_G0005327.1 mouse_genomes_project 13 22224979 22232379 + lincRNA lincRNA MGP_CBAJ_T0037776.1 MGP_CBAJ_G0020632.1 mouse_genomes_project 13 121600780 121603517 + MGP_CBAJ_P0037776 Actbl2 protein_coding protein_coding MGP_CBAJ_T0037423.1 MGP_CBAJ_G0020519.1 mouse_genomes_project 13 100448701 100491496 - MGP_CBAJ_P0037423 Fam151b protein_coding protein_coding MGP_CBAJ_T0098819.1 MGP_CBAJ_G0037074.1 mouse_genomes_project 13 109743572 109743676 + Gm24261 snRNA snRNA MGP_CBAJ_T0036129.1 MGP_CBAJ_G0020061.1 mouse_genomes_project 13 22764124 22764522 - MGP_CBAJ_P0036129 Hist1h4c protein_coding protein_coding MGP_CBAJ_T0100053.1 MGP_CBAJ_G0038308.1 mouse_genomes_project 13 36074865 36074996 - Gm22674 snoRNA snoRNA MGP_CBAJ_T0006453.1 MGP_CBAJ_G0005350.1 mouse_genomes_project 13 38434671 38437118 - Gm4035 lincRNA lincRNA MGP_CBAJ_T0006454.1 MGP_CBAJ_G0005350.1 mouse_genomes_project 13 38434783 38451467 - Gm4035 lincRNA lincRNA MGP_CBAJ_T0006513.1 MGP_CBAJ_G0005391.1 mouse_genomes_project 13 90591745 90597830 - Gm26803 lincRNA lincRNA MGP_CBAJ_T0036672.1 MGP_CBAJ_G0020275.1 mouse_genomes_project 13 57296723 57332766 + MGP_CBAJ_P0036672 Hrh2 protein_coding protein_coding MGP_CBAJ_T0098814.1 MGP_CBAJ_G0037069.1 mouse_genomes_project 13 86708824 86708952 + Gm24635 snRNA snRNA MGP_CBAJ_T0037095.1 MGP_CBAJ_G0020410.1 mouse_genomes_project 13 72276162 72290056 - MGP_CBAJ_P0037095 Zfp457 protein_coding protein_coding MGP_CBAJ_T0037096.1 MGP_CBAJ_G0020410.1 mouse_genomes_project 13 72289329 72290111 - Zfp457 protein_coding retained_intron MGP_CBAJ_T0036846.1 MGP_CBAJ_G0020320.1 mouse_genomes_project 13 59145298 59176337 + MGP_CBAJ_P0036846 Catsper3 protein_coding protein_coding MGP_CBAJ_T0036847.1 MGP_CBAJ_G0020320.1 mouse_genomes_project 13 59145309 59176368 + MGP_CBAJ_P0036847 Catsper3 protein_coding protein_coding MGP_CBAJ_T0097944.1 MGP_CBAJ_G0036217.1 mouse_genomes_project 13 124046128 124046229 + Gm22385 rRNA rRNA MGP_CBAJ_T0006451.1 MGP_CBAJ_G0005349.1 mouse_genomes_project 13 35715691 35737245 + lincRNA lincRNA MGP_CBAJ_T0006452.1 MGP_CBAJ_G0005349.1 mouse_genomes_project 13 35715744 35752891 + lincRNA lincRNA MGP_CBAJ_T0100047.1 MGP_CBAJ_G0038302.1 mouse_genomes_project 13 17297625 17297759 + Gm26172 snoRNA snoRNA MGP_CBAJ_T0035905.1 MGP_CBAJ_G0019938.1 mouse_genomes_project 13 9598219 9678762 - MGP_CBAJ_P0035905 Mtr protein_coding protein_coding MGP_CBAJ_T0037674.1 MGP_CBAJ_G0020603.1 mouse_genomes_project 13 113349608 113452984 - MGP_CBAJ_P0037674 Erbin protein_coding protein_coding MGP_CBAJ_T0037675.1 MGP_CBAJ_G0020603.1 mouse_genomes_project 13 113349612 113427142 - MGP_CBAJ_P0037675 Erbin protein_coding protein_coding MGP_CBAJ_T0037676.1 MGP_CBAJ_G0020603.1 mouse_genomes_project 13 113349612 113452765 - MGP_CBAJ_P0037676 Erbin protein_coding protein_coding MGP_CBAJ_T0037677.1 MGP_CBAJ_G0020603.1 mouse_genomes_project 13 113350428 113452765 - MGP_CBAJ_P0037677 Erbin protein_coding protein_coding MGP_CBAJ_T0037678.1 MGP_CBAJ_G0020603.1 mouse_genomes_project 13 113350428 113452765 - MGP_CBAJ_P0037678 Erbin protein_coding protein_coding MGP_CBAJ_T0037679.1 MGP_CBAJ_G0020603.1 mouse_genomes_project 13 113350428 113452765 - MGP_CBAJ_P0037679 Erbin protein_coding protein_coding MGP_CBAJ_T0037680.1 MGP_CBAJ_G0020603.1 mouse_genomes_project 13 113373695 113452984 - Erbin protein_coding retained_intron MGP_CBAJ_T0037697.1 MGP_CBAJ_G0020610.1 mouse_genomes_project 13 113834079 114066672 + MGP_CBAJ_P0037697 Adamts6 protein_coding protein_coding MGP_CBAJ_T0037373.1 MGP_CBAJ_G0020505.1 mouse_genomes_project 13 97825260 97849427 + MGP_CBAJ_P0037373 Tmem167 protein_coding protein_coding MGP_CBAJ_T0037374.1 MGP_CBAJ_G0020505.1 mouse_genomes_project 13 97825872 97884360 + MGP_CBAJ_P0037374 Tmem167 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037375.1 MGP_CBAJ_G0020505.1 mouse_genomes_project 13 97825900 97841830 + MGP_CBAJ_P0037375 Tmem167 protein_coding protein_coding MGP_CBAJ_T0037376.1 MGP_CBAJ_G0020505.1 mouse_genomes_project 13 97825919 97840573 + MGP_CBAJ_P0037376 Tmem167 protein_coding unknown_likely_coding MGP_CBAJ_T0098805.1 MGP_CBAJ_G0037060.1 mouse_genomes_project 13 45150649 45150758 - Gm26064 snRNA snRNA MGP_CBAJ_T0037882.1 MGP_CBAJ_G0020678.1 mouse_genomes_project 13 131078919 131130768 - MGP_CBAJ_P0037882 Nim1k protein_coding protein_coding MGP_CBAJ_T0037883.1 MGP_CBAJ_G0020678.1 mouse_genomes_project 13 131095271 131111869 - MGP_CBAJ_P0037883 Nim1k protein_coding protein_coding MGP_CBAJ_T0037092.1 MGP_CBAJ_G0020407.1 mouse_genomes_project 13 72144209 72161903 + MGP_CBAJ_P0037092 protein_coding protein_coding MGP_CBAJ_T0037103.1 MGP_CBAJ_G0020416.1 mouse_genomes_project 13 72451377 72480420 - MGP_CBAJ_P0037103 protein_coding protein_coding MGP_CBAJ_T0037589.1 MGP_CBAJ_G0020583.1 mouse_genomes_project 13 109143217 109149188 + MGP_CBAJ_P0037589 Serf1 protein_coding protein_coding MGP_CBAJ_T0037590.1 MGP_CBAJ_G0020583.1 mouse_genomes_project 13 109143290 109146041 + MGP_CBAJ_P0037590 Serf1 protein_coding protein_coding MGP_CBAJ_T0037591.1 MGP_CBAJ_G0020583.1 mouse_genomes_project 13 109143360 109149521 + MGP_CBAJ_P0037591 Serf1 protein_coding protein_coding MGP_CBAJ_T0037592.1 MGP_CBAJ_G0020583.1 mouse_genomes_project 13 109143545 109149188 + MGP_CBAJ_P0037592 Serf1 protein_coding protein_coding MGP_CBAJ_T0037593.1 MGP_CBAJ_G0020583.1 mouse_genomes_project 13 109143600 109149181 + MGP_CBAJ_P0037593 Serf1 protein_coding protein_coding MGP_CBAJ_T0036376.1 MGP_CBAJ_G0020169.1 mouse_genomes_project 13 36740296 36753188 - MGP_CBAJ_P0036376 Rpp40 protein_coding protein_coding MGP_CBAJ_T0036377.1 MGP_CBAJ_G0020169.1 mouse_genomes_project 13 36743531 36745696 - MGP_CBAJ_P0036377 Rpp40 protein_coding protein_coding MGP_CBAJ_T0036378.1 MGP_CBAJ_G0020169.1 mouse_genomes_project 13 36743539 36753157 - Rpp40 protein_coding retained_intron MGP_CBAJ_T0036379.1 MGP_CBAJ_G0020169.1 mouse_genomes_project 13 36743542 36753173 - MGP_CBAJ_P0036379 Rpp40 protein_coding protein_coding MGP_CBAJ_T0037723.1 MGP_CBAJ_G0020619.1 mouse_genomes_project 13 116774524 116785040 + MGP_CBAJ_P0037723 protein_coding unknown_likely_coding MGP_CBAJ_T0037090.1 MGP_CBAJ_G0020405.1 mouse_genomes_project 13 72052904 72066849 + MGP_CBAJ_P0037090 Zfp759 protein_coding protein_coding MGP_CBAJ_T0101040.1 MGP_CBAJ_G0039268.1 mouse_genomes_project 13 112628810 112633086 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0009846.1 MGP_CBAJ_G0007984.1 mouse_genomes_project 13 130669164 130669280 - Gm44488 miRNA miRNA MGP_CBAJ_T0037063.1 MGP_CBAJ_G0020397.1 mouse_genomes_project 13 70042249 70074768 + MGP_CBAJ_P0037063 Zfp369 protein_coding protein_coding MGP_CBAJ_T0037064.1 MGP_CBAJ_G0020397.1 mouse_genomes_project 13 70042249 70061210 + MGP_CBAJ_P0037064 Zfp369 protein_coding protein_coding MGP_CBAJ_T0037065.1 MGP_CBAJ_G0020397.1 mouse_genomes_project 13 70042287 70050917 + Zfp369 protein_coding retained_intron MGP_CBAJ_T0037066.1 MGP_CBAJ_G0020397.1 mouse_genomes_project 13 70042338 70048401 + MGP_CBAJ_P0037066 Zfp369 protein_coding protein_coding MGP_CBAJ_T0012727.1 MGP_CBAJ_G0010839.1 mouse_genomes_project 13 23292575 23293174 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0036123.1 MGP_CBAJ_G0020057.1 mouse_genomes_project 13 22623037 22671823 - MGP_CBAJ_P0036123 Hist1h2be protein_coding protein_coding MGP_CBAJ_T0036124.1 MGP_CBAJ_G0020057.1 mouse_genomes_project 13 22623038 22671853 - MGP_CBAJ_P0036124 Hist1h2be protein_coding protein_coding MGP_CBAJ_T0036125.1 MGP_CBAJ_G0020057.1 mouse_genomes_project 13 22669708 22671807 - Hist1h2be protein_coding processed_transcript MGP_CBAJ_T0036988.1 MGP_CBAJ_G0020366.1 mouse_genomes_project 13 65137464 65144935 - MGP_CBAJ_P0036988 Ctsr protein_coding protein_coding MGP_CBAJ_T0009821.1 MGP_CBAJ_G0007959.1 mouse_genomes_project 13 64188175 64188276 + Gm24999 miRNA miRNA MGP_CBAJ_T0006423.1 MGP_CBAJ_G0005329.1 mouse_genomes_project 13 23442426 23443500 - Gm11342 lincRNA lincRNA MGP_CBAJ_T0009802.1 MGP_CBAJ_G0007940.1 mouse_genomes_project 13 22827484 22827622 - Gm44484 miRNA miRNA MGP_CBAJ_T0036774.1 MGP_CBAJ_G0020294.1 mouse_genomes_project 13 58350666 58383636 + MGP_CBAJ_P0036774 Zfp346 protein_coding protein_coding MGP_CBAJ_T0036775.1 MGP_CBAJ_G0020294.1 mouse_genomes_project 13 58350669 58367742 + MGP_CBAJ_P0036775 Zfp346 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036776.1 MGP_CBAJ_G0020294.1 mouse_genomes_project 13 58350672 58380971 + MGP_CBAJ_P0036776 Zfp346 protein_coding protein_coding MGP_CBAJ_T0036777.1 MGP_CBAJ_G0020294.1 mouse_genomes_project 13 58350690 58381289 + MGP_CBAJ_P0036777 Zfp346 protein_coding protein_coding MGP_CBAJ_T0036778.1 MGP_CBAJ_G0020294.1 mouse_genomes_project 13 58350691 58381339 + MGP_CBAJ_P0036778 Zfp346 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036779.1 MGP_CBAJ_G0020294.1 mouse_genomes_project 13 58350691 58379184 + MGP_CBAJ_P0036779 Zfp346 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036780.1 MGP_CBAJ_G0020294.1 mouse_genomes_project 13 58350695 58381080 + MGP_CBAJ_P0036780 Zfp346 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036781.1 MGP_CBAJ_G0020294.1 mouse_genomes_project 13 58350697 58381172 + MGP_CBAJ_P0036781 Zfp346 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036782.1 MGP_CBAJ_G0020294.1 mouse_genomes_project 13 58350757 58380959 + MGP_CBAJ_P0036782 Zfp346 protein_coding protein_coding MGP_CBAJ_T0036783.1 MGP_CBAJ_G0020294.1 mouse_genomes_project 13 58358386 58359269 + Zfp346 protein_coding retained_intron MGP_CBAJ_T0036784.1 MGP_CBAJ_G0020294.1 mouse_genomes_project 13 58367279 58380940 + Zfp346 protein_coding retained_intron MGP_CBAJ_T0036785.1 MGP_CBAJ_G0020294.1 mouse_genomes_project 13 58378807 58381214 + Zfp346 protein_coding retained_intron MGP_CBAJ_T0037887.1 MGP_CBAJ_G0020681.1 mouse_genomes_project 13 131218431 131219159 - MGP_CBAJ_P0037887 protein_coding protein_coding MGP_CBAJ_T0012791.1 MGP_CBAJ_G0010903.1 mouse_genomes_project 13 110229026 110229994 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0036014.1 MGP_CBAJ_G0019983.1 mouse_genomes_project 13 19968189 19990520 - MGP_CBAJ_P0036014 Zkscan3 protein_coding protein_coding MGP_CBAJ_T0036015.1 MGP_CBAJ_G0019983.1 mouse_genomes_project 13 19968189 19990562 - MGP_CBAJ_P0036015 Zkscan3 protein_coding protein_coding MGP_CBAJ_T0036016.1 MGP_CBAJ_G0019983.1 mouse_genomes_project 13 19974410 19981220 - MGP_CBAJ_P0036016 Zkscan3 protein_coding protein_coding MGP_CBAJ_T0036017.1 MGP_CBAJ_G0019983.1 mouse_genomes_project 13 19975096 19990502 - MGP_CBAJ_P0036017 Zkscan3 protein_coding protein_coding MGP_CBAJ_T0036018.1 MGP_CBAJ_G0019983.1 mouse_genomes_project 13 19979688 19990523 - MGP_CBAJ_P0036018 Zkscan3 protein_coding protein_coding MGP_CBAJ_T0036019.1 MGP_CBAJ_G0019983.1 mouse_genomes_project 13 19980398 19982724 - MGP_CBAJ_P0036019 Zkscan3 protein_coding unknown_likely_coding MGP_CBAJ_T0036020.1 MGP_CBAJ_G0019983.1 mouse_genomes_project 13 19989360 19990477 - Zkscan3 protein_coding processed_transcript MGP_CBAJ_T0009816.1 MGP_CBAJ_G0007954.1 mouse_genomes_project 13 58796369 58796465 - Mir6944 miRNA miRNA MGP_CBAJ_T0036422.1 MGP_CBAJ_G0020187.1 mouse_genomes_project 13 41335996 41641679 - MGP_CBAJ_P0036422 Ofcc1 protein_coding protein_coding MGP_CBAJ_T0100063.1 MGP_CBAJ_G0038318.1 mouse_genomes_project 13 60425703 60425832 - Gm22777 snoRNA snoRNA MGP_CBAJ_T0100054.1 MGP_CBAJ_G0038309.1 mouse_genomes_project 13 37599450 37599582 + Gm26395 snoRNA snoRNA MGP_CBAJ_T0037399.1 MGP_CBAJ_G0020514.1 mouse_genomes_project 13 99832302 100091630 - MGP_CBAJ_P0037399 Rasgrf2 protein_coding protein_coding MGP_CBAJ_T0037400.1 MGP_CBAJ_G0020514.1 mouse_genomes_project 13 99836332 100091630 - MGP_CBAJ_P0037400 Rasgrf2 protein_coding protein_coding MGP_CBAJ_T0037401.1 MGP_CBAJ_G0020514.1 mouse_genomes_project 13 99915736 99947511 - MGP_CBAJ_P0037401 Rasgrf2 protein_coding protein_coding MGP_CBAJ_T0037402.1 MGP_CBAJ_G0020514.1 mouse_genomes_project 13 99981165 100091792 - MGP_CBAJ_P0037402 Rasgrf2 protein_coding protein_coding MGP_CBAJ_T0037403.1 MGP_CBAJ_G0020514.1 mouse_genomes_project 13 99981165 99983570 - MGP_CBAJ_P0037403 Rasgrf2 protein_coding protein_coding MGP_CBAJ_T0101627.1 MGP_CBAJ_G0039658.1 mouse_genomes_project 13 34407120 34408044 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0036983.1 MGP_CBAJ_G0020362.1 mouse_genomes_project 13 64868623 64871094 - MGP_CBAJ_P0036983 Ctla2a protein_coding protein_coding MGP_CBAJ_T0037747.1 MGP_CBAJ_G0020627.1 mouse_genomes_project 13 118351095 118430535 + MGP_CBAJ_P0037747 Depdc1b protein_coding protein_coding MGP_CBAJ_T0037748.1 MGP_CBAJ_G0020627.1 mouse_genomes_project 13 118351131 118359284 + Depdc1b protein_coding retained_intron MGP_CBAJ_T0037749.1 MGP_CBAJ_G0020627.1 mouse_genomes_project 13 118351143 118442339 + MGP_CBAJ_P0037749 Depdc1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0037750.1 MGP_CBAJ_G0020627.1 mouse_genomes_project 13 118351185 118429662 + MGP_CBAJ_P0037750 Depdc1b protein_coding protein_coding MGP_CBAJ_T0037751.1 MGP_CBAJ_G0020627.1 mouse_genomes_project 13 118361343 118405349 + Depdc1b protein_coding processed_transcript MGP_CBAJ_T0037752.1 MGP_CBAJ_G0020627.1 mouse_genomes_project 13 118393319 118410417 + Depdc1b protein_coding retained_intron MGP_CBAJ_T0036384.1 MGP_CBAJ_G0020173.1 mouse_genomes_project 13 37679930 37693750 - MGP_CBAJ_P0036384 Nrn1 protein_coding protein_coding MGP_CBAJ_T0036385.1 MGP_CBAJ_G0020173.1 mouse_genomes_project 13 37680763 37687798 - MGP_CBAJ_P0036385 Nrn1 protein_coding protein_coding MGP_CBAJ_T0036670.1 MGP_CBAJ_G0020273.1 mouse_genomes_project 13 57144603 57149061 - MGP_CBAJ_P0036670 Drd1 protein_coding protein_coding MGP_CBAJ_T0036380.1 MGP_CBAJ_G0020170.1 mouse_genomes_project 13 36819954 36836899 + Ppp1r3g protein_coding processed_transcript MGP_CBAJ_T0036381.1 MGP_CBAJ_G0020170.1 mouse_genomes_project 13 36836427 36838963 + MGP_CBAJ_P0036381 Ppp1r3g protein_coding protein_coding MGP_CBAJ_T0036895.1 MGP_CBAJ_G0020338.1 mouse_genomes_project 13 61829658 61869007 - MGP_CBAJ_P0036895 Ubqln1 protein_coding protein_coding MGP_CBAJ_T0036896.1 MGP_CBAJ_G0020338.1 mouse_genomes_project 13 61829658 61869007 - MGP_CBAJ_P0036896 Ubqln1 protein_coding protein_coding MGP_CBAJ_T0036804.1 MGP_CBAJ_G0020306.1 mouse_genomes_project 13 58756173 58770721 + MGP_CBAJ_P0036804 Grk6 protein_coding protein_coding MGP_CBAJ_T0036805.1 MGP_CBAJ_G0020306.1 mouse_genomes_project 13 58756173 58771981 + MGP_CBAJ_P0036805 Grk6 protein_coding protein_coding MGP_CBAJ_T0036806.1 MGP_CBAJ_G0020306.1 mouse_genomes_project 13 58756309 58770981 + MGP_CBAJ_P0036806 Grk6 protein_coding unknown_likely_coding MGP_CBAJ_T0035830.1 MGP_CBAJ_G0019921.1 mouse_genomes_project 13 1403028 1477028 + MGP_CBAJ_P0035830 Gm5444 protein_coding protein_coding MGP_CBAJ_T0006439.1 MGP_CBAJ_G0005341.1 mouse_genomes_project 13 31525598 31526774 - Gm11373 lincRNA lincRNA MGP_CBAJ_T0101606.1 MGP_CBAJ_G0039637.1 mouse_genomes_project 13 21838354 21838591 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0037594.1 MGP_CBAJ_G0020584.1 mouse_genomes_project 13 109160018 109172844 + MGP_CBAJ_P0037594 Smn1 protein_coding protein_coding MGP_CBAJ_T0037595.1 MGP_CBAJ_G0020584.1 mouse_genomes_project 13 109160024 109162309 + Smn1 protein_coding retained_intron MGP_CBAJ_T0037596.1 MGP_CBAJ_G0020584.1 mouse_genomes_project 13 109160024 109162975 + MGP_CBAJ_P0037596 Smn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037597.1 MGP_CBAJ_G0020584.1 mouse_genomes_project 13 109160060 109172634 + MGP_CBAJ_P0037597 Smn1 protein_coding protein_coding MGP_CBAJ_T0037598.1 MGP_CBAJ_G0020584.1 mouse_genomes_project 13 109160090 109166329 + MGP_CBAJ_P0037598 Smn1 protein_coding protein_coding MGP_CBAJ_T0037599.1 MGP_CBAJ_G0020584.1 mouse_genomes_project 13 109161291 109162102 + Smn1 protein_coding retained_intron MGP_CBAJ_T0037600.1 MGP_CBAJ_G0020584.1 mouse_genomes_project 13 109163037 109163793 + Smn1 protein_coding retained_intron MGP_CBAJ_T0037601.1 MGP_CBAJ_G0020584.1 mouse_genomes_project 13 109166157 109172844 + Smn1 protein_coding retained_intron MGP_CBAJ_T0037602.1 MGP_CBAJ_G0020584.1 mouse_genomes_project 13 109170547 109172604 + Smn1 protein_coding retained_intron MGP_CBAJ_T0037142.1 MGP_CBAJ_G0020437.1 mouse_genomes_project 13 74940077 74976880 - MGP_CBAJ_P0037142 Papd7 protein_coding unknown_likely_coding MGP_CBAJ_T0037143.1 MGP_CBAJ_G0020437.1 mouse_genomes_project 13 74940085 74981071 - MGP_CBAJ_P0037143 Papd7 protein_coding protein_coding MGP_CBAJ_T0037144.1 MGP_CBAJ_G0020437.1 mouse_genomes_project 13 74940088 74976562 - MGP_CBAJ_P0037144 Papd7 protein_coding protein_coding MGP_CBAJ_T0036899.1 MGP_CBAJ_G0020341.1 mouse_genomes_project 13 62046521 62051729 - MGP_CBAJ_P0036899 2210016F16Rik protein_coding protein_coding MGP_CBAJ_T0037502.1 MGP_CBAJ_G0020550.1 mouse_genomes_project 13 104526362 104527204 + Gm17190 protein_coding translated_processed_pseudogene MGP_CBAJ_T0037503.1 MGP_CBAJ_G0020550.1 mouse_genomes_project 13 104526466 104527532 + MGP_CBAJ_P0037503 Gm17190 protein_coding protein_coding MGP_CBAJ_T0097766.1 MGP_CBAJ_G0036039.1 mouse_genomes_project 13 11250431 11250838 - pseudogene pseudogene MGP_CBAJ_T0036224.1 MGP_CBAJ_G0020100.1 mouse_genomes_project 13 26815624 26832456 + MGP_CBAJ_P0036224 Prl3a1 protein_coding protein_coding MGP_CBAJ_T0012789.1 MGP_CBAJ_G0010901.1 mouse_genomes_project 13 101881396 101881724 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006501.1 MGP_CBAJ_G0005383.1 mouse_genomes_project 13 75512180 75538424 - 1700084F23Rik lincRNA lincRNA MGP_CBAJ_T0006502.1 MGP_CBAJ_G0005383.1 mouse_genomes_project 13 75524278 75537908 - 1700084F23Rik lincRNA lincRNA MGP_CBAJ_T0011232.1 MGP_CBAJ_G0009370.1 mouse_genomes_project 13 60193559 60193729 + Gm27271 misc_RNA misc_RNA MGP_CBAJ_T0100065.1 MGP_CBAJ_G0038320.1 mouse_genomes_project 13 69873711 69873860 + Gm24130 snoRNA snoRNA MGP_CBAJ_T0009827.1 MGP_CBAJ_G0007965.1 mouse_genomes_project 13 67842771 67842839 + Mir24-1 miRNA miRNA MGP_CBAJ_T0036266.1 MGP_CBAJ_G0020120.1 mouse_genomes_project 13 29938899 30022355 - MGP_CBAJ_P0036266 E2f3 protein_coding protein_coding MGP_CBAJ_T0036267.1 MGP_CBAJ_G0020120.1 mouse_genomes_project 13 29951108 30020906 - MGP_CBAJ_P0036267 E2f3 protein_coding protein_coding MGP_CBAJ_T0006427.1 MGP_CBAJ_G0005333.1 mouse_genomes_project 13 25659069 25693743 - 1700092E19Rik lincRNA lincRNA MGP_CBAJ_T0006428.1 MGP_CBAJ_G0005333.1 mouse_genomes_project 13 25687146 25693684 - 1700092E19Rik lincRNA lincRNA MGP_CBAJ_T0036762.1 MGP_CBAJ_G0020292.1 mouse_genomes_project 13 58234159 58249701 - MGP_CBAJ_P0036762 Hk3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036763.1 MGP_CBAJ_G0020292.1 mouse_genomes_project 13 58234235 58249309 - MGP_CBAJ_P0036763 Hk3 protein_coding protein_coding MGP_CBAJ_T0036764.1 MGP_CBAJ_G0020292.1 mouse_genomes_project 13 58234338 58247822 - MGP_CBAJ_P0036764 Hk3 protein_coding protein_coding MGP_CBAJ_T0036765.1 MGP_CBAJ_G0020292.1 mouse_genomes_project 13 58243353 58249702 - MGP_CBAJ_P0036765 Hk3 protein_coding protein_coding MGP_CBAJ_T0036766.1 MGP_CBAJ_G0020292.1 mouse_genomes_project 13 58243403 58249727 - MGP_CBAJ_P0036766 Hk3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036767.1 MGP_CBAJ_G0020292.1 mouse_genomes_project 13 58244091 58249622 - MGP_CBAJ_P0036767 Hk3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0003363.1 MGP_CBAJ_G0003088.1 mouse_genomes_project 13 21560327 21561141 + Gm11314 antisense antisense MGP_CBAJ_T0036768.1 MGP_CBAJ_G0020293.1 mouse_genomes_project 13 58256378 58344388 - MGP_CBAJ_P0036768 Uimc1 protein_coding protein_coding MGP_CBAJ_T0036769.1 MGP_CBAJ_G0020293.1 mouse_genomes_project 13 58256378 58344383 - MGP_CBAJ_P0036769 Uimc1 protein_coding protein_coding MGP_CBAJ_T0036770.1 MGP_CBAJ_G0020293.1 mouse_genomes_project 13 58256693 58344342 - MGP_CBAJ_P0036770 Uimc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036771.1 MGP_CBAJ_G0020293.1 mouse_genomes_project 13 58256795 58344388 - MGP_CBAJ_P0036771 Uimc1 protein_coding protein_coding MGP_CBAJ_T0036772.1 MGP_CBAJ_G0020293.1 mouse_genomes_project 13 58314462 58344387 - Uimc1 protein_coding retained_intron MGP_CBAJ_T0036773.1 MGP_CBAJ_G0020293.1 mouse_genomes_project 13 58326551 58337354 - Uimc1 protein_coding retained_intron MGP_CBAJ_T0098817.1 MGP_CBAJ_G0037072.1 mouse_genomes_project 13 104318055 104318214 - Gm24032 snRNA snRNA MGP_CBAJ_T0036454.1 MGP_CBAJ_G0020203.1 mouse_genomes_project 13 43649589 43787092 + MGP_CBAJ_P0036454 Hivep1 protein_coding protein_coding MGP_CBAJ_T0036990.1 MGP_CBAJ_G0020368.1 mouse_genomes_project 13 65248221 65256823 - MGP_CBAJ_P0036990 Cts8 protein_coding protein_coding MGP_CBAJ_T0037170.1 MGP_CBAJ_G0020448.1 mouse_genomes_project 13 79070612 79070912 + MGP_CBAJ_P0037170 Gm10263 protein_coding protein_coding MGP_CBAJ_T0009800.1 MGP_CBAJ_G0007938.1 mouse_genomes_project 13 22605443 22605571 + Gm44357 miRNA miRNA MGP_CBAJ_T0036007.1 MGP_CBAJ_G0019979.1 mouse_genomes_project 13 19859360 19865653 - MGP_CBAJ_P0036007 Gpx5 protein_coding protein_coding MGP_CBAJ_T0036008.1 MGP_CBAJ_G0019979.1 mouse_genomes_project 13 19859360 19865608 - MGP_CBAJ_P0036008 Gpx5 protein_coding protein_coding MGP_CBAJ_T0009803.1 MGP_CBAJ_G0007941.1 mouse_genomes_project 13 23023971 23024100 - Gm44344 miRNA miRNA MGP_CBAJ_T0036305.1 MGP_CBAJ_G0020140.1 mouse_genomes_project 13 33438107 33455238 + MGP_CBAJ_P0036305 Serpinb9 protein_coding protein_coding MGP_CBAJ_T0036306.1 MGP_CBAJ_G0020140.1 mouse_genomes_project 13 33439406 33455236 + MGP_CBAJ_P0036306 Serpinb9 protein_coding protein_coding MGP_CBAJ_T0035831.1 MGP_CBAJ_G0019922.1 mouse_genomes_project 13 2606363 2617401 + MGP_CBAJ_P0035831 Klf6 protein_coding protein_coding MGP_CBAJ_T0036645.1 MGP_CBAJ_G0020266.1 mouse_genomes_project 13 55470687 55539022 + MGP_CBAJ_P0036645 Syk protein_coding protein_coding MGP_CBAJ_T0036646.1 MGP_CBAJ_G0020266.1 mouse_genomes_project 13 55470951 55533857 + MGP_CBAJ_P0036646 Syk protein_coding protein_coding MGP_CBAJ_T0036647.1 MGP_CBAJ_G0020266.1 mouse_genomes_project 13 55471017 55502544 + Syk protein_coding retained_intron MGP_CBAJ_T0036648.1 MGP_CBAJ_G0020266.1 mouse_genomes_project 13 55485727 55539012 + MGP_CBAJ_P0036648 Syk protein_coding protein_coding MGP_CBAJ_T0036649.1 MGP_CBAJ_G0020266.1 mouse_genomes_project 13 55485833 55513184 + Syk protein_coding retained_intron MGP_CBAJ_T0012711.1 MGP_CBAJ_G0010823.1 mouse_genomes_project 13 19959481 19959921 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012754.1 MGP_CBAJ_G0010866.1 mouse_genomes_project 13 42204946 42206237 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0036455.1 MGP_CBAJ_G0020204.1 mouse_genomes_project 13 43913684 43920390 + MGP_CBAJ_P0036455 Edn1 protein_coding protein_coding MGP_CBAJ_T0100048.1 MGP_CBAJ_G0038303.1 mouse_genomes_project 13 21712245 21712376 - Gm23774 snoRNA snoRNA MGP_CBAJ_T0036058.1 MGP_CBAJ_G0020009.1 mouse_genomes_project 13 20420824 20474290 + MGP_CBAJ_P0036058 Hist1h2br protein_coding protein_coding MGP_CBAJ_T0036059.1 MGP_CBAJ_G0020009.1 mouse_genomes_project 13 20420836 20475155 + MGP_CBAJ_P0036059 Hist1h2br protein_coding protein_coding MGP_CBAJ_T0035940.1 MGP_CBAJ_G0019953.1 mouse_genomes_project 13 11953716 11964640 - MGP_CBAJ_P0035940 Ggps1 protein_coding protein_coding MGP_CBAJ_T0000838.1 MGP_CBAJ_G0000774.1 mouse_genomes_project 13 16292859 16299845 + TEC TEC MGP_CBAJ_T0037888.1 MGP_CBAJ_G0020682.1 mouse_genomes_project 13 131247128 131247584 + MGP_CBAJ_P0037888 protein_coding protein_coding MGP_CBAJ_T0037231.1 MGP_CBAJ_G0020472.1 mouse_genomes_project 13 80228306 80237718 - MGP_CBAJ_P0037231 Zfp72 protein_coding protein_coding MGP_CBAJ_T0037793.1 MGP_CBAJ_G0020636.1 mouse_genomes_project 13 122814459 122922399 + MGP_CBAJ_P0037793 Ankrd55 protein_coding protein_coding MGP_CBAJ_T0037794.1 MGP_CBAJ_G0020636.1 mouse_genomes_project 13 122814459 122879695 + MGP_CBAJ_P0037794 Ankrd55 protein_coding protein_coding MGP_CBAJ_T0037795.1 MGP_CBAJ_G0020636.1 mouse_genomes_project 13 122814459 122922401 + MGP_CBAJ_P0037795 Ankrd55 protein_coding protein_coding MGP_CBAJ_T0037796.1 MGP_CBAJ_G0020636.1 mouse_genomes_project 13 122814526 122893528 + MGP_CBAJ_P0037796 Ankrd55 protein_coding protein_coding MGP_CBAJ_T0003357.1 MGP_CBAJ_G0003083.1 mouse_genomes_project 13 17532794 17564650 - Gm43385 antisense antisense MGP_CBAJ_T0036402.1 MGP_CBAJ_G0020178.1 mouse_genomes_project 13 39102745 39135697 - MGP_CBAJ_P0036402 Cage1 protein_coding protein_coding MGP_CBAJ_T0036403.1 MGP_CBAJ_G0020178.1 mouse_genomes_project 13 39102747 39135711 - MGP_CBAJ_P0036403 Cage1 protein_coding protein_coding MGP_CBAJ_T0036404.1 MGP_CBAJ_G0020178.1 mouse_genomes_project 13 39119715 39135842 - MGP_CBAJ_P0036404 Cage1 protein_coding protein_coding MGP_CBAJ_T0036405.1 MGP_CBAJ_G0020178.1 mouse_genomes_project 13 39122040 39135711 - MGP_CBAJ_P0036405 Cage1 protein_coding protein_coding MGP_CBAJ_T0012729.1 MGP_CBAJ_G0010841.1 mouse_genomes_project 13 23424566 23425013 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0037339.1 MGP_CBAJ_G0020499.1 mouse_genomes_project 13 92212044 92294562 - MGP_CBAJ_P0037339 Rasa1 protein_coding protein_coding MGP_CBAJ_T0037340.1 MGP_CBAJ_G0020499.1 mouse_genomes_project 13 92213079 92215620 - Rasa1 protein_coding retained_intron MGP_CBAJ_T0037341.1 MGP_CBAJ_G0020499.1 mouse_genomes_project 13 92213315 92218980 - Rasa1 protein_coding retained_intron MGP_CBAJ_T0037342.1 MGP_CBAJ_G0020499.1 mouse_genomes_project 13 92218648 92223984 - Rasa1 protein_coding retained_intron MGP_CBAJ_T0037343.1 MGP_CBAJ_G0020499.1 mouse_genomes_project 13 92221497 92223295 - Rasa1 protein_coding retained_intron MGP_CBAJ_T0037344.1 MGP_CBAJ_G0020499.1 mouse_genomes_project 13 92225972 92228346 - Rasa1 protein_coding retained_intron MGP_CBAJ_T0037345.1 MGP_CBAJ_G0020499.1 mouse_genomes_project 13 92226562 92227751 - Rasa1 protein_coding retained_intron MGP_CBAJ_T0037346.1 MGP_CBAJ_G0020499.1 mouse_genomes_project 13 92235484 92244628 - Rasa1 protein_coding retained_intron MGP_CBAJ_T0037568.1 MGP_CBAJ_G0020573.1 mouse_genomes_project 13 107586686 107703132 - MGP_CBAJ_P0037568 Fcho2 protein_coding protein_coding MGP_CBAJ_T0037569.1 MGP_CBAJ_G0020573.1 mouse_genomes_project 13 107586686 107703132 - MGP_CBAJ_P0037569 Fcho2 protein_coding protein_coding MGP_CBAJ_T0037570.1 MGP_CBAJ_G0020573.1 mouse_genomes_project 13 107617804 107703132 - MGP_CBAJ_P0037570 Fcho2 protein_coding protein_coding MGP_CBAJ_T0037571.1 MGP_CBAJ_G0020573.1 mouse_genomes_project 13 107621888 107703132 - MGP_CBAJ_P0037571 Fcho2 protein_coding protein_coding MGP_CBAJ_T0036133.1 MGP_CBAJ_G0020063.1 mouse_genomes_project 13 22813423 22823380 + MGP_CBAJ_P0036133 Hist1h2bj protein_coding protein_coding MGP_CBAJ_T0037530.1 MGP_CBAJ_G0020559.1 mouse_genomes_project 13 105686609 105762926 + MGP_CBAJ_P0037530 Fam169a protein_coding protein_coding MGP_CBAJ_T0037531.1 MGP_CBAJ_G0020559.1 mouse_genomes_project 13 105696074 105762926 + MGP_CBAJ_P0037531 Fam169a protein_coding protein_coding MGP_CBAJ_T0037051.1 MGP_CBAJ_G0020388.1 mouse_genomes_project 13 69434986 69611628 - MGP_CBAJ_P0037051 Cntnap3 protein_coding protein_coding MGP_CBAJ_T0036446.1 MGP_CBAJ_G0020199.1 mouse_genomes_project 13 42817745 43014646 - MGP_CBAJ_P0036446 Nedd9 protein_coding protein_coding MGP_CBAJ_T0036447.1 MGP_CBAJ_G0020199.1 mouse_genomes_project 13 42817745 42868392 - MGP_CBAJ_P0036447 Nedd9 protein_coding protein_coding MGP_CBAJ_T0037232.1 MGP_CBAJ_G0020473.1 mouse_genomes_project 13 80591351 80661426 + MGP_CBAJ_P0037232 Erap1 protein_coding protein_coding MGP_CBAJ_T0037225.1 MGP_CBAJ_G0020470.1 mouse_genomes_project 13 80207597 80224950 + MGP_CBAJ_P0037225 Ccdc127 protein_coding protein_coding MGP_CBAJ_T0037226.1 MGP_CBAJ_G0020470.1 mouse_genomes_project 13 80207605 80221868 + MGP_CBAJ_P0037226 Ccdc127 protein_coding protein_coding MGP_CBAJ_T0037227.1 MGP_CBAJ_G0020470.1 mouse_genomes_project 13 80207632 80220252 + MGP_CBAJ_P0037227 Ccdc127 protein_coding protein_coding MGP_CBAJ_T0037228.1 MGP_CBAJ_G0020470.1 mouse_genomes_project 13 80207633 80219862 + MGP_CBAJ_P0037228 Ccdc127 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037229.1 MGP_CBAJ_G0020470.1 mouse_genomes_project 13 80207653 80216215 + MGP_CBAJ_P0037229 Ccdc127 protein_coding protein_coding MGP_CBAJ_T0036142.1 MGP_CBAJ_G0020072.1 mouse_genomes_project 13 22846350 22846992 + MGP_CBAJ_P0036142 Hist1h1a protein_coding protein_coding MGP_CBAJ_T0000844.1 MGP_CBAJ_G0000779.1 mouse_genomes_project 13 42162426 42165064 - TEC TEC MGP_CBAJ_T0036038.1 MGP_CBAJ_G0019993.1 mouse_genomes_project 13 20160376 20161320 - MGP_CBAJ_P0036038 Olfr1535 protein_coding protein_coding MGP_CBAJ_T0036621.1 MGP_CBAJ_G0020260.1 mouse_genomes_project 13 54467383 54472833 + MGP_CBAJ_P0036621 Cks2 protein_coding protein_coding MGP_CBAJ_T0037673.1 MGP_CBAJ_G0020602.1 mouse_genomes_project 13 113267816 113293571 - MGP_CBAJ_P0037673 Srek1 protein_coding protein_coding MGP_CBAJ_T0037655.1 MGP_CBAJ_G0020601.1 mouse_genomes_project 13 112165536 112827405 - MGP_CBAJ_P0037655 Mast4 protein_coding protein_coding MGP_CBAJ_T0037656.1 MGP_CBAJ_G0020601.1 mouse_genomes_project 13 112165541 112827673 - MGP_CBAJ_P0037656 Mast4 protein_coding protein_coding MGP_CBAJ_T0037657.1 MGP_CBAJ_G0020601.1 mouse_genomes_project 13 112167841 112559519 - MGP_CBAJ_P0037657 Mast4 protein_coding protein_coding MGP_CBAJ_T0037658.1 MGP_CBAJ_G0020601.1 mouse_genomes_project 13 112168060 112396584 - MGP_CBAJ_P0037658 Mast4 protein_coding protein_coding MGP_CBAJ_T0037659.1 MGP_CBAJ_G0020601.1 mouse_genomes_project 13 112168060 112340427 - MGP_CBAJ_P0037659 Mast4 protein_coding protein_coding MGP_CBAJ_T0037660.1 MGP_CBAJ_G0020601.1 mouse_genomes_project 13 112175041 112340107 - MGP_CBAJ_P0037660 Mast4 protein_coding protein_coding MGP_CBAJ_T0037661.1 MGP_CBAJ_G0020601.1 mouse_genomes_project 13 112187202 112396466 - MGP_CBAJ_P0037661 Mast4 protein_coding protein_coding MGP_CBAJ_T0037662.1 MGP_CBAJ_G0020601.1 mouse_genomes_project 13 112201843 112206108 - Mast4 protein_coding retained_intron MGP_CBAJ_T0037663.1 MGP_CBAJ_G0020601.1 mouse_genomes_project 13 112212860 112217095 - Mast4 protein_coding retained_intron MGP_CBAJ_T0037664.1 MGP_CBAJ_G0020601.1 mouse_genomes_project 13 112229222 112559502 - MGP_CBAJ_P0037664 Mast4 protein_coding protein_coding MGP_CBAJ_T0037665.1 MGP_CBAJ_G0020601.1 mouse_genomes_project 13 112232001 112236013 - Mast4 protein_coding retained_intron MGP_CBAJ_T0037666.1 MGP_CBAJ_G0020601.1 mouse_genomes_project 13 112281704 112827673 - MGP_CBAJ_P0037666 Mast4 protein_coding protein_coding MGP_CBAJ_T0037667.1 MGP_CBAJ_G0020601.1 mouse_genomes_project 13 112282860 112340396 - Mast4 protein_coding retained_intron MGP_CBAJ_T0037668.1 MGP_CBAJ_G0020601.1 mouse_genomes_project 13 112471856 112827675 - Mast4 protein_coding retained_intron MGP_CBAJ_T0037669.1 MGP_CBAJ_G0020601.1 mouse_genomes_project 13 112516908 112827710 - Mast4 protein_coding processed_transcript MGP_CBAJ_T0037670.1 MGP_CBAJ_G0020601.1 mouse_genomes_project 13 112532845 112827664 - Mast4 protein_coding processed_transcript MGP_CBAJ_T0037671.1 MGP_CBAJ_G0020601.1 mouse_genomes_project 13 112556849 112559518 - Mast4 protein_coding retained_intron MGP_CBAJ_T0037672.1 MGP_CBAJ_G0020601.1 mouse_genomes_project 13 112826184 112827705 - Mast4 protein_coding retained_intron MGP_CBAJ_T0036252.1 MGP_CBAJ_G0020116.1 mouse_genomes_project 13 27819079 27826376 + MGP_CBAJ_P0036252 Prl4a1 protein_coding protein_coding MGP_CBAJ_T0037217.1 MGP_CBAJ_G0020469.1 mouse_genomes_project 13 80177325 80207569 - MGP_CBAJ_P0037217 Sdha protein_coding protein_coding MGP_CBAJ_T0037218.1 MGP_CBAJ_G0020469.1 mouse_genomes_project 13 80177803 80179328 - Sdha protein_coding retained_intron MGP_CBAJ_T0037219.1 MGP_CBAJ_G0020469.1 mouse_genomes_project 13 80184587 80185764 - Sdha protein_coding retained_intron MGP_CBAJ_T0037220.1 MGP_CBAJ_G0020469.1 mouse_genomes_project 13 80194774 80207491 - Sdha protein_coding processed_transcript MGP_CBAJ_T0037221.1 MGP_CBAJ_G0020469.1 mouse_genomes_project 13 80196285 80197049 - Sdha protein_coding retained_intron MGP_CBAJ_T0037222.1 MGP_CBAJ_G0020469.1 mouse_genomes_project 13 80200534 80207528 - Sdha protein_coding retained_intron MGP_CBAJ_T0037223.1 MGP_CBAJ_G0020469.1 mouse_genomes_project 13 80202170 80207446 - Sdha protein_coding processed_transcript MGP_CBAJ_T0037224.1 MGP_CBAJ_G0020469.1 mouse_genomes_project 13 80202209 80207524 - Sdha protein_coding processed_transcript MGP_CBAJ_T0100082.1 MGP_CBAJ_G0038337.1 mouse_genomes_project 13 116821678 116821744 - Gm24431 snoRNA snoRNA MGP_CBAJ_T0036429.1 MGP_CBAJ_G0020191.1 mouse_genomes_project 13 42478682 42493354 + MGP_CBAJ_P0036429 Pak1ip1 protein_coding protein_coding MGP_CBAJ_T0036430.1 MGP_CBAJ_G0020191.1 mouse_genomes_project 13 42478683 42486249 + Pak1ip1 protein_coding retained_intron MGP_CBAJ_T0036431.1 MGP_CBAJ_G0020191.1 mouse_genomes_project 13 42478897 42493346 + Pak1ip1 protein_coding retained_intron MGP_CBAJ_T0036432.1 MGP_CBAJ_G0020191.1 mouse_genomes_project 13 42478919 42485898 + Pak1ip1 protein_coding processed_transcript MGP_CBAJ_T0036433.1 MGP_CBAJ_G0020191.1 mouse_genomes_project 13 42478925 42493358 + Pak1ip1 protein_coding retained_intron MGP_CBAJ_T0036992.1 MGP_CBAJ_G0020370.1 mouse_genomes_project 13 65542889 65548266 - MGP_CBAJ_P0036992 Ctsm protein_coding protein_coding MGP_CBAJ_T0100074.1 MGP_CBAJ_G0038329.1 mouse_genomes_project 13 88761580 88761711 + Gm24295 snoRNA snoRNA MGP_CBAJ_T0036793.1 MGP_CBAJ_G0020300.1 mouse_genomes_project 13 58607397 58612127 - MGP_CBAJ_P0036793 Mxd3 protein_coding protein_coding MGP_CBAJ_T0036794.1 MGP_CBAJ_G0020300.1 mouse_genomes_project 13 58607711 58612102 - Mxd3 protein_coding retained_intron MGP_CBAJ_T0036795.1 MGP_CBAJ_G0020300.1 mouse_genomes_project 13 58607941 58611721 - Mxd3 protein_coding processed_transcript MGP_CBAJ_T0037202.1 MGP_CBAJ_G0020461.1 mouse_genomes_project 13 79777588 79815583 + MGP_CBAJ_P0037202 Zdhhc11 protein_coding protein_coding MGP_CBAJ_T0037037.1 MGP_CBAJ_G0020380.1 mouse_genomes_project 13 68730299 68765714 - MGP_CBAJ_P0037037 Slc35d2 protein_coding protein_coding MGP_CBAJ_T0037627.1 MGP_CBAJ_G0020594.1 mouse_genomes_project 13 109857837 109895166 - MGP_CBAJ_P0037627 Cdk7 protein_coding protein_coding MGP_CBAJ_T0098806.1 MGP_CBAJ_G0037061.1 mouse_genomes_project 13 45634449 45634557 + Gm23117 snRNA snRNA MGP_CBAJ_T0036551.1 MGP_CBAJ_G0020234.1 mouse_genomes_project 13 50880953 50882243 + MGP_CBAJ_P0036551 A830005F24Rik protein_coding protein_coding MGP_CBAJ_T0036705.1 MGP_CBAJ_G0020284.1 mouse_genomes_project 13 57802751 57848570 + MGP_CBAJ_P0036705 Faf2 protein_coding protein_coding MGP_CBAJ_T0036706.1 MGP_CBAJ_G0020284.1 mouse_genomes_project 13 57802771 57824291 + MGP_CBAJ_P0036706 Faf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036707.1 MGP_CBAJ_G0020284.1 mouse_genomes_project 13 57802791 57846088 + MGP_CBAJ_P0036707 Faf2 protein_coding protein_coding MGP_CBAJ_T0036708.1 MGP_CBAJ_G0020284.1 mouse_genomes_project 13 57802802 57831050 + MGP_CBAJ_P0036708 Faf2 protein_coding protein_coding MGP_CBAJ_T0036709.1 MGP_CBAJ_G0020284.1 mouse_genomes_project 13 57802802 57831161 + MGP_CBAJ_P0036709 Faf2 protein_coding protein_coding MGP_CBAJ_T0036710.1 MGP_CBAJ_G0020284.1 mouse_genomes_project 13 57802805 57839214 + MGP_CBAJ_P0036710 Faf2 protein_coding protein_coding MGP_CBAJ_T0036711.1 MGP_CBAJ_G0020284.1 mouse_genomes_project 13 57824293 57838376 + MGP_CBAJ_P0036711 Faf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036712.1 MGP_CBAJ_G0020284.1 mouse_genomes_project 13 57834173 57838401 + Faf2 protein_coding retained_intron MGP_CBAJ_T0036035.1 MGP_CBAJ_G0019991.1 mouse_genomes_project 13 20142273 20143327 - MGP_CBAJ_P0036035 protein_coding protein_coding MGP_CBAJ_T0036037.1 MGP_CBAJ_G0019991.1 mouse_genomes_project 13 20142537 20148090 - MGP_CBAJ_P0036037 protein_coding protein_coding MGP_CBAJ_T0006543.1 MGP_CBAJ_G0005413.1 mouse_genomes_project 13 122302217 122304509 - Gm15325 lincRNA lincRNA MGP_CBAJ_T0037735.1 MGP_CBAJ_G0020624.1 mouse_genomes_project 13 118036785 118163149 - MGP_CBAJ_P0037735 Ndufaf2 protein_coding protein_coding MGP_CBAJ_T0036738.1 MGP_CBAJ_G0020289.1 mouse_genomes_project 13 57986736 57990231 + MGP_CBAJ_P0036738 Eif4e1b protein_coding protein_coding MGP_CBAJ_T0036739.1 MGP_CBAJ_G0020289.1 mouse_genomes_project 13 57986739 57989386 + MGP_CBAJ_P0036739 Eif4e1b protein_coding protein_coding MGP_CBAJ_T0036740.1 MGP_CBAJ_G0020289.1 mouse_genomes_project 13 57986739 57991001 + MGP_CBAJ_P0036740 Eif4e1b protein_coding protein_coding MGP_CBAJ_T0036741.1 MGP_CBAJ_G0020289.1 mouse_genomes_project 13 57986739 57989719 + MGP_CBAJ_P0036741 Eif4e1b protein_coding protein_coding MGP_CBAJ_T0036742.1 MGP_CBAJ_G0020289.1 mouse_genomes_project 13 57986739 57990231 + MGP_CBAJ_P0036742 Eif4e1b protein_coding protein_coding MGP_CBAJ_T0036743.1 MGP_CBAJ_G0020289.1 mouse_genomes_project 13 57986741 57990240 + MGP_CBAJ_P0036743 Eif4e1b protein_coding protein_coding MGP_CBAJ_T0036744.1 MGP_CBAJ_G0020289.1 mouse_genomes_project 13 57986741 57990232 + MGP_CBAJ_P0036744 Eif4e1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0036745.1 MGP_CBAJ_G0020289.1 mouse_genomes_project 13 57986741 57991970 + MGP_CBAJ_P0036745 Eif4e1b protein_coding protein_coding MGP_CBAJ_T0036746.1 MGP_CBAJ_G0020289.1 mouse_genomes_project 13 57986751 57991962 + MGP_CBAJ_P0036746 Eif4e1b protein_coding protein_coding MGP_CBAJ_T0036747.1 MGP_CBAJ_G0020289.1 mouse_genomes_project 13 57986758 57991008 + MGP_CBAJ_P0036747 Eif4e1b protein_coding protein_coding MGP_CBAJ_T0037844.1 MGP_CBAJ_G0020659.1 mouse_genomes_project 13 125625926 125737082 - MGP_CBAJ_P0037844 Itga2 protein_coding protein_coding MGP_CBAJ_T0006507.1 MGP_CBAJ_G0005388.1 mouse_genomes_project 13 87576744 87753639 + 9330111N05Rik lincRNA lincRNA MGP_CBAJ_T0006508.1 MGP_CBAJ_G0005388.1 mouse_genomes_project 13 87577935 87707344 + 9330111N05Rik lincRNA lincRNA MGP_CBAJ_T0006509.1 MGP_CBAJ_G0005388.1 mouse_genomes_project 13 87595822 87756078 + 9330111N05Rik lincRNA lincRNA MGP_CBAJ_T0036684.1 MGP_CBAJ_G0020279.1 mouse_genomes_project 13 57717772 57735445 - MGP_CBAJ_P0036684 4833439L19Rik protein_coding protein_coding MGP_CBAJ_T0036685.1 MGP_CBAJ_G0020279.1 mouse_genomes_project 13 57717772 57735577 - MGP_CBAJ_P0036685 4833439L19Rik protein_coding protein_coding MGP_CBAJ_T0036686.1 MGP_CBAJ_G0020279.1 mouse_genomes_project 13 57719056 57735475 - 4833439L19Rik protein_coding processed_transcript MGP_CBAJ_T0036687.1 MGP_CBAJ_G0020279.1 mouse_genomes_project 13 57725837 57735433 - 4833439L19Rik protein_coding retained_intron MGP_CBAJ_T0036688.1 MGP_CBAJ_G0020279.1 mouse_genomes_project 13 57726011 57735480 - 4833439L19Rik protein_coding retained_intron MGP_CBAJ_T0036689.1 MGP_CBAJ_G0020279.1 mouse_genomes_project 13 57726348 57735472 - MGP_CBAJ_P0036689 4833439L19Rik protein_coding protein_coding MGP_CBAJ_T0036690.1 MGP_CBAJ_G0020279.1 mouse_genomes_project 13 57731551 57735486 - 4833439L19Rik protein_coding retained_intron MGP_CBAJ_T0036691.1 MGP_CBAJ_G0020279.1 mouse_genomes_project 13 57731673 57735498 - MGP_CBAJ_P0036691 4833439L19Rik protein_coding protein_coding MGP_CBAJ_T0036692.1 MGP_CBAJ_G0020279.1 mouse_genomes_project 13 57731688 57735467 - MGP_CBAJ_P0036692 4833439L19Rik protein_coding protein_coding MGP_CBAJ_T0036268.1 MGP_CBAJ_G0020121.1 mouse_genomes_project 13 30212540 30337754 + MGP_CBAJ_P0036268 Mboat1 protein_coding protein_coding MGP_CBAJ_T0036269.1 MGP_CBAJ_G0020121.1 mouse_genomes_project 13 30212573 30320850 + MGP_CBAJ_P0036269 Mboat1 protein_coding protein_coding MGP_CBAJ_T0036270.1 MGP_CBAJ_G0020121.1 mouse_genomes_project 13 30212588 30245475 + Mboat1 protein_coding processed_transcript MGP_CBAJ_T0036348.1 MGP_CBAJ_G0020159.1 mouse_genomes_project 13 34798105 34806090 + MGP_CBAJ_P0036348 Psmg4 protein_coding protein_coding MGP_CBAJ_T0036349.1 MGP_CBAJ_G0020159.1 mouse_genomes_project 13 34798105 34806094 + MGP_CBAJ_P0036349 Psmg4 protein_coding protein_coding MGP_CBAJ_T0101592.1 MGP_CBAJ_G0039623.1 mouse_genomes_project 13 21179679 21180450 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0036143.1 MGP_CBAJ_G0020073.1 mouse_genomes_project 13 22865004 22873894 + MGP_CBAJ_P0036143 Trim38 protein_coding protein_coding MGP_CBAJ_T0003430.1 MGP_CBAJ_G0003128.1 mouse_genomes_project 13 112195520 112199811 + antisense antisense MGP_CBAJ_T0101614.1 MGP_CBAJ_G0039645.1 mouse_genomes_project 13 26892575 26895670 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0036083.1 MGP_CBAJ_G0020023.1 mouse_genomes_project 13 21079444 21080347 + MGP_CBAJ_P0036083 Vmn1r198 protein_coding protein_coding MGP_CBAJ_T0036619.1 MGP_CBAJ_G0020258.1 mouse_genomes_project 13 54209848 54224030 + MGP_CBAJ_P0036619 S1pr3 protein_coding protein_coding MGP_CBAJ_T0036541.1 MGP_CBAJ_G0020231.1 mouse_genomes_project 13 49277226 49425933 + MGP_CBAJ_P0036541 Rnf144b protein_coding protein_coding MGP_CBAJ_T0036542.1 MGP_CBAJ_G0020231.1 mouse_genomes_project 13 49365645 49425933 + MGP_CBAJ_P0036542 Rnf144b protein_coding protein_coding MGP_CBAJ_T0012760.1 MGP_CBAJ_G0010872.1 mouse_genomes_project 13 67242256 67242592 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003374.1 MGP_CBAJ_G0003097.1 mouse_genomes_project 13 43355274 43356287 + 1700061E18Rik antisense antisense MGP_CBAJ_T0037208.1 MGP_CBAJ_G0020464.1 mouse_genomes_project 13 79862166 79892444 - MGP_CBAJ_P0037208 Cep72 protein_coding protein_coding MGP_CBAJ_T0037209.1 MGP_CBAJ_G0020464.1 mouse_genomes_project 13 79863834 79892421 - MGP_CBAJ_P0037209 Cep72 protein_coding unknown_likely_coding MGP_CBAJ_T0012762.1 MGP_CBAJ_G0010874.1 mouse_genomes_project 13 68559892 68560485 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006421.1 MGP_CBAJ_G0005328.1 mouse_genomes_project 13 22426725 22429773 - C230035I16Rik lincRNA lincRNA MGP_CBAJ_T0006422.1 MGP_CBAJ_G0005328.1 mouse_genomes_project 13 22426857 22429577 - C230035I16Rik lincRNA lincRNA MGP_CBAJ_T0037017.1 MGP_CBAJ_G0020377.1 mouse_genomes_project 13 68068080 68127702 - MGP_CBAJ_P0037017 Ptch1 protein_coding protein_coding MGP_CBAJ_T0037018.1 MGP_CBAJ_G0020377.1 mouse_genomes_project 13 68068081 68135602 - MGP_CBAJ_P0037018 Ptch1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037019.1 MGP_CBAJ_G0020377.1 mouse_genomes_project 13 68073338 68074069 - Ptch1 protein_coding retained_intron MGP_CBAJ_T0037020.1 MGP_CBAJ_G0020377.1 mouse_genomes_project 13 68077641 68125957 - MGP_CBAJ_P0037020 Ptch1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037021.1 MGP_CBAJ_G0020377.1 mouse_genomes_project 13 68105318 68127416 - MGP_CBAJ_P0037021 Ptch1 protein_coding protein_coding MGP_CBAJ_T0037022.1 MGP_CBAJ_G0020377.1 mouse_genomes_project 13 68105318 68126468 - MGP_CBAJ_P0037022 Ptch1 protein_coding protein_coding MGP_CBAJ_T0037023.1 MGP_CBAJ_G0020377.1 mouse_genomes_project 13 68105318 68135740 - MGP_CBAJ_P0037023 Ptch1 protein_coding protein_coding MGP_CBAJ_T0036076.1 MGP_CBAJ_G0020016.1 mouse_genomes_project 13 20738072 20738819 - MGP_CBAJ_P0036076 protein_coding protein_coding MGP_CBAJ_T0009818.1 MGP_CBAJ_G0007956.1 mouse_genomes_project 13 61662130 61662206 - Mir874 miRNA miRNA MGP_CBAJ_T0035989.1 MGP_CBAJ_G0019971.1 mouse_genomes_project 13 18076624 18137584 - MGP_CBAJ_P0035989 Nme8 protein_coding protein_coding MGP_CBAJ_T0035990.1 MGP_CBAJ_G0019971.1 mouse_genomes_project 13 18076624 18137618 - MGP_CBAJ_P0035990 Nme8 protein_coding protein_coding MGP_CBAJ_T0035991.1 MGP_CBAJ_G0019971.1 mouse_genomes_project 13 18112692 18125347 - Nme8 protein_coding processed_transcript MGP_CBAJ_T0036319.1 MGP_CBAJ_G0020151.1 mouse_genomes_project 13 34487281 34505997 - MGP_CBAJ_P0036319 Serpinb6c protein_coding protein_coding MGP_CBAJ_T0036320.1 MGP_CBAJ_G0020151.1 mouse_genomes_project 13 34487282 34506535 - MGP_CBAJ_P0036320 Serpinb6c protein_coding protein_coding MGP_CBAJ_T0003373.1 MGP_CBAJ_G0003096.1 mouse_genomes_project 13 42146226 42155618 + Gm26688 antisense antisense MGP_CBAJ_T0036243.1 MGP_CBAJ_G0020111.1 mouse_genomes_project 13 27348130 27357372 - MGP_CBAJ_P0036243 Prl7d1 protein_coding protein_coding MGP_CBAJ_T0036244.1 MGP_CBAJ_G0020111.1 mouse_genomes_project 13 27357041 27357360 - Prl7d1 protein_coding processed_transcript MGP_CBAJ_T0036801.1 MGP_CBAJ_G0020304.1 mouse_genomes_project 13 58715312 58715726 - MGP_CBAJ_P0036801 Pfn3 protein_coding protein_coding MGP_CBAJ_T0037236.1 MGP_CBAJ_G0020476.1 mouse_genomes_project 13 81819608 81890355 + MGP_CBAJ_P0037236 Ell2 protein_coding protein_coding MGP_CBAJ_T0100042.1 MGP_CBAJ_G0038297.1 mouse_genomes_project 13 6056198 6056331 - snoRNA snoRNA MGP_CBAJ_T0036677.1 MGP_CBAJ_G0020278.1 mouse_genomes_project 13 57662242 57717951 + MGP_CBAJ_P0036677 Simc1 protein_coding protein_coding MGP_CBAJ_T0036678.1 MGP_CBAJ_G0020278.1 mouse_genomes_project 13 57662242 57717951 + MGP_CBAJ_P0036678 Simc1 protein_coding protein_coding MGP_CBAJ_T0036679.1 MGP_CBAJ_G0020278.1 mouse_genomes_project 13 57662267 57701200 + MGP_CBAJ_P0036679 Simc1 protein_coding protein_coding MGP_CBAJ_T0036680.1 MGP_CBAJ_G0020278.1 mouse_genomes_project 13 57662272 57701199 + MGP_CBAJ_P0036680 Simc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036681.1 MGP_CBAJ_G0020278.1 mouse_genomes_project 13 57670902 57685348 + Simc1 protein_coding processed_transcript MGP_CBAJ_T0036682.1 MGP_CBAJ_G0020278.1 mouse_genomes_project 13 57690025 57701316 + Simc1 protein_coding retained_intron MGP_CBAJ_T0036683.1 MGP_CBAJ_G0020278.1 mouse_genomes_project 13 57710206 57717338 + Simc1 protein_coding retained_intron MGP_CBAJ_T0009832.1 MGP_CBAJ_G0007970.1 mouse_genomes_project 13 98579176 98579286 + Gm44338 miRNA miRNA MGP_CBAJ_T0036520.1 MGP_CBAJ_G0020226.1 mouse_genomes_project 13 48866222 49073332 - MGP_CBAJ_P0036520 Kif13a protein_coding protein_coding MGP_CBAJ_T0036521.1 MGP_CBAJ_G0020226.1 mouse_genomes_project 13 48866223 49073193 - MGP_CBAJ_P0036521 Kif13a protein_coding unknown_likely_coding MGP_CBAJ_T0037880.1 MGP_CBAJ_G0020676.1 mouse_genomes_project 13 130997072 131032595 + MGP_CBAJ_P0037880 Ccl28 protein_coding protein_coding MGP_CBAJ_T0100055.1 MGP_CBAJ_G0038310.1 mouse_genomes_project 13 46738871 46738990 - Gm22213 snoRNA snoRNA MGP_CBAJ_T0037617.1 MGP_CBAJ_G0020589.1 mouse_genomes_project 13 109735169 109756305 - MGP_CBAJ_P0037617 Marveld2 protein_coding protein_coding MGP_CBAJ_T0037618.1 MGP_CBAJ_G0020589.1 mouse_genomes_project 13 109735169 109756278 - MGP_CBAJ_P0037618 Marveld2 protein_coding protein_coding MGP_CBAJ_T0037619.1 MGP_CBAJ_G0020589.1 mouse_genomes_project 13 109736442 109756245 - MGP_CBAJ_P0037619 Marveld2 protein_coding protein_coding MGP_CBAJ_T0037774.1 MGP_CBAJ_G0020630.1 mouse_genomes_project 13 120595144 120599708 - MGP_CBAJ_P0037774 Gapt protein_coding protein_coding MGP_CBAJ_T0037713.1 MGP_CBAJ_G0020617.1 mouse_genomes_project 13 115141483 115145924 + MGP_CBAJ_P0037713 Htr1a protein_coding protein_coding MGP_CBAJ_T0037157.1 MGP_CBAJ_G0020443.1 mouse_genomes_project 13 76305187 76432964 - MGP_CBAJ_P0037157 Adamts16 protein_coding protein_coding MGP_CBAJ_T0037158.1 MGP_CBAJ_G0020443.1 mouse_genomes_project 13 76305195 76432928 - MGP_CBAJ_P0037158 Adamts16 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037159.1 MGP_CBAJ_G0020443.1 mouse_genomes_project 13 76338691 76432964 - MGP_CBAJ_P0037159 Adamts16 protein_coding protein_coding MGP_CBAJ_T0037160.1 MGP_CBAJ_G0020443.1 mouse_genomes_project 13 76423804 76432961 - Adamts16 protein_coding retained_intron MGP_CBAJ_T0101629.1 MGP_CBAJ_G0039660.1 mouse_genomes_project 13 62079826 62081677 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0037161.1 MGP_CBAJ_G0020444.1 mouse_genomes_project 13 76481194 76482750 + MGP_CBAJ_P0037161 8030423J24Rik protein_coding protein_coding MGP_CBAJ_T0036602.1 MGP_CBAJ_G0020253.1 mouse_genomes_project 13 52448339 52453818 - MGP_CBAJ_P0036602 Gm8674 protein_coding protein_coding MGP_CBAJ_T0036553.1 MGP_CBAJ_G0020236.1 mouse_genomes_project 13 51040868 51044378 + MGP_CBAJ_P0036553 Barx1 protein_coding protein_coding MGP_CBAJ_T0036979.1 MGP_CBAJ_G0020359.1 mouse_genomes_project 13 64771226 64797619 - MGP_CBAJ_P0036979 4930486L24Rik protein_coding protein_coding MGP_CBAJ_T0035802.1 MGP_CBAJ_G0019906.1 mouse_genomes_project 13 361400 362826 - MGP_CBAJ_P0035802 Calml3 protein_coding protein_coding MGP_CBAJ_T0037237.1 MGP_CBAJ_G0020477.1 mouse_genomes_project 13 81949066 81960322 + MGP_CBAJ_P0037237 Glrx protein_coding protein_coding MGP_CBAJ_T0036052.1 MGP_CBAJ_G0020004.1 mouse_genomes_project 13 20380843 20381155 - MGP_CBAJ_P0036052 Hist1h4k protein_coding protein_coding MGP_CBAJ_T0009817.1 MGP_CBAJ_G0007955.1 mouse_genomes_project 13 58832212 58832280 - Mir6945 miRNA miRNA MGP_CBAJ_T0035809.1 MGP_CBAJ_G0019912.1 mouse_genomes_project 13 623301 655308 + MGP_CBAJ_P0035809 Akr1c14 protein_coding protein_coding MGP_CBAJ_T0035810.1 MGP_CBAJ_G0019912.1 mouse_genomes_project 13 633876 655299 + MGP_CBAJ_P0035810 Akr1c14 protein_coding protein_coding MGP_CBAJ_T0035811.1 MGP_CBAJ_G0019912.1 mouse_genomes_project 13 642161 653882 + Akr1c14 protein_coding processed_transcript MGP_CBAJ_T0009806.1 MGP_CBAJ_G0007944.1 mouse_genomes_project 13 39184809 39184925 + Gm27387 miRNA miRNA MGP_CBAJ_T0036309.1 MGP_CBAJ_G0020143.1 mouse_genomes_project 13 33603748 33615463 - MGP_CBAJ_P0036309 Serpinb9c protein_coding protein_coding MGP_CBAJ_T0036310.1 MGP_CBAJ_G0020143.1 mouse_genomes_project 13 33612186 33614216 - MGP_CBAJ_P0036310 Serpinb9c protein_coding protein_coding MGP_CBAJ_T0017090.1 MGP_CBAJ_G0014990.1 mouse_genomes_project 13 22832250 22835870 - processed_transcript processed_transcript MGP_CBAJ_T0037154.1 MGP_CBAJ_G0020440.1 mouse_genomes_project 13 75170791 75214428 - MGP_CBAJ_P0037154 Ube2ql1 protein_coding protein_coding MGP_CBAJ_T0003382.1 MGP_CBAJ_G0003105.1 mouse_genomes_project 13 58935802 58938405 - Gm15911 antisense antisense MGP_CBAJ_T0009792.1 MGP_CBAJ_G0007930.1 mouse_genomes_project 13 15995504 15995635 + Mir466i miRNA miRNA MGP_CBAJ_T0036757.1 MGP_CBAJ_G0020291.1 mouse_genomes_project 13 58175080 58234186 + MGP_CBAJ_P0036757 Unc5a protein_coding protein_coding MGP_CBAJ_T0036758.1 MGP_CBAJ_G0020291.1 mouse_genomes_project 13 58175080 58234186 + MGP_CBAJ_P0036758 Unc5a protein_coding protein_coding MGP_CBAJ_T0036759.1 MGP_CBAJ_G0020291.1 mouse_genomes_project 13 58224730 58227970 + MGP_CBAJ_P0036759 Unc5a protein_coding protein_coding MGP_CBAJ_T0036760.1 MGP_CBAJ_G0020291.1 mouse_genomes_project 13 58231177 58232821 + Unc5a protein_coding retained_intron MGP_CBAJ_T0036761.1 MGP_CBAJ_G0020291.1 mouse_genomes_project 13 58231847 58233654 + MGP_CBAJ_P0036761 Unc5a protein_coding protein_coding MGP_CBAJ_T0037548.1 MGP_CBAJ_G0020565.1 mouse_genomes_project 13 107061490 107079634 - MGP_CBAJ_P0037548 Utp15 protein_coding protein_coding MGP_CBAJ_T0009845.1 MGP_CBAJ_G0007983.1 mouse_genomes_project 13 125337486 125337586 + Gm25950 miRNA miRNA MGP_CBAJ_T0037854.1 MGP_CBAJ_G0020665.1 mouse_genomes_project 13 128381588 128437093 + MGP_CBAJ_P0037854 Emb protein_coding protein_coding MGP_CBAJ_T0098821.1 MGP_CBAJ_G0037076.1 mouse_genomes_project 13 116587154 116587261 - Gm24527 snRNA snRNA MGP_CBAJ_T0012742.1 MGP_CBAJ_G0010854.1 mouse_genomes_project 13 28749728 28750819 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0036438.1 MGP_CBAJ_G0020194.1 mouse_genomes_project 13 42590862 42599365 - MGP_CBAJ_P0036438 Gcm2 protein_coding protein_coding MGP_CBAJ_T0037081.1 MGP_CBAJ_G0020402.1 mouse_genomes_project 13 71989732 72002130 - MGP_CBAJ_P0037081 protein_coding protein_coding MGP_CBAJ_T0037085.1 MGP_CBAJ_G0020402.1 mouse_genomes_project 13 71989735 72002163 - MGP_CBAJ_P0037085 protein_coding protein_coding MGP_CBAJ_T0037563.1 MGP_CBAJ_G0020569.1 mouse_genomes_project 13 107174195 107176654 + MGP_CBAJ_P0037563 Foxd1 protein_coding protein_coding MGP_CBAJ_T0101595.1 MGP_CBAJ_G0039626.1 mouse_genomes_project 13 21239510 21239875 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0035797.1 MGP_CBAJ_G0019904.1 mouse_genomes_project 13 138527 189878 - MGP_CBAJ_P0035797 Fam208b protein_coding protein_coding MGP_CBAJ_T0012735.1 MGP_CBAJ_G0010847.1 mouse_genomes_project 13 24947021 24947884 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006549.1 MGP_CBAJ_G0005418.1 mouse_genomes_project 13 125365232 125459124 + 4930544M13Rik lincRNA lincRNA MGP_CBAJ_T0006550.1 MGP_CBAJ_G0005418.1 mouse_genomes_project 13 125365232 125413998 + 4930544M13Rik lincRNA lincRNA MGP_CBAJ_T0036355.1 MGP_CBAJ_G0020161.1 mouse_genomes_project 13 35301580 35326252 - MGP_CBAJ_P0036355 Pxdc1 protein_coding protein_coding MGP_CBAJ_T0036356.1 MGP_CBAJ_G0020161.1 mouse_genomes_project 13 35301580 35326262 - MGP_CBAJ_P0036356 Pxdc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036357.1 MGP_CBAJ_G0020161.1 mouse_genomes_project 13 35301581 35326262 - MGP_CBAJ_P0036357 Pxdc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0036358.1 MGP_CBAJ_G0020161.1 mouse_genomes_project 13 35302625 35322148 - MGP_CBAJ_P0036358 Pxdc1 protein_coding protein_coding MGP_CBAJ_T0035923.1 MGP_CBAJ_G0019949.1 mouse_genomes_project 13 11670454 11694531 + Gng4 protein_coding processed_transcript MGP_CBAJ_T0035924.1 MGP_CBAJ_G0019949.1 mouse_genomes_project 13 11670724 11719202 + MGP_CBAJ_P0035924 Gng4 protein_coding protein_coding MGP_CBAJ_T0006475.1 MGP_CBAJ_G0005367.1 mouse_genomes_project 13 54846207 54851351 + Gm26651 lincRNA lincRNA MGP_CBAJ_T0006459.1 MGP_CBAJ_G0005355.1 mouse_genomes_project 13 40211401 40217082 + 5033403F01Rik lincRNA lincRNA MGP_CBAJ_T0035848.1 MGP_CBAJ_G0019926.1 mouse_genomes_project 13 5036311 5042087 - MGP_CBAJ_P0035848 protein_coding protein_coding MGP_CBAJ_T0100060.1 MGP_CBAJ_G0038315.1 mouse_genomes_project 13 52235302 52235424 + Gm23482 snoRNA snoRNA MGP_CBAJ_T0036086.1 MGP_CBAJ_G0020026.1 mouse_genomes_project 13 21209495 21210398 + MGP_CBAJ_P0036086 Vmn1r201 protein_coding protein_coding MGP_CBAJ_T0101600.1 MGP_CBAJ_G0039631.1 mouse_genomes_project 13 21678074 21679114 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0098810.1 MGP_CBAJ_G0037065.1 mouse_genomes_project 13 59773943 59774047 - Gm24716 snRNA snRNA MGP_CBAJ_T0098800.1 MGP_CBAJ_G0037055.1 mouse_genomes_project 13 33159706 33159815 + Gm27342 snRNA snRNA MGP_CBAJ_T0035962.1 MGP_CBAJ_G0019961.1 mouse_genomes_project 13 15027398 15940268 - MGP_CBAJ_P0035962 Sugct protein_coding protein_coding MGP_CBAJ_T0037127.1 MGP_CBAJ_G0020427.1 mouse_genomes_project 13 72946385 72958431 + MGP_CBAJ_P0037127 Zfp493 protein_coding protein_coding MGP_CBAJ_T0037128.1 MGP_CBAJ_G0020427.1 mouse_genomes_project 13 72946385 72955670 + MGP_CBAJ_P0037128 Zfp493 protein_coding protein_coding MGP_CBAJ_T0037129.1 MGP_CBAJ_G0020427.1 mouse_genomes_project 13 72952548 72956512 + Zfp493 protein_coding retained_intron MGP_CBAJ_T0037047.1 MGP_CBAJ_G0020384.1 mouse_genomes_project 13 68936658 68960449 - MGP_CBAJ_P0037047 Aaed1 protein_coding protein_coding MGP_CBAJ_T0037577.1 MGP_CBAJ_G0020577.1 mouse_genomes_project 13 108246118 108270836 - MGP_CBAJ_P0037577 Ptcd2 protein_coding protein_coding MGP_CBAJ_T0036297.1 MGP_CBAJ_G0020136.1 mouse_genomes_project 13 33214713 33215106 - MGP_CBAJ_P0036297 D930007J09Rik protein_coding protein_coding MGP_CBAJ_T0006474.1 MGP_CBAJ_G0005366.1 mouse_genomes_project 13 51416180 51421251 + Fam120aos lincRNA lincRNA MGP_CBAJ_T0036347.1 MGP_CBAJ_G0020158.1 mouse_genomes_project 13 34763428 34765666 - MGP_CBAJ_P0036347 unknown_likely_coding unknown_likely_coding MGP_CBAJ_T0101615.1 MGP_CBAJ_G0039646.1 mouse_genomes_project 13 27304184 27311783 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0036115.1 MGP_CBAJ_G0020049.1 mouse_genomes_project 13 22554205 22570838 + MGP_CBAJ_P0036115 Hist1h3e protein_coding protein_coding MGP_CBAJ_T0037797.1 MGP_CBAJ_G0020637.1 mouse_genomes_project 13 123020404 123041789 + MGP_CBAJ_P0037797 Il6st protein_coding protein_coding MGP_CBAJ_T0037798.1 MGP_CBAJ_G0020637.1 mouse_genomes_project 13 123020440 123062552 + MGP_CBAJ_P0037798 Il6st protein_coding protein_coding MGP_CBAJ_T0037799.1 MGP_CBAJ_G0020637.1 mouse_genomes_project 13 123020533 123062652 + MGP_CBAJ_P0037799 Il6st protein_coding nonsense_mediated_decay MGP_CBAJ_T0037800.1 MGP_CBAJ_G0020637.1 mouse_genomes_project 13 123023884 123036263 + MGP_CBAJ_P0037800 Il6st protein_coding protein_coding MGP_CBAJ_T0037801.1 MGP_CBAJ_G0020637.1 mouse_genomes_project 13 123031285 123062552 + MGP_CBAJ_P0037801 Il6st protein_coding protein_coding MGP_CBAJ_T0037802.1 MGP_CBAJ_G0020637.1 mouse_genomes_project 13 123031285 123061866 + MGP_CBAJ_P0037802 Il6st protein_coding protein_coding MGP_CBAJ_T0037803.1 MGP_CBAJ_G0020637.1 mouse_genomes_project 13 123031285 123061866 + MGP_CBAJ_P0037803 Il6st protein_coding protein_coding MGP_CBAJ_T0036669.1 MGP_CBAJ_G0020272.1 mouse_genomes_project 13 56543100 56543457 + MGP_CBAJ_P0036669 Gm5449 protein_coding protein_coding MGP_CBAJ_T0006437.1 MGP_CBAJ_G0005339.1 mouse_genomes_project 13 31406707 31414699 - 4930401O12Rik lincRNA lincRNA MGP_CBAJ_T0036445.1 MGP_CBAJ_G0020198.1 mouse_genomes_project 13 42774788 42774963 - MGP_CBAJ_P0036445 Gm17364 protein_coding protein_coding MGP_CBAJ_T0036642.1 MGP_CBAJ_G0020264.1 mouse_genomes_project 13 54713745 54715536 + MGP_CBAJ_P0036642 Gadd45g protein_coding protein_coding MGP_CBAJ_T0036643.1 MGP_CBAJ_G0020264.1 mouse_genomes_project 13 54713811 54715292 + Gadd45g protein_coding retained_intron MGP_CBAJ_T0036975.1 MGP_CBAJ_G0020356.1 mouse_genomes_project 13 64513722 64687585 + MGP_CBAJ_P0036975 Dapk1 protein_coding protein_coding MGP_CBAJ_T0036976.1 MGP_CBAJ_G0020356.1 mouse_genomes_project 13 64513986 64687585 + MGP_CBAJ_P0036976 Dapk1 protein_coding protein_coding MGP_CBAJ_T0036501.1 MGP_CBAJ_G0020217.1 mouse_genomes_project 13 47327023 47351328 + MGP_CBAJ_P0036501 Mylip protein_coding protein_coding MGP_CBAJ_T0036195.1 MGP_CBAJ_G0020087.1 mouse_genomes_project 13 24010019 24022226 + MGP_CBAJ_P0036195 Tdp2 protein_coding protein_coding MGP_CBAJ_T0036196.1 MGP_CBAJ_G0020087.1 mouse_genomes_project 13 24010162 24017266 + Tdp2 protein_coding processed_transcript MGP_CBAJ_T0036050.1 MGP_CBAJ_G0020002.1 mouse_genomes_project 13 20336760 20338077 - MGP_CBAJ_P0036050 Hist1h2bg protein_coding protein_coding MGP_CBAJ_T0036585.1 MGP_CBAJ_G0020245.1 mouse_genomes_project 13 51912232 51960803 + MGP_CBAJ_P0036585 Ippk protein_coding protein_coding MGP_CBAJ_T0035917.1 MGP_CBAJ_G0019943.1 mouse_genomes_project 13 10019018 10114032 + MGP_CBAJ_P0035917 Ero1lb protein_coding protein_coding MGP_CBAJ_T0012782.1 MGP_CBAJ_G0010894.1 mouse_genomes_project 13 91295870 91296835 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0037545.1 MGP_CBAJ_G0020562.1 mouse_genomes_project 13 105817570 105846423 - MGP_CBAJ_P0037545 Hexb protein_coding protein_coding MGP_CBAJ_T0098797.1 MGP_CBAJ_G0037052.1 mouse_genomes_project 13 23612302 23612405 - Gm22013 snRNA snRNA MGP_CBAJ_T0012758.1 MGP_CBAJ_G0010870.1 mouse_genomes_project 13 58056295 58056551 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0036011.1 MGP_CBAJ_G0019981.1 mouse_genomes_project 13 19919621 19920676 + MGP_CBAJ_P0036011 Olfr1367 protein_coding protein_coding MGP_CBAJ_T0036155.1 MGP_CBAJ_G0020079.1 mouse_genomes_project 13 23023726 23024116 + MGP_CBAJ_P0036155 Hist1h2aa protein_coding protein_coding MGP_CBAJ_T0101034.1 MGP_CBAJ_G0039266.1 mouse_genomes_project 13 23738270 23745535 - transcribed_processed_pseudogene retained_intron MGP_CBAJ_T0101035.1 MGP_CBAJ_G0039266.1 mouse_genomes_project 13 23739006 23739710 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101036.1 MGP_CBAJ_G0039266.1 mouse_genomes_project 13 23739450 23745365 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101037.1 MGP_CBAJ_G0039266.1 mouse_genomes_project 13 23739547 23745306 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0035909.1 MGP_CBAJ_G0019940.1 mouse_genomes_project 13 9833610 9878562 + MGP_CBAJ_P0035909 Heatr1 protein_coding protein_coding MGP_CBAJ_T0036582.1 MGP_CBAJ_G0020244.1 mouse_genomes_project 13 51823240 51873174 + MGP_CBAJ_P0036582 Bicd2 protein_coding protein_coding MGP_CBAJ_T0036583.1 MGP_CBAJ_G0020244.1 mouse_genomes_project 13 51823240 51873174 + MGP_CBAJ_P0036583 Bicd2 protein_coding protein_coding MGP_CBAJ_T0036584.1 MGP_CBAJ_G0020244.1 mouse_genomes_project 13 51823240 51873174 + MGP_CBAJ_P0036584 Bicd2 protein_coding protein_coding MGP_CBAJ_T0000867.1 MGP_CBAJ_G0000802.1 mouse_genomes_project 13 122737577 122738852 + TEC TEC MGP_CBAJ_T0036900.1 MGP_CBAJ_G0020342.1 mouse_genomes_project 13 62057645 62075226 - MGP_CBAJ_P0036900 Hnrnpk protein_coding protein_coding MGP_CBAJ_T0036901.1 MGP_CBAJ_G0020342.1 mouse_genomes_project 13 62057742 62074385 - MGP_CBAJ_P0036901 Hnrnpk protein_coding protein_coding MGP_CBAJ_T0036902.1 MGP_CBAJ_G0020342.1 mouse_genomes_project 13 62057742 62074347 - MGP_CBAJ_P0036902 Hnrnpk protein_coding protein_coding MGP_CBAJ_T0036903.1 MGP_CBAJ_G0020342.1 mouse_genomes_project 13 62057742 62069938 - MGP_CBAJ_P0036903 Hnrnpk protein_coding protein_coding MGP_CBAJ_T0036904.1 MGP_CBAJ_G0020342.1 mouse_genomes_project 13 62057840 62074532 - MGP_CBAJ_P0036904 Hnrnpk protein_coding protein_coding MGP_CBAJ_T0036905.1 MGP_CBAJ_G0020342.1 mouse_genomes_project 13 62058463 62066657 - Hnrnpk protein_coding retained_intron MGP_CBAJ_T0036906.1 MGP_CBAJ_G0020342.1 mouse_genomes_project 13 62064314 62068901 - MGP_CBAJ_P0036906 Hnrnpk protein_coding unknown_likely_coding MGP_CBAJ_T0036907.1 MGP_CBAJ_G0020342.1 mouse_genomes_project 13 62066219 62074025 - MGP_CBAJ_P0036907 Hnrnpk protein_coding protein_coding MGP_CBAJ_T0036908.1 MGP_CBAJ_G0020342.1 mouse_genomes_project 13 62066411 62067603 - Hnrnpk protein_coding retained_intron MGP_CBAJ_T0036909.1 MGP_CBAJ_G0020342.1 mouse_genomes_project 13 62066474 62068948 - Hnrnpk protein_coding retained_intron MGP_CBAJ_T0036910.1 MGP_CBAJ_G0020342.1 mouse_genomes_project 13 62066532 62073986 - MGP_CBAJ_P0036910 Hnrnpk protein_coding protein_coding MGP_CBAJ_T0036911.1 MGP_CBAJ_G0020342.1 mouse_genomes_project 13 62066561 62068829 - Hnrnpk protein_coding retained_intron MGP_CBAJ_T0036912.1 MGP_CBAJ_G0020342.1 mouse_genomes_project 13 62067036 62074370 - MGP_CBAJ_P0036912 Hnrnpk protein_coding protein_coding MGP_CBAJ_T0036913.1 MGP_CBAJ_G0020342.1 mouse_genomes_project 13 62067066 62074390 - MGP_CBAJ_P0036913 Hnrnpk protein_coding protein_coding MGP_CBAJ_T0036914.1 MGP_CBAJ_G0020342.1 mouse_genomes_project 13 62067136 62069900 - Hnrnpk protein_coding retained_intron MGP_CBAJ_T0036915.1 MGP_CBAJ_G0020342.1 mouse_genomes_project 13 62067141 62069900 - MGP_CBAJ_P0036915 Hnrnpk protein_coding protein_coding MGP_CBAJ_T0036916.1 MGP_CBAJ_G0020342.1 mouse_genomes_project 13 62067771 62073993 - Hnrnpk protein_coding retained_intron MGP_CBAJ_T0036917.1 MGP_CBAJ_G0020342.1 mouse_genomes_project 13 62068919 62073999 - MGP_CBAJ_P0036917 Hnrnpk protein_coding protein_coding MGP_CBAJ_T0036918.1 MGP_CBAJ_G0020342.1 mouse_genomes_project 13 62070608 62074385 - Hnrnpk protein_coding retained_intron MGP_CBAJ_T0036423.1 MGP_CBAJ_G0020188.1 mouse_genomes_project 13 42113904 42117811 + MGP_CBAJ_P0036423 Gm9979 protein_coding protein_coding MGP_CBAJ_T0012790.1 MGP_CBAJ_G0010902.1 mouse_genomes_project 13 109950520 109950829 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0037187.1 MGP_CBAJ_G0020456.1 mouse_genomes_project 13 79469452 79493310 - MGP_CBAJ_P0037187 Slc6a19 protein_coding protein_coding MGP_CBAJ_T0037188.1 MGP_CBAJ_G0020456.1 mouse_genomes_project 13 79469454 79493225 - Slc6a19 protein_coding retained_intron MGP_CBAJ_T0037189.1 MGP_CBAJ_G0020456.1 mouse_genomes_project 13 79469454 79482341 - Slc6a19 protein_coding processed_transcript MGP_CBAJ_T0037190.1 MGP_CBAJ_G0020456.1 mouse_genomes_project 13 79478794 79497395 - Slc6a19 protein_coding processed_transcript MGP_CBAJ_T0037191.1 MGP_CBAJ_G0020456.1 mouse_genomes_project 13 79479277 79482084 - Slc6a19 protein_coding processed_transcript MGP_CBAJ_T0037192.1 MGP_CBAJ_G0020456.1 mouse_genomes_project 13 79479445 79493211 - MGP_CBAJ_P0037192 Slc6a19 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037193.1 MGP_CBAJ_G0020456.1 mouse_genomes_project 13 79479483 79481962 - Slc6a19 protein_coding processed_transcript MGP_CBAJ_T0012773.1 MGP_CBAJ_G0010885.1 mouse_genomes_project 13 79624830 79625274 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0036966.1 MGP_CBAJ_G0020351.1 mouse_genomes_project 13 63565260 63569340 - MGP_CBAJ_P0036966 1700014D04Rik protein_coding protein_coding MGP_CBAJ_T0036967.1 MGP_CBAJ_G0020351.1 mouse_genomes_project 13 63566374 63567169 - MGP_CBAJ_P0036967 1700014D04Rik protein_coding protein_coding MGP_CBAJ_T0036968.1 MGP_CBAJ_G0020351.1 mouse_genomes_project 13 63568125 63571178 - MGP_CBAJ_P0036968 1700014D04Rik protein_coding protein_coding MGP_CBAJ_T0017083.1 MGP_CBAJ_G0014984.1 mouse_genomes_project 13 13482855 13505996 - Gm6556 processed_transcript antisense MGP_CBAJ_T0017084.1 MGP_CBAJ_G0014984.1 mouse_genomes_project 13 13505142 13507059 - Gm6556 processed_transcript TEC MGP_CBAJ_T0037690.1 MGP_CBAJ_G0020607.1 mouse_genomes_project 13 113714110 113740349 + MGP_CBAJ_P0037690 Trim23 protein_coding protein_coding MGP_CBAJ_T0037691.1 MGP_CBAJ_G0020607.1 mouse_genomes_project 13 113714152 113740704 + MGP_CBAJ_P0037691 Trim23 protein_coding protein_coding MGP_CBAJ_T0037692.1 MGP_CBAJ_G0020607.1 mouse_genomes_project 13 113714174 113725016 + MGP_CBAJ_P0037692 Trim23 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037693.1 MGP_CBAJ_G0020607.1 mouse_genomes_project 13 113714411 113739387 + MGP_CBAJ_P0037693 Trim23 protein_coding protein_coding MGP_CBAJ_T0006539.1 MGP_CBAJ_G0005410.1 mouse_genomes_project 13 117624084 117628861 + 1700006H21Rik lincRNA lincRNA MGP_CBAJ_T0006540.1 MGP_CBAJ_G0005410.1 mouse_genomes_project 13 117624084 117628872 + 1700006H21Rik lincRNA lincRNA MGP_CBAJ_T0036509.1 MGP_CBAJ_G0020221.1 mouse_genomes_project 13 48364179 48392037 + MGP_CBAJ_P0036509 Stmnd1 protein_coding protein_coding MGP_CBAJ_T0037245.1 MGP_CBAJ_G0020481.1 mouse_genomes_project 13 82183254 82185404 - MGP_CBAJ_P0037245 Gpr150 protein_coding protein_coding MGP_CBAJ_T0037035.1 MGP_CBAJ_G0020379.1 mouse_genomes_project 13 68689804 68720610 - MGP_CBAJ_P0037035 Hsd17b3 protein_coding protein_coding MGP_CBAJ_T0037036.1 MGP_CBAJ_G0020379.1 mouse_genomes_project 13 68689804 68720625 - MGP_CBAJ_P0037036 Hsd17b3 protein_coding protein_coding MGP_CBAJ_T0036250.1 MGP_CBAJ_G0020114.1 mouse_genomes_project 13 27540290 27556546 + MGP_CBAJ_P0036250 protein_coding protein_coding MGP_CBAJ_T0003415.1 MGP_CBAJ_G0003120.1 mouse_genomes_project 13 99813058 99813671 + 1700119I11Rik antisense antisense MGP_CBAJ_T0003416.1 MGP_CBAJ_G0003120.1 mouse_genomes_project 13 99813111 99813665 + 1700119I11Rik antisense antisense MGP_CBAJ_T0036206.1 MGP_CBAJ_G0020091.1 mouse_genomes_project 13 24183442 24214479 - MGP_CBAJ_P0036206 Mrs2 protein_coding protein_coding MGP_CBAJ_T0036511.1 MGP_CBAJ_G0020223.1 mouse_genomes_project 13 48607488 48756841 + MGP_CBAJ_P0036511 Cap2 protein_coding protein_coding MGP_CBAJ_T0036512.1 MGP_CBAJ_G0020223.1 mouse_genomes_project 13 48745099 48753112 + Cap2 protein_coding processed_transcript MGP_CBAJ_T0036158.1 MGP_CBAJ_G0020081.1 mouse_genomes_project 13 23103721 23199957 - MGP_CBAJ_P0036158 Lrrc16a protein_coding nonsense_mediated_decay MGP_CBAJ_T0036159.1 MGP_CBAJ_G0020081.1 mouse_genomes_project 13 23103854 23379856 - MGP_CBAJ_P0036159 Lrrc16a protein_coding unknown_likely_coding MGP_CBAJ_T0036160.1 MGP_CBAJ_G0020081.1 mouse_genomes_project 13 23103861 23113934 - MGP_CBAJ_P0036160 Lrrc16a protein_coding protein_coding MGP_CBAJ_T0036161.1 MGP_CBAJ_G0020081.1 mouse_genomes_project 13 23104036 23380054 - MGP_CBAJ_P0036161 Lrrc16a protein_coding protein_coding MGP_CBAJ_T0036162.1 MGP_CBAJ_G0020081.1 mouse_genomes_project 13 23104438 23379972 - MGP_CBAJ_P0036162 Lrrc16a protein_coding protein_coding MGP_CBAJ_T0036163.1 MGP_CBAJ_G0020081.1 mouse_genomes_project 13 23123273 23146113 - Lrrc16a protein_coding processed_transcript MGP_CBAJ_T0036164.1 MGP_CBAJ_G0020081.1 mouse_genomes_project 13 23150213 23186291 - Lrrc16a protein_coding retained_intron MGP_CBAJ_T0036165.1 MGP_CBAJ_G0020081.1 mouse_genomes_project 13 23199932 23204195 - Lrrc16a protein_coding processed_transcript MGP_CBAJ_T0036166.1 MGP_CBAJ_G0020081.1 mouse_genomes_project 13 23232700 23380039 - Lrrc16a protein_coding retained_intron MGP_CBAJ_T0036167.1 MGP_CBAJ_G0020081.1 mouse_genomes_project 13 23234232 23250109 - Lrrc16a protein_coding processed_transcript MGP_CBAJ_T0036168.1 MGP_CBAJ_G0020081.1 mouse_genomes_project 13 23250336 23379742 - MGP_CBAJ_P0036168 Lrrc16a protein_coding protein_coding MGP_CBAJ_T0036169.1 MGP_CBAJ_G0020081.1 mouse_genomes_project 13 23259641 23303211 - MGP_CBAJ_P0036169 Lrrc16a protein_coding protein_coding MGP_CBAJ_T0036170.1 MGP_CBAJ_G0020081.1 mouse_genomes_project 13 23270137 23335406 - Lrrc16a protein_coding processed_transcript MGP_CBAJ_T0036087.1 MGP_CBAJ_G0020027.1 mouse_genomes_project 13 21244574 21245483 - MGP_CBAJ_P0036087 Vmn1r202 protein_coding protein_coding MGP_CBAJ_T0011231.1 MGP_CBAJ_G0009369.1 mouse_genomes_project 13 60193410 60193535 + Gm27834 misc_RNA misc_RNA MGP_CBAJ_T0036592.1 MGP_CBAJ_G0020251.1 mouse_genomes_project 13 52177010 52202686 + MGP_CBAJ_P0036592 Nol8 protein_coding protein_coding MGP_CBAJ_T0012798.1 MGP_CBAJ_G0010910.1 mouse_genomes_project 13 122342554 122344339 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009823.1 MGP_CBAJ_G0007961.1 mouse_genomes_project 13 67244542 67244625 + Gm24588 miRNA miRNA MGP_CBAJ_T0006489.1 MGP_CBAJ_G0005374.1 mouse_genomes_project 13 59210152 59210885 - Gm28760 lincRNA lincRNA MGP_CBAJ_T0006490.1 MGP_CBAJ_G0005374.1 mouse_genomes_project 13 59210152 59210888 - Gm28760 lincRNA lincRNA MGP_CBAJ_T0036273.1 MGP_CBAJ_G0020123.1 mouse_genomes_project 13 30644929 30650643 - MGP_CBAJ_P0036273 Uqcrfs1 protein_coding protein_coding MGP_CBAJ_T0012710.1 MGP_CBAJ_G0010822.1 mouse_genomes_project 13 19869151 19869622 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0036009.1 MGP_CBAJ_G0019980.1 mouse_genomes_project 13 19886153 19893541 + MGP_CBAJ_P0036009 Gpx6 protein_coding protein_coding MGP_CBAJ_T0036010.1 MGP_CBAJ_G0019980.1 mouse_genomes_project 13 19891180 19893545 + Gpx6 protein_coding processed_transcript MGP_CBAJ_T0037491.1 MGP_CBAJ_G0020542.1 mouse_genomes_project 13 103709787 103734456 - MGP_CBAJ_P0037491 Aggf1 protein_coding protein_coding MGP_CBAJ_T0037492.1 MGP_CBAJ_G0020542.1 mouse_genomes_project 13 103712606 103734438 - Aggf1 protein_coding processed_transcript MGP_CBAJ_T0037650.1 MGP_CBAJ_G0020600.1 mouse_genomes_project 13 112116919 112136559 + MGP_CBAJ_P0037650 Cd180 protein_coding protein_coding MGP_CBAJ_T0037651.1 MGP_CBAJ_G0020600.1 mouse_genomes_project 13 112116926 112130903 + MGP_CBAJ_P0037651 Cd180 protein_coding protein_coding MGP_CBAJ_T0037652.1 MGP_CBAJ_G0020600.1 mouse_genomes_project 13 112116934 112131709 + MGP_CBAJ_P0037652 Cd180 protein_coding protein_coding MGP_CBAJ_T0037653.1 MGP_CBAJ_G0020600.1 mouse_genomes_project 13 112116940 112172690 + MGP_CBAJ_P0037653 Cd180 protein_coding protein_coding MGP_CBAJ_T0037654.1 MGP_CBAJ_G0020600.1 mouse_genomes_project 13 112116972 112172565 + MGP_CBAJ_P0037654 Cd180 protein_coding protein_coding MGP_CBAJ_T0036792.1 MGP_CBAJ_G0020299.1 mouse_genomes_project 13 58604160 58607501 + MGP_CBAJ_P0036792 Prelid1 protein_coding protein_coding MGP_CBAJ_T0012761.1 MGP_CBAJ_G0010873.1 mouse_genomes_project 13 67997563 67997899 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009805.1 MGP_CBAJ_G0007943.1 mouse_genomes_project 13 31859354 31859452 - Gm27516 miRNA miRNA MGP_CBAJ_T0037564.1 MGP_CBAJ_G0020570.1 mouse_genomes_project 13 107316039 107318697 - MGP_CBAJ_P0037564 Gm10320 protein_coding protein_coding MGP_CBAJ_T0036870.1 MGP_CBAJ_G0020332.1 mouse_genomes_project 13 60190091 60224688 + MGP_CBAJ_P0036870 Smad5 protein_coding protein_coding MGP_CBAJ_T0036871.1 MGP_CBAJ_G0020332.1 mouse_genomes_project 13 60190120 60215539 + Smad5 protein_coding processed_transcript MGP_CBAJ_T0036872.1 MGP_CBAJ_G0020332.1 mouse_genomes_project 13 60190133 60222271 + MGP_CBAJ_P0036872 Smad5 protein_coding protein_coding MGP_CBAJ_T0036873.1 MGP_CBAJ_G0020332.1 mouse_genomes_project 13 60190147 60215450 + Smad5 protein_coding processed_transcript MGP_CBAJ_T0036874.1 MGP_CBAJ_G0020332.1 mouse_genomes_project 13 60193205 60222615 + MGP_CBAJ_P0036874 Smad5 protein_coding protein_coding MGP_CBAJ_T0036875.1 MGP_CBAJ_G0020332.1 mouse_genomes_project 13 60215341 60221306 + Smad5 protein_coding processed_transcript MGP_CBAJ_T0036116.1 MGP_CBAJ_G0020050.1 mouse_genomes_project 13 22568430 22568986 - MGP_CBAJ_P0036116 Hist1h2bh protein_coding protein_coding MGP_CBAJ_T0037093.1 MGP_CBAJ_G0020408.1 mouse_genomes_project 13 72149047 72160919 + MGP_CBAJ_P0037093 protein_coding protein_coding MGP_CBAJ_T0100066.1 MGP_CBAJ_G0038321.1 mouse_genomes_project 13 75686463 75686591 + Gm26018 snoRNA snoRNA MGP_CBAJ_T0011219.1 MGP_CBAJ_G0009357.1 mouse_genomes_project 13 10164018 10164315 + Gm23081 misc_RNA misc_RNA MGP_CBAJ_T0036140.1 MGP_CBAJ_G0020070.1 mouse_genomes_project 13 22838926 22842104 - MGP_CBAJ_P0036140 Hist1h4a protein_coding protein_coding MGP_CBAJ_T0012765.1 MGP_CBAJ_G0010877.1 mouse_genomes_project 13 72488943 72489643 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100078.1 MGP_CBAJ_G0038333.1 mouse_genomes_project 13 103689411 103689549 + Snora47 snoRNA snoRNA MGP_CBAJ_T0036862.1 MGP_CBAJ_G0020327.1 mouse_genomes_project 13 59892042 59935416 + MGP_CBAJ_P0036862 Slc25a48 protein_coding protein_coding MGP_CBAJ_T0037642.1 MGP_CBAJ_G0020598.1 mouse_genomes_project 13 109985270 110018568 - MGP_CBAJ_P0037642 Slc30a5 protein_coding protein_coding MGP_CBAJ_T0000857.1 MGP_CBAJ_G0000792.1 mouse_genomes_project 13 98152879 98153773 - TEC TEC MGP_CBAJ_T0009830.1 MGP_CBAJ_G0007968.1 mouse_genomes_project 13 90608866 90608938 + Mir9-2 miRNA miRNA MGP_CBAJ_T0037579.1 MGP_CBAJ_G0020579.1 mouse_genomes_project 13 108357137 108457104 - MGP_CBAJ_P0037579 Map1b protein_coding protein_coding MGP_CBAJ_T0006533.1 MGP_CBAJ_G0005404.1 mouse_genomes_project 13 108026627 108035184 + Gm807 lincRNA lincRNA MGP_CBAJ_T0012739.1 MGP_CBAJ_G0010851.1 mouse_genomes_project 13 26866037 26866378 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012741.1 MGP_CBAJ_G0010853.1 mouse_genomes_project 13 28371272 28371761 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0036796.1 MGP_CBAJ_G0020301.1 mouse_genomes_project 13 58629001 58655451 - MGP_CBAJ_P0036796 Lman2 protein_coding protein_coding MGP_CBAJ_T0037060.1 MGP_CBAJ_G0020394.1 mouse_genomes_project 13 69867454 69868381 + MGP_CBAJ_P0037060 Olfr466 protein_coding protein_coding MGP_CBAJ_T0036448.1 MGP_CBAJ_G0020200.1 mouse_genomes_project 13 43144332 43181440 + MGP_CBAJ_P0036448 Tmem170b protein_coding protein_coding MGP_CBAJ_T0037107.1 MGP_CBAJ_G0020419.1 mouse_genomes_project 13 72524737 72561812 - MGP_CBAJ_P0037107 Gm26965 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037547.1 MGP_CBAJ_G0020564.1 mouse_genomes_project 13 106680622 107017879 - MGP_CBAJ_P0037547 Arhgef28 protein_coding protein_coding MGP_CBAJ_T0003418.1 MGP_CBAJ_G0003122.1 mouse_genomes_project 13 101766299 101769962 + Gm15622 antisense antisense MGP_CBAJ_T0006554.1 MGP_CBAJ_G0005420.1 mouse_genomes_project 13 131048765 131050273 + 1700074H08Rik lincRNA lincRNA MGP_CBAJ_T0036122.1 MGP_CBAJ_G0020056.1 mouse_genomes_project 13 22620901 22621294 + MGP_CBAJ_P0036122 Hist1h4d protein_coding protein_coding MGP_CBAJ_T0036629.1 MGP_CBAJ_G0020263.1 mouse_genomes_project 13 54528851 54648263 - MGP_CBAJ_P0036629 Sema4d protein_coding protein_coding MGP_CBAJ_T0036630.1 MGP_CBAJ_G0020263.1 mouse_genomes_project 13 54528851 54648337 - MGP_CBAJ_P0036630 Sema4d protein_coding protein_coding MGP_CBAJ_T0036631.1 MGP_CBAJ_G0020263.1 mouse_genomes_project 13 54528855 54586927 - MGP_CBAJ_P0036631 Sema4d protein_coding protein_coding MGP_CBAJ_T0036632.1 MGP_CBAJ_G0020263.1 mouse_genomes_project 13 54542074 54549083 - Sema4d protein_coding retained_intron MGP_CBAJ_T0036633.1 MGP_CBAJ_G0020263.1 mouse_genomes_project 13 54564474 54603869 - Sema4d protein_coding processed_transcript MGP_CBAJ_T0036634.1 MGP_CBAJ_G0020263.1 mouse_genomes_project 13 54564474 54603765 - Sema4d protein_coding processed_transcript MGP_CBAJ_T0036635.1 MGP_CBAJ_G0020263.1 mouse_genomes_project 13 54566040 54607120 - Sema4d protein_coding processed_transcript MGP_CBAJ_T0036636.1 MGP_CBAJ_G0020263.1 mouse_genomes_project 13 54566087 54609512 - Sema4d protein_coding processed_transcript MGP_CBAJ_T0036637.1 MGP_CBAJ_G0020263.1 mouse_genomes_project 13 54566107 54611549 - Sema4d protein_coding processed_transcript MGP_CBAJ_T0036638.1 MGP_CBAJ_G0020263.1 mouse_genomes_project 13 54566130 54611415 - Sema4d protein_coding processed_transcript MGP_CBAJ_T0036639.1 MGP_CBAJ_G0020263.1 mouse_genomes_project 13 54566157 54603676 - Sema4d protein_coding processed_transcript MGP_CBAJ_T0036640.1 MGP_CBAJ_G0020263.1 mouse_genomes_project 13 54566206 54631855 - Sema4d protein_coding processed_transcript MGP_CBAJ_T0036641.1 MGP_CBAJ_G0020263.1 mouse_genomes_project 13 54566239 54648254 - Sema4d protein_coding processed_transcript MGP_CBAJ_T0037807.1 MGP_CBAJ_G0020640.1 mouse_genomes_project 13 123243933 123333257 + MGP_CBAJ_P0037807 Slc38a9 protein_coding protein_coding MGP_CBAJ_T0098818.1 MGP_CBAJ_G0037073.1 mouse_genomes_project 13 104551217 104551317 - Gm23955 snRNA snRNA MGP_CBAJ_T0036091.1 MGP_CBAJ_G0020031.1 mouse_genomes_project 13 21657150 21658071 - MGP_CBAJ_P0036091 Vmn1r210 protein_coding protein_coding MGP_CBAJ_T0003381.1 MGP_CBAJ_G0003104.1 mouse_genomes_project 13 57980129 57985830 - Gm16249 antisense antisense MGP_CBAJ_T0006510.1 MGP_CBAJ_G0005389.1 mouse_genomes_project 13 88462791 88467939 - Gm17259 lincRNA lincRNA MGP_CBAJ_T0037126.1 MGP_CBAJ_G0020426.1 mouse_genomes_project 13 72924296 72935321 - MGP_CBAJ_P0037126 Gm9894 protein_coding protein_coding MGP_CBAJ_T0035825.1 MGP_CBAJ_G0019919.1 mouse_genomes_project 13 1164794 1177261 + MGP_CBAJ_P0035825 Akr1c21 protein_coding protein_coding MGP_CBAJ_T0035826.1 MGP_CBAJ_G0019919.1 mouse_genomes_project 13 1167876 1172060 + Akr1c21 protein_coding retained_intron MGP_CBAJ_T0037056.1 MGP_CBAJ_G0020392.1 mouse_genomes_project 13 69764311 69819521 - MGP_CBAJ_P0037056 Mfsd14b protein_coding protein_coding MGP_CBAJ_T0037057.1 MGP_CBAJ_G0020392.1 mouse_genomes_project 13 69764698 69819528 - MGP_CBAJ_P0037057 Mfsd14b protein_coding protein_coding MGP_CBAJ_T0037058.1 MGP_CBAJ_G0020392.1 mouse_genomes_project 13 69766223 69769463 - Mfsd14b protein_coding retained_intron MGP_CBAJ_T0036860.1 MGP_CBAJ_G0020325.1 mouse_genomes_project 13 59711534 59719439 - MGP_CBAJ_P0036860 Cxcl14 protein_coding protein_coding MGP_CBAJ_T0011220.1 MGP_CBAJ_G0009358.1 mouse_genomes_project 13 11127288 11127552 + Gm24065 misc_RNA misc_RNA MGP_CBAJ_T0036021.1 MGP_CBAJ_G0019984.1 mouse_genomes_project 13 20015467 20038302 - MGP_CBAJ_P0036021 protein_coding protein_coding MGP_CBAJ_T0036022.1 MGP_CBAJ_G0019984.1 mouse_genomes_project 13 20015470 20038111 - MGP_CBAJ_P0036022 protein_coding protein_coding MGP_CBAJ_T0036023.1 MGP_CBAJ_G0019984.1 mouse_genomes_project 13 20016042 20038445 - MGP_CBAJ_P0036023 protein_coding protein_coding MGP_CBAJ_T0036024.1 MGP_CBAJ_G0019984.1 mouse_genomes_project 13 20016042 20038459 - MGP_CBAJ_P0036024 protein_coding protein_coding MGP_CBAJ_T0036025.1 MGP_CBAJ_G0019984.1 mouse_genomes_project 13 20017384 20038111 - MGP_CBAJ_P0036025 protein_coding protein_coding MGP_CBAJ_T0035812.1 MGP_CBAJ_G0019913.1 mouse_genomes_project 13 700154 718124 - MGP_CBAJ_P0035812 Akr1c18 protein_coding protein_coding MGP_CBAJ_T0035813.1 MGP_CBAJ_G0019913.1 mouse_genomes_project 13 700154 718150 - MGP_CBAJ_P0035813 Akr1c18 protein_coding protein_coding MGP_CBAJ_T0037194.1 MGP_CBAJ_G0020457.1 mouse_genomes_project 13 79558593 79611643 + MGP_CBAJ_P0037194 Slc12a7 protein_coding protein_coding MGP_CBAJ_T0037195.1 MGP_CBAJ_G0020457.1 mouse_genomes_project 13 79558663 79609834 + MGP_CBAJ_P0037195 Slc12a7 protein_coding unknown_likely_coding MGP_CBAJ_T0000868.1 MGP_CBAJ_G0000803.1 mouse_genomes_project 13 124945904 124957812 + TEC TEC MGP_CBAJ_T0037884.1 MGP_CBAJ_G0020679.1 mouse_genomes_project 13 131138207 131163815 - MGP_CBAJ_P0037884 Zfp131 protein_coding protein_coding MGP_CBAJ_T0037885.1 MGP_CBAJ_G0020679.1 mouse_genomes_project 13 131139370 131164367 - MGP_CBAJ_P0037885 Zfp131 protein_coding unknown_likely_coding MGP_CBAJ_T0036479.1 MGP_CBAJ_G0020212.1 mouse_genomes_project 13 45359136 45431389 + MGP_CBAJ_P0036479 Rnf182 protein_coding protein_coding MGP_CBAJ_T0036480.1 MGP_CBAJ_G0020212.1 mouse_genomes_project 13 45359409 45428514 + MGP_CBAJ_P0036480 Rnf182 protein_coding protein_coding MGP_CBAJ_T0035992.1 MGP_CBAJ_G0019972.1 mouse_genomes_project 13 18170119 18175656 - MGP_CBAJ_P0035992 A530099J19Rik protein_coding protein_coding MGP_CBAJ_T0006469.1 MGP_CBAJ_G0005362.1 mouse_genomes_project 13 50259078 50325693 - 4931429P17Rik lincRNA lincRNA MGP_CBAJ_T0003377.1 MGP_CBAJ_G0003100.1 mouse_genomes_project 13 44828201 44836180 - Gm15813 antisense antisense MGP_CBAJ_T0101587.1 MGP_CBAJ_G0039618.1 mouse_genomes_project 13 20769702 20770022 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0000862.1 MGP_CBAJ_G0000797.1 mouse_genomes_project 13 110063419 110066835 + TEC TEC MGP_CBAJ_T0012764.1 MGP_CBAJ_G0010876.1 mouse_genomes_project 13 69205263 69206639 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0017113.1 MGP_CBAJ_G0015003.1 mouse_genomes_project 13 130916506 130919475 - Gm9752 processed_transcript processed_transcript MGP_CBAJ_T0037295.1 MGP_CBAJ_G0020493.1 mouse_genomes_project 13 88351438 88395746 - MGP_CBAJ_P0037295 Polr3g protein_coding protein_coding MGP_CBAJ_T0037296.1 MGP_CBAJ_G0020493.1 mouse_genomes_project 13 88351475 88364823 - Polr3g protein_coding retained_intron MGP_CBAJ_T0037297.1 MGP_CBAJ_G0020493.1 mouse_genomes_project 13 88373782 88395689 - MGP_CBAJ_P0037297 Polr3g protein_coding nonsense_mediated_decay MGP_CBAJ_T0037298.1 MGP_CBAJ_G0020493.1 mouse_genomes_project 13 88374219 88395678 - MGP_CBAJ_P0037298 Polr3g protein_coding protein_coding MGP_CBAJ_T0037299.1 MGP_CBAJ_G0020493.1 mouse_genomes_project 13 88384113 88395735 - Polr3g protein_coding retained_intron MGP_CBAJ_T0098824.1 MGP_CBAJ_G0037079.1 mouse_genomes_project 13 131188287 131188395 + Gm23308 snRNA snRNA MGP_CBAJ_T0037428.1 MGP_CBAJ_G0020521.1 mouse_genomes_project 13 100599243 100600845 - MGP_CBAJ_P0037428 Spz1 protein_coding protein_coding MGP_CBAJ_T0003389.1 MGP_CBAJ_G0003108.1 mouse_genomes_project 13 67874881 67884767 + Gm16133 antisense antisense MGP_CBAJ_T0003390.1 MGP_CBAJ_G0003108.1 mouse_genomes_project 13 67874954 67884764 + Gm16133 antisense antisense MGP_CBAJ_T0035883.1 MGP_CBAJ_G0019934.1 mouse_genomes_project 13 6415263 6838247 + MGP_CBAJ_P0035883 Dip2c protein_coding protein_coding MGP_CBAJ_T0035884.1 MGP_CBAJ_G0019934.1 mouse_genomes_project 13 6415668 6835497 + MGP_CBAJ_P0035884 Dip2c protein_coding protein_coding MGP_CBAJ_T0035885.1 MGP_CBAJ_G0019934.1 mouse_genomes_project 13 6415717 6835497 + MGP_CBAJ_P0035885 Dip2c protein_coding protein_coding MGP_CBAJ_T0037698.1 MGP_CBAJ_G0020611.1 mouse_genomes_project 13 114213997 114415376 - MGP_CBAJ_P0037698 Cwc27 protein_coding protein_coding MGP_CBAJ_T0037699.1 MGP_CBAJ_G0020611.1 mouse_genomes_project 13 114347495 114388926 - Cwc27 protein_coding processed_transcript MGP_CBAJ_T0037700.1 MGP_CBAJ_G0020611.1 mouse_genomes_project 13 114386790 114388961 - Cwc27 protein_coding processed_transcript MGP_CBAJ_T0037702.1 MGP_CBAJ_G0020611.1 mouse_genomes_project 13 114388809 114415545 - MGP_CBAJ_P0037702 Cwc27 protein_coding unknown_likely_coding MGP_CBAJ_T0037703.1 MGP_CBAJ_G0020611.1 mouse_genomes_project 13 114404084 114415565 - MGP_CBAJ_P0037703 Cwc27 protein_coding protein_coding MGP_CBAJ_T0036890.1 MGP_CBAJ_G0020335.1 mouse_genomes_project 13 61643322 61755442 - MGP_CBAJ_P0036890 Klhl3 protein_coding protein_coding MGP_CBAJ_T0036891.1 MGP_CBAJ_G0020335.1 mouse_genomes_project 13 61644060 61744279 - MGP_CBAJ_P0036891 Klhl3 protein_coding protein_coding MGP_CBAJ_T0011238.1 MGP_CBAJ_G0009376.1 mouse_genomes_project 13 118536882 118537077 - Gm28016 misc_RNA misc_RNA MGP_CBAJ_T0101622.1 MGP_CBAJ_G0039653.1 mouse_genomes_project 13 34273794 34276846 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0012780.1 MGP_CBAJ_G0010892.1 mouse_genomes_project 13 86642469 86643634 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097941.1 MGP_CBAJ_G0036214.1 mouse_genomes_project 13 55894699 55894811 - n-R5s54 rRNA rRNA MGP_CBAJ_T0003398.1 MGP_CBAJ_G0003112.1 mouse_genomes_project 13 72965760 73024945 - antisense antisense MGP_CBAJ_T0101619.1 MGP_CBAJ_G0039650.1 mouse_genomes_project 13 34094695 34118404 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0037300.1 MGP_CBAJ_G0020494.1 mouse_genomes_project 13 88396149 88437334 + MGP_CBAJ_P0037300 Mblac2 protein_coding protein_coding MGP_CBAJ_T0006441.1 MGP_CBAJ_G0005343.1 mouse_genomes_project 13 31558336 31577951 - G630018N14Rik lincRNA lincRNA MGP_CBAJ_T0006442.1 MGP_CBAJ_G0005343.1 mouse_genomes_project 13 31571282 31576579 - G630018N14Rik lincRNA lincRNA MGP_CBAJ_T0036544.1 MGP_CBAJ_G0020233.1 mouse_genomes_project 13 50852775 50880820 - MGP_CBAJ_P0036544 Zfp169 protein_coding protein_coding MGP_CBAJ_T0036545.1 MGP_CBAJ_G0020233.1 mouse_genomes_project 13 50852787 50880778 - MGP_CBAJ_P0036545 Zfp169 protein_coding protein_coding MGP_CBAJ_T0036546.1 MGP_CBAJ_G0020233.1 mouse_genomes_project 13 50854330 50874379 - MGP_CBAJ_P0036546 Zfp169 protein_coding protein_coding MGP_CBAJ_T0036547.1 MGP_CBAJ_G0020233.1 mouse_genomes_project 13 50854582 50874379 - MGP_CBAJ_P0036547 Zfp169 protein_coding protein_coding MGP_CBAJ_T0036548.1 MGP_CBAJ_G0020233.1 mouse_genomes_project 13 50856380 50880794 - MGP_CBAJ_P0036548 Zfp169 protein_coding protein_coding MGP_CBAJ_T0036549.1 MGP_CBAJ_G0020233.1 mouse_genomes_project 13 50856458 50880810 - MGP_CBAJ_P0036549 Zfp169 protein_coding protein_coding MGP_CBAJ_T0036550.1 MGP_CBAJ_G0020233.1 mouse_genomes_project 13 50861962 50880835 - Zfp169 protein_coding retained_intron MGP_CBAJ_T0036120.1 MGP_CBAJ_G0020054.1 mouse_genomes_project 13 22608025 22608488 + MGP_CBAJ_P0036120 Hist1h2bm protein_coding protein_coding MGP_CBAJ_T0036127.1 MGP_CBAJ_G0020059.1 mouse_genomes_project 13 22740368 22748871 - MGP_CBAJ_P0036127 protein_coding protein_coding MGP_CBAJ_T0012796.1 MGP_CBAJ_G0010908.1 mouse_genomes_project 13 121738547 121739020 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100079.1 MGP_CBAJ_G0038334.1 mouse_genomes_project 13 103691429 103691561 + Gm22661 snoRNA snoRNA MGP_CBAJ_T0036047.1 MGP_CBAJ_G0019999.1 mouse_genomes_project 13 20322688 20323653 + MGP_CBAJ_P0036047 protein_coding protein_coding MGP_CBAJ_T0101610.1 MGP_CBAJ_G0039641.1 mouse_genomes_project 13 22072328 22073220 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0037024.1 MGP_CBAJ_G0020378.1 mouse_genomes_project 13 68409573 68450506 + MGP_CBAJ_P0037024 Ercc6l2 protein_coding protein_coding MGP_CBAJ_T0037025.1 MGP_CBAJ_G0020378.1 mouse_genomes_project 13 68409635 68473922 + MGP_CBAJ_P0037025 Ercc6l2 protein_coding protein_coding MGP_CBAJ_T0037026.1 MGP_CBAJ_G0020378.1 mouse_genomes_project 13 68409667 68434387 + Ercc6l2 protein_coding processed_transcript MGP_CBAJ_T0037027.1 MGP_CBAJ_G0020378.1 mouse_genomes_project 13 68409667 68450471 + MGP_CBAJ_P0037027 Ercc6l2 protein_coding protein_coding MGP_CBAJ_T0037028.1 MGP_CBAJ_G0020378.1 mouse_genomes_project 13 68409667 68470944 + MGP_CBAJ_P0037028 Ercc6l2 protein_coding protein_coding MGP_CBAJ_T0037029.1 MGP_CBAJ_G0020378.1 mouse_genomes_project 13 68413877 68470589 + MGP_CBAJ_P0037029 Ercc6l2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037030.1 MGP_CBAJ_G0020378.1 mouse_genomes_project 13 68413879 68470965 + MGP_CBAJ_P0037030 Ercc6l2 protein_coding protein_coding MGP_CBAJ_T0037031.1 MGP_CBAJ_G0020378.1 mouse_genomes_project 13 68413879 68457314 + MGP_CBAJ_P0037031 Ercc6l2 protein_coding protein_coding MGP_CBAJ_T0037032.1 MGP_CBAJ_G0020378.1 mouse_genomes_project 13 68414202 68439054 + MGP_CBAJ_P0037032 Ercc6l2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0037033.1 MGP_CBAJ_G0020378.1 mouse_genomes_project 13 68471819 68473829 + Ercc6l2 protein_coding processed_transcript MGP_CBAJ_T0037034.1 MGP_CBAJ_G0020378.1 mouse_genomes_project 13 68473786 68506310 + MGP_CBAJ_P0037034 Ercc6l2 protein_coding protein_coding MGP_CBAJ_T0009810.1 MGP_CBAJ_G0007948.1 mouse_genomes_project 13 50909889 50909978 - Mirlet7f-1 miRNA miRNA MGP_CBAJ_T0000860.1 MGP_CBAJ_G0000795.1 mouse_genomes_project 13 107344751 107345272 - TEC TEC MGP_CBAJ_T0006527.1 MGP_CBAJ_G0005400.1 mouse_genomes_project 13 106444548 106460713 - 5330416C01Rik lincRNA lincRNA MGP_CBAJ_T0006528.1 MGP_CBAJ_G0005400.1 mouse_genomes_project 13 106446371 106456448 - 5330416C01Rik lincRNA lincRNA MGP_CBAJ_T0006529.1 MGP_CBAJ_G0005400.1 mouse_genomes_project 13 106457995 106460681 - 5330416C01Rik lincRNA lincRNA MGP_CBAJ_T0035871.1 MGP_CBAJ_G0019930.1 mouse_genomes_project 13 6053154 6062088 + MGP_CBAJ_P0035871 protein_coding protein_coding MGP_CBAJ_T0036434.1 MGP_CBAJ_G0020192.1 mouse_genomes_project 13 42502270 42508500 + MGP_CBAJ_P0036434 Tmem14c protein_coding protein_coding MGP_CBAJ_T0006537.1 MGP_CBAJ_G0005408.1 mouse_genomes_project 13 110659382 110729762 + lincRNA lincRNA MGP_CBAJ_T0037855.1 MGP_CBAJ_G0020666.1 mouse_genomes_project 13 128816139 129269194 + MGP_CBAJ_P0037855 Hcn1 protein_coding protein_coding MGP_CBAJ_T0012768.1 MGP_CBAJ_G0010880.1 mouse_genomes_project 13 72992809 72993635 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012795.1 MGP_CBAJ_G0010907.1 mouse_genomes_project 13 116352923 116353169 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006493.1 MGP_CBAJ_G0005377.1 mouse_genomes_project 13 63554926 63556492 + 4930528D03Rik lincRNA lincRNA MGP_CBAJ_T0006494.1 MGP_CBAJ_G0005377.1 mouse_genomes_project 13 63554931 63558792 + 4930528D03Rik lincRNA lincRNA MGP_CBAJ_T0012709.1 MGP_CBAJ_G0010821.1 mouse_genomes_project 13 19228685 19229685 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0036474.1 MGP_CBAJ_G0020207.1 mouse_genomes_project 13 44913252 45023646 - MGP_CBAJ_P0036474 Gfod1 protein_coding protein_coding MGP_CBAJ_T0037138.1 MGP_CBAJ_G0020434.1 mouse_genomes_project 13 73923142 73933193 + MGP_CBAJ_P0037138 Fastkd3 protein_coding protein_coding MGP_CBAJ_T0037139.1 MGP_CBAJ_G0020434.1 mouse_genomes_project 13 73923339 73933201 + MGP_CBAJ_P0037139 Fastkd3 protein_coding unknown_likely_coding MGP_CBAJ_T0036110.1 MGP_CBAJ_G0020046.1 mouse_genomes_project 13 22484684 22500585 - MGP_CBAJ_P0036110 Btn2a2 protein_coding protein_coding MGP_CBAJ_T0036111.1 MGP_CBAJ_G0020046.1 mouse_genomes_project 13 22484684 22500602 - MGP_CBAJ_P0036111 Btn2a2 protein_coding protein_coding MGP_CBAJ_T0036112.1 MGP_CBAJ_G0020046.1 mouse_genomes_project 13 22484896 22500592 - MGP_CBAJ_P0036112 Btn2a2 protein_coding protein_coding MGP_CBAJ_T0037196.1 MGP_CBAJ_G0020458.1 mouse_genomes_project 13 79613433 79645517 - MGP_CBAJ_P0037196 Nkd2 protein_coding protein_coding MGP_CBAJ_T0037197.1 MGP_CBAJ_G0020458.1 mouse_genomes_project 13 79614592 79645498 - MGP_CBAJ_P0037197 Nkd2 protein_coding protein_coding MGP_CBAJ_T0037198.1 MGP_CBAJ_G0020458.1 mouse_genomes_project 13 79618435 79645498 - Nkd2 protein_coding retained_intron MGP_CBAJ_T0036277.1 MGP_CBAJ_G0020125.1 mouse_genomes_project 13 30870141 30891309 + MGP_CBAJ_P0036277 Irf4 protein_coding protein_coding MGP_CBAJ_T0036278.1 MGP_CBAJ_G0020125.1 mouse_genomes_project 13 30870141 30891309 + MGP_CBAJ_P0036278 Irf4 protein_coding protein_coding MGP_CBAJ_T0036225.1 MGP_CBAJ_G0020101.1 mouse_genomes_project 13 26871956 26878582 + MGP_CBAJ_P0036225 Prl6a1 protein_coding protein_coding MGP_CBAJ_T0036226.1 MGP_CBAJ_G0020101.1 mouse_genomes_project 13 26873275 26878582 + MGP_CBAJ_P0036226 Prl6a1 protein_coding protein_coding MGP_CBAJ_T0012750.1 MGP_CBAJ_G0010862.1 mouse_genomes_project 13 33574317 33575124 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012719.1 MGP_CBAJ_G0010831.1 mouse_genomes_project 13 20997222 20998336 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0036138.1 MGP_CBAJ_G0020068.1 mouse_genomes_project 13 22827271 22827705 + MGP_CBAJ_P0036138 Hist1h2ab protein_coding protein_coding MGP_CBAJ_T0101605.1 MGP_CBAJ_G0039636.1 mouse_genomes_project 13 21790421 21791323 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0036419.1 MGP_CBAJ_G0020186.1 mouse_genomes_project 13 40174524 40211323 - MGP_CBAJ_P0036419 Slc35b3 protein_coding unknown_likely_coding MGP_CBAJ_T0036420.1 MGP_CBAJ_G0020186.1 mouse_genomes_project 13 40174532 40211320 - MGP_CBAJ_P0036420 Slc35b3 protein_coding protein_coding MGP_CBAJ_T0036421.1 MGP_CBAJ_G0020186.1 mouse_genomes_project 13 40174532 40211658 - MGP_CBAJ_P0036421 Slc35b3 protein_coding protein_coding MGP_CBAJ_T0012712.1 MGP_CBAJ_G0010824.1 mouse_genomes_project 13 20109681 20110356 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0036449.1 MGP_CBAJ_G0020201.1 mouse_genomes_project 13 43195690 43196518 + MGP_CBAJ_P0036449 Gm5082 protein_coding protein_coding MGP_CBAJ_T0036126.1 MGP_CBAJ_G0020058.1 mouse_genomes_project 13 22672483 22678742 - MGP_CBAJ_P0036126 Hist1h1e protein_coding protein_coding MGP_CBAJ_T0006522.1 MGP_CBAJ_G0005397.1 mouse_genomes_project 13 104580886 104581853 + Gm29543 lincRNA lincRNA MGP_CBAJ_T0036192.1 MGP_CBAJ_G0020085.1 mouse_genomes_project 13 23979775 23992062 + MGP_CBAJ_P0036192 BC005537 protein_coding protein_coding MGP_CBAJ_T0036193.1 MGP_CBAJ_G0020085.1 mouse_genomes_project 13 23980138 23990779 + MGP_CBAJ_P0036193 BC005537 protein_coding protein_coding MGP_CBAJ_T0003394.1 MGP_CBAJ_G0003110.1 mouse_genomes_project 13 71995165 72910931 + antisense antisense MGP_CBAJ_T0003396.1 MGP_CBAJ_G0003110.1 mouse_genomes_project 13 72863814 72915525 + antisense antisense MGP_CBAJ_T0003397.1 MGP_CBAJ_G0003110.1 mouse_genomes_project 13 72896783 72916650 + antisense antisense MGP_CBAJ_T0037131.1 MGP_CBAJ_G0020429.1 mouse_genomes_project 13 72992780 72993793 + MGP_CBAJ_P0037131 protein_coding protein_coding MGP_CBAJ_T0009819.1 MGP_CBAJ_G0007957.1 mouse_genomes_project 13 61976800 61976906 - Mir6369 miRNA miRNA MGP_CBAJ_T0037829.1 MGP_CBAJ_G0020653.1 mouse_genomes_project 13 124272469 124298849 - MGP_CBAJ_P0037829 Snx18 protein_coding protein_coding MGP_CBAJ_T0041833.1 MGP_CBAJ_G0021933.1 mouse_genomes_project 15 97042929 97044734 - MGP_CBAJ_P0041833 Odf3b protein_coding protein_coding MGP_CBAJ_T0041834.1 MGP_CBAJ_G0021933.1 mouse_genomes_project 15 97042985 97044658 - MGP_CBAJ_P0041834 Odf3b protein_coding unknown_likely_coding MGP_CBAJ_T0040807.1 MGP_CBAJ_G0021637.1 mouse_genomes_project 15 79853431 79857008 + MGP_CBAJ_P0040807 Them6 protein_coding protein_coding MGP_CBAJ_T0040099.1 MGP_CBAJ_G0021403.1 mouse_genomes_project 15 2143685 2146213 + MGP_CBAJ_P0040099 Rpl37 protein_coding protein_coding MGP_CBAJ_T0040095.1 MGP_CBAJ_G0021400.1 mouse_genomes_project 15 1903674 1972083 + MGP_CBAJ_P0040095 Mroh2b protein_coding protein_coding MGP_CBAJ_T0098908.1 MGP_CBAJ_G0037163.1 mouse_genomes_project 15 77642961 77643028 - Gm28020 snRNA snRNA MGP_CBAJ_T0041902.1 MGP_CBAJ_G0021952.1 mouse_genomes_project 15 99821147 99850172 + MGP_CBAJ_P0041902 protein_coding protein_coding MGP_CBAJ_T0041903.1 MGP_CBAJ_G0021952.1 mouse_genomes_project 15 99821210 99850541 + MGP_CBAJ_P0041903 protein_coding protein_coding MGP_CBAJ_T0041904.1 MGP_CBAJ_G0021952.1 mouse_genomes_project 15 99821218 99828425 + MGP_CBAJ_P0041904 protein_coding protein_coding MGP_CBAJ_T0041905.1 MGP_CBAJ_G0021952.1 mouse_genomes_project 15 99824304 99850543 + MGP_CBAJ_P0041905 protein_coding protein_coding MGP_CBAJ_T0041906.1 MGP_CBAJ_G0021952.1 mouse_genomes_project 15 99827240 99850545 + MGP_CBAJ_P0041906 protein_coding protein_coding MGP_CBAJ_T0041907.1 MGP_CBAJ_G0021952.1 mouse_genomes_project 15 99828339 99850545 + MGP_CBAJ_P0041907 protein_coding protein_coding MGP_CBAJ_T0041152.1 MGP_CBAJ_G0021729.1 mouse_genomes_project 15 83035220 83045386 - MGP_CBAJ_P0041152 protein_coding protein_coding MGP_CBAJ_T0042348.1 MGP_CBAJ_G0022108.1 mouse_genomes_project 15 112127810 112130099 + MGP_CBAJ_P0042348 Mfsd5 protein_coding protein_coding MGP_CBAJ_T0101659.1 MGP_CBAJ_G0039690.1 mouse_genomes_project 15 80586369 80589511 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0041402.1 MGP_CBAJ_G0021803.1 mouse_genomes_project 15 86627413 86748666 - MGP_CBAJ_P0041402 Enthd1 protein_coding protein_coding MGP_CBAJ_T0040537.1 MGP_CBAJ_G0021547.1 mouse_genomes_project 15 54634834 54718628 - MGP_CBAJ_P0040537 Eif3h protein_coding protein_coding MGP_CBAJ_T0009958.1 MGP_CBAJ_G0008096.1 mouse_genomes_project 15 91917637 91917735 - Mir1249 miRNA miRNA MGP_CBAJ_T0041855.1 MGP_CBAJ_G0021940.1 mouse_genomes_project 15 97162222 97167172 - MGP_CBAJ_P0041855 Arsa protein_coding protein_coding MGP_CBAJ_T0041856.1 MGP_CBAJ_G0021940.1 mouse_genomes_project 15 97162274 97165860 - Arsa protein_coding retained_intron MGP_CBAJ_T0041857.1 MGP_CBAJ_G0021940.1 mouse_genomes_project 15 97162986 97164018 - MGP_CBAJ_P0041857 Arsa protein_coding protein_coding MGP_CBAJ_T0041858.1 MGP_CBAJ_G0021940.1 mouse_genomes_project 15 97165977 97167158 - Arsa protein_coding processed_transcript MGP_CBAJ_T0006720.1 MGP_CBAJ_G0005535.1 mouse_genomes_project 15 113069708 113075668 - Gm28876 lincRNA lincRNA MGP_CBAJ_T0041482.1 MGP_CBAJ_G0021820.1 mouse_genomes_project 15 88038498 88070592 - MGP_CBAJ_P0041482 Rangap1 protein_coding protein_coding MGP_CBAJ_T0041483.1 MGP_CBAJ_G0021820.1 mouse_genomes_project 15 88038498 88070592 - MGP_CBAJ_P0041483 Rangap1 protein_coding protein_coding MGP_CBAJ_T0041484.1 MGP_CBAJ_G0021820.1 mouse_genomes_project 15 88038867 88070539 - MGP_CBAJ_P0041484 Rangap1 protein_coding protein_coding MGP_CBAJ_T0017207.1 MGP_CBAJ_G0015040.1 mouse_genomes_project 15 71357779 71402387 + Gm2895 processed_transcript processed_transcript MGP_CBAJ_T0100183.1 MGP_CBAJ_G0038438.1 mouse_genomes_project 15 103038822 103038954 - Gm25546 snoRNA snoRNA MGP_CBAJ_T0040332.1 MGP_CBAJ_G0021472.1 mouse_genomes_project 15 30361868 31290435 + MGP_CBAJ_P0040332 Ctnnd2 protein_coding protein_coding MGP_CBAJ_T0041213.1 MGP_CBAJ_G0021751.1 mouse_genomes_project 15 84388786 84406589 - MGP_CBAJ_P0041213 Rac2 protein_coding protein_coding MGP_CBAJ_T0009973.1 MGP_CBAJ_G0008111.1 mouse_genomes_project 15 111001179 111001262 + Mir1941 miRNA miRNA MGP_CBAJ_T0041549.1 MGP_CBAJ_G0021842.1 mouse_genomes_project 15 88723203 88742704 + MGP_CBAJ_P0041549 Sept3 protein_coding protein_coding MGP_CBAJ_T0041550.1 MGP_CBAJ_G0021842.1 mouse_genomes_project 15 88723515 88740320 + MGP_CBAJ_P0041550 Sept3 protein_coding protein_coding MGP_CBAJ_T0042449.1 MGP_CBAJ_G0022136.1 mouse_genomes_project 15 113171385 113230382 - MGP_CBAJ_P0042449 Cbx5 protein_coding protein_coding MGP_CBAJ_T0042450.1 MGP_CBAJ_G0022136.1 mouse_genomes_project 15 113176527 113196708 - MGP_CBAJ_P0042450 Cbx5 protein_coding protein_coding MGP_CBAJ_T0042451.1 MGP_CBAJ_G0022136.1 mouse_genomes_project 15 113179095 113196661 - MGP_CBAJ_P0042451 Cbx5 protein_coding protein_coding MGP_CBAJ_T0042452.1 MGP_CBAJ_G0022136.1 mouse_genomes_project 15 113194434 113196722 - MGP_CBAJ_P0042452 Cbx5 protein_coding protein_coding MGP_CBAJ_T0042468.1 MGP_CBAJ_G0022143.1 mouse_genomes_project 15 113415733 113441562 - MGP_CBAJ_P0042468 Gtsf1 protein_coding protein_coding MGP_CBAJ_T0042469.1 MGP_CBAJ_G0022143.1 mouse_genomes_project 15 113415784 113439698 - MGP_CBAJ_P0042469 Gtsf1 protein_coding protein_coding MGP_CBAJ_T0042470.1 MGP_CBAJ_G0022143.1 mouse_genomes_project 15 113415784 113439592 - MGP_CBAJ_P0042470 Gtsf1 protein_coding protein_coding MGP_CBAJ_T0042471.1 MGP_CBAJ_G0022143.1 mouse_genomes_project 15 113415787 113440654 - MGP_CBAJ_P0042471 Gtsf1 protein_coding protein_coding MGP_CBAJ_T0042472.1 MGP_CBAJ_G0022143.1 mouse_genomes_project 15 113415809 113441441 - MGP_CBAJ_P0042472 Gtsf1 protein_coding protein_coding MGP_CBAJ_T0042473.1 MGP_CBAJ_G0022143.1 mouse_genomes_project 15 113415821 113441436 - MGP_CBAJ_P0042473 Gtsf1 protein_coding protein_coding MGP_CBAJ_T0042474.1 MGP_CBAJ_G0022143.1 mouse_genomes_project 15 113415840 113441471 - MGP_CBAJ_P0042474 Gtsf1 protein_coding protein_coding MGP_CBAJ_T0042475.1 MGP_CBAJ_G0022143.1 mouse_genomes_project 15 113428685 113441501 - MGP_CBAJ_P0042475 Gtsf1 protein_coding protein_coding MGP_CBAJ_T0042476.1 MGP_CBAJ_G0022143.1 mouse_genomes_project 15 113431086 113441336 - MGP_CBAJ_P0042476 Gtsf1 protein_coding protein_coding MGP_CBAJ_T0042207.1 MGP_CBAJ_G0022052.1 mouse_genomes_project 15 109766132 109783372 + MGP_CBAJ_P0042207 protein_coding protein_coding MGP_CBAJ_T0009982.1 MGP_CBAJ_G0008120.1 mouse_genomes_project 15 112981529 112981621 + Mir615 miRNA miRNA MGP_CBAJ_T0040714.1 MGP_CBAJ_G0021613.1 mouse_genomes_project 15 71164607 71217824 - MGP_CBAJ_P0040714 Sla protein_coding protein_coding MGP_CBAJ_T0040715.1 MGP_CBAJ_G0021613.1 mouse_genomes_project 15 71164652 71198832 - MGP_CBAJ_P0040715 Sla protein_coding protein_coding MGP_CBAJ_T0040716.1 MGP_CBAJ_G0021613.1 mouse_genomes_project 15 71165866 71185828 - MGP_CBAJ_P0040716 Sla protein_coding protein_coding MGP_CBAJ_T0040717.1 MGP_CBAJ_G0021613.1 mouse_genomes_project 15 71166330 71218007 - MGP_CBAJ_P0040717 Sla protein_coding protein_coding MGP_CBAJ_T0040718.1 MGP_CBAJ_G0021613.1 mouse_genomes_project 15 71169508 71187985 - Sla protein_coding retained_intron MGP_CBAJ_T0017206.1 MGP_CBAJ_G0015039.1 mouse_genomes_project 15 70178200 70178688 + Gm20405 processed_transcript processed_transcript MGP_CBAJ_T0040331.1 MGP_CBAJ_G0021471.1 mouse_genomes_project 15 28161978 28442373 + MGP_CBAJ_P0040331 Dnah5 protein_coding protein_coding MGP_CBAJ_T0042065.1 MGP_CBAJ_G0022004.1 mouse_genomes_project 15 107553397 107577517 + MGP_CBAJ_P0042065 4930415O20Rik protein_coding protein_coding MGP_CBAJ_T0041125.1 MGP_CBAJ_G0021719.1 mouse_genomes_project 15 82361148 82387225 - MGP_CBAJ_P0041125 Zfp251 protein_coding protein_coding MGP_CBAJ_T0041565.1 MGP_CBAJ_G0021850.1 mouse_genomes_project 15 88938334 88955278 + MGP_CBAJ_P0041565 protein_coding unknown_likely_coding MGP_CBAJ_T0101652.1 MGP_CBAJ_G0039683.1 mouse_genomes_project 15 80099937 80100787 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0040337.1 MGP_CBAJ_G0021474.1 mouse_genomes_project 15 31563286 31563703 + MGP_CBAJ_P0040337 Fam136b-ps protein_coding protein_coding MGP_CBAJ_T0006701.1 MGP_CBAJ_G0005522.1 mouse_genomes_project 15 100451585 100488730 + Gm26760 lincRNA lincRNA MGP_CBAJ_T0041155.1 MGP_CBAJ_G0021732.1 mouse_genomes_project 15 83419554 83427291 + MGP_CBAJ_P0041155 protein_coding protein_coding MGP_CBAJ_T0041157.1 MGP_CBAJ_G0021732.1 mouse_genomes_project 15 83419600 83427291 + MGP_CBAJ_P0041157 protein_coding protein_coding MGP_CBAJ_T0042098.1 MGP_CBAJ_G0022019.1 mouse_genomes_project 15 107958975 107977531 - MGP_CBAJ_P0042098 Lmbr1l protein_coding protein_coding MGP_CBAJ_T0042099.1 MGP_CBAJ_G0022019.1 mouse_genomes_project 15 107960713 107966322 - Lmbr1l protein_coding processed_transcript MGP_CBAJ_T0042100.1 MGP_CBAJ_G0022019.1 mouse_genomes_project 15 107964557 107966648 - Lmbr1l protein_coding retained_intron MGP_CBAJ_T0042101.1 MGP_CBAJ_G0022019.1 mouse_genomes_project 15 107965264 107966845 - Lmbr1l protein_coding retained_intron MGP_CBAJ_T0042102.1 MGP_CBAJ_G0022019.1 mouse_genomes_project 15 107970886 107977665 - Lmbr1l protein_coding processed_transcript MGP_CBAJ_T0042103.1 MGP_CBAJ_G0022019.1 mouse_genomes_project 15 107974296 107977360 - Lmbr1l protein_coding processed_transcript MGP_CBAJ_T0042349.1 MGP_CBAJ_G0022109.1 mouse_genomes_project 15 112144645 112182575 + MGP_CBAJ_P0042349 Espl1 protein_coding protein_coding MGP_CBAJ_T0012908.1 MGP_CBAJ_G0011020.1 mouse_genomes_project 15 46835596 46835932 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0041852.1 MGP_CBAJ_G0021938.1 mouse_genomes_project 15 97105910 97107190 + MGP_CBAJ_P0041852 C730034F03Rik protein_coding protein_coding MGP_CBAJ_T0042300.1 MGP_CBAJ_G0022080.1 mouse_genomes_project 15 111132160 111151355 + MGP_CBAJ_P0042300 Krt86 protein_coding protein_coding MGP_CBAJ_T0009979.1 MGP_CBAJ_G0008117.1 mouse_genomes_project 15 111645026 111645137 + Gm44356 miRNA miRNA MGP_CBAJ_T0042436.1 MGP_CBAJ_G0022129.1 mouse_genomes_project 15 112930875 112935943 + MGP_CBAJ_P0042436 Hoxc10 protein_coding protein_coding MGP_CBAJ_T0040494.1 MGP_CBAJ_G0021529.1 mouse_genomes_project 15 41496817 41503307 + MGP_CBAJ_P0040494 9330182O14Rik protein_coding protein_coding MGP_CBAJ_T0009957.1 MGP_CBAJ_G0008095.1 mouse_genomes_project 15 91008601 91008709 + Mir6392 miRNA miRNA MGP_CBAJ_T0006643.1 MGP_CBAJ_G0005484.1 mouse_genomes_project 15 930556 951214 + Gm2093 lincRNA lincRNA MGP_CBAJ_T0003549.1 MGP_CBAJ_G0003217.1 mouse_genomes_project 15 97165982 97174529 + C230037L18Rik antisense antisense MGP_CBAJ_T0003550.1 MGP_CBAJ_G0003217.1 mouse_genomes_project 15 97165998 97167595 + C230037L18Rik antisense antisense MGP_CBAJ_T0003551.1 MGP_CBAJ_G0003217.1 mouse_genomes_project 15 97167420 97174464 + C230037L18Rik antisense antisense MGP_CBAJ_T0006700.1 MGP_CBAJ_G0005521.1 mouse_genomes_project 15 99526712 99536142 + 4933438A12Rik lincRNA lincRNA MGP_CBAJ_T0040744.1 MGP_CBAJ_G0021619.1 mouse_genomes_project 15 76279726 76570431 - MGP_CBAJ_P0040744 Fam135b protein_coding protein_coding MGP_CBAJ_T0041972.1 MGP_CBAJ_G0021979.1 mouse_genomes_project 15 106512404 106532791 - MGP_CBAJ_P0041972 Endou protein_coding protein_coding MGP_CBAJ_T0041973.1 MGP_CBAJ_G0021979.1 mouse_genomes_project 15 106512404 106522536 - MGP_CBAJ_P0041973 Endou protein_coding protein_coding MGP_CBAJ_T0003533.1 MGP_CBAJ_G0003206.1 mouse_genomes_project 15 79841559 79842773 + 4933427E11Rik antisense antisense MGP_CBAJ_T0003534.1 MGP_CBAJ_G0003206.1 mouse_genomes_project 15 79841559 79842771 + 4933427E11Rik antisense antisense MGP_CBAJ_T0042465.1 MGP_CBAJ_G0022140.1 mouse_genomes_project 15 113307561 113309755 - MGP_CBAJ_P0042465 Gpr84 protein_coding protein_coding MGP_CBAJ_T0097967.1 MGP_CBAJ_G0036240.1 mouse_genomes_project 15 109903944 109904054 + n-R5s43 rRNA rRNA MGP_CBAJ_T0042313.1 MGP_CBAJ_G0022092.1 mouse_genomes_project 15 111615425 111626330 - MGP_CBAJ_P0042313 Krt77 protein_coding protein_coding MGP_CBAJ_T0012915.1 MGP_CBAJ_G0011027.1 mouse_genomes_project 15 63708424 63709431 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0003520.1 MGP_CBAJ_G0003195.1 mouse_genomes_project 15 38238798 38240037 - Gm16136 antisense antisense MGP_CBAJ_T0003521.1 MGP_CBAJ_G0003195.1 mouse_genomes_project 15 38238816 38240187 - Gm16136 antisense antisense MGP_CBAJ_T0003522.1 MGP_CBAJ_G0003195.1 mouse_genomes_project 15 38239532 38240019 - Gm16136 antisense antisense MGP_CBAJ_T0041788.1 MGP_CBAJ_G0021922.1 mouse_genomes_project 15 96759510 96766879 - MGP_CBAJ_P0041788 Mapk11 protein_coding protein_coding MGP_CBAJ_T0040529.1 MGP_CBAJ_G0021546.1 mouse_genomes_project 15 53352374 53610137 - MGP_CBAJ_P0040529 Trps1 protein_coding protein_coding MGP_CBAJ_T0040530.1 MGP_CBAJ_G0021546.1 mouse_genomes_project 15 53356044 53610146 - MGP_CBAJ_P0040530 Trps1 protein_coding protein_coding MGP_CBAJ_T0040531.1 MGP_CBAJ_G0021546.1 mouse_genomes_project 15 53356062 53609494 - MGP_CBAJ_P0040531 Trps1 protein_coding protein_coding MGP_CBAJ_T0040532.1 MGP_CBAJ_G0021546.1 mouse_genomes_project 15 53358067 53609491 - MGP_CBAJ_P0040532 Trps1 protein_coding protein_coding MGP_CBAJ_T0040533.1 MGP_CBAJ_G0021546.1 mouse_genomes_project 15 53358068 53603262 - MGP_CBAJ_P0040533 Trps1 protein_coding protein_coding MGP_CBAJ_T0040534.1 MGP_CBAJ_G0021546.1 mouse_genomes_project 15 53358084 53610293 - MGP_CBAJ_P0040534 Trps1 protein_coding protein_coding MGP_CBAJ_T0040535.1 MGP_CBAJ_G0021546.1 mouse_genomes_project 15 53535049 53543063 - MGP_CBAJ_P0040535 Trps1 protein_coding protein_coding MGP_CBAJ_T0040536.1 MGP_CBAJ_G0021546.1 mouse_genomes_project 15 53563125 53610715 - MGP_CBAJ_P0040536 Trps1 protein_coding protein_coding MGP_CBAJ_T0009913.1 MGP_CBAJ_G0008051.1 mouse_genomes_project 15 36439132 36439220 - Mir599 miRNA miRNA MGP_CBAJ_T0040108.1 MGP_CBAJ_G0021408.1 mouse_genomes_project 15 3448285 3615535 + Dab2 protein_coding processed_transcript MGP_CBAJ_T0040109.1 MGP_CBAJ_G0021408.1 mouse_genomes_project 15 3448285 3620727 + MGP_CBAJ_P0040109 Dab2 protein_coding protein_coding MGP_CBAJ_T0040110.1 MGP_CBAJ_G0021408.1 mouse_genomes_project 15 3448310 3597101 + MGP_CBAJ_P0040110 Dab2 protein_coding protein_coding MGP_CBAJ_T0040111.1 MGP_CBAJ_G0021408.1 mouse_genomes_project 15 3448329 3607930 + MGP_CBAJ_P0040111 Dab2 protein_coding protein_coding MGP_CBAJ_T0040112.1 MGP_CBAJ_G0021408.1 mouse_genomes_project 15 3448365 3494006 + Dab2 protein_coding processed_transcript MGP_CBAJ_T0040113.1 MGP_CBAJ_G0021408.1 mouse_genomes_project 15 3563420 3620720 + MGP_CBAJ_P0040113 Dab2 protein_coding protein_coding MGP_CBAJ_T0040114.1 MGP_CBAJ_G0021408.1 mouse_genomes_project 15 3563570 3620720 + MGP_CBAJ_P0040114 Dab2 protein_coding protein_coding MGP_CBAJ_T0040115.1 MGP_CBAJ_G0021408.1 mouse_genomes_project 15 3563598 3619643 + MGP_CBAJ_P0040115 Dab2 protein_coding protein_coding MGP_CBAJ_T0040116.1 MGP_CBAJ_G0021408.1 mouse_genomes_project 15 3563599 3619663 + MGP_CBAJ_P0040116 Dab2 protein_coding protein_coding MGP_CBAJ_T0040117.1 MGP_CBAJ_G0021408.1 mouse_genomes_project 15 3563601 3607930 + MGP_CBAJ_P0040117 Dab2 protein_coding protein_coding MGP_CBAJ_T0040118.1 MGP_CBAJ_G0021408.1 mouse_genomes_project 15 3566114 3598483 + MGP_CBAJ_P0040118 Dab2 protein_coding protein_coding MGP_CBAJ_T0040119.1 MGP_CBAJ_G0021408.1 mouse_genomes_project 15 3567171 3600002 + MGP_CBAJ_P0040119 Dab2 protein_coding protein_coding MGP_CBAJ_T0040120.1 MGP_CBAJ_G0021408.1 mouse_genomes_project 15 3602404 3618922 + MGP_CBAJ_P0040120 Dab2 protein_coding protein_coding MGP_CBAJ_T0040121.1 MGP_CBAJ_G0021408.1 mouse_genomes_project 15 3603326 3605189 + Dab2 protein_coding retained_intron MGP_CBAJ_T0040870.1 MGP_CBAJ_G0021660.1 mouse_genomes_project 15 80971947 80973533 + MGP_CBAJ_P0040870 Gpihbp1 protein_coding protein_coding MGP_CBAJ_T0040871.1 MGP_CBAJ_G0021660.1 mouse_genomes_project 15 80971949 80973533 + MGP_CBAJ_P0040871 Gpihbp1 protein_coding protein_coding MGP_CBAJ_T0040872.1 MGP_CBAJ_G0021660.1 mouse_genomes_project 15 80971973 80974801 + MGP_CBAJ_P0040872 Gpihbp1 protein_coding protein_coding MGP_CBAJ_T0040873.1 MGP_CBAJ_G0021660.1 mouse_genomes_project 15 80971987 80973264 + Gpihbp1 protein_coding retained_intron MGP_CBAJ_T0040874.1 MGP_CBAJ_G0021660.1 mouse_genomes_project 15 80971987 80973508 + Gpihbp1 protein_coding retained_intron MGP_CBAJ_T0040171.1 MGP_CBAJ_G0021422.1 mouse_genomes_project 15 6507492 6548718 + Nadk2 protein_coding processed_transcript MGP_CBAJ_T0040172.1 MGP_CBAJ_G0021422.1 mouse_genomes_project 15 6507492 6548718 + MGP_CBAJ_P0040172 Nadk2 protein_coding protein_coding MGP_CBAJ_T0040173.1 MGP_CBAJ_G0021422.1 mouse_genomes_project 15 6507492 6548718 + MGP_CBAJ_P0040173 Nadk2 protein_coding protein_coding MGP_CBAJ_T0040174.1 MGP_CBAJ_G0021422.1 mouse_genomes_project 15 6507748 6548398 + MGP_CBAJ_P0040174 Nadk2 protein_coding unknown_likely_coding MGP_CBAJ_T0040175.1 MGP_CBAJ_G0021422.1 mouse_genomes_project 15 6507927 6548091 + Nadk2 protein_coding processed_transcript MGP_CBAJ_T0040176.1 MGP_CBAJ_G0021422.1 mouse_genomes_project 15 6507933 6545404 + Nadk2 protein_coding processed_transcript MGP_CBAJ_T0040177.1 MGP_CBAJ_G0021422.1 mouse_genomes_project 15 6522022 6545069 + Nadk2 protein_coding processed_transcript MGP_CBAJ_T0040178.1 MGP_CBAJ_G0021422.1 mouse_genomes_project 15 6538368 6545410 + MGP_CBAJ_P0040178 Nadk2 protein_coding protein_coding MGP_CBAJ_T0040179.1 MGP_CBAJ_G0021422.1 mouse_genomes_project 15 6541216 6545002 + Nadk2 protein_coding retained_intron MGP_CBAJ_T0017188.1 MGP_CBAJ_G0015032.1 mouse_genomes_project 15 4668102 4681392 + Gm16029 processed_transcript processed_transcript MGP_CBAJ_T0040559.1 MGP_CBAJ_G0021560.1 mouse_genomes_project 15 57996912 58077409 - MGP_CBAJ_P0040559 Enpp2 protein_coding protein_coding MGP_CBAJ_T0040560.1 MGP_CBAJ_G0021560.1 mouse_genomes_project 15 57996915 58077265 - MGP_CBAJ_P0040560 Enpp2 protein_coding protein_coding MGP_CBAJ_T0040561.1 MGP_CBAJ_G0021560.1 mouse_genomes_project 15 57997283 58077281 - MGP_CBAJ_P0040561 Enpp2 protein_coding protein_coding MGP_CBAJ_T0040562.1 MGP_CBAJ_G0021560.1 mouse_genomes_project 15 57997380 58077224 - MGP_CBAJ_P0040562 Enpp2 protein_coding protein_coding MGP_CBAJ_T0098283.1 MGP_CBAJ_G0036552.1 mouse_genomes_project 15 38252320 38253080 + Gm16137 sense_intronic sense_intronic MGP_CBAJ_T0098907.1 MGP_CBAJ_G0037162.1 mouse_genomes_project 15 77401526 77401588 - Gm24390 snRNA snRNA MGP_CBAJ_T0041008.1 MGP_CBAJ_G0021693.1 mouse_genomes_project 15 81783432 81786511 + MGP_CBAJ_P0041008 Maf1 protein_coding protein_coding MGP_CBAJ_T0041009.1 MGP_CBAJ_G0021693.1 mouse_genomes_project 15 81783432 81786512 + MGP_CBAJ_P0041009 Maf1 protein_coding protein_coding MGP_CBAJ_T0041010.1 MGP_CBAJ_G0021693.1 mouse_genomes_project 15 81783444 81786512 + MGP_CBAJ_P0041010 Maf1 protein_coding protein_coding MGP_CBAJ_T0041011.1 MGP_CBAJ_G0021693.1 mouse_genomes_project 15 81783447 81785145 + Maf1 protein_coding retained_intron MGP_CBAJ_T0041012.1 MGP_CBAJ_G0021693.1 mouse_genomes_project 15 81783465 81784586 + Maf1 protein_coding processed_transcript MGP_CBAJ_T0041013.1 MGP_CBAJ_G0021693.1 mouse_genomes_project 15 81783465 81786519 + MGP_CBAJ_P0041013 Maf1 protein_coding protein_coding MGP_CBAJ_T0041014.1 MGP_CBAJ_G0021693.1 mouse_genomes_project 15 81783491 81784206 + Maf1 protein_coding retained_intron MGP_CBAJ_T0041015.1 MGP_CBAJ_G0021693.1 mouse_genomes_project 15 81783547 81785038 + Maf1 protein_coding retained_intron MGP_CBAJ_T0041016.1 MGP_CBAJ_G0021693.1 mouse_genomes_project 15 81784144 81785325 + MGP_CBAJ_P0041016 Maf1 protein_coding protein_coding MGP_CBAJ_T0041017.1 MGP_CBAJ_G0021693.1 mouse_genomes_project 15 81784172 81785039 + Maf1 protein_coding retained_intron MGP_CBAJ_T0041018.1 MGP_CBAJ_G0021693.1 mouse_genomes_project 15 81784908 81786130 + Maf1 protein_coding retained_intron MGP_CBAJ_T0041019.1 MGP_CBAJ_G0021693.1 mouse_genomes_project 15 81785032 81786165 + Maf1 protein_coding retained_intron MGP_CBAJ_T0041020.1 MGP_CBAJ_G0021693.1 mouse_genomes_project 15 81785239 81786212 + Maf1 protein_coding retained_intron MGP_CBAJ_T0041021.1 MGP_CBAJ_G0021693.1 mouse_genomes_project 15 81785553 81786254 + MGP_CBAJ_P0041021 Maf1 protein_coding protein_coding MGP_CBAJ_T0011275.1 MGP_CBAJ_G0009413.1 mouse_genomes_project 15 112911683 112911781 + Gm27443 misc_RNA misc_RNA MGP_CBAJ_T0009961.1 MGP_CBAJ_G0008099.1 mouse_genomes_project 15 94442096 94442191 + Gm23416 miRNA miRNA MGP_CBAJ_T0041699.1 MGP_CBAJ_G0021897.1 mouse_genomes_project 15 92961579 92966305 - MGP_CBAJ_P0041699 Cdpf1 protein_coding protein_coding MGP_CBAJ_T0041700.1 MGP_CBAJ_G0021897.1 mouse_genomes_project 15 92961807 92966263 - MGP_CBAJ_P0041700 Cdpf1 protein_coding protein_coding MGP_CBAJ_T0041701.1 MGP_CBAJ_G0021897.1 mouse_genomes_project 15 92961851 92966253 - MGP_CBAJ_P0041701 Cdpf1 protein_coding protein_coding MGP_CBAJ_T0041702.1 MGP_CBAJ_G0021897.1 mouse_genomes_project 15 92961854 92965699 - MGP_CBAJ_P0041702 Cdpf1 protein_coding protein_coding MGP_CBAJ_T0041703.1 MGP_CBAJ_G0021897.1 mouse_genomes_project 15 92961864 92966306 - MGP_CBAJ_P0041703 Cdpf1 protein_coding protein_coding MGP_CBAJ_T0041704.1 MGP_CBAJ_G0021897.1 mouse_genomes_project 15 92962851 92966268 - MGP_CBAJ_P0041704 Cdpf1 protein_coding protein_coding MGP_CBAJ_T0040944.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81582521 81611514 - MGP_CBAJ_P0040944 Plec protein_coding protein_coding MGP_CBAJ_T0040945.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81582526 81621017 - MGP_CBAJ_P0040945 Plec protein_coding protein_coding MGP_CBAJ_T0040946.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81582526 81611689 - MGP_CBAJ_P0040946 Plec protein_coding protein_coding MGP_CBAJ_T0040947.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81582526 81645560 - MGP_CBAJ_P0040947 Plec protein_coding protein_coding MGP_CBAJ_T0040948.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81582526 81618173 - MGP_CBAJ_P0040948 Plec protein_coding protein_coding MGP_CBAJ_T0040949.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81582527 81643679 - MGP_CBAJ_P0040949 Plec protein_coding protein_coding MGP_CBAJ_T0040950.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81582528 81618174 - MGP_CBAJ_P0040950 Plec protein_coding protein_coding MGP_CBAJ_T0040951.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81582528 81610063 - MGP_CBAJ_P0040951 Plec protein_coding protein_coding MGP_CBAJ_T0040952.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81582528 81612461 - MGP_CBAJ_P0040952 Plec protein_coding protein_coding MGP_CBAJ_T0040953.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81582528 81607564 - MGP_CBAJ_P0040953 Plec protein_coding protein_coding MGP_CBAJ_T0040954.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81582528 81611689 - MGP_CBAJ_P0040954 Plec protein_coding protein_coding MGP_CBAJ_T0040955.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81586932 81599897 - MGP_CBAJ_P0040955 Plec protein_coding protein_coding MGP_CBAJ_T0040956.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81598464 81618173 - MGP_CBAJ_P0040956 Plec protein_coding protein_coding MGP_CBAJ_T0040957.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81600317 81620105 - MGP_CBAJ_P0040957 Plec protein_coding protein_coding MGP_CBAJ_T0040958.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81600317 81611689 - MGP_CBAJ_P0040958 Plec protein_coding protein_coding MGP_CBAJ_T0040959.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81600317 81646227 - MGP_CBAJ_P0040959 Plec protein_coding protein_coding MGP_CBAJ_T0040960.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81600394 81646752 - MGP_CBAJ_P0040960 Plec protein_coding protein_coding MGP_CBAJ_T0040961.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81606246 81612461 - MGP_CBAJ_P0040961 Plec protein_coding protein_coding MGP_CBAJ_T0040962.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81606246 81621017 - MGP_CBAJ_P0040962 Plec protein_coding protein_coding MGP_CBAJ_T0040963.1 MGP_CBAJ_G0021683.1 mouse_genomes_project 15 81644916 81646756 - Plec protein_coding retained_intron MGP_CBAJ_T0040201.1 MGP_CBAJ_G0021430.1 mouse_genomes_project 15 7728366 7899308 + Prlr protein_coding retained_intron MGP_CBAJ_T0040202.1 MGP_CBAJ_G0021430.1 mouse_genomes_project 15 7728542 7918434 + Prlr protein_coding processed_transcript MGP_CBAJ_T0040203.1 MGP_CBAJ_G0021430.1 mouse_genomes_project 15 7728774 7918704 + MGP_CBAJ_P0040203 Prlr protein_coding nonsense_mediated_decay MGP_CBAJ_T0040204.1 MGP_CBAJ_G0021430.1 mouse_genomes_project 15 7728783 7906925 + MGP_CBAJ_P0040204 Prlr protein_coding protein_coding MGP_CBAJ_T0040205.1 MGP_CBAJ_G0021430.1 mouse_genomes_project 15 7728909 7882632 + Prlr protein_coding retained_intron MGP_CBAJ_T0040206.1 MGP_CBAJ_G0021430.1 mouse_genomes_project 15 7764709 7881920 + Prlr protein_coding processed_transcript MGP_CBAJ_T0040207.1 MGP_CBAJ_G0021430.1 mouse_genomes_project 15 7767199 7881986 + MGP_CBAJ_P0040207 Prlr protein_coding protein_coding MGP_CBAJ_T0040208.1 MGP_CBAJ_G0021430.1 mouse_genomes_project 15 7775200 7911902 + MGP_CBAJ_P0040208 Prlr protein_coding protein_coding MGP_CBAJ_T0040209.1 MGP_CBAJ_G0021430.1 mouse_genomes_project 15 7775200 7915930 + MGP_CBAJ_P0040209 Prlr protein_coding protein_coding MGP_CBAJ_T0040210.1 MGP_CBAJ_G0021430.1 mouse_genomes_project 15 7775200 7919328 + MGP_CBAJ_P0040210 Prlr protein_coding protein_coding MGP_CBAJ_T0040211.1 MGP_CBAJ_G0021430.1 mouse_genomes_project 15 7804870 7885134 + MGP_CBAJ_P0040211 Prlr protein_coding protein_coding MGP_CBAJ_T0040212.1 MGP_CBAJ_G0021430.1 mouse_genomes_project 15 7876754 7885116 + MGP_CBAJ_P0040212 Prlr protein_coding protein_coding MGP_CBAJ_T0040344.1 MGP_CBAJ_G0021477.1 mouse_genomes_project 15 31762118 31854003 - MGP_CBAJ_P0040344 March6 protein_coding protein_coding MGP_CBAJ_T0041592.1 MGP_CBAJ_G0021860.1 mouse_genomes_project 15 89755083 89766343 - MGP_CBAJ_P0041592 Rrp7a protein_coding protein_coding MGP_CBAJ_T0041594.1 MGP_CBAJ_G0021860.1 mouse_genomes_project 15 89757498 89759357 - MGP_CBAJ_P0041594 Rrp7a protein_coding nonsense_mediated_decay MGP_CBAJ_T0041595.1 MGP_CBAJ_G0021860.1 mouse_genomes_project 15 89758626 89766316 - MGP_CBAJ_P0041595 Rrp7a protein_coding unknown_likely_coding MGP_CBAJ_T0041596.1 MGP_CBAJ_G0021860.1 mouse_genomes_project 15 89758966 89760087 - Rrp7a protein_coding retained_intron MGP_CBAJ_T0041597.1 MGP_CBAJ_G0021860.1 mouse_genomes_project 15 89760993 89763894 - MGP_CBAJ_P0041597 Rrp7a protein_coding protein_coding MGP_CBAJ_T0041598.1 MGP_CBAJ_G0021860.1 mouse_genomes_project 15 89761019 89766293 - MGP_CBAJ_P0041598 Rrp7a protein_coding nonsense_mediated_decay MGP_CBAJ_T0041542.1 MGP_CBAJ_G0021837.1 mouse_genomes_project 15 88562301 88625568 + MGP_CBAJ_P0041542 Srebf2 protein_coding protein_coding MGP_CBAJ_T0042084.1 MGP_CBAJ_G0022012.1 mouse_genomes_project 15 107806346 107812736 - MGP_CBAJ_P0042084 Wnt10b protein_coding protein_coding MGP_CBAJ_T0042085.1 MGP_CBAJ_G0022012.1 mouse_genomes_project 15 107806793 107811847 - MGP_CBAJ_P0042085 Wnt10b protein_coding protein_coding MGP_CBAJ_T0098918.1 MGP_CBAJ_G0037173.1 mouse_genomes_project 15 92415696 92415888 - Gm23517 snRNA snRNA MGP_CBAJ_T0041129.1 MGP_CBAJ_G0021722.1 mouse_genomes_project 15 82427343 82430784 + MGP_CBAJ_P0041129 Rpl8 protein_coding protein_coding MGP_CBAJ_T0041130.1 MGP_CBAJ_G0021722.1 mouse_genomes_project 15 82427346 82430785 + MGP_CBAJ_P0041130 Rpl8 protein_coding unknown_likely_coding MGP_CBAJ_T0040277.1 MGP_CBAJ_G0021452.1 mouse_genomes_project 15 10755801 10867837 + MGP_CBAJ_P0040277 Drosha protein_coding protein_coding MGP_CBAJ_T0040278.1 MGP_CBAJ_G0021452.1 mouse_genomes_project 15 10755849 10867790 + MGP_CBAJ_P0040278 Drosha protein_coding protein_coding MGP_CBAJ_T0040279.1 MGP_CBAJ_G0021452.1 mouse_genomes_project 15 10755876 10768911 + Drosha protein_coding processed_transcript MGP_CBAJ_T0040280.1 MGP_CBAJ_G0021452.1 mouse_genomes_project 15 10755876 10768911 + Drosha protein_coding processed_transcript MGP_CBAJ_T0040281.1 MGP_CBAJ_G0021452.1 mouse_genomes_project 15 10757112 10768829 + Drosha protein_coding processed_transcript MGP_CBAJ_T0040282.1 MGP_CBAJ_G0021452.1 mouse_genomes_project 15 10768118 10867669 + MGP_CBAJ_P0040282 Drosha protein_coding protein_coding MGP_CBAJ_T0040283.1 MGP_CBAJ_G0021452.1 mouse_genomes_project 15 10771647 10837802 + Drosha protein_coding retained_intron MGP_CBAJ_T0040284.1 MGP_CBAJ_G0021452.1 mouse_genomes_project 15 10812497 10819112 + Drosha protein_coding processed_transcript MGP_CBAJ_T0042086.1 MGP_CBAJ_G0022013.1 mouse_genomes_project 15 107828296 107832263 + MGP_CBAJ_P0042086 Wnt1 protein_coding protein_coding MGP_CBAJ_T0040180.1 MGP_CBAJ_G0021423.1 mouse_genomes_project 15 6550215 6587001 - MGP_CBAJ_P0040180 Skp2 protein_coding protein_coding MGP_CBAJ_T0040181.1 MGP_CBAJ_G0021423.1 mouse_genomes_project 15 6550215 6587075 - MGP_CBAJ_P0040181 Skp2 protein_coding protein_coding MGP_CBAJ_T0040182.1 MGP_CBAJ_G0021423.1 mouse_genomes_project 15 6551532 6602062 - MGP_CBAJ_P0040182 Skp2 protein_coding protein_coding MGP_CBAJ_T0040183.1 MGP_CBAJ_G0021423.1 mouse_genomes_project 15 6565285 6586988 - Skp2 protein_coding retained_intron MGP_CBAJ_T0040185.1 MGP_CBAJ_G0021423.1 mouse_genomes_project 15 6598912 6602063 - Skp2 protein_coding processed_transcript MGP_CBAJ_T0041395.1 MGP_CBAJ_G0021802.1 mouse_genomes_project 15 86442786 86573290 + MGP_CBAJ_P0041395 Cacna1i protein_coding protein_coding MGP_CBAJ_T0041396.1 MGP_CBAJ_G0021802.1 mouse_genomes_project 15 86443082 86570773 + MGP_CBAJ_P0041396 Cacna1i protein_coding nonsense_mediated_decay MGP_CBAJ_T0041397.1 MGP_CBAJ_G0021802.1 mouse_genomes_project 15 86443120 86573300 + MGP_CBAJ_P0041397 Cacna1i protein_coding unknown_likely_coding MGP_CBAJ_T0041398.1 MGP_CBAJ_G0021802.1 mouse_genomes_project 15 86564294 86568841 + MGP_CBAJ_P0041398 Cacna1i protein_coding protein_coding MGP_CBAJ_T0041399.1 MGP_CBAJ_G0021802.1 mouse_genomes_project 15 86564294 86565884 + MGP_CBAJ_P0041399 Cacna1i protein_coding nonsense_mediated_decay MGP_CBAJ_T0041400.1 MGP_CBAJ_G0021802.1 mouse_genomes_project 15 86564294 86565884 + MGP_CBAJ_P0041400 Cacna1i protein_coding protein_coding MGP_CBAJ_T0041401.1 MGP_CBAJ_G0021802.1 mouse_genomes_project 15 86564294 86565884 + MGP_CBAJ_P0041401 Cacna1i protein_coding protein_coding MGP_CBAJ_T0040767.1 MGP_CBAJ_G0021627.1 mouse_genomes_project 15 78596941 78625015 - MGP_CBAJ_P0040767 Slc45a4 protein_coding protein_coding MGP_CBAJ_T0040768.1 MGP_CBAJ_G0021627.1 mouse_genomes_project 15 78596951 78647163 - MGP_CBAJ_P0040768 Slc45a4 protein_coding protein_coding MGP_CBAJ_T0040769.1 MGP_CBAJ_G0021627.1 mouse_genomes_project 15 78599817 78625001 - MGP_CBAJ_P0040769 Slc45a4 protein_coding protein_coding MGP_CBAJ_T0040770.1 MGP_CBAJ_G0021627.1 mouse_genomes_project 15 78599817 78636856 - MGP_CBAJ_P0040770 Slc45a4 protein_coding protein_coding MGP_CBAJ_T0040771.1 MGP_CBAJ_G0021627.1 mouse_genomes_project 15 78599820 78647163 - MGP_CBAJ_P0040771 Slc45a4 protein_coding protein_coding MGP_CBAJ_T0040772.1 MGP_CBAJ_G0021627.1 mouse_genomes_project 15 78606421 78608490 - MGP_CBAJ_P0040772 Slc45a4 protein_coding protein_coding MGP_CBAJ_T0040773.1 MGP_CBAJ_G0021627.1 mouse_genomes_project 15 78625126 78676216 - MGP_CBAJ_P0040773 Slc45a4 protein_coding protein_coding MGP_CBAJ_T0040774.1 MGP_CBAJ_G0021627.1 mouse_genomes_project 15 78625481 78672476 - Slc45a4 protein_coding processed_transcript MGP_CBAJ_T0042035.1 MGP_CBAJ_G0021992.1 mouse_genomes_project 15 107127819 107129145 - MGP_CBAJ_P0042035 H1fnt protein_coding protein_coding MGP_CBAJ_T0012917.1 MGP_CBAJ_G0011029.1 mouse_genomes_project 15 66150807 66151919 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0041671.1 MGP_CBAJ_G0021884.1 mouse_genomes_project 15 91736703 91812169 - MGP_CBAJ_P0041671 Phf21b protein_coding protein_coding MGP_CBAJ_T0041672.1 MGP_CBAJ_G0021884.1 mouse_genomes_project 15 91736704 91738774 - Phf21b protein_coding processed_transcript MGP_CBAJ_T0041673.1 MGP_CBAJ_G0021884.1 mouse_genomes_project 15 91736706 91813108 - MGP_CBAJ_P0041673 Phf21b protein_coding protein_coding MGP_CBAJ_T0041674.1 MGP_CBAJ_G0021884.1 mouse_genomes_project 15 91737455 91812810 - MGP_CBAJ_P0041674 Phf21b protein_coding nonsense_mediated_decay MGP_CBAJ_T0041675.1 MGP_CBAJ_G0021884.1 mouse_genomes_project 15 91738695 91742773 - Phf21b protein_coding retained_intron MGP_CBAJ_T0041676.1 MGP_CBAJ_G0021884.1 mouse_genomes_project 15 91745829 91754785 - Phf21b protein_coding retained_intron MGP_CBAJ_T0009965.1 MGP_CBAJ_G0008103.1 mouse_genomes_project 15 96954564 96954639 - Mir6959 miRNA miRNA MGP_CBAJ_T0042328.1 MGP_CBAJ_G0022103.1 mouse_genomes_project 15 111963374 111983405 + MGP_CBAJ_P0042328 Soat2 protein_coding protein_coding MGP_CBAJ_T0042329.1 MGP_CBAJ_G0022103.1 mouse_genomes_project 15 111963968 111983063 + MGP_CBAJ_P0042329 Soat2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0100172.1 MGP_CBAJ_G0038427.1 mouse_genomes_project 15 61601396 61601523 + Gm22488 snoRNA snoRNA MGP_CBAJ_T0012910.1 MGP_CBAJ_G0011022.1 mouse_genomes_project 15 49929962 49934178 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009910.1 MGP_CBAJ_G0008048.1 mouse_genomes_project 15 25795462 25795523 + Mir7212 miRNA miRNA MGP_CBAJ_T0041571.1 MGP_CBAJ_G0021856.1 mouse_genomes_project 15 89388683 89392786 - MGP_CBAJ_P0041571 Cyp2d26 protein_coding protein_coding MGP_CBAJ_T0041690.1 MGP_CBAJ_G0021894.1 mouse_genomes_project 15 92580175 92594111 - MGP_CBAJ_P0041690 7530416G11Rik protein_coding protein_coding MGP_CBAJ_T0041042.1 MGP_CBAJ_G0021698.1 mouse_genomes_project 15 81897829 81922258 - MGP_CBAJ_P0041042 Bop1 protein_coding protein_coding MGP_CBAJ_T0041568.1 MGP_CBAJ_G0021853.1 mouse_genomes_project 15 89219440 89221059 - MGP_CBAJ_P0041568 unknown_likely_coding unknown_likely_coding MGP_CBAJ_T0041683.1 MGP_CBAJ_G0021889.1 mouse_genomes_project 15 92019366 92047804 + MGP_CBAJ_P0041683 Fam118a protein_coding protein_coding MGP_CBAJ_T0041974.1 MGP_CBAJ_G0021980.1 mouse_genomes_project 15 106545886 106573666 - MGP_CBAJ_P0041974 Rapgef3 protein_coding protein_coding MGP_CBAJ_T0041975.1 MGP_CBAJ_G0021980.1 mouse_genomes_project 15 106546069 106573618 - MGP_CBAJ_P0041975 Rapgef3 protein_coding protein_coding MGP_CBAJ_T0041976.1 MGP_CBAJ_G0021980.1 mouse_genomes_project 15 106546072 106573484 - MGP_CBAJ_P0041976 Rapgef3 protein_coding protein_coding MGP_CBAJ_T0041977.1 MGP_CBAJ_G0021980.1 mouse_genomes_project 15 106546132 106572882 - MGP_CBAJ_P0041977 Rapgef3 protein_coding protein_coding MGP_CBAJ_T0041978.1 MGP_CBAJ_G0021980.1 mouse_genomes_project 15 106546280 106573486 - MGP_CBAJ_P0041978 Rapgef3 protein_coding protein_coding MGP_CBAJ_T0041979.1 MGP_CBAJ_G0021980.1 mouse_genomes_project 15 106546397 106573240 - MGP_CBAJ_P0041979 Rapgef3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041980.1 MGP_CBAJ_G0021980.1 mouse_genomes_project 15 106546480 106549981 - Rapgef3 protein_coding retained_intron MGP_CBAJ_T0041981.1 MGP_CBAJ_G0021980.1 mouse_genomes_project 15 106547635 106573407 - Rapgef3 protein_coding retained_intron MGP_CBAJ_T0041982.1 MGP_CBAJ_G0021980.1 mouse_genomes_project 15 106550815 106551813 - Rapgef3 protein_coding retained_intron MGP_CBAJ_T0041983.1 MGP_CBAJ_G0021980.1 mouse_genomes_project 15 106551465 106561925 - Rapgef3 protein_coding retained_intron MGP_CBAJ_T0041985.1 MGP_CBAJ_G0021980.1 mouse_genomes_project 15 106563319 106564848 - Rapgef3 protein_coding processed_transcript MGP_CBAJ_T0041986.1 MGP_CBAJ_G0021980.1 mouse_genomes_project 15 106563781 106572866 - MGP_CBAJ_P0041986 Rapgef3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041987.1 MGP_CBAJ_G0021980.1 mouse_genomes_project 15 106563786 106566301 - Rapgef3 protein_coding processed_transcript MGP_CBAJ_T0041988.1 MGP_CBAJ_G0021980.1 mouse_genomes_project 15 106565096 106573084 - MGP_CBAJ_P0041988 Rapgef3 protein_coding protein_coding MGP_CBAJ_T0041989.1 MGP_CBAJ_G0021980.1 mouse_genomes_project 15 106565119 106566276 - Rapgef3 protein_coding retained_intron MGP_CBAJ_T0041990.1 MGP_CBAJ_G0021980.1 mouse_genomes_project 15 106572678 106573792 - MGP_CBAJ_P0041990 Rapgef3 protein_coding protein_coding MGP_CBAJ_T0042299.1 MGP_CBAJ_G0022079.1 mouse_genomes_project 15 111107308 111115305 - MGP_CBAJ_P0042299 Krt81 protein_coding protein_coding MGP_CBAJ_T0040134.1 MGP_CBAJ_G0021412.1 mouse_genomes_project 15 4033765 4096723 - MGP_CBAJ_P0040134 Osmr protein_coding protein_coding MGP_CBAJ_T0040135.1 MGP_CBAJ_G0021412.1 mouse_genomes_project 15 4035225 4096723 - MGP_CBAJ_P0040135 Osmr protein_coding protein_coding MGP_CBAJ_T0040136.1 MGP_CBAJ_G0021412.1 mouse_genomes_project 15 4040840 4044743 - Osmr protein_coding retained_intron MGP_CBAJ_T0040137.1 MGP_CBAJ_G0021412.1 mouse_genomes_project 15 4055729 4096022 - Osmr protein_coding retained_intron MGP_CBAJ_T0040138.1 MGP_CBAJ_G0021412.1 mouse_genomes_project 15 4062939 4096011 - Osmr protein_coding retained_intron MGP_CBAJ_T0040139.1 MGP_CBAJ_G0021412.1 mouse_genomes_project 15 4073972 4096050 - Osmr protein_coding retained_intron MGP_CBAJ_T0012891.1 MGP_CBAJ_G0011003.1 mouse_genomes_project 15 6387289 6396210 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017218.1 MGP_CBAJ_G0015048.1 mouse_genomes_project 15 96682241 96685350 - 1810021B22Rik processed_transcript lincRNA MGP_CBAJ_T0017219.1 MGP_CBAJ_G0015048.1 mouse_genomes_project 15 96682241 96686202 - 1810021B22Rik processed_transcript antisense MGP_CBAJ_T0017220.1 MGP_CBAJ_G0015048.1 mouse_genomes_project 15 96682243 96686905 - 1810021B22Rik processed_transcript lincRNA MGP_CBAJ_T0017221.1 MGP_CBAJ_G0015048.1 mouse_genomes_project 15 96682243 96686264 - 1810021B22Rik processed_transcript antisense MGP_CBAJ_T0017222.1 MGP_CBAJ_G0015048.1 mouse_genomes_project 15 96682243 96686202 - 1810021B22Rik processed_transcript antisense MGP_CBAJ_T0040508.1 MGP_CBAJ_G0021538.1 mouse_genomes_project 15 45997844 46048685 + MGP_CBAJ_P0040508 Trhr protein_coding protein_coding MGP_CBAJ_T0040509.1 MGP_CBAJ_G0021538.1 mouse_genomes_project 15 45997942 46046940 + MGP_CBAJ_P0040509 Trhr protein_coding protein_coding MGP_CBAJ_T0100155.1 MGP_CBAJ_G0038410.1 mouse_genomes_project 15 30239103 30239281 - Gm26163 snoRNA snoRNA MGP_CBAJ_T0041554.1 MGP_CBAJ_G0021846.1 mouse_genomes_project 15 88802737 88812845 + Smdt1 protein_coding processed_transcript MGP_CBAJ_T0041557.1 MGP_CBAJ_G0021846.1 mouse_genomes_project 15 88804760 88812793 + Smdt1 protein_coding processed_transcript MGP_CBAJ_T0041559.1 MGP_CBAJ_G0021846.1 mouse_genomes_project 15 88809734 88812876 + MGP_CBAJ_P0041559 Smdt1 protein_coding protein_coding MGP_CBAJ_T0041560.1 MGP_CBAJ_G0021846.1 mouse_genomes_project 15 88809794 88812877 + MGP_CBAJ_P0041560 Smdt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041561.1 MGP_CBAJ_G0021846.1 mouse_genomes_project 15 88811000 88812655 + MGP_CBAJ_P0041561 Smdt1 protein_coding protein_coding MGP_CBAJ_T0041612.1 MGP_CBAJ_G0021865.1 mouse_genomes_project 15 90075038 90143991 - MGP_CBAJ_P0041612 Pacsin2 protein_coding protein_coding MGP_CBAJ_T0041613.1 MGP_CBAJ_G0021865.1 mouse_genomes_project 15 90075038 90180163 - MGP_CBAJ_P0041613 Pacsin2 protein_coding protein_coding MGP_CBAJ_T0041614.1 MGP_CBAJ_G0021865.1 mouse_genomes_project 15 90075553 90180127 - MGP_CBAJ_P0041614 Pacsin2 protein_coding protein_coding MGP_CBAJ_T0006705.1 MGP_CBAJ_G0005524.1 mouse_genomes_project 15 104696762 104860058 - 2610037D02Rik lincRNA lincRNA MGP_CBAJ_T0006709.1 MGP_CBAJ_G0005524.1 mouse_genomes_project 15 104857948 104860946 - 2610037D02Rik lincRNA lincRNA MGP_CBAJ_T0040100.1 MGP_CBAJ_G0021404.1 mouse_genomes_project 15 2147665 2151063 - MGP_CBAJ_P0040100 Gm10250 protein_coding protein_coding MGP_CBAJ_T0017201.1 MGP_CBAJ_G0015037.1 mouse_genomes_project 15 64604470 64610831 + 9930014A18Rik processed_transcript antisense MGP_CBAJ_T0017202.1 MGP_CBAJ_G0015037.1 mouse_genomes_project 15 64605151 64607808 + 9930014A18Rik processed_transcript TEC MGP_CBAJ_T0017203.1 MGP_CBAJ_G0015037.1 mouse_genomes_project 15 64605600 64606138 + 9930014A18Rik processed_transcript antisense MGP_CBAJ_T0017204.1 MGP_CBAJ_G0015037.1 mouse_genomes_project 15 64606539 64613974 + 9930014A18Rik processed_transcript antisense MGP_CBAJ_T0040695.1 MGP_CBAJ_G0021606.1 mouse_genomes_project 15 70196365 70230481 - MGP_CBAJ_P0040695 Oc90 protein_coding protein_coding MGP_CBAJ_T0040696.1 MGP_CBAJ_G0021606.1 mouse_genomes_project 15 70196365 70230624 - MGP_CBAJ_P0040696 Oc90 protein_coding protein_coding MGP_CBAJ_T0040697.1 MGP_CBAJ_G0021606.1 mouse_genomes_project 15 70196365 70219979 - MGP_CBAJ_P0040697 Oc90 protein_coding protein_coding MGP_CBAJ_T0040698.1 MGP_CBAJ_G0021606.1 mouse_genomes_project 15 70196704 70210975 - MGP_CBAJ_P0040698 Oc90 protein_coding protein_coding MGP_CBAJ_T0040699.1 MGP_CBAJ_G0021606.1 mouse_genomes_project 15 70196832 70208151 - MGP_CBAJ_P0040699 Oc90 protein_coding protein_coding MGP_CBAJ_T0040847.1 MGP_CBAJ_G0021653.1 mouse_genomes_project 15 80485127 80490693 + MGP_CBAJ_P0040847 BC025446 protein_coding protein_coding MGP_CBAJ_T0040848.1 MGP_CBAJ_G0021653.1 mouse_genomes_project 15 80485347 80491406 + MGP_CBAJ_P0040848 BC025446 protein_coding protein_coding MGP_CBAJ_T0042307.1 MGP_CBAJ_G0022087.1 mouse_genomes_project 15 111497476 111508762 - MGP_CBAJ_P0042307 Krt74 protein_coding protein_coding MGP_CBAJ_T0042052.1 MGP_CBAJ_G0022001.1 mouse_genomes_project 15 107443890 107452672 + MGP_CBAJ_P0042052 Olfr279 protein_coding protein_coding MGP_CBAJ_T0042053.1 MGP_CBAJ_G0022001.1 mouse_genomes_project 15 107451739 107452672 + MGP_CBAJ_P0042053 Olfr279 protein_coding protein_coding MGP_CBAJ_T0042173.1 MGP_CBAJ_G0022042.1 mouse_genomes_project 15 108968552 108975997 + MGP_CBAJ_P0042173 Gpd1 protein_coding protein_coding MGP_CBAJ_T0042174.1 MGP_CBAJ_G0022042.1 mouse_genomes_project 15 108968616 108974784 + MGP_CBAJ_P0042174 Gpd1 protein_coding protein_coding MGP_CBAJ_T0042175.1 MGP_CBAJ_G0022042.1 mouse_genomes_project 15 108971032 108973074 + Gpd1 protein_coding retained_intron MGP_CBAJ_T0009955.1 MGP_CBAJ_G0008093.1 mouse_genomes_project 15 89579065 89579144 - Mir3080 miRNA miRNA MGP_CBAJ_T0041354.1 MGP_CBAJ_G0021791.1 mouse_genomes_project 15 85868485 85878802 - MGP_CBAJ_P0041354 Cbx6 protein_coding protein_coding MGP_CBAJ_T0041355.1 MGP_CBAJ_G0021791.1 mouse_genomes_project 15 85870722 85878828 - MGP_CBAJ_P0041355 Cbx6 protein_coding protein_coding MGP_CBAJ_T0041356.1 MGP_CBAJ_G0021791.1 mouse_genomes_project 15 85873217 85878389 - Cbx6 protein_coding processed_transcript MGP_CBAJ_T0041357.1 MGP_CBAJ_G0021791.1 mouse_genomes_project 15 85873358 85878871 - MGP_CBAJ_P0041357 Cbx6 protein_coding protein_coding MGP_CBAJ_T0041358.1 MGP_CBAJ_G0021791.1 mouse_genomes_project 15 85877162 85878916 - Cbx6 protein_coding processed_transcript MGP_CBAJ_T0041359.1 MGP_CBAJ_G0021791.1 mouse_genomes_project 15 85877835 85878865 - Cbx6 protein_coding processed_transcript MGP_CBAJ_T0041552.1 MGP_CBAJ_G0021844.1 mouse_genomes_project 15 88790080 88802605 - MGP_CBAJ_P0041552 Naga protein_coding protein_coding MGP_CBAJ_T0006657.1 MGP_CBAJ_G0005494.1 mouse_genomes_project 15 39393402 39397833 - lincRNA lincRNA MGP_CBAJ_T0098891.1 MGP_CBAJ_G0037146.1 mouse_genomes_project 15 46275674 46275781 + Gm22392 snRNA snRNA MGP_CBAJ_T0040286.1 MGP_CBAJ_G0021454.1 mouse_genomes_project 15 15314406 15422678 + MGP_CBAJ_P0040286 Cdh9 protein_coding protein_coding MGP_CBAJ_T0042435.1 MGP_CBAJ_G0022128.1 mouse_genomes_project 15 112918517 112921799 + MGP_CBAJ_P0042435 Hoxc11 protein_coding protein_coding MGP_CBAJ_T0040401.1 MGP_CBAJ_G0021499.1 mouse_genomes_project 15 36734110 36744498 - MGP_CBAJ_P0040401 Cox6c protein_coding nonsense_mediated_decay MGP_CBAJ_T0040402.1 MGP_CBAJ_G0021499.1 mouse_genomes_project 15 36740200 36747413 - MGP_CBAJ_P0040402 Cox6c protein_coding protein_coding MGP_CBAJ_T0040403.1 MGP_CBAJ_G0021499.1 mouse_genomes_project 15 36740204 36746812 - MGP_CBAJ_P0040403 Cox6c protein_coding protein_coding MGP_CBAJ_T0040404.1 MGP_CBAJ_G0021499.1 mouse_genomes_project 15 36740207 36747374 - Cox6c protein_coding retained_intron MGP_CBAJ_T0040405.1 MGP_CBAJ_G0021499.1 mouse_genomes_project 15 36744553 36747176 - MGP_CBAJ_P0040405 Cox6c protein_coding protein_coding MGP_CBAJ_T0041485.1 MGP_CBAJ_G0021821.1 mouse_genomes_project 15 88087612 88147875 + MGP_CBAJ_P0041485 Zc3h7b protein_coding protein_coding MGP_CBAJ_T0100154.1 MGP_CBAJ_G0038409.1 mouse_genomes_project 15 30172410 30172488 - Gm23327 snoRNA snoRNA MGP_CBAJ_T0006644.1 MGP_CBAJ_G0005485.1 mouse_genomes_project 15 8355657 8439193 + 4930556M19Rik lincRNA lincRNA MGP_CBAJ_T0040227.1 MGP_CBAJ_G0021435.1 mouse_genomes_project 15 8093498 8101170 + MGP_CBAJ_P0040227 Rad1 protein_coding protein_coding MGP_CBAJ_T0040228.1 MGP_CBAJ_G0021435.1 mouse_genomes_project 15 8093529 8101165 + Rad1 protein_coding retained_intron MGP_CBAJ_T0040229.1 MGP_CBAJ_G0021435.1 mouse_genomes_project 15 8093549 8108562 + MGP_CBAJ_P0040229 Rad1 protein_coding protein_coding MGP_CBAJ_T0040230.1 MGP_CBAJ_G0021435.1 mouse_genomes_project 15 8093560 8097828 + MGP_CBAJ_P0040230 Rad1 protein_coding protein_coding MGP_CBAJ_T0040231.1 MGP_CBAJ_G0021435.1 mouse_genomes_project 15 8093955 8100844 + MGP_CBAJ_P0040231 Rad1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040232.1 MGP_CBAJ_G0021435.1 mouse_genomes_project 15 8094089 8101155 + MGP_CBAJ_P0040232 Rad1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012890.1 MGP_CBAJ_G0011002.1 mouse_genomes_project 15 6383975 6384795 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012903.1 MGP_CBAJ_G0011015.1 mouse_genomes_project 15 38547365 38547838 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009942.1 MGP_CBAJ_G0008080.1 mouse_genomes_project 15 86188898 86189006 - Snord43 miRNA miRNA MGP_CBAJ_T0041991.1 MGP_CBAJ_G0021981.1 mouse_genomes_project 15 106590053 106598379 + MGP_CBAJ_P0041991 Slc48a1 protein_coding protein_coding MGP_CBAJ_T0041992.1 MGP_CBAJ_G0021981.1 mouse_genomes_project 15 106590126 106595653 + MGP_CBAJ_P0041992 Slc48a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040924.1 MGP_CBAJ_G0021677.1 mouse_genomes_project 15 81402631 81415867 - MGP_CBAJ_P0040924 Fam83h protein_coding protein_coding MGP_CBAJ_T0040925.1 MGP_CBAJ_G0021677.1 mouse_genomes_project 15 81402631 81411036 - MGP_CBAJ_P0040925 Fam83h protein_coding protein_coding MGP_CBAJ_T0041405.1 MGP_CBAJ_G0021806.1 mouse_genomes_project 15 86914454 87160923 + MGP_CBAJ_P0041405 Tnrc6b protein_coding protein_coding MGP_CBAJ_T0041406.1 MGP_CBAJ_G0021806.1 mouse_genomes_project 15 86976738 87149317 + MGP_CBAJ_P0041406 Tnrc6b protein_coding unknown_likely_coding MGP_CBAJ_T0041385.1 MGP_CBAJ_G0021796.1 mouse_genomes_project 15 86207812 86241278 + MGP_CBAJ_P0041385 Syngr1 protein_coding protein_coding MGP_CBAJ_T0041386.1 MGP_CBAJ_G0021796.1 mouse_genomes_project 15 86207822 86247338 + MGP_CBAJ_P0041386 Syngr1 protein_coding protein_coding MGP_CBAJ_T0041387.1 MGP_CBAJ_G0021796.1 mouse_genomes_project 15 86218983 86239499 + MGP_CBAJ_P0041387 Syngr1 protein_coding protein_coding MGP_CBAJ_T0041388.1 MGP_CBAJ_G0021796.1 mouse_genomes_project 15 86243309 86244102 + MGP_CBAJ_P0041388 Syngr1 protein_coding protein_coding MGP_CBAJ_T0012925.1 MGP_CBAJ_G0011037.1 mouse_genomes_project 15 82286416 82286771 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097776.1 MGP_CBAJ_G0036049.1 mouse_genomes_project 15 81310330 81312719 + pseudogene pseudogene MGP_CBAJ_T0006689.1 MGP_CBAJ_G0005514.1 mouse_genomes_project 15 88152396 88154216 - Gm17597 lincRNA lincRNA MGP_CBAJ_T0040557.1 MGP_CBAJ_G0021558.1 mouse_genomes_project 15 57717825 57753324 + MGP_CBAJ_P0040557 Mal2 protein_coding protein_coding MGP_CBAJ_T0041225.1 MGP_CBAJ_G0021758.1 mouse_genomes_project 15 84758914 84775830 + MGP_CBAJ_P0041225 Gga1 protein_coding protein_coding MGP_CBAJ_T0041797.1 MGP_CBAJ_G0021926.1 mouse_genomes_project 15 96937544 96964215 - MGP_CBAJ_P0041797 Sbf1 protein_coding protein_coding MGP_CBAJ_T0041798.1 MGP_CBAJ_G0021926.1 mouse_genomes_project 15 96937591 96964159 - MGP_CBAJ_P0041798 Sbf1 protein_coding protein_coding MGP_CBAJ_T0041799.1 MGP_CBAJ_G0021926.1 mouse_genomes_project 15 96937594 96964175 - MGP_CBAJ_P0041799 Sbf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041800.1 MGP_CBAJ_G0021926.1 mouse_genomes_project 15 96937595 96943469 - MGP_CBAJ_P0041800 Sbf1 protein_coding protein_coding MGP_CBAJ_T0041801.1 MGP_CBAJ_G0021926.1 mouse_genomes_project 15 96937864 96938267 - Sbf1 protein_coding retained_intron MGP_CBAJ_T0041802.1 MGP_CBAJ_G0021926.1 mouse_genomes_project 15 96937934 96945640 - MGP_CBAJ_P0041802 Sbf1 protein_coding unknown_likely_coding MGP_CBAJ_T0041803.1 MGP_CBAJ_G0021926.1 mouse_genomes_project 15 96939043 96942982 - Sbf1 protein_coding retained_intron MGP_CBAJ_T0041804.1 MGP_CBAJ_G0021926.1 mouse_genomes_project 15 96943172 96944823 - Sbf1 protein_coding retained_intron MGP_CBAJ_T0041805.1 MGP_CBAJ_G0021926.1 mouse_genomes_project 15 96948623 96949367 - Sbf1 protein_coding retained_intron MGP_CBAJ_T0041806.1 MGP_CBAJ_G0021926.1 mouse_genomes_project 15 96949461 96951537 - Sbf1 protein_coding retained_intron MGP_CBAJ_T0041807.1 MGP_CBAJ_G0021926.1 mouse_genomes_project 15 96951189 96952241 - MGP_CBAJ_P0041807 Sbf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041808.1 MGP_CBAJ_G0021926.1 mouse_genomes_project 15 96951999 96954002 - Sbf1 protein_coding retained_intron MGP_CBAJ_T0041809.1 MGP_CBAJ_G0021926.1 mouse_genomes_project 15 96953794 96955524 - Sbf1 protein_coding retained_intron MGP_CBAJ_T0041810.1 MGP_CBAJ_G0021926.1 mouse_genomes_project 15 96954917 96956707 - MGP_CBAJ_P0041810 Sbf1 protein_coding protein_coding MGP_CBAJ_T0009924.1 MGP_CBAJ_G0008062.1 mouse_genomes_project 15 56664843 56664918 - Mir28c miRNA miRNA MGP_CBAJ_T0003547.1 MGP_CBAJ_G0003215.1 mouse_genomes_project 15 93302221 93305142 - Gm15722 antisense antisense MGP_CBAJ_T0101047.1 MGP_CBAJ_G0039272.1 mouse_genomes_project 15 33893606 33895554 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101048.1 MGP_CBAJ_G0039272.1 mouse_genomes_project 15 33894782 33895517 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0040853.1 MGP_CBAJ_G0021657.1 mouse_genomes_project 15 80543297 80547038 + MGP_CBAJ_P0040853 protein_coding protein_coding MGP_CBAJ_T0040861.1 MGP_CBAJ_G0021657.1 mouse_genomes_project 15 80543471 80547039 + MGP_CBAJ_P0040861 protein_coding protein_coding MGP_CBAJ_T0041099.1 MGP_CBAJ_G0021714.1 mouse_genomes_project 15 82186444 82189142 + MGP_CBAJ_P0041099 Mfsd3 protein_coding protein_coding MGP_CBAJ_T0041206.1 MGP_CBAJ_G0021747.1 mouse_genomes_project 15 84256989 84285958 - MGP_CBAJ_P0041206 Tmprss6 protein_coding protein_coding MGP_CBAJ_T0100175.1 MGP_CBAJ_G0038430.1 mouse_genomes_project 15 66701561 66701695 + Gm22521 snoRNA snoRNA MGP_CBAJ_T0042032.1 MGP_CBAJ_G0021990.1 mouse_genomes_project 15 107022317 107024646 + MGP_CBAJ_P0042032 Ccdc184 protein_coding protein_coding MGP_CBAJ_T0012892.1 MGP_CBAJ_G0011004.1 mouse_genomes_project 15 8139689 8140948 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012929.1 MGP_CBAJ_G0011041.1 mouse_genomes_project 15 87178341 87178736 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0041853.1 MGP_CBAJ_G0021939.1 mouse_genomes_project 15 97138619 97149130 + MGP_CBAJ_P0041853 Mapk8ip2 protein_coding protein_coding MGP_CBAJ_T0041854.1 MGP_CBAJ_G0021939.1 mouse_genomes_project 15 97139761 97141377 + MGP_CBAJ_P0041854 Mapk8ip2 protein_coding protein_coding MGP_CBAJ_T0040372.1 MGP_CBAJ_G0021487.1 mouse_genomes_project 15 34811462 34870585 + MGP_CBAJ_P0040372 Laptm4b protein_coding protein_coding MGP_CBAJ_T0042355.1 MGP_CBAJ_G0022111.1 mouse_genomes_project 15 112195542 112203169 + MGP_CBAJ_P0042355 Myg1 protein_coding protein_coding MGP_CBAJ_T0042356.1 MGP_CBAJ_G0022111.1 mouse_genomes_project 15 112195553 112196430 + Myg1 protein_coding retained_intron MGP_CBAJ_T0042357.1 MGP_CBAJ_G0022111.1 mouse_genomes_project 15 112195571 112202826 + Myg1 protein_coding retained_intron MGP_CBAJ_T0042358.1 MGP_CBAJ_G0022111.1 mouse_genomes_project 15 112195583 112202809 + MGP_CBAJ_P0042358 Myg1 protein_coding protein_coding MGP_CBAJ_T0042359.1 MGP_CBAJ_G0022111.1 mouse_genomes_project 15 112195588 112202721 + MGP_CBAJ_P0042359 Myg1 protein_coding protein_coding MGP_CBAJ_T0042360.1 MGP_CBAJ_G0022111.1 mouse_genomes_project 15 112195750 112202170 + Myg1 protein_coding retained_intron MGP_CBAJ_T0042361.1 MGP_CBAJ_G0022111.1 mouse_genomes_project 15 112196263 112201852 + Myg1 protein_coding processed_transcript MGP_CBAJ_T0042362.1 MGP_CBAJ_G0022111.1 mouse_genomes_project 15 112197473 112201876 + Myg1 protein_coding retained_intron MGP_CBAJ_T0042363.1 MGP_CBAJ_G0022111.1 mouse_genomes_project 15 112201745 112202826 + Myg1 protein_coding retained_intron MGP_CBAJ_T0042364.1 MGP_CBAJ_G0022111.1 mouse_genomes_project 15 112202007 112202765 + Myg1 protein_coding retained_intron MGP_CBAJ_T0042066.1 MGP_CBAJ_G0022005.1 mouse_genomes_project 15 107577914 107595971 - MGP_CBAJ_P0042066 Adcy6 protein_coding unknown_likely_coding MGP_CBAJ_T0042067.1 MGP_CBAJ_G0022005.1 mouse_genomes_project 15 107577922 107596060 - MGP_CBAJ_P0042067 Adcy6 protein_coding protein_coding MGP_CBAJ_T0040738.1 MGP_CBAJ_G0021617.1 mouse_genomes_project 15 72539489 72723507 - MGP_CBAJ_P0040738 Zfat protein_coding protein_coding MGP_CBAJ_T0040739.1 MGP_CBAJ_G0021617.1 mouse_genomes_project 15 72540044 72723438 - MGP_CBAJ_P0040739 Zfat protein_coding protein_coding MGP_CBAJ_T0040740.1 MGP_CBAJ_G0021617.1 mouse_genomes_project 15 72540045 72723489 - MGP_CBAJ_P0040740 Zfat protein_coding protein_coding MGP_CBAJ_T0040741.1 MGP_CBAJ_G0021617.1 mouse_genomes_project 15 72635562 72723498 - MGP_CBAJ_P0040741 Zfat protein_coding protein_coding MGP_CBAJ_T0040742.1 MGP_CBAJ_G0021617.1 mouse_genomes_project 15 72681434 72723500 - Zfat protein_coding retained_intron MGP_CBAJ_T0097959.1 MGP_CBAJ_G0036232.1 mouse_genomes_project 15 10924430 10924530 + Gm24664 rRNA rRNA MGP_CBAJ_T0041965.1 MGP_CBAJ_G0021973.1 mouse_genomes_project 15 105328102 105340393 - MGP_CBAJ_P0041965 Slc38a2 protein_coding protein_coding MGP_CBAJ_T0042087.1 MGP_CBAJ_G0022014.1 mouse_genomes_project 15 107845364 107853373 - MGP_CBAJ_P0042087 Ddn protein_coding protein_coding MGP_CBAJ_T0040214.1 MGP_CBAJ_G0021432.1 mouse_genomes_project 15 7944025 7965164 + MGP_CBAJ_P0040214 Agxt2 protein_coding protein_coding MGP_CBAJ_T0040215.1 MGP_CBAJ_G0021432.1 mouse_genomes_project 15 7944030 8004287 + MGP_CBAJ_P0040215 Agxt2 protein_coding protein_coding MGP_CBAJ_T0040216.1 MGP_CBAJ_G0021432.1 mouse_genomes_project 15 7944030 7972267 + MGP_CBAJ_P0040216 Agxt2 protein_coding protein_coding MGP_CBAJ_T0040217.1 MGP_CBAJ_G0021432.1 mouse_genomes_project 15 7944072 8003872 + MGP_CBAJ_P0040217 Agxt2 protein_coding protein_coding MGP_CBAJ_T0041088.1 MGP_CBAJ_G0021712.1 mouse_genomes_project 15 82155704 82175699 + protein_coding processed_transcript MGP_CBAJ_T0041089.1 MGP_CBAJ_G0021712.1 mouse_genomes_project 15 82155723 82179557 + MGP_CBAJ_P0041089 protein_coding unknown_likely_coding MGP_CBAJ_T0041090.1 MGP_CBAJ_G0021712.1 mouse_genomes_project 15 82174070 82175246 + protein_coding processed_transcript MGP_CBAJ_T0041091.1 MGP_CBAJ_G0021712.1 mouse_genomes_project 15 82175296 82179804 + protein_coding retained_intron MGP_CBAJ_T0041092.1 MGP_CBAJ_G0021712.1 mouse_genomes_project 15 82175418 82179800 + MGP_CBAJ_P0041092 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041093.1 MGP_CBAJ_G0021712.1 mouse_genomes_project 15 82176322 82178234 + protein_coding retained_intron MGP_CBAJ_T0041094.1 MGP_CBAJ_G0021712.1 mouse_genomes_project 15 82176337 82178398 + MGP_CBAJ_P0041094 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041095.1 MGP_CBAJ_G0021712.1 mouse_genomes_project 15 82176580 82177378 + protein_coding retained_intron MGP_CBAJ_T0041096.1 MGP_CBAJ_G0021712.1 mouse_genomes_project 15 82177692 82179804 + protein_coding retained_intron MGP_CBAJ_T0041097.1 MGP_CBAJ_G0021712.1 mouse_genomes_project 15 82177801 82179804 + protein_coding retained_intron MGP_CBAJ_T0100187.1 MGP_CBAJ_G0038442.1 mouse_genomes_project 15 107498559 107498696 - Snora2b snoRNA snoRNA MGP_CBAJ_T0040491.1 MGP_CBAJ_G0021528.1 mouse_genomes_project 15 41213636 41287330 - MGP_CBAJ_P0040491 Lrp12 protein_coding protein_coding MGP_CBAJ_T0040492.1 MGP_CBAJ_G0021528.1 mouse_genomes_project 15 41213636 41287124 - MGP_CBAJ_P0040492 Lrp12 protein_coding protein_coding MGP_CBAJ_T0040493.1 MGP_CBAJ_G0021528.1 mouse_genomes_project 15 41246828 41287042 - Lrp12 protein_coding retained_intron MGP_CBAJ_T0040578.1 MGP_CBAJ_G0021566.1 mouse_genomes_project 15 58724337 58747685 - MGP_CBAJ_P0040578 Mrpl13 protein_coding protein_coding MGP_CBAJ_T0040579.1 MGP_CBAJ_G0021566.1 mouse_genomes_project 15 58724337 58747286 - MGP_CBAJ_P0040579 Mrpl13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040580.1 MGP_CBAJ_G0021566.1 mouse_genomes_project 15 58728879 58738401 - MGP_CBAJ_P0040580 Mrpl13 protein_coding protein_coding MGP_CBAJ_T0040581.1 MGP_CBAJ_G0021566.1 mouse_genomes_project 15 58733114 58747220 - Mrpl13 protein_coding retained_intron MGP_CBAJ_T0040582.1 MGP_CBAJ_G0021566.1 mouse_genomes_project 15 58739692 58747212 - Mrpl13 protein_coding retained_intron MGP_CBAJ_T0042094.1 MGP_CBAJ_G0022017.1 mouse_genomes_project 15 107930036 107933664 - MGP_CBAJ_P0042094 Rhebl1 protein_coding protein_coding MGP_CBAJ_T0042095.1 MGP_CBAJ_G0022017.1 mouse_genomes_project 15 107930304 107933350 - Rhebl1 protein_coding processed_transcript MGP_CBAJ_T0042096.1 MGP_CBAJ_G0022017.1 mouse_genomes_project 15 107931791 107933006 - Rhebl1 protein_coding retained_intron MGP_CBAJ_T0041750.1 MGP_CBAJ_G0021914.1 mouse_genomes_project 15 96566679 96590931 - MGP_CBAJ_P0041750 Mlc1 protein_coding protein_coding MGP_CBAJ_T0041751.1 MGP_CBAJ_G0021914.1 mouse_genomes_project 15 96566679 96590931 - MGP_CBAJ_P0041751 Mlc1 protein_coding protein_coding MGP_CBAJ_T0100163.1 MGP_CBAJ_G0038418.1 mouse_genomes_project 15 40238750 40238881 + Gm24789 snoRNA snoRNA MGP_CBAJ_T0042302.1 MGP_CBAJ_G0022082.1 mouse_genomes_project 15 111239125 111251428 - MGP_CBAJ_P0042302 Krt82 protein_coding protein_coding MGP_CBAJ_T0041993.1 MGP_CBAJ_G0021982.1 mouse_genomes_project 15 106598350 106636471 - MGP_CBAJ_P0041993 Hdac7 protein_coding protein_coding MGP_CBAJ_T0041994.1 MGP_CBAJ_G0021982.1 mouse_genomes_project 15 106598367 106636744 - MGP_CBAJ_P0041994 Hdac7 protein_coding protein_coding MGP_CBAJ_T0041995.1 MGP_CBAJ_G0021982.1 mouse_genomes_project 15 106598373 106600135 - Hdac7 protein_coding retained_intron MGP_CBAJ_T0041996.1 MGP_CBAJ_G0021982.1 mouse_genomes_project 15 106598398 106636471 - MGP_CBAJ_P0041996 Hdac7 protein_coding protein_coding MGP_CBAJ_T0041997.1 MGP_CBAJ_G0021982.1 mouse_genomes_project 15 106599386 106636354 - MGP_CBAJ_P0041997 Hdac7 protein_coding protein_coding MGP_CBAJ_T0041998.1 MGP_CBAJ_G0021982.1 mouse_genomes_project 15 106603488 106636446 - MGP_CBAJ_P0041998 Hdac7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041999.1 MGP_CBAJ_G0021982.1 mouse_genomes_project 15 106605298 106612661 - MGP_CBAJ_P0041999 Hdac7 protein_coding protein_coding MGP_CBAJ_T0042000.1 MGP_CBAJ_G0021982.1 mouse_genomes_project 15 106606959 106613012 - MGP_CBAJ_P0042000 Hdac7 protein_coding protein_coding MGP_CBAJ_T0040462.1 MGP_CBAJ_G0021515.1 mouse_genomes_project 15 39078469 39194482 - MGP_CBAJ_P0040462 Ubr5 protein_coding unknown_likely_coding MGP_CBAJ_T0040463.1 MGP_CBAJ_G0021515.1 mouse_genomes_project 15 39078471 39194910 - MGP_CBAJ_P0040463 Ubr5 protein_coding protein_coding MGP_CBAJ_T0041024.1 MGP_CBAJ_G0021696.1 mouse_genomes_project 15 81807205 81810186 - MGP_CBAJ_P0041024 Tssk5 protein_coding protein_coding MGP_CBAJ_T0006664.1 MGP_CBAJ_G0005501.1 mouse_genomes_project 15 45162022 45212350 - Gm10373 lincRNA lincRNA MGP_CBAJ_T0040213.1 MGP_CBAJ_G0021431.1 mouse_genomes_project 15 7895299 7964530 + MGP_CBAJ_P0040213 Gm21973 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041691.1 MGP_CBAJ_G0021895.1 mouse_genomes_project 15 92636139 92678008 - MGP_CBAJ_P0041691 Wnt7b protein_coding protein_coding MGP_CBAJ_T0041692.1 MGP_CBAJ_G0021895.1 mouse_genomes_project 15 92636143 92682221 - MGP_CBAJ_P0041692 Wnt7b protein_coding protein_coding MGP_CBAJ_T0040360.1 MGP_CBAJ_G0021484.1 mouse_genomes_project 15 33532612 34104514 + MGP_CBAJ_P0040360 Cpq protein_coding protein_coding MGP_CBAJ_T0041738.1 MGP_CBAJ_G0021909.1 mouse_genomes_project 15 96320636 96353454 + protein_coding processed_transcript MGP_CBAJ_T0040825.1 MGP_CBAJ_G0021647.1 mouse_genomes_project 15 79984831 79995333 - MGP_CBAJ_P0040825 Cyp11b1 protein_coding protein_coding MGP_CBAJ_T0041308.1 MGP_CBAJ_G0021776.1 mouse_genomes_project 15 85332670 85350521 - MGP_CBAJ_P0041308 Tmem184b protein_coding unknown_likely_coding MGP_CBAJ_T0041309.1 MGP_CBAJ_G0021776.1 mouse_genomes_project 15 85332675 85380115 - MGP_CBAJ_P0041309 Tmem184b protein_coding protein_coding MGP_CBAJ_T0041310.1 MGP_CBAJ_G0021776.1 mouse_genomes_project 15 85332675 85379731 - MGP_CBAJ_P0041310 Tmem184b protein_coding protein_coding MGP_CBAJ_T0041779.1 MGP_CBAJ_G0021920.1 mouse_genomes_project 15 96739866 96745221 - Hdac10 protein_coding processed_transcript MGP_CBAJ_T0041780.1 MGP_CBAJ_G0021920.1 mouse_genomes_project 15 96739866 96745268 - MGP_CBAJ_P0041780 Hdac10 protein_coding protein_coding MGP_CBAJ_T0041781.1 MGP_CBAJ_G0021920.1 mouse_genomes_project 15 96739868 96745229 - Hdac10 protein_coding retained_intron MGP_CBAJ_T0041782.1 MGP_CBAJ_G0021920.1 mouse_genomes_project 15 96739868 96745219 - Hdac10 protein_coding retained_intron MGP_CBAJ_T0041783.1 MGP_CBAJ_G0021920.1 mouse_genomes_project 15 96739870 96745247 - Hdac10 protein_coding retained_intron MGP_CBAJ_T0041784.1 MGP_CBAJ_G0021920.1 mouse_genomes_project 15 96740131 96745016 - MGP_CBAJ_P0041784 Hdac10 protein_coding protein_coding MGP_CBAJ_T0041785.1 MGP_CBAJ_G0021920.1 mouse_genomes_project 15 96740233 96742253 - Hdac10 protein_coding processed_transcript MGP_CBAJ_T0041786.1 MGP_CBAJ_G0021920.1 mouse_genomes_project 15 96742546 96744058 - Hdac10 protein_coding processed_transcript MGP_CBAJ_T0006672.1 MGP_CBAJ_G0005506.1 mouse_genomes_project 15 65958195 66180009 + lincRNA lincRNA MGP_CBAJ_T0006673.1 MGP_CBAJ_G0005506.1 mouse_genomes_project 15 65958247 66189088 + lincRNA lincRNA MGP_CBAJ_T0006674.1 MGP_CBAJ_G0005506.1 mouse_genomes_project 15 65958256 66180005 + lincRNA lincRNA MGP_CBAJ_T0006675.1 MGP_CBAJ_G0005506.1 mouse_genomes_project 15 65958259 66306371 + lincRNA lincRNA MGP_CBAJ_T0006676.1 MGP_CBAJ_G0005506.1 mouse_genomes_project 15 65958270 66181459 + lincRNA lincRNA MGP_CBAJ_T0006677.1 MGP_CBAJ_G0005506.1 mouse_genomes_project 15 65959466 66179704 + lincRNA lincRNA MGP_CBAJ_T0006678.1 MGP_CBAJ_G0005506.1 mouse_genomes_project 15 66018892 66029353 + lincRNA lincRNA MGP_CBAJ_T0006679.1 MGP_CBAJ_G0005506.1 mouse_genomes_project 15 66110910 66181461 + lincRNA lincRNA MGP_CBAJ_T0006680.1 MGP_CBAJ_G0005506.1 mouse_genomes_project 15 66150809 66180007 + lincRNA lincRNA MGP_CBAJ_T0006681.1 MGP_CBAJ_G0005506.1 mouse_genomes_project 15 66155191 66172879 + lincRNA lincRNA MGP_CBAJ_T0017189.1 MGP_CBAJ_G0015033.1 mouse_genomes_project 15 17602671 17742050 - C030047K22Rik processed_transcript processed_transcript MGP_CBAJ_T0012918.1 MGP_CBAJ_G0011030.1 mouse_genomes_project 15 66906501 66907933 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098895.1 MGP_CBAJ_G0037150.1 mouse_genomes_project 15 51330008 51330093 - Gm23185 snRNA snRNA MGP_CBAJ_T0040821.1 MGP_CBAJ_G0021645.1 mouse_genomes_project 15 79956889 79967853 - MGP_CBAJ_P0040821 Gml2 protein_coding protein_coding MGP_CBAJ_T0042041.1 MGP_CBAJ_G0021996.1 mouse_genomes_project 15 107308456 107309558 - MGP_CBAJ_P0042041 Olfr283 protein_coding protein_coding MGP_CBAJ_T0042331.1 MGP_CBAJ_G0022105.1 mouse_genomes_project 15 112032808 112047112 + MGP_CBAJ_P0042331 Zfp740 protein_coding protein_coding MGP_CBAJ_T0042332.1 MGP_CBAJ_G0022105.1 mouse_genomes_project 15 112032819 112047105 + MGP_CBAJ_P0042332 Zfp740 protein_coding protein_coding MGP_CBAJ_T0042333.1 MGP_CBAJ_G0022105.1 mouse_genomes_project 15 112032851 112037506 + MGP_CBAJ_P0042333 Zfp740 protein_coding protein_coding MGP_CBAJ_T0042334.1 MGP_CBAJ_G0022105.1 mouse_genomes_project 15 112032869 112038028 + MGP_CBAJ_P0042334 Zfp740 protein_coding protein_coding MGP_CBAJ_T0042335.1 MGP_CBAJ_G0022105.1 mouse_genomes_project 15 112033769 112047113 + MGP_CBAJ_P0042335 Zfp740 protein_coding protein_coding MGP_CBAJ_T0042336.1 MGP_CBAJ_G0022105.1 mouse_genomes_project 15 112033906 112037942 + MGP_CBAJ_P0042336 Zfp740 protein_coding protein_coding MGP_CBAJ_T0042337.1 MGP_CBAJ_G0022105.1 mouse_genomes_project 15 112033940 112037930 + MGP_CBAJ_P0042337 Zfp740 protein_coding protein_coding MGP_CBAJ_T0042338.1 MGP_CBAJ_G0022105.1 mouse_genomes_project 15 112036781 112037812 + Zfp740 protein_coding retained_intron MGP_CBAJ_T0042339.1 MGP_CBAJ_G0022105.1 mouse_genomes_project 15 112037425 112047108 + Zfp740 protein_coding retained_intron MGP_CBAJ_T0098930.1 MGP_CBAJ_G0037185.1 mouse_genomes_project 15 112343257 112343356 + Gm24128 snRNA snRNA MGP_CBAJ_T0040194.1 MGP_CBAJ_G0021428.1 mouse_genomes_project 15 7000949 7027540 - MGP_CBAJ_P0040194 Il7r protein_coding protein_coding MGP_CBAJ_T0098881.1 MGP_CBAJ_G0037136.1 mouse_genomes_project 15 10006430 10006539 - Gm25713 snRNA snRNA MGP_CBAJ_T0040639.1 MGP_CBAJ_G0021592.1 mouse_genomes_project 15 62920842 62937284 + Sqle protein_coding retained_intron MGP_CBAJ_T0040640.1 MGP_CBAJ_G0021592.1 mouse_genomes_project 15 62920846 62939517 + MGP_CBAJ_P0040640 Sqle protein_coding protein_coding MGP_CBAJ_T0040641.1 MGP_CBAJ_G0021592.1 mouse_genomes_project 15 62920872 62939517 + MGP_CBAJ_P0040641 Sqle protein_coding protein_coding MGP_CBAJ_T0040642.1 MGP_CBAJ_G0021592.1 mouse_genomes_project 15 62931308 62935525 + Sqle protein_coding retained_intron MGP_CBAJ_T0006662.1 MGP_CBAJ_G0005499.1 mouse_genomes_project 15 43290789 43334520 - Gm26854 lincRNA lincRNA MGP_CBAJ_T0009906.1 MGP_CBAJ_G0008044.1 mouse_genomes_project 15 10776588 10776728 + miRNA miRNA MGP_CBAJ_T0042221.1 MGP_CBAJ_G0022058.1 mouse_genomes_project 15 109934630 109950296 - MGP_CBAJ_P0042221 Csrnp2 protein_coding protein_coding MGP_CBAJ_T0040972.1 MGP_CBAJ_G0021687.1 mouse_genomes_project 15 81714677 81717140 + MGP_CBAJ_P0040972 Smpd5 protein_coding protein_coding MGP_CBAJ_T0040973.1 MGP_CBAJ_G0021687.1 mouse_genomes_project 15 81715211 81716496 + MGP_CBAJ_P0040973 Smpd5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040974.1 MGP_CBAJ_G0021687.1 mouse_genomes_project 15 81715494 81717137 + Smpd5 protein_coding retained_intron MGP_CBAJ_T0040975.1 MGP_CBAJ_G0021687.1 mouse_genomes_project 15 81715552 81716117 + Smpd5 protein_coding retained_intron MGP_CBAJ_T0042104.1 MGP_CBAJ_G0022020.1 mouse_genomes_project 15 108094976 108095291 + MGP_CBAJ_P0042104 Gm8973 protein_coding protein_coding MGP_CBAJ_T0009980.1 MGP_CBAJ_G0008118.1 mouse_genomes_project 15 112588214 112588289 - Mir688 miRNA miRNA MGP_CBAJ_T0041867.1 MGP_CBAJ_G0021943.1 mouse_genomes_project 15 97282624 97291982 - MGP_CBAJ_P0041867 Rabl2 protein_coding protein_coding MGP_CBAJ_T0041868.1 MGP_CBAJ_G0021943.1 mouse_genomes_project 15 97282628 97291924 - Rabl2 protein_coding retained_intron MGP_CBAJ_T0041869.1 MGP_CBAJ_G0021943.1 mouse_genomes_project 15 97282628 97291923 - MGP_CBAJ_P0041869 Rabl2 protein_coding protein_coding MGP_CBAJ_T0041870.1 MGP_CBAJ_G0021943.1 mouse_genomes_project 15 97283132 97290458 - MGP_CBAJ_P0041870 Rabl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041871.1 MGP_CBAJ_G0021943.1 mouse_genomes_project 15 97283404 97284634 - Rabl2 protein_coding retained_intron MGP_CBAJ_T0041872.1 MGP_CBAJ_G0021943.1 mouse_genomes_project 15 97283446 97291949 - MGP_CBAJ_P0041872 Rabl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041873.1 MGP_CBAJ_G0021943.1 mouse_genomes_project 15 97283474 97291898 - MGP_CBAJ_P0041873 Rabl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041874.1 MGP_CBAJ_G0021943.1 mouse_genomes_project 15 97283489 97284409 - MGP_CBAJ_P0041874 Rabl2 protein_coding protein_coding MGP_CBAJ_T0041875.1 MGP_CBAJ_G0021943.1 mouse_genomes_project 15 97283735 97291945 - MGP_CBAJ_P0041875 Rabl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041876.1 MGP_CBAJ_G0021943.1 mouse_genomes_project 15 97286307 97291964 - Rabl2 protein_coding retained_intron MGP_CBAJ_T0041877.1 MGP_CBAJ_G0021943.1 mouse_genomes_project 15 97287951 97291935 - Rabl2 protein_coding processed_transcript MGP_CBAJ_T0040556.1 MGP_CBAJ_G0021557.1 mouse_genomes_project 15 57532456 57594394 + MGP_CBAJ_P0040556 Colec10 protein_coding protein_coding MGP_CBAJ_T0042318.1 MGP_CBAJ_G0022097.1 mouse_genomes_project 15 111781838 111791892 - MGP_CBAJ_P0042318 Krt8 protein_coding protein_coding MGP_CBAJ_T0003555.1 MGP_CBAJ_G0003221.1 mouse_genomes_project 15 107549718 107551977 + 9330020H09Rik antisense antisense MGP_CBAJ_T0009984.1 MGP_CBAJ_G0008122.1 mouse_genomes_project 15 113363937 113364008 - Mir6963 miRNA miRNA MGP_CBAJ_T0098926.1 MGP_CBAJ_G0037181.1 mouse_genomes_project 15 108537635 108537742 - Gm22951 snRNA snRNA MGP_CBAJ_T0040428.1 MGP_CBAJ_G0021508.1 mouse_genomes_project 15 37697159 37724656 - MGP_CBAJ_P0040428 Ywhaz protein_coding protein_coding MGP_CBAJ_T0040429.1 MGP_CBAJ_G0021508.1 mouse_genomes_project 15 37697958 37724649 - MGP_CBAJ_P0040429 Ywhaz protein_coding protein_coding MGP_CBAJ_T0040430.1 MGP_CBAJ_G0021508.1 mouse_genomes_project 15 37699633 37724344 - MGP_CBAJ_P0040430 Ywhaz protein_coding unknown_likely_coding MGP_CBAJ_T0040431.1 MGP_CBAJ_G0021508.1 mouse_genomes_project 15 37701960 37723637 - Ywhaz protein_coding retained_intron MGP_CBAJ_T0040432.1 MGP_CBAJ_G0021508.1 mouse_genomes_project 15 37720829 37722532 - MGP_CBAJ_P0040432 Ywhaz protein_coding protein_coding MGP_CBAJ_T0040433.1 MGP_CBAJ_G0021508.1 mouse_genomes_project 15 37720961 37723328 - MGP_CBAJ_P0040433 Ywhaz protein_coding protein_coding MGP_CBAJ_T0040434.1 MGP_CBAJ_G0021508.1 mouse_genomes_project 15 37721016 37724665 - MGP_CBAJ_P0040434 Ywhaz protein_coding protein_coding MGP_CBAJ_T0100161.1 MGP_CBAJ_G0038416.1 mouse_genomes_project 15 36229416 36229553 + Gm24771 snoRNA snoRNA MGP_CBAJ_T0003566.1 MGP_CBAJ_G0003230.1 mouse_genomes_project 15 110052149 110058387 + antisense antisense MGP_CBAJ_T0006687.1 MGP_CBAJ_G0005512.1 mouse_genomes_project 15 85727670 85730903 - Gm26884 lincRNA lincRNA MGP_CBAJ_T0003554.1 MGP_CBAJ_G0003220.1 mouse_genomes_project 15 106930107 106932596 + Gm26513 antisense antisense MGP_CBAJ_T0012926.1 MGP_CBAJ_G0011038.1 mouse_genomes_project 15 82976004 82976568 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097965.1 MGP_CBAJ_G0036238.1 mouse_genomes_project 15 94563090 94563194 + n-R5s42 rRNA rRNA MGP_CBAJ_T0041324.1 MGP_CBAJ_G0021780.1 mouse_genomes_project 15 85534649 85555283 - MGP_CBAJ_P0041324 Ddx17 protein_coding protein_coding MGP_CBAJ_T0042194.1 MGP_CBAJ_G0022049.1 mouse_genomes_project 15 109575111 109613444 + MGP_CBAJ_P0042194 Atf1 protein_coding protein_coding MGP_CBAJ_T0042195.1 MGP_CBAJ_G0022049.1 mouse_genomes_project 15 109575127 109606854 + MGP_CBAJ_P0042195 Atf1 protein_coding protein_coding MGP_CBAJ_T0042196.1 MGP_CBAJ_G0022049.1 mouse_genomes_project 15 109575193 109613378 + MGP_CBAJ_P0042196 Atf1 protein_coding unknown_likely_coding MGP_CBAJ_T0042197.1 MGP_CBAJ_G0022049.1 mouse_genomes_project 15 109575400 109582482 + MGP_CBAJ_P0042197 Atf1 protein_coding protein_coding MGP_CBAJ_T0042198.1 MGP_CBAJ_G0022049.1 mouse_genomes_project 15 109581826 109604500 + MGP_CBAJ_P0042198 Atf1 protein_coding protein_coding MGP_CBAJ_T0042199.1 MGP_CBAJ_G0022049.1 mouse_genomes_project 15 109581838 109582681 + Atf1 protein_coding retained_intron MGP_CBAJ_T0042200.1 MGP_CBAJ_G0022049.1 mouse_genomes_project 15 109581865 109606790 + MGP_CBAJ_P0042200 Atf1 protein_coding protein_coding MGP_CBAJ_T0042201.1 MGP_CBAJ_G0022049.1 mouse_genomes_project 15 109582400 109612974 + MGP_CBAJ_P0042201 Atf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042202.1 MGP_CBAJ_G0022049.1 mouse_genomes_project 15 109582418 109613017 + Atf1 protein_coding processed_transcript MGP_CBAJ_T0042203.1 MGP_CBAJ_G0022049.1 mouse_genomes_project 15 109606620 109612806 + MGP_CBAJ_P0042203 Atf1 protein_coding protein_coding MGP_CBAJ_T0098885.1 MGP_CBAJ_G0037140.1 mouse_genomes_project 15 24529600 24529757 - Gm22810 snRNA snRNA MGP_CBAJ_T0006656.1 MGP_CBAJ_G0005493.1 mouse_genomes_project 15 38787383 38811230 + Gm15942 lincRNA lincRNA MGP_CBAJ_T0003545.1 MGP_CBAJ_G0003213.1 mouse_genomes_project 15 89511513 89519927 + Gm20324 antisense antisense MGP_CBAJ_T0100169.1 MGP_CBAJ_G0038424.1 mouse_genomes_project 15 55458385 55458509 + Gm23267 snoRNA snoRNA MGP_CBAJ_T0040246.1 MGP_CBAJ_G0021445.1 mouse_genomes_project 15 9806941 9821598 - MGP_CBAJ_P0040246 Sub1 protein_coding unknown_likely_coding MGP_CBAJ_T0040247.1 MGP_CBAJ_G0021445.1 mouse_genomes_project 15 9811748 9821627 - Sub1 protein_coding retained_intron MGP_CBAJ_T0040248.1 MGP_CBAJ_G0021445.1 mouse_genomes_project 15 9812068 9821365 - Sub1 protein_coding processed_transcript MGP_CBAJ_T0042395.1 MGP_CBAJ_G0022120.1 mouse_genomes_project 15 112415827 112424582 + MGP_CBAJ_P0042395 Tarbp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042396.1 MGP_CBAJ_G0022120.1 mouse_genomes_project 15 112415881 112418616 + Tarbp2 protein_coding retained_intron MGP_CBAJ_T0042397.1 MGP_CBAJ_G0022120.1 mouse_genomes_project 15 112415992 112424510 + MGP_CBAJ_P0042397 Tarbp2 protein_coding protein_coding MGP_CBAJ_T0042398.1 MGP_CBAJ_G0022120.1 mouse_genomes_project 15 112416062 112424584 + Tarbp2 protein_coding retained_intron MGP_CBAJ_T0042399.1 MGP_CBAJ_G0022120.1 mouse_genomes_project 15 112416090 112419385 + MGP_CBAJ_P0042399 Tarbp2 protein_coding protein_coding MGP_CBAJ_T0042400.1 MGP_CBAJ_G0022120.1 mouse_genomes_project 15 112416094 112424584 + MGP_CBAJ_P0042400 Tarbp2 protein_coding protein_coding MGP_CBAJ_T0042401.1 MGP_CBAJ_G0022120.1 mouse_genomes_project 15 112416133 112417356 + Tarbp2 protein_coding retained_intron MGP_CBAJ_T0042402.1 MGP_CBAJ_G0022120.1 mouse_genomes_project 15 112416182 112424512 + MGP_CBAJ_P0042402 Tarbp2 protein_coding protein_coding MGP_CBAJ_T0042403.1 MGP_CBAJ_G0022120.1 mouse_genomes_project 15 112416192 112421817 + Tarbp2 protein_coding processed_transcript MGP_CBAJ_T0042404.1 MGP_CBAJ_G0022120.1 mouse_genomes_project 15 112416203 112419975 + Tarbp2 protein_coding retained_intron MGP_CBAJ_T0042405.1 MGP_CBAJ_G0022120.1 mouse_genomes_project 15 112416361 112420187 + MGP_CBAJ_P0042405 Tarbp2 protein_coding protein_coding MGP_CBAJ_T0042406.1 MGP_CBAJ_G0022120.1 mouse_genomes_project 15 112416434 112419716 + MGP_CBAJ_P0042406 Tarbp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042407.1 MGP_CBAJ_G0022120.1 mouse_genomes_project 15 112416437 112421500 + MGP_CBAJ_P0042407 Tarbp2 protein_coding protein_coding MGP_CBAJ_T0042408.1 MGP_CBAJ_G0022120.1 mouse_genomes_project 15 112418675 112420076 + Tarbp2 protein_coding retained_intron MGP_CBAJ_T0041424.1 MGP_CBAJ_G0021809.1 mouse_genomes_project 15 87241087 87251004 + MGP_CBAJ_P0041424 Sgsm3 protein_coding protein_coding MGP_CBAJ_T0101666.1 MGP_CBAJ_G0039697.1 mouse_genomes_project 15 107415630 107422764 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0009932.1 MGP_CBAJ_G0008070.1 mouse_genomes_project 15 81664083 81664151 + Mir6953 miRNA miRNA MGP_CBAJ_T0012938.1 MGP_CBAJ_G0011050.1 mouse_genomes_project 15 99803145 99803682 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100144.1 MGP_CBAJ_G0038399.1 mouse_genomes_project 15 2145476 2145557 + Snord72 snoRNA snoRNA MGP_CBAJ_T0041729.1 MGP_CBAJ_G0021905.1 mouse_genomes_project 15 93458125 93749521 + MGP_CBAJ_P0041729 Tbc1d22a protein_coding protein_coding MGP_CBAJ_T0040263.1 MGP_CBAJ_G0021448.1 mouse_genomes_project 15 10187711 10188173 - MGP_CBAJ_P0040263 1810049J17Rik protein_coding protein_coding MGP_CBAJ_T0041719.1 MGP_CBAJ_G0021902.1 mouse_genomes_project 15 93073577 93236931 - MGP_CBAJ_P0041719 Celsr1 protein_coding protein_coding MGP_CBAJ_T0041720.1 MGP_CBAJ_G0021902.1 mouse_genomes_project 15 93075519 93236924 - MGP_CBAJ_P0041720 Celsr1 protein_coding unknown_likely_coding MGP_CBAJ_T0011261.1 MGP_CBAJ_G0009399.1 mouse_genomes_project 15 62089966 62090267 + Gm23789 misc_RNA misc_RNA MGP_CBAJ_T0040683.1 MGP_CBAJ_G0021605.1 mouse_genomes_project 15 70110410 70114729 + Efr3a protein_coding processed_transcript MGP_CBAJ_T0040684.1 MGP_CBAJ_G0021605.1 mouse_genomes_project 15 70110416 70194132 + MGP_CBAJ_P0040684 Efr3a protein_coding protein_coding MGP_CBAJ_T0040685.1 MGP_CBAJ_G0021605.1 mouse_genomes_project 15 70110417 70114212 + Efr3a protein_coding processed_transcript MGP_CBAJ_T0040686.1 MGP_CBAJ_G0021605.1 mouse_genomes_project 15 70110417 70189563 + MGP_CBAJ_P0040686 Efr3a protein_coding protein_coding MGP_CBAJ_T0040687.1 MGP_CBAJ_G0021605.1 mouse_genomes_project 15 70110418 70153749 + Efr3a protein_coding processed_transcript MGP_CBAJ_T0040688.1 MGP_CBAJ_G0021605.1 mouse_genomes_project 15 70110422 70149408 + MGP_CBAJ_P0040688 Efr3a protein_coding protein_coding MGP_CBAJ_T0040689.1 MGP_CBAJ_G0021605.1 mouse_genomes_project 15 70110424 70146481 + Efr3a protein_coding retained_intron MGP_CBAJ_T0040690.1 MGP_CBAJ_G0021605.1 mouse_genomes_project 15 70110424 70143804 + MGP_CBAJ_P0040690 Efr3a protein_coding protein_coding MGP_CBAJ_T0040691.1 MGP_CBAJ_G0021605.1 mouse_genomes_project 15 70111216 70114218 + Efr3a protein_coding processed_transcript MGP_CBAJ_T0040692.1 MGP_CBAJ_G0021605.1 mouse_genomes_project 15 70171509 70177164 + Efr3a protein_coding retained_intron MGP_CBAJ_T0040693.1 MGP_CBAJ_G0021605.1 mouse_genomes_project 15 70175833 70178068 + Efr3a protein_coding retained_intron MGP_CBAJ_T0040694.1 MGP_CBAJ_G0021605.1 mouse_genomes_project 15 70177839 70187598 + Efr3a protein_coding retained_intron MGP_CBAJ_T0042290.1 MGP_CBAJ_G0022075.1 mouse_genomes_project 15 110981428 111001953 - MGP_CBAJ_P0042290 Krt80 protein_coding protein_coding MGP_CBAJ_T0098901.1 MGP_CBAJ_G0037156.1 mouse_genomes_project 15 62355289 62355445 - Gm24041 snRNA snRNA MGP_CBAJ_T0042114.1 MGP_CBAJ_G0022028.1 mouse_genomes_project 15 108430763 108446838 - MGP_CBAJ_P0042114 Fam186b protein_coding protein_coding MGP_CBAJ_T0040910.1 MGP_CBAJ_G0021671.1 mouse_genomes_project 15 81317009 81322180 - MGP_CBAJ_P0040910 Pycrl protein_coding protein_coding MGP_CBAJ_T0100164.1 MGP_CBAJ_G0038419.1 mouse_genomes_project 15 43507275 43507377 + Gm24751 snoRNA snoRNA MGP_CBAJ_T0041679.1 MGP_CBAJ_G0021887.1 mouse_genomes_project 15 91910061 91958817 - MGP_CBAJ_P0041679 5031439G07Rik protein_coding protein_coding MGP_CBAJ_T0041680.1 MGP_CBAJ_G0021887.1 mouse_genomes_project 15 91914111 91927246 - 5031439G07Rik protein_coding retained_intron MGP_CBAJ_T0041681.1 MGP_CBAJ_G0021887.1 mouse_genomes_project 15 91921862 91959591 - 5031439G07Rik protein_coding processed_transcript MGP_CBAJ_T0012885.1 MGP_CBAJ_G0010997.1 mouse_genomes_project 15 691906 692890 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0042327.1 MGP_CBAJ_G0022102.1 mouse_genomes_project 15 111957470 111962360 + MGP_CBAJ_P0042327 Igfbp6 protein_coding protein_coding MGP_CBAJ_T0040813.1 MGP_CBAJ_G0021641.1 mouse_genomes_project 15 79880236 79885425 - MGP_CBAJ_P0040813 Lynx1 protein_coding protein_coding MGP_CBAJ_T0040814.1 MGP_CBAJ_G0021641.1 mouse_genomes_project 15 79883979 79885393 - MGP_CBAJ_P0040814 Lynx1 protein_coding protein_coding MGP_CBAJ_T0040815.1 MGP_CBAJ_G0021641.1 mouse_genomes_project 15 79884697 79885403 - Lynx1 protein_coding retained_intron MGP_CBAJ_T0042079.1 MGP_CBAJ_G0022009.1 mouse_genomes_project 15 107716514 107737645 + MGP_CBAJ_P0042079 Ccdc65 protein_coding protein_coding MGP_CBAJ_T0042410.1 MGP_CBAJ_G0022122.1 mouse_genomes_project 15 112424750 112538107 - MGP_CBAJ_P0042410 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040515.1 MGP_CBAJ_G0021542.1 mouse_genomes_project 15 46471955 46494345 + MGP_CBAJ_P0040515 Ebag9 protein_coding unknown_likely_coding MGP_CBAJ_T0042204.1 MGP_CBAJ_G0022050.1 mouse_genomes_project 15 109639594 109654517 + MGP_CBAJ_P0042204 Tmprss12 protein_coding protein_coding MGP_CBAJ_T0041535.1 MGP_CBAJ_G0021834.1 mouse_genomes_project 15 88451747 88459125 + MGP_CBAJ_P0041535 4930407I10Rik protein_coding protein_coding MGP_CBAJ_T0040610.1 MGP_CBAJ_G0021576.1 mouse_genomes_project 15 61477426 61526625 - MGP_CBAJ_P0040610 Gm29394 protein_coding protein_coding MGP_CBAJ_T0040613.1 MGP_CBAJ_G0021576.1 mouse_genomes_project 15 61480142 61526407 - MGP_CBAJ_P0040613 Gm29394 protein_coding protein_coding MGP_CBAJ_T0040617.1 MGP_CBAJ_G0021576.1 mouse_genomes_project 15 61499094 61526383 - MGP_CBAJ_P0040617 Gm29394 protein_coding protein_coding MGP_CBAJ_T0040618.1 MGP_CBAJ_G0021576.1 mouse_genomes_project 15 61499213 61526406 - MGP_CBAJ_P0040618 Gm29394 protein_coding protein_coding MGP_CBAJ_T0040775.1 MGP_CBAJ_G0021628.1 mouse_genomes_project 15 78733555 78747500 - MGP_CBAJ_P0040775 Gpr20 protein_coding protein_coding MGP_CBAJ_T0041239.1 MGP_CBAJ_G0021762.1 mouse_genomes_project 15 84849191 84877882 + Triobp protein_coding processed_transcript MGP_CBAJ_T0041240.1 MGP_CBAJ_G0021762.1 mouse_genomes_project 15 84849191 84914495 + MGP_CBAJ_P0041240 Triobp protein_coding protein_coding MGP_CBAJ_T0041241.1 MGP_CBAJ_G0021762.1 mouse_genomes_project 15 84849191 84914797 + MGP_CBAJ_P0041241 Triobp protein_coding protein_coding MGP_CBAJ_T0041242.1 MGP_CBAJ_G0021762.1 mouse_genomes_project 15 84849724 84854806 + Triobp protein_coding retained_intron MGP_CBAJ_T0041243.1 MGP_CBAJ_G0021762.1 mouse_genomes_project 15 84891982 84914794 + MGP_CBAJ_P0041243 Triobp protein_coding protein_coding MGP_CBAJ_T0041244.1 MGP_CBAJ_G0021762.1 mouse_genomes_project 15 84891997 84914792 + MGP_CBAJ_P0041244 Triobp protein_coding protein_coding MGP_CBAJ_T0041245.1 MGP_CBAJ_G0021762.1 mouse_genomes_project 15 84892019 84903796 + MGP_CBAJ_P0041245 Triobp protein_coding protein_coding MGP_CBAJ_T0041246.1 MGP_CBAJ_G0021762.1 mouse_genomes_project 15 84892647 84900377 + MGP_CBAJ_P0041246 Triobp protein_coding protein_coding MGP_CBAJ_T0041247.1 MGP_CBAJ_G0021762.1 mouse_genomes_project 15 84911116 84913632 + Triobp protein_coding processed_transcript MGP_CBAJ_T0009926.1 MGP_CBAJ_G0008064.1 mouse_genomes_project 15 72817165 72817261 - Mir30b miRNA miRNA MGP_CBAJ_T0012906.1 MGP_CBAJ_G0011018.1 mouse_genomes_project 15 42071238 42071733 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101272.1 MGP_CBAJ_G0039400.1 mouse_genomes_project 15 80713744 80717968 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101273.1 MGP_CBAJ_G0039400.1 mouse_genomes_project 15 80714104 80717575 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0041883.1 MGP_CBAJ_G0021947.1 mouse_genomes_project 15 98810999 98941107 - MGP_CBAJ_P0041883 Kif21a protein_coding protein_coding MGP_CBAJ_T0041884.1 MGP_CBAJ_G0021947.1 mouse_genomes_project 15 98810999 98941107 - MGP_CBAJ_P0041884 Kif21a protein_coding protein_coding MGP_CBAJ_T0041885.1 MGP_CBAJ_G0021947.1 mouse_genomes_project 15 98810999 98941107 - MGP_CBAJ_P0041885 Kif21a protein_coding protein_coding MGP_CBAJ_T0041886.1 MGP_CBAJ_G0021947.1 mouse_genomes_project 15 98810999 98941107 - MGP_CBAJ_P0041886 Kif21a protein_coding protein_coding MGP_CBAJ_T0041887.1 MGP_CBAJ_G0021947.1 mouse_genomes_project 15 98810999 98941107 - MGP_CBAJ_P0041887 Kif21a protein_coding protein_coding MGP_CBAJ_T0009904.1 MGP_CBAJ_G0008042.1 mouse_genomes_project 15 2958553 2958667 + Gm27760 miRNA miRNA MGP_CBAJ_T0040879.1 MGP_CBAJ_G0021662.1 mouse_genomes_project 15 81045341 81067099 - MGP_CBAJ_P0040879 Top1mt protein_coding protein_coding MGP_CBAJ_T0042148.1 MGP_CBAJ_G0022033.1 mouse_genomes_project 15 108657822 108662451 - MGP_CBAJ_P0042148 Bcdin3d protein_coding protein_coding MGP_CBAJ_T0041468.1 MGP_CBAJ_G0021818.1 mouse_genomes_project 15 87988727 88022573 + MGP_CBAJ_P0041468 L3mbtl2 protein_coding protein_coding MGP_CBAJ_T0041469.1 MGP_CBAJ_G0021818.1 mouse_genomes_project 15 87988772 88022563 + MGP_CBAJ_P0041469 L3mbtl2 protein_coding protein_coding MGP_CBAJ_T0041470.1 MGP_CBAJ_G0021818.1 mouse_genomes_project 15 87988792 88022563 + L3mbtl2 protein_coding retained_intron MGP_CBAJ_T0041471.1 MGP_CBAJ_G0021818.1 mouse_genomes_project 15 87988794 88022557 + L3mbtl2 protein_coding processed_transcript MGP_CBAJ_T0041472.1 MGP_CBAJ_G0021818.1 mouse_genomes_project 15 87988794 88022573 + MGP_CBAJ_P0041472 L3mbtl2 protein_coding protein_coding MGP_CBAJ_T0041473.1 MGP_CBAJ_G0021818.1 mouse_genomes_project 15 87988839 88016323 + L3mbtl2 protein_coding processed_transcript MGP_CBAJ_T0041474.1 MGP_CBAJ_G0021818.1 mouse_genomes_project 15 87994987 87996678 + L3mbtl2 protein_coding retained_intron MGP_CBAJ_T0041475.1 MGP_CBAJ_G0021818.1 mouse_genomes_project 15 87995056 88006349 + L3mbtl2 protein_coding processed_transcript MGP_CBAJ_T0041476.1 MGP_CBAJ_G0021818.1 mouse_genomes_project 15 88006237 88008010 + MGP_CBAJ_P0041476 L3mbtl2 protein_coding protein_coding MGP_CBAJ_T0041478.1 MGP_CBAJ_G0021818.1 mouse_genomes_project 15 88016266 88018108 + L3mbtl2 protein_coding retained_intron MGP_CBAJ_T0041479.1 MGP_CBAJ_G0021818.1 mouse_genomes_project 15 88020279 88021445 + L3mbtl2 protein_coding retained_intron MGP_CBAJ_T0042342.1 MGP_CBAJ_G0022107.1 mouse_genomes_project 15 112066440 112096014 - MGP_CBAJ_P0042342 Rarg protein_coding protein_coding MGP_CBAJ_T0042343.1 MGP_CBAJ_G0022107.1 mouse_genomes_project 15 112066442 112081498 - MGP_CBAJ_P0042343 Rarg protein_coding protein_coding MGP_CBAJ_T0042344.1 MGP_CBAJ_G0022107.1 mouse_genomes_project 15 112071492 112095845 - MGP_CBAJ_P0042344 Rarg protein_coding protein_coding MGP_CBAJ_T0042345.1 MGP_CBAJ_G0022107.1 mouse_genomes_project 15 112076964 112078615 - Rarg protein_coding processed_transcript MGP_CBAJ_T0042346.1 MGP_CBAJ_G0022107.1 mouse_genomes_project 15 112076968 112080230 - Rarg protein_coding processed_transcript MGP_CBAJ_T0042347.1 MGP_CBAJ_G0022107.1 mouse_genomes_project 15 112076968 112085313 - Rarg protein_coding processed_transcript MGP_CBAJ_T0003525.1 MGP_CBAJ_G0003198.1 mouse_genomes_project 15 58618966 58621872 - 1700040F17Rik antisense antisense MGP_CBAJ_T0040486.1 MGP_CBAJ_G0021526.1 mouse_genomes_project 15 41062124 41086547 + MGP_CBAJ_P0040486 Dcstamp protein_coding protein_coding MGP_CBAJ_T0040238.1 MGP_CBAJ_G0021438.1 mouse_genomes_project 15 8620130 8653224 + MGP_CBAJ_P0040238 C1qtnf3 protein_coding protein_coding MGP_CBAJ_T0040239.1 MGP_CBAJ_G0021438.1 mouse_genomes_project 15 8620155 8652780 + MGP_CBAJ_P0040239 C1qtnf3 protein_coding protein_coding MGP_CBAJ_T0042311.1 MGP_CBAJ_G0022090.1 mouse_genomes_project 15 111562742 111570040 - MGP_CBAJ_P0042311 Krt2 protein_coding protein_coding MGP_CBAJ_T0011272.1 MGP_CBAJ_G0009410.1 mouse_genomes_project 15 108305715 108305803 - Gm25057 misc_RNA misc_RNA MGP_CBAJ_T0040940.1 MGP_CBAJ_G0021682.1 mouse_genomes_project 15 81526908 81533988 - MGP_CBAJ_P0040940 BC024139 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040941.1 MGP_CBAJ_G0021682.1 mouse_genomes_project 15 81526911 81533934 - MGP_CBAJ_P0040941 BC024139 protein_coding protein_coding MGP_CBAJ_T0040942.1 MGP_CBAJ_G0021682.1 mouse_genomes_project 15 81526912 81533948 - MGP_CBAJ_P0040942 BC024139 protein_coding protein_coding MGP_CBAJ_T0040943.1 MGP_CBAJ_G0021682.1 mouse_genomes_project 15 81530200 81533463 - BC024139 protein_coding processed_transcript MGP_CBAJ_T0012924.1 MGP_CBAJ_G0011036.1 mouse_genomes_project 15 81367206 81368482 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0040503.1 MGP_CBAJ_G0021533.1 mouse_genomes_project 15 44051563 44337032 - MGP_CBAJ_P0040503 Angpt1 protein_coding protein_coding MGP_CBAJ_T0040143.1 MGP_CBAJ_G0021414.1 mouse_genomes_project 15 4458752 4668510 - MGP_CBAJ_P0040143 Egflam protein_coding protein_coding MGP_CBAJ_T0040144.1 MGP_CBAJ_G0021414.1 mouse_genomes_project 15 4459210 4668557 - MGP_CBAJ_P0040144 Egflam protein_coding protein_coding MGP_CBAJ_T0040145.1 MGP_CBAJ_G0021414.1 mouse_genomes_project 15 4459215 4668601 - MGP_CBAJ_P0040145 Egflam protein_coding nonsense_mediated_decay MGP_CBAJ_T0040146.1 MGP_CBAJ_G0021414.1 mouse_genomes_project 15 4467558 4480318 - Egflam protein_coding retained_intron MGP_CBAJ_T0040147.1 MGP_CBAJ_G0021414.1 mouse_genomes_project 15 4490314 4668475 - Egflam protein_coding retained_intron MGP_CBAJ_T0040148.1 MGP_CBAJ_G0021414.1 mouse_genomes_project 15 4515001 4516259 - Egflam protein_coding processed_transcript MGP_CBAJ_T0040149.1 MGP_CBAJ_G0021414.1 mouse_genomes_project 15 4567394 4668467 - Egflam protein_coding retained_intron MGP_CBAJ_T0003565.1 MGP_CBAJ_G0003229.1 mouse_genomes_project 15 110042798 110048764 + Gm20680 antisense antisense MGP_CBAJ_T0042236.1 MGP_CBAJ_G0022063.1 mouse_genomes_project 15 110120856 110151010 - MGP_CBAJ_P0042236 Bin2 protein_coding protein_coding MGP_CBAJ_T0042237.1 MGP_CBAJ_G0022063.1 mouse_genomes_project 15 110120862 110150962 - MGP_CBAJ_P0042237 Bin2 protein_coding protein_coding MGP_CBAJ_T0042238.1 MGP_CBAJ_G0022063.1 mouse_genomes_project 15 110120862 110150984 - MGP_CBAJ_P0042238 Bin2 protein_coding protein_coding MGP_CBAJ_T0042239.1 MGP_CBAJ_G0022063.1 mouse_genomes_project 15 110128691 110150962 - MGP_CBAJ_P0042239 Bin2 protein_coding protein_coding MGP_CBAJ_T0042240.1 MGP_CBAJ_G0022063.1 mouse_genomes_project 15 110128787 110150982 - MGP_CBAJ_P0042240 Bin2 protein_coding protein_coding MGP_CBAJ_T0042241.1 MGP_CBAJ_G0022063.1 mouse_genomes_project 15 110128829 110133552 - Bin2 protein_coding processed_transcript MGP_CBAJ_T0042242.1 MGP_CBAJ_G0022063.1 mouse_genomes_project 15 110131025 110132612 - Bin2 protein_coding retained_intron MGP_CBAJ_T0042031.1 MGP_CBAJ_G0021989.1 mouse_genomes_project 15 107020909 107079667 - protein_coding processed_transcript MGP_CBAJ_T0042033.1 MGP_CBAJ_G0021989.1 mouse_genomes_project 15 107040517 107049288 - MGP_CBAJ_P0042033 protein_coding protein_coding MGP_CBAJ_T0017212.1 MGP_CBAJ_G0015043.1 mouse_genomes_project 15 82978706 82979382 - Gm20688 processed_transcript processed_transcript MGP_CBAJ_T0041260.1 MGP_CBAJ_G0021767.1 mouse_genomes_project 15 85037191 85065111 + MGP_CBAJ_P0041260 Micall1 protein_coding protein_coding MGP_CBAJ_T0009964.1 MGP_CBAJ_G0008102.1 mouse_genomes_project 15 96809174 96809247 - Mir6958 miRNA miRNA MGP_CBAJ_T0041394.1 MGP_CBAJ_G0021801.1 mouse_genomes_project 15 86410301 86413974 - MGP_CBAJ_P0041394 Rps19bp1 protein_coding protein_coding MGP_CBAJ_T0040348.1 MGP_CBAJ_G0021479.1 mouse_genomes_project 15 31919738 31930786 - MGP_CBAJ_P0040348 Cct5 protein_coding protein_coding MGP_CBAJ_T0040349.1 MGP_CBAJ_G0021479.1 mouse_genomes_project 15 31920920 31922000 - Cct5 protein_coding retained_intron MGP_CBAJ_T0040350.1 MGP_CBAJ_G0021479.1 mouse_genomes_project 15 31922383 31923467 - Cct5 protein_coding retained_intron MGP_CBAJ_T0040351.1 MGP_CBAJ_G0021479.1 mouse_genomes_project 15 31923283 31930478 - MGP_CBAJ_P0040351 Cct5 protein_coding protein_coding MGP_CBAJ_T0040352.1 MGP_CBAJ_G0021479.1 mouse_genomes_project 15 31924379 31930679 - Cct5 protein_coding retained_intron MGP_CBAJ_T0041962.1 MGP_CBAJ_G0021972.1 mouse_genomes_project 15 105183404 105264529 - MGP_CBAJ_P0041962 Slc38a1 protein_coding protein_coding MGP_CBAJ_T0041963.1 MGP_CBAJ_G0021972.1 mouse_genomes_project 15 105183404 105264148 - MGP_CBAJ_P0041963 Slc38a1 protein_coding protein_coding MGP_CBAJ_T0041964.1 MGP_CBAJ_G0021972.1 mouse_genomes_project 15 105183404 105265063 - MGP_CBAJ_P0041964 Slc38a1 protein_coding protein_coding MGP_CBAJ_T0017190.1 MGP_CBAJ_G0015034.1 mouse_genomes_project 15 38460732 38478241 - Gm15941 processed_transcript processed_transcript MGP_CBAJ_T0017191.1 MGP_CBAJ_G0015034.1 mouse_genomes_project 15 38461710 38474446 - Gm15941 processed_transcript processed_transcript MGP_CBAJ_T0017192.1 MGP_CBAJ_G0015034.1 mouse_genomes_project 15 38461901 38477725 - Gm15941 processed_transcript processed_transcript MGP_CBAJ_T0017193.1 MGP_CBAJ_G0015034.1 mouse_genomes_project 15 38462017 38478239 - Gm15941 processed_transcript processed_transcript MGP_CBAJ_T0017194.1 MGP_CBAJ_G0015034.1 mouse_genomes_project 15 38462170 38478230 - Gm15941 processed_transcript processed_transcript MGP_CBAJ_T0017195.1 MGP_CBAJ_G0015034.1 mouse_genomes_project 15 38472973 38478991 - Gm15941 processed_transcript processed_transcript MGP_CBAJ_T0042478.1 MGP_CBAJ_G0022145.1 mouse_genomes_project 15 113470438 113517539 + MGP_CBAJ_P0042478 Nckap1l protein_coding protein_coding MGP_CBAJ_T0098880.1 MGP_CBAJ_G0037135.1 mouse_genomes_project 15 5594470 5594581 + Gm24144 snRNA snRNA MGP_CBAJ_T0041220.1 MGP_CBAJ_G0021755.1 mouse_genomes_project 15 84633101 84662184 - MGP_CBAJ_P0041220 Card10 protein_coding protein_coding MGP_CBAJ_T0041221.1 MGP_CBAJ_G0021755.1 mouse_genomes_project 15 84633950 84661811 - MGP_CBAJ_P0041221 Card10 protein_coding protein_coding MGP_CBAJ_T0041222.1 MGP_CBAJ_G0021755.1 mouse_genomes_project 15 84646649 84649703 - Card10 protein_coding processed_transcript MGP_CBAJ_T0098488.1 MGP_CBAJ_G0036747.1 mouse_genomes_project 15 96491997 96493727 - Gm20621 sense_overlapping sense_overlapping MGP_CBAJ_T0098489.1 MGP_CBAJ_G0036747.1 mouse_genomes_project 15 96492718 96493736 - Gm20621 sense_overlapping sense_overlapping MGP_CBAJ_T0098490.1 MGP_CBAJ_G0036747.1 mouse_genomes_project 15 96492723 96493694 - Gm20621 sense_overlapping sense_overlapping MGP_CBAJ_T0041948.1 MGP_CBAJ_G0021964.1 mouse_genomes_project 15 102971653 103500758 + MGP_CBAJ_P0041948 Tmem117 protein_coding protein_coding MGP_CBAJ_T0006666.1 MGP_CBAJ_G0005503.1 mouse_genomes_project 15 48346313 48402064 + 1700022A22Rik lincRNA lincRNA MGP_CBAJ_T0006667.1 MGP_CBAJ_G0005503.1 mouse_genomes_project 15 48346325 48383773 + 1700022A22Rik lincRNA lincRNA MGP_CBAJ_T0006668.1 MGP_CBAJ_G0005503.1 mouse_genomes_project 15 48346339 48402113 + 1700022A22Rik lincRNA lincRNA MGP_CBAJ_T0040105.1 MGP_CBAJ_G0021407.1 mouse_genomes_project 15 2254401 2301706 - Ptger4 protein_coding processed_transcript MGP_CBAJ_T0040106.1 MGP_CBAJ_G0021407.1 mouse_genomes_project 15 2292394 2303168 - MGP_CBAJ_P0040106 Ptger4 protein_coding protein_coding MGP_CBAJ_T0040107.1 MGP_CBAJ_G0021407.1 mouse_genomes_project 15 2292394 2303183 - MGP_CBAJ_P0040107 Ptger4 protein_coding protein_coding MGP_CBAJ_T0040502.1 MGP_CBAJ_G0021532.1 mouse_genomes_project 15 43420759 43425172 - MGP_CBAJ_P0040502 Abra protein_coding protein_coding MGP_CBAJ_T0042464.1 MGP_CBAJ_G0022139.1 mouse_genomes_project 15 113268788 113299064 + MGP_CBAJ_P0042464 Copz1 protein_coding protein_coding MGP_CBAJ_T0041054.1 MGP_CBAJ_G0021702.1 mouse_genomes_project 15 81968750 81974734 - MGP_CBAJ_P0041054 Scrt1 protein_coding protein_coding MGP_CBAJ_T0041055.1 MGP_CBAJ_G0021702.1 mouse_genomes_project 15 81968760 81974507 - MGP_CBAJ_P0041055 Scrt1 protein_coding protein_coding MGP_CBAJ_T0006683.1 MGP_CBAJ_G0005508.1 mouse_genomes_project 15 80289215 80292091 - Gm28502 lincRNA lincRNA MGP_CBAJ_T0006682.1 MGP_CBAJ_G0005507.1 mouse_genomes_project 15 71624148 71776853 + lincRNA lincRNA MGP_CBAJ_T0040465.1 MGP_CBAJ_G0021517.1 mouse_genomes_project 15 39457102 39466609 - MGP_CBAJ_P0040465 Klf10 protein_coding protein_coding MGP_CBAJ_T0040812.1 MGP_CBAJ_G0021640.1 mouse_genomes_project 15 79875148 79879078 - MGP_CBAJ_P0040812 Slurp2 protein_coding protein_coding MGP_CBAJ_T0042477.1 MGP_CBAJ_G0022144.1 mouse_genomes_project 15 113452221 113465089 - MGP_CBAJ_P0042477 BC048502 protein_coding protein_coding MGP_CBAJ_T0000910.1 MGP_CBAJ_G0000845.1 mouse_genomes_project 15 100597846 100600736 + TEC TEC MGP_CBAJ_T0011262.1 MGP_CBAJ_G0009400.1 mouse_genomes_project 15 65958238 65958411 + Gm27913 misc_RNA misc_RNA MGP_CBAJ_T0041190.1 MGP_CBAJ_G0021743.1 mouse_genomes_project 15 84193647 84206191 - MGP_CBAJ_P0041190 Tex33 protein_coding protein_coding MGP_CBAJ_T0041191.1 MGP_CBAJ_G0021743.1 mouse_genomes_project 15 84193647 84213312 - MGP_CBAJ_P0041191 Tex33 protein_coding protein_coding MGP_CBAJ_T0041192.1 MGP_CBAJ_G0021743.1 mouse_genomes_project 15 84193647 84213312 - MGP_CBAJ_P0041192 Tex33 protein_coding protein_coding MGP_CBAJ_T0041534.1 MGP_CBAJ_G0021833.1 mouse_genomes_project 15 88433840 88438361 - MGP_CBAJ_P0041534 protein_coding protein_coding MGP_CBAJ_T0041224.1 MGP_CBAJ_G0021757.1 mouse_genomes_project 15 84726307 84734350 - MGP_CBAJ_P0041224 Lgals2 protein_coding protein_coding MGP_CBAJ_T0000899.1 MGP_CBAJ_G0000834.1 mouse_genomes_project 15 6064197 6067165 - TEC TEC MGP_CBAJ_T0012931.1 MGP_CBAJ_G0011043.1 mouse_genomes_project 15 90838255 90838592 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098924.1 MGP_CBAJ_G0037179.1 mouse_genomes_project 15 104078108 104078212 - Gm24668 snRNA snRNA MGP_CBAJ_T0040481.1 MGP_CBAJ_G0021525.1 mouse_genomes_project 15 40433346 41015161 + MGP_CBAJ_P0040481 Rims2 protein_coding protein_coding MGP_CBAJ_T0040482.1 MGP_CBAJ_G0021525.1 mouse_genomes_project 15 40433377 41014985 + MGP_CBAJ_P0040482 Rims2 protein_coding protein_coding MGP_CBAJ_T0040483.1 MGP_CBAJ_G0021525.1 mouse_genomes_project 15 40529080 40620787 + MGP_CBAJ_P0040483 Rims2 protein_coding unknown_likely_coding MGP_CBAJ_T0040484.1 MGP_CBAJ_G0021525.1 mouse_genomes_project 15 40674496 40947949 + MGP_CBAJ_P0040484 Rims2 protein_coding unknown_likely_coding MGP_CBAJ_T0040485.1 MGP_CBAJ_G0021525.1 mouse_genomes_project 15 40993051 41019332 + MGP_CBAJ_P0040485 Rims2 protein_coding unknown_likely_coding MGP_CBAJ_T0100146.1 MGP_CBAJ_G0038401.1 mouse_genomes_project 15 9089537 9089664 - Gm24844 snoRNA snoRNA MGP_CBAJ_T0041914.1 MGP_CBAJ_G0021955.1 mouse_genomes_project 15 101423592 101463963 - MGP_CBAJ_P0041914 Gxylt1 protein_coding protein_coding MGP_CBAJ_T0041915.1 MGP_CBAJ_G0021955.1 mouse_genomes_project 15 101428302 101463953 - MGP_CBAJ_P0041915 Gxylt1 protein_coding protein_coding MGP_CBAJ_T0042378.1 MGP_CBAJ_G0022116.1 mouse_genomes_project 15 112348524 112350086 + MGP_CBAJ_P0042378 Prr13 protein_coding protein_coding MGP_CBAJ_T0042379.1 MGP_CBAJ_G0022116.1 mouse_genomes_project 15 112348671 112352301 + MGP_CBAJ_P0042379 Prr13 protein_coding protein_coding MGP_CBAJ_T0042380.1 MGP_CBAJ_G0022116.1 mouse_genomes_project 15 112348698 112352277 + MGP_CBAJ_P0042380 Prr13 protein_coding protein_coding MGP_CBAJ_T0042381.1 MGP_CBAJ_G0022116.1 mouse_genomes_project 15 112348728 112352279 + MGP_CBAJ_P0042381 Prr13 protein_coding protein_coding MGP_CBAJ_T0042382.1 MGP_CBAJ_G0022116.1 mouse_genomes_project 15 112349580 112352271 + MGP_CBAJ_P0042382 Prr13 protein_coding protein_coding MGP_CBAJ_T0009953.1 MGP_CBAJ_G0008091.1 mouse_genomes_project 15 89223237 89223294 - Gm27463 miRNA miRNA MGP_CBAJ_T0041789.1 MGP_CBAJ_G0021923.1 mouse_genomes_project 15 96776545 96804395 - MGP_CBAJ_P0041789 Plxnb2 protein_coding unknown_likely_coding MGP_CBAJ_T0041790.1 MGP_CBAJ_G0021923.1 mouse_genomes_project 15 96776549 96777580 - Plxnb2 protein_coding processed_transcript MGP_CBAJ_T0041791.1 MGP_CBAJ_G0021923.1 mouse_genomes_project 15 96776981 96778245 - Plxnb2 protein_coding processed_transcript MGP_CBAJ_T0041792.1 MGP_CBAJ_G0021923.1 mouse_genomes_project 15 96784688 96785225 - Plxnb2 protein_coding processed_transcript MGP_CBAJ_T0041793.1 MGP_CBAJ_G0021923.1 mouse_genomes_project 15 96788568 96789475 - Plxnb2 protein_coding processed_transcript MGP_CBAJ_T0041730.1 MGP_CBAJ_G0021906.1 mouse_genomes_project 15 95062901 95205095 + MGP_CBAJ_P0041730 Fam19a5 protein_coding protein_coding MGP_CBAJ_T0042301.1 MGP_CBAJ_G0022081.1 mouse_genomes_project 15 111219504 111227291 - MGP_CBAJ_P0042301 Krt84 protein_coding protein_coding MGP_CBAJ_T0040806.1 MGP_CBAJ_G0021636.1 mouse_genomes_project 15 79847066 79849297 + MGP_CBAJ_P0040806 Psca protein_coding protein_coding MGP_CBAJ_T0040810.1 MGP_CBAJ_G0021639.1 mouse_genomes_project 15 79864571 79866654 - MGP_CBAJ_P0040810 Lypd2 protein_coding protein_coding MGP_CBAJ_T0040811.1 MGP_CBAJ_G0021639.1 mouse_genomes_project 15 79865125 79866642 - Lypd2 protein_coding retained_intron MGP_CBAJ_T0098906.1 MGP_CBAJ_G0037161.1 mouse_genomes_project 15 73188048 73188155 + Gm25987 snRNA snRNA MGP_CBAJ_T0098919.1 MGP_CBAJ_G0037174.1 mouse_genomes_project 15 93456429 93456533 - Gm22818 snRNA snRNA MGP_CBAJ_T0040880.1 MGP_CBAJ_G0021663.1 mouse_genomes_project 15 81092542 81102671 + MGP_CBAJ_P0040880 Rhpn1 protein_coding protein_coding MGP_CBAJ_T0040881.1 MGP_CBAJ_G0021663.1 mouse_genomes_project 15 81092570 81102673 + Rhpn1 protein_coding retained_intron MGP_CBAJ_T0040882.1 MGP_CBAJ_G0021663.1 mouse_genomes_project 15 81092580 81102668 + Rhpn1 protein_coding retained_intron MGP_CBAJ_T0040883.1 MGP_CBAJ_G0021663.1 mouse_genomes_project 15 81092591 81102671 + MGP_CBAJ_P0040883 Rhpn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040884.1 MGP_CBAJ_G0021663.1 mouse_genomes_project 15 81092656 81102488 + MGP_CBAJ_P0040884 Rhpn1 protein_coding protein_coding MGP_CBAJ_T0040909.1 MGP_CBAJ_G0021670.1 mouse_genomes_project 15 81310305 81315078 + MGP_CBAJ_P0040909 Tigd5 protein_coding protein_coding MGP_CBAJ_T0098916.1 MGP_CBAJ_G0037171.1 mouse_genomes_project 15 87908217 87908324 + Gm22067 snRNA snRNA MGP_CBAJ_T0041058.1 MGP_CBAJ_G0021705.1 mouse_genomes_project 15 82035501 82060592 + MGP_CBAJ_P0041058 Adck5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041059.1 MGP_CBAJ_G0021705.1 mouse_genomes_project 15 82035521 82060600 + Adck5 protein_coding retained_intron MGP_CBAJ_T0041060.1 MGP_CBAJ_G0021705.1 mouse_genomes_project 15 82035547 82056607 + Adck5 protein_coding processed_transcript MGP_CBAJ_T0041061.1 MGP_CBAJ_G0021705.1 mouse_genomes_project 15 82035554 82060593 + Adck5 protein_coding retained_intron MGP_CBAJ_T0041062.1 MGP_CBAJ_G0021705.1 mouse_genomes_project 15 82035555 82054509 + Adck5 protein_coding processed_transcript MGP_CBAJ_T0041063.1 MGP_CBAJ_G0021705.1 mouse_genomes_project 15 82035616 82060434 + MGP_CBAJ_P0041063 Adck5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041064.1 MGP_CBAJ_G0021705.1 mouse_genomes_project 15 82035625 82060579 + MGP_CBAJ_P0041064 Adck5 protein_coding protein_coding MGP_CBAJ_T0041065.1 MGP_CBAJ_G0021705.1 mouse_genomes_project 15 82058221 82058954 + Adck5 protein_coding retained_intron MGP_CBAJ_T0041066.1 MGP_CBAJ_G0021705.1 mouse_genomes_project 15 82058684 82059940 + Adck5 protein_coding retained_intron MGP_CBAJ_T0041067.1 MGP_CBAJ_G0021705.1 mouse_genomes_project 15 82058951 82059972 + Adck5 protein_coding retained_intron MGP_CBAJ_T0041068.1 MGP_CBAJ_G0021705.1 mouse_genomes_project 15 82059076 82060600 + Adck5 protein_coding retained_intron MGP_CBAJ_T0041069.1 MGP_CBAJ_G0021705.1 mouse_genomes_project 15 82059605 82059947 + Adck5 protein_coding retained_intron MGP_CBAJ_T0041070.1 MGP_CBAJ_G0021705.1 mouse_genomes_project 15 82059747 82060500 + Adck5 protein_coding retained_intron MGP_CBAJ_T0006692.1 MGP_CBAJ_G0005516.1 mouse_genomes_project 15 89611889 89618085 + AW121686 lincRNA lincRNA MGP_CBAJ_T0012912.1 MGP_CBAJ_G0011024.1 mouse_genomes_project 15 57425719 57426124 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0041332.1 MGP_CBAJ_G0021784.1 mouse_genomes_project 15 85697959 85703665 + MGP_CBAJ_P0041332 Tomm22 protein_coding protein_coding MGP_CBAJ_T0041333.1 MGP_CBAJ_G0021784.1 mouse_genomes_project 15 85698189 85703472 + Tomm22 protein_coding processed_transcript MGP_CBAJ_T0042150.1 MGP_CBAJ_G0022035.1 mouse_genomes_project 15 108782804 108791410 + MGP_CBAJ_P0042150 Aqp2 protein_coding protein_coding MGP_CBAJ_T0040487.1 MGP_CBAJ_G0021527.1 mouse_genomes_project 15 41094097 41197899 - MGP_CBAJ_P0040487 Dpys protein_coding protein_coding MGP_CBAJ_T0040488.1 MGP_CBAJ_G0021527.1 mouse_genomes_project 15 41112914 41197902 - MGP_CBAJ_P0040488 Dpys protein_coding protein_coding MGP_CBAJ_T0040489.1 MGP_CBAJ_G0021527.1 mouse_genomes_project 15 41112921 41123354 - MGP_CBAJ_P0040489 Dpys protein_coding protein_coding MGP_CBAJ_T0040490.1 MGP_CBAJ_G0021527.1 mouse_genomes_project 15 41197013 41197902 - Dpys protein_coding processed_transcript MGP_CBAJ_T0003535.1 MGP_CBAJ_G0003207.1 mouse_genomes_project 15 79919585 79939744 + Gm17189 antisense antisense MGP_CBAJ_T0040845.1 MGP_CBAJ_G0021651.1 mouse_genomes_project 15 80195642 80198427 - MGP_CBAJ_P0040845 Ly6a protein_coding protein_coding MGP_CBAJ_T0040913.1 MGP_CBAJ_G0021674.1 mouse_genomes_project 15 81369076 81377386 + Zfp707 protein_coding retained_intron MGP_CBAJ_T0040914.1 MGP_CBAJ_G0021674.1 mouse_genomes_project 15 81369215 81376793 + MGP_CBAJ_P0040914 Zfp707 protein_coding protein_coding MGP_CBAJ_T0040915.1 MGP_CBAJ_G0021674.1 mouse_genomes_project 15 81369225 81377262 + MGP_CBAJ_P0040915 Zfp707 protein_coding protein_coding MGP_CBAJ_T0040916.1 MGP_CBAJ_G0021674.1 mouse_genomes_project 15 81369594 81376283 + MGP_CBAJ_P0040916 Zfp707 protein_coding protein_coding MGP_CBAJ_T0040917.1 MGP_CBAJ_G0021674.1 mouse_genomes_project 15 81374300 81375468 + Zfp707 protein_coding retained_intron MGP_CBAJ_T0006645.1 MGP_CBAJ_G0005486.1 mouse_genomes_project 15 8357969 8370267 + lincRNA lincRNA MGP_CBAJ_T0040473.1 MGP_CBAJ_G0021520.1 mouse_genomes_project 15 40116057 40138691 + MGP_CBAJ_P0040473 Baalc protein_coding protein_coding MGP_CBAJ_T0040285.1 MGP_CBAJ_G0021453.1 mouse_genomes_project 15 10981181 11137073 - MGP_CBAJ_P0040285 Cdh6 protein_coding protein_coding MGP_CBAJ_T0012928.1 MGP_CBAJ_G0011040.1 mouse_genomes_project 15 85710571 85725449 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100159.1 MGP_CBAJ_G0038414.1 mouse_genomes_project 15 34875088 34875140 - Gm25809 snoRNA snoRNA MGP_CBAJ_T0040558.1 MGP_CBAJ_G0021559.1 mouse_genomes_project 15 57904484 57912712 + MGP_CBAJ_P0040558 Nov protein_coding protein_coding MGP_CBAJ_T0041022.1 MGP_CBAJ_G0021694.1 mouse_genomes_project 15 81788790 81796368 + MGP_CBAJ_P0041022 unknown_likely_coding unknown_likely_coding MGP_CBAJ_T0041136.1 MGP_CBAJ_G0021726.1 mouse_genomes_project 15 82589042 82601397 + MGP_CBAJ_P0041136 Apol6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041137.1 MGP_CBAJ_G0021726.1 mouse_genomes_project 15 82589388 82597444 + MGP_CBAJ_P0041137 Apol6 protein_coding protein_coding MGP_CBAJ_T0041138.1 MGP_CBAJ_G0021726.1 mouse_genomes_project 15 82589519 82595611 + MGP_CBAJ_P0041138 Apol6 protein_coding protein_coding MGP_CBAJ_T0041139.1 MGP_CBAJ_G0021726.1 mouse_genomes_project 15 82589589 82602206 + MGP_CBAJ_P0041139 Apol6 protein_coding protein_coding MGP_CBAJ_T0041140.1 MGP_CBAJ_G0021726.1 mouse_genomes_project 15 82589591 82596232 + MGP_CBAJ_P0041140 Apol6 protein_coding protein_coding MGP_CBAJ_T0041141.1 MGP_CBAJ_G0021726.1 mouse_genomes_project 15 82589800 82590552 + Apol6 protein_coding processed_transcript MGP_CBAJ_T0041142.1 MGP_CBAJ_G0021726.1 mouse_genomes_project 15 82597846 82601143 + Apol6 protein_coding processed_transcript MGP_CBAJ_T0003552.1 MGP_CBAJ_G0003218.1 mouse_genomes_project 15 106564830 106572781 + Rapgef3os1 antisense antisense MGP_CBAJ_T0040082.1 MGP_CBAJ_G0021397.1 mouse_genomes_project 15 961770 1118401 + MGP_CBAJ_P0040082 Oxct1 protein_coding protein_coding MGP_CBAJ_T0040083.1 MGP_CBAJ_G0021397.1 mouse_genomes_project 15 962071 1117020 + MGP_CBAJ_P0040083 Oxct1 protein_coding protein_coding MGP_CBAJ_T0040084.1 MGP_CBAJ_G0021397.1 mouse_genomes_project 15 983345 1033129 + Oxct1 protein_coding processed_transcript MGP_CBAJ_T0040085.1 MGP_CBAJ_G0021397.1 mouse_genomes_project 15 1099566 1117037 + Oxct1 protein_coding processed_transcript MGP_CBAJ_T0040086.1 MGP_CBAJ_G0021397.1 mouse_genomes_project 15 1099855 1117016 + Oxct1 protein_coding processed_transcript MGP_CBAJ_T0040479.1 MGP_CBAJ_G0021523.1 mouse_genomes_project 15 40313670 40332125 - MGP_CBAJ_P0040479 Slc25a32 protein_coding protein_coding MGP_CBAJ_T0040862.1 MGP_CBAJ_G0021658.1 mouse_genomes_project 15 80736749 80816125 + MGP_CBAJ_P0040862 Ly6l protein_coding protein_coding MGP_CBAJ_T0040249.1 MGP_CBAJ_G0021446.1 mouse_genomes_project 15 9963148 10040413 + MGP_CBAJ_P0040249 Zfr protein_coding protein_coding MGP_CBAJ_T0040250.1 MGP_CBAJ_G0021446.1 mouse_genomes_project 15 9963168 9994331 + MGP_CBAJ_P0040250 Zfr protein_coding protein_coding MGP_CBAJ_T0040251.1 MGP_CBAJ_G0021446.1 mouse_genomes_project 15 9963176 9986153 + MGP_CBAJ_P0040251 Zfr protein_coding protein_coding MGP_CBAJ_T0040252.1 MGP_CBAJ_G0021446.1 mouse_genomes_project 15 9963183 9968495 + Zfr protein_coding processed_transcript MGP_CBAJ_T0040253.1 MGP_CBAJ_G0021446.1 mouse_genomes_project 15 10007717 10016690 + MGP_CBAJ_P0040253 Zfr protein_coding nonsense_mediated_decay MGP_CBAJ_T0040254.1 MGP_CBAJ_G0021446.1 mouse_genomes_project 15 10008638 10038723 + MGP_CBAJ_P0040254 Zfr protein_coding protein_coding MGP_CBAJ_T0040255.1 MGP_CBAJ_G0021446.1 mouse_genomes_project 15 10016628 10039193 + MGP_CBAJ_P0040255 Zfr protein_coding nonsense_mediated_decay MGP_CBAJ_T0040256.1 MGP_CBAJ_G0021446.1 mouse_genomes_project 15 10020745 10022256 + Zfr protein_coding retained_intron MGP_CBAJ_T0040257.1 MGP_CBAJ_G0021446.1 mouse_genomes_project 15 10031694 10039193 + Zfr protein_coding processed_transcript MGP_CBAJ_T0098888.1 MGP_CBAJ_G0037143.1 mouse_genomes_project 15 37014110 37014269 + Gm22979 snRNA snRNA MGP_CBAJ_T0100153.1 MGP_CBAJ_G0038408.1 mouse_genomes_project 15 30172233 30172306 - Gm24554 snoRNA snoRNA MGP_CBAJ_T0003548.1 MGP_CBAJ_G0003216.1 mouse_genomes_project 15 93429152 93430575 + Gm15569 antisense antisense MGP_CBAJ_T0041930.1 MGP_CBAJ_G0021959.1 mouse_genomes_project 15 101715426 101831481 - MGP_CBAJ_P0041930 Prickle1 protein_coding protein_coding MGP_CBAJ_T0041931.1 MGP_CBAJ_G0021959.1 mouse_genomes_project 15 101715426 101739587 - MGP_CBAJ_P0041931 Prickle1 protein_coding protein_coding MGP_CBAJ_T0040466.1 MGP_CBAJ_G0021518.1 mouse_genomes_project 15 39666049 39700727 - MGP_CBAJ_P0040466 Azin1 protein_coding protein_coding MGP_CBAJ_T0040467.1 MGP_CBAJ_G0021518.1 mouse_genomes_project 15 39666884 39700571 - MGP_CBAJ_P0040467 Azin1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040468.1 MGP_CBAJ_G0021518.1 mouse_genomes_project 15 39671335 39676034 - Azin1 protein_coding retained_intron MGP_CBAJ_T0040469.1 MGP_CBAJ_G0021518.1 mouse_genomes_project 15 39677311 39699564 - MGP_CBAJ_P0040469 Azin1 protein_coding protein_coding MGP_CBAJ_T0040470.1 MGP_CBAJ_G0021518.1 mouse_genomes_project 15 39679080 39699623 - MGP_CBAJ_P0040470 Azin1 protein_coding protein_coding MGP_CBAJ_T0040471.1 MGP_CBAJ_G0021518.1 mouse_genomes_project 15 39695873 39700652 - Azin1 protein_coding processed_transcript MGP_CBAJ_T0009939.1 MGP_CBAJ_G0008077.1 mouse_genomes_project 15 85469163 85469244 + Gm44302 miRNA miRNA MGP_CBAJ_T0009914.1 MGP_CBAJ_G0008052.1 mouse_genomes_project 15 36439271 36439349 - Mir875 miRNA miRNA MGP_CBAJ_T0040233.1 MGP_CBAJ_G0021436.1 mouse_genomes_project 15 8109600 8144769 - MGP_CBAJ_P0040233 Ttc23l protein_coding protein_coding MGP_CBAJ_T0040234.1 MGP_CBAJ_G0021436.1 mouse_genomes_project 15 8113445 8172098 - MGP_CBAJ_P0040234 Ttc23l protein_coding protein_coding MGP_CBAJ_T0040235.1 MGP_CBAJ_G0021436.1 mouse_genomes_project 15 8151755 8172080 - MGP_CBAJ_P0040235 Ttc23l protein_coding protein_coding MGP_CBAJ_T0041866.1 MGP_CBAJ_G0021942.1 mouse_genomes_project 15 97268421 97274677 + MGP_CBAJ_P0041866 Acr protein_coding protein_coding MGP_CBAJ_T0041432.1 MGP_CBAJ_G0021810.1 mouse_genomes_project 15 87251548 87452131 - MGP_CBAJ_P0041432 Mkl1 protein_coding protein_coding MGP_CBAJ_T0041433.1 MGP_CBAJ_G0021810.1 mouse_genomes_project 15 87251548 87452107 - MGP_CBAJ_P0041433 Mkl1 protein_coding protein_coding MGP_CBAJ_T0041434.1 MGP_CBAJ_G0021810.1 mouse_genomes_project 15 87251558 87358633 - MGP_CBAJ_P0041434 Mkl1 protein_coding protein_coding MGP_CBAJ_T0041435.1 MGP_CBAJ_G0021810.1 mouse_genomes_project 15 87251558 87452097 - MGP_CBAJ_P0041435 Mkl1 protein_coding protein_coding MGP_CBAJ_T0041436.1 MGP_CBAJ_G0021810.1 mouse_genomes_project 15 87255121 87290514 - MGP_CBAJ_P0041436 Mkl1 protein_coding protein_coding MGP_CBAJ_T0041437.1 MGP_CBAJ_G0021810.1 mouse_genomes_project 15 87256030 87257456 - Mkl1 protein_coding retained_intron MGP_CBAJ_T0041438.1 MGP_CBAJ_G0021810.1 mouse_genomes_project 15 87259505 87260570 - Mkl1 protein_coding retained_intron MGP_CBAJ_T0041439.1 MGP_CBAJ_G0021810.1 mouse_genomes_project 15 87261756 87265817 - Mkl1 protein_coding retained_intron MGP_CBAJ_T0041440.1 MGP_CBAJ_G0021810.1 mouse_genomes_project 15 87268214 87452102 - Mkl1 protein_coding retained_intron MGP_CBAJ_T0041441.1 MGP_CBAJ_G0021810.1 mouse_genomes_project 15 87290100 87451896 - Mkl1 protein_coding retained_intron MGP_CBAJ_T0041939.1 MGP_CBAJ_G0021962.1 mouse_genomes_project 15 102879749 102908301 + MGP_CBAJ_P0041939 Irak4 protein_coding protein_coding MGP_CBAJ_T0041940.1 MGP_CBAJ_G0021962.1 mouse_genomes_project 15 102879759 102894497 + Irak4 protein_coding retained_intron MGP_CBAJ_T0041941.1 MGP_CBAJ_G0021962.1 mouse_genomes_project 15 102879778 102924564 + MGP_CBAJ_P0041941 Irak4 protein_coding protein_coding MGP_CBAJ_T0041942.1 MGP_CBAJ_G0021962.1 mouse_genomes_project 15 102880115 102907036 + MGP_CBAJ_P0041942 Irak4 protein_coding unknown_likely_coding MGP_CBAJ_T0041943.1 MGP_CBAJ_G0021962.1 mouse_genomes_project 15 102880118 102907036 + MGP_CBAJ_P0041943 Irak4 protein_coding unknown_likely_coding MGP_CBAJ_T0042243.1 MGP_CBAJ_G0022064.1 mouse_genomes_project 15 110159505 110181819 - MGP_CBAJ_P0042243 Cela1 protein_coding protein_coding MGP_CBAJ_T0042319.1 MGP_CBAJ_G0022098.1 mouse_genomes_project 15 111818263 111822070 + MGP_CBAJ_P0042319 Krt18 protein_coding protein_coding MGP_CBAJ_T0042316.1 MGP_CBAJ_G0022095.1 mouse_genomes_project 15 111690143 111704942 - MGP_CBAJ_P0042316 Krt79 protein_coding protein_coding MGP_CBAJ_T0042306.1 MGP_CBAJ_G0022086.1 mouse_genomes_project 15 111474075 111486374 - MGP_CBAJ_P0042306 Krt71 protein_coding protein_coding MGP_CBAJ_T0040939.1 MGP_CBAJ_G0021681.1 mouse_genomes_project 15 81493013 81498920 - MGP_CBAJ_P0040939 protein_coding protein_coding MGP_CBAJ_T0042253.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110395010 110481806 + MGP_CBAJ_P0042253 Scn8a protein_coding protein_coding MGP_CBAJ_T0042254.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110395010 110481806 + MGP_CBAJ_P0042254 Scn8a protein_coding protein_coding MGP_CBAJ_T0042255.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110395797 110570557 + MGP_CBAJ_P0042255 Scn8a protein_coding protein_coding MGP_CBAJ_T0042256.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110395813 110481806 + MGP_CBAJ_P0042256 Scn8a protein_coding protein_coding MGP_CBAJ_T0042257.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110395835 110605290 + MGP_CBAJ_P0042257 Scn8a protein_coding protein_coding MGP_CBAJ_T0042258.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110399055 110605299 + MGP_CBAJ_P0042258 Scn8a protein_coding protein_coding MGP_CBAJ_T0042259.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110399096 110601045 + MGP_CBAJ_P0042259 Scn8a protein_coding protein_coding MGP_CBAJ_T0042260.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110399103 110600962 + MGP_CBAJ_P0042260 Scn8a protein_coding protein_coding MGP_CBAJ_T0042261.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110399571 110481806 + MGP_CBAJ_P0042261 Scn8a protein_coding protein_coding MGP_CBAJ_T0042262.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110478907 110486279 + MGP_CBAJ_P0042262 Scn8a protein_coding protein_coding MGP_CBAJ_T0042263.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110481749 110605290 + MGP_CBAJ_P0042263 Scn8a protein_coding protein_coding MGP_CBAJ_T0042264.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110481784 110485902 + MGP_CBAJ_P0042264 Scn8a protein_coding protein_coding MGP_CBAJ_T0042265.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110481803 110600039 + MGP_CBAJ_P0042265 Scn8a protein_coding protein_coding MGP_CBAJ_T0042266.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110509940 110515896 + MGP_CBAJ_P0042266 Scn8a protein_coding protein_coding MGP_CBAJ_T0042267.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110511351 110514219 + Scn8a protein_coding retained_intron MGP_CBAJ_T0042268.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110511386 110514066 + Scn8a protein_coding retained_intron MGP_CBAJ_T0042269.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110511515 110561707 + MGP_CBAJ_P0042269 Scn8a protein_coding protein_coding MGP_CBAJ_T0042270.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110526365 110528006 + Scn8a protein_coding retained_intron MGP_CBAJ_T0042271.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110527890 110532514 + Scn8a protein_coding retained_intron MGP_CBAJ_T0042272.1 MGP_CBAJ_G0022067.1 mouse_genomes_project 15 110575357 110589171 + Scn8a protein_coding processed_transcript MGP_CBAJ_T0100160.1 MGP_CBAJ_G0038415.1 mouse_genomes_project 15 35060153 35060285 - Gm24523 snoRNA snoRNA MGP_CBAJ_T0041706.1 MGP_CBAJ_G0021899.1 mouse_genomes_project 15 92992970 93029065 + MGP_CBAJ_P0041706 Ttc38 protein_coding protein_coding MGP_CBAJ_T0041707.1 MGP_CBAJ_G0021899.1 mouse_genomes_project 15 92993008 93027982 + Ttc38 protein_coding processed_transcript MGP_CBAJ_T0041708.1 MGP_CBAJ_G0021899.1 mouse_genomes_project 15 92993008 93007556 + MGP_CBAJ_P0041708 Ttc38 protein_coding nonsense_mediated_decay MGP_CBAJ_T0000913.1 MGP_CBAJ_G0000848.1 mouse_genomes_project 15 113391329 113391666 + TEC TEC MGP_CBAJ_T0041757.1 MGP_CBAJ_G0021916.1 mouse_genomes_project 15 96670773 96680924 + MGP_CBAJ_P0041757 Panx2 protein_coding protein_coding MGP_CBAJ_T0041758.1 MGP_CBAJ_G0021916.1 mouse_genomes_project 15 96670786 96681953 + MGP_CBAJ_P0041758 Panx2 protein_coding protein_coding MGP_CBAJ_T0041759.1 MGP_CBAJ_G0021916.1 mouse_genomes_project 15 96680718 96684620 + MGP_CBAJ_P0041759 Panx2 protein_coding protein_coding MGP_CBAJ_T0009969.1 MGP_CBAJ_G0008107.1 mouse_genomes_project 15 107491960 107492077 - Mir1291 miRNA miRNA MGP_CBAJ_T0009915.1 MGP_CBAJ_G0008053.1 mouse_genomes_project 15 37094408 37094527 - Mir8097 miRNA miRNA MGP_CBAJ_T0100182.1 MGP_CBAJ_G0038437.1 mouse_genomes_project 15 91209070 91209214 - Gm22890 snoRNA snoRNA MGP_CBAJ_T0000901.1 MGP_CBAJ_G0000836.1 mouse_genomes_project 15 19288995 19289932 - TEC TEC MGP_CBAJ_T0100188.1 MGP_CBAJ_G0038443.1 mouse_genomes_project 15 108260276 108260382 - Gm25183 snoRNA snoRNA MGP_CBAJ_T0042434.1 MGP_CBAJ_G0022127.1 mouse_genomes_project 15 112898304 112900166 + MGP_CBAJ_P0042434 Hoxc12 protein_coding protein_coding MGP_CBAJ_T0042366.1 MGP_CBAJ_G0022113.1 mouse_genomes_project 15 112224645 112237403 - MGP_CBAJ_P0042366 Sp7 protein_coding protein_coding MGP_CBAJ_T0009943.1 MGP_CBAJ_G0008081.1 mouse_genomes_project 15 86845407 86845471 + Mir6957 miRNA miRNA MGP_CBAJ_T0009960.1 MGP_CBAJ_G0008098.1 mouse_genomes_project 15 92835142 92835227 + Mirlet7b miRNA miRNA MGP_CBAJ_T0040564.1 MGP_CBAJ_G0021562.1 mouse_genomes_project 15 58232593 58246982 - MGP_CBAJ_P0040564 Dscc1 protein_coding protein_coding MGP_CBAJ_T0040565.1 MGP_CBAJ_G0021562.1 mouse_genomes_project 15 58232596 58246971 - MGP_CBAJ_P0040565 Dscc1 protein_coding protein_coding MGP_CBAJ_T0040566.1 MGP_CBAJ_G0021562.1 mouse_genomes_project 15 58240215 58244254 - Dscc1 protein_coding retained_intron MGP_CBAJ_T0101049.1 MGP_CBAJ_G0039273.1 mouse_genomes_project 15 62912730 62917779 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101050.1 MGP_CBAJ_G0039273.1 mouse_genomes_project 15 62916618 62917696 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0000905.1 MGP_CBAJ_G0000840.1 mouse_genomes_project 15 67499429 67515286 + TEC TEC MGP_CBAJ_T0012901.1 MGP_CBAJ_G0011013.1 mouse_genomes_project 15 38356812 38357490 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0040382.1 MGP_CBAJ_G0021491.1 mouse_genomes_project 15 35075413 35100220 + MGP_CBAJ_P0040382 Erich5 protein_coding protein_coding MGP_CBAJ_T0040362.1 MGP_CBAJ_G0021486.1 mouse_genomes_project 15 34641229 34661843 + Mtdh protein_coding retained_intron MGP_CBAJ_T0040363.1 MGP_CBAJ_G0021486.1 mouse_genomes_project 15 34641254 34705055 + MGP_CBAJ_P0040363 Mtdh protein_coding protein_coding MGP_CBAJ_T0040364.1 MGP_CBAJ_G0021486.1 mouse_genomes_project 15 34641260 34687028 + Mtdh protein_coding retained_intron MGP_CBAJ_T0040365.1 MGP_CBAJ_G0021486.1 mouse_genomes_project 15 34641571 34697013 + MGP_CBAJ_P0040365 Mtdh protein_coding nonsense_mediated_decay MGP_CBAJ_T0040366.1 MGP_CBAJ_G0021486.1 mouse_genomes_project 15 34641843 34699449 + MGP_CBAJ_P0040366 Mtdh protein_coding protein_coding MGP_CBAJ_T0040367.1 MGP_CBAJ_G0021486.1 mouse_genomes_project 15 34641854 34699480 + MGP_CBAJ_P0040367 Mtdh protein_coding protein_coding MGP_CBAJ_T0040368.1 MGP_CBAJ_G0021486.1 mouse_genomes_project 15 34641857 34686426 + MGP_CBAJ_P0040368 Mtdh protein_coding protein_coding MGP_CBAJ_T0040369.1 MGP_CBAJ_G0021486.1 mouse_genomes_project 15 34642388 34680673 + Mtdh protein_coding processed_transcript MGP_CBAJ_T0040370.1 MGP_CBAJ_G0021486.1 mouse_genomes_project 15 34677629 34703379 + MGP_CBAJ_P0040370 Mtdh protein_coding protein_coding MGP_CBAJ_T0040371.1 MGP_CBAJ_G0021486.1 mouse_genomes_project 15 34696188 34703952 + Mtdh protein_coding processed_transcript MGP_CBAJ_T0040918.1 MGP_CBAJ_G0021675.1 mouse_genomes_project 15 81381388 81383972 - MGP_CBAJ_P0040918 Ccdc166 protein_coding protein_coding MGP_CBAJ_T0040919.1 MGP_CBAJ_G0021675.1 mouse_genomes_project 15 81382283 81383959 - MGP_CBAJ_P0040919 Ccdc166 protein_coding protein_coding MGP_CBAJ_T0042234.1 MGP_CBAJ_G0022062.1 mouse_genomes_project 15 110098472 110116712 - MGP_CBAJ_P0042234 Smagp protein_coding protein_coding MGP_CBAJ_T0042235.1 MGP_CBAJ_G0022062.1 mouse_genomes_project 15 110098472 110116702 - MGP_CBAJ_P0042235 Smagp protein_coding protein_coding MGP_CBAJ_T0041599.1 MGP_CBAJ_G0021861.1 mouse_genomes_project 15 89769445 89798845 - MGP_CBAJ_P0041599 Poldip3 protein_coding protein_coding MGP_CBAJ_T0041600.1 MGP_CBAJ_G0021861.1 mouse_genomes_project 15 89769445 89798898 - MGP_CBAJ_P0041600 Poldip3 protein_coding protein_coding MGP_CBAJ_T0041601.1 MGP_CBAJ_G0021861.1 mouse_genomes_project 15 89776530 89798815 - MGP_CBAJ_P0041601 Poldip3 protein_coding protein_coding MGP_CBAJ_T0041602.1 MGP_CBAJ_G0021861.1 mouse_genomes_project 15 89776625 89781616 - Poldip3 protein_coding retained_intron MGP_CBAJ_T0041603.1 MGP_CBAJ_G0021861.1 mouse_genomes_project 15 89781392 89798843 - Poldip3 protein_coding retained_intron MGP_CBAJ_T0041604.1 MGP_CBAJ_G0021861.1 mouse_genomes_project 15 89783673 89798850 - Poldip3 protein_coding retained_intron MGP_CBAJ_T0040160.1 MGP_CBAJ_G0021420.1 mouse_genomes_project 15 6039146 6138069 - MGP_CBAJ_P0040160 Slc1a3 protein_coding protein_coding MGP_CBAJ_T0040161.1 MGP_CBAJ_G0021420.1 mouse_genomes_project 15 6039749 6063598 - Slc1a3 protein_coding retained_intron MGP_CBAJ_T0040162.1 MGP_CBAJ_G0021420.1 mouse_genomes_project 15 6050609 6051606 - Slc1a3 protein_coding retained_intron MGP_CBAJ_T0040163.1 MGP_CBAJ_G0021420.1 mouse_genomes_project 15 6095721 6137721 - Slc1a3 protein_coding processed_transcript MGP_CBAJ_T0040164.1 MGP_CBAJ_G0021420.1 mouse_genomes_project 15 6101885 6137714 - MGP_CBAJ_P0040164 Slc1a3 protein_coding protein_coding MGP_CBAJ_T0040165.1 MGP_CBAJ_G0021420.1 mouse_genomes_project 15 6103767 6137801 - Slc1a3 protein_coding retained_intron MGP_CBAJ_T0040166.1 MGP_CBAJ_G0021420.1 mouse_genomes_project 15 6134914 6137786 - Slc1a3 protein_coding retained_intron MGP_CBAJ_T0040167.1 MGP_CBAJ_G0021420.1 mouse_genomes_project 15 6136047 6136893 - Slc1a3 protein_coding processed_transcript MGP_CBAJ_T0098883.1 MGP_CBAJ_G0037138.1 mouse_genomes_project 15 20293508 20293615 + Gm25101 snRNA snRNA MGP_CBAJ_T0009944.1 MGP_CBAJ_G0008082.1 mouse_genomes_project 15 87159873 87159955 + Mir5113 miRNA miRNA MGP_CBAJ_T0040520.1 MGP_CBAJ_G0021545.1 mouse_genomes_project 15 49791274 51210423 - MGP_CBAJ_P0040520 Csmd3 protein_coding protein_coding MGP_CBAJ_T0040521.1 MGP_CBAJ_G0021545.1 mouse_genomes_project 15 49791275 51210479 - MGP_CBAJ_P0040521 Csmd3 protein_coding protein_coding MGP_CBAJ_T0040522.1 MGP_CBAJ_G0021545.1 mouse_genomes_project 15 49791359 51210553 - MGP_CBAJ_P0040522 Csmd3 protein_coding protein_coding MGP_CBAJ_T0040523.1 MGP_CBAJ_G0021545.1 mouse_genomes_project 15 49792360 50285041 - MGP_CBAJ_P0040523 Csmd3 protein_coding protein_coding MGP_CBAJ_T0040524.1 MGP_CBAJ_G0021545.1 mouse_genomes_project 15 49792363 49834902 - Csmd3 protein_coding retained_intron MGP_CBAJ_T0040525.1 MGP_CBAJ_G0021545.1 mouse_genomes_project 15 49850633 49855440 - Csmd3 protein_coding retained_intron MGP_CBAJ_T0040526.1 MGP_CBAJ_G0021545.1 mouse_genomes_project 15 50224357 50238728 - Csmd3 protein_coding retained_intron MGP_CBAJ_T0040527.1 MGP_CBAJ_G0021545.1 mouse_genomes_project 15 50581686 51210479 - Csmd3 protein_coding processed_transcript MGP_CBAJ_T0040528.1 MGP_CBAJ_G0021545.1 mouse_genomes_project 15 50615477 51210479 - Csmd3 protein_coding retained_intron MGP_CBAJ_T0041544.1 MGP_CBAJ_G0021839.1 mouse_genomes_project 15 88645255 88651460 - MGP_CBAJ_P0041544 protein_coding protein_coding MGP_CBAJ_T0042440.1 MGP_CBAJ_G0022132.1 mouse_genomes_project 15 112957240 112960456 + MGP_CBAJ_P0042440 Hoxc8 protein_coding protein_coding MGP_CBAJ_T0042441.1 MGP_CBAJ_G0022132.1 mouse_genomes_project 15 112958522 112960746 + Hoxc8 protein_coding retained_intron MGP_CBAJ_T0098887.1 MGP_CBAJ_G0037142.1 mouse_genomes_project 15 35169270 35169380 + Gm22208 snRNA snRNA MGP_CBAJ_T0041769.1 MGP_CBAJ_G0021919.1 mouse_genomes_project 15 96714922 96739647 - MGP_CBAJ_P0041769 Tubgcp6 protein_coding protein_coding MGP_CBAJ_T0041770.1 MGP_CBAJ_G0021919.1 mouse_genomes_project 15 96715663 96717664 - Tubgcp6 protein_coding retained_intron MGP_CBAJ_T0041771.1 MGP_CBAJ_G0021919.1 mouse_genomes_project 15 96716975 96719169 - MGP_CBAJ_P0041771 Tubgcp6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041772.1 MGP_CBAJ_G0021919.1 mouse_genomes_project 15 96716975 96739446 - MGP_CBAJ_P0041772 Tubgcp6 protein_coding protein_coding MGP_CBAJ_T0041773.1 MGP_CBAJ_G0021919.1 mouse_genomes_project 15 96716999 96718109 - Tubgcp6 protein_coding retained_intron MGP_CBAJ_T0041774.1 MGP_CBAJ_G0021919.1 mouse_genomes_project 15 96717258 96717845 - Tubgcp6 protein_coding retained_intron MGP_CBAJ_T0041775.1 MGP_CBAJ_G0021919.1 mouse_genomes_project 15 96717282 96718580 - MGP_CBAJ_P0041775 Tubgcp6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041776.1 MGP_CBAJ_G0021919.1 mouse_genomes_project 15 96717577 96718746 - Tubgcp6 protein_coding retained_intron MGP_CBAJ_T0041777.1 MGP_CBAJ_G0021919.1 mouse_genomes_project 15 96718041 96718938 - MGP_CBAJ_P0041777 Tubgcp6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041778.1 MGP_CBAJ_G0021919.1 mouse_genomes_project 15 96720781 96723995 - MGP_CBAJ_P0041778 Tubgcp6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040325.1 MGP_CBAJ_G0021467.1 mouse_genomes_project 15 27360305 27496432 + MGP_CBAJ_P0040325 Ank protein_coding protein_coding MGP_CBAJ_T0040326.1 MGP_CBAJ_G0021467.1 mouse_genomes_project 15 27472983 27494686 + Ank protein_coding retained_intron MGP_CBAJ_T0040101.1 MGP_CBAJ_G0021405.1 mouse_genomes_project 15 2178962 2226862 + MGP_CBAJ_P0040101 Prkaa1 protein_coding protein_coding MGP_CBAJ_T0040826.1 MGP_CBAJ_G0021648.1 mouse_genomes_project 15 80004705 80016016 - MGP_CBAJ_P0040826 Cyp11b2 protein_coding protein_coding MGP_CBAJ_T0011265.1 MGP_CBAJ_G0009403.1 mouse_genomes_project 15 66108148 66108275 + Gm27957 misc_RNA misc_RNA MGP_CBAJ_T0041418.1 MGP_CBAJ_G0021808.1 mouse_genomes_project 15 87205596 87251557 + MGP_CBAJ_P0041418 Sgsm3 protein_coding protein_coding MGP_CBAJ_T0041419.1 MGP_CBAJ_G0021808.1 mouse_genomes_project 15 87205610 87245787 + MGP_CBAJ_P0041419 Sgsm3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041420.1 MGP_CBAJ_G0021808.1 mouse_genomes_project 15 87205630 87251557 + Sgsm3 protein_coding processed_transcript MGP_CBAJ_T0041421.1 MGP_CBAJ_G0021808.1 mouse_genomes_project 15 87205651 87243457 + Sgsm3 protein_coding processed_transcript MGP_CBAJ_T0041422.1 MGP_CBAJ_G0021808.1 mouse_genomes_project 15 87205651 87245769 + MGP_CBAJ_P0041422 Sgsm3 protein_coding protein_coding MGP_CBAJ_T0041423.1 MGP_CBAJ_G0021808.1 mouse_genomes_project 15 87205668 87243457 + Sgsm3 protein_coding processed_transcript MGP_CBAJ_T0041425.1 MGP_CBAJ_G0021808.1 mouse_genomes_project 15 87247209 87249218 + Sgsm3 protein_coding retained_intron MGP_CBAJ_T0041426.1 MGP_CBAJ_G0021808.1 mouse_genomes_project 15 87247630 87249804 + MGP_CBAJ_P0041426 Sgsm3 protein_coding protein_coding MGP_CBAJ_T0041427.1 MGP_CBAJ_G0021808.1 mouse_genomes_project 15 87248521 87249567 + Sgsm3 protein_coding retained_intron MGP_CBAJ_T0041428.1 MGP_CBAJ_G0021808.1 mouse_genomes_project 15 87249125 87251157 + Sgsm3 protein_coding retained_intron MGP_CBAJ_T0041429.1 MGP_CBAJ_G0021808.1 mouse_genomes_project 15 87249902 87251024 + Sgsm3 protein_coding retained_intron MGP_CBAJ_T0041430.1 MGP_CBAJ_G0021808.1 mouse_genomes_project 15 87249992 87251009 + Sgsm3 protein_coding retained_intron MGP_CBAJ_T0041431.1 MGP_CBAJ_G0021808.1 mouse_genomes_project 15 87250144 87250903 + Sgsm3 protein_coding retained_intron MGP_CBAJ_T0041647.1 MGP_CBAJ_G0021874.1 mouse_genomes_project 15 90895267 90933686 - MGP_CBAJ_P0041647 Sult4a1 protein_coding protein_coding MGP_CBAJ_T0042038.1 MGP_CBAJ_G0021994.1 mouse_genomes_project 15 107191428 107192072 - MGP_CBAJ_P0042038 protein_coding protein_coding MGP_CBAJ_T0042433.1 MGP_CBAJ_G0022126.1 mouse_genomes_project 15 112882662 112890374 + MGP_CBAJ_P0042433 Hoxc13 protein_coding protein_coding MGP_CBAJ_T0041966.1 MGP_CBAJ_G0021974.1 mouse_genomes_project 15 105409316 105409697 - MGP_CBAJ_P0041966 Gm8888 protein_coding protein_coding MGP_CBAJ_T0042297.1 MGP_CBAJ_G0022077.1 mouse_genomes_project 15 111074502 111086968 - MGP_CBAJ_P0042297 Krt87 protein_coding protein_coding MGP_CBAJ_T0041131.1 MGP_CBAJ_G0021723.1 mouse_genomes_project 15 82435397 82458523 - MGP_CBAJ_P0041131 Zfp647 protein_coding unknown_likely_coding MGP_CBAJ_T0101663.1 MGP_CBAJ_G0039694.1 mouse_genomes_project 15 80632499 80634675 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0040636.1 MGP_CBAJ_G0021590.1 mouse_genomes_project 15 62489110 62494788 + MGP_CBAJ_P0040636 Ndufb9 protein_coding protein_coding MGP_CBAJ_T0041175.1 MGP_CBAJ_G0021737.1 mouse_genomes_project 15 83662989 83684018 - MGP_CBAJ_P0041175 Foxred2 protein_coding protein_coding MGP_CBAJ_T0041176.1 MGP_CBAJ_G0021737.1 mouse_genomes_project 15 83662993 83668357 - Foxred2 protein_coding retained_intron MGP_CBAJ_T0041177.1 MGP_CBAJ_G0021737.1 mouse_genomes_project 15 83663487 83683971 - MGP_CBAJ_P0041177 Foxred2 protein_coding protein_coding MGP_CBAJ_T0041178.1 MGP_CBAJ_G0021737.1 mouse_genomes_project 15 83677582 83683979 - Foxred2 protein_coding retained_intron MGP_CBAJ_T0040504.1 MGP_CBAJ_G0021534.1 mouse_genomes_project 15 44705022 44870296 - MGP_CBAJ_P0040504 Rspo2 protein_coding unknown_likely_coding MGP_CBAJ_T0011270.1 MGP_CBAJ_G0009408.1 mouse_genomes_project 15 101410211 101410549 + Gm24447 misc_RNA misc_RNA MGP_CBAJ_T0041486.1 MGP_CBAJ_G0021822.1 mouse_genomes_project 15 88154023 88180954 + MGP_CBAJ_P0041486 Tef protein_coding protein_coding MGP_CBAJ_T0041487.1 MGP_CBAJ_G0021822.1 mouse_genomes_project 15 88154309 88157652 + Tef protein_coding processed_transcript MGP_CBAJ_T0041488.1 MGP_CBAJ_G0021822.1 mouse_genomes_project 15 88154332 88156957 + Tef protein_coding processed_transcript MGP_CBAJ_T0041489.1 MGP_CBAJ_G0021822.1 mouse_genomes_project 15 88154339 88168615 + Tef protein_coding retained_intron MGP_CBAJ_T0041490.1 MGP_CBAJ_G0021822.1 mouse_genomes_project 15 88154428 88157514 + Tef protein_coding processed_transcript MGP_CBAJ_T0041491.1 MGP_CBAJ_G0021822.1 mouse_genomes_project 15 88162648 88173989 + MGP_CBAJ_P0041491 Tef protein_coding protein_coding MGP_CBAJ_T0041492.1 MGP_CBAJ_G0021822.1 mouse_genomes_project 15 88163016 88180791 + MGP_CBAJ_P0041492 Tef protein_coding protein_coding MGP_CBAJ_T0041493.1 MGP_CBAJ_G0021822.1 mouse_genomes_project 15 88163761 88166812 + MGP_CBAJ_P0041493 Tef protein_coding protein_coding MGP_CBAJ_T0041494.1 MGP_CBAJ_G0021822.1 mouse_genomes_project 15 88173278 88174116 + Tef protein_coding processed_transcript MGP_CBAJ_T0041495.1 MGP_CBAJ_G0021822.1 mouse_genomes_project 15 88173675 88177872 + Tef protein_coding retained_intron MGP_CBAJ_T0006711.1 MGP_CBAJ_G0005527.1 mouse_genomes_project 15 108071483 108074816 + 4930578M01Rik lincRNA lincRNA MGP_CBAJ_T0040519.1 MGP_CBAJ_G0021544.1 mouse_genomes_project 15 46984630 46993259 - MGP_CBAJ_P0040519 Kcnv1 protein_coding protein_coding MGP_CBAJ_T0041101.1 MGP_CBAJ_G0021716.1 mouse_genomes_project 15 82195293 82198270 + MGP_CBAJ_P0041101 Lrrc14 protein_coding protein_coding MGP_CBAJ_T0041102.1 MGP_CBAJ_G0021716.1 mouse_genomes_project 15 82195308 82202398 + MGP_CBAJ_P0041102 Lrrc14 protein_coding protein_coding MGP_CBAJ_T0041103.1 MGP_CBAJ_G0021716.1 mouse_genomes_project 15 82195309 82199735 + MGP_CBAJ_P0041103 Lrrc14 protein_coding protein_coding MGP_CBAJ_T0041104.1 MGP_CBAJ_G0021716.1 mouse_genomes_project 15 82195313 82199784 + MGP_CBAJ_P0041104 Lrrc14 protein_coding protein_coding MGP_CBAJ_T0041105.1 MGP_CBAJ_G0021716.1 mouse_genomes_project 15 82195313 82199752 + MGP_CBAJ_P0041105 Lrrc14 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041106.1 MGP_CBAJ_G0021716.1 mouse_genomes_project 15 82195319 82197623 + MGP_CBAJ_P0041106 Lrrc14 protein_coding protein_coding MGP_CBAJ_T0041107.1 MGP_CBAJ_G0021716.1 mouse_genomes_project 15 82195333 82199830 + Lrrc14 protein_coding retained_intron MGP_CBAJ_T0041108.1 MGP_CBAJ_G0021716.1 mouse_genomes_project 15 82195343 82201348 + Lrrc14 protein_coding retained_intron MGP_CBAJ_T0041109.1 MGP_CBAJ_G0021716.1 mouse_genomes_project 15 82195343 82199449 + Lrrc14 protein_coding processed_transcript MGP_CBAJ_T0041110.1 MGP_CBAJ_G0021716.1 mouse_genomes_project 15 82195401 82199791 + MGP_CBAJ_P0041110 Lrrc14 protein_coding protein_coding MGP_CBAJ_T0040998.1 MGP_CBAJ_G0021692.1 mouse_genomes_project 15 81779169 81783249 - Sharpin protein_coding retained_intron MGP_CBAJ_T0040999.1 MGP_CBAJ_G0021692.1 mouse_genomes_project 15 81779169 81783250 - MGP_CBAJ_P0040999 Sharpin protein_coding protein_coding MGP_CBAJ_T0041000.1 MGP_CBAJ_G0021692.1 mouse_genomes_project 15 81779170 81783186 - Sharpin protein_coding retained_intron MGP_CBAJ_T0041001.1 MGP_CBAJ_G0021692.1 mouse_genomes_project 15 81779170 81783214 - Sharpin protein_coding retained_intron MGP_CBAJ_T0041002.1 MGP_CBAJ_G0021692.1 mouse_genomes_project 15 81779183 81779823 - MGP_CBAJ_P0041002 Sharpin protein_coding protein_coding MGP_CBAJ_T0041003.1 MGP_CBAJ_G0021692.1 mouse_genomes_project 15 81779247 81780334 - Sharpin protein_coding retained_intron MGP_CBAJ_T0041004.1 MGP_CBAJ_G0021692.1 mouse_genomes_project 15 81779767 81782889 - MGP_CBAJ_P0041004 Sharpin protein_coding nonsense_mediated_decay MGP_CBAJ_T0041005.1 MGP_CBAJ_G0021692.1 mouse_genomes_project 15 81779987 81782830 - Sharpin protein_coding retained_intron MGP_CBAJ_T0041006.1 MGP_CBAJ_G0021692.1 mouse_genomes_project 15 81780035 81782821 - Sharpin protein_coding retained_intron MGP_CBAJ_T0041007.1 MGP_CBAJ_G0021692.1 mouse_genomes_project 15 81780750 81782851 - Sharpin protein_coding retained_intron MGP_CBAJ_T0003558.1 MGP_CBAJ_G0003224.1 mouse_genomes_project 15 108966614 108975466 - Gm16537 antisense antisense MGP_CBAJ_T0040495.1 MGP_CBAJ_G0021530.1 mouse_genomes_project 15 42040807 42547246 + MGP_CBAJ_P0040495 Zfpm2 protein_coding protein_coding MGP_CBAJ_T0041132.1 MGP_CBAJ_G0021724.1 mouse_genomes_project 15 82483765 82485985 + MGP_CBAJ_P0041132 1110038F14Rik protein_coding protein_coding MGP_CBAJ_T0012913.1 MGP_CBAJ_G0011025.1 mouse_genomes_project 15 57923204 57924186 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0040068.1 MGP_CBAJ_G0021394.1 mouse_genomes_project 15 205189 499165 - MGP_CBAJ_P0040068 Ghr protein_coding protein_coding MGP_CBAJ_T0040069.1 MGP_CBAJ_G0021394.1 mouse_genomes_project 15 206438 497722 - MGP_CBAJ_P0040069 Ghr protein_coding protein_coding MGP_CBAJ_T0040070.1 MGP_CBAJ_G0021394.1 mouse_genomes_project 15 214853 499123 - MGP_CBAJ_P0040070 Ghr protein_coding protein_coding MGP_CBAJ_T0040071.1 MGP_CBAJ_G0021394.1 mouse_genomes_project 15 214867 379141 - MGP_CBAJ_P0040071 Ghr protein_coding protein_coding MGP_CBAJ_T0040072.1 MGP_CBAJ_G0021394.1 mouse_genomes_project 15 220765 498476 - MGP_CBAJ_P0040072 Ghr protein_coding protein_coding MGP_CBAJ_T0040073.1 MGP_CBAJ_G0021394.1 mouse_genomes_project 15 229070 499123 - Ghr protein_coding processed_transcript MGP_CBAJ_T0040074.1 MGP_CBAJ_G0021394.1 mouse_genomes_project 15 236030 499147 - Ghr protein_coding retained_intron MGP_CBAJ_T0040075.1 MGP_CBAJ_G0021394.1 mouse_genomes_project 15 237312 499146 - Ghr protein_coding processed_transcript MGP_CBAJ_T0040076.1 MGP_CBAJ_G0021394.1 mouse_genomes_project 15 279325 499427 - Ghr protein_coding retained_intron MGP_CBAJ_T0040077.1 MGP_CBAJ_G0021394.1 mouse_genomes_project 15 459691 499122 - Ghr protein_coding processed_transcript MGP_CBAJ_T0041745.1 MGP_CBAJ_G0021913.1 mouse_genomes_project 15 96492843 96565214 - MGP_CBAJ_P0041745 Ttll8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041746.1 MGP_CBAJ_G0021913.1 mouse_genomes_project 15 96521762 96565206 - MGP_CBAJ_P0041746 Ttll8 protein_coding protein_coding MGP_CBAJ_T0041747.1 MGP_CBAJ_G0021913.1 mouse_genomes_project 15 96521818 96564855 - MGP_CBAJ_P0041747 Ttll8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041748.1 MGP_CBAJ_G0021913.1 mouse_genomes_project 15 96521896 96565406 - MGP_CBAJ_P0041748 Ttll8 protein_coding unknown_likely_coding MGP_CBAJ_T0041749.1 MGP_CBAJ_G0021913.1 mouse_genomes_project 15 96523533 96527733 - Ttll8 protein_coding retained_intron MGP_CBAJ_T0042186.1 MGP_CBAJ_G0022046.1 mouse_genomes_project 15 109209730 109226898 - MGP_CBAJ_P0042186 protein_coding protein_coding MGP_CBAJ_T0042187.1 MGP_CBAJ_G0022046.1 mouse_genomes_project 15 109209735 109268096 - MGP_CBAJ_P0042187 protein_coding protein_coding MGP_CBAJ_T0012902.1 MGP_CBAJ_G0011014.1 mouse_genomes_project 15 38460846 38462293 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0041275.1 MGP_CBAJ_G0021770.1 mouse_genomes_project 15 85082521 85092127 - MGP_CBAJ_P0041275 Sox10 protein_coding protein_coding MGP_CBAJ_T0041624.1 MGP_CBAJ_G0021871.1 mouse_genomes_project 15 90337322 90473508 - MGP_CBAJ_P0041624 Scube1 protein_coding protein_coding MGP_CBAJ_T0041625.1 MGP_CBAJ_G0021871.1 mouse_genomes_project 15 90339738 90473508 - Scube1 protein_coding retained_intron MGP_CBAJ_T0041626.1 MGP_CBAJ_G0021871.1 mouse_genomes_project 15 90339742 90473508 - MGP_CBAJ_P0041626 Scube1 protein_coding protein_coding MGP_CBAJ_T0041627.1 MGP_CBAJ_G0021871.1 mouse_genomes_project 15 90341245 90473508 - MGP_CBAJ_P0041627 Scube1 protein_coding protein_coding MGP_CBAJ_T0041628.1 MGP_CBAJ_G0021871.1 mouse_genomes_project 15 90341245 90473508 - MGP_CBAJ_P0041628 Scube1 protein_coding protein_coding MGP_CBAJ_T0040126.1 MGP_CBAJ_G0021410.1 mouse_genomes_project 15 3760761 3876520 + MGP_CBAJ_P0040126 Fyb protein_coding protein_coding MGP_CBAJ_T0040127.1 MGP_CBAJ_G0021410.1 mouse_genomes_project 15 3773583 3822197 + Fyb protein_coding retained_intron MGP_CBAJ_T0040128.1 MGP_CBAJ_G0021410.1 mouse_genomes_project 15 3778693 3840281 + MGP_CBAJ_P0040128 Fyb protein_coding protein_coding MGP_CBAJ_T0040129.1 MGP_CBAJ_G0021410.1 mouse_genomes_project 15 3821182 3837889 + Fyb protein_coding retained_intron MGP_CBAJ_T0040130.1 MGP_CBAJ_G0021410.1 mouse_genomes_project 15 3851821 3874082 + MGP_CBAJ_P0040130 Fyb protein_coding protein_coding MGP_CBAJ_T0040131.1 MGP_CBAJ_G0021410.1 mouse_genomes_project 15 3857071 3862867 + Fyb protein_coding retained_intron MGP_CBAJ_T0040132.1 MGP_CBAJ_G0021410.1 mouse_genomes_project 15 3873610 3876457 + Fyb protein_coding retained_intron MGP_CBAJ_T0011267.1 MGP_CBAJ_G0009405.1 mouse_genomes_project 15 84184833 84184943 + Gm26329 misc_RNA misc_RNA MGP_CBAJ_T0042026.1 MGP_CBAJ_G0021987.1 mouse_genomes_project 15 106931217 106975086 + MGP_CBAJ_P0042026 Pfkm protein_coding protein_coding MGP_CBAJ_T0012936.1 MGP_CBAJ_G0011048.1 mouse_genomes_project 15 99446191 99447634 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0040242.1 MGP_CBAJ_G0021441.1 mouse_genomes_project 15 8715770 8720045 - MGP_CBAJ_P0040242 Rxfp3 protein_coding protein_coding MGP_CBAJ_T0042218.1 MGP_CBAJ_G0022056.1 mouse_genomes_project 15 109866043 109871361 + MGP_CBAJ_P0042218 Gm5475 protein_coding protein_coding MGP_CBAJ_T0042219.1 MGP_CBAJ_G0022056.1 mouse_genomes_project 15 109867089 109872036 + MGP_CBAJ_P0042219 Gm5475 protein_coding protein_coding MGP_CBAJ_T0041326.1 MGP_CBAJ_G0021782.1 mouse_genomes_project 15 85627911 85679601 - MGP_CBAJ_P0041326 Fam227a protein_coding protein_coding MGP_CBAJ_T0041327.1 MGP_CBAJ_G0021782.1 mouse_genomes_project 15 85630374 85679438 - MGP_CBAJ_P0041327 Fam227a protein_coding protein_coding MGP_CBAJ_T0041328.1 MGP_CBAJ_G0021782.1 mouse_genomes_project 15 85630428 85679438 - MGP_CBAJ_P0041328 Fam227a protein_coding nonsense_mediated_decay MGP_CBAJ_T0041329.1 MGP_CBAJ_G0021782.1 mouse_genomes_project 15 85643644 85670586 - MGP_CBAJ_P0041329 Fam227a protein_coding protein_coding MGP_CBAJ_T0041330.1 MGP_CBAJ_G0021782.1 mouse_genomes_project 15 85656135 85679601 - Fam227a protein_coding retained_intron MGP_CBAJ_T0100145.1 MGP_CBAJ_G0038400.1 mouse_genomes_project 15 3297196 3297328 - Gm23139 snoRNA snoRNA MGP_CBAJ_T0009938.1 MGP_CBAJ_G0008076.1 mouse_genomes_project 15 85347099 85347172 - Mir1943 miRNA miRNA MGP_CBAJ_T0040506.1 MGP_CBAJ_G0021536.1 mouse_genomes_project 15 45212542 45259738 + MGP_CBAJ_P0040506 Emc2 protein_coding protein_coding MGP_CBAJ_T0012927.1 MGP_CBAJ_G0011039.1 mouse_genomes_project 15 84381199 84381637 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098910.1 MGP_CBAJ_G0037165.1 mouse_genomes_project 15 81443899 81444057 + Gm23027 snRNA snRNA MGP_CBAJ_T0100181.1 MGP_CBAJ_G0038436.1 mouse_genomes_project 15 86633218 86633355 - Gm23220 snoRNA snoRNA MGP_CBAJ_T0100147.1 MGP_CBAJ_G0038402.1 mouse_genomes_project 15 14181833 14181961 + Gm25550 snoRNA snoRNA MGP_CBAJ_T0042467.1 MGP_CBAJ_G0022142.1 mouse_genomes_project 15 113357799 113379990 - MGP_CBAJ_P0042467 Itga5 protein_coding protein_coding MGP_CBAJ_T0042308.1 MGP_CBAJ_G0022088.1 mouse_genomes_project 15 111524143 111537243 - MGP_CBAJ_P0042308 Krt72 protein_coding protein_coding MGP_CBAJ_T0042309.1 MGP_CBAJ_G0022088.1 mouse_genomes_project 15 111524304 111526647 - Krt72 protein_coding processed_transcript MGP_CBAJ_T0040543.1 MGP_CBAJ_G0021550.1 mouse_genomes_project 15 54918229 54923845 + MGP_CBAJ_P0040543 Aard protein_coding protein_coding MGP_CBAJ_T0042149.1 MGP_CBAJ_G0022034.1 mouse_genomes_project 15 108686671 108723159 - MGP_CBAJ_P0042149 Faim2 protein_coding protein_coding MGP_CBAJ_T0006722.1 MGP_CBAJ_G0005537.1 mouse_genomes_project 15 113099048 113124366 - D930007P13Rik lincRNA lincRNA MGP_CBAJ_T0041087.1 MGP_CBAJ_G0021711.1 mouse_genomes_project 15 82152333 82153998 - MGP_CBAJ_P0041087 Foxh1 protein_coding protein_coding MGP_CBAJ_T0042076.1 MGP_CBAJ_G0022008.1 mouse_genomes_project 15 107663518 107679588 - MGP_CBAJ_P0042076 Rnd1 protein_coding protein_coding MGP_CBAJ_T0042077.1 MGP_CBAJ_G0022008.1 mouse_genomes_project 15 107671367 107679589 - MGP_CBAJ_P0042077 Rnd1 protein_coding protein_coding MGP_CBAJ_T0042078.1 MGP_CBAJ_G0022008.1 mouse_genomes_project 15 107674357 107679586 - MGP_CBAJ_P0042078 Rnd1 protein_coding protein_coding MGP_CBAJ_T0041912.1 MGP_CBAJ_G0021954.1 mouse_genomes_project 15 100510279 100915428 + MGP_CBAJ_P0041912 Pdzrn4 protein_coding protein_coding MGP_CBAJ_T0041913.1 MGP_CBAJ_G0021954.1 mouse_genomes_project 15 100738071 100915428 + MGP_CBAJ_P0041913 Pdzrn4 protein_coding protein_coding MGP_CBAJ_T0101665.1 MGP_CBAJ_G0039696.1 mouse_genomes_project 15 89374081 89380699 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0042274.1 MGP_CBAJ_G0022069.1 mouse_genomes_project 15 110693439 110697543 + MGP_CBAJ_P0042274 Ankrd33 protein_coding protein_coding MGP_CBAJ_T0041207.1 MGP_CBAJ_G0021748.1 mouse_genomes_project 15 84297732 84312244 - MGP_CBAJ_P0041207 Il2rb protein_coding protein_coding MGP_CBAJ_T0041208.1 MGP_CBAJ_G0021748.1 mouse_genomes_project 15 84298504 84310936 - MGP_CBAJ_P0041208 Il2rb protein_coding protein_coding MGP_CBAJ_T0040159.1 MGP_CBAJ_G0021419.1 mouse_genomes_project 15 5674603 5836568 - MGP_CBAJ_P0040159 Nipbl protein_coding protein_coding MGP_CBAJ_T0040652.1 MGP_CBAJ_G0021599.1 mouse_genomes_project 15 65902633 65910800 + MGP_CBAJ_P0040652 Myc protein_coding protein_coding MGP_CBAJ_T0040653.1 MGP_CBAJ_G0021599.1 mouse_genomes_project 15 65904418 65910798 + MGP_CBAJ_P0040653 Myc protein_coding protein_coding MGP_CBAJ_T0040654.1 MGP_CBAJ_G0021599.1 mouse_genomes_project 15 65904591 65910822 + MGP_CBAJ_P0040654 Myc protein_coding protein_coding MGP_CBAJ_T0040655.1 MGP_CBAJ_G0021599.1 mouse_genomes_project 15 65904649 65910515 + MGP_CBAJ_P0040655 Myc protein_coding protein_coding MGP_CBAJ_T0040656.1 MGP_CBAJ_G0021599.1 mouse_genomes_project 15 65904949 65910356 + MGP_CBAJ_P0040656 Myc protein_coding protein_coding MGP_CBAJ_T0040657.1 MGP_CBAJ_G0021599.1 mouse_genomes_project 15 65906061 65906639 + MGP_CBAJ_P0040657 Myc protein_coding protein_coding MGP_CBAJ_T0040658.1 MGP_CBAJ_G0021599.1 mouse_genomes_project 15 65906443 65910701 + MGP_CBAJ_P0040658 Myc protein_coding protein_coding MGP_CBAJ_T0006651.1 MGP_CBAJ_G0005489.1 mouse_genomes_project 15 24719363 24772639 - Gm2824 lincRNA lincRNA MGP_CBAJ_T0006652.1 MGP_CBAJ_G0005489.1 mouse_genomes_project 15 24744748 24772582 - Gm2824 lincRNA lincRNA MGP_CBAJ_T0098894.1 MGP_CBAJ_G0037149.1 mouse_genomes_project 15 50919787 50919920 + Gm25007 snRNA snRNA MGP_CBAJ_T0012916.1 MGP_CBAJ_G0011028.1 mouse_genomes_project 15 63853714 63854287 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0040415.1 MGP_CBAJ_G0021504.1 mouse_genomes_project 15 37094296 37143631 - MGP_CBAJ_P0040415 Rnf19a protein_coding protein_coding MGP_CBAJ_T0041072.1 MGP_CBAJ_G0021707.1 mouse_genomes_project 15 82080951 82085411 - MGP_CBAJ_P0041072 Slc39a4 protein_coding protein_coding MGP_CBAJ_T0041563.1 MGP_CBAJ_G0021848.1 mouse_genomes_project 15 88836124 88845915 - MGP_CBAJ_P0041563 Cyp2d22 protein_coding protein_coding MGP_CBAJ_T0041209.1 MGP_CBAJ_G0021749.1 mouse_genomes_project 15 84343579 84351114 - C1qtnf6 protein_coding processed_transcript MGP_CBAJ_T0041210.1 MGP_CBAJ_G0021749.1 mouse_genomes_project 15 84343579 84351114 - MGP_CBAJ_P0041210 C1qtnf6 protein_coding protein_coding MGP_CBAJ_T0041211.1 MGP_CBAJ_G0021749.1 mouse_genomes_project 15 84345356 84347561 - C1qtnf6 protein_coding processed_transcript MGP_CBAJ_T0098286.1 MGP_CBAJ_G0036555.1 mouse_genomes_project 15 103502202 103578297 - 1700129L04Rik sense_intronic sense_intronic MGP_CBAJ_T0098287.1 MGP_CBAJ_G0036555.1 mouse_genomes_project 15 103502276 103562184 - 1700129L04Rik sense_intronic sense_intronic MGP_CBAJ_T0000898.1 MGP_CBAJ_G0000833.1 mouse_genomes_project 15 4971445 4971821 - TEC TEC MGP_CBAJ_T0041073.1 MGP_CBAJ_G0021708.1 mouse_genomes_project 15 82093680 82097594 - MGP_CBAJ_P0041073 Tonsl protein_coding protein_coding MGP_CBAJ_T0041074.1 MGP_CBAJ_G0021708.1 mouse_genomes_project 15 82097568 82100875 - MGP_CBAJ_P0041074 Tonsl protein_coding protein_coding MGP_CBAJ_T0041075.1 MGP_CBAJ_G0021708.1 mouse_genomes_project 15 82097803 82112833 - MGP_CBAJ_P0041075 Tonsl protein_coding protein_coding MGP_CBAJ_T0041076.1 MGP_CBAJ_G0021708.1 mouse_genomes_project 15 82097804 82100956 - Tonsl protein_coding retained_intron MGP_CBAJ_T0041077.1 MGP_CBAJ_G0021708.1 mouse_genomes_project 15 82104343 82105247 - MGP_CBAJ_P0041077 Tonsl protein_coding nonsense_mediated_decay MGP_CBAJ_T0041078.1 MGP_CBAJ_G0021708.1 mouse_genomes_project 15 82104376 82112804 - MGP_CBAJ_P0041078 Tonsl protein_coding nonsense_mediated_decay MGP_CBAJ_T0041079.1 MGP_CBAJ_G0021708.1 mouse_genomes_project 15 82110061 82111154 - Tonsl protein_coding retained_intron MGP_CBAJ_T0041080.1 MGP_CBAJ_G0021708.1 mouse_genomes_project 15 82111431 82112513 - Tonsl protein_coding retained_intron MGP_CBAJ_T0041081.1 MGP_CBAJ_G0021708.1 mouse_genomes_project 15 82111733 82112715 - MGP_CBAJ_P0041081 Tonsl protein_coding protein_coding MGP_CBAJ_T0009931.1 MGP_CBAJ_G0008069.1 mouse_genomes_project 15 81627462 81627525 - Mir1942 miRNA miRNA MGP_CBAJ_T0011256.1 MGP_CBAJ_G0009394.1 mouse_genomes_project 15 7606427 7606715 + Gm26350 misc_RNA misc_RNA MGP_CBAJ_T0101657.1 MGP_CBAJ_G0039688.1 mouse_genomes_project 15 80521942 80525369 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0041752.1 MGP_CBAJ_G0021915.1 mouse_genomes_project 15 96598070 96613461 + Mov10l1 protein_coding retained_intron MGP_CBAJ_T0041753.1 MGP_CBAJ_G0021915.1 mouse_genomes_project 15 96598070 96666188 + MGP_CBAJ_P0041753 Mov10l1 protein_coding protein_coding MGP_CBAJ_T0041754.1 MGP_CBAJ_G0021915.1 mouse_genomes_project 15 96598155 96666192 + MGP_CBAJ_P0041754 Mov10l1 protein_coding protein_coding MGP_CBAJ_T0041755.1 MGP_CBAJ_G0021915.1 mouse_genomes_project 15 96638731 96641932 + Mov10l1 protein_coding processed_transcript MGP_CBAJ_T0041756.1 MGP_CBAJ_G0021915.1 mouse_genomes_project 15 96641923 96666188 + MGP_CBAJ_P0041756 Mov10l1 protein_coding protein_coding MGP_CBAJ_T0012922.1 MGP_CBAJ_G0011034.1 mouse_genomes_project 15 81143261 81229974 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0040700.1 MGP_CBAJ_G0021607.1 mouse_genomes_project 15 70241813 70293962 - MGP_CBAJ_P0040700 Hhla1 protein_coding protein_coding MGP_CBAJ_T0012934.1 MGP_CBAJ_G0011046.1 mouse_genomes_project 15 92601773 92602181 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0041955.1 MGP_CBAJ_G0021969.1 mouse_genomes_project 15 104342896 104348330 - MGP_CBAJ_P0041955 Gm17546 protein_coding protein_coding MGP_CBAJ_T0101405.1 MGP_CBAJ_G0039461.1 mouse_genomes_project 15 81017349 81035728 + unitary_pseudogene processed_transcript MGP_CBAJ_T0101406.1 MGP_CBAJ_G0039461.1 mouse_genomes_project 15 81017695 81032677 + unitary_pseudogene processed_transcript MGP_CBAJ_T0101407.1 MGP_CBAJ_G0039461.1 mouse_genomes_project 15 81017704 81041942 + unitary_pseudogene processed_transcript MGP_CBAJ_T0101408.1 MGP_CBAJ_G0039461.1 mouse_genomes_project 15 81018706 81035258 + unitary_pseudogene unitary_pseudogene MGP_CBAJ_T0101409.1 MGP_CBAJ_G0039461.1 mouse_genomes_project 15 81032696 81035023 + unitary_pseudogene retained_intron MGP_CBAJ_T0101410.1 MGP_CBAJ_G0039461.1 mouse_genomes_project 15 81032860 81034776 + unitary_pseudogene processed_transcript MGP_CBAJ_T0100149.1 MGP_CBAJ_G0038404.1 mouse_genomes_project 15 20062249 20062377 + Gm25711 snoRNA snoRNA MGP_CBAJ_T0006714.1 MGP_CBAJ_G0005530.1 mouse_genomes_project 15 110823761 110826687 - A330009N23Rik lincRNA lincRNA MGP_CBAJ_T0100177.1 MGP_CBAJ_G0038432.1 mouse_genomes_project 15 74329944 74330073 - Gm23987 snoRNA snoRNA MGP_CBAJ_T0040245.1 MGP_CBAJ_G0021444.1 mouse_genomes_project 15 9651281 9733179 - MGP_CBAJ_P0040245 Npr3 protein_coding protein_coding MGP_CBAJ_T0041167.1 MGP_CBAJ_G0021736.1 mouse_genomes_project 15 83635170 83635824 - Txn2 protein_coding processed_transcript MGP_CBAJ_T0041168.1 MGP_CBAJ_G0021736.1 mouse_genomes_project 15 83635170 83650310 - MGP_CBAJ_P0041168 Txn2 protein_coding protein_coding MGP_CBAJ_T0041169.1 MGP_CBAJ_G0021736.1 mouse_genomes_project 15 83635170 83651473 - MGP_CBAJ_P0041169 Txn2 protein_coding protein_coding MGP_CBAJ_T0041170.1 MGP_CBAJ_G0021736.1 mouse_genomes_project 15 83635327 83650193 - MGP_CBAJ_P0041170 Txn2 protein_coding protein_coding MGP_CBAJ_T0041171.1 MGP_CBAJ_G0021736.1 mouse_genomes_project 15 83635333 83651435 - MGP_CBAJ_P0041171 Txn2 protein_coding protein_coding MGP_CBAJ_T0041172.1 MGP_CBAJ_G0021736.1 mouse_genomes_project 15 83639643 83650200 - MGP_CBAJ_P0041172 Txn2 protein_coding protein_coding MGP_CBAJ_T0041173.1 MGP_CBAJ_G0021736.1 mouse_genomes_project 15 83643342 83651441 - MGP_CBAJ_P0041173 Txn2 protein_coding protein_coding MGP_CBAJ_T0041174.1 MGP_CBAJ_G0021736.1 mouse_genomes_project 15 83648827 83651464 - MGP_CBAJ_P0041174 Txn2 protein_coding protein_coding MGP_CBAJ_T0042220.1 MGP_CBAJ_G0022057.1 mouse_genomes_project 15 109924035 109934313 + MGP_CBAJ_P0042220 Letmd1 protein_coding protein_coding MGP_CBAJ_T0040597.1 MGP_CBAJ_G0021572.1 mouse_genomes_project 15 61302732 61326042 - MGP_CBAJ_P0040597 Derl1 protein_coding protein_coding MGP_CBAJ_T0041381.1 MGP_CBAJ_G0021794.1 mouse_genomes_project 15 86077572 86096499 - MGP_CBAJ_P0041381 Pdgfb protein_coding protein_coding MGP_CBAJ_T0042001.1 MGP_CBAJ_G0021983.1 mouse_genomes_project 15 106659609 106713275 - MGP_CBAJ_P0042001 Vdr protein_coding protein_coding MGP_CBAJ_T0042002.1 MGP_CBAJ_G0021983.1 mouse_genomes_project 15 106662726 106664881 - Vdr protein_coding retained_intron MGP_CBAJ_T0042003.1 MGP_CBAJ_G0021983.1 mouse_genomes_project 15 106682017 106701821 - MGP_CBAJ_P0042003 Vdr protein_coding protein_coding MGP_CBAJ_T0042004.1 MGP_CBAJ_G0021983.1 mouse_genomes_project 15 106682089 106718597 - MGP_CBAJ_P0042004 Vdr protein_coding protein_coding MGP_CBAJ_T0042005.1 MGP_CBAJ_G0021983.1 mouse_genomes_project 15 106690062 106718597 - MGP_CBAJ_P0042005 Vdr protein_coding protein_coding MGP_CBAJ_T0042006.1 MGP_CBAJ_G0021983.1 mouse_genomes_project 15 106690074 106714527 - MGP_CBAJ_P0042006 Vdr protein_coding protein_coding MGP_CBAJ_T0041456.1 MGP_CBAJ_G0021815.1 mouse_genomes_project 15 87678023 87679397 - MGP_CBAJ_P0041456 Dnajb7 protein_coding protein_coding MGP_CBAJ_T0012898.1 MGP_CBAJ_G0011010.1 mouse_genomes_project 15 25503312 25503640 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009948.1 MGP_CBAJ_G0008086.1 mouse_genomes_project 15 88897762 88897848 + Gm25990 miRNA miRNA MGP_CBAJ_T0040571.1 MGP_CBAJ_G0021564.1 mouse_genomes_project 15 58268428 58431211 + MGP_CBAJ_P0040571 Deptor protein_coding protein_coding MGP_CBAJ_T0040572.1 MGP_CBAJ_G0021564.1 mouse_genomes_project 15 58268535 58385181 + MGP_CBAJ_P0040572 Deptor protein_coding protein_coding MGP_CBAJ_T0040573.1 MGP_CBAJ_G0021564.1 mouse_genomes_project 15 58289547 58426108 + MGP_CBAJ_P0040573 Deptor protein_coding protein_coding MGP_CBAJ_T0040133.1 MGP_CBAJ_G0021411.1 mouse_genomes_project 15 3927918 4021446 + MGP_CBAJ_P0040133 Rictor protein_coding protein_coding MGP_CBAJ_T0040343.1 MGP_CBAJ_G0021476.1 mouse_genomes_project 15 31743512 31757647 - MGP_CBAJ_P0040343 Ropn1l protein_coding protein_coding MGP_CBAJ_T0011268.1 MGP_CBAJ_G0009406.1 mouse_genomes_project 15 93380513 93380781 + Gm24011 misc_RNA misc_RNA MGP_CBAJ_T0041449.1 MGP_CBAJ_G0021814.1 mouse_genomes_project 15 87671233 87739823 + MGP_CBAJ_P0041449 Xpnpep3 protein_coding protein_coding MGP_CBAJ_T0041450.1 MGP_CBAJ_G0021814.1 mouse_genomes_project 15 87671245 87699042 + Xpnpep3 protein_coding retained_intron MGP_CBAJ_T0041451.1 MGP_CBAJ_G0021814.1 mouse_genomes_project 15 87671265 87687406 + Xpnpep3 protein_coding retained_intron MGP_CBAJ_T0041452.1 MGP_CBAJ_G0021814.1 mouse_genomes_project 15 87671291 87736047 + MGP_CBAJ_P0041452 Xpnpep3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041453.1 MGP_CBAJ_G0021814.1 mouse_genomes_project 15 87671292 87713405 + MGP_CBAJ_P0041453 Xpnpep3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041454.1 MGP_CBAJ_G0021814.1 mouse_genomes_project 15 87671319 87736047 + MGP_CBAJ_P0041454 Xpnpep3 protein_coding protein_coding MGP_CBAJ_T0041455.1 MGP_CBAJ_G0021814.1 mouse_genomes_project 15 87671328 87698626 + Xpnpep3 protein_coding processed_transcript MGP_CBAJ_T0041322.1 MGP_CBAJ_G0021778.1 mouse_genomes_project 15 85480492 85503418 - MGP_CBAJ_P0041322 Kcnj4 protein_coding protein_coding MGP_CBAJ_T0101658.1 MGP_CBAJ_G0039689.1 mouse_genomes_project 15 80586369 80586581 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0040720.1 MGP_CBAJ_G0021614.1 mouse_genomes_project 15 71277511 71309384 + MGP_CBAJ_P0040720 Wisp1 protein_coding protein_coding MGP_CBAJ_T0040721.1 MGP_CBAJ_G0021614.1 mouse_genomes_project 15 71277578 71306260 + MGP_CBAJ_P0040721 Wisp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040722.1 MGP_CBAJ_G0021614.1 mouse_genomes_project 15 71277699 71305638 + MGP_CBAJ_P0040722 Wisp1 protein_coding protein_coding MGP_CBAJ_T0040723.1 MGP_CBAJ_G0021614.1 mouse_genomes_project 15 71295499 71305418 + Wisp1 protein_coding processed_transcript MGP_CBAJ_T0042383.1 MGP_CBAJ_G0022117.1 mouse_genomes_project 15 112363796 112397698 + MGP_CBAJ_P0042383 Pcbp2 protein_coding protein_coding MGP_CBAJ_T0042384.1 MGP_CBAJ_G0022117.1 mouse_genomes_project 15 112363796 112397698 + MGP_CBAJ_P0042384 Pcbp2 protein_coding protein_coding MGP_CBAJ_T0042385.1 MGP_CBAJ_G0022117.1 mouse_genomes_project 15 112363796 112397698 + MGP_CBAJ_P0042385 Pcbp2 protein_coding protein_coding MGP_CBAJ_T0040705.1 MGP_CBAJ_G0021610.1 mouse_genomes_project 15 70873207 70908171 - MGP_CBAJ_P0040705 Tmem71 protein_coding protein_coding MGP_CBAJ_T0042304.1 MGP_CBAJ_G0022084.1 mouse_genomes_project 15 111266203 111276759 - MGP_CBAJ_P0042304 Krt75 protein_coding protein_coding MGP_CBAJ_T0042051.1 MGP_CBAJ_G0022000.1 mouse_genomes_project 15 107427636 107429937 - MGP_CBAJ_P0042051 Lalba protein_coding protein_coding MGP_CBAJ_T0100152.1 MGP_CBAJ_G0038407.1 mouse_genomes_project 15 30035784 30035918 - Gm23033 snoRNA snoRNA MGP_CBAJ_T0040682.1 MGP_CBAJ_G0021604.1 mouse_genomes_project 15 69242034 69277984 - MGP_CBAJ_P0040682 Gm21961 protein_coding protein_coding MGP_CBAJ_T0012897.1 MGP_CBAJ_G0011009.1 mouse_genomes_project 15 22362801 22364556 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000897.1 MGP_CBAJ_G0000832.1 mouse_genomes_project 15 4227307 4233779 + TEC TEC MGP_CBAJ_T0042287.1 MGP_CBAJ_G0022072.1 mouse_genomes_project 15 110826771 110838349 + MGP_CBAJ_P0042287 Grasp protein_coding protein_coding MGP_CBAJ_T0040505.1 MGP_CBAJ_G0021535.1 mouse_genomes_project 15 44954364 44991306 - MGP_CBAJ_P0040505 Eif3e protein_coding protein_coding MGP_CBAJ_T0009941.1 MGP_CBAJ_G0008079.1 mouse_genomes_project 15 86080633 86080724 - Mir7213 miRNA miRNA MGP_CBAJ_T0098899.1 MGP_CBAJ_G0037154.1 mouse_genomes_project 15 58434474 58434536 - Gm26296 snRNA snRNA MGP_CBAJ_T0041498.1 MGP_CBAJ_G0021825.1 mouse_genomes_project 15 88229082 88235698 - MGP_CBAJ_P0041498 Phf5a protein_coding protein_coding MGP_CBAJ_T0041499.1 MGP_CBAJ_G0021825.1 mouse_genomes_project 15 88229449 88235452 - Phf5a protein_coding processed_transcript MGP_CBAJ_T0040805.1 MGP_CBAJ_G0021635.1 mouse_genomes_project 15 79834699 79841934 - MGP_CBAJ_P0040805 Jrk protein_coding protein_coding MGP_CBAJ_T0041726.1 MGP_CBAJ_G0021904.1 mouse_genomes_project 15 93364375 93393169 - Cerk protein_coding retained_intron MGP_CBAJ_T0041727.1 MGP_CBAJ_G0021904.1 mouse_genomes_project 15 93364376 93429566 - MGP_CBAJ_P0041727 Cerk protein_coding protein_coding MGP_CBAJ_T0041728.1 MGP_CBAJ_G0021904.1 mouse_genomes_project 15 93365571 93383415 - MGP_CBAJ_P0041728 Cerk protein_coding protein_coding MGP_CBAJ_T0006685.1 MGP_CBAJ_G0005510.1 mouse_genomes_project 15 83688939 83694392 + Gm17638 lincRNA lincRNA MGP_CBAJ_T0041234.1 MGP_CBAJ_G0021761.1 mouse_genomes_project 15 84832226 84842706 + MGP_CBAJ_P0041234 Nol12 protein_coding protein_coding MGP_CBAJ_T0041235.1 MGP_CBAJ_G0021761.1 mouse_genomes_project 15 84832244 84838281 + MGP_CBAJ_P0041235 Nol12 protein_coding protein_coding MGP_CBAJ_T0041236.1 MGP_CBAJ_G0021761.1 mouse_genomes_project 15 84832288 84838213 + MGP_CBAJ_P0041236 Nol12 protein_coding protein_coding MGP_CBAJ_T0041237.1 MGP_CBAJ_G0021761.1 mouse_genomes_project 15 84832479 84835179 + MGP_CBAJ_P0041237 Nol12 protein_coding protein_coding MGP_CBAJ_T0041238.1 MGP_CBAJ_G0021761.1 mouse_genomes_project 15 84832501 84833877 + MGP_CBAJ_P0041238 Nol12 protein_coding protein_coding MGP_CBAJ_T0003518.1 MGP_CBAJ_G0003193.1 mouse_genomes_project 15 3451741 3458411 - Gm16311 antisense antisense MGP_CBAJ_T0040320.1 MGP_CBAJ_G0021465.1 mouse_genomes_project 15 26167082 26170404 + March11 protein_coding retained_intron MGP_CBAJ_T0040321.1 MGP_CBAJ_G0021465.1 mouse_genomes_project 15 26167098 26265653 + MGP_CBAJ_P0040321 March11 protein_coding protein_coding MGP_CBAJ_T0040322.1 MGP_CBAJ_G0021465.1 mouse_genomes_project 15 26167098 26265653 + MGP_CBAJ_P0040322 March11 protein_coding protein_coding MGP_CBAJ_T0040323.1 MGP_CBAJ_G0021465.1 mouse_genomes_project 15 26244641 26265653 + March11 protein_coding retained_intron MGP_CBAJ_T0100165.1 MGP_CBAJ_G0038420.1 mouse_genomes_project 15 46172236 46172362 + Gm24903 snoRNA snoRNA MGP_CBAJ_T0042088.1 MGP_CBAJ_G0022015.1 mouse_genomes_project 15 107861773 107880536 - MGP_CBAJ_P0042088 Prkag1 protein_coding protein_coding MGP_CBAJ_T0040760.1 MGP_CBAJ_G0021626.1 mouse_genomes_project 15 78526331 78591770 + MGP_CBAJ_P0040760 Dennd3 protein_coding protein_coding MGP_CBAJ_T0040761.1 MGP_CBAJ_G0021626.1 mouse_genomes_project 15 78526443 78591627 + MGP_CBAJ_P0040761 Dennd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040762.1 MGP_CBAJ_G0021626.1 mouse_genomes_project 15 78532373 78538741 + Dennd3 protein_coding processed_transcript MGP_CBAJ_T0040763.1 MGP_CBAJ_G0021626.1 mouse_genomes_project 15 78537537 78590482 + MGP_CBAJ_P0040763 Dennd3 protein_coding protein_coding MGP_CBAJ_T0040764.1 MGP_CBAJ_G0021626.1 mouse_genomes_project 15 78575041 78587648 + MGP_CBAJ_P0040764 Dennd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040765.1 MGP_CBAJ_G0021626.1 mouse_genomes_project 15 78584371 78586618 + Dennd3 protein_coding retained_intron MGP_CBAJ_T0040766.1 MGP_CBAJ_G0021626.1 mouse_genomes_project 15 78586618 78590427 + Dennd3 protein_coding retained_intron MGP_CBAJ_T0040631.1 MGP_CBAJ_G0021585.1 mouse_genomes_project 15 62318238 62359350 - MGP_CBAJ_P0040631 Tmem65 protein_coding protein_coding MGP_CBAJ_T0041403.1 MGP_CBAJ_G0021804.1 mouse_genomes_project 15 86819130 86849842 + MGP_CBAJ_P0041403 Grap2 protein_coding protein_coding MGP_CBAJ_T0041732.1 MGP_CBAJ_G0021908.1 mouse_genomes_project 15 96251743 96302480 - MGP_CBAJ_P0041732 Brd1 protein_coding protein_coding MGP_CBAJ_T0041733.1 MGP_CBAJ_G0021908.1 mouse_genomes_project 15 96252739 96299051 - MGP_CBAJ_P0041733 Brd1 protein_coding protein_coding MGP_CBAJ_T0041734.1 MGP_CBAJ_G0021908.1 mouse_genomes_project 15 96260484 96265303 - Brd1 protein_coding processed_transcript MGP_CBAJ_T0041735.1 MGP_CBAJ_G0021908.1 mouse_genomes_project 15 96263289 96302477 - MGP_CBAJ_P0041735 Brd1 protein_coding protein_coding MGP_CBAJ_T0041736.1 MGP_CBAJ_G0021908.1 mouse_genomes_project 15 96277314 96283562 - Brd1 protein_coding processed_transcript MGP_CBAJ_T0041737.1 MGP_CBAJ_G0021908.1 mouse_genomes_project 15 96277847 96281447 - Brd1 protein_coding processed_transcript MGP_CBAJ_T0040644.1 MGP_CBAJ_G0021594.1 mouse_genomes_project 15 62985192 63166335 + MGP_CBAJ_P0040644 Nsmce2 protein_coding protein_coding MGP_CBAJ_T0040645.1 MGP_CBAJ_G0021594.1 mouse_genomes_project 15 62985192 63233579 + MGP_CBAJ_P0040645 Nsmce2 protein_coding protein_coding MGP_CBAJ_T0041767.1 MGP_CBAJ_G0021918.1 mouse_genomes_project 15 96700128 96711213 + MGP_CBAJ_P0041767 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041768.1 MGP_CBAJ_G0021918.1 mouse_genomes_project 15 96700128 96716906 + MGP_CBAJ_P0041768 protein_coding protein_coding MGP_CBAJ_T0012943.1 MGP_CBAJ_G0011055.1 mouse_genomes_project 15 113611107 113612535 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0041545.1 MGP_CBAJ_G0021840.1 mouse_genomes_project 15 88667505 88678135 - MGP_CBAJ_P0041545 Cenpm protein_coding protein_coding MGP_CBAJ_T0041546.1 MGP_CBAJ_G0021840.1 mouse_genomes_project 15 88667505 88678135 - MGP_CBAJ_P0041546 Cenpm protein_coding protein_coding MGP_CBAJ_T0006699.1 MGP_CBAJ_G0005520.1 mouse_genomes_project 15 96840038 96846935 - lincRNA lincRNA MGP_CBAJ_T0006655.1 MGP_CBAJ_G0005492.1 mouse_genomes_project 15 37970039 38016116 + Gm26766 lincRNA lincRNA MGP_CBAJ_T0040937.1 MGP_CBAJ_G0021680.1 mouse_genomes_project 15 81477679 81488442 - MGP_CBAJ_P0040937 Puf60 protein_coding protein_coding MGP_CBAJ_T0040938.1 MGP_CBAJ_G0021680.1 mouse_genomes_project 15 81477679 81488442 - MGP_CBAJ_P0040938 Puf60 protein_coding protein_coding MGP_CBAJ_T0012919.1 MGP_CBAJ_G0011031.1 mouse_genomes_project 15 69278235 69278547 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0040303.1 MGP_CBAJ_G0021461.1 mouse_genomes_project 15 25196692 25197345 + MGP_CBAJ_P0040303 Gm5468 protein_coding protein_coding MGP_CBAJ_T0098487.1 MGP_CBAJ_G0036746.1 mouse_genomes_project 15 62316431 62317921 - Gm20712 sense_overlapping sense_overlapping MGP_CBAJ_T0040293.1 MGP_CBAJ_G0021456.1 mouse_genomes_project 15 19796318 19797850 - MGP_CBAJ_P0040293 Acot10 protein_coding protein_coding MGP_CBAJ_T0100173.1 MGP_CBAJ_G0038428.1 mouse_genomes_project 15 64476681 64476813 - Gm23835 snoRNA snoRNA MGP_CBAJ_T0040595.1 MGP_CBAJ_G0021571.1 mouse_genomes_project 15 61101634 61272632 + MGP_CBAJ_P0040595 Zhx2 protein_coding protein_coding MGP_CBAJ_T0040596.1 MGP_CBAJ_G0021571.1 mouse_genomes_project 15 61102701 61252096 + Zhx2 protein_coding processed_transcript MGP_CBAJ_T0042190.1 MGP_CBAJ_G0022048.1 mouse_genomes_project 15 109365627 109564045 + MGP_CBAJ_P0042190 Dip2b protein_coding protein_coding MGP_CBAJ_T0042191.1 MGP_CBAJ_G0022048.1 mouse_genomes_project 15 109497420 109560242 + MGP_CBAJ_P0042191 Dip2b protein_coding protein_coding MGP_CBAJ_T0042192.1 MGP_CBAJ_G0022048.1 mouse_genomes_project 15 109497420 109564045 + MGP_CBAJ_P0042192 Dip2b protein_coding protein_coding MGP_CBAJ_T0042193.1 MGP_CBAJ_G0022048.1 mouse_genomes_project 15 109547770 109550264 + Dip2b protein_coding processed_transcript MGP_CBAJ_T0041605.1 MGP_CBAJ_G0021862.1 mouse_genomes_project 15 89804302 89829876 - MGP_CBAJ_P0041605 Cyb5r3 protein_coding protein_coding MGP_CBAJ_T0041606.1 MGP_CBAJ_G0021862.1 mouse_genomes_project 15 89807699 89827790 - MGP_CBAJ_P0041606 Cyb5r3 protein_coding protein_coding MGP_CBAJ_T0041607.1 MGP_CBAJ_G0021862.1 mouse_genomes_project 15 89811020 89827461 - MGP_CBAJ_P0041607 Cyb5r3 protein_coding protein_coding MGP_CBAJ_T0009983.1 MGP_CBAJ_G0008121.1 mouse_genomes_project 15 113284670 113284767 + Mir148b miRNA miRNA MGP_CBAJ_T0040414.1 MGP_CBAJ_G0021503.1 mouse_genomes_project 15 37027645 37089982 + MGP_CBAJ_P0040414 Spag1 protein_coding unknown_likely_coding MGP_CBAJ_T0098921.1 MGP_CBAJ_G0037176.1 mouse_genomes_project 15 96637531 96637690 + Gm23737 snRNA snRNA MGP_CBAJ_T0040140.1 MGP_CBAJ_G0021413.1 mouse_genomes_project 15 4376533 4444142 + MGP_CBAJ_P0040140 Lifr protein_coding protein_coding MGP_CBAJ_T0040141.1 MGP_CBAJ_G0021413.1 mouse_genomes_project 15 4376546 4437736 + MGP_CBAJ_P0040141 Lifr protein_coding protein_coding MGP_CBAJ_T0040142.1 MGP_CBAJ_G0021413.1 mouse_genomes_project 15 4406924 4449887 + MGP_CBAJ_P0040142 Lifr protein_coding protein_coding MGP_CBAJ_T0041518.1 MGP_CBAJ_G0021830.1 mouse_genomes_project 15 88366307 88366984 + MGP_CBAJ_P0041518 protein_coding protein_coding MGP_CBAJ_T0009940.1 MGP_CBAJ_G0008078.1 mouse_genomes_project 15 85607081 85607207 - Gm27903 miRNA miRNA MGP_CBAJ_T0040627.1 MGP_CBAJ_G0021583.1 mouse_genomes_project 15 61907002 61949942 + MGP_CBAJ_P0040627 Fam91a1 protein_coding protein_coding MGP_CBAJ_T0042289.1 MGP_CBAJ_G0022074.1 mouse_genomes_project 15 110897188 110903822 + MGP_CBAJ_P0042289 Atg101 protein_coding protein_coding MGP_CBAJ_T0009947.1 MGP_CBAJ_G0008085.1 mouse_genomes_project 15 88874164 88874224 - Gm27331 miRNA miRNA MGP_CBAJ_T0003528.1 MGP_CBAJ_G0003201.1 mouse_genomes_project 15 70381388 70398905 + Gm27153 antisense antisense MGP_CBAJ_T0040067.1 MGP_CBAJ_G0021393.1 mouse_genomes_project 15 161458 188524 - MGP_CBAJ_P0040067 Ccdc152 protein_coding protein_coding MGP_CBAJ_T0042177.1 MGP_CBAJ_G0022044.1 mouse_genomes_project 15 108993111 109036040 - MGP_CBAJ_P0042177 Cers5 protein_coding protein_coding MGP_CBAJ_T0042178.1 MGP_CBAJ_G0022044.1 mouse_genomes_project 15 108993541 109036043 - MGP_CBAJ_P0042178 Cers5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042179.1 MGP_CBAJ_G0022044.1 mouse_genomes_project 15 108993848 109036179 - MGP_CBAJ_P0042179 Cers5 protein_coding protein_coding MGP_CBAJ_T0042180.1 MGP_CBAJ_G0022044.1 mouse_genomes_project 15 108995586 109005252 - MGP_CBAJ_P0042180 Cers5 protein_coding protein_coding MGP_CBAJ_T0042181.1 MGP_CBAJ_G0022044.1 mouse_genomes_project 15 108997655 109036463 - MGP_CBAJ_P0042181 Cers5 protein_coding protein_coding MGP_CBAJ_T0042182.1 MGP_CBAJ_G0022044.1 mouse_genomes_project 15 109004223 109035670 - MGP_CBAJ_P0042182 Cers5 protein_coding protein_coding MGP_CBAJ_T0040885.1 MGP_CBAJ_G0021664.1 mouse_genomes_project 15 81135125 81136205 - MGP_CBAJ_P0040885 Mafa protein_coding protein_coding MGP_CBAJ_T0041678.1 MGP_CBAJ_G0021886.1 mouse_genomes_project 15 91889341 91909067 + MGP_CBAJ_P0041678 Nup50 protein_coding protein_coding MGP_CBAJ_T0100148.1 MGP_CBAJ_G0038403.1 mouse_genomes_project 15 19225227 19225357 + Gm25976 snoRNA snoRNA MGP_CBAJ_T0042109.1 MGP_CBAJ_G0022024.1 mouse_genomes_project 15 108212322 108220185 + Dnajc22 protein_coding processed_transcript MGP_CBAJ_T0042110.1 MGP_CBAJ_G0022024.1 mouse_genomes_project 15 108218683 108224006 + MGP_CBAJ_P0042110 Dnajc22 protein_coding protein_coding MGP_CBAJ_T0041818.1 MGP_CBAJ_G0021929.1 mouse_genomes_project 15 97016010 97020666 - MGP_CBAJ_P0041818 Lmf2 protein_coding protein_coding MGP_CBAJ_T0003530.1 MGP_CBAJ_G0003203.1 mouse_genomes_project 15 71119031 71124300 - Gm17140 antisense antisense MGP_CBAJ_T0041710.1 MGP_CBAJ_G0021901.1 mouse_genomes_project 15 93054198 93067455 + MGP_CBAJ_P0041710 Trmu protein_coding nonsense_mediated_decay MGP_CBAJ_T0041711.1 MGP_CBAJ_G0021901.1 mouse_genomes_project 15 93054206 93072215 + MGP_CBAJ_P0041711 Trmu protein_coding protein_coding MGP_CBAJ_T0041712.1 MGP_CBAJ_G0021901.1 mouse_genomes_project 15 93054267 93057733 + MGP_CBAJ_P0041712 Trmu protein_coding nonsense_mediated_decay MGP_CBAJ_T0041713.1 MGP_CBAJ_G0021901.1 mouse_genomes_project 15 93054300 93068811 + Trmu protein_coding retained_intron MGP_CBAJ_T0041714.1 MGP_CBAJ_G0021901.1 mouse_genomes_project 15 93060053 93071249 + MGP_CBAJ_P0041714 Trmu protein_coding nonsense_mediated_decay MGP_CBAJ_T0041715.1 MGP_CBAJ_G0021901.1 mouse_genomes_project 15 93067433 93069328 + Trmu protein_coding retained_intron MGP_CBAJ_T0041716.1 MGP_CBAJ_G0021901.1 mouse_genomes_project 15 93069058 93072215 + Trmu protein_coding processed_transcript MGP_CBAJ_T0041717.1 MGP_CBAJ_G0021901.1 mouse_genomes_project 15 93069602 93071882 + Trmu protein_coding retained_intron MGP_CBAJ_T0041718.1 MGP_CBAJ_G0021901.1 mouse_genomes_project 15 93069732 93072217 + Trmu protein_coding retained_intron MGP_CBAJ_T0009971.1 MGP_CBAJ_G0008109.1 mouse_genomes_project 15 110131051 110131118 - Mir6961 miRNA miRNA MGP_CBAJ_T0041667.1 MGP_CBAJ_G0021883.1 mouse_genomes_project 15 91669787 91710506 + Arhgap8 protein_coding retained_intron MGP_CBAJ_T0041668.1 MGP_CBAJ_G0021883.1 mouse_genomes_project 15 91670027 91723278 + MGP_CBAJ_P0041668 Arhgap8 protein_coding unknown_likely_coding MGP_CBAJ_T0041669.1 MGP_CBAJ_G0021883.1 mouse_genomes_project 15 91695846 91717404 + Arhgap8 protein_coding processed_transcript MGP_CBAJ_T0041670.1 MGP_CBAJ_G0021883.1 mouse_genomes_project 15 91721077 91723141 + Arhgap8 protein_coding retained_intron MGP_CBAJ_T0009962.1 MGP_CBAJ_G0008100.1 mouse_genomes_project 15 95251414 95251508 - Mir6393 miRNA miRNA MGP_CBAJ_T0041926.1 MGP_CBAJ_G0021958.1 mouse_genomes_project 15 101589548 101701588 + MGP_CBAJ_P0041926 Pphln1 protein_coding protein_coding MGP_CBAJ_T0041927.1 MGP_CBAJ_G0021958.1 mouse_genomes_project 15 101589548 101701588 + MGP_CBAJ_P0041927 Pphln1 protein_coding protein_coding MGP_CBAJ_T0041928.1 MGP_CBAJ_G0021958.1 mouse_genomes_project 15 101589548 101701588 + MGP_CBAJ_P0041928 Pphln1 protein_coding protein_coding MGP_CBAJ_T0041929.1 MGP_CBAJ_G0021958.1 mouse_genomes_project 15 101589662 101701173 + MGP_CBAJ_P0041929 Pphln1 protein_coding protein_coding MGP_CBAJ_T0003560.1 MGP_CBAJ_G0003226.1 mouse_genomes_project 15 109094503 109109495 + Gm17057 antisense antisense MGP_CBAJ_T0012941.1 MGP_CBAJ_G0011053.1 mouse_genomes_project 15 109077425 109077710 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098285.1 MGP_CBAJ_G0036554.1 mouse_genomes_project 15 77732274 77736988 - Peg13 sense_intronic sense_intronic MGP_CBAJ_T0041760.1 MGP_CBAJ_G0021917.1 mouse_genomes_project 15 96686176 96696354 + MGP_CBAJ_P0041760 Trabd protein_coding protein_coding MGP_CBAJ_T0041761.1 MGP_CBAJ_G0021917.1 mouse_genomes_project 15 96687065 96698122 + MGP_CBAJ_P0041761 Trabd protein_coding protein_coding MGP_CBAJ_T0041762.1 MGP_CBAJ_G0021917.1 mouse_genomes_project 15 96687124 96698116 + MGP_CBAJ_P0041762 Trabd protein_coding nonsense_mediated_decay MGP_CBAJ_T0041763.1 MGP_CBAJ_G0021917.1 mouse_genomes_project 15 96687146 96697175 + MGP_CBAJ_P0041763 Trabd protein_coding protein_coding MGP_CBAJ_T0041764.1 MGP_CBAJ_G0021917.1 mouse_genomes_project 15 96687176 96697178 + MGP_CBAJ_P0041764 Trabd protein_coding protein_coding MGP_CBAJ_T0041765.1 MGP_CBAJ_G0021917.1 mouse_genomes_project 15 96693573 96698116 + Trabd protein_coding retained_intron MGP_CBAJ_T0041766.1 MGP_CBAJ_G0021917.1 mouse_genomes_project 15 96695753 96696669 + Trabd protein_coding retained_intron MGP_CBAJ_T0040626.1 MGP_CBAJ_G0021582.1 mouse_genomes_project 15 61816275 61849543 - MGP_CBAJ_P0040626 Anxa13 protein_coding protein_coding MGP_CBAJ_T0006654.1 MGP_CBAJ_G0005491.1 mouse_genomes_project 15 32624818 32628920 - Snhg18 lincRNA lincRNA MGP_CBAJ_T0006698.1 MGP_CBAJ_G0005519.1 mouse_genomes_project 15 92760869 92766994 + D130051D11Rik lincRNA lincRNA MGP_CBAJ_T0009975.1 MGP_CBAJ_G0008113.1 mouse_genomes_project 15 111273041 111273170 + Gm44460 miRNA miRNA MGP_CBAJ_T0006710.1 MGP_CBAJ_G0005526.1 mouse_genomes_project 15 107848614 107865002 + lincRNA lincRNA MGP_CBAJ_T0040437.1 MGP_CBAJ_G0021511.1 mouse_genomes_project 15 38239913 38394850 + MGP_CBAJ_P0040437 Grhl2 protein_coding protein_coding MGP_CBAJ_T0040438.1 MGP_CBAJ_G0021511.1 mouse_genomes_project 15 38239913 38358471 + MGP_CBAJ_P0040438 Grhl2 protein_coding protein_coding MGP_CBAJ_T0040439.1 MGP_CBAJ_G0021511.1 mouse_genomes_project 15 38239935 38301882 + MGP_CBAJ_P0040439 Grhl2 protein_coding protein_coding MGP_CBAJ_T0040440.1 MGP_CBAJ_G0021511.1 mouse_genomes_project 15 38341456 38394843 + Grhl2 protein_coding processed_transcript MGP_CBAJ_T0040441.1 MGP_CBAJ_G0021511.1 mouse_genomes_project 15 38360560 38392221 + MGP_CBAJ_P0040441 Grhl2 protein_coding protein_coding MGP_CBAJ_T0017215.1 MGP_CBAJ_G0015046.1 mouse_genomes_project 15 85775168 85777393 + Gm16575 processed_transcript processed_transcript MGP_CBAJ_T0041705.1 MGP_CBAJ_G0021898.1 mouse_genomes_project 15 92969293 92976357 - MGP_CBAJ_P0041705 Pkdrej protein_coding protein_coding MGP_CBAJ_T0101656.1 MGP_CBAJ_G0039687.1 mouse_genomes_project 15 80512412 80515570 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0003516.1 MGP_CBAJ_G0003191.1 mouse_genomes_project 15 1007256 1009828 - Gm15632 antisense antisense MGP_CBAJ_T0040829.1 MGP_CBAJ_G0021650.1 mouse_genomes_project 15 80122420 80128837 + MGP_CBAJ_P0040829 Ly6e protein_coding protein_coding MGP_CBAJ_T0040830.1 MGP_CBAJ_G0021650.1 mouse_genomes_project 15 80122420 80128835 + MGP_CBAJ_P0040830 Ly6e protein_coding protein_coding MGP_CBAJ_T0040831.1 MGP_CBAJ_G0021650.1 mouse_genomes_project 15 80122440 80128837 + MGP_CBAJ_P0040831 Ly6e protein_coding protein_coding MGP_CBAJ_T0040832.1 MGP_CBAJ_G0021650.1 mouse_genomes_project 15 80122474 80127708 + MGP_CBAJ_P0040832 Ly6e protein_coding protein_coding MGP_CBAJ_T0040833.1 MGP_CBAJ_G0021650.1 mouse_genomes_project 15 80122510 80127321 + MGP_CBAJ_P0040833 Ly6e protein_coding protein_coding MGP_CBAJ_T0040834.1 MGP_CBAJ_G0021650.1 mouse_genomes_project 15 80122532 80127688 + MGP_CBAJ_P0040834 Ly6e protein_coding protein_coding MGP_CBAJ_T0040835.1 MGP_CBAJ_G0021650.1 mouse_genomes_project 15 80122546 80127587 + MGP_CBAJ_P0040835 Ly6e protein_coding protein_coding MGP_CBAJ_T0040836.1 MGP_CBAJ_G0021650.1 mouse_genomes_project 15 80122554 80127659 + MGP_CBAJ_P0040836 Ly6e protein_coding protein_coding MGP_CBAJ_T0040837.1 MGP_CBAJ_G0021650.1 mouse_genomes_project 15 80122609 80127525 + MGP_CBAJ_P0040837 Ly6e protein_coding protein_coding MGP_CBAJ_T0040838.1 MGP_CBAJ_G0021650.1 mouse_genomes_project 15 80122628 80127592 + MGP_CBAJ_P0040838 Ly6e protein_coding protein_coding MGP_CBAJ_T0040839.1 MGP_CBAJ_G0021650.1 mouse_genomes_project 15 80123021 80128263 + MGP_CBAJ_P0040839 Ly6e protein_coding protein_coding MGP_CBAJ_T0040840.1 MGP_CBAJ_G0021650.1 mouse_genomes_project 15 80123034 80127961 + Ly6e protein_coding retained_intron MGP_CBAJ_T0040841.1 MGP_CBAJ_G0021650.1 mouse_genomes_project 15 80123036 80128263 + Ly6e protein_coding retained_intron MGP_CBAJ_T0040842.1 MGP_CBAJ_G0021650.1 mouse_genomes_project 15 80123040 80127542 + MGP_CBAJ_P0040842 Ly6e protein_coding protein_coding MGP_CBAJ_T0040843.1 MGP_CBAJ_G0021650.1 mouse_genomes_project 15 80123051 80123866 + Ly6e protein_coding retained_intron MGP_CBAJ_T0040844.1 MGP_CBAJ_G0021650.1 mouse_genomes_project 15 80123928 80127758 + MGP_CBAJ_P0040844 Ly6e protein_coding protein_coding MGP_CBAJ_T0098904.1 MGP_CBAJ_G0037159.1 mouse_genomes_project 15 68172568 68172673 + Gm25628 snRNA snRNA MGP_CBAJ_T0040649.1 MGP_CBAJ_G0021597.1 mouse_genomes_project 15 64601194 64607279 - MGP_CBAJ_P0040649 Fam84b protein_coding protein_coding MGP_CBAJ_T0040650.1 MGP_CBAJ_G0021597.1 mouse_genomes_project 15 64607230 64642814 - Fam84b protein_coding processed_transcript MGP_CBAJ_T0009981.1 MGP_CBAJ_G0008119.1 mouse_genomes_project 15 112937399 112937484 + Mir196a-2 miRNA miRNA MGP_CBAJ_T0101662.1 MGP_CBAJ_G0039693.1 mouse_genomes_project 15 80615012 80618424 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0041360.1 MGP_CBAJ_G0021792.1 mouse_genomes_project 15 85948854 85972183 + MGP_CBAJ_P0041360 Apobec3 protein_coding protein_coding MGP_CBAJ_T0041361.1 MGP_CBAJ_G0021792.1 mouse_genomes_project 15 85948889 85972236 + MGP_CBAJ_P0041361 Apobec3 protein_coding protein_coding MGP_CBAJ_T0041362.1 MGP_CBAJ_G0021792.1 mouse_genomes_project 15 85949244 85958123 + Apobec3 protein_coding processed_transcript MGP_CBAJ_T0041363.1 MGP_CBAJ_G0021792.1 mouse_genomes_project 15 85949601 85975070 + MGP_CBAJ_P0041363 Apobec3 protein_coding protein_coding MGP_CBAJ_T0041364.1 MGP_CBAJ_G0021792.1 mouse_genomes_project 15 85949604 85972128 + MGP_CBAJ_P0041364 Apobec3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041365.1 MGP_CBAJ_G0021792.1 mouse_genomes_project 15 85949635 85974009 + MGP_CBAJ_P0041365 Apobec3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041366.1 MGP_CBAJ_G0021792.1 mouse_genomes_project 15 85949641 85974729 + MGP_CBAJ_P0041366 Apobec3 protein_coding protein_coding MGP_CBAJ_T0041367.1 MGP_CBAJ_G0021792.1 mouse_genomes_project 15 85949642 85975077 + MGP_CBAJ_P0041367 Apobec3 protein_coding protein_coding MGP_CBAJ_T0041368.1 MGP_CBAJ_G0021792.1 mouse_genomes_project 15 85949648 85982235 + MGP_CBAJ_P0041368 Apobec3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041369.1 MGP_CBAJ_G0021792.1 mouse_genomes_project 15 85949677 85974009 + MGP_CBAJ_P0041369 Apobec3 protein_coding protein_coding MGP_CBAJ_T0041370.1 MGP_CBAJ_G0021792.1 mouse_genomes_project 15 85952249 85958544 + MGP_CBAJ_P0041370 Apobec3 protein_coding protein_coding MGP_CBAJ_T0041371.1 MGP_CBAJ_G0021792.1 mouse_genomes_project 15 85958181 85972546 + Apobec3 protein_coding retained_intron MGP_CBAJ_T0041372.1 MGP_CBAJ_G0021792.1 mouse_genomes_project 15 85961182 85974564 + Apobec3 protein_coding retained_intron MGP_CBAJ_T0041373.1 MGP_CBAJ_G0021792.1 mouse_genomes_project 15 85972750 85973717 + Apobec3 protein_coding retained_intron MGP_CBAJ_T0100156.1 MGP_CBAJ_G0038411.1 mouse_genomes_project 15 31476868 31477002 - Gm26416 snoRNA snoRNA MGP_CBAJ_T0040724.1 MGP_CBAJ_G0021615.1 mouse_genomes_project 15 71315502 71358097 - MGP_CBAJ_P0040724 Ndrg1 protein_coding protein_coding MGP_CBAJ_T0040725.1 MGP_CBAJ_G0021615.1 mouse_genomes_project 15 71317047 71320651 - Ndrg1 protein_coding retained_intron MGP_CBAJ_T0040726.1 MGP_CBAJ_G0021615.1 mouse_genomes_project 15 71317258 71358096 - MGP_CBAJ_P0040726 Ndrg1 protein_coding protein_coding MGP_CBAJ_T0040727.1 MGP_CBAJ_G0021615.1 mouse_genomes_project 15 71320339 71358096 - Ndrg1 protein_coding retained_intron MGP_CBAJ_T0040728.1 MGP_CBAJ_G0021615.1 mouse_genomes_project 15 71328193 71358096 - MGP_CBAJ_P0040728 Ndrg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040729.1 MGP_CBAJ_G0021615.1 mouse_genomes_project 15 71329255 71358096 - MGP_CBAJ_P0040729 Ndrg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040730.1 MGP_CBAJ_G0021615.1 mouse_genomes_project 15 71329260 71334660 - MGP_CBAJ_P0040730 Ndrg1 protein_coding protein_coding MGP_CBAJ_T0040731.1 MGP_CBAJ_G0021615.1 mouse_genomes_project 15 71329260 71356381 - MGP_CBAJ_P0040731 Ndrg1 protein_coding protein_coding MGP_CBAJ_T0040732.1 MGP_CBAJ_G0021615.1 mouse_genomes_project 15 71329273 71358073 - MGP_CBAJ_P0040732 Ndrg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040733.1 MGP_CBAJ_G0021615.1 mouse_genomes_project 15 71329278 71358052 - MGP_CBAJ_P0040733 Ndrg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040734.1 MGP_CBAJ_G0021615.1 mouse_genomes_project 15 71329310 71358073 - MGP_CBAJ_P0040734 Ndrg1 protein_coding protein_coding MGP_CBAJ_T0040735.1 MGP_CBAJ_G0021615.1 mouse_genomes_project 15 71329317 71356396 - MGP_CBAJ_P0040735 Ndrg1 protein_coding protein_coding MGP_CBAJ_T0040736.1 MGP_CBAJ_G0021615.1 mouse_genomes_project 15 71332716 71358097 - MGP_CBAJ_P0040736 Ndrg1 protein_coding protein_coding MGP_CBAJ_T0042288.1 MGP_CBAJ_G0022073.1 mouse_genomes_project 15 110876571 110884436 + MGP_CBAJ_P0042288 Nr4a1 protein_coding protein_coding MGP_CBAJ_T0040890.1 MGP_CBAJ_G0021668.1 mouse_genomes_project 15 81291534 81295052 - MGP_CBAJ_P0040890 Naprt protein_coding protein_coding MGP_CBAJ_T0003561.1 MGP_CBAJ_G0003227.1 mouse_genomes_project 15 109226812 109252419 + Gm21917 antisense antisense MGP_CBAJ_T0003562.1 MGP_CBAJ_G0003227.1 mouse_genomes_project 15 109226812 109228798 + Gm21917 antisense antisense MGP_CBAJ_T0003563.1 MGP_CBAJ_G0003227.1 mouse_genomes_project 15 109229904 109252824 + Gm21917 antisense antisense MGP_CBAJ_T0042151.1 MGP_CBAJ_G0022036.1 mouse_genomes_project 15 108797706 108801465 + MGP_CBAJ_P0042151 Aqp5 protein_coding protein_coding MGP_CBAJ_T0042152.1 MGP_CBAJ_G0022036.1 mouse_genomes_project 15 108797885 108801686 + MGP_CBAJ_P0042152 Aqp5 protein_coding protein_coding MGP_CBAJ_T0040758.1 MGP_CBAJ_G0021625.1 mouse_genomes_project 15 78170937 78414514 - MGP_CBAJ_P0040758 Ptk2 protein_coding protein_coding MGP_CBAJ_T0040759.1 MGP_CBAJ_G0021625.1 mouse_genomes_project 15 78184921 78348063 - MGP_CBAJ_P0040759 Ptk2 protein_coding protein_coding MGP_CBAJ_T0098889.1 MGP_CBAJ_G0037144.1 mouse_genomes_project 15 37055347 37055410 + Gm23754 snRNA snRNA MGP_CBAJ_T0041442.1 MGP_CBAJ_G0021811.1 mouse_genomes_project 15 87497897 87501345 + MGP_CBAJ_P0041442 Mchr1 protein_coding protein_coding MGP_CBAJ_T0012889.1 MGP_CBAJ_G0011001.1 mouse_genomes_project 15 5924513 5924813 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0041654.1 MGP_CBAJ_G0021879.1 mouse_genomes_project 15 91209955 91213033 + Parvg protein_coding processed_transcript MGP_CBAJ_T0041655.1 MGP_CBAJ_G0021879.1 mouse_genomes_project 15 91210649 91232410 + MGP_CBAJ_P0041655 Parvg protein_coding protein_coding MGP_CBAJ_T0041656.1 MGP_CBAJ_G0021879.1 mouse_genomes_project 15 91210663 91214873 + MGP_CBAJ_P0041656 Parvg protein_coding nonsense_mediated_decay MGP_CBAJ_T0041657.1 MGP_CBAJ_G0021879.1 mouse_genomes_project 15 91210691 91214859 + MGP_CBAJ_P0041657 Parvg protein_coding nonsense_mediated_decay MGP_CBAJ_T0041658.1 MGP_CBAJ_G0021879.1 mouse_genomes_project 15 91210724 91216078 + Parvg protein_coding processed_transcript MGP_CBAJ_T0041659.1 MGP_CBAJ_G0021879.1 mouse_genomes_project 15 91212101 91214909 + MGP_CBAJ_P0041659 Parvg protein_coding protein_coding MGP_CBAJ_T0041660.1 MGP_CBAJ_G0021879.1 mouse_genomes_project 15 91212101 91232446 + MGP_CBAJ_P0041660 Parvg protein_coding protein_coding MGP_CBAJ_T0097963.1 MGP_CBAJ_G0036236.1 mouse_genomes_project 15 85731019 85731143 + n-R5s40 rRNA rRNA MGP_CBAJ_T0041620.1 MGP_CBAJ_G0021869.1 mouse_genomes_project 15 90289881 90303257 + MGP_CBAJ_P0041620 Tspo protein_coding protein_coding MGP_CBAJ_T0100150.1 MGP_CBAJ_G0038405.1 mouse_genomes_project 15 22621558 22621690 + Gm24656 snoRNA snoRNA MGP_CBAJ_T0041180.1 MGP_CBAJ_G0021739.1 mouse_genomes_project 15 83721053 83866027 - MGP_CBAJ_P0041180 Cacng2 protein_coding protein_coding MGP_CBAJ_T0006684.1 MGP_CBAJ_G0005509.1 mouse_genomes_project 15 82631073 82642939 + 1700109K24Rik lincRNA lincRNA MGP_CBAJ_T0041621.1 MGP_CBAJ_G0021870.1 mouse_genomes_project 15 90304174 90328055 - MGP_CBAJ_P0041621 Ttll12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041622.1 MGP_CBAJ_G0021870.1 mouse_genomes_project 15 90304699 90328055 - MGP_CBAJ_P0041622 Ttll12 protein_coding protein_coding MGP_CBAJ_T0041623.1 MGP_CBAJ_G0021870.1 mouse_genomes_project 15 90310873 90315999 - Ttll12 protein_coding retained_intron MGP_CBAJ_T0100185.1 MGP_CBAJ_G0038440.1 mouse_genomes_project 15 106906598 106906727 + Gm25668 snoRNA snoRNA MGP_CBAJ_T0040589.1 MGP_CBAJ_G0021568.1 mouse_genomes_project 15 58839997 59138756 - MGP_CBAJ_P0040589 Sntb1 protein_coding protein_coding MGP_CBAJ_T0040590.1 MGP_CBAJ_G0021568.1 mouse_genomes_project 15 59002712 59138529 - MGP_CBAJ_P0040590 Sntb1 protein_coding protein_coding MGP_CBAJ_T0040591.1 MGP_CBAJ_G0021568.1 mouse_genomes_project 15 59003686 59138117 - Sntb1 protein_coding processed_transcript MGP_CBAJ_T0040122.1 MGP_CBAJ_G0021409.1 mouse_genomes_project 15 3625338 3688095 + MGP_CBAJ_P0040122 C9 protein_coding protein_coding MGP_CBAJ_T0040123.1 MGP_CBAJ_G0021409.1 mouse_genomes_project 15 3625383 3650065 + MGP_CBAJ_P0040123 C9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040124.1 MGP_CBAJ_G0021409.1 mouse_genomes_project 15 3678628 3680571 + C9 protein_coding retained_intron MGP_CBAJ_T0040125.1 MGP_CBAJ_G0021409.1 mouse_genomes_project 15 3679066 3688088 + MGP_CBAJ_P0040125 C9 protein_coding protein_coding MGP_CBAJ_T0041334.1 MGP_CBAJ_G0021785.1 mouse_genomes_project 15 85705048 85726403 - MGP_CBAJ_P0041334 Josd1 protein_coding protein_coding MGP_CBAJ_T0041179.1 MGP_CBAJ_G0021738.1 mouse_genomes_project 15 83686263 83698090 - MGP_CBAJ_P0041179 Eif3d protein_coding protein_coding MGP_CBAJ_T0100171.1 MGP_CBAJ_G0038426.1 mouse_genomes_project 15 61492063 61492199 - Gm22299 snoRNA snoRNA MGP_CBAJ_T0041638.1 MGP_CBAJ_G0021873.1 mouse_genomes_project 15 90656732 90878581 - MGP_CBAJ_P0041638 Efcab6 protein_coding unknown_likely_coding MGP_CBAJ_T0041639.1 MGP_CBAJ_G0021873.1 mouse_genomes_project 15 90656738 90878502 - MGP_CBAJ_P0041639 Efcab6 protein_coding protein_coding MGP_CBAJ_T0041640.1 MGP_CBAJ_G0021873.1 mouse_genomes_project 15 90656740 90711727 - Efcab6 protein_coding processed_transcript MGP_CBAJ_T0041641.1 MGP_CBAJ_G0021873.1 mouse_genomes_project 15 90656793 90729499 - Efcab6 protein_coding retained_intron MGP_CBAJ_T0041642.1 MGP_CBAJ_G0021873.1 mouse_genomes_project 15 90662398 90673642 - Efcab6 protein_coding processed_transcript MGP_CBAJ_T0041643.1 MGP_CBAJ_G0021873.1 mouse_genomes_project 15 90718986 90740045 - MGP_CBAJ_P0041643 Efcab6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041644.1 MGP_CBAJ_G0021873.1 mouse_genomes_project 15 90760609 90763254 - Efcab6 protein_coding processed_transcript MGP_CBAJ_T0041645.1 MGP_CBAJ_G0021873.1 mouse_genomes_project 15 90767894 90784443 - Efcab6 protein_coding processed_transcript MGP_CBAJ_T0041646.1 MGP_CBAJ_G0021873.1 mouse_genomes_project 15 90826479 90878532 - Efcab6 protein_coding processed_transcript MGP_CBAJ_T0000903.1 MGP_CBAJ_G0000838.1 mouse_genomes_project 15 24980511 24981021 - TEC TEC MGP_CBAJ_T0041684.1 MGP_CBAJ_G0021890.1 mouse_genomes_project 15 92049666 92131608 - MGP_CBAJ_P0041684 Smc1b protein_coding protein_coding MGP_CBAJ_T0041895.1 MGP_CBAJ_G0021951.1 mouse_genomes_project 15 99622644 99794961 + MGP_CBAJ_P0041895 Lrrk2 protein_coding protein_coding MGP_CBAJ_T0041896.1 MGP_CBAJ_G0021951.1 mouse_genomes_project 15 99622750 99794872 + MGP_CBAJ_P0041896 Lrrk2 protein_coding unknown_likely_coding MGP_CBAJ_T0041897.1 MGP_CBAJ_G0021951.1 mouse_genomes_project 15 99706664 99763547 + Lrrk2 protein_coding processed_transcript MGP_CBAJ_T0041898.1 MGP_CBAJ_G0021951.1 mouse_genomes_project 15 99740054 99746200 + Lrrk2 protein_coding processed_transcript MGP_CBAJ_T0041899.1 MGP_CBAJ_G0021951.1 mouse_genomes_project 15 99748086 99794867 + Lrrk2 protein_coding processed_transcript MGP_CBAJ_T0041900.1 MGP_CBAJ_G0021951.1 mouse_genomes_project 15 99787147 99794867 + Lrrk2 protein_coding retained_intron MGP_CBAJ_T0041901.1 MGP_CBAJ_G0021951.1 mouse_genomes_project 15 99793525 99794960 + Lrrk2 protein_coding retained_intron MGP_CBAJ_T0098917.1 MGP_CBAJ_G0037172.1 mouse_genomes_project 15 89799157 89799308 + Rnu12 snRNA snRNA MGP_CBAJ_T0042007.1 MGP_CBAJ_G0021984.1 mouse_genomes_project 15 106790552 106796428 + MGP_CBAJ_P0042007 Tmem106c protein_coding unknown_likely_coding MGP_CBAJ_T0042034.1 MGP_CBAJ_G0021991.1 mouse_genomes_project 15 107062790 107079828 - MGP_CBAJ_P0042034 Olfr287 protein_coding protein_coding MGP_CBAJ_T0042081.1 MGP_CBAJ_G0022011.1 mouse_genomes_project 15 107752284 107785990 - MGP_CBAJ_P0042081 Arf3 protein_coding protein_coding MGP_CBAJ_T0042082.1 MGP_CBAJ_G0022011.1 mouse_genomes_project 15 107755640 107785993 - Arf3 protein_coding processed_transcript MGP_CBAJ_T0042083.1 MGP_CBAJ_G0022011.1 mouse_genomes_project 15 107757176 107785771 - MGP_CBAJ_P0042083 Arf3 protein_coding protein_coding MGP_CBAJ_T0009970.1 MGP_CBAJ_G0008108.1 mouse_genomes_project 15 108192786 108192847 + Mir6960 miRNA miRNA MGP_CBAJ_T0041739.1 MGP_CBAJ_G0021910.1 mouse_genomes_project 15 96389753 96400635 - Alg12 protein_coding retained_intron MGP_CBAJ_T0041740.1 MGP_CBAJ_G0021910.1 mouse_genomes_project 15 96389753 96403782 - MGP_CBAJ_P0041740 Alg12 protein_coding protein_coding MGP_CBAJ_T0041741.1 MGP_CBAJ_G0021910.1 mouse_genomes_project 15 96389754 96403749 - MGP_CBAJ_P0041741 Alg12 protein_coding protein_coding MGP_CBAJ_T0041742.1 MGP_CBAJ_G0021910.1 mouse_genomes_project 15 96399071 96403556 - MGP_CBAJ_P0041742 Alg12 protein_coding protein_coding MGP_CBAJ_T0040464.1 MGP_CBAJ_G0021516.1 mouse_genomes_project 15 39369459 39376979 + MGP_CBAJ_P0040464 Odf1 protein_coding protein_coding MGP_CBAJ_T0098892.1 MGP_CBAJ_G0037147.1 mouse_genomes_project 15 46799277 46799370 + Gm24768 snRNA snRNA MGP_CBAJ_T0003527.1 MGP_CBAJ_G0003200.1 mouse_genomes_project 15 61143535 61145639 - 9330154K18Rik antisense antisense MGP_CBAJ_T0101270.1 MGP_CBAJ_G0039399.1 mouse_genomes_project 15 80543294 80546955 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101271.1 MGP_CBAJ_G0039399.1 mouse_genomes_project 15 80543499 80546654 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0041951.1 MGP_CBAJ_G0021966.1 mouse_genomes_project 15 104097808 104133643 - MGP_CBAJ_P0041951 Dbx2 protein_coding protein_coding MGP_CBAJ_T0101655.1 MGP_CBAJ_G0039686.1 mouse_genomes_project 15 80457956 80461698 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0012921.1 MGP_CBAJ_G0011033.1 mouse_genomes_project 15 79851019 79851163 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0040634.1 MGP_CBAJ_G0021588.1 mouse_genomes_project 15 62436164 62457029 + MGP_CBAJ_P0040634 Rnf139 protein_coding protein_coding MGP_CBAJ_T0042070.1 MGP_CBAJ_G0022007.1 mouse_genomes_project 15 107645467 107662988 - MGP_CBAJ_P0042070 Ddx23 protein_coding protein_coding MGP_CBAJ_T0042071.1 MGP_CBAJ_G0022007.1 mouse_genomes_project 15 107648316 107662983 - Ddx23 protein_coding retained_intron MGP_CBAJ_T0042072.1 MGP_CBAJ_G0022007.1 mouse_genomes_project 15 107648328 107662980 - Ddx23 protein_coding retained_intron MGP_CBAJ_T0042073.1 MGP_CBAJ_G0022007.1 mouse_genomes_project 15 107652355 107662983 - Ddx23 protein_coding retained_intron MGP_CBAJ_T0042074.1 MGP_CBAJ_G0022007.1 mouse_genomes_project 15 107656815 107662957 - MGP_CBAJ_P0042074 Ddx23 protein_coding protein_coding MGP_CBAJ_T0042075.1 MGP_CBAJ_G0022007.1 mouse_genomes_project 15 107658029 107662988 - Ddx23 protein_coding retained_intron MGP_CBAJ_T0041289.1 MGP_CBAJ_G0021773.1 mouse_genomes_project 15 85194937 85239426 - MGP_CBAJ_P0041289 Baiap2l2 protein_coding protein_coding MGP_CBAJ_T0041290.1 MGP_CBAJ_G0021773.1 mouse_genomes_project 15 85194938 85239331 - MGP_CBAJ_P0041290 Baiap2l2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041291.1 MGP_CBAJ_G0021773.1 mouse_genomes_project 15 85195074 85201219 - Baiap2l2 protein_coding processed_transcript MGP_CBAJ_T0041292.1 MGP_CBAJ_G0021773.1 mouse_genomes_project 15 85201583 85203165 - Baiap2l2 protein_coding processed_transcript MGP_CBAJ_T0041293.1 MGP_CBAJ_G0021773.1 mouse_genomes_project 15 85212055 85239382 - MGP_CBAJ_P0041293 Baiap2l2 protein_coding protein_coding MGP_CBAJ_T0040096.1 MGP_CBAJ_G0021401.1 mouse_genomes_project 15 1997620 2080784 - MGP_CBAJ_P0040096 C7 protein_coding protein_coding MGP_CBAJ_T0040567.1 MGP_CBAJ_G0021563.1 mouse_genomes_project 15 58256279 58269694 - MGP_CBAJ_P0040567 Gm9920 protein_coding protein_coding MGP_CBAJ_T0040568.1 MGP_CBAJ_G0021563.1 mouse_genomes_project 15 58256427 58269572 - MGP_CBAJ_P0040568 Gm9920 protein_coding protein_coding MGP_CBAJ_T0040569.1 MGP_CBAJ_G0021563.1 mouse_genomes_project 15 58266387 58269789 - Gm9920 protein_coding processed_transcript MGP_CBAJ_T0040570.1 MGP_CBAJ_G0021563.1 mouse_genomes_project 15 58267974 58269572 - Gm9920 protein_coding retained_intron MGP_CBAJ_T0042286.1 MGP_CBAJ_G0022071.1 mouse_genomes_project 15 110771112 110816249 + MGP_CBAJ_P0042286 protein_coding protein_coding MGP_CBAJ_T0009976.1 MGP_CBAJ_G0008114.1 mouse_genomes_project 15 111336620 111362927 + miRNA miRNA MGP_CBAJ_T0041511.1 MGP_CBAJ_G0021829.1 mouse_genomes_project 15 88325058 88337727 - MGP_CBAJ_P0041511 Pmm1 protein_coding protein_coding MGP_CBAJ_T0041512.1 MGP_CBAJ_G0021829.1 mouse_genomes_project 15 88325058 88337666 - MGP_CBAJ_P0041512 Pmm1 protein_coding protein_coding MGP_CBAJ_T0041513.1 MGP_CBAJ_G0021829.1 mouse_genomes_project 15 88325352 88328894 - Pmm1 protein_coding retained_intron MGP_CBAJ_T0041514.1 MGP_CBAJ_G0021829.1 mouse_genomes_project 15 88325394 88337639 - MGP_CBAJ_P0041514 Pmm1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041515.1 MGP_CBAJ_G0021829.1 mouse_genomes_project 15 88325497 88326219 - Pmm1 protein_coding retained_intron MGP_CBAJ_T0041516.1 MGP_CBAJ_G0021829.1 mouse_genomes_project 15 88332342 88337630 - Pmm1 protein_coding retained_intron MGP_CBAJ_T0041517.1 MGP_CBAJ_G0021829.1 mouse_genomes_project 15 88334131 88337561 - Pmm1 protein_coding retained_intron MGP_CBAJ_T0012935.1 MGP_CBAJ_G0011047.1 mouse_genomes_project 15 98382618 98383101 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0041212.1 MGP_CBAJ_G0021750.1 mouse_genomes_project 15 84363732 84371065 - MGP_CBAJ_P0041212 Sstr3 protein_coding protein_coding MGP_CBAJ_T0017182.1 MGP_CBAJ_G0015031.1 mouse_genomes_project 15 955501 959880 - BC037032 processed_transcript TEC MGP_CBAJ_T0017183.1 MGP_CBAJ_G0015031.1 mouse_genomes_project 15 957073 962781 - BC037032 processed_transcript antisense MGP_CBAJ_T0017184.1 MGP_CBAJ_G0015031.1 mouse_genomes_project 15 957758 962790 - BC037032 processed_transcript antisense MGP_CBAJ_T0017185.1 MGP_CBAJ_G0015031.1 mouse_genomes_project 15 958362 962793 - BC037032 processed_transcript antisense MGP_CBAJ_T0017186.1 MGP_CBAJ_G0015031.1 mouse_genomes_project 15 958958 961464 - BC037032 processed_transcript antisense MGP_CBAJ_T0017187.1 MGP_CBAJ_G0015031.1 mouse_genomes_project 15 961784 962540 - BC037032 processed_transcript antisense MGP_CBAJ_T0042305.1 MGP_CBAJ_G0022085.1 mouse_genomes_project 15 111446541 111452861 - MGP_CBAJ_P0042305 Krt5 protein_coding protein_coding MGP_CBAJ_T0041971.1 MGP_CBAJ_G0021978.1 mouse_genomes_project 15 106473087 106506991 - MGP_CBAJ_P0041971 Rpap3 protein_coding protein_coding MGP_CBAJ_T0041969.1 MGP_CBAJ_G0021976.1 mouse_genomes_project 15 105973054 105976269 - MGP_CBAJ_P0041969 Amigo2 protein_coding protein_coding MGP_CBAJ_T0040662.1 MGP_CBAJ_G0021602.1 mouse_genomes_project 15 68249340 68491253 - MGP_CBAJ_P0040662 Asap1 protein_coding protein_coding MGP_CBAJ_T0040663.1 MGP_CBAJ_G0021602.1 mouse_genomes_project 15 68251020 68491219 - MGP_CBAJ_P0040663 Asap1 protein_coding protein_coding MGP_CBAJ_T0040664.1 MGP_CBAJ_G0021602.1 mouse_genomes_project 15 68251023 68571018 - MGP_CBAJ_P0040664 Asap1 protein_coding protein_coding MGP_CBAJ_T0040665.1 MGP_CBAJ_G0021602.1 mouse_genomes_project 15 68251025 68570855 - MGP_CBAJ_P0040665 Asap1 protein_coding protein_coding MGP_CBAJ_T0040666.1 MGP_CBAJ_G0021602.1 mouse_genomes_project 15 68251025 68571018 - MGP_CBAJ_P0040666 Asap1 protein_coding protein_coding MGP_CBAJ_T0040667.1 MGP_CBAJ_G0021602.1 mouse_genomes_project 15 68251025 68533486 - MGP_CBAJ_P0040667 Asap1 protein_coding protein_coding MGP_CBAJ_T0040668.1 MGP_CBAJ_G0021602.1 mouse_genomes_project 15 68251025 68571018 - MGP_CBAJ_P0040668 Asap1 protein_coding protein_coding MGP_CBAJ_T0040669.1 MGP_CBAJ_G0021602.1 mouse_genomes_project 15 68251025 68571018 - MGP_CBAJ_P0040669 Asap1 protein_coding protein_coding MGP_CBAJ_T0040670.1 MGP_CBAJ_G0021602.1 mouse_genomes_project 15 68251103 68570836 - MGP_CBAJ_P0040670 Asap1 protein_coding protein_coding MGP_CBAJ_T0040671.1 MGP_CBAJ_G0021602.1 mouse_genomes_project 15 68251931 68533486 - MGP_CBAJ_P0040671 Asap1 protein_coding protein_coding MGP_CBAJ_T0040672.1 MGP_CBAJ_G0021602.1 mouse_genomes_project 15 68251931 68533486 - MGP_CBAJ_P0040672 Asap1 protein_coding protein_coding MGP_CBAJ_T0040673.1 MGP_CBAJ_G0021602.1 mouse_genomes_project 15 68257360 68268666 - Asap1 protein_coding retained_intron MGP_CBAJ_T0040674.1 MGP_CBAJ_G0021602.1 mouse_genomes_project 15 68286134 68288867 - Asap1 protein_coding processed_transcript MGP_CBAJ_T0040675.1 MGP_CBAJ_G0021602.1 mouse_genomes_project 15 68286187 68289903 - Asap1 protein_coding retained_intron MGP_CBAJ_T0040676.1 MGP_CBAJ_G0021602.1 mouse_genomes_project 15 68325414 68376899 - MGP_CBAJ_P0040676 Asap1 protein_coding protein_coding MGP_CBAJ_T0040677.1 MGP_CBAJ_G0021602.1 mouse_genomes_project 15 68341572 68570831 - Asap1 protein_coding processed_transcript MGP_CBAJ_T0040678.1 MGP_CBAJ_G0021602.1 mouse_genomes_project 15 68359377 68491253 - Asap1 protein_coding retained_intron MGP_CBAJ_T0040679.1 MGP_CBAJ_G0021602.1 mouse_genomes_project 15 68359871 68490269 - Asap1 protein_coding processed_transcript MGP_CBAJ_T0040680.1 MGP_CBAJ_G0021602.1 mouse_genomes_project 15 68376904 68494442 - MGP_CBAJ_P0040680 Asap1 protein_coding protein_coding MGP_CBAJ_T0041133.1 MGP_CBAJ_G0021725.1 mouse_genomes_project 15 82553681 82560977 - MGP_CBAJ_P0041133 Mb protein_coding protein_coding MGP_CBAJ_T0041134.1 MGP_CBAJ_G0021725.1 mouse_genomes_project 15 82553681 82595582 - MGP_CBAJ_P0041134 Mb protein_coding protein_coding MGP_CBAJ_T0041135.1 MGP_CBAJ_G0021725.1 mouse_genomes_project 15 82553681 82560917 - MGP_CBAJ_P0041135 Mb protein_coding protein_coding MGP_CBAJ_T0040661.1 MGP_CBAJ_G0021601.1 mouse_genomes_project 15 68063289 68111909 - MGP_CBAJ_P0040661 Fam49b protein_coding unknown_likely_coding MGP_CBAJ_T0040394.1 MGP_CBAJ_G0021495.1 mouse_genomes_project 15 35484459 35489416 + MGP_CBAJ_P0040394 Kcns2 protein_coding protein_coding MGP_CBAJ_T0009959.1 MGP_CBAJ_G0008097.1 mouse_genomes_project 15 92834426 92834521 + Mirlet7c-2 miRNA miRNA MGP_CBAJ_T0041576.1 MGP_CBAJ_G0021859.1 mouse_genomes_project 15 89725989 89740735 + Serhl protein_coding processed_transcript MGP_CBAJ_T0041577.1 MGP_CBAJ_G0021859.1 mouse_genomes_project 15 89729364 89740965 + MGP_CBAJ_P0041577 Serhl protein_coding protein_coding MGP_CBAJ_T0041578.1 MGP_CBAJ_G0021859.1 mouse_genomes_project 15 89734692 89741974 + Serhl protein_coding processed_transcript MGP_CBAJ_T0041579.1 MGP_CBAJ_G0021859.1 mouse_genomes_project 15 89739155 89758415 + MGP_CBAJ_P0041579 Serhl protein_coding protein_coding MGP_CBAJ_T0041580.1 MGP_CBAJ_G0021859.1 mouse_genomes_project 15 89739164 89758412 + Serhl protein_coding retained_intron MGP_CBAJ_T0041581.1 MGP_CBAJ_G0021859.1 mouse_genomes_project 15 89739214 89742010 + Serhl protein_coding retained_intron MGP_CBAJ_T0041582.1 MGP_CBAJ_G0021859.1 mouse_genomes_project 15 89739240 89742035 + Serhl protein_coding retained_intron MGP_CBAJ_T0041583.1 MGP_CBAJ_G0021859.1 mouse_genomes_project 15 89739245 89741592 + MGP_CBAJ_P0041583 Serhl protein_coding protein_coding MGP_CBAJ_T0041584.1 MGP_CBAJ_G0021859.1 mouse_genomes_project 15 89739245 89758415 + MGP_CBAJ_P0041584 Serhl protein_coding protein_coding MGP_CBAJ_T0041585.1 MGP_CBAJ_G0021859.1 mouse_genomes_project 15 89739295 89757834 + MGP_CBAJ_P0041585 Serhl protein_coding protein_coding MGP_CBAJ_T0041586.1 MGP_CBAJ_G0021859.1 mouse_genomes_project 15 89740532 89742170 + Serhl protein_coding retained_intron MGP_CBAJ_T0041587.1 MGP_CBAJ_G0021859.1 mouse_genomes_project 15 89742657 89757307 + Serhl protein_coding retained_intron MGP_CBAJ_T0041588.1 MGP_CBAJ_G0021859.1 mouse_genomes_project 15 89742879 89747300 + Serhl protein_coding retained_intron MGP_CBAJ_T0041589.1 MGP_CBAJ_G0021859.1 mouse_genomes_project 15 89742881 89744750 + Serhl protein_coding retained_intron MGP_CBAJ_T0041590.1 MGP_CBAJ_G0021859.1 mouse_genomes_project 15 89743321 89756056 + MGP_CBAJ_P0041590 Serhl protein_coding nonsense_mediated_decay MGP_CBAJ_T0041591.1 MGP_CBAJ_G0021859.1 mouse_genomes_project 15 89754520 89758270 + Serhl protein_coding processed_transcript MGP_CBAJ_T0041593.1 MGP_CBAJ_G0021859.1 mouse_genomes_project 15 89757137 89758398 + Serhl protein_coding retained_intron MGP_CBAJ_T0098914.1 MGP_CBAJ_G0037169.1 mouse_genomes_project 15 86204929 86205036 - Gm24204 snRNA snRNA MGP_CBAJ_T0040236.1 MGP_CBAJ_G0021437.1 mouse_genomes_project 15 8184313 8354365 - MGP_CBAJ_P0040236 Rai14 protein_coding protein_coding MGP_CBAJ_T0040237.1 MGP_CBAJ_G0021437.1 mouse_genomes_project 15 8184313 8355456 - MGP_CBAJ_P0040237 Rai14 protein_coding protein_coding MGP_CBAJ_T0009952.1 MGP_CBAJ_G0008090.1 mouse_genomes_project 15 89180452 89180512 - Gm27742 miRNA miRNA MGP_CBAJ_T0009946.1 MGP_CBAJ_G0008084.1 mouse_genomes_project 15 88618279 88618348 + Mir33 miRNA miRNA MGP_CBAJ_T0009922.1 MGP_CBAJ_G0008060.1 mouse_genomes_project 15 48473396 48473458 - Gm23562 miRNA miRNA MGP_CBAJ_T0042153.1 MGP_CBAJ_G0022037.1 mouse_genomes_project 15 108811757 108820749 + MGP_CBAJ_P0042153 Aqp6 protein_coding protein_coding MGP_CBAJ_T0040243.1 MGP_CBAJ_G0021442.1 mouse_genomes_project 15 8746007 9075013 + MGP_CBAJ_P0040243 Adamts12 protein_coding protein_coding MGP_CBAJ_T0040287.1 MGP_CBAJ_G0021455.1 mouse_genomes_project 15 17742225 17943473 + MGP_CBAJ_P0040287 Cdh10 protein_coding protein_coding MGP_CBAJ_T0040288.1 MGP_CBAJ_G0021455.1 mouse_genomes_project 15 17742236 17824312 + Cdh10 protein_coding retained_intron MGP_CBAJ_T0040289.1 MGP_CBAJ_G0021455.1 mouse_genomes_project 15 17742255 17899221 + Cdh10 protein_coding retained_intron MGP_CBAJ_T0040290.1 MGP_CBAJ_G0021455.1 mouse_genomes_project 15 17743607 17943473 + MGP_CBAJ_P0040290 Cdh10 protein_coding protein_coding MGP_CBAJ_T0040291.1 MGP_CBAJ_G0021455.1 mouse_genomes_project 15 17820761 17942919 + MGP_CBAJ_P0040291 Cdh10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040292.1 MGP_CBAJ_G0021455.1 mouse_genomes_project 15 17936213 17943473 + Cdh10 protein_coding retained_intron MGP_CBAJ_T0042367.1 MGP_CBAJ_G0022114.1 mouse_genomes_project 15 112285803 112287759 + MGP_CBAJ_P0042367 Sp1 protein_coding protein_coding MGP_CBAJ_T0042368.1 MGP_CBAJ_G0022114.1 mouse_genomes_project 15 112285988 112314442 + MGP_CBAJ_P0042368 Sp1 protein_coding protein_coding MGP_CBAJ_T0042369.1 MGP_CBAJ_G0022114.1 mouse_genomes_project 15 112285993 112314442 + MGP_CBAJ_P0042369 Sp1 protein_coding protein_coding MGP_CBAJ_T0042370.1 MGP_CBAJ_G0022114.1 mouse_genomes_project 15 112286040 112318170 + MGP_CBAJ_P0042370 Sp1 protein_coding protein_coding MGP_CBAJ_T0042371.1 MGP_CBAJ_G0022114.1 mouse_genomes_project 15 112286278 112288141 + MGP_CBAJ_P0042371 Sp1 protein_coding protein_coding MGP_CBAJ_T0042372.1 MGP_CBAJ_G0022114.1 mouse_genomes_project 15 112286792 112287759 + MGP_CBAJ_P0042372 Sp1 protein_coding protein_coding MGP_CBAJ_T0042373.1 MGP_CBAJ_G0022114.1 mouse_genomes_project 15 112287111 112287909 + MGP_CBAJ_P0042373 Sp1 protein_coding protein_coding MGP_CBAJ_T0042374.1 MGP_CBAJ_G0022114.1 mouse_genomes_project 15 112311667 112312588 + Sp1 protein_coding processed_transcript MGP_CBAJ_T0041543.1 MGP_CBAJ_G0021838.1 mouse_genomes_project 15 88627143 88633016 - MGP_CBAJ_P0041543 Shisa8 protein_coding protein_coding MGP_CBAJ_T0040797.1 MGP_CBAJ_G0021633.1 mouse_genomes_project 15 79722653 79752602 - MGP_CBAJ_P0040797 Mroh4 protein_coding protein_coding MGP_CBAJ_T0040798.1 MGP_CBAJ_G0021633.1 mouse_genomes_project 15 79722653 79751098 - MGP_CBAJ_P0040798 Mroh4 protein_coding protein_coding MGP_CBAJ_T0040799.1 MGP_CBAJ_G0021633.1 mouse_genomes_project 15 79723027 79728637 - MGP_CBAJ_P0040799 Mroh4 protein_coding protein_coding MGP_CBAJ_T0040800.1 MGP_CBAJ_G0021633.1 mouse_genomes_project 15 79723039 79724853 - Mroh4 protein_coding retained_intron MGP_CBAJ_T0040801.1 MGP_CBAJ_G0021633.1 mouse_genomes_project 15 79732762 79744661 - MGP_CBAJ_P0040801 Mroh4 protein_coding protein_coding MGP_CBAJ_T0040802.1 MGP_CBAJ_G0021633.1 mouse_genomes_project 15 79747896 79752547 - Mroh4 protein_coding processed_transcript MGP_CBAJ_T0041629.1 MGP_CBAJ_G0021872.1 mouse_genomes_project 15 90545715 90561190 + MGP_CBAJ_P0041629 Mpped1 protein_coding protein_coding MGP_CBAJ_T0041630.1 MGP_CBAJ_G0021872.1 mouse_genomes_project 15 90557849 90645648 + MGP_CBAJ_P0041630 Mpped1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041631.1 MGP_CBAJ_G0021872.1 mouse_genomes_project 15 90560997 90643468 + MGP_CBAJ_P0041631 Mpped1 protein_coding protein_coding MGP_CBAJ_T0041632.1 MGP_CBAJ_G0021872.1 mouse_genomes_project 15 90561072 90643564 + MGP_CBAJ_P0041632 Mpped1 protein_coding protein_coding MGP_CBAJ_T0041633.1 MGP_CBAJ_G0021872.1 mouse_genomes_project 15 90561093 90645642 + MGP_CBAJ_P0041633 Mpped1 protein_coding protein_coding MGP_CBAJ_T0041634.1 MGP_CBAJ_G0021872.1 mouse_genomes_project 15 90568457 90639231 + MGP_CBAJ_P0041634 Mpped1 protein_coding protein_coding MGP_CBAJ_T0041635.1 MGP_CBAJ_G0021872.1 mouse_genomes_project 15 90571917 90643449 + MGP_CBAJ_P0041635 Mpped1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041636.1 MGP_CBAJ_G0021872.1 mouse_genomes_project 15 90616507 90643469 + MGP_CBAJ_P0041636 Mpped1 protein_coding protein_coding MGP_CBAJ_T0041637.1 MGP_CBAJ_G0021872.1 mouse_genomes_project 15 90616540 90641677 + MGP_CBAJ_P0041637 Mpped1 protein_coding protein_coding MGP_CBAJ_T0040646.1 MGP_CBAJ_G0021595.1 mouse_genomes_project 15 63295119 63305169 + MGP_CBAJ_P0040646 Trib1 protein_coding protein_coding MGP_CBAJ_T0040647.1 MGP_CBAJ_G0021595.1 mouse_genomes_project 15 63295422 63302303 + MGP_CBAJ_P0040647 Trib1 protein_coding protein_coding MGP_CBAJ_T0009967.1 MGP_CBAJ_G0008105.1 mouse_genomes_project 15 104409560 104409655 - Gm25070 miRNA miRNA MGP_CBAJ_T0042183.1 MGP_CBAJ_G0022045.1 mouse_genomes_project 15 109042026 109126183 - MGP_CBAJ_P0042183 Lima1 protein_coding protein_coding MGP_CBAJ_T0042184.1 MGP_CBAJ_G0022045.1 mouse_genomes_project 15 109044803 109047498 - Lima1 protein_coding retained_intron MGP_CBAJ_T0042185.1 MGP_CBAJ_G0022045.1 mouse_genomes_project 15 109116355 109154176 - Lima1 protein_coding retained_intron MGP_CBAJ_T0042054.1 MGP_CBAJ_G0022002.1 mouse_genomes_project 15 107490617 107511323 - MGP_CBAJ_P0042054 Kansl2 protein_coding protein_coding MGP_CBAJ_T0042055.1 MGP_CBAJ_G0022002.1 mouse_genomes_project 15 107490897 107511300 - MGP_CBAJ_P0042055 Kansl2 protein_coding protein_coding MGP_CBAJ_T0009919.1 MGP_CBAJ_G0008057.1 mouse_genomes_project 15 39669116 39669191 - Mir6951 miRNA miRNA MGP_CBAJ_T0041615.1 MGP_CBAJ_G0021866.1 mouse_genomes_project 15 90203315 90233986 - MGP_CBAJ_P0041615 Ttll1 protein_coding protein_coding MGP_CBAJ_T0041616.1 MGP_CBAJ_G0021866.1 mouse_genomes_project 15 90222232 90233910 - MGP_CBAJ_P0041616 Ttll1 protein_coding protein_coding MGP_CBAJ_T0041617.1 MGP_CBAJ_G0021866.1 mouse_genomes_project 15 90225495 90234000 - Ttll1 protein_coding processed_transcript MGP_CBAJ_T0041181.1 MGP_CBAJ_G0021740.1 mouse_genomes_project 15 83905188 83919806 - MGP_CBAJ_P0041181 Ift27 protein_coding protein_coding MGP_CBAJ_T0042330.1 MGP_CBAJ_G0022104.1 mouse_genomes_project 15 111996701 112015965 - MGP_CBAJ_P0042330 Csad protein_coding protein_coding MGP_CBAJ_T0011274.1 MGP_CBAJ_G0009412.1 mouse_genomes_project 15 112909546 112909615 + Gm27337 misc_RNA misc_RNA MGP_CBAJ_T0012909.1 MGP_CBAJ_G0011021.1 mouse_genomes_project 15 47970473 47972150 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0041223.1 MGP_CBAJ_G0021756.1 mouse_genomes_project 15 84718098 84726346 + MGP_CBAJ_P0041223 Cdc42ep1 protein_coding protein_coding MGP_CBAJ_T0003569.1 MGP_CBAJ_G0003233.1 mouse_genomes_project 15 113075793 113078622 + Gm10830 antisense antisense MGP_CBAJ_T0042135.1 MGP_CBAJ_G0022031.1 mouse_genomes_project 15 108564376 108587207 + MGP_CBAJ_P0042135 Tmbim6 protein_coding protein_coding MGP_CBAJ_T0042136.1 MGP_CBAJ_G0022031.1 mouse_genomes_project 15 108564480 108585792 + MGP_CBAJ_P0042136 Tmbim6 protein_coding protein_coding MGP_CBAJ_T0042137.1 MGP_CBAJ_G0022031.1 mouse_genomes_project 15 108564480 108585694 + MGP_CBAJ_P0042137 Tmbim6 protein_coding protein_coding MGP_CBAJ_T0042138.1 MGP_CBAJ_G0022031.1 mouse_genomes_project 15 108564516 108585649 + MGP_CBAJ_P0042138 Tmbim6 protein_coding protein_coding MGP_CBAJ_T0042139.1 MGP_CBAJ_G0022031.1 mouse_genomes_project 15 108564713 108585693 + MGP_CBAJ_P0042139 Tmbim6 protein_coding protein_coding MGP_CBAJ_T0042140.1 MGP_CBAJ_G0022031.1 mouse_genomes_project 15 108565087 108583833 + MGP_CBAJ_P0042140 Tmbim6 protein_coding protein_coding MGP_CBAJ_T0042141.1 MGP_CBAJ_G0022031.1 mouse_genomes_project 15 108565105 108585768 + MGP_CBAJ_P0042141 Tmbim6 protein_coding protein_coding MGP_CBAJ_T0042142.1 MGP_CBAJ_G0022031.1 mouse_genomes_project 15 108577490 108579260 + MGP_CBAJ_P0042142 Tmbim6 protein_coding protein_coding MGP_CBAJ_T0042143.1 MGP_CBAJ_G0022031.1 mouse_genomes_project 15 108583029 108585949 + Tmbim6 protein_coding retained_intron MGP_CBAJ_T0040544.1 MGP_CBAJ_G0021551.1 mouse_genomes_project 15 55217861 55277655 + MGP_CBAJ_P0040544 Slc30a8 protein_coding protein_coding MGP_CBAJ_T0040920.1 MGP_CBAJ_G0021676.1 mouse_genomes_project 15 81395308 81397364 + Mapk15 protein_coding processed_transcript MGP_CBAJ_T0040921.1 MGP_CBAJ_G0021676.1 mouse_genomes_project 15 81395308 81400692 + MGP_CBAJ_P0040921 Mapk15 protein_coding protein_coding MGP_CBAJ_T0040922.1 MGP_CBAJ_G0021676.1 mouse_genomes_project 15 81397478 81400692 + Mapk15 protein_coding retained_intron MGP_CBAJ_T0040923.1 MGP_CBAJ_G0021676.1 mouse_genomes_project 15 81398252 81400692 + Mapk15 protein_coding processed_transcript MGP_CBAJ_T0041331.1 MGP_CBAJ_G0021783.1 mouse_genomes_project 15 85679871 85688633 + MGP_CBAJ_P0041331 Cby1 protein_coding protein_coding MGP_CBAJ_T0042188.1 MGP_CBAJ_G0022047.1 mouse_genomes_project 15 109273561 109330719 + MGP_CBAJ_P0042188 Larp4 protein_coding protein_coding MGP_CBAJ_T0042189.1 MGP_CBAJ_G0022047.1 mouse_genomes_project 15 109278421 109325898 + MGP_CBAJ_P0042189 Larp4 protein_coding unknown_likely_coding MGP_CBAJ_T0006671.1 MGP_CBAJ_G0005505.1 mouse_genomes_project 15 58109641 58121307 + Gm26684 lincRNA lincRNA MGP_CBAJ_T0098890.1 MGP_CBAJ_G0037145.1 mouse_genomes_project 15 38678870 38678990 - Gm24833 snRNA snRNA MGP_CBAJ_T0042130.1 MGP_CBAJ_G0022030.1 mouse_genomes_project 15 108481702 108540088 - MGP_CBAJ_P0042130 Fmnl3 protein_coding protein_coding MGP_CBAJ_T0042131.1 MGP_CBAJ_G0022030.1 mouse_genomes_project 15 108481702 108540055 - MGP_CBAJ_P0042131 Fmnl3 protein_coding protein_coding MGP_CBAJ_T0042132.1 MGP_CBAJ_G0022030.1 mouse_genomes_project 15 108481702 108540055 - MGP_CBAJ_P0042132 Fmnl3 protein_coding protein_coding MGP_CBAJ_T0042133.1 MGP_CBAJ_G0022030.1 mouse_genomes_project 15 108490789 108492057 - Fmnl3 protein_coding retained_intron MGP_CBAJ_T0042134.1 MGP_CBAJ_G0022030.1 mouse_genomes_project 15 108494238 108502122 - Fmnl3 protein_coding processed_transcript MGP_CBAJ_T0042365.1 MGP_CBAJ_G0022112.1 mouse_genomes_project 15 112203276 112215856 - MGP_CBAJ_P0042365 Aaas protein_coding protein_coding MGP_CBAJ_T0042340.1 MGP_CBAJ_G0022106.1 mouse_genomes_project 15 112047486 112063439 - MGP_CBAJ_P0042340 Itgb7 protein_coding protein_coding MGP_CBAJ_T0042341.1 MGP_CBAJ_G0022106.1 mouse_genomes_project 15 112056281 112063439 - MGP_CBAJ_P0042341 Itgb7 protein_coding protein_coding MGP_CBAJ_T0040707.1 MGP_CBAJ_G0021612.1 mouse_genomes_project 15 71045404 71236824 + MGP_CBAJ_P0040707 Tg protein_coding protein_coding MGP_CBAJ_T0040708.1 MGP_CBAJ_G0021612.1 mouse_genomes_project 15 71063242 71236710 + MGP_CBAJ_P0040708 Tg protein_coding nonsense_mediated_decay MGP_CBAJ_T0040709.1 MGP_CBAJ_G0021612.1 mouse_genomes_project 15 71078738 71092590 + Tg protein_coding processed_transcript MGP_CBAJ_T0040710.1 MGP_CBAJ_G0021612.1 mouse_genomes_project 15 71082728 71236710 + MGP_CBAJ_P0040710 Tg protein_coding protein_coding MGP_CBAJ_T0040711.1 MGP_CBAJ_G0021612.1 mouse_genomes_project 15 71093343 71102617 + Tg protein_coding processed_transcript MGP_CBAJ_T0040712.1 MGP_CBAJ_G0021612.1 mouse_genomes_project 15 71093985 71107001 + Tg protein_coding processed_transcript MGP_CBAJ_T0040713.1 MGP_CBAJ_G0021612.1 mouse_genomes_project 15 71116224 71236824 + MGP_CBAJ_P0040713 Tg protein_coding protein_coding MGP_CBAJ_T0040719.1 MGP_CBAJ_G0021612.1 mouse_genomes_project 15 71182984 71236824 + Tg protein_coding processed_transcript MGP_CBAJ_T0017205.1 MGP_CBAJ_G0015038.1 mouse_genomes_project 15 68264413 68266999 + Gm20717 processed_transcript processed_transcript MGP_CBAJ_T0040295.1 MGP_CBAJ_G0021458.1 mouse_genomes_project 15 21932569 22891768 + MGP_CBAJ_P0040295 Cdh18 protein_coding protein_coding MGP_CBAJ_T0040296.1 MGP_CBAJ_G0021458.1 mouse_genomes_project 15 22480798 22644362 + Cdh18 protein_coding retained_intron MGP_CBAJ_T0040297.1 MGP_CBAJ_G0021458.1 mouse_genomes_project 15 22480806 22949855 + Cdh18 protein_coding retained_intron MGP_CBAJ_T0040298.1 MGP_CBAJ_G0021458.1 mouse_genomes_project 15 22480806 22983625 + MGP_CBAJ_P0040298 Cdh18 protein_coding protein_coding MGP_CBAJ_T0040299.1 MGP_CBAJ_G0021458.1 mouse_genomes_project 15 22642922 22983272 + MGP_CBAJ_P0040299 Cdh18 protein_coding protein_coding MGP_CBAJ_T0040300.1 MGP_CBAJ_G0021458.1 mouse_genomes_project 15 22643084 22983236 + MGP_CBAJ_P0040300 Cdh18 protein_coding protein_coding MGP_CBAJ_T0041216.1 MGP_CBAJ_G0021754.1 mouse_genomes_project 15 84613823 84631435 - MGP_CBAJ_P0041216 Mfng protein_coding protein_coding MGP_CBAJ_T0041217.1 MGP_CBAJ_G0021754.1 mouse_genomes_project 15 84618477 84625144 - Mfng protein_coding retained_intron MGP_CBAJ_T0041218.1 MGP_CBAJ_G0021754.1 mouse_genomes_project 15 84621853 84625118 - Mfng protein_coding retained_intron MGP_CBAJ_T0041219.1 MGP_CBAJ_G0021754.1 mouse_genomes_project 15 84624819 84629856 - Mfng protein_coding processed_transcript MGP_CBAJ_T0040598.1 MGP_CBAJ_G0021573.1 mouse_genomes_project 15 61350337 61419002 + MGP_CBAJ_P0040598 Tbc1d31 protein_coding protein_coding MGP_CBAJ_T0040599.1 MGP_CBAJ_G0021573.1 mouse_genomes_project 15 61350372 61408343 + Tbc1d31 protein_coding processed_transcript MGP_CBAJ_T0040600.1 MGP_CBAJ_G0021573.1 mouse_genomes_project 15 61350377 61358087 + MGP_CBAJ_P0040600 Tbc1d31 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040601.1 MGP_CBAJ_G0021573.1 mouse_genomes_project 15 61351143 61408423 + Tbc1d31 protein_coding retained_intron MGP_CBAJ_T0040602.1 MGP_CBAJ_G0021573.1 mouse_genomes_project 15 61351993 61397519 + Tbc1d31 protein_coding retained_intron MGP_CBAJ_T0040603.1 MGP_CBAJ_G0021573.1 mouse_genomes_project 15 61354151 61398832 + Tbc1d31 protein_coding retained_intron MGP_CBAJ_T0040604.1 MGP_CBAJ_G0021573.1 mouse_genomes_project 15 61407353 61419008 + MGP_CBAJ_P0040604 Tbc1d31 protein_coding protein_coding MGP_CBAJ_T0009966.1 MGP_CBAJ_G0008104.1 mouse_genomes_project 15 98023076 98023129 + Mir7648 miRNA miRNA MGP_CBAJ_T0041744.1 MGP_CBAJ_G0021912.1 mouse_genomes_project 15 96458435 96461968 + MGP_CBAJ_P0041744 Pim3 protein_coding protein_coding MGP_CBAJ_T0040333.1 MGP_CBAJ_G0021473.1 mouse_genomes_project 15 31509164 31560102 + MGP_CBAJ_P0040333 Dap protein_coding protein_coding MGP_CBAJ_T0040334.1 MGP_CBAJ_G0021473.1 mouse_genomes_project 15 31509238 31561139 + MGP_CBAJ_P0040334 Dap protein_coding protein_coding MGP_CBAJ_T0040335.1 MGP_CBAJ_G0021473.1 mouse_genomes_project 15 31509269 31560257 + MGP_CBAJ_P0040335 Dap protein_coding protein_coding MGP_CBAJ_T0040336.1 MGP_CBAJ_G0021473.1 mouse_genomes_project 15 31555134 31560182 + MGP_CBAJ_P0040336 Dap protein_coding protein_coding MGP_CBAJ_T0040097.1 MGP_CBAJ_G0021402.1 mouse_genomes_project 15 2122012 2135107 - MGP_CBAJ_P0040097 protein_coding protein_coding MGP_CBAJ_T0040098.1 MGP_CBAJ_G0021402.1 mouse_genomes_project 15 2131689 2135052 - MGP_CBAJ_P0040098 protein_coding protein_coding MGP_CBAJ_T0003544.1 MGP_CBAJ_G0003212.1 mouse_genomes_project 15 87686656 87690285 - Gm17025 antisense antisense MGP_CBAJ_T0041288.1 MGP_CBAJ_G0021772.1 mouse_genomes_project 15 85185046 85188797 - MGP_CBAJ_P0041288 Slc16a8 protein_coding protein_coding MGP_CBAJ_T0040659.1 MGP_CBAJ_G0021600.1 mouse_genomes_project 15 67806308 67861024 - MGP_CBAJ_P0040659 Gsdmc protein_coding protein_coding MGP_CBAJ_T0040660.1 MGP_CBAJ_G0021600.1 mouse_genomes_project 15 67808860 67856860 - MGP_CBAJ_P0040660 Gsdmc protein_coding protein_coding MGP_CBAJ_T0041082.1 MGP_CBAJ_G0021709.1 mouse_genomes_project 15 82125586 82142354 - MGP_CBAJ_P0041082 Cyhr1 protein_coding protein_coding MGP_CBAJ_T0041083.1 MGP_CBAJ_G0021709.1 mouse_genomes_project 15 82129116 82139111 - MGP_CBAJ_P0041083 Cyhr1 protein_coding protein_coding MGP_CBAJ_T0041084.1 MGP_CBAJ_G0021709.1 mouse_genomes_project 15 82140330 82142410 - MGP_CBAJ_P0041084 Cyhr1 protein_coding protein_coding MGP_CBAJ_T0041085.1 MGP_CBAJ_G0021709.1 mouse_genomes_project 15 82140334 82142401 - MGP_CBAJ_P0041085 Cyhr1 protein_coding protein_coding MGP_CBAJ_T0012904.1 MGP_CBAJ_G0011016.1 mouse_genomes_project 15 38975237 38976782 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0040301.1 MGP_CBAJ_G0021459.1 mouse_genomes_project 15 24892454 24904235 - MGP_CBAJ_P0040301 9230109A22Rik protein_coding protein_coding MGP_CBAJ_T0040102.1 MGP_CBAJ_G0021406.1 mouse_genomes_project 15 2230715 2268171 + MGP_CBAJ_P0040102 Ttc33 protein_coding protein_coding MGP_CBAJ_T0040103.1 MGP_CBAJ_G0021406.1 mouse_genomes_project 15 2231119 2267872 + MGP_CBAJ_P0040103 Ttc33 protein_coding protein_coding MGP_CBAJ_T0040104.1 MGP_CBAJ_G0021406.1 mouse_genomes_project 15 2232308 2259784 + MGP_CBAJ_P0040104 Ttc33 protein_coding protein_coding MGP_CBAJ_T0042222.1 MGP_CBAJ_G0022059.1 mouse_genomes_project 15 109959838 110008192 - MGP_CBAJ_P0042222 Tfcp2 protein_coding protein_coding MGP_CBAJ_T0006659.1 MGP_CBAJ_G0005496.1 mouse_genomes_project 15 39730584 39778541 - 2310043O21Rik lincRNA lincRNA MGP_CBAJ_T0042008.1 MGP_CBAJ_G0021985.1 mouse_genomes_project 15 106801714 106837710 - MGP_CBAJ_P0042008 Col2a1 protein_coding protein_coding MGP_CBAJ_T0042009.1 MGP_CBAJ_G0021985.1 mouse_genomes_project 15 106801714 106837672 - MGP_CBAJ_P0042009 Col2a1 protein_coding protein_coding MGP_CBAJ_T0042010.1 MGP_CBAJ_G0021985.1 mouse_genomes_project 15 106812415 106815046 - Col2a1 protein_coding retained_intron MGP_CBAJ_T0042011.1 MGP_CBAJ_G0021985.1 mouse_genomes_project 15 106814235 106816571 - Col2a1 protein_coding processed_transcript MGP_CBAJ_T0042012.1 MGP_CBAJ_G0021985.1 mouse_genomes_project 15 106824573 106829171 - Col2a1 protein_coding retained_intron MGP_CBAJ_T0042013.1 MGP_CBAJ_G0021985.1 mouse_genomes_project 15 106824724 106829399 - Col2a1 protein_coding processed_transcript MGP_CBAJ_T0042014.1 MGP_CBAJ_G0021985.1 mouse_genomes_project 15 106828076 106831593 - Col2a1 protein_coding processed_transcript MGP_CBAJ_T0042015.1 MGP_CBAJ_G0021985.1 mouse_genomes_project 15 106828283 106837650 - MGP_CBAJ_P0042015 Col2a1 protein_coding protein_coding MGP_CBAJ_T0042016.1 MGP_CBAJ_G0021985.1 mouse_genomes_project 15 106829948 106837672 - Col2a1 protein_coding retained_intron MGP_CBAJ_T0011258.1 MGP_CBAJ_G0009396.1 mouse_genomes_project 15 16679062 16679370 + Gm22895 misc_RNA misc_RNA MGP_CBAJ_T0040701.1 MGP_CBAJ_G0021608.1 mouse_genomes_project 15 70303544 70617314 - MGP_CBAJ_P0040701 Kcnq3 protein_coding protein_coding MGP_CBAJ_T0040702.1 MGP_CBAJ_G0021608.1 mouse_genomes_project 15 70342892 70416544 - Kcnq3 protein_coding processed_transcript MGP_CBAJ_T0040703.1 MGP_CBAJ_G0021608.1 mouse_genomes_project 15 70614166 70617150 - Kcnq3 protein_coding retained_intron MGP_CBAJ_T0098920.1 MGP_CBAJ_G0037175.1 mouse_genomes_project 15 96420599 96420706 + Gm23144 snRNA snRNA MGP_CBAJ_T0003526.1 MGP_CBAJ_G0003199.1 mouse_genomes_project 15 61115086 61115900 - Gm16006 antisense antisense MGP_CBAJ_T0041444.1 MGP_CBAJ_G0021813.1 mouse_genomes_project 15 87634865 87671139 - MGP_CBAJ_P0041444 St13 protein_coding protein_coding MGP_CBAJ_T0041445.1 MGP_CBAJ_G0021813.1 mouse_genomes_project 15 87636636 87670690 - MGP_CBAJ_P0041445 St13 protein_coding protein_coding MGP_CBAJ_T0041446.1 MGP_CBAJ_G0021813.1 mouse_genomes_project 15 87648949 87670479 - MGP_CBAJ_P0041446 St13 protein_coding protein_coding MGP_CBAJ_T0041447.1 MGP_CBAJ_G0021813.1 mouse_genomes_project 15 87660759 87671173 - MGP_CBAJ_P0041447 St13 protein_coding protein_coding MGP_CBAJ_T0041448.1 MGP_CBAJ_G0021813.1 mouse_genomes_project 15 87663373 87671169 - MGP_CBAJ_P0041448 St13 protein_coding protein_coding MGP_CBAJ_T0101664.1 MGP_CBAJ_G0039695.1 mouse_genomes_project 15 80655134 80662390 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0041252.1 MGP_CBAJ_G0021765.1 mouse_genomes_project 15 84975514 84985306 - MGP_CBAJ_P0041252 Ankrd54 protein_coding protein_coding MGP_CBAJ_T0041253.1 MGP_CBAJ_G0021765.1 mouse_genomes_project 15 84975524 84985306 - Ankrd54 protein_coding retained_intron MGP_CBAJ_T0041254.1 MGP_CBAJ_G0021765.1 mouse_genomes_project 15 84975994 84977834 - MGP_CBAJ_P0041254 Ankrd54 protein_coding protein_coding MGP_CBAJ_T0041255.1 MGP_CBAJ_G0021765.1 mouse_genomes_project 15 84976188 84977765 - MGP_CBAJ_P0041255 Ankrd54 protein_coding protein_coding MGP_CBAJ_T0041256.1 MGP_CBAJ_G0021765.1 mouse_genomes_project 15 84977806 84985303 - MGP_CBAJ_P0041256 Ankrd54 protein_coding protein_coding MGP_CBAJ_T0041257.1 MGP_CBAJ_G0021765.1 mouse_genomes_project 15 84977835 84985257 - MGP_CBAJ_P0041257 Ankrd54 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041258.1 MGP_CBAJ_G0021765.1 mouse_genomes_project 15 84982041 84985314 - Ankrd54 protein_coding retained_intron MGP_CBAJ_T0003519.1 MGP_CBAJ_G0003194.1 mouse_genomes_project 15 3800131 3863520 - Gm2245 antisense antisense MGP_CBAJ_T0040319.1 MGP_CBAJ_G0021464.1 mouse_genomes_project 15 25846006 25860123 + MGP_CBAJ_P0040319 Zfp622 protein_coding protein_coding MGP_CBAJ_T0041407.1 MGP_CBAJ_G0021807.1 mouse_genomes_project 15 87174803 87196261 + MGP_CBAJ_P0041407 Adsl protein_coding protein_coding MGP_CBAJ_T0041408.1 MGP_CBAJ_G0021807.1 mouse_genomes_project 15 87174804 87194321 + MGP_CBAJ_P0041408 Adsl protein_coding protein_coding MGP_CBAJ_T0041409.1 MGP_CBAJ_G0021807.1 mouse_genomes_project 15 87174817 87176414 + Adsl protein_coding retained_intron MGP_CBAJ_T0041410.1 MGP_CBAJ_G0021807.1 mouse_genomes_project 15 87174825 87194432 + MGP_CBAJ_P0041410 Adsl protein_coding nonsense_mediated_decay MGP_CBAJ_T0041411.1 MGP_CBAJ_G0021807.1 mouse_genomes_project 15 87174832 87194061 + MGP_CBAJ_P0041411 Adsl protein_coding protein_coding MGP_CBAJ_T0041412.1 MGP_CBAJ_G0021807.1 mouse_genomes_project 15 87174832 87189802 + MGP_CBAJ_P0041412 Adsl protein_coding nonsense_mediated_decay MGP_CBAJ_T0041413.1 MGP_CBAJ_G0021807.1 mouse_genomes_project 15 87174850 87191436 + MGP_CBAJ_P0041413 Adsl protein_coding nonsense_mediated_decay MGP_CBAJ_T0041414.1 MGP_CBAJ_G0021807.1 mouse_genomes_project 15 87174855 87181726 + Adsl protein_coding retained_intron MGP_CBAJ_T0041415.1 MGP_CBAJ_G0021807.1 mouse_genomes_project 15 87175090 87178125 + MGP_CBAJ_P0041415 Adsl protein_coding protein_coding MGP_CBAJ_T0041416.1 MGP_CBAJ_G0021807.1 mouse_genomes_project 15 87187045 87189677 + Adsl protein_coding retained_intron MGP_CBAJ_T0041417.1 MGP_CBAJ_G0021807.1 mouse_genomes_project 15 87189755 87194068 + MGP_CBAJ_P0041417 Adsl protein_coding nonsense_mediated_decay MGP_CBAJ_T0098884.1 MGP_CBAJ_G0037139.1 mouse_genomes_project 15 23212195 23212353 - Gm23980 snRNA snRNA MGP_CBAJ_T0042291.1 MGP_CBAJ_G0022076.1 mouse_genomes_project 15 111045239 111046180 + Krt7 protein_coding processed_transcript MGP_CBAJ_T0042292.1 MGP_CBAJ_G0022076.1 mouse_genomes_project 15 111045248 111046592 + Krt7 protein_coding processed_transcript MGP_CBAJ_T0042293.1 MGP_CBAJ_G0022076.1 mouse_genomes_project 15 111045248 111065130 + Krt7 protein_coding processed_transcript MGP_CBAJ_T0042294.1 MGP_CBAJ_G0022076.1 mouse_genomes_project 15 111045299 111053678 + MGP_CBAJ_P0042294 Krt7 protein_coding protein_coding MGP_CBAJ_T0042295.1 MGP_CBAJ_G0022076.1 mouse_genomes_project 15 111046598 111067844 + MGP_CBAJ_P0042295 Krt7 protein_coding protein_coding MGP_CBAJ_T0042296.1 MGP_CBAJ_G0022076.1 mouse_genomes_project 15 111046645 111065308 + Krt7 protein_coding retained_intron MGP_CBAJ_T0040373.1 MGP_CBAJ_G0021488.1 mouse_genomes_project 15 34895736 35055304 + MGP_CBAJ_P0040373 Matn2 protein_coding protein_coding MGP_CBAJ_T0040374.1 MGP_CBAJ_G0021488.1 mouse_genomes_project 15 34895737 35055308 + MGP_CBAJ_P0040374 Matn2 protein_coding protein_coding MGP_CBAJ_T0041665.1 MGP_CBAJ_G0021881.1 mouse_genomes_project 15 91476113 91480534 - MGP_CBAJ_P0041665 Ldoc1l protein_coding protein_coding MGP_CBAJ_T0040987.1 MGP_CBAJ_G0021690.1 mouse_genomes_project 15 81753536 81757213 + MGP_CBAJ_P0040987 Gpaa1 protein_coding protein_coding MGP_CBAJ_T0040988.1 MGP_CBAJ_G0021690.1 mouse_genomes_project 15 81753649 81757204 + MGP_CBAJ_P0040988 Gpaa1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040989.1 MGP_CBAJ_G0021690.1 mouse_genomes_project 15 81753650 81757209 + MGP_CBAJ_P0040989 Gpaa1 protein_coding protein_coding MGP_CBAJ_T0040990.1 MGP_CBAJ_G0021690.1 mouse_genomes_project 15 81753655 81755120 + Gpaa1 protein_coding retained_intron MGP_CBAJ_T0040991.1 MGP_CBAJ_G0021690.1 mouse_genomes_project 15 81753818 81754792 + MGP_CBAJ_P0040991 Gpaa1 protein_coding protein_coding MGP_CBAJ_T0040992.1 MGP_CBAJ_G0021690.1 mouse_genomes_project 15 81754304 81755227 + MGP_CBAJ_P0040992 Gpaa1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040993.1 MGP_CBAJ_G0021690.1 mouse_genomes_project 15 81754528 81755923 + Gpaa1 protein_coding retained_intron MGP_CBAJ_T0040994.1 MGP_CBAJ_G0021690.1 mouse_genomes_project 15 81754832 81755553 + MGP_CBAJ_P0040994 Gpaa1 protein_coding protein_coding MGP_CBAJ_T0040995.1 MGP_CBAJ_G0021690.1 mouse_genomes_project 15 81755474 81756599 + Gpaa1 protein_coding retained_intron MGP_CBAJ_T0040996.1 MGP_CBAJ_G0021690.1 mouse_genomes_project 15 81756036 81756604 + Gpaa1 protein_coding retained_intron MGP_CBAJ_T0041831.1 MGP_CBAJ_G0021931.1 mouse_genomes_project 15 97037030 97039210 - MGP_CBAJ_P0041831 Sco2 protein_coding protein_coding MGP_CBAJ_T0017224.1 MGP_CBAJ_G0015050.1 mouse_genomes_project 15 99864824 99914608 + processed_transcript processed_transcript MGP_CBAJ_T0017225.1 MGP_CBAJ_G0015050.1 mouse_genomes_project 15 99874662 99928727 + processed_transcript processed_transcript MGP_CBAJ_T0041249.1 MGP_CBAJ_G0021764.1 mouse_genomes_project 15 84947507 84957852 + MGP_CBAJ_P0041249 Gcat protein_coding protein_coding MGP_CBAJ_T0041250.1 MGP_CBAJ_G0021764.1 mouse_genomes_project 15 84947507 84962033 + MGP_CBAJ_P0041250 Gcat protein_coding protein_coding MGP_CBAJ_T0041251.1 MGP_CBAJ_G0021764.1 mouse_genomes_project 15 84961386 84963060 + MGP_CBAJ_P0041251 Gcat protein_coding protein_coding MGP_CBAJ_T0041892.1 MGP_CBAJ_G0021950.1 mouse_genomes_project 15 99154225 99494896 - MGP_CBAJ_P0041892 Slc2a13 protein_coding protein_coding MGP_CBAJ_T0041893.1 MGP_CBAJ_G0021950.1 mouse_genomes_project 15 99297860 99315304 - Slc2a13 protein_coding processed_transcript MGP_CBAJ_T0041894.1 MGP_CBAJ_G0021950.1 mouse_genomes_project 15 99459986 99494829 - Slc2a13 protein_coding processed_transcript MGP_CBAJ_T0041214.1 MGP_CBAJ_G0021752.1 mouse_genomes_project 15 84439362 84464358 + MGP_CBAJ_P0041214 Cyth4 protein_coding protein_coding MGP_CBAJ_T0098900.1 MGP_CBAJ_G0037155.1 mouse_genomes_project 15 61597988 61598050 - Gm23475 snRNA snRNA MGP_CBAJ_T0040264.1 MGP_CBAJ_G0021449.1 mouse_genomes_project 15 10187769 10222851 + MGP_CBAJ_P0040264 Golph3 protein_coding protein_coding MGP_CBAJ_T0003559.1 MGP_CBAJ_G0003225.1 mouse_genomes_project 15 109026279 109045898 + Gm17058 antisense antisense MGP_CBAJ_T0003568.1 MGP_CBAJ_G0003232.1 mouse_genomes_project 15 110711000 110716312 - antisense antisense MGP_CBAJ_T0040474.1 MGP_CBAJ_G0021521.1 mouse_genomes_project 15 40201787 40236159 + MGP_CBAJ_P0040474 Fzd6 protein_coding protein_coding MGP_CBAJ_T0040475.1 MGP_CBAJ_G0021521.1 mouse_genomes_project 15 40201840 40236159 + MGP_CBAJ_P0040475 Fzd6 protein_coding protein_coding MGP_CBAJ_T0042453.1 MGP_CBAJ_G0022137.1 mouse_genomes_project 15 113231079 113235139 + MGP_CBAJ_P0042453 Hnrnpa1 protein_coding protein_coding MGP_CBAJ_T0006702.1 MGP_CBAJ_G0005523.1 mouse_genomes_project 15 104607456 104635955 - D030018L15Rik lincRNA lincRNA MGP_CBAJ_T0006703.1 MGP_CBAJ_G0005523.1 mouse_genomes_project 15 104607456 104637248 - D030018L15Rik lincRNA lincRNA MGP_CBAJ_T0006704.1 MGP_CBAJ_G0005523.1 mouse_genomes_project 15 104631158 104637374 - D030018L15Rik lincRNA lincRNA MGP_CBAJ_T0011264.1 MGP_CBAJ_G0009402.1 mouse_genomes_project 15 66028867 66028953 + Gm27718 misc_RNA misc_RNA MGP_CBAJ_T0040089.1 MGP_CBAJ_G0021399.1 mouse_genomes_project 15 1735508 1804888 + MGP_CBAJ_P0040089 C6 protein_coding protein_coding MGP_CBAJ_T0040090.1 MGP_CBAJ_G0021399.1 mouse_genomes_project 15 1735549 1768598 + MGP_CBAJ_P0040090 C6 protein_coding protein_coding MGP_CBAJ_T0040091.1 MGP_CBAJ_G0021399.1 mouse_genomes_project 15 1735549 1804470 + MGP_CBAJ_P0040091 C6 protein_coding protein_coding MGP_CBAJ_T0040092.1 MGP_CBAJ_G0021399.1 mouse_genomes_project 15 1735617 1816355 + MGP_CBAJ_P0040092 C6 protein_coding protein_coding MGP_CBAJ_T0040093.1 MGP_CBAJ_G0021399.1 mouse_genomes_project 15 1750013 1792429 + MGP_CBAJ_P0040093 C6 protein_coding unknown_likely_coding MGP_CBAJ_T0040094.1 MGP_CBAJ_G0021399.1 mouse_genomes_project 15 1774076 1792336 + C6 protein_coding processed_transcript MGP_CBAJ_T0042409.1 MGP_CBAJ_G0022121.1 mouse_genomes_project 15 112424746 112425623 - MGP_CBAJ_P0042409 Npff protein_coding protein_coding MGP_CBAJ_T0042411.1 MGP_CBAJ_G0022121.1 mouse_genomes_project 15 112424753 112425850 - Npff protein_coding retained_intron MGP_CBAJ_T0040749.1 MGP_CBAJ_G0021621.1 mouse_genomes_project 15 77425891 77461284 - MGP_CBAJ_P0040749 Kcnk9 protein_coding protein_coding MGP_CBAJ_T0041721.1 MGP_CBAJ_G0021903.1 mouse_genomes_project 15 93267264 93358763 + MGP_CBAJ_P0041721 Gramd4 protein_coding protein_coding MGP_CBAJ_T0041722.1 MGP_CBAJ_G0021903.1 mouse_genomes_project 15 93268296 93358747 + MGP_CBAJ_P0041722 Gramd4 protein_coding protein_coding MGP_CBAJ_T0041723.1 MGP_CBAJ_G0021903.1 mouse_genomes_project 15 93268441 93358760 + MGP_CBAJ_P0041723 Gramd4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041724.1 MGP_CBAJ_G0021903.1 mouse_genomes_project 15 93280377 93343490 + Gramd4 protein_coding processed_transcript MGP_CBAJ_T0041725.1 MGP_CBAJ_G0021903.1 mouse_genomes_project 15 93287259 93306516 + Gramd4 protein_coding processed_transcript MGP_CBAJ_T0009908.1 MGP_CBAJ_G0008046.1 mouse_genomes_project 15 16279260 16279378 - Gm22032 miRNA miRNA MGP_CBAJ_T0042176.1 MGP_CBAJ_G0022043.1 mouse_genomes_project 15 108979006 108986352 + MGP_CBAJ_P0042176 Cox14 protein_coding protein_coding MGP_CBAJ_T0040516.1 MGP_CBAJ_G0021543.1 mouse_genomes_project 15 46519196 46642453 - MGP_CBAJ_P0040516 Sybu protein_coding protein_coding MGP_CBAJ_T0040517.1 MGP_CBAJ_G0021543.1 mouse_genomes_project 15 46519196 46642453 - MGP_CBAJ_P0040517 Sybu protein_coding protein_coding MGP_CBAJ_T0040518.1 MGP_CBAJ_G0021543.1 mouse_genomes_project 15 46519196 46602208 - MGP_CBAJ_P0040518 Sybu protein_coding protein_coding MGP_CBAJ_T0040150.1 MGP_CBAJ_G0021415.1 mouse_genomes_project 15 5120415 5148962 + MGP_CBAJ_P0040150 Gdnf protein_coding protein_coding MGP_CBAJ_T0041618.1 MGP_CBAJ_G0021867.1 mouse_genomes_project 15 90250890 90269097 + MGP_CBAJ_P0041618 Bik protein_coding protein_coding MGP_CBAJ_T0003524.1 MGP_CBAJ_G0003197.1 mouse_genomes_project 15 41127147 41142350 + Gm16291 antisense antisense MGP_CBAJ_T0040395.1 MGP_CBAJ_G0021496.1 mouse_genomes_project 15 35533015 35834591 - MGP_CBAJ_P0040395 Stk3 protein_coding protein_coding MGP_CBAJ_T0040396.1 MGP_CBAJ_G0021496.1 mouse_genomes_project 15 35533192 35834535 - MGP_CBAJ_P0040396 Stk3 protein_coding protein_coding MGP_CBAJ_T0040397.1 MGP_CBAJ_G0021496.1 mouse_genomes_project 15 35617067 35657451 - Stk3 protein_coding retained_intron MGP_CBAJ_T0040398.1 MGP_CBAJ_G0021496.1 mouse_genomes_project 15 35744959 35834454 - MGP_CBAJ_P0040398 Stk3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0012940.1 MGP_CBAJ_G0011052.1 mouse_genomes_project 15 108752926 108753283 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006686.1 MGP_CBAJ_G0005511.1 mouse_genomes_project 15 84744693 84748562 - Gm26634 lincRNA lincRNA MGP_CBAJ_T0097964.1 MGP_CBAJ_G0036237.1 mouse_genomes_project 15 88806427 88806546 + n-R5s41 rRNA rRNA MGP_CBAJ_T0012932.1 MGP_CBAJ_G0011044.1 mouse_genomes_project 15 91025483 91025768 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0040623.1 MGP_CBAJ_G0021579.1 mouse_genomes_project 15 61596216 61615331 + MGP_CBAJ_P0040623 Wdyhv1 protein_coding protein_coding MGP_CBAJ_T0041352.1 MGP_CBAJ_G0021790.1 mouse_genomes_project 15 85834493 85878828 - MGP_CBAJ_P0041352 Npcd protein_coding protein_coding MGP_CBAJ_T0041353.1 MGP_CBAJ_G0021790.1 mouse_genomes_project 15 85834493 85878828 - MGP_CBAJ_P0041353 Npcd protein_coding protein_coding MGP_CBAJ_T0041443.1 MGP_CBAJ_G0021812.1 mouse_genomes_project 15 87584553 87631962 - MGP_CBAJ_P0041443 Slc25a17 protein_coding protein_coding MGP_CBAJ_T0098905.1 MGP_CBAJ_G0037160.1 mouse_genomes_project 15 70025475 70025664 + Gm23907 snRNA snRNA MGP_CBAJ_T0100151.1 MGP_CBAJ_G0038406.1 mouse_genomes_project 15 26911187 26911318 - Gm23903 snoRNA snoRNA MGP_CBAJ_T0042208.1 MGP_CBAJ_G0022053.1 mouse_genomes_project 15 109766151 109783377 + MGP_CBAJ_P0042208 protein_coding protein_coding MGP_CBAJ_T0009935.1 MGP_CBAJ_G0008073.1 mouse_genomes_project 15 84129599 84129661 + Mir7676-2 miRNA miRNA MGP_CBAJ_T0012914.1 MGP_CBAJ_G0011026.1 mouse_genomes_project 15 63691516 63691966 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0042039.1 MGP_CBAJ_G0021995.1 mouse_genomes_project 15 107261012 107261930 - MGP_CBAJ_P0042039 Olfr284 protein_coding protein_coding MGP_CBAJ_T0042040.1 MGP_CBAJ_G0021995.1 mouse_genomes_project 15 107261012 107261978 - MGP_CBAJ_P0042040 Olfr284 protein_coding protein_coding MGP_CBAJ_T0040817.1 MGP_CBAJ_G0021643.1 mouse_genomes_project 15 79906428 79914345 - MGP_CBAJ_P0040817 D730001G18Rik protein_coding protein_coding MGP_CBAJ_T0040818.1 MGP_CBAJ_G0021643.1 mouse_genomes_project 15 79906429 79914380 - MGP_CBAJ_P0040818 D730001G18Rik protein_coding protein_coding MGP_CBAJ_T0009917.1 MGP_CBAJ_G0008055.1 mouse_genomes_project 15 37728839 37728913 - Gm25303 miRNA miRNA MGP_CBAJ_T0040822.1 MGP_CBAJ_G0021646.1 mouse_genomes_project 15 79956894 79965079 - protein_coding processed_transcript MGP_CBAJ_T0040823.1 MGP_CBAJ_G0021646.1 mouse_genomes_project 15 79956894 79965079 - protein_coding processed_transcript MGP_CBAJ_T0040824.1 MGP_CBAJ_G0021646.1 mouse_genomes_project 15 79956894 79967598 - MGP_CBAJ_P0040824 protein_coding protein_coding MGP_CBAJ_T0042275.1 MGP_CBAJ_G0022070.1 mouse_genomes_project 15 110709606 110739414 + MGP_CBAJ_P0042275 Acvrl1 protein_coding protein_coding MGP_CBAJ_T0042276.1 MGP_CBAJ_G0022070.1 mouse_genomes_project 15 110709621 110719417 + MGP_CBAJ_P0042276 Acvrl1 protein_coding protein_coding MGP_CBAJ_T0042277.1 MGP_CBAJ_G0022070.1 mouse_genomes_project 15 110709635 110737714 + MGP_CBAJ_P0042277 Acvrl1 protein_coding protein_coding MGP_CBAJ_T0042278.1 MGP_CBAJ_G0022070.1 mouse_genomes_project 15 110709635 110720025 + MGP_CBAJ_P0042278 Acvrl1 protein_coding protein_coding MGP_CBAJ_T0042279.1 MGP_CBAJ_G0022070.1 mouse_genomes_project 15 110709658 110737713 + MGP_CBAJ_P0042279 Acvrl1 protein_coding protein_coding MGP_CBAJ_T0042280.1 MGP_CBAJ_G0022070.1 mouse_genomes_project 15 110710006 110737715 + MGP_CBAJ_P0042280 Acvrl1 protein_coding protein_coding MGP_CBAJ_T0042281.1 MGP_CBAJ_G0022070.1 mouse_genomes_project 15 110710008 110737713 + MGP_CBAJ_P0042281 Acvrl1 protein_coding protein_coding MGP_CBAJ_T0042282.1 MGP_CBAJ_G0022070.1 mouse_genomes_project 15 110718138 110720176 + MGP_CBAJ_P0042282 Acvrl1 protein_coding protein_coding MGP_CBAJ_T0042283.1 MGP_CBAJ_G0022070.1 mouse_genomes_project 15 110718855 110739414 + MGP_CBAJ_P0042283 Acvrl1 protein_coding protein_coding MGP_CBAJ_T0042284.1 MGP_CBAJ_G0022070.1 mouse_genomes_project 15 110720361 110721735 + Acvrl1 protein_coding retained_intron MGP_CBAJ_T0042285.1 MGP_CBAJ_G0022070.1 mouse_genomes_project 15 110722302 110733718 + Acvrl1 protein_coding processed_transcript MGP_CBAJ_T0006646.1 MGP_CBAJ_G0005487.1 mouse_genomes_project 15 9789242 9794882 + 1700047G03Rik lincRNA lincRNA MGP_CBAJ_T0006647.1 MGP_CBAJ_G0005487.1 mouse_genomes_project 15 9789303 9795491 + 1700047G03Rik lincRNA lincRNA MGP_CBAJ_T0006648.1 MGP_CBAJ_G0005487.1 mouse_genomes_project 15 9789390 9794913 + 1700047G03Rik lincRNA lincRNA MGP_CBAJ_T0006649.1 MGP_CBAJ_G0005487.1 mouse_genomes_project 15 9792012 9795476 + 1700047G03Rik lincRNA lincRNA MGP_CBAJ_T0009918.1 MGP_CBAJ_G0008056.1 mouse_genomes_project 15 38402602 38402728 - Gm23654 miRNA miRNA MGP_CBAJ_T0041709.1 MGP_CBAJ_G0021900.1 mouse_genomes_project 15 93029953 93051442 + MGP_CBAJ_P0041709 Gtse1 protein_coding protein_coding MGP_CBAJ_T0006715.1 MGP_CBAJ_G0005531.1 mouse_genomes_project 15 110906099 110909503 + 6030408B16Rik lincRNA lincRNA MGP_CBAJ_T0006716.1 MGP_CBAJ_G0005531.1 mouse_genomes_project 15 110906119 110910308 + 6030408B16Rik lincRNA lincRNA MGP_CBAJ_T0041651.1 MGP_CBAJ_G0021878.1 mouse_genomes_project 15 91087829 91194640 + MGP_CBAJ_P0041651 Parvb protein_coding protein_coding MGP_CBAJ_T0041652.1 MGP_CBAJ_G0021878.1 mouse_genomes_project 15 91087852 91127901 + MGP_CBAJ_P0041652 Parvb protein_coding nonsense_mediated_decay MGP_CBAJ_T0041653.1 MGP_CBAJ_G0021878.1 mouse_genomes_project 15 91113541 91152148 + Parvb protein_coding processed_transcript MGP_CBAJ_T0041567.1 MGP_CBAJ_G0021852.1 mouse_genomes_project 15 89190080 89195430 - MGP_CBAJ_P0041567 protein_coding protein_coding MGP_CBAJ_T0009937.1 MGP_CBAJ_G0008075.1 mouse_genomes_project 15 84911157 84911219 + Mir6956 miRNA miRNA MGP_CBAJ_T0040393.1 MGP_CBAJ_G0021494.1 mouse_genomes_project 15 35213648 35331248 - MGP_CBAJ_P0040393 Nipal2 protein_coding protein_coding MGP_CBAJ_T0009949.1 MGP_CBAJ_G0008087.1 mouse_genomes_project 15 88950919 88950979 + Gm27622 miRNA miRNA MGP_CBAJ_T0041323.1 MGP_CBAJ_G0021779.1 mouse_genomes_project 15 85517966 85534682 + MGP_CBAJ_P0041323 Kdelr3 protein_coding protein_coding MGP_CBAJ_T0003532.1 MGP_CBAJ_G0003205.1 mouse_genomes_project 15 76660639 76664314 + Gm16308 antisense antisense MGP_CBAJ_T0042321.1 MGP_CBAJ_G0022100.1 mouse_genomes_project 15 111907722 111921340 + MGP_CBAJ_P0042321 Tns2 protein_coding protein_coding MGP_CBAJ_T0042322.1 MGP_CBAJ_G0022100.1 mouse_genomes_project 15 111907722 111921350 + MGP_CBAJ_P0042322 Tns2 protein_coding protein_coding MGP_CBAJ_T0003557.1 MGP_CBAJ_G0003223.1 mouse_genomes_project 15 108608222 108618156 + Nckap5los antisense antisense MGP_CBAJ_T0006706.1 MGP_CBAJ_G0005525.1 mouse_genomes_project 15 104802953 104812931 - 4833422M21Rik lincRNA lincRNA MGP_CBAJ_T0006707.1 MGP_CBAJ_G0005525.1 mouse_genomes_project 15 104802953 104829136 - 4833422M21Rik lincRNA lincRNA MGP_CBAJ_T0006708.1 MGP_CBAJ_G0005525.1 mouse_genomes_project 15 104823402 104829068 - 4833422M21Rik lincRNA lincRNA MGP_CBAJ_T0041689.1 MGP_CBAJ_G0021893.1 mouse_genomes_project 15 92398537 92543210 + MGP_CBAJ_P0041689 Atxn10 protein_coding protein_coding MGP_CBAJ_T0040087.1 MGP_CBAJ_G0021398.1 mouse_genomes_project 15 1356637 1518306 + MGP_CBAJ_P0040087 Plcxd3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040088.1 MGP_CBAJ_G0021398.1 mouse_genomes_project 15 1356650 1584004 + MGP_CBAJ_P0040088 Plcxd3 protein_coding protein_coding MGP_CBAJ_T0040240.1 MGP_CBAJ_G0021439.1 mouse_genomes_project 15 8654805 8673292 + MGP_CBAJ_P0040240 Amacr protein_coding protein_coding MGP_CBAJ_T0042233.1 MGP_CBAJ_G0022061.1 mouse_genomes_project 15 110092271 110097862 + MGP_CBAJ_P0042233 Dazap2 protein_coding protein_coding MGP_CBAJ_T0098898.1 MGP_CBAJ_G0037153.1 mouse_genomes_project 15 56407912 56407978 + Gm27926 snRNA snRNA MGP_CBAJ_T0000902.1 MGP_CBAJ_G0000837.1 mouse_genomes_project 15 20358863 20359282 + TEC TEC MGP_CBAJ_T0009954.1 MGP_CBAJ_G0008092.1 mouse_genomes_project 15 89380670 89380730 - Gm27618 miRNA miRNA MGP_CBAJ_T0098927.1 MGP_CBAJ_G0037182.1 mouse_genomes_project 15 109070093 109070200 - Gm25897 snRNA snRNA MGP_CBAJ_T0100167.1 MGP_CBAJ_G0038422.1 mouse_genomes_project 15 46805068 46805211 + Gm23343 snoRNA snoRNA MGP_CBAJ_T0042068.1 MGP_CBAJ_G0022006.1 mouse_genomes_project 15 107629461 107644864 + MGP_CBAJ_P0042068 Cacnb3 protein_coding protein_coding MGP_CBAJ_T0042069.1 MGP_CBAJ_G0022006.1 mouse_genomes_project 15 107634652 107644864 + MGP_CBAJ_P0042069 Cacnb3 protein_coding protein_coding MGP_CBAJ_T0009963.1 MGP_CBAJ_G0008101.1 mouse_genomes_project 15 96786525 96786586 - Mir7118 miRNA miRNA MGP_CBAJ_T0042108.1 MGP_CBAJ_G0022023.1 mouse_genomes_project 15 108196676 108199805 - MGP_CBAJ_P0042108 C1ql4 protein_coding protein_coding MGP_CBAJ_T0041226.1 MGP_CBAJ_G0021759.1 mouse_genomes_project 15 84780857 84810672 + Sh3bp1 protein_coding processed_transcript MGP_CBAJ_T0041227.1 MGP_CBAJ_G0021759.1 mouse_genomes_project 15 84780957 84796516 + MGP_CBAJ_P0041227 Sh3bp1 protein_coding protein_coding MGP_CBAJ_T0041228.1 MGP_CBAJ_G0021759.1 mouse_genomes_project 15 84780957 84796512 + MGP_CBAJ_P0041228 Sh3bp1 protein_coding protein_coding MGP_CBAJ_T0041229.1 MGP_CBAJ_G0021759.1 mouse_genomes_project 15 84780957 84796516 + MGP_CBAJ_P0041229 Sh3bp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041230.1 MGP_CBAJ_G0021759.1 mouse_genomes_project 15 84780957 84796516 + MGP_CBAJ_P0041230 Sh3bp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041231.1 MGP_CBAJ_G0021759.1 mouse_genomes_project 15 84780957 84796516 + MGP_CBAJ_P0041231 Sh3bp1 protein_coding protein_coding MGP_CBAJ_T0041232.1 MGP_CBAJ_G0021759.1 mouse_genomes_project 15 84798392 84811157 + MGP_CBAJ_P0041232 Sh3bp1 protein_coding protein_coding MGP_CBAJ_T0042303.1 MGP_CBAJ_G0022083.1 mouse_genomes_project 15 111255234 111265811 - MGP_CBAJ_P0042303 Krt90 protein_coding protein_coding MGP_CBAJ_T0042323.1 MGP_CBAJ_G0022101.1 mouse_genomes_project 15 111921476 111945748 - Spryd3 protein_coding retained_intron MGP_CBAJ_T0042324.1 MGP_CBAJ_G0022101.1 mouse_genomes_project 15 111921476 111945790 - MGP_CBAJ_P0042324 Spryd3 protein_coding protein_coding MGP_CBAJ_T0042325.1 MGP_CBAJ_G0022101.1 mouse_genomes_project 15 111925985 111938420 - Spryd3 protein_coding processed_transcript MGP_CBAJ_T0042326.1 MGP_CBAJ_G0022101.1 mouse_genomes_project 15 111939752 111940443 - Spryd3 protein_coding retained_intron MGP_CBAJ_T0098896.1 MGP_CBAJ_G0037151.1 mouse_genomes_project 15 52012304 52012410 + Gm23848 snRNA snRNA MGP_CBAJ_T0040330.1 MGP_CBAJ_G0021470.1 mouse_genomes_project 15 27637902 27946207 - MGP_CBAJ_P0040330 Trio protein_coding protein_coding MGP_CBAJ_T0041787.1 MGP_CBAJ_G0021921.1 mouse_genomes_project 15 96747101 96757593 - MGP_CBAJ_P0041787 Mapk12 protein_coding protein_coding MGP_CBAJ_T0012900.1 MGP_CBAJ_G0011012.1 mouse_genomes_project 15 37699111 37721026 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006697.1 MGP_CBAJ_G0005518.1 mouse_genomes_project 15 92681541 92694121 + AU022754 lincRNA lincRNA MGP_CBAJ_T0040851.1 MGP_CBAJ_G0021655.1 mouse_genomes_project 15 80543280 80547047 + MGP_CBAJ_P0040851 protein_coding protein_coding MGP_CBAJ_T0040854.1 MGP_CBAJ_G0021655.1 mouse_genomes_project 15 80543297 80546591 + MGP_CBAJ_P0040854 protein_coding protein_coding MGP_CBAJ_T0040855.1 MGP_CBAJ_G0021655.1 mouse_genomes_project 15 80543297 80547043 + MGP_CBAJ_P0040855 protein_coding protein_coding MGP_CBAJ_T0040856.1 MGP_CBAJ_G0021655.1 mouse_genomes_project 15 80543306 80546535 + MGP_CBAJ_P0040856 protein_coding protein_coding MGP_CBAJ_T0040857.1 MGP_CBAJ_G0021655.1 mouse_genomes_project 15 80543322 80546733 + MGP_CBAJ_P0040857 protein_coding protein_coding MGP_CBAJ_T0042105.1 MGP_CBAJ_G0022021.1 mouse_genomes_project 15 108164827 108168646 + MGP_CBAJ_P0042105 Prph protein_coding protein_coding MGP_CBAJ_T0042106.1 MGP_CBAJ_G0022021.1 mouse_genomes_project 15 108164827 108168646 + MGP_CBAJ_P0042106 Prph protein_coding protein_coding MGP_CBAJ_T0041507.1 MGP_CBAJ_G0021828.1 mouse_genomes_project 15 88307956 88324892 + MGP_CBAJ_P0041507 Csdc2 protein_coding protein_coding MGP_CBAJ_T0041508.1 MGP_CBAJ_G0021828.1 mouse_genomes_project 15 88308181 88320825 + MGP_CBAJ_P0041508 Csdc2 protein_coding protein_coding MGP_CBAJ_T0041509.1 MGP_CBAJ_G0021828.1 mouse_genomes_project 15 88319686 88320843 + Csdc2 protein_coding processed_transcript MGP_CBAJ_T0041510.1 MGP_CBAJ_G0021828.1 mouse_genomes_project 15 88320916 88324885 + Csdc2 protein_coding retained_intron MGP_CBAJ_T0097962.1 MGP_CBAJ_G0036235.1 mouse_genomes_project 15 40376555 40376663 - n-R5s39 rRNA rRNA MGP_CBAJ_T0098284.1 MGP_CBAJ_G0036553.1 mouse_genomes_project 15 38865414 38867970 - Gm15940 sense_intronic sense_intronic MGP_CBAJ_T0041967.1 MGP_CBAJ_G0021975.1 mouse_genomes_project 15 105698255 105759381 - MGP_CBAJ_P0041967 Slc38a4 protein_coding protein_coding MGP_CBAJ_T0041968.1 MGP_CBAJ_G0021975.1 mouse_genomes_project 15 105700197 105723745 - MGP_CBAJ_P0041968 Slc38a4 protein_coding protein_coding MGP_CBAJ_T0041889.1 MGP_CBAJ_G0021949.1 mouse_genomes_project 15 99076568 99147418 + MGP_CBAJ_P0041889 CN725425 protein_coding protein_coding MGP_CBAJ_T0041890.1 MGP_CBAJ_G0021949.1 mouse_genomes_project 15 99076650 99147418 + MGP_CBAJ_P0041890 CN725425 protein_coding unknown_likely_coding MGP_CBAJ_T0041891.1 MGP_CBAJ_G0021949.1 mouse_genomes_project 15 99110258 99147409 + MGP_CBAJ_P0041891 CN725425 protein_coding protein_coding MGP_CBAJ_T0040891.1 MGP_CBAJ_G0021669.1 mouse_genomes_project 15 81295366 81309926 - MGP_CBAJ_P0040891 Eef1d protein_coding protein_coding MGP_CBAJ_T0040892.1 MGP_CBAJ_G0021669.1 mouse_genomes_project 15 81295370 81309911 - MGP_CBAJ_P0040892 Eef1d protein_coding protein_coding MGP_CBAJ_T0040893.1 MGP_CBAJ_G0021669.1 mouse_genomes_project 15 81295370 81309905 - MGP_CBAJ_P0040893 Eef1d protein_coding protein_coding MGP_CBAJ_T0040894.1 MGP_CBAJ_G0021669.1 mouse_genomes_project 15 81296058 81309877 - MGP_CBAJ_P0040894 Eef1d protein_coding protein_coding MGP_CBAJ_T0040895.1 MGP_CBAJ_G0021669.1 mouse_genomes_project 15 81296058 81309868 - MGP_CBAJ_P0040895 Eef1d protein_coding protein_coding MGP_CBAJ_T0040896.1 MGP_CBAJ_G0021669.1 mouse_genomes_project 15 81296058 81304127 - MGP_CBAJ_P0040896 Eef1d protein_coding protein_coding MGP_CBAJ_T0040897.1 MGP_CBAJ_G0021669.1 mouse_genomes_project 15 81296060 81309906 - MGP_CBAJ_P0040897 Eef1d protein_coding protein_coding MGP_CBAJ_T0040898.1 MGP_CBAJ_G0021669.1 mouse_genomes_project 15 81296060 81309890 - MGP_CBAJ_P0040898 Eef1d protein_coding protein_coding MGP_CBAJ_T0040899.1 MGP_CBAJ_G0021669.1 mouse_genomes_project 15 81296062 81297311 - Eef1d protein_coding retained_intron MGP_CBAJ_T0040900.1 MGP_CBAJ_G0021669.1 mouse_genomes_project 15 81296374 81309900 - MGP_CBAJ_P0040900 Eef1d protein_coding protein_coding MGP_CBAJ_T0040901.1 MGP_CBAJ_G0021669.1 mouse_genomes_project 15 81296844 81310127 - MGP_CBAJ_P0040901 Eef1d protein_coding protein_coding MGP_CBAJ_T0040902.1 MGP_CBAJ_G0021669.1 mouse_genomes_project 15 81296851 81309890 - MGP_CBAJ_P0040902 Eef1d protein_coding protein_coding MGP_CBAJ_T0040903.1 MGP_CBAJ_G0021669.1 mouse_genomes_project 15 81296964 81310118 - MGP_CBAJ_P0040903 Eef1d protein_coding protein_coding MGP_CBAJ_T0040904.1 MGP_CBAJ_G0021669.1 mouse_genomes_project 15 81297246 81301826 - Eef1d protein_coding retained_intron MGP_CBAJ_T0040905.1 MGP_CBAJ_G0021669.1 mouse_genomes_project 15 81298676 81309890 - Eef1d protein_coding retained_intron MGP_CBAJ_T0040906.1 MGP_CBAJ_G0021669.1 mouse_genomes_project 15 81303693 81310118 - MGP_CBAJ_P0040906 Eef1d protein_coding protein_coding MGP_CBAJ_T0040907.1 MGP_CBAJ_G0021669.1 mouse_genomes_project 15 81303832 81305934 - MGP_CBAJ_P0040907 Eef1d protein_coding protein_coding MGP_CBAJ_T0040908.1 MGP_CBAJ_G0021669.1 mouse_genomes_project 15 81304076 81309862 - MGP_CBAJ_P0040908 Eef1d protein_coding protein_coding MGP_CBAJ_T0042097.1 MGP_CBAJ_G0022018.1 mouse_genomes_project 15 107947577 107953069 - MGP_CBAJ_P0042097 Dhh protein_coding protein_coding MGP_CBAJ_T0041536.1 MGP_CBAJ_G0021835.1 mouse_genomes_project 15 88462551 88539274 + MGP_CBAJ_P0041536 Mei1 protein_coding protein_coding MGP_CBAJ_T0041537.1 MGP_CBAJ_G0021835.1 mouse_genomes_project 15 88462708 88539438 + MGP_CBAJ_P0041537 Mei1 protein_coding unknown_likely_coding MGP_CBAJ_T0041538.1 MGP_CBAJ_G0021835.1 mouse_genomes_project 15 88481663 88539424 + MGP_CBAJ_P0041538 Mei1 protein_coding protein_coding MGP_CBAJ_T0041539.1 MGP_CBAJ_G0021835.1 mouse_genomes_project 15 88481675 88539426 + MGP_CBAJ_P0041539 Mei1 protein_coding protein_coding MGP_CBAJ_T0041540.1 MGP_CBAJ_G0021835.1 mouse_genomes_project 15 88482376 88539351 + MGP_CBAJ_P0041540 Mei1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0009925.1 MGP_CBAJ_G0008063.1 mouse_genomes_project 15 66566388 66566458 - Gm24810 miRNA miRNA MGP_CBAJ_T0042113.1 MGP_CBAJ_G0022027.1 mouse_genomes_project 15 108397961 108409998 - MGP_CBAJ_P0042113 Mcrs1 protein_coding protein_coding MGP_CBAJ_T0041044.1 MGP_CBAJ_G0021700.1 mouse_genomes_project 15 81922433 81953586 + MGP_CBAJ_P0041044 Hsf1 protein_coding protein_coding MGP_CBAJ_T0041045.1 MGP_CBAJ_G0021700.1 mouse_genomes_project 15 81922589 81953236 + MGP_CBAJ_P0041045 Hsf1 protein_coding unknown_likely_coding MGP_CBAJ_T0009929.1 MGP_CBAJ_G0008067.1 mouse_genomes_project 15 78239468 78239536 - Mir151 miRNA miRNA MGP_CBAJ_T0040317.1 MGP_CBAJ_G0021463.1 mouse_genomes_project 15 25688373 25822286 + MGP_CBAJ_P0040317 Fam134b protein_coding protein_coding MGP_CBAJ_T0040318.1 MGP_CBAJ_G0021463.1 mouse_genomes_project 15 25788122 25820938 + MGP_CBAJ_P0040318 Fam134b protein_coding protein_coding MGP_CBAJ_T0040542.1 MGP_CBAJ_G0021549.1 mouse_genomes_project 15 54835142 54868414 - MGP_CBAJ_P0040542 Rad21 protein_coding unknown_likely_coding MGP_CBAJ_T0000909.1 MGP_CBAJ_G0000844.1 mouse_genomes_project 15 92776680 92780026 + TEC TEC MGP_CBAJ_T0009933.1 MGP_CBAJ_G0008071.1 mouse_genomes_project 15 81707722 81707812 - Mir3079 miRNA miRNA MGP_CBAJ_T0017210.1 MGP_CBAJ_G0015042.1 mouse_genomes_project 15 78676305 78682803 + 1700010B13Rik processed_transcript lincRNA MGP_CBAJ_T0017211.1 MGP_CBAJ_G0015042.1 mouse_genomes_project 15 78676327 78678056 + 1700010B13Rik processed_transcript retained_intron MGP_CBAJ_T0041553.1 MGP_CBAJ_G0021845.1 mouse_genomes_project 15 88802720 88807058 + Fam109b protein_coding processed_transcript MGP_CBAJ_T0041555.1 MGP_CBAJ_G0021845.1 mouse_genomes_project 15 88804327 88807072 + Fam109b protein_coding processed_transcript MGP_CBAJ_T0041556.1 MGP_CBAJ_G0021845.1 mouse_genomes_project 15 88804632 88809524 + MGP_CBAJ_P0041556 Fam109b protein_coding protein_coding MGP_CBAJ_T0041558.1 MGP_CBAJ_G0021845.1 mouse_genomes_project 15 88804953 88809511 + MGP_CBAJ_P0041558 Fam109b protein_coding protein_coding MGP_CBAJ_T0041650.1 MGP_CBAJ_G0021877.1 mouse_genomes_project 15 91041681 91066699 + MGP_CBAJ_P0041650 Samm50 protein_coding protein_coding MGP_CBAJ_T0040276.1 MGP_CBAJ_G0021451.1 mouse_genomes_project 15 10736021 10755644 - MGP_CBAJ_P0040276 6030458C11Rik protein_coding protein_coding MGP_CBAJ_T0006717.1 MGP_CBAJ_G0005532.1 mouse_genomes_project 15 112116767 112120326 + lincRNA lincRNA MGP_CBAJ_T0009923.1 MGP_CBAJ_G0008061.1 mouse_genomes_project 15 53609469 53609559 - Mir1907 miRNA miRNA MGP_CBAJ_T0012896.1 MGP_CBAJ_G0011008.1 mouse_genomes_project 15 16979249 16984132 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100174.1 MGP_CBAJ_G0038429.1 mouse_genomes_project 15 65171418 65171552 - Gm24696 snoRNA snoRNA MGP_CBAJ_T0011254.1 MGP_CBAJ_G0009392.1 mouse_genomes_project 15 761606 761876 + Gm23228 misc_RNA misc_RNA MGP_CBAJ_T0000911.1 MGP_CBAJ_G0000846.1 mouse_genomes_project 15 105340863 105341328 + TEC TEC MGP_CBAJ_T0041071.1 MGP_CBAJ_G0021706.1 mouse_genomes_project 15 82060592 82076246 - MGP_CBAJ_P0041071 Cpsf1 protein_coding protein_coding MGP_CBAJ_T0041500.1 MGP_CBAJ_G0021826.1 mouse_genomes_project 15 88236092 88284220 + MGP_CBAJ_P0041500 Aco2 protein_coding protein_coding MGP_CBAJ_T0041501.1 MGP_CBAJ_G0021826.1 mouse_genomes_project 15 88236267 88255784 + Aco2 protein_coding retained_intron MGP_CBAJ_T0041502.1 MGP_CBAJ_G0021826.1 mouse_genomes_project 15 88236267 88255785 + Aco2 protein_coding processed_transcript MGP_CBAJ_T0041503.1 MGP_CBAJ_G0021826.1 mouse_genomes_project 15 88276138 88279598 + Aco2 protein_coding retained_intron MGP_CBAJ_T0041504.1 MGP_CBAJ_G0021826.1 mouse_genomes_project 15 88276418 88279252 + Aco2 protein_coding retained_intron MGP_CBAJ_T0041505.1 MGP_CBAJ_G0021826.1 mouse_genomes_project 15 88279377 88282380 + Aco2 protein_coding retained_intron MGP_CBAJ_T0100166.1 MGP_CBAJ_G0038421.1 mouse_genomes_project 15 46193762 46193894 + Gm25093 snoRNA snoRNA MGP_CBAJ_T0098925.1 MGP_CBAJ_G0037180.1 mouse_genomes_project 15 105308917 105309025 + Gm22045 snRNA snRNA MGP_CBAJ_T0009956.1 MGP_CBAJ_G0008094.1 mouse_genomes_project 15 90240964 90241041 + Gm24575 miRNA miRNA MGP_CBAJ_T0041661.1 MGP_CBAJ_G0021880.1 mouse_genomes_project 15 91278430 91354157 - MGP_CBAJ_P0041661 1810041L15Rik protein_coding protein_coding MGP_CBAJ_T0041662.1 MGP_CBAJ_G0021880.1 mouse_genomes_project 15 91279272 91350144 - MGP_CBAJ_P0041662 1810041L15Rik protein_coding protein_coding MGP_CBAJ_T0041663.1 MGP_CBAJ_G0021880.1 mouse_genomes_project 15 91306172 91350209 - MGP_CBAJ_P0041663 1810041L15Rik protein_coding protein_coding MGP_CBAJ_T0041664.1 MGP_CBAJ_G0021880.1 mouse_genomes_project 15 91316934 91347141 - MGP_CBAJ_P0041664 1810041L15Rik protein_coding protein_coding MGP_CBAJ_T0041086.1 MGP_CBAJ_G0021710.1 mouse_genomes_project 15 82142933 82152246 + MGP_CBAJ_P0041086 Kifc2 protein_coding protein_coding MGP_CBAJ_T0012886.1 MGP_CBAJ_G0010998.1 mouse_genomes_project 15 2114998 2119067 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0040480.1 MGP_CBAJ_G0021524.1 mouse_genomes_project 15 40332273 40377032 + MGP_CBAJ_P0040480 Dcaf13 protein_coding protein_coding MGP_CBAJ_T0100189.1 MGP_CBAJ_G0038444.1 mouse_genomes_project 15 108412917 108413050 - Gm25999 snoRNA snoRNA MGP_CBAJ_T0042438.1 MGP_CBAJ_G0022131.1 mouse_genomes_project 15 112940474 112945710 + MGP_CBAJ_P0042438 Hoxc9 protein_coding protein_coding MGP_CBAJ_T0042439.1 MGP_CBAJ_G0022131.1 mouse_genomes_project 15 112941067 112949022 + MGP_CBAJ_P0042439 Hoxc9 protein_coding protein_coding MGP_CBAJ_T0042273.1 MGP_CBAJ_G0022068.1 mouse_genomes_project 15 110609588 110613792 - MGP_CBAJ_P0042273 Fignl2 protein_coding protein_coding MGP_CBAJ_T0041115.1 MGP_CBAJ_G0021718.1 mouse_genomes_project 15 82209753 82314586 - MGP_CBAJ_P0041115 Arhgap39 protein_coding protein_coding MGP_CBAJ_T0041116.1 MGP_CBAJ_G0021718.1 mouse_genomes_project 15 82209753 82314673 - MGP_CBAJ_P0041116 Arhgap39 protein_coding protein_coding MGP_CBAJ_T0041117.1 MGP_CBAJ_G0021718.1 mouse_genomes_project 15 82210628 82211372 - Arhgap39 protein_coding retained_intron MGP_CBAJ_T0041118.1 MGP_CBAJ_G0021718.1 mouse_genomes_project 15 82219190 82314632 - Arhgap39 protein_coding retained_intron MGP_CBAJ_T0041119.1 MGP_CBAJ_G0021718.1 mouse_genomes_project 15 82237352 82281388 - MGP_CBAJ_P0041119 Arhgap39 protein_coding protein_coding MGP_CBAJ_T0041120.1 MGP_CBAJ_G0021718.1 mouse_genomes_project 15 82246479 82314609 - MGP_CBAJ_P0041120 Arhgap39 protein_coding protein_coding MGP_CBAJ_T0041121.1 MGP_CBAJ_G0021718.1 mouse_genomes_project 15 82246483 82314499 - MGP_CBAJ_P0041121 Arhgap39 protein_coding protein_coding MGP_CBAJ_T0041122.1 MGP_CBAJ_G0021718.1 mouse_genomes_project 15 82253534 82314644 - Arhgap39 protein_coding retained_intron MGP_CBAJ_T0041123.1 MGP_CBAJ_G0021718.1 mouse_genomes_project 15 82253983 82314473 - MGP_CBAJ_P0041123 Arhgap39 protein_coding protein_coding MGP_CBAJ_T0041124.1 MGP_CBAJ_G0021718.1 mouse_genomes_project 15 82253999 82314579 - MGP_CBAJ_P0041124 Arhgap39 protein_coding protein_coding MGP_CBAJ_T0041839.1 MGP_CBAJ_G0021937.1 mouse_genomes_project 15 97089627 97102185 - MGP_CBAJ_P0041839 Cpt1b protein_coding protein_coding MGP_CBAJ_T0041840.1 MGP_CBAJ_G0021937.1 mouse_genomes_project 15 97091985 97097875 - MGP_CBAJ_P0041840 Cpt1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0041841.1 MGP_CBAJ_G0021937.1 mouse_genomes_project 15 97100114 97100822 - Cpt1b protein_coding retained_intron MGP_CBAJ_T0041842.1 MGP_CBAJ_G0021937.1 mouse_genomes_project 15 97101186 97102117 - MGP_CBAJ_P0041842 Cpt1b protein_coding protein_coding MGP_CBAJ_T0040737.1 MGP_CBAJ_G0021616.1 mouse_genomes_project 15 71495074 71569910 - MGP_CBAJ_P0040737 St3gal1 protein_coding unknown_likely_coding MGP_CBAJ_T0006658.1 MGP_CBAJ_G0005495.1 mouse_genomes_project 15 39561302 39562622 + Gm26863 lincRNA lincRNA MGP_CBAJ_T0011273.1 MGP_CBAJ_G0009411.1 mouse_genomes_project 15 112382479 112382661 + Gm27406 misc_RNA misc_RNA MGP_CBAJ_T0098911.1 MGP_CBAJ_G0037166.1 mouse_genomes_project 15 81625952 81626057 - Gm25720 snRNA snRNA MGP_CBAJ_T0098893.1 MGP_CBAJ_G0037148.1 mouse_genomes_project 15 49079745 49079807 - Gm23665 snRNA snRNA MGP_CBAJ_T0040743.1 MGP_CBAJ_G0021618.1 mouse_genomes_project 15 73473823 73648637 + MGP_CBAJ_P0040743 Khdrbs3 protein_coding protein_coding MGP_CBAJ_T0041349.1 MGP_CBAJ_G0021789.1 mouse_genomes_project 15 85831173 85849489 - MGP_CBAJ_P0041349 Nptxr protein_coding protein_coding MGP_CBAJ_T0041350.1 MGP_CBAJ_G0021789.1 mouse_genomes_project 15 85831174 85849546 - MGP_CBAJ_P0041350 Nptxr protein_coding protein_coding MGP_CBAJ_T0041351.1 MGP_CBAJ_G0021789.1 mouse_genomes_project 15 85834080 85835816 - Nptxr protein_coding processed_transcript MGP_CBAJ_T0017216.1 MGP_CBAJ_G0015047.1 mouse_genomes_project 15 87452147 87454143 + 4930483J18Rik processed_transcript processed_transcript MGP_CBAJ_T0017217.1 MGP_CBAJ_G0015047.1 mouse_genomes_project 15 87452226 87454136 + 4930483J18Rik processed_transcript processed_transcript MGP_CBAJ_T0041811.1 MGP_CBAJ_G0021927.1 mouse_genomes_project 15 96975455 96977212 + MGP_CBAJ_P0041811 Adm2 protein_coding protein_coding MGP_CBAJ_T0040563.1 MGP_CBAJ_G0021561.1 mouse_genomes_project 15 58171917 58228831 - MGP_CBAJ_P0040563 Taf2 protein_coding protein_coding MGP_CBAJ_T0042089.1 MGP_CBAJ_G0022016.1 mouse_genomes_project 15 107880695 107923461 - MGP_CBAJ_P0042089 Kmt2d protein_coding protein_coding MGP_CBAJ_T0042090.1 MGP_CBAJ_G0022016.1 mouse_genomes_project 15 107880695 107923612 - MGP_CBAJ_P0042090 Kmt2d protein_coding unknown_likely_coding MGP_CBAJ_T0042091.1 MGP_CBAJ_G0022016.1 mouse_genomes_project 15 107880699 107923478 - MGP_CBAJ_P0042091 Kmt2d protein_coding protein_coding MGP_CBAJ_T0042092.1 MGP_CBAJ_G0022016.1 mouse_genomes_project 15 107883335 107886155 - MGP_CBAJ_P0042092 Kmt2d protein_coding protein_coding MGP_CBAJ_T0042093.1 MGP_CBAJ_G0022016.1 mouse_genomes_project 15 107903917 107905513 - MGP_CBAJ_P0042093 Kmt2d protein_coding protein_coding MGP_CBAJ_T0040819.1 MGP_CBAJ_G0021644.1 mouse_genomes_project 15 79935977 79939090 - MGP_CBAJ_P0040819 Ly6k protein_coding protein_coding MGP_CBAJ_T0040820.1 MGP_CBAJ_G0021644.1 mouse_genomes_project 15 79935977 79938637 - MGP_CBAJ_P0040820 Ly6k protein_coding protein_coding MGP_CBAJ_T0042317.1 MGP_CBAJ_G0022096.1 mouse_genomes_project 15 111711670 111720654 - MGP_CBAJ_P0042317 Krt78 protein_coding protein_coding MGP_CBAJ_T0040911.1 MGP_CBAJ_G0021672.1 mouse_genomes_project 15 81325294 81330440 - MGP_CBAJ_P0040911 Tsta3 protein_coding unknown_likely_coding MGP_CBAJ_T0040345.1 MGP_CBAJ_G0021478.1 mouse_genomes_project 15 31897032 31915273 + MGP_CBAJ_P0040345 Cmbl protein_coding protein_coding MGP_CBAJ_T0040346.1 MGP_CBAJ_G0021478.1 mouse_genomes_project 15 31897146 31919058 + MGP_CBAJ_P0040346 Cmbl protein_coding protein_coding MGP_CBAJ_T0040347.1 MGP_CBAJ_G0021478.1 mouse_genomes_project 15 31900429 31912341 + MGP_CBAJ_P0040347 Cmbl protein_coding protein_coding MGP_CBAJ_T0040681.1 MGP_CBAJ_G0021603.1 mouse_genomes_project 15 68922078 69177919 - MGP_CBAJ_P0040681 Adcy8 protein_coding protein_coding MGP_CBAJ_T0100186.1 MGP_CBAJ_G0038441.1 mouse_genomes_project 15 107491914 107492052 - Snora34 snoRNA snoRNA MGP_CBAJ_T0041547.1 MGP_CBAJ_G0021841.1 mouse_genomes_project 15 88688583 88703582 + MGP_CBAJ_P0041547 1500009C09Rik protein_coding protein_coding MGP_CBAJ_T0041548.1 MGP_CBAJ_G0021841.1 mouse_genomes_project 15 88698856 88703597 + MGP_CBAJ_P0041548 1500009C09Rik protein_coding protein_coding MGP_CBAJ_T0041023.1 MGP_CBAJ_G0021695.1 mouse_genomes_project 15 81804166 81806662 + MGP_CBAJ_P0041023 Hgh1 protein_coding protein_coding MGP_CBAJ_T0009977.1 MGP_CBAJ_G0008115.1 mouse_genomes_project 15 111336620 111406838 + miRNA miRNA MGP_CBAJ_T0098922.1 MGP_CBAJ_G0037177.1 mouse_genomes_project 15 97836872 97836979 - Gm24415 snRNA snRNA MGP_CBAJ_T0100180.1 MGP_CBAJ_G0038435.1 mouse_genomes_project 15 81148844 81148975 + Gm23747 snoRNA snoRNA MGP_CBAJ_T0040416.1 MGP_CBAJ_G0021505.1 mouse_genomes_project 15 37368593 37387717 - MGP_CBAJ_P0040416 Ankrd46 protein_coding protein_coding MGP_CBAJ_T0040976.1 MGP_CBAJ_G0021688.1 mouse_genomes_project 15 81716840 81727314 - MGP_CBAJ_P0040976 Oplah protein_coding protein_coding MGP_CBAJ_T0040977.1 MGP_CBAJ_G0021688.1 mouse_genomes_project 15 81716846 81717736 - Oplah protein_coding retained_intron MGP_CBAJ_T0040978.1 MGP_CBAJ_G0021688.1 mouse_genomes_project 15 81716846 81727458 - MGP_CBAJ_P0040978 Oplah protein_coding protein_coding MGP_CBAJ_T0040979.1 MGP_CBAJ_G0021688.1 mouse_genomes_project 15 81717586 81718284 - Oplah protein_coding retained_intron MGP_CBAJ_T0040980.1 MGP_CBAJ_G0021688.1 mouse_genomes_project 15 81720830 81721359 - Oplah protein_coding retained_intron MGP_CBAJ_T0040981.1 MGP_CBAJ_G0021688.1 mouse_genomes_project 15 81721119 81722606 - Oplah protein_coding retained_intron MGP_CBAJ_T0040982.1 MGP_CBAJ_G0021688.1 mouse_genomes_project 15 81721197 81727602 - MGP_CBAJ_P0040982 Oplah protein_coding protein_coding MGP_CBAJ_T0040983.1 MGP_CBAJ_G0021688.1 mouse_genomes_project 15 81722307 81723444 - Oplah protein_coding processed_transcript MGP_CBAJ_T0040984.1 MGP_CBAJ_G0021688.1 mouse_genomes_project 15 81726699 81750330 - MGP_CBAJ_P0040984 Oplah protein_coding protein_coding MGP_CBAJ_T0041836.1 MGP_CBAJ_G0021935.1 mouse_genomes_project 15 97058959 97080943 - MGP_CBAJ_P0041836 Syce3 protein_coding protein_coding MGP_CBAJ_T0041837.1 MGP_CBAJ_G0021935.1 mouse_genomes_project 15 97058959 97081183 - MGP_CBAJ_P0041837 Syce3 protein_coding protein_coding MGP_CBAJ_T0006663.1 MGP_CBAJ_G0005500.1 mouse_genomes_project 15 44336314 44369496 + Gm17473 lincRNA lincRNA MGP_CBAJ_T0009916.1 MGP_CBAJ_G0008054.1 mouse_genomes_project 15 37484597 37484723 + Gm44310 miRNA miRNA MGP_CBAJ_T0042205.1 MGP_CBAJ_G0022051.1 mouse_genomes_project 15 109766100 109827842 + MGP_CBAJ_P0042205 Methig1 protein_coding protein_coding MGP_CBAJ_T0042206.1 MGP_CBAJ_G0022051.1 mouse_genomes_project 15 109766117 109827715 + MGP_CBAJ_P0042206 Methig1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0000906.1 MGP_CBAJ_G0000841.1 mouse_genomes_project 15 72798253 72808231 - TEC TEC MGP_CBAJ_T0098879.1 MGP_CBAJ_G0037134.1 mouse_genomes_project 15 2050321 2050424 + Gm25652 snRNA snRNA MGP_CBAJ_T0040635.1 MGP_CBAJ_G0021589.1 mouse_genomes_project 15 62437088 62489031 - MGP_CBAJ_P0040635 Tatdn1 protein_coding protein_coding MGP_CBAJ_T0040241.1 MGP_CBAJ_G0021440.1 mouse_genomes_project 15 8679223 8711291 + MGP_CBAJ_P0040241 Slc45a2 protein_coding protein_coding MGP_CBAJ_T0040608.1 MGP_CBAJ_G0021575.1 mouse_genomes_project 15 61469708 61483384 - MGP_CBAJ_P0040608 protein_coding unknown_likely_coding MGP_CBAJ_T0040609.1 MGP_CBAJ_G0021575.1 mouse_genomes_project 15 61471453 61477079 - protein_coding processed_transcript MGP_CBAJ_T0040611.1 MGP_CBAJ_G0021575.1 mouse_genomes_project 15 61477995 61483374 - MGP_CBAJ_P0040611 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040612.1 MGP_CBAJ_G0021575.1 mouse_genomes_project 15 61480139 61483509 - MGP_CBAJ_P0040612 protein_coding protein_coding MGP_CBAJ_T0040513.1 MGP_CBAJ_G0021541.1 mouse_genomes_project 15 46304844 46447949 + MGP_CBAJ_P0040513 protein_coding protein_coding MGP_CBAJ_T0040514.1 MGP_CBAJ_G0021541.1 mouse_genomes_project 15 46304844 46447955 + MGP_CBAJ_P0040514 protein_coding protein_coding MGP_CBAJ_T0040375.1 MGP_CBAJ_G0021489.1 mouse_genomes_project 15 34953709 34964087 - MGP_CBAJ_P0040375 9430069I07Rik protein_coding protein_coding MGP_CBAJ_T0041153.1 MGP_CBAJ_G0021730.1 mouse_genomes_project 15 83266041 83271315 + MGP_CBAJ_P0041153 1700025B11Rik protein_coding protein_coding MGP_CBAJ_T0042298.1 MGP_CBAJ_G0022078.1 mouse_genomes_project 15 111095770 111102157 + MGP_CBAJ_P0042298 Krt88 protein_coding protein_coding MGP_CBAJ_T0101660.1 MGP_CBAJ_G0039691.1 mouse_genomes_project 15 80598209 80601744 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0041693.1 MGP_CBAJ_G0021896.1 mouse_genomes_project 15 92866725 92918018 + Ppara protein_coding processed_transcript MGP_CBAJ_T0041694.1 MGP_CBAJ_G0021896.1 mouse_genomes_project 15 92867306 92956765 + MGP_CBAJ_P0041694 Ppara protein_coding protein_coding MGP_CBAJ_T0041695.1 MGP_CBAJ_G0021896.1 mouse_genomes_project 15 92867381 92918113 + Ppara protein_coding processed_transcript MGP_CBAJ_T0041696.1 MGP_CBAJ_G0021896.1 mouse_genomes_project 15 92867518 92957426 + MGP_CBAJ_P0041696 Ppara protein_coding protein_coding MGP_CBAJ_T0041697.1 MGP_CBAJ_G0021896.1 mouse_genomes_project 15 92867873 92956350 + MGP_CBAJ_P0041697 Ppara protein_coding protein_coding MGP_CBAJ_T0041698.1 MGP_CBAJ_G0021896.1 mouse_genomes_project 15 92912602 92918153 + Ppara protein_coding processed_transcript MGP_CBAJ_T0041608.1 MGP_CBAJ_G0021863.1 mouse_genomes_project 15 89887831 89917427 - MGP_CBAJ_P0041608 A4galt protein_coding protein_coding MGP_CBAJ_T0041609.1 MGP_CBAJ_G0021863.1 mouse_genomes_project 15 89887831 89917384 - MGP_CBAJ_P0041609 A4galt protein_coding protein_coding MGP_CBAJ_T0098928.1 MGP_CBAJ_G0037183.1 mouse_genomes_project 15 109232398 109232533 - Gm23133 snRNA snRNA MGP_CBAJ_T0040614.1 MGP_CBAJ_G0021577.1 mouse_genomes_project 15 61497550 61526445 - MGP_CBAJ_P0040614 Zhx1 protein_coding protein_coding MGP_CBAJ_T0040615.1 MGP_CBAJ_G0021577.1 mouse_genomes_project 15 61497550 61526689 - MGP_CBAJ_P0040615 Zhx1 protein_coding protein_coding MGP_CBAJ_T0040616.1 MGP_CBAJ_G0021577.1 mouse_genomes_project 15 61497852 61526669 - MGP_CBAJ_P0040616 Zhx1 protein_coding protein_coding MGP_CBAJ_T0040619.1 MGP_CBAJ_G0021577.1 mouse_genomes_project 15 61503527 61526414 - MGP_CBAJ_P0040619 Zhx1 protein_coding protein_coding MGP_CBAJ_T0040620.1 MGP_CBAJ_G0021577.1 mouse_genomes_project 15 61505461 61526563 - Zhx1 protein_coding retained_intron MGP_CBAJ_T0040621.1 MGP_CBAJ_G0021577.1 mouse_genomes_project 15 61518859 61526741 - Zhx1 protein_coding retained_intron MGP_CBAJ_T0003556.1 MGP_CBAJ_G0003222.1 mouse_genomes_project 15 107577918 107579017 + Gm29331 antisense antisense MGP_CBAJ_T0041156.1 MGP_CBAJ_G0021733.1 mouse_genomes_project 15 83419581 83427290 + MGP_CBAJ_P0041156 Apol9a protein_coding protein_coding MGP_CBAJ_T0041908.1 MGP_CBAJ_G0021953.1 mouse_genomes_project 15 100094344 100332222 + Cntn1 protein_coding retained_intron MGP_CBAJ_T0041909.1 MGP_CBAJ_G0021953.1 mouse_genomes_project 15 100094344 100449188 + MGP_CBAJ_P0041909 Cntn1 protein_coding protein_coding MGP_CBAJ_T0041910.1 MGP_CBAJ_G0021953.1 mouse_genomes_project 15 100175452 100449175 + MGP_CBAJ_P0041910 Cntn1 protein_coding protein_coding MGP_CBAJ_T0041911.1 MGP_CBAJ_G0021953.1 mouse_genomes_project 15 100214174 100447338 + MGP_CBAJ_P0041911 Cntn1 protein_coding protein_coding MGP_CBAJ_T0012907.1 MGP_CBAJ_G0011019.1 mouse_genomes_project 15 42635545 42635716 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0040411.1 MGP_CBAJ_G0021501.1 mouse_genomes_project 15 36994399 37009215 - MGP_CBAJ_P0040411 Fbxo43 protein_coding protein_coding MGP_CBAJ_T0101051.1 MGP_CBAJ_G0039274.1 mouse_genomes_project 15 85189609 85190126 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0041879.1 MGP_CBAJ_G0021945.1 mouse_genomes_project 15 98023027 98029271 + MGP_CBAJ_P0041879 Alg10b protein_coding protein_coding MGP_CBAJ_T0040757.1 MGP_CBAJ_G0021624.1 mouse_genomes_project 15 78050892 78146641 - MGP_CBAJ_P0040757 Ago2 protein_coding protein_coding MGP_CBAJ_T0042310.1 MGP_CBAJ_G0022089.1 mouse_genomes_project 15 111543877 111552887 - MGP_CBAJ_P0042310 Krt73 protein_coding protein_coding MGP_CBAJ_T0040550.1 MGP_CBAJ_G0021554.1 mouse_genomes_project 15 56491785 56985413 - Samd12 protein_coding processed_transcript MGP_CBAJ_T0040551.1 MGP_CBAJ_G0021554.1 mouse_genomes_project 15 56491965 56985406 - MGP_CBAJ_P0040551 Samd12 protein_coding protein_coding MGP_CBAJ_T0040552.1 MGP_CBAJ_G0021554.1 mouse_genomes_project 15 56492358 56985257 - MGP_CBAJ_P0040552 Samd12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040553.1 MGP_CBAJ_G0021554.1 mouse_genomes_project 15 56896099 56985413 - Samd12 protein_coding processed_transcript MGP_CBAJ_T0006650.1 MGP_CBAJ_G0005488.1 mouse_genomes_project 15 16869158 16985203 - 4921515E04Rik lincRNA lincRNA MGP_CBAJ_T0011269.1 MGP_CBAJ_G0009407.1 mouse_genomes_project 15 99553184 99553470 - Gm25389 misc_RNA misc_RNA MGP_CBAJ_T0040776.1 MGP_CBAJ_G0021629.1 mouse_genomes_project 15 78763046 78801576 + MGP_CBAJ_P0040776 Ptp4a3 protein_coding protein_coding MGP_CBAJ_T0040777.1 MGP_CBAJ_G0021629.1 mouse_genomes_project 15 78763046 78801576 + MGP_CBAJ_P0040777 Ptp4a3 protein_coding protein_coding MGP_CBAJ_T0040778.1 MGP_CBAJ_G0021629.1 mouse_genomes_project 15 78764832 78801576 + MGP_CBAJ_P0040778 Ptp4a3 protein_coding protein_coding MGP_CBAJ_T0040779.1 MGP_CBAJ_G0021629.1 mouse_genomes_project 15 78790835 78801576 + MGP_CBAJ_P0040779 Ptp4a3 protein_coding protein_coding MGP_CBAJ_T0017213.1 MGP_CBAJ_G0015044.1 mouse_genomes_project 15 83865704 83890149 + A730060N03Rik processed_transcript processed_transcript MGP_CBAJ_T0041147.1 MGP_CBAJ_G0021728.1 mouse_genomes_project 15 82975221 82983496 - MGP_CBAJ_P0041147 Apol7a protein_coding protein_coding MGP_CBAJ_T0041148.1 MGP_CBAJ_G0021728.1 mouse_genomes_project 15 82975222 82983307 - MGP_CBAJ_P0041148 Apol7a protein_coding protein_coding MGP_CBAJ_T0041149.1 MGP_CBAJ_G0021728.1 mouse_genomes_project 15 82975957 82983448 - MGP_CBAJ_P0041149 Apol7a protein_coding protein_coding MGP_CBAJ_T0041150.1 MGP_CBAJ_G0021728.1 mouse_genomes_project 15 82980253 82998096 - MGP_CBAJ_P0041150 Apol7a protein_coding protein_coding MGP_CBAJ_T0041151.1 MGP_CBAJ_G0021728.1 mouse_genomes_project 15 82980323 82983924 - Apol7a protein_coding retained_intron MGP_CBAJ_T0006665.1 MGP_CBAJ_G0005502.1 mouse_genomes_project 15 46642171 46655822 + 2310069G16Rik lincRNA lincRNA MGP_CBAJ_T0009951.1 MGP_CBAJ_G0008089.1 mouse_genomes_project 15 89113204 89113264 + Gm27924 miRNA miRNA MGP_CBAJ_T0042481.1 MGP_CBAJ_G0022148.1 mouse_genomes_project 15 113585651 113587968 - MGP_CBAJ_P0042481 Glycam1 protein_coding protein_coding MGP_CBAJ_T0012937.1 MGP_CBAJ_G0011049.1 mouse_genomes_project 15 99478383 99479539 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0041812.1 MGP_CBAJ_G0021928.1 mouse_genomes_project 15 96994804 96997422 + MGP_CBAJ_P0041812 Miox protein_coding protein_coding MGP_CBAJ_T0041813.1 MGP_CBAJ_G0021928.1 mouse_genomes_project 15 96994867 96996531 + Miox protein_coding retained_intron MGP_CBAJ_T0041814.1 MGP_CBAJ_G0021928.1 mouse_genomes_project 15 96995046 96997042 + Miox protein_coding retained_intron MGP_CBAJ_T0041815.1 MGP_CBAJ_G0021928.1 mouse_genomes_project 15 96995336 96996819 + MGP_CBAJ_P0041815 Miox protein_coding nonsense_mediated_decay MGP_CBAJ_T0041816.1 MGP_CBAJ_G0021928.1 mouse_genomes_project 15 96995337 96996821 + Miox protein_coding retained_intron MGP_CBAJ_T0041817.1 MGP_CBAJ_G0021928.1 mouse_genomes_project 15 96996839 96997418 + MGP_CBAJ_P0041817 Miox protein_coding protein_coding MGP_CBAJ_T0041666.1 MGP_CBAJ_G0021882.1 mouse_genomes_project 15 91626511 91652914 + MGP_CBAJ_P0041666 Prr5 protein_coding protein_coding MGP_CBAJ_T0041325.1 MGP_CBAJ_G0021781.1 mouse_genomes_project 15 85569066 85623440 - MGP_CBAJ_P0041325 Dmc1 protein_coding protein_coding MGP_CBAJ_T0040754.1 MGP_CBAJ_G0021623.1 mouse_genomes_project 15 78045453 78049129 + MGP_CBAJ_P0040754 Chrac1 protein_coding protein_coding MGP_CBAJ_T0040755.1 MGP_CBAJ_G0021623.1 mouse_genomes_project 15 78045453 78052603 + MGP_CBAJ_P0040755 Chrac1 protein_coding protein_coding MGP_CBAJ_T0040756.1 MGP_CBAJ_G0021623.1 mouse_genomes_project 15 78045473 78049828 + Chrac1 protein_coding retained_intron MGP_CBAJ_T0006660.1 MGP_CBAJ_G0005497.1 mouse_genomes_project 15 39940907 40201693 - lincRNA lincRNA MGP_CBAJ_T0042223.1 MGP_CBAJ_G0022060.1 mouse_genomes_project 15 110032921 110071243 - MGP_CBAJ_P0042223 Pou6f1 protein_coding protein_coding MGP_CBAJ_T0042224.1 MGP_CBAJ_G0022060.1 mouse_genomes_project 15 110032921 110043068 - MGP_CBAJ_P0042224 Pou6f1 protein_coding protein_coding MGP_CBAJ_T0042225.1 MGP_CBAJ_G0022060.1 mouse_genomes_project 15 110032923 110071344 - MGP_CBAJ_P0042225 Pou6f1 protein_coding protein_coding MGP_CBAJ_T0042226.1 MGP_CBAJ_G0022060.1 mouse_genomes_project 15 110032923 110048661 - MGP_CBAJ_P0042226 Pou6f1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042227.1 MGP_CBAJ_G0022060.1 mouse_genomes_project 15 110032926 110037731 - Pou6f1 protein_coding retained_intron MGP_CBAJ_T0042228.1 MGP_CBAJ_G0022060.1 mouse_genomes_project 15 110035837 110051769 - MGP_CBAJ_P0042228 Pou6f1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042229.1 MGP_CBAJ_G0022060.1 mouse_genomes_project 15 110035837 110051769 - MGP_CBAJ_P0042229 Pou6f1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042230.1 MGP_CBAJ_G0022060.1 mouse_genomes_project 15 110042993 110048764 - Pou6f1 protein_coding retained_intron MGP_CBAJ_T0042231.1 MGP_CBAJ_G0022060.1 mouse_genomes_project 15 110043318 110071224 - Pou6f1 protein_coding processed_transcript MGP_CBAJ_T0042232.1 MGP_CBAJ_G0022060.1 mouse_genomes_project 15 110045328 110071224 - Pou6f1 protein_coding processed_transcript MGP_CBAJ_T0041046.1 MGP_CBAJ_G0021701.1 mouse_genomes_project 15 81954630 81964538 - MGP_CBAJ_P0041046 Dgat1 protein_coding protein_coding MGP_CBAJ_T0041047.1 MGP_CBAJ_G0021701.1 mouse_genomes_project 15 81954632 81955796 - Dgat1 protein_coding retained_intron MGP_CBAJ_T0041048.1 MGP_CBAJ_G0021701.1 mouse_genomes_project 15 81954683 81955930 - Dgat1 protein_coding retained_intron MGP_CBAJ_T0041049.1 MGP_CBAJ_G0021701.1 mouse_genomes_project 15 81955139 81956561 - MGP_CBAJ_P0041049 Dgat1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041050.1 MGP_CBAJ_G0021701.1 mouse_genomes_project 15 81955891 81959221 - MGP_CBAJ_P0041050 Dgat1 protein_coding protein_coding MGP_CBAJ_T0041051.1 MGP_CBAJ_G0021701.1 mouse_genomes_project 15 81956206 81956938 - Dgat1 protein_coding retained_intron MGP_CBAJ_T0041052.1 MGP_CBAJ_G0021701.1 mouse_genomes_project 15 81956517 81957811 - Dgat1 protein_coding retained_intron MGP_CBAJ_T0041053.1 MGP_CBAJ_G0021701.1 mouse_genomes_project 15 81956567 81957279 - Dgat1 protein_coding retained_intron MGP_CBAJ_T0041932.1 MGP_CBAJ_G0021960.1 mouse_genomes_project 15 102573402 102722454 - MGP_CBAJ_P0041932 Adamts20 protein_coding protein_coding MGP_CBAJ_T0041933.1 MGP_CBAJ_G0021960.1 mouse_genomes_project 15 102624061 102722454 - MGP_CBAJ_P0041933 Adamts20 protein_coding protein_coding MGP_CBAJ_T0041934.1 MGP_CBAJ_G0021960.1 mouse_genomes_project 15 102666567 102722546 - Adamts20 protein_coding retained_intron MGP_CBAJ_T0041935.1 MGP_CBAJ_G0021960.1 mouse_genomes_project 15 102712929 102785233 - Adamts20 protein_coding processed_transcript MGP_CBAJ_T0040971.1 MGP_CBAJ_G0021686.1 mouse_genomes_project 15 81683980 81709416 + MGP_CBAJ_P0040971 Spatc1 protein_coding protein_coding MGP_CBAJ_T0006690.1 MGP_CBAJ_G0005515.1 mouse_genomes_project 15 89611745 89616781 - Gm29019 lincRNA lincRNA MGP_CBAJ_T0006691.1 MGP_CBAJ_G0005515.1 mouse_genomes_project 15 89611803 89616662 - Gm29019 lincRNA lincRNA MGP_CBAJ_T0041057.1 MGP_CBAJ_G0021704.1 mouse_genomes_project 15 81999292 82002480 + MGP_CBAJ_P0041057 Slc52a2 protein_coding protein_coding MGP_CBAJ_T0009930.1 MGP_CBAJ_G0008068.1 mouse_genomes_project 15 81472323 81472384 - Mir6952 miRNA miRNA MGP_CBAJ_T0040554.1 MGP_CBAJ_G0021555.1 mouse_genomes_project 15 56967781 56969473 + MGP_CBAJ_P0040554 Gm7489 protein_coding protein_coding MGP_CBAJ_T0012905.1 MGP_CBAJ_G0011017.1 mouse_genomes_project 15 40411594 40412525 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009911.1 MGP_CBAJ_G0008049.1 mouse_genomes_project 15 27473028 27473093 + Mir7117 miRNA miRNA MGP_CBAJ_T0011271.1 MGP_CBAJ_G0009409.1 mouse_genomes_project 15 106748779 106749090 + Gm22202 misc_RNA misc_RNA MGP_CBAJ_T0040399.1 MGP_CBAJ_G0021497.1 mouse_genomes_project 15 36008845 36016049 + MGP_CBAJ_P0040399 Osr2 protein_coding protein_coding MGP_CBAJ_T0098886.1 MGP_CBAJ_G0037141.1 mouse_genomes_project 15 30807423 30807486 + Gm24487 snRNA snRNA MGP_CBAJ_T0040886.1 MGP_CBAJ_G0021665.1 mouse_genomes_project 15 81142768 81231264 - MGP_CBAJ_P0040886 Zc3h3 protein_coding unknown_likely_coding MGP_CBAJ_T0040887.1 MGP_CBAJ_G0021665.1 mouse_genomes_project 15 81142774 81231284 - MGP_CBAJ_P0040887 Zc3h3 protein_coding protein_coding MGP_CBAJ_T0041160.1 MGP_CBAJ_G0021735.1 mouse_genomes_project 15 83460806 83513981 - MGP_CBAJ_P0041160 protein_coding unknown_likely_coding MGP_CBAJ_T0041161.1 MGP_CBAJ_G0021735.1 mouse_genomes_project 15 83465535 83467398 - protein_coding retained_intron MGP_CBAJ_T0041162.1 MGP_CBAJ_G0021735.1 mouse_genomes_project 15 83488390 83549234 - protein_coding retained_intron MGP_CBAJ_T0041163.1 MGP_CBAJ_G0021735.1 mouse_genomes_project 15 83490421 83549283 - protein_coding retained_intron MGP_CBAJ_T0041164.1 MGP_CBAJ_G0021735.1 mouse_genomes_project 15 83490937 83549225 - MGP_CBAJ_P0041164 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041165.1 MGP_CBAJ_G0021735.1 mouse_genomes_project 15 83494848 83513396 - protein_coding processed_transcript MGP_CBAJ_T0041166.1 MGP_CBAJ_G0021735.1 mouse_genomes_project 15 83505740 83549283 - protein_coding retained_intron MGP_CBAJ_T0012888.1 MGP_CBAJ_G0011000.1 mouse_genomes_project 15 4606253 4606856 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012933.1 MGP_CBAJ_G0011045.1 mouse_genomes_project 15 92114001 92114419 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0040574.1 MGP_CBAJ_G0021565.1 mouse_genomes_project 15 58483181 58711047 + MGP_CBAJ_P0040574 Col14a1 protein_coding protein_coding MGP_CBAJ_T0040575.1 MGP_CBAJ_G0021565.1 mouse_genomes_project 15 58483181 58711046 + MGP_CBAJ_P0040575 Col14a1 protein_coding protein_coding MGP_CBAJ_T0040576.1 MGP_CBAJ_G0021565.1 mouse_genomes_project 15 58483182 58711045 + MGP_CBAJ_P0040576 Col14a1 protein_coding protein_coding MGP_CBAJ_T0040577.1 MGP_CBAJ_G0021565.1 mouse_genomes_project 15 58631677 58709933 + MGP_CBAJ_P0040577 Col14a1 protein_coding protein_coding MGP_CBAJ_T0041182.1 MGP_CBAJ_G0021741.1 mouse_genomes_project 15 83940287 83953433 - MGP_CBAJ_P0041182 Pvalb protein_coding protein_coding MGP_CBAJ_T0041183.1 MGP_CBAJ_G0021741.1 mouse_genomes_project 15 83940290 83955596 - MGP_CBAJ_P0041183 Pvalb protein_coding protein_coding MGP_CBAJ_T0040846.1 MGP_CBAJ_G0021652.1 mouse_genomes_project 15 80417685 80420112 + MGP_CBAJ_P0040846 Ly6g protein_coding protein_coding MGP_CBAJ_T0042171.1 MGP_CBAJ_G0022040.1 mouse_genomes_project 15 108953969 108954256 - MGP_CBAJ_P0042171 Gm17349 protein_coding protein_coding MGP_CBAJ_T0040327.1 MGP_CBAJ_G0021468.1 mouse_genomes_project 15 27509280 27534049 - MGP_CBAJ_P0040327 Otulin protein_coding protein_coding MGP_CBAJ_T0042454.1 MGP_CBAJ_G0022138.1 mouse_genomes_project 15 113244056 113251238 - MGP_CBAJ_P0042454 Nfe2 protein_coding protein_coding MGP_CBAJ_T0042455.1 MGP_CBAJ_G0022138.1 mouse_genomes_project 15 113244061 113247274 - MGP_CBAJ_P0042455 Nfe2 protein_coding protein_coding MGP_CBAJ_T0042456.1 MGP_CBAJ_G0022138.1 mouse_genomes_project 15 113244061 113247325 - MGP_CBAJ_P0042456 Nfe2 protein_coding protein_coding MGP_CBAJ_T0042457.1 MGP_CBAJ_G0022138.1 mouse_genomes_project 15 113244064 113247485 - MGP_CBAJ_P0042457 Nfe2 protein_coding protein_coding MGP_CBAJ_T0042458.1 MGP_CBAJ_G0022138.1 mouse_genomes_project 15 113244119 113247324 - MGP_CBAJ_P0042458 Nfe2 protein_coding protein_coding MGP_CBAJ_T0042459.1 MGP_CBAJ_G0022138.1 mouse_genomes_project 15 113244797 113248961 - MGP_CBAJ_P0042459 Nfe2 protein_coding protein_coding MGP_CBAJ_T0042460.1 MGP_CBAJ_G0022138.1 mouse_genomes_project 15 113244849 113249861 - MGP_CBAJ_P0042460 Nfe2 protein_coding protein_coding MGP_CBAJ_T0042461.1 MGP_CBAJ_G0022138.1 mouse_genomes_project 15 113244911 113247496 - MGP_CBAJ_P0042461 Nfe2 protein_coding protein_coding MGP_CBAJ_T0042462.1 MGP_CBAJ_G0022138.1 mouse_genomes_project 15 113245081 113248619 - MGP_CBAJ_P0042462 Nfe2 protein_coding protein_coding MGP_CBAJ_T0042463.1 MGP_CBAJ_G0022138.1 mouse_genomes_project 15 113245191 113254198 - MGP_CBAJ_P0042463 Nfe2 protein_coding protein_coding MGP_CBAJ_T0040704.1 MGP_CBAJ_G0021609.1 mouse_genomes_project 15 70718124 70845521 - MGP_CBAJ_P0040704 Lrrc6 protein_coding protein_coding MGP_CBAJ_T0041888.1 MGP_CBAJ_G0021948.1 mouse_genomes_project 15 99012822 99067270 - MGP_CBAJ_P0041888 Abcd2 protein_coding protein_coding MGP_CBAJ_T0042144.1 MGP_CBAJ_G0022032.1 mouse_genomes_project 15 108603211 108618978 - MGP_CBAJ_P0042144 protein_coding unknown_likely_coding MGP_CBAJ_T0042145.1 MGP_CBAJ_G0022032.1 mouse_genomes_project 15 108604127 108605050 - MGP_CBAJ_P0042145 protein_coding protein_coding MGP_CBAJ_T0042146.1 MGP_CBAJ_G0022032.1 mouse_genomes_project 15 108604527 108605046 - protein_coding processed_transcript MGP_CBAJ_T0042147.1 MGP_CBAJ_G0022032.1 mouse_genomes_project 15 108609947 108645662 - MGP_CBAJ_P0042147 protein_coding protein_coding MGP_CBAJ_T0006719.1 MGP_CBAJ_G0005534.1 mouse_genomes_project 15 112908249 112911918 - Hotair lincRNA lincRNA MGP_CBAJ_T0042115.1 MGP_CBAJ_G0022029.1 mouse_genomes_project 15 108459545 108470443 + MGP_CBAJ_P0042115 Prpf40b protein_coding protein_coding MGP_CBAJ_T0042116.1 MGP_CBAJ_G0022029.1 mouse_genomes_project 15 108459697 108481496 + Prpf40b protein_coding retained_intron MGP_CBAJ_T0042117.1 MGP_CBAJ_G0022029.1 mouse_genomes_project 15 108459699 108480592 + Prpf40b protein_coding retained_intron MGP_CBAJ_T0042118.1 MGP_CBAJ_G0022029.1 mouse_genomes_project 15 108459699 108480592 + Prpf40b protein_coding retained_intron MGP_CBAJ_T0042119.1 MGP_CBAJ_G0022029.1 mouse_genomes_project 15 108459702 108471555 + MGP_CBAJ_P0042119 Prpf40b protein_coding nonsense_mediated_decay MGP_CBAJ_T0042120.1 MGP_CBAJ_G0022029.1 mouse_genomes_project 15 108459729 108481496 + MGP_CBAJ_P0042120 Prpf40b protein_coding protein_coding MGP_CBAJ_T0042121.1 MGP_CBAJ_G0022029.1 mouse_genomes_project 15 108460368 108481488 + MGP_CBAJ_P0042121 Prpf40b protein_coding protein_coding MGP_CBAJ_T0042122.1 MGP_CBAJ_G0022029.1 mouse_genomes_project 15 108467756 108480977 + MGP_CBAJ_P0042122 Prpf40b protein_coding protein_coding MGP_CBAJ_T0042123.1 MGP_CBAJ_G0022029.1 mouse_genomes_project 15 108467757 108481485 + MGP_CBAJ_P0042123 Prpf40b protein_coding protein_coding MGP_CBAJ_T0042124.1 MGP_CBAJ_G0022029.1 mouse_genomes_project 15 108472362 108479571 + Prpf40b protein_coding retained_intron MGP_CBAJ_T0042125.1 MGP_CBAJ_G0022029.1 mouse_genomes_project 15 108474380 108480368 + Prpf40b protein_coding retained_intron MGP_CBAJ_T0042126.1 MGP_CBAJ_G0022029.1 mouse_genomes_project 15 108479345 108480272 + Prpf40b protein_coding retained_intron MGP_CBAJ_T0042127.1 MGP_CBAJ_G0022029.1 mouse_genomes_project 15 108479354 108481149 + MGP_CBAJ_P0042127 Prpf40b protein_coding protein_coding MGP_CBAJ_T0042128.1 MGP_CBAJ_G0022029.1 mouse_genomes_project 15 108479383 108481291 + MGP_CBAJ_P0042128 Prpf40b protein_coding protein_coding MGP_CBAJ_T0042129.1 MGP_CBAJ_G0022029.1 mouse_genomes_project 15 108480017 108481488 + MGP_CBAJ_P0042129 Prpf40b protein_coding protein_coding MGP_CBAJ_T0041391.1 MGP_CBAJ_G0021799.1 mouse_genomes_project 15 86379582 86403040 + MGP_CBAJ_P0041391 Mief1 protein_coding protein_coding MGP_CBAJ_T0041392.1 MGP_CBAJ_G0021799.1 mouse_genomes_project 15 86379610 86400212 + MGP_CBAJ_P0041392 Mief1 protein_coding protein_coding MGP_CBAJ_T0041276.1 MGP_CBAJ_G0021771.1 mouse_genomes_project 15 85160181 85183517 + MGP_CBAJ_P0041276 Pick1 protein_coding protein_coding MGP_CBAJ_T0041277.1 MGP_CBAJ_G0021771.1 mouse_genomes_project 15 85160390 85183499 + MGP_CBAJ_P0041277 Pick1 protein_coding protein_coding MGP_CBAJ_T0041278.1 MGP_CBAJ_G0021771.1 mouse_genomes_project 15 85160399 85190701 + MGP_CBAJ_P0041278 Pick1 protein_coding protein_coding MGP_CBAJ_T0041279.1 MGP_CBAJ_G0021771.1 mouse_genomes_project 15 85160419 85181995 + Pick1 protein_coding retained_intron MGP_CBAJ_T0041280.1 MGP_CBAJ_G0021771.1 mouse_genomes_project 15 85160424 85181995 + Pick1 protein_coding retained_intron MGP_CBAJ_T0041281.1 MGP_CBAJ_G0021771.1 mouse_genomes_project 15 85160466 85165305 + Pick1 protein_coding processed_transcript MGP_CBAJ_T0041282.1 MGP_CBAJ_G0021771.1 mouse_genomes_project 15 85160513 85172542 + Pick1 protein_coding retained_intron MGP_CBAJ_T0041283.1 MGP_CBAJ_G0021771.1 mouse_genomes_project 15 85160711 85183362 + MGP_CBAJ_P0041283 Pick1 protein_coding protein_coding MGP_CBAJ_T0041284.1 MGP_CBAJ_G0021771.1 mouse_genomes_project 15 85174081 85181800 + Pick1 protein_coding processed_transcript MGP_CBAJ_T0041285.1 MGP_CBAJ_G0021771.1 mouse_genomes_project 15 85179040 85181768 + Pick1 protein_coding processed_transcript MGP_CBAJ_T0041286.1 MGP_CBAJ_G0021771.1 mouse_genomes_project 15 85179437 85181864 + Pick1 protein_coding processed_transcript MGP_CBAJ_T0041287.1 MGP_CBAJ_G0021771.1 mouse_genomes_project 15 85180502 85183499 + Pick1 protein_coding processed_transcript MGP_CBAJ_T0011266.1 MGP_CBAJ_G0009404.1 mouse_genomes_project 15 81683026 81683311 - Mirt2 misc_RNA misc_RNA MGP_CBAJ_T0040328.1 MGP_CBAJ_G0021469.1 mouse_genomes_project 15 27558380 27584805 - MGP_CBAJ_P0040328 Fam105a protein_coding protein_coding MGP_CBAJ_T0040329.1 MGP_CBAJ_G0021469.1 mouse_genomes_project 15 27560207 27584714 - MGP_CBAJ_P0040329 Fam105a protein_coding unknown_likely_coding MGP_CBAJ_T0040889.1 MGP_CBAJ_G0021667.1 mouse_genomes_project 15 81284699 81289333 - MGP_CBAJ_P0040889 Mroh6 protein_coding protein_coding MGP_CBAJ_T0040648.1 MGP_CBAJ_G0021596.1 mouse_genomes_project 15 63730977 63732730 - MGP_CBAJ_P0040648 4933412E24Rik protein_coding protein_coding MGP_CBAJ_T0042314.1 MGP_CBAJ_G0022093.1 mouse_genomes_project 15 111640980 111649554 - MGP_CBAJ_P0042314 Krt76 protein_coding protein_coding MGP_CBAJ_T0101653.1 MGP_CBAJ_G0039684.1 mouse_genomes_project 15 80120819 80120970 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0041562.1 MGP_CBAJ_G0021847.1 mouse_genomes_project 15 88813922 88818069 - MGP_CBAJ_P0041562 Ndufa6 protein_coding protein_coding MGP_CBAJ_T0017200.1 MGP_CBAJ_G0015036.1 mouse_genomes_project 15 61676145 61798547 + Gm15943 processed_transcript processed_transcript MGP_CBAJ_T0003553.1 MGP_CBAJ_G0003219.1 mouse_genomes_project 15 106572368 106574530 + Rapgef3os2 antisense antisense MGP_CBAJ_T0040643.1 MGP_CBAJ_G0021593.1 mouse_genomes_project 15 62940322 62985162 - MGP_CBAJ_P0040643 E430025E21Rik protein_coding protein_coding MGP_CBAJ_T0040412.1 MGP_CBAJ_G0021502.1 mouse_genomes_project 15 37021009 37024000 + MGP_CBAJ_P0040412 Polr2k protein_coding protein_coding MGP_CBAJ_T0040413.1 MGP_CBAJ_G0021502.1 mouse_genomes_project 15 37021032 37024003 + MGP_CBAJ_P0040413 Polr2k protein_coding protein_coding MGP_CBAJ_T0009907.1 MGP_CBAJ_G0008045.1 mouse_genomes_project 15 12927368 12927600 - Gm24080 miRNA miRNA MGP_CBAJ_T0041274.1 MGP_CBAJ_G0021769.1 mouse_genomes_project 15 85069640 85079400 + MGP_CBAJ_P0041274 Polr2f protein_coding protein_coding MGP_CBAJ_T0040808.1 MGP_CBAJ_G0021638.1 mouse_genomes_project 15 79856686 79860403 - MGP_CBAJ_P0040808 Slurp1 protein_coding protein_coding MGP_CBAJ_T0040809.1 MGP_CBAJ_G0021638.1 mouse_genomes_project 15 79859032 79860383 - MGP_CBAJ_P0040809 Slurp1 protein_coding protein_coding MGP_CBAJ_T0100168.1 MGP_CBAJ_G0038423.1 mouse_genomes_project 15 50052422 50052559 + Gm23530 snoRNA snoRNA MGP_CBAJ_T0009912.1 MGP_CBAJ_G0008050.1 mouse_genomes_project 15 29814457 29814531 - Mir3964 miRNA miRNA MGP_CBAJ_T0041382.1 MGP_CBAJ_G0021795.1 mouse_genomes_project 15 86186130 86189385 - MGP_CBAJ_P0041382 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041383.1 MGP_CBAJ_G0021795.1 mouse_genomes_project 15 86186130 86208347 - MGP_CBAJ_P0041383 protein_coding protein_coding MGP_CBAJ_T0041384.1 MGP_CBAJ_G0021795.1 mouse_genomes_project 15 86187217 86189389 - protein_coding retained_intron MGP_CBAJ_T0040622.1 MGP_CBAJ_G0021578.1 mouse_genomes_project 15 61547036 61590107 - MGP_CBAJ_P0040622 Atad2 protein_coding protein_coding MGP_CBAJ_T0009927.1 MGP_CBAJ_G0008065.1 mouse_genomes_project 15 72821263 72821345 - Mir30d miRNA miRNA MGP_CBAJ_T0042479.1 MGP_CBAJ_G0022146.1 mouse_genomes_project 15 113522036 113548771 + MGP_CBAJ_P0042479 Pde1b protein_coding protein_coding MGP_CBAJ_T0041619.1 MGP_CBAJ_G0021868.1 mouse_genomes_project 15 90271258 90280299 - MGP_CBAJ_P0041619 Mcat protein_coding protein_coding MGP_CBAJ_T0012899.1 MGP_CBAJ_G0011011.1 mouse_genomes_project 15 36961813 36962742 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0041158.1 MGP_CBAJ_G0021734.1 mouse_genomes_project 15 83441011 83446277 - MGP_CBAJ_P0041158 Apol8 protein_coding protein_coding MGP_CBAJ_T0041159.1 MGP_CBAJ_G0021734.1 mouse_genomes_project 15 83441825 83448430 - MGP_CBAJ_P0041159 Apol8 protein_coding protein_coding MGP_CBAJ_T0101661.1 MGP_CBAJ_G0039692.1 mouse_genomes_project 15 80613276 80613505 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0041127.1 MGP_CBAJ_G0021721.1 mouse_genomes_project 15 82423181 82424577 + MGP_CBAJ_P0041127 Commd5 protein_coding protein_coding MGP_CBAJ_T0041128.1 MGP_CBAJ_G0021721.1 mouse_genomes_project 15 82423207 82424463 + MGP_CBAJ_P0041128 Commd5 protein_coding protein_coding MGP_CBAJ_T0040583.1 MGP_CBAJ_G0021567.1 mouse_genomes_project 15 58747344 58827578 + MGP_CBAJ_P0040583 Mtbp protein_coding protein_coding MGP_CBAJ_T0040584.1 MGP_CBAJ_G0021567.1 mouse_genomes_project 15 58747531 58809523 + MGP_CBAJ_P0040584 Mtbp protein_coding protein_coding MGP_CBAJ_T0040585.1 MGP_CBAJ_G0021567.1 mouse_genomes_project 15 58747671 58759014 + MGP_CBAJ_P0040585 Mtbp protein_coding nonsense_mediated_decay MGP_CBAJ_T0040586.1 MGP_CBAJ_G0021567.1 mouse_genomes_project 15 58770200 58827577 + MGP_CBAJ_P0040586 Mtbp protein_coding protein_coding MGP_CBAJ_T0040587.1 MGP_CBAJ_G0021567.1 mouse_genomes_project 15 58818741 58821093 + Mtbp protein_coding retained_intron MGP_CBAJ_T0040588.1 MGP_CBAJ_G0021567.1 mouse_genomes_project 15 58822606 58827576 + Mtbp protein_coding processed_transcript MGP_CBAJ_T0041496.1 MGP_CBAJ_G0021823.1 mouse_genomes_project 15 88203884 88204241 - MGP_CBAJ_P0041496 Gm8444 protein_coding protein_coding MGP_CBAJ_T0040387.1 MGP_CBAJ_G0021493.1 mouse_genomes_project 15 35125428 35168205 + MGP_CBAJ_P0040387 Pop1 protein_coding protein_coding MGP_CBAJ_T0040388.1 MGP_CBAJ_G0021493.1 mouse_genomes_project 15 35125447 35168194 + MGP_CBAJ_P0040388 Pop1 protein_coding protein_coding MGP_CBAJ_T0040389.1 MGP_CBAJ_G0021493.1 mouse_genomes_project 15 35141206 35143492 + Pop1 protein_coding retained_intron MGP_CBAJ_T0040390.1 MGP_CBAJ_G0021493.1 mouse_genomes_project 15 35145469 35149300 + Pop1 protein_coding processed_transcript MGP_CBAJ_T0040391.1 MGP_CBAJ_G0021493.1 mouse_genomes_project 15 35147071 35166718 + Pop1 protein_coding retained_intron MGP_CBAJ_T0040392.1 MGP_CBAJ_G0021493.1 mouse_genomes_project 15 35163701 35166788 + Pop1 protein_coding retained_intron MGP_CBAJ_T0040078.1 MGP_CBAJ_G0021395.1 mouse_genomes_project 15 895747 914091 - MGP_CBAJ_P0040078 Fbxo4 protein_coding protein_coding MGP_CBAJ_T0040079.1 MGP_CBAJ_G0021395.1 mouse_genomes_project 15 899751 905718 - Fbxo4 protein_coding processed_transcript MGP_CBAJ_T0040080.1 MGP_CBAJ_G0021395.1 mouse_genomes_project 15 904181 904880 - Fbxo4 protein_coding retained_intron MGP_CBAJ_T0040353.1 MGP_CBAJ_G0021480.1 mouse_genomes_project 15 31930790 31953377 + Fam173b protein_coding processed_transcript MGP_CBAJ_T0040354.1 MGP_CBAJ_G0021480.1 mouse_genomes_project 15 31931056 31949743 + MGP_CBAJ_P0040354 Fam173b protein_coding protein_coding MGP_CBAJ_T0040355.1 MGP_CBAJ_G0021480.1 mouse_genomes_project 15 31931056 31950817 + MGP_CBAJ_P0040355 Fam173b protein_coding nonsense_mediated_decay MGP_CBAJ_T0003567.1 MGP_CBAJ_G0003231.1 mouse_genomes_project 15 110189640 110202008 + Galnt6os antisense antisense MGP_CBAJ_T0009934.1 MGP_CBAJ_G0008072.1 mouse_genomes_project 15 81878073 81878133 + Mir6954 miRNA miRNA MGP_CBAJ_T0040926.1 MGP_CBAJ_G0021678.1 mouse_genomes_project 15 81411425 81442676 + MGP_CBAJ_P0040926 protein_coding protein_coding MGP_CBAJ_T0040927.1 MGP_CBAJ_G0021678.1 mouse_genomes_project 15 81416120 81442155 + MGP_CBAJ_P0040927 protein_coding protein_coding MGP_CBAJ_T0040928.1 MGP_CBAJ_G0021678.1 mouse_genomes_project 15 81441688 81445285 + protein_coding processed_transcript MGP_CBAJ_T0040929.1 MGP_CBAJ_G0021678.1 mouse_genomes_project 15 81442387 81453607 + protein_coding processed_transcript MGP_CBAJ_T0040930.1 MGP_CBAJ_G0021678.1 mouse_genomes_project 15 81444086 81445346 + protein_coding retained_intron MGP_CBAJ_T0042389.1 MGP_CBAJ_G0022119.1 mouse_genomes_project 15 112401362 112401527 + MGP_CBAJ_P0042389 Gm10337 protein_coding protein_coding MGP_CBAJ_T0041111.1 MGP_CBAJ_G0021717.1 mouse_genomes_project 15 82199975 82207951 - MGP_CBAJ_P0041111 Lrrc24 protein_coding protein_coding MGP_CBAJ_T0041112.1 MGP_CBAJ_G0021717.1 mouse_genomes_project 15 82200906 82203115 - Lrrc24 protein_coding retained_intron MGP_CBAJ_T0041113.1 MGP_CBAJ_G0021717.1 mouse_genomes_project 15 82205385 82207937 - Lrrc24 protein_coding retained_intron MGP_CBAJ_T0041114.1 MGP_CBAJ_G0021717.1 mouse_genomes_project 15 82207239 82209614 - MGP_CBAJ_P0041114 Lrrc24 protein_coding protein_coding MGP_CBAJ_T0041610.1 MGP_CBAJ_G0021864.1 mouse_genomes_project 15 89976854 90040371 - MGP_CBAJ_P0041610 Arfgap3 protein_coding protein_coding MGP_CBAJ_T0041611.1 MGP_CBAJ_G0021864.1 mouse_genomes_project 15 89977799 90040273 - MGP_CBAJ_P0041611 Arfgap3 protein_coding unknown_likely_coding MGP_CBAJ_T0042412.1 MGP_CBAJ_G0022123.1 mouse_genomes_project 15 112426853 112538113 - MGP_CBAJ_P0042412 protein_coding protein_coding MGP_CBAJ_T0042413.1 MGP_CBAJ_G0022123.1 mouse_genomes_project 15 112429429 112538490 - MGP_CBAJ_P0042413 protein_coding protein_coding MGP_CBAJ_T0042414.1 MGP_CBAJ_G0022123.1 mouse_genomes_project 15 112429429 112429819 - MGP_CBAJ_P0042414 protein_coding protein_coding MGP_CBAJ_T0042415.1 MGP_CBAJ_G0022123.1 mouse_genomes_project 15 112434365 112538479 - MGP_CBAJ_P0042415 protein_coding protein_coding MGP_CBAJ_T0042416.1 MGP_CBAJ_G0022123.1 mouse_genomes_project 15 112437440 112538493 - MGP_CBAJ_P0042416 protein_coding protein_coding MGP_CBAJ_T0042417.1 MGP_CBAJ_G0022123.1 mouse_genomes_project 15 112438120 112538128 - MGP_CBAJ_P0042417 protein_coding protein_coding MGP_CBAJ_T0042418.1 MGP_CBAJ_G0022123.1 mouse_genomes_project 15 112448885 112538478 - protein_coding retained_intron MGP_CBAJ_T0042419.1 MGP_CBAJ_G0022123.1 mouse_genomes_project 15 112450949 112538504 - MGP_CBAJ_P0042419 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042420.1 MGP_CBAJ_G0022123.1 mouse_genomes_project 15 112451001 112537962 - MGP_CBAJ_P0042420 protein_coding protein_coding MGP_CBAJ_T0042421.1 MGP_CBAJ_G0022123.1 mouse_genomes_project 15 112455228 112538107 - MGP_CBAJ_P0042421 protein_coding protein_coding MGP_CBAJ_T0042422.1 MGP_CBAJ_G0022123.1 mouse_genomes_project 15 112455228 112538486 - MGP_CBAJ_P0042422 protein_coding protein_coding MGP_CBAJ_T0042423.1 MGP_CBAJ_G0022123.1 mouse_genomes_project 15 112468853 112538110 - protein_coding retained_intron MGP_CBAJ_T0042424.1 MGP_CBAJ_G0022123.1 mouse_genomes_project 15 112506615 112538504 - protein_coding retained_intron MGP_CBAJ_T0040376.1 MGP_CBAJ_G0021490.1 mouse_genomes_project 15 35059867 35062271 - Rpl30 protein_coding processed_transcript MGP_CBAJ_T0040377.1 MGP_CBAJ_G0021490.1 mouse_genomes_project 15 35059867 35062523 - Rpl30 protein_coding retained_intron MGP_CBAJ_T0040378.1 MGP_CBAJ_G0021490.1 mouse_genomes_project 15 35059867 35063003 - MGP_CBAJ_P0040378 Rpl30 protein_coding protein_coding MGP_CBAJ_T0040379.1 MGP_CBAJ_G0021490.1 mouse_genomes_project 15 35059872 35062585 - MGP_CBAJ_P0040379 Rpl30 protein_coding protein_coding MGP_CBAJ_T0040380.1 MGP_CBAJ_G0021490.1 mouse_genomes_project 15 35059937 35061028 - Rpl30 protein_coding retained_intron MGP_CBAJ_T0040381.1 MGP_CBAJ_G0021490.1 mouse_genomes_project 15 35061883 35062622 - Rpl30 protein_coding processed_transcript MGP_CBAJ_T0011277.1 MGP_CBAJ_G0009415.1 mouse_genomes_project 15 112913963 112914120 + Gm27535 misc_RNA misc_RNA MGP_CBAJ_T0040265.1 MGP_CBAJ_G0021450.1 mouse_genomes_project 15 10231296 10497863 - MGP_CBAJ_P0040265 Pdzd2 protein_coding protein_coding MGP_CBAJ_T0040266.1 MGP_CBAJ_G0021450.1 mouse_genomes_project 15 10278205 10281037 - Pdzd2 protein_coding retained_intron MGP_CBAJ_T0040267.1 MGP_CBAJ_G0021450.1 mouse_genomes_project 15 10284658 10295119 - Pdzd2 protein_coding retained_intron MGP_CBAJ_T0040268.1 MGP_CBAJ_G0021450.1 mouse_genomes_project 15 10287008 10443884 - MGP_CBAJ_P0040268 Pdzd2 protein_coding protein_coding MGP_CBAJ_T0040269.1 MGP_CBAJ_G0021450.1 mouse_genomes_project 15 10331213 10663387 - Pdzd2 protein_coding retained_intron MGP_CBAJ_T0040270.1 MGP_CBAJ_G0021450.1 mouse_genomes_project 15 10345962 10386694 - MGP_CBAJ_P0040270 Pdzd2 protein_coding protein_coding MGP_CBAJ_T0040271.1 MGP_CBAJ_G0021450.1 mouse_genomes_project 15 10346002 10444483 - MGP_CBAJ_P0040271 Pdzd2 protein_coding protein_coding MGP_CBAJ_T0040272.1 MGP_CBAJ_G0021450.1 mouse_genomes_project 15 10416509 10444391 - Pdzd2 protein_coding processed_transcript MGP_CBAJ_T0040273.1 MGP_CBAJ_G0021450.1 mouse_genomes_project 15 10439554 10443887 - Pdzd2 protein_coding retained_intron MGP_CBAJ_T0040274.1 MGP_CBAJ_G0021450.1 mouse_genomes_project 15 10443668 10444838 - Pdzd2 protein_coding retained_intron MGP_CBAJ_T0040275.1 MGP_CBAJ_G0021450.1 mouse_genomes_project 15 10493821 10504673 - Pdzd2 protein_coding processed_transcript MGP_CBAJ_T0041520.1 MGP_CBAJ_G0021832.1 mouse_genomes_project 15 88381981 88405587 - MGP_CBAJ_P0041520 Desi1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041521.1 MGP_CBAJ_G0021832.1 mouse_genomes_project 15 88381981 88405597 - MGP_CBAJ_P0041521 Desi1 protein_coding protein_coding MGP_CBAJ_T0041522.1 MGP_CBAJ_G0021832.1 mouse_genomes_project 15 88383305 88405659 - MGP_CBAJ_P0041522 Desi1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041523.1 MGP_CBAJ_G0021832.1 mouse_genomes_project 15 88384103 88422964 - Desi1 protein_coding processed_transcript MGP_CBAJ_T0041524.1 MGP_CBAJ_G0021832.1 mouse_genomes_project 15 88384116 88405445 - MGP_CBAJ_P0041524 Desi1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041525.1 MGP_CBAJ_G0021832.1 mouse_genomes_project 15 88384179 88405471 - MGP_CBAJ_P0041525 Desi1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0006721.1 MGP_CBAJ_G0005536.1 mouse_genomes_project 15 113075840 113078159 - Gm28265 lincRNA lincRNA MGP_CBAJ_T0040750.1 MGP_CBAJ_G0021622.1 mouse_genomes_project 15 77508726 78014820 - MGP_CBAJ_P0040750 Trappc9 protein_coding protein_coding MGP_CBAJ_T0040751.1 MGP_CBAJ_G0021622.1 mouse_genomes_project 15 77508726 78009420 - MGP_CBAJ_P0040751 Trappc9 protein_coding protein_coding MGP_CBAJ_T0040752.1 MGP_CBAJ_G0021622.1 mouse_genomes_project 15 77726194 78014820 - MGP_CBAJ_P0040752 Trappc9 protein_coding protein_coding MGP_CBAJ_T0040753.1 MGP_CBAJ_G0021622.1 mouse_genomes_project 15 77780541 78014820 - MGP_CBAJ_P0040753 Trappc9 protein_coding protein_coding MGP_CBAJ_T0011276.1 MGP_CBAJ_G0009414.1 mouse_genomes_project 15 112913621 112913796 + Gm28011 misc_RNA misc_RNA MGP_CBAJ_T0041685.1 MGP_CBAJ_G0021891.1 mouse_genomes_project 15 92131750 92147337 + MGP_CBAJ_P0041685 Ribc2 protein_coding protein_coding MGP_CBAJ_T0041936.1 MGP_CBAJ_G0021961.1 mouse_genomes_project 15 102858279 102879788 - MGP_CBAJ_P0041936 protein_coding unknown_likely_coding MGP_CBAJ_T0041937.1 MGP_CBAJ_G0021961.1 mouse_genomes_project 15 102872226 102879600 - protein_coding retained_intron MGP_CBAJ_T0041938.1 MGP_CBAJ_G0021961.1 mouse_genomes_project 15 102876792 102879593 - MGP_CBAJ_P0041938 protein_coding protein_coding MGP_CBAJ_T0041519.1 MGP_CBAJ_G0021831.1 mouse_genomes_project 15 88377296 88411676 + MGP_CBAJ_P0041519 Xrcc6 protein_coding protein_coding MGP_CBAJ_T0041526.1 MGP_CBAJ_G0021831.1 mouse_genomes_project 15 88405834 88431517 + MGP_CBAJ_P0041526 Xrcc6 protein_coding protein_coding MGP_CBAJ_T0041527.1 MGP_CBAJ_G0021831.1 mouse_genomes_project 15 88405897 88414751 + MGP_CBAJ_P0041527 Xrcc6 protein_coding protein_coding MGP_CBAJ_T0041528.1 MGP_CBAJ_G0021831.1 mouse_genomes_project 15 88405948 88414800 + MGP_CBAJ_P0041528 Xrcc6 protein_coding protein_coding MGP_CBAJ_T0041529.1 MGP_CBAJ_G0021831.1 mouse_genomes_project 15 88411384 88412032 + Xrcc6 protein_coding retained_intron MGP_CBAJ_T0041530.1 MGP_CBAJ_G0021831.1 mouse_genomes_project 15 88412077 88416872 + Xrcc6 protein_coding retained_intron MGP_CBAJ_T0041531.1 MGP_CBAJ_G0021831.1 mouse_genomes_project 15 88414502 88418704 + Xrcc6 protein_coding retained_intron MGP_CBAJ_T0041532.1 MGP_CBAJ_G0021831.1 mouse_genomes_project 15 88417179 88431226 + Xrcc6 protein_coding processed_transcript MGP_CBAJ_T0041533.1 MGP_CBAJ_G0021831.1 mouse_genomes_project 15 88418171 88428934 + Xrcc6 protein_coding retained_intron MGP_CBAJ_T0000908.1 MGP_CBAJ_G0000843.1 mouse_genomes_project 15 87895516 87896371 - TEC TEC MGP_CBAJ_T0041197.1 MGP_CBAJ_G0021746.1 mouse_genomes_project 15 84245879 84255819 + MGP_CBAJ_P0041197 Kctd17 protein_coding protein_coding MGP_CBAJ_T0041198.1 MGP_CBAJ_G0021746.1 mouse_genomes_project 15 84245879 84255819 + MGP_CBAJ_P0041198 Kctd17 protein_coding protein_coding MGP_CBAJ_T0041199.1 MGP_CBAJ_G0021746.1 mouse_genomes_project 15 84245943 84256231 + MGP_CBAJ_P0041199 Kctd17 protein_coding protein_coding MGP_CBAJ_T0041200.1 MGP_CBAJ_G0021746.1 mouse_genomes_project 15 84245977 84256165 + MGP_CBAJ_P0041200 Kctd17 protein_coding protein_coding MGP_CBAJ_T0041201.1 MGP_CBAJ_G0021746.1 mouse_genomes_project 15 84246006 84253182 + Kctd17 protein_coding retained_intron MGP_CBAJ_T0041202.1 MGP_CBAJ_G0021746.1 mouse_genomes_project 15 84246111 84255969 + MGP_CBAJ_P0041202 Kctd17 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041203.1 MGP_CBAJ_G0021746.1 mouse_genomes_project 15 84247407 84255902 + MGP_CBAJ_P0041203 Kctd17 protein_coding protein_coding MGP_CBAJ_T0041204.1 MGP_CBAJ_G0021746.1 mouse_genomes_project 15 84250308 84255056 + Kctd17 protein_coding retained_intron MGP_CBAJ_T0041205.1 MGP_CBAJ_G0021746.1 mouse_genomes_project 15 84251303 84254901 + Kctd17 protein_coding retained_intron MGP_CBAJ_T0040338.1 MGP_CBAJ_G0021475.1 mouse_genomes_project 15 31578367 31667481 - MGP_CBAJ_P0040338 Ankrd33b protein_coding protein_coding MGP_CBAJ_T0040339.1 MGP_CBAJ_G0021475.1 mouse_genomes_project 15 31578367 31667448 - MGP_CBAJ_P0040339 Ankrd33b protein_coding protein_coding MGP_CBAJ_T0040340.1 MGP_CBAJ_G0021475.1 mouse_genomes_project 15 31579713 31667254 - MGP_CBAJ_P0040340 Ankrd33b protein_coding nonsense_mediated_decay MGP_CBAJ_T0040341.1 MGP_CBAJ_G0021475.1 mouse_genomes_project 15 31580622 31667448 - MGP_CBAJ_P0040341 Ankrd33b protein_coding nonsense_mediated_decay MGP_CBAJ_T0040342.1 MGP_CBAJ_G0021475.1 mouse_genomes_project 15 31615077 31667290 - MGP_CBAJ_P0040342 Ankrd33b protein_coding protein_coding MGP_CBAJ_T0042437.1 MGP_CBAJ_G0022130.1 mouse_genomes_project 15 112931522 112982296 + Hoxc5 protein_coding processed_transcript MGP_CBAJ_T0042445.1 MGP_CBAJ_G0022130.1 mouse_genomes_project 15 112980434 112984049 + MGP_CBAJ_P0042445 Hoxc5 protein_coding protein_coding MGP_CBAJ_T0006653.1 MGP_CBAJ_G0005490.1 mouse_genomes_project 15 32608938 32609589 + 4930518I17Rik lincRNA lincRNA MGP_CBAJ_T0041835.1 MGP_CBAJ_G0021934.1 mouse_genomes_project 15 97055612 97057653 + MGP_CBAJ_P0041835 Klhdc7b protein_coding protein_coding MGP_CBAJ_T0041795.1 MGP_CBAJ_G0021925.1 mouse_genomes_project 15 96840145 96932434 + MGP_CBAJ_P0041795 Ppp6r2 protein_coding unknown_likely_coding MGP_CBAJ_T0041796.1 MGP_CBAJ_G0021925.1 mouse_genomes_project 15 96902709 96935577 + MGP_CBAJ_P0041796 Ppp6r2 protein_coding protein_coding MGP_CBAJ_T0042210.1 MGP_CBAJ_G0022055.1 mouse_genomes_project 15 109831798 109866952 - MGP_CBAJ_P0042210 Slc11a2 protein_coding protein_coding MGP_CBAJ_T0042211.1 MGP_CBAJ_G0022055.1 mouse_genomes_project 15 109836319 109866899 - MGP_CBAJ_P0042211 Slc11a2 protein_coding protein_coding MGP_CBAJ_T0042212.1 MGP_CBAJ_G0022055.1 mouse_genomes_project 15 109841382 109846993 - MGP_CBAJ_P0042212 Slc11a2 protein_coding protein_coding MGP_CBAJ_T0042213.1 MGP_CBAJ_G0022055.1 mouse_genomes_project 15 109841570 109847172 - Slc11a2 protein_coding retained_intron MGP_CBAJ_T0042214.1 MGP_CBAJ_G0022055.1 mouse_genomes_project 15 109850154 109868968 - MGP_CBAJ_P0042214 Slc11a2 protein_coding protein_coding MGP_CBAJ_T0042215.1 MGP_CBAJ_G0022055.1 mouse_genomes_project 15 109852015 109866866 - MGP_CBAJ_P0042215 Slc11a2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042216.1 MGP_CBAJ_G0022055.1 mouse_genomes_project 15 109853149 109868110 - MGP_CBAJ_P0042216 Slc11a2 protein_coding protein_coding MGP_CBAJ_T0042217.1 MGP_CBAJ_G0022055.1 mouse_genomes_project 15 109853995 109867988 - MGP_CBAJ_P0042217 Slc11a2 protein_coding protein_coding MGP_CBAJ_T0003564.1 MGP_CBAJ_G0003228.1 mouse_genomes_project 15 109277619 109278743 - 2310068J16Rik antisense antisense MGP_CBAJ_T0040785.1 MGP_CBAJ_G0021631.1 mouse_genomes_project 15 78882412 78887760 + MGP_CBAJ_P0040785 Gm6569 protein_coding protein_coding MGP_CBAJ_T0009905.1 MGP_CBAJ_G0008043.1 mouse_genomes_project 15 10021961 10022044 + Mir1898 miRNA miRNA MGP_CBAJ_T0040706.1 MGP_CBAJ_G0021611.1 mouse_genomes_project 15 70926809 71007241 + MGP_CBAJ_P0040706 Phf20l1 protein_coding protein_coding MGP_CBAJ_T0041259.1 MGP_CBAJ_G0021766.1 mouse_genomes_project 15 84998193 85023266 + MGP_CBAJ_P0041259 Eif3l protein_coding protein_coding MGP_CBAJ_T0041098.1 MGP_CBAJ_G0021713.1 mouse_genomes_project 15 82181645 82184577 + MGP_CBAJ_P0041098 Gpt protein_coding protein_coding MGP_CBAJ_T0040361.1 MGP_CBAJ_G0021485.1 mouse_genomes_project 15 34203257 34207141 - MGP_CBAJ_P0040361 Tspyl5 protein_coding protein_coding MGP_CBAJ_T0041233.1 MGP_CBAJ_G0021760.1 mouse_genomes_project 15 84821396 84827771 + MGP_CBAJ_P0041233 Lgals1 protein_coding protein_coding MGP_CBAJ_T0098902.1 MGP_CBAJ_G0037157.1 mouse_genomes_project 15 63805516 63805623 + Gm25875 snRNA snRNA MGP_CBAJ_T0041569.1 MGP_CBAJ_G0021854.1 mouse_genomes_project 15 89274951 89276317 - MGP_CBAJ_P0041569 Cyp2d37-ps protein_coding protein_coding MGP_CBAJ_T0009945.1 MGP_CBAJ_G0008083.1 mouse_genomes_project 15 87902250 87902304 + Gm23880 miRNA miRNA MGP_CBAJ_T0040302.1 MGP_CBAJ_G0021460.1 mouse_genomes_project 15 25137941 25191671 - MGP_CBAJ_P0040302 Basp1 protein_coding protein_coding MGP_CBAJ_T0040632.1 MGP_CBAJ_G0021586.1 mouse_genomes_project 15 62393462 62394195 - MGP_CBAJ_P0040632 Ube2d4 protein_coding protein_coding MGP_CBAJ_T0017196.1 MGP_CBAJ_G0015035.1 mouse_genomes_project 15 59987458 59991973 + Has2os processed_transcript antisense MGP_CBAJ_T0017197.1 MGP_CBAJ_G0015035.1 mouse_genomes_project 15 59991064 60095573 + Has2os processed_transcript antisense MGP_CBAJ_T0017198.1 MGP_CBAJ_G0015035.1 mouse_genomes_project 15 59991466 60095289 + Has2os processed_transcript antisense MGP_CBAJ_T0017199.1 MGP_CBAJ_G0015035.1 mouse_genomes_project 15 60079930 60095252 + Has2os processed_transcript lincRNA MGP_CBAJ_T0042448.1 MGP_CBAJ_G0022135.1 mouse_genomes_project 15 113133121 113137819 - MGP_CBAJ_P0042448 Smug1 protein_coding protein_coding MGP_CBAJ_T0042107.1 MGP_CBAJ_G0022022.1 mouse_genomes_project 15 108186976 108195387 + MGP_CBAJ_P0042107 Troap protein_coding protein_coding MGP_CBAJ_T0009972.1 MGP_CBAJ_G0008110.1 mouse_genomes_project 15 110796659 110796722 + Mir6962 miRNA miRNA MGP_CBAJ_T0041859.1 MGP_CBAJ_G0021941.1 mouse_genomes_project 15 97196666 97260356 + MGP_CBAJ_P0041859 Shank3 protein_coding protein_coding MGP_CBAJ_T0041860.1 MGP_CBAJ_G0021941.1 mouse_genomes_project 15 97196824 97260356 + MGP_CBAJ_P0041860 Shank3 protein_coding protein_coding MGP_CBAJ_T0041861.1 MGP_CBAJ_G0021941.1 mouse_genomes_project 15 97197090 97200389 + Shank3 protein_coding processed_transcript MGP_CBAJ_T0041862.1 MGP_CBAJ_G0021941.1 mouse_genomes_project 15 97198250 97260354 + MGP_CBAJ_P0041862 Shank3 protein_coding protein_coding MGP_CBAJ_T0041863.1 MGP_CBAJ_G0021941.1 mouse_genomes_project 15 97221329 97233265 + Shank3 protein_coding processed_transcript MGP_CBAJ_T0041864.1 MGP_CBAJ_G0021941.1 mouse_genomes_project 15 97229666 97231279 + Shank3 protein_coding processed_transcript MGP_CBAJ_T0041865.1 MGP_CBAJ_G0021941.1 mouse_genomes_project 15 97231760 97242691 + MGP_CBAJ_P0041865 Shank3 protein_coding protein_coding MGP_CBAJ_T0017208.1 MGP_CBAJ_G0015041.1 mouse_genomes_project 15 72814466 72817181 - Gm26621 processed_transcript TEC MGP_CBAJ_T0017209.1 MGP_CBAJ_G0015041.1 mouse_genomes_project 15 72814887 72817161 - Gm26621 processed_transcript processed_transcript MGP_CBAJ_T0041648.1 MGP_CBAJ_G0021875.1 mouse_genomes_project 15 90940675 90954832 - MGP_CBAJ_P0041648 Pnpla5 protein_coding protein_coding MGP_CBAJ_T0009909.1 MGP_CBAJ_G0008047.1 mouse_genomes_project 15 21248517 21248686 - Gm44373 miRNA miRNA MGP_CBAJ_T0017226.1 MGP_CBAJ_G0015051.1 mouse_genomes_project 15 108409829 108421772 + 1700120C14Rik processed_transcript antisense MGP_CBAJ_T0017227.1 MGP_CBAJ_G0015051.1 mouse_genomes_project 15 108409877 108419837 + 1700120C14Rik processed_transcript antisense MGP_CBAJ_T0017228.1 MGP_CBAJ_G0015051.1 mouse_genomes_project 15 108409879 108411301 + 1700120C14Rik processed_transcript retained_intron MGP_CBAJ_T0100179.1 MGP_CBAJ_G0038434.1 mouse_genomes_project 15 78337790 78337913 + Gm24787 snoRNA snoRNA MGP_CBAJ_T0097966.1 MGP_CBAJ_G0036239.1 mouse_genomes_project 15 99481292 99481405 - Gm24647 rRNA rRNA MGP_CBAJ_T0041184.1 MGP_CBAJ_G0021742.1 mouse_genomes_project 15 83995881 84013154 + MGP_CBAJ_P0041184 Ncf4 protein_coding protein_coding MGP_CBAJ_T0041185.1 MGP_CBAJ_G0021742.1 mouse_genomes_project 15 83995924 84011562 + MGP_CBAJ_P0041185 Ncf4 protein_coding protein_coding MGP_CBAJ_T0041186.1 MGP_CBAJ_G0021742.1 mouse_genomes_project 15 84004100 84007099 + Ncf4 protein_coding retained_intron MGP_CBAJ_T0041187.1 MGP_CBAJ_G0021742.1 mouse_genomes_project 15 84004314 84011337 + Ncf4 protein_coding processed_transcript MGP_CBAJ_T0041188.1 MGP_CBAJ_G0021742.1 mouse_genomes_project 15 84006520 84011370 + Ncf4 protein_coding retained_intron MGP_CBAJ_T0041189.1 MGP_CBAJ_G0021742.1 mouse_genomes_project 15 84011445 84013149 + Ncf4 protein_coding retained_intron MGP_CBAJ_T0041570.1 MGP_CBAJ_G0021855.1 mouse_genomes_project 15 89346604 89353069 - MGP_CBAJ_P0041570 Cyp2d40 protein_coding protein_coding MGP_CBAJ_T0006713.1 MGP_CBAJ_G0005529.1 mouse_genomes_project 15 110090835 110091808 - C330013E15Rik lincRNA lincRNA MGP_CBAJ_T0041952.1 MGP_CBAJ_G0021967.1 mouse_genomes_project 15 104297998 104301444 - MGP_CBAJ_P0041952 A130051J06Rik protein_coding protein_coding MGP_CBAJ_T0040888.1 MGP_CBAJ_G0021666.1 mouse_genomes_project 15 81251653 81256704 + MGP_CBAJ_P0040888 Gsdmd protein_coding protein_coding MGP_CBAJ_T0041311.1 MGP_CBAJ_G0021777.1 mouse_genomes_project 15 85405380 85429540 - MGP_CBAJ_P0041311 Csnk1e protein_coding protein_coding MGP_CBAJ_T0041312.1 MGP_CBAJ_G0021777.1 mouse_genomes_project 15 85406687 85408859 - Csnk1e protein_coding retained_intron MGP_CBAJ_T0041313.1 MGP_CBAJ_G0021777.1 mouse_genomes_project 15 85406708 85429543 - MGP_CBAJ_P0041313 Csnk1e protein_coding protein_coding MGP_CBAJ_T0041314.1 MGP_CBAJ_G0021777.1 mouse_genomes_project 15 85410030 85429358 - MGP_CBAJ_P0041314 Csnk1e protein_coding protein_coding MGP_CBAJ_T0041315.1 MGP_CBAJ_G0021777.1 mouse_genomes_project 15 85411192 85411848 - Csnk1e protein_coding retained_intron MGP_CBAJ_T0041316.1 MGP_CBAJ_G0021777.1 mouse_genomes_project 15 85411714 85413108 - Csnk1e protein_coding retained_intron MGP_CBAJ_T0041317.1 MGP_CBAJ_G0021777.1 mouse_genomes_project 15 85412286 85413993 - Csnk1e protein_coding retained_intron MGP_CBAJ_T0041318.1 MGP_CBAJ_G0021777.1 mouse_genomes_project 15 85412404 85417409 - Csnk1e protein_coding retained_intron MGP_CBAJ_T0041319.1 MGP_CBAJ_G0021777.1 mouse_genomes_project 15 85413947 85426560 - MGP_CBAJ_P0041319 Csnk1e protein_coding protein_coding MGP_CBAJ_T0041320.1 MGP_CBAJ_G0021777.1 mouse_genomes_project 15 85414016 85429358 - MGP_CBAJ_P0041320 Csnk1e protein_coding protein_coding MGP_CBAJ_T0041321.1 MGP_CBAJ_G0021777.1 mouse_genomes_project 15 85417587 85435592 - MGP_CBAJ_P0041321 Csnk1e protein_coding protein_coding MGP_CBAJ_T0040496.1 MGP_CBAJ_G0021531.1 mouse_genomes_project 15 42934220 43413988 + MGP_CBAJ_P0040496 Oxr1 protein_coding protein_coding MGP_CBAJ_T0040497.1 MGP_CBAJ_G0021531.1 mouse_genomes_project 15 43334642 43413988 + MGP_CBAJ_P0040497 Oxr1 protein_coding protein_coding MGP_CBAJ_T0040498.1 MGP_CBAJ_G0021531.1 mouse_genomes_project 15 43334642 43413993 + MGP_CBAJ_P0040498 Oxr1 protein_coding protein_coding MGP_CBAJ_T0040499.1 MGP_CBAJ_G0021531.1 mouse_genomes_project 15 43335123 43413988 + MGP_CBAJ_P0040499 Oxr1 protein_coding protein_coding MGP_CBAJ_T0040500.1 MGP_CBAJ_G0021531.1 mouse_genomes_project 15 43335131 43413991 + MGP_CBAJ_P0040500 Oxr1 protein_coding protein_coding MGP_CBAJ_T0040501.1 MGP_CBAJ_G0021531.1 mouse_genomes_project 15 43382732 43413988 + MGP_CBAJ_P0040501 Oxr1 protein_coding protein_coding MGP_CBAJ_T0041374.1 MGP_CBAJ_G0021793.1 mouse_genomes_project 15 85982124 86002138 - MGP_CBAJ_P0041374 Cbx7 protein_coding protein_coding MGP_CBAJ_T0041375.1 MGP_CBAJ_G0021793.1 mouse_genomes_project 15 85982138 86002261 - MGP_CBAJ_P0041375 Cbx7 protein_coding protein_coding MGP_CBAJ_T0041376.1 MGP_CBAJ_G0021793.1 mouse_genomes_project 15 85982141 86002390 - Cbx7 protein_coding retained_intron MGP_CBAJ_T0041377.1 MGP_CBAJ_G0021793.1 mouse_genomes_project 15 85987965 86003506 - MGP_CBAJ_P0041377 Cbx7 protein_coding protein_coding MGP_CBAJ_T0041378.1 MGP_CBAJ_G0021793.1 mouse_genomes_project 15 85988235 86049194 - MGP_CBAJ_P0041378 Cbx7 protein_coding protein_coding MGP_CBAJ_T0041379.1 MGP_CBAJ_G0021793.1 mouse_genomes_project 15 85988738 86002138 - MGP_CBAJ_P0041379 Cbx7 protein_coding protein_coding MGP_CBAJ_T0041380.1 MGP_CBAJ_G0021793.1 mouse_genomes_project 15 86000226 86003437 - Cbx7 protein_coding retained_intron MGP_CBAJ_T0041497.1 MGP_CBAJ_G0021824.1 mouse_genomes_project 15 88208819 88222095 - MGP_CBAJ_P0041497 Tob2 protein_coding protein_coding MGP_CBAJ_T0041143.1 MGP_CBAJ_G0021727.1 mouse_genomes_project 15 82625618 82870326 - MGP_CBAJ_P0041143 Rbfox2 protein_coding protein_coding MGP_CBAJ_T0041144.1 MGP_CBAJ_G0021727.1 mouse_genomes_project 15 82625619 82702431 - MGP_CBAJ_P0041144 Rbfox2 protein_coding protein_coding MGP_CBAJ_T0041145.1 MGP_CBAJ_G0021727.1 mouse_genomes_project 15 82625619 82870326 - MGP_CBAJ_P0041145 Rbfox2 protein_coding protein_coding MGP_CBAJ_T0041146.1 MGP_CBAJ_G0021727.1 mouse_genomes_project 15 82625619 82702431 - MGP_CBAJ_P0041146 Rbfox2 protein_coding protein_coding MGP_CBAJ_T0006718.1 MGP_CBAJ_G0005533.1 mouse_genomes_project 15 112373411 112380293 - lincRNA lincRNA MGP_CBAJ_T0041154.1 MGP_CBAJ_G0021731.1 mouse_genomes_project 15 83380783 83395261 + MGP_CBAJ_P0041154 protein_coding protein_coding MGP_CBAJ_T0000907.1 MGP_CBAJ_G0000842.1 mouse_genomes_project 15 72818349 72821272 - TEC TEC MGP_CBAJ_T0041949.1 MGP_CBAJ_G0021965.1 mouse_genomes_project 15 103658326 103996932 - MGP_CBAJ_P0041949 Nell2 protein_coding protein_coding MGP_CBAJ_T0041950.1 MGP_CBAJ_G0021965.1 mouse_genomes_project 15 103658807 103996478 - MGP_CBAJ_P0041950 Nell2 protein_coding protein_coding MGP_CBAJ_T0040985.1 MGP_CBAJ_G0021689.1 mouse_genomes_project 15 81749711 81752983 + MGP_CBAJ_P0040985 Exosc4 protein_coding protein_coding MGP_CBAJ_T0040986.1 MGP_CBAJ_G0021689.1 mouse_genomes_project 15 81749905 81751400 + Exosc4 protein_coding processed_transcript MGP_CBAJ_T0012911.1 MGP_CBAJ_G0011023.1 mouse_genomes_project 15 57132509 57133986 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0042172.1 MGP_CBAJ_G0022041.1 mouse_genomes_project 15 108954080 108965067 + MGP_CBAJ_P0042172 Smarcd1 protein_coding protein_coding MGP_CBAJ_T0006688.1 MGP_CBAJ_G0005513.1 mouse_genomes_project 15 85778292 85794475 + Gm16576 lincRNA lincRNA MGP_CBAJ_T0040152.1 MGP_CBAJ_G0021417.1 mouse_genomes_project 15 5461205 5516437 + MGP_CBAJ_P0040152 Nup155 protein_coding protein_coding MGP_CBAJ_T0098915.1 MGP_CBAJ_G0037170.1 mouse_genomes_project 15 87284626 87284777 + Gm25131 snRNA snRNA MGP_CBAJ_T0040151.1 MGP_CBAJ_G0021416.1 mouse_genomes_project 15 5182122 5451855 - MGP_CBAJ_P0040151 Wdr70 protein_coding protein_coding MGP_CBAJ_T0042056.1 MGP_CBAJ_G0022003.1 mouse_genomes_project 15 107515807 107553317 - MGP_CBAJ_P0042056 Ccnt1 protein_coding protein_coding MGP_CBAJ_T0042057.1 MGP_CBAJ_G0022003.1 mouse_genomes_project 15 107515817 107522662 - Ccnt1 protein_coding processed_transcript MGP_CBAJ_T0042058.1 MGP_CBAJ_G0022003.1 mouse_genomes_project 15 107522852 107550031 - MGP_CBAJ_P0042058 Ccnt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042059.1 MGP_CBAJ_G0022003.1 mouse_genomes_project 15 107522852 107550031 - MGP_CBAJ_P0042059 Ccnt1 protein_coding protein_coding MGP_CBAJ_T0042060.1 MGP_CBAJ_G0022003.1 mouse_genomes_project 15 107523780 107536922 - Ccnt1 protein_coding retained_intron MGP_CBAJ_T0042061.1 MGP_CBAJ_G0022003.1 mouse_genomes_project 15 107523981 107526667 - Ccnt1 protein_coding retained_intron MGP_CBAJ_T0042062.1 MGP_CBAJ_G0022003.1 mouse_genomes_project 15 107524208 107547523 - Ccnt1 protein_coding retained_intron MGP_CBAJ_T0042063.1 MGP_CBAJ_G0022003.1 mouse_genomes_project 15 107528317 107549940 - Ccnt1 protein_coding retained_intron MGP_CBAJ_T0042064.1 MGP_CBAJ_G0022003.1 mouse_genomes_project 15 107540839 107550075 - Ccnt1 protein_coding retained_intron MGP_CBAJ_T0041970.1 MGP_CBAJ_G0021977.1 mouse_genomes_project 15 105976088 106132727 + MGP_CBAJ_P0041970 Pced1b protein_coding protein_coding MGP_CBAJ_T0042425.1 MGP_CBAJ_G0022124.1 mouse_genomes_project 15 112579284 112587549 - MGP_CBAJ_P0042425 Atp5g2 protein_coding protein_coding MGP_CBAJ_T0042426.1 MGP_CBAJ_G0022124.1 mouse_genomes_project 15 112579434 112584165 - MGP_CBAJ_P0042426 Atp5g2 protein_coding protein_coding MGP_CBAJ_T0042427.1 MGP_CBAJ_G0022124.1 mouse_genomes_project 15 112581164 112584159 - MGP_CBAJ_P0042427 Atp5g2 protein_coding protein_coding MGP_CBAJ_T0042428.1 MGP_CBAJ_G0022124.1 mouse_genomes_project 15 112582226 112588775 - MGP_CBAJ_P0042428 Atp5g2 protein_coding protein_coding MGP_CBAJ_T0040435.1 MGP_CBAJ_G0021509.1 mouse_genomes_project 15 37808474 37817790 - MGP_CBAJ_P0040435 Gm10384 protein_coding protein_coding MGP_CBAJ_T0100184.1 MGP_CBAJ_G0038439.1 mouse_genomes_project 15 103386189 103386321 - Gm23129 snoRNA snoRNA MGP_CBAJ_T0042320.1 MGP_CBAJ_G0022099.1 mouse_genomes_project 15 111871175 111898743 + MGP_CBAJ_P0042320 Eif4b protein_coding protein_coding MGP_CBAJ_T0041566.1 MGP_CBAJ_G0021851.1 mouse_genomes_project 15 88950881 88955345 + MGP_CBAJ_P0041566 Cyp2d9 protein_coding protein_coding MGP_CBAJ_T0100157.1 MGP_CBAJ_G0038412.1 mouse_genomes_project 15 32626112 32626183 - Snord123 snoRNA snoRNA MGP_CBAJ_T0040258.1 MGP_CBAJ_G0021447.1 mouse_genomes_project 15 10064379 10135784 + MGP_CBAJ_P0040258 Mtmr12 protein_coding protein_coding MGP_CBAJ_T0040259.1 MGP_CBAJ_G0021447.1 mouse_genomes_project 15 10064436 10135538 + MGP_CBAJ_P0040259 Mtmr12 protein_coding protein_coding MGP_CBAJ_T0040260.1 MGP_CBAJ_G0021447.1 mouse_genomes_project 15 10064455 10135663 + MGP_CBAJ_P0040260 Mtmr12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040261.1 MGP_CBAJ_G0021447.1 mouse_genomes_project 15 10064469 10135781 + MGP_CBAJ_P0040261 Mtmr12 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040262.1 MGP_CBAJ_G0021447.1 mouse_genomes_project 15 10082676 10105672 + Mtmr12 protein_coding processed_transcript MGP_CBAJ_T0040510.1 MGP_CBAJ_G0021539.1 mouse_genomes_project 15 46207571 46270861 - MGP_CBAJ_P0040510 Nudcd1 protein_coding unknown_likely_coding MGP_CBAJ_T0040511.1 MGP_CBAJ_G0021539.1 mouse_genomes_project 15 46207574 46271391 - MGP_CBAJ_P0040511 Nudcd1 protein_coding protein_coding MGP_CBAJ_T0009920.1 MGP_CBAJ_G0008058.1 mouse_genomes_project 15 40574266 40574375 - Gm24098 miRNA miRNA MGP_CBAJ_T0040863.1 MGP_CBAJ_G0021659.1 mouse_genomes_project 15 80926677 80941829 - MGP_CBAJ_P0040863 Ly6h protein_coding protein_coding MGP_CBAJ_T0040864.1 MGP_CBAJ_G0021659.1 mouse_genomes_project 15 80928223 80941829 - MGP_CBAJ_P0040864 Ly6h protein_coding nonsense_mediated_decay MGP_CBAJ_T0040865.1 MGP_CBAJ_G0021659.1 mouse_genomes_project 15 80939922 80942436 - MGP_CBAJ_P0040865 Ly6h protein_coding protein_coding MGP_CBAJ_T0040866.1 MGP_CBAJ_G0021659.1 mouse_genomes_project 15 80939923 80942037 - MGP_CBAJ_P0040866 Ly6h protein_coding protein_coding MGP_CBAJ_T0040867.1 MGP_CBAJ_G0021659.1 mouse_genomes_project 15 80939925 80941838 - MGP_CBAJ_P0040867 Ly6h protein_coding protein_coding MGP_CBAJ_T0040868.1 MGP_CBAJ_G0021659.1 mouse_genomes_project 15 80940204 80942397 - MGP_CBAJ_P0040868 Ly6h protein_coding protein_coding MGP_CBAJ_T0040869.1 MGP_CBAJ_G0021659.1 mouse_genomes_project 15 80940391 80941813 - Ly6h protein_coding retained_intron MGP_CBAJ_T0042112.1 MGP_CBAJ_G0022026.1 mouse_genomes_project 15 108376767 108397964 + MGP_CBAJ_P0042112 Kcnh3 protein_coding protein_coding MGP_CBAJ_T0006693.1 MGP_CBAJ_G0005517.1 mouse_genomes_project 15 90047649 90062289 - 1700001L05Rik lincRNA lincRNA MGP_CBAJ_T0006694.1 MGP_CBAJ_G0005517.1 mouse_genomes_project 15 90047657 90062018 - 1700001L05Rik lincRNA lincRNA MGP_CBAJ_T0006695.1 MGP_CBAJ_G0005517.1 mouse_genomes_project 15 90047683 90062284 - 1700001L05Rik lincRNA lincRNA MGP_CBAJ_T0006696.1 MGP_CBAJ_G0005517.1 mouse_genomes_project 15 90048741 90060149 - 1700001L05Rik lincRNA lincRNA MGP_CBAJ_T0012923.1 MGP_CBAJ_G0011035.1 mouse_genomes_project 15 81244133 81245543 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0042350.1 MGP_CBAJ_G0022110.1 mouse_genomes_project 15 112187129 112195242 + Pfdn5 protein_coding retained_intron MGP_CBAJ_T0042351.1 MGP_CBAJ_G0022110.1 mouse_genomes_project 15 112187150 112195183 + MGP_CBAJ_P0042351 Pfdn5 protein_coding protein_coding MGP_CBAJ_T0042352.1 MGP_CBAJ_G0022110.1 mouse_genomes_project 15 112187150 112195320 + MGP_CBAJ_P0042352 Pfdn5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042353.1 MGP_CBAJ_G0022110.1 mouse_genomes_project 15 112187150 112195329 + MGP_CBAJ_P0042353 Pfdn5 protein_coding protein_coding MGP_CBAJ_T0042354.1 MGP_CBAJ_G0022110.1 mouse_genomes_project 15 112187352 112195296 + MGP_CBAJ_P0042354 Pfdn5 protein_coding protein_coding MGP_CBAJ_T0012895.1 MGP_CBAJ_G0011007.1 mouse_genomes_project 15 12620671 12621073 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0040421.1 MGP_CBAJ_G0021507.1 mouse_genomes_project 15 37498429 37514897 - MGP_CBAJ_P0040421 protein_coding protein_coding MGP_CBAJ_T0040422.1 MGP_CBAJ_G0021507.1 mouse_genomes_project 15 37501929 37503938 - MGP_CBAJ_P0040422 protein_coding protein_coding MGP_CBAJ_T0040423.1 MGP_CBAJ_G0021507.1 mouse_genomes_project 15 37501942 37504231 - protein_coding processed_transcript MGP_CBAJ_T0040424.1 MGP_CBAJ_G0021507.1 mouse_genomes_project 15 37501942 37503345 - protein_coding processed_transcript MGP_CBAJ_T0040425.1 MGP_CBAJ_G0021507.1 mouse_genomes_project 15 37502119 37503655 - protein_coding processed_transcript MGP_CBAJ_T0040426.1 MGP_CBAJ_G0021507.1 mouse_genomes_project 15 37504219 37508185 - protein_coding processed_transcript MGP_CBAJ_T0040427.1 MGP_CBAJ_G0021507.1 mouse_genomes_project 15 37509334 37514897 - protein_coding processed_transcript MGP_CBAJ_T0042080.1 MGP_CBAJ_G0022010.1 mouse_genomes_project 15 107738692 107742901 - MGP_CBAJ_P0042080 Fkbp11 protein_coding protein_coding MGP_CBAJ_T0040191.1 MGP_CBAJ_G0021426.1 mouse_genomes_project 15 6812719 6854847 + MGP_CBAJ_P0040191 Ugt3a2 protein_coding protein_coding MGP_CBAJ_T0040192.1 MGP_CBAJ_G0021426.1 mouse_genomes_project 15 6812758 6844944 + Ugt3a2 protein_coding retained_intron MGP_CBAJ_T0006712.1 MGP_CBAJ_G0005528.1 mouse_genomes_project 15 109914136 109923693 - 5330439K02Rik lincRNA lincRNA MGP_CBAJ_T0042312.1 MGP_CBAJ_G0022091.1 mouse_genomes_project 15 111599630 111604991 - MGP_CBAJ_P0042312 Krt1 protein_coding protein_coding MGP_CBAJ_T0040545.1 MGP_CBAJ_G0021552.1 mouse_genomes_project 15 55678636 55701582 + MGP_CBAJ_P0040545 Med30 protein_coding protein_coding MGP_CBAJ_T0097960.1 MGP_CBAJ_G0036233.1 mouse_genomes_project 15 30794287 30794406 + Gm23956 rRNA rRNA MGP_CBAJ_T0100178.1 MGP_CBAJ_G0038433.1 mouse_genomes_project 15 76727838 76728016 + Gm22519 snoRNA snoRNA MGP_CBAJ_T0040624.1 MGP_CBAJ_G0021580.1 mouse_genomes_project 15 61632566 61676563 - MGP_CBAJ_P0040624 Fbxo32 protein_coding protein_coding MGP_CBAJ_T0011255.1 MGP_CBAJ_G0009393.1 mouse_genomes_project 15 3690028 3690304 + Gm23218 misc_RNA misc_RNA MGP_CBAJ_T0041336.1 MGP_CBAJ_G0021787.1 mouse_genomes_project 15 85755962 85778051 - Sun2 protein_coding retained_intron MGP_CBAJ_T0041337.1 MGP_CBAJ_G0021787.1 mouse_genomes_project 15 85755962 85778129 - MGP_CBAJ_P0041337 Sun2 protein_coding protein_coding MGP_CBAJ_T0041338.1 MGP_CBAJ_G0021787.1 mouse_genomes_project 15 85755963 85778099 - MGP_CBAJ_P0041338 Sun2 protein_coding protein_coding MGP_CBAJ_T0041339.1 MGP_CBAJ_G0021787.1 mouse_genomes_project 15 85755965 85778131 - MGP_CBAJ_P0041339 Sun2 protein_coding protein_coding MGP_CBAJ_T0041340.1 MGP_CBAJ_G0021787.1 mouse_genomes_project 15 85761516 85778099 - Sun2 protein_coding retained_intron MGP_CBAJ_T0041341.1 MGP_CBAJ_G0021787.1 mouse_genomes_project 15 85766448 85768292 - Sun2 protein_coding retained_intron MGP_CBAJ_T0041342.1 MGP_CBAJ_G0021787.1 mouse_genomes_project 15 85774244 85777710 - MGP_CBAJ_P0041342 Sun2 protein_coding protein_coding MGP_CBAJ_T0041343.1 MGP_CBAJ_G0021787.1 mouse_genomes_project 15 85775326 85777698 - MGP_CBAJ_P0041343 Sun2 protein_coding protein_coding MGP_CBAJ_T0041344.1 MGP_CBAJ_G0021787.1 mouse_genomes_project 15 85775433 85777687 - MGP_CBAJ_P0041344 Sun2 protein_coding protein_coding MGP_CBAJ_T0040223.1 MGP_CBAJ_G0021434.1 mouse_genomes_project 15 8076710 8093428 - MGP_CBAJ_P0040223 Brix1 protein_coding protein_coding MGP_CBAJ_T0040224.1 MGP_CBAJ_G0021434.1 mouse_genomes_project 15 8083861 8092866 - MGP_CBAJ_P0040224 Brix1 protein_coding protein_coding MGP_CBAJ_T0040225.1 MGP_CBAJ_G0021434.1 mouse_genomes_project 15 8084232 8093390 - MGP_CBAJ_P0040225 Brix1 protein_coding protein_coding MGP_CBAJ_T0040226.1 MGP_CBAJ_G0021434.1 mouse_genomes_project 15 8084674 8093368 - MGP_CBAJ_P0040226 Brix1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040244.1 MGP_CBAJ_G0021443.1 mouse_genomes_project 15 9114370 9130364 - MGP_CBAJ_P0040244 Tars protein_coding protein_coding MGP_CBAJ_T0042429.1 MGP_CBAJ_G0022125.1 mouse_genomes_project 15 112630178 112648094 - MGP_CBAJ_P0042429 Calcoco1 protein_coding protein_coding MGP_CBAJ_T0042430.1 MGP_CBAJ_G0022125.1 mouse_genomes_project 15 112630371 112633302 - MGP_CBAJ_P0042430 Calcoco1 protein_coding protein_coding MGP_CBAJ_T0042431.1 MGP_CBAJ_G0022125.1 mouse_genomes_project 15 112630984 112648047 - MGP_CBAJ_P0042431 Calcoco1 protein_coding protein_coding MGP_CBAJ_T0042432.1 MGP_CBAJ_G0022125.1 mouse_genomes_project 15 112636140 112641712 - Calcoco1 protein_coding retained_intron MGP_CBAJ_T0012920.1 MGP_CBAJ_G0011032.1 mouse_genomes_project 15 73420927 73421200 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0009921.1 MGP_CBAJ_G0008059.1 mouse_genomes_project 15 41539973 41540044 - Gm25958 miRNA miRNA MGP_CBAJ_T0041731.1 MGP_CBAJ_G0021907.1 mouse_genomes_project 15 96147599 96148967 + MGP_CBAJ_P0041731 Zdhhc25 protein_coding protein_coding MGP_CBAJ_T0042042.1 MGP_CBAJ_G0021997.1 mouse_genomes_project 15 107335113 107350392 + MGP_CBAJ_P0042042 1700031M16Rik protein_coding protein_coding MGP_CBAJ_T0042043.1 MGP_CBAJ_G0021997.1 mouse_genomes_project 15 107335120 107353086 + MGP_CBAJ_P0042043 1700031M16Rik protein_coding protein_coding MGP_CBAJ_T0042044.1 MGP_CBAJ_G0021997.1 mouse_genomes_project 15 107335139 107349603 + 1700031M16Rik protein_coding processed_transcript MGP_CBAJ_T0042045.1 MGP_CBAJ_G0021997.1 mouse_genomes_project 15 107335139 107352206 + 1700031M16Rik protein_coding processed_transcript MGP_CBAJ_T0042046.1 MGP_CBAJ_G0021997.1 mouse_genomes_project 15 107335139 107352206 + 1700031M16Rik protein_coding processed_transcript MGP_CBAJ_T0042047.1 MGP_CBAJ_G0021997.1 mouse_genomes_project 15 107335139 107352957 + MGP_CBAJ_P0042047 1700031M16Rik protein_coding protein_coding MGP_CBAJ_T0042048.1 MGP_CBAJ_G0021997.1 mouse_genomes_project 15 107335139 107353090 + MGP_CBAJ_P0042048 1700031M16Rik protein_coding protein_coding MGP_CBAJ_T0041215.1 MGP_CBAJ_G0021753.1 mouse_genomes_project 15 84515904 84567109 - MGP_CBAJ_P0041215 Elfn2 protein_coding protein_coding MGP_CBAJ_T0041878.1 MGP_CBAJ_G0021944.1 mouse_genomes_project 15 97522725 97587213 - MGP_CBAJ_P0041878 Syt10 protein_coding protein_coding MGP_CBAJ_T0040592.1 MGP_CBAJ_G0021569.1 mouse_genomes_project 15 59955368 59992052 - MGP_CBAJ_P0040592 Has2 protein_coding protein_coding MGP_CBAJ_T0041677.1 MGP_CBAJ_G0021885.1 mouse_genomes_project 15 91876378 91885959 - MGP_CBAJ_P0041677 Gm29666 protein_coding protein_coding MGP_CBAJ_T0040304.1 MGP_CBAJ_G0021462.1 mouse_genomes_project 15 25438920 25645640 + MGP_CBAJ_P0040304 Myo10 protein_coding protein_coding MGP_CBAJ_T0040305.1 MGP_CBAJ_G0021462.1 mouse_genomes_project 15 25438938 25611855 + MGP_CBAJ_P0040305 Myo10 protein_coding protein_coding MGP_CBAJ_T0040306.1 MGP_CBAJ_G0021462.1 mouse_genomes_project 15 25438944 25526819 + Myo10 protein_coding retained_intron MGP_CBAJ_T0040307.1 MGP_CBAJ_G0021462.1 mouse_genomes_project 15 25496087 25551109 + Myo10 protein_coding processed_transcript MGP_CBAJ_T0040308.1 MGP_CBAJ_G0021462.1 mouse_genomes_project 15 25541161 25551160 + Myo10 protein_coding retained_intron MGP_CBAJ_T0040309.1 MGP_CBAJ_G0021462.1 mouse_genomes_project 15 25569577 25613285 + MGP_CBAJ_P0040309 Myo10 protein_coding protein_coding MGP_CBAJ_T0040310.1 MGP_CBAJ_G0021462.1 mouse_genomes_project 15 25585298 25611865 + MGP_CBAJ_P0040310 Myo10 protein_coding protein_coding MGP_CBAJ_T0040311.1 MGP_CBAJ_G0021462.1 mouse_genomes_project 15 25591072 25608399 + MGP_CBAJ_P0040311 Myo10 protein_coding protein_coding MGP_CBAJ_T0040312.1 MGP_CBAJ_G0021462.1 mouse_genomes_project 15 25591092 25612500 + MGP_CBAJ_P0040312 Myo10 protein_coding protein_coding MGP_CBAJ_T0040313.1 MGP_CBAJ_G0021462.1 mouse_genomes_project 15 25600865 25608648 + MGP_CBAJ_P0040313 Myo10 protein_coding protein_coding MGP_CBAJ_T0040314.1 MGP_CBAJ_G0021462.1 mouse_genomes_project 15 25606287 25613148 + MGP_CBAJ_P0040314 Myo10 protein_coding protein_coding MGP_CBAJ_T0040315.1 MGP_CBAJ_G0021462.1 mouse_genomes_project 15 25606606 25645646 + MGP_CBAJ_P0040315 Myo10 protein_coding protein_coding MGP_CBAJ_T0040316.1 MGP_CBAJ_G0021462.1 mouse_genomes_project 15 25612280 25613459 + Myo10 protein_coding retained_intron MGP_CBAJ_T0041944.1 MGP_CBAJ_G0021963.1 mouse_genomes_project 15 102919924 102932648 - MGP_CBAJ_P0041944 Twf1 protein_coding protein_coding MGP_CBAJ_T0041945.1 MGP_CBAJ_G0021963.1 mouse_genomes_project 15 102922414 102928226 - Twf1 protein_coding processed_transcript MGP_CBAJ_T0041946.1 MGP_CBAJ_G0021963.1 mouse_genomes_project 15 102923768 102924135 - Twf1 protein_coding retained_intron MGP_CBAJ_T0041947.1 MGP_CBAJ_G0021963.1 mouse_genomes_project 15 102927191 102932658 - MGP_CBAJ_P0041947 Twf1 protein_coding protein_coding MGP_CBAJ_T0041960.1 MGP_CBAJ_G0021971.1 mouse_genomes_project 15 105004243 105057970 - MGP_CBAJ_P0041960 Scaf11 protein_coding unknown_likely_coding MGP_CBAJ_T0041961.1 MGP_CBAJ_G0021971.1 mouse_genomes_project 15 105004245 105058125 - MGP_CBAJ_P0041961 Scaf11 protein_coding protein_coding MGP_CBAJ_T0003523.1 MGP_CBAJ_G0003196.1 mouse_genomes_project 15 38398485 38399779 + Gm28221 antisense antisense MGP_CBAJ_T0042017.1 MGP_CBAJ_G0021986.1 mouse_genomes_project 15 106873606 106929524 - MGP_CBAJ_P0042017 Senp1 protein_coding protein_coding MGP_CBAJ_T0042018.1 MGP_CBAJ_G0021986.1 mouse_genomes_project 15 106874002 106901098 - Senp1 protein_coding retained_intron MGP_CBAJ_T0042019.1 MGP_CBAJ_G0021986.1 mouse_genomes_project 15 106874163 106930394 - MGP_CBAJ_P0042019 Senp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042020.1 MGP_CBAJ_G0021986.1 mouse_genomes_project 15 106874503 106930076 - MGP_CBAJ_P0042020 Senp1 protein_coding protein_coding MGP_CBAJ_T0042021.1 MGP_CBAJ_G0021986.1 mouse_genomes_project 15 106875658 106883529 - Senp1 protein_coding processed_transcript MGP_CBAJ_T0042022.1 MGP_CBAJ_G0021986.1 mouse_genomes_project 15 106899976 106930195 - Senp1 protein_coding retained_intron MGP_CBAJ_T0042023.1 MGP_CBAJ_G0021986.1 mouse_genomes_project 15 106921900 106924400 - MGP_CBAJ_P0042023 Senp1 protein_coding protein_coding MGP_CBAJ_T0042024.1 MGP_CBAJ_G0021986.1 mouse_genomes_project 15 106925412 106930130 - Senp1 protein_coding processed_transcript MGP_CBAJ_T0042025.1 MGP_CBAJ_G0021986.1 mouse_genomes_project 15 106926046 106929712 - Senp1 protein_coding processed_transcript MGP_CBAJ_T0098912.1 MGP_CBAJ_G0037167.1 mouse_genomes_project 15 82801481 82801627 - Gm24056 snRNA snRNA MGP_CBAJ_T0041056.1 MGP_CBAJ_G0021703.1 mouse_genomes_project 15 81996079 81999096 - MGP_CBAJ_P0041056 Fbxl6 protein_coding protein_coding MGP_CBAJ_T0098882.1 MGP_CBAJ_G0037137.1 mouse_genomes_project 15 16775068 16775175 - Gm24713 snRNA snRNA MGP_CBAJ_T0040546.1 MGP_CBAJ_G0021553.1 mouse_genomes_project 15 56060085 56368552 - MGP_CBAJ_P0040546 Ext1 protein_coding protein_coding MGP_CBAJ_T0040547.1 MGP_CBAJ_G0021553.1 mouse_genomes_project 15 56064713 56368052 - MGP_CBAJ_P0040547 Ext1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040548.1 MGP_CBAJ_G0021553.1 mouse_genomes_project 15 56080982 56210151 - MGP_CBAJ_P0040548 Ext1 protein_coding protein_coding MGP_CBAJ_T0040549.1 MGP_CBAJ_G0021553.1 mouse_genomes_project 15 56087752 56105625 - Ext1 protein_coding retained_intron MGP_CBAJ_T0011257.1 MGP_CBAJ_G0009395.1 mouse_genomes_project 15 9790280 9790540 + Gm24074 misc_RNA misc_RNA MGP_CBAJ_T0040628.1 MGP_CBAJ_G0021584.1 mouse_genomes_project 15 62020082 62188618 + MGP_CBAJ_P0040628 Fer1l6 protein_coding protein_coding MGP_CBAJ_T0040629.1 MGP_CBAJ_G0021584.1 mouse_genomes_project 15 62164261 62172984 + Fer1l6 protein_coding processed_transcript MGP_CBAJ_T0040630.1 MGP_CBAJ_G0021584.1 mouse_genomes_project 15 62174371 62190780 + Fer1l6 protein_coding retained_intron MGP_CBAJ_T0041880.1 MGP_CBAJ_G0021946.1 mouse_genomes_project 15 98308974 98508409 - MGP_CBAJ_P0041880 Cpne8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041881.1 MGP_CBAJ_G0021946.1 mouse_genomes_project 15 98310773 98508470 - MGP_CBAJ_P0041881 Cpne8 protein_coding protein_coding MGP_CBAJ_T0041882.1 MGP_CBAJ_G0021946.1 mouse_genomes_project 15 98474071 98508414 - Cpne8 protein_coding retained_intron MGP_CBAJ_T0012893.1 MGP_CBAJ_G0011005.1 mouse_genomes_project 15 11449031 11452023 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0040512.1 MGP_CBAJ_G0021540.1 mouse_genomes_project 15 46271194 46280794 + MGP_CBAJ_P0040512 Eny2 protein_coding protein_coding MGP_CBAJ_T0098909.1 MGP_CBAJ_G0037164.1 mouse_genomes_project 15 78769066 78769193 + Gm22106 snRNA snRNA MGP_CBAJ_T0040442.1 MGP_CBAJ_G0021512.1 mouse_genomes_project 15 38397455 38900500 - MGP_CBAJ_P0040442 Ncald protein_coding protein_coding MGP_CBAJ_T0040443.1 MGP_CBAJ_G0021512.1 mouse_genomes_project 15 38397455 38900933 - MGP_CBAJ_P0040443 Ncald protein_coding protein_coding MGP_CBAJ_T0040444.1 MGP_CBAJ_G0021512.1 mouse_genomes_project 15 38397498 38504777 - MGP_CBAJ_P0040444 Ncald protein_coding protein_coding MGP_CBAJ_T0040445.1 MGP_CBAJ_G0021512.1 mouse_genomes_project 15 38397547 38504766 - MGP_CBAJ_P0040445 Ncald protein_coding protein_coding MGP_CBAJ_T0040446.1 MGP_CBAJ_G0021512.1 mouse_genomes_project 15 38399904 38503958 - MGP_CBAJ_P0040446 Ncald protein_coding protein_coding MGP_CBAJ_T0040447.1 MGP_CBAJ_G0021512.1 mouse_genomes_project 15 38400168 38829337 - MGP_CBAJ_P0040447 Ncald protein_coding protein_coding MGP_CBAJ_T0040448.1 MGP_CBAJ_G0021512.1 mouse_genomes_project 15 38403391 38900500 - MGP_CBAJ_P0040448 Ncald protein_coding protein_coding MGP_CBAJ_T0040449.1 MGP_CBAJ_G0021512.1 mouse_genomes_project 15 38411466 38504749 - Ncald protein_coding processed_transcript MGP_CBAJ_T0040450.1 MGP_CBAJ_G0021512.1 mouse_genomes_project 15 38431515 38901070 - MGP_CBAJ_P0040450 Ncald protein_coding protein_coding MGP_CBAJ_T0040452.1 MGP_CBAJ_G0021512.1 mouse_genomes_project 15 38478013 38829038 - Ncald protein_coding processed_transcript MGP_CBAJ_T0040453.1 MGP_CBAJ_G0021512.1 mouse_genomes_project 15 38694101 38829337 - Ncald protein_coding processed_transcript MGP_CBAJ_T0040454.1 MGP_CBAJ_G0021512.1 mouse_genomes_project 15 38695468 38900739 - Ncald protein_coding processed_transcript MGP_CBAJ_T0040625.1 MGP_CBAJ_G0021581.1 mouse_genomes_project 15 61785172 61798663 - MGP_CBAJ_P0040625 Klhl38 protein_coding protein_coding MGP_CBAJ_T0040605.1 MGP_CBAJ_G0021574.1 mouse_genomes_project 15 61434322 61460214 + MGP_CBAJ_P0040605 Fam83a protein_coding protein_coding MGP_CBAJ_T0040606.1 MGP_CBAJ_G0021574.1 mouse_genomes_project 15 61434813 61444624 + MGP_CBAJ_P0040606 Fam83a protein_coding protein_coding MGP_CBAJ_T0040607.1 MGP_CBAJ_G0021574.1 mouse_genomes_project 15 61449911 61459252 + Fam83a protein_coding processed_transcript MGP_CBAJ_T0000900.1 MGP_CBAJ_G0000835.1 mouse_genomes_project 15 10546559 10548844 - TEC TEC MGP_CBAJ_T0040997.1 MGP_CBAJ_G0021691.1 mouse_genomes_project 15 81775652 81778064 + MGP_CBAJ_P0040997 Cyc1 protein_coding protein_coding MGP_CBAJ_T0042375.1 MGP_CBAJ_G0022115.1 mouse_genomes_project 15 112327150 112336369 + MGP_CBAJ_P0042375 Amhr2 protein_coding protein_coding MGP_CBAJ_T0042376.1 MGP_CBAJ_G0022115.1 mouse_genomes_project 15 112333901 112336284 + MGP_CBAJ_P0042376 Amhr2 protein_coding protein_coding MGP_CBAJ_T0042377.1 MGP_CBAJ_G0022115.1 mouse_genomes_project 15 112334065 112334614 + Amhr2 protein_coding retained_intron MGP_CBAJ_T0040555.1 MGP_CBAJ_G0021556.1 mouse_genomes_project 15 57348445 57377768 - MGP_CBAJ_P0040555 Tnfrsf11b protein_coding protein_coding MGP_CBAJ_T0011260.1 MGP_CBAJ_G0009398.1 mouse_genomes_project 15 44927863 44928160 - Gm22037 misc_RNA misc_RNA MGP_CBAJ_T0012942.1 MGP_CBAJ_G0011054.1 mouse_genomes_project 15 109187892 109188162 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0040400.1 MGP_CBAJ_G0021498.1 mouse_genomes_project 15 36104923 36739453 + MGP_CBAJ_P0040400 Vps13b protein_coding protein_coding MGP_CBAJ_T0040060.1 MGP_CBAJ_G0021392.1 mouse_genomes_project 15 149343 156614 + MGP_CBAJ_P0040060 protein_coding protein_coding MGP_CBAJ_T0040061.1 MGP_CBAJ_G0021392.1 mouse_genomes_project 15 151563 161340 + MGP_CBAJ_P0040061 protein_coding protein_coding MGP_CBAJ_T0040062.1 MGP_CBAJ_G0021392.1 mouse_genomes_project 15 151607 156567 + MGP_CBAJ_P0040062 protein_coding protein_coding MGP_CBAJ_T0040063.1 MGP_CBAJ_G0021392.1 mouse_genomes_project 15 151717 161339 + MGP_CBAJ_P0040063 protein_coding protein_coding MGP_CBAJ_T0040064.1 MGP_CBAJ_G0021392.1 mouse_genomes_project 15 151794 156496 + MGP_CBAJ_P0040064 protein_coding protein_coding MGP_CBAJ_T0040065.1 MGP_CBAJ_G0021392.1 mouse_genomes_project 15 151795 155954 + protein_coding retained_intron MGP_CBAJ_T0040066.1 MGP_CBAJ_G0021392.1 mouse_genomes_project 15 152916 158103 + MGP_CBAJ_P0040066 protein_coding protein_coding MGP_CBAJ_T0040383.1 MGP_CBAJ_G0021492.1 mouse_genomes_project 15 35112822 35125380 - MGP_CBAJ_P0040383 Rida protein_coding protein_coding MGP_CBAJ_T0040384.1 MGP_CBAJ_G0021492.1 mouse_genomes_project 15 35112825 35119931 - Rida protein_coding retained_intron MGP_CBAJ_T0040385.1 MGP_CBAJ_G0021492.1 mouse_genomes_project 15 35113695 35125296 - Rida protein_coding retained_intron MGP_CBAJ_T0040386.1 MGP_CBAJ_G0021492.1 mouse_genomes_project 15 35114405 35119817 - Rida protein_coding processed_transcript MGP_CBAJ_T0041916.1 MGP_CBAJ_G0021956.1 mouse_genomes_project 15 101473165 101532051 - MGP_CBAJ_P0041916 Yaf2 protein_coding protein_coding MGP_CBAJ_T0041917.1 MGP_CBAJ_G0021956.1 mouse_genomes_project 15 101473168 101532178 - Yaf2 protein_coding processed_transcript MGP_CBAJ_T0041953.1 MGP_CBAJ_G0021968.1 mouse_genomes_project 15 104300644 104514524 + MGP_CBAJ_P0041953 Ano6 protein_coding protein_coding MGP_CBAJ_T0041954.1 MGP_CBAJ_G0021968.1 mouse_genomes_project 15 104300785 104514537 + MGP_CBAJ_P0041954 Ano6 protein_coding unknown_likely_coding MGP_CBAJ_T0040193.1 MGP_CBAJ_G0021427.1 mouse_genomes_project 15 6924784 6951124 + MGP_CBAJ_P0040193 Capsl protein_coding protein_coding MGP_CBAJ_T0040780.1 MGP_CBAJ_G0021630.1 mouse_genomes_project 15 78804205 78878846 - MGP_CBAJ_P0040780 Mroh5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040781.1 MGP_CBAJ_G0021630.1 mouse_genomes_project 15 78823736 78826376 - Mroh5 protein_coding processed_transcript MGP_CBAJ_T0040782.1 MGP_CBAJ_G0021630.1 mouse_genomes_project 15 78831928 78887523 - MGP_CBAJ_P0040782 Mroh5 protein_coding protein_coding MGP_CBAJ_T0040783.1 MGP_CBAJ_G0021630.1 mouse_genomes_project 15 78832452 78865472 - MGP_CBAJ_P0040783 Mroh5 protein_coding protein_coding MGP_CBAJ_T0040784.1 MGP_CBAJ_G0021630.1 mouse_genomes_project 15 78842140 78887551 - Mroh5 protein_coding retained_intron MGP_CBAJ_T0041404.1 MGP_CBAJ_G0021805.1 mouse_genomes_project 15 86870862 86901385 + MGP_CBAJ_P0041404 Fam83f protein_coding protein_coding MGP_CBAJ_T0003546.1 MGP_CBAJ_G0003214.1 mouse_genomes_project 15 89741039 89744885 - Gm17206 antisense antisense MGP_CBAJ_T0040455.1 MGP_CBAJ_G0021514.1 mouse_genomes_project 15 39032399 39072254 - MGP_CBAJ_P0040455 Rrm2b protein_coding protein_coding MGP_CBAJ_T0040456.1 MGP_CBAJ_G0021514.1 mouse_genomes_project 15 39039386 39072042 - MGP_CBAJ_P0040456 Rrm2b protein_coding nonsense_mediated_decay MGP_CBAJ_T0040457.1 MGP_CBAJ_G0021514.1 mouse_genomes_project 15 39039386 39072042 - MGP_CBAJ_P0040457 Rrm2b protein_coding protein_coding MGP_CBAJ_T0040458.1 MGP_CBAJ_G0021514.1 mouse_genomes_project 15 39043603 39072080 - MGP_CBAJ_P0040458 Rrm2b protein_coding nonsense_mediated_decay MGP_CBAJ_T0040459.1 MGP_CBAJ_G0021514.1 mouse_genomes_project 15 39056325 39066287 - Rrm2b protein_coding retained_intron MGP_CBAJ_T0040460.1 MGP_CBAJ_G0021514.1 mouse_genomes_project 15 39056430 39072000 - MGP_CBAJ_P0040460 Rrm2b protein_coding protein_coding MGP_CBAJ_T0040461.1 MGP_CBAJ_G0021514.1 mouse_genomes_project 15 39058029 39072469 - MGP_CBAJ_P0040461 Rrm2b protein_coding protein_coding MGP_CBAJ_T0041126.1 MGP_CBAJ_G0021720.1 mouse_genomes_project 15 82395107 82415453 + MGP_CBAJ_P0041126 Zfp7 protein_coding protein_coding MGP_CBAJ_T0040633.1 MGP_CBAJ_G0021587.1 mouse_genomes_project 15 62419568 62423701 + MGP_CBAJ_P0040633 Trmt12 protein_coding protein_coding MGP_CBAJ_T0003529.1 MGP_CBAJ_G0003202.1 mouse_genomes_project 15 70618146 70621481 + Gm27242 antisense antisense MGP_CBAJ_T0012887.1 MGP_CBAJ_G0010999.1 mouse_genomes_project 15 2256653 2257888 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011263.1 MGP_CBAJ_G0009401.1 mouse_genomes_project 15 65999522 65999721 + Gm27782 misc_RNA misc_RNA MGP_CBAJ_T0041477.1 MGP_CBAJ_G0021819.1 mouse_genomes_project 15 88009011 88028245 - MGP_CBAJ_P0041477 Chadl protein_coding nonsense_mediated_decay MGP_CBAJ_T0041480.1 MGP_CBAJ_G0021819.1 mouse_genomes_project 15 88020422 88031504 - MGP_CBAJ_P0041480 Chadl protein_coding protein_coding MGP_CBAJ_T0041481.1 MGP_CBAJ_G0021819.1 mouse_genomes_project 15 88020438 88028424 - MGP_CBAJ_P0041481 Chadl protein_coding nonsense_mediated_decay MGP_CBAJ_T0041389.1 MGP_CBAJ_G0021797.1 mouse_genomes_project 15 86267491 86298583 + MGP_CBAJ_P0041389 Tab1 protein_coding protein_coding MGP_CBAJ_T0101654.1 MGP_CBAJ_G0039685.1 mouse_genomes_project 15 80164517 80186964 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0041043.1 MGP_CBAJ_G0021699.1 mouse_genomes_project 15 81902257 81904288 + MGP_CBAJ_P0041043 Scx protein_coding protein_coding MGP_CBAJ_T0012939.1 MGP_CBAJ_G0011051.1 mouse_genomes_project 15 108398280 108408298 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0041682.1 MGP_CBAJ_G0021888.1 mouse_genomes_project 15 91994266 91999686 + MGP_CBAJ_P0041682 Upk3a protein_coding protein_coding MGP_CBAJ_T0040875.1 MGP_CBAJ_G0021661.1 mouse_genomes_project 15 80991880 81000491 + MGP_CBAJ_P0040875 Zfp41 protein_coding protein_coding MGP_CBAJ_T0040876.1 MGP_CBAJ_G0021661.1 mouse_genomes_project 15 80991885 81000484 + MGP_CBAJ_P0040876 Zfp41 protein_coding protein_coding MGP_CBAJ_T0040877.1 MGP_CBAJ_G0021661.1 mouse_genomes_project 15 80991925 80993835 + MGP_CBAJ_P0040877 Zfp41 protein_coding protein_coding MGP_CBAJ_T0040878.1 MGP_CBAJ_G0021661.1 mouse_genomes_project 15 80996901 80999021 + Zfp41 protein_coding processed_transcript MGP_CBAJ_T0042049.1 MGP_CBAJ_G0021998.1 mouse_genomes_project 15 107380435 107381363 + MGP_CBAJ_P0042049 Olfr282 protein_coding protein_coding MGP_CBAJ_T0041649.1 MGP_CBAJ_G0021876.1 mouse_genomes_project 15 91008147 91038853 + MGP_CBAJ_P0041649 Pnpla3 protein_coding protein_coding MGP_CBAJ_T0041832.1 MGP_CBAJ_G0021932.1 mouse_genomes_project 15 97037322 97042519 - MGP_CBAJ_P0041832 Tymp protein_coding protein_coding MGP_CBAJ_T0012894.1 MGP_CBAJ_G0011006.1 mouse_genomes_project 15 11449031 11452023 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098923.1 MGP_CBAJ_G0037178.1 mouse_genomes_project 15 101539324 101539428 + Gm26371 snRNA snRNA MGP_CBAJ_T0040507.1 MGP_CBAJ_G0021537.1 mouse_genomes_project 15 45639063 45642404 - MGP_CBAJ_P0040507 Tmem74 protein_coding protein_coding MGP_CBAJ_T0041335.1 MGP_CBAJ_G0021786.1 mouse_genomes_project 15 85729412 85753794 + MGP_CBAJ_P0041335 Gtpbp1 protein_coding protein_coding MGP_CBAJ_T0040472.1 MGP_CBAJ_G0021519.1 mouse_genomes_project 15 39865859 39900559 + MGP_CBAJ_P0040472 Atp6v1c1 protein_coding protein_coding MGP_CBAJ_T0041506.1 MGP_CBAJ_G0021827.1 mouse_genomes_project 15 88284116 88295309 - MGP_CBAJ_P0041506 Polr3h protein_coding protein_coding MGP_CBAJ_T0040476.1 MGP_CBAJ_G0021522.1 mouse_genomes_project 15 40295054 40306596 + MGP_CBAJ_P0040476 Cthrc1 protein_coding protein_coding MGP_CBAJ_T0040477.1 MGP_CBAJ_G0021522.1 mouse_genomes_project 15 40295203 40299696 + Cthrc1 protein_coding processed_transcript MGP_CBAJ_T0040478.1 MGP_CBAJ_G0021522.1 mouse_genomes_project 15 40303546 40306598 + Cthrc1 protein_coding retained_intron MGP_CBAJ_T0040964.1 MGP_CBAJ_G0021684.1 mouse_genomes_project 15 81645355 81647905 - MGP_CBAJ_P0040964 Parp10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040965.1 MGP_CBAJ_G0021684.1 mouse_genomes_project 15 81647184 81659312 - Parp10 protein_coding retained_intron MGP_CBAJ_T0040966.1 MGP_CBAJ_G0021684.1 mouse_genomes_project 15 81647184 81659298 - MGP_CBAJ_P0040966 Parp10 protein_coding protein_coding MGP_CBAJ_T0040967.1 MGP_CBAJ_G0021684.1 mouse_genomes_project 15 81647184 81659319 - MGP_CBAJ_P0040967 Parp10 protein_coding protein_coding MGP_CBAJ_T0040968.1 MGP_CBAJ_G0021684.1 mouse_genomes_project 15 81647571 81648435 - Parp10 protein_coding processed_transcript MGP_CBAJ_T0040969.1 MGP_CBAJ_G0021684.1 mouse_genomes_project 15 81647920 81648655 - Parp10 protein_coding retained_intron MGP_CBAJ_T0042247.1 MGP_CBAJ_G0022066.1 mouse_genomes_project 15 110269323 110282339 + MGP_CBAJ_P0042247 Slc4a8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042248.1 MGP_CBAJ_G0022066.1 mouse_genomes_project 15 110269342 110282219 + Slc4a8 protein_coding retained_intron MGP_CBAJ_T0042249.1 MGP_CBAJ_G0022066.1 mouse_genomes_project 15 110269384 110334411 + MGP_CBAJ_P0042249 Slc4a8 protein_coding protein_coding MGP_CBAJ_T0042250.1 MGP_CBAJ_G0022066.1 mouse_genomes_project 15 110317768 110321311 + Slc4a8 protein_coding retained_intron MGP_CBAJ_T0042251.1 MGP_CBAJ_G0022066.1 mouse_genomes_project 15 110327215 110331062 + Slc4a8 protein_coding processed_transcript MGP_CBAJ_T0042252.1 MGP_CBAJ_G0022066.1 mouse_genomes_project 15 110329386 110330833 + Slc4a8 protein_coding retained_intron MGP_CBAJ_T0041248.1 MGP_CBAJ_G0021763.1 mouse_genomes_project 15 84944845 84947132 + MGP_CBAJ_P0041248 H1f0 protein_coding protein_coding MGP_CBAJ_T0042170.1 MGP_CBAJ_G0022039.1 mouse_genomes_project 15 108916119 108952921 + MGP_CBAJ_P0042170 Asic1 protein_coding protein_coding MGP_CBAJ_T0040168.1 MGP_CBAJ_G0021421.1 mouse_genomes_project 15 6439106 6502784 + MGP_CBAJ_P0040168 Ranbp3l protein_coding protein_coding MGP_CBAJ_T0040169.1 MGP_CBAJ_G0021421.1 mouse_genomes_project 15 6439106 6471540 + MGP_CBAJ_P0040169 Ranbp3l protein_coding protein_coding MGP_CBAJ_T0040170.1 MGP_CBAJ_G0021421.1 mouse_genomes_project 15 6439106 6501239 + MGP_CBAJ_P0040170 Ranbp3l protein_coding unknown_likely_coding MGP_CBAJ_T0040406.1 MGP_CBAJ_G0021500.1 mouse_genomes_project 15 36824716 36982770 - MGP_CBAJ_P0040406 Rgs22 protein_coding protein_coding MGP_CBAJ_T0040407.1 MGP_CBAJ_G0021500.1 mouse_genomes_project 15 36824807 36854665 - MGP_CBAJ_P0040407 Rgs22 protein_coding protein_coding MGP_CBAJ_T0040408.1 MGP_CBAJ_G0021500.1 mouse_genomes_project 15 36825570 36948937 - MGP_CBAJ_P0040408 Rgs22 protein_coding protein_coding MGP_CBAJ_T0040409.1 MGP_CBAJ_G0021500.1 mouse_genomes_project 15 36862886 36922239 - MGP_CBAJ_P0040409 Rgs22 protein_coding protein_coding MGP_CBAJ_T0040410.1 MGP_CBAJ_G0021500.1 mouse_genomes_project 15 36981600 36982755 - Rgs22 protein_coding retained_intron MGP_CBAJ_T0041390.1 MGP_CBAJ_G0021798.1 mouse_genomes_project 15 86320278 86361657 + MGP_CBAJ_P0041390 Mgat3 protein_coding protein_coding MGP_CBAJ_T0041572.1 MGP_CBAJ_G0021857.1 mouse_genomes_project 15 89407185 89526250 - MGP_CBAJ_P0041572 Tcf20 protein_coding protein_coding MGP_CBAJ_T0041573.1 MGP_CBAJ_G0021857.1 mouse_genomes_project 15 89407185 89526250 - MGP_CBAJ_P0041573 Tcf20 protein_coding protein_coding MGP_CBAJ_T0040931.1 MGP_CBAJ_G0021679.1 mouse_genomes_project 15 81454653 81477280 - MGP_CBAJ_P0040931 Scrib protein_coding protein_coding MGP_CBAJ_T0040932.1 MGP_CBAJ_G0021679.1 mouse_genomes_project 15 81454653 81470215 - MGP_CBAJ_P0040932 Scrib protein_coding protein_coding MGP_CBAJ_T0040933.1 MGP_CBAJ_G0021679.1 mouse_genomes_project 15 81454653 81477250 - MGP_CBAJ_P0040933 Scrib protein_coding protein_coding MGP_CBAJ_T0040934.1 MGP_CBAJ_G0021679.1 mouse_genomes_project 15 81454653 81477250 - MGP_CBAJ_P0040934 Scrib protein_coding protein_coding MGP_CBAJ_T0040935.1 MGP_CBAJ_G0021679.1 mouse_genomes_project 15 81456435 81458282 - MGP_CBAJ_P0040935 Scrib protein_coding protein_coding MGP_CBAJ_T0040936.1 MGP_CBAJ_G0021679.1 mouse_genomes_project 15 81456698 81458282 - MGP_CBAJ_P0040936 Scrib protein_coding protein_coding MGP_CBAJ_T0009974.1 MGP_CBAJ_G0008112.1 mouse_genomes_project 15 111260074 111260212 + Gm44393 miRNA miRNA MGP_CBAJ_T0009950.1 MGP_CBAJ_G0008088.1 mouse_genomes_project 15 89049932 89049992 + Gm27825 miRNA miRNA MGP_CBAJ_T0003531.1 MGP_CBAJ_G0003204.1 mouse_genomes_project 15 71315788 71317289 + Gm17035 antisense antisense MGP_CBAJ_T0098929.1 MGP_CBAJ_G0037184.1 mouse_genomes_project 15 112244953 112245057 + Gm23590 snRNA snRNA MGP_CBAJ_T0040593.1 MGP_CBAJ_G0021570.1 mouse_genomes_project 15 60600783 60633577 - MGP_CBAJ_P0040593 Slc22a22 protein_coding protein_coding MGP_CBAJ_T0040594.1 MGP_CBAJ_G0021570.1 mouse_genomes_project 15 60600787 60852890 - MGP_CBAJ_P0040594 Slc22a22 protein_coding protein_coding MGP_CBAJ_T0017214.1 MGP_CBAJ_G0015045.1 mouse_genomes_project 15 85278262 85279630 + Gm20420 processed_transcript processed_transcript MGP_CBAJ_T0011259.1 MGP_CBAJ_G0009397.1 mouse_genomes_project 15 36842883 36843138 + Gm25372 misc_RNA misc_RNA MGP_CBAJ_T0042111.1 MGP_CBAJ_G0022025.1 mouse_genomes_project 15 108253779 108362241 + MGP_CBAJ_P0042111 Spats2 protein_coding protein_coding MGP_CBAJ_T0042442.1 MGP_CBAJ_G0022133.1 mouse_genomes_project 15 112964855 112977354 + Hoxc6 protein_coding processed_transcript MGP_CBAJ_T0042443.1 MGP_CBAJ_G0022133.1 mouse_genomes_project 15 112967128 112976592 + Hoxc6 protein_coding processed_transcript MGP_CBAJ_T0042444.1 MGP_CBAJ_G0022133.1 mouse_genomes_project 15 112976158 112978467 + MGP_CBAJ_P0042444 Hoxc6 protein_coding protein_coding MGP_CBAJ_T0040184.1 MGP_CBAJ_G0021424.1 mouse_genomes_project 15 6587256 6658943 + MGP_CBAJ_P0040184 Lmbrd2 protein_coding protein_coding MGP_CBAJ_T0009968.1 MGP_CBAJ_G0008106.1 mouse_genomes_project 15 104997486 104997578 + Gm25397 miRNA miRNA MGP_CBAJ_T0041100.1 MGP_CBAJ_G0021715.1 mouse_genomes_project 15 82188455 82195231 - MGP_CBAJ_P0041100 Recql4 protein_coding protein_coding MGP_CBAJ_T0041457.1 MGP_CBAJ_G0021816.1 mouse_genomes_project 15 87751720 87767623 + MGP_CBAJ_P0041457 Rbx1 protein_coding protein_coding MGP_CBAJ_T0040803.1 MGP_CBAJ_G0021634.1 mouse_genomes_project 15 79790731 79794217 - MGP_CBAJ_P0040803 Arc protein_coding protein_coding MGP_CBAJ_T0040804.1 MGP_CBAJ_G0021634.1 mouse_genomes_project 15 79790731 79794219 - MGP_CBAJ_P0040804 Arc protein_coding protein_coding MGP_CBAJ_T0000904.1 MGP_CBAJ_G0000839.1 mouse_genomes_project 15 65893115 65898344 - TEC TEC MGP_CBAJ_T0097961.1 MGP_CBAJ_G0036234.1 mouse_genomes_project 15 34099620 34099751 - Gm24476 rRNA rRNA MGP_CBAJ_T0040358.1 MGP_CBAJ_G0021483.1 mouse_genomes_project 15 33202199 33472807 + MGP_CBAJ_P0040358 Sdc2 protein_coding protein_coding MGP_CBAJ_T0040359.1 MGP_CBAJ_G0021483.1 mouse_genomes_project 15 33202250 33202782 + Sdc2 protein_coding processed_transcript MGP_CBAJ_T0040186.1 MGP_CBAJ_G0021425.1 mouse_genomes_project 15 6748771 6789862 + Ugt3a1 protein_coding processed_transcript MGP_CBAJ_T0040187.1 MGP_CBAJ_G0021425.1 mouse_genomes_project 15 6764065 6794381 + MGP_CBAJ_P0040187 Ugt3a1 protein_coding protein_coding MGP_CBAJ_T0040188.1 MGP_CBAJ_G0021425.1 mouse_genomes_project 15 6764084 6785558 + Ugt3a1 protein_coding processed_transcript MGP_CBAJ_T0040189.1 MGP_CBAJ_G0021425.1 mouse_genomes_project 15 6764086 6785480 + Ugt3a1 protein_coding processed_transcript MGP_CBAJ_T0040190.1 MGP_CBAJ_G0021425.1 mouse_genomes_project 15 6767746 6776945 + MGP_CBAJ_P0040190 Ugt3a1 protein_coding protein_coding MGP_CBAJ_T0041458.1 MGP_CBAJ_G0021817.1 mouse_genomes_project 15 87901468 87904465 + Ep300 protein_coding processed_transcript MGP_CBAJ_T0041459.1 MGP_CBAJ_G0021817.1 mouse_genomes_project 15 87901514 87970800 + MGP_CBAJ_P0041459 Ep300 protein_coding protein_coding MGP_CBAJ_T0041460.1 MGP_CBAJ_G0021817.1 mouse_genomes_project 15 87902337 87942778 + Ep300 protein_coding retained_intron MGP_CBAJ_T0041461.1 MGP_CBAJ_G0021817.1 mouse_genomes_project 15 87932056 87942078 + MGP_CBAJ_P0041461 Ep300 protein_coding protein_coding MGP_CBAJ_T0041462.1 MGP_CBAJ_G0021817.1 mouse_genomes_project 15 87932074 87935094 + Ep300 protein_coding retained_intron MGP_CBAJ_T0041463.1 MGP_CBAJ_G0021817.1 mouse_genomes_project 15 87939621 87945013 + MGP_CBAJ_P0041463 Ep300 protein_coding protein_coding MGP_CBAJ_T0041464.1 MGP_CBAJ_G0021817.1 mouse_genomes_project 15 87945984 87946423 + MGP_CBAJ_P0041464 Ep300 protein_coding protein_coding MGP_CBAJ_T0041465.1 MGP_CBAJ_G0021817.1 mouse_genomes_project 15 87952682 87959265 + Ep300 protein_coding retained_intron MGP_CBAJ_T0041466.1 MGP_CBAJ_G0021817.1 mouse_genomes_project 15 87954851 87963324 + Ep300 protein_coding retained_intron MGP_CBAJ_T0041467.1 MGP_CBAJ_G0021817.1 mouse_genomes_project 15 87963568 87967901 + Ep300 protein_coding retained_intron MGP_CBAJ_T0000912.1 MGP_CBAJ_G0000847.1 mouse_genomes_project 15 113029683 113030710 - TEC TEC MGP_CBAJ_T0042036.1 MGP_CBAJ_G0021993.1 mouse_genomes_project 15 107160990 107171531 - MGP_CBAJ_P0042036 Zfp641 protein_coding protein_coding MGP_CBAJ_T0042037.1 MGP_CBAJ_G0021993.1 mouse_genomes_project 15 107161524 107171484 - MGP_CBAJ_P0042037 Zfp641 protein_coding protein_coding MGP_CBAJ_T0040451.1 MGP_CBAJ_G0021513.1 mouse_genomes_project 15 38465055 38486225 + MGP_CBAJ_P0040451 4930447A16Rik protein_coding protein_coding MGP_CBAJ_T0042386.1 MGP_CBAJ_G0022118.1 mouse_genomes_project 15 112395278 112414472 - MGP_CBAJ_P0042386 Map3k12 protein_coding protein_coding MGP_CBAJ_T0042387.1 MGP_CBAJ_G0022118.1 mouse_genomes_project 15 112396417 112408352 - MGP_CBAJ_P0042387 Map3k12 protein_coding protein_coding MGP_CBAJ_T0042388.1 MGP_CBAJ_G0022118.1 mouse_genomes_project 15 112396667 112414700 - MGP_CBAJ_P0042388 Map3k12 protein_coding protein_coding MGP_CBAJ_T0042390.1 MGP_CBAJ_G0022118.1 mouse_genomes_project 15 112403010 112414640 - MGP_CBAJ_P0042390 Map3k12 protein_coding protein_coding MGP_CBAJ_T0042391.1 MGP_CBAJ_G0022118.1 mouse_genomes_project 15 112403072 112414611 - MGP_CBAJ_P0042391 Map3k12 protein_coding protein_coding MGP_CBAJ_T0042392.1 MGP_CBAJ_G0022118.1 mouse_genomes_project 15 112403109 112414452 - MGP_CBAJ_P0042392 Map3k12 protein_coding protein_coding MGP_CBAJ_T0042393.1 MGP_CBAJ_G0022118.1 mouse_genomes_project 15 112403758 112414448 - Map3k12 protein_coding processed_transcript MGP_CBAJ_T0042394.1 MGP_CBAJ_G0022118.1 mouse_genomes_project 15 112406755 112408444 - Map3k12 protein_coding processed_transcript MGP_CBAJ_T0041918.1 MGP_CBAJ_G0021957.1 mouse_genomes_project 15 101577309 101589500 - MGP_CBAJ_P0041918 Zcrb1 protein_coding protein_coding MGP_CBAJ_T0041919.1 MGP_CBAJ_G0021957.1 mouse_genomes_project 15 101577318 101589533 - MGP_CBAJ_P0041919 Zcrb1 protein_coding protein_coding MGP_CBAJ_T0041920.1 MGP_CBAJ_G0021957.1 mouse_genomes_project 15 101577322 101582394 - Zcrb1 protein_coding retained_intron MGP_CBAJ_T0041921.1 MGP_CBAJ_G0021957.1 mouse_genomes_project 15 101577325 101582591 - Zcrb1 protein_coding retained_intron MGP_CBAJ_T0041922.1 MGP_CBAJ_G0021957.1 mouse_genomes_project 15 101578829 101579357 - Zcrb1 protein_coding retained_intron MGP_CBAJ_T0041923.1 MGP_CBAJ_G0021957.1 mouse_genomes_project 15 101578961 101582881 - Zcrb1 protein_coding retained_intron MGP_CBAJ_T0041924.1 MGP_CBAJ_G0021957.1 mouse_genomes_project 15 101579013 101589533 - MGP_CBAJ_P0041924 Zcrb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041925.1 MGP_CBAJ_G0021957.1 mouse_genomes_project 15 101585279 101589472 - Zcrb1 protein_coding retained_intron MGP_CBAJ_T0098897.1 MGP_CBAJ_G0037152.1 mouse_genomes_project 15 55455617 55455721 + Gm23545 snRNA snRNA MGP_CBAJ_T0040538.1 MGP_CBAJ_G0021548.1 mouse_genomes_project 15 54734389 54748142 + MGP_CBAJ_P0040538 Utp23 protein_coding protein_coding MGP_CBAJ_T0040539.1 MGP_CBAJ_G0021548.1 mouse_genomes_project 15 54734438 54742879 + MGP_CBAJ_P0040539 Utp23 protein_coding protein_coding MGP_CBAJ_T0040540.1 MGP_CBAJ_G0021548.1 mouse_genomes_project 15 54734465 54742874 + MGP_CBAJ_P0040540 Utp23 protein_coding protein_coding MGP_CBAJ_T0040541.1 MGP_CBAJ_G0021548.1 mouse_genomes_project 15 54734702 54742873 + MGP_CBAJ_P0040541 Utp23 protein_coding protein_coding MGP_CBAJ_T0040970.1 MGP_CBAJ_G0021685.1 mouse_genomes_project 15 81662699 81665797 + MGP_CBAJ_P0040970 Grina protein_coding protein_coding MGP_CBAJ_T0040417.1 MGP_CBAJ_G0021506.1 mouse_genomes_project 15 37394986 37448984 - MGP_CBAJ_P0040417 Snx31 protein_coding protein_coding MGP_CBAJ_T0040418.1 MGP_CBAJ_G0021506.1 mouse_genomes_project 15 37395336 37448979 - MGP_CBAJ_P0040418 Snx31 protein_coding protein_coding MGP_CBAJ_T0040419.1 MGP_CBAJ_G0021506.1 mouse_genomes_project 15 37429606 37438005 - Snx31 protein_coding processed_transcript MGP_CBAJ_T0040420.1 MGP_CBAJ_G0021506.1 mouse_genomes_project 15 37429606 37438463 - MGP_CBAJ_P0040420 Snx31 protein_coding protein_coding MGP_CBAJ_T0040436.1 MGP_CBAJ_G0021510.1 mouse_genomes_project 15 37960139 37969919 - MGP_CBAJ_P0040436 Zfp706 protein_coding protein_coding MGP_CBAJ_T0100176.1 MGP_CBAJ_G0038431.1 mouse_genomes_project 15 74051050 74051182 - Gm24232 snoRNA snoRNA MGP_CBAJ_T0012930.1 MGP_CBAJ_G0011042.1 mouse_genomes_project 15 88004970 88005594 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006661.1 MGP_CBAJ_G0005498.1 mouse_genomes_project 15 41878714 41894670 - Gm16294 lincRNA lincRNA MGP_CBAJ_T0042244.1 MGP_CBAJ_G0022065.1 mouse_genomes_project 15 110185661 110226806 - MGP_CBAJ_P0042244 Galnt6 protein_coding protein_coding MGP_CBAJ_T0042245.1 MGP_CBAJ_G0022065.1 mouse_genomes_project 15 110185663 110226806 - MGP_CBAJ_P0042245 Galnt6 protein_coding protein_coding MGP_CBAJ_T0042246.1 MGP_CBAJ_G0022065.1 mouse_genomes_project 15 110186712 110217924 - MGP_CBAJ_P0042246 Galnt6 protein_coding protein_coding MGP_CBAJ_T0006669.1 MGP_CBAJ_G0005504.1 mouse_genomes_project 15 48714249 48735886 + 4930548G14Rik lincRNA lincRNA MGP_CBAJ_T0006670.1 MGP_CBAJ_G0005504.1 mouse_genomes_project 15 48716400 48716718 + 4930548G14Rik lincRNA lincRNA MGP_CBAJ_T0009928.1 MGP_CBAJ_G0008066.1 mouse_genomes_project 15 76727836 76727941 + miRNA miRNA MGP_CBAJ_T0098913.1 MGP_CBAJ_G0037168.1 mouse_genomes_project 15 83547834 83547934 - Gm22107 snRNA snRNA MGP_CBAJ_T0009936.1 MGP_CBAJ_G0008074.1 mouse_genomes_project 15 84773084 84773158 + Mir6955 miRNA miRNA MGP_CBAJ_T0101667.1 MGP_CBAJ_G0039698.1 mouse_genomes_project 15 107453668 107453906 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0042315.1 MGP_CBAJ_G0022094.1 mouse_genomes_project 15 111676497 111682697 - MGP_CBAJ_P0042315 Krt4 protein_coding protein_coding MGP_CBAJ_T0041261.1 MGP_CBAJ_G0021768.1 mouse_genomes_project 15 85057547 85063126 - 1700088E04Rik protein_coding processed_transcript MGP_CBAJ_T0041262.1 MGP_CBAJ_G0021768.1 mouse_genomes_project 15 85062864 85069529 - MGP_CBAJ_P0041262 1700088E04Rik protein_coding protein_coding MGP_CBAJ_T0041263.1 MGP_CBAJ_G0021768.1 mouse_genomes_project 15 85062864 85069477 - MGP_CBAJ_P0041263 1700088E04Rik protein_coding protein_coding MGP_CBAJ_T0041264.1 MGP_CBAJ_G0021768.1 mouse_genomes_project 15 85062870 85069543 - MGP_CBAJ_P0041264 1700088E04Rik protein_coding protein_coding MGP_CBAJ_T0041265.1 MGP_CBAJ_G0021768.1 mouse_genomes_project 15 85063201 85069520 - MGP_CBAJ_P0041265 1700088E04Rik protein_coding protein_coding MGP_CBAJ_T0041266.1 MGP_CBAJ_G0021768.1 mouse_genomes_project 15 85063218 85064927 - 1700088E04Rik protein_coding processed_transcript MGP_CBAJ_T0041267.1 MGP_CBAJ_G0021768.1 mouse_genomes_project 15 85063226 85069524 - MGP_CBAJ_P0041267 1700088E04Rik protein_coding protein_coding MGP_CBAJ_T0041268.1 MGP_CBAJ_G0021768.1 mouse_genomes_project 15 85063265 85069495 - MGP_CBAJ_P0041268 1700088E04Rik protein_coding protein_coding MGP_CBAJ_T0041269.1 MGP_CBAJ_G0021768.1 mouse_genomes_project 15 85063291 85069472 - MGP_CBAJ_P0041269 1700088E04Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0041270.1 MGP_CBAJ_G0021768.1 mouse_genomes_project 15 85065349 85069493 - MGP_CBAJ_P0041270 1700088E04Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0041271.1 MGP_CBAJ_G0021768.1 mouse_genomes_project 15 85065637 85067573 - MGP_CBAJ_P0041271 1700088E04Rik protein_coding protein_coding MGP_CBAJ_T0041272.1 MGP_CBAJ_G0021768.1 mouse_genomes_project 15 85065640 85069543 - MGP_CBAJ_P0041272 1700088E04Rik protein_coding protein_coding MGP_CBAJ_T0041273.1 MGP_CBAJ_G0021768.1 mouse_genomes_project 15 85065642 85069268 - MGP_CBAJ_P0041273 1700088E04Rik protein_coding protein_coding MGP_CBAJ_T0003536.1 MGP_CBAJ_G0003208.1 mouse_genomes_project 15 81049713 81051836 + Gm15945 antisense antisense MGP_CBAJ_T0040852.1 MGP_CBAJ_G0021656.1 mouse_genomes_project 15 80543295 80547040 + MGP_CBAJ_P0040852 protein_coding protein_coding MGP_CBAJ_T0040858.1 MGP_CBAJ_G0021656.1 mouse_genomes_project 15 80543328 80546755 + MGP_CBAJ_P0040858 protein_coding protein_coding MGP_CBAJ_T0040859.1 MGP_CBAJ_G0021656.1 mouse_genomes_project 15 80543381 80547043 + protein_coding retained_intron MGP_CBAJ_T0040860.1 MGP_CBAJ_G0021656.1 mouse_genomes_project 15 80543469 80546869 + MGP_CBAJ_P0040860 protein_coding protein_coding MGP_CBAJ_T0041686.1 MGP_CBAJ_G0021892.1 mouse_genomes_project 15 92215526 92313971 + MGP_CBAJ_P0041686 Fbln1 protein_coding protein_coding MGP_CBAJ_T0041687.1 MGP_CBAJ_G0021892.1 mouse_genomes_project 15 92215582 92274632 + MGP_CBAJ_P0041687 Fbln1 protein_coding protein_coding MGP_CBAJ_T0041688.1 MGP_CBAJ_G0021892.1 mouse_genomes_project 15 92286468 92288487 + Fbln1 protein_coding processed_transcript MGP_CBAJ_T0042446.1 MGP_CBAJ_G0022134.1 mouse_genomes_project 15 112985557 113007935 + MGP_CBAJ_P0042446 Hoxc4 protein_coding protein_coding MGP_CBAJ_T0042447.1 MGP_CBAJ_G0022134.1 mouse_genomes_project 15 113005924 113008382 + MGP_CBAJ_P0042447 Hoxc4 protein_coding protein_coding MGP_CBAJ_T0040324.1 MGP_CBAJ_G0021466.1 mouse_genomes_project 15 26390257 26739687 - MGP_CBAJ_P0040324 Fbxl7 protein_coding protein_coding MGP_CBAJ_T0098931.1 MGP_CBAJ_G0037186.1 mouse_genomes_project 15 112540818 112540925 - Gm25141 snRNA snRNA MGP_CBAJ_T0009978.1 MGP_CBAJ_G0008116.1 mouse_genomes_project 15 111449745 111449874 + Gm44323 miRNA miRNA MGP_CBAJ_T0100158.1 MGP_CBAJ_G0038413.1 mouse_genomes_project 15 34701921 34702045 - Gm24500 snoRNA snoRNA MGP_CBAJ_T0003538.1 MGP_CBAJ_G0003210.1 mouse_genomes_project 15 85093686 85146973 + Gm10863 antisense antisense MGP_CBAJ_T0003539.1 MGP_CBAJ_G0003210.1 mouse_genomes_project 15 85093703 85146758 + Gm10863 antisense antisense MGP_CBAJ_T0003540.1 MGP_CBAJ_G0003210.1 mouse_genomes_project 15 85093711 85158530 + Gm10863 antisense antisense MGP_CBAJ_T0003541.1 MGP_CBAJ_G0003210.1 mouse_genomes_project 15 85093711 85147087 + Gm10863 antisense antisense MGP_CBAJ_T0003542.1 MGP_CBAJ_G0003210.1 mouse_genomes_project 15 85139920 85148428 + Gm10863 antisense antisense MGP_CBAJ_T0040849.1 MGP_CBAJ_G0021654.1 mouse_genomes_project 15 80543226 80546769 + MGP_CBAJ_P0040849 Ly6f protein_coding protein_coding MGP_CBAJ_T0040850.1 MGP_CBAJ_G0021654.1 mouse_genomes_project 15 80543226 80547045 + MGP_CBAJ_P0040850 Ly6f protein_coding protein_coding MGP_CBAJ_T0042480.1 MGP_CBAJ_G0022147.1 mouse_genomes_project 15 113548997 113558129 - MGP_CBAJ_P0042480 Ppp1r1a protein_coding protein_coding MGP_CBAJ_T0040816.1 MGP_CBAJ_G0021642.1 mouse_genomes_project 15 79897576 79899141 - MGP_CBAJ_P0040816 Ly6d protein_coding protein_coding MGP_CBAJ_T0040786.1 MGP_CBAJ_G0021632.1 mouse_genomes_project 15 79613479 79698908 + MGP_CBAJ_P0040786 Adgrb1 protein_coding protein_coding MGP_CBAJ_T0040787.1 MGP_CBAJ_G0021632.1 mouse_genomes_project 15 79613721 79698908 + MGP_CBAJ_P0040787 Adgrb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040788.1 MGP_CBAJ_G0021632.1 mouse_genomes_project 15 79614114 79698908 + MGP_CBAJ_P0040788 Adgrb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0040789.1 MGP_CBAJ_G0021632.1 mouse_genomes_project 15 79641172 79644303 + MGP_CBAJ_P0040789 Adgrb1 protein_coding protein_coding MGP_CBAJ_T0040790.1 MGP_CBAJ_G0021632.1 mouse_genomes_project 15 79661806 79680823 + MGP_CBAJ_P0040790 Adgrb1 protein_coding protein_coding MGP_CBAJ_T0040791.1 MGP_CBAJ_G0021632.1 mouse_genomes_project 15 79663900 79678911 + MGP_CBAJ_P0040791 Adgrb1 protein_coding protein_coding MGP_CBAJ_T0040792.1 MGP_CBAJ_G0021632.1 mouse_genomes_project 15 79667148 79698908 + MGP_CBAJ_P0040792 Adgrb1 protein_coding protein_coding MGP_CBAJ_T0040793.1 MGP_CBAJ_G0021632.1 mouse_genomes_project 15 79667169 79698887 + MGP_CBAJ_P0040793 Adgrb1 protein_coding protein_coding MGP_CBAJ_T0040794.1 MGP_CBAJ_G0021632.1 mouse_genomes_project 15 79667217 79679565 + MGP_CBAJ_P0040794 Adgrb1 protein_coding protein_coding MGP_CBAJ_T0040795.1 MGP_CBAJ_G0021632.1 mouse_genomes_project 15 79677658 79698909 + Adgrb1 protein_coding processed_transcript MGP_CBAJ_T0040796.1 MGP_CBAJ_G0021632.1 mouse_genomes_project 15 79680846 79698909 + MGP_CBAJ_P0040796 Adgrb1 protein_coding protein_coding MGP_CBAJ_T0040651.1 MGP_CBAJ_G0021598.1 mouse_genomes_project 15 64705990 64709672 - MGP_CBAJ_P0040651 A1bg protein_coding protein_coding MGP_CBAJ_T0041306.1 MGP_CBAJ_G0021775.1 mouse_genomes_project 15 85319560 85331066 + MGP_CBAJ_P0041306 Maff protein_coding protein_coding MGP_CBAJ_T0041307.1 MGP_CBAJ_G0021775.1 mouse_genomes_project 15 85320080 85331066 + MGP_CBAJ_P0041307 Maff protein_coding protein_coding MGP_CBAJ_T0097775.1 MGP_CBAJ_G0036048.1 mouse_genomes_project 15 46732945 46734621 + pseudogene pseudogene MGP_CBAJ_T0041956.1 MGP_CBAJ_G0021970.1 mouse_genomes_project 15 104866854 104943033 + MGP_CBAJ_P0041956 Arid2 protein_coding protein_coding MGP_CBAJ_T0041957.1 MGP_CBAJ_G0021970.1 mouse_genomes_project 15 104866897 104997621 + MGP_CBAJ_P0041957 Arid2 protein_coding protein_coding MGP_CBAJ_T0041958.1 MGP_CBAJ_G0021970.1 mouse_genomes_project 15 104947834 104950809 + Arid2 protein_coding retained_intron MGP_CBAJ_T0041959.1 MGP_CBAJ_G0021970.1 mouse_genomes_project 15 104963806 104996230 + Arid2 protein_coding retained_intron MGP_CBAJ_T0041564.1 MGP_CBAJ_G0021849.1 mouse_genomes_project 15 88859081 88874262 - MGP_CBAJ_P0041564 protein_coding protein_coding MGP_CBAJ_T0017223.1 MGP_CBAJ_G0015049.1 mouse_genomes_project 15 97217100 97220682 - Gm15609 processed_transcript processed_transcript MGP_CBAJ_T0041743.1 MGP_CBAJ_G0021911.1 mouse_genomes_project 15 96404109 96411167 + MGP_CBAJ_P0041743 Creld2 protein_coding protein_coding MGP_CBAJ_T0042050.1 MGP_CBAJ_G0021999.1 mouse_genomes_project 15 107400663 107401721 + MGP_CBAJ_P0042050 Olfr281 protein_coding protein_coding MGP_CBAJ_T0041345.1 MGP_CBAJ_G0021788.1 mouse_genomes_project 15 85798546 85811162 - MGP_CBAJ_P0041345 Dnal4 protein_coding protein_coding MGP_CBAJ_T0041346.1 MGP_CBAJ_G0021788.1 mouse_genomes_project 15 85798549 85811246 - MGP_CBAJ_P0041346 Dnal4 protein_coding protein_coding MGP_CBAJ_T0041347.1 MGP_CBAJ_G0021788.1 mouse_genomes_project 15 85802080 85813759 - Dnal4 protein_coding processed_transcript MGP_CBAJ_T0041348.1 MGP_CBAJ_G0021788.1 mouse_genomes_project 15 85811350 85814636 - Dnal4 protein_coding processed_transcript MGP_CBAJ_T0041794.1 MGP_CBAJ_G0021924.1 mouse_genomes_project 15 96805926 96820182 - MGP_CBAJ_P0041794 Dennd6b protein_coding protein_coding MGP_CBAJ_T0098878.1 MGP_CBAJ_G0037133.1 mouse_genomes_project 15 524541 524667 - Gm22031 snRNA snRNA MGP_CBAJ_T0041393.1 MGP_CBAJ_G0021800.1 mouse_genomes_project 15 86404855 86407212 + MGP_CBAJ_P0041393 Atf4 protein_coding protein_coding MGP_CBAJ_T0040357.1 MGP_CBAJ_G0021482.1 mouse_genomes_project 15 32629070 33114962 + MGP_CBAJ_P0040357 Sema5a protein_coding protein_coding MGP_CBAJ_T0042154.1 MGP_CBAJ_G0022038.1 mouse_genomes_project 15 108835984 108891512 - MGP_CBAJ_P0042154 Racgap1 protein_coding unknown_likely_coding MGP_CBAJ_T0042155.1 MGP_CBAJ_G0022038.1 mouse_genomes_project 15 108835984 108891508 - MGP_CBAJ_P0042155 Racgap1 protein_coding unknown_likely_coding MGP_CBAJ_T0042156.1 MGP_CBAJ_G0022038.1 mouse_genomes_project 15 108835987 108891623 - MGP_CBAJ_P0042156 Racgap1 protein_coding protein_coding MGP_CBAJ_T0042157.1 MGP_CBAJ_G0022038.1 mouse_genomes_project 15 108835988 108891636 - MGP_CBAJ_P0042157 Racgap1 protein_coding protein_coding MGP_CBAJ_T0042158.1 MGP_CBAJ_G0022038.1 mouse_genomes_project 15 108842797 108855453 - Racgap1 protein_coding retained_intron MGP_CBAJ_T0042159.1 MGP_CBAJ_G0022038.1 mouse_genomes_project 15 108843077 108891569 - Racgap1 protein_coding processed_transcript MGP_CBAJ_T0042160.1 MGP_CBAJ_G0022038.1 mouse_genomes_project 15 108851194 108891562 - Racgap1 protein_coding retained_intron MGP_CBAJ_T0042161.1 MGP_CBAJ_G0022038.1 mouse_genomes_project 15 108851254 108870496 - MGP_CBAJ_P0042161 Racgap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042162.1 MGP_CBAJ_G0022038.1 mouse_genomes_project 15 108851300 108868945 - Racgap1 protein_coding retained_intron MGP_CBAJ_T0042163.1 MGP_CBAJ_G0022038.1 mouse_genomes_project 15 108854783 108891632 - MGP_CBAJ_P0042163 Racgap1 protein_coding protein_coding MGP_CBAJ_T0042164.1 MGP_CBAJ_G0022038.1 mouse_genomes_project 15 108854799 108857427 - Racgap1 protein_coding retained_intron MGP_CBAJ_T0042165.1 MGP_CBAJ_G0022038.1 mouse_genomes_project 15 108856945 108891549 - MGP_CBAJ_P0042165 Racgap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042166.1 MGP_CBAJ_G0022038.1 mouse_genomes_project 15 108866830 108891592 - MGP_CBAJ_P0042166 Racgap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042167.1 MGP_CBAJ_G0022038.1 mouse_genomes_project 15 108868134 108891562 - Racgap1 protein_coding retained_intron MGP_CBAJ_T0042168.1 MGP_CBAJ_G0022038.1 mouse_genomes_project 15 108868349 108891592 - MGP_CBAJ_P0042168 Racgap1 protein_coding protein_coding MGP_CBAJ_T0042169.1 MGP_CBAJ_G0022038.1 mouse_genomes_project 15 108870477 108891623 - MGP_CBAJ_P0042169 Racgap1 protein_coding protein_coding MGP_CBAJ_T0003537.1 MGP_CBAJ_G0003209.1 mouse_genomes_project 15 84796430 84798134 - 1700027A07Rik antisense antisense MGP_CBAJ_T0040912.1 MGP_CBAJ_G0021673.1 mouse_genomes_project 15 81339616 81348042 + MGP_CBAJ_P0040912 Zfp623 protein_coding protein_coding MGP_CBAJ_T0040827.1 MGP_CBAJ_G0021649.1 mouse_genomes_project 15 80046847 80072956 - 2010109I03Rik protein_coding processed_transcript MGP_CBAJ_T0040828.1 MGP_CBAJ_G0021649.1 mouse_genomes_project 15 80049396 80054267 - MGP_CBAJ_P0040828 2010109I03Rik protein_coding protein_coding MGP_CBAJ_T0040195.1 MGP_CBAJ_G0021429.1 mouse_genomes_project 15 7062416 7261722 - MGP_CBAJ_P0040195 protein_coding unknown_likely_coding MGP_CBAJ_T0040196.1 MGP_CBAJ_G0021429.1 mouse_genomes_project 15 7062420 7261791 - MGP_CBAJ_P0040196 protein_coding protein_coding MGP_CBAJ_T0040197.1 MGP_CBAJ_G0021429.1 mouse_genomes_project 15 7154207 7261821 - MGP_CBAJ_P0040197 protein_coding protein_coding MGP_CBAJ_T0040198.1 MGP_CBAJ_G0021429.1 mouse_genomes_project 15 7183948 7261773 - MGP_CBAJ_P0040198 protein_coding protein_coding MGP_CBAJ_T0040199.1 MGP_CBAJ_G0021429.1 mouse_genomes_project 15 7213839 7261773 - MGP_CBAJ_P0040199 protein_coding protein_coding MGP_CBAJ_T0040200.1 MGP_CBAJ_G0021429.1 mouse_genomes_project 15 7213842 7261730 - MGP_CBAJ_P0040200 protein_coding protein_coding MGP_CBAJ_T0041294.1 MGP_CBAJ_G0021774.1 mouse_genomes_project 15 85240116 85295677 - MGP_CBAJ_P0041294 Pla2g6 protein_coding protein_coding MGP_CBAJ_T0041295.1 MGP_CBAJ_G0021774.1 mouse_genomes_project 15 85240116 85295625 - MGP_CBAJ_P0041295 Pla2g6 protein_coding protein_coding MGP_CBAJ_T0041296.1 MGP_CBAJ_G0021774.1 mouse_genomes_project 15 85240116 85295652 - MGP_CBAJ_P0041296 Pla2g6 protein_coding protein_coding MGP_CBAJ_T0041297.1 MGP_CBAJ_G0021774.1 mouse_genomes_project 15 85240116 85295413 - MGP_CBAJ_P0041297 Pla2g6 protein_coding protein_coding MGP_CBAJ_T0041298.1 MGP_CBAJ_G0021774.1 mouse_genomes_project 15 85240120 85295702 - MGP_CBAJ_P0041298 Pla2g6 protein_coding protein_coding MGP_CBAJ_T0041299.1 MGP_CBAJ_G0021774.1 mouse_genomes_project 15 85243113 85258654 - Pla2g6 protein_coding retained_intron MGP_CBAJ_T0041300.1 MGP_CBAJ_G0021774.1 mouse_genomes_project 15 85257170 85262546 - Pla2g6 protein_coding retained_intron MGP_CBAJ_T0041301.1 MGP_CBAJ_G0021774.1 mouse_genomes_project 15 85262501 85265628 - Pla2g6 protein_coding retained_intron MGP_CBAJ_T0041302.1 MGP_CBAJ_G0021774.1 mouse_genomes_project 15 85265684 85295839 - MGP_CBAJ_P0041302 Pla2g6 protein_coding protein_coding MGP_CBAJ_T0041303.1 MGP_CBAJ_G0021774.1 mouse_genomes_project 15 85268861 85285078 - Pla2g6 protein_coding retained_intron MGP_CBAJ_T0041304.1 MGP_CBAJ_G0021774.1 mouse_genomes_project 15 85268929 85290801 - MGP_CBAJ_P0041304 Pla2g6 protein_coding protein_coding MGP_CBAJ_T0041305.1 MGP_CBAJ_G0021774.1 mouse_genomes_project 15 85284936 85291939 - MGP_CBAJ_P0041305 Pla2g6 protein_coding protein_coding MGP_CBAJ_T0042466.1 MGP_CBAJ_G0022141.1 mouse_genomes_project 15 113322420 113353612 - MGP_CBAJ_P0042466 Zfp385a protein_coding protein_coding MGP_CBAJ_T0041025.1 MGP_CBAJ_G0021697.1 mouse_genomes_project 15 81819324 81884604 + Mroh1 protein_coding processed_transcript MGP_CBAJ_T0041026.1 MGP_CBAJ_G0021697.1 mouse_genomes_project 15 81819576 81850190 + Mroh1 protein_coding processed_transcript MGP_CBAJ_T0041027.1 MGP_CBAJ_G0021697.1 mouse_genomes_project 15 81819576 81897872 + MGP_CBAJ_P0041027 Mroh1 protein_coding protein_coding MGP_CBAJ_T0041028.1 MGP_CBAJ_G0021697.1 mouse_genomes_project 15 81819586 81897869 + Mroh1 protein_coding retained_intron MGP_CBAJ_T0041029.1 MGP_CBAJ_G0021697.1 mouse_genomes_project 15 81819595 81842773 + MGP_CBAJ_P0041029 Mroh1 protein_coding protein_coding MGP_CBAJ_T0041030.1 MGP_CBAJ_G0021697.1 mouse_genomes_project 15 81819616 81850189 + MGP_CBAJ_P0041030 Mroh1 protein_coding protein_coding MGP_CBAJ_T0041031.1 MGP_CBAJ_G0021697.1 mouse_genomes_project 15 81830621 81884604 + MGP_CBAJ_P0041031 Mroh1 protein_coding protein_coding MGP_CBAJ_T0041032.1 MGP_CBAJ_G0021697.1 mouse_genomes_project 15 81832906 81897812 + MGP_CBAJ_P0041032 Mroh1 protein_coding protein_coding MGP_CBAJ_T0041033.1 MGP_CBAJ_G0021697.1 mouse_genomes_project 15 81870628 81897872 + Mroh1 protein_coding retained_intron MGP_CBAJ_T0041034.1 MGP_CBAJ_G0021697.1 mouse_genomes_project 15 81871385 81878769 + MGP_CBAJ_P0041034 Mroh1 protein_coding protein_coding MGP_CBAJ_T0041035.1 MGP_CBAJ_G0021697.1 mouse_genomes_project 15 81885902 81891675 + Mroh1 protein_coding retained_intron MGP_CBAJ_T0041036.1 MGP_CBAJ_G0021697.1 mouse_genomes_project 15 81894497 81896054 + Mroh1 protein_coding retained_intron MGP_CBAJ_T0041037.1 MGP_CBAJ_G0021697.1 mouse_genomes_project 15 81895461 81896219 + Mroh1 protein_coding retained_intron MGP_CBAJ_T0041038.1 MGP_CBAJ_G0021697.1 mouse_genomes_project 15 81896647 81897218 + Mroh1 protein_coding retained_intron MGP_CBAJ_T0041039.1 MGP_CBAJ_G0021697.1 mouse_genomes_project 15 81896695 81897872 + MGP_CBAJ_P0041039 Mroh1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041040.1 MGP_CBAJ_G0021697.1 mouse_genomes_project 15 81896972 81897872 + MGP_CBAJ_P0041040 Mroh1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041041.1 MGP_CBAJ_G0021697.1 mouse_genomes_project 15 81896987 81897871 + Mroh1 protein_coding retained_intron MGP_CBAJ_T0040637.1 MGP_CBAJ_G0021591.1 mouse_genomes_project 15 62496528 62527739 - MGP_CBAJ_P0040637 Mtss1 protein_coding unknown_likely_coding MGP_CBAJ_T0040638.1 MGP_CBAJ_G0021591.1 mouse_genomes_project 15 62496542 62651283 - MGP_CBAJ_P0040638 Mtss1 protein_coding protein_coding MGP_CBAJ_T0041819.1 MGP_CBAJ_G0021930.1 mouse_genomes_project 15 97020725 97038218 + MGP_CBAJ_P0041819 Ncaph2 protein_coding protein_coding MGP_CBAJ_T0041820.1 MGP_CBAJ_G0021930.1 mouse_genomes_project 15 97020742 97038218 + MGP_CBAJ_P0041820 Ncaph2 protein_coding protein_coding MGP_CBAJ_T0041821.1 MGP_CBAJ_G0021930.1 mouse_genomes_project 15 97020742 97038218 + MGP_CBAJ_P0041821 Ncaph2 protein_coding protein_coding MGP_CBAJ_T0041822.1 MGP_CBAJ_G0021930.1 mouse_genomes_project 15 97020769 97038218 + MGP_CBAJ_P0041822 Ncaph2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0041823.1 MGP_CBAJ_G0021930.1 mouse_genomes_project 15 97020811 97028877 + Ncaph2 protein_coding retained_intron MGP_CBAJ_T0041824.1 MGP_CBAJ_G0021930.1 mouse_genomes_project 15 97020827 97028901 + Ncaph2 protein_coding retained_intron MGP_CBAJ_T0041825.1 MGP_CBAJ_G0021930.1 mouse_genomes_project 15 97020920 97030328 + Ncaph2 protein_coding retained_intron MGP_CBAJ_T0041826.1 MGP_CBAJ_G0021930.1 mouse_genomes_project 15 97034688 97035672 + Ncaph2 protein_coding retained_intron MGP_CBAJ_T0041827.1 MGP_CBAJ_G0021930.1 mouse_genomes_project 15 97034874 97036237 + Ncaph2 protein_coding retained_intron MGP_CBAJ_T0041828.1 MGP_CBAJ_G0021930.1 mouse_genomes_project 15 97035029 97036186 + Ncaph2 protein_coding retained_intron MGP_CBAJ_T0041829.1 MGP_CBAJ_G0021930.1 mouse_genomes_project 15 97035294 97035929 + Ncaph2 protein_coding retained_intron MGP_CBAJ_T0041830.1 MGP_CBAJ_G0021930.1 mouse_genomes_project 15 97035643 97036454 + Ncaph2 protein_coding retained_intron MGP_CBAJ_T0040745.1 MGP_CBAJ_G0021620.1 mouse_genomes_project 15 76643154 76904909 - MGP_CBAJ_P0040745 Col22a1 protein_coding protein_coding MGP_CBAJ_T0040746.1 MGP_CBAJ_G0021620.1 mouse_genomes_project 15 76721730 76754016 - MGP_CBAJ_P0040746 Col22a1 protein_coding protein_coding MGP_CBAJ_T0040747.1 MGP_CBAJ_G0021620.1 mouse_genomes_project 15 76761101 76814056 - Col22a1 protein_coding processed_transcript MGP_CBAJ_T0040748.1 MGP_CBAJ_G0021620.1 mouse_genomes_project 15 76779289 76814081 - MGP_CBAJ_P0040748 Col22a1 protein_coding protein_coding MGP_CBAJ_T0003543.1 MGP_CBAJ_G0003211.1 mouse_genomes_project 15 85414770 85419156 + Gm16059 antisense antisense MGP_CBAJ_T0100170.1 MGP_CBAJ_G0038425.1 mouse_genomes_project 15 56663705 56663837 - Gm23200 snoRNA snoRNA MGP_CBAJ_T0040218.1 MGP_CBAJ_G0021433.1 mouse_genomes_project 15 8043931 8072452 - MGP_CBAJ_P0040218 Dnajc21 protein_coding protein_coding MGP_CBAJ_T0040219.1 MGP_CBAJ_G0021433.1 mouse_genomes_project 15 8043940 8063754 - MGP_CBAJ_P0040219 Dnajc21 protein_coding protein_coding MGP_CBAJ_T0040220.1 MGP_CBAJ_G0021433.1 mouse_genomes_project 15 8043941 8047168 - Dnajc21 protein_coding retained_intron MGP_CBAJ_T0040221.1 MGP_CBAJ_G0021433.1 mouse_genomes_project 15 8044871 8049086 - Dnajc21 protein_coding retained_intron MGP_CBAJ_T0040222.1 MGP_CBAJ_G0021433.1 mouse_genomes_project 15 8052168 8064275 - Dnajc21 protein_coding retained_intron MGP_CBAJ_T0003517.1 MGP_CBAJ_G0003192.1 mouse_genomes_project 15 2218004 2230685 - Gm15938 antisense antisense MGP_CBAJ_T0041193.1 MGP_CBAJ_G0021744.1 mouse_genomes_project 15 84216955 84223245 - MGP_CBAJ_P0041193 Tst protein_coding protein_coding MGP_CBAJ_T0041838.1 MGP_CBAJ_G0021936.1 mouse_genomes_project 15 97089627 97106018 - Chkb protein_coding retained_intron MGP_CBAJ_T0041843.1 MGP_CBAJ_G0021936.1 mouse_genomes_project 15 97102681 97106182 - Chkb protein_coding retained_intron MGP_CBAJ_T0041844.1 MGP_CBAJ_G0021936.1 mouse_genomes_project 15 97102681 97103483 - Chkb protein_coding processed_transcript MGP_CBAJ_T0041845.1 MGP_CBAJ_G0021936.1 mouse_genomes_project 15 97102688 97105761 - Chkb protein_coding retained_intron MGP_CBAJ_T0041846.1 MGP_CBAJ_G0021936.1 mouse_genomes_project 15 97102688 97106221 - MGP_CBAJ_P0041846 Chkb protein_coding protein_coding MGP_CBAJ_T0041847.1 MGP_CBAJ_G0021936.1 mouse_genomes_project 15 97102762 97104815 - MGP_CBAJ_P0041847 Chkb protein_coding nonsense_mediated_decay MGP_CBAJ_T0041848.1 MGP_CBAJ_G0021936.1 mouse_genomes_project 15 97102789 97103481 - Chkb protein_coding retained_intron MGP_CBAJ_T0041849.1 MGP_CBAJ_G0021936.1 mouse_genomes_project 15 97103436 97106230 - Chkb protein_coding retained_intron MGP_CBAJ_T0041850.1 MGP_CBAJ_G0021936.1 mouse_genomes_project 15 97103701 97105752 - Chkb protein_coding retained_intron MGP_CBAJ_T0041851.1 MGP_CBAJ_G0021936.1 mouse_genomes_project 15 97103956 97105415 - MGP_CBAJ_P0041851 Chkb protein_coding protein_coding MGP_CBAJ_T0041194.1 MGP_CBAJ_G0021745.1 mouse_genomes_project 15 84224097 84231388 + MGP_CBAJ_P0041194 Mpst protein_coding protein_coding MGP_CBAJ_T0041195.1 MGP_CBAJ_G0021745.1 mouse_genomes_project 15 84224186 84231388 + MGP_CBAJ_P0041195 Mpst protein_coding protein_coding MGP_CBAJ_T0041196.1 MGP_CBAJ_G0021745.1 mouse_genomes_project 15 84224490 84231388 + MGP_CBAJ_P0041196 Mpst protein_coding protein_coding MGP_CBAJ_T0042027.1 MGP_CBAJ_G0021988.1 mouse_genomes_project 15 106977272 107007981 - MGP_CBAJ_P0042027 Asb8 protein_coding protein_coding MGP_CBAJ_T0042028.1 MGP_CBAJ_G0021988.1 mouse_genomes_project 15 106978349 106988143 - MGP_CBAJ_P0042028 Asb8 protein_coding protein_coding MGP_CBAJ_T0042029.1 MGP_CBAJ_G0021988.1 mouse_genomes_project 15 106978349 106988096 - MGP_CBAJ_P0042029 Asb8 protein_coding protein_coding MGP_CBAJ_T0042030.1 MGP_CBAJ_G0021988.1 mouse_genomes_project 15 106978349 107007916 - MGP_CBAJ_P0042030 Asb8 protein_coding protein_coding MGP_CBAJ_T0041541.1 MGP_CBAJ_G0021836.1 mouse_genomes_project 15 88540536 88554793 + MGP_CBAJ_P0041541 Ccdc134 protein_coding protein_coding MGP_CBAJ_T0100162.1 MGP_CBAJ_G0038417.1 mouse_genomes_project 15 39169032 39169166 + Gm22353 snoRNA snoRNA MGP_CBAJ_T0041551.1 MGP_CBAJ_G0021843.1 mouse_genomes_project 15 88749594 88768110 + MGP_CBAJ_P0041551 Wbp2nl protein_coding protein_coding MGP_CBAJ_T0040081.1 MGP_CBAJ_G0021396.1 mouse_genomes_project 15 916553 930270 - MGP_CBAJ_P0040081 AW549877 protein_coding protein_coding MGP_CBAJ_T0041574.1 MGP_CBAJ_G0021858.1 mouse_genomes_project 15 89626662 89651284 - MGP_CBAJ_P0041574 Nfam1 protein_coding protein_coding MGP_CBAJ_T0041575.1 MGP_CBAJ_G0021858.1 mouse_genomes_project 15 89628677 89667292 - MGP_CBAJ_P0041575 Nfam1 protein_coding protein_coding MGP_CBAJ_T0040356.1 MGP_CBAJ_G0021481.1 mouse_genomes_project 15 32566147 32567153 + MGP_CBAJ_P0040356 Tas2r119 protein_coding protein_coding MGP_CBAJ_T0040294.1 MGP_CBAJ_G0021457.1 mouse_genomes_project 15 20290594 20841369 + MGP_CBAJ_P0040294 Cdh12 protein_coding protein_coding MGP_CBAJ_T0042209.1 MGP_CBAJ_G0022054.1 mouse_genomes_project 15 109766160 109806255 + MGP_CBAJ_P0042209 protein_coding protein_coding MGP_CBAJ_T0098903.1 MGP_CBAJ_G0037158.1 mouse_genomes_project 15 67468400 67468463 - Gm25702 snRNA snRNA MGP_CBAJ_T0100202.1 MGP_CBAJ_G0038457.1 mouse_genomes_project 16 22026594 22026733 + Gm24616 snoRNA snoRNA MGP_CBAJ_T0098976.1 MGP_CBAJ_G0037231.1 mouse_genomes_project 16 91326658 91326765 + Gm24508 snRNA snRNA MGP_CBAJ_T0042574.1 MGP_CBAJ_G0022169.1 mouse_genomes_project 16 1258908 1259433 - Gm9803 protein_coding retained_intron MGP_CBAJ_T0042575.1 MGP_CBAJ_G0022169.1 mouse_genomes_project 16 1258908 1267381 - MGP_CBAJ_P0042575 Gm9803 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042576.1 MGP_CBAJ_G0022169.1 mouse_genomes_project 16 1258908 1267433 - MGP_CBAJ_P0042576 Gm9803 protein_coding protein_coding MGP_CBAJ_T0042577.1 MGP_CBAJ_G0022169.1 mouse_genomes_project 16 1259046 1260599 - Gm9803 protein_coding retained_intron MGP_CBAJ_T0043696.1 MGP_CBAJ_G0022439.1 mouse_genomes_project 16 32369265 32379798 + MGP_CBAJ_P0043696 Tm4sf19 protein_coding protein_coding MGP_CBAJ_T0044354.1 MGP_CBAJ_G0022603.1 mouse_genomes_project 16 60721977 60860755 - MGP_CBAJ_P0044354 Col8a1 protein_coding protein_coding MGP_CBAJ_T0044285.1 MGP_CBAJ_G0022585.1 mouse_genomes_project 16 58810696 58847464 - MGP_CBAJ_P0044285 Cep97 protein_coding protein_coding MGP_CBAJ_T0044286.1 MGP_CBAJ_G0022585.1 mouse_genomes_project 16 58815791 58847089 - MGP_CBAJ_P0044286 Cep97 protein_coding protein_coding MGP_CBAJ_T0044287.1 MGP_CBAJ_G0022585.1 mouse_genomes_project 16 58815818 58846841 - MGP_CBAJ_P0044287 Cep97 protein_coding protein_coding MGP_CBAJ_T0044288.1 MGP_CBAJ_G0022585.1 mouse_genomes_project 16 58836945 58847406 - MGP_CBAJ_P0044288 Cep97 protein_coding protein_coding MGP_CBAJ_T0044289.1 MGP_CBAJ_G0022585.1 mouse_genomes_project 16 58836952 58847463 - MGP_CBAJ_P0044289 Cep97 protein_coding protein_coding MGP_CBAJ_T0044290.1 MGP_CBAJ_G0022585.1 mouse_genomes_project 16 58837142 58847442 - MGP_CBAJ_P0044290 Cep97 protein_coding protein_coding MGP_CBAJ_T0044113.1 MGP_CBAJ_G0022539.1 mouse_genomes_project 16 45950704 45993592 + MGP_CBAJ_P0044113 Spice1 protein_coding protein_coding MGP_CBAJ_T0044114.1 MGP_CBAJ_G0022539.1 mouse_genomes_project 16 45950997 45975844 + Spice1 protein_coding processed_transcript MGP_CBAJ_T0044115.1 MGP_CBAJ_G0022539.1 mouse_genomes_project 16 45951629 45972826 + Spice1 protein_coding processed_transcript MGP_CBAJ_T0044116.1 MGP_CBAJ_G0022539.1 mouse_genomes_project 16 45972728 45975482 + Spice1 protein_coding retained_intron MGP_CBAJ_T0044117.1 MGP_CBAJ_G0022539.1 mouse_genomes_project 16 45972798 45975849 + Spice1 protein_coding retained_intron MGP_CBAJ_T0044118.1 MGP_CBAJ_G0022539.1 mouse_genomes_project 16 45975099 45990778 + Spice1 protein_coding retained_intron MGP_CBAJ_T0044119.1 MGP_CBAJ_G0022539.1 mouse_genomes_project 16 45975541 45978713 + Spice1 protein_coding processed_transcript MGP_CBAJ_T0044120.1 MGP_CBAJ_G0022539.1 mouse_genomes_project 16 45990455 45992204 + Spice1 protein_coding retained_intron MGP_CBAJ_T0100194.1 MGP_CBAJ_G0038449.1 mouse_genomes_project 16 16404084 16404210 - Gm25777 snoRNA snoRNA MGP_CBAJ_T0043305.1 MGP_CBAJ_G0022344.1 mouse_genomes_project 16 18713510 18792562 - MGP_CBAJ_P0043305 Abcc5 protein_coding unknown_likely_coding MGP_CBAJ_T0043306.1 MGP_CBAJ_G0022344.1 mouse_genomes_project 16 18713513 18823009 - MGP_CBAJ_P0043306 Abcc5 protein_coding protein_coding MGP_CBAJ_T0043307.1 MGP_CBAJ_G0022344.1 mouse_genomes_project 16 18713516 18822950 - MGP_CBAJ_P0043307 Abcc5 protein_coding protein_coding MGP_CBAJ_T0043308.1 MGP_CBAJ_G0022344.1 mouse_genomes_project 16 18713518 18792321 - Abcc5 protein_coding retained_intron MGP_CBAJ_T0043309.1 MGP_CBAJ_G0022344.1 mouse_genomes_project 16 18724793 18753107 - Abcc5 protein_coding processed_transcript MGP_CBAJ_T0043310.1 MGP_CBAJ_G0022344.1 mouse_genomes_project 16 18732110 18753301 - Abcc5 protein_coding retained_intron MGP_CBAJ_T0043311.1 MGP_CBAJ_G0022344.1 mouse_genomes_project 16 18761051 18769342 - Abcc5 protein_coding retained_intron MGP_CBAJ_T0043312.1 MGP_CBAJ_G0022344.1 mouse_genomes_project 16 18771183 18789103 - Abcc5 protein_coding retained_intron MGP_CBAJ_T0043313.1 MGP_CBAJ_G0022344.1 mouse_genomes_project 16 18785374 18822601 - MGP_CBAJ_P0043313 Abcc5 protein_coding protein_coding MGP_CBAJ_T0043314.1 MGP_CBAJ_G0022344.1 mouse_genomes_project 16 18791516 18792986 - Abcc5 protein_coding retained_intron MGP_CBAJ_T0043315.1 MGP_CBAJ_G0022344.1 mouse_genomes_project 16 18793459 18822939 - Abcc5 protein_coding retained_intron MGP_CBAJ_T0043316.1 MGP_CBAJ_G0022344.1 mouse_genomes_project 16 18793460 18822969 - MGP_CBAJ_P0043316 Abcc5 protein_coding protein_coding MGP_CBAJ_T0043317.1 MGP_CBAJ_G0022344.1 mouse_genomes_project 16 18793461 18797430 - Abcc5 protein_coding processed_transcript MGP_CBAJ_T0042809.1 MGP_CBAJ_G0022230.1 mouse_genomes_project 16 9446537 9457808 + Shisa9 protein_coding processed_transcript MGP_CBAJ_T0042810.1 MGP_CBAJ_G0022230.1 mouse_genomes_project 16 9447005 9755784 + MGP_CBAJ_P0042810 Shisa9 protein_coding protein_coding MGP_CBAJ_T0042811.1 MGP_CBAJ_G0022230.1 mouse_genomes_project 16 9447005 9756737 + MGP_CBAJ_P0042811 Shisa9 protein_coding protein_coding MGP_CBAJ_T0042812.1 MGP_CBAJ_G0022230.1 mouse_genomes_project 16 9447102 9452506 + Shisa9 protein_coding processed_transcript MGP_CBAJ_T0044476.1 MGP_CBAJ_G0022653.1 mouse_genomes_project 16 79419671 80011288 - MGP_CBAJ_P0044476 Robo2 protein_coding protein_coding MGP_CBAJ_T0044477.1 MGP_CBAJ_G0022653.1 mouse_genomes_project 16 79421720 80011591 - MGP_CBAJ_P0044477 Robo2 protein_coding protein_coding MGP_CBAJ_T0044478.1 MGP_CBAJ_G0022653.1 mouse_genomes_project 16 79422029 79427253 - Robo2 protein_coding retained_intron MGP_CBAJ_T0044479.1 MGP_CBAJ_G0022653.1 mouse_genomes_project 16 79423191 80011211 - MGP_CBAJ_P0044479 Robo2 protein_coding unknown_likely_coding MGP_CBAJ_T0044480.1 MGP_CBAJ_G0022653.1 mouse_genomes_project 16 79424396 79437055 - Robo2 protein_coding processed_transcript MGP_CBAJ_T0044481.1 MGP_CBAJ_G0022653.1 mouse_genomes_project 16 79453177 80012084 - MGP_CBAJ_P0044481 Robo2 protein_coding protein_coding MGP_CBAJ_T0044482.1 MGP_CBAJ_G0022653.1 mouse_genomes_project 16 79453432 79478817 - Robo2 protein_coding retained_intron MGP_CBAJ_T0044483.1 MGP_CBAJ_G0022653.1 mouse_genomes_project 16 79534870 79575603 - Robo2 protein_coding processed_transcript MGP_CBAJ_T0044484.1 MGP_CBAJ_G0022653.1 mouse_genomes_project 16 79597691 80011736 - Robo2 protein_coding retained_intron MGP_CBAJ_T0044485.1 MGP_CBAJ_G0022653.1 mouse_genomes_project 16 79947668 80012124 - Robo2 protein_coding retained_intron MGP_CBAJ_T0100209.1 MGP_CBAJ_G0038464.1 mouse_genomes_project 16 36196760 36196907 - Gm25967 snoRNA snoRNA MGP_CBAJ_T0100225.1 MGP_CBAJ_G0038480.1 mouse_genomes_project 16 69432622 69432752 - Gm22429 snoRNA snoRNA MGP_CBAJ_T0044928.1 MGP_CBAJ_G0022779.1 mouse_genomes_project 16 104752390 104869212 - MGP_CBAJ_P0044928 Brwd1 protein_coding protein_coding MGP_CBAJ_T0044929.1 MGP_CBAJ_G0022779.1 mouse_genomes_project 16 104752747 104869231 - MGP_CBAJ_P0044929 Brwd1 protein_coding protein_coding MGP_CBAJ_T0044930.1 MGP_CBAJ_G0022779.1 mouse_genomes_project 16 104759570 104869231 - MGP_CBAJ_P0044930 Brwd1 protein_coding protein_coding MGP_CBAJ_T0044931.1 MGP_CBAJ_G0022779.1 mouse_genomes_project 16 104765522 104869231 - MGP_CBAJ_P0044931 Brwd1 protein_coding protein_coding MGP_CBAJ_T0044932.1 MGP_CBAJ_G0022779.1 mouse_genomes_project 16 104766947 104830015 - MGP_CBAJ_P0044932 Brwd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044933.1 MGP_CBAJ_G0022779.1 mouse_genomes_project 16 104768112 104772438 - Brwd1 protein_coding processed_transcript MGP_CBAJ_T0044934.1 MGP_CBAJ_G0022779.1 mouse_genomes_project 16 104768505 104772345 - Brwd1 protein_coding retained_intron MGP_CBAJ_T0044935.1 MGP_CBAJ_G0022779.1 mouse_genomes_project 16 104772709 104781498 - Brwd1 protein_coding retained_intron MGP_CBAJ_T0044936.1 MGP_CBAJ_G0022779.1 mouse_genomes_project 16 104781330 104810274 - MGP_CBAJ_P0044936 Brwd1 protein_coding protein_coding MGP_CBAJ_T0044937.1 MGP_CBAJ_G0022779.1 mouse_genomes_project 16 104798225 104799923 - Brwd1 protein_coding retained_intron MGP_CBAJ_T0044938.1 MGP_CBAJ_G0022779.1 mouse_genomes_project 16 104801535 104801988 - Brwd1 protein_coding retained_intron MGP_CBAJ_T0044939.1 MGP_CBAJ_G0022779.1 mouse_genomes_project 16 104815904 104818490 - Brwd1 protein_coding retained_intron MGP_CBAJ_T0044940.1 MGP_CBAJ_G0022779.1 mouse_genomes_project 16 104818721 104843988 - MGP_CBAJ_P0044940 Brwd1 protein_coding protein_coding MGP_CBAJ_T0044941.1 MGP_CBAJ_G0022779.1 mouse_genomes_project 16 104818845 104843953 - MGP_CBAJ_P0044941 Brwd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044942.1 MGP_CBAJ_G0022779.1 mouse_genomes_project 16 104829076 104830298 - Brwd1 protein_coding retained_intron MGP_CBAJ_T0044943.1 MGP_CBAJ_G0022779.1 mouse_genomes_project 16 104849556 104869310 - MGP_CBAJ_P0044943 Brwd1 protein_coding protein_coding MGP_CBAJ_T0042619.1 MGP_CBAJ_G0022177.1 mouse_genomes_project 16 1553757 1559289 - MGP_CBAJ_P0042619 Ubald1 protein_coding protein_coding MGP_CBAJ_T0042620.1 MGP_CBAJ_G0022177.1 mouse_genomes_project 16 1553767 1558785 - Ubald1 protein_coding retained_intron MGP_CBAJ_T0013025.1 MGP_CBAJ_G0011137.1 mouse_genomes_project 16 90244680 90245163 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0044666.1 MGP_CBAJ_G0022731.1 mouse_genomes_project 16 98935918 98945020 - MGP_CBAJ_P0044666 1110004E09Rik protein_coding protein_coding MGP_CBAJ_T0044667.1 MGP_CBAJ_G0022731.1 mouse_genomes_project 16 98936062 98940085 - MGP_CBAJ_P0044667 1110004E09Rik protein_coding protein_coding MGP_CBAJ_T0044668.1 MGP_CBAJ_G0022731.1 mouse_genomes_project 16 98936079 98945120 - MGP_CBAJ_P0044668 1110004E09Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0044669.1 MGP_CBAJ_G0022731.1 mouse_genomes_project 16 98937228 98944916 - MGP_CBAJ_P0044669 1110004E09Rik protein_coding protein_coding MGP_CBAJ_T0044670.1 MGP_CBAJ_G0022731.1 mouse_genomes_project 16 98937291 98944699 - MGP_CBAJ_P0044670 1110004E09Rik protein_coding protein_coding MGP_CBAJ_T0044671.1 MGP_CBAJ_G0022731.1 mouse_genomes_project 16 98937489 98945019 - 1110004E09Rik protein_coding processed_transcript MGP_CBAJ_T0000920.1 MGP_CBAJ_G0000854.1 mouse_genomes_project 16 23049881 23051598 + TEC TEC MGP_CBAJ_T0042795.1 MGP_CBAJ_G0022226.1 mouse_genomes_project 16 8708877 8715332 + MGP_CBAJ_P0042795 Tnfrsf17 protein_coding protein_coding MGP_CBAJ_T0003575.1 MGP_CBAJ_G0003238.1 mouse_genomes_project 16 7958817 7978466 - Gm15558 antisense antisense MGP_CBAJ_T0013003.1 MGP_CBAJ_G0011115.1 mouse_genomes_project 16 46877842 46878244 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0044982.1 MGP_CBAJ_G0022790.1 mouse_genomes_project 16 106397952 106422648 - MGP_CBAJ_P0044982 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044983.1 MGP_CBAJ_G0022790.1 mouse_genomes_project 16 106397954 106422647 - MGP_CBAJ_P0044983 protein_coding protein_coding MGP_CBAJ_T0044984.1 MGP_CBAJ_G0022790.1 mouse_genomes_project 16 106397954 106422646 - MGP_CBAJ_P0044984 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044985.1 MGP_CBAJ_G0022790.1 mouse_genomes_project 16 106397954 106422647 - MGP_CBAJ_P0044985 protein_coding protein_coding MGP_CBAJ_T0044986.1 MGP_CBAJ_G0022790.1 mouse_genomes_project 16 106413573 106422646 - MGP_CBAJ_P0044986 protein_coding protein_coding MGP_CBAJ_T0044576.1 MGP_CBAJ_G0022681.1 mouse_genomes_project 16 95052611 95101305 + MGP_CBAJ_P0044576 Map3k7cl protein_coding protein_coding MGP_CBAJ_T0044416.1 MGP_CBAJ_G0022633.1 mouse_genomes_project 16 62827966 62848673 + MGP_CBAJ_P0044416 Mina protein_coding protein_coding MGP_CBAJ_T0044417.1 MGP_CBAJ_G0022633.1 mouse_genomes_project 16 62828014 62833775 + MGP_CBAJ_P0044417 Mina protein_coding protein_coding MGP_CBAJ_T0044418.1 MGP_CBAJ_G0022633.1 mouse_genomes_project 16 62828032 62847880 + MGP_CBAJ_P0044418 Mina protein_coding protein_coding MGP_CBAJ_T0044419.1 MGP_CBAJ_G0022633.1 mouse_genomes_project 16 62828278 62848502 + MGP_CBAJ_P0044419 Mina protein_coding protein_coding MGP_CBAJ_T0044420.1 MGP_CBAJ_G0022633.1 mouse_genomes_project 16 62828545 62831969 + MGP_CBAJ_P0044420 Mina protein_coding protein_coding MGP_CBAJ_T0044421.1 MGP_CBAJ_G0022633.1 mouse_genomes_project 16 62843761 62846048 + Mina protein_coding retained_intron MGP_CBAJ_T0044601.1 MGP_CBAJ_G0022698.1 mouse_genomes_project 16 96541918 96542361 - MGP_CBAJ_P0044601 Krtap19-2 protein_coding protein_coding MGP_CBAJ_T0044374.1 MGP_CBAJ_G0022606.1 mouse_genomes_project 16 61782894 61786184 - MGP_CBAJ_P0044374 Gm813 protein_coding protein_coding MGP_CBAJ_T0011290.1 MGP_CBAJ_G0009428.1 mouse_genomes_project 16 87814828 87815141 - Gm26023 misc_RNA misc_RNA MGP_CBAJ_T0042835.1 MGP_CBAJ_G0022237.1 mouse_genomes_project 16 11464229 11510516 + MGP_CBAJ_P0042835 Rrn3 protein_coding protein_coding MGP_CBAJ_T0098946.1 MGP_CBAJ_G0037201.1 mouse_genomes_project 16 21918577 21918683 + Gm23715 snRNA snRNA MGP_CBAJ_T0044351.1 MGP_CBAJ_G0022602.1 mouse_genomes_project 16 60424840 60668329 + MGP_CBAJ_P0044351 Filip1l protein_coding protein_coding MGP_CBAJ_T0044352.1 MGP_CBAJ_G0022602.1 mouse_genomes_project 16 60425024 60605392 + MGP_CBAJ_P0044352 Filip1l protein_coding protein_coding MGP_CBAJ_T0044353.1 MGP_CBAJ_G0022602.1 mouse_genomes_project 16 60640752 60668007 + MGP_CBAJ_P0044353 Filip1l protein_coding protein_coding MGP_CBAJ_T0098981.1 MGP_CBAJ_G0037236.1 mouse_genomes_project 16 100208011 100208109 + Gm23210 snRNA snRNA MGP_CBAJ_T0044526.1 MGP_CBAJ_G0022670.1 mouse_genomes_project 16 91942410 91948787 - MGP_CBAJ_P0044526 Atp5j protein_coding protein_coding MGP_CBAJ_T0044527.1 MGP_CBAJ_G0022670.1 mouse_genomes_project 16 91942415 91943358 - Atp5j protein_coding retained_intron MGP_CBAJ_T0044528.1 MGP_CBAJ_G0022670.1 mouse_genomes_project 16 91942415 91950046 - MGP_CBAJ_P0044528 Atp5j protein_coding protein_coding MGP_CBAJ_T0044529.1 MGP_CBAJ_G0022670.1 mouse_genomes_project 16 91942415 91950168 - MGP_CBAJ_P0044529 Atp5j protein_coding protein_coding MGP_CBAJ_T0044530.1 MGP_CBAJ_G0022670.1 mouse_genomes_project 16 91942418 91946155 - Atp5j protein_coding retained_intron MGP_CBAJ_T0044531.1 MGP_CBAJ_G0022670.1 mouse_genomes_project 16 91942983 91950145 - MGP_CBAJ_P0044531 Atp5j protein_coding protein_coding MGP_CBAJ_T0044532.1 MGP_CBAJ_G0022670.1 mouse_genomes_project 16 91944087 91948424 - Atp5j protein_coding processed_transcript MGP_CBAJ_T0044533.1 MGP_CBAJ_G0022670.1 mouse_genomes_project 16 91945618 91949841 - Atp5j protein_coding retained_intron MGP_CBAJ_T0044534.1 MGP_CBAJ_G0022670.1 mouse_genomes_project 16 91945876 91949698 - Atp5j protein_coding processed_transcript MGP_CBAJ_T0044535.1 MGP_CBAJ_G0022670.1 mouse_genomes_project 16 91945916 91949548 - Atp5j protein_coding processed_transcript MGP_CBAJ_T0044536.1 MGP_CBAJ_G0022670.1 mouse_genomes_project 16 91948070 91949375 - Atp5j protein_coding retained_intron MGP_CBAJ_T0044537.1 MGP_CBAJ_G0022670.1 mouse_genomes_project 16 91948823 91950072 - Atp5j protein_coding retained_intron MGP_CBAJ_T0044218.1 MGP_CBAJ_G0022562.1 mouse_genomes_project 16 47781279 47868090 - MGP_CBAJ_P0044218 Cd96 protein_coding protein_coding MGP_CBAJ_T0044499.1 MGP_CBAJ_G0022658.1 mouse_genomes_project 16 82159528 82249552 - MGP_CBAJ_P0044499 Nrip1 protein_coding protein_coding MGP_CBAJ_T0044500.1 MGP_CBAJ_G0022658.1 mouse_genomes_project 16 82162990 82248774 - MGP_CBAJ_P0044500 Nrip1 protein_coding protein_coding MGP_CBAJ_T0044501.1 MGP_CBAJ_G0022658.1 mouse_genomes_project 16 82166774 82197730 - MGP_CBAJ_P0044501 Nrip1 protein_coding protein_coding MGP_CBAJ_T0044502.1 MGP_CBAJ_G0022658.1 mouse_genomes_project 16 82204118 82248762 - Nrip1 protein_coding retained_intron MGP_CBAJ_T0044503.1 MGP_CBAJ_G0022658.1 mouse_genomes_project 16 82204330 82248765 - Nrip1 protein_coding retained_intron MGP_CBAJ_T0044504.1 MGP_CBAJ_G0022658.1 mouse_genomes_project 16 82227410 82248774 - Nrip1 protein_coding retained_intron MGP_CBAJ_T0011287.1 MGP_CBAJ_G0009425.1 mouse_genomes_project 16 49682302 49682534 + Gm25339 misc_RNA misc_RNA MGP_CBAJ_T0042965.1 MGP_CBAJ_G0022268.1 mouse_genomes_project 16 14972073 15043216 + MGP_CBAJ_P0042965 Mapk1 protein_coding protein_coding MGP_CBAJ_T0042966.1 MGP_CBAJ_G0022268.1 mouse_genomes_project 16 14972073 15040512 + MGP_CBAJ_P0042966 Mapk1 protein_coding protein_coding MGP_CBAJ_T0042967.1 MGP_CBAJ_G0022268.1 mouse_genomes_project 16 14972258 15034803 + MGP_CBAJ_P0042967 Mapk1 protein_coding protein_coding MGP_CBAJ_T0042968.1 MGP_CBAJ_G0022268.1 mouse_genomes_project 16 15011207 15016850 + Mapk1 protein_coding retained_intron MGP_CBAJ_T0042969.1 MGP_CBAJ_G0022268.1 mouse_genomes_project 16 15018820 15019989 + Mapk1 protein_coding retained_intron MGP_CBAJ_T0042970.1 MGP_CBAJ_G0022268.1 mouse_genomes_project 16 15019160 15039626 + MGP_CBAJ_P0042970 Mapk1 protein_coding protein_coding MGP_CBAJ_T0042971.1 MGP_CBAJ_G0022268.1 mouse_genomes_project 16 15031100 15034468 + Mapk1 protein_coding processed_transcript MGP_CBAJ_T0042972.1 MGP_CBAJ_G0022268.1 mouse_genomes_project 16 15031311 15039973 + Mapk1 protein_coding processed_transcript MGP_CBAJ_T0042647.1 MGP_CBAJ_G0022186.1 mouse_genomes_project 16 1761165 1799609 + MGP_CBAJ_P0042647 Ubn1 protein_coding unknown_likely_coding MGP_CBAJ_T0006741.1 MGP_CBAJ_G0005553.1 mouse_genomes_project 16 20590282 20591138 - 2610020F03Rik lincRNA lincRNA MGP_CBAJ_T0042589.1 MGP_CBAJ_G0022172.1 mouse_genomes_project 16 1282455 1336073 + Dnaja3 protein_coding processed_transcript MGP_CBAJ_T0042593.1 MGP_CBAJ_G0022172.1 mouse_genomes_project 16 1330396 1358088 + MGP_CBAJ_P0042593 Dnaja3 protein_coding protein_coding MGP_CBAJ_T0042594.1 MGP_CBAJ_G0022172.1 mouse_genomes_project 16 1330422 1358088 + MGP_CBAJ_P0042594 Dnaja3 protein_coding protein_coding MGP_CBAJ_T0042595.1 MGP_CBAJ_G0022172.1 mouse_genomes_project 16 1330440 1342934 + Dnaja3 protein_coding retained_intron MGP_CBAJ_T0042669.1 MGP_CBAJ_G0022195.1 mouse_genomes_project 16 5468135 5496204 + MGP_CBAJ_P0042669 Mettl22 protein_coding protein_coding MGP_CBAJ_T0042670.1 MGP_CBAJ_G0022195.1 mouse_genomes_project 16 5468138 5494202 + MGP_CBAJ_P0042670 Mettl22 protein_coding protein_coding MGP_CBAJ_T0042671.1 MGP_CBAJ_G0022195.1 mouse_genomes_project 16 5468151 5489851 + MGP_CBAJ_P0042671 Mettl22 protein_coding protein_coding MGP_CBAJ_T0042672.1 MGP_CBAJ_G0022195.1 mouse_genomes_project 16 5491085 5494363 + Mettl22 protein_coding retained_intron MGP_CBAJ_T0042673.1 MGP_CBAJ_G0022195.1 mouse_genomes_project 16 5492353 5495716 + Mettl22 protein_coding retained_intron MGP_CBAJ_T0044147.1 MGP_CBAJ_G0022547.1 mouse_genomes_project 16 46621625 46641120 + MGP_CBAJ_P0044147 Cd200r3 protein_coding protein_coding MGP_CBAJ_T0044148.1 MGP_CBAJ_G0022547.1 mouse_genomes_project 16 46621625 46642513 + MGP_CBAJ_P0044148 Cd200r3 protein_coding protein_coding MGP_CBAJ_T0044149.1 MGP_CBAJ_G0022547.1 mouse_genomes_project 16 46621625 46641806 + MGP_CBAJ_P0044149 Cd200r3 protein_coding protein_coding MGP_CBAJ_T0044150.1 MGP_CBAJ_G0022547.1 mouse_genomes_project 16 46621625 46641120 + MGP_CBAJ_P0044150 Cd200r3 protein_coding protein_coding MGP_CBAJ_T0044151.1 MGP_CBAJ_G0022547.1 mouse_genomes_project 16 46621625 46641806 + MGP_CBAJ_P0044151 Cd200r3 protein_coding protein_coding MGP_CBAJ_T0044152.1 MGP_CBAJ_G0022547.1 mouse_genomes_project 16 46621639 46660536 + MGP_CBAJ_P0044152 Cd200r3 protein_coding protein_coding MGP_CBAJ_T0044153.1 MGP_CBAJ_G0022547.1 mouse_genomes_project 16 46621653 46660508 + MGP_CBAJ_P0044153 Cd200r3 protein_coding protein_coding MGP_CBAJ_T0044154.1 MGP_CBAJ_G0022547.1 mouse_genomes_project 16 46621689 46642728 + MGP_CBAJ_P0044154 Cd200r3 protein_coding protein_coding MGP_CBAJ_T0044155.1 MGP_CBAJ_G0022547.1 mouse_genomes_project 16 46621696 46637305 + MGP_CBAJ_P0044155 Cd200r3 protein_coding protein_coding MGP_CBAJ_T0044156.1 MGP_CBAJ_G0022547.1 mouse_genomes_project 16 46641691 46643292 + Cd200r3 protein_coding retained_intron MGP_CBAJ_T0043439.1 MGP_CBAJ_G0022369.1 mouse_genomes_project 16 20775694 20899444 - Igf2bp2 protein_coding retained_intron MGP_CBAJ_T0043440.1 MGP_CBAJ_G0022369.1 mouse_genomes_project 16 20775728 20811009 - Igf2bp2 protein_coding retained_intron MGP_CBAJ_T0043441.1 MGP_CBAJ_G0022369.1 mouse_genomes_project 16 20777447 20899388 - MGP_CBAJ_P0043441 Igf2bp2 protein_coding protein_coding MGP_CBAJ_T0043442.1 MGP_CBAJ_G0022369.1 mouse_genomes_project 16 20778020 20780352 - Igf2bp2 protein_coding retained_intron MGP_CBAJ_T0043443.1 MGP_CBAJ_G0022369.1 mouse_genomes_project 16 20797912 20801013 - Igf2bp2 protein_coding retained_intron MGP_CBAJ_T0043444.1 MGP_CBAJ_G0022369.1 mouse_genomes_project 16 20805836 20870698 - Igf2bp2 protein_coding processed_transcript MGP_CBAJ_T0043445.1 MGP_CBAJ_G0022369.1 mouse_genomes_project 16 20884996 20899417 - Igf2bp2 protein_coding processed_transcript MGP_CBAJ_T0043446.1 MGP_CBAJ_G0022369.1 mouse_genomes_project 16 20897305 20899400 - Igf2bp2 protein_coding retained_intron MGP_CBAJ_T0010038.1 MGP_CBAJ_G0008176.1 mouse_genomes_project 16 84139921 84140026 + Gm25025 miRNA miRNA MGP_CBAJ_T0043876.1 MGP_CBAJ_G0022478.1 mouse_genomes_project 16 36571342 36573129 + MGP_CBAJ_P0043876 Wdr5b protein_coding protein_coding MGP_CBAJ_T0006748.1 MGP_CBAJ_G0005560.1 mouse_genomes_project 16 29900388 29906779 - Gm26562 lincRNA lincRNA MGP_CBAJ_T0012960.1 MGP_CBAJ_G0011072.1 mouse_genomes_project 16 11765067 11766278 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0043005.1 MGP_CBAJ_G0022275.1 mouse_genomes_project 16 15162411 15233785 - MGP_CBAJ_P0043005 Ube2l3 protein_coding protein_coding MGP_CBAJ_T0043006.1 MGP_CBAJ_G0022275.1 mouse_genomes_project 16 15162413 15232628 - MGP_CBAJ_P0043006 Ube2l3 protein_coding protein_coding MGP_CBAJ_T0043007.1 MGP_CBAJ_G0022275.1 mouse_genomes_project 16 15163708 15232630 - MGP_CBAJ_P0043007 Ube2l3 protein_coding protein_coding MGP_CBAJ_T0043008.1 MGP_CBAJ_G0022275.1 mouse_genomes_project 16 15167985 15232609 - Ube2l3 protein_coding retained_intron MGP_CBAJ_T0043614.1 MGP_CBAJ_G0022417.1 mouse_genomes_project 16 30365977 30369052 + MGP_CBAJ_P0043614 Fam43a protein_coding protein_coding MGP_CBAJ_T0043201.1 MGP_CBAJ_G0022313.1 mouse_genomes_project 16 16642547 16703659 + MGP_CBAJ_P0043201 Txnrd2 protein_coding protein_coding MGP_CBAJ_T0043202.1 MGP_CBAJ_G0022313.1 mouse_genomes_project 16 16642580 16703665 + MGP_CBAJ_P0043202 Txnrd2 protein_coding protein_coding MGP_CBAJ_T0043203.1 MGP_CBAJ_G0022313.1 mouse_genomes_project 16 16642580 16703662 + MGP_CBAJ_P0043203 Txnrd2 protein_coding protein_coding MGP_CBAJ_T0043204.1 MGP_CBAJ_G0022313.1 mouse_genomes_project 16 16642601 16681058 + MGP_CBAJ_P0043204 Txnrd2 protein_coding protein_coding MGP_CBAJ_T0043205.1 MGP_CBAJ_G0022313.1 mouse_genomes_project 16 16642601 16703659 + MGP_CBAJ_P0043205 Txnrd2 protein_coding protein_coding MGP_CBAJ_T0043206.1 MGP_CBAJ_G0022313.1 mouse_genomes_project 16 16642601 16703659 + MGP_CBAJ_P0043206 Txnrd2 protein_coding protein_coding MGP_CBAJ_T0043207.1 MGP_CBAJ_G0022313.1 mouse_genomes_project 16 16642604 16703663 + MGP_CBAJ_P0043207 Txnrd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043208.1 MGP_CBAJ_G0022313.1 mouse_genomes_project 16 16642608 16703662 + MGP_CBAJ_P0043208 Txnrd2 protein_coding protein_coding MGP_CBAJ_T0043209.1 MGP_CBAJ_G0022313.1 mouse_genomes_project 16 16642625 16662253 + MGP_CBAJ_P0043209 Txnrd2 protein_coding protein_coding MGP_CBAJ_T0043210.1 MGP_CBAJ_G0022313.1 mouse_genomes_project 16 16644860 16662251 + MGP_CBAJ_P0043210 Txnrd2 protein_coding protein_coding MGP_CBAJ_T0043211.1 MGP_CBAJ_G0022313.1 mouse_genomes_project 16 16645088 16667796 + MGP_CBAJ_P0043211 Txnrd2 protein_coding protein_coding MGP_CBAJ_T0043212.1 MGP_CBAJ_G0022313.1 mouse_genomes_project 16 16665390 16667039 + MGP_CBAJ_P0043212 Txnrd2 protein_coding protein_coding MGP_CBAJ_T0043213.1 MGP_CBAJ_G0022313.1 mouse_genomes_project 16 16676628 16699281 + Txnrd2 protein_coding processed_transcript MGP_CBAJ_T0043214.1 MGP_CBAJ_G0022313.1 mouse_genomes_project 16 16676634 16699327 + Txnrd2 protein_coding processed_transcript MGP_CBAJ_T0043215.1 MGP_CBAJ_G0022313.1 mouse_genomes_project 16 16696412 16699290 + Txnrd2 protein_coding processed_transcript MGP_CBAJ_T0043216.1 MGP_CBAJ_G0022313.1 mouse_genomes_project 16 16696442 16699279 + Txnrd2 protein_coding processed_transcript MGP_CBAJ_T0044376.1 MGP_CBAJ_G0022608.1 mouse_genomes_project 16 61838622 61851224 + MGP_CBAJ_P0044376 Cpox protein_coding protein_coding MGP_CBAJ_T0017230.1 MGP_CBAJ_G0015053.1 mouse_genomes_project 16 16201023 16202172 + Gm15954 processed_transcript processed_transcript MGP_CBAJ_T0098158.1 MGP_CBAJ_G0036431.1 mouse_genomes_project 16 33256209 33256608 - Gm23916 ribozyme ribozyme MGP_CBAJ_T0006747.1 MGP_CBAJ_G0005559.1 mouse_genomes_project 16 29894639 29899778 + 1700025H01Rik lincRNA lincRNA MGP_CBAJ_T0000019.1 MGP_CBAJ_G0000014.1 mouse_genomes_project 16 17516073 17516531 - MGP_CBAJ_P0000019 Iglc2 IG_C_gene IG_C_gene MGP_CBAJ_T0000020.1 MGP_CBAJ_G0000014.1 mouse_genomes_project 16 17516078 17518029 - MGP_CBAJ_P0000020 Iglc2 IG_C_gene IG_C_gene MGP_CBAJ_T0010019.1 MGP_CBAJ_G0008157.1 mouse_genomes_project 16 43716613 43716721 - Mir6540 miRNA miRNA MGP_CBAJ_T0000038.1 MGP_CBAJ_G0000030.1 mouse_genomes_project 16 17357054 17357092 - MGP_CBAJ_P0000038 Iglj3p IG_J_gene IG_J_gene MGP_CBAJ_T0044605.1 MGP_CBAJ_G0022702.1 mouse_genomes_project 16 96596053 96596221 - MGP_CBAJ_P0044605 Krtap19-9a protein_coding protein_coding MGP_CBAJ_T0098955.1 MGP_CBAJ_G0037210.1 mouse_genomes_project 16 36879281 36879386 - Gm24801 snRNA snRNA MGP_CBAJ_T0012975.1 MGP_CBAJ_G0011087.1 mouse_genomes_project 16 18074052 18074719 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0044163.1 MGP_CBAJ_G0022549.1 mouse_genomes_project 16 46811886 46831235 - MGP_CBAJ_P0044163 Slc35a5 protein_coding protein_coding MGP_CBAJ_T0044164.1 MGP_CBAJ_G0022549.1 mouse_genomes_project 16 46814260 46831095 - MGP_CBAJ_P0044164 Slc35a5 protein_coding protein_coding MGP_CBAJ_T0044165.1 MGP_CBAJ_G0022549.1 mouse_genomes_project 16 46816328 46824236 - Slc35a5 protein_coding retained_intron MGP_CBAJ_T0044166.1 MGP_CBAJ_G0022549.1 mouse_genomes_project 16 46816471 46831173 - MGP_CBAJ_P0044166 Slc35a5 protein_coding protein_coding MGP_CBAJ_T0044167.1 MGP_CBAJ_G0022549.1 mouse_genomes_project 16 46816491 46830712 - MGP_CBAJ_P0044167 Slc35a5 protein_coding protein_coding MGP_CBAJ_T0044168.1 MGP_CBAJ_G0022549.1 mouse_genomes_project 16 46824876 46831184 - Slc35a5 protein_coding retained_intron MGP_CBAJ_T0044169.1 MGP_CBAJ_G0022549.1 mouse_genomes_project 16 46824919 46830982 - MGP_CBAJ_P0044169 Slc35a5 protein_coding protein_coding MGP_CBAJ_T0044170.1 MGP_CBAJ_G0022549.1 mouse_genomes_project 16 46827004 46831129 - Slc35a5 protein_coding retained_intron MGP_CBAJ_T0003590.1 MGP_CBAJ_G0003251.1 mouse_genomes_project 16 32043795 32051156 + Gm15729 antisense antisense MGP_CBAJ_T0097978.1 MGP_CBAJ_G0036251.1 mouse_genomes_project 16 91932687 91932785 + Gm25908 rRNA rRNA MGP_CBAJ_T0098939.1 MGP_CBAJ_G0037194.1 mouse_genomes_project 16 15240123 15240230 - Gm22129 snRNA snRNA MGP_CBAJ_T0044519.1 MGP_CBAJ_G0022667.1 mouse_genomes_project 16 87749139 88220440 + MGP_CBAJ_P0044519 Ncam2 protein_coding protein_coding MGP_CBAJ_T0044520.1 MGP_CBAJ_G0022667.1 mouse_genomes_project 16 87749139 88255435 + MGP_CBAJ_P0044520 Ncam2 protein_coding protein_coding MGP_CBAJ_T0044007.1 MGP_CBAJ_G0022516.1 mouse_genomes_project 16 39473386 39480666 - MGP_CBAJ_P0044007 Adprh protein_coding protein_coding MGP_CBAJ_T0043784.1 MGP_CBAJ_G0022456.1 mouse_genomes_project 16 33401854 33454019 + MGP_CBAJ_P0043784 Snx4 protein_coding protein_coding MGP_CBAJ_T0044410.1 MGP_CBAJ_G0022627.1 mouse_genomes_project 16 62623161 62624085 - MGP_CBAJ_P0044410 Olfr202 protein_coding protein_coding MGP_CBAJ_T0044625.1 MGP_CBAJ_G0022720.1 mouse_genomes_project 16 97246638 97247217 - MGP_CBAJ_P0044625 Krtap8-1 protein_coding protein_coding MGP_CBAJ_T0043728.1 MGP_CBAJ_G0022446.1 mouse_genomes_project 16 32760842 32826352 + protein_coding processed_transcript MGP_CBAJ_T0043729.1 MGP_CBAJ_G0022446.1 mouse_genomes_project 16 32800166 32826517 + MGP_CBAJ_P0043729 protein_coding protein_coding MGP_CBAJ_T0043730.1 MGP_CBAJ_G0022446.1 mouse_genomes_project 16 32820149 32826510 + protein_coding processed_transcript MGP_CBAJ_T0043731.1 MGP_CBAJ_G0022446.1 mouse_genomes_project 16 32820228 32820827 + protein_coding processed_transcript MGP_CBAJ_T0043733.1 MGP_CBAJ_G0022446.1 mouse_genomes_project 16 32821403 32822798 + protein_coding retained_intron MGP_CBAJ_T0043734.1 MGP_CBAJ_G0022446.1 mouse_genomes_project 16 32822488 32823001 + protein_coding retained_intron MGP_CBAJ_T0043520.1 MGP_CBAJ_G0022392.1 mouse_genomes_project 16 24450953 24608407 + MGP_CBAJ_P0043520 Tprg protein_coding protein_coding MGP_CBAJ_T0043521.1 MGP_CBAJ_G0022392.1 mouse_genomes_project 16 24450957 24488979 + Tprg protein_coding retained_intron MGP_CBAJ_T0013000.1 MGP_CBAJ_G0011112.1 mouse_genomes_project 16 41123980 41124978 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0042519.1 MGP_CBAJ_G0022158.1 mouse_genomes_project 16 458773 473774 + MGP_CBAJ_P0042519 Cluap1 protein_coding protein_coding MGP_CBAJ_T0042520.1 MGP_CBAJ_G0022158.1 mouse_genomes_project 16 458797 497526 + MGP_CBAJ_P0042520 Cluap1 protein_coding protein_coding MGP_CBAJ_T0042521.1 MGP_CBAJ_G0022158.1 mouse_genomes_project 16 459011 463545 + Cluap1 protein_coding retained_intron MGP_CBAJ_T0042522.1 MGP_CBAJ_G0022158.1 mouse_genomes_project 16 459048 479819 + MGP_CBAJ_P0042522 Cluap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042523.1 MGP_CBAJ_G0022158.1 mouse_genomes_project 16 459078 473830 + MGP_CBAJ_P0042523 Cluap1 protein_coding protein_coding MGP_CBAJ_T0042536.1 MGP_CBAJ_G0022161.1 mouse_genomes_project 16 582476 582843 - MGP_CBAJ_P0042536 Gm10076 protein_coding protein_coding MGP_CBAJ_T0044094.1 MGP_CBAJ_G0022535.1 mouse_genomes_project 16 45644483 45706956 - MGP_CBAJ_P0044094 Atp6v1a protein_coding protein_coding MGP_CBAJ_T0044095.1 MGP_CBAJ_G0022535.1 mouse_genomes_project 16 45644726 45706847 - MGP_CBAJ_P0044095 Atp6v1a protein_coding protein_coding MGP_CBAJ_T0044096.1 MGP_CBAJ_G0022535.1 mouse_genomes_project 16 45658421 45706631 - Atp6v1a protein_coding retained_intron MGP_CBAJ_T0044097.1 MGP_CBAJ_G0022535.1 mouse_genomes_project 16 45670235 45707281 - MGP_CBAJ_P0044097 Atp6v1a protein_coding protein_coding MGP_CBAJ_T0044098.1 MGP_CBAJ_G0022535.1 mouse_genomes_project 16 45670358 45706669 - MGP_CBAJ_P0044098 Atp6v1a protein_coding protein_coding MGP_CBAJ_T0044099.1 MGP_CBAJ_G0022535.1 mouse_genomes_project 16 45672428 45707356 - MGP_CBAJ_P0044099 Atp6v1a protein_coding protein_coding MGP_CBAJ_T0100230.1 MGP_CBAJ_G0038485.1 mouse_genomes_project 16 81998076 81998207 - Gm22268 snoRNA snoRNA MGP_CBAJ_T0044965.1 MGP_CBAJ_G0022784.1 mouse_genomes_project 16 105046133 105147838 + MGP_CBAJ_P0044965 B3galt5 protein_coding protein_coding MGP_CBAJ_T0044966.1 MGP_CBAJ_G0022784.1 mouse_genomes_project 16 105086850 105141756 + B3galt5 protein_coding processed_transcript MGP_CBAJ_T0044967.1 MGP_CBAJ_G0022784.1 mouse_genomes_project 16 105086987 105141757 + B3galt5 protein_coding processed_transcript MGP_CBAJ_T0044968.1 MGP_CBAJ_G0022784.1 mouse_genomes_project 16 105094288 105147836 + MGP_CBAJ_P0044968 B3galt5 protein_coding protein_coding MGP_CBAJ_T0044171.1 MGP_CBAJ_G0022550.1 mouse_genomes_project 16 46831313 46861015 + MGP_CBAJ_P0044171 Atg3 protein_coding protein_coding MGP_CBAJ_T0044172.1 MGP_CBAJ_G0022550.1 mouse_genomes_project 16 46838393 46860370 + Atg3 protein_coding retained_intron MGP_CBAJ_T0043891.1 MGP_CBAJ_G0022488.1 mouse_genomes_project 16 37160779 37175471 - MGP_CBAJ_P0043891 protein_coding protein_coding MGP_CBAJ_T0044724.1 MGP_CBAJ_G0022746.1 mouse_genomes_project 16 99757676 99792074 + MGP_CBAJ_P0044724 Son protein_coding protein_coding MGP_CBAJ_T0044725.1 MGP_CBAJ_G0022746.1 mouse_genomes_project 16 99758048 99792062 + MGP_CBAJ_P0044725 Son protein_coding nonsense_mediated_decay MGP_CBAJ_T0044726.1 MGP_CBAJ_G0022746.1 mouse_genomes_project 16 99758048 99792062 + MGP_CBAJ_P0044726 Son protein_coding protein_coding MGP_CBAJ_T0044727.1 MGP_CBAJ_G0022746.1 mouse_genomes_project 16 99758048 99778224 + MGP_CBAJ_P0044727 Son protein_coding protein_coding MGP_CBAJ_T0044728.1 MGP_CBAJ_G0022746.1 mouse_genomes_project 16 99758049 99776552 + MGP_CBAJ_P0044728 Son protein_coding protein_coding MGP_CBAJ_T0044729.1 MGP_CBAJ_G0022746.1 mouse_genomes_project 16 99758054 99792088 + MGP_CBAJ_P0044729 Son protein_coding protein_coding MGP_CBAJ_T0044730.1 MGP_CBAJ_G0022746.1 mouse_genomes_project 16 99772467 99792059 + MGP_CBAJ_P0044730 Son protein_coding nonsense_mediated_decay MGP_CBAJ_T0044731.1 MGP_CBAJ_G0022746.1 mouse_genomes_project 16 99776737 99785007 + Son protein_coding processed_transcript MGP_CBAJ_T0044732.1 MGP_CBAJ_G0022746.1 mouse_genomes_project 16 99784214 99785576 + Son protein_coding processed_transcript MGP_CBAJ_T0044733.1 MGP_CBAJ_G0022746.1 mouse_genomes_project 16 99786309 99790478 + Son protein_coding processed_transcript MGP_CBAJ_T0044734.1 MGP_CBAJ_G0022746.1 mouse_genomes_project 16 99786539 99790986 + Son protein_coding processed_transcript MGP_CBAJ_T0044735.1 MGP_CBAJ_G0022746.1 mouse_genomes_project 16 99786975 99791367 + Son protein_coding processed_transcript MGP_CBAJ_T0044736.1 MGP_CBAJ_G0022746.1 mouse_genomes_project 16 99787799 99790301 + Son protein_coding retained_intron MGP_CBAJ_T0043685.1 MGP_CBAJ_G0022433.1 mouse_genomes_project 16 32123299 32124559 + MGP_CBAJ_P0043685 Bex6 protein_coding protein_coding MGP_CBAJ_T0098953.1 MGP_CBAJ_G0037208.1 mouse_genomes_project 16 36765025 36765132 - Gm22885 snRNA snRNA MGP_CBAJ_T0098964.1 MGP_CBAJ_G0037219.1 mouse_genomes_project 16 49400376 49400483 - Gm24651 snRNA snRNA MGP_CBAJ_T0003617.1 MGP_CBAJ_G0003271.1 mouse_genomes_project 16 71383211 71393877 + 4933411O13Rik antisense antisense MGP_CBAJ_T0003618.1 MGP_CBAJ_G0003271.1 mouse_genomes_project 16 71383217 71403905 + 4933411O13Rik antisense antisense MGP_CBAJ_T0100211.1 MGP_CBAJ_G0038466.1 mouse_genomes_project 16 39150041 39150174 + Gm25617 snoRNA snoRNA MGP_CBAJ_T0013023.1 MGP_CBAJ_G0011135.1 mouse_genomes_project 16 85178914 85179273 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100201.1 MGP_CBAJ_G0038456.1 mouse_genomes_project 16 22026135 22026264 + Gm26447 snoRNA snoRNA MGP_CBAJ_T0043410.1 MGP_CBAJ_G0022359.1 mouse_genomes_project 16 19190968 19200226 + MGP_CBAJ_P0043410 Chrd protein_coding protein_coding MGP_CBAJ_T0043411.1 MGP_CBAJ_G0022359.1 mouse_genomes_project 16 19190968 19195994 + MGP_CBAJ_P0043411 Chrd protein_coding protein_coding MGP_CBAJ_T0043412.1 MGP_CBAJ_G0022359.1 mouse_genomes_project 16 19190968 19200226 + MGP_CBAJ_P0043412 Chrd protein_coding nonsense_mediated_decay MGP_CBAJ_T0043413.1 MGP_CBAJ_G0022359.1 mouse_genomes_project 16 19194047 19200224 + Chrd protein_coding retained_intron MGP_CBAJ_T0043650.1 MGP_CBAJ_G0022424.1 mouse_genomes_project 16 31779015 31799384 + MGP_CBAJ_P0043650 Mfi2 protein_coding protein_coding MGP_CBAJ_T0098977.1 MGP_CBAJ_G0037232.1 mouse_genomes_project 16 96253825 96253909 - Gm23587 snRNA snRNA MGP_CBAJ_T0013028.1 MGP_CBAJ_G0011140.1 mouse_genomes_project 16 99600195 99601695 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0044591.1 MGP_CBAJ_G0022690.1 mouse_genomes_project 16 96361185 96361979 - MGP_CBAJ_P0044591 2310061N02Rik protein_coding protein_coding MGP_CBAJ_T0003577.1 MGP_CBAJ_G0003240.1 mouse_genomes_project 16 10980096 11000611 - antisense antisense MGP_CBAJ_T0003578.1 MGP_CBAJ_G0003240.1 mouse_genomes_project 16 10992836 11000607 - antisense antisense MGP_CBAJ_T0011280.1 MGP_CBAJ_G0009418.1 mouse_genomes_project 16 18854102 18854377 + Gm23332 misc_RNA misc_RNA MGP_CBAJ_T0043802.1 MGP_CBAJ_G0022460.1 mouse_genomes_project 16 34038750 34078466 + MGP_CBAJ_P0043802 Muc13 protein_coding protein_coding MGP_CBAJ_T0043803.1 MGP_CBAJ_G0022460.1 mouse_genomes_project 16 34039080 34078473 + MGP_CBAJ_P0043803 Muc13 protein_coding protein_coding MGP_CBAJ_T0043584.1 MGP_CBAJ_G0022410.1 mouse_genomes_project 16 29749618 29750804 + Hes1 protein_coding processed_transcript MGP_CBAJ_T0043585.1 MGP_CBAJ_G0022410.1 mouse_genomes_project 16 29749700 29753037 + MGP_CBAJ_P0043585 Hes1 protein_coding unknown_likely_coding MGP_CBAJ_T0043586.1 MGP_CBAJ_G0022410.1 mouse_genomes_project 16 29750574 29753031 + MGP_CBAJ_P0043586 Hes1 protein_coding protein_coding MGP_CBAJ_T0043587.1 MGP_CBAJ_G0022410.1 mouse_genomes_project 16 29751331 29752358 + Hes1 protein_coding retained_intron MGP_CBAJ_T0043588.1 MGP_CBAJ_G0022410.1 mouse_genomes_project 16 29751572 29752554 + Hes1 protein_coding processed_transcript MGP_CBAJ_T0042931.1 MGP_CBAJ_G0022262.1 mouse_genomes_project 16 14691446 14792793 - MGP_CBAJ_P0042931 Spag6l protein_coding protein_coding MGP_CBAJ_T0042932.1 MGP_CBAJ_G0022262.1 mouse_genomes_project 16 14706798 14792800 - Spag6l protein_coding retained_intron MGP_CBAJ_T0042933.1 MGP_CBAJ_G0022262.1 mouse_genomes_project 16 14727867 14792761 - Spag6l protein_coding processed_transcript MGP_CBAJ_T0042934.1 MGP_CBAJ_G0022262.1 mouse_genomes_project 16 14727901 14792824 - Spag6l protein_coding processed_transcript MGP_CBAJ_T0042935.1 MGP_CBAJ_G0022262.1 mouse_genomes_project 16 14778706 14792787 - Spag6l protein_coding processed_transcript MGP_CBAJ_T0042936.1 MGP_CBAJ_G0022262.1 mouse_genomes_project 16 14787190 14792936 - Spag6l protein_coding processed_transcript MGP_CBAJ_T0042937.1 MGP_CBAJ_G0022262.1 mouse_genomes_project 16 14787462 14792793 - Spag6l protein_coding processed_transcript MGP_CBAJ_T0044981.1 MGP_CBAJ_G0022789.1 mouse_genomes_project 16 106302146 106389900 + MGP_CBAJ_P0044981 Bace2 protein_coding protein_coding MGP_CBAJ_T0044072.1 MGP_CBAJ_G0022531.1 mouse_genomes_project 16 45398879 45424817 - MGP_CBAJ_P0044072 Qtrtd1 protein_coding unknown_likely_coding MGP_CBAJ_T0044073.1 MGP_CBAJ_G0022531.1 mouse_genomes_project 16 45398882 45424834 - Qtrtd1 protein_coding retained_intron MGP_CBAJ_T0044074.1 MGP_CBAJ_G0022531.1 mouse_genomes_project 16 45398882 45424871 - MGP_CBAJ_P0044074 Qtrtd1 protein_coding protein_coding MGP_CBAJ_T0044075.1 MGP_CBAJ_G0022531.1 mouse_genomes_project 16 45400259 45402742 - Qtrtd1 protein_coding retained_intron MGP_CBAJ_T0044076.1 MGP_CBAJ_G0022531.1 mouse_genomes_project 16 45400505 45475232 - Qtrtd1 protein_coding retained_intron MGP_CBAJ_T0044077.1 MGP_CBAJ_G0022531.1 mouse_genomes_project 16 45402693 45404582 - Qtrtd1 protein_coding retained_intron MGP_CBAJ_T0044078.1 MGP_CBAJ_G0022531.1 mouse_genomes_project 16 45404132 45424842 - Qtrtd1 protein_coding retained_intron MGP_CBAJ_T0044079.1 MGP_CBAJ_G0022531.1 mouse_genomes_project 16 45406858 45412150 - Qtrtd1 protein_coding retained_intron MGP_CBAJ_T0044080.1 MGP_CBAJ_G0022531.1 mouse_genomes_project 16 45411968 45424841 - MGP_CBAJ_P0044080 Qtrtd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044081.1 MGP_CBAJ_G0022531.1 mouse_genomes_project 16 45415484 45424842 - Qtrtd1 protein_coding retained_intron MGP_CBAJ_T0043467.1 MGP_CBAJ_G0022376.1 mouse_genomes_project 16 21733487 21742750 + MGP_CBAJ_P0043467 Ahsg protein_coding protein_coding MGP_CBAJ_T0006740.1 MGP_CBAJ_G0005552.1 mouse_genomes_project 16 20521044 20523647 - Gm26744 lincRNA lincRNA MGP_CBAJ_T0043233.1 MGP_CBAJ_G0022319.1 mouse_genomes_project 16 17028456 17029870 + MGP_CBAJ_P0043233 Cldn5 protein_coding protein_coding MGP_CBAJ_T0000918.1 MGP_CBAJ_G0000852.1 mouse_genomes_project 16 17550055 17553525 + TEC TEC MGP_CBAJ_T0044506.1 MGP_CBAJ_G0022660.1 mouse_genomes_project 16 83630274 83643757 - MGP_CBAJ_P0044506 Gm11146 protein_coding protein_coding MGP_CBAJ_T0101060.1 MGP_CBAJ_G0039281.1 mouse_genomes_project 16 102915962 102916320 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0043290.1 MGP_CBAJ_G0022342.1 mouse_genomes_project 16 18660751 18683277 - MGP_CBAJ_P0043290 Parl protein_coding nonsense_mediated_decay MGP_CBAJ_T0043291.1 MGP_CBAJ_G0022342.1 mouse_genomes_project 16 18660751 18683319 - MGP_CBAJ_P0043291 Parl protein_coding protein_coding MGP_CBAJ_T0043292.1 MGP_CBAJ_G0022342.1 mouse_genomes_project 16 18660934 18664176 - Parl protein_coding retained_intron MGP_CBAJ_T0043293.1 MGP_CBAJ_G0022342.1 mouse_genomes_project 16 18663675 18683272 - Parl protein_coding retained_intron MGP_CBAJ_T0043294.1 MGP_CBAJ_G0022342.1 mouse_genomes_project 16 18666459 18669172 - Parl protein_coding retained_intron MGP_CBAJ_T0043295.1 MGP_CBAJ_G0022342.1 mouse_genomes_project 16 18667861 18682261 - Parl protein_coding processed_transcript MGP_CBAJ_T0043296.1 MGP_CBAJ_G0022342.1 mouse_genomes_project 16 18667887 18683286 - MGP_CBAJ_P0043296 Parl protein_coding nonsense_mediated_decay MGP_CBAJ_T0043297.1 MGP_CBAJ_G0022342.1 mouse_genomes_project 16 18673851 18679097 - Parl protein_coding retained_intron MGP_CBAJ_T0043298.1 MGP_CBAJ_G0022342.1 mouse_genomes_project 16 18678528 18682745 - Parl protein_coding processed_transcript MGP_CBAJ_T0043299.1 MGP_CBAJ_G0022342.1 mouse_genomes_project 16 18679055 18683293 - Parl protein_coding retained_intron MGP_CBAJ_T0043534.1 MGP_CBAJ_G0022395.1 mouse_genomes_project 16 25656454 25671935 - MGP_CBAJ_P0043534 Cldn1 protein_coding protein_coding MGP_CBAJ_T0044585.1 MGP_CBAJ_G0022684.1 mouse_genomes_project 16 96132866 96134038 - MGP_CBAJ_P0044585 Cldn17 protein_coding protein_coding MGP_CBAJ_T0044794.1 MGP_CBAJ_G0022753.1 mouse_genomes_project 16 100489341 100496941 + MGP_CBAJ_P0044794 Kcne2 protein_coding protein_coding MGP_CBAJ_T0044795.1 MGP_CBAJ_G0022753.1 mouse_genomes_project 16 100494389 100496941 + MGP_CBAJ_P0044795 Kcne2 protein_coding protein_coding MGP_CBAJ_T0044888.1 MGP_CBAJ_G0022773.1 mouse_genomes_project 16 103142714 103268092 + MGP_CBAJ_P0044888 Dyrk1a protein_coding protein_coding MGP_CBAJ_T0044889.1 MGP_CBAJ_G0022773.1 mouse_genomes_project 16 103143232 103265232 + MGP_CBAJ_P0044889 Dyrk1a protein_coding protein_coding MGP_CBAJ_T0044890.1 MGP_CBAJ_G0022773.1 mouse_genomes_project 16 103143617 103238451 + MGP_CBAJ_P0044890 Dyrk1a protein_coding protein_coding MGP_CBAJ_T0044891.1 MGP_CBAJ_G0022773.1 mouse_genomes_project 16 103143660 103268542 + MGP_CBAJ_P0044891 Dyrk1a protein_coding protein_coding MGP_CBAJ_T0044892.1 MGP_CBAJ_G0022773.1 mouse_genomes_project 16 103143660 103241335 + MGP_CBAJ_P0044892 Dyrk1a protein_coding protein_coding MGP_CBAJ_T0044893.1 MGP_CBAJ_G0022773.1 mouse_genomes_project 16 103241399 103252527 + Dyrk1a protein_coding retained_intron MGP_CBAJ_T0044609.1 MGP_CBAJ_G0022706.1 mouse_genomes_project 16 96688291 96688861 + MGP_CBAJ_P0044609 Gm10229 protein_coding protein_coding MGP_CBAJ_T0011282.1 MGP_CBAJ_G0009420.1 mouse_genomes_project 16 22398099 22398413 - Gm23430 misc_RNA misc_RNA MGP_CBAJ_T0098950.1 MGP_CBAJ_G0037205.1 mouse_genomes_project 16 35661139 35661267 - Gm25179 snRNA snRNA MGP_CBAJ_T0043860.1 MGP_CBAJ_G0022476.1 mouse_genomes_project 16 36450264 36488406 + MGP_CBAJ_P0043860 Parp9 protein_coding protein_coding MGP_CBAJ_T0043861.1 MGP_CBAJ_G0022476.1 mouse_genomes_project 16 36450282 36459029 + Parp9 protein_coding retained_intron MGP_CBAJ_T0043862.1 MGP_CBAJ_G0022476.1 mouse_genomes_project 16 36450313 36464689 + MGP_CBAJ_P0043862 Parp9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043863.1 MGP_CBAJ_G0022476.1 mouse_genomes_project 16 36456257 36464924 + Parp9 protein_coding processed_transcript MGP_CBAJ_T0043864.1 MGP_CBAJ_G0022476.1 mouse_genomes_project 16 36456345 36492409 + MGP_CBAJ_P0043864 Parp9 protein_coding protein_coding MGP_CBAJ_T0043865.1 MGP_CBAJ_G0022476.1 mouse_genomes_project 16 36465286 36473838 + MGP_CBAJ_P0043865 Parp9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0098951.1 MGP_CBAJ_G0037206.1 mouse_genomes_project 16 35827398 35827551 - Gm23518 snRNA snRNA MGP_CBAJ_T0006759.1 MGP_CBAJ_G0005570.1 mouse_genomes_project 16 52698729 52746568 + G730013B05Rik lincRNA lincRNA MGP_CBAJ_T0043155.1 MGP_CBAJ_G0022305.1 mouse_genomes_project 16 16378744 16379888 + MGP_CBAJ_P0043155 Ccdc188 protein_coding protein_coding MGP_CBAJ_T0044838.1 MGP_CBAJ_G0022766.1 mouse_genomes_project 16 102405347 102416007 - MGP_CBAJ_P0044838 Cldn14 protein_coding protein_coding MGP_CBAJ_T0044839.1 MGP_CBAJ_G0022766.1 mouse_genomes_project 16 102405347 102415757 - MGP_CBAJ_P0044839 Cldn14 protein_coding protein_coding MGP_CBAJ_T0044840.1 MGP_CBAJ_G0022766.1 mouse_genomes_project 16 102405348 102504217 - MGP_CBAJ_P0044840 Cldn14 protein_coding protein_coding MGP_CBAJ_T0044841.1 MGP_CBAJ_G0022766.1 mouse_genomes_project 16 102406065 102415757 - Cldn14 protein_coding processed_transcript MGP_CBAJ_T0044842.1 MGP_CBAJ_G0022766.1 mouse_genomes_project 16 102406123 102416007 - Cldn14 protein_coding processed_transcript MGP_CBAJ_T0100197.1 MGP_CBAJ_G0038452.1 mouse_genomes_project 16 19135778 19135853 + Snord66 snoRNA snoRNA MGP_CBAJ_T0000917.1 MGP_CBAJ_G0000851.1 mouse_genomes_project 16 16024526 16025692 + TEC TEC MGP_CBAJ_T0044246.1 MGP_CBAJ_G0022574.1 mouse_genomes_project 16 50989086 51014552 + MGP_CBAJ_P0044246 C330027C09Rik protein_coding protein_coding MGP_CBAJ_T0044247.1 MGP_CBAJ_G0022574.1 mouse_genomes_project 16 50989089 51014552 + MGP_CBAJ_P0044247 C330027C09Rik protein_coding protein_coding MGP_CBAJ_T0044248.1 MGP_CBAJ_G0022574.1 mouse_genomes_project 16 50989124 50995940 + MGP_CBAJ_P0044248 C330027C09Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0044249.1 MGP_CBAJ_G0022574.1 mouse_genomes_project 16 50995718 50996913 + C330027C09Rik protein_coding retained_intron MGP_CBAJ_T0044250.1 MGP_CBAJ_G0022574.1 mouse_genomes_project 16 51003242 51014498 + C330027C09Rik protein_coding retained_intron MGP_CBAJ_T0044251.1 MGP_CBAJ_G0022574.1 mouse_genomes_project 16 51005274 51008157 + C330027C09Rik protein_coding retained_intron MGP_CBAJ_T0044252.1 MGP_CBAJ_G0022574.1 mouse_genomes_project 16 51008161 51009217 + C330027C09Rik protein_coding retained_intron MGP_CBAJ_T0044253.1 MGP_CBAJ_G0022574.1 mouse_genomes_project 16 51010704 51014556 + C330027C09Rik protein_coding retained_intron MGP_CBAJ_T0044844.1 MGP_CBAJ_G0022768.1 mouse_genomes_project 16 102646265 102830010 - MGP_CBAJ_P0044844 Hlcs protein_coding protein_coding MGP_CBAJ_T0010045.1 MGP_CBAJ_G0008183.1 mouse_genomes_project 16 102689234 102689344 - Gm23062 miRNA miRNA MGP_CBAJ_T0044803.1 MGP_CBAJ_G0022758.1 mouse_genomes_project 16 100708327 100753710 + MGP_CBAJ_P0044803 Clic6 protein_coding protein_coding MGP_CBAJ_T0044804.1 MGP_CBAJ_G0022758.1 mouse_genomes_project 16 100723066 100768513 + MGP_CBAJ_P0044804 Clic6 protein_coding protein_coding MGP_CBAJ_T0042645.1 MGP_CBAJ_G0022185.1 mouse_genomes_project 16 1723110 1760323 - MGP_CBAJ_P0042645 Glyr1 protein_coding protein_coding MGP_CBAJ_T0042646.1 MGP_CBAJ_G0022185.1 mouse_genomes_project 16 1723110 1760323 - MGP_CBAJ_P0042646 Glyr1 protein_coding protein_coding MGP_CBAJ_T0042896.1 MGP_CBAJ_G0022251.1 mouse_genomes_project 16 12669018 12688778 + MGP_CBAJ_P0042896 Efcab1 protein_coding protein_coding MGP_CBAJ_T0043217.1 MGP_CBAJ_G0022314.1 mouse_genomes_project 16 16727420 16810120 + MGP_CBAJ_P0043217 Gnb1l protein_coding protein_coding MGP_CBAJ_T0043218.1 MGP_CBAJ_G0022314.1 mouse_genomes_project 16 16727475 16795829 + MGP_CBAJ_P0043218 Gnb1l protein_coding protein_coding MGP_CBAJ_T0043219.1 MGP_CBAJ_G0022314.1 mouse_genomes_project 16 16727530 16796013 + Gnb1l protein_coding processed_transcript MGP_CBAJ_T0043220.1 MGP_CBAJ_G0022314.1 mouse_genomes_project 16 16727538 16795879 + MGP_CBAJ_P0043220 Gnb1l protein_coding protein_coding MGP_CBAJ_T0043221.1 MGP_CBAJ_G0022314.1 mouse_genomes_project 16 16727538 16810068 + MGP_CBAJ_P0043221 Gnb1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0043222.1 MGP_CBAJ_G0022314.1 mouse_genomes_project 16 16727540 16810120 + MGP_CBAJ_P0043222 Gnb1l protein_coding protein_coding MGP_CBAJ_T0043223.1 MGP_CBAJ_G0022314.1 mouse_genomes_project 16 16727540 16810120 + MGP_CBAJ_P0043223 Gnb1l protein_coding protein_coding MGP_CBAJ_T0043224.1 MGP_CBAJ_G0022314.1 mouse_genomes_project 16 16727543 16795952 + Gnb1l protein_coding processed_transcript MGP_CBAJ_T0043225.1 MGP_CBAJ_G0022314.1 mouse_genomes_project 16 16727549 16787668 + MGP_CBAJ_P0043225 Gnb1l protein_coding protein_coding MGP_CBAJ_T0043227.1 MGP_CBAJ_G0022314.1 mouse_genomes_project 16 16727554 16807979 + MGP_CBAJ_P0043227 Gnb1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0043228.1 MGP_CBAJ_G0022314.1 mouse_genomes_project 16 16792183 16796025 + Gnb1l protein_coding processed_transcript MGP_CBAJ_T0044650.1 MGP_CBAJ_G0022728.1 mouse_genomes_project 16 98708275 98722920 + Mrap protein_coding processed_transcript MGP_CBAJ_T0044651.1 MGP_CBAJ_G0022728.1 mouse_genomes_project 16 98708275 98726164 + Mrap protein_coding processed_transcript MGP_CBAJ_T0044652.1 MGP_CBAJ_G0022728.1 mouse_genomes_project 16 98708275 98725675 + Mrap protein_coding processed_transcript MGP_CBAJ_T0044653.1 MGP_CBAJ_G0022728.1 mouse_genomes_project 16 98708275 98726164 + MGP_CBAJ_P0044653 Mrap protein_coding protein_coding MGP_CBAJ_T0043247.1 MGP_CBAJ_G0022322.1 mouse_genomes_project 16 17087459 17095093 + MGP_CBAJ_P0043247 2510002D24Rik protein_coding protein_coding MGP_CBAJ_T0043248.1 MGP_CBAJ_G0022322.1 mouse_genomes_project 16 17087462 17088269 + MGP_CBAJ_P0043248 2510002D24Rik protein_coding protein_coding MGP_CBAJ_T0043249.1 MGP_CBAJ_G0022322.1 mouse_genomes_project 16 17087462 17094978 + MGP_CBAJ_P0043249 2510002D24Rik protein_coding protein_coding MGP_CBAJ_T0043251.1 MGP_CBAJ_G0022322.1 mouse_genomes_project 16 17087536 17094725 + 2510002D24Rik protein_coding retained_intron MGP_CBAJ_T0003584.1 MGP_CBAJ_G0003246.1 mouse_genomes_project 16 16842199 16862530 + 4930588K23Rik antisense antisense MGP_CBAJ_T0044980.1 MGP_CBAJ_G0022788.1 mouse_genomes_project 16 105448490 106090131 - MGP_CBAJ_P0044980 Dscam protein_coding protein_coding MGP_CBAJ_T0043757.1 MGP_CBAJ_G0022451.1 mouse_genomes_project 16 32978637 33103833 + MGP_CBAJ_P0043757 Lrch3 protein_coding protein_coding MGP_CBAJ_T0043758.1 MGP_CBAJ_G0022451.1 mouse_genomes_project 16 32978659 33101329 + MGP_CBAJ_P0043758 Lrch3 protein_coding protein_coding MGP_CBAJ_T0043759.1 MGP_CBAJ_G0022451.1 mouse_genomes_project 16 32978659 33101329 + MGP_CBAJ_P0043759 Lrch3 protein_coding protein_coding MGP_CBAJ_T0043760.1 MGP_CBAJ_G0022451.1 mouse_genomes_project 16 32978660 33073124 + Lrch3 protein_coding retained_intron MGP_CBAJ_T0043761.1 MGP_CBAJ_G0022451.1 mouse_genomes_project 16 32978664 33052884 + MGP_CBAJ_P0043761 Lrch3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043762.1 MGP_CBAJ_G0022451.1 mouse_genomes_project 16 32978679 33100885 + MGP_CBAJ_P0043762 Lrch3 protein_coding protein_coding MGP_CBAJ_T0043763.1 MGP_CBAJ_G0022451.1 mouse_genomes_project 16 32978679 33100676 + MGP_CBAJ_P0043763 Lrch3 protein_coding protein_coding MGP_CBAJ_T0043764.1 MGP_CBAJ_G0022451.1 mouse_genomes_project 16 33031591 33040791 + Lrch3 protein_coding processed_transcript MGP_CBAJ_T0043765.1 MGP_CBAJ_G0022451.1 mouse_genomes_project 16 33063463 33082662 + MGP_CBAJ_P0043765 Lrch3 protein_coding protein_coding MGP_CBAJ_T0043766.1 MGP_CBAJ_G0022451.1 mouse_genomes_project 16 33063491 33082604 + MGP_CBAJ_P0043766 Lrch3 protein_coding protein_coding MGP_CBAJ_T0043767.1 MGP_CBAJ_G0022451.1 mouse_genomes_project 16 33070080 33082715 + MGP_CBAJ_P0043767 Lrch3 protein_coding protein_coding MGP_CBAJ_T0043589.1 MGP_CBAJ_G0022411.1 mouse_genomes_project 16 29964443 29975865 - MGP_CBAJ_P0043589 Cpn2 protein_coding protein_coding MGP_CBAJ_T0097778.1 MGP_CBAJ_G0036051.1 mouse_genomes_project 16 31855564 31855989 - pseudogene pseudogene MGP_CBAJ_T0006760.1 MGP_CBAJ_G0005571.1 mouse_genomes_project 16 52947423 52961801 - Dubr lincRNA lincRNA MGP_CBAJ_T0006761.1 MGP_CBAJ_G0005571.1 mouse_genomes_project 16 52947428 52961711 - Dubr lincRNA lincRNA MGP_CBAJ_T0006762.1 MGP_CBAJ_G0005571.1 mouse_genomes_project 16 52955771 52961765 - Dubr lincRNA lincRNA MGP_CBAJ_T0006763.1 MGP_CBAJ_G0005571.1 mouse_genomes_project 16 52956456 52961716 - Dubr lincRNA lincRNA MGP_CBAJ_T0010044.1 MGP_CBAJ_G0008182.1 mouse_genomes_project 16 101727955 101728052 + Mir802 miRNA miRNA MGP_CBAJ_T0043834.1 MGP_CBAJ_G0022466.1 mouse_genomes_project 16 35114657 35263907 + Mylk protein_coding retained_intron MGP_CBAJ_T0043835.1 MGP_CBAJ_G0022466.1 mouse_genomes_project 16 35160356 35388200 + MGP_CBAJ_P0043835 Mylk protein_coding protein_coding MGP_CBAJ_T0010009.1 MGP_CBAJ_G0008147.1 mouse_genomes_project 16 22025576 22025682 + miRNA miRNA MGP_CBAJ_T0043785.1 MGP_CBAJ_G0022457.1 mouse_genomes_project 16 33562602 33712455 + MGP_CBAJ_P0043785 Zfp148 protein_coding protein_coding MGP_CBAJ_T0043786.1 MGP_CBAJ_G0022457.1 mouse_genomes_project 16 33590809 33706860 + MGP_CBAJ_P0043786 Zfp148 protein_coding protein_coding MGP_CBAJ_T0042524.1 MGP_CBAJ_G0022159.1 mouse_genomes_project 16 506569 538376 - MGP_CBAJ_P0042524 Nlrc3 protein_coding protein_coding MGP_CBAJ_T0042525.1 MGP_CBAJ_G0022159.1 mouse_genomes_project 16 507172 538463 - MGP_CBAJ_P0042525 Nlrc3 protein_coding protein_coding MGP_CBAJ_T0042526.1 MGP_CBAJ_G0022159.1 mouse_genomes_project 16 510144 538463 - Nlrc3 protein_coding retained_intron MGP_CBAJ_T0042527.1 MGP_CBAJ_G0022159.1 mouse_genomes_project 16 510153 525727 - Nlrc3 protein_coding retained_intron MGP_CBAJ_T0010022.1 MGP_CBAJ_G0008160.1 mouse_genomes_project 16 45571760 45571886 + Mir3470b miRNA miRNA MGP_CBAJ_T0042941.1 MGP_CBAJ_G0022264.1 mouse_genomes_project 16 14842980 14845727 - MGP_CBAJ_P0042941 Vpreb2 protein_coding protein_coding MGP_CBAJ_T0098961.1 MGP_CBAJ_G0037216.1 mouse_genomes_project 16 40011234 40011333 + Gm22500 snRNA snRNA MGP_CBAJ_T0043535.1 MGP_CBAJ_G0022396.1 mouse_genomes_project 16 25785135 25805604 + MGP_CBAJ_P0043535 Cldn16 protein_coding protein_coding MGP_CBAJ_T0043536.1 MGP_CBAJ_G0022396.1 mouse_genomes_project 16 25785256 25805602 + MGP_CBAJ_P0043536 Cldn16 protein_coding protein_coding MGP_CBAJ_T0097973.1 MGP_CBAJ_G0036246.1 mouse_genomes_project 16 33088354 33088473 + n-R5s33 rRNA rRNA MGP_CBAJ_T0044801.1 MGP_CBAJ_G0022757.1 mouse_genomes_project 16 100615812 100688759 - MGP_CBAJ_P0044801 Rcan1 protein_coding protein_coding MGP_CBAJ_T0044802.1 MGP_CBAJ_G0022757.1 mouse_genomes_project 16 100615812 100623937 - MGP_CBAJ_P0044802 Rcan1 protein_coding protein_coding MGP_CBAJ_T0000935.1 MGP_CBAJ_G0000868.1 mouse_genomes_project 16 83573291 83575615 + TEC TEC MGP_CBAJ_T0101679.1 MGP_CBAJ_G0039710.1 mouse_genomes_project 16 102040464 102042731 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0044747.1 MGP_CBAJ_G0022749.1 mouse_genomes_project 16 99801986 99853367 - MGP_CBAJ_P0044747 Cryzl1 protein_coding protein_coding MGP_CBAJ_T0044748.1 MGP_CBAJ_G0022749.1 mouse_genomes_project 16 99802006 99853194 - MGP_CBAJ_P0044748 Cryzl1 protein_coding protein_coding MGP_CBAJ_T0044749.1 MGP_CBAJ_G0022749.1 mouse_genomes_project 16 99802190 99809881 - Cryzl1 protein_coding processed_transcript MGP_CBAJ_T0044750.1 MGP_CBAJ_G0022749.1 mouse_genomes_project 16 99802270 99853015 - MGP_CBAJ_P0044750 Cryzl1 protein_coding protein_coding MGP_CBAJ_T0044751.1 MGP_CBAJ_G0022749.1 mouse_genomes_project 16 99809049 99833615 - MGP_CBAJ_P0044751 Cryzl1 protein_coding protein_coding MGP_CBAJ_T0044752.1 MGP_CBAJ_G0022749.1 mouse_genomes_project 16 99809075 99841681 - MGP_CBAJ_P0044752 Cryzl1 protein_coding protein_coding MGP_CBAJ_T0044753.1 MGP_CBAJ_G0022749.1 mouse_genomes_project 16 99813618 99853093 - MGP_CBAJ_P0044753 Cryzl1 protein_coding protein_coding MGP_CBAJ_T0044754.1 MGP_CBAJ_G0022749.1 mouse_genomes_project 16 99813871 99820945 - Cryzl1 protein_coding retained_intron MGP_CBAJ_T0044755.1 MGP_CBAJ_G0022749.1 mouse_genomes_project 16 99828691 99852992 - Cryzl1 protein_coding retained_intron MGP_CBAJ_T0044756.1 MGP_CBAJ_G0022749.1 mouse_genomes_project 16 99838768 99852990 - Cryzl1 protein_coding retained_intron MGP_CBAJ_T0044757.1 MGP_CBAJ_G0022749.1 mouse_genomes_project 16 99839446 99853000 - Cryzl1 protein_coding processed_transcript MGP_CBAJ_T0043560.1 MGP_CBAJ_G0022406.1 mouse_genomes_project 16 28817579 28977016 - MGP_CBAJ_P0043560 Atp13a5 protein_coding protein_coding MGP_CBAJ_T0043561.1 MGP_CBAJ_G0022406.1 mouse_genomes_project 16 28817642 28976990 - MGP_CBAJ_P0043561 Atp13a5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043562.1 MGP_CBAJ_G0022406.1 mouse_genomes_project 16 28818188 28976951 - MGP_CBAJ_P0043562 Atp13a5 protein_coding protein_coding MGP_CBAJ_T0043563.1 MGP_CBAJ_G0022406.1 mouse_genomes_project 16 28928683 28976867 - MGP_CBAJ_P0043563 Atp13a5 protein_coding protein_coding MGP_CBAJ_T0043975.1 MGP_CBAJ_G0022504.1 mouse_genomes_project 16 38561909 38569193 - MGP_CBAJ_P0043975 Ndufb4 protein_coding protein_coding MGP_CBAJ_T0043976.1 MGP_CBAJ_G0022504.1 mouse_genomes_project 16 38562340 38564099 - Ndufb4 protein_coding retained_intron MGP_CBAJ_T0044843.1 MGP_CBAJ_G0022767.1 mouse_genomes_project 16 102592821 102643997 + MGP_CBAJ_P0044843 Sim2 protein_coding protein_coding MGP_CBAJ_T0044408.1 MGP_CBAJ_G0022625.1 mouse_genomes_project 16 62482225 62483229 - MGP_CBAJ_P0044408 protein_coding protein_coding MGP_CBAJ_T0043268.1 MGP_CBAJ_G0022331.1 mouse_genomes_project 16 17862790 17865221 - MGP_CBAJ_P0043268 protein_coding protein_coding MGP_CBAJ_T0012950.1 MGP_CBAJ_G0011062.1 mouse_genomes_project 16 5642499 5643040 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0043998.1 MGP_CBAJ_G0022513.1 mouse_genomes_project 16 39372479 39387712 + MGP_CBAJ_P0043998 protein_coding protein_coding MGP_CBAJ_T0098293.1 MGP_CBAJ_G0036561.1 mouse_genomes_project 16 100261839 100263755 + Gm16310 sense_intronic sense_intronic MGP_CBAJ_T0009998.1 MGP_CBAJ_G0008136.1 mouse_genomes_project 16 16313925 16314007 - Mir6366 miRNA miRNA MGP_CBAJ_T0042482.1 MGP_CBAJ_G0022149.1 mouse_genomes_project 16 85767 86780 + MGP_CBAJ_P0042482 Olfr161 protein_coding protein_coding MGP_CBAJ_T0043514.1 MGP_CBAJ_G0022389.1 mouse_genomes_project 16 22971780 22980202 - MGP_CBAJ_P0043514 Rtp2 protein_coding protein_coding MGP_CBAJ_T0043318.1 MGP_CBAJ_G0022345.1 mouse_genomes_project 16 18924696 18935755 + MGP_CBAJ_P0043318 Eif2b5 protein_coding protein_coding MGP_CBAJ_T0043319.1 MGP_CBAJ_G0022345.1 mouse_genomes_project 16 18932216 18935123 + MGP_CBAJ_P0043319 Eif2b5 protein_coding protein_coding MGP_CBAJ_T0017268.1 MGP_CBAJ_G0015068.1 mouse_genomes_project 16 99065732 99077774 + 4931406G06Rik processed_transcript processed_transcript MGP_CBAJ_T0042787.1 MGP_CBAJ_G0022224.1 mouse_genomes_project 16 8565783 8577627 - MGP_CBAJ_P0042787 Rsl1d1 protein_coding protein_coding MGP_CBAJ_T0042788.1 MGP_CBAJ_G0022224.1 mouse_genomes_project 16 8566318 8567809 - Rsl1d1 protein_coding retained_intron MGP_CBAJ_T0042789.1 MGP_CBAJ_G0022224.1 mouse_genomes_project 16 8569259 8577560 - Rsl1d1 protein_coding retained_intron MGP_CBAJ_T0098292.1 MGP_CBAJ_G0036560.1 mouse_genomes_project 16 30778238 30782364 - Gm15742 sense_intronic sense_intronic MGP_CBAJ_T0043530.1 MGP_CBAJ_G0022394.1 mouse_genomes_project 16 25204848 25382986 - MGP_CBAJ_P0043530 P3h2 protein_coding protein_coding MGP_CBAJ_T0043531.1 MGP_CBAJ_G0022394.1 mouse_genomes_project 16 25217836 25235147 - P3h2 protein_coding retained_intron MGP_CBAJ_T0043532.1 MGP_CBAJ_G0022394.1 mouse_genomes_project 16 25235476 25242764 - P3h2 protein_coding processed_transcript MGP_CBAJ_T0043533.1 MGP_CBAJ_G0022394.1 mouse_genomes_project 16 25247133 25267543 - P3h2 protein_coding processed_transcript MGP_CBAJ_T0043503.1 MGP_CBAJ_G0022384.1 mouse_genomes_project 16 22161977 22321531 + MGP_CBAJ_P0043503 St6gal1 protein_coding protein_coding MGP_CBAJ_T0043504.1 MGP_CBAJ_G0022384.1 mouse_genomes_project 16 22163258 22280191 + St6gal1 protein_coding processed_transcript MGP_CBAJ_T0043505.1 MGP_CBAJ_G0022384.1 mouse_genomes_project 16 22163258 22321533 + MGP_CBAJ_P0043505 St6gal1 protein_coding protein_coding MGP_CBAJ_T0043506.1 MGP_CBAJ_G0022384.1 mouse_genomes_project 16 22217953 22280299 + MGP_CBAJ_P0043506 St6gal1 protein_coding protein_coding MGP_CBAJ_T0043507.1 MGP_CBAJ_G0022384.1 mouse_genomes_project 16 22247529 22319778 + MGP_CBAJ_P0043507 St6gal1 protein_coding protein_coding MGP_CBAJ_T0043508.1 MGP_CBAJ_G0022384.1 mouse_genomes_project 16 22319498 22321531 + St6gal1 protein_coding processed_transcript MGP_CBAJ_T0011285.1 MGP_CBAJ_G0009423.1 mouse_genomes_project 16 42586094 42586257 - Gm27587 misc_RNA misc_RNA MGP_CBAJ_T0044396.1 MGP_CBAJ_G0022617.1 mouse_genomes_project 16 62186899 62192132 + MGP_CBAJ_P0044396 Olfr183 protein_coding protein_coding MGP_CBAJ_T0044397.1 MGP_CBAJ_G0022617.1 mouse_genomes_project 16 62186918 62191668 + MGP_CBAJ_P0044397 Olfr183 protein_coding protein_coding MGP_CBAJ_T0044805.1 MGP_CBAJ_G0022759.1 mouse_genomes_project 16 100837762 101092088 - MGP_CBAJ_P0044805 Runx1 protein_coding protein_coding MGP_CBAJ_T0044806.1 MGP_CBAJ_G0022759.1 mouse_genomes_project 16 100839952 100937270 - MGP_CBAJ_P0044806 Runx1 protein_coding protein_coding MGP_CBAJ_T0044807.1 MGP_CBAJ_G0022759.1 mouse_genomes_project 16 100841694 100936067 - MGP_CBAJ_P0044807 Runx1 protein_coding protein_coding MGP_CBAJ_T0044808.1 MGP_CBAJ_G0022759.1 mouse_genomes_project 16 100926898 100935437 - MGP_CBAJ_P0044808 Runx1 protein_coding protein_coding MGP_CBAJ_T0044809.1 MGP_CBAJ_G0022759.1 mouse_genomes_project 16 100926931 100937267 - Runx1 protein_coding retained_intron MGP_CBAJ_T0044810.1 MGP_CBAJ_G0022759.1 mouse_genomes_project 16 100935533 101091717 - MGP_CBAJ_P0044810 Runx1 protein_coding protein_coding MGP_CBAJ_T0044811.1 MGP_CBAJ_G0022759.1 mouse_genomes_project 16 101081366 101092013 - MGP_CBAJ_P0044811 Runx1 protein_coding protein_coding MGP_CBAJ_T0043809.1 MGP_CBAJ_G0022462.1 mouse_genomes_project 16 34245339 34257602 - MGP_CBAJ_P0043809 Umps protein_coding protein_coding MGP_CBAJ_T0043810.1 MGP_CBAJ_G0022462.1 mouse_genomes_project 16 34245351 34257567 - MGP_CBAJ_P0043810 Umps protein_coding nonsense_mediated_decay MGP_CBAJ_T0044620.1 MGP_CBAJ_G0022715.1 mouse_genomes_project 16 96880678 96880837 + MGP_CBAJ_P0044620 Gm7735 protein_coding protein_coding MGP_CBAJ_T0044517.1 MGP_CBAJ_G0022666.1 mouse_genomes_project 16 85165721 85320060 - MGP_CBAJ_P0044517 Tmprss15 protein_coding protein_coding MGP_CBAJ_T0044518.1 MGP_CBAJ_G0022666.1 mouse_genomes_project 16 85166177 85320065 - MGP_CBAJ_P0044518 Tmprss15 protein_coding protein_coding MGP_CBAJ_T0044717.1 MGP_CBAJ_G0022744.1 mouse_genomes_project 16 99716589 99721310 - MGP_CBAJ_P0044717 Dnajc28 protein_coding protein_coding MGP_CBAJ_T0044718.1 MGP_CBAJ_G0022744.1 mouse_genomes_project 16 99718022 99721305 - MGP_CBAJ_P0044718 Dnajc28 protein_coding protein_coding MGP_CBAJ_T0044719.1 MGP_CBAJ_G0022744.1 mouse_genomes_project 16 99719137 99721302 - MGP_CBAJ_P0044719 Dnajc28 protein_coding protein_coding MGP_CBAJ_T0044720.1 MGP_CBAJ_G0022744.1 mouse_genomes_project 16 99719408 99721393 - MGP_CBAJ_P0044720 Dnajc28 protein_coding protein_coding MGP_CBAJ_T0044400.1 MGP_CBAJ_G0022619.1 mouse_genomes_project 16 62226004 62229970 - MGP_CBAJ_P0044400 Olfr187 protein_coding protein_coding MGP_CBAJ_T0044401.1 MGP_CBAJ_G0022619.1 mouse_genomes_project 16 62226004 62226982 - MGP_CBAJ_P0044401 Olfr187 protein_coding protein_coding MGP_CBAJ_T0044402.1 MGP_CBAJ_G0022619.1 mouse_genomes_project 16 62226529 62229988 - MGP_CBAJ_P0044402 Olfr187 protein_coding protein_coding MGP_CBAJ_T0042823.1 MGP_CBAJ_G0022234.1 mouse_genomes_project 16 11307573 11338787 + MGP_CBAJ_P0042823 Bfar protein_coding protein_coding MGP_CBAJ_T0042825.1 MGP_CBAJ_G0022234.1 mouse_genomes_project 16 11307665 11334464 + MGP_CBAJ_P0042825 Bfar protein_coding nonsense_mediated_decay MGP_CBAJ_T0042826.1 MGP_CBAJ_G0022234.1 mouse_genomes_project 16 11307735 11338777 + MGP_CBAJ_P0042826 Bfar protein_coding protein_coding MGP_CBAJ_T0042827.1 MGP_CBAJ_G0022234.1 mouse_genomes_project 16 11307777 11321561 + Bfar protein_coding retained_intron MGP_CBAJ_T0042828.1 MGP_CBAJ_G0022234.1 mouse_genomes_project 16 11320825 11323488 + Bfar protein_coding retained_intron MGP_CBAJ_T0042829.1 MGP_CBAJ_G0022234.1 mouse_genomes_project 16 11321175 11323919 + Bfar protein_coding retained_intron MGP_CBAJ_T0042830.1 MGP_CBAJ_G0022234.1 mouse_genomes_project 16 11327915 11332681 + Bfar protein_coding retained_intron MGP_CBAJ_T0003574.1 MGP_CBAJ_G0003237.1 mouse_genomes_project 16 1717369 1722623 + Gm42477 antisense antisense MGP_CBAJ_T0012996.1 MGP_CBAJ_G0011108.1 mouse_genomes_project 16 39544472 39546204 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0017234.1 MGP_CBAJ_G0015056.1 mouse_genomes_project 16 21364074 21366671 + Gm15651 processed_transcript processed_transcript MGP_CBAJ_T0000941.1 MGP_CBAJ_G0000874.1 mouse_genomes_project 16 85989326 85989926 + TEC TEC MGP_CBAJ_T0101053.1 MGP_CBAJ_G0039276.1 mouse_genomes_project 16 13247976 13248753 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0042867.1 MGP_CBAJ_G0022243.1 mouse_genomes_project 16 11849887 11908297 - MGP_CBAJ_P0042867 Marf1 protein_coding protein_coding MGP_CBAJ_T0013006.1 MGP_CBAJ_G0011118.1 mouse_genomes_project 16 47230463 47231829 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0044199.1 MGP_CBAJ_G0022558.1 mouse_genomes_project 16 47423986 47437362 - MGP_CBAJ_P0044199 Tagln3 protein_coding protein_coding MGP_CBAJ_T0003621.1 MGP_CBAJ_G0003274.1 mouse_genomes_project 16 100512608 100516361 - 1700048M11Rik antisense antisense MGP_CBAJ_T0011288.1 MGP_CBAJ_G0009426.1 mouse_genomes_project 16 70341438 70341751 + Gm22217 misc_RNA misc_RNA MGP_CBAJ_T0006737.1 MGP_CBAJ_G0005551.1 mouse_genomes_project 16 20468621 20480398 + 1300002E11Rik lincRNA lincRNA MGP_CBAJ_T0006738.1 MGP_CBAJ_G0005551.1 mouse_genomes_project 16 20468636 20485470 + 1300002E11Rik lincRNA lincRNA MGP_CBAJ_T0006739.1 MGP_CBAJ_G0005551.1 mouse_genomes_project 16 20468666 20480398 + 1300002E11Rik lincRNA lincRNA MGP_CBAJ_T0043994.1 MGP_CBAJ_G0022512.1 mouse_genomes_project 16 39372430 39378194 + MGP_CBAJ_P0043994 Gm21987 protein_coding protein_coding MGP_CBAJ_T0043995.1 MGP_CBAJ_G0022512.1 mouse_genomes_project 16 39372435 39378172 + Gm21987 protein_coding processed_transcript MGP_CBAJ_T0043996.1 MGP_CBAJ_G0022512.1 mouse_genomes_project 16 39372461 39378175 + MGP_CBAJ_P0043996 Gm21987 protein_coding protein_coding MGP_CBAJ_T0043997.1 MGP_CBAJ_G0022512.1 mouse_genomes_project 16 39372479 39378162 + Gm21987 protein_coding retained_intron MGP_CBAJ_T0043999.1 MGP_CBAJ_G0022512.1 mouse_genomes_project 16 39374680 39378154 + Gm21987 protein_coding retained_intron MGP_CBAJ_T0044000.1 MGP_CBAJ_G0022512.1 mouse_genomes_project 16 39374732 39378176 + Gm21987 protein_coding processed_transcript MGP_CBAJ_T0044612.1 MGP_CBAJ_G0022709.1 mouse_genomes_project 16 96722563 96723163 - MGP_CBAJ_P0044612 Krtap6-5 protein_coding protein_coding MGP_CBAJ_T0042715.1 MGP_CBAJ_G0022206.1 mouse_genomes_project 16 7517829 7549996 - MGP_CBAJ_P0042715 Emp2 protein_coding protein_coding MGP_CBAJ_T0043556.1 MGP_CBAJ_G0022405.1 mouse_genomes_project 16 28795437 28816262 + MGP_CBAJ_P0043556 Hrasls protein_coding protein_coding MGP_CBAJ_T0043557.1 MGP_CBAJ_G0022405.1 mouse_genomes_project 16 28795850 28814113 + MGP_CBAJ_P0043557 Hrasls protein_coding protein_coding MGP_CBAJ_T0043558.1 MGP_CBAJ_G0022405.1 mouse_genomes_project 16 28795872 28813959 + Hrasls protein_coding processed_transcript MGP_CBAJ_T0043559.1 MGP_CBAJ_G0022405.1 mouse_genomes_project 16 28795912 28806068 + MGP_CBAJ_P0043559 Hrasls protein_coding nonsense_mediated_decay MGP_CBAJ_T0098945.1 MGP_CBAJ_G0037200.1 mouse_genomes_project 16 20973655 20973763 + Gm25810 snRNA snRNA MGP_CBAJ_T0043858.1 MGP_CBAJ_G0022475.1 mouse_genomes_project 16 36437887 36450404 - MGP_CBAJ_P0043858 Dtx3l protein_coding protein_coding MGP_CBAJ_T0043859.1 MGP_CBAJ_G0022475.1 mouse_genomes_project 16 36443127 36450404 - MGP_CBAJ_P0043859 Dtx3l protein_coding protein_coding MGP_CBAJ_T0043843.1 MGP_CBAJ_G0022470.1 mouse_genomes_project 16 35838590 35938743 - MGP_CBAJ_P0043843 Pdia5 protein_coding protein_coding MGP_CBAJ_T0044459.1 MGP_CBAJ_G0022648.1 mouse_genomes_project 16 69879822 69909419 - MGP_CBAJ_P0044459 Chmp2b protein_coding protein_coding MGP_CBAJ_T0044344.1 MGP_CBAJ_G0022598.1 mouse_genomes_project 16 60202901 60226718 - MGP_CBAJ_P0044344 Nit2 protein_coding protein_coding MGP_CBAJ_T0098949.1 MGP_CBAJ_G0037204.1 mouse_genomes_project 16 24932533 24932640 - Gm24928 snRNA snRNA MGP_CBAJ_T0043954.1 MGP_CBAJ_G0022500.1 mouse_genomes_project 16 37970973 38280551 - MGP_CBAJ_P0043954 protein_coding protein_coding MGP_CBAJ_T0043955.1 MGP_CBAJ_G0022500.1 mouse_genomes_project 16 37971299 38280551 - MGP_CBAJ_P0043955 protein_coding protein_coding MGP_CBAJ_T0043956.1 MGP_CBAJ_G0022500.1 mouse_genomes_project 16 37971687 38280586 - MGP_CBAJ_P0043956 protein_coding protein_coding MGP_CBAJ_T0043957.1 MGP_CBAJ_G0022500.1 mouse_genomes_project 16 37971687 38280590 - MGP_CBAJ_P0043957 protein_coding protein_coding MGP_CBAJ_T0043958.1 MGP_CBAJ_G0022500.1 mouse_genomes_project 16 37994855 38280551 - MGP_CBAJ_P0043958 protein_coding protein_coding MGP_CBAJ_T0043959.1 MGP_CBAJ_G0022500.1 mouse_genomes_project 16 38018959 38074905 - protein_coding processed_transcript MGP_CBAJ_T0043960.1 MGP_CBAJ_G0022500.1 mouse_genomes_project 16 38086400 38280551 - MGP_CBAJ_P0043960 protein_coding protein_coding MGP_CBAJ_T0043961.1 MGP_CBAJ_G0022500.1 mouse_genomes_project 16 38207550 38280551 - protein_coding retained_intron MGP_CBAJ_T0043962.1 MGP_CBAJ_G0022500.1 mouse_genomes_project 16 38267821 38280586 - protein_coding processed_transcript MGP_CBAJ_T0043963.1 MGP_CBAJ_G0022500.1 mouse_genomes_project 16 38278498 38280551 - protein_coding retained_intron MGP_CBAJ_T0010010.1 MGP_CBAJ_G0008148.1 mouse_genomes_project 16 23960127 23960213 + Mir28a miRNA miRNA MGP_CBAJ_T0043897.1 MGP_CBAJ_G0022491.1 mouse_genomes_project 16 37409910 37475962 - MGP_CBAJ_P0043897 Cd86 protein_coding protein_coding MGP_CBAJ_T0043898.1 MGP_CBAJ_G0022491.1 mouse_genomes_project 16 37409938 37410561 - Cd86 protein_coding processed_transcript MGP_CBAJ_T0043899.1 MGP_CBAJ_G0022491.1 mouse_genomes_project 16 37429989 37452068 - MGP_CBAJ_P0043899 Cd86 protein_coding protein_coding MGP_CBAJ_T0043900.1 MGP_CBAJ_G0022491.1 mouse_genomes_project 16 37470702 37475966 - Cd86 protein_coding processed_transcript MGP_CBAJ_T0044798.1 MGP_CBAJ_G0022755.1 mouse_genomes_project 16 100522655 100525334 - MGP_CBAJ_P0044798 4930563D23Rik protein_coding protein_coding MGP_CBAJ_T0003573.1 MGP_CBAJ_G0003236.1 mouse_genomes_project 16 1389062 1390003 + Gm15859 antisense antisense MGP_CBAJ_T0043892.1 MGP_CBAJ_G0022489.1 mouse_genomes_project 16 37219810 37230946 - MGP_CBAJ_P0043892 Stfa3 protein_coding protein_coding MGP_CBAJ_T0012992.1 MGP_CBAJ_G0011104.1 mouse_genomes_project 16 36426726 36426999 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012952.1 MGP_CBAJ_G0011064.1 mouse_genomes_project 16 7229309 7230075 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101671.1 MGP_CBAJ_G0039702.1 mouse_genomes_project 16 11624495 11626495 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0044239.1 MGP_CBAJ_G0022573.1 mouse_genomes_project 16 50915627 50930659 - Dzip3 protein_coding retained_intron MGP_CBAJ_T0044240.1 MGP_CBAJ_G0022573.1 mouse_genomes_project 16 50915627 50989067 - MGP_CBAJ_P0044240 Dzip3 protein_coding protein_coding MGP_CBAJ_T0044241.1 MGP_CBAJ_G0022573.1 mouse_genomes_project 16 50915629 50930567 - Dzip3 protein_coding retained_intron MGP_CBAJ_T0044242.1 MGP_CBAJ_G0022573.1 mouse_genomes_project 16 50917274 50988843 - MGP_CBAJ_P0044242 Dzip3 protein_coding protein_coding MGP_CBAJ_T0044243.1 MGP_CBAJ_G0022573.1 mouse_genomes_project 16 50918262 50921858 - MGP_CBAJ_P0044243 Dzip3 protein_coding protein_coding MGP_CBAJ_T0044244.1 MGP_CBAJ_G0022573.1 mouse_genomes_project 16 50918482 50923403 - Dzip3 protein_coding retained_intron MGP_CBAJ_T0044245.1 MGP_CBAJ_G0022573.1 mouse_genomes_project 16 50937291 50950269 - Dzip3 protein_coding retained_intron MGP_CBAJ_T0044546.1 MGP_CBAJ_G0022674.1 mouse_genomes_project 16 93032759 93042046 - MGP_CBAJ_P0044546 Adamts1 protein_coding protein_coding MGP_CBAJ_T0044547.1 MGP_CBAJ_G0022674.1 mouse_genomes_project 16 93034408 93040414 - MGP_CBAJ_P0044547 Adamts1 protein_coding protein_coding MGP_CBAJ_T0044548.1 MGP_CBAJ_G0022674.1 mouse_genomes_project 16 93037163 93038571 - Adamts1 protein_coding processed_transcript MGP_CBAJ_T0044508.1 MGP_CBAJ_G0022662.1 mouse_genomes_project 16 84428827 84473413 + MGP_CBAJ_P0044508 Cxadr protein_coding protein_coding MGP_CBAJ_T0044509.1 MGP_CBAJ_G0022662.1 mouse_genomes_project 16 84431515 84485339 + MGP_CBAJ_P0044509 Cxadr protein_coding protein_coding MGP_CBAJ_T0100226.1 MGP_CBAJ_G0038481.1 mouse_genomes_project 16 73240732 73240839 - Gm24681 snoRNA snoRNA MGP_CBAJ_T0042660.1 MGP_CBAJ_G0022192.1 mouse_genomes_project 16 1965754 1977278 - MGP_CBAJ_P0042660 Eef2kmt protein_coding protein_coding MGP_CBAJ_T0042661.1 MGP_CBAJ_G0022192.1 mouse_genomes_project 16 1966481 1977236 - Eef2kmt protein_coding retained_intron MGP_CBAJ_T0042662.1 MGP_CBAJ_G0022192.1 mouse_genomes_project 16 1968667 1977251 - MGP_CBAJ_P0042662 Eef2kmt protein_coding protein_coding MGP_CBAJ_T0042663.1 MGP_CBAJ_G0022192.1 mouse_genomes_project 16 1968679 1970163 - Eef2kmt protein_coding retained_intron MGP_CBAJ_T0042664.1 MGP_CBAJ_G0022192.1 mouse_genomes_project 16 1970367 1977224 - Eef2kmt protein_coding retained_intron MGP_CBAJ_T0042564.1 MGP_CBAJ_G0022166.1 mouse_genomes_project 16 1109502 1152336 - MGP_CBAJ_P0042564 Srl protein_coding protein_coding MGP_CBAJ_T0042565.1 MGP_CBAJ_G0022166.1 mouse_genomes_project 16 1109514 1152336 - MGP_CBAJ_P0042565 Srl protein_coding protein_coding MGP_CBAJ_T0042566.1 MGP_CBAJ_G0022166.1 mouse_genomes_project 16 1116829 1174114 - Srl protein_coding processed_transcript MGP_CBAJ_T0042567.1 MGP_CBAJ_G0022166.1 mouse_genomes_project 16 1122836 1152324 - Srl protein_coding retained_intron MGP_CBAJ_T0043703.1 MGP_CBAJ_G0022442.1 mouse_genomes_project 16 32451961 32463935 - MGP_CBAJ_P0043703 Slc51a protein_coding protein_coding MGP_CBAJ_T0043419.1 MGP_CBAJ_G0022362.1 mouse_genomes_project 16 20062032 20303724 + MGP_CBAJ_P0043419 Vps8 protein_coding protein_coding MGP_CBAJ_T0043420.1 MGP_CBAJ_G0022362.1 mouse_genomes_project 16 20062032 20303724 + MGP_CBAJ_P0043420 Vps8 protein_coding protein_coding MGP_CBAJ_T0043421.1 MGP_CBAJ_G0022362.1 mouse_genomes_project 16 20062032 20232819 + MGP_CBAJ_P0043421 Vps8 protein_coding protein_coding MGP_CBAJ_T0043422.1 MGP_CBAJ_G0022362.1 mouse_genomes_project 16 20062083 20303724 + MGP_CBAJ_P0043422 Vps8 protein_coding protein_coding MGP_CBAJ_T0043423.1 MGP_CBAJ_G0022362.1 mouse_genomes_project 16 20062110 20188496 + MGP_CBAJ_P0043423 Vps8 protein_coding protein_coding MGP_CBAJ_T0043424.1 MGP_CBAJ_G0022362.1 mouse_genomes_project 16 20062115 20303716 + MGP_CBAJ_P0043424 Vps8 protein_coding protein_coding MGP_CBAJ_T0043425.1 MGP_CBAJ_G0022362.1 mouse_genomes_project 16 20062186 20073888 + MGP_CBAJ_P0043425 Vps8 protein_coding protein_coding MGP_CBAJ_T0043426.1 MGP_CBAJ_G0022362.1 mouse_genomes_project 16 20109735 20300616 + MGP_CBAJ_P0043426 Vps8 protein_coding protein_coding MGP_CBAJ_T0043427.1 MGP_CBAJ_G0022362.1 mouse_genomes_project 16 20150719 20303719 + MGP_CBAJ_P0043427 Vps8 protein_coding protein_coding MGP_CBAJ_T0043428.1 MGP_CBAJ_G0022362.1 mouse_genomes_project 16 20169552 20175252 + Vps8 protein_coding retained_intron MGP_CBAJ_T0043429.1 MGP_CBAJ_G0022362.1 mouse_genomes_project 16 20169622 20205279 + MGP_CBAJ_P0043429 Vps8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043430.1 MGP_CBAJ_G0022362.1 mouse_genomes_project 16 20215800 20237901 + Vps8 protein_coding retained_intron MGP_CBAJ_T0043431.1 MGP_CBAJ_G0022362.1 mouse_genomes_project 16 20283328 20303460 + Vps8 protein_coding processed_transcript MGP_CBAJ_T0044614.1 MGP_CBAJ_G0022711.1 mouse_genomes_project 16 96769807 96770327 + MGP_CBAJ_P0044614 Krtap6-3 protein_coding protein_coding MGP_CBAJ_T0044615.1 MGP_CBAJ_G0022711.1 mouse_genomes_project 16 96769883 96770327 + MGP_CBAJ_P0044615 Krtap6-3 protein_coding protein_coding MGP_CBAJ_T0098967.1 MGP_CBAJ_G0037222.1 mouse_genomes_project 16 57764317 57764424 + Gm22977 snRNA snRNA MGP_CBAJ_T0042751.1 MGP_CBAJ_G0022218.1 mouse_genomes_project 16 8139406 8139484 + MGP_CBAJ_P0042751 Gm11172 protein_coding protein_coding MGP_CBAJ_T0043456.1 MGP_CBAJ_G0022372.1 mouse_genomes_project 16 21274682 21478120 - MGP_CBAJ_P0043456 Dgkg protein_coding protein_coding MGP_CBAJ_T0043457.1 MGP_CBAJ_G0022372.1 mouse_genomes_project 16 21275443 21478168 - MGP_CBAJ_P0043457 Dgkg protein_coding protein_coding MGP_CBAJ_T0043458.1 MGP_CBAJ_G0022372.1 mouse_genomes_project 16 21364007 21478135 - MGP_CBAJ_P0043458 Dgkg protein_coding nonsense_mediated_decay MGP_CBAJ_T0043459.1 MGP_CBAJ_G0022372.1 mouse_genomes_project 16 21414699 21477975 - Dgkg protein_coding processed_transcript MGP_CBAJ_T0043606.1 MGP_CBAJ_G0022416.1 mouse_genomes_project 16 30323191 30350261 - MGP_CBAJ_P0043606 Lsg1 protein_coding protein_coding MGP_CBAJ_T0043607.1 MGP_CBAJ_G0022416.1 mouse_genomes_project 16 30324068 30350258 - MGP_CBAJ_P0043607 Lsg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043608.1 MGP_CBAJ_G0022416.1 mouse_genomes_project 16 30327375 30350232 - Lsg1 protein_coding retained_intron MGP_CBAJ_T0043609.1 MGP_CBAJ_G0022416.1 mouse_genomes_project 16 30327727 30330800 - Lsg1 protein_coding retained_intron MGP_CBAJ_T0043610.1 MGP_CBAJ_G0022416.1 mouse_genomes_project 16 30330703 30350261 - Lsg1 protein_coding retained_intron MGP_CBAJ_T0043611.1 MGP_CBAJ_G0022416.1 mouse_genomes_project 16 30334001 30348319 - MGP_CBAJ_P0043611 Lsg1 protein_coding protein_coding MGP_CBAJ_T0043612.1 MGP_CBAJ_G0022416.1 mouse_genomes_project 16 30335948 30350243 - Lsg1 protein_coding retained_intron MGP_CBAJ_T0043613.1 MGP_CBAJ_G0022416.1 mouse_genomes_project 16 30344922 30350208 - Lsg1 protein_coding retained_intron MGP_CBAJ_T0043122.1 MGP_CBAJ_G0022296.1 mouse_genomes_project 16 15933728 15994174 - protein_coding retained_intron MGP_CBAJ_T0043123.1 MGP_CBAJ_G0022296.1 mouse_genomes_project 16 15934601 15994180 - MGP_CBAJ_P0043123 protein_coding protein_coding MGP_CBAJ_T0043124.1 MGP_CBAJ_G0022296.1 mouse_genomes_project 16 15934601 15994213 - MGP_CBAJ_P0043124 protein_coding protein_coding MGP_CBAJ_T0043125.1 MGP_CBAJ_G0022296.1 mouse_genomes_project 16 15934607 15994177 - MGP_CBAJ_P0043125 protein_coding protein_coding MGP_CBAJ_T0043126.1 MGP_CBAJ_G0022296.1 mouse_genomes_project 16 15935556 15994113 - MGP_CBAJ_P0043126 protein_coding protein_coding MGP_CBAJ_T0043127.1 MGP_CBAJ_G0022296.1 mouse_genomes_project 16 15943557 15994169 - protein_coding retained_intron MGP_CBAJ_T0043128.1 MGP_CBAJ_G0022296.1 mouse_genomes_project 16 15960203 15996619 - protein_coding processed_transcript MGP_CBAJ_T0043129.1 MGP_CBAJ_G0022296.1 mouse_genomes_project 16 15995094 15996665 - protein_coding processed_transcript MGP_CBAJ_T0009999.1 MGP_CBAJ_G0008137.1 mouse_genomes_project 16 16465465 16465544 - Mir1306 miRNA miRNA MGP_CBAJ_T0100193.1 MGP_CBAJ_G0038448.1 mouse_genomes_project 16 11144028 11144152 - Gm25276 snoRNA snoRNA MGP_CBAJ_T0044618.1 MGP_CBAJ_G0022713.1 mouse_genomes_project 16 96855294 96855759 + MGP_CBAJ_P0044618 Gm10061 protein_coding protein_coding MGP_CBAJ_T0042668.1 MGP_CBAJ_G0022194.1 mouse_genomes_project 16 5402586 5425060 - MGP_CBAJ_P0042668 Tmem114 protein_coding protein_coding MGP_CBAJ_T0042605.1 MGP_CBAJ_G0022175.1 mouse_genomes_project 16 1403802 1426105 - MGP_CBAJ_P0042605 Cdip1 protein_coding protein_coding MGP_CBAJ_T0042608.1 MGP_CBAJ_G0022175.1 mouse_genomes_project 16 1421468 1446047 - MGP_CBAJ_P0042608 Cdip1 protein_coding protein_coding MGP_CBAJ_T0042609.1 MGP_CBAJ_G0022175.1 mouse_genomes_project 16 1422848 1427520 - Cdip1 protein_coding retained_intron MGP_CBAJ_T0042610.1 MGP_CBAJ_G0022175.1 mouse_genomes_project 16 1422848 1446349 - MGP_CBAJ_P0042610 Cdip1 protein_coding protein_coding MGP_CBAJ_T0042611.1 MGP_CBAJ_G0022175.1 mouse_genomes_project 16 1423346 1445987 - MGP_CBAJ_P0042611 Cdip1 protein_coding protein_coding MGP_CBAJ_T0042612.1 MGP_CBAJ_G0022175.1 mouse_genomes_project 16 1425316 1446323 - Cdip1 protein_coding retained_intron MGP_CBAJ_T0006743.1 MGP_CBAJ_G0005555.1 mouse_genomes_project 16 24209615 24219030 + A230028O05Rik lincRNA lincRNA MGP_CBAJ_T0044462.1 MGP_CBAJ_G0022650.1 mouse_genomes_project 16 71113029 72208772 - MGP_CBAJ_P0044462 Cadm2 protein_coding protein_coding MGP_CBAJ_T0044463.1 MGP_CBAJ_G0022650.1 mouse_genomes_project 16 71119354 72208687 - MGP_CBAJ_P0044463 Cadm2 protein_coding protein_coding MGP_CBAJ_T0044464.1 MGP_CBAJ_G0022650.1 mouse_genomes_project 16 71119799 72208772 - MGP_CBAJ_P0044464 Cadm2 protein_coding protein_coding MGP_CBAJ_T0044465.1 MGP_CBAJ_G0022650.1 mouse_genomes_project 16 71120702 71455330 - MGP_CBAJ_P0044465 Cadm2 protein_coding protein_coding MGP_CBAJ_T0044466.1 MGP_CBAJ_G0022650.1 mouse_genomes_project 16 71255664 72208357 - MGP_CBAJ_P0044466 Cadm2 protein_coding protein_coding MGP_CBAJ_T0044467.1 MGP_CBAJ_G0022650.1 mouse_genomes_project 16 71281312 71420375 - Cadm2 protein_coding processed_transcript MGP_CBAJ_T0043893.1 MGP_CBAJ_G0022490.1 mouse_genomes_project 16 37281392 37359338 - MGP_CBAJ_P0043893 Casr protein_coding protein_coding MGP_CBAJ_T0043894.1 MGP_CBAJ_G0022490.1 mouse_genomes_project 16 37281392 37359338 - MGP_CBAJ_P0043894 Casr protein_coding protein_coding MGP_CBAJ_T0043895.1 MGP_CBAJ_G0022490.1 mouse_genomes_project 16 37282163 37358810 - MGP_CBAJ_P0043895 Casr protein_coding protein_coding MGP_CBAJ_T0043896.1 MGP_CBAJ_G0022490.1 mouse_genomes_project 16 37308242 37359345 - Casr protein_coding processed_transcript MGP_CBAJ_T0012997.1 MGP_CBAJ_G0011109.1 mouse_genomes_project 16 39746770 39747325 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0043500.1 MGP_CBAJ_G0022382.1 mouse_genomes_project 16 22072445 22084934 + MGP_CBAJ_P0043500 Adipoq protein_coding protein_coding MGP_CBAJ_T0043501.1 MGP_CBAJ_G0022382.1 mouse_genomes_project 16 22072555 22084198 + MGP_CBAJ_P0043501 Adipoq protein_coding protein_coding MGP_CBAJ_T0012972.1 MGP_CBAJ_G0011084.1 mouse_genomes_project 16 17312332 17312755 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012970.1 MGP_CBAJ_G0011082.1 mouse_genomes_project 16 17207316 17207724 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098975.1 MGP_CBAJ_G0037230.1 mouse_genomes_project 16 87171034 87171133 + Gm24773 snRNA snRNA MGP_CBAJ_T0042704.1 MGP_CBAJ_G0022202.1 mouse_genomes_project 16 5882832 5917344 + MGP_CBAJ_P0042704 1810013L24Rik protein_coding protein_coding MGP_CBAJ_T0010002.1 MGP_CBAJ_G0008140.1 mouse_genomes_project 16 16565484 16565555 - Gm26219 miRNA miRNA MGP_CBAJ_T0006735.1 MGP_CBAJ_G0005549.1 mouse_genomes_project 16 17530341 17555499 - Gm43388 lincRNA lincRNA MGP_CBAJ_T0010023.1 MGP_CBAJ_G0008161.1 mouse_genomes_project 16 46178325 46178409 - Mir3081 miRNA miRNA MGP_CBAJ_T0012993.1 MGP_CBAJ_G0011105.1 mouse_genomes_project 16 37600668 37603001 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0043854.1 MGP_CBAJ_G0022473.1 mouse_genomes_project 16 36252706 36310625 + MGP_CBAJ_P0043854 Hspbap1 protein_coding protein_coding MGP_CBAJ_T0044386.1 MGP_CBAJ_G0022613.1 mouse_genomes_project 16 62055522 62057279 - MGP_CBAJ_P0044386 Olfr177 protein_coding protein_coding MGP_CBAJ_T0044387.1 MGP_CBAJ_G0022613.1 mouse_genomes_project 16 62055522 62056452 - MGP_CBAJ_P0044387 Olfr177 protein_coding protein_coding MGP_CBAJ_T0044157.1 MGP_CBAJ_G0022548.1 mouse_genomes_project 16 46769467 46770244 + Ccdc80 protein_coding processed_transcript MGP_CBAJ_T0044158.1 MGP_CBAJ_G0022548.1 mouse_genomes_project 16 46769519 46770953 + Ccdc80 protein_coding processed_transcript MGP_CBAJ_T0044159.1 MGP_CBAJ_G0022548.1 mouse_genomes_project 16 46769655 46770409 + Ccdc80 protein_coding processed_transcript MGP_CBAJ_T0044160.1 MGP_CBAJ_G0022548.1 mouse_genomes_project 16 46769677 46805977 + MGP_CBAJ_P0044160 Ccdc80 protein_coding protein_coding MGP_CBAJ_T0044161.1 MGP_CBAJ_G0022548.1 mouse_genomes_project 16 46769740 46771219 + Ccdc80 protein_coding processed_transcript MGP_CBAJ_T0044162.1 MGP_CBAJ_G0022548.1 mouse_genomes_project 16 46770101 46806235 + MGP_CBAJ_P0044162 Ccdc80 protein_coding protein_coding MGP_CBAJ_T0043592.1 MGP_CBAJ_G0022414.1 mouse_genomes_project 16 30023018 30111557 - MGP_CBAJ_P0043592 Atp13a3 protein_coding protein_coding MGP_CBAJ_T0043593.1 MGP_CBAJ_G0022414.1 mouse_genomes_project 16 30023018 30111557 - MGP_CBAJ_P0043593 Atp13a3 protein_coding protein_coding MGP_CBAJ_T0043594.1 MGP_CBAJ_G0022414.1 mouse_genomes_project 16 30071256 30074331 - Atp13a3 protein_coding retained_intron MGP_CBAJ_T0043595.1 MGP_CBAJ_G0022414.1 mouse_genomes_project 16 30078738 30111512 - Atp13a3 protein_coding retained_intron MGP_CBAJ_T0043596.1 MGP_CBAJ_G0022414.1 mouse_genomes_project 16 30108918 30111864 - Atp13a3 protein_coding retained_intron MGP_CBAJ_T0010037.1 MGP_CBAJ_G0008175.1 mouse_genomes_project 16 83701709 83701780 + Mir125b-2 miRNA miRNA MGP_CBAJ_T0098942.1 MGP_CBAJ_G0037197.1 mouse_genomes_project 16 16552030 16552178 + Gm26170 snRNA snRNA MGP_CBAJ_T0043554.1 MGP_CBAJ_G0022403.1 mouse_genomes_project 16 27637123 27943561 - MGP_CBAJ_P0043554 Fgf12 protein_coding protein_coding MGP_CBAJ_T0000934.1 MGP_CBAJ_G0000867.1 mouse_genomes_project 16 83515998 83516521 + TEC TEC MGP_CBAJ_T0044624.1 MGP_CBAJ_G0022719.1 mouse_genomes_project 16 97171737 97175944 - MGP_CBAJ_P0044624 Krtap6-2 protein_coding protein_coding MGP_CBAJ_T0043692.1 MGP_CBAJ_G0022437.1 mouse_genomes_project 16 32219733 32238987 + MGP_CBAJ_P0043692 Rnf168 protein_coding protein_coding MGP_CBAJ_T0043693.1 MGP_CBAJ_G0022437.1 mouse_genomes_project 16 32219735 32248209 + MGP_CBAJ_P0043693 Rnf168 protein_coding protein_coding MGP_CBAJ_T0043694.1 MGP_CBAJ_G0022437.1 mouse_genomes_project 16 32219735 32248737 + MGP_CBAJ_P0043694 Rnf168 protein_coding protein_coding MGP_CBAJ_T0044604.1 MGP_CBAJ_G0022701.1 mouse_genomes_project 16 96567986 96568469 - MGP_CBAJ_P0044604 Krtap19-5 protein_coding protein_coding MGP_CBAJ_T0044193.1 MGP_CBAJ_G0022556.1 mouse_genomes_project 16 47336594 47365627 - MGP_CBAJ_P0044193 BC016579 protein_coding protein_coding MGP_CBAJ_T0042938.1 MGP_CBAJ_G0022263.1 mouse_genomes_project 16 14835270 14838585 - MGP_CBAJ_P0042938 Igll1 protein_coding protein_coding MGP_CBAJ_T0042939.1 MGP_CBAJ_G0022263.1 mouse_genomes_project 16 14835270 14838417 - MGP_CBAJ_P0042939 Igll1 protein_coding protein_coding MGP_CBAJ_T0042940.1 MGP_CBAJ_G0022263.1 mouse_genomes_project 16 14835273 14838585 - Igll1 protein_coding retained_intron MGP_CBAJ_T0098934.1 MGP_CBAJ_G0037189.1 mouse_genomes_project 16 5799968 5800076 - Gm25805 snRNA snRNA MGP_CBAJ_T0044543.1 MGP_CBAJ_G0022672.1 mouse_genomes_project 16 92094149 92353190 - MGP_CBAJ_P0044543 App protein_coding protein_coding MGP_CBAJ_T0000940.1 MGP_CBAJ_G0000873.1 mouse_genomes_project 16 83740465 83742598 + TEC TEC MGP_CBAJ_T0100210.1 MGP_CBAJ_G0038465.1 mouse_genomes_project 16 39150041 39150173 + Gm25617 snoRNA snoRNA MGP_CBAJ_T0013015.1 MGP_CBAJ_G0011127.1 mouse_genomes_project 16 64724241 64724500 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003570.1 MGP_CBAJ_G0003234.1 mouse_genomes_project 16 477712 479309 - Gm15537 antisense antisense MGP_CBAJ_T0012953.1 MGP_CBAJ_G0011065.1 mouse_genomes_project 16 7230103 7230310 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0043156.1 MGP_CBAJ_G0022306.1 mouse_genomes_project 16 16381328 16398504 - MGP_CBAJ_P0043156 Zdhhc8 protein_coding protein_coding MGP_CBAJ_T0043662.1 MGP_CBAJ_G0022429.1 mouse_genomes_project 16 31938259 32013305 - MGP_CBAJ_P0043662 Pak2 protein_coding protein_coding MGP_CBAJ_T0044448.1 MGP_CBAJ_G0022642.1 mouse_genomes_project 16 68590247 68591583 - MGP_CBAJ_P0044448 Csnka2ip protein_coding protein_coding MGP_CBAJ_T0044796.1 MGP_CBAJ_G0022754.1 mouse_genomes_project 16 100505169 100516934 + MGP_CBAJ_P0044796 Smim11 protein_coding protein_coding MGP_CBAJ_T0044797.1 MGP_CBAJ_G0022754.1 mouse_genomes_project 16 100505179 100515317 + MGP_CBAJ_P0044797 Smim11 protein_coding protein_coding MGP_CBAJ_T0012954.1 MGP_CBAJ_G0011066.1 mouse_genomes_project 16 8399195 8399698 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0043804.1 MGP_CBAJ_G0022461.1 mouse_genomes_project 16 34091440 34239717 + MGP_CBAJ_P0043804 Itgb5 protein_coding protein_coding MGP_CBAJ_T0043805.1 MGP_CBAJ_G0022461.1 mouse_genomes_project 16 34091452 34239724 + MGP_CBAJ_P0043805 Itgb5 protein_coding protein_coding MGP_CBAJ_T0043806.1 MGP_CBAJ_G0022461.1 mouse_genomes_project 16 34164293 34198303 + Itgb5 protein_coding processed_transcript MGP_CBAJ_T0043807.1 MGP_CBAJ_G0022461.1 mouse_genomes_project 16 34174265 34184261 + Itgb5 protein_coding processed_transcript MGP_CBAJ_T0043808.1 MGP_CBAJ_G0022461.1 mouse_genomes_project 16 34211039 34234719 + Itgb5 protein_coding processed_transcript MGP_CBAJ_T0043548.1 MGP_CBAJ_G0022401.1 mouse_genomes_project 16 26777149 26803491 - MGP_CBAJ_P0043548 Uts2b protein_coding protein_coding MGP_CBAJ_T0010034.1 MGP_CBAJ_G0008172.1 mouse_genomes_project 16 81562102 81562212 + Gm22923 miRNA miRNA MGP_CBAJ_T0042731.1 MGP_CBAJ_G0022211.1 mouse_genomes_project 16 7785071 7829022 - MGP_CBAJ_P0042731 Dexi protein_coding protein_coding MGP_CBAJ_T0042732.1 MGP_CBAJ_G0022211.1 mouse_genomes_project 16 7816227 7817829 - Dexi protein_coding processed_transcript MGP_CBAJ_T0042733.1 MGP_CBAJ_G0022211.1 mouse_genomes_project 16 7816227 7829022 - MGP_CBAJ_P0042733 Dexi protein_coding protein_coding MGP_CBAJ_T0042602.1 MGP_CBAJ_G0022174.1 mouse_genomes_project 16 1385554 1420856 + MGP_CBAJ_P0042602 Hmox2 protein_coding protein_coding MGP_CBAJ_T0042603.1 MGP_CBAJ_G0022174.1 mouse_genomes_project 16 1385556 1422750 + MGP_CBAJ_P0042603 Hmox2 protein_coding protein_coding MGP_CBAJ_T0042604.1 MGP_CBAJ_G0022174.1 mouse_genomes_project 16 1401893 1422257 + MGP_CBAJ_P0042604 Hmox2 protein_coding protein_coding MGP_CBAJ_T0042606.1 MGP_CBAJ_G0022174.1 mouse_genomes_project 16 1413025 1421098 + MGP_CBAJ_P0042606 Hmox2 protein_coding protein_coding MGP_CBAJ_T0042607.1 MGP_CBAJ_G0022174.1 mouse_genomes_project 16 1413025 1422253 + MGP_CBAJ_P0042607 Hmox2 protein_coding protein_coding MGP_CBAJ_T0100233.1 MGP_CBAJ_G0038488.1 mouse_genomes_project 16 86538086 86538202 + Gm23083 snoRNA snoRNA MGP_CBAJ_T0044384.1 MGP_CBAJ_G0022611.1 mouse_genomes_project 16 61986207 61989263 - MGP_CBAJ_P0044384 protein_coding protein_coding MGP_CBAJ_T0043555.1 MGP_CBAJ_G0022404.1 mouse_genomes_project 16 28369964 28480032 - MGP_CBAJ_P0043555 Mb21d2 protein_coding protein_coding MGP_CBAJ_T0101674.1 MGP_CBAJ_G0039705.1 mouse_genomes_project 16 36700217 36704508 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0044689.1 MGP_CBAJ_G0022734.1 mouse_genomes_project 16 99075006 99090402 - MGP_CBAJ_P0044689 4932438H23Rik protein_coding protein_coding MGP_CBAJ_T0044690.1 MGP_CBAJ_G0022734.1 mouse_genomes_project 16 99075006 99090402 - MGP_CBAJ_P0044690 4932438H23Rik protein_coding protein_coding MGP_CBAJ_T0044691.1 MGP_CBAJ_G0022734.1 mouse_genomes_project 16 99076934 99123138 - MGP_CBAJ_P0044691 4932438H23Rik protein_coding protein_coding MGP_CBAJ_T0044377.1 MGP_CBAJ_G0022609.1 mouse_genomes_project 16 61892456 61893746 - MGP_CBAJ_P0044377 Gpr15 protein_coding protein_coding MGP_CBAJ_T0043623.1 MGP_CBAJ_G0022421.1 mouse_genomes_project 16 31142521 31161698 - MGP_CBAJ_P0043623 Apod protein_coding protein_coding MGP_CBAJ_T0043624.1 MGP_CBAJ_G0022421.1 mouse_genomes_project 16 31143400 31161694 - MGP_CBAJ_P0043624 Apod protein_coding protein_coding MGP_CBAJ_T0043625.1 MGP_CBAJ_G0022421.1 mouse_genomes_project 16 31143434 31161484 - Apod protein_coding retained_intron MGP_CBAJ_T0043626.1 MGP_CBAJ_G0022421.1 mouse_genomes_project 16 31143698 31150335 - Apod protein_coding retained_intron MGP_CBAJ_T0043627.1 MGP_CBAJ_G0022421.1 mouse_genomes_project 16 31143791 31150568 - Apod protein_coding retained_intron MGP_CBAJ_T0043628.1 MGP_CBAJ_G0022421.1 mouse_genomes_project 16 31150394 31158238 - Apod protein_coding retained_intron MGP_CBAJ_T0100237.1 MGP_CBAJ_G0038492.1 mouse_genomes_project 16 94902753 94902889 - Gm25896 snoRNA snoRNA MGP_CBAJ_T0097974.1 MGP_CBAJ_G0036247.1 mouse_genomes_project 16 38809607 38809723 + n-R5s34 rRNA rRNA MGP_CBAJ_T0013029.1 MGP_CBAJ_G0011141.1 mouse_genomes_project 16 99626535 99627937 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000018.1 MGP_CBAJ_G0000013.1 mouse_genomes_project 16 17512676 17512990 - MGP_CBAJ_P0000018 Iglc4 IG_C_gene IG_C_gene MGP_CBAJ_T0042836.1 MGP_CBAJ_G0022238.1 mouse_genomes_project 16 11514877 11532360 + Ntan1 protein_coding processed_transcript MGP_CBAJ_T0042837.1 MGP_CBAJ_G0022238.1 mouse_genomes_project 16 11514899 11532477 + Ntan1 protein_coding processed_transcript MGP_CBAJ_T0042838.1 MGP_CBAJ_G0022238.1 mouse_genomes_project 16 11514906 11535366 + Ntan1 protein_coding processed_transcript MGP_CBAJ_T0042839.1 MGP_CBAJ_G0022238.1 mouse_genomes_project 16 11514944 11525269 + Ntan1 protein_coding retained_intron MGP_CBAJ_T0042840.1 MGP_CBAJ_G0022238.1 mouse_genomes_project 16 11514956 11535369 + MGP_CBAJ_P0042840 Ntan1 protein_coding protein_coding MGP_CBAJ_T0042841.1 MGP_CBAJ_G0022238.1 mouse_genomes_project 16 11531532 11532624 + Ntan1 protein_coding retained_intron MGP_CBAJ_T0042844.1 MGP_CBAJ_G0022238.1 mouse_genomes_project 16 11534001 11535084 + Ntan1 protein_coding retained_intron MGP_CBAJ_T0044143.1 MGP_CBAJ_G0022545.1 mouse_genomes_project 16 46475513 46513593 + MGP_CBAJ_P0044143 Cd200r4 protein_coding protein_coding MGP_CBAJ_T0044144.1 MGP_CBAJ_G0022545.1 mouse_genomes_project 16 46475536 46513592 + MGP_CBAJ_P0044144 Cd200r4 protein_coding protein_coding MGP_CBAJ_T0044145.1 MGP_CBAJ_G0022545.1 mouse_genomes_project 16 46486837 46513609 + MGP_CBAJ_P0044145 Cd200r4 protein_coding protein_coding MGP_CBAJ_T0012949.1 MGP_CBAJ_G0011061.1 mouse_genomes_project 16 1171661 1172049 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098936.1 MGP_CBAJ_G0037191.1 mouse_genomes_project 16 8353478 8353662 + Gm24961 snRNA snRNA MGP_CBAJ_T0097783.1 MGP_CBAJ_G0036056.1 mouse_genomes_project 16 96421183 96421813 + pseudogene pseudogene MGP_CBAJ_T0006786.1 MGP_CBAJ_G0005586.1 mouse_genomes_project 16 104549270 104618589 - 1600002D24Rik lincRNA lincRNA MGP_CBAJ_T0006787.1 MGP_CBAJ_G0005586.1 mouse_genomes_project 16 104560037 104649047 - 1600002D24Rik lincRNA lincRNA MGP_CBAJ_T0098944.1 MGP_CBAJ_G0037199.1 mouse_genomes_project 16 20444940 20445046 + Gm24898 snRNA snRNA MGP_CBAJ_T0044613.1 MGP_CBAJ_G0022710.1 mouse_genomes_project 16 96744812 96745403 - MGP_CBAJ_P0044613 1110025L11Rik protein_coding protein_coding MGP_CBAJ_T0043447.1 MGP_CBAJ_G0022370.1 mouse_genomes_project 16 21000385 21026618 - MGP_CBAJ_P0043447 Tra2b protein_coding protein_coding MGP_CBAJ_T0043448.1 MGP_CBAJ_G0022370.1 mouse_genomes_project 16 21005701 21011453 - Tra2b protein_coding retained_intron MGP_CBAJ_T0043449.1 MGP_CBAJ_G0022370.1 mouse_genomes_project 16 21005978 21026389 - MGP_CBAJ_P0043449 Tra2b protein_coding unknown_likely_coding MGP_CBAJ_T0043450.1 MGP_CBAJ_G0022370.1 mouse_genomes_project 16 21015155 21020254 - Tra2b protein_coding processed_transcript MGP_CBAJ_T0043451.1 MGP_CBAJ_G0022370.1 mouse_genomes_project 16 21018695 21026531 - Tra2b protein_coding retained_intron MGP_CBAJ_T0044104.1 MGP_CBAJ_G0022537.1 mouse_genomes_project 16 45745202 45809151 + MGP_CBAJ_P0044104 Usf3 protein_coding protein_coding MGP_CBAJ_T0044105.1 MGP_CBAJ_G0022537.1 mouse_genomes_project 16 45748129 45797154 + Usf3 protein_coding retained_intron MGP_CBAJ_T0044106.1 MGP_CBAJ_G0022537.1 mouse_genomes_project 16 45748129 45794621 + MGP_CBAJ_P0044106 Usf3 protein_coding protein_coding MGP_CBAJ_T0044107.1 MGP_CBAJ_G0022537.1 mouse_genomes_project 16 45748129 45809149 + MGP_CBAJ_P0044107 Usf3 protein_coding protein_coding MGP_CBAJ_T0044450.1 MGP_CBAJ_G0022644.1 mouse_genomes_project 16 68971024 69048302 - MGP_CBAJ_P0044450 protein_coding protein_coding MGP_CBAJ_T0000041.1 MGP_CBAJ_G0000033.1 mouse_genomes_project 16 17517875 17517913 - MGP_CBAJ_P0000041 Iglj2 IG_J_gene IG_J_gene MGP_CBAJ_T0100229.1 MGP_CBAJ_G0038484.1 mouse_genomes_project 16 80232140 80232286 + Gm26307 snoRNA snoRNA MGP_CBAJ_T0044603.1 MGP_CBAJ_G0022700.1 mouse_genomes_project 16 96556862 96557166 - MGP_CBAJ_P0044603 Krtap19-4 protein_coding protein_coding MGP_CBAJ_T0098957.1 MGP_CBAJ_G0037212.1 mouse_genomes_project 16 37160607 37160714 + Gm22349 snRNA snRNA MGP_CBAJ_T0043837.1 MGP_CBAJ_G0022468.1 mouse_genomes_project 16 35569876 35744064 + MGP_CBAJ_P0043837 Adcy5 protein_coding protein_coding MGP_CBAJ_T0098956.1 MGP_CBAJ_G0037211.1 mouse_genomes_project 16 37127223 37127327 + Gm24218 snRNA snRNA MGP_CBAJ_T0017279.1 MGP_CBAJ_G0015074.1 mouse_genomes_project 16 104818949 104821603 + Gm15342 processed_transcript processed_transcript MGP_CBAJ_T0042897.1 MGP_CBAJ_G0022252.1 mouse_genomes_project 16 13362929 13408252 - MGP_CBAJ_P0042897 Ube2v2 protein_coding protein_coding MGP_CBAJ_T0098288.1 MGP_CBAJ_G0036556.1 mouse_genomes_project 16 1433799 1435511 - Gm15835 sense_intronic sense_intronic MGP_CBAJ_T0044948.1 MGP_CBAJ_G0022781.1 mouse_genomes_project 16 104941610 104950985 + Wrb protein_coding retained_intron MGP_CBAJ_T0044949.1 MGP_CBAJ_G0022781.1 mouse_genomes_project 16 104941610 104942960 + Wrb protein_coding processed_transcript MGP_CBAJ_T0044950.1 MGP_CBAJ_G0022781.1 mouse_genomes_project 16 104941610 104954058 + MGP_CBAJ_P0044950 Wrb protein_coding protein_coding MGP_CBAJ_T0044951.1 MGP_CBAJ_G0022781.1 mouse_genomes_project 16 104941614 104948032 + MGP_CBAJ_P0044951 Wrb protein_coding protein_coding MGP_CBAJ_T0100218.1 MGP_CBAJ_G0038473.1 mouse_genomes_project 16 55949461 55949569 - Gm22459 snoRNA snoRNA MGP_CBAJ_T0044588.1 MGP_CBAJ_G0022687.1 mouse_genomes_project 16 96265990 96266871 - MGP_CBAJ_P0044588 2310079G19Rik protein_coding protein_coding MGP_CBAJ_T0009990.1 MGP_CBAJ_G0008128.1 mouse_genomes_project 16 11049071 11049150 + Mir193b miRNA miRNA MGP_CBAJ_T0042485.1 MGP_CBAJ_G0022151.1 mouse_genomes_project 16 281596 289210 + MGP_CBAJ_P0042485 Zfp263 protein_coding protein_coding MGP_CBAJ_T0042486.1 MGP_CBAJ_G0022151.1 mouse_genomes_project 16 281678 289219 + Zfp263 protein_coding retained_intron MGP_CBAJ_T0042487.1 MGP_CBAJ_G0022151.1 mouse_genomes_project 16 281685 288323 + Zfp263 protein_coding processed_transcript MGP_CBAJ_T0042488.1 MGP_CBAJ_G0022151.1 mouse_genomes_project 16 281735 289219 + MGP_CBAJ_P0042488 Zfp263 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042489.1 MGP_CBAJ_G0022151.1 mouse_genomes_project 16 281863 287710 + Zfp263 protein_coding processed_transcript MGP_CBAJ_T0042490.1 MGP_CBAJ_G0022151.1 mouse_genomes_project 16 282100 287535 + Zfp263 protein_coding processed_transcript MGP_CBAJ_T0042491.1 MGP_CBAJ_G0022151.1 mouse_genomes_project 16 286315 289213 + MGP_CBAJ_P0042491 Zfp263 protein_coding protein_coding MGP_CBAJ_T0003579.1 MGP_CBAJ_G0003241.1 mouse_genomes_project 16 11389578 11397831 + Pla2g10os antisense antisense MGP_CBAJ_T0100206.1 MGP_CBAJ_G0038461.1 mouse_genomes_project 16 31998267 31998400 + Gm26419 snoRNA snoRNA MGP_CBAJ_T0044407.1 MGP_CBAJ_G0022624.1 mouse_genomes_project 16 62482225 62483333 - MGP_CBAJ_P0044407 protein_coding protein_coding MGP_CBAJ_T0043336.1 MGP_CBAJ_G0022349.1 mouse_genomes_project 16 19026330 19036219 + MGP_CBAJ_P0043336 Vwa5b2 protein_coding protein_coding MGP_CBAJ_T0043337.1 MGP_CBAJ_G0022349.1 mouse_genomes_project 16 19026441 19027596 + Vwa5b2 protein_coding processed_transcript MGP_CBAJ_T0043338.1 MGP_CBAJ_G0022349.1 mouse_genomes_project 16 19026441 19043109 + MGP_CBAJ_P0043338 Vwa5b2 protein_coding protein_coding MGP_CBAJ_T0043339.1 MGP_CBAJ_G0022349.1 mouse_genomes_project 16 19026443 19028945 + Vwa5b2 protein_coding processed_transcript MGP_CBAJ_T0043340.1 MGP_CBAJ_G0022349.1 mouse_genomes_project 16 19026710 19028979 + Vwa5b2 protein_coding retained_intron MGP_CBAJ_T0043341.1 MGP_CBAJ_G0022349.1 mouse_genomes_project 16 19026918 19027391 + Vwa5b2 protein_coding retained_intron MGP_CBAJ_T0043342.1 MGP_CBAJ_G0022349.1 mouse_genomes_project 16 19026922 19043115 + MGP_CBAJ_P0043342 Vwa5b2 protein_coding unknown_likely_coding MGP_CBAJ_T0043343.1 MGP_CBAJ_G0022349.1 mouse_genomes_project 16 19026949 19030148 + Vwa5b2 protein_coding retained_intron MGP_CBAJ_T0043344.1 MGP_CBAJ_G0022349.1 mouse_genomes_project 16 19027005 19036214 + MGP_CBAJ_P0043344 Vwa5b2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043345.1 MGP_CBAJ_G0022349.1 mouse_genomes_project 16 19028914 19043106 + MGP_CBAJ_P0043345 Vwa5b2 protein_coding protein_coding MGP_CBAJ_T0043346.1 MGP_CBAJ_G0022349.1 mouse_genomes_project 16 19040526 19043109 + Vwa5b2 protein_coding retained_intron MGP_CBAJ_T0017273.1 MGP_CBAJ_G0015073.1 mouse_genomes_project 16 101697848 101716945 - 1810053B23Rik processed_transcript lincRNA MGP_CBAJ_T0017274.1 MGP_CBAJ_G0015073.1 mouse_genomes_project 16 101698293 101707776 - 1810053B23Rik processed_transcript lincRNA MGP_CBAJ_T0017275.1 MGP_CBAJ_G0015073.1 mouse_genomes_project 16 101698848 101708648 - 1810053B23Rik processed_transcript lincRNA MGP_CBAJ_T0017276.1 MGP_CBAJ_G0015073.1 mouse_genomes_project 16 101699316 101708658 - 1810053B23Rik processed_transcript lincRNA MGP_CBAJ_T0017277.1 MGP_CBAJ_G0015073.1 mouse_genomes_project 16 101700631 101717776 - 1810053B23Rik processed_transcript retained_intron MGP_CBAJ_T0017278.1 MGP_CBAJ_G0015073.1 mouse_genomes_project 16 101701370 101717744 - 1810053B23Rik processed_transcript retained_intron MGP_CBAJ_T0044608.1 MGP_CBAJ_G0022705.1 mouse_genomes_project 16 96680230 96680610 - MGP_CBAJ_P0044608 Krtap22-2 protein_coding protein_coding MGP_CBAJ_T0003605.1 MGP_CBAJ_G0003262.1 mouse_genomes_project 16 39612794 39622977 - antisense antisense MGP_CBAJ_T0000926.1 MGP_CBAJ_G0000860.1 mouse_genomes_project 16 81979938 81981598 + TEC TEC MGP_CBAJ_T0043706.1 MGP_CBAJ_G0022444.1 mouse_genomes_project 16 32604529 32634261 + MGP_CBAJ_P0043706 Tfrc protein_coding protein_coding MGP_CBAJ_T0043707.1 MGP_CBAJ_G0022444.1 mouse_genomes_project 16 32604592 32625164 + MGP_CBAJ_P0043707 Tfrc protein_coding protein_coding MGP_CBAJ_T0043708.1 MGP_CBAJ_G0022444.1 mouse_genomes_project 16 32604859 32608859 + MGP_CBAJ_P0043708 Tfrc protein_coding protein_coding MGP_CBAJ_T0043709.1 MGP_CBAJ_G0022444.1 mouse_genomes_project 16 32614071 32615997 + Tfrc protein_coding retained_intron MGP_CBAJ_T0043710.1 MGP_CBAJ_G0022444.1 mouse_genomes_project 16 32617119 32619724 + Tfrc protein_coding retained_intron MGP_CBAJ_T0043711.1 MGP_CBAJ_G0022444.1 mouse_genomes_project 16 32625864 32634257 + Tfrc protein_coding retained_intron MGP_CBAJ_T0042718.1 MGP_CBAJ_G0022208.1 mouse_genomes_project 16 7675834 7688307 + MGP_CBAJ_P0042718 Nubp1 protein_coding protein_coding MGP_CBAJ_T0042719.1 MGP_CBAJ_G0022208.1 mouse_genomes_project 16 7675835 7685551 + Nubp1 protein_coding processed_transcript MGP_CBAJ_T0042720.1 MGP_CBAJ_G0022208.1 mouse_genomes_project 16 7675840 7684430 + Nubp1 protein_coding retained_intron MGP_CBAJ_T0042721.1 MGP_CBAJ_G0022208.1 mouse_genomes_project 16 7675856 7688307 + Nubp1 protein_coding retained_intron MGP_CBAJ_T0042722.1 MGP_CBAJ_G0022208.1 mouse_genomes_project 16 7675950 7685316 + Nubp1 protein_coding retained_intron MGP_CBAJ_T0042724.1 MGP_CBAJ_G0022208.1 mouse_genomes_project 16 7685114 7687225 + Nubp1 protein_coding processed_transcript MGP_CBAJ_T0009992.1 MGP_CBAJ_G0008130.1 mouse_genomes_project 16 11073505 11073606 - Mir6365 miRNA miRNA MGP_CBAJ_T0100228.1 MGP_CBAJ_G0038483.1 mouse_genomes_project 16 79616660 79616795 - Gm22163 snoRNA snoRNA MGP_CBAJ_T0098970.1 MGP_CBAJ_G0037225.1 mouse_genomes_project 16 66446042 66446146 + Gm24164 snRNA snRNA MGP_CBAJ_T0100207.1 MGP_CBAJ_G0038462.1 mouse_genomes_project 16 32182975 32183119 - Gm25848 snoRNA snoRNA MGP_CBAJ_T0042831.1 MGP_CBAJ_G0022236.1 mouse_genomes_project 16 11363713 11390197 - MGP_CBAJ_P0042831 Pla2g10 protein_coding protein_coding MGP_CBAJ_T0042832.1 MGP_CBAJ_G0022236.1 mouse_genomes_project 16 11363715 11390737 - MGP_CBAJ_P0042832 Pla2g10 protein_coding protein_coding MGP_CBAJ_T0042833.1 MGP_CBAJ_G0022236.1 mouse_genomes_project 16 11364050 11390473 - Pla2g10 protein_coding processed_transcript MGP_CBAJ_T0042834.1 MGP_CBAJ_G0022236.1 mouse_genomes_project 16 11384905 11390433 - Pla2g10 protein_coding processed_transcript MGP_CBAJ_T0013009.1 MGP_CBAJ_G0011121.1 mouse_genomes_project 16 52237496 52241580 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097780.1 MGP_CBAJ_G0036053.1 mouse_genomes_project 16 52018557 52020361 + pseudogene pseudogene MGP_CBAJ_T0012986.1 MGP_CBAJ_G0011098.1 mouse_genomes_project 16 31831806 31832686 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0044088.1 MGP_CBAJ_G0022533.1 mouse_genomes_project 16 45521695 45531711 - MGP_CBAJ_P0044088 Zdhhc23 protein_coding protein_coding MGP_CBAJ_T0044089.1 MGP_CBAJ_G0022533.1 mouse_genomes_project 16 45521763 45531668 - MGP_CBAJ_P0044089 Zdhhc23 protein_coding protein_coding MGP_CBAJ_T0011278.1 MGP_CBAJ_G0009416.1 mouse_genomes_project 16 5178593 5178867 + Gm23476 misc_RNA misc_RNA MGP_CBAJ_T0044566.1 MGP_CBAJ_G0022680.1 mouse_genomes_project 16 94971217 94984711 - MGP_CBAJ_P0044566 Cct8 protein_coding protein_coding MGP_CBAJ_T0044567.1 MGP_CBAJ_G0022680.1 mouse_genomes_project 16 94971879 94984626 - MGP_CBAJ_P0044567 Cct8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044568.1 MGP_CBAJ_G0022680.1 mouse_genomes_project 16 94971879 94984626 - MGP_CBAJ_P0044568 Cct8 protein_coding protein_coding MGP_CBAJ_T0044569.1 MGP_CBAJ_G0022680.1 mouse_genomes_project 16 94972802 94977681 - MGP_CBAJ_P0044569 Cct8 protein_coding protein_coding MGP_CBAJ_T0044570.1 MGP_CBAJ_G0022680.1 mouse_genomes_project 16 94974296 94974928 - Cct8 protein_coding retained_intron MGP_CBAJ_T0044571.1 MGP_CBAJ_G0022680.1 mouse_genomes_project 16 94974436 94975213 - Cct8 protein_coding retained_intron MGP_CBAJ_T0044572.1 MGP_CBAJ_G0022680.1 mouse_genomes_project 16 94974584 94975355 - Cct8 protein_coding retained_intron MGP_CBAJ_T0044573.1 MGP_CBAJ_G0022680.1 mouse_genomes_project 16 94977682 94980286 - Cct8 protein_coding processed_transcript MGP_CBAJ_T0044574.1 MGP_CBAJ_G0022680.1 mouse_genomes_project 16 94977768 94984697 - MGP_CBAJ_P0044574 Cct8 protein_coding protein_coding MGP_CBAJ_T0044575.1 MGP_CBAJ_G0022680.1 mouse_genomes_project 16 94979325 94984542 - MGP_CBAJ_P0044575 Cct8 protein_coding protein_coding MGP_CBAJ_T0006784.1 MGP_CBAJ_G0005584.1 mouse_genomes_project 16 102252434 102255173 - 2310043M15Rik lincRNA lincRNA MGP_CBAJ_T0044593.1 MGP_CBAJ_G0022692.1 mouse_genomes_project 16 96410967 96413979 - MGP_CBAJ_P0044593 Krtap13 protein_coding protein_coding MGP_CBAJ_T0010036.1 MGP_CBAJ_G0008174.1 mouse_genomes_project 16 83641366 83641460 + Mirlet7c-1 miRNA miRNA MGP_CBAJ_T0013021.1 MGP_CBAJ_G0011133.1 mouse_genomes_project 16 81575231 81576144 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0003593.1 MGP_CBAJ_G0003254.1 mouse_genomes_project 16 34005979 34030437 - Gm15658 antisense antisense MGP_CBAJ_T0044284.1 MGP_CBAJ_G0022584.1 mouse_genomes_project 16 58731770 58799610 - MGP_CBAJ_P0044284 Nxpe3 protein_coding protein_coding MGP_CBAJ_T0043687.1 MGP_CBAJ_G0022435.1 mouse_genomes_project 16 32188610 32198042 + Wdr53 protein_coding processed_transcript MGP_CBAJ_T0043688.1 MGP_CBAJ_G0022435.1 mouse_genomes_project 16 32188610 32198363 + MGP_CBAJ_P0043688 Wdr53 protein_coding protein_coding MGP_CBAJ_T0043689.1 MGP_CBAJ_G0022435.1 mouse_genomes_project 16 32188636 32198372 + MGP_CBAJ_P0043689 Wdr53 protein_coding protein_coding MGP_CBAJ_T0043690.1 MGP_CBAJ_G0022435.1 mouse_genomes_project 16 32188784 32193439 + Wdr53 protein_coding retained_intron MGP_CBAJ_T0044628.1 MGP_CBAJ_G0022723.1 mouse_genomes_project 16 97614371 97817274 - MGP_CBAJ_P0044628 Tiam1 protein_coding protein_coding MGP_CBAJ_T0044629.1 MGP_CBAJ_G0022723.1 mouse_genomes_project 16 97614371 97802475 - MGP_CBAJ_P0044629 Tiam1 protein_coding protein_coding MGP_CBAJ_T0044630.1 MGP_CBAJ_G0022723.1 mouse_genomes_project 16 97614371 97817274 - MGP_CBAJ_P0044630 Tiam1 protein_coding protein_coding MGP_CBAJ_T0044631.1 MGP_CBAJ_G0022723.1 mouse_genomes_project 16 97614371 97687942 - MGP_CBAJ_P0044631 Tiam1 protein_coding protein_coding MGP_CBAJ_T0044632.1 MGP_CBAJ_G0022723.1 mouse_genomes_project 16 97614376 97625191 - MGP_CBAJ_P0044632 Tiam1 protein_coding protein_coding MGP_CBAJ_T0044633.1 MGP_CBAJ_G0022723.1 mouse_genomes_project 16 97614988 97645291 - MGP_CBAJ_P0044633 Tiam1 protein_coding protein_coding MGP_CBAJ_T0044634.1 MGP_CBAJ_G0022723.1 mouse_genomes_project 16 97615116 97667972 - Tiam1 protein_coding retained_intron MGP_CBAJ_T0044635.1 MGP_CBAJ_G0022723.1 mouse_genomes_project 16 97615680 97622402 - Tiam1 protein_coding processed_transcript MGP_CBAJ_T0044636.1 MGP_CBAJ_G0022723.1 mouse_genomes_project 16 97618938 97627126 - MGP_CBAJ_P0044636 Tiam1 protein_coding protein_coding MGP_CBAJ_T0044637.1 MGP_CBAJ_G0022723.1 mouse_genomes_project 16 97734695 97817274 - Tiam1 protein_coding processed_transcript MGP_CBAJ_T0044638.1 MGP_CBAJ_G0022723.1 mouse_genomes_project 16 97734736 97802385 - Tiam1 protein_coding processed_transcript MGP_CBAJ_T0044639.1 MGP_CBAJ_G0022723.1 mouse_genomes_project 16 97734806 97757101 - Tiam1 protein_coding processed_transcript MGP_CBAJ_T0044640.1 MGP_CBAJ_G0022723.1 mouse_genomes_project 16 97746346 97791885 - Tiam1 protein_coding retained_intron MGP_CBAJ_T0044641.1 MGP_CBAJ_G0022723.1 mouse_genomes_project 16 97746683 97816468 - Tiam1 protein_coding processed_transcript MGP_CBAJ_T0044642.1 MGP_CBAJ_G0022723.1 mouse_genomes_project 16 97791742 97822655 - Tiam1 protein_coding processed_transcript MGP_CBAJ_T0043943.1 MGP_CBAJ_G0022498.1 mouse_genomes_project 16 37807181 37835974 - MGP_CBAJ_P0043943 Fbxo40 protein_coding protein_coding MGP_CBAJ_T0043944.1 MGP_CBAJ_G0022498.1 mouse_genomes_project 16 37809652 37822510 - Fbxo40 protein_coding processed_transcript MGP_CBAJ_T0043945.1 MGP_CBAJ_G0022498.1 mouse_genomes_project 16 37809761 37814491 - Fbxo40 protein_coding retained_intron MGP_CBAJ_T0043946.1 MGP_CBAJ_G0022498.1 mouse_genomes_project 16 37809794 37822870 - MGP_CBAJ_P0043946 Fbxo40 protein_coding protein_coding MGP_CBAJ_T0012955.1 MGP_CBAJ_G0011067.1 mouse_genomes_project 16 8553519 8554486 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009993.1 MGP_CBAJ_G0008131.1 mouse_genomes_project 16 11514832 11514921 + Gm27734 miRNA miRNA MGP_CBAJ_T0011281.1 MGP_CBAJ_G0009419.1 mouse_genomes_project 16 21414100 21414292 + Gm22481 misc_RNA misc_RNA MGP_CBAJ_T0011284.1 MGP_CBAJ_G0009422.1 mouse_genomes_project 16 42344925 42345076 - Gm27717 misc_RNA misc_RNA MGP_CBAJ_T0043977.1 MGP_CBAJ_G0022505.1 mouse_genomes_project 16 38726247 38791342 + MGP_CBAJ_P0043977 Fstl1 protein_coding protein_coding MGP_CBAJ_T0043978.1 MGP_CBAJ_G0022505.1 mouse_genomes_project 16 38726449 38745774 + Fstl1 protein_coding processed_transcript MGP_CBAJ_T0043979.1 MGP_CBAJ_G0022505.1 mouse_genomes_project 16 38726526 38773771 + Fstl1 protein_coding retained_intron MGP_CBAJ_T0043980.1 MGP_CBAJ_G0022505.1 mouse_genomes_project 16 38770534 38789261 + Fstl1 protein_coding processed_transcript MGP_CBAJ_T0043981.1 MGP_CBAJ_G0022505.1 mouse_genomes_project 16 38777544 38790459 + Fstl1 protein_coding processed_transcript MGP_CBAJ_T0044272.1 MGP_CBAJ_G0022580.1 mouse_genomes_project 16 54392967 54603906 + MGP_CBAJ_P0044272 Cblb protein_coding protein_coding MGP_CBAJ_T0043460.1 MGP_CBAJ_G0022373.1 mouse_genomes_project 16 21640893 21647091 - MGP_CBAJ_P0043460 Crygs protein_coding protein_coding MGP_CBAJ_T0000937.1 MGP_CBAJ_G0000870.1 mouse_genomes_project 16 83666839 83668863 + TEC TEC MGP_CBAJ_T0044589.1 MGP_CBAJ_G0022688.1 mouse_genomes_project 16 96289010 96289983 - MGP_CBAJ_P0044589 Krtap26-1 protein_coding protein_coding MGP_CBAJ_T0098972.1 MGP_CBAJ_G0037227.1 mouse_genomes_project 16 70668478 70668585 + Gm22448 snRNA snRNA MGP_CBAJ_T0097971.1 MGP_CBAJ_G0036244.1 mouse_genomes_project 16 13887874 13887984 - n-R5s31 rRNA rRNA MGP_CBAJ_T0000039.1 MGP_CBAJ_G0000031.1 mouse_genomes_project 16 17357724 17357762 - MGP_CBAJ_P0000039 Iglj3 IG_J_gene IG_J_gene MGP_CBAJ_T0043844.1 MGP_CBAJ_G0022471.1 mouse_genomes_project 16 35991840 36119638 + Sema5b protein_coding retained_intron MGP_CBAJ_T0043845.1 MGP_CBAJ_G0022471.1 mouse_genomes_project 16 35992057 36137476 + MGP_CBAJ_P0043845 Sema5b protein_coding protein_coding MGP_CBAJ_T0043846.1 MGP_CBAJ_G0022471.1 mouse_genomes_project 16 35992266 36137476 + MGP_CBAJ_P0043846 Sema5b protein_coding protein_coding MGP_CBAJ_T0043847.1 MGP_CBAJ_G0022471.1 mouse_genomes_project 16 36129465 36129858 + Sema5b protein_coding retained_intron MGP_CBAJ_T0043848.1 MGP_CBAJ_G0022471.1 mouse_genomes_project 16 36129955 36137954 + MGP_CBAJ_P0043848 Sema5b protein_coding protein_coding MGP_CBAJ_T0043849.1 MGP_CBAJ_G0022471.1 mouse_genomes_project 16 36130805 36131651 + Sema5b protein_coding retained_intron MGP_CBAJ_T0043850.1 MGP_CBAJ_G0022471.1 mouse_genomes_project 16 36134541 36136547 + MGP_CBAJ_P0043850 Sema5b protein_coding protein_coding MGP_CBAJ_T0043851.1 MGP_CBAJ_G0022471.1 mouse_genomes_project 16 36135707 36136687 + Sema5b protein_coding retained_intron MGP_CBAJ_T0044894.1 MGP_CBAJ_G0022774.1 mouse_genomes_project 16 103333110 103595510 - MGP_CBAJ_P0044894 Kcnj6 protein_coding protein_coding MGP_CBAJ_T0044895.1 MGP_CBAJ_G0022774.1 mouse_genomes_project 16 103347472 103595510 - MGP_CBAJ_P0044895 Kcnj6 protein_coding protein_coding MGP_CBAJ_T0044896.1 MGP_CBAJ_G0022774.1 mouse_genomes_project 16 103418107 103452234 - MGP_CBAJ_P0044896 Kcnj6 protein_coding protein_coding MGP_CBAJ_T0006742.1 MGP_CBAJ_G0005554.1 mouse_genomes_project 16 23498021 23499998 - Lppos lincRNA lincRNA MGP_CBAJ_T0042626.1 MGP_CBAJ_G0022182.1 mouse_genomes_project 16 1692584 1706963 - MGP_CBAJ_P0042626 Sept12 protein_coding protein_coding MGP_CBAJ_T0012984.1 MGP_CBAJ_G0011096.1 mouse_genomes_project 16 26764406 26765240 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0043699.1 MGP_CBAJ_G0022441.1 mouse_genomes_project 16 32404669 32425839 + Pcyt1a protein_coding retained_intron MGP_CBAJ_T0043700.1 MGP_CBAJ_G0022441.1 mouse_genomes_project 16 32404691 32429027 + Pcyt1a protein_coding retained_intron MGP_CBAJ_T0043701.1 MGP_CBAJ_G0022441.1 mouse_genomes_project 16 32404743 32451506 + MGP_CBAJ_P0043701 Pcyt1a protein_coding protein_coding MGP_CBAJ_T0043702.1 MGP_CBAJ_G0022441.1 mouse_genomes_project 16 32404751 32428897 + Pcyt1a protein_coding retained_intron MGP_CBAJ_T0042537.1 MGP_CBAJ_G0022162.1 mouse_genomes_project 16 610414 612729 + MGP_CBAJ_P0042537 Dnase1 protein_coding protein_coding MGP_CBAJ_T0042538.1 MGP_CBAJ_G0022162.1 mouse_genomes_project 16 610442 613497 + MGP_CBAJ_P0042538 Dnase1 protein_coding protein_coding MGP_CBAJ_T0042539.1 MGP_CBAJ_G0022162.1 mouse_genomes_project 16 610445 611494 + MGP_CBAJ_P0042539 Dnase1 protein_coding protein_coding MGP_CBAJ_T0042540.1 MGP_CBAJ_G0022162.1 mouse_genomes_project 16 610503 613497 + MGP_CBAJ_P0042540 Dnase1 protein_coding protein_coding MGP_CBAJ_T0042541.1 MGP_CBAJ_G0022162.1 mouse_genomes_project 16 610570 613496 + Dnase1 protein_coding retained_intron MGP_CBAJ_T0042542.1 MGP_CBAJ_G0022162.1 mouse_genomes_project 16 610573 613497 + Dnase1 protein_coding retained_intron MGP_CBAJ_T0042543.1 MGP_CBAJ_G0022162.1 mouse_genomes_project 16 610627 613348 + MGP_CBAJ_P0042543 Dnase1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042544.1 MGP_CBAJ_G0022162.1 mouse_genomes_project 16 610748 611733 + Dnase1 protein_coding retained_intron MGP_CBAJ_T0042545.1 MGP_CBAJ_G0022162.1 mouse_genomes_project 16 610776 612812 + Dnase1 protein_coding retained_intron MGP_CBAJ_T0042546.1 MGP_CBAJ_G0022162.1 mouse_genomes_project 16 611694 612344 + Dnase1 protein_coding retained_intron MGP_CBAJ_T0042547.1 MGP_CBAJ_G0022162.1 mouse_genomes_project 16 612602 613497 + MGP_CBAJ_P0042547 Dnase1 protein_coding protein_coding MGP_CBAJ_T0006734.1 MGP_CBAJ_G0005548.1 mouse_genomes_project 16 15300860 15306172 - Gm26635 lincRNA lincRNA MGP_CBAJ_T0100235.1 MGP_CBAJ_G0038490.1 mouse_genomes_project 16 92343389 92343542 + Gm27295 snoRNA snoRNA MGP_CBAJ_T0017264.1 MGP_CBAJ_G0015066.1 mouse_genomes_project 16 94984836 94998375 + processed_transcript retained_intron MGP_CBAJ_T0017265.1 MGP_CBAJ_G0015066.1 mouse_genomes_project 16 94984910 94998580 + processed_transcript processed_transcript MGP_CBAJ_T0098966.1 MGP_CBAJ_G0037221.1 mouse_genomes_project 16 53194520 53194627 - Gm24925 snRNA snRNA MGP_CBAJ_T0012985.1 MGP_CBAJ_G0011097.1 mouse_genomes_project 16 28876865 28877259 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0043234.1 MGP_CBAJ_G0022320.1 mouse_genomes_project 16 17032056 17062911 - MGP_CBAJ_P0043234 Cdc45 protein_coding protein_coding MGP_CBAJ_T0043235.1 MGP_CBAJ_G0022320.1 mouse_genomes_project 16 17032062 17062565 - MGP_CBAJ_P0043235 Cdc45 protein_coding protein_coding MGP_CBAJ_T0043236.1 MGP_CBAJ_G0022320.1 mouse_genomes_project 16 17058294 17062926 - MGP_CBAJ_P0043236 Cdc45 protein_coding protein_coding MGP_CBAJ_T0010007.1 MGP_CBAJ_G0008145.1 mouse_genomes_project 16 21347610 21347739 - Mir8095 miRNA miRNA MGP_CBAJ_T0042648.1 MGP_CBAJ_G0022187.1 mouse_genomes_project 16 1799608 1850742 - MGP_CBAJ_P0042648 Ppl protein_coding protein_coding MGP_CBAJ_T0097972.1 MGP_CBAJ_G0036245.1 mouse_genomes_project 16 29831139 29831242 - n-R5s32 rRNA rRNA MGP_CBAJ_T0043970.1 MGP_CBAJ_G0022503.1 mouse_genomes_project 16 38491797 38545713 + MGP_CBAJ_P0043970 Hgd protein_coding protein_coding MGP_CBAJ_T0043971.1 MGP_CBAJ_G0022503.1 mouse_genomes_project 16 38491894 38545713 + Hgd protein_coding processed_transcript MGP_CBAJ_T0043972.1 MGP_CBAJ_G0022503.1 mouse_genomes_project 16 38491898 38525842 + Hgd protein_coding retained_intron MGP_CBAJ_T0043973.1 MGP_CBAJ_G0022503.1 mouse_genomes_project 16 38491926 38529944 + Hgd protein_coding processed_transcript MGP_CBAJ_T0043974.1 MGP_CBAJ_G0022503.1 mouse_genomes_project 16 38535551 38545713 + Hgd protein_coding processed_transcript MGP_CBAJ_T0006736.1 MGP_CBAJ_G0005550.1 mouse_genomes_project 16 19863714 19914681 - lincRNA lincRNA MGP_CBAJ_T0003619.1 MGP_CBAJ_G0003272.1 mouse_genomes_project 16 98997692 99003426 + antisense antisense MGP_CBAJ_T0009987.1 MGP_CBAJ_G0008125.1 mouse_genomes_project 16 5642482 5642590 - Gm26445 miRNA miRNA MGP_CBAJ_T0044306.1 MGP_CBAJ_G0022589.1 mouse_genomes_project 16 58944413 58949531 - MGP_CBAJ_P0044306 Trmt10c protein_coding protein_coding MGP_CBAJ_T0042492.1 MGP_CBAJ_G0022152.1 mouse_genomes_project 16 381286 382225 + MGP_CBAJ_P0042492 Olfr15 protein_coding protein_coding MGP_CBAJ_T0100224.1 MGP_CBAJ_G0038479.1 mouse_genomes_project 16 64671819 64671896 + Gm23852 snoRNA snoRNA MGP_CBAJ_T0010042.1 MGP_CBAJ_G0008180.1 mouse_genomes_project 16 100087124 100087202 - Gm27773 miRNA miRNA MGP_CBAJ_T0003591.1 MGP_CBAJ_G0003252.1 mouse_genomes_project 16 32669185 32672160 - Tnk2os antisense antisense MGP_CBAJ_T0043877.1 MGP_CBAJ_G0022479.1 mouse_genomes_project 16 36574000 36605696 - MGP_CBAJ_P0043877 Fam162a protein_coding protein_coding MGP_CBAJ_T0013005.1 MGP_CBAJ_G0011117.1 mouse_genomes_project 16 47134549 47140546 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100220.1 MGP_CBAJ_G0038475.1 mouse_genomes_project 16 57387180 57387305 + Gm23180 snoRNA snoRNA MGP_CBAJ_T0044033.1 MGP_CBAJ_G0022522.1 mouse_genomes_project 16 39800837 39834116 + MGP_CBAJ_P0044033 B4galt4 protein_coding protein_coding MGP_CBAJ_T0044034.1 MGP_CBAJ_G0022522.1 mouse_genomes_project 16 39800880 39834934 + MGP_CBAJ_P0044034 B4galt4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044035.1 MGP_CBAJ_G0022522.1 mouse_genomes_project 16 39826904 39834397 + MGP_CBAJ_P0044035 B4galt4 protein_coding protein_coding MGP_CBAJ_T0044036.1 MGP_CBAJ_G0022522.1 mouse_genomes_project 16 39828985 39832364 + B4galt4 protein_coding retained_intron MGP_CBAJ_T0044791.1 MGP_CBAJ_G0022752.1 mouse_genomes_project 16 100222951 100254885 + MGP_CBAJ_P0044791 Slc5a3 protein_coding protein_coding MGP_CBAJ_T0044792.1 MGP_CBAJ_G0022752.1 mouse_genomes_project 16 100245456 100251216 + MGP_CBAJ_P0044792 Slc5a3 protein_coding protein_coding MGP_CBAJ_T0044702.1 MGP_CBAJ_G0022740.1 mouse_genomes_project 16 99460368 99480197 + MGP_CBAJ_P0044702 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044703.1 MGP_CBAJ_G0022740.1 mouse_genomes_project 16 99460439 99480209 + MGP_CBAJ_P0044703 protein_coding protein_coding MGP_CBAJ_T0044704.1 MGP_CBAJ_G0022740.1 mouse_genomes_project 16 99460524 99474403 + protein_coding retained_intron MGP_CBAJ_T0044705.1 MGP_CBAJ_G0022740.1 mouse_genomes_project 16 99460524 99479303 + MGP_CBAJ_P0044705 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044706.1 MGP_CBAJ_G0022740.1 mouse_genomes_project 16 99460648 99468806 + protein_coding processed_transcript MGP_CBAJ_T0098933.1 MGP_CBAJ_G0037188.1 mouse_genomes_project 16 5321543 5321647 + Gm26159 snRNA snRNA MGP_CBAJ_T0017231.1 MGP_CBAJ_G0015054.1 mouse_genomes_project 16 16628039 16638150 + processed_transcript antisense MGP_CBAJ_T0017232.1 MGP_CBAJ_G0015054.1 mouse_genomes_project 16 16628242 16637519 + processed_transcript retained_intron MGP_CBAJ_T0044990.1 MGP_CBAJ_G0022793.1 mouse_genomes_project 16 106737167 106761925 - MGP_CBAJ_P0044990 Ripk4 protein_coding protein_coding MGP_CBAJ_T0044991.1 MGP_CBAJ_G0022793.1 mouse_genomes_project 16 106737167 106761679 - MGP_CBAJ_P0044991 Ripk4 protein_coding protein_coding MGP_CBAJ_T0017236.1 MGP_CBAJ_G0015058.1 mouse_genomes_project 16 26065255 26116123 - Gm20319 processed_transcript processed_transcript MGP_CBAJ_T0017237.1 MGP_CBAJ_G0015058.1 mouse_genomes_project 16 26065553 26116134 - Gm20319 processed_transcript processed_transcript MGP_CBAJ_T0017238.1 MGP_CBAJ_G0015058.1 mouse_genomes_project 16 26090370 26116134 - Gm20319 processed_transcript processed_transcript MGP_CBAJ_T0043990.1 MGP_CBAJ_G0022510.1 mouse_genomes_project 16 39256422 39311823 - MGP_CBAJ_P0043990 Nr1i2 protein_coding protein_coding MGP_CBAJ_T0042790.1 MGP_CBAJ_G0022225.1 mouse_genomes_project 16 8595759 8632631 - MGP_CBAJ_P0042790 Gspt1 protein_coding protein_coding MGP_CBAJ_T0042791.1 MGP_CBAJ_G0022225.1 mouse_genomes_project 16 8596519 8632570 - MGP_CBAJ_P0042791 Gspt1 protein_coding protein_coding MGP_CBAJ_T0042792.1 MGP_CBAJ_G0022225.1 mouse_genomes_project 16 8596868 8600969 - MGP_CBAJ_P0042792 Gspt1 protein_coding protein_coding MGP_CBAJ_T0042793.1 MGP_CBAJ_G0022225.1 mouse_genomes_project 16 8599054 8604982 - Gspt1 protein_coding retained_intron MGP_CBAJ_T0042794.1 MGP_CBAJ_G0022225.1 mouse_genomes_project 16 8607379 8617020 - Gspt1 protein_coding retained_intron MGP_CBAJ_T0044659.1 MGP_CBAJ_G0022730.1 mouse_genomes_project 16 98815529 98818395 + Eva1c protein_coding processed_transcript MGP_CBAJ_T0044660.1 MGP_CBAJ_G0022730.1 mouse_genomes_project 16 98815529 98914700 + MGP_CBAJ_P0044660 Eva1c protein_coding protein_coding MGP_CBAJ_T0044661.1 MGP_CBAJ_G0022730.1 mouse_genomes_project 16 98819591 98915114 + MGP_CBAJ_P0044661 Eva1c protein_coding nonsense_mediated_decay MGP_CBAJ_T0044662.1 MGP_CBAJ_G0022730.1 mouse_genomes_project 16 98819650 98914658 + MGP_CBAJ_P0044662 Eva1c protein_coding nonsense_mediated_decay MGP_CBAJ_T0044663.1 MGP_CBAJ_G0022730.1 mouse_genomes_project 16 98819896 98914700 + MGP_CBAJ_P0044663 Eva1c protein_coding protein_coding MGP_CBAJ_T0044664.1 MGP_CBAJ_G0022730.1 mouse_genomes_project 16 98819896 98914700 + MGP_CBAJ_P0044664 Eva1c protein_coding protein_coding MGP_CBAJ_T0044665.1 MGP_CBAJ_G0022730.1 mouse_genomes_project 16 98838691 98897631 + MGP_CBAJ_P0044665 Eva1c protein_coding protein_coding MGP_CBAJ_T0042689.1 MGP_CBAJ_G0022200.1 mouse_genomes_project 16 5708301 5711437 + MGP_CBAJ_P0042689 Gm43786 protein_coding protein_coding MGP_CBAJ_T0042690.1 MGP_CBAJ_G0022200.1 mouse_genomes_project 16 5710361 5711443 + Gm43786 protein_coding processed_transcript MGP_CBAJ_T0043890.1 MGP_CBAJ_G0022487.1 mouse_genomes_project 16 37160774 37175475 - MGP_CBAJ_P0043890 protein_coding protein_coding MGP_CBAJ_T0000919.1 MGP_CBAJ_G0000853.1 mouse_genomes_project 16 17562885 17564197 + TEC TEC MGP_CBAJ_T0006785.1 MGP_CBAJ_G0005585.1 mouse_genomes_project 16 104509562 104511841 - 2810404F17Rik lincRNA lincRNA MGP_CBAJ_T0006775.1 MGP_CBAJ_G0005579.1 mouse_genomes_project 16 95316350 95328053 + 2810407A14Rik lincRNA lincRNA MGP_CBAJ_T0006776.1 MGP_CBAJ_G0005579.1 mouse_genomes_project 16 95319839 95373717 + 2810407A14Rik lincRNA lincRNA MGP_CBAJ_T0006723.1 MGP_CBAJ_G0005538.1 mouse_genomes_project 16 404691 431671 + Gm26675 lincRNA lincRNA MGP_CBAJ_T0010029.1 MGP_CBAJ_G0008167.1 mouse_genomes_project 16 64242490 64242603 - Gm27784 miRNA miRNA MGP_CBAJ_T0043134.1 MGP_CBAJ_G0022301.1 mouse_genomes_project 16 16027505 16030514 - MGP_CBAJ_P0043134 Slc25a1 protein_coding protein_coding MGP_CBAJ_T0043135.1 MGP_CBAJ_G0022301.1 mouse_genomes_project 16 16027976 16029638 - Slc25a1 protein_coding retained_intron MGP_CBAJ_T0043136.1 MGP_CBAJ_G0022301.1 mouse_genomes_project 16 16028010 16029711 - MGP_CBAJ_P0043136 Slc25a1 protein_coding protein_coding MGP_CBAJ_T0043137.1 MGP_CBAJ_G0022301.1 mouse_genomes_project 16 16028560 16030182 - Slc25a1 protein_coding retained_intron MGP_CBAJ_T0043138.1 MGP_CBAJ_G0022301.1 mouse_genomes_project 16 16029444 16030424 - Slc25a1 protein_coding retained_intron MGP_CBAJ_T0043139.1 MGP_CBAJ_G0022301.1 mouse_genomes_project 16 16029711 16030504 - Slc25a1 protein_coding retained_intron MGP_CBAJ_T0100204.1 MGP_CBAJ_G0038459.1 mouse_genomes_project 16 30683131 30683266 + Gm25375 snoRNA snoRNA MGP_CBAJ_T0044392.1 MGP_CBAJ_G0022616.1 mouse_genomes_project 16 62112049 62113153 - MGP_CBAJ_P0044392 Olfr181 protein_coding protein_coding MGP_CBAJ_T0044393.1 MGP_CBAJ_G0022616.1 mouse_genomes_project 16 62112049 62114952 - MGP_CBAJ_P0044393 Olfr181 protein_coding protein_coding MGP_CBAJ_T0044394.1 MGP_CBAJ_G0022616.1 mouse_genomes_project 16 62112677 62114952 - MGP_CBAJ_P0044394 Olfr181 protein_coding protein_coding MGP_CBAJ_T0044395.1 MGP_CBAJ_G0022616.1 mouse_genomes_project 16 62112825 62114916 - MGP_CBAJ_P0044395 Olfr181 protein_coding protein_coding MGP_CBAJ_T0043119.1 MGP_CBAJ_G0022293.1 mouse_genomes_project 16 15887519 15898441 + MGP_CBAJ_P0043119 Scarf2 protein_coding protein_coding MGP_CBAJ_T0010004.1 MGP_CBAJ_G0008142.1 mouse_genomes_project 16 18223111 18223213 - Gm27883 miRNA miRNA MGP_CBAJ_T0043415.1 MGP_CBAJ_G0022361.1 mouse_genomes_project 16 19816946 19835504 + MGP_CBAJ_P0043415 Ephb3 protein_coding protein_coding MGP_CBAJ_T0043416.1 MGP_CBAJ_G0022361.1 mouse_genomes_project 16 19823284 19835167 + MGP_CBAJ_P0043416 Ephb3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043417.1 MGP_CBAJ_G0022361.1 mouse_genomes_project 16 19829016 19835505 + Ephb3 protein_coding retained_intron MGP_CBAJ_T0043418.1 MGP_CBAJ_G0022361.1 mouse_genomes_project 16 19833885 19834887 + Ephb3 protein_coding retained_intron MGP_CBAJ_T0006755.1 MGP_CBAJ_G0005567.1 mouse_genomes_project 16 45931134 45934212 + Gm26732 lincRNA lincRNA MGP_CBAJ_T0013022.1 MGP_CBAJ_G0011134.1 mouse_genomes_project 16 82004260 82005008 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101675.1 MGP_CBAJ_G0039706.1 mouse_genomes_project 16 62155173 62156571 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0044041.1 MGP_CBAJ_G0022526.1 mouse_genomes_project 16 41177988 42252147 + MGP_CBAJ_P0044041 Lsamp protein_coding protein_coding MGP_CBAJ_T0044042.1 MGP_CBAJ_G0022526.1 mouse_genomes_project 16 41177998 43572346 + MGP_CBAJ_P0044042 Lsamp protein_coding protein_coding MGP_CBAJ_T0044043.1 MGP_CBAJ_G0022526.1 mouse_genomes_project 16 41178013 42493244 + MGP_CBAJ_P0044043 Lsamp protein_coding protein_coding MGP_CBAJ_T0044044.1 MGP_CBAJ_G0022526.1 mouse_genomes_project 16 41178013 42706378 + MGP_CBAJ_P0044044 Lsamp protein_coding protein_coding MGP_CBAJ_T0044045.1 MGP_CBAJ_G0022526.1 mouse_genomes_project 16 41178222 41903741 + Lsamp protein_coding processed_transcript MGP_CBAJ_T0044046.1 MGP_CBAJ_G0022526.1 mouse_genomes_project 16 42851974 43542268 + MGP_CBAJ_P0044046 Lsamp protein_coding protein_coding MGP_CBAJ_T0044047.1 MGP_CBAJ_G0022526.1 mouse_genomes_project 16 42852153 43580173 + MGP_CBAJ_P0044047 Lsamp protein_coding protein_coding MGP_CBAJ_T0044048.1 MGP_CBAJ_G0022526.1 mouse_genomes_project 16 42852535 42858368 + MGP_CBAJ_P0044048 Lsamp protein_coding protein_coding MGP_CBAJ_T0044049.1 MGP_CBAJ_G0022526.1 mouse_genomes_project 16 43540038 43570509 + MGP_CBAJ_P0044049 Lsamp protein_coding protein_coding MGP_CBAJ_T0044050.1 MGP_CBAJ_G0022526.1 mouse_genomes_project 16 43540079 43570334 + MGP_CBAJ_P0044050 Lsamp protein_coding protein_coding MGP_CBAJ_T0003620.1 MGP_CBAJ_G0003273.1 mouse_genomes_project 16 100060353 100064614 + Gm15976 antisense antisense MGP_CBAJ_T0011291.1 MGP_CBAJ_G0009429.1 mouse_genomes_project 16 91688813 91689135 - Gm25292 misc_RNA misc_RNA MGP_CBAJ_T0003606.1 MGP_CBAJ_G0003263.1 mouse_genomes_project 16 39911494 39911831 + antisense antisense MGP_CBAJ_T0044008.1 MGP_CBAJ_G0022517.1 mouse_genomes_project 16 39489802 39519236 + MGP_CBAJ_P0044008 Cd80 protein_coding protein_coding MGP_CBAJ_T0098291.1 MGP_CBAJ_G0036559.1 mouse_genomes_project 16 25291070 25302933 - AU015336 sense_intronic sense_intronic MGP_CBAJ_T0044924.1 MGP_CBAJ_G0022778.1 mouse_genomes_project 16 104740446 104751259 - MGP_CBAJ_P0044924 Psmg1 protein_coding protein_coding MGP_CBAJ_T0044925.1 MGP_CBAJ_G0022778.1 mouse_genomes_project 16 104740550 104751189 - MGP_CBAJ_P0044925 Psmg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044926.1 MGP_CBAJ_G0022778.1 mouse_genomes_project 16 104740550 104751189 - MGP_CBAJ_P0044926 Psmg1 protein_coding protein_coding MGP_CBAJ_T0044927.1 MGP_CBAJ_G0022778.1 mouse_genomes_project 16 104748284 104750197 - Psmg1 protein_coding retained_intron MGP_CBAJ_T0097779.1 MGP_CBAJ_G0036052.1 mouse_genomes_project 16 36901512 36901606 - pseudogene pseudogene MGP_CBAJ_T0043263.1 MGP_CBAJ_G0022327.1 mouse_genomes_project 16 17732737 17733777 - MGP_CBAJ_P0043263 Olfr165 protein_coding protein_coding MGP_CBAJ_T0043265.1 MGP_CBAJ_G0022327.1 mouse_genomes_project 16 17733333 17745937 - MGP_CBAJ_P0043265 Olfr165 protein_coding protein_coding MGP_CBAJ_T0042808.1 MGP_CBAJ_G0022229.1 mouse_genomes_project 16 9358827 9388776 + MGP_CBAJ_P0042808 Gm9961 protein_coding protein_coding MGP_CBAJ_T0010011.1 MGP_CBAJ_G0008149.1 mouse_genomes_project 16 28114877 28114986 - Mir690 miRNA miRNA MGP_CBAJ_T0043462.1 MGP_CBAJ_G0022375.1 mouse_genomes_project 16 21699278 21713907 + MGP_CBAJ_P0043462 Dnajb11 protein_coding protein_coding MGP_CBAJ_T0043463.1 MGP_CBAJ_G0022375.1 mouse_genomes_project 16 21699278 21713830 + MGP_CBAJ_P0043463 Dnajb11 protein_coding protein_coding MGP_CBAJ_T0043464.1 MGP_CBAJ_G0022375.1 mouse_genomes_project 16 21699278 21721076 + MGP_CBAJ_P0043464 Dnajb11 protein_coding protein_coding MGP_CBAJ_T0043465.1 MGP_CBAJ_G0022375.1 mouse_genomes_project 16 21699339 21713546 + Dnajb11 protein_coding processed_transcript MGP_CBAJ_T0043466.1 MGP_CBAJ_G0022375.1 mouse_genomes_project 16 21710868 21713748 + Dnajb11 protein_coding processed_transcript MGP_CBAJ_T0043237.1 MGP_CBAJ_G0022321.1 mouse_genomes_project 16 17062717 17066295 + MGP_CBAJ_P0043237 Ufd1l protein_coding protein_coding MGP_CBAJ_T0043238.1 MGP_CBAJ_G0022321.1 mouse_genomes_project 16 17062762 17085214 + MGP_CBAJ_P0043238 Ufd1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0043239.1 MGP_CBAJ_G0022321.1 mouse_genomes_project 16 17062770 17086160 + MGP_CBAJ_P0043239 Ufd1l protein_coding protein_coding MGP_CBAJ_T0043240.1 MGP_CBAJ_G0022321.1 mouse_genomes_project 16 17063232 17066848 + Ufd1l protein_coding processed_transcript MGP_CBAJ_T0043241.1 MGP_CBAJ_G0022321.1 mouse_genomes_project 16 17063232 17086165 + MGP_CBAJ_P0043241 Ufd1l protein_coding protein_coding MGP_CBAJ_T0043242.1 MGP_CBAJ_G0022321.1 mouse_genomes_project 16 17063259 17078601 + MGP_CBAJ_P0043242 Ufd1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0043243.1 MGP_CBAJ_G0022321.1 mouse_genomes_project 16 17063294 17075980 + MGP_CBAJ_P0043243 Ufd1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0043244.1 MGP_CBAJ_G0022321.1 mouse_genomes_project 16 17074163 17085158 + Ufd1l protein_coding retained_intron MGP_CBAJ_T0043245.1 MGP_CBAJ_G0022321.1 mouse_genomes_project 16 17077964 17079359 + MGP_CBAJ_P0043245 Ufd1l protein_coding protein_coding MGP_CBAJ_T0043246.1 MGP_CBAJ_G0022321.1 mouse_genomes_project 16 17078152 17085308 + Ufd1l protein_coding retained_intron MGP_CBAJ_T0003594.1 MGP_CBAJ_G0003255.1 mouse_genomes_project 16 34029680 34040812 - Gm15657 antisense antisense MGP_CBAJ_T0003595.1 MGP_CBAJ_G0003255.1 mouse_genomes_project 16 34039105 34040810 - Gm15657 antisense antisense MGP_CBAJ_T0003596.1 MGP_CBAJ_G0003255.1 mouse_genomes_project 16 34039436 34041588 - Gm15657 antisense antisense MGP_CBAJ_T0098947.1 MGP_CBAJ_G0037202.1 mouse_genomes_project 16 22400328 22400399 + Gm23066 snRNA snRNA MGP_CBAJ_T0000938.1 MGP_CBAJ_G0000871.1 mouse_genomes_project 16 83701776 83704835 + TEC TEC MGP_CBAJ_T0006724.1 MGP_CBAJ_G0005539.1 mouse_genomes_project 16 1617485 1622023 - Gm16861 lincRNA lincRNA MGP_CBAJ_T0044823.1 MGP_CBAJ_G0022764.1 mouse_genomes_project 16 102303173 102351889 + MGP_CBAJ_P0044823 Morc3 protein_coding protein_coding MGP_CBAJ_T0044824.1 MGP_CBAJ_G0022764.1 mouse_genomes_project 16 102303173 102351886 + MGP_CBAJ_P0044824 Morc3 protein_coding protein_coding MGP_CBAJ_T0044825.1 MGP_CBAJ_G0022764.1 mouse_genomes_project 16 102303287 102318312 + Morc3 protein_coding retained_intron MGP_CBAJ_T0044826.1 MGP_CBAJ_G0022764.1 mouse_genomes_project 16 102303309 102350844 + MGP_CBAJ_P0044826 Morc3 protein_coding protein_coding MGP_CBAJ_T0044827.1 MGP_CBAJ_G0022764.1 mouse_genomes_project 16 102303315 102336328 + MGP_CBAJ_P0044827 Morc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044828.1 MGP_CBAJ_G0022764.1 mouse_genomes_project 16 102318194 102322795 + Morc3 protein_coding processed_transcript MGP_CBAJ_T0044829.1 MGP_CBAJ_G0022764.1 mouse_genomes_project 16 102327354 102329504 + Morc3 protein_coding retained_intron MGP_CBAJ_T0100199.1 MGP_CBAJ_G0038454.1 mouse_genomes_project 16 22025205 22025330 + Gm24201 snoRNA snoRNA MGP_CBAJ_T0097969.1 MGP_CBAJ_G0036242.1 mouse_genomes_project 16 5936692 5936785 - Gm22224 rRNA rRNA MGP_CBAJ_T0043779.1 MGP_CBAJ_G0022454.1 mouse_genomes_project 16 33162605 33241228 + MGP_CBAJ_P0043779 Lmln protein_coding protein_coding MGP_CBAJ_T0043780.1 MGP_CBAJ_G0022454.1 mouse_genomes_project 16 33202542 33216035 + Lmln protein_coding retained_intron MGP_CBAJ_T0043781.1 MGP_CBAJ_G0022454.1 mouse_genomes_project 16 33230253 33237444 + Lmln protein_coding retained_intron MGP_CBAJ_T0043782.1 MGP_CBAJ_G0022454.1 mouse_genomes_project 16 33237797 33239139 + Lmln protein_coding processed_transcript MGP_CBAJ_T0100222.1 MGP_CBAJ_G0038477.1 mouse_genomes_project 16 61008544 61008678 - Gm24039 snoRNA snoRNA MGP_CBAJ_T0000131.1 MGP_CBAJ_G0000100.1 mouse_genomes_project 16 17581438 17581882 - MGP_CBAJ_P0000131 Iglv2 IG_V_gene IG_V_gene MGP_CBAJ_T0000132.1 MGP_CBAJ_G0000100.1 mouse_genomes_project 16 17581438 17581897 - MGP_CBAJ_P0000132 Iglv2 IG_V_gene IG_V_gene MGP_CBAJ_T0012962.1 MGP_CBAJ_G0011074.1 mouse_genomes_project 16 12990504 12990974 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010016.1 MGP_CBAJ_G0008154.1 mouse_genomes_project 16 37615243 37615313 + Gm22617 miRNA miRNA MGP_CBAJ_T0042711.1 MGP_CBAJ_G0022205.1 mouse_genomes_project 16 7405574 7465933 + MGP_CBAJ_P0042711 Atf7ip2 protein_coding protein_coding MGP_CBAJ_T0042712.1 MGP_CBAJ_G0022205.1 mouse_genomes_project 16 7405768 7460122 + MGP_CBAJ_P0042712 Atf7ip2 protein_coding protein_coding MGP_CBAJ_T0042713.1 MGP_CBAJ_G0022205.1 mouse_genomes_project 16 7405784 7463696 + MGP_CBAJ_P0042713 Atf7ip2 protein_coding protein_coding MGP_CBAJ_T0042714.1 MGP_CBAJ_G0022205.1 mouse_genomes_project 16 7405809 7434570 + Atf7ip2 protein_coding retained_intron MGP_CBAJ_T0043068.1 MGP_CBAJ_G0022287.1 mouse_genomes_project 16 15627358 15637483 + MGP_CBAJ_P0043068 P2rx6 protein_coding protein_coding MGP_CBAJ_T0043069.1 MGP_CBAJ_G0022287.1 mouse_genomes_project 16 15627358 15636572 + MGP_CBAJ_P0043069 P2rx6 protein_coding protein_coding MGP_CBAJ_T0043070.1 MGP_CBAJ_G0022287.1 mouse_genomes_project 16 15627406 15643272 + MGP_CBAJ_P0043070 P2rx6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044053.1 MGP_CBAJ_G0022528.1 mouse_genomes_project 16 44337825 44977165 + Zbtb20 protein_coding retained_intron MGP_CBAJ_T0044054.1 MGP_CBAJ_G0022528.1 mouse_genomes_project 16 44372275 44564216 + Zbtb20 protein_coding processed_transcript MGP_CBAJ_T0044055.1 MGP_CBAJ_G0022528.1 mouse_genomes_project 16 44372425 45089687 + Zbtb20 protein_coding processed_transcript MGP_CBAJ_T0044056.1 MGP_CBAJ_G0022528.1 mouse_genomes_project 16 44372528 45100074 + MGP_CBAJ_P0044056 Zbtb20 protein_coding protein_coding MGP_CBAJ_T0044057.1 MGP_CBAJ_G0022528.1 mouse_genomes_project 16 44372535 44977064 + Zbtb20 protein_coding retained_intron MGP_CBAJ_T0044058.1 MGP_CBAJ_G0022528.1 mouse_genomes_project 16 44736669 45133857 + MGP_CBAJ_P0044058 Zbtb20 protein_coding protein_coding MGP_CBAJ_T0044059.1 MGP_CBAJ_G0022528.1 mouse_genomes_project 16 44736828 44807189 + Zbtb20 protein_coding retained_intron MGP_CBAJ_T0044060.1 MGP_CBAJ_G0022528.1 mouse_genomes_project 16 44873916 45089667 + Zbtb20 protein_coding processed_transcript MGP_CBAJ_T0044061.1 MGP_CBAJ_G0022528.1 mouse_genomes_project 16 44874326 45101100 + Zbtb20 protein_coding retained_intron MGP_CBAJ_T0044062.1 MGP_CBAJ_G0022528.1 mouse_genomes_project 16 44874721 45133804 + MGP_CBAJ_P0044062 Zbtb20 protein_coding protein_coding MGP_CBAJ_T0044063.1 MGP_CBAJ_G0022528.1 mouse_genomes_project 16 44875052 45133811 + MGP_CBAJ_P0044063 Zbtb20 protein_coding protein_coding MGP_CBAJ_T0044064.1 MGP_CBAJ_G0022528.1 mouse_genomes_project 16 45018723 45099542 + MGP_CBAJ_P0044064 Zbtb20 protein_coding protein_coding MGP_CBAJ_T0044065.1 MGP_CBAJ_G0022528.1 mouse_genomes_project 16 45018731 45091681 + MGP_CBAJ_P0044065 Zbtb20 protein_coding protein_coding MGP_CBAJ_T0044066.1 MGP_CBAJ_G0022528.1 mouse_genomes_project 16 45018751 45134046 + MGP_CBAJ_P0044066 Zbtb20 protein_coding protein_coding MGP_CBAJ_T0044067.1 MGP_CBAJ_G0022528.1 mouse_genomes_project 16 45018806 45099523 + Zbtb20 protein_coding processed_transcript MGP_CBAJ_T0044068.1 MGP_CBAJ_G0022528.1 mouse_genomes_project 16 45023226 45089687 + Zbtb20 protein_coding processed_transcript MGP_CBAJ_T0044069.1 MGP_CBAJ_G0022528.1 mouse_genomes_project 16 45099531 45143032 + MGP_CBAJ_P0044069 Zbtb20 protein_coding protein_coding MGP_CBAJ_T0042901.1 MGP_CBAJ_G0022255.1 mouse_genomes_project 16 13683816 13700368 - MGP_CBAJ_P0042901 Mzt2 protein_coding protein_coding MGP_CBAJ_T0042902.1 MGP_CBAJ_G0022255.1 mouse_genomes_project 16 13683818 13699743 - Mzt2 protein_coding retained_intron MGP_CBAJ_T0042903.1 MGP_CBAJ_G0022255.1 mouse_genomes_project 16 13683825 13700390 - MGP_CBAJ_P0042903 Mzt2 protein_coding protein_coding MGP_CBAJ_T0098954.1 MGP_CBAJ_G0037209.1 mouse_genomes_project 16 36820952 36821056 - Gm25465 snRNA snRNA MGP_CBAJ_T0043629.1 MGP_CBAJ_G0022422.1 mouse_genomes_project 16 31276214 31328063 + MGP_CBAJ_P0043629 Bdh1 protein_coding protein_coding MGP_CBAJ_T0043630.1 MGP_CBAJ_G0022422.1 mouse_genomes_project 16 31287378 31329467 + MGP_CBAJ_P0043630 Bdh1 protein_coding protein_coding MGP_CBAJ_T0043631.1 MGP_CBAJ_G0022422.1 mouse_genomes_project 16 31287382 31299515 + Bdh1 protein_coding retained_intron MGP_CBAJ_T0043632.1 MGP_CBAJ_G0022422.1 mouse_genomes_project 16 31287929 31327788 + MGP_CBAJ_P0043632 Bdh1 protein_coding protein_coding MGP_CBAJ_T0043633.1 MGP_CBAJ_G0022422.1 mouse_genomes_project 16 31297606 31327316 + MGP_CBAJ_P0043633 Bdh1 protein_coding protein_coding MGP_CBAJ_T0043634.1 MGP_CBAJ_G0022422.1 mouse_genomes_project 16 31328681 31329467 + Bdh1 protein_coding processed_transcript MGP_CBAJ_T0044444.1 MGP_CBAJ_G0022640.1 mouse_genomes_project 16 66744807 66833025 + MGP_CBAJ_P0044444 Pros1 protein_coding protein_coding MGP_CBAJ_T0044445.1 MGP_CBAJ_G0022640.1 mouse_genomes_project 16 66797339 66799561 + Pros1 protein_coding retained_intron MGP_CBAJ_T0044446.1 MGP_CBAJ_G0022640.1 mouse_genomes_project 16 66825145 66832069 + Pros1 protein_coding processed_transcript MGP_CBAJ_T0044758.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99853665 100002332 + MGP_CBAJ_P0044758 Itsn1 protein_coding protein_coding MGP_CBAJ_T0044759.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99853737 100049407 + MGP_CBAJ_P0044759 Itsn1 protein_coding protein_coding MGP_CBAJ_T0044760.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99853737 100003774 + MGP_CBAJ_P0044760 Itsn1 protein_coding protein_coding MGP_CBAJ_T0044761.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99853737 100056123 + MGP_CBAJ_P0044761 Itsn1 protein_coding protein_coding MGP_CBAJ_T0044762.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99853754 99964463 + MGP_CBAJ_P0044762 Itsn1 protein_coding protein_coding MGP_CBAJ_T0044763.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99853755 100003778 + MGP_CBAJ_P0044763 Itsn1 protein_coding protein_coding MGP_CBAJ_T0044764.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99853757 100003776 + MGP_CBAJ_P0044764 Itsn1 protein_coding protein_coding MGP_CBAJ_T0044765.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99853850 99912728 + Itsn1 protein_coding retained_intron MGP_CBAJ_T0044766.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99853955 99924463 + Itsn1 protein_coding retained_intron MGP_CBAJ_T0044767.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99853976 100002619 + MGP_CBAJ_P0044767 Itsn1 protein_coding protein_coding MGP_CBAJ_T0044768.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99912510 99952001 + MGP_CBAJ_P0044768 Itsn1 protein_coding protein_coding MGP_CBAJ_T0044769.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99914460 99960446 + Itsn1 protein_coding processed_transcript MGP_CBAJ_T0044770.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99938047 99950363 + Itsn1 protein_coding processed_transcript MGP_CBAJ_T0044771.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99938061 99945730 + Itsn1 protein_coding retained_intron MGP_CBAJ_T0044772.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99950271 99960032 + Itsn1 protein_coding processed_transcript MGP_CBAJ_T0044773.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99959670 99960409 + Itsn1 protein_coding retained_intron MGP_CBAJ_T0044774.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99971712 99983299 + Itsn1 protein_coding retained_intron MGP_CBAJ_T0044775.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99971801 99985239 + MGP_CBAJ_P0044775 Itsn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044776.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99974643 99985239 + MGP_CBAJ_P0044776 Itsn1 protein_coding protein_coding MGP_CBAJ_T0044777.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99985789 99995288 + MGP_CBAJ_P0044777 Itsn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044778.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 99994007 100003470 + Itsn1 protein_coding retained_intron MGP_CBAJ_T0044779.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 100009825 100030555 + Itsn1 protein_coding processed_transcript MGP_CBAJ_T0044780.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 100024217 100044573 + MGP_CBAJ_P0044780 Itsn1 protein_coding protein_coding MGP_CBAJ_T0044781.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 100036157 100044596 + MGP_CBAJ_P0044781 Itsn1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044782.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 100036159 100044573 + MGP_CBAJ_P0044782 Itsn1 protein_coding protein_coding MGP_CBAJ_T0044783.1 MGP_CBAJ_G0022750.1 mouse_genomes_project 16 100047308 100050575 + Itsn1 protein_coding processed_transcript MGP_CBAJ_T0043502.1 MGP_CBAJ_G0022383.1 mouse_genomes_project 16 22154761 22162606 - MGP_CBAJ_P0043502 BC106179 protein_coding protein_coding MGP_CBAJ_T0044414.1 MGP_CBAJ_G0022631.1 mouse_genomes_project 16 62691608 62692526 - MGP_CBAJ_P0044414 Olfr209 protein_coding protein_coding MGP_CBAJ_T0043280.1 MGP_CBAJ_G0022337.1 mouse_genomes_project 16 18213552 18223210 - MGP_CBAJ_P0043280 A930003A15Rik protein_coding protein_coding MGP_CBAJ_T0044521.1 MGP_CBAJ_G0022668.1 mouse_genomes_project 16 91815481 91835074 - MGP_CBAJ_P0044521 Mrpl39 protein_coding protein_coding MGP_CBAJ_T0044522.1 MGP_CBAJ_G0022668.1 mouse_genomes_project 16 91833491 91834565 - Mrpl39 protein_coding processed_transcript MGP_CBAJ_T0043347.1 MGP_CBAJ_G0022350.1 mouse_genomes_project 16 19043182 19048500 - MGP_CBAJ_P0043347 Alg3 protein_coding protein_coding MGP_CBAJ_T0043348.1 MGP_CBAJ_G0022350.1 mouse_genomes_project 16 19043195 19048352 - MGP_CBAJ_P0043348 Alg3 protein_coding unknown_likely_coding MGP_CBAJ_T0043349.1 MGP_CBAJ_G0022350.1 mouse_genomes_project 16 19043195 19048470 - MGP_CBAJ_P0043349 Alg3 protein_coding unknown_likely_coding MGP_CBAJ_T0043350.1 MGP_CBAJ_G0022350.1 mouse_genomes_project 16 19043203 19048463 - MGP_CBAJ_P0043350 Alg3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043351.1 MGP_CBAJ_G0022350.1 mouse_genomes_project 16 19043204 19048479 - MGP_CBAJ_P0043351 Alg3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043352.1 MGP_CBAJ_G0022350.1 mouse_genomes_project 16 19046473 19048484 - Alg3 protein_coding processed_transcript MGP_CBAJ_T0042493.1 MGP_CBAJ_G0022153.1 mouse_genomes_project 16 389579 401188 + MGP_CBAJ_P0042493 Zfp174 protein_coding protein_coding MGP_CBAJ_T0043130.1 MGP_CBAJ_G0022297.1 mouse_genomes_project 16 15996742 16000442 + MGP_CBAJ_P0043130 Tssk1 protein_coding protein_coding MGP_CBAJ_T0043545.1 MGP_CBAJ_G0022399.1 mouse_genomes_project 16 26333582 26374849 - MGP_CBAJ_P0043545 Gmnc protein_coding protein_coding MGP_CBAJ_T0043546.1 MGP_CBAJ_G0022399.1 mouse_genomes_project 16 26338460 26347712 - MGP_CBAJ_P0043546 Gmnc protein_coding unknown_likely_coding MGP_CBAJ_T0000939.1 MGP_CBAJ_G0000872.1 mouse_genomes_project 16 83709934 83710842 + TEC TEC MGP_CBAJ_T0044577.1 MGP_CBAJ_G0022682.1 mouse_genomes_project 16 95216851 95254477 + MGP_CBAJ_P0044577 Bach1 protein_coding protein_coding MGP_CBAJ_T0044578.1 MGP_CBAJ_G0022682.1 mouse_genomes_project 16 95216871 95253744 + Bach1 protein_coding processed_transcript MGP_CBAJ_T0044579.1 MGP_CBAJ_G0022682.1 mouse_genomes_project 16 95216910 95244071 + Bach1 protein_coding retained_intron MGP_CBAJ_T0003585.1 MGP_CBAJ_G0003247.1 mouse_genomes_project 16 17339175 17395951 + antisense antisense MGP_CBAJ_T0012979.1 MGP_CBAJ_G0011091.1 mouse_genomes_project 16 20991858 20992253 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0044403.1 MGP_CBAJ_G0022620.1 mouse_genomes_project 16 62264817 62294584 - MGP_CBAJ_P0044403 Olfr190 protein_coding protein_coding MGP_CBAJ_T0044654.1 MGP_CBAJ_G0022729.1 mouse_genomes_project 16 98729856 98797259 - MGP_CBAJ_P0044654 Urb1 protein_coding protein_coding MGP_CBAJ_T0044655.1 MGP_CBAJ_G0022729.1 mouse_genomes_project 16 98752214 98757986 - Urb1 protein_coding retained_intron MGP_CBAJ_T0044656.1 MGP_CBAJ_G0022729.1 mouse_genomes_project 16 98768337 98797259 - Urb1 protein_coding retained_intron MGP_CBAJ_T0044657.1 MGP_CBAJ_G0022729.1 mouse_genomes_project 16 98784096 98797248 - Urb1 protein_coding retained_intron MGP_CBAJ_T0044658.1 MGP_CBAJ_G0022729.1 mouse_genomes_project 16 98788918 98797280 - Urb1 protein_coding retained_intron MGP_CBAJ_T0043434.1 MGP_CBAJ_G0022365.1 mouse_genomes_project 16 20574612 20617300 + MGP_CBAJ_P0043434 Map3k13 protein_coding protein_coding MGP_CBAJ_T0042796.1 MGP_CBAJ_G0022227.1 mouse_genomes_project 16 8718162 9206510 + MGP_CBAJ_P0042796 Snx29 protein_coding protein_coding MGP_CBAJ_T0042797.1 MGP_CBAJ_G0022227.1 mouse_genomes_project 16 8718226 8822321 + MGP_CBAJ_P0042797 Snx29 protein_coding protein_coding MGP_CBAJ_T0042798.1 MGP_CBAJ_G0022227.1 mouse_genomes_project 16 8824132 9206510 + MGP_CBAJ_P0042798 Snx29 protein_coding protein_coding MGP_CBAJ_T0042799.1 MGP_CBAJ_G0022227.1 mouse_genomes_project 16 8825138 9105997 + MGP_CBAJ_P0042799 Snx29 protein_coding protein_coding MGP_CBAJ_T0042800.1 MGP_CBAJ_G0022227.1 mouse_genomes_project 16 8841503 9125390 + MGP_CBAJ_P0042800 Snx29 protein_coding protein_coding MGP_CBAJ_T0042801.1 MGP_CBAJ_G0022227.1 mouse_genomes_project 16 8868138 9074764 + Snx29 protein_coding retained_intron MGP_CBAJ_T0042802.1 MGP_CBAJ_G0022227.1 mouse_genomes_project 16 8870263 9105938 + Snx29 protein_coding retained_intron MGP_CBAJ_T0043038.1 MGP_CBAJ_G0022281.1 mouse_genomes_project 16 15453505 15489564 + MGP_CBAJ_P0043038 Snap29 protein_coding protein_coding MGP_CBAJ_T0012987.1 MGP_CBAJ_G0011099.1 mouse_genomes_project 16 31880687 31881132 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0044175.1 MGP_CBAJ_G0022552.1 mouse_genomes_project 16 47086266 47115085 - MGP_CBAJ_P0044175 Cd200 protein_coding protein_coding MGP_CBAJ_T0044176.1 MGP_CBAJ_G0022552.1 mouse_genomes_project 16 47086314 47114907 - MGP_CBAJ_P0044176 Cd200 protein_coding protein_coding MGP_CBAJ_T0044177.1 MGP_CBAJ_G0022552.1 mouse_genomes_project 16 47087415 47115004 - Cd200 protein_coding processed_transcript MGP_CBAJ_T0044178.1 MGP_CBAJ_G0022552.1 mouse_genomes_project 16 47096362 47106770 - MGP_CBAJ_P0044178 Cd200 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044179.1 MGP_CBAJ_G0022552.1 mouse_genomes_project 16 47096362 47114945 - MGP_CBAJ_P0044179 Cd200 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044180.1 MGP_CBAJ_G0022552.1 mouse_genomes_project 16 47098715 47115055 - Cd200 protein_coding processed_transcript MGP_CBAJ_T0044181.1 MGP_CBAJ_G0022552.1 mouse_genomes_project 16 47098943 47115073 - Cd200 protein_coding processed_transcript MGP_CBAJ_T0044182.1 MGP_CBAJ_G0022552.1 mouse_genomes_project 16 47101048 47115049 - Cd200 protein_coding processed_transcript MGP_CBAJ_T0044183.1 MGP_CBAJ_G0022552.1 mouse_genomes_project 16 47106028 47114896 - Cd200 protein_coding retained_intron MGP_CBAJ_T0044184.1 MGP_CBAJ_G0022552.1 mouse_genomes_project 16 47106750 47115039 - Cd200 protein_coding processed_transcript MGP_CBAJ_T0044185.1 MGP_CBAJ_G0022552.1 mouse_genomes_project 16 47113257 47115050 - Cd200 protein_coding processed_transcript MGP_CBAJ_T0043885.1 MGP_CBAJ_G0022484.1 mouse_genomes_project 16 37029819 37080397 - MGP_CBAJ_P0043885 protein_coding protein_coding MGP_CBAJ_T0043887.1 MGP_CBAJ_G0022484.1 mouse_genomes_project 16 37029822 37080197 - MGP_CBAJ_P0043887 protein_coding nonsense_mediated_decay MGP_CBAJ_T0006733.1 MGP_CBAJ_G0005547.1 mouse_genomes_project 16 15043282 15044874 + 1700056N10Rik lincRNA lincRNA MGP_CBAJ_T0012969.1 MGP_CBAJ_G0011081.1 mouse_genomes_project 16 17200467 17200756 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0043012.1 MGP_CBAJ_G0022278.1 mouse_genomes_project 16 15321880 15324232 + MGP_CBAJ_P0043012 Tmem191c protein_coding protein_coding MGP_CBAJ_T0043013.1 MGP_CBAJ_G0022278.1 mouse_genomes_project 16 15321885 15323747 + MGP_CBAJ_P0043013 Tmem191c protein_coding protein_coding MGP_CBAJ_T0043014.1 MGP_CBAJ_G0022278.1 mouse_genomes_project 16 15321899 15323051 + Tmem191c protein_coding processed_transcript MGP_CBAJ_T0043015.1 MGP_CBAJ_G0022278.1 mouse_genomes_project 16 15321913 15322668 + Tmem191c protein_coding retained_intron MGP_CBAJ_T0043016.1 MGP_CBAJ_G0022278.1 mouse_genomes_project 16 15321913 15324228 + MGP_CBAJ_P0043016 Tmem191c protein_coding protein_coding MGP_CBAJ_T0043017.1 MGP_CBAJ_G0022278.1 mouse_genomes_project 16 15321919 15322973 + Tmem191c protein_coding processed_transcript MGP_CBAJ_T0043018.1 MGP_CBAJ_G0022278.1 mouse_genomes_project 16 15322005 15323308 + MGP_CBAJ_P0043018 Tmem191c protein_coding protein_coding MGP_CBAJ_T0043019.1 MGP_CBAJ_G0022278.1 mouse_genomes_project 16 15322248 15324232 + MGP_CBAJ_P0043019 Tmem191c protein_coding protein_coding MGP_CBAJ_T0043020.1 MGP_CBAJ_G0022278.1 mouse_genomes_project 16 15322431 15323776 + MGP_CBAJ_P0043020 Tmem191c protein_coding protein_coding MGP_CBAJ_T0043021.1 MGP_CBAJ_G0022278.1 mouse_genomes_project 16 15322652 15323624 + Tmem191c protein_coding retained_intron MGP_CBAJ_T0043022.1 MGP_CBAJ_G0022278.1 mouse_genomes_project 16 15322666 15323737 + Tmem191c protein_coding retained_intron MGP_CBAJ_T0043023.1 MGP_CBAJ_G0022278.1 mouse_genomes_project 16 15323171 15328795 + Tmem191c protein_coding retained_intron MGP_CBAJ_T0042568.1 MGP_CBAJ_G0022167.1 mouse_genomes_project 16 1176552 1191305 - MGP_CBAJ_P0042568 Tfap4 protein_coding protein_coding MGP_CBAJ_T0100205.1 MGP_CBAJ_G0038460.1 mouse_genomes_project 16 31636855 31636998 - Gm24879 snoRNA snoRNA MGP_CBAJ_T0011279.1 MGP_CBAJ_G0009417.1 mouse_genomes_project 16 5449887 5450176 - Gm25782 misc_RNA misc_RNA MGP_CBAJ_T0043436.1 MGP_CBAJ_G0022367.1 mouse_genomes_project 16 20633997 20704574 - MGP_CBAJ_P0043436 Liph protein_coding protein_coding MGP_CBAJ_T0043437.1 MGP_CBAJ_G0022367.1 mouse_genomes_project 16 20633997 20704574 - MGP_CBAJ_P0043437 Liph protein_coding protein_coding MGP_CBAJ_T0044799.1 MGP_CBAJ_G0022756.1 mouse_genomes_project 16 100562388 100577243 - MGP_CBAJ_P0044799 Kcne1 protein_coding protein_coding MGP_CBAJ_T0044800.1 MGP_CBAJ_G0022756.1 mouse_genomes_project 16 100566188 100576649 - MGP_CBAJ_P0044800 Kcne1 protein_coding protein_coding MGP_CBAJ_T0043226.1 MGP_CBAJ_G0022315.1 mouse_genomes_project 16 16727553 16730311 + MGP_CBAJ_P0043226 Gm16314 protein_coding protein_coding MGP_CBAJ_T0044385.1 MGP_CBAJ_G0022612.1 mouse_genomes_project 16 62025966 62029012 - MGP_CBAJ_P0044385 Olfr175-ps1 protein_coding protein_coding MGP_CBAJ_T0044737.1 MGP_CBAJ_G0022747.1 mouse_genomes_project 16 99790135 99797093 - MGP_CBAJ_P0044737 Donson protein_coding protein_coding MGP_CBAJ_T0044738.1 MGP_CBAJ_G0022747.1 mouse_genomes_project 16 99792131 99801430 - Donson protein_coding retained_intron MGP_CBAJ_T0044739.1 MGP_CBAJ_G0022747.1 mouse_genomes_project 16 99792131 99801430 - MGP_CBAJ_P0044739 Donson protein_coding protein_coding MGP_CBAJ_T0044740.1 MGP_CBAJ_G0022747.1 mouse_genomes_project 16 99792131 99801430 - MGP_CBAJ_P0044740 Donson protein_coding nonsense_mediated_decay MGP_CBAJ_T0044741.1 MGP_CBAJ_G0022747.1 mouse_genomes_project 16 99792388 99800534 - MGP_CBAJ_P0044741 Donson protein_coding nonsense_mediated_decay MGP_CBAJ_T0044742.1 MGP_CBAJ_G0022747.1 mouse_genomes_project 16 99792388 99801382 - MGP_CBAJ_P0044742 Donson protein_coding nonsense_mediated_decay MGP_CBAJ_T0044743.1 MGP_CBAJ_G0022747.1 mouse_genomes_project 16 99792388 99800534 - MGP_CBAJ_P0044743 Donson protein_coding nonsense_mediated_decay MGP_CBAJ_T0044744.1 MGP_CBAJ_G0022747.1 mouse_genomes_project 16 99792694 99801368 - MGP_CBAJ_P0044744 Donson protein_coding protein_coding MGP_CBAJ_T0044745.1 MGP_CBAJ_G0022747.1 mouse_genomes_project 16 99792755 99801377 - MGP_CBAJ_P0044745 Donson protein_coding protein_coding MGP_CBAJ_T0042943.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14845677 14867367 + MGP_CBAJ_P0042943 Top3b protein_coding protein_coding MGP_CBAJ_T0042944.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14845698 14874503 + MGP_CBAJ_P0042944 Top3b protein_coding protein_coding MGP_CBAJ_T0042945.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14845708 14860850 + MGP_CBAJ_P0042945 Top3b protein_coding protein_coding MGP_CBAJ_T0042946.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14845715 14865051 + MGP_CBAJ_P0042946 Top3b protein_coding protein_coding MGP_CBAJ_T0042947.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14845722 14874508 + MGP_CBAJ_P0042947 Top3b protein_coding protein_coding MGP_CBAJ_T0042948.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14845727 14866984 + Top3b protein_coding retained_intron MGP_CBAJ_T0042949.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14845728 14862174 + MGP_CBAJ_P0042949 Top3b protein_coding protein_coding MGP_CBAJ_T0042950.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14845741 14860865 + Top3b protein_coding retained_intron MGP_CBAJ_T0042951.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14845748 14860577 + MGP_CBAJ_P0042951 Top3b protein_coding protein_coding MGP_CBAJ_T0042952.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14845758 14874508 + Top3b protein_coding retained_intron MGP_CBAJ_T0042953.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14845781 14860512 + MGP_CBAJ_P0042953 Top3b protein_coding protein_coding MGP_CBAJ_T0042954.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14845906 14860992 + Top3b protein_coding retained_intron MGP_CBAJ_T0042955.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14864966 14874491 + MGP_CBAJ_P0042955 Top3b protein_coding protein_coding MGP_CBAJ_T0042956.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14865736 14874508 + Top3b protein_coding retained_intron MGP_CBAJ_T0042957.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14867043 14868224 + Top3b protein_coding retained_intron MGP_CBAJ_T0042958.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14868161 14869228 + Top3b protein_coding retained_intron MGP_CBAJ_T0042959.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14868427 14869405 + Top3b protein_coding retained_intron MGP_CBAJ_T0042960.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14869356 14874493 + Top3b protein_coding retained_intron MGP_CBAJ_T0042961.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14871743 14874018 + MGP_CBAJ_P0042961 Top3b protein_coding protein_coding MGP_CBAJ_T0042962.1 MGP_CBAJ_G0022266.1 mouse_genomes_project 16 14873019 14873937 + Top3b protein_coding retained_intron MGP_CBAJ_T0100231.1 MGP_CBAJ_G0038486.1 mouse_genomes_project 16 84352040 84352171 + Gm25916 snoRNA snoRNA MGP_CBAJ_T0043888.1 MGP_CBAJ_G0022486.1 mouse_genomes_project 16 37127888 37134919 - MGP_CBAJ_P0043888 2010005H15Rik protein_coding protein_coding MGP_CBAJ_T0043889.1 MGP_CBAJ_G0022486.1 mouse_genomes_project 16 37127943 37134887 - MGP_CBAJ_P0043889 2010005H15Rik protein_coding protein_coding MGP_CBAJ_T0010027.1 MGP_CBAJ_G0008165.1 mouse_genomes_project 16 58984476 58984580 + Gm24047 miRNA miRNA MGP_CBAJ_T0098971.1 MGP_CBAJ_G0037226.1 mouse_genomes_project 16 67801360 67801458 - Gm22769 snRNA snRNA MGP_CBAJ_T0044229.1 MGP_CBAJ_G0022564.1 mouse_genomes_project 16 49980091 49980952 + MGP_CBAJ_P0044229 protein_coding protein_coding MGP_CBAJ_T0100221.1 MGP_CBAJ_G0038476.1 mouse_genomes_project 16 58947472 58947607 - Gm22422 snoRNA snoRNA MGP_CBAJ_T0043772.1 MGP_CBAJ_G0022453.1 mouse_genomes_project 16 33156547 33160272 + MGP_CBAJ_P0043772 Rpl35a protein_coding protein_coding MGP_CBAJ_T0043773.1 MGP_CBAJ_G0022453.1 mouse_genomes_project 16 33156560 33160259 + MGP_CBAJ_P0043773 Rpl35a protein_coding protein_coding MGP_CBAJ_T0043774.1 MGP_CBAJ_G0022453.1 mouse_genomes_project 16 33156576 33160258 + Rpl35a protein_coding retained_intron MGP_CBAJ_T0043775.1 MGP_CBAJ_G0022453.1 mouse_genomes_project 16 33156618 33157625 + Rpl35a protein_coding retained_intron MGP_CBAJ_T0043776.1 MGP_CBAJ_G0022453.1 mouse_genomes_project 16 33156621 33160248 + MGP_CBAJ_P0043776 Rpl35a protein_coding protein_coding MGP_CBAJ_T0043777.1 MGP_CBAJ_G0022453.1 mouse_genomes_project 16 33156900 33160258 + MGP_CBAJ_P0043777 Rpl35a protein_coding protein_coding MGP_CBAJ_T0043778.1 MGP_CBAJ_G0022453.1 mouse_genomes_project 16 33157112 33160239 + MGP_CBAJ_P0043778 Rpl35a protein_coding protein_coding MGP_CBAJ_T0044553.1 MGP_CBAJ_G0022677.1 mouse_genomes_project 16 94851898 94916425 - MGP_CBAJ_P0044553 Ltn1 protein_coding protein_coding MGP_CBAJ_T0097782.1 MGP_CBAJ_G0036055.1 mouse_genomes_project 16 62440064 62440994 - pseudogene pseudogene MGP_CBAJ_T0043353.1 MGP_CBAJ_G0022351.1 mouse_genomes_project 16 19049324 19060145 + MGP_CBAJ_P0043353 Ece2 protein_coding protein_coding MGP_CBAJ_T0043354.1 MGP_CBAJ_G0022351.1 mouse_genomes_project 16 19049332 19060007 + MGP_CBAJ_P0043354 Ece2 protein_coding protein_coding MGP_CBAJ_T0043355.1 MGP_CBAJ_G0022351.1 mouse_genomes_project 16 19049332 19087326 + MGP_CBAJ_P0043355 Ece2 protein_coding protein_coding MGP_CBAJ_T0043356.1 MGP_CBAJ_G0022351.1 mouse_genomes_project 16 19049341 19087331 + MGP_CBAJ_P0043356 Ece2 protein_coding protein_coding MGP_CBAJ_T0043357.1 MGP_CBAJ_G0022351.1 mouse_genomes_project 16 19049525 19087326 + MGP_CBAJ_P0043357 Ece2 protein_coding protein_coding MGP_CBAJ_T0043359.1 MGP_CBAJ_G0022351.1 mouse_genomes_project 16 19070807 19087326 + MGP_CBAJ_P0043359 Ece2 protein_coding protein_coding MGP_CBAJ_T0043360.1 MGP_CBAJ_G0022351.1 mouse_genomes_project 16 19070824 19084445 + Ece2 protein_coding retained_intron MGP_CBAJ_T0043361.1 MGP_CBAJ_G0022351.1 mouse_genomes_project 16 19070824 19087887 + MGP_CBAJ_P0043361 Ece2 protein_coding protein_coding MGP_CBAJ_T0043362.1 MGP_CBAJ_G0022351.1 mouse_genomes_project 16 19070830 19087326 + MGP_CBAJ_P0043362 Ece2 protein_coding protein_coding MGP_CBAJ_T0043363.1 MGP_CBAJ_G0022351.1 mouse_genomes_project 16 19072124 19079368 + Ece2 protein_coding retained_intron MGP_CBAJ_T0043364.1 MGP_CBAJ_G0022351.1 mouse_genomes_project 16 19073849 19087896 + MGP_CBAJ_P0043364 Ece2 protein_coding protein_coding MGP_CBAJ_T0098940.1 MGP_CBAJ_G0037195.1 mouse_genomes_project 16 15388493 15388600 - Gm24927 snRNA snRNA MGP_CBAJ_T0043232.1 MGP_CBAJ_G0022318.1 mouse_genomes_project 16 16874378 16882488 - MGP_CBAJ_P0043232 Sept5 protein_coding protein_coding MGP_CBAJ_T0003614.1 MGP_CBAJ_G0003269.1 mouse_genomes_project 16 58880578 58881941 - Zbtb11os1 antisense antisense MGP_CBAJ_T0043394.1 MGP_CBAJ_G0022355.1 mouse_genomes_project 16 19144824 19150826 + MGP_CBAJ_P0043394 Fam131a protein_coding protein_coding MGP_CBAJ_T0043395.1 MGP_CBAJ_G0022355.1 mouse_genomes_project 16 19146450 19156688 + MGP_CBAJ_P0043395 Fam131a protein_coding protein_coding MGP_CBAJ_T0043396.1 MGP_CBAJ_G0022355.1 mouse_genomes_project 16 19146659 19156625 + MGP_CBAJ_P0043396 Fam131a protein_coding protein_coding MGP_CBAJ_T0043397.1 MGP_CBAJ_G0022355.1 mouse_genomes_project 16 19147717 19155299 + MGP_CBAJ_P0043397 Fam131a protein_coding protein_coding MGP_CBAJ_T0006766.1 MGP_CBAJ_G0005573.1 mouse_genomes_project 16 60347599 60348210 + Gm26800 lincRNA lincRNA MGP_CBAJ_T0006767.1 MGP_CBAJ_G0005574.1 mouse_genomes_project 16 62817058 62825365 - 1700022E09Rik lincRNA lincRNA MGP_CBAJ_T0006768.1 MGP_CBAJ_G0005574.1 mouse_genomes_project 16 62821029 62825399 - 1700022E09Rik lincRNA lincRNA MGP_CBAJ_T0097784.1 MGP_CBAJ_G0036057.1 mouse_genomes_project 16 96635934 96636170 - pseudogene pseudogene MGP_CBAJ_T0013030.1 MGP_CBAJ_G0011142.1 mouse_genomes_project 16 103193049 103193260 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013027.1 MGP_CBAJ_G0011139.1 mouse_genomes_project 16 98925206 98925758 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0044979.1 MGP_CBAJ_G0022787.1 mouse_genomes_project 16 105314315 105377434 + MGP_CBAJ_P0044979 Pcp4 protein_coding protein_coding MGP_CBAJ_T0012971.1 MGP_CBAJ_G0011083.1 mouse_genomes_project 16 17300292 17300940 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0043583.1 MGP_CBAJ_G0022409.1 mouse_genomes_project 16 29623575 29627390 - MGP_CBAJ_P0043583 Gm1968 protein_coding protein_coding MGP_CBAJ_T0043676.1 MGP_CBAJ_G0022432.1 mouse_genomes_project 16 32081048 32100665 - MGP_CBAJ_P0043676 Nrros protein_coding protein_coding MGP_CBAJ_T0043677.1 MGP_CBAJ_G0022432.1 mouse_genomes_project 16 32081058 32100637 - MGP_CBAJ_P0043677 Nrros protein_coding protein_coding MGP_CBAJ_T0043678.1 MGP_CBAJ_G0022432.1 mouse_genomes_project 16 32081058 32086157 - MGP_CBAJ_P0043678 Nrros protein_coding protein_coding MGP_CBAJ_T0043679.1 MGP_CBAJ_G0022432.1 mouse_genomes_project 16 32081088 32100556 - MGP_CBAJ_P0043679 Nrros protein_coding protein_coding MGP_CBAJ_T0043680.1 MGP_CBAJ_G0022432.1 mouse_genomes_project 16 32081088 32100574 - MGP_CBAJ_P0043680 Nrros protein_coding protein_coding MGP_CBAJ_T0043681.1 MGP_CBAJ_G0022432.1 mouse_genomes_project 16 32082945 32100674 - MGP_CBAJ_P0043681 Nrros protein_coding protein_coding MGP_CBAJ_T0043682.1 MGP_CBAJ_G0022432.1 mouse_genomes_project 16 32083078 32100556 - Nrros protein_coding processed_transcript MGP_CBAJ_T0043683.1 MGP_CBAJ_G0022432.1 mouse_genomes_project 16 32083090 32086350 - Nrros protein_coding processed_transcript MGP_CBAJ_T0043684.1 MGP_CBAJ_G0022432.1 mouse_genomes_project 16 32083137 32100562 - MGP_CBAJ_P0043684 Nrros protein_coding protein_coding MGP_CBAJ_T0044388.1 MGP_CBAJ_G0022614.1 mouse_genomes_project 16 62071617 62072553 - MGP_CBAJ_P0044388 protein_coding protein_coding MGP_CBAJ_T0044389.1 MGP_CBAJ_G0022614.1 mouse_genomes_project 16 62071617 62074672 - MGP_CBAJ_P0044389 protein_coding protein_coding MGP_CBAJ_T0044259.1 MGP_CBAJ_G0022577.1 mouse_genomes_project 16 51955996 52020363 + MGP_CBAJ_P0044259 Cd47 protein_coding protein_coding MGP_CBAJ_T0044260.1 MGP_CBAJ_G0022577.1 mouse_genomes_project 16 51956165 52020372 + MGP_CBAJ_P0044260 Cd47 protein_coding unknown_likely_coding MGP_CBAJ_T0044261.1 MGP_CBAJ_G0022577.1 mouse_genomes_project 16 51968316 52016426 + MGP_CBAJ_P0044261 Cd47 protein_coding protein_coding MGP_CBAJ_T0000037.1 MGP_CBAJ_G0000029.1 mouse_genomes_project 16 17353908 17353946 - MGP_CBAJ_P0000037 Iglj1 IG_J_gene IG_J_gene MGP_CBAJ_T0043064.1 MGP_CBAJ_G0022286.1 mouse_genomes_project 16 15610114 15626721 - MGP_CBAJ_P0043064 Lrrc74b protein_coding protein_coding MGP_CBAJ_T0043065.1 MGP_CBAJ_G0022286.1 mouse_genomes_project 16 15610114 15626721 - MGP_CBAJ_P0043065 Lrrc74b protein_coding protein_coding MGP_CBAJ_T0043066.1 MGP_CBAJ_G0022286.1 mouse_genomes_project 16 15611079 15619906 - Lrrc74b protein_coding processed_transcript MGP_CBAJ_T0043067.1 MGP_CBAJ_G0022286.1 mouse_genomes_project 16 15614284 15626718 - MGP_CBAJ_P0043067 Lrrc74b protein_coding protein_coding MGP_CBAJ_T0042904.1 MGP_CBAJ_G0022256.1 mouse_genomes_project 16 13732526 14025780 - MGP_CBAJ_P0042904 Spidr protein_coding protein_coding MGP_CBAJ_T0042905.1 MGP_CBAJ_G0022256.1 mouse_genomes_project 16 13732929 13831446 - MGP_CBAJ_P0042905 Spidr protein_coding unknown_likely_coding MGP_CBAJ_T0044619.1 MGP_CBAJ_G0022714.1 mouse_genomes_project 16 96873520 96873917 + MGP_CBAJ_P0044619 Gm9789 protein_coding protein_coding MGP_CBAJ_T0044821.1 MGP_CBAJ_G0022763.1 mouse_genomes_project 16 102160755 102275859 + MGP_CBAJ_P0044821 Dopey2 protein_coding protein_coding MGP_CBAJ_T0044822.1 MGP_CBAJ_G0022763.1 mouse_genomes_project 16 102160889 102275862 + MGP_CBAJ_P0044822 Dopey2 protein_coding unknown_likely_coding MGP_CBAJ_T0043285.1 MGP_CBAJ_G0022339.1 mouse_genomes_project 16 18439169 18472841 + MGP_CBAJ_P0043285 Klhl24 protein_coding protein_coding MGP_CBAJ_T0098974.1 MGP_CBAJ_G0037229.1 mouse_genomes_project 16 84782060 84782167 + Gm24861 snRNA snRNA MGP_CBAJ_T0044475.1 MGP_CBAJ_G0022652.1 mouse_genomes_project 16 78056969 78495283 + MGP_CBAJ_P0044475 Robo1 protein_coding protein_coding MGP_CBAJ_T0010006.1 MGP_CBAJ_G0008144.1 mouse_genomes_project 16 19872103 19872157 - Mir7680 miRNA miRNA MGP_CBAJ_T0044549.1 MGP_CBAJ_G0022675.1 mouse_genomes_project 16 93111065 93160708 - MGP_CBAJ_P0044549 Adamts5 protein_coding protein_coding MGP_CBAJ_T0044016.1 MGP_CBAJ_G0022520.1 mouse_genomes_project 16 39599923 39642797 + MGP_CBAJ_P0044016 Tmem39a protein_coding protein_coding MGP_CBAJ_T0044017.1 MGP_CBAJ_G0022520.1 mouse_genomes_project 16 39604036 39643769 + MGP_CBAJ_P0044017 Tmem39a protein_coding protein_coding MGP_CBAJ_T0044018.1 MGP_CBAJ_G0022520.1 mouse_genomes_project 16 39604036 39643769 + MGP_CBAJ_P0044018 Tmem39a protein_coding protein_coding MGP_CBAJ_T0044019.1 MGP_CBAJ_G0022520.1 mouse_genomes_project 16 39604085 39635938 + MGP_CBAJ_P0044019 Tmem39a protein_coding protein_coding MGP_CBAJ_T0044020.1 MGP_CBAJ_G0022520.1 mouse_genomes_project 16 39604110 39622867 + Tmem39a protein_coding processed_transcript MGP_CBAJ_T0044021.1 MGP_CBAJ_G0022520.1 mouse_genomes_project 16 39605413 39631681 + MGP_CBAJ_P0044021 Tmem39a protein_coding nonsense_mediated_decay MGP_CBAJ_T0044022.1 MGP_CBAJ_G0022520.1 mouse_genomes_project 16 39625118 39635106 + Tmem39a protein_coding retained_intron MGP_CBAJ_T0044023.1 MGP_CBAJ_G0022520.1 mouse_genomes_project 16 39625441 39643049 + MGP_CBAJ_P0044023 Tmem39a protein_coding protein_coding MGP_CBAJ_T0044024.1 MGP_CBAJ_G0022520.1 mouse_genomes_project 16 39631789 39642549 + MGP_CBAJ_P0044024 Tmem39a protein_coding protein_coding MGP_CBAJ_T0044025.1 MGP_CBAJ_G0022520.1 mouse_genomes_project 16 39635096 39636571 + Tmem39a protein_coding retained_intron MGP_CBAJ_T0044026.1 MGP_CBAJ_G0022520.1 mouse_genomes_project 16 39635173 39636320 + Tmem39a protein_coding retained_intron MGP_CBAJ_T0044027.1 MGP_CBAJ_G0022520.1 mouse_genomes_project 16 39635188 39642752 + MGP_CBAJ_P0044027 Tmem39a protein_coding protein_coding MGP_CBAJ_T0044028.1 MGP_CBAJ_G0022520.1 mouse_genomes_project 16 39636891 39642953 + Tmem39a protein_coding processed_transcript MGP_CBAJ_T0044029.1 MGP_CBAJ_G0022520.1 mouse_genomes_project 16 39637719 39642913 + Tmem39a protein_coding retained_intron MGP_CBAJ_T0013016.1 MGP_CBAJ_G0011128.1 mouse_genomes_project 16 65190367 65190878 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0044538.1 MGP_CBAJ_G0022671.1 mouse_genomes_project 16 91949467 91975775 + MGP_CBAJ_P0044538 Gabpa protein_coding protein_coding MGP_CBAJ_T0044539.1 MGP_CBAJ_G0022671.1 mouse_genomes_project 16 91949666 91983148 + MGP_CBAJ_P0044539 Gabpa protein_coding protein_coding MGP_CBAJ_T0044540.1 MGP_CBAJ_G0022671.1 mouse_genomes_project 16 91967014 91974889 + Gabpa protein_coding processed_transcript MGP_CBAJ_T0044541.1 MGP_CBAJ_G0022671.1 mouse_genomes_project 16 91970496 91972035 + Gabpa protein_coding retained_intron MGP_CBAJ_T0044542.1 MGP_CBAJ_G0022671.1 mouse_genomes_project 16 91974504 91976926 + Gabpa protein_coding processed_transcript MGP_CBAJ_T0100203.1 MGP_CBAJ_G0038458.1 mouse_genomes_project 16 24018469 24018603 + Gm22672 snoRNA snoRNA MGP_CBAJ_T0043549.1 MGP_CBAJ_G0022402.1 mouse_genomes_project 16 26822095 26877610 + MGP_CBAJ_P0043549 Ccdc50 protein_coding protein_coding MGP_CBAJ_T0043550.1 MGP_CBAJ_G0022402.1 mouse_genomes_project 16 26822206 26871805 + MGP_CBAJ_P0043550 Ccdc50 protein_coding protein_coding MGP_CBAJ_T0043551.1 MGP_CBAJ_G0022402.1 mouse_genomes_project 16 26822206 26865112 + MGP_CBAJ_P0043551 Ccdc50 protein_coding protein_coding MGP_CBAJ_T0043552.1 MGP_CBAJ_G0022402.1 mouse_genomes_project 16 26823162 26863792 + MGP_CBAJ_P0043552 Ccdc50 protein_coding protein_coding MGP_CBAJ_T0043553.1 MGP_CBAJ_G0022402.1 mouse_genomes_project 16 26823194 26824317 + Ccdc50 protein_coding processed_transcript MGP_CBAJ_T0043197.1 MGP_CBAJ_G0022312.1 mouse_genomes_project 16 16618473 16624852 - MGP_CBAJ_P0043197 Comt protein_coding protein_coding MGP_CBAJ_T0043198.1 MGP_CBAJ_G0022312.1 mouse_genomes_project 16 16618893 16643016 - MGP_CBAJ_P0043198 Comt protein_coding protein_coding MGP_CBAJ_T0043199.1 MGP_CBAJ_G0022312.1 mouse_genomes_project 16 16618901 16642549 - MGP_CBAJ_P0043199 Comt protein_coding protein_coding MGP_CBAJ_T0043200.1 MGP_CBAJ_G0022312.1 mouse_genomes_project 16 16622120 16624852 - MGP_CBAJ_P0043200 Comt protein_coding protein_coding MGP_CBAJ_T0000924.1 MGP_CBAJ_G0000858.1 mouse_genomes_project 16 61027204 61027614 + TEC TEC MGP_CBAJ_T0017245.1 MGP_CBAJ_G0015062.1 mouse_genomes_project 16 61553306 61556695 - 4930461C15Rik processed_transcript processed_transcript MGP_CBAJ_T0042980.1 MGP_CBAJ_G0022270.1 mouse_genomes_project 16 15093815 15118401 - MGP_CBAJ_P0042980 Ppil2 protein_coding protein_coding MGP_CBAJ_T0042981.1 MGP_CBAJ_G0022270.1 mouse_genomes_project 16 15093815 15118406 - MGP_CBAJ_P0042981 Ppil2 protein_coding protein_coding MGP_CBAJ_T0042982.1 MGP_CBAJ_G0022270.1 mouse_genomes_project 16 15094576 15118391 - MGP_CBAJ_P0042982 Ppil2 protein_coding protein_coding MGP_CBAJ_T0042983.1 MGP_CBAJ_G0022270.1 mouse_genomes_project 16 15095866 15096720 - Ppil2 protein_coding retained_intron MGP_CBAJ_T0042984.1 MGP_CBAJ_G0022270.1 mouse_genomes_project 16 15097362 15098778 - Ppil2 protein_coding retained_intron MGP_CBAJ_T0042985.1 MGP_CBAJ_G0022270.1 mouse_genomes_project 16 15100107 15110878 - Ppil2 protein_coding retained_intron MGP_CBAJ_T0042986.1 MGP_CBAJ_G0022270.1 mouse_genomes_project 16 15102181 15104405 - Ppil2 protein_coding retained_intron MGP_CBAJ_T0042987.1 MGP_CBAJ_G0022270.1 mouse_genomes_project 16 15103021 15118364 - MGP_CBAJ_P0042987 Ppil2 protein_coding protein_coding MGP_CBAJ_T0042988.1 MGP_CBAJ_G0022270.1 mouse_genomes_project 16 15103964 15118385 - Ppil2 protein_coding processed_transcript MGP_CBAJ_T0042989.1 MGP_CBAJ_G0022270.1 mouse_genomes_project 16 15104269 15118362 - Ppil2 protein_coding retained_intron MGP_CBAJ_T0042990.1 MGP_CBAJ_G0022270.1 mouse_genomes_project 16 15114368 15118385 - Ppil2 protein_coding processed_transcript MGP_CBAJ_T0042991.1 MGP_CBAJ_G0022270.1 mouse_genomes_project 16 15115998 15118381 - Ppil2 protein_coding retained_intron MGP_CBAJ_T0043597.1 MGP_CBAJ_G0022415.1 mouse_genomes_project 16 30263225 30306780 - MGP_CBAJ_P0043597 Tmem44 protein_coding unknown_likely_coding MGP_CBAJ_T0043598.1 MGP_CBAJ_G0022415.1 mouse_genomes_project 16 30263232 30306424 - Tmem44 protein_coding retained_intron MGP_CBAJ_T0043599.1 MGP_CBAJ_G0022415.1 mouse_genomes_project 16 30263232 30307048 - MGP_CBAJ_P0043599 Tmem44 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043600.1 MGP_CBAJ_G0022415.1 mouse_genomes_project 16 30265068 30307056 - MGP_CBAJ_P0043600 Tmem44 protein_coding protein_coding MGP_CBAJ_T0043601.1 MGP_CBAJ_G0022415.1 mouse_genomes_project 16 30265070 30307056 - MGP_CBAJ_P0043601 Tmem44 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043602.1 MGP_CBAJ_G0022415.1 mouse_genomes_project 16 30265347 30295048 - MGP_CBAJ_P0043602 Tmem44 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043603.1 MGP_CBAJ_G0022415.1 mouse_genomes_project 16 30271546 30307017 - Tmem44 protein_coding retained_intron MGP_CBAJ_T0043604.1 MGP_CBAJ_G0022415.1 mouse_genomes_project 16 30271927 30307320 - Tmem44 protein_coding retained_intron MGP_CBAJ_T0043605.1 MGP_CBAJ_G0022415.1 mouse_genomes_project 16 30297851 30307006 - Tmem44 protein_coding processed_transcript MGP_CBAJ_T0042709.1 MGP_CBAJ_G0022204.1 mouse_genomes_project 16 7376707 7381114 + MGP_CBAJ_P0042709 Rpl39l protein_coding protein_coding MGP_CBAJ_T0042710.1 MGP_CBAJ_G0022204.1 mouse_genomes_project 16 7376709 7381395 + MGP_CBAJ_P0042710 Rpl39l protein_coding protein_coding MGP_CBAJ_T0044038.1 MGP_CBAJ_G0022524.1 mouse_genomes_project 16 39891581 39911336 - MGP_CBAJ_P0044038 4930435E12Rik protein_coding protein_coding MGP_CBAJ_T0044039.1 MGP_CBAJ_G0022524.1 mouse_genomes_project 16 39906926 39911318 - 4930435E12Rik protein_coding retained_intron MGP_CBAJ_T0003608.1 MGP_CBAJ_G0003265.1 mouse_genomes_project 16 47452080 47455149 + antisense antisense MGP_CBAJ_T0100198.1 MGP_CBAJ_G0038453.1 mouse_genomes_project 16 22023775 22023844 + Snord2 snoRNA snoRNA MGP_CBAJ_T0043947.1 MGP_CBAJ_G0022499.1 mouse_genomes_project 16 37857505 37949172 + MGP_CBAJ_P0043947 Polq protein_coding nonsense_mediated_decay MGP_CBAJ_T0043948.1 MGP_CBAJ_G0022499.1 mouse_genomes_project 16 37857505 37949577 + MGP_CBAJ_P0043948 Polq protein_coding nonsense_mediated_decay MGP_CBAJ_T0043949.1 MGP_CBAJ_G0022499.1 mouse_genomes_project 16 37857505 37949172 + MGP_CBAJ_P0043949 Polq protein_coding protein_coding MGP_CBAJ_T0043950.1 MGP_CBAJ_G0022499.1 mouse_genomes_project 16 37857505 37949597 + MGP_CBAJ_P0043950 Polq protein_coding protein_coding MGP_CBAJ_T0043951.1 MGP_CBAJ_G0022499.1 mouse_genomes_project 16 37857534 37863338 + Polq protein_coding retained_intron MGP_CBAJ_T0043952.1 MGP_CBAJ_G0022499.1 mouse_genomes_project 16 37886667 37912910 + Polq protein_coding retained_intron MGP_CBAJ_T0043953.1 MGP_CBAJ_G0022499.1 mouse_genomes_project 16 37940095 37949597 + Polq protein_coding retained_intron MGP_CBAJ_T0044001.1 MGP_CBAJ_G0022514.1 mouse_genomes_project 16 39387623 39403131 + MGP_CBAJ_P0044001 Popdc2 protein_coding protein_coding MGP_CBAJ_T0044002.1 MGP_CBAJ_G0022514.1 mouse_genomes_project 16 39387659 39403131 + MGP_CBAJ_P0044002 Popdc2 protein_coding protein_coding MGP_CBAJ_T0044003.1 MGP_CBAJ_G0022514.1 mouse_genomes_project 16 39393704 39399105 + Popdc2 protein_coding processed_transcript MGP_CBAJ_T0044004.1 MGP_CBAJ_G0022514.1 mouse_genomes_project 16 39394311 39402678 + Popdc2 protein_coding processed_transcript MGP_CBAJ_T0044005.1 MGP_CBAJ_G0022514.1 mouse_genomes_project 16 39396883 39399048 + Popdc2 protein_coding processed_transcript MGP_CBAJ_T0044186.1 MGP_CBAJ_G0022553.1 mouse_genomes_project 16 47117767 47171319 - Gm609 protein_coding processed_transcript MGP_CBAJ_T0044187.1 MGP_CBAJ_G0022553.1 mouse_genomes_project 16 47125537 47194147 - MGP_CBAJ_P0044187 Gm609 protein_coding protein_coding MGP_CBAJ_T0044130.1 MGP_CBAJ_G0022541.1 mouse_genomes_project 16 46101475 46179150 - MGP_CBAJ_P0044130 Boc protein_coding protein_coding MGP_CBAJ_T0044131.1 MGP_CBAJ_G0022541.1 mouse_genomes_project 16 46101479 46179177 - MGP_CBAJ_P0044131 Boc protein_coding protein_coding MGP_CBAJ_T0044132.1 MGP_CBAJ_G0022541.1 mouse_genomes_project 16 46101482 46141710 - MGP_CBAJ_P0044132 Boc protein_coding unknown_likely_coding MGP_CBAJ_T0042909.1 MGP_CBAJ_G0022258.1 mouse_genomes_project 16 14207773 14215860 + MGP_CBAJ_P0042909 Yars2 protein_coding protein_coding MGP_CBAJ_T0042910.1 MGP_CBAJ_G0022258.1 mouse_genomes_project 16 14207782 14214441 + Yars2 protein_coding retained_intron MGP_CBAJ_T0042911.1 MGP_CBAJ_G0022258.1 mouse_genomes_project 16 14207786 14216558 + MGP_CBAJ_P0042911 Yars2 protein_coding protein_coding MGP_CBAJ_T0042912.1 MGP_CBAJ_G0022258.1 mouse_genomes_project 16 14207789 14216550 + MGP_CBAJ_P0042912 Yars2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042913.1 MGP_CBAJ_G0022258.1 mouse_genomes_project 16 14208361 14214159 + Yars2 protein_coding processed_transcript MGP_CBAJ_T0042914.1 MGP_CBAJ_G0022258.1 mouse_genomes_project 16 14209408 14214298 + MGP_CBAJ_P0042914 Yars2 protein_coding protein_coding MGP_CBAJ_T0044343.1 MGP_CBAJ_G0022597.1 mouse_genomes_project 16 60167998 60200740 + MGP_CBAJ_P0044343 Tomm70a protein_coding protein_coding MGP_CBAJ_T0043991.1 MGP_CBAJ_G0022511.1 mouse_genomes_project 16 39314716 39367350 - MGP_CBAJ_P0043991 Maats1 protein_coding protein_coding MGP_CBAJ_T0043992.1 MGP_CBAJ_G0022511.1 mouse_genomes_project 16 39343641 39367317 - MGP_CBAJ_P0043992 Maats1 protein_coding protein_coding MGP_CBAJ_T0043993.1 MGP_CBAJ_G0022511.1 mouse_genomes_project 16 39353557 39367648 - Maats1 protein_coding processed_transcript MGP_CBAJ_T0044580.1 MGP_CBAJ_G0022683.1 mouse_genomes_project 16 95435068 95613937 - MGP_CBAJ_P0044580 Grik1 protein_coding protein_coding MGP_CBAJ_T0044581.1 MGP_CBAJ_G0022683.1 mouse_genomes_project 16 95435068 95646628 - MGP_CBAJ_P0044581 Grik1 protein_coding unknown_likely_coding MGP_CBAJ_T0044582.1 MGP_CBAJ_G0022683.1 mouse_genomes_project 16 95435068 95613937 - MGP_CBAJ_P0044582 Grik1 protein_coding protein_coding MGP_CBAJ_T0044583.1 MGP_CBAJ_G0022683.1 mouse_genomes_project 16 95435068 95614553 - MGP_CBAJ_P0044583 Grik1 protein_coding unknown_likely_coding MGP_CBAJ_T0044584.1 MGP_CBAJ_G0022683.1 mouse_genomes_project 16 95457189 95613937 - MGP_CBAJ_P0044584 Grik1 protein_coding protein_coding MGP_CBAJ_T0044692.1 MGP_CBAJ_G0022735.1 mouse_genomes_project 16 99202468 99205740 - MGP_CBAJ_P0044692 Gm9881 protein_coding protein_coding MGP_CBAJ_T0044627.1 MGP_CBAJ_G0022722.1 mouse_genomes_project 16 97351144 97352152 - MGP_CBAJ_P0044627 Krtap11-1 protein_coding protein_coding MGP_CBAJ_T0044454.1 MGP_CBAJ_G0022647.1 mouse_genomes_project 16 69857055 69875297 + MGP_CBAJ_P0044454 Pou1f1 protein_coding protein_coding MGP_CBAJ_T0044455.1 MGP_CBAJ_G0022647.1 mouse_genomes_project 16 69857056 69863377 + Pou1f1 protein_coding retained_intron MGP_CBAJ_T0044456.1 MGP_CBAJ_G0022647.1 mouse_genomes_project 16 69857056 69875699 + MGP_CBAJ_P0044456 Pou1f1 protein_coding protein_coding MGP_CBAJ_T0044457.1 MGP_CBAJ_G0022647.1 mouse_genomes_project 16 69857092 69875265 + MGP_CBAJ_P0044457 Pou1f1 protein_coding protein_coding MGP_CBAJ_T0044458.1 MGP_CBAJ_G0022647.1 mouse_genomes_project 16 69861110 69875126 + MGP_CBAJ_P0044458 Pou1f1 protein_coding protein_coding MGP_CBAJ_T0044217.1 MGP_CBAJ_G0022561.1 mouse_genomes_project 16 47698734 47754517 - MGP_CBAJ_P0044217 Plcxd2 protein_coding protein_coding MGP_CBAJ_T0009988.1 MGP_CBAJ_G0008126.1 mouse_genomes_project 16 7505520 7505592 + Gm22932 miRNA miRNA MGP_CBAJ_T0042729.1 MGP_CBAJ_G0022210.1 mouse_genomes_project 16 7757093 7811274 + MGP_CBAJ_P0042729 Ciita protein_coding unknown_likely_coding MGP_CBAJ_T0042730.1 MGP_CBAJ_G0022210.1 mouse_genomes_project 16 7763754 7813585 + MGP_CBAJ_P0042730 Ciita protein_coding protein_coding MGP_CBAJ_T0044611.1 MGP_CBAJ_G0022708.1 mouse_genomes_project 16 96713238 96713770 - MGP_CBAJ_P0044611 protein_coding protein_coding MGP_CBAJ_T0044173.1 MGP_CBAJ_G0022551.1 mouse_genomes_project 16 46899132 46928513 + MGP_CBAJ_P0044173 Btla protein_coding protein_coding MGP_CBAJ_T0044174.1 MGP_CBAJ_G0022551.1 mouse_genomes_project 16 46899154 46928516 + MGP_CBAJ_P0044174 Btla protein_coding protein_coding MGP_CBAJ_T0043264.1 MGP_CBAJ_G0022328.1 mouse_genomes_project 16 17732774 17733716 - MGP_CBAJ_P0043264 Olfr165 protein_coding protein_coding MGP_CBAJ_T0009985.1 MGP_CBAJ_G0008123.1 mouse_genomes_project 16 477116 477204 + Gm23493 miRNA miRNA MGP_CBAJ_T0044607.1 MGP_CBAJ_G0022704.1 mouse_genomes_project 16 96635644 96636245 - MGP_CBAJ_P0044607 Krtap16-3 protein_coding protein_coding MGP_CBAJ_T0098937.1 MGP_CBAJ_G0037192.1 mouse_genomes_project 16 8534466 8534629 - Gm24145 snRNA snRNA MGP_CBAJ_T0044460.1 MGP_CBAJ_G0022649.1 mouse_genomes_project 16 70179331 70229126 + MGP_CBAJ_P0044460 Vgll3 protein_coding protein_coding MGP_CBAJ_T0044461.1 MGP_CBAJ_G0022649.1 mouse_genomes_project 16 70179331 70226782 + MGP_CBAJ_P0044461 Vgll3 protein_coding unknown_likely_coding MGP_CBAJ_T0043267.1 MGP_CBAJ_G0022330.1 mouse_genomes_project 16 17862635 17865042 - MGP_CBAJ_P0043267 protein_coding protein_coding MGP_CBAJ_T0010031.1 MGP_CBAJ_G0008169.1 mouse_genomes_project 16 69748101 69748211 + Gm23659 miRNA miRNA MGP_CBAJ_T0043157.1 MGP_CBAJ_G0022307.1 mouse_genomes_project 16 16403150 16412060 - MGP_CBAJ_P0043157 Ranbp1 protein_coding protein_coding MGP_CBAJ_T0043158.1 MGP_CBAJ_G0022307.1 mouse_genomes_project 16 16408336 16412014 - Ranbp1 protein_coding retained_intron MGP_CBAJ_T0043159.1 MGP_CBAJ_G0022307.1 mouse_genomes_project 16 16408572 16411802 - Ranbp1 protein_coding processed_transcript MGP_CBAJ_T0043461.1 MGP_CBAJ_G0022374.1 mouse_genomes_project 16 21648888 21698946 - MGP_CBAJ_P0043461 Tbccd1 protein_coding unknown_likely_coding MGP_CBAJ_T0044409.1 MGP_CBAJ_G0022626.1 mouse_genomes_project 16 62499605 62505181 - MGP_CBAJ_P0044409 Olfr198 protein_coding protein_coding MGP_CBAJ_T0044440.1 MGP_CBAJ_G0022638.1 mouse_genomes_project 16 66684868 66737549 - MGP_CBAJ_P0044440 Arl13b protein_coding protein_coding MGP_CBAJ_T0044441.1 MGP_CBAJ_G0022638.1 mouse_genomes_project 16 66686535 66693959 - Arl13b protein_coding processed_transcript MGP_CBAJ_T0044443.1 MGP_CBAJ_G0022638.1 mouse_genomes_project 16 66716613 66737549 - Arl13b protein_coding retained_intron MGP_CBAJ_T0097781.1 MGP_CBAJ_G0036054.1 mouse_genomes_project 16 62264894 62265775 - pseudogene pseudogene MGP_CBAJ_T0012976.1 MGP_CBAJ_G0011088.1 mouse_genomes_project 16 18977455 18977738 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0042994.1 MGP_CBAJ_G0022273.1 mouse_genomes_project 16 15149307 15157473 - MGP_CBAJ_P0042994 Ccdc116 protein_coding protein_coding MGP_CBAJ_T0042995.1 MGP_CBAJ_G0022273.1 mouse_genomes_project 16 15149476 15154326 - MGP_CBAJ_P0042995 Ccdc116 protein_coding unknown_likely_coding MGP_CBAJ_T0042996.1 MGP_CBAJ_G0022273.1 mouse_genomes_project 16 15151279 15154453 - MGP_CBAJ_P0042996 Ccdc116 protein_coding protein_coding MGP_CBAJ_T0042997.1 MGP_CBAJ_G0022273.1 mouse_genomes_project 16 15151280 15154667 - MGP_CBAJ_P0042997 Ccdc116 protein_coding protein_coding MGP_CBAJ_T0042998.1 MGP_CBAJ_G0022273.1 mouse_genomes_project 16 15152964 15154682 - Ccdc116 protein_coding processed_transcript MGP_CBAJ_T0043495.1 MGP_CBAJ_G0022381.1 mouse_genomes_project 16 22028586 22044591 - MGP_CBAJ_P0043495 Rfc4 protein_coding protein_coding MGP_CBAJ_T0043496.1 MGP_CBAJ_G0022381.1 mouse_genomes_project 16 22028586 22044571 - MGP_CBAJ_P0043496 Rfc4 protein_coding protein_coding MGP_CBAJ_T0043497.1 MGP_CBAJ_G0022381.1 mouse_genomes_project 16 22028626 22029376 - Rfc4 protein_coding retained_intron MGP_CBAJ_T0043498.1 MGP_CBAJ_G0022381.1 mouse_genomes_project 16 22029338 22044545 - MGP_CBAJ_P0043498 Rfc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043499.1 MGP_CBAJ_G0022381.1 mouse_genomes_project 16 22035540 22044582 - MGP_CBAJ_P0043499 Rfc4 protein_coding protein_coding MGP_CBAJ_T0012959.1 MGP_CBAJ_G0011071.1 mouse_genomes_project 16 11731133 11732088 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0044554.1 MGP_CBAJ_G0022678.1 mouse_genomes_project 16 94917225 94924392 - MGP_CBAJ_P0044554 Rwdd2b protein_coding protein_coding MGP_CBAJ_T0044555.1 MGP_CBAJ_G0022678.1 mouse_genomes_project 16 94920514 94924392 - Rwdd2b protein_coding processed_transcript MGP_CBAJ_T0012977.1 MGP_CBAJ_G0011089.1 mouse_genomes_project 16 19106934 19107426 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0042674.1 MGP_CBAJ_G0022196.1 mouse_genomes_project 16 5521509 5640888 + MGP_CBAJ_P0042674 Abat protein_coding protein_coding MGP_CBAJ_T0042675.1 MGP_CBAJ_G0022196.1 mouse_genomes_project 16 5521561 5622342 + MGP_CBAJ_P0042675 Abat protein_coding protein_coding MGP_CBAJ_T0042676.1 MGP_CBAJ_G0022196.1 mouse_genomes_project 16 5521563 5594180 + Abat protein_coding retained_intron MGP_CBAJ_T0042677.1 MGP_CBAJ_G0022196.1 mouse_genomes_project 16 5521565 5638890 + MGP_CBAJ_P0042677 Abat protein_coding protein_coding MGP_CBAJ_T0042678.1 MGP_CBAJ_G0022196.1 mouse_genomes_project 16 5586387 5624920 + MGP_CBAJ_P0042678 Abat protein_coding protein_coding MGP_CBAJ_T0042679.1 MGP_CBAJ_G0022196.1 mouse_genomes_project 16 5597122 5622342 + MGP_CBAJ_P0042679 Abat protein_coding protein_coding MGP_CBAJ_T0042680.1 MGP_CBAJ_G0022196.1 mouse_genomes_project 16 5632164 5637897 + Abat protein_coding processed_transcript MGP_CBAJ_T0013012.1 MGP_CBAJ_G0011124.1 mouse_genomes_project 16 59963463 59964406 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013001.1 MGP_CBAJ_G0011113.1 mouse_genomes_project 16 44686254 44687410 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0042942.1 MGP_CBAJ_G0022265.1 mouse_genomes_project 16 14843140 14844197 - MGP_CBAJ_P0042942 Vpreb1 protein_coding protein_coding MGP_CBAJ_T0006773.1 MGP_CBAJ_G0005578.1 mouse_genomes_project 16 91801407 91813298 + Mir155hg lincRNA lincRNA MGP_CBAJ_T0006774.1 MGP_CBAJ_G0005578.1 mouse_genomes_project 16 91811075 91813298 + Mir155hg lincRNA lincRNA MGP_CBAJ_T0043160.1 MGP_CBAJ_G0022308.1 mouse_genomes_project 16 16412046 16416870 + Trmt2a protein_coding retained_intron MGP_CBAJ_T0043161.1 MGP_CBAJ_G0022308.1 mouse_genomes_project 16 16412250 16416870 + MGP_CBAJ_P0043161 Trmt2a protein_coding protein_coding MGP_CBAJ_T0043162.1 MGP_CBAJ_G0022308.1 mouse_genomes_project 16 16412250 16418140 + MGP_CBAJ_P0043162 Trmt2a protein_coding protein_coding MGP_CBAJ_T0043163.1 MGP_CBAJ_G0022308.1 mouse_genomes_project 16 16412369 16416870 + Trmt2a protein_coding retained_intron MGP_CBAJ_T0043164.1 MGP_CBAJ_G0022308.1 mouse_genomes_project 16 16412376 16416876 + Trmt2a protein_coding retained_intron MGP_CBAJ_T0043165.1 MGP_CBAJ_G0022308.1 mouse_genomes_project 16 16412376 16416866 + Trmt2a protein_coding retained_intron MGP_CBAJ_T0043166.1 MGP_CBAJ_G0022308.1 mouse_genomes_project 16 16412429 16416870 + MGP_CBAJ_P0043166 Trmt2a protein_coding protein_coding MGP_CBAJ_T0043167.1 MGP_CBAJ_G0022308.1 mouse_genomes_project 16 16413388 16416480 + MGP_CBAJ_P0043167 Trmt2a protein_coding protein_coding MGP_CBAJ_T0043168.1 MGP_CBAJ_G0022308.1 mouse_genomes_project 16 16414789 16416869 + MGP_CBAJ_P0043168 Trmt2a protein_coding protein_coding MGP_CBAJ_T0043169.1 MGP_CBAJ_G0022308.1 mouse_genomes_project 16 16415588 16416599 + Trmt2a protein_coding retained_intron MGP_CBAJ_T0101056.1 MGP_CBAJ_G0039279.1 mouse_genomes_project 16 51489277 51489652 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101057.1 MGP_CBAJ_G0039279.1 mouse_genomes_project 16 51489406 51490415 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0042483.1 MGP_CBAJ_G0022150.1 mouse_genomes_project 16 235140 246050 - MGP_CBAJ_P0042483 Mefv protein_coding protein_coding MGP_CBAJ_T0042484.1 MGP_CBAJ_G0022150.1 mouse_genomes_project 16 235140 246050 - MGP_CBAJ_P0042484 Mefv protein_coding protein_coding MGP_CBAJ_T0101677.1 MGP_CBAJ_G0039708.1 mouse_genomes_project 16 62211249 62213141 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0017240.1 MGP_CBAJ_G0015060.1 mouse_genomes_project 16 44193137 44337532 - 4932412D23Rik processed_transcript processed_transcript MGP_CBAJ_T0017241.1 MGP_CBAJ_G0015060.1 mouse_genomes_project 16 44280691 44337707 - 4932412D23Rik processed_transcript processed_transcript MGP_CBAJ_T0017242.1 MGP_CBAJ_G0015060.1 mouse_genomes_project 16 44281052 44337685 - 4932412D23Rik processed_transcript processed_transcript MGP_CBAJ_T0017243.1 MGP_CBAJ_G0015060.1 mouse_genomes_project 16 44281204 44337691 - 4932412D23Rik processed_transcript processed_transcript MGP_CBAJ_T0043320.1 MGP_CBAJ_G0022346.1 mouse_genomes_project 16 18942781 18958812 + MGP_CBAJ_P0043320 Dvl3 protein_coding protein_coding MGP_CBAJ_T0043321.1 MGP_CBAJ_G0022346.1 mouse_genomes_project 16 18942863 18959682 + MGP_CBAJ_P0043321 Dvl3 protein_coding protein_coding MGP_CBAJ_T0043322.1 MGP_CBAJ_G0022346.1 mouse_genomes_project 16 18942905 18958808 + MGP_CBAJ_P0043322 Dvl3 protein_coding protein_coding MGP_CBAJ_T0043323.1 MGP_CBAJ_G0022346.1 mouse_genomes_project 16 18942985 18952481 + Dvl3 protein_coding retained_intron MGP_CBAJ_T0044596.1 MGP_CBAJ_G0022695.1 mouse_genomes_project 16 96484874 96492023 - MGP_CBAJ_P0044596 Krtap14 protein_coding protein_coding MGP_CBAJ_T0044598.1 MGP_CBAJ_G0022695.1 mouse_genomes_project 16 96491489 96492346 - MGP_CBAJ_P0044598 Krtap14 protein_coding protein_coding MGP_CBAJ_T0101054.1 MGP_CBAJ_G0039277.1 mouse_genomes_project 16 13247976 13248661 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0042758.1 MGP_CBAJ_G0022221.1 mouse_genomes_project 16 8432724 8441455 + MGP_CBAJ_P0042758 Snn protein_coding protein_coding MGP_CBAJ_T0010039.1 MGP_CBAJ_G0008177.1 mouse_genomes_project 16 91812192 91812257 + Mir155 miRNA miRNA MGP_CBAJ_T0013024.1 MGP_CBAJ_G0011136.1 mouse_genomes_project 16 86284172 86284602 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0003603.1 MGP_CBAJ_G0003260.1 mouse_genomes_project 16 37724281 37740948 - 4930565N06Rik antisense antisense MGP_CBAJ_T0044108.1 MGP_CBAJ_G0022538.1 mouse_genomes_project 16 45823555 45933690 - MGP_CBAJ_P0044108 Sidt1 protein_coding protein_coding MGP_CBAJ_T0044109.1 MGP_CBAJ_G0022538.1 mouse_genomes_project 16 45823619 45934153 - MGP_CBAJ_P0044109 Sidt1 protein_coding protein_coding MGP_CBAJ_T0044110.1 MGP_CBAJ_G0022538.1 mouse_genomes_project 16 45860079 45871852 - Sidt1 protein_coding retained_intron MGP_CBAJ_T0044111.1 MGP_CBAJ_G0022538.1 mouse_genomes_project 16 45871411 45872511 - MGP_CBAJ_P0044111 Sidt1 protein_coding protein_coding MGP_CBAJ_T0044112.1 MGP_CBAJ_G0022538.1 mouse_genomes_project 16 45874262 45933703 - Sidt1 protein_coding processed_transcript MGP_CBAJ_T0044280.1 MGP_CBAJ_G0022582.1 mouse_genomes_project 16 58020387 58086689 - MGP_CBAJ_P0044280 Zpld1 protein_coding protein_coding MGP_CBAJ_T0044281.1 MGP_CBAJ_G0022582.1 mouse_genomes_project 16 58020387 58100909 - MGP_CBAJ_P0044281 Zpld1 protein_coding protein_coding MGP_CBAJ_T0003571.1 MGP_CBAJ_G0003235.1 mouse_genomes_project 16 606311 610992 - Gm15879 antisense antisense MGP_CBAJ_T0003572.1 MGP_CBAJ_G0003235.1 mouse_genomes_project 16 607843 611320 - Gm15879 antisense antisense MGP_CBAJ_T0017270.1 MGP_CBAJ_G0015070.1 mouse_genomes_project 16 99713787 99726468 + Gm15964 processed_transcript processed_transcript MGP_CBAJ_T0044622.1 MGP_CBAJ_G0022717.1 mouse_genomes_project 16 96916176 96916704 + MGP_CBAJ_P0044622 Krtap20-2 protein_coding protein_coding MGP_CBAJ_T0013017.1 MGP_CBAJ_G0011129.1 mouse_genomes_project 16 69147971 69148919 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0044009.1 MGP_CBAJ_G0022518.1 mouse_genomes_project 16 39530639 39554569 - MGP_CBAJ_P0044009 Timmdc1 protein_coding protein_coding MGP_CBAJ_T0044010.1 MGP_CBAJ_G0022518.1 mouse_genomes_project 16 39548567 39554547 - Timmdc1 protein_coding processed_transcript MGP_CBAJ_T0010012.1 MGP_CBAJ_G0008150.1 mouse_genomes_project 16 31101358 31101453 + Gm27415 miRNA miRNA MGP_CBAJ_T0043794.1 MGP_CBAJ_G0022459.1 mouse_genomes_project 16 33908128 33951705 + Heg1 protein_coding retained_intron MGP_CBAJ_T0043795.1 MGP_CBAJ_G0022459.1 mouse_genomes_project 16 33908128 34007126 + MGP_CBAJ_P0043795 Heg1 protein_coding protein_coding MGP_CBAJ_T0043796.1 MGP_CBAJ_G0022459.1 mouse_genomes_project 16 33908207 34004993 + MGP_CBAJ_P0043796 Heg1 protein_coding protein_coding MGP_CBAJ_T0043797.1 MGP_CBAJ_G0022459.1 mouse_genomes_project 16 33908274 34007107 + MGP_CBAJ_P0043797 Heg1 protein_coding unknown_likely_coding MGP_CBAJ_T0043798.1 MGP_CBAJ_G0022459.1 mouse_genomes_project 16 33962639 33971317 + Heg1 protein_coding processed_transcript MGP_CBAJ_T0043799.1 MGP_CBAJ_G0022459.1 mouse_genomes_project 16 33986586 33996560 + Heg1 protein_coding retained_intron MGP_CBAJ_T0043800.1 MGP_CBAJ_G0022459.1 mouse_genomes_project 16 33988962 34004383 + Heg1 protein_coding processed_transcript MGP_CBAJ_T0043801.1 MGP_CBAJ_G0022459.1 mouse_genomes_project 16 33989935 33996406 + Heg1 protein_coding retained_intron MGP_CBAJ_T0043653.1 MGP_CBAJ_G0022426.1 mouse_genomes_project 16 31854590 31856035 - MGP_CBAJ_P0043653 0610012G03Rik protein_coding protein_coding MGP_CBAJ_T0044897.1 MGP_CBAJ_G0022775.1 mouse_genomes_project 16 103873256 103928581 + MGP_CBAJ_P0044897 Kcnj15 protein_coding protein_coding MGP_CBAJ_T0044898.1 MGP_CBAJ_G0022775.1 mouse_genomes_project 16 103873256 103929169 + MGP_CBAJ_P0044898 Kcnj15 protein_coding protein_coding MGP_CBAJ_T0044899.1 MGP_CBAJ_G0022775.1 mouse_genomes_project 16 103873256 103929169 + MGP_CBAJ_P0044899 Kcnj15 protein_coding protein_coding MGP_CBAJ_T0044900.1 MGP_CBAJ_G0022775.1 mouse_genomes_project 16 103873256 103929169 + MGP_CBAJ_P0044900 Kcnj15 protein_coding protein_coding MGP_CBAJ_T0044901.1 MGP_CBAJ_G0022775.1 mouse_genomes_project 16 103873256 103927443 + MGP_CBAJ_P0044901 Kcnj15 protein_coding protein_coding MGP_CBAJ_T0044902.1 MGP_CBAJ_G0022775.1 mouse_genomes_project 16 103873349 103929218 + MGP_CBAJ_P0044902 Kcnj15 protein_coding protein_coding MGP_CBAJ_T0044903.1 MGP_CBAJ_G0022775.1 mouse_genomes_project 16 103873357 103924979 + MGP_CBAJ_P0044903 Kcnj15 protein_coding protein_coding MGP_CBAJ_T0044904.1 MGP_CBAJ_G0022775.1 mouse_genomes_project 16 103873357 103924644 + MGP_CBAJ_P0044904 Kcnj15 protein_coding protein_coding MGP_CBAJ_T0044905.1 MGP_CBAJ_G0022775.1 mouse_genomes_project 16 103873381 103924621 + MGP_CBAJ_P0044905 Kcnj15 protein_coding protein_coding MGP_CBAJ_T0044906.1 MGP_CBAJ_G0022775.1 mouse_genomes_project 16 103875150 103929169 + MGP_CBAJ_P0044906 Kcnj15 protein_coding protein_coding MGP_CBAJ_T0044907.1 MGP_CBAJ_G0022775.1 mouse_genomes_project 16 103875305 103917583 + Kcnj15 protein_coding processed_transcript MGP_CBAJ_T0044908.1 MGP_CBAJ_G0022775.1 mouse_genomes_project 16 103875366 103929169 + MGP_CBAJ_P0044908 Kcnj15 protein_coding protein_coding MGP_CBAJ_T0044909.1 MGP_CBAJ_G0022775.1 mouse_genomes_project 16 103897865 103917646 + MGP_CBAJ_P0044909 Kcnj15 protein_coding protein_coding MGP_CBAJ_T0043691.1 MGP_CBAJ_G0022436.1 mouse_genomes_project 16 32212593 32217052 + MGP_CBAJ_P0043691 Smco1 protein_coding protein_coding MGP_CBAJ_T0012998.1 MGP_CBAJ_G0011110.1 mouse_genomes_project 16 39808665 39810246 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0043881.1 MGP_CBAJ_G0022481.1 mouse_genomes_project 16 36681044 36695520 - MGP_CBAJ_P0043881 Csta1 protein_coding protein_coding MGP_CBAJ_T0043882.1 MGP_CBAJ_G0022481.1 mouse_genomes_project 16 36683267 36695484 - MGP_CBAJ_P0043882 Csta1 protein_coding protein_coding MGP_CBAJ_T0044447.1 MGP_CBAJ_G0022641.1 mouse_genomes_project 16 67567389 67932999 - MGP_CBAJ_P0044447 Epha3 protein_coding protein_coding MGP_CBAJ_T0042499.1 MGP_CBAJ_G0022155.1 mouse_genomes_project 16 416973 450829 + MGP_CBAJ_P0042499 Naa60 protein_coding protein_coding MGP_CBAJ_T0042500.1 MGP_CBAJ_G0022155.1 mouse_genomes_project 16 431784 454798 + MGP_CBAJ_P0042500 Naa60 protein_coding protein_coding MGP_CBAJ_T0042502.1 MGP_CBAJ_G0022155.1 mouse_genomes_project 16 431824 452066 + MGP_CBAJ_P0042502 Naa60 protein_coding protein_coding MGP_CBAJ_T0042503.1 MGP_CBAJ_G0022155.1 mouse_genomes_project 16 431833 447366 + MGP_CBAJ_P0042503 Naa60 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042504.1 MGP_CBAJ_G0022155.1 mouse_genomes_project 16 431848 453767 + MGP_CBAJ_P0042504 Naa60 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042505.1 MGP_CBAJ_G0022155.1 mouse_genomes_project 16 431848 454788 + MGP_CBAJ_P0042505 Naa60 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042506.1 MGP_CBAJ_G0022155.1 mouse_genomes_project 16 431851 447397 + MGP_CBAJ_P0042506 Naa60 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042507.1 MGP_CBAJ_G0022155.1 mouse_genomes_project 16 431878 450418 + Naa60 protein_coding retained_intron MGP_CBAJ_T0042508.1 MGP_CBAJ_G0022155.1 mouse_genomes_project 16 431934 454787 + MGP_CBAJ_P0042508 Naa60 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042509.1 MGP_CBAJ_G0022155.1 mouse_genomes_project 16 444392 451832 + MGP_CBAJ_P0042509 Naa60 protein_coding protein_coding MGP_CBAJ_T0042510.1 MGP_CBAJ_G0022155.1 mouse_genomes_project 16 444392 452394 + MGP_CBAJ_P0042510 Naa60 protein_coding protein_coding MGP_CBAJ_T0042511.1 MGP_CBAJ_G0022155.1 mouse_genomes_project 16 444392 451957 + MGP_CBAJ_P0042511 Naa60 protein_coding protein_coding MGP_CBAJ_T0043746.1 MGP_CBAJ_G0022450.1 mouse_genomes_project 16 32937801 32954469 + Fyttd1 protein_coding processed_transcript MGP_CBAJ_T0043747.1 MGP_CBAJ_G0022450.1 mouse_genomes_project 16 32938082 32973420 + MGP_CBAJ_P0043747 Fyttd1 protein_coding protein_coding MGP_CBAJ_T0043748.1 MGP_CBAJ_G0022450.1 mouse_genomes_project 16 32938085 32973508 + MGP_CBAJ_P0043748 Fyttd1 protein_coding protein_coding MGP_CBAJ_T0043749.1 MGP_CBAJ_G0022450.1 mouse_genomes_project 16 32938114 32958717 + Fyttd1 protein_coding retained_intron MGP_CBAJ_T0043750.1 MGP_CBAJ_G0022450.1 mouse_genomes_project 16 32938114 32960717 + Fyttd1 protein_coding processed_transcript MGP_CBAJ_T0043751.1 MGP_CBAJ_G0022450.1 mouse_genomes_project 16 32938152 32962318 + Fyttd1 protein_coding retained_intron MGP_CBAJ_T0043752.1 MGP_CBAJ_G0022450.1 mouse_genomes_project 16 32946210 32970177 + MGP_CBAJ_P0043752 Fyttd1 protein_coding protein_coding MGP_CBAJ_T0043753.1 MGP_CBAJ_G0022450.1 mouse_genomes_project 16 32958551 32970326 + Fyttd1 protein_coding processed_transcript MGP_CBAJ_T0043754.1 MGP_CBAJ_G0022450.1 mouse_genomes_project 16 32962216 32970249 + Fyttd1 protein_coding retained_intron MGP_CBAJ_T0043755.1 MGP_CBAJ_G0022450.1 mouse_genomes_project 16 32963690 32970185 + Fyttd1 protein_coding retained_intron MGP_CBAJ_T0043756.1 MGP_CBAJ_G0022450.1 mouse_genomes_project 16 32965565 32970151 + Fyttd1 protein_coding retained_intron MGP_CBAJ_T0101672.1 MGP_CBAJ_G0039703.1 mouse_genomes_project 16 14608039 14608160 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013010.1 MGP_CBAJ_G0011122.1 mouse_genomes_project 16 52875283 52876622 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006758.1 MGP_CBAJ_G0005569.1 mouse_genomes_project 16 51900351 51904689 + Gm16619 lincRNA lincRNA MGP_CBAJ_T0044714.1 MGP_CBAJ_G0022743.1 mouse_genomes_project 16 99667267 99700833 - MGP_CBAJ_P0044714 Tmem50b protein_coding protein_coding MGP_CBAJ_T0044715.1 MGP_CBAJ_G0022743.1 mouse_genomes_project 16 99668522 99700697 - MGP_CBAJ_P0044715 Tmem50b protein_coding nonsense_mediated_decay MGP_CBAJ_T0044716.1 MGP_CBAJ_G0022743.1 mouse_genomes_project 16 99673093 99700833 - MGP_CBAJ_P0044716 Tmem50b protein_coding nonsense_mediated_decay MGP_CBAJ_T0044957.1 MGP_CBAJ_G0022783.1 mouse_genomes_project 16 105006107 105034543 + MGP_CBAJ_P0044957 Sh3bgr protein_coding protein_coding MGP_CBAJ_T0044958.1 MGP_CBAJ_G0022783.1 mouse_genomes_project 16 105006308 105034538 + MGP_CBAJ_P0044958 Sh3bgr protein_coding protein_coding MGP_CBAJ_T0044959.1 MGP_CBAJ_G0022783.1 mouse_genomes_project 16 105006308 105030202 + MGP_CBAJ_P0044959 Sh3bgr protein_coding protein_coding MGP_CBAJ_T0044960.1 MGP_CBAJ_G0022783.1 mouse_genomes_project 16 105006341 105025738 + MGP_CBAJ_P0044960 Sh3bgr protein_coding protein_coding MGP_CBAJ_T0044961.1 MGP_CBAJ_G0022783.1 mouse_genomes_project 16 105006366 105030233 + MGP_CBAJ_P0044961 Sh3bgr protein_coding protein_coding MGP_CBAJ_T0044962.1 MGP_CBAJ_G0022783.1 mouse_genomes_project 16 105010772 105025738 + MGP_CBAJ_P0044962 Sh3bgr protein_coding protein_coding MGP_CBAJ_T0044963.1 MGP_CBAJ_G0022783.1 mouse_genomes_project 16 105011679 105030205 + MGP_CBAJ_P0044963 Sh3bgr protein_coding protein_coding MGP_CBAJ_T0044964.1 MGP_CBAJ_G0022783.1 mouse_genomes_project 16 105025645 105034535 + MGP_CBAJ_P0044964 Sh3bgr protein_coding protein_coding MGP_CBAJ_T0010047.1 MGP_CBAJ_G0008185.1 mouse_genomes_project 16 106879893 106879952 - Mir6964 miRNA miRNA MGP_CBAJ_T0044398.1 MGP_CBAJ_G0022618.1 mouse_genomes_project 16 62217196 62218201 - MGP_CBAJ_P0044398 Olfr186 protein_coding protein_coding MGP_CBAJ_T0044399.1 MGP_CBAJ_G0022618.1 mouse_genomes_project 16 62217793 62220537 - MGP_CBAJ_P0044399 Olfr186 protein_coding protein_coding MGP_CBAJ_T0043512.1 MGP_CBAJ_G0022387.1 mouse_genomes_project 16 22602134 22609470 + MGP_CBAJ_P0043512 Rtp4 protein_coding protein_coding MGP_CBAJ_T0097777.1 MGP_CBAJ_G0036050.1 mouse_genomes_project 16 13730587 13731768 + pseudogene pseudogene MGP_CBAJ_T0044616.1 MGP_CBAJ_G0022712.1 mouse_genomes_project 16 96849595 96850084 + MGP_CBAJ_P0044616 Gm6358 protein_coding protein_coding MGP_CBAJ_T0044617.1 MGP_CBAJ_G0022712.1 mouse_genomes_project 16 96849688 96849844 + MGP_CBAJ_P0044617 Gm6358 protein_coding protein_coding MGP_CBAJ_T0043547.1 MGP_CBAJ_G0022400.1 mouse_genomes_project 16 26722258 26772508 + MGP_CBAJ_P0043547 Ostn protein_coding protein_coding MGP_CBAJ_T0000925.1 MGP_CBAJ_G0000859.1 mouse_genomes_project 16 61474254 61476556 - TEC TEC MGP_CBAJ_T0101411.1 MGP_CBAJ_G0039462.1 mouse_genomes_project 16 18840377 18851832 + unitary_pseudogene unitary_pseudogene MGP_CBAJ_T0010025.1 MGP_CBAJ_G0008163.1 mouse_genomes_project 16 56462686 56462751 + Gm25041 miRNA miRNA MGP_CBAJ_T0044434.1 MGP_CBAJ_G0022637.1 mouse_genomes_project 16 66623996 66677953 - MGP_CBAJ_P0044434 Nsun3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044435.1 MGP_CBAJ_G0022637.1 mouse_genomes_project 16 66623996 66677953 - MGP_CBAJ_P0044435 Nsun3 protein_coding protein_coding MGP_CBAJ_T0044436.1 MGP_CBAJ_G0022637.1 mouse_genomes_project 16 66626720 66658108 - Nsun3 protein_coding processed_transcript MGP_CBAJ_T0044437.1 MGP_CBAJ_G0022637.1 mouse_genomes_project 16 66661869 66677942 - MGP_CBAJ_P0044437 Nsun3 protein_coding protein_coding MGP_CBAJ_T0044438.1 MGP_CBAJ_G0022637.1 mouse_genomes_project 16 66667326 66677994 - Nsun3 protein_coding processed_transcript MGP_CBAJ_T0044439.1 MGP_CBAJ_G0022637.1 mouse_genomes_project 16 66670411 66677889 - Nsun3 protein_coding processed_transcript MGP_CBAJ_T0044453.1 MGP_CBAJ_G0022646.1 mouse_genomes_project 16 69162483 69354537 - MGP_CBAJ_P0044453 Htr1f protein_coding protein_coding MGP_CBAJ_T0043878.1 MGP_CBAJ_G0022480.1 mouse_genomes_project 16 36605840 36636294 + MGP_CBAJ_P0043878 Ccdc58 protein_coding protein_coding MGP_CBAJ_T0043879.1 MGP_CBAJ_G0022480.1 mouse_genomes_project 16 36605840 36636294 + MGP_CBAJ_P0043879 Ccdc58 protein_coding protein_coding MGP_CBAJ_T0043880.1 MGP_CBAJ_G0022480.1 mouse_genomes_project 16 36622712 36636294 + MGP_CBAJ_P0043880 Ccdc58 protein_coding protein_coding MGP_CBAJ_T0003582.1 MGP_CBAJ_G0003244.1 mouse_genomes_project 16 15149918 15150727 + Gm15646 antisense antisense MGP_CBAJ_T0013004.1 MGP_CBAJ_G0011116.1 mouse_genomes_project 16 47117579 47121128 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0044011.1 MGP_CBAJ_G0022519.1 mouse_genomes_project 16 39557042 39588919 - MGP_CBAJ_P0044011 Poglut1 protein_coding protein_coding MGP_CBAJ_T0044012.1 MGP_CBAJ_G0022519.1 mouse_genomes_project 16 39557045 39588883 - Poglut1 protein_coding retained_intron MGP_CBAJ_T0044013.1 MGP_CBAJ_G0022519.1 mouse_genomes_project 16 39561365 39564400 - Poglut1 protein_coding retained_intron MGP_CBAJ_T0044014.1 MGP_CBAJ_G0022519.1 mouse_genomes_project 16 39566004 39569873 - Poglut1 protein_coding retained_intron MGP_CBAJ_T0044015.1 MGP_CBAJ_G0022519.1 mouse_genomes_project 16 39586680 39588883 - Poglut1 protein_coding retained_intron MGP_CBAJ_T0012957.1 MGP_CBAJ_G0011069.1 mouse_genomes_project 16 8913809 8915295 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0043651.1 MGP_CBAJ_G0022425.1 mouse_genomes_project 16 31840669 31853587 + MGP_CBAJ_P0043651 Pigz protein_coding protein_coding MGP_CBAJ_T0043652.1 MGP_CBAJ_G0022425.1 mouse_genomes_project 16 31840761 31851889 + Pigz protein_coding processed_transcript MGP_CBAJ_T0000017.1 MGP_CBAJ_G0000012.1 mouse_genomes_project 16 17355913 17356365 - MGP_CBAJ_P0000017 Iglc3 IG_C_gene IG_C_gene MGP_CBAJ_T0098979.1 MGP_CBAJ_G0037234.1 mouse_genomes_project 16 99389262 99389345 - Gm24695 snRNA snRNA MGP_CBAJ_T0043452.1 MGP_CBAJ_G0022371.1 mouse_genomes_project 16 21166287 21243436 - MGP_CBAJ_P0043452 protein_coding unknown_likely_coding MGP_CBAJ_T0043453.1 MGP_CBAJ_G0022371.1 mouse_genomes_project 16 21169220 21195640 - MGP_CBAJ_P0043453 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043454.1 MGP_CBAJ_G0022371.1 mouse_genomes_project 16 21195674 21243460 - protein_coding processed_transcript MGP_CBAJ_T0043455.1 MGP_CBAJ_G0022371.1 mouse_genomes_project 16 21206735 21243414 - MGP_CBAJ_P0043455 protein_coding protein_coding MGP_CBAJ_T0043615.1 MGP_CBAJ_G0022418.1 mouse_genomes_project 16 30761468 30903649 - MGP_CBAJ_P0043615 Xxylt1 protein_coding protein_coding MGP_CBAJ_T0043616.1 MGP_CBAJ_G0022418.1 mouse_genomes_project 16 30763302 30883609 - Xxylt1 protein_coding processed_transcript MGP_CBAJ_T0043617.1 MGP_CBAJ_G0022418.1 mouse_genomes_project 16 30828131 30892014 - Xxylt1 protein_coding processed_transcript MGP_CBAJ_T0043618.1 MGP_CBAJ_G0022418.1 mouse_genomes_project 16 30828173 30890041 - Xxylt1 protein_coding processed_transcript MGP_CBAJ_T0043673.1 MGP_CBAJ_G0022431.1 mouse_genomes_project 16 32034814 32043000 + MGP_CBAJ_P0043673 Cep19 protein_coding protein_coding MGP_CBAJ_T0043674.1 MGP_CBAJ_G0022431.1 mouse_genomes_project 16 32034966 32042982 + MGP_CBAJ_P0043674 Cep19 protein_coding protein_coding MGP_CBAJ_T0043675.1 MGP_CBAJ_G0022431.1 mouse_genomes_project 16 32039013 32042986 + MGP_CBAJ_P0043675 Cep19 protein_coding protein_coding MGP_CBAJ_T0044100.1 MGP_CBAJ_G0022536.1 mouse_genomes_project 16 45707480 45734430 + MGP_CBAJ_P0044100 Naa50 protein_coding protein_coding MGP_CBAJ_T0044101.1 MGP_CBAJ_G0022536.1 mouse_genomes_project 16 45707503 45735322 + MGP_CBAJ_P0044101 Naa50 protein_coding protein_coding MGP_CBAJ_T0044102.1 MGP_CBAJ_G0022536.1 mouse_genomes_project 16 45707536 45734428 + MGP_CBAJ_P0044102 Naa50 protein_coding protein_coding MGP_CBAJ_T0044103.1 MGP_CBAJ_G0022536.1 mouse_genomes_project 16 45707542 45733126 + MGP_CBAJ_P0044103 Naa50 protein_coding protein_coding MGP_CBAJ_T0010018.1 MGP_CBAJ_G0008156.1 mouse_genomes_project 16 42501624 42501684 + miRNA miRNA MGP_CBAJ_T0043131.1 MGP_CBAJ_G0022298.1 mouse_genomes_project 16 16001156 16002543 + MGP_CBAJ_P0043131 Tssk2 protein_coding protein_coding MGP_CBAJ_T0042803.1 MGP_CBAJ_G0022228.1 mouse_genomes_project 16 9259752 9366756 - MGP_CBAJ_P0042803 Cpped1 protein_coding protein_coding MGP_CBAJ_T0042804.1 MGP_CBAJ_G0022228.1 mouse_genomes_project 16 9259758 9366755 - MGP_CBAJ_P0042804 Cpped1 protein_coding protein_coding MGP_CBAJ_T0042805.1 MGP_CBAJ_G0022228.1 mouse_genomes_project 16 9286152 9366729 - Cpped1 protein_coding retained_intron MGP_CBAJ_T0042806.1 MGP_CBAJ_G0022228.1 mouse_genomes_project 16 9287141 9366731 - MGP_CBAJ_P0042806 Cpped1 protein_coding protein_coding MGP_CBAJ_T0042807.1 MGP_CBAJ_G0022228.1 mouse_genomes_project 16 9337137 9366778 - MGP_CBAJ_P0042807 Cpped1 protein_coding protein_coding MGP_CBAJ_T0043099.1 MGP_CBAJ_G0022290.1 mouse_genomes_project 16 15719327 15722273 + Ccdc74a protein_coding retained_intron MGP_CBAJ_T0043100.1 MGP_CBAJ_G0022290.1 mouse_genomes_project 16 15719332 15722099 + MGP_CBAJ_P0043100 Ccdc74a protein_coding nonsense_mediated_decay MGP_CBAJ_T0043101.1 MGP_CBAJ_G0022290.1 mouse_genomes_project 16 15719332 15723596 + MGP_CBAJ_P0043101 Ccdc74a protein_coding protein_coding MGP_CBAJ_T0043102.1 MGP_CBAJ_G0022290.1 mouse_genomes_project 16 15719408 15721331 + Ccdc74a protein_coding retained_intron MGP_CBAJ_T0043103.1 MGP_CBAJ_G0022290.1 mouse_genomes_project 16 15719421 15723595 + MGP_CBAJ_P0043103 Ccdc74a protein_coding protein_coding MGP_CBAJ_T0043104.1 MGP_CBAJ_G0022290.1 mouse_genomes_project 16 15719422 15723267 + MGP_CBAJ_P0043104 Ccdc74a protein_coding nonsense_mediated_decay MGP_CBAJ_T0043105.1 MGP_CBAJ_G0022290.1 mouse_genomes_project 16 15719470 15723596 + MGP_CBAJ_P0043105 Ccdc74a protein_coding protein_coding MGP_CBAJ_T0043106.1 MGP_CBAJ_G0022290.1 mouse_genomes_project 16 15719475 15723305 + MGP_CBAJ_P0043106 Ccdc74a protein_coding protein_coding MGP_CBAJ_T0043107.1 MGP_CBAJ_G0022290.1 mouse_genomes_project 16 15719530 15720719 + Ccdc74a protein_coding retained_intron MGP_CBAJ_T0043108.1 MGP_CBAJ_G0022290.1 mouse_genomes_project 16 15719557 15723596 + MGP_CBAJ_P0043108 Ccdc74a protein_coding nonsense_mediated_decay MGP_CBAJ_T0042878.1 MGP_CBAJ_G0022246.1 mouse_genomes_project 16 12053226 12071028 - MGP_CBAJ_P0042878 Fopnl protein_coding protein_coding MGP_CBAJ_T0042879.1 MGP_CBAJ_G0022246.1 mouse_genomes_project 16 12053431 12071039 - Fopnl protein_coding processed_transcript MGP_CBAJ_T0098952.1 MGP_CBAJ_G0037207.1 mouse_genomes_project 16 36704648 36704751 - Gm23080 snRNA snRNA MGP_CBAJ_T0043737.1 MGP_CBAJ_G0022449.1 mouse_genomes_project 16 32873753 32928602 - MGP_CBAJ_P0043737 Rubcn protein_coding protein_coding MGP_CBAJ_T0043738.1 MGP_CBAJ_G0022449.1 mouse_genomes_project 16 32873757 32876971 - Rubcn protein_coding retained_intron MGP_CBAJ_T0043739.1 MGP_CBAJ_G0022449.1 mouse_genomes_project 16 32873757 32928575 - MGP_CBAJ_P0043739 Rubcn protein_coding protein_coding MGP_CBAJ_T0043740.1 MGP_CBAJ_G0022449.1 mouse_genomes_project 16 32873770 32928375 - MGP_CBAJ_P0043740 Rubcn protein_coding protein_coding MGP_CBAJ_T0043741.1 MGP_CBAJ_G0022449.1 mouse_genomes_project 16 32873778 32928587 - MGP_CBAJ_P0043741 Rubcn protein_coding protein_coding MGP_CBAJ_T0043742.1 MGP_CBAJ_G0022449.1 mouse_genomes_project 16 32875517 32890619 - Rubcn protein_coding retained_intron MGP_CBAJ_T0043743.1 MGP_CBAJ_G0022449.1 mouse_genomes_project 16 32880001 32881755 - Rubcn protein_coding retained_intron MGP_CBAJ_T0043744.1 MGP_CBAJ_G0022449.1 mouse_genomes_project 16 32887550 32888596 - Rubcn protein_coding retained_intron MGP_CBAJ_T0043745.1 MGP_CBAJ_G0022449.1 mouse_genomes_project 16 32919524 32928574 - Rubcn protein_coding processed_transcript MGP_CBAJ_T0044992.1 MGP_CBAJ_G0022794.1 mouse_genomes_project 16 106784305 106853988 - MGP_CBAJ_P0044992 Prdm15 protein_coding protein_coding MGP_CBAJ_T0044993.1 MGP_CBAJ_G0022794.1 mouse_genomes_project 16 106784358 106854611 - MGP_CBAJ_P0044993 Prdm15 protein_coding protein_coding MGP_CBAJ_T0044994.1 MGP_CBAJ_G0022794.1 mouse_genomes_project 16 106784715 106854544 - MGP_CBAJ_P0044994 Prdm15 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044995.1 MGP_CBAJ_G0022794.1 mouse_genomes_project 16 106785168 106793162 - Prdm15 protein_coding retained_intron MGP_CBAJ_T0044996.1 MGP_CBAJ_G0022794.1 mouse_genomes_project 16 106787016 106842719 - MGP_CBAJ_P0044996 Prdm15 protein_coding unknown_likely_coding MGP_CBAJ_T0044997.1 MGP_CBAJ_G0022794.1 mouse_genomes_project 16 106787354 106799260 - Prdm15 protein_coding processed_transcript MGP_CBAJ_T0044998.1 MGP_CBAJ_G0022794.1 mouse_genomes_project 16 106788581 106790779 - Prdm15 protein_coding retained_intron MGP_CBAJ_T0044999.1 MGP_CBAJ_G0022794.1 mouse_genomes_project 16 106821467 106832413 - Prdm15 protein_coding retained_intron MGP_CBAJ_T0045000.1 MGP_CBAJ_G0022794.1 mouse_genomes_project 16 106838125 106842727 - Prdm15 protein_coding retained_intron MGP_CBAJ_T0045001.1 MGP_CBAJ_G0022794.1 mouse_genomes_project 16 106838543 106851644 - MGP_CBAJ_P0045001 Prdm15 protein_coding protein_coding MGP_CBAJ_T0045002.1 MGP_CBAJ_G0022794.1 mouse_genomes_project 16 106840440 106853988 - MGP_CBAJ_P0045002 Prdm15 protein_coding protein_coding MGP_CBAJ_T0043281.1 MGP_CBAJ_G0022338.1 mouse_genomes_project 16 18278442 18320031 - MGP_CBAJ_P0043281 Klhl6 protein_coding protein_coding MGP_CBAJ_T0043282.1 MGP_CBAJ_G0022338.1 mouse_genomes_project 16 18291825 18301195 - Klhl6 protein_coding retained_intron MGP_CBAJ_T0043283.1 MGP_CBAJ_G0022338.1 mouse_genomes_project 16 18291845 18320001 - MGP_CBAJ_P0043283 Klhl6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043284.1 MGP_CBAJ_G0022338.1 mouse_genomes_project 16 18300919 18319924 - MGP_CBAJ_P0043284 Klhl6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044362.1 MGP_CBAJ_G0022605.1 mouse_genomes_project 16 61618028 61641212 - MGP_CBAJ_P0044362 St3gal6 protein_coding protein_coding MGP_CBAJ_T0044363.1 MGP_CBAJ_G0022605.1 mouse_genomes_project 16 61623217 61679958 - St3gal6 protein_coding processed_transcript MGP_CBAJ_T0044364.1 MGP_CBAJ_G0022605.1 mouse_genomes_project 16 61633861 61636866 - St3gal6 protein_coding retained_intron MGP_CBAJ_T0044365.1 MGP_CBAJ_G0022605.1 mouse_genomes_project 16 61636357 61679849 - St3gal6 protein_coding processed_transcript MGP_CBAJ_T0044366.1 MGP_CBAJ_G0022605.1 mouse_genomes_project 16 61636370 61680574 - MGP_CBAJ_P0044366 St3gal6 protein_coding protein_coding MGP_CBAJ_T0044367.1 MGP_CBAJ_G0022605.1 mouse_genomes_project 16 61641134 61680574 - MGP_CBAJ_P0044367 St3gal6 protein_coding protein_coding MGP_CBAJ_T0044368.1 MGP_CBAJ_G0022605.1 mouse_genomes_project 16 61641186 61647948 - St3gal6 protein_coding processed_transcript MGP_CBAJ_T0044369.1 MGP_CBAJ_G0022605.1 mouse_genomes_project 16 61641188 61679749 - St3gal6 protein_coding processed_transcript MGP_CBAJ_T0044370.1 MGP_CBAJ_G0022605.1 mouse_genomes_project 16 61641197 61680539 - St3gal6 protein_coding processed_transcript MGP_CBAJ_T0044371.1 MGP_CBAJ_G0022605.1 mouse_genomes_project 16 61641197 61680129 - St3gal6 protein_coding processed_transcript MGP_CBAJ_T0044372.1 MGP_CBAJ_G0022605.1 mouse_genomes_project 16 61651471 61680163 - St3gal6 protein_coding processed_transcript MGP_CBAJ_T0044373.1 MGP_CBAJ_G0022605.1 mouse_genomes_project 16 61651471 61656516 - St3gal6 protein_coding retained_intron MGP_CBAJ_T0042494.1 MGP_CBAJ_G0022154.1 mouse_genomes_project 16 400628 408132 - Zfp597 protein_coding processed_transcript MGP_CBAJ_T0042495.1 MGP_CBAJ_G0022154.1 mouse_genomes_project 16 403835 416995 - MGP_CBAJ_P0042495 Zfp597 protein_coding protein_coding MGP_CBAJ_T0042496.1 MGP_CBAJ_G0022154.1 mouse_genomes_project 16 404691 431671 - Zfp597 protein_coding processed_transcript MGP_CBAJ_T0042497.1 MGP_CBAJ_G0022154.1 mouse_genomes_project 16 407597 431727 - Zfp597 protein_coding processed_transcript MGP_CBAJ_T0042498.1 MGP_CBAJ_G0022154.1 mouse_genomes_project 16 408896 416332 - Zfp597 protein_coding retained_intron MGP_CBAJ_T0044975.1 MGP_CBAJ_G0022786.1 mouse_genomes_project 16 105259637 105280965 - MGP_CBAJ_P0044975 Itgb2l protein_coding protein_coding MGP_CBAJ_T0044976.1 MGP_CBAJ_G0022786.1 mouse_genomes_project 16 105259641 105280960 - MGP_CBAJ_P0044976 Itgb2l protein_coding nonsense_mediated_decay MGP_CBAJ_T0044977.1 MGP_CBAJ_G0022786.1 mouse_genomes_project 16 105259725 105280958 - MGP_CBAJ_P0044977 Itgb2l protein_coding protein_coding MGP_CBAJ_T0044978.1 MGP_CBAJ_G0022786.1 mouse_genomes_project 16 105264079 105266494 - Itgb2l protein_coding processed_transcript MGP_CBAJ_T0043783.1 MGP_CBAJ_G0022455.1 mouse_genomes_project 16 33317880 33393729 + MGP_CBAJ_P0043783 Osbpl11 protein_coding protein_coding MGP_CBAJ_T0010005.1 MGP_CBAJ_G0008143.1 mouse_genomes_project 16 19042183 19042268 + Mir1224 miRNA miRNA MGP_CBAJ_T0098978.1 MGP_CBAJ_G0037233.1 mouse_genomes_project 16 97207077 97207182 - Gm23655 snRNA snRNA MGP_CBAJ_T0044200.1 MGP_CBAJ_G0022559.1 mouse_genomes_project 16 47445302 47460786 - MGP_CBAJ_P0044200 Abhd10 protein_coding protein_coding MGP_CBAJ_T0044201.1 MGP_CBAJ_G0022559.1 mouse_genomes_project 16 47447128 47460733 - MGP_CBAJ_P0044201 Abhd10 protein_coding protein_coding MGP_CBAJ_T0044202.1 MGP_CBAJ_G0022559.1 mouse_genomes_project 16 47454804 47460716 - Abhd10 protein_coding processed_transcript MGP_CBAJ_T0044203.1 MGP_CBAJ_G0022559.1 mouse_genomes_project 16 47458176 47460738 - Abhd10 protein_coding processed_transcript MGP_CBAJ_T0044204.1 MGP_CBAJ_G0022559.1 mouse_genomes_project 16 47458683 47460731 - Abhd10 protein_coding processed_transcript MGP_CBAJ_T0044037.1 MGP_CBAJ_G0022523.1 mouse_genomes_project 16 39839269 39873501 - MGP_CBAJ_P0044037 Upk1b protein_coding protein_coding MGP_CBAJ_T0012999.1 MGP_CBAJ_G0011111.1 mouse_genomes_project 16 39893355 39893749 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0044812.1 MGP_CBAJ_G0022760.1 mouse_genomes_project 16 101999639 102032148 - MGP_CBAJ_P0044812 Setd4 protein_coding unknown_likely_coding MGP_CBAJ_T0044813.1 MGP_CBAJ_G0022760.1 mouse_genomes_project 16 101999641 102031898 - Setd4 protein_coding retained_intron MGP_CBAJ_T0044814.1 MGP_CBAJ_G0022760.1 mouse_genomes_project 16 101999642 102004851 - Setd4 protein_coding processed_transcript MGP_CBAJ_T0044815.1 MGP_CBAJ_G0022760.1 mouse_genomes_project 16 101999644 102011190 - Setd4 protein_coding retained_intron MGP_CBAJ_T0044816.1 MGP_CBAJ_G0022760.1 mouse_genomes_project 16 102013064 102025384 - Setd4 protein_coding processed_transcript MGP_CBAJ_T0044817.1 MGP_CBAJ_G0022760.1 mouse_genomes_project 16 102013196 102032171 - Setd4 protein_coding processed_transcript MGP_CBAJ_T0044818.1 MGP_CBAJ_G0022760.1 mouse_genomes_project 16 102029595 102031922 - Setd4 protein_coding processed_transcript MGP_CBAJ_T0043866.1 MGP_CBAJ_G0022477.1 mouse_genomes_project 16 36502183 36531576 + Kpna1 protein_coding retained_intron MGP_CBAJ_T0043867.1 MGP_CBAJ_G0022477.1 mouse_genomes_project 16 36507640 36567227 + MGP_CBAJ_P0043867 Kpna1 protein_coding protein_coding MGP_CBAJ_T0043868.1 MGP_CBAJ_G0022477.1 mouse_genomes_project 16 36507650 36533362 + Kpna1 protein_coding retained_intron MGP_CBAJ_T0043869.1 MGP_CBAJ_G0022477.1 mouse_genomes_project 16 36507679 36549769 + MGP_CBAJ_P0043869 Kpna1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043870.1 MGP_CBAJ_G0022477.1 mouse_genomes_project 16 36507907 36543385 + MGP_CBAJ_P0043870 Kpna1 protein_coding protein_coding MGP_CBAJ_T0043871.1 MGP_CBAJ_G0022477.1 mouse_genomes_project 16 36528275 36564001 + MGP_CBAJ_P0043871 Kpna1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043872.1 MGP_CBAJ_G0022477.1 mouse_genomes_project 16 36528341 36552127 + MGP_CBAJ_P0043872 Kpna1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043873.1 MGP_CBAJ_G0022477.1 mouse_genomes_project 16 36544268 36565225 + MGP_CBAJ_P0043873 Kpna1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043874.1 MGP_CBAJ_G0022477.1 mouse_genomes_project 16 36549868 36563961 + MGP_CBAJ_P0043874 Kpna1 protein_coding protein_coding MGP_CBAJ_T0043875.1 MGP_CBAJ_G0022477.1 mouse_genomes_project 16 36552125 36561853 + Kpna1 protein_coding retained_intron MGP_CBAJ_T0045004.1 MGP_CBAJ_G0022796.1 mouse_genomes_project 16 106965190 106980379 - MGP_CBAJ_P0045004 Zbtb21 protein_coding protein_coding MGP_CBAJ_T0045005.1 MGP_CBAJ_G0022796.1 mouse_genomes_project 16 106965190 106980379 - MGP_CBAJ_P0045005 Zbtb21 protein_coding protein_coding MGP_CBAJ_T0045006.1 MGP_CBAJ_G0022796.1 mouse_genomes_project 16 106965190 106980379 - MGP_CBAJ_P0045006 Zbtb21 protein_coding protein_coding MGP_CBAJ_T0010033.1 MGP_CBAJ_G0008171.1 mouse_genomes_project 16 79937446 79937524 - Mir691 miRNA miRNA MGP_CBAJ_T0000130.1 MGP_CBAJ_G0000099.1 mouse_genomes_project 16 17560567 17561051 - MGP_CBAJ_P0000130 Iglv3 IG_V_gene IG_V_gene MGP_CBAJ_T0006750.1 MGP_CBAJ_G0005562.1 mouse_genomes_project 16 35951032 35957621 - 1600019K03Rik lincRNA lincRNA MGP_CBAJ_T0043787.1 MGP_CBAJ_G0022458.1 mouse_genomes_project 16 33725687 33885098 + MGP_CBAJ_P0043787 Slc12a8 protein_coding protein_coding MGP_CBAJ_T0043788.1 MGP_CBAJ_G0022458.1 mouse_genomes_project 16 33726637 33884935 + MGP_CBAJ_P0043788 Slc12a8 protein_coding protein_coding MGP_CBAJ_T0043789.1 MGP_CBAJ_G0022458.1 mouse_genomes_project 16 33726688 33885825 + MGP_CBAJ_P0043789 Slc12a8 protein_coding protein_coding MGP_CBAJ_T0043790.1 MGP_CBAJ_G0022458.1 mouse_genomes_project 16 33726895 33885098 + MGP_CBAJ_P0043790 Slc12a8 protein_coding protein_coding MGP_CBAJ_T0043791.1 MGP_CBAJ_G0022458.1 mouse_genomes_project 16 33808720 33885825 + MGP_CBAJ_P0043791 Slc12a8 protein_coding protein_coding MGP_CBAJ_T0043792.1 MGP_CBAJ_G0022458.1 mouse_genomes_project 16 33808785 33885096 + MGP_CBAJ_P0043792 Slc12a8 protein_coding protein_coding MGP_CBAJ_T0043793.1 MGP_CBAJ_G0022458.1 mouse_genomes_project 16 33831126 33841277 + Slc12a8 protein_coding processed_transcript MGP_CBAJ_T0044494.1 MGP_CBAJ_G0022657.1 mouse_genomes_project 16 81686679 81742609 - MGP_CBAJ_P0044494 Samsn1 protein_coding protein_coding MGP_CBAJ_T0044495.1 MGP_CBAJ_G0022657.1 mouse_genomes_project 16 81686680 81872663 - MGP_CBAJ_P0044495 Samsn1 protein_coding protein_coding MGP_CBAJ_T0044496.1 MGP_CBAJ_G0022657.1 mouse_genomes_project 16 81711531 81742539 - Samsn1 protein_coding retained_intron MGP_CBAJ_T0044497.1 MGP_CBAJ_G0022657.1 mouse_genomes_project 16 81712623 81742609 - Samsn1 protein_coding retained_intron MGP_CBAJ_T0044498.1 MGP_CBAJ_G0022657.1 mouse_genomes_project 16 81718692 81742578 - Samsn1 protein_coding retained_intron MGP_CBAJ_T0006745.1 MGP_CBAJ_G0005557.1 mouse_genomes_project 16 29564614 29609736 - Gm26569 lincRNA lincRNA MGP_CBAJ_T0044486.1 MGP_CBAJ_G0022654.1 mouse_genomes_project 16 81329400 81372745 - MGP_CBAJ_P0044486 Lipi protein_coding protein_coding MGP_CBAJ_T0044487.1 MGP_CBAJ_G0022654.1 mouse_genomes_project 16 81329430 81356821 - Lipi protein_coding processed_transcript MGP_CBAJ_T0098491.1 MGP_CBAJ_G0036748.1 mouse_genomes_project 16 100701287 100722299 + 2410124H12Rik sense_overlapping sense_overlapping MGP_CBAJ_T0006780.1 MGP_CBAJ_G0005582.1 mouse_genomes_project 16 99359676 99369156 - Gm15966 lincRNA lincRNA MGP_CBAJ_T0006781.1 MGP_CBAJ_G0005582.1 mouse_genomes_project 16 99359901 99365871 - Gm15966 lincRNA lincRNA MGP_CBAJ_T0042528.1 MGP_CBAJ_G0022160.1 mouse_genomes_project 16 540935 550937 - MGP_CBAJ_P0042528 Slx4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042529.1 MGP_CBAJ_G0022160.1 mouse_genomes_project 16 540953 567481 - MGP_CBAJ_P0042529 Slx4 protein_coding protein_coding MGP_CBAJ_T0042530.1 MGP_CBAJ_G0022160.1 mouse_genomes_project 16 540954 559384 - MGP_CBAJ_P0042530 Slx4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042531.1 MGP_CBAJ_G0022160.1 mouse_genomes_project 16 540958 547350 - Slx4 protein_coding retained_intron MGP_CBAJ_T0042532.1 MGP_CBAJ_G0022160.1 mouse_genomes_project 16 540963 544035 - Slx4 protein_coding retained_intron MGP_CBAJ_T0042533.1 MGP_CBAJ_G0022160.1 mouse_genomes_project 16 558433 567053 - MGP_CBAJ_P0042533 Slx4 protein_coding protein_coding MGP_CBAJ_T0042534.1 MGP_CBAJ_G0022160.1 mouse_genomes_project 16 566803 569571 - MGP_CBAJ_P0042534 Slx4 protein_coding protein_coding MGP_CBAJ_T0042535.1 MGP_CBAJ_G0022160.1 mouse_genomes_project 16 567001 569553 - MGP_CBAJ_P0042535 Slx4 protein_coding protein_coding MGP_CBAJ_T0100212.1 MGP_CBAJ_G0038467.1 mouse_genomes_project 16 39205669 39205798 - Gm27931 snoRNA snoRNA MGP_CBAJ_T0043289.1 MGP_CBAJ_G0022341.1 mouse_genomes_project 16 18605073 18613767 - MGP_CBAJ_P0043289 Map6d1 protein_coding protein_coding MGP_CBAJ_T0044590.1 MGP_CBAJ_G0022689.1 mouse_genomes_project 16 96321117 96321763 - MGP_CBAJ_P0044590 Krtap27-1 protein_coding protein_coding MGP_CBAJ_T0000927.1 MGP_CBAJ_G0000861.1 mouse_genomes_project 16 83405008 83405660 + TEC TEC MGP_CBAJ_T0042813.1 MGP_CBAJ_G0022231.1 mouse_genomes_project 16 10673396 10717851 + MGP_CBAJ_P0042813 Ercc4 protein_coding protein_coding MGP_CBAJ_T0042814.1 MGP_CBAJ_G0022231.1 mouse_genomes_project 16 10673629 10689923 + Ercc4 protein_coding retained_intron MGP_CBAJ_T0042815.1 MGP_CBAJ_G0022231.1 mouse_genomes_project 16 10673647 10693704 + MGP_CBAJ_P0042815 Ercc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042816.1 MGP_CBAJ_G0022231.1 mouse_genomes_project 16 10677909 10719734 + MGP_CBAJ_P0042816 Ercc4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042817.1 MGP_CBAJ_G0022231.1 mouse_genomes_project 16 10700477 10711122 + Ercc4 protein_coding processed_transcript MGP_CBAJ_T0044910.1 MGP_CBAJ_G0022776.1 mouse_genomes_project 16 103997171 104180852 - MGP_CBAJ_P0044910 Erg protein_coding protein_coding MGP_CBAJ_T0044911.1 MGP_CBAJ_G0022776.1 mouse_genomes_project 16 103997175 104112259 - MGP_CBAJ_P0044911 Erg protein_coding protein_coding MGP_CBAJ_T0044912.1 MGP_CBAJ_G0022776.1 mouse_genomes_project 16 103998154 104250944 - MGP_CBAJ_P0044912 Erg protein_coding protein_coding MGP_CBAJ_T0044913.1 MGP_CBAJ_G0022776.1 mouse_genomes_project 16 103998154 104180852 - MGP_CBAJ_P0044913 Erg protein_coding protein_coding MGP_CBAJ_T0044914.1 MGP_CBAJ_G0022776.1 mouse_genomes_project 16 103998286 104112304 - MGP_CBAJ_P0044914 Erg protein_coding protein_coding MGP_CBAJ_T0044915.1 MGP_CBAJ_G0022776.1 mouse_genomes_project 16 103998589 104175120 - MGP_CBAJ_P0044915 Erg protein_coding protein_coding MGP_CBAJ_T0044916.1 MGP_CBAJ_G0022776.1 mouse_genomes_project 16 103998749 104112201 - MGP_CBAJ_P0044916 Erg protein_coding protein_coding MGP_CBAJ_T0044917.1 MGP_CBAJ_G0022776.1 mouse_genomes_project 16 103998749 104180810 - MGP_CBAJ_P0044917 Erg protein_coding protein_coding MGP_CBAJ_T0044918.1 MGP_CBAJ_G0022776.1 mouse_genomes_project 16 103998749 104112201 - MGP_CBAJ_P0044918 Erg protein_coding protein_coding MGP_CBAJ_T0000936.1 MGP_CBAJ_G0000869.1 mouse_genomes_project 16 83600995 83604111 + TEC TEC MGP_CBAJ_T0043564.1 MGP_CBAJ_G0022407.1 mouse_genomes_project 16 28996632 29059486 - MGP_CBAJ_P0043564 Atp13a4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043565.1 MGP_CBAJ_G0022407.1 mouse_genomes_project 16 28996807 29151955 - MGP_CBAJ_P0043565 Atp13a4 protein_coding protein_coding MGP_CBAJ_T0043566.1 MGP_CBAJ_G0022407.1 mouse_genomes_project 16 28996819 29151841 - MGP_CBAJ_P0043566 Atp13a4 protein_coding protein_coding MGP_CBAJ_T0043567.1 MGP_CBAJ_G0022407.1 mouse_genomes_project 16 28996825 29013913 - Atp13a4 protein_coding processed_transcript MGP_CBAJ_T0043568.1 MGP_CBAJ_G0022407.1 mouse_genomes_project 16 28996865 29155181 - MGP_CBAJ_P0043568 Atp13a4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043569.1 MGP_CBAJ_G0022407.1 mouse_genomes_project 16 28997191 29010725 - Atp13a4 protein_coding retained_intron MGP_CBAJ_T0043570.1 MGP_CBAJ_G0022407.1 mouse_genomes_project 16 29014255 29044371 - Atp13a4 protein_coding retained_intron MGP_CBAJ_T0043571.1 MGP_CBAJ_G0022407.1 mouse_genomes_project 16 29026323 29045408 - MGP_CBAJ_P0043571 Atp13a4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043572.1 MGP_CBAJ_G0022407.1 mouse_genomes_project 16 29026332 29155181 - MGP_CBAJ_P0043572 Atp13a4 protein_coding protein_coding MGP_CBAJ_T0043573.1 MGP_CBAJ_G0022407.1 mouse_genomes_project 16 29150783 29155115 - Atp13a4 protein_coding retained_intron MGP_CBAJ_T0043574.1 MGP_CBAJ_G0022407.1 mouse_genomes_project 16 29150836 29155176 - Atp13a4 protein_coding retained_intron MGP_CBAJ_T0010021.1 MGP_CBAJ_G0008159.1 mouse_genomes_project 16 45334104 45334221 + Gm25996 miRNA miRNA MGP_CBAJ_T0044307.1 MGP_CBAJ_G0022590.1 mouse_genomes_project 16 58962235 58993494 + Senp7 protein_coding processed_transcript MGP_CBAJ_T0044308.1 MGP_CBAJ_G0022590.1 mouse_genomes_project 16 58992472 58994215 + Senp7 protein_coding processed_transcript MGP_CBAJ_T0044309.1 MGP_CBAJ_G0022590.1 mouse_genomes_project 16 58992477 59054990 + MGP_CBAJ_P0044309 Senp7 protein_coding protein_coding MGP_CBAJ_T0044310.1 MGP_CBAJ_G0022590.1 mouse_genomes_project 16 58992477 59131456 + MGP_CBAJ_P0044310 Senp7 protein_coding protein_coding MGP_CBAJ_T0044311.1 MGP_CBAJ_G0022590.1 mouse_genomes_project 16 58992532 59054985 + Senp7 protein_coding processed_transcript MGP_CBAJ_T0044312.1 MGP_CBAJ_G0022590.1 mouse_genomes_project 16 58992543 59024319 + Senp7 protein_coding retained_intron MGP_CBAJ_T0044313.1 MGP_CBAJ_G0022590.1 mouse_genomes_project 16 58992543 59071772 + MGP_CBAJ_P0044313 Senp7 protein_coding protein_coding MGP_CBAJ_T0044314.1 MGP_CBAJ_G0022590.1 mouse_genomes_project 16 58992548 59054866 + Senp7 protein_coding processed_transcript MGP_CBAJ_T0044315.1 MGP_CBAJ_G0022590.1 mouse_genomes_project 16 58992548 59074660 + MGP_CBAJ_P0044315 Senp7 protein_coding protein_coding MGP_CBAJ_T0044316.1 MGP_CBAJ_G0022590.1 mouse_genomes_project 16 58992607 59129822 + MGP_CBAJ_P0044316 Senp7 protein_coding protein_coding MGP_CBAJ_T0044317.1 MGP_CBAJ_G0022590.1 mouse_genomes_project 16 59118844 59130180 + Senp7 protein_coding retained_intron MGP_CBAJ_T0044318.1 MGP_CBAJ_G0022590.1 mouse_genomes_project 16 59119317 59129789 + Senp7 protein_coding retained_intron MGP_CBAJ_T0044319.1 MGP_CBAJ_G0022590.1 mouse_genomes_project 16 59121247 59131428 + Senp7 protein_coding processed_transcript MGP_CBAJ_T0044320.1 MGP_CBAJ_G0022590.1 mouse_genomes_project 16 59122425 59129694 + Senp7 protein_coding processed_transcript MGP_CBAJ_T0044321.1 MGP_CBAJ_G0022590.1 mouse_genomes_project 16 59127561 59130169 + Senp7 protein_coding processed_transcript MGP_CBAJ_T0098963.1 MGP_CBAJ_G0037218.1 mouse_genomes_project 16 44618349 44618456 + Gm25873 snRNA snRNA MGP_CBAJ_T0042613.1 MGP_CBAJ_G0022176.1 mouse_genomes_project 16 1510179 1530552 + MGP_CBAJ_P0042613 4930562C15Rik protein_coding non_stop_decay MGP_CBAJ_T0042614.1 MGP_CBAJ_G0022176.1 mouse_genomes_project 16 1510179 1546660 + MGP_CBAJ_P0042614 4930562C15Rik protein_coding protein_coding MGP_CBAJ_T0042615.1 MGP_CBAJ_G0022176.1 mouse_genomes_project 16 1515869 1530558 + MGP_CBAJ_P0042615 4930562C15Rik protein_coding non_stop_decay MGP_CBAJ_T0042616.1 MGP_CBAJ_G0022176.1 mouse_genomes_project 16 1529163 1540227 + MGP_CBAJ_P0042616 4930562C15Rik protein_coding protein_coding MGP_CBAJ_T0042617.1 MGP_CBAJ_G0022176.1 mouse_genomes_project 16 1540737 1546318 + MGP_CBAJ_P0042617 4930562C15Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0042618.1 MGP_CBAJ_G0022176.1 mouse_genomes_project 16 1543291 1544147 + 4930562C15Rik protein_coding retained_intron MGP_CBAJ_T0043435.1 MGP_CBAJ_G0022366.1 mouse_genomes_project 16 20619737 20627723 - MGP_CBAJ_P0043435 Tmem41a protein_coding protein_coding MGP_CBAJ_T0043984.1 MGP_CBAJ_G0022507.1 mouse_genomes_project 16 38824009 38852196 + MGP_CBAJ_P0043984 Lrrc58 protein_coding protein_coding MGP_CBAJ_T0044345.1 MGP_CBAJ_G0022599.1 mouse_genomes_project 16 60228246 60290701 - MGP_CBAJ_P0044345 Tbc1d23 protein_coding unknown_likely_coding MGP_CBAJ_T0044346.1 MGP_CBAJ_G0022599.1 mouse_genomes_project 16 60228251 60290801 - MGP_CBAJ_P0044346 Tbc1d23 protein_coding protein_coding MGP_CBAJ_T0044235.1 MGP_CBAJ_G0022569.1 mouse_genomes_project 16 50715425 50749805 - MGP_CBAJ_P0044235 Trat1 protein_coding protein_coding MGP_CBAJ_T0042745.1 MGP_CBAJ_G0022213.1 mouse_genomes_project 16 8110372 8112102 - MGP_CBAJ_P0042745 Socs1 protein_coding protein_coding MGP_CBAJ_T0043522.1 MGP_CBAJ_G0022393.1 mouse_genomes_project 16 24913637 25064566 + MGP_CBAJ_P0043522 Trp63 protein_coding protein_coding MGP_CBAJ_T0043523.1 MGP_CBAJ_G0022393.1 mouse_genomes_project 16 24913639 25136882 + MGP_CBAJ_P0043523 Trp63 protein_coding protein_coding MGP_CBAJ_T0043524.1 MGP_CBAJ_G0022393.1 mouse_genomes_project 16 24913639 25136897 + MGP_CBAJ_P0043524 Trp63 protein_coding protein_coding MGP_CBAJ_T0043525.1 MGP_CBAJ_G0022393.1 mouse_genomes_project 16 24913639 25121939 + MGP_CBAJ_P0043525 Trp63 protein_coding protein_coding MGP_CBAJ_T0043526.1 MGP_CBAJ_G0022393.1 mouse_genomes_project 16 25042723 25136897 + MGP_CBAJ_P0043526 Trp63 protein_coding protein_coding MGP_CBAJ_T0043527.1 MGP_CBAJ_G0022393.1 mouse_genomes_project 16 25042723 25121939 + MGP_CBAJ_P0043527 Trp63 protein_coding protein_coding MGP_CBAJ_T0043528.1 MGP_CBAJ_G0022393.1 mouse_genomes_project 16 25042723 25112655 + MGP_CBAJ_P0043528 Trp63 protein_coding protein_coding MGP_CBAJ_T0043529.1 MGP_CBAJ_G0022393.1 mouse_genomes_project 16 25042723 25136897 + MGP_CBAJ_P0043529 Trp63 protein_coding protein_coding MGP_CBAJ_T0006754.1 MGP_CBAJ_G0005566.1 mouse_genomes_project 16 44925863 44935533 - Gm15713 lincRNA lincRNA MGP_CBAJ_T0000943.1 MGP_CBAJ_G0000876.1 mouse_genomes_project 16 104457172 104458007 + TEC TEC MGP_CBAJ_T0044707.1 MGP_CBAJ_G0022741.1 mouse_genomes_project 16 99564436 99592463 + MGP_CBAJ_P0044707 Ifnar1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044708.1 MGP_CBAJ_G0022741.1 mouse_genomes_project 16 99564464 99571684 + Ifnar1 protein_coding retained_intron MGP_CBAJ_T0044709.1 MGP_CBAJ_G0022741.1 mouse_genomes_project 16 99564523 99577387 + MGP_CBAJ_P0044709 Ifnar1 protein_coding protein_coding MGP_CBAJ_T0044710.1 MGP_CBAJ_G0022741.1 mouse_genomes_project 16 99564531 99592462 + MGP_CBAJ_P0044710 Ifnar1 protein_coding protein_coding MGP_CBAJ_T0044188.1 MGP_CBAJ_G0022554.1 mouse_genomes_project 16 47232648 47316538 + MGP_CBAJ_P0044188 Slc9c1 protein_coding protein_coding MGP_CBAJ_T0044189.1 MGP_CBAJ_G0022554.1 mouse_genomes_project 16 47237004 47316423 + MGP_CBAJ_P0044189 Slc9c1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044190.1 MGP_CBAJ_G0022554.1 mouse_genomes_project 16 47237004 47316423 + MGP_CBAJ_P0044190 Slc9c1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0010003.1 MGP_CBAJ_G0008141.1 mouse_genomes_project 16 17640988 17641098 + Gm23612 miRNA miRNA MGP_CBAJ_T0009991.1 MGP_CBAJ_G0008129.1 mouse_genomes_project 16 11053392 11053479 + Mir365-1 miRNA miRNA MGP_CBAJ_T0042734.1 MGP_CBAJ_G0022212.1 mouse_genomes_project 16 7831311 8056279 + MGP_CBAJ_P0042734 Clec16a protein_coding protein_coding MGP_CBAJ_T0042735.1 MGP_CBAJ_G0022212.1 mouse_genomes_project 16 7831311 8056279 + MGP_CBAJ_P0042735 Clec16a protein_coding protein_coding MGP_CBAJ_T0042736.1 MGP_CBAJ_G0022212.1 mouse_genomes_project 16 7831336 8056279 + MGP_CBAJ_P0042736 Clec16a protein_coding protein_coding MGP_CBAJ_T0042737.1 MGP_CBAJ_G0022212.1 mouse_genomes_project 16 7831349 7849861 + Clec16a protein_coding processed_transcript MGP_CBAJ_T0042738.1 MGP_CBAJ_G0022212.1 mouse_genomes_project 16 7831370 8021049 + MGP_CBAJ_P0042738 Clec16a protein_coding protein_coding MGP_CBAJ_T0042739.1 MGP_CBAJ_G0022212.1 mouse_genomes_project 16 7831381 8043223 + MGP_CBAJ_P0042739 Clec16a protein_coding nonsense_mediated_decay MGP_CBAJ_T0042740.1 MGP_CBAJ_G0022212.1 mouse_genomes_project 16 7831381 7845716 + MGP_CBAJ_P0042740 Clec16a protein_coding protein_coding MGP_CBAJ_T0042741.1 MGP_CBAJ_G0022212.1 mouse_genomes_project 16 7831381 7992443 + MGP_CBAJ_P0042741 Clec16a protein_coding protein_coding MGP_CBAJ_T0042742.1 MGP_CBAJ_G0022212.1 mouse_genomes_project 16 7886571 8043864 + MGP_CBAJ_P0042742 Clec16a protein_coding protein_coding MGP_CBAJ_T0042743.1 MGP_CBAJ_G0022212.1 mouse_genomes_project 16 7900009 7919638 + Clec16a protein_coding processed_transcript MGP_CBAJ_T0042744.1 MGP_CBAJ_G0022212.1 mouse_genomes_project 16 7918892 7928415 + Clec16a protein_coding processed_transcript MGP_CBAJ_T0044406.1 MGP_CBAJ_G0022623.1 mouse_genomes_project 16 62415063 62415992 - MGP_CBAJ_P0044406 Olfr196 protein_coding protein_coding MGP_CBAJ_T0097975.1 MGP_CBAJ_G0036248.1 mouse_genomes_project 16 42501592 42501684 + Gm26381 rRNA rRNA MGP_CBAJ_T0042824.1 MGP_CBAJ_G0022235.1 mouse_genomes_project 16 11307644 11314340 + MGP_CBAJ_P0042824 3110001I22Rik protein_coding protein_coding MGP_CBAJ_T0042587.1 MGP_CBAJ_G0022171.1 mouse_genomes_project 16 1282407 1293284 + MGP_CBAJ_P0042587 Vasn protein_coding protein_coding MGP_CBAJ_T0042588.1 MGP_CBAJ_G0022171.1 mouse_genomes_project 16 1282434 1290041 + Vasn protein_coding processed_transcript MGP_CBAJ_T0017247.1 MGP_CBAJ_G0015064.1 mouse_genomes_project 16 71114726 71122236 + 1700010K23Rik processed_transcript processed_transcript MGP_CBAJ_T0101670.1 MGP_CBAJ_G0039701.1 mouse_genomes_project 16 120964 121904 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0043407.1 MGP_CBAJ_G0022357.1 mouse_genomes_project 16 19174449 19180117 + MGP_CBAJ_P0043407 Polr2h protein_coding protein_coding MGP_CBAJ_T0043408.1 MGP_CBAJ_G0022357.1 mouse_genomes_project 16 19174956 19179857 + Polr2h protein_coding processed_transcript MGP_CBAJ_T0044071.1 MGP_CBAJ_G0022530.1 mouse_genomes_project 16 45296806 45359066 + MGP_CBAJ_P0044071 Drd3 protein_coding protein_coding MGP_CBAJ_T0006728.1 MGP_CBAJ_G0005543.1 mouse_genomes_project 16 8545589 8565107 + 4930509G22Rik lincRNA lincRNA MGP_CBAJ_T0043621.1 MGP_CBAJ_G0022420.1 mouse_genomes_project 16 31087198 31115129 - MGP_CBAJ_P0043621 Ppp1r2 protein_coding protein_coding MGP_CBAJ_T0043622.1 MGP_CBAJ_G0022420.1 mouse_genomes_project 16 31097828 31114844 - MGP_CBAJ_P0043622 Ppp1r2 protein_coding protein_coding MGP_CBAJ_T0098932.1 MGP_CBAJ_G0037187.1 mouse_genomes_project 16 1770969 1771077 - Gm23483 snRNA snRNA MGP_CBAJ_T0043024.1 MGP_CBAJ_G0022279.1 mouse_genomes_project 16 15325921 15453817 - MGP_CBAJ_P0043024 Pi4ka protein_coding protein_coding MGP_CBAJ_T0043025.1 MGP_CBAJ_G0022279.1 mouse_genomes_project 16 15325922 15327211 - Pi4ka protein_coding retained_intron MGP_CBAJ_T0043026.1 MGP_CBAJ_G0022279.1 mouse_genomes_project 16 15325922 15330529 - Pi4ka protein_coding retained_intron MGP_CBAJ_T0043027.1 MGP_CBAJ_G0022279.1 mouse_genomes_project 16 15325922 15354889 - MGP_CBAJ_P0043027 Pi4ka protein_coding protein_coding MGP_CBAJ_T0043028.1 MGP_CBAJ_G0022279.1 mouse_genomes_project 16 15325922 15453396 - MGP_CBAJ_P0043028 Pi4ka protein_coding protein_coding MGP_CBAJ_T0043029.1 MGP_CBAJ_G0022279.1 mouse_genomes_project 16 15325923 15327641 - Pi4ka protein_coding retained_intron MGP_CBAJ_T0043030.1 MGP_CBAJ_G0022279.1 mouse_genomes_project 16 15328387 15329691 - Pi4ka protein_coding retained_intron MGP_CBAJ_T0043031.1 MGP_CBAJ_G0022279.1 mouse_genomes_project 16 15344365 15354512 - MGP_CBAJ_P0043031 Pi4ka protein_coding nonsense_mediated_decay MGP_CBAJ_T0043032.1 MGP_CBAJ_G0022279.1 mouse_genomes_project 16 15355000 15372062 - MGP_CBAJ_P0043032 Pi4ka protein_coding nonsense_mediated_decay MGP_CBAJ_T0043033.1 MGP_CBAJ_G0022279.1 mouse_genomes_project 16 15359189 15397421 - MGP_CBAJ_P0043033 Pi4ka protein_coding protein_coding MGP_CBAJ_T0043034.1 MGP_CBAJ_G0022279.1 mouse_genomes_project 16 15369544 15397383 - Pi4ka protein_coding retained_intron MGP_CBAJ_T0043037.1 MGP_CBAJ_G0022279.1 mouse_genomes_project 16 15410920 15453396 - Pi4ka protein_coding retained_intron MGP_CBAJ_T0043039.1 MGP_CBAJ_G0022282.1 mouse_genomes_project 16 15509448 15543748 + MGP_CBAJ_P0043039 Crkl protein_coding protein_coding MGP_CBAJ_T0042768.1 MGP_CBAJ_G0022223.1 mouse_genomes_project 16 8504814 8543796 - MGP_CBAJ_P0042768 Zc3h7a protein_coding protein_coding MGP_CBAJ_T0042769.1 MGP_CBAJ_G0022223.1 mouse_genomes_project 16 8505348 8509101 - Zc3h7a protein_coding retained_intron MGP_CBAJ_T0042770.1 MGP_CBAJ_G0022223.1 mouse_genomes_project 16 8507265 8510123 - Zc3h7a protein_coding retained_intron MGP_CBAJ_T0042771.1 MGP_CBAJ_G0022223.1 mouse_genomes_project 16 8508924 8516223 - MGP_CBAJ_P0042771 Zc3h7a protein_coding nonsense_mediated_decay MGP_CBAJ_T0042772.1 MGP_CBAJ_G0022223.1 mouse_genomes_project 16 8509018 8543744 - MGP_CBAJ_P0042772 Zc3h7a protein_coding nonsense_mediated_decay MGP_CBAJ_T0042773.1 MGP_CBAJ_G0022223.1 mouse_genomes_project 16 8512869 8534058 - MGP_CBAJ_P0042773 Zc3h7a protein_coding unknown_likely_coding MGP_CBAJ_T0042774.1 MGP_CBAJ_G0022223.1 mouse_genomes_project 16 8512911 8543503 - MGP_CBAJ_P0042774 Zc3h7a protein_coding protein_coding MGP_CBAJ_T0042775.1 MGP_CBAJ_G0022223.1 mouse_genomes_project 16 8513097 8515071 - Zc3h7a protein_coding retained_intron MGP_CBAJ_T0042776.1 MGP_CBAJ_G0022223.1 mouse_genomes_project 16 8515072 8519117 - Zc3h7a protein_coding retained_intron MGP_CBAJ_T0042777.1 MGP_CBAJ_G0022223.1 mouse_genomes_project 16 8516225 8542376 - MGP_CBAJ_P0042777 Zc3h7a protein_coding protein_coding MGP_CBAJ_T0042778.1 MGP_CBAJ_G0022223.1 mouse_genomes_project 16 8517995 8518926 - Zc3h7a protein_coding retained_intron MGP_CBAJ_T0042779.1 MGP_CBAJ_G0022223.1 mouse_genomes_project 16 8518987 8520447 - Zc3h7a protein_coding retained_intron MGP_CBAJ_T0042780.1 MGP_CBAJ_G0022223.1 mouse_genomes_project 16 8519375 8523757 - Zc3h7a protein_coding retained_intron MGP_CBAJ_T0042781.1 MGP_CBAJ_G0022223.1 mouse_genomes_project 16 8520713 8526149 - Zc3h7a protein_coding retained_intron MGP_CBAJ_T0042782.1 MGP_CBAJ_G0022223.1 mouse_genomes_project 16 8521885 8526171 - Zc3h7a protein_coding retained_intron MGP_CBAJ_T0042783.1 MGP_CBAJ_G0022223.1 mouse_genomes_project 16 8524208 8542343 - MGP_CBAJ_P0042783 Zc3h7a protein_coding protein_coding MGP_CBAJ_T0042784.1 MGP_CBAJ_G0022223.1 mouse_genomes_project 16 8528442 8542968 - MGP_CBAJ_P0042784 Zc3h7a protein_coding protein_coding MGP_CBAJ_T0042785.1 MGP_CBAJ_G0022223.1 mouse_genomes_project 16 8528452 8543467 - MGP_CBAJ_P0042785 Zc3h7a protein_coding protein_coding MGP_CBAJ_T0042786.1 MGP_CBAJ_G0022223.1 mouse_genomes_project 16 8530857 8543745 - Zc3h7a protein_coding retained_intron MGP_CBAJ_T0043712.1 MGP_CBAJ_G0022445.1 mouse_genomes_project 16 32648023 32672242 + Tnk2 protein_coding processed_transcript MGP_CBAJ_T0043713.1 MGP_CBAJ_G0022445.1 mouse_genomes_project 16 32648440 32667843 + Tnk2 protein_coding processed_transcript MGP_CBAJ_T0043714.1 MGP_CBAJ_G0022445.1 mouse_genomes_project 16 32648792 32691707 + MGP_CBAJ_P0043714 Tnk2 protein_coding protein_coding MGP_CBAJ_T0043715.1 MGP_CBAJ_G0022445.1 mouse_genomes_project 16 32648792 32691707 + MGP_CBAJ_P0043715 Tnk2 protein_coding protein_coding MGP_CBAJ_T0043716.1 MGP_CBAJ_G0022445.1 mouse_genomes_project 16 32648822 32691707 + MGP_CBAJ_P0043716 Tnk2 protein_coding protein_coding MGP_CBAJ_T0043717.1 MGP_CBAJ_G0022445.1 mouse_genomes_project 16 32648975 32691706 + MGP_CBAJ_P0043717 Tnk2 protein_coding protein_coding MGP_CBAJ_T0043718.1 MGP_CBAJ_G0022445.1 mouse_genomes_project 16 32649108 32672255 + Tnk2 protein_coding processed_transcript MGP_CBAJ_T0043719.1 MGP_CBAJ_G0022445.1 mouse_genomes_project 16 32660979 32672234 + Tnk2 protein_coding processed_transcript MGP_CBAJ_T0043720.1 MGP_CBAJ_G0022445.1 mouse_genomes_project 16 32662887 32672226 + Tnk2 protein_coding processed_transcript MGP_CBAJ_T0043721.1 MGP_CBAJ_G0022445.1 mouse_genomes_project 16 32672202 32675627 + Tnk2 protein_coding processed_transcript MGP_CBAJ_T0043722.1 MGP_CBAJ_G0022445.1 mouse_genomes_project 16 32677146 32686743 + MGP_CBAJ_P0043722 Tnk2 protein_coding protein_coding MGP_CBAJ_T0043723.1 MGP_CBAJ_G0022445.1 mouse_genomes_project 16 32677148 32691707 + MGP_CBAJ_P0043723 Tnk2 protein_coding protein_coding MGP_CBAJ_T0043724.1 MGP_CBAJ_G0022445.1 mouse_genomes_project 16 32677170 32686957 + MGP_CBAJ_P0043724 Tnk2 protein_coding protein_coding MGP_CBAJ_T0043725.1 MGP_CBAJ_G0022445.1 mouse_genomes_project 16 32677184 32687410 + MGP_CBAJ_P0043725 Tnk2 protein_coding protein_coding MGP_CBAJ_T0043726.1 MGP_CBAJ_G0022445.1 mouse_genomes_project 16 32677187 32686338 + Tnk2 protein_coding retained_intron MGP_CBAJ_T0043727.1 MGP_CBAJ_G0022445.1 mouse_genomes_project 16 32677191 32687159 + MGP_CBAJ_P0043727 Tnk2 protein_coding protein_coding MGP_CBAJ_T0000129.1 MGP_CBAJ_G0000098.1 mouse_genomes_project 16 17375700 17376184 - MGP_CBAJ_P0000129 Iglv1 IG_V_gene IG_V_gene MGP_CBAJ_T0044194.1 MGP_CBAJ_G0022557.1 mouse_genomes_project 16 47367823 47407034 - MGP_CBAJ_P0044194 Tmprss7 protein_coding protein_coding MGP_CBAJ_T0044195.1 MGP_CBAJ_G0022557.1 mouse_genomes_project 16 47367825 47396781 - Tmprss7 protein_coding processed_transcript MGP_CBAJ_T0044196.1 MGP_CBAJ_G0022557.1 mouse_genomes_project 16 47367849 47402996 - Tmprss7 protein_coding processed_transcript MGP_CBAJ_T0044197.1 MGP_CBAJ_G0022557.1 mouse_genomes_project 16 47394813 47397900 - Tmprss7 protein_coding processed_transcript MGP_CBAJ_T0044198.1 MGP_CBAJ_G0022557.1 mouse_genomes_project 16 47394927 47397905 - Tmprss7 protein_coding retained_intron MGP_CBAJ_T0044331.1 MGP_CBAJ_G0022593.1 mouse_genomes_project 16 59699356 59728144 - MGP_CBAJ_P0044331 Tfg protein_coding protein_coding MGP_CBAJ_T0044332.1 MGP_CBAJ_G0022593.1 mouse_genomes_project 16 59699895 59716385 - MGP_CBAJ_P0044332 Tfg protein_coding protein_coding MGP_CBAJ_T0044333.1 MGP_CBAJ_G0022593.1 mouse_genomes_project 16 59699986 59715156 - MGP_CBAJ_P0044333 Tfg protein_coding protein_coding MGP_CBAJ_T0044334.1 MGP_CBAJ_G0022593.1 mouse_genomes_project 16 59714192 59728003 - MGP_CBAJ_P0044334 Tfg protein_coding protein_coding MGP_CBAJ_T0044335.1 MGP_CBAJ_G0022593.1 mouse_genomes_project 16 59715141 59723663 - MGP_CBAJ_P0044335 Tfg protein_coding protein_coding MGP_CBAJ_T0044336.1 MGP_CBAJ_G0022593.1 mouse_genomes_project 16 59715223 59728052 - MGP_CBAJ_P0044336 Tfg protein_coding protein_coding MGP_CBAJ_T0044337.1 MGP_CBAJ_G0022593.1 mouse_genomes_project 16 59716301 59727874 - MGP_CBAJ_P0044337 Tfg protein_coding protein_coding MGP_CBAJ_T0044412.1 MGP_CBAJ_G0022629.1 mouse_genomes_project 16 62650583 62652610 - MGP_CBAJ_P0044412 Olfr204 protein_coding protein_coding MGP_CBAJ_T0044378.1 MGP_CBAJ_G0022610.1 mouse_genomes_project 16 61908495 61914808 + MGP_CBAJ_P0044378 Cldnd1 protein_coding protein_coding MGP_CBAJ_T0044379.1 MGP_CBAJ_G0022610.1 mouse_genomes_project 16 61908510 61914167 + MGP_CBAJ_P0044379 Cldnd1 protein_coding protein_coding MGP_CBAJ_T0044380.1 MGP_CBAJ_G0022610.1 mouse_genomes_project 16 61908608 61913548 + MGP_CBAJ_P0044380 Cldnd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044381.1 MGP_CBAJ_G0022610.1 mouse_genomes_project 16 61908624 61913467 + Cldnd1 protein_coding processed_transcript MGP_CBAJ_T0044382.1 MGP_CBAJ_G0022610.1 mouse_genomes_project 16 61908633 61911965 + MGP_CBAJ_P0044382 Cldnd1 protein_coding protein_coding MGP_CBAJ_T0044383.1 MGP_CBAJ_G0022610.1 mouse_genomes_project 16 61912812 61913539 + Cldnd1 protein_coding retained_intron MGP_CBAJ_T0044989.1 MGP_CBAJ_G0022792.1 mouse_genomes_project 16 106540157 106596263 - MGP_CBAJ_P0044989 Tmprss2 protein_coding protein_coding MGP_CBAJ_T0003580.1 MGP_CBAJ_G0003242.1 mouse_genomes_project 16 12065539 12067726 + Gm15868 antisense antisense MGP_CBAJ_T0012968.1 MGP_CBAJ_G0011080.1 mouse_genomes_project 16 15788198 15788636 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100234.1 MGP_CBAJ_G0038489.1 mouse_genomes_project 16 91836675 91836802 + Gm26153 snoRNA snoRNA MGP_CBAJ_T0043133.1 MGP_CBAJ_G0022300.1 mouse_genomes_project 16 16015590 16017543 - MGP_CBAJ_P0043133 Gsc2 protein_coding protein_coding MGP_CBAJ_T0042918.1 MGP_CBAJ_G0022260.1 mouse_genomes_project 16 14320931 14478143 - MGP_CBAJ_P0042918 Fgd4 protein_coding protein_coding MGP_CBAJ_T0042919.1 MGP_CBAJ_G0022260.1 mouse_genomes_project 16 14327149 14528392 - MGP_CBAJ_P0042919 Fgd4 protein_coding protein_coding MGP_CBAJ_T0042920.1 MGP_CBAJ_G0022260.1 mouse_genomes_project 16 14327188 14440520 - MGP_CBAJ_P0042920 Fgd4 protein_coding protein_coding MGP_CBAJ_T0042921.1 MGP_CBAJ_G0022260.1 mouse_genomes_project 16 14345360 14477970 - Fgd4 protein_coding retained_intron MGP_CBAJ_T0042922.1 MGP_CBAJ_G0022260.1 mouse_genomes_project 16 14345360 14421422 - MGP_CBAJ_P0042922 Fgd4 protein_coding protein_coding MGP_CBAJ_T0042923.1 MGP_CBAJ_G0022260.1 mouse_genomes_project 16 14368028 14478135 - Fgd4 protein_coding retained_intron MGP_CBAJ_T0042924.1 MGP_CBAJ_G0022260.1 mouse_genomes_project 16 14369513 14478135 - Fgd4 protein_coding retained_intron MGP_CBAJ_T0042925.1 MGP_CBAJ_G0022260.1 mouse_genomes_project 16 14378889 14528963 - MGP_CBAJ_P0042925 Fgd4 protein_coding protein_coding MGP_CBAJ_T0042926.1 MGP_CBAJ_G0022260.1 mouse_genomes_project 16 14387691 14477914 - Fgd4 protein_coding retained_intron MGP_CBAJ_T0042927.1 MGP_CBAJ_G0022260.1 mouse_genomes_project 16 14397891 14528453 - Fgd4 protein_coding retained_intron MGP_CBAJ_T0042928.1 MGP_CBAJ_G0022260.1 mouse_genomes_project 16 14398870 14440520 - Fgd4 protein_coding retained_intron MGP_CBAJ_T0100200.1 MGP_CBAJ_G0038455.1 mouse_genomes_project 16 22025579 22025757 + Snora81 snoRNA snoRNA MGP_CBAJ_T0044006.1 MGP_CBAJ_G0022515.1 mouse_genomes_project 16 39419576 39459074 - MGP_CBAJ_P0044006 Pla1a protein_coding protein_coding MGP_CBAJ_T0000932.1 MGP_CBAJ_G0000865.1 mouse_genomes_project 16 83443280 83445850 - TEC TEC MGP_CBAJ_T0003623.1 MGP_CBAJ_G0003276.1 mouse_genomes_project 16 104869459 104875854 + 1700093J21Rik antisense antisense MGP_CBAJ_T0044375.1 MGP_CBAJ_G0022607.1 mouse_genomes_project 16 61806246 61809820 - MGP_CBAJ_P0044375 E330017A01Rik protein_coding protein_coding MGP_CBAJ_T0043836.1 MGP_CBAJ_G0022467.1 mouse_genomes_project 16 35413186 35521103 + MGP_CBAJ_P0043836 Hacd2 protein_coding protein_coding MGP_CBAJ_T0043654.1 MGP_CBAJ_G0022427.1 mouse_genomes_project 16 31856053 31865757 + MGP_CBAJ_P0043654 Ncbp2 protein_coding protein_coding MGP_CBAJ_T0043655.1 MGP_CBAJ_G0022427.1 mouse_genomes_project 16 31856141 31864419 + Ncbp2 protein_coding retained_intron MGP_CBAJ_T0043656.1 MGP_CBAJ_G0022427.1 mouse_genomes_project 16 31856146 31869076 + Ncbp2 protein_coding processed_transcript MGP_CBAJ_T0043657.1 MGP_CBAJ_G0022427.1 mouse_genomes_project 16 31856153 31864447 + MGP_CBAJ_P0043657 Ncbp2 protein_coding protein_coding MGP_CBAJ_T0098973.1 MGP_CBAJ_G0037228.1 mouse_genomes_project 16 78913789 78913956 - Gm25699 snRNA snRNA MGP_CBAJ_T0101668.1 MGP_CBAJ_G0039699.1 mouse_genomes_project 16 4079 4519 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010026.1 MGP_CBAJ_G0008164.1 mouse_genomes_project 16 58326600 58326657 + Mir5118 miRNA miRNA MGP_CBAJ_T0011283.1 MGP_CBAJ_G0009421.1 mouse_genomes_project 16 37302728 37303046 - Gm25902 misc_RNA misc_RNA MGP_CBAJ_T0043982.1 MGP_CBAJ_G0022506.1 mouse_genomes_project 16 38805740 38811254 - Gm36028 protein_coding retained_intron MGP_CBAJ_T0043983.1 MGP_CBAJ_G0022506.1 mouse_genomes_project 16 38805740 38815956 - MGP_CBAJ_P0043983 Gm36028 protein_coding protein_coding MGP_CBAJ_T0044082.1 MGP_CBAJ_G0022532.1 mouse_genomes_project 16 45424985 45516932 + MGP_CBAJ_P0044082 Ccdc191 protein_coding protein_coding MGP_CBAJ_T0044083.1 MGP_CBAJ_G0022532.1 mouse_genomes_project 16 45425084 45487990 + MGP_CBAJ_P0044083 Ccdc191 protein_coding protein_coding MGP_CBAJ_T0044084.1 MGP_CBAJ_G0022532.1 mouse_genomes_project 16 45425087 45516932 + MGP_CBAJ_P0044084 Ccdc191 protein_coding protein_coding MGP_CBAJ_T0044085.1 MGP_CBAJ_G0022532.1 mouse_genomes_project 16 45425125 45445755 + MGP_CBAJ_P0044085 Ccdc191 protein_coding protein_coding MGP_CBAJ_T0044086.1 MGP_CBAJ_G0022532.1 mouse_genomes_project 16 45487425 45493094 + Ccdc191 protein_coding processed_transcript MGP_CBAJ_T0044087.1 MGP_CBAJ_G0022532.1 mouse_genomes_project 16 45487546 45516932 + MGP_CBAJ_P0044087 Ccdc191 protein_coding protein_coding MGP_CBAJ_T0044271.1 MGP_CBAJ_G0022579.1 mouse_genomes_project 16 52787408 52788704 - MGP_CBAJ_P0044271 Ccdc54 protein_coding protein_coding MGP_CBAJ_T0044695.1 MGP_CBAJ_G0022738.1 mouse_genomes_project 16 99417434 99459801 + MGP_CBAJ_P0044695 Ifnar2 protein_coding protein_coding MGP_CBAJ_T0044696.1 MGP_CBAJ_G0022738.1 mouse_genomes_project 16 99417492 99443144 + MGP_CBAJ_P0044696 Ifnar2 protein_coding protein_coding MGP_CBAJ_T0044697.1 MGP_CBAJ_G0022738.1 mouse_genomes_project 16 99417501 99443321 + MGP_CBAJ_P0044697 Ifnar2 protein_coding protein_coding MGP_CBAJ_T0044698.1 MGP_CBAJ_G0022738.1 mouse_genomes_project 16 99417550 99459562 + MGP_CBAJ_P0044698 Ifnar2 protein_coding protein_coding MGP_CBAJ_T0044699.1 MGP_CBAJ_G0022738.1 mouse_genomes_project 16 99437140 99441109 + MGP_CBAJ_P0044699 Ifnar2 protein_coding protein_coding MGP_CBAJ_T0042858.1 MGP_CBAJ_G0022240.1 mouse_genomes_project 16 11613332 11654145 + MGP_CBAJ_P0042858 Mpv17l protein_coding protein_coding MGP_CBAJ_T0042859.1 MGP_CBAJ_G0022240.1 mouse_genomes_project 16 11644614 11653477 + MGP_CBAJ_P0042859 Mpv17l protein_coding protein_coding MGP_CBAJ_T0042860.1 MGP_CBAJ_G0022240.1 mouse_genomes_project 16 11644679 11653336 + MGP_CBAJ_P0042860 Mpv17l protein_coding nonsense_mediated_decay MGP_CBAJ_T0042861.1 MGP_CBAJ_G0022240.1 mouse_genomes_project 16 11644686 11651633 + MGP_CBAJ_P0042861 Mpv17l protein_coding protein_coding MGP_CBAJ_T0042862.1 MGP_CBAJ_G0022240.1 mouse_genomes_project 16 11644698 11656630 + MGP_CBAJ_P0042862 Mpv17l protein_coding protein_coding MGP_CBAJ_T0042863.1 MGP_CBAJ_G0022240.1 mouse_genomes_project 16 11645078 11651599 + MGP_CBAJ_P0042863 Mpv17l protein_coding protein_coding MGP_CBAJ_T0044442.1 MGP_CBAJ_G0022639.1 mouse_genomes_project 16 66705691 66715356 + MGP_CBAJ_P0044442 Stx19 protein_coding protein_coding MGP_CBAJ_T0042578.1 MGP_CBAJ_G0022170.1 mouse_genomes_project 16 1268577 1326104 - MGP_CBAJ_P0042578 Coro7 protein_coding protein_coding MGP_CBAJ_T0042579.1 MGP_CBAJ_G0022170.1 mouse_genomes_project 16 1269821 1271316 - Coro7 protein_coding processed_transcript MGP_CBAJ_T0042580.1 MGP_CBAJ_G0022170.1 mouse_genomes_project 16 1271196 1272111 - Coro7 protein_coding retained_intron MGP_CBAJ_T0042581.1 MGP_CBAJ_G0022170.1 mouse_genomes_project 16 1271503 1326005 - MGP_CBAJ_P0042581 Coro7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042582.1 MGP_CBAJ_G0022170.1 mouse_genomes_project 16 1274322 1276304 - Coro7 protein_coding retained_intron MGP_CBAJ_T0042583.1 MGP_CBAJ_G0022170.1 mouse_genomes_project 16 1274690 1277480 - Coro7 protein_coding retained_intron MGP_CBAJ_T0042584.1 MGP_CBAJ_G0022170.1 mouse_genomes_project 16 1275721 1289198 - Coro7 protein_coding processed_transcript MGP_CBAJ_T0042585.1 MGP_CBAJ_G0022170.1 mouse_genomes_project 16 1275768 1277486 - Coro7 protein_coding retained_intron MGP_CBAJ_T0042586.1 MGP_CBAJ_G0022170.1 mouse_genomes_project 16 1277042 1307260 - Coro7 protein_coding retained_intron MGP_CBAJ_T0042590.1 MGP_CBAJ_G0022170.1 mouse_genomes_project 16 1295047 1326104 - MGP_CBAJ_P0042590 Coro7 protein_coding protein_coding MGP_CBAJ_T0042591.1 MGP_CBAJ_G0022170.1 mouse_genomes_project 16 1305639 1326040 - Coro7 protein_coding retained_intron MGP_CBAJ_T0042592.1 MGP_CBAJ_G0022170.1 mouse_genomes_project 16 1320936 1326069 - Coro7 protein_coding retained_intron MGP_CBAJ_T0044672.1 MGP_CBAJ_G0022732.1 mouse_genomes_project 16 98946278 99027277 - MGP_CBAJ_P0044672 Synj1 protein_coding protein_coding MGP_CBAJ_T0044673.1 MGP_CBAJ_G0022732.1 mouse_genomes_project 16 98946278 99027159 - MGP_CBAJ_P0044673 Synj1 protein_coding protein_coding MGP_CBAJ_T0044674.1 MGP_CBAJ_G0022732.1 mouse_genomes_project 16 98946293 98960533 - MGP_CBAJ_P0044674 Synj1 protein_coding protein_coding MGP_CBAJ_T0044675.1 MGP_CBAJ_G0022732.1 mouse_genomes_project 16 98948835 98956728 - Synj1 protein_coding processed_transcript MGP_CBAJ_T0044676.1 MGP_CBAJ_G0022732.1 mouse_genomes_project 16 98948981 98954947 - MGP_CBAJ_P0044676 Synj1 protein_coding protein_coding MGP_CBAJ_T0044677.1 MGP_CBAJ_G0022732.1 mouse_genomes_project 16 98954551 98960538 - MGP_CBAJ_P0044677 Synj1 protein_coding protein_coding MGP_CBAJ_T0044678.1 MGP_CBAJ_G0022732.1 mouse_genomes_project 16 98972942 99027030 - Synj1 protein_coding retained_intron MGP_CBAJ_T0044679.1 MGP_CBAJ_G0022732.1 mouse_genomes_project 16 98977914 99027029 - MGP_CBAJ_P0044679 Synj1 protein_coding protein_coding MGP_CBAJ_T0044680.1 MGP_CBAJ_G0022732.1 mouse_genomes_project 16 99025284 99027032 - Synj1 protein_coding retained_intron MGP_CBAJ_T0100195.1 MGP_CBAJ_G0038450.1 mouse_genomes_project 16 17628072 17628198 + Gm22158 snoRNA snoRNA MGP_CBAJ_T0043477.1 MGP_CBAJ_G0022380.1 mouse_genomes_project 16 22022580 22024123 + Eif4a2 protein_coding retained_intron MGP_CBAJ_T0043478.1 MGP_CBAJ_G0022380.1 mouse_genomes_project 16 22022580 22027435 + MGP_CBAJ_P0043478 Eif4a2 protein_coding protein_coding MGP_CBAJ_T0043479.1 MGP_CBAJ_G0022380.1 mouse_genomes_project 16 22022581 22023916 + Eif4a2 protein_coding retained_intron MGP_CBAJ_T0043480.1 MGP_CBAJ_G0022380.1 mouse_genomes_project 16 22022581 22024027 + Eif4a2 protein_coding retained_intron MGP_CBAJ_T0043481.1 MGP_CBAJ_G0022380.1 mouse_genomes_project 16 22022581 22028495 + MGP_CBAJ_P0043481 Eif4a2 protein_coding protein_coding MGP_CBAJ_T0043482.1 MGP_CBAJ_G0022380.1 mouse_genomes_project 16 22022589 22025983 + Eif4a2 protein_coding retained_intron MGP_CBAJ_T0043483.1 MGP_CBAJ_G0022380.1 mouse_genomes_project 16 22022593 22025532 + Eif4a2 protein_coding retained_intron MGP_CBAJ_T0043484.1 MGP_CBAJ_G0022380.1 mouse_genomes_project 16 22022595 22025141 + Eif4a2 protein_coding retained_intron MGP_CBAJ_T0043485.1 MGP_CBAJ_G0022380.1 mouse_genomes_project 16 22022599 22023996 + Eif4a2 protein_coding retained_intron MGP_CBAJ_T0043486.1 MGP_CBAJ_G0022380.1 mouse_genomes_project 16 22022601 22025070 + Eif4a2 protein_coding retained_intron MGP_CBAJ_T0043487.1 MGP_CBAJ_G0022380.1 mouse_genomes_project 16 22022739 22025473 + Eif4a2 protein_coding processed_transcript MGP_CBAJ_T0043488.1 MGP_CBAJ_G0022380.1 mouse_genomes_project 16 22023404 22024293 + Eif4a2 protein_coding retained_intron MGP_CBAJ_T0043489.1 MGP_CBAJ_G0022380.1 mouse_genomes_project 16 22024053 22025389 + Eif4a2 protein_coding retained_intron MGP_CBAJ_T0043490.1 MGP_CBAJ_G0022380.1 mouse_genomes_project 16 22024798 22027387 + Eif4a2 protein_coding retained_intron MGP_CBAJ_T0043491.1 MGP_CBAJ_G0022380.1 mouse_genomes_project 16 22024867 22025620 + Eif4a2 protein_coding retained_intron MGP_CBAJ_T0043492.1 MGP_CBAJ_G0022380.1 mouse_genomes_project 16 22025055 22026604 + Eif4a2 protein_coding retained_intron MGP_CBAJ_T0043493.1 MGP_CBAJ_G0022380.1 mouse_genomes_project 16 22025494 22026918 + Eif4a2 protein_coding retained_intron MGP_CBAJ_T0043494.1 MGP_CBAJ_G0022380.1 mouse_genomes_project 16 22025521 22027311 + Eif4a2 protein_coding retained_intron MGP_CBAJ_T0000933.1 MGP_CBAJ_G0000866.1 mouse_genomes_project 16 83505191 83510406 + TEC TEC MGP_CBAJ_T0043365.1 MGP_CBAJ_G0022353.1 mouse_genomes_project 16 19093063 19106064 + MGP_CBAJ_P0043365 Psmd2 protein_coding unknown_likely_coding MGP_CBAJ_T0043366.1 MGP_CBAJ_G0022353.1 mouse_genomes_project 16 19093071 19106233 + MGP_CBAJ_P0043366 Psmd2 protein_coding protein_coding MGP_CBAJ_T0043367.1 MGP_CBAJ_G0022353.1 mouse_genomes_project 16 19093123 19106233 + MGP_CBAJ_P0043367 Psmd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043368.1 MGP_CBAJ_G0022353.1 mouse_genomes_project 16 19093135 19094174 + Psmd2 protein_coding processed_transcript MGP_CBAJ_T0043369.1 MGP_CBAJ_G0022353.1 mouse_genomes_project 16 19101538 19102248 + Psmd2 protein_coding processed_transcript MGP_CBAJ_T0043370.1 MGP_CBAJ_G0022353.1 mouse_genomes_project 16 19101883 19102900 + Psmd2 protein_coding processed_transcript MGP_CBAJ_T0043371.1 MGP_CBAJ_G0022353.1 mouse_genomes_project 16 19101950 19104641 + Psmd2 protein_coding processed_transcript MGP_CBAJ_T0042512.1 MGP_CBAJ_G0022157.1 mouse_genomes_project 16 445196 458626 - 1700037C18Rik protein_coding processed_transcript MGP_CBAJ_T0042513.1 MGP_CBAJ_G0022157.1 mouse_genomes_project 16 445198 457730 - MGP_CBAJ_P0042513 1700037C18Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0042515.1 MGP_CBAJ_G0022157.1 mouse_genomes_project 16 454320 458662 - MGP_CBAJ_P0042515 1700037C18Rik protein_coding protein_coding MGP_CBAJ_T0042516.1 MGP_CBAJ_G0022157.1 mouse_genomes_project 16 455770 457675 - MGP_CBAJ_P0042516 1700037C18Rik protein_coding protein_coding MGP_CBAJ_T0042517.1 MGP_CBAJ_G0022157.1 mouse_genomes_project 16 456230 457624 - MGP_CBAJ_P0042517 1700037C18Rik protein_coding protein_coding MGP_CBAJ_T0042518.1 MGP_CBAJ_G0022157.1 mouse_genomes_project 16 456985 458596 - MGP_CBAJ_P0042518 1700037C18Rik protein_coding protein_coding MGP_CBAJ_T0000942.1 MGP_CBAJ_G0000875.1 mouse_genomes_project 16 99298654 99299454 + TEC TEC MGP_CBAJ_T0044693.1 MGP_CBAJ_G0022736.1 mouse_genomes_project 16 99264340 99267480 + MGP_CBAJ_P0044693 Olig2 protein_coding protein_coding MGP_CBAJ_T0012956.1 MGP_CBAJ_G0011068.1 mouse_genomes_project 16 8563203 8564215 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0042868.1 MGP_CBAJ_G0022244.1 mouse_genomes_project 16 11912296 11941882 + MGP_CBAJ_P0042868 Nde1 protein_coding protein_coding MGP_CBAJ_T0042869.1 MGP_CBAJ_G0022244.1 mouse_genomes_project 16 11912308 11941782 + MGP_CBAJ_P0042869 Nde1 protein_coding protein_coding MGP_CBAJ_T0042870.1 MGP_CBAJ_G0022244.1 mouse_genomes_project 16 11912319 11941872 + MGP_CBAJ_P0042870 Nde1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042871.1 MGP_CBAJ_G0022244.1 mouse_genomes_project 16 11912325 11919882 + Nde1 protein_coding retained_intron MGP_CBAJ_T0042872.1 MGP_CBAJ_G0022244.1 mouse_genomes_project 16 11912366 11941872 + MGP_CBAJ_P0042872 Nde1 protein_coding protein_coding MGP_CBAJ_T0042873.1 MGP_CBAJ_G0022244.1 mouse_genomes_project 16 11912370 11939395 + Nde1 protein_coding processed_transcript MGP_CBAJ_T0042874.1 MGP_CBAJ_G0022244.1 mouse_genomes_project 16 11924119 11937341 + Nde1 protein_coding retained_intron MGP_CBAJ_T0042875.1 MGP_CBAJ_G0022244.1 mouse_genomes_project 16 11932520 11939475 + MGP_CBAJ_P0042875 Nde1 protein_coding protein_coding MGP_CBAJ_T0042627.1 MGP_CBAJ_G0022183.1 mouse_genomes_project 16 1716287 1717306 + MGP_CBAJ_P0042627 Smim22 protein_coding protein_coding MGP_CBAJ_T0042628.1 MGP_CBAJ_G0022183.1 mouse_genomes_project 16 1716315 1717042 + Smim22 protein_coding retained_intron MGP_CBAJ_T0042629.1 MGP_CBAJ_G0022183.1 mouse_genomes_project 16 1716336 1717309 + MGP_CBAJ_P0042629 Smim22 protein_coding protein_coding MGP_CBAJ_T0042630.1 MGP_CBAJ_G0022183.1 mouse_genomes_project 16 1716351 1717309 + Smim22 protein_coding processed_transcript MGP_CBAJ_T0042631.1 MGP_CBAJ_G0022183.1 mouse_genomes_project 16 1716351 1717309 + MGP_CBAJ_P0042631 Smim22 protein_coding protein_coding MGP_CBAJ_T0042632.1 MGP_CBAJ_G0022183.1 mouse_genomes_project 16 1716351 1717306 + MGP_CBAJ_P0042632 Smim22 protein_coding protein_coding MGP_CBAJ_T0042633.1 MGP_CBAJ_G0022183.1 mouse_genomes_project 16 1716358 1717309 + Smim22 protein_coding processed_transcript MGP_CBAJ_T0042634.1 MGP_CBAJ_G0022183.1 mouse_genomes_project 16 1716767 1717309 + Smim22 protein_coding retained_intron MGP_CBAJ_T0006777.1 MGP_CBAJ_G0005580.1 mouse_genomes_project 16 98486762 98487485 + 1110008E08Rik lincRNA lincRNA MGP_CBAJ_T0006778.1 MGP_CBAJ_G0005580.1 mouse_genomes_project 16 98486762 98487483 + 1110008E08Rik lincRNA lincRNA MGP_CBAJ_T0043883.1 MGP_CBAJ_G0022482.1 mouse_genomes_project 16 36810686 36820890 + MGP_CBAJ_P0043883 Gm5483 protein_coding protein_coding MGP_CBAJ_T0009995.1 MGP_CBAJ_G0008133.1 mouse_genomes_project 16 11908648 11908715 + Mir484 miRNA miRNA MGP_CBAJ_T0100238.1 MGP_CBAJ_G0038493.1 mouse_genomes_project 16 95024643 95024779 - Gm24891 snoRNA snoRNA MGP_CBAJ_T0098980.1 MGP_CBAJ_G0037235.1 mouse_genomes_project 16 100057263 100057356 - Gm25245 snRNA snRNA MGP_CBAJ_T0044721.1 MGP_CBAJ_G0022745.1 mouse_genomes_project 16 99723797 99757123 - MGP_CBAJ_P0044721 Gart protein_coding protein_coding MGP_CBAJ_T0044722.1 MGP_CBAJ_G0022745.1 mouse_genomes_project 16 99724004 99753564 - MGP_CBAJ_P0044722 Gart protein_coding nonsense_mediated_decay MGP_CBAJ_T0044723.1 MGP_CBAJ_G0022745.1 mouse_genomes_project 16 99740861 99757106 - MGP_CBAJ_P0044723 Gart protein_coding protein_coding MGP_CBAJ_T0043811.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34265232 34393640 - MGP_CBAJ_P0043811 protein_coding protein_coding MGP_CBAJ_T0043812.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34266137 34269709 - protein_coding retained_intron MGP_CBAJ_T0043813.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34266469 34796840 - MGP_CBAJ_P0043813 protein_coding protein_coding MGP_CBAJ_T0043814.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34266490 34393533 - MGP_CBAJ_P0043814 protein_coding unknown_likely_coding MGP_CBAJ_T0043815.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34306215 34471027 - MGP_CBAJ_P0043815 protein_coding protein_coding MGP_CBAJ_T0043816.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34306220 34394743 - MGP_CBAJ_P0043816 protein_coding protein_coding MGP_CBAJ_T0043817.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34306220 34727125 - MGP_CBAJ_P0043817 protein_coding protein_coding MGP_CBAJ_T0043818.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34306229 34393681 - MGP_CBAJ_P0043818 protein_coding protein_coding MGP_CBAJ_T0043819.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34343532 34928045 - MGP_CBAJ_P0043819 protein_coding protein_coding MGP_CBAJ_T0043820.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34456812 34858991 - MGP_CBAJ_P0043820 protein_coding protein_coding MGP_CBAJ_T0043821.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34456813 34577906 - MGP_CBAJ_P0043821 protein_coding protein_coding MGP_CBAJ_T0043822.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34456823 34859029 - MGP_CBAJ_P0043822 protein_coding protein_coding MGP_CBAJ_T0043823.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34456883 34577671 - MGP_CBAJ_P0043823 protein_coding protein_coding MGP_CBAJ_T0043824.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34461171 34577899 - MGP_CBAJ_P0043824 protein_coding protein_coding MGP_CBAJ_T0043825.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34461238 34858887 - MGP_CBAJ_P0043825 protein_coding protein_coding MGP_CBAJ_T0043826.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34485716 34577545 - MGP_CBAJ_P0043826 protein_coding protein_coding MGP_CBAJ_T0043827.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34530392 34577616 - protein_coding retained_intron MGP_CBAJ_T0043828.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34558063 34567022 - protein_coding processed_transcript MGP_CBAJ_T0043829.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34681910 34690130 - protein_coding processed_transcript MGP_CBAJ_T0043830.1 MGP_CBAJ_G0022463.1 mouse_genomes_project 16 34857717 34859058 - protein_coding processed_transcript MGP_CBAJ_T0044853.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930373 103034835 + MGP_CBAJ_P0044853 Ttc3 protein_coding protein_coding MGP_CBAJ_T0044854.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930494 103008181 + MGP_CBAJ_P0044854 Ttc3 protein_coding protein_coding MGP_CBAJ_T0044855.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930498 102969283 + Ttc3 protein_coding retained_intron MGP_CBAJ_T0044856.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930498 102999708 + MGP_CBAJ_P0044856 Ttc3 protein_coding protein_coding MGP_CBAJ_T0044857.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930501 103008186 + MGP_CBAJ_P0044857 Ttc3 protein_coding protein_coding MGP_CBAJ_T0044858.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930504 102984137 + MGP_CBAJ_P0044858 Ttc3 protein_coding protein_coding MGP_CBAJ_T0044859.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930505 102957963 + MGP_CBAJ_P0044859 Ttc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044860.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930506 102981805 + Ttc3 protein_coding processed_transcript MGP_CBAJ_T0044861.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930506 102987740 + MGP_CBAJ_P0044861 Ttc3 protein_coding protein_coding MGP_CBAJ_T0044862.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930506 102984065 + MGP_CBAJ_P0044862 Ttc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044863.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930512 103008193 + MGP_CBAJ_P0044863 Ttc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044864.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930522 102975165 + Ttc3 protein_coding processed_transcript MGP_CBAJ_T0044865.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930522 102952044 + MGP_CBAJ_P0044865 Ttc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044866.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930522 102946934 + MGP_CBAJ_P0044866 Ttc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044867.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930522 103008183 + MGP_CBAJ_P0044867 Ttc3 protein_coding protein_coding MGP_CBAJ_T0044868.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930535 102981403 + MGP_CBAJ_P0044868 Ttc3 protein_coding protein_coding MGP_CBAJ_T0044869.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930536 103008193 + MGP_CBAJ_P0044869 Ttc3 protein_coding protein_coding MGP_CBAJ_T0044870.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930536 103008193 + MGP_CBAJ_P0044870 Ttc3 protein_coding protein_coding MGP_CBAJ_T0044871.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930551 102993329 + MGP_CBAJ_P0044871 Ttc3 protein_coding protein_coding MGP_CBAJ_T0044872.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930552 102976310 + MGP_CBAJ_P0044872 Ttc3 protein_coding protein_coding MGP_CBAJ_T0044873.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930552 102968812 + MGP_CBAJ_P0044873 Ttc3 protein_coding protein_coding MGP_CBAJ_T0044874.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930553 102977578 + Ttc3 protein_coding processed_transcript MGP_CBAJ_T0044875.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930553 102958207 + MGP_CBAJ_P0044875 Ttc3 protein_coding protein_coding MGP_CBAJ_T0044876.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102930578 102985724 + MGP_CBAJ_P0044876 Ttc3 protein_coding protein_coding MGP_CBAJ_T0044877.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 102990590 102998516 + MGP_CBAJ_P0044877 Ttc3 protein_coding protein_coding MGP_CBAJ_T0044878.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 103005611 103014275 + Ttc3 protein_coding retained_intron MGP_CBAJ_T0044879.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 103016667 103025631 + MGP_CBAJ_P0044879 Ttc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044880.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 103022949 103033607 + Ttc3 protein_coding retained_intron MGP_CBAJ_T0044881.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 103030703 103034498 + Ttc3 protein_coding retained_intron MGP_CBAJ_T0044882.1 MGP_CBAJ_G0022771.1 mouse_genomes_project 16 103032064 103033830 + Ttc3 protein_coding retained_intron MGP_CBAJ_T0009989.1 MGP_CBAJ_G0008127.1 mouse_genomes_project 16 8632728 8632806 - Mir1945 miRNA miRNA MGP_CBAJ_T0044987.1 MGP_CBAJ_G0022791.1 mouse_genomes_project 16 106433911 106439140 - Fam3b protein_coding processed_transcript MGP_CBAJ_T0044988.1 MGP_CBAJ_G0022791.1 mouse_genomes_project 16 106433945 106467451 - MGP_CBAJ_P0044988 Fam3b protein_coding protein_coding MGP_CBAJ_T0043619.1 MGP_CBAJ_G0022419.1 mouse_genomes_project 16 30917628 31038660 - MGP_CBAJ_P0043619 Acap2 protein_coding protein_coding MGP_CBAJ_T0043620.1 MGP_CBAJ_G0022419.1 mouse_genomes_project 16 30926954 31038413 - MGP_CBAJ_P0043620 Acap2 protein_coding unknown_likely_coding MGP_CBAJ_T0000921.1 MGP_CBAJ_G0000855.1 mouse_genomes_project 16 41343834 41343877 + TEC TEC MGP_CBAJ_T0043964.1 MGP_CBAJ_G0022501.1 mouse_genomes_project 16 38416104 38450153 - MGP_CBAJ_P0043964 Gtf2e1 protein_coding protein_coding MGP_CBAJ_T0043965.1 MGP_CBAJ_G0022501.1 mouse_genomes_project 16 38442876 38450140 - Gtf2e1 protein_coding retained_intron MGP_CBAJ_T0098982.1 MGP_CBAJ_G0037237.1 mouse_genomes_project 16 102994536 102994696 + Gm23692 snRNA snRNA MGP_CBAJ_T0044413.1 MGP_CBAJ_G0022630.1 mouse_genomes_project 16 62670550 62671555 - MGP_CBAJ_P0044413 Olfr206 protein_coding protein_coding MGP_CBAJ_T0098943.1 MGP_CBAJ_G0037198.1 mouse_genomes_project 16 19203149 19203314 + Gm22741 snRNA snRNA MGP_CBAJ_T0042723.1 MGP_CBAJ_G0022209.1 mouse_genomes_project 16 7684435 7711206 - MGP_CBAJ_P0042723 Tvp23a protein_coding protein_coding MGP_CBAJ_T0042725.1 MGP_CBAJ_G0022209.1 mouse_genomes_project 16 7687122 7710988 - MGP_CBAJ_P0042725 Tvp23a protein_coding nonsense_mediated_decay MGP_CBAJ_T0042726.1 MGP_CBAJ_G0022209.1 mouse_genomes_project 16 7688089 7711171 - Tvp23a protein_coding processed_transcript MGP_CBAJ_T0042727.1 MGP_CBAJ_G0022209.1 mouse_genomes_project 16 7689731 7693041 - Tvp23a protein_coding processed_transcript MGP_CBAJ_T0042728.1 MGP_CBAJ_G0022209.1 mouse_genomes_project 16 7690907 7693117 - Tvp23a protein_coding processed_transcript MGP_CBAJ_T0097977.1 MGP_CBAJ_G0036250.1 mouse_genomes_project 16 65074525 65074643 - n-R5s37 rRNA rRNA MGP_CBAJ_T0013019.1 MGP_CBAJ_G0011131.1 mouse_genomes_project 16 80648980 80649988 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0044342.1 MGP_CBAJ_G0022596.1 mouse_genomes_project 16 60073044 60103499 - MGP_CBAJ_P0044342 Tmem45a2 protein_coding protein_coding MGP_CBAJ_T0044405.1 MGP_CBAJ_G0022622.1 mouse_genomes_project 16 62390906 62391901 + MGP_CBAJ_P0044405 Olfr195 protein_coding protein_coding MGP_CBAJ_T0044430.1 MGP_CBAJ_G0022636.1 mouse_genomes_project 16 63025106 64133768 - MGP_CBAJ_P0044430 Epha6 protein_coding protein_coding MGP_CBAJ_T0044431.1 MGP_CBAJ_G0022636.1 mouse_genomes_project 16 63043699 63477970 - MGP_CBAJ_P0044431 Epha6 protein_coding protein_coding MGP_CBAJ_T0044432.1 MGP_CBAJ_G0022636.1 mouse_genomes_project 16 63936944 64134051 - Epha6 protein_coding retained_intron MGP_CBAJ_T0044433.1 MGP_CBAJ_G0022636.1 mouse_genomes_project 16 63989942 64133739 - Epha6 protein_coding processed_transcript MGP_CBAJ_T0006731.1 MGP_CBAJ_G0005546.1 mouse_genomes_project 16 11120638 11126941 - 2310015D24Rik lincRNA lincRNA MGP_CBAJ_T0006732.1 MGP_CBAJ_G0005546.1 mouse_genomes_project 16 11125700 11127629 - 2310015D24Rik lincRNA lincRNA MGP_CBAJ_T0003602.1 MGP_CBAJ_G0003259.1 mouse_genomes_project 16 37079718 37131234 + antisense antisense MGP_CBAJ_T0043768.1 MGP_CBAJ_G0022452.1 mouse_genomes_project 16 33103570 33156285 - MGP_CBAJ_P0043768 Iqcg protein_coding protein_coding MGP_CBAJ_T0043769.1 MGP_CBAJ_G0022452.1 mouse_genomes_project 16 33105135 33113801 - Iqcg protein_coding processed_transcript MGP_CBAJ_T0043770.1 MGP_CBAJ_G0022452.1 mouse_genomes_project 16 33137527 33156313 - MGP_CBAJ_P0043770 Iqcg protein_coding protein_coding MGP_CBAJ_T0043771.1 MGP_CBAJ_G0022452.1 mouse_genomes_project 16 33149310 33156280 - Iqcg protein_coding retained_intron MGP_CBAJ_T0006752.1 MGP_CBAJ_G0005564.1 mouse_genomes_project 16 39479959 39481470 + D930030I03Rik lincRNA lincRNA MGP_CBAJ_T0044262.1 MGP_CBAJ_G0022578.1 mouse_genomes_project 16 52334736 52595042 - MGP_CBAJ_P0044262 Bbx protein_coding protein_coding MGP_CBAJ_T0044263.1 MGP_CBAJ_G0022578.1 mouse_genomes_project 16 52338673 52594992 - MGP_CBAJ_P0044263 Bbx protein_coding protein_coding MGP_CBAJ_T0044264.1 MGP_CBAJ_G0022578.1 mouse_genomes_project 16 52339507 52595041 - MGP_CBAJ_P0044264 Bbx protein_coding protein_coding MGP_CBAJ_T0044265.1 MGP_CBAJ_G0022578.1 mouse_genomes_project 16 52340030 52489196 - MGP_CBAJ_P0044265 Bbx protein_coding protein_coding MGP_CBAJ_T0044266.1 MGP_CBAJ_G0022578.1 mouse_genomes_project 16 52353362 52595026 - MGP_CBAJ_P0044266 Bbx protein_coding protein_coding MGP_CBAJ_T0044267.1 MGP_CBAJ_G0022578.1 mouse_genomes_project 16 52361367 52595041 - MGP_CBAJ_P0044267 Bbx protein_coding protein_coding MGP_CBAJ_T0044268.1 MGP_CBAJ_G0022578.1 mouse_genomes_project 16 52371380 52592793 - Bbx protein_coding processed_transcript MGP_CBAJ_T0044269.1 MGP_CBAJ_G0022578.1 mouse_genomes_project 16 52588822 52594961 - Bbx protein_coding retained_intron MGP_CBAJ_T0044270.1 MGP_CBAJ_G0022578.1 mouse_genomes_project 16 52590247 52594999 - Bbx protein_coding processed_transcript MGP_CBAJ_T0043515.1 MGP_CBAJ_G0022390.1 mouse_genomes_project 16 23022798 23051865 - MGP_CBAJ_P0043515 Bcl6 protein_coding protein_coding MGP_CBAJ_T0043516.1 MGP_CBAJ_G0022390.1 mouse_genomes_project 16 23028240 23032935 - Bcl6 protein_coding retained_intron MGP_CBAJ_T0003609.1 MGP_CBAJ_G0003266.1 mouse_genomes_project 16 47673144 47676103 + Gm15640 antisense antisense MGP_CBAJ_T0003625.1 MGP_CBAJ_G0003278.1 mouse_genomes_project 16 104941679 104943785 - Gm15317 antisense antisense MGP_CBAJ_T0044830.1 MGP_CBAJ_G0022765.1 mouse_genomes_project 16 102359687 102382993 + MGP_CBAJ_P0044830 Chaf1b protein_coding protein_coding MGP_CBAJ_T0044831.1 MGP_CBAJ_G0022765.1 mouse_genomes_project 16 102359710 102382955 + MGP_CBAJ_P0044831 Chaf1b protein_coding protein_coding MGP_CBAJ_T0044832.1 MGP_CBAJ_G0022765.1 mouse_genomes_project 16 102359717 102370073 + Chaf1b protein_coding retained_intron MGP_CBAJ_T0044833.1 MGP_CBAJ_G0022765.1 mouse_genomes_project 16 102359802 102361258 + MGP_CBAJ_P0044833 Chaf1b protein_coding protein_coding MGP_CBAJ_T0044834.1 MGP_CBAJ_G0022765.1 mouse_genomes_project 16 102359988 102362939 + MGP_CBAJ_P0044834 Chaf1b protein_coding protein_coding MGP_CBAJ_T0044835.1 MGP_CBAJ_G0022765.1 mouse_genomes_project 16 102362496 102368574 + Chaf1b protein_coding processed_transcript MGP_CBAJ_T0044836.1 MGP_CBAJ_G0022765.1 mouse_genomes_project 16 102368525 102377007 + Chaf1b protein_coding retained_intron MGP_CBAJ_T0044837.1 MGP_CBAJ_G0022765.1 mouse_genomes_project 16 102381570 102382988 + Chaf1b protein_coding retained_intron MGP_CBAJ_T0043271.1 MGP_CBAJ_G0022334.1 mouse_genomes_project 16 17898451 17916428 - MGP_CBAJ_P0043271 protein_coding protein_coding MGP_CBAJ_T0044594.1 MGP_CBAJ_G0022693.1 mouse_genomes_project 16 96421131 96422076 + MGP_CBAJ_P0044594 2310034C09Rik protein_coding protein_coding MGP_CBAJ_T0043230.1 MGP_CBAJ_G0022317.1 mouse_genomes_project 16 16872886 16874971 - MGP_CBAJ_P0043230 Gp1bb protein_coding protein_coding MGP_CBAJ_T0043231.1 MGP_CBAJ_G0022317.1 mouse_genomes_project 16 16873289 16873934 - MGP_CBAJ_P0043231 Gp1bb protein_coding protein_coding MGP_CBAJ_T0042705.1 MGP_CBAJ_G0022203.1 mouse_genomes_project 16 6718591 7176104 - MGP_CBAJ_P0042705 Grin2a protein_coding protein_coding MGP_CBAJ_T0042706.1 MGP_CBAJ_G0022203.1 mouse_genomes_project 16 6929464 6965739 - Grin2a protein_coding processed_transcript MGP_CBAJ_T0042707.1 MGP_CBAJ_G0022203.1 mouse_genomes_project 16 7172833 7176741 - Grin2a protein_coding retained_intron MGP_CBAJ_T0042708.1 MGP_CBAJ_G0022203.1 mouse_genomes_project 16 7172833 7175451 - Grin2a protein_coding retained_intron MGP_CBAJ_T0006744.1 MGP_CBAJ_G0005556.1 mouse_genomes_project 16 29458257 29486715 + Gm26834 lincRNA lincRNA MGP_CBAJ_T0043736.1 MGP_CBAJ_G0022448.1 mouse_genomes_project 16 32848875 32859782 - MGP_CBAJ_P0043736 Gm933 protein_coding protein_coding MGP_CBAJ_T0012988.1 MGP_CBAJ_G0011100.1 mouse_genomes_project 16 31897610 31897893 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017271.1 MGP_CBAJ_G0015071.1 mouse_genomes_project 16 99801575 99840071 + Gm10785 processed_transcript processed_transcript MGP_CBAJ_T0000922.1 MGP_CBAJ_G0000856.1 mouse_genomes_project 16 41545831 41546270 + TEC TEC MGP_CBAJ_T0044621.1 MGP_CBAJ_G0022716.1 mouse_genomes_project 16 96885905 96886370 + MGP_CBAJ_P0044621 1110057P08Rik protein_coding protein_coding MGP_CBAJ_T0042746.1 MGP_CBAJ_G0022214.1 mouse_genomes_project 16 8114498 8115218 - MGP_CBAJ_P0042746 Tnp2 protein_coding protein_coding MGP_CBAJ_T0042842.1 MGP_CBAJ_G0022239.1 mouse_genomes_project 16 11533068 11613299 - MGP_CBAJ_P0042842 Pdxdc1 protein_coding protein_coding MGP_CBAJ_T0042843.1 MGP_CBAJ_G0022239.1 mouse_genomes_project 16 11533498 11541232 - Pdxdc1 protein_coding processed_transcript MGP_CBAJ_T0042845.1 MGP_CBAJ_G0022239.1 mouse_genomes_project 16 11534072 11546356 - Pdxdc1 protein_coding processed_transcript MGP_CBAJ_T0042846.1 MGP_CBAJ_G0022239.1 mouse_genomes_project 16 11534077 11613193 - MGP_CBAJ_P0042846 Pdxdc1 protein_coding protein_coding MGP_CBAJ_T0042847.1 MGP_CBAJ_G0022239.1 mouse_genomes_project 16 11534193 11537980 - Pdxdc1 protein_coding processed_transcript MGP_CBAJ_T0042848.1 MGP_CBAJ_G0022239.1 mouse_genomes_project 16 11535509 11613154 - Pdxdc1 protein_coding retained_intron MGP_CBAJ_T0042849.1 MGP_CBAJ_G0022239.1 mouse_genomes_project 16 11536705 11540237 - Pdxdc1 protein_coding processed_transcript MGP_CBAJ_T0042850.1 MGP_CBAJ_G0022239.1 mouse_genomes_project 16 11537854 11541237 - Pdxdc1 protein_coding processed_transcript MGP_CBAJ_T0042851.1 MGP_CBAJ_G0022239.1 mouse_genomes_project 16 11538533 11539262 - Pdxdc1 protein_coding retained_intron MGP_CBAJ_T0042852.1 MGP_CBAJ_G0022239.1 mouse_genomes_project 16 11550694 11613227 - MGP_CBAJ_P0042852 Pdxdc1 protein_coding protein_coding MGP_CBAJ_T0042853.1 MGP_CBAJ_G0022239.1 mouse_genomes_project 16 11552260 11613303 - MGP_CBAJ_P0042853 Pdxdc1 protein_coding protein_coding MGP_CBAJ_T0042854.1 MGP_CBAJ_G0022239.1 mouse_genomes_project 16 11562555 11584015 - Pdxdc1 protein_coding retained_intron MGP_CBAJ_T0042855.1 MGP_CBAJ_G0022239.1 mouse_genomes_project 16 11583845 11613157 - Pdxdc1 protein_coding processed_transcript MGP_CBAJ_T0042856.1 MGP_CBAJ_G0022239.1 mouse_genomes_project 16 11591867 11613147 - Pdxdc1 protein_coding processed_transcript MGP_CBAJ_T0042857.1 MGP_CBAJ_G0022239.1 mouse_genomes_project 16 11597418 11613152 - Pdxdc1 protein_coding retained_intron MGP_CBAJ_T0043250.1 MGP_CBAJ_G0022323.1 mouse_genomes_project 16 17087465 17219299 + MGP_CBAJ_P0043250 Gm28539 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042748.1 MGP_CBAJ_G0022216.1 mouse_genomes_project 16 8117946 8118672 - MGP_CBAJ_P0042748 Prm2 protein_coding protein_coding MGP_CBAJ_T0042749.1 MGP_CBAJ_G0022216.1 mouse_genomes_project 16 8118103 8122794 - MGP_CBAJ_P0042749 Prm2 protein_coding protein_coding MGP_CBAJ_T0017272.1 MGP_CBAJ_G0015072.1 mouse_genomes_project 16 100067405 100108925 + D430001F17Rik processed_transcript processed_transcript MGP_CBAJ_T0098938.1 MGP_CBAJ_G0037193.1 mouse_genomes_project 16 14994454 14994549 - Gm22558 snRNA snRNA MGP_CBAJ_T0003592.1 MGP_CBAJ_G0003253.1 mouse_genomes_project 16 32856791 32860511 + antisense antisense MGP_CBAJ_T0098958.1 MGP_CBAJ_G0037213.1 mouse_genomes_project 16 37192067 37192171 + Gm22263 snRNA snRNA MGP_CBAJ_T0043537.1 MGP_CBAJ_G0022397.1 mouse_genomes_project 16 25832931 25855643 - MGP_CBAJ_P0043537 Tmem207 protein_coding protein_coding MGP_CBAJ_T0006756.1 MGP_CBAJ_G0005568.1 mouse_genomes_project 16 51230528 51283608 - 1700026J12Rik lincRNA lincRNA MGP_CBAJ_T0006757.1 MGP_CBAJ_G0005568.1 mouse_genomes_project 16 51230555 51283608 - 1700026J12Rik lincRNA lincRNA MGP_CBAJ_T0043286.1 MGP_CBAJ_G0022340.1 mouse_genomes_project 16 18507795 18604337 + MGP_CBAJ_P0043286 Yeats2 protein_coding protein_coding MGP_CBAJ_T0043287.1 MGP_CBAJ_G0022340.1 mouse_genomes_project 16 18507795 18604337 + MGP_CBAJ_P0043287 Yeats2 protein_coding protein_coding MGP_CBAJ_T0043288.1 MGP_CBAJ_G0022340.1 mouse_genomes_project 16 18507878 18574863 + MGP_CBAJ_P0043288 Yeats2 protein_coding unknown_likely_coding MGP_CBAJ_T0044544.1 MGP_CBAJ_G0022673.1 mouse_genomes_project 16 92613866 92760814 - MGP_CBAJ_P0044544 Cyyr1 protein_coding protein_coding MGP_CBAJ_T0044545.1 MGP_CBAJ_G0022673.1 mouse_genomes_project 16 92648808 92760814 - MGP_CBAJ_P0044545 Cyyr1 protein_coding protein_coding MGP_CBAJ_T0044819.1 MGP_CBAJ_G0022761.1 mouse_genomes_project 16 102040335 102043005 + MGP_CBAJ_P0044819 Cbr1 protein_coding protein_coding MGP_CBAJ_T0044845.1 MGP_CBAJ_G0022769.1 mouse_genomes_project 16 102878455 102893654 + MGP_CBAJ_P0044845 Ripply3 protein_coding protein_coding MGP_CBAJ_T0013020.1 MGP_CBAJ_G0011132.1 mouse_genomes_project 16 81543831 81544261 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0044291.1 MGP_CBAJ_G0022586.1 mouse_genomes_project 16 58868517 58878765 + MGP_CBAJ_P0044291 Rpl24 protein_coding protein_coding MGP_CBAJ_T0044292.1 MGP_CBAJ_G0022586.1 mouse_genomes_project 16 58868663 58878765 + Rpl24 protein_coding processed_transcript MGP_CBAJ_T0044293.1 MGP_CBAJ_G0022586.1 mouse_genomes_project 16 58869619 58874509 + Rpl24 protein_coding retained_intron MGP_CBAJ_T0044294.1 MGP_CBAJ_G0022586.1 mouse_genomes_project 16 58874720 58878765 + Rpl24 protein_coding retained_intron MGP_CBAJ_T0043438.1 MGP_CBAJ_G0022368.1 mouse_genomes_project 16 20722932 20762732 + MGP_CBAJ_P0043438 Senp2 protein_coding protein_coding MGP_CBAJ_T0044238.1 MGP_CBAJ_G0022572.1 mouse_genomes_project 16 50861013 50862897 + MGP_CBAJ_P0044238 Retnlg protein_coding protein_coding MGP_CBAJ_T0003622.1 MGP_CBAJ_G0003275.1 mouse_genomes_project 16 100851208 100858417 + Gm26626 antisense antisense MGP_CBAJ_T0043324.1 MGP_CBAJ_G0022347.1 mouse_genomes_project 16 18962578 18971618 + MGP_CBAJ_P0043324 protein_coding unknown_likely_coding MGP_CBAJ_T0043325.1 MGP_CBAJ_G0022347.1 mouse_genomes_project 16 18962649 18965091 + protein_coding retained_intron MGP_CBAJ_T0043326.1 MGP_CBAJ_G0022347.1 mouse_genomes_project 16 18967228 18972051 + protein_coding processed_transcript MGP_CBAJ_T0043327.1 MGP_CBAJ_G0022347.1 mouse_genomes_project 16 18967874 18971749 + protein_coding retained_intron MGP_CBAJ_T0043328.1 MGP_CBAJ_G0022347.1 mouse_genomes_project 16 18968004 18971624 + protein_coding retained_intron MGP_CBAJ_T0043329.1 MGP_CBAJ_G0022347.1 mouse_genomes_project 16 18968224 18971356 + protein_coding retained_intron MGP_CBAJ_T0043330.1 MGP_CBAJ_G0022347.1 mouse_genomes_project 16 18971853 18972610 + protein_coding retained_intron MGP_CBAJ_T0042682.1 MGP_CBAJ_G0022198.1 mouse_genomes_project 16 5661946 5681810 + MGP_CBAJ_P0042682 Pmm2 protein_coding protein_coding MGP_CBAJ_T0042683.1 MGP_CBAJ_G0022198.1 mouse_genomes_project 16 5661995 5673394 + Pmm2 protein_coding retained_intron MGP_CBAJ_T0042684.1 MGP_CBAJ_G0022198.1 mouse_genomes_project 16 5662010 5669289 + Pmm2 protein_coding retained_intron MGP_CBAJ_T0042685.1 MGP_CBAJ_G0022198.1 mouse_genomes_project 16 5662314 5675706 + Pmm2 protein_coding processed_transcript MGP_CBAJ_T0042686.1 MGP_CBAJ_G0022198.1 mouse_genomes_project 16 5670243 5672989 + Pmm2 protein_coding retained_intron MGP_CBAJ_T0042687.1 MGP_CBAJ_G0022198.1 mouse_genomes_project 16 5672870 5681021 + Pmm2 protein_coding retained_intron MGP_CBAJ_T0043663.1 MGP_CBAJ_G0022430.1 mouse_genomes_project 16 32018154 32034742 - MGP_CBAJ_P0043663 Pigx protein_coding protein_coding MGP_CBAJ_T0043664.1 MGP_CBAJ_G0022430.1 mouse_genomes_project 16 32018156 32021897 - Pigx protein_coding processed_transcript MGP_CBAJ_T0043665.1 MGP_CBAJ_G0022430.1 mouse_genomes_project 16 32018160 32034719 - Pigx protein_coding processed_transcript MGP_CBAJ_T0043666.1 MGP_CBAJ_G0022430.1 mouse_genomes_project 16 32018160 32034753 - MGP_CBAJ_P0043666 Pigx protein_coding protein_coding MGP_CBAJ_T0043667.1 MGP_CBAJ_G0022430.1 mouse_genomes_project 16 32018174 32034743 - MGP_CBAJ_P0043667 Pigx protein_coding protein_coding MGP_CBAJ_T0043668.1 MGP_CBAJ_G0022430.1 mouse_genomes_project 16 32018197 32034722 - MGP_CBAJ_P0043668 Pigx protein_coding nonsense_mediated_decay MGP_CBAJ_T0043669.1 MGP_CBAJ_G0022430.1 mouse_genomes_project 16 32019032 32034708 - MGP_CBAJ_P0043669 Pigx protein_coding nonsense_mediated_decay MGP_CBAJ_T0043670.1 MGP_CBAJ_G0022430.1 mouse_genomes_project 16 32021042 32034711 - MGP_CBAJ_P0043670 Pigx protein_coding nonsense_mediated_decay MGP_CBAJ_T0043671.1 MGP_CBAJ_G0022430.1 mouse_genomes_project 16 32021248 32034715 - MGP_CBAJ_P0043671 Pigx protein_coding nonsense_mediated_decay MGP_CBAJ_T0043672.1 MGP_CBAJ_G0022430.1 mouse_genomes_project 16 32032448 32034726 - MGP_CBAJ_P0043672 Pigx protein_coding nonsense_mediated_decay MGP_CBAJ_T0043932.1 MGP_CBAJ_G0022496.1 mouse_genomes_project 16 37718862 37731357 + Golgb1 protein_coding processed_transcript MGP_CBAJ_T0043933.1 MGP_CBAJ_G0022496.1 mouse_genomes_project 16 37718863 37733158 + MGP_CBAJ_P0043933 Golgb1 protein_coding protein_coding MGP_CBAJ_T0043934.1 MGP_CBAJ_G0022496.1 mouse_genomes_project 16 37718863 37719392 + MGP_CBAJ_P0043934 Golgb1 protein_coding protein_coding MGP_CBAJ_T0043935.1 MGP_CBAJ_G0022496.1 mouse_genomes_project 16 37718890 37776848 + MGP_CBAJ_P0043935 Golgb1 protein_coding protein_coding MGP_CBAJ_T0043936.1 MGP_CBAJ_G0022496.1 mouse_genomes_project 16 37718924 37733160 + MGP_CBAJ_P0043936 Golgb1 protein_coding protein_coding MGP_CBAJ_T0043937.1 MGP_CBAJ_G0022496.1 mouse_genomes_project 16 37718938 37776850 + MGP_CBAJ_P0043937 Golgb1 protein_coding unknown_likely_coding MGP_CBAJ_T0043938.1 MGP_CBAJ_G0022496.1 mouse_genomes_project 16 37768219 37772134 + Golgb1 protein_coding retained_intron MGP_CBAJ_T0043939.1 MGP_CBAJ_G0022496.1 mouse_genomes_project 16 37775162 37775836 + Golgb1 protein_coding retained_intron MGP_CBAJ_T0101676.1 MGP_CBAJ_G0039707.1 mouse_genomes_project 16 62196982 62198064 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0043372.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19116992 19130906 + MGP_CBAJ_P0043372 Eif4g1 protein_coding protein_coding MGP_CBAJ_T0043373.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19116994 19130436 + MGP_CBAJ_P0043373 Eif4g1 protein_coding protein_coding MGP_CBAJ_T0043374.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19124233 19144427 + MGP_CBAJ_P0043374 Eif4g1 protein_coding protein_coding MGP_CBAJ_T0043375.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19124256 19144426 + MGP_CBAJ_P0043375 Eif4g1 protein_coding protein_coding MGP_CBAJ_T0043376.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19124259 19135376 + MGP_CBAJ_P0043376 Eif4g1 protein_coding protein_coding MGP_CBAJ_T0043377.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19124259 19144424 + MGP_CBAJ_P0043377 Eif4g1 protein_coding protein_coding MGP_CBAJ_T0043378.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19124265 19144426 + MGP_CBAJ_P0043378 Eif4g1 protein_coding protein_coding MGP_CBAJ_T0043379.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19124280 19135382 + MGP_CBAJ_P0043379 Eif4g1 protein_coding protein_coding MGP_CBAJ_T0043380.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19124281 19135382 + MGP_CBAJ_P0043380 Eif4g1 protein_coding protein_coding MGP_CBAJ_T0043381.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19124333 19130782 + MGP_CBAJ_P0043381 Eif4g1 protein_coding protein_coding MGP_CBAJ_T0043382.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19124333 19144427 + MGP_CBAJ_P0043382 Eif4g1 protein_coding protein_coding MGP_CBAJ_T0043383.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19124805 19144427 + MGP_CBAJ_P0043383 Eif4g1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043384.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19124908 19129309 + MGP_CBAJ_P0043384 Eif4g1 protein_coding protein_coding MGP_CBAJ_T0043385.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19124930 19144426 + MGP_CBAJ_P0043385 Eif4g1 protein_coding protein_coding MGP_CBAJ_T0043386.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19124949 19130174 + MGP_CBAJ_P0043386 Eif4g1 protein_coding protein_coding MGP_CBAJ_T0043387.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19125027 19144424 + MGP_CBAJ_P0043387 Eif4g1 protein_coding protein_coding MGP_CBAJ_T0043388.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19125324 19130170 + MGP_CBAJ_P0043388 Eif4g1 protein_coding protein_coding MGP_CBAJ_T0043389.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19125621 19130185 + MGP_CBAJ_P0043389 Eif4g1 protein_coding protein_coding MGP_CBAJ_T0043390.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19129786 19144424 + Eif4g1 protein_coding retained_intron MGP_CBAJ_T0043391.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19129916 19131096 + Eif4g1 protein_coding processed_transcript MGP_CBAJ_T0043392.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19132578 19133273 + Eif4g1 protein_coding retained_intron MGP_CBAJ_T0043393.1 MGP_CBAJ_G0022354.1 mouse_genomes_project 16 19140519 19141206 + Eif4g1 protein_coding retained_intron MGP_CBAJ_T0003615.1 MGP_CBAJ_G0003270.1 mouse_genomes_project 16 64133285 64139515 + Gm9017 antisense antisense MGP_CBAJ_T0003616.1 MGP_CBAJ_G0003270.1 mouse_genomes_project 16 64134274 64139795 + Gm9017 antisense antisense MGP_CBAJ_T0003588.1 MGP_CBAJ_G0003250.1 mouse_genomes_project 16 31286506 31288407 - Gm15743 antisense antisense MGP_CBAJ_T0003589.1 MGP_CBAJ_G0003250.1 mouse_genomes_project 16 31286506 31286922 - Gm15743 antisense antisense MGP_CBAJ_T0044597.1 MGP_CBAJ_G0022696.1 mouse_genomes_project 16 96486422 96495690 + MGP_CBAJ_P0044597 Krtap15 protein_coding protein_coding MGP_CBAJ_T0044599.1 MGP_CBAJ_G0022696.1 mouse_genomes_project 16 96495199 96496050 + MGP_CBAJ_P0044599 Krtap15 protein_coding protein_coding MGP_CBAJ_T0043254.1 MGP_CBAJ_G0022325.1 mouse_genomes_project 16 17137325 17191223 + MGP_CBAJ_P0043254 Hira protein_coding protein_coding MGP_CBAJ_T0043255.1 MGP_CBAJ_G0022325.1 mouse_genomes_project 16 17137354 17232280 + MGP_CBAJ_P0043255 Hira protein_coding protein_coding MGP_CBAJ_T0043256.1 MGP_CBAJ_G0022325.1 mouse_genomes_project 16 17137558 17174305 + Hira protein_coding retained_intron MGP_CBAJ_T0043257.1 MGP_CBAJ_G0022325.1 mouse_genomes_project 16 17137558 17198147 + MGP_CBAJ_P0043257 Hira protein_coding nonsense_mediated_decay MGP_CBAJ_T0043258.1 MGP_CBAJ_G0022325.1 mouse_genomes_project 16 17137700 17179784 + Hira protein_coding retained_intron MGP_CBAJ_T0043259.1 MGP_CBAJ_G0022325.1 mouse_genomes_project 16 17186270 17188855 + Hira protein_coding processed_transcript MGP_CBAJ_T0043260.1 MGP_CBAJ_G0022325.1 mouse_genomes_project 16 17188774 17198202 + Hira protein_coding retained_intron MGP_CBAJ_T0043261.1 MGP_CBAJ_G0022325.1 mouse_genomes_project 16 17196079 17210577 + Hira protein_coding processed_transcript MGP_CBAJ_T0097970.1 MGP_CBAJ_G0036243.1 mouse_genomes_project 16 11678310 11678420 - Gm26213 rRNA rRNA MGP_CBAJ_T0042822.1 MGP_CBAJ_G0022233.1 mouse_genomes_project 16 11150568 11303890 - MGP_CBAJ_P0042822 Parn protein_coding protein_coding MGP_CBAJ_T0043262.1 MGP_CBAJ_G0022326.1 mouse_genomes_project 16 17607088 17608183 - MGP_CBAJ_P0043262 Olfr164 protein_coding protein_coding MGP_CBAJ_T0044422.1 MGP_CBAJ_G0022634.1 mouse_genomes_project 16 62846978 62884014 - Crybg3 protein_coding retained_intron MGP_CBAJ_T0044423.1 MGP_CBAJ_G0022634.1 mouse_genomes_project 16 62848298 62916123 - MGP_CBAJ_P0044423 Crybg3 protein_coding protein_coding MGP_CBAJ_T0044424.1 MGP_CBAJ_G0022634.1 mouse_genomes_project 16 62884858 62898159 - Crybg3 protein_coding processed_transcript MGP_CBAJ_T0044425.1 MGP_CBAJ_G0022634.1 mouse_genomes_project 16 62902539 62914341 - MGP_CBAJ_P0044425 Crybg3 protein_coding protein_coding MGP_CBAJ_T0043590.1 MGP_CBAJ_G0022412.1 mouse_genomes_project 16 29977634 29991589 - MGP_CBAJ_P0043590 Lrrc15 protein_coding protein_coding MGP_CBAJ_T0044339.1 MGP_CBAJ_G0022595.1 mouse_genomes_project 16 59825965 59918635 - MGP_CBAJ_P0044339 Tmem45a protein_coding protein_coding MGP_CBAJ_T0044340.1 MGP_CBAJ_G0022595.1 mouse_genomes_project 16 59827290 59830537 - Tmem45a protein_coding processed_transcript MGP_CBAJ_T0044341.1 MGP_CBAJ_G0022595.1 mouse_genomes_project 16 59855463 59861577 - MGP_CBAJ_P0044341 Tmem45a protein_coding protein_coding MGP_CBAJ_T0042624.1 MGP_CBAJ_G0022180.1 mouse_genomes_project 16 1623852 1658987 - MGP_CBAJ_P0042624 Anks3 protein_coding protein_coding MGP_CBAJ_T0044602.1 MGP_CBAJ_G0022699.1 mouse_genomes_project 16 96545676 96546214 - MGP_CBAJ_P0044602 Krtap19-3 protein_coding protein_coding MGP_CBAJ_T0044468.1 MGP_CBAJ_G0022651.1 mouse_genomes_project 16 75437821 75710694 + MGP_CBAJ_P0044468 Gbe1 protein_coding protein_coding MGP_CBAJ_T0044469.1 MGP_CBAJ_G0022651.1 mouse_genomes_project 16 75437935 75494622 + Gbe1 protein_coding retained_intron MGP_CBAJ_T0044470.1 MGP_CBAJ_G0022651.1 mouse_genomes_project 16 75437936 75683021 + Gbe1 protein_coding retained_intron MGP_CBAJ_T0044471.1 MGP_CBAJ_G0022651.1 mouse_genomes_project 16 75437936 75682588 + MGP_CBAJ_P0044471 Gbe1 protein_coding protein_coding MGP_CBAJ_T0044472.1 MGP_CBAJ_G0022651.1 mouse_genomes_project 16 75437959 75710694 + MGP_CBAJ_P0044472 Gbe1 protein_coding protein_coding MGP_CBAJ_T0044473.1 MGP_CBAJ_G0022651.1 mouse_genomes_project 16 75438006 75710692 + MGP_CBAJ_P0044473 Gbe1 protein_coding protein_coding MGP_CBAJ_T0044474.1 MGP_CBAJ_G0022651.1 mouse_genomes_project 16 75700310 75710475 + Gbe1 protein_coding retained_intron MGP_CBAJ_T0042992.1 MGP_CBAJ_G0022271.1 mouse_genomes_project 16 15120516 15132924 - MGP_CBAJ_P0042992 2610318N02Rik protein_coding protein_coding MGP_CBAJ_T0043177.1 MGP_CBAJ_G0022310.1 mouse_genomes_project 16 16487445 16513927 - MGP_CBAJ_P0043177 Tango2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043178.1 MGP_CBAJ_G0022310.1 mouse_genomes_project 16 16487447 16536205 - MGP_CBAJ_P0043178 Tango2 protein_coding protein_coding MGP_CBAJ_T0043179.1 MGP_CBAJ_G0022310.1 mouse_genomes_project 16 16487843 16490766 - Tango2 protein_coding retained_intron MGP_CBAJ_T0043180.1 MGP_CBAJ_G0022310.1 mouse_genomes_project 16 16494607 16498074 - Tango2 protein_coding processed_transcript MGP_CBAJ_T0043181.1 MGP_CBAJ_G0022310.1 mouse_genomes_project 16 16497400 16499649 - Tango2 protein_coding retained_intron MGP_CBAJ_T0043182.1 MGP_CBAJ_G0022310.1 mouse_genomes_project 16 16497508 16544518 - MGP_CBAJ_P0043182 Tango2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043183.1 MGP_CBAJ_G0022310.1 mouse_genomes_project 16 16497516 16536180 - MGP_CBAJ_P0043183 Tango2 protein_coding protein_coding MGP_CBAJ_T0043184.1 MGP_CBAJ_G0022310.1 mouse_genomes_project 16 16499039 16513928 - Tango2 protein_coding retained_intron MGP_CBAJ_T0043185.1 MGP_CBAJ_G0022310.1 mouse_genomes_project 16 16502683 16513928 - Tango2 protein_coding retained_intron MGP_CBAJ_T0043186.1 MGP_CBAJ_G0022310.1 mouse_genomes_project 16 16510327 16544498 - Tango2 protein_coding retained_intron MGP_CBAJ_T0043538.1 MGP_CBAJ_G0022398.1 mouse_genomes_project 16 25922867 26084161 + MGP_CBAJ_P0043538 Il1rap protein_coding protein_coding MGP_CBAJ_T0043539.1 MGP_CBAJ_G0022398.1 mouse_genomes_project 16 25922905 26083250 + MGP_CBAJ_P0043539 Il1rap protein_coding protein_coding MGP_CBAJ_T0043540.1 MGP_CBAJ_G0022398.1 mouse_genomes_project 16 25922916 26048108 + MGP_CBAJ_P0043540 Il1rap protein_coding protein_coding MGP_CBAJ_T0043541.1 MGP_CBAJ_G0022398.1 mouse_genomes_project 16 25922920 26068554 + MGP_CBAJ_P0043541 Il1rap protein_coding protein_coding MGP_CBAJ_T0043542.1 MGP_CBAJ_G0022398.1 mouse_genomes_project 16 25966506 26065878 + MGP_CBAJ_P0043542 Il1rap protein_coding nonsense_mediated_decay MGP_CBAJ_T0043543.1 MGP_CBAJ_G0022398.1 mouse_genomes_project 16 26081330 26090569 + MGP_CBAJ_P0043543 Il1rap protein_coding nonsense_mediated_decay MGP_CBAJ_T0043544.1 MGP_CBAJ_G0022398.1 mouse_genomes_project 16 26087493 26088680 + Il1rap protein_coding processed_transcript MGP_CBAJ_T0101055.1 MGP_CBAJ_G0039278.1 mouse_genomes_project 16 38843192 38844282 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0043111.1 MGP_CBAJ_G0022292.1 mouse_genomes_project 16 15847884 15862290 + MGP_CBAJ_P0043111 Klhl22 protein_coding protein_coding MGP_CBAJ_T0043112.1 MGP_CBAJ_G0022292.1 mouse_genomes_project 16 15847887 15883618 + MGP_CBAJ_P0043112 Klhl22 protein_coding protein_coding MGP_CBAJ_T0043113.1 MGP_CBAJ_G0022292.1 mouse_genomes_project 16 15847904 15862332 + MGP_CBAJ_P0043113 Klhl22 protein_coding protein_coding MGP_CBAJ_T0043114.1 MGP_CBAJ_G0022292.1 mouse_genomes_project 16 15847929 15869603 + Klhl22 protein_coding retained_intron MGP_CBAJ_T0043115.1 MGP_CBAJ_G0022292.1 mouse_genomes_project 16 15847937 15883618 + MGP_CBAJ_P0043115 Klhl22 protein_coding protein_coding MGP_CBAJ_T0043116.1 MGP_CBAJ_G0022292.1 mouse_genomes_project 16 15848621 15862283 + MGP_CBAJ_P0043116 Klhl22 protein_coding protein_coding MGP_CBAJ_T0043117.1 MGP_CBAJ_G0022292.1 mouse_genomes_project 16 15851057 15883620 + MGP_CBAJ_P0043117 Klhl22 protein_coding protein_coding MGP_CBAJ_T0043118.1 MGP_CBAJ_G0022292.1 mouse_genomes_project 16 15852351 15862307 + Klhl22 protein_coding retained_intron MGP_CBAJ_T0043252.1 MGP_CBAJ_G0022324.1 mouse_genomes_project 16 17132307 17137056 - MGP_CBAJ_P0043252 Mrpl40 protein_coding protein_coding MGP_CBAJ_T0043253.1 MGP_CBAJ_G0022324.1 mouse_genomes_project 16 17132515 17136828 - MGP_CBAJ_P0043253 Mrpl40 protein_coding protein_coding MGP_CBAJ_T0100227.1 MGP_CBAJ_G0038482.1 mouse_genomes_project 16 76946481 76946612 + Gm22797 snoRNA snoRNA MGP_CBAJ_T0098289.1 MGP_CBAJ_G0036557.1 mouse_genomes_project 16 2799445 2828261 + 1700123O21Rik sense_intronic sense_intronic MGP_CBAJ_T0013008.1 MGP_CBAJ_G0011120.1 mouse_genomes_project 16 50123663 50124263 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0017229.1 MGP_CBAJ_G0015052.1 mouse_genomes_project 16 1976080 2020266 + Gm15983 processed_transcript processed_transcript MGP_CBAJ_T0010008.1 MGP_CBAJ_G0008146.1 mouse_genomes_project 16 21424391 21424498 + Mir6362 miRNA miRNA MGP_CBAJ_T0044236.1 MGP_CBAJ_G0022570.1 mouse_genomes_project 16 50803815 50805835 + MGP_CBAJ_P0044236 Retnlb protein_coding protein_coding MGP_CBAJ_T0044488.1 MGP_CBAJ_G0022655.1 mouse_genomes_project 16 81379461 81392218 + MGP_CBAJ_P0044488 Rbm11 protein_coding protein_coding MGP_CBAJ_T0044489.1 MGP_CBAJ_G0022655.1 mouse_genomes_project 16 81379461 81393352 + MGP_CBAJ_P0044489 Rbm11 protein_coding protein_coding MGP_CBAJ_T0044490.1 MGP_CBAJ_G0022655.1 mouse_genomes_project 16 81379508 81393348 + MGP_CBAJ_P0044490 Rbm11 protein_coding protein_coding MGP_CBAJ_T0043591.1 MGP_CBAJ_G0022413.1 mouse_genomes_project 16 30018281 30021375 - MGP_CBAJ_P0043591 Gp5 protein_coding protein_coding MGP_CBAJ_T0098948.1 MGP_CBAJ_G0037203.1 mouse_genomes_project 16 23516297 23516360 - Gm24440 snRNA snRNA MGP_CBAJ_T0003626.1 MGP_CBAJ_G0003279.1 mouse_genomes_project 16 107007387 107010206 - C030010L15Rik antisense antisense MGP_CBAJ_T0003627.1 MGP_CBAJ_G0003279.1 mouse_genomes_project 16 107007449 107007930 - C030010L15Rik antisense antisense MGP_CBAJ_T0044415.1 MGP_CBAJ_G0022632.1 mouse_genomes_project 16 62757250 62816045 + MGP_CBAJ_P0044415 Gabrr3 protein_coding protein_coding MGP_CBAJ_T0003598.1 MGP_CBAJ_G0003257.1 mouse_genomes_project 16 35315202 35318624 - 1700119H24Rik antisense antisense MGP_CBAJ_T0098965.1 MGP_CBAJ_G0037220.1 mouse_genomes_project 16 50934748 50934852 - Gm22576 snRNA snRNA MGP_CBAJ_T0010020.1 MGP_CBAJ_G0008158.1 mouse_genomes_project 16 45164942 45165025 + Mir568 miRNA miRNA MGP_CBAJ_T0044511.1 MGP_CBAJ_G0022664.1 mouse_genomes_project 16 84693739 84722786 - MGP_CBAJ_P0044511 D16Ertd472e protein_coding protein_coding MGP_CBAJ_T0044512.1 MGP_CBAJ_G0022664.1 mouse_genomes_project 16 84694416 84722786 - MGP_CBAJ_P0044512 D16Ertd472e protein_coding protein_coding MGP_CBAJ_T0044513.1 MGP_CBAJ_G0022664.1 mouse_genomes_project 16 84694688 84722786 - MGP_CBAJ_P0044513 D16Ertd472e protein_coding protein_coding MGP_CBAJ_T0043120.1 MGP_CBAJ_G0022294.1 mouse_genomes_project 16 15929514 15932603 - MGP_CBAJ_P0043120 Car15 protein_coding protein_coding MGP_CBAJ_T0044191.1 MGP_CBAJ_G0022555.1 mouse_genomes_project 16 47319916 47330990 + MGP_CBAJ_P0044191 Gcsam protein_coding protein_coding MGP_CBAJ_T0044192.1 MGP_CBAJ_G0022555.1 mouse_genomes_project 16 47319959 47332618 + MGP_CBAJ_P0044192 Gcsam protein_coding protein_coding MGP_CBAJ_T0043300.1 MGP_CBAJ_G0022343.1 mouse_genomes_project 16 18689082 18705513 - protein_coding processed_transcript MGP_CBAJ_T0043301.1 MGP_CBAJ_G0022343.1 mouse_genomes_project 16 18689082 18705570 - MGP_CBAJ_P0043301 protein_coding protein_coding MGP_CBAJ_T0043302.1 MGP_CBAJ_G0022343.1 mouse_genomes_project 16 18690365 18694906 - protein_coding processed_transcript MGP_CBAJ_T0043303.1 MGP_CBAJ_G0022343.1 mouse_genomes_project 16 18690471 18697446 - MGP_CBAJ_P0043303 protein_coding protein_coding MGP_CBAJ_T0043304.1 MGP_CBAJ_G0022343.1 mouse_genomes_project 16 18695715 18696747 - protein_coding processed_transcript MGP_CBAJ_T0006788.1 MGP_CBAJ_G0005587.1 mouse_genomes_project 16 104620046 104621377 + Gm15340 lincRNA lincRNA MGP_CBAJ_T0043905.1 MGP_CBAJ_G0022493.1 mouse_genomes_project 16 37577086 37608361 - MGP_CBAJ_P0043905 Slc15a2 protein_coding protein_coding MGP_CBAJ_T0043906.1 MGP_CBAJ_G0022493.1 mouse_genomes_project 16 37578686 37608219 - MGP_CBAJ_P0043906 Slc15a2 protein_coding protein_coding MGP_CBAJ_T0043907.1 MGP_CBAJ_G0022493.1 mouse_genomes_project 16 37578686 37608191 - MGP_CBAJ_P0043907 Slc15a2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043908.1 MGP_CBAJ_G0022493.1 mouse_genomes_project 16 37579224 37581667 - Slc15a2 protein_coding retained_intron MGP_CBAJ_T0043909.1 MGP_CBAJ_G0022493.1 mouse_genomes_project 16 37581366 37582316 - Slc15a2 protein_coding processed_transcript MGP_CBAJ_T0043910.1 MGP_CBAJ_G0022493.1 mouse_genomes_project 16 37582806 37583613 - Slc15a2 protein_coding retained_intron MGP_CBAJ_T0043911.1 MGP_CBAJ_G0022493.1 mouse_genomes_project 16 37584030 37589763 - Slc15a2 protein_coding retained_intron MGP_CBAJ_T0043912.1 MGP_CBAJ_G0022493.1 mouse_genomes_project 16 37584077 37589573 - Slc15a2 protein_coding retained_intron MGP_CBAJ_T0043913.1 MGP_CBAJ_G0022493.1 mouse_genomes_project 16 37586983 37590253 - Slc15a2 protein_coding processed_transcript MGP_CBAJ_T0043914.1 MGP_CBAJ_G0022493.1 mouse_genomes_project 16 37588107 37589489 - Slc15a2 protein_coding retained_intron MGP_CBAJ_T0043915.1 MGP_CBAJ_G0022493.1 mouse_genomes_project 16 37593714 37608339 - MGP_CBAJ_P0043915 Slc15a2 protein_coding protein_coding MGP_CBAJ_T0043916.1 MGP_CBAJ_G0022493.1 mouse_genomes_project 16 37593717 37608323 - MGP_CBAJ_P0043916 Slc15a2 protein_coding protein_coding MGP_CBAJ_T0043917.1 MGP_CBAJ_G0022493.1 mouse_genomes_project 16 37593911 37595119 - Slc15a2 protein_coding retained_intron MGP_CBAJ_T0043918.1 MGP_CBAJ_G0022493.1 mouse_genomes_project 16 37604784 37605864 - Slc15a2 protein_coding retained_intron MGP_CBAJ_T0100239.1 MGP_CBAJ_G0038494.1 mouse_genomes_project 16 95289139 95289227 - Gm23994 snoRNA snoRNA MGP_CBAJ_T0043940.1 MGP_CBAJ_G0022497.1 mouse_genomes_project 16 37778745 37806934 + MGP_CBAJ_P0043940 Hcls1 protein_coding protein_coding MGP_CBAJ_T0043941.1 MGP_CBAJ_G0022497.1 mouse_genomes_project 16 37781049 37805252 + MGP_CBAJ_P0043941 Hcls1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043942.1 MGP_CBAJ_G0022497.1 mouse_genomes_project 16 37798472 37800355 + Hcls1 protein_coding retained_intron MGP_CBAJ_T0044090.1 MGP_CBAJ_G0022534.1 mouse_genomes_project 16 45532967 45570948 - MGP_CBAJ_P0044090 Gramd1c protein_coding protein_coding MGP_CBAJ_T0044091.1 MGP_CBAJ_G0022534.1 mouse_genomes_project 16 45532972 45585734 - MGP_CBAJ_P0044091 Gramd1c protein_coding protein_coding MGP_CBAJ_T0044092.1 MGP_CBAJ_G0022534.1 mouse_genomes_project 16 45532972 45574345 - MGP_CBAJ_P0044092 Gramd1c protein_coding protein_coding MGP_CBAJ_T0044093.1 MGP_CBAJ_G0022534.1 mouse_genomes_project 16 45541646 45588149 - MGP_CBAJ_P0044093 Gramd1c protein_coding unknown_likely_coding MGP_CBAJ_T0010013.1 MGP_CBAJ_G0008151.1 mouse_genomes_project 16 32208563 32208697 - Mir1946a miRNA miRNA MGP_CBAJ_T0012944.1 MGP_CBAJ_G0011056.1 mouse_genomes_project 16 262490 264967 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0043266.1 MGP_CBAJ_G0022329.1 mouse_genomes_project 16 17840993 17841932 - MGP_CBAJ_P0043266 Olfr167 protein_coding protein_coding MGP_CBAJ_T0044969.1 MGP_CBAJ_G0022785.1 mouse_genomes_project 16 105201207 105259471 + MGP_CBAJ_P0044969 Igsf5 protein_coding protein_coding MGP_CBAJ_T0044970.1 MGP_CBAJ_G0022785.1 mouse_genomes_project 16 105201333 105247108 + MGP_CBAJ_P0044970 Igsf5 protein_coding protein_coding MGP_CBAJ_T0044971.1 MGP_CBAJ_G0022785.1 mouse_genomes_project 16 105201333 105247111 + MGP_CBAJ_P0044971 Igsf5 protein_coding protein_coding MGP_CBAJ_T0044972.1 MGP_CBAJ_G0022785.1 mouse_genomes_project 16 105201333 105377221 + MGP_CBAJ_P0044972 Igsf5 protein_coding protein_coding MGP_CBAJ_T0044973.1 MGP_CBAJ_G0022785.1 mouse_genomes_project 16 105228552 105246408 + Igsf5 protein_coding processed_transcript MGP_CBAJ_T0044974.1 MGP_CBAJ_G0022785.1 mouse_genomes_project 16 105239486 105259304 + MGP_CBAJ_P0044974 Igsf5 protein_coding protein_coding MGP_CBAJ_T0044820.1 MGP_CBAJ_G0022762.1 mouse_genomes_project 16 102137250 102144991 + MGP_CBAJ_P0044820 Cbr3 protein_coding protein_coding MGP_CBAJ_T0010041.1 MGP_CBAJ_G0008179.1 mouse_genomes_project 16 99615044 99615146 - Mir6367 miRNA miRNA MGP_CBAJ_T0043695.1 MGP_CBAJ_G0022438.1 mouse_genomes_project 16 32292914 32362525 + MGP_CBAJ_P0043695 Ubxn7 protein_coding protein_coding MGP_CBAJ_T0044507.1 MGP_CBAJ_G0022661.1 mouse_genomes_project 16 83917415 83923743 + MGP_CBAJ_P0044507 Gm17333 protein_coding protein_coding MGP_CBAJ_T0044255.1 MGP_CBAJ_G0022576.1 mouse_genomes_project 16 51793655 51863051 + MGP_CBAJ_P0044255 Ift57 protein_coding protein_coding MGP_CBAJ_T0044256.1 MGP_CBAJ_G0022576.1 mouse_genomes_project 16 51793725 51860556 + MGP_CBAJ_P0044256 Ift57 protein_coding protein_coding MGP_CBAJ_T0044257.1 MGP_CBAJ_G0022576.1 mouse_genomes_project 16 51793776 51808898 + Ift57 protein_coding processed_transcript MGP_CBAJ_T0044258.1 MGP_CBAJ_G0022576.1 mouse_genomes_project 16 51807951 51862042 + MGP_CBAJ_P0044258 Ift57 protein_coding protein_coding MGP_CBAJ_T0044205.1 MGP_CBAJ_G0022560.1 mouse_genomes_project 16 47464073 47574829 - MGP_CBAJ_P0044205 Phldb2 protein_coding protein_coding MGP_CBAJ_T0044206.1 MGP_CBAJ_G0022560.1 mouse_genomes_project 16 47464224 47574684 - MGP_CBAJ_P0044206 Phldb2 protein_coding protein_coding MGP_CBAJ_T0044207.1 MGP_CBAJ_G0022560.1 mouse_genomes_project 16 47464990 47523214 - MGP_CBAJ_P0044207 Phldb2 protein_coding protein_coding MGP_CBAJ_T0044208.1 MGP_CBAJ_G0022560.1 mouse_genomes_project 16 47465621 47574760 - MGP_CBAJ_P0044208 Phldb2 protein_coding unknown_likely_coding MGP_CBAJ_T0044209.1 MGP_CBAJ_G0022560.1 mouse_genomes_project 16 47472050 47690392 - MGP_CBAJ_P0044209 Phldb2 protein_coding protein_coding MGP_CBAJ_T0044210.1 MGP_CBAJ_G0022560.1 mouse_genomes_project 16 47480972 47490516 - Phldb2 protein_coding processed_transcript MGP_CBAJ_T0044211.1 MGP_CBAJ_G0022560.1 mouse_genomes_project 16 47495954 47508513 - Phldb2 protein_coding processed_transcript MGP_CBAJ_T0044212.1 MGP_CBAJ_G0022560.1 mouse_genomes_project 16 47499726 47513092 - MGP_CBAJ_P0044212 Phldb2 protein_coding protein_coding MGP_CBAJ_T0044213.1 MGP_CBAJ_G0022560.1 mouse_genomes_project 16 47552098 47690287 - MGP_CBAJ_P0044213 Phldb2 protein_coding protein_coding MGP_CBAJ_T0044214.1 MGP_CBAJ_G0022560.1 mouse_genomes_project 16 47552267 47574794 - Phldb2 protein_coding processed_transcript MGP_CBAJ_T0044215.1 MGP_CBAJ_G0022560.1 mouse_genomes_project 16 47636722 47637649 - Phldb2 protein_coding processed_transcript MGP_CBAJ_T0044216.1 MGP_CBAJ_G0022560.1 mouse_genomes_project 16 47636913 47690327 - Phldb2 protein_coding processed_transcript MGP_CBAJ_T0044338.1 MGP_CBAJ_G0022594.1 mouse_genomes_project 16 59737794 59817099 - MGP_CBAJ_P0044338 Adgrg7 protein_coding protein_coding MGP_CBAJ_T0043432.1 MGP_CBAJ_G0022363.1 mouse_genomes_project 16 20308088 20364351 - MGP_CBAJ_P0043432 2510009E07Rik protein_coding protein_coding MGP_CBAJ_T0043852.1 MGP_CBAJ_G0022472.1 mouse_genomes_project 16 36167262 36251675 - MGP_CBAJ_P0043852 Dirc2 protein_coding protein_coding MGP_CBAJ_T0043853.1 MGP_CBAJ_G0022472.1 mouse_genomes_project 16 36170761 36251649 - MGP_CBAJ_P0043853 Dirc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0010024.1 MGP_CBAJ_G0008162.1 mouse_genomes_project 16 52956152 52956266 + Mir6363 miRNA miRNA MGP_CBAJ_T0010001.1 MGP_CBAJ_G0008139.1 mouse_genomes_project 16 16516877 16516942 - Mir185 miRNA miRNA MGP_CBAJ_T0012945.1 MGP_CBAJ_G0011057.1 mouse_genomes_project 16 476345 476658 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000923.1 MGP_CBAJ_G0000857.1 mouse_genomes_project 16 44811949 44812296 - TEC TEC MGP_CBAJ_T0044146.1 MGP_CBAJ_G0022546.1 mouse_genomes_project 16 46535766 46584375 + MGP_CBAJ_P0044146 Cd200r2 protein_coding protein_coding MGP_CBAJ_T0043474.1 MGP_CBAJ_G0022379.1 mouse_genomes_project 16 21930764 21951179 + MGP_CBAJ_P0043474 protein_coding protein_coding MGP_CBAJ_T0043475.1 MGP_CBAJ_G0022379.1 mouse_genomes_project 16 21931237 21979774 + MGP_CBAJ_P0043475 protein_coding protein_coding MGP_CBAJ_T0043476.1 MGP_CBAJ_G0022379.1 mouse_genomes_project 16 21931482 21979774 + protein_coding processed_transcript MGP_CBAJ_T0012958.1 MGP_CBAJ_G0011070.1 mouse_genomes_project 16 10304569 10305904 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0043132.1 MGP_CBAJ_G0022299.1 mouse_genomes_project 16 16003230 16013832 - MGP_CBAJ_P0043132 Dgcr14 protein_coding protein_coding MGP_CBAJ_T0042501.1 MGP_CBAJ_G0022156.1 mouse_genomes_project 16 431813 469490 + MGP_CBAJ_P0042501 Gm20695 protein_coding protein_coding MGP_CBAJ_T0042514.1 MGP_CBAJ_G0022156.1 mouse_genomes_project 16 448250 469459 + Gm20695 protein_coding processed_transcript MGP_CBAJ_T0044514.1 MGP_CBAJ_G0022665.1 mouse_genomes_project 16 85142213 85164465 + MGP_CBAJ_P0044514 Chodl protein_coding protein_coding MGP_CBAJ_T0044515.1 MGP_CBAJ_G0022665.1 mouse_genomes_project 16 85142213 85159932 + MGP_CBAJ_P0044515 Chodl protein_coding protein_coding MGP_CBAJ_T0044516.1 MGP_CBAJ_G0022665.1 mouse_genomes_project 16 85142213 85162635 + MGP_CBAJ_P0044516 Chodl protein_coding protein_coding MGP_CBAJ_T0012981.1 MGP_CBAJ_G0011093.1 mouse_genomes_project 16 22130225 22131252 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0044298.1 MGP_CBAJ_G0022588.1 mouse_genomes_project 16 58927429 58941532 - MGP_CBAJ_P0044298 Pcnp protein_coding unknown_likely_coding MGP_CBAJ_T0044299.1 MGP_CBAJ_G0022588.1 mouse_genomes_project 16 58927429 58941491 - MGP_CBAJ_P0044299 Pcnp protein_coding protein_coding MGP_CBAJ_T0044300.1 MGP_CBAJ_G0022588.1 mouse_genomes_project 16 58927439 58941521 - MGP_CBAJ_P0044300 Pcnp protein_coding nonsense_mediated_decay MGP_CBAJ_T0044301.1 MGP_CBAJ_G0022588.1 mouse_genomes_project 16 58928734 58941511 - Pcnp protein_coding processed_transcript MGP_CBAJ_T0044302.1 MGP_CBAJ_G0022588.1 mouse_genomes_project 16 58928933 58941501 - MGP_CBAJ_P0044302 Pcnp protein_coding nonsense_mediated_decay MGP_CBAJ_T0044303.1 MGP_CBAJ_G0022588.1 mouse_genomes_project 16 58928966 58941531 - Pcnp protein_coding processed_transcript MGP_CBAJ_T0044304.1 MGP_CBAJ_G0022588.1 mouse_genomes_project 16 58929118 58936506 - MGP_CBAJ_P0044304 Pcnp protein_coding protein_coding MGP_CBAJ_T0044305.1 MGP_CBAJ_G0022588.1 mouse_genomes_project 16 58929959 58941521 - MGP_CBAJ_P0044305 Pcnp protein_coding protein_coding MGP_CBAJ_T0013011.1 MGP_CBAJ_G0011123.1 mouse_genomes_project 16 59777258 59777896 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0042621.1 MGP_CBAJ_G0022178.1 mouse_genomes_project 16 1565033 1620734 + MGP_CBAJ_P0042621 Mgrn1 protein_coding protein_coding MGP_CBAJ_T0042622.1 MGP_CBAJ_G0022178.1 mouse_genomes_project 16 1565033 1620734 + MGP_CBAJ_P0042622 Mgrn1 protein_coding protein_coding MGP_CBAJ_T0098968.1 MGP_CBAJ_G0037223.1 mouse_genomes_project 16 58443618 58443725 - Gm23003 snRNA snRNA MGP_CBAJ_T0043121.1 MGP_CBAJ_G0022295.1 mouse_genomes_project 16 15929515 15994191 - MGP_CBAJ_P0043121 Gm20518 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042899.1 MGP_CBAJ_G0022254.1 mouse_genomes_project 16 13458180 13511711 + Prkdc protein_coding retained_intron MGP_CBAJ_T0042900.1 MGP_CBAJ_G0022254.1 mouse_genomes_project 16 13458203 13674892 + MGP_CBAJ_P0042900 Prkdc protein_coding protein_coding MGP_CBAJ_T0043009.1 MGP_CBAJ_G0022276.1 mouse_genomes_project 16 15242466 15248253 + MGP_CBAJ_P0043009 Rimbp3 protein_coding protein_coding MGP_CBAJ_T0003607.1 MGP_CBAJ_G0003264.1 mouse_genomes_project 16 42709991 42731601 - Gm28750 antisense antisense MGP_CBAJ_T0042654.1 MGP_CBAJ_G0022190.1 mouse_genomes_project 16 1935427 1945897 - MGP_CBAJ_P0042654 AU021092 protein_coding protein_coding MGP_CBAJ_T0044595.1 MGP_CBAJ_G0022694.1 mouse_genomes_project 16 96444611 96445313 + MGP_CBAJ_P0044595 Gm5965 protein_coding protein_coding MGP_CBAJ_T0042560.1 MGP_CBAJ_G0022165.1 mouse_genomes_project 16 894788 927183 - MGP_CBAJ_P0042560 Adcy9 protein_coding unknown_likely_coding MGP_CBAJ_T0042561.1 MGP_CBAJ_G0022165.1 mouse_genomes_project 16 897437 1041449 - MGP_CBAJ_P0042561 Adcy9 protein_coding protein_coding MGP_CBAJ_T0042562.1 MGP_CBAJ_G0022165.1 mouse_genomes_project 16 897437 1040759 - MGP_CBAJ_P0042562 Adcy9 protein_coding protein_coding MGP_CBAJ_T0042563.1 MGP_CBAJ_G0022165.1 mouse_genomes_project 16 897453 1040538 - MGP_CBAJ_P0042563 Adcy9 protein_coding protein_coding MGP_CBAJ_T0043833.1 MGP_CBAJ_G0022465.1 mouse_genomes_project 16 35056314 35091630 + MGP_CBAJ_P0043833 Ccdc14 protein_coding protein_coding MGP_CBAJ_T0012982.1 MGP_CBAJ_G0011094.1 mouse_genomes_project 16 22728949 22730536 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0042691.1 MGP_CBAJ_G0022201.1 mouse_genomes_project 16 5717126 5832421 - MGP_CBAJ_P0042691 Usp7 protein_coding protein_coding MGP_CBAJ_T0042692.1 MGP_CBAJ_G0022201.1 mouse_genomes_project 16 5717131 5765840 - MGP_CBAJ_P0042692 Usp7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042693.1 MGP_CBAJ_G0022201.1 mouse_genomes_project 16 5717677 5765763 - MGP_CBAJ_P0042693 Usp7 protein_coding protein_coding MGP_CBAJ_T0042694.1 MGP_CBAJ_G0022201.1 mouse_genomes_project 16 5718311 5749148 - Usp7 protein_coding processed_transcript MGP_CBAJ_T0042695.1 MGP_CBAJ_G0022201.1 mouse_genomes_project 16 5723708 5726362 - Usp7 protein_coding retained_intron MGP_CBAJ_T0042696.1 MGP_CBAJ_G0022201.1 mouse_genomes_project 16 5724208 5725113 - Usp7 protein_coding retained_intron MGP_CBAJ_T0042697.1 MGP_CBAJ_G0022201.1 mouse_genomes_project 16 5725007 5726064 - Usp7 protein_coding retained_intron MGP_CBAJ_T0042698.1 MGP_CBAJ_G0022201.1 mouse_genomes_project 16 5725182 5734259 - MGP_CBAJ_P0042698 Usp7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042699.1 MGP_CBAJ_G0022201.1 mouse_genomes_project 16 5727688 5731311 - Usp7 protein_coding retained_intron MGP_CBAJ_T0042700.1 MGP_CBAJ_G0022201.1 mouse_genomes_project 16 5730995 5734457 - Usp7 protein_coding retained_intron MGP_CBAJ_T0042701.1 MGP_CBAJ_G0022201.1 mouse_genomes_project 16 5732474 5732839 - Usp7 protein_coding retained_intron MGP_CBAJ_T0042702.1 MGP_CBAJ_G0022201.1 mouse_genomes_project 16 5732483 5733749 - Usp7 protein_coding retained_intron MGP_CBAJ_T0042703.1 MGP_CBAJ_G0022201.1 mouse_genomes_project 16 5733489 5734358 - Usp7 protein_coding retained_intron MGP_CBAJ_T0044426.1 MGP_CBAJ_G0022635.1 mouse_genomes_project 16 62977398 63009703 - MGP_CBAJ_P0044426 Arl6 protein_coding protein_coding MGP_CBAJ_T0044427.1 MGP_CBAJ_G0022635.1 mouse_genomes_project 16 62977777 63009927 - MGP_CBAJ_P0044427 Arl6 protein_coding protein_coding MGP_CBAJ_T0044428.1 MGP_CBAJ_G0022635.1 mouse_genomes_project 16 62978054 63003077 - MGP_CBAJ_P0044428 Arl6 protein_coding protein_coding MGP_CBAJ_T0044429.1 MGP_CBAJ_G0022635.1 mouse_genomes_project 16 62990035 63009665 - MGP_CBAJ_P0044429 Arl6 protein_coding protein_coding MGP_CBAJ_T0044273.1 MGP_CBAJ_G0022581.1 mouse_genomes_project 16 54655512 54873249 - MGP_CBAJ_P0044273 Alcam protein_coding protein_coding MGP_CBAJ_T0044274.1 MGP_CBAJ_G0022581.1 mouse_genomes_project 16 54657607 54699270 - MGP_CBAJ_P0044274 Alcam protein_coding protein_coding MGP_CBAJ_T0044275.1 MGP_CBAJ_G0022581.1 mouse_genomes_project 16 54657987 54871636 - MGP_CBAJ_P0044275 Alcam protein_coding protein_coding MGP_CBAJ_T0044276.1 MGP_CBAJ_G0022581.1 mouse_genomes_project 16 54659708 54675580 - Alcam protein_coding retained_intron MGP_CBAJ_T0044277.1 MGP_CBAJ_G0022581.1 mouse_genomes_project 16 54659741 54677634 - Alcam protein_coding retained_intron MGP_CBAJ_T0044278.1 MGP_CBAJ_G0022581.1 mouse_genomes_project 16 54674679 54871636 - MGP_CBAJ_P0044278 Alcam protein_coding protein_coding MGP_CBAJ_T0044279.1 MGP_CBAJ_G0022581.1 mouse_genomes_project 16 54707598 54871825 - MGP_CBAJ_P0044279 Alcam protein_coding protein_coding MGP_CBAJ_T0006779.1 MGP_CBAJ_G0005581.1 mouse_genomes_project 16 98692547 98694158 + Gm17518 lincRNA lincRNA MGP_CBAJ_T0042747.1 MGP_CBAJ_G0022215.1 mouse_genomes_project 16 8117031 8117438 - MGP_CBAJ_P0042747 Prm3 protein_coding protein_coding MGP_CBAJ_T0044550.1 MGP_CBAJ_G0022676.1 mouse_genomes_project 16 94819018 94842460 + MGP_CBAJ_P0044550 N6amt1 protein_coding protein_coding MGP_CBAJ_T0044551.1 MGP_CBAJ_G0022676.1 mouse_genomes_project 16 94819035 94840559 + MGP_CBAJ_P0044551 N6amt1 protein_coding protein_coding MGP_CBAJ_T0044552.1 MGP_CBAJ_G0022676.1 mouse_genomes_project 16 94819037 94842574 + MGP_CBAJ_P0044552 N6amt1 protein_coding protein_coding MGP_CBAJ_T0012947.1 MGP_CBAJ_G0011059.1 mouse_genomes_project 16 582741 582819 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000914.1 MGP_CBAJ_G0000849.1 mouse_genomes_project 16 458797 459165 - TEC TEC MGP_CBAJ_T0000915.1 MGP_CBAJ_G0000849.1 mouse_genomes_project 16 458829 459165 - TEC TEC MGP_CBAJ_T0043635.1 MGP_CBAJ_G0022423.1 mouse_genomes_project 16 31547170 31773556 + MGP_CBAJ_P0043635 Dlg1 protein_coding protein_coding MGP_CBAJ_T0043636.1 MGP_CBAJ_G0022423.1 mouse_genomes_project 16 31547638 31772052 + MGP_CBAJ_P0043636 Dlg1 protein_coding protein_coding MGP_CBAJ_T0043637.1 MGP_CBAJ_G0022423.1 mouse_genomes_project 16 31547664 31773562 + MGP_CBAJ_P0043637 Dlg1 protein_coding protein_coding MGP_CBAJ_T0043638.1 MGP_CBAJ_G0022423.1 mouse_genomes_project 16 31547684 31773555 + MGP_CBAJ_P0043638 Dlg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043639.1 MGP_CBAJ_G0022423.1 mouse_genomes_project 16 31547768 31773552 + MGP_CBAJ_P0043639 Dlg1 protein_coding protein_coding MGP_CBAJ_T0043640.1 MGP_CBAJ_G0022423.1 mouse_genomes_project 16 31547879 31772890 + MGP_CBAJ_P0043640 Dlg1 protein_coding protein_coding MGP_CBAJ_T0043641.1 MGP_CBAJ_G0022423.1 mouse_genomes_project 16 31566398 31670029 + Dlg1 protein_coding retained_intron MGP_CBAJ_T0043642.1 MGP_CBAJ_G0022423.1 mouse_genomes_project 16 31577620 31771987 + MGP_CBAJ_P0043642 Dlg1 protein_coding unknown_likely_coding MGP_CBAJ_T0043643.1 MGP_CBAJ_G0022423.1 mouse_genomes_project 16 31644010 31772467 + MGP_CBAJ_P0043643 Dlg1 protein_coding protein_coding MGP_CBAJ_T0043644.1 MGP_CBAJ_G0022423.1 mouse_genomes_project 16 31687885 31736551 + MGP_CBAJ_P0043644 Dlg1 protein_coding protein_coding MGP_CBAJ_T0043645.1 MGP_CBAJ_G0022423.1 mouse_genomes_project 16 31723054 31730218 + Dlg1 protein_coding retained_intron MGP_CBAJ_T0043646.1 MGP_CBAJ_G0022423.1 mouse_genomes_project 16 31729996 31755717 + MGP_CBAJ_P0043646 Dlg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043647.1 MGP_CBAJ_G0022423.1 mouse_genomes_project 16 31741054 31755672 + Dlg1 protein_coding retained_intron MGP_CBAJ_T0043648.1 MGP_CBAJ_G0022423.1 mouse_genomes_project 16 31749037 31763407 + Dlg1 protein_coding retained_intron MGP_CBAJ_T0043649.1 MGP_CBAJ_G0022423.1 mouse_genomes_project 16 31767677 31772054 + Dlg1 protein_coding retained_intron MGP_CBAJ_T0101058.1 MGP_CBAJ_G0039280.1 mouse_genomes_project 16 82767782 82797560 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101059.1 MGP_CBAJ_G0039280.1 mouse_genomes_project 16 82769570 82769939 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0017266.1 MGP_CBAJ_G0015067.1 mouse_genomes_project 16 99027217 99032495 + 4930404I05Rik processed_transcript processed_transcript MGP_CBAJ_T0017267.1 MGP_CBAJ_G0015067.1 mouse_genomes_project 16 99029689 99032733 + 4930404I05Rik processed_transcript processed_transcript MGP_CBAJ_T0101412.1 MGP_CBAJ_G0039463.1 mouse_genomes_project 16 18911304 18916848 + unitary_pseudogene unitary_pseudogene MGP_CBAJ_T0043855.1 MGP_CBAJ_G0022474.1 mouse_genomes_project 16 36319075 36366780 - MGP_CBAJ_P0043855 Parp14 protein_coding protein_coding MGP_CBAJ_T0043856.1 MGP_CBAJ_G0022474.1 mouse_genomes_project 16 36347982 36366625 - Parp14 protein_coding retained_intron MGP_CBAJ_T0043857.1 MGP_CBAJ_G0022474.1 mouse_genomes_project 16 36358408 36366625 - Parp14 protein_coding retained_intron MGP_CBAJ_T0043986.1 MGP_CBAJ_G0022509.1 mouse_genomes_project 16 39079612 39254184 + MGP_CBAJ_P0043986 Gsk3b protein_coding protein_coding MGP_CBAJ_T0043987.1 MGP_CBAJ_G0022509.1 mouse_genomes_project 16 39080899 39248880 + MGP_CBAJ_P0043987 Gsk3b protein_coding protein_coding MGP_CBAJ_T0043988.1 MGP_CBAJ_G0022509.1 mouse_genomes_project 16 39134900 39189787 + Gsk3b protein_coding processed_transcript MGP_CBAJ_T0043989.1 MGP_CBAJ_G0022509.1 mouse_genomes_project 16 39135856 39207697 + Gsk3b protein_coding retained_intron MGP_CBAJ_T0044587.1 MGP_CBAJ_G0022686.1 mouse_genomes_project 16 96249982 96251554 - MGP_CBAJ_P0044587 Krtap24-1 protein_coding protein_coding MGP_CBAJ_T0098290.1 MGP_CBAJ_G0036558.1 mouse_genomes_project 16 12069780 12070992 - Gm15869 sense_intronic sense_intronic MGP_CBAJ_T0044390.1 MGP_CBAJ_G0022615.1 mouse_genomes_project 16 62095582 62115704 - MGP_CBAJ_P0044390 protein_coding protein_coding MGP_CBAJ_T0044391.1 MGP_CBAJ_G0022615.1 mouse_genomes_project 16 62097045 62105222 - MGP_CBAJ_P0044391 protein_coding protein_coding MGP_CBAJ_T0042569.1 MGP_CBAJ_G0022168.1 mouse_genomes_project 16 1237196 1258402 + MGP_CBAJ_P0042569 Glis2 protein_coding protein_coding MGP_CBAJ_T0042570.1 MGP_CBAJ_G0022168.1 mouse_genomes_project 16 1243646 1252858 + MGP_CBAJ_P0042570 Glis2 protein_coding protein_coding MGP_CBAJ_T0042571.1 MGP_CBAJ_G0022168.1 mouse_genomes_project 16 1251174 1258387 + Glis2 protein_coding retained_intron MGP_CBAJ_T0042572.1 MGP_CBAJ_G0022168.1 mouse_genomes_project 16 1253854 1256101 + Glis2 protein_coding retained_intron MGP_CBAJ_T0042573.1 MGP_CBAJ_G0022168.1 mouse_genomes_project 16 1254072 1267369 + Glis2 protein_coding processed_transcript MGP_CBAJ_T0043831.1 MGP_CBAJ_G0022464.1 mouse_genomes_project 16 35008264 35040318 + MGP_CBAJ_P0043831 Ropn1 protein_coding protein_coding MGP_CBAJ_T0043832.1 MGP_CBAJ_G0022464.1 mouse_genomes_project 16 35009531 35041737 + MGP_CBAJ_P0043832 Ropn1 protein_coding protein_coding MGP_CBAJ_T0012946.1 MGP_CBAJ_G0011058.1 mouse_genomes_project 16 477529 478095 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0043071.1 MGP_CBAJ_G0022288.1 mouse_genomes_project 16 15638427 15642143 - Slc7a4 protein_coding retained_intron MGP_CBAJ_T0043072.1 MGP_CBAJ_G0022288.1 mouse_genomes_project 16 15638748 15642170 - MGP_CBAJ_P0043072 Slc7a4 protein_coding protein_coding MGP_CBAJ_T0043073.1 MGP_CBAJ_G0022288.1 mouse_genomes_project 16 15640874 15642103 - MGP_CBAJ_P0043073 Slc7a4 protein_coding protein_coding MGP_CBAJ_T0043074.1 MGP_CBAJ_G0022288.1 mouse_genomes_project 16 15640984 15641692 - MGP_CBAJ_P0043074 Slc7a4 protein_coding protein_coding MGP_CBAJ_T0043075.1 MGP_CBAJ_G0022288.1 mouse_genomes_project 16 15641160 15642143 - MGP_CBAJ_P0043075 Slc7a4 protein_coding protein_coding MGP_CBAJ_T0044138.1 MGP_CBAJ_G0022543.1 mouse_genomes_project 16 46380614 46390211 - MGP_CBAJ_P0044138 Gtpbp8 protein_coding protein_coding MGP_CBAJ_T0044139.1 MGP_CBAJ_G0022543.1 mouse_genomes_project 16 46382988 46390207 - MGP_CBAJ_P0044139 Gtpbp8 protein_coding protein_coding MGP_CBAJ_T0044140.1 MGP_CBAJ_G0022543.1 mouse_genomes_project 16 46383111 46390131 - MGP_CBAJ_P0044140 Gtpbp8 protein_coding protein_coding MGP_CBAJ_T0044141.1 MGP_CBAJ_G0022543.1 mouse_genomes_project 16 46387655 46390157 - MGP_CBAJ_P0044141 Gtpbp8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0013002.1 MGP_CBAJ_G0011114.1 mouse_genomes_project 16 44816608 44817606 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097979.1 MGP_CBAJ_G0036252.1 mouse_genomes_project 16 106461827 106461936 - Gm24777 rRNA rRNA MGP_CBAJ_T0044051.1 MGP_CBAJ_G0022527.1 mouse_genomes_project 16 43657294 43761527 - MGP_CBAJ_P0044051 Gap43 protein_coding protein_coding MGP_CBAJ_T0044052.1 MGP_CBAJ_G0022527.1 mouse_genomes_project 16 43657310 43687360 - Gap43 protein_coding processed_transcript MGP_CBAJ_T0042759.1 MGP_CBAJ_G0022222.1 mouse_genomes_project 16 8441382 8501960 - MGP_CBAJ_P0042759 Txndc11 protein_coding protein_coding MGP_CBAJ_T0042760.1 MGP_CBAJ_G0022222.1 mouse_genomes_project 16 8441896 8451265 - Txndc11 protein_coding retained_intron MGP_CBAJ_T0042761.1 MGP_CBAJ_G0022222.1 mouse_genomes_project 16 8451231 8453824 - Txndc11 protein_coding processed_transcript MGP_CBAJ_T0042762.1 MGP_CBAJ_G0022222.1 mouse_genomes_project 16 8451990 8501921 - MGP_CBAJ_P0042762 Txndc11 protein_coding protein_coding MGP_CBAJ_T0042763.1 MGP_CBAJ_G0022222.1 mouse_genomes_project 16 8453706 8501883 - MGP_CBAJ_P0042763 Txndc11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042764.1 MGP_CBAJ_G0022222.1 mouse_genomes_project 16 8454743 8490604 - Txndc11 protein_coding processed_transcript MGP_CBAJ_T0042765.1 MGP_CBAJ_G0022222.1 mouse_genomes_project 16 8471122 8501863 - MGP_CBAJ_P0042765 Txndc11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042766.1 MGP_CBAJ_G0022222.1 mouse_genomes_project 16 8472468 8501960 - MGP_CBAJ_P0042766 Txndc11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042767.1 MGP_CBAJ_G0022222.1 mouse_genomes_project 16 8481939 8501923 - MGP_CBAJ_P0042767 Txndc11 protein_coding protein_coding MGP_CBAJ_T0003581.1 MGP_CBAJ_G0003243.1 mouse_genomes_project 16 15100075 15103611 + Gm15585 antisense antisense MGP_CBAJ_T0044643.1 MGP_CBAJ_G0022724.1 mouse_genomes_project 16 98093321 98098902 + MGP_CBAJ_P0044643 Sod1 protein_coding protein_coding MGP_CBAJ_T0006730.1 MGP_CBAJ_G0005545.1 mouse_genomes_project 16 10363173 10403314 + 1700003L19Rik lincRNA lincRNA MGP_CBAJ_T0044790.1 MGP_CBAJ_G0022751.1 mouse_genomes_project 16 100222899 100279130 + MGP_CBAJ_P0044790 Mrps6 protein_coding protein_coding MGP_CBAJ_T0044793.1 MGP_CBAJ_G0022751.1 mouse_genomes_project 16 100273270 100279130 + Mrps6 protein_coding processed_transcript MGP_CBAJ_T0017244.1 MGP_CBAJ_G0015061.1 mouse_genomes_project 16 58868585 58890983 + processed_transcript processed_transcript MGP_CBAJ_T0042750.1 MGP_CBAJ_G0022217.1 mouse_genomes_project 16 8122985 8123546 - MGP_CBAJ_P0042750 Prm1 protein_coding protein_coding MGP_CBAJ_T0012951.1 MGP_CBAJ_G0011063.1 mouse_genomes_project 16 5642505 5643040 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0044586.1 MGP_CBAJ_G0022685.1 mouse_genomes_project 16 96192391 96194747 - MGP_CBAJ_P0044586 Cldn8 protein_coding protein_coding MGP_CBAJ_T0010028.1 MGP_CBAJ_G0008166.1 mouse_genomes_project 16 61937361 61937457 - Gm27564 miRNA miRNA MGP_CBAJ_T0042973.1 MGP_CBAJ_G0022269.1 mouse_genomes_project 16 15074859 15093997 + MGP_CBAJ_P0042973 Ypel1 protein_coding protein_coding MGP_CBAJ_T0042974.1 MGP_CBAJ_G0022269.1 mouse_genomes_project 16 15075321 15093602 + Ypel1 protein_coding processed_transcript MGP_CBAJ_T0042975.1 MGP_CBAJ_G0022269.1 mouse_genomes_project 16 15075361 15083774 + Ypel1 protein_coding retained_intron MGP_CBAJ_T0042976.1 MGP_CBAJ_G0022269.1 mouse_genomes_project 16 15075362 15089355 + MGP_CBAJ_P0042976 Ypel1 protein_coding protein_coding MGP_CBAJ_T0042977.1 MGP_CBAJ_G0022269.1 mouse_genomes_project 16 15075389 15094306 + MGP_CBAJ_P0042977 Ypel1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042978.1 MGP_CBAJ_G0022269.1 mouse_genomes_project 16 15075392 15089437 + MGP_CBAJ_P0042978 Ypel1 protein_coding protein_coding MGP_CBAJ_T0042979.1 MGP_CBAJ_G0022269.1 mouse_genomes_project 16 15075467 15089955 + MGP_CBAJ_P0042979 Ypel1 protein_coding protein_coding MGP_CBAJ_T0042655.1 MGP_CBAJ_G0022191.1 mouse_genomes_project 16 1955233 1966506 + MGP_CBAJ_P0042655 Alg1 protein_coding protein_coding MGP_CBAJ_T0042656.1 MGP_CBAJ_G0022191.1 mouse_genomes_project 16 1955250 1961341 + Alg1 protein_coding retained_intron MGP_CBAJ_T0042657.1 MGP_CBAJ_G0022191.1 mouse_genomes_project 16 1955250 1966515 + MGP_CBAJ_P0042657 Alg1 protein_coding protein_coding MGP_CBAJ_T0042658.1 MGP_CBAJ_G0022191.1 mouse_genomes_project 16 1956782 1962121 + Alg1 protein_coding processed_transcript MGP_CBAJ_T0042659.1 MGP_CBAJ_G0022191.1 mouse_genomes_project 16 1961676 1965327 + Alg1 protein_coding retained_intron MGP_CBAJ_T0044592.1 MGP_CBAJ_G0022691.1 mouse_genomes_project 16 96385083 96385831 + MGP_CBAJ_P0044592 Krtap13-1 protein_coding protein_coding MGP_CBAJ_T0043229.1 MGP_CBAJ_G0022316.1 mouse_genomes_project 16 16828046 16833303 - MGP_CBAJ_P0043229 Tbx1 protein_coding protein_coding MGP_CBAJ_T0101052.1 MGP_CBAJ_G0039275.1 mouse_genomes_project 16 832384 834351 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0012967.1 MGP_CBAJ_G0011079.1 mouse_genomes_project 16 15089259 15089952 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0042688.1 MGP_CBAJ_G0022199.1 mouse_genomes_project 16 5682865 5696432 - MGP_CBAJ_P0042688 Carhsp1 protein_coding protein_coding MGP_CBAJ_T0044449.1 MGP_CBAJ_G0022643.1 mouse_genomes_project 16 68936104 68954407 - protein_coding processed_transcript MGP_CBAJ_T0043704.1 MGP_CBAJ_G0022443.1 mouse_genomes_project 16 32471005 32482441 + MGP_CBAJ_P0043704 Zdhhc19 protein_coding protein_coding MGP_CBAJ_T0043705.1 MGP_CBAJ_G0022443.1 mouse_genomes_project 16 32474408 32554183 + Zdhhc19 protein_coding processed_transcript MGP_CBAJ_T0042876.1 MGP_CBAJ_G0022245.1 mouse_genomes_project 16 11943449 12030583 - MGP_CBAJ_P0042876 Myh11 protein_coding unknown_likely_coding MGP_CBAJ_T0042877.1 MGP_CBAJ_G0022245.1 mouse_genomes_project 16 11943450 12043022 - MGP_CBAJ_P0042877 Myh11 protein_coding protein_coding MGP_CBAJ_T0042548.1 MGP_CBAJ_G0022163.1 mouse_genomes_project 16 613443 656988 - MGP_CBAJ_P0042548 Trap1 protein_coding protein_coding MGP_CBAJ_T0042549.1 MGP_CBAJ_G0022163.1 mouse_genomes_project 16 613612 618171 - Trap1 protein_coding processed_transcript MGP_CBAJ_T0042550.1 MGP_CBAJ_G0022163.1 mouse_genomes_project 16 632733 656936 - MGP_CBAJ_P0042550 Trap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042551.1 MGP_CBAJ_G0022163.1 mouse_genomes_project 16 644500 656988 - Trap1 protein_coding retained_intron MGP_CBAJ_T0100196.1 MGP_CBAJ_G0038451.1 mouse_genomes_project 16 17736856 17736988 + Gm25762 snoRNA snoRNA MGP_CBAJ_T0045003.1 MGP_CBAJ_G0022795.1 mouse_genomes_project 16 106857991 106933410 - MGP_CBAJ_P0045003 C2cd2 protein_coding protein_coding MGP_CBAJ_T0043686.1 MGP_CBAJ_G0022434.1 mouse_genomes_project 16 32167117 32188542 - MGP_CBAJ_P0043686 Fbxo45 protein_coding protein_coding MGP_CBAJ_T0044347.1 MGP_CBAJ_G0022600.1 mouse_genomes_project 16 60330894 60361300 - MGP_CBAJ_P0044347 Tmem30c protein_coding protein_coding MGP_CBAJ_T0044348.1 MGP_CBAJ_G0022600.1 mouse_genomes_project 16 60331168 60361286 - MGP_CBAJ_P0044348 Tmem30c protein_coding protein_coding MGP_CBAJ_T0044349.1 MGP_CBAJ_G0022600.1 mouse_genomes_project 16 60334071 60361286 - MGP_CBAJ_P0044349 Tmem30c protein_coding protein_coding MGP_CBAJ_T0042895.1 MGP_CBAJ_G0022250.1 mouse_genomes_project 16 12472857 12476407 + MGP_CBAJ_P0042895 Snai2 protein_coding protein_coding MGP_CBAJ_T0009996.1 MGP_CBAJ_G0008134.1 mouse_genomes_project 16 15131878 15131960 - Mir130b miRNA miRNA MGP_CBAJ_T0043966.1 MGP_CBAJ_G0022502.1 mouse_genomes_project 16 38450248 38484020 + MGP_CBAJ_P0043966 Rabl3 protein_coding protein_coding MGP_CBAJ_T0043967.1 MGP_CBAJ_G0022502.1 mouse_genomes_project 16 38450263 38484017 + MGP_CBAJ_P0043967 Rabl3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043968.1 MGP_CBAJ_G0022502.1 mouse_genomes_project 16 38450268 38475717 + Rabl3 protein_coding retained_intron MGP_CBAJ_T0043969.1 MGP_CBAJ_G0022502.1 mouse_genomes_project 16 38475402 38479599 + Rabl3 protein_coding retained_intron MGP_CBAJ_T0042906.1 MGP_CBAJ_G0022257.1 mouse_genomes_project 16 14102039 14115999 + MGP_CBAJ_P0042906 Pkp2 protein_coding protein_coding MGP_CBAJ_T0042907.1 MGP_CBAJ_G0022257.1 mouse_genomes_project 16 14102039 14137847 + MGP_CBAJ_P0042907 Pkp2 protein_coding protein_coding MGP_CBAJ_T0042908.1 MGP_CBAJ_G0022257.1 mouse_genomes_project 16 14102039 14163925 + MGP_CBAJ_P0042908 Pkp2 protein_coding protein_coding MGP_CBAJ_T0009994.1 MGP_CBAJ_G0008132.1 mouse_genomes_project 16 11875840 11875906 - Gm27671 miRNA miRNA MGP_CBAJ_T0044600.1 MGP_CBAJ_G0022697.1 mouse_genomes_project 16 96536508 96537001 - MGP_CBAJ_P0044600 Krtap19-1 protein_coding protein_coding MGP_CBAJ_T0043035.1 MGP_CBAJ_G0022280.1 mouse_genomes_project 16 15377974 15390163 + MGP_CBAJ_P0043035 Serpind1 protein_coding protein_coding MGP_CBAJ_T0043036.1 MGP_CBAJ_G0022280.1 mouse_genomes_project 16 15377986 15390162 + MGP_CBAJ_P0043036 Serpind1 protein_coding protein_coding MGP_CBAJ_T0043473.1 MGP_CBAJ_G0022378.1 mouse_genomes_project 16 21797630 21811297 + MGP_CBAJ_P0043473 Hrg protein_coding protein_coding MGP_CBAJ_T0044919.1 MGP_CBAJ_G0022777.1 mouse_genomes_project 16 104383571 104405244 + MGP_CBAJ_P0044919 Ets2 protein_coding protein_coding MGP_CBAJ_T0044920.1 MGP_CBAJ_G0022777.1 mouse_genomes_project 16 104383951 104395141 + Ets2 protein_coding retained_intron MGP_CBAJ_T0044921.1 MGP_CBAJ_G0022777.1 mouse_genomes_project 16 104383996 104397560 + Ets2 protein_coding retained_intron MGP_CBAJ_T0044922.1 MGP_CBAJ_G0022777.1 mouse_genomes_project 16 104387832 104400268 + MGP_CBAJ_P0044922 Ets2 protein_coding protein_coding MGP_CBAJ_T0044923.1 MGP_CBAJ_G0022777.1 mouse_genomes_project 16 104400048 104403312 + Ets2 protein_coding retained_intron MGP_CBAJ_T0042635.1 MGP_CBAJ_G0022184.1 mouse_genomes_project 16 1717719 1722722 - MGP_CBAJ_P0042635 Rogdi protein_coding protein_coding MGP_CBAJ_T0042636.1 MGP_CBAJ_G0022184.1 mouse_genomes_project 16 1717719 1722732 - MGP_CBAJ_P0042636 Rogdi protein_coding protein_coding MGP_CBAJ_T0042637.1 MGP_CBAJ_G0022184.1 mouse_genomes_project 16 1717744 1722722 - MGP_CBAJ_P0042637 Rogdi protein_coding protein_coding MGP_CBAJ_T0042638.1 MGP_CBAJ_G0022184.1 mouse_genomes_project 16 1717974 1719864 - Rogdi protein_coding retained_intron MGP_CBAJ_T0042639.1 MGP_CBAJ_G0022184.1 mouse_genomes_project 16 1718213 1719321 - Rogdi protein_coding retained_intron MGP_CBAJ_T0042640.1 MGP_CBAJ_G0022184.1 mouse_genomes_project 16 1719110 1721028 - Rogdi protein_coding retained_intron MGP_CBAJ_T0042641.1 MGP_CBAJ_G0022184.1 mouse_genomes_project 16 1719247 1720944 - Rogdi protein_coding retained_intron MGP_CBAJ_T0042642.1 MGP_CBAJ_G0022184.1 mouse_genomes_project 16 1720059 1722690 - MGP_CBAJ_P0042642 Rogdi protein_coding protein_coding MGP_CBAJ_T0042643.1 MGP_CBAJ_G0022184.1 mouse_genomes_project 16 1720911 1722758 - Rogdi protein_coding retained_intron MGP_CBAJ_T0042644.1 MGP_CBAJ_G0022184.1 mouse_genomes_project 16 1721374 1722741 - Rogdi protein_coding retained_intron MGP_CBAJ_T0012989.1 MGP_CBAJ_G0011101.1 mouse_genomes_project 16 32587911 32588520 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0043331.1 MGP_CBAJ_G0022348.1 mouse_genomes_project 16 18980114 18992913 + MGP_CBAJ_P0043331 Abcf3 protein_coding protein_coding MGP_CBAJ_T0043332.1 MGP_CBAJ_G0022348.1 mouse_genomes_project 16 18981205 18983207 + Abcf3 protein_coding retained_intron MGP_CBAJ_T0043333.1 MGP_CBAJ_G0022348.1 mouse_genomes_project 16 18982114 18990413 + Abcf3 protein_coding retained_intron MGP_CBAJ_T0043334.1 MGP_CBAJ_G0022348.1 mouse_genomes_project 16 18990883 18991804 + Abcf3 protein_coding retained_intron MGP_CBAJ_T0043335.1 MGP_CBAJ_G0022348.1 mouse_genomes_project 16 18991196 18992352 + Abcf3 protein_coding retained_intron MGP_CBAJ_T0006726.1 MGP_CBAJ_G0005541.1 mouse_genomes_project 16 8256804 8259605 - Gm21859 lincRNA lincRNA MGP_CBAJ_T0044846.1 MGP_CBAJ_G0022770.1 mouse_genomes_project 16 102915784 102929741 - MGP_CBAJ_P0044846 Pigp protein_coding protein_coding MGP_CBAJ_T0044847.1 MGP_CBAJ_G0022770.1 mouse_genomes_project 16 102923917 102930450 - MGP_CBAJ_P0044847 Pigp protein_coding protein_coding MGP_CBAJ_T0044848.1 MGP_CBAJ_G0022770.1 mouse_genomes_project 16 102923917 102930771 - MGP_CBAJ_P0044848 Pigp protein_coding protein_coding MGP_CBAJ_T0044849.1 MGP_CBAJ_G0022770.1 mouse_genomes_project 16 102923917 102930468 - MGP_CBAJ_P0044849 Pigp protein_coding protein_coding MGP_CBAJ_T0044850.1 MGP_CBAJ_G0022770.1 mouse_genomes_project 16 102923917 102930771 - MGP_CBAJ_P0044850 Pigp protein_coding protein_coding MGP_CBAJ_T0044851.1 MGP_CBAJ_G0022770.1 mouse_genomes_project 16 102923922 102924972 - Pigp protein_coding processed_transcript MGP_CBAJ_T0044852.1 MGP_CBAJ_G0022770.1 mouse_genomes_project 16 102924162 102929961 - MGP_CBAJ_P0044852 Pigp protein_coding protein_coding MGP_CBAJ_T0043154.1 MGP_CBAJ_G0022304.1 mouse_genomes_project 16 16266255 16297576 + MGP_CBAJ_P0043154 Rtn4r protein_coding protein_coding MGP_CBAJ_T0100192.1 MGP_CBAJ_G0038447.1 mouse_genomes_project 16 5486179 5486261 - Gm23706 snoRNA snoRNA MGP_CBAJ_T0042716.1 MGP_CBAJ_G0022207.1 mouse_genomes_project 16 7603197 7663877 - MGP_CBAJ_P0042716 Tekt5 protein_coding protein_coding MGP_CBAJ_T0042717.1 MGP_CBAJ_G0022207.1 mouse_genomes_project 16 7607626 7663835 - MGP_CBAJ_P0042717 Tekt5 protein_coding protein_coding MGP_CBAJ_T0000928.1 MGP_CBAJ_G0000862.1 mouse_genomes_project 16 83424139 83427245 + TEC TEC MGP_CBAJ_T0000929.1 MGP_CBAJ_G0000862.1 mouse_genomes_project 16 83424956 83425318 + TEC pseudogene MGP_CBAJ_T0013018.1 MGP_CBAJ_G0011130.1 mouse_genomes_project 16 72173545 72174067 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0012965.1 MGP_CBAJ_G0011077.1 mouse_genomes_project 16 14273291 14274265 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0044556.1 MGP_CBAJ_G0022679.1 mouse_genomes_project 16 94939917 94949940 + MGP_CBAJ_P0044556 Usp16 protein_coding protein_coding MGP_CBAJ_T0044557.1 MGP_CBAJ_G0022679.1 mouse_genomes_project 16 94939959 94949457 + Usp16 protein_coding retained_intron MGP_CBAJ_T0044558.1 MGP_CBAJ_G0022679.1 mouse_genomes_project 16 94939975 94958914 + Usp16 protein_coding retained_intron MGP_CBAJ_T0044559.1 MGP_CBAJ_G0022679.1 mouse_genomes_project 16 94939981 94954237 + Usp16 protein_coding processed_transcript MGP_CBAJ_T0044560.1 MGP_CBAJ_G0022679.1 mouse_genomes_project 16 94939990 94971202 + MGP_CBAJ_P0044560 Usp16 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044561.1 MGP_CBAJ_G0022679.1 mouse_genomes_project 16 94940016 94971209 + MGP_CBAJ_P0044561 Usp16 protein_coding protein_coding MGP_CBAJ_T0044562.1 MGP_CBAJ_G0022679.1 mouse_genomes_project 16 94960743 94967805 + Usp16 protein_coding retained_intron MGP_CBAJ_T0044563.1 MGP_CBAJ_G0022679.1 mouse_genomes_project 16 94960978 94967099 + Usp16 protein_coding retained_intron MGP_CBAJ_T0044564.1 MGP_CBAJ_G0022679.1 mouse_genomes_project 16 94969329 94971072 + Usp16 protein_coding retained_intron MGP_CBAJ_T0044565.1 MGP_CBAJ_G0022679.1 mouse_genomes_project 16 94970742 94971190 + Usp16 protein_coding retained_intron MGP_CBAJ_T0017233.1 MGP_CBAJ_G0015055.1 mouse_genomes_project 16 18936932 18943566 - Gm16618 processed_transcript processed_transcript MGP_CBAJ_T0006769.1 MGP_CBAJ_G0005575.1 mouse_genomes_project 16 74860652 74866599 - Gm43265 lincRNA lincRNA MGP_CBAJ_T0010014.1 MGP_CBAJ_G0008152.1 mouse_genomes_project 16 33168196 33168269 + Gm22231 miRNA miRNA MGP_CBAJ_T0043925.1 MGP_CBAJ_G0022495.1 mouse_genomes_project 16 37666029 37669201 + Iqcb1 protein_coding processed_transcript MGP_CBAJ_T0043926.1 MGP_CBAJ_G0022495.1 mouse_genomes_project 16 37666051 37716436 + MGP_CBAJ_P0043926 Iqcb1 protein_coding protein_coding MGP_CBAJ_T0043927.1 MGP_CBAJ_G0022495.1 mouse_genomes_project 16 37666052 37716428 + MGP_CBAJ_P0043927 Iqcb1 protein_coding protein_coding MGP_CBAJ_T0043928.1 MGP_CBAJ_G0022495.1 mouse_genomes_project 16 37689568 37693910 + Iqcb1 protein_coding retained_intron MGP_CBAJ_T0043929.1 MGP_CBAJ_G0022495.1 mouse_genomes_project 16 37689963 37693929 + Iqcb1 protein_coding processed_transcript MGP_CBAJ_T0043930.1 MGP_CBAJ_G0022495.1 mouse_genomes_project 16 37693789 37702139 + Iqcb1 protein_coding processed_transcript MGP_CBAJ_T0043931.1 MGP_CBAJ_G0022495.1 mouse_genomes_project 16 37694145 37699001 + Iqcb1 protein_coding processed_transcript MGP_CBAJ_T0006746.1 MGP_CBAJ_G0005558.1 mouse_genomes_project 16 29682320 29697607 + 4632428C04Rik lincRNA lincRNA MGP_CBAJ_T0044681.1 MGP_CBAJ_G0022733.1 mouse_genomes_project 16 99029993 99065620 - MGP_CBAJ_P0044681 Paxbp1 protein_coding protein_coding MGP_CBAJ_T0044682.1 MGP_CBAJ_G0022733.1 mouse_genomes_project 16 99030908 99065241 - MGP_CBAJ_P0044682 Paxbp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044683.1 MGP_CBAJ_G0022733.1 mouse_genomes_project 16 99032838 99035215 - Paxbp1 protein_coding processed_transcript MGP_CBAJ_T0044684.1 MGP_CBAJ_G0022733.1 mouse_genomes_project 16 99043289 99049430 - Paxbp1 protein_coding retained_intron MGP_CBAJ_T0044685.1 MGP_CBAJ_G0022733.1 mouse_genomes_project 16 99044091 99049117 - MGP_CBAJ_P0044685 Paxbp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044686.1 MGP_CBAJ_G0022733.1 mouse_genomes_project 16 99044210 99046175 - Paxbp1 protein_coding retained_intron MGP_CBAJ_T0044687.1 MGP_CBAJ_G0022733.1 mouse_genomes_project 16 99049051 99053502 - Paxbp1 protein_coding retained_intron MGP_CBAJ_T0044688.1 MGP_CBAJ_G0022733.1 mouse_genomes_project 16 99050183 99065431 - Paxbp1 protein_coding processed_transcript MGP_CBAJ_T0100208.1 MGP_CBAJ_G0038463.1 mouse_genomes_project 16 35821511 35821714 + Gm25079 snoRNA snoRNA MGP_CBAJ_T0098969.1 MGP_CBAJ_G0037224.1 mouse_genomes_project 16 58651265 58651365 - Gm26369 snRNA snRNA MGP_CBAJ_T0003586.1 MGP_CBAJ_G0003248.1 mouse_genomes_project 16 21324573 21330734 + 9230117E06Rik antisense antisense MGP_CBAJ_T0043886.1 MGP_CBAJ_G0022485.1 mouse_genomes_project 16 37029821 37080198 - MGP_CBAJ_P0043886 protein_coding protein_coding MGP_CBAJ_T0006749.1 MGP_CBAJ_G0005561.1 mouse_genomes_project 16 33561682 33562555 - 1700007L15Rik lincRNA lincRNA MGP_CBAJ_T0043732.1 MGP_CBAJ_G0022447.1 mouse_genomes_project 16 32821285 32841575 - MGP_CBAJ_P0043732 Muc20 protein_coding protein_coding MGP_CBAJ_T0043735.1 MGP_CBAJ_G0022447.1 mouse_genomes_project 16 32830164 32841575 - MGP_CBAJ_P0043735 Muc20 protein_coding protein_coding MGP_CBAJ_T0044700.1 MGP_CBAJ_G0022739.1 mouse_genomes_project 16 99441053 99473518 + MGP_CBAJ_P0044700 Gm21970 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044701.1 MGP_CBAJ_G0022739.1 mouse_genomes_project 16 99441053 99473518 + MGP_CBAJ_P0044701 Gm21970 protein_coding protein_coding MGP_CBAJ_T0009997.1 MGP_CBAJ_G0008135.1 mouse_genomes_project 16 15132217 15132314 - Mir301b miRNA miRNA MGP_CBAJ_T0044233.1 MGP_CBAJ_G0022567.1 mouse_genomes_project 16 50231434 50247358 + MGP_CBAJ_P0044233 Dppa2 protein_coding protein_coding MGP_CBAJ_T0097968.1 MGP_CBAJ_G0036241.1 mouse_genomes_project 16 2066014 2066136 - n-R5s30 rRNA rRNA MGP_CBAJ_T0043040.1 MGP_CBAJ_G0022283.1 mouse_genomes_project 16 15547101 15565976 + MGP_CBAJ_P0043040 Aifm3 protein_coding protein_coding MGP_CBAJ_T0043041.1 MGP_CBAJ_G0022283.1 mouse_genomes_project 16 15547153 15565976 + MGP_CBAJ_P0043041 Aifm3 protein_coding protein_coding MGP_CBAJ_T0043042.1 MGP_CBAJ_G0022283.1 mouse_genomes_project 16 15547337 15563897 + Aifm3 protein_coding retained_intron MGP_CBAJ_T0043043.1 MGP_CBAJ_G0022283.1 mouse_genomes_project 16 15558163 15565972 + Aifm3 protein_coding retained_intron MGP_CBAJ_T0043044.1 MGP_CBAJ_G0022283.1 mouse_genomes_project 16 15560732 15562193 + Aifm3 protein_coding retained_intron MGP_CBAJ_T0043045.1 MGP_CBAJ_G0022283.1 mouse_genomes_project 16 15561382 15564415 + Aifm3 protein_coding retained_intron MGP_CBAJ_T0044626.1 MGP_CBAJ_G0022721.1 mouse_genomes_project 16 97269161 97269781 - MGP_CBAJ_P0044626 Krtap7-1 protein_coding protein_coding MGP_CBAJ_T0010015.1 MGP_CBAJ_G0008153.1 mouse_genomes_project 16 33216509 33216594 + Mir1947 miRNA miRNA MGP_CBAJ_T0100191.1 MGP_CBAJ_G0038446.1 mouse_genomes_project 16 5396192 5396336 + Gm24579 snoRNA snoRNA MGP_CBAJ_T0042880.1 MGP_CBAJ_G0022247.1 mouse_genomes_project 16 12115027 12240754 + MGP_CBAJ_P0042880 Abcc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042881.1 MGP_CBAJ_G0022247.1 mouse_genomes_project 16 12115027 12240754 + MGP_CBAJ_P0042881 Abcc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042882.1 MGP_CBAJ_G0022247.1 mouse_genomes_project 16 12115027 12240754 + MGP_CBAJ_P0042882 Abcc1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0042883.1 MGP_CBAJ_G0022247.1 mouse_genomes_project 16 12115029 12242596 + MGP_CBAJ_P0042883 Abcc1 protein_coding protein_coding MGP_CBAJ_T0042884.1 MGP_CBAJ_G0022247.1 mouse_genomes_project 16 12115045 12152385 + MGP_CBAJ_P0042884 Abcc1 protein_coding protein_coding MGP_CBAJ_T0042885.1 MGP_CBAJ_G0022247.1 mouse_genomes_project 16 12115050 12160928 + MGP_CBAJ_P0042885 Abcc1 protein_coding protein_coding MGP_CBAJ_T0042886.1 MGP_CBAJ_G0022247.1 mouse_genomes_project 16 12119187 12147424 + MGP_CBAJ_P0042886 Abcc1 protein_coding protein_coding MGP_CBAJ_T0042887.1 MGP_CBAJ_G0022247.1 mouse_genomes_project 16 12149933 12150308 + Abcc1 protein_coding processed_transcript MGP_CBAJ_T0042888.1 MGP_CBAJ_G0022247.1 mouse_genomes_project 16 12158219 12176568 + Abcc1 protein_coding retained_intron MGP_CBAJ_T0042889.1 MGP_CBAJ_G0022247.1 mouse_genomes_project 16 12225011 12235149 + Abcc1 protein_coding retained_intron MGP_CBAJ_T0042890.1 MGP_CBAJ_G0022247.1 mouse_genomes_project 16 12225016 12240895 + Abcc1 protein_coding retained_intron MGP_CBAJ_T0044883.1 MGP_CBAJ_G0022772.1 mouse_genomes_project 16 103065902 103094697 - MGP_CBAJ_P0044883 Dscr3 protein_coding protein_coding MGP_CBAJ_T0044884.1 MGP_CBAJ_G0022772.1 mouse_genomes_project 16 103070234 103078941 - Dscr3 protein_coding processed_transcript MGP_CBAJ_T0044885.1 MGP_CBAJ_G0022772.1 mouse_genomes_project 16 103072314 103094299 - Dscr3 protein_coding retained_intron MGP_CBAJ_T0044886.1 MGP_CBAJ_G0022772.1 mouse_genomes_project 16 103078213 103094308 - Dscr3 protein_coding retained_intron MGP_CBAJ_T0044887.1 MGP_CBAJ_G0022772.1 mouse_genomes_project 16 103079907 103094284 - Dscr3 protein_coding retained_intron MGP_CBAJ_T0003583.1 MGP_CBAJ_G0003245.1 mouse_genomes_project 16 15163028 15164103 + Gm15648 antisense antisense MGP_CBAJ_T0043046.1 MGP_CBAJ_G0022284.1 mouse_genomes_project 16 15567178 15589863 + MGP_CBAJ_P0043046 Lztr1 protein_coding protein_coding MGP_CBAJ_T0043047.1 MGP_CBAJ_G0022284.1 mouse_genomes_project 16 15567458 15589861 + MGP_CBAJ_P0043047 Lztr1 protein_coding protein_coding MGP_CBAJ_T0043048.1 MGP_CBAJ_G0022284.1 mouse_genomes_project 16 15567463 15585817 + Lztr1 protein_coding retained_intron MGP_CBAJ_T0043049.1 MGP_CBAJ_G0022284.1 mouse_genomes_project 16 15567463 15570716 + Lztr1 protein_coding retained_intron MGP_CBAJ_T0043050.1 MGP_CBAJ_G0022284.1 mouse_genomes_project 16 15567702 15574504 + Lztr1 protein_coding processed_transcript MGP_CBAJ_T0043051.1 MGP_CBAJ_G0022284.1 mouse_genomes_project 16 15569552 15582013 + Lztr1 protein_coding processed_transcript MGP_CBAJ_T0043052.1 MGP_CBAJ_G0022284.1 mouse_genomes_project 16 15574280 15580534 + Lztr1 protein_coding processed_transcript MGP_CBAJ_T0043053.1 MGP_CBAJ_G0022284.1 mouse_genomes_project 16 15579087 15581532 + Lztr1 protein_coding retained_intron MGP_CBAJ_T0043054.1 MGP_CBAJ_G0022284.1 mouse_genomes_project 16 15581921 15589861 + MGP_CBAJ_P0043054 Lztr1 protein_coding protein_coding MGP_CBAJ_T0043055.1 MGP_CBAJ_G0022284.1 mouse_genomes_project 16 15583646 15585221 + Lztr1 protein_coding retained_intron MGP_CBAJ_T0043056.1 MGP_CBAJ_G0022284.1 mouse_genomes_project 16 15585063 15589301 + Lztr1 protein_coding retained_intron MGP_CBAJ_T0010032.1 MGP_CBAJ_G0008170.1 mouse_genomes_project 16 79525199 79525297 + Gm24272 miRNA miRNA MGP_CBAJ_T0043398.1 MGP_CBAJ_G0022356.1 mouse_genomes_project 16 19156603 19169757 - MGP_CBAJ_P0043398 Clcn2 protein_coding protein_coding MGP_CBAJ_T0043399.1 MGP_CBAJ_G0022356.1 mouse_genomes_project 16 19156627 19169754 - Clcn2 protein_coding retained_intron MGP_CBAJ_T0043400.1 MGP_CBAJ_G0022356.1 mouse_genomes_project 16 19156637 19169804 - Clcn2 protein_coding retained_intron MGP_CBAJ_T0043401.1 MGP_CBAJ_G0022356.1 mouse_genomes_project 16 19156862 19169751 - MGP_CBAJ_P0043401 Clcn2 protein_coding protein_coding MGP_CBAJ_T0043402.1 MGP_CBAJ_G0022356.1 mouse_genomes_project 16 19159177 19174531 - MGP_CBAJ_P0043402 Clcn2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043403.1 MGP_CBAJ_G0022356.1 mouse_genomes_project 16 19160813 19162766 - Clcn2 protein_coding retained_intron MGP_CBAJ_T0043404.1 MGP_CBAJ_G0022356.1 mouse_genomes_project 16 19161345 19162374 - Clcn2 protein_coding retained_intron MGP_CBAJ_T0043405.1 MGP_CBAJ_G0022356.1 mouse_genomes_project 16 19163730 19165605 - Clcn2 protein_coding retained_intron MGP_CBAJ_T0043406.1 MGP_CBAJ_G0022356.1 mouse_genomes_project 16 19165950 19167308 - Clcn2 protein_coding retained_intron MGP_CBAJ_T0017246.1 MGP_CBAJ_G0015063.1 mouse_genomes_project 16 62918383 62962466 - Crybg3 processed_transcript processed_transcript MGP_CBAJ_T0003587.1 MGP_CBAJ_G0003249.1 mouse_genomes_project 16 25202035 25205903 + Gm4524 antisense antisense MGP_CBAJ_T0042892.1 MGP_CBAJ_G0022249.1 mouse_genomes_project 16 12344098 12404847 + MGP_CBAJ_P0042892 A630010A05Rik protein_coding protein_coding MGP_CBAJ_T0042893.1 MGP_CBAJ_G0022249.1 mouse_genomes_project 16 12363497 12404869 + MGP_CBAJ_P0042893 A630010A05Rik protein_coding protein_coding MGP_CBAJ_T0042894.1 MGP_CBAJ_G0022249.1 mouse_genomes_project 16 12369225 12404855 + MGP_CBAJ_P0042894 A630010A05Rik protein_coding protein_coding MGP_CBAJ_T0043985.1 MGP_CBAJ_G0022508.1 mouse_genomes_project 16 38882247 38990449 + MGP_CBAJ_P0043985 Gpr156 protein_coding protein_coding MGP_CBAJ_T0044647.1 MGP_CBAJ_G0022727.1 mouse_genomes_project 16 98684349 98692440 - Mis18a protein_coding retained_intron MGP_CBAJ_T0044648.1 MGP_CBAJ_G0022727.1 mouse_genomes_project 16 98684349 98692440 - MGP_CBAJ_P0044648 Mis18a protein_coding protein_coding MGP_CBAJ_T0044649.1 MGP_CBAJ_G0022727.1 mouse_genomes_project 16 98686482 98692175 - Mis18a protein_coding retained_intron MGP_CBAJ_T0006782.1 MGP_CBAJ_G0005583.1 mouse_genomes_project 16 101753357 101798986 - 1700029J03Rik lincRNA lincRNA MGP_CBAJ_T0006783.1 MGP_CBAJ_G0005583.1 mouse_genomes_project 16 101758420 101843594 - 1700029J03Rik lincRNA lincRNA MGP_CBAJ_T0044623.1 MGP_CBAJ_G0022718.1 mouse_genomes_project 16 97144221 97144921 - MGP_CBAJ_P0044623 Krtap21-1 protein_coding protein_coding MGP_CBAJ_T0044219.1 MGP_CBAJ_G0022563.1 mouse_genomes_project 16 48145516 48275115 - MGP_CBAJ_P0044219 Nectin3 protein_coding protein_coding MGP_CBAJ_T0044220.1 MGP_CBAJ_G0022563.1 mouse_genomes_project 16 48152672 48167774 - MGP_CBAJ_P0044220 Nectin3 protein_coding protein_coding MGP_CBAJ_T0044221.1 MGP_CBAJ_G0022563.1 mouse_genomes_project 16 48152719 48167830 - MGP_CBAJ_P0044221 Nectin3 protein_coding protein_coding MGP_CBAJ_T0044222.1 MGP_CBAJ_G0022563.1 mouse_genomes_project 16 48152803 48207627 - MGP_CBAJ_P0044222 Nectin3 protein_coding protein_coding MGP_CBAJ_T0044223.1 MGP_CBAJ_G0022563.1 mouse_genomes_project 16 48153257 48197173 - MGP_CBAJ_P0044223 Nectin3 protein_coding protein_coding MGP_CBAJ_T0044224.1 MGP_CBAJ_G0022563.1 mouse_genomes_project 16 48195097 48275000 - MGP_CBAJ_P0044224 Nectin3 protein_coding protein_coding MGP_CBAJ_T0044225.1 MGP_CBAJ_G0022563.1 mouse_genomes_project 16 48195509 48197746 - Nectin3 protein_coding retained_intron MGP_CBAJ_T0044226.1 MGP_CBAJ_G0022563.1 mouse_genomes_project 16 48206285 48275115 - MGP_CBAJ_P0044226 Nectin3 protein_coding protein_coding MGP_CBAJ_T0044227.1 MGP_CBAJ_G0022563.1 mouse_genomes_project 16 48218109 48274920 - MGP_CBAJ_P0044227 Nectin3 protein_coding protein_coding MGP_CBAJ_T0044228.1 MGP_CBAJ_G0022563.1 mouse_genomes_project 16 48222312 48276685 - Nectin3 protein_coding processed_transcript MGP_CBAJ_T0044133.1 MGP_CBAJ_G0022542.1 mouse_genomes_project 16 46368149 46381131 + MGP_CBAJ_P0044133 Nepro protein_coding protein_coding MGP_CBAJ_T0044134.1 MGP_CBAJ_G0022542.1 mouse_genomes_project 16 46368205 46375211 + MGP_CBAJ_P0044134 Nepro protein_coding nonsense_mediated_decay MGP_CBAJ_T0044135.1 MGP_CBAJ_G0022542.1 mouse_genomes_project 16 46368205 46380420 + MGP_CBAJ_P0044135 Nepro protein_coding nonsense_mediated_decay MGP_CBAJ_T0044136.1 MGP_CBAJ_G0022542.1 mouse_genomes_project 16 46370015 46377976 + Nepro protein_coding retained_intron MGP_CBAJ_T0044137.1 MGP_CBAJ_G0022542.1 mouse_genomes_project 16 46370967 46378573 + MGP_CBAJ_P0044137 Nepro protein_coding nonsense_mediated_decay MGP_CBAJ_T0044510.1 MGP_CBAJ_G0022663.1 mouse_genomes_project 16 84487528 84507153 - MGP_CBAJ_P0044510 protein_coding protein_coding MGP_CBAJ_T0012983.1 MGP_CBAJ_G0011095.1 mouse_genomes_project 16 24959980 24960901 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0043510.1 MGP_CBAJ_G0022386.1 mouse_genomes_project 16 22426714 22506100 - MGP_CBAJ_P0043510 Masp1 protein_coding protein_coding MGP_CBAJ_T0043511.1 MGP_CBAJ_G0022386.1 mouse_genomes_project 16 22454234 22506060 - MGP_CBAJ_P0043511 Masp1 protein_coding unknown_likely_coding MGP_CBAJ_T0043143.1 MGP_CBAJ_G0022303.1 mouse_genomes_project 16 16191098 16221362 - MGP_CBAJ_P0043143 Prodh protein_coding protein_coding MGP_CBAJ_T0043149.1 MGP_CBAJ_G0022303.1 mouse_genomes_project 16 16203531 16221356 - MGP_CBAJ_P0043149 Prodh protein_coding protein_coding MGP_CBAJ_T0043150.1 MGP_CBAJ_G0022303.1 mouse_genomes_project 16 16203935 16211467 - MGP_CBAJ_P0043150 Prodh protein_coding nonsense_mediated_decay MGP_CBAJ_T0043151.1 MGP_CBAJ_G0022303.1 mouse_genomes_project 16 16204065 16212141 - MGP_CBAJ_P0043151 Prodh protein_coding protein_coding MGP_CBAJ_T0043152.1 MGP_CBAJ_G0022303.1 mouse_genomes_project 16 16213210 16214518 - Prodh protein_coding processed_transcript MGP_CBAJ_T0043153.1 MGP_CBAJ_G0022303.1 mouse_genomes_project 16 16216402 16221221 - MGP_CBAJ_P0043153 Prodh protein_coding protein_coding MGP_CBAJ_T0100214.1 MGP_CBAJ_G0038469.1 mouse_genomes_project 16 45421867 45422000 - Gm25989 snoRNA snoRNA MGP_CBAJ_T0100240.1 MGP_CBAJ_G0038495.1 mouse_genomes_project 16 98533594 98533716 + Gm23406 snoRNA snoRNA MGP_CBAJ_T0100219.1 MGP_CBAJ_G0038474.1 mouse_genomes_project 16 57041591 57041723 + Gm25853 snoRNA snoRNA MGP_CBAJ_T0010040.1 MGP_CBAJ_G0008178.1 mouse_genomes_project 16 98966322 98966396 + Gm22933 miRNA miRNA MGP_CBAJ_T0013026.1 MGP_CBAJ_G0011138.1 mouse_genomes_project 16 95048343 95048733 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0043901.1 MGP_CBAJ_G0022492.1 mouse_genomes_project 16 37510536 37550036 + MGP_CBAJ_P0043901 Ildr1 protein_coding protein_coding MGP_CBAJ_T0043902.1 MGP_CBAJ_G0022492.1 mouse_genomes_project 16 37510588 37538916 + Ildr1 protein_coding retained_intron MGP_CBAJ_T0043903.1 MGP_CBAJ_G0022492.1 mouse_genomes_project 16 37510715 37548847 + MGP_CBAJ_P0043903 Ildr1 protein_coding protein_coding MGP_CBAJ_T0043904.1 MGP_CBAJ_G0022492.1 mouse_genomes_project 16 37536320 37545549 + Ildr1 protein_coding retained_intron MGP_CBAJ_T0100215.1 MGP_CBAJ_G0038470.1 mouse_genomes_project 16 47982715 47982847 + Gm26297 snoRNA snoRNA MGP_CBAJ_T0044644.1 MGP_CBAJ_G0022725.1 mouse_genomes_project 16 98101537 98164417 - MGP_CBAJ_P0044644 Scaf4 protein_coding protein_coding MGP_CBAJ_T0044645.1 MGP_CBAJ_G0022725.1 mouse_genomes_project 16 98101736 98164534 - MGP_CBAJ_P0044645 Scaf4 protein_coding protein_coding MGP_CBAJ_T0017269.1 MGP_CBAJ_G0015069.1 mouse_genomes_project 16 99538167 99543137 + A930006K02Rik processed_transcript processed_transcript MGP_CBAJ_T0003624.1 MGP_CBAJ_G0003277.1 mouse_genomes_project 16 104885559 104900581 + Gm15341 antisense antisense MGP_CBAJ_T0000016.1 MGP_CBAJ_G0000011.1 mouse_genomes_project 16 17352301 17352755 - MGP_CBAJ_P0000016 Iglc1 IG_C_gene IG_C_gene MGP_CBAJ_T0012964.1 MGP_CBAJ_G0011076.1 mouse_genomes_project 16 13712076 13712359 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003613.1 MGP_CBAJ_G0003268.1 mouse_genomes_project 16 51856505 51898682 - Gm15518 antisense antisense MGP_CBAJ_T0100223.1 MGP_CBAJ_G0038478.1 mouse_genomes_project 16 61939238 61939365 - Gm26019 snoRNA snoRNA MGP_CBAJ_T0000930.1 MGP_CBAJ_G0000863.1 mouse_genomes_project 16 83437673 83438947 + TEC TEC MGP_CBAJ_T0043509.1 MGP_CBAJ_G0022385.1 mouse_genomes_project 16 22403810 22408638 + MGP_CBAJ_P0043509 Rtp1 protein_coding protein_coding MGP_CBAJ_T0100216.1 MGP_CBAJ_G0038471.1 mouse_genomes_project 16 54488852 54488985 - Gm23513 snoRNA snoRNA MGP_CBAJ_T0043513.1 MGP_CBAJ_G0022388.1 mouse_genomes_project 16 22930525 22931789 - MGP_CBAJ_P0043513 Sst protein_coding protein_coding MGP_CBAJ_T0043269.1 MGP_CBAJ_G0022332.1 mouse_genomes_project 16 17898434 17916408 - MGP_CBAJ_P0043269 protein_coding protein_coding MGP_CBAJ_T0043187.1 MGP_CBAJ_G0022311.1 mouse_genomes_project 16 16544596 16618664 + MGP_CBAJ_P0043187 Arvcf protein_coding protein_coding MGP_CBAJ_T0043188.1 MGP_CBAJ_G0022311.1 mouse_genomes_project 16 16544688 16618660 + MGP_CBAJ_P0043188 Arvcf protein_coding protein_coding MGP_CBAJ_T0043189.1 MGP_CBAJ_G0022311.1 mouse_genomes_project 16 16544688 16618664 + MGP_CBAJ_P0043189 Arvcf protein_coding protein_coding MGP_CBAJ_T0043190.1 MGP_CBAJ_G0022311.1 mouse_genomes_project 16 16585420 16618335 + MGP_CBAJ_P0043190 Arvcf protein_coding protein_coding MGP_CBAJ_T0043191.1 MGP_CBAJ_G0022311.1 mouse_genomes_project 16 16600347 16618664 + MGP_CBAJ_P0043191 Arvcf protein_coding nonsense_mediated_decay MGP_CBAJ_T0043192.1 MGP_CBAJ_G0022311.1 mouse_genomes_project 16 16600348 16617844 + MGP_CBAJ_P0043192 Arvcf protein_coding protein_coding MGP_CBAJ_T0043193.1 MGP_CBAJ_G0022311.1 mouse_genomes_project 16 16608428 16610594 + Arvcf protein_coding processed_transcript MGP_CBAJ_T0043194.1 MGP_CBAJ_G0022311.1 mouse_genomes_project 16 16610677 16612228 + Arvcf protein_coding retained_intron MGP_CBAJ_T0043195.1 MGP_CBAJ_G0022311.1 mouse_genomes_project 16 16612719 16615019 + Arvcf protein_coding processed_transcript MGP_CBAJ_T0043196.1 MGP_CBAJ_G0022311.1 mouse_genomes_project 16 16615036 16616046 + Arvcf protein_coding retained_intron MGP_CBAJ_T0003597.1 MGP_CBAJ_G0003256.1 mouse_genomes_project 16 34256802 34257876 + Gm15829 antisense antisense MGP_CBAJ_T0006771.1 MGP_CBAJ_G0005577.1 mouse_genomes_project 16 82993792 83002620 - lincRNA lincRNA MGP_CBAJ_T0006772.1 MGP_CBAJ_G0005577.1 mouse_genomes_project 16 82998812 83002626 - lincRNA lincRNA MGP_CBAJ_T0012991.1 MGP_CBAJ_G0011103.1 mouse_genomes_project 16 36041757 36041993 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010030.1 MGP_CBAJ_G0008168.1 mouse_genomes_project 16 66699471 66699539 + Gm25986 miRNA miRNA MGP_CBAJ_T0044411.1 MGP_CBAJ_G0022628.1 mouse_genomes_project 16 62638225 62642890 + MGP_CBAJ_P0044411 protein_coding protein_coding MGP_CBAJ_T0012963.1 MGP_CBAJ_G0011075.1 mouse_genomes_project 16 13222065 13223119 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101673.1 MGP_CBAJ_G0039704.1 mouse_genomes_project 16 21872099 21875103 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0043140.1 MGP_CBAJ_G0022302.1 mouse_genomes_project 16 16183603 16203170 + MGP_CBAJ_P0043140 Dgcr6 protein_coding protein_coding MGP_CBAJ_T0043141.1 MGP_CBAJ_G0022302.1 mouse_genomes_project 16 16183619 16187303 + Dgcr6 protein_coding processed_transcript MGP_CBAJ_T0043142.1 MGP_CBAJ_G0022302.1 mouse_genomes_project 16 16183635 16198412 + Dgcr6 protein_coding processed_transcript MGP_CBAJ_T0043144.1 MGP_CBAJ_G0022302.1 mouse_genomes_project 16 16197062 16203152 + MGP_CBAJ_P0043144 Dgcr6 protein_coding protein_coding MGP_CBAJ_T0043145.1 MGP_CBAJ_G0022302.1 mouse_genomes_project 16 16198300 16203447 + MGP_CBAJ_P0043145 Dgcr6 protein_coding protein_coding MGP_CBAJ_T0043146.1 MGP_CBAJ_G0022302.1 mouse_genomes_project 16 16198346 16203168 + MGP_CBAJ_P0043146 Dgcr6 protein_coding protein_coding MGP_CBAJ_T0043147.1 MGP_CBAJ_G0022302.1 mouse_genomes_project 16 16198351 16203442 + MGP_CBAJ_P0043147 Dgcr6 protein_coding protein_coding MGP_CBAJ_T0043148.1 MGP_CBAJ_G0022302.1 mouse_genomes_project 16 16201289 16203153 + Dgcr6 protein_coding processed_transcript MGP_CBAJ_T0012973.1 MGP_CBAJ_G0011085.1 mouse_genomes_project 16 17442260 17476676 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006727.1 MGP_CBAJ_G0005542.1 mouse_genomes_project 16 8369848 8375929 + Gm4262 lincRNA lincRNA MGP_CBAJ_T0044322.1 MGP_CBAJ_G0022591.1 mouse_genomes_project 16 59143965 59213075 + MGP_CBAJ_P0044322 Impg2 protein_coding protein_coding MGP_CBAJ_T0044323.1 MGP_CBAJ_G0022591.1 mouse_genomes_project 16 59143984 59150900 + Impg2 protein_coding processed_transcript MGP_CBAJ_T0044324.1 MGP_CBAJ_G0022591.1 mouse_genomes_project 16 59143990 59215692 + MGP_CBAJ_P0044324 Impg2 protein_coding protein_coding MGP_CBAJ_T0044325.1 MGP_CBAJ_G0022591.1 mouse_genomes_project 16 59212099 59212955 + Impg2 protein_coding processed_transcript MGP_CBAJ_T0101678.1 MGP_CBAJ_G0039709.1 mouse_genomes_project 16 62264849 62265775 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0043884.1 MGP_CBAJ_G0022483.1 mouse_genomes_project 16 36858336 36879148 + MGP_CBAJ_P0043884 Gm5416 protein_coding protein_coding MGP_CBAJ_T0044355.1 MGP_CBAJ_G0022604.1 mouse_genomes_project 16 61556861 61617115 + MGP_CBAJ_P0044355 Dcbld2 protein_coding protein_coding MGP_CBAJ_T0044356.1 MGP_CBAJ_G0022604.1 mouse_genomes_project 16 61602622 61612767 + Dcbld2 protein_coding processed_transcript MGP_CBAJ_T0044357.1 MGP_CBAJ_G0022604.1 mouse_genomes_project 16 61603277 61603996 + Dcbld2 protein_coding processed_transcript MGP_CBAJ_T0044358.1 MGP_CBAJ_G0022604.1 mouse_genomes_project 16 61603826 61611202 + Dcbld2 protein_coding retained_intron MGP_CBAJ_T0044359.1 MGP_CBAJ_G0022604.1 mouse_genomes_project 16 61607652 61613216 + Dcbld2 protein_coding processed_transcript MGP_CBAJ_T0044360.1 MGP_CBAJ_G0022604.1 mouse_genomes_project 16 61607696 61614112 + Dcbld2 protein_coding retained_intron MGP_CBAJ_T0044361.1 MGP_CBAJ_G0022604.1 mouse_genomes_project 16 61607698 61614175 + Dcbld2 protein_coding retained_intron MGP_CBAJ_T0044491.1 MGP_CBAJ_G0022656.1 mouse_genomes_project 16 81552970 81564602 - MGP_CBAJ_P0044491 Hspa13 protein_coding protein_coding MGP_CBAJ_T0044492.1 MGP_CBAJ_G0022656.1 mouse_genomes_project 16 81554420 81564572 - MGP_CBAJ_P0044492 Hspa13 protein_coding protein_coding MGP_CBAJ_T0044493.1 MGP_CBAJ_G0022656.1 mouse_genomes_project 16 81556968 81564563 - Hspa13 protein_coding retained_intron MGP_CBAJ_T0017248.1 MGP_CBAJ_G0015065.1 mouse_genomes_project 16 83239401 83640125 + processed_transcript lincRNA MGP_CBAJ_T0017249.1 MGP_CBAJ_G0015065.1 mouse_genomes_project 16 83239401 83383615 + processed_transcript lincRNA MGP_CBAJ_T0017250.1 MGP_CBAJ_G0015065.1 mouse_genomes_project 16 83239403 83638656 + processed_transcript lincRNA MGP_CBAJ_T0017251.1 MGP_CBAJ_G0015065.1 mouse_genomes_project 16 83343603 83736049 + processed_transcript lincRNA MGP_CBAJ_T0017252.1 MGP_CBAJ_G0015065.1 mouse_genomes_project 16 83343611 83380751 + processed_transcript lincRNA MGP_CBAJ_T0017253.1 MGP_CBAJ_G0015065.1 mouse_genomes_project 16 83343628 83636626 + processed_transcript lincRNA MGP_CBAJ_T0017254.1 MGP_CBAJ_G0015065.1 mouse_genomes_project 16 83343682 83640146 + processed_transcript lincRNA MGP_CBAJ_T0017255.1 MGP_CBAJ_G0015065.1 mouse_genomes_project 16 83343751 83596827 + processed_transcript lincRNA MGP_CBAJ_T0017256.1 MGP_CBAJ_G0015065.1 mouse_genomes_project 16 83343927 83746588 + processed_transcript lincRNA MGP_CBAJ_T0017257.1 MGP_CBAJ_G0015065.1 mouse_genomes_project 16 83485270 83487755 + processed_transcript TEC MGP_CBAJ_T0017258.1 MGP_CBAJ_G0015065.1 mouse_genomes_project 16 83530167 83640237 + processed_transcript lincRNA MGP_CBAJ_T0017259.1 MGP_CBAJ_G0015065.1 mouse_genomes_project 16 83530331 83746592 + processed_transcript lincRNA MGP_CBAJ_T0017260.1 MGP_CBAJ_G0015065.1 mouse_genomes_project 16 83635529 83637776 + processed_transcript TEC MGP_CBAJ_T0017261.1 MGP_CBAJ_G0015065.1 mouse_genomes_project 16 83636067 83636669 + processed_transcript lincRNA MGP_CBAJ_T0017262.1 MGP_CBAJ_G0015065.1 mouse_genomes_project 16 83725758 83746586 + processed_transcript lincRNA MGP_CBAJ_T0017263.1 MGP_CBAJ_G0015065.1 mouse_genomes_project 16 83735760 83746586 + processed_transcript lincRNA MGP_CBAJ_T0042915.1 MGP_CBAJ_G0022259.1 mouse_genomes_project 16 14219054 14267340 - MGP_CBAJ_P0042915 Dnm1l protein_coding protein_coding MGP_CBAJ_T0042916.1 MGP_CBAJ_G0022259.1 mouse_genomes_project 16 14219054 14267340 - MGP_CBAJ_P0042916 Dnm1l protein_coding protein_coding MGP_CBAJ_T0042917.1 MGP_CBAJ_G0022259.1 mouse_genomes_project 16 14219054 14267340 - MGP_CBAJ_P0042917 Dnm1l protein_coding protein_coding MGP_CBAJ_T0044326.1 MGP_CBAJ_G0022592.1 mouse_genomes_project 16 59459044 59699158 + MGP_CBAJ_P0044326 Abi3bp protein_coding protein_coding MGP_CBAJ_T0044327.1 MGP_CBAJ_G0022592.1 mouse_genomes_project 16 59459044 59699158 + MGP_CBAJ_P0044327 Abi3bp protein_coding protein_coding MGP_CBAJ_T0044328.1 MGP_CBAJ_G0022592.1 mouse_genomes_project 16 59459044 59699158 + MGP_CBAJ_P0044328 Abi3bp protein_coding protein_coding MGP_CBAJ_T0044329.1 MGP_CBAJ_G0022592.1 mouse_genomes_project 16 59459044 59699158 + MGP_CBAJ_P0044329 Abi3bp protein_coding protein_coding MGP_CBAJ_T0044330.1 MGP_CBAJ_G0022592.1 mouse_genomes_project 16 59459112 59699168 + MGP_CBAJ_P0044330 Abi3bp protein_coding unknown_likely_coding MGP_CBAJ_T0017239.1 MGP_CBAJ_G0015059.1 mouse_genomes_project 16 33069931 33219713 - Gm17106 processed_transcript processed_transcript MGP_CBAJ_T0044070.1 MGP_CBAJ_G0022529.1 mouse_genomes_project 16 45175683 45195421 - MGP_CBAJ_P0044070 Tigit protein_coding protein_coding MGP_CBAJ_T0044237.1 MGP_CBAJ_G0022571.1 mouse_genomes_project 16 50837672 50839583 + MGP_CBAJ_P0044237 Retnla protein_coding protein_coding MGP_CBAJ_T0006764.1 MGP_CBAJ_G0005572.1 mouse_genomes_project 16 53030572 53032376 + lincRNA lincRNA MGP_CBAJ_T0006765.1 MGP_CBAJ_G0005572.1 mouse_genomes_project 16 53030641 53032350 + lincRNA lincRNA MGP_CBAJ_T0012966.1 MGP_CBAJ_G0011078.1 mouse_genomes_project 16 14813596 14813846 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0042754.1 MGP_CBAJ_G0022220.1 mouse_genomes_project 16 8310735 8352216 - MGP_CBAJ_P0042754 Litaf protein_coding protein_coding MGP_CBAJ_T0042755.1 MGP_CBAJ_G0022220.1 mouse_genomes_project 16 8312286 8332174 - MGP_CBAJ_P0042755 Litaf protein_coding protein_coding MGP_CBAJ_T0042756.1 MGP_CBAJ_G0022220.1 mouse_genomes_project 16 8314800 8432584 - MGP_CBAJ_P0042756 Litaf protein_coding protein_coding MGP_CBAJ_T0042757.1 MGP_CBAJ_G0022220.1 mouse_genomes_project 16 8320872 8352166 - Litaf protein_coding retained_intron MGP_CBAJ_T0097976.1 MGP_CBAJ_G0036249.1 mouse_genomes_project 16 50359220 50359339 - n-R5s36 rRNA rRNA MGP_CBAJ_T0043109.1 MGP_CBAJ_G0022291.1 mouse_genomes_project 16 15724078 15799461 - MGP_CBAJ_P0043109 Med15 protein_coding protein_coding MGP_CBAJ_T0043110.1 MGP_CBAJ_G0022291.1 mouse_genomes_project 16 15724078 15799461 - MGP_CBAJ_P0043110 Med15 protein_coding protein_coding MGP_CBAJ_T0010035.1 MGP_CBAJ_G0008173.1 mouse_genomes_project 16 83640645 83640710 + Mir99a miRNA miRNA MGP_CBAJ_T0012995.1 MGP_CBAJ_G0011107.1 mouse_genomes_project 16 39515543 39516720 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098962.1 MGP_CBAJ_G0037217.1 mouse_genomes_project 16 41540904 41540998 + Gm22543 snRNA snRNA MGP_CBAJ_T0006751.1 MGP_CBAJ_G0005563.1 mouse_genomes_project 16 36287920 36290909 - Gm26838 lincRNA lincRNA MGP_CBAJ_T0044952.1 MGP_CBAJ_G0022782.1 mouse_genomes_project 16 104954612 104995589 - MGP_CBAJ_P0044952 Lca5l protein_coding protein_coding MGP_CBAJ_T0044953.1 MGP_CBAJ_G0022782.1 mouse_genomes_project 16 104955115 104979350 - MGP_CBAJ_P0044953 Lca5l protein_coding unknown_likely_coding MGP_CBAJ_T0044954.1 MGP_CBAJ_G0022782.1 mouse_genomes_project 16 104955277 104995596 - MGP_CBAJ_P0044954 Lca5l protein_coding protein_coding MGP_CBAJ_T0044955.1 MGP_CBAJ_G0022782.1 mouse_genomes_project 16 104956696 104995589 - Lca5l protein_coding retained_intron MGP_CBAJ_T0044956.1 MGP_CBAJ_G0022782.1 mouse_genomes_project 16 104983594 104995596 - Lca5l protein_coding processed_transcript MGP_CBAJ_T0010046.1 MGP_CBAJ_G0008184.1 mouse_genomes_project 16 104823702 104823826 - Gm27833 miRNA miRNA MGP_CBAJ_T0043010.1 MGP_CBAJ_G0022277.1 mouse_genomes_project 16 15277307 15309276 + MGP_CBAJ_P0043010 Hic2 protein_coding protein_coding MGP_CBAJ_T0043011.1 MGP_CBAJ_G0022277.1 mouse_genomes_project 16 15277399 15307441 + MGP_CBAJ_P0043011 Hic2 protein_coding protein_coding MGP_CBAJ_T0100217.1 MGP_CBAJ_G0038472.1 mouse_genomes_project 16 55447762 55447888 - Gm25723 snoRNA snoRNA MGP_CBAJ_T0100236.1 MGP_CBAJ_G0038491.1 mouse_genomes_project 16 94258833 94258958 + Gm25715 snoRNA snoRNA MGP_CBAJ_T0012948.1 MGP_CBAJ_G0011060.1 mouse_genomes_project 16 932517 932842 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0042665.1 MGP_CBAJ_G0022193.1 mouse_genomes_project 16 3706258 4358682 + MGP_CBAJ_P0042665 Rbfox1 protein_coding protein_coding MGP_CBAJ_T0042666.1 MGP_CBAJ_G0022193.1 mouse_genomes_project 16 3984512 4362221 + MGP_CBAJ_P0042666 Rbfox1 protein_coding protein_coding MGP_CBAJ_T0042667.1 MGP_CBAJ_G0022193.1 mouse_genomes_project 16 4153682 4362225 + MGP_CBAJ_P0042667 Rbfox1 protein_coding unknown_likely_coding MGP_CBAJ_T0042864.1 MGP_CBAJ_G0022241.1 mouse_genomes_project 16 11694227 11702012 - MGP_CBAJ_P0042864 Ifitm7 protein_coding protein_coding MGP_CBAJ_T0042865.1 MGP_CBAJ_G0022241.1 mouse_genomes_project 16 11695324 11697131 - MGP_CBAJ_P0042865 Ifitm7 protein_coding protein_coding MGP_CBAJ_T0012994.1 MGP_CBAJ_G0011106.1 mouse_genomes_project 16 38084640 38085487 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0043170.1 MGP_CBAJ_G0022309.1 mouse_genomes_project 16 16417315 16470464 - MGP_CBAJ_P0043170 Dgcr8 protein_coding protein_coding MGP_CBAJ_T0043171.1 MGP_CBAJ_G0022309.1 mouse_genomes_project 16 16417324 16470467 - MGP_CBAJ_P0043171 Dgcr8 protein_coding protein_coding MGP_CBAJ_T0043172.1 MGP_CBAJ_G0022309.1 mouse_genomes_project 16 16418308 16440577 - Dgcr8 protein_coding processed_transcript MGP_CBAJ_T0043173.1 MGP_CBAJ_G0022309.1 mouse_genomes_project 16 16418809 16420494 - Dgcr8 protein_coding processed_transcript MGP_CBAJ_T0043174.1 MGP_CBAJ_G0022309.1 mouse_genomes_project 16 16446537 16465790 - Dgcr8 protein_coding retained_intron MGP_CBAJ_T0043175.1 MGP_CBAJ_G0022309.1 mouse_genomes_project 16 16446720 16461473 - Dgcr8 protein_coding retained_intron MGP_CBAJ_T0043176.1 MGP_CBAJ_G0022309.1 mouse_genomes_project 16 16468800 16470388 - Dgcr8 protein_coding processed_transcript MGP_CBAJ_T0044944.1 MGP_CBAJ_G0022780.1 mouse_genomes_project 16 104908268 104916757 - MGP_CBAJ_P0044944 Hmgn1 protein_coding unknown_likely_coding MGP_CBAJ_T0044945.1 MGP_CBAJ_G0022780.1 mouse_genomes_project 16 104909221 104914488 - Hmgn1 protein_coding retained_intron MGP_CBAJ_T0044946.1 MGP_CBAJ_G0022780.1 mouse_genomes_project 16 104909294 104916757 - MGP_CBAJ_P0044946 Hmgn1 protein_coding protein_coding MGP_CBAJ_T0044947.1 MGP_CBAJ_G0022780.1 mouse_genomes_project 16 104915757 104916619 - Hmgn1 protein_coding retained_intron MGP_CBAJ_T0043414.1 MGP_CBAJ_G0022360.1 mouse_genomes_project 16 19425120 19429353 + MGP_CBAJ_P0043414 Teddm3 protein_coding protein_coding MGP_CBAJ_T0042898.1 MGP_CBAJ_G0022253.1 mouse_genomes_project 16 13440710 13457715 - MGP_CBAJ_P0042898 Mcm4 protein_coding protein_coding MGP_CBAJ_T0043270.1 MGP_CBAJ_G0022333.1 mouse_genomes_project 16 17898434 17902481 - MGP_CBAJ_P0043270 protein_coding protein_coding MGP_CBAJ_T0043358.1 MGP_CBAJ_G0022352.1 mouse_genomes_project 16 19060352 19062425 - MGP_CBAJ_P0043358 Camk2n2 protein_coding protein_coding MGP_CBAJ_T0043057.1 MGP_CBAJ_G0022285.1 mouse_genomes_project 16 15591511 15594666 - MGP_CBAJ_P0043057 Thap7 protein_coding protein_coding MGP_CBAJ_T0043058.1 MGP_CBAJ_G0022285.1 mouse_genomes_project 16 15591715 15594642 - Thap7 protein_coding retained_intron MGP_CBAJ_T0043059.1 MGP_CBAJ_G0022285.1 mouse_genomes_project 16 15591779 15594582 - Thap7 protein_coding retained_intron MGP_CBAJ_T0043060.1 MGP_CBAJ_G0022285.1 mouse_genomes_project 16 15591873 15594211 - Thap7 protein_coding retained_intron MGP_CBAJ_T0043061.1 MGP_CBAJ_G0022285.1 mouse_genomes_project 16 15592030 15592678 - Thap7 protein_coding retained_intron MGP_CBAJ_T0043062.1 MGP_CBAJ_G0022285.1 mouse_genomes_project 16 15592111 15594585 - MGP_CBAJ_P0043062 Thap7 protein_coding protein_coding MGP_CBAJ_T0043063.1 MGP_CBAJ_G0022285.1 mouse_genomes_project 16 15592532 15594186 - Thap7 protein_coding retained_intron MGP_CBAJ_T0000040.1 MGP_CBAJ_G0000032.1 mouse_genomes_project 16 17514172 17514214 - MGP_CBAJ_P0000040 Iglj4 IG_J_gene IG_J_gene MGP_CBAJ_T0042999.1 MGP_CBAJ_G0022274.1 mouse_genomes_project 16 15154864 15161684 + MGP_CBAJ_P0042999 Ydjc protein_coding protein_coding MGP_CBAJ_T0043000.1 MGP_CBAJ_G0022274.1 mouse_genomes_project 16 15156086 15159090 + Ydjc protein_coding retained_intron MGP_CBAJ_T0043001.1 MGP_CBAJ_G0022274.1 mouse_genomes_project 16 15157180 15171390 + MGP_CBAJ_P0043001 Ydjc protein_coding protein_coding MGP_CBAJ_T0043002.1 MGP_CBAJ_G0022274.1 mouse_genomes_project 16 15157192 15162100 + Ydjc protein_coding retained_intron MGP_CBAJ_T0043003.1 MGP_CBAJ_G0022274.1 mouse_genomes_project 16 15157219 15159090 + Ydjc protein_coding retained_intron MGP_CBAJ_T0043004.1 MGP_CBAJ_G0022274.1 mouse_genomes_project 16 15157222 15159090 + MGP_CBAJ_P0043004 Ydjc protein_coding protein_coding MGP_CBAJ_T0003604.1 MGP_CBAJ_G0003261.1 mouse_genomes_project 16 39319574 39321988 + Maats1os antisense antisense MGP_CBAJ_T0011289.1 MGP_CBAJ_G0009427.1 mouse_genomes_project 16 73787572 73787858 + Gm23591 misc_RNA misc_RNA MGP_CBAJ_T0043409.1 MGP_CBAJ_G0022358.1 mouse_genomes_project 16 19183257 19188574 - MGP_CBAJ_P0043409 Thpo protein_coding protein_coding MGP_CBAJ_T0042963.1 MGP_CBAJ_G0022267.1 mouse_genomes_project 16 14877986 14908899 + MGP_CBAJ_P0042963 Ppm1f protein_coding protein_coding MGP_CBAJ_T0042964.1 MGP_CBAJ_G0022267.1 mouse_genomes_project 16 14878091 14896724 + Ppm1f protein_coding processed_transcript MGP_CBAJ_T0098941.1 MGP_CBAJ_G0037196.1 mouse_genomes_project 16 15540575 15540642 - Gm22770 snRNA snRNA MGP_CBAJ_T0043658.1 MGP_CBAJ_G0022428.1 mouse_genomes_project 16 31869800 31922912 - MGP_CBAJ_P0043658 Senp5 protein_coding protein_coding MGP_CBAJ_T0043659.1 MGP_CBAJ_G0022428.1 mouse_genomes_project 16 31870812 31899604 - MGP_CBAJ_P0043659 Senp5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043660.1 MGP_CBAJ_G0022428.1 mouse_genomes_project 16 31885725 31900780 - MGP_CBAJ_P0043660 Senp5 protein_coding protein_coding MGP_CBAJ_T0043661.1 MGP_CBAJ_G0022428.1 mouse_genomes_project 16 31886861 31922803 - Senp5 protein_coding retained_intron MGP_CBAJ_T0042866.1 MGP_CBAJ_G0022242.1 mouse_genomes_project 16 11701947 11845777 + MGP_CBAJ_P0042866 2900011O08Rik protein_coding protein_coding MGP_CBAJ_T0006753.1 MGP_CBAJ_G0005565.1 mouse_genomes_project 16 44856757 44874529 - Gm9968 lincRNA lincRNA MGP_CBAJ_T0044230.1 MGP_CBAJ_G0022565.1 mouse_genomes_project 16 49980091 49980714 + MGP_CBAJ_P0044230 protein_coding protein_coding MGP_CBAJ_T0043076.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15691767 15717686 + MGP_CBAJ_P0043076 Smpd4 protein_coding protein_coding MGP_CBAJ_T0043077.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15691770 15711906 + Smpd4 protein_coding processed_transcript MGP_CBAJ_T0043078.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15691770 15717685 + MGP_CBAJ_P0043078 Smpd4 protein_coding protein_coding MGP_CBAJ_T0043079.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15691770 15699070 + MGP_CBAJ_P0043079 Smpd4 protein_coding protein_coding MGP_CBAJ_T0043080.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15691773 15699272 + MGP_CBAJ_P0043080 Smpd4 protein_coding protein_coding MGP_CBAJ_T0043081.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15691773 15716205 + MGP_CBAJ_P0043081 Smpd4 protein_coding protein_coding MGP_CBAJ_T0043082.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15691776 15696908 + Smpd4 protein_coding retained_intron MGP_CBAJ_T0043083.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15691776 15717685 + Smpd4 protein_coding retained_intron MGP_CBAJ_T0043084.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15691776 15694409 + Smpd4 protein_coding retained_intron MGP_CBAJ_T0043085.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15691776 15698464 + MGP_CBAJ_P0043085 Smpd4 protein_coding protein_coding MGP_CBAJ_T0043086.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15691776 15717685 + MGP_CBAJ_P0043086 Smpd4 protein_coding protein_coding MGP_CBAJ_T0043087.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15691787 15711156 + MGP_CBAJ_P0043087 Smpd4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043088.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15691790 15699309 + MGP_CBAJ_P0043088 Smpd4 protein_coding protein_coding MGP_CBAJ_T0043089.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15691794 15715006 + Smpd4 protein_coding retained_intron MGP_CBAJ_T0043090.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15691802 15698628 + MGP_CBAJ_P0043090 Smpd4 protein_coding protein_coding MGP_CBAJ_T0043091.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15691930 15696570 + MGP_CBAJ_P0043091 Smpd4 protein_coding protein_coding MGP_CBAJ_T0043092.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15693900 15715661 + MGP_CBAJ_P0043092 Smpd4 protein_coding protein_coding MGP_CBAJ_T0043093.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15693900 15715661 + MGP_CBAJ_P0043093 Smpd4 protein_coding protein_coding MGP_CBAJ_T0043094.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15693900 15715661 + MGP_CBAJ_P0043094 Smpd4 protein_coding protein_coding MGP_CBAJ_T0043095.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15693900 15715661 + MGP_CBAJ_P0043095 Smpd4 protein_coding protein_coding MGP_CBAJ_T0043096.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15693900 15715661 + MGP_CBAJ_P0043096 Smpd4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043097.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15710952 15713693 + Smpd4 protein_coding retained_intron MGP_CBAJ_T0043098.1 MGP_CBAJ_G0022289.1 mouse_genomes_project 16 15711217 15713597 + Smpd4 protein_coding retained_intron MGP_CBAJ_T0042818.1 MGP_CBAJ_G0022232.1 mouse_genomes_project 16 10843047 11010893 + MGP_CBAJ_P0042818 Mkl2 protein_coding protein_coding MGP_CBAJ_T0042819.1 MGP_CBAJ_G0022232.1 mouse_genomes_project 16 10843072 10928543 + MGP_CBAJ_P0042819 Mkl2 protein_coding protein_coding MGP_CBAJ_T0042820.1 MGP_CBAJ_G0022232.1 mouse_genomes_project 16 10853830 10928540 + MGP_CBAJ_P0042820 Mkl2 protein_coding protein_coding MGP_CBAJ_T0042821.1 MGP_CBAJ_G0022232.1 mouse_genomes_project 16 10954266 11013153 + MGP_CBAJ_P0042821 Mkl2 protein_coding protein_coding MGP_CBAJ_T0012961.1 MGP_CBAJ_G0011073.1 mouse_genomes_project 16 11794514 11795118 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0000916.1 MGP_CBAJ_G0000850.1 mouse_genomes_project 16 762623 767456 - TEC TEC MGP_CBAJ_T0012978.1 MGP_CBAJ_G0011090.1 mouse_genomes_project 16 20769226 20769650 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0012990.1 MGP_CBAJ_G0011102.1 mouse_genomes_project 16 32751109 32752049 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0042625.1 MGP_CBAJ_G0022181.1 mouse_genomes_project 16 1663685 1684229 + MGP_CBAJ_P0042625 4930451G09Rik protein_coding protein_coding MGP_CBAJ_T0042752.1 MGP_CBAJ_G0022219.1 mouse_genomes_project 16 8161155 8176286 + MGP_CBAJ_P0042752 Rmi2 protein_coding protein_coding MGP_CBAJ_T0042753.1 MGP_CBAJ_G0022219.1 mouse_genomes_project 16 8161164 8237062 + MGP_CBAJ_P0042753 Rmi2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0100213.1 MGP_CBAJ_G0038468.1 mouse_genomes_project 16 45369909 45370038 - Gm26074 snoRNA snoRNA MGP_CBAJ_T0043468.1 MGP_CBAJ_G0022377.1 mouse_genomes_project 16 21733560 21784384 + MGP_CBAJ_P0043468 Fetub protein_coding unknown_likely_coding MGP_CBAJ_T0043469.1 MGP_CBAJ_G0022377.1 mouse_genomes_project 16 21761667 21784390 + MGP_CBAJ_P0043469 Fetub protein_coding protein_coding MGP_CBAJ_T0043470.1 MGP_CBAJ_G0022377.1 mouse_genomes_project 16 21763508 21784390 + MGP_CBAJ_P0043470 Fetub protein_coding protein_coding MGP_CBAJ_T0043471.1 MGP_CBAJ_G0022377.1 mouse_genomes_project 16 21763508 21784390 + MGP_CBAJ_P0043471 Fetub protein_coding protein_coding MGP_CBAJ_T0043472.1 MGP_CBAJ_G0022377.1 mouse_genomes_project 16 21765031 21784381 + MGP_CBAJ_P0043472 Fetub protein_coding protein_coding MGP_CBAJ_T0011286.1 MGP_CBAJ_G0009424.1 mouse_genomes_project 16 49492900 49493214 - Gm25318 misc_RNA misc_RNA MGP_CBAJ_T0006770.1 MGP_CBAJ_G0005576.1 mouse_genomes_project 16 81847759 81856771 + Gm15555 lincRNA lincRNA MGP_CBAJ_T0043272.1 MGP_CBAJ_G0022335.1 mouse_genomes_project 16 18013781 18063386 - MGP_CBAJ_P0043272 Lamp3 protein_coding protein_coding MGP_CBAJ_T0000931.1 MGP_CBAJ_G0000864.1 mouse_genomes_project 16 83440642 83444031 + TEC TEC MGP_CBAJ_T0043433.1 MGP_CBAJ_G0022364.1 mouse_genomes_project 16 20428445 20460942 - MGP_CBAJ_P0043433 Ehhadh protein_coding protein_coding MGP_CBAJ_T0042681.1 MGP_CBAJ_G0022197.1 mouse_genomes_project 16 5658155 5661985 - MGP_CBAJ_P0042681 Tmem186 protein_coding protein_coding MGP_CBAJ_T0006729.1 MGP_CBAJ_G0005544.1 mouse_genomes_project 16 8577678 8602267 + 2610020C07Rik lincRNA lincRNA MGP_CBAJ_T0044711.1 MGP_CBAJ_G0022742.1 mouse_genomes_project 16 99634446 99658217 + MGP_CBAJ_P0044711 Ifngr2 protein_coding protein_coding MGP_CBAJ_T0044712.1 MGP_CBAJ_G0022742.1 mouse_genomes_project 16 99634540 99653695 + MGP_CBAJ_P0044712 Ifngr2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0044713.1 MGP_CBAJ_G0022742.1 mouse_genomes_project 16 99654378 99658217 + Ifngr2 protein_coding processed_transcript MGP_CBAJ_T0044646.1 MGP_CBAJ_G0022726.1 mouse_genomes_project 16 98283116 98421259 + MGP_CBAJ_P0044646 Hunk protein_coding protein_coding MGP_CBAJ_T0006725.1 MGP_CBAJ_G0005540.1 mouse_genomes_project 16 8154060 8159633 + Gm26822 lincRNA lincRNA MGP_CBAJ_T0044142.1 MGP_CBAJ_G0022544.1 mouse_genomes_project 16 46409605 46450085 + MGP_CBAJ_P0044142 Cd200r1 protein_coding protein_coding MGP_CBAJ_T0044231.1 MGP_CBAJ_G0022566.1 mouse_genomes_project 16 50197736 50213520 + MGP_CBAJ_P0044231 protein_coding protein_coding MGP_CBAJ_T0044232.1 MGP_CBAJ_G0022566.1 mouse_genomes_project 16 50197736 50213520 + MGP_CBAJ_P0044232 protein_coding protein_coding MGP_CBAJ_T0010017.1 MGP_CBAJ_G0008155.1 mouse_genomes_project 16 41606174 41606276 - Gm27887 miRNA miRNA MGP_CBAJ_T0101669.1 MGP_CBAJ_G0039700.1 mouse_genomes_project 16 100487 101421 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0100190.1 MGP_CBAJ_G0038445.1 mouse_genomes_project 16 13324 13451 - Gm22598 snoRNA snoRNA MGP_CBAJ_T0042552.1 MGP_CBAJ_G0022164.1 mouse_genomes_project 16 663073 810744 - MGP_CBAJ_P0042552 Crebbp protein_coding protein_coding MGP_CBAJ_T0042553.1 MGP_CBAJ_G0022164.1 mouse_genomes_project 16 665446 810344 - MGP_CBAJ_P0042553 Crebbp protein_coding protein_coding MGP_CBAJ_T0042554.1 MGP_CBAJ_G0022164.1 mouse_genomes_project 16 668355 671458 - Crebbp protein_coding retained_intron MGP_CBAJ_T0042555.1 MGP_CBAJ_G0022164.1 mouse_genomes_project 16 669515 670310 - Crebbp protein_coding retained_intron MGP_CBAJ_T0042556.1 MGP_CBAJ_G0022164.1 mouse_genomes_project 16 670094 676315 - MGP_CBAJ_P0042556 Crebbp protein_coding protein_coding MGP_CBAJ_T0042557.1 MGP_CBAJ_G0022164.1 mouse_genomes_project 16 673553 718052 - MGP_CBAJ_P0042557 Crebbp protein_coding protein_coding MGP_CBAJ_T0042558.1 MGP_CBAJ_G0022164.1 mouse_genomes_project 16 673904 677797 - MGP_CBAJ_P0042558 Crebbp protein_coding protein_coding MGP_CBAJ_T0042559.1 MGP_CBAJ_G0022164.1 mouse_genomes_project 16 706176 716033 - MGP_CBAJ_P0042559 Crebbp protein_coding protein_coding MGP_CBAJ_T0012980.1 MGP_CBAJ_G0011092.1 mouse_genomes_project 16 22110168 22110622 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0042929.1 MGP_CBAJ_G0022261.1 mouse_genomes_project 16 14608525 14609667 - MGP_CBAJ_P0042929 Olfr19 protein_coding protein_coding MGP_CBAJ_T0042930.1 MGP_CBAJ_G0022261.1 mouse_genomes_project 16 14608984 14612055 - MGP_CBAJ_P0042930 Olfr19 protein_coding protein_coding MGP_CBAJ_T0012974.1 MGP_CBAJ_G0011086.1 mouse_genomes_project 16 18013944 18014451 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0044523.1 MGP_CBAJ_G0022669.1 mouse_genomes_project 16 91885044 91940473 + MGP_CBAJ_P0044523 Jam2 protein_coding protein_coding MGP_CBAJ_T0044524.1 MGP_CBAJ_G0022669.1 mouse_genomes_project 16 91885307 91925588 + MGP_CBAJ_P0044524 Jam2 protein_coding protein_coding MGP_CBAJ_T0044525.1 MGP_CBAJ_G0022669.1 mouse_genomes_project 16 91923995 91937427 + Jam2 protein_coding processed_transcript MGP_CBAJ_T0003576.1 MGP_CBAJ_G0003239.1 mouse_genomes_project 16 9134699 9138388 - Gm4279 antisense antisense MGP_CBAJ_T0043838.1 MGP_CBAJ_G0022469.1 mouse_genomes_project 16 35749459 35801547 - MGP_CBAJ_P0043838 Sec22a protein_coding protein_coding MGP_CBAJ_T0043839.1 MGP_CBAJ_G0022469.1 mouse_genomes_project 16 35752398 35785370 - Sec22a protein_coding processed_transcript MGP_CBAJ_T0043840.1 MGP_CBAJ_G0022469.1 mouse_genomes_project 16 35786540 35801444 - Sec22a protein_coding retained_intron MGP_CBAJ_T0043841.1 MGP_CBAJ_G0022469.1 mouse_genomes_project 16 35798301 35801481 - Sec22a protein_coding retained_intron MGP_CBAJ_T0043842.1 MGP_CBAJ_G0022469.1 mouse_genomes_project 16 35798673 35801476 - Sec22a protein_coding processed_transcript MGP_CBAJ_T0010043.1 MGP_CBAJ_G0008181.1 mouse_genomes_project 16 101380121 101380189 + Gm28003 miRNA miRNA MGP_CBAJ_T0013013.1 MGP_CBAJ_G0011125.1 mouse_genomes_project 16 63896783 63897186 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0009986.1 MGP_CBAJ_G0008124.1 mouse_genomes_project 16 1939388 1939474 - Mir6364 miRNA miRNA MGP_CBAJ_T0043575.1 MGP_CBAJ_G0022408.1 mouse_genomes_project 16 29198546 29276587 + MGP_CBAJ_P0043575 Opa1 protein_coding protein_coding MGP_CBAJ_T0043576.1 MGP_CBAJ_G0022408.1 mouse_genomes_project 16 29198590 29232195 + Opa1 protein_coding retained_intron MGP_CBAJ_T0043577.1 MGP_CBAJ_G0022408.1 mouse_genomes_project 16 29198592 29273587 + MGP_CBAJ_P0043577 Opa1 protein_coding protein_coding MGP_CBAJ_T0043578.1 MGP_CBAJ_G0022408.1 mouse_genomes_project 16 29198592 29268678 + MGP_CBAJ_P0043578 Opa1 protein_coding protein_coding MGP_CBAJ_T0043579.1 MGP_CBAJ_G0022408.1 mouse_genomes_project 16 29198592 29247825 + MGP_CBAJ_P0043579 Opa1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0043580.1 MGP_CBAJ_G0022408.1 mouse_genomes_project 16 29198604 29273590 + Opa1 protein_coding retained_intron MGP_CBAJ_T0043581.1 MGP_CBAJ_G0022408.1 mouse_genomes_project 16 29204662 29228477 + MGP_CBAJ_P0043581 Opa1 protein_coding protein_coding MGP_CBAJ_T0043582.1 MGP_CBAJ_G0022408.1 mouse_genomes_project 16 29234195 29236278 + Opa1 protein_coding retained_intron MGP_CBAJ_T0044254.1 MGP_CBAJ_G0022575.1 mouse_genomes_project 16 51066426 51223381 + MGP_CBAJ_P0044254 protein_coding protein_coding MGP_CBAJ_T0044694.1 MGP_CBAJ_G0022737.1 mouse_genomes_project 16 99309265 99311415 + MGP_CBAJ_P0044694 Olig1 protein_coding protein_coding MGP_CBAJ_T0044610.1 MGP_CBAJ_G0022707.1 mouse_genomes_project 16 96704183 96704771 + MGP_CBAJ_P0044610 Krtap6-1 protein_coding protein_coding MGP_CBAJ_T0013007.1 MGP_CBAJ_G0011119.1 mouse_genomes_project 16 48900225 48902036 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0042650.1 MGP_CBAJ_G0022189.1 mouse_genomes_project 16 1912840 1927561 - MGP_CBAJ_P0042650 Nagpa protein_coding protein_coding MGP_CBAJ_T0042651.1 MGP_CBAJ_G0022189.1 mouse_genomes_project 16 1912840 1927551 - MGP_CBAJ_P0042651 Nagpa protein_coding protein_coding MGP_CBAJ_T0042652.1 MGP_CBAJ_G0022189.1 mouse_genomes_project 16 1912938 1921314 - Nagpa protein_coding processed_transcript MGP_CBAJ_T0042653.1 MGP_CBAJ_G0022189.1 mouse_genomes_project 16 1923361 1927026 - Nagpa protein_coding retained_intron MGP_CBAJ_T0042993.1 MGP_CBAJ_G0022272.1 mouse_genomes_project 16 15140578 15142896 - MGP_CBAJ_P0042993 Sdf2l1 protein_coding protein_coding MGP_CBAJ_T0100232.1 MGP_CBAJ_G0038487.1 mouse_genomes_project 16 84566257 84566387 - Gm25038 snoRNA snoRNA MGP_CBAJ_T0003610.1 MGP_CBAJ_G0003267.1 mouse_genomes_project 16 47682390 47710834 + Gm15638 antisense antisense MGP_CBAJ_T0003611.1 MGP_CBAJ_G0003267.1 mouse_genomes_project 16 47682397 47694050 + Gm15638 antisense antisense MGP_CBAJ_T0003612.1 MGP_CBAJ_G0003267.1 mouse_genomes_project 16 47682402 47685453 + Gm15638 antisense antisense MGP_CBAJ_T0044451.1 MGP_CBAJ_G0022645.1 mouse_genomes_project 16 69048620 69056133 + MGP_CBAJ_P0044451 Cggbp1 protein_coding protein_coding MGP_CBAJ_T0044452.1 MGP_CBAJ_G0022645.1 mouse_genomes_project 16 69049326 69052610 + Cggbp1 protein_coding retained_intron MGP_CBAJ_T0044404.1 MGP_CBAJ_G0022621.1 mouse_genomes_project 16 62365023 62367027 - MGP_CBAJ_P0044404 protein_coding protein_coding MGP_CBAJ_T0044121.1 MGP_CBAJ_G0022540.1 mouse_genomes_project 16 45999676 46009181 + Cfap44 protein_coding retained_intron MGP_CBAJ_T0044122.1 MGP_CBAJ_G0022540.1 mouse_genomes_project 16 45999679 46097293 + MGP_CBAJ_P0044122 Cfap44 protein_coding protein_coding MGP_CBAJ_T0044123.1 MGP_CBAJ_G0022540.1 mouse_genomes_project 16 45999685 46096296 + MGP_CBAJ_P0044123 Cfap44 protein_coding unknown_likely_coding MGP_CBAJ_T0044124.1 MGP_CBAJ_G0022540.1 mouse_genomes_project 16 45999702 46006242 + Cfap44 protein_coding retained_intron MGP_CBAJ_T0044125.1 MGP_CBAJ_G0022540.1 mouse_genomes_project 16 46005668 46096959 + MGP_CBAJ_P0044125 Cfap44 protein_coding protein_coding MGP_CBAJ_T0044126.1 MGP_CBAJ_G0022540.1 mouse_genomes_project 16 46012867 46036379 + Cfap44 protein_coding retained_intron MGP_CBAJ_T0044127.1 MGP_CBAJ_G0022540.1 mouse_genomes_project 16 46038362 46043524 + Cfap44 protein_coding processed_transcript MGP_CBAJ_T0044128.1 MGP_CBAJ_G0022540.1 mouse_genomes_project 16 46067903 46096959 + MGP_CBAJ_P0044128 Cfap44 protein_coding protein_coding MGP_CBAJ_T0044129.1 MGP_CBAJ_G0022540.1 mouse_genomes_project 16 46083592 46097293 + Cfap44 protein_coding retained_intron MGP_CBAJ_T0017235.1 MGP_CBAJ_G0015057.1 mouse_genomes_project 16 22105925 22161684 + B630019A10Rik processed_transcript processed_transcript MGP_CBAJ_T0098960.1 MGP_CBAJ_G0037215.1 mouse_genomes_project 16 38956737 38956877 + Gm25140 snRNA snRNA MGP_CBAJ_T0003599.1 MGP_CBAJ_G0003258.1 mouse_genomes_project 16 36486934 36505610 - Gm15564 antisense antisense MGP_CBAJ_T0003600.1 MGP_CBAJ_G0003258.1 mouse_genomes_project 16 36486935 36507556 - Gm15564 antisense antisense MGP_CBAJ_T0003601.1 MGP_CBAJ_G0003258.1 mouse_genomes_project 16 36486957 36505670 - Gm15564 antisense antisense MGP_CBAJ_T0042891.1 MGP_CBAJ_G0022248.1 mouse_genomes_project 16 12279255 12286392 + MGP_CBAJ_P0042891 Gm1758 protein_coding protein_coding MGP_CBAJ_T0098935.1 MGP_CBAJ_G0037190.1 mouse_genomes_project 16 7460811 7460914 + Gm24392 snRNA snRNA MGP_CBAJ_T0044350.1 MGP_CBAJ_G0022601.1 mouse_genomes_project 16 60370621 60694928 - MGP_CBAJ_P0044350 Cmss1 protein_coding protein_coding MGP_CBAJ_T0044234.1 MGP_CBAJ_G0022568.1 mouse_genomes_project 16 50389847 50602279 + MGP_CBAJ_P0044234 Morc1 protein_coding protein_coding MGP_CBAJ_T0044505.1 MGP_CBAJ_G0022659.1 mouse_genomes_project 16 83005813 83126918 + MGP_CBAJ_P0044505 Usp25 protein_coding protein_coding MGP_CBAJ_T0044040.1 MGP_CBAJ_G0022525.1 mouse_genomes_project 16 39979915 40132055 + MGP_CBAJ_P0044040 Igsf11 protein_coding protein_coding MGP_CBAJ_T0043517.1 MGP_CBAJ_G0022391.1 mouse_genomes_project 16 23499759 24136906 + MGP_CBAJ_P0043517 Lpp protein_coding protein_coding MGP_CBAJ_T0043518.1 MGP_CBAJ_G0022391.1 mouse_genomes_project 16 23562404 24136906 + MGP_CBAJ_P0043518 Lpp protein_coding protein_coding MGP_CBAJ_T0043519.1 MGP_CBAJ_G0022391.1 mouse_genomes_project 16 23852742 24136906 + MGP_CBAJ_P0043519 Lpp protein_coding protein_coding MGP_CBAJ_T0042596.1 MGP_CBAJ_G0022173.1 mouse_genomes_project 16 1360455 1378303 - MGP_CBAJ_P0042596 Nmral1 protein_coding protein_coding MGP_CBAJ_T0042597.1 MGP_CBAJ_G0022173.1 mouse_genomes_project 16 1361713 1378350 - MGP_CBAJ_P0042597 Nmral1 protein_coding protein_coding MGP_CBAJ_T0042598.1 MGP_CBAJ_G0022173.1 mouse_genomes_project 16 1361713 1378550 - MGP_CBAJ_P0042598 Nmral1 protein_coding protein_coding MGP_CBAJ_T0042599.1 MGP_CBAJ_G0022173.1 mouse_genomes_project 16 1362691 1378306 - MGP_CBAJ_P0042599 Nmral1 protein_coding protein_coding MGP_CBAJ_T0042600.1 MGP_CBAJ_G0022173.1 mouse_genomes_project 16 1364905 1378282 - Nmral1 protein_coding retained_intron MGP_CBAJ_T0042601.1 MGP_CBAJ_G0022173.1 mouse_genomes_project 16 1366221 1378298 - Nmral1 protein_coding retained_intron MGP_CBAJ_T0042623.1 MGP_CBAJ_G0022179.1 mouse_genomes_project 16 1621548 1623458 + MGP_CBAJ_P0042623 Nudt16l1 protein_coding protein_coding MGP_CBAJ_T0010000.1 MGP_CBAJ_G0008138.1 mouse_genomes_project 16 16465776 16465864 - Gm24572 miRNA miRNA MGP_CBAJ_T0044030.1 MGP_CBAJ_G0022521.1 mouse_genomes_project 16 39649946 39776461 - MGP_CBAJ_P0044030 Arhgap31 protein_coding protein_coding MGP_CBAJ_T0044031.1 MGP_CBAJ_G0022521.1 mouse_genomes_project 16 39674526 39776086 - Arhgap31 protein_coding processed_transcript MGP_CBAJ_T0044032.1 MGP_CBAJ_G0022521.1 mouse_genomes_project 16 39694874 39776085 - Arhgap31 protein_coding retained_intron MGP_CBAJ_T0044606.1 MGP_CBAJ_G0022703.1 mouse_genomes_project 16 96603131 96603592 - MGP_CBAJ_P0044606 Krtap19-9b protein_coding protein_coding MGP_CBAJ_T0098959.1 MGP_CBAJ_G0037214.1 mouse_genomes_project 16 37211618 37211721 + Gm25903 snRNA snRNA MGP_CBAJ_T0044295.1 MGP_CBAJ_G0022587.1 mouse_genomes_project 16 58881194 58920759 + MGP_CBAJ_P0044295 Zbtb11 protein_coding protein_coding MGP_CBAJ_T0044296.1 MGP_CBAJ_G0022587.1 mouse_genomes_project 16 58900547 58903766 + Zbtb11 protein_coding retained_intron MGP_CBAJ_T0044297.1 MGP_CBAJ_G0022587.1 mouse_genomes_project 16 58916998 58920759 + Zbtb11 protein_coding retained_intron MGP_CBAJ_T0043273.1 MGP_CBAJ_G0022336.1 mouse_genomes_project 16 18099353 18111423 + MGP_CBAJ_P0043273 B3gnt5 protein_coding protein_coding MGP_CBAJ_T0043274.1 MGP_CBAJ_G0022336.1 mouse_genomes_project 16 18099379 18111943 + MGP_CBAJ_P0043274 B3gnt5 protein_coding protein_coding MGP_CBAJ_T0043275.1 MGP_CBAJ_G0022336.1 mouse_genomes_project 16 18099379 18111653 + MGP_CBAJ_P0043275 B3gnt5 protein_coding protein_coding MGP_CBAJ_T0043276.1 MGP_CBAJ_G0022336.1 mouse_genomes_project 16 18099544 18104812 + B3gnt5 protein_coding processed_transcript MGP_CBAJ_T0043277.1 MGP_CBAJ_G0022336.1 mouse_genomes_project 16 18099731 18108028 + B3gnt5 protein_coding retained_intron MGP_CBAJ_T0043278.1 MGP_CBAJ_G0022336.1 mouse_genomes_project 16 18099732 18103501 + B3gnt5 protein_coding retained_intron MGP_CBAJ_T0043279.1 MGP_CBAJ_G0022336.1 mouse_genomes_project 16 18100199 18109814 + MGP_CBAJ_P0043279 B3gnt5 protein_coding protein_coding MGP_CBAJ_T0043919.1 MGP_CBAJ_G0022494.1 mouse_genomes_project 16 37625158 37718726 - Eaf2 protein_coding processed_transcript MGP_CBAJ_T0043920.1 MGP_CBAJ_G0022494.1 mouse_genomes_project 16 37625159 37718726 - Eaf2 protein_coding processed_transcript MGP_CBAJ_T0043921.1 MGP_CBAJ_G0022494.1 mouse_genomes_project 16 37625160 37642579 - MGP_CBAJ_P0043921 Eaf2 protein_coding protein_coding MGP_CBAJ_T0043922.1 MGP_CBAJ_G0022494.1 mouse_genomes_project 16 37625239 37665856 - Eaf2 protein_coding processed_transcript MGP_CBAJ_T0043923.1 MGP_CBAJ_G0022494.1 mouse_genomes_project 16 37625294 37665801 - MGP_CBAJ_P0043923 Eaf2 protein_coding protein_coding MGP_CBAJ_T0043924.1 MGP_CBAJ_G0022494.1 mouse_genomes_project 16 37658585 37718537 - Eaf2 protein_coding retained_intron MGP_CBAJ_T0042649.1 MGP_CBAJ_G0022188.1 mouse_genomes_project 16 1865175 1904837 + MGP_CBAJ_P0042649 Sec14l5 protein_coding unknown_likely_coding MGP_CBAJ_T0013014.1 MGP_CBAJ_G0011126.1 mouse_genomes_project 16 64157791 64158727 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0043697.1 MGP_CBAJ_G0022440.1 mouse_genomes_project 16 32393524 32402833 + MGP_CBAJ_P0043697 Tctex1d2 protein_coding protein_coding MGP_CBAJ_T0043698.1 MGP_CBAJ_G0022440.1 mouse_genomes_project 16 32393554 32402831 + Tctex1d2 protein_coding retained_intron MGP_CBAJ_T0044746.1 MGP_CBAJ_G0022748.1 mouse_genomes_project 16 99797055 100062956 - MGP_CBAJ_P0044746 Atp5o protein_coding protein_coding MGP_CBAJ_T0044784.1 MGP_CBAJ_G0022748.1 mouse_genomes_project 16 100061126 100067854 - MGP_CBAJ_P0044784 Atp5o protein_coding protein_coding MGP_CBAJ_T0044785.1 MGP_CBAJ_G0022748.1 mouse_genomes_project 16 100061131 100062655 - Atp5o protein_coding retained_intron MGP_CBAJ_T0044786.1 MGP_CBAJ_G0022748.1 mouse_genomes_project 16 100061133 100067715 - MGP_CBAJ_P0044786 Atp5o protein_coding nonsense_mediated_decay MGP_CBAJ_T0044787.1 MGP_CBAJ_G0022748.1 mouse_genomes_project 16 100061225 100067443 - Atp5o protein_coding processed_transcript MGP_CBAJ_T0044788.1 MGP_CBAJ_G0022748.1 mouse_genomes_project 16 100062832 100067587 - Atp5o protein_coding processed_transcript MGP_CBAJ_T0044789.1 MGP_CBAJ_G0022748.1 mouse_genomes_project 16 100064139 100067720 - Atp5o protein_coding retained_intron MGP_CBAJ_T0045730.1 MGP_CBAJ_G0023043.1 mouse_genomes_project 17 26199685 26208776 + MGP_CBAJ_P0045730 Gm5819 protein_coding protein_coding MGP_CBAJ_T0047722.1 MGP_CBAJ_G0023564.1 mouse_genomes_project 17 53342967 53357821 - MGP_CBAJ_P0047722 protein_coding protein_coding MGP_CBAJ_T0047020.1 MGP_CBAJ_G0023343.1 mouse_genomes_project 17 38575124 38594002 + MGP_CBAJ_P0047020 H2-Q4 protein_coding protein_coding MGP_CBAJ_T0046210.1 MGP_CBAJ_G0023153.1 mouse_genomes_project 17 30668811 30717541 - MGP_CBAJ_P0046210 Stk38 protein_coding protein_coding MGP_CBAJ_T0046211.1 MGP_CBAJ_G0023153.1 mouse_genomes_project 17 30668943 30671004 - Stk38 protein_coding processed_transcript MGP_CBAJ_T0046212.1 MGP_CBAJ_G0023153.1 mouse_genomes_project 17 30670163 30717541 - MGP_CBAJ_P0046212 Stk38 protein_coding protein_coding MGP_CBAJ_T0046213.1 MGP_CBAJ_G0023153.1 mouse_genomes_project 17 30670865 30680325 - Stk38 protein_coding retained_intron MGP_CBAJ_T0046214.1 MGP_CBAJ_G0023153.1 mouse_genomes_project 17 30671018 30672646 - Stk38 protein_coding processed_transcript MGP_CBAJ_T0046215.1 MGP_CBAJ_G0023153.1 mouse_genomes_project 17 30672208 30680608 - Stk38 protein_coding retained_intron MGP_CBAJ_T0046216.1 MGP_CBAJ_G0023153.1 mouse_genomes_project 17 30672269 30677404 - Stk38 protein_coding processed_transcript MGP_CBAJ_T0046217.1 MGP_CBAJ_G0023153.1 mouse_genomes_project 17 30672269 30677939 - Stk38 protein_coding processed_transcript MGP_CBAJ_T0046218.1 MGP_CBAJ_G0023153.1 mouse_genomes_project 17 30672497 30677689 - Stk38 protein_coding processed_transcript MGP_CBAJ_T0046219.1 MGP_CBAJ_G0023153.1 mouse_genomes_project 17 30675321 30677674 - Stk38 protein_coding processed_transcript MGP_CBAJ_T0046220.1 MGP_CBAJ_G0023153.1 mouse_genomes_project 17 30677694 30717549 - Stk38 protein_coding processed_transcript MGP_CBAJ_T0046221.1 MGP_CBAJ_G0023153.1 mouse_genomes_project 17 30681682 30702987 - Stk38 protein_coding retained_intron MGP_CBAJ_T0046222.1 MGP_CBAJ_G0023153.1 mouse_genomes_project 17 30686064 30689551 - Stk38 protein_coding processed_transcript MGP_CBAJ_T0046223.1 MGP_CBAJ_G0023153.1 mouse_genomes_project 17 30689537 30717339 - Stk38 protein_coding processed_transcript MGP_CBAJ_T0046224.1 MGP_CBAJ_G0023153.1 mouse_genomes_project 17 30700495 30717500 - Stk38 protein_coding processed_transcript MGP_CBAJ_T0045434.1 MGP_CBAJ_G0022968.1 mouse_genomes_project 17 24433996 24444493 + MGP_CBAJ_P0045434 Pkmyt1 protein_coding protein_coding MGP_CBAJ_T0097987.1 MGP_CBAJ_G0036260.1 mouse_genomes_project 17 79862040 79862148 - Gm23115 rRNA rRNA MGP_CBAJ_T0047614.1 MGP_CBAJ_G0023539.1 mouse_genomes_project 17 51865372 51867215 + MGP_CBAJ_P0047614 Tbcc protein_coding protein_coding MGP_CBAJ_T0047672.1 MGP_CBAJ_G0023554.1 mouse_genomes_project 17 52786597 52788136 - MGP_CBAJ_P0047672 Tomm6 protein_coding protein_coding MGP_CBAJ_T0047674.1 MGP_CBAJ_G0023554.1 mouse_genomes_project 17 52786691 52788339 - Tomm6 protein_coding retained_intron MGP_CBAJ_T0047675.1 MGP_CBAJ_G0023554.1 mouse_genomes_project 17 52786691 52788021 - MGP_CBAJ_P0047675 Tomm6 protein_coding protein_coding MGP_CBAJ_T0098987.1 MGP_CBAJ_G0037242.1 mouse_genomes_project 17 25202657 25202764 - Gm25618 snRNA snRNA MGP_CBAJ_T0045525.1 MGP_CBAJ_G0022994.1 mouse_genomes_project 17 25042982 25048574 - MGP_CBAJ_P0045525 1600002H07Rik protein_coding protein_coding MGP_CBAJ_T0045526.1 MGP_CBAJ_G0022994.1 mouse_genomes_project 17 25043167 25048635 - 1600002H07Rik protein_coding retained_intron MGP_CBAJ_T0045527.1 MGP_CBAJ_G0022994.1 mouse_genomes_project 17 25043474 25048476 - MGP_CBAJ_P0045527 1600002H07Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0045528.1 MGP_CBAJ_G0022994.1 mouse_genomes_project 17 25046962 25048515 - 1600002H07Rik protein_coding retained_intron MGP_CBAJ_T0045529.1 MGP_CBAJ_G0022994.1 mouse_genomes_project 17 25047564 25048537 - 1600002H07Rik protein_coding retained_intron MGP_CBAJ_T0045881.1 MGP_CBAJ_G0023080.1 mouse_genomes_project 17 26960555 27003123 - MGP_CBAJ_P0045881 Rab40c protein_coding nonsense_mediated_decay MGP_CBAJ_T0045882.1 MGP_CBAJ_G0023080.1 mouse_genomes_project 17 26960555 27003219 - MGP_CBAJ_P0045882 Rab40c protein_coding protein_coding MGP_CBAJ_T0045883.1 MGP_CBAJ_G0023080.1 mouse_genomes_project 17 26960555 27003209 - MGP_CBAJ_P0045883 Rab40c protein_coding protein_coding MGP_CBAJ_T0045884.1 MGP_CBAJ_G0023080.1 mouse_genomes_project 17 26960555 27005794 - MGP_CBAJ_P0045884 Rab40c protein_coding protein_coding MGP_CBAJ_T0045885.1 MGP_CBAJ_G0023080.1 mouse_genomes_project 17 26960558 26997199 - Rab40c protein_coding processed_transcript MGP_CBAJ_T0045886.1 MGP_CBAJ_G0023080.1 mouse_genomes_project 17 26962069 27003073 - MGP_CBAJ_P0045886 Rab40c protein_coding protein_coding MGP_CBAJ_T0045887.1 MGP_CBAJ_G0023080.1 mouse_genomes_project 17 26962080 27005807 - MGP_CBAJ_P0045887 Rab40c protein_coding protein_coding MGP_CBAJ_T0045888.1 MGP_CBAJ_G0023080.1 mouse_genomes_project 17 26963204 27003257 - Rab40c protein_coding processed_transcript MGP_CBAJ_T0045889.1 MGP_CBAJ_G0023080.1 mouse_genomes_project 17 26963523 27005791 - MGP_CBAJ_P0045889 Rab40c protein_coding protein_coding MGP_CBAJ_T0047991.1 MGP_CBAJ_G0023668.1 mouse_genomes_project 17 69817070 70130103 - MGP_CBAJ_P0047991 Efna5 protein_coding protein_coding MGP_CBAJ_T0047992.1 MGP_CBAJ_G0023668.1 mouse_genomes_project 17 69820213 70129930 - MGP_CBAJ_P0047992 Efna5 protein_coding protein_coding MGP_CBAJ_T0046703.1 MGP_CBAJ_G0023272.1 mouse_genomes_project 17 37041954 37047163 - MGP_CBAJ_P0046703 H2-Aa protein_coding protein_coding MGP_CBAJ_T0046704.1 MGP_CBAJ_G0023272.1 mouse_genomes_project 17 37041975 37047127 - MGP_CBAJ_P0046704 H2-Aa protein_coding protein_coding MGP_CBAJ_T0046705.1 MGP_CBAJ_G0023272.1 mouse_genomes_project 17 37042980 37047113 - H2-Aa protein_coding retained_intron MGP_CBAJ_T0046706.1 MGP_CBAJ_G0023272.1 mouse_genomes_project 17 37045811 37047155 - H2-Aa protein_coding processed_transcript MGP_CBAJ_T0097986.1 MGP_CBAJ_G0036259.1 mouse_genomes_project 17 70361309 70361420 - Gm25348 rRNA rRNA MGP_CBAJ_T0003669.1 MGP_CBAJ_G0003304.1 mouse_genomes_project 17 35320219 35335414 + Gm26693 antisense antisense MGP_CBAJ_T0047837.1 MGP_CBAJ_G0023604.1 mouse_genomes_project 17 62157453 62166057 + MGP_CBAJ_P0047837 Ccdc94 protein_coding protein_coding MGP_CBAJ_T0098983.1 MGP_CBAJ_G0037238.1 mouse_genomes_project 17 5134321 5134486 - Gm25730 snRNA snRNA MGP_CBAJ_T0099014.1 MGP_CBAJ_G0037269.1 mouse_genomes_project 17 94294894 94295001 - Gm24492 snRNA snRNA MGP_CBAJ_T0101696.1 MGP_CBAJ_G0039727.1 mouse_genomes_project 17 20437102 20437706 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0048314.1 MGP_CBAJ_G0023776.1 mouse_genomes_project 17 94168135 94172630 - MGP_CBAJ_P0048314 Zfp36l2 protein_coding protein_coding MGP_CBAJ_T0013068.1 MGP_CBAJ_G0011180.1 mouse_genomes_project 17 39499843 39500388 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0046033.1 MGP_CBAJ_G0023116.1 mouse_genomes_project 17 28517412 28532162 - MGP_CBAJ_P0046033 Lemd2 protein_coding protein_coding MGP_CBAJ_T0013086.1 MGP_CBAJ_G0011198.1 mouse_genomes_project 17 41593140 41593512 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0047615.1 MGP_CBAJ_G0023540.1 mouse_genomes_project 17 51893724 51910925 + MGP_CBAJ_P0047615 Prph2 protein_coding protein_coding MGP_CBAJ_T0047616.1 MGP_CBAJ_G0023540.1 mouse_genomes_project 17 51893743 51906339 + Prph2 protein_coding retained_intron MGP_CBAJ_T0048375.1 MGP_CBAJ_G0023801.1 mouse_genomes_project 17 97847366 97893051 - MGP_CBAJ_P0048375 1700011E24Rik protein_coding protein_coding MGP_CBAJ_T0048376.1 MGP_CBAJ_G0023801.1 mouse_genomes_project 17 97847371 97892997 - MGP_CBAJ_P0048376 1700011E24Rik protein_coding protein_coding MGP_CBAJ_T0048377.1 MGP_CBAJ_G0023801.1 mouse_genomes_project 17 97874236 97893018 - MGP_CBAJ_P0048377 1700011E24Rik protein_coding protein_coding MGP_CBAJ_T0048378.1 MGP_CBAJ_G0023801.1 mouse_genomes_project 17 97880521 97892945 - 1700011E24Rik protein_coding processed_transcript MGP_CBAJ_T0048379.1 MGP_CBAJ_G0023801.1 mouse_genomes_project 17 97880531 97892945 - 1700011E24Rik protein_coding processed_transcript MGP_CBAJ_T0006805.1 MGP_CBAJ_G0005600.1 mouse_genomes_project 17 21596572 21600265 - Gm26753 lincRNA lincRNA MGP_CBAJ_T0010081.1 MGP_CBAJ_G0008219.1 mouse_genomes_project 17 37802484 37802547 - Mir6971 miRNA miRNA MGP_CBAJ_T0046561.1 MGP_CBAJ_G0023242.1 mouse_genomes_project 17 36436338 36442813 + MGP_CBAJ_P0046561 Cd320 protein_coding protein_coding MGP_CBAJ_T0046562.1 MGP_CBAJ_G0023242.1 mouse_genomes_project 17 36436350 36439565 + Cd320 protein_coding retained_intron MGP_CBAJ_T0046563.1 MGP_CBAJ_G0023242.1 mouse_genomes_project 17 36436673 36441790 + MGP_CBAJ_P0046563 Cd320 protein_coding protein_coding MGP_CBAJ_T0047431.1 MGP_CBAJ_G0023494.1 mouse_genomes_project 17 50319418 50323029 + MGP_CBAJ_P0047431 Slc35b2 protein_coding protein_coding MGP_CBAJ_T0047503.1 MGP_CBAJ_G0023505.1 mouse_genomes_project 17 50990991 50998194 - MGP_CBAJ_P0047503 Mad2l1bp protein_coding protein_coding MGP_CBAJ_T0048253.1 MGP_CBAJ_G0023749.1 mouse_genomes_project 17 89065814 89071411 + MGP_CBAJ_P0048253 4921513D11Rik protein_coding protein_coding MGP_CBAJ_T0003654.1 MGP_CBAJ_G0003293.1 mouse_genomes_project 17 27844590 27849309 - Gm17218 antisense antisense MGP_CBAJ_T0047432.1 MGP_CBAJ_G0023495.1 mouse_genomes_project 17 50323129 50328639 - MGP_CBAJ_P0047432 Hsp90ab1 protein_coding protein_coding MGP_CBAJ_T0047433.1 MGP_CBAJ_G0023495.1 mouse_genomes_project 17 50324212 50325094 - Hsp90ab1 protein_coding retained_intron MGP_CBAJ_T0047434.1 MGP_CBAJ_G0023495.1 mouse_genomes_project 17 50324372 50328621 - MGP_CBAJ_P0047434 Hsp90ab1 protein_coding protein_coding MGP_CBAJ_T0047435.1 MGP_CBAJ_G0023495.1 mouse_genomes_project 17 50324935 50328623 - MGP_CBAJ_P0047435 Hsp90ab1 protein_coding protein_coding MGP_CBAJ_T0047436.1 MGP_CBAJ_G0023495.1 mouse_genomes_project 17 50325802 50326937 - Hsp90ab1 protein_coding retained_intron MGP_CBAJ_T0047437.1 MGP_CBAJ_G0023495.1 mouse_genomes_project 17 50326018 50328623 - MGP_CBAJ_P0047437 Hsp90ab1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047438.1 MGP_CBAJ_G0023495.1 mouse_genomes_project 17 50326373 50328639 - Hsp90ab1 protein_coding retained_intron MGP_CBAJ_T0047439.1 MGP_CBAJ_G0023495.1 mouse_genomes_project 17 50326892 50327913 - MGP_CBAJ_P0047439 Hsp90ab1 protein_coding protein_coding MGP_CBAJ_T0101680.1 MGP_CBAJ_G0039711.1 mouse_genomes_project 17 18026153 18027433 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0046348.1 MGP_CBAJ_G0023188.1 mouse_genomes_project 17 33754543 33775097 - MGP_CBAJ_P0046348 Wdr4 protein_coding protein_coding MGP_CBAJ_T0046349.1 MGP_CBAJ_G0023188.1 mouse_genomes_project 17 33754544 33775518 - MGP_CBAJ_P0046349 Wdr4 protein_coding protein_coding MGP_CBAJ_T0046350.1 MGP_CBAJ_G0023188.1 mouse_genomes_project 17 33754544 33775035 - MGP_CBAJ_P0046350 Wdr4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046351.1 MGP_CBAJ_G0023188.1 mouse_genomes_project 17 33754546 33775035 - MGP_CBAJ_P0046351 Wdr4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046352.1 MGP_CBAJ_G0023188.1 mouse_genomes_project 17 33756347 33761510 - Wdr4 protein_coding retained_intron MGP_CBAJ_T0046353.1 MGP_CBAJ_G0023188.1 mouse_genomes_project 17 33759670 33763796 - Wdr4 protein_coding retained_intron MGP_CBAJ_T0046354.1 MGP_CBAJ_G0023188.1 mouse_genomes_project 17 33763265 33772679 - Wdr4 protein_coding retained_intron MGP_CBAJ_T0046355.1 MGP_CBAJ_G0023188.1 mouse_genomes_project 17 33763753 33782661 - MGP_CBAJ_P0046355 Wdr4 protein_coding protein_coding MGP_CBAJ_T0046356.1 MGP_CBAJ_G0023188.1 mouse_genomes_project 17 33763763 33775045 - MGP_CBAJ_P0046356 Wdr4 protein_coding protein_coding MGP_CBAJ_T0046357.1 MGP_CBAJ_G0023188.1 mouse_genomes_project 17 33775209 33782721 - Wdr4 protein_coding processed_transcript MGP_CBAJ_T0045351.1 MGP_CBAJ_G0022935.1 mouse_genomes_project 17 21834544 21834803 + MGP_CBAJ_P0045351 Gm10509 protein_coding protein_coding MGP_CBAJ_T0045349.1 MGP_CBAJ_G0022933.1 mouse_genomes_project 17 21676670 21701817 + MGP_CBAJ_P0045349 Zfp948 protein_coding protein_coding MGP_CBAJ_T0047358.1 MGP_CBAJ_G0023462.1 mouse_genomes_project 17 44960679 44997357 - MGP_CBAJ_P0047358 Crisp2 protein_coding protein_coding MGP_CBAJ_T0047359.1 MGP_CBAJ_G0023462.1 mouse_genomes_project 17 44986657 44997388 - MGP_CBAJ_P0047359 Crisp2 protein_coding protein_coding MGP_CBAJ_T0047360.1 MGP_CBAJ_G0023462.1 mouse_genomes_project 17 44988350 44997318 - MGP_CBAJ_P0047360 Crisp2 protein_coding protein_coding MGP_CBAJ_T0047361.1 MGP_CBAJ_G0023462.1 mouse_genomes_project 17 44988426 44997309 - MGP_CBAJ_P0047361 Crisp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047362.1 MGP_CBAJ_G0023462.1 mouse_genomes_project 17 44996497 45003833 - Crisp2 protein_coding processed_transcript MGP_CBAJ_T0048351.1 MGP_CBAJ_G0023795.1 mouse_genomes_project 17 97370616 97410174 + MGP_CBAJ_P0048351 Rhoq protein_coding protein_coding MGP_CBAJ_T0048352.1 MGP_CBAJ_G0023795.1 mouse_genomes_project 17 97370826 97405203 + MGP_CBAJ_P0048352 Rhoq protein_coding protein_coding MGP_CBAJ_T0045496.1 MGP_CBAJ_G0022990.1 mouse_genomes_project 17 24980763 24989453 - Amdhd2 protein_coding retained_intron MGP_CBAJ_T0045497.1 MGP_CBAJ_G0022990.1 mouse_genomes_project 17 24980763 24981670 - Amdhd2 protein_coding processed_transcript MGP_CBAJ_T0045498.1 MGP_CBAJ_G0022990.1 mouse_genomes_project 17 24980763 24989489 - MGP_CBAJ_P0045498 Amdhd2 protein_coding protein_coding MGP_CBAJ_T0045499.1 MGP_CBAJ_G0022990.1 mouse_genomes_project 17 24980765 24982523 - MGP_CBAJ_P0045499 Amdhd2 protein_coding protein_coding MGP_CBAJ_T0045500.1 MGP_CBAJ_G0022990.1 mouse_genomes_project 17 24983272 24988276 - MGP_CBAJ_P0045500 Amdhd2 protein_coding protein_coding MGP_CBAJ_T0045501.1 MGP_CBAJ_G0022990.1 mouse_genomes_project 17 24987177 24988659 - Amdhd2 protein_coding retained_intron MGP_CBAJ_T0048207.1 MGP_CBAJ_G0023730.1 mouse_genomes_project 17 83828833 84281774 + MGP_CBAJ_P0048207 Ltbp1 protein_coding protein_coding MGP_CBAJ_T0048208.1 MGP_CBAJ_G0023730.1 mouse_genomes_project 17 84041325 84281343 + MGP_CBAJ_P0048208 Ltbp1 protein_coding protein_coding MGP_CBAJ_T0048209.1 MGP_CBAJ_G0023730.1 mouse_genomes_project 17 84041325 84233202 + MGP_CBAJ_P0048209 Ltbp1 protein_coding protein_coding MGP_CBAJ_T0048210.1 MGP_CBAJ_G0023730.1 mouse_genomes_project 17 84041426 84281329 + MGP_CBAJ_P0048210 Ltbp1 protein_coding protein_coding MGP_CBAJ_T0048211.1 MGP_CBAJ_G0023730.1 mouse_genomes_project 17 84168738 84173125 + Ltbp1 protein_coding retained_intron MGP_CBAJ_T0048212.1 MGP_CBAJ_G0023730.1 mouse_genomes_project 17 84274198 84282519 + Ltbp1 protein_coding retained_intron MGP_CBAJ_T0047866.1 MGP_CBAJ_G0023615.1 mouse_genomes_project 17 62348500 62350767 - MGP_CBAJ_P0047866 Lrg1 protein_coding protein_coding MGP_CBAJ_T0047001.1 MGP_CBAJ_G0023337.1 mouse_genomes_project 17 38242529 38247635 + Atp6v1g2 protein_coding retained_intron MGP_CBAJ_T0047002.1 MGP_CBAJ_G0023337.1 mouse_genomes_project 17 38243957 38246673 + MGP_CBAJ_P0047002 Atp6v1g2 protein_coding protein_coding MGP_CBAJ_T0047003.1 MGP_CBAJ_G0023337.1 mouse_genomes_project 17 38244747 38246772 + MGP_CBAJ_P0047003 Atp6v1g2 protein_coding protein_coding MGP_CBAJ_T0047004.1 MGP_CBAJ_G0023337.1 mouse_genomes_project 17 38244761 38246941 + Atp6v1g2 protein_coding retained_intron MGP_CBAJ_T0047005.1 MGP_CBAJ_G0023337.1 mouse_genomes_project 17 38245433 38247635 + MGP_CBAJ_P0047005 Atp6v1g2 protein_coding protein_coding MGP_CBAJ_T0047006.1 MGP_CBAJ_G0023337.1 mouse_genomes_project 17 38245527 38246835 + Atp6v1g2 protein_coding retained_intron MGP_CBAJ_T0047842.1 MGP_CBAJ_G0023608.1 mouse_genomes_project 17 62213749 62223202 + MGP_CBAJ_P0047842 Mpnd protein_coding protein_coding MGP_CBAJ_T0047843.1 MGP_CBAJ_G0023608.1 mouse_genomes_project 17 62220478 62231568 + MGP_CBAJ_P0047843 Mpnd protein_coding protein_coding MGP_CBAJ_T0047844.1 MGP_CBAJ_G0023608.1 mouse_genomes_project 17 62220485 62231424 + MGP_CBAJ_P0047844 Mpnd protein_coding protein_coding MGP_CBAJ_T0047845.1 MGP_CBAJ_G0023608.1 mouse_genomes_project 17 62220508 62231431 + MGP_CBAJ_P0047845 Mpnd protein_coding protein_coding MGP_CBAJ_T0047846.1 MGP_CBAJ_G0023608.1 mouse_genomes_project 17 62220532 62223600 + Mpnd protein_coding retained_intron MGP_CBAJ_T0047847.1 MGP_CBAJ_G0023608.1 mouse_genomes_project 17 62220610 62231392 + MGP_CBAJ_P0047847 Mpnd protein_coding protein_coding MGP_CBAJ_T0047848.1 MGP_CBAJ_G0023608.1 mouse_genomes_project 17 62221210 62222945 + Mpnd protein_coding retained_intron MGP_CBAJ_T0047849.1 MGP_CBAJ_G0023608.1 mouse_genomes_project 17 62221717 62230275 + MGP_CBAJ_P0047849 Mpnd protein_coding protein_coding MGP_CBAJ_T0047850.1 MGP_CBAJ_G0023608.1 mouse_genomes_project 17 62223220 62229900 + Mpnd protein_coding retained_intron MGP_CBAJ_T0006876.1 MGP_CBAJ_G0005652.1 mouse_genomes_project 17 77440830 77445061 + C030034I22Rik lincRNA lincRNA MGP_CBAJ_T0006877.1 MGP_CBAJ_G0005652.1 mouse_genomes_project 17 77440889 77442360 + C030034I22Rik lincRNA lincRNA MGP_CBAJ_T0047328.1 MGP_CBAJ_G0023437.1 mouse_genomes_project 17 41742784 41744768 + MGP_CBAJ_P0047328 protein_coding protein_coding MGP_CBAJ_T0013104.1 MGP_CBAJ_G0011216.1 mouse_genomes_project 17 59771928 59772274 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0047238.1 MGP_CBAJ_G0023390.1 mouse_genomes_project 17 40361876 40376255 + MGP_CBAJ_P0047238 Trim31 protein_coding protein_coding MGP_CBAJ_T0097990.1 MGP_CBAJ_G0036263.1 mouse_genomes_project 17 93905038 93905147 + Gm23905 rRNA rRNA MGP_CBAJ_T0046112.1 MGP_CBAJ_G0023134.1 mouse_genomes_project 17 29744151 29826458 + MGP_CBAJ_P0046112 Ppard protein_coding protein_coding MGP_CBAJ_T0046113.1 MGP_CBAJ_G0023134.1 mouse_genomes_project 17 29744163 29820667 + Ppard protein_coding retained_intron MGP_CBAJ_T0046114.1 MGP_CBAJ_G0023134.1 mouse_genomes_project 17 29744179 29824148 + Ppard protein_coding processed_transcript MGP_CBAJ_T0046115.1 MGP_CBAJ_G0023134.1 mouse_genomes_project 17 29744204 29824207 + Ppard protein_coding retained_intron MGP_CBAJ_T0046116.1 MGP_CBAJ_G0023134.1 mouse_genomes_project 17 29792336 29793792 + Ppard protein_coding processed_transcript MGP_CBAJ_T0046117.1 MGP_CBAJ_G0023134.1 mouse_genomes_project 17 29792821 29823003 + MGP_CBAJ_P0046117 Ppard protein_coding protein_coding MGP_CBAJ_T0101281.1 MGP_CBAJ_G0039404.1 mouse_genomes_project 17 79884198 79918214 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101282.1 MGP_CBAJ_G0039404.1 mouse_genomes_project 17 79887580 79905328 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0046163.1 MGP_CBAJ_G0023141.1 mouse_genomes_project 17 30148918 30154542 + MGP_CBAJ_P0046163 Clpsl2 protein_coding protein_coding MGP_CBAJ_T0045321.1 MGP_CBAJ_G0022915.1 mouse_genomes_project 17 20719245 20720142 + MGP_CBAJ_P0045321 Vmn1r226 protein_coding protein_coding MGP_CBAJ_T0046709.1 MGP_CBAJ_G0023275.1 mouse_genomes_project 17 37118461 37136896 + MGP_CBAJ_P0046709 Btnl2 protein_coding protein_coding MGP_CBAJ_T0046710.1 MGP_CBAJ_G0023275.1 mouse_genomes_project 17 37118461 37136895 + MGP_CBAJ_P0046710 Btnl2 protein_coding protein_coding MGP_CBAJ_T0099011.1 MGP_CBAJ_G0037266.1 mouse_genomes_project 17 85077067 85077173 + Gm24126 snRNA snRNA MGP_CBAJ_T0047586.1 MGP_CBAJ_G0023526.1 mouse_genomes_project 17 51571615 51585515 + MGP_CBAJ_P0047586 Cul7 protein_coding protein_coding MGP_CBAJ_T0047587.1 MGP_CBAJ_G0023526.1 mouse_genomes_project 17 51571841 51576126 + Cul7 protein_coding retained_intron MGP_CBAJ_T0047588.1 MGP_CBAJ_G0023526.1 mouse_genomes_project 17 51571850 51578241 + Cul7 protein_coding retained_intron MGP_CBAJ_T0047589.1 MGP_CBAJ_G0023526.1 mouse_genomes_project 17 51572701 51585515 + MGP_CBAJ_P0047589 Cul7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047590.1 MGP_CBAJ_G0023526.1 mouse_genomes_project 17 51574129 51576812 + Cul7 protein_coding processed_transcript MGP_CBAJ_T0047591.1 MGP_CBAJ_G0023526.1 mouse_genomes_project 17 51574171 51585515 + MGP_CBAJ_P0047591 Cul7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047592.1 MGP_CBAJ_G0023526.1 mouse_genomes_project 17 51582934 51585515 + Cul7 protein_coding retained_intron MGP_CBAJ_T0047851.1 MGP_CBAJ_G0023609.1 mouse_genomes_project 17 62231530 62254750 - MGP_CBAJ_P0047851 Sh3gl1 protein_coding protein_coding MGP_CBAJ_T0048274.1 MGP_CBAJ_G0023759.1 mouse_genomes_project 17 89852646 89954517 + MGP_CBAJ_P0048274 Arhgef33 protein_coding unknown_likely_coding MGP_CBAJ_T0048275.1 MGP_CBAJ_G0023759.1 mouse_genomes_project 17 89852652 89954517 + MGP_CBAJ_P0048275 Arhgef33 protein_coding unknown_likely_coding MGP_CBAJ_T0048276.1 MGP_CBAJ_G0023759.1 mouse_genomes_project 17 89852782 89958878 + MGP_CBAJ_P0048276 Arhgef33 protein_coding protein_coding MGP_CBAJ_T0045374.1 MGP_CBAJ_G0022947.1 mouse_genomes_project 17 22689719 22706757 + MGP_CBAJ_P0045374 Zfp758 protein_coding protein_coding MGP_CBAJ_T0045375.1 MGP_CBAJ_G0022947.1 mouse_genomes_project 17 22689719 22708033 + MGP_CBAJ_P0045375 Zfp758 protein_coding protein_coding MGP_CBAJ_T0045376.1 MGP_CBAJ_G0022947.1 mouse_genomes_project 17 22689719 22708032 + MGP_CBAJ_P0045376 Zfp758 protein_coding protein_coding MGP_CBAJ_T0045377.1 MGP_CBAJ_G0022947.1 mouse_genomes_project 17 22689783 22708033 + MGP_CBAJ_P0045377 Zfp758 protein_coding protein_coding MGP_CBAJ_T0010107.1 MGP_CBAJ_G0008245.1 mouse_genomes_project 17 102056015 102056076 + Gm27475 miRNA miRNA MGP_CBAJ_T0101741.1 MGP_CBAJ_G0039772.1 mouse_genomes_project 17 40127266 40127695 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0045968.1 MGP_CBAJ_G0023097.1 mouse_genomes_project 17 27457960 27458743 - MGP_CBAJ_P0045968 protein_coding protein_coding MGP_CBAJ_T0045970.1 MGP_CBAJ_G0023097.1 mouse_genomes_project 17 27458001 27458607 - protein_coding retained_intron MGP_CBAJ_T0048010.1 MGP_CBAJ_G0023676.1 mouse_genomes_project 17 73085475 73118971 - MGP_CBAJ_P0048010 Vapa protein_coding protein_coding MGP_CBAJ_T0013079.1 MGP_CBAJ_G0011191.1 mouse_genomes_project 17 40657658 40658325 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101754.1 MGP_CBAJ_G0039785.1 mouse_genomes_project 17 40984394 40985233 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0048011.1 MGP_CBAJ_G0023677.1 mouse_genomes_project 17 73149937 73154597 - MGP_CBAJ_P0048011 Txndc2 protein_coding protein_coding MGP_CBAJ_T0047429.1 MGP_CBAJ_G0023492.1 mouse_genomes_project 17 50295408 50303013 - MGP_CBAJ_P0047429 Tmem151b protein_coding protein_coding MGP_CBAJ_T0045823.1 MGP_CBAJ_G0023067.1 mouse_genomes_project 17 26849789 26851566 - MGP_CBAJ_P0045823 Fam173a protein_coding protein_coding MGP_CBAJ_T0047807.1 MGP_CBAJ_G0023586.1 mouse_genomes_project 17 58336958 58767882 + MGP_CBAJ_P0047807 Kcnh8 protein_coding protein_coding MGP_CBAJ_T0047808.1 MGP_CBAJ_G0023586.1 mouse_genomes_project 17 58733310 58767067 + Kcnh8 protein_coding retained_intron MGP_CBAJ_T0017283.1 MGP_CBAJ_G0015076.1 mouse_genomes_project 17 6331638 6388000 + T2 processed_transcript processed_transcript MGP_CBAJ_T0017284.1 MGP_CBAJ_G0015076.1 mouse_genomes_project 17 6356255 6388000 + T2 processed_transcript processed_transcript MGP_CBAJ_T0047357.1 MGP_CBAJ_G0023461.1 mouse_genomes_project 17 44935607 44940268 + MGP_CBAJ_P0047357 Esp1 protein_coding protein_coding MGP_CBAJ_T0006881.1 MGP_CBAJ_G0005655.1 mouse_genomes_project 17 79124782 79731207 + lincRNA lincRNA MGP_CBAJ_T0045985.1 MGP_CBAJ_G0023103.1 mouse_genomes_project 17 27902808 27930260 + MGP_CBAJ_P0045985 Atp6v0e protein_coding protein_coding MGP_CBAJ_T0045986.1 MGP_CBAJ_G0023103.1 mouse_genomes_project 17 27902824 27928567 + MGP_CBAJ_P0045986 Atp6v0e protein_coding protein_coding MGP_CBAJ_T0047274.1 MGP_CBAJ_G0023398.1 mouse_genomes_project 17 40491778 40507555 - MGP_CBAJ_P0047274 Mog protein_coding protein_coding MGP_CBAJ_T0047275.1 MGP_CBAJ_G0023398.1 mouse_genomes_project 17 40492540 40507356 - MGP_CBAJ_P0047275 Mog protein_coding protein_coding MGP_CBAJ_T0045193.1 MGP_CBAJ_G0022862.1 mouse_genomes_project 17 11874505 11875452 - MGP_CBAJ_P0045193 Gpr31b protein_coding protein_coding MGP_CBAJ_T0046239.1 MGP_CBAJ_G0023159.1 mouse_genomes_project 17 31018456 31032143 - MGP_CBAJ_P0046239 Ppil1 protein_coding protein_coding MGP_CBAJ_T0046240.1 MGP_CBAJ_G0023159.1 mouse_genomes_project 17 31018876 31024533 - Ppil1 protein_coding retained_intron MGP_CBAJ_T0046241.1 MGP_CBAJ_G0023159.1 mouse_genomes_project 17 31018915 31031899 - MGP_CBAJ_P0046241 Ppil1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046242.1 MGP_CBAJ_G0023159.1 mouse_genomes_project 17 31029086 31031925 - Ppil1 protein_coding processed_transcript MGP_CBAJ_T0100263.1 MGP_CBAJ_G0038518.1 mouse_genomes_project 17 80012462 80012540 + Snord53 snoRNA snoRNA MGP_CBAJ_T0010063.1 MGP_CBAJ_G0008201.1 mouse_genomes_project 17 27802534 27802660 - Gm22420 miRNA miRNA MGP_CBAJ_T0047314.1 MGP_CBAJ_G0023424.1 mouse_genomes_project 17 41244726 41246040 - MGP_CBAJ_P0047314 Olfr116 protein_coding protein_coding MGP_CBAJ_T0045476.1 MGP_CBAJ_G0022983.1 mouse_genomes_project 17 24745299 24752467 - MGP_CBAJ_P0045476 protein_coding protein_coding MGP_CBAJ_T0046435.1 MGP_CBAJ_G0023206.1 mouse_genomes_project 17 34906420 34932433 + MGP_CBAJ_P0046435 Cyp4f17 protein_coding protein_coding MGP_CBAJ_T0046436.1 MGP_CBAJ_G0023206.1 mouse_genomes_project 17 34906853 34932987 + MGP_CBAJ_P0046436 Cyp4f17 protein_coding unknown_likely_coding MGP_CBAJ_T0046439.1 MGP_CBAJ_G0023208.1 mouse_genomes_project 17 35130641 35150560 + MGP_CBAJ_P0046439 Cyp4f40 protein_coding protein_coding MGP_CBAJ_T0006806.1 MGP_CBAJ_G0005601.1 mouse_genomes_project 17 21644136 21651812 - 9330136K24Rik lincRNA lincRNA MGP_CBAJ_T0046700.1 MGP_CBAJ_G0023271.1 mouse_genomes_project 17 37015855 37027203 + MGP_CBAJ_P0046700 H2-Ab1 protein_coding protein_coding MGP_CBAJ_T0046701.1 MGP_CBAJ_G0023271.1 mouse_genomes_project 17 37024949 37025882 + H2-Ab1 protein_coding retained_intron MGP_CBAJ_T0046702.1 MGP_CBAJ_G0023271.1 mouse_genomes_project 17 37026064 37027179 + H2-Ab1 protein_coding retained_intron MGP_CBAJ_T0048293.1 MGP_CBAJ_G0023770.1 mouse_genomes_project 17 93048008 93060508 + MGP_CBAJ_P0048293 Pkdcc protein_coding protein_coding MGP_CBAJ_T0048294.1 MGP_CBAJ_G0023770.1 mouse_genomes_project 17 93052805 93054439 + Pkdcc protein_coding processed_transcript MGP_CBAJ_T0048295.1 MGP_CBAJ_G0023770.1 mouse_genomes_project 17 93052805 93059724 + MGP_CBAJ_P0048295 Pkdcc protein_coding protein_coding MGP_CBAJ_T0048296.1 MGP_CBAJ_G0023770.1 mouse_genomes_project 17 93053731 93060035 + Pkdcc protein_coding processed_transcript MGP_CBAJ_T0006894.1 MGP_CBAJ_G0005665.1 mouse_genomes_project 17 97983483 97998803 + Gm28676 lincRNA lincRNA MGP_CBAJ_T0048177.1 MGP_CBAJ_G0023724.1 mouse_genomes_project 17 83077426 83142045 + MGP_CBAJ_P0048177 Spast protein_coding protein_coding MGP_CBAJ_T0013045.1 MGP_CBAJ_G0011157.1 mouse_genomes_project 17 14510457 14511802 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006870.1 MGP_CBAJ_G0005649.1 mouse_genomes_project 17 66769142 66933809 - Gm29051 lincRNA lincRNA MGP_CBAJ_T0046802.1 MGP_CBAJ_G0023295.1 mouse_genomes_project 17 37797724 37799862 + MGP_CBAJ_P0046802 Dxo protein_coding protein_coding MGP_CBAJ_T0046803.1 MGP_CBAJ_G0023295.1 mouse_genomes_project 17 37797724 37799909 + MGP_CBAJ_P0046803 Dxo protein_coding protein_coding MGP_CBAJ_T0046804.1 MGP_CBAJ_G0023295.1 mouse_genomes_project 17 37797724 37799324 + MGP_CBAJ_P0046804 Dxo protein_coding protein_coding MGP_CBAJ_T0046805.1 MGP_CBAJ_G0023295.1 mouse_genomes_project 17 37797787 37799065 + Dxo protein_coding retained_intron MGP_CBAJ_T0046806.1 MGP_CBAJ_G0023295.1 mouse_genomes_project 17 37797953 37798683 + MGP_CBAJ_P0046806 Dxo protein_coding protein_coding MGP_CBAJ_T0046807.1 MGP_CBAJ_G0023295.1 mouse_genomes_project 17 37798104 37799813 + MGP_CBAJ_P0046807 Dxo protein_coding protein_coding MGP_CBAJ_T0046808.1 MGP_CBAJ_G0023295.1 mouse_genomes_project 17 37798362 37799814 + MGP_CBAJ_P0046808 Dxo protein_coding nonsense_mediated_decay MGP_CBAJ_T0046809.1 MGP_CBAJ_G0023295.1 mouse_genomes_project 17 37798698 37799359 + MGP_CBAJ_P0046809 Dxo protein_coding nonsense_mediated_decay MGP_CBAJ_T0046810.1 MGP_CBAJ_G0023295.1 mouse_genomes_project 17 37799000 37799813 + MGP_CBAJ_P0046810 Dxo protein_coding nonsense_mediated_decay MGP_CBAJ_T0046811.1 MGP_CBAJ_G0023295.1 mouse_genomes_project 17 37799029 37799813 + MGP_CBAJ_P0046811 Dxo protein_coding protein_coding MGP_CBAJ_T0046812.1 MGP_CBAJ_G0023295.1 mouse_genomes_project 17 37799149 37799799 + MGP_CBAJ_P0046812 Dxo protein_coding protein_coding MGP_CBAJ_T0045192.1 MGP_CBAJ_G0022861.1 mouse_genomes_project 17 11523368 11533559 + MGP_CBAJ_P0045192 Sod2 protein_coding protein_coding MGP_CBAJ_T0097786.1 MGP_CBAJ_G0036059.1 mouse_genomes_project 17 41180009 41189374 - pseudogene pseudogene MGP_CBAJ_T0047351.1 MGP_CBAJ_G0023455.1 mouse_genomes_project 17 44313451 44334068 - MGP_CBAJ_P0047351 Crisp3 protein_coding protein_coding MGP_CBAJ_T0010103.1 MGP_CBAJ_G0008241.1 mouse_genomes_project 17 79099933 79100031 - Mir1195 miRNA miRNA MGP_CBAJ_T0006895.1 MGP_CBAJ_G0005666.1 mouse_genomes_project 17 98803561 98819098 - Gm26612 lincRNA lincRNA MGP_CBAJ_T0003695.1 MGP_CBAJ_G0003323.1 mouse_genomes_project 17 50346856 50349104 + Gm17080 antisense antisense MGP_CBAJ_T0046575.1 MGP_CBAJ_G0023245.1 mouse_genomes_project 17 36547515 36551967 + MGP_CBAJ_P0046575 Tapbp protein_coding protein_coding MGP_CBAJ_T0046578.1 MGP_CBAJ_G0023245.1 mouse_genomes_project 17 36550883 36560830 + MGP_CBAJ_P0046578 Tapbp protein_coding protein_coding MGP_CBAJ_T0046579.1 MGP_CBAJ_G0023245.1 mouse_genomes_project 17 36551063 36551927 + Tapbp protein_coding retained_intron MGP_CBAJ_T0046580.1 MGP_CBAJ_G0023245.1 mouse_genomes_project 17 36552079 36557743 + Tapbp protein_coding processed_transcript MGP_CBAJ_T0046581.1 MGP_CBAJ_G0023245.1 mouse_genomes_project 17 36557663 36559819 + Tapbp protein_coding retained_intron MGP_CBAJ_T0013075.1 MGP_CBAJ_G0011187.1 mouse_genomes_project 17 39886192 39886560 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0045315.1 MGP_CBAJ_G0022909.1 mouse_genomes_project 17 20336832 20379341 + MGP_CBAJ_P0045315 protein_coding protein_coding MGP_CBAJ_T0047302.1 MGP_CBAJ_G0023414.1 mouse_genomes_project 17 41007332 41008367 + MGP_CBAJ_P0047302 Olfr107 protein_coding protein_coding MGP_CBAJ_T0047427.1 MGP_CBAJ_G0023490.1 mouse_genomes_project 17 50254024 50271701 + MGP_CBAJ_P0047427 Aars2 protein_coding protein_coding MGP_CBAJ_T0047924.1 MGP_CBAJ_G0023631.1 mouse_genomes_project 17 62950364 62963065 - MGP_CBAJ_P0047924 Lonp1 protein_coding protein_coding MGP_CBAJ_T0045394.1 MGP_CBAJ_G0022954.1 mouse_genomes_project 17 23927353 23954921 + MGP_CBAJ_P0045394 Vmn2r115 protein_coding protein_coding MGP_CBAJ_T0045428.1 MGP_CBAJ_G0022966.1 mouse_genomes_project 17 24389826 24391261 - MGP_CBAJ_P0045428 Cldn9 protein_coding protein_coding MGP_CBAJ_T0045602.1 MGP_CBAJ_G0023015.1 mouse_genomes_project 17 25603960 25606377 - MGP_CBAJ_P0045602 Gfer protein_coding protein_coding MGP_CBAJ_T0101725.1 MGP_CBAJ_G0039756.1 mouse_genomes_project 17 39444477 39479597 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047569.1 MGP_CBAJ_G0023521.1 mouse_genomes_project 17 51389181 51389681 - Cul9 protein_coding retained_intron MGP_CBAJ_T0047570.1 MGP_CBAJ_G0023521.1 mouse_genomes_project 17 51389214 51447522 - MGP_CBAJ_P0047570 Cul9 protein_coding protein_coding MGP_CBAJ_T0047571.1 MGP_CBAJ_G0023521.1 mouse_genomes_project 17 51389219 51408975 - Cul9 protein_coding retained_intron MGP_CBAJ_T0047572.1 MGP_CBAJ_G0023521.1 mouse_genomes_project 17 51389225 51447435 - Cul9 protein_coding retained_intron MGP_CBAJ_T0047573.1 MGP_CBAJ_G0023521.1 mouse_genomes_project 17 51390406 51414065 - Cul9 protein_coding retained_intron MGP_CBAJ_T0047574.1 MGP_CBAJ_G0023521.1 mouse_genomes_project 17 51406706 51410950 - Cul9 protein_coding retained_intron MGP_CBAJ_T0047575.1 MGP_CBAJ_G0023521.1 mouse_genomes_project 17 51407769 51408881 - Cul9 protein_coding retained_intron MGP_CBAJ_T0047576.1 MGP_CBAJ_G0023521.1 mouse_genomes_project 17 51407769 51413423 - Cul9 protein_coding retained_intron MGP_CBAJ_T0047577.1 MGP_CBAJ_G0023521.1 mouse_genomes_project 17 51418988 51438965 - Cul9 protein_coding retained_intron MGP_CBAJ_T0047578.1 MGP_CBAJ_G0023521.1 mouse_genomes_project 17 51420194 51439225 - Cul9 protein_coding retained_intron MGP_CBAJ_T0046690.1 MGP_CBAJ_G0023268.1 mouse_genomes_project 17 36956275 36971432 + MGP_CBAJ_P0046690 Tap2 protein_coding protein_coding MGP_CBAJ_T0046691.1 MGP_CBAJ_G0023268.1 mouse_genomes_project 17 36956829 36958089 + MGP_CBAJ_P0046691 Tap2 protein_coding protein_coding MGP_CBAJ_T0046692.1 MGP_CBAJ_G0023268.1 mouse_genomes_project 17 36957295 36971429 + Tap2 protein_coding retained_intron MGP_CBAJ_T0046693.1 MGP_CBAJ_G0023268.1 mouse_genomes_project 17 36957828 36958288 + MGP_CBAJ_P0046693 Tap2 protein_coding protein_coding MGP_CBAJ_T0046694.1 MGP_CBAJ_G0023268.1 mouse_genomes_project 17 36962745 36964275 + Tap2 protein_coding processed_transcript MGP_CBAJ_T0099018.1 MGP_CBAJ_G0037273.1 mouse_genomes_project 17 99044296 99044391 - Gm22542 snRNA snRNA MGP_CBAJ_T0045325.1 MGP_CBAJ_G0022919.1 mouse_genomes_project 17 20925176 20926112 - MGP_CBAJ_P0045325 protein_coding protein_coding MGP_CBAJ_T0047786.1 MGP_CBAJ_G0023581.1 mouse_genomes_project 17 55471608 55688035 - MGP_CBAJ_P0047786 Rftn1 protein_coding protein_coding MGP_CBAJ_T0047787.1 MGP_CBAJ_G0023581.1 mouse_genomes_project 17 55517421 55688236 - Rftn1 protein_coding retained_intron MGP_CBAJ_T0047234.1 MGP_CBAJ_G0023389.1 mouse_genomes_project 17 40345320 40353795 - MGP_CBAJ_P0047234 Trim40 protein_coding protein_coding MGP_CBAJ_T0047235.1 MGP_CBAJ_G0023389.1 mouse_genomes_project 17 40345567 40353262 - MGP_CBAJ_P0047235 Trim40 protein_coding protein_coding MGP_CBAJ_T0047236.1 MGP_CBAJ_G0023389.1 mouse_genomes_project 17 40346660 40353873 - Trim40 protein_coding retained_intron MGP_CBAJ_T0047237.1 MGP_CBAJ_G0023389.1 mouse_genomes_project 17 40352993 40353862 - Trim40 protein_coding processed_transcript MGP_CBAJ_T0046369.1 MGP_CBAJ_G0023191.1 mouse_genomes_project 17 33892907 33919722 - MGP_CBAJ_P0046369 Cbs protein_coding protein_coding MGP_CBAJ_T0046370.1 MGP_CBAJ_G0023191.1 mouse_genomes_project 17 33892924 33919688 - MGP_CBAJ_P0046370 Cbs protein_coding protein_coding MGP_CBAJ_T0046371.1 MGP_CBAJ_G0023191.1 mouse_genomes_project 17 33892925 33919688 - MGP_CBAJ_P0046371 Cbs protein_coding protein_coding MGP_CBAJ_T0046372.1 MGP_CBAJ_G0023191.1 mouse_genomes_project 17 33897449 33898158 - Cbs protein_coding retained_intron MGP_CBAJ_T0046373.1 MGP_CBAJ_G0023191.1 mouse_genomes_project 17 33903947 33909149 - Cbs protein_coding processed_transcript MGP_CBAJ_T0046374.1 MGP_CBAJ_G0023191.1 mouse_genomes_project 17 33904472 33906060 - Cbs protein_coding processed_transcript MGP_CBAJ_T0046375.1 MGP_CBAJ_G0023191.1 mouse_genomes_project 17 33908074 33919313 - MGP_CBAJ_P0046375 Cbs protein_coding protein_coding MGP_CBAJ_T0046376.1 MGP_CBAJ_G0023191.1 mouse_genomes_project 17 33908128 33919172 - MGP_CBAJ_P0046376 Cbs protein_coding protein_coding MGP_CBAJ_T0046377.1 MGP_CBAJ_G0023191.1 mouse_genomes_project 17 33910491 33919172 - MGP_CBAJ_P0046377 Cbs protein_coding protein_coding MGP_CBAJ_T0048251.1 MGP_CBAJ_G0023748.1 mouse_genomes_project 17 89051981 89120637 + MGP_CBAJ_P0048251 Rmdn2 protein_coding protein_coding MGP_CBAJ_T0048252.1 MGP_CBAJ_G0023748.1 mouse_genomes_project 17 89058402 89120171 + MGP_CBAJ_P0048252 Rmdn2 protein_coding unknown_likely_coding MGP_CBAJ_T0046543.1 MGP_CBAJ_G0023240.1 mouse_genomes_project 17 36403749 36409211 - MGP_CBAJ_P0046543 Rps28 protein_coding protein_coding MGP_CBAJ_T0046546.1 MGP_CBAJ_G0023240.1 mouse_genomes_project 17 36407757 36409281 - MGP_CBAJ_P0046546 Rps28 protein_coding protein_coding MGP_CBAJ_T0046547.1 MGP_CBAJ_G0023240.1 mouse_genomes_project 17 36407758 36409065 - MGP_CBAJ_P0046547 Rps28 protein_coding protein_coding MGP_CBAJ_T0046548.1 MGP_CBAJ_G0023240.1 mouse_genomes_project 17 36407771 36409184 - Rps28 protein_coding processed_transcript MGP_CBAJ_T0046549.1 MGP_CBAJ_G0023240.1 mouse_genomes_project 17 36407771 36409281 - MGP_CBAJ_P0046549 Rps28 protein_coding protein_coding MGP_CBAJ_T0046550.1 MGP_CBAJ_G0023240.1 mouse_genomes_project 17 36407773 36409195 - MGP_CBAJ_P0046550 Rps28 protein_coding protein_coding MGP_CBAJ_T0046551.1 MGP_CBAJ_G0023240.1 mouse_genomes_project 17 36408307 36409203 - Rps28 protein_coding retained_intron MGP_CBAJ_T0047593.1 MGP_CBAJ_G0023527.1 mouse_genomes_project 17 51590290 51597089 - MGP_CBAJ_P0047593 Rrp36 protein_coding protein_coding MGP_CBAJ_T0047597.1 MGP_CBAJ_G0023530.1 mouse_genomes_project 17 51611988 51636468 - MGP_CBAJ_P0047597 Ppp2r5d protein_coding protein_coding MGP_CBAJ_T0048133.1 MGP_CBAJ_G0023705.1 mouse_genomes_project 17 79660740 79819977 - MGP_CBAJ_P0048133 Smchd1 protein_coding protein_coding MGP_CBAJ_T0048134.1 MGP_CBAJ_G0023705.1 mouse_genomes_project 17 79661913 79664408 - Smchd1 protein_coding retained_intron MGP_CBAJ_T0048135.1 MGP_CBAJ_G0023705.1 mouse_genomes_project 17 79664321 79678718 - Smchd1 protein_coding retained_intron MGP_CBAJ_T0048136.1 MGP_CBAJ_G0023705.1 mouse_genomes_project 17 79666305 79668808 - Smchd1 protein_coding retained_intron MGP_CBAJ_T0048137.1 MGP_CBAJ_G0023705.1 mouse_genomes_project 17 79672561 79677966 - Smchd1 protein_coding retained_intron MGP_CBAJ_T0048138.1 MGP_CBAJ_G0023705.1 mouse_genomes_project 17 79706959 79708206 - Smchd1 protein_coding retained_intron MGP_CBAJ_T0048139.1 MGP_CBAJ_G0023705.1 mouse_genomes_project 17 79731826 79732641 - Smchd1 protein_coding retained_intron MGP_CBAJ_T0048143.1 MGP_CBAJ_G0023705.1 mouse_genomes_project 17 79817020 79820141 - Smchd1 protein_coding retained_intron MGP_CBAJ_T0101691.1 MGP_CBAJ_G0039722.1 mouse_genomes_project 17 19922775 19923706 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047325.1 MGP_CBAJ_G0023435.1 mouse_genomes_project 17 41602003 41606198 - MGP_CBAJ_P0047325 Olfr761 protein_coding protein_coding MGP_CBAJ_T0045487.1 MGP_CBAJ_G0022989.1 mouse_genomes_project 17 24879826 24958432 - MGP_CBAJ_P0045487 Pdpk1 protein_coding protein_coding MGP_CBAJ_T0045488.1 MGP_CBAJ_G0022989.1 mouse_genomes_project 17 24879834 24958525 - MGP_CBAJ_P0045488 Pdpk1 protein_coding protein_coding MGP_CBAJ_T0045489.1 MGP_CBAJ_G0022989.1 mouse_genomes_project 17 24881963 24958542 - MGP_CBAJ_P0045489 Pdpk1 protein_coding protein_coding MGP_CBAJ_T0045490.1 MGP_CBAJ_G0022989.1 mouse_genomes_project 17 24894288 24899710 - Pdpk1 protein_coding processed_transcript MGP_CBAJ_T0045491.1 MGP_CBAJ_G0022989.1 mouse_genomes_project 17 24897683 24975848 - Pdpk1 protein_coding processed_transcript MGP_CBAJ_T0045492.1 MGP_CBAJ_G0022989.1 mouse_genomes_project 17 24912519 24958528 - Pdpk1 protein_coding retained_intron MGP_CBAJ_T0045493.1 MGP_CBAJ_G0022989.1 mouse_genomes_project 17 24918227 24957778 - MGP_CBAJ_P0045493 Pdpk1 protein_coding protein_coding MGP_CBAJ_T0045494.1 MGP_CBAJ_G0022989.1 mouse_genomes_project 17 24918279 24932244 - MGP_CBAJ_P0045494 Pdpk1 protein_coding protein_coding MGP_CBAJ_T0045495.1 MGP_CBAJ_G0022989.1 mouse_genomes_project 17 24922360 24958100 - MGP_CBAJ_P0045495 Pdpk1 protein_coding protein_coding MGP_CBAJ_T0010075.1 MGP_CBAJ_G0008213.1 mouse_genomes_project 17 33162160 33162258 + Gm24026 miRNA miRNA MGP_CBAJ_T0013113.1 MGP_CBAJ_G0011225.1 mouse_genomes_project 17 70620146 70620637 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101687.1 MGP_CBAJ_G0039718.1 mouse_genomes_project 17 19285915 19287113 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047922.1 MGP_CBAJ_G0023629.1 mouse_genomes_project 17 62942890 62945210 - MGP_CBAJ_P0047922 2410015M20Rik protein_coding protein_coding MGP_CBAJ_T0006824.1 MGP_CBAJ_G0005616.1 mouse_genomes_project 17 30736161 30737267 + Gm16195 lincRNA lincRNA MGP_CBAJ_T0045620.1 MGP_CBAJ_G0023020.1 mouse_genomes_project 17 25642594 25643184 - Ndufb10 protein_coding retained_intron MGP_CBAJ_T0045621.1 MGP_CBAJ_G0023020.1 mouse_genomes_project 17 25642594 25643441 - Ndufb10 protein_coding retained_intron MGP_CBAJ_T0045622.1 MGP_CBAJ_G0023020.1 mouse_genomes_project 17 25642594 25644951 - Ndufb10 protein_coding retained_intron MGP_CBAJ_T0045623.1 MGP_CBAJ_G0023020.1 mouse_genomes_project 17 25642594 25645009 - MGP_CBAJ_P0045623 Ndufb10 protein_coding protein_coding MGP_CBAJ_T0045624.1 MGP_CBAJ_G0023020.1 mouse_genomes_project 17 25642939 25644943 - MGP_CBAJ_P0045624 Ndufb10 protein_coding protein_coding MGP_CBAJ_T0045625.1 MGP_CBAJ_G0023020.1 mouse_genomes_project 17 25643216 25644925 - Ndufb10 protein_coding processed_transcript MGP_CBAJ_T0048358.1 MGP_CBAJ_G0023798.1 mouse_genomes_project 17 97526991 97556875 + MGP_CBAJ_P0048358 Socs5 protein_coding protein_coding MGP_CBAJ_T0003675.1 MGP_CBAJ_G0003307.1 mouse_genomes_project 17 36754160 36771411 - BC051537 antisense antisense MGP_CBAJ_T0099001.1 MGP_CBAJ_G0037256.1 mouse_genomes_project 17 52974976 52975146 - Gm25201 snRNA snRNA MGP_CBAJ_T0045464.1 MGP_CBAJ_G0022978.1 mouse_genomes_project 17 24607081 24612110 + MGP_CBAJ_P0045464 Prss21 protein_coding protein_coding MGP_CBAJ_T0006858.1 MGP_CBAJ_G0005643.1 mouse_genomes_project 17 53073146 53078184 + lincRNA lincRNA MGP_CBAJ_T0045072.1 MGP_CBAJ_G0022824.1 mouse_genomes_project 17 5114372 5142563 - MGP_CBAJ_P0045072 protein_coding protein_coding MGP_CBAJ_T0048390.1 MGP_CBAJ_G0023806.1 mouse_genomes_project 17 98594386 98614107 + MGP_CBAJ_P0048390 Msh6 protein_coding protein_coding MGP_CBAJ_T0047523.1 MGP_CBAJ_G0023509.1 mouse_genomes_project 17 51101473 51105608 - MGP_CBAJ_P0047523 Polr1c protein_coding protein_coding MGP_CBAJ_T0047524.1 MGP_CBAJ_G0023509.1 mouse_genomes_project 17 51101654 51104127 - MGP_CBAJ_P0047524 Polr1c protein_coding protein_coding MGP_CBAJ_T0047525.1 MGP_CBAJ_G0023509.1 mouse_genomes_project 17 51102077 51105486 - Polr1c protein_coding retained_intron MGP_CBAJ_T0047526.1 MGP_CBAJ_G0023509.1 mouse_genomes_project 17 51102166 51105522 - MGP_CBAJ_P0047526 Polr1c protein_coding protein_coding MGP_CBAJ_T0047527.1 MGP_CBAJ_G0023509.1 mouse_genomes_project 17 51102388 51105522 - MGP_CBAJ_P0047527 Polr1c protein_coding protein_coding MGP_CBAJ_T0047528.1 MGP_CBAJ_G0023509.1 mouse_genomes_project 17 51102486 51105522 - MGP_CBAJ_P0047528 Polr1c protein_coding nonsense_mediated_decay MGP_CBAJ_T0047529.1 MGP_CBAJ_G0023509.1 mouse_genomes_project 17 51102815 51105521 - Polr1c protein_coding retained_intron MGP_CBAJ_T0047530.1 MGP_CBAJ_G0023509.1 mouse_genomes_project 17 51104852 51105522 - Polr1c protein_coding retained_intron MGP_CBAJ_T0101700.1 MGP_CBAJ_G0039731.1 mouse_genomes_project 17 21168409 21168865 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0046395.1 MGP_CBAJ_G0023197.1 mouse_genomes_project 17 34463487 34515507 - MGP_CBAJ_P0046395 Notch3 protein_coding protein_coding MGP_CBAJ_T0048012.1 MGP_CBAJ_G0023678.1 mouse_genomes_project 17 73164120 73300357 - MGP_CBAJ_P0048012 Rab31 protein_coding protein_coding MGP_CBAJ_T0046202.1 MGP_CBAJ_G0023152.1 mouse_genomes_project 17 30649587 30662060 + MGP_CBAJ_P0046202 Kctd20 protein_coding protein_coding MGP_CBAJ_T0046203.1 MGP_CBAJ_G0023152.1 mouse_genomes_project 17 30650073 30667475 + MGP_CBAJ_P0046203 Kctd20 protein_coding protein_coding MGP_CBAJ_T0046204.1 MGP_CBAJ_G0023152.1 mouse_genomes_project 17 30650103 30665869 + MGP_CBAJ_P0046204 Kctd20 protein_coding protein_coding MGP_CBAJ_T0046205.1 MGP_CBAJ_G0023152.1 mouse_genomes_project 17 30650140 30665032 + Kctd20 protein_coding processed_transcript MGP_CBAJ_T0046206.1 MGP_CBAJ_G0023152.1 mouse_genomes_project 17 30650236 30665869 + MGP_CBAJ_P0046206 Kctd20 protein_coding protein_coding MGP_CBAJ_T0046207.1 MGP_CBAJ_G0023152.1 mouse_genomes_project 17 30650325 30663019 + MGP_CBAJ_P0046207 Kctd20 protein_coding protein_coding MGP_CBAJ_T0046208.1 MGP_CBAJ_G0023152.1 mouse_genomes_project 17 30650853 30665877 + MGP_CBAJ_P0046208 Kctd20 protein_coding protein_coding MGP_CBAJ_T0046209.1 MGP_CBAJ_G0023152.1 mouse_genomes_project 17 30650853 30665875 + MGP_CBAJ_P0046209 Kctd20 protein_coding protein_coding MGP_CBAJ_T0048232.1 MGP_CBAJ_G0023741.1 mouse_genomes_project 17 88234050 88258547 - MGP_CBAJ_P0048232 Sult6b1 protein_coding protein_coding MGP_CBAJ_T0048233.1 MGP_CBAJ_G0023741.1 mouse_genomes_project 17 88235009 88246654 - Sult6b1 protein_coding processed_transcript MGP_CBAJ_T0048234.1 MGP_CBAJ_G0023741.1 mouse_genomes_project 17 88235178 88258454 - MGP_CBAJ_P0048234 Sult6b1 protein_coding protein_coding MGP_CBAJ_T0048235.1 MGP_CBAJ_G0023741.1 mouse_genomes_project 17 88235178 88258454 - MGP_CBAJ_P0048235 Sult6b1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0013072.1 MGP_CBAJ_G0011184.1 mouse_genomes_project 17 39609268 39609826 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0045780.1 MGP_CBAJ_G0023055.1 mouse_genomes_project 17 26491018 26496021 + MGP_CBAJ_P0045780 Tekt4 protein_coding protein_coding MGP_CBAJ_T0006856.1 MGP_CBAJ_G0005641.1 mouse_genomes_project 17 51130940 51137435 + Gm26785 lincRNA lincRNA MGP_CBAJ_T0045831.1 MGP_CBAJ_G0023071.1 mouse_genomes_project 17 26890936 26893910 + MGP_CBAJ_P0045831 Jmjd8 protein_coding protein_coding MGP_CBAJ_T0045832.1 MGP_CBAJ_G0023071.1 mouse_genomes_project 17 26891112 26893912 + MGP_CBAJ_P0045832 Jmjd8 protein_coding protein_coding MGP_CBAJ_T0045833.1 MGP_CBAJ_G0023071.1 mouse_genomes_project 17 26891133 26892220 + Jmjd8 protein_coding retained_intron MGP_CBAJ_T0045834.1 MGP_CBAJ_G0023071.1 mouse_genomes_project 17 26891140 26892695 + MGP_CBAJ_P0045834 Jmjd8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045835.1 MGP_CBAJ_G0023071.1 mouse_genomes_project 17 26891189 26892703 + MGP_CBAJ_P0045835 Jmjd8 protein_coding protein_coding MGP_CBAJ_T0045836.1 MGP_CBAJ_G0023071.1 mouse_genomes_project 17 26891190 26892431 + Jmjd8 protein_coding retained_intron MGP_CBAJ_T0045837.1 MGP_CBAJ_G0023071.1 mouse_genomes_project 17 26891366 26892596 + Jmjd8 protein_coding retained_intron MGP_CBAJ_T0045838.1 MGP_CBAJ_G0023071.1 mouse_genomes_project 17 26891908 26892791 + Jmjd8 protein_coding retained_intron MGP_CBAJ_T0045760.1 MGP_CBAJ_G0023050.1 mouse_genomes_project 17 26299841 26306770 + MGP_CBAJ_P0045760 Prss29 protein_coding protein_coding MGP_CBAJ_T0045070.1 MGP_CBAJ_G0022822.1 mouse_genomes_project 17 5095329 5097122 - MGP_CBAJ_P0045070 Ttll2 protein_coding protein_coding MGP_CBAJ_T0046997.1 MGP_CBAJ_G0023334.1 mouse_genomes_project 17 38210273 38212418 - MGP_CBAJ_P0046997 Lta protein_coding protein_coding MGP_CBAJ_T0006879.1 MGP_CBAJ_G0005654.1 mouse_genomes_project 17 79118282 79119859 - Gm26510 lincRNA lincRNA MGP_CBAJ_T0006880.1 MGP_CBAJ_G0005654.1 mouse_genomes_project 17 79118285 79182704 - Gm26510 lincRNA lincRNA MGP_CBAJ_T0048213.1 MGP_CBAJ_G0023731.1 mouse_genomes_project 17 84331715 84423266 + MGP_CBAJ_P0048213 Rasgrp3 protein_coding protein_coding MGP_CBAJ_T0048214.1 MGP_CBAJ_G0023731.1 mouse_genomes_project 17 84348267 84423266 + MGP_CBAJ_P0048214 Rasgrp3 protein_coding protein_coding MGP_CBAJ_T0047769.1 MGP_CBAJ_G0023577.1 mouse_genomes_project 17 54254873 54453389 + MGP_CBAJ_P0047769 Lrfn2 protein_coding protein_coding MGP_CBAJ_T0047966.1 MGP_CBAJ_G0023657.1 mouse_genomes_project 17 63645023 63649721 - MGP_CBAJ_P0047966 Tnfsf14 protein_coding protein_coding MGP_CBAJ_T0100249.1 MGP_CBAJ_G0038504.1 mouse_genomes_project 17 31884364 31884472 - Gm22327 snoRNA snoRNA MGP_CBAJ_T0047026.1 MGP_CBAJ_G0023344.1 mouse_genomes_project 17 38683562 38688090 + MGP_CBAJ_P0047026 Pou5f1 protein_coding protein_coding MGP_CBAJ_T0047027.1 MGP_CBAJ_G0023344.1 mouse_genomes_project 17 38685029 38687461 + MGP_CBAJ_P0047027 Pou5f1 protein_coding protein_coding MGP_CBAJ_T0047028.1 MGP_CBAJ_G0023344.1 mouse_genomes_project 17 38686132 38687461 + MGP_CBAJ_P0047028 Pou5f1 protein_coding protein_coding MGP_CBAJ_T0047029.1 MGP_CBAJ_G0023344.1 mouse_genomes_project 17 38686134 38687461 + MGP_CBAJ_P0047029 Pou5f1 protein_coding protein_coding MGP_CBAJ_T0047030.1 MGP_CBAJ_G0023344.1 mouse_genomes_project 17 38686144 38687461 + MGP_CBAJ_P0047030 Pou5f1 protein_coding protein_coding MGP_CBAJ_T0047031.1 MGP_CBAJ_G0023344.1 mouse_genomes_project 17 38686148 38687461 + MGP_CBAJ_P0047031 Pou5f1 protein_coding protein_coding MGP_CBAJ_T0099009.1 MGP_CBAJ_G0037264.1 mouse_genomes_project 17 80948599 80948729 - Gm24736 snRNA snRNA MGP_CBAJ_T0046334.1 MGP_CBAJ_G0023187.1 mouse_genomes_project 17 33635563 33728028 + MGP_CBAJ_P0046334 Pde9a protein_coding protein_coding MGP_CBAJ_T0046335.1 MGP_CBAJ_G0023187.1 mouse_genomes_project 17 33635578 33727874 + MGP_CBAJ_P0046335 Pde9a protein_coding nonsense_mediated_decay MGP_CBAJ_T0046336.1 MGP_CBAJ_G0023187.1 mouse_genomes_project 17 33635578 33727874 + MGP_CBAJ_P0046336 Pde9a protein_coding protein_coding MGP_CBAJ_T0046337.1 MGP_CBAJ_G0023187.1 mouse_genomes_project 17 33635578 33727874 + MGP_CBAJ_P0046337 Pde9a protein_coding nonsense_mediated_decay MGP_CBAJ_T0046338.1 MGP_CBAJ_G0023187.1 mouse_genomes_project 17 33635583 33727877 + MGP_CBAJ_P0046338 Pde9a protein_coding protein_coding MGP_CBAJ_T0046339.1 MGP_CBAJ_G0023187.1 mouse_genomes_project 17 33635591 33727799 + MGP_CBAJ_P0046339 Pde9a protein_coding nonsense_mediated_decay MGP_CBAJ_T0046340.1 MGP_CBAJ_G0023187.1 mouse_genomes_project 17 33635603 33727877 + MGP_CBAJ_P0046340 Pde9a protein_coding nonsense_mediated_decay MGP_CBAJ_T0046341.1 MGP_CBAJ_G0023187.1 mouse_genomes_project 17 33635605 33723911 + Pde9a protein_coding retained_intron MGP_CBAJ_T0046342.1 MGP_CBAJ_G0023187.1 mouse_genomes_project 17 33635623 33707292 + MGP_CBAJ_P0046342 Pde9a protein_coding nonsense_mediated_decay MGP_CBAJ_T0046343.1 MGP_CBAJ_G0023187.1 mouse_genomes_project 17 33683245 33711303 + MGP_CBAJ_P0046343 Pde9a protein_coding protein_coding MGP_CBAJ_T0046344.1 MGP_CBAJ_G0023187.1 mouse_genomes_project 17 33692302 33712365 + Pde9a protein_coding retained_intron MGP_CBAJ_T0046345.1 MGP_CBAJ_G0023187.1 mouse_genomes_project 17 33705496 33713875 + Pde9a protein_coding retained_intron MGP_CBAJ_T0046346.1 MGP_CBAJ_G0023187.1 mouse_genomes_project 17 33713802 33727859 + MGP_CBAJ_P0046346 Pde9a protein_coding protein_coding MGP_CBAJ_T0046347.1 MGP_CBAJ_G0023187.1 mouse_genomes_project 17 33723156 33727824 + Pde9a protein_coding processed_transcript MGP_CBAJ_T0013046.1 MGP_CBAJ_G0011158.1 mouse_genomes_project 17 22144266 22144714 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101749.1 MGP_CBAJ_G0039780.1 mouse_genomes_project 17 40840849 40842306 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0045907.1 MGP_CBAJ_G0023083.1 mouse_genomes_project 17 27040393 27046598 - MGP_CBAJ_P0045907 A930017K11Rik protein_coding protein_coding MGP_CBAJ_T0006815.1 MGP_CBAJ_G0005608.1 mouse_genomes_project 17 28118276 28149799 - Gm17382 lincRNA lincRNA MGP_CBAJ_T0097787.1 MGP_CBAJ_G0036060.1 mouse_genomes_project 17 41231083 41232048 - pseudogene pseudogene MGP_CBAJ_T0046002.1 MGP_CBAJ_G0023107.1 mouse_genomes_project 17 28215413 28220177 + MGP_CBAJ_P0046002 Phf1 protein_coding protein_coding MGP_CBAJ_T0047210.1 MGP_CBAJ_G0023378.1 mouse_genomes_project 17 39685712 39687773 - MGP_CBAJ_P0047210 H2-M10.2 protein_coding protein_coding MGP_CBAJ_T0006818.1 MGP_CBAJ_G0005611.1 mouse_genomes_project 17 28701806 28704172 + Gm10505 lincRNA lincRNA MGP_CBAJ_T0045634.1 MGP_CBAJ_G0023025.1 mouse_genomes_project 17 25778697 25780103 - MGP_CBAJ_P0045634 Fahd1 protein_coding protein_coding MGP_CBAJ_T0047617.1 MGP_CBAJ_G0023541.1 mouse_genomes_project 17 51916884 52006250 - MGP_CBAJ_P0047617 Ubr2 protein_coding protein_coding MGP_CBAJ_T0047618.1 MGP_CBAJ_G0023541.1 mouse_genomes_project 17 51916884 52006250 - MGP_CBAJ_P0047618 Ubr2 protein_coding protein_coding MGP_CBAJ_T0047853.1 MGP_CBAJ_G0023611.1 mouse_genomes_project 17 62286867 62294851 - MGP_CBAJ_P0047853 Ubxn6 protein_coding protein_coding MGP_CBAJ_T0047854.1 MGP_CBAJ_G0023611.1 mouse_genomes_project 17 62288072 62294840 - Ubxn6 protein_coding retained_intron MGP_CBAJ_T0047855.1 MGP_CBAJ_G0023611.1 mouse_genomes_project 17 62288072 62292055 - Ubxn6 protein_coding retained_intron MGP_CBAJ_T0047856.1 MGP_CBAJ_G0023611.1 mouse_genomes_project 17 62288358 62289257 - Ubxn6 protein_coding retained_intron MGP_CBAJ_T0047857.1 MGP_CBAJ_G0023611.1 mouse_genomes_project 17 62289460 62292263 - Ubxn6 protein_coding processed_transcript MGP_CBAJ_T0047858.1 MGP_CBAJ_G0023611.1 mouse_genomes_project 17 62289940 62294671 - Ubxn6 protein_coding retained_intron MGP_CBAJ_T0047859.1 MGP_CBAJ_G0023611.1 mouse_genomes_project 17 62290466 62294370 - MGP_CBAJ_P0047859 Ubxn6 protein_coding protein_coding MGP_CBAJ_T0003663.1 MGP_CBAJ_G0003301.1 mouse_genomes_project 17 31417841 31437900 - Tbc1d22bos antisense antisense MGP_CBAJ_T0003664.1 MGP_CBAJ_G0003301.1 mouse_genomes_project 17 31429442 31437874 - Tbc1d22bos antisense antisense MGP_CBAJ_T0013066.1 MGP_CBAJ_G0011178.1 mouse_genomes_project 17 39200073 39200400 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0045761.1 MGP_CBAJ_G0023051.1 mouse_genomes_project 17 26324794 26327077 - MGP_CBAJ_P0045761 Tpsab1 protein_coding protein_coding MGP_CBAJ_T0045762.1 MGP_CBAJ_G0023051.1 mouse_genomes_project 17 26324795 26327112 - Tpsab1 protein_coding processed_transcript MGP_CBAJ_T0013091.1 MGP_CBAJ_G0011203.1 mouse_genomes_project 17 42199732 42200413 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0045354.1 MGP_CBAJ_G0022938.1 mouse_genomes_project 17 21881155 21899327 + MGP_CBAJ_P0045354 Zfp229 protein_coding protein_coding MGP_CBAJ_T0045355.1 MGP_CBAJ_G0022938.1 mouse_genomes_project 17 21885932 21888334 + Zfp229 protein_coding processed_transcript MGP_CBAJ_T0045356.1 MGP_CBAJ_G0022938.1 mouse_genomes_project 17 21885965 21887170 + Zfp229 protein_coding processed_transcript MGP_CBAJ_T0045357.1 MGP_CBAJ_G0022938.1 mouse_genomes_project 17 21885976 21903234 + MGP_CBAJ_P0045357 Zfp229 protein_coding protein_coding MGP_CBAJ_T0045358.1 MGP_CBAJ_G0022938.1 mouse_genomes_project 17 21885976 21920933 + MGP_CBAJ_P0045358 Zfp229 protein_coding protein_coding MGP_CBAJ_T0045359.1 MGP_CBAJ_G0022938.1 mouse_genomes_project 17 21888164 21903235 + MGP_CBAJ_P0045359 Zfp229 protein_coding protein_coding MGP_CBAJ_T0045360.1 MGP_CBAJ_G0022938.1 mouse_genomes_project 17 21893168 21901174 + MGP_CBAJ_P0045360 Zfp229 protein_coding unknown_likely_coding MGP_CBAJ_T0047377.1 MGP_CBAJ_G0023473.1 mouse_genomes_project 17 47471339 47550912 + MGP_CBAJ_P0047377 Tnfrsf21 protein_coding protein_coding MGP_CBAJ_T0045334.1 MGP_CBAJ_G0022922.1 mouse_genomes_project 17 21037131 21038091 - MGP_CBAJ_P0045334 Vmn1r233 protein_coding protein_coding MGP_CBAJ_T0046444.1 MGP_CBAJ_G0023210.1 mouse_genomes_project 17 35275720 35294484 - MGP_CBAJ_P0046444 Zfp871 protein_coding protein_coding MGP_CBAJ_T0046445.1 MGP_CBAJ_G0023210.1 mouse_genomes_project 17 35281609 35294594 - Zfp871 protein_coding processed_transcript MGP_CBAJ_T0046523.1 MGP_CBAJ_G0023236.1 mouse_genomes_project 17 36247461 36285854 - MGP_CBAJ_P0046523 March2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046524.1 MGP_CBAJ_G0023236.1 mouse_genomes_project 17 36247481 36285829 - MGP_CBAJ_P0046524 March2 protein_coding protein_coding MGP_CBAJ_T0046525.1 MGP_CBAJ_G0023236.1 mouse_genomes_project 17 36247582 36285829 - MGP_CBAJ_P0046525 March2 protein_coding protein_coding MGP_CBAJ_T0046526.1 MGP_CBAJ_G0023236.1 mouse_genomes_project 17 36254890 36285837 - MGP_CBAJ_P0046526 March2 protein_coding protein_coding MGP_CBAJ_T0046527.1 MGP_CBAJ_G0023236.1 mouse_genomes_project 17 36254890 36285824 - MGP_CBAJ_P0046527 March2 protein_coding protein_coding MGP_CBAJ_T0046528.1 MGP_CBAJ_G0023236.1 mouse_genomes_project 17 36255214 36270426 - MGP_CBAJ_P0046528 March2 protein_coding protein_coding MGP_CBAJ_T0046529.1 MGP_CBAJ_G0023236.1 mouse_genomes_project 17 36257596 36285841 - MGP_CBAJ_P0046529 March2 protein_coding protein_coding MGP_CBAJ_T0046530.1 MGP_CBAJ_G0023236.1 mouse_genomes_project 17 36259405 36285775 - MGP_CBAJ_P0046530 March2 protein_coding protein_coding MGP_CBAJ_T0046531.1 MGP_CBAJ_G0023236.1 mouse_genomes_project 17 36270363 36280528 - MGP_CBAJ_P0046531 March2 protein_coding protein_coding MGP_CBAJ_T0045796.1 MGP_CBAJ_G0023059.1 mouse_genomes_project 17 26766258 26768494 + MGP_CBAJ_P0045796 Gng13 protein_coding protein_coding MGP_CBAJ_T0045797.1 MGP_CBAJ_G0023059.1 mouse_genomes_project 17 26766615 26768175 + MGP_CBAJ_P0045797 Gng13 protein_coding protein_coding MGP_CBAJ_T0101736.1 MGP_CBAJ_G0039767.1 mouse_genomes_project 17 39972694 39972915 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0045560.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25380977 25407736 - MGP_CBAJ_P0045560 Traf7 protein_coding protein_coding MGP_CBAJ_T0045561.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25381263 25384901 - Traf7 protein_coding retained_intron MGP_CBAJ_T0045562.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25381263 25394163 - MGP_CBAJ_P0045562 Traf7 protein_coding protein_coding MGP_CBAJ_T0045563.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25381263 25394163 - MGP_CBAJ_P0045563 Traf7 protein_coding protein_coding MGP_CBAJ_T0045564.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25381263 25407644 - MGP_CBAJ_P0045564 Traf7 protein_coding protein_coding MGP_CBAJ_T0045565.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25381263 25407648 - MGP_CBAJ_P0045565 Traf7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045566.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25381263 25407688 - MGP_CBAJ_P0045566 Traf7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045567.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25381267 25383446 - Traf7 protein_coding retained_intron MGP_CBAJ_T0045568.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25382475 25382925 - Traf7 protein_coding retained_intron MGP_CBAJ_T0045569.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25382626 25384785 - Traf7 protein_coding retained_intron MGP_CBAJ_T0045570.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25382898 25384980 - Traf7 protein_coding retained_intron MGP_CBAJ_T0045571.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25384009 25388283 - MGP_CBAJ_P0045571 Traf7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045572.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25384100 25389683 - MGP_CBAJ_P0045572 Traf7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045573.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25384659 25407661 - MGP_CBAJ_P0045573 Traf7 protein_coding protein_coding MGP_CBAJ_T0045574.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25387575 25388182 - Traf7 protein_coding retained_intron MGP_CBAJ_T0045575.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25388002 25407287 - MGP_CBAJ_P0045575 Traf7 protein_coding protein_coding MGP_CBAJ_T0045576.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25388185 25407644 - MGP_CBAJ_P0045576 Traf7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045577.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25388197 25407631 - MGP_CBAJ_P0045577 Traf7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045578.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25388204 25407709 - MGP_CBAJ_P0045578 Traf7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045579.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25388280 25407346 - MGP_CBAJ_P0045579 Traf7 protein_coding protein_coding MGP_CBAJ_T0045580.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25388864 25407644 - MGP_CBAJ_P0045580 Traf7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045581.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25389663 25407619 - MGP_CBAJ_P0045581 Traf7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045582.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25391245 25407648 - Traf7 protein_coding retained_intron MGP_CBAJ_T0045583.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25391510 25407666 - Traf7 protein_coding processed_transcript MGP_CBAJ_T0045584.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25393326 25407649 - Traf7 protein_coding processed_transcript MGP_CBAJ_T0045585.1 MGP_CBAJ_G0023006.1 mouse_genomes_project 17 25393527 25407582 - Traf7 protein_coding retained_intron MGP_CBAJ_T0047712.1 MGP_CBAJ_G0023561.1 mouse_genomes_project 17 53017363 53079404 - MGP_CBAJ_P0047712 Foxp4 protein_coding protein_coding MGP_CBAJ_T0047713.1 MGP_CBAJ_G0023561.1 mouse_genomes_project 17 53017994 53079194 - MGP_CBAJ_P0047713 Foxp4 protein_coding protein_coding MGP_CBAJ_T0047714.1 MGP_CBAJ_G0023561.1 mouse_genomes_project 17 53017994 53079159 - MGP_CBAJ_P0047714 Foxp4 protein_coding protein_coding MGP_CBAJ_T0047715.1 MGP_CBAJ_G0023561.1 mouse_genomes_project 17 53017998 53079235 - MGP_CBAJ_P0047715 Foxp4 protein_coding protein_coding MGP_CBAJ_T0047716.1 MGP_CBAJ_G0023561.1 mouse_genomes_project 17 53028485 53038763 - Foxp4 protein_coding processed_transcript MGP_CBAJ_T0047717.1 MGP_CBAJ_G0023561.1 mouse_genomes_project 17 53028680 53029154 - Foxp4 protein_coding retained_intron MGP_CBAJ_T0047718.1 MGP_CBAJ_G0023561.1 mouse_genomes_project 17 53030529 53038469 - Foxp4 protein_coding retained_intron MGP_CBAJ_T0047719.1 MGP_CBAJ_G0023561.1 mouse_genomes_project 17 53038215 53079185 - Foxp4 protein_coding retained_intron MGP_CBAJ_T0047089.1 MGP_CBAJ_G0023356.1 mouse_genomes_project 17 39066692 39067932 + MGP_CBAJ_P0047089 Ier3 protein_coding protein_coding MGP_CBAJ_T0045904.1 MGP_CBAJ_G0023082.1 mouse_genomes_project 17 27034079 27038939 - MGP_CBAJ_P0045904 Nhlrc4 protein_coding protein_coding MGP_CBAJ_T0045905.1 MGP_CBAJ_G0023082.1 mouse_genomes_project 17 27035996 27038968 - Nhlrc4 protein_coding processed_transcript MGP_CBAJ_T0045906.1 MGP_CBAJ_G0023082.1 mouse_genomes_project 17 27036084 27038838 - Nhlrc4 protein_coding processed_transcript MGP_CBAJ_T0046079.1 MGP_CBAJ_G0023126.1 mouse_genomes_project 17 29289743 29308039 + MGP_CBAJ_P0046079 Snrpc protein_coding protein_coding MGP_CBAJ_T0046080.1 MGP_CBAJ_G0023126.1 mouse_genomes_project 17 29289903 29308043 + Snrpc protein_coding retained_intron MGP_CBAJ_T0045465.1 MGP_CBAJ_G0022979.1 mouse_genomes_project 17 24664120 24666102 + MGP_CBAJ_P0045465 Dcpp1 protein_coding protein_coding MGP_CBAJ_T0047948.1 MGP_CBAJ_G0023649.1 mouse_genomes_project 17 63443296 63452290 - MGP_CBAJ_P0047948 Slc25a41 protein_coding protein_coding MGP_CBAJ_T0047949.1 MGP_CBAJ_G0023649.1 mouse_genomes_project 17 63443448 63452283 - MGP_CBAJ_P0047949 Slc25a41 protein_coding protein_coding MGP_CBAJ_T0013122.1 MGP_CBAJ_G0011234.1 mouse_genomes_project 17 88027282 88031725 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006825.1 MGP_CBAJ_G0005617.1 mouse_genomes_project 17 30789770 30818261 - Trp53cor1 lincRNA lincRNA MGP_CBAJ_T0047343.1 MGP_CBAJ_G0023447.1 mouse_genomes_project 17 42343977 42349051 + MGP_CBAJ_P0047343 Esp31 protein_coding protein_coding MGP_CBAJ_T0046535.1 MGP_CBAJ_G0023238.1 mouse_genomes_project 17 36352631 36360468 - MGP_CBAJ_P0046535 Angptl4 protein_coding protein_coding MGP_CBAJ_T0046536.1 MGP_CBAJ_G0023238.1 mouse_genomes_project 17 36353793 36360436 - MGP_CBAJ_P0046536 Angptl4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046537.1 MGP_CBAJ_G0023238.1 mouse_genomes_project 17 36355856 36357359 - Angptl4 protein_coding retained_intron MGP_CBAJ_T0046538.1 MGP_CBAJ_G0023238.1 mouse_genomes_project 17 36355897 36358037 - Angptl4 protein_coding processed_transcript MGP_CBAJ_T0017294.1 MGP_CBAJ_G0015082.1 mouse_genomes_project 17 25255924 25268659 - D330041H03Rik processed_transcript antisense MGP_CBAJ_T0017295.1 MGP_CBAJ_G0015082.1 mouse_genomes_project 17 25260804 25268743 - D330041H03Rik processed_transcript antisense MGP_CBAJ_T0017296.1 MGP_CBAJ_G0015082.1 mouse_genomes_project 17 25260820 25268637 - D330041H03Rik processed_transcript antisense MGP_CBAJ_T0017297.1 MGP_CBAJ_G0015082.1 mouse_genomes_project 17 25263523 25267858 - D330041H03Rik processed_transcript processed_transcript MGP_CBAJ_T0017298.1 MGP_CBAJ_G0015082.1 mouse_genomes_project 17 25263531 25268761 - D330041H03Rik processed_transcript antisense MGP_CBAJ_T0017299.1 MGP_CBAJ_G0015082.1 mouse_genomes_project 17 25266652 25268657 - D330041H03Rik processed_transcript retained_intron MGP_CBAJ_T0017300.1 MGP_CBAJ_G0015082.1 mouse_genomes_project 17 25266727 25268629 - D330041H03Rik processed_transcript antisense MGP_CBAJ_T0046603.1 MGP_CBAJ_G0023250.1 mouse_genomes_project 17 36585209 36586760 - MGP_CBAJ_P0046603 B3galt4 protein_coding protein_coding MGP_CBAJ_T0046922.1 MGP_CBAJ_G0023316.1 mouse_genomes_project 17 38046652 38050129 - MGP_CBAJ_P0046922 G6b protein_coding protein_coding MGP_CBAJ_T0046923.1 MGP_CBAJ_G0023316.1 mouse_genomes_project 17 38048287 38050115 - MGP_CBAJ_P0046923 G6b protein_coding protein_coding MGP_CBAJ_T0047557.1 MGP_CBAJ_G0023516.1 mouse_genomes_project 17 51315273 51318126 + MGP_CBAJ_P0047557 Crip3 protein_coding protein_coding MGP_CBAJ_T0047558.1 MGP_CBAJ_G0023516.1 mouse_genomes_project 17 51315289 51317927 + Crip3 protein_coding retained_intron MGP_CBAJ_T0047559.1 MGP_CBAJ_G0023516.1 mouse_genomes_project 17 51315289 51318121 + MGP_CBAJ_P0047559 Crip3 protein_coding protein_coding MGP_CBAJ_T0047560.1 MGP_CBAJ_G0023516.1 mouse_genomes_project 17 51315298 51317765 + MGP_CBAJ_P0047560 Crip3 protein_coding protein_coding MGP_CBAJ_T0047561.1 MGP_CBAJ_G0023516.1 mouse_genomes_project 17 51315317 51316835 + Crip3 protein_coding processed_transcript MGP_CBAJ_T0047562.1 MGP_CBAJ_G0023516.1 mouse_genomes_project 17 51317024 51318072 + Crip3 protein_coding retained_intron MGP_CBAJ_T0047563.1 MGP_CBAJ_G0023516.1 mouse_genomes_project 17 51317314 51318047 + Crip3 protein_coding retained_intron MGP_CBAJ_T0047810.1 MGP_CBAJ_G0023588.1 mouse_genomes_project 17 59282449 59315257 + MGP_CBAJ_P0047810 Rab5a protein_coding protein_coding MGP_CBAJ_T0045308.1 MGP_CBAJ_G0022902.1 mouse_genomes_project 17 19516557 19546814 + MGP_CBAJ_P0045308 Vmn2r92 protein_coding protein_coding MGP_CBAJ_T0047404.1 MGP_CBAJ_G0023484.1 mouse_genomes_project 17 48670597 48680082 - MGP_CBAJ_P0047404 Enpp4 protein_coding protein_coding MGP_CBAJ_T0047405.1 MGP_CBAJ_G0023484.1 mouse_genomes_project 17 48670605 48680037 - MGP_CBAJ_P0047405 Enpp4 protein_coding protein_coding MGP_CBAJ_T0048178.1 MGP_CBAJ_G0023725.1 mouse_genomes_project 17 83146535 83181576 + MGP_CBAJ_P0048178 Slc30a6 protein_coding protein_coding MGP_CBAJ_T0048179.1 MGP_CBAJ_G0023725.1 mouse_genomes_project 17 83146535 83181576 + MGP_CBAJ_P0048179 Slc30a6 protein_coding protein_coding MGP_CBAJ_T0013087.1 MGP_CBAJ_G0011199.1 mouse_genomes_project 17 41597224 41597718 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0047663.1 MGP_CBAJ_G0023552.1 mouse_genomes_project 17 52701617 52745081 + Gm20517 protein_coding retained_intron MGP_CBAJ_T0047664.1 MGP_CBAJ_G0023552.1 mouse_genomes_project 17 52701626 52746405 + Gm20517 protein_coding retained_intron MGP_CBAJ_T0047666.1 MGP_CBAJ_G0023552.1 mouse_genomes_project 17 52701641 52783782 + MGP_CBAJ_P0047666 Gm20517 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046315.1 MGP_CBAJ_G0023178.1 mouse_genomes_project 17 33148153 33206189 + MGP_CBAJ_P0046315 Umodl1 protein_coding protein_coding MGP_CBAJ_T0046316.1 MGP_CBAJ_G0023178.1 mouse_genomes_project 17 33148153 33206189 + MGP_CBAJ_P0046316 Umodl1 protein_coding protein_coding MGP_CBAJ_T0046317.1 MGP_CBAJ_G0023178.1 mouse_genomes_project 17 33148157 33206189 + MGP_CBAJ_P0046317 Umodl1 protein_coding protein_coding MGP_CBAJ_T0046318.1 MGP_CBAJ_G0023178.1 mouse_genomes_project 17 33148222 33204221 + MGP_CBAJ_P0046318 Umodl1 protein_coding unknown_likely_coding MGP_CBAJ_T0045591.1 MGP_CBAJ_G0023008.1 mouse_genomes_project 17 25434386 25487179 + MGP_CBAJ_P0045591 Pkd1 protein_coding protein_coding MGP_CBAJ_T0045592.1 MGP_CBAJ_G0023008.1 mouse_genomes_project 17 25434699 25475844 + MGP_CBAJ_P0045592 Pkd1 protein_coding unknown_likely_coding MGP_CBAJ_T0046252.1 MGP_CBAJ_G0023162.1 mouse_genomes_project 17 31111949 31137660 - MGP_CBAJ_P0046252 Mtch1 protein_coding protein_coding MGP_CBAJ_T0046253.1 MGP_CBAJ_G0023162.1 mouse_genomes_project 17 31111953 31137660 - MGP_CBAJ_P0046253 Mtch1 protein_coding protein_coding MGP_CBAJ_T0046254.1 MGP_CBAJ_G0023162.1 mouse_genomes_project 17 31111991 31113883 - Mtch1 protein_coding processed_transcript MGP_CBAJ_T0046255.1 MGP_CBAJ_G0023162.1 mouse_genomes_project 17 31113596 31113985 - Mtch1 protein_coding processed_transcript MGP_CBAJ_T0046256.1 MGP_CBAJ_G0023162.1 mouse_genomes_project 17 31118923 31127676 - Mtch1 protein_coding retained_intron MGP_CBAJ_T0046257.1 MGP_CBAJ_G0023162.1 mouse_genomes_project 17 31127054 31136927 - MGP_CBAJ_P0046257 Mtch1 protein_coding protein_coding MGP_CBAJ_T0046258.1 MGP_CBAJ_G0023162.1 mouse_genomes_project 17 31128013 31130146 - Mtch1 protein_coding retained_intron MGP_CBAJ_T0006890.1 MGP_CBAJ_G0005664.1 mouse_genomes_project 17 97730868 97737540 - 4833418N02Rik lincRNA lincRNA MGP_CBAJ_T0006891.1 MGP_CBAJ_G0005664.1 mouse_genomes_project 17 97730903 97738661 - 4833418N02Rik lincRNA lincRNA MGP_CBAJ_T0006892.1 MGP_CBAJ_G0005664.1 mouse_genomes_project 17 97731229 97738347 - 4833418N02Rik lincRNA lincRNA MGP_CBAJ_T0006893.1 MGP_CBAJ_G0005664.1 mouse_genomes_project 17 97736089 97738626 - 4833418N02Rik lincRNA lincRNA MGP_CBAJ_T0047261.1 MGP_CBAJ_G0023397.1 mouse_genomes_project 17 40477299 40491668 + MGP_CBAJ_P0047261 Zfp57 protein_coding protein_coding MGP_CBAJ_T0047262.1 MGP_CBAJ_G0023397.1 mouse_genomes_project 17 40483578 40490478 + MGP_CBAJ_P0047262 Zfp57 protein_coding protein_coding MGP_CBAJ_T0047263.1 MGP_CBAJ_G0023397.1 mouse_genomes_project 17 40483621 40491668 + MGP_CBAJ_P0047263 Zfp57 protein_coding protein_coding MGP_CBAJ_T0047264.1 MGP_CBAJ_G0023397.1 mouse_genomes_project 17 40483650 40487113 + MGP_CBAJ_P0047264 Zfp57 protein_coding protein_coding MGP_CBAJ_T0047265.1 MGP_CBAJ_G0023397.1 mouse_genomes_project 17 40483665 40484904 + Zfp57 protein_coding retained_intron MGP_CBAJ_T0047266.1 MGP_CBAJ_G0023397.1 mouse_genomes_project 17 40483673 40484782 + Zfp57 protein_coding retained_intron MGP_CBAJ_T0047267.1 MGP_CBAJ_G0023397.1 mouse_genomes_project 17 40483692 40490859 + MGP_CBAJ_P0047267 Zfp57 protein_coding protein_coding MGP_CBAJ_T0047268.1 MGP_CBAJ_G0023397.1 mouse_genomes_project 17 40483708 40487098 + MGP_CBAJ_P0047268 Zfp57 protein_coding protein_coding MGP_CBAJ_T0047269.1 MGP_CBAJ_G0023397.1 mouse_genomes_project 17 40483766 40490782 + MGP_CBAJ_P0047269 Zfp57 protein_coding protein_coding MGP_CBAJ_T0047270.1 MGP_CBAJ_G0023397.1 mouse_genomes_project 17 40484134 40491671 + MGP_CBAJ_P0047270 Zfp57 protein_coding protein_coding MGP_CBAJ_T0047271.1 MGP_CBAJ_G0023397.1 mouse_genomes_project 17 40484762 40491668 + MGP_CBAJ_P0047271 Zfp57 protein_coding protein_coding MGP_CBAJ_T0047272.1 MGP_CBAJ_G0023397.1 mouse_genomes_project 17 40485611 40490751 + MGP_CBAJ_P0047272 Zfp57 protein_coding protein_coding MGP_CBAJ_T0047273.1 MGP_CBAJ_G0023397.1 mouse_genomes_project 17 40485692 40487280 + Zfp57 protein_coding retained_intron MGP_CBAJ_T0101720.1 MGP_CBAJ_G0039751.1 mouse_genomes_project 17 38491858 38493970 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0003713.1 MGP_CBAJ_G0003337.1 mouse_genomes_project 17 95803795 95807940 - antisense antisense MGP_CBAJ_T0046016.1 MGP_CBAJ_G0023110.1 mouse_genomes_project 17 28258232 28261271 + MGP_CBAJ_P0046016 Zbtb9 protein_coding protein_coding MGP_CBAJ_T0101695.1 MGP_CBAJ_G0039726.1 mouse_genomes_project 17 20428438 20429290 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0006853.1 MGP_CBAJ_G0005639.1 mouse_genomes_project 17 50163622 50172093 + B230354K17Rik lincRNA lincRNA MGP_CBAJ_T0047015.1 MGP_CBAJ_G0023341.1 mouse_genomes_project 17 38271447 38274694 + MGP_CBAJ_P0047015 H2-Q10 protein_coding protein_coding MGP_CBAJ_T0048302.1 MGP_CBAJ_G0023773.1 mouse_genomes_project 17 93475699 93536253 - MGP_CBAJ_P0048302 Kcng3 protein_coding protein_coding MGP_CBAJ_T0045144.1 MGP_CBAJ_G0022846.1 mouse_genomes_project 17 10514861 10604700 + MGP_CBAJ_P0045144 Agpat4 protein_coding protein_coding MGP_CBAJ_T0045145.1 MGP_CBAJ_G0022846.1 mouse_genomes_project 17 10515451 10613475 + MGP_CBAJ_P0045145 Agpat4 protein_coding protein_coding MGP_CBAJ_T0045146.1 MGP_CBAJ_G0022846.1 mouse_genomes_project 17 10515496 10534751 + Agpat4 protein_coding processed_transcript MGP_CBAJ_T0045147.1 MGP_CBAJ_G0022846.1 mouse_genomes_project 17 10546757 10604351 + MGP_CBAJ_P0045147 Agpat4 protein_coding protein_coding MGP_CBAJ_T0045148.1 MGP_CBAJ_G0022846.1 mouse_genomes_project 17 10546837 10612923 + MGP_CBAJ_P0045148 Agpat4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045149.1 MGP_CBAJ_G0022846.1 mouse_genomes_project 17 10609148 10613097 + Agpat4 protein_coding retained_intron MGP_CBAJ_T0047594.1 MGP_CBAJ_G0023528.1 mouse_genomes_project 17 51597351 51603740 - MGP_CBAJ_P0047594 Klhdc3 protein_coding protein_coding MGP_CBAJ_T0047595.1 MGP_CBAJ_G0023528.1 mouse_genomes_project 17 51597354 51603740 - MGP_CBAJ_P0047595 Klhdc3 protein_coding protein_coding MGP_CBAJ_T0003639.1 MGP_CBAJ_G0003284.1 mouse_genomes_project 17 9382228 9391019 - Gm28505 antisense antisense MGP_CBAJ_T0048008.1 MGP_CBAJ_G0023675.1 mouse_genomes_project 17 72752712 73043941 - MGP_CBAJ_P0048008 Tmem232 protein_coding protein_coding MGP_CBAJ_T0048009.1 MGP_CBAJ_G0023675.1 mouse_genomes_project 17 72752714 73043935 - MGP_CBAJ_P0048009 Tmem232 protein_coding protein_coding MGP_CBAJ_T0045632.1 MGP_CBAJ_G0023023.1 mouse_genomes_project 17 25680573 25686249 + MGP_CBAJ_P0045632 Hs3st6 protein_coding protein_coding MGP_CBAJ_T0006809.1 MGP_CBAJ_G0005604.1 mouse_genomes_project 17 24455920 24466304 + 9530082P21Rik lincRNA lincRNA MGP_CBAJ_T0006810.1 MGP_CBAJ_G0005604.1 mouse_genomes_project 17 24464630 24469531 + 9530082P21Rik lincRNA lincRNA MGP_CBAJ_T0006811.1 MGP_CBAJ_G0005604.1 mouse_genomes_project 17 24464731 24466596 + 9530082P21Rik lincRNA lincRNA MGP_CBAJ_T0045056.1 MGP_CBAJ_G0022815.1 mouse_genomes_project 17 4276689 4321428 - MGP_CBAJ_P0045056 Ezr protein_coding protein_coding MGP_CBAJ_T0045057.1 MGP_CBAJ_G0022815.1 mouse_genomes_project 17 4279485 4281472 - Ezr protein_coding processed_transcript MGP_CBAJ_T0006813.1 MGP_CBAJ_G0005606.1 mouse_genomes_project 17 26854175 27063915 + lincRNA lincRNA MGP_CBAJ_T0045323.1 MGP_CBAJ_G0022917.1 mouse_genomes_project 17 20844713 20845634 + MGP_CBAJ_P0045323 Vmn1r229 protein_coding protein_coding MGP_CBAJ_T0101752.1 MGP_CBAJ_G0039783.1 mouse_genomes_project 17 40971663 40972033 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0101710.1 MGP_CBAJ_G0039741.1 mouse_genomes_project 17 36754986 36756138 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0045362.1 MGP_CBAJ_G0022940.1 mouse_genomes_project 17 22050537 22080863 - MGP_CBAJ_P0045362 Zfp995 protein_coding protein_coding MGP_CBAJ_T0045363.1 MGP_CBAJ_G0022940.1 mouse_genomes_project 17 22063981 22080576 - Zfp995 protein_coding processed_transcript MGP_CBAJ_T0045364.1 MGP_CBAJ_G0022940.1 mouse_genomes_project 17 22078972 22080862 - Zfp995 protein_coding retained_intron MGP_CBAJ_T0047819.1 MGP_CBAJ_G0023591.1 mouse_genomes_project 17 59504723 59519274 - MGP_CBAJ_P0047819 Sgol1 protein_coding protein_coding MGP_CBAJ_T0047820.1 MGP_CBAJ_G0023591.1 mouse_genomes_project 17 59517501 59519227 - Sgol1 protein_coding processed_transcript MGP_CBAJ_T0047821.1 MGP_CBAJ_G0023591.1 mouse_genomes_project 17 59517648 59519219 - Sgol1 protein_coding processed_transcript MGP_CBAJ_T0047183.1 MGP_CBAJ_G0023371.1 mouse_genomes_project 17 39310824 39323975 - MGP_CBAJ_P0047183 H2-T23 protein_coding protein_coding MGP_CBAJ_T0047184.1 MGP_CBAJ_G0023371.1 mouse_genomes_project 17 39322882 39323850 - H2-T23 protein_coding retained_intron MGP_CBAJ_T0045119.1 MGP_CBAJ_G0022840.1 mouse_genomes_project 17 6555358 6556457 - Gm17087 protein_coding translated_processed_pseudogene MGP_CBAJ_T0045120.1 MGP_CBAJ_G0022840.1 mouse_genomes_project 17 6555905 6556376 - MGP_CBAJ_P0045120 Gm17087 protein_coding protein_coding MGP_CBAJ_T0006846.1 MGP_CBAJ_G0005634.1 mouse_genomes_project 17 39272117 39273999 + Gm20508 lincRNA lincRNA MGP_CBAJ_T0013100.1 MGP_CBAJ_G0011212.1 mouse_genomes_project 17 59531561 59532328 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006843.1 MGP_CBAJ_G0005631.1 mouse_genomes_project 17 38972152 38974228 - Gm20443 lincRNA lincRNA MGP_CBAJ_T0046406.1 MGP_CBAJ_G0023200.1 mouse_genomes_project 17 34699757 34717164 - MGP_CBAJ_P0046406 Akap8 protein_coding protein_coding MGP_CBAJ_T0047522.1 MGP_CBAJ_G0023508.1 mouse_genomes_project 17 51058945 51099853 + MGP_CBAJ_P0047522 Xpo5 protein_coding protein_coding MGP_CBAJ_T0003685.1 MGP_CBAJ_G0003316.1 mouse_genomes_project 17 39113005 39121671 - Ppp1r18os antisense antisense MGP_CBAJ_T0048222.1 MGP_CBAJ_G0023736.1 mouse_genomes_project 17 87994547 88087855 - MGP_CBAJ_P0048222 Strn protein_coding protein_coding MGP_CBAJ_T0048223.1 MGP_CBAJ_G0023736.1 mouse_genomes_project 17 88008084 88027398 - MGP_CBAJ_P0048223 Strn protein_coding protein_coding MGP_CBAJ_T0047619.1 MGP_CBAJ_G0023542.1 mouse_genomes_project 17 52012411 52012672 - MGP_CBAJ_P0047619 Gm16494 protein_coding protein_coding MGP_CBAJ_T0101731.1 MGP_CBAJ_G0039762.1 mouse_genomes_project 17 39585648 39596776 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0006798.1 MGP_CBAJ_G0005593.1 mouse_genomes_project 17 10713930 10722036 + 4732491K20Rik lincRNA lincRNA MGP_CBAJ_T0045503.1 MGP_CBAJ_G0022992.1 mouse_genomes_project 17 24989588 24992489 - Atp6v0c protein_coding processed_transcript MGP_CBAJ_T0045504.1 MGP_CBAJ_G0022992.1 mouse_genomes_project 17 24989588 24994927 - MGP_CBAJ_P0045504 Atp6v0c protein_coding protein_coding MGP_CBAJ_T0045505.1 MGP_CBAJ_G0022992.1 mouse_genomes_project 17 24989875 24995143 - MGP_CBAJ_P0045505 Atp6v0c protein_coding protein_coding MGP_CBAJ_T0045506.1 MGP_CBAJ_G0022992.1 mouse_genomes_project 17 24990142 24995114 - MGP_CBAJ_P0045506 Atp6v0c protein_coding protein_coding MGP_CBAJ_T0045507.1 MGP_CBAJ_G0022992.1 mouse_genomes_project 17 24990260 24994532 - Atp6v0c protein_coding processed_transcript MGP_CBAJ_T0045508.1 MGP_CBAJ_G0022992.1 mouse_genomes_project 17 24990264 24995168 - MGP_CBAJ_P0045508 Atp6v0c protein_coding protein_coding MGP_CBAJ_T0098990.1 MGP_CBAJ_G0037245.1 mouse_genomes_project 17 32913783 32913887 - Gm24661 snRNA snRNA MGP_CBAJ_T0046167.1 MGP_CBAJ_G0023144.1 mouse_genomes_project 17 30196219 30255849 - MGP_CBAJ_P0046167 Srpk1 protein_coding protein_coding MGP_CBAJ_T0046168.1 MGP_CBAJ_G0023144.1 mouse_genomes_project 17 30198623 30218270 - MGP_CBAJ_P0046168 Srpk1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046169.1 MGP_CBAJ_G0023144.1 mouse_genomes_project 17 30199021 30201458 - Srpk1 protein_coding retained_intron MGP_CBAJ_T0046170.1 MGP_CBAJ_G0023144.1 mouse_genomes_project 17 30204505 30212400 - Srpk1 protein_coding retained_intron MGP_CBAJ_T0046171.1 MGP_CBAJ_G0023144.1 mouse_genomes_project 17 30213880 30255779 - Srpk1 protein_coding retained_intron MGP_CBAJ_T0046172.1 MGP_CBAJ_G0023144.1 mouse_genomes_project 17 30253470 30255800 - MGP_CBAJ_P0046172 Srpk1 protein_coding protein_coding MGP_CBAJ_T0047336.1 MGP_CBAJ_G0023443.1 mouse_genomes_project 17 41904538 41905617 + MGP_CBAJ_P0047336 Olfr135 protein_coding protein_coding MGP_CBAJ_T0047397.1 MGP_CBAJ_G0023481.1 mouse_genomes_project 17 48190283 48288758 + MGP_CBAJ_P0047397 Cyp39a1 protein_coding protein_coding MGP_CBAJ_T0048240.1 MGP_CBAJ_G0023744.1 mouse_genomes_project 17 88292875 88303943 + MGP_CBAJ_P0048240 Ndufaf7 protein_coding protein_coding MGP_CBAJ_T0047430.1 MGP_CBAJ_G0023493.1 mouse_genomes_project 17 50311064 50318524 + MGP_CBAJ_P0047430 Nfkbie protein_coding protein_coding MGP_CBAJ_T0045599.1 MGP_CBAJ_G0023013.1 mouse_genomes_project 17 25568734 25582440 + MGP_CBAJ_P0045599 Zfp598 protein_coding protein_coding MGP_CBAJ_T0047293.1 MGP_CBAJ_G0023406.1 mouse_genomes_project 17 40766025 40766999 - MGP_CBAJ_P0047293 Olfr95 protein_coding protein_coding MGP_CBAJ_T0047363.1 MGP_CBAJ_G0023463.1 mouse_genomes_project 17 45007952 45043620 + MGP_CBAJ_P0047363 Rhag protein_coding protein_coding MGP_CBAJ_T0047833.1 MGP_CBAJ_G0023600.1 mouse_genomes_project 17 62050801 62142312 - MGP_CBAJ_P0047833 protein_coding protein_coding MGP_CBAJ_T0046797.1 MGP_CBAJ_G0023294.1 mouse_genomes_project 17 37785301 37787325 - Stk19 protein_coding retained_intron MGP_CBAJ_T0046798.1 MGP_CBAJ_G0023294.1 mouse_genomes_project 17 37785388 37797171 - MGP_CBAJ_P0046798 Stk19 protein_coding protein_coding MGP_CBAJ_T0046799.1 MGP_CBAJ_G0023294.1 mouse_genomes_project 17 37792477 37797633 - Stk19 protein_coding retained_intron MGP_CBAJ_T0046800.1 MGP_CBAJ_G0023294.1 mouse_genomes_project 17 37792717 37797582 - MGP_CBAJ_P0046800 Stk19 protein_coding unknown_likely_coding MGP_CBAJ_T0046801.1 MGP_CBAJ_G0023294.1 mouse_genomes_project 17 37793163 37797460 - Stk19 protein_coding retained_intron MGP_CBAJ_T0047610.1 MGP_CBAJ_G0023535.1 mouse_genomes_project 17 51707045 51707818 + MGP_CBAJ_P0047610 2310039H08Rik protein_coding protein_coding MGP_CBAJ_T0098294.1 MGP_CBAJ_G0036562.1 mouse_genomes_project 17 70574658 70583953 - 4930405O22Rik sense_intronic sense_intronic MGP_CBAJ_T0098295.1 MGP_CBAJ_G0036562.1 mouse_genomes_project 17 70574891 70583955 - 4930405O22Rik sense_intronic sense_intronic MGP_CBAJ_T0047537.1 MGP_CBAJ_G0023511.1 mouse_genomes_project 17 51111714 51114836 + MGP_CBAJ_P0047537 Lrrc73 protein_coding protein_coding MGP_CBAJ_T0099019.1 MGP_CBAJ_G0037274.1 mouse_genomes_project 17 104447078 104447185 - Gm25935 snRNA snRNA MGP_CBAJ_T0101705.1 MGP_CBAJ_G0039736.1 mouse_genomes_project 17 23797227 23827953 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013071.1 MGP_CBAJ_G0011183.1 mouse_genomes_project 17 39608730 39608770 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0011296.1 MGP_CBAJ_G0009434.1 mouse_genomes_project 17 34352874 34353145 + Gm25883 misc_RNA misc_RNA MGP_CBAJ_T0013099.1 MGP_CBAJ_G0011211.1 mouse_genomes_project 17 59430218 59430701 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0046478.1 MGP_CBAJ_G0023224.1 mouse_genomes_project 17 35770933 35773549 - MGP_CBAJ_P0046478 protein_coding protein_coding MGP_CBAJ_T0045909.1 MGP_CBAJ_G0023085.1 mouse_genomes_project 17 27057492 27086552 - MGP_CBAJ_P0045909 Capn15 protein_coding unknown_likely_coding MGP_CBAJ_T0045910.1 MGP_CBAJ_G0023085.1 mouse_genomes_project 17 27058686 27086529 - MGP_CBAJ_P0045910 Capn15 protein_coding protein_coding MGP_CBAJ_T0006816.1 MGP_CBAJ_G0005609.1 mouse_genomes_project 17 28119404 28161517 + Gm20468 lincRNA lincRNA MGP_CBAJ_T0045299.1 MGP_CBAJ_G0022894.1 mouse_genomes_project 17 17790891 17821076 + MGP_CBAJ_P0045299 protein_coding protein_coding MGP_CBAJ_T0048286.1 MGP_CBAJ_G0023766.1 mouse_genomes_project 17 90665117 90704915 - MGP_CBAJ_P0048286 Thumpd2 protein_coding protein_coding MGP_CBAJ_T0006826.1 MGP_CBAJ_G0005618.1 mouse_genomes_project 17 30863128 30893612 + lincRNA lincRNA MGP_CBAJ_T0006827.1 MGP_CBAJ_G0005618.1 mouse_genomes_project 17 30863153 30893618 + lincRNA lincRNA MGP_CBAJ_T0006828.1 MGP_CBAJ_G0005618.1 mouse_genomes_project 17 30863164 30869940 + lincRNA lincRNA MGP_CBAJ_T0006829.1 MGP_CBAJ_G0005618.1 mouse_genomes_project 17 30863182 30893730 + lincRNA lincRNA MGP_CBAJ_T0045322.1 MGP_CBAJ_G0022916.1 mouse_genomes_project 17 20799679 20801122 - MGP_CBAJ_P0045322 Vmn1r228 protein_coding protein_coding MGP_CBAJ_T0045078.1 MGP_CBAJ_G0022826.1 mouse_genomes_project 17 5793681 5805218 + MGP_CBAJ_P0045078 protein_coding protein_coding MGP_CBAJ_T0047679.1 MGP_CBAJ_G0023557.1 mouse_genomes_project 17 52788982 52799749 + MGP_CBAJ_P0047679 Frs3 protein_coding protein_coding MGP_CBAJ_T0047682.1 MGP_CBAJ_G0023557.1 mouse_genomes_project 17 52795286 52804486 + MGP_CBAJ_P0047682 Frs3 protein_coding protein_coding MGP_CBAJ_T0047683.1 MGP_CBAJ_G0023557.1 mouse_genomes_project 17 52795313 52797860 + Frs3 protein_coding processed_transcript MGP_CBAJ_T0047684.1 MGP_CBAJ_G0023557.1 mouse_genomes_project 17 52799756 52801073 + Frs3 protein_coding processed_transcript MGP_CBAJ_T0047685.1 MGP_CBAJ_G0023557.1 mouse_genomes_project 17 52802262 52804484 + Frs3 protein_coding processed_transcript MGP_CBAJ_T0101747.1 MGP_CBAJ_G0039778.1 mouse_genomes_project 17 40677802 40678649 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0046471.1 MGP_CBAJ_G0023220.1 mouse_genomes_project 17 35624778 35641667 + MGP_CBAJ_P0046471 Zfp563 protein_coding protein_coding MGP_CBAJ_T0046472.1 MGP_CBAJ_G0023220.1 mouse_genomes_project 17 35625032 35640188 + MGP_CBAJ_P0046472 Zfp563 protein_coding protein_coding MGP_CBAJ_T0046473.1 MGP_CBAJ_G0023220.1 mouse_genomes_project 17 35627907 35640522 + MGP_CBAJ_P0046473 Zfp563 protein_coding protein_coding MGP_CBAJ_T0047604.1 MGP_CBAJ_G0023533.1 mouse_genomes_project 17 51672404 51686990 - MGP_CBAJ_P0047604 Cnpy3 protein_coding protein_coding MGP_CBAJ_T0047605.1 MGP_CBAJ_G0023533.1 mouse_genomes_project 17 51672455 51686973 - MGP_CBAJ_P0047605 Cnpy3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047606.1 MGP_CBAJ_G0023533.1 mouse_genomes_project 17 51673352 51674331 - Cnpy3 protein_coding retained_intron MGP_CBAJ_T0047607.1 MGP_CBAJ_G0023533.1 mouse_genomes_project 17 51681762 51686971 - MGP_CBAJ_P0047607 Cnpy3 protein_coding protein_coding MGP_CBAJ_T0047608.1 MGP_CBAJ_G0023533.1 mouse_genomes_project 17 51681994 51686953 - Cnpy3 protein_coding retained_intron MGP_CBAJ_T0017329.1 MGP_CBAJ_G0015095.1 mouse_genomes_project 17 54822500 54823804 - Gm20540 processed_transcript processed_transcript MGP_CBAJ_T0046277.1 MGP_CBAJ_G0023169.1 mouse_genomes_project 17 31458914 31565814 + MGP_CBAJ_P0046277 Gm28043 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048284.1 MGP_CBAJ_G0023764.1 mouse_genomes_project 17 90575577 90577632 - MGP_CBAJ_P0048284 protein_coding protein_coding MGP_CBAJ_T0099012.1 MGP_CBAJ_G0037267.1 mouse_genomes_project 17 89517724 89517820 + Gm22215 snRNA snRNA MGP_CBAJ_T0098985.1 MGP_CBAJ_G0037240.1 mouse_genomes_project 17 13595526 13595590 - Gm23352 snRNA snRNA MGP_CBAJ_T0046187.1 MGP_CBAJ_G0023148.1 mouse_genomes_project 17 30466063 30470589 + Brpf3 protein_coding processed_transcript MGP_CBAJ_T0046188.1 MGP_CBAJ_G0023148.1 mouse_genomes_project 17 30469123 30503705 + MGP_CBAJ_P0046188 Brpf3 protein_coding unknown_likely_coding MGP_CBAJ_T0046189.1 MGP_CBAJ_G0023148.1 mouse_genomes_project 17 30473650 30480745 + Brpf3 protein_coding processed_transcript MGP_CBAJ_T0046190.1 MGP_CBAJ_G0023148.1 mouse_genomes_project 17 30474542 30505491 + Brpf3 protein_coding retained_intron MGP_CBAJ_T0046191.1 MGP_CBAJ_G0023148.1 mouse_genomes_project 17 30478025 30481123 + Brpf3 protein_coding retained_intron MGP_CBAJ_T0046192.1 MGP_CBAJ_G0023148.1 mouse_genomes_project 17 30478178 30481361 + Brpf3 protein_coding processed_transcript MGP_CBAJ_T0046193.1 MGP_CBAJ_G0023148.1 mouse_genomes_project 17 30489648 30503710 + Brpf3 protein_coding processed_transcript MGP_CBAJ_T0046194.1 MGP_CBAJ_G0023148.1 mouse_genomes_project 17 30490603 30503748 + Brpf3 protein_coding processed_transcript MGP_CBAJ_T0046195.1 MGP_CBAJ_G0023148.1 mouse_genomes_project 17 30490683 30505539 + Brpf3 protein_coding processed_transcript MGP_CBAJ_T0046196.1 MGP_CBAJ_G0023148.1 mouse_genomes_project 17 30495091 30503803 + Brpf3 protein_coding processed_transcript MGP_CBAJ_T0045371.1 MGP_CBAJ_G0022944.1 mouse_genomes_project 17 22461359 22469454 - MGP_CBAJ_P0045371 protein_coding protein_coding MGP_CBAJ_T0045230.1 MGP_CBAJ_G0022873.1 mouse_genomes_project 17 13792686 13819339 - MGP_CBAJ_P0045230 Gm3448 protein_coding protein_coding MGP_CBAJ_T0045231.1 MGP_CBAJ_G0022873.1 mouse_genomes_project 17 13792686 13819339 - MGP_CBAJ_P0045231 Gm3448 protein_coding protein_coding MGP_CBAJ_T0047929.1 MGP_CBAJ_G0023635.1 mouse_genomes_project 17 63076701 63083188 + MGP_CBAJ_P0047929 Ndufa11 protein_coding protein_coding MGP_CBAJ_T0047047.1 MGP_CBAJ_G0023350.1 mouse_genomes_project 17 38801702 38869546 + MGP_CBAJ_P0047047 Sfta2 protein_coding protein_coding MGP_CBAJ_T0047048.1 MGP_CBAJ_G0023350.1 mouse_genomes_project 17 38801731 38869544 + Sfta2 protein_coding processed_transcript MGP_CBAJ_T0047052.1 MGP_CBAJ_G0023350.1 mouse_genomes_project 17 38868686 38869550 + MGP_CBAJ_P0047052 Sfta2 protein_coding protein_coding MGP_CBAJ_T0101065.1 MGP_CBAJ_G0039284.1 mouse_genomes_project 17 98780829 98786324 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101066.1 MGP_CBAJ_G0039284.1 mouse_genomes_project 17 98786032 98786431 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0045383.1 MGP_CBAJ_G0022950.1 mouse_genomes_project 17 23203984 23219117 + MGP_CBAJ_P0045383 Gm5493 protein_coding protein_coding MGP_CBAJ_T0046422.1 MGP_CBAJ_G0023203.1 mouse_genomes_project 17 34785411 34798391 - MGP_CBAJ_P0046422 Rasal3 protein_coding protein_coding MGP_CBAJ_T0046423.1 MGP_CBAJ_G0023203.1 mouse_genomes_project 17 34785413 34798367 - MGP_CBAJ_P0046423 Rasal3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046424.1 MGP_CBAJ_G0023203.1 mouse_genomes_project 17 34785422 34798376 - Rasal3 protein_coding retained_intron MGP_CBAJ_T0046425.1 MGP_CBAJ_G0023203.1 mouse_genomes_project 17 34785669 34786261 - Rasal3 protein_coding retained_intron MGP_CBAJ_T0046426.1 MGP_CBAJ_G0023203.1 mouse_genomes_project 17 34785676 34798389 - MGP_CBAJ_P0046426 Rasal3 protein_coding protein_coding MGP_CBAJ_T0046427.1 MGP_CBAJ_G0023203.1 mouse_genomes_project 17 34785725 34798345 - MGP_CBAJ_P0046427 Rasal3 protein_coding protein_coding MGP_CBAJ_T0046428.1 MGP_CBAJ_G0023203.1 mouse_genomes_project 17 34787391 34788479 - Rasal3 protein_coding retained_intron MGP_CBAJ_T0046429.1 MGP_CBAJ_G0023203.1 mouse_genomes_project 17 34788675 34790124 - Rasal3 protein_coding retained_intron MGP_CBAJ_T0046430.1 MGP_CBAJ_G0023203.1 mouse_genomes_project 17 34790319 34791537 - Rasal3 protein_coding retained_intron MGP_CBAJ_T0046431.1 MGP_CBAJ_G0023203.1 mouse_genomes_project 17 34793603 34798389 - Rasal3 protein_coding retained_intron MGP_CBAJ_T0047185.1 MGP_CBAJ_G0023372.1 mouse_genomes_project 17 39330410 39348892 + MGP_CBAJ_P0047185 protein_coding protein_coding MGP_CBAJ_T0048226.1 MGP_CBAJ_G0023739.1 mouse_genomes_project 17 88198146 88199352 - protein_coding retained_intron MGP_CBAJ_T0048227.1 MGP_CBAJ_G0023739.1 mouse_genomes_project 17 88198321 88198780 - protein_coding processed_transcript MGP_CBAJ_T0003697.1 MGP_CBAJ_G0003325.1 mouse_genomes_project 17 52787562 52791069 + Tomm6os antisense antisense MGP_CBAJ_T0047790.1 MGP_CBAJ_G0023583.1 mouse_genomes_project 17 56033227 56224396 + MGP_CBAJ_P0047790 Plcl2 protein_coding protein_coding MGP_CBAJ_T0101711.1 MGP_CBAJ_G0039742.1 mouse_genomes_project 17 37106240 37107947 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047956.1 MGP_CBAJ_G0023651.1 mouse_genomes_project 17 63471798 63488109 + MGP_CBAJ_P0047956 Crb3 protein_coding protein_coding MGP_CBAJ_T0047957.1 MGP_CBAJ_G0023651.1 mouse_genomes_project 17 63479603 63488115 + MGP_CBAJ_P0047957 Crb3 protein_coding protein_coding MGP_CBAJ_T0047958.1 MGP_CBAJ_G0023651.1 mouse_genomes_project 17 63479655 63488114 + MGP_CBAJ_P0047958 Crb3 protein_coding protein_coding MGP_CBAJ_T0047959.1 MGP_CBAJ_G0023651.1 mouse_genomes_project 17 63479671 63487624 + MGP_CBAJ_P0047959 Crb3 protein_coding protein_coding MGP_CBAJ_T0047960.1 MGP_CBAJ_G0023651.1 mouse_genomes_project 17 63479880 63487361 + MGP_CBAJ_P0047960 Crb3 protein_coding protein_coding MGP_CBAJ_T0045316.1 MGP_CBAJ_G0022910.1 mouse_genomes_project 17 20421296 20422193 + MGP_CBAJ_P0045316 Vmn1r224 protein_coding protein_coding MGP_CBAJ_T0045101.1 MGP_CBAJ_G0022835.1 mouse_genomes_project 17 6269414 6285736 + Sft2d1 protein_coding retained_intron MGP_CBAJ_T0045102.1 MGP_CBAJ_G0022835.1 mouse_genomes_project 17 6269414 6285736 + MGP_CBAJ_P0045102 Sft2d1 protein_coding protein_coding MGP_CBAJ_T0045103.1 MGP_CBAJ_G0022835.1 mouse_genomes_project 17 6269421 6356479 + Sft2d1 protein_coding processed_transcript MGP_CBAJ_T0045104.1 MGP_CBAJ_G0022835.1 mouse_genomes_project 17 6269434 6285350 + MGP_CBAJ_P0045104 Sft2d1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045105.1 MGP_CBAJ_G0022835.1 mouse_genomes_project 17 6269451 6285303 + Sft2d1 protein_coding processed_transcript MGP_CBAJ_T0045106.1 MGP_CBAJ_G0022835.1 mouse_genomes_project 17 6269481 6285734 + MGP_CBAJ_P0045106 Sft2d1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045107.1 MGP_CBAJ_G0022835.1 mouse_genomes_project 17 6269487 6276517 + Sft2d1 protein_coding retained_intron MGP_CBAJ_T0045109.1 MGP_CBAJ_G0022835.1 mouse_genomes_project 17 6277037 6282746 + Sft2d1 protein_coding retained_intron MGP_CBAJ_T0045110.1 MGP_CBAJ_G0022835.1 mouse_genomes_project 17 6278856 6285357 + Sft2d1 protein_coding retained_intron MGP_CBAJ_T0045111.1 MGP_CBAJ_G0022835.1 mouse_genomes_project 17 6282668 6285734 + Sft2d1 protein_coding retained_intron MGP_CBAJ_T0045604.1 MGP_CBAJ_G0023017.1 mouse_genomes_project 17 25608176 25623727 - MGP_CBAJ_P0045604 Tbl3 protein_coding protein_coding MGP_CBAJ_T0045613.1 MGP_CBAJ_G0023017.1 mouse_genomes_project 17 25610687 25623698 - Tbl3 protein_coding retained_intron MGP_CBAJ_T0045614.1 MGP_CBAJ_G0023017.1 mouse_genomes_project 17 25611115 25612737 - MGP_CBAJ_P0045614 Tbl3 protein_coding protein_coding MGP_CBAJ_T0045615.1 MGP_CBAJ_G0023017.1 mouse_genomes_project 17 25612247 25613570 - Tbl3 protein_coding retained_intron MGP_CBAJ_T0045616.1 MGP_CBAJ_G0023017.1 mouse_genomes_project 17 25614911 25621891 - Tbl3 protein_coding retained_intron MGP_CBAJ_T0048029.1 MGP_CBAJ_G0023682.1 mouse_genomes_project 17 73536144 73654013 - MGP_CBAJ_P0048029 Ankrd12 protein_coding protein_coding MGP_CBAJ_T0048030.1 MGP_CBAJ_G0023682.1 mouse_genomes_project 17 73536656 73541044 - Ankrd12 protein_coding processed_transcript MGP_CBAJ_T0048031.1 MGP_CBAJ_G0023682.1 mouse_genomes_project 17 73544507 73552008 - Ankrd12 protein_coding processed_transcript MGP_CBAJ_T0048032.1 MGP_CBAJ_G0023682.1 mouse_genomes_project 17 73556098 73653989 - MGP_CBAJ_P0048032 Ankrd12 protein_coding protein_coding MGP_CBAJ_T0048033.1 MGP_CBAJ_G0023682.1 mouse_genomes_project 17 73595805 73654011 - Ankrd12 protein_coding retained_intron MGP_CBAJ_T0048034.1 MGP_CBAJ_G0023682.1 mouse_genomes_project 17 73611992 73654056 - Ankrd12 protein_coding retained_intron MGP_CBAJ_T0048035.1 MGP_CBAJ_G0023682.1 mouse_genomes_project 17 73612333 73654006 - Ankrd12 protein_coding retained_intron MGP_CBAJ_T0048036.1 MGP_CBAJ_G0023682.1 mouse_genomes_project 17 73624953 73625808 - Ankrd12 protein_coding processed_transcript MGP_CBAJ_T0045304.1 MGP_CBAJ_G0022898.1 mouse_genomes_project 17 18821403 18948919 + MGP_CBAJ_P0045304 Vmn2r97 protein_coding protein_coding MGP_CBAJ_T0046017.1 MGP_CBAJ_G0023111.1 mouse_genomes_project 17 28258282 28333081 + MGP_CBAJ_P0046017 Ggnbp1 protein_coding protein_coding MGP_CBAJ_T0046018.1 MGP_CBAJ_G0023111.1 mouse_genomes_project 17 28307797 28318339 + Ggnbp1 protein_coding retained_intron MGP_CBAJ_T0046019.1 MGP_CBAJ_G0023111.1 mouse_genomes_project 17 28307808 28333081 + MGP_CBAJ_P0046019 Ggnbp1 protein_coding protein_coding MGP_CBAJ_T0046020.1 MGP_CBAJ_G0023111.1 mouse_genomes_project 17 28307824 28314199 + Ggnbp1 protein_coding processed_transcript MGP_CBAJ_T0046025.1 MGP_CBAJ_G0023111.1 mouse_genomes_project 17 28324239 28333081 + MGP_CBAJ_P0046025 Ggnbp1 protein_coding protein_coding MGP_CBAJ_T0046026.1 MGP_CBAJ_G0023111.1 mouse_genomes_project 17 28325357 28330284 + Ggnbp1 protein_coding retained_intron MGP_CBAJ_T0045649.1 MGP_CBAJ_G0023030.1 mouse_genomes_project 17 25818082 25827775 - MGP_CBAJ_P0045649 Eme2 protein_coding protein_coding MGP_CBAJ_T0045650.1 MGP_CBAJ_G0023030.1 mouse_genomes_project 17 25824870 25827807 - MGP_CBAJ_P0045650 Eme2 protein_coding protein_coding MGP_CBAJ_T0045652.1 MGP_CBAJ_G0023030.1 mouse_genomes_project 17 25824873 25827779 - MGP_CBAJ_P0045652 Eme2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045653.1 MGP_CBAJ_G0023030.1 mouse_genomes_project 17 25825198 25827798 - Eme2 protein_coding retained_intron MGP_CBAJ_T0045654.1 MGP_CBAJ_G0023030.1 mouse_genomes_project 17 25825498 25826904 - Eme2 protein_coding retained_intron MGP_CBAJ_T0045655.1 MGP_CBAJ_G0023030.1 mouse_genomes_project 17 25825857 25827775 - Eme2 protein_coding retained_intron MGP_CBAJ_T0045656.1 MGP_CBAJ_G0023030.1 mouse_genomes_project 17 25826080 25827782 - Eme2 protein_coding retained_intron MGP_CBAJ_T0045657.1 MGP_CBAJ_G0023030.1 mouse_genomes_project 17 25826465 25827745 - Eme2 protein_coding retained_intron MGP_CBAJ_T0013126.1 MGP_CBAJ_G0011238.1 mouse_genomes_project 17 95006028 95006572 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010073.1 MGP_CBAJ_G0008211.1 mouse_genomes_project 17 30160327 30160388 - Mir6969 miRNA miRNA MGP_CBAJ_T0046501.1 MGP_CBAJ_G0023232.1 mouse_genomes_project 17 36108290 36174171 + MGP_CBAJ_P0046501 Myo1f protein_coding protein_coding MGP_CBAJ_T0046502.1 MGP_CBAJ_G0023232.1 mouse_genomes_project 17 36108316 36174167 + MGP_CBAJ_P0046502 Myo1f protein_coding nonsense_mediated_decay MGP_CBAJ_T0046503.1 MGP_CBAJ_G0023232.1 mouse_genomes_project 17 36108336 36136376 + MGP_CBAJ_P0046503 Myo1f protein_coding protein_coding MGP_CBAJ_T0046504.1 MGP_CBAJ_G0023232.1 mouse_genomes_project 17 36140670 36174173 + Myo1f protein_coding retained_intron MGP_CBAJ_T0101719.1 MGP_CBAJ_G0039750.1 mouse_genomes_project 17 38179773 38188996 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047639.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52569553 52689524 + MGP_CBAJ_P0047639 Ccnd3 protein_coding protein_coding MGP_CBAJ_T0047640.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52569553 52687750 + MGP_CBAJ_P0047640 Ccnd3 protein_coding protein_coding MGP_CBAJ_T0047641.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52569581 52687145 + MGP_CBAJ_P0047641 Ccnd3 protein_coding protein_coding MGP_CBAJ_T0047642.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52569621 52689524 + MGP_CBAJ_P0047642 Ccnd3 protein_coding protein_coding MGP_CBAJ_T0047643.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52569630 52689532 + MGP_CBAJ_P0047643 Ccnd3 protein_coding protein_coding MGP_CBAJ_T0047644.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52569651 52689530 + MGP_CBAJ_P0047644 Ccnd3 protein_coding protein_coding MGP_CBAJ_T0047645.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52569658 52688357 + MGP_CBAJ_P0047645 Ccnd3 protein_coding protein_coding MGP_CBAJ_T0047646.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52569664 52661069 + Ccnd3 protein_coding retained_intron MGP_CBAJ_T0047647.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52569721 52661469 + Ccnd3 protein_coding retained_intron MGP_CBAJ_T0047648.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52569733 52683427 + MGP_CBAJ_P0047648 Ccnd3 protein_coding protein_coding MGP_CBAJ_T0047649.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52569742 52661241 + Ccnd3 protein_coding retained_intron MGP_CBAJ_T0047650.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52569743 52572414 + Ccnd3 protein_coding retained_intron MGP_CBAJ_T0047651.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52569743 52688379 + MGP_CBAJ_P0047651 Ccnd3 protein_coding protein_coding MGP_CBAJ_T0047652.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52683078 52687870 + Ccnd3 protein_coding retained_intron MGP_CBAJ_T0047653.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52683112 52689530 + MGP_CBAJ_P0047653 Ccnd3 protein_coding protein_coding MGP_CBAJ_T0047654.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52683171 52687259 + MGP_CBAJ_P0047654 Ccnd3 protein_coding protein_coding MGP_CBAJ_T0047655.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52683955 52687175 + MGP_CBAJ_P0047655 Ccnd3 protein_coding protein_coding MGP_CBAJ_T0047656.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52684398 52688593 + MGP_CBAJ_P0047656 Ccnd3 protein_coding protein_coding MGP_CBAJ_T0047657.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52685747 52688824 + MGP_CBAJ_P0047657 Ccnd3 protein_coding protein_coding MGP_CBAJ_T0047658.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52686003 52688442 + MGP_CBAJ_P0047658 Ccnd3 protein_coding protein_coding MGP_CBAJ_T0047659.1 MGP_CBAJ_G0023549.1 mouse_genomes_project 17 52686843 52687785 + MGP_CBAJ_P0047659 Ccnd3 protein_coding protein_coding MGP_CBAJ_T0006842.1 MGP_CBAJ_G0005630.1 mouse_genomes_project 17 38159331 38161400 + Gm17705 lincRNA lincRNA MGP_CBAJ_T0047440.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50345936 50363292 - MGP_CBAJ_P0047440 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047441.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50345936 50353303 - MGP_CBAJ_P0047441 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047442.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50345938 50354369 - MGP_CBAJ_P0047442 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047443.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50345939 50356299 - MGP_CBAJ_P0047443 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047444.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50345939 50356633 - MGP_CBAJ_P0047444 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047445.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50345939 50356301 - MGP_CBAJ_P0047445 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047446.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50346278 50353225 - MGP_CBAJ_P0047446 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047447.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50346407 50352989 - MGP_CBAJ_P0047447 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047448.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50346954 50349468 - Slc29a1 protein_coding processed_transcript MGP_CBAJ_T0047449.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50349092 50356231 - MGP_CBAJ_P0047449 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047450.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50349093 50356331 - MGP_CBAJ_P0047450 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047451.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50349246 50353568 - Slc29a1 protein_coding retained_intron MGP_CBAJ_T0047452.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50349594 50350838 - Slc29a1 protein_coding retained_intron MGP_CBAJ_T0047453.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50349933 50356280 - Slc29a1 protein_coding retained_intron MGP_CBAJ_T0047454.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50350143 50356244 - Slc29a1 protein_coding retained_intron MGP_CBAJ_T0047455.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50350143 50363293 - MGP_CBAJ_P0047455 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047456.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50350243 50356582 - MGP_CBAJ_P0047456 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047457.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50350249 50354363 - MGP_CBAJ_P0047457 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047458.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50350423 50363295 - MGP_CBAJ_P0047458 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047459.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50350448 50356285 - MGP_CBAJ_P0047459 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047460.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50350498 50356231 - MGP_CBAJ_P0047460 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047461.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50350683 50356270 - MGP_CBAJ_P0047461 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047462.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50350749 50356272 - MGP_CBAJ_P0047462 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047463.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50350795 50356687 - MGP_CBAJ_P0047463 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047464.1 MGP_CBAJ_G0023496.1 mouse_genomes_project 17 50350838 50357820 - MGP_CBAJ_P0047464 Slc29a1 protein_coding protein_coding MGP_CBAJ_T0047330.1 MGP_CBAJ_G0023439.1 mouse_genomes_project 17 41765698 41773644 - MGP_CBAJ_P0047330 Olfr131 protein_coding protein_coding MGP_CBAJ_T0047331.1 MGP_CBAJ_G0023439.1 mouse_genomes_project 17 41765698 41766728 - MGP_CBAJ_P0047331 Olfr131 protein_coding protein_coding MGP_CBAJ_T0045063.1 MGP_CBAJ_G0022821.1 mouse_genomes_project 17 5055382 5078101 + MGP_CBAJ_P0045063 protein_coding protein_coding MGP_CBAJ_T0045064.1 MGP_CBAJ_G0022821.1 mouse_genomes_project 17 5055403 5077629 + MGP_CBAJ_P0045064 protein_coding protein_coding MGP_CBAJ_T0045065.1 MGP_CBAJ_G0022821.1 mouse_genomes_project 17 5055422 5077326 + MGP_CBAJ_P0045065 protein_coding protein_coding MGP_CBAJ_T0045066.1 MGP_CBAJ_G0022821.1 mouse_genomes_project 17 5055447 5077140 + MGP_CBAJ_P0045066 protein_coding protein_coding MGP_CBAJ_T0045067.1 MGP_CBAJ_G0022821.1 mouse_genomes_project 17 5055470 5077639 + MGP_CBAJ_P0045067 protein_coding protein_coding MGP_CBAJ_T0045068.1 MGP_CBAJ_G0022821.1 mouse_genomes_project 17 5055603 5065772 + MGP_CBAJ_P0045068 protein_coding protein_coding MGP_CBAJ_T0000950.1 MGP_CBAJ_G0000882.1 mouse_genomes_project 17 55718398 55719415 + TEC TEC MGP_CBAJ_T0045311.1 MGP_CBAJ_G0022905.1 mouse_genomes_project 17 20065577 20156799 - MGP_CBAJ_P0045311 protein_coding protein_coding MGP_CBAJ_T0046456.1 MGP_CBAJ_G0023215.1 mouse_genomes_project 17 35443137 35467596 - MGP_CBAJ_P0046456 Cyp4f13 protein_coding protein_coding MGP_CBAJ_T0046457.1 MGP_CBAJ_G0023215.1 mouse_genomes_project 17 35443150 35467573 - MGP_CBAJ_P0046457 Cyp4f13 protein_coding protein_coding MGP_CBAJ_T0046458.1 MGP_CBAJ_G0023215.1 mouse_genomes_project 17 35443165 35467560 - MGP_CBAJ_P0046458 Cyp4f13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046459.1 MGP_CBAJ_G0023215.1 mouse_genomes_project 17 35443775 35444329 - Cyp4f13 protein_coding retained_intron MGP_CBAJ_T0046460.1 MGP_CBAJ_G0023215.1 mouse_genomes_project 17 35450860 35467596 - MGP_CBAJ_P0046460 Cyp4f13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046461.1 MGP_CBAJ_G0023215.1 mouse_genomes_project 17 35451072 35467554 - MGP_CBAJ_P0046461 Cyp4f13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046462.1 MGP_CBAJ_G0023215.1 mouse_genomes_project 17 35460011 35467585 - Cyp4f13 protein_coding retained_intron MGP_CBAJ_T0045661.1 MGP_CBAJ_G0023033.1 mouse_genomes_project 17 25829218 25830251 + MGP_CBAJ_P0045661 Nme3 protein_coding protein_coding MGP_CBAJ_T0045662.1 MGP_CBAJ_G0023033.1 mouse_genomes_project 17 25829223 25830064 + Nme3 protein_coding processed_transcript MGP_CBAJ_T0045663.1 MGP_CBAJ_G0023033.1 mouse_genomes_project 17 25829239 25829973 + Nme3 protein_coding retained_intron MGP_CBAJ_T0045664.1 MGP_CBAJ_G0023033.1 mouse_genomes_project 17 25829241 25830213 + Nme3 protein_coding retained_intron MGP_CBAJ_T0045665.1 MGP_CBAJ_G0023033.1 mouse_genomes_project 17 25829479 25830076 + Nme3 protein_coding retained_intron MGP_CBAJ_T0047322.1 MGP_CBAJ_G0023432.1 mouse_genomes_project 17 41476386 41477504 + MGP_CBAJ_P0047322 Olfr125 protein_coding protein_coding MGP_CBAJ_T0048313.1 MGP_CBAJ_G0023775.1 mouse_genomes_project 17 93766813 93785617 - MGP_CBAJ_P0048313 Haao protein_coding protein_coding MGP_CBAJ_T0048322.1 MGP_CBAJ_G0023781.1 mouse_genomes_project 17 94733434 94761696 + MGP_CBAJ_P0048322 Abcg8 protein_coding protein_coding MGP_CBAJ_T0048323.1 MGP_CBAJ_G0023781.1 mouse_genomes_project 17 94733545 94760162 + MGP_CBAJ_P0048323 Abcg8 protein_coding protein_coding MGP_CBAJ_T0047125.1 MGP_CBAJ_G0023363.1 mouse_genomes_project 17 39149535 39155401 - MGP_CBAJ_P0047125 2310061I04Rik protein_coding protein_coding MGP_CBAJ_T0047126.1 MGP_CBAJ_G0023363.1 mouse_genomes_project 17 39149539 39157113 - MGP_CBAJ_P0047126 2310061I04Rik protein_coding protein_coding MGP_CBAJ_T0047127.1 MGP_CBAJ_G0023363.1 mouse_genomes_project 17 39149539 39156803 - MGP_CBAJ_P0047127 2310061I04Rik protein_coding protein_coding MGP_CBAJ_T0047128.1 MGP_CBAJ_G0023363.1 mouse_genomes_project 17 39149549 39156794 - MGP_CBAJ_P0047128 2310061I04Rik protein_coding protein_coding MGP_CBAJ_T0047129.1 MGP_CBAJ_G0023363.1 mouse_genomes_project 17 39149693 39155606 - MGP_CBAJ_P0047129 2310061I04Rik protein_coding protein_coding MGP_CBAJ_T0047130.1 MGP_CBAJ_G0023363.1 mouse_genomes_project 17 39154729 39156756 - MGP_CBAJ_P0047130 2310061I04Rik protein_coding protein_coding MGP_CBAJ_T0047131.1 MGP_CBAJ_G0023363.1 mouse_genomes_project 17 39155456 39156291 - 2310061I04Rik protein_coding processed_transcript MGP_CBAJ_T0047132.1 MGP_CBAJ_G0023363.1 mouse_genomes_project 17 39155605 39156786 - MGP_CBAJ_P0047132 2310061I04Rik protein_coding protein_coding MGP_CBAJ_T0047133.1 MGP_CBAJ_G0023363.1 mouse_genomes_project 17 39155958 39156995 - 2310061I04Rik protein_coding processed_transcript MGP_CBAJ_T0003712.1 MGP_CBAJ_G0003336.1 mouse_genomes_project 17 80097898 80098867 - Gm15641 antisense antisense MGP_CBAJ_T0045219.1 MGP_CBAJ_G0022870.1 mouse_genomes_project 17 13768340 13771093 + MGP_CBAJ_P0045219 1600012H06Rik protein_coding protein_coding MGP_CBAJ_T0045220.1 MGP_CBAJ_G0022870.1 mouse_genomes_project 17 13768386 13771091 + MGP_CBAJ_P0045220 1600012H06Rik protein_coding protein_coding MGP_CBAJ_T0045221.1 MGP_CBAJ_G0022870.1 mouse_genomes_project 17 13768425 13770143 + MGP_CBAJ_P0045221 1600012H06Rik protein_coding protein_coding MGP_CBAJ_T0045222.1 MGP_CBAJ_G0022870.1 mouse_genomes_project 17 13768427 13784731 + 1600012H06Rik protein_coding processed_transcript MGP_CBAJ_T0045131.1 MGP_CBAJ_G0022843.1 mouse_genomes_project 17 8397873 8528204 - MGP_CBAJ_P0045131 Qk protein_coding protein_coding MGP_CBAJ_T0045132.1 MGP_CBAJ_G0022843.1 mouse_genomes_project 17 8401581 8528204 - MGP_CBAJ_P0045132 Qk protein_coding protein_coding MGP_CBAJ_T0013082.1 MGP_CBAJ_G0011194.1 mouse_genomes_project 17 41483572 41486192 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0047319.1 MGP_CBAJ_G0023429.1 mouse_genomes_project 17 41330381 41381209 + MGP_CBAJ_P0047319 protein_coding protein_coding MGP_CBAJ_T0101277.1 MGP_CBAJ_G0039402.1 mouse_genomes_project 17 36597725 36599449 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101278.1 MGP_CBAJ_G0039402.1 mouse_genomes_project 17 36597887 36599832 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0048159.1 MGP_CBAJ_G0023713.1 mouse_genomes_project 17 80258818 81054477 - MGP_CBAJ_P0048159 Alk protein_coding protein_coding MGP_CBAJ_T0045353.1 MGP_CBAJ_G0022937.1 mouse_genomes_project 17 21857558 21875475 + MGP_CBAJ_P0045353 Zfp760 protein_coding protein_coding MGP_CBAJ_T0003657.1 MGP_CBAJ_G0003296.1 mouse_genomes_project 17 29425999 29435581 - antisense antisense MGP_CBAJ_T0045396.1 MGP_CBAJ_G0022956.1 mouse_genomes_project 17 24007651 24025889 + MGP_CBAJ_P0045396 protein_coding protein_coding MGP_CBAJ_T0045108.1 MGP_CBAJ_G0022836.1 mouse_genomes_project 17 6269494 6285740 + MGP_CBAJ_P0045108 protein_coding protein_coding MGP_CBAJ_T0045924.1 MGP_CBAJ_G0023089.1 mouse_genomes_project 17 27244868 27259842 + MGP_CBAJ_P0045924 Tmem8 protein_coding protein_coding MGP_CBAJ_T0045925.1 MGP_CBAJ_G0023089.1 mouse_genomes_project 17 27256029 27259842 + MGP_CBAJ_P0045925 Tmem8 protein_coding protein_coding MGP_CBAJ_T0003655.1 MGP_CBAJ_G0003294.1 mouse_genomes_project 17 28414872 28416640 - Itpr3os antisense antisense MGP_CBAJ_T0013065.1 MGP_CBAJ_G0011177.1 mouse_genomes_project 17 38741148 38741343 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013085.1 MGP_CBAJ_G0011197.1 mouse_genomes_project 17 41586922 41590601 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0046380.1 MGP_CBAJ_G0023193.1 mouse_genomes_project 17 33969423 33973204 + MGP_CBAJ_P0046380 Cryaa protein_coding protein_coding MGP_CBAJ_T0045413.1 MGP_CBAJ_G0022961.1 mouse_genomes_project 17 24365571 24375994 + MGP_CBAJ_P0045413 Ccdc64b protein_coding protein_coding MGP_CBAJ_T0045054.1 MGP_CBAJ_G0022813.1 mouse_genomes_project 17 4185600 4187615 - MGP_CBAJ_P0045054 Dynlt1c protein_coding protein_coding MGP_CBAJ_T0101690.1 MGP_CBAJ_G0039721.1 mouse_genomes_project 17 19869148 19870051 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0100242.1 MGP_CBAJ_G0038497.1 mouse_genomes_project 17 11410267 11410405 + Gm26130 snoRNA snoRNA MGP_CBAJ_T0045053.1 MGP_CBAJ_G0022812.1 mouse_genomes_project 17 4183892 4186886 - protein_coding retained_intron MGP_CBAJ_T0047793.1 MGP_CBAJ_G0023585.1 mouse_genomes_project 17 57405736 57503241 - MGP_CBAJ_P0047793 Satb1 protein_coding protein_coding MGP_CBAJ_T0047794.1 MGP_CBAJ_G0023585.1 mouse_genomes_project 17 57405737 57497177 - MGP_CBAJ_P0047794 Satb1 protein_coding protein_coding MGP_CBAJ_T0047795.1 MGP_CBAJ_G0023585.1 mouse_genomes_project 17 57408443 57503872 - MGP_CBAJ_P0047795 Satb1 protein_coding protein_coding MGP_CBAJ_T0047796.1 MGP_CBAJ_G0023585.1 mouse_genomes_project 17 57409002 57481438 - MGP_CBAJ_P0047796 Satb1 protein_coding protein_coding MGP_CBAJ_T0047797.1 MGP_CBAJ_G0023585.1 mouse_genomes_project 17 57409005 57497155 - MGP_CBAJ_P0047797 Satb1 protein_coding protein_coding MGP_CBAJ_T0047798.1 MGP_CBAJ_G0023585.1 mouse_genomes_project 17 57409021 57485523 - MGP_CBAJ_P0047798 Satb1 protein_coding protein_coding MGP_CBAJ_T0047799.1 MGP_CBAJ_G0023585.1 mouse_genomes_project 17 57409026 57483199 - MGP_CBAJ_P0047799 Satb1 protein_coding protein_coding MGP_CBAJ_T0047800.1 MGP_CBAJ_G0023585.1 mouse_genomes_project 17 57409538 57411817 - Satb1 protein_coding retained_intron MGP_CBAJ_T0047801.1 MGP_CBAJ_G0023585.1 mouse_genomes_project 17 57472848 57479651 - Satb1 protein_coding processed_transcript MGP_CBAJ_T0047802.1 MGP_CBAJ_G0023585.1 mouse_genomes_project 17 57474884 57491610 - MGP_CBAJ_P0047802 Satb1 protein_coding protein_coding MGP_CBAJ_T0047803.1 MGP_CBAJ_G0023585.1 mouse_genomes_project 17 57475881 57502588 - MGP_CBAJ_P0047803 Satb1 protein_coding protein_coding MGP_CBAJ_T0047804.1 MGP_CBAJ_G0023585.1 mouse_genomes_project 17 57477598 57481438 - Satb1 protein_coding retained_intron MGP_CBAJ_T0047805.1 MGP_CBAJ_G0023585.1 mouse_genomes_project 17 57479707 57497177 - MGP_CBAJ_P0047805 Satb1 protein_coding protein_coding MGP_CBAJ_T0047806.1 MGP_CBAJ_G0023585.1 mouse_genomes_project 17 57495228 57500086 - Satb1 protein_coding retained_intron MGP_CBAJ_T0100252.1 MGP_CBAJ_G0038507.1 mouse_genomes_project 17 38156776 38156910 - Gm23442 snoRNA snoRNA MGP_CBAJ_T0013064.1 MGP_CBAJ_G0011176.1 mouse_genomes_project 17 37924742 37925119 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0045890.1 MGP_CBAJ_G0023081.1 mouse_genomes_project 17 27012504 27029009 - MGP_CBAJ_P0045890 Pigq protein_coding protein_coding MGP_CBAJ_T0045891.1 MGP_CBAJ_G0023081.1 mouse_genomes_project 17 27012505 27033730 - Pigq protein_coding retained_intron MGP_CBAJ_T0045892.1 MGP_CBAJ_G0023081.1 mouse_genomes_project 17 27012505 27033895 - MGP_CBAJ_P0045892 Pigq protein_coding protein_coding MGP_CBAJ_T0045893.1 MGP_CBAJ_G0023081.1 mouse_genomes_project 17 27012505 27033782 - MGP_CBAJ_P0045893 Pigq protein_coding protein_coding MGP_CBAJ_T0045894.1 MGP_CBAJ_G0023081.1 mouse_genomes_project 17 27013573 27025579 - MGP_CBAJ_P0045894 Pigq protein_coding nonsense_mediated_decay MGP_CBAJ_T0045895.1 MGP_CBAJ_G0023081.1 mouse_genomes_project 17 27013680 27020794 - Pigq protein_coding retained_intron MGP_CBAJ_T0045896.1 MGP_CBAJ_G0023081.1 mouse_genomes_project 17 27013722 27027908 - MGP_CBAJ_P0045896 Pigq protein_coding protein_coding MGP_CBAJ_T0045897.1 MGP_CBAJ_G0023081.1 mouse_genomes_project 17 27019449 27020534 - Pigq protein_coding retained_intron MGP_CBAJ_T0045898.1 MGP_CBAJ_G0023081.1 mouse_genomes_project 17 27024773 27033782 - Pigq protein_coding retained_intron MGP_CBAJ_T0045899.1 MGP_CBAJ_G0023081.1 mouse_genomes_project 17 27025856 27033780 - MGP_CBAJ_P0045899 Pigq protein_coding protein_coding MGP_CBAJ_T0045900.1 MGP_CBAJ_G0023081.1 mouse_genomes_project 17 27028321 27033776 - Pigq protein_coding retained_intron MGP_CBAJ_T0045901.1 MGP_CBAJ_G0023081.1 mouse_genomes_project 17 27028927 27034705 - MGP_CBAJ_P0045901 Pigq protein_coding protein_coding MGP_CBAJ_T0045902.1 MGP_CBAJ_G0023081.1 mouse_genomes_project 17 27028981 27036353 - MGP_CBAJ_P0045902 Pigq protein_coding protein_coding MGP_CBAJ_T0045903.1 MGP_CBAJ_G0023081.1 mouse_genomes_project 17 27029110 27034675 - MGP_CBAJ_P0045903 Pigq protein_coding protein_coding MGP_CBAJ_T0100270.1 MGP_CBAJ_G0038525.1 mouse_genomes_project 17 97928463 97928597 - Gm26005 snoRNA snoRNA MGP_CBAJ_T0100268.1 MGP_CBAJ_G0038523.1 mouse_genomes_project 17 93102964 93103099 + Gm24240 snoRNA snoRNA MGP_CBAJ_T0046476.1 MGP_CBAJ_G0023222.1 mouse_genomes_project 17 35733061 35749306 - MGP_CBAJ_P0046476 protein_coding protein_coding MGP_CBAJ_T0045073.1 MGP_CBAJ_G0022825.1 mouse_genomes_project 17 5598371 5667202 - MGP_CBAJ_P0045073 Fndc1 protein_coding protein_coding MGP_CBAJ_T0045074.1 MGP_CBAJ_G0022825.1 mouse_genomes_project 17 5607952 5622227 - Fndc1 protein_coding processed_transcript MGP_CBAJ_T0045075.1 MGP_CBAJ_G0022825.1 mouse_genomes_project 17 5622509 5628754 - Fndc1 protein_coding retained_intron MGP_CBAJ_T0045076.1 MGP_CBAJ_G0022825.1 mouse_genomes_project 17 5643510 5692723 - MGP_CBAJ_P0045076 Fndc1 protein_coding protein_coding MGP_CBAJ_T0045077.1 MGP_CBAJ_G0022825.1 mouse_genomes_project 17 5663092 5692723 - MGP_CBAJ_P0045077 Fndc1 protein_coding protein_coding MGP_CBAJ_T0013047.1 MGP_CBAJ_G0011159.1 mouse_genomes_project 17 22147634 22148376 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013069.1 MGP_CBAJ_G0011181.1 mouse_genomes_project 17 39563891 39564107 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0048228.1 MGP_CBAJ_G0023740.1 mouse_genomes_project 17 88200417 88232686 - MGP_CBAJ_P0048228 Eif2ak2 protein_coding protein_coding MGP_CBAJ_T0048229.1 MGP_CBAJ_G0023740.1 mouse_genomes_project 17 88203460 88207087 - Eif2ak2 protein_coding processed_transcript MGP_CBAJ_T0048230.1 MGP_CBAJ_G0023740.1 mouse_genomes_project 17 88223920 88232661 - Eif2ak2 protein_coding processed_transcript MGP_CBAJ_T0048231.1 MGP_CBAJ_G0023740.1 mouse_genomes_project 17 88228245 88232667 - Eif2ak2 protein_coding processed_transcript MGP_CBAJ_T0011304.1 MGP_CBAJ_G0009442.1 mouse_genomes_project 17 53997371 53997629 - Gm23642 misc_RNA misc_RNA MGP_CBAJ_T0046398.1 MGP_CBAJ_G0023199.1 mouse_genomes_project 17 34549258 34665354 - MGP_CBAJ_P0046398 Brd4 protein_coding protein_coding MGP_CBAJ_T0046399.1 MGP_CBAJ_G0023199.1 mouse_genomes_project 17 34549258 34665347 - MGP_CBAJ_P0046399 Brd4 protein_coding protein_coding MGP_CBAJ_T0046400.1 MGP_CBAJ_G0023199.1 mouse_genomes_project 17 34549260 34665347 - MGP_CBAJ_P0046400 Brd4 protein_coding protein_coding MGP_CBAJ_T0046401.1 MGP_CBAJ_G0023199.1 mouse_genomes_project 17 34550734 34585413 - MGP_CBAJ_P0046401 Brd4 protein_coding unknown_likely_coding MGP_CBAJ_T0046402.1 MGP_CBAJ_G0023199.1 mouse_genomes_project 17 34557894 34665354 - MGP_CBAJ_P0046402 Brd4 protein_coding protein_coding MGP_CBAJ_T0046403.1 MGP_CBAJ_G0023199.1 mouse_genomes_project 17 34559656 34665367 - MGP_CBAJ_P0046403 Brd4 protein_coding protein_coding MGP_CBAJ_T0046404.1 MGP_CBAJ_G0023199.1 mouse_genomes_project 17 34566241 34666406 - MGP_CBAJ_P0046404 Brd4 protein_coding protein_coding MGP_CBAJ_T0046405.1 MGP_CBAJ_G0023199.1 mouse_genomes_project 17 34566276 34666361 - MGP_CBAJ_P0046405 Brd4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045744.1 MGP_CBAJ_G0023047.1 mouse_genomes_project 17 26241203 26254181 - MGP_CBAJ_P0045744 Ube2i protein_coding protein_coding MGP_CBAJ_T0045745.1 MGP_CBAJ_G0023047.1 mouse_genomes_project 17 26241208 26253259 - MGP_CBAJ_P0045745 Ube2i protein_coding protein_coding MGP_CBAJ_T0045746.1 MGP_CBAJ_G0023047.1 mouse_genomes_project 17 26241462 26254181 - MGP_CBAJ_P0045746 Ube2i protein_coding protein_coding MGP_CBAJ_T0045747.1 MGP_CBAJ_G0023047.1 mouse_genomes_project 17 26241466 26253790 - MGP_CBAJ_P0045747 Ube2i protein_coding protein_coding MGP_CBAJ_T0045748.1 MGP_CBAJ_G0023047.1 mouse_genomes_project 17 26241466 26245728 - MGP_CBAJ_P0045748 Ube2i protein_coding protein_coding MGP_CBAJ_T0045749.1 MGP_CBAJ_G0023047.1 mouse_genomes_project 17 26241593 26253410 - MGP_CBAJ_P0045749 Ube2i protein_coding protein_coding MGP_CBAJ_T0045750.1 MGP_CBAJ_G0023047.1 mouse_genomes_project 17 26242107 26254507 - MGP_CBAJ_P0045750 Ube2i protein_coding protein_coding MGP_CBAJ_T0045751.1 MGP_CBAJ_G0023047.1 mouse_genomes_project 17 26244187 26245195 - Ube2i protein_coding retained_intron MGP_CBAJ_T0045752.1 MGP_CBAJ_G0023047.1 mouse_genomes_project 17 26244868 26253466 - MGP_CBAJ_P0045752 Ube2i protein_coding protein_coding MGP_CBAJ_T0045753.1 MGP_CBAJ_G0023047.1 mouse_genomes_project 17 26246422 26253743 - MGP_CBAJ_P0045753 Ube2i protein_coding protein_coding MGP_CBAJ_T0045754.1 MGP_CBAJ_G0023047.1 mouse_genomes_project 17 26248264 26254173 - MGP_CBAJ_P0045754 Ube2i protein_coding protein_coding MGP_CBAJ_T0045755.1 MGP_CBAJ_G0023047.1 mouse_genomes_project 17 26249109 26253476 - MGP_CBAJ_P0045755 Ube2i protein_coding protein_coding MGP_CBAJ_T0045756.1 MGP_CBAJ_G0023047.1 mouse_genomes_project 17 26249258 26253031 - MGP_CBAJ_P0045756 Ube2i protein_coding protein_coding MGP_CBAJ_T0045757.1 MGP_CBAJ_G0023047.1 mouse_genomes_project 17 26252538 26253135 - Ube2i protein_coding processed_transcript MGP_CBAJ_T0046873.1 MGP_CBAJ_G0023309.1 mouse_genomes_project 17 37961799 37963919 + Lsm2 protein_coding retained_intron MGP_CBAJ_T0046874.1 MGP_CBAJ_G0023309.1 mouse_genomes_project 17 37961817 37965829 + MGP_CBAJ_P0046874 Lsm2 protein_coding protein_coding MGP_CBAJ_T0046875.1 MGP_CBAJ_G0023309.1 mouse_genomes_project 17 37961848 37965609 + Lsm2 protein_coding processed_transcript MGP_CBAJ_T0046876.1 MGP_CBAJ_G0023309.1 mouse_genomes_project 17 37962058 37965530 + Lsm2 protein_coding processed_transcript MGP_CBAJ_T0046877.1 MGP_CBAJ_G0023309.1 mouse_genomes_project 17 37962066 37965829 + MGP_CBAJ_P0046877 Lsm2 protein_coding protein_coding MGP_CBAJ_T0046878.1 MGP_CBAJ_G0023309.1 mouse_genomes_project 17 37962096 37965827 + Lsm2 protein_coding processed_transcript MGP_CBAJ_T0046879.1 MGP_CBAJ_G0023309.1 mouse_genomes_project 17 37962096 37965772 + Lsm2 protein_coding processed_transcript MGP_CBAJ_T0046880.1 MGP_CBAJ_G0023309.1 mouse_genomes_project 17 37962096 37965827 + MGP_CBAJ_P0046880 Lsm2 protein_coding protein_coding MGP_CBAJ_T0046881.1 MGP_CBAJ_G0023309.1 mouse_genomes_project 17 37962106 37965435 + Lsm2 protein_coding retained_intron MGP_CBAJ_T0046882.1 MGP_CBAJ_G0023309.1 mouse_genomes_project 17 37962146 37965435 + Lsm2 protein_coding retained_intron MGP_CBAJ_T0046883.1 MGP_CBAJ_G0023309.1 mouse_genomes_project 17 37964545 37965828 + Lsm2 protein_coding retained_intron MGP_CBAJ_T0046139.1 MGP_CBAJ_G0023137.1 mouse_genomes_project 17 29868057 29894045 - MGP_CBAJ_P0046139 Tead3 protein_coding protein_coding MGP_CBAJ_T0046140.1 MGP_CBAJ_G0023137.1 mouse_genomes_project 17 29868100 29894108 - Tead3 protein_coding retained_intron MGP_CBAJ_T0046141.1 MGP_CBAJ_G0023137.1 mouse_genomes_project 17 29869148 29883355 - MGP_CBAJ_P0046141 Tead3 protein_coding protein_coding MGP_CBAJ_T0046142.1 MGP_CBAJ_G0023137.1 mouse_genomes_project 17 29869934 29871818 - Tead3 protein_coding retained_intron MGP_CBAJ_T0046143.1 MGP_CBAJ_G0023137.1 mouse_genomes_project 17 29870351 29872747 - Tead3 protein_coding processed_transcript MGP_CBAJ_T0047972.1 MGP_CBAJ_G0023660.1 mouse_genomes_project 17 63710589 63724991 + MGP_CBAJ_P0047972 Trip10 protein_coding protein_coding MGP_CBAJ_T0047973.1 MGP_CBAJ_G0023660.1 mouse_genomes_project 17 63710686 63724442 + MGP_CBAJ_P0047973 Trip10 protein_coding unknown_likely_coding MGP_CBAJ_T0047742.1 MGP_CBAJ_G0023572.1 mouse_genomes_project 17 53642499 53672767 - MGP_CBAJ_P0047742 Nfya protein_coding protein_coding MGP_CBAJ_T0047743.1 MGP_CBAJ_G0023572.1 mouse_genomes_project 17 53642503 53672908 - MGP_CBAJ_P0047743 Nfya protein_coding protein_coding MGP_CBAJ_T0047744.1 MGP_CBAJ_G0023572.1 mouse_genomes_project 17 53642510 53672767 - MGP_CBAJ_P0047744 Nfya protein_coding protein_coding MGP_CBAJ_T0047745.1 MGP_CBAJ_G0023572.1 mouse_genomes_project 17 53644619 53656156 - MGP_CBAJ_P0047745 Nfya protein_coding protein_coding MGP_CBAJ_T0047746.1 MGP_CBAJ_G0023572.1 mouse_genomes_project 17 53644695 53672732 - MGP_CBAJ_P0047746 Nfya protein_coding protein_coding MGP_CBAJ_T0047747.1 MGP_CBAJ_G0023572.1 mouse_genomes_project 17 53644723 53648829 - MGP_CBAJ_P0047747 Nfya protein_coding protein_coding MGP_CBAJ_T0047748.1 MGP_CBAJ_G0023572.1 mouse_genomes_project 17 53644838 53649065 - MGP_CBAJ_P0047748 Nfya protein_coding protein_coding MGP_CBAJ_T0047749.1 MGP_CBAJ_G0023572.1 mouse_genomes_project 17 53646494 53647760 - Nfya protein_coding retained_intron MGP_CBAJ_T0047750.1 MGP_CBAJ_G0023572.1 mouse_genomes_project 17 53647630 53654650 - MGP_CBAJ_P0047750 Nfya protein_coding protein_coding MGP_CBAJ_T0047751.1 MGP_CBAJ_G0023572.1 mouse_genomes_project 17 53647658 53672743 - MGP_CBAJ_P0047751 Nfya protein_coding protein_coding MGP_CBAJ_T0047752.1 MGP_CBAJ_G0023572.1 mouse_genomes_project 17 53648823 53651666 - Nfya protein_coding retained_intron MGP_CBAJ_T0047753.1 MGP_CBAJ_G0023572.1 mouse_genomes_project 17 53650974 53672690 - Nfya protein_coding retained_intron MGP_CBAJ_T0047754.1 MGP_CBAJ_G0023572.1 mouse_genomes_project 17 53653538 53672752 - Nfya protein_coding retained_intron MGP_CBAJ_T0045361.1 MGP_CBAJ_G0022939.1 mouse_genomes_project 17 21977929 22010781 - MGP_CBAJ_P0045361 protein_coding protein_coding MGP_CBAJ_T0013073.1 MGP_CBAJ_G0011185.1 mouse_genomes_project 17 39632501 39632814 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099003.1 MGP_CBAJ_G0037258.1 mouse_genomes_project 17 56474351 56474468 - Gm25177 snRNA snRNA MGP_CBAJ_T0047612.1 MGP_CBAJ_G0023537.1 mouse_genomes_project 17 51750859 51790701 - MGP_CBAJ_P0047612 Gltscr1l protein_coding protein_coding MGP_CBAJ_T0046991.1 MGP_CBAJ_G0023331.1 mouse_genomes_project 17 38189500 38192783 - MGP_CBAJ_P0046991 Lst1 protein_coding protein_coding MGP_CBAJ_T0045298.1 MGP_CBAJ_G0022893.1 mouse_genomes_project 17 17727160 17768919 - MGP_CBAJ_P0045298 Vmn2r94 protein_coding protein_coding MGP_CBAJ_T0045485.1 MGP_CBAJ_G0022988.1 mouse_genomes_project 17 24853129 24879637 - MGP_CBAJ_P0045485 Kctd5 protein_coding protein_coding MGP_CBAJ_T0045486.1 MGP_CBAJ_G0022988.1 mouse_genomes_project 17 24862190 24874441 - Kctd5 protein_coding processed_transcript MGP_CBAJ_T0047758.1 MGP_CBAJ_G0023575.1 mouse_genomes_project 17 53715495 53719863 - Tspo2 protein_coding retained_intron MGP_CBAJ_T0047759.1 MGP_CBAJ_G0023575.1 mouse_genomes_project 17 53715976 53719893 - MGP_CBAJ_P0047759 Tspo2 protein_coding protein_coding MGP_CBAJ_T0047760.1 MGP_CBAJ_G0023575.1 mouse_genomes_project 17 53716060 53718445 - MGP_CBAJ_P0047760 Tspo2 protein_coding protein_coding MGP_CBAJ_T0047761.1 MGP_CBAJ_G0023575.1 mouse_genomes_project 17 53716109 53718442 - MGP_CBAJ_P0047761 Tspo2 protein_coding protein_coding MGP_CBAJ_T0047762.1 MGP_CBAJ_G0023575.1 mouse_genomes_project 17 53718307 53719888 - Tspo2 protein_coding processed_transcript MGP_CBAJ_T0048144.1 MGP_CBAJ_G0023707.1 mouse_genomes_project 17 79849521 79884160 - MGP_CBAJ_P0048144 Ndc80 protein_coding protein_coding MGP_CBAJ_T0048287.1 MGP_CBAJ_G0023767.1 mouse_genomes_project 17 91039469 91332098 - MGP_CBAJ_P0048287 Slc8a1 protein_coding protein_coding MGP_CBAJ_T0048288.1 MGP_CBAJ_G0023767.1 mouse_genomes_project 17 91039469 91332098 - MGP_CBAJ_P0048288 Slc8a1 protein_coding protein_coding MGP_CBAJ_T0048289.1 MGP_CBAJ_G0023767.1 mouse_genomes_project 17 91039469 91359393 - MGP_CBAJ_P0048289 Slc8a1 protein_coding unknown_likely_coding MGP_CBAJ_T0048290.1 MGP_CBAJ_G0023767.1 mouse_genomes_project 17 91039469 91332098 - MGP_CBAJ_P0048290 Slc8a1 protein_coding protein_coding MGP_CBAJ_T0048316.1 MGP_CBAJ_G0023778.1 mouse_genomes_project 17 94531179 94663530 + MGP_CBAJ_P0048316 Plekhh2 protein_coding unknown_likely_coding MGP_CBAJ_T0047203.1 MGP_CBAJ_G0023377.1 mouse_genomes_project 17 39642708 39652589 - MGP_CBAJ_P0047203 Trim39 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047204.1 MGP_CBAJ_G0023377.1 mouse_genomes_project 17 39642708 39655841 - MGP_CBAJ_P0047204 Trim39 protein_coding protein_coding MGP_CBAJ_T0047205.1 MGP_CBAJ_G0023377.1 mouse_genomes_project 17 39642708 39655404 - MGP_CBAJ_P0047205 Trim39 protein_coding protein_coding MGP_CBAJ_T0047206.1 MGP_CBAJ_G0023377.1 mouse_genomes_project 17 39642945 39653057 - MGP_CBAJ_P0047206 Trim39 protein_coding protein_coding MGP_CBAJ_T0047207.1 MGP_CBAJ_G0023377.1 mouse_genomes_project 17 39645367 39652532 - Trim39 protein_coding processed_transcript MGP_CBAJ_T0047208.1 MGP_CBAJ_G0023377.1 mouse_genomes_project 17 39646440 39655220 - Trim39 protein_coding processed_transcript MGP_CBAJ_T0047209.1 MGP_CBAJ_G0023377.1 mouse_genomes_project 17 39646442 39656084 - Trim39 protein_coding retained_intron MGP_CBAJ_T0047346.1 MGP_CBAJ_G0023450.1 mouse_genomes_project 17 42839271 42842619 - MGP_CBAJ_P0047346 Esp23 protein_coding protein_coding MGP_CBAJ_T0101697.1 MGP_CBAJ_G0039728.1 mouse_genomes_project 17 20972337 20973276 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0006807.1 MGP_CBAJ_G0005602.1 mouse_genomes_project 17 23259703 23293900 - Gm16386 lincRNA lincRNA MGP_CBAJ_T0097989.1 MGP_CBAJ_G0036262.1 mouse_genomes_project 17 88207040 88207159 + n-R5s29 rRNA rRNA MGP_CBAJ_T0047249.1 MGP_CBAJ_G0023394.1 mouse_genomes_project 17 40427340 40436398 + MGP_CBAJ_P0047249 Znrd1as protein_coding protein_coding MGP_CBAJ_T0047250.1 MGP_CBAJ_G0023394.1 mouse_genomes_project 17 40427367 40435691 + Znrd1as protein_coding retained_intron MGP_CBAJ_T0047251.1 MGP_CBAJ_G0023394.1 mouse_genomes_project 17 40427389 40436397 + MGP_CBAJ_P0047251 Znrd1as protein_coding protein_coding MGP_CBAJ_T0098993.1 MGP_CBAJ_G0037248.1 mouse_genomes_project 17 36596417 36596522 + Gm23111 snRNA snRNA MGP_CBAJ_T0045341.1 MGP_CBAJ_G0022928.1 mouse_genomes_project 17 21476310 21492258 + MGP_CBAJ_P0045341 Zfp677 protein_coding protein_coding MGP_CBAJ_T0045342.1 MGP_CBAJ_G0022928.1 mouse_genomes_project 17 21476310 21492255 + MGP_CBAJ_P0045342 Zfp677 protein_coding protein_coding MGP_CBAJ_T0000961.1 MGP_CBAJ_G0000893.1 mouse_genomes_project 17 79682817 79685609 - TEC TEC MGP_CBAJ_T0047428.1 MGP_CBAJ_G0023491.1 mouse_genomes_project 17 50284302 50294809 + MGP_CBAJ_P0047428 Tcte1 protein_coding unknown_likely_coding MGP_CBAJ_T0047841.1 MGP_CBAJ_G0023607.1 mouse_genomes_project 17 62199352 62213609 - MGP_CBAJ_P0047841 Stap2 protein_coding protein_coding MGP_CBAJ_T0045306.1 MGP_CBAJ_G0022900.1 mouse_genomes_project 17 19345203 19375710 + MGP_CBAJ_P0045306 Vmn2r100 protein_coding protein_coding MGP_CBAJ_T0045352.1 MGP_CBAJ_G0022936.1 mouse_genomes_project 17 21836643 21838219 + MGP_CBAJ_P0045352 Gm10226 protein_coding protein_coding MGP_CBAJ_T0006887.1 MGP_CBAJ_G0005661.1 mouse_genomes_project 17 95057218 95059961 - 1110020A21Rik lincRNA lincRNA MGP_CBAJ_T0010049.1 MGP_CBAJ_G0008187.1 mouse_genomes_project 17 17192640 17192710 + Mir99b miRNA miRNA MGP_CBAJ_T0101718.1 MGP_CBAJ_G0039749.1 mouse_genomes_project 17 37719568 37720964 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0006841.1 MGP_CBAJ_G0005629.1 mouse_genomes_project 17 37569129 37572262 - Gm20461 lincRNA lincRNA MGP_CBAJ_T0045436.1 MGP_CBAJ_G0022970.1 mouse_genomes_project 17 24453880 24461209 - MGP_CBAJ_P0045436 Kremen2 protein_coding protein_coding MGP_CBAJ_T0010098.1 MGP_CBAJ_G0008236.1 mouse_genomes_project 17 70620897 70620981 + Gm24813 miRNA miRNA MGP_CBAJ_T0047852.1 MGP_CBAJ_G0023610.1 mouse_genomes_project 17 62258528 62287849 + MGP_CBAJ_P0047852 Chaf1a protein_coding protein_coding MGP_CBAJ_T0045085.1 MGP_CBAJ_G0022832.1 mouse_genomes_project 17 6106105 6139624 + MGP_CBAJ_P0045085 Fgfr1op protein_coding protein_coding MGP_CBAJ_T0045086.1 MGP_CBAJ_G0022832.1 mouse_genomes_project 17 6106124 6116684 + Fgfr1op protein_coding retained_intron MGP_CBAJ_T0045087.1 MGP_CBAJ_G0022832.1 mouse_genomes_project 17 6106144 6139295 + MGP_CBAJ_P0045087 Fgfr1op protein_coding protein_coding MGP_CBAJ_T0045088.1 MGP_CBAJ_G0022832.1 mouse_genomes_project 17 6122830 6137765 + MGP_CBAJ_P0045088 Fgfr1op protein_coding protein_coding MGP_CBAJ_T0048145.1 MGP_CBAJ_G0023708.1 mouse_genomes_project 17 79913833 79942143 + MGP_CBAJ_P0048145 Spdya protein_coding protein_coding MGP_CBAJ_T0048146.1 MGP_CBAJ_G0023708.1 mouse_genomes_project 17 79913833 79952943 + MGP_CBAJ_P0048146 Spdya protein_coding protein_coding MGP_CBAJ_T0048147.1 MGP_CBAJ_G0023708.1 mouse_genomes_project 17 79913844 79952943 + MGP_CBAJ_P0048147 Spdya protein_coding protein_coding MGP_CBAJ_T0048148.1 MGP_CBAJ_G0023708.1 mouse_genomes_project 17 79917928 79952084 + MGP_CBAJ_P0048148 Spdya protein_coding protein_coding MGP_CBAJ_T0045879.1 MGP_CBAJ_G0023079.1 mouse_genomes_project 17 26956071 26958747 - MGP_CBAJ_P0045879 Wfikkn1 protein_coding protein_coding MGP_CBAJ_T0045880.1 MGP_CBAJ_G0023079.1 mouse_genomes_project 17 26957245 26958678 - MGP_CBAJ_P0045880 Wfikkn1 protein_coding protein_coding MGP_CBAJ_T0003704.1 MGP_CBAJ_G0003330.1 mouse_genomes_project 17 63452410 63457700 + Gm17168 antisense antisense MGP_CBAJ_T0000963.1 MGP_CBAJ_G0000895.1 mouse_genomes_project 17 89255497 89274910 - TEC TEC MGP_CBAJ_T0010079.1 MGP_CBAJ_G0008217.1 mouse_genomes_project 17 36693835 36693895 + Mir219c miRNA miRNA MGP_CBAJ_T0013121.1 MGP_CBAJ_G0011233.1 mouse_genomes_project 17 86937084 86939024 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0047294.1 MGP_CBAJ_G0023407.1 mouse_genomes_project 17 40781980 40783031 + MGP_CBAJ_P0047294 Olfr96 protein_coding protein_coding MGP_CBAJ_T0045326.1 MGP_CBAJ_G0022920.1 mouse_genomes_project 17 20949707 20950866 - MGP_CBAJ_P0045326 Vmn1r232 protein_coding protein_coding MGP_CBAJ_T0101702.1 MGP_CBAJ_G0039733.1 mouse_genomes_project 17 21351876 21352057 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099017.1 MGP_CBAJ_G0037272.1 mouse_genomes_project 17 97060261 97060371 - Gm22235 snRNA snRNA MGP_CBAJ_T0013032.1 MGP_CBAJ_G0011144.1 mouse_genomes_project 17 3292892 3293190 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0046532.1 MGP_CBAJ_G0023237.1 mouse_genomes_project 17 36312635 36335853 - MGP_CBAJ_P0046532 Rab11b protein_coding protein_coding MGP_CBAJ_T0046533.1 MGP_CBAJ_G0023237.1 mouse_genomes_project 17 36316993 36322074 - MGP_CBAJ_P0046533 Rab11b protein_coding protein_coding MGP_CBAJ_T0046534.1 MGP_CBAJ_G0023237.1 mouse_genomes_project 17 36321186 36335807 - Rab11b protein_coding processed_transcript MGP_CBAJ_T0000947.1 MGP_CBAJ_G0000880.1 mouse_genomes_project 17 32474691 32476155 + TEC TEC MGP_CBAJ_T0000948.1 MGP_CBAJ_G0000880.1 mouse_genomes_project 17 32475541 32475994 + TEC TEC MGP_CBAJ_T0011293.1 MGP_CBAJ_G0009431.1 mouse_genomes_project 17 17139345 17139631 + Gm23837 misc_RNA misc_RNA MGP_CBAJ_T0046711.1 MGP_CBAJ_G0023276.1 mouse_genomes_project 17 37145906 37154588 + MGP_CBAJ_P0046711 Btnl1 protein_coding protein_coding MGP_CBAJ_T0048007.1 MGP_CBAJ_G0023674.1 mouse_genomes_project 17 72312664 72318936 - MGP_CBAJ_P0048007 4930583I09Rik protein_coding protein_coding MGP_CBAJ_T0013109.1 MGP_CBAJ_G0011221.1 mouse_genomes_project 17 59956403 59957364 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099005.1 MGP_CBAJ_G0037260.1 mouse_genomes_project 17 64262567 64262679 + Gm25102 snRNA snRNA MGP_CBAJ_T0046199.1 MGP_CBAJ_G0023150.1 mouse_genomes_project 17 30584640 30608280 - MGP_CBAJ_P0046199 4930539E08Rik protein_coding unknown_likely_coding MGP_CBAJ_T0046200.1 MGP_CBAJ_G0023150.1 mouse_genomes_project 17 30584653 30608371 - MGP_CBAJ_P0046200 4930539E08Rik protein_coding protein_coding MGP_CBAJ_T0047613.1 MGP_CBAJ_G0023538.1 mouse_genomes_project 17 51863968 51865158 - MGP_CBAJ_P0047613 A330017A19Rik protein_coding protein_coding MGP_CBAJ_T0045290.1 MGP_CBAJ_G0022887.1 mouse_genomes_project 17 17205800 17217635 - MGP_CBAJ_P0045290 Has1 protein_coding protein_coding MGP_CBAJ_T0045466.1 MGP_CBAJ_G0022980.1 mouse_genomes_project 17 24664124 24694720 + MGP_CBAJ_P0045466 protein_coding protein_coding MGP_CBAJ_T0045468.1 MGP_CBAJ_G0022980.1 mouse_genomes_project 17 24692690 24694743 + MGP_CBAJ_P0045468 protein_coding protein_coding MGP_CBAJ_T0047299.1 MGP_CBAJ_G0023412.1 mouse_genomes_project 17 40897496 40911805 - MGP_CBAJ_P0047299 protein_coding protein_coding MGP_CBAJ_T0047538.1 MGP_CBAJ_G0023512.1 mouse_genomes_project 17 51115370 51140401 - MGP_CBAJ_P0047538 Tjap1 protein_coding protein_coding MGP_CBAJ_T0047539.1 MGP_CBAJ_G0023512.1 mouse_genomes_project 17 51115370 51140401 - MGP_CBAJ_P0047539 Tjap1 protein_coding protein_coding MGP_CBAJ_T0047540.1 MGP_CBAJ_G0023512.1 mouse_genomes_project 17 51115370 51140401 - MGP_CBAJ_P0047540 Tjap1 protein_coding protein_coding MGP_CBAJ_T0047541.1 MGP_CBAJ_G0023512.1 mouse_genomes_project 17 51118243 51124561 - MGP_CBAJ_P0047541 Tjap1 protein_coding unknown_likely_coding MGP_CBAJ_T0046866.1 MGP_CBAJ_G0023304.1 mouse_genomes_project 17 37894022 37898691 + MGP_CBAJ_P0046866 Neu1 protein_coding protein_coding MGP_CBAJ_T0046867.1 MGP_CBAJ_G0023304.1 mouse_genomes_project 17 37894083 37900382 + Neu1 protein_coding retained_intron MGP_CBAJ_T0046868.1 MGP_CBAJ_G0023304.1 mouse_genomes_project 17 37894632 37895535 + Neu1 protein_coding retained_intron MGP_CBAJ_T0047631.1 MGP_CBAJ_G0023545.1 mouse_genomes_project 17 52458082 52464084 - MGP_CBAJ_P0047631 Guca1a protein_coding protein_coding MGP_CBAJ_T0045814.1 MGP_CBAJ_G0023065.1 mouse_genomes_project 17 26836195 26841893 - MGP_CBAJ_P0045814 Haghl protein_coding protein_coding MGP_CBAJ_T0045815.1 MGP_CBAJ_G0023065.1 mouse_genomes_project 17 26839142 26841688 - Haghl protein_coding retained_intron MGP_CBAJ_T0045816.1 MGP_CBAJ_G0023065.1 mouse_genomes_project 17 26839154 26841885 - Haghl protein_coding retained_intron MGP_CBAJ_T0045817.1 MGP_CBAJ_G0023065.1 mouse_genomes_project 17 26839166 26841461 - MGP_CBAJ_P0045817 Haghl protein_coding protein_coding MGP_CBAJ_T0045818.1 MGP_CBAJ_G0023065.1 mouse_genomes_project 17 26839892 26841920 - Haghl protein_coding retained_intron MGP_CBAJ_T0045819.1 MGP_CBAJ_G0023065.1 mouse_genomes_project 17 26840181 26841919 - Haghl protein_coding retained_intron MGP_CBAJ_T0045820.1 MGP_CBAJ_G0023065.1 mouse_genomes_project 17 26840485 26841658 - Haghl protein_coding retained_intron MGP_CBAJ_T0045821.1 MGP_CBAJ_G0023065.1 mouse_genomes_project 17 26840668 26841896 - MGP_CBAJ_P0045821 Haghl protein_coding protein_coding MGP_CBAJ_T0017321.1 MGP_CBAJ_G0015093.1 mouse_genomes_project 17 40806397 40808406 + Gm20429 processed_transcript retained_intron MGP_CBAJ_T0017322.1 MGP_CBAJ_G0015093.1 mouse_genomes_project 17 40807786 40823205 + Gm20429 processed_transcript antisense MGP_CBAJ_T0047945.1 MGP_CBAJ_G0023646.1 mouse_genomes_project 17 63407276 63407838 - MGP_CBAJ_P0047945 Pspn protein_coding protein_coding MGP_CBAJ_T0048267.1 MGP_CBAJ_G0023755.1 mouse_genomes_project 17 89727320 89739966 + MGP_CBAJ_P0048267 Ttc39d protein_coding protein_coding MGP_CBAJ_T0048268.1 MGP_CBAJ_G0023755.1 mouse_genomes_project 17 89737943 89739965 + MGP_CBAJ_P0048268 Ttc39d protein_coding protein_coding MGP_CBAJ_T0047379.1 MGP_CBAJ_G0023475.1 mouse_genomes_project 17 47910558 47976255 + MGP_CBAJ_P0047379 Adgrf5 protein_coding unknown_likely_coding MGP_CBAJ_T0047380.1 MGP_CBAJ_G0023475.1 mouse_genomes_project 17 47910597 47980481 + MGP_CBAJ_P0047380 Adgrf5 protein_coding protein_coding MGP_CBAJ_T0045243.1 MGP_CBAJ_G0022878.1 mouse_genomes_project 17 14404999 14412771 + MGP_CBAJ_P0045243 Tbp protein_coding protein_coding MGP_CBAJ_T0045244.1 MGP_CBAJ_G0022878.1 mouse_genomes_project 17 14404999 14432181 + MGP_CBAJ_P0045244 Tbp protein_coding protein_coding MGP_CBAJ_T0045245.1 MGP_CBAJ_G0022878.1 mouse_genomes_project 17 14404999 14443971 + MGP_CBAJ_P0045245 Tbp protein_coding protein_coding MGP_CBAJ_T0045246.1 MGP_CBAJ_G0022878.1 mouse_genomes_project 17 14405012 14415623 + MGP_CBAJ_P0045246 Tbp protein_coding protein_coding MGP_CBAJ_T0045247.1 MGP_CBAJ_G0022878.1 mouse_genomes_project 17 14405021 14432181 + MGP_CBAJ_P0045247 Tbp protein_coding protein_coding MGP_CBAJ_T0045248.1 MGP_CBAJ_G0022878.1 mouse_genomes_project 17 14405023 14415528 + MGP_CBAJ_P0045248 Tbp protein_coding protein_coding MGP_CBAJ_T0045249.1 MGP_CBAJ_G0022878.1 mouse_genomes_project 17 14405033 14422557 + MGP_CBAJ_P0045249 Tbp protein_coding protein_coding MGP_CBAJ_T0045250.1 MGP_CBAJ_G0022878.1 mouse_genomes_project 17 14405039 14412613 + MGP_CBAJ_P0045250 Tbp protein_coding protein_coding MGP_CBAJ_T0045251.1 MGP_CBAJ_G0022878.1 mouse_genomes_project 17 14405071 14432181 + MGP_CBAJ_P0045251 Tbp protein_coding protein_coding MGP_CBAJ_T0045252.1 MGP_CBAJ_G0022878.1 mouse_genomes_project 17 14412748 14431622 + MGP_CBAJ_P0045252 Tbp protein_coding protein_coding MGP_CBAJ_T0045253.1 MGP_CBAJ_G0022878.1 mouse_genomes_project 17 14423668 14431689 + Tbp protein_coding retained_intron MGP_CBAJ_T0045174.1 MGP_CBAJ_G0022857.1 mouse_genomes_project 17 11406418 11408797 + Tcp1 protein_coding processed_transcript MGP_CBAJ_T0045175.1 MGP_CBAJ_G0022857.1 mouse_genomes_project 17 11407156 11409062 + MGP_CBAJ_P0045175 Tcp1 protein_coding protein_coding MGP_CBAJ_T0045176.1 MGP_CBAJ_G0022857.1 mouse_genomes_project 17 11407166 11410911 + Tcp1 protein_coding retained_intron MGP_CBAJ_T0045177.1 MGP_CBAJ_G0022857.1 mouse_genomes_project 17 11407166 11415225 + Tcp1 protein_coding retained_intron MGP_CBAJ_T0045178.1 MGP_CBAJ_G0022857.1 mouse_genomes_project 17 11407192 11410241 + Tcp1 protein_coding retained_intron MGP_CBAJ_T0045179.1 MGP_CBAJ_G0022857.1 mouse_genomes_project 17 11407283 11415159 + MGP_CBAJ_P0045179 Tcp1 protein_coding protein_coding MGP_CBAJ_T0045180.1 MGP_CBAJ_G0022857.1 mouse_genomes_project 17 11410355 11411323 + Tcp1 protein_coding retained_intron MGP_CBAJ_T0045181.1 MGP_CBAJ_G0022857.1 mouse_genomes_project 17 11410799 11413415 + Tcp1 protein_coding retained_intron MGP_CBAJ_T0045182.1 MGP_CBAJ_G0022857.1 mouse_genomes_project 17 11410963 11411831 + Tcp1 protein_coding retained_intron MGP_CBAJ_T0047927.1 MGP_CBAJ_G0023634.1 mouse_genomes_project 17 63069363 63076639 - MGP_CBAJ_P0047927 Vmac protein_coding protein_coding MGP_CBAJ_T0047928.1 MGP_CBAJ_G0023634.1 mouse_genomes_project 17 63069363 63075861 - MGP_CBAJ_P0047928 Vmac protein_coding protein_coding MGP_CBAJ_T0048064.1 MGP_CBAJ_G0023692.1 mouse_genomes_project 17 75674334 75868852 - MGP_CBAJ_P0048064 Arhgap28 protein_coding protein_coding MGP_CBAJ_T0048065.1 MGP_CBAJ_G0023692.1 mouse_genomes_project 17 75677356 75746265 - MGP_CBAJ_P0048065 Arhgap28 protein_coding protein_coding MGP_CBAJ_T0048066.1 MGP_CBAJ_G0023692.1 mouse_genomes_project 17 75690770 75713002 - MGP_CBAJ_P0048066 Arhgap28 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048067.1 MGP_CBAJ_G0023692.1 mouse_genomes_project 17 75708915 75738810 - MGP_CBAJ_P0048067 Arhgap28 protein_coding protein_coding MGP_CBAJ_T0011309.1 MGP_CBAJ_G0009447.1 mouse_genomes_project 17 89716018 89716265 - Gm25706 misc_RNA misc_RNA MGP_CBAJ_T0003678.1 MGP_CBAJ_G0003309.1 mouse_genomes_project 17 37529495 37529920 + Gm20463 antisense antisense MGP_CBAJ_T0047105.1 MGP_CBAJ_G0023359.1 mouse_genomes_project 17 39090987 39111756 + MGP_CBAJ_P0047105 Mdc1 protein_coding protein_coding MGP_CBAJ_T0047106.1 MGP_CBAJ_G0023359.1 mouse_genomes_project 17 39091114 39111762 + MGP_CBAJ_P0047106 Mdc1 protein_coding unknown_likely_coding MGP_CBAJ_T0047107.1 MGP_CBAJ_G0023359.1 mouse_genomes_project 17 39091148 39095423 + MGP_CBAJ_P0047107 Mdc1 protein_coding protein_coding MGP_CBAJ_T0003668.1 MGP_CBAJ_G0003303.1 mouse_genomes_project 17 35294737 35295935 + Gm17115 antisense antisense MGP_CBAJ_T0010077.1 MGP_CBAJ_G0008215.1 mouse_genomes_project 17 36504393 36504451 - Gm27775 miRNA miRNA MGP_CBAJ_T0047385.1 MGP_CBAJ_G0023477.1 mouse_genomes_project 17 48050844 48060736 - MGP_CBAJ_P0047385 Ankrd66 protein_coding protein_coding MGP_CBAJ_T0013055.1 MGP_CBAJ_G0011167.1 mouse_genomes_project 17 28899283 28899552 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0047596.1 MGP_CBAJ_G0023529.1 mouse_genomes_project 17 51603946 51612103 + MGP_CBAJ_P0047596 Mea1 protein_coding protein_coding MGP_CBAJ_T0047468.1 MGP_CBAJ_G0023498.1 mouse_genomes_project 17 50405906 50432475 - MGP_CBAJ_P0047468 Capn11 protein_coding protein_coding MGP_CBAJ_T0047469.1 MGP_CBAJ_G0023498.1 mouse_genomes_project 17 50421389 50432447 - MGP_CBAJ_P0047469 Capn11 protein_coding non_stop_decay MGP_CBAJ_T0045184.1 MGP_CBAJ_G0022859.1 mouse_genomes_project 17 11436170 11468835 - MGP_CBAJ_P0045184 protein_coding protein_coding MGP_CBAJ_T0045185.1 MGP_CBAJ_G0022859.1 mouse_genomes_project 17 11437683 11462791 - protein_coding processed_transcript MGP_CBAJ_T0045642.1 MGP_CBAJ_G0023029.1 mouse_genomes_project 17 25816315 25824866 + MGP_CBAJ_P0045642 Spsb3 protein_coding protein_coding MGP_CBAJ_T0045643.1 MGP_CBAJ_G0023029.1 mouse_genomes_project 17 25816343 25820102 + MGP_CBAJ_P0045643 Spsb3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045644.1 MGP_CBAJ_G0023029.1 mouse_genomes_project 17 25816375 25821209 + MGP_CBAJ_P0045644 Spsb3 protein_coding protein_coding MGP_CBAJ_T0045645.1 MGP_CBAJ_G0023029.1 mouse_genomes_project 17 25816378 25824856 + MGP_CBAJ_P0045645 Spsb3 protein_coding protein_coding MGP_CBAJ_T0045646.1 MGP_CBAJ_G0023029.1 mouse_genomes_project 17 25816400 25824871 + Spsb3 protein_coding retained_intron MGP_CBAJ_T0045647.1 MGP_CBAJ_G0023029.1 mouse_genomes_project 17 25816790 25824868 + MGP_CBAJ_P0045647 Spsb3 protein_coding protein_coding MGP_CBAJ_T0045648.1 MGP_CBAJ_G0023029.1 mouse_genomes_project 17 25817487 25819946 + MGP_CBAJ_P0045648 Spsb3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0006864.1 MGP_CBAJ_G0005645.1 mouse_genomes_project 17 55745054 55752210 + AY702103 lincRNA lincRNA MGP_CBAJ_T0006865.1 MGP_CBAJ_G0005645.1 mouse_genomes_project 17 55745250 55747371 + AY702103 lincRNA lincRNA MGP_CBAJ_T0013060.1 MGP_CBAJ_G0011172.1 mouse_genomes_project 17 36744117 36746529 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0047044.1 MGP_CBAJ_G0023348.1 mouse_genomes_project 17 38729356 38734406 + MGP_CBAJ_P0047044 Cdsn protein_coding protein_coding MGP_CBAJ_T0101689.1 MGP_CBAJ_G0039720.1 mouse_genomes_project 17 19763269 19805209 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0048380.1 MGP_CBAJ_G0023802.1 mouse_genomes_project 17 97904032 97918942 - MGP_CBAJ_P0048380 Calm2 protein_coding unknown_likely_coding MGP_CBAJ_T0048381.1 MGP_CBAJ_G0023802.1 mouse_genomes_project 17 97904899 97918996 - Calm2 protein_coding retained_intron MGP_CBAJ_T0101712.1 MGP_CBAJ_G0039743.1 mouse_genomes_project 17 37160123 37166888 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0098995.1 MGP_CBAJ_G0037250.1 mouse_genomes_project 17 38924242 38924349 - Gm23864 snRNA snRNA MGP_CBAJ_T0098989.1 MGP_CBAJ_G0037244.1 mouse_genomes_project 17 32253745 32253818 + Gm25049 snRNA snRNA MGP_CBAJ_T0013103.1 MGP_CBAJ_G0011215.1 mouse_genomes_project 17 59586530 59587531 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0046234.1 MGP_CBAJ_G0023158.1 mouse_genomes_project 17 30917407 31005226 - MGP_CBAJ_P0046234 Cpne5 protein_coding protein_coding MGP_CBAJ_T0046235.1 MGP_CBAJ_G0023158.1 mouse_genomes_project 17 30918773 30944788 - Cpne5 protein_coding processed_transcript MGP_CBAJ_T0046236.1 MGP_CBAJ_G0023158.1 mouse_genomes_project 17 30930099 30937368 - Cpne5 protein_coding processed_transcript MGP_CBAJ_T0046237.1 MGP_CBAJ_G0023158.1 mouse_genomes_project 17 30948994 31005188 - MGP_CBAJ_P0046237 Cpne5 protein_coding protein_coding MGP_CBAJ_T0046238.1 MGP_CBAJ_G0023158.1 mouse_genomes_project 17 30985494 31005141 - Cpne5 protein_coding retained_intron MGP_CBAJ_T0000953.1 MGP_CBAJ_G0000885.1 mouse_genomes_project 17 57435908 57440687 - TEC TEC MGP_CBAJ_T0013097.1 MGP_CBAJ_G0011209.1 mouse_genomes_project 17 59153314 59153908 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006851.1 MGP_CBAJ_G0005637.1 mouse_genomes_project 17 40711943 40734007 - Gm20497 lincRNA lincRNA MGP_CBAJ_T0098996.1 MGP_CBAJ_G0037251.1 mouse_genomes_project 17 40831300 40831463 - Gm25104 snRNA snRNA MGP_CBAJ_T0101413.1 MGP_CBAJ_G0039464.1 mouse_genomes_project 17 45057790 45073839 + unitary_pseudogene unitary_pseudogene MGP_CBAJ_T0013093.1 MGP_CBAJ_G0011205.1 mouse_genomes_project 17 50199707 50202707 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0045483.1 MGP_CBAJ_G0022986.1 mouse_genomes_project 17 24827321 24830354 + MGP_CBAJ_P0045483 Gm5225 protein_coding protein_coding MGP_CBAJ_T0047974.1 MGP_CBAJ_G0023661.1 mouse_genomes_project 17 63753274 63807757 + MGP_CBAJ_P0047974 Vav1 protein_coding protein_coding MGP_CBAJ_T0047975.1 MGP_CBAJ_G0023661.1 mouse_genomes_project 17 63753274 63807838 + MGP_CBAJ_P0047975 Vav1 protein_coding protein_coding MGP_CBAJ_T0047976.1 MGP_CBAJ_G0023661.1 mouse_genomes_project 17 63753301 63807762 + MGP_CBAJ_P0047976 Vav1 protein_coding protein_coding MGP_CBAJ_T0047977.1 MGP_CBAJ_G0023661.1 mouse_genomes_project 17 63780102 63782444 + Vav1 protein_coding retained_intron MGP_CBAJ_T0047978.1 MGP_CBAJ_G0023661.1 mouse_genomes_project 17 63789136 63807760 + Vav1 protein_coding processed_transcript MGP_CBAJ_T0010060.1 MGP_CBAJ_G0008198.1 mouse_genomes_project 17 26801865 26801957 - Gm25083 miRNA miRNA MGP_CBAJ_T0045335.1 MGP_CBAJ_G0022923.1 mouse_genomes_project 17 21054122 21081385 + MGP_CBAJ_P0045335 Zfp160 protein_coding protein_coding MGP_CBAJ_T0047939.1 MGP_CBAJ_G0023642.1 mouse_genomes_project 17 63277773 63320960 - MGP_CBAJ_P0047939 Mllt1 protein_coding protein_coding MGP_CBAJ_T0045112.1 MGP_CBAJ_G0022837.1 mouse_genomes_project 17 6292344 6296078 + MGP_CBAJ_P0045112 Prr18 protein_coding protein_coding MGP_CBAJ_T0045113.1 MGP_CBAJ_G0022837.1 mouse_genomes_project 17 6292677 6296078 + MGP_CBAJ_P0045113 Prr18 protein_coding protein_coding MGP_CBAJ_T0045167.1 MGP_CBAJ_G0022854.1 mouse_genomes_project 17 11364071 11365880 + MGP_CBAJ_P0045167 Mrgprh protein_coding protein_coding MGP_CBAJ_T0047565.1 MGP_CBAJ_G0023518.1 mouse_genomes_project 17 51326580 51328936 - MGP_CBAJ_P0047565 Gm5093 protein_coding protein_coding MGP_CBAJ_T0010066.1 MGP_CBAJ_G0008204.1 mouse_genomes_project 17 28230364 28230428 - Mir3083 miRNA miRNA MGP_CBAJ_T0047823.1 MGP_CBAJ_G0023593.1 mouse_genomes_project 17 59913300 59944750 - MGP_CBAJ_P0047823 Sult1c1 protein_coding protein_coding MGP_CBAJ_T0045297.1 MGP_CBAJ_G0022892.1 mouse_genomes_project 17 17450982 20379206 + MGP_CBAJ_P0045297 Vmn2r124 protein_coding protein_coding MGP_CBAJ_T0045372.1 MGP_CBAJ_G0022945.1 mouse_genomes_project 17 22463215 22469454 - MGP_CBAJ_P0045372 protein_coding protein_coding MGP_CBAJ_T0046407.1 MGP_CBAJ_G0023201.1 mouse_genomes_project 17 34717435 34746565 - MGP_CBAJ_P0046407 Akap8l protein_coding protein_coding MGP_CBAJ_T0101708.1 MGP_CBAJ_G0039739.1 mouse_genomes_project 17 36484286 36487213 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013107.1 MGP_CBAJ_G0011219.1 mouse_genomes_project 17 59832502 59833629 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0003650.1 MGP_CBAJ_G0003290.1 mouse_genomes_project 17 25408045 25408545 + Rab26os antisense antisense MGP_CBAJ_T0003651.1 MGP_CBAJ_G0003290.1 mouse_genomes_project 17 25408064 25408544 + Rab26os antisense antisense MGP_CBAJ_T0013106.1 MGP_CBAJ_G0011218.1 mouse_genomes_project 17 59801505 59801889 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0003698.1 MGP_CBAJ_G0003326.1 mouse_genomes_project 17 52800168 52802194 - Frs3os antisense antisense MGP_CBAJ_T0003699.1 MGP_CBAJ_G0003326.1 mouse_genomes_project 17 52800237 52801027 - Frs3os antisense antisense MGP_CBAJ_T0003700.1 MGP_CBAJ_G0003326.1 mouse_genomes_project 17 52800520 52802177 - Frs3os antisense antisense MGP_CBAJ_T0045154.1 MGP_CBAJ_G0022851.1 mouse_genomes_project 17 11098186 11133562 - MGP_CBAJ_P0045154 Slc22a1 protein_coding protein_coding MGP_CBAJ_T0045593.1 MGP_CBAJ_G0023009.1 mouse_genomes_project 17 25486601 25525424 - MGP_CBAJ_P0045593 Tsc2 protein_coding protein_coding MGP_CBAJ_T0045594.1 MGP_CBAJ_G0023009.1 mouse_genomes_project 17 25487173 25525395 - MGP_CBAJ_P0045594 Tsc2 protein_coding unknown_likely_coding MGP_CBAJ_T0046038.1 MGP_CBAJ_G0023118.1 mouse_genomes_project 17 28943255 28953791 + MGP_CBAJ_P0046038 protein_coding protein_coding MGP_CBAJ_T0046039.1 MGP_CBAJ_G0023118.1 mouse_genomes_project 17 28943258 28953785 + MGP_CBAJ_P0046039 protein_coding protein_coding MGP_CBAJ_T0046040.1 MGP_CBAJ_G0023118.1 mouse_genomes_project 17 28943276 28953142 + MGP_CBAJ_P0046040 protein_coding protein_coding MGP_CBAJ_T0046041.1 MGP_CBAJ_G0023118.1 mouse_genomes_project 17 28943303 28953177 + MGP_CBAJ_P0046041 protein_coding protein_coding MGP_CBAJ_T0046042.1 MGP_CBAJ_G0023118.1 mouse_genomes_project 17 28943303 28953780 + MGP_CBAJ_P0046042 protein_coding protein_coding MGP_CBAJ_T0046043.1 MGP_CBAJ_G0023118.1 mouse_genomes_project 17 28943620 28953787 + MGP_CBAJ_P0046043 protein_coding unknown_likely_coding MGP_CBAJ_T0003628.1 MGP_CBAJ_G0003280.1 mouse_genomes_project 17 2754656 2787408 + Gm29050 antisense antisense MGP_CBAJ_T0003629.1 MGP_CBAJ_G0003280.1 mouse_genomes_project 17 2771696 2789664 + Gm29050 antisense antisense MGP_CBAJ_T0048076.1 MGP_CBAJ_G0023696.1 mouse_genomes_project 17 77469138 77525488 + MGP_CBAJ_P0048076 Akain1 protein_coding protein_coding MGP_CBAJ_T0013123.1 MGP_CBAJ_G0011235.1 mouse_genomes_project 17 88198199 88199810 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0045389.1 MGP_CBAJ_G0022952.1 mouse_genomes_project 17 23568676 23594579 + MGP_CBAJ_P0045389 Vmn2r-ps130 protein_coding protein_coding MGP_CBAJ_T0045545.1 MGP_CBAJ_G0022999.1 mouse_genomes_project 17 25283910 25300141 + MGP_CBAJ_P0045545 Eci1 protein_coding protein_coding MGP_CBAJ_T0047937.1 MGP_CBAJ_G0023641.1 mouse_genomes_project 17 63254669 63274040 + MGP_CBAJ_P0047937 1700061G19Rik protein_coding protein_coding MGP_CBAJ_T0047938.1 MGP_CBAJ_G0023641.1 mouse_genomes_project 17 63254695 63257011 + 1700061G19Rik protein_coding retained_intron MGP_CBAJ_T0046470.1 MGP_CBAJ_G0023219.1 mouse_genomes_project 17 35591822 35595731 - MGP_CBAJ_P0046470 4921501E09Rik protein_coding protein_coding MGP_CBAJ_T0006833.1 MGP_CBAJ_G0005621.1 mouse_genomes_project 17 34448807 34488005 + Gm17276 lincRNA lincRNA MGP_CBAJ_T0013092.1 MGP_CBAJ_G0011204.1 mouse_genomes_project 17 45610503 45611504 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0045595.1 MGP_CBAJ_G0023010.1 mouse_genomes_project 17 25525476 25531618 + MGP_CBAJ_P0045595 Nthl1 protein_coding protein_coding MGP_CBAJ_T0011682.1 MGP_CBAJ_G0009813.1 mouse_genomes_project 17 24205468 24208119 - MGP_CBAJ_P0011682 Casp16-ps polymorphic_pseudogene polymorphic_pseudogene MGP_CBAJ_T0011683.1 MGP_CBAJ_G0009813.1 mouse_genomes_project 17 24205576 24208041 - MGP_CBAJ_P0011683 Casp16-ps polymorphic_pseudogene protein_coding MGP_CBAJ_T0046962.1 MGP_CBAJ_G0023328.1 mouse_genomes_project 17 38129562 38141702 + MGP_CBAJ_P0046962 Bag6 protein_coding protein_coding MGP_CBAJ_T0046963.1 MGP_CBAJ_G0023328.1 mouse_genomes_project 17 38129562 38141719 + MGP_CBAJ_P0046963 Bag6 protein_coding protein_coding MGP_CBAJ_T0046964.1 MGP_CBAJ_G0023328.1 mouse_genomes_project 17 38129589 38141703 + MGP_CBAJ_P0046964 Bag6 protein_coding protein_coding MGP_CBAJ_T0046965.1 MGP_CBAJ_G0023328.1 mouse_genomes_project 17 38129612 38134694 + MGP_CBAJ_P0046965 Bag6 protein_coding protein_coding MGP_CBAJ_T0046966.1 MGP_CBAJ_G0023328.1 mouse_genomes_project 17 38129870 38136992 + MGP_CBAJ_P0046966 Bag6 protein_coding protein_coding MGP_CBAJ_T0046967.1 MGP_CBAJ_G0023328.1 mouse_genomes_project 17 38129894 38134757 + MGP_CBAJ_P0046967 Bag6 protein_coding protein_coding MGP_CBAJ_T0046968.1 MGP_CBAJ_G0023328.1 mouse_genomes_project 17 38130102 38133090 + MGP_CBAJ_P0046968 Bag6 protein_coding protein_coding MGP_CBAJ_T0046969.1 MGP_CBAJ_G0023328.1 mouse_genomes_project 17 38130114 38140746 + MGP_CBAJ_P0046969 Bag6 protein_coding protein_coding MGP_CBAJ_T0046970.1 MGP_CBAJ_G0023328.1 mouse_genomes_project 17 38130128 38141717 + MGP_CBAJ_P0046970 Bag6 protein_coding protein_coding MGP_CBAJ_T0046971.1 MGP_CBAJ_G0023328.1 mouse_genomes_project 17 38130507 38133350 + Bag6 protein_coding retained_intron MGP_CBAJ_T0046972.1 MGP_CBAJ_G0023328.1 mouse_genomes_project 17 38132957 38134235 + Bag6 protein_coding retained_intron MGP_CBAJ_T0046973.1 MGP_CBAJ_G0023328.1 mouse_genomes_project 17 38134615 38135790 + Bag6 protein_coding retained_intron MGP_CBAJ_T0046974.1 MGP_CBAJ_G0023328.1 mouse_genomes_project 17 38135558 38136383 + Bag6 protein_coding retained_intron MGP_CBAJ_T0046975.1 MGP_CBAJ_G0023328.1 mouse_genomes_project 17 38136373 38136999 + Bag6 protein_coding retained_intron MGP_CBAJ_T0046976.1 MGP_CBAJ_G0023328.1 mouse_genomes_project 17 38140284 38141716 + MGP_CBAJ_P0046976 Bag6 protein_coding protein_coding MGP_CBAJ_T0046977.1 MGP_CBAJ_G0023328.1 mouse_genomes_project 17 38140773 38141693 + Bag6 protein_coding retained_intron MGP_CBAJ_T0013041.1 MGP_CBAJ_G0011153.1 mouse_genomes_project 17 13767122 13767861 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0046944.1 MGP_CBAJ_G0023322.1 mouse_genomes_project 17 38092324 38096060 + MGP_CBAJ_P0046944 Ly6g5c protein_coding protein_coding MGP_CBAJ_T0010057.1 MGP_CBAJ_G0008195.1 mouse_genomes_project 17 25067919 25067982 - Mir6965 miRNA miRNA MGP_CBAJ_T0045270.1 MGP_CBAJ_G0022882.1 mouse_genomes_project 17 14792635 14813252 - MGP_CBAJ_P0045270 Rgmb protein_coding protein_coding MGP_CBAJ_T0046869.1 MGP_CBAJ_G0023305.1 mouse_genomes_project 17 37926827 37929645 - MGP_CBAJ_P0046869 Hspa1a protein_coding protein_coding MGP_CBAJ_T0011299.1 MGP_CBAJ_G0009437.1 mouse_genomes_project 17 40435106 40435182 - Gm27735 misc_RNA misc_RNA MGP_CBAJ_T0047788.1 MGP_CBAJ_G0023582.1 mouse_genomes_project 17 55790014 55804235 - MGP_CBAJ_P0047788 Dazl protein_coding protein_coding MGP_CBAJ_T0047789.1 MGP_CBAJ_G0023582.1 mouse_genomes_project 17 55791834 55803579 - MGP_CBAJ_P0047789 Dazl protein_coding unknown_likely_coding MGP_CBAJ_T0046488.1 MGP_CBAJ_G0023230.1 mouse_genomes_project 17 35957835 35959208 + MGP_CBAJ_P0046488 Actl9 protein_coding protein_coding MGP_CBAJ_T0047307.1 MGP_CBAJ_G0023418.1 mouse_genomes_project 17 41116376 41119144 + MGP_CBAJ_P0047307 protein_coding protein_coding MGP_CBAJ_T0048224.1 MGP_CBAJ_G0023737.1 mouse_genomes_project 17 88104234 88182871 - MGP_CBAJ_P0048224 Heatr5b protein_coding protein_coding MGP_CBAJ_T0045307.1 MGP_CBAJ_G0022901.1 mouse_genomes_project 17 19423658 19459130 + MGP_CBAJ_P0045307 Vmn2r101 protein_coding protein_coding MGP_CBAJ_T0047825.1 MGP_CBAJ_G0023595.1 mouse_genomes_project 17 60367321 60369917 - MGP_CBAJ_P0047825 Armcx3 protein_coding protein_coding MGP_CBAJ_T0047378.1 MGP_CBAJ_G0023474.1 mouse_genomes_project 17 47764009 47834542 + MGP_CBAJ_P0047378 Adgrf1 protein_coding protein_coding MGP_CBAJ_T0048161.1 MGP_CBAJ_G0023715.1 mouse_genomes_project 17 81397961 81430132 + MGP_CBAJ_P0048161 Lbh protein_coding protein_coding MGP_CBAJ_T0048162.1 MGP_CBAJ_G0023715.1 mouse_genomes_project 17 81403831 81424836 + MGP_CBAJ_P0048162 Lbh protein_coding nonsense_mediated_decay MGP_CBAJ_T0045312.1 MGP_CBAJ_G0022906.1 mouse_genomes_project 17 20137532 20156799 - MGP_CBAJ_P0045312 Fpr-rs6 protein_coding protein_coding MGP_CBAJ_T0013031.1 MGP_CBAJ_G0011143.1 mouse_genomes_project 17 3266773 3267257 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0047101.1 MGP_CBAJ_G0023358.1 mouse_genomes_project 17 39081458 39085839 - MGP_CBAJ_P0047101 Tubb5 protein_coding protein_coding MGP_CBAJ_T0047102.1 MGP_CBAJ_G0023358.1 mouse_genomes_project 17 39083131 39084587 - Tubb5 protein_coding retained_intron MGP_CBAJ_T0047103.1 MGP_CBAJ_G0023358.1 mouse_genomes_project 17 39083427 39085741 - MGP_CBAJ_P0047103 Tubb5 protein_coding protein_coding MGP_CBAJ_T0047104.1 MGP_CBAJ_G0023358.1 mouse_genomes_project 17 39083773 39085750 - Tubb5 protein_coding retained_intron MGP_CBAJ_T0100258.1 MGP_CBAJ_G0038513.1 mouse_genomes_project 17 65896364 65896485 - Gm23769 snoRNA snoRNA MGP_CBAJ_T0045734.1 MGP_CBAJ_G0023045.1 mouse_genomes_project 17 26216810 26219424 + MGP_CBAJ_P0045734 Tsr3 protein_coding protein_coding MGP_CBAJ_T0045422.1 MGP_CBAJ_G0022963.1 mouse_genomes_project 17 24380844 24382476 + MGP_CBAJ_P0045422 Hcfc1r1 protein_coding protein_coding MGP_CBAJ_T0045423.1 MGP_CBAJ_G0022963.1 mouse_genomes_project 17 24380856 24382476 + MGP_CBAJ_P0045423 Hcfc1r1 protein_coding protein_coding MGP_CBAJ_T0045424.1 MGP_CBAJ_G0022963.1 mouse_genomes_project 17 24380875 24382423 + MGP_CBAJ_P0045424 Hcfc1r1 protein_coding protein_coding MGP_CBAJ_T0006830.1 MGP_CBAJ_G0005619.1 mouse_genomes_project 17 31291558 31323200 - Gm26885 lincRNA lincRNA MGP_CBAJ_T0003640.1 MGP_CBAJ_G0003285.1 mouse_genomes_project 17 11202018 11345168 + antisense antisense MGP_CBAJ_T0003641.1 MGP_CBAJ_G0003285.1 mouse_genomes_project 17 11202037 11311785 + antisense antisense MGP_CBAJ_T0003642.1 MGP_CBAJ_G0003285.1 mouse_genomes_project 17 11202081 11296614 + antisense antisense MGP_CBAJ_T0003643.1 MGP_CBAJ_G0003285.1 mouse_genomes_project 17 11202092 11295775 + antisense antisense MGP_CBAJ_T0003644.1 MGP_CBAJ_G0003285.1 mouse_genomes_project 17 11202105 11311686 + antisense antisense MGP_CBAJ_T0003645.1 MGP_CBAJ_G0003285.1 mouse_genomes_project 17 11297001 11311870 + antisense antisense MGP_CBAJ_T0045397.1 MGP_CBAJ_G0022957.1 mouse_genomes_project 17 24211321 24219725 - MGP_CBAJ_P0045397 Zfp213 protein_coding protein_coding MGP_CBAJ_T0045758.1 MGP_CBAJ_G0023048.1 mouse_genomes_project 17 26280613 26282381 + MGP_CBAJ_P0045758 Prss34 protein_coding protein_coding MGP_CBAJ_T0045296.1 MGP_CBAJ_G0022891.1 mouse_genomes_project 17 17414902 17415874 + MGP_CBAJ_P0045296 Fpr-rs4 protein_coding protein_coding MGP_CBAJ_T0006804.1 MGP_CBAJ_G0005599.1 mouse_genomes_project 17 16700012 16708171 - Gm26873 lincRNA lincRNA MGP_CBAJ_T0045412.1 MGP_CBAJ_G0022960.1 mouse_genomes_project 17 24313918 24341051 - MGP_CBAJ_P0045412 Mmp25 protein_coding protein_coding MGP_CBAJ_T0046183.1 MGP_CBAJ_G0023147.1 mouse_genomes_project 17 30434397 30443475 + MGP_CBAJ_P0046183 Mapk13 protein_coding protein_coding MGP_CBAJ_T0046184.1 MGP_CBAJ_G0023147.1 mouse_genomes_project 17 30434426 30442996 + Mapk13 protein_coding retained_intron MGP_CBAJ_T0046185.1 MGP_CBAJ_G0023147.1 mouse_genomes_project 17 30434439 30443323 + MGP_CBAJ_P0046185 Mapk13 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046186.1 MGP_CBAJ_G0023147.1 mouse_genomes_project 17 30434462 30442403 + Mapk13 protein_coding retained_intron MGP_CBAJ_T0047324.1 MGP_CBAJ_G0023434.1 mouse_genomes_project 17 41572012 41573029 + MGP_CBAJ_P0047324 Olfr128 protein_coding protein_coding MGP_CBAJ_T0047332.1 MGP_CBAJ_G0023440.1 mouse_genomes_project 17 41819645 41820587 - MGP_CBAJ_P0047332 Olfr132 protein_coding protein_coding MGP_CBAJ_T0003658.1 MGP_CBAJ_G0003297.1 mouse_genomes_project 17 29458293 29481164 - Gm15598 antisense antisense MGP_CBAJ_T0046363.1 MGP_CBAJ_G0023190.1 mouse_genomes_project 17 33856896 33882669 + MGP_CBAJ_P0046363 Pknox1 protein_coding protein_coding MGP_CBAJ_T0046364.1 MGP_CBAJ_G0023190.1 mouse_genomes_project 17 33858644 33884864 + MGP_CBAJ_P0046364 Pknox1 protein_coding protein_coding MGP_CBAJ_T0046365.1 MGP_CBAJ_G0023190.1 mouse_genomes_project 17 33858788 33884860 + MGP_CBAJ_P0046365 Pknox1 protein_coding protein_coding MGP_CBAJ_T0046366.1 MGP_CBAJ_G0023190.1 mouse_genomes_project 17 33866562 33866989 + Pknox1 protein_coding processed_transcript MGP_CBAJ_T0046367.1 MGP_CBAJ_G0023190.1 mouse_genomes_project 17 33869607 33874388 + Pknox1 protein_coding retained_intron MGP_CBAJ_T0046368.1 MGP_CBAJ_G0023190.1 mouse_genomes_project 17 33879925 33880772 + Pknox1 protein_coding retained_intron MGP_CBAJ_T0006883.1 MGP_CBAJ_G0005657.1 mouse_genomes_project 17 88232168 88244054 + Gm26637 lincRNA lincRNA MGP_CBAJ_T0048119.1 MGP_CBAJ_G0023703.1 mouse_genomes_project 17 79475274 79533383 + Lpin2 protein_coding retained_intron MGP_CBAJ_T0048120.1 MGP_CBAJ_G0023703.1 mouse_genomes_project 17 79476270 79530558 + MGP_CBAJ_P0048120 Lpin2 protein_coding protein_coding MGP_CBAJ_T0048121.1 MGP_CBAJ_G0023703.1 mouse_genomes_project 17 79476437 79517539 + Lpin2 protein_coding retained_intron MGP_CBAJ_T0048122.1 MGP_CBAJ_G0023703.1 mouse_genomes_project 17 79476692 79548141 + MGP_CBAJ_P0048122 Lpin2 protein_coding protein_coding MGP_CBAJ_T0048123.1 MGP_CBAJ_G0023703.1 mouse_genomes_project 17 79499688 79529758 + MGP_CBAJ_P0048123 Lpin2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048124.1 MGP_CBAJ_G0023703.1 mouse_genomes_project 17 79499710 79546566 + MGP_CBAJ_P0048124 Lpin2 protein_coding protein_coding MGP_CBAJ_T0048125.1 MGP_CBAJ_G0023703.1 mouse_genomes_project 17 79529685 79536359 + Lpin2 protein_coding retained_intron MGP_CBAJ_T0048126.1 MGP_CBAJ_G0023703.1 mouse_genomes_project 17 79536937 79537676 + Lpin2 protein_coding retained_intron MGP_CBAJ_T0048127.1 MGP_CBAJ_G0023703.1 mouse_genomes_project 17 79536947 79544757 + MGP_CBAJ_P0048127 Lpin2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048128.1 MGP_CBAJ_G0023703.1 mouse_genomes_project 17 79538907 79543132 + Lpin2 protein_coding retained_intron MGP_CBAJ_T0048129.1 MGP_CBAJ_G0023703.1 mouse_genomes_project 17 79539008 79541785 + Lpin2 protein_coding retained_intron MGP_CBAJ_T0048130.1 MGP_CBAJ_G0023703.1 mouse_genomes_project 17 79540701 79544211 + Lpin2 protein_coding retained_intron MGP_CBAJ_T0048131.1 MGP_CBAJ_G0023703.1 mouse_genomes_project 17 79544334 79545639 + Lpin2 protein_coding retained_intron MGP_CBAJ_T0047134.1 MGP_CBAJ_G0023364.1 mouse_genomes_project 17 39157276 39169771 - MGP_CBAJ_P0047134 Atat1 protein_coding protein_coding MGP_CBAJ_T0047135.1 MGP_CBAJ_G0023364.1 mouse_genomes_project 17 39157290 39169742 - MGP_CBAJ_P0047135 Atat1 protein_coding protein_coding MGP_CBAJ_T0047136.1 MGP_CBAJ_G0023364.1 mouse_genomes_project 17 39157293 39169753 - MGP_CBAJ_P0047136 Atat1 protein_coding protein_coding MGP_CBAJ_T0047137.1 MGP_CBAJ_G0023364.1 mouse_genomes_project 17 39157296 39158264 - Atat1 protein_coding retained_intron MGP_CBAJ_T0047138.1 MGP_CBAJ_G0023364.1 mouse_genomes_project 17 39157563 39168657 - MGP_CBAJ_P0047138 Atat1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047139.1 MGP_CBAJ_G0023364.1 mouse_genomes_project 17 39159492 39169741 - MGP_CBAJ_P0047139 Atat1 protein_coding protein_coding MGP_CBAJ_T0047140.1 MGP_CBAJ_G0023364.1 mouse_genomes_project 17 39159527 39169741 - MGP_CBAJ_P0047140 Atat1 protein_coding protein_coding MGP_CBAJ_T0047141.1 MGP_CBAJ_G0023364.1 mouse_genomes_project 17 39160170 39164023 - MGP_CBAJ_P0047141 Atat1 protein_coding protein_coding MGP_CBAJ_T0047142.1 MGP_CBAJ_G0023364.1 mouse_genomes_project 17 39161661 39169131 - Atat1 protein_coding retained_intron MGP_CBAJ_T0047143.1 MGP_CBAJ_G0023364.1 mouse_genomes_project 17 39161678 39169269 - Atat1 protein_coding processed_transcript MGP_CBAJ_T0047144.1 MGP_CBAJ_G0023364.1 mouse_genomes_project 17 39161682 39168735 - Atat1 protein_coding retained_intron MGP_CBAJ_T0047145.1 MGP_CBAJ_G0023364.1 mouse_genomes_project 17 39161715 39169322 - MGP_CBAJ_P0047145 Atat1 protein_coding protein_coding MGP_CBAJ_T0047146.1 MGP_CBAJ_G0023364.1 mouse_genomes_project 17 39163026 39169435 - Atat1 protein_coding retained_intron MGP_CBAJ_T0047147.1 MGP_CBAJ_G0023364.1 mouse_genomes_project 17 39167660 39169741 - Atat1 protein_coding processed_transcript MGP_CBAJ_T0047148.1 MGP_CBAJ_G0023364.1 mouse_genomes_project 17 39168279 39169727 - MGP_CBAJ_P0047148 Atat1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047149.1 MGP_CBAJ_G0023364.1 mouse_genomes_project 17 39168626 39169705 - Atat1 protein_coding retained_intron MGP_CBAJ_T0006789.1 MGP_CBAJ_G0005588.1 mouse_genomes_project 17 3240454 3244626 + 3300005D01Rik lincRNA lincRNA MGP_CBAJ_T0006790.1 MGP_CBAJ_G0005588.1 mouse_genomes_project 17 3240496 3244781 + 3300005D01Rik lincRNA lincRNA MGP_CBAJ_T0006791.1 MGP_CBAJ_G0005588.1 mouse_genomes_project 17 3241288 3244973 + 3300005D01Rik lincRNA lincRNA MGP_CBAJ_T0006792.1 MGP_CBAJ_G0005588.1 mouse_genomes_project 17 3241449 3244627 + 3300005D01Rik lincRNA lincRNA MGP_CBAJ_T0010096.1 MGP_CBAJ_G0008234.1 mouse_genomes_project 17 62722448 62722512 - Mir6977 miRNA miRNA MGP_CBAJ_T0047632.1 MGP_CBAJ_G0023546.1 mouse_genomes_project 17 52476462 52500245 - MGP_CBAJ_P0047632 1700001C19Rik protein_coding protein_coding MGP_CBAJ_T0047633.1 MGP_CBAJ_G0023546.1 mouse_genomes_project 17 52477103 52485273 - MGP_CBAJ_P0047633 1700001C19Rik protein_coding protein_coding MGP_CBAJ_T0047634.1 MGP_CBAJ_G0023546.1 mouse_genomes_project 17 52477111 52478440 - 1700001C19Rik protein_coding processed_transcript MGP_CBAJ_T0047635.1 MGP_CBAJ_G0023546.1 mouse_genomes_project 17 52477356 52500246 - 1700001C19Rik protein_coding processed_transcript MGP_CBAJ_T0000958.1 MGP_CBAJ_G0000890.1 mouse_genomes_project 17 57522875 57526795 + TEC TEC MGP_CBAJ_T0047934.1 MGP_CBAJ_G0023639.1 mouse_genomes_project 17 63145473 63206566 - MGP_CBAJ_P0047934 Rfx2 protein_coding protein_coding MGP_CBAJ_T0047935.1 MGP_CBAJ_G0023639.1 mouse_genomes_project 17 63145473 63206566 - MGP_CBAJ_P0047935 Rfx2 protein_coding protein_coding MGP_CBAJ_T0006835.1 MGP_CBAJ_G0005623.1 mouse_genomes_project 17 34770977 34773017 + lincRNA lincRNA MGP_CBAJ_T0046900.1 MGP_CBAJ_G0023312.1 mouse_genomes_project 17 38010528 38012073 - Sapcd1 protein_coding retained_intron MGP_CBAJ_T0046901.1 MGP_CBAJ_G0023312.1 mouse_genomes_project 17 38010528 38012328 - MGP_CBAJ_P0046901 Sapcd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046902.1 MGP_CBAJ_G0023312.1 mouse_genomes_project 17 38010544 38012430 - MGP_CBAJ_P0046902 Sapcd1 protein_coding protein_coding MGP_CBAJ_T0046903.1 MGP_CBAJ_G0023312.1 mouse_genomes_project 17 38010832 38012430 - MGP_CBAJ_P0046903 Sapcd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047365.1 MGP_CBAJ_G0023465.1 mouse_genomes_project 17 45115339 45133261 - MGP_CBAJ_P0047365 Glyatl3 protein_coding protein_coding MGP_CBAJ_T0047329.1 MGP_CBAJ_G0023438.1 mouse_genomes_project 17 41749840 41750745 + MGP_CBAJ_P0047329 protein_coding protein_coding MGP_CBAJ_T0017305.1 MGP_CBAJ_G0015087.1 mouse_genomes_project 17 36192763 36207686 + Gm20507 processed_transcript processed_transcript MGP_CBAJ_T0006885.1 MGP_CBAJ_G0005659.1 mouse_genomes_project 17 92887727 92889452 + Gm29052 lincRNA lincRNA MGP_CBAJ_T0101755.1 MGP_CBAJ_G0039786.1 mouse_genomes_project 17 40993484 40994411 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099004.1 MGP_CBAJ_G0037259.1 mouse_genomes_project 17 61832437 61832542 + Gm22654 snRNA snRNA MGP_CBAJ_T0046736.1 MGP_CBAJ_G0023281.1 mouse_genomes_project 17 37514877 37516826 + MGP_CBAJ_P0046736 Gpsm3 protein_coding protein_coding MGP_CBAJ_T0046737.1 MGP_CBAJ_G0023281.1 mouse_genomes_project 17 37515163 37516826 + MGP_CBAJ_P0046737 Gpsm3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046739.1 MGP_CBAJ_G0023281.1 mouse_genomes_project 17 37515302 37516712 + MGP_CBAJ_P0046739 Gpsm3 protein_coding protein_coding MGP_CBAJ_T0045133.1 MGP_CBAJ_G0022844.1 mouse_genomes_project 17 8626858 9113345 - MGP_CBAJ_P0045133 Pacrg protein_coding protein_coding MGP_CBAJ_T0045134.1 MGP_CBAJ_G0022844.1 mouse_genomes_project 17 8820633 8875010 - Pacrg protein_coding processed_transcript MGP_CBAJ_T0045291.1 MGP_CBAJ_G0022888.1 mouse_genomes_project 17 17240708 17248384 - MGP_CBAJ_P0045291 Fpr1 protein_coding protein_coding MGP_CBAJ_T0003708.1 MGP_CBAJ_G0003332.1 mouse_genomes_project 17 72223518 72228765 - Gm17133 antisense antisense MGP_CBAJ_T0048225.1 MGP_CBAJ_G0023738.1 mouse_genomes_project 17 88183005 88195707 + MGP_CBAJ_P0048225 Gpatch11 protein_coding protein_coding MGP_CBAJ_T0048297.1 MGP_CBAJ_G0023771.1 mouse_genomes_project 17 93211394 93351589 + MGP_CBAJ_P0048297 Eml4 protein_coding protein_coding MGP_CBAJ_T0048298.1 MGP_CBAJ_G0023771.1 mouse_genomes_project 17 93211394 93351589 + MGP_CBAJ_P0048298 Eml4 protein_coding protein_coding MGP_CBAJ_T0048299.1 MGP_CBAJ_G0023771.1 mouse_genomes_project 17 93211394 93351589 + MGP_CBAJ_P0048299 Eml4 protein_coding protein_coding MGP_CBAJ_T0003665.1 MGP_CBAJ_G0003302.1 mouse_genomes_project 17 33385084 33394721 + Gm15318 antisense antisense MGP_CBAJ_T0003666.1 MGP_CBAJ_G0003302.1 mouse_genomes_project 17 33385084 33395450 + Gm15318 antisense antisense MGP_CBAJ_T0003667.1 MGP_CBAJ_G0003302.1 mouse_genomes_project 17 33385084 33393886 + Gm15318 antisense antisense MGP_CBAJ_T0101758.1 MGP_CBAJ_G0039789.1 mouse_genomes_project 17 41040408 41040965 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047971.1 MGP_CBAJ_G0023659.1 mouse_genomes_project 17 63695826 63708780 - MGP_CBAJ_P0047971 Gpr108 protein_coding protein_coding MGP_CBAJ_T0048280.1 MGP_CBAJ_G0023762.1 mouse_genomes_project 17 90107223 90155808 - MGP_CBAJ_P0048280 Cdkl4 protein_coding protein_coding MGP_CBAJ_T0045218.1 MGP_CBAJ_G0022869.1 mouse_genomes_project 17 13632963 13757866 - MGP_CBAJ_P0045218 Wdr27 protein_coding protein_coding MGP_CBAJ_T0047333.1 MGP_CBAJ_G0023441.1 mouse_genomes_project 17 41837966 41841448 + MGP_CBAJ_P0047333 Olfr133 protein_coding protein_coding MGP_CBAJ_T0047334.1 MGP_CBAJ_G0023441.1 mouse_genomes_project 17 41841074 41842164 + MGP_CBAJ_P0047334 Olfr133 protein_coding protein_coding MGP_CBAJ_T0048105.1 MGP_CBAJ_G0023699.1 mouse_genomes_project 17 79189184 79189676 + MGP_CBAJ_P0048105 Gm16519 protein_coding protein_coding MGP_CBAJ_T0046924.1 MGP_CBAJ_G0023317.1 mouse_genomes_project 17 38049343 38053573 + MGP_CBAJ_P0046924 Ly6g6c protein_coding protein_coding MGP_CBAJ_T0046925.1 MGP_CBAJ_G0023317.1 mouse_genomes_project 17 38051269 38053990 + MGP_CBAJ_P0046925 Ly6g6c protein_coding protein_coding MGP_CBAJ_T0046926.1 MGP_CBAJ_G0023317.1 mouse_genomes_project 17 38051334 38053482 + MGP_CBAJ_P0046926 Ly6g6c protein_coding protein_coding MGP_CBAJ_T0013083.1 MGP_CBAJ_G0011195.1 mouse_genomes_project 17 41504400 41505337 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0046999.1 MGP_CBAJ_G0023336.1 mouse_genomes_project 17 38230431 38233757 + MGP_CBAJ_P0046999 Gm16181 protein_coding protein_coding MGP_CBAJ_T0045150.1 MGP_CBAJ_G0022847.1 mouse_genomes_project 17 10621417 10713706 - MGP_CBAJ_P0045150 Map3k4 protein_coding protein_coding MGP_CBAJ_T0047723.1 MGP_CBAJ_G0023565.1 mouse_genomes_project 17 53449014 53462606 + MGP_CBAJ_P0047723 Trem1 protein_coding protein_coding MGP_CBAJ_T0047724.1 MGP_CBAJ_G0023565.1 mouse_genomes_project 17 53449017 53463168 + MGP_CBAJ_P0047724 Trem1 protein_coding protein_coding MGP_CBAJ_T0046118.1 MGP_CBAJ_G0023135.1 mouse_genomes_project 17 29842126 29859492 + MGP_CBAJ_P0046118 Fance protein_coding protein_coding MGP_CBAJ_T0046119.1 MGP_CBAJ_G0023135.1 mouse_genomes_project 17 29842143 29859492 + Fance protein_coding retained_intron MGP_CBAJ_T0046120.1 MGP_CBAJ_G0023135.1 mouse_genomes_project 17 29842162 29859491 + MGP_CBAJ_P0046120 Fance protein_coding protein_coding MGP_CBAJ_T0046121.1 MGP_CBAJ_G0023135.1 mouse_genomes_project 17 29842168 29859493 + MGP_CBAJ_P0046121 Fance protein_coding protein_coding MGP_CBAJ_T0046122.1 MGP_CBAJ_G0023135.1 mouse_genomes_project 17 29842240 29859178 + MGP_CBAJ_P0046122 Fance protein_coding protein_coding MGP_CBAJ_T0046123.1 MGP_CBAJ_G0023135.1 mouse_genomes_project 17 29844702 29853762 + MGP_CBAJ_P0046123 Fance protein_coding protein_coding MGP_CBAJ_T0046124.1 MGP_CBAJ_G0023135.1 mouse_genomes_project 17 29844739 29845725 + Fance protein_coding retained_intron MGP_CBAJ_T0046125.1 MGP_CBAJ_G0023135.1 mouse_genomes_project 17 29845635 29846855 + Fance protein_coding retained_intron MGP_CBAJ_T0046126.1 MGP_CBAJ_G0023135.1 mouse_genomes_project 17 29846091 29847513 + Fance protein_coding processed_transcript MGP_CBAJ_T0046127.1 MGP_CBAJ_G0023135.1 mouse_genomes_project 17 29846146 29859209 + MGP_CBAJ_P0046127 Fance protein_coding protein_coding MGP_CBAJ_T0046128.1 MGP_CBAJ_G0023135.1 mouse_genomes_project 17 29846445 29853746 + Fance protein_coding retained_intron MGP_CBAJ_T0046129.1 MGP_CBAJ_G0023135.1 mouse_genomes_project 17 29846702 29859374 + MGP_CBAJ_P0046129 Fance protein_coding protein_coding MGP_CBAJ_T0046130.1 MGP_CBAJ_G0023135.1 mouse_genomes_project 17 29846931 29859424 + MGP_CBAJ_P0046130 Fance protein_coding protein_coding MGP_CBAJ_T0046131.1 MGP_CBAJ_G0023135.1 mouse_genomes_project 17 29847040 29859492 + Fance protein_coding processed_transcript MGP_CBAJ_T0097981.1 MGP_CBAJ_G0036254.1 mouse_genomes_project 17 33275086 33275214 + Gm25447 rRNA rRNA MGP_CBAJ_T0011297.1 MGP_CBAJ_G0009435.1 mouse_genomes_project 17 35476897 35477172 - Gm25667 misc_RNA misc_RNA MGP_CBAJ_T0048412.1 MGP_CBAJ_G0023811.1 mouse_genomes_project 17 99398123 99457706 + MGP_CBAJ_P0048412 Gtf2a1l protein_coding protein_coding MGP_CBAJ_T0048413.1 MGP_CBAJ_G0023811.1 mouse_genomes_project 17 99398159 99432885 + MGP_CBAJ_P0048413 Gtf2a1l protein_coding protein_coding MGP_CBAJ_T0100267.1 MGP_CBAJ_G0038522.1 mouse_genomes_project 17 91984129 91984258 - Gm22386 snoRNA snoRNA MGP_CBAJ_T0101737.1 MGP_CBAJ_G0039768.1 mouse_genomes_project 17 39984936 39985162 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047867.1 MGP_CBAJ_G0023616.1 mouse_genomes_project 17 62351905 62369234 - MGP_CBAJ_P0047867 Sema6b protein_coding protein_coding MGP_CBAJ_T0047868.1 MGP_CBAJ_G0023616.1 mouse_genomes_project 17 62351905 62362743 - MGP_CBAJ_P0047868 Sema6b protein_coding protein_coding MGP_CBAJ_T0047862.1 MGP_CBAJ_G0023613.1 mouse_genomes_project 17 62324885 62338624 - MGP_CBAJ_P0047862 Plin4 protein_coding protein_coding MGP_CBAJ_T0048055.1 MGP_CBAJ_G0023687.1 mouse_genomes_project 17 74143790 74168943 - MGP_CBAJ_P0048055 Rab12 protein_coding protein_coding MGP_CBAJ_T0048056.1 MGP_CBAJ_G0023687.1 mouse_genomes_project 17 74146769 74149599 - Rab12 protein_coding retained_intron MGP_CBAJ_T0048057.1 MGP_CBAJ_G0023687.1 mouse_genomes_project 17 74149628 74168606 - Rab12 protein_coding processed_transcript MGP_CBAJ_T0048058.1 MGP_CBAJ_G0023687.1 mouse_genomes_project 17 74155019 74168939 - Rab12 protein_coding retained_intron MGP_CBAJ_T0046600.1 MGP_CBAJ_G0023249.1 mouse_genomes_project 17 36576059 36584996 + MGP_CBAJ_P0046600 Wdr46 protein_coding protein_coding MGP_CBAJ_T0046601.1 MGP_CBAJ_G0023249.1 mouse_genomes_project 17 36576116 36576860 + Wdr46 protein_coding retained_intron MGP_CBAJ_T0046602.1 MGP_CBAJ_G0023249.1 mouse_genomes_project 17 36576804 36579096 + Wdr46 protein_coding retained_intron MGP_CBAJ_T0047998.1 MGP_CBAJ_G0023671.1 mouse_genomes_project 17 71225630 71541681 + MGP_CBAJ_P0047998 protein_coding unknown_likely_coding MGP_CBAJ_T0047999.1 MGP_CBAJ_G0023671.1 mouse_genomes_project 17 71307278 71542158 + MGP_CBAJ_P0047999 protein_coding protein_coding MGP_CBAJ_T0011298.1 MGP_CBAJ_G0009436.1 mouse_genomes_project 17 39624897 39625217 - Gm22453 misc_RNA misc_RNA MGP_CBAJ_T0006875.1 MGP_CBAJ_G0005651.1 mouse_genomes_project 17 77440088 77469117 - A930029G22Rik lincRNA lincRNA MGP_CBAJ_T0047876.1 MGP_CBAJ_G0023622.1 mouse_genomes_project 17 62574732 62581100 - MGP_CBAJ_P0047876 Arrdc5 protein_coding protein_coding MGP_CBAJ_T0047355.1 MGP_CBAJ_G0023459.1 mouse_genomes_project 17 44706534 44724537 + MGP_CBAJ_P0047355 Gm44501 protein_coding protein_coding MGP_CBAJ_T0045414.1 MGP_CBAJ_G0022962.1 mouse_genomes_project 17 24375997 24377027 - Thoc6 protein_coding retained_intron MGP_CBAJ_T0045415.1 MGP_CBAJ_G0022962.1 mouse_genomes_project 17 24376001 24381091 - Thoc6 protein_coding retained_intron MGP_CBAJ_T0045416.1 MGP_CBAJ_G0022962.1 mouse_genomes_project 17 24376001 24381131 - MGP_CBAJ_P0045416 Thoc6 protein_coding protein_coding MGP_CBAJ_T0045417.1 MGP_CBAJ_G0022962.1 mouse_genomes_project 17 24376001 24381091 - MGP_CBAJ_P0045417 Thoc6 protein_coding protein_coding MGP_CBAJ_T0045418.1 MGP_CBAJ_G0022962.1 mouse_genomes_project 17 24376180 24380854 - MGP_CBAJ_P0045418 Thoc6 protein_coding protein_coding MGP_CBAJ_T0045419.1 MGP_CBAJ_G0022962.1 mouse_genomes_project 17 24376180 24381078 - MGP_CBAJ_P0045419 Thoc6 protein_coding protein_coding MGP_CBAJ_T0045420.1 MGP_CBAJ_G0022962.1 mouse_genomes_project 17 24376583 24377893 - MGP_CBAJ_P0045420 Thoc6 protein_coding protein_coding MGP_CBAJ_T0045421.1 MGP_CBAJ_G0022962.1 mouse_genomes_project 17 24377705 24381120 - MGP_CBAJ_P0045421 Thoc6 protein_coding protein_coding MGP_CBAJ_T0047320.1 MGP_CBAJ_G0023430.1 mouse_genomes_project 17 41448205 41449146 + MGP_CBAJ_P0047320 Olfr123 protein_coding protein_coding MGP_CBAJ_T0046871.1 MGP_CBAJ_G0023307.1 mouse_genomes_project 17 37927556 37946299 + MGP_CBAJ_P0046871 Gm20481 protein_coding protein_coding MGP_CBAJ_T0045798.1 MGP_CBAJ_G0023060.1 mouse_genomes_project 17 26768013 26779278 - MGP_CBAJ_P0045798 Chtf18 protein_coding protein_coding MGP_CBAJ_T0045799.1 MGP_CBAJ_G0023060.1 mouse_genomes_project 17 26768013 26779230 - MGP_CBAJ_P0045799 Chtf18 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045800.1 MGP_CBAJ_G0023060.1 mouse_genomes_project 17 26768117 26779225 - Chtf18 protein_coding retained_intron MGP_CBAJ_T0045801.1 MGP_CBAJ_G0023060.1 mouse_genomes_project 17 26768133 26769989 - MGP_CBAJ_P0045801 Chtf18 protein_coding protein_coding MGP_CBAJ_T0045802.1 MGP_CBAJ_G0023060.1 mouse_genomes_project 17 26768134 26769039 - MGP_CBAJ_P0045802 Chtf18 protein_coding protein_coding MGP_CBAJ_T0045803.1 MGP_CBAJ_G0023060.1 mouse_genomes_project 17 26769356 26769986 - Chtf18 protein_coding retained_intron MGP_CBAJ_T0045804.1 MGP_CBAJ_G0023060.1 mouse_genomes_project 17 26777434 26779269 - MGP_CBAJ_P0045804 Chtf18 protein_coding protein_coding MGP_CBAJ_T0045158.1 MGP_CBAJ_G0022853.1 mouse_genomes_project 17 11322777 11356047 - MGP_CBAJ_P0045158 Mas1 protein_coding protein_coding MGP_CBAJ_T0045159.1 MGP_CBAJ_G0022853.1 mouse_genomes_project 17 11322813 11336345 - MGP_CBAJ_P0045159 Mas1 protein_coding protein_coding MGP_CBAJ_T0045160.1 MGP_CBAJ_G0022853.1 mouse_genomes_project 17 11322813 11336225 - MGP_CBAJ_P0045160 Mas1 protein_coding protein_coding MGP_CBAJ_T0045161.1 MGP_CBAJ_G0022853.1 mouse_genomes_project 17 11322813 11336345 - MGP_CBAJ_P0045161 Mas1 protein_coding protein_coding MGP_CBAJ_T0045162.1 MGP_CBAJ_G0022853.1 mouse_genomes_project 17 11322813 11329973 - MGP_CBAJ_P0045162 Mas1 protein_coding protein_coding MGP_CBAJ_T0045163.1 MGP_CBAJ_G0022853.1 mouse_genomes_project 17 11323902 11333694 - MGP_CBAJ_P0045163 Mas1 protein_coding protein_coding MGP_CBAJ_T0045164.1 MGP_CBAJ_G0022853.1 mouse_genomes_project 17 11324005 11333680 - MGP_CBAJ_P0045164 Mas1 protein_coding protein_coding MGP_CBAJ_T0045165.1 MGP_CBAJ_G0022853.1 mouse_genomes_project 17 11324016 11333694 - MGP_CBAJ_P0045165 Mas1 protein_coding protein_coding MGP_CBAJ_T0045166.1 MGP_CBAJ_G0022853.1 mouse_genomes_project 17 11324159 11340005 - MGP_CBAJ_P0045166 Mas1 protein_coding protein_coding MGP_CBAJ_T0046904.1 MGP_CBAJ_G0023313.1 mouse_genomes_project 17 38013012 38030660 - MGP_CBAJ_P0046904 Msh5 protein_coding unknown_likely_coding MGP_CBAJ_T0046905.1 MGP_CBAJ_G0023313.1 mouse_genomes_project 17 38013018 38014312 - Msh5 protein_coding processed_transcript MGP_CBAJ_T0046906.1 MGP_CBAJ_G0023313.1 mouse_genomes_project 17 38013018 38030566 - MGP_CBAJ_P0046906 Msh5 protein_coding protein_coding MGP_CBAJ_T0046907.1 MGP_CBAJ_G0023313.1 mouse_genomes_project 17 38013018 38030652 - MGP_CBAJ_P0046907 Msh5 protein_coding protein_coding MGP_CBAJ_T0046908.1 MGP_CBAJ_G0023313.1 mouse_genomes_project 17 38013022 38017716 - MGP_CBAJ_P0046908 Msh5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046909.1 MGP_CBAJ_G0023313.1 mouse_genomes_project 17 38013093 38030486 - MGP_CBAJ_P0046909 Msh5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046910.1 MGP_CBAJ_G0023313.1 mouse_genomes_project 17 38013093 38030486 - MGP_CBAJ_P0046910 Msh5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046911.1 MGP_CBAJ_G0023313.1 mouse_genomes_project 17 38021082 38030671 - MGP_CBAJ_P0046911 Msh5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046912.1 MGP_CBAJ_G0023313.1 mouse_genomes_project 17 38023147 38027711 - Msh5 protein_coding retained_intron MGP_CBAJ_T0046913.1 MGP_CBAJ_G0023313.1 mouse_genomes_project 17 38023147 38030469 - Msh5 protein_coding retained_intron MGP_CBAJ_T0046914.1 MGP_CBAJ_G0023313.1 mouse_genomes_project 17 38027909 38030060 - Msh5 protein_coding retained_intron MGP_CBAJ_T0046915.1 MGP_CBAJ_G0023313.1 mouse_genomes_project 17 38027918 38028955 - Msh5 protein_coding retained_intron MGP_CBAJ_T0046916.1 MGP_CBAJ_G0023313.1 mouse_genomes_project 17 38028043 38030464 - MGP_CBAJ_P0046916 Msh5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046110.1 MGP_CBAJ_G0023133.1 mouse_genomes_project 17 29706219 29740006 + MGP_CBAJ_P0046110 Def6 protein_coding protein_coding MGP_CBAJ_T0046111.1 MGP_CBAJ_G0023133.1 mouse_genomes_project 17 29706278 29710786 + Def6 protein_coding processed_transcript MGP_CBAJ_T0045908.1 MGP_CBAJ_G0023084.1 mouse_genomes_project 17 27045504 27062741 + MGP_CBAJ_P0045908 D630044L22Rik protein_coding protein_coding MGP_CBAJ_T0048353.1 MGP_CBAJ_G0023796.1 mouse_genomes_project 17 97407360 97433885 - MGP_CBAJ_P0048353 Pigf protein_coding protein_coding MGP_CBAJ_T0045082.1 MGP_CBAJ_G0022830.1 mouse_genomes_project 17 6036845 6081849 - MGP_CBAJ_P0045082 protein_coding protein_coding MGP_CBAJ_T0045083.1 MGP_CBAJ_G0022830.1 mouse_genomes_project 17 6057378 6081896 - MGP_CBAJ_P0045083 protein_coding protein_coding MGP_CBAJ_T0048395.1 MGP_CBAJ_G0023808.1 mouse_genomes_project 17 99159159 99206847 + MGP_CBAJ_P0048395 Foxn2 protein_coding protein_coding MGP_CBAJ_T0048396.1 MGP_CBAJ_G0023808.1 mouse_genomes_project 17 99159232 99179840 + MGP_CBAJ_P0048396 Foxn2 protein_coding protein_coding MGP_CBAJ_T0048397.1 MGP_CBAJ_G0023808.1 mouse_genomes_project 17 99159255 99194729 + Foxn2 protein_coding retained_intron MGP_CBAJ_T0048398.1 MGP_CBAJ_G0023808.1 mouse_genomes_project 17 99159272 99203937 + MGP_CBAJ_P0048398 Foxn2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0003702.1 MGP_CBAJ_G0003328.1 mouse_genomes_project 17 55358785 55360029 - Gm16554 antisense antisense MGP_CBAJ_T0100264.1 MGP_CBAJ_G0038519.1 mouse_genomes_project 17 80013167 80013243 + Gm22858 snoRNA snoRNA MGP_CBAJ_T0045559.1 MGP_CBAJ_G0023005.1 mouse_genomes_project 17 25361141 25381319 + MGP_CBAJ_P0045559 Caskin1 protein_coding protein_coding MGP_CBAJ_T0047036.1 MGP_CBAJ_G0023346.1 mouse_genomes_project 17 38694392 38708553 + MGP_CBAJ_P0047036 Cchcr1 protein_coding protein_coding MGP_CBAJ_T0047037.1 MGP_CBAJ_G0023346.1 mouse_genomes_project 17 38694408 38697780 + Cchcr1 protein_coding retained_intron MGP_CBAJ_T0047038.1 MGP_CBAJ_G0023346.1 mouse_genomes_project 17 38694468 38708572 + MGP_CBAJ_P0047038 Cchcr1 protein_coding protein_coding MGP_CBAJ_T0047039.1 MGP_CBAJ_G0023346.1 mouse_genomes_project 17 38694755 38708562 + MGP_CBAJ_P0047039 Cchcr1 protein_coding protein_coding MGP_CBAJ_T0047040.1 MGP_CBAJ_G0023346.1 mouse_genomes_project 17 38697176 38698416 + Cchcr1 protein_coding processed_transcript MGP_CBAJ_T0047041.1 MGP_CBAJ_G0023346.1 mouse_genomes_project 17 38702241 38702994 + Cchcr1 protein_coding retained_intron MGP_CBAJ_T0047042.1 MGP_CBAJ_G0023346.1 mouse_genomes_project 17 38706453 38706990 + Cchcr1 protein_coding retained_intron MGP_CBAJ_T0047398.1 MGP_CBAJ_G0023482.1 mouse_genomes_project 17 48350939 48608505 + MGP_CBAJ_P0047398 Rcan2 protein_coding protein_coding MGP_CBAJ_T0047399.1 MGP_CBAJ_G0023482.1 mouse_genomes_project 17 48512945 48606390 + MGP_CBAJ_P0047399 Rcan2 protein_coding protein_coding MGP_CBAJ_T0047400.1 MGP_CBAJ_G0023482.1 mouse_genomes_project 17 48515187 48608505 + MGP_CBAJ_P0047400 Rcan2 protein_coding protein_coding MGP_CBAJ_T0046050.1 MGP_CBAJ_G0023121.1 mouse_genomes_project 17 28969410 29024879 - MGP_CBAJ_P0046050 Nudt3 protein_coding protein_coding MGP_CBAJ_T0046051.1 MGP_CBAJ_G0023121.1 mouse_genomes_project 17 28970604 29024378 - MGP_CBAJ_P0046051 Nudt3 protein_coding protein_coding MGP_CBAJ_T0046052.1 MGP_CBAJ_G0023121.1 mouse_genomes_project 17 28970735 28977263 - Nudt3 protein_coding retained_intron MGP_CBAJ_T0046053.1 MGP_CBAJ_G0023121.1 mouse_genomes_project 17 28970818 29024677 - MGP_CBAJ_P0046053 Nudt3 protein_coding protein_coding MGP_CBAJ_T0046054.1 MGP_CBAJ_G0023121.1 mouse_genomes_project 17 28970863 29023803 - Nudt3 protein_coding processed_transcript MGP_CBAJ_T0046055.1 MGP_CBAJ_G0023121.1 mouse_genomes_project 17 28970982 29008228 - Nudt3 protein_coding processed_transcript MGP_CBAJ_T0046056.1 MGP_CBAJ_G0023121.1 mouse_genomes_project 17 28975904 29024677 - MGP_CBAJ_P0046056 Nudt3 protein_coding protein_coding MGP_CBAJ_T0046057.1 MGP_CBAJ_G0023121.1 mouse_genomes_project 17 28975977 29024254 - MGP_CBAJ_P0046057 Nudt3 protein_coding protein_coding MGP_CBAJ_T0046058.1 MGP_CBAJ_G0023121.1 mouse_genomes_project 17 28990504 29024677 - Nudt3 protein_coding retained_intron MGP_CBAJ_T0047375.1 MGP_CBAJ_G0023471.1 mouse_genomes_project 17 47116976 47156412 - MGP_CBAJ_P0047375 Adgrf2 protein_coding protein_coding MGP_CBAJ_T0045454.1 MGP_CBAJ_G0022975.1 mouse_genomes_project 17 24569535 24571919 - MGP_CBAJ_P0045454 Prss33 protein_coding protein_coding MGP_CBAJ_T0045455.1 MGP_CBAJ_G0022975.1 mouse_genomes_project 17 24569915 24571915 - MGP_CBAJ_P0045455 Prss33 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045456.1 MGP_CBAJ_G0022975.1 mouse_genomes_project 17 24570843 24572232 - Prss33 protein_coding retained_intron MGP_CBAJ_T0047661.1 MGP_CBAJ_G0023551.1 mouse_genomes_project 17 52701610 52716305 + MGP_CBAJ_P0047661 Med20 protein_coding protein_coding MGP_CBAJ_T0047662.1 MGP_CBAJ_G0023551.1 mouse_genomes_project 17 52701613 52709602 + Med20 protein_coding retained_intron MGP_CBAJ_T0047665.1 MGP_CBAJ_G0023551.1 mouse_genomes_project 17 52701636 52716135 + Med20 protein_coding retained_intron MGP_CBAJ_T0047667.1 MGP_CBAJ_G0023551.1 mouse_genomes_project 17 52701649 52703324 + Med20 protein_coding retained_intron MGP_CBAJ_T0047310.1 MGP_CBAJ_G0023421.1 mouse_genomes_project 17 41204998 41205998 - MGP_CBAJ_P0047310 Olfr114 protein_coding protein_coding MGP_CBAJ_T0013084.1 MGP_CBAJ_G0011196.1 mouse_genomes_project 17 41523773 41524431 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0047836.1 MGP_CBAJ_G0023603.1 mouse_genomes_project 17 62150893 62155292 + MGP_CBAJ_P0047836 Ebi3 protein_coding protein_coding MGP_CBAJ_T0046696.1 MGP_CBAJ_G0023270.1 mouse_genomes_project 17 36981991 36991638 + MGP_CBAJ_P0046696 H2-Ob protein_coding protein_coding MGP_CBAJ_T0046697.1 MGP_CBAJ_G0023270.1 mouse_genomes_project 17 36981993 36984524 + H2-Ob protein_coding retained_intron MGP_CBAJ_T0046698.1 MGP_CBAJ_G0023270.1 mouse_genomes_project 17 36982019 36991529 + MGP_CBAJ_P0046698 H2-Ob protein_coding protein_coding MGP_CBAJ_T0046699.1 MGP_CBAJ_G0023270.1 mouse_genomes_project 17 36983043 36990121 + MGP_CBAJ_P0046699 H2-Ob protein_coding protein_coding MGP_CBAJ_T0101729.1 MGP_CBAJ_G0039760.1 mouse_genomes_project 17 39571177 39578386 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013088.1 MGP_CBAJ_G0011200.1 mouse_genomes_project 17 41633331 41633981 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100262.1 MGP_CBAJ_G0038517.1 mouse_genomes_project 17 80002886 80002971 + Snord92 snoRNA snoRNA MGP_CBAJ_T0010059.1 MGP_CBAJ_G0008197.1 mouse_genomes_project 17 26222176 26222264 - Mir3547 miRNA miRNA MGP_CBAJ_T0046331.1 MGP_CBAJ_G0023185.1 mouse_genomes_project 17 33485992 33517946 - MGP_CBAJ_P0046331 Rsph1 protein_coding protein_coding MGP_CBAJ_T0006847.1 MGP_CBAJ_G0005635.1 mouse_genomes_project 17 39487355 39506339 + lincRNA lincRNA MGP_CBAJ_T0006848.1 MGP_CBAJ_G0005635.1 mouse_genomes_project 17 39487355 39506340 + lincRNA lincRNA MGP_CBAJ_T0006849.1 MGP_CBAJ_G0005635.1 mouse_genomes_project 17 39496713 39507141 + lincRNA lincRNA MGP_CBAJ_T0099008.1 MGP_CBAJ_G0037263.1 mouse_genomes_project 17 73669705 73669812 + Gm23264 snRNA snRNA MGP_CBAJ_T0045711.1 MGP_CBAJ_G0023038.1 mouse_genomes_project 17 26081254 26085763 + MGP_CBAJ_P0045711 Ptx4 protein_coding protein_coding MGP_CBAJ_T0003652.1 MGP_CBAJ_G0003291.1 mouse_genomes_project 17 25637382 25637816 - Snhg9 antisense antisense MGP_CBAJ_T0048180.1 MGP_CBAJ_G0023726.1 mouse_genomes_project 17 83183625 83223890 - MGP_CBAJ_P0048180 Nlrc4 protein_coding protein_coding MGP_CBAJ_T0013077.1 MGP_CBAJ_G0011189.1 mouse_genomes_project 17 39896270 39896833 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0045807.1 MGP_CBAJ_G0023063.1 mouse_genomes_project 17 26803691 26809405 - MGP_CBAJ_P0045807 Msln protein_coding protein_coding MGP_CBAJ_T0047965.1 MGP_CBAJ_G0023656.1 mouse_genomes_project 17 63595617 63599398 - MGP_CBAJ_P0047965 Cd70 protein_coding protein_coding MGP_CBAJ_T0045640.1 MGP_CBAJ_G0023027.1 mouse_genomes_project 17 25808392 25811631 + MGP_CBAJ_P0045640 Igfals protein_coding protein_coding MGP_CBAJ_T0048340.1 MGP_CBAJ_G0023789.1 mouse_genomes_project 17 96240461 96417924 - MGP_CBAJ_P0048340 Srbd1 protein_coding protein_coding MGP_CBAJ_T0013131.1 MGP_CBAJ_G0011243.1 mouse_genomes_project 17 103660977 103662177 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0047497.1 MGP_CBAJ_G0023504.1 mouse_genomes_project 17 50959112 50974575 - MGP_CBAJ_P0047497 Rsph9 protein_coding protein_coding MGP_CBAJ_T0047501.1 MGP_CBAJ_G0023504.1 mouse_genomes_project 17 50966348 50981774 - MGP_CBAJ_P0047501 Rsph9 protein_coding protein_coding MGP_CBAJ_T0047502.1 MGP_CBAJ_G0023504.1 mouse_genomes_project 17 50972248 50974540 - Rsph9 protein_coding retained_intron MGP_CBAJ_T0046432.1 MGP_CBAJ_G0023204.1 mouse_genomes_project 17 34805638 34813470 - MGP_CBAJ_P0046432 Pglyrp2 protein_coding protein_coding MGP_CBAJ_T0046433.1 MGP_CBAJ_G0023204.1 mouse_genomes_project 17 34805899 34821493 - MGP_CBAJ_P0046433 Pglyrp2 protein_coding protein_coding MGP_CBAJ_T0010087.1 MGP_CBAJ_G0008225.1 mouse_genomes_project 17 38260143 38260260 + Mir8094 miRNA miRNA MGP_CBAJ_T0100257.1 MGP_CBAJ_G0038512.1 mouse_genomes_project 17 60717758 60717895 + Gm26291 snoRNA snoRNA MGP_CBAJ_T0045509.1 MGP_CBAJ_G0022993.1 mouse_genomes_project 17 25000897 25033438 - MGP_CBAJ_P0045509 Tbc1d24 protein_coding protein_coding MGP_CBAJ_T0045510.1 MGP_CBAJ_G0022993.1 mouse_genomes_project 17 25000898 25033465 - MGP_CBAJ_P0045510 Tbc1d24 protein_coding protein_coding MGP_CBAJ_T0045511.1 MGP_CBAJ_G0022993.1 mouse_genomes_project 17 25002604 25033418 - MGP_CBAJ_P0045511 Tbc1d24 protein_coding protein_coding MGP_CBAJ_T0045512.1 MGP_CBAJ_G0022993.1 mouse_genomes_project 17 25004238 25033422 - MGP_CBAJ_P0045512 Tbc1d24 protein_coding protein_coding MGP_CBAJ_T0045513.1 MGP_CBAJ_G0022993.1 mouse_genomes_project 17 25004411 25033417 - MGP_CBAJ_P0045513 Tbc1d24 protein_coding protein_coding MGP_CBAJ_T0045514.1 MGP_CBAJ_G0022993.1 mouse_genomes_project 17 25004457 25033434 - MGP_CBAJ_P0045514 Tbc1d24 protein_coding protein_coding MGP_CBAJ_T0045515.1 MGP_CBAJ_G0022993.1 mouse_genomes_project 17 25004468 25027852 - MGP_CBAJ_P0045515 Tbc1d24 protein_coding protein_coding MGP_CBAJ_T0045516.1 MGP_CBAJ_G0022993.1 mouse_genomes_project 17 25004518 25033399 - MGP_CBAJ_P0045516 Tbc1d24 protein_coding protein_coding MGP_CBAJ_T0045517.1 MGP_CBAJ_G0022993.1 mouse_genomes_project 17 25004518 25033426 - MGP_CBAJ_P0045517 Tbc1d24 protein_coding protein_coding MGP_CBAJ_T0045518.1 MGP_CBAJ_G0022993.1 mouse_genomes_project 17 25004537 25033417 - MGP_CBAJ_P0045518 Tbc1d24 protein_coding protein_coding MGP_CBAJ_T0045519.1 MGP_CBAJ_G0022993.1 mouse_genomes_project 17 25004538 25027852 - MGP_CBAJ_P0045519 Tbc1d24 protein_coding protein_coding MGP_CBAJ_T0045520.1 MGP_CBAJ_G0022993.1 mouse_genomes_project 17 25004684 25033428 - MGP_CBAJ_P0045520 Tbc1d24 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045521.1 MGP_CBAJ_G0022993.1 mouse_genomes_project 17 25005888 25006712 - Tbc1d24 protein_coding processed_transcript MGP_CBAJ_T0045522.1 MGP_CBAJ_G0022993.1 mouse_genomes_project 17 25007086 25033385 - MGP_CBAJ_P0045522 Tbc1d24 protein_coding protein_coding MGP_CBAJ_T0045523.1 MGP_CBAJ_G0022993.1 mouse_genomes_project 17 25017514 25033422 - Tbc1d24 protein_coding processed_transcript MGP_CBAJ_T0045524.1 MGP_CBAJ_G0022993.1 mouse_genomes_project 17 25031750 25037292 - MGP_CBAJ_P0045524 Tbc1d24 protein_coding protein_coding MGP_CBAJ_T0003693.1 MGP_CBAJ_G0003321.1 mouse_genomes_project 17 49360168 49363872 + Runx2os2 antisense antisense MGP_CBAJ_T0047420.1 MGP_CBAJ_G0023487.1 mouse_genomes_project 17 49445293 49807907 + MGP_CBAJ_P0047420 Supt3 protein_coding protein_coding MGP_CBAJ_T0047421.1 MGP_CBAJ_G0023487.1 mouse_genomes_project 17 49445466 49603672 + Supt3 protein_coding processed_transcript MGP_CBAJ_T0047422.1 MGP_CBAJ_G0023487.1 mouse_genomes_project 17 49445537 49807903 + MGP_CBAJ_P0047422 Supt3 protein_coding protein_coding MGP_CBAJ_T0047423.1 MGP_CBAJ_G0023487.1 mouse_genomes_project 17 49454771 49807896 + MGP_CBAJ_P0047423 Supt3 protein_coding protein_coding MGP_CBAJ_T0013063.1 MGP_CBAJ_G0011175.1 mouse_genomes_project 17 37472552 37472959 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006794.1 MGP_CBAJ_G0005590.1 mouse_genomes_project 17 6338300 6349078 - Gm16702 lincRNA lincRNA MGP_CBAJ_T0047309.1 MGP_CBAJ_G0023420.1 mouse_genomes_project 17 41180005 41189401 - MGP_CBAJ_P0047309 Olfr113 protein_coding protein_coding MGP_CBAJ_T0100255.1 MGP_CBAJ_G0038510.1 mouse_genomes_project 17 40303429 40303556 - Gm25973 snoRNA snoRNA MGP_CBAJ_T0045719.1 MGP_CBAJ_G0023040.1 mouse_genomes_project 17 26126441 26137998 + MGP_CBAJ_P0045719 Ccdc154 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045720.1 MGP_CBAJ_G0023040.1 mouse_genomes_project 17 26126441 26137998 + MGP_CBAJ_P0045720 Ccdc154 protein_coding protein_coding MGP_CBAJ_T0045721.1 MGP_CBAJ_G0023040.1 mouse_genomes_project 17 26126444 26137996 + MGP_CBAJ_P0045721 Ccdc154 protein_coding protein_coding MGP_CBAJ_T0045722.1 MGP_CBAJ_G0023040.1 mouse_genomes_project 17 26126822 26137967 + MGP_CBAJ_P0045722 Ccdc154 protein_coding protein_coding MGP_CBAJ_T0047296.1 MGP_CBAJ_G0023409.1 mouse_genomes_project 17 40822789 40827966 - MGP_CBAJ_P0047296 Olfr98 protein_coding protein_coding MGP_CBAJ_T0010080.1 MGP_CBAJ_G0008218.1 mouse_genomes_project 17 37720314 37720381 - Gm27471 miRNA miRNA MGP_CBAJ_T0045552.1 MGP_CBAJ_G0023001.1 mouse_genomes_project 17 25304706 25316330 - MGP_CBAJ_P0045552 E4f1 protein_coding unknown_likely_coding MGP_CBAJ_T0045553.1 MGP_CBAJ_G0023001.1 mouse_genomes_project 17 25304726 25316365 - MGP_CBAJ_P0045553 E4f1 protein_coding protein_coding MGP_CBAJ_T0003705.1 MGP_CBAJ_G0003331.1 mouse_genomes_project 17 65649275 65667041 + Nudt12os antisense antisense MGP_CBAJ_T0003706.1 MGP_CBAJ_G0003331.1 mouse_genomes_project 17 65649299 65682693 + Nudt12os antisense antisense MGP_CBAJ_T0003707.1 MGP_CBAJ_G0003331.1 mouse_genomes_project 17 65672214 65682441 + Nudt12os antisense antisense MGP_CBAJ_T0046027.1 MGP_CBAJ_G0023113.1 mouse_genomes_project 17 28361932 28443971 + MGP_CBAJ_P0046027 Itpr3 protein_coding protein_coding MGP_CBAJ_T0013114.1 MGP_CBAJ_G0011226.1 mouse_genomes_project 17 75683585 75684523 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0000964.1 MGP_CBAJ_G0000896.1 mouse_genomes_project 17 93975898 93979963 - TEC TEC MGP_CBAJ_T0048149.1 MGP_CBAJ_G0023709.1 mouse_genomes_project 17 79986077 80035226 + MGP_CBAJ_P0048149 Wdr43 protein_coding protein_coding MGP_CBAJ_T0047323.1 MGP_CBAJ_G0023433.1 mouse_genomes_project 17 41483161 41498168 + MGP_CBAJ_P0047323 protein_coding protein_coding MGP_CBAJ_T0097785.1 MGP_CBAJ_G0036058.1 mouse_genomes_project 17 35957835 35959205 + pseudogene pseudogene MGP_CBAJ_T0048157.1 MGP_CBAJ_G0023712.1 mouse_genomes_project 17 80170585 80247641 + MGP_CBAJ_P0048157 Clip4 protein_coding protein_coding MGP_CBAJ_T0048158.1 MGP_CBAJ_G0023712.1 mouse_genomes_project 17 80171553 80247647 + MGP_CBAJ_P0048158 Clip4 protein_coding unknown_likely_coding MGP_CBAJ_T0010095.1 MGP_CBAJ_G0008233.1 mouse_genomes_project 17 62483134 62483245 + Mir7b miRNA miRNA MGP_CBAJ_T0048339.1 MGP_CBAJ_G0023788.1 mouse_genomes_project 17 95896136 95900393 - MGP_CBAJ_P0048339 Six2 protein_coding protein_coding MGP_CBAJ_T0010089.1 MGP_CBAJ_G0008227.1 mouse_genomes_project 17 39177588 39177669 + Mir1894 miRNA miRNA MGP_CBAJ_T0101681.1 MGP_CBAJ_G0039712.1 mouse_genomes_project 17 18384352 18384478 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0097988.1 MGP_CBAJ_G0036261.1 mouse_genomes_project 17 87852885 87852996 - Gm22562 rRNA rRNA MGP_CBAJ_T0010050.1 MGP_CBAJ_G0008188.1 mouse_genomes_project 17 17192795 17192912 - Gm25927 miRNA miRNA MGP_CBAJ_T0047007.1 MGP_CBAJ_G0023338.1 mouse_genomes_project 17 38250596 38262306 + MGP_CBAJ_P0047007 Ddx39b protein_coding protein_coding MGP_CBAJ_T0047008.1 MGP_CBAJ_G0023338.1 mouse_genomes_project 17 38250634 38258164 + MGP_CBAJ_P0047008 Ddx39b protein_coding protein_coding MGP_CBAJ_T0047009.1 MGP_CBAJ_G0023338.1 mouse_genomes_project 17 38250655 38258725 + Ddx39b protein_coding retained_intron MGP_CBAJ_T0047010.1 MGP_CBAJ_G0023338.1 mouse_genomes_project 17 38250720 38262279 + MGP_CBAJ_P0047010 Ddx39b protein_coding protein_coding MGP_CBAJ_T0047011.1 MGP_CBAJ_G0023338.1 mouse_genomes_project 17 38250846 38252075 + Ddx39b protein_coding processed_transcript MGP_CBAJ_T0047012.1 MGP_CBAJ_G0023338.1 mouse_genomes_project 17 38251518 38262275 + MGP_CBAJ_P0047012 Ddx39b protein_coding protein_coding MGP_CBAJ_T0010106.1 MGP_CBAJ_G0008244.1 mouse_genomes_project 17 102035874 102036019 + miRNA miRNA MGP_CBAJ_T0006845.1 MGP_CBAJ_G0005633.1 mouse_genomes_project 17 39014120 39022864 + 4833427F10Rik lincRNA lincRNA MGP_CBAJ_T0003696.1 MGP_CBAJ_G0003324.1 mouse_genomes_project 17 50436666 50439381 + Gm16172 antisense antisense MGP_CBAJ_T0045242.1 MGP_CBAJ_G0022877.1 mouse_genomes_project 17 14384726 14403388 - MGP_CBAJ_P0045242 Psmb1 protein_coding protein_coding MGP_CBAJ_T0047158.1 MGP_CBAJ_G0023366.1 mouse_genomes_project 17 39176133 39177464 + protein_coding retained_intron MGP_CBAJ_T0047159.1 MGP_CBAJ_G0023366.1 mouse_genomes_project 17 39176278 39177040 + protein_coding processed_transcript MGP_CBAJ_T0047160.1 MGP_CBAJ_G0023366.1 mouse_genomes_project 17 39176481 39178058 + protein_coding retained_intron MGP_CBAJ_T0047161.1 MGP_CBAJ_G0023366.1 mouse_genomes_project 17 39176682 39194654 + MGP_CBAJ_P0047161 protein_coding unknown_likely_coding MGP_CBAJ_T0047162.1 MGP_CBAJ_G0023366.1 mouse_genomes_project 17 39176697 39183995 + MGP_CBAJ_P0047162 protein_coding protein_coding MGP_CBAJ_T0047163.1 MGP_CBAJ_G0023366.1 mouse_genomes_project 17 39186195 39188522 + protein_coding retained_intron MGP_CBAJ_T0003670.1 MGP_CBAJ_G0003305.1 mouse_genomes_project 17 36539714 36540742 - BC051226 antisense antisense MGP_CBAJ_T0003671.1 MGP_CBAJ_G0003305.1 mouse_genomes_project 17 36539717 36540711 - BC051226 antisense antisense MGP_CBAJ_T0003672.1 MGP_CBAJ_G0003305.1 mouse_genomes_project 17 36539826 36540850 - BC051226 antisense antisense MGP_CBAJ_T0045061.1 MGP_CBAJ_G0022819.1 mouse_genomes_project 17 5055375 5077987 + MGP_CBAJ_P0045061 protein_coding protein_coding MGP_CBAJ_T0045069.1 MGP_CBAJ_G0022819.1 mouse_genomes_project 17 5056124 5077140 + MGP_CBAJ_P0045069 protein_coding protein_coding MGP_CBAJ_T0048354.1 MGP_CBAJ_G0023797.1 mouse_genomes_project 17 97434028 97446643 + MGP_CBAJ_P0048354 Cript protein_coding protein_coding MGP_CBAJ_T0048355.1 MGP_CBAJ_G0023797.1 mouse_genomes_project 17 97434088 97438620 + Cript protein_coding retained_intron MGP_CBAJ_T0048356.1 MGP_CBAJ_G0023797.1 mouse_genomes_project 17 97434089 97446305 + MGP_CBAJ_P0048356 Cript protein_coding protein_coding MGP_CBAJ_T0048357.1 MGP_CBAJ_G0023797.1 mouse_genomes_project 17 97434138 97446652 + MGP_CBAJ_P0048357 Cript protein_coding unknown_likely_coding MGP_CBAJ_T0003701.1 MGP_CBAJ_G0003327.1 mouse_genomes_project 17 55268358 55272545 - Gm16555 antisense antisense MGP_CBAJ_T0047386.1 MGP_CBAJ_G0023478.1 mouse_genomes_project 17 48086061 48119771 + MGP_CBAJ_P0047386 Pla2g7 protein_coding protein_coding MGP_CBAJ_T0047387.1 MGP_CBAJ_G0023478.1 mouse_genomes_project 17 48086232 48132366 + MGP_CBAJ_P0047387 Pla2g7 protein_coding protein_coding MGP_CBAJ_T0047388.1 MGP_CBAJ_G0023478.1 mouse_genomes_project 17 48086438 48114059 + MGP_CBAJ_P0047388 Pla2g7 protein_coding protein_coding MGP_CBAJ_T0047389.1 MGP_CBAJ_G0023478.1 mouse_genomes_project 17 48086598 48108937 + Pla2g7 protein_coding processed_transcript MGP_CBAJ_T0047390.1 MGP_CBAJ_G0023478.1 mouse_genomes_project 17 48086636 48127429 + MGP_CBAJ_P0047390 Pla2g7 protein_coding protein_coding MGP_CBAJ_T0047391.1 MGP_CBAJ_G0023478.1 mouse_genomes_project 17 48086678 48127804 + Pla2g7 protein_coding retained_intron MGP_CBAJ_T0047504.1 MGP_CBAJ_G0023506.1 mouse_genomes_project 17 51005438 51013767 + MGP_CBAJ_P0047504 Gtpbp2 protein_coding protein_coding MGP_CBAJ_T0047505.1 MGP_CBAJ_G0023506.1 mouse_genomes_project 17 51005438 51013765 + MGP_CBAJ_P0047505 Gtpbp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047506.1 MGP_CBAJ_G0023506.1 mouse_genomes_project 17 51005455 51007902 + Gtpbp2 protein_coding processed_transcript MGP_CBAJ_T0047507.1 MGP_CBAJ_G0023506.1 mouse_genomes_project 17 51005472 51013733 + MGP_CBAJ_P0047507 Gtpbp2 protein_coding protein_coding MGP_CBAJ_T0047508.1 MGP_CBAJ_G0023506.1 mouse_genomes_project 17 51005516 51008704 + MGP_CBAJ_P0047508 Gtpbp2 protein_coding protein_coding MGP_CBAJ_T0047509.1 MGP_CBAJ_G0023506.1 mouse_genomes_project 17 51005557 51006555 + Gtpbp2 protein_coding processed_transcript MGP_CBAJ_T0047510.1 MGP_CBAJ_G0023506.1 mouse_genomes_project 17 51005691 51009147 + Gtpbp2 protein_coding processed_transcript MGP_CBAJ_T0047511.1 MGP_CBAJ_G0023506.1 mouse_genomes_project 17 51007429 51009218 + Gtpbp2 protein_coding retained_intron MGP_CBAJ_T0047512.1 MGP_CBAJ_G0023506.1 mouse_genomes_project 17 51007622 51010192 + Gtpbp2 protein_coding processed_transcript MGP_CBAJ_T0047513.1 MGP_CBAJ_G0023506.1 mouse_genomes_project 17 51007714 51009585 + Gtpbp2 protein_coding retained_intron MGP_CBAJ_T0047514.1 MGP_CBAJ_G0023506.1 mouse_genomes_project 17 51010092 51012279 + Gtpbp2 protein_coding retained_intron MGP_CBAJ_T0047515.1 MGP_CBAJ_G0023506.1 mouse_genomes_project 17 51010174 51011729 + Gtpbp2 protein_coding retained_intron MGP_CBAJ_T0047516.1 MGP_CBAJ_G0023506.1 mouse_genomes_project 17 51010827 51012631 + MGP_CBAJ_P0047516 Gtpbp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047517.1 MGP_CBAJ_G0023506.1 mouse_genomes_project 17 51011263 51012418 + Gtpbp2 protein_coding retained_intron MGP_CBAJ_T0047518.1 MGP_CBAJ_G0023506.1 mouse_genomes_project 17 51011384 51012608 + Gtpbp2 protein_coding retained_intron MGP_CBAJ_T0047519.1 MGP_CBAJ_G0023506.1 mouse_genomes_project 17 51011627 51012791 + MGP_CBAJ_P0047519 Gtpbp2 protein_coding protein_coding MGP_CBAJ_T0047520.1 MGP_CBAJ_G0023506.1 mouse_genomes_project 17 51012032 51012807 + Gtpbp2 protein_coding retained_intron MGP_CBAJ_T0045822.1 MGP_CBAJ_G0023066.1 mouse_genomes_project 17 26842932 26849795 + MGP_CBAJ_P0045822 Ccdc78 protein_coding protein_coding MGP_CBAJ_T0047877.1 MGP_CBAJ_G0023623.1 mouse_genomes_project 17 62586898 62613374 + MGP_CBAJ_P0047877 Uhrf1 protein_coding protein_coding MGP_CBAJ_T0047878.1 MGP_CBAJ_G0023623.1 mouse_genomes_project 17 62586977 62613374 + MGP_CBAJ_P0047878 Uhrf1 protein_coding protein_coding MGP_CBAJ_T0047879.1 MGP_CBAJ_G0023623.1 mouse_genomes_project 17 62587890 62613374 + MGP_CBAJ_P0047879 Uhrf1 protein_coding protein_coding MGP_CBAJ_T0047880.1 MGP_CBAJ_G0023623.1 mouse_genomes_project 17 62587925 62613374 + MGP_CBAJ_P0047880 Uhrf1 protein_coding protein_coding MGP_CBAJ_T0047881.1 MGP_CBAJ_G0023623.1 mouse_genomes_project 17 62587984 62594297 + MGP_CBAJ_P0047881 Uhrf1 protein_coding protein_coding MGP_CBAJ_T0047882.1 MGP_CBAJ_G0023623.1 mouse_genomes_project 17 62596209 62596723 + Uhrf1 protein_coding retained_intron MGP_CBAJ_T0047883.1 MGP_CBAJ_G0023623.1 mouse_genomes_project 17 62602526 62607709 + Uhrf1 protein_coding retained_intron MGP_CBAJ_T0097991.1 MGP_CBAJ_G0036264.1 mouse_genomes_project 17 106080730 106080837 + Gm23964 rRNA rRNA MGP_CBAJ_T0013076.1 MGP_CBAJ_G0011188.1 mouse_genomes_project 17 39896260 39896833 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010097.1 MGP_CBAJ_G0008235.1 mouse_genomes_project 17 63677972 63678029 - Mir6978 miRNA miRNA MGP_CBAJ_T0045366.1 MGP_CBAJ_G0022942.1 mouse_genomes_project 17 22142692 22174842 + MGP_CBAJ_P0045366 Zfp943 protein_coding protein_coding MGP_CBAJ_T0045367.1 MGP_CBAJ_G0022942.1 mouse_genomes_project 17 22142692 22177164 + MGP_CBAJ_P0045367 Zfp943 protein_coding protein_coding MGP_CBAJ_T0045368.1 MGP_CBAJ_G0022942.1 mouse_genomes_project 17 22142719 22291870 + MGP_CBAJ_P0045368 Zfp943 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045369.1 MGP_CBAJ_G0022942.1 mouse_genomes_project 17 22200298 22206174 + Zfp943 protein_coding processed_transcript MGP_CBAJ_T0046482.1 MGP_CBAJ_G0023228.1 mouse_genomes_project 17 35846731 35879884 - MGP_CBAJ_P0046482 Zfp81 protein_coding protein_coding MGP_CBAJ_T0099020.1 MGP_CBAJ_G0037275.1 mouse_genomes_project 17 105657879 105657988 - Gm22593 snRNA snRNA MGP_CBAJ_T0003648.1 MGP_CBAJ_G0003288.1 mouse_genomes_project 17 24493938 24499760 + Gm16275 antisense antisense MGP_CBAJ_T0045378.1 MGP_CBAJ_G0022948.1 mouse_genomes_project 17 22761913 22787279 + Zfp946 protein_coding processed_transcript MGP_CBAJ_T0045379.1 MGP_CBAJ_G0022948.1 mouse_genomes_project 17 22761950 22796869 + MGP_CBAJ_P0045379 Zfp946 protein_coding protein_coding MGP_CBAJ_T0045380.1 MGP_CBAJ_G0022948.1 mouse_genomes_project 17 22761959 22796869 + MGP_CBAJ_P0045380 Zfp946 protein_coding protein_coding MGP_CBAJ_T0045381.1 MGP_CBAJ_G0022948.1 mouse_genomes_project 17 22790979 22796018 + MGP_CBAJ_P0045381 Zfp946 protein_coding protein_coding MGP_CBAJ_T0100259.1 MGP_CBAJ_G0038514.1 mouse_genomes_project 17 69631405 69631539 - Gm25800 snoRNA snoRNA MGP_CBAJ_T0045977.1 MGP_CBAJ_G0023101.1 mouse_genomes_project 17 27756718 27760870 + MGP_CBAJ_P0045977 Gm8225 protein_coding protein_coding MGP_CBAJ_T0017333.1 MGP_CBAJ_G0015097.1 mouse_genomes_project 17 95784640 95799816 - Six3os1 processed_transcript antisense MGP_CBAJ_T0017334.1 MGP_CBAJ_G0015097.1 mouse_genomes_project 17 95785923 95802842 - Six3os1 processed_transcript antisense MGP_CBAJ_T0017335.1 MGP_CBAJ_G0015097.1 mouse_genomes_project 17 95791836 95802835 - Six3os1 processed_transcript antisense MGP_CBAJ_T0017336.1 MGP_CBAJ_G0015097.1 mouse_genomes_project 17 95792403 95802868 - Six3os1 processed_transcript antisense MGP_CBAJ_T0017337.1 MGP_CBAJ_G0015097.1 mouse_genomes_project 17 95794028 95802810 - Six3os1 processed_transcript antisense MGP_CBAJ_T0017338.1 MGP_CBAJ_G0015097.1 mouse_genomes_project 17 95794970 95802745 - Six3os1 processed_transcript antisense MGP_CBAJ_T0017339.1 MGP_CBAJ_G0015097.1 mouse_genomes_project 17 95795715 95802855 - Six3os1 processed_transcript retained_intron MGP_CBAJ_T0017340.1 MGP_CBAJ_G0015097.1 mouse_genomes_project 17 95796098 95802691 - Six3os1 processed_transcript antisense MGP_CBAJ_T0017341.1 MGP_CBAJ_G0015097.1 mouse_genomes_project 17 95796098 95802693 - Six3os1 processed_transcript antisense MGP_CBAJ_T0017342.1 MGP_CBAJ_G0015097.1 mouse_genomes_project 17 95797351 95802745 - Six3os1 processed_transcript antisense MGP_CBAJ_T0017343.1 MGP_CBAJ_G0015097.1 mouse_genomes_project 17 95797679 95800714 - Six3os1 processed_transcript antisense MGP_CBAJ_T0017344.1 MGP_CBAJ_G0015097.1 mouse_genomes_project 17 95798162 95802543 - Six3os1 processed_transcript antisense MGP_CBAJ_T0017345.1 MGP_CBAJ_G0015097.1 mouse_genomes_project 17 95798163 95802828 - Six3os1 processed_transcript antisense MGP_CBAJ_T0013115.1 MGP_CBAJ_G0011227.1 mouse_genomes_project 17 76269788 76270319 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0045318.1 MGP_CBAJ_G0022912.1 mouse_genomes_project 17 20480175 20501564 - MGP_CBAJ_P0045318 Vmn2r108 protein_coding protein_coding MGP_CBAJ_T0046274.1 MGP_CBAJ_G0023168.1 mouse_genomes_project 17 31458828 31489216 + MGP_CBAJ_P0046274 Rnf8 protein_coding protein_coding MGP_CBAJ_T0046275.1 MGP_CBAJ_G0023168.1 mouse_genomes_project 17 31458860 31474497 + MGP_CBAJ_P0046275 Rnf8 protein_coding protein_coding MGP_CBAJ_T0046276.1 MGP_CBAJ_G0023168.1 mouse_genomes_project 17 31458892 31489139 + MGP_CBAJ_P0046276 Rnf8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046278.1 MGP_CBAJ_G0023168.1 mouse_genomes_project 17 31458928 31463598 + Rnf8 protein_coding processed_transcript MGP_CBAJ_T0046279.1 MGP_CBAJ_G0023168.1 mouse_genomes_project 17 31460175 31474530 + MGP_CBAJ_P0046279 Rnf8 protein_coding protein_coding MGP_CBAJ_T0046280.1 MGP_CBAJ_G0023168.1 mouse_genomes_project 17 31476092 31483390 + Rnf8 protein_coding retained_intron MGP_CBAJ_T0046281.1 MGP_CBAJ_G0023168.1 mouse_genomes_project 17 31479016 31489087 + Rnf8 protein_coding retained_intron MGP_CBAJ_T0046282.1 MGP_CBAJ_G0023168.1 mouse_genomes_project 17 31481955 31489108 + Rnf8 protein_coding retained_intron MGP_CBAJ_T0046707.1 MGP_CBAJ_G0023273.1 mouse_genomes_project 17 37067675 37077735 + MGP_CBAJ_P0046707 H2-Eb1 protein_coding protein_coding MGP_CBAJ_T0045114.1 MGP_CBAJ_G0022838.1 mouse_genomes_project 17 6406525 6414606 + MGP_CBAJ_P0045114 T protein_coding protein_coding MGP_CBAJ_T0045115.1 MGP_CBAJ_G0022838.1 mouse_genomes_project 17 6407027 6409102 + MGP_CBAJ_P0045115 T protein_coding protein_coding MGP_CBAJ_T0045116.1 MGP_CBAJ_G0022838.1 mouse_genomes_project 17 6407513 6413852 + MGP_CBAJ_P0045116 T protein_coding protein_coding MGP_CBAJ_T0017287.1 MGP_CBAJ_G0015078.1 mouse_genomes_project 17 12330522 12339863 - Gm16046 processed_transcript processed_transcript MGP_CBAJ_T0017288.1 MGP_CBAJ_G0015078.1 mouse_genomes_project 17 12334017 12339853 - Gm16046 processed_transcript processed_transcript MGP_CBAJ_T0017289.1 MGP_CBAJ_G0015078.1 mouse_genomes_project 17 12334497 12339882 - Gm16046 processed_transcript processed_transcript MGP_CBAJ_T0003692.1 MGP_CBAJ_G0003320.1 mouse_genomes_project 17 49197152 49198339 + Runx2os3 antisense antisense MGP_CBAJ_T0047894.1 MGP_CBAJ_G0023627.1 mouse_genomes_project 17 62891189 62894741 - MGP_CBAJ_P0047894 Safb2 protein_coding protein_coding MGP_CBAJ_T0047895.1 MGP_CBAJ_G0023627.1 mouse_genomes_project 17 62891197 62894792 - MGP_CBAJ_P0047895 Safb2 protein_coding protein_coding MGP_CBAJ_T0047896.1 MGP_CBAJ_G0023627.1 mouse_genomes_project 17 62893163 62915318 - MGP_CBAJ_P0047896 Safb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047897.1 MGP_CBAJ_G0023627.1 mouse_genomes_project 17 62893163 62915391 - MGP_CBAJ_P0047897 Safb2 protein_coding protein_coding MGP_CBAJ_T0047898.1 MGP_CBAJ_G0023627.1 mouse_genomes_project 17 62893163 62897240 - MGP_CBAJ_P0047898 Safb2 protein_coding protein_coding MGP_CBAJ_T0047899.1 MGP_CBAJ_G0023627.1 mouse_genomes_project 17 62893173 62902820 - Safb2 protein_coding processed_transcript MGP_CBAJ_T0047900.1 MGP_CBAJ_G0023627.1 mouse_genomes_project 17 62893529 62897243 - MGP_CBAJ_P0047900 Safb2 protein_coding protein_coding MGP_CBAJ_T0047901.1 MGP_CBAJ_G0023627.1 mouse_genomes_project 17 62896221 62901728 - MGP_CBAJ_P0047901 Safb2 protein_coding protein_coding MGP_CBAJ_T0047902.1 MGP_CBAJ_G0023627.1 mouse_genomes_project 17 62897757 62899704 - Safb2 protein_coding retained_intron MGP_CBAJ_T0047903.1 MGP_CBAJ_G0023627.1 mouse_genomes_project 17 62899164 62905419 - Safb2 protein_coding retained_intron MGP_CBAJ_T0047904.1 MGP_CBAJ_G0023627.1 mouse_genomes_project 17 62900370 62905556 - Safb2 protein_coding retained_intron MGP_CBAJ_T0047905.1 MGP_CBAJ_G0023627.1 mouse_genomes_project 17 62901315 62901967 - Safb2 protein_coding retained_intron MGP_CBAJ_T0047906.1 MGP_CBAJ_G0023627.1 mouse_genomes_project 17 62901557 62915368 - MGP_CBAJ_P0047906 Safb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047907.1 MGP_CBAJ_G0023627.1 mouse_genomes_project 17 62907038 62913784 - Safb2 protein_coding retained_intron MGP_CBAJ_T0047908.1 MGP_CBAJ_G0023627.1 mouse_genomes_project 17 62907167 62915107 - Safb2 protein_coding retained_intron MGP_CBAJ_T0047909.1 MGP_CBAJ_G0023627.1 mouse_genomes_project 17 62909580 62915317 - Safb2 protein_coding retained_intron MGP_CBAJ_T0048350.1 MGP_CBAJ_G0023794.1 mouse_genomes_project 17 97347078 97350787 - MGP_CBAJ_P0048350 Atp6v1e2 protein_coding protein_coding MGP_CBAJ_T0045130.1 MGP_CBAJ_G0022842.1 mouse_genomes_project 17 7818696 7821904 - MGP_CBAJ_P0045130 Pabpc6 protein_coding protein_coding MGP_CBAJ_T0006844.1 MGP_CBAJ_G0005632.1 mouse_genomes_project 17 38978530 39003578 - Gm20442 lincRNA lincRNA MGP_CBAJ_T0048239.1 MGP_CBAJ_G0023743.1 mouse_genomes_project 17 88270518 88292811 - MGP_CBAJ_P0048239 Cebpz protein_coding protein_coding MGP_CBAJ_T0047345.1 MGP_CBAJ_G0023449.1 mouse_genomes_project 17 42803438 42804146 - MGP_CBAJ_P0047345 Gm21903 protein_coding protein_coding MGP_CBAJ_T0046657.1 MGP_CBAJ_G0023261.1 mouse_genomes_project 17 36794144 36803850 - MGP_CBAJ_P0046657 Brd2 protein_coding protein_coding MGP_CBAJ_T0046658.1 MGP_CBAJ_G0023261.1 mouse_genomes_project 17 36794144 36804422 - MGP_CBAJ_P0046658 Brd2 protein_coding protein_coding MGP_CBAJ_T0046659.1 MGP_CBAJ_G0023261.1 mouse_genomes_project 17 36794151 36802514 - MGP_CBAJ_P0046659 Brd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046660.1 MGP_CBAJ_G0023261.1 mouse_genomes_project 17 36794484 36800592 - MGP_CBAJ_P0046660 Brd2 protein_coding protein_coding MGP_CBAJ_T0046661.1 MGP_CBAJ_G0023261.1 mouse_genomes_project 17 36794805 36795854 - Brd2 protein_coding retained_intron MGP_CBAJ_T0046662.1 MGP_CBAJ_G0023261.1 mouse_genomes_project 17 36795880 36797071 - Brd2 protein_coding retained_intron MGP_CBAJ_T0046663.1 MGP_CBAJ_G0023261.1 mouse_genomes_project 17 36795882 36797097 - MGP_CBAJ_P0046663 Brd2 protein_coding protein_coding MGP_CBAJ_T0046664.1 MGP_CBAJ_G0023261.1 mouse_genomes_project 17 36795917 36797196 - MGP_CBAJ_P0046664 Brd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046665.1 MGP_CBAJ_G0023261.1 mouse_genomes_project 17 36796206 36804093 - MGP_CBAJ_P0046665 Brd2 protein_coding protein_coding MGP_CBAJ_T0046666.1 MGP_CBAJ_G0023261.1 mouse_genomes_project 17 36796883 36797590 - Brd2 protein_coding retained_intron MGP_CBAJ_T0046667.1 MGP_CBAJ_G0023261.1 mouse_genomes_project 17 36801630 36804055 - Brd2 protein_coding processed_transcript MGP_CBAJ_T0046668.1 MGP_CBAJ_G0023261.1 mouse_genomes_project 17 36801660 36804724 - Brd2 protein_coding processed_transcript MGP_CBAJ_T0046669.1 MGP_CBAJ_G0023261.1 mouse_genomes_project 17 36801969 36804739 - Brd2 protein_coding processed_transcript MGP_CBAJ_T0047521.1 MGP_CBAJ_G0023507.1 mouse_genomes_project 17 51016406 51058716 - MGP_CBAJ_P0047521 Polh protein_coding protein_coding MGP_CBAJ_T0101688.1 MGP_CBAJ_G0039719.1 mouse_genomes_project 17 19624534 19625895 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0045241.1 MGP_CBAJ_G0022876.1 mouse_genomes_project 17 14294596 14332856 + MGP_CBAJ_P0045241 Fam120b protein_coding protein_coding MGP_CBAJ_T0048037.1 MGP_CBAJ_G0023683.1 mouse_genomes_project 17 73656180 73690065 - MGP_CBAJ_P0048037 Ndufv2 protein_coding protein_coding MGP_CBAJ_T0048038.1 MGP_CBAJ_G0023683.1 mouse_genomes_project 17 73656407 73690095 - MGP_CBAJ_P0048038 Ndufv2 protein_coding protein_coding MGP_CBAJ_T0048039.1 MGP_CBAJ_G0023683.1 mouse_genomes_project 17 73671105 73690109 - MGP_CBAJ_P0048039 Ndufv2 protein_coding protein_coding MGP_CBAJ_T0046515.1 MGP_CBAJ_G0023235.1 mouse_genomes_project 17 36208209 36248631 - MGP_CBAJ_P0046515 Hnrnpm protein_coding protein_coding MGP_CBAJ_T0046516.1 MGP_CBAJ_G0023235.1 mouse_genomes_project 17 36208211 36247162 - MGP_CBAJ_P0046516 Hnrnpm protein_coding protein_coding MGP_CBAJ_T0046517.1 MGP_CBAJ_G0023235.1 mouse_genomes_project 17 36208212 36247158 - MGP_CBAJ_P0046517 Hnrnpm protein_coding protein_coding MGP_CBAJ_T0046518.1 MGP_CBAJ_G0023235.1 mouse_genomes_project 17 36208215 36247158 - MGP_CBAJ_P0046518 Hnrnpm protein_coding protein_coding MGP_CBAJ_T0046519.1 MGP_CBAJ_G0023235.1 mouse_genomes_project 17 36208215 36222213 - MGP_CBAJ_P0046519 Hnrnpm protein_coding protein_coding MGP_CBAJ_T0046520.1 MGP_CBAJ_G0023235.1 mouse_genomes_project 17 36212237 36228337 - MGP_CBAJ_P0046520 Hnrnpm protein_coding protein_coding MGP_CBAJ_T0046521.1 MGP_CBAJ_G0023235.1 mouse_genomes_project 17 36230403 36247155 - Hnrnpm protein_coding retained_intron MGP_CBAJ_T0046522.1 MGP_CBAJ_G0023235.1 mouse_genomes_project 17 36238706 36247171 - Hnrnpm protein_coding retained_intron MGP_CBAJ_T0003637.1 MGP_CBAJ_G0003283.1 mouse_genomes_project 17 8734323 8807975 + Gm16168 antisense antisense MGP_CBAJ_T0003638.1 MGP_CBAJ_G0003283.1 mouse_genomes_project 17 8734330 8791772 + Gm16168 antisense antisense MGP_CBAJ_T0047108.1 MGP_CBAJ_G0023360.1 mouse_genomes_project 17 39113405 39120187 + MGP_CBAJ_P0047108 Nrm protein_coding protein_coding MGP_CBAJ_T0047109.1 MGP_CBAJ_G0023360.1 mouse_genomes_project 17 39113425 39119448 + MGP_CBAJ_P0047109 Nrm protein_coding protein_coding MGP_CBAJ_T0047110.1 MGP_CBAJ_G0023360.1 mouse_genomes_project 17 39113573 39119388 + MGP_CBAJ_P0047110 Nrm protein_coding protein_coding MGP_CBAJ_T0047239.1 MGP_CBAJ_G0023391.1 mouse_genomes_project 17 40411694 40416747 + MGP_CBAJ_P0047239 Rnf39 protein_coding protein_coding MGP_CBAJ_T0047240.1 MGP_CBAJ_G0023391.1 mouse_genomes_project 17 40411831 40414376 + MGP_CBAJ_P0047240 Rnf39 protein_coding protein_coding MGP_CBAJ_T0047241.1 MGP_CBAJ_G0023391.1 mouse_genomes_project 17 40413838 40416047 + MGP_CBAJ_P0047241 Rnf39 protein_coding protein_coding MGP_CBAJ_T0045840.1 MGP_CBAJ_G0023073.1 mouse_genomes_project 17 26896534 26903828 - MGP_CBAJ_P0045840 Gm20683 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047337.1 MGP_CBAJ_G0023444.1 mouse_genomes_project 17 41947593 41958800 + MGP_CBAJ_P0047337 Olfr138 protein_coding protein_coding MGP_CBAJ_T0047338.1 MGP_CBAJ_G0023444.1 mouse_genomes_project 17 41947594 41959660 + MGP_CBAJ_P0047338 Olfr138 protein_coding protein_coding MGP_CBAJ_T0047339.1 MGP_CBAJ_G0023444.1 mouse_genomes_project 17 41947604 41959090 + MGP_CBAJ_P0047339 Olfr138 protein_coding protein_coding MGP_CBAJ_T0047340.1 MGP_CBAJ_G0023444.1 mouse_genomes_project 17 41958721 41959660 + MGP_CBAJ_P0047340 Olfr138 protein_coding protein_coding MGP_CBAJ_T0048318.1 MGP_CBAJ_G0023780.1 mouse_genomes_project 17 94701785 94733325 - MGP_CBAJ_P0048318 Abcg5 protein_coding protein_coding MGP_CBAJ_T0048319.1 MGP_CBAJ_G0023780.1 mouse_genomes_project 17 94702039 94732516 - MGP_CBAJ_P0048319 Abcg5 protein_coding protein_coding MGP_CBAJ_T0048320.1 MGP_CBAJ_G0023780.1 mouse_genomes_project 17 94716508 94720957 - Abcg5 protein_coding processed_transcript MGP_CBAJ_T0048321.1 MGP_CBAJ_G0023780.1 mouse_genomes_project 17 94716986 94723037 - Abcg5 protein_coding retained_intron MGP_CBAJ_T0011311.1 MGP_CBAJ_G0009449.1 mouse_genomes_project 17 95797860 95798086 + Gm27801 misc_RNA misc_RNA MGP_CBAJ_T0045305.1 MGP_CBAJ_G0022899.1 mouse_genomes_project 17 19182184 19218253 + MGP_CBAJ_P0045305 Vmn2r99 protein_coding protein_coding MGP_CBAJ_T0010058.1 MGP_CBAJ_G0008196.1 mouse_genomes_project 17 25485642 25485736 + Gm24589 miRNA miRNA MGP_CBAJ_T0013043.1 MGP_CBAJ_G0011155.1 mouse_genomes_project 17 14507042 14511699 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0045839.1 MGP_CBAJ_G0023072.1 mouse_genomes_project 17 26892705 26895431 - MGP_CBAJ_P0045839 Stub1 protein_coding protein_coding MGP_CBAJ_T0000952.1 MGP_CBAJ_G0000884.1 mouse_genomes_project 17 57426704 57430896 - TEC TEC MGP_CBAJ_T0045080.1 MGP_CBAJ_G0022828.1 mouse_genomes_project 17 5831576 5890409 + MGP_CBAJ_P0045080 protein_coding protein_coding MGP_CBAJ_T0098189.1 MGP_CBAJ_G0036462.1 mouse_genomes_project 17 4745551 4745639 - Gm22416 scaRNA scaRNA MGP_CBAJ_T0101738.1 MGP_CBAJ_G0039769.1 mouse_genomes_project 17 39996994 39999846 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047869.1 MGP_CBAJ_G0023617.1 mouse_genomes_project 17 62395004 62406752 + MGP_CBAJ_P0047869 Tnfaip8l1 protein_coding protein_coding MGP_CBAJ_T0013070.1 MGP_CBAJ_G0011182.1 mouse_genomes_project 17 39605844 39606087 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0045453.1 MGP_CBAJ_G0022974.1 mouse_genomes_project 17 24558105 24562410 - MGP_CBAJ_P0045453 Tceb2 protein_coding protein_coding MGP_CBAJ_T0101706.1 MGP_CBAJ_G0039737.1 mouse_genomes_project 17 27458039 27458738 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0097788.1 MGP_CBAJ_G0036061.1 mouse_genomes_project 17 87469442 87469801 - pseudogene pseudogene MGP_CBAJ_T0097789.1 MGP_CBAJ_G0036062.1 mouse_genomes_project 17 90340099 90340491 + pseudogene pseudogene MGP_CBAJ_T0046637.1 MGP_CBAJ_G0023258.1 mouse_genomes_project 17 36700628 36707373 + MGP_CBAJ_P0046637 Rxrb protein_coding protein_coding MGP_CBAJ_T0046638.1 MGP_CBAJ_G0023258.1 mouse_genomes_project 17 36700999 36706680 + MGP_CBAJ_P0046638 Rxrb protein_coding protein_coding MGP_CBAJ_T0046639.1 MGP_CBAJ_G0023258.1 mouse_genomes_project 17 36701012 36703022 + MGP_CBAJ_P0046639 Rxrb protein_coding protein_coding MGP_CBAJ_T0046640.1 MGP_CBAJ_G0023258.1 mouse_genomes_project 17 36701191 36706795 + MGP_CBAJ_P0046640 Rxrb protein_coding protein_coding MGP_CBAJ_T0046641.1 MGP_CBAJ_G0023258.1 mouse_genomes_project 17 36701217 36707373 + MGP_CBAJ_P0046641 Rxrb protein_coding protein_coding MGP_CBAJ_T0046642.1 MGP_CBAJ_G0023258.1 mouse_genomes_project 17 36702369 36704990 + Rxrb protein_coding retained_intron MGP_CBAJ_T0046643.1 MGP_CBAJ_G0023258.1 mouse_genomes_project 17 36702727 36705353 + Rxrb protein_coding retained_intron MGP_CBAJ_T0046644.1 MGP_CBAJ_G0023258.1 mouse_genomes_project 17 36705302 36706254 + Rxrb protein_coding retained_intron MGP_CBAJ_T0046645.1 MGP_CBAJ_G0023258.1 mouse_genomes_project 17 36705346 36706287 + Rxrb protein_coding retained_intron MGP_CBAJ_T0046646.1 MGP_CBAJ_G0023258.1 mouse_genomes_project 17 36705442 36706514 + Rxrb protein_coding retained_intron MGP_CBAJ_T0047289.1 MGP_CBAJ_G0023402.1 mouse_genomes_project 17 40631696 40678649 - MGP_CBAJ_P0047289 protein_coding protein_coding MGP_CBAJ_T0006821.1 MGP_CBAJ_G0005614.1 mouse_genomes_project 17 30108566 30110657 + E230001N04Rik lincRNA lincRNA MGP_CBAJ_T0006822.1 MGP_CBAJ_G0005614.1 mouse_genomes_project 17 30108602 30110657 + E230001N04Rik lincRNA lincRNA MGP_CBAJ_T0047181.1 MGP_CBAJ_G0023370.1 mouse_genomes_project 17 39291203 39300992 - MGP_CBAJ_P0047181 H2-T24 protein_coding protein_coding MGP_CBAJ_T0047182.1 MGP_CBAJ_G0023370.1 mouse_genomes_project 17 39291777 39300957 - MGP_CBAJ_P0047182 H2-T24 protein_coding protein_coding MGP_CBAJ_T0100243.1 MGP_CBAJ_G0038498.1 mouse_genomes_project 17 11413472 11413600 + Snora20 snoRNA snoRNA MGP_CBAJ_T0101734.1 MGP_CBAJ_G0039765.1 mouse_genomes_project 17 39944632 39945824 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047824.1 MGP_CBAJ_G0023594.1 mouse_genomes_project 17 60282826 60311744 - MGP_CBAJ_P0047824 Slc5a7 protein_coding unknown_likely_coding MGP_CBAJ_T0048236.1 MGP_CBAJ_G0023742.1 mouse_genomes_project 17 88267994 88271819 + MGP_CBAJ_P0048236 Cebpzos protein_coding protein_coding MGP_CBAJ_T0048237.1 MGP_CBAJ_G0023742.1 mouse_genomes_project 17 88268011 88271819 + MGP_CBAJ_P0048237 Cebpzos protein_coding protein_coding MGP_CBAJ_T0048238.1 MGP_CBAJ_G0023742.1 mouse_genomes_project 17 88268194 88269951 + MGP_CBAJ_P0048238 Cebpzos protein_coding protein_coding MGP_CBAJ_T0046831.1 MGP_CBAJ_G0023298.1 mouse_genomes_project 17 37817072 37819724 - MGP_CBAJ_P0046831 Cfb protein_coding protein_coding MGP_CBAJ_T0046832.1 MGP_CBAJ_G0023298.1 mouse_genomes_project 17 37817082 37823213 - MGP_CBAJ_P0046832 Cfb protein_coding protein_coding MGP_CBAJ_T0046833.1 MGP_CBAJ_G0023298.1 mouse_genomes_project 17 37817089 37818841 - MGP_CBAJ_P0046833 Cfb protein_coding protein_coding MGP_CBAJ_T0046834.1 MGP_CBAJ_G0023298.1 mouse_genomes_project 17 37817110 37820009 - MGP_CBAJ_P0046834 Cfb protein_coding protein_coding MGP_CBAJ_T0046837.1 MGP_CBAJ_G0023298.1 mouse_genomes_project 17 37817125 37822805 - MGP_CBAJ_P0046837 Cfb protein_coding protein_coding MGP_CBAJ_T0046838.1 MGP_CBAJ_G0023298.1 mouse_genomes_project 17 37817272 37819740 - MGP_CBAJ_P0046838 Cfb protein_coding nonsense_mediated_decay MGP_CBAJ_T0045598.1 MGP_CBAJ_G0023012.1 mouse_genomes_project 17 25549827 25550964 - MGP_CBAJ_P0045598 Npw protein_coding protein_coding MGP_CBAJ_T0047609.1 MGP_CBAJ_G0023534.1 mouse_genomes_project 17 51690438 51698418 - MGP_CBAJ_P0047609 Ptcra protein_coding protein_coding MGP_CBAJ_T0047406.1 MGP_CBAJ_G0023485.1 mouse_genomes_project 17 48810177 48871113 + MGP_CBAJ_P0047406 Clic5 protein_coding protein_coding MGP_CBAJ_T0048266.1 MGP_CBAJ_G0023754.1 mouse_genomes_project 17 89719949 89727166 - MGP_CBAJ_P0048266 Srsf7 protein_coding protein_coding MGP_CBAJ_T0101715.1 MGP_CBAJ_G0039746.1 mouse_genomes_project 17 37334218 37369475 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0046382.1 MGP_CBAJ_G0023195.1 mouse_genomes_project 17 34257535 34359425 - MGP_CBAJ_P0046382 Hsf2bp protein_coding protein_coding MGP_CBAJ_T0046383.1 MGP_CBAJ_G0023195.1 mouse_genomes_project 17 34336251 34348136 - Hsf2bp protein_coding processed_transcript MGP_CBAJ_T0046995.1 MGP_CBAJ_G0023333.1 mouse_genomes_project 17 38206493 38209123 - MGP_CBAJ_P0046995 Tnf protein_coding protein_coding MGP_CBAJ_T0046996.1 MGP_CBAJ_G0023333.1 mouse_genomes_project 17 38206619 38209120 - MGP_CBAJ_P0046996 Tnf protein_coding protein_coding MGP_CBAJ_T0045155.1 MGP_CBAJ_G0022852.1 mouse_genomes_project 17 11140247 11244468 - MGP_CBAJ_P0045155 Igf2r protein_coding protein_coding MGP_CBAJ_T0045156.1 MGP_CBAJ_G0022852.1 mouse_genomes_project 17 11158874 11161627 - MGP_CBAJ_P0045156 Igf2r protein_coding nonsense_mediated_decay MGP_CBAJ_T0045157.1 MGP_CBAJ_G0022852.1 mouse_genomes_project 17 11211585 11223681 - MGP_CBAJ_P0045157 Igf2r protein_coding protein_coding MGP_CBAJ_T0097790.1 MGP_CBAJ_G0036063.1 mouse_genomes_project 17 101353336 101353949 + pseudogene pseudogene MGP_CBAJ_T0006882.1 MGP_CBAJ_G0005656.1 mouse_genomes_project 17 83370572 83418030 - Gm26749 lincRNA lincRNA MGP_CBAJ_T0045917.1 MGP_CBAJ_G0023087.1 mouse_genomes_project 17 27203536 27214240 - MGP_CBAJ_P0045917 Decr2 protein_coding protein_coding MGP_CBAJ_T0045918.1 MGP_CBAJ_G0023087.1 mouse_genomes_project 17 27206998 27208035 - Decr2 protein_coding processed_transcript MGP_CBAJ_T0045919.1 MGP_CBAJ_G0023087.1 mouse_genomes_project 17 27207751 27214240 - Decr2 protein_coding retained_intron MGP_CBAJ_T0045920.1 MGP_CBAJ_G0023087.1 mouse_genomes_project 17 27208208 27214230 - Decr2 protein_coding processed_transcript MGP_CBAJ_T0045921.1 MGP_CBAJ_G0023087.1 mouse_genomes_project 17 27211364 27214269 - Decr2 protein_coding processed_transcript MGP_CBAJ_T0013098.1 MGP_CBAJ_G0011210.1 mouse_genomes_project 17 59163363 59165735 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0047197.1 MGP_CBAJ_G0023376.1 mouse_genomes_project 17 39639486 39641697 - MGP_CBAJ_P0047197 Rpp21 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047198.1 MGP_CBAJ_G0023376.1 mouse_genomes_project 17 39639508 39641684 - Rpp21 protein_coding retained_intron MGP_CBAJ_T0047199.1 MGP_CBAJ_G0023376.1 mouse_genomes_project 17 39639508 39641905 - MGP_CBAJ_P0047199 Rpp21 protein_coding protein_coding MGP_CBAJ_T0047200.1 MGP_CBAJ_G0023376.1 mouse_genomes_project 17 39639514 39640192 - Rpp21 protein_coding retained_intron MGP_CBAJ_T0047201.1 MGP_CBAJ_G0023376.1 mouse_genomes_project 17 39639553 39641451 - MGP_CBAJ_P0047201 Rpp21 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047202.1 MGP_CBAJ_G0023376.1 mouse_genomes_project 17 39639785 39641696 - Rpp21 protein_coding retained_intron MGP_CBAJ_T0046839.1 MGP_CBAJ_G0023300.1 mouse_genomes_project 17 37823302 37844128 - MGP_CBAJ_P0046839 C2 protein_coding protein_coding MGP_CBAJ_T0046840.1 MGP_CBAJ_G0023300.1 mouse_genomes_project 17 37823303 37844202 - MGP_CBAJ_P0046840 C2 protein_coding protein_coding MGP_CBAJ_T0046841.1 MGP_CBAJ_G0023300.1 mouse_genomes_project 17 37823304 37857390 - MGP_CBAJ_P0046841 C2 protein_coding protein_coding MGP_CBAJ_T0046842.1 MGP_CBAJ_G0023300.1 mouse_genomes_project 17 37824370 37825111 - MGP_CBAJ_P0046842 C2 protein_coding protein_coding MGP_CBAJ_T0046843.1 MGP_CBAJ_G0023300.1 mouse_genomes_project 17 37824867 37825651 - C2 protein_coding retained_intron MGP_CBAJ_T0046844.1 MGP_CBAJ_G0023300.1 mouse_genomes_project 17 37839117 37844069 - C2 protein_coding processed_transcript MGP_CBAJ_T0046846.1 MGP_CBAJ_G0023300.1 mouse_genomes_project 17 37855196 37857400 - C2 protein_coding processed_transcript MGP_CBAJ_T0046847.1 MGP_CBAJ_G0023300.1 mouse_genomes_project 17 37855199 37860116 - C2 protein_coding processed_transcript MGP_CBAJ_T0047925.1 MGP_CBAJ_G0023632.1 mouse_genomes_project 17 62964304 63005866 + MGP_CBAJ_P0047925 Catsperd protein_coding protein_coding MGP_CBAJ_T0048292.1 MGP_CBAJ_G0023769.1 mouse_genomes_project 17 92317726 92318139 + MGP_CBAJ_P0048292 Gm6594 protein_coding protein_coding MGP_CBAJ_T0047732.1 MGP_CBAJ_G0023568.1 mouse_genomes_project 17 53521519 53552389 + MGP_CBAJ_P0047732 Treml2 protein_coding protein_coding MGP_CBAJ_T0047733.1 MGP_CBAJ_G0023568.1 mouse_genomes_project 17 53524004 53563431 + MGP_CBAJ_P0047733 Treml2 protein_coding unknown_likely_coding MGP_CBAJ_T0047777.1 MGP_CBAJ_G0023579.1 mouse_genomes_project 17 54844745 54976080 - MGP_CBAJ_P0047777 Daam2 protein_coding protein_coding MGP_CBAJ_T0047778.1 MGP_CBAJ_G0023579.1 mouse_genomes_project 17 54868837 54976064 - MGP_CBAJ_P0047778 Daam2 protein_coding unknown_likely_coding MGP_CBAJ_T0047873.1 MGP_CBAJ_G0023619.1 mouse_genomes_project 17 62419488 62456308 - MGP_CBAJ_P0047873 Dpp9 protein_coding unknown_likely_coding MGP_CBAJ_T0047598.1 MGP_CBAJ_G0023531.1 mouse_genomes_project 17 51642917 51659841 + Pex6 protein_coding retained_intron MGP_CBAJ_T0047599.1 MGP_CBAJ_G0023531.1 mouse_genomes_project 17 51642917 51659841 + MGP_CBAJ_P0047599 Pex6 protein_coding protein_coding MGP_CBAJ_T0047600.1 MGP_CBAJ_G0023531.1 mouse_genomes_project 17 51642930 51651790 + Pex6 protein_coding processed_transcript MGP_CBAJ_T0047601.1 MGP_CBAJ_G0023531.1 mouse_genomes_project 17 51654544 51656088 + Pex6 protein_coding retained_intron MGP_CBAJ_T0045214.1 MGP_CBAJ_G0022866.1 mouse_genomes_project 17 12969320 12977932 - MGP_CBAJ_P0045214 Dact2 protein_coding protein_coding MGP_CBAJ_T0045215.1 MGP_CBAJ_G0022866.1 mouse_genomes_project 17 12969764 12978324 - MGP_CBAJ_P0045215 Dact2 protein_coding unknown_likely_coding MGP_CBAJ_T0011308.1 MGP_CBAJ_G0009446.1 mouse_genomes_project 17 85119256 85119364 - Gm26124 misc_RNA misc_RNA MGP_CBAJ_T0046177.1 MGP_CBAJ_G0023146.1 mouse_genomes_project 17 30343562 30404092 + MGP_CBAJ_P0046177 Mapk14 protein_coding protein_coding MGP_CBAJ_T0046178.1 MGP_CBAJ_G0023146.1 mouse_genomes_project 17 30343562 30396853 + MGP_CBAJ_P0046178 Mapk14 protein_coding protein_coding MGP_CBAJ_T0046179.1 MGP_CBAJ_G0023146.1 mouse_genomes_project 17 30343562 30404092 + MGP_CBAJ_P0046179 Mapk14 protein_coding protein_coding MGP_CBAJ_T0046180.1 MGP_CBAJ_G0023146.1 mouse_genomes_project 17 30343660 30381774 + MGP_CBAJ_P0046180 Mapk14 protein_coding protein_coding MGP_CBAJ_T0046181.1 MGP_CBAJ_G0023146.1 mouse_genomes_project 17 30343960 30404097 + MGP_CBAJ_P0046181 Mapk14 protein_coding protein_coding MGP_CBAJ_T0046182.1 MGP_CBAJ_G0023146.1 mouse_genomes_project 17 30397307 30402045 + Mapk14 protein_coding retained_intron MGP_CBAJ_T0048416.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 100865918 102036376 - MGP_CBAJ_P0048416 Nrxn1 protein_coding protein_coding MGP_CBAJ_T0048417.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 100865931 102040555 - MGP_CBAJ_P0048417 Nrxn1 protein_coding protein_coding MGP_CBAJ_T0048418.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 100870131 100922884 - MGP_CBAJ_P0048418 Nrxn1 protein_coding protein_coding MGP_CBAJ_T0048419.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 100870133 102036384 - MGP_CBAJ_P0048419 Nrxn1 protein_coding protein_coding MGP_CBAJ_T0048420.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 100870529 101354316 - MGP_CBAJ_P0048420 Nrxn1 protein_coding protein_coding MGP_CBAJ_T0048421.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 100870999 100922888 - MGP_CBAJ_P0048421 Nrxn1 protein_coding protein_coding MGP_CBAJ_T0048422.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 100871026 101354330 - MGP_CBAJ_P0048422 Nrxn1 protein_coding protein_coding MGP_CBAJ_T0048423.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 100871399 102036195 - MGP_CBAJ_P0048423 Nrxn1 protein_coding protein_coding MGP_CBAJ_T0048424.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 100871583 100922628 - Nrxn1 protein_coding processed_transcript MGP_CBAJ_T0048425.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 100871606 102036195 - MGP_CBAJ_P0048425 Nrxn1 protein_coding protein_coding MGP_CBAJ_T0048426.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 100871622 102040217 - MGP_CBAJ_P0048426 Nrxn1 protein_coding protein_coding MGP_CBAJ_T0048427.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 100871622 101354394 - MGP_CBAJ_P0048427 Nrxn1 protein_coding protein_coding MGP_CBAJ_T0048428.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 100872049 101044795 - MGP_CBAJ_P0048428 Nrxn1 protein_coding protein_coding MGP_CBAJ_T0048429.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 100998361 101220050 - Nrxn1 protein_coding processed_transcript MGP_CBAJ_T0048430.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 101044660 102040287 - Nrxn1 protein_coding retained_intron MGP_CBAJ_T0048431.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 101044660 101353270 - Nrxn1 protein_coding retained_intron MGP_CBAJ_T0048432.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 101235247 101491310 - MGP_CBAJ_P0048432 Nrxn1 protein_coding protein_coding MGP_CBAJ_T0048433.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 101235488 101491459 - MGP_CBAJ_P0048433 Nrxn1 protein_coding protein_coding MGP_CBAJ_T0048434.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 101352234 101355017 - Nrxn1 protein_coding retained_intron MGP_CBAJ_T0048435.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 101436004 102035952 - Nrxn1 protein_coding processed_transcript MGP_CBAJ_T0048436.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 101449969 101610807 - MGP_CBAJ_P0048436 Nrxn1 protein_coding unknown_likely_coding MGP_CBAJ_T0048437.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 101492526 101534974 - MGP_CBAJ_P0048437 Nrxn1 protein_coding protein_coding MGP_CBAJ_T0048438.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 101492804 101606907 - MGP_CBAJ_P0048438 Nrxn1 protein_coding protein_coding MGP_CBAJ_T0048439.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 101521099 101534777 - Nrxn1 protein_coding retained_intron MGP_CBAJ_T0048440.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 101606063 102040255 - Nrxn1 protein_coding retained_intron MGP_CBAJ_T0048441.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 101609309 102040275 - Nrxn1 protein_coding retained_intron MGP_CBAJ_T0048442.1 MGP_CBAJ_G0023814.1 mouse_genomes_project 17 102032926 102040237 - Nrxn1 protein_coding retained_intron MGP_CBAJ_T0046477.1 MGP_CBAJ_G0023223.1 mouse_genomes_project 17 35733223 35734160 - MGP_CBAJ_P0046477 protein_coding protein_coding MGP_CBAJ_T0006803.1 MGP_CBAJ_G0005598.1 mouse_genomes_project 17 16141729 16142590 + lincRNA lincRNA MGP_CBAJ_T0013061.1 MGP_CBAJ_G0011173.1 mouse_genomes_project 17 36816020 36816233 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013053.1 MGP_CBAJ_G0011165.1 mouse_genomes_project 17 25272674 25279857 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0046947.1 MGP_CBAJ_G0023324.1 mouse_genomes_project 17 38100263 38109813 - MGP_CBAJ_P0046947 Csnk2b protein_coding protein_coding MGP_CBAJ_T0046948.1 MGP_CBAJ_G0023324.1 mouse_genomes_project 17 38100265 38109670 - MGP_CBAJ_P0046948 Csnk2b protein_coding protein_coding MGP_CBAJ_T0046949.1 MGP_CBAJ_G0023324.1 mouse_genomes_project 17 38100265 38108159 - MGP_CBAJ_P0046949 Csnk2b protein_coding protein_coding MGP_CBAJ_T0046950.1 MGP_CBAJ_G0023324.1 mouse_genomes_project 17 38100267 38109557 - MGP_CBAJ_P0046950 Csnk2b protein_coding protein_coding MGP_CBAJ_T0046951.1 MGP_CBAJ_G0023324.1 mouse_genomes_project 17 38100309 38106456 - MGP_CBAJ_P0046951 Csnk2b protein_coding protein_coding MGP_CBAJ_T0046952.1 MGP_CBAJ_G0023324.1 mouse_genomes_project 17 38106078 38107165 - Csnk2b protein_coding retained_intron MGP_CBAJ_T0046953.1 MGP_CBAJ_G0023324.1 mouse_genomes_project 17 38106079 38110437 - MGP_CBAJ_P0046953 Csnk2b protein_coding protein_coding MGP_CBAJ_T0046954.1 MGP_CBAJ_G0023324.1 mouse_genomes_project 17 38106378 38109414 - MGP_CBAJ_P0046954 Csnk2b protein_coding protein_coding MGP_CBAJ_T0046955.1 MGP_CBAJ_G0023324.1 mouse_genomes_project 17 38108137 38110382 - MGP_CBAJ_P0046955 Csnk2b protein_coding protein_coding MGP_CBAJ_T0046956.1 MGP_CBAJ_G0023324.1 mouse_genomes_project 17 38108901 38109820 - Csnk2b protein_coding retained_intron MGP_CBAJ_T0045274.1 MGP_CBAJ_G0022884.1 mouse_genomes_project 17 16864218 16952618 - MGP_CBAJ_P0045274 Lnpep protein_coding protein_coding MGP_CBAJ_T0098991.1 MGP_CBAJ_G0037246.1 mouse_genomes_project 17 35309259 35309423 - Gm23294 snRNA snRNA MGP_CBAJ_T0047220.1 MGP_CBAJ_G0023386.1 mouse_genomes_project 17 40295569 40296284 + Trim26 protein_coding retained_intron MGP_CBAJ_T0047221.1 MGP_CBAJ_G0023386.1 mouse_genomes_project 17 40295576 40319557 + Trim26 protein_coding retained_intron MGP_CBAJ_T0047222.1 MGP_CBAJ_G0023386.1 mouse_genomes_project 17 40295576 40322908 + MGP_CBAJ_P0047222 Trim26 protein_coding protein_coding MGP_CBAJ_T0047223.1 MGP_CBAJ_G0023386.1 mouse_genomes_project 17 40295578 40322926 + MGP_CBAJ_P0047223 Trim26 protein_coding protein_coding MGP_CBAJ_T0047224.1 MGP_CBAJ_G0023386.1 mouse_genomes_project 17 40295581 40322908 + MGP_CBAJ_P0047224 Trim26 protein_coding protein_coding MGP_CBAJ_T0047225.1 MGP_CBAJ_G0023386.1 mouse_genomes_project 17 40295608 40316211 + MGP_CBAJ_P0047225 Trim26 protein_coding protein_coding MGP_CBAJ_T0047226.1 MGP_CBAJ_G0023386.1 mouse_genomes_project 17 40295619 40321153 + MGP_CBAJ_P0047226 Trim26 protein_coding protein_coding MGP_CBAJ_T0047227.1 MGP_CBAJ_G0023386.1 mouse_genomes_project 17 40295619 40322925 + MGP_CBAJ_P0047227 Trim26 protein_coding protein_coding MGP_CBAJ_T0047228.1 MGP_CBAJ_G0023386.1 mouse_genomes_project 17 40316023 40321465 + MGP_CBAJ_P0047228 Trim26 protein_coding protein_coding MGP_CBAJ_T0047229.1 MGP_CBAJ_G0023386.1 mouse_genomes_project 17 40318153 40322926 + Trim26 protein_coding processed_transcript MGP_CBAJ_T0045187.1 MGP_CBAJ_G0022860.1 mouse_genomes_project 17 11481242 11506600 - MGP_CBAJ_P0045187 protein_coding protein_coding MGP_CBAJ_T0045188.1 MGP_CBAJ_G0022860.1 mouse_genomes_project 17 11481245 11506362 - MGP_CBAJ_P0045188 protein_coding protein_coding MGP_CBAJ_T0045189.1 MGP_CBAJ_G0022860.1 mouse_genomes_project 17 11485861 11506517 - MGP_CBAJ_P0045189 protein_coding unknown_likely_coding MGP_CBAJ_T0045190.1 MGP_CBAJ_G0022860.1 mouse_genomes_project 17 11494977 11500445 - MGP_CBAJ_P0045190 protein_coding protein_coding MGP_CBAJ_T0045191.1 MGP_CBAJ_G0022860.1 mouse_genomes_project 17 11495998 11498178 - protein_coding processed_transcript MGP_CBAJ_T0101732.1 MGP_CBAJ_G0039763.1 mouse_genomes_project 17 39620400 39620506 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0048359.1 MGP_CBAJ_G0023799.1 mouse_genomes_project 17 97700741 97719138 - MGP_CBAJ_P0048359 Mcfd2 protein_coding protein_coding MGP_CBAJ_T0048360.1 MGP_CBAJ_G0023799.1 mouse_genomes_project 17 97700743 97719107 - MGP_CBAJ_P0048360 Mcfd2 protein_coding protein_coding MGP_CBAJ_T0048361.1 MGP_CBAJ_G0023799.1 mouse_genomes_project 17 97701871 97719083 - MGP_CBAJ_P0048361 Mcfd2 protein_coding protein_coding MGP_CBAJ_T0048362.1 MGP_CBAJ_G0023799.1 mouse_genomes_project 17 97702053 97719098 - MGP_CBAJ_P0048362 Mcfd2 protein_coding protein_coding MGP_CBAJ_T0048363.1 MGP_CBAJ_G0023799.1 mouse_genomes_project 17 97702841 97719077 - MGP_CBAJ_P0048363 Mcfd2 protein_coding protein_coding MGP_CBAJ_T0048364.1 MGP_CBAJ_G0023799.1 mouse_genomes_project 17 97703314 97719083 - MGP_CBAJ_P0048364 Mcfd2 protein_coding protein_coding MGP_CBAJ_T0048365.1 MGP_CBAJ_G0023799.1 mouse_genomes_project 17 97709612 97719066 - Mcfd2 protein_coding processed_transcript MGP_CBAJ_T0098984.1 MGP_CBAJ_G0037239.1 mouse_genomes_project 17 12330236 12330343 + Gm24867 snRNA snRNA MGP_CBAJ_T0000955.1 MGP_CBAJ_G0000887.1 mouse_genomes_project 17 57466556 57469731 - TEC TEC MGP_CBAJ_T0045400.1 MGP_CBAJ_G0022959.1 mouse_genomes_project 17 24274076 24289817 + MGP_CBAJ_P0045400 Zscan10 protein_coding protein_coding MGP_CBAJ_T0045401.1 MGP_CBAJ_G0022959.1 mouse_genomes_project 17 24274076 24289810 + MGP_CBAJ_P0045401 Zscan10 protein_coding protein_coding MGP_CBAJ_T0045402.1 MGP_CBAJ_G0022959.1 mouse_genomes_project 17 24274076 24289810 + MGP_CBAJ_P0045402 Zscan10 protein_coding protein_coding MGP_CBAJ_T0045403.1 MGP_CBAJ_G0022959.1 mouse_genomes_project 17 24274082 24289620 + MGP_CBAJ_P0045403 Zscan10 protein_coding protein_coding MGP_CBAJ_T0045404.1 MGP_CBAJ_G0022959.1 mouse_genomes_project 17 24274082 24289620 + MGP_CBAJ_P0045404 Zscan10 protein_coding protein_coding MGP_CBAJ_T0045405.1 MGP_CBAJ_G0022959.1 mouse_genomes_project 17 24274161 24288499 + MGP_CBAJ_P0045405 Zscan10 protein_coding protein_coding MGP_CBAJ_T0045406.1 MGP_CBAJ_G0022959.1 mouse_genomes_project 17 24281225 24282915 + Zscan10 protein_coding retained_intron MGP_CBAJ_T0045407.1 MGP_CBAJ_G0022959.1 mouse_genomes_project 17 24281249 24288495 + MGP_CBAJ_P0045407 Zscan10 protein_coding protein_coding MGP_CBAJ_T0045408.1 MGP_CBAJ_G0022959.1 mouse_genomes_project 17 24281258 24288495 + MGP_CBAJ_P0045408 Zscan10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045409.1 MGP_CBAJ_G0022959.1 mouse_genomes_project 17 24281258 24288496 + MGP_CBAJ_P0045409 Zscan10 protein_coding protein_coding MGP_CBAJ_T0045410.1 MGP_CBAJ_G0022959.1 mouse_genomes_project 17 24281259 24288496 + MGP_CBAJ_P0045410 Zscan10 protein_coding protein_coding MGP_CBAJ_T0045411.1 MGP_CBAJ_G0022959.1 mouse_genomes_project 17 24283234 24288495 + Zscan10 protein_coding retained_intron MGP_CBAJ_T0047366.1 MGP_CBAJ_G0023466.1 mouse_genomes_project 17 45142272 45154795 - MGP_CBAJ_P0047366 Cenpq protein_coding protein_coding MGP_CBAJ_T0047367.1 MGP_CBAJ_G0023466.1 mouse_genomes_project 17 45145029 45146808 - Cenpq protein_coding processed_transcript MGP_CBAJ_T0046021.1 MGP_CBAJ_G0023112.1 mouse_genomes_project 17 28309593 28320191 - MGP_CBAJ_P0046021 Bak1 protein_coding unknown_likely_coding MGP_CBAJ_T0046022.1 MGP_CBAJ_G0023112.1 mouse_genomes_project 17 28309596 28320655 - MGP_CBAJ_P0046022 Bak1 protein_coding protein_coding MGP_CBAJ_T0046023.1 MGP_CBAJ_G0023112.1 mouse_genomes_project 17 28310452 28314468 - MGP_CBAJ_P0046023 Bak1 protein_coding protein_coding MGP_CBAJ_T0046024.1 MGP_CBAJ_G0023112.1 mouse_genomes_project 17 28314257 28320233 - Bak1 protein_coding processed_transcript MGP_CBAJ_T0006850.1 MGP_CBAJ_G0005636.1 mouse_genomes_project 17 39632686 39637527 + Gm20546 lincRNA lincRNA MGP_CBAJ_T0017323.1 MGP_CBAJ_G0015094.1 mouse_genomes_project 17 52174752 52386445 + Trerf1 processed_transcript retained_intron MGP_CBAJ_T0017324.1 MGP_CBAJ_G0015094.1 mouse_genomes_project 17 52174819 52422529 + Trerf1 processed_transcript processed_transcript MGP_CBAJ_T0017325.1 MGP_CBAJ_G0015094.1 mouse_genomes_project 17 52174819 52420079 + Trerf1 processed_transcript processed_transcript MGP_CBAJ_T0017326.1 MGP_CBAJ_G0015094.1 mouse_genomes_project 17 52175093 52374720 + Trerf1 processed_transcript retained_intron MGP_CBAJ_T0017327.1 MGP_CBAJ_G0015094.1 mouse_genomes_project 17 52257010 52374720 + Trerf1 processed_transcript retained_intron MGP_CBAJ_T0017328.1 MGP_CBAJ_G0015094.1 mouse_genomes_project 17 52347259 52420084 + Trerf1 processed_transcript processed_transcript MGP_CBAJ_T0046396.1 MGP_CBAJ_G0023198.1 mouse_genomes_project 17 34534359 34543895 - MGP_CBAJ_P0046396 Ephx3 protein_coding protein_coding MGP_CBAJ_T0046397.1 MGP_CBAJ_G0023198.1 mouse_genomes_project 17 34536218 34543981 - MGP_CBAJ_P0046397 Ephx3 protein_coding protein_coding MGP_CBAJ_T0101735.1 MGP_CBAJ_G0039766.1 mouse_genomes_project 17 39952047 39953798 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0048269.1 MGP_CBAJ_G0023756.1 mouse_genomes_project 17 89749319 89751670 + Gemin6 protein_coding processed_transcript MGP_CBAJ_T0048270.1 MGP_CBAJ_G0023756.1 mouse_genomes_project 17 89749319 89753349 + MGP_CBAJ_P0048270 Gemin6 protein_coding protein_coding MGP_CBAJ_T0013056.1 MGP_CBAJ_G0011168.1 mouse_genomes_project 17 28912784 28913130 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0047179.1 MGP_CBAJ_G0023369.1 mouse_genomes_project 17 39258658 39269338 + MGP_CBAJ_P0047179 Gnl1 protein_coding protein_coding MGP_CBAJ_T0047180.1 MGP_CBAJ_G0023369.1 mouse_genomes_project 17 39260292 39261048 + Gnl1 protein_coding retained_intron MGP_CBAJ_T0048336.1 MGP_CBAJ_G0023787.1 mouse_genomes_project 17 95798089 95812151 + MGP_CBAJ_P0048336 Six3 protein_coding protein_coding MGP_CBAJ_T0048337.1 MGP_CBAJ_G0023787.1 mouse_genomes_project 17 95807804 95813120 + MGP_CBAJ_P0048337 Six3 protein_coding protein_coding MGP_CBAJ_T0048338.1 MGP_CBAJ_G0023787.1 mouse_genomes_project 17 95807969 95816249 + MGP_CBAJ_P0048338 Six3 protein_coding protein_coding MGP_CBAJ_T0006852.1 MGP_CBAJ_G0005638.1 mouse_genomes_project 17 41452836 41457428 + lincRNA lincRNA MGP_CBAJ_T0048174.1 MGP_CBAJ_G0023721.1 mouse_genomes_project 17 82674632 82710424 - MGP_CBAJ_P0048174 Srd5a2 protein_coding protein_coding MGP_CBAJ_T0100260.1 MGP_CBAJ_G0038515.1 mouse_genomes_project 17 70471293 70471410 + Gm24730 snoRNA snoRNA MGP_CBAJ_T0100265.1 MGP_CBAJ_G0038520.1 mouse_genomes_project 17 81724790 81724895 + Gm25406 snoRNA snoRNA MGP_CBAJ_T0100271.1 MGP_CBAJ_G0038526.1 mouse_genomes_project 17 102865120 102865250 - Gm24244 snoRNA snoRNA MGP_CBAJ_T0006820.1 MGP_CBAJ_G0005613.1 mouse_genomes_project 17 30107690 30108458 - Gm20109 lincRNA lincRNA MGP_CBAJ_T0097983.1 MGP_CBAJ_G0036256.1 mouse_genomes_project 17 49280656 49280775 - n-R5s27 rRNA rRNA MGP_CBAJ_T0017292.1 MGP_CBAJ_G0015081.1 mouse_genomes_project 17 25036765 25049330 + BC028777 processed_transcript processed_transcript MGP_CBAJ_T0017293.1 MGP_CBAJ_G0015081.1 mouse_genomes_project 17 25040410 25049515 + BC028777 processed_transcript processed_transcript MGP_CBAJ_T0006868.1 MGP_CBAJ_G0005647.1 mouse_genomes_project 17 60378843 60399014 - 1700025K24Rik lincRNA lincRNA MGP_CBAJ_T0101704.1 MGP_CBAJ_G0039735.1 mouse_genomes_project 17 23705106 23705757 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0045071.1 MGP_CBAJ_G0022823.1 mouse_genomes_project 17 5108507 5142722 - MGP_CBAJ_P0045071 protein_coding protein_coding MGP_CBAJ_T0047304.1 MGP_CBAJ_G0023416.1 mouse_genomes_project 17 41054771 41055716 + MGP_CBAJ_P0047304 Olfr109 protein_coding protein_coding MGP_CBAJ_T0047737.1 MGP_CBAJ_G0023570.1 mouse_genomes_project 17 53597042 53602915 + MGP_CBAJ_P0047737 Trem2 protein_coding protein_coding MGP_CBAJ_T0047738.1 MGP_CBAJ_G0023570.1 mouse_genomes_project 17 53597081 53604789 + Trem2 protein_coding retained_intron MGP_CBAJ_T0047739.1 MGP_CBAJ_G0023570.1 mouse_genomes_project 17 53597129 53602915 + MGP_CBAJ_P0047739 Trem2 protein_coding protein_coding MGP_CBAJ_T0047740.1 MGP_CBAJ_G0023570.1 mouse_genomes_project 17 53597130 53601200 + Trem2 protein_coding processed_transcript MGP_CBAJ_T0017301.1 MGP_CBAJ_G0015083.1 mouse_genomes_project 17 26601666 26605833 + 2810468N07Rik processed_transcript processed_transcript MGP_CBAJ_T0048168.1 MGP_CBAJ_G0023717.1 mouse_genomes_project 17 81850081 81963312 - MGP_CBAJ_P0048168 Capn13 protein_coding protein_coding MGP_CBAJ_T0006814.1 MGP_CBAJ_G0005607.1 mouse_genomes_project 17 27086663 27089318 + 1700022N22Rik lincRNA lincRNA MGP_CBAJ_T0048150.1 MGP_CBAJ_G0023710.1 mouse_genomes_project 17 80049401 80064140 + Fam179a protein_coding processed_transcript MGP_CBAJ_T0048151.1 MGP_CBAJ_G0023710.1 mouse_genomes_project 17 80049401 80110616 + MGP_CBAJ_P0048151 Fam179a protein_coding protein_coding MGP_CBAJ_T0048152.1 MGP_CBAJ_G0023710.1 mouse_genomes_project 17 80049405 80068124 + Fam179a protein_coding processed_transcript MGP_CBAJ_T0048153.1 MGP_CBAJ_G0023710.1 mouse_genomes_project 17 80063772 80110616 + MGP_CBAJ_P0048153 Fam179a protein_coding protein_coding MGP_CBAJ_T0048154.1 MGP_CBAJ_G0023710.1 mouse_genomes_project 17 80065660 80110490 + MGP_CBAJ_P0048154 Fam179a protein_coding protein_coding MGP_CBAJ_T0048155.1 MGP_CBAJ_G0023710.1 mouse_genomes_project 17 80094321 80110616 + Fam179a protein_coding retained_intron MGP_CBAJ_T0013117.1 MGP_CBAJ_G0011229.1 mouse_genomes_project 17 81151168 81152109 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0046323.1 MGP_CBAJ_G0023182.1 mouse_genomes_project 17 33393793 33397451 - MGP_CBAJ_P0046323 Tff1 protein_coding protein_coding MGP_CBAJ_T0045370.1 MGP_CBAJ_G0022943.1 mouse_genomes_project 17 22200485 22201277 - MGP_CBAJ_P0045370 Gm9772 protein_coding protein_coding MGP_CBAJ_T0046863.1 MGP_CBAJ_G0023303.1 mouse_genomes_project 17 37877269 37893162 + Slc44a4 protein_coding retained_intron MGP_CBAJ_T0046864.1 MGP_CBAJ_G0023303.1 mouse_genomes_project 17 37877273 37893139 + MGP_CBAJ_P0046864 Slc44a4 protein_coding protein_coding MGP_CBAJ_T0046865.1 MGP_CBAJ_G0023303.1 mouse_genomes_project 17 37880519 37893219 + MGP_CBAJ_P0046865 Slc44a4 protein_coding protein_coding MGP_CBAJ_T0046695.1 MGP_CBAJ_G0023269.1 mouse_genomes_project 17 36966325 36969611 - MGP_CBAJ_P0046695 Gm15821 protein_coding protein_coding MGP_CBAJ_T0046481.1 MGP_CBAJ_G0023227.1 mouse_genomes_project 17 35826712 35828458 - MGP_CBAJ_P0046481 Zfp422 protein_coding protein_coding MGP_CBAJ_T0046164.1 MGP_CBAJ_G0023142.1 mouse_genomes_project 17 30160096 30162615 - MGP_CBAJ_P0046164 Clps protein_coding protein_coding MGP_CBAJ_T0046165.1 MGP_CBAJ_G0023142.1 mouse_genomes_project 17 30160099 30162560 - MGP_CBAJ_P0046165 Clps protein_coding protein_coding MGP_CBAJ_T0047638.1 MGP_CBAJ_G0023548.1 mouse_genomes_project 17 52552911 52566874 - MGP_CBAJ_P0047638 Taf8 protein_coding protein_coding MGP_CBAJ_T0045530.1 MGP_CBAJ_G0022995.1 mouse_genomes_project 17 25051016 25080343 - MGP_CBAJ_P0045530 Ccnf protein_coding protein_coding MGP_CBAJ_T0013130.1 MGP_CBAJ_G0011242.1 mouse_genomes_project 17 102695232 102696459 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0045152.1 MGP_CBAJ_G0022849.1 mouse_genomes_project 17 10834938 10934740 - MGP_CBAJ_P0045152 Slc22a3 protein_coding protein_coding MGP_CBAJ_T0006817.1 MGP_CBAJ_G0005610.1 mouse_genomes_project 17 28528843 28530883 + Gm26724 lincRNA lincRNA MGP_CBAJ_T0045806.1 MGP_CBAJ_G0023062.1 mouse_genomes_project 17 26787898 26803408 + MGP_CBAJ_P0045806 Mslnl protein_coding protein_coding MGP_CBAJ_T0045484.1 MGP_CBAJ_G0022987.1 mouse_genomes_project 17 24843100 24851362 + MGP_CBAJ_P0045484 Prss27 protein_coding protein_coding MGP_CBAJ_T0006840.1 MGP_CBAJ_G0005628.1 mouse_genomes_project 17 37052618 37067519 - Gm20513 lincRNA lincRNA MGP_CBAJ_T0048332.1 MGP_CBAJ_G0023784.1 mouse_genomes_project 17 95142087 95189102 + MGP_CBAJ_P0048332 Slc3a1 protein_coding protein_coding MGP_CBAJ_T0011300.1 MGP_CBAJ_G0009438.1 mouse_genomes_project 17 40496404 40496652 + Gm22388 misc_RNA misc_RNA MGP_CBAJ_T0000956.1 MGP_CBAJ_G0000888.1 mouse_genomes_project 17 57503400 57505305 + TEC TEC MGP_CBAJ_T0006859.1 MGP_CBAJ_G0005644.1 mouse_genomes_project 17 54467911 54469176 - 1700008K24Rik lincRNA lincRNA MGP_CBAJ_T0006860.1 MGP_CBAJ_G0005644.1 mouse_genomes_project 17 54467911 54469163 - 1700008K24Rik lincRNA lincRNA MGP_CBAJ_T0006861.1 MGP_CBAJ_G0005644.1 mouse_genomes_project 17 54467913 54469084 - 1700008K24Rik lincRNA lincRNA MGP_CBAJ_T0006862.1 MGP_CBAJ_G0005644.1 mouse_genomes_project 17 54467913 54469141 - 1700008K24Rik lincRNA lincRNA MGP_CBAJ_T0006863.1 MGP_CBAJ_G0005644.1 mouse_genomes_project 17 54468021 54469183 - 1700008K24Rik lincRNA lincRNA MGP_CBAJ_T0010099.1 MGP_CBAJ_G0008237.1 mouse_genomes_project 17 71736849 71736939 - Gm24194 miRNA miRNA MGP_CBAJ_T0048335.1 MGP_CBAJ_G0023786.1 mouse_genomes_project 17 95215489 95622772 + MGP_CBAJ_P0048335 Camkmt protein_coding protein_coding MGP_CBAJ_T0017346.1 MGP_CBAJ_G0015098.1 mouse_genomes_project 17 101779081 101785030 + 4930480K15Rik processed_transcript processed_transcript MGP_CBAJ_T0046927.1 MGP_CBAJ_G0023318.1 mouse_genomes_project 17 38055277 38058378 - MGP_CBAJ_P0046927 Ly6g6d protein_coding protein_coding MGP_CBAJ_T0046928.1 MGP_CBAJ_G0023318.1 mouse_genomes_project 17 38055311 38061897 - Ly6g6d protein_coding processed_transcript MGP_CBAJ_T0046929.1 MGP_CBAJ_G0023318.1 mouse_genomes_project 17 38055379 38058342 - Ly6g6d protein_coding retained_intron MGP_CBAJ_T0046930.1 MGP_CBAJ_G0023318.1 mouse_genomes_project 17 38057787 38061897 - Ly6g6d protein_coding retained_intron MGP_CBAJ_T0046931.1 MGP_CBAJ_G0023318.1 mouse_genomes_project 17 38058090 38061888 - Ly6g6d protein_coding processed_transcript MGP_CBAJ_T0045732.1 MGP_CBAJ_G0023044.1 mouse_genomes_project 17 26210239 26216765 - MGP_CBAJ_P0045732 Gnptg protein_coding protein_coding MGP_CBAJ_T0045733.1 MGP_CBAJ_G0023044.1 mouse_genomes_project 17 26211225 26216757 - MGP_CBAJ_P0045733 Gnptg protein_coding protein_coding MGP_CBAJ_T0047077.1 MGP_CBAJ_G0023355.1 mouse_genomes_project 17 38903213 38925650 - MGP_CBAJ_P0047077 Ddr1 protein_coding protein_coding MGP_CBAJ_T0047078.1 MGP_CBAJ_G0023355.1 mouse_genomes_project 17 38903213 38932774 - MGP_CBAJ_P0047078 Ddr1 protein_coding protein_coding MGP_CBAJ_T0047079.1 MGP_CBAJ_G0023355.1 mouse_genomes_project 17 38903216 38932216 - MGP_CBAJ_P0047079 Ddr1 protein_coding protein_coding MGP_CBAJ_T0047080.1 MGP_CBAJ_G0023355.1 mouse_genomes_project 17 38903216 38932314 - MGP_CBAJ_P0047080 Ddr1 protein_coding protein_coding MGP_CBAJ_T0047081.1 MGP_CBAJ_G0023355.1 mouse_genomes_project 17 38903216 38927047 - MGP_CBAJ_P0047081 Ddr1 protein_coding protein_coding MGP_CBAJ_T0047082.1 MGP_CBAJ_G0023355.1 mouse_genomes_project 17 38904077 38925592 - MGP_CBAJ_P0047082 Ddr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047083.1 MGP_CBAJ_G0023355.1 mouse_genomes_project 17 38906948 38926967 - MGP_CBAJ_P0047083 Ddr1 protein_coding protein_coding MGP_CBAJ_T0047084.1 MGP_CBAJ_G0023355.1 mouse_genomes_project 17 38911669 38932152 - MGP_CBAJ_P0047084 Ddr1 protein_coding protein_coding MGP_CBAJ_T0047085.1 MGP_CBAJ_G0023355.1 mouse_genomes_project 17 38911697 38932796 - MGP_CBAJ_P0047085 Ddr1 protein_coding protein_coding MGP_CBAJ_T0047086.1 MGP_CBAJ_G0023355.1 mouse_genomes_project 17 38911797 38923010 - MGP_CBAJ_P0047086 Ddr1 protein_coding protein_coding MGP_CBAJ_T0047087.1 MGP_CBAJ_G0023355.1 mouse_genomes_project 17 38915884 38927049 - MGP_CBAJ_P0047087 Ddr1 protein_coding protein_coding MGP_CBAJ_T0047088.1 MGP_CBAJ_G0023355.1 mouse_genomes_project 17 38917747 38927320 - MGP_CBAJ_P0047088 Ddr1 protein_coding protein_coding MGP_CBAJ_T0047874.1 MGP_CBAJ_G0023620.1 mouse_genomes_project 17 62543096 62554426 - MGP_CBAJ_P0047874 Ticam1 protein_coding protein_coding MGP_CBAJ_T0010055.1 MGP_CBAJ_G0008193.1 mouse_genomes_project 17 24810843 24810924 + Gm27700 miRNA miRNA MGP_CBAJ_T0013035.1 MGP_CBAJ_G0011147.1 mouse_genomes_project 17 7438831 7439818 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0048116.1 MGP_CBAJ_G0023702.1 mouse_genomes_project 17 79293533 79413357 + MGP_CBAJ_P0048116 Myom1 protein_coding protein_coding MGP_CBAJ_T0048117.1 MGP_CBAJ_G0023702.1 mouse_genomes_project 17 79293580 79413358 + MGP_CBAJ_P0048117 Myom1 protein_coding protein_coding MGP_CBAJ_T0048118.1 MGP_CBAJ_G0023702.1 mouse_genomes_project 17 79293580 79413358 + MGP_CBAJ_P0048118 Myom1 protein_coding protein_coding MGP_CBAJ_T0045953.1 MGP_CBAJ_G0023095.1 mouse_genomes_project 17 27362015 27401096 - MGP_CBAJ_P0045953 Fam234a protein_coding protein_coding MGP_CBAJ_T0045954.1 MGP_CBAJ_G0023095.1 mouse_genomes_project 17 27362906 27401015 - MGP_CBAJ_P0045954 Fam234a protein_coding protein_coding MGP_CBAJ_T0045955.1 MGP_CBAJ_G0023095.1 mouse_genomes_project 17 27363737 27369917 - MGP_CBAJ_P0045955 Fam234a protein_coding protein_coding MGP_CBAJ_T0045956.1 MGP_CBAJ_G0023095.1 mouse_genomes_project 17 27368889 27370639 - Fam234a protein_coding retained_intron MGP_CBAJ_T0045957.1 MGP_CBAJ_G0023095.1 mouse_genomes_project 17 27371964 27374267 - MGP_CBAJ_P0045957 Fam234a protein_coding protein_coding MGP_CBAJ_T0013112.1 MGP_CBAJ_G0011224.1 mouse_genomes_project 17 68360745 68361787 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101699.1 MGP_CBAJ_G0039730.1 mouse_genomes_project 17 21168340 21168865 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0045469.1 MGP_CBAJ_G0022982.1 mouse_genomes_project 17 24733756 24737830 + MGP_CBAJ_P0045469 Sbp protein_coding protein_coding MGP_CBAJ_T0045470.1 MGP_CBAJ_G0022982.1 mouse_genomes_project 17 24733917 24737834 + MGP_CBAJ_P0045470 Sbp protein_coding protein_coding MGP_CBAJ_T0045471.1 MGP_CBAJ_G0022982.1 mouse_genomes_project 17 24733988 24737830 + MGP_CBAJ_P0045471 Sbp protein_coding protein_coding MGP_CBAJ_T0045472.1 MGP_CBAJ_G0022982.1 mouse_genomes_project 17 24734056 24737839 + MGP_CBAJ_P0045472 Sbp protein_coding protein_coding MGP_CBAJ_T0045473.1 MGP_CBAJ_G0022982.1 mouse_genomes_project 17 24734148 24737826 + MGP_CBAJ_P0045473 Sbp protein_coding protein_coding MGP_CBAJ_T0045474.1 MGP_CBAJ_G0022982.1 mouse_genomes_project 17 24734446 24737834 + MGP_CBAJ_P0045474 Sbp protein_coding protein_coding MGP_CBAJ_T0045475.1 MGP_CBAJ_G0022982.1 mouse_genomes_project 17 24734454 24737830 + MGP_CBAJ_P0045475 Sbp protein_coding protein_coding MGP_CBAJ_T0011305.1 MGP_CBAJ_G0009443.1 mouse_genomes_project 17 68261978 68262274 + Gm23773 misc_RNA misc_RNA MGP_CBAJ_T0100261.1 MGP_CBAJ_G0038516.1 mouse_genomes_project 17 72436092 72436224 - Gm25344 snoRNA snoRNA MGP_CBAJ_T0047721.1 MGP_CBAJ_G0023563.1 mouse_genomes_project 17 53262437 53263706 + MGP_CBAJ_P0047721 1700067P10Rik protein_coding protein_coding MGP_CBAJ_T0100256.1 MGP_CBAJ_G0038511.1 mouse_genomes_project 17 53916173 53916305 + Gm24071 snoRNA snoRNA MGP_CBAJ_T0047946.1 MGP_CBAJ_G0023647.1 mouse_genomes_project 17 63413610 63421370 - MGP_CBAJ_P0047946 Gtf2f1 protein_coding protein_coding MGP_CBAJ_T0047812.1 MGP_CBAJ_G0023590.1 mouse_genomes_project 17 59384308 59450478 + Kat2b protein_coding processed_transcript MGP_CBAJ_T0047813.1 MGP_CBAJ_G0023590.1 mouse_genomes_project 17 59384418 59502652 + MGP_CBAJ_P0047813 Kat2b protein_coding protein_coding MGP_CBAJ_T0047814.1 MGP_CBAJ_G0023590.1 mouse_genomes_project 17 59407510 59468346 + MGP_CBAJ_P0047814 Kat2b protein_coding protein_coding MGP_CBAJ_T0047815.1 MGP_CBAJ_G0023590.1 mouse_genomes_project 17 59474606 59502003 + MGP_CBAJ_P0047815 Kat2b protein_coding protein_coding MGP_CBAJ_T0047816.1 MGP_CBAJ_G0023590.1 mouse_genomes_project 17 59489170 59493582 + Kat2b protein_coding retained_intron MGP_CBAJ_T0047817.1 MGP_CBAJ_G0023590.1 mouse_genomes_project 17 59489243 59493607 + Kat2b protein_coding retained_intron MGP_CBAJ_T0047818.1 MGP_CBAJ_G0023590.1 mouse_genomes_project 17 59489327 59500618 + MGP_CBAJ_P0047818 Kat2b protein_coding nonsense_mediated_decay MGP_CBAJ_T0101742.1 MGP_CBAJ_G0039773.1 mouse_genomes_project 17 40129220 40130346 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047350.1 MGP_CBAJ_G0023454.1 mouse_genomes_project 17 44298911 44300503 - MGP_CBAJ_P0047350 Pgk2 protein_coding protein_coding MGP_CBAJ_T0006819.1 MGP_CBAJ_G0005612.1 mouse_genomes_project 17 29165634 29171774 + Gm15458 lincRNA lincRNA MGP_CBAJ_T0047988.1 MGP_CBAJ_G0023667.1 mouse_genomes_project 17 65652642 65668275 - MGP_CBAJ_P0047988 Nudt12 protein_coding protein_coding MGP_CBAJ_T0047989.1 MGP_CBAJ_G0023667.1 mouse_genomes_project 17 65653135 65658610 - Nudt12 protein_coding retained_intron MGP_CBAJ_T0047990.1 MGP_CBAJ_G0023667.1 mouse_genomes_project 17 65661297 65668171 - MGP_CBAJ_P0047990 Nudt12 protein_coding protein_coding MGP_CBAJ_T0045382.1 MGP_CBAJ_G0022949.1 mouse_genomes_project 17 23145341 23145512 + MGP_CBAJ_P0045382 Gm9805 protein_coding protein_coding MGP_CBAJ_T0101726.1 MGP_CBAJ_G0039757.1 mouse_genomes_project 17 39498397 39506044 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0048303.1 MGP_CBAJ_G0023774.1 mouse_genomes_project 17 93633842 93740942 + MGP_CBAJ_P0048303 Mta3 protein_coding protein_coding MGP_CBAJ_T0048304.1 MGP_CBAJ_G0023774.1 mouse_genomes_project 17 93633842 93728398 + MGP_CBAJ_P0048304 Mta3 protein_coding protein_coding MGP_CBAJ_T0048305.1 MGP_CBAJ_G0023774.1 mouse_genomes_project 17 93633842 93728396 + MGP_CBAJ_P0048305 Mta3 protein_coding protein_coding MGP_CBAJ_T0048306.1 MGP_CBAJ_G0023774.1 mouse_genomes_project 17 93633863 93757060 + MGP_CBAJ_P0048306 Mta3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048307.1 MGP_CBAJ_G0023774.1 mouse_genomes_project 17 93633870 93750451 + MGP_CBAJ_P0048307 Mta3 protein_coding protein_coding MGP_CBAJ_T0048308.1 MGP_CBAJ_G0023774.1 mouse_genomes_project 17 93633937 93759080 + MGP_CBAJ_P0048308 Mta3 protein_coding unknown_likely_coding MGP_CBAJ_T0048309.1 MGP_CBAJ_G0023774.1 mouse_genomes_project 17 93662862 93687627 + Mta3 protein_coding processed_transcript MGP_CBAJ_T0048310.1 MGP_CBAJ_G0023774.1 mouse_genomes_project 17 93689392 93735763 + MGP_CBAJ_P0048310 Mta3 protein_coding protein_coding MGP_CBAJ_T0048311.1 MGP_CBAJ_G0023774.1 mouse_genomes_project 17 93719863 93755760 + MGP_CBAJ_P0048311 Mta3 protein_coding protein_coding MGP_CBAJ_T0048312.1 MGP_CBAJ_G0023774.1 mouse_genomes_project 17 93730945 93740116 + Mta3 protein_coding processed_transcript MGP_CBAJ_T0045928.1 MGP_CBAJ_G0023091.1 mouse_genomes_project 17 27275083 27342697 + MGP_CBAJ_P0045928 Axin1 protein_coding protein_coding MGP_CBAJ_T0045929.1 MGP_CBAJ_G0023091.1 mouse_genomes_project 17 27275223 27342127 + MGP_CBAJ_P0045929 Axin1 protein_coding protein_coding MGP_CBAJ_T0045930.1 MGP_CBAJ_G0023091.1 mouse_genomes_project 17 27275345 27342180 + MGP_CBAJ_P0045930 Axin1 protein_coding protein_coding MGP_CBAJ_T0045931.1 MGP_CBAJ_G0023091.1 mouse_genomes_project 17 27279747 27331223 + MGP_CBAJ_P0045931 Axin1 protein_coding protein_coding MGP_CBAJ_T0045932.1 MGP_CBAJ_G0023091.1 mouse_genomes_project 17 27335044 27335687 + Axin1 protein_coding retained_intron MGP_CBAJ_T0101717.1 MGP_CBAJ_G0039748.1 mouse_genomes_project 17 37686417 37697421 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010101.1 MGP_CBAJ_G0008239.1 mouse_genomes_project 17 73003651 73005966 + miRNA miRNA MGP_CBAJ_T0013067.1 MGP_CBAJ_G0011179.1 mouse_genomes_project 17 39499840 39500387 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0045827.1 MGP_CBAJ_G0023070.1 mouse_genomes_project 17 26885696 26890800 + MGP_CBAJ_P0045827 Wdr24 protein_coding protein_coding MGP_CBAJ_T0045828.1 MGP_CBAJ_G0023070.1 mouse_genomes_project 17 26885718 26890791 + Wdr24 protein_coding retained_intron MGP_CBAJ_T0045829.1 MGP_CBAJ_G0023070.1 mouse_genomes_project 17 26886599 26887741 + Wdr24 protein_coding processed_transcript MGP_CBAJ_T0045830.1 MGP_CBAJ_G0023070.1 mouse_genomes_project 17 26886731 26888414 + Wdr24 protein_coding retained_intron MGP_CBAJ_T0045373.1 MGP_CBAJ_G0022946.1 mouse_genomes_project 17 22663333 22691108 - MGP_CBAJ_P0045373 Zfp944 protein_coding protein_coding MGP_CBAJ_T0101686.1 MGP_CBAJ_G0039717.1 mouse_genomes_project 17 19082384 19116931 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047545.1 MGP_CBAJ_G0023514.1 mouse_genomes_project 17 51164757 51186118 - MGP_CBAJ_P0047545 Abcc10 protein_coding protein_coding MGP_CBAJ_T0047546.1 MGP_CBAJ_G0023514.1 mouse_genomes_project 17 51164766 51186071 - MGP_CBAJ_P0047546 Abcc10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047547.1 MGP_CBAJ_G0023514.1 mouse_genomes_project 17 51164769 51186074 - MGP_CBAJ_P0047547 Abcc10 protein_coding protein_coding MGP_CBAJ_T0047548.1 MGP_CBAJ_G0023514.1 mouse_genomes_project 17 51164957 51183879 - MGP_CBAJ_P0047548 Abcc10 protein_coding protein_coding MGP_CBAJ_T0047549.1 MGP_CBAJ_G0023514.1 mouse_genomes_project 17 51174739 51181745 - MGP_CBAJ_P0047549 Abcc10 protein_coding protein_coding MGP_CBAJ_T0047550.1 MGP_CBAJ_G0023514.1 mouse_genomes_project 17 51180970 51186092 - Abcc10 protein_coding retained_intron MGP_CBAJ_T0047551.1 MGP_CBAJ_G0023514.1 mouse_genomes_project 17 51182669 51186447 - Abcc10 protein_coding processed_transcript MGP_CBAJ_T0046623.1 MGP_CBAJ_G0023256.1 mouse_genomes_project 17 36694844 36695911 - H2-Ke6 protein_coding retained_intron MGP_CBAJ_T0046624.1 MGP_CBAJ_G0023256.1 mouse_genomes_project 17 36694844 36695568 - H2-Ke6 protein_coding retained_intron MGP_CBAJ_T0046625.1 MGP_CBAJ_G0023256.1 mouse_genomes_project 17 36694844 36696873 - MGP_CBAJ_P0046625 H2-Ke6 protein_coding protein_coding MGP_CBAJ_T0046626.1 MGP_CBAJ_G0023256.1 mouse_genomes_project 17 36694847 36696863 - H2-Ke6 protein_coding retained_intron MGP_CBAJ_T0046627.1 MGP_CBAJ_G0023256.1 mouse_genomes_project 17 36694968 36695765 - H2-Ke6 protein_coding retained_intron MGP_CBAJ_T0046628.1 MGP_CBAJ_G0023256.1 mouse_genomes_project 17 36695219 36696680 - H2-Ke6 protein_coding processed_transcript MGP_CBAJ_T0046629.1 MGP_CBAJ_G0023256.1 mouse_genomes_project 17 36695480 36696877 - MGP_CBAJ_P0046629 H2-Ke6 protein_coding protein_coding MGP_CBAJ_T0046630.1 MGP_CBAJ_G0023256.1 mouse_genomes_project 17 36695726 36696855 - H2-Ke6 protein_coding retained_intron MGP_CBAJ_T0047964.1 MGP_CBAJ_G0023655.1 mouse_genomes_project 17 63538827 63541223 + MGP_CBAJ_P0047964 Tnfsf9 protein_coding protein_coding MGP_CBAJ_T0045314.1 MGP_CBAJ_G0022908.1 mouse_genomes_project 17 20252266 20275576 - MGP_CBAJ_P0045314 Vmn2r106 protein_coding protein_coding MGP_CBAJ_T0048026.1 MGP_CBAJ_G0023680.1 mouse_genomes_project 17 73389768 73430412 - MGP_CBAJ_P0048026 Ralbp1 protein_coding protein_coding MGP_CBAJ_T0048027.1 MGP_CBAJ_G0023680.1 mouse_genomes_project 17 73389768 73429580 - MGP_CBAJ_P0048027 Ralbp1 protein_coding protein_coding MGP_CBAJ_T0047396.1 MGP_CBAJ_G0023480.1 mouse_genomes_project 17 48162072 48189871 - MGP_CBAJ_P0047396 Slc25a27 protein_coding protein_coding MGP_CBAJ_T0045531.1 MGP_CBAJ_G0022996.1 mouse_genomes_project 17 25092458 25191426 - MGP_CBAJ_P0045531 Abca17 protein_coding protein_coding MGP_CBAJ_T0045532.1 MGP_CBAJ_G0022996.1 mouse_genomes_project 17 25092478 25187650 - MGP_CBAJ_P0045532 Abca17 protein_coding protein_coding MGP_CBAJ_T0047834.1 MGP_CBAJ_G0023601.1 mouse_genomes_project 17 62090853 62093989 + MGP_CBAJ_P0047834 protein_coding protein_coding MGP_CBAJ_T0045223.1 MGP_CBAJ_G0022871.1 mouse_genomes_project 17 13770165 13786560 - MGP_CBAJ_P0045223 Phf10 protein_coding protein_coding MGP_CBAJ_T0045224.1 MGP_CBAJ_G0022871.1 mouse_genomes_project 17 13770170 13771985 - Phf10 protein_coding retained_intron MGP_CBAJ_T0045225.1 MGP_CBAJ_G0022871.1 mouse_genomes_project 17 13771722 13777863 - Phf10 protein_coding retained_intron MGP_CBAJ_T0045226.1 MGP_CBAJ_G0022871.1 mouse_genomes_project 17 13772894 13786423 - MGP_CBAJ_P0045226 Phf10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045227.1 MGP_CBAJ_G0022871.1 mouse_genomes_project 17 13780867 13784688 - Phf10 protein_coding retained_intron MGP_CBAJ_T0046774.1 MGP_CBAJ_G0023287.1 mouse_genomes_project 17 37545041 37555720 - MGP_CBAJ_P0046774 Ppt2 protein_coding protein_coding MGP_CBAJ_T0046775.1 MGP_CBAJ_G0023287.1 mouse_genomes_project 17 37545042 37555662 - MGP_CBAJ_P0046775 Ppt2 protein_coding protein_coding MGP_CBAJ_T0046776.1 MGP_CBAJ_G0023287.1 mouse_genomes_project 17 37545043 37555433 - MGP_CBAJ_P0046776 Ppt2 protein_coding protein_coding MGP_CBAJ_T0046777.1 MGP_CBAJ_G0023287.1 mouse_genomes_project 17 37545608 37555805 - MGP_CBAJ_P0046777 Ppt2 protein_coding protein_coding MGP_CBAJ_T0046778.1 MGP_CBAJ_G0023287.1 mouse_genomes_project 17 37545608 37556319 - MGP_CBAJ_P0046778 Ppt2 protein_coding protein_coding MGP_CBAJ_T0046779.1 MGP_CBAJ_G0023287.1 mouse_genomes_project 17 37545608 37555765 - MGP_CBAJ_P0046779 Ppt2 protein_coding protein_coding MGP_CBAJ_T0046780.1 MGP_CBAJ_G0023287.1 mouse_genomes_project 17 37545693 37555213 - MGP_CBAJ_P0046780 Ppt2 protein_coding protein_coding MGP_CBAJ_T0046781.1 MGP_CBAJ_G0023287.1 mouse_genomes_project 17 37551243 37556790 - MGP_CBAJ_P0046781 Ppt2 protein_coding protein_coding MGP_CBAJ_T0046782.1 MGP_CBAJ_G0023287.1 mouse_genomes_project 17 37551439 37555711 - MGP_CBAJ_P0046782 Ppt2 protein_coding protein_coding MGP_CBAJ_T0046783.1 MGP_CBAJ_G0023287.1 mouse_genomes_project 17 37554773 37555435 - MGP_CBAJ_P0046783 Ppt2 protein_coding protein_coding MGP_CBAJ_T0100254.1 MGP_CBAJ_G0038509.1 mouse_genomes_project 17 38256027 38256103 + Gm25128 snoRNA snoRNA MGP_CBAJ_T0013111.1 MGP_CBAJ_G0011223.1 mouse_genomes_project 17 62229042 62229304 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100253.1 MGP_CBAJ_G0038508.1 mouse_genomes_project 17 38251529 38251606 + Gm22589 snoRNA snoRNA MGP_CBAJ_T0046066.1 MGP_CBAJ_G0023123.1 mouse_genomes_project 17 29062536 29133696 + MGP_CBAJ_P0046066 Pacsin1 protein_coding protein_coding MGP_CBAJ_T0046067.1 MGP_CBAJ_G0023123.1 mouse_genomes_project 17 29062615 29141711 + MGP_CBAJ_P0046067 Pacsin1 protein_coding protein_coding MGP_CBAJ_T0046068.1 MGP_CBAJ_G0023123.1 mouse_genomes_project 17 29062670 29133712 + MGP_CBAJ_P0046068 Pacsin1 protein_coding protein_coding MGP_CBAJ_T0046069.1 MGP_CBAJ_G0023123.1 mouse_genomes_project 17 29099393 29133696 + MGP_CBAJ_P0046069 Pacsin1 protein_coding protein_coding MGP_CBAJ_T0046070.1 MGP_CBAJ_G0023123.1 mouse_genomes_project 17 29099423 29105007 + Pacsin1 protein_coding processed_transcript MGP_CBAJ_T0045313.1 MGP_CBAJ_G0022907.1 mouse_genomes_project 17 20184290 20214149 - MGP_CBAJ_P0045313 Vmn2r105 protein_coding protein_coding MGP_CBAJ_T0011294.1 MGP_CBAJ_G0009432.1 mouse_genomes_project 17 30013569 30013857 + Gm22146 misc_RNA misc_RNA MGP_CBAJ_T0013037.1 MGP_CBAJ_G0011149.1 mouse_genomes_project 17 9892643 9892937 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0045993.1 MGP_CBAJ_G0023105.1 mouse_genomes_project 17 28027494 28032342 + Bnip1 protein_coding retained_intron MGP_CBAJ_T0045994.1 MGP_CBAJ_G0023105.1 mouse_genomes_project 17 28027503 28032343 + Bnip1 protein_coding retained_intron MGP_CBAJ_T0045995.1 MGP_CBAJ_G0023105.1 mouse_genomes_project 17 28027505 28039461 + MGP_CBAJ_P0045995 Bnip1 protein_coding protein_coding MGP_CBAJ_T0045996.1 MGP_CBAJ_G0023105.1 mouse_genomes_project 17 28027505 28039113 + MGP_CBAJ_P0045996 Bnip1 protein_coding protein_coding MGP_CBAJ_T0045997.1 MGP_CBAJ_G0023105.1 mouse_genomes_project 17 28027533 28039452 + MGP_CBAJ_P0045997 Bnip1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045998.1 MGP_CBAJ_G0023105.1 mouse_genomes_project 17 28027547 28039009 + MGP_CBAJ_P0045998 Bnip1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045999.1 MGP_CBAJ_G0023105.1 mouse_genomes_project 17 28032602 28036940 + Bnip1 protein_coding retained_intron MGP_CBAJ_T0046000.1 MGP_CBAJ_G0023105.1 mouse_genomes_project 17 28037706 28039497 + Bnip1 protein_coding retained_intron MGP_CBAJ_T0047668.1 MGP_CBAJ_G0023553.1 mouse_genomes_project 17 52722731 52786690 + MGP_CBAJ_P0047668 Usp49 protein_coding protein_coding MGP_CBAJ_T0047669.1 MGP_CBAJ_G0023553.1 mouse_genomes_project 17 52744412 52772037 + MGP_CBAJ_P0047669 Usp49 protein_coding protein_coding MGP_CBAJ_T0047670.1 MGP_CBAJ_G0023553.1 mouse_genomes_project 17 52772572 52780972 + MGP_CBAJ_P0047670 Usp49 protein_coding protein_coding MGP_CBAJ_T0047671.1 MGP_CBAJ_G0023553.1 mouse_genomes_project 17 52773153 52780644 + MGP_CBAJ_P0047671 Usp49 protein_coding nonsense_mediated_decay MGP_CBAJ_T0013036.1 MGP_CBAJ_G0011148.1 mouse_genomes_project 17 9180111 9180331 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006839.1 MGP_CBAJ_G0005627.1 mouse_genomes_project 17 36998613 36999815 + Gm20506 lincRNA lincRNA MGP_CBAJ_T0045911.1 MGP_CBAJ_G0023086.1 mouse_genomes_project 17 27089884 27124598 - MGP_CBAJ_P0045911 Rab11fip3 protein_coding protein_coding MGP_CBAJ_T0045912.1 MGP_CBAJ_G0023086.1 mouse_genomes_project 17 27089884 27189524 - MGP_CBAJ_P0045912 Rab11fip3 protein_coding protein_coding MGP_CBAJ_T0045913.1 MGP_CBAJ_G0023086.1 mouse_genomes_project 17 27089893 27189756 - MGP_CBAJ_P0045913 Rab11fip3 protein_coding protein_coding MGP_CBAJ_T0045914.1 MGP_CBAJ_G0023086.1 mouse_genomes_project 17 27103776 27124556 - Rab11fip3 protein_coding retained_intron MGP_CBAJ_T0045915.1 MGP_CBAJ_G0023086.1 mouse_genomes_project 17 27116582 27121198 - MGP_CBAJ_P0045915 Rab11fip3 protein_coding protein_coding MGP_CBAJ_T0045916.1 MGP_CBAJ_G0023086.1 mouse_genomes_project 17 27143419 27189582 - Rab11fip3 protein_coding processed_transcript MGP_CBAJ_T0046647.1 MGP_CBAJ_G0023259.1 mouse_genomes_project 17 36708415 36737277 + MGP_CBAJ_P0046647 Col11a2 protein_coding protein_coding MGP_CBAJ_T0046648.1 MGP_CBAJ_G0023259.1 mouse_genomes_project 17 36708415 36736834 + MGP_CBAJ_P0046648 Col11a2 protein_coding protein_coding MGP_CBAJ_T0046649.1 MGP_CBAJ_G0023259.1 mouse_genomes_project 17 36708415 36736834 + MGP_CBAJ_P0046649 Col11a2 protein_coding protein_coding MGP_CBAJ_T0046650.1 MGP_CBAJ_G0023259.1 mouse_genomes_project 17 36708415 36723036 + MGP_CBAJ_P0046650 Col11a2 protein_coding protein_coding MGP_CBAJ_T0046651.1 MGP_CBAJ_G0023259.1 mouse_genomes_project 17 36717263 36730543 + MGP_CBAJ_P0046651 Col11a2 protein_coding protein_coding MGP_CBAJ_T0046652.1 MGP_CBAJ_G0023259.1 mouse_genomes_project 17 36722825 36724852 + Col11a2 protein_coding processed_transcript MGP_CBAJ_T0046653.1 MGP_CBAJ_G0023259.1 mouse_genomes_project 17 36725603 36726974 + Col11a2 protein_coding retained_intron MGP_CBAJ_T0046654.1 MGP_CBAJ_G0023259.1 mouse_genomes_project 17 36733009 36735384 + Col11a2 protein_coding retained_intron MGP_CBAJ_T0047344.1 MGP_CBAJ_G0023448.1 mouse_genomes_project 17 42799109 42800942 + MGP_CBAJ_P0047344 Esp24 protein_coding protein_coding MGP_CBAJ_T0010102.1 MGP_CBAJ_G0008240.1 mouse_genomes_project 17 74739497 74739586 - Mir5709 miRNA miRNA MGP_CBAJ_T0003681.1 MGP_CBAJ_G0003312.1 mouse_genomes_project 17 38510228 38514012 - antisense antisense MGP_CBAJ_T0045292.1 MGP_CBAJ_G0022889.1 mouse_genomes_project 17 17253291 17260043 + protein_coding processed_transcript MGP_CBAJ_T0045294.1 MGP_CBAJ_G0022889.1 mouse_genomes_project 17 17253360 17259941 + MGP_CBAJ_P0045294 protein_coding protein_coding MGP_CBAJ_T0045301.1 MGP_CBAJ_G0022896.1 mouse_genomes_project 17 18608100 18850058 + MGP_CBAJ_P0045301 protein_coding protein_coding MGP_CBAJ_T0045302.1 MGP_CBAJ_G0022896.1 mouse_genomes_project 17 18608697 18850055 + MGP_CBAJ_P0045302 protein_coding protein_coding MGP_CBAJ_T0013033.1 MGP_CBAJ_G0011145.1 mouse_genomes_project 17 6553764 6558367 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013049.1 MGP_CBAJ_G0011161.1 mouse_genomes_project 17 23699342 23699679 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0101716.1 MGP_CBAJ_G0039747.1 mouse_genomes_project 17 37432016 37447417 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0045324.1 MGP_CBAJ_G0022918.1 mouse_genomes_project 17 20879615 20880566 + MGP_CBAJ_P0045324 Vmn1r230 protein_coding protein_coding MGP_CBAJ_T0048013.1 MGP_CBAJ_G0023679.1 mouse_genomes_project 17 73312324 73340295 + MGP_CBAJ_P0048013 Ppp4r1 protein_coding protein_coding MGP_CBAJ_T0048014.1 MGP_CBAJ_G0023679.1 mouse_genomes_project 17 73312531 73349789 + MGP_CBAJ_P0048014 Ppp4r1 protein_coding protein_coding MGP_CBAJ_T0048015.1 MGP_CBAJ_G0023679.1 mouse_genomes_project 17 73315564 73383626 + MGP_CBAJ_P0048015 Ppp4r1 protein_coding protein_coding MGP_CBAJ_T0048016.1 MGP_CBAJ_G0023679.1 mouse_genomes_project 17 73315564 73350015 + MGP_CBAJ_P0048016 Ppp4r1 protein_coding protein_coding MGP_CBAJ_T0048017.1 MGP_CBAJ_G0023679.1 mouse_genomes_project 17 73315564 73383630 + MGP_CBAJ_P0048017 Ppp4r1 protein_coding protein_coding MGP_CBAJ_T0048018.1 MGP_CBAJ_G0023679.1 mouse_genomes_project 17 73315564 73383625 + MGP_CBAJ_P0048018 Ppp4r1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048019.1 MGP_CBAJ_G0023679.1 mouse_genomes_project 17 73336432 73346945 + Ppp4r1 protein_coding processed_transcript MGP_CBAJ_T0048020.1 MGP_CBAJ_G0023679.1 mouse_genomes_project 17 73339127 73346918 + Ppp4r1 protein_coding retained_intron MGP_CBAJ_T0048021.1 MGP_CBAJ_G0023679.1 mouse_genomes_project 17 73353323 73368502 + Ppp4r1 protein_coding processed_transcript MGP_CBAJ_T0048022.1 MGP_CBAJ_G0023679.1 mouse_genomes_project 17 73357316 73383560 + Ppp4r1 protein_coding processed_transcript MGP_CBAJ_T0048023.1 MGP_CBAJ_G0023679.1 mouse_genomes_project 17 73362023 73370606 + MGP_CBAJ_P0048023 Ppp4r1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048024.1 MGP_CBAJ_G0023679.1 mouse_genomes_project 17 73366438 73370542 + Ppp4r1 protein_coding retained_intron MGP_CBAJ_T0048025.1 MGP_CBAJ_G0023679.1 mouse_genomes_project 17 73379593 73380685 + MGP_CBAJ_P0048025 Ppp4r1 protein_coding protein_coding MGP_CBAJ_T0006857.1 MGP_CBAJ_G0005642.1 mouse_genomes_project 17 51360278 51783768 + lincRNA lincRNA MGP_CBAJ_T0048277.1 MGP_CBAJ_G0023760.1 mouse_genomes_project 17 89932356 89932680 - MGP_CBAJ_P0048277 Gm10190 protein_coding protein_coding MGP_CBAJ_T0047381.1 MGP_CBAJ_G0023476.1 mouse_genomes_project 17 47993397 48019791 - MGP_CBAJ_P0047381 protein_coding protein_coding MGP_CBAJ_T0047382.1 MGP_CBAJ_G0023476.1 mouse_genomes_project 17 47993404 48019752 - MGP_CBAJ_P0047382 protein_coding protein_coding MGP_CBAJ_T0047383.1 MGP_CBAJ_G0023476.1 mouse_genomes_project 17 48014834 48017449 - protein_coding processed_transcript MGP_CBAJ_T0047384.1 MGP_CBAJ_G0023476.1 mouse_genomes_project 17 48019222 48019712 - protein_coding retained_intron MGP_CBAJ_T0045046.1 MGP_CBAJ_G0022810.1 mouse_genomes_project 17 3575536 3582167 + MGP_CBAJ_P0045046 Gtf2h5 protein_coding protein_coding MGP_CBAJ_T0045047.1 MGP_CBAJ_G0022810.1 mouse_genomes_project 17 3575587 3578089 + Gtf2h5 protein_coding retained_intron MGP_CBAJ_T0045048.1 MGP_CBAJ_G0022810.1 mouse_genomes_project 17 3575680 3580780 + MGP_CBAJ_P0045048 Gtf2h5 protein_coding protein_coding MGP_CBAJ_T0101743.1 MGP_CBAJ_G0039774.1 mouse_genomes_project 17 40139423 40139471 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047401.1 MGP_CBAJ_G0023483.1 mouse_genomes_project 17 48653169 48660884 + MGP_CBAJ_P0047401 Enpp5 protein_coding protein_coding MGP_CBAJ_T0047402.1 MGP_CBAJ_G0023483.1 mouse_genomes_project 17 48653201 48660875 + MGP_CBAJ_P0047402 Enpp5 protein_coding protein_coding MGP_CBAJ_T0047403.1 MGP_CBAJ_G0023483.1 mouse_genomes_project 17 48653235 48660884 + MGP_CBAJ_P0047403 Enpp5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0101727.1 MGP_CBAJ_G0039758.1 mouse_genomes_project 17 39550595 39550803 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0046324.1 MGP_CBAJ_G0023183.1 mouse_genomes_project 17 33411692 33430172 - MGP_CBAJ_P0046324 Tmprss3 protein_coding protein_coding MGP_CBAJ_T0046325.1 MGP_CBAJ_G0023183.1 mouse_genomes_project 17 33411692 33431398 - MGP_CBAJ_P0046325 Tmprss3 protein_coding protein_coding MGP_CBAJ_T0006886.1 MGP_CBAJ_G0005660.1 mouse_genomes_project 17 93790478 93795945 - lincRNA lincRNA MGP_CBAJ_T0047985.1 MGP_CBAJ_G0023666.1 mouse_genomes_project 17 65522471 65530339 - Pdzph1 protein_coding retained_intron MGP_CBAJ_T0047986.1 MGP_CBAJ_G0023666.1 mouse_genomes_project 17 65522471 65644400 - MGP_CBAJ_P0047986 Pdzph1 protein_coding protein_coding MGP_CBAJ_T0047987.1 MGP_CBAJ_G0023666.1 mouse_genomes_project 17 65522633 65539701 - MGP_CBAJ_P0047987 Pdzph1 protein_coding protein_coding MGP_CBAJ_T0006800.1 MGP_CBAJ_G0005595.1 mouse_genomes_project 17 13933787 13942935 + Gm28873 lincRNA lincRNA MGP_CBAJ_T0046434.1 MGP_CBAJ_G0023205.1 mouse_genomes_project 17 34866281 34892484 + MGP_CBAJ_P0046434 Cyp4f39 protein_coding protein_coding MGP_CBAJ_T0045089.1 MGP_CBAJ_G0022833.1 mouse_genomes_project 17 6175773 6203133 + MGP_CBAJ_P0045089 Ccr6 protein_coding protein_coding MGP_CBAJ_T0045090.1 MGP_CBAJ_G0022833.1 mouse_genomes_project 17 6182180 6203133 + MGP_CBAJ_P0045090 Ccr6 protein_coding protein_coding MGP_CBAJ_T0045091.1 MGP_CBAJ_G0022833.1 mouse_genomes_project 17 6183462 6203133 + MGP_CBAJ_P0045091 Ccr6 protein_coding protein_coding MGP_CBAJ_T0045092.1 MGP_CBAJ_G0022833.1 mouse_genomes_project 17 6183462 6203133 + MGP_CBAJ_P0045092 Ccr6 protein_coding protein_coding MGP_CBAJ_T0045093.1 MGP_CBAJ_G0022833.1 mouse_genomes_project 17 6183462 6203133 + MGP_CBAJ_P0045093 Ccr6 protein_coding protein_coding MGP_CBAJ_T0045094.1 MGP_CBAJ_G0022833.1 mouse_genomes_project 17 6183462 6203133 + MGP_CBAJ_P0045094 Ccr6 protein_coding protein_coding MGP_CBAJ_T0048389.1 MGP_CBAJ_G0023805.1 mouse_genomes_project 17 98314765 98369231 - MGP_CBAJ_P0048389 Kcnk12 protein_coding protein_coding MGP_CBAJ_T0046788.1 MGP_CBAJ_G0023290.1 mouse_genomes_project 17 37575430 37583372 + MGP_CBAJ_P0046788 Atf6b protein_coding protein_coding MGP_CBAJ_T0046789.1 MGP_CBAJ_G0023290.1 mouse_genomes_project 17 37575485 37577434 + MGP_CBAJ_P0046789 Atf6b protein_coding nonsense_mediated_decay MGP_CBAJ_T0046790.1 MGP_CBAJ_G0023290.1 mouse_genomes_project 17 37575485 37577489 + MGP_CBAJ_P0046790 Atf6b protein_coding nonsense_mediated_decay MGP_CBAJ_T0046791.1 MGP_CBAJ_G0023290.1 mouse_genomes_project 17 37575495 37583177 + MGP_CBAJ_P0046791 Atf6b protein_coding protein_coding MGP_CBAJ_T0046792.1 MGP_CBAJ_G0023290.1 mouse_genomes_project 17 37579919 37580400 + Atf6b protein_coding retained_intron MGP_CBAJ_T0046081.1 MGP_CBAJ_G0023127.1 mouse_genomes_project 17 29318051 29363757 + MGP_CBAJ_P0046081 Uhrf1bp1 protein_coding protein_coding MGP_CBAJ_T0046082.1 MGP_CBAJ_G0023127.1 mouse_genomes_project 17 29318804 29343529 + Uhrf1bp1 protein_coding processed_transcript MGP_CBAJ_T0046083.1 MGP_CBAJ_G0023127.1 mouse_genomes_project 17 29353704 29358951 + Uhrf1bp1 protein_coding processed_transcript MGP_CBAJ_T0047757.1 MGP_CBAJ_G0023574.1 mouse_genomes_project 17 53681988 53698547 - MGP_CBAJ_P0047757 Apobec2 protein_coding protein_coding MGP_CBAJ_T0045618.1 MGP_CBAJ_G0023019.1 mouse_genomes_project 17 25635963 25642463 + MGP_CBAJ_P0045618 Rps2 protein_coding protein_coding MGP_CBAJ_T0045619.1 MGP_CBAJ_G0023019.1 mouse_genomes_project 17 25642057 25642459 + Rps2 protein_coding retained_intron MGP_CBAJ_T0047997.1 MGP_CBAJ_G0023670.1 mouse_genomes_project 17 71224961 71225453 - MGP_CBAJ_P0047997 A930002H24Rik protein_coding protein_coding MGP_CBAJ_T0013095.1 MGP_CBAJ_G0011207.1 mouse_genomes_project 17 53095608 53095965 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0045541.1 MGP_CBAJ_G0022998.1 mouse_genomes_project 17 25268893 25283131 + MGP_CBAJ_P0045541 Rnps1 protein_coding protein_coding MGP_CBAJ_T0045542.1 MGP_CBAJ_G0022998.1 mouse_genomes_project 17 25268893 25283131 + MGP_CBAJ_P0045542 Rnps1 protein_coding protein_coding MGP_CBAJ_T0045543.1 MGP_CBAJ_G0022998.1 mouse_genomes_project 17 25268893 25283131 + MGP_CBAJ_P0045543 Rnps1 protein_coding protein_coding MGP_CBAJ_T0045544.1 MGP_CBAJ_G0022998.1 mouse_genomes_project 17 25269195 25279229 + MGP_CBAJ_P0045544 Rnps1 protein_coding unknown_likely_coding MGP_CBAJ_T0101728.1 MGP_CBAJ_G0039759.1 mouse_genomes_project 17 39566707 39567638 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0011315.1 MGP_CBAJ_G0009453.1 mouse_genomes_project 17 95802536 95802735 + Gm27502 misc_RNA misc_RNA MGP_CBAJ_T0046483.1 MGP_CBAJ_G0023229.1 mouse_genomes_project 17 35884603 35917243 - Zfp101 protein_coding processed_transcript MGP_CBAJ_T0046484.1 MGP_CBAJ_G0023229.1 mouse_genomes_project 17 35900833 35917506 - MGP_CBAJ_P0046484 Zfp101 protein_coding protein_coding MGP_CBAJ_T0046485.1 MGP_CBAJ_G0023229.1 mouse_genomes_project 17 35902933 35917222 - MGP_CBAJ_P0046485 Zfp101 protein_coding protein_coding MGP_CBAJ_T0046486.1 MGP_CBAJ_G0023229.1 mouse_genomes_project 17 35903643 35917488 - MGP_CBAJ_P0046486 Zfp101 protein_coding protein_coding MGP_CBAJ_T0046487.1 MGP_CBAJ_G0023229.1 mouse_genomes_project 17 35906579 35917470 - Zfp101 protein_coding processed_transcript MGP_CBAJ_T0047065.1 MGP_CBAJ_G0023354.1 mouse_genomes_project 17 38888630 38894647 - MGP_CBAJ_P0047065 Gtf2h4 protein_coding protein_coding MGP_CBAJ_T0047066.1 MGP_CBAJ_G0023354.1 mouse_genomes_project 17 38888638 38889674 - Gtf2h4 protein_coding retained_intron MGP_CBAJ_T0047067.1 MGP_CBAJ_G0023354.1 mouse_genomes_project 17 38888639 38890753 - Gtf2h4 protein_coding retained_intron MGP_CBAJ_T0047068.1 MGP_CBAJ_G0023354.1 mouse_genomes_project 17 38888641 38894526 - MGP_CBAJ_P0047068 Gtf2h4 protein_coding protein_coding MGP_CBAJ_T0047069.1 MGP_CBAJ_G0023354.1 mouse_genomes_project 17 38888742 38894611 - MGP_CBAJ_P0047069 Gtf2h4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047070.1 MGP_CBAJ_G0023354.1 mouse_genomes_project 17 38891286 38894596 - Gtf2h4 protein_coding retained_intron MGP_CBAJ_T0047071.1 MGP_CBAJ_G0023354.1 mouse_genomes_project 17 38891643 38894598 - MGP_CBAJ_P0047071 Gtf2h4 protein_coding protein_coding MGP_CBAJ_T0047072.1 MGP_CBAJ_G0023354.1 mouse_genomes_project 17 38892244 38894425 - MGP_CBAJ_P0047072 Gtf2h4 protein_coding protein_coding MGP_CBAJ_T0047073.1 MGP_CBAJ_G0023354.1 mouse_genomes_project 17 38892663 38894589 - Gtf2h4 protein_coding retained_intron MGP_CBAJ_T0047074.1 MGP_CBAJ_G0023354.1 mouse_genomes_project 17 38892800 38894206 - Gtf2h4 protein_coding retained_intron MGP_CBAJ_T0047075.1 MGP_CBAJ_G0023354.1 mouse_genomes_project 17 38892950 38894467 - Gtf2h4 protein_coding processed_transcript MGP_CBAJ_T0047076.1 MGP_CBAJ_G0023354.1 mouse_genomes_project 17 38892965 38894567 - MGP_CBAJ_P0047076 Gtf2h4 protein_coding protein_coding MGP_CBAJ_T0045922.1 MGP_CBAJ_G0023088.1 mouse_genomes_project 17 27215673 27223508 - MGP_CBAJ_P0045922 Nme4 protein_coding protein_coding MGP_CBAJ_T0045923.1 MGP_CBAJ_G0023088.1 mouse_genomes_project 17 27221414 27223473 - Nme4 protein_coding retained_intron MGP_CBAJ_T0046454.1 MGP_CBAJ_G0023214.1 mouse_genomes_project 17 35423338 35435537 - MGP_CBAJ_P0046454 Cyp4f14 protein_coding protein_coding MGP_CBAJ_T0046455.1 MGP_CBAJ_G0023214.1 mouse_genomes_project 17 35423338 35435282 - MGP_CBAJ_P0046455 Cyp4f14 protein_coding protein_coding MGP_CBAJ_T0046091.1 MGP_CBAJ_G0023130.1 mouse_genomes_project 17 29539591 29554625 - MGP_CBAJ_P0046091 Tcp11 protein_coding protein_coding MGP_CBAJ_T0046092.1 MGP_CBAJ_G0023130.1 mouse_genomes_project 17 29539592 29554680 - MGP_CBAJ_P0046092 Tcp11 protein_coding protein_coding MGP_CBAJ_T0046093.1 MGP_CBAJ_G0023130.1 mouse_genomes_project 17 29539595 29554608 - MGP_CBAJ_P0046093 Tcp11 protein_coding protein_coding MGP_CBAJ_T0046094.1 MGP_CBAJ_G0023130.1 mouse_genomes_project 17 29539641 29541321 - Tcp11 protein_coding processed_transcript MGP_CBAJ_T0046095.1 MGP_CBAJ_G0023130.1 mouse_genomes_project 17 29542487 29554680 - MGP_CBAJ_P0046095 Tcp11 protein_coding protein_coding MGP_CBAJ_T0046096.1 MGP_CBAJ_G0023130.1 mouse_genomes_project 17 29547519 29554642 - MGP_CBAJ_P0046096 Tcp11 protein_coding protein_coding MGP_CBAJ_T0047368.1 MGP_CBAJ_G0023467.1 mouse_genomes_project 17 45154428 45184117 + MGP_CBAJ_P0047368 Mut protein_coding protein_coding MGP_CBAJ_T0047352.1 MGP_CBAJ_G0023456.1 mouse_genomes_project 17 44394334 44440964 - MGP_CBAJ_P0047352 Crisp1 protein_coding protein_coding MGP_CBAJ_T0047349.1 MGP_CBAJ_G0023453.1 mouse_genomes_project 17 44023195 44025285 + MGP_CBAJ_P0047349 Esp38 protein_coding protein_coding MGP_CBAJ_T0046760.1 MGP_CBAJ_G0023285.1 mouse_genomes_project 17 37532620 37540075 + MGP_CBAJ_P0046760 Agpat1 protein_coding protein_coding MGP_CBAJ_T0046761.1 MGP_CBAJ_G0023285.1 mouse_genomes_project 17 37533202 37539774 + MGP_CBAJ_P0046761 Agpat1 protein_coding protein_coding MGP_CBAJ_T0046762.1 MGP_CBAJ_G0023285.1 mouse_genomes_project 17 37534224 37541829 + MGP_CBAJ_P0046762 Agpat1 protein_coding protein_coding MGP_CBAJ_T0046763.1 MGP_CBAJ_G0023285.1 mouse_genomes_project 17 37534224 37540821 + MGP_CBAJ_P0046763 Agpat1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046764.1 MGP_CBAJ_G0023285.1 mouse_genomes_project 17 37534336 37541269 + MGP_CBAJ_P0046764 Agpat1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046765.1 MGP_CBAJ_G0023285.1 mouse_genomes_project 17 37537377 37541828 + MGP_CBAJ_P0046765 Agpat1 protein_coding protein_coding MGP_CBAJ_T0046766.1 MGP_CBAJ_G0023285.1 mouse_genomes_project 17 37537982 37541798 + MGP_CBAJ_P0046766 Agpat1 protein_coding protein_coding MGP_CBAJ_T0046767.1 MGP_CBAJ_G0023285.1 mouse_genomes_project 17 37538637 37539555 + Agpat1 protein_coding retained_intron MGP_CBAJ_T0046228.1 MGP_CBAJ_G0023155.1 mouse_genomes_project 17 30763235 30765449 + MGP_CBAJ_P0046228 protein_coding protein_coding MGP_CBAJ_T0046102.1 MGP_CBAJ_G0023132.1 mouse_genomes_project 17 29673420 29704328 + Zfp523 protein_coding retained_intron MGP_CBAJ_T0046103.1 MGP_CBAJ_G0023132.1 mouse_genomes_project 17 29673552 29704328 + MGP_CBAJ_P0046103 Zfp523 protein_coding protein_coding MGP_CBAJ_T0046104.1 MGP_CBAJ_G0023132.1 mouse_genomes_project 17 29673631 29704326 + MGP_CBAJ_P0046104 Zfp523 protein_coding protein_coding MGP_CBAJ_T0046105.1 MGP_CBAJ_G0023132.1 mouse_genomes_project 17 29686169 29694037 + Zfp523 protein_coding processed_transcript MGP_CBAJ_T0046106.1 MGP_CBAJ_G0023132.1 mouse_genomes_project 17 29694021 29700920 + MGP_CBAJ_P0046106 Zfp523 protein_coding protein_coding MGP_CBAJ_T0046107.1 MGP_CBAJ_G0023132.1 mouse_genomes_project 17 29700732 29703604 + MGP_CBAJ_P0046107 Zfp523 protein_coding protein_coding MGP_CBAJ_T0046108.1 MGP_CBAJ_G0023132.1 mouse_genomes_project 17 29700907 29704328 + MGP_CBAJ_P0046108 Zfp523 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046109.1 MGP_CBAJ_G0023132.1 mouse_genomes_project 17 29702550 29703749 + Zfp523 protein_coding retained_intron MGP_CBAJ_T0046071.1 MGP_CBAJ_G0023124.1 mouse_genomes_project 17 29144955 29159527 - MGP_CBAJ_P0046071 Spdef protein_coding protein_coding MGP_CBAJ_T0046072.1 MGP_CBAJ_G0023124.1 mouse_genomes_project 17 29145050 29159528 - MGP_CBAJ_P0046072 Spdef protein_coding protein_coding MGP_CBAJ_T0046073.1 MGP_CBAJ_G0023124.1 mouse_genomes_project 17 29145052 29159466 - MGP_CBAJ_P0046073 Spdef protein_coding protein_coding MGP_CBAJ_T0046074.1 MGP_CBAJ_G0023124.1 mouse_genomes_project 17 29145108 29148178 - Spdef protein_coding processed_transcript MGP_CBAJ_T0046075.1 MGP_CBAJ_G0023124.1 mouse_genomes_project 17 29150585 29159501 - MGP_CBAJ_P0046075 Spdef protein_coding protein_coding MGP_CBAJ_T0013044.1 MGP_CBAJ_G0011156.1 mouse_genomes_project 17 14507042 14508437 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0045084.1 MGP_CBAJ_G0022831.1 mouse_genomes_project 17 6057397 6082161 - MGP_CBAJ_P0045084 protein_coding protein_coding MGP_CBAJ_T0046156.1 MGP_CBAJ_G0023139.1 mouse_genomes_project 17 29964667 30066408 - MGP_CBAJ_P0046156 Fkbp5 protein_coding protein_coding MGP_CBAJ_T0046157.1 MGP_CBAJ_G0023139.1 mouse_genomes_project 17 29964669 30102895 - MGP_CBAJ_P0046157 Fkbp5 protein_coding protein_coding MGP_CBAJ_T0046158.1 MGP_CBAJ_G0023139.1 mouse_genomes_project 17 29964677 30068252 - MGP_CBAJ_P0046158 Fkbp5 protein_coding protein_coding MGP_CBAJ_T0046159.1 MGP_CBAJ_G0023139.1 mouse_genomes_project 17 29968270 29995328 - Fkbp5 protein_coding processed_transcript MGP_CBAJ_T0046160.1 MGP_CBAJ_G0023139.1 mouse_genomes_project 17 29982662 30008429 - MGP_CBAJ_P0046160 Fkbp5 protein_coding protein_coding MGP_CBAJ_T0046161.1 MGP_CBAJ_G0023139.1 mouse_genomes_project 17 30077468 30087517 - Fkbp5 protein_coding retained_intron MGP_CBAJ_T0046059.1 MGP_CBAJ_G0023122.1 mouse_genomes_project 17 29034720 29039561 - MGP_CBAJ_P0046059 Rps10 protein_coding protein_coding MGP_CBAJ_T0046060.1 MGP_CBAJ_G0023122.1 mouse_genomes_project 17 29034749 29039597 - MGP_CBAJ_P0046060 Rps10 protein_coding protein_coding MGP_CBAJ_T0046061.1 MGP_CBAJ_G0023122.1 mouse_genomes_project 17 29034751 29041149 - MGP_CBAJ_P0046061 Rps10 protein_coding protein_coding MGP_CBAJ_T0046062.1 MGP_CBAJ_G0023122.1 mouse_genomes_project 17 29035357 29039597 - Rps10 protein_coding processed_transcript MGP_CBAJ_T0046063.1 MGP_CBAJ_G0023122.1 mouse_genomes_project 17 29035986 29038575 - Rps10 protein_coding retained_intron MGP_CBAJ_T0046064.1 MGP_CBAJ_G0023122.1 mouse_genomes_project 17 29036282 29039550 - Rps10 protein_coding retained_intron MGP_CBAJ_T0046065.1 MGP_CBAJ_G0023122.1 mouse_genomes_project 17 29038475 29039565 - Rps10 protein_coding processed_transcript MGP_CBAJ_T0047371.1 MGP_CBAJ_G0023470.1 mouse_genomes_project 17 47058628 47098910 - MGP_CBAJ_P0047371 Adgrf4 protein_coding protein_coding MGP_CBAJ_T0047372.1 MGP_CBAJ_G0023470.1 mouse_genomes_project 17 47058631 47098910 - MGP_CBAJ_P0047372 Adgrf4 protein_coding protein_coding MGP_CBAJ_T0047373.1 MGP_CBAJ_G0023470.1 mouse_genomes_project 17 47058828 47098888 - MGP_CBAJ_P0047373 Adgrf4 protein_coding protein_coding MGP_CBAJ_T0047374.1 MGP_CBAJ_G0023470.1 mouse_genomes_project 17 47077899 47098899 - MGP_CBAJ_P0047374 Adgrf4 protein_coding protein_coding MGP_CBAJ_T0011314.1 MGP_CBAJ_G0009452.1 mouse_genomes_project 17 95801172 95801444 + Gm27275 misc_RNA misc_RNA MGP_CBAJ_T0101722.1 MGP_CBAJ_G0039753.1 mouse_genomes_project 17 39220212 39225262 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0046001.1 MGP_CBAJ_G0023106.1 mouse_genomes_project 17 28093947 28096847 - MGP_CBAJ_P0046001 Nkx2-5 protein_coding protein_coding MGP_CBAJ_T0000965.1 MGP_CBAJ_G0000897.1 mouse_genomes_project 17 99252692 99252873 + TEC TEC MGP_CBAJ_T0048163.1 MGP_CBAJ_G0023716.1 mouse_genomes_project 17 81630825 81694160 + MGP_CBAJ_P0048163 Lclat1 protein_coding protein_coding MGP_CBAJ_T0048164.1 MGP_CBAJ_G0023716.1 mouse_genomes_project 17 81630828 81727653 + MGP_CBAJ_P0048164 Lclat1 protein_coding protein_coding MGP_CBAJ_T0048165.1 MGP_CBAJ_G0023716.1 mouse_genomes_project 17 81630834 81776141 + MGP_CBAJ_P0048165 Lclat1 protein_coding protein_coding MGP_CBAJ_T0048166.1 MGP_CBAJ_G0023716.1 mouse_genomes_project 17 81695157 81772681 + Lclat1 protein_coding processed_transcript MGP_CBAJ_T0048167.1 MGP_CBAJ_G0023716.1 mouse_genomes_project 17 81734997 81773144 + Lclat1 protein_coding processed_transcript MGP_CBAJ_T0046321.1 MGP_CBAJ_G0023180.1 mouse_genomes_project 17 33352128 33356464 - MGP_CBAJ_P0046321 Tff3 protein_coding protein_coding MGP_CBAJ_T0045926.1 MGP_CBAJ_G0023090.1 mouse_genomes_project 17 27260116 27263210 + MGP_CBAJ_P0045926 Mrpl28 protein_coding protein_coding MGP_CBAJ_T0045927.1 MGP_CBAJ_G0023090.1 mouse_genomes_project 17 27260316 27261529 + Mrpl28 protein_coding retained_intron MGP_CBAJ_T0097982.1 MGP_CBAJ_G0036255.1 mouse_genomes_project 17 35313572 35313683 - Gm25555 rRNA rRNA MGP_CBAJ_T0010048.1 MGP_CBAJ_G0008186.1 mouse_genomes_project 17 11350156 11350272 - Gm24085 miRNA miRNA MGP_CBAJ_T0048059.1 MGP_CBAJ_G0023688.1 mouse_genomes_project 17 74216322 74266514 - MGP_CBAJ_P0048059 Themis3 protein_coding protein_coding MGP_CBAJ_T0045735.1 MGP_CBAJ_G0023046.1 mouse_genomes_project 17 26219284 26220661 - Baiap3 protein_coding retained_intron MGP_CBAJ_T0045736.1 MGP_CBAJ_G0023046.1 mouse_genomes_project 17 26219284 26232969 - MGP_CBAJ_P0045736 Baiap3 protein_coding protein_coding MGP_CBAJ_T0045737.1 MGP_CBAJ_G0023046.1 mouse_genomes_project 17 26219982 26230548 - MGP_CBAJ_P0045737 Baiap3 protein_coding protein_coding MGP_CBAJ_T0045738.1 MGP_CBAJ_G0023046.1 mouse_genomes_project 17 26219997 26220939 - MGP_CBAJ_P0045738 Baiap3 protein_coding protein_coding MGP_CBAJ_T0045739.1 MGP_CBAJ_G0023046.1 mouse_genomes_project 17 26220006 26232886 - MGP_CBAJ_P0045739 Baiap3 protein_coding protein_coding MGP_CBAJ_T0045740.1 MGP_CBAJ_G0023046.1 mouse_genomes_project 17 26220149 26232886 - MGP_CBAJ_P0045740 Baiap3 protein_coding protein_coding MGP_CBAJ_T0045741.1 MGP_CBAJ_G0023046.1 mouse_genomes_project 17 26221418 26222409 - Baiap3 protein_coding retained_intron MGP_CBAJ_T0045742.1 MGP_CBAJ_G0023046.1 mouse_genomes_project 17 26222638 26224736 - Baiap3 protein_coding retained_intron MGP_CBAJ_T0045743.1 MGP_CBAJ_G0023046.1 mouse_genomes_project 17 26227621 26232879 - Baiap3 protein_coding retained_intron MGP_CBAJ_T0017308.1 MGP_CBAJ_G0015090.1 mouse_genomes_project 17 37542863 37555634 - Gm20460 processed_transcript processed_transcript MGP_CBAJ_T0046870.1 MGP_CBAJ_G0023306.1 mouse_genomes_project 17 37926842 37929645 - MGP_CBAJ_P0046870 Hspa1b protein_coding protein_coding MGP_CBAJ_T0100247.1 MGP_CBAJ_G0038502.1 mouse_genomes_project 17 25641383 25641517 + Snora64 snoRNA snoRNA MGP_CBAJ_T0006884.1 MGP_CBAJ_G0005658.1 mouse_genomes_project 17 88751225 88754553 + Gm17315 lincRNA lincRNA MGP_CBAJ_T0046322.1 MGP_CBAJ_G0023181.1 mouse_genomes_project 17 33372616 33375854 - MGP_CBAJ_P0046322 Tff2 protein_coding protein_coding MGP_CBAJ_T0101757.1 MGP_CBAJ_G0039788.1 mouse_genomes_project 17 41015039 41016967 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0048109.1 MGP_CBAJ_G0023701.1 mouse_genomes_project 17 79268786 79277599 - MGP_CBAJ_P0048109 Myl12a protein_coding protein_coding MGP_CBAJ_T0048110.1 MGP_CBAJ_G0023701.1 mouse_genomes_project 17 79269426 79277210 - Myl12a protein_coding retained_intron MGP_CBAJ_T0048111.1 MGP_CBAJ_G0023701.1 mouse_genomes_project 17 79269426 79273065 - MGP_CBAJ_P0048111 Myl12a protein_coding protein_coding MGP_CBAJ_T0048112.1 MGP_CBAJ_G0023701.1 mouse_genomes_project 17 79269681 79277923 - MGP_CBAJ_P0048112 Myl12a protein_coding protein_coding MGP_CBAJ_T0048113.1 MGP_CBAJ_G0023701.1 mouse_genomes_project 17 79271264 79277232 - MGP_CBAJ_P0048113 Myl12a protein_coding protein_coding MGP_CBAJ_T0048114.1 MGP_CBAJ_G0023701.1 mouse_genomes_project 17 79271515 79277205 - Myl12a protein_coding retained_intron MGP_CBAJ_T0048115.1 MGP_CBAJ_G0023701.1 mouse_genomes_project 17 79271836 79277062 - MGP_CBAJ_P0048115 Myl12a protein_coding protein_coding MGP_CBAJ_T0010061.1 MGP_CBAJ_G0008199.1 mouse_genomes_project 17 26837160 26837232 + Mir6966 miRNA miRNA MGP_CBAJ_T0046232.1 MGP_CBAJ_G0023157.1 mouse_genomes_project 17 30896378 30909832 + MGP_CBAJ_P0046232 Rab44 protein_coding protein_coding MGP_CBAJ_T0046233.1 MGP_CBAJ_G0023157.1 mouse_genomes_project 17 30897660 30909095 + Rab44 protein_coding processed_transcript MGP_CBAJ_T0045254.1 MGP_CBAJ_G0022879.1 mouse_genomes_project 17 14434416 14442876 - MGP_CBAJ_P0045254 Pdcd2 protein_coding protein_coding MGP_CBAJ_T0045255.1 MGP_CBAJ_G0022879.1 mouse_genomes_project 17 14436788 14442896 - MGP_CBAJ_P0045255 Pdcd2 protein_coding protein_coding MGP_CBAJ_T0045256.1 MGP_CBAJ_G0022879.1 mouse_genomes_project 17 14436806 14437348 - Pdcd2 protein_coding retained_intron MGP_CBAJ_T0045257.1 MGP_CBAJ_G0022879.1 mouse_genomes_project 17 14437907 14442679 - Pdcd2 protein_coding retained_intron MGP_CBAJ_T0045258.1 MGP_CBAJ_G0022879.1 mouse_genomes_project 17 14437995 14442581 - Pdcd2 protein_coding retained_intron MGP_CBAJ_T0046283.1 MGP_CBAJ_G0023170.1 mouse_genomes_project 17 31513027 31568434 + MGP_CBAJ_P0046283 Cmtr1 protein_coding protein_coding MGP_CBAJ_T0046284.1 MGP_CBAJ_G0023170.1 mouse_genomes_project 17 31513239 31528976 + MGP_CBAJ_P0046284 Cmtr1 protein_coding protein_coding MGP_CBAJ_T0046285.1 MGP_CBAJ_G0023170.1 mouse_genomes_project 17 31538453 31552878 + Cmtr1 protein_coding retained_intron MGP_CBAJ_T0046286.1 MGP_CBAJ_G0023170.1 mouse_genomes_project 17 31538835 31541742 + MGP_CBAJ_P0046286 Cmtr1 protein_coding protein_coding MGP_CBAJ_T0046287.1 MGP_CBAJ_G0023170.1 mouse_genomes_project 17 31540020 31552464 + Cmtr1 protein_coding processed_transcript MGP_CBAJ_T0046288.1 MGP_CBAJ_G0023170.1 mouse_genomes_project 17 31540750 31545505 + Cmtr1 protein_coding processed_transcript MGP_CBAJ_T0046289.1 MGP_CBAJ_G0023170.1 mouse_genomes_project 17 31541725 31552568 + Cmtr1 protein_coding retained_intron MGP_CBAJ_T0046290.1 MGP_CBAJ_G0023170.1 mouse_genomes_project 17 31545371 31552550 + Cmtr1 protein_coding retained_intron MGP_CBAJ_T0046291.1 MGP_CBAJ_G0023170.1 mouse_genomes_project 17 31546630 31565814 + Cmtr1 protein_coding retained_intron MGP_CBAJ_T0097985.1 MGP_CBAJ_G0036258.1 mouse_genomes_project 17 52986815 52986934 + n-R5s28 rRNA rRNA MGP_CBAJ_T0046326.1 MGP_CBAJ_G0023184.1 mouse_genomes_project 17 33439991 33473487 + MGP_CBAJ_P0046326 Ubash3a protein_coding protein_coding MGP_CBAJ_T0046327.1 MGP_CBAJ_G0023184.1 mouse_genomes_project 17 33440198 33447893 + MGP_CBAJ_P0046327 Ubash3a protein_coding nonsense_mediated_decay MGP_CBAJ_T0046328.1 MGP_CBAJ_G0023184.1 mouse_genomes_project 17 33440207 33445620 + MGP_CBAJ_P0046328 Ubash3a protein_coding protein_coding MGP_CBAJ_T0046329.1 MGP_CBAJ_G0023184.1 mouse_genomes_project 17 33443885 33473487 + Ubash3a protein_coding processed_transcript MGP_CBAJ_T0046330.1 MGP_CBAJ_G0023184.1 mouse_genomes_project 17 33444069 33449644 + Ubash3a protein_coding processed_transcript MGP_CBAJ_T0047407.1 MGP_CBAJ_G0023486.1 mouse_genomes_project 17 49119082 49389627 - MGP_CBAJ_P0047407 Runx2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047408.1 MGP_CBAJ_G0023486.1 mouse_genomes_project 17 49240670 49390099 - MGP_CBAJ_P0047408 Runx2 protein_coding protein_coding MGP_CBAJ_T0047409.1 MGP_CBAJ_G0023486.1 mouse_genomes_project 17 49240670 49488651 - MGP_CBAJ_P0047409 Runx2 protein_coding protein_coding MGP_CBAJ_T0047410.1 MGP_CBAJ_G0023486.1 mouse_genomes_project 17 49242929 49389161 - MGP_CBAJ_P0047410 Runx2 protein_coding protein_coding MGP_CBAJ_T0047411.1 MGP_CBAJ_G0023486.1 mouse_genomes_project 17 49244200 49488435 - MGP_CBAJ_P0047411 Runx2 protein_coding protein_coding MGP_CBAJ_T0047412.1 MGP_CBAJ_G0023486.1 mouse_genomes_project 17 49244488 49389085 - MGP_CBAJ_P0047412 Runx2 protein_coding protein_coding MGP_CBAJ_T0047413.1 MGP_CBAJ_G0023486.1 mouse_genomes_project 17 49244488 49488080 - MGP_CBAJ_P0047413 Runx2 protein_coding protein_coding MGP_CBAJ_T0047414.1 MGP_CBAJ_G0023486.1 mouse_genomes_project 17 49244574 49488481 - MGP_CBAJ_P0047414 Runx2 protein_coding protein_coding MGP_CBAJ_T0047415.1 MGP_CBAJ_G0023486.1 mouse_genomes_project 17 49244670 49488651 - MGP_CBAJ_P0047415 Runx2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047416.1 MGP_CBAJ_G0023486.1 mouse_genomes_project 17 49244984 49388817 - MGP_CBAJ_P0047416 Runx2 protein_coding protein_coding MGP_CBAJ_T0047417.1 MGP_CBAJ_G0023486.1 mouse_genomes_project 17 49275220 49389085 - MGP_CBAJ_P0047417 Runx2 protein_coding unknown_likely_coding MGP_CBAJ_T0047418.1 MGP_CBAJ_G0023486.1 mouse_genomes_project 17 49279330 49388144 - MGP_CBAJ_P0047418 Runx2 protein_coding protein_coding MGP_CBAJ_T0047419.1 MGP_CBAJ_G0023486.1 mouse_genomes_project 17 49279426 49488118 - MGP_CBAJ_P0047419 Runx2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047424.1 MGP_CBAJ_G0023486.1 mouse_genomes_project 17 49487759 49488481 - Runx2 protein_coding retained_intron MGP_CBAJ_T0048443.1 MGP_CBAJ_G0023815.1 mouse_genomes_project 17 102035961 102036860 + MGP_CBAJ_P0048443 Gm10308 protein_coding protein_coding MGP_CBAJ_T0100250.1 MGP_CBAJ_G0038505.1 mouse_genomes_project 17 37918083 37918149 - Snord52 snoRNA snoRNA MGP_CBAJ_T0101724.1 MGP_CBAJ_G0039755.1 mouse_genomes_project 17 39405522 39577635 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047950.1 MGP_CBAJ_G0023650.1 mouse_genomes_project 17 63454271 63477184 - MGP_CBAJ_P0047950 Slc25a23 protein_coding protein_coding MGP_CBAJ_T0047951.1 MGP_CBAJ_G0023650.1 mouse_genomes_project 17 63455759 63465430 - MGP_CBAJ_P0047951 Slc25a23 protein_coding protein_coding MGP_CBAJ_T0047952.1 MGP_CBAJ_G0023650.1 mouse_genomes_project 17 63456045 63466435 - MGP_CBAJ_P0047952 Slc25a23 protein_coding protein_coding MGP_CBAJ_T0047953.1 MGP_CBAJ_G0023650.1 mouse_genomes_project 17 63457607 63466188 - MGP_CBAJ_P0047953 Slc25a23 protein_coding protein_coding MGP_CBAJ_T0047954.1 MGP_CBAJ_G0023650.1 mouse_genomes_project 17 63457751 63467991 - MGP_CBAJ_P0047954 Slc25a23 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047955.1 MGP_CBAJ_G0023650.1 mouse_genomes_project 17 63468886 63477140 - Slc25a23 protein_coding retained_intron MGP_CBAJ_T0046480.1 MGP_CBAJ_G0023226.1 mouse_genomes_project 17 35823005 35825621 + MGP_CBAJ_P0046480 protein_coding protein_coding MGP_CBAJ_T0045969.1 MGP_CBAJ_G0023098.1 mouse_genomes_project 17 27457974 27458862 - MGP_CBAJ_P0045969 protein_coding protein_coding MGP_CBAJ_T0003684.1 MGP_CBAJ_G0003315.1 mouse_genomes_project 17 38932070 38939428 + antisense antisense MGP_CBAJ_T0045723.1 MGP_CBAJ_G0023041.1 mouse_genomes_project 17 26152513 26155620 + MGP_CBAJ_P0045723 BC003965 protein_coding protein_coding MGP_CBAJ_T0047043.1 MGP_CBAJ_G0023347.1 mouse_genomes_project 17 38710788 38712235 + MGP_CBAJ_P0047043 Psors1c2 protein_coding protein_coding MGP_CBAJ_T0047233.1 MGP_CBAJ_G0023388.1 mouse_genomes_project 17 40333320 40341560 + MGP_CBAJ_P0047233 Trim10 protein_coding protein_coding MGP_CBAJ_T0045213.1 MGP_CBAJ_G0022865.1 mouse_genomes_project 17 12653196 12655124 - MGP_CBAJ_P0045213 Gm10750 protein_coding protein_coding MGP_CBAJ_T0045348.1 MGP_CBAJ_G0022932.1 mouse_genomes_project 17 21664668 21671689 + MGP_CBAJ_P0045348 Zfp52 protein_coding protein_coding MGP_CBAJ_T0045079.1 MGP_CBAJ_G0022827.1 mouse_genomes_project 17 5802436 5805264 + MGP_CBAJ_P0045079 protein_coding protein_coding MGP_CBAJ_T0011306.1 MGP_CBAJ_G0009444.1 mouse_genomes_project 17 75346664 75346941 + Gm22277 misc_RNA misc_RNA MGP_CBAJ_T0010091.1 MGP_CBAJ_G0008229.1 mouse_genomes_project 17 51089465 51089554 + Mir693 miRNA miRNA MGP_CBAJ_T0101682.1 MGP_CBAJ_G0039713.1 mouse_genomes_project 17 18480532 18948538 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0100244.1 MGP_CBAJ_G0038499.1 mouse_genomes_project 17 24829290 24829419 - Gm25092 snoRNA snoRNA MGP_CBAJ_T0101756.1 MGP_CBAJ_G0039787.1 mouse_genomes_project 17 41009618 41010340 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0048218.1 MGP_CBAJ_G0023733.1 mouse_genomes_project 17 87496676 87682757 + MGP_CBAJ_P0048218 Crim1 protein_coding protein_coding MGP_CBAJ_T0101683.1 MGP_CBAJ_G0039714.1 mouse_genomes_project 17 18608100 18849851 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0098999.1 MGP_CBAJ_G0037254.1 mouse_genomes_project 17 50393797 50393878 + Gm25008 snRNA snRNA MGP_CBAJ_T0047298.1 MGP_CBAJ_G0023411.1 mouse_genomes_project 17 40843696 40855284 - MGP_CBAJ_P0047298 Olfr99 protein_coding protein_coding MGP_CBAJ_T0045942.1 MGP_CBAJ_G0023094.1 mouse_genomes_project 17 27349837 27361536 + Rgs11 protein_coding processed_transcript MGP_CBAJ_T0045943.1 MGP_CBAJ_G0023094.1 mouse_genomes_project 17 27349844 27361540 + MGP_CBAJ_P0045943 Rgs11 protein_coding protein_coding MGP_CBAJ_T0045944.1 MGP_CBAJ_G0023094.1 mouse_genomes_project 17 27349848 27361545 + MGP_CBAJ_P0045944 Rgs11 protein_coding protein_coding MGP_CBAJ_T0045945.1 MGP_CBAJ_G0023094.1 mouse_genomes_project 17 27349849 27350719 + Rgs11 protein_coding retained_intron MGP_CBAJ_T0045946.1 MGP_CBAJ_G0023094.1 mouse_genomes_project 17 27349851 27350522 + Rgs11 protein_coding retained_intron MGP_CBAJ_T0045947.1 MGP_CBAJ_G0023094.1 mouse_genomes_project 17 27349862 27361538 + Rgs11 protein_coding retained_intron MGP_CBAJ_T0045948.1 MGP_CBAJ_G0023094.1 mouse_genomes_project 17 27349866 27350861 + Rgs11 protein_coding retained_intron MGP_CBAJ_T0045949.1 MGP_CBAJ_G0023094.1 mouse_genomes_project 17 27349888 27353720 + Rgs11 protein_coding retained_intron MGP_CBAJ_T0045950.1 MGP_CBAJ_G0023094.1 mouse_genomes_project 17 27349898 27350983 + Rgs11 protein_coding retained_intron MGP_CBAJ_T0045951.1 MGP_CBAJ_G0023094.1 mouse_genomes_project 17 27354367 27361538 + Rgs11 protein_coding retained_intron MGP_CBAJ_T0045952.1 MGP_CBAJ_G0023094.1 mouse_genomes_project 17 27354755 27361536 + Rgs11 protein_coding retained_intron MGP_CBAJ_T0000944.1 MGP_CBAJ_G0000877.1 mouse_genomes_project 17 9565424 9570424 + TEC TEC MGP_CBAJ_T0013042.1 MGP_CBAJ_G0011154.1 mouse_genomes_project 17 14486002 14486260 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0046270.1 MGP_CBAJ_G0023166.1 mouse_genomes_project 17 31361441 31386485 - MGP_CBAJ_P0046270 Tmem217 protein_coding protein_coding MGP_CBAJ_T0046271.1 MGP_CBAJ_G0023166.1 mouse_genomes_project 17 31361441 31386485 - MGP_CBAJ_P0046271 Tmem217 protein_coding protein_coding MGP_CBAJ_T0047315.1 MGP_CBAJ_G0023425.1 mouse_genomes_project 17 41298655 41299652 + MGP_CBAJ_P0047315 Olfr121 protein_coding protein_coding MGP_CBAJ_T0013057.1 MGP_CBAJ_G0011169.1 mouse_genomes_project 17 28912784 28913127 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0048291.1 MGP_CBAJ_G0023768.1 mouse_genomes_project 17 91096535 91096696 + MGP_CBAJ_P0048291 Gm11096 protein_coding protein_coding MGP_CBAJ_T0010090.1 MGP_CBAJ_G0008228.1 mouse_genomes_project 17 39236623 39236708 - Mir877 miRNA miRNA MGP_CBAJ_T0046201.1 MGP_CBAJ_G0023151.1 mouse_genomes_project 17 30627042 30635976 - MGP_CBAJ_P0046201 Pxt1 protein_coding protein_coding MGP_CBAJ_T0048333.1 MGP_CBAJ_G0023785.1 mouse_genomes_project 17 95188336 95215031 - MGP_CBAJ_P0048333 Prepl protein_coding protein_coding MGP_CBAJ_T0048334.1 MGP_CBAJ_G0023785.1 mouse_genomes_project 17 95188336 95215031 - MGP_CBAJ_P0048334 Prepl protein_coding protein_coding MGP_CBAJ_T0099013.1 MGP_CBAJ_G0037268.1 mouse_genomes_project 17 89598435 89598541 + Gm23125 snRNA snRNA MGP_CBAJ_T0045786.1 MGP_CBAJ_G0023058.1 mouse_genomes_project 17 26609965 26702908 + MGP_CBAJ_P0045786 Lmf1 protein_coding protein_coding MGP_CBAJ_T0045787.1 MGP_CBAJ_G0023058.1 mouse_genomes_project 17 26609968 26702908 + MGP_CBAJ_P0045787 Lmf1 protein_coding protein_coding MGP_CBAJ_T0045788.1 MGP_CBAJ_G0023058.1 mouse_genomes_project 17 26609978 26629309 + Lmf1 protein_coding retained_intron MGP_CBAJ_T0045789.1 MGP_CBAJ_G0023058.1 mouse_genomes_project 17 26609978 26702805 + MGP_CBAJ_P0045789 Lmf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045790.1 MGP_CBAJ_G0023058.1 mouse_genomes_project 17 26609988 26692633 + MGP_CBAJ_P0045790 Lmf1 protein_coding protein_coding MGP_CBAJ_T0045791.1 MGP_CBAJ_G0023058.1 mouse_genomes_project 17 26609990 26620003 + Lmf1 protein_coding retained_intron MGP_CBAJ_T0045792.1 MGP_CBAJ_G0023058.1 mouse_genomes_project 17 26609990 26670847 + Lmf1 protein_coding retained_intron MGP_CBAJ_T0045793.1 MGP_CBAJ_G0023058.1 mouse_genomes_project 17 26609990 26685759 + Lmf1 protein_coding retained_intron MGP_CBAJ_T0045794.1 MGP_CBAJ_G0023058.1 mouse_genomes_project 17 26610111 26666687 + Lmf1 protein_coding processed_transcript MGP_CBAJ_T0045795.1 MGP_CBAJ_G0023058.1 mouse_genomes_project 17 26693193 26694228 + MGP_CBAJ_P0045795 Lmf1 protein_coding protein_coding MGP_CBAJ_T0013108.1 MGP_CBAJ_G0011220.1 mouse_genomes_project 17 59839830 59840547 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0045808.1 MGP_CBAJ_G0023064.1 mouse_genomes_project 17 26830227 26839685 + MGP_CBAJ_P0045808 Narfl protein_coding protein_coding MGP_CBAJ_T0045809.1 MGP_CBAJ_G0023064.1 mouse_genomes_project 17 26830227 26839144 + MGP_CBAJ_P0045809 Narfl protein_coding protein_coding MGP_CBAJ_T0045810.1 MGP_CBAJ_G0023064.1 mouse_genomes_project 17 26830258 26831677 + Narfl protein_coding retained_intron MGP_CBAJ_T0045811.1 MGP_CBAJ_G0023064.1 mouse_genomes_project 17 26830268 26835866 + MGP_CBAJ_P0045811 Narfl protein_coding nonsense_mediated_decay MGP_CBAJ_T0045812.1 MGP_CBAJ_G0023064.1 mouse_genomes_project 17 26830270 26839149 + Narfl protein_coding retained_intron MGP_CBAJ_T0045813.1 MGP_CBAJ_G0023064.1 mouse_genomes_project 17 26833168 26835946 + Narfl protein_coding retained_intron MGP_CBAJ_T0006838.1 MGP_CBAJ_G0005626.1 mouse_genomes_project 17 36693789 36693894 - Gm26940 lincRNA lincRNA MGP_CBAJ_T0101760.1 MGP_CBAJ_G0039791.1 mouse_genomes_project 17 42003502 42005215 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0045228.1 MGP_CBAJ_G0022872.1 mouse_genomes_project 17 13792680 13819339 - MGP_CBAJ_P0045228 protein_coding protein_coding MGP_CBAJ_T0045229.1 MGP_CBAJ_G0022872.1 mouse_genomes_project 17 13792684 13819317 - MGP_CBAJ_P0045229 protein_coding protein_coding MGP_CBAJ_T0013094.1 MGP_CBAJ_G0011206.1 mouse_genomes_project 17 52042030 52042483 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0046292.1 MGP_CBAJ_G0023171.1 mouse_genomes_project 17 31548955 31579464 - MGP_CBAJ_P0046292 Ccdc167 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046293.1 MGP_CBAJ_G0023171.1 mouse_genomes_project 17 31560029 31579440 - MGP_CBAJ_P0046293 Ccdc167 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046294.1 MGP_CBAJ_G0023171.1 mouse_genomes_project 17 31560775 31579464 - MGP_CBAJ_P0046294 Ccdc167 protein_coding protein_coding MGP_CBAJ_T0046295.1 MGP_CBAJ_G0023171.1 mouse_genomes_project 17 31562453 31579418 - MGP_CBAJ_P0046295 Ccdc167 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046296.1 MGP_CBAJ_G0023171.1 mouse_genomes_project 17 31565786 31579467 - MGP_CBAJ_P0046296 Ccdc167 protein_coding protein_coding MGP_CBAJ_T0046297.1 MGP_CBAJ_G0023171.1 mouse_genomes_project 17 31575427 31579419 - Ccdc167 protein_coding processed_transcript MGP_CBAJ_T0017303.1 MGP_CBAJ_G0015085.1 mouse_genomes_project 17 31386690 31528873 + Gm28052 processed_transcript processed_transcript MGP_CBAJ_T0046936.1 MGP_CBAJ_G0023320.1 mouse_genomes_project 17 38064271 38069537 - MGP_CBAJ_P0046936 Ly6g6f protein_coding protein_coding MGP_CBAJ_T0045059.1 MGP_CBAJ_G0022817.1 mouse_genomes_project 17 4715853 4796935 + MGP_CBAJ_P0045059 protein_coding protein_coding MGP_CBAJ_T0045437.1 MGP_CBAJ_G0022971.1 mouse_genomes_project 17 24468190 24482935 - MGP_CBAJ_P0045437 Flywch1 protein_coding unknown_likely_coding MGP_CBAJ_T0045438.1 MGP_CBAJ_G0022971.1 mouse_genomes_project 17 24475190 24493689 - MGP_CBAJ_P0045438 Flywch1 protein_coding protein_coding MGP_CBAJ_T0045439.1 MGP_CBAJ_G0022971.1 mouse_genomes_project 17 24475199 24483492 - MGP_CBAJ_P0045439 Flywch1 protein_coding protein_coding MGP_CBAJ_T0045135.1 MGP_CBAJ_G0022845.1 mouse_genomes_project 17 9113417 9904222 + Park2 protein_coding retained_intron MGP_CBAJ_T0045136.1 MGP_CBAJ_G0022845.1 mouse_genomes_project 17 9113417 9904222 + Park2 protein_coding retained_intron MGP_CBAJ_T0045137.1 MGP_CBAJ_G0022845.1 mouse_genomes_project 17 9113417 10453556 + MGP_CBAJ_P0045137 Park2 protein_coding protein_coding MGP_CBAJ_T0045138.1 MGP_CBAJ_G0022845.1 mouse_genomes_project 17 9113424 9235189 + Park2 protein_coding processed_transcript MGP_CBAJ_T0045139.1 MGP_CBAJ_G0022845.1 mouse_genomes_project 17 9365887 9840922 + MGP_CBAJ_P0045139 Park2 protein_coding protein_coding MGP_CBAJ_T0045140.1 MGP_CBAJ_G0022845.1 mouse_genomes_project 17 9628686 9966697 + MGP_CBAJ_P0045140 Park2 protein_coding protein_coding MGP_CBAJ_T0045141.1 MGP_CBAJ_G0022845.1 mouse_genomes_project 17 10208931 10241726 + MGP_CBAJ_P0045141 Park2 protein_coding protein_coding MGP_CBAJ_T0045142.1 MGP_CBAJ_G0022845.1 mouse_genomes_project 17 10215529 10241726 + Park2 protein_coding processed_transcript MGP_CBAJ_T0045143.1 MGP_CBAJ_G0022845.1 mouse_genomes_project 17 10416518 10453551 + Park2 protein_coding processed_transcript MGP_CBAJ_T0048215.1 MGP_CBAJ_G0023732.1 mouse_genomes_project 17 84433239 84447892 - MGP_CBAJ_P0048215 Fam98a protein_coding protein_coding MGP_CBAJ_T0048216.1 MGP_CBAJ_G0023732.1 mouse_genomes_project 17 84435184 84436726 - Fam98a protein_coding retained_intron MGP_CBAJ_T0048217.1 MGP_CBAJ_G0023732.1 mouse_genomes_project 17 84440620 84447742 - Fam98a protein_coding retained_intron MGP_CBAJ_T0045764.1 MGP_CBAJ_G0023053.1 mouse_genomes_project 17 26359151 26364310 + MGP_CBAJ_P0045764 Tpsg1 protein_coding protein_coding MGP_CBAJ_T0045765.1 MGP_CBAJ_G0023053.1 mouse_genomes_project 17 26359167 26364019 + MGP_CBAJ_P0045765 Tpsg1 protein_coding protein_coding MGP_CBAJ_T0045766.1 MGP_CBAJ_G0023053.1 mouse_genomes_project 17 26360409 26364310 + MGP_CBAJ_P0045766 Tpsg1 protein_coding protein_coding MGP_CBAJ_T0045767.1 MGP_CBAJ_G0023053.1 mouse_genomes_project 17 26360440 26364312 + MGP_CBAJ_P0045767 Tpsg1 protein_coding protein_coding MGP_CBAJ_T0045768.1 MGP_CBAJ_G0023053.1 mouse_genomes_project 17 26362878 26364255 + MGP_CBAJ_P0045768 Tpsg1 protein_coding protein_coding MGP_CBAJ_T0017302.1 MGP_CBAJ_G0015084.1 mouse_genomes_project 17 27002655 27027592 + Gm16278 processed_transcript processed_transcript MGP_CBAJ_T0046961.1 MGP_CBAJ_G0023327.1 mouse_genomes_project 17 38123458 38126512 - MGP_CBAJ_P0046961 Apom protein_coding protein_coding MGP_CBAJ_T0047335.1 MGP_CBAJ_G0023442.1 mouse_genomes_project 17 41867084 41868023 + MGP_CBAJ_P0047335 Olfr134 protein_coding protein_coding MGP_CBAJ_T0045482.1 MGP_CBAJ_G0022985.1 mouse_genomes_project 17 24794314 24798923 - MGP_CBAJ_P0045482 Prss22 protein_coding protein_coding MGP_CBAJ_T0045651.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25824871 25875587 - MGP_CBAJ_P0045651 Mapk8ip3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045666.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25830234 25875626 - MGP_CBAJ_P0045666 Mapk8ip3 protein_coding protein_coding MGP_CBAJ_T0045667.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25830234 25875626 - MGP_CBAJ_P0045667 Mapk8ip3 protein_coding protein_coding MGP_CBAJ_T0045668.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25830261 25875561 - MGP_CBAJ_P0045668 Mapk8ip3 protein_coding protein_coding MGP_CBAJ_T0045669.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25830261 25875617 - MGP_CBAJ_P0045669 Mapk8ip3 protein_coding protein_coding MGP_CBAJ_T0045670.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25830261 25875616 - MGP_CBAJ_P0045670 Mapk8ip3 protein_coding protein_coding MGP_CBAJ_T0045671.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25830261 25875543 - MGP_CBAJ_P0045671 Mapk8ip3 protein_coding protein_coding MGP_CBAJ_T0045672.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25830262 25875578 - MGP_CBAJ_P0045672 Mapk8ip3 protein_coding protein_coding MGP_CBAJ_T0045673.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25831336 25832446 - Mapk8ip3 protein_coding retained_intron MGP_CBAJ_T0045674.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25831527 25875609 - MGP_CBAJ_P0045674 Mapk8ip3 protein_coding protein_coding MGP_CBAJ_T0045675.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25831676 25875617 - MGP_CBAJ_P0045675 Mapk8ip3 protein_coding protein_coding MGP_CBAJ_T0045676.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25832392 25833815 - Mapk8ip3 protein_coding retained_intron MGP_CBAJ_T0045677.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25833272 25834447 - Mapk8ip3 protein_coding retained_intron MGP_CBAJ_T0045678.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25834546 25835811 - Mapk8ip3 protein_coding retained_intron MGP_CBAJ_T0045679.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25835419 25836094 - Mapk8ip3 protein_coding retained_intron MGP_CBAJ_T0045680.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25840210 25841469 - Mapk8ip3 protein_coding retained_intron MGP_CBAJ_T0045681.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25840861 25842480 - Mapk8ip3 protein_coding retained_intron MGP_CBAJ_T0045682.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25842516 25852335 - Mapk8ip3 protein_coding processed_transcript MGP_CBAJ_T0045683.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25842606 25859616 - MGP_CBAJ_P0045683 Mapk8ip3 protein_coding protein_coding MGP_CBAJ_T0045684.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25851121 25859959 - Mapk8ip3 protein_coding retained_intron MGP_CBAJ_T0045685.1 MGP_CBAJ_G0023031.1 mouse_genomes_project 17 25862846 25875594 - Mapk8ip3 protein_coding retained_intron MGP_CBAJ_T0101759.1 MGP_CBAJ_G0039790.1 mouse_genomes_project 17 41679793 41682543 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047791.1 MGP_CBAJ_G0023584.1 mouse_genomes_project 17 56278435 56590400 - MGP_CBAJ_P0047791 Tbc1d5 protein_coding unknown_likely_coding MGP_CBAJ_T0047792.1 MGP_CBAJ_G0023584.1 mouse_genomes_project 17 56278441 56768070 - MGP_CBAJ_P0047792 Tbc1d5 protein_coding protein_coding MGP_CBAJ_T0047930.1 MGP_CBAJ_G0023636.1 mouse_genomes_project 17 63120779 63126939 - MGP_CBAJ_P0047930 Nrtn protein_coding protein_coding MGP_CBAJ_T0045117.1 MGP_CBAJ_G0022839.1 mouse_genomes_project 17 6508786 6972029 + MGP_CBAJ_P0045117 Pde10a protein_coding protein_coding MGP_CBAJ_T0045118.1 MGP_CBAJ_G0022839.1 mouse_genomes_project 17 6510130 7033446 + MGP_CBAJ_P0045118 Pde10a protein_coding protein_coding MGP_CBAJ_T0045121.1 MGP_CBAJ_G0022839.1 mouse_genomes_project 17 6825837 6936562 + Pde10a protein_coding retained_intron MGP_CBAJ_T0045122.1 MGP_CBAJ_G0022839.1 mouse_genomes_project 17 6825923 7037595 + MGP_CBAJ_P0045122 Pde10a protein_coding nonsense_mediated_decay MGP_CBAJ_T0045123.1 MGP_CBAJ_G0022839.1 mouse_genomes_project 17 6826223 7037603 + MGP_CBAJ_P0045123 Pde10a protein_coding protein_coding MGP_CBAJ_T0045124.1 MGP_CBAJ_G0022839.1 mouse_genomes_project 17 6876130 7033350 + MGP_CBAJ_P0045124 Pde10a protein_coding protein_coding MGP_CBAJ_T0045125.1 MGP_CBAJ_G0022839.1 mouse_genomes_project 17 6930663 6979133 + Pde10a protein_coding processed_transcript MGP_CBAJ_T0045126.1 MGP_CBAJ_G0022839.1 mouse_genomes_project 17 6972745 7035238 + MGP_CBAJ_P0045126 Pde10a protein_coding protein_coding MGP_CBAJ_T0046479.1 MGP_CBAJ_G0023225.1 mouse_genomes_project 17 35798228 35799183 + MGP_CBAJ_P0046479 Olfr63 protein_coding protein_coding MGP_CBAJ_T0045303.1 MGP_CBAJ_G0022897.1 mouse_genomes_project 17 18821398 18850061 + MGP_CBAJ_P0045303 Vmn2r98 protein_coding protein_coding MGP_CBAJ_T0047013.1 MGP_CBAJ_G0023339.1 mouse_genomes_project 17 38271081 38643035 + MGP_CBAJ_P0047013 H2-K1 protein_coding protein_coding MGP_CBAJ_T0097984.1 MGP_CBAJ_G0036257.1 mouse_genomes_project 17 52344150 52344223 + Gm26216 rRNA rRNA MGP_CBAJ_T0006801.1 MGP_CBAJ_G0005596.1 mouse_genomes_project 17 14112208 14121407 - Gm5091 lincRNA lincRNA MGP_CBAJ_T0046673.1 MGP_CBAJ_G0023264.1 mouse_genomes_project 17 36854314 36889433 + MGP_CBAJ_P0046673 protein_coding protein_coding MGP_CBAJ_T0045987.1 MGP_CBAJ_G0023104.1 mouse_genomes_project 17 27951277 28019521 + MGP_CBAJ_P0045987 Crebrf protein_coding protein_coding MGP_CBAJ_T0045988.1 MGP_CBAJ_G0023104.1 mouse_genomes_project 17 27951282 27981869 + MGP_CBAJ_P0045988 Crebrf protein_coding protein_coding MGP_CBAJ_T0045989.1 MGP_CBAJ_G0023104.1 mouse_genomes_project 17 27951337 28002684 + MGP_CBAJ_P0045989 Crebrf protein_coding protein_coding MGP_CBAJ_T0045990.1 MGP_CBAJ_G0023104.1 mouse_genomes_project 17 27951351 28000723 + MGP_CBAJ_P0045990 Crebrf protein_coding protein_coding MGP_CBAJ_T0045991.1 MGP_CBAJ_G0023104.1 mouse_genomes_project 17 27981893 27996612 + Crebrf protein_coding retained_intron MGP_CBAJ_T0045992.1 MGP_CBAJ_G0023104.1 mouse_genomes_project 17 27996126 27998344 + Crebrf protein_coding retained_intron MGP_CBAJ_T0048040.1 MGP_CBAJ_G0023684.1 mouse_genomes_project 17 73701405 73711095 + MGP_CBAJ_P0048040 Wash1 protein_coding protein_coding MGP_CBAJ_T0048041.1 MGP_CBAJ_G0023684.1 mouse_genomes_project 17 73701504 73711095 + MGP_CBAJ_P0048041 Wash1 protein_coding protein_coding MGP_CBAJ_T0046306.1 MGP_CBAJ_G0023173.1 mouse_genomes_project 17 31910261 32144426 + MGP_CBAJ_P0046306 Zfand3 protein_coding protein_coding MGP_CBAJ_T0046307.1 MGP_CBAJ_G0023173.1 mouse_genomes_project 17 31958667 32144436 + MGP_CBAJ_P0046307 Zfand3 protein_coding unknown_likely_coding MGP_CBAJ_T0046308.1 MGP_CBAJ_G0023173.1 mouse_genomes_project 17 31980786 32144387 + MGP_CBAJ_P0046308 Zfand3 protein_coding unknown_likely_coding MGP_CBAJ_T0048383.1 MGP_CBAJ_G0023804.1 mouse_genomes_project 17 98230353 98288619 + MGP_CBAJ_P0048383 Msh2 protein_coding protein_coding MGP_CBAJ_T0048384.1 MGP_CBAJ_G0023804.1 mouse_genomes_project 17 98230563 98237402 + Msh2 protein_coding retained_intron MGP_CBAJ_T0048385.1 MGP_CBAJ_G0023804.1 mouse_genomes_project 17 98230584 98272203 + Msh2 protein_coding retained_intron MGP_CBAJ_T0048386.1 MGP_CBAJ_G0023804.1 mouse_genomes_project 17 98230632 98243172 + MGP_CBAJ_P0048386 Msh2 protein_coding protein_coding MGP_CBAJ_T0048387.1 MGP_CBAJ_G0023804.1 mouse_genomes_project 17 98249754 98259445 + Msh2 protein_coding retained_intron MGP_CBAJ_T0048388.1 MGP_CBAJ_G0023804.1 mouse_genomes_project 17 98259282 98282578 + MGP_CBAJ_P0048388 Msh2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047832.1 MGP_CBAJ_G0023599.1 mouse_genomes_project 17 61922176 62033904 + MGP_CBAJ_P0047832 Adgre4 protein_coding protein_coding MGP_CBAJ_T0003661.1 MGP_CBAJ_G0003300.1 mouse_genomes_project 17 30618259 30629868 + Gm16191 antisense antisense MGP_CBAJ_T0003662.1 MGP_CBAJ_G0003300.1 mouse_genomes_project 17 30627172 30627830 + Gm16191 antisense antisense MGP_CBAJ_T0101753.1 MGP_CBAJ_G0039784.1 mouse_genomes_project 17 40979573 40980500 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0048182.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83310269 83511302 + MGP_CBAJ_P0048182 Birc6 protein_coding protein_coding MGP_CBAJ_T0048183.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83310442 83510335 + MGP_CBAJ_P0048183 Birc6 protein_coding protein_coding MGP_CBAJ_T0048184.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83310442 83510335 + MGP_CBAJ_P0048184 Birc6 protein_coding protein_coding MGP_CBAJ_T0048185.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83310442 83510335 + MGP_CBAJ_P0048185 Birc6 protein_coding protein_coding MGP_CBAJ_T0048186.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83310496 83357348 + Birc6 protein_coding retained_intron MGP_CBAJ_T0048187.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83310526 83510335 + MGP_CBAJ_P0048187 Birc6 protein_coding protein_coding MGP_CBAJ_T0048188.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83334335 83337245 + Birc6 protein_coding retained_intron MGP_CBAJ_T0048189.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83347272 83351325 + Birc6 protein_coding retained_intron MGP_CBAJ_T0048190.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83347299 83353044 + Birc6 protein_coding retained_intron MGP_CBAJ_T0048191.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83350952 83353191 + Birc6 protein_coding retained_intron MGP_CBAJ_T0048192.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83351281 83356290 + Birc6 protein_coding retained_intron MGP_CBAJ_T0048193.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83397842 83420692 + MGP_CBAJ_P0048193 Birc6 protein_coding protein_coding MGP_CBAJ_T0048194.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83402837 83406062 + MGP_CBAJ_P0048194 Birc6 protein_coding protein_coding MGP_CBAJ_T0048195.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83412006 83420691 + MGP_CBAJ_P0048195 Birc6 protein_coding protein_coding MGP_CBAJ_T0048196.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83412375 83441497 + Birc6 protein_coding retained_intron MGP_CBAJ_T0048197.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83412405 83419500 + MGP_CBAJ_P0048197 Birc6 protein_coding protein_coding MGP_CBAJ_T0048198.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83413154 83416438 + Birc6 protein_coding retained_intron MGP_CBAJ_T0048199.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83419131 83420691 + Birc6 protein_coding retained_intron MGP_CBAJ_T0048200.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83454902 83461684 + MGP_CBAJ_P0048200 Birc6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048201.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83454912 83456736 + Birc6 protein_coding processed_transcript MGP_CBAJ_T0048202.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83456659 83511293 + MGP_CBAJ_P0048202 Birc6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048203.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83461565 83471399 + Birc6 protein_coding retained_intron MGP_CBAJ_T0048204.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83472792 83487234 + Birc6 protein_coding retained_intron MGP_CBAJ_T0048205.1 MGP_CBAJ_G0023728.1 mouse_genomes_project 17 83505307 83511015 + Birc6 protein_coding retained_intron MGP_CBAJ_T0046489.1 MGP_CBAJ_G0023231.1 mouse_genomes_project 17 36073346 36106294 + MGP_CBAJ_P0046489 Adamts10 protein_coding protein_coding MGP_CBAJ_T0046490.1 MGP_CBAJ_G0023231.1 mouse_genomes_project 17 36073346 36106294 + MGP_CBAJ_P0046490 Adamts10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046491.1 MGP_CBAJ_G0023231.1 mouse_genomes_project 17 36073351 36106293 + MGP_CBAJ_P0046491 Adamts10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046492.1 MGP_CBAJ_G0023231.1 mouse_genomes_project 17 36073352 36078290 + Adamts10 protein_coding retained_intron MGP_CBAJ_T0046493.1 MGP_CBAJ_G0023231.1 mouse_genomes_project 17 36073368 36106294 + MGP_CBAJ_P0046493 Adamts10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046494.1 MGP_CBAJ_G0023231.1 mouse_genomes_project 17 36077439 36105974 + MGP_CBAJ_P0046494 Adamts10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046495.1 MGP_CBAJ_G0023231.1 mouse_genomes_project 17 36077439 36105974 + MGP_CBAJ_P0046495 Adamts10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046496.1 MGP_CBAJ_G0023231.1 mouse_genomes_project 17 36080782 36106293 + MGP_CBAJ_P0046496 Adamts10 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046497.1 MGP_CBAJ_G0023231.1 mouse_genomes_project 17 36080891 36092732 + Adamts10 protein_coding processed_transcript MGP_CBAJ_T0046498.1 MGP_CBAJ_G0023231.1 mouse_genomes_project 17 36086508 36106294 + Adamts10 protein_coding retained_intron MGP_CBAJ_T0046499.1 MGP_CBAJ_G0023231.1 mouse_genomes_project 17 36086891 36106296 + Adamts10 protein_coding retained_intron MGP_CBAJ_T0046500.1 MGP_CBAJ_G0023231.1 mouse_genomes_project 17 36093032 36106308 + Adamts10 protein_coding retained_intron MGP_CBAJ_T0101713.1 MGP_CBAJ_G0039744.1 mouse_genomes_project 17 37265053 37265406 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047049.1 MGP_CBAJ_G0023351.1 mouse_genomes_project 17 38824872 38831049 - MGP_CBAJ_P0047049 protein_coding protein_coding MGP_CBAJ_T0047050.1 MGP_CBAJ_G0023351.1 mouse_genomes_project 17 38824941 38831022 - protein_coding processed_transcript MGP_CBAJ_T0010053.1 MGP_CBAJ_G0008191.1 mouse_genomes_project 17 21367231 21367326 - Gm26384 miRNA miRNA MGP_CBAJ_T0013102.1 MGP_CBAJ_G0011214.1 mouse_genomes_project 17 59561202 59561564 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013132.1 MGP_CBAJ_G0011244.1 mouse_genomes_project 17 106072634 106072809 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0046269.1 MGP_CBAJ_G0023165.1 mouse_genomes_project 17 31354679 31355189 - MGP_CBAJ_P0046269 Gm17657 protein_coding protein_coding MGP_CBAJ_T0010083.1 MGP_CBAJ_G0008221.1 mouse_genomes_project 17 37818267 37818331 - Mir6972 miRNA miRNA MGP_CBAJ_T0048300.1 MGP_CBAJ_G0023772.1 mouse_genomes_project 17 93378307 93392549 - MGP_CBAJ_P0048300 Cox7a2l protein_coding protein_coding MGP_CBAJ_T0048301.1 MGP_CBAJ_G0023772.1 mouse_genomes_project 17 93378307 93392549 - MGP_CBAJ_P0048301 Cox7a2l protein_coding protein_coding MGP_CBAJ_T0013034.1 MGP_CBAJ_G0011146.1 mouse_genomes_project 17 6780956 6781512 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0048399.1 MGP_CBAJ_G0023809.1 mouse_genomes_project 17 99249488 99311074 + MGP_CBAJ_P0048399 Ppp1r21 protein_coding protein_coding MGP_CBAJ_T0048400.1 MGP_CBAJ_G0023809.1 mouse_genomes_project 17 99249586 99263147 + Ppp1r21 protein_coding retained_intron MGP_CBAJ_T0048401.1 MGP_CBAJ_G0023809.1 mouse_genomes_project 17 99284998 99288698 + Ppp1r21 protein_coding retained_intron MGP_CBAJ_T0048402.1 MGP_CBAJ_G0023809.1 mouse_genomes_project 17 99297789 99300038 + Ppp1r21 protein_coding retained_intron MGP_CBAJ_T0048403.1 MGP_CBAJ_G0023809.1 mouse_genomes_project 17 99297907 99301895 + Ppp1r21 protein_coding retained_intron MGP_CBAJ_T0048404.1 MGP_CBAJ_G0023809.1 mouse_genomes_project 17 99301444 99311072 + Ppp1r21 protein_coding retained_intron MGP_CBAJ_T0046448.1 MGP_CBAJ_G0023212.1 mouse_genomes_project 17 35325108 35343224 - MGP_CBAJ_P0046448 Zfp799 protein_coding protein_coding MGP_CBAJ_T0046449.1 MGP_CBAJ_G0023212.1 mouse_genomes_project 17 35325114 35335917 - MGP_CBAJ_P0046449 Zfp799 protein_coding protein_coding MGP_CBAJ_T0046450.1 MGP_CBAJ_G0023212.1 mouse_genomes_project 17 35334540 35343191 - MGP_CBAJ_P0046450 Zfp799 protein_coding protein_coding MGP_CBAJ_T0046451.1 MGP_CBAJ_G0023212.1 mouse_genomes_project 17 35334794 35343209 - MGP_CBAJ_P0046451 Zfp799 protein_coding protein_coding MGP_CBAJ_T0046452.1 MGP_CBAJ_G0023212.1 mouse_genomes_project 17 35335158 35343178 - MGP_CBAJ_P0046452 Zfp799 protein_coding protein_coding MGP_CBAJ_T0003649.1 MGP_CBAJ_G0003289.1 mouse_genomes_project 17 24592011 24597471 - Gm15947 antisense antisense MGP_CBAJ_T0098988.1 MGP_CBAJ_G0037243.1 mouse_genomes_project 17 30688109 30688281 - Gm23887 snRNA snRNA MGP_CBAJ_T0000957.1 MGP_CBAJ_G0000889.1 mouse_genomes_project 17 57515493 57518746 + TEC TEC MGP_CBAJ_T0047566.1 MGP_CBAJ_G0023519.1 mouse_genomes_project 17 51331285 51376408 - MGP_CBAJ_P0047566 Ttbk1 protein_coding protein_coding MGP_CBAJ_T0047567.1 MGP_CBAJ_G0023519.1 mouse_genomes_project 17 51349545 51372996 - MGP_CBAJ_P0047567 Ttbk1 protein_coding unknown_likely_coding MGP_CBAJ_T0047242.1 MGP_CBAJ_G0023392.1 mouse_genomes_project 17 40417118 40420470 - MGP_CBAJ_P0047242 Ppp1r11 protein_coding protein_coding MGP_CBAJ_T0047243.1 MGP_CBAJ_G0023392.1 mouse_genomes_project 17 40418051 40420498 - MGP_CBAJ_P0047243 Ppp1r11 protein_coding protein_coding MGP_CBAJ_T0047244.1 MGP_CBAJ_G0023392.1 mouse_genomes_project 17 40418116 40420110 - MGP_CBAJ_P0047244 Ppp1r11 protein_coding protein_coding MGP_CBAJ_T0046672.1 MGP_CBAJ_G0023263.1 mouse_genomes_project 17 36854144 36889595 + MGP_CBAJ_P0046672 protein_coding protein_coding MGP_CBAJ_T0047822.1 MGP_CBAJ_G0023592.1 mouse_genomes_project 17 59697550 59716086 - MGP_CBAJ_P0047822 Sult1c2 protein_coding protein_coding MGP_CBAJ_T0101750.1 MGP_CBAJ_G0039781.1 mouse_genomes_project 17 40860003 40860931 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0046835.1 MGP_CBAJ_G0023299.1 mouse_genomes_project 17 37817110 37844144 - MGP_CBAJ_P0046835 Gm20547 protein_coding protein_coding MGP_CBAJ_T0046836.1 MGP_CBAJ_G0023299.1 mouse_genomes_project 17 37817124 37833691 - MGP_CBAJ_P0046836 Gm20547 protein_coding protein_coding MGP_CBAJ_T0045007.1 MGP_CBAJ_G0022797.1 mouse_genomes_project 17 76950 204816 + MGP_CBAJ_P0045007 protein_coding protein_coding MGP_CBAJ_T0099002.1 MGP_CBAJ_G0037257.1 mouse_genomes_project 17 54674381 54674542 + Gm22978 snRNA snRNA MGP_CBAJ_T0048028.1 MGP_CBAJ_G0023681.1 mouse_genomes_project 17 73478289 73514097 - MGP_CBAJ_P0048028 Twsg1 protein_coding protein_coding MGP_CBAJ_T0046604.1 MGP_CBAJ_G0023251.1 mouse_genomes_project 17 36587282 36589354 - Rps18 protein_coding retained_intron MGP_CBAJ_T0046605.1 MGP_CBAJ_G0023251.1 mouse_genomes_project 17 36587282 36591934 - Rps18 protein_coding processed_transcript MGP_CBAJ_T0046606.1 MGP_CBAJ_G0023251.1 mouse_genomes_project 17 36587282 36592385 - MGP_CBAJ_P0046606 Rps18 protein_coding protein_coding MGP_CBAJ_T0046607.1 MGP_CBAJ_G0023251.1 mouse_genomes_project 17 36587282 36592439 - MGP_CBAJ_P0046607 Rps18 protein_coding protein_coding MGP_CBAJ_T0046608.1 MGP_CBAJ_G0023251.1 mouse_genomes_project 17 36587283 36592382 - Rps18 protein_coding retained_intron MGP_CBAJ_T0046609.1 MGP_CBAJ_G0023251.1 mouse_genomes_project 17 36587283 36591203 - Rps18 protein_coding processed_transcript MGP_CBAJ_T0046610.1 MGP_CBAJ_G0023251.1 mouse_genomes_project 17 36587287 36589208 - Rps18 protein_coding retained_intron MGP_CBAJ_T0046611.1 MGP_CBAJ_G0023251.1 mouse_genomes_project 17 36587552 36592375 - Rps18 protein_coding retained_intron MGP_CBAJ_T0046612.1 MGP_CBAJ_G0023251.1 mouse_genomes_project 17 36591546 36592382 - Rps18 protein_coding retained_intron MGP_CBAJ_T0046613.1 MGP_CBAJ_G0023251.1 mouse_genomes_project 17 36592240 36592733 - Rps18 protein_coding processed_transcript MGP_CBAJ_T0010085.1 MGP_CBAJ_G0008223.1 mouse_genomes_project 17 38211583 38211666 - Mir6974 miRNA miRNA MGP_CBAJ_T0047629.1 MGP_CBAJ_G0023544.1 mouse_genomes_project 17 52445869 52456137 + MGP_CBAJ_P0047629 Guca1b protein_coding protein_coding MGP_CBAJ_T0047630.1 MGP_CBAJ_G0023544.1 mouse_genomes_project 17 52445880 52455263 + MGP_CBAJ_P0047630 Guca1b protein_coding protein_coding MGP_CBAJ_T0046332.1 MGP_CBAJ_G0023186.1 mouse_genomes_project 17 33535960 33594396 + MGP_CBAJ_P0046332 Slc37a1 protein_coding protein_coding MGP_CBAJ_T0046333.1 MGP_CBAJ_G0023186.1 mouse_genomes_project 17 33536696 33594396 + MGP_CBAJ_P0046333 Slc37a1 protein_coding protein_coding MGP_CBAJ_T0047196.1 MGP_CBAJ_G0023375.1 mouse_genomes_project 17 39631879 39633074 - MGP_CBAJ_P0047196 protein_coding protein_coding MGP_CBAJ_T0048382.1 MGP_CBAJ_G0023803.1 mouse_genomes_project 17 98186101 98202718 + MGP_CBAJ_P0048382 Epcam protein_coding protein_coding MGP_CBAJ_T0045694.1 MGP_CBAJ_G0023036.1 mouse_genomes_project 17 26015274 26038655 - MGP_CBAJ_P0045694 Tmem204 protein_coding protein_coding MGP_CBAJ_T0045695.1 MGP_CBAJ_G0023036.1 mouse_genomes_project 17 26015476 26035700 - MGP_CBAJ_P0045695 Tmem204 protein_coding protein_coding MGP_CBAJ_T0048348.1 MGP_CBAJ_G0023793.1 mouse_genomes_project 17 97314531 97319531 + MGP_CBAJ_P0048348 Tmem247 protein_coding protein_coding MGP_CBAJ_T0048349.1 MGP_CBAJ_G0023793.1 mouse_genomes_project 17 97315572 97319538 + MGP_CBAJ_P0048349 Tmem247 protein_coding protein_coding MGP_CBAJ_T0003682.1 MGP_CBAJ_G0003313.1 mouse_genomes_project 17 38686403 38687869 - Gm19553 antisense antisense MGP_CBAJ_T0047910.1 MGP_CBAJ_G0023628.1 mouse_genomes_project 17 62918948 62930753 + Safb protein_coding retained_intron MGP_CBAJ_T0047911.1 MGP_CBAJ_G0023628.1 mouse_genomes_project 17 62919097 62941658 + MGP_CBAJ_P0047911 Safb protein_coding protein_coding MGP_CBAJ_T0047912.1 MGP_CBAJ_G0023628.1 mouse_genomes_project 17 62919105 62927950 + MGP_CBAJ_P0047912 Safb protein_coding protein_coding MGP_CBAJ_T0047913.1 MGP_CBAJ_G0023628.1 mouse_genomes_project 17 62919182 62941733 + MGP_CBAJ_P0047913 Safb protein_coding protein_coding MGP_CBAJ_T0047914.1 MGP_CBAJ_G0023628.1 mouse_genomes_project 17 62923084 62936703 + MGP_CBAJ_P0047914 Safb protein_coding nonsense_mediated_decay MGP_CBAJ_T0047915.1 MGP_CBAJ_G0023628.1 mouse_genomes_project 17 62928743 62930741 + Safb protein_coding retained_intron MGP_CBAJ_T0047916.1 MGP_CBAJ_G0023628.1 mouse_genomes_project 17 62931999 62941719 + Safb protein_coding retained_intron MGP_CBAJ_T0047917.1 MGP_CBAJ_G0023628.1 mouse_genomes_project 17 62936859 62939847 + Safb protein_coding retained_intron MGP_CBAJ_T0047918.1 MGP_CBAJ_G0023628.1 mouse_genomes_project 17 62938408 62939982 + Safb protein_coding retained_intron MGP_CBAJ_T0047919.1 MGP_CBAJ_G0023628.1 mouse_genomes_project 17 62939797 62941092 + Safb protein_coding retained_intron MGP_CBAJ_T0047920.1 MGP_CBAJ_G0023628.1 mouse_genomes_project 17 62940660 62941733 + Safb protein_coding retained_intron MGP_CBAJ_T0047921.1 MGP_CBAJ_G0023628.1 mouse_genomes_project 17 62941178 62941713 + Safb protein_coding retained_intron MGP_CBAJ_T0047187.1 MGP_CBAJ_G0023374.1 mouse_genomes_project 17 39554864 39559511 - MGP_CBAJ_P0047187 H2-T3 protein_coding protein_coding MGP_CBAJ_T0047188.1 MGP_CBAJ_G0023374.1 mouse_genomes_project 17 39554865 39559578 - MGP_CBAJ_P0047188 H2-T3 protein_coding protein_coding MGP_CBAJ_T0047189.1 MGP_CBAJ_G0023374.1 mouse_genomes_project 17 39554969 39559542 - H2-T3 protein_coding retained_intron MGP_CBAJ_T0047190.1 MGP_CBAJ_G0023374.1 mouse_genomes_project 17 39555866 39559413 - H2-T3 protein_coding retained_intron MGP_CBAJ_T0047191.1 MGP_CBAJ_G0023374.1 mouse_genomes_project 17 39555866 39559413 - MGP_CBAJ_P0047191 H2-T3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047192.1 MGP_CBAJ_G0023374.1 mouse_genomes_project 17 39555866 39559413 - MGP_CBAJ_P0047192 H2-T3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047193.1 MGP_CBAJ_G0023374.1 mouse_genomes_project 17 39555869 39559413 - MGP_CBAJ_P0047193 H2-T3 protein_coding protein_coding MGP_CBAJ_T0047194.1 MGP_CBAJ_G0023374.1 mouse_genomes_project 17 39555878 39559413 - MGP_CBAJ_P0047194 H2-T3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047195.1 MGP_CBAJ_G0023374.1 mouse_genomes_project 17 39555878 39559413 - MGP_CBAJ_P0047195 H2-T3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046034.1 MGP_CBAJ_G0023117.1 mouse_genomes_project 17 28791502 28880050 - MGP_CBAJ_P0046034 Grm4 protein_coding protein_coding MGP_CBAJ_T0046035.1 MGP_CBAJ_G0023117.1 mouse_genomes_project 17 28795019 28890026 - MGP_CBAJ_P0046035 Grm4 protein_coding protein_coding MGP_CBAJ_T0046036.1 MGP_CBAJ_G0023117.1 mouse_genomes_project 17 28819274 28847438 - Grm4 protein_coding retained_intron MGP_CBAJ_T0046037.1 MGP_CBAJ_G0023117.1 mouse_genomes_project 17 28820746 28847189 - Grm4 protein_coding processed_transcript MGP_CBAJ_T0047602.1 MGP_CBAJ_G0023532.1 mouse_genomes_project 17 51659963 51661101 - Gnmt protein_coding retained_intron MGP_CBAJ_T0047603.1 MGP_CBAJ_G0023532.1 mouse_genomes_project 17 51659963 51664719 - MGP_CBAJ_P0047603 Gnmt protein_coding protein_coding MGP_CBAJ_T0003714.1 MGP_CBAJ_G0003338.1 mouse_genomes_project 17 96578484 96580502 - 2010106C02Rik antisense antisense MGP_CBAJ_T0045586.1 MGP_CBAJ_G0023007.1 mouse_genomes_project 17 25407038 25413555 - MGP_CBAJ_P0045586 Rab26 protein_coding protein_coding MGP_CBAJ_T0045587.1 MGP_CBAJ_G0023007.1 mouse_genomes_project 17 25408890 25413717 - MGP_CBAJ_P0045587 Rab26 protein_coding protein_coding MGP_CBAJ_T0045588.1 MGP_CBAJ_G0023007.1 mouse_genomes_project 17 25408901 25413541 - Rab26 protein_coding retained_intron MGP_CBAJ_T0045589.1 MGP_CBAJ_G0023007.1 mouse_genomes_project 17 25409157 25409785 - Rab26 protein_coding retained_intron MGP_CBAJ_T0045590.1 MGP_CBAJ_G0023007.1 mouse_genomes_project 17 25409379 25414039 - MGP_CBAJ_P0045590 Rab26 protein_coding protein_coding MGP_CBAJ_T0047364.1 MGP_CBAJ_G0023464.1 mouse_genomes_project 17 45085354 45090427 - MGP_CBAJ_P0047364 9130008F23Rik protein_coding protein_coding MGP_CBAJ_T0010056.1 MGP_CBAJ_G0008194.1 mouse_genomes_project 17 25062034 25062112 - Mir5134 miRNA miRNA MGP_CBAJ_T0045958.1 MGP_CBAJ_G0023096.1 mouse_genomes_project 17 27410006 27452507 + MGP_CBAJ_P0045958 Luc7l protein_coding protein_coding MGP_CBAJ_T0045959.1 MGP_CBAJ_G0023096.1 mouse_genomes_project 17 27410047 27457180 + MGP_CBAJ_P0045959 Luc7l protein_coding protein_coding MGP_CBAJ_T0045960.1 MGP_CBAJ_G0023096.1 mouse_genomes_project 17 27410052 27449603 + MGP_CBAJ_P0045960 Luc7l protein_coding protein_coding MGP_CBAJ_T0045961.1 MGP_CBAJ_G0023096.1 mouse_genomes_project 17 27410062 27453662 + MGP_CBAJ_P0045961 Luc7l protein_coding nonsense_mediated_decay MGP_CBAJ_T0045962.1 MGP_CBAJ_G0023096.1 mouse_genomes_project 17 27410062 27453660 + MGP_CBAJ_P0045962 Luc7l protein_coding protein_coding MGP_CBAJ_T0045963.1 MGP_CBAJ_G0023096.1 mouse_genomes_project 17 27410080 27452508 + Luc7l protein_coding retained_intron MGP_CBAJ_T0045964.1 MGP_CBAJ_G0023096.1 mouse_genomes_project 17 27410095 27452511 + MGP_CBAJ_P0045964 Luc7l protein_coding nonsense_mediated_decay MGP_CBAJ_T0045965.1 MGP_CBAJ_G0023096.1 mouse_genomes_project 17 27410318 27432122 + MGP_CBAJ_P0045965 Luc7l protein_coding protein_coding MGP_CBAJ_T0045966.1 MGP_CBAJ_G0023096.1 mouse_genomes_project 17 27410481 27411350 + Luc7l protein_coding processed_transcript MGP_CBAJ_T0045967.1 MGP_CBAJ_G0023096.1 mouse_genomes_project 17 27433003 27453638 + MGP_CBAJ_P0045967 Luc7l protein_coding protein_coding MGP_CBAJ_T0013052.1 MGP_CBAJ_G0011164.1 mouse_genomes_project 17 24829861 24830369 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0045319.1 MGP_CBAJ_G0022913.1 mouse_genomes_project 17 20524407 20525304 + MGP_CBAJ_P0045319 Vmn1r225 protein_coding protein_coding MGP_CBAJ_T0045343.1 MGP_CBAJ_G0022929.1 mouse_genomes_project 17 21527276 21539667 + MGP_CBAJ_P0045343 Zfp54 protein_coding protein_coding MGP_CBAJ_T0045344.1 MGP_CBAJ_G0022929.1 mouse_genomes_project 17 21527282 21539181 + MGP_CBAJ_P0045344 Zfp54 protein_coding protein_coding MGP_CBAJ_T0045345.1 MGP_CBAJ_G0022929.1 mouse_genomes_project 17 21527307 21537972 + MGP_CBAJ_P0045345 Zfp54 protein_coding protein_coding MGP_CBAJ_T0046744.1 MGP_CBAJ_G0023283.1 mouse_genomes_project 17 37526203 37529274 + MGP_CBAJ_P0046744 Ager protein_coding protein_coding MGP_CBAJ_T0046745.1 MGP_CBAJ_G0023283.1 mouse_genomes_project 17 37526203 37529278 + MGP_CBAJ_P0046745 Ager protein_coding protein_coding MGP_CBAJ_T0046746.1 MGP_CBAJ_G0023283.1 mouse_genomes_project 17 37526216 37529249 + Ager protein_coding processed_transcript MGP_CBAJ_T0046747.1 MGP_CBAJ_G0023283.1 mouse_genomes_project 17 37526216 37529249 + Ager protein_coding retained_intron MGP_CBAJ_T0046748.1 MGP_CBAJ_G0023283.1 mouse_genomes_project 17 37526235 37529202 + Ager protein_coding retained_intron MGP_CBAJ_T0046749.1 MGP_CBAJ_G0023283.1 mouse_genomes_project 17 37526235 37529202 + Ager protein_coding retained_intron MGP_CBAJ_T0046750.1 MGP_CBAJ_G0023283.1 mouse_genomes_project 17 37526235 37529202 + Ager protein_coding retained_intron MGP_CBAJ_T0046751.1 MGP_CBAJ_G0023283.1 mouse_genomes_project 17 37526235 37529238 + Ager protein_coding retained_intron MGP_CBAJ_T0046752.1 MGP_CBAJ_G0023283.1 mouse_genomes_project 17 37526235 37529202 + Ager protein_coding retained_intron MGP_CBAJ_T0046753.1 MGP_CBAJ_G0023283.1 mouse_genomes_project 17 37526235 37529202 + Ager protein_coding retained_intron MGP_CBAJ_T0046754.1 MGP_CBAJ_G0023283.1 mouse_genomes_project 17 37526235 37529202 + Ager protein_coding retained_intron MGP_CBAJ_T0046755.1 MGP_CBAJ_G0023283.1 mouse_genomes_project 17 37526235 37529238 + MGP_CBAJ_P0046755 Ager protein_coding protein_coding MGP_CBAJ_T0046756.1 MGP_CBAJ_G0023283.1 mouse_genomes_project 17 37526235 37529238 + MGP_CBAJ_P0046756 Ager protein_coding nonsense_mediated_decay MGP_CBAJ_T0046757.1 MGP_CBAJ_G0023284.1 mouse_genomes_project 17 37529441 37531834 - MGP_CBAJ_P0046757 Rnf5 protein_coding unknown_likely_coding MGP_CBAJ_T0046758.1 MGP_CBAJ_G0023284.1 mouse_genomes_project 17 37529658 37531737 - Rnf5 protein_coding retained_intron MGP_CBAJ_T0046759.1 MGP_CBAJ_G0023284.1 mouse_genomes_project 17 37530144 37532022 - Rnf5 protein_coding retained_intron MGP_CBAJ_T0006796.1 MGP_CBAJ_G0005592.1 mouse_genomes_project 17 8535431 8540134 + 1700110C19Rik lincRNA lincRNA MGP_CBAJ_T0006797.1 MGP_CBAJ_G0005592.1 mouse_genomes_project 17 8535431 8540134 + 1700110C19Rik lincRNA lincRNA MGP_CBAJ_T0010076.1 MGP_CBAJ_G0008214.1 mouse_genomes_project 17 34783763 34783822 + Gm22201 miRNA miRNA MGP_CBAJ_T0045427.1 MGP_CBAJ_G0022965.1 mouse_genomes_project 17 24386607 24389689 + MGP_CBAJ_P0045427 Cldn6 protein_coding protein_coding MGP_CBAJ_T0046576.1 MGP_CBAJ_G0023246.1 mouse_genomes_project 17 36547520 36548694 + MGP_CBAJ_P0046576 Zbtb22 protein_coding protein_coding MGP_CBAJ_T0046577.1 MGP_CBAJ_G0023246.1 mouse_genomes_project 17 36547787 36550876 + MGP_CBAJ_P0046577 Zbtb22 protein_coding protein_coding MGP_CBAJ_T0048219.1 MGP_CBAJ_G0023734.1 mouse_genomes_project 17 87684062 87725764 - MGP_CBAJ_P0048219 Fez2 protein_coding protein_coding MGP_CBAJ_T0048220.1 MGP_CBAJ_G0023734.1 mouse_genomes_project 17 87684062 87725764 - MGP_CBAJ_P0048220 Fez2 protein_coding protein_coding MGP_CBAJ_T0047376.1 MGP_CBAJ_G0023472.1 mouse_genomes_project 17 47198057 47299515 - MGP_CBAJ_P0047376 protein_coding protein_coding MGP_CBAJ_T0047688.1 MGP_CBAJ_G0023559.1 mouse_genomes_project 17 52849330 52913841 + MGP_CBAJ_P0047688 Tfeb protein_coding protein_coding MGP_CBAJ_T0047689.1 MGP_CBAJ_G0023559.1 mouse_genomes_project 17 52849900 52907354 + MGP_CBAJ_P0047689 Tfeb protein_coding protein_coding MGP_CBAJ_T0047690.1 MGP_CBAJ_G0023559.1 mouse_genomes_project 17 52850227 52913837 + MGP_CBAJ_P0047690 Tfeb protein_coding protein_coding MGP_CBAJ_T0047691.1 MGP_CBAJ_G0023559.1 mouse_genomes_project 17 52851202 52910460 + MGP_CBAJ_P0047691 Tfeb protein_coding protein_coding MGP_CBAJ_T0047692.1 MGP_CBAJ_G0023559.1 mouse_genomes_project 17 52869732 52907354 + MGP_CBAJ_P0047692 Tfeb protein_coding protein_coding MGP_CBAJ_T0047693.1 MGP_CBAJ_G0023559.1 mouse_genomes_project 17 52874605 52907466 + MGP_CBAJ_P0047693 Tfeb protein_coding protein_coding MGP_CBAJ_T0047694.1 MGP_CBAJ_G0023559.1 mouse_genomes_project 17 52878602 52907567 + MGP_CBAJ_P0047694 Tfeb protein_coding protein_coding MGP_CBAJ_T0047695.1 MGP_CBAJ_G0023559.1 mouse_genomes_project 17 52887716 52907569 + MGP_CBAJ_P0047695 Tfeb protein_coding protein_coding MGP_CBAJ_T0047696.1 MGP_CBAJ_G0023559.1 mouse_genomes_project 17 52887716 52907571 + MGP_CBAJ_P0047696 Tfeb protein_coding protein_coding MGP_CBAJ_T0047697.1 MGP_CBAJ_G0023559.1 mouse_genomes_project 17 52904108 52907647 + MGP_CBAJ_P0047697 Tfeb protein_coding protein_coding MGP_CBAJ_T0047698.1 MGP_CBAJ_G0023559.1 mouse_genomes_project 17 52906989 52913837 + MGP_CBAJ_P0047698 Tfeb protein_coding protein_coding MGP_CBAJ_T0047699.1 MGP_CBAJ_G0023559.1 mouse_genomes_project 17 52907424 52913838 + MGP_CBAJ_P0047699 Tfeb protein_coding protein_coding MGP_CBAJ_T0047700.1 MGP_CBAJ_G0023559.1 mouse_genomes_project 17 52908947 52911106 + Tfeb protein_coding processed_transcript MGP_CBAJ_T0047701.1 MGP_CBAJ_G0023559.1 mouse_genomes_project 17 52909289 52910328 + Tfeb protein_coding retained_intron MGP_CBAJ_T0047702.1 MGP_CBAJ_G0023559.1 mouse_genomes_project 17 52910830 52913035 + Tfeb protein_coding retained_intron MGP_CBAJ_T0003686.1 MGP_CBAJ_G0003317.1 mouse_genomes_project 17 39156628 39171912 + Gm16279 antisense antisense MGP_CBAJ_T0045724.1 MGP_CBAJ_G0023042.1 mouse_genomes_project 17 26156356 26211352 + MGP_CBAJ_P0045724 protein_coding protein_coding MGP_CBAJ_T0045725.1 MGP_CBAJ_G0023042.1 mouse_genomes_project 17 26156879 26211352 + MGP_CBAJ_P0045725 protein_coding protein_coding MGP_CBAJ_T0045726.1 MGP_CBAJ_G0023042.1 mouse_genomes_project 17 26157410 26180141 + MGP_CBAJ_P0045726 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045727.1 MGP_CBAJ_G0023042.1 mouse_genomes_project 17 26185082 26187775 + protein_coding retained_intron MGP_CBAJ_T0045728.1 MGP_CBAJ_G0023042.1 mouse_genomes_project 17 26199523 26206379 + MGP_CBAJ_P0045728 protein_coding protein_coding MGP_CBAJ_T0045729.1 MGP_CBAJ_G0023042.1 mouse_genomes_project 17 26199566 26211351 + MGP_CBAJ_P0045729 protein_coding protein_coding MGP_CBAJ_T0045731.1 MGP_CBAJ_G0023042.1 mouse_genomes_project 17 26199763 26208776 + MGP_CBAJ_P0045731 protein_coding protein_coding MGP_CBAJ_T0048415.1 MGP_CBAJ_G0023813.1 mouse_genomes_project 17 99746989 99977967 - MGP_CBAJ_P0048415 Fshr protein_coding protein_coding MGP_CBAJ_T0045971.1 MGP_CBAJ_G0023099.1 mouse_genomes_project 17 27620286 27647205 + MGP_CBAJ_P0045971 Neurl1b protein_coding protein_coding MGP_CBAJ_T0045972.1 MGP_CBAJ_G0023099.1 mouse_genomes_project 17 27620286 27647205 + MGP_CBAJ_P0045972 Neurl1b protein_coding protein_coding MGP_CBAJ_T0045973.1 MGP_CBAJ_G0023099.1 mouse_genomes_project 17 27620367 27651693 + MGP_CBAJ_P0045973 Neurl1b protein_coding protein_coding MGP_CBAJ_T0046708.1 MGP_CBAJ_G0023274.1 mouse_genomes_project 17 37087132 37103543 + MGP_CBAJ_P0046708 H2-Eb2 protein_coding protein_coding MGP_CBAJ_T0100245.1 MGP_CBAJ_G0038500.1 mouse_genomes_project 17 25408273 25408351 + Snord60 snoRNA snoRNA MGP_CBAJ_T0045019.1 MGP_CBAJ_G0022804.1 mouse_genomes_project 17 2778445 2819031 - MGP_CBAJ_P0045019 Tmem242 protein_coding protein_coding MGP_CBAJ_T0045021.1 MGP_CBAJ_G0022804.1 mouse_genomes_project 17 2811082 2819047 - MGP_CBAJ_P0045021 Tmem242 protein_coding protein_coding MGP_CBAJ_T0045022.1 MGP_CBAJ_G0022804.1 mouse_genomes_project 17 2811812 2819044 - MGP_CBAJ_P0045022 Tmem242 protein_coding protein_coding MGP_CBAJ_T0046917.1 MGP_CBAJ_G0023314.1 mouse_genomes_project 17 38033901 38042546 + MGP_CBAJ_P0046917 Clic1 protein_coding protein_coding MGP_CBAJ_T0046918.1 MGP_CBAJ_G0023314.1 mouse_genomes_project 17 38036305 38039536 + Clic1 protein_coding retained_intron MGP_CBAJ_T0006808.1 MGP_CBAJ_G0005603.1 mouse_genomes_project 17 24211321 24212866 + Gm26695 lincRNA lincRNA MGP_CBAJ_T0013128.1 MGP_CBAJ_G0011240.1 mouse_genomes_project 17 101471032 101471367 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0045874.1 MGP_CBAJ_G0023078.1 mouse_genomes_project 17 26953996 26955693 + MGP_CBAJ_P0045874 Mettl26 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045875.1 MGP_CBAJ_G0023078.1 mouse_genomes_project 17 26954032 26955702 + MGP_CBAJ_P0045875 Mettl26 protein_coding protein_coding MGP_CBAJ_T0045876.1 MGP_CBAJ_G0023078.1 mouse_genomes_project 17 26954033 26955702 + MGP_CBAJ_P0045876 Mettl26 protein_coding protein_coding MGP_CBAJ_T0045877.1 MGP_CBAJ_G0023078.1 mouse_genomes_project 17 26954062 26964449 + MGP_CBAJ_P0045877 Mettl26 protein_coding protein_coding MGP_CBAJ_T0045878.1 MGP_CBAJ_G0023078.1 mouse_genomes_project 17 26954062 26955530 + MGP_CBAJ_P0045878 Mettl26 protein_coding protein_coding MGP_CBAJ_T0048405.1 MGP_CBAJ_G0023810.1 mouse_genomes_project 17 99320339 99356997 + MGP_CBAJ_P0048405 Ston1 protein_coding protein_coding MGP_CBAJ_T0048406.1 MGP_CBAJ_G0023810.1 mouse_genomes_project 17 99320351 99367043 + Ston1 protein_coding processed_transcript MGP_CBAJ_T0048407.1 MGP_CBAJ_G0023810.1 mouse_genomes_project 17 99347736 99367445 + MGP_CBAJ_P0048407 Ston1 protein_coding protein_coding MGP_CBAJ_T0048408.1 MGP_CBAJ_G0023810.1 mouse_genomes_project 17 99347736 99373124 + MGP_CBAJ_P0048408 Ston1 protein_coding protein_coding MGP_CBAJ_T0048409.1 MGP_CBAJ_G0023810.1 mouse_genomes_project 17 99347790 99387136 + MGP_CBAJ_P0048409 Ston1 protein_coding protein_coding MGP_CBAJ_T0048410.1 MGP_CBAJ_G0023810.1 mouse_genomes_project 17 99348014 99358566 + Ston1 protein_coding retained_intron MGP_CBAJ_T0048411.1 MGP_CBAJ_G0023810.1 mouse_genomes_project 17 99348545 99358566 + Ston1 protein_coding retained_intron MGP_CBAJ_T0045425.1 MGP_CBAJ_G0022964.1 mouse_genomes_project 17 24382695 24384697 - MGP_CBAJ_P0045425 Tnfrsf12a protein_coding protein_coding MGP_CBAJ_T0045426.1 MGP_CBAJ_G0022964.1 mouse_genomes_project 17 24382695 24384697 - MGP_CBAJ_P0045426 Tnfrsf12a protein_coding protein_coding MGP_CBAJ_T0047884.1 MGP_CBAJ_G0023624.1 mouse_genomes_project 17 62616282 62649481 + MGP_CBAJ_P0047884 Kdm4b protein_coding protein_coding MGP_CBAJ_T0047885.1 MGP_CBAJ_G0023624.1 mouse_genomes_project 17 62616294 62706307 + MGP_CBAJ_P0047885 Kdm4b protein_coding protein_coding MGP_CBAJ_T0047886.1 MGP_CBAJ_G0023624.1 mouse_genomes_project 17 62616311 62706302 + MGP_CBAJ_P0047886 Kdm4b protein_coding protein_coding MGP_CBAJ_T0047887.1 MGP_CBAJ_G0023624.1 mouse_genomes_project 17 62672706 62689623 + Kdm4b protein_coding processed_transcript MGP_CBAJ_T0047888.1 MGP_CBAJ_G0023624.1 mouse_genomes_project 17 62696961 62697230 + Kdm4b protein_coding processed_transcript MGP_CBAJ_T0047889.1 MGP_CBAJ_G0023624.1 mouse_genomes_project 17 62697364 62706313 + MGP_CBAJ_P0047889 Kdm4b protein_coding protein_coding MGP_CBAJ_T0047090.1 MGP_CBAJ_G0023357.1 mouse_genomes_project 17 39068244 39080332 + MGP_CBAJ_P0047090 Flot1 protein_coding protein_coding MGP_CBAJ_T0047091.1 MGP_CBAJ_G0023357.1 mouse_genomes_project 17 39068285 39080151 + MGP_CBAJ_P0047091 Flot1 protein_coding protein_coding MGP_CBAJ_T0047092.1 MGP_CBAJ_G0023357.1 mouse_genomes_project 17 39068320 39077560 + MGP_CBAJ_P0047092 Flot1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047093.1 MGP_CBAJ_G0023357.1 mouse_genomes_project 17 39068364 39069338 + Flot1 protein_coding retained_intron MGP_CBAJ_T0047094.1 MGP_CBAJ_G0023357.1 mouse_genomes_project 17 39068464 39070683 + MGP_CBAJ_P0047094 Flot1 protein_coding protein_coding MGP_CBAJ_T0047095.1 MGP_CBAJ_G0023357.1 mouse_genomes_project 17 39068487 39070695 + MGP_CBAJ_P0047095 Flot1 protein_coding protein_coding MGP_CBAJ_T0047096.1 MGP_CBAJ_G0023357.1 mouse_genomes_project 17 39068531 39070682 + MGP_CBAJ_P0047096 Flot1 protein_coding protein_coding MGP_CBAJ_T0047097.1 MGP_CBAJ_G0023357.1 mouse_genomes_project 17 39068935 39069868 + Flot1 protein_coding retained_intron MGP_CBAJ_T0047098.1 MGP_CBAJ_G0023357.1 mouse_genomes_project 17 39077621 39080167 + Flot1 protein_coding retained_intron MGP_CBAJ_T0047099.1 MGP_CBAJ_G0023357.1 mouse_genomes_project 17 39078034 39080181 + Flot1 protein_coding retained_intron MGP_CBAJ_T0047100.1 MGP_CBAJ_G0023357.1 mouse_genomes_project 17 39078173 39079004 + Flot1 protein_coding retained_intron MGP_CBAJ_T0045338.1 MGP_CBAJ_G0022925.1 mouse_genomes_project 17 21342550 21344987 + MGP_CBAJ_P0045338 Vmn1r235 protein_coding protein_coding MGP_CBAJ_T0003716.1 MGP_CBAJ_G0003340.1 mouse_genomes_project 17 97820428 97822652 - 0610012D04Rik antisense antisense MGP_CBAJ_T0048444.1 MGP_CBAJ_G0023816.1 mouse_genomes_project 17 102208919 102210249 + MGP_CBAJ_P0048444 protein_coding protein_coding MGP_CBAJ_T0003679.1 MGP_CBAJ_G0003310.1 mouse_genomes_project 17 37956837 37961726 - Gm10501 antisense antisense MGP_CBAJ_T0047276.1 MGP_CBAJ_G0023399.1 mouse_genomes_project 17 40545833 40576996 + MGP_CBAJ_P0047276 Gabbr1 protein_coding protein_coding MGP_CBAJ_T0047277.1 MGP_CBAJ_G0023399.1 mouse_genomes_project 17 40545887 40576219 + MGP_CBAJ_P0047277 Gabbr1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047278.1 MGP_CBAJ_G0023399.1 mouse_genomes_project 17 40545895 40549338 + MGP_CBAJ_P0047278 Gabbr1 protein_coding protein_coding MGP_CBAJ_T0047279.1 MGP_CBAJ_G0023399.1 mouse_genomes_project 17 40546066 40546708 + Gabbr1 protein_coding retained_intron MGP_CBAJ_T0047280.1 MGP_CBAJ_G0023399.1 mouse_genomes_project 17 40546435 40549338 + MGP_CBAJ_P0047280 Gabbr1 protein_coding protein_coding MGP_CBAJ_T0047281.1 MGP_CBAJ_G0023399.1 mouse_genomes_project 17 40548448 40550998 + Gabbr1 protein_coding processed_transcript MGP_CBAJ_T0047282.1 MGP_CBAJ_G0023399.1 mouse_genomes_project 17 40550501 40576233 + MGP_CBAJ_P0047282 Gabbr1 protein_coding protein_coding MGP_CBAJ_T0047283.1 MGP_CBAJ_G0023399.1 mouse_genomes_project 17 40550544 40556221 + MGP_CBAJ_P0047283 Gabbr1 protein_coding protein_coding MGP_CBAJ_T0047284.1 MGP_CBAJ_G0023399.1 mouse_genomes_project 17 40555575 40556728 + Gabbr1 protein_coding retained_intron MGP_CBAJ_T0047285.1 MGP_CBAJ_G0023399.1 mouse_genomes_project 17 40562859 40564732 + Gabbr1 protein_coding retained_intron MGP_CBAJ_T0047286.1 MGP_CBAJ_G0023399.1 mouse_genomes_project 17 40572384 40574153 + Gabbr1 protein_coding retained_intron MGP_CBAJ_T0046898.1 MGP_CBAJ_G0023311.1 mouse_genomes_project 17 38001018 38011314 + MGP_CBAJ_P0046898 Vwa7 protein_coding protein_coding MGP_CBAJ_T0046899.1 MGP_CBAJ_G0023311.1 mouse_genomes_project 17 38001077 38011088 + MGP_CBAJ_P0046899 Vwa7 protein_coding protein_coding MGP_CBAJ_T0098997.1 MGP_CBAJ_G0037252.1 mouse_genomes_project 17 45136757 45136905 - Gm23078 snRNA snRNA MGP_CBAJ_T0100241.1 MGP_CBAJ_G0038496.1 mouse_genomes_project 17 10696021 10696161 + Gm24794 snoRNA snoRNA MGP_CBAJ_T0047117.1 MGP_CBAJ_G0023362.1 mouse_genomes_project 17 39135077 39149533 + MGP_CBAJ_P0047117 Dhx16 protein_coding protein_coding MGP_CBAJ_T0047118.1 MGP_CBAJ_G0023362.1 mouse_genomes_project 17 39135083 39149488 + MGP_CBAJ_P0047118 Dhx16 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047119.1 MGP_CBAJ_G0023362.1 mouse_genomes_project 17 39142969 39144836 + Dhx16 protein_coding retained_intron MGP_CBAJ_T0047120.1 MGP_CBAJ_G0023362.1 mouse_genomes_project 17 39143177 39143895 + Dhx16 protein_coding retained_intron MGP_CBAJ_T0047121.1 MGP_CBAJ_G0023362.1 mouse_genomes_project 17 39143183 39143983 + Dhx16 protein_coding retained_intron MGP_CBAJ_T0047122.1 MGP_CBAJ_G0023362.1 mouse_genomes_project 17 39143267 39144734 + Dhx16 protein_coding retained_intron MGP_CBAJ_T0047123.1 MGP_CBAJ_G0023362.1 mouse_genomes_project 17 39144522 39149529 + MGP_CBAJ_P0047123 Dhx16 protein_coding protein_coding MGP_CBAJ_T0047124.1 MGP_CBAJ_G0023362.1 mouse_genomes_project 17 39147707 39149416 + Dhx16 protein_coding retained_intron MGP_CBAJ_T0048324.1 MGP_CBAJ_G0023782.1 mouse_genomes_project 17 94769496 94866244 - MGP_CBAJ_P0048324 Lrpprc protein_coding protein_coding MGP_CBAJ_T0048325.1 MGP_CBAJ_G0023782.1 mouse_genomes_project 17 94777031 94795432 - Lrpprc protein_coding processed_transcript MGP_CBAJ_T0048326.1 MGP_CBAJ_G0023782.1 mouse_genomes_project 17 94795427 94823900 - MGP_CBAJ_P0048326 Lrpprc protein_coding nonsense_mediated_decay MGP_CBAJ_T0048327.1 MGP_CBAJ_G0023782.1 mouse_genomes_project 17 94821418 94823900 - Lrpprc protein_coding retained_intron MGP_CBAJ_T0048328.1 MGP_CBAJ_G0023782.1 mouse_genomes_project 17 94842244 94866475 - Lrpprc protein_coding retained_intron MGP_CBAJ_T0048329.1 MGP_CBAJ_G0023782.1 mouse_genomes_project 17 94843405 94866248 - Lrpprc protein_coding retained_intron MGP_CBAJ_T0048330.1 MGP_CBAJ_G0023782.1 mouse_genomes_project 17 94846151 94853229 - Lrpprc protein_coding processed_transcript MGP_CBAJ_T0047581.1 MGP_CBAJ_G0023524.1 mouse_genomes_project 17 51551913 51567356 - MGP_CBAJ_P0047581 Klc4 protein_coding unknown_likely_coding MGP_CBAJ_T0013059.1 MGP_CBAJ_G0011171.1 mouse_genomes_project 17 36628448 36628711 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0047982.1 MGP_CBAJ_G0023664.1 mouse_genomes_project 17 64256683 64257136 - MGP_CBAJ_P0047982 Gm21834 protein_coding protein_coding MGP_CBAJ_T0045826.1 MGP_CBAJ_G0023069.1 mouse_genomes_project 17 26871166 26883314 + MGP_CBAJ_P0045826 Fbxl16 protein_coding protein_coding MGP_CBAJ_T0047838.1 MGP_CBAJ_G0023605.1 mouse_genomes_project 17 62168574 62174725 + MGP_CBAJ_P0047838 Shd protein_coding protein_coding MGP_CBAJ_T0047839.1 MGP_CBAJ_G0023605.1 mouse_genomes_project 17 62168623 62174737 + MGP_CBAJ_P0047839 Shd protein_coding unknown_likely_coding MGP_CBAJ_T0047321.1 MGP_CBAJ_G0023431.1 mouse_genomes_project 17 41460068 41461190 + MGP_CBAJ_P0047321 Olfr124 protein_coding protein_coding MGP_CBAJ_T0000962.1 MGP_CBAJ_G0000894.1 mouse_genomes_project 17 79708316 79731207 - TEC TEC MGP_CBAJ_T0047660.1 MGP_CBAJ_G0023550.1 mouse_genomes_project 17 52689060 52701521 - MGP_CBAJ_P0047660 Bysl protein_coding protein_coding MGP_CBAJ_T0046259.1 MGP_CBAJ_G0023163.1 mouse_genomes_project 17 31165255 31185917 + MGP_CBAJ_P0046259 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046260.1 MGP_CBAJ_G0023163.1 mouse_genomes_project 17 31165273 31169400 + protein_coding processed_transcript MGP_CBAJ_T0046261.1 MGP_CBAJ_G0023163.1 mouse_genomes_project 17 31165283 31171353 + protein_coding retained_intron MGP_CBAJ_T0046262.1 MGP_CBAJ_G0023163.1 mouse_genomes_project 17 31165283 31185810 + MGP_CBAJ_P0046262 protein_coding protein_coding MGP_CBAJ_T0046263.1 MGP_CBAJ_G0023163.1 mouse_genomes_project 17 31165434 31185562 + MGP_CBAJ_P0046263 protein_coding unknown_likely_coding MGP_CBAJ_T0046264.1 MGP_CBAJ_G0023163.1 mouse_genomes_project 17 31169777 31172308 + protein_coding retained_intron MGP_CBAJ_T0046265.1 MGP_CBAJ_G0023163.1 mouse_genomes_project 17 31173313 31179391 + protein_coding retained_intron MGP_CBAJ_T0046266.1 MGP_CBAJ_G0023163.1 mouse_genomes_project 17 31173325 31178763 + protein_coding retained_intron MGP_CBAJ_T0046267.1 MGP_CBAJ_G0023163.1 mouse_genomes_project 17 31182788 31184705 + protein_coding processed_transcript MGP_CBAJ_T0047741.1 MGP_CBAJ_G0023571.1 mouse_genomes_project 17 53610481 53617762 + MGP_CBAJ_P0047741 Treml1 protein_coding protein_coding MGP_CBAJ_T0099016.1 MGP_CBAJ_G0037271.1 mouse_genomes_project 17 94668133 94668242 + Gm26066 snRNA snRNA MGP_CBAJ_T0045557.1 MGP_CBAJ_G0023004.1 mouse_genomes_project 17 25340215 25341801 + MGP_CBAJ_P0045557 Bricd5 protein_coding protein_coding MGP_CBAJ_T0045558.1 MGP_CBAJ_G0023004.1 mouse_genomes_project 17 25340298 25341719 + MGP_CBAJ_P0045558 Bricd5 protein_coding protein_coding MGP_CBAJ_T0045435.1 MGP_CBAJ_G0022969.1 mouse_genomes_project 17 24443944 24453011 - MGP_CBAJ_P0045435 Paqr4 protein_coding protein_coding MGP_CBAJ_T0045153.1 MGP_CBAJ_G0022850.1 mouse_genomes_project 17 11021645 11075130 + MGP_CBAJ_P0045153 Slc22a2 protein_coding protein_coding MGP_CBAJ_T0046978.1 MGP_CBAJ_G0023329.1 mouse_genomes_project 17 38143489 38159110 - MGP_CBAJ_P0046978 Prrc2a protein_coding protein_coding MGP_CBAJ_T0046979.1 MGP_CBAJ_G0023329.1 mouse_genomes_project 17 38143503 38157183 - MGP_CBAJ_P0046979 Prrc2a protein_coding protein_coding MGP_CBAJ_T0046980.1 MGP_CBAJ_G0023329.1 mouse_genomes_project 17 38143592 38144779 - Prrc2a protein_coding retained_intron MGP_CBAJ_T0046981.1 MGP_CBAJ_G0023329.1 mouse_genomes_project 17 38144745 38145365 - Prrc2a protein_coding retained_intron MGP_CBAJ_T0046982.1 MGP_CBAJ_G0023329.1 mouse_genomes_project 17 38146414 38147474 - Prrc2a protein_coding retained_intron MGP_CBAJ_T0046983.1 MGP_CBAJ_G0023329.1 mouse_genomes_project 17 38151346 38159048 - Prrc2a protein_coding processed_transcript MGP_CBAJ_T0006799.1 MGP_CBAJ_G0005594.1 mouse_genomes_project 17 12127636 12136619 + Gm16050 lincRNA lincRNA MGP_CBAJ_T0013105.1 MGP_CBAJ_G0011217.1 mouse_genomes_project 17 59771942 59772274 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098992.1 MGP_CBAJ_G0037247.1 mouse_genomes_project 17 36297910 36297986 + Gm22943 snRNA snRNA MGP_CBAJ_T0003646.1 MGP_CBAJ_G0003286.1 mouse_genomes_project 17 12427130 12427746 - Gm16052 antisense antisense MGP_CBAJ_T0047230.1 MGP_CBAJ_G0023387.1 mouse_genomes_project 17 40324230 40330935 - MGP_CBAJ_P0047230 Trim15 protein_coding protein_coding MGP_CBAJ_T0047231.1 MGP_CBAJ_G0023387.1 mouse_genomes_project 17 40324232 40330958 - MGP_CBAJ_P0047231 Trim15 protein_coding protein_coding MGP_CBAJ_T0047232.1 MGP_CBAJ_G0023387.1 mouse_genomes_project 17 40324850 40330494 - MGP_CBAJ_P0047232 Trim15 protein_coding nonsense_mediated_decay MGP_CBAJ_T0006836.1 MGP_CBAJ_G0005624.1 mouse_genomes_project 17 36362236 36364619 - 4931413I07Rik lincRNA lincRNA MGP_CBAJ_T0045641.1 MGP_CBAJ_G0023028.1 mouse_genomes_project 17 25812271 25815999 - MGP_CBAJ_P0045641 Nubp2 protein_coding protein_coding MGP_CBAJ_T0013129.1 MGP_CBAJ_G0011241.1 mouse_genomes_project 17 101699290 101700531 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0048250.1 MGP_CBAJ_G0023747.1 mouse_genomes_project 17 88730424 88751618 - MGP_CBAJ_P0048250 Cdc42ep3 protein_coding protein_coding MGP_CBAJ_T0045390.1 MGP_CBAJ_G0022953.1 mouse_genomes_project 17 23711661 23738497 - Zfp40 protein_coding processed_transcript MGP_CBAJ_T0045391.1 MGP_CBAJ_G0022953.1 mouse_genomes_project 17 23712989 23738486 - MGP_CBAJ_P0045391 Zfp40 protein_coding protein_coding MGP_CBAJ_T0045392.1 MGP_CBAJ_G0022953.1 mouse_genomes_project 17 23715053 23738538 - Zfp40 protein_coding processed_transcript MGP_CBAJ_T0045393.1 MGP_CBAJ_G0022953.1 mouse_genomes_project 17 23736632 23738539 - MGP_CBAJ_P0045393 Zfp40 protein_coding protein_coding MGP_CBAJ_T0045272.1 MGP_CBAJ_G0022883.1 mouse_genomes_project 17 16715456 16782620 + MGP_CBAJ_P0045272 Lix1 protein_coding protein_coding MGP_CBAJ_T0045273.1 MGP_CBAJ_G0022883.1 mouse_genomes_project 17 16771836 16782620 + Lix1 protein_coding processed_transcript MGP_CBAJ_T0045013.1 MGP_CBAJ_G0022802.1 mouse_genomes_project 17 2310047 2426447 + Arid1b protein_coding processed_transcript MGP_CBAJ_T0045014.1 MGP_CBAJ_G0022802.1 mouse_genomes_project 17 2313265 2697965 + MGP_CBAJ_P0045014 Arid1b protein_coding protein_coding MGP_CBAJ_T0045015.1 MGP_CBAJ_G0022802.1 mouse_genomes_project 17 2313421 2698982 + MGP_CBAJ_P0045015 Arid1b protein_coding protein_coding MGP_CBAJ_T0045016.1 MGP_CBAJ_G0022802.1 mouse_genomes_project 17 2314755 2426900 + Arid1b protein_coding retained_intron MGP_CBAJ_T0045017.1 MGP_CBAJ_G0022802.1 mouse_genomes_project 17 2364469 2461650 + Arid1b protein_coding retained_intron MGP_CBAJ_T0047426.1 MGP_CBAJ_G0023489.1 mouse_genomes_project 17 50181037 50216075 - MGP_CBAJ_P0047426 Spats1 protein_coding protein_coding MGP_CBAJ_T0101730.1 MGP_CBAJ_G0039761.1 mouse_genomes_project 17 39582499 39583416 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0101707.1 MGP_CBAJ_G0039738.1 mouse_genomes_project 17 35472015 35478986 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0045502.1 MGP_CBAJ_G0022991.1 mouse_genomes_project 17 24989587 25011844 - MGP_CBAJ_P0045502 Gm43796 protein_coding protein_coding MGP_CBAJ_T0047875.1 MGP_CBAJ_G0023621.1 mouse_genomes_project 17 62556653 62571048 - MGP_CBAJ_P0047875 Plin3 protein_coding protein_coding MGP_CBAJ_T0048315.1 MGP_CBAJ_G0023777.1 mouse_genomes_project 17 94174738 94479925 - MGP_CBAJ_P0048315 Thada protein_coding protein_coding MGP_CBAJ_T0046076.1 MGP_CBAJ_G0023125.1 mouse_genomes_project 17 29181543 29259797 - MGP_CBAJ_P0046076 D17Wsu92e protein_coding protein_coding MGP_CBAJ_T0046077.1 MGP_CBAJ_G0023125.1 mouse_genomes_project 17 29181557 29259730 - MGP_CBAJ_P0046077 D17Wsu92e protein_coding protein_coding MGP_CBAJ_T0046078.1 MGP_CBAJ_G0023125.1 mouse_genomes_project 17 29200659 29259781 - MGP_CBAJ_P0046078 D17Wsu92e protein_coding protein_coding MGP_CBAJ_T0045457.1 MGP_CBAJ_G0022976.1 mouse_genomes_project 17 24572960 24580300 - MGP_CBAJ_P0045457 Prss41 protein_coding protein_coding MGP_CBAJ_T0045458.1 MGP_CBAJ_G0022976.1 mouse_genomes_project 17 24572960 24580283 - MGP_CBAJ_P0045458 Prss41 protein_coding protein_coding MGP_CBAJ_T0045459.1 MGP_CBAJ_G0022976.1 mouse_genomes_project 17 24577248 24580300 - MGP_CBAJ_P0045459 Prss41 protein_coding protein_coding MGP_CBAJ_T0045460.1 MGP_CBAJ_G0022976.1 mouse_genomes_project 17 24578377 24580277 - Prss41 protein_coding retained_intron MGP_CBAJ_T0048254.1 MGP_CBAJ_G0023750.1 mouse_genomes_project 17 89145413 89153498 - MGP_CBAJ_P0048254 Cyp1b1 protein_coding protein_coding MGP_CBAJ_T0101745.1 MGP_CBAJ_G0039776.1 mouse_genomes_project 17 40153785 40270352 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099015.1 MGP_CBAJ_G0037270.1 mouse_genomes_project 17 94401708 94401815 + Gm24722 snRNA snRNA MGP_CBAJ_T0046028.1 MGP_CBAJ_G0023114.1 mouse_genomes_project 17 28444398 28455639 - MGP_CBAJ_P0046028 Uqcc2 protein_coding protein_coding MGP_CBAJ_T0046029.1 MGP_CBAJ_G0023114.1 mouse_genomes_project 17 28444403 28455345 - Uqcc2 protein_coding processed_transcript MGP_CBAJ_T0046030.1 MGP_CBAJ_G0023114.1 mouse_genomes_project 17 28444405 28455624 - MGP_CBAJ_P0046030 Uqcc2 protein_coding protein_coding MGP_CBAJ_T0046031.1 MGP_CBAJ_G0023114.1 mouse_genomes_project 17 28444405 28455351 - MGP_CBAJ_P0046031 Uqcc2 protein_coding protein_coding MGP_CBAJ_T0098998.1 MGP_CBAJ_G0037253.1 mouse_genomes_project 17 47975162 47975305 + Gm25135 snRNA snRNA MGP_CBAJ_T0010052.1 MGP_CBAJ_G0008190.1 mouse_genomes_project 17 17193264 17193332 + Mir125a miRNA miRNA MGP_CBAJ_T0101714.1 MGP_CBAJ_G0039745.1 mouse_genomes_project 17 37265056 37265211 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0013096.1 MGP_CBAJ_G0011208.1 mouse_genomes_project 17 53182841 53183035 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017313.1 MGP_CBAJ_G0015092.1 mouse_genomes_project 17 37917369 37918376 - processed_transcript retained_intron MGP_CBAJ_T0017314.1 MGP_CBAJ_G0015092.1 mouse_genomes_project 17 37917372 37919587 - processed_transcript retained_intron MGP_CBAJ_T0017315.1 MGP_CBAJ_G0015092.1 mouse_genomes_project 17 37917372 37919602 - processed_transcript lincRNA MGP_CBAJ_T0017316.1 MGP_CBAJ_G0015092.1 mouse_genomes_project 17 37917372 37919579 - processed_transcript lincRNA MGP_CBAJ_T0017317.1 MGP_CBAJ_G0015092.1 mouse_genomes_project 17 37917373 37919565 - processed_transcript retained_intron MGP_CBAJ_T0017318.1 MGP_CBAJ_G0015092.1 mouse_genomes_project 17 37917374 37919599 - processed_transcript lincRNA MGP_CBAJ_T0017319.1 MGP_CBAJ_G0015092.1 mouse_genomes_project 17 37918576 37919599 - processed_transcript retained_intron MGP_CBAJ_T0017320.1 MGP_CBAJ_G0015092.1 mouse_genomes_project 17 37918724 37919593 - processed_transcript retained_intron MGP_CBAJ_T0046655.1 MGP_CBAJ_G0023260.1 mouse_genomes_project 17 36768454 36771336 + MGP_CBAJ_P0046655 H2-Oa protein_coding protein_coding MGP_CBAJ_T0046656.1 MGP_CBAJ_G0023260.1 mouse_genomes_project 17 36768536 36771335 + H2-Oa protein_coding retained_intron MGP_CBAJ_T0046539.1 MGP_CBAJ_G0023239.1 mouse_genomes_project 17 36395222 36407640 + MGP_CBAJ_P0046539 Kank3 protein_coding protein_coding MGP_CBAJ_T0046540.1 MGP_CBAJ_G0023239.1 mouse_genomes_project 17 36395225 36407639 + MGP_CBAJ_P0046540 Kank3 protein_coding protein_coding MGP_CBAJ_T0046541.1 MGP_CBAJ_G0023239.1 mouse_genomes_project 17 36395225 36407636 + MGP_CBAJ_P0046541 Kank3 protein_coding protein_coding MGP_CBAJ_T0046542.1 MGP_CBAJ_G0023239.1 mouse_genomes_project 17 36395231 36406880 + Kank3 protein_coding retained_intron MGP_CBAJ_T0046544.1 MGP_CBAJ_G0023239.1 mouse_genomes_project 17 36406551 36406997 + Kank3 protein_coding retained_intron MGP_CBAJ_T0046545.1 MGP_CBAJ_G0023239.1 mouse_genomes_project 17 36406864 36407639 + MGP_CBAJ_P0046545 Kank3 protein_coding protein_coding MGP_CBAJ_T0047947.1 MGP_CBAJ_G0023648.1 mouse_genomes_project 17 63431527 63442031 - MGP_CBAJ_P0047947 Khsrp protein_coding protein_coding MGP_CBAJ_T0047942.1 MGP_CBAJ_G0023645.1 mouse_genomes_project 17 63405159 63407131 + MGP_CBAJ_P0047942 Alkbh7 protein_coding protein_coding MGP_CBAJ_T0047943.1 MGP_CBAJ_G0023645.1 mouse_genomes_project 17 63405163 63407142 + MGP_CBAJ_P0047943 Alkbh7 protein_coding protein_coding MGP_CBAJ_T0047944.1 MGP_CBAJ_G0023645.1 mouse_genomes_project 17 63406300 63406958 + Alkbh7 protein_coding retained_intron MGP_CBAJ_T0013089.1 MGP_CBAJ_G0011201.1 mouse_genomes_project 17 41761988 41762850 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003676.1 MGP_CBAJ_G0003308.1 mouse_genomes_project 17 36941762 36956702 - antisense antisense MGP_CBAJ_T0003677.1 MGP_CBAJ_G0003308.1 mouse_genomes_project 17 36947450 36958170 - antisense antisense MGP_CBAJ_T0017304.1 MGP_CBAJ_G0015086.1 mouse_genomes_project 17 31782755 31789733 + Gm16758 processed_transcript processed_transcript MGP_CBAJ_T0013054.1 MGP_CBAJ_G0011166.1 mouse_genomes_project 17 27435065 27439379 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006795.1 MGP_CBAJ_G0005591.1 mouse_genomes_project 17 7229633 7252705 - 6530411M01Rik lincRNA lincRNA MGP_CBAJ_T0000946.1 MGP_CBAJ_G0000879.1 mouse_genomes_project 17 10094869 10101436 - TEC TEC MGP_CBAJ_T0047579.1 MGP_CBAJ_G0023522.1 mouse_genomes_project 17 51447972 51457286 - MGP_CBAJ_P0047579 Srf protein_coding protein_coding MGP_CBAJ_T0048156.1 MGP_CBAJ_G0023711.1 mouse_genomes_project 17 80127033 80136355 - MGP_CBAJ_P0048156 BC027072 protein_coding protein_coding MGP_CBAJ_T0047316.1 MGP_CBAJ_G0023426.1 mouse_genomes_project 17 41298655 41299676 + MGP_CBAJ_P0047316 Olfr118 protein_coding protein_coding MGP_CBAJ_T0101763.1 MGP_CBAJ_G0039794.1 mouse_genomes_project 17 62030723 62031371 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0046358.1 MGP_CBAJ_G0023189.1 mouse_genomes_project 17 33782861 33799385 + MGP_CBAJ_P0046358 Ndufv3 protein_coding protein_coding MGP_CBAJ_T0046359.1 MGP_CBAJ_G0023189.1 mouse_genomes_project 17 33782896 33795898 + Ndufv3 protein_coding processed_transcript MGP_CBAJ_T0046360.1 MGP_CBAJ_G0023189.1 mouse_genomes_project 17 33782904 33799388 + MGP_CBAJ_P0046360 Ndufv3 protein_coding protein_coding MGP_CBAJ_T0046361.1 MGP_CBAJ_G0023189.1 mouse_genomes_project 17 33782931 33795301 + MGP_CBAJ_P0046361 Ndufv3 protein_coding protein_coding MGP_CBAJ_T0046362.1 MGP_CBAJ_G0023189.1 mouse_genomes_project 17 33797150 33799388 + Ndufv3 protein_coding processed_transcript MGP_CBAJ_T0000949.1 MGP_CBAJ_G0000881.1 mouse_genomes_project 17 33800352 33803473 - TEC TEC MGP_CBAJ_T0048391.1 MGP_CBAJ_G0023807.1 mouse_genomes_project 17 98614082 98697942 - MGP_CBAJ_P0048391 Fbxo11 protein_coding protein_coding MGP_CBAJ_T0048392.1 MGP_CBAJ_G0023807.1 mouse_genomes_project 17 98614082 98701491 - MGP_CBAJ_P0048392 Fbxo11 protein_coding protein_coding MGP_CBAJ_T0048393.1 MGP_CBAJ_G0023807.1 mouse_genomes_project 17 98614641 98634841 - MGP_CBAJ_P0048393 Fbxo11 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048394.1 MGP_CBAJ_G0023807.1 mouse_genomes_project 17 98616436 98624212 - Fbxo11 protein_coding retained_intron MGP_CBAJ_T0011307.1 MGP_CBAJ_G0009445.1 mouse_genomes_project 17 77641516 77641755 - Gm22967 misc_RNA misc_RNA MGP_CBAJ_T0047831.1 MGP_CBAJ_G0023598.1 mouse_genomes_project 17 61821915 61887445 - MGP_CBAJ_P0047831 Pot1b protein_coding protein_coding MGP_CBAJ_T0046005.1 MGP_CBAJ_G0023109.1 mouse_genomes_project 17 28223540 28257500 + MGP_CBAJ_P0046005 Syngap1 protein_coding protein_coding MGP_CBAJ_T0046006.1 MGP_CBAJ_G0023109.1 mouse_genomes_project 17 28223729 28255688 + MGP_CBAJ_P0046006 Syngap1 protein_coding protein_coding MGP_CBAJ_T0046007.1 MGP_CBAJ_G0023109.1 mouse_genomes_project 17 28223739 28255648 + MGP_CBAJ_P0046007 Syngap1 protein_coding protein_coding MGP_CBAJ_T0046008.1 MGP_CBAJ_G0023109.1 mouse_genomes_project 17 28223786 28256228 + MGP_CBAJ_P0046008 Syngap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046009.1 MGP_CBAJ_G0023109.1 mouse_genomes_project 17 28237396 28256040 + MGP_CBAJ_P0046009 Syngap1 protein_coding protein_coding MGP_CBAJ_T0046010.1 MGP_CBAJ_G0023109.1 mouse_genomes_project 17 28242629 28257500 + MGP_CBAJ_P0046010 Syngap1 protein_coding protein_coding MGP_CBAJ_T0046011.1 MGP_CBAJ_G0023109.1 mouse_genomes_project 17 28243085 28245371 + MGP_CBAJ_P0046011 Syngap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046012.1 MGP_CBAJ_G0023109.1 mouse_genomes_project 17 28245097 28245815 + Syngap1 protein_coding retained_intron MGP_CBAJ_T0046013.1 MGP_CBAJ_G0023109.1 mouse_genomes_project 17 28247565 28255669 + MGP_CBAJ_P0046013 Syngap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046014.1 MGP_CBAJ_G0023109.1 mouse_genomes_project 17 28248271 28255698 + MGP_CBAJ_P0046014 Syngap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046015.1 MGP_CBAJ_G0023109.1 mouse_genomes_project 17 28248285 28255694 + MGP_CBAJ_P0046015 Syngap1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0098986.1 MGP_CBAJ_G0037241.1 mouse_genomes_project 17 14825943 14826050 - Gm25598 snRNA snRNA MGP_CBAJ_T0003680.1 MGP_CBAJ_G0003311.1 mouse_genomes_project 17 38111122 38118102 - antisense antisense MGP_CBAJ_T0048169.1 MGP_CBAJ_G0023718.1 mouse_genomes_project 17 82070467 82315173 - MGP_CBAJ_P0048169 Galnt14 protein_coding protein_coding MGP_CBAJ_T0048170.1 MGP_CBAJ_G0023718.1 mouse_genomes_project 17 82084817 82315137 - MGP_CBAJ_P0048170 Galnt14 protein_coding protein_coding MGP_CBAJ_T0048171.1 MGP_CBAJ_G0023718.1 mouse_genomes_project 17 82160178 82315175 - Galnt14 protein_coding retained_intron MGP_CBAJ_T0045603.1 MGP_CBAJ_G0023016.1 mouse_genomes_project 17 25606454 25610759 + MGP_CBAJ_P0045603 Noxo1 protein_coding protein_coding MGP_CBAJ_T0045605.1 MGP_CBAJ_G0023016.1 mouse_genomes_project 17 25608252 25608585 + Noxo1 protein_coding processed_transcript MGP_CBAJ_T0045606.1 MGP_CBAJ_G0023016.1 mouse_genomes_project 17 25608405 25609632 + Noxo1 protein_coding processed_transcript MGP_CBAJ_T0045607.1 MGP_CBAJ_G0023016.1 mouse_genomes_project 17 25608462 25610755 + Noxo1 protein_coding retained_intron MGP_CBAJ_T0045608.1 MGP_CBAJ_G0023016.1 mouse_genomes_project 17 25608468 25610543 + Noxo1 protein_coding retained_intron MGP_CBAJ_T0045609.1 MGP_CBAJ_G0023016.1 mouse_genomes_project 17 25608541 25609396 + Noxo1 protein_coding retained_intron MGP_CBAJ_T0045610.1 MGP_CBAJ_G0023016.1 mouse_genomes_project 17 25608570 25609908 + Noxo1 protein_coding processed_transcript MGP_CBAJ_T0045611.1 MGP_CBAJ_G0023016.1 mouse_genomes_project 17 25608755 25610754 + Noxo1 protein_coding processed_transcript MGP_CBAJ_T0045612.1 MGP_CBAJ_G0023016.1 mouse_genomes_project 17 25609622 25610746 + Noxo1 protein_coding processed_transcript MGP_CBAJ_T0101721.1 MGP_CBAJ_G0039752.1 mouse_genomes_project 17 38513531 38514514 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047287.1 MGP_CBAJ_G0023400.1 mouse_genomes_project 17 40586512 40587558 - MGP_CBAJ_P0047287 Olfr90 protein_coding protein_coding MGP_CBAJ_T0011295.1 MGP_CBAJ_G0009433.1 mouse_genomes_project 17 30792038 30792209 + Gm27599 misc_RNA misc_RNA MGP_CBAJ_T0045633.1 MGP_CBAJ_G0023024.1 mouse_genomes_project 17 25733055 25769643 + MGP_CBAJ_P0045633 Meiob protein_coding protein_coding MGP_CBAJ_T0046932.1 MGP_CBAJ_G0023319.1 mouse_genomes_project 17 38060769 38062126 + MGP_CBAJ_P0046932 Ly6g6e protein_coding protein_coding MGP_CBAJ_T0046933.1 MGP_CBAJ_G0023319.1 mouse_genomes_project 17 38060798 38062382 + MGP_CBAJ_P0046933 Ly6g6e protein_coding protein_coding MGP_CBAJ_T0046934.1 MGP_CBAJ_G0023319.1 mouse_genomes_project 17 38060804 38062632 + MGP_CBAJ_P0046934 Ly6g6e protein_coding protein_coding MGP_CBAJ_T0046935.1 MGP_CBAJ_G0023319.1 mouse_genomes_project 17 38061022 38062117 + MGP_CBAJ_P0046935 Ly6g6e protein_coding protein_coding MGP_CBAJ_T0047211.1 MGP_CBAJ_G0023379.1 mouse_genomes_project 17 39717171 39720467 - MGP_CBAJ_P0047211 H2-M10.1 protein_coding protein_coding MGP_CBAJ_T0047212.1 MGP_CBAJ_G0023379.1 mouse_genomes_project 17 39717514 39720489 - MGP_CBAJ_P0047212 H2-M10.1 protein_coding protein_coding MGP_CBAJ_T0047213.1 MGP_CBAJ_G0023380.1 mouse_genomes_project 17 39911059 39914477 - MGP_CBAJ_P0047213 H2-M10.4 protein_coding protein_coding MGP_CBAJ_T0013124.1 MGP_CBAJ_G0011236.1 mouse_genomes_project 17 88408805 88409782 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0048068.1 MGP_CBAJ_G0023693.1 mouse_genomes_project 17 76170075 76374046 + L3mbtl4 protein_coding retained_intron MGP_CBAJ_T0048069.1 MGP_CBAJ_G0023693.1 mouse_genomes_project 17 76170075 76551216 + MGP_CBAJ_P0048069 L3mbtl4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048070.1 MGP_CBAJ_G0023693.1 mouse_genomes_project 17 76170075 76561842 + MGP_CBAJ_P0048070 L3mbtl4 protein_coding protein_coding MGP_CBAJ_T0048071.1 MGP_CBAJ_G0023693.1 mouse_genomes_project 17 76170075 76713835 + MGP_CBAJ_P0048071 L3mbtl4 protein_coding protein_coding MGP_CBAJ_T0046298.1 MGP_CBAJ_G0023172.1 mouse_genomes_project 17 31712980 31781326 - MGP_CBAJ_P0046298 Mdga1 protein_coding protein_coding MGP_CBAJ_T0046299.1 MGP_CBAJ_G0023172.1 mouse_genomes_project 17 31712982 31780578 - MGP_CBAJ_P0046299 Mdga1 protein_coding protein_coding MGP_CBAJ_T0046300.1 MGP_CBAJ_G0023172.1 mouse_genomes_project 17 31717078 31730462 - Mdga1 protein_coding retained_intron MGP_CBAJ_T0046301.1 MGP_CBAJ_G0023172.1 mouse_genomes_project 17 31717288 31720357 - Mdga1 protein_coding processed_transcript MGP_CBAJ_T0046302.1 MGP_CBAJ_G0023172.1 mouse_genomes_project 17 31717305 31727951 - MGP_CBAJ_P0046302 Mdga1 protein_coding protein_coding MGP_CBAJ_T0046303.1 MGP_CBAJ_G0023172.1 mouse_genomes_project 17 31730159 31870693 - MGP_CBAJ_P0046303 Mdga1 protein_coding protein_coding MGP_CBAJ_T0046304.1 MGP_CBAJ_G0023172.1 mouse_genomes_project 17 31737730 31780178 - MGP_CBAJ_P0046304 Mdga1 protein_coding protein_coding MGP_CBAJ_T0046305.1 MGP_CBAJ_G0023172.1 mouse_genomes_project 17 31738610 31782622 - Mdga1 protein_coding processed_transcript MGP_CBAJ_T0047032.1 MGP_CBAJ_G0023345.1 mouse_genomes_project 17 38690052 38694117 - MGP_CBAJ_P0047032 Tcf19 protein_coding protein_coding MGP_CBAJ_T0047033.1 MGP_CBAJ_G0023345.1 mouse_genomes_project 17 38690055 38694078 - MGP_CBAJ_P0047033 Tcf19 protein_coding protein_coding MGP_CBAJ_T0047034.1 MGP_CBAJ_G0023345.1 mouse_genomes_project 17 38691946 38694113 - MGP_CBAJ_P0047034 Tcf19 protein_coding protein_coding MGP_CBAJ_T0047035.1 MGP_CBAJ_G0023345.1 mouse_genomes_project 17 38692110 38693840 - MGP_CBAJ_P0047035 Tcf19 protein_coding protein_coding MGP_CBAJ_T0010082.1 MGP_CBAJ_G0008220.1 mouse_genomes_project 17 37805776 37805843 - Mir6970 miRNA miRNA MGP_CBAJ_T0045398.1 MGP_CBAJ_G0022958.1 mouse_genomes_project 17 24233513 24251436 - MGP_CBAJ_P0045398 Zfp13 protein_coding protein_coding MGP_CBAJ_T0045399.1 MGP_CBAJ_G0022958.1 mouse_genomes_project 17 24233520 24272708 - MGP_CBAJ_P0045399 Zfp13 protein_coding protein_coding MGP_CBAJ_T0047254.1 MGP_CBAJ_G0023396.1 mouse_genomes_project 17 40459362 40464790 - H2-M5 protein_coding retained_intron MGP_CBAJ_T0047255.1 MGP_CBAJ_G0023396.1 mouse_genomes_project 17 40460384 40464221 - MGP_CBAJ_P0047255 H2-M5 protein_coding unknown_likely_coding MGP_CBAJ_T0047256.1 MGP_CBAJ_G0023396.1 mouse_genomes_project 17 40460384 40464431 - MGP_CBAJ_P0047256 H2-M5 protein_coding unknown_likely_coding MGP_CBAJ_T0047257.1 MGP_CBAJ_G0023396.1 mouse_genomes_project 17 40462113 40464757 - MGP_CBAJ_P0047257 H2-M5 protein_coding protein_coding MGP_CBAJ_T0047258.1 MGP_CBAJ_G0023396.1 mouse_genomes_project 17 40462373 40464447 - MGP_CBAJ_P0047258 H2-M5 protein_coding protein_coding MGP_CBAJ_T0047259.1 MGP_CBAJ_G0023396.1 mouse_genomes_project 17 40462373 40464447 - MGP_CBAJ_P0047259 H2-M5 protein_coding protein_coding MGP_CBAJ_T0047260.1 MGP_CBAJ_G0023396.1 mouse_genomes_project 17 40462755 40464304 - MGP_CBAJ_P0047260 H2-M5 protein_coding protein_coding MGP_CBAJ_T0006823.1 MGP_CBAJ_G0005615.1 mouse_genomes_project 17 30726987 30728741 - lincRNA lincRNA MGP_CBAJ_T0003709.1 MGP_CBAJ_G0003333.1 mouse_genomes_project 17 77284675 77286522 - 2410021H03Rik antisense antisense MGP_CBAJ_T0045275.1 MGP_CBAJ_G0022885.1 mouse_genomes_project 17 17036256 17069118 + MGP_CBAJ_P0045275 Vmn2r90 protein_coding protein_coding MGP_CBAJ_T0048273.1 MGP_CBAJ_G0023758.1 mouse_genomes_project 17 89829099 89842840 + MGP_CBAJ_P0048273 Morn2 protein_coding protein_coding MGP_CBAJ_T0048446.1 MGP_CBAJ_G0023818.1 mouse_genomes_project 17 106043818 106065837 - MGP_CBAJ_P0048446 Mettl4 protein_coding protein_coding MGP_CBAJ_T0010100.1 MGP_CBAJ_G0008238.1 mouse_genomes_project 17 71879813 71879915 + Mir6420 miRNA miRNA MGP_CBAJ_T0048077.1 MGP_CBAJ_G0023697.1 mouse_genomes_project 17 78044101 79048399 + MGP_CBAJ_P0048077 Dlgap1 protein_coding protein_coding MGP_CBAJ_T0048078.1 MGP_CBAJ_G0023697.1 mouse_genomes_project 17 78044274 79046710 + MGP_CBAJ_P0048078 Dlgap1 protein_coding protein_coding MGP_CBAJ_T0048079.1 MGP_CBAJ_G0023697.1 mouse_genomes_project 17 78044396 78663599 + Dlgap1 protein_coding retained_intron MGP_CBAJ_T0048080.1 MGP_CBAJ_G0023697.1 mouse_genomes_project 17 78044396 78169125 + Dlgap1 protein_coding retained_intron MGP_CBAJ_T0048081.1 MGP_CBAJ_G0023697.1 mouse_genomes_project 17 78044401 78831484 + Dlgap1 protein_coding retained_intron MGP_CBAJ_T0048082.1 MGP_CBAJ_G0023697.1 mouse_genomes_project 17 78044430 79042782 + MGP_CBAJ_P0048082 Dlgap1 protein_coding protein_coding MGP_CBAJ_T0048083.1 MGP_CBAJ_G0023697.1 mouse_genomes_project 17 78044449 78747327 + Dlgap1 protein_coding retained_intron MGP_CBAJ_T0048084.1 MGP_CBAJ_G0023697.1 mouse_genomes_project 17 78548482 79046788 + MGP_CBAJ_P0048084 Dlgap1 protein_coding protein_coding MGP_CBAJ_T0048085.1 MGP_CBAJ_G0023697.1 mouse_genomes_project 17 78660818 79045220 + MGP_CBAJ_P0048085 Dlgap1 protein_coding protein_coding MGP_CBAJ_T0048086.1 MGP_CBAJ_G0023697.1 mouse_genomes_project 17 78666830 78748698 + Dlgap1 protein_coding retained_intron MGP_CBAJ_T0048087.1 MGP_CBAJ_G0023697.1 mouse_genomes_project 17 78666889 79005456 + Dlgap1 protein_coding retained_intron MGP_CBAJ_T0048088.1 MGP_CBAJ_G0023697.1 mouse_genomes_project 17 78666889 79048395 + MGP_CBAJ_P0048088 Dlgap1 protein_coding protein_coding MGP_CBAJ_T0048089.1 MGP_CBAJ_G0023697.1 mouse_genomes_project 17 78666898 79045531 + MGP_CBAJ_P0048089 Dlgap1 protein_coding protein_coding MGP_CBAJ_T0048090.1 MGP_CBAJ_G0023697.1 mouse_genomes_project 17 78666915 79045288 + MGP_CBAJ_P0048090 Dlgap1 protein_coding protein_coding MGP_CBAJ_T0048091.1 MGP_CBAJ_G0023697.1 mouse_genomes_project 17 78707288 78912150 + Dlgap1 protein_coding retained_intron MGP_CBAJ_T0048092.1 MGP_CBAJ_G0023697.1 mouse_genomes_project 17 78707523 79043079 + MGP_CBAJ_P0048092 Dlgap1 protein_coding protein_coding MGP_CBAJ_T0099006.1 MGP_CBAJ_G0037261.1 mouse_genomes_project 17 66256168 66256275 - Gm23203 snRNA snRNA MGP_CBAJ_T0048445.1 MGP_CBAJ_G0023817.1 mouse_genomes_project 17 104398965 104407200 + MGP_CBAJ_P0048445 Adcyap1 protein_coding protein_coding MGP_CBAJ_T0010088.1 MGP_CBAJ_G0008226.1 mouse_genomes_project 17 39123086 39123182 - Gm28033 miRNA miRNA MGP_CBAJ_T0045346.1 MGP_CBAJ_G0022930.1 mouse_genomes_project 17 21559359 21577553 + MGP_CBAJ_P0045346 Zfp51 protein_coding protein_coding MGP_CBAJ_T0006837.1 MGP_CBAJ_G0005625.1 mouse_genomes_project 17 36535588 36538209 + lincRNA lincRNA MGP_CBAJ_T0013110.1 MGP_CBAJ_G0011222.1 mouse_genomes_project 17 60452916 60453057 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0017291.1 MGP_CBAJ_G0015080.1 mouse_genomes_project 17 20762071 20763097 + Vmn1r227 processed_transcript pseudogene MGP_CBAJ_T0047217.1 MGP_CBAJ_G0023383.1 mouse_genomes_project 17 40083407 40085648 - MGP_CBAJ_P0047217 protein_coding protein_coding MGP_CBAJ_T0045259.1 MGP_CBAJ_G0022880.1 mouse_genomes_project 17 14459757 14483141 - MGP_CBAJ_P0045259 Prdm9 protein_coding protein_coding MGP_CBAJ_T0045260.1 MGP_CBAJ_G0022880.1 mouse_genomes_project 17 14461455 14473731 - Prdm9 protein_coding retained_intron MGP_CBAJ_T0045261.1 MGP_CBAJ_G0022880.1 mouse_genomes_project 17 14461568 14473263 - Prdm9 protein_coding retained_intron MGP_CBAJ_T0045262.1 MGP_CBAJ_G0022880.1 mouse_genomes_project 17 14471083 14484181 - MGP_CBAJ_P0045262 Prdm9 protein_coding protein_coding MGP_CBAJ_T0045263.1 MGP_CBAJ_G0022880.1 mouse_genomes_project 17 14478473 14484195 - Prdm9 protein_coding retained_intron MGP_CBAJ_T0045264.1 MGP_CBAJ_G0022880.1 mouse_genomes_project 17 14482655 14484163 - Prdm9 protein_coding processed_transcript MGP_CBAJ_T0048140.1 MGP_CBAJ_G0023706.1 mouse_genomes_project 17 79800848 79802440 - Gm4707 protein_coding translated_processed_pseudogene MGP_CBAJ_T0048141.1 MGP_CBAJ_G0023706.1 mouse_genomes_project 17 79801546 79801822 - MGP_CBAJ_P0048141 Gm4707 protein_coding protein_coding MGP_CBAJ_T0048142.1 MGP_CBAJ_G0023706.1 mouse_genomes_project 17 79802351 79802917 - MGP_CBAJ_P0048142 Gm4707 protein_coding protein_coding MGP_CBAJ_T0046463.1 MGP_CBAJ_G0023216.1 mouse_genomes_project 17 35486042 35499383 + MGP_CBAJ_P0046463 Zfp472 protein_coding protein_coding MGP_CBAJ_T0045429.1 MGP_CBAJ_G0022967.1 mouse_genomes_project 17 24405111 24423972 - protein_coding retained_intron MGP_CBAJ_T0045430.1 MGP_CBAJ_G0022967.1 mouse_genomes_project 17 24405111 24421906 - MGP_CBAJ_P0045430 protein_coding protein_coding MGP_CBAJ_T0045431.1 MGP_CBAJ_G0022967.1 mouse_genomes_project 17 24405111 24423972 - MGP_CBAJ_P0045431 protein_coding protein_coding MGP_CBAJ_T0045432.1 MGP_CBAJ_G0022967.1 mouse_genomes_project 17 24405678 24423129 - protein_coding retained_intron MGP_CBAJ_T0045433.1 MGP_CBAJ_G0022967.1 mouse_genomes_project 17 24405678 24406960 - protein_coding retained_intron MGP_CBAJ_T0101744.1 MGP_CBAJ_G0039775.1 mouse_genomes_project 17 40140125 40140453 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047308.1 MGP_CBAJ_G0023419.1 mouse_genomes_project 17 41116408 41119144 + MGP_CBAJ_P0047308 protein_coding protein_coding MGP_CBAJ_T0045010.1 MGP_CBAJ_G0022799.1 mouse_genomes_project 17 612778 655845 - MGP_CBAJ_P0045010 Tfb1m protein_coding protein_coding MGP_CBAJ_T0047297.1 MGP_CBAJ_G0023410.1 mouse_genomes_project 17 40834421 40838708 + MGP_CBAJ_P0047297 H2-M3 protein_coding protein_coding MGP_CBAJ_T0047465.1 MGP_CBAJ_G0023497.1 mouse_genomes_project 17 50364655 50365791 - MGP_CBAJ_P0047465 Gm7325 protein_coding protein_coding MGP_CBAJ_T0047466.1 MGP_CBAJ_G0023497.1 mouse_genomes_project 17 50364655 50365756 - MGP_CBAJ_P0047466 Gm7325 protein_coding protein_coding MGP_CBAJ_T0047467.1 MGP_CBAJ_G0023497.1 mouse_genomes_project 17 50364655 50365604 - MGP_CBAJ_P0047467 Gm7325 protein_coding protein_coding MGP_CBAJ_T0013081.1 MGP_CBAJ_G0011193.1 mouse_genomes_project 17 41350221 41350594 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0045300.1 MGP_CBAJ_G0022895.1 mouse_genomes_project 17 17943541 17978048 + MGP_CBAJ_P0045300 Vmn2r95 protein_coding protein_coding MGP_CBAJ_T0046505.1 MGP_CBAJ_G0023233.1 mouse_genomes_project 17 36186243 36193784 + MGP_CBAJ_P0046505 Zfp414 protein_coding protein_coding MGP_CBAJ_T0046506.1 MGP_CBAJ_G0023233.1 mouse_genomes_project 17 36186243 36193721 + MGP_CBAJ_P0046506 Zfp414 protein_coding protein_coding MGP_CBAJ_T0046507.1 MGP_CBAJ_G0023233.1 mouse_genomes_project 17 36186254 36192962 + Zfp414 protein_coding retained_intron MGP_CBAJ_T0046508.1 MGP_CBAJ_G0023233.1 mouse_genomes_project 17 36186274 36193469 + MGP_CBAJ_P0046508 Zfp414 protein_coding protein_coding MGP_CBAJ_T0046509.1 MGP_CBAJ_G0023233.1 mouse_genomes_project 17 36186367 36192690 + MGP_CBAJ_P0046509 Zfp414 protein_coding protein_coding MGP_CBAJ_T0046510.1 MGP_CBAJ_G0023233.1 mouse_genomes_project 17 36192202 36192776 + Zfp414 protein_coding retained_intron MGP_CBAJ_T0046511.1 MGP_CBAJ_G0023233.1 mouse_genomes_project 17 36193093 36193695 + Zfp414 protein_coding retained_intron MGP_CBAJ_T0006854.1 MGP_CBAJ_G0005640.1 mouse_genomes_project 17 50512723 50567300 + lincRNA lincRNA MGP_CBAJ_T0006855.1 MGP_CBAJ_G0005640.1 mouse_genomes_project 17 50534729 50579035 + lincRNA lincRNA MGP_CBAJ_T0003630.1 MGP_CBAJ_G0003281.1 mouse_genomes_project 17 5752028 5832789 - antisense antisense MGP_CBAJ_T0003631.1 MGP_CBAJ_G0003281.1 mouse_genomes_project 17 5798226 5832369 - antisense antisense MGP_CBAJ_T0003632.1 MGP_CBAJ_G0003281.1 mouse_genomes_project 17 5803080 5832789 - antisense antisense MGP_CBAJ_T0047186.1 MGP_CBAJ_G0023373.1 mouse_genomes_project 17 39335192 39348888 + MGP_CBAJ_P0047186 protein_coding protein_coding MGP_CBAJ_T0101694.1 MGP_CBAJ_G0039725.1 mouse_genomes_project 17 20407148 20407899 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0046314.1 MGP_CBAJ_G0023177.1 mouse_genomes_project 17 33082320 33130114 + MGP_CBAJ_P0046314 Glp1r protein_coding protein_coding MGP_CBAJ_T0046132.1 MGP_CBAJ_G0023136.1 mouse_genomes_project 17 29861397 29867415 + MGP_CBAJ_P0046132 Rpl10a protein_coding protein_coding MGP_CBAJ_T0046133.1 MGP_CBAJ_G0023136.1 mouse_genomes_project 17 29861509 29862565 + Rpl10a protein_coding retained_intron MGP_CBAJ_T0046134.1 MGP_CBAJ_G0023136.1 mouse_genomes_project 17 29861510 29867415 + MGP_CBAJ_P0046134 Rpl10a protein_coding nonsense_mediated_decay MGP_CBAJ_T0046135.1 MGP_CBAJ_G0023136.1 mouse_genomes_project 17 29861536 29862322 + Rpl10a protein_coding retained_intron MGP_CBAJ_T0046136.1 MGP_CBAJ_G0023136.1 mouse_genomes_project 17 29861573 29862449 + Rpl10a protein_coding retained_intron MGP_CBAJ_T0046137.1 MGP_CBAJ_G0023136.1 mouse_genomes_project 17 29861737 29867080 + Rpl10a protein_coding retained_intron MGP_CBAJ_T0046138.1 MGP_CBAJ_G0023136.1 mouse_genomes_project 17 29862204 29867410 + Rpl10a protein_coding retained_intron MGP_CBAJ_T0047164.1 MGP_CBAJ_G0023367.1 mouse_genomes_project 17 39232712 39245675 - MGP_CBAJ_P0047164 Abcf1 protein_coding protein_coding MGP_CBAJ_T0047165.1 MGP_CBAJ_G0023367.1 mouse_genomes_project 17 39233180 39234380 - Abcf1 protein_coding retained_intron MGP_CBAJ_T0047166.1 MGP_CBAJ_G0023367.1 mouse_genomes_project 17 39233194 39234082 - Abcf1 protein_coding retained_intron MGP_CBAJ_T0047167.1 MGP_CBAJ_G0023367.1 mouse_genomes_project 17 39233964 39235360 - Abcf1 protein_coding retained_intron MGP_CBAJ_T0047168.1 MGP_CBAJ_G0023367.1 mouse_genomes_project 17 39234563 39235508 - Abcf1 protein_coding retained_intron MGP_CBAJ_T0047169.1 MGP_CBAJ_G0023367.1 mouse_genomes_project 17 39237594 39240183 - Abcf1 protein_coding retained_intron MGP_CBAJ_T0047170.1 MGP_CBAJ_G0023367.1 mouse_genomes_project 17 39239535 39245273 - MGP_CBAJ_P0047170 Abcf1 protein_coding protein_coding MGP_CBAJ_T0047171.1 MGP_CBAJ_G0023367.1 mouse_genomes_project 17 39240164 39245675 - MGP_CBAJ_P0047171 Abcf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047051.1 MGP_CBAJ_G0023352.1 mouse_genomes_project 17 38851182 38859094 - MGP_CBAJ_P0047051 Dpcr1 protein_coding protein_coding MGP_CBAJ_T0047809.1 MGP_CBAJ_G0023587.1 mouse_genomes_project 17 59197180 59266684 - MGP_CBAJ_P0047809 Efhb protein_coding protein_coding MGP_CBAJ_T0047542.1 MGP_CBAJ_G0023513.1 mouse_genomes_project 17 51158962 51162543 + MGP_CBAJ_P0047542 Dlk2 protein_coding protein_coding MGP_CBAJ_T0047543.1 MGP_CBAJ_G0023513.1 mouse_genomes_project 17 51158962 51164808 + MGP_CBAJ_P0047543 Dlk2 protein_coding protein_coding MGP_CBAJ_T0047544.1 MGP_CBAJ_G0023513.1 mouse_genomes_project 17 51159601 51164815 + MGP_CBAJ_P0047544 Dlk2 protein_coding protein_coding MGP_CBAJ_T0048160.1 MGP_CBAJ_G0023714.1 mouse_genomes_project 17 81303616 81318116 + MGP_CBAJ_P0048160 Ypel5 protein_coding protein_coding MGP_CBAJ_T0046319.1 MGP_CBAJ_G0023179.1 mouse_genomes_project 17 33273173 33337266 + MGP_CBAJ_P0046319 Abcg1 protein_coding protein_coding MGP_CBAJ_T0046320.1 MGP_CBAJ_G0023179.1 mouse_genomes_project 17 33273249 33320241 + Abcg1 protein_coding retained_intron MGP_CBAJ_T0099010.1 MGP_CBAJ_G0037265.1 mouse_genomes_project 17 81481310 81481417 + Gm23649 snRNA snRNA MGP_CBAJ_T0045350.1 MGP_CBAJ_G0022934.1 mouse_genomes_project 17 21782096 21790077 + MGP_CBAJ_P0045350 Zfp983 protein_coding protein_coding MGP_CBAJ_T0047734.1 MGP_CBAJ_G0023569.1 mouse_genomes_project 17 53550801 53566270 + MGP_CBAJ_P0047734 protein_coding protein_coding MGP_CBAJ_T0047735.1 MGP_CBAJ_G0023569.1 mouse_genomes_project 17 53550825 53564771 + MGP_CBAJ_P0047735 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047736.1 MGP_CBAJ_G0023569.1 mouse_genomes_project 17 53551069 53563445 + MGP_CBAJ_P0047736 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048264.1 MGP_CBAJ_G0023753.1 mouse_genomes_project 17 89631067 89698179 + MGP_CBAJ_P0048264 Galm protein_coding protein_coding MGP_CBAJ_T0048265.1 MGP_CBAJ_G0023753.1 mouse_genomes_project 17 89651093 89696117 + MGP_CBAJ_P0048265 Galm protein_coding protein_coding MGP_CBAJ_T0046512.1 MGP_CBAJ_G0023234.1 mouse_genomes_project 17 36200061 36207687 + MGP_CBAJ_P0046512 Pram1 protein_coding protein_coding MGP_CBAJ_T0046513.1 MGP_CBAJ_G0023234.1 mouse_genomes_project 17 36200100 36207681 + MGP_CBAJ_P0046513 Pram1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046514.1 MGP_CBAJ_G0023234.1 mouse_genomes_project 17 36206784 36207610 + Pram1 protein_coding retained_intron MGP_CBAJ_T0046378.1 MGP_CBAJ_G0023192.1 mouse_genomes_project 17 33938355 33950380 - MGP_CBAJ_P0046378 U2af1 protein_coding protein_coding MGP_CBAJ_T0046379.1 MGP_CBAJ_G0023192.1 mouse_genomes_project 17 33938355 33950380 - MGP_CBAJ_P0046379 U2af1 protein_coding protein_coding MGP_CBAJ_T0013090.1 MGP_CBAJ_G0011202.1 mouse_genomes_project 17 42150813 42150943 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013119.1 MGP_CBAJ_G0011231.1 mouse_genomes_project 17 84027022 84027601 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101274.1 MGP_CBAJ_G0039401.1 mouse_genomes_project 17 34405575 34422193 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101275.1 MGP_CBAJ_G0039401.1 mouse_genomes_project 17 34405994 34433090 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101276.1 MGP_CBAJ_G0039401.1 mouse_genomes_project 17 34408299 34442756 - transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0010092.1 MGP_CBAJ_G0008230.1 mouse_genomes_project 17 51454950 51455013 - Mir6976 miRNA miRNA MGP_CBAJ_T0046312.1 MGP_CBAJ_G0023176.1 mouse_genomes_project 17 32677806 33044879 + MGP_CBAJ_P0046312 Dnah8 protein_coding protein_coding MGP_CBAJ_T0046313.1 MGP_CBAJ_G0023176.1 mouse_genomes_project 17 32692651 33044741 + MGP_CBAJ_P0046313 Dnah8 protein_coding unknown_likely_coding MGP_CBAJ_T0010093.1 MGP_CBAJ_G0008231.1 mouse_genomes_project 17 54452089 54452234 - Gm44304 miRNA miRNA MGP_CBAJ_T0048341.1 MGP_CBAJ_G0023790.1 mouse_genomes_project 17 96447617 97004324 + MGP_CBAJ_P0048341 Prkce protein_coding protein_coding MGP_CBAJ_T0048342.1 MGP_CBAJ_G0023790.1 mouse_genomes_project 17 96447651 96457342 + MGP_CBAJ_P0048342 Prkce protein_coding nonsense_mediated_decay MGP_CBAJ_T0048343.1 MGP_CBAJ_G0023790.1 mouse_genomes_project 17 96448006 97001817 + MGP_CBAJ_P0048343 Prkce protein_coding protein_coding MGP_CBAJ_T0048344.1 MGP_CBAJ_G0023790.1 mouse_genomes_project 17 96812798 96818405 + Prkce protein_coding retained_intron MGP_CBAJ_T0048345.1 MGP_CBAJ_G0023790.1 mouse_genomes_project 17 96815586 96818750 + Prkce protein_coding retained_intron MGP_CBAJ_T0013101.1 MGP_CBAJ_G0011213.1 mouse_genomes_project 17 59534065 59534718 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0047811.1 MGP_CBAJ_G0023589.1 mouse_genomes_project 17 59315045 59348266 - MGP_CBAJ_P0047811 Pp2d1 protein_coding protein_coding MGP_CBAJ_T0047356.1 MGP_CBAJ_G0023460.1 mouse_genomes_project 17 44740837 44744861 + MGP_CBAJ_P0047356 Esp4 protein_coding protein_coding MGP_CBAJ_T0006889.1 MGP_CBAJ_G0005663.1 mouse_genomes_project 17 97215747 97216434 + Gm29168 lincRNA lincRNA MGP_CBAJ_T0045384.1 MGP_CBAJ_G0022951.1 mouse_genomes_project 17 23315389 23337032 - MGP_CBAJ_P0045384 Zfp945 protein_coding protein_coding MGP_CBAJ_T0045385.1 MGP_CBAJ_G0022951.1 mouse_genomes_project 17 23317728 23331617 - Zfp945 protein_coding retained_intron MGP_CBAJ_T0045386.1 MGP_CBAJ_G0022951.1 mouse_genomes_project 17 23317728 23337032 - MGP_CBAJ_P0045386 Zfp945 protein_coding protein_coding MGP_CBAJ_T0045387.1 MGP_CBAJ_G0022951.1 mouse_genomes_project 17 23321154 23337001 - MGP_CBAJ_P0045387 Zfp945 protein_coding protein_coding MGP_CBAJ_T0045388.1 MGP_CBAJ_G0022951.1 mouse_genomes_project 17 23331626 23337032 - Zfp945 protein_coding retained_intron MGP_CBAJ_T0048044.1 MGP_CBAJ_G0023686.1 mouse_genomes_project 17 73957978 74088010 - MGP_CBAJ_P0048044 Mtcl1 protein_coding protein_coding MGP_CBAJ_T0048045.1 MGP_CBAJ_G0023686.1 mouse_genomes_project 17 73957982 74088010 - MGP_CBAJ_P0048045 Mtcl1 protein_coding protein_coding MGP_CBAJ_T0048046.1 MGP_CBAJ_G0023686.1 mouse_genomes_project 17 73957984 74012306 - MGP_CBAJ_P0048046 Mtcl1 protein_coding protein_coding MGP_CBAJ_T0048047.1 MGP_CBAJ_G0023686.1 mouse_genomes_project 17 73958674 74077433 - MGP_CBAJ_P0048047 Mtcl1 protein_coding protein_coding MGP_CBAJ_T0048048.1 MGP_CBAJ_G0023686.1 mouse_genomes_project 17 73964922 73967523 - Mtcl1 protein_coding retained_intron MGP_CBAJ_T0048049.1 MGP_CBAJ_G0023686.1 mouse_genomes_project 17 73968943 74005400 - Mtcl1 protein_coding retained_intron MGP_CBAJ_T0048050.1 MGP_CBAJ_G0023686.1 mouse_genomes_project 17 73975169 73989339 - Mtcl1 protein_coding processed_transcript MGP_CBAJ_T0048051.1 MGP_CBAJ_G0023686.1 mouse_genomes_project 17 73975334 74004887 - Mtcl1 protein_coding processed_transcript MGP_CBAJ_T0048052.1 MGP_CBAJ_G0023686.1 mouse_genomes_project 17 73978995 74004501 - Mtcl1 protein_coding retained_intron MGP_CBAJ_T0048053.1 MGP_CBAJ_G0023686.1 mouse_genomes_project 17 73992872 74001085 - Mtcl1 protein_coding processed_transcript MGP_CBAJ_T0048054.1 MGP_CBAJ_G0023686.1 mouse_genomes_project 17 74012127 74086629 - Mtcl1 protein_coding retained_intron MGP_CBAJ_T0047835.1 MGP_CBAJ_G0023602.1 mouse_genomes_project 17 62131242 62147765 - MGP_CBAJ_P0047835 Zfp119b protein_coding protein_coding MGP_CBAJ_T0045783.1 MGP_CBAJ_G0023057.1 mouse_genomes_project 17 26596756 26601542 - MGP_CBAJ_P0045783 Sox8 protein_coding protein_coding MGP_CBAJ_T0045784.1 MGP_CBAJ_G0023057.1 mouse_genomes_project 17 26598842 26601070 - MGP_CBAJ_P0045784 Sox8 protein_coding protein_coding MGP_CBAJ_T0045785.1 MGP_CBAJ_G0023057.1 mouse_genomes_project 17 26599565 26601542 - MGP_CBAJ_P0045785 Sox8 protein_coding protein_coding MGP_CBAJ_T0048241.1 MGP_CBAJ_G0023745.1 mouse_genomes_project 17 88305294 88384763 - MGP_CBAJ_P0048241 Prkd3 protein_coding protein_coding MGP_CBAJ_T0048242.1 MGP_CBAJ_G0023745.1 mouse_genomes_project 17 88305294 88377162 - MGP_CBAJ_P0048242 Prkd3 protein_coding protein_coding MGP_CBAJ_T0048243.1 MGP_CBAJ_G0023745.1 mouse_genomes_project 17 88306431 88384763 - MGP_CBAJ_P0048243 Prkd3 protein_coding protein_coding MGP_CBAJ_T0048244.1 MGP_CBAJ_G0023745.1 mouse_genomes_project 17 88307519 88372511 - MGP_CBAJ_P0048244 Prkd3 protein_coding protein_coding MGP_CBAJ_T0048245.1 MGP_CBAJ_G0023745.1 mouse_genomes_project 17 88325434 88341963 - Prkd3 protein_coding retained_intron MGP_CBAJ_T0048246.1 MGP_CBAJ_G0023745.1 mouse_genomes_project 17 88327365 88341963 - MGP_CBAJ_P0048246 Prkd3 protein_coding protein_coding MGP_CBAJ_T0048247.1 MGP_CBAJ_G0023745.1 mouse_genomes_project 17 88328086 88372694 - Prkd3 protein_coding processed_transcript MGP_CBAJ_T0048248.1 MGP_CBAJ_G0023745.1 mouse_genomes_project 17 88373976 88384724 - Prkd3 protein_coding retained_intron MGP_CBAJ_T0045658.1 MGP_CBAJ_G0023032.1 mouse_genomes_project 17 25827835 25829008 + MGP_CBAJ_P0045658 Mrps34 protein_coding protein_coding MGP_CBAJ_T0045659.1 MGP_CBAJ_G0023032.1 mouse_genomes_project 17 25827842 25830231 + MGP_CBAJ_P0045659 Mrps34 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045660.1 MGP_CBAJ_G0023032.1 mouse_genomes_project 17 25827854 25828835 + Mrps34 protein_coding retained_intron MGP_CBAJ_T0045936.1 MGP_CBAJ_G0023093.1 mouse_genomes_project 17 27343111 27348029 - MGP_CBAJ_P0045936 Arhgdig protein_coding nonsense_mediated_decay MGP_CBAJ_T0045938.1 MGP_CBAJ_G0023093.1 mouse_genomes_project 17 27346068 27348236 - MGP_CBAJ_P0045938 Arhgdig protein_coding protein_coding MGP_CBAJ_T0045939.1 MGP_CBAJ_G0023093.1 mouse_genomes_project 17 27346282 27348255 - MGP_CBAJ_P0045939 Arhgdig protein_coding protein_coding MGP_CBAJ_T0045940.1 MGP_CBAJ_G0023093.1 mouse_genomes_project 17 27346321 27354700 - Arhgdig protein_coding processed_transcript MGP_CBAJ_T0045941.1 MGP_CBAJ_G0023093.1 mouse_genomes_project 17 27346376 27348030 - Arhgdig protein_coding retained_intron MGP_CBAJ_T0046564.1 MGP_CBAJ_G0023243.1 mouse_genomes_project 17 36479998 36517029 - MGP_CBAJ_P0046564 protein_coding protein_coding MGP_CBAJ_T0046565.1 MGP_CBAJ_G0023243.1 mouse_genomes_project 17 36503914 36517086 - protein_coding retained_intron MGP_CBAJ_T0047940.1 MGP_CBAJ_G0023643.1 mouse_genomes_project 17 63344680 63386540 - MGP_CBAJ_P0047940 Acer1 protein_coding protein_coding MGP_CBAJ_T0045841.1 MGP_CBAJ_G0023074.1 mouse_genomes_project 17 26896534 26899364 - MGP_CBAJ_P0045841 Rhbdl1 protein_coding protein_coding MGP_CBAJ_T0045842.1 MGP_CBAJ_G0023074.1 mouse_genomes_project 17 26896671 26899151 - MGP_CBAJ_P0045842 Rhbdl1 protein_coding protein_coding MGP_CBAJ_T0045843.1 MGP_CBAJ_G0023074.1 mouse_genomes_project 17 26897841 26899320 - MGP_CBAJ_P0045843 Rhbdl1 protein_coding protein_coding MGP_CBAJ_T0013078.1 MGP_CBAJ_G0011190.1 mouse_genomes_project 17 39904735 39905728 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0048255.1 MGP_CBAJ_G0023751.1 mouse_genomes_project 17 89308311 89364391 - MGP_CBAJ_P0048255 Atl2 protein_coding protein_coding MGP_CBAJ_T0048256.1 MGP_CBAJ_G0023751.1 mouse_genomes_project 17 89310605 89364389 - MGP_CBAJ_P0048256 Atl2 protein_coding protein_coding MGP_CBAJ_T0100246.1 MGP_CBAJ_G0038501.1 mouse_genomes_project 17 25637526 25637654 - Snora78 snoRNA snoRNA MGP_CBAJ_T0046453.1 MGP_CBAJ_G0023213.1 mouse_genomes_project 17 35399654 35410139 - MGP_CBAJ_P0046453 Zfp870 protein_coding protein_coding MGP_CBAJ_T0013058.1 MGP_CBAJ_G0011170.1 mouse_genomes_project 17 34264470 34264890 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0101746.1 MGP_CBAJ_G0039777.1 mouse_genomes_project 17 40439961 40442156 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0048271.1 MGP_CBAJ_G0023757.1 mouse_genomes_project 17 89769787 89829364 - MGP_CBAJ_P0048271 Dhx57 protein_coding protein_coding MGP_CBAJ_T0048272.1 MGP_CBAJ_G0023757.1 mouse_genomes_project 17 89770270 89828736 - MGP_CBAJ_P0048272 Dhx57 protein_coding unknown_likely_coding MGP_CBAJ_T0046712.1 MGP_CBAJ_G0023277.1 mouse_genomes_project 17 37170060 37192806 + BC051142 protein_coding processed_transcript MGP_CBAJ_T0046713.1 MGP_CBAJ_G0023277.1 mouse_genomes_project 17 37170060 37235601 + MGP_CBAJ_P0046713 BC051142 protein_coding protein_coding MGP_CBAJ_T0046714.1 MGP_CBAJ_G0023277.1 mouse_genomes_project 17 37170060 37220326 + MGP_CBAJ_P0046714 BC051142 protein_coding protein_coding MGP_CBAJ_T0046715.1 MGP_CBAJ_G0023277.1 mouse_genomes_project 17 37170061 37195912 + BC051142 protein_coding retained_intron MGP_CBAJ_T0046716.1 MGP_CBAJ_G0023277.1 mouse_genomes_project 17 37170080 37235601 + MGP_CBAJ_P0046716 BC051142 protein_coding protein_coding MGP_CBAJ_T0046717.1 MGP_CBAJ_G0023277.1 mouse_genomes_project 17 37192123 37235602 + MGP_CBAJ_P0046717 BC051142 protein_coding protein_coding MGP_CBAJ_T0046718.1 MGP_CBAJ_G0023277.1 mouse_genomes_project 17 37192190 37214671 + MGP_CBAJ_P0046718 BC051142 protein_coding protein_coding MGP_CBAJ_T0046719.1 MGP_CBAJ_G0023277.1 mouse_genomes_project 17 37192801 37210902 + BC051142 protein_coding processed_transcript MGP_CBAJ_T0046720.1 MGP_CBAJ_G0023277.1 mouse_genomes_project 17 37192823 37196669 + MGP_CBAJ_P0046720 BC051142 protein_coding protein_coding MGP_CBAJ_T0047725.1 MGP_CBAJ_G0023566.1 mouse_genomes_project 17 53464020 53479374 + MGP_CBAJ_P0047725 Trem3 protein_coding protein_coding MGP_CBAJ_T0046919.1 MGP_CBAJ_G0023315.1 mouse_genomes_project 17 38042923 38045892 + MGP_CBAJ_P0046919 Ddah2 protein_coding protein_coding MGP_CBAJ_T0046920.1 MGP_CBAJ_G0023315.1 mouse_genomes_project 17 38043612 38044703 + MGP_CBAJ_P0046920 Ddah2 protein_coding protein_coding MGP_CBAJ_T0046921.1 MGP_CBAJ_G0023315.1 mouse_genomes_project 17 38044689 38045422 + Ddah2 protein_coding retained_intron MGP_CBAJ_T0048106.1 MGP_CBAJ_G0023700.1 mouse_genomes_project 17 79249119 79265880 - MGP_CBAJ_P0048106 Myl12b protein_coding protein_coding MGP_CBAJ_T0048107.1 MGP_CBAJ_G0023700.1 mouse_genomes_project 17 79249470 79251166 - Myl12b protein_coding retained_intron MGP_CBAJ_T0048108.1 MGP_CBAJ_G0023700.1 mouse_genomes_project 17 79252117 79265623 - Myl12b protein_coding retained_intron MGP_CBAJ_T0100269.1 MGP_CBAJ_G0038524.1 mouse_genomes_project 17 97466464 97466596 - Gm24648 snoRNA snoRNA MGP_CBAJ_T0010086.1 MGP_CBAJ_G0008224.1 mouse_genomes_project 17 38252927 38252988 + Mir6975 miRNA miRNA MGP_CBAJ_T0045151.1 MGP_CBAJ_G0022848.1 mouse_genomes_project 17 10790589 10834351 + MGP_CBAJ_P0045151 Plg protein_coding protein_coding MGP_CBAJ_T0011292.1 MGP_CBAJ_G0009430.1 mouse_genomes_project 17 11245565 11245817 + Gm23833 misc_RNA misc_RNA MGP_CBAJ_T0045058.1 MGP_CBAJ_G0022816.1 mouse_genomes_project 17 4715559 4797065 + MGP_CBAJ_P0045058 protein_coding protein_coding MGP_CBAJ_T0048132.1 MGP_CBAJ_G0023704.1 mouse_genomes_project 17 79550499 79617838 - MGP_CBAJ_P0048132 Emilin2 protein_coding protein_coding MGP_CBAJ_T0047483.1 MGP_CBAJ_G0023502.1 mouse_genomes_project 17 50840514 50859061 - MGP_CBAJ_P0047483 Vegfa protein_coding protein_coding MGP_CBAJ_T0047484.1 MGP_CBAJ_G0023502.1 mouse_genomes_project 17 50840514 50859615 - MGP_CBAJ_P0047484 Vegfa protein_coding protein_coding MGP_CBAJ_T0047485.1 MGP_CBAJ_G0023502.1 mouse_genomes_project 17 50840517 50859623 - MGP_CBAJ_P0047485 Vegfa protein_coding protein_coding MGP_CBAJ_T0047486.1 MGP_CBAJ_G0023502.1 mouse_genomes_project 17 50845723 50852109 - Vegfa protein_coding retained_intron MGP_CBAJ_T0047487.1 MGP_CBAJ_G0023502.1 mouse_genomes_project 17 50845787 50859615 - MGP_CBAJ_P0047487 Vegfa protein_coding protein_coding MGP_CBAJ_T0047488.1 MGP_CBAJ_G0023502.1 mouse_genomes_project 17 50845850 50852126 - Vegfa protein_coding retained_intron MGP_CBAJ_T0047489.1 MGP_CBAJ_G0023502.1 mouse_genomes_project 17 50845956 50848617 - Vegfa protein_coding retained_intron MGP_CBAJ_T0047490.1 MGP_CBAJ_G0023502.1 mouse_genomes_project 17 50846075 50858602 - MGP_CBAJ_P0047490 Vegfa protein_coding protein_coding MGP_CBAJ_T0047491.1 MGP_CBAJ_G0023502.1 mouse_genomes_project 17 50846077 50852047 - Vegfa protein_coding retained_intron MGP_CBAJ_T0047492.1 MGP_CBAJ_G0023502.1 mouse_genomes_project 17 50846102 50858602 - MGP_CBAJ_P0047492 Vegfa protein_coding protein_coding MGP_CBAJ_T0047493.1 MGP_CBAJ_G0023502.1 mouse_genomes_project 17 50852440 50858602 - Vegfa protein_coding retained_intron MGP_CBAJ_T0010051.1 MGP_CBAJ_G0008189.1 mouse_genomes_project 17 17192804 17192897 + Mirlet7e miRNA miRNA MGP_CBAJ_T0006888.1 MGP_CBAJ_G0005662.1 mouse_genomes_project 17 96024802 96057317 - Gm29418 lincRNA lincRNA MGP_CBAJ_T0048073.1 MGP_CBAJ_G0023695.1 mouse_genomes_project 17 77150947 77301141 + MGP_CBAJ_P0048073 Epb41l3 protein_coding protein_coding MGP_CBAJ_T0048074.1 MGP_CBAJ_G0023695.1 mouse_genomes_project 17 77150947 77301141 + MGP_CBAJ_P0048074 Epb41l3 protein_coding protein_coding MGP_CBAJ_T0048075.1 MGP_CBAJ_G0023695.1 mouse_genomes_project 17 77205684 77301147 + MGP_CBAJ_P0048075 Epb41l3 protein_coding unknown_likely_coding MGP_CBAJ_T0047303.1 MGP_CBAJ_G0023415.1 mouse_genomes_project 17 41033979 41035017 + MGP_CBAJ_P0047303 protein_coding protein_coding MGP_CBAJ_T0011312.1 MGP_CBAJ_G0009450.1 mouse_genomes_project 17 95799129 95799203 + Gm27610 misc_RNA misc_RNA MGP_CBAJ_T0045461.1 MGP_CBAJ_G0022977.1 mouse_genomes_project 17 24579982 24593337 + Prss32 protein_coding processed_transcript MGP_CBAJ_T0045462.1 MGP_CBAJ_G0022977.1 mouse_genomes_project 17 24592416 24598591 + MGP_CBAJ_P0045462 Prss32 protein_coding protein_coding MGP_CBAJ_T0045463.1 MGP_CBAJ_G0022977.1 mouse_genomes_project 17 24592659 24598151 + MGP_CBAJ_P0045463 Prss32 protein_coding nonsense_mediated_decay MGP_CBAJ_T0099000.1 MGP_CBAJ_G0037255.1 mouse_genomes_project 17 51090659 51090766 - Gm22474 snRNA snRNA MGP_CBAJ_T0003659.1 MGP_CBAJ_G0003298.1 mouse_genomes_project 17 30532681 30537026 - Pnpla1os antisense antisense MGP_CBAJ_T0045555.1 MGP_CBAJ_G0023003.1 mouse_genomes_project 17 25339881 25345401 - MGP_CBAJ_P0045555 Mlst8 protein_coding protein_coding MGP_CBAJ_T0045556.1 MGP_CBAJ_G0023003.1 mouse_genomes_project 17 25339881 25345401 - MGP_CBAJ_P0045556 Mlst8 protein_coding protein_coding MGP_CBAJ_T0046959.1 MGP_CBAJ_G0023326.1 mouse_genomes_project 17 38118034 38118572 + D17H6S53E protein_coding retained_intron MGP_CBAJ_T0046960.1 MGP_CBAJ_G0023326.1 mouse_genomes_project 17 38118047 38119855 + MGP_CBAJ_P0046960 D17H6S53E protein_coding protein_coding MGP_CBAJ_T0006802.1 MGP_CBAJ_G0005597.1 mouse_genomes_project 17 14265507 14272654 + A930024N18Rik lincRNA lincRNA MGP_CBAJ_T0047564.1 MGP_CBAJ_G0023517.1 mouse_genomes_project 17 51318534 51325480 - MGP_CBAJ_P0047564 Slc22a7 protein_coding protein_coding MGP_CBAJ_T0003653.1 MGP_CBAJ_G0003292.1 mouse_genomes_project 17 27773554 27781698 - 1700049J03Rik antisense antisense MGP_CBAJ_T0047292.1 MGP_CBAJ_G0023405.1 mouse_genomes_project 17 40745494 40746799 - MGP_CBAJ_P0047292 Olfr94 protein_coding protein_coding MGP_CBAJ_T0011302.1 MGP_CBAJ_G0009440.1 mouse_genomes_project 17 51286020 51286344 + Gm23037 misc_RNA misc_RNA MGP_CBAJ_T0045168.1 MGP_CBAJ_G0022855.1 mouse_genomes_project 17 11377084 11398056 - MGP_CBAJ_P0045168 Pnldc1 protein_coding protein_coding MGP_CBAJ_T0048366.1 MGP_CBAJ_G0023800.1 mouse_genomes_project 17 97738732 97839580 + MGP_CBAJ_P0048366 Ttc7 protein_coding protein_coding MGP_CBAJ_T0048367.1 MGP_CBAJ_G0023800.1 mouse_genomes_project 17 97738739 97748780 + Ttc7 protein_coding processed_transcript MGP_CBAJ_T0048368.1 MGP_CBAJ_G0023800.1 mouse_genomes_project 17 97738751 97830090 + MGP_CBAJ_P0048368 Ttc7 protein_coding protein_coding MGP_CBAJ_T0048369.1 MGP_CBAJ_G0023800.1 mouse_genomes_project 17 97738797 97820111 + MGP_CBAJ_P0048369 Ttc7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048370.1 MGP_CBAJ_G0023800.1 mouse_genomes_project 17 97748661 97837897 + MGP_CBAJ_P0048370 Ttc7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048371.1 MGP_CBAJ_G0023800.1 mouse_genomes_project 17 97764346 97788285 + Ttc7 protein_coding processed_transcript MGP_CBAJ_T0048372.1 MGP_CBAJ_G0023800.1 mouse_genomes_project 17 97778525 97792477 + Ttc7 protein_coding retained_intron MGP_CBAJ_T0048373.1 MGP_CBAJ_G0023800.1 mouse_genomes_project 17 97788421 97798153 + Ttc7 protein_coding processed_transcript MGP_CBAJ_T0048374.1 MGP_CBAJ_G0023800.1 mouse_genomes_project 17 97836663 97839580 + Ttc7 protein_coding processed_transcript MGP_CBAJ_T0013048.1 MGP_CBAJ_G0011160.1 mouse_genomes_project 17 23195943 23196361 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013051.1 MGP_CBAJ_G0011163.1 mouse_genomes_project 17 24155698 24156018 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0046446.1 MGP_CBAJ_G0023211.1 mouse_genomes_project 17 35302020 35319927 - MGP_CBAJ_P0046446 Zfp811 protein_coding protein_coding MGP_CBAJ_T0046447.1 MGP_CBAJ_G0023211.1 mouse_genomes_project 17 35306099 35309631 - MGP_CBAJ_P0046447 Zfp811 protein_coding protein_coding MGP_CBAJ_T0010069.1 MGP_CBAJ_G0008207.1 mouse_genomes_project 17 28687687 28687763 + Mir7216 miRNA miRNA MGP_CBAJ_T0047111.1 MGP_CBAJ_G0023361.1 mouse_genomes_project 17 39120377 39130357 + MGP_CBAJ_P0047111 Ppp1r18 protein_coding protein_coding MGP_CBAJ_T0047112.1 MGP_CBAJ_G0023361.1 mouse_genomes_project 17 39120409 39130258 + MGP_CBAJ_P0047112 Ppp1r18 protein_coding protein_coding MGP_CBAJ_T0047113.1 MGP_CBAJ_G0023361.1 mouse_genomes_project 17 39120840 39130362 + MGP_CBAJ_P0047113 Ppp1r18 protein_coding protein_coding MGP_CBAJ_T0047114.1 MGP_CBAJ_G0023361.1 mouse_genomes_project 17 39121399 39130363 + MGP_CBAJ_P0047114 Ppp1r18 protein_coding protein_coding MGP_CBAJ_T0047115.1 MGP_CBAJ_G0023361.1 mouse_genomes_project 17 39121444 39130353 + MGP_CBAJ_P0047115 Ppp1r18 protein_coding protein_coding MGP_CBAJ_T0047116.1 MGP_CBAJ_G0023361.1 mouse_genomes_project 17 39123187 39130360 + MGP_CBAJ_P0047116 Ppp1r18 protein_coding protein_coding MGP_CBAJ_T0047967.1 MGP_CBAJ_G0023658.1 mouse_genomes_project 17 63662062 63689043 - MGP_CBAJ_P0047967 C3 protein_coding protein_coding MGP_CBAJ_T0047968.1 MGP_CBAJ_G0023658.1 mouse_genomes_project 17 63662099 63683747 - MGP_CBAJ_P0047968 C3 protein_coding protein_coding MGP_CBAJ_T0047969.1 MGP_CBAJ_G0023658.1 mouse_genomes_project 17 63664309 63688910 - MGP_CBAJ_P0047969 C3 protein_coding protein_coding MGP_CBAJ_T0047970.1 MGP_CBAJ_G0023658.1 mouse_genomes_project 17 63676588 63680820 - C3 protein_coding processed_transcript MGP_CBAJ_T0045194.1 MGP_CBAJ_G0022863.1 mouse_genomes_project 17 12113621 12208400 - Tcte2 protein_coding processed_transcript MGP_CBAJ_T0045195.1 MGP_CBAJ_G0022863.1 mouse_genomes_project 17 12115651 12429090 - Tcte2 protein_coding processed_transcript MGP_CBAJ_T0045196.1 MGP_CBAJ_G0022863.1 mouse_genomes_project 17 12115651 12323747 - Tcte2 protein_coding processed_transcript MGP_CBAJ_T0045197.1 MGP_CBAJ_G0022863.1 mouse_genomes_project 17 12371621 12429090 - MGP_CBAJ_P0045197 Tcte2 protein_coding protein_coding MGP_CBAJ_T0045198.1 MGP_CBAJ_G0022863.1 mouse_genomes_project 17 12371627 12429114 - MGP_CBAJ_P0045198 Tcte2 protein_coding protein_coding MGP_CBAJ_T0045199.1 MGP_CBAJ_G0022863.1 mouse_genomes_project 17 12373208 12429079 - MGP_CBAJ_P0045199 Tcte2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045200.1 MGP_CBAJ_G0022863.1 mouse_genomes_project 17 12373226 12394641 - MGP_CBAJ_P0045200 Tcte2 protein_coding protein_coding MGP_CBAJ_T0045201.1 MGP_CBAJ_G0022863.1 mouse_genomes_project 17 12375613 12429098 - MGP_CBAJ_P0045201 Tcte2 protein_coding protein_coding MGP_CBAJ_T0045202.1 MGP_CBAJ_G0022863.1 mouse_genomes_project 17 12375613 12429313 - MGP_CBAJ_P0045202 Tcte2 protein_coding protein_coding MGP_CBAJ_T0045203.1 MGP_CBAJ_G0022863.1 mouse_genomes_project 17 12375613 12429537 - MGP_CBAJ_P0045203 Tcte2 protein_coding protein_coding MGP_CBAJ_T0047150.1 MGP_CBAJ_G0023365.1 mouse_genomes_project 17 39170074 39176089 - MGP_CBAJ_P0047150 Mrps18b protein_coding protein_coding MGP_CBAJ_T0047151.1 MGP_CBAJ_G0023365.1 mouse_genomes_project 17 39170074 39176089 - MGP_CBAJ_P0047151 Mrps18b protein_coding protein_coding MGP_CBAJ_T0047152.1 MGP_CBAJ_G0023365.1 mouse_genomes_project 17 39170081 39176030 - MGP_CBAJ_P0047152 Mrps18b protein_coding protein_coding MGP_CBAJ_T0047153.1 MGP_CBAJ_G0023365.1 mouse_genomes_project 17 39170198 39172263 - Mrps18b protein_coding retained_intron MGP_CBAJ_T0047154.1 MGP_CBAJ_G0023365.1 mouse_genomes_project 17 39170546 39176037 - MGP_CBAJ_P0047154 Mrps18b protein_coding protein_coding MGP_CBAJ_T0047155.1 MGP_CBAJ_G0023365.1 mouse_genomes_project 17 39171136 39176023 - MGP_CBAJ_P0047155 Mrps18b protein_coding protein_coding MGP_CBAJ_T0047156.1 MGP_CBAJ_G0023365.1 mouse_genomes_project 17 39173487 39176077 - Mrps18b protein_coding retained_intron MGP_CBAJ_T0047157.1 MGP_CBAJ_G0023365.1 mouse_genomes_project 17 39174259 39175903 - Mrps18b protein_coding processed_transcript MGP_CBAJ_T0046768.1 MGP_CBAJ_G0023286.1 mouse_genomes_project 17 37541728 37543700 - Egfl8 protein_coding retained_intron MGP_CBAJ_T0046769.1 MGP_CBAJ_G0023286.1 mouse_genomes_project 17 37541729 37544351 - MGP_CBAJ_P0046769 Egfl8 protein_coding protein_coding MGP_CBAJ_T0046770.1 MGP_CBAJ_G0023286.1 mouse_genomes_project 17 37541733 37544351 - MGP_CBAJ_P0046770 Egfl8 protein_coding protein_coding MGP_CBAJ_T0046771.1 MGP_CBAJ_G0023286.1 mouse_genomes_project 17 37542156 37544168 - MGP_CBAJ_P0046771 Egfl8 protein_coding protein_coding MGP_CBAJ_T0046772.1 MGP_CBAJ_G0023286.1 mouse_genomes_project 17 37542543 37544336 - Egfl8 protein_coding retained_intron MGP_CBAJ_T0046773.1 MGP_CBAJ_G0023286.1 mouse_genomes_project 17 37543148 37543701 - Egfl8 protein_coding retained_intron MGP_CBAJ_T0013050.1 MGP_CBAJ_G0011162.1 mouse_genomes_project 17 24155696 24156019 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0048221.1 MGP_CBAJ_G0023735.1 mouse_genomes_project 17 87853597 87963954 + MGP_CBAJ_P0048221 Vit protein_coding protein_coding MGP_CBAJ_T0046384.1 MGP_CBAJ_G0023196.1 mouse_genomes_project 17 34361034 34387800 + MGP_CBAJ_P0046384 Rrp1b protein_coding protein_coding MGP_CBAJ_T0046385.1 MGP_CBAJ_G0023196.1 mouse_genomes_project 17 34361337 34372854 + Rrp1b protein_coding retained_intron MGP_CBAJ_T0046386.1 MGP_CBAJ_G0023196.1 mouse_genomes_project 17 34361363 34372847 + MGP_CBAJ_P0046386 Rrp1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0046387.1 MGP_CBAJ_G0023196.1 mouse_genomes_project 17 34373216 34387791 + Rrp1b protein_coding retained_intron MGP_CBAJ_T0046388.1 MGP_CBAJ_G0023196.1 mouse_genomes_project 17 34373738 34376708 + Rrp1b protein_coding retained_intron MGP_CBAJ_T0046389.1 MGP_CBAJ_G0023196.1 mouse_genomes_project 17 34374956 34376587 + Rrp1b protein_coding retained_intron MGP_CBAJ_T0046390.1 MGP_CBAJ_G0023196.1 mouse_genomes_project 17 34376711 34381525 + MGP_CBAJ_P0046390 Rrp1b protein_coding nonsense_mediated_decay MGP_CBAJ_T0046391.1 MGP_CBAJ_G0023196.1 mouse_genomes_project 17 34377179 34381538 + Rrp1b protein_coding retained_intron MGP_CBAJ_T0046392.1 MGP_CBAJ_G0023196.1 mouse_genomes_project 17 34380841 34381954 + Rrp1b protein_coding processed_transcript MGP_CBAJ_T0046393.1 MGP_CBAJ_G0023196.1 mouse_genomes_project 17 34383211 34385496 + Rrp1b protein_coding retained_intron MGP_CBAJ_T0046394.1 MGP_CBAJ_G0023196.1 mouse_genomes_project 17 34384090 34385589 + Rrp1b protein_coding retained_intron MGP_CBAJ_T0045327.1 MGP_CBAJ_G0022921.1 mouse_genomes_project 17 20985144 21005760 + MGP_CBAJ_P0045327 Ppp2r1a protein_coding protein_coding MGP_CBAJ_T0045328.1 MGP_CBAJ_G0022921.1 mouse_genomes_project 17 20985320 20998613 + MGP_CBAJ_P0045328 Ppp2r1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0045329.1 MGP_CBAJ_G0022921.1 mouse_genomes_project 17 20996402 20998666 + Ppp2r1a protein_coding retained_intron MGP_CBAJ_T0045330.1 MGP_CBAJ_G0022921.1 mouse_genomes_project 17 20996603 20999338 + MGP_CBAJ_P0045330 Ppp2r1a protein_coding protein_coding MGP_CBAJ_T0045331.1 MGP_CBAJ_G0022921.1 mouse_genomes_project 17 20998569 21000427 + Ppp2r1a protein_coding retained_intron MGP_CBAJ_T0045332.1 MGP_CBAJ_G0022921.1 mouse_genomes_project 17 20998817 21001772 + Ppp2r1a protein_coding retained_intron MGP_CBAJ_T0045333.1 MGP_CBAJ_G0022921.1 mouse_genomes_project 17 21000318 21001095 + Ppp2r1a protein_coding retained_intron MGP_CBAJ_T0045060.1 MGP_CBAJ_G0022818.1 mouse_genomes_project 17 4890186 5039346 + MGP_CBAJ_P0045060 Rps6ka2 protein_coding unknown_likely_coding MGP_CBAJ_T0047313.1 MGP_CBAJ_G0023423.1 mouse_genomes_project 17 41231077 41253080 - MGP_CBAJ_P0047313 protein_coding protein_coding MGP_CBAJ_T0013116.1 MGP_CBAJ_G0011228.1 mouse_genomes_project 17 78495542 78495986 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0047531.1 MGP_CBAJ_G0023510.1 mouse_genomes_project 17 51105633 51110091 + MGP_CBAJ_P0047531 Yipf3 protein_coding protein_coding MGP_CBAJ_T0047532.1 MGP_CBAJ_G0023510.1 mouse_genomes_project 17 51105678 51109042 + MGP_CBAJ_P0047532 Yipf3 protein_coding protein_coding MGP_CBAJ_T0047533.1 MGP_CBAJ_G0023510.1 mouse_genomes_project 17 51105698 51109555 + Yipf3 protein_coding retained_intron MGP_CBAJ_T0047534.1 MGP_CBAJ_G0023510.1 mouse_genomes_project 17 51106582 51109458 + MGP_CBAJ_P0047534 Yipf3 protein_coding protein_coding MGP_CBAJ_T0047535.1 MGP_CBAJ_G0023510.1 mouse_genomes_project 17 51107642 51108547 + Yipf3 protein_coding processed_transcript MGP_CBAJ_T0047536.1 MGP_CBAJ_G0023510.1 mouse_genomes_project 17 51108894 51109571 + Yipf3 protein_coding processed_transcript MGP_CBAJ_T0006871.1 MGP_CBAJ_G0005650.1 mouse_genomes_project 17 71968904 72014198 - AU016765 lincRNA lincRNA MGP_CBAJ_T0006872.1 MGP_CBAJ_G0005650.1 mouse_genomes_project 17 71968957 72014156 - AU016765 lincRNA lincRNA MGP_CBAJ_T0006873.1 MGP_CBAJ_G0005650.1 mouse_genomes_project 17 71968960 72014236 - AU016765 lincRNA lincRNA MGP_CBAJ_T0006874.1 MGP_CBAJ_G0005650.1 mouse_genomes_project 17 71968962 72014079 - AU016765 lincRNA lincRNA MGP_CBAJ_T0045217.1 MGP_CBAJ_G0022868.1 mouse_genomes_project 17 13464457 13493039 - MGP_CBAJ_P0045217 Thbs2 protein_coding protein_coding MGP_CBAJ_T0046046.1 MGP_CBAJ_G0023120.1 mouse_genomes_project 17 28953691 28955849 - MGP_CBAJ_P0046046 AI413582 protein_coding protein_coding MGP_CBAJ_T0046047.1 MGP_CBAJ_G0023120.1 mouse_genomes_project 17 28953887 28955825 - MGP_CBAJ_P0046047 AI413582 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046048.1 MGP_CBAJ_G0023120.1 mouse_genomes_project 17 28953889 28955866 - AI413582 protein_coding retained_intron MGP_CBAJ_T0046049.1 MGP_CBAJ_G0023120.1 mouse_genomes_project 17 28954798 28955784 - AI413582 protein_coding processed_transcript MGP_CBAJ_T0045320.1 MGP_CBAJ_G0022914.1 mouse_genomes_project 17 20657350 20658382 - MGP_CBAJ_P0045320 Fpr-rs3 protein_coding protein_coding MGP_CBAJ_T0100251.1 MGP_CBAJ_G0038506.1 mouse_genomes_project 17 37919143 37919206 - Gm25744 snoRNA snoRNA MGP_CBAJ_T0047482.1 MGP_CBAJ_G0023501.1 mouse_genomes_project 17 50511081 50512062 - MGP_CBAJ_P0047482 1600014C23Rik protein_coding protein_coding MGP_CBAJ_T0047726.1 MGP_CBAJ_G0023567.1 mouse_genomes_project 17 53484826 53495889 + MGP_CBAJ_P0047726 Treml4 protein_coding protein_coding MGP_CBAJ_T0047727.1 MGP_CBAJ_G0023567.1 mouse_genomes_project 17 53484868 53495022 + MGP_CBAJ_P0047727 Treml4 protein_coding protein_coding MGP_CBAJ_T0047728.1 MGP_CBAJ_G0023567.1 mouse_genomes_project 17 53484868 53495022 + MGP_CBAJ_P0047728 Treml4 protein_coding protein_coding MGP_CBAJ_T0047729.1 MGP_CBAJ_G0023567.1 mouse_genomes_project 17 53484872 53495195 + MGP_CBAJ_P0047729 Treml4 protein_coding protein_coding MGP_CBAJ_T0047730.1 MGP_CBAJ_G0023567.1 mouse_genomes_project 17 53484904 53495029 + MGP_CBAJ_P0047730 Treml4 protein_coding protein_coding MGP_CBAJ_T0047731.1 MGP_CBAJ_G0023567.1 mouse_genomes_project 17 53492967 53495041 + Treml4 protein_coding retained_intron MGP_CBAJ_T0048281.1 MGP_CBAJ_G0023763.1 mouse_genomes_project 17 90177399 90339858 - MGP_CBAJ_P0048281 Map4k3 protein_coding unknown_likely_coding MGP_CBAJ_T0048282.1 MGP_CBAJ_G0023763.1 mouse_genomes_project 17 90177402 90340062 - MGP_CBAJ_P0048282 Map4k3 protein_coding protein_coding MGP_CBAJ_T0048283.1 MGP_CBAJ_G0023763.1 mouse_genomes_project 17 90177402 90340062 - MGP_CBAJ_P0048283 Map4k3 protein_coding protein_coding MGP_CBAJ_T0046268.1 MGP_CBAJ_G0023164.1 mouse_genomes_project 17 31322084 31327032 + MGP_CBAJ_P0046268 Pim1 protein_coding protein_coding MGP_CBAJ_T0047172.1 MGP_CBAJ_G0023368.1 mouse_genomes_project 17 39248453 39258920 - MGP_CBAJ_P0047172 Prr3 protein_coding protein_coding MGP_CBAJ_T0047173.1 MGP_CBAJ_G0023368.1 mouse_genomes_project 17 39252875 39258334 - MGP_CBAJ_P0047173 Prr3 protein_coding protein_coding MGP_CBAJ_T0047174.1 MGP_CBAJ_G0023368.1 mouse_genomes_project 17 39256567 39258256 - MGP_CBAJ_P0047174 Prr3 protein_coding protein_coding MGP_CBAJ_T0047175.1 MGP_CBAJ_G0023368.1 mouse_genomes_project 17 39256803 39258616 - MGP_CBAJ_P0047175 Prr3 protein_coding protein_coding MGP_CBAJ_T0047176.1 MGP_CBAJ_G0023368.1 mouse_genomes_project 17 39256971 39258616 - MGP_CBAJ_P0047176 Prr3 protein_coding protein_coding MGP_CBAJ_T0047177.1 MGP_CBAJ_G0023368.1 mouse_genomes_project 17 39257226 39258487 - MGP_CBAJ_P0047177 Prr3 protein_coding protein_coding MGP_CBAJ_T0047178.1 MGP_CBAJ_G0023368.1 mouse_genomes_project 17 39257337 39258107 - Prr3 protein_coding retained_intron MGP_CBAJ_T0047890.1 MGP_CBAJ_G0023625.1 mouse_genomes_project 17 62716033 62772295 - MGP_CBAJ_P0047890 Ptprs protein_coding protein_coding MGP_CBAJ_T0047891.1 MGP_CBAJ_G0023625.1 mouse_genomes_project 17 62716035 62789369 - MGP_CBAJ_P0047891 Ptprs protein_coding protein_coding MGP_CBAJ_T0047892.1 MGP_CBAJ_G0023625.1 mouse_genomes_project 17 62725839 62789255 - Ptprs protein_coding processed_transcript MGP_CBAJ_T0046786.1 MGP_CBAJ_G0023289.1 mouse_genomes_project 17 37573048 37574609 + MGP_CBAJ_P0046786 Fkbpl protein_coding protein_coding MGP_CBAJ_T0046787.1 MGP_CBAJ_G0023289.1 mouse_genomes_project 17 37573125 37573607 + MGP_CBAJ_P0046787 Fkbpl protein_coding protein_coding MGP_CBAJ_T0047370.1 MGP_CBAJ_G0023469.1 mouse_genomes_project 17 46933965 46994127 - MGP_CBAJ_P0047370 Opn5 protein_coding protein_coding MGP_CBAJ_T0045169.1 MGP_CBAJ_G0022856.1 mouse_genomes_project 17 11399577 11407063 - MGP_CBAJ_P0045169 Mrpl18 protein_coding protein_coding MGP_CBAJ_T0045170.1 MGP_CBAJ_G0022856.1 mouse_genomes_project 17 11402073 11406342 - Mrpl18 protein_coding processed_transcript MGP_CBAJ_T0045171.1 MGP_CBAJ_G0022856.1 mouse_genomes_project 17 11402299 11406821 - Mrpl18 protein_coding retained_intron MGP_CBAJ_T0045172.1 MGP_CBAJ_G0022856.1 mouse_genomes_project 17 11402343 11406920 - Mrpl18 protein_coding processed_transcript MGP_CBAJ_T0045173.1 MGP_CBAJ_G0022856.1 mouse_genomes_project 17 11406219 11406787 - Mrpl18 protein_coding retained_intron MGP_CBAJ_T0045183.1 MGP_CBAJ_G0022858.1 mouse_genomes_project 17 11417906 11441352 - protein_coding retained_intron MGP_CBAJ_T0045186.1 MGP_CBAJ_G0022858.1 mouse_genomes_project 17 11440752 11468839 - MGP_CBAJ_P0045186 protein_coding protein_coding MGP_CBAJ_T0047923.1 MGP_CBAJ_G0023630.1 mouse_genomes_project 17 62948849 62950307 + MGP_CBAJ_P0047923 Rpl36 protein_coding protein_coding MGP_CBAJ_T0046992.1 MGP_CBAJ_G0023332.1 mouse_genomes_project 17 38201278 38203155 + MGP_CBAJ_P0046992 Ltb protein_coding protein_coding MGP_CBAJ_T0046993.1 MGP_CBAJ_G0023332.1 mouse_genomes_project 17 38201362 38203158 + Ltb protein_coding retained_intron MGP_CBAJ_T0046994.1 MGP_CBAJ_G0023332.1 mouse_genomes_project 17 38201465 38203173 + MGP_CBAJ_P0046994 Ltb protein_coding protein_coding MGP_CBAJ_T0011313.1 MGP_CBAJ_G0009451.1 mouse_genomes_project 17 95799427 95799750 + Gm27283 misc_RNA misc_RNA MGP_CBAJ_T0045699.1 MGP_CBAJ_G0023037.1 mouse_genomes_project 17 26057373 26076522 - MGP_CBAJ_P0045699 Telo2 protein_coding unknown_likely_coding MGP_CBAJ_T0045700.1 MGP_CBAJ_G0023037.1 mouse_genomes_project 17 26057375 26076654 - Telo2 protein_coding retained_intron MGP_CBAJ_T0045701.1 MGP_CBAJ_G0023037.1 mouse_genomes_project 17 26057375 26076714 - MGP_CBAJ_P0045701 Telo2 protein_coding protein_coding MGP_CBAJ_T0045702.1 MGP_CBAJ_G0023037.1 mouse_genomes_project 17 26057382 26076652 - MGP_CBAJ_P0045702 Telo2 protein_coding protein_coding MGP_CBAJ_T0045703.1 MGP_CBAJ_G0023037.1 mouse_genomes_project 17 26057422 26061457 - Telo2 protein_coding processed_transcript MGP_CBAJ_T0045704.1 MGP_CBAJ_G0023037.1 mouse_genomes_project 17 26057430 26067526 - Telo2 protein_coding processed_transcript MGP_CBAJ_T0045705.1 MGP_CBAJ_G0023037.1 mouse_genomes_project 17 26057629 26059241 - Telo2 protein_coding processed_transcript MGP_CBAJ_T0045706.1 MGP_CBAJ_G0023037.1 mouse_genomes_project 17 26058571 26068822 - Telo2 protein_coding retained_intron MGP_CBAJ_T0045707.1 MGP_CBAJ_G0023037.1 mouse_genomes_project 17 26071574 26075939 - Telo2 protein_coding processed_transcript MGP_CBAJ_T0045708.1 MGP_CBAJ_G0023037.1 mouse_genomes_project 17 26071871 26074398 - Telo2 protein_coding processed_transcript MGP_CBAJ_T0045709.1 MGP_CBAJ_G0023037.1 mouse_genomes_project 17 26073951 26076059 - Telo2 protein_coding processed_transcript MGP_CBAJ_T0045710.1 MGP_CBAJ_G0023037.1 mouse_genomes_project 17 26074886 26076701 - Telo2 protein_coding retained_intron MGP_CBAJ_T0003710.1 MGP_CBAJ_G0003334.1 mouse_genomes_project 17 79064249 79065630 + Gm20703 antisense antisense MGP_CBAJ_T0010108.1 MGP_CBAJ_G0008246.1 mouse_genomes_project 17 102909374 102909509 + Gm44345 miRNA miRNA MGP_CBAJ_T0045008.1 MGP_CBAJ_G0022798.1 mouse_genomes_project 17 393341 612913 + MGP_CBAJ_P0045008 Tiam2 protein_coding protein_coding MGP_CBAJ_T0045009.1 MGP_CBAJ_G0022798.1 mouse_genomes_project 17 480659 612913 + MGP_CBAJ_P0045009 Tiam2 protein_coding protein_coding MGP_CBAJ_T0006869.1 MGP_CBAJ_G0005648.1 mouse_genomes_project 17 62153041 62157648 - Gm16712 lincRNA lincRNA MGP_CBAJ_T0046884.1 MGP_CBAJ_G0023310.1 mouse_genomes_project 17 37984456 38000762 + MGP_CBAJ_P0046884 Vars protein_coding protein_coding MGP_CBAJ_T0046885.1 MGP_CBAJ_G0023310.1 mouse_genomes_project 17 37984520 38000470 + MGP_CBAJ_P0046885 Vars protein_coding protein_coding MGP_CBAJ_T0046886.1 MGP_CBAJ_G0023310.1 mouse_genomes_project 17 37984610 38009882 + MGP_CBAJ_P0046886 Vars protein_coding unknown_likely_coding MGP_CBAJ_T0046887.1 MGP_CBAJ_G0023310.1 mouse_genomes_project 17 37984786 37988272 + MGP_CBAJ_P0046887 Vars protein_coding protein_coding MGP_CBAJ_T0046888.1 MGP_CBAJ_G0023310.1 mouse_genomes_project 17 37986126 37988322 + MGP_CBAJ_P0046888 Vars protein_coding protein_coding MGP_CBAJ_T0046889.1 MGP_CBAJ_G0023310.1 mouse_genomes_project 17 37986183 38000762 + Vars protein_coding retained_intron MGP_CBAJ_T0046890.1 MGP_CBAJ_G0023310.1 mouse_genomes_project 17 37987763 37988531 + Vars protein_coding retained_intron MGP_CBAJ_T0046891.1 MGP_CBAJ_G0023310.1 mouse_genomes_project 17 37988181 37988799 + Vars protein_coding retained_intron MGP_CBAJ_T0046892.1 MGP_CBAJ_G0023310.1 mouse_genomes_project 17 37995654 37996839 + Vars protein_coding retained_intron MGP_CBAJ_T0046893.1 MGP_CBAJ_G0023310.1 mouse_genomes_project 17 37996603 37997522 + Vars protein_coding retained_intron MGP_CBAJ_T0046894.1 MGP_CBAJ_G0023310.1 mouse_genomes_project 17 37997722 37998909 + Vars protein_coding retained_intron MGP_CBAJ_T0046895.1 MGP_CBAJ_G0023310.1 mouse_genomes_project 17 37998266 37999487 + MGP_CBAJ_P0046895 Vars protein_coding protein_coding MGP_CBAJ_T0046896.1 MGP_CBAJ_G0023310.1 mouse_genomes_project 17 37998275 37999277 + Vars protein_coding retained_intron MGP_CBAJ_T0046897.1 MGP_CBAJ_G0023310.1 mouse_genomes_project 17 37999404 38000451 + Vars protein_coding retained_intron MGP_CBAJ_T0045533.1 MGP_CBAJ_G0022997.1 mouse_genomes_project 17 25192350 25249305 + Abca3 protein_coding retained_intron MGP_CBAJ_T0045534.1 MGP_CBAJ_G0022997.1 mouse_genomes_project 17 25192423 25261546 + MGP_CBAJ_P0045534 Abca3 protein_coding protein_coding MGP_CBAJ_T0045535.1 MGP_CBAJ_G0022997.1 mouse_genomes_project 17 25192446 25261546 + MGP_CBAJ_P0045535 Abca3 protein_coding protein_coding MGP_CBAJ_T0045536.1 MGP_CBAJ_G0022997.1 mouse_genomes_project 17 25192488 25252485 + Abca3 protein_coding retained_intron MGP_CBAJ_T0045537.1 MGP_CBAJ_G0022997.1 mouse_genomes_project 17 25192488 25223612 + Abca3 protein_coding retained_intron MGP_CBAJ_T0045538.1 MGP_CBAJ_G0022997.1 mouse_genomes_project 17 25192500 25201320 + Abca3 protein_coding processed_transcript MGP_CBAJ_T0045539.1 MGP_CBAJ_G0022997.1 mouse_genomes_project 17 25192505 25234644 + Abca3 protein_coding retained_intron MGP_CBAJ_T0045540.1 MGP_CBAJ_G0022997.1 mouse_genomes_project 17 25204715 25261546 + MGP_CBAJ_P0045540 Abca3 protein_coding protein_coding MGP_CBAJ_T0046724.1 MGP_CBAJ_G0023280.1 mouse_genomes_project 17 37469088 37510721 + MGP_CBAJ_P0046724 Notch4 protein_coding protein_coding MGP_CBAJ_T0046725.1 MGP_CBAJ_G0023280.1 mouse_genomes_project 17 37469118 37470437 + Notch4 protein_coding processed_transcript MGP_CBAJ_T0046726.1 MGP_CBAJ_G0023280.1 mouse_genomes_project 17 37469157 37510449 + MGP_CBAJ_P0046726 Notch4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046727.1 MGP_CBAJ_G0023280.1 mouse_genomes_project 17 37469956 37470398 + Notch4 protein_coding retained_intron MGP_CBAJ_T0046728.1 MGP_CBAJ_G0023280.1 mouse_genomes_project 17 37489263 37500712 + Notch4 protein_coding processed_transcript MGP_CBAJ_T0046729.1 MGP_CBAJ_G0023280.1 mouse_genomes_project 17 37502114 37508840 + MGP_CBAJ_P0046729 Notch4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046730.1 MGP_CBAJ_G0023280.1 mouse_genomes_project 17 37502114 37508892 + MGP_CBAJ_P0046730 Notch4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046731.1 MGP_CBAJ_G0023280.1 mouse_genomes_project 17 37502805 37507870 + Notch4 protein_coding retained_intron MGP_CBAJ_T0046732.1 MGP_CBAJ_G0023280.1 mouse_genomes_project 17 37507882 37508841 + Notch4 protein_coding retained_intron MGP_CBAJ_T0046733.1 MGP_CBAJ_G0023280.1 mouse_genomes_project 17 37508492 37509691 + Notch4 protein_coding retained_intron MGP_CBAJ_T0046734.1 MGP_CBAJ_G0023280.1 mouse_genomes_project 17 37509162 37509719 + Notch4 protein_coding processed_transcript MGP_CBAJ_T0046735.1 MGP_CBAJ_G0023280.1 mouse_genomes_project 17 37509258 37510036 + Notch4 protein_coding processed_transcript MGP_CBAJ_T0097980.1 MGP_CBAJ_G0036253.1 mouse_genomes_project 17 3657368 3657490 + n-R5s26 rRNA rRNA MGP_CBAJ_T0047317.1 MGP_CBAJ_G0023427.1 mouse_genomes_project 17 41326409 41331554 + MGP_CBAJ_P0047317 Olfr119 protein_coding protein_coding MGP_CBAJ_T0011310.1 MGP_CBAJ_G0009448.1 mouse_genomes_project 17 95796154 95796242 + Gm27435 misc_RNA misc_RNA MGP_CBAJ_T0045395.1 MGP_CBAJ_G0022955.1 mouse_genomes_project 17 24007651 24024709 + MGP_CBAJ_P0045395 protein_coding protein_coding MGP_CBAJ_T0101283.1 MGP_CBAJ_G0039405.1 mouse_genomes_project 17 106066044 106090955 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101284.1 MGP_CBAJ_G0039405.1 mouse_genomes_project 17 106066056 106072953 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101285.1 MGP_CBAJ_G0039405.1 mouse_genomes_project 17 106066082 106090958 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101286.1 MGP_CBAJ_G0039405.1 mouse_genomes_project 17 106068439 106090852 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0006878.1 MGP_CBAJ_G0005653.1 mouse_genomes_project 17 78937690 78951349 - 5031415H12Rik lincRNA lincRNA MGP_CBAJ_T0047993.1 MGP_CBAJ_G0023669.1 mouse_genomes_project 17 70318350 70786564 - MGP_CBAJ_P0047993 Fbxl17 protein_coding protein_coding MGP_CBAJ_T0047994.1 MGP_CBAJ_G0023669.1 mouse_genomes_project 17 70319950 70739645 - Fbxl17 protein_coding processed_transcript MGP_CBAJ_T0047995.1 MGP_CBAJ_G0023669.1 mouse_genomes_project 17 70321106 70735191 - Fbxl17 protein_coding processed_transcript MGP_CBAJ_T0047996.1 MGP_CBAJ_G0023669.1 mouse_genomes_project 17 70664046 70766441 - Fbxl17 protein_coding processed_transcript MGP_CBAJ_T0011303.1 MGP_CBAJ_G0009441.1 mouse_genomes_project 17 51986719 51987013 - Gm23657 misc_RNA misc_RNA MGP_CBAJ_T0047580.1 MGP_CBAJ_G0023523.1 mouse_genomes_project 17 51469226 51550802 - MGP_CBAJ_P0047580 Ptk7 protein_coding protein_coding MGP_CBAJ_T0047870.1 MGP_CBAJ_G0023618.1 mouse_genomes_project 17 62408607 62416718 - MGP_CBAJ_P0047870 Mydgf protein_coding protein_coding MGP_CBAJ_T0047871.1 MGP_CBAJ_G0023618.1 mouse_genomes_project 17 62411014 62416647 - Mydgf protein_coding retained_intron MGP_CBAJ_T0047872.1 MGP_CBAJ_G0023618.1 mouse_genomes_project 17 62412183 62416462 - Mydgf protein_coding processed_transcript MGP_CBAJ_T0047979.1 MGP_CBAJ_G0023662.1 mouse_genomes_project 17 63847820 63985795 + MGP_CBAJ_P0047979 Adgre1 protein_coding protein_coding MGP_CBAJ_T0047980.1 MGP_CBAJ_G0023662.1 mouse_genomes_project 17 63847848 63985789 + MGP_CBAJ_P0047980 Adgre1 protein_coding protein_coding MGP_CBAJ_T0045216.1 MGP_CBAJ_G0022867.1 mouse_genomes_project 17 13062428 13187416 + MGP_CBAJ_P0045216 Smoc2 protein_coding protein_coding MGP_CBAJ_T0048257.1 MGP_CBAJ_G0023752.1 mouse_genomes_project 17 89513697 89551282 - MGP_CBAJ_P0048257 Hnrnpll protein_coding protein_coding MGP_CBAJ_T0048258.1 MGP_CBAJ_G0023752.1 mouse_genomes_project 17 89513697 89551175 - MGP_CBAJ_P0048258 Hnrnpll protein_coding protein_coding MGP_CBAJ_T0048259.1 MGP_CBAJ_G0023752.1 mouse_genomes_project 17 89514047 89551175 - MGP_CBAJ_P0048259 Hnrnpll protein_coding nonsense_mediated_decay MGP_CBAJ_T0048260.1 MGP_CBAJ_G0023752.1 mouse_genomes_project 17 89514551 89519767 - Hnrnpll protein_coding retained_intron MGP_CBAJ_T0048261.1 MGP_CBAJ_G0023752.1 mouse_genomes_project 17 89521359 89551142 - Hnrnpll protein_coding retained_intron MGP_CBAJ_T0048262.1 MGP_CBAJ_G0023752.1 mouse_genomes_project 17 89529079 89551083 - Hnrnpll protein_coding retained_intron MGP_CBAJ_T0048263.1 MGP_CBAJ_G0023752.1 mouse_genomes_project 17 89535265 89551216 - Hnrnpll protein_coding retained_intron MGP_CBAJ_T0047981.1 MGP_CBAJ_G0023663.1 mouse_genomes_project 17 64006943 64050259 - MGP_CBAJ_P0047981 Vmn2r120 protein_coding protein_coding MGP_CBAJ_T0048249.1 MGP_CBAJ_G0023746.1 mouse_genomes_project 17 88412574 88456027 + MGP_CBAJ_P0048249 Qpct protein_coding protein_coding MGP_CBAJ_T0045337.1 MGP_CBAJ_G0022924.1 mouse_genomes_project 17 21326947 21327937 + MGP_CBAJ_P0045337 Vmn1r234 protein_coding protein_coding MGP_CBAJ_T0011316.1 MGP_CBAJ_G0009454.1 mouse_genomes_project 17 95803694 95803887 + Gm27427 misc_RNA misc_RNA MGP_CBAJ_T0101733.1 MGP_CBAJ_G0039764.1 mouse_genomes_project 17 39831962 39833893 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010070.1 MGP_CBAJ_G0008208.1 mouse_genomes_project 17 28714522 28714584 + Mir7217 miRNA miRNA MGP_CBAJ_T0047763.1 MGP_CBAJ_G0023576.1 mouse_genomes_project 17 53723042 53736740 + MGP_CBAJ_P0047763 Unc5cl protein_coding protein_coding MGP_CBAJ_T0047764.1 MGP_CBAJ_G0023576.1 mouse_genomes_project 17 53730470 53736734 + MGP_CBAJ_P0047764 Unc5cl protein_coding nonsense_mediated_decay MGP_CBAJ_T0047765.1 MGP_CBAJ_G0023576.1 mouse_genomes_project 17 53730495 53827399 + MGP_CBAJ_P0047765 Unc5cl protein_coding nonsense_mediated_decay MGP_CBAJ_T0047766.1 MGP_CBAJ_G0023576.1 mouse_genomes_project 17 53730501 53733089 + MGP_CBAJ_P0047766 Unc5cl protein_coding protein_coding MGP_CBAJ_T0047767.1 MGP_CBAJ_G0023576.1 mouse_genomes_project 17 53730519 53736732 + MGP_CBAJ_P0047767 Unc5cl protein_coding nonsense_mediated_decay MGP_CBAJ_T0047768.1 MGP_CBAJ_G0023576.1 mouse_genomes_project 17 53730539 53827292 + MGP_CBAJ_P0047768 Unc5cl protein_coding nonsense_mediated_decay MGP_CBAJ_T0047720.1 MGP_CBAJ_G0023562.1 mouse_genomes_project 17 53216282 53217834 - MGP_CBAJ_P0047720 1700122O11Rik protein_coding protein_coding MGP_CBAJ_T0006793.1 MGP_CBAJ_G0005589.1 mouse_genomes_project 17 4337000 4369006 - Gm2885 lincRNA lincRNA MGP_CBAJ_T0046197.1 MGP_CBAJ_G0023149.1 mouse_genomes_project 17 30535939 30572002 + MGP_CBAJ_P0046197 Pnpla1 protein_coding protein_coding MGP_CBAJ_T0046198.1 MGP_CBAJ_G0023149.1 mouse_genomes_project 17 30535939 30572002 + MGP_CBAJ_P0046198 Pnpla1 protein_coding protein_coding MGP_CBAJ_T0101061.1 MGP_CBAJ_G0039282.1 mouse_genomes_project 17 26983742 26984113 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101062.1 MGP_CBAJ_G0039282.1 mouse_genomes_project 17 26983748 26983939 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0047245.1 MGP_CBAJ_G0023393.1 mouse_genomes_project 17 40423109 40427231 - MGP_CBAJ_P0047245 Znrd1 protein_coding protein_coding MGP_CBAJ_T0047246.1 MGP_CBAJ_G0023393.1 mouse_genomes_project 17 40423111 40427282 - MGP_CBAJ_P0047246 Znrd1 protein_coding protein_coding MGP_CBAJ_T0047247.1 MGP_CBAJ_G0023393.1 mouse_genomes_project 17 40423164 40427067 - MGP_CBAJ_P0047247 Znrd1 protein_coding protein_coding MGP_CBAJ_T0047248.1 MGP_CBAJ_G0023393.1 mouse_genomes_project 17 40423196 40427308 - Znrd1 protein_coding processed_transcript MGP_CBAJ_T0045440.1 MGP_CBAJ_G0022972.1 mouse_genomes_project 17 24498908 24507957 - MGP_CBAJ_P0045440 Flywch2 protein_coding protein_coding MGP_CBAJ_T0045441.1 MGP_CBAJ_G0022972.1 mouse_genomes_project 17 24498951 24501788 - MGP_CBAJ_P0045441 Flywch2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045442.1 MGP_CBAJ_G0022972.1 mouse_genomes_project 17 24498984 24507928 - MGP_CBAJ_P0045442 Flywch2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047983.1 MGP_CBAJ_G0023665.1 mouse_genomes_project 17 64286412 64990962 + MGP_CBAJ_P0047983 Cntnap5c protein_coding unknown_likely_coding MGP_CBAJ_T0047984.1 MGP_CBAJ_G0023665.1 mouse_genomes_project 17 64286581 64990962 + MGP_CBAJ_P0047984 Cntnap5c protein_coding protein_coding MGP_CBAJ_T0045062.1 MGP_CBAJ_G0022820.1 mouse_genomes_project 17 5055382 5078101 + MGP_CBAJ_P0045062 protein_coding protein_coding MGP_CBAJ_T0046003.1 MGP_CBAJ_G0023108.1 mouse_genomes_project 17 28220259 28221755 - MGP_CBAJ_P0046003 Cuta protein_coding protein_coding MGP_CBAJ_T0046004.1 MGP_CBAJ_G0023108.1 mouse_genomes_project 17 28220259 28221765 - MGP_CBAJ_P0046004 Cuta protein_coding protein_coding MGP_CBAJ_T0101740.1 MGP_CBAJ_G0039771.1 mouse_genomes_project 17 40125109 40126701 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047830.1 MGP_CBAJ_G0023597.1 mouse_genomes_project 17 61771313 61798789 - MGP_CBAJ_P0047830 Vmn2r118 protein_coding protein_coding MGP_CBAJ_T0047494.1 MGP_CBAJ_G0023503.1 mouse_genomes_project 17 50944819 50965988 + MGP_CBAJ_P0047494 Mrps18a protein_coding protein_coding MGP_CBAJ_T0047495.1 MGP_CBAJ_G0023503.1 mouse_genomes_project 17 50944828 50960205 + Mrps18a protein_coding retained_intron MGP_CBAJ_T0047496.1 MGP_CBAJ_G0023503.1 mouse_genomes_project 17 50944829 50962943 + MGP_CBAJ_P0047496 Mrps18a protein_coding protein_coding MGP_CBAJ_T0047498.1 MGP_CBAJ_G0023503.1 mouse_genomes_project 17 50959880 50965948 + Mrps18a protein_coding processed_transcript MGP_CBAJ_T0047499.1 MGP_CBAJ_G0023503.1 mouse_genomes_project 17 50962352 50964801 + Mrps18a protein_coding retained_intron MGP_CBAJ_T0047500.1 MGP_CBAJ_G0023503.1 mouse_genomes_project 17 50962535 50965871 + Mrps18a protein_coding retained_intron MGP_CBAJ_T0047568.1 MGP_CBAJ_G0023520.1 mouse_genomes_project 17 51385398 51388228 + MGP_CBAJ_P0047568 Dnph1 protein_coding protein_coding MGP_CBAJ_T0046620.1 MGP_CBAJ_G0023255.1 mouse_genomes_project 17 36689610 36693504 - MGP_CBAJ_P0046620 Ring1 protein_coding protein_coding MGP_CBAJ_T0046621.1 MGP_CBAJ_G0023255.1 mouse_genomes_project 17 36689918 36692760 - Ring1 protein_coding retained_intron MGP_CBAJ_T0046622.1 MGP_CBAJ_G0023255.1 mouse_genomes_project 17 36693014 36693476 - Ring1 protein_coding retained_intron MGP_CBAJ_T0046272.1 MGP_CBAJ_G0023167.1 mouse_genomes_project 17 31386679 31448509 + MGP_CBAJ_P0046272 Tbc1d22b protein_coding protein_coding MGP_CBAJ_T0046273.1 MGP_CBAJ_G0023167.1 mouse_genomes_project 17 31411283 31448508 + Tbc1d22b protein_coding retained_intron MGP_CBAJ_T0046680.1 MGP_CBAJ_G0023266.1 mouse_genomes_project 17 36923139 36939667 + MGP_CBAJ_P0046680 Tap1 protein_coding protein_coding MGP_CBAJ_T0046681.1 MGP_CBAJ_G0023266.1 mouse_genomes_project 17 36923314 36931558 + Tap1 protein_coding retained_intron MGP_CBAJ_T0046682.1 MGP_CBAJ_G0023266.1 mouse_genomes_project 17 36923320 36939667 + Tap1 protein_coding retained_intron MGP_CBAJ_T0046683.1 MGP_CBAJ_G0023266.1 mouse_genomes_project 17 36923388 36939661 + MGP_CBAJ_P0046683 Tap1 protein_coding protein_coding MGP_CBAJ_T0046684.1 MGP_CBAJ_G0023266.1 mouse_genomes_project 17 36929171 36939662 + Tap1 protein_coding retained_intron MGP_CBAJ_T0046685.1 MGP_CBAJ_G0023266.1 mouse_genomes_project 17 36930031 36936010 + MGP_CBAJ_P0046685 Tap1 protein_coding protein_coding MGP_CBAJ_T0046686.1 MGP_CBAJ_G0023266.1 mouse_genomes_project 17 36932319 36939029 + Tap1 protein_coding retained_intron MGP_CBAJ_T0045309.1 MGP_CBAJ_G0022903.1 mouse_genomes_project 17 19516557 19625919 + MGP_CBAJ_P0045309 protein_coding protein_coding MGP_CBAJ_T0048072.1 MGP_CBAJ_G0023694.1 mouse_genomes_project 17 76790649 76798183 + MGP_CBAJ_P0048072 Tmem200c protein_coding protein_coding MGP_CBAJ_T0003647.1 MGP_CBAJ_G0003287.1 mouse_genomes_project 17 12427166 12428129 - Gm16049 antisense antisense MGP_CBAJ_T0000945.1 MGP_CBAJ_G0000878.1 mouse_genomes_project 17 9603004 9605851 - TEC TEC MGP_CBAJ_T0047348.1 MGP_CBAJ_G0023452.1 mouse_genomes_project 17 43392719 43395342 + MGP_CBAJ_P0047348 protein_coding protein_coding MGP_CBAJ_T0100248.1 MGP_CBAJ_G0038503.1 mouse_genomes_project 17 26288250 26288387 + Gm25921 snoRNA snoRNA MGP_CBAJ_T0046872.1 MGP_CBAJ_G0023308.1 mouse_genomes_project 17 37950037 37959224 + MGP_CBAJ_P0046872 Hspa1l protein_coding protein_coding MGP_CBAJ_T0046225.1 MGP_CBAJ_G0023154.1 mouse_genomes_project 17 30749381 30765655 + protein_coding retained_intron MGP_CBAJ_T0046226.1 MGP_CBAJ_G0023154.1 mouse_genomes_project 17 30749381 30766780 + MGP_CBAJ_P0046226 protein_coding protein_coding MGP_CBAJ_T0046227.1 MGP_CBAJ_G0023154.1 mouse_genomes_project 17 30756316 30763701 + protein_coding retained_intron MGP_CBAJ_T0045127.1 MGP_CBAJ_G0022841.1 mouse_genomes_project 17 7039328 7061032 + MGP_CBAJ_P0045127 1700010I14Rik protein_coding protein_coding MGP_CBAJ_T0045128.1 MGP_CBAJ_G0022841.1 mouse_genomes_project 17 7039352 7061031 + MGP_CBAJ_P0045128 1700010I14Rik protein_coding protein_coding MGP_CBAJ_T0045129.1 MGP_CBAJ_G0022841.1 mouse_genomes_project 17 7039378 7057987 + 1700010I14Rik protein_coding processed_transcript MGP_CBAJ_T0047470.1 MGP_CBAJ_G0023499.1 mouse_genomes_project 17 50433319 50462360 - MGP_CBAJ_P0047470 Tmem63b protein_coding protein_coding MGP_CBAJ_T0047471.1 MGP_CBAJ_G0023499.1 mouse_genomes_project 17 50436156 50438375 - Tmem63b protein_coding retained_intron MGP_CBAJ_T0047472.1 MGP_CBAJ_G0023499.1 mouse_genomes_project 17 50437248 50439626 - Tmem63b protein_coding retained_intron MGP_CBAJ_T0047473.1 MGP_CBAJ_G0023499.1 mouse_genomes_project 17 50440887 50462073 - MGP_CBAJ_P0047473 Tmem63b protein_coding protein_coding MGP_CBAJ_T0047474.1 MGP_CBAJ_G0023499.1 mouse_genomes_project 17 50443186 50463006 - MGP_CBAJ_P0047474 Tmem63b protein_coding protein_coding MGP_CBAJ_T0047475.1 MGP_CBAJ_G0023499.1 mouse_genomes_project 17 50446918 50456716 - MGP_CBAJ_P0047475 Tmem63b protein_coding protein_coding MGP_CBAJ_T0047476.1 MGP_CBAJ_G0023499.1 mouse_genomes_project 17 50447148 50462238 - MGP_CBAJ_P0047476 Tmem63b protein_coding protein_coding MGP_CBAJ_T0047477.1 MGP_CBAJ_G0023499.1 mouse_genomes_project 17 50455056 50462221 - MGP_CBAJ_P0047477 Tmem63b protein_coding protein_coding MGP_CBAJ_T0047478.1 MGP_CBAJ_G0023499.1 mouse_genomes_project 17 50462324 50462988 - Tmem63b protein_coding processed_transcript MGP_CBAJ_T0006812.1 MGP_CBAJ_G0005605.1 mouse_genomes_project 17 24512266 24515942 + D930048G16Rik lincRNA lincRNA MGP_CBAJ_T0045712.1 MGP_CBAJ_G0023039.1 mouse_genomes_project 17 26095538 26126085 + MGP_CBAJ_P0045712 Clcn7 protein_coding protein_coding MGP_CBAJ_T0045713.1 MGP_CBAJ_G0023039.1 mouse_genomes_project 17 26095612 26110535 + Clcn7 protein_coding retained_intron MGP_CBAJ_T0045714.1 MGP_CBAJ_G0023039.1 mouse_genomes_project 17 26101041 26126079 + MGP_CBAJ_P0045714 Clcn7 protein_coding protein_coding MGP_CBAJ_T0045715.1 MGP_CBAJ_G0023039.1 mouse_genomes_project 17 26109800 26114584 + MGP_CBAJ_P0045715 Clcn7 protein_coding protein_coding MGP_CBAJ_T0045716.1 MGP_CBAJ_G0023039.1 mouse_genomes_project 17 26110307 26116398 + Clcn7 protein_coding processed_transcript MGP_CBAJ_T0045717.1 MGP_CBAJ_G0023039.1 mouse_genomes_project 17 26115171 26121913 + MGP_CBAJ_P0045717 Clcn7 protein_coding protein_coding MGP_CBAJ_T0045718.1 MGP_CBAJ_G0023039.1 mouse_genomes_project 17 26122658 26123723 + Clcn7 protein_coding retained_intron MGP_CBAJ_T0046824.1 MGP_CBAJ_G0023297.1 mouse_genomes_project 17 37811065 37817068 + MGP_CBAJ_P0046824 Nelfe protein_coding protein_coding MGP_CBAJ_T0046825.1 MGP_CBAJ_G0023297.1 mouse_genomes_project 17 37811072 37816953 + MGP_CBAJ_P0046825 Nelfe protein_coding protein_coding MGP_CBAJ_T0046826.1 MGP_CBAJ_G0023297.1 mouse_genomes_project 17 37811082 37814788 + MGP_CBAJ_P0046826 Nelfe protein_coding protein_coding MGP_CBAJ_T0046827.1 MGP_CBAJ_G0023297.1 mouse_genomes_project 17 37811082 37817071 + MGP_CBAJ_P0046827 Nelfe protein_coding protein_coding MGP_CBAJ_T0046828.1 MGP_CBAJ_G0023297.1 mouse_genomes_project 17 37813282 37814544 + Nelfe protein_coding retained_intron MGP_CBAJ_T0046829.1 MGP_CBAJ_G0023297.1 mouse_genomes_project 17 37814610 37815225 + Nelfe protein_coding retained_intron MGP_CBAJ_T0046830.1 MGP_CBAJ_G0023297.1 mouse_genomes_project 17 37814954 37815453 + Nelfe protein_coding retained_intron MGP_CBAJ_T0046144.1 MGP_CBAJ_G0023138.1 mouse_genomes_project 17 29897188 29900740 - Tulp1 protein_coding retained_intron MGP_CBAJ_T0046145.1 MGP_CBAJ_G0023138.1 mouse_genomes_project 17 29897188 29911113 - MGP_CBAJ_P0046145 Tulp1 protein_coding protein_coding MGP_CBAJ_T0046146.1 MGP_CBAJ_G0023138.1 mouse_genomes_project 17 29897189 29904751 - MGP_CBAJ_P0046146 Tulp1 protein_coding protein_coding MGP_CBAJ_T0046147.1 MGP_CBAJ_G0023138.1 mouse_genomes_project 17 29897527 29904719 - MGP_CBAJ_P0046147 Tulp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046148.1 MGP_CBAJ_G0023138.1 mouse_genomes_project 17 29898203 29908885 - Tulp1 protein_coding retained_intron MGP_CBAJ_T0046149.1 MGP_CBAJ_G0023138.1 mouse_genomes_project 17 29898211 29902050 - Tulp1 protein_coding retained_intron MGP_CBAJ_T0046150.1 MGP_CBAJ_G0023138.1 mouse_genomes_project 17 29898735 29905178 - MGP_CBAJ_P0046150 Tulp1 protein_coding protein_coding MGP_CBAJ_T0046151.1 MGP_CBAJ_G0023138.1 mouse_genomes_project 17 29901490 29911147 - MGP_CBAJ_P0046151 Tulp1 protein_coding protein_coding MGP_CBAJ_T0046152.1 MGP_CBAJ_G0023138.1 mouse_genomes_project 17 29904506 29908397 - Tulp1 protein_coding retained_intron MGP_CBAJ_T0046153.1 MGP_CBAJ_G0023138.1 mouse_genomes_project 17 29907600 29908922 - Tulp1 protein_coding retained_intron MGP_CBAJ_T0046154.1 MGP_CBAJ_G0023138.1 mouse_genomes_project 17 29908659 29911111 - Tulp1 protein_coding retained_intron MGP_CBAJ_T0046155.1 MGP_CBAJ_G0023138.1 mouse_genomes_project 17 29909650 29911104 - Tulp1 protein_coding retained_intron MGP_CBAJ_T0046566.1 MGP_CBAJ_G0023244.1 mouse_genomes_project 17 36540946 36542957 + MGP_CBAJ_P0046566 Daxx protein_coding protein_coding MGP_CBAJ_T0046567.1 MGP_CBAJ_G0023244.1 mouse_genomes_project 17 36540977 36547206 + MGP_CBAJ_P0046567 Daxx protein_coding protein_coding MGP_CBAJ_T0046568.1 MGP_CBAJ_G0023244.1 mouse_genomes_project 17 36541030 36543046 + MGP_CBAJ_P0046568 Daxx protein_coding protein_coding MGP_CBAJ_T0046569.1 MGP_CBAJ_G0023244.1 mouse_genomes_project 17 36541047 36547132 + MGP_CBAJ_P0046569 Daxx protein_coding protein_coding MGP_CBAJ_T0046570.1 MGP_CBAJ_G0023244.1 mouse_genomes_project 17 36541133 36547199 + MGP_CBAJ_P0046570 Daxx protein_coding protein_coding MGP_CBAJ_T0046571.1 MGP_CBAJ_G0023244.1 mouse_genomes_project 17 36541809 36543431 + Daxx protein_coding retained_intron MGP_CBAJ_T0046572.1 MGP_CBAJ_G0023244.1 mouse_genomes_project 17 36541958 36547199 + MGP_CBAJ_P0046572 Daxx protein_coding protein_coding MGP_CBAJ_T0046573.1 MGP_CBAJ_G0023244.1 mouse_genomes_project 17 36544280 36545610 + Daxx protein_coding processed_transcript MGP_CBAJ_T0046574.1 MGP_CBAJ_G0023244.1 mouse_genomes_project 17 36545169 36547132 + Daxx protein_coding processed_transcript MGP_CBAJ_T0045687.1 MGP_CBAJ_G0023035.1 mouse_genomes_project 17 25972703 26050555 + MGP_CBAJ_P0045687 Ift140 protein_coding protein_coding MGP_CBAJ_T0045688.1 MGP_CBAJ_G0023035.1 mouse_genomes_project 17 25973003 26057293 + MGP_CBAJ_P0045688 Ift140 protein_coding protein_coding MGP_CBAJ_T0045689.1 MGP_CBAJ_G0023035.1 mouse_genomes_project 17 25973011 25975531 + Ift140 protein_coding processed_transcript MGP_CBAJ_T0045690.1 MGP_CBAJ_G0023035.1 mouse_genomes_project 17 25984667 26054529 + Ift140 protein_coding retained_intron MGP_CBAJ_T0045691.1 MGP_CBAJ_G0023035.1 mouse_genomes_project 17 25984903 25995962 + MGP_CBAJ_P0045691 Ift140 protein_coding protein_coding MGP_CBAJ_T0045692.1 MGP_CBAJ_G0023035.1 mouse_genomes_project 17 26003346 26045460 + Ift140 protein_coding processed_transcript MGP_CBAJ_T0045693.1 MGP_CBAJ_G0023035.1 mouse_genomes_project 17 26003395 26057301 + Ift140 protein_coding processed_transcript MGP_CBAJ_T0045696.1 MGP_CBAJ_G0023035.1 mouse_genomes_project 17 26044316 26057296 + MGP_CBAJ_P0045696 Ift140 protein_coding unknown_likely_coding MGP_CBAJ_T0045697.1 MGP_CBAJ_G0023035.1 mouse_genomes_project 17 26044325 26057296 + MGP_CBAJ_P0045697 Ift140 protein_coding unknown_likely_coding MGP_CBAJ_T0045698.1 MGP_CBAJ_G0023035.1 mouse_genomes_project 17 26048448 26050898 + Ift140 protein_coding retained_intron MGP_CBAJ_T0047686.1 MGP_CBAJ_G0023558.1 mouse_genomes_project 17 52836049 52846787 + MGP_CBAJ_P0047686 Pgc protein_coding protein_coding MGP_CBAJ_T0047687.1 MGP_CBAJ_G0023558.1 mouse_genomes_project 17 52836051 52844647 + MGP_CBAJ_P0047687 Pgc protein_coding protein_coding MGP_CBAJ_T0010067.1 MGP_CBAJ_G0008205.1 mouse_genomes_project 17 28406825 28406892 + Mir7677 miRNA miRNA MGP_CBAJ_T0047931.1 MGP_CBAJ_G0023637.1 mouse_genomes_project 17 63134275 63139669 + MGP_CBAJ_P0047931 Dus3l protein_coding protein_coding MGP_CBAJ_T0047636.1 MGP_CBAJ_G0023547.1 mouse_genomes_project 17 52499488 52531923 + MGP_CBAJ_P0047636 AI661453 protein_coding protein_coding MGP_CBAJ_T0047637.1 MGP_CBAJ_G0023547.1 mouse_genomes_project 17 52499543 52532417 + MGP_CBAJ_P0047637 AI661453 protein_coding protein_coding MGP_CBAJ_T0046937.1 MGP_CBAJ_G0023321.1 mouse_genomes_project 17 38073248 38075843 + Abhd16a protein_coding retained_intron MGP_CBAJ_T0046938.1 MGP_CBAJ_G0023321.1 mouse_genomes_project 17 38073276 38087049 + MGP_CBAJ_P0046938 Abhd16a protein_coding protein_coding MGP_CBAJ_T0046939.1 MGP_CBAJ_G0023321.1 mouse_genomes_project 17 38073299 38087018 + MGP_CBAJ_P0046939 Abhd16a protein_coding nonsense_mediated_decay MGP_CBAJ_T0046940.1 MGP_CBAJ_G0023321.1 mouse_genomes_project 17 38073857 38075983 + Abhd16a protein_coding retained_intron MGP_CBAJ_T0046941.1 MGP_CBAJ_G0023321.1 mouse_genomes_project 17 38080347 38084942 + Abhd16a protein_coding processed_transcript MGP_CBAJ_T0046942.1 MGP_CBAJ_G0023321.1 mouse_genomes_project 17 38083932 38084697 + Abhd16a protein_coding retained_intron MGP_CBAJ_T0046943.1 MGP_CBAJ_G0023321.1 mouse_genomes_project 17 38084855 38086030 + Abhd16a protein_coding retained_intron MGP_CBAJ_T0047936.1 MGP_CBAJ_G0023640.1 mouse_genomes_project 17 63218703 63253640 - MGP_CBAJ_P0047936 Acsbg2 protein_coding protein_coding MGP_CBAJ_T0101063.1 MGP_CBAJ_G0039283.1 mouse_genomes_project 17 29547915 29550202 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101064.1 MGP_CBAJ_G0039283.1 mouse_genomes_project 17 29548647 29549896 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0047290.1 MGP_CBAJ_G0023403.1 mouse_genomes_project 17 40677719 40678767 - MGP_CBAJ_P0047290 Olfr93 protein_coding protein_coding MGP_CBAJ_T0101703.1 MGP_CBAJ_G0039734.1 mouse_genomes_project 17 21411801 21412537 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047582.1 MGP_CBAJ_G0023525.1 mouse_genomes_project 17 51567521 51568946 + Mrpl2 protein_coding processed_transcript MGP_CBAJ_T0047583.1 MGP_CBAJ_G0023525.1 mouse_genomes_project 17 51567548 51571418 + MGP_CBAJ_P0047583 Mrpl2 protein_coding protein_coding MGP_CBAJ_T0047584.1 MGP_CBAJ_G0023525.1 mouse_genomes_project 17 51567581 51571417 + MGP_CBAJ_P0047584 Mrpl2 protein_coding protein_coding MGP_CBAJ_T0047585.1 MGP_CBAJ_G0023525.1 mouse_genomes_project 17 51570290 51571277 + Mrpl2 protein_coding processed_transcript MGP_CBAJ_T0047045.1 MGP_CBAJ_G0023349.1 mouse_genomes_project 17 38747603 38749105 + MGP_CBAJ_P0047045 2300002M23Rik protein_coding protein_coding MGP_CBAJ_T0047046.1 MGP_CBAJ_G0023349.1 mouse_genomes_project 17 38747638 38749083 + 2300002M23Rik protein_coding retained_intron MGP_CBAJ_T0047479.1 MGP_CBAJ_G0023500.1 mouse_genomes_project 17 50462422 50474304 + MGP_CBAJ_P0047479 Mrpl14 protein_coding protein_coding MGP_CBAJ_T0047480.1 MGP_CBAJ_G0023500.1 mouse_genomes_project 17 50462457 50473986 + Mrpl14 protein_coding processed_transcript MGP_CBAJ_T0047481.1 MGP_CBAJ_G0023500.1 mouse_genomes_project 17 50471222 50474208 + Mrpl14 protein_coding processed_transcript MGP_CBAJ_T0000960.1 MGP_CBAJ_G0000892.1 mouse_genomes_project 17 60235680 60236006 + TEC TEC MGP_CBAJ_T0046998.1 MGP_CBAJ_G0023335.1 mouse_genomes_project 17 38229773 38244662 - MGP_CBAJ_P0046998 Nfkbil1 protein_coding protein_coding MGP_CBAJ_T0047000.1 MGP_CBAJ_G0023335.1 mouse_genomes_project 17 38230433 38231254 - Nfkbil1 protein_coding processed_transcript MGP_CBAJ_T0045018.1 MGP_CBAJ_G0022803.1 mouse_genomes_project 17 2445006 2445760 - protein_coding processed_transcript MGP_CBAJ_T0011301.1 MGP_CBAJ_G0009439.1 mouse_genomes_project 17 48523533 48523819 - Gm24532 misc_RNA misc_RNA MGP_CBAJ_T0047926.1 MGP_CBAJ_G0023633.1 mouse_genomes_project 17 63019342 63067201 + MGP_CBAJ_P0047926 Ranbp3 protein_coding protein_coding MGP_CBAJ_T0010094.1 MGP_CBAJ_G0008232.1 mouse_genomes_project 17 62404809 62404922 - Gm44397 miRNA miRNA MGP_CBAJ_T0047620.1 MGP_CBAJ_G0023543.1 mouse_genomes_project 17 52429397 52439190 + MGP_CBAJ_P0047620 Mrps10 protein_coding protein_coding MGP_CBAJ_T0047621.1 MGP_CBAJ_G0023543.1 mouse_genomes_project 17 52429402 52436456 + Mrps10 protein_coding retained_intron MGP_CBAJ_T0047622.1 MGP_CBAJ_G0023543.1 mouse_genomes_project 17 52429403 52435577 + MGP_CBAJ_P0047622 Mrps10 protein_coding protein_coding MGP_CBAJ_T0047623.1 MGP_CBAJ_G0023543.1 mouse_genomes_project 17 52429408 52436500 + Mrps10 protein_coding retained_intron MGP_CBAJ_T0047624.1 MGP_CBAJ_G0023543.1 mouse_genomes_project 17 52429417 52439199 + MGP_CBAJ_P0047624 Mrps10 protein_coding protein_coding MGP_CBAJ_T0047625.1 MGP_CBAJ_G0023543.1 mouse_genomes_project 17 52430618 52438310 + Mrps10 protein_coding retained_intron MGP_CBAJ_T0047626.1 MGP_CBAJ_G0023543.1 mouse_genomes_project 17 52432222 52438330 + Mrps10 protein_coding processed_transcript MGP_CBAJ_T0047627.1 MGP_CBAJ_G0023543.1 mouse_genomes_project 17 52432981 52433844 + Mrps10 protein_coding retained_intron MGP_CBAJ_T0047628.1 MGP_CBAJ_G0023543.1 mouse_genomes_project 17 52435981 52441928 + Mrps10 protein_coding retained_intron MGP_CBAJ_T0046309.1 MGP_CBAJ_G0023174.1 mouse_genomes_project 17 32149690 32601048 - MGP_CBAJ_P0046309 Btbd9 protein_coding protein_coding MGP_CBAJ_T0046310.1 MGP_CBAJ_G0023174.1 mouse_genomes_project 17 32149690 32601048 - MGP_CBAJ_P0046310 Btbd9 protein_coding protein_coding MGP_CBAJ_T0048347.1 MGP_CBAJ_G0023792.1 mouse_genomes_project 17 97110391 97209216 + MGP_CBAJ_P0048347 Epas1 protein_coding protein_coding MGP_CBAJ_T0045626.1 MGP_CBAJ_G0023021.1 mouse_genomes_project 17 25648126 25656641 + MGP_CBAJ_P0045626 Rpl3l protein_coding unknown_likely_coding MGP_CBAJ_T0045627.1 MGP_CBAJ_G0023021.1 mouse_genomes_project 17 25648297 25656636 + MGP_CBAJ_P0045627 Rpl3l protein_coding protein_coding MGP_CBAJ_T0045628.1 MGP_CBAJ_G0023021.1 mouse_genomes_project 17 25648651 25653862 + MGP_CBAJ_P0045628 Rpl3l protein_coding protein_coding MGP_CBAJ_T0045629.1 MGP_CBAJ_G0023021.1 mouse_genomes_project 17 25653181 25656636 + MGP_CBAJ_P0045629 Rpl3l protein_coding protein_coding MGP_CBAJ_T0048062.1 MGP_CBAJ_G0023690.1 mouse_genomes_project 17 75438043 75439802 - MGP_CBAJ_P0048062 Lrrc30 protein_coding protein_coding MGP_CBAJ_T0101701.1 MGP_CBAJ_G0039732.1 mouse_genomes_project 17 21323599 21324112 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0003694.1 MGP_CBAJ_G0003322.1 mouse_genomes_project 17 49389295 49391063 + Runx2os1 antisense antisense MGP_CBAJ_T0046738.1 MGP_CBAJ_G0023282.1 mouse_genomes_project 17 37515293 37521000 + MGP_CBAJ_P0046738 Pbx2 protein_coding protein_coding MGP_CBAJ_T0046740.1 MGP_CBAJ_G0023282.1 mouse_genomes_project 17 37517334 37522485 + MGP_CBAJ_P0046740 Pbx2 protein_coding protein_coding MGP_CBAJ_T0046741.1 MGP_CBAJ_G0023282.1 mouse_genomes_project 17 37517817 37521500 + MGP_CBAJ_P0046741 Pbx2 protein_coding protein_coding MGP_CBAJ_T0046742.1 MGP_CBAJ_G0023282.1 mouse_genomes_project 17 37518477 37519463 + MGP_CBAJ_P0046742 Pbx2 protein_coding protein_coding MGP_CBAJ_T0046743.1 MGP_CBAJ_G0023282.1 mouse_genomes_project 17 37520543 37521311 + Pbx2 protein_coding retained_intron MGP_CBAJ_T0047300.1 MGP_CBAJ_G0023413.1 mouse_genomes_project 17 40932522 40933464 - MGP_CBAJ_P0047300 Olfr103 protein_coding protein_coding MGP_CBAJ_T0047301.1 MGP_CBAJ_G0023413.1 mouse_genomes_project 17 40932522 40935887 - MGP_CBAJ_P0047301 Olfr103 protein_coding protein_coding MGP_CBAJ_T0013074.1 MGP_CBAJ_G0011186.1 mouse_genomes_project 17 39635951 39636221 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0047219.1 MGP_CBAJ_G0023385.1 mouse_genomes_project 17 40268211 40271605 + MGP_CBAJ_P0047219 H2-M10.6 protein_coding protein_coding MGP_CBAJ_T0045443.1 MGP_CBAJ_G0022973.1 mouse_genomes_project 17 24512396 24541511 + MGP_CBAJ_P0045443 Srrm2 protein_coding protein_coding MGP_CBAJ_T0045444.1 MGP_CBAJ_G0022973.1 mouse_genomes_project 17 24536195 24558102 + MGP_CBAJ_P0045444 Srrm2 protein_coding protein_coding MGP_CBAJ_T0045445.1 MGP_CBAJ_G0022973.1 mouse_genomes_project 17 24536229 24558107 + MGP_CBAJ_P0045445 Srrm2 protein_coding protein_coding MGP_CBAJ_T0045446.1 MGP_CBAJ_G0022973.1 mouse_genomes_project 17 24540912 24543238 + MGP_CBAJ_P0045446 Srrm2 protein_coding protein_coding MGP_CBAJ_T0045447.1 MGP_CBAJ_G0022973.1 mouse_genomes_project 17 24541092 24541703 + Srrm2 protein_coding retained_intron MGP_CBAJ_T0045448.1 MGP_CBAJ_G0022973.1 mouse_genomes_project 17 24545091 24546021 + MGP_CBAJ_P0045448 Srrm2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045449.1 MGP_CBAJ_G0022973.1 mouse_genomes_project 17 24545319 24549897 + Srrm2 protein_coding retained_intron MGP_CBAJ_T0045450.1 MGP_CBAJ_G0022973.1 mouse_genomes_project 17 24552712 24555933 + Srrm2 protein_coding processed_transcript MGP_CBAJ_T0045451.1 MGP_CBAJ_G0022973.1 mouse_genomes_project 17 24554791 24556065 + MGP_CBAJ_P0045451 Srrm2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045452.1 MGP_CBAJ_G0022973.1 mouse_genomes_project 17 24556897 24557700 + Srrm2 protein_coding retained_intron MGP_CBAJ_T0045600.1 MGP_CBAJ_G0023014.1 mouse_genomes_project 17 25589463 25600727 - MGP_CBAJ_P0045600 Syngr3 protein_coding protein_coding MGP_CBAJ_T0045601.1 MGP_CBAJ_G0023014.1 mouse_genomes_project 17 25591006 25596176 - Syngr3 protein_coding processed_transcript MGP_CBAJ_T0045347.1 MGP_CBAJ_G0022931.1 mouse_genomes_project 17 21600582 21624671 + MGP_CBAJ_P0045347 Zfp53 protein_coding unknown_likely_coding MGP_CBAJ_T0101698.1 MGP_CBAJ_G0039729.1 mouse_genomes_project 17 21008904 21009328 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047318.1 MGP_CBAJ_G0023428.1 mouse_genomes_project 17 41330371 41331786 + MGP_CBAJ_P0047318 Olfr122 protein_coding protein_coding MGP_CBAJ_T0046032.1 MGP_CBAJ_G0023115.1 mouse_genomes_project 17 28467235 28494521 - MGP_CBAJ_P0046032 Ip6k3 protein_coding protein_coding MGP_CBAJ_T0046849.1 MGP_CBAJ_G0023302.1 mouse_genomes_project 17 37860319 37876855 + MGP_CBAJ_P0046849 Ehmt2 protein_coding protein_coding MGP_CBAJ_T0046850.1 MGP_CBAJ_G0023302.1 mouse_genomes_project 17 37860349 37876851 + MGP_CBAJ_P0046850 Ehmt2 protein_coding protein_coding MGP_CBAJ_T0046851.1 MGP_CBAJ_G0023302.1 mouse_genomes_project 17 37860804 37876848 + MGP_CBAJ_P0046851 Ehmt2 protein_coding protein_coding MGP_CBAJ_T0046852.1 MGP_CBAJ_G0023302.1 mouse_genomes_project 17 37860821 37876855 + MGP_CBAJ_P0046852 Ehmt2 protein_coding protein_coding MGP_CBAJ_T0046853.1 MGP_CBAJ_G0023302.1 mouse_genomes_project 17 37861544 37865452 + Ehmt2 protein_coding processed_transcript MGP_CBAJ_T0046854.1 MGP_CBAJ_G0023302.1 mouse_genomes_project 17 37868034 37869083 + Ehmt2 protein_coding retained_intron MGP_CBAJ_T0046855.1 MGP_CBAJ_G0023302.1 mouse_genomes_project 17 37868071 37868872 + Ehmt2 protein_coding retained_intron MGP_CBAJ_T0046856.1 MGP_CBAJ_G0023302.1 mouse_genomes_project 17 37868741 37869457 + Ehmt2 protein_coding retained_intron MGP_CBAJ_T0046857.1 MGP_CBAJ_G0023302.1 mouse_genomes_project 17 37868833 37871390 + MGP_CBAJ_P0046857 Ehmt2 protein_coding protein_coding MGP_CBAJ_T0046858.1 MGP_CBAJ_G0023302.1 mouse_genomes_project 17 37869575 37871275 + Ehmt2 protein_coding processed_transcript MGP_CBAJ_T0046859.1 MGP_CBAJ_G0023302.1 mouse_genomes_project 17 37870229 37876851 + MGP_CBAJ_P0046859 Ehmt2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046860.1 MGP_CBAJ_G0023302.1 mouse_genomes_project 17 37870231 37871634 + MGP_CBAJ_P0046860 Ehmt2 protein_coding protein_coding MGP_CBAJ_T0046861.1 MGP_CBAJ_G0023302.1 mouse_genomes_project 17 37871476 37874334 + Ehmt2 protein_coding retained_intron MGP_CBAJ_T0046862.1 MGP_CBAJ_G0023302.1 mouse_genomes_project 17 37873806 37876856 + Ehmt2 protein_coding retained_intron MGP_CBAJ_T0047305.1 MGP_CBAJ_G0023417.1 mouse_genomes_project 17 41063222 41065932 - MGP_CBAJ_P0047305 H2-M2 protein_coding protein_coding MGP_CBAJ_T0047306.1 MGP_CBAJ_G0023417.1 mouse_genomes_project 17 41063366 41065933 - MGP_CBAJ_P0047306 H2-M2 protein_coding protein_coding MGP_CBAJ_T0010105.1 MGP_CBAJ_G0008243.1 mouse_genomes_project 17 101105323 101106337 + miRNA miRNA MGP_CBAJ_T0017306.1 MGP_CBAJ_G0015088.1 mouse_genomes_project 17 36335314 36337201 + Gm17251 processed_transcript processed_transcript MGP_CBAJ_T0046794.1 MGP_CBAJ_G0023292.1 mouse_genomes_project 17 37653529 37762724 - MGP_CBAJ_P0046794 Cyp21a1 protein_coding protein_coding MGP_CBAJ_T0046795.1 MGP_CBAJ_G0023292.1 mouse_genomes_project 17 37660486 37661690 - Cyp21a1 protein_coding retained_intron MGP_CBAJ_T0048093.1 MGP_CBAJ_G0023698.1 mouse_genomes_project 17 79083677 79090679 - MGP_CBAJ_P0048093 Tgif1 protein_coding protein_coding MGP_CBAJ_T0048094.1 MGP_CBAJ_G0023698.1 mouse_genomes_project 17 79083677 79089263 - MGP_CBAJ_P0048094 Tgif1 protein_coding protein_coding MGP_CBAJ_T0048095.1 MGP_CBAJ_G0023698.1 mouse_genomes_project 17 79083683 79091229 - MGP_CBAJ_P0048095 Tgif1 protein_coding protein_coding MGP_CBAJ_T0048096.1 MGP_CBAJ_G0023698.1 mouse_genomes_project 17 79083683 79093023 - MGP_CBAJ_P0048096 Tgif1 protein_coding protein_coding MGP_CBAJ_T0048097.1 MGP_CBAJ_G0023698.1 mouse_genomes_project 17 79083683 79090541 - MGP_CBAJ_P0048097 Tgif1 protein_coding protein_coding MGP_CBAJ_T0048098.1 MGP_CBAJ_G0023698.1 mouse_genomes_project 17 79084200 79089263 - MGP_CBAJ_P0048098 Tgif1 protein_coding protein_coding MGP_CBAJ_T0048099.1 MGP_CBAJ_G0023698.1 mouse_genomes_project 17 79084341 79085799 - MGP_CBAJ_P0048099 Tgif1 protein_coding protein_coding MGP_CBAJ_T0048100.1 MGP_CBAJ_G0023698.1 mouse_genomes_project 17 79084453 79086643 - MGP_CBAJ_P0048100 Tgif1 protein_coding protein_coding MGP_CBAJ_T0048101.1 MGP_CBAJ_G0023698.1 mouse_genomes_project 17 79085653 79089117 - MGP_CBAJ_P0048101 Tgif1 protein_coding protein_coding MGP_CBAJ_T0048102.1 MGP_CBAJ_G0023698.1 mouse_genomes_project 17 79085767 79090603 - Tgif1 protein_coding processed_transcript MGP_CBAJ_T0048103.1 MGP_CBAJ_G0023698.1 mouse_genomes_project 17 79086142 79089287 - Tgif1 protein_coding retained_intron MGP_CBAJ_T0048104.1 MGP_CBAJ_G0023698.1 mouse_genomes_project 17 79087846 79089280 - Tgif1 protein_coding processed_transcript MGP_CBAJ_T0045276.1 MGP_CBAJ_G0022886.1 mouse_genomes_project 17 17193171 17194880 + Spaca6 protein_coding processed_transcript MGP_CBAJ_T0045277.1 MGP_CBAJ_G0022886.1 mouse_genomes_project 17 17193345 17194513 + Spaca6 protein_coding retained_intron MGP_CBAJ_T0045278.1 MGP_CBAJ_G0022886.1 mouse_genomes_project 17 17193456 17201542 + MGP_CBAJ_P0045278 Spaca6 protein_coding protein_coding MGP_CBAJ_T0045279.1 MGP_CBAJ_G0022886.1 mouse_genomes_project 17 17193516 17205482 + MGP_CBAJ_P0045279 Spaca6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045280.1 MGP_CBAJ_G0022886.1 mouse_genomes_project 17 17193632 17200959 + Spaca6 protein_coding processed_transcript MGP_CBAJ_T0045281.1 MGP_CBAJ_G0022886.1 mouse_genomes_project 17 17193632 17200959 + Spaca6 protein_coding retained_intron MGP_CBAJ_T0045282.1 MGP_CBAJ_G0022886.1 mouse_genomes_project 17 17193896 17200173 + MGP_CBAJ_P0045282 Spaca6 protein_coding protein_coding MGP_CBAJ_T0045283.1 MGP_CBAJ_G0022886.1 mouse_genomes_project 17 17194481 17198603 + Spaca6 protein_coding retained_intron MGP_CBAJ_T0045284.1 MGP_CBAJ_G0022886.1 mouse_genomes_project 17 17195406 17199475 + Spaca6 protein_coding retained_intron MGP_CBAJ_T0045285.1 MGP_CBAJ_G0022886.1 mouse_genomes_project 17 17198398 17200972 + Spaca6 protein_coding retained_intron MGP_CBAJ_T0045286.1 MGP_CBAJ_G0022886.1 mouse_genomes_project 17 17199953 17201542 + Spaca6 protein_coding retained_intron MGP_CBAJ_T0045287.1 MGP_CBAJ_G0022886.1 mouse_genomes_project 17 17200143 17201538 + MGP_CBAJ_P0045287 Spaca6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045288.1 MGP_CBAJ_G0022886.1 mouse_genomes_project 17 17200730 17201542 + Spaca6 protein_coding retained_intron MGP_CBAJ_T0045289.1 MGP_CBAJ_G0022886.1 mouse_genomes_project 17 17201042 17201542 + Spaca6 protein_coding retained_intron MGP_CBAJ_T0013120.1 MGP_CBAJ_G0011232.1 mouse_genomes_project 17 85309259 85309706 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0047347.1 MGP_CBAJ_G0023451.1 mouse_genomes_project 17 43392642 43395342 + MGP_CBAJ_P0047347 protein_coding protein_coding MGP_CBAJ_T0047963.1 MGP_CBAJ_G0023654.1 mouse_genomes_project 17 63522430 63539385 - MGP_CBAJ_P0047963 protein_coding protein_coding MGP_CBAJ_T0101684.1 MGP_CBAJ_G0039715.1 mouse_genomes_project 17 18608713 18849854 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047214.1 MGP_CBAJ_G0023381.1 mouse_genomes_project 17 39986125 39988297 + MGP_CBAJ_P0047214 H2-M11 protein_coding protein_coding MGP_CBAJ_T0046248.1 MGP_CBAJ_G0023161.1 mouse_genomes_project 17 31099048 31108801 + Pi16 protein_coding retained_intron MGP_CBAJ_T0046249.1 MGP_CBAJ_G0023161.1 mouse_genomes_project 17 31099053 31109319 + MGP_CBAJ_P0046249 Pi16 protein_coding protein_coding MGP_CBAJ_T0046250.1 MGP_CBAJ_G0023161.1 mouse_genomes_project 17 31099368 31108808 + MGP_CBAJ_P0046250 Pi16 protein_coding protein_coding MGP_CBAJ_T0046251.1 MGP_CBAJ_G0023161.1 mouse_genomes_project 17 31099386 31108814 + MGP_CBAJ_P0046251 Pi16 protein_coding protein_coding MGP_CBAJ_T0045933.1 MGP_CBAJ_G0023092.1 mouse_genomes_project 17 27342884 27345973 - MGP_CBAJ_P0045933 Pdia2 protein_coding protein_coding MGP_CBAJ_T0045934.1 MGP_CBAJ_G0023092.1 mouse_genomes_project 17 27342891 27343802 - MGP_CBAJ_P0045934 Pdia2 protein_coding protein_coding MGP_CBAJ_T0045935.1 MGP_CBAJ_G0023092.1 mouse_genomes_project 17 27342910 27345948 - MGP_CBAJ_P0045935 Pdia2 protein_coding protein_coding MGP_CBAJ_T0045937.1 MGP_CBAJ_G0023092.1 mouse_genomes_project 17 27344379 27345894 - MGP_CBAJ_P0045937 Pdia2 protein_coding protein_coding MGP_CBAJ_T0013118.1 MGP_CBAJ_G0011230.1 mouse_genomes_project 17 81721136 81722564 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0003688.1 MGP_CBAJ_G0003319.1 mouse_genomes_project 17 48107478 48110650 - 1700071M16Rik antisense antisense MGP_CBAJ_T0003689.1 MGP_CBAJ_G0003319.1 mouse_genomes_project 17 48107671 48110650 - 1700071M16Rik antisense antisense MGP_CBAJ_T0003690.1 MGP_CBAJ_G0003319.1 mouse_genomes_project 17 48110300 48111573 - 1700071M16Rik antisense antisense MGP_CBAJ_T0003691.1 MGP_CBAJ_G0003319.1 mouse_genomes_project 17 48110300 48111583 - 1700071M16Rik antisense antisense MGP_CBAJ_T0046594.1 MGP_CBAJ_G0023248.1 mouse_genomes_project 17 36574213 36575736 - MGP_CBAJ_P0046594 Pfdn6 protein_coding protein_coding MGP_CBAJ_T0046595.1 MGP_CBAJ_G0023248.1 mouse_genomes_project 17 36574302 36575723 - MGP_CBAJ_P0046595 Pfdn6 protein_coding protein_coding MGP_CBAJ_T0046596.1 MGP_CBAJ_G0023248.1 mouse_genomes_project 17 36574311 36575718 - MGP_CBAJ_P0046596 Pfdn6 protein_coding protein_coding MGP_CBAJ_T0046597.1 MGP_CBAJ_G0023248.1 mouse_genomes_project 17 36574315 36575697 - MGP_CBAJ_P0046597 Pfdn6 protein_coding protein_coding MGP_CBAJ_T0046598.1 MGP_CBAJ_G0023248.1 mouse_genomes_project 17 36574338 36575723 - MGP_CBAJ_P0046598 Pfdn6 protein_coding protein_coding MGP_CBAJ_T0046599.1 MGP_CBAJ_G0023248.1 mouse_genomes_project 17 36574750 36575212 - Pfdn6 protein_coding retained_intron MGP_CBAJ_T0046084.1 MGP_CBAJ_G0023128.1 mouse_genomes_project 17 29364666 29372704 - MGP_CBAJ_P0046084 Taf11 protein_coding protein_coding MGP_CBAJ_T0046085.1 MGP_CBAJ_G0023128.1 mouse_genomes_project 17 29364672 29371185 - MGP_CBAJ_P0046085 Taf11 protein_coding protein_coding MGP_CBAJ_T0046086.1 MGP_CBAJ_G0023128.1 mouse_genomes_project 17 29365206 29366819 - Taf11 protein_coding processed_transcript MGP_CBAJ_T0013038.1 MGP_CBAJ_G0011150.1 mouse_genomes_project 17 11299871 11300616 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0047779.1 MGP_CBAJ_G0023580.1 mouse_genomes_project 17 55028419 55194310 + Kif6 protein_coding retained_intron MGP_CBAJ_T0047780.1 MGP_CBAJ_G0023580.1 mouse_genomes_project 17 55028422 55102516 + MGP_CBAJ_P0047780 Kif6 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047781.1 MGP_CBAJ_G0023580.1 mouse_genomes_project 17 55028455 55375660 + MGP_CBAJ_P0047781 Kif6 protein_coding protein_coding MGP_CBAJ_T0047782.1 MGP_CBAJ_G0023580.1 mouse_genomes_project 17 55144193 55194310 + Kif6 protein_coding retained_intron MGP_CBAJ_T0047783.1 MGP_CBAJ_G0023580.1 mouse_genomes_project 17 55173124 55194312 + Kif6 protein_coding retained_intron MGP_CBAJ_T0047784.1 MGP_CBAJ_G0023580.1 mouse_genomes_project 17 55192832 55197937 + Kif6 protein_coding retained_intron MGP_CBAJ_T0047785.1 MGP_CBAJ_G0023580.1 mouse_genomes_project 17 55348394 55375660 + Kif6 protein_coding retained_intron MGP_CBAJ_T0010068.1 MGP_CBAJ_G0008206.1 mouse_genomes_project 17 28670227 28670288 - Mir7214 miRNA miRNA MGP_CBAJ_T0046087.1 MGP_CBAJ_G0023129.1 mouse_genomes_project 17 29372801 29535449 + MGP_CBAJ_P0046087 Anks1 protein_coding protein_coding MGP_CBAJ_T0046088.1 MGP_CBAJ_G0023129.1 mouse_genomes_project 17 29372833 29535446 + MGP_CBAJ_P0046088 Anks1 protein_coding protein_coding MGP_CBAJ_T0046089.1 MGP_CBAJ_G0023129.1 mouse_genomes_project 17 29372833 29535446 + MGP_CBAJ_P0046089 Anks1 protein_coding protein_coding MGP_CBAJ_T0046090.1 MGP_CBAJ_G0023129.1 mouse_genomes_project 17 29480316 29535448 + Anks1 protein_coding processed_transcript MGP_CBAJ_T0045293.1 MGP_CBAJ_G0022890.1 mouse_genomes_project 17 17253319 17345217 + MGP_CBAJ_P0045293 Fpr3 protein_coding protein_coding MGP_CBAJ_T0045295.1 MGP_CBAJ_G0022890.1 mouse_genomes_project 17 17344010 17345217 + MGP_CBAJ_P0045295 Fpr3 protein_coding protein_coding MGP_CBAJ_T0003715.1 MGP_CBAJ_G0003339.1 mouse_genomes_project 17 97787971 97790260 - Gm15978 antisense antisense MGP_CBAJ_T0046670.1 MGP_CBAJ_G0023262.1 mouse_genomes_project 17 36812830 36821779 + MGP_CBAJ_P0046670 H2-DMa protein_coding unknown_likely_coding MGP_CBAJ_T0046671.1 MGP_CBAJ_G0023262.1 mouse_genomes_project 17 36819718 36820872 + H2-DMa protein_coding retained_intron MGP_CBAJ_T0013127.1 MGP_CBAJ_G0011239.1 mouse_genomes_project 17 95783518 95783858 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0046440.1 MGP_CBAJ_G0023209.1 mouse_genomes_project 17 35159460 35180784 + MGP_CBAJ_P0046440 Cyp4f15 protein_coding protein_coding MGP_CBAJ_T0046441.1 MGP_CBAJ_G0023209.1 mouse_genomes_project 17 35159501 35167298 + Cyp4f15 protein_coding retained_intron MGP_CBAJ_T0046442.1 MGP_CBAJ_G0023209.1 mouse_genomes_project 17 35159504 35174337 + Cyp4f15 protein_coding processed_transcript MGP_CBAJ_T0046443.1 MGP_CBAJ_G0023209.1 mouse_genomes_project 17 35159512 35180784 + MGP_CBAJ_P0046443 Cyp4f15 protein_coding protein_coding MGP_CBAJ_T0048317.1 MGP_CBAJ_G0023779.1 mouse_genomes_project 17 94670077 94699110 + MGP_CBAJ_P0048317 Dync2li1 protein_coding protein_coding MGP_CBAJ_T0047342.1 MGP_CBAJ_G0023446.1 mouse_genomes_project 17 42028998 42029937 + MGP_CBAJ_P0047342 Olfr136 protein_coding protein_coding MGP_CBAJ_T0045081.1 MGP_CBAJ_G0022829.1 mouse_genomes_project 17 5832458 5890106 + MGP_CBAJ_P0045081 protein_coding protein_coding MGP_CBAJ_T0003711.1 MGP_CBAJ_G0003335.1 mouse_genomes_project 17 79093243 79119871 + Gm28727 antisense antisense MGP_CBAJ_T0017330.1 MGP_CBAJ_G0015096.1 mouse_genomes_project 17 79918697 79968162 - Trmt61b processed_transcript processed_transcript MGP_CBAJ_T0017331.1 MGP_CBAJ_G0015096.1 mouse_genomes_project 17 79918732 79968153 - Trmt61b processed_transcript processed_transcript MGP_CBAJ_T0017332.1 MGP_CBAJ_G0015096.1 mouse_genomes_project 17 79951966 79967660 - Trmt61b processed_transcript processed_transcript MGP_CBAJ_T0047755.1 MGP_CBAJ_G0023573.1 mouse_genomes_project 17 53673015 53679956 + MGP_CBAJ_P0047755 Oard1 protein_coding protein_coding MGP_CBAJ_T0047756.1 MGP_CBAJ_G0023573.1 mouse_genomes_project 17 53673081 53679968 + MGP_CBAJ_P0047756 Oard1 protein_coding protein_coding MGP_CBAJ_T0046984.1 MGP_CBAJ_G0023330.1 mouse_genomes_project 17 38164857 38165726 - Aif1 protein_coding retained_intron MGP_CBAJ_T0046985.1 MGP_CBAJ_G0023330.1 mouse_genomes_project 17 38164857 38166687 - MGP_CBAJ_P0046985 Aif1 protein_coding protein_coding MGP_CBAJ_T0046986.1 MGP_CBAJ_G0023330.1 mouse_genomes_project 17 38164858 38171905 - MGP_CBAJ_P0046986 Aif1 protein_coding protein_coding MGP_CBAJ_T0046987.1 MGP_CBAJ_G0023330.1 mouse_genomes_project 17 38164860 38167146 - MGP_CBAJ_P0046987 Aif1 protein_coding protein_coding MGP_CBAJ_T0046988.1 MGP_CBAJ_G0023330.1 mouse_genomes_project 17 38164862 38171972 - Aif1 protein_coding processed_transcript MGP_CBAJ_T0046989.1 MGP_CBAJ_G0023330.1 mouse_genomes_project 17 38165389 38166499 - MGP_CBAJ_P0046989 Aif1 protein_coding protein_coding MGP_CBAJ_T0046990.1 MGP_CBAJ_G0023330.1 mouse_genomes_project 17 38166397 38171905 - Aif1 protein_coding retained_intron MGP_CBAJ_T0003683.1 MGP_CBAJ_G0003314.1 mouse_genomes_project 17 38870678 38879169 + Gm20483 antisense antisense MGP_CBAJ_T0047863.1 MGP_CBAJ_G0023614.1 mouse_genomes_project 17 62340421 62346417 - MGP_CBAJ_P0047863 Plin5 protein_coding protein_coding MGP_CBAJ_T0047864.1 MGP_CBAJ_G0023614.1 mouse_genomes_project 17 62340427 62346119 - MGP_CBAJ_P0047864 Plin5 protein_coding protein_coding MGP_CBAJ_T0047865.1 MGP_CBAJ_G0023614.1 mouse_genomes_project 17 62340849 62346343 - MGP_CBAJ_P0047865 Plin5 protein_coding unknown_likely_coding MGP_CBAJ_T0101739.1 MGP_CBAJ_G0039770.1 mouse_genomes_project 17 40034075 40034222 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0017290.1 MGP_CBAJ_G0015079.1 mouse_genomes_project 17 13929238 13943176 + Gm28869 processed_transcript processed_transcript MGP_CBAJ_T0045339.1 MGP_CBAJ_G0022926.1 mouse_genomes_project 17 21369646 21370767 + MGP_CBAJ_P0045339 Vmn1r236 protein_coding protein_coding MGP_CBAJ_T0045020.1 MGP_CBAJ_G0022805.1 mouse_genomes_project 17 2787334 2788779 - MGP_CBAJ_P0045020 Ldhal6b protein_coding protein_coding MGP_CBAJ_T0100266.1 MGP_CBAJ_G0038521.1 mouse_genomes_project 17 82655478 82655621 + Gm24475 snoRNA snoRNA MGP_CBAJ_T0047017.1 MGP_CBAJ_G0023342.1 mouse_genomes_project 17 38271448 38278357 + MGP_CBAJ_P0047017 H2-Q6 protein_coding protein_coding MGP_CBAJ_T0047215.1 MGP_CBAJ_G0023382.1 mouse_genomes_project 17 40082267 40085648 - MGP_CBAJ_P0047215 H2-M9 protein_coding protein_coding MGP_CBAJ_T0047216.1 MGP_CBAJ_G0023382.1 mouse_genomes_project 17 40083388 40085648 - MGP_CBAJ_P0047216 H2-M9 protein_coding protein_coding MGP_CBAJ_T0010072.1 MGP_CBAJ_G0008210.1 mouse_genomes_project 17 30111641 30111767 + Gm25195 miRNA miRNA MGP_CBAJ_T0045477.1 MGP_CBAJ_G0022984.1 mouse_genomes_project 17 24772234 24775337 - MGP_CBAJ_P0045477 Prss30 protein_coding protein_coding MGP_CBAJ_T0045478.1 MGP_CBAJ_G0022984.1 mouse_genomes_project 17 24772947 24774908 - MGP_CBAJ_P0045478 Prss30 protein_coding protein_coding MGP_CBAJ_T0045479.1 MGP_CBAJ_G0022984.1 mouse_genomes_project 17 24773174 24775281 - Prss30 protein_coding retained_intron MGP_CBAJ_T0045480.1 MGP_CBAJ_G0022984.1 mouse_genomes_project 17 24773198 24774787 - MGP_CBAJ_P0045480 Prss30 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045481.1 MGP_CBAJ_G0022984.1 mouse_genomes_project 17 24773774 24775305 - MGP_CBAJ_P0045481 Prss30 protein_coding protein_coding MGP_CBAJ_T0047932.1 MGP_CBAJ_G0023638.1 mouse_genomes_project 17 63139826 63141785 + Prr22 protein_coding retained_intron MGP_CBAJ_T0047933.1 MGP_CBAJ_G0023638.1 mouse_genomes_project 17 63139852 63141711 + MGP_CBAJ_P0047933 Prr22 protein_coding protein_coding MGP_CBAJ_T0048063.1 MGP_CBAJ_G0023691.1 mouse_genomes_project 17 75521247 75658863 + MGP_CBAJ_P0048063 Lama1 protein_coding protein_coding MGP_CBAJ_T0045317.1 MGP_CBAJ_G0022911.1 mouse_genomes_project 17 20480175 20602363 - MGP_CBAJ_P0045317 protein_coding protein_coding MGP_CBAJ_T0099007.1 MGP_CBAJ_G0037262.1 mouse_genomes_project 17 67362894 67363057 + Gm23447 snRNA snRNA MGP_CBAJ_T0046381.1 MGP_CBAJ_G0023194.1 mouse_genomes_project 17 34139479 34153386 - MGP_CBAJ_P0046381 Sik1 protein_coding protein_coding MGP_CBAJ_T0046793.1 MGP_CBAJ_G0023291.1 mouse_genomes_project 17 37588923 37653805 + MGP_CBAJ_P0046793 Tnxb protein_coding unknown_likely_coding MGP_CBAJ_T0047703.1 MGP_CBAJ_G0023560.1 mouse_genomes_project 17 52943695 52964824 - MGP_CBAJ_P0047703 Mdfi protein_coding protein_coding MGP_CBAJ_T0047704.1 MGP_CBAJ_G0023560.1 mouse_genomes_project 17 52943695 52964874 - MGP_CBAJ_P0047704 Mdfi protein_coding protein_coding MGP_CBAJ_T0047705.1 MGP_CBAJ_G0023560.1 mouse_genomes_project 17 52943695 52966274 - MGP_CBAJ_P0047705 Mdfi protein_coding protein_coding MGP_CBAJ_T0047706.1 MGP_CBAJ_G0023560.1 mouse_genomes_project 17 52944192 52964841 - Mdfi protein_coding processed_transcript MGP_CBAJ_T0047707.1 MGP_CBAJ_G0023560.1 mouse_genomes_project 17 52944310 52964752 - MGP_CBAJ_P0047707 Mdfi protein_coding protein_coding MGP_CBAJ_T0047708.1 MGP_CBAJ_G0023560.1 mouse_genomes_project 17 52948381 52964844 - Mdfi protein_coding retained_intron MGP_CBAJ_T0047709.1 MGP_CBAJ_G0023560.1 mouse_genomes_project 17 52949420 52964855 - MGP_CBAJ_P0047709 Mdfi protein_coding protein_coding MGP_CBAJ_T0047710.1 MGP_CBAJ_G0023560.1 mouse_genomes_project 17 52949509 52964828 - MGP_CBAJ_P0047710 Mdfi protein_coding protein_coding MGP_CBAJ_T0047711.1 MGP_CBAJ_G0023560.1 mouse_genomes_project 17 52956184 52964813 - MGP_CBAJ_P0047711 Mdfi protein_coding protein_coding MGP_CBAJ_T0017285.1 MGP_CBAJ_G0015077.1 mouse_genomes_project 17 9080191 9099163 + Gm16169 processed_transcript antisense MGP_CBAJ_T0017286.1 MGP_CBAJ_G0015077.1 mouse_genomes_project 17 9080196 9088926 + Gm16169 processed_transcript retained_intron MGP_CBAJ_T0047288.1 MGP_CBAJ_G0023401.1 mouse_genomes_project 17 40596512 40597451 - MGP_CBAJ_P0047288 Olfr91 protein_coding protein_coding MGP_CBAJ_T0046464.1 MGP_CBAJ_G0023217.1 mouse_genomes_project 17 35520368 35525791 + Zfp952 protein_coding processed_transcript MGP_CBAJ_T0046465.1 MGP_CBAJ_G0023217.1 mouse_genomes_project 17 35520436 35533650 + Zfp952 protein_coding processed_transcript MGP_CBAJ_T0046466.1 MGP_CBAJ_G0023217.1 mouse_genomes_project 17 35520436 35533650 + MGP_CBAJ_P0046466 Zfp952 protein_coding protein_coding MGP_CBAJ_T0046467.1 MGP_CBAJ_G0023217.1 mouse_genomes_project 17 35520440 35531279 + MGP_CBAJ_P0046467 Zfp952 protein_coding protein_coding MGP_CBAJ_T0003656.1 MGP_CBAJ_G0003295.1 mouse_genomes_project 17 29039663 29041382 + Gm15420 antisense antisense MGP_CBAJ_T0046687.1 MGP_CBAJ_G0023267.1 mouse_genomes_project 17 36940169 36948342 + MGP_CBAJ_P0046687 Psmb8 protein_coding protein_coding MGP_CBAJ_T0046688.1 MGP_CBAJ_G0023267.1 mouse_genomes_project 17 36940238 36948877 + MGP_CBAJ_P0046688 Psmb8 protein_coding protein_coding MGP_CBAJ_T0046689.1 MGP_CBAJ_G0023267.1 mouse_genomes_project 17 36941055 36948847 + Psmb8 protein_coding retained_intron MGP_CBAJ_T0045763.1 MGP_CBAJ_G0023052.1 mouse_genomes_project 17 26356660 26358205 + MGP_CBAJ_P0045763 Tpsb2 protein_coding protein_coding MGP_CBAJ_T0000959.1 MGP_CBAJ_G0000891.1 mouse_genomes_project 17 57533359 57537437 + TEC TEC MGP_CBAJ_T0003633.1 MGP_CBAJ_G0003282.1 mouse_genomes_project 17 8687908 8711822 + A230009B12Rik antisense antisense MGP_CBAJ_T0003634.1 MGP_CBAJ_G0003282.1 mouse_genomes_project 17 8687914 8711458 + A230009B12Rik antisense antisense MGP_CBAJ_T0003635.1 MGP_CBAJ_G0003282.1 mouse_genomes_project 17 8687988 8730937 + A230009B12Rik antisense antisense MGP_CBAJ_T0003636.1 MGP_CBAJ_G0003282.1 mouse_genomes_project 17 8701170 8711457 + A230009B12Rik antisense antisense MGP_CBAJ_T0013040.1 MGP_CBAJ_G0011152.1 mouse_genomes_project 17 11477245 11477782 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0046631.1 MGP_CBAJ_G0023257.1 mouse_genomes_project 17 36697083 36700507 - MGP_CBAJ_P0046631 Slc39a7 protein_coding protein_coding MGP_CBAJ_T0046632.1 MGP_CBAJ_G0023257.1 mouse_genomes_project 17 36697085 36700361 - MGP_CBAJ_P0046632 Slc39a7 protein_coding protein_coding MGP_CBAJ_T0046633.1 MGP_CBAJ_G0023257.1 mouse_genomes_project 17 36697089 36700465 - Slc39a7 protein_coding retained_intron MGP_CBAJ_T0046634.1 MGP_CBAJ_G0023257.1 mouse_genomes_project 17 36698662 36699845 - Slc39a7 protein_coding retained_intron MGP_CBAJ_T0046635.1 MGP_CBAJ_G0023257.1 mouse_genomes_project 17 36698990 36700473 - MGP_CBAJ_P0046635 Slc39a7 protein_coding protein_coding MGP_CBAJ_T0046636.1 MGP_CBAJ_G0023257.1 mouse_genomes_project 17 36699409 36700499 - Slc39a7 protein_coding processed_transcript MGP_CBAJ_T0010054.1 MGP_CBAJ_G0008192.1 mouse_genomes_project 17 24556695 24556774 + Mir5125 miRNA miRNA MGP_CBAJ_T0045546.1 MGP_CBAJ_G0023000.1 mouse_genomes_project 17 25300857 25303136 - Dnase1l2 protein_coding retained_intron MGP_CBAJ_T0045547.1 MGP_CBAJ_G0023000.1 mouse_genomes_project 17 25300863 25304040 - MGP_CBAJ_P0045547 Dnase1l2 protein_coding protein_coding MGP_CBAJ_T0045548.1 MGP_CBAJ_G0023000.1 mouse_genomes_project 17 25301515 25304019 - MGP_CBAJ_P0045548 Dnase1l2 protein_coding protein_coding MGP_CBAJ_T0045549.1 MGP_CBAJ_G0023000.1 mouse_genomes_project 17 25301706 25303088 - MGP_CBAJ_P0045549 Dnase1l2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045550.1 MGP_CBAJ_G0023000.1 mouse_genomes_project 17 25302462 25303636 - MGP_CBAJ_P0045550 Dnase1l2 protein_coding protein_coding MGP_CBAJ_T0045551.1 MGP_CBAJ_G0023000.1 mouse_genomes_project 17 25302660 25304039 - MGP_CBAJ_P0045551 Dnase1l2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046408.1 MGP_CBAJ_G0023202.1 mouse_genomes_project 17 34750011 34783397 - MGP_CBAJ_P0046408 Wiz protein_coding nonsense_mediated_decay MGP_CBAJ_T0046409.1 MGP_CBAJ_G0023202.1 mouse_genomes_project 17 34750012 34784097 - MGP_CBAJ_P0046409 Wiz protein_coding unknown_likely_coding MGP_CBAJ_T0046410.1 MGP_CBAJ_G0023202.1 mouse_genomes_project 17 34750013 34783638 - MGP_CBAJ_P0046410 Wiz protein_coding protein_coding MGP_CBAJ_T0046411.1 MGP_CBAJ_G0023202.1 mouse_genomes_project 17 34750017 34784144 - MGP_CBAJ_P0046411 Wiz protein_coding nonsense_mediated_decay MGP_CBAJ_T0046412.1 MGP_CBAJ_G0023202.1 mouse_genomes_project 17 34750605 34758922 - MGP_CBAJ_P0046412 Wiz protein_coding protein_coding MGP_CBAJ_T0046413.1 MGP_CBAJ_G0023202.1 mouse_genomes_project 17 34750980 34782512 - MGP_CBAJ_P0046413 Wiz protein_coding protein_coding MGP_CBAJ_T0046414.1 MGP_CBAJ_G0023202.1 mouse_genomes_project 17 34757633 34760422 - Wiz protein_coding processed_transcript MGP_CBAJ_T0046415.1 MGP_CBAJ_G0023202.1 mouse_genomes_project 17 34757772 34771091 - Wiz protein_coding retained_intron MGP_CBAJ_T0046416.1 MGP_CBAJ_G0023202.1 mouse_genomes_project 17 34757867 34783339 - MGP_CBAJ_P0046416 Wiz protein_coding protein_coding MGP_CBAJ_T0046417.1 MGP_CBAJ_G0023202.1 mouse_genomes_project 17 34768703 34783479 - Wiz protein_coding retained_intron MGP_CBAJ_T0046418.1 MGP_CBAJ_G0023202.1 mouse_genomes_project 17 34769743 34783703 - MGP_CBAJ_P0046418 Wiz protein_coding nonsense_mediated_decay MGP_CBAJ_T0046419.1 MGP_CBAJ_G0023202.1 mouse_genomes_project 17 34770977 34784129 - MGP_CBAJ_P0046419 Wiz protein_coding nonsense_mediated_decay MGP_CBAJ_T0046420.1 MGP_CBAJ_G0023202.1 mouse_genomes_project 17 34771091 34784154 - Wiz protein_coding retained_intron MGP_CBAJ_T0046421.1 MGP_CBAJ_G0023202.1 mouse_genomes_project 17 34782325 34783869 - MGP_CBAJ_P0046421 Wiz protein_coding protein_coding MGP_CBAJ_T0006896.1 MGP_CBAJ_G0005667.1 mouse_genomes_project 17 106075849 106077483 - lincRNA lincRNA MGP_CBAJ_T0006897.1 MGP_CBAJ_G0005667.1 mouse_genomes_project 17 106077155 106080447 - lincRNA lincRNA MGP_CBAJ_T0047962.1 MGP_CBAJ_G0023653.1 mouse_genomes_project 17 63506791 63514770 - MGP_CBAJ_P0047962 Tubb4a protein_coding protein_coding MGP_CBAJ_T0047218.1 MGP_CBAJ_G0023384.1 mouse_genomes_project 17 40188047 40195085 + MGP_CBAJ_P0047218 H2-M10.5 protein_coding protein_coding MGP_CBAJ_T0046173.1 MGP_CBAJ_G0023145.1 mouse_genomes_project 17 30274217 30342204 - MGP_CBAJ_P0046173 Slc26a8 protein_coding protein_coding MGP_CBAJ_T0046174.1 MGP_CBAJ_G0023145.1 mouse_genomes_project 17 30274602 30334143 - MGP_CBAJ_P0046174 Slc26a8 protein_coding unknown_likely_coding MGP_CBAJ_T0046175.1 MGP_CBAJ_G0023145.1 mouse_genomes_project 17 30274602 30334526 - MGP_CBAJ_P0046175 Slc26a8 protein_coding unknown_likely_coding MGP_CBAJ_T0046176.1 MGP_CBAJ_G0023145.1 mouse_genomes_project 17 30286733 30342204 - Slc26a8 protein_coding retained_intron MGP_CBAJ_T0045596.1 MGP_CBAJ_G0023011.1 mouse_genomes_project 17 25532061 25542934 - MGP_CBAJ_P0045596 Slc9a3r2 protein_coding protein_coding MGP_CBAJ_T0045597.1 MGP_CBAJ_G0023011.1 mouse_genomes_project 17 25532061 25537621 - MGP_CBAJ_P0045597 Slc9a3r2 protein_coding protein_coding MGP_CBAJ_T0046721.1 MGP_CBAJ_G0023278.1 mouse_genomes_project 17 37245072 37251529 - MGP_CBAJ_P0046721 Btnl4 protein_coding protein_coding MGP_CBAJ_T0045055.1 MGP_CBAJ_G0022814.1 mouse_genomes_project 17 4267085 4276485 + MGP_CBAJ_P0045055 protein_coding unknown_likely_coding MGP_CBAJ_T0000954.1 MGP_CBAJ_G0000886.1 mouse_genomes_project 17 57462015 57464001 - TEC TEC MGP_CBAJ_T0047893.1 MGP_CBAJ_G0023626.1 mouse_genomes_project 17 62832183 62833419 - MGP_CBAJ_P0047893 Znrf4 protein_coding protein_coding MGP_CBAJ_T0045635.1 MGP_CBAJ_G0023026.1 mouse_genomes_project 17 25780371 25783896 + MGP_CBAJ_P0045635 Hagh protein_coding protein_coding MGP_CBAJ_T0045636.1 MGP_CBAJ_G0023026.1 mouse_genomes_project 17 25780374 25793913 + MGP_CBAJ_P0045636 Hagh protein_coding protein_coding MGP_CBAJ_T0045637.1 MGP_CBAJ_G0023026.1 mouse_genomes_project 17 25780388 25793916 + MGP_CBAJ_P0045637 Hagh protein_coding protein_coding MGP_CBAJ_T0045638.1 MGP_CBAJ_G0023026.1 mouse_genomes_project 17 25780462 25790703 + MGP_CBAJ_P0045638 Hagh protein_coding protein_coding MGP_CBAJ_T0045639.1 MGP_CBAJ_G0023026.1 mouse_genomes_project 17 25787923 25794070 + Hagh protein_coding processed_transcript MGP_CBAJ_T0101762.1 MGP_CBAJ_G0039793.1 mouse_genomes_project 17 59755244 59755805 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0048000.1 MGP_CBAJ_G0023672.1 mouse_genomes_project 17 71695160 71747179 - MGP_CBAJ_P0048000 Pja2 protein_coding protein_coding MGP_CBAJ_T0048001.1 MGP_CBAJ_G0023672.1 mouse_genomes_project 17 71695161 71728355 - MGP_CBAJ_P0048001 Pja2 protein_coding protein_coding MGP_CBAJ_T0048002.1 MGP_CBAJ_G0023672.1 mouse_genomes_project 17 71695161 71728355 - MGP_CBAJ_P0048002 Pja2 protein_coding protein_coding MGP_CBAJ_T0048003.1 MGP_CBAJ_G0023672.1 mouse_genomes_project 17 71695175 71747128 - MGP_CBAJ_P0048003 Pja2 protein_coding protein_coding MGP_CBAJ_T0048175.1 MGP_CBAJ_G0023722.1 mouse_genomes_project 17 82904592 83019572 - MGP_CBAJ_P0048175 Memo1 protein_coding protein_coding MGP_CBAJ_T0101685.1 MGP_CBAJ_G0039716.1 mouse_genomes_project 17 18706434 18707749 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0048042.1 MGP_CBAJ_G0023685.1 mouse_genomes_project 17 73714111 73749556 + MGP_CBAJ_P0048042 Ddx11 protein_coding protein_coding MGP_CBAJ_T0048043.1 MGP_CBAJ_G0023685.1 mouse_genomes_project 17 73714271 73745768 + MGP_CBAJ_P0048043 Ddx11 protein_coding unknown_likely_coding MGP_CBAJ_T0048206.1 MGP_CBAJ_G0023729.1 mouse_genomes_project 17 83528384 83680120 + MGP_CBAJ_P0048206 Ttc27 protein_coding protein_coding MGP_CBAJ_T0045805.1 MGP_CBAJ_G0023061.1 mouse_genomes_project 17 26779609 26783315 + MGP_CBAJ_P0045805 Rpusd1 protein_coding protein_coding MGP_CBAJ_T0048176.1 MGP_CBAJ_G0023723.1 mouse_genomes_project 17 83027110 83045930 - MGP_CBAJ_P0048176 Dpy30 protein_coding unknown_likely_coding MGP_CBAJ_T0017307.1 MGP_CBAJ_G0015089.1 mouse_genomes_project 17 36694845 36700389 - Gm20427 processed_transcript retained_intron MGP_CBAJ_T0045011.1 MGP_CBAJ_G0022800.1 mouse_genomes_project 17 627833 628493 + MGP_CBAJ_P0045011 Cldn20 protein_coding protein_coding MGP_CBAJ_T0047326.1 MGP_CBAJ_G0023436.1 mouse_genomes_project 17 41729369 41731085 - MGP_CBAJ_P0047326 Olfr129 protein_coding protein_coding MGP_CBAJ_T0047327.1 MGP_CBAJ_G0023436.1 mouse_genomes_project 17 41729369 41735278 - MGP_CBAJ_P0047327 Olfr129 protein_coding protein_coding MGP_CBAJ_T0046162.1 MGP_CBAJ_G0023140.1 mouse_genomes_project 17 30116237 30132843 + MGP_CBAJ_P0046162 Armc12 protein_coding protein_coding MGP_CBAJ_T0003703.1 MGP_CBAJ_G0003329.1 mouse_genomes_project 17 58325525 58336910 - Gm27217 antisense antisense MGP_CBAJ_T0046474.1 MGP_CBAJ_G0023221.1 mouse_genomes_project 17 35671547 35675631 - MGP_CBAJ_P0046474 Morc2b protein_coding protein_coding MGP_CBAJ_T0046475.1 MGP_CBAJ_G0023221.1 mouse_genomes_project 17 35671602 35675447 - MGP_CBAJ_P0046475 Morc2b protein_coding protein_coding MGP_CBAJ_T0003673.1 MGP_CBAJ_G0003306.1 mouse_genomes_project 17 36550830 36551709 - Gm19412 antisense antisense MGP_CBAJ_T0003674.1 MGP_CBAJ_G0003306.1 mouse_genomes_project 17 36551125 36551841 - Gm19412 antisense antisense MGP_CBAJ_T0046468.1 MGP_CBAJ_G0023218.1 mouse_genomes_project 17 35550861 35573194 - MGP_CBAJ_P0046468 Zfp763 protein_coding protein_coding MGP_CBAJ_T0046469.1 MGP_CBAJ_G0023218.1 mouse_genomes_project 17 35553760 35572960 - Zfp763 protein_coding processed_transcript MGP_CBAJ_T0047611.1 MGP_CBAJ_G0023536.1 mouse_genomes_project 17 51708323 51719231 - MGP_CBAJ_P0047611 Rpl7l1 protein_coding protein_coding MGP_CBAJ_T0046674.1 MGP_CBAJ_G0023265.1 mouse_genomes_project 17 36917586 36923351 - MGP_CBAJ_P0046674 Psmb9 protein_coding protein_coding MGP_CBAJ_T0046675.1 MGP_CBAJ_G0023265.1 mouse_genomes_project 17 36917628 36919146 - Psmb9 protein_coding retained_intron MGP_CBAJ_T0046676.1 MGP_CBAJ_G0023265.1 mouse_genomes_project 17 36917631 36922940 - Psmb9 protein_coding retained_intron MGP_CBAJ_T0046677.1 MGP_CBAJ_G0023265.1 mouse_genomes_project 17 36917764 36921385 - MGP_CBAJ_P0046677 Psmb9 protein_coding protein_coding MGP_CBAJ_T0046678.1 MGP_CBAJ_G0023265.1 mouse_genomes_project 17 36919626 36922925 - Psmb9 protein_coding retained_intron MGP_CBAJ_T0046679.1 MGP_CBAJ_G0023265.1 mouse_genomes_project 17 36919878 36922806 - MGP_CBAJ_P0046679 Psmb9 protein_coding protein_coding MGP_CBAJ_T0048173.1 MGP_CBAJ_G0023720.1 mouse_genomes_project 17 82507242 82590325 - MGP_CBAJ_P0048173 Xdh protein_coding protein_coding MGP_CBAJ_T0045617.1 MGP_CBAJ_G0023018.1 mouse_genomes_project 17 25633688 25635905 - MGP_CBAJ_P0045617 Rnf151 protein_coding protein_coding MGP_CBAJ_T0010065.1 MGP_CBAJ_G0008203.1 mouse_genomes_project 17 28217758 28217826 + Mir6968 miRNA miRNA MGP_CBAJ_T0101748.1 MGP_CBAJ_G0039779.1 mouse_genomes_project 17 40808910 40810302 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0010074.1 MGP_CBAJ_G0008212.1 mouse_genomes_project 17 31437132 31437195 + Mir7667 miRNA miRNA MGP_CBAJ_T0047860.1 MGP_CBAJ_G0023612.1 mouse_genomes_project 17 62299490 62324891 + MGP_CBAJ_P0047860 Hdgfrp2 protein_coding protein_coding MGP_CBAJ_T0047861.1 MGP_CBAJ_G0023612.1 mouse_genomes_project 17 62299588 62324900 + MGP_CBAJ_P0047861 Hdgfrp2 protein_coding unknown_likely_coding MGP_CBAJ_T0045978.1 MGP_CBAJ_G0023102.1 mouse_genomes_project 17 27781687 27881233 + MGP_CBAJ_P0045978 Ergic1 protein_coding protein_coding MGP_CBAJ_T0045979.1 MGP_CBAJ_G0023102.1 mouse_genomes_project 17 27781716 27790792 + Ergic1 protein_coding processed_transcript MGP_CBAJ_T0045980.1 MGP_CBAJ_G0023102.1 mouse_genomes_project 17 27781743 27879471 + Ergic1 protein_coding processed_transcript MGP_CBAJ_T0045981.1 MGP_CBAJ_G0023102.1 mouse_genomes_project 17 27838694 27858690 + MGP_CBAJ_P0045981 Ergic1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045982.1 MGP_CBAJ_G0023102.1 mouse_genomes_project 17 27845657 27879471 + Ergic1 protein_coding processed_transcript MGP_CBAJ_T0045983.1 MGP_CBAJ_G0023102.1 mouse_genomes_project 17 27848391 27868115 + Ergic1 protein_coding retained_intron MGP_CBAJ_T0045984.1 MGP_CBAJ_G0023102.1 mouse_genomes_project 17 27862984 27879649 + MGP_CBAJ_P0045984 Ergic1 protein_coding protein_coding MGP_CBAJ_T0006866.1 MGP_CBAJ_G0005646.1 mouse_genomes_project 17 57853659 57869875 + Gm19585 lincRNA lincRNA MGP_CBAJ_T0006867.1 MGP_CBAJ_G0005646.1 mouse_genomes_project 17 57864394 57869670 + Gm19585 lincRNA lincRNA MGP_CBAJ_T0045686.1 MGP_CBAJ_G0023034.1 mouse_genomes_project 17 25913263 25972192 - MGP_CBAJ_P0045686 Cramp1l protein_coding unknown_likely_coding MGP_CBAJ_T0046845.1 MGP_CBAJ_G0023301.1 mouse_genomes_project 17 37841594 37857288 + MGP_CBAJ_P0046845 Zbtb12 protein_coding protein_coding MGP_CBAJ_T0046848.1 MGP_CBAJ_G0023301.1 mouse_genomes_project 17 37856401 37858710 + MGP_CBAJ_P0046848 Zbtb12 protein_coding protein_coding MGP_CBAJ_T0045844.1 MGP_CBAJ_G0023075.1 mouse_genomes_project 17 26900525 26906916 - MGP_CBAJ_P0045844 Rhot2 protein_coding protein_coding MGP_CBAJ_T0045845.1 MGP_CBAJ_G0023075.1 mouse_genomes_project 17 26900902 26903213 - Rhot2 protein_coding retained_intron MGP_CBAJ_T0045846.1 MGP_CBAJ_G0023075.1 mouse_genomes_project 17 26900904 26906528 - Rhot2 protein_coding retained_intron MGP_CBAJ_T0045847.1 MGP_CBAJ_G0023075.1 mouse_genomes_project 17 26901338 26902664 - Rhot2 protein_coding retained_intron MGP_CBAJ_T0045848.1 MGP_CBAJ_G0023075.1 mouse_genomes_project 17 26902118 26903727 - Rhot2 protein_coding processed_transcript MGP_CBAJ_T0045849.1 MGP_CBAJ_G0023075.1 mouse_genomes_project 17 26903320 26904119 - Rhot2 protein_coding retained_intron MGP_CBAJ_T0045850.1 MGP_CBAJ_G0023075.1 mouse_genomes_project 17 26903401 26905202 - Rhot2 protein_coding retained_intron MGP_CBAJ_T0045851.1 MGP_CBAJ_G0023075.1 mouse_genomes_project 17 26903450 26904171 - Rhot2 protein_coding retained_intron MGP_CBAJ_T0045852.1 MGP_CBAJ_G0023075.1 mouse_genomes_project 17 26903624 26906371 - Rhot2 protein_coding retained_intron MGP_CBAJ_T0045853.1 MGP_CBAJ_G0023075.1 mouse_genomes_project 17 26903632 26905208 - Rhot2 protein_coding retained_intron MGP_CBAJ_T0045854.1 MGP_CBAJ_G0023075.1 mouse_genomes_project 17 26903669 26906383 - Rhot2 protein_coding retained_intron MGP_CBAJ_T0045855.1 MGP_CBAJ_G0023075.1 mouse_genomes_project 17 26903824 26906482 - MGP_CBAJ_P0045855 Rhot2 protein_coding protein_coding MGP_CBAJ_T0045856.1 MGP_CBAJ_G0023075.1 mouse_genomes_project 17 26904160 26906511 - Rhot2 protein_coding retained_intron MGP_CBAJ_T0045857.1 MGP_CBAJ_G0023075.1 mouse_genomes_project 17 26904316 26906590 - MGP_CBAJ_P0045857 Rhot2 protein_coding protein_coding MGP_CBAJ_T0045858.1 MGP_CBAJ_G0023075.1 mouse_genomes_project 17 26904320 26906634 - Rhot2 protein_coding processed_transcript MGP_CBAJ_T0045859.1 MGP_CBAJ_G0023075.1 mouse_genomes_project 17 26904446 26906607 - Rhot2 protein_coding processed_transcript MGP_CBAJ_T0045860.1 MGP_CBAJ_G0023075.1 mouse_genomes_project 17 26905839 26906595 - Rhot2 protein_coding retained_intron MGP_CBAJ_T0047341.1 MGP_CBAJ_G0023445.1 mouse_genomes_project 17 41990289 41991229 - MGP_CBAJ_P0047341 Olfr137 protein_coding protein_coding MGP_CBAJ_T0013125.1 MGP_CBAJ_G0011237.1 mouse_genomes_project 17 91491555 91491934 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0045024.1 MGP_CBAJ_G0022807.1 mouse_genomes_project 17 3296252 3408455 + MGP_CBAJ_P0045024 Snx9 protein_coding protein_coding MGP_CBAJ_T0045365.1 MGP_CBAJ_G0022941.1 mouse_genomes_project 17 22099812 22689518 - MGP_CBAJ_P0045365 Zfp942 protein_coding protein_coding MGP_CBAJ_T0045824.1 MGP_CBAJ_G0023068.1 mouse_genomes_project 17 26853852 26856327 - MGP_CBAJ_P0045824 Metrn protein_coding protein_coding MGP_CBAJ_T0045825.1 MGP_CBAJ_G0023068.1 mouse_genomes_project 17 26854228 26856418 - MGP_CBAJ_P0045825 Metrn protein_coding protein_coding MGP_CBAJ_T0047053.1 MGP_CBAJ_G0023353.1 mouse_genomes_project 17 38874439 38888493 - MGP_CBAJ_P0047053 Vars2 protein_coding protein_coding MGP_CBAJ_T0047054.1 MGP_CBAJ_G0023353.1 mouse_genomes_project 17 38874460 38884550 - Vars2 protein_coding retained_intron MGP_CBAJ_T0047055.1 MGP_CBAJ_G0023353.1 mouse_genomes_project 17 38875192 38881754 - MGP_CBAJ_P0047055 Vars2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047056.1 MGP_CBAJ_G0023353.1 mouse_genomes_project 17 38875359 38881296 - MGP_CBAJ_P0047056 Vars2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047057.1 MGP_CBAJ_G0023353.1 mouse_genomes_project 17 38875429 38877218 - Vars2 protein_coding retained_intron MGP_CBAJ_T0047058.1 MGP_CBAJ_G0023353.1 mouse_genomes_project 17 38875545 38876320 - Vars2 protein_coding retained_intron MGP_CBAJ_T0047059.1 MGP_CBAJ_G0023353.1 mouse_genomes_project 17 38878357 38878852 - Vars2 protein_coding retained_intron MGP_CBAJ_T0047060.1 MGP_CBAJ_G0023353.1 mouse_genomes_project 17 38878489 38880771 - MGP_CBAJ_P0047060 Vars2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047061.1 MGP_CBAJ_G0023353.1 mouse_genomes_project 17 38878830 38880450 - Vars2 protein_coding retained_intron MGP_CBAJ_T0047062.1 MGP_CBAJ_G0023353.1 mouse_genomes_project 17 38882714 38887638 - Vars2 protein_coding retained_intron MGP_CBAJ_T0047063.1 MGP_CBAJ_G0023353.1 mouse_genomes_project 17 38884404 38888441 - Vars2 protein_coding retained_intron MGP_CBAJ_T0047064.1 MGP_CBAJ_G0023353.1 mouse_genomes_project 17 38884488 38888450 - MGP_CBAJ_P0047064 Vars2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048181.1 MGP_CBAJ_G0023727.1 mouse_genomes_project 17 83259749 83279275 + MGP_CBAJ_P0048181 Yipf4 protein_coding protein_coding MGP_CBAJ_T0048172.1 MGP_CBAJ_G0023719.1 mouse_genomes_project 17 82422977 82450156 + MGP_CBAJ_P0048172 Ehd3 protein_coding protein_coding MGP_CBAJ_T0098994.1 MGP_CBAJ_G0037249.1 mouse_genomes_project 17 38033146 38033250 + Gm23421 snRNA snRNA MGP_CBAJ_T0010071.1 MGP_CBAJ_G0008209.1 mouse_genomes_project 17 28716878 28716937 + Mir7218 miRNA miRNA MGP_CBAJ_T0003687.1 MGP_CBAJ_G0003318.1 mouse_genomes_project 17 40392373 40402090 + 1700031A10Rik antisense antisense MGP_CBAJ_T0046243.1 MGP_CBAJ_G0023160.1 mouse_genomes_project 17 31036459 31075454 + MGP_CBAJ_P0046243 BC004004 protein_coding protein_coding MGP_CBAJ_T0046244.1 MGP_CBAJ_G0023160.1 mouse_genomes_project 17 31036514 31074094 + MGP_CBAJ_P0046244 BC004004 protein_coding protein_coding MGP_CBAJ_T0046245.1 MGP_CBAJ_G0023160.1 mouse_genomes_project 17 31036622 31056004 + BC004004 protein_coding retained_intron MGP_CBAJ_T0046246.1 MGP_CBAJ_G0023160.1 mouse_genomes_project 17 31044860 31074098 + MGP_CBAJ_P0046246 BC004004 protein_coding protein_coding MGP_CBAJ_T0046247.1 MGP_CBAJ_G0023160.1 mouse_genomes_project 17 31069068 31074098 + BC004004 protein_coding processed_transcript MGP_CBAJ_T0047673.1 MGP_CBAJ_G0023555.1 mouse_genomes_project 17 52786690 52794544 - MGP_CBAJ_P0047673 Prickle4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048346.1 MGP_CBAJ_G0023791.1 mouse_genomes_project 17 96820036 96827575 - MGP_CBAJ_P0048346 Gm10309 protein_coding protein_coding MGP_CBAJ_T0098296.1 MGP_CBAJ_G0036563.1 mouse_genomes_project 17 82231199 82235827 - D630014O11Rik sense_intronic sense_intronic MGP_CBAJ_T0006831.1 MGP_CBAJ_G0005620.1 mouse_genomes_project 17 33829181 33831166 + 4833413E03Rik lincRNA lincRNA MGP_CBAJ_T0006832.1 MGP_CBAJ_G0005620.1 mouse_genomes_project 17 33830247 33831169 + 4833413E03Rik lincRNA lincRNA MGP_CBAJ_T0046552.1 MGP_CBAJ_G0023241.1 mouse_genomes_project 17 36409309 36427932 + MGP_CBAJ_P0046552 Ndufa7 protein_coding protein_coding MGP_CBAJ_T0046553.1 MGP_CBAJ_G0023241.1 mouse_genomes_project 17 36409312 36410842 + Ndufa7 protein_coding retained_intron MGP_CBAJ_T0046554.1 MGP_CBAJ_G0023241.1 mouse_genomes_project 17 36409322 36427925 + MGP_CBAJ_P0046554 Ndufa7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0046555.1 MGP_CBAJ_G0023241.1 mouse_genomes_project 17 36409363 36410565 + Ndufa7 protein_coding retained_intron MGP_CBAJ_T0046556.1 MGP_CBAJ_G0023241.1 mouse_genomes_project 17 36409763 36427798 + Ndufa7 protein_coding processed_transcript MGP_CBAJ_T0046557.1 MGP_CBAJ_G0023241.1 mouse_genomes_project 17 36410339 36427802 + Ndufa7 protein_coding processed_transcript MGP_CBAJ_T0046558.1 MGP_CBAJ_G0023241.1 mouse_genomes_project 17 36413842 36427925 + Ndufa7 protein_coding processed_transcript MGP_CBAJ_T0046559.1 MGP_CBAJ_G0023241.1 mouse_genomes_project 17 36414077 36427910 + Ndufa7 protein_coding processed_transcript MGP_CBAJ_T0046560.1 MGP_CBAJ_G0023241.1 mouse_genomes_project 17 36414111 36427930 + Ndufa7 protein_coding retained_intron MGP_CBAJ_T0013080.1 MGP_CBAJ_G0011192.1 mouse_genomes_project 17 40699592 40700189 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0045759.1 MGP_CBAJ_G0023049.1 mouse_genomes_project 17 26289804 26293041 + MGP_CBAJ_P0045759 Prss28 protein_coding protein_coding MGP_CBAJ_T0013062.1 MGP_CBAJ_G0011174.1 mouse_genomes_project 17 37161165 37161453 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010104.1 MGP_CBAJ_G0008242.1 mouse_genomes_project 17 87602524 87602608 + Gm25069 miRNA miRNA MGP_CBAJ_T0045861.1 MGP_CBAJ_G0023076.1 mouse_genomes_project 17 26906835 26926776 - Wdr90 protein_coding retained_intron MGP_CBAJ_T0045862.1 MGP_CBAJ_G0023076.1 mouse_genomes_project 17 26906835 26926868 - MGP_CBAJ_P0045862 Wdr90 protein_coding protein_coding MGP_CBAJ_T0045863.1 MGP_CBAJ_G0023076.1 mouse_genomes_project 17 26906835 26926853 - MGP_CBAJ_P0045863 Wdr90 protein_coding unknown_likely_coding MGP_CBAJ_T0045864.1 MGP_CBAJ_G0023076.1 mouse_genomes_project 17 26906837 26926861 - Wdr90 protein_coding retained_intron MGP_CBAJ_T0045865.1 MGP_CBAJ_G0023076.1 mouse_genomes_project 17 26907132 26926894 - MGP_CBAJ_P0045865 Wdr90 protein_coding protein_coding MGP_CBAJ_T0045866.1 MGP_CBAJ_G0023076.1 mouse_genomes_project 17 26907452 26908559 - Wdr90 protein_coding retained_intron MGP_CBAJ_T0045867.1 MGP_CBAJ_G0023076.1 mouse_genomes_project 17 26910633 26913825 - Wdr90 protein_coding retained_intron MGP_CBAJ_T0045868.1 MGP_CBAJ_G0023076.1 mouse_genomes_project 17 26912017 26913932 - Wdr90 protein_coding retained_intron MGP_CBAJ_T0045869.1 MGP_CBAJ_G0023076.1 mouse_genomes_project 17 26913975 26915955 - Wdr90 protein_coding retained_intron MGP_CBAJ_T0045870.1 MGP_CBAJ_G0023076.1 mouse_genomes_project 17 26915399 26926868 - Wdr90 protein_coding retained_intron MGP_CBAJ_T0045871.1 MGP_CBAJ_G0023076.1 mouse_genomes_project 17 26915889 26920655 - Wdr90 protein_coding retained_intron MGP_CBAJ_T0045872.1 MGP_CBAJ_G0023076.1 mouse_genomes_project 17 26921139 26924619 - MGP_CBAJ_P0045872 Wdr90 protein_coding protein_coding MGP_CBAJ_T0101751.1 MGP_CBAJ_G0039782.1 mouse_genomes_project 17 40954922 40955849 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0046166.1 MGP_CBAJ_G0023143.1 mouse_genomes_project 17 30180477 30191182 + MGP_CBAJ_P0046166 Lhfpl5 protein_coding protein_coding MGP_CBAJ_T0010062.1 MGP_CBAJ_G0008200.1 mouse_genomes_project 17 26893434 26893498 - Mir3082 miRNA miRNA MGP_CBAJ_T0047961.1 MGP_CBAJ_G0023652.1 mouse_genomes_project 17 63488252 63505236 - MGP_CBAJ_P0047961 Dennd1c protein_coding protein_coding MGP_CBAJ_T0101723.1 MGP_CBAJ_G0039754.1 mouse_genomes_project 17 39404735 39405318 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0101709.1 MGP_CBAJ_G0039740.1 mouse_genomes_project 17 36535588 36535978 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0046229.1 MGP_CBAJ_G0023156.1 mouse_genomes_project 17 30842559 30853142 + MGP_CBAJ_P0046229 Cdkn1a protein_coding protein_coding MGP_CBAJ_T0046230.1 MGP_CBAJ_G0023156.1 mouse_genomes_project 17 30845345 30854337 + MGP_CBAJ_P0046230 Cdkn1a protein_coding protein_coding MGP_CBAJ_T0046231.1 MGP_CBAJ_G0023156.1 mouse_genomes_project 17 30851837 30853184 + MGP_CBAJ_P0046231 Cdkn1a protein_coding protein_coding MGP_CBAJ_T0101761.1 MGP_CBAJ_G0039792.1 mouse_genomes_project 17 59670350 59670970 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047353.1 MGP_CBAJ_G0023457.1 mouse_genomes_project 17 44667562 44678029 + MGP_CBAJ_P0047353 Esp8 protein_coding protein_coding MGP_CBAJ_T0048285.1 MGP_CBAJ_G0023765.1 mouse_genomes_project 17 90583470 90640642 + MGP_CBAJ_P0048285 Tmem178 protein_coding protein_coding MGP_CBAJ_T0046311.1 MGP_CBAJ_G0023175.1 mouse_genomes_project 17 32628213 32652432 - MGP_CBAJ_P0046311 Glo1 protein_coding protein_coding MGP_CBAJ_T0045025.1 MGP_CBAJ_G0022808.1 mouse_genomes_project 17 3424271 3528856 + MGP_CBAJ_P0045025 Synj2 protein_coding protein_coding MGP_CBAJ_T0045026.1 MGP_CBAJ_G0022808.1 mouse_genomes_project 17 3424271 3534619 + MGP_CBAJ_P0045026 Synj2 protein_coding protein_coding MGP_CBAJ_T0045027.1 MGP_CBAJ_G0022808.1 mouse_genomes_project 17 3424327 3535455 + MGP_CBAJ_P0045027 Synj2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0045028.1 MGP_CBAJ_G0022808.1 mouse_genomes_project 17 3424352 3534619 + MGP_CBAJ_P0045028 Synj2 protein_coding protein_coding MGP_CBAJ_T0045029.1 MGP_CBAJ_G0022808.1 mouse_genomes_project 17 3465822 3522347 + MGP_CBAJ_P0045029 Synj2 protein_coding protein_coding MGP_CBAJ_T0045030.1 MGP_CBAJ_G0022808.1 mouse_genomes_project 17 3465877 3540354 + MGP_CBAJ_P0045030 Synj2 protein_coding protein_coding MGP_CBAJ_T0045031.1 MGP_CBAJ_G0022808.1 mouse_genomes_project 17 3465976 3534619 + MGP_CBAJ_P0045031 Synj2 protein_coding protein_coding MGP_CBAJ_T0045032.1 MGP_CBAJ_G0022808.1 mouse_genomes_project 17 3478220 3535406 + MGP_CBAJ_P0045032 Synj2 protein_coding protein_coding MGP_CBAJ_T0045033.1 MGP_CBAJ_G0022808.1 mouse_genomes_project 17 3480297 3540354 + MGP_CBAJ_P0045033 Synj2 protein_coding protein_coding MGP_CBAJ_T0045034.1 MGP_CBAJ_G0022808.1 mouse_genomes_project 17 3485953 3534392 + MGP_CBAJ_P0045034 Synj2 protein_coding protein_coding MGP_CBAJ_T0045035.1 MGP_CBAJ_G0022808.1 mouse_genomes_project 17 3486783 3513800 + MGP_CBAJ_P0045035 Synj2 protein_coding protein_coding MGP_CBAJ_T0045036.1 MGP_CBAJ_G0022808.1 mouse_genomes_project 17 3499656 3528992 + MGP_CBAJ_P0045036 Synj2 protein_coding protein_coding MGP_CBAJ_T0045037.1 MGP_CBAJ_G0022808.1 mouse_genomes_project 17 3499673 3534470 + MGP_CBAJ_P0045037 Synj2 protein_coding protein_coding MGP_CBAJ_T0045038.1 MGP_CBAJ_G0022808.1 mouse_genomes_project 17 3499688 3502567 + Synj2 protein_coding processed_transcript MGP_CBAJ_T0045039.1 MGP_CBAJ_G0022808.1 mouse_genomes_project 17 3506867 3534437 + MGP_CBAJ_P0045039 Synj2 protein_coding protein_coding MGP_CBAJ_T0045040.1 MGP_CBAJ_G0022808.1 mouse_genomes_project 17 3521132 3533526 + MGP_CBAJ_P0045040 Synj2 protein_coding protein_coding MGP_CBAJ_T0045012.1 MGP_CBAJ_G0022801.1 mouse_genomes_project 17 746341 814038 - MGP_CBAJ_P0045012 Nox3 protein_coding protein_coding MGP_CBAJ_T0047354.1 MGP_CBAJ_G0023458.1 mouse_genomes_project 17 44706534 44710645 + MGP_CBAJ_P0047354 Esp6 protein_coding protein_coding MGP_CBAJ_T0046813.1 MGP_CBAJ_G0023296.1 mouse_genomes_project 17 37799903 37810885 - Skiv2l protein_coding retained_intron MGP_CBAJ_T0046814.1 MGP_CBAJ_G0023296.1 mouse_genomes_project 17 37799919 37810885 - MGP_CBAJ_P0046814 Skiv2l protein_coding protein_coding MGP_CBAJ_T0046815.1 MGP_CBAJ_G0023296.1 mouse_genomes_project 17 37799924 37810867 - Skiv2l protein_coding retained_intron MGP_CBAJ_T0046816.1 MGP_CBAJ_G0023296.1 mouse_genomes_project 17 37799972 37810873 - Skiv2l protein_coding retained_intron MGP_CBAJ_T0046817.1 MGP_CBAJ_G0023296.1 mouse_genomes_project 17 37801205 37801804 - Skiv2l protein_coding retained_intron MGP_CBAJ_T0046818.1 MGP_CBAJ_G0023296.1 mouse_genomes_project 17 37801277 37803541 - MGP_CBAJ_P0046818 Skiv2l protein_coding protein_coding MGP_CBAJ_T0046819.1 MGP_CBAJ_G0023296.1 mouse_genomes_project 17 37802031 37805132 - Skiv2l protein_coding retained_intron MGP_CBAJ_T0046820.1 MGP_CBAJ_G0023296.1 mouse_genomes_project 17 37805702 37807869 - Skiv2l protein_coding retained_intron MGP_CBAJ_T0046821.1 MGP_CBAJ_G0023296.1 mouse_genomes_project 17 37805779 37807315 - Skiv2l protein_coding retained_intron MGP_CBAJ_T0046822.1 MGP_CBAJ_G0023296.1 mouse_genomes_project 17 37805915 37806707 - Skiv2l protein_coding retained_intron MGP_CBAJ_T0046823.1 MGP_CBAJ_G0023296.1 mouse_genomes_project 17 37807197 37810870 - MGP_CBAJ_P0046823 Skiv2l protein_coding nonsense_mediated_decay MGP_CBAJ_T0047676.1 MGP_CBAJ_G0023556.1 mouse_genomes_project 17 52788469 52791462 - MGP_CBAJ_P0047676 protein_coding protein_coding MGP_CBAJ_T0047677.1 MGP_CBAJ_G0023556.1 mouse_genomes_project 17 52788469 52792452 - MGP_CBAJ_P0047677 protein_coding protein_coding MGP_CBAJ_T0047678.1 MGP_CBAJ_G0023556.1 mouse_genomes_project 17 52788571 52790882 - protein_coding retained_intron MGP_CBAJ_T0047680.1 MGP_CBAJ_G0023556.1 mouse_genomes_project 17 52789530 52791389 - MGP_CBAJ_P0047680 protein_coding protein_coding MGP_CBAJ_T0047681.1 MGP_CBAJ_G0023556.1 mouse_genomes_project 17 52792201 52794825 - protein_coding retained_intron MGP_CBAJ_T0046945.1 MGP_CBAJ_G0023323.1 mouse_genomes_project 17 38098014 38099497 - MGP_CBAJ_P0046945 Ly6g5b protein_coding protein_coding MGP_CBAJ_T0046946.1 MGP_CBAJ_G0023323.1 mouse_genomes_project 17 38098048 38099497 - MGP_CBAJ_P0046946 Ly6g5b protein_coding protein_coding MGP_CBAJ_T0045041.1 MGP_CBAJ_G0022809.1 mouse_genomes_project 17 3538259 3575492 - MGP_CBAJ_P0045041 Serac1 protein_coding protein_coding MGP_CBAJ_T0045042.1 MGP_CBAJ_G0022809.1 mouse_genomes_project 17 3539967 3546104 - Serac1 protein_coding processed_transcript MGP_CBAJ_T0045043.1 MGP_CBAJ_G0022809.1 mouse_genomes_project 17 3540129 3575478 - MGP_CBAJ_P0045043 Serac1 protein_coding protein_coding MGP_CBAJ_T0045044.1 MGP_CBAJ_G0022809.1 mouse_genomes_project 17 3546075 3547437 - Serac1 protein_coding retained_intron MGP_CBAJ_T0045045.1 MGP_CBAJ_G0022809.1 mouse_genomes_project 17 3560784 3575484 - Serac1 protein_coding processed_transcript MGP_CBAJ_T0045554.1 MGP_CBAJ_G0023002.1 mouse_genomes_project 17 25336806 25337925 + MGP_CBAJ_P0045554 Pgp protein_coding protein_coding MGP_CBAJ_T0010064.1 MGP_CBAJ_G0008202.1 mouse_genomes_project 17 28207698 28207756 + Gm27740 miRNA miRNA MGP_CBAJ_T0003660.1 MGP_CBAJ_G0003299.1 mouse_genomes_project 17 30594908 30596412 + 1700030A11Rik antisense antisense MGP_CBAJ_T0047252.1 MGP_CBAJ_G0023395.1 mouse_genomes_project 17 40453014 40456540 - MGP_CBAJ_P0047252 2410137M14Rik protein_coding protein_coding MGP_CBAJ_T0047253.1 MGP_CBAJ_G0023395.1 mouse_genomes_project 17 40453151 40456520 - MGP_CBAJ_P0047253 2410137M14Rik protein_coding protein_coding MGP_CBAJ_T0045023.1 MGP_CBAJ_G0022806.1 mouse_genomes_project 17 2879005 3176180 + MGP_CBAJ_P0045023 Zdhhc14 protein_coding protein_coding MGP_CBAJ_T0048060.1 MGP_CBAJ_G0023689.1 mouse_genomes_project 17 74344860 75124259 - MGP_CBAJ_P0048060 Ptprm protein_coding protein_coding MGP_CBAJ_T0048061.1 MGP_CBAJ_G0023689.1 mouse_genomes_project 17 74467746 75123829 - MGP_CBAJ_P0048061 Ptprm protein_coding unknown_likely_coding MGP_CBAJ_T0045467.1 MGP_CBAJ_G0022981.1 mouse_genomes_project 17 24692689 24694744 + MGP_CBAJ_P0045467 protein_coding protein_coding MGP_CBAJ_T0048004.1 MGP_CBAJ_G0023673.1 mouse_genomes_project 17 72061509 72229779 + MGP_CBAJ_P0048004 Man2a1 protein_coding protein_coding MGP_CBAJ_T0048005.1 MGP_CBAJ_G0023673.1 mouse_genomes_project 17 72184075 72185458 + Man2a1 protein_coding retained_intron MGP_CBAJ_T0048006.1 MGP_CBAJ_G0023673.1 mouse_genomes_project 17 72184274 72229507 + MGP_CBAJ_P0048006 Man2a1 protein_coding protein_coding MGP_CBAJ_T0047826.1 MGP_CBAJ_G0023596.1 mouse_genomes_project 17 61634033 61671781 + MGP_CBAJ_P0047826 St6gal2 protein_coding protein_coding MGP_CBAJ_T0047827.1 MGP_CBAJ_G0023596.1 mouse_genomes_project 17 61634040 61688248 + MGP_CBAJ_P0047827 St6gal2 protein_coding protein_coding MGP_CBAJ_T0047828.1 MGP_CBAJ_G0023596.1 mouse_genomes_project 17 61634201 61707278 + MGP_CBAJ_P0047828 St6gal2 protein_coding protein_coding MGP_CBAJ_T0047829.1 MGP_CBAJ_G0023596.1 mouse_genomes_project 17 61634897 61671117 + St6gal2 protein_coding processed_transcript MGP_CBAJ_T0045340.1 MGP_CBAJ_G0022927.1 mouse_genomes_project 17 21401277 21402227 + MGP_CBAJ_P0045340 Vmn1r237 protein_coding protein_coding MGP_CBAJ_T0048278.1 MGP_CBAJ_G0023761.1 mouse_genomes_project 17 89963941 90060821 - MGP_CBAJ_P0048278 Sos1 protein_coding protein_coding MGP_CBAJ_T0048279.1 MGP_CBAJ_G0023761.1 mouse_genomes_project 17 89969243 90060291 - MGP_CBAJ_P0048279 Sos1 protein_coding unknown_likely_coding MGP_CBAJ_T0045769.1 MGP_CBAJ_G0023054.1 mouse_genomes_project 17 26364154 26438038 - MGP_CBAJ_P0045769 Cacna1h protein_coding protein_coding MGP_CBAJ_T0045770.1 MGP_CBAJ_G0023054.1 mouse_genomes_project 17 26364155 26437832 - MGP_CBAJ_P0045770 Cacna1h protein_coding unknown_likely_coding MGP_CBAJ_T0045771.1 MGP_CBAJ_G0023054.1 mouse_genomes_project 17 26364157 26438038 - MGP_CBAJ_P0045771 Cacna1h protein_coding protein_coding MGP_CBAJ_T0045772.1 MGP_CBAJ_G0023054.1 mouse_genomes_project 17 26364164 26438038 - MGP_CBAJ_P0045772 Cacna1h protein_coding protein_coding MGP_CBAJ_T0045773.1 MGP_CBAJ_G0023054.1 mouse_genomes_project 17 26366757 26373551 - MGP_CBAJ_P0045773 Cacna1h protein_coding protein_coding MGP_CBAJ_T0045774.1 MGP_CBAJ_G0023054.1 mouse_genomes_project 17 26367069 26373179 - MGP_CBAJ_P0045774 Cacna1h protein_coding nonsense_mediated_decay MGP_CBAJ_T0045775.1 MGP_CBAJ_G0023054.1 mouse_genomes_project 17 26367424 26368803 - Cacna1h protein_coding retained_intron MGP_CBAJ_T0045776.1 MGP_CBAJ_G0023054.1 mouse_genomes_project 17 26381144 26382379 - Cacna1h protein_coding retained_intron MGP_CBAJ_T0045777.1 MGP_CBAJ_G0023054.1 mouse_genomes_project 17 26385167 26438023 - Cacna1h protein_coding retained_intron MGP_CBAJ_T0045778.1 MGP_CBAJ_G0023054.1 mouse_genomes_project 17 26390545 26437533 - MGP_CBAJ_P0045778 Cacna1h protein_coding protein_coding MGP_CBAJ_T0045779.1 MGP_CBAJ_G0023054.1 mouse_genomes_project 17 26436088 26438038 - Cacna1h protein_coding retained_intron MGP_CBAJ_T0000951.1 MGP_CBAJ_G0000883.1 mouse_genomes_project 17 57415044 57418200 - TEC TEC MGP_CBAJ_T0046582.1 MGP_CBAJ_G0023247.1 mouse_genomes_project 17 36561086 36562040 + Rgl2 protein_coding retained_intron MGP_CBAJ_T0046583.1 MGP_CBAJ_G0023247.1 mouse_genomes_project 17 36561125 36572525 + MGP_CBAJ_P0046583 Rgl2 protein_coding protein_coding MGP_CBAJ_T0046584.1 MGP_CBAJ_G0023247.1 mouse_genomes_project 17 36561447 36563761 + Rgl2 protein_coding processed_transcript MGP_CBAJ_T0046585.1 MGP_CBAJ_G0023247.1 mouse_genomes_project 17 36561517 36563927 + Rgl2 protein_coding retained_intron MGP_CBAJ_T0046586.1 MGP_CBAJ_G0023247.1 mouse_genomes_project 17 36562433 36563584 + Rgl2 protein_coding retained_intron MGP_CBAJ_T0046587.1 MGP_CBAJ_G0023247.1 mouse_genomes_project 17 36562442 36564067 + Rgl2 protein_coding processed_transcript MGP_CBAJ_T0046588.1 MGP_CBAJ_G0023247.1 mouse_genomes_project 17 36562458 36563501 + Rgl2 protein_coding retained_intron MGP_CBAJ_T0046589.1 MGP_CBAJ_G0023247.1 mouse_genomes_project 17 36562760 36564057 + Rgl2 protein_coding retained_intron MGP_CBAJ_T0046590.1 MGP_CBAJ_G0023247.1 mouse_genomes_project 17 36563606 36564778 + Rgl2 protein_coding retained_intron MGP_CBAJ_T0046591.1 MGP_CBAJ_G0023247.1 mouse_genomes_project 17 36563685 36564701 + Rgl2 protein_coding retained_intron MGP_CBAJ_T0046592.1 MGP_CBAJ_G0023247.1 mouse_genomes_project 17 36565485 36572062 + MGP_CBAJ_P0046592 Rgl2 protein_coding protein_coding MGP_CBAJ_T0046593.1 MGP_CBAJ_G0023247.1 mouse_genomes_project 17 36566882 36571728 + Rgl2 protein_coding retained_intron MGP_CBAJ_T0045630.1 MGP_CBAJ_G0023022.1 mouse_genomes_project 17 25657134 25666804 + MGP_CBAJ_P0045630 Msrb1 protein_coding protein_coding MGP_CBAJ_T0045631.1 MGP_CBAJ_G0023022.1 mouse_genomes_project 17 25657174 25666797 + MGP_CBAJ_P0045631 Msrb1 protein_coding protein_coding MGP_CBAJ_T0047840.1 MGP_CBAJ_G0023606.1 mouse_genomes_project 17 62184527 62199153 + MGP_CBAJ_P0047840 Fsd1 protein_coding protein_coding MGP_CBAJ_T0046097.1 MGP_CBAJ_G0023131.1 mouse_genomes_project 17 29638234 29671066 + MGP_CBAJ_P0046097 Scube3 protein_coding protein_coding MGP_CBAJ_T0046098.1 MGP_CBAJ_G0023131.1 mouse_genomes_project 17 29648347 29667728 + Scube3 protein_coding processed_transcript MGP_CBAJ_T0046099.1 MGP_CBAJ_G0023131.1 mouse_genomes_project 17 29649796 29666359 + MGP_CBAJ_P0046099 Scube3 protein_coding protein_coding MGP_CBAJ_T0046100.1 MGP_CBAJ_G0023131.1 mouse_genomes_project 17 29656974 29669241 + Scube3 protein_coding processed_transcript MGP_CBAJ_T0046101.1 MGP_CBAJ_G0023131.1 mouse_genomes_project 17 29662022 29663862 + Scube3 protein_coding retained_intron MGP_CBAJ_T0047552.1 MGP_CBAJ_G0023515.1 mouse_genomes_project 17 51260638 51296953 + MGP_CBAJ_P0047552 Zfp318 protein_coding protein_coding MGP_CBAJ_T0047553.1 MGP_CBAJ_G0023515.1 mouse_genomes_project 17 51260658 51303056 + MGP_CBAJ_P0047553 Zfp318 protein_coding protein_coding MGP_CBAJ_T0047554.1 MGP_CBAJ_G0023515.1 mouse_genomes_project 17 51282201 51292856 + MGP_CBAJ_P0047554 Zfp318 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047555.1 MGP_CBAJ_G0023515.1 mouse_genomes_project 17 51288004 51291499 + Zfp318 protein_coding retained_intron MGP_CBAJ_T0047556.1 MGP_CBAJ_G0023515.1 mouse_genomes_project 17 51291766 51293459 + Zfp318 protein_coding retained_intron MGP_CBAJ_T0047392.1 MGP_CBAJ_G0023479.1 mouse_genomes_project 17 48135539 48150455 - MGP_CBAJ_P0047392 Tdrd6 protein_coding protein_coding MGP_CBAJ_T0047393.1 MGP_CBAJ_G0023479.1 mouse_genomes_project 17 48135543 48150455 - MGP_CBAJ_P0047393 Tdrd6 protein_coding protein_coding MGP_CBAJ_T0047394.1 MGP_CBAJ_G0023479.1 mouse_genomes_project 17 48135763 48140685 - Tdrd6 protein_coding processed_transcript MGP_CBAJ_T0047395.1 MGP_CBAJ_G0023479.1 mouse_genomes_project 17 48136049 48150338 - MGP_CBAJ_P0047395 Tdrd6 protein_coding unknown_likely_coding MGP_CBAJ_T0045781.1 MGP_CBAJ_G0023056.1 mouse_genomes_project 17 26509720 26517137 - MGP_CBAJ_P0045781 Sstr5 protein_coding protein_coding MGP_CBAJ_T0045782.1 MGP_CBAJ_G0023056.1 mouse_genomes_project 17 26509720 26517137 - MGP_CBAJ_P0045782 Sstr5 protein_coding protein_coding MGP_CBAJ_T0010084.1 MGP_CBAJ_G0008222.1 mouse_genomes_project 17 38201811 38201889 + Mir6973a miRNA miRNA MGP_CBAJ_T0046044.1 MGP_CBAJ_G0023119.1 mouse_genomes_project 17 28943634 28953782 + MGP_CBAJ_P0046044 protein_coding protein_coding MGP_CBAJ_T0046045.1 MGP_CBAJ_G0023119.1 mouse_genomes_project 17 28953038 28953158 + MGP_CBAJ_P0046045 protein_coding protein_coding MGP_CBAJ_T0017280.1 MGP_CBAJ_G0015075.1 mouse_genomes_project 17 6245082 6269365 - 4930506C21Rik processed_transcript processed_transcript MGP_CBAJ_T0017281.1 MGP_CBAJ_G0015075.1 mouse_genomes_project 17 6248675 6250139 - 4930506C21Rik processed_transcript processed_transcript MGP_CBAJ_T0017282.1 MGP_CBAJ_G0015075.1 mouse_genomes_project 17 6249390 6269393 - 4930506C21Rik processed_transcript retained_intron MGP_CBAJ_T0045095.1 MGP_CBAJ_G0022834.1 mouse_genomes_project 17 6234779 6248608 + MGP_CBAJ_P0045095 Mpc1 protein_coding protein_coding MGP_CBAJ_T0045096.1 MGP_CBAJ_G0022834.1 mouse_genomes_project 17 6235667 6245350 + Mpc1 protein_coding retained_intron MGP_CBAJ_T0045097.1 MGP_CBAJ_G0022834.1 mouse_genomes_project 17 6235723 6248994 + MGP_CBAJ_P0045097 Mpc1 protein_coding protein_coding MGP_CBAJ_T0045098.1 MGP_CBAJ_G0022834.1 mouse_genomes_project 17 6236325 6249138 + MGP_CBAJ_P0045098 Mpc1 protein_coding protein_coding MGP_CBAJ_T0045099.1 MGP_CBAJ_G0022834.1 mouse_genomes_project 17 6247830 6248873 + Mpc1 protein_coding retained_intron MGP_CBAJ_T0045100.1 MGP_CBAJ_G0022834.1 mouse_genomes_project 17 6248092 6249138 + MGP_CBAJ_P0045100 Mpc1 protein_coding protein_coding MGP_CBAJ_T0045974.1 MGP_CBAJ_G0023100.1 mouse_genomes_project 17 27710575 27713505 - MGP_CBAJ_P0045974 Dusp1 protein_coding protein_coding MGP_CBAJ_T0045975.1 MGP_CBAJ_G0023100.1 mouse_genomes_project 17 27710576 27713460 - Dusp1 protein_coding retained_intron MGP_CBAJ_T0045976.1 MGP_CBAJ_G0023100.1 mouse_genomes_project 17 27711501 27712709 - Dusp1 protein_coding retained_intron MGP_CBAJ_T0010078.1 MGP_CBAJ_G0008216.1 mouse_genomes_project 17 36693806 36693916 - Mir219a-1 miRNA miRNA MGP_CBAJ_T0045235.1 MGP_CBAJ_G0022875.1 mouse_genomes_project 17 14257851 14266484 - MGP_CBAJ_P0045235 Dll1 protein_coding protein_coding MGP_CBAJ_T0045236.1 MGP_CBAJ_G0022875.1 mouse_genomes_project 17 14258022 14258888 - Dll1 protein_coding retained_intron MGP_CBAJ_T0045237.1 MGP_CBAJ_G0022875.1 mouse_genomes_project 17 14260755 14262339 - Dll1 protein_coding processed_transcript MGP_CBAJ_T0045238.1 MGP_CBAJ_G0022875.1 mouse_genomes_project 17 14261108 14264580 - Dll1 protein_coding processed_transcript MGP_CBAJ_T0045239.1 MGP_CBAJ_G0022875.1 mouse_genomes_project 17 14262131 14265608 - Dll1 protein_coding retained_intron MGP_CBAJ_T0045240.1 MGP_CBAJ_G0022875.1 mouse_genomes_project 17 14265301 14270055 - Dll1 protein_coding processed_transcript MGP_CBAJ_T0047770.1 MGP_CBAJ_G0023578.1 mouse_genomes_project 17 54822925 54834211 + MGP_CBAJ_P0047770 Mocs1 protein_coding protein_coding MGP_CBAJ_T0047771.1 MGP_CBAJ_G0023578.1 mouse_genomes_project 17 54823005 54843468 + MGP_CBAJ_P0047771 Mocs1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047772.1 MGP_CBAJ_G0023578.1 mouse_genomes_project 17 54823005 54843468 + MGP_CBAJ_P0047772 Mocs1 protein_coding protein_coding MGP_CBAJ_T0047773.1 MGP_CBAJ_G0023578.1 mouse_genomes_project 17 54823005 54843468 + MGP_CBAJ_P0047773 Mocs1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0047774.1 MGP_CBAJ_G0023578.1 mouse_genomes_project 17 54827699 54830024 + Mocs1 protein_coding processed_transcript MGP_CBAJ_T0047775.1 MGP_CBAJ_G0023578.1 mouse_genomes_project 17 54838614 54842946 + MGP_CBAJ_P0047775 Mocs1 protein_coding protein_coding MGP_CBAJ_T0047776.1 MGP_CBAJ_G0023578.1 mouse_genomes_project 17 54841066 54844159 + MGP_CBAJ_P0047776 Mocs1 protein_coding protein_coding MGP_CBAJ_T0045873.1 MGP_CBAJ_G0023077.1 mouse_genomes_project 17 26932314 26941143 - MGP_CBAJ_P0045873 Fam195a protein_coding protein_coding MGP_CBAJ_T0047295.1 MGP_CBAJ_G0023408.1 mouse_genomes_project 17 40788240 40791942 - MGP_CBAJ_P0047295 Olfr97 protein_coding protein_coding MGP_CBAJ_T0046796.1 MGP_CBAJ_G0023293.1 mouse_genomes_project 17 37767371 37768138 - protein_coding retained_intron MGP_CBAJ_T0045310.1 MGP_CBAJ_G0022904.1 mouse_genomes_project 17 19978164 19999748 - MGP_CBAJ_P0045310 Vmn2r104 protein_coding protein_coding MGP_CBAJ_T0046784.1 MGP_CBAJ_G0023288.1 mouse_genomes_project 17 37557811 37561408 + MGP_CBAJ_P0046784 Prrt1 protein_coding protein_coding MGP_CBAJ_T0046785.1 MGP_CBAJ_G0023288.1 mouse_genomes_project 17 37559681 37560679 + Prrt1 protein_coding retained_intron MGP_CBAJ_T0047425.1 MGP_CBAJ_G0023488.1 mouse_genomes_project 17 50116288 50163478 - MGP_CBAJ_P0047425 Cdc5l protein_coding protein_coding MGP_CBAJ_T0006834.1 MGP_CBAJ_G0005622.1 mouse_genomes_project 17 34666470 34695032 + lincRNA lincRNA MGP_CBAJ_T0047941.1 MGP_CBAJ_G0023644.1 mouse_genomes_project 17 63398098 63404192 + MGP_CBAJ_P0047941 Clpp protein_coding protein_coding MGP_CBAJ_T0101692.1 MGP_CBAJ_G0039723.1 mouse_genomes_project 17 20035919 20095558 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0048414.1 MGP_CBAJ_G0023812.1 mouse_genomes_project 17 99482406 99537955 - MGP_CBAJ_P0048414 Lhcgr protein_coding protein_coding MGP_CBAJ_T0101693.1 MGP_CBAJ_G0039724.1 mouse_genomes_project 17 20315985 20324012 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0047369.1 MGP_CBAJ_G0023468.1 mouse_genomes_project 17 46666198 46881164 + MGP_CBAJ_P0047369 Ptchd4 protein_coding protein_coding MGP_CBAJ_T0047291.1 MGP_CBAJ_G0023404.1 mouse_genomes_project 17 40742679 40744883 + MGP_CBAJ_P0047291 Ubd protein_coding protein_coding MGP_CBAJ_T0048331.1 MGP_CBAJ_G0023783.1 mouse_genomes_project 17 95060251 95127197 + MGP_CBAJ_P0048331 protein_coding protein_coding MGP_CBAJ_T0013039.1 MGP_CBAJ_G0011151.1 mouse_genomes_project 17 11300897 11302022 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0046437.1 MGP_CBAJ_G0023207.1 mouse_genomes_project 17 34959599 35097738 + protein_coding retained_intron MGP_CBAJ_T0046438.1 MGP_CBAJ_G0023207.1 mouse_genomes_project 17 34970356 35059518 + protein_coding retained_intron MGP_CBAJ_T0049016.1 MGP_CBAJ_G0024010.1 mouse_genomes_project 18 37844750 37945878 + MGP_CBAJ_P0049016 Pcdhac1 protein_coding protein_coding MGP_CBAJ_T0013141.1 MGP_CBAJ_G0011253.1 mouse_genomes_project 18 10064417 10066260 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003761.1 MGP_CBAJ_G0003373.1 mouse_genomes_project 18 79778212 79788365 - antisense antisense MGP_CBAJ_T0003762.1 MGP_CBAJ_G0003373.1 mouse_genomes_project 18 79778325 79788347 - antisense antisense MGP_CBAJ_T0049501.1 MGP_CBAJ_G0024213.1 mouse_genomes_project 18 69715304 69832212 + MGP_CBAJ_P0049501 Zfp532 protein_coding protein_coding MGP_CBAJ_T0049502.1 MGP_CBAJ_G0024213.1 mouse_genomes_project 18 69715456 69758964 + MGP_CBAJ_P0049502 Zfp532 protein_coding protein_coding MGP_CBAJ_T0049503.1 MGP_CBAJ_G0024213.1 mouse_genomes_project 18 69716161 69758953 + MGP_CBAJ_P0049503 Zfp532 protein_coding protein_coding MGP_CBAJ_T0049504.1 MGP_CBAJ_G0024213.1 mouse_genomes_project 18 69716167 69758521 + MGP_CBAJ_P0049504 Zfp532 protein_coding protein_coding MGP_CBAJ_T0049505.1 MGP_CBAJ_G0024213.1 mouse_genomes_project 18 69716817 69760779 + MGP_CBAJ_P0049505 Zfp532 protein_coding protein_coding MGP_CBAJ_T0049506.1 MGP_CBAJ_G0024213.1 mouse_genomes_project 18 69717302 69759100 + MGP_CBAJ_P0049506 Zfp532 protein_coding protein_coding MGP_CBAJ_T0049507.1 MGP_CBAJ_G0024213.1 mouse_genomes_project 18 69717357 69758528 + MGP_CBAJ_P0049507 Zfp532 protein_coding protein_coding MGP_CBAJ_T0049508.1 MGP_CBAJ_G0024213.1 mouse_genomes_project 18 69717481 69831710 + MGP_CBAJ_P0049508 Zfp532 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049509.1 MGP_CBAJ_G0024213.1 mouse_genomes_project 18 69717589 69831709 + MGP_CBAJ_P0049509 Zfp532 protein_coding protein_coding MGP_CBAJ_T0049510.1 MGP_CBAJ_G0024213.1 mouse_genomes_project 18 69717676 69758727 + MGP_CBAJ_P0049510 Zfp532 protein_coding protein_coding MGP_CBAJ_T0049511.1 MGP_CBAJ_G0024213.1 mouse_genomes_project 18 69718001 69831703 + MGP_CBAJ_P0049511 Zfp532 protein_coding protein_coding MGP_CBAJ_T0049512.1 MGP_CBAJ_G0024213.1 mouse_genomes_project 18 69718476 69758693 + MGP_CBAJ_P0049512 Zfp532 protein_coding protein_coding MGP_CBAJ_T0049513.1 MGP_CBAJ_G0024213.1 mouse_genomes_project 18 69718998 69758638 + MGP_CBAJ_P0049513 Zfp532 protein_coding protein_coding MGP_CBAJ_T0049514.1 MGP_CBAJ_G0024213.1 mouse_genomes_project 18 69755008 69760371 + Zfp532 protein_coding retained_intron MGP_CBAJ_T0049515.1 MGP_CBAJ_G0024213.1 mouse_genomes_project 18 69760684 69825706 + Zfp532 protein_coding retained_intron MGP_CBAJ_T0049516.1 MGP_CBAJ_G0024213.1 mouse_genomes_project 18 69783009 69828391 + Zfp532 protein_coding processed_transcript MGP_CBAJ_T0049532.1 MGP_CBAJ_G0024219.1 mouse_genomes_project 18 70172221 70196979 - MGP_CBAJ_P0049532 Lman1 protein_coding protein_coding MGP_CBAJ_T0049533.1 MGP_CBAJ_G0024219.1 mouse_genomes_project 18 70174663 70196963 - MGP_CBAJ_P0049533 Lman1 protein_coding protein_coding MGP_CBAJ_T0049534.1 MGP_CBAJ_G0024219.1 mouse_genomes_project 18 70183374 70189249 - Lman1 protein_coding processed_transcript MGP_CBAJ_T0049535.1 MGP_CBAJ_G0024219.1 mouse_genomes_project 18 70185497 70188006 - Lman1 protein_coding retained_intron MGP_CBAJ_T0049536.1 MGP_CBAJ_G0024219.1 mouse_genomes_project 18 70187483 70224102 - MGP_CBAJ_P0049536 Lman1 protein_coding protein_coding MGP_CBAJ_T0049537.1 MGP_CBAJ_G0024219.1 mouse_genomes_project 18 70187936 70217571 - Lman1 protein_coding processed_transcript MGP_CBAJ_T0049471.1 MGP_CBAJ_G0024202.1 mouse_genomes_project 18 66788487 67214756 - MGP_CBAJ_P0049471 Piezo2 protein_coding protein_coding MGP_CBAJ_T0049472.1 MGP_CBAJ_G0024202.1 mouse_genomes_project 18 66788490 66808562 - MGP_CBAJ_P0049472 Piezo2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049473.1 MGP_CBAJ_G0024202.1 mouse_genomes_project 18 66789822 67052887 - MGP_CBAJ_P0049473 Piezo2 protein_coding unknown_likely_coding MGP_CBAJ_T0049474.1 MGP_CBAJ_G0024202.1 mouse_genomes_project 18 66797185 66806233 - Piezo2 protein_coding retained_intron MGP_CBAJ_T0049475.1 MGP_CBAJ_G0024202.1 mouse_genomes_project 18 66797631 66814850 - Piezo2 protein_coding retained_intron MGP_CBAJ_T0049476.1 MGP_CBAJ_G0024202.1 mouse_genomes_project 18 66844811 67214030 - MGP_CBAJ_P0049476 Piezo2 protein_coding protein_coding MGP_CBAJ_T0049477.1 MGP_CBAJ_G0024202.1 mouse_genomes_project 18 66864691 66933824 - MGP_CBAJ_P0049477 Piezo2 protein_coding protein_coding MGP_CBAJ_T0049478.1 MGP_CBAJ_G0024202.1 mouse_genomes_project 18 66894393 66972202 - MGP_CBAJ_P0049478 Piezo2 protein_coding protein_coding MGP_CBAJ_T0049479.1 MGP_CBAJ_G0024202.1 mouse_genomes_project 18 66894443 67214756 - MGP_CBAJ_P0049479 Piezo2 protein_coding protein_coding MGP_CBAJ_T0049480.1 MGP_CBAJ_G0024202.1 mouse_genomes_project 18 66910644 67214742 - Piezo2 protein_coding retained_intron MGP_CBAJ_T0048751.1 MGP_CBAJ_G0023908.1 mouse_genomes_project 18 24506676 24555734 - MGP_CBAJ_P0048751 Tpgs2 protein_coding protein_coding MGP_CBAJ_T0048752.1 MGP_CBAJ_G0023908.1 mouse_genomes_project 18 24515457 24556047 - MGP_CBAJ_P0048752 Tpgs2 protein_coding protein_coding MGP_CBAJ_T0100278.1 MGP_CBAJ_G0038533.1 mouse_genomes_project 18 26013737 26013868 + Gm23674 snoRNA snoRNA MGP_CBAJ_T0003732.1 MGP_CBAJ_G0003352.1 mouse_genomes_project 18 37691407 37693145 - antisense antisense MGP_CBAJ_T0098492.1 MGP_CBAJ_G0036749.1 mouse_genomes_project 18 87067869 87079321 - Gm27238 sense_overlapping sense_overlapping MGP_CBAJ_T0010111.1 MGP_CBAJ_G0008249.1 mouse_genomes_project 18 5906174 5906278 - Gm26119 miRNA miRNA MGP_CBAJ_T0011322.1 MGP_CBAJ_G0009460.1 mouse_genomes_project 18 18479499 18479796 + Gm25392 misc_RNA misc_RNA MGP_CBAJ_T0003734.1 MGP_CBAJ_G0003354.1 mouse_genomes_project 18 37767197 37780764 - Gm10545 antisense antisense MGP_CBAJ_T0048581.1 MGP_CBAJ_G0023841.1 mouse_genomes_project 18 6922856 6926726 - MGP_CBAJ_P0048581 Cetn1 protein_coding protein_coding MGP_CBAJ_T0003743.1 MGP_CBAJ_G0003363.1 mouse_genomes_project 18 40400324 40422678 - Gm15337 antisense antisense MGP_CBAJ_T0006943.1 MGP_CBAJ_G0005701.1 mouse_genomes_project 18 72293215 72294361 - Gm26910 lincRNA lincRNA MGP_CBAJ_T0049443.1 MGP_CBAJ_G0024188.1 mouse_genomes_project 18 65341439 65355297 - MGP_CBAJ_P0049443 Grpel2 protein_coding protein_coding MGP_CBAJ_T0100296.1 MGP_CBAJ_G0038551.1 mouse_genomes_project 18 71945075 71945209 + Gm24900 snoRNA snoRNA MGP_CBAJ_T0049245.1 MGP_CBAJ_G0024115.1 mouse_genomes_project 18 48432575 48443422 - MGP_CBAJ_P0049245 Atg12 protein_coding protein_coding MGP_CBAJ_T0049491.1 MGP_CBAJ_G0024209.1 mouse_genomes_project 18 68473753 68622159 - MGP_CBAJ_P0049491 Atp8b1 protein_coding protein_coding MGP_CBAJ_T0048582.1 MGP_CBAJ_G0023842.1 mouse_genomes_project 18 7031696 7230821 + MGP_CBAJ_P0048582 Colec12 protein_coding protein_coding MGP_CBAJ_T0049418.1 MGP_CBAJ_G0024180.1 mouse_genomes_project 18 64648825 64699110 - MGP_CBAJ_P0049418 Hmgxb3 protein_coding protein_coding MGP_CBAJ_T0100275.1 MGP_CBAJ_G0038530.1 mouse_genomes_project 18 14104468 14104597 + Gm24228 snoRNA snoRNA MGP_CBAJ_T0100300.1 MGP_CBAJ_G0038555.1 mouse_genomes_project 18 80318237 80318302 + Gm26202 snoRNA snoRNA MGP_CBAJ_T0049388.1 MGP_CBAJ_G0024171.1 mouse_genomes_project 18 64274540 64278686 + MGP_CBAJ_P0049388 Rps14 protein_coding protein_coding MGP_CBAJ_T0049389.1 MGP_CBAJ_G0024171.1 mouse_genomes_project 18 64274696 64277571 + Rps14 protein_coding retained_intron MGP_CBAJ_T0049390.1 MGP_CBAJ_G0024171.1 mouse_genomes_project 18 64274711 64278681 + MGP_CBAJ_P0049390 Rps14 protein_coding protein_coding MGP_CBAJ_T0049391.1 MGP_CBAJ_G0024171.1 mouse_genomes_project 18 64275259 64278012 + MGP_CBAJ_P0049391 Rps14 protein_coding protein_coding MGP_CBAJ_T0049392.1 MGP_CBAJ_G0024171.1 mouse_genomes_project 18 64275865 64278597 + MGP_CBAJ_P0049392 Rps14 protein_coding protein_coding MGP_CBAJ_T0049393.1 MGP_CBAJ_G0024171.1 mouse_genomes_project 18 64276388 64278685 + MGP_CBAJ_P0049393 Rps14 protein_coding protein_coding MGP_CBAJ_T0049667.1 MGP_CBAJ_G0024252.1 mouse_genomes_project 18 78777205 78839972 - MGP_CBAJ_P0049667 Smad4 protein_coding protein_coding MGP_CBAJ_T0049668.1 MGP_CBAJ_G0024252.1 mouse_genomes_project 18 78778192 78822293 - MGP_CBAJ_P0049668 Smad4 protein_coding protein_coding MGP_CBAJ_T0049669.1 MGP_CBAJ_G0024252.1 mouse_genomes_project 18 78778349 78780820 - Smad4 protein_coding processed_transcript MGP_CBAJ_T0049670.1 MGP_CBAJ_G0024252.1 mouse_genomes_project 18 78778403 78788297 - Smad4 protein_coding processed_transcript MGP_CBAJ_T0049671.1 MGP_CBAJ_G0024252.1 mouse_genomes_project 18 78778414 78806882 - Smad4 protein_coding processed_transcript MGP_CBAJ_T0049672.1 MGP_CBAJ_G0024252.1 mouse_genomes_project 18 78802874 78819213 - Smad4 protein_coding processed_transcript MGP_CBAJ_T0100295.1 MGP_CBAJ_G0038550.1 mouse_genomes_project 18 67372801 67372945 + Gm22210 snoRNA snoRNA MGP_CBAJ_T0006921.1 MGP_CBAJ_G0005685.1 mouse_genomes_project 18 35231607 35240055 - Gm26538 lincRNA lincRNA MGP_CBAJ_T0010135.1 MGP_CBAJ_G0008273.1 mouse_genomes_project 18 63635356 63635466 + Gm23576 miRNA miRNA MGP_CBAJ_T0048864.1 MGP_CBAJ_G0023952.1 mouse_genomes_project 18 35209755 35276397 + MGP_CBAJ_P0048864 Kdm3b protein_coding protein_coding MGP_CBAJ_T0049213.1 MGP_CBAJ_G0024102.1 mouse_genomes_project 18 45784102 45814685 + MGP_CBAJ_P0049213 Myot protein_coding protein_coding MGP_CBAJ_T0049214.1 MGP_CBAJ_G0024102.1 mouse_genomes_project 18 45784102 45814685 + MGP_CBAJ_P0049214 Myot protein_coding protein_coding MGP_CBAJ_T0013168.1 MGP_CBAJ_G0011280.1 mouse_genomes_project 18 46823383 46823659 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0049461.1 MGP_CBAJ_G0024200.1 mouse_genomes_project 18 66688255 66722802 + MGP_CBAJ_P0049461 Apcdd1 protein_coding protein_coding MGP_CBAJ_T0049462.1 MGP_CBAJ_G0024200.1 mouse_genomes_project 18 66688257 66722071 + MGP_CBAJ_P0049462 Apcdd1 protein_coding protein_coding MGP_CBAJ_T0048714.1 MGP_CBAJ_G0023893.1 mouse_genomes_project 18 22638236 22899547 + MGP_CBAJ_P0048714 Dtna protein_coding protein_coding MGP_CBAJ_T0048715.1 MGP_CBAJ_G0023893.1 mouse_genomes_project 18 22638236 22842343 + MGP_CBAJ_P0048715 Dtna protein_coding protein_coding MGP_CBAJ_T0048716.1 MGP_CBAJ_G0023893.1 mouse_genomes_project 18 22859473 22873134 + MGP_CBAJ_P0048716 Dtna protein_coding unknown_likely_coding MGP_CBAJ_T0048659.1 MGP_CBAJ_G0023865.1 mouse_genomes_project 18 10887406 10905627 + MGP_CBAJ_P0048659 Hrh4 protein_coding protein_coding MGP_CBAJ_T0097999.1 MGP_CBAJ_G0036272.1 mouse_genomes_project 18 67346138 67346258 + Gm22560 rRNA rRNA MGP_CBAJ_T0048788.1 MGP_CBAJ_G0023924.1 mouse_genomes_project 18 32118240 32195550 - MGP_CBAJ_P0048788 Myo7b protein_coding protein_coding MGP_CBAJ_T0048913.1 MGP_CBAJ_G0023966.1 mouse_genomes_project 18 36203472 36208360 - MGP_CBAJ_P0048913 Prob1 protein_coding protein_coding MGP_CBAJ_T0048914.1 MGP_CBAJ_G0023966.1 mouse_genomes_project 18 36203476 36205128 - Prob1 protein_coding processed_transcript MGP_CBAJ_T0048915.1 MGP_CBAJ_G0023966.1 mouse_genomes_project 18 36205288 36208309 - MGP_CBAJ_P0048915 Prob1 protein_coding protein_coding MGP_CBAJ_T0048616.1 MGP_CBAJ_G0023856.1 mouse_genomes_project 18 9890920 9919537 + MGP_CBAJ_P0048616 Riok3 protein_coding protein_coding MGP_CBAJ_T0048877.1 MGP_CBAJ_G0023960.1 mouse_genomes_project 18 36078156 36078967 + MGP_CBAJ_P0048877 Gm5239 protein_coding protein_coding MGP_CBAJ_T0048683.1 MGP_CBAJ_G0023879.1 mouse_genomes_project 18 19423764 19461592 + MGP_CBAJ_P0048683 Dsg3 protein_coding protein_coding MGP_CBAJ_T0049864.1 MGP_CBAJ_G0024314.1 mouse_genomes_project 18 91347082 91378204 + MGP_CBAJ_P0049864 Cyb5a protein_coding protein_coding MGP_CBAJ_T0049865.1 MGP_CBAJ_G0024314.1 mouse_genomes_project 18 91347121 91377395 + MGP_CBAJ_P0049865 Cyb5a protein_coding nonsense_mediated_decay MGP_CBAJ_T0049866.1 MGP_CBAJ_G0024314.1 mouse_genomes_project 18 91347151 91371385 + Cyb5a protein_coding retained_intron MGP_CBAJ_T0049867.1 MGP_CBAJ_G0024314.1 mouse_genomes_project 18 91347623 91377665 + MGP_CBAJ_P0049867 Cyb5a protein_coding protein_coding MGP_CBAJ_T0049868.1 MGP_CBAJ_G0024314.1 mouse_genomes_project 18 91375403 91377667 + Cyb5a protein_coding retained_intron MGP_CBAJ_T0099040.1 MGP_CBAJ_G0037295.1 mouse_genomes_project 18 57914836 57914916 + Gm22597 snRNA snRNA MGP_CBAJ_T0013169.1 MGP_CBAJ_G0011281.1 mouse_genomes_project 18 48122072 48122648 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010124.1 MGP_CBAJ_G0008262.1 mouse_genomes_project 18 37542409 37542519 + Gm23424 miRNA miRNA MGP_CBAJ_T0049463.1 MGP_CBAJ_G0024201.1 mouse_genomes_project 18 66749950 66775679 + MGP_CBAJ_P0049463 Napg protein_coding protein_coding MGP_CBAJ_T0049464.1 MGP_CBAJ_G0024201.1 mouse_genomes_project 18 66749975 66752768 + Napg protein_coding retained_intron MGP_CBAJ_T0049465.1 MGP_CBAJ_G0024201.1 mouse_genomes_project 18 66750015 66773161 + MGP_CBAJ_P0049465 Napg protein_coding protein_coding MGP_CBAJ_T0049466.1 MGP_CBAJ_G0024201.1 mouse_genomes_project 18 66750036 66754899 + Napg protein_coding retained_intron MGP_CBAJ_T0049467.1 MGP_CBAJ_G0024201.1 mouse_genomes_project 18 66752352 66755127 + Napg protein_coding retained_intron MGP_CBAJ_T0049468.1 MGP_CBAJ_G0024201.1 mouse_genomes_project 18 66758067 66764723 + Napg protein_coding processed_transcript MGP_CBAJ_T0049469.1 MGP_CBAJ_G0024201.1 mouse_genomes_project 18 66758150 66770803 + Napg protein_coding retained_intron MGP_CBAJ_T0049470.1 MGP_CBAJ_G0024201.1 mouse_genomes_project 18 66760323 66771259 + Napg protein_coding processed_transcript MGP_CBAJ_T0049775.1 MGP_CBAJ_G0024286.1 mouse_genomes_project 18 83795687 83809446 - MGP_CBAJ_P0049775 Siglec15 protein_coding protein_coding MGP_CBAJ_T0048797.1 MGP_CBAJ_G0023930.1 mouse_genomes_project 18 32754568 32786367 - MGP_CBAJ_P0048797 Gypc protein_coding protein_coding MGP_CBAJ_T0048798.1 MGP_CBAJ_G0023930.1 mouse_genomes_project 18 32754571 32786313 - MGP_CBAJ_P0048798 Gypc protein_coding protein_coding MGP_CBAJ_T0048799.1 MGP_CBAJ_G0023930.1 mouse_genomes_project 18 32756038 32761922 - MGP_CBAJ_P0048799 Gypc protein_coding protein_coding MGP_CBAJ_T0049704.1 MGP_CBAJ_G0024263.1 mouse_genomes_project 18 80046995 80077101 + MGP_CBAJ_P0049704 Acaa2 protein_coding protein_coding MGP_CBAJ_T0049176.1 MGP_CBAJ_G0024082.1 mouse_genomes_project 18 43614914 43696360 + MGP_CBAJ_P0049176 Rbm27 protein_coding protein_coding MGP_CBAJ_T0049177.1 MGP_CBAJ_G0024082.1 mouse_genomes_project 18 43614914 43696360 + MGP_CBAJ_P0049177 Rbm27 protein_coding protein_coding MGP_CBAJ_T0048761.1 MGP_CBAJ_G0023910.1 mouse_genomes_project 18 24891775 25193340 - MGP_CBAJ_P0048761 Celf4 protein_coding unknown_likely_coding MGP_CBAJ_T0048762.1 MGP_CBAJ_G0023910.1 mouse_genomes_project 18 24891775 24956157 - MGP_CBAJ_P0048762 Celf4 protein_coding unknown_likely_coding MGP_CBAJ_T0048763.1 MGP_CBAJ_G0023910.1 mouse_genomes_project 18 24891788 25193792 - MGP_CBAJ_P0048763 Celf4 protein_coding protein_coding MGP_CBAJ_T0048764.1 MGP_CBAJ_G0023910.1 mouse_genomes_project 18 24891788 25193792 - MGP_CBAJ_P0048764 Celf4 protein_coding protein_coding MGP_CBAJ_T0049250.1 MGP_CBAJ_G0024119.1 mouse_genomes_project 18 48999669 49047164 - MGP_CBAJ_P0049250 Sema6a protein_coding protein_coding MGP_CBAJ_T0049251.1 MGP_CBAJ_G0024119.1 mouse_genomes_project 18 49009309 49138412 - MGP_CBAJ_P0049251 Sema6a protein_coding protein_coding MGP_CBAJ_T0049252.1 MGP_CBAJ_G0024119.1 mouse_genomes_project 18 49009310 49138450 - MGP_CBAJ_P0049252 Sema6a protein_coding protein_coding MGP_CBAJ_T0049253.1 MGP_CBAJ_G0024119.1 mouse_genomes_project 18 49011487 49138028 - MGP_CBAJ_P0049253 Sema6a protein_coding protein_coding MGP_CBAJ_T0049254.1 MGP_CBAJ_G0024119.1 mouse_genomes_project 18 49011489 49138030 - MGP_CBAJ_P0049254 Sema6a protein_coding protein_coding MGP_CBAJ_T0049255.1 MGP_CBAJ_G0024119.1 mouse_genomes_project 18 49012423 49100795 - MGP_CBAJ_P0049255 Sema6a protein_coding protein_coding MGP_CBAJ_T0049256.1 MGP_CBAJ_G0024119.1 mouse_genomes_project 18 49041610 49138450 - Sema6a protein_coding retained_intron MGP_CBAJ_T0049257.1 MGP_CBAJ_G0024119.1 mouse_genomes_project 18 49041625 49138452 - Sema6a protein_coding retained_intron MGP_CBAJ_T0049258.1 MGP_CBAJ_G0024119.1 mouse_genomes_project 18 49059360 49100773 - MGP_CBAJ_P0049258 Sema6a protein_coding protein_coding MGP_CBAJ_T0049259.1 MGP_CBAJ_G0024119.1 mouse_genomes_project 18 49071136 49137850 - Sema6a protein_coding retained_intron MGP_CBAJ_T0049212.1 MGP_CBAJ_G0024101.1 mouse_genomes_project 18 45711117 45721946 + MGP_CBAJ_P0049212 Npy6r protein_coding protein_coding MGP_CBAJ_T0048494.1 MGP_CBAJ_G0023823.1 mouse_genomes_project 18 1267808 1290850 - MGP_CBAJ_P0048494 Map3k8 protein_coding protein_coding MGP_CBAJ_T0048495.1 MGP_CBAJ_G0023823.1 mouse_genomes_project 18 1267821 1290854 - MGP_CBAJ_P0048495 Map3k8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048496.1 MGP_CBAJ_G0023823.1 mouse_genomes_project 18 1267822 1272777 - Map3k8 protein_coding processed_transcript MGP_CBAJ_T0048497.1 MGP_CBAJ_G0023823.1 mouse_genomes_project 18 1270326 1271530 - Map3k8 protein_coding retained_intron MGP_CBAJ_T0048498.1 MGP_CBAJ_G0023823.1 mouse_genomes_project 18 1283938 1290912 - Map3k8 protein_coding retained_intron MGP_CBAJ_T0048693.1 MGP_CBAJ_G0023885.1 mouse_genomes_project 18 19918456 19975879 + MGP_CBAJ_P0048693 Rnf125 protein_coding protein_coding MGP_CBAJ_T0048665.1 MGP_CBAJ_G0023869.1 mouse_genomes_project 18 12745506 12802276 + MGP_CBAJ_P0048665 Psma8 protein_coding protein_coding MGP_CBAJ_T0006927.1 MGP_CBAJ_G0005689.1 mouse_genomes_project 18 46331267 46334555 + Gm43425 lincRNA lincRNA MGP_CBAJ_T0049008.1 MGP_CBAJ_G0024006.1 mouse_genomes_project 18 37745368 37945878 + MGP_CBAJ_P0049008 Pcdha9 protein_coding protein_coding MGP_CBAJ_T0049450.1 MGP_CBAJ_G0024192.1 mouse_genomes_project 18 65853225 65855370 - MGP_CBAJ_P0049450 Adrb2 protein_coding protein_coding MGP_CBAJ_T0049799.1 MGP_CBAJ_G0024297.1 mouse_genomes_project 18 86252362 86272619 - MGP_CBAJ_P0049799 Hsbp1l1 protein_coding protein_coding MGP_CBAJ_T0100273.1 MGP_CBAJ_G0038528.1 mouse_genomes_project 18 7983909 7984027 - Gm24894 snoRNA snoRNA MGP_CBAJ_T0049674.1 MGP_CBAJ_G0024254.1 mouse_genomes_project 18 78917635 78967386 - MGP_CBAJ_P0049674 Me2 protein_coding protein_coding MGP_CBAJ_T0049055.1 MGP_CBAJ_G0024042.1 mouse_genomes_project 18 38503458 38667943 + MGP_CBAJ_P0049055 Pcdhga5 protein_coding protein_coding MGP_CBAJ_T0049411.1 MGP_CBAJ_G0024176.1 mouse_genomes_project 18 64512721 64531649 - MGP_CBAJ_P0049411 Slc6a7 protein_coding protein_coding MGP_CBAJ_T0049298.1 MGP_CBAJ_G0024134.1 mouse_genomes_project 18 55147139 55149129 + MGP_CBAJ_P0049298 Gykl1 protein_coding protein_coding MGP_CBAJ_T0010155.1 MGP_CBAJ_G0008293.1 mouse_genomes_project 18 95915008 95915089 + Mir6359 miRNA miRNA MGP_CBAJ_T0006899.1 MGP_CBAJ_G0005669.1 mouse_genomes_project 18 1758910 1801612 + lincRNA lincRNA MGP_CBAJ_T0098190.1 MGP_CBAJ_G0036463.1 mouse_genomes_project 18 80046189 80046268 - Scarna17 scaRNA scaRNA MGP_CBAJ_T0048928.1 MGP_CBAJ_G0023972.1 mouse_genomes_project 18 36355292 36400040 + MGP_CBAJ_P0048928 Ube2d2a protein_coding protein_coding MGP_CBAJ_T0048929.1 MGP_CBAJ_G0023972.1 mouse_genomes_project 18 36355335 36400031 + MGP_CBAJ_P0048929 Ube2d2a protein_coding protein_coding MGP_CBAJ_T0013158.1 MGP_CBAJ_G0011270.1 mouse_genomes_project 18 38084722 38085987 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0048785.1 MGP_CBAJ_G0023922.1 mouse_genomes_project 18 32088136 32117626 + MGP_CBAJ_P0048785 Lims2 protein_coding protein_coding MGP_CBAJ_T0048787.1 MGP_CBAJ_G0023922.1 mouse_genomes_project 18 32113109 32116997 + MGP_CBAJ_P0048787 Lims2 protein_coding unknown_likely_coding MGP_CBAJ_T0048963.1 MGP_CBAJ_G0023982.1 mouse_genomes_project 18 37377518 37379376 + MGP_CBAJ_P0048963 Eif4ebp3 protein_coding protein_coding MGP_CBAJ_T0011336.1 MGP_CBAJ_G0009474.1 mouse_genomes_project 18 63166351 63166645 - Gm26028 misc_RNA misc_RNA MGP_CBAJ_T0100303.1 MGP_CBAJ_G0038558.1 mouse_genomes_project 18 88182669 88182797 + Gm26012 snoRNA snoRNA MGP_CBAJ_T0010151.1 MGP_CBAJ_G0008289.1 mouse_genomes_project 18 81655401 81655502 + Mir6358 miRNA miRNA MGP_CBAJ_T0010113.1 MGP_CBAJ_G0008251.1 mouse_genomes_project 18 7788293 7788459 - Gm44409 miRNA miRNA MGP_CBAJ_T0048901.1 MGP_CBAJ_G0023963.1 mouse_genomes_project 18 36146588 36167902 + MGP_CBAJ_P0048901 Paip2 protein_coding protein_coding MGP_CBAJ_T0048902.1 MGP_CBAJ_G0023963.1 mouse_genomes_project 18 36146595 36167066 + MGP_CBAJ_P0048902 Paip2 protein_coding protein_coding MGP_CBAJ_T0048903.1 MGP_CBAJ_G0023963.1 mouse_genomes_project 18 36146612 36167235 + MGP_CBAJ_P0048903 Paip2 protein_coding protein_coding MGP_CBAJ_T0048904.1 MGP_CBAJ_G0023963.1 mouse_genomes_project 18 36146620 36167899 + MGP_CBAJ_P0048904 Paip2 protein_coding protein_coding MGP_CBAJ_T0048905.1 MGP_CBAJ_G0023963.1 mouse_genomes_project 18 36147208 36167111 + MGP_CBAJ_P0048905 Paip2 protein_coding protein_coding MGP_CBAJ_T0048906.1 MGP_CBAJ_G0023963.1 mouse_genomes_project 18 36158242 36161384 + Paip2 protein_coding retained_intron MGP_CBAJ_T0048907.1 MGP_CBAJ_G0023963.1 mouse_genomes_project 18 36158943 36161833 + Paip2 protein_coding retained_intron MGP_CBAJ_T0048579.1 MGP_CBAJ_G0023839.1 mouse_genomes_project 18 6538931 6543185 - MGP_CBAJ_P0048579 Gjd4 protein_coding protein_coding MGP_CBAJ_T0011326.1 MGP_CBAJ_G0009464.1 mouse_genomes_project 18 32478263 32478571 + Gm22325 misc_RNA misc_RNA MGP_CBAJ_T0011324.1 MGP_CBAJ_G0009462.1 mouse_genomes_project 18 24085887 24086164 + Gm24294 misc_RNA misc_RNA MGP_CBAJ_T0010153.1 MGP_CBAJ_G0008291.1 mouse_genomes_project 18 88193153 88193224 - Mir5127 miRNA miRNA MGP_CBAJ_T0048635.1 MGP_CBAJ_G0023860.1 mouse_genomes_project 18 10121372 10404352 + MGP_CBAJ_P0048635 Lama3 protein_coding protein_coding MGP_CBAJ_T0048636.1 MGP_CBAJ_G0023860.1 mouse_genomes_project 18 10121577 10405394 + MGP_CBAJ_P0048636 Lama3 protein_coding unknown_likely_coding MGP_CBAJ_T0048637.1 MGP_CBAJ_G0023860.1 mouse_genomes_project 18 10319093 10404352 + MGP_CBAJ_P0048637 Lama3 protein_coding protein_coding MGP_CBAJ_T0013133.1 MGP_CBAJ_G0011245.1 mouse_genomes_project 18 2620587 2620960 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0049673.1 MGP_CBAJ_G0024253.1 mouse_genomes_project 18 78875443 78898447 - MGP_CBAJ_P0049673 Elac1 protein_coding protein_coding MGP_CBAJ_T0048689.1 MGP_CBAJ_G0023883.1 mouse_genomes_project 18 19623087 19689601 - MGP_CBAJ_P0048689 B4galt6 protein_coding protein_coding MGP_CBAJ_T0048861.1 MGP_CBAJ_G0023950.1 mouse_genomes_project 18 35166003 35184273 - MGP_CBAJ_P0048861 Cdc25c protein_coding protein_coding MGP_CBAJ_T0049169.1 MGP_CBAJ_G0024078.1 mouse_genomes_project 18 43364737 43481518 + MGP_CBAJ_P0049169 Sh3rf2 protein_coding protein_coding MGP_CBAJ_T0049170.1 MGP_CBAJ_G0024078.1 mouse_genomes_project 18 43364780 43481009 + MGP_CBAJ_P0049170 Sh3rf2 protein_coding protein_coding MGP_CBAJ_T0049171.1 MGP_CBAJ_G0024078.1 mouse_genomes_project 18 43464239 43478683 + Sh3rf2 protein_coding processed_transcript MGP_CBAJ_T0049172.1 MGP_CBAJ_G0024078.1 mouse_genomes_project 18 43464327 43475697 + Sh3rf2 protein_coding processed_transcript MGP_CBAJ_T0011342.1 MGP_CBAJ_G0009480.1 mouse_genomes_project 18 91315795 91316098 + Gm22819 misc_RNA misc_RNA MGP_CBAJ_T0049119.1 MGP_CBAJ_G0024063.1 mouse_genomes_project 18 39117280 39129547 + MGP_CBAJ_P0049119 0610009O20Rik protein_coding protein_coding MGP_CBAJ_T0049295.1 MGP_CBAJ_G0024132.1 mouse_genomes_project 18 55060625 55084369 + MGP_CBAJ_P0049295 Zfp474 protein_coding protein_coding MGP_CBAJ_T0049707.1 MGP_CBAJ_G0024266.1 mouse_genomes_project 18 80322259 80328155 + MGP_CBAJ_P0049707 BC031181 protein_coding protein_coding MGP_CBAJ_T0099037.1 MGP_CBAJ_G0037292.1 mouse_genomes_project 18 53543363 53543470 - Gm25739 snRNA snRNA MGP_CBAJ_T0048780.1 MGP_CBAJ_G0023919.1 mouse_genomes_project 18 31949141 32063694 + MGP_CBAJ_P0048780 Wdr33 protein_coding protein_coding MGP_CBAJ_T0048781.1 MGP_CBAJ_G0023919.1 mouse_genomes_project 18 31949141 31991611 + MGP_CBAJ_P0048781 Wdr33 protein_coding protein_coding MGP_CBAJ_T0048783.1 MGP_CBAJ_G0023919.1 mouse_genomes_project 18 32017906 32061649 + MGP_CBAJ_P0048783 Wdr33 protein_coding unknown_likely_coding MGP_CBAJ_T0049578.1 MGP_CBAJ_G0024239.1 mouse_genomes_project 18 72905170 72907279 + MGP_CBAJ_P0049578 Mc5r protein_coding protein_coding MGP_CBAJ_T0048675.1 MGP_CBAJ_G0023875.1 mouse_genomes_project 18 18750318 18792190 - MGP_CBAJ_P0048675 Dsc3 protein_coding protein_coding MGP_CBAJ_T0048676.1 MGP_CBAJ_G0023875.1 mouse_genomes_project 18 18753053 18792018 - MGP_CBAJ_P0048676 Dsc3 protein_coding unknown_likely_coding MGP_CBAJ_T0048641.1 MGP_CBAJ_G0023862.1 mouse_genomes_project 18 10583571 10599946 + MGP_CBAJ_P0048641 Cabyr protein_coding protein_coding MGP_CBAJ_T0048642.1 MGP_CBAJ_G0023862.1 mouse_genomes_project 18 10583594 10599940 + MGP_CBAJ_P0048642 Cabyr protein_coding nonsense_mediated_decay MGP_CBAJ_T0048643.1 MGP_CBAJ_G0023862.1 mouse_genomes_project 18 10583596 10599940 + MGP_CBAJ_P0048643 Cabyr protein_coding protein_coding MGP_CBAJ_T0048644.1 MGP_CBAJ_G0023862.1 mouse_genomes_project 18 10583602 10599942 + MGP_CBAJ_P0048644 Cabyr protein_coding protein_coding MGP_CBAJ_T0048645.1 MGP_CBAJ_G0023862.1 mouse_genomes_project 18 10583602 10599942 + MGP_CBAJ_P0048645 Cabyr protein_coding protein_coding MGP_CBAJ_T0048646.1 MGP_CBAJ_G0023862.1 mouse_genomes_project 18 10583602 10599942 + MGP_CBAJ_P0048646 Cabyr protein_coding protein_coding MGP_CBAJ_T0049530.1 MGP_CBAJ_G0024217.1 mouse_genomes_project 18 70121264 70125716 - MGP_CBAJ_P0049530 Rax protein_coding protein_coding MGP_CBAJ_T0003736.1 MGP_CBAJ_G0003356.1 mouse_genomes_project 18 38215480 38219616 - Gm37446 antisense antisense MGP_CBAJ_T0048786.1 MGP_CBAJ_G0023923.1 mouse_genomes_project 18 32102011 32108651 - MGP_CBAJ_P0048786 Gpr17 protein_coding protein_coding MGP_CBAJ_T0049759.1 MGP_CBAJ_G0024280.1 mouse_genomes_project 18 83117180 83252497 - MGP_CBAJ_P0049759 Rnf165 protein_coding protein_coding MGP_CBAJ_T0049760.1 MGP_CBAJ_G0024280.1 mouse_genomes_project 18 83127083 83165220 - MGP_CBAJ_P0049760 Rnf165 protein_coding protein_coding MGP_CBAJ_T0049761.1 MGP_CBAJ_G0024280.1 mouse_genomes_project 18 83127646 83137595 - Rnf165 protein_coding retained_intron MGP_CBAJ_T0049762.1 MGP_CBAJ_G0024280.1 mouse_genomes_project 18 83137183 83252411 - MGP_CBAJ_P0049762 Rnf165 protein_coding protein_coding MGP_CBAJ_T0049763.1 MGP_CBAJ_G0024280.1 mouse_genomes_project 18 83138775 83187331 - Rnf165 protein_coding processed_transcript MGP_CBAJ_T0049764.1 MGP_CBAJ_G0024280.1 mouse_genomes_project 18 83249459 83251974 - Rnf165 protein_coding retained_intron MGP_CBAJ_T0049765.1 MGP_CBAJ_G0024280.1 mouse_genomes_project 18 83250496 83252466 - MGP_CBAJ_P0049765 Rnf165 protein_coding protein_coding MGP_CBAJ_T0100305.1 MGP_CBAJ_G0038560.1 mouse_genomes_project 18 97623812 97623941 + Gm25418 snoRNA snoRNA MGP_CBAJ_T0049135.1 MGP_CBAJ_G0024070.1 mouse_genomes_project 18 39802132 39896739 - MGP_CBAJ_P0049135 Fgf1 protein_coding protein_coding MGP_CBAJ_T0049136.1 MGP_CBAJ_G0024070.1 mouse_genomes_project 18 39802134 39907320 - MGP_CBAJ_P0049136 Fgf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049137.1 MGP_CBAJ_G0024070.1 mouse_genomes_project 18 39803636 39839522 - MGP_CBAJ_P0049137 Fgf1 protein_coding protein_coding MGP_CBAJ_T0049138.1 MGP_CBAJ_G0024070.1 mouse_genomes_project 18 39805364 39831523 - MGP_CBAJ_P0049138 Fgf1 protein_coding protein_coding MGP_CBAJ_T0049139.1 MGP_CBAJ_G0024070.1 mouse_genomes_project 18 39813867 39838907 - MGP_CBAJ_P0049139 Fgf1 protein_coding protein_coding MGP_CBAJ_T0049140.1 MGP_CBAJ_G0024070.1 mouse_genomes_project 18 39813908 39831636 - Fgf1 protein_coding retained_intron MGP_CBAJ_T0049141.1 MGP_CBAJ_G0024070.1 mouse_genomes_project 18 39831342 39907071 - MGP_CBAJ_P0049141 Fgf1 protein_coding protein_coding MGP_CBAJ_T0099032.1 MGP_CBAJ_G0037287.1 mouse_genomes_project 18 39168347 39168450 + Gm23205 snRNA snRNA MGP_CBAJ_T0017354.1 MGP_CBAJ_G0015100.1 mouse_genomes_project 18 36095073 36100019 + Snhg4 processed_transcript lincRNA MGP_CBAJ_T0017355.1 MGP_CBAJ_G0015100.1 mouse_genomes_project 18 36095112 36096467 + Snhg4 processed_transcript retained_intron MGP_CBAJ_T0017356.1 MGP_CBAJ_G0015100.1 mouse_genomes_project 18 36095114 36098933 + Snhg4 processed_transcript retained_intron MGP_CBAJ_T0017357.1 MGP_CBAJ_G0015100.1 mouse_genomes_project 18 36095124 36097667 + Snhg4 processed_transcript retained_intron MGP_CBAJ_T0017358.1 MGP_CBAJ_G0015100.1 mouse_genomes_project 18 36097841 36099099 + Snhg4 processed_transcript retained_intron MGP_CBAJ_T0049811.1 MGP_CBAJ_G0024299.1 mouse_genomes_project 18 86337917 86415574 - MGP_CBAJ_P0049811 Kcng2 protein_coding protein_coding MGP_CBAJ_T0049812.1 MGP_CBAJ_G0024299.1 mouse_genomes_project 18 86368709 86414656 - MGP_CBAJ_P0049812 Kcng2 protein_coding protein_coding MGP_CBAJ_T0049813.1 MGP_CBAJ_G0024299.1 mouse_genomes_project 18 86368974 86414970 - MGP_CBAJ_P0049813 Kcng2 protein_coding protein_coding MGP_CBAJ_T0006923.1 MGP_CBAJ_G0005687.1 mouse_genomes_project 18 38445605 38451928 + 3222401L13Rik lincRNA lincRNA MGP_CBAJ_T0006924.1 MGP_CBAJ_G0005687.1 mouse_genomes_project 18 38446062 38448921 + 3222401L13Rik lincRNA lincRNA MGP_CBAJ_T0049067.1 MGP_CBAJ_G0024050.1 mouse_genomes_project 18 38562104 38667943 + MGP_CBAJ_P0049067 Pcdhga10 protein_coding protein_coding MGP_CBAJ_T0048831.1 MGP_CBAJ_G0023942.1 mouse_genomes_project 18 34833467 34911116 - MGP_CBAJ_P0048831 Fam13b protein_coding protein_coding MGP_CBAJ_T0099021.1 MGP_CBAJ_G0037276.1 mouse_genomes_project 18 662396 662460 - Gm23643 snRNA snRNA MGP_CBAJ_T0048658.1 MGP_CBAJ_G0023864.1 mouse_genomes_project 18 10847711 10873527 + MGP_CBAJ_P0048658 Impact protein_coding protein_coding MGP_CBAJ_T0100281.1 MGP_CBAJ_G0038536.1 mouse_genomes_project 18 31581405 31581538 - Gm25396 snoRNA snoRNA MGP_CBAJ_T0017387.1 MGP_CBAJ_G0015109.1 mouse_genomes_project 18 70547856 70585449 + Gm15958 processed_transcript processed_transcript MGP_CBAJ_T0017388.1 MGP_CBAJ_G0015109.1 mouse_genomes_project 18 70548469 70578165 + Gm15958 processed_transcript processed_transcript MGP_CBAJ_T0049776.1 MGP_CBAJ_G0024287.1 mouse_genomes_project 18 83863041 83886313 - MGP_CBAJ_P0049776 Slc14a1 protein_coding protein_coding MGP_CBAJ_T0049777.1 MGP_CBAJ_G0024287.1 mouse_genomes_project 18 83864599 83912546 - MGP_CBAJ_P0049777 Slc14a1 protein_coding protein_coding MGP_CBAJ_T0049778.1 MGP_CBAJ_G0024287.1 mouse_genomes_project 18 83864599 83886218 - MGP_CBAJ_P0049778 Slc14a1 protein_coding protein_coding MGP_CBAJ_T0048976.1 MGP_CBAJ_G0023988.1 mouse_genomes_project 18 37469650 37471847 - MGP_CBAJ_P0048976 Ndufa2 protein_coding protein_coding MGP_CBAJ_T0003723.1 MGP_CBAJ_G0003346.1 mouse_genomes_project 18 15035252 15036198 + Gm15485 antisense antisense MGP_CBAJ_T0049235.1 MGP_CBAJ_G0024108.1 mouse_genomes_project 18 47858930 47903119 - MGP_CBAJ_P0049235 Pggt1b protein_coding protein_coding MGP_CBAJ_T0010125.1 MGP_CBAJ_G0008263.1 mouse_genomes_project 18 38680645 38680701 - Mir6979 miRNA miRNA MGP_CBAJ_T0011320.1 MGP_CBAJ_G0009458.1 mouse_genomes_project 18 14475231 14475581 - Gm24385 misc_RNA misc_RNA MGP_CBAJ_T0100274.1 MGP_CBAJ_G0038529.1 mouse_genomes_project 18 8215479 8215601 + Gm25116 snoRNA snoRNA MGP_CBAJ_T0048865.1 MGP_CBAJ_G0023953.1 mouse_genomes_project 18 35277615 35286860 + MGP_CBAJ_P0048865 Reep2 protein_coding protein_coding MGP_CBAJ_T0048804.1 MGP_CBAJ_G0023934.1 mouse_genomes_project 18 33464120 33478862 - MGP_CBAJ_P0048804 Stard4 protein_coding protein_coding MGP_CBAJ_T0048805.1 MGP_CBAJ_G0023934.1 mouse_genomes_project 18 33468166 33478766 - MGP_CBAJ_P0048805 Stard4 protein_coding protein_coding MGP_CBAJ_T0048806.1 MGP_CBAJ_G0023934.1 mouse_genomes_project 18 33468360 33478772 - MGP_CBAJ_P0048806 Stard4 protein_coding protein_coding MGP_CBAJ_T0048807.1 MGP_CBAJ_G0023934.1 mouse_genomes_project 18 33469658 33478821 - Stard4 protein_coding retained_intron MGP_CBAJ_T0049031.1 MGP_CBAJ_G0024022.1 mouse_genomes_project 18 38200087 38207895 + MGP_CBAJ_P0049031 Pcdhb11 protein_coding protein_coding MGP_CBAJ_T0006917.1 MGP_CBAJ_G0005683.1 mouse_genomes_project 18 34074640 34075735 + Epb41l4aos lincRNA lincRNA MGP_CBAJ_T0006918.1 MGP_CBAJ_G0005683.1 mouse_genomes_project 18 34074687 34075718 + Epb41l4aos lincRNA lincRNA MGP_CBAJ_T0048974.1 MGP_CBAJ_G0023986.1 mouse_genomes_project 18 37447606 37449273 - MGP_CBAJ_P0048974 Cd14 protein_coding protein_coding MGP_CBAJ_T0013170.1 MGP_CBAJ_G0011282.1 mouse_genomes_project 18 50505014 50506020 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0048673.1 MGP_CBAJ_G0023874.1 mouse_genomes_project 18 14885464 15119023 - MGP_CBAJ_P0048673 Cdh2 protein_coding protein_coding MGP_CBAJ_T0048674.1 MGP_CBAJ_G0023874.1 mouse_genomes_project 18 15080004 15119091 - Cdh2 protein_coding retained_intron MGP_CBAJ_T0049317.1 MGP_CBAJ_G0024144.1 mouse_genomes_project 18 59450020 59471324 - Aldh7a1 protein_coding processed_transcript MGP_CBAJ_T0049318.1 MGP_CBAJ_G0024144.1 mouse_genomes_project 18 59466347 59519127 - MGP_CBAJ_P0049318 Aldh7a1 protein_coding protein_coding MGP_CBAJ_T0049319.1 MGP_CBAJ_G0024144.1 mouse_genomes_project 18 59471079 59508783 - MGP_CBAJ_P0049319 Aldh7a1 protein_coding protein_coding MGP_CBAJ_T0049320.1 MGP_CBAJ_G0024144.1 mouse_genomes_project 18 59471218 59508764 - MGP_CBAJ_P0049320 Aldh7a1 protein_coding protein_coding MGP_CBAJ_T0049321.1 MGP_CBAJ_G0024144.1 mouse_genomes_project 18 59471224 59508673 - MGP_CBAJ_P0049321 Aldh7a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049322.1 MGP_CBAJ_G0024144.1 mouse_genomes_project 18 59476980 59482043 - Aldh7a1 protein_coding retained_intron MGP_CBAJ_T0049323.1 MGP_CBAJ_G0024144.1 mouse_genomes_project 18 59481673 59508681 - MGP_CBAJ_P0049323 Aldh7a1 protein_coding protein_coding MGP_CBAJ_T0049324.1 MGP_CBAJ_G0024144.1 mouse_genomes_project 18 59491236 59505880 - Aldh7a1 protein_coding retained_intron MGP_CBAJ_T0049325.1 MGP_CBAJ_G0024144.1 mouse_genomes_project 18 59496841 59508652 - MGP_CBAJ_P0049325 Aldh7a1 protein_coding protein_coding MGP_CBAJ_T0013183.1 MGP_CBAJ_G0011295.1 mouse_genomes_project 18 85841352 85842348 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0013144.1 MGP_CBAJ_G0011256.1 mouse_genomes_project 18 10584711 10585493 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0049022.1 MGP_CBAJ_G0024015.1 mouse_genomes_project 18 38086653 38090369 + MGP_CBAJ_P0049022 Pcdhb4 protein_coding protein_coding MGP_CBAJ_T0048447.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 84874 146265 - MGP_CBAJ_P0048447 Crem protein_coding protein_coding MGP_CBAJ_T0048448.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 85180 160419 - MGP_CBAJ_P0048448 Crem protein_coding protein_coding MGP_CBAJ_T0048449.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 85182 118348 - MGP_CBAJ_P0048449 Crem protein_coding protein_coding MGP_CBAJ_T0048450.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 85182 160329 - MGP_CBAJ_P0048450 Crem protein_coding protein_coding MGP_CBAJ_T0048451.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 85182 160329 - MGP_CBAJ_P0048451 Crem protein_coding protein_coding MGP_CBAJ_T0048452.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 85182 160329 - MGP_CBAJ_P0048452 Crem protein_coding protein_coding MGP_CBAJ_T0048453.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 85182 160228 - MGP_CBAJ_P0048453 Crem protein_coding protein_coding MGP_CBAJ_T0048454.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 85783 100559 - MGP_CBAJ_P0048454 Crem protein_coding protein_coding MGP_CBAJ_T0048455.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 85789 160253 - Crem protein_coding processed_transcript MGP_CBAJ_T0048456.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86087 160488 - MGP_CBAJ_P0048456 Crem protein_coding protein_coding MGP_CBAJ_T0048457.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86090 118345 - MGP_CBAJ_P0048457 Crem protein_coding protein_coding MGP_CBAJ_T0048458.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86216 100537 - MGP_CBAJ_P0048458 Crem protein_coding protein_coding MGP_CBAJ_T0048459.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86249 146181 - MGP_CBAJ_P0048459 Crem protein_coding protein_coding MGP_CBAJ_T0048460.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86340 144148 - MGP_CBAJ_P0048460 Crem protein_coding protein_coding MGP_CBAJ_T0048461.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86360 99921 - MGP_CBAJ_P0048461 Crem protein_coding protein_coding MGP_CBAJ_T0048462.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86372 99867 - MGP_CBAJ_P0048462 Crem protein_coding protein_coding MGP_CBAJ_T0048463.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86384 144152 - MGP_CBAJ_P0048463 Crem protein_coding protein_coding MGP_CBAJ_T0048464.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86398 100559 - MGP_CBAJ_P0048464 Crem protein_coding protein_coding MGP_CBAJ_T0048465.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86401 144148 - MGP_CBAJ_P0048465 Crem protein_coding protein_coding MGP_CBAJ_T0048466.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86411 146181 - MGP_CBAJ_P0048466 Crem protein_coding protein_coding MGP_CBAJ_T0048467.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86411 146181 - MGP_CBAJ_P0048467 Crem protein_coding protein_coding MGP_CBAJ_T0048468.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86411 146181 - MGP_CBAJ_P0048468 Crem protein_coding protein_coding MGP_CBAJ_T0048469.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86411 160273 - MGP_CBAJ_P0048469 Crem protein_coding nonsense_mediated_decay MGP_CBAJ_T0048470.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86411 146181 - MGP_CBAJ_P0048470 Crem protein_coding protein_coding MGP_CBAJ_T0048471.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86414 144148 - MGP_CBAJ_P0048471 Crem protein_coding protein_coding MGP_CBAJ_T0048472.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86414 128488 - MGP_CBAJ_P0048472 Crem protein_coding protein_coding MGP_CBAJ_T0048473.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86414 128623 - MGP_CBAJ_P0048473 Crem protein_coding protein_coding MGP_CBAJ_T0048474.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86414 128488 - MGP_CBAJ_P0048474 Crem protein_coding protein_coding MGP_CBAJ_T0048475.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86459 99890 - MGP_CBAJ_P0048475 Crem protein_coding protein_coding MGP_CBAJ_T0048476.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86665 144148 - MGP_CBAJ_P0048476 Crem protein_coding nonsense_mediated_decay MGP_CBAJ_T0048477.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86671 100528 - MGP_CBAJ_P0048477 Crem protein_coding protein_coding MGP_CBAJ_T0048478.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86811 128665 - MGP_CBAJ_P0048478 Crem protein_coding protein_coding MGP_CBAJ_T0048479.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 86811 118241 - MGP_CBAJ_P0048479 Crem protein_coding protein_coding MGP_CBAJ_T0048480.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 102687 118330 - Crem protein_coding processed_transcript MGP_CBAJ_T0048481.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 106421 118345 - Crem protein_coding retained_intron MGP_CBAJ_T0048482.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 106844 118343 - Crem protein_coding processed_transcript MGP_CBAJ_T0048483.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 112969 160329 - MGP_CBAJ_P0048483 Crem protein_coding protein_coding MGP_CBAJ_T0048484.1 MGP_CBAJ_G0023819.1 mouse_genomes_project 18 113271 160314 - MGP_CBAJ_P0048484 Crem protein_coding protein_coding MGP_CBAJ_T0049439.1 MGP_CBAJ_G0024186.1 mouse_genomes_project 18 65310750 65318619 + MGP_CBAJ_P0049439 Il17b protein_coding protein_coding MGP_CBAJ_T0017372.1 MGP_CBAJ_G0015105.1 mouse_genomes_project 18 51839575 51840968 + Gm16283 processed_transcript processed_transcript MGP_CBAJ_T0048908.1 MGP_CBAJ_G0023964.1 mouse_genomes_project 18 36162562 36179682 - MGP_CBAJ_P0048908 Slc23a1 protein_coding protein_coding MGP_CBAJ_T0048909.1 MGP_CBAJ_G0023964.1 mouse_genomes_project 18 36170089 36179634 - MGP_CBAJ_P0048909 Slc23a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048910.1 MGP_CBAJ_G0023964.1 mouse_genomes_project 18 36170785 36173322 - Slc23a1 protein_coding processed_transcript MGP_CBAJ_T0048911.1 MGP_CBAJ_G0023964.1 mouse_genomes_project 18 36173539 36179674 - Slc23a1 protein_coding processed_transcript MGP_CBAJ_T0048725.1 MGP_CBAJ_G0023895.1 mouse_genomes_project 18 23199022 23209006 + MGP_CBAJ_P0048725 Zfp397 protein_coding protein_coding MGP_CBAJ_T0003742.1 MGP_CBAJ_G0003362.1 mouse_genomes_project 18 40264746 40321197 - Gm15336 antisense antisense MGP_CBAJ_T0006950.1 MGP_CBAJ_G0005708.1 mouse_genomes_project 18 89194811 89210191 + 4930445N18Rik lincRNA lincRNA MGP_CBAJ_T0006951.1 MGP_CBAJ_G0005708.1 mouse_genomes_project 18 89194814 89198080 + 4930445N18Rik lincRNA lincRNA MGP_CBAJ_T0049091.1 MGP_CBAJ_G0024058.1 mouse_genomes_project 18 38771306 38781021 - Hdac3 protein_coding retained_intron MGP_CBAJ_T0049092.1 MGP_CBAJ_G0024058.1 mouse_genomes_project 18 38772434 38779536 - Hdac3 protein_coding retained_intron MGP_CBAJ_T0049093.1 MGP_CBAJ_G0024058.1 mouse_genomes_project 18 38772434 38790423 - MGP_CBAJ_P0049093 Hdac3 protein_coding protein_coding MGP_CBAJ_T0049094.1 MGP_CBAJ_G0024058.1 mouse_genomes_project 18 38772440 38790366 - Hdac3 protein_coding processed_transcript MGP_CBAJ_T0010126.1 MGP_CBAJ_G0008264.1 mouse_genomes_project 18 38809938 38810053 - Mir6981 miRNA miRNA MGP_CBAJ_T0048876.1 MGP_CBAJ_G0023959.1 mouse_genomes_project 18 35770590 35969991 - MGP_CBAJ_P0048876 Sil1 protein_coding protein_coding MGP_CBAJ_T0049367.1 MGP_CBAJ_G0024166.1 mouse_genomes_project 18 64012002 64039377 + MGP_CBAJ_P0049367 Dctn4 protein_coding protein_coding MGP_CBAJ_T0049368.1 MGP_CBAJ_G0024166.1 mouse_genomes_project 18 64012012 64039380 + MGP_CBAJ_P0049368 Dctn4 protein_coding unknown_likely_coding MGP_CBAJ_T0000972.1 MGP_CBAJ_G0000904.1 mouse_genomes_project 18 57875478 57875690 + TEC TEC MGP_CBAJ_T0049341.1 MGP_CBAJ_G0024150.1 mouse_genomes_project 18 60177857 60373336 + MGP_CBAJ_P0049341 Megf10 protein_coding protein_coding MGP_CBAJ_T0049342.1 MGP_CBAJ_G0024150.1 mouse_genomes_project 18 60190985 60368591 + MGP_CBAJ_P0049342 Megf10 protein_coding protein_coding MGP_CBAJ_T0003718.1 MGP_CBAJ_G0003342.1 mouse_genomes_project 18 3523789 3530420 + Gm28529 antisense antisense MGP_CBAJ_T0003719.1 MGP_CBAJ_G0003342.1 mouse_genomes_project 18 3523801 3524771 + Gm28529 antisense antisense MGP_CBAJ_T0013176.1 MGP_CBAJ_G0011288.1 mouse_genomes_project 18 58653204 58654182 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100299.1 MGP_CBAJ_G0038554.1 mouse_genomes_project 18 80317812 80317877 + Gm23301 snoRNA snoRNA MGP_CBAJ_T0049413.1 MGP_CBAJ_G0024178.1 mouse_genomes_project 18 64562841 64602912 + MGP_CBAJ_P0049413 Pdgfrb protein_coding protein_coding MGP_CBAJ_T0049414.1 MGP_CBAJ_G0024178.1 mouse_genomes_project 18 64562891 64602907 + MGP_CBAJ_P0049414 Pdgfrb protein_coding protein_coding MGP_CBAJ_T0049415.1 MGP_CBAJ_G0024178.1 mouse_genomes_project 18 64563190 64602915 + MGP_CBAJ_P0049415 Pdgfrb protein_coding unknown_likely_coding MGP_CBAJ_T0017366.1 MGP_CBAJ_G0015103.1 mouse_genomes_project 18 38647348 38666268 + Gm38182 processed_transcript processed_transcript MGP_CBAJ_T0017367.1 MGP_CBAJ_G0015103.1 mouse_genomes_project 18 38647617 38666126 + Gm38182 processed_transcript processed_transcript MGP_CBAJ_T0017368.1 MGP_CBAJ_G0015103.1 mouse_genomes_project 18 38647828 38666447 + Gm38182 processed_transcript processed_transcript MGP_CBAJ_T0017369.1 MGP_CBAJ_G0015103.1 mouse_genomes_project 18 38647913 38666450 + Gm38182 processed_transcript processed_transcript MGP_CBAJ_T0017370.1 MGP_CBAJ_G0015103.1 mouse_genomes_project 18 38648242 38666448 + Gm38182 processed_transcript processed_transcript MGP_CBAJ_T0049049.1 MGP_CBAJ_G0024038.1 mouse_genomes_project 18 38465872 38667943 + MGP_CBAJ_P0049049 Pcdhga3 protein_coding protein_coding MGP_CBAJ_T0017394.1 MGP_CBAJ_G0015111.1 mouse_genomes_project 18 80757026 80758788 - Gm20544 processed_transcript processed_transcript MGP_CBAJ_T0049675.1 MGP_CBAJ_G0024255.1 mouse_genomes_project 18 79017374 79039004 + MGP_CBAJ_P0049675 Mro protein_coding protein_coding MGP_CBAJ_T0049676.1 MGP_CBAJ_G0024255.1 mouse_genomes_project 18 79017376 79039388 + MGP_CBAJ_P0049676 Mro protein_coding protein_coding MGP_CBAJ_T0049677.1 MGP_CBAJ_G0024255.1 mouse_genomes_project 18 79017383 79041573 + Mro protein_coding processed_transcript MGP_CBAJ_T0049678.1 MGP_CBAJ_G0024255.1 mouse_genomes_project 18 79017391 79039004 + MGP_CBAJ_P0049678 Mro protein_coding protein_coding MGP_CBAJ_T0049679.1 MGP_CBAJ_G0024255.1 mouse_genomes_project 18 79021622 79028210 + Mro protein_coding retained_intron MGP_CBAJ_T0049680.1 MGP_CBAJ_G0024255.1 mouse_genomes_project 18 79021663 79029834 + MGP_CBAJ_P0049680 Mro protein_coding protein_coding MGP_CBAJ_T0048593.1 MGP_CBAJ_G0023847.1 mouse_genomes_project 18 7743297 7929141 + Greb1l protein_coding retained_intron MGP_CBAJ_T0048594.1 MGP_CBAJ_G0023847.1 mouse_genomes_project 18 7743299 7998316 + MGP_CBAJ_P0048594 Greb1l protein_coding protein_coding MGP_CBAJ_T0048595.1 MGP_CBAJ_G0023847.1 mouse_genomes_project 18 7880646 7995859 + MGP_CBAJ_P0048595 Greb1l protein_coding unknown_likely_coding MGP_CBAJ_T0048596.1 MGP_CBAJ_G0023847.1 mouse_genomes_project 18 7880646 7970257 + MGP_CBAJ_P0048596 Greb1l protein_coding protein_coding MGP_CBAJ_T0048597.1 MGP_CBAJ_G0023847.1 mouse_genomes_project 18 7937514 7945991 + Greb1l protein_coding retained_intron MGP_CBAJ_T0048598.1 MGP_CBAJ_G0023847.1 mouse_genomes_project 18 7938822 7986320 + MGP_CBAJ_P0048598 Greb1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0048599.1 MGP_CBAJ_G0023847.1 mouse_genomes_project 18 7986401 7994225 + Greb1l protein_coding processed_transcript MGP_CBAJ_T0003760.1 MGP_CBAJ_G0003372.1 mouse_genomes_project 18 74706080 74708770 + 4930448D08Rik antisense antisense MGP_CBAJ_T0049352.1 MGP_CBAJ_G0024157.1 mouse_genomes_project 18 61940064 61970182 + MGP_CBAJ_P0049352 Isoc1 protein_coding protein_coding MGP_CBAJ_T0049310.1 MGP_CBAJ_G0024139.1 mouse_genomes_project 18 56014395 56129489 + MGP_CBAJ_P0049310 Prdm6 protein_coding protein_coding MGP_CBAJ_T0049311.1 MGP_CBAJ_G0024139.1 mouse_genomes_project 18 56015555 56130277 + MGP_CBAJ_P0049311 Prdm6 protein_coding protein_coding MGP_CBAJ_T0049312.1 MGP_CBAJ_G0024139.1 mouse_genomes_project 18 56109378 56130277 + MGP_CBAJ_P0049312 Prdm6 protein_coding protein_coding MGP_CBAJ_T0017371.1 MGP_CBAJ_G0015104.1 mouse_genomes_project 18 39073366 39096413 + 2010320O07Rik processed_transcript processed_transcript MGP_CBAJ_T0049363.1 MGP_CBAJ_G0024162.1 mouse_genomes_project 18 63743092 63751389 - MGP_CBAJ_P0049363 Gm4841 protein_coding protein_coding MGP_CBAJ_T0049349.1 MGP_CBAJ_G0024154.1 mouse_genomes_project 18 61028107 61102644 + MGP_CBAJ_P0049349 Slc12a2 protein_coding protein_coding MGP_CBAJ_T0049264.1 MGP_CBAJ_G0024122.1 mouse_genomes_project 18 51923501 52085416 + MGP_CBAJ_P0049264 Dmxl1 protein_coding protein_coding MGP_CBAJ_T0049265.1 MGP_CBAJ_G0024122.1 mouse_genomes_project 18 51923828 52086635 + MGP_CBAJ_P0049265 Dmxl1 protein_coding protein_coding MGP_CBAJ_T0049266.1 MGP_CBAJ_G0024122.1 mouse_genomes_project 18 51923921 52081333 + MGP_CBAJ_P0049266 Dmxl1 protein_coding unknown_likely_coding MGP_CBAJ_T0049267.1 MGP_CBAJ_G0024122.1 mouse_genomes_project 18 52001464 52041889 + Dmxl1 protein_coding retained_intron MGP_CBAJ_T0049268.1 MGP_CBAJ_G0024122.1 mouse_genomes_project 18 52059851 52066304 + Dmxl1 protein_coding retained_intron MGP_CBAJ_T0049269.1 MGP_CBAJ_G0024122.1 mouse_genomes_project 18 52068738 52072417 + Dmxl1 protein_coding retained_intron MGP_CBAJ_T0049182.1 MGP_CBAJ_G0024086.1 mouse_genomes_project 18 44037026 44302477 - Ppp2r2b protein_coding processed_transcript MGP_CBAJ_T0049183.1 MGP_CBAJ_G0024086.1 mouse_genomes_project 18 44044438 44302268 - MGP_CBAJ_P0049183 Ppp2r2b protein_coding protein_coding MGP_CBAJ_T0049184.1 MGP_CBAJ_G0024086.1 mouse_genomes_project 18 44044438 44453105 - MGP_CBAJ_P0049184 Ppp2r2b protein_coding protein_coding MGP_CBAJ_T0049185.1 MGP_CBAJ_G0024086.1 mouse_genomes_project 18 44044463 44302617 - MGP_CBAJ_P0049185 Ppp2r2b protein_coding protein_coding MGP_CBAJ_T0049186.1 MGP_CBAJ_G0024086.1 mouse_genomes_project 18 44144629 44341103 - Ppp2r2b protein_coding processed_transcript MGP_CBAJ_T0049187.1 MGP_CBAJ_G0024086.1 mouse_genomes_project 18 44165180 44301789 - Ppp2r2b protein_coding processed_transcript MGP_CBAJ_T0010144.1 MGP_CBAJ_G0008282.1 mouse_genomes_project 18 69303858 69303924 + Mir122 miRNA miRNA MGP_CBAJ_T0048677.1 MGP_CBAJ_G0023876.1 mouse_genomes_project 18 18827716 18858767 - MGP_CBAJ_P0048677 Dsc2 protein_coding protein_coding MGP_CBAJ_T0048678.1 MGP_CBAJ_G0023876.1 mouse_genomes_project 18 18827716 18858843 - MGP_CBAJ_P0048678 Dsc2 protein_coding protein_coding MGP_CBAJ_T0048679.1 MGP_CBAJ_G0023876.1 mouse_genomes_project 18 18828426 18837422 - MGP_CBAJ_P0048679 Dsc2 protein_coding protein_coding MGP_CBAJ_T0048680.1 MGP_CBAJ_G0023876.1 mouse_genomes_project 18 18828562 18858798 - MGP_CBAJ_P0048680 Dsc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049238.1 MGP_CBAJ_G0024111.1 mouse_genomes_project 18 48235067 48250513 - MGP_CBAJ_P0049238 Ticam2 protein_coding protein_coding MGP_CBAJ_T0049240.1 MGP_CBAJ_G0024111.1 mouse_genomes_project 18 48247192 48250513 - Ticam2 protein_coding retained_intron MGP_CBAJ_T0049705.1 MGP_CBAJ_G0024264.1 mouse_genomes_project 18 80233706 80261485 - MGP_CBAJ_P0049705 Lipg protein_coding protein_coding MGP_CBAJ_T0049552.1 MGP_CBAJ_G0024229.1 mouse_genomes_project 18 71947573 71964380 + MGP_CBAJ_P0049552 Slmo1 protein_coding protein_coding MGP_CBAJ_T0049195.1 MGP_CBAJ_G0024089.1 mouse_genomes_project 18 44933478 45119125 - MGP_CBAJ_P0049195 Jakmip2 protein_coding protein_coding MGP_CBAJ_T0006928.1 MGP_CBAJ_G0005690.1 mouse_genomes_project 18 51562720 51563872 + 1700044K03Rik lincRNA lincRNA MGP_CBAJ_T0049001.1 MGP_CBAJ_G0024000.1 mouse_genomes_project 18 37702351 37945878 + MGP_CBAJ_P0049001 Pcdha5 protein_coding protein_coding MGP_CBAJ_T0013173.1 MGP_CBAJ_G0011285.1 mouse_genomes_project 18 55434357 55434916 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0048584.1 MGP_CBAJ_G0023844.1 mouse_genomes_project 18 7322836 7365893 + MGP_CBAJ_P0048584 Thoc1 protein_coding protein_coding MGP_CBAJ_T0049045.1 MGP_CBAJ_G0024035.1 mouse_genomes_project 18 38430647 38434362 - MGP_CBAJ_P0049045 Taf7 protein_coding protein_coding MGP_CBAJ_T0011330.1 MGP_CBAJ_G0009468.1 mouse_genomes_project 18 41977622 41977927 - Gm22515 misc_RNA misc_RNA MGP_CBAJ_T0049785.1 MGP_CBAJ_G0024293.1 mouse_genomes_project 18 86138381 86163552 - MGP_CBAJ_P0049785 Adnp2 protein_coding protein_coding MGP_CBAJ_T0011331.1 MGP_CBAJ_G0009469.1 mouse_genomes_project 18 42148007 42148281 + Gm22483 misc_RNA misc_RNA MGP_CBAJ_T0048696.1 MGP_CBAJ_G0023887.1 mouse_genomes_project 18 20093757 20129319 + MGP_CBAJ_P0048696 Mep1b protein_coding protein_coding MGP_CBAJ_T0000975.1 MGP_CBAJ_G0000907.1 mouse_genomes_project 18 65597309 65597547 - TEC TEC MGP_CBAJ_T0049027.1 MGP_CBAJ_G0024019.1 mouse_genomes_project 18 38135366 38139769 + MGP_CBAJ_P0049027 Pcdhb8 protein_coding protein_coding MGP_CBAJ_T0049028.1 MGP_CBAJ_G0024019.1 mouse_genomes_project 18 38135516 38141768 + MGP_CBAJ_P0049028 Pcdhb8 protein_coding protein_coding MGP_CBAJ_T0010119.1 MGP_CBAJ_G0008257.1 mouse_genomes_project 18 23748812 23748873 - Mir187 miRNA miRNA MGP_CBAJ_T0049527.1 MGP_CBAJ_G0024216.1 mouse_genomes_project 18 70042007 70056084 + MGP_CBAJ_P0049527 Grp protein_coding protein_coding MGP_CBAJ_T0049528.1 MGP_CBAJ_G0024216.1 mouse_genomes_project 18 70042680 70049432 + MGP_CBAJ_P0049528 Grp protein_coding protein_coding MGP_CBAJ_T0049529.1 MGP_CBAJ_G0024216.1 mouse_genomes_project 18 70042690 70056083 + MGP_CBAJ_P0049529 Grp protein_coding protein_coding MGP_CBAJ_T0049374.1 MGP_CBAJ_G0024168.1 mouse_genomes_project 18 64059907 64079004 - MGP_CBAJ_P0049374 Myoz3 protein_coding protein_coding MGP_CBAJ_T0048528.1 MGP_CBAJ_G0023829.1 mouse_genomes_project 18 3027230 3112962 - MGP_CBAJ_P0048528 Arhgap12 protein_coding protein_coding MGP_CBAJ_T0048529.1 MGP_CBAJ_G0023829.1 mouse_genomes_project 18 3027588 3138300 - MGP_CBAJ_P0048529 Arhgap12 protein_coding protein_coding MGP_CBAJ_T0048530.1 MGP_CBAJ_G0023829.1 mouse_genomes_project 18 3027998 3138353 - MGP_CBAJ_P0048530 Arhgap12 protein_coding protein_coding MGP_CBAJ_T0048531.1 MGP_CBAJ_G0023829.1 mouse_genomes_project 18 3028018 3138491 - MGP_CBAJ_P0048531 Arhgap12 protein_coding protein_coding MGP_CBAJ_T0048532.1 MGP_CBAJ_G0023829.1 mouse_genomes_project 18 3029233 3138285 - MGP_CBAJ_P0048532 Arhgap12 protein_coding protein_coding MGP_CBAJ_T0048533.1 MGP_CBAJ_G0023829.1 mouse_genomes_project 18 3029357 3138281 - MGP_CBAJ_P0048533 Arhgap12 protein_coding protein_coding MGP_CBAJ_T0048534.1 MGP_CBAJ_G0023829.1 mouse_genomes_project 18 3036225 3037721 - Arhgap12 protein_coding retained_intron MGP_CBAJ_T0048535.1 MGP_CBAJ_G0023829.1 mouse_genomes_project 18 3042438 3091612 - Arhgap12 protein_coding processed_transcript MGP_CBAJ_T0048536.1 MGP_CBAJ_G0023829.1 mouse_genomes_project 18 3049455 3112579 - MGP_CBAJ_P0048536 Arhgap12 protein_coding protein_coding MGP_CBAJ_T0048537.1 MGP_CBAJ_G0023829.1 mouse_genomes_project 18 3057707 3138363 - Arhgap12 protein_coding processed_transcript MGP_CBAJ_T0048538.1 MGP_CBAJ_G0023829.1 mouse_genomes_project 18 3061993 3070078 - Arhgap12 protein_coding processed_transcript MGP_CBAJ_T0048539.1 MGP_CBAJ_G0023829.1 mouse_genomes_project 18 3062097 3138348 - MGP_CBAJ_P0048539 Arhgap12 protein_coding protein_coding MGP_CBAJ_T0048540.1 MGP_CBAJ_G0023829.1 mouse_genomes_project 18 3064491 3138334 - Arhgap12 protein_coding processed_transcript MGP_CBAJ_T0048541.1 MGP_CBAJ_G0023829.1 mouse_genomes_project 18 3065861 3138328 - Arhgap12 protein_coding processed_transcript MGP_CBAJ_T0048542.1 MGP_CBAJ_G0023829.1 mouse_genomes_project 18 3068783 3071231 - Arhgap12 protein_coding retained_intron MGP_CBAJ_T0048980.1 MGP_CBAJ_G0023991.1 mouse_genomes_project 18 37490974 37493511 - Dnd1 protein_coding retained_intron MGP_CBAJ_T0048981.1 MGP_CBAJ_G0023991.1 mouse_genomes_project 18 37490976 37493495 - MGP_CBAJ_P0048981 Dnd1 protein_coding protein_coding MGP_CBAJ_T0048982.1 MGP_CBAJ_G0023991.1 mouse_genomes_project 18 37490978 37493495 - Dnd1 protein_coding retained_intron MGP_CBAJ_T0100277.1 MGP_CBAJ_G0038532.1 mouse_genomes_project 18 22351470 22351596 + Gm22495 snoRNA snoRNA MGP_CBAJ_T0048687.1 MGP_CBAJ_G0023881.1 mouse_genomes_project 18 19603744 19612820 + MGP_CBAJ_P0048687 Ttr protein_coding protein_coding MGP_CBAJ_T0049197.1 MGP_CBAJ_G0024091.1 mouse_genomes_project 18 45203552 45206664 + MGP_CBAJ_P0049197 Scgb3a2 protein_coding protein_coding MGP_CBAJ_T0049198.1 MGP_CBAJ_G0024091.1 mouse_genomes_project 18 45203590 45206664 + MGP_CBAJ_P0049198 Scgb3a2 protein_coding protein_coding MGP_CBAJ_T0049199.1 MGP_CBAJ_G0024091.1 mouse_genomes_project 18 45203590 45206664 + MGP_CBAJ_P0049199 Scgb3a2 protein_coding protein_coding MGP_CBAJ_T0010118.1 MGP_CBAJ_G0008256.1 mouse_genomes_project 18 10553623 10553708 + Mir1948 miRNA miRNA MGP_CBAJ_T0048801.1 MGP_CBAJ_G0023932.1 mouse_genomes_project 18 33085702 33114846 + MGP_CBAJ_P0048801 Wdr36 protein_coding protein_coding MGP_CBAJ_T0048802.1 MGP_CBAJ_G0023932.1 mouse_genomes_project 18 33085702 33114916 + MGP_CBAJ_P0048802 Wdr36 protein_coding protein_coding MGP_CBAJ_T0003731.1 MGP_CBAJ_G0003351.1 mouse_genomes_project 18 37671231 37672425 - Gm37751 antisense antisense MGP_CBAJ_T0049062.1 MGP_CBAJ_G0024047.1 mouse_genomes_project 18 38542994 38667943 + MGP_CBAJ_P0049062 Pcdhgb5 protein_coding protein_coding MGP_CBAJ_T0049063.1 MGP_CBAJ_G0024047.1 mouse_genomes_project 18 38543039 38547609 + Pcdhgb5 protein_coding retained_intron MGP_CBAJ_T0013155.1 MGP_CBAJ_G0011267.1 mouse_genomes_project 18 32189668 32189826 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0049078.1 MGP_CBAJ_G0024056.1 mouse_genomes_project 18 38642983 38667943 + MGP_CBAJ_P0049078 Pcdhgc5 protein_coding protein_coding MGP_CBAJ_T0049079.1 MGP_CBAJ_G0024056.1 mouse_genomes_project 18 38643022 38666119 + MGP_CBAJ_P0049079 Pcdhgc5 protein_coding protein_coding MGP_CBAJ_T0049080.1 MGP_CBAJ_G0024056.1 mouse_genomes_project 18 38643036 38666268 + MGP_CBAJ_P0049080 Pcdhgc5 protein_coding protein_coding MGP_CBAJ_T0049081.1 MGP_CBAJ_G0024056.1 mouse_genomes_project 18 38643124 38666232 + Pcdhgc5 protein_coding retained_intron MGP_CBAJ_T0017347.1 MGP_CBAJ_G0015099.1 mouse_genomes_project 18 2501132 2600355 - Gm10125 processed_transcript antisense MGP_CBAJ_T0017348.1 MGP_CBAJ_G0015099.1 mouse_genomes_project 18 2528054 2530743 - Gm10125 processed_transcript retained_intron MGP_CBAJ_T0017349.1 MGP_CBAJ_G0015099.1 mouse_genomes_project 18 2534955 2600355 - Gm10125 processed_transcript processed_transcript MGP_CBAJ_T0017350.1 MGP_CBAJ_G0015099.1 mouse_genomes_project 18 2535027 2600153 - Gm10125 processed_transcript antisense MGP_CBAJ_T0017351.1 MGP_CBAJ_G0015099.1 mouse_genomes_project 18 2577972 2600344 - Gm10125 processed_transcript antisense MGP_CBAJ_T0017352.1 MGP_CBAJ_G0015099.1 mouse_genomes_project 18 2577972 2601472 - Gm10125 processed_transcript antisense MGP_CBAJ_T0017353.1 MGP_CBAJ_G0015099.1 mouse_genomes_project 18 2587308 2600152 - Gm10125 processed_transcript antisense MGP_CBAJ_T0049130.1 MGP_CBAJ_G0024069.1 mouse_genomes_project 18 39532403 39582229 + Arhgap26 protein_coding processed_transcript MGP_CBAJ_T0049131.1 MGP_CBAJ_G0024069.1 mouse_genomes_project 18 39532471 39743069 + Arhgap26 protein_coding processed_transcript MGP_CBAJ_T0049132.1 MGP_CBAJ_G0024069.1 mouse_genomes_project 18 39560936 39579254 + Arhgap26 protein_coding processed_transcript MGP_CBAJ_T0049133.1 MGP_CBAJ_G0024069.1 mouse_genomes_project 18 39617582 39729983 + Arhgap26 protein_coding processed_transcript MGP_CBAJ_T0049134.1 MGP_CBAJ_G0024069.1 mouse_genomes_project 18 39617582 40109979 + MGP_CBAJ_P0049134 Arhgap26 protein_coding protein_coding MGP_CBAJ_T0049142.1 MGP_CBAJ_G0024069.1 mouse_genomes_project 18 39865905 39954827 + Arhgap26 protein_coding processed_transcript MGP_CBAJ_T0049143.1 MGP_CBAJ_G0024069.1 mouse_genomes_project 18 39866164 39911933 + MGP_CBAJ_P0049143 Arhgap26 protein_coding protein_coding MGP_CBAJ_T0049144.1 MGP_CBAJ_G0024069.1 mouse_genomes_project 18 39939257 39954490 + Arhgap26 protein_coding processed_transcript MGP_CBAJ_T0049145.1 MGP_CBAJ_G0024069.1 mouse_genomes_project 18 39980972 40099610 + Arhgap26 protein_coding retained_intron MGP_CBAJ_T0049146.1 MGP_CBAJ_G0024069.1 mouse_genomes_project 18 39980972 40409524 + MGP_CBAJ_P0049146 Arhgap26 protein_coding protein_coding MGP_CBAJ_T0049147.1 MGP_CBAJ_G0024069.1 mouse_genomes_project 18 39981303 40404450 + MGP_CBAJ_P0049147 Arhgap26 protein_coding protein_coding MGP_CBAJ_T0049148.1 MGP_CBAJ_G0024069.1 mouse_genomes_project 18 40098771 40134080 + Arhgap26 protein_coding processed_transcript MGP_CBAJ_T0049149.1 MGP_CBAJ_G0024069.1 mouse_genomes_project 18 40241453 40405790 + MGP_CBAJ_P0049149 Arhgap26 protein_coding protein_coding MGP_CBAJ_T0049150.1 MGP_CBAJ_G0024069.1 mouse_genomes_project 18 40305083 40409524 + MGP_CBAJ_P0049150 Arhgap26 protein_coding protein_coding MGP_CBAJ_T0049151.1 MGP_CBAJ_G0024069.1 mouse_genomes_project 18 40309949 40325883 + Arhgap26 protein_coding processed_transcript MGP_CBAJ_T0049152.1 MGP_CBAJ_G0024069.1 mouse_genomes_project 18 40315291 40404417 + MGP_CBAJ_P0049152 Arhgap26 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049153.1 MGP_CBAJ_G0024069.1 mouse_genomes_project 18 40315291 40391128 + MGP_CBAJ_P0049153 Arhgap26 protein_coding protein_coding MGP_CBAJ_T0049154.1 MGP_CBAJ_G0024069.1 mouse_genomes_project 18 40395857 40400343 + Arhgap26 protein_coding processed_transcript MGP_CBAJ_T0049036.1 MGP_CBAJ_G0024027.1 mouse_genomes_project 18 38260327 38265561 + MGP_CBAJ_P0049036 Pcdhb16 protein_coding protein_coding MGP_CBAJ_T0013137.1 MGP_CBAJ_G0011249.1 mouse_genomes_project 18 7072944 7073947 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0049039.1 MGP_CBAJ_G0024030.1 mouse_genomes_project 18 38279514 38287112 + MGP_CBAJ_P0049039 Pcdhb19 protein_coding protein_coding MGP_CBAJ_T0013157.1 MGP_CBAJ_G0011269.1 mouse_genomes_project 18 37322147 37322901 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0049455.1 MGP_CBAJ_G0024197.1 mouse_genomes_project 18 66311549 66477509 - MGP_CBAJ_P0049455 Spink13 protein_coding protein_coding MGP_CBAJ_T0013140.1 MGP_CBAJ_G0011252.1 mouse_genomes_project 18 10064414 10068309 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010154.1 MGP_CBAJ_G0008292.1 mouse_genomes_project 18 89042555 89042615 + Mir5112 miRNA miRNA MGP_CBAJ_T0049482.1 MGP_CBAJ_G0024204.1 mouse_genomes_project 18 67559593 67864353 + MGP_CBAJ_P0049482 Wdr7 protein_coding protein_coding MGP_CBAJ_T0049019.1 MGP_CBAJ_G0024013.1 mouse_genomes_project 18 38074106 38076920 + MGP_CBAJ_P0049019 Pcdhb2 protein_coding protein_coding MGP_CBAJ_T0049020.1 MGP_CBAJ_G0024013.1 mouse_genomes_project 18 38074134 38075716 + MGP_CBAJ_P0049020 Pcdhb2 protein_coding protein_coding MGP_CBAJ_T0049551.1 MGP_CBAJ_G0024228.1 mouse_genomes_project 18 71880889 71927016 - MGP_CBAJ_P0049551 Afg3l2 protein_coding protein_coding MGP_CBAJ_T0049416.1 MGP_CBAJ_G0024179.1 mouse_genomes_project 18 64623300 64648681 + MGP_CBAJ_P0049416 Csf1r protein_coding protein_coding MGP_CBAJ_T0049417.1 MGP_CBAJ_G0024179.1 mouse_genomes_project 18 64623509 64649696 + MGP_CBAJ_P0049417 Csf1r protein_coding protein_coding MGP_CBAJ_T0049715.1 MGP_CBAJ_G0024270.1 mouse_genomes_project 18 81265642 81630226 + MGP_CBAJ_P0049715 Zbtb7c protein_coding protein_coding MGP_CBAJ_T0049716.1 MGP_CBAJ_G0024270.1 mouse_genomes_project 18 81523891 81628107 + MGP_CBAJ_P0049716 Zbtb7c protein_coding protein_coding MGP_CBAJ_T0049244.1 MGP_CBAJ_G0024114.1 mouse_genomes_project 18 48407689 48428506 - MGP_CBAJ_P0049244 Cdo1 protein_coding protein_coding MGP_CBAJ_T0100288.1 MGP_CBAJ_G0038543.1 mouse_genomes_project 18 36098734 36098930 + Snora74a snoRNA snoRNA MGP_CBAJ_T0049872.1 MGP_CBAJ_G0024317.1 mouse_genomes_project 18 93058499 93173021 + MGP_CBAJ_P0049872 Neto1 protein_coding protein_coding MGP_CBAJ_T0049261.1 MGP_CBAJ_G0024121.1 mouse_genomes_project 18 51764711 51839383 - MGP_CBAJ_P0049261 Dtwd2 protein_coding protein_coding MGP_CBAJ_T0049262.1 MGP_CBAJ_G0024121.1 mouse_genomes_project 18 51765194 51839383 - MGP_CBAJ_P0049262 Dtwd2 protein_coding protein_coding MGP_CBAJ_T0049263.1 MGP_CBAJ_G0024121.1 mouse_genomes_project 18 51765840 51811823 - Dtwd2 protein_coding processed_transcript MGP_CBAJ_T0049044.1 MGP_CBAJ_G0024034.1 mouse_genomes_project 18 38427528 38428897 - MGP_CBAJ_P0049044 Slc25a2 protein_coding protein_coding MGP_CBAJ_T0100290.1 MGP_CBAJ_G0038545.1 mouse_genomes_project 18 47551169 47551296 + Gm26262 snoRNA snoRNA MGP_CBAJ_T0049550.1 MGP_CBAJ_G0024227.1 mouse_genomes_project 18 71866879 71878874 + MGP_CBAJ_P0049550 Tubb6 protein_coding protein_coding MGP_CBAJ_T0013146.1 MGP_CBAJ_G0011258.1 mouse_genomes_project 18 13108143 13108590 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0049492.1 MGP_CBAJ_G0024210.1 mouse_genomes_project 18 68898386 69273518 + MGP_CBAJ_P0049492 Nedd4l protein_coding protein_coding MGP_CBAJ_T0049493.1 MGP_CBAJ_G0024210.1 mouse_genomes_project 18 69060203 69273518 + MGP_CBAJ_P0049493 Nedd4l protein_coding protein_coding MGP_CBAJ_T0049494.1 MGP_CBAJ_G0024210.1 mouse_genomes_project 18 69188333 69273513 + MGP_CBAJ_P0049494 Nedd4l protein_coding unknown_likely_coding MGP_CBAJ_T0011325.1 MGP_CBAJ_G0009463.1 mouse_genomes_project 18 25024298 25024608 - Gm25845 misc_RNA misc_RNA MGP_CBAJ_T0006919.1 MGP_CBAJ_G0005684.1 mouse_genomes_project 18 35184548 35189471 + 2010110K18Rik lincRNA lincRNA MGP_CBAJ_T0006920.1 MGP_CBAJ_G0005684.1 mouse_genomes_project 18 35184651 35191443 + 2010110K18Rik lincRNA lincRNA MGP_CBAJ_T0097996.1 MGP_CBAJ_G0036269.1 mouse_genomes_project 18 35068010 35068129 + n-R5s25 rRNA rRNA MGP_CBAJ_T0049015.1 MGP_CBAJ_G0024009.1 mouse_genomes_project 18 37780233 37945878 + MGP_CBAJ_P0049015 Pcdha12 protein_coding protein_coding MGP_CBAJ_T0003722.1 MGP_CBAJ_G0003345.1 mouse_genomes_project 18 10316084 10319321 - Gm29200 antisense antisense MGP_CBAJ_T0048948.1 MGP_CBAJ_G0023979.1 mouse_genomes_project 18 37200374 37211284 - MGP_CBAJ_P0048948 Hbegf protein_coding protein_coding MGP_CBAJ_T0049237.1 MGP_CBAJ_G0024110.1 mouse_genomes_project 18 48160456 48190203 - MGP_CBAJ_P0049237 Fem1c protein_coding protein_coding MGP_CBAJ_T0049215.1 MGP_CBAJ_G0024103.1 mouse_genomes_project 18 45834466 45849996 + MGP_CBAJ_P0049215 Dcp2 protein_coding protein_coding MGP_CBAJ_T0049216.1 MGP_CBAJ_G0024103.1 mouse_genomes_project 18 45834491 45881140 + MGP_CBAJ_P0049216 Dcp2 protein_coding protein_coding MGP_CBAJ_T0010121.1 MGP_CBAJ_G0008259.1 mouse_genomes_project 18 36096269 36096339 + Mir1949 miRNA miRNA MGP_CBAJ_T0049490.1 MGP_CBAJ_G0024208.1 mouse_genomes_project 18 68434089 68455136 - MGP_CBAJ_P0049490 Nars protein_coding protein_coding MGP_CBAJ_T0010152.1 MGP_CBAJ_G0008290.1 mouse_genomes_project 18 87004498 87004568 - Gm25071 miRNA miRNA MGP_CBAJ_T0010137.1 MGP_CBAJ_G0008275.1 mouse_genomes_project 18 64467474 64467534 + Mir7220 miRNA miRNA MGP_CBAJ_T0099052.1 MGP_CBAJ_G0037307.1 mouse_genomes_project 18 84463207 84463367 + Gm23895 snRNA snRNA MGP_CBAJ_T0049247.1 MGP_CBAJ_G0024117.1 mouse_genomes_project 18 48570545 48629795 + MGP_CBAJ_P0049247 Lvrn protein_coding protein_coding MGP_CBAJ_T0049248.1 MGP_CBAJ_G0024117.1 mouse_genomes_project 18 48570698 48628314 + MGP_CBAJ_P0049248 Lvrn protein_coding unknown_likely_coding MGP_CBAJ_T0000967.1 MGP_CBAJ_G0000899.1 mouse_genomes_project 18 6158408 6160000 + TEC TEC MGP_CBAJ_T0013152.1 MGP_CBAJ_G0011264.1 mouse_genomes_project 18 25264982 25265759 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0049375.1 MGP_CBAJ_G0024169.1 mouse_genomes_project 18 64081187 64115131 - MGP_CBAJ_P0049375 Synpo protein_coding protein_coding MGP_CBAJ_T0049376.1 MGP_CBAJ_G0024169.1 mouse_genomes_project 18 64081196 64115368 - MGP_CBAJ_P0049376 Synpo protein_coding protein_coding MGP_CBAJ_T0049377.1 MGP_CBAJ_G0024169.1 mouse_genomes_project 18 64081204 64125372 - MGP_CBAJ_P0049377 Synpo protein_coding protein_coding MGP_CBAJ_T0049378.1 MGP_CBAJ_G0024169.1 mouse_genomes_project 18 64081205 64088365 - Synpo protein_coding processed_transcript MGP_CBAJ_T0049379.1 MGP_CBAJ_G0024169.1 mouse_genomes_project 18 64088073 64115031 - MGP_CBAJ_P0049379 Synpo protein_coding protein_coding MGP_CBAJ_T0049380.1 MGP_CBAJ_G0024169.1 mouse_genomes_project 18 64088074 64100951 - MGP_CBAJ_P0049380 Synpo protein_coding protein_coding MGP_CBAJ_T0049381.1 MGP_CBAJ_G0024169.1 mouse_genomes_project 18 64088076 64145127 - MGP_CBAJ_P0049381 Synpo protein_coding protein_coding MGP_CBAJ_T0049382.1 MGP_CBAJ_G0024169.1 mouse_genomes_project 18 64091976 64114120 - MGP_CBAJ_P0049382 Synpo protein_coding protein_coding MGP_CBAJ_T0049383.1 MGP_CBAJ_G0024169.1 mouse_genomes_project 18 64092127 64115057 - Synpo protein_coding processed_transcript MGP_CBAJ_T0049384.1 MGP_CBAJ_G0024169.1 mouse_genomes_project 18 64096733 64156936 - Synpo protein_coding processed_transcript MGP_CBAJ_T0049385.1 MGP_CBAJ_G0024169.1 mouse_genomes_project 18 64125016 64145080 - Synpo protein_coding processed_transcript MGP_CBAJ_T0049386.1 MGP_CBAJ_G0024169.1 mouse_genomes_project 18 64142442 64145080 - Synpo protein_coding processed_transcript MGP_CBAJ_T0013154.1 MGP_CBAJ_G0011266.1 mouse_genomes_project 18 30487625 30488000 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0048602.1 MGP_CBAJ_G0023850.1 mouse_genomes_project 18 8086638 8103362 - MGP_CBAJ_P0048602 Abhd3 protein_coding protein_coding MGP_CBAJ_T0048603.1 MGP_CBAJ_G0023850.1 mouse_genomes_project 18 8087282 8157288 - MGP_CBAJ_P0048603 Abhd3 protein_coding protein_coding MGP_CBAJ_T0049412.1 MGP_CBAJ_G0024177.1 mouse_genomes_project 18 64536308 64553890 - MGP_CBAJ_P0049412 Cdx1 protein_coding protein_coding MGP_CBAJ_T0013187.1 MGP_CBAJ_G0011299.1 mouse_genomes_project 18 97020523 97021483 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006904.1 MGP_CBAJ_G0005673.1 mouse_genomes_project 18 9559229 9577804 - Gm6277 lincRNA lincRNA MGP_CBAJ_T0099038.1 MGP_CBAJ_G0037293.1 mouse_genomes_project 18 53943119 53943245 - Gm25785 snRNA snRNA MGP_CBAJ_T0003737.1 MGP_CBAJ_G0003357.1 mouse_genomes_project 18 38452137 38452818 - Gm37118 antisense antisense MGP_CBAJ_T0000968.1 MGP_CBAJ_G0000900.1 mouse_genomes_project 18 36117116 36119276 + TEC TEC MGP_CBAJ_T0013149.1 MGP_CBAJ_G0011261.1 mouse_genomes_project 18 20361983 20362291 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0049072.1 MGP_CBAJ_G0024054.1 mouse_genomes_project 18 38626799 38630179 + Pcdhgc3 protein_coding retained_intron MGP_CBAJ_T0049073.1 MGP_CBAJ_G0024054.1 mouse_genomes_project 18 38626845 38667943 + MGP_CBAJ_P0049073 Pcdhgc3 protein_coding protein_coding MGP_CBAJ_T0049074.1 MGP_CBAJ_G0024054.1 mouse_genomes_project 18 38626851 38667943 + MGP_CBAJ_P0049074 Pcdhgc3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049860.1 MGP_CBAJ_G0024313.1 mouse_genomes_project 18 91191497 91201677 + MGP_CBAJ_P0049860 Fam69c protein_coding protein_coding MGP_CBAJ_T0049861.1 MGP_CBAJ_G0024313.1 mouse_genomes_project 18 91191720 91217364 + MGP_CBAJ_P0049861 Fam69c protein_coding protein_coding MGP_CBAJ_T0049862.1 MGP_CBAJ_G0024313.1 mouse_genomes_project 18 91191755 91216332 + Fam69c protein_coding processed_transcript MGP_CBAJ_T0049863.1 MGP_CBAJ_G0024313.1 mouse_genomes_project 18 91192361 91201454 + Fam69c protein_coding processed_transcript MGP_CBAJ_T0049007.1 MGP_CBAJ_G0024005.1 mouse_genomes_project 18 37734864 37945878 + MGP_CBAJ_P0049007 Pcdha8 protein_coding protein_coding MGP_CBAJ_T0013186.1 MGP_CBAJ_G0011298.1 mouse_genomes_project 18 96545340 96545799 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0049009.1 MGP_CBAJ_G0024007.1 mouse_genomes_project 18 37761496 37945878 + MGP_CBAJ_P0049009 Pcdha11 protein_coding protein_coding MGP_CBAJ_T0049452.1 MGP_CBAJ_G0024194.1 mouse_genomes_project 18 65988619 66169386 + MGP_CBAJ_P0049452 Htr4 protein_coding protein_coding MGP_CBAJ_T0006929.1 MGP_CBAJ_G0005691.1 mouse_genomes_project 18 51894093 51908760 - 1700065O20Rik lincRNA lincRNA MGP_CBAJ_T0099033.1 MGP_CBAJ_G0037288.1 mouse_genomes_project 18 44463921 44464028 - Gm22264 snRNA snRNA MGP_CBAJ_T0013181.1 MGP_CBAJ_G0011293.1 mouse_genomes_project 18 79517341 79517749 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0049709.1 MGP_CBAJ_G0024268.1 mouse_genomes_project 18 80761593 80792206 + MGP_CBAJ_P0049709 Smad7 protein_coding protein_coding MGP_CBAJ_T0049710.1 MGP_CBAJ_G0024268.1 mouse_genomes_project 18 80762942 80791751 + MGP_CBAJ_P0049710 Smad7 protein_coding protein_coding MGP_CBAJ_T0049711.1 MGP_CBAJ_G0024268.1 mouse_genomes_project 18 80763049 80790255 + MGP_CBAJ_P0049711 Smad7 protein_coding protein_coding MGP_CBAJ_T0049712.1 MGP_CBAJ_G0024268.1 mouse_genomes_project 18 80764076 80790634 + MGP_CBAJ_P0049712 Smad7 protein_coding protein_coding MGP_CBAJ_T0049713.1 MGP_CBAJ_G0024268.1 mouse_genomes_project 18 80769011 80790270 + Smad7 protein_coding processed_transcript MGP_CBAJ_T0048662.1 MGP_CBAJ_G0023868.1 mouse_genomes_project 18 12657658 12718446 - MGP_CBAJ_P0048662 Ss18 protein_coding protein_coding MGP_CBAJ_T0048663.1 MGP_CBAJ_G0023868.1 mouse_genomes_project 18 12660724 12718594 - MGP_CBAJ_P0048663 Ss18 protein_coding protein_coding MGP_CBAJ_T0048664.1 MGP_CBAJ_G0023868.1 mouse_genomes_project 18 12660724 12718594 - MGP_CBAJ_P0048664 Ss18 protein_coding protein_coding MGP_CBAJ_T0049423.1 MGP_CBAJ_G0024182.1 mouse_genomes_project 18 64758058 64837424 + MGP_CBAJ_P0049423 Pde6a protein_coding protein_coding MGP_CBAJ_T0049424.1 MGP_CBAJ_G0024182.1 mouse_genomes_project 18 64819540 64837424 + MGP_CBAJ_P0049424 Pde6a protein_coding protein_coding MGP_CBAJ_T0049558.1 MGP_CBAJ_G0024232.1 mouse_genomes_project 18 72143373 72155926 + MGP_CBAJ_P0049558 Psmg2 protein_coding protein_coding MGP_CBAJ_T0000974.1 MGP_CBAJ_G0000906.1 mouse_genomes_project 18 58283208 58284201 - TEC TEC MGP_CBAJ_T0048499.1 MGP_CBAJ_G0023824.1 mouse_genomes_project 18 1315539 1337278 + MGP_CBAJ_P0048499 Mtpap protein_coding protein_coding MGP_CBAJ_T0099042.1 MGP_CBAJ_G0037297.1 mouse_genomes_project 18 64656933 64657038 - Gm26403 snRNA snRNA MGP_CBAJ_T0049365.1 MGP_CBAJ_G0024164.1 mouse_genomes_project 18 63870072 63872909 + MGP_CBAJ_P0049365 Iigp1 protein_coding protein_coding MGP_CBAJ_T0049316.1 MGP_CBAJ_G0024143.1 mouse_genomes_project 18 59360634 59444160 + MGP_CBAJ_P0049316 Gramd3 protein_coding protein_coding MGP_CBAJ_T0049307.1 MGP_CBAJ_G0024137.1 mouse_genomes_project 18 55768663 55928867 + MGP_CBAJ_P0049307 Snx24 protein_coding protein_coding MGP_CBAJ_T0049308.1 MGP_CBAJ_G0024137.1 mouse_genomes_project 18 55768770 55928867 + MGP_CBAJ_P0049308 Snx24 protein_coding protein_coding MGP_CBAJ_T0049579.1 MGP_CBAJ_G0024240.1 mouse_genomes_project 18 72967969 72981600 - MGP_CBAJ_P0049579 Mc2r protein_coding protein_coding MGP_CBAJ_T0049725.1 MGP_CBAJ_G0024273.1 mouse_genomes_project 18 82504902 82516495 + MGP_CBAJ_P0049725 Ier3ip1 protein_coding protein_coding MGP_CBAJ_T0049726.1 MGP_CBAJ_G0024273.1 mouse_genomes_project 18 82504930 82516495 + Ier3ip1 protein_coding processed_transcript MGP_CBAJ_T0049727.1 MGP_CBAJ_G0024273.1 mouse_genomes_project 18 82504948 82514647 + Ier3ip1 protein_coding retained_intron MGP_CBAJ_T0049729.1 MGP_CBAJ_G0024273.1 mouse_genomes_project 18 82514183 82515581 + Ier3ip1 protein_coding retained_intron MGP_CBAJ_T0049202.1 MGP_CBAJ_G0024094.1 mouse_genomes_project 18 45455012 45459353 + MGP_CBAJ_P0049202 Spink14 protein_coding protein_coding MGP_CBAJ_T0049203.1 MGP_CBAJ_G0024094.1 mouse_genomes_project 18 45455837 45459353 + MGP_CBAJ_P0049203 Spink14 protein_coding protein_coding MGP_CBAJ_T0049326.1 MGP_CBAJ_G0024145.1 mouse_genomes_project 18 59508897 59533356 + MGP_CBAJ_P0049326 Phax protein_coding protein_coding MGP_CBAJ_T0049327.1 MGP_CBAJ_G0024145.1 mouse_genomes_project 18 59509047 59526462 + MGP_CBAJ_P0049327 Phax protein_coding protein_coding MGP_CBAJ_T0049328.1 MGP_CBAJ_G0024145.1 mouse_genomes_project 18 59518997 59533879 + MGP_CBAJ_P0049328 Phax protein_coding protein_coding MGP_CBAJ_T0049858.1 MGP_CBAJ_G0024312.1 mouse_genomes_project 18 91118897 91151040 - MGP_CBAJ_P0049858 Cndp2 protein_coding protein_coding MGP_CBAJ_T0049859.1 MGP_CBAJ_G0024312.1 mouse_genomes_project 18 91118897 91147403 - MGP_CBAJ_P0049859 Cndp2 protein_coding protein_coding MGP_CBAJ_T0048610.1 MGP_CBAJ_G0023853.1 mouse_genomes_project 18 9357693 9473047 + MGP_CBAJ_P0048610 Rbbp8 protein_coding protein_coding MGP_CBAJ_T0048611.1 MGP_CBAJ_G0023853.1 mouse_genomes_project 18 9378583 9473047 + MGP_CBAJ_P0048611 Rbbp8 protein_coding protein_coding MGP_CBAJ_T0099043.1 MGP_CBAJ_G0037298.1 mouse_genomes_project 18 65040848 65040949 - Gm25834 snRNA snRNA MGP_CBAJ_T0048791.1 MGP_CBAJ_G0023927.1 mouse_genomes_project 18 32333979 32418650 + MGP_CBAJ_P0048791 Map3k2 protein_coding protein_coding MGP_CBAJ_T0048773.1 MGP_CBAJ_G0023913.1 mouse_genomes_project 18 31550466 31560074 - MGP_CBAJ_P0048773 Syt4 protein_coding protein_coding MGP_CBAJ_T0098003.1 MGP_CBAJ_G0036276.1 mouse_genomes_project 18 80341941 80342033 + Gm27781 rRNA rRNA MGP_CBAJ_T0048782.1 MGP_CBAJ_G0023920.1 mouse_genomes_project 18 31970159 31970712 - MGP_CBAJ_P0048782 protein_coding protein_coding MGP_CBAJ_T0100284.1 MGP_CBAJ_G0038539.1 mouse_genomes_project 18 34418455 34418581 + Gm24432 snoRNA snoRNA MGP_CBAJ_T0048748.1 MGP_CBAJ_G0023905.1 mouse_genomes_project 18 23971766 24019615 + MGP_CBAJ_P0048748 Mocos protein_coding protein_coding MGP_CBAJ_T0048800.1 MGP_CBAJ_G0023931.1 mouse_genomes_project 18 33062377 33066788 + MGP_CBAJ_P0048800 Tslp protein_coding protein_coding MGP_CBAJ_T0049706.1 MGP_CBAJ_G0024265.1 mouse_genomes_project 18 80317172 80319599 + MGP_CBAJ_P0049706 Rpl17 protein_coding unknown_likely_coding MGP_CBAJ_T0048769.1 MGP_CBAJ_G0023912.1 mouse_genomes_project 18 31028324 31410653 - MGP_CBAJ_P0048769 Rit2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048770.1 MGP_CBAJ_G0023912.1 mouse_genomes_project 18 31029150 31410496 - MGP_CBAJ_P0048770 Rit2 protein_coding protein_coding MGP_CBAJ_T0048771.1 MGP_CBAJ_G0023912.1 mouse_genomes_project 18 31227572 31298069 - Rit2 protein_coding processed_transcript MGP_CBAJ_T0048772.1 MGP_CBAJ_G0023912.1 mouse_genomes_project 18 31287011 31410474 - MGP_CBAJ_P0048772 Rit2 protein_coding protein_coding MGP_CBAJ_T0013160.1 MGP_CBAJ_G0011272.1 mouse_genomes_project 18 39111863 39112417 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010122.1 MGP_CBAJ_G0008260.1 mouse_genomes_project 18 36098834 36098945 + miRNA miRNA MGP_CBAJ_T0049004.1 MGP_CBAJ_G0024002.1 mouse_genomes_project 18 37715683 38659344 + MGP_CBAJ_P0049004 Gm37013 protein_coding protein_coding MGP_CBAJ_T0048848.1 MGP_CBAJ_G0023947.1 mouse_genomes_project 18 35043784 35053537 + MGP_CBAJ_P0048848 Kif20a protein_coding protein_coding MGP_CBAJ_T0048849.1 MGP_CBAJ_G0023947.1 mouse_genomes_project 18 35044172 35052881 + MGP_CBAJ_P0048849 Kif20a protein_coding unknown_likely_coding MGP_CBAJ_T0048850.1 MGP_CBAJ_G0023947.1 mouse_genomes_project 18 35044193 35053537 + MGP_CBAJ_P0048850 Kif20a protein_coding protein_coding MGP_CBAJ_T0049050.1 MGP_CBAJ_G0024039.1 mouse_genomes_project 18 38471837 38667940 + MGP_CBAJ_P0049050 Pcdhgb1 protein_coding protein_coding MGP_CBAJ_T0049051.1 MGP_CBAJ_G0024039.1 mouse_genomes_project 18 38471861 38486508 + Pcdhgb1 protein_coding processed_transcript MGP_CBAJ_T0048931.1 MGP_CBAJ_G0023974.1 mouse_genomes_project 18 36583080 36635906 + MGP_CBAJ_P0048931 Psd2 protein_coding protein_coding MGP_CBAJ_T0048932.1 MGP_CBAJ_G0023974.1 mouse_genomes_project 18 36583315 36635906 + MGP_CBAJ_P0048932 Psd2 protein_coding protein_coding MGP_CBAJ_T0048933.1 MGP_CBAJ_G0023974.1 mouse_genomes_project 18 36583317 36635909 + MGP_CBAJ_P0048933 Psd2 protein_coding protein_coding MGP_CBAJ_T0048934.1 MGP_CBAJ_G0023974.1 mouse_genomes_project 18 36583352 36635774 + MGP_CBAJ_P0048934 Psd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048935.1 MGP_CBAJ_G0023974.1 mouse_genomes_project 18 36583355 36635868 + MGP_CBAJ_P0048935 Psd2 protein_coding protein_coding MGP_CBAJ_T0048936.1 MGP_CBAJ_G0023974.1 mouse_genomes_project 18 36605130 36623812 + Psd2 protein_coding retained_intron MGP_CBAJ_T0097998.1 MGP_CBAJ_G0036271.1 mouse_genomes_project 18 61448165 61448269 - Gm25660 rRNA rRNA MGP_CBAJ_T0097791.1 MGP_CBAJ_G0036064.1 mouse_genomes_project 18 7543632 7544145 - pseudogene pseudogene MGP_CBAJ_T0049559.1 MGP_CBAJ_G0024233.1 mouse_genomes_project 18 72166628 72233251 - MGP_CBAJ_P0049559 Ptpn2 protein_coding protein_coding MGP_CBAJ_T0049560.1 MGP_CBAJ_G0024233.1 mouse_genomes_project 18 72166629 72233266 - MGP_CBAJ_P0049560 Ptpn2 protein_coding protein_coding MGP_CBAJ_T0049561.1 MGP_CBAJ_G0024233.1 mouse_genomes_project 18 72173596 72233273 - MGP_CBAJ_P0049561 Ptpn2 protein_coding protein_coding MGP_CBAJ_T0049562.1 MGP_CBAJ_G0024233.1 mouse_genomes_project 18 72178177 72197679 - Ptpn2 protein_coding processed_transcript MGP_CBAJ_T0049066.1 MGP_CBAJ_G0024049.1 mouse_genomes_project 18 38554069 38667943 + MGP_CBAJ_P0049066 Pcdhgb6 protein_coding protein_coding MGP_CBAJ_T0049113.1 MGP_CBAJ_G0024062.1 mouse_genomes_project 18 39049522 39075643 - MGP_CBAJ_P0049113 Pcdh1 protein_coding protein_coding MGP_CBAJ_T0049114.1 MGP_CBAJ_G0024062.1 mouse_genomes_project 18 39052495 39066762 - MGP_CBAJ_P0049114 Pcdh1 protein_coding protein_coding MGP_CBAJ_T0049115.1 MGP_CBAJ_G0024062.1 mouse_genomes_project 18 39060288 39073357 - MGP_CBAJ_P0049115 Pcdh1 protein_coding protein_coding MGP_CBAJ_T0049116.1 MGP_CBAJ_G0024062.1 mouse_genomes_project 18 39060288 39075567 - MGP_CBAJ_P0049116 Pcdh1 protein_coding protein_coding MGP_CBAJ_T0049117.1 MGP_CBAJ_G0024062.1 mouse_genomes_project 18 39067042 39074149 - MGP_CBAJ_P0049117 Pcdh1 protein_coding protein_coding MGP_CBAJ_T0049118.1 MGP_CBAJ_G0024062.1 mouse_genomes_project 18 39067042 39067439 - MGP_CBAJ_P0049118 Pcdh1 protein_coding protein_coding MGP_CBAJ_T0017373.1 MGP_CBAJ_G0015106.1 mouse_genomes_project 18 52177871 52188747 - C030005K06Rik processed_transcript processed_transcript MGP_CBAJ_T0017374.1 MGP_CBAJ_G0015106.1 mouse_genomes_project 18 52181294 52188931 - C030005K06Rik processed_transcript processed_transcript MGP_CBAJ_T0017375.1 MGP_CBAJ_G0015106.1 mouse_genomes_project 18 52187364 52188931 - C030005K06Rik processed_transcript processed_transcript MGP_CBAJ_T0017376.1 MGP_CBAJ_G0015106.1 mouse_genomes_project 18 52187384 52188692 - C030005K06Rik processed_transcript processed_transcript MGP_CBAJ_T0013185.1 MGP_CBAJ_G0011297.1 mouse_genomes_project 18 96544777 96545102 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0049006.1 MGP_CBAJ_G0024004.1 mouse_genomes_project 18 37725818 38659344 + MGP_CBAJ_P0049006 Gm37388 protein_coding protein_coding MGP_CBAJ_T0049717.1 MGP_CBAJ_G0024271.1 mouse_genomes_project 18 81737983 81815114 + MGP_CBAJ_P0049717 Smad2 protein_coding protein_coding MGP_CBAJ_T0049718.1 MGP_CBAJ_G0024271.1 mouse_genomes_project 18 81738104 81814113 + MGP_CBAJ_P0049718 Smad2 protein_coding protein_coding MGP_CBAJ_T0049719.1 MGP_CBAJ_G0024271.1 mouse_genomes_project 18 81738449 81802853 + MGP_CBAJ_P0049719 Smad2 protein_coding protein_coding MGP_CBAJ_T0049720.1 MGP_CBAJ_G0024271.1 mouse_genomes_project 18 81738643 81804296 + MGP_CBAJ_P0049720 Smad2 protein_coding protein_coding MGP_CBAJ_T0049721.1 MGP_CBAJ_G0024271.1 mouse_genomes_project 18 81769314 81814677 + MGP_CBAJ_P0049721 Smad2 protein_coding protein_coding MGP_CBAJ_T0049722.1 MGP_CBAJ_G0024271.1 mouse_genomes_project 18 81770687 81812025 + MGP_CBAJ_P0049722 Smad2 protein_coding protein_coding MGP_CBAJ_T0049723.1 MGP_CBAJ_G0024271.1 mouse_genomes_project 18 81770687 81804240 + MGP_CBAJ_P0049723 Smad2 protein_coding protein_coding MGP_CBAJ_T0049181.1 MGP_CBAJ_G0024085.1 mouse_genomes_project 18 43963461 43965094 - MGP_CBAJ_P0049181 Gpr151 protein_coding protein_coding MGP_CBAJ_T0000976.1 MGP_CBAJ_G0000908.1 mouse_genomes_project 18 69738640 69739901 + TEC TEC MGP_CBAJ_T0011329.1 MGP_CBAJ_G0009467.1 mouse_genomes_project 18 39525245 39525364 + Gm27804 misc_RNA misc_RNA MGP_CBAJ_T0049728.1 MGP_CBAJ_G0024274.1 mouse_genomes_project 18 82505011 82545611 + MGP_CBAJ_P0049728 Hdhd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049730.1 MGP_CBAJ_G0024274.1 mouse_genomes_project 18 82519004 82535840 + MGP_CBAJ_P0049730 Hdhd2 protein_coding protein_coding MGP_CBAJ_T0049731.1 MGP_CBAJ_G0024274.1 mouse_genomes_project 18 82519004 82546333 + MGP_CBAJ_P0049731 Hdhd2 protein_coding protein_coding MGP_CBAJ_T0049732.1 MGP_CBAJ_G0024274.1 mouse_genomes_project 18 82519015 82545611 + MGP_CBAJ_P0049732 Hdhd2 protein_coding protein_coding MGP_CBAJ_T0049733.1 MGP_CBAJ_G0024274.1 mouse_genomes_project 18 82519015 82535840 + MGP_CBAJ_P0049733 Hdhd2 protein_coding protein_coding MGP_CBAJ_T0049734.1 MGP_CBAJ_G0024274.1 mouse_genomes_project 18 82519040 82530666 + MGP_CBAJ_P0049734 Hdhd2 protein_coding protein_coding MGP_CBAJ_T0049735.1 MGP_CBAJ_G0024274.1 mouse_genomes_project 18 82519273 82547064 + MGP_CBAJ_P0049735 Hdhd2 protein_coding protein_coding MGP_CBAJ_T0049736.1 MGP_CBAJ_G0024274.1 mouse_genomes_project 18 82519273 82528826 + MGP_CBAJ_P0049736 Hdhd2 protein_coding protein_coding MGP_CBAJ_T0049737.1 MGP_CBAJ_G0024274.1 mouse_genomes_project 18 82519306 82546333 + MGP_CBAJ_P0049737 Hdhd2 protein_coding protein_coding MGP_CBAJ_T0049738.1 MGP_CBAJ_G0024274.1 mouse_genomes_project 18 82519325 82547064 + MGP_CBAJ_P0049738 Hdhd2 protein_coding protein_coding MGP_CBAJ_T0010123.1 MGP_CBAJ_G0008261.1 mouse_genomes_project 18 36571167 36571259 + Gm23882 miRNA miRNA MGP_CBAJ_T0048776.1 MGP_CBAJ_G0023916.1 mouse_genomes_project 18 31761680 31854127 + MGP_CBAJ_P0048776 Sap130 protein_coding protein_coding MGP_CBAJ_T0048777.1 MGP_CBAJ_G0023916.1 mouse_genomes_project 18 31762396 31854130 + MGP_CBAJ_P0048777 Sap130 protein_coding unknown_likely_coding MGP_CBAJ_T0049766.1 MGP_CBAJ_G0024281.1 mouse_genomes_project 18 83337942 83433919 - MGP_CBAJ_P0049766 8030462N17Rik protein_coding protein_coding MGP_CBAJ_T0049208.1 MGP_CBAJ_G0024098.1 mouse_genomes_project 18 45604871 45615983 - MGP_CBAJ_P0049208 Spinkl protein_coding protein_coding MGP_CBAJ_T0100292.1 MGP_CBAJ_G0038547.1 mouse_genomes_project 18 57808798 57808891 - Gm24183 snoRNA snoRNA MGP_CBAJ_T0013151.1 MGP_CBAJ_G0011263.1 mouse_genomes_project 18 24793205 24793737 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003751.1 MGP_CBAJ_G0003369.1 mouse_genomes_project 18 65355355 65357222 + 1500015A07Rik antisense antisense MGP_CBAJ_T0003752.1 MGP_CBAJ_G0003369.1 mouse_genomes_project 18 65355398 65364810 + 1500015A07Rik antisense antisense MGP_CBAJ_T0003753.1 MGP_CBAJ_G0003369.1 mouse_genomes_project 18 65363251 65364802 + 1500015A07Rik antisense antisense MGP_CBAJ_T0048700.1 MGP_CBAJ_G0023890.1 mouse_genomes_project 18 20913098 21302850 - MGP_CBAJ_P0048700 Ccdc178 protein_coding protein_coding MGP_CBAJ_T0048701.1 MGP_CBAJ_G0023890.1 mouse_genomes_project 18 20913499 21297946 - MGP_CBAJ_P0048701 Ccdc178 protein_coding protein_coding MGP_CBAJ_T0048973.1 MGP_CBAJ_G0023985.1 mouse_genomes_project 18 37399082 37412903 - MGP_CBAJ_P0048973 E230025N22Rik protein_coding protein_coding MGP_CBAJ_T0006922.1 MGP_CBAJ_G0005686.1 mouse_genomes_project 18 38410108 38410963 + 4930517L18Rik lincRNA lincRNA MGP_CBAJ_T0099044.1 MGP_CBAJ_G0037299.1 mouse_genomes_project 18 67344426 67344489 + Gm23581 snRNA snRNA MGP_CBAJ_T0011319.1 MGP_CBAJ_G0009457.1 mouse_genomes_project 18 14269820 14270121 + Gm22389 misc_RNA misc_RNA MGP_CBAJ_T0011333.1 MGP_CBAJ_G0009471.1 mouse_genomes_project 18 45200375 45200688 + Gm23894 misc_RNA misc_RNA MGP_CBAJ_T0010128.1 MGP_CBAJ_G0008266.1 mouse_genomes_project 18 42596920 42597011 - Gm44476 miRNA miRNA MGP_CBAJ_T0049887.1 MGP_CBAJ_G0024324.1 mouse_genomes_project 18 97717749 97730390 + MGP_CBAJ_P0049887 unknown_likely_coding unknown_likely_coding MGP_CBAJ_T0049846.1 MGP_CBAJ_G0024308.1 mouse_genomes_project 18 90402947 90478173 - MGP_CBAJ_P0049846 Tshz1 protein_coding protein_coding MGP_CBAJ_T0049847.1 MGP_CBAJ_G0024308.1 mouse_genomes_project 18 90403402 90478159 - Tshz1 protein_coding processed_transcript MGP_CBAJ_T0003735.1 MGP_CBAJ_G0003355.1 mouse_genomes_project 18 37930332 37930771 - Gm38097 antisense antisense MGP_CBAJ_T0049882.1 MGP_CBAJ_G0024321.1 mouse_genomes_project 18 96166300 96250301 + MGP_CBAJ_P0049882 Cd226 protein_coding protein_coding MGP_CBAJ_T0049883.1 MGP_CBAJ_G0024321.1 mouse_genomes_project 18 96166367 96249261 + MGP_CBAJ_P0049883 Cd226 protein_coding protein_coding MGP_CBAJ_T0013177.1 MGP_CBAJ_G0011289.1 mouse_genomes_project 18 58812017 58813023 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003758.1 MGP_CBAJ_G0003371.1 mouse_genomes_project 18 74680252 74706013 - 1700061H18Rik antisense antisense MGP_CBAJ_T0003759.1 MGP_CBAJ_G0003371.1 mouse_genomes_project 18 74683871 74706000 - 1700061H18Rik antisense antisense MGP_CBAJ_T0048912.1 MGP_CBAJ_G0023965.1 mouse_genomes_project 18 36200387 36202489 - MGP_CBAJ_P0048912 Mzb1 protein_coding protein_coding MGP_CBAJ_T0048765.1 MGP_CBAJ_G0023911.1 mouse_genomes_project 18 30239888 30317437 + MGP_CBAJ_P0048765 Pik3c3 protein_coding protein_coding MGP_CBAJ_T0048766.1 MGP_CBAJ_G0023911.1 mouse_genomes_project 18 30240011 30300279 + MGP_CBAJ_P0048766 Pik3c3 protein_coding protein_coding MGP_CBAJ_T0048767.1 MGP_CBAJ_G0023911.1 mouse_genomes_project 18 30240013 30312427 + MGP_CBAJ_P0048767 Pik3c3 protein_coding protein_coding MGP_CBAJ_T0048768.1 MGP_CBAJ_G0023911.1 mouse_genomes_project 18 30240068 30317431 + MGP_CBAJ_P0048768 Pik3c3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0100279.1 MGP_CBAJ_G0038534.1 mouse_genomes_project 18 28050905 28051037 + Gm24246 snoRNA snoRNA MGP_CBAJ_T0100287.1 MGP_CBAJ_G0038542.1 mouse_genomes_project 18 36096194 36096335 + Mir1949 snoRNA snoRNA MGP_CBAJ_T0049877.1 MGP_CBAJ_G0024319.1 mouse_genomes_project 18 95590777 95678291 - protein_coding processed_transcript MGP_CBAJ_T0049878.1 MGP_CBAJ_G0024319.1 mouse_genomes_project 18 95594248 95834660 - protein_coding processed_transcript MGP_CBAJ_T0049879.1 MGP_CBAJ_G0024319.1 mouse_genomes_project 18 95796341 95834643 - MGP_CBAJ_P0049879 protein_coding protein_coding MGP_CBAJ_T0049880.1 MGP_CBAJ_G0024319.1 mouse_genomes_project 18 95802173 95870003 - MGP_CBAJ_P0049880 protein_coding protein_coding MGP_CBAJ_T0049681.1 MGP_CBAJ_G0024256.1 mouse_genomes_project 18 79094531 79136854 - MGP_CBAJ_P0049681 Mapk4 protein_coding protein_coding MGP_CBAJ_T0049682.1 MGP_CBAJ_G0024256.1 mouse_genomes_project 18 79094535 79250790 - MGP_CBAJ_P0049682 Mapk4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049683.1 MGP_CBAJ_G0024256.1 mouse_genomes_project 18 79137588 79251758 - Mapk4 protein_coding processed_transcript MGP_CBAJ_T0049814.1 MGP_CBAJ_G0024300.1 mouse_genomes_project 18 86467602 86531017 - MGP_CBAJ_P0049814 Ctdp1 protein_coding protein_coding MGP_CBAJ_T0049815.1 MGP_CBAJ_G0024300.1 mouse_genomes_project 18 86467608 86500503 - MGP_CBAJ_P0049815 Ctdp1 protein_coding protein_coding MGP_CBAJ_T0049816.1 MGP_CBAJ_G0024300.1 mouse_genomes_project 18 86468379 86500432 - Ctdp1 protein_coding processed_transcript MGP_CBAJ_T0011340.1 MGP_CBAJ_G0009478.1 mouse_genomes_project 18 83545066 83545419 - Gm23954 misc_RNA misc_RNA MGP_CBAJ_T0049884.1 MGP_CBAJ_G0024322.1 mouse_genomes_project 18 96285999 96820499 - MGP_CBAJ_P0049884 Dok6 protein_coding protein_coding MGP_CBAJ_T0049885.1 MGP_CBAJ_G0024322.1 mouse_genomes_project 18 96472412 96576047 - Dok6 protein_coding retained_intron MGP_CBAJ_T0049038.1 MGP_CBAJ_G0024029.1 mouse_genomes_project 18 38271988 38277029 + MGP_CBAJ_P0049038 Pcdhb18 protein_coding protein_coding MGP_CBAJ_T0049456.1 MGP_CBAJ_G0024198.1 mouse_genomes_project 18 66357974 66376770 + Spink10 protein_coding processed_transcript MGP_CBAJ_T0049457.1 MGP_CBAJ_G0024198.1 mouse_genomes_project 18 66365017 66378915 + MGP_CBAJ_P0049457 Spink10 protein_coding protein_coding MGP_CBAJ_T0049458.1 MGP_CBAJ_G0024198.1 mouse_genomes_project 18 66365385 66367285 + Spink10 protein_coding processed_transcript MGP_CBAJ_T0049459.1 MGP_CBAJ_G0024198.1 mouse_genomes_project 18 66365439 66371640 + Spink10 protein_coding processed_transcript MGP_CBAJ_T0049289.1 MGP_CBAJ_G0024127.1 mouse_genomes_project 18 53389484 53610180 + MGP_CBAJ_P0049289 Prr16 protein_coding protein_coding MGP_CBAJ_T0049687.1 MGP_CBAJ_G0024259.1 mouse_genomes_project 18 79420005 79425354 + MGP_CBAJ_P0049687 Cxxc1 protein_coding protein_coding MGP_CBAJ_T0013167.1 MGP_CBAJ_G0011279.1 mouse_genomes_project 18 46607953 46608943 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0049345.1 MGP_CBAJ_G0024153.1 mouse_genomes_project 18 60646177 60865348 + MGP_CBAJ_P0049345 1700011I03Rik protein_coding protein_coding MGP_CBAJ_T0049346.1 MGP_CBAJ_G0024153.1 mouse_genomes_project 18 60646226 60865348 + MGP_CBAJ_P0049346 1700011I03Rik protein_coding protein_coding MGP_CBAJ_T0049347.1 MGP_CBAJ_G0024153.1 mouse_genomes_project 18 60646279 60682712 + MGP_CBAJ_P0049347 1700011I03Rik protein_coding protein_coding MGP_CBAJ_T0049348.1 MGP_CBAJ_G0024153.1 mouse_genomes_project 18 60678941 60865289 + MGP_CBAJ_P0049348 1700011I03Rik protein_coding protein_coding MGP_CBAJ_T0049293.1 MGP_CBAJ_G0024131.1 mouse_genomes_project 18 54943939 54963912 - MGP_CBAJ_P0049293 Lox protein_coding protein_coding MGP_CBAJ_T0049294.1 MGP_CBAJ_G0024131.1 mouse_genomes_project 18 54945108 54963753 - MGP_CBAJ_P0049294 Lox protein_coding protein_coding MGP_CBAJ_T0000977.1 MGP_CBAJ_G0000909.1 mouse_genomes_project 18 86347967 86349488 - TEC TEC MGP_CBAJ_T0048553.1 MGP_CBAJ_G0023832.1 mouse_genomes_project 18 3658779 3696561 + MGP_CBAJ_P0048553 4921524L21Rik protein_coding protein_coding MGP_CBAJ_T0048742.1 MGP_CBAJ_G0023902.1 mouse_genomes_project 18 23803753 23852376 - MGP_CBAJ_P0048742 Rprd1a protein_coding protein_coding MGP_CBAJ_T0006915.1 MGP_CBAJ_G0005681.1 mouse_genomes_project 18 32900527 33085765 - 4930455D15Rik lincRNA lincRNA MGP_CBAJ_T0099049.1 MGP_CBAJ_G0037304.1 mouse_genomes_project 18 70077959 70078019 - Gm25150 snRNA snRNA MGP_CBAJ_T0048789.1 MGP_CBAJ_G0023925.1 mouse_genomes_project 18 32222208 32263219 + MGP_CBAJ_P0048789 Iws1 protein_coding protein_coding MGP_CBAJ_T0006906.1 MGP_CBAJ_G0005675.1 mouse_genomes_project 18 15352740 15496680 + 1700001G01Rik lincRNA lincRNA MGP_CBAJ_T0006907.1 MGP_CBAJ_G0005675.1 mouse_genomes_project 18 15352765 15378528 + 1700001G01Rik lincRNA lincRNA MGP_CBAJ_T0006908.1 MGP_CBAJ_G0005675.1 mouse_genomes_project 18 15369335 15496680 + 1700001G01Rik lincRNA lincRNA MGP_CBAJ_T0006909.1 MGP_CBAJ_G0005675.1 mouse_genomes_project 18 15484885 15496635 + 1700001G01Rik lincRNA lincRNA MGP_CBAJ_T0049095.1 MGP_CBAJ_G0024059.1 mouse_genomes_project 18 38790513 38793980 + MGP_CBAJ_P0049095 Rell2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049096.1 MGP_CBAJ_G0024059.1 mouse_genomes_project 18 38790573 38793980 + MGP_CBAJ_P0049096 Rell2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049097.1 MGP_CBAJ_G0024059.1 mouse_genomes_project 18 38791017 38794607 + MGP_CBAJ_P0049097 Rell2 protein_coding protein_coding MGP_CBAJ_T0049098.1 MGP_CBAJ_G0024059.1 mouse_genomes_project 18 38791022 38793113 + MGP_CBAJ_P0049098 Rell2 protein_coding protein_coding MGP_CBAJ_T0049099.1 MGP_CBAJ_G0024059.1 mouse_genomes_project 18 38791058 38794598 + MGP_CBAJ_P0049099 Rell2 protein_coding protein_coding MGP_CBAJ_T0049100.1 MGP_CBAJ_G0024059.1 mouse_genomes_project 18 38792127 38793474 + Rell2 protein_coding retained_intron MGP_CBAJ_T0049101.1 MGP_CBAJ_G0024059.1 mouse_genomes_project 18 38792168 38793604 + Rell2 protein_coding retained_intron MGP_CBAJ_T0049429.1 MGP_CBAJ_G0024185.1 mouse_genomes_project 18 65149640 65198285 + MGP_CBAJ_P0049429 Csnk1a1 protein_coding protein_coding MGP_CBAJ_T0049430.1 MGP_CBAJ_G0024185.1 mouse_genomes_project 18 65149679 65196530 + MGP_CBAJ_P0049430 Csnk1a1 protein_coding protein_coding MGP_CBAJ_T0049431.1 MGP_CBAJ_G0024185.1 mouse_genomes_project 18 65149684 65193867 + MGP_CBAJ_P0049431 Csnk1a1 protein_coding protein_coding MGP_CBAJ_T0049432.1 MGP_CBAJ_G0024185.1 mouse_genomes_project 18 65149684 65190378 + MGP_CBAJ_P0049432 Csnk1a1 protein_coding protein_coding MGP_CBAJ_T0049433.1 MGP_CBAJ_G0024185.1 mouse_genomes_project 18 65149694 65190524 + MGP_CBAJ_P0049433 Csnk1a1 protein_coding protein_coding MGP_CBAJ_T0049434.1 MGP_CBAJ_G0024185.1 mouse_genomes_project 18 65149701 65152605 + Csnk1a1 protein_coding retained_intron MGP_CBAJ_T0049435.1 MGP_CBAJ_G0024185.1 mouse_genomes_project 18 65149705 65196408 + MGP_CBAJ_P0049435 Csnk1a1 protein_coding protein_coding MGP_CBAJ_T0049436.1 MGP_CBAJ_G0024185.1 mouse_genomes_project 18 65150054 65195757 + MGP_CBAJ_P0049436 Csnk1a1 protein_coding protein_coding MGP_CBAJ_T0049437.1 MGP_CBAJ_G0024185.1 mouse_genomes_project 18 65180909 65190380 + MGP_CBAJ_P0049437 Csnk1a1 protein_coding protein_coding MGP_CBAJ_T0049438.1 MGP_CBAJ_G0024185.1 mouse_genomes_project 18 65191077 65194735 + Csnk1a1 protein_coding processed_transcript MGP_CBAJ_T0098000.1 MGP_CBAJ_G0036273.1 mouse_genomes_project 18 73833970 73834104 - Gm23536 rRNA rRNA MGP_CBAJ_T0048870.1 MGP_CBAJ_G0023956.1 mouse_genomes_project 18 35403307 35422471 - MGP_CBAJ_P0048870 Hspa9 protein_coding protein_coding MGP_CBAJ_T0048871.1 MGP_CBAJ_G0023956.1 mouse_genomes_project 18 35404160 35405204 - Hspa9 protein_coding retained_intron MGP_CBAJ_T0048872.1 MGP_CBAJ_G0023956.1 mouse_genomes_project 18 35404589 35406755 - Hspa9 protein_coding retained_intron MGP_CBAJ_T0048873.1 MGP_CBAJ_G0023956.1 mouse_genomes_project 18 35414051 35419689 - Hspa9 protein_coding retained_intron MGP_CBAJ_T0049495.1 MGP_CBAJ_G0024211.1 mouse_genomes_project 18 69320616 69476934 - MGP_CBAJ_P0049495 Alpk2 protein_coding protein_coding MGP_CBAJ_T0049496.1 MGP_CBAJ_G0024211.1 mouse_genomes_project 18 69332902 69420624 - MGP_CBAJ_P0049496 Alpk2 protein_coding protein_coding MGP_CBAJ_T0049497.1 MGP_CBAJ_G0024211.1 mouse_genomes_project 18 69435798 69476935 - Alpk2 protein_coding processed_transcript MGP_CBAJ_T0006898.1 MGP_CBAJ_G0005668.1 mouse_genomes_project 18 1313616 1319928 - Gm26865 lincRNA lincRNA MGP_CBAJ_T0100282.1 MGP_CBAJ_G0038537.1 mouse_genomes_project 18 32860047 32860184 - Gm25826 snoRNA snoRNA MGP_CBAJ_T0100304.1 MGP_CBAJ_G0038559.1 mouse_genomes_project 18 94786486 94786620 - Gm24987 snoRNA snoRNA MGP_CBAJ_T0013135.1 MGP_CBAJ_G0011247.1 mouse_genomes_project 18 4675563 4675971 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0049684.1 MGP_CBAJ_G0024257.1 mouse_genomes_project 18 79251500 79251983 + MGP_CBAJ_P0049684 Gm9925 protein_coding protein_coding MGP_CBAJ_T0101069.1 MGP_CBAJ_G0039286.1 mouse_genomes_project 18 37829458 37831200 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101070.1 MGP_CBAJ_G0039286.1 mouse_genomes_project 18 37830963 37831906 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0049787.1 MGP_CBAJ_G0024295.1 mouse_genomes_project 18 86226875 86231604 + Gm16286 protein_coding processed_transcript MGP_CBAJ_T0049789.1 MGP_CBAJ_G0024295.1 mouse_genomes_project 18 86226908 86232843 + MGP_CBAJ_P0049789 Gm16286 protein_coding protein_coding MGP_CBAJ_T0049790.1 MGP_CBAJ_G0024295.1 mouse_genomes_project 18 86226940 86230878 + Gm16286 protein_coding retained_intron MGP_CBAJ_T0049791.1 MGP_CBAJ_G0024295.1 mouse_genomes_project 18 86226956 86227887 + Gm16286 protein_coding retained_intron MGP_CBAJ_T0049793.1 MGP_CBAJ_G0024295.1 mouse_genomes_project 18 86226977 86232834 + MGP_CBAJ_P0049793 Gm16286 protein_coding protein_coding MGP_CBAJ_T0049795.1 MGP_CBAJ_G0024295.1 mouse_genomes_project 18 86227005 86232852 + MGP_CBAJ_P0049795 Gm16286 protein_coding protein_coding MGP_CBAJ_T0049796.1 MGP_CBAJ_G0024295.1 mouse_genomes_project 18 86227023 86227795 + Gm16286 protein_coding retained_intron MGP_CBAJ_T0049797.1 MGP_CBAJ_G0024295.1 mouse_genomes_project 18 86227028 86227887 + Gm16286 protein_coding retained_intron MGP_CBAJ_T0049798.1 MGP_CBAJ_G0024295.1 mouse_genomes_project 18 86227370 86231598 + Gm16286 protein_coding processed_transcript MGP_CBAJ_T0049064.1 MGP_CBAJ_G0024048.1 mouse_genomes_project 18 38548900 38667940 + MGP_CBAJ_P0049064 Pcdhga9 protein_coding protein_coding MGP_CBAJ_T0049065.1 MGP_CBAJ_G0024048.1 mouse_genomes_project 18 38549339 38552377 + Pcdhga9 protein_coding retained_intron MGP_CBAJ_T0011323.1 MGP_CBAJ_G0009461.1 mouse_genomes_project 18 20344705 20344815 + Gm24372 misc_RNA misc_RNA MGP_CBAJ_T0017362.1 MGP_CBAJ_G0015102.1 mouse_genomes_project 18 38561665 38574292 - Gm26672 processed_transcript antisense MGP_CBAJ_T0017363.1 MGP_CBAJ_G0015102.1 mouse_genomes_project 18 38570432 38585577 - Gm26672 processed_transcript antisense MGP_CBAJ_T0017364.1 MGP_CBAJ_G0015102.1 mouse_genomes_project 18 38570585 38586278 - Gm26672 processed_transcript antisense MGP_CBAJ_T0017365.1 MGP_CBAJ_G0015102.1 mouse_genomes_project 18 38573154 38574686 - Gm26672 processed_transcript retained_intron MGP_CBAJ_T0099054.1 MGP_CBAJ_G0037309.1 mouse_genomes_project 18 88604543 88604673 - Gm25060 snRNA snRNA MGP_CBAJ_T0101071.1 MGP_CBAJ_G0039287.1 mouse_genomes_project 18 38442587 38443062 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101072.1 MGP_CBAJ_G0039287.1 mouse_genomes_project 18 38442907 38444327 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0048734.1 MGP_CBAJ_G0023900.1 mouse_genomes_project 18 23491281 23596297 + MGP_CBAJ_P0048734 Galnt1 protein_coding protein_coding MGP_CBAJ_T0048735.1 MGP_CBAJ_G0023900.1 mouse_genomes_project 18 23500105 23596289 + MGP_CBAJ_P0048735 Galnt1 protein_coding protein_coding MGP_CBAJ_T0048736.1 MGP_CBAJ_G0023900.1 mouse_genomes_project 18 23500178 23555804 + MGP_CBAJ_P0048736 Galnt1 protein_coding protein_coding MGP_CBAJ_T0048737.1 MGP_CBAJ_G0023900.1 mouse_genomes_project 18 23529179 23596289 + MGP_CBAJ_P0048737 Galnt1 protein_coding protein_coding MGP_CBAJ_T0048738.1 MGP_CBAJ_G0023900.1 mouse_genomes_project 18 23534925 23574433 + MGP_CBAJ_P0048738 Galnt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048739.1 MGP_CBAJ_G0023900.1 mouse_genomes_project 18 23545176 23578502 + MGP_CBAJ_P0048739 Galnt1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048740.1 MGP_CBAJ_G0023900.1 mouse_genomes_project 18 23586811 23592145 + Galnt1 protein_coding processed_transcript MGP_CBAJ_T0000969.1 MGP_CBAJ_G0000901.1 mouse_genomes_project 18 45553298 45553471 + TEC TEC MGP_CBAJ_T0049708.1 MGP_CBAJ_G0024267.1 mouse_genomes_project 18 80336857 80658218 + MGP_CBAJ_P0049708 Dym protein_coding protein_coding MGP_CBAJ_T0100293.1 MGP_CBAJ_G0038548.1 mouse_genomes_project 18 59081811 59081946 + Gm23555 snoRNA snoRNA MGP_CBAJ_T0049069.1 MGP_CBAJ_G0024052.1 mouse_genomes_project 18 38574068 38667943 + MGP_CBAJ_P0049069 Pcdhga11 protein_coding protein_coding MGP_CBAJ_T0013134.1 MGP_CBAJ_G0011246.1 mouse_genomes_project 18 3394924 3395233 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0097794.1 MGP_CBAJ_G0036067.1 mouse_genomes_project 18 96278373 96282147 - pseudogene pseudogene MGP_CBAJ_T0049290.1 MGP_CBAJ_G0024128.1 mouse_genomes_project 18 54236713 54237814 - MGP_CBAJ_P0049290 Gm4950 protein_coding protein_coding MGP_CBAJ_T0006932.1 MGP_CBAJ_G0005694.1 mouse_genomes_project 18 57701400 57800598 + Gm4221 lincRNA lincRNA MGP_CBAJ_T0006933.1 MGP_CBAJ_G0005694.1 mouse_genomes_project 18 57777732 57802675 + Gm4221 lincRNA lincRNA MGP_CBAJ_T0048828.1 MGP_CBAJ_G0023940.1 mouse_genomes_project 18 34714573 34745868 - MGP_CBAJ_P0048828 Reep5 protein_coding protein_coding MGP_CBAJ_T0049030.1 MGP_CBAJ_G0024021.1 mouse_genomes_project 18 38188746 38191597 + MGP_CBAJ_P0049030 Pcdhb10 protein_coding protein_coding MGP_CBAJ_T0048878.1 MGP_CBAJ_G0023961.1 mouse_genomes_project 18 36095106 36113995 + MGP_CBAJ_P0048878 Gm28285 protein_coding protein_coding MGP_CBAJ_T0048879.1 MGP_CBAJ_G0023961.1 mouse_genomes_project 18 36095110 36121149 + MGP_CBAJ_P0048879 Gm28285 protein_coding protein_coding MGP_CBAJ_T0048880.1 MGP_CBAJ_G0023961.1 mouse_genomes_project 18 36095114 36101181 + Gm28285 protein_coding processed_transcript MGP_CBAJ_T0048881.1 MGP_CBAJ_G0023961.1 mouse_genomes_project 18 36095114 36113695 + Gm28285 protein_coding processed_transcript MGP_CBAJ_T0048882.1 MGP_CBAJ_G0023961.1 mouse_genomes_project 18 36095115 36113918 + MGP_CBAJ_P0048882 Gm28285 protein_coding protein_coding MGP_CBAJ_T0048883.1 MGP_CBAJ_G0023961.1 mouse_genomes_project 18 36095124 36123819 + MGP_CBAJ_P0048883 Gm28285 protein_coding protein_coding MGP_CBAJ_T0048884.1 MGP_CBAJ_G0023961.1 mouse_genomes_project 18 36095140 36113665 + Gm28285 protein_coding processed_transcript MGP_CBAJ_T0048792.1 MGP_CBAJ_G0023928.1 mouse_genomes_project 18 32422197 32452006 + MGP_CBAJ_P0048792 Ercc3 protein_coding protein_coding MGP_CBAJ_T0048793.1 MGP_CBAJ_G0023928.1 mouse_genomes_project 18 32422251 32452006 + Ercc3 protein_coding retained_intron MGP_CBAJ_T0048794.1 MGP_CBAJ_G0023928.1 mouse_genomes_project 18 32439139 32451946 + Ercc3 protein_coding processed_transcript MGP_CBAJ_T0013179.1 MGP_CBAJ_G0011291.1 mouse_genomes_project 18 64280048 64280909 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006939.1 MGP_CBAJ_G0005698.1 mouse_genomes_project 18 66490706 66495000 - 2700046A07Rik lincRNA lincRNA MGP_CBAJ_T0006940.1 MGP_CBAJ_G0005698.1 mouse_genomes_project 18 66493474 66495032 - 2700046A07Rik lincRNA lincRNA MGP_CBAJ_T0049042.1 MGP_CBAJ_G0024033.1 mouse_genomes_project 18 38304704 38313835 + MGP_CBAJ_P0049042 Pcdhb22 protein_coding protein_coding MGP_CBAJ_T0049043.1 MGP_CBAJ_G0024033.1 mouse_genomes_project 18 38305192 38310556 + MGP_CBAJ_P0049043 Pcdhb22 protein_coding protein_coding MGP_CBAJ_T0003764.1 MGP_CBAJ_G0003375.1 mouse_genomes_project 18 87078907 87080027 + Gm27239 antisense antisense MGP_CBAJ_T0049751.1 MGP_CBAJ_G0024277.1 mouse_genomes_project 18 82792460 82793712 - MGP_CBAJ_P0049751 Gm7276 protein_coding protein_coding MGP_CBAJ_T0003724.1 MGP_CBAJ_G0003347.1 mouse_genomes_project 18 19528980 19603755 - Gm16090 antisense antisense MGP_CBAJ_T0048790.1 MGP_CBAJ_G0023926.1 mouse_genomes_project 18 32283835 32306543 - MGP_CBAJ_P0048790 Proc protein_coding protein_coding MGP_CBAJ_T0000973.1 MGP_CBAJ_G0000905.1 mouse_genomes_project 18 58085357 58085789 + TEC TEC MGP_CBAJ_T0048727.1 MGP_CBAJ_G0023897.1 mouse_genomes_project 18 23239449 23257651 + MGP_CBAJ_P0048727 Zfp35 protein_coding protein_coding MGP_CBAJ_T0013147.1 MGP_CBAJ_G0011259.1 mouse_genomes_project 18 15151961 15152602 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0048930.1 MGP_CBAJ_G0023973.1 mouse_genomes_project 18 36425616 36457416 + MGP_CBAJ_P0048930 Cxxc5 protein_coding protein_coding MGP_CBAJ_T0006912.1 MGP_CBAJ_G0005678.1 mouse_genomes_project 18 32009159 32011699 - Gm26823 lincRNA lincRNA MGP_CBAJ_T0097793.1 MGP_CBAJ_G0036066.1 mouse_genomes_project 18 83434122 83435354 + pseudogene pseudogene MGP_CBAJ_T0011337.1 MGP_CBAJ_G0009475.1 mouse_genomes_project 18 70996268 70996587 + Gm22219 misc_RNA misc_RNA MGP_CBAJ_T0049112.1 MGP_CBAJ_G0024061.1 mouse_genomes_project 18 38808059 38836355 - MGP_CBAJ_P0049112 Arap3 protein_coding protein_coding MGP_CBAJ_T0003740.1 MGP_CBAJ_G0003360.1 mouse_genomes_project 18 38652477 38653671 - Gm29994 antisense antisense MGP_CBAJ_T0048811.1 MGP_CBAJ_G0023936.1 mouse_genomes_project 18 33737914 33746219 + MGP_CBAJ_P0048811 Gm10549 protein_coding protein_coding MGP_CBAJ_T0049206.1 MGP_CBAJ_G0024097.1 mouse_genomes_project 18 45592626 45598386 - MGP_CBAJ_P0049206 Gm10267 protein_coding protein_coding MGP_CBAJ_T0049207.1 MGP_CBAJ_G0024097.1 mouse_genomes_project 18 45592635 45597828 - MGP_CBAJ_P0049207 Gm10267 protein_coding protein_coding MGP_CBAJ_T0010139.1 MGP_CBAJ_G0008277.1 mouse_genomes_project 18 64635097 64635161 + Mir6983 miRNA miRNA MGP_CBAJ_T0003721.1 MGP_CBAJ_G0003344.1 mouse_genomes_project 18 9964609 9969504 + Gm15956 antisense antisense MGP_CBAJ_T0099029.1 MGP_CBAJ_G0037284.1 mouse_genomes_project 18 33279436 33279540 - Gm22814 snRNA snRNA MGP_CBAJ_T0011327.1 MGP_CBAJ_G0009465.1 mouse_genomes_project 18 37531033 37531176 + Vaultrc5 misc_RNA misc_RNA MGP_CBAJ_T0099034.1 MGP_CBAJ_G0037289.1 mouse_genomes_project 18 48130572 48130666 - Gm24076 snRNA snRNA MGP_CBAJ_T0006934.1 MGP_CBAJ_G0005695.1 mouse_genomes_project 18 61415468 61429769 + Gm26507 lincRNA lincRNA MGP_CBAJ_T0048947.1 MGP_CBAJ_G0023978.1 mouse_genomes_project 18 37095151 37151706 - MGP_CBAJ_P0048947 Pfdn1 protein_coding protein_coding MGP_CBAJ_T0048927.1 MGP_CBAJ_G0023971.1 mouse_genomes_project 18 36312669 36319546 - MGP_CBAJ_P0048927 Tmem173 protein_coding protein_coding MGP_CBAJ_T0010142.1 MGP_CBAJ_G0008280.1 mouse_genomes_project 18 65267568 65267638 - Mir145a miRNA miRNA MGP_CBAJ_T0049209.1 MGP_CBAJ_G0024099.1 mouse_genomes_project 18 45626471 45642258 - MGP_CBAJ_P0049209 Spink11 protein_coding protein_coding MGP_CBAJ_T0049210.1 MGP_CBAJ_G0024099.1 mouse_genomes_project 18 45626881 45636335 - Spink11 protein_coding retained_intron MGP_CBAJ_T0048698.1 MGP_CBAJ_G0023889.1 mouse_genomes_project 18 20612913 20737296 - MGP_CBAJ_P0048698 Klhl14 protein_coding protein_coding MGP_CBAJ_T0048699.1 MGP_CBAJ_G0023889.1 mouse_genomes_project 18 20612915 20739681 - MGP_CBAJ_P0048699 Klhl14 protein_coding protein_coding MGP_CBAJ_T0017377.1 MGP_CBAJ_G0015107.1 mouse_genomes_project 18 60462827 60666107 - 4930511M06Rik processed_transcript processed_transcript MGP_CBAJ_T0017380.1 MGP_CBAJ_G0015107.1 mouse_genomes_project 18 60618349 60664098 - 4930511M06Rik processed_transcript processed_transcript MGP_CBAJ_T0017384.1 MGP_CBAJ_G0015107.1 mouse_genomes_project 18 60657748 60664201 - 4930511M06Rik processed_transcript processed_transcript MGP_CBAJ_T0017385.1 MGP_CBAJ_G0015107.1 mouse_genomes_project 18 60658402 60666301 - 4930511M06Rik processed_transcript processed_transcript MGP_CBAJ_T0017386.1 MGP_CBAJ_G0015107.1 mouse_genomes_project 18 60660083 60666303 - 4930511M06Rik processed_transcript processed_transcript MGP_CBAJ_T0013142.1 MGP_CBAJ_G0011254.1 mouse_genomes_project 18 10147225 10147656 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0100276.1 MGP_CBAJ_G0038531.1 mouse_genomes_project 18 15368489 15368619 + Gm22470 snoRNA snoRNA MGP_CBAJ_T0049394.1 MGP_CBAJ_G0024172.1 mouse_genomes_project 18 64303103 64312567 + MGP_CBAJ_P0049394 Cd74 protein_coding protein_coding MGP_CBAJ_T0049395.1 MGP_CBAJ_G0024172.1 mouse_genomes_project 18 64303103 64312567 + MGP_CBAJ_P0049395 Cd74 protein_coding protein_coding MGP_CBAJ_T0049396.1 MGP_CBAJ_G0024172.1 mouse_genomes_project 18 64303111 64312567 + MGP_CBAJ_P0049396 Cd74 protein_coding protein_coding MGP_CBAJ_T0100285.1 MGP_CBAJ_G0038540.1 mouse_genomes_project 18 35407126 35407193 - Gm22200 snoRNA snoRNA MGP_CBAJ_T0049018.1 MGP_CBAJ_G0024012.1 mouse_genomes_project 18 38041489 38044077 + MGP_CBAJ_P0049018 Pcdhb1 protein_coding protein_coding MGP_CBAJ_T0003749.1 MGP_CBAJ_G0003367.1 mouse_genomes_project 18 59760875 59796035 + Gm15345 antisense antisense MGP_CBAJ_T0049544.1 MGP_CBAJ_G0024223.1 mouse_genomes_project 18 71499470 71661418 + MGP_CBAJ_P0049544 Gnal protein_coding protein_coding MGP_CBAJ_T0049545.1 MGP_CBAJ_G0024223.1 mouse_genomes_project 18 71560910 71661418 + MGP_CBAJ_P0049545 Gnal protein_coding protein_coding MGP_CBAJ_T0049249.1 MGP_CBAJ_G0024118.1 mouse_genomes_project 18 48693840 48847632 + MGP_CBAJ_P0049249 Commd10 protein_coding protein_coding MGP_CBAJ_T0013172.1 MGP_CBAJ_G0011284.1 mouse_genomes_project 18 54882215 54883113 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0048839.1 MGP_CBAJ_G0023946.1 mouse_genomes_project 18 35012631 35043748 - MGP_CBAJ_P0048839 Brd8 protein_coding unknown_likely_coding MGP_CBAJ_T0048840.1 MGP_CBAJ_G0023946.1 mouse_genomes_project 18 35012637 35043762 - MGP_CBAJ_P0048840 Brd8 protein_coding protein_coding MGP_CBAJ_T0048841.1 MGP_CBAJ_G0023946.1 mouse_genomes_project 18 35012637 35043762 - MGP_CBAJ_P0048841 Brd8 protein_coding protein_coding MGP_CBAJ_T0048842.1 MGP_CBAJ_G0023946.1 mouse_genomes_project 18 35013637 35043714 - Brd8 protein_coding retained_intron MGP_CBAJ_T0048843.1 MGP_CBAJ_G0023946.1 mouse_genomes_project 18 35013666 35043762 - MGP_CBAJ_P0048843 Brd8 protein_coding protein_coding MGP_CBAJ_T0048844.1 MGP_CBAJ_G0023946.1 mouse_genomes_project 18 35014982 35043762 - MGP_CBAJ_P0048844 Brd8 protein_coding protein_coding MGP_CBAJ_T0048845.1 MGP_CBAJ_G0023946.1 mouse_genomes_project 18 35024806 35043762 - Brd8 protein_coding retained_intron MGP_CBAJ_T0048846.1 MGP_CBAJ_G0023946.1 mouse_genomes_project 18 35025788 35043715 - Brd8 protein_coding processed_transcript MGP_CBAJ_T0048847.1 MGP_CBAJ_G0023946.1 mouse_genomes_project 18 35041078 35043762 - Brd8 protein_coding retained_intron MGP_CBAJ_T0049168.1 MGP_CBAJ_G0024077.1 mouse_genomes_project 18 43301475 43314263 - MGP_CBAJ_P0049168 Grxcr2 protein_coding protein_coding MGP_CBAJ_T0048885.1 MGP_CBAJ_G0023962.1 mouse_genomes_project 18 36103848 36114200 + MGP_CBAJ_P0048885 Matr3 protein_coding protein_coding MGP_CBAJ_T0048886.1 MGP_CBAJ_G0023962.1 mouse_genomes_project 18 36103860 36139185 + MGP_CBAJ_P0048886 Matr3 protein_coding protein_coding MGP_CBAJ_T0048887.1 MGP_CBAJ_G0023962.1 mouse_genomes_project 18 36103894 36113833 + MGP_CBAJ_P0048887 Matr3 protein_coding protein_coding MGP_CBAJ_T0048888.1 MGP_CBAJ_G0023962.1 mouse_genomes_project 18 36103913 36133811 + MGP_CBAJ_P0048888 Matr3 protein_coding protein_coding MGP_CBAJ_T0048889.1 MGP_CBAJ_G0023962.1 mouse_genomes_project 18 36103919 36133834 + MGP_CBAJ_P0048889 Matr3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048890.1 MGP_CBAJ_G0023962.1 mouse_genomes_project 18 36103921 36133794 + MGP_CBAJ_P0048890 Matr3 protein_coding protein_coding MGP_CBAJ_T0048891.1 MGP_CBAJ_G0023962.1 mouse_genomes_project 18 36104001 36133742 + MGP_CBAJ_P0048891 Matr3 protein_coding protein_coding MGP_CBAJ_T0048892.1 MGP_CBAJ_G0023962.1 mouse_genomes_project 18 36104147 36133951 + MGP_CBAJ_P0048892 Matr3 protein_coding protein_coding MGP_CBAJ_T0048893.1 MGP_CBAJ_G0023962.1 mouse_genomes_project 18 36104155 36133677 + MGP_CBAJ_P0048893 Matr3 protein_coding protein_coding MGP_CBAJ_T0048894.1 MGP_CBAJ_G0023962.1 mouse_genomes_project 18 36104189 36121218 + MGP_CBAJ_P0048894 Matr3 protein_coding protein_coding MGP_CBAJ_T0048895.1 MGP_CBAJ_G0023962.1 mouse_genomes_project 18 36104385 36113913 + MGP_CBAJ_P0048895 Matr3 protein_coding protein_coding MGP_CBAJ_T0048896.1 MGP_CBAJ_G0023962.1 mouse_genomes_project 18 36104391 36121503 + MGP_CBAJ_P0048896 Matr3 protein_coding protein_coding MGP_CBAJ_T0048897.1 MGP_CBAJ_G0023962.1 mouse_genomes_project 18 36113641 36115917 + Matr3 protein_coding retained_intron MGP_CBAJ_T0048898.1 MGP_CBAJ_G0023962.1 mouse_genomes_project 18 36113865 36133643 + MGP_CBAJ_P0048898 Matr3 protein_coding protein_coding MGP_CBAJ_T0048899.1 MGP_CBAJ_G0023962.1 mouse_genomes_project 18 36120110 36121486 + Matr3 protein_coding retained_intron MGP_CBAJ_T0048900.1 MGP_CBAJ_G0023962.1 mouse_genomes_project 18 36121236 36122936 + Matr3 protein_coding retained_intron MGP_CBAJ_T0011318.1 MGP_CBAJ_G0009456.1 mouse_genomes_project 18 10836958 10837265 + Gm26407 misc_RNA misc_RNA MGP_CBAJ_T0049246.1 MGP_CBAJ_G0024116.1 mouse_genomes_project 18 48443814 48491425 + MGP_CBAJ_P0049246 Ap3s1 protein_coding unknown_likely_coding MGP_CBAJ_T0049481.1 MGP_CBAJ_G0024203.1 mouse_genomes_project 18 67503272 67538680 - MGP_CBAJ_P0049481 Txnl1 protein_coding protein_coding MGP_CBAJ_T0049200.1 MGP_CBAJ_G0024092.1 mouse_genomes_project 18 45216448 45235794 - MGP_CBAJ_P0049200 Gm94 protein_coding protein_coding MGP_CBAJ_T0049124.1 MGP_CBAJ_G0024066.1 mouse_genomes_project 18 39205859 39217293 - MGP_CBAJ_P0049124 Gnpda1 protein_coding protein_coding MGP_CBAJ_T0049125.1 MGP_CBAJ_G0024066.1 mouse_genomes_project 18 39206994 39210360 - Gnpda1 protein_coding processed_transcript MGP_CBAJ_T0049126.1 MGP_CBAJ_G0024066.1 mouse_genomes_project 18 39211386 39213368 - Gnpda1 protein_coding retained_intron MGP_CBAJ_T0049127.1 MGP_CBAJ_G0024066.1 mouse_genomes_project 18 39211478 39217199 - MGP_CBAJ_P0049127 Gnpda1 protein_coding protein_coding MGP_CBAJ_T0013175.1 MGP_CBAJ_G0011287.1 mouse_genomes_project 18 58537989 58538967 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0048555.1 MGP_CBAJ_G0023834.1 mouse_genomes_project 18 3962165 3993177 - Mkx protein_coding processed_transcript MGP_CBAJ_T0048556.1 MGP_CBAJ_G0023834.1 mouse_genomes_project 18 3991524 4071203 - MGP_CBAJ_P0048556 Mkx protein_coding protein_coding MGP_CBAJ_T0048557.1 MGP_CBAJ_G0023834.1 mouse_genomes_project 18 3993507 4057314 - Mkx protein_coding retained_intron MGP_CBAJ_T0048558.1 MGP_CBAJ_G0023834.1 mouse_genomes_project 18 4064971 4070205 - Mkx protein_coding processed_transcript MGP_CBAJ_T0048559.1 MGP_CBAJ_G0023834.1 mouse_genomes_project 18 4066638 4071149 - Mkx protein_coding retained_intron MGP_CBAJ_T0049164.1 MGP_CBAJ_G0024073.1 mouse_genomes_project 18 41315015 41329558 - MGP_CBAJ_P0049164 Yipf5 protein_coding protein_coding MGP_CBAJ_T0048964.1 MGP_CBAJ_G0023983.1 mouse_genomes_project 18 37380139 37384667 - MGP_CBAJ_P0048964 Sra1 protein_coding protein_coding MGP_CBAJ_T0048965.1 MGP_CBAJ_G0023983.1 mouse_genomes_project 18 37380704 37383751 - MGP_CBAJ_P0048965 Sra1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048966.1 MGP_CBAJ_G0023983.1 mouse_genomes_project 18 37380730 37383771 - Sra1 protein_coding retained_intron MGP_CBAJ_T0048967.1 MGP_CBAJ_G0023983.1 mouse_genomes_project 18 37380887 37383750 - MGP_CBAJ_P0048967 Sra1 protein_coding protein_coding MGP_CBAJ_T0048968.1 MGP_CBAJ_G0023983.1 mouse_genomes_project 18 37383286 37383741 - Sra1 protein_coding retained_intron MGP_CBAJ_T0048969.1 MGP_CBAJ_G0023983.1 mouse_genomes_project 18 37384630 37392580 - MGP_CBAJ_P0048969 Sra1 protein_coding protein_coding MGP_CBAJ_T0049663.1 MGP_CBAJ_G0024250.1 mouse_genomes_project 18 76136784 77395879 - MGP_CBAJ_P0049663 Dcc protein_coding protein_coding MGP_CBAJ_T0049664.1 MGP_CBAJ_G0024250.1 mouse_genomes_project 18 76137036 77395827 - MGP_CBAJ_P0049664 Dcc protein_coding protein_coding MGP_CBAJ_T0049665.1 MGP_CBAJ_G0024250.1 mouse_genomes_project 18 76942920 77395851 - Dcc protein_coding retained_intron MGP_CBAJ_T0049291.1 MGP_CBAJ_G0024129.1 mouse_genomes_project 18 54739977 54741428 + MGP_CBAJ_P0049291 Ftmt protein_coding protein_coding MGP_CBAJ_T0010115.1 MGP_CBAJ_G0008253.1 mouse_genomes_project 18 8243385 8243507 + Mir1b miRNA miRNA MGP_CBAJ_T0100301.1 MGP_CBAJ_G0038556.1 mouse_genomes_project 18 83389311 83389443 + Gm26014 snoRNA snoRNA MGP_CBAJ_T0049658.1 MGP_CBAJ_G0024249.1 mouse_genomes_project 18 75368725 75432817 + MGP_CBAJ_P0049658 Mbd2 protein_coding protein_coding MGP_CBAJ_T0049659.1 MGP_CBAJ_G0024249.1 mouse_genomes_project 18 75368870 75387737 + MGP_CBAJ_P0049659 Mbd2 protein_coding protein_coding MGP_CBAJ_T0049660.1 MGP_CBAJ_G0024249.1 mouse_genomes_project 18 75385617 75429484 + MGP_CBAJ_P0049660 Mbd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049661.1 MGP_CBAJ_G0024249.1 mouse_genomes_project 18 75398065 75424001 + Mbd2 protein_coding retained_intron MGP_CBAJ_T0049662.1 MGP_CBAJ_G0024249.1 mouse_genomes_project 18 75424540 75432463 + Mbd2 protein_coding retained_intron MGP_CBAJ_T0049167.1 MGP_CBAJ_G0024076.1 mouse_genomes_project 18 43178425 43273064 - MGP_CBAJ_P0049167 Prelid2 protein_coding protein_coding MGP_CBAJ_T0003747.1 MGP_CBAJ_G0003366.1 mouse_genomes_project 18 47245141 47498980 - antisense antisense MGP_CBAJ_T0003748.1 MGP_CBAJ_G0003366.1 mouse_genomes_project 18 47246784 47439506 - antisense antisense MGP_CBAJ_T0049343.1 MGP_CBAJ_G0024151.1 mouse_genomes_project 18 60440900 60487606 + MGP_CBAJ_P0049343 Prrc1 protein_coding protein_coding MGP_CBAJ_T0049498.1 MGP_CBAJ_G0024212.1 mouse_genomes_project 18 69515139 69567768 + MGP_CBAJ_P0049498 Malt1 protein_coding protein_coding MGP_CBAJ_T0049499.1 MGP_CBAJ_G0024212.1 mouse_genomes_project 18 69515348 69542651 + MGP_CBAJ_P0049499 Malt1 protein_coding unknown_likely_coding MGP_CBAJ_T0049500.1 MGP_CBAJ_G0024212.1 mouse_genomes_project 18 69545434 69565387 + MGP_CBAJ_P0049500 Malt1 protein_coding unknown_likely_coding MGP_CBAJ_T0011321.1 MGP_CBAJ_G0009459.1 mouse_genomes_project 18 15485669 15485901 - Gm24015 misc_RNA misc_RNA MGP_CBAJ_T0097997.1 MGP_CBAJ_G0036270.1 mouse_genomes_project 18 39234594 39234691 + Gm24690 rRNA rRNA MGP_CBAJ_T0048775.1 MGP_CBAJ_G0023915.1 mouse_genomes_project 18 31737437 31738677 + MGP_CBAJ_P0048775 B930094E09Rik protein_coding protein_coding MGP_CBAJ_T0049404.1 MGP_CBAJ_G0024175.1 mouse_genomes_project 18 64439348 64501267 + MGP_CBAJ_P0049404 Camk2a protein_coding protein_coding MGP_CBAJ_T0049405.1 MGP_CBAJ_G0024175.1 mouse_genomes_project 18 64439362 64456927 + Camk2a protein_coding retained_intron MGP_CBAJ_T0049406.1 MGP_CBAJ_G0024175.1 mouse_genomes_project 18 64439362 64499523 + MGP_CBAJ_P0049406 Camk2a protein_coding protein_coding MGP_CBAJ_T0049407.1 MGP_CBAJ_G0024175.1 mouse_genomes_project 18 64439455 64456945 + MGP_CBAJ_P0049407 Camk2a protein_coding protein_coding MGP_CBAJ_T0049408.1 MGP_CBAJ_G0024175.1 mouse_genomes_project 18 64440675 64469251 + MGP_CBAJ_P0049408 Camk2a protein_coding protein_coding MGP_CBAJ_T0049409.1 MGP_CBAJ_G0024175.1 mouse_genomes_project 18 64477012 64497987 + MGP_CBAJ_P0049409 Camk2a protein_coding protein_coding MGP_CBAJ_T0049410.1 MGP_CBAJ_G0024175.1 mouse_genomes_project 18 64477058 64498821 + MGP_CBAJ_P0049410 Camk2a protein_coding protein_coding MGP_CBAJ_T0048562.1 MGP_CBAJ_G0023836.1 mouse_genomes_project 18 4413425 4730386 - MGP_CBAJ_P0048562 Mpp7 protein_coding protein_coding MGP_CBAJ_T0048563.1 MGP_CBAJ_G0023836.1 mouse_genomes_project 18 4416237 4655884 - MGP_CBAJ_P0048563 Mpp7 protein_coding unknown_likely_coding MGP_CBAJ_T0048688.1 MGP_CBAJ_G0023882.1 mouse_genomes_project 18 19621080 19621452 - MGP_CBAJ_P0048688 Gm10269 protein_coding protein_coding MGP_CBAJ_T0048937.1 MGP_CBAJ_G0023975.1 mouse_genomes_project 18 36638899 36845569 - MGP_CBAJ_P0048937 Nrg2 protein_coding protein_coding MGP_CBAJ_T0048938.1 MGP_CBAJ_G0023975.1 mouse_genomes_project 18 36638899 36845569 - MGP_CBAJ_P0048938 Nrg2 protein_coding protein_coding MGP_CBAJ_T0048939.1 MGP_CBAJ_G0023975.1 mouse_genomes_project 18 36639106 36681530 - MGP_CBAJ_P0048939 Nrg2 protein_coding unknown_likely_coding MGP_CBAJ_T0048940.1 MGP_CBAJ_G0023975.1 mouse_genomes_project 18 36648589 36845421 - MGP_CBAJ_P0048940 Nrg2 protein_coding protein_coding MGP_CBAJ_T0049054.1 MGP_CBAJ_G0024041.1 mouse_genomes_project 18 38490101 38667943 + MGP_CBAJ_P0049054 Pcdhgb2 protein_coding protein_coding MGP_CBAJ_T0010109.1 MGP_CBAJ_G0008247.1 mouse_genomes_project 18 2622739 2622838 + Gm22709 miRNA miRNA MGP_CBAJ_T0049517.1 MGP_CBAJ_G0024214.1 mouse_genomes_project 18 69845445 69904365 + MGP_CBAJ_P0049517 Oacyl protein_coding protein_coding MGP_CBAJ_T0049518.1 MGP_CBAJ_G0024214.1 mouse_genomes_project 18 69845447 69904429 + MGP_CBAJ_P0049518 Oacyl protein_coding protein_coding MGP_CBAJ_T0049519.1 MGP_CBAJ_G0024214.1 mouse_genomes_project 18 69901843 69903216 + Oacyl protein_coding processed_transcript MGP_CBAJ_T0100291.1 MGP_CBAJ_G0038546.1 mouse_genomes_project 18 48731048 48731193 - Gm22791 snoRNA snoRNA MGP_CBAJ_T0048779.1 MGP_CBAJ_G0023918.1 mouse_genomes_project 18 31929286 31939597 + MGP_CBAJ_P0048779 Polr2d protein_coding protein_coding MGP_CBAJ_T0048694.1 MGP_CBAJ_G0023886.1 mouse_genomes_project 18 19998297 20028907 + MGP_CBAJ_P0048694 Rnf138 protein_coding protein_coding MGP_CBAJ_T0048695.1 MGP_CBAJ_G0023886.1 mouse_genomes_project 18 19998297 20028907 + MGP_CBAJ_P0048695 Rnf138 protein_coding protein_coding MGP_CBAJ_T0010134.1 MGP_CBAJ_G0008272.1 mouse_genomes_project 18 63001647 63001753 + Mir6355 miRNA miRNA MGP_CBAJ_T0049037.1 MGP_CBAJ_G0024028.1 mouse_genomes_project 18 38267317 38271978 + MGP_CBAJ_P0049037 Pcdhb17 protein_coding protein_coding MGP_CBAJ_T0049315.1 MGP_CBAJ_G0024142.1 mouse_genomes_project 18 57582859 57701291 - MGP_CBAJ_P0049315 Zfp608 protein_coding protein_coding MGP_CBAJ_T0048862.1 MGP_CBAJ_G0023951.1 mouse_genomes_project 18 35191663 35206520 + MGP_CBAJ_P0048862 Fam53c protein_coding protein_coding MGP_CBAJ_T0048863.1 MGP_CBAJ_G0023951.1 mouse_genomes_project 18 35192313 35206498 + MGP_CBAJ_P0048863 Fam53c protein_coding protein_coding MGP_CBAJ_T0099051.1 MGP_CBAJ_G0037306.1 mouse_genomes_project 18 84337052 84337159 + Gm26430 snRNA snRNA MGP_CBAJ_T0049309.1 MGP_CBAJ_G0024138.1 mouse_genomes_project 18 55944371 55958255 - MGP_CBAJ_P0049309 Ppic protein_coding protein_coding MGP_CBAJ_T0048492.1 MGP_CBAJ_G0023822.1 mouse_genomes_project 18 1089382 1110515 + MGP_CBAJ_P0048492 Lyzl1 protein_coding protein_coding MGP_CBAJ_T0048493.1 MGP_CBAJ_G0023822.1 mouse_genomes_project 18 1089412 1110515 + MGP_CBAJ_P0048493 Lyzl1 protein_coding protein_coding MGP_CBAJ_T0049052.1 MGP_CBAJ_G0024040.1 mouse_genomes_project 18 38485470 38667943 + MGP_CBAJ_P0049052 Pcdhga4 protein_coding protein_coding MGP_CBAJ_T0049053.1 MGP_CBAJ_G0024040.1 mouse_genomes_project 18 38487144 38488040 + MGP_CBAJ_P0049053 Pcdhga4 protein_coding protein_coding MGP_CBAJ_T0049425.1 MGP_CBAJ_G0024183.1 mouse_genomes_project 18 64845649 64965860 - MGP_CBAJ_P0049425 Ppargc1b protein_coding protein_coding MGP_CBAJ_T0049426.1 MGP_CBAJ_G0024183.1 mouse_genomes_project 18 64846022 64965829 - MGP_CBAJ_P0049426 Ppargc1b protein_coding protein_coding MGP_CBAJ_T0049427.1 MGP_CBAJ_G0024183.1 mouse_genomes_project 18 64955261 64965829 - Ppargc1b protein_coding processed_transcript MGP_CBAJ_T0101764.1 MGP_CBAJ_G0039795.1 mouse_genomes_project 18 37773944 37774731 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0048837.1 MGP_CBAJ_G0023945.1 mouse_genomes_project 18 34993904 35011487 - MGP_CBAJ_P0048837 4933408B17Rik protein_coding protein_coding MGP_CBAJ_T0048838.1 MGP_CBAJ_G0023945.1 mouse_genomes_project 18 34994003 35011364 - MGP_CBAJ_P0048838 4933408B17Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0100280.1 MGP_CBAJ_G0038535.1 mouse_genomes_project 18 30469117 30469229 + Gm22870 snoRNA snoRNA MGP_CBAJ_T0048951.1 MGP_CBAJ_G0023981.1 mouse_genomes_project 18 37263554 37291600 + MGP_CBAJ_P0048951 Ankhd1 protein_coding protein_coding MGP_CBAJ_T0048952.1 MGP_CBAJ_G0023981.1 mouse_genomes_project 18 37264178 37372370 + MGP_CBAJ_P0048952 Ankhd1 protein_coding protein_coding MGP_CBAJ_T0048953.1 MGP_CBAJ_G0023981.1 mouse_genomes_project 18 37289014 37292128 + Ankhd1 protein_coding retained_intron MGP_CBAJ_T0048954.1 MGP_CBAJ_G0023981.1 mouse_genomes_project 18 37312959 37337163 + MGP_CBAJ_P0048954 Ankhd1 protein_coding protein_coding MGP_CBAJ_T0048955.1 MGP_CBAJ_G0023981.1 mouse_genomes_project 18 37318381 37345962 + Ankhd1 protein_coding processed_transcript MGP_CBAJ_T0048956.1 MGP_CBAJ_G0023981.1 mouse_genomes_project 18 37326058 37345950 + MGP_CBAJ_P0048956 Ankhd1 protein_coding protein_coding MGP_CBAJ_T0048957.1 MGP_CBAJ_G0023981.1 mouse_genomes_project 18 37326461 37336753 + Ankhd1 protein_coding retained_intron MGP_CBAJ_T0048958.1 MGP_CBAJ_G0023981.1 mouse_genomes_project 18 37349881 37354519 + MGP_CBAJ_P0048958 Ankhd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048959.1 MGP_CBAJ_G0023981.1 mouse_genomes_project 18 37350108 37354525 + MGP_CBAJ_P0048959 Ankhd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048960.1 MGP_CBAJ_G0023981.1 mouse_genomes_project 18 37352904 37355800 + Ankhd1 protein_coding retained_intron MGP_CBAJ_T0048961.1 MGP_CBAJ_G0023981.1 mouse_genomes_project 18 37359315 37379376 + MGP_CBAJ_P0048961 Ankhd1 protein_coding protein_coding MGP_CBAJ_T0048962.1 MGP_CBAJ_G0023981.1 mouse_genomes_project 18 37368969 37372271 + MGP_CBAJ_P0048962 Ankhd1 protein_coding protein_coding MGP_CBAJ_T0049296.1 MGP_CBAJ_G0024133.1 mouse_genomes_project 18 55093443 55112567 + MGP_CBAJ_P0049296 1700034E13Rik protein_coding protein_coding MGP_CBAJ_T0049297.1 MGP_CBAJ_G0024133.1 mouse_genomes_project 18 55093450 55112567 + MGP_CBAJ_P0049297 1700034E13Rik protein_coding protein_coding MGP_CBAJ_T0048875.1 MGP_CBAJ_G0023958.1 mouse_genomes_project 18 35711907 35717921 - MGP_CBAJ_P0048875 Lrrtm2 protein_coding protein_coding MGP_CBAJ_T0011332.1 MGP_CBAJ_G0009470.1 mouse_genomes_project 18 43959648 43959804 + Gm27457 misc_RNA misc_RNA MGP_CBAJ_T0099047.1 MGP_CBAJ_G0037302.1 mouse_genomes_project 18 68707628 68707690 + Gm23016 snRNA snRNA MGP_CBAJ_T0006945.1 MGP_CBAJ_G0005703.1 mouse_genomes_project 18 80923913 80932086 + Gm10532 lincRNA lincRNA MGP_CBAJ_T0013156.1 MGP_CBAJ_G0011268.1 mouse_genomes_project 18 36354053 36354404 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0048753.1 MGP_CBAJ_G0023909.1 mouse_genomes_project 18 24556038 24877900 + MGP_CBAJ_P0048753 AW554918 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048754.1 MGP_CBAJ_G0023909.1 mouse_genomes_project 18 24556049 24881491 + MGP_CBAJ_P0048754 AW554918 protein_coding protein_coding MGP_CBAJ_T0048755.1 MGP_CBAJ_G0023909.1 mouse_genomes_project 18 24556053 24587353 + AW554918 protein_coding processed_transcript MGP_CBAJ_T0048756.1 MGP_CBAJ_G0023909.1 mouse_genomes_project 18 24556059 24694679 + AW554918 protein_coding processed_transcript MGP_CBAJ_T0048757.1 MGP_CBAJ_G0023909.1 mouse_genomes_project 18 24556059 24881496 + MGP_CBAJ_P0048757 AW554918 protein_coding protein_coding MGP_CBAJ_T0048758.1 MGP_CBAJ_G0023909.1 mouse_genomes_project 18 24556059 24881496 + MGP_CBAJ_P0048758 AW554918 protein_coding protein_coding MGP_CBAJ_T0048759.1 MGP_CBAJ_G0023909.1 mouse_genomes_project 18 24556062 24878071 + MGP_CBAJ_P0048759 AW554918 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048760.1 MGP_CBAJ_G0023909.1 mouse_genomes_project 18 24634283 24878267 + MGP_CBAJ_P0048760 AW554918 protein_coding protein_coding MGP_CBAJ_T0099030.1 MGP_CBAJ_G0037285.1 mouse_genomes_project 18 34340022 34340083 - Gm22788 snRNA snRNA MGP_CBAJ_T0049848.1 MGP_CBAJ_G0024309.1 mouse_genomes_project 18 90479926 90489331 + MGP_CBAJ_P0049848 Zadh2 protein_coding protein_coding MGP_CBAJ_T0048750.1 MGP_CBAJ_G0023907.1 mouse_genomes_project 18 24027503 24512913 + MGP_CBAJ_P0048750 Fhod3 protein_coding protein_coding MGP_CBAJ_T0049447.1 MGP_CBAJ_G0024190.1 mouse_genomes_project 18 65442281 65567702 - MGP_CBAJ_P0049447 Ablim3 protein_coding protein_coding MGP_CBAJ_T0049448.1 MGP_CBAJ_G0024190.1 mouse_genomes_project 18 65442281 65567730 - MGP_CBAJ_P0049448 Ablim3 protein_coding protein_coding MGP_CBAJ_T0049542.1 MGP_CBAJ_G0024221.1 mouse_genomes_project 18 70765153 70772100 + MGP_CBAJ_P0049542 Pmaip1 protein_coding protein_coding MGP_CBAJ_T0048485.1 MGP_CBAJ_G0023820.1 mouse_genomes_project 18 211384 276504 + MGP_CBAJ_P0048485 Cul2 protein_coding protein_coding MGP_CBAJ_T0048486.1 MGP_CBAJ_G0023820.1 mouse_genomes_project 18 211621 275515 + MGP_CBAJ_P0048486 Cul2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048487.1 MGP_CBAJ_G0023820.1 mouse_genomes_project 18 211628 276507 + MGP_CBAJ_P0048487 Cul2 protein_coding protein_coding MGP_CBAJ_T0048488.1 MGP_CBAJ_G0023820.1 mouse_genomes_project 18 211653 271661 + MGP_CBAJ_P0048488 Cul2 protein_coding protein_coding MGP_CBAJ_T0048489.1 MGP_CBAJ_G0023820.1 mouse_genomes_project 18 264595 267394 + Cul2 protein_coding processed_transcript MGP_CBAJ_T0048490.1 MGP_CBAJ_G0023820.1 mouse_genomes_project 18 274013 275143 + Cul2 protein_coding processed_transcript MGP_CBAJ_T0049010.1 MGP_CBAJ_G0024008.1 mouse_genomes_project 18 37769038 37774131 + Pcdha11 protein_coding retained_intron MGP_CBAJ_T0049011.1 MGP_CBAJ_G0024008.1 mouse_genomes_project 18 37769040 37918914 + Pcdha11 protein_coding retained_intron MGP_CBAJ_T0049012.1 MGP_CBAJ_G0024008.1 mouse_genomes_project 18 37769078 37945878 + MGP_CBAJ_P0049012 Pcdha11 protein_coding protein_coding MGP_CBAJ_T0049013.1 MGP_CBAJ_G0024008.1 mouse_genomes_project 18 37769158 37945609 + MGP_CBAJ_P0049013 Pcdha11 protein_coding protein_coding MGP_CBAJ_T0049014.1 MGP_CBAJ_G0024008.1 mouse_genomes_project 18 37772348 37943436 + MGP_CBAJ_P0049014 Pcdha11 protein_coding protein_coding MGP_CBAJ_T0049236.1 MGP_CBAJ_G0024109.1 mouse_genomes_project 18 47904422 47934564 - MGP_CBAJ_P0049236 Ccdc112 protein_coding protein_coding MGP_CBAJ_T0048631.1 MGP_CBAJ_G0023859.1 mouse_genomes_project 18 10027101 10084259 - MGP_CBAJ_P0048631 Ankrd29 protein_coding protein_coding MGP_CBAJ_T0048632.1 MGP_CBAJ_G0023859.1 mouse_genomes_project 18 10027104 10048723 - Ankrd29 protein_coding processed_transcript MGP_CBAJ_T0048633.1 MGP_CBAJ_G0023859.1 mouse_genomes_project 18 10029344 10084186 - MGP_CBAJ_P0048633 Ankrd29 protein_coding protein_coding MGP_CBAJ_T0048634.1 MGP_CBAJ_G0023859.1 mouse_genomes_project 18 10052789 10084268 - MGP_CBAJ_P0048634 Ankrd29 protein_coding protein_coding MGP_CBAJ_T0100298.1 MGP_CBAJ_G0038553.1 mouse_genomes_project 18 80317414 80317480 + Snord58b snoRNA snoRNA MGP_CBAJ_T0049767.1 MGP_CBAJ_G0024282.1 mouse_genomes_project 18 83492871 83503023 - MGP_CBAJ_P0049767 Haus1 protein_coding protein_coding MGP_CBAJ_T0049056.1 MGP_CBAJ_G0024043.1 mouse_genomes_project 18 38516130 38667943 + MGP_CBAJ_P0049056 Pcdhga6 protein_coding protein_coding MGP_CBAJ_T0006913.1 MGP_CBAJ_G0005679.1 mouse_genomes_project 18 32320475 32327403 + Gm26717 lincRNA lincRNA MGP_CBAJ_T0049204.1 MGP_CBAJ_G0024095.1 mouse_genomes_project 18 45497444 45512445 + MGP_CBAJ_P0049204 Spink6 protein_coding protein_coding MGP_CBAJ_T0048731.1 MGP_CBAJ_G0023899.1 mouse_genomes_project 18 23371644 23394524 - MGP_CBAJ_P0048731 Ino80c protein_coding protein_coding MGP_CBAJ_T0048732.1 MGP_CBAJ_G0023899.1 mouse_genomes_project 18 23371650 23394676 - MGP_CBAJ_P0048732 Ino80c protein_coding protein_coding MGP_CBAJ_T0048733.1 MGP_CBAJ_G0023899.1 mouse_genomes_project 18 23373267 23394558 - MGP_CBAJ_P0048733 Ino80c protein_coding protein_coding MGP_CBAJ_T0049693.1 MGP_CBAJ_G0024262.1 mouse_genomes_project 18 79680311 79878813 + MGP_CBAJ_P0049693 Myo5b protein_coding protein_coding MGP_CBAJ_T0049694.1 MGP_CBAJ_G0024262.1 mouse_genomes_project 18 79680339 79762277 + Myo5b protein_coding processed_transcript MGP_CBAJ_T0049695.1 MGP_CBAJ_G0024262.1 mouse_genomes_project 18 79681918 80039338 + MGP_CBAJ_P0049695 Myo5b protein_coding protein_coding MGP_CBAJ_T0049696.1 MGP_CBAJ_G0024262.1 mouse_genomes_project 18 79681986 79932967 + Myo5b protein_coding processed_transcript MGP_CBAJ_T0049697.1 MGP_CBAJ_G0024262.1 mouse_genomes_project 18 79681988 80038650 + MGP_CBAJ_P0049697 Myo5b protein_coding protein_coding MGP_CBAJ_T0049698.1 MGP_CBAJ_G0024262.1 mouse_genomes_project 18 79897954 79914044 + Myo5b protein_coding processed_transcript MGP_CBAJ_T0049699.1 MGP_CBAJ_G0024262.1 mouse_genomes_project 18 79985528 79995145 + Myo5b protein_coding processed_transcript MGP_CBAJ_T0049700.1 MGP_CBAJ_G0024262.1 mouse_genomes_project 18 79991671 79995138 + MGP_CBAJ_P0049700 Myo5b protein_coding protein_coding MGP_CBAJ_T0049701.1 MGP_CBAJ_G0024262.1 mouse_genomes_project 18 79992851 79995136 + Myo5b protein_coding retained_intron MGP_CBAJ_T0049702.1 MGP_CBAJ_G0024262.1 mouse_genomes_project 18 79993640 80000503 + Myo5b protein_coding processed_transcript MGP_CBAJ_T0049703.1 MGP_CBAJ_G0024262.1 mouse_genomes_project 18 80011712 80039322 + Myo5b protein_coding retained_intron MGP_CBAJ_T0011341.1 MGP_CBAJ_G0009479.1 mouse_genomes_project 18 91214025 91214315 - Gm22014 misc_RNA misc_RNA MGP_CBAJ_T0048784.1 MGP_CBAJ_G0023921.1 mouse_genomes_project 18 32063800 32066613 - MGP_CBAJ_P0048784 Sft2d3 protein_coding protein_coding MGP_CBAJ_T0006902.1 MGP_CBAJ_G0005672.1 mouse_genomes_project 18 8549820 8552259 - 1010001N08Rik lincRNA lincRNA MGP_CBAJ_T0006903.1 MGP_CBAJ_G0005672.1 mouse_genomes_project 18 8550664 8553335 - 1010001N08Rik lincRNA lincRNA MGP_CBAJ_T0048660.1 MGP_CBAJ_G0023866.1 mouse_genomes_project 18 11623866 11920233 - MGP_CBAJ_P0048660 Zfp521 protein_coding protein_coding MGP_CBAJ_T0013171.1 MGP_CBAJ_G0011283.1 mouse_genomes_project 18 52378734 52379479 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0049048.1 MGP_CBAJ_G0024037.1 mouse_genomes_project 18 38460397 38667940 + MGP_CBAJ_P0049048 Pcdhga2 protein_coding protein_coding MGP_CBAJ_T0049061.1 MGP_CBAJ_G0024046.1 mouse_genomes_project 18 38537690 38667943 + MGP_CBAJ_P0049061 Pcdhga8 protein_coding protein_coding MGP_CBAJ_T0049855.1 MGP_CBAJ_G0024311.1 mouse_genomes_project 18 91056646 91096004 - MGP_CBAJ_P0049855 Cndp1 protein_coding protein_coding MGP_CBAJ_T0049856.1 MGP_CBAJ_G0024311.1 mouse_genomes_project 18 91075015 91095966 - Cndp1 protein_coding retained_intron MGP_CBAJ_T0049857.1 MGP_CBAJ_G0024311.1 mouse_genomes_project 18 91077183 91095866 - Cndp1 protein_coding retained_intron MGP_CBAJ_T0100302.1 MGP_CBAJ_G0038557.1 mouse_genomes_project 18 85481560 85481681 - Gm25824 snoRNA snoRNA MGP_CBAJ_T0048942.1 MGP_CBAJ_G0023977.1 mouse_genomes_project 18 37031950 37053033 + MGP_CBAJ_P0048942 Cystm1 protein_coding protein_coding MGP_CBAJ_T0048943.1 MGP_CBAJ_G0023977.1 mouse_genomes_project 18 37035034 37094453 + MGP_CBAJ_P0048943 Cystm1 protein_coding protein_coding MGP_CBAJ_T0048944.1 MGP_CBAJ_G0023977.1 mouse_genomes_project 18 37035100 37054568 + Cystm1 protein_coding retained_intron MGP_CBAJ_T0048945.1 MGP_CBAJ_G0023977.1 mouse_genomes_project 18 37035111 37081849 + MGP_CBAJ_P0048945 Cystm1 protein_coding protein_coding MGP_CBAJ_T0048946.1 MGP_CBAJ_G0023977.1 mouse_genomes_project 18 37052093 37094013 + MGP_CBAJ_P0048946 Cystm1 protein_coding protein_coding MGP_CBAJ_T0006937.1 MGP_CBAJ_G0005697.1 mouse_genomes_project 18 65269366 65288340 - Carmn lincRNA lincRNA MGP_CBAJ_T0006938.1 MGP_CBAJ_G0005697.1 mouse_genomes_project 18 65270715 65288387 - Carmn lincRNA lincRNA MGP_CBAJ_T0048682.1 MGP_CBAJ_G0023878.1 mouse_genomes_project 18 19344773 19380426 + MGP_CBAJ_P0048682 Dsg4 protein_coding protein_coding MGP_CBAJ_T0049021.1 MGP_CBAJ_G0024014.1 mouse_genomes_project 18 38080092 38083774 + MGP_CBAJ_P0049021 Pcdhb3 protein_coding protein_coding MGP_CBAJ_T0048992.1 MGP_CBAJ_G0023995.1 mouse_genomes_project 18 37667464 37945882 + MGP_CBAJ_P0048992 Pcdha1 protein_coding protein_coding MGP_CBAJ_T0048993.1 MGP_CBAJ_G0023995.1 mouse_genomes_project 18 37667565 37945878 + MGP_CBAJ_P0048993 Pcdha1 protein_coding protein_coding MGP_CBAJ_T0049690.1 MGP_CBAJ_G0024261.1 mouse_genomes_project 18 79494470 79585461 + MGP_CBAJ_P0049690 Cfap53 protein_coding protein_coding MGP_CBAJ_T0049691.1 MGP_CBAJ_G0024261.1 mouse_genomes_project 18 79494502 79585459 + MGP_CBAJ_P0049691 Cfap53 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049692.1 MGP_CBAJ_G0024261.1 mouse_genomes_project 18 79574530 79585406 + Cfap53 protein_coding processed_transcript MGP_CBAJ_T0048717.1 MGP_CBAJ_G0023894.1 mouse_genomes_project 18 22993013 23015580 + Mapre2 protein_coding retained_intron MGP_CBAJ_T0048718.1 MGP_CBAJ_G0023894.1 mouse_genomes_project 18 22993019 23121781 + MGP_CBAJ_P0048718 Mapre2 protein_coding protein_coding MGP_CBAJ_T0048719.1 MGP_CBAJ_G0023894.1 mouse_genomes_project 18 22993073 23096046 + MGP_CBAJ_P0048719 Mapre2 protein_coding protein_coding MGP_CBAJ_T0048720.1 MGP_CBAJ_G0023894.1 mouse_genomes_project 18 22994405 23130449 + MGP_CBAJ_P0048720 Mapre2 protein_coding protein_coding MGP_CBAJ_T0048721.1 MGP_CBAJ_G0023894.1 mouse_genomes_project 18 22994428 23031823 + Mapre2 protein_coding processed_transcript MGP_CBAJ_T0048722.1 MGP_CBAJ_G0023894.1 mouse_genomes_project 18 23037836 23069204 + Mapre2 protein_coding retained_intron MGP_CBAJ_T0048723.1 MGP_CBAJ_G0023894.1 mouse_genomes_project 18 23037919 23131947 + MGP_CBAJ_P0048723 Mapre2 protein_coding protein_coding MGP_CBAJ_T0048724.1 MGP_CBAJ_G0023894.1 mouse_genomes_project 18 23037919 23129016 + MGP_CBAJ_P0048724 Mapre2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049353.1 MGP_CBAJ_G0024158.1 mouse_genomes_project 18 62159739 62402608 + MGP_CBAJ_P0049353 Adamts19 protein_coding protein_coding MGP_CBAJ_T0048661.1 MGP_CBAJ_G0023867.1 mouse_genomes_project 18 12450273 12450717 + MGP_CBAJ_P0048661 Gm5160 protein_coding protein_coding MGP_CBAJ_T0049782.1 MGP_CBAJ_G0024290.1 mouse_genomes_project 18 84567769 84977776 - MGP_CBAJ_P0049782 Setbp1 protein_coding protein_coding MGP_CBAJ_T0013139.1 MGP_CBAJ_G0011251.1 mouse_genomes_project 18 7276222 7277018 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099045.1 MGP_CBAJ_G0037300.1 mouse_genomes_project 18 67416123 67416216 + Gm24848 snRNA snRNA MGP_CBAJ_T0049823.1 MGP_CBAJ_G0024304.1 mouse_genomes_project 18 88653688 88667959 - MGP_CBAJ_P0049823 Galr1 protein_coding protein_coding MGP_CBAJ_T0013184.1 MGP_CBAJ_G0011296.1 mouse_genomes_project 18 91107992 91108860 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006925.1 MGP_CBAJ_G0005688.1 mouse_genomes_project 18 39105314 39117230 - 1700086O06Rik lincRNA lincRNA MGP_CBAJ_T0006926.1 MGP_CBAJ_G0005688.1 mouse_genomes_project 18 39105314 39117597 - 1700086O06Rik lincRNA lincRNA MGP_CBAJ_T0010150.1 MGP_CBAJ_G0008288.1 mouse_genomes_project 18 80197458 80197540 - Gm25594 miRNA miRNA MGP_CBAJ_T0013165.1 MGP_CBAJ_G0011277.1 mouse_genomes_project 18 41884036 41884477 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010156.1 MGP_CBAJ_G0008294.1 mouse_genomes_project 18 96777022 96777092 + Gm22694 miRNA miRNA MGP_CBAJ_T0048747.1 MGP_CBAJ_G0023904.1 mouse_genomes_project 18 23920607 23957488 + MGP_CBAJ_P0048747 Elp2 protein_coding protein_coding MGP_CBAJ_T0049288.1 MGP_CBAJ_G0024126.1 mouse_genomes_project 18 52758651 52759695 - MGP_CBAJ_P0049288 Hdhd1a protein_coding protein_coding MGP_CBAJ_T0049397.1 MGP_CBAJ_G0024173.1 mouse_genomes_project 18 64313675 64353541 - MGP_CBAJ_P0049397 Tcof1 protein_coding protein_coding MGP_CBAJ_T0049398.1 MGP_CBAJ_G0024173.1 mouse_genomes_project 18 64313675 64353499 - MGP_CBAJ_P0049398 Tcof1 protein_coding protein_coding MGP_CBAJ_T0049399.1 MGP_CBAJ_G0024173.1 mouse_genomes_project 18 64316590 64353529 - MGP_CBAJ_P0049399 Tcof1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049400.1 MGP_CBAJ_G0024173.1 mouse_genomes_project 18 64318623 64353488 - MGP_CBAJ_P0049400 Tcof1 protein_coding protein_coding MGP_CBAJ_T0049401.1 MGP_CBAJ_G0024173.1 mouse_genomes_project 18 64328671 64329632 - Tcof1 protein_coding retained_intron MGP_CBAJ_T0049402.1 MGP_CBAJ_G0024173.1 mouse_genomes_project 18 64340741 64353016 - MGP_CBAJ_P0049402 Tcof1 protein_coding protein_coding MGP_CBAJ_T0049059.1 MGP_CBAJ_G0024045.1 mouse_genomes_project 18 38532365 38667940 + MGP_CBAJ_P0049059 Pcdhgb4 protein_coding protein_coding MGP_CBAJ_T0049060.1 MGP_CBAJ_G0024045.1 mouse_genomes_project 18 38532379 38541340 + Pcdhgb4 protein_coding processed_transcript MGP_CBAJ_T0049211.1 MGP_CBAJ_G0024100.1 mouse_genomes_project 18 45646295 45653086 + MGP_CBAJ_P0049211 Gm10542 protein_coding protein_coding MGP_CBAJ_T0013138.1 MGP_CBAJ_G0011250.1 mouse_genomes_project 18 7272106 7277015 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003725.1 MGP_CBAJ_G0003348.1 mouse_genomes_project 18 20736375 20740111 + 4930426D05Rik antisense antisense MGP_CBAJ_T0003726.1 MGP_CBAJ_G0003348.1 mouse_genomes_project 18 20736492 20740104 + 4930426D05Rik antisense antisense MGP_CBAJ_T0003727.1 MGP_CBAJ_G0003348.1 mouse_genomes_project 18 20737487 20740120 + 4930426D05Rik antisense antisense MGP_CBAJ_T0003728.1 MGP_CBAJ_G0003348.1 mouse_genomes_project 18 20737490 20741068 + 4930426D05Rik antisense antisense MGP_CBAJ_T0049483.1 MGP_CBAJ_G0024205.1 mouse_genomes_project 18 68160237 68184085 + MGP_CBAJ_P0049483 St8sia3 protein_coding protein_coding MGP_CBAJ_T0049484.1 MGP_CBAJ_G0024205.1 mouse_genomes_project 18 68173944 68177932 + MGP_CBAJ_P0049484 St8sia3 protein_coding protein_coding MGP_CBAJ_T0049485.1 MGP_CBAJ_G0024205.1 mouse_genomes_project 18 68174125 68177789 + St8sia3 protein_coding processed_transcript MGP_CBAJ_T0049486.1 MGP_CBAJ_G0024205.1 mouse_genomes_project 18 68174756 68177861 + St8sia3 protein_coding retained_intron MGP_CBAJ_T0010143.1 MGP_CBAJ_G0008281.1 mouse_genomes_project 18 65268939 65269002 - Mir143 miRNA miRNA MGP_CBAJ_T0011317.1 MGP_CBAJ_G0009455.1 mouse_genomes_project 18 755189 755512 + Gm24632 misc_RNA misc_RNA MGP_CBAJ_T0049333.1 MGP_CBAJ_G0024147.1 mouse_genomes_project 18 59692123 59744602 + MGP_CBAJ_P0049333 Lmnb1 protein_coding protein_coding MGP_CBAJ_T0049334.1 MGP_CBAJ_G0024147.1 mouse_genomes_project 18 59714836 59719852 + Lmnb1 protein_coding retained_intron MGP_CBAJ_T0048564.1 MGP_CBAJ_G0023837.1 mouse_genomes_project 18 5015712 5075567 + MGP_CBAJ_P0048564 Wac protein_coding protein_coding MGP_CBAJ_T0048565.1 MGP_CBAJ_G0023837.1 mouse_genomes_project 18 5015725 5021727 + MGP_CBAJ_P0048565 Wac protein_coding protein_coding MGP_CBAJ_T0048566.1 MGP_CBAJ_G0023837.1 mouse_genomes_project 18 5015730 5075567 + MGP_CBAJ_P0048566 Wac protein_coding protein_coding MGP_CBAJ_T0048567.1 MGP_CBAJ_G0023837.1 mouse_genomes_project 18 5015946 5075485 + MGP_CBAJ_P0048567 Wac protein_coding protein_coding MGP_CBAJ_T0048568.1 MGP_CBAJ_G0023837.1 mouse_genomes_project 18 5016076 5021652 + MGP_CBAJ_P0048568 Wac protein_coding protein_coding MGP_CBAJ_T0048569.1 MGP_CBAJ_G0023837.1 mouse_genomes_project 18 5019756 5069132 + MGP_CBAJ_P0048569 Wac protein_coding protein_coding MGP_CBAJ_T0048570.1 MGP_CBAJ_G0023837.1 mouse_genomes_project 18 5019777 5055543 + MGP_CBAJ_P0048570 Wac protein_coding protein_coding MGP_CBAJ_T0048571.1 MGP_CBAJ_G0023837.1 mouse_genomes_project 18 5020031 5068939 + MGP_CBAJ_P0048571 Wac protein_coding protein_coding MGP_CBAJ_T0048572.1 MGP_CBAJ_G0023837.1 mouse_genomes_project 18 5020031 5075567 + MGP_CBAJ_P0048572 Wac protein_coding protein_coding MGP_CBAJ_T0048573.1 MGP_CBAJ_G0023837.1 mouse_genomes_project 18 5021750 5074992 + MGP_CBAJ_P0048573 Wac protein_coding protein_coding MGP_CBAJ_T0048574.1 MGP_CBAJ_G0023837.1 mouse_genomes_project 18 5055525 5069139 + MGP_CBAJ_P0048574 Wac protein_coding protein_coding MGP_CBAJ_T0048575.1 MGP_CBAJ_G0023837.1 mouse_genomes_project 18 5063435 5069235 + Wac protein_coding retained_intron MGP_CBAJ_T0048576.1 MGP_CBAJ_G0023837.1 mouse_genomes_project 18 5063453 5071999 + MGP_CBAJ_P0048576 Wac protein_coding protein_coding MGP_CBAJ_T0048577.1 MGP_CBAJ_G0023837.1 mouse_genomes_project 18 5071134 5128452 + MGP_CBAJ_P0048577 Wac protein_coding protein_coding MGP_CBAJ_T0049714.1 MGP_CBAJ_G0024269.1 mouse_genomes_project 18 80827513 81114382 - MGP_CBAJ_P0049714 Ctif protein_coding protein_coding MGP_CBAJ_T0048728.1 MGP_CBAJ_G0023898.1 mouse_genomes_project 18 23261976 23273117 - MGP_CBAJ_P0048728 Zfp24 protein_coding protein_coding MGP_CBAJ_T0048729.1 MGP_CBAJ_G0023898.1 mouse_genomes_project 18 23266199 23272595 - MGP_CBAJ_P0048729 Zfp24 protein_coding protein_coding MGP_CBAJ_T0048730.1 MGP_CBAJ_G0023898.1 mouse_genomes_project 18 23270245 23272645 - MGP_CBAJ_P0048730 Zfp24 protein_coding protein_coding MGP_CBAJ_T0049531.1 MGP_CBAJ_G0024218.1 mouse_genomes_project 18 70144980 70161671 - MGP_CBAJ_P0049531 Cplx4 protein_coding protein_coding MGP_CBAJ_T0048812.1 MGP_CBAJ_G0023937.1 mouse_genomes_project 18 34076075 34313912 - MGP_CBAJ_P0048812 Epb41l4a protein_coding protein_coding MGP_CBAJ_T0048941.1 MGP_CBAJ_G0023976.1 mouse_genomes_project 18 36960906 36981331 + MGP_CBAJ_P0048941 Pura protein_coding protein_coding MGP_CBAJ_T0006942.1 MGP_CBAJ_G0005700.1 mouse_genomes_project 18 70124164 70127074 + Raxos1 lincRNA lincRNA MGP_CBAJ_T0049314.1 MGP_CBAJ_G0024141.1 mouse_genomes_project 18 56450155 56559855 + MGP_CBAJ_P0049314 Csnk1g3 protein_coding protein_coding MGP_CBAJ_T0048829.1 MGP_CBAJ_G0023941.1 mouse_genomes_project 18 34798956 34832912 + MGP_CBAJ_P0048829 Pkd2l2 protein_coding protein_coding MGP_CBAJ_T0048830.1 MGP_CBAJ_G0023941.1 mouse_genomes_project 18 34798956 34833905 + MGP_CBAJ_P0048830 Pkd2l2 protein_coding protein_coding MGP_CBAJ_T0049754.1 MGP_CBAJ_G0024279.1 mouse_genomes_project 18 82904945 83100395 + MGP_CBAJ_P0049754 Loxhd1 protein_coding protein_coding MGP_CBAJ_T0049755.1 MGP_CBAJ_G0024279.1 mouse_genomes_project 18 82932837 83027443 + MGP_CBAJ_P0049755 Loxhd1 protein_coding protein_coding MGP_CBAJ_T0049756.1 MGP_CBAJ_G0024279.1 mouse_genomes_project 18 82967194 83060501 + MGP_CBAJ_P0049756 Loxhd1 protein_coding protein_coding MGP_CBAJ_T0049757.1 MGP_CBAJ_G0024279.1 mouse_genomes_project 18 83020261 83100479 + MGP_CBAJ_P0049757 Loxhd1 protein_coding protein_coding MGP_CBAJ_T0049758.1 MGP_CBAJ_G0024279.1 mouse_genomes_project 18 83058537 83100024 + MGP_CBAJ_P0049758 Loxhd1 protein_coding protein_coding MGP_CBAJ_T0013145.1 MGP_CBAJ_G0011257.1 mouse_genomes_project 18 10769420 10770060 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010141.1 MGP_CBAJ_G0008279.1 mouse_genomes_project 18 64963241 64963307 - Mir378a miRNA miRNA MGP_CBAJ_T0048920.1 MGP_CBAJ_G0023970.1 mouse_genomes_project 18 36279590 36295704 - MGP_CBAJ_P0048920 Ecscr protein_coding protein_coding MGP_CBAJ_T0048921.1 MGP_CBAJ_G0023970.1 mouse_genomes_project 18 36279590 36294390 - MGP_CBAJ_P0048921 Ecscr protein_coding protein_coding MGP_CBAJ_T0048922.1 MGP_CBAJ_G0023970.1 mouse_genomes_project 18 36279777 36283795 - MGP_CBAJ_P0048922 Ecscr protein_coding protein_coding MGP_CBAJ_T0048923.1 MGP_CBAJ_G0023970.1 mouse_genomes_project 18 36280264 36283795 - MGP_CBAJ_P0048923 Ecscr protein_coding protein_coding MGP_CBAJ_T0048924.1 MGP_CBAJ_G0023970.1 mouse_genomes_project 18 36283752 36284392 - Ecscr protein_coding processed_transcript MGP_CBAJ_T0048925.1 MGP_CBAJ_G0023970.1 mouse_genomes_project 18 36284019 36295641 - Ecscr protein_coding processed_transcript MGP_CBAJ_T0049580.1 MGP_CBAJ_G0024241.1 mouse_genomes_project 18 73579626 73585141 - MGP_CBAJ_P0049580 4930546C10Rik protein_coding protein_coding MGP_CBAJ_T0099027.1 MGP_CBAJ_G0037282.1 mouse_genomes_project 18 23051089 23051191 - Gm23207 snRNA snRNA MGP_CBAJ_T0048984.1 MGP_CBAJ_G0023993.1 mouse_genomes_project 18 37512170 37519835 + Hars2 protein_coding processed_transcript MGP_CBAJ_T0048985.1 MGP_CBAJ_G0023993.1 mouse_genomes_project 18 37512170 37521779 + MGP_CBAJ_P0048985 Hars2 protein_coding protein_coding MGP_CBAJ_T0048986.1 MGP_CBAJ_G0023993.1 mouse_genomes_project 18 37512393 37520911 + MGP_CBAJ_P0048986 Hars2 protein_coding protein_coding MGP_CBAJ_T0048987.1 MGP_CBAJ_G0023993.1 mouse_genomes_project 18 37512431 37515674 + Hars2 protein_coding retained_intron MGP_CBAJ_T0048988.1 MGP_CBAJ_G0023993.1 mouse_genomes_project 18 37516231 37517479 + Hars2 protein_coding retained_intron MGP_CBAJ_T0048989.1 MGP_CBAJ_G0023993.1 mouse_genomes_project 18 37517036 37519376 + Hars2 protein_coding retained_intron MGP_CBAJ_T0048990.1 MGP_CBAJ_G0023993.1 mouse_genomes_project 18 37519229 37520670 + Hars2 protein_coding retained_intron MGP_CBAJ_T0049774.1 MGP_CBAJ_G0024285.1 mouse_genomes_project 18 83674735 83784614 + MGP_CBAJ_P0049774 Epg5 protein_coding protein_coding MGP_CBAJ_T0003739.1 MGP_CBAJ_G0003359.1 mouse_genomes_project 18 38626153 38628358 - BC037039 antisense antisense MGP_CBAJ_T0049174.1 MGP_CBAJ_G0024080.1 mouse_genomes_project 18 43501591 43516726 - MGP_CBAJ_P0049174 Plac8l1 protein_coding protein_coding MGP_CBAJ_T0048918.1 MGP_CBAJ_G0023968.1 mouse_genomes_project 18 36233851 36269660 - MGP_CBAJ_P0048918 Dnajc18 protein_coding protein_coding MGP_CBAJ_T0013163.1 MGP_CBAJ_G0011275.1 mouse_genomes_project 18 39723411 39724263 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010149.1 MGP_CBAJ_G0008287.1 mouse_genomes_project 18 75307199 75307303 + Mir6357 miRNA miRNA MGP_CBAJ_T0049387.1 MGP_CBAJ_G0024170.1 mouse_genomes_project 18 64182119 64213562 - MGP_CBAJ_P0049387 Ndst1 protein_coding protein_coding MGP_CBAJ_T0049748.1 MGP_CBAJ_G0024276.1 mouse_genomes_project 18 82648558 82761223 + MGP_CBAJ_P0049748 Pias2 protein_coding protein_coding MGP_CBAJ_T0049749.1 MGP_CBAJ_G0024276.1 mouse_genomes_project 18 82650925 82761223 + MGP_CBAJ_P0049749 Pias2 protein_coding protein_coding MGP_CBAJ_T0049750.1 MGP_CBAJ_G0024276.1 mouse_genomes_project 18 82650925 82752454 + MGP_CBAJ_P0049750 Pias2 protein_coding protein_coding MGP_CBAJ_T0006949.1 MGP_CBAJ_G0005707.1 mouse_genomes_project 18 89081056 89085593 - 2210420H20Rik lincRNA lincRNA MGP_CBAJ_T0049419.1 MGP_CBAJ_G0024181.1 mouse_genomes_project 18 64726733 64748562 - MGP_CBAJ_P0049419 Slc26a2 protein_coding protein_coding MGP_CBAJ_T0049420.1 MGP_CBAJ_G0024181.1 mouse_genomes_project 18 64734184 64737328 - MGP_CBAJ_P0049420 Slc26a2 protein_coding protein_coding MGP_CBAJ_T0049421.1 MGP_CBAJ_G0024181.1 mouse_genomes_project 18 64738663 64748330 - MGP_CBAJ_P0049421 Slc26a2 protein_coding protein_coding MGP_CBAJ_T0049422.1 MGP_CBAJ_G0024181.1 mouse_genomes_project 18 64744136 64748307 - Slc26a2 protein_coding retained_intron MGP_CBAJ_T0006935.1 MGP_CBAJ_G0005696.1 mouse_genomes_project 18 65259270 65267036 + Bvht lincRNA lincRNA MGP_CBAJ_T0006936.1 MGP_CBAJ_G0005696.1 mouse_genomes_project 18 65259381 65267216 + Bvht lincRNA lincRNA MGP_CBAJ_T0049029.1 MGP_CBAJ_G0024020.1 mouse_genomes_project 18 38172050 38180377 + MGP_CBAJ_P0049029 Pcdhb9 protein_coding protein_coding MGP_CBAJ_T0000978.1 MGP_CBAJ_G0000910.1 mouse_genomes_project 18 86414100 86417146 + TEC TEC MGP_CBAJ_T0049292.1 MGP_CBAJ_G0024130.1 mouse_genomes_project 18 54872604 54915158 + MGP_CBAJ_P0049292 Srfbp1 protein_coding protein_coding MGP_CBAJ_T0006930.1 MGP_CBAJ_G0005692.1 mouse_genomes_project 18 57058480 57093766 + Redrum lincRNA lincRNA MGP_CBAJ_T0049453.1 MGP_CBAJ_G0024195.1 mouse_genomes_project 18 66206716 66252140 - MGP_CBAJ_P0049453 Fbxo38 protein_coding protein_coding MGP_CBAJ_T0048997.1 MGP_CBAJ_G0023998.1 mouse_genomes_project 18 37691404 37945878 + MGP_CBAJ_P0048997 Pcdha4 protein_coding protein_coding MGP_CBAJ_T0048998.1 MGP_CBAJ_G0023998.1 mouse_genomes_project 18 37691414 37697451 + Pcdha4 protein_coding retained_intron MGP_CBAJ_T0048999.1 MGP_CBAJ_G0023998.1 mouse_genomes_project 18 37692776 37945882 + MGP_CBAJ_P0048999 Pcdha4 protein_coding protein_coding MGP_CBAJ_T0000966.1 MGP_CBAJ_G0000898.1 mouse_genomes_project 18 2596043 2599707 - TEC TEC MGP_CBAJ_T0006931.1 MGP_CBAJ_G0005693.1 mouse_genomes_project 18 57690932 57698809 + Gm26742 lincRNA lincRNA MGP_CBAJ_T0048515.1 MGP_CBAJ_G0023827.1 mouse_genomes_project 18 2204076 2342164 - MGP_CBAJ_P0048515 Zfp438 protein_coding protein_coding MGP_CBAJ_T0049724.1 MGP_CBAJ_G0024272.1 mouse_genomes_project 18 82416859 82463300 + MGP_CBAJ_P0049724 Skor2 protein_coding protein_coding MGP_CBAJ_T0049179.1 MGP_CBAJ_G0024084.1 mouse_genomes_project 18 43885835 43960991 + MGP_CBAJ_P0049179 Tcerg1 protein_coding protein_coding MGP_CBAJ_T0049180.1 MGP_CBAJ_G0024084.1 mouse_genomes_project 18 43885848 43960284 + MGP_CBAJ_P0049180 Tcerg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0013180.1 MGP_CBAJ_G0011292.1 mouse_genomes_project 18 73928876 73929711 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0049784.1 MGP_CBAJ_G0024292.1 mouse_genomes_project 18 86101398 86102855 - MGP_CBAJ_P0049784 protein_coding protein_coding MGP_CBAJ_T0048919.1 MGP_CBAJ_G0023969.1 mouse_genomes_project 18 36269740 36306351 + 1700066B19Rik protein_coding processed_transcript MGP_CBAJ_T0048926.1 MGP_CBAJ_G0023969.1 mouse_genomes_project 18 36303546 36307450 + MGP_CBAJ_P0048926 1700066B19Rik protein_coding protein_coding MGP_CBAJ_T0048647.1 MGP_CBAJ_G0023863.1 mouse_genomes_project 18 10600113 10817495 - MGP_CBAJ_P0048647 Osbpl1a protein_coding protein_coding MGP_CBAJ_T0048648.1 MGP_CBAJ_G0023863.1 mouse_genomes_project 18 10601004 10766994 - MGP_CBAJ_P0048648 Osbpl1a protein_coding protein_coding MGP_CBAJ_T0048649.1 MGP_CBAJ_G0023863.1 mouse_genomes_project 18 10607303 10611884 - Osbpl1a protein_coding retained_intron MGP_CBAJ_T0048650.1 MGP_CBAJ_G0023863.1 mouse_genomes_project 18 10611549 10728689 - MGP_CBAJ_P0048650 Osbpl1a protein_coding protein_coding MGP_CBAJ_T0048651.1 MGP_CBAJ_G0023863.1 mouse_genomes_project 18 10613212 10756942 - Osbpl1a protein_coding retained_intron MGP_CBAJ_T0048652.1 MGP_CBAJ_G0023863.1 mouse_genomes_project 18 10616030 10734495 - MGP_CBAJ_P0048652 Osbpl1a protein_coding protein_coding MGP_CBAJ_T0048653.1 MGP_CBAJ_G0023863.1 mouse_genomes_project 18 10735605 10817495 - Osbpl1a protein_coding retained_intron MGP_CBAJ_T0048654.1 MGP_CBAJ_G0023863.1 mouse_genomes_project 18 10769110 10817431 - MGP_CBAJ_P0048654 Osbpl1a protein_coding protein_coding MGP_CBAJ_T0048655.1 MGP_CBAJ_G0023863.1 mouse_genomes_project 18 10781524 10817460 - MGP_CBAJ_P0048655 Osbpl1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0048656.1 MGP_CBAJ_G0023863.1 mouse_genomes_project 18 10802380 10817446 - Osbpl1a protein_coding retained_intron MGP_CBAJ_T0048657.1 MGP_CBAJ_G0023863.1 mouse_genomes_project 18 10807943 10817443 - Osbpl1a protein_coding processed_transcript MGP_CBAJ_T0049123.1 MGP_CBAJ_G0024065.1 mouse_genomes_project 18 39167505 39191332 + MGP_CBAJ_P0049123 Rnf14 protein_coding protein_coding MGP_CBAJ_T0013178.1 MGP_CBAJ_G0011290.1 mouse_genomes_project 18 63694087 63695303 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0003733.1 MGP_CBAJ_G0003353.1 mouse_genomes_project 18 37710492 37711050 - Gm37753 antisense antisense MGP_CBAJ_T0013182.1 MGP_CBAJ_G0011294.1 mouse_genomes_project 18 82829160 82830134 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0049821.1 MGP_CBAJ_G0024302.1 mouse_genomes_project 18 86794593 87014380 - MGP_CBAJ_P0049821 Atp9b protein_coding protein_coding MGP_CBAJ_T0048609.1 MGP_CBAJ_G0023852.1 mouse_genomes_project 18 8553277 8593634 + MGP_CBAJ_P0048609 Gata6 protein_coding protein_coding MGP_CBAJ_T0003730.1 MGP_CBAJ_G0003350.1 mouse_genomes_project 18 36426185 36426880 - Gm29417 antisense antisense MGP_CBAJ_T0049364.1 MGP_CBAJ_G0024163.1 mouse_genomes_project 18 63772693 63788820 + MGP_CBAJ_P0049364 F830016B08Rik protein_coding protein_coding MGP_CBAJ_T0099056.1 MGP_CBAJ_G0037311.1 mouse_genomes_project 18 91219089 91219245 - Gm25005 snRNA snRNA MGP_CBAJ_T0010133.1 MGP_CBAJ_G0008271.1 mouse_genomes_project 18 60804953 60805049 + Gm44491 miRNA miRNA MGP_CBAJ_T0003720.1 MGP_CBAJ_G0003343.1 mouse_genomes_project 18 8239662 8243823 - Mir133a-1hg antisense antisense MGP_CBAJ_T0049581.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74026729 74265356 + MGP_CBAJ_P0049581 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049582.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74027519 74396182 + MGP_CBAJ_P0049582 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049583.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74027862 74400916 + MGP_CBAJ_P0049583 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049584.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74027865 74395217 + MGP_CBAJ_P0049584 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049585.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74027902 74395105 + MGP_CBAJ_P0049585 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049586.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74029092 74399803 + MGP_CBAJ_P0049586 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049587.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74029092 74396362 + MGP_CBAJ_P0049587 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049588.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74029092 74395231 + MGP_CBAJ_P0049588 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049589.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74029106 74395039 + MGP_CBAJ_P0049589 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049590.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74029108 74344901 + MGP_CBAJ_P0049590 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049591.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74029118 74184381 + Tcf4 protein_coding processed_transcript MGP_CBAJ_T0049592.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74029208 74395039 + MGP_CBAJ_P0049592 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049593.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74029531 74341724 + MGP_CBAJ_P0049593 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049594.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74029730 74395066 + MGP_CBAJ_P0049594 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049595.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74032827 74266021 + MGP_CBAJ_P0049595 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049596.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74032827 74395039 + MGP_CBAJ_P0049596 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049597.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74032873 74043534 + Tcf4 protein_coding processed_transcript MGP_CBAJ_T0049598.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74034460 74265915 + MGP_CBAJ_P0049598 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049599.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74034471 74395279 + MGP_CBAJ_P0049599 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049600.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74034473 74265922 + MGP_CBAJ_P0049600 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049601.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74034728 74395290 + MGP_CBAJ_P0049601 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049602.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74034787 74360477 + Tcf4 protein_coding processed_transcript MGP_CBAJ_T0049603.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74035141 74350990 + MGP_CBAJ_P0049603 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049604.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74110324 74395280 + MGP_CBAJ_P0049604 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049605.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74195936 74344949 + MGP_CBAJ_P0049605 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049606.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74199958 74395086 + MGP_CBAJ_P0049606 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049607.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74200097 74365805 + MGP_CBAJ_P0049607 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049608.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74200219 74360518 + MGP_CBAJ_P0049608 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049609.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74220860 74395095 + MGP_CBAJ_P0049609 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049610.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74221099 74351046 + MGP_CBAJ_P0049610 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049611.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74221147 74395039 + MGP_CBAJ_P0049611 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049612.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74221157 74395118 + MGP_CBAJ_P0049612 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049613.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74221202 74344986 + MGP_CBAJ_P0049613 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049614.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74222536 74351006 + MGP_CBAJ_P0049614 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049615.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74222649 74394963 + MGP_CBAJ_P0049615 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049616.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74222852 74366004 + MGP_CBAJ_P0049616 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049617.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74222875 74225703 + Tcf4 protein_coding retained_intron MGP_CBAJ_T0049618.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74222889 74265961 + Tcf4 protein_coding processed_transcript MGP_CBAJ_T0049619.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74223212 74395101 + MGP_CBAJ_P0049619 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049620.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74223352 74344948 + MGP_CBAJ_P0049620 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049621.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74223532 74341770 + Tcf4 protein_coding retained_intron MGP_CBAJ_T0049622.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74264280 74359272 + Tcf4 protein_coding processed_transcript MGP_CBAJ_T0049623.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74264608 74345027 + Tcf4 protein_coding processed_transcript MGP_CBAJ_T0049624.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74296663 74395286 + MGP_CBAJ_P0049624 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049625.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74297012 74365952 + MGP_CBAJ_P0049625 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049626.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74297053 74386447 + MGP_CBAJ_P0049626 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049627.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74297059 74394544 + MGP_CBAJ_P0049627 Tcf4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049628.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74297066 74396364 + MGP_CBAJ_P0049628 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049629.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74297067 74341860 + Tcf4 protein_coding retained_intron MGP_CBAJ_T0049630.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74297067 74301091 + Tcf4 protein_coding retained_intron MGP_CBAJ_T0049631.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74297084 74365921 + Tcf4 protein_coding processed_transcript MGP_CBAJ_T0049632.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74297223 74359296 + MGP_CBAJ_P0049632 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049633.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74297824 74365819 + MGP_CBAJ_P0049633 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049634.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74303178 74360465 + MGP_CBAJ_P0049634 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049635.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74318321 74395039 + MGP_CBAJ_P0049635 Tcf4 protein_coding protein_coding MGP_CBAJ_T0049636.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74364720 74368346 + Tcf4 protein_coding retained_intron MGP_CBAJ_T0049637.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74390413 74396364 + Tcf4 protein_coding retained_intron MGP_CBAJ_T0049638.1 MGP_CBAJ_G0024242.1 mouse_genomes_project 18 74394200 74395473 + Tcf4 protein_coding retained_intron MGP_CBAJ_T0048516.1 MGP_CBAJ_G0023828.1 mouse_genomes_project 18 2599821 2798527 + MGP_CBAJ_P0048516 Zeb1 protein_coding protein_coding MGP_CBAJ_T0048517.1 MGP_CBAJ_G0023828.1 mouse_genomes_project 18 2599833 2725687 + Zeb1 protein_coding retained_intron MGP_CBAJ_T0048518.1 MGP_CBAJ_G0023828.1 mouse_genomes_project 18 2599852 2786297 + MGP_CBAJ_P0048518 Zeb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048519.1 MGP_CBAJ_G0023828.1 mouse_genomes_project 18 2599852 2785914 + MGP_CBAJ_P0048519 Zeb1 protein_coding protein_coding MGP_CBAJ_T0048520.1 MGP_CBAJ_G0023828.1 mouse_genomes_project 18 2599873 2785951 + MGP_CBAJ_P0048520 Zeb1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048521.1 MGP_CBAJ_G0023828.1 mouse_genomes_project 18 2601274 2650488 + Zeb1 protein_coding processed_transcript MGP_CBAJ_T0048522.1 MGP_CBAJ_G0023828.1 mouse_genomes_project 18 2601568 2778463 + MGP_CBAJ_P0048522 Zeb1 protein_coding protein_coding MGP_CBAJ_T0048523.1 MGP_CBAJ_G0023828.1 mouse_genomes_project 18 2601827 2778590 + Zeb1 protein_coding processed_transcript MGP_CBAJ_T0048524.1 MGP_CBAJ_G0023828.1 mouse_genomes_project 18 2602169 2787123 + Zeb1 protein_coding retained_intron MGP_CBAJ_T0048525.1 MGP_CBAJ_G0023828.1 mouse_genomes_project 18 2611709 2651914 + Zeb1 protein_coding processed_transcript MGP_CBAJ_T0048526.1 MGP_CBAJ_G0023828.1 mouse_genomes_project 18 2642341 2796123 + MGP_CBAJ_P0048526 Zeb1 protein_coding unknown_likely_coding MGP_CBAJ_T0048527.1 MGP_CBAJ_G0023828.1 mouse_genomes_project 18 2775447 2795861 + Zeb1 protein_coding processed_transcript MGP_CBAJ_T0099039.1 MGP_CBAJ_G0037294.1 mouse_genomes_project 18 54549751 54549858 - Gm22259 snRNA snRNA MGP_CBAJ_T0049549.1 MGP_CBAJ_G0024226.1 mouse_genomes_project 18 71799857 71833214 + MGP_CBAJ_P0049549 Cidea protein_coding protein_coding MGP_CBAJ_T0048702.1 MGP_CBAJ_G0023891.1 mouse_genomes_project 18 21472977 21657638 + MGP_CBAJ_P0048702 Asxl3 protein_coding unknown_likely_coding MGP_CBAJ_T0048703.1 MGP_CBAJ_G0023891.1 mouse_genomes_project 18 21473510 21507559 + Asxl3 protein_coding retained_intron MGP_CBAJ_T0048704.1 MGP_CBAJ_G0023891.1 mouse_genomes_project 18 21473716 21662925 + MGP_CBAJ_P0048704 Asxl3 protein_coding protein_coding MGP_CBAJ_T0048705.1 MGP_CBAJ_G0023891.1 mouse_genomes_project 18 21473716 21662713 + MGP_CBAJ_P0048705 Asxl3 protein_coding protein_coding MGP_CBAJ_T0099036.1 MGP_CBAJ_G0037291.1 mouse_genomes_project 18 51629265 51629419 - Gm25440 snRNA snRNA MGP_CBAJ_T0049568.1 MGP_CBAJ_G0024237.1 mouse_genomes_project 18 72823743 72863899 - MGP_CBAJ_P0049568 Fam210a protein_coding protein_coding MGP_CBAJ_T0049569.1 MGP_CBAJ_G0024237.1 mouse_genomes_project 18 72839472 72863768 - MGP_CBAJ_P0049569 Fam210a protein_coding protein_coding MGP_CBAJ_T0006941.1 MGP_CBAJ_G0005699.1 mouse_genomes_project 18 67232534 67256630 + Gm26972 lincRNA lincRNA MGP_CBAJ_T0099046.1 MGP_CBAJ_G0037301.1 mouse_genomes_project 18 67775639 67775714 - Gm24384 snRNA snRNA MGP_CBAJ_T0048684.1 MGP_CBAJ_G0023880.1 mouse_genomes_project 18 19478388 19535537 + MGP_CBAJ_P0048684 Dsg2 protein_coding protein_coding MGP_CBAJ_T0048685.1 MGP_CBAJ_G0023880.1 mouse_genomes_project 18 19478469 19509040 + MGP_CBAJ_P0048685 Dsg2 protein_coding protein_coding MGP_CBAJ_T0048686.1 MGP_CBAJ_G0023880.1 mouse_genomes_project 18 19478560 19506403 + MGP_CBAJ_P0048686 Dsg2 protein_coding protein_coding MGP_CBAJ_T0049870.1 MGP_CBAJ_G0024316.1 mouse_genomes_project 18 91459383 91463520 - MGP_CBAJ_P0049870 Timm21 protein_coding protein_coding MGP_CBAJ_T0099053.1 MGP_CBAJ_G0037308.1 mouse_genomes_project 18 87125239 87125357 + Gm25718 snRNA snRNA MGP_CBAJ_T0011335.1 MGP_CBAJ_G0009473.1 mouse_genomes_project 18 58826920 58827226 - Gm22484 misc_RNA misc_RNA MGP_CBAJ_T0049070.1 MGP_CBAJ_G0024053.1 mouse_genomes_project 18 38583607 38667943 + MGP_CBAJ_P0049070 Pcdhga12 protein_coding protein_coding MGP_CBAJ_T0049071.1 MGP_CBAJ_G0024053.1 mouse_genomes_project 18 38583808 38588492 + Pcdhga12 protein_coding retained_intron MGP_CBAJ_T0011338.1 MGP_CBAJ_G0009476.1 mouse_genomes_project 18 74500995 74501105 - Gm22508 misc_RNA misc_RNA MGP_CBAJ_T0013159.1 MGP_CBAJ_G0011271.1 mouse_genomes_project 18 38216311 38217182 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0097993.1 MGP_CBAJ_G0036266.1 mouse_genomes_project 18 18639937 18640035 + Gm24238 rRNA rRNA MGP_CBAJ_T0003729.1 MGP_CBAJ_G0003349.1 mouse_genomes_project 18 22991128 22992986 - Gm15972 antisense antisense MGP_CBAJ_T0049313.1 MGP_CBAJ_G0024140.1 mouse_genomes_project 18 56252404 56319635 - MGP_CBAJ_P0049313 Cep120 protein_coding protein_coding MGP_CBAJ_T0049886.1 MGP_CBAJ_G0024323.1 mouse_genomes_project 18 97632371 97671508 + MGP_CBAJ_P0049886 Tmx3 protein_coding protein_coding MGP_CBAJ_T0010114.1 MGP_CBAJ_G0008252.1 mouse_genomes_project 18 8240848 8240916 - Mir133a-1 miRNA miRNA MGP_CBAJ_T0049837.1 MGP_CBAJ_G0024306.1 mouse_genomes_project 18 88889891 89013600 - MGP_CBAJ_P0049837 Zfp236 protein_coding protein_coding MGP_CBAJ_T0049838.1 MGP_CBAJ_G0024306.1 mouse_genomes_project 18 88889893 89012534 - MGP_CBAJ_P0049838 Zfp236 protein_coding unknown_likely_coding MGP_CBAJ_T0049839.1 MGP_CBAJ_G0024306.1 mouse_genomes_project 18 88891774 88913861 - MGP_CBAJ_P0049839 Zfp236 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049840.1 MGP_CBAJ_G0024306.1 mouse_genomes_project 18 88893453 89012609 - MGP_CBAJ_P0049840 Zfp236 protein_coding protein_coding MGP_CBAJ_T0049841.1 MGP_CBAJ_G0024306.1 mouse_genomes_project 18 88893453 89012609 - MGP_CBAJ_P0049841 Zfp236 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049842.1 MGP_CBAJ_G0024306.1 mouse_genomes_project 18 88944893 88946077 - Zfp236 protein_coding retained_intron MGP_CBAJ_T0049843.1 MGP_CBAJ_G0024306.1 mouse_genomes_project 18 88997477 89008565 - MGP_CBAJ_P0049843 Zfp236 protein_coding protein_coding MGP_CBAJ_T0048983.1 MGP_CBAJ_G0023992.1 mouse_genomes_project 18 37493826 37512368 - MGP_CBAJ_P0048983 Hars protein_coding protein_coding MGP_CBAJ_T0006910.1 MGP_CBAJ_G0005676.1 mouse_genomes_project 18 31552976 31561758 + Gm26658 lincRNA lincRNA MGP_CBAJ_T0049739.1 MGP_CBAJ_G0024275.1 mouse_genomes_project 18 82551269 82626854 - MGP_CBAJ_P0049739 Katnal2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049740.1 MGP_CBAJ_G0024275.1 mouse_genomes_project 18 82551269 82626811 - MGP_CBAJ_P0049740 Katnal2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049741.1 MGP_CBAJ_G0024275.1 mouse_genomes_project 18 82551277 82626811 - MGP_CBAJ_P0049741 Katnal2 protein_coding protein_coding MGP_CBAJ_T0049742.1 MGP_CBAJ_G0024275.1 mouse_genomes_project 18 82551506 82626792 - MGP_CBAJ_P0049742 Katnal2 protein_coding protein_coding MGP_CBAJ_T0049743.1 MGP_CBAJ_G0024275.1 mouse_genomes_project 18 82552570 82580910 - Katnal2 protein_coding processed_transcript MGP_CBAJ_T0049744.1 MGP_CBAJ_G0024275.1 mouse_genomes_project 18 82567291 82626864 - MGP_CBAJ_P0049744 Katnal2 protein_coding protein_coding MGP_CBAJ_T0049745.1 MGP_CBAJ_G0024275.1 mouse_genomes_project 18 82576564 82582240 - Katnal2 protein_coding retained_intron MGP_CBAJ_T0049746.1 MGP_CBAJ_G0024275.1 mouse_genomes_project 18 82584078 82626855 - MGP_CBAJ_P0049746 Katnal2 protein_coding protein_coding MGP_CBAJ_T0049747.1 MGP_CBAJ_G0024275.1 mouse_genomes_project 18 82584562 82626866 - MGP_CBAJ_P0049747 Katnal2 protein_coding protein_coding MGP_CBAJ_T0049688.1 MGP_CBAJ_G0024260.1 mouse_genomes_project 18 79479630 79494062 + MGP_CBAJ_P0049688 Mbd1 protein_coding protein_coding MGP_CBAJ_T0049689.1 MGP_CBAJ_G0024260.1 mouse_genomes_project 18 79479667 79488932 + MGP_CBAJ_P0049689 Mbd1 protein_coding unknown_likely_coding MGP_CBAJ_T0048874.1 MGP_CBAJ_G0023957.1 mouse_genomes_project 18 35610845 35757401 + MGP_CBAJ_P0048874 Ctnna1 protein_coding protein_coding MGP_CBAJ_T0011334.1 MGP_CBAJ_G0009472.1 mouse_genomes_project 18 58392634 58392919 - Gm24514 misc_RNA misc_RNA MGP_CBAJ_T0049752.1 MGP_CBAJ_G0024278.1 mouse_genomes_project 18 82793307 82874955 + MGP_CBAJ_P0049752 St8sia5 protein_coding protein_coding MGP_CBAJ_T0049753.1 MGP_CBAJ_G0024278.1 mouse_genomes_project 18 82793433 82874825 + MGP_CBAJ_P0049753 St8sia5 protein_coding protein_coding MGP_CBAJ_T0049175.1 MGP_CBAJ_G0024081.1 mouse_genomes_project 18 43524219 43598301 - MGP_CBAJ_P0049175 Lars protein_coding protein_coding MGP_CBAJ_T0011339.1 MGP_CBAJ_G0009477.1 mouse_genomes_project 18 78747541 78747648 + Gm26438 misc_RNA misc_RNA MGP_CBAJ_T0048803.1 MGP_CBAJ_G0023933.1 mouse_genomes_project 18 33212679 33460787 + MGP_CBAJ_P0048803 Camk4 protein_coding protein_coding MGP_CBAJ_T0048866.1 MGP_CBAJ_G0023954.1 mouse_genomes_project 18 35306565 35315486 + MGP_CBAJ_P0048866 Egr1 protein_coding protein_coding MGP_CBAJ_T0048867.1 MGP_CBAJ_G0023954.1 mouse_genomes_project 18 35307947 35315458 + MGP_CBAJ_P0048867 Egr1 protein_coding protein_coding MGP_CBAJ_T0048949.1 MGP_CBAJ_G0023980.1 mouse_genomes_project 18 37225801 37238931 + MGP_CBAJ_P0048949 Slc4a9 protein_coding protein_coding MGP_CBAJ_T0048950.1 MGP_CBAJ_G0023980.1 mouse_genomes_project 18 37225801 37238931 + MGP_CBAJ_P0048950 Slc4a9 protein_coding protein_coding MGP_CBAJ_T0049553.1 MGP_CBAJ_G0024230.1 mouse_genomes_project 18 71972008 72046205 - MGP_CBAJ_P0049553 Spire1 protein_coding protein_coding MGP_CBAJ_T0049554.1 MGP_CBAJ_G0024230.1 mouse_genomes_project 18 71972008 72042746 - MGP_CBAJ_P0049554 Spire1 protein_coding protein_coding MGP_CBAJ_T0049555.1 MGP_CBAJ_G0024230.1 mouse_genomes_project 18 71972012 72046261 - MGP_CBAJ_P0049555 Spire1 protein_coding protein_coding MGP_CBAJ_T0049556.1 MGP_CBAJ_G0024230.1 mouse_genomes_project 18 71979745 72110451 - MGP_CBAJ_P0049556 Spire1 protein_coding unknown_likely_coding MGP_CBAJ_T0048592.1 MGP_CBAJ_G0023846.1 mouse_genomes_project 18 7451425 7585248 - MGP_CBAJ_P0048592 Rock1 protein_coding protein_coding MGP_CBAJ_T0000979.1 MGP_CBAJ_G0000911.1 mouse_genomes_project 18 90787983 90791461 - TEC TEC MGP_CBAJ_T0049369.1 MGP_CBAJ_G0024167.1 mouse_genomes_project 18 64041356 64053418 + MGP_CBAJ_P0049369 Rbm22 protein_coding protein_coding MGP_CBAJ_T0049370.1 MGP_CBAJ_G0024167.1 mouse_genomes_project 18 64041384 64042107 + Rbm22 protein_coding retained_intron MGP_CBAJ_T0049371.1 MGP_CBAJ_G0024167.1 mouse_genomes_project 18 64041388 64050907 + Rbm22 protein_coding retained_intron MGP_CBAJ_T0049372.1 MGP_CBAJ_G0024167.1 mouse_genomes_project 18 64051029 64051754 + Rbm22 protein_coding retained_intron MGP_CBAJ_T0049373.1 MGP_CBAJ_G0024167.1 mouse_genomes_project 18 64051212 64052600 + Rbm22 protein_coding retained_intron MGP_CBAJ_T0013164.1 MGP_CBAJ_G0011276.1 mouse_genomes_project 18 40369889 40370240 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0048979.1 MGP_CBAJ_G0023990.1 mouse_genomes_project 18 37487536 37491012 + MGP_CBAJ_P0048979 Wdr55 protein_coding protein_coding MGP_CBAJ_T0048626.1 MGP_CBAJ_G0023858.1 mouse_genomes_project 18 9960531 10009540 - MGP_CBAJ_P0048626 Npc1 protein_coding protein_coding MGP_CBAJ_T0048627.1 MGP_CBAJ_G0023858.1 mouse_genomes_project 18 9981213 9983384 - Npc1 protein_coding processed_transcript MGP_CBAJ_T0048628.1 MGP_CBAJ_G0023858.1 mouse_genomes_project 18 9988400 10009498 - Npc1 protein_coding retained_intron MGP_CBAJ_T0048629.1 MGP_CBAJ_G0023858.1 mouse_genomes_project 18 9988821 10009466 - Npc1 protein_coding retained_intron MGP_CBAJ_T0048630.1 MGP_CBAJ_G0023858.1 mouse_genomes_project 18 9992671 9994927 - Npc1 protein_coding processed_transcript MGP_CBAJ_T0013153.1 MGP_CBAJ_G0011265.1 mouse_genomes_project 18 30451497 30455211 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0049005.1 MGP_CBAJ_G0024003.1 mouse_genomes_project 18 37719560 37945878 + MGP_CBAJ_P0049005 Pcdha7 protein_coding protein_coding MGP_CBAJ_T0017389.1 MGP_CBAJ_G0015110.1 mouse_genomes_project 18 71774620 71800397 - B430212C06Rik processed_transcript processed_transcript MGP_CBAJ_T0017390.1 MGP_CBAJ_G0015110.1 mouse_genomes_project 18 71774620 71784404 - B430212C06Rik processed_transcript processed_transcript MGP_CBAJ_T0017391.1 MGP_CBAJ_G0015110.1 mouse_genomes_project 18 71774800 71799877 - B430212C06Rik processed_transcript processed_transcript MGP_CBAJ_T0017392.1 MGP_CBAJ_G0015110.1 mouse_genomes_project 18 71776429 71784583 - B430212C06Rik processed_transcript retained_intron MGP_CBAJ_T0017393.1 MGP_CBAJ_G0015110.1 mouse_genomes_project 18 71776442 71784643 - B430212C06Rik processed_transcript processed_transcript MGP_CBAJ_T0010138.1 MGP_CBAJ_G0008276.1 mouse_genomes_project 18 64471692 64471760 + Mir6982 miRNA miRNA MGP_CBAJ_T0049217.1 MGP_CBAJ_G0024104.1 mouse_genomes_project 18 45881230 46307045 - MGP_CBAJ_P0049217 Mcc protein_coding protein_coding MGP_CBAJ_T0049218.1 MGP_CBAJ_G0024104.1 mouse_genomes_project 18 45887348 46146420 - MGP_CBAJ_P0049218 Mcc protein_coding protein_coding MGP_CBAJ_T0049219.1 MGP_CBAJ_G0024104.1 mouse_genomes_project 18 45980683 45983347 - Mcc protein_coding retained_intron MGP_CBAJ_T0049220.1 MGP_CBAJ_G0024104.1 mouse_genomes_project 18 46142720 46146438 - Mcc protein_coding retained_intron MGP_CBAJ_T0049221.1 MGP_CBAJ_G0024104.1 mouse_genomes_project 18 46195482 46212002 - Mcc protein_coding processed_transcript MGP_CBAJ_T0048868.1 MGP_CBAJ_G0023955.1 mouse_genomes_project 18 35364776 35395625 - MGP_CBAJ_P0048868 Etf1 protein_coding protein_coding MGP_CBAJ_T0048869.1 MGP_CBAJ_G0023955.1 mouse_genomes_project 18 35395451 35395559 - MGP_CBAJ_P0048869 Etf1 protein_coding protein_coding MGP_CBAJ_T0049128.1 MGP_CBAJ_G0024067.1 mouse_genomes_project 18 39318911 39364381 + MGP_CBAJ_P0049128 Ndfip1 protein_coding protein_coding MGP_CBAJ_T0049538.1 MGP_CBAJ_G0024220.1 mouse_genomes_project 18 70255645 70548029 - Ccbe1 protein_coding processed_transcript MGP_CBAJ_T0049539.1 MGP_CBAJ_G0024220.1 mouse_genomes_project 18 70268077 70548371 - MGP_CBAJ_P0049539 Ccbe1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049540.1 MGP_CBAJ_G0024220.1 mouse_genomes_project 18 70272182 70548421 - MGP_CBAJ_P0049540 Ccbe1 protein_coding protein_coding MGP_CBAJ_T0049541.1 MGP_CBAJ_G0024220.1 mouse_genomes_project 18 70521059 70561294 - Ccbe1 protein_coding processed_transcript MGP_CBAJ_T0010148.1 MGP_CBAJ_G0008286.1 mouse_genomes_project 18 73660258 73660333 - Mir145b miRNA miRNA MGP_CBAJ_T0100289.1 MGP_CBAJ_G0038544.1 mouse_genomes_project 18 38515068 38515159 + Gm24401 snoRNA snoRNA MGP_CBAJ_T0049075.1 MGP_CBAJ_G0024055.1 mouse_genomes_project 18 38638545 38667943 + MGP_CBAJ_P0049075 Pcdhga8 protein_coding protein_coding MGP_CBAJ_T0049076.1 MGP_CBAJ_G0024055.1 mouse_genomes_project 18 38638867 38667943 + MGP_CBAJ_P0049076 Pcdhga8 protein_coding protein_coding MGP_CBAJ_T0049077.1 MGP_CBAJ_G0024055.1 mouse_genomes_project 18 38638922 38642022 + Pcdhga8 protein_coding retained_intron MGP_CBAJ_T0048604.1 MGP_CBAJ_G0023851.1 mouse_genomes_project 18 8181416 8276516 + MGP_CBAJ_P0048604 Mib1 protein_coding protein_coding MGP_CBAJ_T0048605.1 MGP_CBAJ_G0023851.1 mouse_genomes_project 18 8181523 8270115 + MGP_CBAJ_P0048605 Mib1 protein_coding protein_coding MGP_CBAJ_T0048606.1 MGP_CBAJ_G0023851.1 mouse_genomes_project 18 8181612 8211810 + Mib1 protein_coding retained_intron MGP_CBAJ_T0048607.1 MGP_CBAJ_G0023851.1 mouse_genomes_project 18 8218752 8276642 + MGP_CBAJ_P0048607 Mib1 protein_coding protein_coding MGP_CBAJ_T0048608.1 MGP_CBAJ_G0023851.1 mouse_genomes_project 18 8256300 8275566 + MGP_CBAJ_P0048608 Mib1 protein_coding protein_coding MGP_CBAJ_T0049243.1 MGP_CBAJ_G0024113.1 mouse_genomes_project 18 48281537 48294124 + MGP_CBAJ_P0049243 protein_coding protein_coding MGP_CBAJ_T0097992.1 MGP_CBAJ_G0036265.1 mouse_genomes_project 18 10399766 10399880 - Gm22340 rRNA rRNA MGP_CBAJ_T0099022.1 MGP_CBAJ_G0037277.1 mouse_genomes_project 18 4979031 4979138 + Gm24292 snRNA snRNA MGP_CBAJ_T0049057.1 MGP_CBAJ_G0024044.1 mouse_genomes_project 18 38523781 38667943 + MGP_CBAJ_P0049057 Pcdhga7 protein_coding protein_coding MGP_CBAJ_T0049058.1 MGP_CBAJ_G0024044.1 mouse_genomes_project 18 38523835 38526879 + MGP_CBAJ_P0049058 Pcdhga7 protein_coding protein_coding MGP_CBAJ_T0010120.1 MGP_CBAJ_G0008258.1 mouse_genomes_project 18 33136828 33136929 - Mir6361 miRNA miRNA MGP_CBAJ_T0049351.1 MGP_CBAJ_G0024156.1 mouse_genomes_project 18 61806928 61881401 + MGP_CBAJ_P0049351 Slc27a6 protein_coding protein_coding MGP_CBAJ_T0049270.1 MGP_CBAJ_G0024123.1 mouse_genomes_project 18 52108731 52237475 + MGP_CBAJ_P0049270 Tnfaip8 protein_coding protein_coding MGP_CBAJ_T0049271.1 MGP_CBAJ_G0024123.1 mouse_genomes_project 18 52108795 52186386 + Tnfaip8 protein_coding processed_transcript MGP_CBAJ_T0049272.1 MGP_CBAJ_G0024123.1 mouse_genomes_project 18 52108833 52239703 + MGP_CBAJ_P0049272 Tnfaip8 protein_coding protein_coding MGP_CBAJ_T0049273.1 MGP_CBAJ_G0024123.1 mouse_genomes_project 18 52108839 52255409 + Tnfaip8 protein_coding processed_transcript MGP_CBAJ_T0049274.1 MGP_CBAJ_G0024123.1 mouse_genomes_project 18 52152428 52237268 + MGP_CBAJ_P0049274 Tnfaip8 protein_coding protein_coding MGP_CBAJ_T0049275.1 MGP_CBAJ_G0024123.1 mouse_genomes_project 18 52163910 52237325 + MGP_CBAJ_P0049275 Tnfaip8 protein_coding protein_coding MGP_CBAJ_T0049276.1 MGP_CBAJ_G0024123.1 mouse_genomes_project 18 52163920 52181542 + Tnfaip8 protein_coding processed_transcript MGP_CBAJ_T0049277.1 MGP_CBAJ_G0024123.1 mouse_genomes_project 18 52163921 52237160 + MGP_CBAJ_P0049277 Tnfaip8 protein_coding protein_coding MGP_CBAJ_T0049278.1 MGP_CBAJ_G0024123.1 mouse_genomes_project 18 52181854 52182223 + MGP_CBAJ_P0049278 Tnfaip8 protein_coding protein_coding MGP_CBAJ_T0049279.1 MGP_CBAJ_G0024123.1 mouse_genomes_project 18 52186775 52188502 + Tnfaip8 protein_coding retained_intron MGP_CBAJ_T0049280.1 MGP_CBAJ_G0024123.1 mouse_genomes_project 18 52186783 52236831 + MGP_CBAJ_P0049280 Tnfaip8 protein_coding protein_coding MGP_CBAJ_T0049281.1 MGP_CBAJ_G0024123.1 mouse_genomes_project 18 52186786 52236944 + MGP_CBAJ_P0049281 Tnfaip8 protein_coding protein_coding MGP_CBAJ_T0049282.1 MGP_CBAJ_G0024123.1 mouse_genomes_project 18 52188368 52238256 + MGP_CBAJ_P0049282 Tnfaip8 protein_coding protein_coding MGP_CBAJ_T0049824.1 MGP_CBAJ_G0024305.1 mouse_genomes_project 18 88750574 88848573 + MGP_CBAJ_P0049824 Mbp protein_coding protein_coding MGP_CBAJ_T0049825.1 MGP_CBAJ_G0024305.1 mouse_genomes_project 18 88750576 88793840 + MGP_CBAJ_P0049825 Mbp protein_coding protein_coding MGP_CBAJ_T0049826.1 MGP_CBAJ_G0024305.1 mouse_genomes_project 18 88750590 88875395 + MGP_CBAJ_P0049826 Mbp protein_coding protein_coding MGP_CBAJ_T0049827.1 MGP_CBAJ_G0024305.1 mouse_genomes_project 18 88750764 88875394 + MGP_CBAJ_P0049827 Mbp protein_coding protein_coding MGP_CBAJ_T0049828.1 MGP_CBAJ_G0024305.1 mouse_genomes_project 18 88750798 88873975 + MGP_CBAJ_P0049828 Mbp protein_coding nonsense_mediated_decay MGP_CBAJ_T0049829.1 MGP_CBAJ_G0024305.1 mouse_genomes_project 18 88844332 88875395 + MGP_CBAJ_P0049829 Mbp protein_coding protein_coding MGP_CBAJ_T0049830.1 MGP_CBAJ_G0024305.1 mouse_genomes_project 18 88844332 88875395 + MGP_CBAJ_P0049830 Mbp protein_coding protein_coding MGP_CBAJ_T0049831.1 MGP_CBAJ_G0024305.1 mouse_genomes_project 18 88844339 88875385 + MGP_CBAJ_P0049831 Mbp protein_coding protein_coding MGP_CBAJ_T0049832.1 MGP_CBAJ_G0024305.1 mouse_genomes_project 18 88844377 88875395 + MGP_CBAJ_P0049832 Mbp protein_coding protein_coding MGP_CBAJ_T0049833.1 MGP_CBAJ_G0024305.1 mouse_genomes_project 18 88844399 88873914 + MGP_CBAJ_P0049833 Mbp protein_coding protein_coding MGP_CBAJ_T0049834.1 MGP_CBAJ_G0024305.1 mouse_genomes_project 18 88844415 88875395 + MGP_CBAJ_P0049834 Mbp protein_coding protein_coding MGP_CBAJ_T0049835.1 MGP_CBAJ_G0024305.1 mouse_genomes_project 18 88844452 88875384 + MGP_CBAJ_P0049835 Mbp protein_coding protein_coding MGP_CBAJ_T0049836.1 MGP_CBAJ_G0024305.1 mouse_genomes_project 18 88853015 88874045 + Mbp protein_coding processed_transcript MGP_CBAJ_T0049002.1 MGP_CBAJ_G0024001.1 mouse_genomes_project 18 37710532 37945878 + MGP_CBAJ_P0049002 Pcdha6 protein_coding protein_coding MGP_CBAJ_T0049003.1 MGP_CBAJ_G0024001.1 mouse_genomes_project 18 37710549 37945609 + MGP_CBAJ_P0049003 Pcdha6 protein_coding protein_coding MGP_CBAJ_T0010116.1 MGP_CBAJ_G0008254.1 mouse_genomes_project 18 8243420 8243492 - Mir1a-2 miRNA miRNA MGP_CBAJ_T0017359.1 MGP_CBAJ_G0015101.1 mouse_genomes_project 18 37918062 37936724 - Gm10544 processed_transcript antisense MGP_CBAJ_T0017360.1 MGP_CBAJ_G0015101.1 mouse_genomes_project 18 37933802 37936708 - Gm10544 processed_transcript antisense MGP_CBAJ_T0017361.1 MGP_CBAJ_G0015101.1 mouse_genomes_project 18 37934963 37936716 - Gm10544 processed_transcript retained_intron MGP_CBAJ_T0049120.1 MGP_CBAJ_G0024064.1 mouse_genomes_project 18 39135954 39146525 - Pcdh12 protein_coding retained_intron MGP_CBAJ_T0049121.1 MGP_CBAJ_G0024064.1 mouse_genomes_project 18 39137690 39152635 - MGP_CBAJ_P0049121 Pcdh12 protein_coding protein_coding MGP_CBAJ_T0049122.1 MGP_CBAJ_G0024064.1 mouse_genomes_project 18 39149319 39152964 - Pcdh12 protein_coding retained_intron MGP_CBAJ_T0100286.1 MGP_CBAJ_G0038541.1 mouse_genomes_project 18 35408536 35408606 - Gm26109 snoRNA snoRNA MGP_CBAJ_T0013188.1 MGP_CBAJ_G0011300.1 mouse_genomes_project 18 97404132 97404469 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017397.1 MGP_CBAJ_G0015113.1 mouse_genomes_project 18 91190482 91192254 - D030046N08Rik processed_transcript processed_transcript MGP_CBAJ_T0049844.1 MGP_CBAJ_G0024307.1 mouse_genomes_project 18 89258758 89359751 + MGP_CBAJ_P0049844 Zfp516 protein_coding protein_coding MGP_CBAJ_T0049845.1 MGP_CBAJ_G0024307.1 mouse_genomes_project 18 89264619 89359751 + MGP_CBAJ_P0049845 Zfp516 protein_coding protein_coding MGP_CBAJ_T0049233.1 MGP_CBAJ_G0024107.1 mouse_genomes_project 18 47779478 47816630 - MGP_CBAJ_P0049233 Trim36 protein_coding protein_coding MGP_CBAJ_T0049234.1 MGP_CBAJ_G0024107.1 mouse_genomes_project 18 47779478 47831647 - MGP_CBAJ_P0049234 Trim36 protein_coding protein_coding MGP_CBAJ_T0049800.1 MGP_CBAJ_G0024298.1 mouse_genomes_project 18 86290410 86336009 + MGP_CBAJ_P0049800 Pqlc1 protein_coding protein_coding MGP_CBAJ_T0049801.1 MGP_CBAJ_G0024298.1 mouse_genomes_project 18 86290460 86326757 + MGP_CBAJ_P0049801 Pqlc1 protein_coding protein_coding MGP_CBAJ_T0049802.1 MGP_CBAJ_G0024298.1 mouse_genomes_project 18 86292363 86336097 + MGP_CBAJ_P0049802 Pqlc1 protein_coding protein_coding MGP_CBAJ_T0049803.1 MGP_CBAJ_G0024298.1 mouse_genomes_project 18 86292954 86327443 + MGP_CBAJ_P0049803 Pqlc1 protein_coding protein_coding MGP_CBAJ_T0049804.1 MGP_CBAJ_G0024298.1 mouse_genomes_project 18 86293402 86336088 + MGP_CBAJ_P0049804 Pqlc1 protein_coding protein_coding MGP_CBAJ_T0049805.1 MGP_CBAJ_G0024298.1 mouse_genomes_project 18 86293406 86318527 + Pqlc1 protein_coding retained_intron MGP_CBAJ_T0049806.1 MGP_CBAJ_G0024298.1 mouse_genomes_project 18 86293424 86336096 + MGP_CBAJ_P0049806 Pqlc1 protein_coding protein_coding MGP_CBAJ_T0049807.1 MGP_CBAJ_G0024298.1 mouse_genomes_project 18 86293425 86316707 + Pqlc1 protein_coding retained_intron MGP_CBAJ_T0049808.1 MGP_CBAJ_G0024298.1 mouse_genomes_project 18 86293425 86336086 + MGP_CBAJ_P0049808 Pqlc1 protein_coding protein_coding MGP_CBAJ_T0049809.1 MGP_CBAJ_G0024298.1 mouse_genomes_project 18 86293436 86336084 + MGP_CBAJ_P0049809 Pqlc1 protein_coding protein_coding MGP_CBAJ_T0049810.1 MGP_CBAJ_G0024298.1 mouse_genomes_project 18 86301759 86302405 + Pqlc1 protein_coding processed_transcript MGP_CBAJ_T0049881.1 MGP_CBAJ_G0024320.1 mouse_genomes_project 18 95914768 96094349 + MGP_CBAJ_P0049881 Rttn protein_coding protein_coding MGP_CBAJ_T0049489.1 MGP_CBAJ_G0024207.1 mouse_genomes_project 18 68388318 68420669 - MGP_CBAJ_P0049489 Fech protein_coding protein_coding MGP_CBAJ_T0101067.1 MGP_CBAJ_G0039285.1 mouse_genomes_project 18 34556216 34569786 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101068.1 MGP_CBAJ_G0039285.1 mouse_genomes_project 18 34558228 34558500 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0049557.1 MGP_CBAJ_G0024231.1 mouse_genomes_project 18 72119194 72143111 - MGP_CBAJ_P0049557 Cep76 protein_coding protein_coding MGP_CBAJ_T0013148.1 MGP_CBAJ_G0011260.1 mouse_genomes_project 18 20098080 20098524 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006911.1 MGP_CBAJ_G0005677.1 mouse_genomes_project 18 31918079 31929173 - Gm26533 lincRNA lincRNA MGP_CBAJ_T0010127.1 MGP_CBAJ_G0008265.1 mouse_genomes_project 18 38826409 38826468 - Mir6980 miRNA miRNA MGP_CBAJ_T0006946.1 MGP_CBAJ_G0005704.1 mouse_genomes_project 18 81219528 81220797 + 1700034B16Rik lincRNA lincRNA MGP_CBAJ_T0048613.1 MGP_CBAJ_G0023855.1 mouse_genomes_project 18 9729223 9883609 - MGP_CBAJ_P0048613 Tmem241 protein_coding protein_coding MGP_CBAJ_T0048614.1 MGP_CBAJ_G0023855.1 mouse_genomes_project 18 9731450 9883581 - MGP_CBAJ_P0048614 Tmem241 protein_coding protein_coding MGP_CBAJ_T0048615.1 MGP_CBAJ_G0023855.1 mouse_genomes_project 18 9819935 9883609 - MGP_CBAJ_P0048615 Tmem241 protein_coding protein_coding MGP_CBAJ_T0048975.1 MGP_CBAJ_G0023987.1 mouse_genomes_project 18 37459902 37469707 + MGP_CBAJ_P0048975 Tmco6 protein_coding protein_coding MGP_CBAJ_T0049205.1 MGP_CBAJ_G0024096.1 mouse_genomes_project 18 45536893 45541001 + MGP_CBAJ_P0049205 Spink12 protein_coding protein_coding MGP_CBAJ_T0049329.1 MGP_CBAJ_G0024146.1 mouse_genomes_project 18 59534516 59540899 + MGP_CBAJ_P0049329 Tex43 protein_coding protein_coding MGP_CBAJ_T0049330.1 MGP_CBAJ_G0024146.1 mouse_genomes_project 18 59534545 59538846 + MGP_CBAJ_P0049330 Tex43 protein_coding protein_coding MGP_CBAJ_T0049331.1 MGP_CBAJ_G0024146.1 mouse_genomes_project 18 59534555 59540829 + MGP_CBAJ_P0049331 Tex43 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049332.1 MGP_CBAJ_G0024146.1 mouse_genomes_project 18 59534592 59540899 + MGP_CBAJ_P0049332 Tex43 protein_coding protein_coding MGP_CBAJ_T0010110.1 MGP_CBAJ_G0008248.1 mouse_genomes_project 18 3524210 3524293 - Mir1893 miRNA miRNA MGP_CBAJ_T0049335.1 MGP_CBAJ_G0024148.1 mouse_genomes_project 18 59752889 59931488 - MGP_CBAJ_P0049335 March3 protein_coding protein_coding MGP_CBAJ_T0049336.1 MGP_CBAJ_G0024148.1 mouse_genomes_project 18 59767235 59806688 - MGP_CBAJ_P0049336 March3 protein_coding protein_coding MGP_CBAJ_T0049337.1 MGP_CBAJ_G0024148.1 mouse_genomes_project 18 59798016 59931455 - March3 protein_coding retained_intron MGP_CBAJ_T0049102.1 MGP_CBAJ_G0024060.1 mouse_genomes_project 18 38792865 38795903 - Fchsd1 protein_coding retained_intron MGP_CBAJ_T0049103.1 MGP_CBAJ_G0024060.1 mouse_genomes_project 18 38792868 38805206 - MGP_CBAJ_P0049103 Fchsd1 protein_coding protein_coding MGP_CBAJ_T0049104.1 MGP_CBAJ_G0024060.1 mouse_genomes_project 18 38798395 38799493 - Fchsd1 protein_coding retained_intron MGP_CBAJ_T0049105.1 MGP_CBAJ_G0024060.1 mouse_genomes_project 18 38801089 38805201 - MGP_CBAJ_P0049105 Fchsd1 protein_coding protein_coding MGP_CBAJ_T0049106.1 MGP_CBAJ_G0024060.1 mouse_genomes_project 18 38801127 38803181 - Fchsd1 protein_coding retained_intron MGP_CBAJ_T0049107.1 MGP_CBAJ_G0024060.1 mouse_genomes_project 18 38803049 38803484 - Fchsd1 protein_coding retained_intron MGP_CBAJ_T0049108.1 MGP_CBAJ_G0024060.1 mouse_genomes_project 18 38803070 38805201 - MGP_CBAJ_P0049108 Fchsd1 protein_coding protein_coding MGP_CBAJ_T0049109.1 MGP_CBAJ_G0024060.1 mouse_genomes_project 18 38803071 38805189 - Fchsd1 protein_coding retained_intron MGP_CBAJ_T0049110.1 MGP_CBAJ_G0024060.1 mouse_genomes_project 18 38803236 38805201 - MGP_CBAJ_P0049110 Fchsd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049111.1 MGP_CBAJ_G0024060.1 mouse_genomes_project 18 38803264 38804960 - Fchsd1 protein_coding retained_intron MGP_CBAJ_T0049344.1 MGP_CBAJ_G0024152.1 mouse_genomes_project 18 60575221 60584844 + MGP_CBAJ_P0049344 Ctxn3 protein_coding protein_coding MGP_CBAJ_T0100297.1 MGP_CBAJ_G0038552.1 mouse_genomes_project 18 80193605 80193726 - Gm24559 snoRNA snoRNA MGP_CBAJ_T0099025.1 MGP_CBAJ_G0037280.1 mouse_genomes_project 18 19817396 19817545 - Gm24959 snRNA snRNA MGP_CBAJ_T0006916.1 MGP_CBAJ_G0005682.1 mouse_genomes_project 18 33186728 33212861 - 2310026I22Rik lincRNA lincRNA MGP_CBAJ_T0099031.1 MGP_CBAJ_G0037286.1 mouse_genomes_project 18 34532518 34532580 - Gm23411 snRNA snRNA MGP_CBAJ_T0048774.1 MGP_CBAJ_G0023914.1 mouse_genomes_project 18 31706323 31737828 - MGP_CBAJ_P0048774 Slc25a46 protein_coding protein_coding MGP_CBAJ_T0049783.1 MGP_CBAJ_G0024291.1 mouse_genomes_project 18 86048650 86131696 + MGP_CBAJ_P0049783 Pard6g protein_coding protein_coding MGP_CBAJ_T0048991.1 MGP_CBAJ_G0023994.1 mouse_genomes_project 18 37523140 37528826 + MGP_CBAJ_P0048991 Zmat2 protein_coding protein_coding MGP_CBAJ_T0048778.1 MGP_CBAJ_G0023917.1 mouse_genomes_project 18 31894772 31920926 + MGP_CBAJ_P0048778 Ammecr1l protein_coding protein_coding MGP_CBAJ_T0013136.1 MGP_CBAJ_G0011248.1 mouse_genomes_project 18 5085033 5085766 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0048554.1 MGP_CBAJ_G0023833.1 mouse_genomes_project 18 3823853 3848878 + MGP_CBAJ_P0048554 Rab18 protein_coding protein_coding MGP_CBAJ_T0049026.1 MGP_CBAJ_G0024018.1 mouse_genomes_project 18 38120279 38125468 + MGP_CBAJ_P0049026 Pcdhb7 protein_coding protein_coding MGP_CBAJ_T0049033.1 MGP_CBAJ_G0024024.1 mouse_genomes_project 18 38224568 38228278 + MGP_CBAJ_P0049033 Pcdhb13 protein_coding protein_coding MGP_CBAJ_T0000970.1 MGP_CBAJ_G0000902.1 mouse_genomes_project 18 47727394 47727997 - TEC TEC MGP_CBAJ_T0049366.1 MGP_CBAJ_G0024165.1 mouse_genomes_project 18 63959467 63987004 - MGP_CBAJ_P0049366 Smim3 protein_coding protein_coding MGP_CBAJ_T0010131.1 MGP_CBAJ_G0008269.1 mouse_genomes_project 18 59127049 59127234 + Gm25476 miRNA miRNA MGP_CBAJ_T0048822.1 MGP_CBAJ_G0023939.1 mouse_genomes_project 18 34696621 34702122 + Srp19 protein_coding processed_transcript MGP_CBAJ_T0048823.1 MGP_CBAJ_G0023939.1 mouse_genomes_project 18 34696897 34702298 + Srp19 protein_coding processed_transcript MGP_CBAJ_T0048824.1 MGP_CBAJ_G0023939.1 mouse_genomes_project 18 34696919 34702328 + Srp19 protein_coding retained_intron MGP_CBAJ_T0048825.1 MGP_CBAJ_G0023939.1 mouse_genomes_project 18 34696919 34702376 + MGP_CBAJ_P0048825 Srp19 protein_coding protein_coding MGP_CBAJ_T0048826.1 MGP_CBAJ_G0023939.1 mouse_genomes_project 18 34696932 34702198 + MGP_CBAJ_P0048826 Srp19 protein_coding protein_coding MGP_CBAJ_T0048827.1 MGP_CBAJ_G0023939.1 mouse_genomes_project 18 34696950 34702330 + MGP_CBAJ_P0048827 Srp19 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049201.1 MGP_CBAJ_G0024093.1 mouse_genomes_project 18 45391341 45449769 + MGP_CBAJ_P0049201 Spink5 protein_coding protein_coding MGP_CBAJ_T0049546.1 MGP_CBAJ_G0024224.1 mouse_genomes_project 18 71659668 71685227 - MGP_CBAJ_P0049546 Mppe1 protein_coding unknown_likely_coding MGP_CBAJ_T0049547.1 MGP_CBAJ_G0024224.1 mouse_genomes_project 18 71660155 71685882 - MGP_CBAJ_P0049547 Mppe1 protein_coding protein_coding MGP_CBAJ_T0049649.1 MGP_CBAJ_G0024247.1 mouse_genomes_project 18 75256924 75292790 + MGP_CBAJ_P0049649 Stard6 protein_coding protein_coding MGP_CBAJ_T0049650.1 MGP_CBAJ_G0024247.1 mouse_genomes_project 18 75257042 75292535 + MGP_CBAJ_P0049650 Stard6 protein_coding protein_coding MGP_CBAJ_T0049651.1 MGP_CBAJ_G0024247.1 mouse_genomes_project 18 75257098 75292543 + MGP_CBAJ_P0049651 Stard6 protein_coding protein_coding MGP_CBAJ_T0049652.1 MGP_CBAJ_G0024247.1 mouse_genomes_project 18 75257136 75292539 + MGP_CBAJ_P0049652 Stard6 protein_coding protein_coding MGP_CBAJ_T0049653.1 MGP_CBAJ_G0024247.1 mouse_genomes_project 18 75257487 75270451 + MGP_CBAJ_P0049653 Stard6 protein_coding protein_coding MGP_CBAJ_T0049654.1 MGP_CBAJ_G0024247.1 mouse_genomes_project 18 75257670 75290362 + MGP_CBAJ_P0049654 Stard6 protein_coding protein_coding MGP_CBAJ_T0097994.1 MGP_CBAJ_G0036267.1 mouse_genomes_project 18 24004314 24004429 - n-R5s23 rRNA rRNA MGP_CBAJ_T0099028.1 MGP_CBAJ_G0037283.1 mouse_genomes_project 18 33067681 33067788 + Gm26378 snRNA snRNA MGP_CBAJ_T0049563.1 MGP_CBAJ_G0024234.1 mouse_genomes_project 18 72294379 72315027 + MGP_CBAJ_P0049563 Seh1l protein_coding protein_coding MGP_CBAJ_T0049564.1 MGP_CBAJ_G0024234.1 mouse_genomes_project 18 72294513 72315055 + MGP_CBAJ_P0049564 Seh1l protein_coding unknown_likely_coding MGP_CBAJ_T0099055.1 MGP_CBAJ_G0037310.1 mouse_genomes_project 18 89704001 89704167 - Gm24720 snRNA snRNA MGP_CBAJ_T0011328.1 MGP_CBAJ_G0009466.1 mouse_genomes_project 18 39525038 39525109 + Gm27369 misc_RNA misc_RNA MGP_CBAJ_T0048560.1 MGP_CBAJ_G0023835.1 mouse_genomes_project 18 4150151 4370659 - MGP_CBAJ_P0048560 Armc4 protein_coding protein_coding MGP_CBAJ_T0048561.1 MGP_CBAJ_G0023835.1 mouse_genomes_project 18 4184952 4370697 - MGP_CBAJ_P0048561 Armc4 protein_coding unknown_likely_coding MGP_CBAJ_T0017395.1 MGP_CBAJ_G0015112.1 mouse_genomes_project 18 83532109 83535594 - F830208F22Rik processed_transcript processed_transcript MGP_CBAJ_T0017396.1 MGP_CBAJ_G0015112.1 mouse_genomes_project 18 83532109 83535241 - F830208F22Rik processed_transcript processed_transcript MGP_CBAJ_T0048681.1 MGP_CBAJ_G0023877.1 mouse_genomes_project 18 18888172 18925197 - MGP_CBAJ_P0048681 Dsc1 protein_coding protein_coding MGP_CBAJ_T0049643.1 MGP_CBAJ_G0024244.1 mouse_genomes_project 18 74721798 74893613 - MGP_CBAJ_P0049643 Rab27b protein_coding protein_coding MGP_CBAJ_T0049644.1 MGP_CBAJ_G0024244.1 mouse_genomes_project 18 74726319 74796902 - MGP_CBAJ_P0049644 Rab27b protein_coding protein_coding MGP_CBAJ_T0049645.1 MGP_CBAJ_G0024244.1 mouse_genomes_project 18 74726319 74796902 - MGP_CBAJ_P0049645 Rab27b protein_coding protein_coding MGP_CBAJ_T0049646.1 MGP_CBAJ_G0024244.1 mouse_genomes_project 18 74890171 74893582 - Rab27b protein_coding retained_intron MGP_CBAJ_T0097792.1 MGP_CBAJ_G0036065.1 mouse_genomes_project 18 63904504 63905147 + pseudogene pseudogene MGP_CBAJ_T0048617.1 MGP_CBAJ_G0023857.1 mouse_genomes_project 18 9939481 9951980 + 3110002H16Rik protein_coding retained_intron MGP_CBAJ_T0048618.1 MGP_CBAJ_G0023857.1 mouse_genomes_project 18 9939481 9960834 + MGP_CBAJ_P0048618 3110002H16Rik protein_coding protein_coding MGP_CBAJ_T0048619.1 MGP_CBAJ_G0023857.1 mouse_genomes_project 18 9939503 9951435 + 3110002H16Rik protein_coding retained_intron MGP_CBAJ_T0048620.1 MGP_CBAJ_G0023857.1 mouse_genomes_project 18 9939516 9960811 + 3110002H16Rik protein_coding retained_intron MGP_CBAJ_T0048621.1 MGP_CBAJ_G0023857.1 mouse_genomes_project 18 9950433 9955780 + MGP_CBAJ_P0048621 3110002H16Rik protein_coding protein_coding MGP_CBAJ_T0048622.1 MGP_CBAJ_G0023857.1 mouse_genomes_project 18 9951388 9959058 + MGP_CBAJ_P0048622 3110002H16Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0048623.1 MGP_CBAJ_G0023857.1 mouse_genomes_project 18 9956279 9960811 + 3110002H16Rik protein_coding retained_intron MGP_CBAJ_T0048624.1 MGP_CBAJ_G0023857.1 mouse_genomes_project 18 9956503 9960768 + 3110002H16Rik protein_coding retained_intron MGP_CBAJ_T0048625.1 MGP_CBAJ_G0023857.1 mouse_genomes_project 18 9959830 9960811 + 3110002H16Rik protein_coding retained_intron MGP_CBAJ_T0049041.1 MGP_CBAJ_G0024032.1 mouse_genomes_project 18 38300454 38305159 + MGP_CBAJ_P0049041 Pcdhb21 protein_coding protein_coding MGP_CBAJ_T0010117.1 MGP_CBAJ_G0008255.1 mouse_genomes_project 18 9578827 9578905 - Mir1901 miRNA miRNA MGP_CBAJ_T0049849.1 MGP_CBAJ_G0024310.1 mouse_genomes_project 18 90519776 90992920 - MGP_CBAJ_P0049849 Zfp407 protein_coding protein_coding MGP_CBAJ_T0049850.1 MGP_CBAJ_G0024310.1 mouse_genomes_project 18 90609727 91036145 - MGP_CBAJ_P0049850 Zfp407 protein_coding protein_coding MGP_CBAJ_T0049851.1 MGP_CBAJ_G0024310.1 mouse_genomes_project 18 90692103 90831573 - Zfp407 protein_coding processed_transcript MGP_CBAJ_T0049852.1 MGP_CBAJ_G0024310.1 mouse_genomes_project 18 90849151 90854100 - Zfp407 protein_coding retained_intron MGP_CBAJ_T0049853.1 MGP_CBAJ_G0024310.1 mouse_genomes_project 18 90921851 90992870 - Zfp407 protein_coding processed_transcript MGP_CBAJ_T0049854.1 MGP_CBAJ_G0024310.1 mouse_genomes_project 18 90987406 91036366 - Zfp407 protein_coding processed_transcript MGP_CBAJ_T0049817.1 MGP_CBAJ_G0024301.1 mouse_genomes_project 18 86661972 86773378 - MGP_CBAJ_P0049817 Nfatc1 protein_coding protein_coding MGP_CBAJ_T0049818.1 MGP_CBAJ_G0024301.1 mouse_genomes_project 18 86661972 86773378 - MGP_CBAJ_P0049818 Nfatc1 protein_coding protein_coding MGP_CBAJ_T0049819.1 MGP_CBAJ_G0024301.1 mouse_genomes_project 18 86661972 86759178 - MGP_CBAJ_P0049819 Nfatc1 protein_coding protein_coding MGP_CBAJ_T0049820.1 MGP_CBAJ_G0024301.1 mouse_genomes_project 18 86703242 86759178 - MGP_CBAJ_P0049820 Nfatc1 protein_coding protein_coding MGP_CBAJ_T0049306.1 MGP_CBAJ_G0024136.1 mouse_genomes_project 18 55694058 55744163 + MGP_CBAJ_P0049306 Snx2 protein_coding protein_coding MGP_CBAJ_T0049869.1 MGP_CBAJ_G0024315.1 mouse_genomes_project 18 91447286 91497589 + MGP_CBAJ_P0049869 Fbxo15 protein_coding protein_coding MGP_CBAJ_T0049871.1 MGP_CBAJ_G0024315.1 mouse_genomes_project 18 91464150 91497589 + MGP_CBAJ_P0049871 Fbxo15 protein_coding unknown_likely_coding MGP_CBAJ_T0013162.1 MGP_CBAJ_G0011274.1 mouse_genomes_project 18 39666952 39667554 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0010129.1 MGP_CBAJ_G0008267.1 mouse_genomes_project 18 43650703 43650766 + Gm22697 miRNA miRNA MGP_CBAJ_T0003741.1 MGP_CBAJ_G0003361.1 mouse_genomes_project 18 39981462 39982020 - Gm15334 antisense antisense MGP_CBAJ_T0049873.1 MGP_CBAJ_G0024318.1 mouse_genomes_project 18 93383366 93390540 + MGP_CBAJ_P0049873 Cbln2 protein_coding protein_coding MGP_CBAJ_T0049874.1 MGP_CBAJ_G0024318.1 mouse_genomes_project 18 93383776 93389846 + MGP_CBAJ_P0049874 Cbln2 protein_coding protein_coding MGP_CBAJ_T0049875.1 MGP_CBAJ_G0024318.1 mouse_genomes_project 18 93384321 93390538 + MGP_CBAJ_P0049875 Cbln2 protein_coding protein_coding MGP_CBAJ_T0049876.1 MGP_CBAJ_G0024318.1 mouse_genomes_project 18 93385304 93390540 + MGP_CBAJ_P0049876 Cbln2 protein_coding protein_coding MGP_CBAJ_T0099024.1 MGP_CBAJ_G0037279.1 mouse_genomes_project 18 9935304 9935423 + Gm25289 snRNA snRNA MGP_CBAJ_T0048741.1 MGP_CBAJ_G0023901.1 mouse_genomes_project 18 23791837 23798730 + MGP_CBAJ_P0048741 2700062C07Rik protein_coding protein_coding MGP_CBAJ_T0048583.1 MGP_CBAJ_G0023843.1 mouse_genomes_project 18 7050102 7050576 - MGP_CBAJ_P0048583 Gm17430 protein_coding protein_coding MGP_CBAJ_T0048851.1 MGP_CBAJ_G0023948.1 mouse_genomes_project 18 35051228 35072338 - MGP_CBAJ_P0048851 Cdc23 protein_coding protein_coding MGP_CBAJ_T0048852.1 MGP_CBAJ_G0023948.1 mouse_genomes_project 18 35051965 35072338 - MGP_CBAJ_P0048852 Cdc23 protein_coding protein_coding MGP_CBAJ_T0048853.1 MGP_CBAJ_G0023948.1 mouse_genomes_project 18 35053953 35054906 - Cdc23 protein_coding retained_intron MGP_CBAJ_T0048854.1 MGP_CBAJ_G0023948.1 mouse_genomes_project 18 35056094 35072321 - Cdc23 protein_coding retained_intron MGP_CBAJ_T0048855.1 MGP_CBAJ_G0023948.1 mouse_genomes_project 18 35056097 35057130 - Cdc23 protein_coding retained_intron MGP_CBAJ_T0048856.1 MGP_CBAJ_G0023948.1 mouse_genomes_project 18 35057096 35057922 - Cdc23 protein_coding retained_intron MGP_CBAJ_T0048857.1 MGP_CBAJ_G0023948.1 mouse_genomes_project 18 35061997 35065930 - Cdc23 protein_coding retained_intron MGP_CBAJ_T0048858.1 MGP_CBAJ_G0023948.1 mouse_genomes_project 18 35067458 35072321 - Cdc23 protein_coding retained_intron MGP_CBAJ_T0048859.1 MGP_CBAJ_G0023948.1 mouse_genomes_project 18 35068307 35072325 - Cdc23 protein_coding retained_intron MGP_CBAJ_T0048668.1 MGP_CBAJ_G0023871.1 mouse_genomes_project 18 13046293 13175924 - MGP_CBAJ_P0048668 Kctd1 protein_coding protein_coding MGP_CBAJ_T0048669.1 MGP_CBAJ_G0023871.1 mouse_genomes_project 18 13046293 13282020 - MGP_CBAJ_P0048669 Kctd1 protein_coding protein_coding MGP_CBAJ_T0049035.1 MGP_CBAJ_G0024026.1 mouse_genomes_project 18 38256055 38258856 + MGP_CBAJ_P0049035 Pcdhb15 protein_coding protein_coding MGP_CBAJ_T0049567.1 MGP_CBAJ_G0024236.1 mouse_genomes_project 18 72474039 72819106 + MGP_CBAJ_P0049567 Ldlrad4 protein_coding protein_coding MGP_CBAJ_T0006905.1 MGP_CBAJ_G0005674.1 mouse_genomes_project 18 15129155 15135532 + Gm15328 lincRNA lincRNA MGP_CBAJ_T0000971.1 MGP_CBAJ_G0000903.1 mouse_genomes_project 18 47816832 47817543 + TEC TEC MGP_CBAJ_T0049570.1 MGP_CBAJ_G0024238.1 mouse_genomes_project 18 72863920 72891791 + MGP_CBAJ_P0049570 Rnmt protein_coding protein_coding MGP_CBAJ_T0049571.1 MGP_CBAJ_G0024238.1 mouse_genomes_project 18 72863957 72872983 + MGP_CBAJ_P0049571 Rnmt protein_coding protein_coding MGP_CBAJ_T0049572.1 MGP_CBAJ_G0024238.1 mouse_genomes_project 18 72863963 72879025 + Rnmt protein_coding retained_intron MGP_CBAJ_T0049573.1 MGP_CBAJ_G0024238.1 mouse_genomes_project 18 72863965 72888845 + MGP_CBAJ_P0049573 Rnmt protein_coding protein_coding MGP_CBAJ_T0049574.1 MGP_CBAJ_G0024238.1 mouse_genomes_project 18 72863987 72875248 + MGP_CBAJ_P0049574 Rnmt protein_coding protein_coding MGP_CBAJ_T0049575.1 MGP_CBAJ_G0024238.1 mouse_genomes_project 18 72868562 72869760 + MGP_CBAJ_P0049575 Rnmt protein_coding protein_coding MGP_CBAJ_T0049576.1 MGP_CBAJ_G0024238.1 mouse_genomes_project 18 72881047 72882801 + Rnmt protein_coding retained_intron MGP_CBAJ_T0049577.1 MGP_CBAJ_G0024238.1 mouse_genomes_project 18 72882553 72891790 + Rnmt protein_coding processed_transcript MGP_CBAJ_T0099023.1 MGP_CBAJ_G0037278.1 mouse_genomes_project 18 7086485 7086588 - Gm23350 snRNA snRNA MGP_CBAJ_T0048549.1 MGP_CBAJ_G0023831.1 mouse_genomes_project 18 3465611 3549498 - MGP_CBAJ_P0048549 Epc1 protein_coding protein_coding MGP_CBAJ_T0048550.1 MGP_CBAJ_G0023831.1 mouse_genomes_project 18 3465613 3524503 - MGP_CBAJ_P0048550 Epc1 protein_coding protein_coding MGP_CBAJ_T0048551.1 MGP_CBAJ_G0023831.1 mouse_genomes_project 18 3469252 3471558 - MGP_CBAJ_P0048551 Epc1 protein_coding protein_coding MGP_CBAJ_T0048552.1 MGP_CBAJ_G0023831.1 mouse_genomes_project 18 3522806 3524503 - MGP_CBAJ_P0048552 Epc1 protein_coding protein_coding MGP_CBAJ_T0048743.1 MGP_CBAJ_G0023903.1 mouse_genomes_project 18 23885906 23920464 - MGP_CBAJ_P0048743 Slc39a6 protein_coding protein_coding MGP_CBAJ_T0048744.1 MGP_CBAJ_G0023903.1 mouse_genomes_project 18 23894167 23920162 - MGP_CBAJ_P0048744 Slc39a6 protein_coding protein_coding MGP_CBAJ_T0048745.1 MGP_CBAJ_G0023903.1 mouse_genomes_project 18 23912981 23916085 - Slc39a6 protein_coding retained_intron MGP_CBAJ_T0048746.1 MGP_CBAJ_G0023903.1 mouse_genomes_project 18 23918131 23919940 - MGP_CBAJ_P0048746 Slc39a6 protein_coding protein_coding MGP_CBAJ_T0049788.1 MGP_CBAJ_G0024296.1 mouse_genomes_project 18 86226905 86246138 + MGP_CBAJ_P0049788 Txnl4a protein_coding protein_coding MGP_CBAJ_T0049792.1 MGP_CBAJ_G0024296.1 mouse_genomes_project 18 86226973 86244821 + MGP_CBAJ_P0049792 Txnl4a protein_coding protein_coding MGP_CBAJ_T0049794.1 MGP_CBAJ_G0024296.1 mouse_genomes_project 18 86227004 86241498 + Txnl4a protein_coding retained_intron MGP_CBAJ_T0101073.1 MGP_CBAJ_G0039288.1 mouse_genomes_project 18 80659913 80671728 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101074.1 MGP_CBAJ_G0039288.1 mouse_genomes_project 18 80660184 80660442 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0101075.1 MGP_CBAJ_G0039288.1 mouse_genomes_project 18 80670087 80671740 - transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0049454.1 MGP_CBAJ_G0024196.1 mouse_genomes_project 18 66298765 66302610 - MGP_CBAJ_P0049454 Spink7 protein_coding protein_coding MGP_CBAJ_T0048833.1 MGP_CBAJ_G0023944.1 mouse_genomes_project 18 34975873 34993159 - MGP_CBAJ_P0048833 Nme5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048834.1 MGP_CBAJ_G0023944.1 mouse_genomes_project 18 34975875 34993174 - MGP_CBAJ_P0048834 Nme5 protein_coding protein_coding MGP_CBAJ_T0048835.1 MGP_CBAJ_G0023944.1 mouse_genomes_project 18 34975923 34993146 - MGP_CBAJ_P0048835 Nme5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0048836.1 MGP_CBAJ_G0023944.1 mouse_genomes_project 18 34980624 34993142 - MGP_CBAJ_P0048836 Nme5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0098001.1 MGP_CBAJ_G0036274.1 mouse_genomes_project 18 74253268 74253377 + Gm24845 rRNA rRNA MGP_CBAJ_T0099050.1 MGP_CBAJ_G0037305.1 mouse_genomes_project 18 71605726 71605819 - Gm23512 snRNA snRNA MGP_CBAJ_T0010130.1 MGP_CBAJ_G0008268.1 mouse_genomes_project 18 58806604 58806693 - Gm23335 miRNA miRNA MGP_CBAJ_T0049451.1 MGP_CBAJ_G0024193.1 mouse_genomes_project 18 65855536 65859821 + MGP_CBAJ_P0049451 Gm9949 protein_coding protein_coding MGP_CBAJ_T0100294.1 MGP_CBAJ_G0038549.1 mouse_genomes_project 18 61886454 61886585 - Gm23270 snoRNA snoRNA MGP_CBAJ_T0049440.1 MGP_CBAJ_G0024187.1 mouse_genomes_project 18 65322893 65336615 - MGP_CBAJ_P0049440 Pcyox1l protein_coding protein_coding MGP_CBAJ_T0049441.1 MGP_CBAJ_G0024187.1 mouse_genomes_project 18 65325533 65336593 - MGP_CBAJ_P0049441 Pcyox1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0049442.1 MGP_CBAJ_G0024187.1 mouse_genomes_project 18 65331874 65336615 - Pcyox1l protein_coding retained_intron MGP_CBAJ_T0049017.1 MGP_CBAJ_G0024011.1 mouse_genomes_project 18 37901744 37945878 + MGP_CBAJ_P0049017 Pcdhac2 protein_coding protein_coding MGP_CBAJ_T0049299.1 MGP_CBAJ_G0024135.1 mouse_genomes_project 18 55243847 55316422 + MGP_CBAJ_P0049299 Sncaip protein_coding protein_coding MGP_CBAJ_T0049300.1 MGP_CBAJ_G0024135.1 mouse_genomes_project 18 55310665 55395469 + MGP_CBAJ_P0049300 Sncaip protein_coding protein_coding MGP_CBAJ_T0049301.1 MGP_CBAJ_G0024135.1 mouse_genomes_project 18 55316345 55395957 + MGP_CBAJ_P0049301 Sncaip protein_coding nonsense_mediated_decay MGP_CBAJ_T0049302.1 MGP_CBAJ_G0024135.1 mouse_genomes_project 18 55316345 55395957 + MGP_CBAJ_P0049302 Sncaip protein_coding nonsense_mediated_decay MGP_CBAJ_T0049303.1 MGP_CBAJ_G0024135.1 mouse_genomes_project 18 55316345 55395664 + MGP_CBAJ_P0049303 Sncaip protein_coding nonsense_mediated_decay MGP_CBAJ_T0049304.1 MGP_CBAJ_G0024135.1 mouse_genomes_project 18 55316391 55395390 + MGP_CBAJ_P0049304 Sncaip protein_coding protein_coding MGP_CBAJ_T0049305.1 MGP_CBAJ_G0024135.1 mouse_genomes_project 18 55316391 55395390 + MGP_CBAJ_P0049305 Sncaip protein_coding protein_coding MGP_CBAJ_T0049260.1 MGP_CBAJ_G0024120.1 mouse_genomes_project 18 49188607 49194017 - MGP_CBAJ_P0049260 protein_coding protein_coding MGP_CBAJ_T0049188.1 MGP_CBAJ_G0024087.1 mouse_genomes_project 18 44602118 44717189 + MGP_CBAJ_P0049188 Stk32a protein_coding protein_coding MGP_CBAJ_T0048601.1 MGP_CBAJ_G0023849.1 mouse_genomes_project 18 8058697 8069100 + MGP_CBAJ_P0048601 Snrpd1 protein_coding protein_coding MGP_CBAJ_T0006947.1 MGP_CBAJ_G0005705.1 mouse_genomes_project 18 83455230 83459020 - A330094K24Rik lincRNA lincRNA MGP_CBAJ_T0048666.1 MGP_CBAJ_G0023870.1 mouse_genomes_project 18 12824164 12958886 + MGP_CBAJ_P0048666 Taf4b protein_coding protein_coding MGP_CBAJ_T0048667.1 MGP_CBAJ_G0023870.1 mouse_genomes_project 18 12824586 12956655 + MGP_CBAJ_P0048667 Taf4b protein_coding unknown_likely_coding MGP_CBAJ_T0049165.1 MGP_CBAJ_G0024074.1 mouse_genomes_project 18 41375641 41376365 + MGP_CBAJ_P0049165 2900055J20Rik protein_coding protein_coding MGP_CBAJ_T0049768.1 MGP_CBAJ_G0024283.1 mouse_genomes_project 18 83511041 83520181 + MGP_CBAJ_P0049768 Atp5a1 protein_coding protein_coding MGP_CBAJ_T0049769.1 MGP_CBAJ_G0024283.1 mouse_genomes_project 18 83511268 83520178 + MGP_CBAJ_P0049769 Atp5a1 protein_coding protein_coding MGP_CBAJ_T0049770.1 MGP_CBAJ_G0024283.1 mouse_genomes_project 18 83511304 83519967 + MGP_CBAJ_P0049770 Atp5a1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049771.1 MGP_CBAJ_G0024283.1 mouse_genomes_project 18 83516266 83518411 + Atp5a1 protein_coding retained_intron MGP_CBAJ_T0049772.1 MGP_CBAJ_G0024283.1 mouse_genomes_project 18 83517143 83519201 + Atp5a1 protein_coding retained_intron MGP_CBAJ_T0048612.1 MGP_CBAJ_G0023854.1 mouse_genomes_project 18 9578244 9690186 + MGP_CBAJ_P0048612 Cables1 protein_coding protein_coding MGP_CBAJ_T0048795.1 MGP_CBAJ_G0023929.1 mouse_genomes_project 18 32570590 32642255 + MGP_CBAJ_P0048795 Bin1 protein_coding protein_coding MGP_CBAJ_T0048796.1 MGP_CBAJ_G0023929.1 mouse_genomes_project 18 32570590 32642255 + MGP_CBAJ_P0048796 Bin1 protein_coding protein_coding MGP_CBAJ_T0049222.1 MGP_CBAJ_G0024105.1 mouse_genomes_project 18 46337214 46399642 + MGP_CBAJ_P0049222 Ythdc2 protein_coding protein_coding MGP_CBAJ_T0049223.1 MGP_CBAJ_G0024105.1 mouse_genomes_project 18 46357442 46358773 + Ythdc2 protein_coding retained_intron MGP_CBAJ_T0049224.1 MGP_CBAJ_G0024105.1 mouse_genomes_project 18 46364216 46399649 + MGP_CBAJ_P0049224 Ythdc2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049225.1 MGP_CBAJ_G0024105.1 mouse_genomes_project 18 46364406 46365039 + Ythdc2 protein_coding retained_intron MGP_CBAJ_T0048832.1 MGP_CBAJ_G0023943.1 mouse_genomes_project 18 34946344 34952298 + MGP_CBAJ_P0048832 Wnt8a protein_coding protein_coding MGP_CBAJ_T0003738.1 MGP_CBAJ_G0003358.1 mouse_genomes_project 18 38523296 38538106 - Gm37165 antisense antisense MGP_CBAJ_T0003744.1 MGP_CBAJ_G0003364.1 mouse_genomes_project 18 44338341 44341763 + 4933407I08Rik antisense antisense MGP_CBAJ_T0049226.1 MGP_CBAJ_G0024106.1 mouse_genomes_project 18 46800713 46827373 + Kcnn2 protein_coding processed_transcript MGP_CBAJ_T0049227.1 MGP_CBAJ_G0024106.1 mouse_genomes_project 18 46800858 47247540 + MGP_CBAJ_P0049227 Kcnn2 protein_coding protein_coding MGP_CBAJ_T0049228.1 MGP_CBAJ_G0024106.1 mouse_genomes_project 18 46800858 47247679 + MGP_CBAJ_P0049228 Kcnn2 protein_coding protein_coding MGP_CBAJ_T0049229.1 MGP_CBAJ_G0024106.1 mouse_genomes_project 18 47109435 47230588 + Kcnn2 protein_coding retained_intron MGP_CBAJ_T0049230.1 MGP_CBAJ_G0024106.1 mouse_genomes_project 18 47109777 47143228 + Kcnn2 protein_coding retained_intron MGP_CBAJ_T0049231.1 MGP_CBAJ_G0024106.1 mouse_genomes_project 18 47110120 47237018 + Kcnn2 protein_coding processed_transcript MGP_CBAJ_T0049232.1 MGP_CBAJ_G0024106.1 mouse_genomes_project 18 47110120 47247537 + MGP_CBAJ_P0049232 Kcnn2 protein_coding protein_coding MGP_CBAJ_T0049196.1 MGP_CBAJ_G0024090.1 mouse_genomes_project 18 45163260 45174376 - MGP_CBAJ_P0049196 Spink1 protein_coding protein_coding MGP_CBAJ_T0048808.1 MGP_CBAJ_G0023935.1 mouse_genomes_project 18 33710917 33737572 - MGP_CBAJ_P0048808 Nrep protein_coding protein_coding MGP_CBAJ_T0048809.1 MGP_CBAJ_G0023935.1 mouse_genomes_project 18 33710917 33737781 - MGP_CBAJ_P0048809 Nrep protein_coding protein_coding MGP_CBAJ_T0048810.1 MGP_CBAJ_G0023935.1 mouse_genomes_project 18 33710917 33737613 - MGP_CBAJ_P0048810 Nrep protein_coding protein_coding MGP_CBAJ_T0099035.1 MGP_CBAJ_G0037290.1 mouse_genomes_project 18 48622824 48622932 + Gm23610 snRNA snRNA MGP_CBAJ_T0013174.1 MGP_CBAJ_G0011286.1 mouse_genomes_project 18 55437999 55438556 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0048994.1 MGP_CBAJ_G0023996.1 mouse_genomes_project 18 37676484 37945878 + MGP_CBAJ_P0048994 Pcdha2 protein_coding protein_coding MGP_CBAJ_T0048995.1 MGP_CBAJ_G0023996.1 mouse_genomes_project 18 37676503 37945609 + MGP_CBAJ_P0048995 Pcdha2 protein_coding protein_coding MGP_CBAJ_T0049163.1 MGP_CBAJ_G0024072.1 mouse_genomes_project 18 40837720 40840306 + MGP_CBAJ_P0049163 Pabpc2 protein_coding protein_coding MGP_CBAJ_T0049428.1 MGP_CBAJ_G0024184.1 mouse_genomes_project 18 65070266 65126874 - MGP_CBAJ_P0049428 Arhgef37 protein_coding protein_coding MGP_CBAJ_T0049781.1 MGP_CBAJ_G0024289.1 mouse_genomes_project 18 84132343 84133694 + MGP_CBAJ_P0049781 Gm6133 protein_coding protein_coding MGP_CBAJ_T0049548.1 MGP_CBAJ_G0024225.1 mouse_genomes_project 18 71739575 71772558 + MGP_CBAJ_P0049548 Impa2 protein_coding protein_coding MGP_CBAJ_T0049023.1 MGP_CBAJ_G0024016.1 mouse_genomes_project 18 38099591 38103124 + MGP_CBAJ_P0049023 Pcdhb5 protein_coding protein_coding MGP_CBAJ_T0010136.1 MGP_CBAJ_G0008274.1 mouse_genomes_project 18 64311996 64312084 + Mir5107 miRNA miRNA MGP_CBAJ_T0048500.1 MGP_CBAJ_G0023825.1 mouse_genomes_project 18 1575436 1621721 + MGP_CBAJ_P0048500 9430020K01Rik protein_coding protein_coding MGP_CBAJ_T0048671.1 MGP_CBAJ_G0023873.1 mouse_genomes_project 18 13648059 13940948 - MGP_CBAJ_P0048671 Chst9 protein_coding protein_coding MGP_CBAJ_T0048672.1 MGP_CBAJ_G0023873.1 mouse_genomes_project 18 13648059 13980273 - MGP_CBAJ_P0048672 Chst9 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049655.1 MGP_CBAJ_G0024248.1 mouse_genomes_project 18 75304851 75320832 - MGP_CBAJ_P0049655 Poli protein_coding protein_coding MGP_CBAJ_T0049656.1 MGP_CBAJ_G0024248.1 mouse_genomes_project 18 75304854 75320666 - MGP_CBAJ_P0049656 Poli protein_coding nonsense_mediated_decay MGP_CBAJ_T0049657.1 MGP_CBAJ_G0024248.1 mouse_genomes_project 18 75305081 75320685 - MGP_CBAJ_P0049657 Poli protein_coding protein_coding MGP_CBAJ_T0003750.1 MGP_CBAJ_G0003368.1 mouse_genomes_project 18 65317121 65318466 - Gm38165 antisense antisense MGP_CBAJ_T0049034.1 MGP_CBAJ_G0024025.1 mouse_genomes_project 18 38229724 38238409 + MGP_CBAJ_P0049034 Pcdhb14 protein_coding protein_coding MGP_CBAJ_T0013143.1 MGP_CBAJ_G0011255.1 mouse_genomes_project 18 10313582 10314357 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0098002.1 MGP_CBAJ_G0036275.1 mouse_genomes_project 18 78650706 78650854 - n-R5-8s1 rRNA rRNA MGP_CBAJ_T0049520.1 MGP_CBAJ_G0024215.1 mouse_genomes_project 18 69956789 69974114 + MGP_CBAJ_P0049520 Sec11c protein_coding protein_coding MGP_CBAJ_T0049521.1 MGP_CBAJ_G0024215.1 mouse_genomes_project 18 69956790 69974105 + MGP_CBAJ_P0049521 Sec11c protein_coding nonsense_mediated_decay MGP_CBAJ_T0049522.1 MGP_CBAJ_G0024215.1 mouse_genomes_project 18 69956812 69969177 + MGP_CBAJ_P0049522 Sec11c protein_coding protein_coding MGP_CBAJ_T0049523.1 MGP_CBAJ_G0024215.1 mouse_genomes_project 18 69956843 69974106 + Sec11c protein_coding retained_intron MGP_CBAJ_T0049524.1 MGP_CBAJ_G0024215.1 mouse_genomes_project 18 69957542 69969227 + Sec11c protein_coding processed_transcript MGP_CBAJ_T0049525.1 MGP_CBAJ_G0024215.1 mouse_genomes_project 18 69963046 69974109 + Sec11c protein_coding processed_transcript MGP_CBAJ_T0049526.1 MGP_CBAJ_G0024215.1 mouse_genomes_project 18 69970462 69974109 + Sec11c protein_coding processed_transcript MGP_CBAJ_T0010146.1 MGP_CBAJ_G0008284.1 mouse_genomes_project 18 72824476 72824530 - Mir7219 miRNA miRNA MGP_CBAJ_T0049024.1 MGP_CBAJ_G0024017.1 mouse_genomes_project 18 38112531 38114872 + MGP_CBAJ_P0049024 Pcdhb6 protein_coding protein_coding MGP_CBAJ_T0049025.1 MGP_CBAJ_G0024017.1 mouse_genomes_project 18 38112556 38116280 + MGP_CBAJ_P0049025 Pcdhb6 protein_coding protein_coding MGP_CBAJ_T0010145.1 MGP_CBAJ_G0008283.1 mouse_genomes_project 18 70453570 70453640 - Mir694 miRNA miRNA MGP_CBAJ_T0049543.1 MGP_CBAJ_G0024222.1 mouse_genomes_project 18 71223257 71226019 - MGP_CBAJ_P0049543 Mc4r protein_coding protein_coding MGP_CBAJ_T0049283.1 MGP_CBAJ_G0024124.1 mouse_genomes_project 18 52278886 52355939 + MGP_CBAJ_P0049283 Hsd17b4 protein_coding protein_coding MGP_CBAJ_T0049284.1 MGP_CBAJ_G0024124.1 mouse_genomes_project 18 52279179 52293766 + Hsd17b4 protein_coding processed_transcript MGP_CBAJ_T0049285.1 MGP_CBAJ_G0024124.1 mouse_genomes_project 18 52293522 52297608 + Hsd17b4 protein_coding retained_intron MGP_CBAJ_T0049286.1 MGP_CBAJ_G0024124.1 mouse_genomes_project 18 52350993 52355642 + Hsd17b4 protein_coding retained_intron MGP_CBAJ_T0097995.1 MGP_CBAJ_G0036268.1 mouse_genomes_project 18 34914025 34914142 + n-R5s24 rRNA rRNA MGP_CBAJ_T0049449.1 MGP_CBAJ_G0024191.1 mouse_genomes_project 18 65617093 65684634 + MGP_CBAJ_P0049449 Sh3tc2 protein_coding protein_coding MGP_CBAJ_T0049779.1 MGP_CBAJ_G0024288.1 mouse_genomes_project 18 83917366 83987093 - MGP_CBAJ_P0049779 protein_coding unknown_likely_coding MGP_CBAJ_T0049780.1 MGP_CBAJ_G0024288.1 mouse_genomes_project 18 83955794 83980587 - MGP_CBAJ_P0049780 protein_coding protein_coding MGP_CBAJ_T0099058.1 MGP_CBAJ_G0037313.1 mouse_genomes_project 18 97322641 97322705 + Gm23859 snRNA snRNA MGP_CBAJ_T0049155.1 MGP_CBAJ_G0024071.1 mouse_genomes_project 18 40446917 40534516 - MGP_CBAJ_P0049155 Nr3c1 protein_coding protein_coding MGP_CBAJ_T0049156.1 MGP_CBAJ_G0024071.1 mouse_genomes_project 18 40446919 40531054 - MGP_CBAJ_P0049156 Nr3c1 protein_coding protein_coding MGP_CBAJ_T0049157.1 MGP_CBAJ_G0024071.1 mouse_genomes_project 18 40448361 40533689 - MGP_CBAJ_P0049157 Nr3c1 protein_coding protein_coding MGP_CBAJ_T0049158.1 MGP_CBAJ_G0024071.1 mouse_genomes_project 18 40450856 40531041 - MGP_CBAJ_P0049158 Nr3c1 protein_coding protein_coding MGP_CBAJ_T0049159.1 MGP_CBAJ_G0024071.1 mouse_genomes_project 18 40463360 40533731 - MGP_CBAJ_P0049159 Nr3c1 protein_coding protein_coding MGP_CBAJ_T0049160.1 MGP_CBAJ_G0024071.1 mouse_genomes_project 18 40530679 40537867 - MGP_CBAJ_P0049160 Nr3c1 protein_coding protein_coding MGP_CBAJ_T0049161.1 MGP_CBAJ_G0024071.1 mouse_genomes_project 18 40530894 40533126 - MGP_CBAJ_P0049161 Nr3c1 protein_coding protein_coding MGP_CBAJ_T0049162.1 MGP_CBAJ_G0024071.1 mouse_genomes_project 18 40530968 40537865 - MGP_CBAJ_P0049162 Nr3c1 protein_coding protein_coding MGP_CBAJ_T0013150.1 MGP_CBAJ_G0011262.1 mouse_genomes_project 18 23558539 23560020 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010112.1 MGP_CBAJ_G0008250.1 mouse_genomes_project 18 7172501 7172591 - Gm23637 miRNA miRNA MGP_CBAJ_T0049822.1 MGP_CBAJ_G0024303.1 mouse_genomes_project 18 87050700 87075529 - MGP_CBAJ_P0049822 Sall3 protein_coding protein_coding MGP_CBAJ_T0003717.1 MGP_CBAJ_G0003341.1 mouse_genomes_project 18 3235538 3248905 + Gm17036 antisense antisense MGP_CBAJ_T0010140.1 MGP_CBAJ_G0008278.1 mouse_genomes_project 18 64963219 64963332 + Gm25301 miRNA miRNA MGP_CBAJ_T0099041.1 MGP_CBAJ_G0037296.1 mouse_genomes_project 18 60792622 60792728 - Gm26038 snRNA snRNA MGP_CBAJ_T0049773.1 MGP_CBAJ_G0024284.1 mouse_genomes_project 18 83533395 83662374 + MGP_CBAJ_P0049773 Pstpip2 protein_coding protein_coding MGP_CBAJ_T0006944.1 MGP_CBAJ_G0005702.1 mouse_genomes_project 18 79187219 79189405 + D730045A05Rik lincRNA lincRNA MGP_CBAJ_T0048670.1 MGP_CBAJ_G0023872.1 mouse_genomes_project 18 13569818 13588864 - MGP_CBAJ_P0048670 Aqp4 protein_coding protein_coding MGP_CBAJ_T0049354.1 MGP_CBAJ_G0024159.1 mouse_genomes_project 18 62412577 62432272 + MGP_CBAJ_P0049354 A730017C20Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0049355.1 MGP_CBAJ_G0024159.1 mouse_genomes_project 18 62412611 62432272 + MGP_CBAJ_P0049355 A730017C20Rik protein_coding protein_coding MGP_CBAJ_T0049356.1 MGP_CBAJ_G0024159.1 mouse_genomes_project 18 62412791 62432272 + MGP_CBAJ_P0049356 A730017C20Rik protein_coding protein_coding MGP_CBAJ_T0049357.1 MGP_CBAJ_G0024159.1 mouse_genomes_project 18 62412795 62430931 + MGP_CBAJ_P0049357 A730017C20Rik protein_coding protein_coding MGP_CBAJ_T0049358.1 MGP_CBAJ_G0024159.1 mouse_genomes_project 18 62412823 62431134 + MGP_CBAJ_P0049358 A730017C20Rik protein_coding protein_coding MGP_CBAJ_T0049359.1 MGP_CBAJ_G0024159.1 mouse_genomes_project 18 62412839 62429974 + A730017C20Rik protein_coding retained_intron MGP_CBAJ_T0049360.1 MGP_CBAJ_G0024159.1 mouse_genomes_project 18 62412840 62431241 + MGP_CBAJ_P0049360 A730017C20Rik protein_coding protein_coding MGP_CBAJ_T0100283.1 MGP_CBAJ_G0038538.1 mouse_genomes_project 18 34074912 34075044 + Gm23639 snoRNA snoRNA MGP_CBAJ_T0049361.1 MGP_CBAJ_G0024160.1 mouse_genomes_project 18 62538492 62811042 + MGP_CBAJ_P0049361 Chsy3 protein_coding protein_coding MGP_CBAJ_T0099026.1 MGP_CBAJ_G0037281.1 mouse_genomes_project 18 20429462 20429564 - Gm22886 snRNA snRNA MGP_CBAJ_T0003763.1 MGP_CBAJ_G0003374.1 mouse_genomes_project 18 86369365 86372636 + Gm26676 antisense antisense MGP_CBAJ_T0049648.1 MGP_CBAJ_G0024246.1 mouse_genomes_project 18 75234599 75256951 - MGP_CBAJ_P0049648 4930503L19Rik protein_coding protein_coding MGP_CBAJ_T0049666.1 MGP_CBAJ_G0024251.1 mouse_genomes_project 18 78700042 78728379 + MGP_CBAJ_P0049666 Mex3c protein_coding protein_coding MGP_CBAJ_T0049129.1 MGP_CBAJ_G0024068.1 mouse_genomes_project 18 39517148 39532138 - MGP_CBAJ_P0049129 Spry4 protein_coding protein_coding MGP_CBAJ_T0048543.1 MGP_CBAJ_G0023830.1 mouse_genomes_project 18 3222352 3263699 - MGP_CBAJ_P0048543 Kif5b protein_coding protein_coding MGP_CBAJ_T0048544.1 MGP_CBAJ_G0023830.1 mouse_genomes_project 18 3224440 3236167 - Kif5b protein_coding retained_intron MGP_CBAJ_T0048545.1 MGP_CBAJ_G0023830.1 mouse_genomes_project 18 3235061 3245597 - Kif5b protein_coding retained_intron MGP_CBAJ_T0048546.1 MGP_CBAJ_G0023830.1 mouse_genomes_project 18 3236195 3263646 - MGP_CBAJ_P0048546 Kif5b protein_coding protein_coding MGP_CBAJ_T0048547.1 MGP_CBAJ_G0023830.1 mouse_genomes_project 18 3242423 3244609 - Kif5b protein_coding retained_intron MGP_CBAJ_T0048548.1 MGP_CBAJ_G0023830.1 mouse_genomes_project 18 3263489 3264350 - Kif5b protein_coding processed_transcript MGP_CBAJ_T0049460.1 MGP_CBAJ_G0024199.1 mouse_genomes_project 18 66380033 66380854 + MGP_CBAJ_P0049460 Gm17732 protein_coding protein_coding MGP_CBAJ_T0049239.1 MGP_CBAJ_G0024112.1 mouse_genomes_project 18 48236147 48281148 - MGP_CBAJ_P0049239 Tmed7 protein_coding protein_coding MGP_CBAJ_T0049241.1 MGP_CBAJ_G0024112.1 mouse_genomes_project 18 48261986 48281350 - Tmed7 protein_coding retained_intron MGP_CBAJ_T0049242.1 MGP_CBAJ_G0024112.1 mouse_genomes_project 18 48264079 48281369 - MGP_CBAJ_P0049242 Tmed7 protein_coding protein_coding MGP_CBAJ_T0017378.1 MGP_CBAJ_G0015108.1 mouse_genomes_project 18 60613364 60646150 - 1700066O22Rik processed_transcript processed_transcript MGP_CBAJ_T0017379.1 MGP_CBAJ_G0015108.1 mouse_genomes_project 18 60618323 60646126 - 1700066O22Rik processed_transcript processed_transcript MGP_CBAJ_T0017381.1 MGP_CBAJ_G0015108.1 mouse_genomes_project 18 60628039 60646137 - 1700066O22Rik processed_transcript processed_transcript MGP_CBAJ_T0017382.1 MGP_CBAJ_G0015108.1 mouse_genomes_project 18 60628050 60646114 - 1700066O22Rik processed_transcript processed_transcript MGP_CBAJ_T0017383.1 MGP_CBAJ_G0015108.1 mouse_genomes_project 18 60642830 60646121 - 1700066O22Rik processed_transcript processed_transcript MGP_CBAJ_T0006914.1 MGP_CBAJ_G0005680.1 mouse_genomes_project 18 32553193 32571658 - A830052D11Rik lincRNA lincRNA MGP_CBAJ_T0049565.1 MGP_CBAJ_G0024235.1 mouse_genomes_project 18 72319545 72423313 + MGP_CBAJ_P0049565 Cep192 protein_coding protein_coding MGP_CBAJ_T0049566.1 MGP_CBAJ_G0024235.1 mouse_genomes_project 18 72322221 72423022 + MGP_CBAJ_P0049566 Cep192 protein_coding unknown_likely_coding MGP_CBAJ_T0048585.1 MGP_CBAJ_G0023845.1 mouse_genomes_project 18 7365840 7403053 - MGP_CBAJ_P0048585 Usp14 protein_coding protein_coding MGP_CBAJ_T0048586.1 MGP_CBAJ_G0023845.1 mouse_genomes_project 18 7366002 7402979 - MGP_CBAJ_P0048586 Usp14 protein_coding protein_coding MGP_CBAJ_T0048587.1 MGP_CBAJ_G0023845.1 mouse_genomes_project 18 7367308 7370941 - Usp14 protein_coding retained_intron MGP_CBAJ_T0048588.1 MGP_CBAJ_G0023845.1 mouse_genomes_project 18 7372191 7380559 - Usp14 protein_coding retained_intron MGP_CBAJ_T0048589.1 MGP_CBAJ_G0023845.1 mouse_genomes_project 18 7381493 7402993 - Usp14 protein_coding retained_intron MGP_CBAJ_T0048590.1 MGP_CBAJ_G0023845.1 mouse_genomes_project 18 7384141 7390148 - Usp14 protein_coding retained_intron MGP_CBAJ_T0048591.1 MGP_CBAJ_G0023845.1 mouse_genomes_project 18 7397062 7402934 - Usp14 protein_coding retained_intron MGP_CBAJ_T0006952.1 MGP_CBAJ_G0005709.1 mouse_genomes_project 18 89462745 89464078 - 1700095A13Rik lincRNA lincRNA MGP_CBAJ_T0099048.1 MGP_CBAJ_G0037303.1 mouse_genomes_project 18 68771953 68772053 - Gm24504 snRNA snRNA MGP_CBAJ_T0049000.1 MGP_CBAJ_G0023999.1 mouse_genomes_project 18 37692842 38666268 + MGP_CBAJ_P0049000 Gm42416 protein_coding protein_coding MGP_CBAJ_T0048996.1 MGP_CBAJ_G0023997.1 mouse_genomes_project 18 37683376 37945878 + MGP_CBAJ_P0048996 Pcdha3 protein_coding protein_coding MGP_CBAJ_T0049082.1 MGP_CBAJ_G0024057.1 mouse_genomes_project 18 38669662 38770782 - MGP_CBAJ_P0049082 Diaph1 protein_coding unknown_likely_coding MGP_CBAJ_T0049083.1 MGP_CBAJ_G0024057.1 mouse_genomes_project 18 38669670 38770940 - MGP_CBAJ_P0049083 Diaph1 protein_coding protein_coding MGP_CBAJ_T0049084.1 MGP_CBAJ_G0024057.1 mouse_genomes_project 18 38669672 38770887 - MGP_CBAJ_P0049084 Diaph1 protein_coding protein_coding MGP_CBAJ_T0049085.1 MGP_CBAJ_G0024057.1 mouse_genomes_project 18 38669672 38770845 - MGP_CBAJ_P0049085 Diaph1 protein_coding protein_coding MGP_CBAJ_T0049086.1 MGP_CBAJ_G0024057.1 mouse_genomes_project 18 38669674 38738110 - MGP_CBAJ_P0049086 Diaph1 protein_coding protein_coding MGP_CBAJ_T0049087.1 MGP_CBAJ_G0024057.1 mouse_genomes_project 18 38670893 38770875 - MGP_CBAJ_P0049087 Diaph1 protein_coding protein_coding MGP_CBAJ_T0049088.1 MGP_CBAJ_G0024057.1 mouse_genomes_project 18 38671169 38679448 - Diaph1 protein_coding processed_transcript MGP_CBAJ_T0049089.1 MGP_CBAJ_G0024057.1 mouse_genomes_project 18 38681525 38682185 - Diaph1 protein_coding retained_intron MGP_CBAJ_T0049090.1 MGP_CBAJ_G0024057.1 mouse_genomes_project 18 38727940 38729726 - Diaph1 protein_coding retained_intron MGP_CBAJ_T0010132.1 MGP_CBAJ_G0008270.1 mouse_genomes_project 18 59482564 59482624 + Mir1258 miRNA miRNA MGP_CBAJ_T0049046.1 MGP_CBAJ_G0024036.1 mouse_genomes_project 18 38451978 38667943 + MGP_CBAJ_P0049046 Pcdhga1 protein_coding protein_coding MGP_CBAJ_T0049047.1 MGP_CBAJ_G0024036.1 mouse_genomes_project 18 38451978 38455225 + MGP_CBAJ_P0049047 Pcdhga1 protein_coding protein_coding MGP_CBAJ_T0048690.1 MGP_CBAJ_G0023884.1 mouse_genomes_project 18 19790059 19876422 - MGP_CBAJ_P0048690 Trappc8 protein_coding protein_coding MGP_CBAJ_T0048691.1 MGP_CBAJ_G0023884.1 mouse_genomes_project 18 19790910 19876411 - MGP_CBAJ_P0048691 Trappc8 protein_coding unknown_likely_coding MGP_CBAJ_T0048692.1 MGP_CBAJ_G0023884.1 mouse_genomes_project 18 19819099 19876422 - MGP_CBAJ_P0048692 Trappc8 protein_coding protein_coding MGP_CBAJ_T0048726.1 MGP_CBAJ_G0023896.1 mouse_genomes_project 18 23217916 23228904 - MGP_CBAJ_P0048726 Zscan30 protein_coding protein_coding MGP_CBAJ_T0048970.1 MGP_CBAJ_G0023984.1 mouse_genomes_project 18 37392647 37395050 + MGP_CBAJ_P0048970 protein_coding protein_coding MGP_CBAJ_T0048971.1 MGP_CBAJ_G0023984.1 mouse_genomes_project 18 37392796 37394925 + protein_coding processed_transcript MGP_CBAJ_T0048972.1 MGP_CBAJ_G0023984.1 mouse_genomes_project 18 37392805 37394182 + protein_coding processed_transcript MGP_CBAJ_T0003765.1 MGP_CBAJ_G0003376.1 mouse_genomes_project 18 91354279 91357396 - antisense antisense MGP_CBAJ_T0048749.1 MGP_CBAJ_G0023906.1 mouse_genomes_project 18 24027098 24027407 - MGP_CBAJ_P0048749 Gm9955 protein_coding protein_coding MGP_CBAJ_T0048706.1 MGP_CBAJ_G0023892.1 mouse_genomes_project 18 21833313 22215792 - MGP_CBAJ_P0048706 Nol4 protein_coding protein_coding MGP_CBAJ_T0048707.1 MGP_CBAJ_G0023892.1 mouse_genomes_project 18 21833323 22023980 - MGP_CBAJ_P0048707 Nol4 protein_coding protein_coding MGP_CBAJ_T0048708.1 MGP_CBAJ_G0023892.1 mouse_genomes_project 18 21833523 22214406 - MGP_CBAJ_P0048708 Nol4 protein_coding protein_coding MGP_CBAJ_T0048709.1 MGP_CBAJ_G0023892.1 mouse_genomes_project 18 21834440 22023980 - MGP_CBAJ_P0048709 Nol4 protein_coding protein_coding MGP_CBAJ_T0048710.1 MGP_CBAJ_G0023892.1 mouse_genomes_project 18 21834666 22215828 - MGP_CBAJ_P0048710 Nol4 protein_coding protein_coding MGP_CBAJ_T0048711.1 MGP_CBAJ_G0023892.1 mouse_genomes_project 18 21990887 21996963 - Nol4 protein_coding processed_transcript MGP_CBAJ_T0048712.1 MGP_CBAJ_G0023892.1 mouse_genomes_project 18 22083430 22214689 - MGP_CBAJ_P0048712 Nol4 protein_coding protein_coding MGP_CBAJ_T0048713.1 MGP_CBAJ_G0023892.1 mouse_genomes_project 18 22094093 22141432 - Nol4 protein_coding processed_transcript MGP_CBAJ_T0049362.1 MGP_CBAJ_G0024161.1 mouse_genomes_project 18 63678952 63721402 + MGP_CBAJ_P0049362 Gm4951 protein_coding protein_coding MGP_CBAJ_T0048860.1 MGP_CBAJ_G0023949.1 mouse_genomes_project 18 35116093 35153804 - MGP_CBAJ_P0048860 Gfra3 protein_coding protein_coding MGP_CBAJ_T0049287.1 MGP_CBAJ_G0024125.1 mouse_genomes_project 18 52434054 52438705 + MGP_CBAJ_P0049287 Fam170a protein_coding protein_coding MGP_CBAJ_T0100272.1 MGP_CBAJ_G0038527.1 mouse_genomes_project 18 6921646 6921774 + Gm22765 snoRNA snoRNA MGP_CBAJ_T0048491.1 MGP_CBAJ_G0023821.1 mouse_genomes_project 18 360023 368470 + MGP_CBAJ_P0048491 Bambi protein_coding protein_coding MGP_CBAJ_T0049403.1 MGP_CBAJ_G0024174.1 mouse_genomes_project 18 64425567 64432317 + MGP_CBAJ_P0049403 Arsi protein_coding protein_coding MGP_CBAJ_T0049178.1 MGP_CBAJ_G0024083.1 mouse_genomes_project 18 43761807 43764509 + MGP_CBAJ_P0049178 Pou4f3 protein_coding protein_coding MGP_CBAJ_T0098159.1 MGP_CBAJ_G0036432.1 mouse_genomes_project 18 26493950 26494178 - Gm26106 ribozyme ribozyme MGP_CBAJ_T0048638.1 MGP_CBAJ_G0023861.1 mouse_genomes_project 18 10470703 10524214 + Ttc39c protein_coding retained_intron MGP_CBAJ_T0048639.1 MGP_CBAJ_G0023861.1 mouse_genomes_project 18 10471245 10581444 + MGP_CBAJ_P0048639 Ttc39c protein_coding protein_coding MGP_CBAJ_T0048640.1 MGP_CBAJ_G0023861.1 mouse_genomes_project 18 10576952 10579078 + Ttc39c protein_coding retained_intron MGP_CBAJ_T0013161.1 MGP_CBAJ_G0011273.1 mouse_genomes_project 18 39663874 39663988 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0049487.1 MGP_CBAJ_G0024206.1 mouse_genomes_project 18 68258854 68323831 + MGP_CBAJ_P0049487 Onecut2 protein_coding protein_coding MGP_CBAJ_T0049488.1 MGP_CBAJ_G0024206.1 mouse_genomes_project 18 68258854 68323833 + MGP_CBAJ_P0049488 Onecut2 protein_coding protein_coding MGP_CBAJ_T0048578.1 MGP_CBAJ_G0023838.1 mouse_genomes_project 18 6478407 6481754 + MGP_CBAJ_P0048578 Fzd8 protein_coding protein_coding MGP_CBAJ_T0049338.1 MGP_CBAJ_G0024149.1 mouse_genomes_project 18 59967568 59986954 - MGP_CBAJ_P0049338 C330018D20Rik protein_coding protein_coding MGP_CBAJ_T0049339.1 MGP_CBAJ_G0024149.1 mouse_genomes_project 18 59969349 59986940 - MGP_CBAJ_P0049339 C330018D20Rik protein_coding protein_coding MGP_CBAJ_T0049340.1 MGP_CBAJ_G0024149.1 mouse_genomes_project 18 59980114 59986832 - C330018D20Rik protein_coding processed_transcript MGP_CBAJ_T0048977.1 MGP_CBAJ_G0023989.1 mouse_genomes_project 18 37471945 37484936 + MGP_CBAJ_P0048977 Ik protein_coding protein_coding MGP_CBAJ_T0048978.1 MGP_CBAJ_G0023989.1 mouse_genomes_project 18 37471990 37484939 + MGP_CBAJ_P0048978 Ik protein_coding unknown_likely_coding MGP_CBAJ_T0049444.1 MGP_CBAJ_G0024189.1 mouse_genomes_project 18 65359218 65422398 - MGP_CBAJ_P0049444 Afap1l1 protein_coding protein_coding MGP_CBAJ_T0049445.1 MGP_CBAJ_G0024189.1 mouse_genomes_project 18 65359218 65422307 - MGP_CBAJ_P0049445 Afap1l1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049446.1 MGP_CBAJ_G0024189.1 mouse_genomes_project 18 65359896 65422356 - Afap1l1 protein_coding retained_intron MGP_CBAJ_T0049173.1 MGP_CBAJ_G0024079.1 mouse_genomes_project 18 43496255 43496549 + MGP_CBAJ_P0049173 Gm5689 protein_coding protein_coding MGP_CBAJ_T0048501.1 MGP_CBAJ_G0023826.1 mouse_genomes_project 18 1884994 2107125 + MGP_CBAJ_P0048501 Svil protein_coding protein_coding MGP_CBAJ_T0048502.1 MGP_CBAJ_G0023826.1 mouse_genomes_project 18 1885021 2045001 + Svil protein_coding retained_intron MGP_CBAJ_T0048503.1 MGP_CBAJ_G0023826.1 mouse_genomes_project 18 1885159 2044917 + Svil protein_coding retained_intron MGP_CBAJ_T0048504.1 MGP_CBAJ_G0023826.1 mouse_genomes_project 18 1967428 2033480 + MGP_CBAJ_P0048504 Svil protein_coding protein_coding MGP_CBAJ_T0048505.1 MGP_CBAJ_G0023826.1 mouse_genomes_project 18 1968233 2106446 + MGP_CBAJ_P0048505 Svil protein_coding protein_coding MGP_CBAJ_T0048506.1 MGP_CBAJ_G0023826.1 mouse_genomes_project 18 1968551 1978618 + Svil protein_coding processed_transcript MGP_CBAJ_T0048507.1 MGP_CBAJ_G0023826.1 mouse_genomes_project 18 2015424 2106268 + MGP_CBAJ_P0048507 Svil protein_coding protein_coding MGP_CBAJ_T0048508.1 MGP_CBAJ_G0023826.1 mouse_genomes_project 18 2026844 2106276 + MGP_CBAJ_P0048508 Svil protein_coding protein_coding MGP_CBAJ_T0048509.1 MGP_CBAJ_G0023826.1 mouse_genomes_project 18 2026846 2106000 + MGP_CBAJ_P0048509 Svil protein_coding nonsense_mediated_decay MGP_CBAJ_T0048510.1 MGP_CBAJ_G0023826.1 mouse_genomes_project 18 2033177 2107122 + MGP_CBAJ_P0048510 Svil protein_coding protein_coding MGP_CBAJ_T0048511.1 MGP_CBAJ_G0023826.1 mouse_genomes_project 18 2051348 2107125 + MGP_CBAJ_P0048511 Svil protein_coding nonsense_mediated_decay MGP_CBAJ_T0048512.1 MGP_CBAJ_G0023826.1 mouse_genomes_project 18 2083047 2084183 + Svil protein_coding retained_intron MGP_CBAJ_T0048513.1 MGP_CBAJ_G0023826.1 mouse_genomes_project 18 2092823 2104857 + MGP_CBAJ_P0048513 Svil protein_coding protein_coding MGP_CBAJ_T0048514.1 MGP_CBAJ_G0023826.1 mouse_genomes_project 18 2102091 2107052 + Svil protein_coding retained_intron MGP_CBAJ_T0098297.1 MGP_CBAJ_G0036564.1 mouse_genomes_project 18 2585148 2587379 - Gm26575 sense_intronic sense_intronic MGP_CBAJ_T0049350.1 MGP_CBAJ_G0024155.1 mouse_genomes_project 18 61187983 61415138 - MGP_CBAJ_P0049350 Fbn2 protein_coding protein_coding MGP_CBAJ_T0048580.1 MGP_CBAJ_G0023840.1 mouse_genomes_project 18 6577826 6723810 - MGP_CBAJ_P0048580 Ccny protein_coding protein_coding MGP_CBAJ_T0049786.1 MGP_CBAJ_G0024294.1 mouse_genomes_project 18 86212059 86220453 - MGP_CBAJ_P0049786 Rbfa protein_coding protein_coding MGP_CBAJ_T0048813.1 MGP_CBAJ_G0023938.1 mouse_genomes_project 18 34568908 34677218 + MGP_CBAJ_P0048813 Apc protein_coding protein_coding MGP_CBAJ_T0048814.1 MGP_CBAJ_G0023938.1 mouse_genomes_project 18 34568968 34685897 + MGP_CBAJ_P0048814 Apc protein_coding protein_coding MGP_CBAJ_T0048815.1 MGP_CBAJ_G0023938.1 mouse_genomes_project 18 34568968 34682318 + MGP_CBAJ_P0048815 Apc protein_coding protein_coding MGP_CBAJ_T0048816.1 MGP_CBAJ_G0023938.1 mouse_genomes_project 18 34568997 34659945 + Apc protein_coding retained_intron MGP_CBAJ_T0048817.1 MGP_CBAJ_G0023938.1 mouse_genomes_project 18 34569236 34631480 + MGP_CBAJ_P0048817 Apc protein_coding nonsense_mediated_decay MGP_CBAJ_T0048818.1 MGP_CBAJ_G0023938.1 mouse_genomes_project 18 34597348 34615654 + Apc protein_coding retained_intron MGP_CBAJ_T0048819.1 MGP_CBAJ_G0023938.1 mouse_genomes_project 18 34597352 34646971 + MGP_CBAJ_P0048819 Apc protein_coding protein_coding MGP_CBAJ_T0048820.1 MGP_CBAJ_G0023938.1 mouse_genomes_project 18 34659708 34678038 + MGP_CBAJ_P0048820 Apc protein_coding nonsense_mediated_decay MGP_CBAJ_T0048821.1 MGP_CBAJ_G0023938.1 mouse_genomes_project 18 34661003 34674450 + Apc protein_coding processed_transcript MGP_CBAJ_T0006900.1 MGP_CBAJ_G0005670.1 mouse_genomes_project 18 2154164 2157016 - Gm26682 lincRNA lincRNA MGP_CBAJ_T0049647.1 MGP_CBAJ_G0024245.1 mouse_genomes_project 18 74991607 74995763 - MGP_CBAJ_P0049647 Dynap protein_coding protein_coding MGP_CBAJ_T0049685.1 MGP_CBAJ_G0024258.1 mouse_genomes_project 18 79390818 79403392 - MGP_CBAJ_P0049685 Ska1 protein_coding protein_coding MGP_CBAJ_T0049686.1 MGP_CBAJ_G0024258.1 mouse_genomes_project 18 79390818 79403392 - MGP_CBAJ_P0049686 Ska1 protein_coding protein_coding MGP_CBAJ_T0049166.1 MGP_CBAJ_G0024075.1 mouse_genomes_project 18 41377030 41699478 + MGP_CBAJ_P0049166 Kctd16 protein_coding protein_coding MGP_CBAJ_T0049040.1 MGP_CBAJ_G0024031.1 mouse_genomes_project 18 38287247 38294645 + MGP_CBAJ_P0049040 Pcdhb20 protein_coding protein_coding MGP_CBAJ_T0049189.1 MGP_CBAJ_G0024088.1 mouse_genomes_project 18 44723471 44837574 - MGP_CBAJ_P0049189 Dpysl3 protein_coding protein_coding MGP_CBAJ_T0049190.1 MGP_CBAJ_G0024088.1 mouse_genomes_project 18 44725214 44726524 - Dpysl3 protein_coding processed_transcript MGP_CBAJ_T0049191.1 MGP_CBAJ_G0024088.1 mouse_genomes_project 18 44726720 44768554 - MGP_CBAJ_P0049191 Dpysl3 protein_coding protein_coding MGP_CBAJ_T0049192.1 MGP_CBAJ_G0024088.1 mouse_genomes_project 18 44726781 44788655 - MGP_CBAJ_P0049192 Dpysl3 protein_coding protein_coding MGP_CBAJ_T0049193.1 MGP_CBAJ_G0024088.1 mouse_genomes_project 18 44732121 44743185 - MGP_CBAJ_P0049193 Dpysl3 protein_coding protein_coding MGP_CBAJ_T0049194.1 MGP_CBAJ_G0024088.1 mouse_genomes_project 18 44735492 44742780 - MGP_CBAJ_P0049194 Dpysl3 protein_coding protein_coding MGP_CBAJ_T0013166.1 MGP_CBAJ_G0011278.1 mouse_genomes_project 18 43581807 43582245 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099057.1 MGP_CBAJ_G0037312.1 mouse_genomes_project 18 93009720 93009827 + Gm25453 snRNA snRNA MGP_CBAJ_T0048697.1 MGP_CBAJ_G0023888.1 mouse_genomes_project 18 20164441 20342646 - MGP_CBAJ_P0048697 Garem protein_coding protein_coding MGP_CBAJ_T0006901.1 MGP_CBAJ_G0005671.1 mouse_genomes_project 18 8157456 8164864 + 4930563E18Rik lincRNA lincRNA MGP_CBAJ_T0010147.1 MGP_CBAJ_G0008285.1 mouse_genomes_project 18 73346642 73346744 + Mir6356 miRNA miRNA MGP_CBAJ_T0048916.1 MGP_CBAJ_G0023967.1 mouse_genomes_project 18 36209811 36215217 - MGP_CBAJ_P0048916 Spata24 protein_coding protein_coding MGP_CBAJ_T0048917.1 MGP_CBAJ_G0023967.1 mouse_genomes_project 18 36213047 36215217 - MGP_CBAJ_P0048917 Spata24 protein_coding protein_coding MGP_CBAJ_T0049639.1 MGP_CBAJ_G0024243.1 mouse_genomes_project 18 74658143 74680977 + Ccdc68 protein_coding processed_transcript MGP_CBAJ_T0049640.1 MGP_CBAJ_G0024243.1 mouse_genomes_project 18 74658287 74675885 + Ccdc68 protein_coding processed_transcript MGP_CBAJ_T0049641.1 MGP_CBAJ_G0024243.1 mouse_genomes_project 18 74658293 74705888 + MGP_CBAJ_P0049641 Ccdc68 protein_coding protein_coding MGP_CBAJ_T0049642.1 MGP_CBAJ_G0024243.1 mouse_genomes_project 18 74671127 74705439 + MGP_CBAJ_P0049642 Ccdc68 protein_coding unknown_likely_coding MGP_CBAJ_T0048600.1 MGP_CBAJ_G0023848.1 mouse_genomes_project 18 8004265 8033885 - MGP_CBAJ_P0048600 Esco1 protein_coding protein_coding MGP_CBAJ_T0003745.1 MGP_CBAJ_G0003365.1 mouse_genomes_project 18 46145818 46160295 + A930012L18Rik antisense antisense MGP_CBAJ_T0003746.1 MGP_CBAJ_G0003365.1 mouse_genomes_project 18 46146256 46156600 + A930012L18Rik antisense antisense MGP_CBAJ_T0098191.1 MGP_CBAJ_G0036464.1 mouse_genomes_project 18 80046359 80046499 - Gm23119 scaRNA scaRNA MGP_CBAJ_T0006948.1 MGP_CBAJ_G0005706.1 mouse_genomes_project 18 87366769 87376573 - 4930594M17Rik lincRNA lincRNA MGP_CBAJ_T0049032.1 MGP_CBAJ_G0024023.1 mouse_genomes_project 18 38217689 38220723 + MGP_CBAJ_P0049032 Pcdhb12 protein_coding protein_coding MGP_CBAJ_T0049068.1 MGP_CBAJ_G0024051.1 mouse_genomes_project 18 38568912 38667943 + MGP_CBAJ_P0049068 protein_coding protein_coding MGP_CBAJ_T0003754.1 MGP_CBAJ_G0003370.1 mouse_genomes_project 18 68047978 68185764 - St8sia3os antisense antisense MGP_CBAJ_T0003755.1 MGP_CBAJ_G0003370.1 mouse_genomes_project 18 68092635 68185764 - St8sia3os antisense antisense MGP_CBAJ_T0003756.1 MGP_CBAJ_G0003370.1 mouse_genomes_project 18 68177352 68185755 - St8sia3os antisense antisense MGP_CBAJ_T0003757.1 MGP_CBAJ_G0003370.1 mouse_genomes_project 18 68184058 68185741 - St8sia3os antisense antisense MGP_CBAJ_T0051212.1 MGP_CBAJ_G0024772.1 mouse_genomes_project 19 35948652 35950625 + MGP_CBAJ_P0051212 protein_coding protein_coding MGP_CBAJ_T0049985.1 MGP_CBAJ_G0024347.1 mouse_genomes_project 19 953721 956236 - MGP_CBAJ_P0049985 Gstp1 protein_coding protein_coding MGP_CBAJ_T0006963.1 MGP_CBAJ_G0005714.1 mouse_genomes_project 19 3976775 3978260 + Gm14968 lincRNA lincRNA MGP_CBAJ_T0050663.1 MGP_CBAJ_G0024534.1 mouse_genomes_project 19 6497586 6509832 + MGP_CBAJ_P0050663 Tut1 protein_coding protein_coding MGP_CBAJ_T0050892.1 MGP_CBAJ_G0024638.1 mouse_genomes_project 19 11253076 11254000 + MGP_CBAJ_P0050892 Olfr1454 protein_coding protein_coding MGP_CBAJ_T0050131.1 MGP_CBAJ_G0024390.1 mouse_genomes_project 19 2087888 2095928 + MGP_CBAJ_P0050131 Slc29a2 protein_coding protein_coding MGP_CBAJ_T0051920.1 MGP_CBAJ_G0025008.1 mouse_genomes_project 19 65963454 65992331 - MGP_CBAJ_P0051920 Sfxn4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051921.1 MGP_CBAJ_G0025008.1 mouse_genomes_project 19 65964878 65992383 - MGP_CBAJ_P0051921 Sfxn4 protein_coding protein_coding MGP_CBAJ_T0051922.1 MGP_CBAJ_G0025008.1 mouse_genomes_project 19 65964888 65992328 - MGP_CBAJ_P0051922 Sfxn4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0011350.1 MGP_CBAJ_G0009488.1 mouse_genomes_project 19 17898429 17898645 - Gm24190 misc_RNA misc_RNA MGP_CBAJ_T0006966.1 MGP_CBAJ_G0005717.1 mouse_genomes_project 19 8860565 8863513 - AW112010 lincRNA lincRNA MGP_CBAJ_T0051873.1 MGP_CBAJ_G0024986.1 mouse_genomes_project 19 62361563 62939652 + MGP_CBAJ_P0051873 Atrnl1 protein_coding protein_coding MGP_CBAJ_T0049898.1 MGP_CBAJ_G0024328.1 mouse_genomes_project 19 166891 176167 + MGP_CBAJ_P0049898 Mtl5 protein_coding protein_coding MGP_CBAJ_T0049899.1 MGP_CBAJ_G0024328.1 mouse_genomes_project 19 166956 185101 + MGP_CBAJ_P0049899 Mtl5 protein_coding protein_coding MGP_CBAJ_T0051135.1 MGP_CBAJ_G0024740.1 mouse_genomes_project 19 30674251 30676482 + MGP_CBAJ_P0051135 Trpd52l3 protein_coding protein_coding MGP_CBAJ_T0051542.1 MGP_CBAJ_G0024887.1 mouse_genomes_project 19 47649138 47746194 + MGP_CBAJ_P0051542 Pax2 protein_coding protein_coding MGP_CBAJ_T0051543.1 MGP_CBAJ_G0024887.1 mouse_genomes_project 19 47650486 47746214 + MGP_CBAJ_P0051543 Pax2 protein_coding protein_coding MGP_CBAJ_T0051544.1 MGP_CBAJ_G0024887.1 mouse_genomes_project 19 47652958 47721222 + MGP_CBAJ_P0051544 Pax2 protein_coding protein_coding MGP_CBAJ_T0050685.1 MGP_CBAJ_G0024544.1 mouse_genomes_project 19 7746774 7764889 + MGP_CBAJ_P0050685 Fads3 protein_coding protein_coding MGP_CBAJ_T0051374.1 MGP_CBAJ_G0024828.1 mouse_genomes_project 19 43262265 43336726 - MGP_CBAJ_P0051374 Blnk protein_coding protein_coding MGP_CBAJ_T0051375.1 MGP_CBAJ_G0024828.1 mouse_genomes_project 19 43262265 43336339 - MGP_CBAJ_P0051375 Blnk protein_coding protein_coding MGP_CBAJ_T0051376.1 MGP_CBAJ_G0024828.1 mouse_genomes_project 19 43301716 43336726 - Blnk protein_coding retained_intron MGP_CBAJ_T0013219.1 MGP_CBAJ_G0011331.1 mouse_genomes_project 19 57992941 57993361 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0050471.1 MGP_CBAJ_G0024478.1 mouse_genomes_project 19 4156480 4168653 - MGP_CBAJ_P0050471 Kcnk4 protein_coding protein_coding MGP_CBAJ_T0050619.1 MGP_CBAJ_G0024518.1 mouse_genomes_project 19 6323576 6325901 + MGP_CBAJ_P0050619 Zbtb3 protein_coding protein_coding MGP_CBAJ_T0051330.1 MGP_CBAJ_G0024817.1 mouse_genomes_project 19 42205765 42230894 + MGP_CBAJ_P0051330 protein_coding protein_coding MGP_CBAJ_T0051158.1 MGP_CBAJ_G0024748.1 mouse_genomes_project 19 32900121 32990291 - MGP_CBAJ_P0051158 Asah2 protein_coding protein_coding MGP_CBAJ_T0051145.1 MGP_CBAJ_G0024742.1 mouse_genomes_project 19 30771834 30851503 - MGP_CBAJ_P0051145 Gldc protein_coding protein_coding MGP_CBAJ_T0097798.1 MGP_CBAJ_G0036071.1 mouse_genomes_project 19 15607204 15607761 + pseudogene pseudogene MGP_CBAJ_T0051016.1 MGP_CBAJ_G0024707.1 mouse_genomes_project 19 24638001 24813203 - MGP_CBAJ_P0051016 Pgm5 protein_coding protein_coding MGP_CBAJ_T0051017.1 MGP_CBAJ_G0024707.1 mouse_genomes_project 19 24639536 24722207 - Pgm5 protein_coding processed_transcript MGP_CBAJ_T0051018.1 MGP_CBAJ_G0024707.1 mouse_genomes_project 19 24774387 24813035 - Pgm5 protein_coding retained_intron MGP_CBAJ_T0051019.1 MGP_CBAJ_G0024707.1 mouse_genomes_project 19 24774488 24813000 - Pgm5 protein_coding retained_intron MGP_CBAJ_T0050981.1 MGP_CBAJ_G0024689.1 mouse_genomes_project 19 20906674 20999913 - MGP_CBAJ_P0050981 Gda protein_coding protein_coding MGP_CBAJ_T0050982.1 MGP_CBAJ_G0024689.1 mouse_genomes_project 19 20934315 20999904 - Gda protein_coding retained_intron MGP_CBAJ_T0050940.1 MGP_CBAJ_G0024675.1 mouse_genomes_project 19 16238768 16262256 - MGP_CBAJ_P0050940 Gcnt1 protein_coding protein_coding MGP_CBAJ_T0050941.1 MGP_CBAJ_G0024675.1 mouse_genomes_project 19 16242594 16284517 - MGP_CBAJ_P0050941 Gcnt1 protein_coding protein_coding MGP_CBAJ_T0050942.1 MGP_CBAJ_G0024675.1 mouse_genomes_project 19 16249606 16284517 - Gcnt1 protein_coding retained_intron MGP_CBAJ_T0050325.1 MGP_CBAJ_G0024455.1 mouse_genomes_project 19 3365249 3367832 - MGP_CBAJ_P0050325 Sac3d1 protein_coding protein_coding MGP_CBAJ_T0100309.1 MGP_CBAJ_G0038564.1 mouse_genomes_project 19 6225569 6225644 + Gm25894 snoRNA snoRNA MGP_CBAJ_T0050208.1 MGP_CBAJ_G0024422.1 mouse_genomes_project 19 2722133 2725321 + MGP_CBAJ_P0050208 Ap5b1 protein_coding protein_coding MGP_CBAJ_T0051676.1 MGP_CBAJ_G0024926.1 mouse_genomes_project 19 49947746 49965094 + MGP_CBAJ_P0051676 Borcs7 protein_coding protein_coding MGP_CBAJ_T0010193.1 MGP_CBAJ_G0008331.1 mouse_genomes_project 19 47062880 47062941 + Mir5114 miRNA miRNA MGP_CBAJ_T0050669.1 MGP_CBAJ_G0024536.1 mouse_genomes_project 19 6535521 6629071 + MGP_CBAJ_P0050669 protein_coding protein_coding MGP_CBAJ_T0050652.1 MGP_CBAJ_G0024529.1 mouse_genomes_project 19 6436811 6457855 + MGP_CBAJ_P0050652 Ganab protein_coding protein_coding MGP_CBAJ_T0050653.1 MGP_CBAJ_G0024529.1 mouse_genomes_project 19 6436843 6457861 + MGP_CBAJ_P0050653 Ganab protein_coding unknown_likely_coding MGP_CBAJ_T0051630.1 MGP_CBAJ_G0024913.1 mouse_genomes_project 19 49327473 49469529 + MGP_CBAJ_P0051630 Gbf1 protein_coding protein_coding MGP_CBAJ_T0051631.1 MGP_CBAJ_G0024913.1 mouse_genomes_project 19 49327494 49436250 + Gbf1 protein_coding retained_intron MGP_CBAJ_T0051632.1 MGP_CBAJ_G0024913.1 mouse_genomes_project 19 49327512 49448442 + Gbf1 protein_coding retained_intron MGP_CBAJ_T0051633.1 MGP_CBAJ_G0024913.1 mouse_genomes_project 19 49327537 49426626 + Gbf1 protein_coding processed_transcript MGP_CBAJ_T0051634.1 MGP_CBAJ_G0024913.1 mouse_genomes_project 19 49426526 49469528 + MGP_CBAJ_P0051634 Gbf1 protein_coding protein_coding MGP_CBAJ_T0051635.1 MGP_CBAJ_G0024913.1 mouse_genomes_project 19 49434319 49440019 + MGP_CBAJ_P0051635 Gbf1 protein_coding protein_coding MGP_CBAJ_T0051637.1 MGP_CBAJ_G0024913.1 mouse_genomes_project 19 49449048 49450963 + Gbf1 protein_coding processed_transcript MGP_CBAJ_T0051638.1 MGP_CBAJ_G0024913.1 mouse_genomes_project 19 49449969 49453633 + Gbf1 protein_coding retained_intron MGP_CBAJ_T0051639.1 MGP_CBAJ_G0024913.1 mouse_genomes_project 19 49462891 49464028 + Gbf1 protein_coding retained_intron MGP_CBAJ_T0051640.1 MGP_CBAJ_G0024913.1 mouse_genomes_project 19 49463198 49466701 + MGP_CBAJ_P0051640 Gbf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051641.1 MGP_CBAJ_G0024913.1 mouse_genomes_project 19 49463353 49466504 + Gbf1 protein_coding retained_intron MGP_CBAJ_T0051642.1 MGP_CBAJ_G0024913.1 mouse_genomes_project 19 49465861 49467045 + Gbf1 protein_coding processed_transcript MGP_CBAJ_T0051643.1 MGP_CBAJ_G0024913.1 mouse_genomes_project 19 49466019 49466959 + Gbf1 protein_coding retained_intron MGP_CBAJ_T0051644.1 MGP_CBAJ_G0024913.1 mouse_genomes_project 19 49467581 49468999 + Gbf1 protein_coding retained_intron MGP_CBAJ_T0050452.1 MGP_CBAJ_G0024471.1 mouse_genomes_project 19 3847598 3854810 - MGP_CBAJ_P0050452 Slc22a12 protein_coding protein_coding MGP_CBAJ_T0050453.1 MGP_CBAJ_G0024471.1 mouse_genomes_project 19 3847851 3853336 - Slc22a12 protein_coding processed_transcript MGP_CBAJ_T0050454.1 MGP_CBAJ_G0024471.1 mouse_genomes_project 19 3849523 3854502 - MGP_CBAJ_P0050454 Slc22a12 protein_coding protein_coding MGP_CBAJ_T0050636.1 MGP_CBAJ_G0024523.1 mouse_genomes_project 19 6372556 6375681 + MGP_CBAJ_P0050636 Lrrn4cl protein_coding protein_coding MGP_CBAJ_T0051193.1 MGP_CBAJ_G0024762.1 mouse_genomes_project 19 35375661 35394227 + MGP_CBAJ_P0051193 Lipm protein_coding protein_coding MGP_CBAJ_T0050850.1 MGP_CBAJ_G0024611.1 mouse_genomes_project 19 10277666 10278605 - MGP_CBAJ_P0050850 Olfr262 protein_coding protein_coding MGP_CBAJ_T0010192.1 MGP_CBAJ_G0008330.1 mouse_genomes_project 19 46279143 46279262 + Gm22646 miRNA miRNA MGP_CBAJ_T0050862.1 MGP_CBAJ_G0024621.1 mouse_genomes_project 19 10703973 10735968 + MGP_CBAJ_P0050862 Gm4952 protein_coding protein_coding MGP_CBAJ_T0050863.1 MGP_CBAJ_G0024621.1 mouse_genomes_project 19 10704015 10737346 + MGP_CBAJ_P0050863 Gm4952 protein_coding protein_coding MGP_CBAJ_T0049983.1 MGP_CBAJ_G0024346.1 mouse_genomes_project 19 953714 959992 - MGP_CBAJ_P0049983 Gstp2 protein_coding unknown_likely_coding MGP_CBAJ_T0049984.1 MGP_CBAJ_G0024346.1 mouse_genomes_project 19 953721 960552 - MGP_CBAJ_P0049984 Gstp2 protein_coding protein_coding MGP_CBAJ_T0000984.1 MGP_CBAJ_G0000916.1 mouse_genomes_project 19 39207708 39209456 - TEC TEC MGP_CBAJ_T0050890.1 MGP_CBAJ_G0024636.1 mouse_genomes_project 19 11186872 11187805 + MGP_CBAJ_P0050890 Olfr1451 protein_coding protein_coding MGP_CBAJ_T0006972.1 MGP_CBAJ_G0005722.1 mouse_genomes_project 19 22883271 22884096 + 2410080I02Rik lincRNA lincRNA MGP_CBAJ_T0050900.1 MGP_CBAJ_G0024646.1 mouse_genomes_project 19 11608110 11609043 + MGP_CBAJ_P0050900 Olfr1466 protein_coding protein_coding MGP_CBAJ_T0051065.1 MGP_CBAJ_G0024721.1 mouse_genomes_project 19 28706186 29162013 - MGP_CBAJ_P0051065 Glis3 protein_coding protein_coding MGP_CBAJ_T0051066.1 MGP_CBAJ_G0024721.1 mouse_genomes_project 19 28709682 28780035 - Glis3 protein_coding processed_transcript MGP_CBAJ_T0051067.1 MGP_CBAJ_G0024721.1 mouse_genomes_project 19 28709699 29161602 - MGP_CBAJ_P0051067 Glis3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051068.1 MGP_CBAJ_G0024721.1 mouse_genomes_project 19 28709761 28754567 - Glis3 protein_coding processed_transcript MGP_CBAJ_T0051069.1 MGP_CBAJ_G0024721.1 mouse_genomes_project 19 28710308 29003666 - Glis3 protein_coding retained_intron MGP_CBAJ_T0051070.1 MGP_CBAJ_G0024721.1 mouse_genomes_project 19 28711286 28734295 - Glis3 protein_coding retained_intron MGP_CBAJ_T0051071.1 MGP_CBAJ_G0024721.1 mouse_genomes_project 19 28804120 29162013 - MGP_CBAJ_P0051071 Glis3 protein_coding protein_coding MGP_CBAJ_T0051072.1 MGP_CBAJ_G0024721.1 mouse_genomes_project 19 28995092 29160626 - MGP_CBAJ_P0051072 Glis3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051073.1 MGP_CBAJ_G0024721.1 mouse_genomes_project 19 28995092 29148619 - MGP_CBAJ_P0051073 Glis3 protein_coding protein_coding MGP_CBAJ_T0051074.1 MGP_CBAJ_G0024721.1 mouse_genomes_project 19 28995092 29160626 - MGP_CBAJ_P0051074 Glis3 protein_coding protein_coding MGP_CBAJ_T0050573.1 MGP_CBAJ_G0024513.1 mouse_genomes_project 19 6247532 6248041 + MGP_CBAJ_P0050573 1700092M07Rik protein_coding protein_coding MGP_CBAJ_T0050574.1 MGP_CBAJ_G0024513.1 mouse_genomes_project 19 6247576 6248040 + 1700092M07Rik protein_coding retained_intron MGP_CBAJ_T0099074.1 MGP_CBAJ_G0037329.1 mouse_genomes_project 19 39249955 39250061 + Gm23026 snRNA snRNA MGP_CBAJ_T0050164.1 MGP_CBAJ_G0024409.1 mouse_genomes_project 19 2513047 2517402 - MGP_CBAJ_P0050164 Tsga10ip protein_coding protein_coding MGP_CBAJ_T0050952.1 MGP_CBAJ_G0024679.1 mouse_genomes_project 19 17711953 17721045 + protein_coding retained_intron MGP_CBAJ_T0050953.1 MGP_CBAJ_G0024679.1 mouse_genomes_project 19 17711953 17742952 + MGP_CBAJ_P0050953 protein_coding protein_coding MGP_CBAJ_T0050954.1 MGP_CBAJ_G0024679.1 mouse_genomes_project 19 17711953 17740731 + MGP_CBAJ_P0050954 protein_coding protein_coding MGP_CBAJ_T0050955.1 MGP_CBAJ_G0024679.1 mouse_genomes_project 19 17711962 17725865 + MGP_CBAJ_P0050955 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050956.1 MGP_CBAJ_G0024679.1 mouse_genomes_project 19 17711965 17721952 + protein_coding retained_intron MGP_CBAJ_T0010184.1 MGP_CBAJ_G0008322.1 mouse_genomes_project 19 36186792 36186879 - Mir107 miRNA miRNA MGP_CBAJ_T0011347.1 MGP_CBAJ_G0009485.1 mouse_genomes_project 19 6178452 6178782 - Gm22820 misc_RNA misc_RNA MGP_CBAJ_T0010196.1 MGP_CBAJ_G0008334.1 mouse_genomes_project 19 50646124 50646195 - Mir6995 miRNA miRNA MGP_CBAJ_T0003784.1 MGP_CBAJ_G0003388.1 mouse_genomes_project 19 9399234 9399977 - Gm19261 antisense antisense MGP_CBAJ_T0050757.1 MGP_CBAJ_G0024571.1 mouse_genomes_project 19 8737230 8744855 + MGP_CBAJ_P0050757 Ptgdr2 protein_coding protein_coding MGP_CBAJ_T0013197.1 MGP_CBAJ_G0011309.1 mouse_genomes_project 19 9599936 9600729 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0051657.1 MGP_CBAJ_G0024919.1 mouse_genomes_project 19 49570324 49592441 - MGP_CBAJ_P0051657 Actr1a protein_coding protein_coding MGP_CBAJ_T0050882.1 MGP_CBAJ_G0024628.1 mouse_genomes_project 19 10937052 10977381 + MGP_CBAJ_P0050882 Lpxn protein_coding protein_coding MGP_CBAJ_T0051250.1 MGP_CBAJ_G0024785.1 mouse_genomes_project 19 38615938 38618003 - MGP_CBAJ_P0051250 Fgfbp3 protein_coding protein_coding MGP_CBAJ_T0051116.1 MGP_CBAJ_G0024735.1 mouse_genomes_project 19 30204579 30249895 - MGP_CBAJ_P0051116 Ermp1 protein_coding protein_coding MGP_CBAJ_T0051117.1 MGP_CBAJ_G0024735.1 mouse_genomes_project 19 30204583 30210976 - Ermp1 protein_coding processed_transcript MGP_CBAJ_T0051118.1 MGP_CBAJ_G0024735.1 mouse_genomes_project 19 30208942 30249667 - MGP_CBAJ_P0051118 Ermp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051119.1 MGP_CBAJ_G0024735.1 mouse_genomes_project 19 30211147 30247507 - MGP_CBAJ_P0051119 Ermp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051120.1 MGP_CBAJ_G0024735.1 mouse_genomes_project 19 30211362 30211965 - Ermp1 protein_coding retained_intron MGP_CBAJ_T0051121.1 MGP_CBAJ_G0024735.1 mouse_genomes_project 19 30225798 30240690 - Ermp1 protein_coding processed_transcript MGP_CBAJ_T0051122.1 MGP_CBAJ_G0024735.1 mouse_genomes_project 19 30226748 30249870 - Ermp1 protein_coding retained_intron MGP_CBAJ_T0051123.1 MGP_CBAJ_G0024735.1 mouse_genomes_project 19 30246189 30249858 - Ermp1 protein_coding retained_intron MGP_CBAJ_T0051515.1 MGP_CBAJ_G0024875.1 mouse_genomes_project 19 46850876 46877897 - MGP_CBAJ_P0051515 Cwf19l1 protein_coding protein_coding MGP_CBAJ_T0051540.1 MGP_CBAJ_G0024886.1 mouse_genomes_project 19 47422354 47423459 + Hif1an protein_coding retained_intron MGP_CBAJ_T0051541.1 MGP_CBAJ_G0024886.1 mouse_genomes_project 19 47422354 47435766 + MGP_CBAJ_P0051541 Hif1an protein_coding protein_coding MGP_CBAJ_T0050673.1 MGP_CBAJ_G0024539.1 mouse_genomes_project 19 7520866 7526111 + MGP_CBAJ_P0050673 Scgb2a2 protein_coding protein_coding MGP_CBAJ_T0050902.1 MGP_CBAJ_G0024648.1 mouse_genomes_project 19 11686531 11687461 + MGP_CBAJ_P0050902 Olfr1469 protein_coding protein_coding MGP_CBAJ_T0050913.1 MGP_CBAJ_G0024659.1 mouse_genomes_project 19 12156442 12157390 + MGP_CBAJ_P0050913 Olfr1494 protein_coding protein_coding MGP_CBAJ_T0050109.1 MGP_CBAJ_G0024380.1 mouse_genomes_project 19 1851463 1865369 - MGP_CBAJ_P0050109 Ccs protein_coding protein_coding MGP_CBAJ_T0050090.1 MGP_CBAJ_G0024374.1 mouse_genomes_project 19 1632425 1711904 - MGP_CBAJ_P0050090 Gm960 protein_coding unknown_likely_coding MGP_CBAJ_T0050091.1 MGP_CBAJ_G0024374.1 mouse_genomes_project 19 1632445 1712366 - MGP_CBAJ_P0050091 Gm960 protein_coding protein_coding MGP_CBAJ_T0050092.1 MGP_CBAJ_G0024374.1 mouse_genomes_project 19 1660221 1712013 - MGP_CBAJ_P0050092 Gm960 protein_coding protein_coding MGP_CBAJ_T0051698.1 MGP_CBAJ_G0024941.1 mouse_genomes_project 19 50899257 50954716 - MGP_CBAJ_P0051698 Obfc1 protein_coding protein_coding MGP_CBAJ_T0051699.1 MGP_CBAJ_G0024941.1 mouse_genomes_project 19 50899262 50910368 - Obfc1 protein_coding processed_transcript MGP_CBAJ_T0051700.1 MGP_CBAJ_G0024941.1 mouse_genomes_project 19 50908827 50954633 - MGP_CBAJ_P0051700 Obfc1 protein_coding protein_coding MGP_CBAJ_T0051701.1 MGP_CBAJ_G0024941.1 mouse_genomes_project 19 50934114 50954561 - Obfc1 protein_coding processed_transcript MGP_CBAJ_T0051702.1 MGP_CBAJ_G0024941.1 mouse_genomes_project 19 50936055 50954493 - Obfc1 protein_coding processed_transcript MGP_CBAJ_T0051703.1 MGP_CBAJ_G0024941.1 mouse_genomes_project 19 50936184 50954691 - Obfc1 protein_coding retained_intron MGP_CBAJ_T0051704.1 MGP_CBAJ_G0024941.1 mouse_genomes_project 19 50936709 50955104 - MGP_CBAJ_P0051704 Obfc1 protein_coding protein_coding MGP_CBAJ_T0051705.1 MGP_CBAJ_G0024941.1 mouse_genomes_project 19 50949949 50953859 - Obfc1 protein_coding processed_transcript MGP_CBAJ_T0051706.1 MGP_CBAJ_G0024941.1 mouse_genomes_project 19 50953511 50954643 - Obfc1 protein_coding retained_intron MGP_CBAJ_T0051707.1 MGP_CBAJ_G0024941.1 mouse_genomes_project 19 50953886 50954621 - Obfc1 protein_coding processed_transcript MGP_CBAJ_T0050528.1 MGP_CBAJ_G0024498.1 mouse_genomes_project 19 4717894 4726520 + MGP_CBAJ_P0050528 2700081O15Rik protein_coding protein_coding MGP_CBAJ_T0050529.1 MGP_CBAJ_G0024498.1 mouse_genomes_project 19 4719344 4721715 + 2700081O15Rik protein_coding retained_intron MGP_CBAJ_T0050530.1 MGP_CBAJ_G0024498.1 mouse_genomes_project 19 4720717 4723965 + MGP_CBAJ_P0050530 2700081O15Rik protein_coding protein_coding MGP_CBAJ_T0050531.1 MGP_CBAJ_G0024498.1 mouse_genomes_project 19 4721036 4723299 + MGP_CBAJ_P0050531 2700081O15Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0050532.1 MGP_CBAJ_G0024498.1 mouse_genomes_project 19 4721046 4722951 + MGP_CBAJ_P0050532 2700081O15Rik protein_coding protein_coding MGP_CBAJ_T0050533.1 MGP_CBAJ_G0024498.1 mouse_genomes_project 19 4721654 4726156 + 2700081O15Rik protein_coding retained_intron MGP_CBAJ_T0050912.1 MGP_CBAJ_G0024658.1 mouse_genomes_project 19 12093400 12094360 + MGP_CBAJ_P0050912 Olfr1491 protein_coding protein_coding MGP_CBAJ_T0051322.1 MGP_CBAJ_G0024811.1 mouse_genomes_project 19 41456015 41524588 - MGP_CBAJ_P0051322 Cyp2c38 protein_coding protein_coding MGP_CBAJ_T0099068.1 MGP_CBAJ_G0037323.1 mouse_genomes_project 19 25523162 25523266 - Gm26207 snRNA snRNA MGP_CBAJ_T0051716.1 MGP_CBAJ_G0024944.1 mouse_genomes_project 19 51148357 51152076 + MGP_CBAJ_P0051716 Sfr1 protein_coding protein_coding MGP_CBAJ_T0013207.1 MGP_CBAJ_G0011319.1 mouse_genomes_project 19 25911963 25912957 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0050394.1 MGP_CBAJ_G0024467.1 mouse_genomes_project 19 3640448 3654981 + MGP_CBAJ_P0050394 Sf1 protein_coding protein_coding MGP_CBAJ_T0050395.1 MGP_CBAJ_G0024467.1 mouse_genomes_project 19 3640477 3654171 + MGP_CBAJ_P0050395 Sf1 protein_coding protein_coding MGP_CBAJ_T0050396.1 MGP_CBAJ_G0024467.1 mouse_genomes_project 19 3640568 3653480 + MGP_CBAJ_P0050396 Sf1 protein_coding protein_coding MGP_CBAJ_T0050397.1 MGP_CBAJ_G0024467.1 mouse_genomes_project 19 3640680 3642717 + Sf1 protein_coding retained_intron MGP_CBAJ_T0050398.1 MGP_CBAJ_G0024467.1 mouse_genomes_project 19 3640680 3654170 + MGP_CBAJ_P0050398 Sf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050399.1 MGP_CBAJ_G0024467.1 mouse_genomes_project 19 3640680 3654164 + MGP_CBAJ_P0050399 Sf1 protein_coding protein_coding MGP_CBAJ_T0050400.1 MGP_CBAJ_G0024467.1 mouse_genomes_project 19 3640721 3645543 + Sf1 protein_coding retained_intron MGP_CBAJ_T0050401.1 MGP_CBAJ_G0024467.1 mouse_genomes_project 19 3640952 3649163 + MGP_CBAJ_P0050401 Sf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050402.1 MGP_CBAJ_G0024467.1 mouse_genomes_project 19 3641315 3649589 + MGP_CBAJ_P0050402 Sf1 protein_coding protein_coding MGP_CBAJ_T0050403.1 MGP_CBAJ_G0024467.1 mouse_genomes_project 19 3646877 3649062 + Sf1 protein_coding processed_transcript MGP_CBAJ_T0050404.1 MGP_CBAJ_G0024467.1 mouse_genomes_project 19 3647474 3648664 + Sf1 protein_coding retained_intron MGP_CBAJ_T0050405.1 MGP_CBAJ_G0024467.1 mouse_genomes_project 19 3649382 3649890 + Sf1 protein_coding retained_intron MGP_CBAJ_T0050406.1 MGP_CBAJ_G0024467.1 mouse_genomes_project 19 3650588 3653622 + MGP_CBAJ_P0050406 Sf1 protein_coding protein_coding MGP_CBAJ_T0050407.1 MGP_CBAJ_G0024467.1 mouse_genomes_project 19 3650977 3653480 + MGP_CBAJ_P0050407 Sf1 protein_coding protein_coding MGP_CBAJ_T0050408.1 MGP_CBAJ_G0024467.1 mouse_genomes_project 19 3651096 3652748 + MGP_CBAJ_P0050408 Sf1 protein_coding protein_coding MGP_CBAJ_T0003767.1 MGP_CBAJ_G0003378.1 mouse_genomes_project 19 1823954 1828227 + Gm21844 antisense antisense MGP_CBAJ_T0051666.1 MGP_CBAJ_G0024923.1 mouse_genomes_project 19 49814670 49841705 + MGP_CBAJ_P0051666 Sfxn2 protein_coding protein_coding MGP_CBAJ_T0050064.1 MGP_CBAJ_G0024367.1 mouse_genomes_project 19 1282535 1378524 - MGP_CBAJ_P0050064 Kdm2a protein_coding protein_coding MGP_CBAJ_T0050065.1 MGP_CBAJ_G0024367.1 mouse_genomes_project 19 1284284 1377299 - MGP_CBAJ_P0050065 Kdm2a protein_coding protein_coding MGP_CBAJ_T0050066.1 MGP_CBAJ_G0024367.1 mouse_genomes_project 19 1290697 1296027 - MGP_CBAJ_P0050066 Kdm2a protein_coding nonsense_mediated_decay MGP_CBAJ_T0050067.1 MGP_CBAJ_G0024367.1 mouse_genomes_project 19 1291620 1296282 - Kdm2a protein_coding retained_intron MGP_CBAJ_T0050068.1 MGP_CBAJ_G0024367.1 mouse_genomes_project 19 1298384 1309046 - MGP_CBAJ_P0050068 Kdm2a protein_coding protein_coding MGP_CBAJ_T0050069.1 MGP_CBAJ_G0024367.1 mouse_genomes_project 19 1302652 1308964 - MGP_CBAJ_P0050069 Kdm2a protein_coding nonsense_mediated_decay MGP_CBAJ_T0050070.1 MGP_CBAJ_G0024367.1 mouse_genomes_project 19 1316409 1377302 - MGP_CBAJ_P0050070 Kdm2a protein_coding protein_coding MGP_CBAJ_T0050071.1 MGP_CBAJ_G0024367.1 mouse_genomes_project 19 1323050 1377298 - Kdm2a protein_coding retained_intron MGP_CBAJ_T0050072.1 MGP_CBAJ_G0024367.1 mouse_genomes_project 19 1325002 1341008 - MGP_CBAJ_P0050072 Kdm2a protein_coding protein_coding MGP_CBAJ_T0050073.1 MGP_CBAJ_G0024367.1 mouse_genomes_project 19 1325416 1377290 - Kdm2a protein_coding retained_intron MGP_CBAJ_T0050074.1 MGP_CBAJ_G0024367.1 mouse_genomes_project 19 1369050 1377299 - MGP_CBAJ_P0050074 Kdm2a protein_coding protein_coding MGP_CBAJ_T0050075.1 MGP_CBAJ_G0024367.1 mouse_genomes_project 19 1372690 1377317 - Kdm2a protein_coding retained_intron MGP_CBAJ_T0050962.1 MGP_CBAJ_G0024683.1 mouse_genomes_project 19 18074313 18151309 - MGP_CBAJ_P0050962 Rorb protein_coding protein_coding MGP_CBAJ_T0050963.1 MGP_CBAJ_G0024683.1 mouse_genomes_project 19 18083379 18273468 - MGP_CBAJ_P0050963 Rorb protein_coding protein_coding MGP_CBAJ_T0050964.1 MGP_CBAJ_G0024683.1 mouse_genomes_project 19 18121376 18151292 - Rorb protein_coding retained_intron MGP_CBAJ_T0050965.1 MGP_CBAJ_G0024683.1 mouse_genomes_project 19 18121394 18151303 - Rorb protein_coding retained_intron MGP_CBAJ_T0050039.1 MGP_CBAJ_G0024362.1 mouse_genomes_project 19 1159195 1168469 + MGP_CBAJ_P0050039 Clcf1 protein_coding protein_coding MGP_CBAJ_T0050040.1 MGP_CBAJ_G0024362.1 mouse_genomes_project 19 1159221 1168469 + Clcf1 protein_coding retained_intron MGP_CBAJ_T0050041.1 MGP_CBAJ_G0024362.1 mouse_genomes_project 19 1159262 1168469 + MGP_CBAJ_P0050041 Clcf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050042.1 MGP_CBAJ_G0024362.1 mouse_genomes_project 19 1159551 1167492 + Clcf1 protein_coding processed_transcript MGP_CBAJ_T0050256.1 MGP_CBAJ_G0024438.1 mouse_genomes_project 19 3104685 3128150 - MGP_CBAJ_P0050256 Dpf2 protein_coding protein_coding MGP_CBAJ_T0050257.1 MGP_CBAJ_G0024438.1 mouse_genomes_project 19 3105556 3128071 - MGP_CBAJ_P0050257 Dpf2 protein_coding protein_coding MGP_CBAJ_T0050258.1 MGP_CBAJ_G0024438.1 mouse_genomes_project 19 3105556 3118551 - MGP_CBAJ_P0050258 Dpf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050259.1 MGP_CBAJ_G0024438.1 mouse_genomes_project 19 3110237 3114824 - Dpf2 protein_coding retained_intron MGP_CBAJ_T0050260.1 MGP_CBAJ_G0024438.1 mouse_genomes_project 19 3110815 3113933 - Dpf2 protein_coding retained_intron MGP_CBAJ_T0050261.1 MGP_CBAJ_G0024438.1 mouse_genomes_project 19 3115638 3128056 - Dpf2 protein_coding retained_intron MGP_CBAJ_T0050262.1 MGP_CBAJ_G0024438.1 mouse_genomes_project 19 3116617 3128048 - Dpf2 protein_coding retained_intron MGP_CBAJ_T0050263.1 MGP_CBAJ_G0024438.1 mouse_genomes_project 19 3117028 3128289 - Dpf2 protein_coding processed_transcript MGP_CBAJ_T0050264.1 MGP_CBAJ_G0024438.1 mouse_genomes_project 19 3127104 3128086 - Dpf2 protein_coding processed_transcript MGP_CBAJ_T0050559.1 MGP_CBAJ_G0024508.1 mouse_genomes_project 19 6082554 6103092 + MGP_CBAJ_P0050559 Slc22a8 protein_coding protein_coding MGP_CBAJ_T0050560.1 MGP_CBAJ_G0024508.1 mouse_genomes_project 19 6082554 6103092 + MGP_CBAJ_P0050560 Slc22a8 protein_coding protein_coding MGP_CBAJ_T0050878.1 MGP_CBAJ_G0024626.1 mouse_genomes_project 19 10895524 10934575 - MGP_CBAJ_P0050878 Zfp91 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050880.1 MGP_CBAJ_G0024626.1 mouse_genomes_project 19 10898885 10934575 - MGP_CBAJ_P0050880 Zfp91 protein_coding protein_coding MGP_CBAJ_T0050881.1 MGP_CBAJ_G0024626.1 mouse_genomes_project 19 10906217 10927185 - Zfp91 protein_coding retained_intron MGP_CBAJ_T0050175.1 MGP_CBAJ_G0024413.1 mouse_genomes_project 19 2591006 2591615 - MGP_CBAJ_P0050175 Ccdc85b protein_coding protein_coding MGP_CBAJ_T0049965.1 MGP_CBAJ_G0024342.1 mouse_genomes_project 19 901033 907793 + MGP_CBAJ_P0049965 Tbx10 protein_coding protein_coding MGP_CBAJ_T0051273.1 MGP_CBAJ_G0024791.1 mouse_genomes_project 19 39209669 39214554 + MGP_CBAJ_P0051273 Hhex protein_coding protein_coding MGP_CBAJ_T0051885.1 MGP_CBAJ_G0024990.1 mouse_genomes_project 19 63603670 63619024 + MGP_CBAJ_P0051885 Pnliprp1 protein_coding protein_coding MGP_CBAJ_T0050565.1 MGP_CBAJ_G0024511.1 mouse_genomes_project 19 6206755 6224420 - MGP_CBAJ_P0050565 Slc3a2 protein_coding protein_coding MGP_CBAJ_T0050566.1 MGP_CBAJ_G0024511.1 mouse_genomes_project 19 6208496 6212551 - MGP_CBAJ_P0050566 Slc3a2 protein_coding protein_coding MGP_CBAJ_T0050567.1 MGP_CBAJ_G0024511.1 mouse_genomes_project 19 6208922 6212552 - MGP_CBAJ_P0050567 Slc3a2 protein_coding protein_coding MGP_CBAJ_T0050568.1 MGP_CBAJ_G0024511.1 mouse_genomes_project 19 6208954 6213629 - MGP_CBAJ_P0050568 Slc3a2 protein_coding protein_coding MGP_CBAJ_T0050569.1 MGP_CBAJ_G0024511.1 mouse_genomes_project 19 6212350 6224523 - Slc3a2 protein_coding retained_intron MGP_CBAJ_T0050570.1 MGP_CBAJ_G0024511.1 mouse_genomes_project 19 6212604 6213292 - MGP_CBAJ_P0050570 Slc3a2 protein_coding protein_coding MGP_CBAJ_T0050571.1 MGP_CBAJ_G0024511.1 mouse_genomes_project 19 6212615 6213379 - MGP_CBAJ_P0050571 Slc3a2 protein_coding protein_coding MGP_CBAJ_T0051286.1 MGP_CBAJ_G0024799.1 mouse_genomes_project 19 39998689 40061807 + MGP_CBAJ_P0051286 Pde6c protein_coding protein_coding MGP_CBAJ_T0051287.1 MGP_CBAJ_G0024799.1 mouse_genomes_project 19 39998689 40061807 + MGP_CBAJ_P0051287 Pde6c protein_coding protein_coding MGP_CBAJ_T0051288.1 MGP_CBAJ_G0024799.1 mouse_genomes_project 19 39998854 40061599 + MGP_CBAJ_P0051288 Pde6c protein_coding unknown_likely_coding MGP_CBAJ_T0051124.1 MGP_CBAJ_G0024736.1 mouse_genomes_project 19 30298674 30309171 + MGP_CBAJ_P0051124 Mlana protein_coding protein_coding MGP_CBAJ_T0010180.1 MGP_CBAJ_G0008318.1 mouse_genomes_project 19 30958052 30958129 - Gm24108 miRNA miRNA MGP_CBAJ_T0099066.1 MGP_CBAJ_G0037321.1 mouse_genomes_project 19 16854317 16854420 - Gm22880 snRNA snRNA MGP_CBAJ_T0099078.1 MGP_CBAJ_G0037333.1 mouse_genomes_project 19 50389291 50389398 + Gm23140 snRNA snRNA MGP_CBAJ_T0050820.1 MGP_CBAJ_G0024593.1 mouse_genomes_project 19 9507990 9516124 - MGP_CBAJ_P0050820 Ms4a2 protein_coding protein_coding MGP_CBAJ_T0050821.1 MGP_CBAJ_G0024593.1 mouse_genomes_project 19 9509424 9516159 - MGP_CBAJ_P0050821 Ms4a2 protein_coding protein_coding MGP_CBAJ_T0050822.1 MGP_CBAJ_G0024593.1 mouse_genomes_project 19 9509660 9516083 - MGP_CBAJ_P0050822 Ms4a2 protein_coding protein_coding MGP_CBAJ_T0050823.1 MGP_CBAJ_G0024593.1 mouse_genomes_project 19 9509940 9516099 - MGP_CBAJ_P0050823 Ms4a2 protein_coding protein_coding MGP_CBAJ_T0050824.1 MGP_CBAJ_G0024593.1 mouse_genomes_project 19 9511397 9516128 - Ms4a2 protein_coding processed_transcript MGP_CBAJ_T0049941.1 MGP_CBAJ_G0024335.1 mouse_genomes_project 19 768972 779919 - Tcirg1 protein_coding retained_intron MGP_CBAJ_T0049942.1 MGP_CBAJ_G0024335.1 mouse_genomes_project 19 768972 782137 - MGP_CBAJ_P0049942 Tcirg1 protein_coding protein_coding MGP_CBAJ_T0049943.1 MGP_CBAJ_G0024335.1 mouse_genomes_project 19 768972 784040 - MGP_CBAJ_P0049943 Tcirg1 protein_coding protein_coding MGP_CBAJ_T0049944.1 MGP_CBAJ_G0024335.1 mouse_genomes_project 19 768972 783898 - MGP_CBAJ_P0049944 Tcirg1 protein_coding protein_coding MGP_CBAJ_T0049945.1 MGP_CBAJ_G0024335.1 mouse_genomes_project 19 768972 784019 - MGP_CBAJ_P0049945 Tcirg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049946.1 MGP_CBAJ_G0024335.1 mouse_genomes_project 19 769192 778870 - MGP_CBAJ_P0049946 Tcirg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049947.1 MGP_CBAJ_G0024335.1 mouse_genomes_project 19 769322 770153 - Tcirg1 protein_coding retained_intron MGP_CBAJ_T0049948.1 MGP_CBAJ_G0024335.1 mouse_genomes_project 19 769993 770754 - Tcirg1 protein_coding retained_intron MGP_CBAJ_T0049949.1 MGP_CBAJ_G0024335.1 mouse_genomes_project 19 771642 780202 - MGP_CBAJ_P0049949 Tcirg1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049950.1 MGP_CBAJ_G0024335.1 mouse_genomes_project 19 779089 780093 - Tcirg1 protein_coding retained_intron MGP_CBAJ_T0049951.1 MGP_CBAJ_G0024335.1 mouse_genomes_project 19 779340 783947 - Tcirg1 protein_coding retained_intron MGP_CBAJ_T0049952.1 MGP_CBAJ_G0024335.1 mouse_genomes_project 19 779540 781268 - Tcirg1 protein_coding retained_intron MGP_CBAJ_T0051021.1 MGP_CBAJ_G0024709.1 mouse_genomes_project 19 24871554 24930654 - MGP_CBAJ_P0051021 Cbwd1 protein_coding protein_coding MGP_CBAJ_T0050284.1 MGP_CBAJ_G0024448.1 mouse_genomes_project 19 3300775 3308591 - MGP_CBAJ_P0050284 Tm7sf2 protein_coding protein_coding MGP_CBAJ_T0050285.1 MGP_CBAJ_G0024448.1 mouse_genomes_project 19 3300775 3308630 - MGP_CBAJ_P0050285 Tm7sf2 protein_coding protein_coding MGP_CBAJ_T0050286.1 MGP_CBAJ_G0024448.1 mouse_genomes_project 19 3300776 3308630 - MGP_CBAJ_P0050286 Tm7sf2 protein_coding protein_coding MGP_CBAJ_T0050287.1 MGP_CBAJ_G0024448.1 mouse_genomes_project 19 3300855 3308591 - MGP_CBAJ_P0050287 Tm7sf2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050288.1 MGP_CBAJ_G0024448.1 mouse_genomes_project 19 3300932 3308596 - MGP_CBAJ_P0050288 Tm7sf2 protein_coding protein_coding MGP_CBAJ_T0050289.1 MGP_CBAJ_G0024448.1 mouse_genomes_project 19 3301776 3308573 - MGP_CBAJ_P0050289 Tm7sf2 protein_coding protein_coding MGP_CBAJ_T0050290.1 MGP_CBAJ_G0024448.1 mouse_genomes_project 19 3302047 3308596 - MGP_CBAJ_P0050290 Tm7sf2 protein_coding protein_coding MGP_CBAJ_T0050291.1 MGP_CBAJ_G0024448.1 mouse_genomes_project 19 3306308 3308564 - Tm7sf2 protein_coding retained_intron MGP_CBAJ_T0050292.1 MGP_CBAJ_G0024448.1 mouse_genomes_project 19 3306910 3308638 - Tm7sf2 protein_coding retained_intron MGP_CBAJ_T0050293.1 MGP_CBAJ_G0024448.1 mouse_genomes_project 19 3306927 3308655 - Tm7sf2 protein_coding retained_intron MGP_CBAJ_T0050294.1 MGP_CBAJ_G0024448.1 mouse_genomes_project 19 3306966 3307880 - Tm7sf2 protein_coding retained_intron MGP_CBAJ_T0050295.1 MGP_CBAJ_G0024448.1 mouse_genomes_project 19 3306968 3308643 - MGP_CBAJ_P0050295 Tm7sf2 protein_coding protein_coding MGP_CBAJ_T0050296.1 MGP_CBAJ_G0024448.1 mouse_genomes_project 19 3307360 3308349 - Tm7sf2 protein_coding retained_intron MGP_CBAJ_T0050297.1 MGP_CBAJ_G0024448.1 mouse_genomes_project 19 3307950 3309161 - MGP_CBAJ_P0050297 Tm7sf2 protein_coding protein_coding MGP_CBAJ_T0010164.1 MGP_CBAJ_G0008302.1 mouse_genomes_project 19 3623211 3623276 + Mir6989 miRNA miRNA MGP_CBAJ_T0051315.1 MGP_CBAJ_G0024807.1 mouse_genomes_project 19 41062848 41121914 + MGP_CBAJ_P0051315 Cyp2c55 protein_coding protein_coding MGP_CBAJ_T0050654.1 MGP_CBAJ_G0024530.1 mouse_genomes_project 19 6461493 6468301 + MGP_CBAJ_P0050654 B3gat3 protein_coding protein_coding MGP_CBAJ_T0050856.1 MGP_CBAJ_G0024617.1 mouse_genomes_project 19 10516484 10520690 + MGP_CBAJ_P0050856 Pfpl protein_coding protein_coding MGP_CBAJ_T0051011.1 MGP_CBAJ_G0024704.1 mouse_genomes_project 19 24214484 24234419 - MGP_CBAJ_P0051011 Fxn protein_coding nonsense_mediated_decay MGP_CBAJ_T0051012.1 MGP_CBAJ_G0024704.1 mouse_genomes_project 19 24214484 24234456 - MGP_CBAJ_P0051012 Fxn protein_coding protein_coding MGP_CBAJ_T0051013.1 MGP_CBAJ_G0024704.1 mouse_genomes_project 19 24214772 24231970 - Fxn protein_coding retained_intron MGP_CBAJ_T0098300.1 MGP_CBAJ_G0036567.1 mouse_genomes_project 19 60347045 60353160 + Ppnr sense_intronic sense_intronic MGP_CBAJ_T0051393.1 MGP_CBAJ_G0024838.1 mouse_genomes_project 19 44175074 44215853 - MGP_CBAJ_P0051393 Arhgap19 protein_coding protein_coding MGP_CBAJ_T0051394.1 MGP_CBAJ_G0024838.1 mouse_genomes_project 19 44175077 44215890 - MGP_CBAJ_P0051394 Arhgap19 protein_coding protein_coding MGP_CBAJ_T0051395.1 MGP_CBAJ_G0024838.1 mouse_genomes_project 19 44178286 44189834 - MGP_CBAJ_P0051395 Arhgap19 protein_coding protein_coding MGP_CBAJ_T0051396.1 MGP_CBAJ_G0024838.1 mouse_genomes_project 19 44178480 44215853 - MGP_CBAJ_P0051396 Arhgap19 protein_coding protein_coding MGP_CBAJ_T0013217.1 MGP_CBAJ_G0011329.1 mouse_genomes_project 19 49925088 49926095 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0050336.1 MGP_CBAJ_G0024458.1 mouse_genomes_project 19 3399462 3430775 + Batf2 protein_coding processed_transcript MGP_CBAJ_T0050337.1 MGP_CBAJ_G0024458.1 mouse_genomes_project 19 3422740 3430778 + MGP_CBAJ_P0050337 Batf2 protein_coding protein_coding MGP_CBAJ_T0050338.1 MGP_CBAJ_G0024458.1 mouse_genomes_project 19 3422755 3430070 + Batf2 protein_coding retained_intron MGP_CBAJ_T0050339.1 MGP_CBAJ_G0024458.1 mouse_genomes_project 19 3422755 3429669 + Batf2 protein_coding retained_intron MGP_CBAJ_T0050340.1 MGP_CBAJ_G0024458.1 mouse_genomes_project 19 3422761 3430060 + Batf2 protein_coding processed_transcript MGP_CBAJ_T0050341.1 MGP_CBAJ_G0024458.1 mouse_genomes_project 19 3422790 3429669 + Batf2 protein_coding retained_intron MGP_CBAJ_T0051209.1 MGP_CBAJ_G0024770.1 mouse_genomes_project 19 35915417 35935674 - MGP_CBAJ_P0051209 Ifit1bl1 protein_coding protein_coding MGP_CBAJ_T0051210.1 MGP_CBAJ_G0024770.1 mouse_genomes_project 19 35915420 35935142 - MGP_CBAJ_P0051210 Ifit1bl1 protein_coding protein_coding MGP_CBAJ_T0050265.1 MGP_CBAJ_G0024439.1 mouse_genomes_project 19 3133477 3140738 - MGP_CBAJ_P0050265 Cdc42ep2 protein_coding protein_coding MGP_CBAJ_T0007003.1 MGP_CBAJ_G0005743.1 mouse_genomes_project 19 49522999 49526254 + Gm26792 lincRNA lincRNA MGP_CBAJ_T0051371.1 MGP_CBAJ_G0024826.1 mouse_genomes_project 19 43152769 43171431 + MGP_CBAJ_P0051371 Ccnj protein_coding protein_coding MGP_CBAJ_T0051372.1 MGP_CBAJ_G0024826.1 mouse_genomes_project 19 43153245 43171313 + MGP_CBAJ_P0051372 Ccnj protein_coding unknown_likely_coding MGP_CBAJ_T0051009.1 MGP_CBAJ_G0024702.1 mouse_genomes_project 19 23858690 23933048 - MGP_CBAJ_P0051009 Fam189a2 protein_coding protein_coding MGP_CBAJ_T0100311.1 MGP_CBAJ_G0038566.1 mouse_genomes_project 19 6226186 6226262 + Gm24453 snoRNA snoRNA MGP_CBAJ_T0097801.1 MGP_CBAJ_G0036074.1 mouse_genomes_project 19 66105115 66105698 - pseudogene pseudogene MGP_CBAJ_T0050958.1 MGP_CBAJ_G0024681.1 mouse_genomes_project 19 17812541 17817755 + MGP_CBAJ_P0050958 protein_coding protein_coding MGP_CBAJ_T0050959.1 MGP_CBAJ_G0024681.1 mouse_genomes_project 19 17812584 17817755 + MGP_CBAJ_P0050959 protein_coding protein_coding MGP_CBAJ_T0051728.1 MGP_CBAJ_G0024947.1 mouse_genomes_project 19 51323199 51344059 + MGP_CBAJ_P0051728 Gsto2 protein_coding unknown_likely_coding MGP_CBAJ_T0051729.1 MGP_CBAJ_G0024947.1 mouse_genomes_project 19 51327618 51342063 + MGP_CBAJ_P0051729 Gsto2 protein_coding protein_coding MGP_CBAJ_T0051387.1 MGP_CBAJ_G0024836.1 mouse_genomes_project 19 43983654 43986420 + MGP_CBAJ_P0051387 AI606181 protein_coding protein_coding MGP_CBAJ_T0050178.1 MGP_CBAJ_G0024415.1 mouse_genomes_project 19 2599462 2602721 - MGP_CBAJ_P0050178 Ctsw protein_coding protein_coding MGP_CBAJ_T0051010.1 MGP_CBAJ_G0024703.1 mouse_genomes_project 19 24012491 24067424 - MGP_CBAJ_P0051010 Tjp2 protein_coding unknown_likely_coding MGP_CBAJ_T0010157.1 MGP_CBAJ_G0008295.1 mouse_genomes_project 19 44685 44749 + Mir6984 miRNA miRNA MGP_CBAJ_T0051327.1 MGP_CBAJ_G0024814.1 mouse_genomes_project 19 41926424 42066409 - MGP_CBAJ_P0051327 protein_coding protein_coding MGP_CBAJ_T0051780.1 MGP_CBAJ_G0024968.1 mouse_genomes_project 19 59692466 59735742 + MGP_CBAJ_P0051780 Acsl5 protein_coding protein_coding MGP_CBAJ_T0007010.1 MGP_CBAJ_G0005747.1 mouse_genomes_project 19 57620600 57622690 + 4833407H14Rik lincRNA lincRNA MGP_CBAJ_T0100337.1 MGP_CBAJ_G0038592.1 mouse_genomes_project 19 66153076 66153205 - Gm22520 snoRNA snoRNA MGP_CBAJ_T0051836.1 MGP_CBAJ_G0024980.1 mouse_genomes_project 19 61492208 61537557 + MGP_CBAJ_P0051836 Tdrd1 protein_coding protein_coding MGP_CBAJ_T0051837.1 MGP_CBAJ_G0024980.1 mouse_genomes_project 19 61492274 61537557 + MGP_CBAJ_P0051837 Tdrd1 protein_coding protein_coding MGP_CBAJ_T0051838.1 MGP_CBAJ_G0024980.1 mouse_genomes_project 19 61492285 61537557 + MGP_CBAJ_P0051838 Tdrd1 protein_coding protein_coding MGP_CBAJ_T0051839.1 MGP_CBAJ_G0024980.1 mouse_genomes_project 19 61496645 61537557 + MGP_CBAJ_P0051839 Tdrd1 protein_coding protein_coding MGP_CBAJ_T0050719.1 MGP_CBAJ_G0024557.1 mouse_genomes_project 19 8322172 8329046 - MGP_CBAJ_P0050719 Tmem138 protein_coding protein_coding MGP_CBAJ_T0050656.1 MGP_CBAJ_G0024532.1 mouse_genomes_project 19 6470760 6485641 + MGP_CBAJ_P0050656 Eml3 protein_coding protein_coding MGP_CBAJ_T0051665.1 MGP_CBAJ_G0024922.1 mouse_genomes_project 19 49757738 49814391 - MGP_CBAJ_P0051665 Arl3 protein_coding protein_coding MGP_CBAJ_T0013214.1 MGP_CBAJ_G0011326.1 mouse_genomes_project 19 42907066 42907824 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0051677.1 MGP_CBAJ_G0024927.1 mouse_genomes_project 19 49969309 50013067 + MGP_CBAJ_P0051677 As3mt protein_coding protein_coding MGP_CBAJ_T0017423.1 MGP_CBAJ_G0015120.1 mouse_genomes_project 19 3942383 4009063 - 2410152P15Rik processed_transcript processed_transcript MGP_CBAJ_T0051001.1 MGP_CBAJ_G0024695.1 mouse_genomes_project 19 22889863 22918835 + MGP_CBAJ_P0051001 Klf9 protein_coding protein_coding MGP_CBAJ_T0050246.1 MGP_CBAJ_G0024434.1 mouse_genomes_project 19 2945391 2958323 - MGP_CBAJ_P0050246 Scyl1 protein_coding protein_coding MGP_CBAJ_T0013195.1 MGP_CBAJ_G0011307.1 mouse_genomes_project 19 6079714 6080504 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0051667.1 MGP_CBAJ_G0024924.1 mouse_genomes_project 19 49843883 49905250 + MGP_CBAJ_P0051667 Wbp1l protein_coding protein_coding MGP_CBAJ_T0051668.1 MGP_CBAJ_G0024924.1 mouse_genomes_project 19 49843912 49905246 + MGP_CBAJ_P0051668 Wbp1l protein_coding nonsense_mediated_decay MGP_CBAJ_T0051669.1 MGP_CBAJ_G0024924.1 mouse_genomes_project 19 49843913 49905243 + MGP_CBAJ_P0051669 Wbp1l protein_coding protein_coding MGP_CBAJ_T0051670.1 MGP_CBAJ_G0024924.1 mouse_genomes_project 19 49843923 49892627 + Wbp1l protein_coding processed_transcript MGP_CBAJ_T0051671.1 MGP_CBAJ_G0024924.1 mouse_genomes_project 19 49871025 49900389 + Wbp1l protein_coding processed_transcript MGP_CBAJ_T0051672.1 MGP_CBAJ_G0024924.1 mouse_genomes_project 19 49871025 49905246 + MGP_CBAJ_P0051672 Wbp1l protein_coding protein_coding MGP_CBAJ_T0051761.1 MGP_CBAJ_G0024960.1 mouse_genomes_project 19 57869770 58103490 + MGP_CBAJ_P0051761 Rbm20 protein_coding protein_coding MGP_CBAJ_T0051762.1 MGP_CBAJ_G0024960.1 mouse_genomes_project 19 57869770 58080242 + MGP_CBAJ_P0051762 Rbm20 protein_coding protein_coding MGP_CBAJ_T0051763.1 MGP_CBAJ_G0024960.1 mouse_genomes_project 19 58024430 58047423 + Rbm20 protein_coding processed_transcript MGP_CBAJ_T0051764.1 MGP_CBAJ_G0024960.1 mouse_genomes_project 19 58079688 58103490 + MGP_CBAJ_P0051764 Rbm20 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050737.1 MGP_CBAJ_G0024567.1 mouse_genomes_project 19 8635128 8650799 - MGP_CBAJ_P0050737 Tmem132a protein_coding protein_coding MGP_CBAJ_T0050738.1 MGP_CBAJ_G0024567.1 mouse_genomes_project 19 8635140 8650637 - MGP_CBAJ_P0050738 Tmem132a protein_coding protein_coding MGP_CBAJ_T0050121.1 MGP_CBAJ_G0024386.1 mouse_genomes_project 19 1951840 1972692 - MGP_CBAJ_P0050121 Dpp3 protein_coding protein_coding MGP_CBAJ_T0051531.1 MGP_CBAJ_G0024885.1 mouse_genomes_project 19 47404015 47410870 - MGP_CBAJ_P0051531 Ndufb8 protein_coding protein_coding MGP_CBAJ_T0051532.1 MGP_CBAJ_G0024885.1 mouse_genomes_project 19 47405683 47410884 - MGP_CBAJ_P0051532 Ndufb8 protein_coding protein_coding MGP_CBAJ_T0051533.1 MGP_CBAJ_G0024885.1 mouse_genomes_project 19 47405696 47410863 - MGP_CBAJ_P0051533 Ndufb8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051534.1 MGP_CBAJ_G0024885.1 mouse_genomes_project 19 47405698 47408324 - Ndufb8 protein_coding retained_intron MGP_CBAJ_T0051535.1 MGP_CBAJ_G0024885.1 mouse_genomes_project 19 47408065 47410430 - MGP_CBAJ_P0051535 Ndufb8 protein_coding protein_coding MGP_CBAJ_T0051536.1 MGP_CBAJ_G0024885.1 mouse_genomes_project 19 47408283 47410848 - MGP_CBAJ_P0051536 Ndufb8 protein_coding protein_coding MGP_CBAJ_T0051537.1 MGP_CBAJ_G0024885.1 mouse_genomes_project 19 47408718 47410849 - Ndufb8 protein_coding retained_intron MGP_CBAJ_T0051538.1 MGP_CBAJ_G0024885.1 mouse_genomes_project 19 47410144 47410870 - Ndufb8 protein_coding retained_intron MGP_CBAJ_T0051539.1 MGP_CBAJ_G0024885.1 mouse_genomes_project 19 47410158 47410867 - Ndufb8 protein_coding retained_intron MGP_CBAJ_T0050889.1 MGP_CBAJ_G0024635.1 mouse_genomes_project 19 11140827 11141805 + MGP_CBAJ_P0050889 Olfr1450 protein_coding protein_coding MGP_CBAJ_T0051059.1 MGP_CBAJ_G0024719.1 mouse_genomes_project 19 27746830 27784643 - MGP_CBAJ_P0051059 Pum3 protein_coding protein_coding MGP_CBAJ_T0050643.1 MGP_CBAJ_G0024527.1 mouse_genomes_project 19 6419124 6423168 + MGP_CBAJ_P0050643 1810009A15Rik protein_coding protein_coding MGP_CBAJ_T0050645.1 MGP_CBAJ_G0024527.1 mouse_genomes_project 19 6419170 6423033 + 1810009A15Rik protein_coding retained_intron MGP_CBAJ_T0050646.1 MGP_CBAJ_G0024527.1 mouse_genomes_project 19 6419186 6422833 + MGP_CBAJ_P0050646 1810009A15Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0050647.1 MGP_CBAJ_G0024527.1 mouse_genomes_project 19 6419200 6422752 + 1810009A15Rik protein_coding retained_intron MGP_CBAJ_T0050648.1 MGP_CBAJ_G0024527.1 mouse_genomes_project 19 6419210 6423028 + 1810009A15Rik protein_coding retained_intron MGP_CBAJ_T0050915.1 MGP_CBAJ_G0024661.1 mouse_genomes_project 19 12180340 12181412 + MGP_CBAJ_P0050915 protein_coding protein_coding MGP_CBAJ_T0050848.1 MGP_CBAJ_G0024609.1 mouse_genomes_project 19 10105409 10106354 - MGP_CBAJ_P0050848 Olfr1428 protein_coding protein_coding MGP_CBAJ_T0051819.1 MGP_CBAJ_G0024975.1 mouse_genomes_project 19 61059705 61087805 + MGP_CBAJ_P0051819 Plekhs1 protein_coding protein_coding MGP_CBAJ_T0051820.1 MGP_CBAJ_G0024975.1 mouse_genomes_project 19 61059705 61087805 + MGP_CBAJ_P0051820 Plekhs1 protein_coding protein_coding MGP_CBAJ_T0051821.1 MGP_CBAJ_G0024975.1 mouse_genomes_project 19 61062478 61086924 + MGP_CBAJ_P0051821 Plekhs1 protein_coding unknown_likely_coding MGP_CBAJ_T0051201.1 MGP_CBAJ_G0024765.1 mouse_genomes_project 19 35508217 35522445 - MGP_CBAJ_P0051201 Acta2 protein_coding protein_coding MGP_CBAJ_T0050904.1 MGP_CBAJ_G0024650.1 mouse_genomes_project 19 11731447 11750781 + MGP_CBAJ_P0050904 protein_coding protein_coding MGP_CBAJ_T0051091.1 MGP_CBAJ_G0024726.1 mouse_genomes_project 19 29546059 29575365 - MGP_CBAJ_P0051091 Ak3 protein_coding protein_coding MGP_CBAJ_T0051092.1 MGP_CBAJ_G0024726.1 mouse_genomes_project 19 29551127 29552471 - MGP_CBAJ_P0051092 Ak3 protein_coding protein_coding MGP_CBAJ_T0050858.1 MGP_CBAJ_G0024619.1 mouse_genomes_project 19 10551854 10590082 - MGP_CBAJ_P0050858 Dtx4 protein_coding protein_coding MGP_CBAJ_T0003772.1 MGP_CBAJ_G0003380.1 mouse_genomes_project 19 2911330 2915752 + Gm16538 antisense antisense MGP_CBAJ_T0051275.1 MGP_CBAJ_G0024793.1 mouse_genomes_project 19 39493661 39501453 + MGP_CBAJ_P0051275 Cyp26c1 protein_coding protein_coding MGP_CBAJ_T0050214.1 MGP_CBAJ_G0024424.1 mouse_genomes_project 19 2764007 2771085 - MGP_CBAJ_P0050214 Kat5 protein_coding protein_coding MGP_CBAJ_T0051771.1 MGP_CBAJ_G0024964.1 mouse_genomes_project 19 58317377 58321178 + MGP_CBAJ_P0051771 Adra2a protein_coding protein_coding MGP_CBAJ_T0051525.1 MGP_CBAJ_G0024881.1 mouse_genomes_project 19 47220985 47234248 - MGP_CBAJ_P0051525 Scd1 protein_coding protein_coding MGP_CBAJ_T0050527.1 MGP_CBAJ_G0024497.1 mouse_genomes_project 19 4652407 4683198 - MGP_CBAJ_P0050527 AI846148 protein_coding protein_coding MGP_CBAJ_T0010172.1 MGP_CBAJ_G0008310.1 mouse_genomes_project 19 7528631 7528735 + Gm22369 miRNA miRNA MGP_CBAJ_T0051404.1 MGP_CBAJ_G0024844.1 mouse_genomes_project 19 44384507 44432040 - MGP_CBAJ_P0051404 Mms19 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051405.1 MGP_CBAJ_G0024844.1 mouse_genomes_project 19 44384507 44432083 - MGP_CBAJ_P0051405 Mms19 protein_coding protein_coding MGP_CBAJ_T0051406.1 MGP_CBAJ_G0024844.1 mouse_genomes_project 19 44387648 44410198 - Mms19 protein_coding retained_intron MGP_CBAJ_T0051407.1 MGP_CBAJ_G0024844.1 mouse_genomes_project 19 44387652 44420652 - MGP_CBAJ_P0051407 Mms19 protein_coding protein_coding MGP_CBAJ_T0051408.1 MGP_CBAJ_G0024844.1 mouse_genomes_project 19 44387654 44432062 - MGP_CBAJ_P0051408 Mms19 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051409.1 MGP_CBAJ_G0024844.1 mouse_genomes_project 19 44387654 44432043 - MGP_CBAJ_P0051409 Mms19 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051410.1 MGP_CBAJ_G0024844.1 mouse_genomes_project 19 44387820 44432058 - MGP_CBAJ_P0051410 Mms19 protein_coding protein_coding MGP_CBAJ_T0051411.1 MGP_CBAJ_G0024844.1 mouse_genomes_project 19 44387932 44400720 - MGP_CBAJ_P0051411 Mms19 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051412.1 MGP_CBAJ_G0024844.1 mouse_genomes_project 19 44387992 44389071 - Mms19 protein_coding retained_intron MGP_CBAJ_T0051413.1 MGP_CBAJ_G0024844.1 mouse_genomes_project 19 44390231 44432065 - Mms19 protein_coding retained_intron MGP_CBAJ_T0051414.1 MGP_CBAJ_G0024844.1 mouse_genomes_project 19 44390419 44399527 - MGP_CBAJ_P0051414 Mms19 protein_coding protein_coding MGP_CBAJ_T0051415.1 MGP_CBAJ_G0024844.1 mouse_genomes_project 19 44390604 44391672 - Mms19 protein_coding retained_intron MGP_CBAJ_T0051416.1 MGP_CBAJ_G0024844.1 mouse_genomes_project 19 44391114 44432063 - MGP_CBAJ_P0051416 Mms19 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051417.1 MGP_CBAJ_G0024844.1 mouse_genomes_project 19 44395299 44396917 - Mms19 protein_coding retained_intron MGP_CBAJ_T0051418.1 MGP_CBAJ_G0024844.1 mouse_genomes_project 19 44398679 44432056 - MGP_CBAJ_P0051418 Mms19 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051419.1 MGP_CBAJ_G0024844.1 mouse_genomes_project 19 44400038 44400749 - Mms19 protein_coding retained_intron MGP_CBAJ_T0051420.1 MGP_CBAJ_G0024844.1 mouse_genomes_project 19 44408366 44408694 - Mms19 protein_coding retained_intron MGP_CBAJ_T0051421.1 MGP_CBAJ_G0024844.1 mouse_genomes_project 19 44408574 44420671 - MGP_CBAJ_P0051421 Mms19 protein_coding protein_coding MGP_CBAJ_T0051300.1 MGP_CBAJ_G0024803.1 mouse_genomes_project 19 40418545 40473612 + Plce1 protein_coding processed_transcript MGP_CBAJ_T0051301.1 MGP_CBAJ_G0024803.1 mouse_genomes_project 19 40418557 40776731 + MGP_CBAJ_P0051301 Plce1 protein_coding protein_coding MGP_CBAJ_T0051302.1 MGP_CBAJ_G0024803.1 mouse_genomes_project 19 40473742 40778361 + MGP_CBAJ_P0051302 Plce1 protein_coding protein_coding MGP_CBAJ_T0051303.1 MGP_CBAJ_G0024803.1 mouse_genomes_project 19 40473754 40776096 + MGP_CBAJ_P0051303 Plce1 protein_coding protein_coding MGP_CBAJ_T0051304.1 MGP_CBAJ_G0024803.1 mouse_genomes_project 19 40544108 40620980 + MGP_CBAJ_P0051304 Plce1 protein_coding protein_coding MGP_CBAJ_T0051305.1 MGP_CBAJ_G0024803.1 mouse_genomes_project 19 40702655 40776889 + Plce1 protein_coding retained_intron MGP_CBAJ_T0051306.1 MGP_CBAJ_G0024803.1 mouse_genomes_project 19 40716577 40734654 + Plce1 protein_coding retained_intron MGP_CBAJ_T0099062.1 MGP_CBAJ_G0037317.1 mouse_genomes_project 19 10784499 10784606 + Gm24521 snRNA snRNA MGP_CBAJ_T0101767.1 MGP_CBAJ_G0039798.1 mouse_genomes_project 19 9470187 9473852 + unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0051177.1 MGP_CBAJ_G0024753.1 mouse_genomes_project 19 33790057 33868433 + MGP_CBAJ_P0051177 Pten protein_coding protein_coding MGP_CBAJ_T0051178.1 MGP_CBAJ_G0024753.1 mouse_genomes_project 19 33790155 33843780 + Pten protein_coding retained_intron MGP_CBAJ_T0051179.1 MGP_CBAJ_G0024753.1 mouse_genomes_project 19 33852230 33861427 + Pten protein_coding retained_intron MGP_CBAJ_T0050209.1 MGP_CBAJ_G0024423.1 mouse_genomes_project 19 2762863 2764430 + MGP_CBAJ_P0050209 Rnaseh2c protein_coding protein_coding MGP_CBAJ_T0050210.1 MGP_CBAJ_G0024423.1 mouse_genomes_project 19 2762877 2763858 + Rnaseh2c protein_coding retained_intron MGP_CBAJ_T0050211.1 MGP_CBAJ_G0024423.1 mouse_genomes_project 19 2762965 2763923 + Rnaseh2c protein_coding retained_intron MGP_CBAJ_T0050212.1 MGP_CBAJ_G0024423.1 mouse_genomes_project 19 2763225 2763929 + MGP_CBAJ_P0050212 Rnaseh2c protein_coding protein_coding MGP_CBAJ_T0050213.1 MGP_CBAJ_G0024423.1 mouse_genomes_project 19 2763400 2763925 + Rnaseh2c protein_coding retained_intron MGP_CBAJ_T0050849.1 MGP_CBAJ_G0024610.1 mouse_genomes_project 19 10116242 10117290 - MGP_CBAJ_P0050849 Olfr76 protein_coding protein_coding MGP_CBAJ_T0101076.1 MGP_CBAJ_G0039289.1 mouse_genomes_project 19 10992791 10993534 + transcribed_processed_pseudogene processed_transcript MGP_CBAJ_T0101077.1 MGP_CBAJ_G0039289.1 mouse_genomes_project 19 10992975 10993314 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_CBAJ_T0051603.1 MGP_CBAJ_G0024907.1 mouse_genomes_project 19 49143282 49145978 + MGP_CBAJ_P0051603 Hps6 protein_coding protein_coding MGP_CBAJ_T0050013.1 MGP_CBAJ_G0024353.1 mouse_genomes_project 19 1067330 1072537 - MGP_CBAJ_P0050013 Cabp4 protein_coding protein_coding MGP_CBAJ_T0050844.1 MGP_CBAJ_G0024605.1 mouse_genomes_project 19 9908873 9939669 + MGP_CBAJ_P0050844 Osbp protein_coding protein_coding MGP_CBAJ_T0099070.1 MGP_CBAJ_G0037325.1 mouse_genomes_project 19 30662861 30663027 + Gm26046 snRNA snRNA MGP_CBAJ_T0050898.1 MGP_CBAJ_G0024644.1 mouse_genomes_project 19 11451478 11452411 + MGP_CBAJ_P0050898 Olfr1463 protein_coding protein_coding MGP_CBAJ_T0011349.1 MGP_CBAJ_G0009487.1 mouse_genomes_project 19 15921120 15921381 - Gm27796 misc_RNA misc_RNA MGP_CBAJ_T0050035.1 MGP_CBAJ_G0024358.1 mouse_genomes_project 19 1099796 1110952 - MGP_CBAJ_P0050035 Carns1 protein_coding protein_coding MGP_CBAJ_T0051109.1 MGP_CBAJ_G0024734.1 mouse_genomes_project 19 30106427 30203195 + MGP_CBAJ_P0051109 Ric1 protein_coding protein_coding MGP_CBAJ_T0051110.1 MGP_CBAJ_G0024734.1 mouse_genomes_project 19 30106480 30160567 + MGP_CBAJ_P0051110 Ric1 protein_coding protein_coding MGP_CBAJ_T0051111.1 MGP_CBAJ_G0024734.1 mouse_genomes_project 19 30106527 30178432 + Ric1 protein_coding retained_intron MGP_CBAJ_T0051112.1 MGP_CBAJ_G0024734.1 mouse_genomes_project 19 30117063 30200756 + MGP_CBAJ_P0051112 Ric1 protein_coding protein_coding MGP_CBAJ_T0051113.1 MGP_CBAJ_G0024734.1 mouse_genomes_project 19 30192248 30201741 + MGP_CBAJ_P0051113 Ric1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051114.1 MGP_CBAJ_G0024734.1 mouse_genomes_project 19 30193980 30196453 + Ric1 protein_coding retained_intron MGP_CBAJ_T0051115.1 MGP_CBAJ_G0024734.1 mouse_genomes_project 19 30194565 30202452 + MGP_CBAJ_P0051115 Ric1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050279.1 MGP_CBAJ_G0024445.1 mouse_genomes_project 19 3294586 3296433 + MGP_CBAJ_P0050279 protein_coding protein_coding MGP_CBAJ_T0050280.1 MGP_CBAJ_G0024445.1 mouse_genomes_project 19 3294586 3296433 + MGP_CBAJ_P0050280 protein_coding protein_coding MGP_CBAJ_T0050282.1 MGP_CBAJ_G0024445.1 mouse_genomes_project 19 3294665 3296433 + MGP_CBAJ_P0050282 protein_coding protein_coding MGP_CBAJ_T0100316.1 MGP_CBAJ_G0038571.1 mouse_genomes_project 19 6418809 6418957 - Snora57 snoRNA snoRNA MGP_CBAJ_T0050143.1 MGP_CBAJ_G0024397.1 mouse_genomes_project 19 2158976 2165696 - MGP_CBAJ_P0050143 Cnih2 protein_coding protein_coding MGP_CBAJ_T0051159.1 MGP_CBAJ_G0024749.1 mouse_genomes_project 19 33063616 33360283 - MGP_CBAJ_P0051159 Sgms1 protein_coding protein_coding MGP_CBAJ_T0051160.1 MGP_CBAJ_G0024749.1 mouse_genomes_project 19 33063619 33313326 - MGP_CBAJ_P0051160 Sgms1 protein_coding protein_coding MGP_CBAJ_T0051161.1 MGP_CBAJ_G0024749.1 mouse_genomes_project 19 33064368 33155394 - MGP_CBAJ_P0051161 Sgms1 protein_coding protein_coding MGP_CBAJ_T0051162.1 MGP_CBAJ_G0024749.1 mouse_genomes_project 19 33065034 33232212 - MGP_CBAJ_P0051162 Sgms1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051163.1 MGP_CBAJ_G0024749.1 mouse_genomes_project 19 33065036 33105290 - MGP_CBAJ_P0051163 Sgms1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051164.1 MGP_CBAJ_G0024749.1 mouse_genomes_project 19 33103322 33361480 - Sgms1 protein_coding retained_intron MGP_CBAJ_T0051165.1 MGP_CBAJ_G0024749.1 mouse_genomes_project 19 33105127 33147222 - MGP_CBAJ_P0051165 Sgms1 protein_coding protein_coding MGP_CBAJ_T0051166.1 MGP_CBAJ_G0024749.1 mouse_genomes_project 19 33105224 33187505 - Sgms1 protein_coding processed_transcript MGP_CBAJ_T0051167.1 MGP_CBAJ_G0024749.1 mouse_genomes_project 19 33105236 33280675 - Sgms1 protein_coding processed_transcript MGP_CBAJ_T0051168.1 MGP_CBAJ_G0024749.1 mouse_genomes_project 19 33105365 33232186 - Sgms1 protein_coding processed_transcript MGP_CBAJ_T0051169.1 MGP_CBAJ_G0024749.1 mouse_genomes_project 19 33164672 33199335 - Sgms1 protein_coding processed_transcript MGP_CBAJ_T0051170.1 MGP_CBAJ_G0024749.1 mouse_genomes_project 19 33166501 33247407 - Sgms1 protein_coding retained_intron MGP_CBAJ_T0051171.1 MGP_CBAJ_G0024749.1 mouse_genomes_project 19 33169232 33187519 - Sgms1 protein_coding retained_intron MGP_CBAJ_T0051172.1 MGP_CBAJ_G0024749.1 mouse_genomes_project 19 33247106 33360234 - Sgms1 protein_coding retained_intron MGP_CBAJ_T0011353.1 MGP_CBAJ_G0009491.1 mouse_genomes_project 19 34025864 34026223 - Gm22482 misc_RNA misc_RNA MGP_CBAJ_T0051924.1 MGP_CBAJ_G0025010.1 mouse_genomes_project 19 66021966 66238828 + MGP_CBAJ_P0051924 Grk5 protein_coding protein_coding MGP_CBAJ_T0050136.1 MGP_CBAJ_G0024394.1 mouse_genomes_project 19 2132056 2134616 + MGP_CBAJ_P0050136 Cd248 protein_coding protein_coding MGP_CBAJ_T0050894.1 MGP_CBAJ_G0024640.1 mouse_genomes_project 19 11297380 11298286 - MGP_CBAJ_P0050894 Olfr1458 protein_coding protein_coding MGP_CBAJ_T0050038.1 MGP_CBAJ_G0024361.1 mouse_genomes_project 19 1136390 1142796 - MGP_CBAJ_P0050038 Rad9a protein_coding protein_coding MGP_CBAJ_T0050255.1 MGP_CBAJ_G0024437.1 mouse_genomes_project 19 3099313 3102282 - MGP_CBAJ_P0050255 Tigd3 protein_coding protein_coding MGP_CBAJ_T0051765.1 MGP_CBAJ_G0024961.1 mouse_genomes_project 19 58129717 58180698 + MGP_CBAJ_P0051765 Pdcd4 protein_coding protein_coding MGP_CBAJ_T0051766.1 MGP_CBAJ_G0024961.1 mouse_genomes_project 19 58140850 58180698 + MGP_CBAJ_P0051766 Pdcd4 protein_coding protein_coding MGP_CBAJ_T0051767.1 MGP_CBAJ_G0024961.1 mouse_genomes_project 19 58140850 58180698 + MGP_CBAJ_P0051767 Pdcd4 protein_coding protein_coding MGP_CBAJ_T0051447.1 MGP_CBAJ_G0024857.1 mouse_genomes_project 19 45009233 45083253 + MGP_CBAJ_P0051447 R3hcc1l protein_coding protein_coding MGP_CBAJ_T0051448.1 MGP_CBAJ_G0024857.1 mouse_genomes_project 19 45009272 45081926 + MGP_CBAJ_P0051448 R3hcc1l protein_coding protein_coding MGP_CBAJ_T0051449.1 MGP_CBAJ_G0024857.1 mouse_genomes_project 19 45009296 45064717 + MGP_CBAJ_P0051449 R3hcc1l protein_coding protein_coding MGP_CBAJ_T0051450.1 MGP_CBAJ_G0024857.1 mouse_genomes_project 19 45053053 45065286 + R3hcc1l protein_coding retained_intron MGP_CBAJ_T0051451.1 MGP_CBAJ_G0024857.1 mouse_genomes_project 19 45072074 45075670 + R3hcc1l protein_coding retained_intron MGP_CBAJ_T0050960.1 MGP_CBAJ_G0024682.1 mouse_genomes_project 19 17853481 18033482 + MGP_CBAJ_P0050960 Trpm6 protein_coding protein_coding MGP_CBAJ_T0050961.1 MGP_CBAJ_G0024682.1 mouse_genomes_project 19 17853529 18033109 + MGP_CBAJ_P0050961 Trpm6 protein_coding unknown_likely_coding MGP_CBAJ_T0049901.1 MGP_CBAJ_G0024330.1 mouse_genomes_project 19 236794 371880 - MGP_CBAJ_P0049901 Ppp6r3 protein_coding unknown_likely_coding MGP_CBAJ_T0049902.1 MGP_CBAJ_G0024330.1 mouse_genomes_project 19 236798 371902 - MGP_CBAJ_P0049902 Ppp6r3 protein_coding protein_coding MGP_CBAJ_T0049903.1 MGP_CBAJ_G0024330.1 mouse_genomes_project 19 236798 371902 - MGP_CBAJ_P0049903 Ppp6r3 protein_coding protein_coding MGP_CBAJ_T0049904.1 MGP_CBAJ_G0024330.1 mouse_genomes_project 19 236798 371902 - MGP_CBAJ_P0049904 Ppp6r3 protein_coding protein_coding MGP_CBAJ_T0097795.1 MGP_CBAJ_G0036068.1 mouse_genomes_project 19 11203790 11204722 + pseudogene pseudogene MGP_CBAJ_T0050534.1 MGP_CBAJ_G0024499.1 mouse_genomes_project 19 4726516 4783533 - MGP_CBAJ_P0050534 Rtn3 protein_coding protein_coding MGP_CBAJ_T0050535.1 MGP_CBAJ_G0024499.1 mouse_genomes_project 19 4726516 4783533 - MGP_CBAJ_P0050535 Rtn3 protein_coding protein_coding MGP_CBAJ_T0050536.1 MGP_CBAJ_G0024499.1 mouse_genomes_project 19 4726516 4783525 - MGP_CBAJ_P0050536 Rtn3 protein_coding protein_coding MGP_CBAJ_T0050537.1 MGP_CBAJ_G0024499.1 mouse_genomes_project 19 4727642 4783463 - MGP_CBAJ_P0050537 Rtn3 protein_coding protein_coding MGP_CBAJ_T0101290.1 MGP_CBAJ_G0039407.1 mouse_genomes_project 19 63572790 63573204 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101291.1 MGP_CBAJ_G0039407.1 mouse_genomes_project 19 63572790 63575197 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101292.1 MGP_CBAJ_G0039407.1 mouse_genomes_project 19 63572955 63589599 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0051227.1 MGP_CBAJ_G0024779.1 mouse_genomes_project 19 37654158 37677379 + MGP_CBAJ_P0051227 Rpp30 protein_coding protein_coding MGP_CBAJ_T0050465.1 MGP_CBAJ_G0024476.1 mouse_genomes_project 19 4137716 4152233 - MGP_CBAJ_P0050465 protein_coding unknown_likely_coding MGP_CBAJ_T0050466.1 MGP_CBAJ_G0024476.1 mouse_genomes_project 19 4139131 4152487 - MGP_CBAJ_P0050466 protein_coding protein_coding MGP_CBAJ_T0050467.1 MGP_CBAJ_G0024476.1 mouse_genomes_project 19 4139444 4152539 - protein_coding processed_transcript MGP_CBAJ_T0050468.1 MGP_CBAJ_G0024476.1 mouse_genomes_project 19 4150628 4152493 - protein_coding retained_intron MGP_CBAJ_T0050469.1 MGP_CBAJ_G0024476.1 mouse_genomes_project 19 4150803 4151777 - MGP_CBAJ_P0050469 protein_coding protein_coding MGP_CBAJ_T0051592.1 MGP_CBAJ_G0024905.1 mouse_genomes_project 19 48892979 48895434 - MGP_CBAJ_P0051592 Kcnip2 protein_coding protein_coding MGP_CBAJ_T0051593.1 MGP_CBAJ_G0024905.1 mouse_genomes_project 19 48893480 48920782 - Kcnip2 protein_coding retained_intron MGP_CBAJ_T0051594.1 MGP_CBAJ_G0024905.1 mouse_genomes_project 19 48893480 48920821 - MGP_CBAJ_P0051594 Kcnip2 protein_coding protein_coding MGP_CBAJ_T0051595.1 MGP_CBAJ_G0024905.1 mouse_genomes_project 19 48893480 48920782 - MGP_CBAJ_P0051595 Kcnip2 protein_coding protein_coding MGP_CBAJ_T0051596.1 MGP_CBAJ_G0024905.1 mouse_genomes_project 19 48894483 48915169 - MGP_CBAJ_P0051596 Kcnip2 protein_coding protein_coding MGP_CBAJ_T0051597.1 MGP_CBAJ_G0024905.1 mouse_genomes_project 19 48894582 48920785 - MGP_CBAJ_P0051597 Kcnip2 protein_coding protein_coding MGP_CBAJ_T0051598.1 MGP_CBAJ_G0024905.1 mouse_genomes_project 19 48894804 48896794 - MGP_CBAJ_P0051598 Kcnip2 protein_coding protein_coding MGP_CBAJ_T0051599.1 MGP_CBAJ_G0024905.1 mouse_genomes_project 19 48894804 48920593 - MGP_CBAJ_P0051599 Kcnip2 protein_coding protein_coding MGP_CBAJ_T0051600.1 MGP_CBAJ_G0024905.1 mouse_genomes_project 19 48895125 48920563 - MGP_CBAJ_P0051600 Kcnip2 protein_coding protein_coding MGP_CBAJ_T0051601.1 MGP_CBAJ_G0024905.1 mouse_genomes_project 19 48896069 48898134 - MGP_CBAJ_P0051601 Kcnip2 protein_coding protein_coding MGP_CBAJ_T0006969.1 MGP_CBAJ_G0005720.1 mouse_genomes_project 19 19788092 19805611 + 1500015L24Rik lincRNA lincRNA MGP_CBAJ_T0006970.1 MGP_CBAJ_G0005720.1 mouse_genomes_project 19 19805189 19805603 + 1500015L24Rik lincRNA lincRNA MGP_CBAJ_T0050639.1 MGP_CBAJ_G0024525.1 mouse_genomes_project 19 6410287 6411205 - MGP_CBAJ_P0050639 Uqcc3 protein_coding protein_coding MGP_CBAJ_T0049891.1 MGP_CBAJ_G0024326.1 mouse_genomes_project 19 38638 48603 + MGP_CBAJ_P0049891 Mrpl21 protein_coding protein_coding MGP_CBAJ_T0049892.1 MGP_CBAJ_G0024326.1 mouse_genomes_project 19 38792 44945 + Mrpl21 protein_coding retained_intron MGP_CBAJ_T0049893.1 MGP_CBAJ_G0024326.1 mouse_genomes_project 19 38797 41091 + Mrpl21 protein_coding retained_intron MGP_CBAJ_T0049894.1 MGP_CBAJ_G0024326.1 mouse_genomes_project 19 38797 46967 + MGP_CBAJ_P0049894 Mrpl21 protein_coding protein_coding MGP_CBAJ_T0049895.1 MGP_CBAJ_G0024326.1 mouse_genomes_project 19 38801 43505 + MGP_CBAJ_P0049895 Mrpl21 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049896.1 MGP_CBAJ_G0024326.1 mouse_genomes_project 19 42576 46961 + Mrpl21 protein_coding retained_intron MGP_CBAJ_T0051274.1 MGP_CBAJ_G0024792.1 mouse_genomes_project 19 39342479 39491330 + MGP_CBAJ_P0051274 Exoc6 protein_coding protein_coding MGP_CBAJ_T0050076.1 MGP_CBAJ_G0024368.1 mouse_genomes_project 19 1407564 1429052 - MGP_CBAJ_P0050076 Rhod protein_coding protein_coding MGP_CBAJ_T0050077.1 MGP_CBAJ_G0024368.1 mouse_genomes_project 19 1407772 1429041 - MGP_CBAJ_P0050077 Rhod protein_coding protein_coding MGP_CBAJ_T0050078.1 MGP_CBAJ_G0024368.1 mouse_genomes_project 19 1408332 1408661 - Rhod protein_coding processed_transcript MGP_CBAJ_T0050914.1 MGP_CBAJ_G0024660.1 mouse_genomes_project 19 12174019 12175106 + MGP_CBAJ_P0050914 Olfr1495 protein_coding protein_coding MGP_CBAJ_T0003800.1 MGP_CBAJ_G0003399.1 mouse_genomes_project 19 50914566 50918142 + Gm19557 antisense antisense MGP_CBAJ_T0050624.1 MGP_CBAJ_G0024520.1 mouse_genomes_project 19 6341265 6355997 + MGP_CBAJ_P0050624 Hnrnpul2 protein_coding protein_coding MGP_CBAJ_T0051398.1 MGP_CBAJ_G0024840.1 mouse_genomes_project 19 44291192 44330208 - MGP_CBAJ_P0051398 Rrp12 protein_coding protein_coding MGP_CBAJ_T0050477.1 MGP_CBAJ_G0024480.1 mouse_genomes_project 19 4175984 4186853 + MGP_CBAJ_P0050477 Bad protein_coding protein_coding MGP_CBAJ_T0050478.1 MGP_CBAJ_G0024480.1 mouse_genomes_project 19 4176446 4186847 + MGP_CBAJ_P0050478 Bad protein_coding protein_coding MGP_CBAJ_T0050479.1 MGP_CBAJ_G0024480.1 mouse_genomes_project 19 4176624 4186848 + MGP_CBAJ_P0050479 Bad protein_coding protein_coding MGP_CBAJ_T0050480.1 MGP_CBAJ_G0024480.1 mouse_genomes_project 19 4177002 4186207 + MGP_CBAJ_P0050480 Bad protein_coding protein_coding MGP_CBAJ_T0050481.1 MGP_CBAJ_G0024480.1 mouse_genomes_project 19 4185721 4186829 + MGP_CBAJ_P0050481 Bad protein_coding protein_coding MGP_CBAJ_T0013213.1 MGP_CBAJ_G0011325.1 mouse_genomes_project 19 33472135 33506107 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006989.1 MGP_CBAJ_G0005733.1 mouse_genomes_project 19 39912513 39915495 - I830134H01Rik lincRNA lincRNA MGP_CBAJ_T0006990.1 MGP_CBAJ_G0005733.1 mouse_genomes_project 19 39912623 39915495 - I830134H01Rik lincRNA lincRNA MGP_CBAJ_T0051898.1 MGP_CBAJ_G0024998.1 mouse_genomes_project 19 64210892 64248902 + MGP_CBAJ_P0051898 Slc18a2 protein_coding protein_coding MGP_CBAJ_T0050637.1 MGP_CBAJ_G0024524.1 mouse_genomes_project 19 6399387 6403310 + MGP_CBAJ_P0050637 Ubxn1 protein_coding protein_coding MGP_CBAJ_T0050638.1 MGP_CBAJ_G0024524.1 mouse_genomes_project 19 6399471 6403318 + MGP_CBAJ_P0050638 Ubxn1 protein_coding protein_coding MGP_CBAJ_T0050739.1 MGP_CBAJ_G0024568.1 mouse_genomes_project 19 8651518 8665972 - MGP_CBAJ_P0050739 Tmem109 protein_coding protein_coding MGP_CBAJ_T0050740.1 MGP_CBAJ_G0024568.1 mouse_genomes_project 19 8652712 8661273 - MGP_CBAJ_P0050740 Tmem109 protein_coding protein_coding MGP_CBAJ_T0050741.1 MGP_CBAJ_G0024568.1 mouse_genomes_project 19 8652996 8655600 - Tmem109 protein_coding retained_intron MGP_CBAJ_T0050742.1 MGP_CBAJ_G0024568.1 mouse_genomes_project 19 8653051 8665972 - MGP_CBAJ_P0050742 Tmem109 protein_coding protein_coding MGP_CBAJ_T0050743.1 MGP_CBAJ_G0024568.1 mouse_genomes_project 19 8654790 8665682 - Tmem109 protein_coding retained_intron MGP_CBAJ_T0050744.1 MGP_CBAJ_G0024568.1 mouse_genomes_project 19 8655104 8665702 - MGP_CBAJ_P0050744 Tmem109 protein_coding protein_coding MGP_CBAJ_T0050745.1 MGP_CBAJ_G0024568.1 mouse_genomes_project 19 8655122 8665669 - MGP_CBAJ_P0050745 Tmem109 protein_coding protein_coding MGP_CBAJ_T0050746.1 MGP_CBAJ_G0024568.1 mouse_genomes_project 19 8661404 8665669 - Tmem109 protein_coding processed_transcript MGP_CBAJ_T0003782.1 MGP_CBAJ_G0003386.1 mouse_genomes_project 19 4682728 4684510 + 1700105P06Rik antisense antisense MGP_CBAJ_T0050916.1 MGP_CBAJ_G0024662.1 mouse_genomes_project 19 12196508 12197453 - MGP_CBAJ_P0050916 Olfr1497 protein_coding protein_coding MGP_CBAJ_T0051756.1 MGP_CBAJ_G0024957.1 mouse_genomes_project 19 57518977 57529697 - MGP_CBAJ_P0051756 Smndc1 protein_coding protein_coding MGP_CBAJ_T0051216.1 MGP_CBAJ_G0024775.1 mouse_genomes_project 19 36014217 36098415 - MGP_CBAJ_P0051216 Slc16a12 protein_coding protein_coding MGP_CBAJ_T0050283.1 MGP_CBAJ_G0024447.1 mouse_genomes_project 19 3299146 3300427 + MGP_CBAJ_P0050283 Znhit2 protein_coding protein_coding MGP_CBAJ_T0051423.1 MGP_CBAJ_G0024846.1 mouse_genomes_project 19 44497936 44509667 + MGP_CBAJ_P0051423 Ankrd2 protein_coding protein_coding MGP_CBAJ_T0050298.1 MGP_CBAJ_G0024449.1 mouse_genomes_project 19 3308629 3321122 - MGP_CBAJ_P0050298 Vps51 protein_coding protein_coding MGP_CBAJ_T0050299.1 MGP_CBAJ_G0024449.1 mouse_genomes_project 19 3308777 3310107 - Vps51 protein_coding retained_intron MGP_CBAJ_T0050300.1 MGP_CBAJ_G0024449.1 mouse_genomes_project 19 3308781 3318013 - MGP_CBAJ_P0050300 Vps51 protein_coding protein_coding MGP_CBAJ_T0050301.1 MGP_CBAJ_G0024449.1 mouse_genomes_project 19 3308838 3309938 - Vps51 protein_coding retained_intron MGP_CBAJ_T0050302.1 MGP_CBAJ_G0024449.1 mouse_genomes_project 19 3309004 3309859 - MGP_CBAJ_P0050302 Vps51 protein_coding protein_coding MGP_CBAJ_T0050303.1 MGP_CBAJ_G0024449.1 mouse_genomes_project 19 3309536 3310401 - Vps51 protein_coding retained_intron MGP_CBAJ_T0050304.1 MGP_CBAJ_G0024449.1 mouse_genomes_project 19 3309655 3310486 - Vps51 protein_coding retained_intron MGP_CBAJ_T0050305.1 MGP_CBAJ_G0024449.1 mouse_genomes_project 19 3310868 3318019 - Vps51 protein_coding retained_intron MGP_CBAJ_T0050306.1 MGP_CBAJ_G0024449.1 mouse_genomes_project 19 3312204 3317684 - Vps51 protein_coding retained_intron MGP_CBAJ_T0050307.1 MGP_CBAJ_G0024449.1 mouse_genomes_project 19 3312269 3318014 - MGP_CBAJ_P0050307 Vps51 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050308.1 MGP_CBAJ_G0024449.1 mouse_genomes_project 19 3316718 3318016 - MGP_CBAJ_P0050308 Vps51 protein_coding protein_coding MGP_CBAJ_T0051435.1 MGP_CBAJ_G0024853.1 mouse_genomes_project 19 44633172 44646955 + Zfyve27 protein_coding retained_intron MGP_CBAJ_T0051436.1 MGP_CBAJ_G0024853.1 mouse_genomes_project 19 44639791 44663814 + MGP_CBAJ_P0051436 Zfyve27 protein_coding protein_coding MGP_CBAJ_T0051437.1 MGP_CBAJ_G0024853.1 mouse_genomes_project 19 44639818 44660946 + MGP_CBAJ_P0051437 Zfyve27 protein_coding protein_coding MGP_CBAJ_T0051438.1 MGP_CBAJ_G0024853.1 mouse_genomes_project 19 44639924 44642431 + Zfyve27 protein_coding retained_intron MGP_CBAJ_T0051439.1 MGP_CBAJ_G0024853.1 mouse_genomes_project 19 44648049 44653386 + MGP_CBAJ_P0051439 Zfyve27 protein_coding protein_coding MGP_CBAJ_T0051440.1 MGP_CBAJ_G0024853.1 mouse_genomes_project 19 44652711 44654055 + Zfyve27 protein_coding retained_intron MGP_CBAJ_T0051441.1 MGP_CBAJ_G0024853.1 mouse_genomes_project 19 44654561 44659743 + Zfyve27 protein_coding retained_intron MGP_CBAJ_T0051442.1 MGP_CBAJ_G0024853.1 mouse_genomes_project 19 44654835 44660123 + Zfyve27 protein_coding retained_intron MGP_CBAJ_T0051094.1 MGP_CBAJ_G0024728.1 mouse_genomes_project 19 29807915 29877360 + MGP_CBAJ_P0051094 Jak2 protein_coding protein_coding MGP_CBAJ_T0051095.1 MGP_CBAJ_G0024728.1 mouse_genomes_project 19 29807915 29877360 + MGP_CBAJ_P0051095 Jak2 protein_coding protein_coding MGP_CBAJ_T0051386.1 MGP_CBAJ_G0024835.1 mouse_genomes_project 19 43972650 43976817 + MGP_CBAJ_P0051386 Gm340 protein_coding protein_coding MGP_CBAJ_T0013194.1 MGP_CBAJ_G0011306.1 mouse_genomes_project 19 5029109 5030277 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0051360.1 MGP_CBAJ_G0024825.1 mouse_genomes_project 19 42903549 42905326 + Entpd1 protein_coding processed_transcript MGP_CBAJ_T0051361.1 MGP_CBAJ_G0024825.1 mouse_genomes_project 19 42903572 42906899 + Entpd1 protein_coding processed_transcript MGP_CBAJ_T0051362.1 MGP_CBAJ_G0024825.1 mouse_genomes_project 19 42903580 43055778 + MGP_CBAJ_P0051362 Entpd1 protein_coding protein_coding MGP_CBAJ_T0051363.1 MGP_CBAJ_G0024825.1 mouse_genomes_project 19 42955051 43057586 + MGP_CBAJ_P0051363 Entpd1 protein_coding protein_coding MGP_CBAJ_T0051364.1 MGP_CBAJ_G0024825.1 mouse_genomes_project 19 42955080 43038747 + MGP_CBAJ_P0051364 Entpd1 protein_coding protein_coding MGP_CBAJ_T0051365.1 MGP_CBAJ_G0024825.1 mouse_genomes_project 19 42955125 43055067 + MGP_CBAJ_P0051365 Entpd1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051366.1 MGP_CBAJ_G0024825.1 mouse_genomes_project 19 42955480 43015020 + Entpd1 protein_coding processed_transcript MGP_CBAJ_T0051367.1 MGP_CBAJ_G0024825.1 mouse_genomes_project 19 42955774 43036818 + Entpd1 protein_coding processed_transcript MGP_CBAJ_T0051368.1 MGP_CBAJ_G0024825.1 mouse_genomes_project 19 42979356 43036914 + Entpd1 protein_coding processed_transcript MGP_CBAJ_T0051369.1 MGP_CBAJ_G0024825.1 mouse_genomes_project 19 43039770 43055739 + MGP_CBAJ_P0051369 Entpd1 protein_coding protein_coding MGP_CBAJ_T0051370.1 MGP_CBAJ_G0024825.1 mouse_genomes_project 19 43052167 43052849 + Entpd1 protein_coding processed_transcript MGP_CBAJ_T0050702.1 MGP_CBAJ_G0024550.1 mouse_genomes_project 19 7964866 8026723 - MGP_CBAJ_P0050702 Dagla protein_coding protein_coding MGP_CBAJ_T0050703.1 MGP_CBAJ_G0024550.1 mouse_genomes_project 19 7964869 8026703 - MGP_CBAJ_P0050703 Dagla protein_coding nonsense_mediated_decay MGP_CBAJ_T0050704.1 MGP_CBAJ_G0024550.1 mouse_genomes_project 19 7972931 7976446 - Dagla protein_coding processed_transcript MGP_CBAJ_T0006999.1 MGP_CBAJ_G0005741.1 mouse_genomes_project 19 48356011 48364881 - Gm28578 lincRNA lincRNA MGP_CBAJ_T0007000.1 MGP_CBAJ_G0005741.1 mouse_genomes_project 19 48356031 48356777 - Gm28578 lincRNA lincRNA MGP_CBAJ_T0007001.1 MGP_CBAJ_G0005741.1 mouse_genomes_project 19 48362028 48364867 - Gm28578 lincRNA lincRNA MGP_CBAJ_T0051890.1 MGP_CBAJ_G0024994.1 mouse_genomes_project 19 63851419 63883028 + MGP_CBAJ_P0051890 Eno4 protein_coding protein_coding MGP_CBAJ_T0051891.1 MGP_CBAJ_G0024994.1 mouse_genomes_project 19 63851419 63883026 + MGP_CBAJ_P0051891 Eno4 protein_coding protein_coding MGP_CBAJ_T0051892.1 MGP_CBAJ_G0024994.1 mouse_genomes_project 19 63863823 63883024 + MGP_CBAJ_P0051892 Eno4 protein_coding protein_coding MGP_CBAJ_T0051893.1 MGP_CBAJ_G0024994.1 mouse_genomes_project 19 63866152 63882540 + MGP_CBAJ_P0051893 Eno4 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051428.1 MGP_CBAJ_G0024848.1 mouse_genomes_project 19 44516802 44518182 + MGP_CBAJ_P0051428 4933411K16Rik protein_coding protein_coding MGP_CBAJ_T0051444.1 MGP_CBAJ_G0024855.1 mouse_genomes_project 19 44717215 44754161 + MGP_CBAJ_P0051444 Golga7b protein_coding protein_coding MGP_CBAJ_T0051445.1 MGP_CBAJ_G0024855.1 mouse_genomes_project 19 44729345 44754161 + MGP_CBAJ_P0051445 Golga7b protein_coding protein_coding MGP_CBAJ_T0051758.1 MGP_CBAJ_G0024959.1 mouse_genomes_project 19 57782396 57833646 + MGP_CBAJ_P0051758 Smc3 protein_coding protein_coding MGP_CBAJ_T0051759.1 MGP_CBAJ_G0024959.1 mouse_genomes_project 19 57818141 57819170 + Smc3 protein_coding retained_intron MGP_CBAJ_T0051760.1 MGP_CBAJ_G0024959.1 mouse_genomes_project 19 57827524 57828975 + Smc3 protein_coding retained_intron MGP_CBAJ_T0051573.1 MGP_CBAJ_G0024901.1 mouse_genomes_project 19 48631713 48723668 - MGP_CBAJ_P0051573 Fbxw4 protein_coding protein_coding MGP_CBAJ_T0051575.1 MGP_CBAJ_G0024901.1 mouse_genomes_project 19 48632078 48649029 - MGP_CBAJ_P0051575 Fbxw4 protein_coding protein_coding MGP_CBAJ_T0051576.1 MGP_CBAJ_G0024901.1 mouse_genomes_project 19 48632259 48647404 - MGP_CBAJ_P0051576 Fbxw4 protein_coding protein_coding MGP_CBAJ_T0051577.1 MGP_CBAJ_G0024901.1 mouse_genomes_project 19 48632261 48633355 - Fbxw4 protein_coding retained_intron MGP_CBAJ_T0051578.1 MGP_CBAJ_G0024901.1 mouse_genomes_project 19 48632305 48647404 - MGP_CBAJ_P0051578 Fbxw4 protein_coding protein_coding MGP_CBAJ_T0051579.1 MGP_CBAJ_G0024901.1 mouse_genomes_project 19 48632376 48648223 - MGP_CBAJ_P0051579 Fbxw4 protein_coding protein_coding MGP_CBAJ_T0051580.1 MGP_CBAJ_G0024901.1 mouse_genomes_project 19 48633226 48686623 - Fbxw4 protein_coding retained_intron MGP_CBAJ_T0051581.1 MGP_CBAJ_G0024901.1 mouse_genomes_project 19 48647022 48686623 - Fbxw4 protein_coding retained_intron MGP_CBAJ_T0051582.1 MGP_CBAJ_G0024901.1 mouse_genomes_project 19 48686358 48696844 - MGP_CBAJ_P0051582 Fbxw4 protein_coding protein_coding MGP_CBAJ_T0099067.1 MGP_CBAJ_G0037322.1 mouse_genomes_project 19 23073855 23073962 + Gm24263 snRNA snRNA MGP_CBAJ_T0099083.1 MGP_CBAJ_G0037338.1 mouse_genomes_project 19 66342312 66342428 - Gm22365 snRNA snRNA MGP_CBAJ_T0051560.1 MGP_CBAJ_G0024894.1 mouse_genomes_project 19 48000005 48012021 + MGP_CBAJ_P0051560 Sfxn3 protein_coding protein_coding MGP_CBAJ_T0051561.1 MGP_CBAJ_G0024894.1 mouse_genomes_project 19 48000005 48012021 + MGP_CBAJ_P0051561 Sfxn3 protein_coding protein_coding MGP_CBAJ_T0051562.1 MGP_CBAJ_G0024894.1 mouse_genomes_project 19 48000005 48012021 + MGP_CBAJ_P0051562 Sfxn3 protein_coding protein_coding MGP_CBAJ_T0100325.1 MGP_CBAJ_G0038580.1 mouse_genomes_project 19 25179424 25179556 - Gm24252 snoRNA snoRNA MGP_CBAJ_T0050268.1 MGP_CBAJ_G0024441.1 mouse_genomes_project 19 3190424 3215518 - MGP_CBAJ_P0050268 Slc22a20 protein_coding protein_coding MGP_CBAJ_T0050973.1 MGP_CBAJ_G0024685.1 mouse_genomes_project 19 20011824 20058539 + MGP_CBAJ_P0050973 Aldh1a1 protein_coding protein_coding MGP_CBAJ_T0050278.1 MGP_CBAJ_G0024444.1 mouse_genomes_project 19 3290291 3294450 - MGP_CBAJ_P0050278 Mrpl49 protein_coding protein_coding MGP_CBAJ_T0050870.1 MGP_CBAJ_G0024624.1 mouse_genomes_project 19 10803629 10809305 + MGP_CBAJ_P0050870 Olfr1443 protein_coding protein_coding MGP_CBAJ_T0013210.1 MGP_CBAJ_G0011322.1 mouse_genomes_project 19 29257551 29257821 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006967.1 MGP_CBAJ_G0005718.1 mouse_genomes_project 19 9195314 9196927 + Gm28935 lincRNA lincRNA MGP_CBAJ_T0050505.1 MGP_CBAJ_G0024495.1 mouse_genomes_project 19 4555360 4558180 + MGP_CBAJ_P0050505 Rcor2 protein_coding protein_coding MGP_CBAJ_T0050506.1 MGP_CBAJ_G0024495.1 mouse_genomes_project 19 4556996 4564034 + MGP_CBAJ_P0050506 Rcor2 protein_coding protein_coding MGP_CBAJ_T0050507.1 MGP_CBAJ_G0024495.1 mouse_genomes_project 19 4559772 4560572 + Rcor2 protein_coding retained_intron MGP_CBAJ_T0050851.1 MGP_CBAJ_G0024612.1 mouse_genomes_project 19 10348220 10352355 + MGP_CBAJ_P0050851 Olfr1434 protein_coding protein_coding MGP_CBAJ_T0100313.1 MGP_CBAJ_G0038568.1 mouse_genomes_project 19 6226656 6226725 + Gm22680 snoRNA snoRNA MGP_CBAJ_T0050644.1 MGP_CBAJ_G0024528.1 mouse_genomes_project 19 6419162 6432047 + MGP_CBAJ_P0050644 Ints5 protein_coding protein_coding MGP_CBAJ_T0050650.1 MGP_CBAJ_G0024528.1 mouse_genomes_project 19 6422815 6432295 + Ints5 protein_coding processed_transcript MGP_CBAJ_T0050651.1 MGP_CBAJ_G0024528.1 mouse_genomes_project 19 6425273 6436612 + MGP_CBAJ_P0050651 Ints5 protein_coding protein_coding MGP_CBAJ_T0097800.1 MGP_CBAJ_G0036073.1 mouse_genomes_project 19 65288115 65289457 + pseudogene pseudogene MGP_CBAJ_T0099076.1 MGP_CBAJ_G0037331.1 mouse_genomes_project 19 46553648 46553755 - Gm24400 snRNA snRNA MGP_CBAJ_T0050472.1 MGP_CBAJ_G0024479.1 mouse_genomes_project 19 4172201 4175640 - MGP_CBAJ_P0050472 Gpr137 protein_coding protein_coding MGP_CBAJ_T0050473.1 MGP_CBAJ_G0024479.1 mouse_genomes_project 19 4172202 4175326 - MGP_CBAJ_P0050473 Gpr137 protein_coding protein_coding MGP_CBAJ_T0050474.1 MGP_CBAJ_G0024479.1 mouse_genomes_project 19 4172202 4175612 - MGP_CBAJ_P0050474 Gpr137 protein_coding protein_coding MGP_CBAJ_T0050475.1 MGP_CBAJ_G0024479.1 mouse_genomes_project 19 4172202 4176574 - MGP_CBAJ_P0050475 Gpr137 protein_coding protein_coding MGP_CBAJ_T0050476.1 MGP_CBAJ_G0024479.1 mouse_genomes_project 19 4172202 4175326 - MGP_CBAJ_P0050476 Gpr137 protein_coding protein_coding MGP_CBAJ_T0013196.1 MGP_CBAJ_G0011308.1 mouse_genomes_project 19 9254839 9255896 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0050094.1 MGP_CBAJ_G0024376.1 mouse_genomes_project 19 1759534 1836897 - MGP_CBAJ_P0050094 Gm21992 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050102.1 MGP_CBAJ_G0024376.1 mouse_genomes_project 19 1805973 1836793 - MGP_CBAJ_P0050102 Gm21992 protein_coding protein_coding MGP_CBAJ_T0050103.1 MGP_CBAJ_G0024376.1 mouse_genomes_project 19 1805974 1836497 - MGP_CBAJ_P0050103 Gm21992 protein_coding protein_coding MGP_CBAJ_T0050105.1 MGP_CBAJ_G0024376.1 mouse_genomes_project 19 1811974 1836888 - Gm21992 protein_coding retained_intron MGP_CBAJ_T0051093.1 MGP_CBAJ_G0024727.1 mouse_genomes_project 19 29638000 29685253 + MGP_CBAJ_P0051093 Rcl1 protein_coding protein_coding MGP_CBAJ_T0003792.1 MGP_CBAJ_G0003393.1 mouse_genomes_project 19 40732295 40736166 - Gm28991 antisense antisense MGP_CBAJ_T0050676.1 MGP_CBAJ_G0024542.1 mouse_genomes_project 19 7686674 7704332 - MGP_CBAJ_P0050676 Best1 protein_coding protein_coding MGP_CBAJ_T0050677.1 MGP_CBAJ_G0024542.1 mouse_genomes_project 19 7692048 7694416 - Best1 protein_coding processed_transcript MGP_CBAJ_T0050482.1 MGP_CBAJ_G0024481.1 mouse_genomes_project 19 4188668 4206837 - MGP_CBAJ_P0050482 Plcb3 protein_coding protein_coding MGP_CBAJ_T0010165.1 MGP_CBAJ_G0008303.1 mouse_genomes_project 19 3878774 3878900 + Gm26460 miRNA miRNA MGP_CBAJ_T0051627.1 MGP_CBAJ_G0024912.1 mouse_genomes_project 19 49310245 49322880 - MGP_CBAJ_P0051627 Pitx3 protein_coding protein_coding MGP_CBAJ_T0051628.1 MGP_CBAJ_G0024912.1 mouse_genomes_project 19 49311055 49311850 - Pitx3 protein_coding retained_intron MGP_CBAJ_T0051629.1 MGP_CBAJ_G0024912.1 mouse_genomes_project 19 49311592 49315556 - MGP_CBAJ_P0051629 Pitx3 protein_coding protein_coding MGP_CBAJ_T0097797.1 MGP_CBAJ_G0036070.1 mouse_genomes_project 19 12325719 12329510 + pseudogene pseudogene MGP_CBAJ_T0007015.1 MGP_CBAJ_G0005752.1 mouse_genomes_project 19 64925435 64930277 - Gm17203 lincRNA lincRNA MGP_CBAJ_T0051903.1 MGP_CBAJ_G0025001.1 mouse_genomes_project 19 64934789 64977341 - MGP_CBAJ_P0051903 Rab11fip2 protein_coding protein_coding MGP_CBAJ_T0051904.1 MGP_CBAJ_G0025001.1 mouse_genomes_project 19 64935600 64977052 - MGP_CBAJ_P0051904 Rab11fip2 protein_coding protein_coding MGP_CBAJ_T0051905.1 MGP_CBAJ_G0025001.1 mouse_genomes_project 19 64938820 64976688 - MGP_CBAJ_P0051905 Rab11fip2 protein_coding protein_coding MGP_CBAJ_T0100315.1 MGP_CBAJ_G0038570.1 mouse_genomes_project 19 6227181 6227307 + Snord22 snoRNA snoRNA MGP_CBAJ_T0051755.1 MGP_CBAJ_G0024956.1 mouse_genomes_project 19 57509088 57509289 - MGP_CBAJ_P0051755 Gm10197 protein_coding protein_coding MGP_CBAJ_T0100306.1 MGP_CBAJ_G0038561.1 mouse_genomes_project 19 1003484 1003700 - Gm23927 snoRNA snoRNA MGP_CBAJ_T0050686.1 MGP_CBAJ_G0024545.1 mouse_genomes_project 19 7769381 7806611 - MGP_CBAJ_P0050686 Fads2 protein_coding protein_coding MGP_CBAJ_T0051027.1 MGP_CBAJ_G0024712.1 mouse_genomes_project 19 25598114 25716099 + MGP_CBAJ_P0051027 Dmrt1 protein_coding protein_coding MGP_CBAJ_T0051028.1 MGP_CBAJ_G0024712.1 mouse_genomes_project 19 25598202 25715260 + MGP_CBAJ_P0051028 Dmrt1 protein_coding protein_coding MGP_CBAJ_T0051029.1 MGP_CBAJ_G0024712.1 mouse_genomes_project 19 25598203 25662565 + Dmrt1 protein_coding processed_transcript MGP_CBAJ_T0101766.1 MGP_CBAJ_G0039797.1 mouse_genomes_project 19 6905937 6923792 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0051189.1 MGP_CBAJ_G0024760.1 mouse_genomes_project 19 35259294 35298872 + MGP_CBAJ_P0051189 Lipk protein_coding protein_coding MGP_CBAJ_T0050172.1 MGP_CBAJ_G0024411.1 mouse_genomes_project 19 2551714 2553865 + AI837181 protein_coding processed_transcript MGP_CBAJ_T0050173.1 MGP_CBAJ_G0024411.1 mouse_genomes_project 19 2551714 2553865 + MGP_CBAJ_P0050173 AI837181 protein_coding protein_coding MGP_CBAJ_T0003779.1 MGP_CBAJ_G0003384.1 mouse_genomes_project 19 3855561 3856703 - Gm14967 antisense antisense MGP_CBAJ_T0051443.1 MGP_CBAJ_G0024854.1 mouse_genomes_project 19 44667194 44671483 - MGP_CBAJ_P0051443 Sfrp5 protein_coding protein_coding MGP_CBAJ_T0010170.1 MGP_CBAJ_G0008308.1 mouse_genomes_project 19 6249786 6249895 + Mir6992 miRNA miRNA MGP_CBAJ_T0013223.1 MGP_CBAJ_G0011335.1 mouse_genomes_project 19 66333771 66334108 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0050122.1 MGP_CBAJ_G0024387.1 mouse_genomes_project 19 1975053 1992319 - MGP_CBAJ_P0050122 protein_coding protein_coding MGP_CBAJ_T0050123.1 MGP_CBAJ_G0024387.1 mouse_genomes_project 19 1976257 1992354 - MGP_CBAJ_P0050123 protein_coding protein_coding MGP_CBAJ_T0050124.1 MGP_CBAJ_G0024387.1 mouse_genomes_project 19 1982237 1985880 - protein_coding retained_intron MGP_CBAJ_T0050125.1 MGP_CBAJ_G0024387.1 mouse_genomes_project 19 1982263 1992325 - protein_coding processed_transcript MGP_CBAJ_T0050126.1 MGP_CBAJ_G0024387.1 mouse_genomes_project 19 1982267 1992300 - MGP_CBAJ_P0050126 protein_coding protein_coding MGP_CBAJ_T0050127.1 MGP_CBAJ_G0024387.1 mouse_genomes_project 19 1982274 1992294 - protein_coding processed_transcript MGP_CBAJ_T0050128.1 MGP_CBAJ_G0024387.1 mouse_genomes_project 19 1990826 1992273 - protein_coding retained_intron MGP_CBAJ_T0050678.1 MGP_CBAJ_G0024543.1 mouse_genomes_project 19 7718488 7732811 + MGP_CBAJ_P0050678 Rab3il1 protein_coding protein_coding MGP_CBAJ_T0050679.1 MGP_CBAJ_G0024543.1 mouse_genomes_project 19 7721664 7740691 + MGP_CBAJ_P0050679 Rab3il1 protein_coding protein_coding MGP_CBAJ_T0050680.1 MGP_CBAJ_G0024543.1 mouse_genomes_project 19 7721665 7740690 + MGP_CBAJ_P0050680 Rab3il1 protein_coding protein_coding MGP_CBAJ_T0050681.1 MGP_CBAJ_G0024543.1 mouse_genomes_project 19 7721665 7743615 + MGP_CBAJ_P0050681 Rab3il1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050682.1 MGP_CBAJ_G0024543.1 mouse_genomes_project 19 7721736 7733543 + MGP_CBAJ_P0050682 Rab3il1 protein_coding protein_coding MGP_CBAJ_T0050683.1 MGP_CBAJ_G0024543.1 mouse_genomes_project 19 7721820 7740696 + MGP_CBAJ_P0050683 Rab3il1 protein_coding protein_coding MGP_CBAJ_T0050684.1 MGP_CBAJ_G0024543.1 mouse_genomes_project 19 7736904 7739045 + Rab3il1 protein_coding retained_intron MGP_CBAJ_T0098004.1 MGP_CBAJ_G0036277.1 mouse_genomes_project 19 3403078 3403198 + n-R5s19 rRNA rRNA MGP_CBAJ_T0051687.1 MGP_CBAJ_G0024933.1 mouse_genomes_project 19 50417002 50424073 - MGP_CBAJ_P0051687 Usmg5 protein_coding protein_coding MGP_CBAJ_T0006984.1 MGP_CBAJ_G0005729.1 mouse_genomes_project 19 35775830 35777641 + Gm26902 lincRNA lincRNA MGP_CBAJ_T0006985.1 MGP_CBAJ_G0005729.1 mouse_genomes_project 19 35775855 35782515 + Gm26902 lincRNA lincRNA MGP_CBAJ_T0051708.1 MGP_CBAJ_G0024942.1 mouse_genomes_project 19 51001629 51059668 + MGP_CBAJ_P0051708 Slk protein_coding protein_coding MGP_CBAJ_T0051709.1 MGP_CBAJ_G0024942.1 mouse_genomes_project 19 51001970 51055387 + MGP_CBAJ_P0051709 Slk protein_coding protein_coding MGP_CBAJ_T0051710.1 MGP_CBAJ_G0024942.1 mouse_genomes_project 19 51034316 51038978 + Slk protein_coding retained_intron MGP_CBAJ_T0051711.1 MGP_CBAJ_G0024942.1 mouse_genomes_project 19 51036307 51039478 + Slk protein_coding retained_intron MGP_CBAJ_T0051712.1 MGP_CBAJ_G0024942.1 mouse_genomes_project 19 51048061 51049386 + Slk protein_coding retained_intron MGP_CBAJ_T0051264.1 MGP_CBAJ_G0024788.1 mouse_genomes_project 19 38935261 38953000 + MGP_CBAJ_P0051264 March5 protein_coding protein_coding MGP_CBAJ_T0051265.1 MGP_CBAJ_G0024788.1 mouse_genomes_project 19 38935269 38949565 + March5 protein_coding retained_intron MGP_CBAJ_T0051266.1 MGP_CBAJ_G0024788.1 mouse_genomes_project 19 38935563 38957001 + MGP_CBAJ_P0051266 March5 protein_coding protein_coding MGP_CBAJ_T0003806.1 MGP_CBAJ_G0003405.1 mouse_genomes_project 19 64392632 64429799 - Emx2os antisense antisense MGP_CBAJ_T0050281.1 MGP_CBAJ_G0024446.1 mouse_genomes_project 19 3294648 3296425 + MGP_CBAJ_P0050281 protein_coding protein_coding MGP_CBAJ_T0051732.1 MGP_CBAJ_G0024949.1 mouse_genomes_project 19 51700403 52390698 + MGP_CBAJ_P0051732 Sorcs3 protein_coding protein_coding MGP_CBAJ_T0101769.1 MGP_CBAJ_G0039800.1 mouse_genomes_project 19 35071298 35077529 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0099082.1 MGP_CBAJ_G0037337.1 mouse_genomes_project 19 66342251 66355696 - Gm23102 snRNA snRNA MGP_CBAJ_T0051693.1 MGP_CBAJ_G0024938.1 mouse_genomes_project 19 50517503 50518169 - MGP_CBAJ_P0051693 Gm6970 protein_coding protein_coding MGP_CBAJ_T0050247.1 MGP_CBAJ_G0024435.1 mouse_genomes_project 19 3052170 3083594 - MGP_CBAJ_P0050247 Frmd8 protein_coding protein_coding MGP_CBAJ_T0050248.1 MGP_CBAJ_G0024435.1 mouse_genomes_project 19 3070579 3072006 - Frmd8 protein_coding retained_intron MGP_CBAJ_T0050249.1 MGP_CBAJ_G0024435.1 mouse_genomes_project 19 3073507 3081750 - Frmd8 protein_coding retained_intron MGP_CBAJ_T0050250.1 MGP_CBAJ_G0024435.1 mouse_genomes_project 19 3073593 3083559 - MGP_CBAJ_P0050250 Frmd8 protein_coding protein_coding MGP_CBAJ_T0051870.1 MGP_CBAJ_G0024984.1 mouse_genomes_project 19 62076526 62111046 + MGP_CBAJ_P0051870 Fam160b1 protein_coding protein_coding MGP_CBAJ_T0003797.1 MGP_CBAJ_G0003396.1 mouse_genomes_project 19 47736715 47744138 - 1700039E22Rik antisense antisense MGP_CBAJ_T0050723.1 MGP_CBAJ_G0024561.1 mouse_genomes_project 19 8387957 8427174 + MGP_CBAJ_P0050723 Vwce protein_coding protein_coding MGP_CBAJ_T0051333.1 MGP_CBAJ_G0024820.1 mouse_genomes_project 19 42387550 42424664 - MGP_CBAJ_P0051333 Cyp2c70 protein_coding protein_coding MGP_CBAJ_T0051334.1 MGP_CBAJ_G0024820.1 mouse_genomes_project 19 42387773 42424475 - MGP_CBAJ_P0051334 Cyp2c70 protein_coding unknown_likely_coding MGP_CBAJ_T0051335.1 MGP_CBAJ_G0024820.1 mouse_genomes_project 19 42401375 42424664 - MGP_CBAJ_P0051335 Cyp2c70 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051336.1 MGP_CBAJ_G0024820.1 mouse_genomes_project 19 42402450 42424664 - MGP_CBAJ_P0051336 Cyp2c70 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051337.1 MGP_CBAJ_G0024820.1 mouse_genomes_project 19 42417022 42424711 - Cyp2c70 protein_coding retained_intron MGP_CBAJ_T0051684.1 MGP_CBAJ_G0024930.1 mouse_genomes_project 19 50334376 50346879 + MGP_CBAJ_P0051684 Ina protein_coding protein_coding MGP_CBAJ_T0049954.1 MGP_CBAJ_G0024337.1 mouse_genomes_project 19 790399 809351 - MGP_CBAJ_P0049954 Aldh3b1 protein_coding protein_coding MGP_CBAJ_T0049966.1 MGP_CBAJ_G0024343.1 mouse_genomes_project 19 908861 910385 + MGP_CBAJ_P0049966 Nudt8 protein_coding protein_coding MGP_CBAJ_T0049967.1 MGP_CBAJ_G0024343.1 mouse_genomes_project 19 908907 914114 + MGP_CBAJ_P0049967 Nudt8 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049968.1 MGP_CBAJ_G0024343.1 mouse_genomes_project 19 908912 910383 + MGP_CBAJ_P0049968 Nudt8 protein_coding protein_coding MGP_CBAJ_T0050888.1 MGP_CBAJ_G0024634.1 mouse_genomes_project 19 11112014 11112962 + MGP_CBAJ_P0050888 Olfr1449 protein_coding protein_coding MGP_CBAJ_T0013190.1 MGP_CBAJ_G0011302.1 mouse_genomes_project 19 2542239 2542434 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0051470.1 MGP_CBAJ_G0024863.1 mouse_genomes_project 19 46141453 46171245 - MGP_CBAJ_P0051470 Got1 protein_coding protein_coding MGP_CBAJ_T0051471.1 MGP_CBAJ_G0024863.1 mouse_genomes_project 19 46141722 46159660 - MGP_CBAJ_P0051471 Got1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051472.1 MGP_CBAJ_G0024863.1 mouse_genomes_project 19 46142018 46148545 - Got1 protein_coding retained_intron MGP_CBAJ_T0051473.1 MGP_CBAJ_G0024863.1 mouse_genomes_project 19 46155888 46171125 - Got1 protein_coding processed_transcript MGP_CBAJ_T0049927.1 MGP_CBAJ_G0024334.1 mouse_genomes_project 19 722739 767288 + MGP_CBAJ_P0049927 Chka protein_coding nonsense_mediated_decay MGP_CBAJ_T0049928.1 MGP_CBAJ_G0024334.1 mouse_genomes_project 19 722763 767292 + MGP_CBAJ_P0049928 Chka protein_coding protein_coding MGP_CBAJ_T0049929.1 MGP_CBAJ_G0024334.1 mouse_genomes_project 19 722776 744832 + Chka protein_coding retained_intron MGP_CBAJ_T0049930.1 MGP_CBAJ_G0024334.1 mouse_genomes_project 19 722776 767290 + Chka protein_coding retained_intron MGP_CBAJ_T0049931.1 MGP_CBAJ_G0024334.1 mouse_genomes_project 19 722798 740593 + Chka protein_coding retained_intron MGP_CBAJ_T0049932.1 MGP_CBAJ_G0024334.1 mouse_genomes_project 19 722798 751533 + Chka protein_coding retained_intron MGP_CBAJ_T0049933.1 MGP_CBAJ_G0024334.1 mouse_genomes_project 19 723042 767287 + MGP_CBAJ_P0049933 Chka protein_coding protein_coding MGP_CBAJ_T0049934.1 MGP_CBAJ_G0024334.1 mouse_genomes_project 19 723067 758787 + MGP_CBAJ_P0049934 Chka protein_coding nonsense_mediated_decay MGP_CBAJ_T0049935.1 MGP_CBAJ_G0024334.1 mouse_genomes_project 19 723329 760373 + MGP_CBAJ_P0049935 Chka protein_coding protein_coding MGP_CBAJ_T0049936.1 MGP_CBAJ_G0024334.1 mouse_genomes_project 19 747582 762857 + MGP_CBAJ_P0049936 Chka protein_coding nonsense_mediated_decay MGP_CBAJ_T0049937.1 MGP_CBAJ_G0024334.1 mouse_genomes_project 19 748283 757508 + Chka protein_coding processed_transcript MGP_CBAJ_T0049938.1 MGP_CBAJ_G0024334.1 mouse_genomes_project 19 748297 757461 + Chka protein_coding retained_intron MGP_CBAJ_T0049939.1 MGP_CBAJ_G0024334.1 mouse_genomes_project 19 748323 759339 + Chka protein_coding processed_transcript MGP_CBAJ_T0049940.1 MGP_CBAJ_G0024334.1 mouse_genomes_project 19 764653 766580 + Chka protein_coding retained_intron MGP_CBAJ_T0010160.1 MGP_CBAJ_G0008298.1 mouse_genomes_project 19 1630498 1630556 - Mir6986 miRNA miRNA MGP_CBAJ_T0003787.1 MGP_CBAJ_G0003390.1 mouse_genomes_project 19 22065674 22072629 - antisense antisense MGP_CBAJ_T0003788.1 MGP_CBAJ_G0003390.1 mouse_genomes_project 19 22065704 22073352 - antisense antisense MGP_CBAJ_T0051907.1 MGP_CBAJ_G0025003.1 mouse_genomes_project 19 65550436 65552002 - MGP_CBAJ_P0051907 Prlhr protein_coding protein_coding MGP_CBAJ_T0050321.1 MGP_CBAJ_G0024453.1 mouse_genomes_project 19 3325618 3332413 + MGP_CBAJ_P0050321 Cdca5 protein_coding protein_coding MGP_CBAJ_T0050322.1 MGP_CBAJ_G0024453.1 mouse_genomes_project 19 3326386 3332413 + Cdca5 protein_coding processed_transcript MGP_CBAJ_T0050323.1 MGP_CBAJ_G0024453.1 mouse_genomes_project 19 3326462 3332413 + Cdca5 protein_coding processed_transcript MGP_CBAJ_T0098298.1 MGP_CBAJ_G0036565.1 mouse_genomes_project 19 29050902 29053664 - 4933413C19Rik sense_intronic sense_intronic MGP_CBAJ_T0050236.1 MGP_CBAJ_G0024431.1 mouse_genomes_project 19 2912211 2913778 - MGP_CBAJ_P0050236 Fam89b protein_coding protein_coding MGP_CBAJ_T0050237.1 MGP_CBAJ_G0024431.1 mouse_genomes_project 19 2912211 2913758 - MGP_CBAJ_P0050237 Fam89b protein_coding protein_coding MGP_CBAJ_T0050238.1 MGP_CBAJ_G0024431.1 mouse_genomes_project 19 2912211 2913776 - MGP_CBAJ_P0050238 Fam89b protein_coding protein_coding MGP_CBAJ_T0099061.1 MGP_CBAJ_G0037316.1 mouse_genomes_project 19 4528431 4528535 + Gm22113 snRNA snRNA MGP_CBAJ_T0051805.1 MGP_CBAJ_G0024972.1 mouse_genomes_project 19 60852786 60898024 + MGP_CBAJ_P0051805 Habp2 protein_coding protein_coding MGP_CBAJ_T0051806.1 MGP_CBAJ_G0024972.1 mouse_genomes_project 19 60853570 60898756 + MGP_CBAJ_P0051806 Habp2 protein_coding protein_coding MGP_CBAJ_T0051807.1 MGP_CBAJ_G0024972.1 mouse_genomes_project 19 60853584 60887006 + Habp2 protein_coding processed_transcript MGP_CBAJ_T0051808.1 MGP_CBAJ_G0024972.1 mouse_genomes_project 19 60853644 60897570 + MGP_CBAJ_P0051808 Habp2 protein_coding protein_coding MGP_CBAJ_T0051809.1 MGP_CBAJ_G0024972.1 mouse_genomes_project 19 60853644 60894230 + MGP_CBAJ_P0051809 Habp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051810.1 MGP_CBAJ_G0024972.1 mouse_genomes_project 19 60886831 60894352 + MGP_CBAJ_P0051810 Habp2 protein_coding protein_coding MGP_CBAJ_T0051811.1 MGP_CBAJ_G0024972.1 mouse_genomes_project 19 60887963 60897564 + MGP_CBAJ_P0051811 Habp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050949.1 MGP_CBAJ_G0024678.1 mouse_genomes_project 19 17652101 17711792 - MGP_CBAJ_P0050949 protein_coding protein_coding MGP_CBAJ_T0050950.1 MGP_CBAJ_G0024678.1 mouse_genomes_project 19 17653765 17711743 - protein_coding retained_intron MGP_CBAJ_T0050951.1 MGP_CBAJ_G0024678.1 mouse_genomes_project 19 17669826 17711721 - protein_coding retained_intron MGP_CBAJ_T0051400.1 MGP_CBAJ_G0024842.1 mouse_genomes_project 19 44363556 44373673 - MGP_CBAJ_P0051400 Exosc1 protein_coding protein_coding MGP_CBAJ_T0051401.1 MGP_CBAJ_G0024842.1 mouse_genomes_project 19 44363556 44373673 - MGP_CBAJ_P0051401 Exosc1 protein_coding protein_coding MGP_CBAJ_T0051240.1 MGP_CBAJ_G0024783.1 mouse_genomes_project 19 38387313 38392230 - MGP_CBAJ_P0051240 Ppp1r3c protein_coding protein_coding MGP_CBAJ_T0051430.1 MGP_CBAJ_G0024850.1 mouse_genomes_project 19 44554781 44586059 + MGP_CBAJ_P0051430 Pi4k2a protein_coding protein_coding MGP_CBAJ_T0006986.1 MGP_CBAJ_G0005730.1 mouse_genomes_project 19 36471146 36475180 - Gm5248 lincRNA lincRNA MGP_CBAJ_T0100307.1 MGP_CBAJ_G0038562.1 mouse_genomes_project 19 1003485 1003700 - Gm23927 snoRNA snoRNA MGP_CBAJ_T0051173.1 MGP_CBAJ_G0024750.1 mouse_genomes_project 19 33471744 33507108 + MGP_CBAJ_P0051173 Minpp1 protein_coding protein_coding MGP_CBAJ_T0050562.1 MGP_CBAJ_G0024510.1 mouse_genomes_project 19 6158316 6174798 + MGP_CBAJ_P0050562 Chrm1 protein_coding protein_coding MGP_CBAJ_T0050563.1 MGP_CBAJ_G0024510.1 mouse_genomes_project 19 6160744 6180203 + MGP_CBAJ_P0050563 Chrm1 protein_coding protein_coding MGP_CBAJ_T0050564.1 MGP_CBAJ_G0024510.1 mouse_genomes_project 19 6160744 6178211 + MGP_CBAJ_P0050564 Chrm1 protein_coding protein_coding MGP_CBAJ_T0049897.1 MGP_CBAJ_G0024327.1 mouse_genomes_project 19 92818 163740 + MGP_CBAJ_P0049897 Cpt1a protein_coding protein_coding MGP_CBAJ_T0051572.1 MGP_CBAJ_G0024900.1 mouse_genomes_project 19 48614082 48631744 + MGP_CBAJ_P0051572 Gm17018 protein_coding protein_coding MGP_CBAJ_T0051574.1 MGP_CBAJ_G0024900.1 mouse_genomes_project 19 48631741 48633228 + Gm17018 protein_coding antisense MGP_CBAJ_T0098006.1 MGP_CBAJ_G0036279.1 mouse_genomes_project 19 37105093 37105224 - Gm22853 rRNA rRNA MGP_CBAJ_T0050271.1 MGP_CBAJ_G0024443.1 mouse_genomes_project 19 3283226 3290374 + MGP_CBAJ_P0050271 Syvn1 protein_coding protein_coding MGP_CBAJ_T0050272.1 MGP_CBAJ_G0024443.1 mouse_genomes_project 19 3283288 3285853 + MGP_CBAJ_P0050272 Syvn1 protein_coding protein_coding MGP_CBAJ_T0050273.1 MGP_CBAJ_G0024443.1 mouse_genomes_project 19 3283312 3290371 + MGP_CBAJ_P0050273 Syvn1 protein_coding protein_coding MGP_CBAJ_T0050274.1 MGP_CBAJ_G0024443.1 mouse_genomes_project 19 3283715 3290373 + Syvn1 protein_coding retained_intron MGP_CBAJ_T0050275.1 MGP_CBAJ_G0024443.1 mouse_genomes_project 19 3283730 3290371 + MGP_CBAJ_P0050275 Syvn1 protein_coding protein_coding MGP_CBAJ_T0050276.1 MGP_CBAJ_G0024443.1 mouse_genomes_project 19 3283735 3286301 + Syvn1 protein_coding retained_intron MGP_CBAJ_T0050277.1 MGP_CBAJ_G0024443.1 mouse_genomes_project 19 3283754 3290371 + MGP_CBAJ_P0050277 Syvn1 protein_coding protein_coding MGP_CBAJ_T0050360.1 MGP_CBAJ_G0024465.1 mouse_genomes_project 19 3611712 3617621 + MGP_CBAJ_P0050360 Men1 protein_coding protein_coding MGP_CBAJ_T0050361.1 MGP_CBAJ_G0024465.1 mouse_genomes_project 19 3611712 3617610 + MGP_CBAJ_P0050361 Men1 protein_coding protein_coding MGP_CBAJ_T0050362.1 MGP_CBAJ_G0024465.1 mouse_genomes_project 19 3611746 3617619 + MGP_CBAJ_P0050362 Men1 protein_coding protein_coding MGP_CBAJ_T0050363.1 MGP_CBAJ_G0024465.1 mouse_genomes_project 19 3611772 3617619 + MGP_CBAJ_P0050363 Men1 protein_coding protein_coding MGP_CBAJ_T0050364.1 MGP_CBAJ_G0024465.1 mouse_genomes_project 19 3611772 3617619 + MGP_CBAJ_P0050364 Men1 protein_coding protein_coding MGP_CBAJ_T0050365.1 MGP_CBAJ_G0024465.1 mouse_genomes_project 19 3611779 3617620 + Men1 protein_coding retained_intron MGP_CBAJ_T0050366.1 MGP_CBAJ_G0024465.1 mouse_genomes_project 19 3611780 3617513 + MGP_CBAJ_P0050366 Men1 protein_coding protein_coding MGP_CBAJ_T0050367.1 MGP_CBAJ_G0024465.1 mouse_genomes_project 19 3611797 3617195 + MGP_CBAJ_P0050367 Men1 protein_coding protein_coding MGP_CBAJ_T0050368.1 MGP_CBAJ_G0024465.1 mouse_genomes_project 19 3611844 3617619 + MGP_CBAJ_P0050368 Men1 protein_coding protein_coding MGP_CBAJ_T0050369.1 MGP_CBAJ_G0024465.1 mouse_genomes_project 19 3612194 3616904 + MGP_CBAJ_P0050369 Men1 protein_coding protein_coding MGP_CBAJ_T0050370.1 MGP_CBAJ_G0024465.1 mouse_genomes_project 19 3613643 3615140 + MGP_CBAJ_P0050370 Men1 protein_coding protein_coding MGP_CBAJ_T0050371.1 MGP_CBAJ_G0024465.1 mouse_genomes_project 19 3616578 3617542 + MGP_CBAJ_P0050371 Men1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051307.1 MGP_CBAJ_G0024804.1 mouse_genomes_project 19 40781527 40817186 - MGP_CBAJ_P0051307 Noc3l protein_coding protein_coding MGP_CBAJ_T0100334.1 MGP_CBAJ_G0038589.1 mouse_genomes_project 19 60843205 60843333 - Gm22271 snoRNA snoRNA MGP_CBAJ_T0003804.1 MGP_CBAJ_G0003403.1 mouse_genomes_project 19 63013340 63047306 + Gm16277 antisense antisense MGP_CBAJ_T0100327.1 MGP_CBAJ_G0038582.1 mouse_genomes_project 19 36649826 36649958 + Gm24006 snoRNA snoRNA MGP_CBAJ_T0050843.1 MGP_CBAJ_G0024604.1 mouse_genomes_project 19 9844778 9883674 + MGP_CBAJ_P0050843 Patl1 protein_coding protein_coding MGP_CBAJ_T0050675.1 MGP_CBAJ_G0024541.1 mouse_genomes_project 19 7684203 7686593 + MGP_CBAJ_P0050675 Fth1 protein_coding protein_coding MGP_CBAJ_T0011356.1 MGP_CBAJ_G0009494.1 mouse_genomes_project 19 40906063 40906183 + Gm25838 misc_RNA misc_RNA MGP_CBAJ_T0051520.1 MGP_CBAJ_G0024878.1 mouse_genomes_project 19 46948978 46999218 + MGP_CBAJ_P0051520 Scd3 protein_coding protein_coding MGP_CBAJ_T0051521.1 MGP_CBAJ_G0024878.1 mouse_genomes_project 19 46963404 46997071 + MGP_CBAJ_P0051521 Scd3 protein_coding unknown_likely_coding MGP_CBAJ_T0051272.1 MGP_CBAJ_G0024790.1 mouse_genomes_project 19 39138884 39196670 + MGP_CBAJ_P0051272 Kif11 protein_coding protein_coding MGP_CBAJ_T0051329.1 MGP_CBAJ_G0024816.1 mouse_genomes_project 19 42015035 42066410 - MGP_CBAJ_P0051329 protein_coding protein_coding MGP_CBAJ_T0003773.1 MGP_CBAJ_G0003381.1 mouse_genomes_project 19 3048093 3053857 + Frmd8os antisense antisense MGP_CBAJ_T0003774.1 MGP_CBAJ_G0003381.1 mouse_genomes_project 19 3050976 3053841 + Frmd8os antisense antisense MGP_CBAJ_T0006991.1 MGP_CBAJ_G0005734.1 mouse_genomes_project 19 42877764 42883193 + Gm27042 lincRNA lincRNA MGP_CBAJ_T0050220.1 MGP_CBAJ_G0024427.1 mouse_genomes_project 19 2839580 2866448 - MGP_CBAJ_P0050220 Pcnx3 protein_coding protein_coding MGP_CBAJ_T0050221.1 MGP_CBAJ_G0024427.1 mouse_genomes_project 19 2839583 2848891 - Pcnx3 protein_coding retained_intron MGP_CBAJ_T0050222.1 MGP_CBAJ_G0024427.1 mouse_genomes_project 19 2839585 2865689 - MGP_CBAJ_P0050222 Pcnx3 protein_coding protein_coding MGP_CBAJ_T0050223.1 MGP_CBAJ_G0024427.1 mouse_genomes_project 19 2840181 2841144 - Pcnx3 protein_coding retained_intron MGP_CBAJ_T0050224.1 MGP_CBAJ_G0024427.1 mouse_genomes_project 19 2840361 2841928 - MGP_CBAJ_P0050224 Pcnx3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050225.1 MGP_CBAJ_G0024427.1 mouse_genomes_project 19 2840936 2841472 - Pcnx3 protein_coding retained_intron MGP_CBAJ_T0050226.1 MGP_CBAJ_G0024427.1 mouse_genomes_project 19 2848235 2859067 - MGP_CBAJ_P0050226 Pcnx3 protein_coding protein_coding MGP_CBAJ_T0050227.1 MGP_CBAJ_G0024427.1 mouse_genomes_project 19 2849866 2853968 - MGP_CBAJ_P0050227 Pcnx3 protein_coding protein_coding MGP_CBAJ_T0050228.1 MGP_CBAJ_G0024427.1 mouse_genomes_project 19 2853373 2857742 - MGP_CBAJ_P0050228 Pcnx3 protein_coding protein_coding MGP_CBAJ_T0050229.1 MGP_CBAJ_G0024427.1 mouse_genomes_project 19 2853793 2858272 - MGP_CBAJ_P0050229 Pcnx3 protein_coding protein_coding MGP_CBAJ_T0050230.1 MGP_CBAJ_G0024427.1 mouse_genomes_project 19 2854324 2855927 - Pcnx3 protein_coding retained_intron MGP_CBAJ_T0050231.1 MGP_CBAJ_G0024427.1 mouse_genomes_project 19 2858139 2866235 - Pcnx3 protein_coding retained_intron MGP_CBAJ_T0050207.1 MGP_CBAJ_G0024421.1 mouse_genomes_project 19 2703200 2714655 - MGP_CBAJ_P0050207 Ovol1 protein_coding protein_coding MGP_CBAJ_T0013218.1 MGP_CBAJ_G0011330.1 mouse_genomes_project 19 55699126 55699504 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013200.1 MGP_CBAJ_G0011312.1 mouse_genomes_project 19 12481417 12482206 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0017420.1 MGP_CBAJ_G0015118.1 mouse_genomes_project 19 3541018 3550825 - Gm14963 processed_transcript processed_transcript MGP_CBAJ_T0003785.1 MGP_CBAJ_G0003389.1 mouse_genomes_project 19 10832491 10849430 - Gm15962 antisense antisense MGP_CBAJ_T0003786.1 MGP_CBAJ_G0003389.1 mouse_genomes_project 19 10844021 10849474 - Gm15962 antisense antisense MGP_CBAJ_T0051886.1 MGP_CBAJ_G0024991.1 mouse_genomes_project 19 63640000 63660996 + MGP_CBAJ_P0051886 Pnliprp2 protein_coding protein_coding MGP_CBAJ_T0050205.1 MGP_CBAJ_G0024419.1 mouse_genomes_project 19 2633871 2656521 - MGP_CBAJ_P0050205 Snx32 protein_coding protein_coding MGP_CBAJ_T0050093.1 MGP_CBAJ_G0024375.1 mouse_genomes_project 19 1728005 1768967 + MGP_CBAJ_P0050093 Sptbn2 protein_coding protein_coding MGP_CBAJ_T0050705.1 MGP_CBAJ_G0024551.1 mouse_genomes_project 19 8117402 8184978 + MGP_CBAJ_P0050705 Syt7 protein_coding protein_coding MGP_CBAJ_T0050706.1 MGP_CBAJ_G0024551.1 mouse_genomes_project 19 8117402 8184978 + MGP_CBAJ_P0050706 Syt7 protein_coding protein_coding MGP_CBAJ_T0050707.1 MGP_CBAJ_G0024551.1 mouse_genomes_project 19 8117402 8184978 + MGP_CBAJ_P0050707 Syt7 protein_coding protein_coding MGP_CBAJ_T0050708.1 MGP_CBAJ_G0024551.1 mouse_genomes_project 19 8117793 8154822 + MGP_CBAJ_P0050708 Syt7 protein_coding unknown_likely_coding MGP_CBAJ_T0010186.1 MGP_CBAJ_G0008324.1 mouse_genomes_project 19 36720952 36721022 - Gm23075 miRNA miRNA MGP_CBAJ_T0010200.1 MGP_CBAJ_G0008338.1 mouse_genomes_project 19 53895103 53895228 + Gm27749 miRNA miRNA MGP_CBAJ_T0051818.1 MGP_CBAJ_G0024974.1 mouse_genomes_project 19 60988505 61037465 + MGP_CBAJ_P0051818 Casp7 protein_coding protein_coding MGP_CBAJ_T0051276.1 MGP_CBAJ_G0024794.1 mouse_genomes_project 19 39507921 39511643 + MGP_CBAJ_P0051276 Cyp26a1 protein_coding protein_coding MGP_CBAJ_T0003802.1 MGP_CBAJ_G0003401.1 mouse_genomes_project 19 58053219 58061903 - Gm16299 antisense antisense MGP_CBAJ_T0013222.1 MGP_CBAJ_G0011334.1 mouse_genomes_project 19 65940959 65941327 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0051828.1 MGP_CBAJ_G0024977.1 mouse_genomes_project 19 61167740 61222858 + MGP_CBAJ_P0051828 Nhlrc2 protein_coding protein_coding MGP_CBAJ_T0051897.1 MGP_CBAJ_G0024997.1 mouse_genomes_project 19 64163268 64182327 + MGP_CBAJ_P0051897 Kcnk18 protein_coding protein_coding MGP_CBAJ_T0051517.1 MGP_CBAJ_G0024877.1 mouse_genomes_project 19 46889577 46936486 - MGP_CBAJ_P0051517 Pkd2l1 protein_coding protein_coding MGP_CBAJ_T0051518.1 MGP_CBAJ_G0024877.1 mouse_genomes_project 19 46889578 46936486 - Pkd2l1 protein_coding retained_intron MGP_CBAJ_T0051519.1 MGP_CBAJ_G0024877.1 mouse_genomes_project 19 46890447 46939263 - MGP_CBAJ_P0051519 Pkd2l1 protein_coding unknown_likely_coding MGP_CBAJ_T0051174.1 MGP_CBAJ_G0024751.1 mouse_genomes_project 19 33631629 33687929 + MGP_CBAJ_P0051174 Papss2 protein_coding protein_coding MGP_CBAJ_T0051175.1 MGP_CBAJ_G0024751.1 mouse_genomes_project 19 33631796 33687936 + MGP_CBAJ_P0051175 Papss2 protein_coding unknown_likely_coding MGP_CBAJ_T0050921.1 MGP_CBAJ_G0024667.1 mouse_genomes_project 19 12965433 13129917 - MGP_CBAJ_P0050921 Tle4 protein_coding protein_coding MGP_CBAJ_T0050922.1 MGP_CBAJ_G0024667.1 mouse_genomes_project 19 12965511 13129985 - MGP_CBAJ_P0050922 Tle4 protein_coding protein_coding MGP_CBAJ_T0050266.1 MGP_CBAJ_G0024440.1 mouse_genomes_project 19 3159167 3184411 - MGP_CBAJ_P0050266 Pola2 protein_coding protein_coding MGP_CBAJ_T0050267.1 MGP_CBAJ_G0024440.1 mouse_genomes_project 19 3159729 3184411 - MGP_CBAJ_P0050267 Pola2 protein_coding protein_coding MGP_CBAJ_T0050853.1 MGP_CBAJ_G0024614.1 mouse_genomes_project 19 10402621 10403802 - MGP_CBAJ_P0050853 Olfr1437 protein_coding protein_coding MGP_CBAJ_T0051424.1 MGP_CBAJ_G0024847.1 mouse_genomes_project 19 44510166 44516845 + Hoga1 protein_coding processed_transcript MGP_CBAJ_T0051425.1 MGP_CBAJ_G0024847.1 mouse_genomes_project 19 44510348 44535089 + MGP_CBAJ_P0051425 Hoga1 protein_coding protein_coding MGP_CBAJ_T0051426.1 MGP_CBAJ_G0024847.1 mouse_genomes_project 19 44510407 44524725 + Hoga1 protein_coding retained_intron MGP_CBAJ_T0051427.1 MGP_CBAJ_G0024847.1 mouse_genomes_project 19 44510474 44535064 + MGP_CBAJ_P0051427 Hoga1 protein_coding protein_coding MGP_CBAJ_T0050655.1 MGP_CBAJ_G0024531.1 mouse_genomes_project 19 6468448 6470423 - MGP_CBAJ_P0050655 Rom1 protein_coding protein_coding MGP_CBAJ_T0010201.1 MGP_CBAJ_G0008339.1 mouse_genomes_project 19 57064689 57064790 - Mir6407 miRNA miRNA MGP_CBAJ_T0051481.1 MGP_CBAJ_G0024867.1 mouse_genomes_project 19 46409761 46437388 - MGP_CBAJ_P0051481 Cox15 protein_coding protein_coding MGP_CBAJ_T0051482.1 MGP_CBAJ_G0024867.1 mouse_genomes_project 19 46416292 46419870 - Cox15 protein_coding retained_intron MGP_CBAJ_T0051602.1 MGP_CBAJ_G0024906.1 mouse_genomes_project 19 48922903 49138269 - MGP_CBAJ_P0051602 9130011E15Rik protein_coding protein_coding MGP_CBAJ_T0051005.1 MGP_CBAJ_G0024698.1 mouse_genomes_project 19 23394383 23499777 - MGP_CBAJ_P0051005 1700028P14Rik protein_coding protein_coding MGP_CBAJ_T0050841.1 MGP_CBAJ_G0024602.1 mouse_genomes_project 19 9794531 9795691 - MGP_CBAJ_P0050841 Olfr1419 protein_coding protein_coding MGP_CBAJ_T0050871.1 MGP_CBAJ_G0024625.1 mouse_genomes_project 19 10822059 10848128 + MGP_CBAJ_P0050871 Keg1 protein_coding protein_coding MGP_CBAJ_T0050872.1 MGP_CBAJ_G0024625.1 mouse_genomes_project 19 10822060 10844279 + Keg1 protein_coding processed_transcript MGP_CBAJ_T0050873.1 MGP_CBAJ_G0024625.1 mouse_genomes_project 19 10822066 10846796 + Keg1 protein_coding retained_intron MGP_CBAJ_T0050874.1 MGP_CBAJ_G0024625.1 mouse_genomes_project 19 10822066 10847233 + MGP_CBAJ_P0050874 Keg1 protein_coding protein_coding MGP_CBAJ_T0050875.1 MGP_CBAJ_G0024625.1 mouse_genomes_project 19 10822077 10843063 + Keg1 protein_coding retained_intron MGP_CBAJ_T0050876.1 MGP_CBAJ_G0024625.1 mouse_genomes_project 19 10822087 10842985 + Keg1 protein_coding retained_intron MGP_CBAJ_T0050877.1 MGP_CBAJ_G0024625.1 mouse_genomes_project 19 10822087 10847343 + MGP_CBAJ_P0050877 Keg1 protein_coding protein_coding MGP_CBAJ_T0051136.1 MGP_CBAJ_G0024741.1 mouse_genomes_project 19 30703840 30732104 + Uhrf2 protein_coding retained_intron MGP_CBAJ_T0051137.1 MGP_CBAJ_G0024741.1 mouse_genomes_project 19 30703840 30754771 + Uhrf2 protein_coding retained_intron MGP_CBAJ_T0051138.1 MGP_CBAJ_G0024741.1 mouse_genomes_project 19 30703840 30767018 + MGP_CBAJ_P0051138 Uhrf2 protein_coding protein_coding MGP_CBAJ_T0051139.1 MGP_CBAJ_G0024741.1 mouse_genomes_project 19 30703916 30730455 + MGP_CBAJ_P0051139 Uhrf2 protein_coding protein_coding MGP_CBAJ_T0051140.1 MGP_CBAJ_G0024741.1 mouse_genomes_project 19 30747040 30748773 + Uhrf2 protein_coding retained_intron MGP_CBAJ_T0051141.1 MGP_CBAJ_G0024741.1 mouse_genomes_project 19 30751755 30753497 + Uhrf2 protein_coding retained_intron MGP_CBAJ_T0051142.1 MGP_CBAJ_G0024741.1 mouse_genomes_project 19 30758937 30760612 + Uhrf2 protein_coding retained_intron MGP_CBAJ_T0051143.1 MGP_CBAJ_G0024741.1 mouse_genomes_project 19 30762351 30767018 + Uhrf2 protein_coding retained_intron MGP_CBAJ_T0051144.1 MGP_CBAJ_G0024741.1 mouse_genomes_project 19 30765256 30766235 + Uhrf2 protein_coding retained_intron MGP_CBAJ_T0013206.1 MGP_CBAJ_G0011318.1 mouse_genomes_project 19 24647836 24648826 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0051004.1 MGP_CBAJ_G0024697.1 mouse_genomes_project 19 23080145 23265337 - MGP_CBAJ_P0051004 Mamdc2 protein_coding protein_coding MGP_CBAJ_T0050326.1 MGP_CBAJ_G0024456.1 mouse_genomes_project 19 3368644 3383434 - MGP_CBAJ_P0050326 Snx15 protein_coding protein_coding MGP_CBAJ_T0050327.1 MGP_CBAJ_G0024456.1 mouse_genomes_project 19 3369097 3383277 - MGP_CBAJ_P0050327 Snx15 protein_coding protein_coding MGP_CBAJ_T0050328.1 MGP_CBAJ_G0024456.1 mouse_genomes_project 19 3369877 3370888 - Snx15 protein_coding retained_intron MGP_CBAJ_T0050329.1 MGP_CBAJ_G0024456.1 mouse_genomes_project 19 3369877 3382937 - Snx15 protein_coding processed_transcript MGP_CBAJ_T0050330.1 MGP_CBAJ_G0024456.1 mouse_genomes_project 19 3370737 3371533 - Snx15 protein_coding processed_transcript MGP_CBAJ_T0050331.1 MGP_CBAJ_G0024456.1 mouse_genomes_project 19 3371150 3383263 - Snx15 protein_coding retained_intron MGP_CBAJ_T0050332.1 MGP_CBAJ_G0024456.1 mouse_genomes_project 19 3371172 3383295 - MGP_CBAJ_P0050332 Snx15 protein_coding protein_coding MGP_CBAJ_T0051551.1 MGP_CBAJ_G0024890.1 mouse_genomes_project 19 47951419 47952848 - MGP_CBAJ_P0051551 Mrpl43 protein_coding protein_coding MGP_CBAJ_T0051647.1 MGP_CBAJ_G0024915.1 mouse_genomes_project 19 49499732 49505522 - MGP_CBAJ_P0051647 Psd protein_coding unknown_likely_coding MGP_CBAJ_T0051648.1 MGP_CBAJ_G0024915.1 mouse_genomes_project 19 49499739 49514830 - MGP_CBAJ_P0051648 Psd protein_coding protein_coding MGP_CBAJ_T0051649.1 MGP_CBAJ_G0024915.1 mouse_genomes_project 19 49499739 49514830 - MGP_CBAJ_P0051649 Psd protein_coding protein_coding MGP_CBAJ_T0051658.1 MGP_CBAJ_G0024920.1 mouse_genomes_project 19 49593592 49704969 + MGP_CBAJ_P0051658 Sufu protein_coding protein_coding MGP_CBAJ_T0051659.1 MGP_CBAJ_G0024920.1 mouse_genomes_project 19 49593614 49702214 + MGP_CBAJ_P0051659 Sufu protein_coding protein_coding MGP_CBAJ_T0051660.1 MGP_CBAJ_G0024920.1 mouse_genomes_project 19 49593700 49667008 + MGP_CBAJ_P0051660 Sufu protein_coding protein_coding MGP_CBAJ_T0051661.1 MGP_CBAJ_G0024920.1 mouse_genomes_project 19 49593722 49693104 + MGP_CBAJ_P0051661 Sufu protein_coding protein_coding MGP_CBAJ_T0051662.1 MGP_CBAJ_G0024920.1 mouse_genomes_project 19 49669206 49691805 + Sufu protein_coding processed_transcript MGP_CBAJ_T0051663.1 MGP_CBAJ_G0024920.1 mouse_genomes_project 19 49699264 49702148 + Sufu protein_coding retained_intron MGP_CBAJ_T0051475.1 MGP_CBAJ_G0024865.1 mouse_genomes_project 19 46325281 46339655 - MGP_CBAJ_P0051475 Slc25a28 protein_coding protein_coding MGP_CBAJ_T0010188.1 MGP_CBAJ_G0008326.1 mouse_genomes_project 19 43227079 43227166 + Mir8092 miRNA miRNA MGP_CBAJ_T0050920.1 MGP_CBAJ_G0024666.1 mouse_genomes_project 19 12346575 12347660 - MGP_CBAJ_P0050920 Olfr1504 protein_coding protein_coding MGP_CBAJ_T0010176.1 MGP_CBAJ_G0008314.1 mouse_genomes_project 19 16880491 16880584 - Gm23063 miRNA miRNA MGP_CBAJ_T0100312.1 MGP_CBAJ_G0038567.1 mouse_genomes_project 19 6226410 6226475 + Gm22744 snoRNA snoRNA MGP_CBAJ_T0051241.1 MGP_CBAJ_G0024784.1 mouse_genomes_project 19 38525109 38584329 + MGP_CBAJ_P0051241 Tnks2 protein_coding protein_coding MGP_CBAJ_T0051242.1 MGP_CBAJ_G0024784.1 mouse_genomes_project 19 38525281 38546800 + Tnks2 protein_coding processed_transcript MGP_CBAJ_T0051243.1 MGP_CBAJ_G0024784.1 mouse_genomes_project 19 38540163 38545855 + Tnks2 protein_coding retained_intron MGP_CBAJ_T0051244.1 MGP_CBAJ_G0024784.1 mouse_genomes_project 19 38548375 38553198 + Tnks2 protein_coding retained_intron MGP_CBAJ_T0051245.1 MGP_CBAJ_G0024784.1 mouse_genomes_project 19 38548758 38563336 + MGP_CBAJ_P0051245 Tnks2 protein_coding protein_coding MGP_CBAJ_T0051246.1 MGP_CBAJ_G0024784.1 mouse_genomes_project 19 38549971 38557160 + MGP_CBAJ_P0051246 Tnks2 protein_coding protein_coding MGP_CBAJ_T0051247.1 MGP_CBAJ_G0024784.1 mouse_genomes_project 19 38562623 38574969 + MGP_CBAJ_P0051247 Tnks2 protein_coding protein_coding MGP_CBAJ_T0051248.1 MGP_CBAJ_G0024784.1 mouse_genomes_project 19 38569390 38573965 + Tnks2 protein_coding retained_intron MGP_CBAJ_T0051249.1 MGP_CBAJ_G0024784.1 mouse_genomes_project 19 38571456 38578272 + Tnks2 protein_coding retained_intron MGP_CBAJ_T0010190.1 MGP_CBAJ_G0008328.1 mouse_genomes_project 19 44758633 44758730 + Gm26339 miRNA miRNA MGP_CBAJ_T0051280.1 MGP_CBAJ_G0024796.1 mouse_genomes_project 19 39915986 39934942 + MGP_CBAJ_P0051280 Cep55 protein_coding protein_coding MGP_CBAJ_T0051281.1 MGP_CBAJ_G0024796.1 mouse_genomes_project 19 39916001 39934015 + MGP_CBAJ_P0051281 Cep55 protein_coding protein_coding MGP_CBAJ_T0051282.1 MGP_CBAJ_G0024796.1 mouse_genomes_project 19 39916003 39934942 + MGP_CBAJ_P0051282 Cep55 protein_coding protein_coding MGP_CBAJ_T0051079.1 MGP_CBAJ_G0024723.1 mouse_genomes_project 19 29408293 29431998 - MGP_CBAJ_P0051079 4430402I18Rik protein_coding protein_coding MGP_CBAJ_T0051081.1 MGP_CBAJ_G0024723.1 mouse_genomes_project 19 29418594 29489714 - MGP_CBAJ_P0051081 4430402I18Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0051082.1 MGP_CBAJ_G0024723.1 mouse_genomes_project 19 29443183 29486138 - MGP_CBAJ_P0051082 4430402I18Rik protein_coding protein_coding MGP_CBAJ_T0051083.1 MGP_CBAJ_G0024723.1 mouse_genomes_project 19 29443649 29489784 - MGP_CBAJ_P0051083 4430402I18Rik protein_coding protein_coding MGP_CBAJ_T0051084.1 MGP_CBAJ_G0024723.1 mouse_genomes_project 19 29443652 29449347 - 4430402I18Rik protein_coding processed_transcript MGP_CBAJ_T0051085.1 MGP_CBAJ_G0024723.1 mouse_genomes_project 19 29443807 29485569 - MGP_CBAJ_P0051085 4430402I18Rik protein_coding protein_coding MGP_CBAJ_T0051086.1 MGP_CBAJ_G0024723.1 mouse_genomes_project 19 29443807 29485569 - MGP_CBAJ_P0051086 4430402I18Rik protein_coding protein_coding MGP_CBAJ_T0051087.1 MGP_CBAJ_G0024723.1 mouse_genomes_project 19 29470716 29485892 - MGP_CBAJ_P0051087 4430402I18Rik protein_coding protein_coding MGP_CBAJ_T0003783.1 MGP_CBAJ_G0003387.1 mouse_genomes_project 19 9025997 9124908 + 4930526L06Rik antisense antisense MGP_CBAJ_T0051487.1 MGP_CBAJ_G0024869.1 mouse_genomes_project 19 46468255 46534760 + MGP_CBAJ_P0051487 Abcc2 protein_coding protein_coding MGP_CBAJ_T0051488.1 MGP_CBAJ_G0024869.1 mouse_genomes_project 19 46468389 46470720 + Abcc2 protein_coding retained_intron MGP_CBAJ_T0051489.1 MGP_CBAJ_G0024869.1 mouse_genomes_project 19 46468467 46531615 + MGP_CBAJ_P0051489 Abcc2 protein_coding unknown_likely_coding MGP_CBAJ_T0051490.1 MGP_CBAJ_G0024869.1 mouse_genomes_project 19 46489589 46492373 + Abcc2 protein_coding retained_intron MGP_CBAJ_T0051491.1 MGP_CBAJ_G0024869.1 mouse_genomes_project 19 46504713 46507593 + Abcc2 protein_coding retained_intron MGP_CBAJ_T0051492.1 MGP_CBAJ_G0024869.1 mouse_genomes_project 19 46532822 46534748 + MGP_CBAJ_P0051492 Abcc2 protein_coding protein_coding MGP_CBAJ_T0006980.1 MGP_CBAJ_G0005727.1 mouse_genomes_project 19 30068940 30106140 - A930007I19Rik lincRNA lincRNA MGP_CBAJ_T0006981.1 MGP_CBAJ_G0005727.1 mouse_genomes_project 19 30069519 30107239 - A930007I19Rik lincRNA lincRNA MGP_CBAJ_T0006982.1 MGP_CBAJ_G0005727.1 mouse_genomes_project 19 30087876 30106135 - A930007I19Rik lincRNA lincRNA MGP_CBAJ_T0051782.1 MGP_CBAJ_G0024970.1 mouse_genomes_project 19 59755533 60090294 + MGP_CBAJ_P0051782 Vti1a protein_coding protein_coding MGP_CBAJ_T0051783.1 MGP_CBAJ_G0024970.1 mouse_genomes_project 19 59755633 60091049 + MGP_CBAJ_P0051783 Vti1a protein_coding unknown_likely_coding MGP_CBAJ_T0051468.1 MGP_CBAJ_G0024862.1 mouse_genomes_project 19 46074218 46138919 + MGP_CBAJ_P0051468 Cnnm1 protein_coding protein_coding MGP_CBAJ_T0051469.1 MGP_CBAJ_G0024862.1 mouse_genomes_project 19 46074227 46138874 + MGP_CBAJ_P0051469 Cnnm1 protein_coding unknown_likely_coding MGP_CBAJ_T0051343.1 MGP_CBAJ_G0024822.1 mouse_genomes_project 19 42563400 42677805 - MGP_CBAJ_P0051343 Sorbs1 protein_coding protein_coding MGP_CBAJ_T0051344.1 MGP_CBAJ_G0024822.1 mouse_genomes_project 19 42563400 42677805 - MGP_CBAJ_P0051344 Sorbs1 protein_coding protein_coding MGP_CBAJ_T0051345.1 MGP_CBAJ_G0024822.1 mouse_genomes_project 19 42563400 42677805 - MGP_CBAJ_P0051345 Sorbs1 protein_coding protein_coding MGP_CBAJ_T0051346.1 MGP_CBAJ_G0024822.1 mouse_genomes_project 19 42563400 42677805 - MGP_CBAJ_P0051346 Sorbs1 protein_coding protein_coding MGP_CBAJ_T0051347.1 MGP_CBAJ_G0024822.1 mouse_genomes_project 19 42577840 42677805 - MGP_CBAJ_P0051347 Sorbs1 protein_coding unknown_likely_coding MGP_CBAJ_T0051467.1 MGP_CBAJ_G0024861.1 mouse_genomes_project 19 45326571 46018675 - MGP_CBAJ_P0051467 Hpse2 protein_coding protein_coding MGP_CBAJ_T0050234.1 MGP_CBAJ_G0024430.1 mouse_genomes_project 19 2884896 2910444 - MGP_CBAJ_P0050234 Ehbp1l1 protein_coding protein_coding MGP_CBAJ_T0050235.1 MGP_CBAJ_G0024430.1 mouse_genomes_project 19 2884896 2910444 - MGP_CBAJ_P0050235 Ehbp1l1 protein_coding protein_coding MGP_CBAJ_T0050120.1 MGP_CBAJ_G0024385.1 mouse_genomes_project 19 1925092 1951240 - MGP_CBAJ_P0050120 Bbs1 protein_coding protein_coding MGP_CBAJ_T0051696.1 MGP_CBAJ_G0024940.1 mouse_genomes_project 19 50629782 50855696 - MGP_CBAJ_P0051696 Sh3pxd2a protein_coding protein_coding MGP_CBAJ_T0051697.1 MGP_CBAJ_G0024940.1 mouse_genomes_project 19 50629782 50855696 - MGP_CBAJ_P0051697 Sh3pxd2a protein_coding protein_coding MGP_CBAJ_T0017398.1 MGP_CBAJ_G0015114.1 mouse_genomes_project 19 644275 723386 - Gm16066 processed_transcript processed_transcript MGP_CBAJ_T0050547.1 MGP_CBAJ_G0024503.1 mouse_genomes_project 19 4924889 4927078 + Hrasls5 protein_coding retained_intron MGP_CBAJ_T0050548.1 MGP_CBAJ_G0024503.1 mouse_genomes_project 19 4924903 4952837 + MGP_CBAJ_P0050548 Hrasls5 protein_coding protein_coding MGP_CBAJ_T0050549.1 MGP_CBAJ_G0024503.1 mouse_genomes_project 19 4924953 4953236 + MGP_CBAJ_P0050549 Hrasls5 protein_coding protein_coding MGP_CBAJ_T0050162.1 MGP_CBAJ_G0024407.1 mouse_genomes_project 19 2485684 2490387 + MGP_CBAJ_P0050162 Eif1ad protein_coding protein_coding MGP_CBAJ_T0051849.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61713486 61915051 - MGP_CBAJ_P0051849 Ablim1 protein_coding protein_coding MGP_CBAJ_T0051850.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61713643 61812071 - MGP_CBAJ_P0051850 Ablim1 protein_coding protein_coding MGP_CBAJ_T0051851.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61714019 61812071 - MGP_CBAJ_P0051851 Ablim1 protein_coding protein_coding MGP_CBAJ_T0051852.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61714026 61896988 - MGP_CBAJ_P0051852 Ablim1 protein_coding protein_coding MGP_CBAJ_T0051853.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61717031 61942907 - MGP_CBAJ_P0051853 Ablim1 protein_coding protein_coding MGP_CBAJ_T0051854.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61717174 61812069 - MGP_CBAJ_P0051854 Ablim1 protein_coding protein_coding MGP_CBAJ_T0051855.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61717235 61811975 - MGP_CBAJ_P0051855 Ablim1 protein_coding protein_coding MGP_CBAJ_T0051856.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61717452 61896813 - MGP_CBAJ_P0051856 Ablim1 protein_coding protein_coding MGP_CBAJ_T0051857.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61717734 61943439 - MGP_CBAJ_P0051857 Ablim1 protein_coding protein_coding MGP_CBAJ_T0051858.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61717772 61914984 - MGP_CBAJ_P0051858 Ablim1 protein_coding protein_coding MGP_CBAJ_T0051859.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61717908 61896748 - MGP_CBAJ_P0051859 Ablim1 protein_coding protein_coding MGP_CBAJ_T0051860.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61717950 61896853 - MGP_CBAJ_P0051860 Ablim1 protein_coding protein_coding MGP_CBAJ_T0051861.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61718019 62021991 - Ablim1 protein_coding retained_intron MGP_CBAJ_T0051862.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61720209 61728024 - Ablim1 protein_coding processed_transcript MGP_CBAJ_T0051863.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61721831 61725719 - Ablim1 protein_coding retained_intron MGP_CBAJ_T0051864.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61744478 61833192 - Ablim1 protein_coding retained_intron MGP_CBAJ_T0051865.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61760348 61833161 - Ablim1 protein_coding processed_transcript MGP_CBAJ_T0051866.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61809108 61812086 - Ablim1 protein_coding processed_transcript MGP_CBAJ_T0051867.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61828740 61833192 - Ablim1 protein_coding processed_transcript MGP_CBAJ_T0051868.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61829082 62021983 - MGP_CBAJ_P0051868 Ablim1 protein_coding protein_coding MGP_CBAJ_T0051869.1 MGP_CBAJ_G0024983.1 mouse_genomes_project 19 61829322 61881692 - MGP_CBAJ_P0051869 Ablim1 protein_coding protein_coding MGP_CBAJ_T0010198.1 MGP_CBAJ_G0008336.1 mouse_genomes_project 19 51380264 51380346 - Gm22240 miRNA miRNA MGP_CBAJ_T0051645.1 MGP_CBAJ_G0024914.1 mouse_genomes_project 19 49492530 49499743 + MGP_CBAJ_P0051645 Nfkb2 protein_coding protein_coding MGP_CBAJ_T0051646.1 MGP_CBAJ_G0024914.1 mouse_genomes_project 19 49493488 49499743 + MGP_CBAJ_P0051646 Nfkb2 protein_coding protein_coding MGP_CBAJ_T0051205.1 MGP_CBAJ_G0024768.1 mouse_genomes_project 19 35796206 35834370 - MGP_CBAJ_P0051205 Lipa protein_coding protein_coding MGP_CBAJ_T0051206.1 MGP_CBAJ_G0024768.1 mouse_genomes_project 19 35796206 35834370 - MGP_CBAJ_P0051206 Lipa protein_coding protein_coding MGP_CBAJ_T0050618.1 MGP_CBAJ_G0024517.1 mouse_genomes_project 19 6312952 6319654 - MGP_CBAJ_P0050618 Polr2g protein_coding protein_coding MGP_CBAJ_T0050095.1 MGP_CBAJ_G0024377.1 mouse_genomes_project 19 1773156 1781821 + Rbm4b protein_coding retained_intron MGP_CBAJ_T0050096.1 MGP_CBAJ_G0024377.1 mouse_genomes_project 19 1773178 1780287 + Rbm4b protein_coding retained_intron MGP_CBAJ_T0050097.1 MGP_CBAJ_G0024377.1 mouse_genomes_project 19 1773184 1784887 + MGP_CBAJ_P0050097 Rbm4b protein_coding protein_coding MGP_CBAJ_T0050098.1 MGP_CBAJ_G0024377.1 mouse_genomes_project 19 1773194 1783075 + MGP_CBAJ_P0050098 Rbm4b protein_coding nonsense_mediated_decay MGP_CBAJ_T0050099.1 MGP_CBAJ_G0024377.1 mouse_genomes_project 19 1780340 1786012 + Rbm4b protein_coding retained_intron MGP_CBAJ_T0050100.1 MGP_CBAJ_G0024377.1 mouse_genomes_project 19 1783409 1784588 + Rbm4b protein_coding processed_transcript MGP_CBAJ_T0017454.1 MGP_CBAJ_G0015126.1 mouse_genomes_project 19 26863937 26866535 - Gm20616 processed_transcript processed_transcript MGP_CBAJ_T0017455.1 MGP_CBAJ_G0015126.1 mouse_genomes_project 19 26864148 26866526 - Gm20616 processed_transcript processed_transcript MGP_CBAJ_T0051523.1 MGP_CBAJ_G0024880.1 mouse_genomes_project 19 47125987 47127619 + Scd4 protein_coding retained_intron MGP_CBAJ_T0051524.1 MGP_CBAJ_G0024880.1 mouse_genomes_project 19 47125987 47145601 + MGP_CBAJ_P0051524 Scd4 protein_coding protein_coding MGP_CBAJ_T0051380.1 MGP_CBAJ_G0024831.1 mouse_genomes_project 19 43438964 43571427 - MGP_CBAJ_P0051380 Tll2 protein_coding protein_coding MGP_CBAJ_T0051381.1 MGP_CBAJ_G0024831.1 mouse_genomes_project 19 43438964 43571427 - MGP_CBAJ_P0051381 Tll2 protein_coding protein_coding MGP_CBAJ_T0006962.1 MGP_CBAJ_G0005713.1 mouse_genomes_project 19 3243370 3249174 + Gm10814 lincRNA lincRNA MGP_CBAJ_T0050036.1 MGP_CBAJ_G0024359.1 mouse_genomes_project 19 1122731 1129400 - MGP_CBAJ_P0050036 Tbc1d10c protein_coding protein_coding MGP_CBAJ_T0003799.1 MGP_CBAJ_G0003398.1 mouse_genomes_project 19 48840670 48844160 + Gm15491 antisense antisense MGP_CBAJ_T0051348.1 MGP_CBAJ_G0024823.1 mouse_genomes_project 19 42835237 42876787 - MGP_CBAJ_P0051348 Aldh18a1 protein_coding protein_coding MGP_CBAJ_T0051349.1 MGP_CBAJ_G0024823.1 mouse_genomes_project 19 42835237 42876693 - MGP_CBAJ_P0051349 Aldh18a1 protein_coding protein_coding MGP_CBAJ_T0051350.1 MGP_CBAJ_G0024823.1 mouse_genomes_project 19 42836131 42839846 - Aldh18a1 protein_coding retained_intron MGP_CBAJ_T0051351.1 MGP_CBAJ_G0024823.1 mouse_genomes_project 19 42838407 42839724 - MGP_CBAJ_P0051351 Aldh18a1 protein_coding protein_coding MGP_CBAJ_T0051352.1 MGP_CBAJ_G0024823.1 mouse_genomes_project 19 42842053 42876747 - Aldh18a1 protein_coding retained_intron MGP_CBAJ_T0051353.1 MGP_CBAJ_G0024823.1 mouse_genomes_project 19 42862645 42876708 - MGP_CBAJ_P0051353 Aldh18a1 protein_coding protein_coding MGP_CBAJ_T0051354.1 MGP_CBAJ_G0024823.1 mouse_genomes_project 19 42865916 42876734 - MGP_CBAJ_P0051354 Aldh18a1 protein_coding protein_coding MGP_CBAJ_T0051355.1 MGP_CBAJ_G0024823.1 mouse_genomes_project 19 42865959 42876706 - MGP_CBAJ_P0051355 Aldh18a1 protein_coding protein_coding MGP_CBAJ_T0000981.1 MGP_CBAJ_G0000913.1 mouse_genomes_project 19 3003624 3004077 + TEC TEC MGP_CBAJ_T0010181.1 MGP_CBAJ_G0008319.1 mouse_genomes_project 19 34246767 34246857 + Mir3970 miRNA miRNA MGP_CBAJ_T0017450.1 MGP_CBAJ_G0015124.1 mouse_genomes_project 19 9342116 9363481 - processed_transcript antisense MGP_CBAJ_T0017451.1 MGP_CBAJ_G0015124.1 mouse_genomes_project 19 9356682 9363482 - processed_transcript antisense MGP_CBAJ_T0017452.1 MGP_CBAJ_G0015124.1 mouse_genomes_project 19 9356800 9363439 - processed_transcript retained_intron MGP_CBAJ_T0050538.1 MGP_CBAJ_G0024500.1 mouse_genomes_project 19 4796298 4848785 + MGP_CBAJ_P0050538 Atl3 protein_coding protein_coding MGP_CBAJ_T0050539.1 MGP_CBAJ_G0024500.1 mouse_genomes_project 19 4796696 4848785 + MGP_CBAJ_P0050539 Atl3 protein_coding protein_coding MGP_CBAJ_T0050498.1 MGP_CBAJ_G0024492.1 mouse_genomes_project 19 4479734 4487660 - MGP_CBAJ_P0050498 Otub1 protein_coding protein_coding MGP_CBAJ_T0050499.1 MGP_CBAJ_G0024492.1 mouse_genomes_project 19 4479742 4487578 - MGP_CBAJ_P0050499 Otub1 protein_coding protein_coding MGP_CBAJ_T0050500.1 MGP_CBAJ_G0024492.1 mouse_genomes_project 19 4481069 4481994 - Otub1 protein_coding retained_intron MGP_CBAJ_T0050501.1 MGP_CBAJ_G0024492.1 mouse_genomes_project 19 4481240 4487119 - MGP_CBAJ_P0050501 Otub1 protein_coding protein_coding MGP_CBAJ_T0050502.1 MGP_CBAJ_G0024492.1 mouse_genomes_project 19 4481270 4485763 - Otub1 protein_coding retained_intron MGP_CBAJ_T0051050.1 MGP_CBAJ_G0024717.1 mouse_genomes_project 19 27554625 27591824 + Vldlr protein_coding retained_intron MGP_CBAJ_T0051051.1 MGP_CBAJ_G0024717.1 mouse_genomes_project 19 27555161 27591931 + MGP_CBAJ_P0051051 Vldlr protein_coding protein_coding MGP_CBAJ_T0051052.1 MGP_CBAJ_G0024717.1 mouse_genomes_project 19 27555161 27572998 + MGP_CBAJ_P0051052 Vldlr protein_coding protein_coding MGP_CBAJ_T0051053.1 MGP_CBAJ_G0024717.1 mouse_genomes_project 19 27555498 27569912 + Vldlr protein_coding processed_transcript MGP_CBAJ_T0051054.1 MGP_CBAJ_G0024717.1 mouse_genomes_project 19 27555498 27591796 + MGP_CBAJ_P0051054 Vldlr protein_coding protein_coding MGP_CBAJ_T0051055.1 MGP_CBAJ_G0024717.1 mouse_genomes_project 19 27555498 27596300 + MGP_CBAJ_P0051055 Vldlr protein_coding protein_coding MGP_CBAJ_T0051056.1 MGP_CBAJ_G0024717.1 mouse_genomes_project 19 27555599 27591832 + MGP_CBAJ_P0051056 Vldlr protein_coding nonsense_mediated_decay MGP_CBAJ_T0051057.1 MGP_CBAJ_G0024717.1 mouse_genomes_project 19 27576915 27585897 + MGP_CBAJ_P0051057 Vldlr protein_coding protein_coding MGP_CBAJ_T0098160.1 MGP_CBAJ_G0036433.1 mouse_genomes_project 19 38869821 38869899 - Gm22714 ribozyme ribozyme MGP_CBAJ_T0050457.1 MGP_CBAJ_G0024474.1 mouse_genomes_project 19 4130981 4134262 - Prdx5 protein_coding retained_intron MGP_CBAJ_T0050458.1 MGP_CBAJ_G0024474.1 mouse_genomes_project 19 4130990 4134390 - MGP_CBAJ_P0050458 Prdx5 protein_coding protein_coding MGP_CBAJ_T0050459.1 MGP_CBAJ_G0024474.1 mouse_genomes_project 19 4131034 4132586 - MGP_CBAJ_P0050459 Prdx5 protein_coding protein_coding MGP_CBAJ_T0050460.1 MGP_CBAJ_G0024474.1 mouse_genomes_project 19 4131130 4133901 - MGP_CBAJ_P0050460 Prdx5 protein_coding protein_coding MGP_CBAJ_T0051457.1 MGP_CBAJ_G0024859.1 mouse_genomes_project 19 45247745 45281203 - MGP_CBAJ_P0051457 Pyroxd2 protein_coding protein_coding MGP_CBAJ_T0051604.1 MGP_CBAJ_G0024908.1 mouse_genomes_project 19 49185240 49198514 - MGP_CBAJ_P0051604 Ldb1 protein_coding protein_coding MGP_CBAJ_T0051605.1 MGP_CBAJ_G0024908.1 mouse_genomes_project 19 49185241 49192269 - MGP_CBAJ_P0051605 Ldb1 protein_coding protein_coding MGP_CBAJ_T0051606.1 MGP_CBAJ_G0024908.1 mouse_genomes_project 19 49185263 49198511 - MGP_CBAJ_P0051606 Ldb1 protein_coding protein_coding MGP_CBAJ_T0051607.1 MGP_CBAJ_G0024908.1 mouse_genomes_project 19 49185336 49198510 - MGP_CBAJ_P0051607 Ldb1 protein_coding protein_coding MGP_CBAJ_T0051608.1 MGP_CBAJ_G0024908.1 mouse_genomes_project 19 49185336 49198214 - MGP_CBAJ_P0051608 Ldb1 protein_coding protein_coding MGP_CBAJ_T0051609.1 MGP_CBAJ_G0024908.1 mouse_genomes_project 19 49186392 49187526 - Ldb1 protein_coding retained_intron MGP_CBAJ_T0051610.1 MGP_CBAJ_G0024908.1 mouse_genomes_project 19 49186616 49198154 - MGP_CBAJ_P0051610 Ldb1 protein_coding protein_coding MGP_CBAJ_T0051611.1 MGP_CBAJ_G0024908.1 mouse_genomes_project 19 49186698 49188648 - Ldb1 protein_coding retained_intron MGP_CBAJ_T0050134.1 MGP_CBAJ_G0024393.1 mouse_genomes_project 19 2114745 2121007 + MGP_CBAJ_P0050134 Rin1 protein_coding protein_coding MGP_CBAJ_T0050135.1 MGP_CBAJ_G0024393.1 mouse_genomes_project 19 2114796 2121016 + MGP_CBAJ_P0050135 Rin1 protein_coding unknown_likely_coding MGP_CBAJ_T0050575.1 MGP_CBAJ_G0024514.1 mouse_genomes_project 19 6248228 6268660 + MGP_CBAJ_P0050575 Stx5a protein_coding nonsense_mediated_decay MGP_CBAJ_T0050576.1 MGP_CBAJ_G0024514.1 mouse_genomes_project 19 6248228 6269144 + MGP_CBAJ_P0050576 Stx5a protein_coding protein_coding MGP_CBAJ_T0050577.1 MGP_CBAJ_G0024514.1 mouse_genomes_project 19 6248285 6249486 + Stx5a protein_coding retained_intron MGP_CBAJ_T0050578.1 MGP_CBAJ_G0024514.1 mouse_genomes_project 19 6248294 6268197 + MGP_CBAJ_P0050578 Stx5a protein_coding protein_coding MGP_CBAJ_T0050579.1 MGP_CBAJ_G0024514.1 mouse_genomes_project 19 6248303 6268676 + MGP_CBAJ_P0050579 Stx5a protein_coding nonsense_mediated_decay MGP_CBAJ_T0050580.1 MGP_CBAJ_G0024514.1 mouse_genomes_project 19 6248304 6268716 + MGP_CBAJ_P0050580 Stx5a protein_coding protein_coding MGP_CBAJ_T0050581.1 MGP_CBAJ_G0024514.1 mouse_genomes_project 19 6248327 6251350 + Stx5a protein_coding retained_intron MGP_CBAJ_T0050582.1 MGP_CBAJ_G0024514.1 mouse_genomes_project 19 6248484 6249676 + MGP_CBAJ_P0050582 Stx5a protein_coding protein_coding MGP_CBAJ_T0050583.1 MGP_CBAJ_G0024514.1 mouse_genomes_project 19 6248618 6268716 + MGP_CBAJ_P0050583 Stx5a protein_coding protein_coding MGP_CBAJ_T0050584.1 MGP_CBAJ_G0024514.1 mouse_genomes_project 19 6248622 6259990 + MGP_CBAJ_P0050584 Stx5a protein_coding protein_coding MGP_CBAJ_T0050585.1 MGP_CBAJ_G0024514.1 mouse_genomes_project 19 6248703 6268716 + MGP_CBAJ_P0050585 Stx5a protein_coding nonsense_mediated_decay MGP_CBAJ_T0050586.1 MGP_CBAJ_G0024514.1 mouse_genomes_project 19 6248959 6259112 + Stx5a protein_coding retained_intron MGP_CBAJ_T0050587.1 MGP_CBAJ_G0024514.1 mouse_genomes_project 19 6249675 6259343 + Stx5a protein_coding retained_intron MGP_CBAJ_T0050588.1 MGP_CBAJ_G0024514.1 mouse_genomes_project 19 6258627 6268142 + MGP_CBAJ_P0050588 Stx5a protein_coding protein_coding MGP_CBAJ_T0050589.1 MGP_CBAJ_G0024514.1 mouse_genomes_project 19 6258726 6268132 + Stx5a protein_coding retained_intron MGP_CBAJ_T0050590.1 MGP_CBAJ_G0024514.1 mouse_genomes_project 19 6258741 6259931 + Stx5a protein_coding retained_intron MGP_CBAJ_T0050591.1 MGP_CBAJ_G0024514.1 mouse_genomes_project 19 6258756 6268058 + Stx5a protein_coding retained_intron MGP_CBAJ_T0050592.1 MGP_CBAJ_G0024514.1 mouse_genomes_project 19 6258813 6259602 + Stx5a protein_coding retained_intron MGP_CBAJ_T0050132.1 MGP_CBAJ_G0024391.1 mouse_genomes_project 19 2102787 2105095 + MGP_CBAJ_P0050132 B4gat1 protein_coding protein_coding MGP_CBAJ_T0100330.1 MGP_CBAJ_G0038585.1 mouse_genomes_project 19 45220889 45221015 - Gm25216 snoRNA snoRNA MGP_CBAJ_T0050556.1 MGP_CBAJ_G0024507.1 mouse_genomes_project 19 5462920 5680855 - MGP_CBAJ_P0050556 protein_coding protein_coding MGP_CBAJ_T0050557.1 MGP_CBAJ_G0024507.1 mouse_genomes_project 19 5462920 5728776 - MGP_CBAJ_P0050557 protein_coding protein_coding MGP_CBAJ_T0049988.1 MGP_CBAJ_G0024349.1 mouse_genomes_project 19 1008616 1012715 + MGP_CBAJ_P0049988 Cabp2 protein_coding protein_coding MGP_CBAJ_T0049989.1 MGP_CBAJ_G0024349.1 mouse_genomes_project 19 1009526 1014375 + MGP_CBAJ_P0049989 Cabp2 protein_coding protein_coding MGP_CBAJ_T0049990.1 MGP_CBAJ_G0024349.1 mouse_genomes_project 19 1010528 1014379 + MGP_CBAJ_P0049990 Cabp2 protein_coding protein_coding MGP_CBAJ_T0049991.1 MGP_CBAJ_G0024349.1 mouse_genomes_project 19 1010557 1014379 + MGP_CBAJ_P0049991 Cabp2 protein_coding protein_coding MGP_CBAJ_T0049992.1 MGP_CBAJ_G0024349.1 mouse_genomes_project 19 1013513 1014376 + Cabp2 protein_coding processed_transcript MGP_CBAJ_T0010167.1 MGP_CBAJ_G0008305.1 mouse_genomes_project 19 4140875 4140966 - Mir6990 miRNA miRNA MGP_CBAJ_T0050696.1 MGP_CBAJ_G0024549.1 mouse_genomes_project 19 7926274 7960350 - MGP_CBAJ_P0050696 Myrf protein_coding protein_coding MGP_CBAJ_T0050697.1 MGP_CBAJ_G0024549.1 mouse_genomes_project 19 7927297 7960350 - Myrf protein_coding retained_intron MGP_CBAJ_T0050698.1 MGP_CBAJ_G0024549.1 mouse_genomes_project 19 7927696 7960347 - MGP_CBAJ_P0050698 Myrf protein_coding protein_coding MGP_CBAJ_T0050699.1 MGP_CBAJ_G0024549.1 mouse_genomes_project 19 7928292 7937145 - MGP_CBAJ_P0050699 Myrf protein_coding protein_coding MGP_CBAJ_T0050700.1 MGP_CBAJ_G0024549.1 mouse_genomes_project 19 7928377 7960206 - MGP_CBAJ_P0050700 Myrf protein_coding protein_coding MGP_CBAJ_T0050701.1 MGP_CBAJ_G0024549.1 mouse_genomes_project 19 7945622 7960350 - Myrf protein_coding retained_intron MGP_CBAJ_T0050712.1 MGP_CBAJ_G0024555.1 mouse_genomes_project 19 8271937 8296774 + MGP_CBAJ_P0050712 Cpsf7 protein_coding protein_coding MGP_CBAJ_T0049963.1 MGP_CBAJ_G0024341.1 mouse_genomes_project 19 891597 898287 + MGP_CBAJ_P0049963 Acy3 protein_coding protein_coding MGP_CBAJ_T0049964.1 MGP_CBAJ_G0024341.1 mouse_genomes_project 19 892006 894805 + MGP_CBAJ_P0049964 Acy3 protein_coding unknown_likely_coding MGP_CBAJ_T0050899.1 MGP_CBAJ_G0024645.1 mouse_genomes_project 19 11567353 11568279 - MGP_CBAJ_P0050899 Olfr1465 protein_coding protein_coding MGP_CBAJ_T0051812.1 MGP_CBAJ_G0024973.1 mouse_genomes_project 19 60897969 60978006 - MGP_CBAJ_P0051812 Nrap protein_coding protein_coding MGP_CBAJ_T0051813.1 MGP_CBAJ_G0024973.1 mouse_genomes_project 19 60897975 60978032 - MGP_CBAJ_P0051813 Nrap protein_coding protein_coding MGP_CBAJ_T0051814.1 MGP_CBAJ_G0024973.1 mouse_genomes_project 19 60898035 60978030 - MGP_CBAJ_P0051814 Nrap protein_coding protein_coding MGP_CBAJ_T0051815.1 MGP_CBAJ_G0024973.1 mouse_genomes_project 19 60898125 60964348 - MGP_CBAJ_P0051815 Nrap protein_coding nonsense_mediated_decay MGP_CBAJ_T0051816.1 MGP_CBAJ_G0024973.1 mouse_genomes_project 19 60898128 60977872 - MGP_CBAJ_P0051816 Nrap protein_coding protein_coding MGP_CBAJ_T0051817.1 MGP_CBAJ_G0024973.1 mouse_genomes_project 19 60898128 60977872 - MGP_CBAJ_P0051817 Nrap protein_coding protein_coding MGP_CBAJ_T0100336.1 MGP_CBAJ_G0038591.1 mouse_genomes_project 19 65892883 65893002 - Gm26158 snoRNA snoRNA MGP_CBAJ_T0050483.1 MGP_CBAJ_G0024482.1 mouse_genomes_project 19 4213622 4215916 + MGP_CBAJ_P0050483 Ppp1r14b protein_coding protein_coding MGP_CBAJ_T0013193.1 MGP_CBAJ_G0011305.1 mouse_genomes_project 19 5021586 5022702 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0050887.1 MGP_CBAJ_G0024633.1 mouse_genomes_project 19 11089061 11090006 - MGP_CBAJ_P0050887 Olfr1448 protein_coding protein_coding MGP_CBAJ_T0013208.1 MGP_CBAJ_G0011320.1 mouse_genomes_project 19 28257986 28258429 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0098299.1 MGP_CBAJ_G0036566.1 mouse_genomes_project 19 34839582 35005187 - sense_intronic sense_intronic MGP_CBAJ_T0050087.1 MGP_CBAJ_G0024372.1 mouse_genomes_project 19 1618386 1622269 - MGP_CBAJ_P0050087 Lrfn4 protein_coding protein_coding MGP_CBAJ_T0050088.1 MGP_CBAJ_G0024372.1 mouse_genomes_project 19 1618393 1622104 - MGP_CBAJ_P0050088 Lrfn4 protein_coding protein_coding MGP_CBAJ_T0051002.1 MGP_CBAJ_G0024696.1 mouse_genomes_project 19 22960297 23046923 - MGP_CBAJ_P0051002 Smc5 protein_coding protein_coding MGP_CBAJ_T0051003.1 MGP_CBAJ_G0024696.1 mouse_genomes_project 19 22962679 22969549 - MGP_CBAJ_P0051003 Smc5 protein_coding unknown_likely_coding MGP_CBAJ_T0006965.1 MGP_CBAJ_G0005716.1 mouse_genomes_project 19 8843604 8847086 - lincRNA lincRNA MGP_CBAJ_T0051912.1 MGP_CBAJ_G0025006.1 mouse_genomes_project 19 65878470 65912238 - MGP_CBAJ_P0051912 Eif3a protein_coding protein_coding MGP_CBAJ_T0050572.1 MGP_CBAJ_G0024512.1 mouse_genomes_project 19 6242860 6247438 + MGP_CBAJ_P0050572 protein_coding protein_coding MGP_CBAJ_T0050346.1 MGP_CBAJ_G0024461.1 mouse_genomes_project 19 3495855 3503963 - MGP_CBAJ_P0050346 Ppp2r5b protein_coding protein_coding MGP_CBAJ_T0050347.1 MGP_CBAJ_G0024461.1 mouse_genomes_project 19 3497375 3498570 - Ppp2r5b protein_coding retained_intron MGP_CBAJ_T0050348.1 MGP_CBAJ_G0024461.1 mouse_genomes_project 19 3502027 3503934 - Ppp2r5b protein_coding processed_transcript MGP_CBAJ_T0050801.1 MGP_CBAJ_G0024588.1 mouse_genomes_project 19 9319857 9395603 + MGP_CBAJ_P0050801 Gm8369 protein_coding protein_coding MGP_CBAJ_T0050807.1 MGP_CBAJ_G0024588.1 mouse_genomes_project 19 9364841 9389505 + Gm8369 protein_coding processed_transcript MGP_CBAJ_T0050808.1 MGP_CBAJ_G0024588.1 mouse_genomes_project 19 9364943 9366080 + Gm8369 protein_coding processed_transcript MGP_CBAJ_T0050809.1 MGP_CBAJ_G0024588.1 mouse_genomes_project 19 9365012 9365969 + Gm8369 protein_coding retained_intron MGP_CBAJ_T0050810.1 MGP_CBAJ_G0024588.1 mouse_genomes_project 19 9375379 9394734 + MGP_CBAJ_P0050810 Gm8369 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050811.1 MGP_CBAJ_G0024588.1 mouse_genomes_project 19 9375379 9395603 + MGP_CBAJ_P0050811 Gm8369 protein_coding protein_coding MGP_CBAJ_T0050812.1 MGP_CBAJ_G0024588.1 mouse_genomes_project 19 9375391 9391339 + Gm8369 protein_coding retained_intron MGP_CBAJ_T0011357.1 MGP_CBAJ_G0009495.1 mouse_genomes_project 19 44153149 44153387 + Gm22601 misc_RNA misc_RNA MGP_CBAJ_T0049973.1 MGP_CBAJ_G0024345.1 mouse_genomes_project 19 915800 916316 - Ndufv1 protein_coding retained_intron MGP_CBAJ_T0049974.1 MGP_CBAJ_G0024345.1 mouse_genomes_project 19 915801 920920 - MGP_CBAJ_P0049974 Ndufv1 protein_coding protein_coding MGP_CBAJ_T0049975.1 MGP_CBAJ_G0024345.1 mouse_genomes_project 19 915859 920971 - MGP_CBAJ_P0049975 Ndufv1 protein_coding protein_coding MGP_CBAJ_T0049976.1 MGP_CBAJ_G0024345.1 mouse_genomes_project 19 916592 918145 - Ndufv1 protein_coding retained_intron MGP_CBAJ_T0049977.1 MGP_CBAJ_G0024345.1 mouse_genomes_project 19 916662 917438 - Ndufv1 protein_coding retained_intron MGP_CBAJ_T0049978.1 MGP_CBAJ_G0024345.1 mouse_genomes_project 19 917050 921002 - Ndufv1 protein_coding retained_intron MGP_CBAJ_T0049979.1 MGP_CBAJ_G0024345.1 mouse_genomes_project 19 917664 921006 - MGP_CBAJ_P0049979 Ndufv1 protein_coding protein_coding MGP_CBAJ_T0049980.1 MGP_CBAJ_G0024345.1 mouse_genomes_project 19 917715 920963 - MGP_CBAJ_P0049980 Ndufv1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049981.1 MGP_CBAJ_G0024345.1 mouse_genomes_project 19 917759 921057 - MGP_CBAJ_P0049981 Ndufv1 protein_coding protein_coding MGP_CBAJ_T0049982.1 MGP_CBAJ_G0024345.1 mouse_genomes_project 19 918298 920959 - Ndufv1 protein_coding retained_intron MGP_CBAJ_T0006983.1 MGP_CBAJ_G0005728.1 mouse_genomes_project 19 33360982 33362950 + 2700046G09Rik lincRNA lincRNA MGP_CBAJ_T0101765.1 MGP_CBAJ_G0039796.1 mouse_genomes_project 19 6905190 6921534 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0050540.1 MGP_CBAJ_G0024501.1 mouse_genomes_project 19 4869529 4901092 + MGP_CBAJ_P0050540 Pla2g16 protein_coding protein_coding MGP_CBAJ_T0050541.1 MGP_CBAJ_G0024501.1 mouse_genomes_project 19 4869529 4894375 + MGP_CBAJ_P0050541 Pla2g16 protein_coding protein_coding MGP_CBAJ_T0050542.1 MGP_CBAJ_G0024501.1 mouse_genomes_project 19 4869547 4891804 + MGP_CBAJ_P0050542 Pla2g16 protein_coding protein_coding MGP_CBAJ_T0050543.1 MGP_CBAJ_G0024501.1 mouse_genomes_project 19 4869555 4899258 + MGP_CBAJ_P0050543 Pla2g16 protein_coding protein_coding MGP_CBAJ_T0050908.1 MGP_CBAJ_G0024654.1 mouse_genomes_project 19 11957699 11960830 + MGP_CBAJ_P0050908 protein_coding protein_coding MGP_CBAJ_T0050309.1 MGP_CBAJ_G0024450.1 mouse_genomes_project 19 3317760 3323050 - MGP_CBAJ_P0050309 Gm28374 protein_coding protein_coding MGP_CBAJ_T0050310.1 MGP_CBAJ_G0024451.1 mouse_genomes_project 19 3320830 3321583 + MGP_CBAJ_P0050310 Tmem262 protein_coding protein_coding MGP_CBAJ_T0050311.1 MGP_CBAJ_G0024451.1 mouse_genomes_project 19 3320830 3321586 + MGP_CBAJ_P0050311 Tmem262 protein_coding protein_coding MGP_CBAJ_T0050891.1 MGP_CBAJ_G0024637.1 mouse_genomes_project 19 11212761 11213685 - MGP_CBAJ_P0050891 Olfr1453 protein_coding protein_coding MGP_CBAJ_T0011348.1 MGP_CBAJ_G0009486.1 mouse_genomes_project 19 15917764 15918171 - Gm27970 misc_RNA misc_RNA MGP_CBAJ_T0051049.1 MGP_CBAJ_G0024716.1 mouse_genomes_project 19 27173617 27176323 + MGP_CBAJ_P0051049 Gm815 protein_coding protein_coding MGP_CBAJ_T0051923.1 MGP_CBAJ_G0025009.1 mouse_genomes_project 19 65995173 66006094 - MGP_CBAJ_P0051923 Prdx3 protein_coding protein_coding MGP_CBAJ_T0100308.1 MGP_CBAJ_G0038563.1 mouse_genomes_project 19 6225313 6225385 + Gm25855 snoRNA snoRNA MGP_CBAJ_T0098005.1 MGP_CBAJ_G0036278.1 mouse_genomes_project 19 4547960 4548081 + Gm23997 rRNA rRNA MGP_CBAJ_T0051781.1 MGP_CBAJ_G0024969.1 mouse_genomes_project 19 59737415 59755215 - MGP_CBAJ_P0051781 Zdhhc6 protein_coding protein_coding MGP_CBAJ_T0100335.1 MGP_CBAJ_G0038590.1 mouse_genomes_project 19 65891697 65891829 - Snora19 snoRNA snoRNA MGP_CBAJ_T0051889.1 MGP_CBAJ_G0024993.1 mouse_genomes_project 19 63682950 63758117 - MGP_CBAJ_P0051889 Hspa12a protein_coding protein_coding MGP_CBAJ_T0051753.1 MGP_CBAJ_G0024955.1 mouse_genomes_project 19 57424457 57513324 + MGP_CBAJ_P0051753 Mxi1 protein_coding protein_coding MGP_CBAJ_T0051754.1 MGP_CBAJ_G0024955.1 mouse_genomes_project 19 57459650 57510816 + MGP_CBAJ_P0051754 Mxi1 protein_coding protein_coding MGP_CBAJ_T0050145.1 MGP_CBAJ_G0024399.1 mouse_genomes_project 19 2175023 2187015 - MGP_CBAJ_P0050145 Klc2 protein_coding protein_coding MGP_CBAJ_T0050146.1 MGP_CBAJ_G0024399.1 mouse_genomes_project 19 2175023 2186755 - MGP_CBAJ_P0050146 Klc2 protein_coding protein_coding MGP_CBAJ_T0050147.1 MGP_CBAJ_G0024399.1 mouse_genomes_project 19 2175023 2186752 - MGP_CBAJ_P0050147 Klc2 protein_coding protein_coding MGP_CBAJ_T0050148.1 MGP_CBAJ_G0024399.1 mouse_genomes_project 19 2175025 2186753 - MGP_CBAJ_P0050148 Klc2 protein_coding protein_coding MGP_CBAJ_T0050149.1 MGP_CBAJ_G0024399.1 mouse_genomes_project 19 2176623 2177935 - Klc2 protein_coding retained_intron MGP_CBAJ_T0050150.1 MGP_CBAJ_G0024399.1 mouse_genomes_project 19 2177881 2179900 - Klc2 protein_coding retained_intron MGP_CBAJ_T0050151.1 MGP_CBAJ_G0024399.1 mouse_genomes_project 19 2178821 2180439 - Klc2 protein_coding retained_intron MGP_CBAJ_T0050152.1 MGP_CBAJ_G0024399.1 mouse_genomes_project 19 2181964 2182465 - Klc2 protein_coding retained_intron MGP_CBAJ_T0050153.1 MGP_CBAJ_G0024399.1 mouse_genomes_project 19 2182264 2186041 - MGP_CBAJ_P0050153 Klc2 protein_coding protein_coding MGP_CBAJ_T0050727.1 MGP_CBAJ_G0024564.1 mouse_genomes_project 19 8479265 8500003 - MGP_CBAJ_P0050727 Cd5 protein_coding protein_coding MGP_CBAJ_T0050709.1 MGP_CBAJ_G0024552.1 mouse_genomes_project 19 8187169 8189245 - MGP_CBAJ_P0050709 Lrrc10b protein_coding protein_coding MGP_CBAJ_T0011344.1 MGP_CBAJ_G0009482.1 mouse_genomes_project 19 3046756 3046908 - Gm27533 misc_RNA misc_RNA MGP_CBAJ_T0050992.1 MGP_CBAJ_G0024692.1 mouse_genomes_project 19 21200796 21242126 + MGP_CBAJ_P0050992 Abhd17b protein_coding protein_coding MGP_CBAJ_T0050855.1 MGP_CBAJ_G0024616.1 mouse_genomes_project 19 10510844 10511932 + MGP_CBAJ_P0050855 Olfr1441 protein_coding protein_coding MGP_CBAJ_T0051495.1 MGP_CBAJ_G0024871.1 mouse_genomes_project 19 46666156 46700615 - MGP_CBAJ_P0051495 Cpn1 protein_coding protein_coding MGP_CBAJ_T0051496.1 MGP_CBAJ_G0024871.1 mouse_genomes_project 19 46673274 46682218 - Cpn1 protein_coding retained_intron MGP_CBAJ_T0100323.1 MGP_CBAJ_G0038578.1 mouse_genomes_project 19 23479932 23480034 + Gm22144 snoRNA snoRNA MGP_CBAJ_T0051678.1 MGP_CBAJ_G0024928.1 mouse_genomes_project 19 50056655 50182205 + MGP_CBAJ_P0051678 Cnnm2 protein_coding protein_coding MGP_CBAJ_T0051679.1 MGP_CBAJ_G0024928.1 mouse_genomes_project 19 50056655 50182205 + MGP_CBAJ_P0051679 Cnnm2 protein_coding protein_coding MGP_CBAJ_T0050358.1 MGP_CBAJ_G0024464.1 mouse_genomes_project 19 3580429 3599571 + MGP_CBAJ_P0050358 Cdc42bpg protein_coding protein_coding MGP_CBAJ_T0050359.1 MGP_CBAJ_G0024464.1 mouse_genomes_project 19 3595726 3596151 + Cdc42bpg protein_coding retained_intron MGP_CBAJ_T0050206.1 MGP_CBAJ_G0024420.1 mouse_genomes_project 19 2645329 2646350 - MGP_CBAJ_P0050206 1700020D05Rik protein_coding protein_coding MGP_CBAJ_T0100324.1 MGP_CBAJ_G0038579.1 mouse_genomes_project 19 24903034 24903166 - Gm23658 snoRNA snoRNA MGP_CBAJ_T0050993.1 MGP_CBAJ_G0024693.1 mouse_genomes_project 19 21341054 21420446 + MGP_CBAJ_P0050993 Tmem2 protein_coding protein_coding MGP_CBAJ_T0050994.1 MGP_CBAJ_G0024693.1 mouse_genomes_project 19 21341054 21420446 + MGP_CBAJ_P0050994 Tmem2 protein_coding protein_coding MGP_CBAJ_T0010203.1 MGP_CBAJ_G0008341.1 mouse_genomes_project 19 62851623 62851693 + Mir5623 miRNA miRNA MGP_CBAJ_T0010206.1 MGP_CBAJ_G0008344.1 mouse_genomes_project 19 65891696 65891765 - Mir3084-2 miRNA miRNA MGP_CBAJ_T0050553.1 MGP_CBAJ_G0024505.1 mouse_genomes_project 19 5119490 5143197 - MGP_CBAJ_P0050553 Slc22a26 protein_coding protein_coding MGP_CBAJ_T0050554.1 MGP_CBAJ_G0024505.1 mouse_genomes_project 19 5120429 5143286 - MGP_CBAJ_P0050554 Slc22a26 protein_coding protein_coding MGP_CBAJ_T0050129.1 MGP_CBAJ_G0024388.1 mouse_genomes_project 19 2015554 2020210 + MGP_CBAJ_P0050129 Mrpl11 protein_coding protein_coding MGP_CBAJ_T0050776.1 MGP_CBAJ_G0024579.1 mouse_genomes_project 19 8995491 9025904 - MGP_CBAJ_P0050776 Ms4a13 protein_coding protein_coding MGP_CBAJ_T0050777.1 MGP_CBAJ_G0024579.1 mouse_genomes_project 19 8995492 9025918 - MGP_CBAJ_P0050777 Ms4a13 protein_coding protein_coding MGP_CBAJ_T0003805.1 MGP_CBAJ_G0003404.1 mouse_genomes_project 19 64209415 64211434 - Gm29261 antisense antisense MGP_CBAJ_T0010199.1 MGP_CBAJ_G0008337.1 mouse_genomes_project 19 53421936 53422015 - Gm27935 miRNA miRNA MGP_CBAJ_T0050239.1 MGP_CBAJ_G0024432.1 mouse_genomes_project 19 2912212 2915838 - MGP_CBAJ_P0050239 Sssca1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050240.1 MGP_CBAJ_G0024432.1 mouse_genomes_project 19 2914427 2915846 - MGP_CBAJ_P0050240 Sssca1 protein_coding protein_coding MGP_CBAJ_T0050241.1 MGP_CBAJ_G0024432.1 mouse_genomes_project 19 2914431 2915785 - Sssca1 protein_coding retained_intron MGP_CBAJ_T0050242.1 MGP_CBAJ_G0024432.1 mouse_genomes_project 19 2914431 2915857 - MGP_CBAJ_P0050242 Sssca1 protein_coding protein_coding MGP_CBAJ_T0050243.1 MGP_CBAJ_G0024432.1 mouse_genomes_project 19 2914535 2915600 - MGP_CBAJ_P0050243 Sssca1 protein_coding protein_coding MGP_CBAJ_T0050244.1 MGP_CBAJ_G0024432.1 mouse_genomes_project 19 2915016 2915824 - Sssca1 protein_coding retained_intron MGP_CBAJ_T0051148.1 MGP_CBAJ_G0024745.1 mouse_genomes_project 19 31340214 32662780 - MGP_CBAJ_P0051148 Prkg1 protein_coding protein_coding MGP_CBAJ_T0051149.1 MGP_CBAJ_G0024745.1 mouse_genomes_project 19 31341210 32556551 - MGP_CBAJ_P0051149 Prkg1 protein_coding protein_coding MGP_CBAJ_T0051150.1 MGP_CBAJ_G0024745.1 mouse_genomes_project 19 31341624 31346637 - Prkg1 protein_coding processed_transcript MGP_CBAJ_T0051151.1 MGP_CBAJ_G0024745.1 mouse_genomes_project 19 31341626 31346637 - Prkg1 protein_coding processed_transcript MGP_CBAJ_T0051152.1 MGP_CBAJ_G0024745.1 mouse_genomes_project 19 31397873 31403994 - Prkg1 protein_coding processed_transcript MGP_CBAJ_T0051153.1 MGP_CBAJ_G0024745.1 mouse_genomes_project 19 31495723 31573526 - Prkg1 protein_coding retained_intron MGP_CBAJ_T0051155.1 MGP_CBAJ_G0024745.1 mouse_genomes_project 19 32637667 32662720 - MGP_CBAJ_P0051155 Prkg1 protein_coding protein_coding MGP_CBAJ_T0049993.1 MGP_CBAJ_G0024350.1 mouse_genomes_project 19 1026399 1028018 + Cdk2ap2 protein_coding retained_intron MGP_CBAJ_T0049994.1 MGP_CBAJ_G0024350.1 mouse_genomes_project 19 1026399 1027464 + MGP_CBAJ_P0049994 Cdk2ap2 protein_coding protein_coding MGP_CBAJ_T0049995.1 MGP_CBAJ_G0024350.1 mouse_genomes_project 19 1026400 1028009 + MGP_CBAJ_P0049995 Cdk2ap2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049996.1 MGP_CBAJ_G0024350.1 mouse_genomes_project 19 1026424 1028016 + MGP_CBAJ_P0049996 Cdk2ap2 protein_coding protein_coding MGP_CBAJ_T0050975.1 MGP_CBAJ_G0024687.1 mouse_genomes_project 19 20214644 20407273 - MGP_CBAJ_P0050975 Tmc1 protein_coding protein_coding MGP_CBAJ_T0011343.1 MGP_CBAJ_G0009481.1 mouse_genomes_project 19 3000683 3000769 - Gm27694 misc_RNA misc_RNA MGP_CBAJ_T0050710.1 MGP_CBAJ_G0024553.1 mouse_genomes_project 19 8213897 8222011 - MGP_CBAJ_P0050710 Ppp1r32 protein_coding unknown_likely_coding MGP_CBAJ_T0010162.1 MGP_CBAJ_G0008300.1 mouse_genomes_project 19 3536871 3536957 + Mir194-2 miRNA miRNA MGP_CBAJ_T0013189.1 MGP_CBAJ_G0011301.1 mouse_genomes_project 19 293 1592 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0051373.1 MGP_CBAJ_G0024827.1 mouse_genomes_project 19 43227081 43250253 + MGP_CBAJ_P0051373 Zfp518a protein_coding protein_coding MGP_CBAJ_T0050795.1 MGP_CBAJ_G0024586.1 mouse_genomes_project 19 9255661 9274171 + MGP_CBAJ_P0050795 Ms4a4c protein_coding protein_coding MGP_CBAJ_T0050796.1 MGP_CBAJ_G0024586.1 mouse_genomes_project 19 9258552 9285247 + MGP_CBAJ_P0050796 Ms4a4c protein_coding protein_coding MGP_CBAJ_T0050797.1 MGP_CBAJ_G0024586.1 mouse_genomes_project 19 9267825 9284469 + MGP_CBAJ_P0050797 Ms4a4c protein_coding protein_coding MGP_CBAJ_T0050550.1 MGP_CBAJ_G0024504.1 mouse_genomes_project 19 4996935 5036471 - MGP_CBAJ_P0050550 Slc22a19 protein_coding protein_coding MGP_CBAJ_T0050551.1 MGP_CBAJ_G0024504.1 mouse_genomes_project 19 5002216 5036440 - Slc22a19 protein_coding retained_intron MGP_CBAJ_T0050552.1 MGP_CBAJ_G0024504.1 mouse_genomes_project 19 5031845 5036471 - Slc22a19 protein_coding retained_intron MGP_CBAJ_T0010202.1 MGP_CBAJ_G0008340.1 mouse_genomes_project 19 59617488 59617545 + Mir6715 miRNA miRNA MGP_CBAJ_T0051397.1 MGP_CBAJ_G0024839.1 mouse_genomes_project 19 44271437 44273592 - MGP_CBAJ_P0051397 Frat2 protein_coding protein_coding MGP_CBAJ_T0010187.1 MGP_CBAJ_G0008325.1 mouse_genomes_project 19 41062855 41062919 - Gm23800 miRNA miRNA MGP_CBAJ_T0010189.1 MGP_CBAJ_G0008327.1 mouse_genomes_project 19 43978937 43979076 + Mir8091 miRNA miRNA MGP_CBAJ_T0013204.1 MGP_CBAJ_G0011316.1 mouse_genomes_project 19 19994907 19995591 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0050165.1 MGP_CBAJ_G0024410.1 mouse_genomes_project 19 2549358 2551272 - MGP_CBAJ_P0050165 Drap1 protein_coding protein_coding MGP_CBAJ_T0050166.1 MGP_CBAJ_G0024410.1 mouse_genomes_project 19 2549361 2550481 - Drap1 protein_coding retained_intron MGP_CBAJ_T0050167.1 MGP_CBAJ_G0024410.1 mouse_genomes_project 19 2549365 2550778 - Drap1 protein_coding retained_intron MGP_CBAJ_T0050168.1 MGP_CBAJ_G0024410.1 mouse_genomes_project 19 2549384 2551345 - Drap1 protein_coding retained_intron MGP_CBAJ_T0050169.1 MGP_CBAJ_G0024410.1 mouse_genomes_project 19 2549384 2551479 - MGP_CBAJ_P0050169 Drap1 protein_coding protein_coding MGP_CBAJ_T0050170.1 MGP_CBAJ_G0024410.1 mouse_genomes_project 19 2549418 2550639 - Drap1 protein_coding retained_intron MGP_CBAJ_T0050171.1 MGP_CBAJ_G0024410.1 mouse_genomes_project 19 2550164 2551337 - Drap1 protein_coding retained_intron MGP_CBAJ_T0051197.1 MGP_CBAJ_G0024764.1 mouse_genomes_project 19 35457560 35507463 + MGP_CBAJ_P0051197 protein_coding unknown_likely_coding MGP_CBAJ_T0051198.1 MGP_CBAJ_G0024764.1 mouse_genomes_project 19 35457821 35498570 + MGP_CBAJ_P0051198 protein_coding protein_coding MGP_CBAJ_T0051199.1 MGP_CBAJ_G0024764.1 mouse_genomes_project 19 35484582 35502990 + protein_coding retained_intron MGP_CBAJ_T0051200.1 MGP_CBAJ_G0024764.1 mouse_genomes_project 19 35499833 35501427 + protein_coding processed_transcript MGP_CBAJ_T0051734.1 MGP_CBAJ_G0024951.1 mouse_genomes_project 19 53893913 54468526 - MGP_CBAJ_P0051734 protein_coding protein_coding MGP_CBAJ_T0051735.1 MGP_CBAJ_G0024951.1 mouse_genomes_project 19 53898272 54468526 - MGP_CBAJ_P0051735 protein_coding protein_coding MGP_CBAJ_T0051736.1 MGP_CBAJ_G0024951.1 mouse_genomes_project 19 53901610 54002575 - MGP_CBAJ_P0051736 protein_coding protein_coding MGP_CBAJ_T0051737.1 MGP_CBAJ_G0024951.1 mouse_genomes_project 19 53903304 54468365 - MGP_CBAJ_P0051737 protein_coding protein_coding MGP_CBAJ_T0003798.1 MGP_CBAJ_G0003397.1 mouse_genomes_project 19 48122823 48137182 - antisense antisense MGP_CBAJ_T0007002.1 MGP_CBAJ_G0005742.1 mouse_genomes_project 19 49137917 49154292 + 4930505N22Rik lincRNA lincRNA MGP_CBAJ_T0051190.1 MGP_CBAJ_G0024761.1 mouse_genomes_project 19 35324390 35348874 + MGP_CBAJ_P0051190 Lipn protein_coding protein_coding MGP_CBAJ_T0051191.1 MGP_CBAJ_G0024761.1 mouse_genomes_project 19 35324410 35333787 + MGP_CBAJ_P0051191 Lipn protein_coding protein_coding MGP_CBAJ_T0051192.1 MGP_CBAJ_G0024761.1 mouse_genomes_project 19 35324561 35343229 + MGP_CBAJ_P0051192 Lipn protein_coding nonsense_mediated_decay MGP_CBAJ_T0051830.1 MGP_CBAJ_G0024979.1 mouse_genomes_project 19 61448165 61488190 - MGP_CBAJ_P0051830 Ccdc186 protein_coding protein_coding MGP_CBAJ_T0051831.1 MGP_CBAJ_G0024979.1 mouse_genomes_project 19 61451215 61459254 - MGP_CBAJ_P0051831 Ccdc186 protein_coding protein_coding MGP_CBAJ_T0051832.1 MGP_CBAJ_G0024979.1 mouse_genomes_project 19 61451647 61479683 - MGP_CBAJ_P0051832 Ccdc186 protein_coding protein_coding MGP_CBAJ_T0051833.1 MGP_CBAJ_G0024979.1 mouse_genomes_project 19 61453646 61463520 - Ccdc186 protein_coding retained_intron MGP_CBAJ_T0051834.1 MGP_CBAJ_G0024979.1 mouse_genomes_project 19 61463370 61466999 - Ccdc186 protein_coding retained_intron MGP_CBAJ_T0051835.1 MGP_CBAJ_G0024979.1 mouse_genomes_project 19 61466051 61488190 - Ccdc186 protein_coding retained_intron MGP_CBAJ_T0051568.1 MGP_CBAJ_G0024898.1 mouse_genomes_project 19 48394795 48583957 + MGP_CBAJ_P0051568 Btrc protein_coding protein_coding MGP_CBAJ_T0051569.1 MGP_CBAJ_G0024898.1 mouse_genomes_project 19 48394795 48583957 + MGP_CBAJ_P0051569 Btrc protein_coding protein_coding MGP_CBAJ_T0051570.1 MGP_CBAJ_G0024898.1 mouse_genomes_project 19 48394900 48582646 + MGP_CBAJ_P0051570 Btrc protein_coding unknown_likely_coding MGP_CBAJ_T0051284.1 MGP_CBAJ_G0024798.1 mouse_genomes_project 19 39982592 39991196 - MGP_CBAJ_P0051284 Rbp4 protein_coding protein_coding MGP_CBAJ_T0051285.1 MGP_CBAJ_G0024798.1 mouse_genomes_project 19 39982592 39990685 - MGP_CBAJ_P0051285 Rbp4 protein_coding protein_coding MGP_CBAJ_T0050779.1 MGP_CBAJ_G0024581.1 mouse_genomes_project 19 9070782 9089943 - MGP_CBAJ_P0050779 Ms4a1 protein_coding protein_coding MGP_CBAJ_T0050780.1 MGP_CBAJ_G0024581.1 mouse_genomes_project 19 9071984 9075792 - Ms4a1 protein_coding retained_intron MGP_CBAJ_T0050781.1 MGP_CBAJ_G0024581.1 mouse_genomes_project 19 9072772 9079929 - MGP_CBAJ_P0050781 Ms4a1 protein_coding unknown_likely_coding MGP_CBAJ_T0050782.1 MGP_CBAJ_G0024581.1 mouse_genomes_project 19 9075097 9089847 - Ms4a1 protein_coding retained_intron MGP_CBAJ_T0017442.1 MGP_CBAJ_G0015122.1 mouse_genomes_project 19 7916441 7920457 + Gm10143 processed_transcript processed_transcript MGP_CBAJ_T0017443.1 MGP_CBAJ_G0015122.1 mouse_genomes_project 19 7917260 7920455 + Gm10143 processed_transcript processed_transcript MGP_CBAJ_T0051228.1 MGP_CBAJ_G0024780.1 mouse_genomes_project 19 37687452 37696904 - MGP_CBAJ_P0051228 Ankrd1 protein_coding protein_coding MGP_CBAJ_T0050770.1 MGP_CBAJ_G0024577.1 mouse_genomes_project 19 8919648 8954615 - MGP_CBAJ_P0050770 1700017D01Rik protein_coding protein_coding MGP_CBAJ_T0050771.1 MGP_CBAJ_G0024577.1 mouse_genomes_project 19 8933725 8936172 - 1700017D01Rik protein_coding retained_intron MGP_CBAJ_T0003780.1 MGP_CBAJ_G0003385.1 mouse_genomes_project 19 4588836 4595703 + Gm17227 antisense antisense MGP_CBAJ_T0003781.1 MGP_CBAJ_G0003385.1 mouse_genomes_project 19 4588912 4595525 + Gm17227 antisense antisense MGP_CBAJ_T0051290.1 MGP_CBAJ_G0024801.1 mouse_genomes_project 19 40155476 40213699 + MGP_CBAJ_P0051290 Lgi1 protein_coding protein_coding MGP_CBAJ_T0051291.1 MGP_CBAJ_G0024801.1 mouse_genomes_project 19 40155507 40210413 + MGP_CBAJ_P0051291 Lgi1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051292.1 MGP_CBAJ_G0024801.1 mouse_genomes_project 19 40155517 40208274 + MGP_CBAJ_P0051292 Lgi1 protein_coding protein_coding MGP_CBAJ_T0051293.1 MGP_CBAJ_G0024801.1 mouse_genomes_project 19 40155586 40208273 + MGP_CBAJ_P0051293 Lgi1 protein_coding protein_coding MGP_CBAJ_T0051294.1 MGP_CBAJ_G0024801.1 mouse_genomes_project 19 40155600 40197187 + MGP_CBAJ_P0051294 Lgi1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051295.1 MGP_CBAJ_G0024801.1 mouse_genomes_project 19 40155611 40207967 + MGP_CBAJ_P0051295 Lgi1 protein_coding protein_coding MGP_CBAJ_T0051296.1 MGP_CBAJ_G0024801.1 mouse_genomes_project 19 40155707 40156848 + Lgi1 protein_coding retained_intron MGP_CBAJ_T0051297.1 MGP_CBAJ_G0024801.1 mouse_genomes_project 19 40155750 40159992 + Lgi1 protein_coding retained_intron MGP_CBAJ_T0051298.1 MGP_CBAJ_G0024801.1 mouse_genomes_project 19 40156341 40202746 + Lgi1 protein_coding retained_intron MGP_CBAJ_T0050845.1 MGP_CBAJ_G0024606.1 mouse_genomes_project 19 9990396 9991329 - MGP_CBAJ_P0050845 Olfr1423 protein_coding protein_coding MGP_CBAJ_T0050817.1 MGP_CBAJ_G0024592.1 mouse_genomes_project 19 9486019 9491961 - Ms4a6d protein_coding processed_transcript MGP_CBAJ_T0050818.1 MGP_CBAJ_G0024592.1 mouse_genomes_project 19 9486125 9497269 - MGP_CBAJ_P0050818 Ms4a6d protein_coding protein_coding MGP_CBAJ_T0050819.1 MGP_CBAJ_G0024592.1 mouse_genomes_project 19 9487003 9492055 - Ms4a6d protein_coding retained_intron MGP_CBAJ_T0051571.1 MGP_CBAJ_G0024899.1 mouse_genomes_project 19 48604713 48613999 - MGP_CBAJ_P0051571 Poll protein_coding protein_coding MGP_CBAJ_T0051652.1 MGP_CBAJ_G0024917.1 mouse_genomes_project 19 49517492 49526376 - MGP_CBAJ_P0051652 Cuedc2 protein_coding protein_coding MGP_CBAJ_T0051653.1 MGP_CBAJ_G0024917.1 mouse_genomes_project 19 49517492 49526376 - MGP_CBAJ_P0051653 Cuedc2 protein_coding protein_coding MGP_CBAJ_T0050174.1 MGP_CBAJ_G0024412.1 mouse_genomes_project 19 2581385 2590164 + MGP_CBAJ_P0050174 Fosl1 protein_coding protein_coding MGP_CBAJ_T0099072.1 MGP_CBAJ_G0037327.1 mouse_genomes_project 19 37986049 37986155 - Gm23170 snRNA snRNA MGP_CBAJ_T0050789.1 MGP_CBAJ_G0024584.1 mouse_genomes_project 19 9148667 9165261 - MGP_CBAJ_P0050789 Ms4a7 protein_coding protein_coding MGP_CBAJ_T0050790.1 MGP_CBAJ_G0024584.1 mouse_genomes_project 19 9148667 9166710 - MGP_CBAJ_P0050790 Ms4a7 protein_coding protein_coding MGP_CBAJ_T0050791.1 MGP_CBAJ_G0024584.1 mouse_genomes_project 19 9149034 9166682 - MGP_CBAJ_P0050791 Ms4a7 protein_coding protein_coding MGP_CBAJ_T0050792.1 MGP_CBAJ_G0024584.1 mouse_genomes_project 19 9149037 9153358 - MGP_CBAJ_P0050792 Ms4a7 protein_coding protein_coding MGP_CBAJ_T0050793.1 MGP_CBAJ_G0024584.1 mouse_genomes_project 19 9149133 9166712 - Ms4a7 protein_coding retained_intron MGP_CBAJ_T0049905.1 MGP_CBAJ_G0024331.1 mouse_genomes_project 19 385901 510616 - MGP_CBAJ_P0049905 protein_coding protein_coding MGP_CBAJ_T0049906.1 MGP_CBAJ_G0024331.1 mouse_genomes_project 19 385904 510621 - MGP_CBAJ_P0049906 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049907.1 MGP_CBAJ_G0024331.1 mouse_genomes_project 19 385909 425456 - MGP_CBAJ_P0049907 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049908.1 MGP_CBAJ_G0024331.1 mouse_genomes_project 19 431313 510624 - MGP_CBAJ_P0049908 protein_coding protein_coding MGP_CBAJ_T0051015.1 MGP_CBAJ_G0024706.1 mouse_genomes_project 19 24627920 24634657 + MGP_CBAJ_P0051015 Tmem252 protein_coding protein_coding MGP_CBAJ_T0051530.1 MGP_CBAJ_G0024884.1 mouse_genomes_project 19 47396551 47408275 - MGP_CBAJ_P0051530 Gm20538 protein_coding protein_coding MGP_CBAJ_T0006973.1 MGP_CBAJ_G0005723.1 mouse_genomes_project 19 23967665 23969372 + 1700021P04Rik lincRNA lincRNA MGP_CBAJ_T0050671.1 MGP_CBAJ_G0024538.1 mouse_genomes_project 19 6664673 6692530 - MGP_CBAJ_P0050671 Asrgl1 protein_coding protein_coding MGP_CBAJ_T0050672.1 MGP_CBAJ_G0024538.1 mouse_genomes_project 19 6689351 6692425 - Asrgl1 protein_coding processed_transcript MGP_CBAJ_T0010178.1 MGP_CBAJ_G0008316.1 mouse_genomes_project 19 22898078 22898199 + Mir1192 miRNA miRNA MGP_CBAJ_T0051583.1 MGP_CBAJ_G0024902.1 mouse_genomes_project 19 48825046 48831133 - MGP_CBAJ_P0051583 Fgf8 protein_coding protein_coding MGP_CBAJ_T0051584.1 MGP_CBAJ_G0024902.1 mouse_genomes_project 19 48825061 48831136 - MGP_CBAJ_P0051584 Fgf8 protein_coding protein_coding MGP_CBAJ_T0051585.1 MGP_CBAJ_G0024902.1 mouse_genomes_project 19 48825066 48831132 - MGP_CBAJ_P0051585 Fgf8 protein_coding protein_coding MGP_CBAJ_T0051586.1 MGP_CBAJ_G0024902.1 mouse_genomes_project 19 48825184 48831117 - MGP_CBAJ_P0051586 Fgf8 protein_coding protein_coding MGP_CBAJ_T0051587.1 MGP_CBAJ_G0024902.1 mouse_genomes_project 19 48825219 48830933 - MGP_CBAJ_P0051587 Fgf8 protein_coding protein_coding MGP_CBAJ_T0051588.1 MGP_CBAJ_G0024902.1 mouse_genomes_project 19 48825238 48830933 - MGP_CBAJ_P0051588 Fgf8 protein_coding protein_coding MGP_CBAJ_T0049962.1 MGP_CBAJ_G0024340.1 mouse_genomes_project 19 874685 886582 + MGP_CBAJ_P0049962 Aldh3b2 protein_coding protein_coding MGP_CBAJ_T0011354.1 MGP_CBAJ_G0009492.1 mouse_genomes_project 19 35567197 35567356 + Gm27818 misc_RNA misc_RNA MGP_CBAJ_T0051829.1 MGP_CBAJ_G0024978.1 mouse_genomes_project 19 61371103 61373591 + MGP_CBAJ_P0051829 Adrb1 protein_coding protein_coding MGP_CBAJ_T0051130.1 MGP_CBAJ_G0024739.1 mouse_genomes_project 19 30586322 30631223 + MGP_CBAJ_P0051130 Il33 protein_coding protein_coding MGP_CBAJ_T0051131.1 MGP_CBAJ_G0024739.1 mouse_genomes_project 19 30586323 30616331 + MGP_CBAJ_P0051131 Il33 protein_coding protein_coding MGP_CBAJ_T0051132.1 MGP_CBAJ_G0024739.1 mouse_genomes_project 19 30586340 30629480 + MGP_CBAJ_P0051132 Il33 protein_coding protein_coding MGP_CBAJ_T0051133.1 MGP_CBAJ_G0024739.1 mouse_genomes_project 19 30610043 30631209 + MGP_CBAJ_P0051133 Il33 protein_coding protein_coding MGP_CBAJ_T0051134.1 MGP_CBAJ_G0024739.1 mouse_genomes_project 19 30616069 30617065 + MGP_CBAJ_P0051134 Il33 protein_coding protein_coding MGP_CBAJ_T0050846.1 MGP_CBAJ_G0024607.1 mouse_genomes_project 19 10064832 10070540 - MGP_CBAJ_P0050846 Olfr1426 protein_coding protein_coding MGP_CBAJ_T0013205.1 MGP_CBAJ_G0011317.1 mouse_genomes_project 19 23517741 23518700 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0050923.1 MGP_CBAJ_G0024668.1 mouse_genomes_project 19 14573216 14596590 - MGP_CBAJ_P0050923 Psat1 protein_coding protein_coding MGP_CBAJ_T0050924.1 MGP_CBAJ_G0024668.1 mouse_genomes_project 19 14573665 14596153 - MGP_CBAJ_P0050924 Psat1 protein_coding protein_coding MGP_CBAJ_T0050925.1 MGP_CBAJ_G0024668.1 mouse_genomes_project 19 14573668 14581187 - Psat1 protein_coding retained_intron MGP_CBAJ_T0050926.1 MGP_CBAJ_G0024668.1 mouse_genomes_project 19 14586476 14624246 - MGP_CBAJ_P0050926 Psat1 protein_coding protein_coding MGP_CBAJ_T0050927.1 MGP_CBAJ_G0024668.1 mouse_genomes_project 19 14588314 14589813 - Psat1 protein_coding processed_transcript MGP_CBAJ_T0050928.1 MGP_CBAJ_G0024668.1 mouse_genomes_project 19 14589878 14592891 - Psat1 protein_coding retained_intron MGP_CBAJ_T0050929.1 MGP_CBAJ_G0024668.1 mouse_genomes_project 19 14591978 14596461 - Psat1 protein_coding retained_intron MGP_CBAJ_T0050159.1 MGP_CBAJ_G0024405.1 mouse_genomes_project 19 2463903 2468778 - MGP_CBAJ_P0050159 Cst6 protein_coding protein_coding MGP_CBAJ_T0050764.1 MGP_CBAJ_G0024574.1 mouse_genomes_project 19 8780520 8795463 - MGP_CBAJ_P0050764 Ms4a15 protein_coding protein_coding MGP_CBAJ_T0050765.1 MGP_CBAJ_G0024574.1 mouse_genomes_project 19 8785383 8795394 - MGP_CBAJ_P0050765 Ms4a15 protein_coding protein_coding MGP_CBAJ_T0050766.1 MGP_CBAJ_G0024574.1 mouse_genomes_project 19 8785469 8795443 - MGP_CBAJ_P0050766 Ms4a15 protein_coding protein_coding MGP_CBAJ_T0050813.1 MGP_CBAJ_G0024590.1 mouse_genomes_project 19 9399535 9417624 + MGP_CBAJ_P0050813 Ms4a6b protein_coding protein_coding MGP_CBAJ_T0050814.1 MGP_CBAJ_G0024590.1 mouse_genomes_project 19 9401617 9404879 + Ms4a6b protein_coding retained_intron MGP_CBAJ_T0050815.1 MGP_CBAJ_G0024590.1 mouse_genomes_project 19 9404694 9410441 + MGP_CBAJ_P0050815 Ms4a6b protein_coding nonsense_mediated_decay MGP_CBAJ_T0051377.1 MGP_CBAJ_G0024829.1 mouse_genomes_project 19 43373735 43411165 + MGP_CBAJ_P0051377 Dntt protein_coding protein_coding MGP_CBAJ_T0051378.1 MGP_CBAJ_G0024829.1 mouse_genomes_project 19 43373735 43411165 + MGP_CBAJ_P0051378 Dntt protein_coding protein_coding MGP_CBAJ_T0050836.1 MGP_CBAJ_G0024599.1 mouse_genomes_project 19 9677759 9682289 + MGP_CBAJ_P0050836 Mrpl16 protein_coding protein_coding MGP_CBAJ_T0097799.1 MGP_CBAJ_G0036072.1 mouse_genomes_project 19 44255619 44256261 + pseudogene pseudogene MGP_CBAJ_T0051733.1 MGP_CBAJ_G0024950.1 mouse_genomes_project 19 53773770 53774382 - MGP_CBAJ_P0051733 Rpl13a-ps1 protein_coding protein_coding MGP_CBAJ_T0049997.1 MGP_CBAJ_G0024351.1 mouse_genomes_project 19 1028996 1042957 + MGP_CBAJ_P0049997 Pitpnm1 protein_coding protein_coding MGP_CBAJ_T0049998.1 MGP_CBAJ_G0024351.1 mouse_genomes_project 19 1029044 1042957 + Pitpnm1 protein_coding retained_intron MGP_CBAJ_T0049999.1 MGP_CBAJ_G0024351.1 mouse_genomes_project 19 1029267 1033921 + MGP_CBAJ_P0049999 Pitpnm1 protein_coding protein_coding MGP_CBAJ_T0050000.1 MGP_CBAJ_G0024351.1 mouse_genomes_project 19 1029620 1042957 + MGP_CBAJ_P0050000 Pitpnm1 protein_coding protein_coding MGP_CBAJ_T0050001.1 MGP_CBAJ_G0024351.1 mouse_genomes_project 19 1037195 1038899 + Pitpnm1 protein_coding retained_intron MGP_CBAJ_T0050002.1 MGP_CBAJ_G0024351.1 mouse_genomes_project 19 1037743 1041209 + Pitpnm1 protein_coding processed_transcript MGP_CBAJ_T0050003.1 MGP_CBAJ_G0024351.1 mouse_genomes_project 19 1038639 1039726 + Pitpnm1 protein_coding retained_intron MGP_CBAJ_T0050004.1 MGP_CBAJ_G0024351.1 mouse_genomes_project 19 1039791 1041016 + Pitpnm1 protein_coding retained_intron MGP_CBAJ_T0050005.1 MGP_CBAJ_G0024351.1 mouse_genomes_project 19 1040152 1041363 + Pitpnm1 protein_coding retained_intron MGP_CBAJ_T0050006.1 MGP_CBAJ_G0024351.1 mouse_genomes_project 19 1040920 1042607 + Pitpnm1 protein_coding retained_intron MGP_CBAJ_T0050007.1 MGP_CBAJ_G0024351.1 mouse_genomes_project 19 1041311 1042957 + Pitpnm1 protein_coding retained_intron MGP_CBAJ_T0050692.1 MGP_CBAJ_G0024548.1 mouse_genomes_project 19 7922013 7925827 + Tmem258 protein_coding processed_transcript MGP_CBAJ_T0050693.1 MGP_CBAJ_G0024548.1 mouse_genomes_project 19 7922013 7925827 + MGP_CBAJ_P0050693 Tmem258 protein_coding protein_coding MGP_CBAJ_T0050694.1 MGP_CBAJ_G0024548.1 mouse_genomes_project 19 7922218 7925821 + Tmem258 protein_coding retained_intron MGP_CBAJ_T0050695.1 MGP_CBAJ_G0024548.1 mouse_genomes_project 19 7924033 7925827 + MGP_CBAJ_P0050695 Tmem258 protein_coding protein_coding MGP_CBAJ_T0051429.1 MGP_CBAJ_G0024849.1 mouse_genomes_project 19 44539650 44550756 - MGP_CBAJ_P0051429 Morn4 protein_coding protein_coding MGP_CBAJ_T0050937.1 MGP_CBAJ_G0024673.1 mouse_genomes_project 19 15709638 15711147 - MGP_CBAJ_P0050937 Foxb2 protein_coding protein_coding MGP_CBAJ_T0050215.1 MGP_CBAJ_G0024425.1 mouse_genomes_project 19 2809964 2820601 + MGP_CBAJ_P0050215 Rela protein_coding protein_coding MGP_CBAJ_T0051277.1 MGP_CBAJ_G0024795.1 mouse_genomes_project 19 39738203 39904048 - MGP_CBAJ_P0051277 Myof protein_coding protein_coding MGP_CBAJ_T0051278.1 MGP_CBAJ_G0024795.1 mouse_genomes_project 19 39738203 39904048 - MGP_CBAJ_P0051278 Myof protein_coding protein_coding MGP_CBAJ_T0051279.1 MGP_CBAJ_G0024795.1 mouse_genomes_project 19 39738691 39903792 - MGP_CBAJ_P0051279 Myof protein_coding unknown_likely_coding MGP_CBAJ_T0051871.1 MGP_CBAJ_G0024985.1 mouse_genomes_project 19 62189323 62231474 + MGP_CBAJ_P0051871 Trub1 protein_coding protein_coding MGP_CBAJ_T0051872.1 MGP_CBAJ_G0024985.1 mouse_genomes_project 19 62189323 62229432 + MGP_CBAJ_P0051872 Trub1 protein_coding protein_coding MGP_CBAJ_T0100318.1 MGP_CBAJ_G0038573.1 mouse_genomes_project 19 9872532 9872666 - Gm22272 snoRNA snoRNA MGP_CBAJ_T0050106.1 MGP_CBAJ_G0024379.1 mouse_genomes_project 19 1823011 1836919 - MGP_CBAJ_P0050106 Rbm14 protein_coding protein_coding MGP_CBAJ_T0050107.1 MGP_CBAJ_G0024379.1 mouse_genomes_project 19 1823364 1836870 - MGP_CBAJ_P0050107 Rbm14 protein_coding protein_coding MGP_CBAJ_T0050108.1 MGP_CBAJ_G0024379.1 mouse_genomes_project 19 1824219 1836797 - MGP_CBAJ_P0050108 Rbm14 protein_coding protein_coding MGP_CBAJ_T0050251.1 MGP_CBAJ_G0024436.1 mouse_genomes_project 19 3086136 3094086 + MGP_CBAJ_P0050251 Slc25a45 protein_coding protein_coding MGP_CBAJ_T0050252.1 MGP_CBAJ_G0024436.1 mouse_genomes_project 19 3086947 3088916 + MGP_CBAJ_P0050252 Slc25a45 protein_coding protein_coding MGP_CBAJ_T0050253.1 MGP_CBAJ_G0024436.1 mouse_genomes_project 19 3086974 3093311 + MGP_CBAJ_P0050253 Slc25a45 protein_coding protein_coding MGP_CBAJ_T0050254.1 MGP_CBAJ_G0024436.1 mouse_genomes_project 19 3086975 3092805 + MGP_CBAJ_P0050254 Slc25a45 protein_coding protein_coding MGP_CBAJ_T0050372.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3617862 3632373 + Map4k2 protein_coding retained_intron MGP_CBAJ_T0050373.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3617882 3619388 + MGP_CBAJ_P0050373 Map4k2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050374.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3617887 3632376 + MGP_CBAJ_P0050374 Map4k2 protein_coding protein_coding MGP_CBAJ_T0050375.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3617918 3618728 + Map4k2 protein_coding processed_transcript MGP_CBAJ_T0050376.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3617935 3632050 + MGP_CBAJ_P0050376 Map4k2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050377.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3617943 3619606 + Map4k2 protein_coding retained_intron MGP_CBAJ_T0050378.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3617951 3622474 + MGP_CBAJ_P0050378 Map4k2 protein_coding protein_coding MGP_CBAJ_T0050379.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3617977 3630276 + MGP_CBAJ_P0050379 Map4k2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050380.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3617997 3620255 + Map4k2 protein_coding retained_intron MGP_CBAJ_T0050381.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3618145 3620590 + Map4k2 protein_coding processed_transcript MGP_CBAJ_T0050382.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3618176 3620253 + Map4k2 protein_coding processed_transcript MGP_CBAJ_T0050383.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3618205 3620253 + Map4k2 protein_coding retained_intron MGP_CBAJ_T0050384.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3618510 3628652 + Map4k2 protein_coding retained_intron MGP_CBAJ_T0050385.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3619268 3619577 + Map4k2 protein_coding retained_intron MGP_CBAJ_T0050386.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3620247 3621379 + Map4k2 protein_coding retained_intron MGP_CBAJ_T0050387.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3622081 3623025 + Map4k2 protein_coding retained_intron MGP_CBAJ_T0050388.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3623280 3630589 + Map4k2 protein_coding retained_intron MGP_CBAJ_T0050389.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3623400 3628424 + Map4k2 protein_coding processed_transcript MGP_CBAJ_T0050390.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3623423 3630587 + MGP_CBAJ_P0050390 Map4k2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050391.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3627673 3628345 + Map4k2 protein_coding retained_intron MGP_CBAJ_T0050392.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3629368 3632191 + Map4k2 protein_coding processed_transcript MGP_CBAJ_T0050393.1 MGP_CBAJ_G0024466.1 mouse_genomes_project 19 3629523 3630382 + Map4k2 protein_coding processed_transcript MGP_CBAJ_T0006998.1 MGP_CBAJ_G0005740.1 mouse_genomes_project 19 48341383 48341921 + Gm29594 lincRNA lincRNA MGP_CBAJ_T0050934.1 MGP_CBAJ_G0024671.1 mouse_genomes_project 19 15184311 15394508 + MGP_CBAJ_P0050934 Gna14 protein_coding protein_coding MGP_CBAJ_T0007019.1 MGP_CBAJ_G0005754.1 mouse_genomes_project 19 65305389 65307117 + Gm28351 lincRNA lincRNA MGP_CBAJ_T0017469.1 MGP_CBAJ_G0015132.1 mouse_genomes_project 19 64977408 64982072 + Gm4219 processed_transcript processed_transcript MGP_CBAJ_T0050312.1 MGP_CBAJ_G0024452.1 mouse_genomes_project 19 3321559 3325579 - MGP_CBAJ_P0050312 Zfpl1 protein_coding protein_coding MGP_CBAJ_T0050313.1 MGP_CBAJ_G0024452.1 mouse_genomes_project 19 3321562 3323625 - Zfpl1 protein_coding retained_intron MGP_CBAJ_T0050314.1 MGP_CBAJ_G0024452.1 mouse_genomes_project 19 3321965 3325551 - MGP_CBAJ_P0050314 Zfpl1 protein_coding protein_coding MGP_CBAJ_T0050315.1 MGP_CBAJ_G0024452.1 mouse_genomes_project 19 3322658 3325255 - MGP_CBAJ_P0050315 Zfpl1 protein_coding protein_coding MGP_CBAJ_T0050316.1 MGP_CBAJ_G0024452.1 mouse_genomes_project 19 3322988 3325530 - Zfpl1 protein_coding retained_intron MGP_CBAJ_T0050317.1 MGP_CBAJ_G0024452.1 mouse_genomes_project 19 3323008 3325540 - MGP_CBAJ_P0050317 Zfpl1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050318.1 MGP_CBAJ_G0024452.1 mouse_genomes_project 19 3323049 3325101 - Zfpl1 protein_coding retained_intron MGP_CBAJ_T0050319.1 MGP_CBAJ_G0024452.1 mouse_genomes_project 19 3323054 3325580 - MGP_CBAJ_P0050319 Zfpl1 protein_coding protein_coding MGP_CBAJ_T0050320.1 MGP_CBAJ_G0024452.1 mouse_genomes_project 19 3323399 3325563 - MGP_CBAJ_P0050320 Zfpl1 protein_coding protein_coding MGP_CBAJ_T0051725.1 MGP_CBAJ_G0024946.1 mouse_genomes_project 19 51311877 51322142 + MGP_CBAJ_P0051725 Gsto1 protein_coding protein_coding MGP_CBAJ_T0051726.1 MGP_CBAJ_G0024946.1 mouse_genomes_project 19 51311990 51312633 + Gsto1 protein_coding retained_intron MGP_CBAJ_T0051727.1 MGP_CBAJ_G0024946.1 mouse_genomes_project 19 51320384 51321919 + Gsto1 protein_coding retained_intron MGP_CBAJ_T0013212.1 MGP_CBAJ_G0011324.1 mouse_genomes_project 19 30835798 30836176 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0051908.1 MGP_CBAJ_G0025004.1 mouse_genomes_project 19 65617770 65693137 - MGP_CBAJ_P0051908 Cacul1 protein_coding protein_coding MGP_CBAJ_T0051909.1 MGP_CBAJ_G0025004.1 mouse_genomes_project 19 65617770 65693137 - MGP_CBAJ_P0051909 Cacul1 protein_coding protein_coding MGP_CBAJ_T0051910.1 MGP_CBAJ_G0025004.1 mouse_genomes_project 19 65617770 65693137 - MGP_CBAJ_P0051910 Cacul1 protein_coding protein_coding MGP_CBAJ_T0051007.1 MGP_CBAJ_G0024700.1 mouse_genomes_project 19 23577347 23579057 + MGP_CBAJ_P0051007 Gm9938 protein_coding protein_coding MGP_CBAJ_T0051612.1 MGP_CBAJ_G0024909.1 mouse_genomes_project 19 49198185 49221230 + Pprc1 protein_coding processed_transcript MGP_CBAJ_T0051613.1 MGP_CBAJ_G0024909.1 mouse_genomes_project 19 49215564 49234411 + MGP_CBAJ_P0051613 Pprc1 protein_coding protein_coding MGP_CBAJ_T0051614.1 MGP_CBAJ_G0024909.1 mouse_genomes_project 19 49215606 49234415 + MGP_CBAJ_P0051614 Pprc1 protein_coding protein_coding MGP_CBAJ_T0051615.1 MGP_CBAJ_G0024909.1 mouse_genomes_project 19 49215609 49234409 + MGP_CBAJ_P0051615 Pprc1 protein_coding protein_coding MGP_CBAJ_T0051616.1 MGP_CBAJ_G0024909.1 mouse_genomes_project 19 49215857 49220490 + Pprc1 protein_coding processed_transcript MGP_CBAJ_T0051617.1 MGP_CBAJ_G0024909.1 mouse_genomes_project 19 49215857 49221471 + MGP_CBAJ_P0051617 Pprc1 protein_coding protein_coding MGP_CBAJ_T0051618.1 MGP_CBAJ_G0024909.1 mouse_genomes_project 19 49215889 49221836 + MGP_CBAJ_P0051618 Pprc1 protein_coding protein_coding MGP_CBAJ_T0051619.1 MGP_CBAJ_G0024909.1 mouse_genomes_project 19 49216261 49221661 + MGP_CBAJ_P0051619 Pprc1 protein_coding protein_coding MGP_CBAJ_T0051620.1 MGP_CBAJ_G0024909.1 mouse_genomes_project 19 49216284 49221677 + MGP_CBAJ_P0051620 Pprc1 protein_coding protein_coding MGP_CBAJ_T0051621.1 MGP_CBAJ_G0024909.1 mouse_genomes_project 19 49223110 49234302 + Pprc1 protein_coding retained_intron MGP_CBAJ_T0051622.1 MGP_CBAJ_G0024909.1 mouse_genomes_project 19 49226866 49228124 + Pprc1 protein_coding processed_transcript MGP_CBAJ_T0051623.1 MGP_CBAJ_G0024909.1 mouse_genomes_project 19 49233254 49234302 + Pprc1 protein_coding retained_intron MGP_CBAJ_T0050893.1 MGP_CBAJ_G0024639.1 mouse_genomes_project 19 11289919 11290873 - MGP_CBAJ_P0050893 Olfr1457 protein_coding protein_coding MGP_CBAJ_T0101768.1 MGP_CBAJ_G0039799.1 mouse_genomes_project 19 34596115 34780280 - unprocessed_pseudogene unprocessed_pseudogene MGP_CBAJ_T0050825.1 MGP_CBAJ_G0024594.1 mouse_genomes_project 19 9523003 9534311 - MGP_CBAJ_P0050825 Ms4a3 protein_coding protein_coding MGP_CBAJ_T0050826.1 MGP_CBAJ_G0024594.1 mouse_genomes_project 19 9523006 9534340 - MGP_CBAJ_P0050826 Ms4a3 protein_coding protein_coding MGP_CBAJ_T0050827.1 MGP_CBAJ_G0024594.1 mouse_genomes_project 19 9525409 9534357 - Ms4a3 protein_coding retained_intron MGP_CBAJ_T0050974.1 MGP_CBAJ_G0024686.1 mouse_genomes_project 19 20117174 20158529 - MGP_CBAJ_P0050974 Aldh1a7 protein_coding protein_coding MGP_CBAJ_T0050688.1 MGP_CBAJ_G0024547.1 mouse_genomes_project 19 7917203 7922170 - MGP_CBAJ_P0050688 Fen1 protein_coding protein_coding MGP_CBAJ_T0050689.1 MGP_CBAJ_G0024547.1 mouse_genomes_project 19 7917209 7921943 - MGP_CBAJ_P0050689 Fen1 protein_coding protein_coding MGP_CBAJ_T0050690.1 MGP_CBAJ_G0024547.1 mouse_genomes_project 19 7917209 7922069 - MGP_CBAJ_P0050690 Fen1 protein_coding protein_coding MGP_CBAJ_T0050691.1 MGP_CBAJ_G0024547.1 mouse_genomes_project 19 7917213 7921894 - MGP_CBAJ_P0050691 Fen1 protein_coding protein_coding MGP_CBAJ_T0006977.1 MGP_CBAJ_G0005725.1 mouse_genomes_project 19 28507086 28507995 + Gm28228 lincRNA lincRNA MGP_CBAJ_T0006995.1 MGP_CBAJ_G0005738.1 mouse_genomes_project 19 48318409 48334506 - lincRNA lincRNA MGP_CBAJ_T0006996.1 MGP_CBAJ_G0005738.1 mouse_genomes_project 19 48318418 48323874 - lincRNA lincRNA MGP_CBAJ_T0013211.1 MGP_CBAJ_G0011323.1 mouse_genomes_project 19 29316863 29317660 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0051180.1 MGP_CBAJ_G0024754.1 mouse_genomes_project 19 34224101 34510673 - MGP_CBAJ_P0051180 Rnls protein_coding protein_coding MGP_CBAJ_T0051181.1 MGP_CBAJ_G0024754.1 mouse_genomes_project 19 34224101 34510643 - MGP_CBAJ_P0051181 Rnls protein_coding protein_coding MGP_CBAJ_T0010182.1 MGP_CBAJ_G0008320.1 mouse_genomes_project 19 35676712 35676821 - Gm23060 miRNA miRNA MGP_CBAJ_T0010173.1 MGP_CBAJ_G0008311.1 mouse_genomes_project 19 7909453 7909518 + Mir6993 miRNA miRNA MGP_CBAJ_T0051422.1 MGP_CBAJ_G0024845.1 mouse_genomes_project 19 44432688 44496538 + MGP_CBAJ_P0051422 Ubtd1 protein_coding protein_coding MGP_CBAJ_T0050154.1 MGP_CBAJ_G0024400.1 mouse_genomes_project 19 2206368 2207215 - MGP_CBAJ_P0050154 protein_coding protein_coding MGP_CBAJ_T0051308.1 MGP_CBAJ_G0024805.1 mouse_genomes_project 19 40837257 40956702 + MGP_CBAJ_P0051308 Tbc1d12 protein_coding protein_coding MGP_CBAJ_T0017453.1 MGP_CBAJ_G0015125.1 mouse_genomes_project 19 10689921 10700568 - A330040F15Rik processed_transcript processed_transcript MGP_CBAJ_T0050909.1 MGP_CBAJ_G0024655.1 mouse_genomes_project 19 11959379 11960830 + MGP_CBAJ_P0050909 protein_coding protein_coding MGP_CBAJ_T0017444.1 MGP_CBAJ_G0015123.1 mouse_genomes_project 19 8501854 8555555 + A430093F15Rik processed_transcript lincRNA MGP_CBAJ_T0017445.1 MGP_CBAJ_G0015123.1 mouse_genomes_project 19 8501858 8555546 + A430093F15Rik processed_transcript lincRNA MGP_CBAJ_T0017446.1 MGP_CBAJ_G0015123.1 mouse_genomes_project 19 8501867 8555189 + A430093F15Rik processed_transcript lincRNA MGP_CBAJ_T0017447.1 MGP_CBAJ_G0015123.1 mouse_genomes_project 19 8511312 8519838 + A430093F15Rik processed_transcript retained_intron MGP_CBAJ_T0017448.1 MGP_CBAJ_G0015123.1 mouse_genomes_project 19 8551426 8555551 + A430093F15Rik processed_transcript lincRNA MGP_CBAJ_T0017449.1 MGP_CBAJ_G0015123.1 mouse_genomes_project 19 8554863 8555548 + A430093F15Rik processed_transcript retained_intron MGP_CBAJ_T0050879.1 MGP_CBAJ_G0024627.1 mouse_genomes_project 19 10895524 10897497 - MGP_CBAJ_P0050879 Cntf protein_coding protein_coding MGP_CBAJ_T0051097.1 MGP_CBAJ_G0024730.1 mouse_genomes_project 19 29905097 29908480 - Rln1 protein_coding retained_intron MGP_CBAJ_T0051098.1 MGP_CBAJ_G0024730.1 mouse_genomes_project 19 29905634 29908598 - MGP_CBAJ_P0051098 Rln1 protein_coding protein_coding MGP_CBAJ_T0051739.1 MGP_CBAJ_G0024953.1 mouse_genomes_project 19 56988924 57095202 - MGP_CBAJ_P0051739 Xpnpep1 protein_coding protein_coding MGP_CBAJ_T0051740.1 MGP_CBAJ_G0024953.1 mouse_genomes_project 19 56991867 57095290 - MGP_CBAJ_P0051740 Xpnpep1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051741.1 MGP_CBAJ_G0024953.1 mouse_genomes_project 19 57045150 57076939 - Xpnpep1 protein_coding processed_transcript MGP_CBAJ_T0051742.1 MGP_CBAJ_G0024953.1 mouse_genomes_project 19 57045151 57099780 - MGP_CBAJ_P0051742 Xpnpep1 protein_coding protein_coding MGP_CBAJ_T0051743.1 MGP_CBAJ_G0024953.1 mouse_genomes_project 19 57049372 57050642 - Xpnpep1 protein_coding retained_intron MGP_CBAJ_T0051744.1 MGP_CBAJ_G0024953.1 mouse_genomes_project 19 57061936 57069374 - Xpnpep1 protein_coding processed_transcript MGP_CBAJ_T0051745.1 MGP_CBAJ_G0024953.1 mouse_genomes_project 19 57064100 57076774 - Xpnpep1 protein_coding processed_transcript MGP_CBAJ_T0051746.1 MGP_CBAJ_G0024953.1 mouse_genomes_project 19 57066215 57067638 - Xpnpep1 protein_coding retained_intron MGP_CBAJ_T0051747.1 MGP_CBAJ_G0024953.1 mouse_genomes_project 19 57066244 57095209 - MGP_CBAJ_P0051747 Xpnpep1 protein_coding protein_coding MGP_CBAJ_T0051748.1 MGP_CBAJ_G0024953.1 mouse_genomes_project 19 57074068 57088787 - Xpnpep1 protein_coding processed_transcript MGP_CBAJ_T0051749.1 MGP_CBAJ_G0024953.1 mouse_genomes_project 19 57089156 57095213 - Xpnpep1 protein_coding processed_transcript MGP_CBAJ_T0099080.1 MGP_CBAJ_G0037335.1 mouse_genomes_project 19 55106727 55106834 - Gm25644 snRNA snRNA MGP_CBAJ_T0100329.1 MGP_CBAJ_G0038584.1 mouse_genomes_project 19 39932397 39932522 + Gm23300 snoRNA snoRNA MGP_CBAJ_T0098007.1 MGP_CBAJ_G0036280.1 mouse_genomes_project 19 38902143 38902249 + Gm23918 rRNA rRNA MGP_CBAJ_T0098008.1 MGP_CBAJ_G0036281.1 mouse_genomes_project 19 45745861 45745969 - Gm22135 rRNA rRNA MGP_CBAJ_T0050484.1 MGP_CBAJ_G0024483.1 mouse_genomes_project 19 4216332 4219052 - MGP_CBAJ_P0050484 Fkbp2 protein_coding protein_coding MGP_CBAJ_T0050485.1 MGP_CBAJ_G0024483.1 mouse_genomes_project 19 4216332 4219031 - MGP_CBAJ_P0050485 Fkbp2 protein_coding protein_coding MGP_CBAJ_T0050114.1 MGP_CBAJ_G0024384.1 mouse_genomes_project 19 1916887 1923591 + Zdhhc24 protein_coding processed_transcript MGP_CBAJ_T0050115.1 MGP_CBAJ_G0024384.1 mouse_genomes_project 19 1916891 1923591 + MGP_CBAJ_P0050115 Zdhhc24 protein_coding protein_coding MGP_CBAJ_T0050116.1 MGP_CBAJ_G0024384.1 mouse_genomes_project 19 1916909 1923589 + Zdhhc24 protein_coding processed_transcript MGP_CBAJ_T0050117.1 MGP_CBAJ_G0024384.1 mouse_genomes_project 19 1916923 1923590 + MGP_CBAJ_P0050117 Zdhhc24 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050118.1 MGP_CBAJ_G0024384.1 mouse_genomes_project 19 1916942 1921977 + MGP_CBAJ_P0050118 Zdhhc24 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050119.1 MGP_CBAJ_G0024384.1 mouse_genomes_project 19 1917987 1921960 + Zdhhc24 protein_coding processed_transcript MGP_CBAJ_T0006997.1 MGP_CBAJ_G0005739.1 mouse_genomes_project 19 48334794 48335742 - Gm29593 lincRNA lincRNA MGP_CBAJ_T0051458.1 MGP_CBAJ_G0024860.1 mouse_genomes_project 19 45283480 45308302 - MGP_CBAJ_P0051458 Hps1 protein_coding protein_coding MGP_CBAJ_T0051459.1 MGP_CBAJ_G0024860.1 mouse_genomes_project 19 45283570 45308283 - Hps1 protein_coding retained_intron MGP_CBAJ_T0051460.1 MGP_CBAJ_G0024860.1 mouse_genomes_project 19 45283570 45306970 - MGP_CBAJ_P0051460 Hps1 protein_coding protein_coding MGP_CBAJ_T0051461.1 MGP_CBAJ_G0024860.1 mouse_genomes_project 19 45283572 45308300 - MGP_CBAJ_P0051461 Hps1 protein_coding protein_coding MGP_CBAJ_T0051462.1 MGP_CBAJ_G0024860.1 mouse_genomes_project 19 45283956 45286192 - MGP_CBAJ_P0051462 Hps1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051463.1 MGP_CBAJ_G0024860.1 mouse_genomes_project 19 45286443 45308289 - MGP_CBAJ_P0051463 Hps1 protein_coding protein_coding MGP_CBAJ_T0051464.1 MGP_CBAJ_G0024860.1 mouse_genomes_project 19 45286843 45306585 - MGP_CBAJ_P0051464 Hps1 protein_coding protein_coding MGP_CBAJ_T0051465.1 MGP_CBAJ_G0024860.1 mouse_genomes_project 19 45288728 45292251 - Hps1 protein_coding retained_intron MGP_CBAJ_T0051466.1 MGP_CBAJ_G0024860.1 mouse_genomes_project 19 45295172 45298174 - Hps1 protein_coding retained_intron MGP_CBAJ_T0011355.1 MGP_CBAJ_G0009493.1 mouse_genomes_project 19 40408916 40408999 - Gm24930 misc_RNA misc_RNA MGP_CBAJ_T0051020.1 MGP_CBAJ_G0024708.1 mouse_genomes_project 19 24857171 24859516 - MGP_CBAJ_P0051020 Foxd4 protein_coding protein_coding MGP_CBAJ_T0050083.1 MGP_CBAJ_G0024370.1 mouse_genomes_project 19 1499395 1501188 - MGP_CBAJ_P0050083 2010003K11Rik protein_coding protein_coding MGP_CBAJ_T0050901.1 MGP_CBAJ_G0024647.1 mouse_genomes_project 19 11623604 11624531 + MGP_CBAJ_P0050901 Olfr1467 protein_coding protein_coding MGP_CBAJ_T0017415.1 MGP_CBAJ_G0015116.1 mouse_genomes_project 19 1428622 1437906 + A930001C03Rik processed_transcript processed_transcript MGP_CBAJ_T0017416.1 MGP_CBAJ_G0015116.1 mouse_genomes_project 19 1429178 1437763 + A930001C03Rik processed_transcript processed_transcript MGP_CBAJ_T0017417.1 MGP_CBAJ_G0015116.1 mouse_genomes_project 19 1433319 1437443 + A930001C03Rik processed_transcript processed_transcript MGP_CBAJ_T0017418.1 MGP_CBAJ_G0015116.1 mouse_genomes_project 19 1436392 1437912 + A930001C03Rik processed_transcript retained_intron MGP_CBAJ_T0051556.1 MGP_CBAJ_G0024893.1 mouse_genomes_project 19 47979367 47982476 - Pdzd7 protein_coding processed_transcript MGP_CBAJ_T0051557.1 MGP_CBAJ_G0024893.1 mouse_genomes_project 19 47979368 47999044 - MGP_CBAJ_P0051557 Pdzd7 protein_coding protein_coding MGP_CBAJ_T0051558.1 MGP_CBAJ_G0024893.1 mouse_genomes_project 19 47979368 47998202 - MGP_CBAJ_P0051558 Pdzd7 protein_coding protein_coding MGP_CBAJ_T0051559.1 MGP_CBAJ_G0024893.1 mouse_genomes_project 19 47980075 47998073 - MGP_CBAJ_P0051559 Pdzd7 protein_coding unknown_likely_coding MGP_CBAJ_T0051331.1 MGP_CBAJ_G0024818.1 mouse_genomes_project 19 42251798 42291833 - MGP_CBAJ_P0051331 Cyp2c54 protein_coding protein_coding MGP_CBAJ_T0010161.1 MGP_CBAJ_G0008299.1 mouse_genomes_project 19 2853394 2853467 - Mir6987 miRNA miRNA MGP_CBAJ_T0010183.1 MGP_CBAJ_G0008321.1 mouse_genomes_project 19 36105493 36105597 + Gm27476 miRNA miRNA MGP_CBAJ_T0099071.1 MGP_CBAJ_G0037326.1 mouse_genomes_project 19 36161545 36161706 + Gm22082 snRNA snRNA MGP_CBAJ_T0051773.1 MGP_CBAJ_G0024966.1 mouse_genomes_project 19 59605557 59614477 + MGP_CBAJ_P0051773 Tectb protein_coding protein_coding MGP_CBAJ_T0051774.1 MGP_CBAJ_G0024966.1 mouse_genomes_project 19 59605560 59619677 + MGP_CBAJ_P0051774 Tectb protein_coding protein_coding MGP_CBAJ_T0051775.1 MGP_CBAJ_G0024966.1 mouse_genomes_project 19 59605709 59621121 + MGP_CBAJ_P0051775 Tectb protein_coding protein_coding MGP_CBAJ_T0051776.1 MGP_CBAJ_G0024966.1 mouse_genomes_project 19 59614389 59619502 + MGP_CBAJ_P0051776 Tectb protein_coding protein_coding MGP_CBAJ_T0051777.1 MGP_CBAJ_G0024966.1 mouse_genomes_project 19 59614441 59615136 + Tectb protein_coding retained_intron MGP_CBAJ_T0051778.1 MGP_CBAJ_G0024966.1 mouse_genomes_project 19 59616844 59621112 + Tectb protein_coding processed_transcript MGP_CBAJ_T0051202.1 MGP_CBAJ_G0024766.1 mouse_genomes_project 19 35563737 35599060 + MGP_CBAJ_P0051202 Fas protein_coding protein_coding MGP_CBAJ_T0051203.1 MGP_CBAJ_G0024766.1 mouse_genomes_project 19 35563737 35582389 + MGP_CBAJ_P0051203 Fas protein_coding protein_coding MGP_CBAJ_T0050919.1 MGP_CBAJ_G0024665.1 mouse_genomes_project 19 12279613 12280561 - MGP_CBAJ_P0050919 Olfr1501 protein_coding protein_coding MGP_CBAJ_T0049969.1 MGP_CBAJ_G0024344.1 mouse_genomes_project 19 911591 915302 + Doc2g protein_coding retained_intron MGP_CBAJ_T0049970.1 MGP_CBAJ_G0024344.1 mouse_genomes_project 19 911595 914059 + Doc2g protein_coding retained_intron MGP_CBAJ_T0049971.1 MGP_CBAJ_G0024344.1 mouse_genomes_project 19 911606 915303 + MGP_CBAJ_P0049971 Doc2g protein_coding protein_coding MGP_CBAJ_T0049972.1 MGP_CBAJ_G0024344.1 mouse_genomes_project 19 911970 914431 + Doc2g protein_coding retained_intron MGP_CBAJ_T0007012.1 MGP_CBAJ_G0005749.1 mouse_genomes_project 19 62033042 62076293 - B230217O12Rik lincRNA lincRNA MGP_CBAJ_T0010158.1 MGP_CBAJ_G0008296.1 mouse_genomes_project 19 1160359 1160446 - Gm26115 miRNA miRNA MGP_CBAJ_T0099059.1 MGP_CBAJ_G0037314.1 mouse_genomes_project 19 274507 274612 + Gm23940 snRNA snRNA MGP_CBAJ_T0050911.1 MGP_CBAJ_G0024657.1 mouse_genomes_project 19 12039423 12040374 + MGP_CBAJ_P0050911 Olfr1490 protein_coding protein_coding MGP_CBAJ_T0003793.1 MGP_CBAJ_G0003394.1 mouse_genomes_project 19 45028314 45051921 - Gm16541 antisense antisense MGP_CBAJ_T0003794.1 MGP_CBAJ_G0003394.1 mouse_genomes_project 19 45028320 45051908 - Gm16541 antisense antisense MGP_CBAJ_T0003795.1 MGP_CBAJ_G0003394.1 mouse_genomes_project 19 45051319 45051921 - Gm16541 antisense antisense MGP_CBAJ_T0051567.1 MGP_CBAJ_G0024897.1 mouse_genomes_project 19 48221091 48224224 - MGP_CBAJ_P0051567 Lbx1 protein_coding protein_coding MGP_CBAJ_T0050798.1 MGP_CBAJ_G0024587.1 mouse_genomes_project 19 9299605 9330824 + Ms4a4b protein_coding retained_intron MGP_CBAJ_T0050799.1 MGP_CBAJ_G0024587.1 mouse_genomes_project 19 9299610 9330824 + Ms4a4b protein_coding retained_intron MGP_CBAJ_T0050800.1 MGP_CBAJ_G0024587.1 mouse_genomes_project 19 9299625 9335635 + MGP_CBAJ_P0050800 Ms4a4b protein_coding protein_coding MGP_CBAJ_T0050802.1 MGP_CBAJ_G0024587.1 mouse_genomes_project 19 9333285 9335435 + Ms4a4b protein_coding retained_intron MGP_CBAJ_T0050803.1 MGP_CBAJ_G0024587.1 mouse_genomes_project 19 9333401 9335435 + Ms4a4b protein_coding processed_transcript MGP_CBAJ_T0050804.1 MGP_CBAJ_G0024587.1 mouse_genomes_project 19 9334635 9335435 + Ms4a4b protein_coding retained_intron MGP_CBAJ_T0051589.1 MGP_CBAJ_G0024903.1 mouse_genomes_project 19 48838895 48840754 - MGP_CBAJ_P0051589 Npm3 protein_coding protein_coding MGP_CBAJ_T0051590.1 MGP_CBAJ_G0024903.1 mouse_genomes_project 19 48839705 48840712 - Npm3 protein_coding retained_intron MGP_CBAJ_T0050761.1 MGP_CBAJ_G0024573.1 mouse_genomes_project 19 8764506 8776884 - MGP_CBAJ_P0050761 Ms4a10 protein_coding protein_coding MGP_CBAJ_T0050762.1 MGP_CBAJ_G0024573.1 mouse_genomes_project 19 8764510 8776859 - MGP_CBAJ_P0050762 Ms4a10 protein_coding protein_coding MGP_CBAJ_T0050763.1 MGP_CBAJ_G0024573.1 mouse_genomes_project 19 8764513 8768070 - MGP_CBAJ_P0050763 Ms4a10 protein_coding protein_coding MGP_CBAJ_T0050324.1 MGP_CBAJ_G0024454.1 mouse_genomes_project 19 3355093 3365038 + MGP_CBAJ_P0050324 Naaladl1 protein_coding protein_coding MGP_CBAJ_T0098009.1 MGP_CBAJ_G0036282.1 mouse_genomes_project 19 46641471 46641588 + n-R5s21 rRNA rRNA MGP_CBAJ_T0010204.1 MGP_CBAJ_G0008342.1 mouse_genomes_project 19 63817759 63817846 - Mir3086 miRNA miRNA MGP_CBAJ_T0051379.1 MGP_CBAJ_G0024830.1 mouse_genomes_project 19 43414115 43432097 - MGP_CBAJ_P0051379 Opalin protein_coding protein_coding MGP_CBAJ_T0050344.1 MGP_CBAJ_G0024460.1 mouse_genomes_project 19 3494425 3495859 + MGP_CBAJ_P0050344 Gpha2 protein_coding protein_coding MGP_CBAJ_T0050345.1 MGP_CBAJ_G0024460.1 mouse_genomes_project 19 3494433 3495859 + MGP_CBAJ_P0050345 Gpha2 protein_coding protein_coding MGP_CBAJ_T0050788.1 MGP_CBAJ_G0024583.1 mouse_genomes_project 19 9126270 9139457 - MGP_CBAJ_P0050788 Ms4a14 protein_coding protein_coding MGP_CBAJ_T0017399.1 MGP_CBAJ_G0015115.1 mouse_genomes_project 19 1057809 1064144 + Tmem134 processed_transcript processed_transcript MGP_CBAJ_T0017400.1 MGP_CBAJ_G0015115.1 mouse_genomes_project 19 1057834 1063586 + Tmem134 processed_transcript processed_transcript MGP_CBAJ_T0017401.1 MGP_CBAJ_G0015115.1 mouse_genomes_project 19 1057834 1063303 + Tmem134 processed_transcript processed_transcript MGP_CBAJ_T0017402.1 MGP_CBAJ_G0015115.1 mouse_genomes_project 19 1057834 1063586 + Tmem134 processed_transcript processed_transcript MGP_CBAJ_T0017403.1 MGP_CBAJ_G0015115.1 mouse_genomes_project 19 1057834 1063585 + Tmem134 processed_transcript retained_intron MGP_CBAJ_T0017404.1 MGP_CBAJ_G0015115.1 mouse_genomes_project 19 1057834 1063586 + Tmem134 processed_transcript processed_transcript MGP_CBAJ_T0017405.1 MGP_CBAJ_G0015115.1 mouse_genomes_project 19 1057835 1064144 + Tmem134 processed_transcript retained_intron MGP_CBAJ_T0017406.1 MGP_CBAJ_G0015115.1 mouse_genomes_project 19 1057835 1064166 + Tmem134 processed_transcript processed_transcript MGP_CBAJ_T0017407.1 MGP_CBAJ_G0015115.1 mouse_genomes_project 19 1057835 1064164 + Tmem134 processed_transcript processed_transcript MGP_CBAJ_T0017408.1 MGP_CBAJ_G0015115.1 mouse_genomes_project 19 1057850 1063586 + Tmem134 processed_transcript processed_transcript MGP_CBAJ_T0017409.1 MGP_CBAJ_G0015115.1 mouse_genomes_project 19 1057854 1063594 + Tmem134 processed_transcript processed_transcript MGP_CBAJ_T0017410.1 MGP_CBAJ_G0015115.1 mouse_genomes_project 19 1057862 1063589 + Tmem134 processed_transcript processed_transcript MGP_CBAJ_T0017411.1 MGP_CBAJ_G0015115.1 mouse_genomes_project 19 1057864 1063586 + Tmem134 processed_transcript processed_transcript MGP_CBAJ_T0017412.1 MGP_CBAJ_G0015115.1 mouse_genomes_project 19 1057864 1059614 + Tmem134 processed_transcript processed_transcript MGP_CBAJ_T0017413.1 MGP_CBAJ_G0015115.1 mouse_genomes_project 19 1057904 1063591 + Tmem134 processed_transcript processed_transcript MGP_CBAJ_T0017414.1 MGP_CBAJ_G0015115.1 mouse_genomes_project 19 1059446 1063116 + Tmem134 processed_transcript processed_transcript MGP_CBAJ_T0050828.1 MGP_CBAJ_G0024595.1 mouse_genomes_project 19 9546226 9559184 - MGP_CBAJ_P0050828 Oosp2 protein_coding protein_coding MGP_CBAJ_T0050829.1 MGP_CBAJ_G0024595.1 mouse_genomes_project 19 9546227 9559227 - MGP_CBAJ_P0050829 Oosp2 protein_coding protein_coding MGP_CBAJ_T0050494.1 MGP_CBAJ_G0024488.1 mouse_genomes_project 19 4243727 4273901 - MGP_CBAJ_P0050494 Fermt3 protein_coding protein_coding MGP_CBAJ_T0051204.1 MGP_CBAJ_G0024767.1 mouse_genomes_project 19 35774808 35776158 - MGP_CBAJ_P0051204 Ch25h protein_coding protein_coding MGP_CBAJ_T0051188.1 MGP_CBAJ_G0024759.1 mouse_genomes_project 19 35203069 35224506 + MGP_CBAJ_P0051188 Lipf protein_coding protein_coding MGP_CBAJ_T0010185.1 MGP_CBAJ_G0008323.1 mouse_genomes_project 19 36372792 36372866 + Mir1950 miRNA miRNA MGP_CBAJ_T0050144.1 MGP_CBAJ_G0024398.1 mouse_genomes_project 19 2166484 2174274 - MGP_CBAJ_P0050144 Rab1b protein_coding protein_coding MGP_CBAJ_T0050046.1 MGP_CBAJ_G0024365.1 mouse_genomes_project 19 1220990 1238591 - MGP_CBAJ_P0050046 Ankrd13d protein_coding protein_coding MGP_CBAJ_T0050047.1 MGP_CBAJ_G0024365.1 mouse_genomes_project 19 1220990 1237631 - MGP_CBAJ_P0050047 Ankrd13d protein_coding protein_coding MGP_CBAJ_T0050048.1 MGP_CBAJ_G0024365.1 mouse_genomes_project 19 1220992 1238593 - MGP_CBAJ_P0050048 Ankrd13d protein_coding nonsense_mediated_decay MGP_CBAJ_T0050049.1 MGP_CBAJ_G0024365.1 mouse_genomes_project 19 1221208 1222105 - MGP_CBAJ_P0050049 Ankrd13d protein_coding nonsense_mediated_decay MGP_CBAJ_T0050050.1 MGP_CBAJ_G0024365.1 mouse_genomes_project 19 1223425 1236467 - MGP_CBAJ_P0050050 Ankrd13d protein_coding nonsense_mediated_decay MGP_CBAJ_T0050051.1 MGP_CBAJ_G0024365.1 mouse_genomes_project 19 1234923 1238593 - Ankrd13d protein_coding processed_transcript MGP_CBAJ_T0050052.1 MGP_CBAJ_G0024365.1 mouse_genomes_project 19 1236101 1238489 - MGP_CBAJ_P0050052 Ankrd13d protein_coding protein_coding MGP_CBAJ_T0003789.1 MGP_CBAJ_G0003391.1 mouse_genomes_project 19 29573648 29576133 + 1700018L02Rik antisense antisense MGP_CBAJ_T0050620.1 MGP_CBAJ_G0024519.1 mouse_genomes_project 19 6330935 6341198 - MGP_CBAJ_P0050620 Ttc9c protein_coding protein_coding MGP_CBAJ_T0050621.1 MGP_CBAJ_G0024519.1 mouse_genomes_project 19 6333007 6340789 - MGP_CBAJ_P0050621 Ttc9c protein_coding protein_coding MGP_CBAJ_T0050622.1 MGP_CBAJ_G0024519.1 mouse_genomes_project 19 6333167 6341159 - MGP_CBAJ_P0050622 Ttc9c protein_coding protein_coding MGP_CBAJ_T0050623.1 MGP_CBAJ_G0024519.1 mouse_genomes_project 19 6340161 6341097 - Ttc9c protein_coding retained_intron MGP_CBAJ_T0010179.1 MGP_CBAJ_G0008317.1 mouse_genomes_project 19 29676688 29676785 + Mir101b miRNA miRNA MGP_CBAJ_T0050508.1 MGP_CBAJ_G0024496.1 mouse_genomes_project 19 4564195 4633914 - MGP_CBAJ_P0050508 Mark2 protein_coding protein_coding MGP_CBAJ_T0050509.1 MGP_CBAJ_G0024496.1 mouse_genomes_project 19 4564198 4634512 - MGP_CBAJ_P0050509 Mark2 protein_coding protein_coding MGP_CBAJ_T0050510.1 MGP_CBAJ_G0024496.1 mouse_genomes_project 19 4565536 4634492 - MGP_CBAJ_P0050510 Mark2 protein_coding protein_coding MGP_CBAJ_T0050511.1 MGP_CBAJ_G0024496.1 mouse_genomes_project 19 4565561 4633885 - MGP_CBAJ_P0050511 Mark2 protein_coding protein_coding MGP_CBAJ_T0050512.1 MGP_CBAJ_G0024496.1 mouse_genomes_project 19 4565650 4634497 - MGP_CBAJ_P0050512 Mark2 protein_coding protein_coding MGP_CBAJ_T0050513.1 MGP_CBAJ_G0024496.1 mouse_genomes_project 19 4565650 4571852 - MGP_CBAJ_P0050513 Mark2 protein_coding protein_coding MGP_CBAJ_T0050514.1 MGP_CBAJ_G0024496.1 mouse_genomes_project 19 4565653 4566896 - Mark2 protein_coding retained_intron MGP_CBAJ_T0050515.1 MGP_CBAJ_G0024496.1 mouse_genomes_project 19 4565891 4633914 - MGP_CBAJ_P0050515 Mark2 protein_coding protein_coding MGP_CBAJ_T0050516.1 MGP_CBAJ_G0024496.1 mouse_genomes_project 19 4566081 4571867 - MGP_CBAJ_P0050516 Mark2 protein_coding protein_coding MGP_CBAJ_T0050517.1 MGP_CBAJ_G0024496.1 mouse_genomes_project 19 4566246 4571980 - MGP_CBAJ_P0050517 Mark2 protein_coding protein_coding MGP_CBAJ_T0050518.1 MGP_CBAJ_G0024496.1 mouse_genomes_project 19 4567303 4572319 - MGP_CBAJ_P0050518 Mark2 protein_coding protein_coding MGP_CBAJ_T0050519.1 MGP_CBAJ_G0024496.1 mouse_genomes_project 19 4567961 4570743 - MGP_CBAJ_P0050519 Mark2 protein_coding protein_coding MGP_CBAJ_T0050520.1 MGP_CBAJ_G0024496.1 mouse_genomes_project 19 4569838 4571912 - MGP_CBAJ_P0050520 Mark2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050521.1 MGP_CBAJ_G0024496.1 mouse_genomes_project 19 4571938 4573580 - Mark2 protein_coding retained_intron MGP_CBAJ_T0050522.1 MGP_CBAJ_G0024496.1 mouse_genomes_project 19 4573558 4576165 - Mark2 protein_coding retained_intron MGP_CBAJ_T0050523.1 MGP_CBAJ_G0024496.1 mouse_genomes_project 19 4574621 4634553 - MGP_CBAJ_P0050523 Mark2 protein_coding protein_coding MGP_CBAJ_T0050524.1 MGP_CBAJ_G0024496.1 mouse_genomes_project 19 4576138 4634297 - MGP_CBAJ_P0050524 Mark2 protein_coding protein_coding MGP_CBAJ_T0050525.1 MGP_CBAJ_G0024496.1 mouse_genomes_project 19 4579116 4634335 - MGP_CBAJ_P0050525 Mark2 protein_coding protein_coding MGP_CBAJ_T0050526.1 MGP_CBAJ_G0024496.1 mouse_genomes_project 19 4579445 4634505 - MGP_CBAJ_P0050526 Mark2 protein_coding protein_coding MGP_CBAJ_T0011345.1 MGP_CBAJ_G0009483.1 mouse_genomes_project 19 3047108 3047218 - Gm27505 misc_RNA misc_RNA MGP_CBAJ_T0051840.1 MGP_CBAJ_G0024981.1 mouse_genomes_project 19 61541779 61581686 + MGP_CBAJ_P0051840 Vwa2 protein_coding protein_coding MGP_CBAJ_T0050342.1 MGP_CBAJ_G0024459.1 mouse_genomes_project 19 3450115 3492252 + MGP_CBAJ_P0050342 Majin protein_coding protein_coding MGP_CBAJ_T0050343.1 MGP_CBAJ_G0024459.1 mouse_genomes_project 19 3450194 3492258 + MGP_CBAJ_P0050343 Majin protein_coding protein_coding MGP_CBAJ_T0051522.1 MGP_CBAJ_G0024879.1 mouse_genomes_project 19 47052962 47066574 + MGP_CBAJ_P0051522 Scd2 protein_coding protein_coding MGP_CBAJ_T0051516.1 MGP_CBAJ_G0024876.1 mouse_genomes_project 19 46881252 46888389 - MGP_CBAJ_P0051516 Bloc1s2 protein_coding protein_coding MGP_CBAJ_T0051731.1 MGP_CBAJ_G0024948.1 mouse_genomes_project 19 51398784 51502504 + MGP_CBAJ_P0051731 Cfap58 protein_coding protein_coding MGP_CBAJ_T0050142.1 MGP_CBAJ_G0024396.1 mouse_genomes_project 19 2154684 2158985 + MGP_CBAJ_P0050142 Yif1a protein_coding protein_coding MGP_CBAJ_T0050555.1 MGP_CBAJ_G0024506.1 mouse_genomes_project 19 5205055 5824277 - protein_coding processed_transcript MGP_CBAJ_T0050558.1 MGP_CBAJ_G0024506.1 mouse_genomes_project 19 5603784 5680995 - MGP_CBAJ_P0050558 protein_coding protein_coding MGP_CBAJ_T0050664.1 MGP_CBAJ_G0024535.1 mouse_genomes_project 19 6510665 6524702 + MGP_CBAJ_P0050664 Eef1g protein_coding protein_coding MGP_CBAJ_T0050665.1 MGP_CBAJ_G0024535.1 mouse_genomes_project 19 6511194 6516956 + Eef1g protein_coding processed_transcript MGP_CBAJ_T0050666.1 MGP_CBAJ_G0024535.1 mouse_genomes_project 19 6511840 6517076 + Eef1g protein_coding processed_transcript MGP_CBAJ_T0050667.1 MGP_CBAJ_G0024535.1 mouse_genomes_project 19 6511840 6514641 + Eef1g protein_coding retained_intron MGP_CBAJ_T0050668.1 MGP_CBAJ_G0024535.1 mouse_genomes_project 19 6511840 6513131 + Eef1g protein_coding retained_intron MGP_CBAJ_T0050984.1 MGP_CBAJ_G0024691.1 mouse_genomes_project 19 21123158 21200216 - MGP_CBAJ_P0050984 1110059E24Rik protein_coding protein_coding MGP_CBAJ_T0050985.1 MGP_CBAJ_G0024691.1 mouse_genomes_project 19 21141858 21200196 - MGP_CBAJ_P0050985 1110059E24Rik protein_coding protein_coding MGP_CBAJ_T0050986.1 MGP_CBAJ_G0024691.1 mouse_genomes_project 19 21142249 21200288 - MGP_CBAJ_P0050986 1110059E24Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0050987.1 MGP_CBAJ_G0024691.1 mouse_genomes_project 19 21142718 21176865 - MGP_CBAJ_P0050987 1110059E24Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0050988.1 MGP_CBAJ_G0024691.1 mouse_genomes_project 19 21142873 21200405 - MGP_CBAJ_P0050988 1110059E24Rik protein_coding protein_coding MGP_CBAJ_T0050989.1 MGP_CBAJ_G0024691.1 mouse_genomes_project 19 21143362 21150300 - 1110059E24Rik protein_coding processed_transcript MGP_CBAJ_T0050990.1 MGP_CBAJ_G0024691.1 mouse_genomes_project 19 21143374 21200098 - MGP_CBAJ_P0050990 1110059E24Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0050991.1 MGP_CBAJ_G0024691.1 mouse_genomes_project 19 21161174 21200281 - 1110059E24Rik protein_coding retained_intron MGP_CBAJ_T0017419.1 MGP_CBAJ_G0015117.1 mouse_genomes_project 19 2999245 3000233 + Gm20417 processed_transcript processed_transcript MGP_CBAJ_T0099079.1 MGP_CBAJ_G0037334.1 mouse_genomes_project 19 51131365 51131469 - Gm24805 snRNA snRNA MGP_CBAJ_T0050687.1 MGP_CBAJ_G0024546.1 mouse_genomes_project 19 7900967 7914948 + MGP_CBAJ_P0050687 Fads1 protein_coding protein_coding MGP_CBAJ_T0099069.1 MGP_CBAJ_G0037324.1 mouse_genomes_project 19 26451306 26451431 - Gm25176 snRNA snRNA MGP_CBAJ_T0051483.1 MGP_CBAJ_G0024868.1 mouse_genomes_project 19 46437383 46454709 + MGP_CBAJ_P0051483 Cutc protein_coding protein_coding MGP_CBAJ_T0051484.1 MGP_CBAJ_G0024868.1 mouse_genomes_project 19 46437485 46454716 + MGP_CBAJ_P0051484 Cutc protein_coding protein_coding MGP_CBAJ_T0051485.1 MGP_CBAJ_G0024868.1 mouse_genomes_project 19 46437524 46454316 + MGP_CBAJ_P0051485 Cutc protein_coding protein_coding MGP_CBAJ_T0051486.1 MGP_CBAJ_G0024868.1 mouse_genomes_project 19 46450950 46454716 + Cutc protein_coding retained_intron MGP_CBAJ_T0051383.1 MGP_CBAJ_G0024833.1 mouse_genomes_project 19 43638907 43765279 - MGP_CBAJ_P0051383 Pik3ap1 protein_coding protein_coding MGP_CBAJ_T0051906.1 MGP_CBAJ_G0025002.1 mouse_genomes_project 19 65261342 65288129 - MGP_CBAJ_P0051906 Fam204a protein_coding unknown_likely_coding MGP_CBAJ_T0050625.1 MGP_CBAJ_G0024521.1 mouse_genomes_project 19 6358783 6361094 - MGP_CBAJ_P0050625 Gng3 protein_coding protein_coding MGP_CBAJ_T0010174.1 MGP_CBAJ_G0008312.1 mouse_genomes_project 19 9856082 9856155 + Mir6994 miRNA miRNA MGP_CBAJ_T0051187.1 MGP_CBAJ_G0024758.1 mouse_genomes_project 19 34839582 35005187 - MGP_CBAJ_P0051187 protein_coding protein_coding MGP_CBAJ_T0051433.1 MGP_CBAJ_G0024852.1 mouse_genomes_project 19 44614450 44618762 + MGP_CBAJ_P0051433 Marveld1 protein_coding protein_coding MGP_CBAJ_T0051434.1 MGP_CBAJ_G0024852.1 mouse_genomes_project 19 44614767 44618521 + MGP_CBAJ_P0051434 Marveld1 protein_coding protein_coding MGP_CBAJ_T0050910.1 MGP_CBAJ_G0024656.1 mouse_genomes_project 19 12015770 12016712 + MGP_CBAJ_P0050910 Olfr1489 protein_coding protein_coding MGP_CBAJ_T0050722.1 MGP_CBAJ_G0024560.1 mouse_genomes_project 19 8359385 8383568 + MGP_CBAJ_P0050722 Ddb1 protein_coding protein_coding MGP_CBAJ_T0011351.1 MGP_CBAJ_G0009489.1 mouse_genomes_project 19 30969621 30969902 + Gm24883 misc_RNA misc_RNA MGP_CBAJ_T0013209.1 MGP_CBAJ_G0011321.1 mouse_genomes_project 19 29235483 29235876 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0051032.1 MGP_CBAJ_G0024715.1 mouse_genomes_project 19 26845623 27045297 + MGP_CBAJ_P0051032 Smarca2 protein_coding protein_coding MGP_CBAJ_T0051033.1 MGP_CBAJ_G0024715.1 mouse_genomes_project 19 26845627 27045251 + MGP_CBAJ_P0051033 Smarca2 protein_coding protein_coding MGP_CBAJ_T0051034.1 MGP_CBAJ_G0024715.1 mouse_genomes_project 19 26866570 26874396 + MGP_CBAJ_P0051034 Smarca2 protein_coding protein_coding MGP_CBAJ_T0051035.1 MGP_CBAJ_G0024715.1 mouse_genomes_project 19 26919274 26926366 + Smarca2 protein_coding retained_intron MGP_CBAJ_T0051036.1 MGP_CBAJ_G0024715.1 mouse_genomes_project 19 26928798 27018915 + Smarca2 protein_coding processed_transcript MGP_CBAJ_T0051037.1 MGP_CBAJ_G0024715.1 mouse_genomes_project 19 26978727 27038736 + Smarca2 protein_coding retained_intron MGP_CBAJ_T0051038.1 MGP_CBAJ_G0024715.1 mouse_genomes_project 19 26984560 27018955 + Smarca2 protein_coding processed_transcript MGP_CBAJ_T0051039.1 MGP_CBAJ_G0024715.1 mouse_genomes_project 19 27015470 27044452 + MGP_CBAJ_P0051039 Smarca2 protein_coding protein_coding MGP_CBAJ_T0051040.1 MGP_CBAJ_G0024715.1 mouse_genomes_project 19 27015625 27044346 + MGP_CBAJ_P0051040 Smarca2 protein_coding protein_coding MGP_CBAJ_T0051041.1 MGP_CBAJ_G0024715.1 mouse_genomes_project 19 27015660 27043218 + MGP_CBAJ_P0051041 Smarca2 protein_coding protein_coding MGP_CBAJ_T0051042.1 MGP_CBAJ_G0024715.1 mouse_genomes_project 19 27015661 27044346 + MGP_CBAJ_P0051042 Smarca2 protein_coding protein_coding MGP_CBAJ_T0051043.1 MGP_CBAJ_G0024715.1 mouse_genomes_project 19 27015661 27045249 + MGP_CBAJ_P0051043 Smarca2 protein_coding protein_coding MGP_CBAJ_T0051044.1 MGP_CBAJ_G0024715.1 mouse_genomes_project 19 27016736 27041281 + MGP_CBAJ_P0051044 Smarca2 protein_coding protein_coding MGP_CBAJ_T0051045.1 MGP_CBAJ_G0024715.1 mouse_genomes_project 19 27017945 27037978 + MGP_CBAJ_P0051045 Smarca2 protein_coding protein_coding MGP_CBAJ_T0051046.1 MGP_CBAJ_G0024715.1 mouse_genomes_project 19 27018927 27045297 + MGP_CBAJ_P0051046 Smarca2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051047.1 MGP_CBAJ_G0024715.1 mouse_genomes_project 19 27020588 27044627 + MGP_CBAJ_P0051047 Smarca2 protein_coding protein_coding MGP_CBAJ_T0051048.1 MGP_CBAJ_G0024715.1 mouse_genomes_project 19 27037473 27044408 + MGP_CBAJ_P0051048 Smarca2 protein_coding protein_coding MGP_CBAJ_T0010205.1 MGP_CBAJ_G0008343.1 mouse_genomes_project 19 65692642 65692731 + Gm25238 miRNA miRNA MGP_CBAJ_T0050111.1 MGP_CBAJ_G0024382.1 mouse_genomes_project 19 1887435 1893219 + MGP_CBAJ_P0050111 Ctsf protein_coding protein_coding MGP_CBAJ_T0050486.1 MGP_CBAJ_G0024484.1 mouse_genomes_project 19 4221063 4228916 - MGP_CBAJ_P0050486 Vegfb protein_coding protein_coding MGP_CBAJ_T0050487.1 MGP_CBAJ_G0024484.1 mouse_genomes_project 19 4221063 4228894 - MGP_CBAJ_P0050487 Vegfb protein_coding protein_coding MGP_CBAJ_T0050488.1 MGP_CBAJ_G0024484.1 mouse_genomes_project 19 4227658 4228405 - Vegfb protein_coding retained_intron MGP_CBAJ_T0003796.1 MGP_CBAJ_G0003395.1 mouse_genomes_project 19 47672765 47683507 - Gm20395 antisense antisense MGP_CBAJ_T0050101.1 MGP_CBAJ_G0024378.1 mouse_genomes_project 19 1805114 1816335 - MGP_CBAJ_P0050101 protein_coding protein_coding MGP_CBAJ_T0050104.1 MGP_CBAJ_G0024378.1 mouse_genomes_project 19 1810889 1816317 - protein_coding retained_intron MGP_CBAJ_T0050733.1 MGP_CBAJ_G0024566.1 mouse_genomes_project 19 8614319 8617939 + Slc15a3 protein_coding processed_transcript MGP_CBAJ_T0050734.1 MGP_CBAJ_G0024566.1 mouse_genomes_project 19 8617136 8635222 + MGP_CBAJ_P0050734 Slc15a3 protein_coding protein_coding MGP_CBAJ_T0050735.1 MGP_CBAJ_G0024566.1 mouse_genomes_project 19 8617142 8618063 + Slc15a3 protein_coding processed_transcript MGP_CBAJ_T0050736.1 MGP_CBAJ_G0024566.1 mouse_genomes_project 19 8617486 8636669 + Slc15a3 protein_coding retained_intron MGP_CBAJ_T0051154.1 MGP_CBAJ_G0024746.1 mouse_genomes_project 19 31910526 31914276 + MGP_CBAJ_P0051154 Cstf2t protein_coding protein_coding MGP_CBAJ_T0050721.1 MGP_CBAJ_G0024559.1 mouse_genomes_project 19 8345961 8358019 - MGP_CBAJ_P0050721 Tkfc protein_coding protein_coding MGP_CBAJ_T0050895.1 MGP_CBAJ_G0024641.1 mouse_genomes_project 19 11332813 11333914 - MGP_CBAJ_P0050895 Olfr1459 protein_coding protein_coding MGP_CBAJ_T0050768.1 MGP_CBAJ_G0024576.1 mouse_genomes_project 19 8882948 8898906 - MGP_CBAJ_P0050768 Ms4a8a protein_coding protein_coding MGP_CBAJ_T0050769.1 MGP_CBAJ_G0024576.1 mouse_genomes_project 19 8893393 8898906 - Ms4a8a protein_coding retained_intron MGP_CBAJ_T0051673.1 MGP_CBAJ_G0024925.1 mouse_genomes_project 19 49917972 49923804 - MGP_CBAJ_P0051673 Cyp17a1 protein_coding protein_coding MGP_CBAJ_T0051674.1 MGP_CBAJ_G0024925.1 mouse_genomes_project 19 49918894 49920317 - Cyp17a1 protein_coding retained_intron MGP_CBAJ_T0051675.1 MGP_CBAJ_G0024925.1 mouse_genomes_project 19 49921529 49922095 - Cyp17a1 protein_coding retained_intron MGP_CBAJ_T0050840.1 MGP_CBAJ_G0024601.1 mouse_genomes_project 19 9779852 9780357 - MGP_CBAJ_P0050840 protein_coding protein_coding MGP_CBAJ_T0050354.1 MGP_CBAJ_G0024463.1 mouse_genomes_project 19 3550944 3574086 + MGP_CBAJ_P0050354 Ehd1 protein_coding protein_coding MGP_CBAJ_T0050355.1 MGP_CBAJ_G0024463.1 mouse_genomes_project 19 3551145 3555613 + Ehd1 protein_coding retained_intron MGP_CBAJ_T0050356.1 MGP_CBAJ_G0024463.1 mouse_genomes_project 19 3568244 3571865 + Ehd1 protein_coding retained_intron MGP_CBAJ_T0050357.1 MGP_CBAJ_G0024463.1 mouse_genomes_project 19 3571901 3572348 + Ehd1 protein_coding processed_transcript MGP_CBAJ_T0000982.1 MGP_CBAJ_G0000914.1 mouse_genomes_project 19 9482866 9484398 - TEC TEC MGP_CBAJ_T0050015.1 MGP_CBAJ_G0024355.1 mouse_genomes_project 19 1081544 1089527 + MGP_CBAJ_P0050015 Coro1b protein_coding protein_coding MGP_CBAJ_T0050016.1 MGP_CBAJ_G0024355.1 mouse_genomes_project 19 1081544 1083431 + MGP_CBAJ_P0050016 Coro1b protein_coding protein_coding MGP_CBAJ_T0050017.1 MGP_CBAJ_G0024355.1 mouse_genomes_project 19 1081553 1082481 + Coro1b protein_coding retained_intron MGP_CBAJ_T0050018.1 MGP_CBAJ_G0024355.1 mouse_genomes_project 19 1081557 1082561 + Coro1b protein_coding retained_intron MGP_CBAJ_T0050019.1 MGP_CBAJ_G0024355.1 mouse_genomes_project 19 1081586 1084426 + Coro1b protein_coding processed_transcript MGP_CBAJ_T0050020.1 MGP_CBAJ_G0024355.1 mouse_genomes_project 19 1081589 1083180 + Coro1b protein_coding retained_intron MGP_CBAJ_T0050021.1 MGP_CBAJ_G0024355.1 mouse_genomes_project 19 1083469 1088300 + Coro1b protein_coding retained_intron MGP_CBAJ_T0050022.1 MGP_CBAJ_G0024355.1 mouse_genomes_project 19 1084296 1088936 + Coro1b protein_coding retained_intron MGP_CBAJ_T0050023.1 MGP_CBAJ_G0024355.1 mouse_genomes_project 19 1084506 1089153 + Coro1b protein_coding retained_intron MGP_CBAJ_T0050232.1 MGP_CBAJ_G0024428.1 mouse_genomes_project 19 2866670 2880385 + MGP_CBAJ_P0050232 Map3k11 protein_coding protein_coding MGP_CBAJ_T0051194.1 MGP_CBAJ_G0024763.1 mouse_genomes_project 19 35394088 35431157 - MGP_CBAJ_P0051194 Ankrd22 protein_coding protein_coding MGP_CBAJ_T0051195.1 MGP_CBAJ_G0024763.1 mouse_genomes_project 19 35394464 35426099 - Ankrd22 protein_coding processed_transcript MGP_CBAJ_T0051196.1 MGP_CBAJ_G0024763.1 mouse_genomes_project 19 35394464 35400396 - Ankrd22 protein_coding processed_transcript MGP_CBAJ_T0051008.1 MGP_CBAJ_G0024701.1 mouse_genomes_project 19 23609241 23833475 + MGP_CBAJ_P0051008 Apba1 protein_coding protein_coding MGP_CBAJ_T0050155.1 MGP_CBAJ_G0024401.1 mouse_genomes_project 19 2207862 2375208 - MGP_CBAJ_P0050155 Pacs1 protein_coding protein_coding MGP_CBAJ_T0051182.1 MGP_CBAJ_G0024755.1 mouse_genomes_project 19 34503162 34984721 - protein_coding processed_transcript MGP_CBAJ_T0051186.1 MGP_CBAJ_G0024755.1 mouse_genomes_project 19 34668152 34675322 - protein_coding retained_intron MGP_CBAJ_T0051895.1 MGP_CBAJ_G0024996.1 mouse_genomes_project 19 64101703 64105573 - MGP_CBAJ_P0051895 Vax1 protein_coding protein_coding MGP_CBAJ_T0051896.1 MGP_CBAJ_G0024996.1 mouse_genomes_project 19 64102114 64102497 - Vax1 protein_coding processed_transcript MGP_CBAJ_T0051552.1 MGP_CBAJ_G0024891.1 mouse_genomes_project 19 47952963 47959001 + MGP_CBAJ_P0051552 Peo1 protein_coding protein_coding MGP_CBAJ_T0003790.1 MGP_CBAJ_G0003392.1 mouse_genomes_project 19 40199298 40216755 - Gm42723 antisense antisense MGP_CBAJ_T0003791.1 MGP_CBAJ_G0003392.1 mouse_genomes_project 19 40215696 40216740 - Gm42723 antisense antisense MGP_CBAJ_T0051382.1 MGP_CBAJ_G0024832.1 mouse_genomes_project 19 43575493 43628673 - MGP_CBAJ_P0051382 Tm9sf3 protein_coding protein_coding MGP_CBAJ_T0017457.1 MGP_CBAJ_G0015128.1 mouse_genomes_project 19 28406476 28407973 + Gm20407 processed_transcript processed_transcript MGP_CBAJ_T0006953.1 MGP_CBAJ_G0005710.1 mouse_genomes_project 19 1105038 1109757 + Gm17552 lincRNA lincRNA MGP_CBAJ_T0050079.1 MGP_CBAJ_G0024369.1 mouse_genomes_project 19 1435489 1474683 - MGP_CBAJ_P0050079 Syt12 protein_coding protein_coding MGP_CBAJ_T0050080.1 MGP_CBAJ_G0024369.1 mouse_genomes_project 19 1437296 1444848 - Syt12 protein_coding processed_transcript MGP_CBAJ_T0050081.1 MGP_CBAJ_G0024369.1 mouse_genomes_project 19 1451213 1474364 - MGP_CBAJ_P0050081 Syt12 protein_coding protein_coding MGP_CBAJ_T0050082.1 MGP_CBAJ_G0024369.1 mouse_genomes_project 19 1460429 1474394 - Syt12 protein_coding retained_intron MGP_CBAJ_T0051784.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60229823 60446792 + MGP_CBAJ_P0051784 Tcf7l2 protein_coding protein_coding MGP_CBAJ_T0051785.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60229823 60446792 + MGP_CBAJ_P0051785 Tcf7l2 protein_coding protein_coding MGP_CBAJ_T0051786.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60229833 60446390 + MGP_CBAJ_P0051786 Tcf7l2 protein_coding protein_coding MGP_CBAJ_T0051787.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60229833 60446367 + MGP_CBAJ_P0051787 Tcf7l2 protein_coding protein_coding MGP_CBAJ_T0051788.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60229897 60438377 + MGP_CBAJ_P0051788 Tcf7l2 protein_coding protein_coding MGP_CBAJ_T0051789.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60229897 60445853 + MGP_CBAJ_P0051789 Tcf7l2 protein_coding protein_coding MGP_CBAJ_T0051790.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60230088 60445347 + MGP_CBAJ_P0051790 Tcf7l2 protein_coding protein_coding MGP_CBAJ_T0051791.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60230272 60424867 + MGP_CBAJ_P0051791 Tcf7l2 protein_coding protein_coding MGP_CBAJ_T0051792.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60230273 60424867 + MGP_CBAJ_P0051792 Tcf7l2 protein_coding protein_coding MGP_CBAJ_T0051793.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60230273 60424866 + MGP_CBAJ_P0051793 Tcf7l2 protein_coding protein_coding MGP_CBAJ_T0051794.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60230314 60422697 + Tcf7l2 protein_coding retained_intron MGP_CBAJ_T0051795.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60230314 60438374 + MGP_CBAJ_P0051795 Tcf7l2 protein_coding protein_coding MGP_CBAJ_T0051796.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60230363 60446792 + MGP_CBAJ_P0051796 Tcf7l2 protein_coding protein_coding MGP_CBAJ_T0051797.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60230395 60446369 + MGP_CBAJ_P0051797 Tcf7l2 protein_coding protein_coding MGP_CBAJ_T0051798.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60230499 60445347 + MGP_CBAJ_P0051798 Tcf7l2 protein_coding protein_coding MGP_CBAJ_T0051799.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60405481 60432717 + Tcf7l2 protein_coding processed_transcript MGP_CBAJ_T0051800.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60406663 60432065 + MGP_CBAJ_P0051800 Tcf7l2 protein_coding protein_coding MGP_CBAJ_T0051801.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60407639 60446367 + MGP_CBAJ_P0051801 Tcf7l2 protein_coding protein_coding MGP_CBAJ_T0051802.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60407791 60424781 + Tcf7l2 protein_coding processed_transcript MGP_CBAJ_T0051803.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60410443 60432140 + Tcf7l2 protein_coding processed_transcript MGP_CBAJ_T0051804.1 MGP_CBAJ_G0024971.1 mouse_genomes_project 19 60410687 60432703 + MGP_CBAJ_P0051804 Tcf7l2 protein_coding protein_coding MGP_CBAJ_T0050497.1 MGP_CBAJ_G0024491.1 mouse_genomes_project 19 4355915 4372664 - MGP_CBAJ_P0050497 Flrt1 protein_coding protein_coding MGP_CBAJ_T0010197.1 MGP_CBAJ_G0008335.1 mouse_genomes_project 19 51179683 51179819 - Mir8090 miRNA miRNA MGP_CBAJ_T0013202.1 MGP_CBAJ_G0011314.1 mouse_genomes_project 19 14998516 14999496 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0099064.1 MGP_CBAJ_G0037319.1 mouse_genomes_project 19 13269378 13269501 - Gm26026 snRNA snRNA MGP_CBAJ_T0050903.1 MGP_CBAJ_G0024649.1 mouse_genomes_project 19 11719031 11719976 - MGP_CBAJ_P0050903 protein_coding protein_coding MGP_CBAJ_T0051147.1 MGP_CBAJ_G0024744.1 mouse_genomes_project 19 31312378 31316169 - MGP_CBAJ_P0051147 Dkk1 protein_coding protein_coding MGP_CBAJ_T0011346.1 MGP_CBAJ_G0009484.1 mouse_genomes_project 19 3047386 3047508 - Gm28006 misc_RNA misc_RNA MGP_CBAJ_T0050847.1 MGP_CBAJ_G0024608.1 mouse_genomes_project 19 10092088 10093026 - MGP_CBAJ_P0050847 Olfr1427 protein_coding protein_coding MGP_CBAJ_T0013199.1 MGP_CBAJ_G0011311.1 mouse_genomes_project 19 10670422 10671014 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0100333.1 MGP_CBAJ_G0038588.1 mouse_genomes_project 19 51127435 51127551 + Gm26085 snoRNA snoRNA MGP_CBAJ_T0050778.1 MGP_CBAJ_G0024580.1 mouse_genomes_project 19 9041206 9055116 - MGP_CBAJ_P0050778 Ms4a12 protein_coding protein_coding MGP_CBAJ_T0006988.1 MGP_CBAJ_G0005732.1 mouse_genomes_project 19 38896799 38921701 + A330032B11Rik lincRNA lincRNA MGP_CBAJ_T0050489.1 MGP_CBAJ_G0024485.1 mouse_genomes_project 19 4229169 4237347 - MGP_CBAJ_P0050489 Dnajc4 protein_coding protein_coding MGP_CBAJ_T0050461.1 MGP_CBAJ_G0024475.1 mouse_genomes_project 19 4133981 4137729 + MGP_CBAJ_P0050461 Trmt112 protein_coding protein_coding MGP_CBAJ_T0050462.1 MGP_CBAJ_G0024475.1 mouse_genomes_project 19 4134030 4137708 + MGP_CBAJ_P0050462 Trmt112 protein_coding protein_coding MGP_CBAJ_T0050463.1 MGP_CBAJ_G0024475.1 mouse_genomes_project 19 4134436 4137514 + Trmt112 protein_coding retained_intron MGP_CBAJ_T0050464.1 MGP_CBAJ_G0024475.1 mouse_genomes_project 19 4134447 4137708 + MGP_CBAJ_P0050464 Trmt112 protein_coding protein_coding MGP_CBAJ_T0100310.1 MGP_CBAJ_G0038565.1 mouse_genomes_project 19 6225849 6225921 + Gm24452 snoRNA snoRNA MGP_CBAJ_T0050413.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3677506 3693366 + MGP_CBAJ_P0050413 Rasgrp2 protein_coding protein_coding MGP_CBAJ_T0050414.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3677622 3681792 + MGP_CBAJ_P0050414 Rasgrp2 protein_coding protein_coding MGP_CBAJ_T0050415.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3677912 3681644 + MGP_CBAJ_P0050415 Rasgrp2 protein_coding protein_coding MGP_CBAJ_T0050416.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3678030 3680733 + MGP_CBAJ_P0050416 Rasgrp2 protein_coding protein_coding MGP_CBAJ_T0050417.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3678034 3681637 + MGP_CBAJ_P0050417 Rasgrp2 protein_coding protein_coding MGP_CBAJ_T0050418.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3678040 3682496 + MGP_CBAJ_P0050418 Rasgrp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050419.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3678083 3680605 + Rasgrp2 protein_coding processed_transcript MGP_CBAJ_T0050420.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3678279 3681797 + MGP_CBAJ_P0050420 Rasgrp2 protein_coding protein_coding MGP_CBAJ_T0050421.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3678693 3680589 + Rasgrp2 protein_coding processed_transcript MGP_CBAJ_T0050422.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3678699 3693361 + MGP_CBAJ_P0050422 Rasgrp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050423.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3678713 3682580 + MGP_CBAJ_P0050423 Rasgrp2 protein_coding protein_coding MGP_CBAJ_T0050424.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3678728 3693372 + MGP_CBAJ_P0050424 Rasgrp2 protein_coding protein_coding MGP_CBAJ_T0050425.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3678730 3682984 + MGP_CBAJ_P0050425 Rasgrp2 protein_coding protein_coding MGP_CBAJ_T0050426.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3678749 3693371 + MGP_CBAJ_P0050426 Rasgrp2 protein_coding protein_coding MGP_CBAJ_T0050427.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3678789 3681771 + MGP_CBAJ_P0050427 Rasgrp2 protein_coding protein_coding MGP_CBAJ_T0050428.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3679853 3680605 + Rasgrp2 protein_coding processed_transcript MGP_CBAJ_T0050429.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3679860 3681797 + MGP_CBAJ_P0050429 Rasgrp2 protein_coding protein_coding MGP_CBAJ_T0050430.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3679876 3681797 + MGP_CBAJ_P0050430 Rasgrp2 protein_coding protein_coding MGP_CBAJ_T0050431.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3679877 3681797 + Rasgrp2 protein_coding processed_transcript MGP_CBAJ_T0050432.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3681076 3683131 + Rasgrp2 protein_coding retained_intron MGP_CBAJ_T0050433.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3682741 3685221 + Rasgrp2 protein_coding retained_intron MGP_CBAJ_T0050434.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3682900 3687828 + Rasgrp2 protein_coding retained_intron MGP_CBAJ_T0050435.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3682986 3692201 + Rasgrp2 protein_coding retained_intron MGP_CBAJ_T0050436.1 MGP_CBAJ_G0024469.1 mouse_genomes_project 19 3686564 3693367 + Rasgrp2 protein_coding processed_transcript MGP_CBAJ_T0050133.1 MGP_CBAJ_G0024392.1 mouse_genomes_project 19 2105364 2113856 + MGP_CBAJ_P0050133 Brms1 protein_coding protein_coding MGP_CBAJ_T0013192.1 MGP_CBAJ_G0011304.1 mouse_genomes_project 19 4992159 4992666 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0050767.1 MGP_CBAJ_G0024575.1 mouse_genomes_project 19 8799237 8823740 - MGP_CBAJ_P0050767 Ms4a18 protein_coding protein_coding MGP_CBAJ_T0050794.1 MGP_CBAJ_G0024585.1 mouse_genomes_project 19 9215391 9242435 + MGP_CBAJ_P0050794 Ms4a4a protein_coding protein_coding MGP_CBAJ_T0051213.1 MGP_CBAJ_G0024773.1 mouse_genomes_project 19 35954389 35969498 - MGP_CBAJ_P0051213 Ifit1bl2 protein_coding protein_coding MGP_CBAJ_T0051214.1 MGP_CBAJ_G0024773.1 mouse_genomes_project 19 35954391 35982825 - MGP_CBAJ_P0051214 Ifit1bl2 protein_coding protein_coding MGP_CBAJ_T0051772.1 MGP_CBAJ_G0024965.1 mouse_genomes_project 19 59485968 59523593 - MGP_CBAJ_P0051772 Gpam protein_coding unknown_likely_coding MGP_CBAJ_T0003775.1 MGP_CBAJ_G0003382.1 mouse_genomes_project 19 3632282 3640294 - Gm14966 antisense antisense MGP_CBAJ_T0003776.1 MGP_CBAJ_G0003382.1 mouse_genomes_project 19 3632358 3640518 - Gm14966 antisense antisense MGP_CBAJ_T0050657.1 MGP_CBAJ_G0024533.1 mouse_genomes_project 19 6485952 6496040 + MGP_CBAJ_P0050657 Mta2 protein_coding protein_coding MGP_CBAJ_T0050658.1 MGP_CBAJ_G0024533.1 mouse_genomes_project 19 6486570 6489943 + Mta2 protein_coding processed_transcript MGP_CBAJ_T0050659.1 MGP_CBAJ_G0024533.1 mouse_genomes_project 19 6486583 6490797 + Mta2 protein_coding processed_transcript MGP_CBAJ_T0050660.1 MGP_CBAJ_G0024533.1 mouse_genomes_project 19 6488110 6491192 + Mta2 protein_coding retained_intron MGP_CBAJ_T0050661.1 MGP_CBAJ_G0024533.1 mouse_genomes_project 19 6489164 6490818 + Mta2 protein_coding processed_transcript MGP_CBAJ_T0050662.1 MGP_CBAJ_G0024533.1 mouse_genomes_project 19 6490469 6491754 + Mta2 protein_coding retained_intron MGP_CBAJ_T0051526.1 MGP_CBAJ_G0024882.1 mouse_genomes_project 19 47342769 47363317 + MGP_CBAJ_P0051526 Wnt8b protein_coding protein_coding MGP_CBAJ_T0051207.1 MGP_CBAJ_G0024769.1 mouse_genomes_project 19 35867363 35897135 + MGP_CBAJ_P0051207 Ifit2 protein_coding protein_coding MGP_CBAJ_T0051208.1 MGP_CBAJ_G0024769.1 mouse_genomes_project 19 35867379 35900362 + MGP_CBAJ_P0051208 Ifit2 protein_coding protein_coding MGP_CBAJ_T0050946.1 MGP_CBAJ_G0024677.1 mouse_genomes_project 19 16374090 16824411 - MGP_CBAJ_P0050946 Pcsk5 protein_coding protein_coding MGP_CBAJ_T0050947.1 MGP_CBAJ_G0024677.1 mouse_genomes_project 19 16374681 16478318 - MGP_CBAJ_P0050947 Pcsk5 protein_coding unknown_likely_coding MGP_CBAJ_T0050948.1 MGP_CBAJ_G0024677.1 mouse_genomes_project 19 16513399 16823930 - MGP_CBAJ_P0050948 Pcsk5 protein_coding protein_coding MGP_CBAJ_T0050854.1 MGP_CBAJ_G0024615.1 mouse_genomes_project 19 10476789 10477737 + MGP_CBAJ_P0050854 Olfr1440 protein_coding protein_coding MGP_CBAJ_T0051507.1 MGP_CBAJ_G0024874.1 mouse_genomes_project 19 46811149 46849713 - MGP_CBAJ_P0051507 Chuk protein_coding protein_coding MGP_CBAJ_T0051508.1 MGP_CBAJ_G0024874.1 mouse_genomes_project 19 46811150 46849710 - MGP_CBAJ_P0051508 Chuk protein_coding protein_coding MGP_CBAJ_T0051509.1 MGP_CBAJ_G0024874.1 mouse_genomes_project 19 46812187 46813719 - Chuk protein_coding retained_intron MGP_CBAJ_T0051510.1 MGP_CBAJ_G0024874.1 mouse_genomes_project 19 46814752 46817206 - Chuk protein_coding retained_intron MGP_CBAJ_T0051511.1 MGP_CBAJ_G0024874.1 mouse_genomes_project 19 46815427 46822538 - Chuk protein_coding retained_intron MGP_CBAJ_T0051512.1 MGP_CBAJ_G0024874.1 mouse_genomes_project 19 46816460 46817453 - Chuk protein_coding retained_intron MGP_CBAJ_T0051513.1 MGP_CBAJ_G0024874.1 mouse_genomes_project 19 46819569 46849702 - Chuk protein_coding retained_intron MGP_CBAJ_T0051514.1 MGP_CBAJ_G0024874.1 mouse_genomes_project 19 46837373 46849515 - Chuk protein_coding retained_intron MGP_CBAJ_T0051299.1 MGP_CBAJ_G0024802.1 mouse_genomes_project 19 40311586 40326651 + MGP_CBAJ_P0051299 Slc35g1 protein_coding protein_coding MGP_CBAJ_T0051547.1 MGP_CBAJ_G0024889.1 mouse_genomes_project 19 47931588 47949806 + MGP_CBAJ_P0051547 Sema4g protein_coding protein_coding MGP_CBAJ_T0051548.1 MGP_CBAJ_G0024889.1 mouse_genomes_project 19 47931733 47949811 + MGP_CBAJ_P0051548 Sema4g protein_coding unknown_likely_coding MGP_CBAJ_T0051549.1 MGP_CBAJ_G0024889.1 mouse_genomes_project 19 47931778 47949806 + MGP_CBAJ_P0051549 Sema4g protein_coding nonsense_mediated_decay MGP_CBAJ_T0051550.1 MGP_CBAJ_G0024889.1 mouse_genomes_project 19 47934637 47949803 + MGP_CBAJ_P0051550 Sema4g protein_coding protein_coding MGP_CBAJ_T0006978.1 MGP_CBAJ_G0005726.1 mouse_genomes_project 19 29160159 29209894 + D930032P07Rik lincRNA lincRNA MGP_CBAJ_T0006979.1 MGP_CBAJ_G0005726.1 mouse_genomes_project 19 29160163 29209619 + D930032P07Rik lincRNA lincRNA MGP_CBAJ_T0003768.1 MGP_CBAJ_G0003379.1 mouse_genomes_project 19 2533480 2544240 + 4930481A15Rik antisense antisense MGP_CBAJ_T0003769.1 MGP_CBAJ_G0003379.1 mouse_genomes_project 19 2533480 2544137 + 4930481A15Rik antisense antisense MGP_CBAJ_T0003770.1 MGP_CBAJ_G0003379.1 mouse_genomes_project 19 2533480 2544144 + 4930481A15Rik antisense antisense MGP_CBAJ_T0003771.1 MGP_CBAJ_G0003379.1 mouse_genomes_project 19 2533526 2549405 + 4930481A15Rik antisense antisense MGP_CBAJ_T0050160.1 MGP_CBAJ_G0024406.1 mouse_genomes_project 19 2483508 2485517 - MGP_CBAJ_P0050160 Banf1 protein_coding protein_coding MGP_CBAJ_T0050161.1 MGP_CBAJ_G0024406.1 mouse_genomes_project 19 2483508 2485219 - MGP_CBAJ_P0050161 Banf1 protein_coding protein_coding MGP_CBAJ_T0050931.1 MGP_CBAJ_G0024670.1 mouse_genomes_project 19 14840099 15124234 + MGP_CBAJ_P0050931 Gnaq protein_coding protein_coding MGP_CBAJ_T0050932.1 MGP_CBAJ_G0024670.1 mouse_genomes_project 19 14840564 15046970 + Gnaq protein_coding retained_intron MGP_CBAJ_T0050933.1 MGP_CBAJ_G0024670.1 mouse_genomes_project 19 14935105 15047717 + Gnaq protein_coding processed_transcript MGP_CBAJ_T0050269.1 MGP_CBAJ_G0024442.1 mouse_genomes_project 19 3217920 3246577 - MGP_CBAJ_P0050269 Capn1 protein_coding protein_coding MGP_CBAJ_T0050270.1 MGP_CBAJ_G0024442.1 mouse_genomes_project 19 3217920 3245999 - MGP_CBAJ_P0050270 Capn1 protein_coding protein_coding MGP_CBAJ_T0050503.1 MGP_CBAJ_G0024493.1 mouse_genomes_project 19 4497209 4499698 - MGP_CBAJ_P0050503 Cox8a protein_coding protein_coding MGP_CBAJ_T0051217.1 MGP_CBAJ_G0024776.1 mouse_genomes_project 19 36176861 36267368 - MGP_CBAJ_P0051217 Pank1 protein_coding protein_coding MGP_CBAJ_T0051218.1 MGP_CBAJ_G0024776.1 mouse_genomes_project 19 36176862 36265830 - MGP_CBAJ_P0051218 Pank1 protein_coding protein_coding MGP_CBAJ_T0051388.1 MGP_CBAJ_G0024837.1 mouse_genomes_project 19 43990508 44151832 - MGP_CBAJ_P0051388 Slit1 protein_coding protein_coding MGP_CBAJ_T0051389.1 MGP_CBAJ_G0024837.1 mouse_genomes_project 19 43990510 44152005 - MGP_CBAJ_P0051389 Slit1 protein_coding protein_coding MGP_CBAJ_T0051390.1 MGP_CBAJ_G0024837.1 mouse_genomes_project 19 43990702 44151832 - MGP_CBAJ_P0051390 Slit1 protein_coding protein_coding MGP_CBAJ_T0051391.1 MGP_CBAJ_G0024837.1 mouse_genomes_project 19 43997284 44005922 - Slit1 protein_coding retained_intron MGP_CBAJ_T0051392.1 MGP_CBAJ_G0024837.1 mouse_genomes_project 19 44045439 44151826 - MGP_CBAJ_P0051392 Slit1 protein_coding protein_coding MGP_CBAJ_T0050906.1 MGP_CBAJ_G0024652.1 mouse_genomes_project 19 11762835 11763780 - MGP_CBAJ_P0050906 protein_coding protein_coding MGP_CBAJ_T0050605.1 MGP_CBAJ_G0024516.1 mouse_genomes_project 19 6288684 6290631 - MGP_CBAJ_P0050605 Taf6l protein_coding protein_coding MGP_CBAJ_T0050606.1 MGP_CBAJ_G0024516.1 mouse_genomes_project 19 6290517 6302251 - MGP_CBAJ_P0050606 Taf6l protein_coding protein_coding MGP_CBAJ_T0050607.1 MGP_CBAJ_G0024516.1 mouse_genomes_project 19 6290650 6293126 - Taf6l protein_coding retained_intron MGP_CBAJ_T0050608.1 MGP_CBAJ_G0024516.1 mouse_genomes_project 19 6290655 6302192 - MGP_CBAJ_P0050608 Taf6l protein_coding protein_coding MGP_CBAJ_T0050609.1 MGP_CBAJ_G0024516.1 mouse_genomes_project 19 6290657 6302251 - MGP_CBAJ_P0050609 Taf6l protein_coding protein_coding MGP_CBAJ_T0050610.1 MGP_CBAJ_G0024516.1 mouse_genomes_project 19 6290659 6302352 - MGP_CBAJ_P0050610 Taf6l protein_coding protein_coding MGP_CBAJ_T0050611.1 MGP_CBAJ_G0024516.1 mouse_genomes_project 19 6290692 6299934 - MGP_CBAJ_P0050611 Taf6l protein_coding protein_coding MGP_CBAJ_T0050612.1 MGP_CBAJ_G0024516.1 mouse_genomes_project 19 6290692 6299934 - MGP_CBAJ_P0050612 Taf6l protein_coding protein_coding MGP_CBAJ_T0050613.1 MGP_CBAJ_G0024516.1 mouse_genomes_project 19 6291600 6295216 - Taf6l protein_coding retained_intron MGP_CBAJ_T0050614.1 MGP_CBAJ_G0024516.1 mouse_genomes_project 19 6294080 6302216 - Taf6l protein_coding retained_intron MGP_CBAJ_T0050615.1 MGP_CBAJ_G0024516.1 mouse_genomes_project 19 6294716 6298258 - Taf6l protein_coding processed_transcript MGP_CBAJ_T0050616.1 MGP_CBAJ_G0024516.1 mouse_genomes_project 19 6294742 6298612 - Taf6l protein_coding retained_intron MGP_CBAJ_T0050617.1 MGP_CBAJ_G0024516.1 mouse_genomes_project 19 6297745 6302200 - Taf6l protein_coding retained_intron MGP_CBAJ_T0051096.1 MGP_CBAJ_G0024729.1 mouse_genomes_project 19 29887659 29894129 - MGP_CBAJ_P0051096 Insl6 protein_coding protein_coding MGP_CBAJ_T0051841.1 MGP_CBAJ_G0024982.1 mouse_genomes_project 19 61581968 61682634 - MGP_CBAJ_P0051841 Afap1l2 protein_coding protein_coding MGP_CBAJ_T0051842.1 MGP_CBAJ_G0024982.1 mouse_genomes_project 19 61581968 61682604 - MGP_CBAJ_P0051842 Afap1l2 protein_coding protein_coding MGP_CBAJ_T0051843.1 MGP_CBAJ_G0024982.1 mouse_genomes_project 19 61581968 61682616 - MGP_CBAJ_P0051843 Afap1l2 protein_coding protein_coding MGP_CBAJ_T0051844.1 MGP_CBAJ_G0024982.1 mouse_genomes_project 19 61582989 61682572 - MGP_CBAJ_P0051844 Afap1l2 protein_coding unknown_likely_coding MGP_CBAJ_T0051845.1 MGP_CBAJ_G0024982.1 mouse_genomes_project 19 61590004 61598156 - Afap1l2 protein_coding retained_intron MGP_CBAJ_T0051846.1 MGP_CBAJ_G0024982.1 mouse_genomes_project 19 61593142 61682634 - MGP_CBAJ_P0051846 Afap1l2 protein_coding protein_coding MGP_CBAJ_T0051847.1 MGP_CBAJ_G0024982.1 mouse_genomes_project 19 61599664 61675455 - MGP_CBAJ_P0051847 Afap1l2 protein_coding protein_coding MGP_CBAJ_T0051848.1 MGP_CBAJ_G0024982.1 mouse_genomes_project 19 61614763 61682614 - Afap1l2 protein_coding retained_intron MGP_CBAJ_T0000980.1 MGP_CBAJ_G0000912.1 mouse_genomes_project 19 1781047 1784116 - TEC TEC MGP_CBAJ_T0098193.1 MGP_CBAJ_G0036466.1 mouse_genomes_project 19 9591948 9592024 + Gm25443 scaRNA scaRNA MGP_CBAJ_T0100321.1 MGP_CBAJ_G0038576.1 mouse_genomes_project 19 19348350 19348482 - Gm22684 snoRNA snoRNA MGP_CBAJ_T0050008.1 MGP_CBAJ_G0024352.1 mouse_genomes_project 19 1043437 1057734 - MGP_CBAJ_P0050008 Aip protein_coding protein_coding MGP_CBAJ_T0050009.1 MGP_CBAJ_G0024352.1 mouse_genomes_project 19 1043455 1050398 - MGP_CBAJ_P0050009 Aip protein_coding protein_coding MGP_CBAJ_T0050010.1 MGP_CBAJ_G0024352.1 mouse_genomes_project 19 1044438 1057724 - MGP_CBAJ_P0050010 Aip protein_coding protein_coding MGP_CBAJ_T0050011.1 MGP_CBAJ_G0024352.1 mouse_genomes_project 19 1047247 1053387 - Aip protein_coding processed_transcript MGP_CBAJ_T0050012.1 MGP_CBAJ_G0024352.1 mouse_genomes_project 19 1049755 1057666 - Aip protein_coding retained_intron MGP_CBAJ_T0051075.1 MGP_CBAJ_G0024722.1 mouse_genomes_project 19 29345676 29393529 + Slc1a1 protein_coding retained_intron MGP_CBAJ_T0051076.1 MGP_CBAJ_G0024722.1 mouse_genomes_project 19 29345701 29434079 + MGP_CBAJ_P0051076 Slc1a1 protein_coding protein_coding MGP_CBAJ_T0051077.1 MGP_CBAJ_G0024722.1 mouse_genomes_project 19 29345762 29426107 + Slc1a1 protein_coding retained_intron MGP_CBAJ_T0051078.1 MGP_CBAJ_G0024722.1 mouse_genomes_project 19 29408279 29431996 + Slc1a1 protein_coding retained_intron MGP_CBAJ_T0051080.1 MGP_CBAJ_G0024722.1 mouse_genomes_project 19 29411044 29432757 + Slc1a1 protein_coding retained_intron MGP_CBAJ_T0051899.1 MGP_CBAJ_G0024999.1 mouse_genomes_project 19 64248973 64298871 - MGP_CBAJ_P0051899 Pdzd8 protein_coding protein_coding MGP_CBAJ_T0099060.1 MGP_CBAJ_G0037315.1 mouse_genomes_project 19 1949293 1949403 + Gm25334 snRNA snRNA MGP_CBAJ_T0050758.1 MGP_CBAJ_G0024572.1 mouse_genomes_project 19 8743824 8751552 - Ccdc86 protein_coding processed_transcript MGP_CBAJ_T0050759.1 MGP_CBAJ_G0024572.1 mouse_genomes_project 19 8743824 8753366 - MGP_CBAJ_P0050759 Ccdc86 protein_coding protein_coding MGP_CBAJ_T0050760.1 MGP_CBAJ_G0024572.1 mouse_genomes_project 19 8747850 8753351 - Ccdc86 protein_coding retained_intron MGP_CBAJ_T0051211.1 MGP_CBAJ_G0024771.1 mouse_genomes_project 19 35948652 35950320 + MGP_CBAJ_P0051211 Ifit3b protein_coding protein_coding MGP_CBAJ_T0007004.1 MGP_CBAJ_G0005744.1 mouse_genomes_project 19 54467285 54589561 + Gm26629 lincRNA lincRNA MGP_CBAJ_T0051252.1 MGP_CBAJ_G0024787.1 mouse_genomes_project 19 38731497 38935156 - MGP_CBAJ_P0051252 Cpeb3 protein_coding protein_coding MGP_CBAJ_T0051253.1 MGP_CBAJ_G0024787.1 mouse_genomes_project 19 38731503 38897052 - MGP_CBAJ_P0051253 Cpeb3 protein_coding protein_coding MGP_CBAJ_T0051254.1 MGP_CBAJ_G0024787.1 mouse_genomes_project 19 38732085 38899020 - MGP_CBAJ_P0051254 Cpeb3 protein_coding protein_coding MGP_CBAJ_T0051255.1 MGP_CBAJ_G0024787.1 mouse_genomes_project 19 38732085 38935156 - MGP_CBAJ_P0051255 Cpeb3 protein_coding protein_coding MGP_CBAJ_T0051256.1 MGP_CBAJ_G0024787.1 mouse_genomes_project 19 38733176 38935167 - MGP_CBAJ_P0051256 Cpeb3 protein_coding protein_coding MGP_CBAJ_T0051257.1 MGP_CBAJ_G0024787.1 mouse_genomes_project 19 38734139 38934987 - MGP_CBAJ_P0051257 Cpeb3 protein_coding protein_coding MGP_CBAJ_T0051258.1 MGP_CBAJ_G0024787.1 mouse_genomes_project 19 38734843 38923269 - MGP_CBAJ_P0051258 Cpeb3 protein_coding protein_coding MGP_CBAJ_T0051259.1 MGP_CBAJ_G0024787.1 mouse_genomes_project 19 38764057 38935202 - MGP_CBAJ_P0051259 Cpeb3 protein_coding protein_coding MGP_CBAJ_T0051260.1 MGP_CBAJ_G0024787.1 mouse_genomes_project 19 38897393 38900975 - MGP_CBAJ_P0051260 Cpeb3 protein_coding protein_coding MGP_CBAJ_T0051261.1 MGP_CBAJ_G0024787.1 mouse_genomes_project 19 38897549 38899013 - MGP_CBAJ_P0051261 Cpeb3 protein_coding protein_coding MGP_CBAJ_T0051262.1 MGP_CBAJ_G0024787.1 mouse_genomes_project 19 38897579 38936295 - MGP_CBAJ_P0051262 Cpeb3 protein_coding protein_coding MGP_CBAJ_T0051263.1 MGP_CBAJ_G0024787.1 mouse_genomes_project 19 38897644 38898173 - MGP_CBAJ_P0051263 Cpeb3 protein_coding protein_coding MGP_CBAJ_T0051221.1 MGP_CBAJ_G0024778.1 mouse_genomes_project 19 37502673 37620703 - MGP_CBAJ_P0051221 Htr7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051222.1 MGP_CBAJ_G0024778.1 mouse_genomes_project 19 37502673 37620703 - MGP_CBAJ_P0051222 Htr7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051223.1 MGP_CBAJ_G0024778.1 mouse_genomes_project 19 37502673 37620683 - MGP_CBAJ_P0051223 Htr7 protein_coding protein_coding MGP_CBAJ_T0051224.1 MGP_CBAJ_G0024778.1 mouse_genomes_project 19 37502684 37620711 - MGP_CBAJ_P0051224 Htr7 protein_coding protein_coding MGP_CBAJ_T0051225.1 MGP_CBAJ_G0024778.1 mouse_genomes_project 19 37503759 37620850 - MGP_CBAJ_P0051225 Htr7 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051226.1 MGP_CBAJ_G0024778.1 mouse_genomes_project 19 37504254 37620716 - MGP_CBAJ_P0051226 Htr7 protein_coding protein_coding MGP_CBAJ_T0003801.1 MGP_CBAJ_G0003400.1 mouse_genomes_project 19 51018703 51030753 - Gm16068 antisense antisense MGP_CBAJ_T0050176.1 MGP_CBAJ_G0024414.1 mouse_genomes_project 19 2594828 2599275 + MGP_CBAJ_P0050176 Fibp protein_coding protein_coding MGP_CBAJ_T0050177.1 MGP_CBAJ_G0024414.1 mouse_genomes_project 19 2594915 2599280 + MGP_CBAJ_P0050177 Fibp protein_coding unknown_likely_coding MGP_CBAJ_T0051654.1 MGP_CBAJ_G0024918.1 mouse_genomes_project 19 49547740 49568746 + MGP_CBAJ_P0051654 Mfsd13a protein_coding nonsense_mediated_decay MGP_CBAJ_T0051655.1 MGP_CBAJ_G0024918.1 mouse_genomes_project 19 49556804 49568756 + MGP_CBAJ_P0051655 Mfsd13a protein_coding protein_coding MGP_CBAJ_T0051656.1 MGP_CBAJ_G0024918.1 mouse_genomes_project 19 49560240 49568746 + Mfsd13a protein_coding retained_intron MGP_CBAJ_T0050593.1 MGP_CBAJ_G0024515.1 mouse_genomes_project 19 6270147 6283987 + MGP_CBAJ_P0050593 Nxf1 protein_coding protein_coding MGP_CBAJ_T0050594.1 MGP_CBAJ_G0024515.1 mouse_genomes_project 19 6270181 6288619 + MGP_CBAJ_P0050594 Nxf1 protein_coding protein_coding MGP_CBAJ_T0050595.1 MGP_CBAJ_G0024515.1 mouse_genomes_project 19 6270193 6280683 + Nxf1 protein_coding processed_transcript MGP_CBAJ_T0050596.1 MGP_CBAJ_G0024515.1 mouse_genomes_project 19 6270224 6278361 + MGP_CBAJ_P0050596 Nxf1 protein_coding protein_coding MGP_CBAJ_T0050597.1 MGP_CBAJ_G0024515.1 mouse_genomes_project 19 6270224 6276810 + MGP_CBAJ_P0050597 Nxf1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050598.1 MGP_CBAJ_G0024515.1 mouse_genomes_project 19 6278003 6280466 + MGP_CBAJ_P0050598 Nxf1 protein_coding protein_coding MGP_CBAJ_T0050599.1 MGP_CBAJ_G0024515.1 mouse_genomes_project 19 6279582 6288623 + MGP_CBAJ_P0050599 Nxf1 protein_coding unknown_likely_coding MGP_CBAJ_T0050600.1 MGP_CBAJ_G0024515.1 mouse_genomes_project 19 6279746 6282237 + Nxf1 protein_coding retained_intron MGP_CBAJ_T0050601.1 MGP_CBAJ_G0024515.1 mouse_genomes_project 19 6280080 6280957 + Nxf1 protein_coding retained_intron MGP_CBAJ_T0050602.1 MGP_CBAJ_G0024515.1 mouse_genomes_project 19 6281704 6283914 + MGP_CBAJ_P0050602 Nxf1 protein_coding protein_coding MGP_CBAJ_T0050603.1 MGP_CBAJ_G0024515.1 mouse_genomes_project 19 6283156 6283986 + Nxf1 protein_coding processed_transcript MGP_CBAJ_T0050604.1 MGP_CBAJ_G0024515.1 mouse_genomes_project 19 6283200 6283927 + Nxf1 protein_coding retained_intron MGP_CBAJ_T0098010.1 MGP_CBAJ_G0036283.1 mouse_genomes_project 19 51737204 51737315 - Gm23857 rRNA rRNA MGP_CBAJ_T0051289.1 MGP_CBAJ_G0024800.1 mouse_genomes_project 19 40066338 40105549 - MGP_CBAJ_P0051289 Fra10ac1 protein_coding protein_coding MGP_CBAJ_T0101287.1 MGP_CBAJ_G0039406.1 mouse_genomes_project 19 41301186 41354425 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0101288.1 MGP_CBAJ_G0039406.1 mouse_genomes_project 19 41301216 41354382 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_CBAJ_T0101289.1 MGP_CBAJ_G0039406.1 mouse_genomes_project 19 41351169 41354673 + transcribed_unprocessed_pseudogene processed_transcript MGP_CBAJ_T0017466.1 MGP_CBAJ_G0015130.1 mouse_genomes_project 19 45307354 45313910 + processed_transcript processed_transcript MGP_CBAJ_T0017467.1 MGP_CBAJ_G0015130.1 mouse_genomes_project 19 45307432 45308586 + processed_transcript processed_transcript MGP_CBAJ_T0050935.1 MGP_CBAJ_G0024672.1 mouse_genomes_project 19 15400438 15607480 - MGP_CBAJ_P0050935 Vps13a protein_coding protein_coding MGP_CBAJ_T0050936.1 MGP_CBAJ_G0024672.1 mouse_genomes_project 19 15418694 15607427 - MGP_CBAJ_P0050936 Vps13a protein_coding unknown_likely_coding MGP_CBAJ_T0051894.1 MGP_CBAJ_G0024995.1 mouse_genomes_project 19 63886610 63990642 - MGP_CBAJ_P0051894 Shtn1 protein_coding protein_coding MGP_CBAJ_T0051089.1 MGP_CBAJ_G0024725.1 mouse_genomes_project 19 29512505 29542796 + MGP_CBAJ_P0051089 Cdc37l1 protein_coding protein_coding MGP_CBAJ_T0051090.1 MGP_CBAJ_G0024725.1 mouse_genomes_project 19 29512549 29538029 + MGP_CBAJ_P0051090 Cdc37l1 protein_coding unknown_likely_coding MGP_CBAJ_T0050938.1 MGP_CBAJ_G0024674.1 mouse_genomes_project 19 15796073 16122095 + MGP_CBAJ_P0050938 Prune2 protein_coding protein_coding MGP_CBAJ_T0050939.1 MGP_CBAJ_G0024674.1 mouse_genomes_project 19 16024138 16122104 + MGP_CBAJ_P0050939 Prune2 protein_coding unknown_likely_coding MGP_CBAJ_T0051129.1 MGP_CBAJ_G0024738.1 mouse_genomes_project 19 30426016 30430591 - MGP_CBAJ_P0051129 Ranbp6 protein_coding protein_coding MGP_CBAJ_T0051031.1 MGP_CBAJ_G0024714.1 mouse_genomes_project 19 25788471 25794992 + MGP_CBAJ_P0051031 Dmrt2 protein_coding protein_coding MGP_CBAJ_T0050943.1 MGP_CBAJ_G0024676.1 mouse_genomes_project 19 16326104 16334466 + MGP_CBAJ_P0050943 Rfk protein_coding protein_coding MGP_CBAJ_T0050944.1 MGP_CBAJ_G0024676.1 mouse_genomes_project 19 16326629 16332939 + Rfk protein_coding processed_transcript MGP_CBAJ_T0050945.1 MGP_CBAJ_G0024676.1 mouse_genomes_project 19 16329473 16333048 + Rfk protein_coding processed_transcript MGP_CBAJ_T0006993.1 MGP_CBAJ_G0005736.1 mouse_genomes_project 19 46265771 46267323 - Gm20467 lincRNA lincRNA MGP_CBAJ_T0051476.1 MGP_CBAJ_G0024866.1 mouse_genomes_project 19 46354414 46410205 + MGP_CBAJ_P0051476 Entpd7 protein_coding protein_coding MGP_CBAJ_T0051477.1 MGP_CBAJ_G0024866.1 mouse_genomes_project 19 46354551 46359866 + Entpd7 protein_coding retained_intron MGP_CBAJ_T0051478.1 MGP_CBAJ_G0024866.1 mouse_genomes_project 19 46354582 46399155 + Entpd7 protein_coding retained_intron MGP_CBAJ_T0051479.1 MGP_CBAJ_G0024866.1 mouse_genomes_project 19 46381024 46385553 + Entpd7 protein_coding retained_intron MGP_CBAJ_T0051480.1 MGP_CBAJ_G0024866.1 mouse_genomes_project 19 46402906 46404673 + Entpd7 protein_coding retained_intron MGP_CBAJ_T0051497.1 MGP_CBAJ_G0024872.1 mouse_genomes_project 19 46721663 46762747 - MGP_CBAJ_P0051497 Cyp2c44 protein_coding protein_coding MGP_CBAJ_T0100326.1 MGP_CBAJ_G0038581.1 mouse_genomes_project 19 28095267 28095399 - Gm24782 snoRNA snoRNA MGP_CBAJ_T0017456.1 MGP_CBAJ_G0015127.1 mouse_genomes_project 19 27035786 27103698 - 4931403E22Rik processed_transcript processed_transcript MGP_CBAJ_T0051694.1 MGP_CBAJ_G0024939.1 mouse_genomes_project 19 50528611 50626093 + MGP_CBAJ_P0051694 Neurl1a protein_coding protein_coding MGP_CBAJ_T0051695.1 MGP_CBAJ_G0024939.1 mouse_genomes_project 19 50595476 50626093 + MGP_CBAJ_P0051695 Neurl1a protein_coding protein_coding MGP_CBAJ_T0050437.1 MGP_CBAJ_G0024470.1 mouse_genomes_project 19 3696887 3844975 + MGP_CBAJ_P0050437 Nrxn2 protein_coding protein_coding MGP_CBAJ_T0050438.1 MGP_CBAJ_G0024470.1 mouse_genomes_project 19 3696894 3760153 + Nrxn2 protein_coding retained_intron MGP_CBAJ_T0050439.1 MGP_CBAJ_G0024470.1 mouse_genomes_project 19 3696894 3844974 + MGP_CBAJ_P0050439 Nrxn2 protein_coding protein_coding MGP_CBAJ_T0050440.1 MGP_CBAJ_G0024470.1 mouse_genomes_project 19 3696921 3844036 + MGP_CBAJ_P0050440 Nrxn2 protein_coding protein_coding MGP_CBAJ_T0050441.1 MGP_CBAJ_G0024470.1 mouse_genomes_project 19 3709445 3844975 + MGP_CBAJ_P0050441 Nrxn2 protein_coding protein_coding MGP_CBAJ_T0050442.1 MGP_CBAJ_G0024470.1 mouse_genomes_project 19 3710154 3770804 + MGP_CBAJ_P0050442 Nrxn2 protein_coding protein_coding MGP_CBAJ_T0050443.1 MGP_CBAJ_G0024470.1 mouse_genomes_project 19 3710275 3771763 + MGP_CBAJ_P0050443 Nrxn2 protein_coding protein_coding MGP_CBAJ_T0050444.1 MGP_CBAJ_G0024470.1 mouse_genomes_project 19 3734527 3771777 + Nrxn2 protein_coding processed_transcript MGP_CBAJ_T0050445.1 MGP_CBAJ_G0024470.1 mouse_genomes_project 19 3735365 3771875 + Nrxn2 protein_coding processed_transcript MGP_CBAJ_T0050446.1 MGP_CBAJ_G0024470.1 mouse_genomes_project 19 3743638 3781027 + Nrxn2 protein_coding retained_intron MGP_CBAJ_T0050447.1 MGP_CBAJ_G0024470.1 mouse_genomes_project 19 3771532 3781026 + Nrxn2 protein_coding retained_intron MGP_CBAJ_T0050448.1 MGP_CBAJ_G0024470.1 mouse_genomes_project 19 3809758 3821551 + Nrxn2 protein_coding processed_transcript MGP_CBAJ_T0050449.1 MGP_CBAJ_G0024470.1 mouse_genomes_project 19 3809915 3844975 + MGP_CBAJ_P0050449 Nrxn2 protein_coding protein_coding MGP_CBAJ_T0050450.1 MGP_CBAJ_G0024470.1 mouse_genomes_project 19 3809922 3855960 + MGP_CBAJ_P0050450 Nrxn2 protein_coding protein_coding MGP_CBAJ_T0050451.1 MGP_CBAJ_G0024470.1 mouse_genomes_project 19 3828921 3844054 + Nrxn2 protein_coding processed_transcript MGP_CBAJ_T0051402.1 MGP_CBAJ_G0024843.1 mouse_genomes_project 19 44373830 44387539 + MGP_CBAJ_P0051402 Zdhhc16 protein_coding protein_coding MGP_CBAJ_T0051403.1 MGP_CBAJ_G0024843.1 mouse_genomes_project 19 44373907 44387547 + MGP_CBAJ_P0051403 Zdhhc16 protein_coding unknown_likely_coding MGP_CBAJ_T0051156.1 MGP_CBAJ_G0024747.1 mouse_genomes_project 19 32771577 32863197 + MGP_CBAJ_P0051156 A1cf protein_coding protein_coding MGP_CBAJ_T0051157.1 MGP_CBAJ_G0024747.1 mouse_genomes_project 19 32798533 32861303 + MGP_CBAJ_P0051157 A1cf protein_coding unknown_likely_coding MGP_CBAJ_T0051685.1 MGP_CBAJ_G0024931.1 mouse_genomes_project 19 50357963 50381129 - MGP_CBAJ_P0051685 Pcgf6 protein_coding protein_coding MGP_CBAJ_T0051006.1 MGP_CBAJ_G0024699.1 mouse_genomes_project 19 23541430 23575190 + MGP_CBAJ_P0051006 Ptar1 protein_coding protein_coding MGP_CBAJ_T0006959.1 MGP_CBAJ_G0005712.1 mouse_genomes_project 19 3027204 3047949 - Neat1 lincRNA lincRNA MGP_CBAJ_T0006960.1 MGP_CBAJ_G0005712.1 mouse_genomes_project 19 3044777 3047947 - Neat1 lincRNA lincRNA MGP_CBAJ_T0006961.1 MGP_CBAJ_G0005712.1 mouse_genomes_project 19 3046151 3047730 - Neat1 lincRNA lincRNA MGP_CBAJ_T0051527.1 MGP_CBAJ_G0024883.1 mouse_genomes_project 19 47365974 47401314 - MGP_CBAJ_P0051527 Sec31b protein_coding protein_coding MGP_CBAJ_T0051528.1 MGP_CBAJ_G0024883.1 mouse_genomes_project 19 47366327 47401273 - MGP_CBAJ_P0051528 Sec31b protein_coding protein_coding MGP_CBAJ_T0051529.1 MGP_CBAJ_G0024883.1 mouse_genomes_project 19 47366662 47369607 - MGP_CBAJ_P0051529 Sec31b protein_coding nonsense_mediated_decay MGP_CBAJ_T0051769.1 MGP_CBAJ_G0024963.1 mouse_genomes_project 19 58197443 58299786 + MGP_CBAJ_P0051769 Shoc2 protein_coding protein_coding MGP_CBAJ_T0051770.1 MGP_CBAJ_G0024963.1 mouse_genomes_project 19 58201052 58299786 + MGP_CBAJ_P0051770 Shoc2 protein_coding protein_coding MGP_CBAJ_T0000983.1 MGP_CBAJ_G0000915.1 mouse_genomes_project 19 13199474 13199741 + TEC TEC MGP_CBAJ_T0051688.1 MGP_CBAJ_G0024934.1 mouse_genomes_project 19 50424213 50467619 + MGP_CBAJ_P0051688 Pdcd11 protein_coding protein_coding MGP_CBAJ_T0050816.1 MGP_CBAJ_G0024591.1 mouse_genomes_project 19 9425817 9461675 + MGP_CBAJ_P0050816 Ms4a4d protein_coding protein_coding MGP_CBAJ_T0051664.1 MGP_CBAJ_G0024921.1 mouse_genomes_project 19 49722420 49737169 + MGP_CBAJ_P0051664 Trim8 protein_coding protein_coding MGP_CBAJ_T0050885.1 MGP_CBAJ_G0024631.1 mouse_genomes_project 19 11045264 11046308 - MGP_CBAJ_P0050885 Olfr1446 protein_coding protein_coding MGP_CBAJ_T0050976.1 MGP_CBAJ_G0024688.1 mouse_genomes_project 19 20776843 20784751 + MGP_CBAJ_P0050976 protein_coding unknown_likely_coding MGP_CBAJ_T0050977.1 MGP_CBAJ_G0024688.1 mouse_genomes_project 19 20776866 20784613 + MGP_CBAJ_P0050977 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050978.1 MGP_CBAJ_G0024688.1 mouse_genomes_project 19 20777425 20781218 + MGP_CBAJ_P0050978 protein_coding protein_coding MGP_CBAJ_T0050979.1 MGP_CBAJ_G0024688.1 mouse_genomes_project 19 20780159 20784828 + protein_coding retained_intron MGP_CBAJ_T0050980.1 MGP_CBAJ_G0024688.1 mouse_genomes_project 19 20780219 20786614 + protein_coding retained_intron MGP_CBAJ_T0051267.1 MGP_CBAJ_G0024789.1 mouse_genomes_project 19 39012257 39110704 - MGP_CBAJ_P0051267 Ide protein_coding protein_coding MGP_CBAJ_T0051268.1 MGP_CBAJ_G0024789.1 mouse_genomes_project 19 39013949 39049482 - Ide protein_coding processed_transcript MGP_CBAJ_T0051269.1 MGP_CBAJ_G0024789.1 mouse_genomes_project 19 39024102 39034400 - Ide protein_coding retained_intron MGP_CBAJ_T0051270.1 MGP_CBAJ_G0024789.1 mouse_genomes_project 19 39045436 39055663 - Ide protein_coding processed_transcript MGP_CBAJ_T0051271.1 MGP_CBAJ_G0024789.1 mouse_genomes_project 19 39045740 39081202 - Ide protein_coding retained_intron MGP_CBAJ_T0007011.1 MGP_CBAJ_G0005748.1 mouse_genomes_project 19 60117516 60183879 - lincRNA lincRNA MGP_CBAJ_T0006987.1 MGP_CBAJ_G0005731.1 mouse_genomes_project 19 37363409 37459381 - A830019P07Rik lincRNA lincRNA MGP_CBAJ_T0050456.1 MGP_CBAJ_G0024473.1 mouse_genomes_project 19 4066757 4080346 - MGP_CBAJ_P0050456 Ccdc88b protein_coding protein_coding MGP_CBAJ_T0100331.1 MGP_CBAJ_G0038586.1 mouse_genomes_project 19 46856211 46856357 - Gm24336 snoRNA snoRNA MGP_CBAJ_T0100328.1 MGP_CBAJ_G0038583.1 mouse_genomes_project 19 37275551 37275684 - Gm25611 snoRNA snoRNA MGP_CBAJ_T0050726.1 MGP_CBAJ_G0024563.1 mouse_genomes_project 19 8465036 8476370 + MGP_CBAJ_P0050726 Vps37c protein_coding unknown_likely_coding MGP_CBAJ_T0006971.1 MGP_CBAJ_G0005721.1 mouse_genomes_project 19 22755353 22800266 - C330002G04Rik lincRNA lincRNA MGP_CBAJ_T0050674.1 MGP_CBAJ_G0024540.1 mouse_genomes_project 19 7559183 7590352 - MGP_CBAJ_P0050674 Incenp protein_coding protein_coding MGP_CBAJ_T0007016.1 MGP_CBAJ_G0005753.1 mouse_genomes_project 19 65203480 65221436 + E330013P04Rik lincRNA lincRNA MGP_CBAJ_T0007017.1 MGP_CBAJ_G0005753.1 mouse_genomes_project 19 65203509 65211886 + E330013P04Rik lincRNA lincRNA MGP_CBAJ_T0007018.1 MGP_CBAJ_G0005753.1 mouse_genomes_project 19 65210090 65216143 + E330013P04Rik lincRNA lincRNA MGP_CBAJ_T0050884.1 MGP_CBAJ_G0024630.1 mouse_genomes_project 19 11038201 11039202 + MGP_CBAJ_P0050884 Olfr1445 protein_coding protein_coding MGP_CBAJ_T0050504.1 MGP_CBAJ_G0024494.1 mouse_genomes_project 19 4507399 4522946 - MGP_CBAJ_P0050504 Naa40 protein_coding protein_coding MGP_CBAJ_T0013201.1 MGP_CBAJ_G0011313.1 mouse_genomes_project 19 14618249 14618805 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0013191.1 MGP_CBAJ_G0011303.1 mouse_genomes_project 19 3281350 3281482 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0051125.1 MGP_CBAJ_G0024737.1 mouse_genomes_project 19 30315124 30423464 - MGP_CBAJ_P0051125 9930021J03Rik protein_coding protein_coding MGP_CBAJ_T0051126.1 MGP_CBAJ_G0024737.1 mouse_genomes_project 19 30316035 30364448 - MGP_CBAJ_P0051126 9930021J03Rik protein_coding protein_coding MGP_CBAJ_T0051127.1 MGP_CBAJ_G0024737.1 mouse_genomes_project 19 30316297 30423606 - MGP_CBAJ_P0051127 9930021J03Rik protein_coding protein_coding MGP_CBAJ_T0051128.1 MGP_CBAJ_G0024737.1 mouse_genomes_project 19 30321444 30364510 - MGP_CBAJ_P0051128 9930021J03Rik protein_coding nonsense_mediated_decay MGP_CBAJ_T0050905.1 MGP_CBAJ_G0024651.1 mouse_genomes_project 19 11749956 11750781 + MGP_CBAJ_P0050905 Olfr1474 protein_coding protein_coding MGP_CBAJ_T0050747.1 MGP_CBAJ_G0024569.1 mouse_genomes_project 19 8686699 8700564 + MGP_CBAJ_P0050747 Prpf19 protein_coding protein_coding MGP_CBAJ_T0050748.1 MGP_CBAJ_G0024569.1 mouse_genomes_project 19 8686745 8689380 + Prpf19 protein_coding retained_intron MGP_CBAJ_T0050749.1 MGP_CBAJ_G0024569.1 mouse_genomes_project 19 8686750 8689729 + Prpf19 protein_coding retained_intron MGP_CBAJ_T0050750.1 MGP_CBAJ_G0024569.1 mouse_genomes_project 19 8686841 8690836 + Prpf19 protein_coding retained_intron MGP_CBAJ_T0050751.1 MGP_CBAJ_G0024569.1 mouse_genomes_project 19 8686882 8704599 + MGP_CBAJ_P0050751 Prpf19 protein_coding protein_coding MGP_CBAJ_T0050752.1 MGP_CBAJ_G0024569.1 mouse_genomes_project 19 8690113 8700538 + Prpf19 protein_coding processed_transcript MGP_CBAJ_T0050753.1 MGP_CBAJ_G0024569.1 mouse_genomes_project 19 8690837 8694229 + Prpf19 protein_coding retained_intron MGP_CBAJ_T0050754.1 MGP_CBAJ_G0024569.1 mouse_genomes_project 19 8691750 8692462 + Prpf19 protein_coding retained_intron MGP_CBAJ_T0051626.1 MGP_CBAJ_G0024911.1 mouse_genomes_project 19 49305382 49309869 + MGP_CBAJ_P0051626 Elovl3 protein_coding protein_coding MGP_CBAJ_T0099077.1 MGP_CBAJ_G0037332.1 mouse_genomes_project 19 47882286 47882393 + Gm25482 snRNA snRNA MGP_CBAJ_T0051231.1 MGP_CBAJ_G0024782.1 mouse_genomes_project 19 38188016 38261810 + MGP_CBAJ_P0051231 Hectd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051232.1 MGP_CBAJ_G0024782.1 mouse_genomes_project 19 38188045 38260920 + MGP_CBAJ_P0051232 Hectd2 protein_coding protein_coding MGP_CBAJ_T0051233.1 MGP_CBAJ_G0024782.1 mouse_genomes_project 19 38188046 38228585 + Hectd2 protein_coding retained_intron MGP_CBAJ_T0051234.1 MGP_CBAJ_G0024782.1 mouse_genomes_project 19 38188046 38261813 + MGP_CBAJ_P0051234 Hectd2 protein_coding protein_coding MGP_CBAJ_T0051235.1 MGP_CBAJ_G0024782.1 mouse_genomes_project 19 38188055 38234819 + Hectd2 protein_coding retained_intron MGP_CBAJ_T0051236.1 MGP_CBAJ_G0024782.1 mouse_genomes_project 19 38188212 38203196 + Hectd2 protein_coding retained_intron MGP_CBAJ_T0051237.1 MGP_CBAJ_G0024782.1 mouse_genomes_project 19 38188243 38259522 + MGP_CBAJ_P0051237 Hectd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051238.1 MGP_CBAJ_G0024782.1 mouse_genomes_project 19 38222932 38259522 + MGP_CBAJ_P0051238 Hectd2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051239.1 MGP_CBAJ_G0024782.1 mouse_genomes_project 19 38244394 38251626 + Hectd2 protein_coding retained_intron MGP_CBAJ_T0051219.1 MGP_CBAJ_G0024777.1 mouse_genomes_project 19 36325374 36382963 + MGP_CBAJ_P0051219 Kif20b protein_coding unknown_likely_coding MGP_CBAJ_T0051220.1 MGP_CBAJ_G0024777.1 mouse_genomes_project 19 36325426 36383124 + MGP_CBAJ_P0051220 Kif20b protein_coding protein_coding MGP_CBAJ_T0051545.1 MGP_CBAJ_G0024888.1 mouse_genomes_project 19 47864184 47926283 + MGP_CBAJ_P0051545 Fam178a protein_coding protein_coding MGP_CBAJ_T0051546.1 MGP_CBAJ_G0024888.1 mouse_genomes_project 19 47880153 47926285 + MGP_CBAJ_P0051546 Fam178a protein_coding unknown_likely_coding MGP_CBAJ_T0051316.1 MGP_CBAJ_G0024808.1 mouse_genomes_project 19 41150403 41179462 + MGP_CBAJ_P0051316 Cyp2c65 protein_coding protein_coding MGP_CBAJ_T0050455.1 MGP_CBAJ_G0024472.1 mouse_genomes_project 19 4051366 4062763 - MGP_CBAJ_P0050455 Rps6ka4 protein_coding protein_coding MGP_CBAJ_T0051431.1 MGP_CBAJ_G0024851.1 mouse_genomes_project 19 44587106 44592893 - MGP_CBAJ_P0051431 Avpi1 protein_coding protein_coding MGP_CBAJ_T0051432.1 MGP_CBAJ_G0024851.1 mouse_genomes_project 19 44588612 44592823 - MGP_CBAJ_P0051432 Avpi1 protein_coding protein_coding MGP_CBAJ_T0050869.1 MGP_CBAJ_G0024623.1 mouse_genomes_project 19 10799648 10800713 + MGP_CBAJ_P0050869 Olfr1442 protein_coding protein_coding MGP_CBAJ_T0049900.1 MGP_CBAJ_G0024329.1 mouse_genomes_project 19 187911 192469 - MGP_CBAJ_P0049900 Gal protein_coding protein_coding MGP_CBAJ_T0051452.1 MGP_CBAJ_G0024858.1 mouse_genomes_project 19 45086459 45105156 - MGP_CBAJ_P0051452 Loxl4 protein_coding protein_coding MGP_CBAJ_T0051453.1 MGP_CBAJ_G0024858.1 mouse_genomes_project 19 45087583 45105156 - MGP_CBAJ_P0051453 Loxl4 protein_coding protein_coding MGP_CBAJ_T0051454.1 MGP_CBAJ_G0024858.1 mouse_genomes_project 19 45087811 45100987 - MGP_CBAJ_P0051454 Loxl4 protein_coding protein_coding MGP_CBAJ_T0051455.1 MGP_CBAJ_G0024858.1 mouse_genomes_project 19 45094030 45095809 - Loxl4 protein_coding processed_transcript MGP_CBAJ_T0051456.1 MGP_CBAJ_G0024858.1 mouse_genomes_project 19 45100085 45105115 - MGP_CBAJ_P0051456 Loxl4 protein_coding protein_coding MGP_CBAJ_T0010195.1 MGP_CBAJ_G0008333.1 mouse_genomes_project 19 49530247 49530356 + Mir146b miRNA miRNA MGP_CBAJ_T0050163.1 MGP_CBAJ_G0024408.1 mouse_genomes_project 19 2500395 2511702 - MGP_CBAJ_P0050163 Sart1 protein_coding protein_coding MGP_CBAJ_T0050720.1 MGP_CBAJ_G0024558.1 mouse_genomes_project 19 8329137 8342310 + MGP_CBAJ_P0050720 Cyb561a3 protein_coding protein_coding MGP_CBAJ_T0050805.1 MGP_CBAJ_G0024589.1 mouse_genomes_project 19 9341316 9361096 + MGP_CBAJ_P0050805 Ms4a6c protein_coding protein_coding MGP_CBAJ_T0050806.1 MGP_CBAJ_G0024589.1 mouse_genomes_project 19 9341375 9344702 + Ms4a6c protein_coding retained_intron MGP_CBAJ_T0051317.1 MGP_CBAJ_G0024809.1 mouse_genomes_project 19 41200760 41250261 + MGP_CBAJ_P0051317 Cyp2c66 protein_coding protein_coding MGP_CBAJ_T0051318.1 MGP_CBAJ_G0024809.1 mouse_genomes_project 19 41200772 41250580 + MGP_CBAJ_P0051318 Cyp2c66 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051779.1 MGP_CBAJ_G0024967.1 mouse_genomes_project 19 59623094 59675316 - MGP_CBAJ_P0051779 Gucy2g protein_coding protein_coding MGP_CBAJ_T0050496.1 MGP_CBAJ_G0024490.1 mouse_genomes_project 19 4320738 4479594 + MGP_CBAJ_P0050496 Macrod1 protein_coding protein_coding MGP_CBAJ_T0051332.1 MGP_CBAJ_G0024819.1 mouse_genomes_project 19 42311990 42337976 + MGP_CBAJ_P0051332 Cyp2c50 protein_coding protein_coding MGP_CBAJ_T0051183.1 MGP_CBAJ_G0024756.1 mouse_genomes_project 19 34596115 34605994 - MGP_CBAJ_P0051183 Lipo5 protein_coding protein_coding MGP_CBAJ_T0051925.1 MGP_CBAJ_G0025011.1 mouse_genomes_project 19 66196240 66305097 - MGP_CBAJ_P0051925 Zfp950 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051926.1 MGP_CBAJ_G0025011.1 mouse_genomes_project 19 66269783 66305142 - MGP_CBAJ_P0051926 Zfp950 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051927.1 MGP_CBAJ_G0025011.1 mouse_genomes_project 19 66271339 66272174 - Zfp950 protein_coding retained_intron MGP_CBAJ_T0051928.1 MGP_CBAJ_G0025011.1 mouse_genomes_project 19 66271924 66305119 - MGP_CBAJ_P0051928 Zfp950 protein_coding protein_coding MGP_CBAJ_T0051929.1 MGP_CBAJ_G0025011.1 mouse_genomes_project 19 66271943 66305121 - MGP_CBAJ_P0051929 Zfp950 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051930.1 MGP_CBAJ_G0025011.1 mouse_genomes_project 19 66272074 66305072 - MGP_CBAJ_P0051930 Zfp950 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051931.1 MGP_CBAJ_G0025011.1 mouse_genomes_project 19 66272932 66305064 - MGP_CBAJ_P0051931 Zfp950 protein_coding protein_coding MGP_CBAJ_T0051932.1 MGP_CBAJ_G0025011.1 mouse_genomes_project 19 66274236 66274407 - MGP_CBAJ_P0051932 Zfp950 protein_coding protein_coding MGP_CBAJ_T0051933.1 MGP_CBAJ_G0025011.1 mouse_genomes_project 19 66283564 66305092 - MGP_CBAJ_P0051933 Zfp950 protein_coding protein_coding MGP_CBAJ_T0051934.1 MGP_CBAJ_G0025011.1 mouse_genomes_project 19 66288632 66289196 - MGP_CBAJ_P0051934 Zfp950 protein_coding protein_coding MGP_CBAJ_T0051399.1 MGP_CBAJ_G0024841.1 mouse_genomes_project 19 44348786 44359706 + MGP_CBAJ_P0051399 Pgam1 protein_coding protein_coding MGP_CBAJ_T0101414.1 MGP_CBAJ_G0039465.1 mouse_genomes_project 19 49538902 49541039 - unitary_pseudogene processed_transcript MGP_CBAJ_T0101415.1 MGP_CBAJ_G0039465.1 mouse_genomes_project 19 49539600 49541039 - unitary_pseudogene unitary_pseudogene MGP_CBAJ_T0050130.1 MGP_CBAJ_G0024389.1 mouse_genomes_project 19 2043963 2049580 - MGP_CBAJ_P0050130 Npas4 protein_coding protein_coding MGP_CBAJ_T0050837.1 MGP_CBAJ_G0024600.1 mouse_genomes_project 19 9682463 9730947 - MGP_CBAJ_P0050837 Stx3 protein_coding protein_coding MGP_CBAJ_T0050838.1 MGP_CBAJ_G0024600.1 mouse_genomes_project 19 9682463 9730431 - MGP_CBAJ_P0050838 Stx3 protein_coding protein_coding MGP_CBAJ_T0050839.1 MGP_CBAJ_G0024600.1 mouse_genomes_project 19 9684831 9730947 - MGP_CBAJ_P0050839 Stx3 protein_coding protein_coding MGP_CBAJ_T0050907.1 MGP_CBAJ_G0024653.1 mouse_genomes_project 19 11957521 11960830 + MGP_CBAJ_P0050907 protein_coding protein_coding MGP_CBAJ_T0050179.1 MGP_CBAJ_G0024416.1 mouse_genomes_project 19 2611527 2615135 + MGP_CBAJ_P0050179 Efemp2 protein_coding protein_coding MGP_CBAJ_T0050180.1 MGP_CBAJ_G0024416.1 mouse_genomes_project 19 2611869 2613623 + MGP_CBAJ_P0050180 Efemp2 protein_coding protein_coding MGP_CBAJ_T0050181.1 MGP_CBAJ_G0024416.1 mouse_genomes_project 19 2612242 2620461 + MGP_CBAJ_P0050181 Efemp2 protein_coding protein_coding MGP_CBAJ_T0050182.1 MGP_CBAJ_G0024416.1 mouse_genomes_project 19 2612261 2616974 + Efemp2 protein_coding retained_intron MGP_CBAJ_T0050183.1 MGP_CBAJ_G0024416.1 mouse_genomes_project 19 2612294 2619349 + MGP_CBAJ_P0050183 Efemp2 protein_coding protein_coding MGP_CBAJ_T0050184.1 MGP_CBAJ_G0024416.1 mouse_genomes_project 19 2612294 2620461 + MGP_CBAJ_P0050184 Efemp2 protein_coding protein_coding MGP_CBAJ_T0050185.1 MGP_CBAJ_G0024416.1 mouse_genomes_project 19 2612301 2615813 + MGP_CBAJ_P0050185 Efemp2 protein_coding protein_coding MGP_CBAJ_T0050186.1 MGP_CBAJ_G0024416.1 mouse_genomes_project 19 2612304 2620461 + MGP_CBAJ_P0050186 Efemp2 protein_coding protein_coding MGP_CBAJ_T0050187.1 MGP_CBAJ_G0024416.1 mouse_genomes_project 19 2612331 2613023 + Efemp2 protein_coding retained_intron MGP_CBAJ_T0050188.1 MGP_CBAJ_G0024416.1 mouse_genomes_project 19 2612622 2615877 + MGP_CBAJ_P0050188 Efemp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050189.1 MGP_CBAJ_G0024416.1 mouse_genomes_project 19 2612674 2620383 + MGP_CBAJ_P0050189 Efemp2 protein_coding protein_coding MGP_CBAJ_T0050190.1 MGP_CBAJ_G0024416.1 mouse_genomes_project 19 2612859 2618687 + MGP_CBAJ_P0050190 Efemp2 protein_coding protein_coding MGP_CBAJ_T0050191.1 MGP_CBAJ_G0024416.1 mouse_genomes_project 19 2618652 2619524 + MGP_CBAJ_P0050191 Efemp2 protein_coding protein_coding MGP_CBAJ_T0050192.1 MGP_CBAJ_G0024416.1 mouse_genomes_project 19 2618730 2620267 + MGP_CBAJ_P0050192 Efemp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051680.1 MGP_CBAJ_G0024929.1 mouse_genomes_project 19 50190240 50281541 - MGP_CBAJ_P0051680 Nt5c2 protein_coding protein_coding MGP_CBAJ_T0051681.1 MGP_CBAJ_G0024929.1 mouse_genomes_project 19 50190240 50271408 - MGP_CBAJ_P0051681 Nt5c2 protein_coding protein_coding MGP_CBAJ_T0051682.1 MGP_CBAJ_G0024929.1 mouse_genomes_project 19 50191237 50334832 - MGP_CBAJ_P0051682 Nt5c2 protein_coding protein_coding MGP_CBAJ_T0051683.1 MGP_CBAJ_G0024929.1 mouse_genomes_project 19 50194932 50205429 - MGP_CBAJ_P0051683 Nt5c2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050014.1 MGP_CBAJ_G0024354.1 mouse_genomes_project 19 1072726 1078666 + MGP_CBAJ_P0050014 Gpr152 protein_coding protein_coding MGP_CBAJ_T0051058.1 MGP_CBAJ_G0024718.1 mouse_genomes_project 19 27671902 27686548 + MGP_CBAJ_P0051058 Kcnv2 protein_coding protein_coding MGP_CBAJ_T0050137.1 MGP_CBAJ_G0024395.1 mouse_genomes_project 19 2134837 2136111 - Tmem151a protein_coding processed_transcript MGP_CBAJ_T0050138.1 MGP_CBAJ_G0024395.1 mouse_genomes_project 19 2135013 2151641 - MGP_CBAJ_P0050138 Tmem151a protein_coding protein_coding MGP_CBAJ_T0050139.1 MGP_CBAJ_G0024395.1 mouse_genomes_project 19 2135832 2151641 - MGP_CBAJ_P0050139 Tmem151a protein_coding protein_coding MGP_CBAJ_T0050140.1 MGP_CBAJ_G0024395.1 mouse_genomes_project 19 2145479 2151685 - MGP_CBAJ_P0050140 Tmem151a protein_coding protein_coding MGP_CBAJ_T0050141.1 MGP_CBAJ_G0024395.1 mouse_genomes_project 19 2149051 2151035 - Tmem151a protein_coding processed_transcript MGP_CBAJ_T0051624.1 MGP_CBAJ_G0024910.1 mouse_genomes_project 19 49237359 49246943 + MGP_CBAJ_P0051624 Nolc1 protein_coding protein_coding MGP_CBAJ_T0051625.1 MGP_CBAJ_G0024910.1 mouse_genomes_project 19 49237526 49246952 + MGP_CBAJ_P0051625 Nolc1 protein_coding unknown_likely_coding MGP_CBAJ_T0017458.1 MGP_CBAJ_G0015129.1 mouse_genomes_project 19 38253279 38354922 - 1500017E21Rik processed_transcript processed_transcript MGP_CBAJ_T0017459.1 MGP_CBAJ_G0015129.1 mouse_genomes_project 19 38260095 38335764 - 1500017E21Rik processed_transcript processed_transcript MGP_CBAJ_T0017460.1 MGP_CBAJ_G0015129.1 mouse_genomes_project 19 38260107 38266701 - 1500017E21Rik processed_transcript processed_transcript MGP_CBAJ_T0017461.1 MGP_CBAJ_G0015129.1 mouse_genomes_project 19 38260112 38266681 - 1500017E21Rik processed_transcript processed_transcript MGP_CBAJ_T0017462.1 MGP_CBAJ_G0015129.1 mouse_genomes_project 19 38287369 38302872 - 1500017E21Rik processed_transcript processed_transcript MGP_CBAJ_T0017463.1 MGP_CBAJ_G0015129.1 mouse_genomes_project 19 38289506 38335558 - 1500017E21Rik processed_transcript processed_transcript MGP_CBAJ_T0017464.1 MGP_CBAJ_G0015129.1 mouse_genomes_project 19 38302715 38335617 - 1500017E21Rik processed_transcript processed_transcript MGP_CBAJ_T0017465.1 MGP_CBAJ_G0015129.1 mouse_genomes_project 19 38302884 38335613 - 1500017E21Rik processed_transcript processed_transcript MGP_CBAJ_T0098171.1 MGP_CBAJ_G0036444.1 mouse_genomes_project 19 3027148 3027204 - Gm27702 sRNA sRNA MGP_CBAJ_T0051911.1 MGP_CBAJ_G0025005.1 mouse_genomes_project 19 65873334 65877265 + MGP_CBAJ_P0051911 Nanos1 protein_coding protein_coding MGP_CBAJ_T0050966.1 MGP_CBAJ_G0024684.1 mouse_genomes_project 19 19749676 19771478 - MGP_CBAJ_P0050966 Anxa1 protein_coding protein_coding MGP_CBAJ_T0050967.1 MGP_CBAJ_G0024684.1 mouse_genomes_project 19 19749804 19771206 - Anxa1 protein_coding processed_transcript MGP_CBAJ_T0050968.1 MGP_CBAJ_G0024684.1 mouse_genomes_project 19 19749804 19754363 - Anxa1 protein_coding retained_intron MGP_CBAJ_T0050969.1 MGP_CBAJ_G0024684.1 mouse_genomes_project 19 19756416 19757239 - Anxa1 protein_coding retained_intron MGP_CBAJ_T0050970.1 MGP_CBAJ_G0024684.1 mouse_genomes_project 19 19756416 19758679 - Anxa1 protein_coding retained_intron MGP_CBAJ_T0050971.1 MGP_CBAJ_G0024684.1 mouse_genomes_project 19 19756767 19760779 - Anxa1 protein_coding retained_intron MGP_CBAJ_T0050972.1 MGP_CBAJ_G0024684.1 mouse_genomes_project 19 19758316 19771185 - Anxa1 protein_coding processed_transcript MGP_CBAJ_T0006994.1 MGP_CBAJ_G0005737.1 mouse_genomes_project 19 47573860 47576763 - Gm26644 lincRNA lincRNA MGP_CBAJ_T0051874.1 MGP_CBAJ_G0024987.1 mouse_genomes_project 19 63046862 63287321 - MGP_CBAJ_P0051874 Gfra1 protein_coding protein_coding MGP_CBAJ_T0051875.1 MGP_CBAJ_G0024987.1 mouse_genomes_project 19 63046870 63286515 - MGP_CBAJ_P0051875 Gfra1 protein_coding protein_coding MGP_CBAJ_T0051876.1 MGP_CBAJ_G0024987.1 mouse_genomes_project 19 63047950 63286389 - MGP_CBAJ_P0051876 Gfra1 protein_coding protein_coding MGP_CBAJ_T0051877.1 MGP_CBAJ_G0024987.1 mouse_genomes_project 19 63049416 63287282 - MGP_CBAJ_P0051877 Gfra1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051878.1 MGP_CBAJ_G0024987.1 mouse_genomes_project 19 63049416 63287224 - MGP_CBAJ_P0051878 Gfra1 protein_coding protein_coding MGP_CBAJ_T0051879.1 MGP_CBAJ_G0024987.1 mouse_genomes_project 19 63285258 63286929 - MGP_CBAJ_P0051879 Gfra1 protein_coding protein_coding MGP_CBAJ_T0051880.1 MGP_CBAJ_G0024987.1 mouse_genomes_project 19 63285275 63287832 - MGP_CBAJ_P0051880 Gfra1 protein_coding protein_coding MGP_CBAJ_T0051881.1 MGP_CBAJ_G0024987.1 mouse_genomes_project 19 63285344 63286543 - MGP_CBAJ_P0051881 Gfra1 protein_coding protein_coding MGP_CBAJ_T0051882.1 MGP_CBAJ_G0024987.1 mouse_genomes_project 19 63286246 63287084 - MGP_CBAJ_P0051882 Gfra1 protein_coding protein_coding MGP_CBAJ_T0050713.1 MGP_CBAJ_G0024556.1 mouse_genomes_project 19 8282767 8304776 - MGP_CBAJ_P0050713 Tmem216 protein_coding protein_coding MGP_CBAJ_T0050714.1 MGP_CBAJ_G0024556.1 mouse_genomes_project 19 8288309 8304791 - MGP_CBAJ_P0050714 Tmem216 protein_coding protein_coding MGP_CBAJ_T0050715.1 MGP_CBAJ_G0024556.1 mouse_genomes_project 19 8299499 8305278 - MGP_CBAJ_P0050715 Tmem216 protein_coding protein_coding MGP_CBAJ_T0050716.1 MGP_CBAJ_G0024556.1 mouse_genomes_project 19 8299530 8304791 - MGP_CBAJ_P0050716 Tmem216 protein_coding protein_coding MGP_CBAJ_T0050717.1 MGP_CBAJ_G0024556.1 mouse_genomes_project 19 8299588 8304791 - MGP_CBAJ_P0050717 Tmem216 protein_coding protein_coding MGP_CBAJ_T0050718.1 MGP_CBAJ_G0024556.1 mouse_genomes_project 19 8303786 8304791 - Tmem216 protein_coding retained_intron MGP_CBAJ_T0050995.1 MGP_CBAJ_G0024694.1 mouse_genomes_project 19 21724843 22689091 + MGP_CBAJ_P0050995 Trpm3 protein_coding protein_coding MGP_CBAJ_T0050996.1 MGP_CBAJ_G0024694.1 mouse_genomes_project 19 21724843 22689091 + MGP_CBAJ_P0050996 Trpm3 protein_coding protein_coding MGP_CBAJ_T0050997.1 MGP_CBAJ_G0024694.1 mouse_genomes_project 19 21724843 22689091 + MGP_CBAJ_P0050997 Trpm3 protein_coding protein_coding MGP_CBAJ_T0050998.1 MGP_CBAJ_G0024694.1 mouse_genomes_project 19 22072769 22689093 + MGP_CBAJ_P0050998 Trpm3 protein_coding protein_coding MGP_CBAJ_T0050999.1 MGP_CBAJ_G0024694.1 mouse_genomes_project 19 22353149 22430032 + MGP_CBAJ_P0050999 Trpm3 protein_coding protein_coding MGP_CBAJ_T0051000.1 MGP_CBAJ_G0024694.1 mouse_genomes_project 19 22353149 22602905 + MGP_CBAJ_P0051000 Trpm3 protein_coding protein_coding MGP_CBAJ_T0051108.1 MGP_CBAJ_G0024733.1 mouse_genomes_project 19 29989031 30053834 + MGP_CBAJ_P0051108 Pdcd1lg2 protein_coding protein_coding MGP_CBAJ_T0051493.1 MGP_CBAJ_G0024870.1 mouse_genomes_project 19 46544387 46615172 - MGP_CBAJ_P0051493 Dnmbp protein_coding protein_coding MGP_CBAJ_T0051494.1 MGP_CBAJ_G0024870.1 mouse_genomes_project 19 46544513 46649191 - MGP_CBAJ_P0051494 Dnmbp protein_coding unknown_likely_coding MGP_CBAJ_T0051553.1 MGP_CBAJ_G0024892.1 mouse_genomes_project 19 47961404 47979565 + MGP_CBAJ_P0051553 Lzts2 protein_coding protein_coding MGP_CBAJ_T0051554.1 MGP_CBAJ_G0024892.1 mouse_genomes_project 19 47961438 47979565 + MGP_CBAJ_P0051554 Lzts2 protein_coding protein_coding MGP_CBAJ_T0051555.1 MGP_CBAJ_G0024892.1 mouse_genomes_project 19 47970648 47979565 + MGP_CBAJ_P0051555 Lzts2 protein_coding protein_coding MGP_CBAJ_T0049888.1 MGP_CBAJ_G0024325.1 mouse_genomes_project 19 14576 38524 - MGP_CBAJ_P0049888 Ighmbp2 protein_coding protein_coding MGP_CBAJ_T0049889.1 MGP_CBAJ_G0024325.1 mouse_genomes_project 19 18458 38718 - MGP_CBAJ_P0049889 Ighmbp2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049890.1 MGP_CBAJ_G0024325.1 mouse_genomes_project 19 19004 21353 - Ighmbp2 protein_coding retained_intron MGP_CBAJ_T0051913.1 MGP_CBAJ_G0025007.1 mouse_genomes_project 19 65937262 65961196 + MGP_CBAJ_P0051913 Fam45a protein_coding protein_coding MGP_CBAJ_T0051914.1 MGP_CBAJ_G0025007.1 mouse_genomes_project 19 65937289 65957442 + MGP_CBAJ_P0051914 Fam45a protein_coding protein_coding MGP_CBAJ_T0051915.1 MGP_CBAJ_G0025007.1 mouse_genomes_project 19 65937295 65962420 + MGP_CBAJ_P0051915 Fam45a protein_coding protein_coding MGP_CBAJ_T0051916.1 MGP_CBAJ_G0025007.1 mouse_genomes_project 19 65937300 65943965 + Fam45a protein_coding retained_intron MGP_CBAJ_T0051917.1 MGP_CBAJ_G0025007.1 mouse_genomes_project 19 65937315 65948132 + MGP_CBAJ_P0051917 Fam45a protein_coding nonsense_mediated_decay MGP_CBAJ_T0051918.1 MGP_CBAJ_G0025007.1 mouse_genomes_project 19 65937735 65940303 + Fam45a protein_coding processed_transcript MGP_CBAJ_T0051919.1 MGP_CBAJ_G0025007.1 mouse_genomes_project 19 65957127 65961307 + Fam45a protein_coding retained_intron MGP_CBAJ_T0051565.1 MGP_CBAJ_G0024896.1 mouse_genomes_project 19 48119440 48132188 + MGP_CBAJ_P0051565 Tlx1 protein_coding protein_coding MGP_CBAJ_T0051566.1 MGP_CBAJ_G0024896.1 mouse_genomes_project 19 48120229 48131644 + MGP_CBAJ_P0051566 Tlx1 protein_coding protein_coding MGP_CBAJ_T0051887.1 MGP_CBAJ_G0024992.1 mouse_genomes_project 19 63669302 63679684 - MGP_CBAJ_P0051887 1700019N19Rik protein_coding protein_coding MGP_CBAJ_T0051888.1 MGP_CBAJ_G0024992.1 mouse_genomes_project 19 63669495 63678413 - MGP_CBAJ_P0051888 1700019N19Rik protein_coding protein_coding MGP_CBAJ_T0013215.1 MGP_CBAJ_G0011327.1 mouse_genomes_project 19 45894678 45895578 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0050216.1 MGP_CBAJ_G0024426.1 mouse_genomes_project 19 2826149 2838656 - MGP_CBAJ_P0050216 Sipa1 protein_coding protein_coding MGP_CBAJ_T0050217.1 MGP_CBAJ_G0024426.1 mouse_genomes_project 19 2826149 2838656 - MGP_CBAJ_P0050217 Sipa1 protein_coding protein_coding MGP_CBAJ_T0050218.1 MGP_CBAJ_G0024426.1 mouse_genomes_project 19 2826149 2838656 - MGP_CBAJ_P0050218 Sipa1 protein_coding protein_coding MGP_CBAJ_T0050219.1 MGP_CBAJ_G0024426.1 mouse_genomes_project 19 2826149 2838656 - MGP_CBAJ_P0050219 Sipa1 protein_coding protein_coding MGP_CBAJ_T0051717.1 MGP_CBAJ_G0024945.1 mouse_genomes_project 19 51154015 51290199 - MGP_CBAJ_P0051717 Cfap43 protein_coding unknown_likely_coding MGP_CBAJ_T0051718.1 MGP_CBAJ_G0024945.1 mouse_genomes_project 19 51154024 51290254 - MGP_CBAJ_P0051718 Cfap43 protein_coding protein_coding MGP_CBAJ_T0051719.1 MGP_CBAJ_G0024945.1 mouse_genomes_project 19 51154069 51194738 - Cfap43 protein_coding processed_transcript MGP_CBAJ_T0051720.1 MGP_CBAJ_G0024945.1 mouse_genomes_project 19 51154069 51194738 - Cfap43 protein_coding processed_transcript MGP_CBAJ_T0051721.1 MGP_CBAJ_G0024945.1 mouse_genomes_project 19 51172161 51194746 - Cfap43 protein_coding processed_transcript MGP_CBAJ_T0051722.1 MGP_CBAJ_G0024945.1 mouse_genomes_project 19 51223301 51380360 - Cfap43 protein_coding retained_intron MGP_CBAJ_T0051723.1 MGP_CBAJ_G0024945.1 mouse_genomes_project 19 51242402 51259416 - Cfap43 protein_coding processed_transcript MGP_CBAJ_T0051724.1 MGP_CBAJ_G0024945.1 mouse_genomes_project 19 51273807 51290233 - Cfap43 protein_coding retained_intron MGP_CBAJ_T0051730.1 MGP_CBAJ_G0024945.1 mouse_genomes_project 19 51352339 51380372 - MGP_CBAJ_P0051730 Cfap43 protein_coding protein_coding MGP_CBAJ_T0006968.1 MGP_CBAJ_G0005719.1 mouse_genomes_project 19 14671929 14699601 + C130060C02Rik lincRNA lincRNA MGP_CBAJ_T0051692.1 MGP_CBAJ_G0024937.1 mouse_genomes_project 19 50491668 50497553 - MGP_CBAJ_P0051692 Calhm3 protein_coding protein_coding MGP_CBAJ_T0051107.1 MGP_CBAJ_G0024732.1 mouse_genomes_project 19 29943619 29966583 + MGP_CBAJ_P0051107 Cd274 protein_coding protein_coding MGP_CBAJ_T0051319.1 MGP_CBAJ_G0024810.1 mouse_genomes_project 19 41352944 41417372 + MGP_CBAJ_P0051319 Cyp2c29 protein_coding protein_coding MGP_CBAJ_T0051320.1 MGP_CBAJ_G0024810.1 mouse_genomes_project 19 41369390 41417423 + MGP_CBAJ_P0051320 Cyp2c29 protein_coding protein_coding MGP_CBAJ_T0051321.1 MGP_CBAJ_G0024810.1 mouse_genomes_project 19 41369390 41417437 + MGP_CBAJ_P0051321 Cyp2c29 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050544.1 MGP_CBAJ_G0024502.1 mouse_genomes_project 19 4909002 4919540 - MGP_CBAJ_P0050544 Lgals12 protein_coding protein_coding MGP_CBAJ_T0050545.1 MGP_CBAJ_G0024502.1 mouse_genomes_project 19 4909003 4919525 - MGP_CBAJ_P0050545 Lgals12 protein_coding protein_coding MGP_CBAJ_T0050546.1 MGP_CBAJ_G0024502.1 mouse_genomes_project 19 4909056 4919450 - MGP_CBAJ_P0050546 Lgals12 protein_coding protein_coding MGP_CBAJ_T0050772.1 MGP_CBAJ_G0024578.1 mouse_genomes_project 19 8962991 8991394 - MGP_CBAJ_P0050772 1700025F22Rik protein_coding protein_coding MGP_CBAJ_T0050773.1 MGP_CBAJ_G0024578.1 mouse_genomes_project 19 8962991 8985252 - MGP_CBAJ_P0050773 1700025F22Rik protein_coding protein_coding MGP_CBAJ_T0050774.1 MGP_CBAJ_G0024578.1 mouse_genomes_project 19 8962991 8991380 - MGP_CBAJ_P0050774 1700025F22Rik protein_coding protein_coding MGP_CBAJ_T0050775.1 MGP_CBAJ_G0024578.1 mouse_genomes_project 19 8962991 8991380 - MGP_CBAJ_P0050775 1700025F22Rik protein_coding protein_coding MGP_CBAJ_T0098192.1 MGP_CBAJ_G0036465.1 mouse_genomes_project 19 9591722 9591861 + Gm26183 scaRNA scaRNA MGP_CBAJ_T0050333.1 MGP_CBAJ_G0024457.1 mouse_genomes_project 19 3390241 3399620 - Arl2 protein_coding retained_intron MGP_CBAJ_T0050334.1 MGP_CBAJ_G0024457.1 mouse_genomes_project 19 3390250 3399886 - MGP_CBAJ_P0050334 Arl2 protein_coding protein_coding MGP_CBAJ_T0050335.1 MGP_CBAJ_G0024457.1 mouse_genomes_project 19 3393337 3394028 - Arl2 protein_coding retained_intron MGP_CBAJ_T0007007.1 MGP_CBAJ_G0005746.1 mouse_genomes_project 19 57601158 57624755 - Mirt1 lincRNA lincRNA MGP_CBAJ_T0007008.1 MGP_CBAJ_G0005746.1 mouse_genomes_project 19 57603904 57607205 - Mirt1 lincRNA lincRNA MGP_CBAJ_T0007009.1 MGP_CBAJ_G0005746.1 mouse_genomes_project 19 57611552 57614006 - Mirt1 lincRNA lincRNA MGP_CBAJ_T0050233.1 MGP_CBAJ_G0024429.1 mouse_genomes_project 19 2881889 2884622 + MGP_CBAJ_P0050233 Kcnk7 protein_coding protein_coding MGP_CBAJ_T0050852.1 MGP_CBAJ_G0024613.1 mouse_genomes_project 19 10370439 10371300 - MGP_CBAJ_P0050852 Olfr1436 protein_coding protein_coding MGP_CBAJ_T0097796.1 MGP_CBAJ_G0036069.1 mouse_genomes_project 19 11273374 11273895 - pseudogene pseudogene MGP_CBAJ_T0051323.1 MGP_CBAJ_G0024812.1 mouse_genomes_project 19 41576559 41659251 + MGP_CBAJ_P0051323 Cyp2c39 protein_coding protein_coding MGP_CBAJ_T0010159.1 MGP_CBAJ_G0008297.1 mouse_genomes_project 19 1214628 1214689 - Mir6985 miRNA miRNA MGP_CBAJ_T0051099.1 MGP_CBAJ_G0024731.1 mouse_genomes_project 19 29924779 29934561 - MGP_CBAJ_P0051099 Plgrkt protein_coding protein_coding MGP_CBAJ_T0051100.1 MGP_CBAJ_G0024731.1 mouse_genomes_project 19 29926579 29928048 - Plgrkt protein_coding retained_intron MGP_CBAJ_T0051101.1 MGP_CBAJ_G0024731.1 mouse_genomes_project 19 29927216 29937572 - MGP_CBAJ_P0051101 Plgrkt protein_coding protein_coding MGP_CBAJ_T0051102.1 MGP_CBAJ_G0024731.1 mouse_genomes_project 19 29927310 29937989 - MGP_CBAJ_P0051102 Plgrkt protein_coding protein_coding MGP_CBAJ_T0051103.1 MGP_CBAJ_G0024731.1 mouse_genomes_project 19 29934539 29943473 - MGP_CBAJ_P0051103 Plgrkt protein_coding protein_coding MGP_CBAJ_T0051104.1 MGP_CBAJ_G0024731.1 mouse_genomes_project 19 29937018 29940064 - Plgrkt protein_coding processed_transcript MGP_CBAJ_T0051105.1 MGP_CBAJ_G0024731.1 mouse_genomes_project 19 29938253 29940627 - Plgrkt protein_coding processed_transcript MGP_CBAJ_T0051106.1 MGP_CBAJ_G0024731.1 mouse_genomes_project 19 29940239 29943555 - Plgrkt protein_coding processed_transcript MGP_CBAJ_T0099073.1 MGP_CBAJ_G0037328.1 mouse_genomes_project 19 38965916 38966019 - Gm25268 snRNA snRNA MGP_CBAJ_T0051884.1 MGP_CBAJ_G0024989.1 mouse_genomes_project 19 63530366 63548491 + MGP_CBAJ_P0051884 Pnlip protein_coding protein_coding MGP_CBAJ_T0050157.1 MGP_CBAJ_G0024403.1 mouse_genomes_project 19 2402536 2420102 + MGP_CBAJ_P0050157 Gal3st3 protein_coding protein_coding MGP_CBAJ_T0050864.1 MGP_CBAJ_G0024622.1 mouse_genomes_project 19 10742400 10764917 + MGP_CBAJ_P0050864 Glyat protein_coding protein_coding MGP_CBAJ_T0050865.1 MGP_CBAJ_G0024622.1 mouse_genomes_project 19 10742607 10760176 + Glyat protein_coding retained_intron MGP_CBAJ_T0050866.1 MGP_CBAJ_G0024622.1 mouse_genomes_project 19 10742607 10744204 + Glyat protein_coding processed_transcript MGP_CBAJ_T0050867.1 MGP_CBAJ_G0024622.1 mouse_genomes_project 19 10742625 10765580 + MGP_CBAJ_P0050867 Glyat protein_coding protein_coding MGP_CBAJ_T0050868.1 MGP_CBAJ_G0024622.1 mouse_genomes_project 19 10748520 10762090 + Glyat protein_coding processed_transcript MGP_CBAJ_T0051251.1 MGP_CBAJ_G0024786.1 mouse_genomes_project 19 38626783 38722956 + MGP_CBAJ_P0051251 Btaf1 protein_coding protein_coding MGP_CBAJ_T0010163.1 MGP_CBAJ_G0008301.1 mouse_genomes_project 19 3537072 3537161 + Mir192 miRNA miRNA MGP_CBAJ_T0050670.1 MGP_CBAJ_G0024537.1 mouse_genomes_project 19 6635666 6640059 - MGP_CBAJ_P0050670 Scgb1a1 protein_coding protein_coding MGP_CBAJ_T0051474.1 MGP_CBAJ_G0024864.1 mouse_genomes_project 19 46269017 46272586 + MGP_CBAJ_P0051474 Nkx2-3 protein_coding protein_coding MGP_CBAJ_T0050193.1 MGP_CBAJ_G0024417.1 mouse_genomes_project 19 2620957 2626629 - MGP_CBAJ_P0050193 Mus81 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050194.1 MGP_CBAJ_G0024417.1 mouse_genomes_project 19 2621444 2627015 - MGP_CBAJ_P0050194 Mus81 protein_coding protein_coding MGP_CBAJ_T0050195.1 MGP_CBAJ_G0024417.1 mouse_genomes_project 19 2621452 2622186 - Mus81 protein_coding retained_intron MGP_CBAJ_T0050196.1 MGP_CBAJ_G0024417.1 mouse_genomes_project 19 2621463 2626548 - Mus81 protein_coding retained_intron MGP_CBAJ_T0050197.1 MGP_CBAJ_G0024417.1 mouse_genomes_project 19 2621465 2622576 - Mus81 protein_coding retained_intron MGP_CBAJ_T0050198.1 MGP_CBAJ_G0024417.1 mouse_genomes_project 19 2621466 2622580 - Mus81 protein_coding retained_intron MGP_CBAJ_T0050199.1 MGP_CBAJ_G0024417.1 mouse_genomes_project 19 2621470 2626898 - MGP_CBAJ_P0050199 Mus81 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050200.1 MGP_CBAJ_G0024417.1 mouse_genomes_project 19 2622302 2623498 - Mus81 protein_coding retained_intron MGP_CBAJ_T0050201.1 MGP_CBAJ_G0024417.1 mouse_genomes_project 19 2622824 2624423 - Mus81 protein_coding processed_transcript MGP_CBAJ_T0050202.1 MGP_CBAJ_G0024417.1 mouse_genomes_project 19 2624100 2626879 - MGP_CBAJ_P0050202 Mus81 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050203.1 MGP_CBAJ_G0024417.1 mouse_genomes_project 19 2626080 2626924 - Mus81 protein_coding retained_intron MGP_CBAJ_T0051023.1 MGP_CBAJ_G0024711.1 mouse_genomes_project 19 25263242 25503491 + MGP_CBAJ_P0051023 Kank1 protein_coding protein_coding MGP_CBAJ_T0051024.1 MGP_CBAJ_G0024711.1 mouse_genomes_project 19 25460208 25479079 + Kank1 protein_coding processed_transcript MGP_CBAJ_T0051025.1 MGP_CBAJ_G0024711.1 mouse_genomes_project 19 25476005 25495040 + MGP_CBAJ_P0051025 Kank1 protein_coding protein_coding MGP_CBAJ_T0051026.1 MGP_CBAJ_G0024711.1 mouse_genomes_project 19 25491356 25493632 + Kank1 protein_coding retained_intron MGP_CBAJ_T0051650.1 MGP_CBAJ_G0024916.1 mouse_genomes_project 19 49515857 49518127 + MGP_CBAJ_P0051650 Fbxl15 protein_coding protein_coding MGP_CBAJ_T0051651.1 MGP_CBAJ_G0024916.1 mouse_genomes_project 19 49515860 49518126 + MGP_CBAJ_P0051651 Fbxl15 protein_coding protein_coding MGP_CBAJ_T0007013.1 MGP_CBAJ_G0005750.1 mouse_genomes_project 19 63453066 63485041 + 1810007D17Rik lincRNA lincRNA MGP_CBAJ_T0049959.1 MGP_CBAJ_G0024339.1 mouse_genomes_project 19 847626 874459 + MGP_CBAJ_P0049959 Aldh3b3 protein_coding protein_coding MGP_CBAJ_T0049960.1 MGP_CBAJ_G0024339.1 mouse_genomes_project 19 847787 874458 + MGP_CBAJ_P0049960 Aldh3b3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0049961.1 MGP_CBAJ_G0024339.1 mouse_genomes_project 19 868331 872794 + MGP_CBAJ_P0049961 Aldh3b3 protein_coding protein_coding MGP_CBAJ_T0050640.1 MGP_CBAJ_G0024526.1 mouse_genomes_project 19 6414003 6424914 + MGP_CBAJ_P0050640 Lbhd1 protein_coding protein_coding MGP_CBAJ_T0050641.1 MGP_CBAJ_G0024526.1 mouse_genomes_project 19 6414195 6417313 + Lbhd1 protein_coding retained_intron MGP_CBAJ_T0050642.1 MGP_CBAJ_G0024526.1 mouse_genomes_project 19 6414201 6417530 + MGP_CBAJ_P0050642 Lbhd1 protein_coding protein_coding MGP_CBAJ_T0050649.1 MGP_CBAJ_G0024526.1 mouse_genomes_project 19 6419549 6422945 + Lbhd1 protein_coding processed_transcript MGP_CBAJ_T0050897.1 MGP_CBAJ_G0024643.1 mouse_genomes_project 19 11387368 11388292 + MGP_CBAJ_P0050897 Olfr1462 protein_coding protein_coding MGP_CBAJ_T0003803.1 MGP_CBAJ_G0003402.1 mouse_genomes_project 19 60946049 60948030 + Gm17197 antisense antisense MGP_CBAJ_T0017468.1 MGP_CBAJ_G0015131.1 mouse_genomes_project 19 49444791 49447925 - Gm16726 processed_transcript processed_transcript MGP_CBAJ_T0051757.1 MGP_CBAJ_G0024958.1 mouse_genomes_project 19 57703255 57716448 + MGP_CBAJ_P0051757 Dusp5 protein_coding protein_coding MGP_CBAJ_T0013198.1 MGP_CBAJ_G0011310.1 mouse_genomes_project 19 10305622 10305778 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0099065.1 MGP_CBAJ_G0037320.1 mouse_genomes_project 19 14345264 14345371 + Gm24319 snRNA snRNA MGP_CBAJ_T0050158.1 MGP_CBAJ_G0024404.1 mouse_genomes_project 19 2454936 2463352 + MGP_CBAJ_P0050158 Catsper1 protein_coding protein_coding MGP_CBAJ_T0010169.1 MGP_CBAJ_G0008307.1 mouse_genomes_project 19 5722325 5722433 - Gm26377 miRNA miRNA MGP_CBAJ_T0050626.1 MGP_CBAJ_G0024522.1 mouse_genomes_project 19 6359321 6370455 + MGP_CBAJ_P0050626 Bscl2 protein_coding protein_coding MGP_CBAJ_T0050627.1 MGP_CBAJ_G0024522.1 mouse_genomes_project 19 6359541 6362091 + Bscl2 protein_coding processed_transcript MGP_CBAJ_T0050628.1 MGP_CBAJ_G0024522.1 mouse_genomes_project 19 6359583 6370439 + MGP_CBAJ_P0050628 Bscl2 protein_coding protein_coding MGP_CBAJ_T0050629.1 MGP_CBAJ_G0024522.1 mouse_genomes_project 19 6361175 6370438 + MGP_CBAJ_P0050629 Bscl2 protein_coding protein_coding MGP_CBAJ_T0050630.1 MGP_CBAJ_G0024522.1 mouse_genomes_project 19 6361220 6370439 + Bscl2 protein_coding retained_intron MGP_CBAJ_T0050631.1 MGP_CBAJ_G0024522.1 mouse_genomes_project 19 6361237 6370410 + MGP_CBAJ_P0050631 Bscl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050632.1 MGP_CBAJ_G0024522.1 mouse_genomes_project 19 6362366 6370438 + MGP_CBAJ_P0050632 Bscl2 protein_coding protein_coding MGP_CBAJ_T0050633.1 MGP_CBAJ_G0024522.1 mouse_genomes_project 19 6362382 6370438 + Bscl2 protein_coding retained_intron MGP_CBAJ_T0050634.1 MGP_CBAJ_G0024522.1 mouse_genomes_project 19 6362382 6370438 + Bscl2 protein_coding retained_intron MGP_CBAJ_T0050635.1 MGP_CBAJ_G0024522.1 mouse_genomes_project 19 6368037 6370395 + MGP_CBAJ_P0050635 Bscl2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051686.1 MGP_CBAJ_G0024932.1 mouse_genomes_project 19 50397576 50417011 + MGP_CBAJ_P0051686 Taf5 protein_coding protein_coding MGP_CBAJ_T0051060.1 MGP_CBAJ_G0024720.1 mouse_genomes_project 19 28163762 28234694 - Rfx3 protein_coding processed_transcript MGP_CBAJ_T0051061.1 MGP_CBAJ_G0024720.1 mouse_genomes_project 19 28164076 28333357 - MGP_CBAJ_P0051061 Rfx3 protein_coding protein_coding MGP_CBAJ_T0051062.1 MGP_CBAJ_G0024720.1 mouse_genomes_project 19 28164076 28307471 - MGP_CBAJ_P0051062 Rfx3 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051063.1 MGP_CBAJ_G0024720.1 mouse_genomes_project 19 28200732 28423512 - Rfx3 protein_coding retained_intron MGP_CBAJ_T0051064.1 MGP_CBAJ_G0024720.1 mouse_genomes_project 19 28267423 28423136 - MGP_CBAJ_P0051064 Rfx3 protein_coding protein_coding MGP_CBAJ_T0100319.1 MGP_CBAJ_G0038574.1 mouse_genomes_project 19 12018252 12018384 - Gm24124 snoRNA snoRNA MGP_CBAJ_T0050842.1 MGP_CBAJ_G0024603.1 mouse_genomes_project 19 9826669 9827721 + MGP_CBAJ_P0050842 Olfr1420 protein_coding protein_coding MGP_CBAJ_T0051146.1 MGP_CBAJ_G0024743.1 mouse_genomes_project 19 30917535 30928567 + MGP_CBAJ_P0051146 Mbl2 protein_coding protein_coding MGP_CBAJ_T0051822.1 MGP_CBAJ_G0024976.1 mouse_genomes_project 19 61136294 61167630 - MGP_CBAJ_P0051822 Dclre1a protein_coding nonsense_mediated_decay MGP_CBAJ_T0051823.1 MGP_CBAJ_G0024976.1 mouse_genomes_project 19 61136296 61166648 - Dclre1a protein_coding retained_intron MGP_CBAJ_T0051824.1 MGP_CBAJ_G0024976.1 mouse_genomes_project 19 61136296 61167702 - MGP_CBAJ_P0051824 Dclre1a protein_coding protein_coding MGP_CBAJ_T0051825.1 MGP_CBAJ_G0024976.1 mouse_genomes_project 19 61136709 61156887 - Dclre1a protein_coding retained_intron MGP_CBAJ_T0051826.1 MGP_CBAJ_G0024976.1 mouse_genomes_project 19 61159514 61161052 - Dclre1a protein_coding processed_transcript MGP_CBAJ_T0051827.1 MGP_CBAJ_G0024976.1 mouse_genomes_project 19 61166350 61167523 - MGP_CBAJ_P0051827 Dclre1a protein_coding protein_coding MGP_CBAJ_T0003766.1 MGP_CBAJ_G0003377.1 mouse_genomes_project 19 909039 909514 - Gm16312 antisense antisense MGP_CBAJ_T0100322.1 MGP_CBAJ_G0038577.1 mouse_genomes_project 19 21842012 21842110 - Gm22506 snoRNA snoRNA MGP_CBAJ_T0051713.1 MGP_CBAJ_G0024943.1 mouse_genomes_project 19 51060763 51106543 - MGP_CBAJ_P0051713 Col17a1 protein_coding protein_coding MGP_CBAJ_T0051714.1 MGP_CBAJ_G0024943.1 mouse_genomes_project 19 51060763 51106543 - MGP_CBAJ_P0051714 Col17a1 protein_coding protein_coding MGP_CBAJ_T0051715.1 MGP_CBAJ_G0024943.1 mouse_genomes_project 19 51062519 51064015 - Col17a1 protein_coding processed_transcript MGP_CBAJ_T0051935.1 MGP_CBAJ_G0025012.1 mouse_genomes_project 19 66372425 66372488 + MGP_CBAJ_P0051935 Gm21836 protein_coding protein_coding MGP_CBAJ_T0007005.1 MGP_CBAJ_G0005745.1 mouse_genomes_project 19 57139316 57147482 + 1700054A03Rik lincRNA lincRNA MGP_CBAJ_T0007006.1 MGP_CBAJ_G0005745.1 mouse_genomes_project 19 57139350 57147482 + 1700054A03Rik lincRNA lincRNA MGP_CBAJ_T0051328.1 MGP_CBAJ_G0024815.1 mouse_genomes_project 19 42015033 42066408 - MGP_CBAJ_P0051328 protein_coding protein_coding MGP_CBAJ_T0099063.1 MGP_CBAJ_G0037318.1 mouse_genomes_project 19 11555621 11555728 - Gm22443 snRNA snRNA MGP_CBAJ_T0051184.1 MGP_CBAJ_G0024757.1 mouse_genomes_project 19 34667240 34701520 - MGP_CBAJ_P0051184 Lipo4 protein_coding protein_coding MGP_CBAJ_T0051185.1 MGP_CBAJ_G0024757.1 mouse_genomes_project 19 34668142 34701539 - MGP_CBAJ_P0051185 Lipo4 protein_coding protein_coding MGP_CBAJ_T0051176.1 MGP_CBAJ_G0024752.1 mouse_genomes_project 19 33692717 33739085 - MGP_CBAJ_P0051176 Atad1 protein_coding protein_coding MGP_CBAJ_T0013221.1 MGP_CBAJ_G0011333.1 mouse_genomes_project 19 63673805 63675594 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0006992.1 MGP_CBAJ_G0005735.1 mouse_genomes_project 19 43196037 43204006 + E030044B06Rik lincRNA lincRNA MGP_CBAJ_T0051591.1 MGP_CBAJ_G0024904.1 mouse_genomes_project 19 48842110 48878243 - MGP_CBAJ_P0051591 Mgea5 protein_coding protein_coding MGP_CBAJ_T0050830.1 MGP_CBAJ_G0024596.1 mouse_genomes_project 19 9566127 9587832 - MGP_CBAJ_P0050830 Oosp1 protein_coding protein_coding MGP_CBAJ_T0050831.1 MGP_CBAJ_G0024596.1 mouse_genomes_project 19 9566202 9587710 - MGP_CBAJ_P0050831 Oosp1 protein_coding protein_coding MGP_CBAJ_T0050832.1 MGP_CBAJ_G0024596.1 mouse_genomes_project 19 9566340 9587716 - MGP_CBAJ_P0050832 Oosp1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050917.1 MGP_CBAJ_G0024663.1 mouse_genomes_project 19 12223708 12224760 - MGP_CBAJ_P0050917 Olfr1499 protein_coding protein_coding MGP_CBAJ_T0051498.1 MGP_CBAJ_G0024873.1 mouse_genomes_project 19 46768443 46807346 - MGP_CBAJ_P0051498 Erlin1 protein_coding protein_coding MGP_CBAJ_T0051499.1 MGP_CBAJ_G0024873.1 mouse_genomes_project 19 46768443 46807595 - MGP_CBAJ_P0051499 Erlin1 protein_coding protein_coding MGP_CBAJ_T0051500.1 MGP_CBAJ_G0024873.1 mouse_genomes_project 19 46768443 46807605 - MGP_CBAJ_P0051500 Erlin1 protein_coding protein_coding MGP_CBAJ_T0051501.1 MGP_CBAJ_G0024873.1 mouse_genomes_project 19 46793084 46807576 - MGP_CBAJ_P0051501 Erlin1 protein_coding protein_coding MGP_CBAJ_T0051502.1 MGP_CBAJ_G0024873.1 mouse_genomes_project 19 46795976 46807217 - MGP_CBAJ_P0051502 Erlin1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0051503.1 MGP_CBAJ_G0024873.1 mouse_genomes_project 19 46795978 46805506 - MGP_CBAJ_P0051503 Erlin1 protein_coding protein_coding MGP_CBAJ_T0051504.1 MGP_CBAJ_G0024873.1 mouse_genomes_project 19 46803894 46807564 - Erlin1 protein_coding retained_intron MGP_CBAJ_T0051505.1 MGP_CBAJ_G0024873.1 mouse_genomes_project 19 46805295 46807516 - Erlin1 protein_coding retained_intron MGP_CBAJ_T0051506.1 MGP_CBAJ_G0024873.1 mouse_genomes_project 19 46807137 46807510 - MGP_CBAJ_P0051506 Erlin1 protein_coding protein_coding MGP_CBAJ_T0013216.1 MGP_CBAJ_G0011328.1 mouse_genomes_project 19 49384226 49384703 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0051384.1 MGP_CBAJ_G0024834.1 mouse_genomes_project 19 43863829 43951862 + MGP_CBAJ_P0051384 Lcor protein_coding protein_coding MGP_CBAJ_T0051385.1 MGP_CBAJ_G0024834.1 mouse_genomes_project 19 43939370 43949397 + MGP_CBAJ_P0051385 Lcor protein_coding protein_coding MGP_CBAJ_T0051022.1 MGP_CBAJ_G0024710.1 mouse_genomes_project 19 24974645 25217720 + MGP_CBAJ_P0051022 Dock8 protein_coding protein_coding MGP_CBAJ_T0050711.1 MGP_CBAJ_G0024554.1 mouse_genomes_project 19 8244744 8271903 - MGP_CBAJ_P0050711 Sdhaf2 protein_coding protein_coding MGP_CBAJ_T0050728.1 MGP_CBAJ_G0024565.1 mouse_genomes_project 19 8558846 8601674 - MGP_CBAJ_P0050728 Cd6 protein_coding protein_coding MGP_CBAJ_T0050729.1 MGP_CBAJ_G0024565.1 mouse_genomes_project 19 8558851 8570805 - Cd6 protein_coding retained_intron MGP_CBAJ_T0050730.1 MGP_CBAJ_G0024565.1 mouse_genomes_project 19 8558854 8601580 - MGP_CBAJ_P0050730 Cd6 protein_coding protein_coding MGP_CBAJ_T0050731.1 MGP_CBAJ_G0024565.1 mouse_genomes_project 19 8560491 8562494 - Cd6 protein_coding retained_intron MGP_CBAJ_T0050732.1 MGP_CBAJ_G0024565.1 mouse_genomes_project 19 8566634 8601472 - MGP_CBAJ_P0050732 Cd6 protein_coding protein_coding MGP_CBAJ_T0049909.1 MGP_CBAJ_G0024332.1 mouse_genomes_project 19 538672 548207 + MGP_CBAJ_P0049909 1810055G02Rik protein_coding protein_coding MGP_CBAJ_T0051563.1 MGP_CBAJ_G0024895.1 mouse_genomes_project 19 48035466 48039499 + MGP_CBAJ_P0051563 Kazald1 protein_coding protein_coding MGP_CBAJ_T0051564.1 MGP_CBAJ_G0024895.1 mouse_genomes_project 19 48036364 48039499 + MGP_CBAJ_P0051564 Kazald1 protein_coding protein_coding MGP_CBAJ_T0050857.1 MGP_CBAJ_G0024618.1 mouse_genomes_project 19 10546207 10550801 + MGP_CBAJ_P0050857 Mpeg1 protein_coding protein_coding MGP_CBAJ_T0050833.1 MGP_CBAJ_G0024597.1 mouse_genomes_project 19 9593736 9616349 + MGP_CBAJ_P0050833 Oosp3 protein_coding protein_coding MGP_CBAJ_T0050834.1 MGP_CBAJ_G0024597.1 mouse_genomes_project 19 9593759 9616365 + MGP_CBAJ_P0050834 Oosp3 protein_coding protein_coding MGP_CBAJ_T0050037.1 MGP_CBAJ_G0024360.1 mouse_genomes_project 19 1133351 1136612 + MGP_CBAJ_P0050037 Ppp1ca protein_coding protein_coding MGP_CBAJ_T0003777.1 MGP_CBAJ_G0003383.1 mouse_genomes_project 19 3842455 3843769 - Gm14964 antisense antisense MGP_CBAJ_T0003778.1 MGP_CBAJ_G0003383.1 mouse_genomes_project 19 3842533 3843546 - Gm14964 antisense antisense MGP_CBAJ_T0050110.1 MGP_CBAJ_G0024381.1 mouse_genomes_project 19 1865412 1868575 + MGP_CBAJ_P0050110 Ccdc87 protein_coding protein_coding MGP_CBAJ_T0017424.1 MGP_CBAJ_G0015121.1 mouse_genomes_project 19 6224799 6227758 + Snhg1 processed_transcript lincRNA MGP_CBAJ_T0017425.1 MGP_CBAJ_G0015121.1 mouse_genomes_project 19 6224811 6227756 + Snhg1 processed_transcript retained_intron MGP_CBAJ_T0017426.1 MGP_CBAJ_G0015121.1 mouse_genomes_project 19 6224811 6227757 + Snhg1 processed_transcript retained_intron MGP_CBAJ_T0017427.1 MGP_CBAJ_G0015121.1 mouse_genomes_project 19 6225325 6227758 + Snhg1 processed_transcript lincRNA MGP_CBAJ_T0017428.1 MGP_CBAJ_G0015121.1 mouse_genomes_project 19 6225451 6227208 + Snhg1 processed_transcript retained_intron MGP_CBAJ_T0017429.1 MGP_CBAJ_G0015121.1 mouse_genomes_project 19 6225458 6226171 + Snhg1 processed_transcript retained_intron MGP_CBAJ_T0017430.1 MGP_CBAJ_G0015121.1 mouse_genomes_project 19 6225465 6227665 + Snhg1 processed_transcript lincRNA MGP_CBAJ_T0017431.1 MGP_CBAJ_G0015121.1 mouse_genomes_project 19 6225476 6227758 + Snhg1 processed_transcript retained_intron MGP_CBAJ_T0017432.1 MGP_CBAJ_G0015121.1 mouse_genomes_project 19 6225480 6226657 + Snhg1 processed_transcript retained_intron MGP_CBAJ_T0017433.1 MGP_CBAJ_G0015121.1 mouse_genomes_project 19 6225674 6226622 + Snhg1 processed_transcript retained_intron MGP_CBAJ_T0017434.1 MGP_CBAJ_G0015121.1 mouse_genomes_project 19 6225711 6227151 + Snhg1 processed_transcript retained_intron MGP_CBAJ_T0017435.1 MGP_CBAJ_G0015121.1 mouse_genomes_project 19 6225721 6226838 + Snhg1 processed_transcript retained_intron MGP_CBAJ_T0017436.1 MGP_CBAJ_G0015121.1 mouse_genomes_project 19 6225981 6227758 + Snhg1 processed_transcript retained_intron MGP_CBAJ_T0017437.1 MGP_CBAJ_G0015121.1 mouse_genomes_project 19 6226215 6227758 + Snhg1 processed_transcript retained_intron MGP_CBAJ_T0017438.1 MGP_CBAJ_G0015121.1 mouse_genomes_project 19 6226340 6227318 + Snhg1 processed_transcript retained_intron MGP_CBAJ_T0017439.1 MGP_CBAJ_G0015121.1 mouse_genomes_project 19 6226422 6227758 + Snhg1 processed_transcript retained_intron MGP_CBAJ_T0017440.1 MGP_CBAJ_G0015121.1 mouse_genomes_project 19 6226790 6227758 + Snhg1 processed_transcript retained_intron MGP_CBAJ_T0017441.1 MGP_CBAJ_G0015121.1 mouse_genomes_project 19 6226815 6227758 + Snhg1 processed_transcript lincRNA MGP_CBAJ_T0051215.1 MGP_CBAJ_G0024774.1 mouse_genomes_project 19 35982952 35992959 + MGP_CBAJ_P0051215 Ifit1 protein_coding protein_coding MGP_CBAJ_T0051768.1 MGP_CBAJ_G0024962.1 mouse_genomes_project 19 58180513 58197765 - MGP_CBAJ_P0051768 Bbip1 protein_coding protein_coding MGP_CBAJ_T0100320.1 MGP_CBAJ_G0038575.1 mouse_genomes_project 19 18471059 18471191 + Gm25437 snoRNA snoRNA MGP_CBAJ_T0050053.1 MGP_CBAJ_G0024366.1 mouse_genomes_project 19 1244632 1268122 - MGP_CBAJ_P0050053 Adrbk1 protein_coding protein_coding MGP_CBAJ_T0050054.1 MGP_CBAJ_G0024366.1 mouse_genomes_project 19 1244641 1267863 - MGP_CBAJ_P0050054 Adrbk1 protein_coding protein_coding MGP_CBAJ_T0050055.1 MGP_CBAJ_G0024366.1 mouse_genomes_project 19 1244641 1267938 - MGP_CBAJ_P0050055 Adrbk1 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050056.1 MGP_CBAJ_G0024366.1 mouse_genomes_project 19 1244642 1268130 - MGP_CBAJ_P0050056 Adrbk1 protein_coding protein_coding MGP_CBAJ_T0050057.1 MGP_CBAJ_G0024366.1 mouse_genomes_project 19 1245740 1267922 - MGP_CBAJ_P0050057 Adrbk1 protein_coding unknown_likely_coding MGP_CBAJ_T0050058.1 MGP_CBAJ_G0024366.1 mouse_genomes_project 19 1246782 1247956 - Adrbk1 protein_coding retained_intron MGP_CBAJ_T0050059.1 MGP_CBAJ_G0024366.1 mouse_genomes_project 19 1246946 1247947 - MGP_CBAJ_P0050059 Adrbk1 protein_coding protein_coding MGP_CBAJ_T0050060.1 MGP_CBAJ_G0024366.1 mouse_genomes_project 19 1246976 1249036 - MGP_CBAJ_P0050060 Adrbk1 protein_coding protein_coding MGP_CBAJ_T0050061.1 MGP_CBAJ_G0024366.1 mouse_genomes_project 19 1249014 1250364 - Adrbk1 protein_coding retained_intron MGP_CBAJ_T0050062.1 MGP_CBAJ_G0024366.1 mouse_genomes_project 19 1249899 1267935 - Adrbk1 protein_coding retained_intron MGP_CBAJ_T0050063.1 MGP_CBAJ_G0024366.1 mouse_genomes_project 19 1251119 1267112 - MGP_CBAJ_P0050063 Adrbk1 protein_coding protein_coding MGP_CBAJ_T0007014.1 MGP_CBAJ_G0005751.1 mouse_genomes_project 19 64469988 64557668 + 2700089I24Rik lincRNA lincRNA MGP_CBAJ_T0013203.1 MGP_CBAJ_G0011315.1 mouse_genomes_project 19 17654228 17658462 + processed_pseudogene processed_pseudogene MGP_CBAJ_T0010191.1 MGP_CBAJ_G0008329.1 mouse_genomes_project 19 44763750 44763839 - Mir3085 miRNA miRNA MGP_CBAJ_T0098011.1 MGP_CBAJ_G0036284.1 mouse_genomes_project 19 54625965 54626002 + Gm25659 rRNA rRNA MGP_CBAJ_T0049986.1 MGP_CBAJ_G0024348.1 mouse_genomes_project 19 981768 983738 - MGP_CBAJ_P0049986 BC021614 protein_coding protein_coding MGP_CBAJ_T0049987.1 MGP_CBAJ_G0024348.1 mouse_genomes_project 19 981769 983587 - MGP_CBAJ_P0049987 BC021614 protein_coding protein_coding MGP_CBAJ_T0050883.1 MGP_CBAJ_G0024629.1 mouse_genomes_project 19 11007734 11008764 + MGP_CBAJ_P0050883 Olfr1444 protein_coding protein_coding MGP_CBAJ_T0050156.1 MGP_CBAJ_G0024402.1 mouse_genomes_project 19 2376011 2399661 - MGP_CBAJ_P0050156 Sf3b2 protein_coding protein_coding MGP_CBAJ_T0050561.1 MGP_CBAJ_G0024509.1 mouse_genomes_project 19 6109244 6119530 + MGP_CBAJ_P0050561 Slc22a6 protein_coding protein_coding MGP_CBAJ_T0051338.1 MGP_CBAJ_G0024821.1 mouse_genomes_project 19 42469884 42526095 - MGP_CBAJ_P0051338 Pdlim1 protein_coding protein_coding MGP_CBAJ_T0051339.1 MGP_CBAJ_G0024821.1 mouse_genomes_project 19 42471066 42472055 - Pdlim1 protein_coding retained_intron MGP_CBAJ_T0051340.1 MGP_CBAJ_G0024821.1 mouse_genomes_project 19 42471226 42479564 - Pdlim1 protein_coding retained_intron MGP_CBAJ_T0051341.1 MGP_CBAJ_G0024821.1 mouse_genomes_project 19 42479350 42526333 - MGP_CBAJ_P0051341 Pdlim1 protein_coding protein_coding MGP_CBAJ_T0051342.1 MGP_CBAJ_G0024821.1 mouse_genomes_project 19 42499750 42526095 - Pdlim1 protein_coding retained_intron MGP_CBAJ_T0050724.1 MGP_CBAJ_G0024562.1 mouse_genomes_project 19 8430917 8446280 - MGP_CBAJ_P0050724 Pga5 protein_coding unknown_likely_coding MGP_CBAJ_T0050725.1 MGP_CBAJ_G0024562.1 mouse_genomes_project 19 8430921 8439846 - MGP_CBAJ_P0050725 Pga5 protein_coding protein_coding MGP_CBAJ_T0051900.1 MGP_CBAJ_G0025000.1 mouse_genomes_project 19 64429532 64436514 + MGP_CBAJ_P0051900 Emx2 protein_coding protein_coding MGP_CBAJ_T0051901.1 MGP_CBAJ_G0025000.1 mouse_genomes_project 19 64430680 64436510 + MGP_CBAJ_P0051901 Emx2 protein_coding protein_coding MGP_CBAJ_T0051902.1 MGP_CBAJ_G0025000.1 mouse_genomes_project 19 64433856 64435264 + Emx2 protein_coding processed_transcript MGP_CBAJ_T0006954.1 MGP_CBAJ_G0005711.1 mouse_genomes_project 19 2997373 3004356 - Malat1 lincRNA lincRNA MGP_CBAJ_T0006955.1 MGP_CBAJ_G0005711.1 mouse_genomes_project 19 2997374 2999148 - Malat1 lincRNA lincRNA MGP_CBAJ_T0006956.1 MGP_CBAJ_G0005711.1 mouse_genomes_project 19 2997377 2998636 - Malat1 lincRNA lincRNA MGP_CBAJ_T0006957.1 MGP_CBAJ_G0005711.1 mouse_genomes_project 19 3003599 3004355 - Malat1 lincRNA lincRNA MGP_CBAJ_T0006958.1 MGP_CBAJ_G0005711.1 mouse_genomes_project 19 3003626 3004324 - Malat1 lincRNA lincRNA MGP_CBAJ_T0050957.1 MGP_CBAJ_G0024680.1 mouse_genomes_project 19 17764939 17804094 + MGP_CBAJ_P0050957 protein_coding protein_coding MGP_CBAJ_T0006964.1 MGP_CBAJ_G0005715.1 mouse_genomes_project 19 8117442 8120042 - Gm26859 lincRNA lincRNA MGP_CBAJ_T0010171.1 MGP_CBAJ_G0008309.1 mouse_genomes_project 19 6418970 6419046 - Mir5136 miRNA miRNA MGP_CBAJ_T0050044.1 MGP_CBAJ_G0024364.1 mouse_genomes_project 19 1212478 1219983 - MGP_CBAJ_P0050044 Ssh3 protein_coding protein_coding MGP_CBAJ_T0050045.1 MGP_CBAJ_G0024364.1 mouse_genomes_project 19 1212483 1219983 - MGP_CBAJ_P0050045 Ssh3 protein_coding protein_coding MGP_CBAJ_T0050783.1 MGP_CBAJ_G0024582.1 mouse_genomes_project 19 9096585 9105128 - Ms4a5 protein_coding retained_intron MGP_CBAJ_T0050784.1 MGP_CBAJ_G0024582.1 mouse_genomes_project 19 9097213 9109498 - MGP_CBAJ_P0050784 Ms4a5 protein_coding protein_coding MGP_CBAJ_T0050785.1 MGP_CBAJ_G0024582.1 mouse_genomes_project 19 9097213 9109558 - MGP_CBAJ_P0050785 Ms4a5 protein_coding protein_coding MGP_CBAJ_T0050786.1 MGP_CBAJ_G0024582.1 mouse_genomes_project 19 9097508 9105339 - Ms4a5 protein_coding processed_transcript MGP_CBAJ_T0050787.1 MGP_CBAJ_G0024582.1 mouse_genomes_project 19 9100793 9109545 - MGP_CBAJ_P0050787 Ms4a5 protein_coding nonsense_mediated_decay MGP_CBAJ_T0100314.1 MGP_CBAJ_G0038569.1 mouse_genomes_project 19 6226909 6226976 + Gm23246 snoRNA snoRNA MGP_CBAJ_T0051936.1 MGP_CBAJ_G0025013.1 mouse_genomes_project 19 66440438 66446407 - MGP_CBAJ_P0051936 Csf2ra protein_coding protein_coding MGP_CBAJ_T0051689.1 MGP_CBAJ_G0024935.1 mouse_genomes_project 19 50438708 50474768 - MGP_CBAJ_P0051689 Calhm2 protein_coding protein_coding MGP_CBAJ_T0051690.1 MGP_CBAJ_G0024935.1 mouse_genomes_project 19 50468297 50474768 - MGP_CBAJ_P0051690 Calhm2 protein_coding protein_coding MGP_CBAJ_T0050409.1 MGP_CBAJ_G0024468.1 mouse_genomes_project 19 3662859 3676622 + MGP_CBAJ_P0050409 Pygm protein_coding protein_coding MGP_CBAJ_T0050410.1 MGP_CBAJ_G0024468.1 mouse_genomes_project 19 3662875 3676611 + MGP_CBAJ_P0050410 Pygm protein_coding protein_coding MGP_CBAJ_T0050411.1 MGP_CBAJ_G0024468.1 mouse_genomes_project 19 3671164 3672623 + Pygm protein_coding retained_intron MGP_CBAJ_T0050412.1 MGP_CBAJ_G0024468.1 mouse_genomes_project 19 3675657 3676454 + Pygm protein_coding retained_intron MGP_CBAJ_T0051691.1 MGP_CBAJ_G0024936.1 mouse_genomes_project 19 50477504 50480673 - MGP_CBAJ_P0051691 Calhm1 protein_coding protein_coding MGP_CBAJ_T0050204.1 MGP_CBAJ_G0024418.1 mouse_genomes_project 19 2629096 2632641 + MGP_CBAJ_P0050204 Cfl1 protein_coding protein_coding MGP_CBAJ_T0050930.1 MGP_CBAJ_G0024669.1 mouse_genomes_project 19 14634578 14671829 - MGP_CBAJ_P0050930 Cep78 protein_coding protein_coding MGP_CBAJ_T0050896.1 MGP_CBAJ_G0024642.1 mouse_genomes_project 19 11357944 11358883 + MGP_CBAJ_P0050896 Olfr1461 protein_coding protein_coding MGP_CBAJ_T0050112.1 MGP_CBAJ_G0024383.1 mouse_genomes_project 19 1893529 1895864 - Actn3 protein_coding processed_transcript MGP_CBAJ_T0050113.1 MGP_CBAJ_G0024383.1 mouse_genomes_project 19 1893529 1916125 - MGP_CBAJ_P0050113 Actn3 protein_coding protein_coding MGP_CBAJ_T0049953.1 MGP_CBAJ_G0024336.1 mouse_genomes_project 19 785776 789624 - MGP_CBAJ_P0049953 Ndufs8 protein_coding protein_coding MGP_CBAJ_T0050024.1 MGP_CBAJ_G0024356.1 mouse_genomes_project 19 1090097 1092243 + MGP_CBAJ_P0050024 Ptprcap protein_coding protein_coding MGP_CBAJ_T0051309.1 MGP_CBAJ_G0024806.1 mouse_genomes_project 19 40968706 41015988 + MGP_CBAJ_P0051309 Hells protein_coding protein_coding MGP_CBAJ_T0051310.1 MGP_CBAJ_G0024806.1 mouse_genomes_project 19 40968821 40981144 + Hells protein_coding retained_intron MGP_CBAJ_T0051311.1 MGP_CBAJ_G0024806.1 mouse_genomes_project 19 40968965 40987165 + MGP_CBAJ_P0051311 Hells protein_coding protein_coding MGP_CBAJ_T0051312.1 MGP_CBAJ_G0024806.1 mouse_genomes_project 19 40969181 40996922 + Hells protein_coding processed_transcript MGP_CBAJ_T0051313.1 MGP_CBAJ_G0024806.1 mouse_genomes_project 19 40972299 40981245 + Hells protein_coding retained_intron MGP_CBAJ_T0051314.1 MGP_CBAJ_G0024806.1 mouse_genomes_project 19 40986939 40993726 + Hells protein_coding processed_transcript MGP_CBAJ_T0099081.1 MGP_CBAJ_G0037336.1 mouse_genomes_project 19 57239499 57239606 - Gm24724 snRNA snRNA MGP_CBAJ_T0049910.1 MGP_CBAJ_G0024333.1 mouse_genomes_project 19 612898 672737 + MGP_CBAJ_P0049910 Suv420h1 protein_coding protein_coding MGP_CBAJ_T0049911.1 MGP_CBAJ_G0024333.1 mouse_genomes_project 19 612898 670826 + MGP_CBAJ_P0049911 Suv420h1 protein_coding protein_coding MGP_CBAJ_T0049912.1 MGP_CBAJ_G0024333.1 mouse_genomes_project 19 612898 663254 + MGP_CBAJ_P0049912 Suv420h1 protein_coding protein_coding MGP_CBAJ_T0049913.1 MGP_CBAJ_G0024333.1 mouse_genomes_project 19 612898 672738 + MGP_CBAJ_P0049913 Suv420h1 protein_coding protein_coding MGP_CBAJ_T0049914.1 MGP_CBAJ_G0024333.1 mouse_genomes_project 19 612898 670826 + MGP_CBAJ_P0049914 Suv420h1 protein_coding protein_coding MGP_CBAJ_T0049915.1 MGP_CBAJ_G0024333.1 mouse_genomes_project 19 613000 659616 + MGP_CBAJ_P0049915 Suv420h1 protein_coding protein_coding MGP_CBAJ_T0049916.1 MGP_CBAJ_G0024333.1 mouse_genomes_project 19 613510 663260 + MGP_CBAJ_P0049916 Suv420h1 protein_coding protein_coding MGP_CBAJ_T0049917.1 MGP_CBAJ_G0024333.1 mouse_genomes_project 19 613595 658349 + MGP_CBAJ_P0049917 Suv420h1 protein_coding protein_coding MGP_CBAJ_T0049918.1 MGP_CBAJ_G0024333.1 mouse_genomes_project 19 613611 628361 + Suv420h1 protein_coding retained_intron MGP_CBAJ_T0049919.1 MGP_CBAJ_G0024333.1 mouse_genomes_project 19 613626 657794 + MGP_CBAJ_P0049919 Suv420h1 protein_coding protein_coding MGP_CBAJ_T0049920.1 MGP_CBAJ_G0024333.1 mouse_genomes_project 19 613643 671123 + MGP_CBAJ_P0049920 Suv420h1 protein_coding protein_coding MGP_CBAJ_T0049921.1 MGP_CBAJ_G0024333.1 mouse_genomes_project 19 613646 638849 + MGP_CBAJ_P0049921 Suv420h1 protein_coding protein_coding MGP_CBAJ_T0049922.1 MGP_CBAJ_G0024333.1 mouse_genomes_project 19 613695 663232 + MGP_CBAJ_P0049922 Suv420h1 protein_coding protein_coding MGP_CBAJ_T0049923.1 MGP_CBAJ_G0024333.1 mouse_genomes_project 19 613710 638867 + MGP_CBAJ_P0049923 Suv420h1 protein_coding protein_coding MGP_CBAJ_T0049924.1 MGP_CBAJ_G0024333.1 mouse_genomes_project 19 614024 642342 + MGP_CBAJ_P0049924 Suv420h1 protein_coding protein_coding MGP_CBAJ_T0049925.1 MGP_CBAJ_G0024333.1 mouse_genomes_project 19 637401 645202 + Suv420h1 protein_coding retained_intron MGP_CBAJ_T0049926.1 MGP_CBAJ_G0024333.1 mouse_genomes_project 19 657685 660694 + Suv420h1 protein_coding retained_intron MGP_CBAJ_T0050470.1 MGP_CBAJ_G0024477.1 mouse_genomes_project 19 4153152 4156151 - MGP_CBAJ_P0050470 Tex40 protein_coding protein_coding MGP_CBAJ_T0011358.1 MGP_CBAJ_G0009496.1 mouse_genomes_project 19 63670107 63670191 - Gm22561 misc_RNA misc_RNA MGP_CBAJ_T0050084.1 MGP_CBAJ_G0024371.1 mouse_genomes_project 19 1512965 1617367 + MGP_CBAJ_P0050084 Pcx protein_coding unknown_likely_coding MGP_CBAJ_T0050085.1 MGP_CBAJ_G0024371.1 mouse_genomes_project 19 1513083 1628353 + MGP_CBAJ_P0050085 Pcx protein_coding protein_coding MGP_CBAJ_T0050086.1 MGP_CBAJ_G0024371.1 mouse_genomes_project 19 1601000 1628353 + MGP_CBAJ_P0050086 Pcx protein_coding protein_coding MGP_CBAJ_T0013220.1 MGP_CBAJ_G0011332.1 mouse_genomes_project 19 61415575 61415923 - processed_pseudogene processed_pseudogene MGP_CBAJ_T0006974.1 MGP_CBAJ_G0005724.1 mouse_genomes_project 19 25787191 25788291 - 2610016A17Rik lincRNA lincRNA MGP_CBAJ_T0006975.1 MGP_CBAJ_G0005724.1 mouse_genomes_project 19 25787229 25788274 - 2610016A17Rik lincRNA lincRNA MGP_CBAJ_T0006976.1 MGP_CBAJ_G0005724.1 mouse_genomes_project 19 25787622 25788305 - 2610016A17Rik lincRNA lincRNA MGP_CBAJ_T0050490.1 MGP_CBAJ_G0024486.1 mouse_genomes_project 19 4237757 4240887 - MGP_CBAJ_P0050490 Nudt22 protein_coding protein_coding MGP_CBAJ_T0050491.1 MGP_CBAJ_G0024486.1 mouse_genomes_project 19 4237757 4240807 - MGP_CBAJ_P0050491 Nudt22 protein_coding protein_coding MGP_CBAJ_T0050492.1 MGP_CBAJ_G0024486.1 mouse_genomes_project 19 4237758 4239646 - Nudt22 protein_coding retained_intron MGP_CBAJ_T0051030.1 MGP_CBAJ_G0024713.1 mouse_genomes_project 19 25724347 25737707 + MGP_CBAJ_P0051030 Dmrt3 protein_coding protein_coding MGP_CBAJ_T0051750.1 MGP_CBAJ_G0024954.1 mouse_genomes_project 19 57220193 57342885 + MGP_CBAJ_P0051750 Add3 protein_coding protein_coding MGP_CBAJ_T0051751.1 MGP_CBAJ_G0024954.1 mouse_genomes_project 19 57222504 57342885 + MGP_CBAJ_P0051751 Add3 protein_coding protein_coding MGP_CBAJ_T0051752.1 MGP_CBAJ_G0024954.1 mouse_genomes_project 19 57223737 57342885 + MGP_CBAJ_P0051752 Add3 protein_coding protein_coding MGP_CBAJ_T0017421.1 MGP_CBAJ_G0015119.1 mouse_genomes_project 19 3687559 3696763 - Gm14965 processed_transcript antisense MGP_CBAJ_T0017422.1 MGP_CBAJ_G0015119.1 mouse_genomes_project 19 3694965 3696763 - Gm14965 processed_transcript retained_intron MGP_CBAJ_T0050245.1 MGP_CBAJ_G0024433.1 mouse_genomes_project 19 2924840 2945497 + MGP_CBAJ_P0050245 Ltbp3 protein_coding protein_coding MGP_CBAJ_T0050025.1 MGP_CBAJ_G0024357.1 mouse_genomes_project 19 1092277 1098718 - MGP_CBAJ_P0050025 Rps6kb2 protein_coding protein_coding MGP_CBAJ_T0050026.1 MGP_CBAJ_G0024357.1 mouse_genomes_project 19 1092283 1098769 - MGP_CBAJ_P0050026 Rps6kb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050027.1 MGP_CBAJ_G0024357.1 mouse_genomes_project 19 1092286 1098789 - Rps6kb2 protein_coding retained_intron MGP_CBAJ_T0050028.1 MGP_CBAJ_G0024357.1 mouse_genomes_project 19 1092286 1093644 - Rps6kb2 protein_coding retained_intron MGP_CBAJ_T0050029.1 MGP_CBAJ_G0024357.1 mouse_genomes_project 19 1092286 1098773 - MGP_CBAJ_P0050029 Rps6kb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050030.1 MGP_CBAJ_G0024357.1 mouse_genomes_project 19 1092477 1097803 - Rps6kb2 protein_coding processed_transcript MGP_CBAJ_T0050031.1 MGP_CBAJ_G0024357.1 mouse_genomes_project 19 1092477 1098758 - MGP_CBAJ_P0050031 Rps6kb2 protein_coding nonsense_mediated_decay MGP_CBAJ_T0050032.1 MGP_CBAJ_G0024357.1 mouse_genomes_project 19 1097732 1098773 - Rps6kb2 protein_coding processed_transcript MGP_CBAJ_T0050033.1 MGP_CBAJ_G0024357.1 mouse_genomes_project 19 1097989 1098803 - Rps6kb2 protein_coding retained_intron MGP_CBAJ_T0050034.1 MGP_CBAJ_G0024357.1 mouse_genomes_project 19 1098287 1098827 - Rps6kb2 protein_coding processed_transcript MGP_CBAJ_T0010177.1 MGP_CBAJ_G0008315.1 mouse_genomes_project 19 22408073 22408141 + Mir204 miRNA miRNA MGP_CBAJ_T0010168.1 MGP_CBAJ_G0008306.1 mouse_genomes_project 19 4723199 4723269 + Mir6991 miRNA miRNA MGP_CBAJ_T0049955.1 MGP_CBAJ_G0024338.1 mouse_genomes_project 19 817899 835050 + MGP_CBAJ_P0049955 Unc93b1 protein_coding protein_coding MGP_CBAJ_T0049956.1 MGP_CBAJ_G0024338.1 mouse_genomes_project 19 817939 819460 + Unc93b1 protein_coding retained_intron MGP_CBAJ_T0049957.1 MGP_CBAJ_G0024338.1 mouse_genomes_project 19 817970 835053 + MGP_CBAJ_P0049957 Unc93b1 protein_coding protein_coding MGP_CBAJ_T0049958.1 MGP_CBAJ_G0024338.1 mouse_genomes_project 19 828152 835050 + Unc93b1 protein_coding retained_intron MGP_CBAJ_T0051088.1 MGP_CBAJ_G0024724.1 mouse_genomes_project 19 29485936 29488795 + MGP_CBAJ_P0051088 Plpp6 protein_coding protein_coding MGP_CBAJ_T0051283.1 MGP_CBAJ_G0024797.1 mouse_genomes_project 19 39961069 39980235 + MGP_CBAJ_P0051283 Ffar4 protein_coding protein_coding MGP_CBAJ_T0050349.1 MGP_CBAJ_G0024462.1 mouse_genomes_project 19 3510619 3534563 + MGP_CBAJ_P0050349 Atg2a protein_coding protein_coding MGP_CBAJ_T0050350.1 MGP_CBAJ_G0024462.1 mouse_genomes_project 19 3514408 3534523 + MGP_CBAJ_P0050350 Atg2a protein_coding protein_coding MGP_CBAJ_T0050351.1 MGP_CBAJ_G0024462.1 mouse_genomes_project 19 3519912 3520720 + Atg2a protein_coding retained_intron MGP_CBAJ_T0050352.1 MGP_CBAJ_G0024462.1 mouse_genomes_project 19 3524795 3528049 + Atg2a protein_coding retained_intron MGP_CBAJ_T0050353.1 MGP_CBAJ_G0024462.1 mouse_genomes_project 19 3526769 3532359 + Atg2a protein_coding retained_intron MGP_CBAJ_T0050983.1 MGP_CBAJ_G0024690.1 mouse_genomes_project 19 21097633 21099617 + MGP_CBAJ_P0050983 Gm3443 protein_coding protein_coding MGP_CBAJ_T0051229.1 MGP_CBAJ_G0024781.1 mouse_genomes_project 19 37980239 38071762 + MGP_CBAJ_P0051229 Pcgf5 protein_coding protein_coding MGP_CBAJ_T0051230.1 MGP_CBAJ_G0024781.1 mouse_genomes_project 19 38022666 38071762 + MGP_CBAJ_P0051230 Pcgf5 protein_coding protein_coding MGP_CBAJ_T0011352.1 MGP_CBAJ_G0009490.1 mouse_genomes_project 19 31486700 31487018 + Gm23426 misc_RNA misc_RNA MGP_CBAJ_T0050495.1 MGP_CBAJ_G0024489.1 mouse_genomes_project 19 4275127 4302011 - MGP_CBAJ_P0050495 Stip1 protein_coding protein_coding MGP_CBAJ_T0051446.1 MGP_CBAJ_G0024856.1 mouse_genomes_project 19 44766698 44921333 - MGP_CBAJ_P0051446 Crtac1 protein_coding protein_coding MGP_CBAJ_T0050089.1 MGP_CBAJ_G0024373.1 mouse_genomes_project 19 1629151 1632222 - MGP_CBAJ_P0050089 Rce1 protein_coding protein_coding MGP_CBAJ_T0050886.1 MGP_CBAJ_G0024632.1 mouse_genomes_project 19 11070399 11071502 - MGP_CBAJ_P0050886 Olfr1447 protein_coding protein_coding MGP_CBAJ_T0051356.1 MGP_CBAJ_G0024824.1 mouse_genomes_project 19 42884778 42903417 - MGP_CBAJ_P0051356 Tctn3 protein_coding protein_coding MGP_CBAJ_T0051357.1 MGP_CBAJ_G0024824.1 mouse_genomes_project 19 42896273 42903387 - MGP_CBAJ_P0051357 Tctn3 protein_coding protein_coding MGP_CBAJ_T0051358.1 MGP_CBAJ_G0024824.1 mouse_genomes_project 19 42898300 42903384 - MGP_CBAJ_P0051358 Tctn3 protein_coding protein_coding MGP_CBAJ_T0051359.1 MGP_CBAJ_G0024824.1 mouse_genomes_project 19 42902308 42903372 - Tctn3 protein_coding retained_intron MGP_CBAJ_T0050835.1 MGP_CBAJ_G0024598.1 mouse_genomes_project 19 9654556 9670899 + MGP_CBAJ_P0050835 Gif protein_coding protein_coding MGP_CBAJ_T0100332.1 MGP_CBAJ_G0038587.1 mouse_genomes_project 19 49549842 49549951 + Gm24610 snoRNA snoRNA MGP_CBAJ_T0010166.1 MGP_CBAJ_G0008304.1 mouse_genomes_project 19 4052042 4052101 - Mir5046 miRNA miRNA MGP_CBAJ_T0050043.1 MGP_CBAJ_G0024363.1 mouse_genomes_project 19 1176874 1178599 + MGP_CBAJ_P0050043 Pold4 protein_coding protein_coding MGP_CBAJ_T0050859.1 MGP_CBAJ_G0024620.1 mouse_genomes_project 19 10670385 10693814 + MGP_CBAJ_P0050859 Fam111a protein_coding protein_coding MGP_CBAJ_T0050860.1 MGP_CBAJ_G0024620.1 mouse_genomes_project 19 10670385 10693822 + MGP_CBAJ_P0050860 Fam111a protein_coding protein_coding MGP_CBAJ_T0050861.1 MGP_CBAJ_G0024620.1 mouse_genomes_project 19 10675710 10693816 + MGP_CBAJ_P0050861 Fam111a protein_coding protein_coding MGP_CBAJ_T0050755.1 MGP_CBAJ_G0024570.1 mouse_genomes_project 19 8709090 8711094 - MGP_CBAJ_P0050755 Zp1 protein_coding protein_coding MGP_CBAJ_T0050756.1 MGP_CBAJ_G0024570.1 mouse_genomes_project 19 8709092 8715429 - MGP_CBAJ_P0050756 Zp1 protein_coding protein_coding MGP_CBAJ_T0050918.1 MGP_CBAJ_G0024664.1 mouse_genomes_project 19 12236784 12237809 - MGP_CBAJ_P0050918 Olfr1500 protein_coding protein_coding MGP_CBAJ_T0051883.1 MGP_CBAJ_G0024988.1 mouse_genomes_project 19 63351078 63393142 + MGP_CBAJ_P0051883 Ccdc172 protein_coding protein_coding MGP_CBAJ_T0100317.1 MGP_CBAJ_G0038572.1 mouse_genomes_project 19 9499856 9499906 - Gm24599 snoRNA snoRNA MGP_CBAJ_T0010194.1 MGP_CBAJ_G0008332.1 mouse_genomes_project 19 47707521 47707645 + Mir6405 miRNA miRNA MGP_CBAJ_T0050493.1 MGP_CBAJ_G0024487.1 mouse_genomes_project 19 4240900 4243814 + MGP_CBAJ_P0050493 Trpt1 protein_coding protein_coding MGP_CBAJ_T0099075.1 MGP_CBAJ_G0037330.1 mouse_genomes_project 19 44426110 44426209 + Gm23113 snRNA snRNA MGP_CBAJ_T0051738.1 MGP_CBAJ_G0024952.1 mouse_genomes_project 19 56208274 56209408 + MGP_CBAJ_P0051738 Ins1 protein_coding protein_coding MGP_CBAJ_T0010175.1 MGP_CBAJ_G0008313.1 mouse_genomes_project 19 15045334 15045447 - Mir496b miRNA miRNA